Query 014934
Match_columns 415
No_of_seqs 676 out of 3520
Neff 9.1
Searched_HMMs 29240
Date Mon Mar 25 03:44:05 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014934.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/014934hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gga_A P55CDC, cell division c 100.0 1.2E-51 4E-56 409.0 41.7 349 51-414 2-357 (420)
2 4aez_A CDC20, WD repeat-contai 100.0 5.1E-49 1.7E-53 387.5 42.1 337 47-411 1-337 (401)
3 4ggc_A P55CDC, cell division c 100.0 1.5E-41 5.2E-46 321.0 41.2 270 145-414 3-277 (318)
4 4gqb_B Methylosome protein 50; 100.0 1.4E-39 4.6E-44 314.5 35.8 241 167-411 82-332 (344)
5 2ynn_A Coatomer subunit beta'; 100.0 4.8E-37 1.6E-41 290.9 37.2 240 169-413 15-262 (304)
6 4g56_B MGC81050 protein; prote 100.0 4.2E-38 1.4E-42 305.4 30.2 242 167-412 94-345 (357)
7 1vyh_C Platelet-activating fac 100.0 5E-37 1.7E-41 303.3 36.0 240 168-413 109-372 (410)
8 3ow8_A WD repeat-containing pr 100.0 7E-37 2.4E-41 292.5 35.7 236 167-409 80-320 (321)
9 1got_B GT-beta; complex (GTP-b 100.0 6E-36 2.1E-40 287.9 39.5 239 168-413 56-304 (340)
10 3ow8_A WD repeat-containing pr 100.0 2.8E-36 9.5E-41 288.3 34.3 242 166-413 31-282 (321)
11 1vyh_C Platelet-activating fac 100.0 4.2E-36 1.4E-40 296.7 34.4 235 168-409 151-410 (410)
12 3iz6_a 40S ribosomal protein R 100.0 1.9E-35 6.6E-40 288.8 33.1 242 168-415 67-380 (380)
13 2pbi_B Guanine nucleotide-bind 100.0 3.1E-34 1.1E-38 277.8 40.4 233 169-407 66-354 (354)
14 1got_B GT-beta; complex (GTP-b 100.0 2.8E-34 9.6E-39 276.2 37.5 232 168-407 98-340 (340)
15 4gqb_B Methylosome protein 50; 100.0 2.7E-35 9.2E-40 284.4 29.1 238 169-412 32-291 (344)
16 2pm7_B Protein transport prote 100.0 1.9E-34 6.6E-39 272.1 33.7 237 168-409 10-284 (297)
17 3frx_A Guanine nucleotide-bind 100.0 3.4E-34 1.2E-38 273.3 35.4 236 167-411 17-268 (319)
18 1erj_A Transcriptional repress 100.0 5.1E-34 1.8E-38 280.0 36.7 239 166-412 122-391 (393)
19 3frx_A Guanine nucleotide-bind 100.0 7.7E-34 2.6E-38 270.8 36.6 234 168-411 66-318 (319)
20 2ynn_A Coatomer subunit beta'; 100.0 9.6E-34 3.3E-38 268.2 36.4 236 168-410 56-302 (304)
21 4ery_A WD repeat-containing pr 100.0 1.8E-33 6.2E-38 266.4 38.1 240 167-413 23-271 (312)
22 1erj_A Transcriptional repress 100.0 9.2E-34 3.1E-38 278.2 36.5 241 167-414 64-345 (393)
23 1nr0_A Actin interacting prote 100.0 7E-34 2.4E-38 294.9 36.9 236 170-412 21-357 (611)
24 3fm0_A Protein CIAO1; WDR39,SG 100.0 5.7E-34 2E-38 274.7 33.4 238 169-411 18-284 (345)
25 2hes_X YDR267CP; beta-propelle 100.0 6.9E-34 2.4E-38 272.5 33.3 238 168-411 15-281 (330)
26 4ery_A WD repeat-containing pr 100.0 6.7E-33 2.3E-37 262.5 36.9 239 168-409 66-311 (312)
27 3fm0_A Protein CIAO1; WDR39,SG 100.0 3.2E-33 1.1E-37 269.5 34.3 243 167-414 61-339 (345)
28 2hes_X YDR267CP; beta-propelle 100.0 2.6E-33 9E-38 268.4 32.6 237 167-410 58-328 (330)
29 2xzm_R RACK1; ribosome, transl 100.0 5E-33 1.7E-37 267.7 34.0 234 168-412 77-342 (343)
30 3bg1_A Protein SEC13 homolog; 100.0 3.7E-34 1.3E-38 272.7 25.4 238 167-409 13-292 (316)
31 4g56_B MGC81050 protein; prote 100.0 7.3E-34 2.5E-38 275.5 27.2 241 167-413 42-304 (357)
32 1gxr_A ESG1, transducin-like e 100.0 1.9E-32 6.4E-37 260.2 36.1 241 167-414 51-300 (337)
33 2xzm_R RACK1; ribosome, transl 100.0 2.5E-32 8.7E-37 262.7 36.2 235 168-412 22-287 (343)
34 1gxr_A ESG1, transducin-like e 100.0 2.4E-31 8.3E-36 252.5 38.9 233 167-408 97-335 (337)
35 3f3f_A Nucleoporin SEH1; struc 100.0 4.1E-32 1.4E-36 257.7 32.7 241 168-413 12-340 (351)
36 3dm0_A Maltose-binding peripla 100.0 6.1E-32 2.1E-36 284.3 36.3 239 167-413 382-635 (694)
37 3jrp_A Fusion protein of prote 100.0 1.9E-32 6.6E-37 264.4 29.9 238 168-410 12-287 (379)
38 2ymu_A WD-40 repeat protein; u 100.0 9.1E-32 3.1E-36 275.6 36.0 228 168-407 345-577 (577)
39 3zwl_B Eukaryotic translation 100.0 3.4E-31 1.2E-35 254.4 37.6 255 150-413 17-307 (369)
40 1k8k_C P40, ARP2/3 complex 41 100.0 7.6E-32 2.6E-36 260.0 32.9 236 168-410 9-274 (372)
41 1sq9_A Antiviral protein SKI8; 100.0 3E-32 1E-36 265.7 29.7 239 167-413 16-325 (397)
42 1nr0_A Actin interacting prote 100.0 1.2E-31 4.2E-36 278.1 35.4 238 167-410 147-522 (611)
43 3dw8_B Serine/threonine-protei 100.0 1.9E-32 6.6E-37 271.3 27.9 242 164-413 25-376 (447)
44 3dwl_C Actin-related protein 2 100.0 2E-33 6.8E-38 272.6 19.3 233 169-409 13-280 (377)
45 4aez_A CDC20, WD repeat-contai 100.0 4.6E-31 1.6E-35 259.3 35.9 241 166-414 133-384 (401)
46 2j04_B YDR362CP, TAU91; beta p 100.0 7.5E-33 2.6E-37 281.5 23.8 238 168-410 134-428 (524)
47 3dm0_A Maltose-binding peripla 100.0 3.4E-31 1.2E-35 278.6 37.1 235 167-410 430-693 (694)
48 3k26_A Polycomb protein EED; W 100.0 4.2E-32 1.4E-36 260.8 27.3 236 167-410 69-366 (366)
49 3vl1_A 26S proteasome regulato 100.0 3.3E-32 1.1E-36 267.7 27.0 236 170-413 59-325 (420)
50 4aow_A Guanine nucleotide-bind 100.0 9.8E-31 3.4E-35 249.1 36.2 239 167-412 38-288 (340)
51 3vl1_A 26S proteasome regulato 100.0 9E-32 3.1E-36 264.5 29.8 235 170-411 100-366 (420)
52 3i2n_A WD repeat-containing pr 100.0 5.8E-32 2E-36 259.1 27.4 242 167-414 65-357 (357)
53 3v7d_B Cell division control p 100.0 7.7E-31 2.6E-35 261.8 36.6 238 167-414 162-425 (464)
54 2aq5_A Coronin-1A; WD40 repeat 100.0 1.8E-31 6.1E-36 262.0 30.4 242 168-413 35-302 (402)
55 2pm9_A Protein WEB1, protein t 100.0 2.4E-32 8.1E-37 267.9 23.9 242 169-414 14-298 (416)
56 4h5i_A Guanine nucleotide-exch 100.0 2.1E-31 7E-36 259.1 30.1 196 209-411 134-344 (365)
57 1r5m_A SIR4-interacting protei 100.0 5.9E-31 2E-35 257.6 33.6 237 167-412 108-363 (425)
58 3mkq_A Coatomer beta'-subunit; 100.0 3.8E-31 1.3E-35 281.9 34.6 239 169-413 15-262 (814)
59 1sq9_A Antiviral protein SKI8; 100.0 1.1E-31 3.9E-36 261.6 27.7 239 167-412 62-397 (397)
60 3v7d_B Cell division control p 100.0 1.4E-30 4.7E-35 260.0 36.0 234 169-413 124-384 (464)
61 4aow_A Guanine nucleotide-bind 100.0 4E-30 1.4E-34 244.9 37.6 238 167-413 86-340 (340)
62 3odt_A Protein DOA1; ubiquitin 100.0 1.5E-30 5E-35 244.7 33.9 233 168-413 19-258 (313)
63 2xyi_A Probable histone-bindin 100.0 2.7E-31 9.2E-36 263.7 30.4 238 168-410 129-410 (430)
64 3i2n_A WD repeat-containing pr 100.0 1.5E-31 5.2E-36 256.2 27.5 239 167-411 18-292 (357)
65 2pm9_A Protein WEB1, protein t 100.0 1.7E-31 5.7E-36 261.8 27.8 240 167-413 67-340 (416)
66 3k26_A Polycomb protein EED; W 100.0 1.2E-31 4.1E-36 257.5 26.1 238 167-412 18-320 (366)
67 1k8k_C P40, ARP2/3 complex 41 100.0 1.9E-31 6.6E-36 257.2 27.4 243 167-415 52-366 (372)
68 3ei3_B DNA damage-binding prot 100.0 1.1E-30 3.7E-35 254.3 31.2 235 168-413 74-342 (383)
69 3ei3_B DNA damage-binding prot 100.0 1.1E-30 3.7E-35 254.3 31.0 234 167-410 118-382 (383)
70 4a11_B DNA excision repair pro 100.0 5.4E-30 1.9E-34 249.7 36.0 240 168-414 44-369 (408)
71 1pgu_A Actin interacting prote 100.0 1.5E-30 5.3E-35 267.6 33.4 237 167-413 18-286 (615)
72 3zwl_B Eukaryotic translation 100.0 9.4E-30 3.2E-34 244.3 36.7 237 167-411 74-347 (369)
73 4e54_B DNA damage-binding prot 100.0 1.9E-31 6.4E-36 265.1 25.5 242 167-413 119-390 (435)
74 2ymu_A WD-40 repeat protein; u 100.0 3.8E-30 1.3E-34 263.5 35.7 230 168-409 304-538 (577)
75 3gre_A Serine/threonine-protei 100.0 2.2E-31 7.5E-36 263.7 25.6 241 167-413 63-362 (437)
76 1p22_A F-BOX/WD-repeat protein 100.0 6.6E-30 2.2E-34 253.7 35.6 230 168-411 134-366 (435)
77 2pm7_B Protein transport prote 100.0 2.8E-30 9.6E-35 243.5 29.9 202 206-411 7-239 (297)
78 3iz6_a 40S ribosomal protein R 100.0 6.6E-31 2.3E-35 256.6 26.5 215 192-413 51-332 (380)
79 4gga_A P55CDC, cell division c 100.0 1.4E-29 4.7E-34 250.4 35.3 239 167-412 147-397 (420)
80 2vdu_B TRNA (guanine-N(7)-)-me 100.0 4.1E-30 1.4E-34 256.5 31.4 235 169-408 6-337 (450)
81 1r5m_A SIR4-interacting protei 100.0 2.6E-30 9E-35 253.0 29.1 234 167-409 149-424 (425)
82 2pbi_B Guanine nucleotide-bind 100.0 9.7E-30 3.3E-34 246.1 32.2 208 201-413 58-274 (354)
83 3odt_A Protein DOA1; ubiquitin 100.0 3.2E-29 1.1E-33 235.6 34.7 231 167-413 59-299 (313)
84 2aq5_A Coronin-1A; WD40 repeat 100.0 2.7E-30 9.3E-35 253.6 27.7 237 167-411 81-343 (402)
85 2ovr_B FBW7, F-BOX/WD repeat p 100.0 3.9E-29 1.3E-33 248.6 36.5 232 167-411 199-443 (445)
86 1yfq_A Cell cycle arrest prote 100.0 4.3E-30 1.5E-34 245.1 28.0 234 168-413 12-285 (342)
87 2j04_B YDR362CP, TAU91; beta p 100.0 1.1E-30 3.6E-35 265.7 24.5 234 169-410 209-517 (524)
88 3mmy_A MRNA export factor; mRN 100.0 1.2E-29 4.1E-34 243.5 30.1 234 167-407 39-343 (368)
89 2ovr_B FBW7, F-BOX/WD repeat p 100.0 5.6E-29 1.9E-33 247.5 35.9 231 168-413 120-351 (445)
90 3jro_A Fusion protein of prote 100.0 2.1E-30 7E-35 275.2 26.7 239 168-411 10-286 (753)
91 3sfz_A APAF-1, apoptotic pepti 100.0 2.9E-29 1E-33 279.6 36.0 237 167-410 615-913 (1249)
92 1p22_A F-BOX/WD-repeat protein 100.0 2.1E-29 7.2E-34 250.1 30.7 231 167-412 173-416 (435)
93 4e54_B DNA damage-binding prot 100.0 2.1E-30 7.2E-35 257.5 23.3 243 167-413 164-433 (435)
94 3dwl_C Actin-related protein 2 100.0 2.1E-30 7.1E-35 251.3 20.8 234 167-408 55-377 (377)
95 3bg1_A Protein SEC13 homolog; 100.0 4E-30 1.4E-34 244.8 21.0 202 205-410 10-247 (316)
96 3lrv_A PRE-mRNA-splicing facto 100.0 1.7E-29 5.9E-34 242.8 24.6 222 178-412 48-294 (343)
97 4ggc_A P55CDC, cell division c 100.0 7.6E-28 2.6E-32 226.9 34.9 239 167-412 67-317 (318)
98 3dw8_B Serine/threonine-protei 100.0 3.8E-29 1.3E-33 247.6 26.5 233 168-408 94-444 (447)
99 3mkq_A Coatomer beta'-subunit; 100.0 3.7E-28 1.3E-32 258.8 34.9 240 167-412 55-304 (814)
100 3jrp_A Fusion protein of prote 100.0 1.4E-28 4.9E-33 237.2 28.8 208 199-412 3-242 (379)
101 2vdu_B TRNA (guanine-N(7)-)-me 100.0 3.6E-28 1.2E-32 242.3 32.4 238 168-410 103-391 (450)
102 3vu4_A KMHSV2; beta-propeller 100.0 3.3E-28 1.1E-32 235.5 30.8 229 168-411 20-272 (355)
103 4gq1_A NUP37; propeller, trans 100.0 3.6E-29 1.2E-33 245.6 23.4 234 174-412 96-391 (393)
104 3gre_A Serine/threonine-protei 100.0 3.5E-29 1.2E-33 247.9 23.0 234 167-407 111-437 (437)
105 1yfq_A Cell cycle arrest prote 100.0 2.5E-28 8.6E-33 232.8 28.0 225 167-402 56-315 (342)
106 1pgu_A Actin interacting prote 100.0 8.7E-28 3E-32 247.1 31.8 234 168-412 64-330 (615)
107 2xyi_A Probable histone-bindin 100.0 4.8E-28 1.7E-32 240.2 28.3 212 196-411 116-354 (430)
108 4h5i_A Guanine nucleotide-exch 100.0 6.5E-28 2.2E-32 234.4 27.2 196 167-368 133-344 (365)
109 2j04_A TAU60, YPL007P, hypothe 100.0 3.6E-28 1.2E-32 243.9 25.8 227 169-409 17-296 (588)
110 3sfz_A APAF-1, apoptotic pepti 100.0 6.8E-29 2.3E-33 276.6 22.7 237 168-414 962-1211(1249)
111 2w18_A PALB2, fancn, partner a 100.0 1.5E-27 5.2E-32 225.8 28.2 241 160-409 32-356 (356)
112 4a11_B DNA excision repair pro 100.0 4.3E-28 1.5E-32 236.2 25.1 221 186-413 22-279 (408)
113 2oaj_A Protein SNI1; WD40 repe 100.0 4.1E-27 1.4E-31 254.2 32.9 232 168-408 18-310 (902)
114 3f3f_A Nucleoporin SEH1; struc 100.0 3.2E-27 1.1E-31 223.9 27.9 203 205-411 8-250 (351)
115 3lrv_A PRE-mRNA-splicing facto 100.0 1.5E-27 5.1E-32 229.2 25.9 231 170-409 79-332 (343)
116 2oaj_A Protein SNI1; WD40 repe 100.0 2E-27 7E-32 256.6 28.0 202 204-413 13-245 (902)
117 1l0q_A Surface layer protein; 100.0 8.3E-26 2.8E-30 219.9 36.2 238 169-413 33-278 (391)
118 3bws_A Protein LP49; two-domai 100.0 2.5E-26 8.4E-31 226.8 31.4 239 170-413 125-393 (433)
119 3mmy_A MRNA export factor; mRN 100.0 1.5E-26 5E-31 221.9 27.0 216 192-414 24-308 (368)
120 3vu4_A KMHSV2; beta-propeller 100.0 2.2E-26 7.5E-31 222.6 27.8 229 170-411 61-337 (355)
121 3bws_A Protein LP49; two-domai 100.0 3.5E-25 1.2E-29 218.5 36.2 236 169-410 171-432 (433)
122 1l0q_A Surface layer protein; 99.9 2E-25 6.8E-30 217.3 31.5 226 180-413 4-236 (391)
123 3jro_A Fusion protein of prote 99.9 3E-26 1E-30 243.2 26.7 202 206-412 7-240 (753)
124 2j04_A TAU60, YPL007P, hypothe 99.9 7.6E-26 2.6E-30 227.0 26.3 218 167-395 85-348 (588)
125 4gq1_A NUP37; propeller, trans 99.9 4.6E-25 1.6E-29 216.3 24.5 240 170-414 18-352 (393)
126 2w18_A PALB2, fancn, partner a 99.9 1.9E-23 6.5E-28 197.7 24.7 182 177-365 144-355 (356)
127 2hqs_A Protein TOLB; TOLB, PAL 99.9 2E-22 6.7E-27 199.2 32.2 216 187-411 159-388 (415)
128 3vgz_A Uncharacterized protein 99.9 1.5E-21 5.3E-26 186.5 31.5 238 169-413 42-306 (353)
129 2oit_A Nucleoporin 214KDA; NH2 99.9 1.2E-22 4.1E-27 201.9 23.6 237 167-408 36-331 (434)
130 2hqs_A Protein TOLB; TOLB, PAL 99.9 1.3E-22 4.4E-27 200.4 23.2 237 169-412 64-346 (415)
131 2ojh_A Uncharacterized protein 99.9 6E-22 2.1E-26 183.4 23.5 227 168-396 42-290 (297)
132 1ri6_A Putative isomerase YBHE 99.9 2.7E-21 9.4E-26 183.6 27.6 237 169-409 39-307 (343)
133 2ojh_A Uncharacterized protein 99.9 1.7E-21 5.7E-26 180.4 22.6 220 185-412 20-260 (297)
134 3u4y_A Uncharacterized protein 99.9 1.1E-20 3.9E-25 179.3 28.8 229 178-413 10-255 (331)
135 1nir_A Nitrite reductase; hemo 99.9 8.2E-21 2.8E-25 193.9 29.6 239 170-414 181-462 (543)
136 3vgz_A Uncharacterized protein 99.9 6.8E-20 2.3E-24 175.0 33.3 223 170-397 91-333 (353)
137 3u4y_A Uncharacterized protein 99.9 4.6E-20 1.6E-24 175.1 30.7 234 172-411 44-305 (331)
138 1pby_B Quinohemoprotein amine 99.9 2.8E-20 9.6E-25 176.2 29.0 222 181-413 5-313 (337)
139 1jmx_B Amine dehydrogenase; ox 99.9 4.3E-20 1.5E-24 175.9 27.5 230 173-413 5-328 (349)
140 1nir_A Nitrite reductase; hemo 99.9 1.1E-19 3.9E-24 185.5 32.0 228 175-410 145-402 (543)
141 1xfd_A DIP, dipeptidyl aminope 99.9 2.3E-21 7.7E-26 204.0 19.0 234 170-407 19-341 (723)
142 2ecf_A Dipeptidyl peptidase IV 99.9 7.8E-21 2.7E-25 200.6 23.1 235 169-409 38-366 (741)
143 2z3z_A Dipeptidyl aminopeptida 99.9 2.8E-20 9.5E-25 195.4 26.4 240 170-412 123-437 (706)
144 1ri6_A Putative isomerase YBHE 99.9 5.3E-20 1.8E-24 174.7 25.2 220 185-409 13-261 (343)
145 2oit_A Nucleoporin 214KDA; NH2 99.9 7.3E-21 2.5E-25 189.0 19.2 212 186-411 22-279 (434)
146 3hfq_A Uncharacterized protein 99.9 2.7E-19 9.3E-24 171.3 29.0 237 170-409 42-316 (347)
147 2z3z_A Dipeptidyl aminopeptida 99.8 1E-19 3.5E-24 191.1 23.9 236 168-411 82-392 (706)
148 2ecf_A Dipeptidyl peptidase IV 99.8 1.3E-19 4.5E-24 191.2 23.5 232 169-410 110-413 (741)
149 1k32_A Tricorn protease; prote 99.8 2.4E-19 8.2E-24 196.7 24.5 233 170-409 247-501 (1045)
150 1xfd_A DIP, dipeptidyl aminope 99.8 2.7E-19 9.3E-24 188.1 22.8 237 169-410 62-393 (723)
151 3scy_A Hypothetical bacterial 99.8 1.1E-17 3.7E-22 161.1 30.3 235 170-409 52-336 (361)
152 3o4h_A Acylamino-acid-releasin 99.8 1.5E-18 5.2E-23 178.3 19.9 226 169-408 23-274 (582)
153 1z68_A Fibroblast activation p 99.8 1.2E-19 4.3E-24 190.9 12.0 233 172-411 20-347 (719)
154 3hfq_A Uncharacterized protein 99.8 2.6E-17 9E-22 157.4 25.5 219 187-409 16-270 (347)
155 1jof_A Carboxy-CIS,CIS-muconat 99.8 1.4E-17 4.7E-22 161.2 23.5 240 169-410 41-341 (365)
156 3scy_A Hypothetical bacterial 99.8 1.4E-16 4.7E-21 153.3 29.5 220 186-409 26-290 (361)
157 1k32_A Tricorn protease; prote 99.8 3E-17 1E-21 180.1 27.3 234 169-412 339-639 (1045)
158 3fvz_A Peptidyl-glycine alpha- 99.8 4.1E-16 1.4E-20 148.7 30.3 236 169-410 25-322 (329)
159 4a5s_A Dipeptidyl peptidase 4 99.8 3.8E-17 1.3E-21 172.9 24.8 237 171-412 20-355 (740)
160 1pby_B Quinohemoprotein amine 99.8 1.2E-16 4.1E-21 151.0 25.6 198 170-377 36-320 (337)
161 3pe7_A Oligogalacturonate lyas 99.8 3.7E-17 1.3E-21 158.5 22.3 241 168-412 36-331 (388)
162 1q7f_A NHL, brain tumor CG1071 99.8 3.1E-15 1.1E-19 139.0 32.5 233 169-413 31-283 (286)
163 3o4h_A Acylamino-acid-releasin 99.8 4.5E-17 1.5E-21 167.3 21.6 221 169-409 66-314 (582)
164 1z68_A Fibroblast activation p 99.7 2.2E-17 7.4E-22 173.8 15.4 237 169-410 61-391 (719)
165 1jmx_B Amine dehydrogenase; ox 99.7 6.3E-16 2.2E-20 146.9 23.1 197 170-377 45-335 (349)
166 3c5m_A Oligogalacturonate lyas 99.7 4.9E-16 1.7E-20 150.5 20.2 238 169-412 37-331 (396)
167 1jof_A Carboxy-CIS,CIS-muconat 99.7 4.5E-15 1.5E-19 143.4 26.7 219 187-409 14-290 (365)
168 3pe7_A Oligogalacturonate lyas 99.7 9.6E-15 3.3E-19 141.3 25.2 233 172-409 85-381 (388)
169 2oiz_A Aromatic amine dehydrog 99.7 1E-14 3.5E-19 141.0 25.0 233 172-411 54-335 (361)
170 2xdw_A Prolyl endopeptidase; a 99.7 2.2E-14 7.4E-19 151.0 29.3 251 156-412 111-416 (710)
171 1rwi_B Serine/threonine-protei 99.7 4E-14 1.4E-18 130.0 27.0 237 168-413 24-267 (270)
172 3azo_A Aminopeptidase; POP fam 99.7 3.9E-15 1.3E-19 154.9 22.6 231 168-408 24-321 (662)
173 2gop_A Trilobed protease; beta 99.7 1E-14 3.5E-19 139.1 23.2 219 169-409 60-330 (347)
174 3no2_A Uncharacterized protein 99.6 1.5E-13 5E-18 127.9 28.5 210 176-395 3-230 (276)
175 3e5z_A Putative gluconolactona 99.6 2.1E-13 7E-18 127.5 28.2 227 169-410 29-286 (296)
176 2dg1_A DRP35, lactonase; beta 99.6 6.6E-13 2.3E-17 125.9 31.7 219 169-395 46-297 (333)
177 3dsm_A Uncharacterized protein 99.6 1.3E-13 4.6E-18 131.3 26.9 231 170-412 46-303 (328)
178 3azo_A Aminopeptidase; POP fam 99.6 1.8E-14 6.1E-19 150.0 22.4 234 172-412 81-371 (662)
179 3fvz_A Peptidyl-glycine alpha- 99.6 1.2E-13 4.1E-18 131.6 26.3 200 209-413 24-280 (329)
180 2gop_A Trilobed protease; beta 99.6 1.2E-13 4.2E-18 131.6 24.8 216 169-410 16-291 (347)
181 2dg1_A DRP35, lactonase; beta 99.6 1.5E-13 5.1E-18 130.4 24.9 230 170-409 8-262 (333)
182 4a5s_A Dipeptidyl peptidase 4 99.6 2.7E-14 9.4E-19 150.9 21.3 220 172-395 66-380 (740)
183 3c5m_A Oligogalacturonate lyas 99.6 3.8E-14 1.3E-18 137.1 19.4 233 172-412 85-386 (396)
184 2mad_H Methylamine dehydrogena 99.6 7.1E-12 2.4E-16 121.6 33.5 238 172-414 70-354 (373)
185 1pjx_A Dfpase, DIISOPROPYLFLUO 99.6 2.5E-12 8.7E-17 120.5 29.4 233 169-410 19-299 (314)
186 1q7f_A NHL, brain tumor CG1071 99.6 1.9E-12 6.5E-17 120.0 28.2 193 207-409 28-237 (286)
187 2z2n_A Virginiamycin B lyase; 99.6 1.8E-11 6.1E-16 113.4 34.8 230 168-408 15-253 (299)
188 1xip_A Nucleoporin NUP159; bet 99.6 3.8E-14 1.3E-18 137.4 17.0 173 169-352 39-232 (388)
189 2bkl_A Prolyl endopeptidase; m 99.6 3.4E-13 1.2E-17 141.6 23.2 250 155-412 106-399 (695)
190 1yr2_A Prolyl oligopeptidase; 99.5 8.9E-13 3E-17 139.4 24.6 250 155-412 148-443 (741)
191 2xdw_A Prolyl endopeptidase; a 99.5 1.9E-12 6.5E-17 136.1 26.1 221 188-412 99-370 (710)
192 1qks_A Cytochrome CD1 nitrite 99.5 4.3E-11 1.5E-15 122.3 32.6 226 178-410 166-421 (567)
193 1xip_A Nucleoporin NUP159; bet 99.5 6.4E-13 2.2E-17 128.8 17.5 171 209-395 38-231 (388)
194 3g4e_A Regucalcin; six bladed 99.5 6.1E-11 2.1E-15 111.0 30.3 220 169-397 14-261 (297)
195 1qks_A Cytochrome CD1 nitrite 99.5 4.3E-11 1.5E-15 122.2 31.2 240 168-411 197-478 (567)
196 3sjl_D Methylamine dehydrogena 99.5 1.4E-11 4.9E-16 119.0 26.2 239 173-414 83-367 (386)
197 2z2n_A Virginiamycin B lyase; 99.5 4.3E-10 1.5E-14 104.0 34.7 231 168-411 57-296 (299)
198 3dsm_A Uncharacterized protein 99.5 2.9E-11 9.8E-16 115.0 26.6 217 186-412 16-255 (328)
199 2oiz_A Aromatic amine dehydrog 99.5 1E-11 3.5E-16 119.9 23.8 213 169-390 109-360 (361)
200 2qc5_A Streptogramin B lactona 99.5 5.5E-10 1.9E-14 103.3 34.4 231 168-408 20-258 (300)
201 3no2_A Uncharacterized protein 99.5 7.4E-12 2.5E-16 116.3 21.0 184 219-413 4-198 (276)
202 3e5z_A Putative gluconolactona 99.4 2.4E-11 8.2E-16 113.3 24.0 191 207-409 26-245 (296)
203 3hrp_A Uncharacterized protein 99.4 1E-10 3.4E-15 114.9 29.2 231 169-408 132-408 (409)
204 2bkl_A Prolyl endopeptidase; m 99.4 1.6E-11 5.6E-16 128.7 22.6 214 188-409 95-348 (695)
205 2ghs_A AGR_C_1268P; regucalcin 99.4 9E-10 3.1E-14 104.5 31.9 215 169-396 50-290 (326)
206 3c75_H MADH, methylamine dehyd 99.4 3.5E-11 1.2E-15 118.1 22.3 239 172-414 122-406 (426)
207 1rwi_B Serine/threonine-protei 99.4 4.3E-11 1.5E-15 109.6 20.8 197 169-370 68-267 (270)
208 2qc5_A Streptogramin B lactona 99.4 2E-09 6.9E-14 99.5 32.3 228 169-408 63-298 (300)
209 3iuj_A Prolyl endopeptidase; h 99.4 1.6E-10 5.4E-15 121.2 25.6 248 156-412 115-407 (693)
210 3dr2_A Exported gluconolactona 99.3 6.8E-10 2.3E-14 104.2 24.7 223 169-408 46-304 (305)
211 1pjx_A Dfpase, DIISOPROPYLFLUO 99.3 5.9E-10 2E-14 104.2 23.3 196 208-412 17-258 (314)
212 1yr2_A Prolyl oligopeptidase; 99.3 3.9E-10 1.3E-14 119.1 24.2 217 188-409 134-392 (741)
213 3hrp_A Uncharacterized protein 99.2 2.2E-09 7.7E-14 105.3 25.6 196 209-412 131-356 (409)
214 2iwa_A Glutamine cyclotransfer 99.2 6.5E-09 2.2E-13 95.3 25.5 205 198-411 10-238 (266)
215 2hz6_A Endoplasmic reticulum t 99.2 1.4E-11 4.6E-16 119.4 6.6 199 179-390 11-216 (369)
216 3g4e_A Regucalcin; six bladed 99.2 2.8E-09 9.6E-14 99.6 21.4 184 169-353 55-261 (297)
217 2qe8_A Uncharacterized protein 99.2 1.6E-09 5.6E-14 103.4 19.2 223 169-395 18-308 (343)
218 1mda_H Methylamine dehydrogena 99.2 7.2E-10 2.5E-14 106.9 16.5 233 172-414 69-350 (368)
219 3iuj_A Prolyl endopeptidase; h 99.2 1.2E-09 4.1E-14 114.5 19.5 199 207-410 127-359 (693)
220 1npe_A Nidogen, entactin; glyc 99.1 1.4E-07 4.7E-12 86.4 29.7 227 179-413 2-241 (267)
221 2iwa_A Glutamine cyclotransfer 99.1 4.4E-08 1.5E-12 89.7 24.6 194 169-368 22-238 (266)
222 1fwx_A Nitrous oxide reductase 99.1 4.1E-08 1.4E-12 98.9 25.5 228 178-410 101-431 (595)
223 1kb0_A Quinohemoprotein alcoho 99.1 1.1E-08 3.7E-13 106.8 21.9 233 178-414 129-511 (677)
224 2ece_A 462AA long hypothetical 99.0 6.2E-08 2.1E-12 94.5 24.8 215 178-396 95-399 (462)
225 3q7m_A Lipoprotein YFGL, BAMB; 99.0 1.5E-07 5E-12 90.6 27.3 224 178-413 54-299 (376)
226 1yiq_A Quinohemoprotein alcoho 99.0 1.4E-08 4.9E-13 106.2 21.6 234 178-414 122-509 (689)
227 2ghs_A AGR_C_1268P; regucalcin 99.0 6.3E-08 2.1E-12 91.7 24.0 180 169-353 91-291 (326)
228 2hz6_A Endoplasmic reticulum t 99.0 3.2E-11 1.1E-15 116.8 0.9 181 219-413 8-195 (369)
229 3nol_A Glutamine cyclotransfer 99.0 1E-07 3.5E-12 86.5 23.7 188 199-395 33-242 (262)
230 3sjl_D Methylamine dehydrogena 99.0 4.7E-08 1.6E-12 94.4 21.8 212 170-388 139-384 (386)
231 2mad_H Methylamine dehydrogena 99.0 4.5E-07 1.6E-11 87.6 28.1 202 171-381 128-365 (373)
232 1yiq_A Quinohemoprotein alcoho 99.0 1.1E-07 3.8E-12 99.4 24.9 206 186-395 182-535 (689)
233 3mbr_X Glutamine cyclotransfer 99.0 4.5E-07 1.6E-11 81.5 24.9 193 155-352 8-222 (243)
234 2qe8_A Uncharacterized protein 99.0 7.7E-08 2.6E-12 91.7 21.2 197 209-411 17-279 (343)
235 1kb0_A Quinohemoprotein alcoho 98.9 1.9E-07 6.5E-12 97.4 25.3 219 186-409 189-566 (677)
236 3nok_A Glutaminyl cyclase; bet 98.9 2.4E-07 8E-12 84.2 22.3 189 198-397 44-253 (268)
237 3dr2_A Exported gluconolactona 98.9 1.2E-07 4.2E-12 88.6 21.2 188 208-409 44-266 (305)
238 3q7m_A Lipoprotein YFGL, BAMB; 98.9 4.3E-07 1.5E-11 87.3 25.6 223 176-413 102-340 (376)
239 3mbr_X Glutamine cyclotransfer 98.9 8.3E-07 2.8E-11 79.8 24.1 189 198-395 10-221 (243)
240 3nok_A Glutaminyl cyclase; bet 98.9 3.8E-07 1.3E-11 82.8 21.8 180 167-352 54-253 (268)
241 3hxj_A Pyrrolo-quinoline quino 98.9 1.7E-07 5.7E-12 87.9 20.5 216 178-411 108-325 (330)
242 3nol_A Glutamine cyclotransfer 98.9 3.9E-07 1.3E-11 82.7 21.1 193 156-353 31-244 (262)
243 1fwx_A Nitrous oxide reductase 98.9 3.7E-07 1.2E-11 92.1 22.9 185 219-410 100-361 (595)
244 1npe_A Nidogen, entactin; glyc 98.9 8.5E-06 2.9E-10 74.3 30.4 215 169-390 37-263 (267)
245 2ece_A 462AA long hypothetical 98.8 1.7E-06 5.9E-11 84.4 26.5 220 188-409 44-351 (462)
246 1kv9_A Type II quinohemoprotei 98.8 2.4E-07 8.4E-12 96.5 20.9 235 178-414 118-492 (668)
247 1ijq_A LDL receptor, low-densi 98.8 2.6E-05 9E-10 73.3 33.2 224 180-412 3-240 (316)
248 3hxj_A Pyrrolo-quinoline quino 98.8 8.4E-08 2.9E-12 90.0 15.1 222 170-412 62-285 (330)
249 3v64_C Agrin; beta propeller, 98.8 1.8E-05 6.1E-10 75.6 31.3 234 171-412 37-277 (349)
250 3v65_B Low-density lipoprotein 98.8 1.4E-05 4.8E-10 77.4 30.5 233 172-412 81-320 (386)
251 2fp8_A Strictosidine synthase; 98.7 1.3E-05 4.4E-10 75.3 28.2 232 170-411 21-314 (322)
252 3c75_H MADH, methylamine dehyd 98.7 9.8E-07 3.4E-11 86.5 20.1 196 171-374 180-409 (426)
253 3p5b_L Low density lipoprotein 98.7 6.5E-05 2.2E-09 73.1 33.1 228 177-412 82-322 (400)
254 2ad6_A Methanol dehydrogenase 98.7 2.7E-06 9.3E-11 86.9 23.8 230 178-414 116-498 (571)
255 4a2l_A BT_4663, two-component 98.6 9.6E-05 3.3E-09 78.4 33.9 230 168-410 263-526 (795)
256 1kv9_A Type II quinohemoprotei 98.6 4.4E-06 1.5E-10 87.0 22.0 207 186-397 177-521 (668)
257 2p4o_A Hypothetical protein; p 98.6 8.4E-05 2.9E-09 69.2 28.9 219 168-396 32-276 (306)
258 3sov_A LRP-6, low-density lipo 98.6 6.5E-05 2.2E-09 70.7 27.2 227 178-412 4-240 (318)
259 4a2l_A BT_4663, two-component 98.6 0.00016 5.6E-09 76.5 33.3 225 169-410 358-614 (795)
260 2fp8_A Strictosidine synthase; 98.5 1.9E-05 6.5E-10 74.1 23.2 181 209-396 19-247 (322)
261 3qqz_A Putative uncharacterize 98.5 0.00013 4.4E-09 66.2 26.2 195 206-407 24-250 (255)
262 1w6s_A Methanol dehydrogenase 98.5 2.4E-05 8.2E-10 80.1 23.6 229 180-414 124-507 (599)
263 1mda_H Methylamine dehydrogena 98.5 1.2E-06 4.2E-11 84.2 13.2 203 172-387 128-366 (368)
264 2xe4_A Oligopeptidase B; hydro 98.4 1.8E-05 6E-10 83.6 21.8 235 169-411 175-459 (751)
265 2ad6_A Methanol dehydrogenase 98.4 1.8E-05 6E-10 80.8 21.1 207 186-397 175-526 (571)
266 3m0c_C LDL receptor, low-densi 98.4 0.00055 1.9E-08 72.3 32.8 232 172-411 389-633 (791)
267 1flg_A Protein (quinoprotein e 98.4 8.3E-05 2.8E-09 76.0 25.7 234 178-414 118-520 (582)
268 4a0p_A LRP6, LRP-6, low-densit 98.4 0.00099 3.4E-08 68.6 33.0 228 178-412 6-239 (628)
269 2p4o_A Hypothetical protein; p 98.4 0.00022 7.6E-09 66.3 25.7 193 208-409 31-241 (306)
270 1w6s_A Methanol dehydrogenase 98.4 0.00011 3.6E-09 75.4 24.5 193 180-375 65-350 (599)
271 3v9f_A Two-component system se 98.3 0.00057 2E-08 72.2 30.0 229 169-410 314-568 (781)
272 1k3i_A Galactose oxidase precu 98.3 1.2E-05 4.2E-10 83.4 16.8 220 188-411 220-498 (656)
273 4hw6_A Hypothetical protein, I 98.3 0.00025 8.5E-09 69.7 25.2 230 170-409 141-432 (433)
274 3tc9_A Hypothetical hydrolase; 98.3 0.00033 1.1E-08 68.8 25.9 230 170-409 139-429 (430)
275 3qqz_A Putative uncharacterize 98.3 0.0005 1.7E-08 62.3 24.6 196 162-365 23-251 (255)
276 3v64_C Agrin; beta propeller, 98.3 0.00089 3E-08 63.7 27.2 200 170-375 75-283 (349)
277 3amr_A 3-phytase; beta-propell 98.2 0.00033 1.1E-08 66.2 22.8 182 220-409 40-262 (355)
278 3v65_B Low-density lipoprotein 98.2 0.00072 2.5E-08 65.3 26.0 201 169-375 117-326 (386)
279 2xbg_A YCF48-like protein; pho 98.2 0.0017 5.8E-08 61.1 28.0 230 167-408 79-320 (327)
280 3v9f_A Two-component system se 98.2 0.0011 3.8E-08 70.0 29.5 230 168-410 258-524 (781)
281 1flg_A Protein (quinoprotein e 98.2 0.00036 1.2E-08 71.2 24.7 192 179-376 70-364 (582)
282 2xbg_A YCF48-like protein; pho 98.2 0.0042 1.4E-07 58.3 30.5 221 169-403 37-272 (327)
283 2xe4_A Oligopeptidase B; hydro 98.2 8E-05 2.8E-09 78.5 19.5 192 210-408 175-398 (751)
284 1ijq_A LDL receptor, low-densi 98.1 0.0022 7.4E-08 60.0 26.8 184 222-410 3-195 (316)
285 1n7d_A LDL receptor, low-densi 98.1 1E-05 3.6E-10 84.5 11.0 225 179-411 378-615 (699)
286 3sov_A LRP-6, low-density lipo 98.1 0.0028 9.6E-08 59.4 26.7 200 170-375 37-246 (318)
287 3p5b_L Low density lipoprotein 98.0 0.0033 1.1E-07 60.9 26.9 185 222-410 85-277 (400)
288 3s94_A LRP-6, low-density lipo 98.0 0.0035 1.2E-07 64.4 27.9 228 179-412 10-245 (619)
289 2xzh_A Clathrin heavy chain 1; 98.0 0.0088 3E-07 55.6 27.0 230 175-414 33-294 (365)
290 1k3i_A Galactose oxidase precu 98.0 0.00054 1.9E-08 71.0 21.3 219 173-394 248-527 (656)
291 2p9w_A MAL S 1 allergenic prot 98.0 0.0029 9.8E-08 59.2 23.2 196 167-367 12-265 (334)
292 3kya_A Putative phosphatase; s 97.8 0.017 6E-07 57.2 27.1 235 170-411 141-476 (496)
293 3amr_A 3-phytase; beta-propell 97.7 0.011 3.8E-07 55.7 23.5 189 179-375 42-272 (355)
294 4hw6_A Hypothetical protein, I 97.7 0.0069 2.4E-07 59.3 23.1 192 210-408 140-372 (433)
295 3tc9_A Hypothetical hydrolase; 97.7 0.0018 6.3E-08 63.4 18.8 151 252-409 138-300 (430)
296 3m0c_C LDL receptor, low-densi 97.7 0.017 5.7E-07 60.9 26.9 185 222-410 397-589 (791)
297 2xzh_A Clathrin heavy chain 1; 97.7 0.026 8.8E-07 52.5 24.5 194 169-366 108-331 (365)
298 1bpo_A Protein (clathrin); cla 97.6 0.052 1.8E-06 52.5 29.6 229 176-414 33-293 (494)
299 1bpo_A Protein (clathrin); cla 97.6 0.041 1.4E-06 53.2 25.5 192 170-366 108-330 (494)
300 2vpj_A Kelch-like protein 12; 97.6 0.0035 1.2E-07 57.7 17.9 214 187-411 31-279 (301)
301 3s94_A LRP-6, low-density lipo 97.6 0.091 3.1E-06 53.8 30.1 228 178-411 317-552 (619)
302 2ism_A Putative oxidoreductase 97.5 0.067 2.3E-06 50.6 27.2 218 170-395 33-332 (352)
303 3ii7_A Kelch-like protein 7; p 97.5 0.01 3.5E-07 54.6 19.3 220 179-411 13-273 (306)
304 3kya_A Putative phosphatase; s 97.5 0.026 9E-07 55.9 23.0 153 210-365 140-339 (496)
305 4a0p_A LRP6, LRP-6, low-densit 97.5 0.13 4.5E-06 52.7 32.8 228 178-412 308-551 (628)
306 2xn4_A Kelch-like protein 2; s 97.4 0.0077 2.6E-07 55.4 18.0 214 187-411 30-277 (302)
307 1n7d_A LDL receptor, low-densi 97.4 0.00083 2.8E-08 70.1 12.3 201 170-376 408-623 (699)
308 3sre_A PON1, serum paraoxonase 97.3 0.042 1.4E-06 52.1 21.9 163 228-396 81-285 (355)
309 4asc_A Kelch repeat and BTB do 97.3 0.019 6.4E-07 53.2 19.4 182 181-371 8-225 (315)
310 2woz_A Kelch repeat and BTB do 97.3 0.029 1E-06 51.9 20.3 178 186-370 23-234 (318)
311 2p9w_A MAL S 1 allergenic prot 97.3 0.016 5.5E-07 54.2 17.9 157 208-368 12-216 (334)
312 3ei3_A DNA damage-binding prot 97.3 0.083 2.8E-06 58.1 26.1 220 180-410 708-999 (1158)
313 2vpj_A Kelch-like protein 12; 97.2 0.034 1.2E-06 50.9 19.2 185 178-370 63-281 (301)
314 1zgk_A Kelch-like ECH-associat 97.1 0.015 5.1E-07 53.7 16.3 213 187-411 39-288 (308)
315 3pbp_A Nucleoporin NUP82; beta 97.1 0.041 1.4E-06 53.0 19.1 140 177-318 31-208 (452)
316 3ott_A Two-component system se 97.1 0.38 1.3E-05 50.2 28.9 224 169-410 23-260 (758)
317 2xn4_A Kelch-like protein 2; s 97.0 0.031 1.1E-06 51.2 17.4 185 177-370 61-279 (302)
318 2ism_A Putative oxidoreductase 97.0 0.094 3.2E-06 49.6 20.4 140 209-353 31-221 (352)
319 3ii7_A Kelch-like protein 7; p 96.9 0.05 1.7E-06 49.9 17.1 185 178-370 56-275 (306)
320 3a9g_A Putative uncharacterize 96.9 0.24 8.2E-06 46.8 22.1 193 209-410 29-296 (354)
321 3ott_A Two-component system se 96.8 0.63 2.1E-05 48.5 29.9 213 169-395 64-296 (758)
322 1xi4_A Clathrin heavy chain; a 96.8 0.069 2.4E-06 58.9 19.1 233 172-414 29-293 (1630)
323 4asc_A Kelch repeat and BTB do 96.7 0.04 1.4E-06 51.0 15.2 172 189-370 69-280 (315)
324 1zgk_A Kelch-like ECH-associat 96.7 0.04 1.4E-06 50.8 15.1 175 187-370 90-290 (308)
325 3ei3_A DNA damage-binding prot 96.7 1.1 3.6E-05 49.4 29.0 219 169-394 515-753 (1158)
326 2uvk_A YJHT; unknown function, 96.4 0.1 3.5E-06 48.9 16.1 140 177-320 19-224 (357)
327 2be1_A Serine/threonine-protei 96.3 0.058 2E-06 50.7 13.7 199 175-380 7-245 (339)
328 3a9g_A Putative uncharacterize 96.3 0.72 2.5E-05 43.4 26.8 221 169-395 30-329 (354)
329 2woz_A Kelch repeat and BTB do 96.3 0.12 4.2E-06 47.6 15.9 175 189-371 80-291 (318)
330 2zwa_A Leucine carboxyl methyl 96.3 0.1 3.4E-06 54.3 16.6 191 177-371 397-639 (695)
331 3sre_A PON1, serum paraoxonase 96.3 0.4 1.4E-05 45.3 19.3 138 268-409 81-251 (355)
332 3s25_A Hypothetical 7-bladed b 96.3 0.7 2.4E-05 42.5 23.6 208 178-409 25-254 (302)
333 2uvk_A YJHT; unknown function, 96.1 0.22 7.7E-06 46.6 16.7 184 187-374 86-349 (357)
334 1xi4_A Clathrin heavy chain; a 96.1 0.18 6.3E-06 55.7 17.5 180 170-351 108-318 (1630)
335 3pbp_A Nucleoporin NUP82; beta 95.9 0.22 7.6E-06 48.0 15.5 121 153-275 51-208 (452)
336 2be1_A Serine/threonine-protei 95.3 0.042 1.4E-06 51.7 7.8 110 221-331 11-139 (339)
337 2g8s_A Glucose/sorbosone dehyd 95.2 2.1 7.2E-05 40.1 21.4 142 209-353 18-216 (353)
338 3s25_A Hypothetical 7-bladed b 94.9 2.2 7.4E-05 39.2 18.4 125 270-410 88-216 (302)
339 1cru_A Protein (soluble quinop 94.7 3.5 0.00012 40.2 21.0 101 209-310 27-162 (454)
340 2zwa_A Leucine carboxyl methyl 94.5 1 3.4E-05 46.7 16.7 150 218-369 396-579 (695)
341 1tl2_A L10, protein (tachylect 93.6 1 3.5E-05 39.4 12.0 136 209-351 41-198 (236)
342 2g8s_A Glucose/sorbosone dehyd 93.5 4.9 0.00017 37.6 27.6 221 170-395 20-340 (353)
343 1tl2_A L10, protein (tachylect 93.2 3.6 0.00012 36.0 15.0 140 170-316 43-204 (236)
344 3qhy_B Beta-lactamase inhibito 92.9 5.2 0.00018 36.1 17.7 221 170-411 26-247 (282)
345 3das_A Putative oxidoreductase 92.5 3.4 0.00012 38.8 15.0 109 287-395 27-157 (347)
346 3sbq_A Nitrous-oxide reductase 91.8 1.1 3.8E-05 44.6 11.0 120 271-395 299-452 (638)
347 3das_A Putative oxidoreductase 91.5 9 0.00031 35.8 24.3 143 208-353 31-220 (347)
348 1cru_A Protein (soluble quinop 89.3 17 0.00056 35.3 29.6 59 169-227 28-98 (454)
349 3sbq_A Nitrous-oxide reductase 88.7 0.85 2.9E-05 45.5 7.2 73 334-410 323-408 (638)
350 4gq2_M Nucleoporin NUP120; bet 88.5 29 0.001 37.1 20.2 79 252-330 173-274 (950)
351 3kci_A Probable E3 ubiquitin-p 83.7 29 0.001 32.5 28.6 234 170-412 55-347 (389)
352 3b7f_A Glycosyl hydrolase, BNR 83.5 29 0.00099 32.4 21.6 208 179-394 23-295 (394)
353 2wg3_C Hedgehog-interacting pr 82.7 29 0.00098 33.7 14.9 106 292-398 14-158 (463)
354 3qhy_B Beta-lactamase inhibito 81.8 15 0.00051 33.0 11.7 161 170-344 104-264 (282)
355 3uc1_A DNA gyrase subunit A; D 81.8 32 0.0011 31.7 19.2 220 166-388 41-309 (327)
356 2rqw_B 24-meric peptide from s 81.3 0.73 2.5E-05 24.8 1.5 12 45-56 4-15 (26)
357 4fhn_B Nucleoporin NUP120; pro 79.6 15 0.0005 40.3 12.7 37 294-330 240-276 (1139)
358 2wg3_C Hedgehog-interacting pr 77.3 54 0.0019 31.7 15.0 103 209-311 14-158 (463)
359 4gq2_M Nucleoporin NUP120; bet 73.8 99 0.0034 33.0 22.8 38 335-375 237-274 (950)
360 1zi0_A DNA gyrase subunit A; b 72.8 55 0.0019 29.6 19.8 155 166-321 41-225 (307)
361 1suu_A DNA gyrase subunit A; t 71.1 61 0.0021 29.4 21.2 155 166-321 46-230 (312)
362 3no0_A DNA gyrase subunit A; D 69.6 61 0.0021 28.8 20.6 194 165-366 22-245 (276)
363 3f7f_A Nucleoporin NUP120; nuc 69.4 1E+02 0.0034 31.7 14.8 78 251-330 162-258 (729)
364 1a12_A RCC1, regulator of chro 69.1 77 0.0026 29.8 25.7 226 169-411 60-366 (413)
365 3l6v_A GYRA, DNA gyrase subuni 68.3 79 0.0027 29.6 21.8 113 166-278 45-179 (370)
366 1suu_A DNA gyrase subunit A; t 65.5 80 0.0027 28.6 21.0 186 218-410 6-231 (312)
367 3no0_A DNA gyrase subunit A; D 63.3 82 0.0028 28.0 18.9 195 208-410 23-246 (276)
368 3f7f_A Nucleoporin NUP120; nuc 63.1 16 0.00056 37.5 7.6 70 335-409 223-304 (729)
369 4a9v_A PHOX; hydrolase, beta-p 62.9 28 0.00095 34.9 9.0 58 170-227 478-549 (592)
370 3q6k_A 43.2 kDa salivary prote 62.8 1E+02 0.0035 29.0 23.0 183 187-395 123-341 (381)
371 3zwu_A Alkaline phosphatase PH 58.1 26 0.0009 35.2 8.0 55 171-226 479-548 (592)
372 3zwu_A Alkaline phosphatase PH 56.3 37 0.0013 34.1 8.7 59 294-352 478-549 (592)
373 1zvt_A Topoisomerase IV subuni 55.3 78 0.0027 27.8 10.0 114 165-278 31-162 (256)
374 4fhn_B Nucleoporin NUP120; pro 51.6 58 0.002 35.5 10.1 38 210-247 239-276 (1139)
375 4a9v_A PHOX; hydrolase, beta-p 51.0 66 0.0023 32.2 9.4 61 293-353 477-550 (592)
376 3q6k_A 43.2 kDa salivary prote 47.1 1.9E+02 0.0063 27.2 20.5 151 231-410 124-306 (381)
377 3of7_A Regulator of chromosome 46.0 2.1E+02 0.0071 27.4 25.5 188 168-366 67-340 (473)
378 4hvt_A Ritya.17583.B, post-pro 45.0 2.7E+02 0.0092 28.5 23.2 247 155-409 112-429 (711)
379 3mvd_K Regulator of chromosome 42.5 2.2E+02 0.0074 26.6 31.8 230 170-411 77-375 (423)
380 1zi0_A DNA gyrase subunit A; b 41.1 2E+02 0.0068 25.8 19.2 183 219-408 2-224 (307)
381 4d9s_A UVB-resistance protein 37.5 2.6E+02 0.0088 26.0 29.1 229 170-411 18-306 (406)
382 1wp5_A Topoisomerase IV; broke 34.0 2.7E+02 0.0091 25.2 23.5 156 165-321 37-224 (323)
383 3kci_A Probable E3 ubiquitin-p 33.3 2.9E+02 0.0099 25.4 20.4 152 169-322 160-345 (389)
384 1zvu_A Topoisomerase IV subuni 30.1 3.4E+02 0.012 27.7 10.9 115 165-279 501-633 (716)
385 3b7f_A Glycosyl hydrolase, BNR 25.4 3.9E+02 0.013 24.4 20.3 166 221-394 23-249 (394)
386 4d9s_A UVB-resistance protein 24.2 4.3E+02 0.015 24.4 30.1 230 169-411 69-358 (406)
No 1
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=1.2e-51 Score=408.95 Aligned_cols=349 Identities=42% Similarity=0.744 Sum_probs=253.5
Q ss_pred CCCCCCCc--ccccccCCCCCCCCccCCCCCCChHHHHHHHHHHhCCCCCCCccCCCCCCCCCcceeecCCCcCCCCCCC
Q 014934 51 PSRSSSNF--DLFNISQPSPNSPAVTDSHKDDNSGTYTALLRAALFGPETPEKKDVLGPPSGRNIFRFKSETRRSLHSLS 128 (415)
Q Consensus 51 p~r~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 128 (415)
|+|++|++ +.|.+..... +. +...+....|+.++.+.+.+... ...|||.|+..++.++....
T Consensus 2 p~r~~~~~~~a~~~~~~~~~--~~---~~~~~~~~~~~~~~~~~~~~~~~----------~~~~il~~~~~~~~~~~~~~ 66 (420)
T 4gga_A 2 PHRSAAQMEVASFLLSKENQ--PE---NSQTPTKKEHQKAWALNLNGFDV----------EEAKILRLSGKPQNAPEGYQ 66 (420)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCcccCchhhhhccccccCC--cc---cccCcchHHHHHHHHhhcccccc----------ccceEEeccCCCCCCCcccc
Confidence 89999998 4677653221 10 12234567888888887765322 24689999876544332211
Q ss_pred CcccCCCCCCCcCCCCCCCCCCCCCCCceeccCCCCCCCcceeEeecCCCcEEEEEcCCeEEEEECCCCCeEEeEec-CC
Q 014934 129 PFGFDDDVASGVSHSPVKAPRKVPRSPYKILDAPALQDDFYLNLVDWSSHNVLAVGLGNCVYLWNACSSKVTKLCDL-GI 207 (415)
Q Consensus 129 ~~~~~~~~~~~~~~~~~k~~r~i~~~p~~~ld~~~l~~~~~i~~l~ws~~~~la~~~d~~V~iwd~~~~~~~~~~~~-~~ 207 (415)
..............++++..|+|+..|+++||||.+.+|||+++|+||++++||+|.|++|+|||..++++..++.+ +|
T Consensus 67 ~~~~~~~~~~~~~~~~~~~~r~i~~~p~~~l~ap~~~~d~y~~~l~wS~~n~lAvgld~tV~lWd~~tg~~~~~~~~~~~ 146 (420)
T 4gga_A 67 NRLKVLYSQKATPGSSRKTCRYIPSLPDRILDAPEIRNDYYLNLVDWSSGNVLAVALDNSVYLWSASSGDILQLLQMEQP 146 (420)
T ss_dssp -------------------CCCCCSSCSEEEECTTCCCCTTCBCEEECTTSEEEEEETTEEEEEETTTCCEEEEEECCST
T ss_pred cCcceecccccCCCCccCCCcccCCCCceEEECCCCcccccceeEEECCCCEEEEEeCCEEEEEECCCCCEEEEEEecCC
Confidence 00000000011234677889999999999999999999999999999999999999999999999999999888876 56
Q ss_pred CCCeEEEEEcCCCCeEEEEECCCcEEEEECCCCeeeEEecCCCccEEEEEeeCCEEEEEeCCCcEEEEECCCCCccEEEe
Q 014934 208 DDSVCSVGWANRNTHLAVGTSHGKVQIWDASRCKRVRTMEGHRLRVGALAWSSSLLSSGSRDKSILQRDIRAQEDFVSKL 287 (415)
Q Consensus 208 ~~~V~~v~~sp~g~~la~g~~dg~V~iwd~~~~~~~~~l~~h~~~V~~l~~~~~~l~sgs~dg~I~iwd~~~~~~~~~~~ 287 (415)
...|++|+|+|+|++||+|+.||.|+|||+.+++.+..+.+|...+.+++|++.+|++|+.|+.+++||.+.....+..+
T Consensus 147 ~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~~~~~~h~~~v~~~s~~~~~l~sgs~d~~i~~~d~~~~~~~~~~~ 226 (420)
T 4gga_A 147 GEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSWNSYILSSGSRSGHIHHHDVRVAEHHVATL 226 (420)
T ss_dssp TCCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTEEEEEETTSEEEEEETTSSSCEEEEE
T ss_pred CCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCcEEEEEeCCCCceEEEeeCCCEEEEEeCCCceeEeeecccceeeEEe
Confidence 78899999999999999999999999999999999999999999999999999999999999999999999888778889
Q ss_pred ccccCCeEEEEEeCCCCEEEEEeCCCcEEEEECCCCc----eeEEeccCCCcEEEEEEcCCCCcEEEEEcCCCCCeEEEE
Q 014934 288 SGHKSEVCGLKWSYDNRELASGGNDNRLFVWNQHSTQ----PVLKYCEHTAAVKAIAWSPHLHGLLASGGGTADRCIRFW 363 (415)
Q Consensus 288 ~~h~~~V~~l~~spdg~~lasg~~dg~I~iwd~~~~~----~~~~~~~h~~~V~~l~~sp~~~~llasggg~~d~~I~iw 363 (415)
.+|...++.+.|+|++++|++++.|+.|+|||..+++ .+.....|.+.|.+++|+|++..++++++|+.|++|++|
T Consensus 227 ~~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iw 306 (420)
T 4gga_A 227 SGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIW 306 (420)
T ss_dssp ECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEE
T ss_pred cccccceeeeeecCCCCeeeeeeccccceEEeeccccccceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEE
Confidence 9999999999999999999999999999999998764 456777899999999999999999999888899999999
Q ss_pred ECCCCcEEEEeeCCCCEEEEEECCCCCeEEEEEecCCCcEEEEECCCCccc
Q 014934 364 NTTTNTHLSCMDTGSQVCNLVWSKNVNELVSTHGYSQNQIIVWRYPTMSKV 414 (415)
Q Consensus 364 d~~t~~~~~~~~~~~~V~~l~~s~~~~~l~s~~g~~dg~I~vw~~~s~~~l 414 (415)
|+.+++++..+.++..++++.|+++++++++++|+.|+.|+|||+++++++
T Consensus 307 d~~t~~~~~~~~~~~~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~~~v 357 (420)
T 4gga_A 307 NVCSGACLSAVDAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKV 357 (420)
T ss_dssp ETTTTEEEEEEECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEE
T ss_pred eCCccccceeeccccceeeeeecCCCCeEEEEEecCCCEEEEEECCCCcEE
Confidence 999999999999999999999999999999988889999999999998764
No 2
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=5.1e-49 Score=387.49 Aligned_cols=337 Identities=39% Similarity=0.702 Sum_probs=263.0
Q ss_pred CcccCCCCCCCcccccccCCCCCCCCccCCCCCCChHHHHHHHHHHhCCCCCCCccCCCCCCCCCcceeecCCCcCCCCC
Q 014934 47 DRFIPSRSSSNFDLFNISQPSPNSPAVTDSHKDDNSGTYTALLRAALFGPETPEKKDVLGPPSGRNIFRFKSETRRSLHS 126 (415)
Q Consensus 47 drfip~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 126 (415)
|||||+|+.+|.+.|++.... ....|+..|.+.+.... +.|+|.|...++.....
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~------------~~r~l~~~~~~~~~~~~ 55 (401)
T 4aez_A 1 DRFIPSRPNTANAFVNSISSD-------------VPFDYSESVAEACGFDL------------NTRVLAFKLDAPEAKKP 55 (401)
T ss_dssp --------------------------------------------------C------------CEEEEEECSCCCCCCCC
T ss_pred CCcCCCchhhhHHHHhhcCCc-------------chHHHHHHHHHHcCCCc------------cCcEEeeCCCCCCCcCc
Confidence 899999997677788874221 23479999998886421 46999998866543322
Q ss_pred CCCcccCCCCCCCcCCCCCCCCCCCCCCCceeccCCCCCCCcceeEeecCCCcEEEEEcCCeEEEEECCCCCeEEeEecC
Q 014934 127 LSPFGFDDDVASGVSHSPVKAPRKVPRSPYKILDAPALQDDFYLNLVDWSSHNVLAVGLGNCVYLWNACSSKVTKLCDLG 206 (415)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~~k~~r~i~~~p~~~ld~~~l~~~~~i~~l~ws~~~~la~~~d~~V~iwd~~~~~~~~~~~~~ 206 (415)
.. ....... .......+..|.++..|.++++++...+++++++++|+++.+++++.++.|++|+..+++........
T Consensus 56 ~~-~~~~~~~--~~~~~~~~~~r~~~~~p~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~d~~v~lw~~~~~~~~~~~~~~ 132 (401)
T 4aez_A 56 VD-LRTQHNR--PQRPVVTPAKRRFNTTPERVLDAPGIIDDYYLNLLDWSNLNVVAVALERNVYVWNADSGSVSALAETD 132 (401)
T ss_dssp CC--------------------CCCCCSCSEEEECTTCCCCTTCBCEEECTTSEEEEEETTEEEEEETTTCCEEEEEECC
T ss_pred cc-chhhccc--ccCCccccccCcCCCCcceeeeCCCCcCCceEEEEeecCCCEEEEECCCeEEEeeCCCCcEeEeeecC
Confidence 21 1101100 01112234678999999999999999999999999999999999999999999999999998888877
Q ss_pred CCCCeEEEEEcCCCCeEEEEECCCcEEEEECCCCeeeEEecCCCccEEEEEeeCCEEEEEeCCCcEEEEECCCCCccEEE
Q 014934 207 IDDSVCSVGWANRNTHLAVGTSHGKVQIWDASRCKRVRTMEGHRLRVGALAWSSSLLSSGSRDKSILQRDIRAQEDFVSK 286 (415)
Q Consensus 207 ~~~~V~~v~~sp~g~~la~g~~dg~V~iwd~~~~~~~~~l~~h~~~V~~l~~~~~~l~sgs~dg~I~iwd~~~~~~~~~~ 286 (415)
|...|++++|+|+|++|++|+.||.|++||+.+++.+..+.+|...|.+++|++++|++|+.||.|++||++........
T Consensus 133 ~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~ 212 (401)
T 4aez_A 133 ESTYVASVKWSHDGSFLSVGLGNGLVDIYDVESQTKLRTMAGHQARVGCLSWNRHVLSSGSRSGAIHHHDVRIANHQIGT 212 (401)
T ss_dssp TTCCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEEETTEEEEEETTSEEEEEETTSSSCEEEE
T ss_pred CCCCEEEEEECCCCCEEEEECCCCeEEEEECcCCeEEEEecCCCCceEEEEECCCEEEEEcCCCCEEEEecccCcceeeE
Confidence 88999999999999999999999999999999999999999999999999999999999999999999999976667888
Q ss_pred eccccCCeEEEEEeCCCCEEEEEeCCCcEEEEECCCCceeEEeccCCCcEEEEEEcCCCCcEEEEEcCCCCCeEEEEECC
Q 014934 287 LSGHKSEVCGLKWSYDNRELASGGNDNRLFVWNQHSTQPVLKYCEHTAAVKAIAWSPHLHGLLASGGGTADRCIRFWNTT 366 (415)
Q Consensus 287 ~~~h~~~V~~l~~spdg~~lasg~~dg~I~iwd~~~~~~~~~~~~h~~~V~~l~~sp~~~~llasggg~~d~~I~iwd~~ 366 (415)
+.+|...|++++|+|++++|++|+.|+.|++||+++++++..+..|...|.+++|+|++..++++++|+.|+.|++||+.
T Consensus 213 ~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~ 292 (401)
T 4aez_A 213 LQGHSSEVCGLAWRSDGLQLASGGNDNVVQIWDARSSIPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAA 292 (401)
T ss_dssp EECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCSSEEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETT
T ss_pred EcCCCCCeeEEEEcCCCCEEEEEeCCCeEEEccCCCCCccEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECC
Confidence 89999999999999999999999999999999999999999999999999999999999999999877789999999999
Q ss_pred CCcEEEEeeCCCCEEEEEECCCCCeEEEEEecCCCcEEEEECCCC
Q 014934 367 TNTHLSCMDTGSQVCNLVWSKNVNELVSTHGYSQNQIIVWRYPTM 411 (415)
Q Consensus 367 t~~~~~~~~~~~~V~~l~~s~~~~~l~s~~g~~dg~I~vw~~~s~ 411 (415)
+++.+..+.++..|.+++|+|++++|++++|+.||.|++|++++.
T Consensus 293 ~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~~ 337 (401)
T 4aez_A 293 TGARVNTVDAGSQVTSLIWSPHSKEIMSTHGFPDNNLSIWSYSSS 337 (401)
T ss_dssp TCCEEEEEECSSCEEEEEECSSSSEEEEEECTTTCEEEEEEEETT
T ss_pred CCCEEEEEeCCCcEEEEEECCCCCeEEEEeecCCCcEEEEecCCc
Confidence 999999999999999999999999999987889999999999874
No 3
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=100.00 E-value=1.5e-41 Score=321.01 Aligned_cols=270 Identities=50% Similarity=0.923 Sum_probs=248.4
Q ss_pred CCCCCCCCCCCceeccCCCCCCCcceeEeecCCCcEEEEEcCCeEEEEECCCCCeEEeEec-CCCCCeEEEEEcCCCCeE
Q 014934 145 VKAPRKVPRSPYKILDAPALQDDFYLNLVDWSSHNVLAVGLGNCVYLWNACSSKVTKLCDL-GIDDSVCSVGWANRNTHL 223 (415)
Q Consensus 145 ~k~~r~i~~~p~~~ld~~~l~~~~~i~~l~ws~~~~la~~~d~~V~iwd~~~~~~~~~~~~-~~~~~V~~v~~sp~g~~l 223 (415)
+|..|.||..|+++||||++.+|||+++|+||++++||+|.|++|+|||+.++++.+.+.. +|...|++++|+|+|++|
T Consensus 3 ~~~~r~~p~~p~rvldap~~~~d~y~~~l~WS~~~~lAvg~D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l 82 (318)
T 4ggc_A 3 RKTCRYIPSLPDRILDAPEIRNDYYLNLVDWSSGNVLAVALDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYL 82 (318)
T ss_dssp ---CCCCCSSCSEEEECTTCCCCTTCBCEEECTTSEEEEEETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEE
T ss_pred CCCCcccCCCCCEEeeCCCCcccccceEEEECCCCEEEEEeCCEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEE
Confidence 4667999999999999999999999999999999999999999999999999999888765 677889999999999999
Q ss_pred EEEECCCcEEEEECCCCeeeEEecCCCccEEEEEeeCCEEEEEeCCCcEEEEECCCCCccEEEeccccCCeEEEEEeCCC
Q 014934 224 AVGTSHGKVQIWDASRCKRVRTMEGHRLRVGALAWSSSLLSSGSRDKSILQRDIRAQEDFVSKLSGHKSEVCGLKWSYDN 303 (415)
Q Consensus 224 a~g~~dg~V~iwd~~~~~~~~~l~~h~~~V~~l~~~~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~spdg 303 (415)
|+|+.||.|++||+.+++.+..+.+|...+.++.+.+..+++|+.++.+++|+.......+..+.+|...+..+.+++++
T Consensus 83 ~sgs~Dg~v~iw~~~~~~~~~~~~~h~~~~~~~~~~~~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (318)
T 4ggc_A 83 AVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSWNSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDG 162 (318)
T ss_dssp EEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTS
T ss_pred EEEECCCcEEEeecCCceeEEEecCccceEEEeecCCCEEEEEecCCceEeeecCCCceeEEEEcCccCceEEEEEcCCC
Confidence 99999999999999999999999999999999999999999999999999999998877788889999999999999999
Q ss_pred CEEEEEeCCCcEEEEECCCCc----eeEEeccCCCcEEEEEEcCCCCcEEEEEcCCCCCeEEEEECCCCcEEEEeeCCCC
Q 014934 304 RELASGGNDNRLFVWNQHSTQ----PVLKYCEHTAAVKAIAWSPHLHGLLASGGGTADRCIRFWNTTTNTHLSCMDTGSQ 379 (415)
Q Consensus 304 ~~lasg~~dg~I~iwd~~~~~----~~~~~~~h~~~V~~l~~sp~~~~llasggg~~d~~I~iwd~~t~~~~~~~~~~~~ 379 (415)
++|++++.|+.|+|||+++++ .......|.+.|.+++++|++..++..++|..++.|++||...+.......+...
T Consensus 163 ~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~~~~~~~~~ 242 (318)
T 4ggc_A 163 RHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAHSQ 242 (318)
T ss_dssp SEEEEEETTSCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCEEEEEECSSC
T ss_pred CEEEEEecCcceeEEECCCCcccccceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEecccccccccccceee
Confidence 999999999999999998764 3455667889999999999998888776667899999999999999988889999
Q ss_pred EEEEEECCCCCeEEEEEecCCCcEEEEECCCCccc
Q 014934 380 VCNLVWSKNVNELVSTHGYSQNQIIVWRYPTMSKV 414 (415)
Q Consensus 380 V~~l~~s~~~~~l~s~~g~~dg~I~vw~~~s~~~l 414 (415)
+..+.|++++..+++++|+.|+.|+|||+++++.+
T Consensus 243 v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~~~~ 277 (318)
T 4ggc_A 243 VCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKV 277 (318)
T ss_dssp EEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEE
T ss_pred eeeeeecccccceEEEEEcCCCEEEEEECCCCcEE
Confidence 99999999999999877888999999999987754
No 4
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=1.4e-39 Score=314.53 Aligned_cols=241 Identities=21% Similarity=0.283 Sum_probs=208.2
Q ss_pred CcceeEeecCCC-cEEEEEcCCeEEEEECCCCCeEEeEe---cCCCCCeEEEEEcCCCCeEEEEECCCcEEEEECCCCee
Q 014934 167 DFYLNLVDWSSH-NVLAVGLGNCVYLWNACSSKVTKLCD---LGIDDSVCSVGWANRNTHLAVGTSHGKVQIWDASRCKR 242 (415)
Q Consensus 167 ~~~i~~l~ws~~-~~la~~~d~~V~iwd~~~~~~~~~~~---~~~~~~V~~v~~sp~g~~la~g~~dg~V~iwd~~~~~~ 242 (415)
+..|++++|+++ .+++++.|+.|+|||+.+++...... .+|.+.|++|+|+|+|++|++|+.||+|++||+.+++.
T Consensus 82 ~~~v~~~~~s~d~~l~~~s~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~~~ 161 (344)
T 4gqb_B 82 EAGVADLTWVGERGILVASDSGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQVV 161 (344)
T ss_dssp SSCEEEEEEETTTEEEEEETTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEE
T ss_pred CCCEEEEEEeCCCeEEEEECCCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcE
Confidence 345899999994 45555578999999999987544332 38999999999999999999999999999999999999
Q ss_pred eEEecCCCccEEEEEeeC---CEEEEEeCCCcEEEEECCCCCccEEEe--ccccCCeEEEEEeC-CCCEEEEEeCCCcEE
Q 014934 243 VRTMEGHRLRVGALAWSS---SLLSSGSRDKSILQRDIRAQEDFVSKL--SGHKSEVCGLKWSY-DNRELASGGNDNRLF 316 (415)
Q Consensus 243 ~~~l~~h~~~V~~l~~~~---~~l~sgs~dg~I~iwd~~~~~~~~~~~--~~h~~~V~~l~~sp-dg~~lasg~~dg~I~ 316 (415)
+..+.+|...|.+++|++ .+|++|+.|++|++||+++++ ....+ ..|...+.+++|+| ++++||+|+.||.|+
T Consensus 162 ~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~-~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~ 240 (344)
T 4gqb_B 162 LSSYRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPK-PASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVS 240 (344)
T ss_dssp EEEECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSS-CEEECC----CCCEEEEEECSSCTTEEEEEETTSEEE
T ss_pred EEEEcCcCCceEEEEecCCCCCceeeeccccccccccccccc-eeeeeecceeeccceeeeecCCCCcceEEeccCCcEE
Confidence 999999999999999983 589999999999999999887 34444 34566799999998 567899999999999
Q ss_pred EEECCCCceeEEeccCCCcEEEEEEcCCCCcEEEEEcCCCCCeEEEEECCCCcEEEEeeCCCCEEEEEECCCCCeEEEEE
Q 014934 317 VWNQHSTQPVLKYCEHTAAVKAIAWSPHLHGLLASGGGTADRCIRFWNTTTNTHLSCMDTGSQVCNLVWSKNVNELVSTH 396 (415)
Q Consensus 317 iwd~~~~~~~~~~~~h~~~V~~l~~sp~~~~llasggg~~d~~I~iwd~~t~~~~~~~~~~~~V~~l~~s~~~~~l~s~~ 396 (415)
|||+++++++..+.+|...|.+++|+|++..+|++++ .|+.|++||+.+++++....|...|.+++|+|++..|+++
T Consensus 241 ~wd~~~~~~~~~~~~h~~~v~~v~fsp~g~~~lasgs--~D~~i~vwd~~~~~~~~~~~H~~~V~~v~~sp~~~~llas- 317 (344)
T 4gqb_B 241 LVDTKSTSCVLSSAVHSQCVTGLVFSPHSVPFLASLS--EDCSLAVLDSSLSELFRSQAHRDFVRDATWSPLNHSLLTT- 317 (344)
T ss_dssp EEESCC--CCEEEECCSSCEEEEEECSSSSCCEEEEE--TTSCEEEECTTCCEEEEECCCSSCEEEEEECSSSTTEEEE-
T ss_pred EEECCCCcEEEEEcCCCCCEEEEEEccCCCeEEEEEe--CCCeEEEEECCCCcEEEEcCCCCCEEEEEEeCCCCeEEEE-
Confidence 9999999999999999999999999999977899987 8999999999999988777788999999999999876654
Q ss_pred ecCCCcEEEEECCCC
Q 014934 397 GYSQNQIIVWRYPTM 411 (415)
Q Consensus 397 g~~dg~I~vw~~~s~ 411 (415)
++.|++|++|++++.
T Consensus 318 ~s~D~~v~~w~v~~~ 332 (344)
T 4gqb_B 318 VGWDHQVVHHVVPTE 332 (344)
T ss_dssp EETTSCEEEEECCC-
T ss_pred EcCCCeEEEEECCCC
Confidence 668999999999864
No 5
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=4.8e-37 Score=290.92 Aligned_cols=240 Identities=17% Similarity=0.293 Sum_probs=214.5
Q ss_pred ceeEeecCC-CcEEEEE-cCCeEEEEECCCCCeEEeEecCCCCCeEEEEEcCCCCeEEEEECCCcEEEEECCCCeeeEEe
Q 014934 169 YLNLVDWSS-HNVLAVG-LGNCVYLWNACSSKVTKLCDLGIDDSVCSVGWANRNTHLAVGTSHGKVQIWDASRCKRVRTM 246 (415)
Q Consensus 169 ~i~~l~ws~-~~~la~~-~d~~V~iwd~~~~~~~~~~~~~~~~~V~~v~~sp~g~~la~g~~dg~V~iwd~~~~~~~~~l 246 (415)
.|++++|+| +.+|+++ .|+.|++||+.+++....+. .|...|.+++|+|++++|++|+.||.|++||+.+++.+..+
T Consensus 15 ~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~ 93 (304)
T 2ynn_A 15 RVKGIDFHPTEPWVLTTLYSGRVELWNYETQVEVRSIQ-VTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDF 93 (304)
T ss_dssp CEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEE-CCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEE
T ss_pred ceEEEEECCCCCEEEEEcCCCcEEEEECCCCceeEEee-ccCCcEEEEEEeCCCCEEEEECCCCEEEEEECCCCcEEEEE
Confidence 589999999 6666666 68999999999998877776 78889999999999999999999999999999999999999
Q ss_pred cCCCccEEEEEee--CCEEEEEeCCCcEEEEECCCCCccEEEeccccCCeEEEEEeC-CCCEEEEEeCCCcEEEEECCCC
Q 014934 247 EGHRLRVGALAWS--SSLLSSGSRDKSILQRDIRAQEDFVSKLSGHKSEVCGLKWSY-DNRELASGGNDNRLFVWNQHST 323 (415)
Q Consensus 247 ~~h~~~V~~l~~~--~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~sp-dg~~lasg~~dg~I~iwd~~~~ 323 (415)
.+|...|.+++|+ +.+|++|+.|++|++||++........+.+|...|.+++|+| ++.+||+|+.|+.|++||+++.
T Consensus 94 ~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~D~~v~iwd~~~~ 173 (304)
T 2ynn_A 94 EAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQS 173 (304)
T ss_dssp ECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEEECCCCSCEEEEEECTTCTTEEEEEETTSEEEEEETTCS
T ss_pred eCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhhhhcccCCcEEEEEECCCCCCEEEEEeCCCeEEEEECCCC
Confidence 9999999999998 479999999999999999987656778899999999999999 6789999999999999999988
Q ss_pred ceeEEec-cCCCcEEEEEEcCCC-CcEEEEEcCCCCCeEEEEECCCCcEEEEee-CCCCEEEEEECCCCCeEEEEEecCC
Q 014934 324 QPVLKYC-EHTAAVKAIAWSPHL-HGLLASGGGTADRCIRFWNTTTNTHLSCMD-TGSQVCNLVWSKNVNELVSTHGYSQ 400 (415)
Q Consensus 324 ~~~~~~~-~h~~~V~~l~~sp~~-~~llasggg~~d~~I~iwd~~t~~~~~~~~-~~~~V~~l~~s~~~~~l~s~~g~~d 400 (415)
.+...+. +|...|..++|+|.. ..+|++++ .|+.|++||+++++++..+. |...|..++|+|++..|++ |+.|
T Consensus 174 ~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s--~D~~i~iWd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s--~s~D 249 (304)
T 2ynn_A 174 TPNFTLTTGQERGVNYVDYYPLPDKPYMITAS--DDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLPIIIS--GSED 249 (304)
T ss_dssp SCSEEEECCCTTCEEEEEECCSTTCCEEEEEE--TTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSEEEE--EETT
T ss_pred CccceeccCCcCcEEEEEEEEcCCCCEEEEEc--CCCeEEEEeCCCCccceeeCCCCCCEEEEEECCCCCEEEE--EcCC
Confidence 7766664 566889999998842 23778877 89999999999999998887 6788999999999999998 7899
Q ss_pred CcEEEEECCCCcc
Q 014934 401 NQIIVWRYPTMSK 413 (415)
Q Consensus 401 g~I~vw~~~s~~~ 413 (415)
|.|++||..+.+.
T Consensus 250 g~i~iWd~~~~~~ 262 (304)
T 2ynn_A 250 GTLKIWNSSTYKV 262 (304)
T ss_dssp SCEEEEETTTCCE
T ss_pred CeEEEEECCCCce
Confidence 9999999987653
No 6
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=4.2e-38 Score=305.37 Aligned_cols=242 Identities=17% Similarity=0.266 Sum_probs=206.8
Q ss_pred CcceeEeecCC-CcEEEEEcCCeEEEEECCCCCeEEe---EecCCCCCeEEEEEcCCCCeEEEEECCCcEEEEECCCCee
Q 014934 167 DFYLNLVDWSS-HNVLAVGLGNCVYLWNACSSKVTKL---CDLGIDDSVCSVGWANRNTHLAVGTSHGKVQIWDASRCKR 242 (415)
Q Consensus 167 ~~~i~~l~ws~-~~~la~~~d~~V~iwd~~~~~~~~~---~~~~~~~~V~~v~~sp~g~~la~g~~dg~V~iwd~~~~~~ 242 (415)
.-.|.+++|+| +.+|+++.++.|+|||+.+++.... ...+|.+.|++++|+|+|++|++|+.||.|++||+.+++.
T Consensus 94 ~~~V~~~~~s~d~~~l~~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~~~~~ 173 (357)
T 4g56_B 94 EAGVTDVAWVSEKGILVASDSGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQKAV 173 (357)
T ss_dssp SSCEEEEEEETTTEEEEEETTSCEEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTTEE
T ss_pred CCCEEEEEEcCCCCEEEEECCCEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcE
Confidence 34589999999 7778777899999999988765432 2237899999999999999999999999999999999999
Q ss_pred eEEecCCCccEEEEEeeC---CEEEEEeCCCcEEEEECCCCCccE-EEeccccCCeEEEEEeCC-CCEEEEEeCCCcEEE
Q 014934 243 VRTMEGHRLRVGALAWSS---SLLSSGSRDKSILQRDIRAQEDFV-SKLSGHKSEVCGLKWSYD-NRELASGGNDNRLFV 317 (415)
Q Consensus 243 ~~~l~~h~~~V~~l~~~~---~~l~sgs~dg~I~iwd~~~~~~~~-~~~~~h~~~V~~l~~spd-g~~lasg~~dg~I~i 317 (415)
+..+.+|...|.+++|++ .++++++.||.|++||++++.... .....|...+.+++|+|+ +.+||+|+.|+.|++
T Consensus 174 ~~~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~ 253 (357)
T 4g56_B 174 LKSYNAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFACGDETGNVSL 253 (357)
T ss_dssp EEEECCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEESSSCEEE
T ss_pred EEEEcCCCCCEEEEEEccCCCceeeeeccCCceEEEECCCCceeeeeeeccccccccchhhhhcccceEEEeecccceeE
Confidence 999999999999999983 589999999999999999876322 223467788999999997 568999999999999
Q ss_pred EECCCCceeEEeccCCCcEEEEEEcCCCCcEEEEEcCCCCCeEEEEECCCCcEEEEeeCCCCEEEEEECC-CCCeEEEEE
Q 014934 318 WNQHSTQPVLKYCEHTAAVKAIAWSPHLHGLLASGGGTADRCIRFWNTTTNTHLSCMDTGSQVCNLVWSK-NVNELVSTH 396 (415)
Q Consensus 318 wd~~~~~~~~~~~~h~~~V~~l~~sp~~~~llasggg~~d~~I~iwd~~t~~~~~~~~~~~~V~~l~~s~-~~~~l~s~~ 396 (415)
||+++++.+..+.+|...|.+++|+|++..+|++++ .|+.|+|||+.+++++..+.|...|++++|+| ++..|++
T Consensus 254 wd~~~~~~~~~~~~~~~~v~~l~~sp~~~~~lasgs--~D~~i~iwd~~~~~~~~~~~H~~~V~~vafsP~d~~~l~s-- 329 (357)
T 4g56_B 254 VNIKNPDSAQTSAVHSQNITGLAYSYHSSPFLASIS--EDCTVAVLDADFSEVFRDLSHRDFVTGVAWSPLDHSKFTT-- 329 (357)
T ss_dssp EESSCGGGCEEECCCSSCEEEEEECSSSSCCEEEEE--TTSCEEEECTTSCEEEEECCCSSCEEEEEECSSSTTEEEE--
T ss_pred EECCCCcEeEEEeccceeEEEEEEcCCCCCEEEEEe--CCCEEEEEECCCCcEeEECCCCCCEEEEEEeCCCCCEEEE--
Confidence 999999999999999999999999999987899887 89999999999999999888999999999998 7888888
Q ss_pred ecCCCcEEEEECCCCc
Q 014934 397 GYSQNQIIVWRYPTMS 412 (415)
Q Consensus 397 g~~dg~I~vw~~~s~~ 412 (415)
++.|++|++|++++..
T Consensus 330 ~s~Dg~v~iW~~~~~~ 345 (357)
T 4g56_B 330 VGWDHKVLHHHLPSEG 345 (357)
T ss_dssp EETTSCEEEEECC---
T ss_pred EcCCCeEEEEECCCCC
Confidence 7789999999998753
No 7
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=5e-37 Score=303.30 Aligned_cols=240 Identities=22% Similarity=0.372 Sum_probs=220.2
Q ss_pred cceeEeecCC-CcEEEEE-cCCeEEEEECCCCCeEEeEecCCCCCeEEEEEcCCCCeEEEEECCCcEEEEECCCCeeeEE
Q 014934 168 FYLNLVDWSS-HNVLAVG-LGNCVYLWNACSSKVTKLCDLGIDDSVCSVGWANRNTHLAVGTSHGKVQIWDASRCKRVRT 245 (415)
Q Consensus 168 ~~i~~l~ws~-~~~la~~-~d~~V~iwd~~~~~~~~~~~~~~~~~V~~v~~sp~g~~la~g~~dg~V~iwd~~~~~~~~~ 245 (415)
-.|++++|+| +.+|++| .|+.|++||..+++....+. +|.+.|++++|+|+|++|++|+.||+|+|||+.+++++..
T Consensus 109 ~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~~~~~l~-~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~~~~~~~~ 187 (410)
T 1vyh_C 109 SPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLK-GHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRT 187 (410)
T ss_dssp SCEEEEEECSSSSEEEEEESSSCEEEEETTTCCCCEEEC-CCSSCEEEEEECTTSSEEEEEETTSCCCEEETTSSCEEEC
T ss_pred CcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEEe-ccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEE
Confidence 4699999999 6666666 68999999999999887776 8999999999999999999999999999999999999999
Q ss_pred ecCCCccEEEEEee--CCEEEEEeCCCcEEEEECCCCCccEEEeccccCCeEEEEEeCCCCEEEEEeCCCcEEEEECCCC
Q 014934 246 MEGHRLRVGALAWS--SSLLSSGSRDKSILQRDIRAQEDFVSKLSGHKSEVCGLKWSYDNRELASGGNDNRLFVWNQHST 323 (415)
Q Consensus 246 l~~h~~~V~~l~~~--~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~spdg~~lasg~~dg~I~iwd~~~~ 323 (415)
+.+|...|.+++|+ +++|++|+.|++|++||++++. .+..+.+|...|.++.|+|++.+|++|+.|+.|++||+.++
T Consensus 188 ~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~-~~~~~~~h~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~ 266 (410)
T 1vyh_C 188 MHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGY-CVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATK 266 (410)
T ss_dssp CCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCC-EEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTC
T ss_pred EcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCc-EEEEEeCCCccEEEEEECCCCCEEEEEcCCCeEEEEECCCC
Confidence 99999999999998 4799999999999999999887 67888999999999999999999999999999999999999
Q ss_pred ceeEEeccCCCcEEEEEEcCCC-------------------CcEEEEEcCCCCCeEEEEECCCCcEEEEee-CCCCEEEE
Q 014934 324 QPVLKYCEHTAAVKAIAWSPHL-------------------HGLLASGGGTADRCIRFWNTTTNTHLSCMD-TGSQVCNL 383 (415)
Q Consensus 324 ~~~~~~~~h~~~V~~l~~sp~~-------------------~~llasggg~~d~~I~iwd~~t~~~~~~~~-~~~~V~~l 383 (415)
+....+.+|...|.+++|+|++ ..+|++|+ .|+.|++||+.+++++..+. |...|.++
T Consensus 267 ~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs--~D~~i~iwd~~~~~~~~~~~~h~~~v~~v 344 (410)
T 1vyh_C 267 ECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGS--RDKTIKMWDVSTGMCLMTLVGHDNWVRGV 344 (410)
T ss_dssp CEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEE--TTSEEEEEETTTTEEEEEEECCSSCEEEE
T ss_pred ceeeEecCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEe--CCCeEEEEECCCCceEEEEECCCCcEEEE
Confidence 9999999999999999999973 23778877 89999999999999988876 67789999
Q ss_pred EECCCCCeEEEEEecCCCcEEEEECCCCcc
Q 014934 384 VWSKNVNELVSTHGYSQNQIIVWRYPTMSK 413 (415)
Q Consensus 384 ~~s~~~~~l~s~~g~~dg~I~vw~~~s~~~ 413 (415)
+|+|++++|++ |+.|+.|++||+.+.+.
T Consensus 345 ~~~~~g~~l~s--~s~D~~i~vwd~~~~~~ 372 (410)
T 1vyh_C 345 LFHSGGKFILS--CADDKTLRVWDYKNKRC 372 (410)
T ss_dssp EECSSSSCEEE--EETTTEEEEECCTTSCC
T ss_pred EEcCCCCEEEE--EeCCCeEEEEECCCCce
Confidence 99999999998 78999999999987654
No 8
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=7e-37 Score=292.46 Aligned_cols=236 Identities=22% Similarity=0.323 Sum_probs=216.4
Q ss_pred CcceeEeecCC-CcEEEEE-cCCeEEEEECCCCCeEEeEecCCCCCeEEEEEcCCCCeEEEEECCCcEEEEECCCCeeeE
Q 014934 167 DFYLNLVDWSS-HNVLAVG-LGNCVYLWNACSSKVTKLCDLGIDDSVCSVGWANRNTHLAVGTSHGKVQIWDASRCKRVR 244 (415)
Q Consensus 167 ~~~i~~l~ws~-~~~la~~-~d~~V~iwd~~~~~~~~~~~~~~~~~V~~v~~sp~g~~la~g~~dg~V~iwd~~~~~~~~ 244 (415)
...|.+++|++ +.+++++ .|+.|++||+.+++....+. .+...+.+++|+|+|++|++|+.+|.|++||+.+++...
T Consensus 80 ~~~v~~~~~~~~~~~l~s~s~D~~i~lWd~~~~~~~~~~~-~~~~~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~~~~~ 158 (321)
T 3ow8_A 80 QLGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQIKSID-AGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEY 158 (321)
T ss_dssp SSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEE-CCTTCCCCEEECTTSSEEEEECTTSEEEEEETTTCSEEE
T ss_pred CCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCCEEEEEe-CCCccEEEEEECCCCCEEEEEcCCCcEEEEEcCCCceeE
Confidence 34589999999 6666666 68999999999998887776 667889999999999999999999999999999999999
Q ss_pred EecCCCccEEEEEee--CCEEEEEeCCCcEEEEECCCCCccEEEeccccCCeEEEEEeCCCCEEEEEeCCCcEEEEECCC
Q 014934 245 TMEGHRLRVGALAWS--SSLLSSGSRDKSILQRDIRAQEDFVSKLSGHKSEVCGLKWSYDNRELASGGNDNRLFVWNQHS 322 (415)
Q Consensus 245 ~l~~h~~~V~~l~~~--~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~spdg~~lasg~~dg~I~iwd~~~ 322 (415)
.+..|...|.+++|+ +++|++|+.||.|++||++++. .+..+.+|...|.+++|+|++++|++|+.|+.|+|||+++
T Consensus 159 ~~~~~~~~v~~~~~spdg~~lasg~~dg~i~iwd~~~~~-~~~~~~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~ 237 (321)
T 3ow8_A 159 SLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGK-LLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQH 237 (321)
T ss_dssp EEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTE-EEEEECCCSSCCCEEEECTTSCEEEEECTTSCEEEEETTT
T ss_pred EecCCCceEEEEEECCCCCEEEEEcCCCeEEEEECCCCc-EEEEEcccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCC
Confidence 999999999999998 5799999999999999999886 6788899999999999999999999999999999999999
Q ss_pred CceeEEeccCCCcEEEEEEcCCCCcEEEEEcCCCCCeEEEEECCCCcEEEEee-CCCCEEEEEECCCCCeEEEEEecCCC
Q 014934 323 TQPVLKYCEHTAAVKAIAWSPHLHGLLASGGGTADRCIRFWNTTTNTHLSCMD-TGSQVCNLVWSKNVNELVSTHGYSQN 401 (415)
Q Consensus 323 ~~~~~~~~~h~~~V~~l~~sp~~~~llasggg~~d~~I~iwd~~t~~~~~~~~-~~~~V~~l~~s~~~~~l~s~~g~~dg 401 (415)
++.+..+.+|...|.+++|+|++. +|++++ .|+.|++||+.+++++..+. +...|.+++|+++++.|++ ++.|+
T Consensus 238 ~~~~~~~~~h~~~v~~~~~sp~~~-~l~s~s--~D~~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~s--~~~d~ 312 (321)
T 3ow8_A 238 ANLAGTLSGHASWVLNVAFCPDDT-HFVSSS--SDKSVKVWDVGTRTCVHTFFDHQDQVWGVKYNGNGSKIVS--VGDDQ 312 (321)
T ss_dssp CCEEEEECCCSSCEEEEEECTTSS-EEEEEE--TTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEE--EETTC
T ss_pred cceeEEEcCCCCceEEEEECCCCC-EEEEEe--CCCcEEEEeCCCCEEEEEEcCCCCcEEEEEECCCCCEEEE--EeCCC
Confidence 999999999999999999999987 667776 89999999999999998875 6788999999999999998 77999
Q ss_pred cEEEEECC
Q 014934 402 QIIVWRYP 409 (415)
Q Consensus 402 ~I~vw~~~ 409 (415)
.|+|||+|
T Consensus 313 ~i~vwd~p 320 (321)
T 3ow8_A 313 EIHIYDCP 320 (321)
T ss_dssp CEEEEECC
T ss_pred eEEEEeCC
Confidence 99999986
No 9
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=6e-36 Score=287.88 Aligned_cols=239 Identities=17% Similarity=0.314 Sum_probs=215.1
Q ss_pred cceeEeecCC-CcEEEEE-cCCeEEEEECCCCCeEEeEecCCCCCeEEEEEcCCCCeEEEEECCCcEEEEECCCC----e
Q 014934 168 FYLNLVDWSS-HNVLAVG-LGNCVYLWNACSSKVTKLCDLGIDDSVCSVGWANRNTHLAVGTSHGKVQIWDASRC----K 241 (415)
Q Consensus 168 ~~i~~l~ws~-~~~la~~-~d~~V~iwd~~~~~~~~~~~~~~~~~V~~v~~sp~g~~la~g~~dg~V~iwd~~~~----~ 241 (415)
-.|.+++|++ +++|+++ .|+.|++||..+++....+. .|...|.+++|+|+|++|++|+.||.|++||+.+. +
T Consensus 56 ~~v~~~~~s~d~~~l~s~s~Dg~v~iWd~~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~s~~~d~~v~iw~~~~~~~~~~ 134 (340)
T 1got_B 56 AKIYAMHWGTDSRLLLSASQDGKLIIWDSYTTNKVHAIP-LRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVR 134 (340)
T ss_dssp SCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEE-CSSSCEEEEEECTTSSEEEEEETTCEEEEEETTTCSBSCE
T ss_pred CceEEEEECCCCCEEEEEeCCCcEEEEECCCCCcceEee-cCCccEEEEEECCCCCEEEEEeCCCeEEEEECccCCCcce
Confidence 3589999999 6666666 68999999999998877776 67889999999999999999999999999999765 4
Q ss_pred eeEEecCCCccEEEEEee-CCEEEEEeCCCcEEEEECCCCCccEEEeccccCCeEEEEEeCCCCEEEEEeCCCcEEEEEC
Q 014934 242 RVRTMEGHRLRVGALAWS-SSLLSSGSRDKSILQRDIRAQEDFVSKLSGHKSEVCGLKWSYDNRELASGGNDNRLFVWNQ 320 (415)
Q Consensus 242 ~~~~l~~h~~~V~~l~~~-~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~spdg~~lasg~~dg~I~iwd~ 320 (415)
....+.+|...|.++.|. +..+++++.|++|++||++++. .+..+.+|...|.+++|+|++++|++|+.|+.|++||+
T Consensus 135 ~~~~~~~h~~~v~~~~~~~~~~l~s~s~d~~i~~wd~~~~~-~~~~~~~h~~~v~~~~~~~~~~~l~sg~~d~~v~~wd~ 213 (340)
T 1got_B 135 VSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQ-QTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDV 213 (340)
T ss_dssp EEEEEECCSSCEEEEEEEETTEEEEEETTSCEEEEETTTTE-EEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEET
T ss_pred eEEEecCCCccEEEEEECCCCcEEEEECCCcEEEEECCCCc-EEEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEEC
Confidence 566788999999999998 5789999999999999999886 57888999999999999999999999999999999999
Q ss_pred CCCceeEEeccCCCcEEEEEEcCCCCcEEEEEcCCCCCeEEEEECCCCcEEEEeeCC---CCEEEEEECCCCCeEEEEEe
Q 014934 321 HSTQPVLKYCEHTAAVKAIAWSPHLHGLLASGGGTADRCIRFWNTTTNTHLSCMDTG---SQVCNLVWSKNVNELVSTHG 397 (415)
Q Consensus 321 ~~~~~~~~~~~h~~~V~~l~~sp~~~~llasggg~~d~~I~iwd~~t~~~~~~~~~~---~~V~~l~~s~~~~~l~s~~g 397 (415)
++++.+..+.+|...|.+++|+|++. +|++++ .|+.|++||+++++.+..+.+. ..|.+++|+|++++|++ |
T Consensus 214 ~~~~~~~~~~~h~~~v~~v~~~p~~~-~l~s~s--~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~--g 288 (340)
T 1got_B 214 REGMCRQTFTGHESDINAICFFPNGN-AFATGS--DDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLA--G 288 (340)
T ss_dssp TTCSEEEEECCCSSCEEEEEECTTSS-EEEEEE--TTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEE--E
T ss_pred CCCeeEEEEcCCcCCEEEEEEcCCCC-EEEEEc--CCCcEEEEECCCCcEEEEEccCCcccceEEEEECCCCCEEEE--E
Confidence 99999999999999999999999987 677776 8999999999999888777644 36999999999999999 7
Q ss_pred cCCCcEEEEECCCCcc
Q 014934 398 YSQNQIIVWRYPTMSK 413 (415)
Q Consensus 398 ~~dg~I~vw~~~s~~~ 413 (415)
+.|+.|++||+.+.+.
T Consensus 289 ~~d~~i~vwd~~~~~~ 304 (340)
T 1got_B 289 YDDFNCNVWDALKADR 304 (340)
T ss_dssp ETTSEEEEEETTTCCE
T ss_pred CCCCeEEEEEcccCcE
Confidence 8999999999987654
No 10
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=2.8e-36 Score=288.31 Aligned_cols=242 Identities=19% Similarity=0.322 Sum_probs=215.4
Q ss_pred CCcceeEeecCCC-----cEEEEE-cCCeEEEEECCCCCeEEeEec-CCCCCeEEEEEcCCCCeEEEEECCCcEEEEECC
Q 014934 166 DDFYLNLVDWSSH-----NVLAVG-LGNCVYLWNACSSKVTKLCDL-GIDDSVCSVGWANRNTHLAVGTSHGKVQIWDAS 238 (415)
Q Consensus 166 ~~~~i~~l~ws~~-----~~la~~-~d~~V~iwd~~~~~~~~~~~~-~~~~~V~~v~~sp~g~~la~g~~dg~V~iwd~~ 238 (415)
..-.|.+++|++. .+|++| .|+.|++|+..+++......+ +|...|.+++|++++.++++|+.||.|++||+.
T Consensus 31 H~~~V~~v~~~~~~~~~~~~l~tgs~D~~v~vW~~~~~~~~~~~~l~gh~~~v~~~~~~~~~~~l~s~s~D~~i~lWd~~ 110 (321)
T 3ow8_A 31 HDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERLDLQWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLE 110 (321)
T ss_dssp SSSCEEEEEEC-------CEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEETT
T ss_pred CCCcEEEEEEecCCCCCCCEEEEEcCCCCEEEEECCCCCeeeeeeeccCCCCEEEEEECCCCCEEEEEeCCCcEEEEECC
Confidence 3457999999872 355555 689999999987765443322 899999999999999999999999999999999
Q ss_pred CCeeeEEecCCCccEEEEEee--CCEEEEEeCCCcEEEEECCCCCccEEEeccccCCeEEEEEeCCCCEEEEEeCCCcEE
Q 014934 239 RCKRVRTMEGHRLRVGALAWS--SSLLSSGSRDKSILQRDIRAQEDFVSKLSGHKSEVCGLKWSYDNRELASGGNDNRLF 316 (415)
Q Consensus 239 ~~~~~~~l~~h~~~V~~l~~~--~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~spdg~~lasg~~dg~I~ 316 (415)
+++.+..+..|...+.+++|+ +.+|++|+.||.|++||++.+. ....+..|...|.+++|+|++++||+|+.|+.|+
T Consensus 111 ~~~~~~~~~~~~~~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~~-~~~~~~~~~~~v~~~~~spdg~~lasg~~dg~i~ 189 (321)
T 3ow8_A 111 NGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGK-KEYSLDTRGKFILSIAYSPDGKYLASGAIDGIIN 189 (321)
T ss_dssp TTEEEEEEECCTTCCCCEEECTTSSEEEEECTTSEEEEEETTTCS-EEEEEECSSSCEEEEEECTTSSEEEEEETTSCEE
T ss_pred CCCEEEEEeCCCccEEEEEECCCCCEEEEEcCCCcEEEEEcCCCc-eeEEecCCCceEEEEEECCCCCEEEEEcCCCeEE
Confidence 999999999999999999998 4799999999999999999887 4667788999999999999999999999999999
Q ss_pred EEECCCCceeEEeccCCCcEEEEEEcCCCCcEEEEEcCCCCCeEEEEECCCCcEEEEee-CCCCEEEEEECCCCCeEEEE
Q 014934 317 VWNQHSTQPVLKYCEHTAAVKAIAWSPHLHGLLASGGGTADRCIRFWNTTTNTHLSCMD-TGSQVCNLVWSKNVNELVST 395 (415)
Q Consensus 317 iwd~~~~~~~~~~~~h~~~V~~l~~sp~~~~llasggg~~d~~I~iwd~~t~~~~~~~~-~~~~V~~l~~s~~~~~l~s~ 395 (415)
+||+++++.+..+.+|...|.+++|+|++. +|++++ .|+.|++||+.+++.+..+. +...|.+++|+|++.+|++
T Consensus 190 iwd~~~~~~~~~~~~h~~~v~~l~~spd~~-~l~s~s--~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s- 265 (321)
T 3ow8_A 190 IFDIATGKLLHTLEGHAMPIRSLTFSPDSQ-LLVTAS--DDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVS- 265 (321)
T ss_dssp EEETTTTEEEEEECCCSSCCCEEEECTTSC-EEEEEC--TTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEE-
T ss_pred EEECCCCcEEEEEcccCCceeEEEEcCCCC-EEEEEc--CCCeEEEEECCCcceeEEEcCCCCceEEEEECCCCCEEEE-
Confidence 999999999999999999999999999987 777776 89999999999999888876 6678999999999999998
Q ss_pred EecCCCcEEEEECCCCcc
Q 014934 396 HGYSQNQIIVWRYPTMSK 413 (415)
Q Consensus 396 ~g~~dg~I~vw~~~s~~~ 413 (415)
|+.|+.|+|||+.+.+.
T Consensus 266 -~s~D~~v~iwd~~~~~~ 282 (321)
T 3ow8_A 266 -SSSDKSVKVWDVGTRTC 282 (321)
T ss_dssp -EETTSCEEEEETTTTEE
T ss_pred -EeCCCcEEEEeCCCCEE
Confidence 77899999999988764
No 11
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=4.2e-36 Score=296.69 Aligned_cols=235 Identities=19% Similarity=0.347 Sum_probs=213.8
Q ss_pred cceeEeecCC-CcEEEEE-cCCeEEEEECCCCCeEEeEecCCCCCeEEEEEcCCCCeEEEEECCCcEEEEECCCCeeeEE
Q 014934 168 FYLNLVDWSS-HNVLAVG-LGNCVYLWNACSSKVTKLCDLGIDDSVCSVGWANRNTHLAVGTSHGKVQIWDASRCKRVRT 245 (415)
Q Consensus 168 ~~i~~l~ws~-~~~la~~-~d~~V~iwd~~~~~~~~~~~~~~~~~V~~v~~sp~g~~la~g~~dg~V~iwd~~~~~~~~~ 245 (415)
-.|.+++|++ +++|++| .|+.|++||+.+++....+. +|...|.+++|+|+|++|++|+.||.|++||+.++.++..
T Consensus 151 ~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~~~~~~~~~~-~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~~ 229 (410)
T 1vyh_C 151 DSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMH-GHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKT 229 (410)
T ss_dssp SCEEEEEECTTSSEEEEEETTSCCCEEETTSSCEEECCC-CCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEE
T ss_pred CcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEc-CCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEE
Confidence 3589999999 6677666 68999999999988877765 8899999999999999999999999999999999999999
Q ss_pred ecCCCccEEEEEee--CCEEEEEeCCCcEEEEECCCCCccEEEeccccCCeEEEEEeCC--------------------C
Q 014934 246 MEGHRLRVGALAWS--SSLLSSGSRDKSILQRDIRAQEDFVSKLSGHKSEVCGLKWSYD--------------------N 303 (415)
Q Consensus 246 l~~h~~~V~~l~~~--~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~spd--------------------g 303 (415)
+.+|...|.++.|+ +.+|++|+.|++|++||+++.. ....+.+|...|.+++|+|+ +
T Consensus 230 ~~~h~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~-~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 308 (410)
T 1vyh_C 230 FTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKE-CKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPG 308 (410)
T ss_dssp EECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCC-EEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------C
T ss_pred EeCCCccEEEEEECCCCCEEEEEcCCCeEEEEECCCCc-eeeEecCCCceEEEEEEcCcccccchhhhccccccccCCCC
Confidence 99999999999998 5799999999999999999886 57788999999999999996 6
Q ss_pred CEEEEEeCCCcEEEEECCCCceeEEeccCCCcEEEEEEcCCCCcEEEEEcCCCCCeEEEEECCCCcEEEEee-CCCCEEE
Q 014934 304 RELASGGNDNRLFVWNQHSTQPVLKYCEHTAAVKAIAWSPHLHGLLASGGGTADRCIRFWNTTTNTHLSCMD-TGSQVCN 382 (415)
Q Consensus 304 ~~lasg~~dg~I~iwd~~~~~~~~~~~~h~~~V~~l~~sp~~~~llasggg~~d~~I~iwd~~t~~~~~~~~-~~~~V~~ 382 (415)
.+|++|+.|+.|++||+++++++..+.+|...|.+++|+|++. +|++++ .|+.|++||+.+++++..+. |...|.+
T Consensus 309 ~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~~v~~v~~~~~g~-~l~s~s--~D~~i~vwd~~~~~~~~~~~~h~~~v~~ 385 (410)
T 1vyh_C 309 PFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGK-FILSCA--DDKTLRVWDYKNKRCMKTLNAHEHFVTS 385 (410)
T ss_dssp CEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSS-CEEEEE--TTTEEEEECCTTSCCCEEEECCSSCEEE
T ss_pred CEEEEEeCCCeEEEEECCCCceEEEEECCCCcEEEEEEcCCCC-EEEEEe--CCCeEEEEECCCCceEEEEcCCCCcEEE
Confidence 7999999999999999999999999999999999999999998 555665 79999999999999888886 6778999
Q ss_pred EEECCCCCeEEEEEecCCCcEEEEECC
Q 014934 383 LVWSKNVNELVSTHGYSQNQIIVWRYP 409 (415)
Q Consensus 383 l~~s~~~~~l~s~~g~~dg~I~vw~~~ 409 (415)
++|+|++.+|++ |+.|+.|+||++.
T Consensus 386 l~~~~~~~~l~s--gs~D~~i~vW~~r 410 (410)
T 1vyh_C 386 LDFHKTAPYVVT--GSVDQTVKVWECR 410 (410)
T ss_dssp EEECSSSSCEEE--EETTSEEEEEC--
T ss_pred EEEcCCCCEEEE--EeCCCcEEEEeCC
Confidence 999999999998 7899999999863
No 12
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=1.9e-35 Score=288.83 Aligned_cols=242 Identities=19% Similarity=0.347 Sum_probs=200.6
Q ss_pred cceeEeecCC-CcEEEEE-cCCeEEEEECCCCCeEEeEecCCCCCeEEEEEcCCCC------------------------
Q 014934 168 FYLNLVDWSS-HNVLAVG-LGNCVYLWNACSSKVTKLCDLGIDDSVCSVGWANRNT------------------------ 221 (415)
Q Consensus 168 ~~i~~l~ws~-~~~la~~-~d~~V~iwd~~~~~~~~~~~~~~~~~V~~v~~sp~g~------------------------ 221 (415)
-.|++++|+| +++|++| .|++|+|||..+++....+. .|...|.+++|+|+|+
T Consensus 67 ~~V~~~~~sp~~~~l~s~s~D~~v~iWd~~~~~~~~~~~-~h~~~v~~~~~s~~g~~las~~~d~~v~iw~~~~~~~~~~ 145 (380)
T 3iz6_a 67 GKVYSLDWTPEKNWIVSASQDGRLIVWNALTSQKTHAIK-LHCPWVMECAFAPNGQSVACGGLDSACSIFNLSSQADRDG 145 (380)
T ss_dssp SCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEE-CCCTTCCCCEECTTSSEEEECCSSSCCEEEECCCCSSCCC
T ss_pred cEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCccceEEe-cCCCCEEEEEECCCCCEEEEeeCCCcEEEEECCCCccccC
Confidence 4699999999 6666655 68999999998887666554 4555555555555443
Q ss_pred --------------------------eEEEEECCCcEEEEECCCCeeeEEe-----cCCCccEEEEEee---CCEEEEEe
Q 014934 222 --------------------------HLAVGTSHGKVQIWDASRCKRVRTM-----EGHRLRVGALAWS---SSLLSSGS 267 (415)
Q Consensus 222 --------------------------~la~g~~dg~V~iwd~~~~~~~~~l-----~~h~~~V~~l~~~---~~~l~sgs 267 (415)
.|++|+.||+|++||+.+++.+..+ .+|...|.+++|+ +++|++|+
T Consensus 146 ~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs 225 (380)
T 3iz6_a 146 NMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMFISGS 225 (380)
T ss_dssp SSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEE
T ss_pred CccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCEEEEEE
Confidence 4666666777777777777777666 5788999999996 57999999
Q ss_pred CCCcEEEEECCCCCccEEEeccccCCeEEEEEeCCCCEEEEEeCCCcEEEEECCCCceeEEeccCC-------CcEEEEE
Q 014934 268 RDKSILQRDIRAQEDFVSKLSGHKSEVCGLKWSYDNRELASGGNDNRLFVWNQHSTQPVLKYCEHT-------AAVKAIA 340 (415)
Q Consensus 268 ~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~spdg~~lasg~~dg~I~iwd~~~~~~~~~~~~h~-------~~V~~l~ 340 (415)
.|++|++||++.....+..+.+|...|.+++|+|++++|++|+.|+.|+|||+++++.+..+..+. ..|.+++
T Consensus 226 ~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 305 (380)
T 3iz6_a 226 CDTTVRLWDLRITSRAVRTYHGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVA 305 (380)
T ss_dssp TTSCEEEEETTTTCCCCEEECCCSSCCCEEEECTTSSEEEEECSSSCEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEE
T ss_pred CCCeEEEEECCCCCcceEEECCcCCCeEEEEEecCCCeEEEEcCCCeEEEEECCCCcEEEEecccccccccccCceEEEE
Confidence 999999999986655678899999999999999999999999999999999999999888876543 2489999
Q ss_pred EcCCCCcEEEEEcCCCCCeEEEEECCCCcEEEEe-----eCCCCEEEEEECCCCCeEEEEEecCCCcEEEEECCCCcccC
Q 014934 341 WSPHLHGLLASGGGTADRCIRFWNTTTNTHLSCM-----DTGSQVCNLVWSKNVNELVSTHGYSQNQIIVWRYPTMSKVL 415 (415)
Q Consensus 341 ~sp~~~~llasggg~~d~~I~iwd~~t~~~~~~~-----~~~~~V~~l~~s~~~~~l~s~~g~~dg~I~vw~~~s~~~ll 415 (415)
|+|++. +|++|+ .|+.|++||+.+++.+..+ .|...|.+++|+|+|.+|++ |+.|+.|+||++...++++
T Consensus 306 ~s~~g~-~l~~g~--~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s--gs~D~~i~iW~~~~~~~iv 380 (380)
T 3iz6_a 306 FSISGR-LLFAGY--SNGDCYVWDTLLAEMVLNLGTLQNSHEGRISCLGLSSDGSALCT--GSWDKNLKIWAFSGHRKIV 380 (380)
T ss_dssp ECSSSS-EEEEEC--TTSCEEEEETTTCCEEEEECCSCSSCCCCCCEEEECSSSSEEEE--ECTTSCEEEEECCSSSSCC
T ss_pred ECCCCC-EEEEEE--CCCCEEEEECCCCceEEEEecccCCCCCceEEEEECCCCCEEEE--eeCCCCEEEEecCCCcccC
Confidence 999998 666666 8999999999999988776 26678999999999999999 8899999999999887764
No 13
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=3.1e-34 Score=277.77 Aligned_cols=233 Identities=18% Similarity=0.352 Sum_probs=201.2
Q ss_pred ceeEeecCC-CcEEEEE-cCCeEEEEECCCCCeEEeEe------------------------------------------
Q 014934 169 YLNLVDWSS-HNVLAVG-LGNCVYLWNACSSKVTKLCD------------------------------------------ 204 (415)
Q Consensus 169 ~i~~l~ws~-~~~la~~-~d~~V~iwd~~~~~~~~~~~------------------------------------------ 204 (415)
.|++++|+| +..|+++ .|+.|++||..+++....+.
T Consensus 66 ~V~~~~~s~d~~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~~~~v~~~~~sp~g~~lasg~~d~~i~v~~~~~~~~~~~~~ 145 (354)
T 2pbi_B 66 KVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCAIACGGLDNKCSVYPLTFDKNENMAA 145 (354)
T ss_dssp CEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCEEEECTTSSEEEEESTTSEEEEEECCCCTTCCSGG
T ss_pred eEEEEEECCCCCEEEEEeCCCeEEEEECCCCCcceEEecCCCCEEEEEECCCCCEEEEeeCCCCEEEEEEeccccccccc
Confidence 478888888 5555555 57888888876655432221
Q ss_pred -----cCCCCCeEEEEEcCCCCeEEEEECCCcEEEEECCCCeeeEEecCCCccEEEEEee----CCEEEEEeCCCcEEEE
Q 014934 205 -----LGIDDSVCSVGWANRNTHLAVGTSHGKVQIWDASRCKRVRTMEGHRLRVGALAWS----SSLLSSGSRDKSILQR 275 (415)
Q Consensus 205 -----~~~~~~V~~v~~sp~g~~la~g~~dg~V~iwd~~~~~~~~~l~~h~~~V~~l~~~----~~~l~sgs~dg~I~iw 275 (415)
..|...|.+++|+|++..|++|+.||+|++||+.+++.+..+.+|...|.+++|+ +++|++|+.||.|++|
T Consensus 146 ~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~w 225 (354)
T 2pbi_B 146 KKKSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVW 225 (354)
T ss_dssp GCEEEEECSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECCCSSCCEEEEEETTSCEEEE
T ss_pred cceeeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCeEEEEEcCCCCCeEEEEEEeCCCCCEEEEEeCCCeEEEE
Confidence 1467789999999999999999999999999999999999999999999999986 3699999999999999
Q ss_pred ECCCCCccEEEeccccCCeEEEEEeCCCCEEEEEeCCCcEEEEECCCCceeEEeccC--CCcEEEEEEcCCCCcEEEEEc
Q 014934 276 DIRAQEDFVSKLSGHKSEVCGLKWSYDNRELASGGNDNRLFVWNQHSTQPVLKYCEH--TAAVKAIAWSPHLHGLLASGG 353 (415)
Q Consensus 276 d~~~~~~~~~~~~~h~~~V~~l~~spdg~~lasg~~dg~I~iwd~~~~~~~~~~~~h--~~~V~~l~~sp~~~~llasgg 353 (415)
|++++. .+..+.+|...|.+++|+|++.+||+|+.|+.|++||+++++.+..+..+ ...+.+++|+|++. +|++++
T Consensus 226 d~~~~~-~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~s~~g~-~l~~g~ 303 (354)
T 2pbi_B 226 DMRSGQ-CVQAFETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRADREVAIYSKESIIFGASSVDFSLSGR-LLFAGY 303 (354)
T ss_dssp ETTTCC-EEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSS-EEEEEE
T ss_pred ECCCCc-EEEEecCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCcccceeEEEEeCCCC-EEEEEE
Confidence 999887 67888999999999999999999999999999999999998877776543 45789999999997 666766
Q ss_pred CCCCCeEEEEECCCCcEEEEee-CCCCEEEEEECCCCCeEEEEEecCCCcEEEEE
Q 014934 354 GTADRCIRFWNTTTNTHLSCMD-TGSQVCNLVWSKNVNELVSTHGYSQNQIIVWR 407 (415)
Q Consensus 354 g~~d~~I~iwd~~t~~~~~~~~-~~~~V~~l~~s~~~~~l~s~~g~~dg~I~vw~ 407 (415)
.|+.|++||+.+++.+..+. |...|.+++|+|++++|++ |+.|+.|+||+
T Consensus 304 --~d~~i~vwd~~~~~~~~~l~~h~~~v~~l~~spdg~~l~s--gs~D~~v~vW~ 354 (354)
T 2pbi_B 304 --NDYTINVWDVLKGSRVSILFGHENRVSTLRVSPDGTAFCS--GSWDHTLRVWA 354 (354)
T ss_dssp --TTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSCEEE--EETTSEEEEEC
T ss_pred --CCCcEEEEECCCCceEEEEECCCCcEEEEEECCCCCEEEE--EcCCCCEEecC
Confidence 89999999999999887775 7788999999999999999 78999999996
No 14
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=2.8e-34 Score=276.21 Aligned_cols=232 Identities=18% Similarity=0.334 Sum_probs=205.2
Q ss_pred cceeEeecCC-CcEEEEE-cCCeEEEEECCCCC----eEEeEecCCCCCeEEEEEcCCCCeEEEEECCCcEEEEECCCCe
Q 014934 168 FYLNLVDWSS-HNVLAVG-LGNCVYLWNACSSK----VTKLCDLGIDDSVCSVGWANRNTHLAVGTSHGKVQIWDASRCK 241 (415)
Q Consensus 168 ~~i~~l~ws~-~~~la~~-~d~~V~iwd~~~~~----~~~~~~~~~~~~V~~v~~sp~g~~la~g~~dg~V~iwd~~~~~ 241 (415)
..+.+++|+| +++|+++ .|+.|++|++.+++ ....+. +|.+.|.++.|++++. +++|+.||.|++||+.+++
T Consensus 98 ~~v~~~~~s~~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~-l~s~s~d~~i~~wd~~~~~ 175 (340)
T 1got_B 98 SWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELA-GHTGYLSCCRFLDDNQ-IVTSSGDTTCALWDIETGQ 175 (340)
T ss_dssp SCEEEEEECTTSSEEEEEETTCEEEEEETTTCSBSCEEEEEEE-CCSSCEEEEEEEETTE-EEEEETTSCEEEEETTTTE
T ss_pred ccEEEEEECCCCCEEEEEeCCCeEEEEECccCCCcceeEEEec-CCCccEEEEEECCCCc-EEEEECCCcEEEEECCCCc
Confidence 3588999999 6777766 68999999998764 223333 8899999999998875 8899999999999999999
Q ss_pred eeEEecCCCccEEEEEee--CCEEEEEeCCCcEEEEECCCCCccEEEeccccCCeEEEEEeCCCCEEEEEeCCCcEEEEE
Q 014934 242 RVRTMEGHRLRVGALAWS--SSLLSSGSRDKSILQRDIRAQEDFVSKLSGHKSEVCGLKWSYDNRELASGGNDNRLFVWN 319 (415)
Q Consensus 242 ~~~~l~~h~~~V~~l~~~--~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~spdg~~lasg~~dg~I~iwd 319 (415)
.+..+.+|...|.+++|+ +.+|++|+.|+.|++||++++. ....+.+|...|.+++|+|++++|++|+.|+.|++||
T Consensus 176 ~~~~~~~h~~~v~~~~~~~~~~~l~sg~~d~~v~~wd~~~~~-~~~~~~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd 254 (340)
T 1got_B 176 QTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGM-CRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFD 254 (340)
T ss_dssp EEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCS-EEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred EEEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCe-eEEEEcCCcCCEEEEEEcCCCCEEEEEcCCCcEEEEE
Confidence 999999999999999998 4699999999999999999886 5788899999999999999999999999999999999
Q ss_pred CCCCceeEEecc--CCCcEEEEEEcCCCCcEEEEEcCCCCCeEEEEECCCCcEEEEee-CCCCEEEEEECCCCCeEEEEE
Q 014934 320 QHSTQPVLKYCE--HTAAVKAIAWSPHLHGLLASGGGTADRCIRFWNTTTNTHLSCMD-TGSQVCNLVWSKNVNELVSTH 396 (415)
Q Consensus 320 ~~~~~~~~~~~~--h~~~V~~l~~sp~~~~llasggg~~d~~I~iwd~~t~~~~~~~~-~~~~V~~l~~s~~~~~l~s~~ 396 (415)
+++++.+..+.. +...|.+++|+|++. +|++|+ .|+.|++||+.+++.+..+. |...|.+++|+|++.+|++
T Consensus 255 ~~~~~~~~~~~~~~~~~~v~~~~~s~~g~-~l~~g~--~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s-- 329 (340)
T 1got_B 255 LRADQELMTYSHDNIICGITSVSFSKSGR-LLLAGY--DDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVAT-- 329 (340)
T ss_dssp TTTTEEEEEECCTTCCSCEEEEEECTTSS-EEEEEE--TTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSCEEE--
T ss_pred CCCCcEEEEEccCCcccceEEEEECCCCC-EEEEEC--CCCeEEEEEcccCcEeeEeecCCCcEEEEEEcCCCCEEEE--
Confidence 999988877743 335799999999997 666766 89999999999999888776 6788999999999999999
Q ss_pred ecCCCcEEEEE
Q 014934 397 GYSQNQIIVWR 407 (415)
Q Consensus 397 g~~dg~I~vw~ 407 (415)
|+.|+.|+|||
T Consensus 330 ~s~D~~i~iWd 340 (340)
T 1got_B 330 GSWDSFLKIWN 340 (340)
T ss_dssp EETTSCEEEEC
T ss_pred EcCCccEEecC
Confidence 78999999996
No 15
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=2.7e-35 Score=284.39 Aligned_cols=238 Identities=17% Similarity=0.242 Sum_probs=198.1
Q ss_pred ceeEeecCC-CcEEEEEcCCeEEEEECCCC----------CeEEeEecCCCCCeEEEEEcCCCCeEEEEECCCcEEEEEC
Q 014934 169 YLNLVDWSS-HNVLAVGLGNCVYLWNACSS----------KVTKLCDLGIDDSVCSVGWANRNTHLAVGTSHGKVQIWDA 237 (415)
Q Consensus 169 ~i~~l~ws~-~~~la~~~d~~V~iwd~~~~----------~~~~~~~~~~~~~V~~v~~sp~g~~la~g~~dg~V~iwd~ 237 (415)
.|++++|+| +.+|+++.++++++||.... .........+...|.+++|+|++ .|++|+.||.|+|||+
T Consensus 32 ~v~~~~fs~dG~~l~~~sd~~~r~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~-~l~~~s~dg~v~lWd~ 110 (344)
T 4gqb_B 32 QLEAARYRSDGALLLGASSLSGRCWAGSLWLFKDPCAAPNEGFCSAGVQTEAGVADLTWVGER-GILVASDSGAVELWEL 110 (344)
T ss_dssp EEEEEEECTTSCEEEEEECCSSSCCCEEEEEESSGGGTTCGGGCSEEEEESSCEEEEEEETTT-EEEEEETTSEEEEEEE
T ss_pred CEEEEEECCCCCEEEEEeCCceEEeeceeeeeccccccCCcceeeeeeccCCCEEEEEEeCCC-eEEEEECCCEEEEEec
Confidence 589999999 88898888888888863210 00011111345789999999985 6889999999999999
Q ss_pred CCCeeeEE----ecCCCccEEEEEee--CCEEEEEeCCCcEEEEECCCCCccEEEeccccCCeEEEEEeCCC-CEEEEEe
Q 014934 238 SRCKRVRT----MEGHRLRVGALAWS--SSLLSSGSRDKSILQRDIRAQEDFVSKLSGHKSEVCGLKWSYDN-RELASGG 310 (415)
Q Consensus 238 ~~~~~~~~----l~~h~~~V~~l~~~--~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~spdg-~~lasg~ 310 (415)
.+++.+.. +.+|...|.+++|+ +++|++|+.|++|++||++++. .+..+.+|...|.+++|+|++ .+|++|+
T Consensus 111 ~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~~-~~~~~~~h~~~V~~~~~~~~~~~~l~s~s 189 (344)
T 4gqb_B 111 DENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQV-VLSSYRAHAAQVTCVAASPHKDSVFLSCS 189 (344)
T ss_dssp CTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTE-EEEEECCCSSCEEEEEECSSCTTEEEEEE
T ss_pred cCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCc-EEEEEcCcCCceEEEEecCCCCCceeeec
Confidence 98875543 34899999999998 5799999999999999999886 688899999999999999988 4789999
Q ss_pred CCCcEEEEECCCCceeEEec--cCCCcEEEEEEcCCCCcEEEEEcCCCCCeEEEEECCCCcEEEEee-CCCCEEEEEECC
Q 014934 311 NDNRLFVWNQHSTQPVLKYC--EHTAAVKAIAWSPHLHGLLASGGGTADRCIRFWNTTTNTHLSCMD-TGSQVCNLVWSK 387 (415)
Q Consensus 311 ~dg~I~iwd~~~~~~~~~~~--~h~~~V~~l~~sp~~~~llasggg~~d~~I~iwd~~t~~~~~~~~-~~~~V~~l~~s~ 387 (415)
.|+.|+|||+++++++..+. .|...+.+++|+|++..+|++|+ .|+.|++||+++++++..+. |...|.+++|+|
T Consensus 190 ~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~--~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~fsp 267 (344)
T 4gqb_B 190 EDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGD--ENGTVSLVDTKSTSCVLSSAVHSQCVTGLVFSP 267 (344)
T ss_dssp TTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEE--TTSEEEEEESCC--CCEEEECCSSCEEEEEECS
T ss_pred cccccccccccccceeeeeecceeeccceeeeecCCCCcceEEec--cCCcEEEEECCCCcEEEEEcCCCCCEEEEEEcc
Confidence 99999999999999888774 45667999999998888999987 89999999999999988886 678899999999
Q ss_pred CCC-eEEEEEecCCCcEEEEECCCCc
Q 014934 388 NVN-ELVSTHGYSQNQIIVWRYPTMS 412 (415)
Q Consensus 388 ~~~-~l~s~~g~~dg~I~vw~~~s~~ 412 (415)
++. +|++ |+.|+.|+|||+.+.+
T Consensus 268 ~g~~~las--gs~D~~i~vwd~~~~~ 291 (344)
T 4gqb_B 268 HSVPFLAS--LSEDCSLAVLDSSLSE 291 (344)
T ss_dssp SSSCCEEE--EETTSCEEEECTTCCE
T ss_pred CCCeEEEE--EeCCCeEEEEECCCCc
Confidence 985 5666 7899999999998765
No 16
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=1.9e-34 Score=272.08 Aligned_cols=237 Identities=20% Similarity=0.355 Sum_probs=200.2
Q ss_pred cceeEeecCC-CcEEEEE-cCCeEEEEECCCC--CeEEeEecCCCCCeEEEEEcC--CCCeEEEEECCCcEEEEECCCCe
Q 014934 168 FYLNLVDWSS-HNVLAVG-LGNCVYLWNACSS--KVTKLCDLGIDDSVCSVGWAN--RNTHLAVGTSHGKVQIWDASRCK 241 (415)
Q Consensus 168 ~~i~~l~ws~-~~~la~~-~d~~V~iwd~~~~--~~~~~~~~~~~~~V~~v~~sp--~g~~la~g~~dg~V~iwd~~~~~ 241 (415)
-.|++++|++ +++||++ .|+.|+||++.++ +....+. +|.+.|.+++|++ +|++||+|+.||+|+|||+.+++
T Consensus 10 ~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~~~~~~l~-gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iWd~~~~~ 88 (297)
T 2pm7_B 10 EMIHDAVMDYYGKRMATCSSDKTIKIFEVEGETHKLIDTLT-GHEGPVWRVDWAHPKFGTILASCSYDGKVMIWKEENGR 88 (297)
T ss_dssp SCEEEEEECTTSSEEEEEETTSCEEEEEBCSSCBCCCEEEC-CCSSCEEEEEECCGGGCSEEEEEETTTEEEEEEBSSSC
T ss_pred CceEEEEECCCCCEEEEEeCCCEEEEEecCCCCcEEEEEEc-cccCCeEEEEecCCCcCCEEEEEcCCCEEEEEEcCCCc
Confidence 3689999999 7777776 5899999998754 4444444 8999999999986 48999999999999999998764
Q ss_pred --eeEEecCCCccEEEEEeeC----CEEEEEeCCCcEEEEECCCCCc-cEEEeccccCCeEEEEEeCC------------
Q 014934 242 --RVRTMEGHRLRVGALAWSS----SLLSSGSRDKSILQRDIRAQED-FVSKLSGHKSEVCGLKWSYD------------ 302 (415)
Q Consensus 242 --~~~~l~~h~~~V~~l~~~~----~~l~sgs~dg~I~iwd~~~~~~-~~~~~~~h~~~V~~l~~spd------------ 302 (415)
.+..+.+|...|.+++|++ .+|++|+.|+.|++||++.... ....+.+|...|.+++|+|+
T Consensus 89 ~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~ 168 (297)
T 2pm7_B 89 WSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTK 168 (297)
T ss_dssp BCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEECCSSCEEEEEECCCC-----------
T ss_pred eEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeeecccCccceEeecCCcccccccCCCCC
Confidence 5677888999999999984 5899999999999999987642 24567899999999999997
Q ss_pred -CCEEEEEeCCCcEEEEECCCCc----eeEEeccCCCcEEEEEEcCCC--CcEEEEEcCCCCCeEEEEECCCCc---EEE
Q 014934 303 -NRELASGGNDNRLFVWNQHSTQ----PVLKYCEHTAAVKAIAWSPHL--HGLLASGGGTADRCIRFWNTTTNT---HLS 372 (415)
Q Consensus 303 -g~~lasg~~dg~I~iwd~~~~~----~~~~~~~h~~~V~~l~~sp~~--~~llasggg~~d~~I~iwd~~t~~---~~~ 372 (415)
+++||+|+.|+.|+|||+++++ .+..+.+|...|.+++|+|++ ..+|++++ .|+.|++||+.++. ...
T Consensus 169 ~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s--~D~~v~iWd~~~~~~~~~~~ 246 (297)
T 2pm7_B 169 ESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVS--QDRTCIIWTQDNEQGPWKKT 246 (297)
T ss_dssp -CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEE--TTSCEEEEEESSTTSCCEEE
T ss_pred CcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCCceEEEEEE--CCCcEEEEEeCCCCCcccee
Confidence 5799999999999999998765 566788999999999999986 45888887 89999999998753 122
Q ss_pred Ee---eCCCCEEEEEECCCCCeEEEEEecCCCcEEEEECC
Q 014934 373 CM---DTGSQVCNLVWSKNVNELVSTHGYSQNQIIVWRYP 409 (415)
Q Consensus 373 ~~---~~~~~V~~l~~s~~~~~l~s~~g~~dg~I~vw~~~ 409 (415)
.+ .+...|.+++|+|+++.|++ ++.|+.|+||+..
T Consensus 247 ~~~~~~~~~~v~~~~~s~~g~~las--~~~D~~v~lw~~~ 284 (297)
T 2pm7_B 247 LLKEEKFPDVLWRASWSLSGNVLAL--SGGDNKVTLWKEN 284 (297)
T ss_dssp ESSSSCCSSCEEEEEECSSSCCEEE--EETTSCEEEEEEC
T ss_pred eeecccCCCcEEEEEECCCCCEEEE--EcCCCcEEEEEEC
Confidence 22 24678999999999999998 7789999999986
No 17
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=3.4e-34 Score=273.26 Aligned_cols=236 Identities=21% Similarity=0.327 Sum_probs=208.0
Q ss_pred CcceeEeecCC-C-cEEEEE-cCCeEEEEECCCCC-----eEEeEecCCCCCeEEEEEcCCCCeEEEEECCCcEEEEECC
Q 014934 167 DFYLNLVDWSS-H-NVLAVG-LGNCVYLWNACSSK-----VTKLCDLGIDDSVCSVGWANRNTHLAVGTSHGKVQIWDAS 238 (415)
Q Consensus 167 ~~~i~~l~ws~-~-~~la~~-~d~~V~iwd~~~~~-----~~~~~~~~~~~~V~~v~~sp~g~~la~g~~dg~V~iwd~~ 238 (415)
.-.|++++|++ + ++|+++ .|+.|++|++.+.. ....+. +|...|.+++|+|+|++|++|+.||+|+|||+.
T Consensus 17 ~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~-~h~~~v~~~~~s~dg~~l~s~s~D~~v~~wd~~ 95 (319)
T 3frx_A 17 NGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFK-GHSHIVQDCTLTADGAYALSASWDKTLRLWDVA 95 (319)
T ss_dssp SSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEE-CCSSCEEEEEECTTSSEEEEEETTSEEEEEETT
T ss_pred cceEEEEEccCCCccEEEEecCCccEEEecCCCCCccccccceEEe-CCcccEEEEEECCCCCEEEEEeCCCEEEEEECC
Confidence 34689999998 3 566665 68999999986432 233343 899999999999999999999999999999999
Q ss_pred CCeeeEEecCCCccEEEEEee--CCEEEEEeCCCcEEEEECCCCCccEEEeccccCCeEEEEEeCC------CCEEEEEe
Q 014934 239 RCKRVRTMEGHRLRVGALAWS--SSLLSSGSRDKSILQRDIRAQEDFVSKLSGHKSEVCGLKWSYD------NRELASGG 310 (415)
Q Consensus 239 ~~~~~~~l~~h~~~V~~l~~~--~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~spd------g~~lasg~ 310 (415)
+++.+..+.+|...|.+++|+ +.+|++|+.|++|++||++.. .+..+.+|...|.+++|+|. +.+|++|+
T Consensus 96 ~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~~~--~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~ 173 (319)
T 3frx_A 96 TGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIKGQ--CLATLLGHNDWVSQVRVVPNEKADDDSVTIISAG 173 (319)
T ss_dssp TTEEEEEEECCSSCEEEEEECTTSCEEEEEETTSCEEEEETTSC--EEEEECCCSSCEEEEEECCC------CCEEEEEE
T ss_pred CCCeeEEEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCC--eEEEEeccCCcEEEEEEccCCCCCCCccEEEEEe
Confidence 999999999999999999998 479999999999999999754 47788899999999999984 45899999
Q ss_pred CCCcEEEEECCCCceeEEeccCCCcEEEEEEcCCCCcEEEEEcCCCCCeEEEEECCCCcEEEEeeCCCCEEEEEECCCCC
Q 014934 311 NDNRLFVWNQHSTQPVLKYCEHTAAVKAIAWSPHLHGLLASGGGTADRCIRFWNTTTNTHLSCMDTGSQVCNLVWSKNVN 390 (415)
Q Consensus 311 ~dg~I~iwd~~~~~~~~~~~~h~~~V~~l~~sp~~~~llasggg~~d~~I~iwd~~t~~~~~~~~~~~~V~~l~~s~~~~ 390 (415)
.|+.|++||+++.+....+.+|...|.+++|+|++. +|++++ .|+.|++||+.+++.+..+.....|.+++|+|++.
T Consensus 174 ~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~sp~g~-~l~s~~--~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~sp~~~ 250 (319)
T 3frx_A 174 NDKMVKAWNLNQFQIEADFIGHNSNINTLTASPDGT-LIASAG--KDGEIMLWNLAAKKAMYTLSAQDEVFSLAFSPNRY 250 (319)
T ss_dssp TTSCEEEEETTTTEEEEEECCCCSCEEEEEECTTSS-EEEEEE--TTCEEEEEETTTTEEEEEEECCSCEEEEEECSSSS
T ss_pred CCCEEEEEECCcchhheeecCCCCcEEEEEEcCCCC-EEEEEe--CCCeEEEEECCCCcEEEEecCCCcEEEEEEcCCCC
Confidence 999999999999999999999999999999999987 777776 89999999999999999998888999999999999
Q ss_pred eEEEEEecCCCcEEEEECCCC
Q 014934 391 ELVSTHGYSQNQIIVWRYPTM 411 (415)
Q Consensus 391 ~l~s~~g~~dg~I~vw~~~s~ 411 (415)
.|++ +. ++.+++|++...
T Consensus 251 ~la~--~~-~~~i~v~~~~~~ 268 (319)
T 3frx_A 251 WLAA--AT-ATGIKVFSLDPQ 268 (319)
T ss_dssp EEEE--EE-TTEEEEEEETTE
T ss_pred EEEE--Ec-CCCcEEEEeCcC
Confidence 9988 43 456999998753
No 18
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=5.1e-34 Score=279.96 Aligned_cols=239 Identities=22% Similarity=0.424 Sum_probs=206.5
Q ss_pred CCcceeEeecCC-CcEEEEE-cCCeEEEEECCCCCeEEeEecCCCCCeEEEEEcCCCCeEEEEECCCcEEEEECCCCeee
Q 014934 166 DDFYLNLVDWSS-HNVLAVG-LGNCVYLWNACSSKVTKLCDLGIDDSVCSVGWANRNTHLAVGTSHGKVQIWDASRCKRV 243 (415)
Q Consensus 166 ~~~~i~~l~ws~-~~~la~~-~d~~V~iwd~~~~~~~~~~~~~~~~~V~~v~~sp~g~~la~g~~dg~V~iwd~~~~~~~ 243 (415)
.+.+|++++|+| +++|+++ .|+.|++||+.+++....+. +|...|.+++|+|++++|++|+.||.|++||+.+++..
T Consensus 122 ~~~~v~~v~~s~dg~~l~s~~~d~~i~iwd~~~~~~~~~~~-~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~ 200 (393)
T 1erj_A 122 SDLYIRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQ-GHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCS 200 (393)
T ss_dssp CCCBEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEEC-CCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEE
T ss_pred CceeEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEc-cCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCeeE
Confidence 455799999999 6777776 58999999999998877775 89999999999999999999999999999999999888
Q ss_pred EEecCCCccEEEEEee---CCEEEEEeCCCcEEEEECCCCCccEEEe-------ccccCCeEEEEEeCCCCEEEEEeCCC
Q 014934 244 RTMEGHRLRVGALAWS---SSLLSSGSRDKSILQRDIRAQEDFVSKL-------SGHKSEVCGLKWSYDNRELASGGNDN 313 (415)
Q Consensus 244 ~~l~~h~~~V~~l~~~---~~~l~sgs~dg~I~iwd~~~~~~~~~~~-------~~h~~~V~~l~~spdg~~lasg~~dg 313 (415)
..+. +...+.+++|+ +.+|++|+.||.|++||++++. .+..+ .+|...|.+++|+|++++|++|+.|+
T Consensus 201 ~~~~-~~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~-~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~ 278 (393)
T 1erj_A 201 LTLS-IEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGF-LVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDR 278 (393)
T ss_dssp EEEE-CSSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCC-EEEEEC------CCCSSCEEEEEECTTSSEEEEEETTS
T ss_pred EEEE-cCCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCCc-EEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCC
Confidence 7776 56779999997 4799999999999999999876 34444 57999999999999999999999999
Q ss_pred cEEEEECCCC------------ceeEEeccCCCcEEEEEEcCCCCcEEEEEcCCCCCeEEEEECCCCcEEEEee-CCCCE
Q 014934 314 RLFVWNQHST------------QPVLKYCEHTAAVKAIAWSPHLHGLLASGGGTADRCIRFWNTTTNTHLSCMD-TGSQV 380 (415)
Q Consensus 314 ~I~iwd~~~~------------~~~~~~~~h~~~V~~l~~sp~~~~llasggg~~d~~I~iwd~~t~~~~~~~~-~~~~V 380 (415)
.|++||+++. .+...+.+|...|.+++|+|++. +|++++ .|+.|++||+.+++.+..+. |...|
T Consensus 279 ~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-~l~sgs--~D~~v~iwd~~~~~~~~~l~~h~~~v 355 (393)
T 1erj_A 279 SVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDE-YILSGS--KDRGVLFWDKKSGNPLLMLQGHRNSV 355 (393)
T ss_dssp EEEEEEC---------------CEEEEEECCSSCEEEEEECGGGC-EEEEEE--TTSEEEEEETTTCCEEEEEECCSSCE
T ss_pred EEEEEECCCCCCcccccCCCCCcceEEEecccCcEEEEEECCCCC-EEEEEe--CCCeEEEEECCCCeEEEEECCCCCCE
Confidence 9999999753 34567789999999999999987 667776 89999999999999988886 67889
Q ss_pred EEEEECC------CCCeEEEEEecCCCcEEEEECCCCc
Q 014934 381 CNLVWSK------NVNELVSTHGYSQNQIIVWRYPTMS 412 (415)
Q Consensus 381 ~~l~~s~------~~~~l~s~~g~~dg~I~vw~~~s~~ 412 (415)
.+++|++ +++.|++ |+.|+.|+||++....
T Consensus 356 ~~v~~~~~~~~~p~~~~l~s--gs~Dg~i~iW~~~~~~ 391 (393)
T 1erj_A 356 ISVAVANGSSLGPEYNVFAT--GSGDCKARIWKYKKIA 391 (393)
T ss_dssp EEEEECSSCTTCTTCEEEEE--EETTSEEEEEEEEEC-
T ss_pred EEEEecCCcCcCCCCCEEEE--ECCCCcEEECcccccC
Confidence 9999986 6778888 7899999999987653
No 19
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=7.7e-34 Score=270.84 Aligned_cols=234 Identities=19% Similarity=0.342 Sum_probs=206.1
Q ss_pred cceeEeecCC-CcEEEEE-cCCeEEEEECCCCCeEEeEecCCCCCeEEEEEcCCCCeEEEEECCCcEEEEECCCCeeeEE
Q 014934 168 FYLNLVDWSS-HNVLAVG-LGNCVYLWNACSSKVTKLCDLGIDDSVCSVGWANRNTHLAVGTSHGKVQIWDASRCKRVRT 245 (415)
Q Consensus 168 ~~i~~l~ws~-~~~la~~-~d~~V~iwd~~~~~~~~~~~~~~~~~V~~v~~sp~g~~la~g~~dg~V~iwd~~~~~~~~~ 245 (415)
..|++++|++ +.+|+++ .|+.|++||+.+++....+. +|...|.+++|+|++.+|++|+.||.|++||+. ++++..
T Consensus 66 ~~v~~~~~s~dg~~l~s~s~D~~v~~wd~~~~~~~~~~~-~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~-~~~~~~ 143 (319)
T 3frx_A 66 HIVQDCTLTADGAYALSASWDKTLRLWDVATGETYQRFV-GHKSDVMSVDIDKKASMIISGSRDKTIKVWTIK-GQCLAT 143 (319)
T ss_dssp SCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE-CCSSCEEEEEECTTSCEEEEEETTSCEEEEETT-SCEEEE
T ss_pred ccEEEEEECCCCCEEEEEeCCCEEEEEECCCCCeeEEEc-cCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECC-CCeEEE
Confidence 4689999999 6666665 68999999999999877776 899999999999999999999999999999996 567788
Q ss_pred ecCCCccEEEEEeeC--------CEEEEEeCCCcEEEEECCCCCccEEEeccccCCeEEEEEeCCCCEEEEEeCCCcEEE
Q 014934 246 MEGHRLRVGALAWSS--------SLLSSGSRDKSILQRDIRAQEDFVSKLSGHKSEVCGLKWSYDNRELASGGNDNRLFV 317 (415)
Q Consensus 246 l~~h~~~V~~l~~~~--------~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~spdg~~lasg~~dg~I~i 317 (415)
+.+|...|.++.|.+ ..|++|+.|+.|++||++... ....+.+|...|.+++|+|++++||+|+.||.|+|
T Consensus 144 ~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~-~~~~~~~h~~~v~~~~~sp~g~~l~s~~~dg~i~i 222 (319)
T 3frx_A 144 LLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQ-IEADFIGHNSNINTLTASPDGTLIASAGKDGEIML 222 (319)
T ss_dssp ECCCSSCEEEEEECCC------CCEEEEEETTSCEEEEETTTTE-EEEEECCCCSCEEEEEECTTSSEEEEEETTCEEEE
T ss_pred EeccCCcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcch-hheeecCCCCcEEEEEEcCCCCEEEEEeCCCeEEE
Confidence 899999999999974 279999999999999999876 56778899999999999999999999999999999
Q ss_pred EECCCCceeEEeccCCCcEEEEEEcCCCCcEEEEEcCCCCCeEEEEECCCCcEEEEee---------CCCCEEEEEECCC
Q 014934 318 WNQHSTQPVLKYCEHTAAVKAIAWSPHLHGLLASGGGTADRCIRFWNTTTNTHLSCMD---------TGSQVCNLVWSKN 388 (415)
Q Consensus 318 wd~~~~~~~~~~~~h~~~V~~l~~sp~~~~llasggg~~d~~I~iwd~~t~~~~~~~~---------~~~~V~~l~~s~~ 388 (415)
||+.+++.+..+.. ...|.+++|+|++. +++++. +..|++|++..+..+..+. +...+.+++|+|+
T Consensus 223 wd~~~~~~~~~~~~-~~~v~~~~~sp~~~-~la~~~---~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spd 297 (319)
T 3frx_A 223 WNLAAKKAMYTLSA-QDEVFSLAFSPNRY-WLAAAT---ATGIKVFSLDPQYLVDDLRPEFAGYSKAAEPHAVSLAWSAD 297 (319)
T ss_dssp EETTTTEEEEEEEC-CSCEEEEEECSSSS-EEEEEE---TTEEEEEEETTEEEEEEECCCCTTCCGGGCCCEEEEEECTT
T ss_pred EECCCCcEEEEecC-CCcEEEEEEcCCCC-EEEEEc---CCCcEEEEeCcCeeeeccCccccccccCcCcceeEEEECCC
Confidence 99999999988865 46899999999987 666654 5679999999887776664 2456899999999
Q ss_pred CCeEEEEEecCCCcEEEEECCCC
Q 014934 389 VNELVSTHGYSQNQIIVWRYPTM 411 (415)
Q Consensus 389 ~~~l~s~~g~~dg~I~vw~~~s~ 411 (415)
|++|++ |+.||.|+||++.+.
T Consensus 298 g~~l~s--g~~Dg~i~vWd~~t~ 318 (319)
T 3frx_A 298 GQTLFA--GYTDNVIRVWQVMTA 318 (319)
T ss_dssp SSEEEE--EETTSCEEEEEEEEC
T ss_pred CCEEEE--eecCceEEEEEEeec
Confidence 999999 789999999998764
No 20
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=9.6e-34 Score=268.21 Aligned_cols=236 Identities=17% Similarity=0.253 Sum_probs=206.7
Q ss_pred cceeEeecCC-CcEEEEE-cCCeEEEEECCCCCeEEeEecCCCCCeEEEEEcCCCCeEEEEECCCcEEEEECCCC-eeeE
Q 014934 168 FYLNLVDWSS-HNVLAVG-LGNCVYLWNACSSKVTKLCDLGIDDSVCSVGWANRNTHLAVGTSHGKVQIWDASRC-KRVR 244 (415)
Q Consensus 168 ~~i~~l~ws~-~~~la~~-~d~~V~iwd~~~~~~~~~~~~~~~~~V~~v~~sp~g~~la~g~~dg~V~iwd~~~~-~~~~ 244 (415)
..+.++.|++ +++|+++ .|+.|++||+.+++....+. +|.+.|++++|+|++++|++|+.||+|++||+.++ ....
T Consensus 56 ~~v~~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~-~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~ 134 (304)
T 2ynn_A 56 TPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFE-AHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQ 134 (304)
T ss_dssp SCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEEE-CCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEE
T ss_pred CcEEEEEEeCCCCEEEEECCCCEEEEEECCCCcEEEEEe-CCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhh
Confidence 3588999999 6666666 68999999999999887776 89999999999999999999999999999999877 5667
Q ss_pred EecCCCccEEEEEeeC---CEEEEEeCCCcEEEEECCCCCccEEEeccccCCeEEEEEeC--CCCEEEEEeCCCcEEEEE
Q 014934 245 TMEGHRLRVGALAWSS---SLLSSGSRDKSILQRDIRAQEDFVSKLSGHKSEVCGLKWSY--DNRELASGGNDNRLFVWN 319 (415)
Q Consensus 245 ~l~~h~~~V~~l~~~~---~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~sp--dg~~lasg~~dg~I~iwd 319 (415)
.+.+|...|.+++|++ ..|++|+.|++|++||++..........+|...|..+.|+| ++.+|++|+.|+.|+|||
T Consensus 135 ~~~~h~~~v~~v~~~p~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd 214 (304)
T 2ynn_A 135 TFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWD 214 (304)
T ss_dssp EECCCCSCEEEEEECTTCTTEEEEEETTSEEEEEETTCSSCSEEEECCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEE
T ss_pred hhcccCCcEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCccceeccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEe
Confidence 7899999999999984 58999999999999999887755555567778899999987 778999999999999999
Q ss_pred CCCCceeEEeccCCCcEEEEEEcCCCCcEEEEEcCCCCCeEEEEECCCCcEEEEee-CCCCEEEEEECCCCCe--EEEEE
Q 014934 320 QHSTQPVLKYCEHTAAVKAIAWSPHLHGLLASGGGTADRCIRFWNTTTNTHLSCMD-TGSQVCNLVWSKNVNE--LVSTH 396 (415)
Q Consensus 320 ~~~~~~~~~~~~h~~~V~~l~~sp~~~~llasggg~~d~~I~iwd~~t~~~~~~~~-~~~~V~~l~~s~~~~~--l~s~~ 396 (415)
+++++++..+.+|...|.+++|+|++. +|++++ .|+.|++||+.+++++..+. +...+.+++|+|++.. +++
T Consensus 215 ~~~~~~~~~~~~h~~~v~~~~~~p~~~-~l~s~s--~Dg~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~as-- 289 (304)
T 2ynn_A 215 YQTKSCVATLEGHMSNVSFAVFHPTLP-IIISGS--EDGTLKIWNSSTYKVEKTLNVGLERSWCIATHPTGRKNYIAS-- 289 (304)
T ss_dssp TTTTEEEEEEECCSSCEEEEEECSSSS-EEEEEE--TTSCEEEEETTTCCEEEEECCSSSSEEEEEECTTCGGGCEEE--
T ss_pred CCCCccceeeCCCCCCEEEEEECCCCC-EEEEEc--CCCeEEEEECCCCceeeeccCCCccEEEEEECCCCCceEEEE--
Confidence 999999999999999999999999987 777877 89999999999999999887 4578999999998863 555
Q ss_pred ecCCCcEEEEECCC
Q 014934 397 GYSQNQIIVWRYPT 410 (415)
Q Consensus 397 g~~dg~I~vw~~~s 410 (415)
|+ ++.+.+|++..
T Consensus 290 g~-~~g~~~~~~~~ 302 (304)
T 2ynn_A 290 GF-DNGFTVLSLGN 302 (304)
T ss_dssp EE-TTEEEEEECC-
T ss_pred ec-CCceEEEEecc
Confidence 54 55788888765
No 21
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=1.8e-33 Score=266.38 Aligned_cols=240 Identities=21% Similarity=0.363 Sum_probs=208.7
Q ss_pred CcceeEeecCC-CcEEEEE-cCCeEEEEECCCCCeEEeEecCCCCCeEEEEEcCCCCeEEEEECCCcEEEEECCCCeeeE
Q 014934 167 DFYLNLVDWSS-HNVLAVG-LGNCVYLWNACSSKVTKLCDLGIDDSVCSVGWANRNTHLAVGTSHGKVQIWDASRCKRVR 244 (415)
Q Consensus 167 ~~~i~~l~ws~-~~~la~~-~d~~V~iwd~~~~~~~~~~~~~~~~~V~~v~~sp~g~~la~g~~dg~V~iwd~~~~~~~~ 244 (415)
...|++++|+| +++|+++ .|+.|++|+..+++....+. +|...|.+++|+|++++|++|+.||.|++||+.+++.+.
T Consensus 23 ~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~ 101 (312)
T 4ery_A 23 TKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTIS-GHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLK 101 (312)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEEC-CCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEE
T ss_pred CCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcccchhhc-cCCCceEEEEEcCCCCEEEEECCCCEEEEEECCCCcEEE
Confidence 34699999999 6777666 68999999999998877775 888999999999999999999999999999999999999
Q ss_pred EecCCCccEEEEEee--CCEEEEEeCCCcEEEEECCCCCccEEEeccccCCeEEEEEeCCCCEEEEEeCCCcEEEEECCC
Q 014934 245 TMEGHRLRVGALAWS--SSLLSSGSRDKSILQRDIRAQEDFVSKLSGHKSEVCGLKWSYDNRELASGGNDNRLFVWNQHS 322 (415)
Q Consensus 245 ~l~~h~~~V~~l~~~--~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~spdg~~lasg~~dg~I~iwd~~~ 322 (415)
.+.+|...|.+++|+ +.+|++|+.|+.|++||++++. .+..+..|...|.+++|+|++++|++|+.|+.|++||+++
T Consensus 102 ~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~-~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~ 180 (312)
T 4ery_A 102 TLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGK-CLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTAS 180 (312)
T ss_dssp EEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCC-EEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTT
T ss_pred EEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCE-EEEEecCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCC
Confidence 999999999999998 4799999999999999999886 5778889999999999999999999999999999999999
Q ss_pred CceeEEec-cCCCcEEEEEEcCCCCcEEEEEcCCCCCeEEEEECCCCcEEEEeeCC-CC---EEEEEECCCCCeEEEEEe
Q 014934 323 TQPVLKYC-EHTAAVKAIAWSPHLHGLLASGGGTADRCIRFWNTTTNTHLSCMDTG-SQ---VCNLVWSKNVNELVSTHG 397 (415)
Q Consensus 323 ~~~~~~~~-~h~~~V~~l~~sp~~~~llasggg~~d~~I~iwd~~t~~~~~~~~~~-~~---V~~l~~s~~~~~l~s~~g 397 (415)
++.+..+. .+...+..++|+|+++ +|++++ .|+.|++||+.+++.+..+... .. +......+++.+|++ |
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~--~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s--g 255 (312)
T 4ery_A 181 GQCLKTLIDDDNPPVSFVKFSPNGK-YILAAT--LDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVS--G 255 (312)
T ss_dssp CCEEEEECCSSCCCEEEEEECTTSS-EEEEEE--TTTEEEEEETTTTEEEEEECSSCCSSSCCCEEEECSSSCEEEE--C
T ss_pred CceeeEEeccCCCceEEEEECCCCC-EEEEEc--CCCeEEEEECCCCcEEEEEEecCCceEEEEEEEEeCCCcEEEE--E
Confidence 98887764 5667899999999998 555555 7999999999999988887532 22 233334467788888 8
Q ss_pred cCCCcEEEEECCCCcc
Q 014934 398 YSQNQIIVWRYPTMSK 413 (415)
Q Consensus 398 ~~dg~I~vw~~~s~~~ 413 (415)
+.||.|++||+.+.+.
T Consensus 256 ~~dg~i~vwd~~~~~~ 271 (312)
T 4ery_A 256 SEDNLVYIWNLQTKEI 271 (312)
T ss_dssp CTTSCEEEEETTTCCE
T ss_pred CCCCEEEEEECCCchh
Confidence 8999999999987654
No 22
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=9.2e-34 Score=278.16 Aligned_cols=241 Identities=21% Similarity=0.317 Sum_probs=205.6
Q ss_pred CcceeEeecCC-CcEEEEEcCCeEEEEECCCCCeEEeEecC-----------------CCCCeEEEEEcCCCCeEEEEEC
Q 014934 167 DFYLNLVDWSS-HNVLAVGLGNCVYLWNACSSKVTKLCDLG-----------------IDDSVCSVGWANRNTHLAVGTS 228 (415)
Q Consensus 167 ~~~i~~l~ws~-~~~la~~~d~~V~iwd~~~~~~~~~~~~~-----------------~~~~V~~v~~sp~g~~la~g~~ 228 (415)
.-.|++++|+| +.+||++.++.+++|++.+++....+... +...|++++|+|+|++||+|+.
T Consensus 64 ~~~V~~v~fspdg~~la~g~~~~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~s~~~ 143 (393)
T 1erj_A 64 TSVVCCVKFSNDGEYLATGCNKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLATGAE 143 (393)
T ss_dssp SSCCCEEEECTTSSEEEEECBSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTTSSEEEEEET
T ss_pred CCEEEEEEECCCCCEEEEEcCCcEEEEEecCCCEEEEecCccccccccccccccccCCCceeEEEEEECCCCCEEEEEcC
Confidence 34689999999 88999999999999999999877665311 1224999999999999999999
Q ss_pred CCcEEEEECCCCeeeEEecCCCccEEEEEee--CCEEEEEeCCCcEEEEECCCCCccEEEeccccCCeEEEEEeC-CCCE
Q 014934 229 HGKVQIWDASRCKRVRTMEGHRLRVGALAWS--SSLLSSGSRDKSILQRDIRAQEDFVSKLSGHKSEVCGLKWSY-DNRE 305 (415)
Q Consensus 229 dg~V~iwd~~~~~~~~~l~~h~~~V~~l~~~--~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~sp-dg~~ 305 (415)
||.|+|||+.+++.+..+.+|...|.+++|+ +.+|++|+.|++|++||++++. ....+. +...+.+++|+| ++++
T Consensus 144 d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~-~~~~~~-~~~~v~~~~~~~~~~~~ 221 (393)
T 1erj_A 144 DRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQ-CSLTLS-IEDGVTTVAVSPGDGKY 221 (393)
T ss_dssp TSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTE-EEEEEE-CSSCEEEEEECSTTCCE
T ss_pred CCeEEEEECCCCcEEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCe-eEEEEE-cCCCcEEEEEECCCCCE
Confidence 9999999999999999999999999999998 5799999999999999999876 344443 567899999999 8999
Q ss_pred EEEEeCCCcEEEEECCCCceeEEe-------ccCCCcEEEEEEcCCCCcEEEEEcCCCCCeEEEEECCCCc---------
Q 014934 306 LASGGNDNRLFVWNQHSTQPVLKY-------CEHTAAVKAIAWSPHLHGLLASGGGTADRCIRFWNTTTNT--------- 369 (415)
Q Consensus 306 lasg~~dg~I~iwd~~~~~~~~~~-------~~h~~~V~~l~~sp~~~~llasggg~~d~~I~iwd~~t~~--------- 369 (415)
|++|+.|+.|++||+++++.+..+ .+|...|.+++|+|++. +|++++ .|+.|++||+.+..
T Consensus 222 l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~-~l~s~s--~d~~v~~wd~~~~~~~~~~~~~~ 298 (393)
T 1erj_A 222 IAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQ-SVVSGS--LDRSVKLWNLQNANNKSDSKTPN 298 (393)
T ss_dssp EEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSS-EEEEEE--TTSEEEEEEC-------------
T ss_pred EEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCC-EEEEEe--CCCEEEEEECCCCCCcccccCCC
Confidence 999999999999999999887776 57999999999999997 667776 89999999997643
Q ss_pred ---EEEEe-eCCCCEEEEEECCCCCeEEEEEecCCCcEEEEECCCCccc
Q 014934 370 ---HLSCM-DTGSQVCNLVWSKNVNELVSTHGYSQNQIIVWRYPTMSKV 414 (415)
Q Consensus 370 ---~~~~~-~~~~~V~~l~~s~~~~~l~s~~g~~dg~I~vw~~~s~~~l 414 (415)
+...+ .|...|.+++|++++.+|++ |+.|+.|++||..+++.+
T Consensus 299 ~~~~~~~~~~h~~~v~~~~~~~~~~~l~s--gs~D~~v~iwd~~~~~~~ 345 (393)
T 1erj_A 299 SGTCEVTYIGHKDFVLSVATTQNDEYILS--GSKDRGVLFWDKKSGNPL 345 (393)
T ss_dssp --CEEEEEECCSSCEEEEEECGGGCEEEE--EETTSEEEEEETTTCCEE
T ss_pred CCcceEEEecccCcEEEEEECCCCCEEEE--EeCCCeEEEEECCCCeEE
Confidence 33333 36678999999999999998 789999999999887643
No 23
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=7e-34 Score=294.92 Aligned_cols=236 Identities=21% Similarity=0.294 Sum_probs=203.2
Q ss_pred eeEeecCC-CcEEEEEcCCeEEEEECCCCCeEEeEecCCCCCeEEEEEcCCCCeEEEEECCCcEEEEECCCCe--eeEE-
Q 014934 170 LNLVDWSS-HNVLAVGLGNCVYLWNACSSKVTKLCDLGIDDSVCSVGWANRNTHLAVGTSHGKVQIWDASRCK--RVRT- 245 (415)
Q Consensus 170 i~~l~ws~-~~~la~~~d~~V~iwd~~~~~~~~~~~~~~~~~V~~v~~sp~g~~la~g~~dg~V~iwd~~~~~--~~~~- 245 (415)
..+++|+| ++.|+++.++.|++|++.+++....+. +|...|++++|+|+|++||+|+.||+|+|||+.+++ ....
T Consensus 21 ~~~~~~spdg~~l~~~~~~~v~l~~~~~~~~~~~~~-~h~~~v~~~~~spdg~~lasg~~d~~v~lWd~~~~~~~~~~~~ 99 (611)
T 1nr0_A 21 AVVLGNTPAGDKIQYCNGTSVYTVPVGSLTDTEIYT-EHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTHILKTTI 99 (611)
T ss_dssp CCCCEECTTSSEEEEEETTEEEEEETTCSSCCEEEC-CCSSCEEEEEECTTSSEEEEEETTSEEEEEESSSTTCCEEEEE
T ss_pred eeEEeeCCCCCEEEeCCCCEEEEecCCCcccCeEec-CCCCceEEEEECCCCcEEEEEeCCCCEEEeECCCCcceeeEee
Confidence 45788999 789999989999999999888777775 899999999999999999999999999999985422 1112
Q ss_pred -------------------------------------------ecCCCccEEEEEeeC---CEEEEEeCCCcEEEEECCC
Q 014934 246 -------------------------------------------MEGHRLRVGALAWSS---SLLSSGSRDKSILQRDIRA 279 (415)
Q Consensus 246 -------------------------------------------l~~h~~~V~~l~~~~---~~l~sgs~dg~I~iwd~~~ 279 (415)
+.+|...|.+++|++ ..|++|+.|++|++||...
T Consensus 100 ~~~~~~v~~v~fs~dg~~l~~~~~~~~~~~~v~~wd~~~~~~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~ 179 (611)
T 1nr0_A 100 PVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFDTGTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPP 179 (611)
T ss_dssp ECSSSCEEEEEECTTSCEEEEEECCSSCSEEEEETTTCCBCBCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTT
T ss_pred cccCCceEEEEECCCCCEEEEEECCCCceeEEEEeeCCCCcceecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCC
Confidence 235667777888874 2699999999999999887
Q ss_pred CCccEEEeccccCCeEEEEEeCCCCEEEEEeCCCcEEEEECCCCceeEEec-------cCCCcEEEEEEcCCCCcEEEEE
Q 014934 280 QEDFVSKLSGHKSEVCGLKWSYDNRELASGGNDNRLFVWNQHSTQPVLKYC-------EHTAAVKAIAWSPHLHGLLASG 352 (415)
Q Consensus 280 ~~~~~~~~~~h~~~V~~l~~spdg~~lasg~~dg~I~iwd~~~~~~~~~~~-------~h~~~V~~l~~sp~~~~llasg 352 (415)
.. ....+.+|...|.+++|+|+|++||+|+.|+.|+|||+.+++.+..+. +|.+.|.+++|+|++. +|+++
T Consensus 180 ~~-~~~~l~~H~~~V~~v~fspdg~~las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~-~l~s~ 257 (611)
T 1nr0_A 180 FK-FKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGT-KIASA 257 (611)
T ss_dssp BE-EEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSS-EEEEE
T ss_pred Ce-EeeeeccccCceEEEEECCCCCEEEEEECCCcEEEEECCCCcEeeeeccccccccccCCCEEEEEECCCCC-EEEEE
Confidence 65 577889999999999999999999999999999999999999888884 7999999999999987 67777
Q ss_pred cCCCCCeEEEEECCCCcEEEEe--------------------------------------------eCCCCEEEEEECCC
Q 014934 353 GGTADRCIRFWNTTTNTHLSCM--------------------------------------------DTGSQVCNLVWSKN 388 (415)
Q Consensus 353 gg~~d~~I~iwd~~t~~~~~~~--------------------------------------------~~~~~V~~l~~s~~ 388 (415)
+ .|++|++||+.+++++..+ .|...|.+++|+|+
T Consensus 258 s--~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spd 335 (611)
T 1nr0_A 258 S--ADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSAD 335 (611)
T ss_dssp E--TTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTT
T ss_pred e--CCCeEEEEeCCCCceeeeecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCC
Confidence 6 8999999999988765543 24567999999999
Q ss_pred CCeEEEEEecCCCcEEEEECCCCc
Q 014934 389 VNELVSTHGYSQNQIIVWRYPTMS 412 (415)
Q Consensus 389 ~~~l~s~~g~~dg~I~vw~~~s~~ 412 (415)
+++|++ ++.|+.|++||+.+.+
T Consensus 336 g~~l~s--~s~D~~v~~Wd~~~~~ 357 (611)
T 1nr0_A 336 GKTLFS--ADAEGHINSWDISTGI 357 (611)
T ss_dssp SSEEEE--EETTSCEEEEETTTCC
T ss_pred CCEEEE--EeCCCcEEEEECCCCc
Confidence 999999 7789999999998764
No 24
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=5.7e-34 Score=274.72 Aligned_cols=238 Identities=22% Similarity=0.389 Sum_probs=202.7
Q ss_pred ceeEeecCC-CcEEEEE-cCCeEEEEECCCCCeEEe--EecCCCCCeEEEEEcCCCCeEEEEECCCcEEEEECCCC--ee
Q 014934 169 YLNLVDWSS-HNVLAVG-LGNCVYLWNACSSKVTKL--CDLGIDDSVCSVGWANRNTHLAVGTSHGKVQIWDASRC--KR 242 (415)
Q Consensus 169 ~i~~l~ws~-~~~la~~-~d~~V~iwd~~~~~~~~~--~~~~~~~~V~~v~~sp~g~~la~g~~dg~V~iwd~~~~--~~ 242 (415)
.+.+++|+| +.+||++ .|+.|+||+..++..... ...+|...|.+++|+|+|++||+|+.||.|+|||+.++ +.
T Consensus 18 ~v~~l~~sp~g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D~~v~iw~~~~~~~~~ 97 (345)
T 3fm0_A 18 RCWFLAWNPAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDATTCIWKKNQDDFEC 97 (345)
T ss_dssp CEEEEEECTTSSCEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEETTSCEEEEEECCC-EEE
T ss_pred cEEEEEECCCCCEEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEECCCcEEEEEccCCCeEE
Confidence 588999999 6777766 689999999988764322 22378999999999999999999999999999998776 46
Q ss_pred eEEecCCCccEEEEEee--CCEEEEEeCCCcEEEEECCCCC--ccEEEeccccCCeEEEEEeCCCCEEEEEeCCCcEEEE
Q 014934 243 VRTMEGHRLRVGALAWS--SSLLSSGSRDKSILQRDIRAQE--DFVSKLSGHKSEVCGLKWSYDNRELASGGNDNRLFVW 318 (415)
Q Consensus 243 ~~~l~~h~~~V~~l~~~--~~~l~sgs~dg~I~iwd~~~~~--~~~~~~~~h~~~V~~l~~spdg~~lasg~~dg~I~iw 318 (415)
+..+.+|...|.+++|+ +++|++|+.|++|++||++... ..+..+.+|...|.+++|+|++++||+|+.|+.|++|
T Consensus 98 ~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~~w 177 (345)
T 3fm0_A 98 VTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELLASASYDDTVKLY 177 (345)
T ss_dssp EEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEEECCCCSCEEEEEECSSSSCEEEEETTSCEEEE
T ss_pred EEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEEecCcCCCeEEEEECCCCCEEEEEeCCCcEEEE
Confidence 78899999999999998 5799999999999999998764 2356778999999999999999999999999999999
Q ss_pred ECCCCc--eeEEeccCCCcEEEEEEcCCCCcEEEEEcCCCCCeEEEEECCCC---------------cEEEEee--CCCC
Q 014934 319 NQHSTQ--PVLKYCEHTAAVKAIAWSPHLHGLLASGGGTADRCIRFWNTTTN---------------THLSCMD--TGSQ 379 (415)
Q Consensus 319 d~~~~~--~~~~~~~h~~~V~~l~~sp~~~~llasggg~~d~~I~iwd~~t~---------------~~~~~~~--~~~~ 379 (415)
|.++++ +...+.+|...|.+++|+|++. +|++++ .|+.|++||.... +++..+. +...
T Consensus 178 ~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~-~l~s~s--~D~~v~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~ 254 (345)
T 3fm0_A 178 REEEDDWVCCATLEGHESTVWSLAFDPSGQ-RLASCS--DDRTVRIWRQYLPGNEQGVACSGSDPSWKCICTLSGFHSRT 254 (345)
T ss_dssp EEETTEEEEEEEECCCSSCEEEEEECTTSS-EEEEEE--TTSCEEEEEEECTTCTTCCCCC---CEEEEEEEECSSCSSC
T ss_pred EecCCCEEEEEEecCCCCceEEEEECCCCC-EEEEEe--CCCeEEEeccccCCCCccceeeccCCccceeEEecCCCCCc
Confidence 998775 4567889999999999999987 677776 8999999996322 2233332 5678
Q ss_pred EEEEEECCCCCeEEEEEecCCCcEEEEECCCC
Q 014934 380 VCNLVWSKNVNELVSTHGYSQNQIIVWRYPTM 411 (415)
Q Consensus 380 V~~l~~s~~~~~l~s~~g~~dg~I~vw~~~s~ 411 (415)
|.+++|++++..|++ ++.|+.|++|+....
T Consensus 255 v~~v~~~~~~~~l~s--~~~d~~i~vw~~~~~ 284 (345)
T 3fm0_A 255 IYDIAWCQLTGALAT--ACGDDAIRVFQEDPN 284 (345)
T ss_dssp EEEEEECTTTCCEEE--EETTSCEEEEEECTT
T ss_pred EEEEEEecCCCEEEE--EeCCCeEEEEEeCCC
Confidence 999999999999998 678999999998653
No 25
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6.9e-34 Score=272.46 Aligned_cols=238 Identities=23% Similarity=0.330 Sum_probs=194.4
Q ss_pred cceeEeecCCCcEEEEE-cCCeEEEEECCCCC--eEEeEecC-CCCCeEEEEEcCCCCeEEEEECCCcEEEEECCC----
Q 014934 168 FYLNLVDWSSHNVLAVG-LGNCVYLWNACSSK--VTKLCDLG-IDDSVCSVGWANRNTHLAVGTSHGKVQIWDASR---- 239 (415)
Q Consensus 168 ~~i~~l~ws~~~~la~~-~d~~V~iwd~~~~~--~~~~~~~~-~~~~V~~v~~sp~g~~la~g~~dg~V~iwd~~~---- 239 (415)
-.|.+++|+++ +|+++ .|+.|++|++.++. ....+..+ |...|.+++|+|++++||+|+.||.|+|||+..
T Consensus 15 ~~v~~~~~s~~-~las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~~v~iw~~~~~~~~ 93 (330)
T 2hes_X 15 EKIWSFDFSQG-ILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGSFDSTVSIWAKEESADR 93 (330)
T ss_dssp SCEEEEEEETT-EEEEEESSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSEEEEEETTSCEEEEEC------
T ss_pred CceeeeccCCC-EEEEEcCCCEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCEEEEEeCCCcEEEEEcccCcCc
Confidence 35889999988 55555 68999999998764 33334234 899999999999999999999999999999843
Q ss_pred ---CeeeEEecCCCccEEEEEee--CCEEEEEeCCCcEEEEECCCCC---ccEEEeccccCCeEEEEEeCCCCEEEEEeC
Q 014934 240 ---CKRVRTMEGHRLRVGALAWS--SSLLSSGSRDKSILQRDIRAQE---DFVSKLSGHKSEVCGLKWSYDNRELASGGN 311 (415)
Q Consensus 240 ---~~~~~~l~~h~~~V~~l~~~--~~~l~sgs~dg~I~iwd~~~~~---~~~~~~~~h~~~V~~l~~spdg~~lasg~~ 311 (415)
.+.+..+.+|...|.+++|+ +.+|++|+.|++|++||++... ..+..+.+|...|.+++|+|++.+|++|+.
T Consensus 94 ~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~ 173 (330)
T 2hes_X 94 TFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEALLASSSY 173 (330)
T ss_dssp -CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSSCEEEEEECSSSSEEEEEET
T ss_pred cccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCCceEEEEECCCCCEEEEEcC
Confidence 45677889999999999998 5799999999999999995432 346678899999999999999999999999
Q ss_pred CCcEEEEECCCC--ceeEEeccCCCcEEEEEEcCCCC-cEEEEEcCCCCCeEEEEECCCC--------cEEEEee--CCC
Q 014934 312 DNRLFVWNQHST--QPVLKYCEHTAAVKAIAWSPHLH-GLLASGGGTADRCIRFWNTTTN--------THLSCMD--TGS 378 (415)
Q Consensus 312 dg~I~iwd~~~~--~~~~~~~~h~~~V~~l~~sp~~~-~llasggg~~d~~I~iwd~~t~--------~~~~~~~--~~~ 378 (415)
|+.|++||..++ +++..+.+|...|.+++|+|++. .+|++++ .|+.|++||+.++ .+...+. +..
T Consensus 174 D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s--~D~~v~iw~~~~~~~~~~~~~~~~~~~~~~h~~ 251 (330)
T 2hes_X 174 DDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGS--DDSTVRVWKYMGDDEDDQQEWVCEAILPDVHKR 251 (330)
T ss_dssp TSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCSSSSCEEEEEE--TTSCEEEEEEEEECTTSCEEEEEEEECCSCCSS
T ss_pred CCeEEEEECCCCCeeEEEEccCCCCcEEEEEecCCCCeeEEEEEe--CCCeEEEEEecCCCccccceeEEeeeccccccc
Confidence 999999998776 67888999999999999999842 3678877 8999999998764 3333443 667
Q ss_pred CEEEEEECCCCCeEEEEEecCCCcEEEEECCCC
Q 014934 379 QVCNLVWSKNVNELVSTHGYSQNQIIVWRYPTM 411 (415)
Q Consensus 379 ~V~~l~~s~~~~~l~s~~g~~dg~I~vw~~~s~ 411 (415)
.|.+++|++++ .|++ ++.||.|+||+..+.
T Consensus 252 ~v~~v~~s~~~-~l~s--~~~dg~v~iw~~~~~ 281 (330)
T 2hes_X 252 QVYNVAWGFNG-LIAS--VGADGVLAVYEEVDG 281 (330)
T ss_dssp CEEEEEECTTS-CEEE--EETTSCEEEEEEETT
T ss_pred ceEEEEEcCCC-EEEE--EeCCCEEEEEEcCCC
Confidence 89999999765 6777 678999999998764
No 26
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=6.7e-33 Score=262.48 Aligned_cols=239 Identities=21% Similarity=0.302 Sum_probs=208.0
Q ss_pred cceeEeecCC-CcEEEEE-cCCeEEEEECCCCCeEEeEecCCCCCeEEEEEcCCCCeEEEEECCCcEEEEECCCCeeeEE
Q 014934 168 FYLNLVDWSS-HNVLAVG-LGNCVYLWNACSSKVTKLCDLGIDDSVCSVGWANRNTHLAVGTSHGKVQIWDASRCKRVRT 245 (415)
Q Consensus 168 ~~i~~l~ws~-~~~la~~-~d~~V~iwd~~~~~~~~~~~~~~~~~V~~v~~sp~g~~la~g~~dg~V~iwd~~~~~~~~~ 245 (415)
..|.+++|+| +++|+++ .|+.|++||+.+++....+. +|...|.+++|+|++++|++|+.||.|++||+.+++.+..
T Consensus 66 ~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~ 144 (312)
T 4ery_A 66 LGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLK-GHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKT 144 (312)
T ss_dssp SCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEE-CCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEE
T ss_pred CceEEEEEcCCCCEEEEECCCCEEEEEECCCCcEEEEEc-CCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEEEE
Confidence 4589999999 6666666 68999999999999887776 7889999999999999999999999999999999999999
Q ss_pred ecCCCccEEEEEee--CCEEEEEeCCCcEEEEECCCCCccEEEeccccCCeEEEEEeCCCCEEEEEeCCCcEEEEECCCC
Q 014934 246 MEGHRLRVGALAWS--SSLLSSGSRDKSILQRDIRAQEDFVSKLSGHKSEVCGLKWSYDNRELASGGNDNRLFVWNQHST 323 (415)
Q Consensus 246 l~~h~~~V~~l~~~--~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~spdg~~lasg~~dg~I~iwd~~~~ 323 (415)
+..|...|.+++|+ +.+|++|+.||.|++||+++..........+...+..++|+|++++|++++.|+.|++||++++
T Consensus 145 ~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~ 224 (312)
T 4ery_A 145 LPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKG 224 (312)
T ss_dssp ECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCSSCCCEEEEEECTTSSEEEEEETTTEEEEEETTTT
T ss_pred ecCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeeEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCC
Confidence 99999999999998 5799999999999999999887433444567778999999999999999999999999999999
Q ss_pred ceeEEeccCCCcEE--EEEEcCCCCcEEEEEcCCCCCeEEEEECCCCcEEEEee-CCCCEEEEEECCCCCeEEEEEecCC
Q 014934 324 QPVLKYCEHTAAVK--AIAWSPHLHGLLASGGGTADRCIRFWNTTTNTHLSCMD-TGSQVCNLVWSKNVNELVSTHGYSQ 400 (415)
Q Consensus 324 ~~~~~~~~h~~~V~--~l~~sp~~~~llasggg~~d~~I~iwd~~t~~~~~~~~-~~~~V~~l~~s~~~~~l~s~~g~~d 400 (415)
+.+..+.+|...+. ...+++.+..++++++ .|+.|++||+.+++.+..+. |...|.+++|+|+++.|++++...|
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~--~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~~~~~d 302 (312)
T 4ery_A 225 KCLKTYTGHKNEKYCIFANFSVTGGKWIVSGS--EDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALEND 302 (312)
T ss_dssp EEEEEECSSCCSSSCCCEEEECSSSCEEEECC--TTSCEEEEETTTCCEEEEECCCSSCEEEEEECSSSSEEEEEECTTT
T ss_pred cEEEEEEecCCceEEEEEEEEeCCCcEEEEEC--CCCEEEEEECCCchhhhhhhccCCcEEEEeecCcCCceEEEEccCC
Confidence 99999988876543 2345544445788877 89999999999999998886 6778999999999999998543479
Q ss_pred CcEEEEECC
Q 014934 401 NQIIVWRYP 409 (415)
Q Consensus 401 g~I~vw~~~ 409 (415)
+.|++|+..
T Consensus 303 ~~i~~W~~d 311 (312)
T 4ery_A 303 KTIKLWKSD 311 (312)
T ss_dssp CCEEEEECC
T ss_pred ccEEEecCC
Confidence 999999964
No 27
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=3.2e-33 Score=269.52 Aligned_cols=243 Identities=23% Similarity=0.409 Sum_probs=196.9
Q ss_pred CcceeEeecCC-CcEEEEE-cCCeEEEEECCCCCeEEeEec-CCCCCeEEEEEcCCCCeEEEEECCCcEEEEECCCC---
Q 014934 167 DFYLNLVDWSS-HNVLAVG-LGNCVYLWNACSSKVTKLCDL-GIDDSVCSVGWANRNTHLAVGTSHGKVQIWDASRC--- 240 (415)
Q Consensus 167 ~~~i~~l~ws~-~~~la~~-~d~~V~iwd~~~~~~~~~~~~-~~~~~V~~v~~sp~g~~la~g~~dg~V~iwd~~~~--- 240 (415)
...|++++|+| +++|+++ .|+.|++|+..++.......+ +|...|.+++|+|+|++|++|+.||.|++||+.++
T Consensus 61 ~~~v~~~~~sp~g~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~ 140 (345)
T 3fm0_A 61 QRTVRKVAWSPCGNYLASASFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEY 140 (345)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSCEEEEEECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCE
T ss_pred CCcEEEEEECCCCCEEEEEECCCcEEEEEccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCe
Confidence 34699999999 7777776 589999999988754333222 78999999999999999999999999999999765
Q ss_pred eeeEEecCCCccEEEEEee--CCEEEEEeCCCcEEEEECCCCC-ccEEEeccccCCeEEEEEeCCCCEEEEEeCCCcEEE
Q 014934 241 KRVRTMEGHRLRVGALAWS--SSLLSSGSRDKSILQRDIRAQE-DFVSKLSGHKSEVCGLKWSYDNRELASGGNDNRLFV 317 (415)
Q Consensus 241 ~~~~~l~~h~~~V~~l~~~--~~~l~sgs~dg~I~iwd~~~~~-~~~~~~~~h~~~V~~l~~spdg~~lasg~~dg~I~i 317 (415)
+.+..+.+|...|.+++|+ +.+|++|+.|+.|++||++... .....+.+|...|.+++|+|+|++||+|+.|+.|+|
T Consensus 141 ~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~v~i 220 (345)
T 3fm0_A 141 ECVSVLNSHTQDVKHVVWHPSQELLASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDRTVRI 220 (345)
T ss_dssp EEEEEECCCCSCEEEEEECSSSSCEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEE
T ss_pred EEEEEecCcCCCeEEEEECCCCCEEEEEeCCCcEEEEEecCCCEEEEEEecCCCCceEEEEECCCCCEEEEEeCCCeEEE
Confidence 4567788999999999998 4799999999999999998765 234678899999999999999999999999999999
Q ss_pred EECCCC---------------ceeEEecc-CCCcEEEEEEcCCCCcEEEEEcCCCCCeEEEEECCCCcE--------EEE
Q 014934 318 WNQHST---------------QPVLKYCE-HTAAVKAIAWSPHLHGLLASGGGTADRCIRFWNTTTNTH--------LSC 373 (415)
Q Consensus 318 wd~~~~---------------~~~~~~~~-h~~~V~~l~~sp~~~~llasggg~~d~~I~iwd~~t~~~--------~~~ 373 (415)
||.... +++..+.+ |...|.+++|+|++. .|++++ .|+.|++|+...+.. ...
T Consensus 221 W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~-~l~s~~--~d~~i~vw~~~~~~~~~~~~~~~~~~ 297 (345)
T 3fm0_A 221 WRQYLPGNEQGVACSGSDPSWKCICTLSGFHSRTIYDIAWCQLTG-ALATAC--GDDAIRVFQEDPNSDPQQPTFSLTAH 297 (345)
T ss_dssp EEEECTTCTTCCCCC---CEEEEEEEECSSCSSCEEEEEECTTTC-CEEEEE--TTSCEEEEEECTTSCTTSCCEEEEEE
T ss_pred eccccCCCCccceeeccCCccceeEEecCCCCCcEEEEEEecCCC-EEEEEe--CCCeEEEEEeCCCCCcceeeEEEEee
Confidence 996321 23444554 889999999999987 556665 699999999876431 111
Q ss_pred e--eCCCCEEEEEECCCCC-eEEEEEecCCCcEEEEECCCCccc
Q 014934 374 M--DTGSQVCNLVWSKNVN-ELVSTHGYSQNQIIVWRYPTMSKV 414 (415)
Q Consensus 374 ~--~~~~~V~~l~~s~~~~-~l~s~~g~~dg~I~vw~~~s~~~l 414 (415)
. .|...|.+++|+|++. .|++ |+.||.|++|++.+.+++
T Consensus 298 ~~~~h~~~V~~v~~~p~~~~~laS--~s~Dg~v~~W~~~~~~~~ 339 (345)
T 3fm0_A 298 LHQAHSQDVNCVAWNPKEPGLLAS--CSDDGEVAFWKYQRPEGL 339 (345)
T ss_dssp ETTSSSSCEEEEEECSSSTTEEEE--EETTSCEEEEEECC----
T ss_pred ecccccCcEeEeEEeCCCceEEEE--cCCCCcEEEEEecCCCCc
Confidence 1 3677899999999985 6777 779999999999987654
No 28
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.6e-33 Score=268.42 Aligned_cols=237 Identities=22% Similarity=0.394 Sum_probs=188.2
Q ss_pred CcceeEeecCC-CcEEEEE-cCCeEEEEECCCC-------CeEEeEecCCCCCeEEEEEcCCCCeEEEEECCCcEEEEEC
Q 014934 167 DFYLNLVDWSS-HNVLAVG-LGNCVYLWNACSS-------KVTKLCDLGIDDSVCSVGWANRNTHLAVGTSHGKVQIWDA 237 (415)
Q Consensus 167 ~~~i~~l~ws~-~~~la~~-~d~~V~iwd~~~~-------~~~~~~~~~~~~~V~~v~~sp~g~~la~g~~dg~V~iwd~ 237 (415)
.-.|++++|+| +++|+++ .|+.|+||+.... +....+. +|...|.+++|+|+|++||+|+.||.|++||+
T Consensus 58 ~~~v~~v~~sp~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~-~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~ 136 (330)
T 2hes_X 58 KKAIRSVAWRPHTSLLAAGSFDSTVSIWAKEESADRTFEMDLLAIIE-GHENEVKGVAWSNDGYYLATCSRDKSVWIWET 136 (330)
T ss_dssp CSCEEEEEECTTSSEEEEEETTSCEEEEEC-------CCCEEEEEEC-----CEEEEEECTTSCEEEEEETTSCEEEEEC
T ss_pred cCCEEEEEECCCCCEEEEEeCCCcEEEEEcccCcCccccceeEEEEc-CCCCcEEEEEECCCCCEEEEEeCCCEEEEEec
Confidence 34699999999 7777776 5899999998542 2333333 78999999999999999999999999999999
Q ss_pred CC----CeeeEEecCCCccEEEEEee--CCEEEEEeCCCcEEEEECCCCC-ccEEEeccccCCeEEEEEeCC--CCEEEE
Q 014934 238 SR----CKRVRTMEGHRLRVGALAWS--SSLLSSGSRDKSILQRDIRAQE-DFVSKLSGHKSEVCGLKWSYD--NRELAS 308 (415)
Q Consensus 238 ~~----~~~~~~l~~h~~~V~~l~~~--~~~l~sgs~dg~I~iwd~~~~~-~~~~~~~~h~~~V~~l~~spd--g~~las 308 (415)
.. .+++..+.+|...|.+++|+ +.+|++|+.|++|++||++... .++..+.+|...|.+++|+|+ +.+|++
T Consensus 137 ~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s 216 (330)
T 2hes_X 137 DESGEEYECISVLQEHSQDVKHVIWHPSEALLASSSYDDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLCS 216 (330)
T ss_dssp CTTCCCCEEEEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCSSSSCEEEE
T ss_pred cCCCCCeEEEEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCCeeEEEEccCCCCcEEEEEecCCCCeeEEEE
Confidence 43 35678889999999999998 4799999999999999987653 357788999999999999998 779999
Q ss_pred EeCCCcEEEEECCCC--------ceeEEecc-CCCcEEEEEEcCCCCcEEEEEcCCCCCeEEEEECCCCc--EEEEe--e
Q 014934 309 GGNDNRLFVWNQHST--------QPVLKYCE-HTAAVKAIAWSPHLHGLLASGGGTADRCIRFWNTTTNT--HLSCM--D 375 (415)
Q Consensus 309 g~~dg~I~iwd~~~~--------~~~~~~~~-h~~~V~~l~~sp~~~~llasggg~~d~~I~iwd~~t~~--~~~~~--~ 375 (415)
|+.|+.|+|||+..+ .....+.. |...|.+++|++++ +|++++ .|+.|++||..+++ .+... .
T Consensus 217 ~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~~--~l~s~~--~dg~v~iw~~~~~~~~~~~~~~~~ 292 (330)
T 2hes_X 217 GSDDSTVRVWKYMGDDEDDQQEWVCEAILPDVHKRQVYNVAWGFNG--LIASVG--ADGVLAVYEEVDGEWKVFAKRALC 292 (330)
T ss_dssp EETTSCEEEEEEEEECTTSCEEEEEEEECCSCCSSCEEEEEECTTS--CEEEEE--TTSCEEEEEEETTEEEEEEEESCT
T ss_pred EeCCCeEEEEEecCCCccccceeEEeeecccccccceEEEEEcCCC--EEEEEe--CCCEEEEEEcCCCceEEEeccccc
Confidence 999999999998754 34445554 99999999999764 677776 89999999998874 33332 2
Q ss_pred CCC-CEEEEEECC--CCCeEEEEEecCCCcEEEEECCC
Q 014934 376 TGS-QVCNLVWSK--NVNELVSTHGYSQNQIIVWRYPT 410 (415)
Q Consensus 376 ~~~-~V~~l~~s~--~~~~l~s~~g~~dg~I~vw~~~s 410 (415)
+.. .|.+++|+| +++.|++ |+.||.|+||++..
T Consensus 293 h~~~~v~~v~~~~~~~~~~las--~s~Dg~v~~W~~~~ 328 (330)
T 2hes_X 293 HGVYEINVVKWLELNGKTILAT--GGDDGIVNFWSLEK 328 (330)
T ss_dssp TTTSCEEEEEEC-----CCEEE--EETTSEEEEEEC--
T ss_pred cccceEEEEEEecCCCceEEEE--ecCCCcEEEEEecc
Confidence 444 799999999 6888888 78999999999864
No 29
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=5e-33 Score=267.69 Aligned_cols=234 Identities=19% Similarity=0.371 Sum_probs=195.5
Q ss_pred cceeEeecCC-CcEEEEE-cCCeEEEEECCCCCeEEeEecCCCCCeEEEEEcCCCCeEEEEECCCcEEEEECCCCeeeEE
Q 014934 168 FYLNLVDWSS-HNVLAVG-LGNCVYLWNACSSKVTKLCDLGIDDSVCSVGWANRNTHLAVGTSHGKVQIWDASRCKRVRT 245 (415)
Q Consensus 168 ~~i~~l~ws~-~~~la~~-~d~~V~iwd~~~~~~~~~~~~~~~~~V~~v~~sp~g~~la~g~~dg~V~iwd~~~~~~~~~ 245 (415)
..|++++|+| +.+|+++ .|+.|++||+.+++....+. +|...|.+++|+|++++|++|+.||.|++||+... ....
T Consensus 77 ~~V~~~~~~~~~~~l~s~s~D~~v~lwd~~~~~~~~~~~-~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~-~~~~ 154 (343)
T 2xzm_R 77 HFVSDLALSQENCFAISSSWDKTLRLWDLRTGTTYKRFV-GHQSEVYSVAFSPDNRQILSAGAEREIKLWNILGE-CKFS 154 (343)
T ss_dssp SCEEEEEECSSTTEEEEEETTSEEEEEETTSSCEEEEEE-CCCSCEEEEEECSSTTEEEEEETTSCEEEEESSSC-EEEE
T ss_pred CceEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEEEc-CCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccCC-ceee
Confidence 4699999999 6666666 68999999999999887776 89999999999999999999999999999999843 3333
Q ss_pred ec---CCCccEEEEEeeC------------CEEEEEeCCCcEEEEECCCCCccEEEeccccCCeEEEEEeCCCCEEEEEe
Q 014934 246 ME---GHRLRVGALAWSS------------SLLSSGSRDKSILQRDIRAQEDFVSKLSGHKSEVCGLKWSYDNRELASGG 310 (415)
Q Consensus 246 l~---~h~~~V~~l~~~~------------~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~spdg~~lasg~ 310 (415)
.. +|...|.+++|++ .+|++++.||.|++||... .....+.+|...|.+++|+|+|++||+|+
T Consensus 155 ~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~--~~~~~~~~h~~~v~~~~~s~~g~~l~sgs 232 (343)
T 2xzm_R 155 SAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNTNF--QIRYTFKAHESNVNHLSISPNGKYIATGG 232 (343)
T ss_dssp CCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEETTT--EEEEEEECCSSCEEEEEECTTSSEEEEEE
T ss_pred eecccCCCceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEcCCC--ceeEEEcCccccceEEEECCCCCEEEEEc
Confidence 33 7899999999984 4799999999999999532 35677889999999999999999999999
Q ss_pred CCCcEEEEECCC-CceeEEeccCCCcEEEEEEcCCCCcEEEEEcCCCCCeEEEEECCCCcEEE--Eee------------
Q 014934 311 NDNRLFVWNQHS-TQPVLKYCEHTAAVKAIAWSPHLHGLLASGGGTADRCIRFWNTTTNTHLS--CMD------------ 375 (415)
Q Consensus 311 ~dg~I~iwd~~~-~~~~~~~~~h~~~V~~l~~sp~~~~llasggg~~d~~I~iwd~~t~~~~~--~~~------------ 375 (415)
.|+.|+|||+.+ ..+...+ .+...|.+++|+|++. +++++ .|+.|++||+.+++... .+.
T Consensus 233 ~dg~v~iwd~~~~~~~~~~~-~~~~~v~~v~~sp~~~-~la~~---~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (343)
T 2xzm_R 233 KDKKLLIWDILNLTYPQREF-DAGSTINQIAFNPKLQ-WVAVG---TDQGVKIFNLMTQSKAPVCTIEAEPITKAEGQKG 307 (343)
T ss_dssp TTCEEEEEESSCCSSCSEEE-ECSSCEEEEEECSSSC-EEEEE---ESSCEEEEESSSCCSCSEEECCCCSGGGBTTBCC
T ss_pred CCCeEEEEECCCCcccceee-cCCCcEEEEEECCCCC-EEEEE---CCCCEEEEEeCCCCCCceEEeecCcchhhhhhcC
Confidence 999999999954 4445554 4566799999999986 66655 48899999998876533 332
Q ss_pred CCCCEEEEEECCCCCeEEEEEecCCCcEEEEECCCCc
Q 014934 376 TGSQVCNLVWSKNVNELVSTHGYSQNQIIVWRYPTMS 412 (415)
Q Consensus 376 ~~~~V~~l~~s~~~~~l~s~~g~~dg~I~vw~~~s~~ 412 (415)
+...|.+++|+|+|++|++ |+.||.|++|+++++.
T Consensus 308 ~~~~v~~~~~sp~g~~l~s--g~~Dg~v~~w~~~~g~ 342 (343)
T 2xzm_R 308 KNPQCTSLAWNALGKKLFA--GFTDGVIRTFSFETSA 342 (343)
T ss_dssp SCCCEEEEEECSSSCCEEE--EETTSEEEEEEEEEEE
T ss_pred CCCceEEEEECCCCCeEEE--ecCCceEEEEEEEccC
Confidence 4567999999999999999 7899999999987643
No 30
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=3.7e-34 Score=272.65 Aligned_cols=238 Identities=21% Similarity=0.364 Sum_probs=198.4
Q ss_pred CcceeEeecCC-CcEEEEE-cCCeEEEEECCCCCe--EEeEecCCCCCeEEEEEcC--CCCeEEEEECCCcEEEEECCCC
Q 014934 167 DFYLNLVDWSS-HNVLAVG-LGNCVYLWNACSSKV--TKLCDLGIDDSVCSVGWAN--RNTHLAVGTSHGKVQIWDASRC 240 (415)
Q Consensus 167 ~~~i~~l~ws~-~~~la~~-~d~~V~iwd~~~~~~--~~~~~~~~~~~V~~v~~sp--~g~~la~g~~dg~V~iwd~~~~ 240 (415)
.-.|++++|++ +++||++ .|+.|+|||+.++.. ...+. +|.+.|.+++|++ ++++|++|+.||+|+|||+.++
T Consensus 13 ~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~-gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd~~~~ 91 (316)
T 3bg1_A 13 EDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLR-GHEGPVWQVAWAHPMYGNILASCSYDRKVIIWREENG 91 (316)
T ss_dssp -CCEEEEEECGGGCEEEEEETTTEEEEEEEETTEEEEEEEEE-CCSSCEEEEEECCGGGSSCEEEEETTSCEEEECCSSS
T ss_pred cCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCcEEEEEEc-CCCccEEEEEeCCCCCCCEEEEEECCCEEEEEECCCC
Confidence 34699999999 6777776 589999999988753 23333 8999999999986 4899999999999999999876
Q ss_pred --eeeEEecCCCccEEEEEeeC----CEEEEEeCCCcEEEEECCCCCcc--EEEeccccCCeEEEEEeCC----------
Q 014934 241 --KRVRTMEGHRLRVGALAWSS----SLLSSGSRDKSILQRDIRAQEDF--VSKLSGHKSEVCGLKWSYD---------- 302 (415)
Q Consensus 241 --~~~~~l~~h~~~V~~l~~~~----~~l~sgs~dg~I~iwd~~~~~~~--~~~~~~h~~~V~~l~~spd---------- 302 (415)
+.+..+.+|...|.+++|++ .+|++|+.|+.|++||++..... ...+.+|...|.+++|+|+
T Consensus 92 ~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~ 171 (316)
T 3bg1_A 92 TWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGSLIDHP 171 (316)
T ss_dssp CCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSSSCBCCCEECCCCCC------C
T ss_pred cceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeeccccCCcceEEEccccCCccccccc
Confidence 46677889999999999985 48999999999999999876422 3455689999999999997
Q ss_pred -------CCEEEEEeCCCcEEEEECCCC---ceeEEeccCCCcEEEEEEcCCC---CcEEEEEcCCCCCeEEEEECCCC-
Q 014934 303 -------NRELASGGNDNRLFVWNQHST---QPVLKYCEHTAAVKAIAWSPHL---HGLLASGGGTADRCIRFWNTTTN- 368 (415)
Q Consensus 303 -------g~~lasg~~dg~I~iwd~~~~---~~~~~~~~h~~~V~~l~~sp~~---~~llasggg~~d~~I~iwd~~t~- 368 (415)
+++||+|+.|+.|+|||++.. +++..+.+|...|.+++|+|++ ..+|++++ .|+.|++||+.+.
T Consensus 172 ~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~las~s--~D~~v~iw~~~~~~ 249 (316)
T 3bg1_A 172 SGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCS--QDGRVFIWTCDDAS 249 (316)
T ss_dssp CSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSSCSCCEEEEEE--TTCEEEEEECSSTT
T ss_pred cccCccccceEEEecCCCeEEEEEeCCCCccceeeecccCCCceEEEEecCCCCCCCceEEEEc--CCCeEEEEEccCcc
Confidence 478999999999999999755 4667788999999999999986 24888887 8999999999763
Q ss_pred --c-EEEE-eeCCCCEEEEEECCCCCeEEEEEecCCCcEEEEECC
Q 014934 369 --T-HLSC-MDTGSQVCNLVWSKNVNELVSTHGYSQNQIIVWRYP 409 (415)
Q Consensus 369 --~-~~~~-~~~~~~V~~l~~s~~~~~l~s~~g~~dg~I~vw~~~ 409 (415)
+ .... ..+...|.+++|+|+++.|++ ++.|+.|+||+..
T Consensus 250 ~~~~~~~~~~~~~~~v~~v~~sp~g~~las--~~~D~~v~lw~~~ 292 (316)
T 3bg1_A 250 SNTWSPKLLHKFNDVVWHVSWSITANILAV--SGGDNKVTLWKES 292 (316)
T ss_dssp CCCCBCCEEEECSSCEEEEEECTTTCCEEE--EESSSCEEEEEEC
T ss_pred ccchhhhhhhcCCCcEEEEEEcCCCCEEEE--EcCCCeEEEEEEC
Confidence 1 1111 236788999999999999998 7789999999976
No 31
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=7.3e-34 Score=275.52 Aligned_cols=241 Identities=16% Similarity=0.268 Sum_probs=196.3
Q ss_pred CcceeEeecCC-CcEEEEEc-------CCeEEEEECCCCCeEEe---EecCCCCCeEEEEEcCCCCeEEEEECCCcEEEE
Q 014934 167 DFYLNLVDWSS-HNVLAVGL-------GNCVYLWNACSSKVTKL---CDLGIDDSVCSVGWANRNTHLAVGTSHGKVQIW 235 (415)
Q Consensus 167 ~~~i~~l~ws~-~~~la~~~-------d~~V~iwd~~~~~~~~~---~~~~~~~~V~~v~~sp~g~~la~g~~dg~V~iw 235 (415)
+-.|++++|+| +.+|++++ |+.|++|+..++..... ...+|...|++++|+|++.+ ++++.||.|+||
T Consensus 42 ~~~V~~v~fSpDG~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~d~~~-l~~s~dg~v~lW 120 (357)
T 4g56_B 42 EVQIGAVRYRRDGALLLAASSLSSRTWGGSIWVFKDPEGAPNESLCTAGVQTEAGVTDVAWVSEKGI-LVASDSGAVELW 120 (357)
T ss_dssp CSEEEEEEECSSSCEEEEEECSSSSSCCEEEEEESSCC---CGGGCSEEEECSSCEEEEEEETTTEE-EEEETTSCEEEC
T ss_pred cCCEEEEEECCCCCEEEEEcCCCCccccCeEEEEECCCCCcceeEecccCCCCCCEEEEEEcCCCCE-EEEECCCEEEEe
Confidence 44699999999 88888885 56899999877654222 12267889999999999864 567889999999
Q ss_pred ECCCCeeeE----EecCCCccEEEEEee--CCEEEEEeCCCcEEEEECCCCCccEEEeccccCCeEEEEEeCCCC-EEEE
Q 014934 236 DASRCKRVR----TMEGHRLRVGALAWS--SSLLSSGSRDKSILQRDIRAQEDFVSKLSGHKSEVCGLKWSYDNR-ELAS 308 (415)
Q Consensus 236 d~~~~~~~~----~l~~h~~~V~~l~~~--~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~spdg~-~las 308 (415)
|+.+++... ...+|...|.+++|+ +++|++|+.|+.|++||++++. .+..+.+|...|.+++|+|++. +|++
T Consensus 121 d~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~~~~-~~~~~~~h~~~v~~v~~s~~~~~~~~s 199 (357)
T 4g56_B 121 EILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQKA-VLKSYNAHSSEVNCVAACPGKDTIFLS 199 (357)
T ss_dssp --------CCCCEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTTE-EEEEECCCSSCEEEEEECTTCSSCEEE
T ss_pred eccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCc-EEEEEcCCCCCEEEEEEccCCCceeee
Confidence 998876443 345799999999998 4799999999999999999886 6788899999999999999875 7899
Q ss_pred EeCCCcEEEEECCCCceeEEec--cCCCcEEEEEEcCCCCcEEEEEcCCCCCeEEEEECCCCcEEEEee-CCCCEEEEEE
Q 014934 309 GGNDNRLFVWNQHSTQPVLKYC--EHTAAVKAIAWSPHLHGLLASGGGTADRCIRFWNTTTNTHLSCMD-TGSQVCNLVW 385 (415)
Q Consensus 309 g~~dg~I~iwd~~~~~~~~~~~--~h~~~V~~l~~sp~~~~llasggg~~d~~I~iwd~~t~~~~~~~~-~~~~V~~l~~ 385 (415)
++.|+.|+|||+++++++..+. .|...+.+++|+|++..+|++|+ .|+.|++||+++++++..+. +...|.+++|
T Consensus 200 ~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~--~d~~i~~wd~~~~~~~~~~~~~~~~v~~l~~ 277 (357)
T 4g56_B 200 CGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFACGD--ETGNVSLVNIKNPDSAQTSAVHSQNITGLAY 277 (357)
T ss_dssp EETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEE--SSSCEEEEESSCGGGCEEECCCSSCEEEEEE
T ss_pred eccCCceEEEECCCCceeeeeeeccccccccchhhhhcccceEEEee--cccceeEEECCCCcEeEEEeccceeEEEEEE
Confidence 9999999999999988766543 57788999999999888999987 89999999999999888876 6678999999
Q ss_pred CCCCC-eEEEEEecCCCcEEEEECCCCcc
Q 014934 386 SKNVN-ELVSTHGYSQNQIIVWRYPTMSK 413 (415)
Q Consensus 386 s~~~~-~l~s~~g~~dg~I~vw~~~s~~~ 413 (415)
+|++. +|++ |+.|+.|+|||+.+.+.
T Consensus 278 sp~~~~~las--gs~D~~i~iwd~~~~~~ 304 (357)
T 4g56_B 278 SYHSSPFLAS--ISEDCTVAVLDADFSEV 304 (357)
T ss_dssp CSSSSCCEEE--EETTSCEEEECTTSCEE
T ss_pred cCCCCCEEEE--EeCCCEEEEEECCCCcE
Confidence 99985 5666 77899999999987653
No 32
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=1.9e-32 Score=260.18 Aligned_cols=241 Identities=21% Similarity=0.265 Sum_probs=211.4
Q ss_pred CcceeEeecCC-CcEEEEEcCCeEEEEECCCCCeEEeE---e-cCCCCCeEEEEEcCCCCeEEEEECCCcEEEEECCCCe
Q 014934 167 DFYLNLVDWSS-HNVLAVGLGNCVYLWNACSSKVTKLC---D-LGIDDSVCSVGWANRNTHLAVGTSHGKVQIWDASRCK 241 (415)
Q Consensus 167 ~~~i~~l~ws~-~~~la~~~d~~V~iwd~~~~~~~~~~---~-~~~~~~V~~v~~sp~g~~la~g~~dg~V~iwd~~~~~ 241 (415)
.-.|.+++|+| +.+|+++.++.|++|++.+++..... . .+|...|.+++|+|++++|++|+.||.|++||+.+++
T Consensus 51 ~~~v~~~~~~~~~~~l~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~ 130 (337)
T 1gxr_A 51 GEVVCAVTISNPTRHVYTGGKGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPT 130 (337)
T ss_dssp SSCCCEEEECSSSSEEEEECBSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEESSSEEEEEECCCC-
T ss_pred CCceEEEEEecCCcEEEEcCCCeEEEEECCCCCceeeeecccccCCCCcEEEEEEcCCCCEEEEEcCCCcEEEEECCCCC
Confidence 44688999999 78888888999999999886532222 1 2678999999999999999999999999999998876
Q ss_pred --eeEEecCCCccEEEEEee--CCEEEEEeCCCcEEEEECCCCCccEEEeccccCCeEEEEEeCCCCEEEEEeCCCcEEE
Q 014934 242 --RVRTMEGHRLRVGALAWS--SSLLSSGSRDKSILQRDIRAQEDFVSKLSGHKSEVCGLKWSYDNRELASGGNDNRLFV 317 (415)
Q Consensus 242 --~~~~l~~h~~~V~~l~~~--~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~spdg~~lasg~~dg~I~i 317 (415)
....+..|...|.+++|+ +++|++++.||.|++||+++.. ....+..|...|.+++|+|++++|++++.|+.|++
T Consensus 131 ~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~-~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~ 209 (337)
T 1gxr_A 131 PRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQT-LVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRS 209 (337)
T ss_dssp -EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTE-EEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEE
T ss_pred cceeeecccCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCc-eeeeeecccCceEEEEECCCCCEEEEEecCCcEEE
Confidence 667788899999999998 4799999999999999999876 57788899999999999999999999999999999
Q ss_pred EECCCCceeEEeccCCCcEEEEEEcCCCCcEEEEEcCCCCCeEEEEECCCCcEEEEeeCCCCEEEEEECCCCCeEEEEEe
Q 014934 318 WNQHSTQPVLKYCEHTAAVKAIAWSPHLHGLLASGGGTADRCIRFWNTTTNTHLSCMDTGSQVCNLVWSKNVNELVSTHG 397 (415)
Q Consensus 318 wd~~~~~~~~~~~~h~~~V~~l~~sp~~~~llasggg~~d~~I~iwd~~t~~~~~~~~~~~~V~~l~~s~~~~~l~s~~g 397 (415)
||+++++.+..+ .|...+.+++|+|++. ++++++ .|+.|++||+.+++......+...|.+++|+|++++|++ +
T Consensus 210 ~d~~~~~~~~~~-~~~~~v~~~~~s~~~~-~l~~~~--~~~~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~--~ 283 (337)
T 1gxr_A 210 WDLREGRQLQQH-DFTSQIFSLGYCPTGE-WLAVGM--ESSNVEVLHVNKPDKYQLHLHESCVLSLKFAYCGKWFVS--T 283 (337)
T ss_dssp EETTTTEEEEEE-ECSSCEEEEEECTTSS-EEEEEE--TTSCEEEEETTSSCEEEECCCSSCEEEEEECTTSSEEEE--E
T ss_pred EECCCCceEeee-cCCCceEEEEECCCCC-EEEEEc--CCCcEEEEECCCCCeEEEcCCccceeEEEECCCCCEEEE--e
Confidence 999999888877 5788999999999997 555555 799999999999988766668889999999999999998 7
Q ss_pred cCCCcEEEEECCCCccc
Q 014934 398 YSQNQIIVWRYPTMSKV 414 (415)
Q Consensus 398 ~~dg~I~vw~~~s~~~l 414 (415)
+.||.|++|++.+.+.+
T Consensus 284 ~~dg~i~~~~~~~~~~~ 300 (337)
T 1gxr_A 284 GKDNLLNAWRTPYGASI 300 (337)
T ss_dssp ETTSEEEEEETTTCCEE
T ss_pred cCCCcEEEEECCCCeEE
Confidence 78999999999987653
No 33
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=2.5e-32 Score=262.75 Aligned_cols=235 Identities=20% Similarity=0.314 Sum_probs=198.1
Q ss_pred cceeEeec-----CC--CcEEEEE-cCCeEEEEECCCCC-------eEEeEecCCCCCeEEEEEcCCCCeEEEEECCCcE
Q 014934 168 FYLNLVDW-----SS--HNVLAVG-LGNCVYLWNACSSK-------VTKLCDLGIDDSVCSVGWANRNTHLAVGTSHGKV 232 (415)
Q Consensus 168 ~~i~~l~w-----s~--~~~la~~-~d~~V~iwd~~~~~-------~~~~~~~~~~~~V~~v~~sp~g~~la~g~~dg~V 232 (415)
-.|++++| ++ +.+|++| .|+.|++||+.+++ ....+. +|...|.+++|+|++.+|++|+.||+|
T Consensus 22 ~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~-~h~~~V~~~~~~~~~~~l~s~s~D~~v 100 (343)
T 2xzm_R 22 DWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALT-GHNHFVSDLALSQENCFAISSSWDKTL 100 (343)
T ss_dssp SCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEEC-CCSSCEEEEEECSSTTEEEEEETTSEE
T ss_pred hhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhc-cCCCceEEEEECCCCCEEEEEcCCCcE
Confidence 36889998 54 5566666 68999999987543 223333 899999999999999999999999999
Q ss_pred EEEECCCCeeeEEecCCCccEEEEEee--CCEEEEEeCCCcEEEEECCCCCccEEEec---cccCCeEEEEEeCCC----
Q 014934 233 QIWDASRCKRVRTMEGHRLRVGALAWS--SSLLSSGSRDKSILQRDIRAQEDFVSKLS---GHKSEVCGLKWSYDN---- 303 (415)
Q Consensus 233 ~iwd~~~~~~~~~l~~h~~~V~~l~~~--~~~l~sgs~dg~I~iwd~~~~~~~~~~~~---~h~~~V~~l~~spdg---- 303 (415)
++||+.+++.+..+.+|...|.+++|+ +.+|++|+.|++|++||+.... ..... +|...|.+++|+|++
T Consensus 101 ~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~~--~~~~~~~~~~~~~v~~~~~~~~~~~~~ 178 (343)
T 2xzm_R 101 RLWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNILGEC--KFSSAEKENHSDWVSCVRYSPIMKSAN 178 (343)
T ss_dssp EEEETTSSCEEEEEECCCSCEEEEEECSSTTEEEEEETTSCEEEEESSSCE--EEECCTTTSCSSCEEEEEECCCCCSCS
T ss_pred EEEECCCCcEEEEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccCCc--eeeeecccCCCceeeeeeecccccccc
Confidence 999999999999999999999999998 5799999999999999998432 22332 788999999999987
Q ss_pred ------CEEEEEeCCCcEEEEECCCCceeEEeccCCCcEEEEEEcCCCCcEEEEEcCCCCCeEEEEEC-CCCcEEEEeeC
Q 014934 304 ------RELASGGNDNRLFVWNQHSTQPVLKYCEHTAAVKAIAWSPHLHGLLASGGGTADRCIRFWNT-TTNTHLSCMDT 376 (415)
Q Consensus 304 ------~~lasg~~dg~I~iwd~~~~~~~~~~~~h~~~V~~l~~sp~~~~llasggg~~d~~I~iwd~-~t~~~~~~~~~ 376 (415)
.+|++|+.|+.|++|| ...+....+.+|...|.+++|+|+++ +|++++ .|+.|++||+ ........+.+
T Consensus 179 ~~~~~~~~l~s~~~d~~i~iwd-~~~~~~~~~~~h~~~v~~~~~s~~g~-~l~sgs--~dg~v~iwd~~~~~~~~~~~~~ 254 (343)
T 2xzm_R 179 KVQPFAPYFASVGWDGRLKVWN-TNFQIRYTFKAHESNVNHLSISPNGK-YIATGG--KDKKLLIWDILNLTYPQREFDA 254 (343)
T ss_dssp CCCSSCCEEEEEETTSEEEEEE-TTTEEEEEEECCSSCEEEEEECTTSS-EEEEEE--TTCEEEEEESSCCSSCSEEEEC
T ss_pred ccCCCCCEEEEEcCCCEEEEEc-CCCceeEEEcCccccceEEEECCCCC-EEEEEc--CCCeEEEEECCCCcccceeecC
Confidence 7999999999999999 45667778889999999999999997 677776 8999999999 44555666667
Q ss_pred CCCEEEEEECCCCCeEEEEEecCCCcEEEEECCCCc
Q 014934 377 GSQVCNLVWSKNVNELVSTHGYSQNQIIVWRYPTMS 412 (415)
Q Consensus 377 ~~~V~~l~~s~~~~~l~s~~g~~dg~I~vw~~~s~~ 412 (415)
+..|.+++|+|++.++++ | .|+.|++|++.+.+
T Consensus 255 ~~~v~~v~~sp~~~~la~--~-~d~~v~iw~~~~~~ 287 (343)
T 2xzm_R 255 GSTINQIAFNPKLQWVAV--G-TDQGVKIFNLMTQS 287 (343)
T ss_dssp SSCEEEEEECSSSCEEEE--E-ESSCEEEEESSSCC
T ss_pred CCcEEEEEECCCCCEEEE--E-CCCCEEEEEeCCCC
Confidence 788999999999988765 4 57889999997654
No 34
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=2.4e-31 Score=252.47 Aligned_cols=233 Identities=17% Similarity=0.243 Sum_probs=205.3
Q ss_pred CcceeEeecCC-CcEEEEE-cCCeEEEEECCCCCe--EEeEecCCCCCeEEEEEcCCCCeEEEEECCCcEEEEECCCCee
Q 014934 167 DFYLNLVDWSS-HNVLAVG-LGNCVYLWNACSSKV--TKLCDLGIDDSVCSVGWANRNTHLAVGTSHGKVQIWDASRCKR 242 (415)
Q Consensus 167 ~~~i~~l~ws~-~~~la~~-~d~~V~iwd~~~~~~--~~~~~~~~~~~V~~v~~sp~g~~la~g~~dg~V~iwd~~~~~~ 242 (415)
...+.+++|+| +++|+++ .++.|++|++.+++. ...+. .|...|.+++|+|++++|++|+.||.|++||+.+++.
T Consensus 97 ~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~-~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~ 175 (337)
T 1gxr_A 97 DNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELT-SSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTL 175 (337)
T ss_dssp TSBEEEEEECTTSSEEEEEESSSEEEEEECCCC--EEEEEEE-CSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEE
T ss_pred CCcEEEEEEcCCCCEEEEEcCCCcEEEEECCCCCcceeeecc-cCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCce
Confidence 45699999999 6666666 579999999998873 33333 7788999999999999999999999999999999999
Q ss_pred eEEecCCCccEEEEEee--CCEEEEEeCCCcEEEEECCCCCccEEEeccccCCeEEEEEeCCCCEEEEEeCCCcEEEEEC
Q 014934 243 VRTMEGHRLRVGALAWS--SSLLSSGSRDKSILQRDIRAQEDFVSKLSGHKSEVCGLKWSYDNRELASGGNDNRLFVWNQ 320 (415)
Q Consensus 243 ~~~l~~h~~~V~~l~~~--~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~spdg~~lasg~~dg~I~iwd~ 320 (415)
+..+..|...|.+++|+ +.+|++++.||.|++||++... ....+ .|...+.+++|+|++++|++++.|+.|++||+
T Consensus 176 ~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~-~~~~~-~~~~~v~~~~~s~~~~~l~~~~~~~~i~~~~~ 253 (337)
T 1gxr_A 176 VRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGR-QLQQH-DFTSQIFSLGYCPTGEWLAVGMESSNVEVLHV 253 (337)
T ss_dssp EEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTE-EEEEE-ECSSCEEEEEECTTSSEEEEEETTSCEEEEET
T ss_pred eeeeecccCceEEEEECCCCCEEEEEecCCcEEEEECCCCc-eEeee-cCCCceEEEEECCCCCEEEEEcCCCcEEEEEC
Confidence 99999999999999998 5799999999999999999876 34443 47789999999999999999999999999999
Q ss_pred CCCceeEEeccCCCcEEEEEEcCCCCcEEEEEcCCCCCeEEEEECCCCcEEEEeeCCCCEEEEEECCCCCeEEEEEecCC
Q 014934 321 HSTQPVLKYCEHTAAVKAIAWSPHLHGLLASGGGTADRCIRFWNTTTNTHLSCMDTGSQVCNLVWSKNVNELVSTHGYSQ 400 (415)
Q Consensus 321 ~~~~~~~~~~~h~~~V~~l~~sp~~~~llasggg~~d~~I~iwd~~t~~~~~~~~~~~~V~~l~~s~~~~~l~s~~g~~d 400 (415)
.+++. ..+..|...|.+++|+|+++ +|++++ .|+.|++||+.+++.+....+...|.+++|+|++++|++ ++.|
T Consensus 254 ~~~~~-~~~~~~~~~v~~~~~~~~~~-~l~~~~--~dg~i~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~--~~~d 327 (337)
T 1gxr_A 254 NKPDK-YQLHLHESCVLSLKFAYCGK-WFVSTG--KDNLLNAWRTPYGASIFQSKESSSVLSCDISVDDKYIVT--GSGD 327 (337)
T ss_dssp TSSCE-EEECCCSSCEEEEEECTTSS-EEEEEE--TTSEEEEEETTTCCEEEEEECSSCEEEEEECTTSCEEEE--EETT
T ss_pred CCCCe-EEEcCCccceeEEEECCCCC-EEEEec--CCCcEEEEECCCCeEEEEecCCCcEEEEEECCCCCEEEE--ecCC
Confidence 98865 46678999999999999988 666665 799999999999999988888999999999999999998 7789
Q ss_pred CcEEEEEC
Q 014934 401 NQIIVWRY 408 (415)
Q Consensus 401 g~I~vw~~ 408 (415)
|.|++|++
T Consensus 328 g~i~iw~~ 335 (337)
T 1gxr_A 328 KKATVYEV 335 (337)
T ss_dssp SCEEEEEE
T ss_pred CeEEEEEE
Confidence 99999996
No 35
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=100.00 E-value=4.1e-32 Score=257.73 Aligned_cols=241 Identities=17% Similarity=0.274 Sum_probs=202.8
Q ss_pred cceeEeecCC-CcEEEEE-cCCeEEEEECCCCC----eEEeEecCCCCCeEEEEEcC--CCCeEEEEECCCcEEEEECCC
Q 014934 168 FYLNLVDWSS-HNVLAVG-LGNCVYLWNACSSK----VTKLCDLGIDDSVCSVGWAN--RNTHLAVGTSHGKVQIWDASR 239 (415)
Q Consensus 168 ~~i~~l~ws~-~~~la~~-~d~~V~iwd~~~~~----~~~~~~~~~~~~V~~v~~sp--~g~~la~g~~dg~V~iwd~~~ 239 (415)
-.|++++|+| +++|+++ .|+.|++|++.++. ....+. +|...|++++|+| ++++|++|+.||.|++||+.+
T Consensus 12 ~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~vwd~~~ 90 (351)
T 3f3f_A 12 DLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWR-AHDSSIVAIDWASPEYGRIIASASYDKTVKLWEEDP 90 (351)
T ss_dssp SCEEEEEECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEE-CCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEECT
T ss_pred cceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCcceecceec-cCCCcEEEEEEcCCCCCCEEEEEcCCCeEEEEecCC
Confidence 3699999999 6677776 57999999998763 333333 7899999999999 699999999999999999987
Q ss_pred C---------eeeEEecCCCccEEEEEee----CCEEEEEeCCCcEEEEECCCCCccEE------------EeccccCCe
Q 014934 240 C---------KRVRTMEGHRLRVGALAWS----SSLLSSGSRDKSILQRDIRAQEDFVS------------KLSGHKSEV 294 (415)
Q Consensus 240 ~---------~~~~~l~~h~~~V~~l~~~----~~~l~sgs~dg~I~iwd~~~~~~~~~------------~~~~h~~~V 294 (415)
+ +.+..+..|...|.+++|+ +.+|++++.||.|++||++....... ....|...+
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (351)
T 3f3f_A 91 DQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPANHLQSD 170 (351)
T ss_dssp TSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCCSSCSCCC
T ss_pred CcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhccccccccccccccccCCcccce
Confidence 6 6678888999999999998 45899999999999999987652110 012678899
Q ss_pred EEEEEeCC---CCEEEEEeCCCcEEEEECCCCce--eEEeccCCCcEEEEEEcCCCC---cEEEEEcCCCCCeEEEEECC
Q 014934 295 CGLKWSYD---NRELASGGNDNRLFVWNQHSTQP--VLKYCEHTAAVKAIAWSPHLH---GLLASGGGTADRCIRFWNTT 366 (415)
Q Consensus 295 ~~l~~spd---g~~lasg~~dg~I~iwd~~~~~~--~~~~~~h~~~V~~l~~sp~~~---~llasggg~~d~~I~iwd~~ 366 (415)
.+++|+|+ +.+|++++.|+.+.+|+...++. +..+.+|...|.+++|+|++. .+|++++ .|+.|++||+.
T Consensus 171 ~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~--~dg~i~iwd~~ 248 (351)
T 3f3f_A 171 FCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGC--KDGRIRIFKIT 248 (351)
T ss_dssp EEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEE--TTSCEEEEEEE
T ss_pred eEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceEEEEEc--CCCeEEEEeCC
Confidence 99999997 99999999999998888887765 677889999999999999983 4788887 89999999998
Q ss_pred CC----------------------------------------------cEEEEee-CCCCEEEEEECCCCCeEEEEEecC
Q 014934 367 TN----------------------------------------------THLSCMD-TGSQVCNLVWSKNVNELVSTHGYS 399 (415)
Q Consensus 367 t~----------------------------------------------~~~~~~~-~~~~V~~l~~s~~~~~l~s~~g~~ 399 (415)
++ +.+..+. +...|++++|+|++++|++ |+.
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s--~~~ 326 (351)
T 3f3f_A 249 EKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDDHNGEVWSVSWNLTGTILSS--AGD 326 (351)
T ss_dssp ECC---------------------------------------CCSEEEEEEEEECTTSSCEEEEEECSSSCCEEE--EET
T ss_pred CCcCccccCCcccceeccCCCcccccccccccccccceeeeecccccccEEEEEecccccEEEEEEcCCCCEEEE--ecC
Confidence 75 3444444 6678999999999999999 779
Q ss_pred CCcEEEEECCCCcc
Q 014934 400 QNQIIVWRYPTMSK 413 (415)
Q Consensus 400 dg~I~vw~~~s~~~ 413 (415)
||.|+||++.+.++
T Consensus 327 dg~v~iw~~~~~~~ 340 (351)
T 3f3f_A 327 DGKVRLWKATYSNE 340 (351)
T ss_dssp TSCEEEEEECTTSC
T ss_pred CCcEEEEecCcCcc
Confidence 99999999997654
No 36
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=6.1e-32 Score=284.28 Aligned_cols=239 Identities=21% Similarity=0.336 Sum_probs=207.9
Q ss_pred CcceeEeecCC--CcEEEEE-cCCeEEEEECCCCC-----eEEeEecCCCCCeEEEEEcCCCCeEEEEECCCcEEEEECC
Q 014934 167 DFYLNLVDWSS--HNVLAVG-LGNCVYLWNACSSK-----VTKLCDLGIDDSVCSVGWANRNTHLAVGTSHGKVQIWDAS 238 (415)
Q Consensus 167 ~~~i~~l~ws~--~~~la~~-~d~~V~iwd~~~~~-----~~~~~~~~~~~~V~~v~~sp~g~~la~g~~dg~V~iwd~~ 238 (415)
.-.|++++|++ .++|++| .|+.|++|++.+.. ....+. +|...|.+++|+|+|++|++|+.||.|+|||+.
T Consensus 382 ~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~-~h~~~v~~v~~s~~g~~l~sgs~Dg~v~vwd~~ 460 (694)
T 3dm0_A 382 TDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLT-GHSHFVEDVVLSSDGQFALSGSWDGELRLWDLA 460 (694)
T ss_dssp SSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEE-CCSSCEEEEEECTTSSEEEEEETTSEEEEEETT
T ss_pred CceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCcccccccceec-CCCCcEEEEEECCCCCEEEEEeCCCcEEEEECC
Confidence 34699999998 3566665 68999999987643 223333 899999999999999999999999999999999
Q ss_pred CCeeeEEecCCCccEEEEEee--CCEEEEEeCCCcEEEEECCCCCccEEE---eccccCCeEEEEEeCCC--CEEEEEeC
Q 014934 239 RCKRVRTMEGHRLRVGALAWS--SSLLSSGSRDKSILQRDIRAQEDFVSK---LSGHKSEVCGLKWSYDN--RELASGGN 311 (415)
Q Consensus 239 ~~~~~~~l~~h~~~V~~l~~~--~~~l~sgs~dg~I~iwd~~~~~~~~~~---~~~h~~~V~~l~~spdg--~~lasg~~ 311 (415)
+++.+..+.+|...|.+++|+ +.+|++|+.|++|++||+..... ... ..+|...|.+++|+|++ ..|++|+.
T Consensus 461 ~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~-~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~ 539 (694)
T 3dm0_A 461 AGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECK-YTISEGGEGHRDWVSCVRFSPNTLQPTIVSASW 539 (694)
T ss_dssp TTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEE-EEECSSTTSCSSCEEEEEECSCSSSCEEEEEET
T ss_pred CCcceeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCcc-eeeccCCCCCCCcEEEEEEeCCCCcceEEEEeC
Confidence 999999999999999999998 57999999999999999875532 222 14688899999999987 68999999
Q ss_pred CCcEEEEECCCCceeEEeccCCCcEEEEEEcCCCCcEEEEEcCCCCCeEEEEECCCCcEEEEeeCCCCEEEEEECCCCCe
Q 014934 312 DNRLFVWNQHSTQPVLKYCEHTAAVKAIAWSPHLHGLLASGGGTADRCIRFWNTTTNTHLSCMDTGSQVCNLVWSKNVNE 391 (415)
Q Consensus 312 dg~I~iwd~~~~~~~~~~~~h~~~V~~l~~sp~~~~llasggg~~d~~I~iwd~~t~~~~~~~~~~~~V~~l~~s~~~~~ 391 (415)
|+.|+|||+++++....+.+|...|.+++|+|++. +|++++ .|+.|++||+.+++.+..+.....|.+++|+|++..
T Consensus 540 d~~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~-~l~sg~--~Dg~i~iwd~~~~~~~~~~~~~~~v~~~~~sp~~~~ 616 (694)
T 3dm0_A 540 DKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGS-LCASGG--KDGVVLLWDLAEGKKLYSLEANSVIHALCFSPNRYW 616 (694)
T ss_dssp TSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSS-EEEEEE--TTSBCEEEETTTTEEEECCBCSSCEEEEEECSSSSE
T ss_pred CCeEEEEECCCCcEEEEEcCCCCCEEEEEEeCCCC-EEEEEe--CCCeEEEEECCCCceEEEecCCCcEEEEEEcCCCcE
Confidence 99999999999999999999999999999999987 777777 899999999999999998888889999999999988
Q ss_pred EEEEEecCCCcEEEEECCCCcc
Q 014934 392 LVSTHGYSQNQIIVWRYPTMSK 413 (415)
Q Consensus 392 l~s~~g~~dg~I~vw~~~s~~~ 413 (415)
|++ + .++.|+|||+.+.+.
T Consensus 617 l~~--~-~~~~i~iwd~~~~~~ 635 (694)
T 3dm0_A 617 LCA--A-TEHGIKIWDLESKSI 635 (694)
T ss_dssp EEE--E-ETTEEEEEETTTTEE
T ss_pred EEE--E-cCCCEEEEECCCCCC
Confidence 877 4 466799999987653
No 37
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.9e-32 Score=264.37 Aligned_cols=238 Identities=21% Similarity=0.364 Sum_probs=201.9
Q ss_pred cceeEeecCC-CcEEEEE-cCCeEEEEECCCC--CeEEeEecCCCCCeEEEEEcCC--CCeEEEEECCCcEEEEECCCCe
Q 014934 168 FYLNLVDWSS-HNVLAVG-LGNCVYLWNACSS--KVTKLCDLGIDDSVCSVGWANR--NTHLAVGTSHGKVQIWDASRCK 241 (415)
Q Consensus 168 ~~i~~l~ws~-~~~la~~-~d~~V~iwd~~~~--~~~~~~~~~~~~~V~~v~~sp~--g~~la~g~~dg~V~iwd~~~~~ 241 (415)
-.|++++|+| +++|+++ .|+.|++|++..+ +....+. +|...|++++|+++ +++|++|+.||.|++||+.+++
T Consensus 12 ~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~ 90 (379)
T 3jrp_A 12 ELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLT-GHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGR 90 (379)
T ss_dssp CCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEEC-CCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEEETTE
T ss_pred ccEEEEEEcCCCCEEEEEECCCcEEEEecCCCcceeeeEec-CCCCcEEEEEeCCCCCCCEEEEeccCCEEEEEEcCCCc
Confidence 3599999999 7777777 5899999999844 4444443 78999999999987 9999999999999999999887
Q ss_pred --eeEEecCCCccEEEEEeeC----CEEEEEeCCCcEEEEECCCCCc-cEEEeccccCCeEEEEEeC-------------
Q 014934 242 --RVRTMEGHRLRVGALAWSS----SLLSSGSRDKSILQRDIRAQED-FVSKLSGHKSEVCGLKWSY------------- 301 (415)
Q Consensus 242 --~~~~l~~h~~~V~~l~~~~----~~l~sgs~dg~I~iwd~~~~~~-~~~~~~~h~~~V~~l~~sp------------- 301 (415)
.+..+..|...|.+++|++ .+|++++.||.|++||++.... ....+.+|...|.+++|+|
T Consensus 91 ~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 170 (379)
T 3jrp_A 91 WSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTK 170 (379)
T ss_dssp EEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEECCTTCEEEEEECCCC----------C
T ss_pred eeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEecCCCCceEEEEEcCccccccccccCCC
Confidence 7788889999999999984 5899999999999999988742 3456778999999999999
Q ss_pred CCCEEEEEeCCCcEEEEECCCCc----eeEEeccCCCcEEEEEEcCCC--CcEEEEEcCCCCCeEEEEECCCCc---EEE
Q 014934 302 DNRELASGGNDNRLFVWNQHSTQ----PVLKYCEHTAAVKAIAWSPHL--HGLLASGGGTADRCIRFWNTTTNT---HLS 372 (415)
Q Consensus 302 dg~~lasg~~dg~I~iwd~~~~~----~~~~~~~h~~~V~~l~~sp~~--~~llasggg~~d~~I~iwd~~t~~---~~~ 372 (415)
++.+|++|+.|+.|++||++++. .+..+.+|...|.+++|+|++ ..+|++++ .|+.|++||+.++. ...
T Consensus 171 ~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~--~dg~i~iwd~~~~~~~~~~~ 248 (379)
T 3jrp_A 171 ESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVS--QDRTCIIWTQDNEQGPWKKT 248 (379)
T ss_dssp TTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEE--TTSCEEEEEESSTTSCCEEE
T ss_pred CCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEEe--CCCEEEEEeCCCCCccceee
Confidence 69999999999999999998764 446777899999999999994 34777776 89999999999874 222
Q ss_pred Eee---CCCCEEEEEECCCCCeEEEEEecCCCcEEEEECCC
Q 014934 373 CMD---TGSQVCNLVWSKNVNELVSTHGYSQNQIIVWRYPT 410 (415)
Q Consensus 373 ~~~---~~~~V~~l~~s~~~~~l~s~~g~~dg~I~vw~~~s 410 (415)
.+. +...|.+++|+|++++|++ ++.||.|++|++..
T Consensus 249 ~~~~~~~~~~v~~~~~s~~g~~l~~--~~~dg~i~iw~~~~ 287 (379)
T 3jrp_A 249 LLKEEKFPDVLWRASWSLSGNVLAL--SGGDNKVTLWKENL 287 (379)
T ss_dssp ESSSSCCSSCEEEEEECSSSCCEEE--EESSSSEEEEEEEE
T ss_pred eeccccCCCcEEEEEEcCCCCEEEE--ecCCCcEEEEeCCC
Confidence 222 5678999999999999998 66899999999874
No 38
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=9.1e-32 Score=275.58 Aligned_cols=228 Identities=25% Similarity=0.449 Sum_probs=201.9
Q ss_pred cceeEeecCC-CcEEEEE-cCCeEEEEECCCCCeEEeEecCCCCCeEEEEEcCCCCeEEEEECCCcEEEEECCCCeeeEE
Q 014934 168 FYLNLVDWSS-HNVLAVG-LGNCVYLWNACSSKVTKLCDLGIDDSVCSVGWANRNTHLAVGTSHGKVQIWDASRCKRVRT 245 (415)
Q Consensus 168 ~~i~~l~ws~-~~~la~~-~d~~V~iwd~~~~~~~~~~~~~~~~~V~~v~~sp~g~~la~g~~dg~V~iwd~~~~~~~~~ 245 (415)
..+.+++|+| +..|+++ .++.|++|+. +++....+. +|...|++++|+|+|++|++|+.||.|++||. +++.+..
T Consensus 345 ~~v~~~~~s~~g~~l~~~~~dg~v~~~~~-~~~~~~~~~-~~~~~v~~~~~s~dg~~l~~~~~d~~v~~~~~-~~~~~~~ 421 (577)
T 2ymu_A 345 SSVWGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLT-GHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQT 421 (577)
T ss_dssp SCEEEEEECTTSSEEEEEETTSEEEEEET-TCCEEEEEE-CCSSCEEEEEECTTSSCEEEEETTSEEEEECT-TCCEEEE
T ss_pred CCEEEEEECCCCCEEEEEeCCCEEEEEcC-CCCEEEEec-CCCCCeEEEEECCCCCEEEEEeCCCEEEEEeC-CCCEEEE
Confidence 4588999999 6777777 5789999996 456666555 78899999999999999999999999999995 5678888
Q ss_pred ecCCCccEEEEEee--CCEEEEEeCCCcEEEEECCCCCccEEEeccccCCeEEEEEeCCCCEEEEEeCCCcEEEEECCCC
Q 014934 246 MEGHRLRVGALAWS--SSLLSSGSRDKSILQRDIRAQEDFVSKLSGHKSEVCGLKWSYDNRELASGGNDNRLFVWNQHST 323 (415)
Q Consensus 246 l~~h~~~V~~l~~~--~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~spdg~~lasg~~dg~I~iwd~~~~ 323 (415)
+.+|...|.+++|+ +.+|++++.|+.|++||.... .+..+.+|...|.+++|+|++++||+++.|+.|+|||. ++
T Consensus 422 ~~~~~~~v~~~~~s~d~~~l~~~~~d~~v~~w~~~~~--~~~~~~~~~~~v~~~~~spd~~~las~~~d~~i~iw~~-~~ 498 (577)
T 2ymu_A 422 LTGHSSSVWGVAFSPDDQTIASASDDKTVKLWNRNGQ--LLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NG 498 (577)
T ss_dssp EECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTSC--EEEEEECCSSCEEEEEECTTSCEEEEEETTSEEEEEET-TS
T ss_pred ecCCCCCeEEEEECCCCCEEEEEcCCCEEEEEECCCC--EEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEEcC-CC
Confidence 99999999999998 479999999999999997532 57788899999999999999999999999999999995 67
Q ss_pred ceeEEeccCCCcEEEEEEcCCCCcEEEEEcCCCCCeEEEEECCCCcEEEEee-CCCCEEEEEECCCCCeEEEEEecCCCc
Q 014934 324 QPVLKYCEHTAAVKAIAWSPHLHGLLASGGGTADRCIRFWNTTTNTHLSCMD-TGSQVCNLVWSKNVNELVSTHGYSQNQ 402 (415)
Q Consensus 324 ~~~~~~~~h~~~V~~l~~sp~~~~llasggg~~d~~I~iwd~~t~~~~~~~~-~~~~V~~l~~s~~~~~l~s~~g~~dg~ 402 (415)
+.+..+.+|...|++++|+|+++ +|++++ .|+.|++||. +++++..+. |...|.+++|+|++++|++ ++.|+.
T Consensus 499 ~~~~~~~~h~~~v~~l~~s~dg~-~l~s~~--~dg~v~lwd~-~~~~~~~~~~h~~~v~~~~fs~dg~~l~s--~~~D~~ 572 (577)
T 2ymu_A 499 QLLQTLTGHSSSVRGVAFSPDGQ-TIASAS--DDKTVKLWNR-NGQLLQTLTGHSSSVWGVAFSPDGQTIAS--ASSDKT 572 (577)
T ss_dssp CEEEEEECCSSCEEEEEECTTSS-CEEEEE--TTSEEEEECT-TSCEEEEEECCSSCEEEEEECTTSSCEEE--EETTSC
T ss_pred CEEEEEeCCCCCEEEEEEcCCCC-EEEEEE--CcCEEEEEeC-CCCEEEEEcCCCCCEEEEEEcCCCCEEEE--EeCCCE
Confidence 88899999999999999999998 566666 7999999996 677777775 7789999999999999998 678999
Q ss_pred EEEEE
Q 014934 403 IIVWR 407 (415)
Q Consensus 403 I~vw~ 407 (415)
|++||
T Consensus 573 i~~Wd 577 (577)
T 2ymu_A 573 VKLWN 577 (577)
T ss_dssp EEEEC
T ss_pred EEEeC
Confidence 99997
No 39
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.4e-31 Score=254.39 Aligned_cols=255 Identities=15% Similarity=0.189 Sum_probs=218.5
Q ss_pred CCCCCCceeccCCCCCCCcceeEeecCC-CcEEEEE-cCCeEEEEECCCCCeEEeEecCCCCCeEEEEEcCCCCeEEEEE
Q 014934 150 KVPRSPYKILDAPALQDDFYLNLVDWSS-HNVLAVG-LGNCVYLWNACSSKVTKLCDLGIDDSVCSVGWANRNTHLAVGT 227 (415)
Q Consensus 150 ~i~~~p~~~ld~~~l~~~~~i~~l~ws~-~~~la~~-~d~~V~iwd~~~~~~~~~~~~~~~~~V~~v~~sp~g~~la~g~ 227 (415)
.......+.+.... ..-.|++++|+| +++|+++ .++.|++||+.+++....+. +|...|.+++|+|++++|++++
T Consensus 17 ~~~G~~~~~~~l~~--h~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~-~h~~~v~~~~~~~~~~~l~s~~ 93 (369)
T 3zwl_B 17 YFQGSHMKAIKLTG--HERPLTQVKYNKEGDLLFSCSKDSSASVWYSLNGERLGTLD-GHTGTIWSIDVDCFTKYCVTGS 93 (369)
T ss_dssp CSSCCSEEEEEEEC--CSSCEEEEEECTTSCEEEEEESSSCEEEEETTTCCEEEEEC-CCSSCEEEEEECTTSSEEEEEE
T ss_pred EEeccccccEEEEE--eeceEEEEEEcCCCCEEEEEeCCCEEEEEeCCCchhhhhhh-hcCCcEEEEEEcCCCCEEEEEe
Confidence 33444444433332 234699999999 6777776 58899999999999888775 7899999999999999999999
Q ss_pred CCCcEEEEECCCCeeeEEecCCCccEEEEEee--CCEEEEEeCC-----CcEEEEECCCCCc----------cEEEeccc
Q 014934 228 SHGKVQIWDASRCKRVRTMEGHRLRVGALAWS--SSLLSSGSRD-----KSILQRDIRAQED----------FVSKLSGH 290 (415)
Q Consensus 228 ~dg~V~iwd~~~~~~~~~l~~h~~~V~~l~~~--~~~l~sgs~d-----g~I~iwd~~~~~~----------~~~~~~~h 290 (415)
.||.|++||+.+++.+..+. |...|.+++|+ +.+|++++.+ +.|.+||++.... ....+..|
T Consensus 94 ~dg~i~iwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 172 (369)
T 3zwl_B 94 ADYSIKLWDVSNGQCVATWK-SPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITH 172 (369)
T ss_dssp TTTEEEEEETTTCCEEEEEE-CSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECC
T ss_pred CCCeEEEEECCCCcEEEEee-cCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCC
Confidence 99999999999999988888 88999999998 5799999999 9999999986542 23445556
Q ss_pred cC--CeEEEEEeCCCCEEEEEeCCCcEEEEECCC-CceeEEeccCCCcEEEEEEcCCCCcEEEEEcCCCCCeEEEEECCC
Q 014934 291 KS--EVCGLKWSYDNRELASGGNDNRLFVWNQHS-TQPVLKYCEHTAAVKAIAWSPHLHGLLASGGGTADRCIRFWNTTT 367 (415)
Q Consensus 291 ~~--~V~~l~~spdg~~lasg~~dg~I~iwd~~~-~~~~~~~~~h~~~V~~l~~sp~~~~llasggg~~d~~I~iwd~~t 367 (415)
.. .+.+++|+|++++|++|+.||.|++||+++ .+.+..+..|...|.+++|+|++. +|++++ .|+.|++||+.+
T Consensus 173 ~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~--~d~~i~v~d~~~ 249 (369)
T 3zwl_B 173 EGLDAATVAGWSTKGKYIIAGHKDGKISKYDVSNNYEYVDSIDLHEKSISDMQFSPDLT-YFITSS--RDTNSFLVDVST 249 (369)
T ss_dssp TTCCCEEEEEECGGGCEEEEEETTSEEEEEETTTTTEEEEEEECCSSCEEEEEECTTSS-EEEEEE--TTSEEEEEETTT
T ss_pred cCccceeEEEEcCCCCEEEEEcCCCEEEEEECCCCcEeEEEEecCCCceeEEEECCCCC-EEEEec--CCceEEEEECCC
Confidence 66 899999999999999999999999999998 788889999999999999999987 556665 799999999999
Q ss_pred CcEEEEeeCCCCEEEEEECCCCCeEEEEEecCCC--------------cEEEEECCCCcc
Q 014934 368 NTHLSCMDTGSQVCNLVWSKNVNELVSTHGYSQN--------------QIIVWRYPTMSK 413 (415)
Q Consensus 368 ~~~~~~~~~~~~V~~l~~s~~~~~l~s~~g~~dg--------------~I~vw~~~s~~~ 413 (415)
++.+..+.+...+..++|+|+++.+++ +..++ .|++|++.+.+.
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~ 307 (369)
T 3zwl_B 250 LQVLKKYETDCPLNTAVITPLKEFIIL--GGGQEAKDVTTTSANEGKFEARFYHKIFEEE 307 (369)
T ss_dssp CCEEEEEECSSCEEEEEECSSSSEEEE--EECCC-------------CEEEEEETTTCCE
T ss_pred CceeeeecCCCCceeEEecCCCceEEE--eecCCCceEEEEecCCCcceeEEEecCCCcc
Confidence 999999999999999999999999999 55566 899999987764
No 40
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=7.6e-32 Score=260.04 Aligned_cols=236 Identities=12% Similarity=0.193 Sum_probs=206.2
Q ss_pred cceeEeecCC-CcEEEEE-cCCeEEEEECCCCC--eEEeEecCCCCCeEEEEEcCCCCeEEEEECCCcEEEEECCCCeee
Q 014934 168 FYLNLVDWSS-HNVLAVG-LGNCVYLWNACSSK--VTKLCDLGIDDSVCSVGWANRNTHLAVGTSHGKVQIWDASRCKRV 243 (415)
Q Consensus 168 ~~i~~l~ws~-~~~la~~-~d~~V~iwd~~~~~--~~~~~~~~~~~~V~~v~~sp~g~~la~g~~dg~V~iwd~~~~~~~ 243 (415)
..|.+++|+| +++|+++ .++.|++|+..+++ ....+. +|...|++++|+|++++|++|+.||.|++||+.+++..
T Consensus 9 ~~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~ 87 (372)
T 1k8k_C 9 EPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELK-EHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTWK 87 (372)
T ss_dssp SCCCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEE-CCSSCEEEEEEETTTTEEEEEETTSCEEEEEEETTEEE
T ss_pred CCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCcEEeeeeec-CCCCcccEEEEeCCCCEEEEEcCCCeEEEEECCCCeee
Confidence 3588999999 7788888 68999999999887 555554 78999999999999999999999999999999888754
Q ss_pred EE--ecCCCccEEEEEee--CCEEEEEeCCCcEEEEECCCCCc---cEEEeccccCCeEEEEEeCCCCEEEEEeCCCcEE
Q 014934 244 RT--MEGHRLRVGALAWS--SSLLSSGSRDKSILQRDIRAQED---FVSKLSGHKSEVCGLKWSYDNRELASGGNDNRLF 316 (415)
Q Consensus 244 ~~--l~~h~~~V~~l~~~--~~~l~sgs~dg~I~iwd~~~~~~---~~~~~~~h~~~V~~l~~spdg~~lasg~~dg~I~ 316 (415)
.. +..|...|.+++|+ +.+|++|+.|+.|++||++.... ......+|...|.+++|+|++++|++|+.|+.|+
T Consensus 88 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~ 167 (372)
T 1k8k_C 88 PTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCR 167 (372)
T ss_dssp EEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETTSCEE
T ss_pred eeEEeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEcCCCCEE
Confidence 44 46799999999998 57999999999999999988763 2333467899999999999999999999999999
Q ss_pred EEEC------------------CCCceeEEeccCCCcEEEEEEcCCCCcEEEEEcCCCCCeEEEEECCCCcEEEEee-CC
Q 014934 317 VWNQ------------------HSTQPVLKYCEHTAAVKAIAWSPHLHGLLASGGGTADRCIRFWNTTTNTHLSCMD-TG 377 (415)
Q Consensus 317 iwd~------------------~~~~~~~~~~~h~~~V~~l~~sp~~~~llasggg~~d~~I~iwd~~t~~~~~~~~-~~ 377 (415)
+||+ ..++.+..+..|...|.+++|+|++. +|++++ .|+.|++||+.+++++..+. +.
T Consensus 168 ~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~--~d~~i~i~d~~~~~~~~~~~~~~ 244 (372)
T 1k8k_C 168 IFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGS-RVAWVS--HDSTVCLADADKKMAVATLASET 244 (372)
T ss_dssp EEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSS-EEEEEE--TTTEEEEEEGGGTTEEEEEECSS
T ss_pred EEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCC-EEEEEe--CCCEEEEEECCCCceeEEEccCC
Confidence 9995 46788889989999999999999987 666666 79999999999999998887 45
Q ss_pred CCEEEEEECCCCCeEEEEEecCCCcEEEEECCC
Q 014934 378 SQVCNLVWSKNVNELVSTHGYSQNQIIVWRYPT 410 (415)
Q Consensus 378 ~~V~~l~~s~~~~~l~s~~g~~dg~I~vw~~~s 410 (415)
..|.+++|+|++.+|++ | .|+.|++|++.+
T Consensus 245 ~~v~~~~~~~~~~~l~~--~-~d~~i~i~~~~~ 274 (372)
T 1k8k_C 245 LPLLAVTFITESSLVAA--G-HDCFPVLFTYDS 274 (372)
T ss_dssp CCEEEEEEEETTEEEEE--E-TTSSCEEEEEET
T ss_pred CCeEEEEEecCCCEEEE--E-eCCeEEEEEccC
Confidence 68999999999998877 6 799999999977
No 41
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=3e-32 Score=265.74 Aligned_cols=239 Identities=14% Similarity=0.185 Sum_probs=207.7
Q ss_pred CcceeEeecCCCcEEEEEcCCeEEEEECCCCC------eEEeEecCCCCCeEEEEEcCC----C---CeEEEEECCCcEE
Q 014934 167 DFYLNLVDWSSHNVLAVGLGNCVYLWNACSSK------VTKLCDLGIDDSVCSVGWANR----N---THLAVGTSHGKVQ 233 (415)
Q Consensus 167 ~~~i~~l~ws~~~~la~~~d~~V~iwd~~~~~------~~~~~~~~~~~~V~~v~~sp~----g---~~la~g~~dg~V~ 233 (415)
.-.|++++|+|..+++++.|+.|++|++.+++ ....+. +|...|++++|+|+ | ++|++|+.||.|+
T Consensus 16 ~~~i~~~~~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~~g~~~~~l~s~~~dg~i~ 94 (397)
T 1sq9_A 16 DADIFSVSACNSFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHF-VHKSGLHHVDVLQAIERDAFELCLVATTSFSGDLL 94 (397)
T ss_dssp SSCEEEEEECSSEEEEEETTSEEEEEESBCCTTCCGGGGEEEEE-CCTTCEEEEEEEEEEETTTEEEEEEEEEETTSCEE
T ss_pred hcCeEEEEecCCeEEEEcCCCEEEEEECCCcccccCCCcceEEe-cCCCcEEEEEEecccccCCccccEEEEEcCCCCEE
Confidence 34699999999444445578999999999988 455554 78999999999999 9 9999999999999
Q ss_pred EEECCCCee-----eEEecCC-----CccEEEEEee----C--CE-EEEEeCCCcEEEEECCC------CCccEE-----
Q 014934 234 IWDASRCKR-----VRTMEGH-----RLRVGALAWS----S--SL-LSSGSRDKSILQRDIRA------QEDFVS----- 285 (415)
Q Consensus 234 iwd~~~~~~-----~~~l~~h-----~~~V~~l~~~----~--~~-l~sgs~dg~I~iwd~~~------~~~~~~----- 285 (415)
+||+.+++. +..+..| ...|.+++|+ + .+ |++|+.||.|++||++. ... +.
T Consensus 95 iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~-~~~~~~~ 173 (397)
T 1sq9_A 95 FYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLT-LNWSPTL 173 (397)
T ss_dssp EEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHHHTT-TCCCCEE
T ss_pred EEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCccccccccce-eeccCcc
Confidence 999988876 8888888 5899999999 4 67 99999999999999988 442 33
Q ss_pred Ee-------ccccCCeEEEEEeCCCCEEEEEeCCCcEEEEECCCCceeEEecc---C---CCcEEEEEEcCCCCcEEEEE
Q 014934 286 KL-------SGHKSEVCGLKWSYDNRELASGGNDNRLFVWNQHSTQPVLKYCE---H---TAAVKAIAWSPHLHGLLASG 352 (415)
Q Consensus 286 ~~-------~~h~~~V~~l~~spdg~~lasg~~dg~I~iwd~~~~~~~~~~~~---h---~~~V~~l~~sp~~~~llasg 352 (415)
.+ ..|...|.+++|+|++ +|++|+.|+.|++||+++++++..+.. | ...|.+++|+|++. +|+++
T Consensus 174 ~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~-~l~~~ 251 (397)
T 1sq9_A 174 ELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGS-LLAIA 251 (397)
T ss_dssp EEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSSTT-EEEEE
T ss_pred eeeeeeccccCCCCCceEEEECCCc-eEEEEeCCCcEEEEECCCCceeEEEeccccccccCCccceEEECCCCC-EEEEE
Confidence 45 4588999999999999 999999999999999999999999988 9 99999999999987 56666
Q ss_pred cCCCC---CeEEEEECCCCcEEEEee--------------CCCCEEEEEECCCCCeEEEEEecCCCcEEEEECCCCcc
Q 014934 353 GGTAD---RCIRFWNTTTNTHLSCMD--------------TGSQVCNLVWSKNVNELVSTHGYSQNQIIVWRYPTMSK 413 (415)
Q Consensus 353 gg~~d---~~I~iwd~~t~~~~~~~~--------------~~~~V~~l~~s~~~~~l~s~~g~~dg~I~vw~~~s~~~ 413 (415)
+ .| +.|++||+.+++.+..+. +...|.+++|+|++++|++ |+.||.|++||+.+++.
T Consensus 252 ~--~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~--~~~dg~i~iwd~~~~~~ 325 (397)
T 1sq9_A 252 H--DSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCS--AGWDGKLRFWDVKTKER 325 (397)
T ss_dssp E--EETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEE--EETTSEEEEEETTTTEE
T ss_pred e--cCCCCceEEEEECCCCcccceeccCcccccccccccccCCcEEEEEECCCCCEEEE--EeCCCeEEEEEcCCCce
Confidence 5 68 999999999999988886 5788999999999999998 77899999999988764
No 42
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=1.2e-31 Score=278.07 Aligned_cols=238 Identities=18% Similarity=0.247 Sum_probs=199.8
Q ss_pred CcceeEeecCC-Cc-EEEEE-cCCeEEEEECCCCCeEEeEecCCCCCeEEEEEcCCCCeEEEEECCCcEEEEECCCCeee
Q 014934 167 DFYLNLVDWSS-HN-VLAVG-LGNCVYLWNACSSKVTKLCDLGIDDSVCSVGWANRNTHLAVGTSHGKVQIWDASRCKRV 243 (415)
Q Consensus 167 ~~~i~~l~ws~-~~-~la~~-~d~~V~iwd~~~~~~~~~~~~~~~~~V~~v~~sp~g~~la~g~~dg~V~iwd~~~~~~~ 243 (415)
.-.|++++|+| +. .|+++ .|+.|++||..+++....+. +|...|.+++|+|+|++||+|+.||+|+|||+.+++.+
T Consensus 147 ~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~-~H~~~V~~v~fspdg~~las~s~D~~i~lwd~~~g~~~ 225 (611)
T 1nr0_A 147 ARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFG-EHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKT 225 (611)
T ss_dssp SSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEEC-CCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEE
T ss_pred CCCceEEEECCCCCeEEEEEeCCCeEEEEECCCCeEeeeec-cccCceEEEEECCCCCEEEEEECCCcEEEEECCCCcEe
Confidence 34699999999 33 35554 68999999998888777665 89999999999999999999999999999999999988
Q ss_pred EEec-------CCCccEEEEEee--CCEEEEEeCCCcEEEEECCCCCc--------------------------------
Q 014934 244 RTME-------GHRLRVGALAWS--SSLLSSGSRDKSILQRDIRAQED-------------------------------- 282 (415)
Q Consensus 244 ~~l~-------~h~~~V~~l~~~--~~~l~sgs~dg~I~iwd~~~~~~-------------------------------- 282 (415)
..+. +|...|.+++|+ +.+|++|+.|++|++||++++..
T Consensus 226 ~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~ 305 (611)
T 1nr0_A 226 GVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGF 305 (611)
T ss_dssp EECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCC
T ss_pred eeeccccccccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeecCCCCccceeEEEEEcCCEEEEEeCCCc
Confidence 8884 799999999998 57999999999999999986542
Q ss_pred ----------cEEEeccccCCeEEEEEeCCCCEEEEEeCCCcEEEEECCCCceeEEe-c---------------------
Q 014934 283 ----------FVSKLSGHKSEVCGLKWSYDNRELASGGNDNRLFVWNQHSTQPVLKY-C--------------------- 330 (415)
Q Consensus 283 ----------~~~~~~~h~~~V~~l~~spdg~~lasg~~dg~I~iwd~~~~~~~~~~-~--------------------- 330 (415)
....+.+|...|.+++|+|+|++|++|+.|+.|++||+.+++....+ .
T Consensus 306 i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~~l~s~s~D~~v~~Wd~~~~~~~~~~~~~h~~~v~~~~~s~~~~l~s~s 385 (611)
T 1nr0_A 306 INFVNPELGSIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKTTSKGDLFTVS 385 (611)
T ss_dssp EEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEECSSCSCSSCEEEEEECTTSCEEEEE
T ss_pred EEEEeCCCCCcceEEcCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCCCceeeecccCCcceEEEEEECCCCcEEEEE
Confidence 12344689999999999999999999999999999998876432221 0
Q ss_pred ------------------------------------------------------------cCCCcEEEEEEcCCCCcEEE
Q 014934 331 ------------------------------------------------------------EHTAAVKAIAWSPHLHGLLA 350 (415)
Q Consensus 331 ------------------------------------------------------------~h~~~V~~l~~sp~~~~lla 350 (415)
.|...+.+++|+|+++ +|+
T Consensus 386 ~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~v~~~~~~~~~~~~~~~~v~~va~spdg~-~la 464 (611)
T 1nr0_A 386 WDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIYSHGKLTEVPISYNSSCVALSNDKQ-FVA 464 (611)
T ss_dssp TTTEEEEECSSSSSSCTTSCCEEECSSCEEEEEECTTSSCEEEEESSEEEEEETTEEEEEECSSCEEEEEECTTSC-EEE
T ss_pred cCCceEEeecCCccccccceeeeecCCCCcEEEEeCCCcEEEEEeCceEEEEeCCceeeeecCCCceEEEEeCCCC-EEE
Confidence 1234567899999987 777
Q ss_pred EEcCCCCCeEEEEECCCCcE--EEEeeCCCCEEEEEECCCCCeEEEEEecCCCcEEEEECCC
Q 014934 351 SGGGTADRCIRFWNTTTNTH--LSCMDTGSQVCNLVWSKNVNELVSTHGYSQNQIIVWRYPT 410 (415)
Q Consensus 351 sggg~~d~~I~iwd~~t~~~--~~~~~~~~~V~~l~~s~~~~~l~s~~g~~dg~I~vw~~~s 410 (415)
+|+ .|+.|++||+.++.. +....+...|.+++|+|+|++|++ ++.|+.|++|++.+
T Consensus 465 sgs--~D~~v~lwd~~~~~~~~~~~~~h~~~v~~v~fspdg~~las--~s~d~~v~~w~~~~ 522 (611)
T 1nr0_A 465 VGG--QDSKVHVYKLSGASVSEVKTIVHPAEITSVAFSNNGAFLVA--TDQSRKVIPYSVAN 522 (611)
T ss_dssp EEE--TTSEEEEEEEETTEEEEEEEEECSSCEEEEEECTTSSEEEE--EETTSCEEEEEGGG
T ss_pred EeC--CCCeEEEEEccCCceeeeeccCCCCceEEEEECCCCCEEEE--EcCCCCEEEEEcCC
Confidence 777 899999999987653 344568889999999999999999 77899999999976
No 43
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=1.9e-32 Score=271.29 Aligned_cols=242 Identities=10% Similarity=0.231 Sum_probs=199.0
Q ss_pred CCCCcceeEeecCC-CcEEEEE-cCCeEEEEECCCCC-----------eEEeEecCCC------------CCeEEEEEcC
Q 014934 164 LQDDFYLNLVDWSS-HNVLAVG-LGNCVYLWNACSSK-----------VTKLCDLGID------------DSVCSVGWAN 218 (415)
Q Consensus 164 l~~~~~i~~l~ws~-~~~la~~-~d~~V~iwd~~~~~-----------~~~~~~~~~~------------~~V~~v~~sp 218 (415)
+.+.-.|.+++|+| +++||+| .|+.|+||++.+++ +...+. +|. +.|++++|+|
T Consensus 25 ~~~~~~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~-~h~~~~~~~~~~~~~~~V~~l~~~~ 103 (447)
T 3dw8_B 25 VAEADIISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQ-SHEPEFDYLKSLEIEEKINKIRWLP 103 (447)
T ss_dssp CCGGGSEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEE-CCCCEEEGGGTEEECCCCCEEEECC
T ss_pred ccccCcEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccc-cccccccccccccccCceEEEEEcC
Confidence 44456799999999 7788877 58999999998876 344454 787 8899999999
Q ss_pred CC--CeEEEEECCCcEEEEECCCCeee---------------------------------------EE-ecCCCccEEEE
Q 014934 219 RN--THLAVGTSHGKVQIWDASRCKRV---------------------------------------RT-MEGHRLRVGAL 256 (415)
Q Consensus 219 ~g--~~la~g~~dg~V~iwd~~~~~~~---------------------------------------~~-l~~h~~~V~~l 256 (415)
++ .+|++|+.||.|++||+.+++.. .. ..+|...|.++
T Consensus 104 ~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~ 183 (447)
T 3dw8_B 104 QKNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSI 183 (447)
T ss_dssp CCSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEE
T ss_pred CCCcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEE
Confidence 98 79999999999999998764432 12 36899999999
Q ss_pred Eee--CCEEEEEeCCCcEEEEECCCCCccEE-------EeccccCCeEEEEEeCCC-CEEEEEeCCCcEEEEECCCCce-
Q 014934 257 AWS--SSLLSSGSRDKSILQRDIRAQEDFVS-------KLSGHKSEVCGLKWSYDN-RELASGGNDNRLFVWNQHSTQP- 325 (415)
Q Consensus 257 ~~~--~~~l~sgs~dg~I~iwd~~~~~~~~~-------~~~~h~~~V~~l~~spdg-~~lasg~~dg~I~iwd~~~~~~- 325 (415)
+|+ +.+|++| .|+.|++||++....... .+.+|...|.+++|+|++ ++|++|+.||.|++||+++++.
T Consensus 184 ~~~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~ 262 (447)
T 3dw8_B 184 SINSDYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALC 262 (447)
T ss_dssp EECTTSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSS
T ss_pred EEcCCCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCccc
Confidence 998 4788988 899999999985443344 256899999999999998 9999999999999999999886
Q ss_pred ---eEEeccCCC------------cEEEEEEcCCCCcEEEEEcCCCCCeEEEEECCC-CcEEEEeeCCCC----------
Q 014934 326 ---VLKYCEHTA------------AVKAIAWSPHLHGLLASGGGTADRCIRFWNTTT-NTHLSCMDTGSQ---------- 379 (415)
Q Consensus 326 ---~~~~~~h~~------------~V~~l~~sp~~~~llasggg~~d~~I~iwd~~t-~~~~~~~~~~~~---------- 379 (415)
+..+..|.. .|.+++|+|++. +|++++ . +.|++||+.+ ++++..+.....
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~-~l~~~~--~-~~v~iwd~~~~~~~~~~~~~~~~~~~~l~~~~~ 338 (447)
T 3dw8_B 263 DRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGR-YMMTRD--Y-LSVKVWDLNMENRPVETYQVHEYLRSKLCSLYE 338 (447)
T ss_dssp CTTCEEECCC-----CCHHHHHTTCEEEEEECTTSS-EEEEEE--S-SEEEEEETTCCSSCSCCEESCGGGTTTHHHHHH
T ss_pred cceeeEeccCCCccccccccccCceEEEEEECCCCC-EEEEee--C-CeEEEEeCCCCccccceeecccccccccccccc
Confidence 788888876 899999999987 666775 5 9999999997 887777764432
Q ss_pred ------EEEEEECCCCCeEEEEEecCCCcEEEEECCCCcc
Q 014934 380 ------VCNLVWSKNVNELVSTHGYSQNQIIVWRYPTMSK 413 (415)
Q Consensus 380 ------V~~l~~s~~~~~l~s~~g~~dg~I~vw~~~s~~~ 413 (415)
+..++|+|++++|++ |+.||.|++||+.+.+.
T Consensus 339 ~~~i~~~~~~~~s~~~~~l~s--~s~dg~v~iwd~~~~~~ 376 (447)
T 3dw8_B 339 NDCIFDKFECCWNGSDSVVMT--GSYNNFFRMFDRNTKRD 376 (447)
T ss_dssp TSGGGCCCCEEECTTSSEEEE--ECSTTEEEEEETTTCCE
T ss_pred ccccccceEEEECCCCCEEEE--eccCCEEEEEEcCCCcc
Confidence 334999999999988 88999999999988654
No 44
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=2e-33 Score=272.60 Aligned_cols=233 Identities=18% Similarity=0.260 Sum_probs=190.0
Q ss_pred ceeEeecCC-CcEEEEE-cCCeEEEEECCCC--CeEEeEecCCCCCeEEEEEcCCCCeEEEEECCCcEEEEECCCCe---
Q 014934 169 YLNLVDWSS-HNVLAVG-LGNCVYLWNACSS--KVTKLCDLGIDDSVCSVGWANRNTHLAVGTSHGKVQIWDASRCK--- 241 (415)
Q Consensus 169 ~i~~l~ws~-~~~la~~-~d~~V~iwd~~~~--~~~~~~~~~~~~~V~~v~~sp~g~~la~g~~dg~V~iwd~~~~~--- 241 (415)
.|++++|+| +++|+++ .|+.|++|++.++ +....+. +|...|++++|+|++++|++|+.||.|++||+.+++
T Consensus 13 ~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~-~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~~~~~~ 91 (377)
T 3dwl_C 13 PSYEHAFNSQRTEFVTTTATNQVELYEQDGNGWKHARTFS-DHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKRPDGTWK 91 (377)
T ss_dssp CCSCCEECSSSSEEECCCSSSCBCEEEEETTEEEECCCBC-CCSSCEEEEEECTTTCCEEEEETTSSEEEC------CCC
T ss_pred cEEEEEECCCCCEEEEecCCCEEEEEEccCCceEEEEEEe-cCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcCCCCcee
Confidence 588999999 7788888 6899999999988 4444443 789999999999999999999999999999999876
Q ss_pred eeEEecCCCccEEEEEee--CCEEEEEeCCCcEEEEECCCCCc--cEEEecc-ccCCeEEEEEeCCCCEEEEEeCCCcEE
Q 014934 242 RVRTMEGHRLRVGALAWS--SSLLSSGSRDKSILQRDIRAQED--FVSKLSG-HKSEVCGLKWSYDNRELASGGNDNRLF 316 (415)
Q Consensus 242 ~~~~l~~h~~~V~~l~~~--~~~l~sgs~dg~I~iwd~~~~~~--~~~~~~~-h~~~V~~l~~spdg~~lasg~~dg~I~ 316 (415)
....+.+|...|.+++|+ +++|++|+.|+.|++||++.... ....+.+ |...|.+++|+|++++|++|+.|+.|+
T Consensus 92 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~ 171 (377)
T 3dwl_C 92 QTLVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAGCADRKAY 171 (377)
T ss_dssp CEEECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEEEESSSCEE
T ss_pred eeeEecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEEEeCCCEEE
Confidence 677788899999999998 57999999999999999988753 3566666 999999999999999999999999999
Q ss_pred EEECC------------------CCceeEEeccCCCcEEEEEEcCCCCcEEEEEcCCCCCeEEEEECCCCcE----EEEe
Q 014934 317 VWNQH------------------STQPVLKYCEHTAAVKAIAWSPHLHGLLASGGGTADRCIRFWNTTTNTH----LSCM 374 (415)
Q Consensus 317 iwd~~------------------~~~~~~~~~~h~~~V~~l~~sp~~~~llasggg~~d~~I~iwd~~t~~~----~~~~ 374 (415)
+||+. .++++..+ +|...|.+++|+|+++ +|++++ .|+.|++||+.+++. +..+
T Consensus 172 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~sp~~~-~l~~~~--~d~~i~iwd~~~~~~~~~~~~~~ 247 (377)
T 3dwl_C 172 VLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWVHAVGFSPSGN-ALAYAG--HDSSVTIAYPSAPEQPPRALITV 247 (377)
T ss_dssp EEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSEEEEEECTTSS-CEEEEE--TTTEEC-CEECSTTSCEEECCCE
T ss_pred EEEEEecccCCCccccccccccchhhhhhcc-cCCceEEEEEECCCCC-EEEEEe--CCCcEEEEECCCCCCcceeeEee
Confidence 99985 34566666 8999999999999998 566665 799999999999887 5555
Q ss_pred e-CCCCEEEEEECCCCCeEEEEEecCCCcEEEEECC
Q 014934 375 D-TGSQVCNLVWSKNVNELVSTHGYSQNQIIVWRYP 409 (415)
Q Consensus 375 ~-~~~~V~~l~~s~~~~~l~s~~g~~dg~I~vw~~~ 409 (415)
. +...|.+++|+|++++|++ |+.+ .+.+|+..
T Consensus 248 ~~~~~~v~~~~~s~~~~~l~~--~~~~-~~~~~~~~ 280 (377)
T 3dwl_C 248 KLSQLPLRSLLWANESAIVAA--GYNY-SPILLQGN 280 (377)
T ss_dssp ECSSSCEEEEEEEETTEEEEE--ESSS-SEEEECCC
T ss_pred cCCCCceEEEEEcCCCCEEEE--EcCC-cEEEEEeC
Confidence 4 6678999999999998887 6555 55577765
No 45
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=4.6e-31 Score=259.29 Aligned_cols=241 Identities=23% Similarity=0.404 Sum_probs=206.2
Q ss_pred CCcceeEeecCC-CcEEEEE-cCCeEEEEECCCCCeEEeEecCCCCCeEEEEEcCCCCeEEEEECCCcEEEEECC-CCee
Q 014934 166 DDFYLNLVDWSS-HNVLAVG-LGNCVYLWNACSSKVTKLCDLGIDDSVCSVGWANRNTHLAVGTSHGKVQIWDAS-RCKR 242 (415)
Q Consensus 166 ~~~~i~~l~ws~-~~~la~~-~d~~V~iwd~~~~~~~~~~~~~~~~~V~~v~~sp~g~~la~g~~dg~V~iwd~~-~~~~ 242 (415)
....|.+++|+| +++|+++ .++.|++||+.+++....+. +|...|.+++| ++.+|++|+.||.|++||+. ....
T Consensus 133 ~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~-~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~ 209 (401)
T 4aez_A 133 ESTYVASVKWSHDGSFLSVGLGNGLVDIYDVESQTKLRTMA-GHQARVGCLSW--NRHVLSSGSRSGAIHHHDVRIANHQ 209 (401)
T ss_dssp TTCCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEEC-CCSSCEEEEEE--ETTEEEEEETTSEEEEEETTSSSCE
T ss_pred CCCCEEEEEECCCCCEEEEECCCCeEEEEECcCCeEEEEec-CCCCceEEEEE--CCCEEEEEcCCCCEEEEecccCcce
Confidence 355799999999 6777777 58999999999999888776 88999999999 56799999999999999998 5667
Q ss_pred eEEecCCCccEEEEEee--CCEEEEEeCCCcEEEEECCCCCccEEEeccccCCeEEEEEeCCC-CEEEEEe--CCCcEEE
Q 014934 243 VRTMEGHRLRVGALAWS--SSLLSSGSRDKSILQRDIRAQEDFVSKLSGHKSEVCGLKWSYDN-RELASGG--NDNRLFV 317 (415)
Q Consensus 243 ~~~l~~h~~~V~~l~~~--~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~spdg-~~lasg~--~dg~I~i 317 (415)
+..+.+|...|.+++|+ +.+|++|+.||.|++||++... ....+..|...|.+++|+|++ .++++|+ .|+.|++
T Consensus 210 ~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~-~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i 288 (401)
T 4aez_A 210 IGTLQGHSSEVCGLAWRSDGLQLASGGNDNVVQIWDARSSI-PKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHF 288 (401)
T ss_dssp EEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCSS-EEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEE
T ss_pred eeEEcCCCCCeeEEEEcCCCCEEEEEeCCCeEEEccCCCCC-ccEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEE
Confidence 88889999999999998 5799999999999999999876 577788999999999999976 5666665 7999999
Q ss_pred EECCCCceeEEeccCCCcEEEEEEcCCCCcEEEEEcCCCCCeEEEEECCCCcEEEEe---eCCCCEEEEEECCCCCeEEE
Q 014934 318 WNQHSTQPVLKYCEHTAAVKAIAWSPHLHGLLASGGGTADRCIRFWNTTTNTHLSCM---DTGSQVCNLVWSKNVNELVS 394 (415)
Q Consensus 318 wd~~~~~~~~~~~~h~~~V~~l~~sp~~~~llasggg~~d~~I~iwd~~t~~~~~~~---~~~~~V~~l~~s~~~~~l~s 394 (415)
||+.+++++..+ .|...|.+++|+|++..+++++ |..|+.|++||+.+++..... .+...|.+++|+|++++|++
T Consensus 289 ~d~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~~~~-g~~dg~i~v~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s 366 (401)
T 4aez_A 289 WNAATGARVNTV-DAGSQVTSLIWSPHSKEIMSTH-GFPDNNLSIWSYSSSGLTKQVDIPAHDTRVLYSALSPDGRILST 366 (401)
T ss_dssp EETTTCCEEEEE-ECSSCEEEEEECSSSSEEEEEE-CTTTCEEEEEEEETTEEEEEEEEECCSSCCCEEEECTTSSEEEE
T ss_pred EECCCCCEEEEE-eCCCcEEEEEECCCCCeEEEEe-ecCCCcEEEEecCCccceeEEEecCCCCCEEEEEECCCCCEEEE
Confidence 999999999888 4677899999999998555553 447999999999997665543 36788999999999999999
Q ss_pred EEecCCCcEEEEECCCCccc
Q 014934 395 THGYSQNQIIVWRYPTMSKV 414 (415)
Q Consensus 395 ~~g~~dg~I~vw~~~s~~~l 414 (415)
++.||.|++|++.+.+.+
T Consensus 367 --~~~dg~i~iw~~~~~~~~ 384 (401)
T 4aez_A 367 --AASDENLKFWRVYDGDHV 384 (401)
T ss_dssp --ECTTSEEEEEECCC----
T ss_pred --EeCCCcEEEEECCCCccc
Confidence 788999999999887653
No 46
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=7.5e-33 Score=281.49 Aligned_cols=238 Identities=10% Similarity=0.140 Sum_probs=196.2
Q ss_pred cceeEeecCC-C---------cEEEEE--------------------cCCeEEEEECCCCCeEE--eE-ecCCCCCeEEE
Q 014934 168 FYLNLVDWSS-H---------NVLAVG--------------------LGNCVYLWNACSSKVTK--LC-DLGIDDSVCSV 214 (415)
Q Consensus 168 ~~i~~l~ws~-~---------~~la~~--------------------~d~~V~iwd~~~~~~~~--~~-~~~~~~~V~~v 214 (415)
..|.+|+|+| + ++||++ .|++|+||++.+++... .. ...|.+.|.+|
T Consensus 134 ~~V~sv~w~p~~~~~~~~~~~~~LAv~~~~~~~~~~~~~~~~laS~s~D~tI~iWd~~~~~~~~~~~~~l~~~~~~V~~v 213 (524)
T 2j04_B 134 GLVTDIAWLNIEENTDIGKDIQYLAVAVSQYMDEPLNEHLEMFDKEKHSSCIQIFKMNTSTLHCVKVQTIVHSFGEVWDL 213 (524)
T ss_dssp C--CCCSCEEECCCCSSCSSEEEEEEEEEC------------------CEEEEEEEEETTTCCEEEEEEEEECCCSEEEE
T ss_pred CceeEEEecccCCCCccCcCCeEEEEEEecccCCccchhhhhhccCCCCceEEEEEccCCCCCceEEEEEEecCCcEEEE
Confidence 3577888888 4 577764 35689999998876422 11 11567889999
Q ss_pred EEcCC------CCeEEEEECCCcEEEEECCCCee-----------eEEecCCCccEEEEEee-CCEEEEEeCCCcEEEEE
Q 014934 215 GWANR------NTHLAVGTSHGKVQIWDASRCKR-----------VRTMEGHRLRVGALAWS-SSLLSSGSRDKSILQRD 276 (415)
Q Consensus 215 ~~sp~------g~~la~g~~dg~V~iwd~~~~~~-----------~~~l~~h~~~V~~l~~~-~~~l~sgs~dg~I~iwd 276 (415)
+|+|+ +.+||+|+.||+|+|||+.+++. ...+.+|...|.+++|+ +..|++|+.||+|++||
T Consensus 214 ~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~~~lasgs~DgtV~lWD 293 (524)
T 2j04_B 214 KWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSPTTVVCGFKNGFVAEFD 293 (524)
T ss_dssp EECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESSSSEEEEEETTSEEEEEE
T ss_pred EECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecCCCeEEEEeCCCEEEEEE
Confidence 99997 57999999999999999976532 24678899999999998 57999999999999999
Q ss_pred CCCCCccEEEeccccCCeEEE--EEeCCC-CEEEEEeCCCcEEEEECCCCceeEEeccCCC--cEEEEEEcCCCCcEEEE
Q 014934 277 IRAQEDFVSKLSGHKSEVCGL--KWSYDN-RELASGGNDNRLFVWNQHSTQPVLKYCEHTA--AVKAIAWSPHLHGLLAS 351 (415)
Q Consensus 277 ~~~~~~~~~~~~~h~~~V~~l--~~spdg-~~lasg~~dg~I~iwd~~~~~~~~~~~~h~~--~V~~l~~sp~~~~llas 351 (415)
++++..+...+.+|...|.++ .|+|++ .+||+|+.|++|+|||+++++++..+.+|.. .|.+++|+|++. .+++
T Consensus 294 ~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~~~~~~~~~~~v~~v~fsp~~~-~l~s 372 (524)
T 2j04_B 294 LTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTKTTVSRFRGSNLVPVVYCPQIY-SYIY 372 (524)
T ss_dssp TTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHHHCEEEEECSCCSCCCEEEETTTT-EEEE
T ss_pred CCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCcccccccccccCcccceEeCCCcC-eEEE
Confidence 997754566788999999999 578888 8999999999999999999887777777764 588999999987 5666
Q ss_pred EcCCCCCeEEEEECCCCcEEEEe-eCCCCEEEEEECCCCCeEEEEEecCCCcEEEEECCC
Q 014934 352 GGGTADRCIRFWNTTTNTHLSCM-DTGSQVCNLVWSKNVNELVSTHGYSQNQIIVWRYPT 410 (415)
Q Consensus 352 ggg~~d~~I~iwd~~t~~~~~~~-~~~~~V~~l~~s~~~~~l~s~~g~~dg~I~vw~~~s 410 (415)
++ .|++|++||++++.++..+ .|...|.+++|+|+++.|++ |+.|++|++|++..
T Consensus 373 ~~--~d~tv~lwd~~~~~~~~~l~gH~~~V~sva~Sp~g~~l~S--gs~Dgtv~lwd~~~ 428 (524)
T 2j04_B 373 SD--GASSLRAVPSRAAFAVHPLVSRETTITAIGVSRLHPMVLA--GSADGSLIITNAAR 428 (524)
T ss_dssp EC--SSSEEEEEETTCTTCCEEEEECSSCEEEEECCSSCCBCEE--EETTTEEECCBSCS
T ss_pred eC--CCCcEEEEECcccccceeeecCCCceEEEEeCCCCCeEEE--EECCCEEEEEechH
Confidence 65 7999999999999876655 47889999999999999998 88999999999754
No 47
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=3.4e-31 Score=278.56 Aligned_cols=235 Identities=22% Similarity=0.382 Sum_probs=201.6
Q ss_pred CcceeEeecCC-CcEEEEE-cCCeEEEEECCCCCeEEeEecCCCCCeEEEEEcCCCCeEEEEECCCcEEEEECCCCeeeE
Q 014934 167 DFYLNLVDWSS-HNVLAVG-LGNCVYLWNACSSKVTKLCDLGIDDSVCSVGWANRNTHLAVGTSHGKVQIWDASRCKRVR 244 (415)
Q Consensus 167 ~~~i~~l~ws~-~~~la~~-~d~~V~iwd~~~~~~~~~~~~~~~~~V~~v~~sp~g~~la~g~~dg~V~iwd~~~~~~~~ 244 (415)
...|++++|++ +++|++| .|+.|+|||+.+++....+. +|...|.+++|+|++++|++|+.||+|+|||+.......
T Consensus 430 ~~~v~~v~~s~~g~~l~sgs~Dg~v~vwd~~~~~~~~~~~-~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~ 508 (694)
T 3dm0_A 430 SHFVEDVVLSSDGQFALSGSWDGELRLWDLAAGVSTRRFV-GHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYT 508 (694)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE-CCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEE
T ss_pred CCcEEEEEECCCCCEEEEEeCCCcEEEEECCCCcceeEEe-CCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCccee
Confidence 34689999999 6777666 58999999999998877775 899999999999999999999999999999987654433
Q ss_pred Ee---cCCCccEEEEEeeC----CEEEEEeCCCcEEEEECCCCCccEEEeccccCCeEEEEEeCCCCEEEEEeCCCcEEE
Q 014934 245 TM---EGHRLRVGALAWSS----SLLSSGSRDKSILQRDIRAQEDFVSKLSGHKSEVCGLKWSYDNRELASGGNDNRLFV 317 (415)
Q Consensus 245 ~l---~~h~~~V~~l~~~~----~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~spdg~~lasg~~dg~I~i 317 (415)
.. .+|...|.+++|++ ..|++|+.|++|++||++... ....+.+|...|.+++|+|++++|++|+.|+.|+|
T Consensus 509 ~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~-~~~~~~~h~~~v~~v~~spdg~~l~sg~~Dg~i~i 587 (694)
T 3dm0_A 509 ISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCK-LRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLL 587 (694)
T ss_dssp ECSSTTSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTCC-EEEEECCCSSCEEEEEECTTSSEEEEEETTSBCEE
T ss_pred eccCCCCCCCcEEEEEEeCCCCcceEEEEeCCCeEEEEECCCCc-EEEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEE
Confidence 32 46889999999984 479999999999999999876 67888999999999999999999999999999999
Q ss_pred EECCCCceeEEeccCCCcEEEEEEcCCCCcEEEEEcCCCCCeEEEEECCCCcEEEEeeCC--------------------
Q 014934 318 WNQHSTQPVLKYCEHTAAVKAIAWSPHLHGLLASGGGTADRCIRFWNTTTNTHLSCMDTG-------------------- 377 (415)
Q Consensus 318 wd~~~~~~~~~~~~h~~~V~~l~~sp~~~~llasggg~~d~~I~iwd~~t~~~~~~~~~~-------------------- 377 (415)
||+.+++.+..+. +...|.+++|+|++. ++++++ ++.|++||+.+++.+..+...
T Consensus 588 wd~~~~~~~~~~~-~~~~v~~~~~sp~~~-~l~~~~---~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 662 (694)
T 3dm0_A 588 WDLAEGKKLYSLE-ANSVIHALCFSPNRY-WLCAAT---EHGIKIWDLESKSIVEDLKVDLKAEAEKADNSGPAATKRKV 662 (694)
T ss_dssp EETTTTEEEECCB-CSSCEEEEEECSSSS-EEEEEE---TTEEEEEETTTTEEEEEECCCCC----------------CC
T ss_pred EECCCCceEEEec-CCCcEEEEEEcCCCc-EEEEEc---CCCEEEEECCCCCChhhhccccccccccccccccccCCcee
Confidence 9999999888774 456899999999976 666654 778999999999888766421
Q ss_pred CCEEEEEECCCCCeEEEEEecCCCcEEEEECCC
Q 014934 378 SQVCNLVWSKNVNELVSTHGYSQNQIIVWRYPT 410 (415)
Q Consensus 378 ~~V~~l~~s~~~~~l~s~~g~~dg~I~vw~~~s 410 (415)
..+++++|+|+|++|++ |+.||.|+||++..
T Consensus 663 ~~~~~l~~spdg~~l~s--gs~Dg~i~iW~i~~ 693 (694)
T 3dm0_A 663 IYCTSLNWSADGSTLFS--GYTDGVIRVWGIGR 693 (694)
T ss_dssp CCEEEEEECTTSSEEEE--EETTSEEEEEEC--
T ss_pred EEeeeEEEcCCCCEEEE--EcCCCeEEEEeccC
Confidence 13688999999999999 88999999999863
No 48
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=4.2e-32 Score=260.76 Aligned_cols=236 Identities=16% Similarity=0.253 Sum_probs=201.8
Q ss_pred CcceeEeecCCC-----cEEEEE-cCCeEEEEECCCCCeEEeEecCCCCCeEEEEEcC-CCCeEEEEECCCcEEEEECCC
Q 014934 167 DFYLNLVDWSSH-----NVLAVG-LGNCVYLWNACSSKVTKLCDLGIDDSVCSVGWAN-RNTHLAVGTSHGKVQIWDASR 239 (415)
Q Consensus 167 ~~~i~~l~ws~~-----~~la~~-~d~~V~iwd~~~~~~~~~~~~~~~~~V~~v~~sp-~g~~la~g~~dg~V~iwd~~~ 239 (415)
+..+.+++|++. .+|+++ .|+.|++||+.+++....+. +|...|.+++|+| ++.+|++|+.||.|++||+.+
T Consensus 69 ~~~v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~-~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~ 147 (366)
T 3k26_A 69 DENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQCIKHYV-GHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQT 147 (366)
T ss_dssp TCCEEEEEEEECTTTCCEEEEEEETTCEEEEECTTTCCEEEEEE-SCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTT
T ss_pred CCcEEEEEeccCCCCCCCEEEEecCCCEEEEEEchhceEeeeec-CCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeec
Confidence 346899999984 355555 68999999999999887776 7899999999999 899999999999999999999
Q ss_pred CeeeEEe---cCCCccEEEEEee--CCEEEEEeCCCcEEEEECCCCCcc---------------------------EEEe
Q 014934 240 CKRVRTM---EGHRLRVGALAWS--SSLLSSGSRDKSILQRDIRAQEDF---------------------------VSKL 287 (415)
Q Consensus 240 ~~~~~~l---~~h~~~V~~l~~~--~~~l~sgs~dg~I~iwd~~~~~~~---------------------------~~~~ 287 (415)
++.+..+ .+|...|.+++|+ +++|++++.||.|++||++..... ....
T Consensus 148 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (366)
T 3k26_A 148 DTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTR 227 (366)
T ss_dssp TEEEEEECSTTSCSSCEEEEEECTTSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEEC
T ss_pred CeEEEEecccccccCceeEEEECCCCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccc
Confidence 9999888 6899999999998 579999999999999999875411 2233
Q ss_pred ccccCCeEEEEEeCCCCEEEEEeCCCcEEEEECCCCce--------------eEEeccCCCcEEEEEEcCC--CCcEEEE
Q 014934 288 SGHKSEVCGLKWSYDNRELASGGNDNRLFVWNQHSTQP--------------VLKYCEHTAAVKAIAWSPH--LHGLLAS 351 (415)
Q Consensus 288 ~~h~~~V~~l~~spdg~~lasg~~dg~I~iwd~~~~~~--------------~~~~~~h~~~V~~l~~sp~--~~~llas 351 (415)
.+|...|.+++|+ +++|++++.|+.|++||+.++.. +..+..|...|.+++|+|+ +. +|++
T Consensus 228 ~~~~~~v~~~~~~--~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~-~l~~ 304 (366)
T 3k26_A 228 DIHRNYVDCVRWL--GDLILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQK-MLAL 304 (366)
T ss_dssp SSCSSCCCEEEEE--TTEEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSS-EEEE
T ss_pred cCCcceEEEEEEc--CCEEEEEecCCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCCCCCc-EEEE
Confidence 3499999999999 77999999999999999987644 7788899999999999999 76 7777
Q ss_pred EcCCCCCeEEEEECCCCcE----EEEee-C--CCCEEEEEECCCCCeEEEEEecCCCcEEEEECCC
Q 014934 352 GGGTADRCIRFWNTTTNTH----LSCMD-T--GSQVCNLVWSKNVNELVSTHGYSQNQIIVWRYPT 410 (415)
Q Consensus 352 ggg~~d~~I~iwd~~t~~~----~~~~~-~--~~~V~~l~~s~~~~~l~s~~g~~dg~I~vw~~~s 410 (415)
++ .|+.|++||+.+++. ...+. + ...|.+++|+|++++|++ ++.||.|++||+.+
T Consensus 305 ~~--~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s--~~~dg~i~iwd~~~ 366 (366)
T 3k26_A 305 GN--QVGKLYVWDLEVEDPHKAKCTTLTHHKCGAAIRQTSFSRDSSILIA--VCDDASIWRWDRLR 366 (366)
T ss_dssp EC--TTSCEEEEECCSSSGGGCEEEEECCTTCCSCEEEEEECTTSSEEEE--EETTSEEEEEEC--
T ss_pred Ee--cCCcEEEEECCCCCCccccceEEcccccCCceEEEEeCCCCCeEEE--EeCCCEEEEEEecC
Confidence 76 899999999998863 33444 3 588999999999999999 77999999999863
No 49
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=3.3e-32 Score=267.65 Aligned_cols=236 Identities=15% Similarity=0.181 Sum_probs=200.2
Q ss_pred eeEeecCC-CcEEEE-EcCCeEEEEECCCCCeEEeEecCCCCCeEEEEEcCCCCeEEEEECCCcEEEEECCCCeeeEEec
Q 014934 170 LNLVDWSS-HNVLAV-GLGNCVYLWNACSSKVTKLCDLGIDDSVCSVGWANRNTHLAVGTSHGKVQIWDASRCKRVRTME 247 (415)
Q Consensus 170 i~~l~ws~-~~~la~-~~d~~V~iwd~~~~~~~~~~~~~~~~~V~~v~~sp~g~~la~g~~dg~V~iwd~~~~~~~~~l~ 247 (415)
++.++|+| ++.|++ +.++.|++||..+++....+. .+ ..+....|++++++||+|+.||.|++||+.+++.+..+.
T Consensus 59 ~~~~~~s~~g~~l~~~~~d~~v~i~d~~~~~~~~~~~-~~-~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~ 136 (420)
T 3vl1_A 59 GKGNTFEKVGSHLYKARLDGHDFLFNTIIRDGSKMLK-RA-DYTAVDTAKLQMRRFILGTTEGDIKVLDSNFNLQREIDQ 136 (420)
T ss_dssp CTTCEEEEEETTEEEEEETTEEEEEECCSEETTTTSC-SC-CEEEEEEECSSSCEEEEEETTSCEEEECTTSCEEEEETT
T ss_pred ccceeeeecCCeEEEEEcCCcEEEEEecccceeeEEe-cC-CceEEEEEecCCCEEEEEECCCCEEEEeCCCcceeeecc
Confidence 44678998 554544 478999999998876554443 22 455666789999999999999999999999999998889
Q ss_pred CCCccEEEEEee--CCEEEEEeCCCcEEEEECCCCCccEEEeccccCCeEEEEEeCCCCEEEEEeCCCcEEEEECCCCce
Q 014934 248 GHRLRVGALAWS--SSLLSSGSRDKSILQRDIRAQEDFVSKLSGHKSEVCGLKWSYDNRELASGGNDNRLFVWNQHSTQP 325 (415)
Q Consensus 248 ~h~~~V~~l~~~--~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~spdg~~lasg~~dg~I~iwd~~~~~~ 325 (415)
+|...|.+++|+ +.+|++|+.|+.|++||++++. .+..+.+|...|.+++|+|++++|++|+.|+.|++||+++++.
T Consensus 137 ~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~-~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~ 215 (420)
T 3vl1_A 137 AHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGS-NPRTLIGHRATVTDIAIIDRGRNVLSASLDGTIRLWECGTGTT 215 (420)
T ss_dssp SSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCC-CCEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEE
T ss_pred cccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCc-CceEEcCCCCcEEEEEEcCCCCEEEEEcCCCcEEEeECCCCce
Confidence 999999999998 4799999999999999999887 5677889999999999999999999999999999999999999
Q ss_pred eEEecc---CCCcEEEEEE---------------------cCCCCcEEEEEcCCCCCeEEEEECCCCcEEEEee--CCCC
Q 014934 326 VLKYCE---HTAAVKAIAW---------------------SPHLHGLLASGGGTADRCIRFWNTTTNTHLSCMD--TGSQ 379 (415)
Q Consensus 326 ~~~~~~---h~~~V~~l~~---------------------sp~~~~llasggg~~d~~I~iwd~~t~~~~~~~~--~~~~ 379 (415)
+..+.. |...|.+++| +|++. ++++++ .|+.|++||+.+++.+..+. +...
T Consensus 216 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~~~~--~dg~i~i~d~~~~~~~~~~~~~~~~~ 292 (420)
T 3vl1_A 216 IHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGK-YVIAGH--VSGVITVHNVFSKEQTIQLPSKFTCS 292 (420)
T ss_dssp EEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTE-EEEEEE--TTSCEEEEETTTCCEEEEECCTTSSC
T ss_pred eEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCC-EEEEEc--CCCeEEEEECCCCceeEEcccccCCC
Confidence 988874 4455555555 67776 666666 79999999999999887775 4578
Q ss_pred EEEEEECCCCC-eEEEEEecCCCcEEEEECCCCcc
Q 014934 380 VCNLVWSKNVN-ELVSTHGYSQNQIIVWRYPTMSK 413 (415)
Q Consensus 380 V~~l~~s~~~~-~l~s~~g~~dg~I~vw~~~s~~~ 413 (415)
|.+++|+|++. +|++ |+.||.|++||+.+.++
T Consensus 293 v~~~~~~~~~~~~l~~--g~~dg~i~vwd~~~~~~ 325 (420)
T 3vl1_A 293 CNSLTVDGNNANYIYA--GYENGMLAQWDLRSPEC 325 (420)
T ss_dssp EEEEEECSSCTTEEEE--EETTSEEEEEETTCTTS
T ss_pred ceeEEEeCCCCCEEEE--EeCCCeEEEEEcCCCcC
Confidence 99999999999 7777 78999999999998754
No 50
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=9.8e-31 Score=249.09 Aligned_cols=239 Identities=21% Similarity=0.331 Sum_probs=209.3
Q ss_pred CcceeEeecCC--CcEEEEE-cCCeEEEEECCCCCe-----EEeEecCCCCCeEEEEEcCCCCeEEEEECCCcEEEEECC
Q 014934 167 DFYLNLVDWSS--HNVLAVG-LGNCVYLWNACSSKV-----TKLCDLGIDDSVCSVGWANRNTHLAVGTSHGKVQIWDAS 238 (415)
Q Consensus 167 ~~~i~~l~ws~--~~~la~~-~d~~V~iwd~~~~~~-----~~~~~~~~~~~V~~v~~sp~g~~la~g~~dg~V~iwd~~ 238 (415)
.-.|++|+|+| +++|++| .|++|+|||+.+.+. ...+. +|...|.+++|+|+|++|++|+.||.|++|+..
T Consensus 38 ~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~-~h~~~V~~~~~s~dg~~l~s~~~d~~i~~~~~~ 116 (340)
T 4aow_A 38 NGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALR-GHSHFVSDVVISSDGQFALSGSWDGTLRLWDLT 116 (340)
T ss_dssp SSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEEC-CCSSCEEEEEECTTSSEEEEEETTSEEEEEETT
T ss_pred cCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEe-CCCCCEEEEEECCCCCEEEEEcccccceEEeec
Confidence 34699999998 4677765 689999999877542 22332 789999999999999999999999999999999
Q ss_pred CCeeeEEecCCCccEEEEEee--CCEEEEEeCCCcEEEEECCCCCccEEEeccccCCeEEEEEeCCC--CEEEEEeCCCc
Q 014934 239 RCKRVRTMEGHRLRVGALAWS--SSLLSSGSRDKSILQRDIRAQEDFVSKLSGHKSEVCGLKWSYDN--RELASGGNDNR 314 (415)
Q Consensus 239 ~~~~~~~l~~h~~~V~~l~~~--~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~spdg--~~lasg~~dg~ 314 (415)
..........+...+..+.+. +.+|++|+.|+.+++||+...........+|...|..++|++++ .++++++.|+.
T Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~~d~~ 196 (340)
T 4aow_A 117 TGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKL 196 (340)
T ss_dssp TTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSSCSSCEEEEEECSCSSSCEEEEEETTSC
T ss_pred ccceeeeecCCCCceeEEEEeecCccceeecCCCeEEEEEeCCCceEEEEeccccCcccceEEccCCCCcEEEEEcCCCE
Confidence 998888888888889888887 57999999999999999988776566677899999999999764 57899999999
Q ss_pred EEEEECCCCceeEEeccCCCcEEEEEEcCCCCcEEEEEcCCCCCeEEEEECCCCcEEEEeeCCCCEEEEEECCCCCeEEE
Q 014934 315 LFVWNQHSTQPVLKYCEHTAAVKAIAWSPHLHGLLASGGGTADRCIRFWNTTTNTHLSCMDTGSQVCNLVWSKNVNELVS 394 (415)
Q Consensus 315 I~iwd~~~~~~~~~~~~h~~~V~~l~~sp~~~~llasggg~~d~~I~iwd~~t~~~~~~~~~~~~V~~l~~s~~~~~l~s 394 (415)
|++||+++++.+..+.+|...|.+++|+|+++ +|++++ .|+.|++||+.+++.+..+.+...|..+.|+|++..+++
T Consensus 197 i~i~d~~~~~~~~~~~~h~~~v~~~~~s~~~~-~l~s~s--~Dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 273 (340)
T 4aow_A 197 VKVWNLANCKLKTNHIGHTGYLNTVTVSPDGS-LCASGG--KDGQAMLWDLNEGKHLYTLDGGDIINALCFSPNRYWLCA 273 (340)
T ss_dssp EEEEETTTTEEEEEECCCSSCEEEEEECTTSS-EEEEEE--TTCEEEEEETTTTEEEEEEECSSCEEEEEECSSSSEEEE
T ss_pred EEEEECCCCceeeEecCCCCcEEEEEECCCCC-EEEEEe--CCCeEEEEEeccCceeeeecCCceEEeeecCCCCceeec
Confidence 99999999999999999999999999999987 777776 899999999999999999999999999999999876654
Q ss_pred EEecCCCcEEEEECCCCc
Q 014934 395 THGYSQNQIIVWRYPTMS 412 (415)
Q Consensus 395 ~~g~~dg~I~vw~~~s~~ 412 (415)
+.|+.|++||+++..
T Consensus 274 ---~~d~~i~iwd~~~~~ 288 (340)
T 4aow_A 274 ---ATGPSIKIWDLEGKI 288 (340)
T ss_dssp ---EETTEEEEEETTTTE
T ss_pred ---cCCCEEEEEECCCCe
Confidence 468999999998754
No 51
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=9e-32 Score=264.54 Aligned_cols=235 Identities=12% Similarity=0.134 Sum_probs=198.1
Q ss_pred eeEeecCC-CcEEEEE-cCCeEEEEECCCCCeEEeEecCCCCCeEEEEEcCCCCeEEEEECCCcEEEEECCCCeeeEEec
Q 014934 170 LNLVDWSS-HNVLAVG-LGNCVYLWNACSSKVTKLCDLGIDDSVCSVGWANRNTHLAVGTSHGKVQIWDASRCKRVRTME 247 (415)
Q Consensus 170 i~~l~ws~-~~~la~~-~d~~V~iwd~~~~~~~~~~~~~~~~~V~~v~~sp~g~~la~g~~dg~V~iwd~~~~~~~~~l~ 247 (415)
+.+..|++ +++|+++ .++.|++||+.+++....+. +|...|++++|+|++++|++|+.||.|++||+.+++.+..+.
T Consensus 100 ~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~-~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~ 178 (420)
T 3vl1_A 100 TAVDTAKLQMRRFILGTTEGDIKVLDSNFNLQREIDQ-AHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPRTLI 178 (420)
T ss_dssp EEEEEECSSSCEEEEEETTSCEEEECTTSCEEEEETT-SSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCCCEEEE
T ss_pred eEEEEEecCCCEEEEEECCCCEEEEeCCCcceeeecc-cccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCceEEc
Confidence 44556777 6677776 67899999999888766554 789999999999999999999999999999999999999999
Q ss_pred CCCccEEEEEee--CCEEEEEeCCCcEEEEECCCCCccEEEecc---ccCCeE---------------------EEEEeC
Q 014934 248 GHRLRVGALAWS--SSLLSSGSRDKSILQRDIRAQEDFVSKLSG---HKSEVC---------------------GLKWSY 301 (415)
Q Consensus 248 ~h~~~V~~l~~~--~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~---h~~~V~---------------------~l~~sp 301 (415)
+|...|.+++|+ +.+|++|+.||.|++||++++. .+..+.. |...|. +++|+|
T Consensus 179 ~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~ 257 (420)
T 3vl1_A 179 GHRATVTDIAIIDRGRNVLSASLDGTIRLWECGTGT-TIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGT 257 (420)
T ss_dssp CCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTE-EEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSC
T ss_pred CCCCcEEEEEEcCCCCEEEEEcCCCcEEEeECCCCc-eeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcC
Confidence 999999999998 5799999999999999999876 4555553 334444 455578
Q ss_pred CCCEEEEEeCCCcEEEEECCCCceeEEec-cCCCcEEEEEEcCCCCcEEEEEcCCCCCeEEEEECCCCcE-EEEee--CC
Q 014934 302 DNRELASGGNDNRLFVWNQHSTQPVLKYC-EHTAAVKAIAWSPHLHGLLASGGGTADRCIRFWNTTTNTH-LSCMD--TG 377 (415)
Q Consensus 302 dg~~lasg~~dg~I~iwd~~~~~~~~~~~-~h~~~V~~l~~sp~~~~llasggg~~d~~I~iwd~~t~~~-~~~~~--~~ 377 (415)
++++|++|+.||.|++||+++++.+..+. .|...|.+++|+|++..+|++++ .|+.|++||+.+++. +..+. +.
T Consensus 258 ~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~--~dg~i~vwd~~~~~~~~~~~~~~~~ 335 (420)
T 3vl1_A 258 YGKYVIAGHVSGVITVHNVFSKEQTIQLPSKFTCSCNSLTVDGNNANYIYAGY--ENGMLAQWDLRSPECPVGEFLINEG 335 (420)
T ss_dssp TTEEEEEEETTSCEEEEETTTCCEEEEECCTTSSCEEEEEECSSCTTEEEEEE--TTSEEEEEETTCTTSCSEEEEESTT
T ss_pred CCCEEEEEcCCCeEEEEECCCCceeEEcccccCCCceeEEEeCCCCCEEEEEe--CCCeEEEEEcCCCcCchhhhhccCC
Confidence 99999999999999999999998877775 58899999999999987888887 899999999998754 55554 56
Q ss_pred CCEEEEEECCCCCeEEEEEecCCCcEEEEECCCC
Q 014934 378 SQVCNLVWSKNVNELVSTHGYSQNQIIVWRYPTM 411 (415)
Q Consensus 378 ~~V~~l~~s~~~~~l~s~~g~~dg~I~vw~~~s~ 411 (415)
..|..+.| ++++.|++ ++.|+.|++|++...
T Consensus 336 ~~v~~~~~-~~~~~l~s--~~~d~~v~iw~~~~~ 366 (420)
T 3vl1_A 336 TPINNVYF-AAGALFVS--SGFDTSIKLDIISDP 366 (420)
T ss_dssp SCEEEEEE-ETTEEEEE--ETTTEEEEEEEECCT
T ss_pred CCceEEEe-CCCCEEEE--ecCCccEEEEeccCC
Confidence 77888855 47778888 789999999998764
No 52
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=5.8e-32 Score=259.13 Aligned_cols=242 Identities=17% Similarity=0.314 Sum_probs=200.5
Q ss_pred CcceeEeecCCC----cEEEEE-cCCeEEEEECCCCC-eEEeEecCCCCCeEEEEE------cCCCCeEEEEECCCcEEE
Q 014934 167 DFYLNLVDWSSH----NVLAVG-LGNCVYLWNACSSK-VTKLCDLGIDDSVCSVGW------ANRNTHLAVGTSHGKVQI 234 (415)
Q Consensus 167 ~~~i~~l~ws~~----~~la~~-~d~~V~iwd~~~~~-~~~~~~~~~~~~V~~v~~------sp~g~~la~g~~dg~V~i 234 (415)
...|.+++|+|. ++|+++ .++.|++||+.+++ ....+. +|...|.++.| +|++++|++|+.||.|++
T Consensus 65 ~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~v 143 (357)
T 3i2n_A 65 AKPIKCGTFGATSLQQRYLATGDFGGNLHIWNLEAPEMPVYSVK-GHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKV 143 (357)
T ss_dssp SSCEEEEECTTCCTTTCCEEEEETTSCEEEECTTSCSSCSEEEC-CCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEE
T ss_pred cCcEEEEEEcCCCCCCceEEEecCCCeEEEEeCCCCCccEEEEE-ecccceEEEeeccccccCCCccEEEEEeCCCeEEE
Confidence 346899999994 777766 58999999999887 555554 78999999954 689999999999999999
Q ss_pred EECCCCe-eeEEecCCCc----cEEEEEe----e--CCEEEEEeCCCcEEEEECCCCCccEEEeccccCCeEEEEEeC--
Q 014934 235 WDASRCK-RVRTMEGHRL----RVGALAW----S--SSLLSSGSRDKSILQRDIRAQEDFVSKLSGHKSEVCGLKWSY-- 301 (415)
Q Consensus 235 wd~~~~~-~~~~l~~h~~----~V~~l~~----~--~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~sp-- 301 (415)
||+.+++ .+..+..|.+ .|.+++| + +.+|++|+.||.|++||++.... .....|...|.+++|+|
T Consensus 144 wd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~--~~~~~~~~~v~~~~~~~~~ 221 (357)
T 3i2n_A 144 WDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMAL--RWETNIKNGVCSLEFDRKD 221 (357)
T ss_dssp ECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTEE--EEEEECSSCEEEEEESCSS
T ss_pred EeCCCCCCcceeccccCCCCCCceEEEEEEeccCCCCCEEEEEccCCeEEEEECccCce--eeecCCCCceEEEEcCCCC
Confidence 9999886 6777766554 8999984 4 68999999999999999998763 44567889999999999
Q ss_pred -CCCEEEEEeCCCcEEEEECCCCceeEEec-----cCCCcEEEEEEcCCCCcEEEEEcCCCCCeEEEEECCCCc------
Q 014934 302 -DNRELASGGNDNRLFVWNQHSTQPVLKYC-----EHTAAVKAIAWSPHLHGLLASGGGTADRCIRFWNTTTNT------ 369 (415)
Q Consensus 302 -dg~~lasg~~dg~I~iwd~~~~~~~~~~~-----~h~~~V~~l~~sp~~~~llasggg~~d~~I~iwd~~t~~------ 369 (415)
++++|++|+.||.|++||+++++.+..+. +|...|.+++|+|++..++++++ .|+.|++||+.++.
T Consensus 222 ~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~--~dg~i~iwd~~~~~~~~~~~ 299 (357)
T 3i2n_A 222 ISMNKLVATSLEGKFHVFDMRTQHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAG--GAGGLHLWKYEYPIQRSKKD 299 (357)
T ss_dssp SSCCEEEEEESTTEEEEEEEEEEETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEE--TTSEEEEEEEECCSCC--CC
T ss_pred CCCCEEEEECCCCeEEEEeCcCCCcccceeeeccCCCcCCEEEEEECCCCCcEEEEEe--CCCcEEEeecCCCccccccc
Confidence 99999999999999999998876655444 89999999999999887888887 89999999998643
Q ss_pred -------------EEEEee-CCCCEEEEEECCCCCeEEEEEecCCCcEEEEECCCCccc
Q 014934 370 -------------HLSCMD-TGSQVCNLVWSKNVNELVSTHGYSQNQIIVWRYPTMSKV 414 (415)
Q Consensus 370 -------------~~~~~~-~~~~V~~l~~s~~~~~l~s~~g~~dg~I~vw~~~s~~~l 414 (415)
.+..+. +...|.+++|+|+++.|+++ |+.|+.|+||++.++++|
T Consensus 300 ~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~s-~~~d~~i~iw~~~~~~~i 357 (357)
T 3i2n_A 300 SEGIEMGVAGSVSLLQNVTLSTQPISSLDWSPDKRGLCVC-SSFDQTVRVLIVTKLNKI 357 (357)
T ss_dssp TTSCCCCCCCEEEEEEEEECCSSCEEEEEECSSSTTEEEE-EETTSEEEEEEECC----
T ss_pred CCCCccccccccceeeccccCCCCeeEEEEcCCCCeEEEE-ecCCCcEEEEECCCcccC
Confidence 344444 67789999999999999833 678999999999988764
No 53
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=7.7e-31 Score=261.84 Aligned_cols=238 Identities=19% Similarity=0.312 Sum_probs=212.7
Q ss_pred CcceeEeecCCCcEEEEE-cCCeEEEEECCCCCeEEeEecCCCCCeEEEEEc--CCCCeEEEEECCCcEEEEECCCCe--
Q 014934 167 DFYLNLVDWSSHNVLAVG-LGNCVYLWNACSSKVTKLCDLGIDDSVCSVGWA--NRNTHLAVGTSHGKVQIWDASRCK-- 241 (415)
Q Consensus 167 ~~~i~~l~ws~~~~la~~-~d~~V~iwd~~~~~~~~~~~~~~~~~V~~v~~s--p~g~~la~g~~dg~V~iwd~~~~~-- 241 (415)
...|.+++|+++..|+++ .|+.|++||+.+++....+. +|.+.|.+++|+ +++.+|++|+.||.|++||+.+..
T Consensus 162 ~~~V~~l~~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~-~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~ 240 (464)
T 3v7d_B 162 DGGVWALKYAHGGILVSGSTDRTVRVWDIKKGCCTHVFE-GHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSV 240 (464)
T ss_dssp SSCEEEEEECSTTEEEEEETTSCEEEEETTTTEEEEEEC-CCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC
T ss_pred CcCEEEEEEcCCCEEEEEeCCCCEEEEECCCCcEEEEEC-CCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCccc
Confidence 456999999995555555 68999999999998877775 789999999998 578999999999999999998764
Q ss_pred ---------------------eeEEecCCCccEEEEEeeCCEEEEEeCCCcEEEEECCCCCccEEEeccccCCeEEEEEe
Q 014934 242 ---------------------RVRTMEGHRLRVGALAWSSSLLSSGSRDKSILQRDIRAQEDFVSKLSGHKSEVCGLKWS 300 (415)
Q Consensus 242 ---------------------~~~~l~~h~~~V~~l~~~~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~s 300 (415)
.+..+.+|...|.++..++++|++|+.||.|++||+++.. .+..+.+|...|.+++|+
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~vwd~~~~~-~~~~~~~~~~~v~~~~~~ 319 (464)
T 3v7d_B 241 PDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVSGHGNIVVSGSYDNTLIVWDVAQMK-CLYILSGHTDRIYSTIYD 319 (464)
T ss_dssp ------CCSSEEESCGGGCTTEEEEECCCSSCEEEEEEETTEEEEEETTSCEEEEETTTTE-EEEEECCCSSCEEEEEEE
T ss_pred ccccccCCcceEeeccCCCeEEEEEccCccceEEEEcCCCCEEEEEeCCCeEEEEECCCCc-EEEEecCCCCCEEEEEEc
Confidence 2556788999999999999999999999999999999876 678889999999999999
Q ss_pred CCCCEEEEEeCCCcEEEEECCCCceeEEeccCCCcEEEEEEcCCCCcEEEEEcCCCCCeEEEEECCCCcEEEEeeCCCCE
Q 014934 301 YDNRELASGGNDNRLFVWNQHSTQPVLKYCEHTAAVKAIAWSPHLHGLLASGGGTADRCIRFWNTTTNTHLSCMDTGSQV 380 (415)
Q Consensus 301 pdg~~lasg~~dg~I~iwd~~~~~~~~~~~~h~~~V~~l~~sp~~~~llasggg~~d~~I~iwd~~t~~~~~~~~~~~~V 380 (415)
|++++|++|+.||.|++||+++++++..+.+|...|.+++|++ ..+++++ .|+.|++||+.++.......+...+
T Consensus 320 ~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~---~~l~s~s--~dg~v~vwd~~~~~~~~~~~~~~~~ 394 (464)
T 3v7d_B 320 HERKRCISASMDTTIRIWDLENGELMYTLQGHTALVGLLRLSD---KFLVSAA--ADGSIRGWDANDYSRKFSYHHTNLS 394 (464)
T ss_dssp TTTTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECS---SEEEEEE--TTSEEEEEETTTCCEEEEEECTTCC
T ss_pred CCCCEEEEEeCCCcEEEEECCCCcEEEEEeCCCCcEEEEEEcC---CEEEEEe--CCCcEEEEECCCCceeeeecCCCCc
Confidence 9999999999999999999999999999999999999999984 3777776 8999999999999988888888888
Q ss_pred EEEEECCCCCeEEEEEecCCCcEEEEECCCCccc
Q 014934 381 CNLVWSKNVNELVSTHGYSQNQIIVWRYPTMSKV 414 (415)
Q Consensus 381 ~~l~~s~~~~~l~s~~g~~dg~I~vw~~~s~~~l 414 (415)
..++|+++++.|++ |+ ||.|++||+.+++.+
T Consensus 395 ~~~~~~~~~~~l~~--~~-dg~i~iwd~~~g~~~ 425 (464)
T 3v7d_B 395 AITTFYVSDNILVS--GS-ENQFNIYNLRSGKLV 425 (464)
T ss_dssp CEEEEEECSSEEEE--EE-TTEEEEEETTTCCEE
T ss_pred cEEEEEeCCCEEEE--ec-CCeEEEEECCCCcEE
Confidence 99999999999988 55 899999999987654
No 54
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=100.00 E-value=1.8e-31 Score=262.00 Aligned_cols=242 Identities=20% Similarity=0.327 Sum_probs=202.6
Q ss_pred cceeEeecCCCc--EEEE-EcCCeEEEEECCCCC----eEEeEecCCCCCeEEEEEcC-CCCeEEEEECCCcEEEEECCC
Q 014934 168 FYLNLVDWSSHN--VLAV-GLGNCVYLWNACSSK----VTKLCDLGIDDSVCSVGWAN-RNTHLAVGTSHGKVQIWDASR 239 (415)
Q Consensus 168 ~~i~~l~ws~~~--~la~-~~d~~V~iwd~~~~~----~~~~~~~~~~~~V~~v~~sp-~g~~la~g~~dg~V~iwd~~~ 239 (415)
+..+.+++++.. +++. +.++.|+||++.... ....+. +|.+.|++++|+| ++++|++|+.||.|+|||+.+
T Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~-~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~ 113 (402)
T 2aq5_A 35 WDSGFCAVNPKFMALICEASGGGAFLVLPLGKTGRVDKNVPLVC-GHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPD 113 (402)
T ss_dssp CSSCSEEECSSEEEEEBCCSSSCCEEEEETTCCEECCTTCCCBC-CCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCT
T ss_pred cCCCcEEECCCeEEEEEEEcCCCEEEEEECccCCCCCCCCceEe-cCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccC
Confidence 345567888844 3333 357999999986542 122222 7899999999999 999999999999999999988
Q ss_pred C-------eeeEEecCCCccEEEEEeeC---CEEEEEeCCCcEEEEECCCCCccEEEe--ccccCCeEEEEEeCCCCEEE
Q 014934 240 C-------KRVRTMEGHRLRVGALAWSS---SLLSSGSRDKSILQRDIRAQEDFVSKL--SGHKSEVCGLKWSYDNRELA 307 (415)
Q Consensus 240 ~-------~~~~~l~~h~~~V~~l~~~~---~~l~sgs~dg~I~iwd~~~~~~~~~~~--~~h~~~V~~l~~spdg~~la 307 (415)
+ +.+..+.+|...|.+++|++ ++|++|+.||.|++||++++. .+..+ .+|...|.+++|+|++++|+
T Consensus 114 ~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~l~ 192 (402)
T 2aq5_A 114 GGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGA-AVLTLGPDVHPDTIYSVDWSRDGALIC 192 (402)
T ss_dssp TCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTE-EEEEECTTTCCSCEEEEEECTTSSCEE
T ss_pred CCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCC-ccEEEecCCCCCceEEEEECCCCCEEE
Confidence 7 56788899999999999993 589999999999999999886 56677 78999999999999999999
Q ss_pred EEeCCCcEEEEECCCCceeEEe-ccCCCc-EEEEEEcCCCCcEEEEE-cCCCCCeEEEEECCCCcE---EEEeeCCCCEE
Q 014934 308 SGGNDNRLFVWNQHSTQPVLKY-CEHTAA-VKAIAWSPHLHGLLASG-GGTADRCIRFWNTTTNTH---LSCMDTGSQVC 381 (415)
Q Consensus 308 sg~~dg~I~iwd~~~~~~~~~~-~~h~~~-V~~l~~sp~~~~llasg-gg~~d~~I~iwd~~t~~~---~~~~~~~~~V~ 381 (415)
+++.|+.|++||+++++.+..+ ..|.+. +.+++|+|++. +|++| +++.|+.|++||+.+++. ...+.+...+.
T Consensus 193 ~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~ 271 (402)
T 2aq5_A 193 TSCRDKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSEGK-ILTTGFSRMSERQVALWDTKHLEEPLSLQELDTSSGVL 271 (402)
T ss_dssp EEETTSEEEEEETTTTEEEEEEECSSCSSSCCEEEECSTTE-EEEEEECTTCCEEEEEEETTBCSSCSEEEECCCCSSCE
T ss_pred EEecCCcEEEEeCCCCceeeeeccCCCCCcceEEEEcCCCc-EEEEeccCCCCceEEEEcCccccCCceEEeccCCCcee
Confidence 9999999999999999999888 688876 89999999986 66666 112799999999998764 33445678899
Q ss_pred EEEECCCCCeEEEEEecCCCcEEEEECCCCcc
Q 014934 382 NLVWSKNVNELVSTHGYSQNQIIVWRYPTMSK 413 (415)
Q Consensus 382 ~l~~s~~~~~l~s~~g~~dg~I~vw~~~s~~~ 413 (415)
.++|+|+++.|+++ |..|+.|++|++.+.+.
T Consensus 272 ~~~~s~~~~~l~~~-g~~dg~i~i~d~~~~~~ 302 (402)
T 2aq5_A 272 LPFFDPDTNIVYLC-GKGDSSIRYFEITSEAP 302 (402)
T ss_dssp EEEEETTTTEEEEE-ETTCSCEEEEEECSSTT
T ss_pred EEEEcCCCCEEEEE-EcCCCeEEEEEecCCCc
Confidence 99999999999765 66799999999988763
No 55
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.4e-32 Score=267.88 Aligned_cols=242 Identities=17% Similarity=0.400 Sum_probs=207.3
Q ss_pred ceeEeecCC-Cc-EEEEE-----------cCCeEEEEECCCCCeE-EeEecCCCCCeEEEEEcCCCCeEEEEECCCcEEE
Q 014934 169 YLNLVDWSS-HN-VLAVG-----------LGNCVYLWNACSSKVT-KLCDLGIDDSVCSVGWANRNTHLAVGTSHGKVQI 234 (415)
Q Consensus 169 ~i~~l~ws~-~~-~la~~-----------~d~~V~iwd~~~~~~~-~~~~~~~~~~V~~v~~sp~g~~la~g~~dg~V~i 234 (415)
.+.+++|+| +. +|+++ .|+.|++|++.+++.. .+..+.|...|++++|+|++++|++|+.||.|++
T Consensus 14 ~v~~~~~sp~g~~~l~~g~~~g~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~v 93 (416)
T 2pm9_A 14 RTATFAWSHDKIPLLVSGTVSGTVDANFSTDSSLELWSLLAADSEKPIASLQVDSKFNDLDWSHNNKIIAGALDNGSLEL 93 (416)
T ss_dssp ESCBCCBCSSSSCEEEEBCBSSCCCSSCCCCCCCEEEESSSGGGCSCSCCCCCSSCEEEEEECSSSSCEEEEESSSCEEE
T ss_pred hcceEeeCCCCCCEEEEEecCcccccccCCCCeEEEEEccCCCCCcEEEEEecCCceEEEEECCCCCeEEEEccCCeEEE
Confidence 477899999 44 88887 4679999999887532 2223367889999999999999999999999999
Q ss_pred EECCC----CeeeEEecCCCccEEEEEee---CCEEEEEeCCCcEEEEECCCCC------ccE--EEeccccCCeEEEEE
Q 014934 235 WDASR----CKRVRTMEGHRLRVGALAWS---SSLLSSGSRDKSILQRDIRAQE------DFV--SKLSGHKSEVCGLKW 299 (415)
Q Consensus 235 wd~~~----~~~~~~l~~h~~~V~~l~~~---~~~l~sgs~dg~I~iwd~~~~~------~~~--~~~~~h~~~V~~l~~ 299 (415)
||+.+ .+.+..+.+|...|.+++|+ +.+|++|+.||.|++||++... ... .....|...|.+++|
T Consensus 94 w~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 173 (416)
T 2pm9_A 94 YSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVISLAW 173 (416)
T ss_dssp ECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEE
T ss_pred eecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCccccccccccccccccCCCCCeeEEEe
Confidence 99987 45888899999999999998 4699999999999999998875 222 234678999999999
Q ss_pred eCC-CCEEEEEeCCCcEEEEECCCCceeEEeccC------CCcEEEEEEcCCCCcEEEEEcCCCCC---eEEEEECCCC-
Q 014934 300 SYD-NRELASGGNDNRLFVWNQHSTQPVLKYCEH------TAAVKAIAWSPHLHGLLASGGGTADR---CIRFWNTTTN- 368 (415)
Q Consensus 300 spd-g~~lasg~~dg~I~iwd~~~~~~~~~~~~h------~~~V~~l~~sp~~~~llasggg~~d~---~I~iwd~~t~- 368 (415)
+|+ +.+|++++.|+.|++||+++++.+..+..| ...|.+++|+|++..++++++ .|+ .|++||++++
T Consensus 174 ~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~--~d~~~~~i~~~d~~~~~ 251 (416)
T 2pm9_A 174 NQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATAT--GSDNDPSILIWDLRNAN 251 (416)
T ss_dssp CSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEE--CCSSSCCCCEEETTSTT
T ss_pred CCCCCcEEEEEcCCCCEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEE--CCCCCceEEEEeCCCCC
Confidence 999 789999999999999999999999888776 789999999999877888887 787 9999999986
Q ss_pred cEEEEee--CCCCEEEEEECC-CCCeEEEEEecCCCcEEEEECCCCccc
Q 014934 369 THLSCMD--TGSQVCNLVWSK-NVNELVSTHGYSQNQIIVWRYPTMSKV 414 (415)
Q Consensus 369 ~~~~~~~--~~~~V~~l~~s~-~~~~l~s~~g~~dg~I~vw~~~s~~~l 414 (415)
+.+..+. +...|.+++|+| ++++|++ ++.|+.|++||+.+++.+
T Consensus 252 ~~~~~~~~~~~~~v~~~~~s~~~~~~l~s--~~~dg~v~~wd~~~~~~~ 298 (416)
T 2pm9_A 252 TPLQTLNQGHQKGILSLDWCHQDEHLLLS--SGRDNTVLLWNPESAEQL 298 (416)
T ss_dssp SCSBCCCSCCSSCEEEEEECSSCSSCEEE--EESSSEEEEECSSSCCEE
T ss_pred CCcEEeecCccCceeEEEeCCCCCCeEEE--EeCCCCEEEeeCCCCccc
Confidence 5566665 678899999999 8898988 778999999999887643
No 56
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=100.00 E-value=2.1e-31 Score=259.11 Aligned_cols=196 Identities=13% Similarity=0.061 Sum_probs=166.1
Q ss_pred CCeEEEEEcCCCCeEEEEE--CCCcEEEEECCCCeeeEEecCCCccEEEEEee--CCEEEEEeCCCcEEEEECCCCCccE
Q 014934 209 DSVCSVGWANRNTHLAVGT--SHGKVQIWDASRCKRVRTMEGHRLRVGALAWS--SSLLSSGSRDKSILQRDIRAQEDFV 284 (415)
Q Consensus 209 ~~V~~v~~sp~g~~la~g~--~dg~V~iwd~~~~~~~~~l~~h~~~V~~l~~~--~~~l~sgs~dg~I~iwd~~~~~~~~ 284 (415)
..+.+++|+|||++||+++ .|++|+|||+.+++++..+. |...|.+++|+ +.+|++++.+ .+.+|+..++....
T Consensus 134 ~~~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~~~~~~~~-~~~~V~~v~fspdg~~l~s~s~~-~~~~~~~~~~~~~~ 211 (365)
T 4h5i_A 134 DYTKLVYISREGTVAAIASSKVPAIMRIIDPSDLTEKFEIE-TRGEVKDLHFSTDGKVVAYITGS-SLEVISTVTGSCIA 211 (365)
T ss_dssp CCEEEEEECTTSSCEEEEESCSSCEEEEEETTTTEEEEEEE-CSSCCCEEEECTTSSEEEEECSS-CEEEEETTTCCEEE
T ss_pred cCEEEEEEcCCCCEEEEEECCCCCEEEEeECCCCcEEEEeC-CCCceEEEEEccCCceEEeccce-eEEEEEeccCccee
Confidence 4578999999999987665 68999999999999998886 77889999998 4688888754 56777776665333
Q ss_pred -EEeccccCCeEEEEEeCCCCEEEEEeCCC----cEEEEECCCCce----eEEeccCCCcEEEEEEcCCCCcEEEEEcCC
Q 014934 285 -SKLSGHKSEVCGLKWSYDNRELASGGNDN----RLFVWNQHSTQP----VLKYCEHTAAVKAIAWSPHLHGLLASGGGT 355 (415)
Q Consensus 285 -~~~~~h~~~V~~l~~spdg~~lasg~~dg----~I~iwd~~~~~~----~~~~~~h~~~V~~l~~sp~~~~llasggg~ 355 (415)
....+|...|.+++|+|+++++++++.|+ .+++||+..... ...+.+|...|++++|+|+|+ +||+|+
T Consensus 212 ~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~-~lasgs-- 288 (365)
T 4h5i_A 212 RKTDFDKNWSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGE-LAVLAS-- 288 (365)
T ss_dssp EECCCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSC-EEEEEE--
T ss_pred eeecCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEECCCCC-ceEEEc--
Confidence 34557888999999999999999999887 688899876643 345678999999999999997 788887
Q ss_pred CCCeEEEEECCCCcEEEEee--CCCCEEEEEECCCCCeEEEEEecCCCcEEEEECCCC
Q 014934 356 ADRCIRFWNTTTNTHLSCMD--TGSQVCNLVWSKNVNELVSTHGYSQNQIIVWRYPTM 411 (415)
Q Consensus 356 ~d~~I~iwd~~t~~~~~~~~--~~~~V~~l~~s~~~~~l~s~~g~~dg~I~vw~~~s~ 411 (415)
.|+.|+|||+.+++++..+. |...|++++|+|||++|++ |+.|++|+||++|..
T Consensus 289 ~D~~V~iwd~~~~~~~~~~~~gH~~~V~~v~fSpdg~~laS--~S~D~tvrvw~ip~~ 344 (365)
T 4h5i_A 289 NDNSIALVKLKDLSMSKIFKQAHSFAITEVTISPDSTYVAS--VSAANTIHIIKLPLN 344 (365)
T ss_dssp TTSCEEEEETTTTEEEEEETTSSSSCEEEEEECTTSCEEEE--EETTSEEEEEECCTT
T ss_pred CCCEEEEEECCCCcEEEEecCcccCCEEEEEECCCCCEEEE--EeCCCeEEEEEcCCC
Confidence 89999999999999998863 7789999999999999999 789999999999753
No 57
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5.9e-31 Score=257.59 Aligned_cols=237 Identities=17% Similarity=0.301 Sum_probs=210.3
Q ss_pred CcceeEeecCC-CcEEEEE-cCCeEEEEECCCCCeEEeEecCCCCCeEEEEEcCCCCeEEEEECCCcEEEEECCCCeeeE
Q 014934 167 DFYLNLVDWSS-HNVLAVG-LGNCVYLWNACSSKVTKLCDLGIDDSVCSVGWANRNTHLAVGTSHGKVQIWDASRCKRVR 244 (415)
Q Consensus 167 ~~~i~~l~ws~-~~~la~~-~d~~V~iwd~~~~~~~~~~~~~~~~~V~~v~~sp~g~~la~g~~dg~V~iwd~~~~~~~~ 244 (415)
.-.|.+++|+| +++|+++ .++.|++|+ .+++....+. .|...|.+++|+|++++|++++.||.|++||+.+++.+.
T Consensus 108 ~~~v~~~~~s~~~~~l~~~~~dg~i~i~~-~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~ 185 (425)
T 1r5m_A 108 TNQVTCLAWSHDGNSIVTGVENGELRLWN-KTGALLNVLN-FHRAPIVSVKWNKDGTHIISMDVENVTILWNVISGTVMQ 185 (425)
T ss_dssp CBCEEEEEECTTSSEEEEEETTSCEEEEE-TTSCEEEEEC-CCCSCEEEEEECTTSSEEEEEETTCCEEEEETTTTEEEE
T ss_pred CCceEEEEEcCCCCEEEEEeCCCeEEEEe-CCCCeeeecc-CCCccEEEEEECCCCCEEEEEecCCeEEEEECCCCcEEE
Confidence 33699999999 6777776 578999999 5666666664 788999999999999999999999999999999999999
Q ss_pred EecCCCcc---------------EEEEEee-CCEEEEEeCCCcEEEEECCCCCccEEEeccccCCeEEEEEeCCCCEEEE
Q 014934 245 TMEGHRLR---------------VGALAWS-SSLLSSGSRDKSILQRDIRAQEDFVSKLSGHKSEVCGLKWSYDNRELAS 308 (415)
Q Consensus 245 ~l~~h~~~---------------V~~l~~~-~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~spdg~~las 308 (415)
.+..+... +.+++|+ +..+++++.||.|++||++... ....+..|...|.+++|+|++++|++
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~d~~~~~-~~~~~~~~~~~i~~~~~~~~~~~l~~ 264 (425)
T 1r5m_A 186 HFELKETGGSSINAENHSGDGSLGVDVEWVDDDKFVIPGPKGAIFVYQITEKT-PTGKLIGHHGPISVLEFNDTNKLLLS 264 (425)
T ss_dssp EECCC---------------CCCBSCCEEEETTEEEEECGGGCEEEEETTCSS-CSEEECCCSSCEEEEEEETTTTEEEE
T ss_pred EeeccccCccceeeccccCCcceeeEEEEcCCCEEEEEcCCCeEEEEEcCCCc-eeeeeccCCCceEEEEECCCCCEEEE
Confidence 99888776 8889998 6789999999999999999876 56778899999999999999999999
Q ss_pred EeCCCcEEEEECCCCceeEEeccCCCcEEEEEEcCCCCcEEEEEcCCCCCeEEEEECCCCcEEEEee-CCCCEEEEEECC
Q 014934 309 GGNDNRLFVWNQHSTQPVLKYCEHTAAVKAIAWSPHLHGLLASGGGTADRCIRFWNTTTNTHLSCMD-TGSQVCNLVWSK 387 (415)
Q Consensus 309 g~~dg~I~iwd~~~~~~~~~~~~h~~~V~~l~~sp~~~~llasggg~~d~~I~iwd~~t~~~~~~~~-~~~~V~~l~~s~ 387 (415)
++.|+.|++||+.+++.+..+..|...|.+++|+|++ ++++++ .|+.|++||+.+++.+..+. +...|.+++|+|
T Consensus 265 ~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~--~l~~~~--~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~s~ 340 (425)
T 1r5m_A 265 ASDDGTLRIWHGGNGNSQNCFYGHSQSIVSASWVGDD--KVISCS--MDGSVRLWSLKQNTLLALSIVDGVPIFAGRISQ 340 (425)
T ss_dssp EETTSCEEEECSSSBSCSEEECCCSSCEEEEEEETTT--EEEEEE--TTSEEEEEETTTTEEEEEEECTTCCEEEEEECT
T ss_pred EcCCCEEEEEECCCCccceEecCCCccEEEEEECCCC--EEEEEe--CCCcEEEEECCCCcEeEecccCCccEEEEEEcC
Confidence 9999999999999999999999999999999999998 666666 79999999999999888886 578899999999
Q ss_pred CCCeEEEEEecCCCcEEEEECCCCc
Q 014934 388 NVNELVSTHGYSQNQIIVWRYPTMS 412 (415)
Q Consensus 388 ~~~~l~s~~g~~dg~I~vw~~~s~~ 412 (415)
++++|++ ++.||.|++|++.+.+
T Consensus 341 ~~~~l~~--~~~dg~i~i~~~~~~~ 363 (425)
T 1r5m_A 341 DGQKYAV--AFMDGQVNVYDLKKLN 363 (425)
T ss_dssp TSSEEEE--EETTSCEEEEECHHHH
T ss_pred CCCEEEE--EECCCeEEEEECCCCc
Confidence 9999998 7789999999997654
No 58
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=3.8e-31 Score=281.87 Aligned_cols=239 Identities=17% Similarity=0.294 Sum_probs=216.7
Q ss_pred ceeEeecCC-CcEEEEE-cCCeEEEEECCCCCeEEeEecCCCCCeEEEEEcCCCCeEEEEECCCcEEEEECCCCeeeEEe
Q 014934 169 YLNLVDWSS-HNVLAVG-LGNCVYLWNACSSKVTKLCDLGIDDSVCSVGWANRNTHLAVGTSHGKVQIWDASRCKRVRTM 246 (415)
Q Consensus 169 ~i~~l~ws~-~~~la~~-~d~~V~iwd~~~~~~~~~~~~~~~~~V~~v~~sp~g~~la~g~~dg~V~iwd~~~~~~~~~l 246 (415)
.|.+++|+| +.+|+++ .++.|+|||..+++....+. .|...|++++|+|+|++|++|+.||.|++||+.+++.+..+
T Consensus 15 ~v~~i~~sp~~~~la~~~~~g~v~iwd~~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~ 93 (814)
T 3mkq_A 15 RVKGIDFHPTEPWVLTTLYSGRVEIWNYETQVEVRSIQ-VTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDF 93 (814)
T ss_dssp CEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEE-CCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEE
T ss_pred ceEEEEECCCCCEEEEEeCCCEEEEEECCCCceEEEEe-cCCCcEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEE
Confidence 589999999 7777777 47899999999998888776 78999999999999999999999999999999999999999
Q ss_pred cCCCccEEEEEee--CCEEEEEeCCCcEEEEECCCCCccEEEeccccCCeEEEEEeC-CCCEEEEEeCCCcEEEEECCCC
Q 014934 247 EGHRLRVGALAWS--SSLLSSGSRDKSILQRDIRAQEDFVSKLSGHKSEVCGLKWSY-DNRELASGGNDNRLFVWNQHST 323 (415)
Q Consensus 247 ~~h~~~V~~l~~~--~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~sp-dg~~lasg~~dg~I~iwd~~~~ 323 (415)
.+|...|.+++|+ +.+|++|+.||.|++||++........+.+|...|.+++|+| ++++|++++.||.|++||+.++
T Consensus 94 ~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~ 173 (814)
T 3mkq_A 94 EAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQS 173 (814)
T ss_dssp ECCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCS
T ss_pred ecCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEEEcCCCCcEEEEEEEcCCCCEEEEEeCCCeEEEEECCCC
Confidence 9999999999999 468999999999999999987656788889999999999999 8999999999999999999998
Q ss_pred ceeEEeccCC-CcEEEEEEcC--CCCcEEEEEcCCCCCeEEEEECCCCcEEEEee-CCCCEEEEEECCCCCeEEEEEecC
Q 014934 324 QPVLKYCEHT-AAVKAIAWSP--HLHGLLASGGGTADRCIRFWNTTTNTHLSCMD-TGSQVCNLVWSKNVNELVSTHGYS 399 (415)
Q Consensus 324 ~~~~~~~~h~-~~V~~l~~sp--~~~~llasggg~~d~~I~iwd~~t~~~~~~~~-~~~~V~~l~~s~~~~~l~s~~g~~ 399 (415)
.....+..+. ..|.+++|+| ++. ++++++ .|+.|++||+.+++.+..+. +...|.+++|+|+++.|++ |+.
T Consensus 174 ~~~~~~~~~~~~~v~~~~~~~~~~~~-~l~~~~--~dg~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~--~~~ 248 (814)
T 3mkq_A 174 TPNFTLTTGQERGVNYVDYYPLPDKP-YMITAS--DDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLPIIIS--GSE 248 (814)
T ss_dssp SCSEEEECCCTTCCCEEEECCSTTCC-EEEEEC--TTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSEEEE--EET
T ss_pred cceeEEecCCCCCEEEEEEEECCCCC-EEEEEe--CCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEE--EeC
Confidence 8887777655 8899999999 776 666766 79999999999999988887 6788999999999999998 778
Q ss_pred CCcEEEEECCCCcc
Q 014934 400 QNQIIVWRYPTMSK 413 (415)
Q Consensus 400 dg~I~vw~~~s~~~ 413 (415)
||.|++||+.+++.
T Consensus 249 dg~v~vwd~~~~~~ 262 (814)
T 3mkq_A 249 DGTLKIWNSSTYKV 262 (814)
T ss_dssp TSCEEEEETTTCSE
T ss_pred CCeEEEEECCCCcE
Confidence 99999999987653
No 59
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=1.1e-31 Score=261.59 Aligned_cols=239 Identities=14% Similarity=0.212 Sum_probs=204.8
Q ss_pred CcceeEeecCCC--------cEEEEE-cCCeEEEEECCCCCe-----EEeEecCC-----CCCeEEEEEc----CCCCe-
Q 014934 167 DFYLNLVDWSSH--------NVLAVG-LGNCVYLWNACSSKV-----TKLCDLGI-----DDSVCSVGWA----NRNTH- 222 (415)
Q Consensus 167 ~~~i~~l~ws~~--------~~la~~-~d~~V~iwd~~~~~~-----~~~~~~~~-----~~~V~~v~~s----p~g~~- 222 (415)
...|.+++|++. ++|+++ .++.|++|++.+++. ...+. .| ...|.+++|+ |++++
T Consensus 62 ~~~v~~~~~~~~~~~~g~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~~~~~~ 140 (397)
T 1sq9_A 62 KSGLHHVDVLQAIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLD-LLDSDMKKHSFWALKWGASNDRLLSHR 140 (397)
T ss_dssp TTCEEEEEEEEEEETTTEEEEEEEEEETTSCEEEEEEEECTTTCCEEEEEEC-CSCTTGGGSCEEEEEEECCC----CEE
T ss_pred CCcEEEEEEecccccCCccccEEEEEcCCCCEEEEEccCCcccccccceeec-ccccccCCCcEEEEEEeeccCCCCceE
Confidence 346899999986 567666 589999999998875 55554 55 4899999999 99999
Q ss_pred EEEEECCCcEEEEECCC------CeeeE-----Ee-------cCCCccEEEEEeeCC-EEEEEeCCCcEEEEECCCCCcc
Q 014934 223 LAVGTSHGKVQIWDASR------CKRVR-----TM-------EGHRLRVGALAWSSS-LLSSGSRDKSILQRDIRAQEDF 283 (415)
Q Consensus 223 la~g~~dg~V~iwd~~~------~~~~~-----~l-------~~h~~~V~~l~~~~~-~l~sgs~dg~I~iwd~~~~~~~ 283 (415)
|++|+.||.|++||+.+ ++.+. .+ ..|...|.+++|+++ +|++|+.||.|++||+++.. .
T Consensus 141 l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~dg~i~i~d~~~~~-~ 219 (397)
T 1sq9_A 141 LVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERGLIATGFNNGTVQISELSTLR-P 219 (397)
T ss_dssp EEEEETTSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTSEEEEECTTSEEEEEETTTTE-E
T ss_pred EEEEeCCCcEEEEeCCccccccccceeeccCcceeeeeeccccCCCCCceEEEECCCceEEEEeCCCcEEEEECCCCc-e
Confidence 99999999999999988 66665 66 458899999999933 99999999999999999876 5
Q ss_pred EEEecc---c---cCCeEEEEEeCCCCEEEEEeCC---CcEEEEECCCCceeEEecc-------------CCCcEEEEEE
Q 014934 284 VSKLSG---H---KSEVCGLKWSYDNRELASGGND---NRLFVWNQHSTQPVLKYCE-------------HTAAVKAIAW 341 (415)
Q Consensus 284 ~~~~~~---h---~~~V~~l~~spdg~~lasg~~d---g~I~iwd~~~~~~~~~~~~-------------h~~~V~~l~~ 341 (415)
+..+.. | ...|.+++|+|++++|++++.| +.|++||+++++.+..+.. |...|.+++|
T Consensus 220 ~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 299 (397)
T 1sq9_A 220 LYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSF 299 (397)
T ss_dssp EEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEE
T ss_pred eEEEeccccccccCCccceEEECCCCCEEEEEecCCCCceEEEEECCCCcccceeccCcccccccccccccCCcEEEEEE
Confidence 777788 8 9999999999999999999999 9999999999999999988 9999999999
Q ss_pred cCCCCcEEEEEcCCCCCeEEEEECCCCcEEEEee-------C---------------CCCEEEEEECCCC----------
Q 014934 342 SPHLHGLLASGGGTADRCIRFWNTTTNTHLSCMD-------T---------------GSQVCNLVWSKNV---------- 389 (415)
Q Consensus 342 sp~~~~llasggg~~d~~I~iwd~~t~~~~~~~~-------~---------------~~~V~~l~~s~~~---------- 389 (415)
+|++. +|++++ .|+.|++||+.+++.+..+. + ...|.+++|+|++
T Consensus 300 ~~~~~-~l~~~~--~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~ 376 (397)
T 1sq9_A 300 NDSGE-TLCSAG--WDGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLN 376 (397)
T ss_dssp CSSSS-EEEEEE--TTSEEEEEETTTTEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTS
T ss_pred CCCCC-EEEEEe--CCCeEEEEEcCCCceeEEEecccCcccchhhhhccccccccccCCceeEEEecccccccccccccc
Confidence 99987 666666 79999999999999998887 3 6889999999998
Q ss_pred CeEEEEEecCCCcEEEEECCCCc
Q 014934 390 NELVSTHGYSQNQIIVWRYPTMS 412 (415)
Q Consensus 390 ~~l~s~~g~~dg~I~vw~~~s~~ 412 (415)
+.|++ |+.||.|++|++.+++
T Consensus 377 ~~l~s--~~~dg~i~iw~~~~g~ 397 (397)
T 1sq9_A 377 ESLCC--VCLDRSIRWFREAGGK 397 (397)
T ss_dssp CEEEE--EETTTEEEEEEEEC--
T ss_pred ceEEE--ecCCCcEEEEEcCCCC
Confidence 68888 7789999999998753
No 60
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=1.4e-30 Score=260.03 Aligned_cols=234 Identities=21% Similarity=0.323 Sum_probs=207.0
Q ss_pred ceeEeecCCCcEEEEEcCCeEEEEECCCCCeEEeEecCCCCCeEEEEEcCCCCeEEEEECCCcEEEEECCCCeeeEEecC
Q 014934 169 YLNLVDWSSHNVLAVGLGNCVYLWNACSSKVTKLCDLGIDDSVCSVGWANRNTHLAVGTSHGKVQIWDASRCKRVRTMEG 248 (415)
Q Consensus 169 ~i~~l~ws~~~~la~~~d~~V~iwd~~~~~~~~~~~~~~~~~V~~v~~sp~g~~la~g~~dg~V~iwd~~~~~~~~~l~~ 248 (415)
.+.++.++++.+++++.|+.|++||+.+++....+. +|.+.|++++|++++ +|++|+.||.|++||+.+++.+..+.+
T Consensus 124 v~~~~~~~~~~l~sgs~dg~i~vwd~~~~~~~~~~~-~h~~~V~~l~~~~~~-~l~s~s~dg~i~vwd~~~~~~~~~~~~ 201 (464)
T 3v7d_B 124 VITCLQFEDNYVITGADDKMIRVYDSINKKFLLQLS-GHDGGVWALKYAHGG-ILVSGSTDRTVRVWDIKKGCCTHVFEG 201 (464)
T ss_dssp CEEEEEEETTEEEEEETTSCEEEEETTTTEEEEEEC-CCSSCEEEEEECSTT-EEEEEETTSCEEEEETTTTEEEEEECC
T ss_pred cEEEEEECCCEEEEEcCCCcEEEEECCCCcEEEEEe-CCCcCEEEEEEcCCC-EEEEEeCCCCEEEEECCCCcEEEEECC
Confidence 366888876655556678999999999999887776 899999999999988 999999999999999999999999999
Q ss_pred CCccEEEEEee----CCEEEEEeCCCcEEEEECCCCCcc----------------------EEEeccccCCeEEEEEeCC
Q 014934 249 HRLRVGALAWS----SSLLSSGSRDKSILQRDIRAQEDF----------------------VSKLSGHKSEVCGLKWSYD 302 (415)
Q Consensus 249 h~~~V~~l~~~----~~~l~sgs~dg~I~iwd~~~~~~~----------------------~~~~~~h~~~V~~l~~spd 302 (415)
|...|.+++|. +.+|++|+.||.|++||++..... ...+.+|...|.++ +++
T Consensus 202 h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~~ 279 (464)
T 3v7d_B 202 HNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTV--SGH 279 (464)
T ss_dssp CSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEE--EEE
T ss_pred CCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccceEEEE--cCC
Confidence 99999999997 268999999999999999876522 45677898888877 577
Q ss_pred CCEEEEEeCCCcEEEEECCCCceeEEeccCCCcEEEEEEcCCCCcEEEEEcCCCCCeEEEEECCCCcEEEEee-CCCCEE
Q 014934 303 NRELASGGNDNRLFVWNQHSTQPVLKYCEHTAAVKAIAWSPHLHGLLASGGGTADRCIRFWNTTTNTHLSCMD-TGSQVC 381 (415)
Q Consensus 303 g~~lasg~~dg~I~iwd~~~~~~~~~~~~h~~~V~~l~~sp~~~~llasggg~~d~~I~iwd~~t~~~~~~~~-~~~~V~ 381 (415)
+++|++|+.|+.|++||+.+++++..+.+|...|.+++|+|++. .+++++ .|+.|++||+.+++++..+. +...|.
T Consensus 280 ~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~sg~--~dg~i~vwd~~~~~~~~~~~~h~~~v~ 356 (464)
T 3v7d_B 280 GNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERK-RCISAS--MDTTIRIWDLENGELMYTLQGHTALVG 356 (464)
T ss_dssp TTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTTT-EEEEEE--TTSCEEEEETTTTEEEEEECCCSSCEE
T ss_pred CCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCEEEEEEcCCCC-EEEEEe--CCCcEEEEECCCCcEEEEEeCCCCcEE
Confidence 99999999999999999999999999999999999999999987 666666 89999999999999998886 678899
Q ss_pred EEEECCCCCeEEEEEecCCCcEEEEECCCCcc
Q 014934 382 NLVWSKNVNELVSTHGYSQNQIIVWRYPTMSK 413 (415)
Q Consensus 382 ~l~~s~~~~~l~s~~g~~dg~I~vw~~~s~~~ 413 (415)
++.|+ +.+|++ |+.||.|++||+.+.++
T Consensus 357 ~~~~~--~~~l~s--~s~dg~v~vwd~~~~~~ 384 (464)
T 3v7d_B 357 LLRLS--DKFLVS--AAADGSIRGWDANDYSR 384 (464)
T ss_dssp EEEEC--SSEEEE--EETTSEEEEEETTTCCE
T ss_pred EEEEc--CCEEEE--EeCCCcEEEEECCCCce
Confidence 99997 578888 77899999999988654
No 61
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=4e-30 Score=244.88 Aligned_cols=238 Identities=20% Similarity=0.369 Sum_probs=203.9
Q ss_pred CcceeEeecCC-CcEEEEE-cCCeEEEEECCCCCeEEeEecCCCCCeEEEEEcCCCCeEEEEECCCcEEEEECCCCeee-
Q 014934 167 DFYLNLVDWSS-HNVLAVG-LGNCVYLWNACSSKVTKLCDLGIDDSVCSVGWANRNTHLAVGTSHGKVQIWDASRCKRV- 243 (415)
Q Consensus 167 ~~~i~~l~ws~-~~~la~~-~d~~V~iwd~~~~~~~~~~~~~~~~~V~~v~~sp~g~~la~g~~dg~V~iwd~~~~~~~- 243 (415)
...|.+++|+| +.+|+++ .|+.|++|+........... .+...+..+.+++++.+|++|+.||.+++||+......
T Consensus 86 ~~~V~~~~~s~dg~~l~s~~~d~~i~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~ 164 (340)
T 4aow_A 86 SHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFV-GHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYT 164 (340)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE-CCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEE
T ss_pred CCCEEEEEECCCCCEEEEEcccccceEEeecccceeeeec-CCCCceeEEEEeecCccceeecCCCeEEEEEeCCCceEE
Confidence 34699999999 6666666 68999999999887766665 66788999999999999999999999999999765543
Q ss_pred EEecCCCccEEEEEee----CCEEEEEeCCCcEEEEECCCCCccEEEeccccCCeEEEEEeCCCCEEEEEeCCCcEEEEE
Q 014934 244 RTMEGHRLRVGALAWS----SSLLSSGSRDKSILQRDIRAQEDFVSKLSGHKSEVCGLKWSYDNRELASGGNDNRLFVWN 319 (415)
Q Consensus 244 ~~l~~h~~~V~~l~~~----~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~spdg~~lasg~~dg~I~iwd 319 (415)
....+|...+.+++|+ ..++++++.|+.|++||++... ....+.+|...|.+++|+|++++|++|+.|+.|++||
T Consensus 165 ~~~~~~~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~~-~~~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd 243 (340)
T 4aow_A 165 VQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCK-LKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWD 243 (340)
T ss_dssp ECSSSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTTE-EEEEECCCSSCEEEEEECTTSSEEEEEETTCEEEEEE
T ss_pred EEeccccCcccceEEccCCCCcEEEEEcCCCEEEEEECCCCc-eeeEecCCCCcEEEEEECCCCCEEEEEeCCCeEEEEE
Confidence 4456899999999997 2578999999999999999886 6788899999999999999999999999999999999
Q ss_pred CCCCceeEEeccCCCcEEEEEEcCCCCcEEEEEcCCCCCeEEEEECCCCcEEEEee----------CCCCEEEEEECCCC
Q 014934 320 QHSTQPVLKYCEHTAAVKAIAWSPHLHGLLASGGGTADRCIRFWNTTTNTHLSCMD----------TGSQVCNLVWSKNV 389 (415)
Q Consensus 320 ~~~~~~~~~~~~h~~~V~~l~~sp~~~~llasggg~~d~~I~iwd~~t~~~~~~~~----------~~~~V~~l~~s~~~ 389 (415)
+++.+.+..+.. ...|.+++|+|++. +++++ .|+.|++||+.++..+..+. +...|++++|+|++
T Consensus 244 ~~~~~~~~~~~~-~~~v~~~~~~~~~~-~~~~~---~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg 318 (340)
T 4aow_A 244 LNEGKHLYTLDG-GDIINALCFSPNRY-WLCAA---TGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADG 318 (340)
T ss_dssp TTTTEEEEEEEC-SSCEEEEEECSSSS-EEEEE---ETTEEEEEETTTTEEEEEECCC-------CCCCCEEEEEECTTS
T ss_pred eccCceeeeecC-CceEEeeecCCCCc-eeecc---CCCEEEEEECCCCeEEEeccccceeeeccCCCCCEEEEEECCCC
Confidence 999999988854 56899999999874 66554 59999999999988776653 45679999999999
Q ss_pred CeEEEEEecCCCcEEEEECCCCcc
Q 014934 390 NELVSTHGYSQNQIIVWRYPTMSK 413 (415)
Q Consensus 390 ~~l~s~~g~~dg~I~vw~~~s~~~ 413 (415)
++|++ |+.||.|+|||+.+++|
T Consensus 319 ~~l~s--gs~Dg~v~iW~~~tGtr 340 (340)
T 4aow_A 319 QTLFA--GYTDNLVRVWQVTIGTR 340 (340)
T ss_dssp SEEEE--EETTSCEEEEEEEC---
T ss_pred CEEEE--EeCCCEEEEEeCCCcCC
Confidence 99999 78999999999999875
No 62
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.5e-30 Score=244.73 Aligned_cols=233 Identities=18% Similarity=0.196 Sum_probs=202.8
Q ss_pred cceeEeecCCCcEEEEE-cCCeEEEEECCCCCeEEeEecCCCCCeEEEEEcCCCCeEEEEECCCcEEEEECCCC---eee
Q 014934 168 FYLNLVDWSSHNVLAVG-LGNCVYLWNACSSKVTKLCDLGIDDSVCSVGWANRNTHLAVGTSHGKVQIWDASRC---KRV 243 (415)
Q Consensus 168 ~~i~~l~ws~~~~la~~-~d~~V~iwd~~~~~~~~~~~~~~~~~V~~v~~sp~g~~la~g~~dg~V~iwd~~~~---~~~ 243 (415)
-.|++++|..+++|+++ .|+.|++||..+++....+. .|...|.+++|+|++++|++|+.||.|++|++... +.+
T Consensus 19 ~~v~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~ 97 (313)
T 3odt_A 19 QDVRDVVAVDDSKVASVSRDGTVRLWSKDDQWLGTVVY-TGQGFLNSVCYDSEKELLLFGGKDTMINGVPLFATSGEDPL 97 (313)
T ss_dssp SCEEEEEEEETTEEEEEETTSEEEEEEESSSEEEEEEE-ECSSCEEEEEEETTTTEEEEEETTSCEEEEETTCCTTSCC-
T ss_pred CCcEEEEecCCCEEEEEEcCCcEEEEECCCCEEEEEee-cCCccEEEEEECCCCCEEEEecCCCeEEEEEeeecCCCCcc
Confidence 46899999336666666 68999999998888777765 67899999999999999999999999999998654 567
Q ss_pred EEecCCCccEEEEEeeCCEEEEEeCCCcEEEEECCCCCccEEEeccccCCeEEEEEeC-CCCEEEEEeCCCcEEEEECCC
Q 014934 244 RTMEGHRLRVGALAWSSSLLSSGSRDKSILQRDIRAQEDFVSKLSGHKSEVCGLKWSY-DNRELASGGNDNRLFVWNQHS 322 (415)
Q Consensus 244 ~~l~~h~~~V~~l~~~~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~sp-dg~~lasg~~dg~I~iwd~~~ 322 (415)
..+.+|...|.+++|++++|++++.||.|++|| .. .....+..|...|.+++|+| ++++|++++.|+.|++|| .
T Consensus 98 ~~~~~~~~~i~~~~~~~~~l~~~~~d~~i~~~d--~~-~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d--~ 172 (313)
T 3odt_A 98 YTLIGHQGNVCSLSFQDGVVISGSWDKTAKVWK--EG-SLVYNLQAHNASVWDAKVVSFSENKFLTASADKTIKLWQ--N 172 (313)
T ss_dssp CEECCCSSCEEEEEEETTEEEEEETTSEEEEEE--TT-EEEEEEECCSSCEEEEEEEETTTTEEEEEETTSCEEEEE--T
T ss_pred cchhhcccCEEEEEecCCEEEEEeCCCCEEEEc--CC-cEEEecccCCCceeEEEEccCCCCEEEEEECCCCEEEEe--c
Confidence 788899999999999999999999999999999 33 35777889999999999998 999999999999999999 5
Q ss_pred CceeEEecc-CCCcEEEEEEcCCCCcEEEEEcCCCCCeEEEEECCCCcEEEEee-CCCCEEEEEECCCCCeEEEEEecCC
Q 014934 323 TQPVLKYCE-HTAAVKAIAWSPHLHGLLASGGGTADRCIRFWNTTTNTHLSCMD-TGSQVCNLVWSKNVNELVSTHGYSQ 400 (415)
Q Consensus 323 ~~~~~~~~~-h~~~V~~l~~sp~~~~llasggg~~d~~I~iwd~~t~~~~~~~~-~~~~V~~l~~s~~~~~l~s~~g~~d 400 (415)
.+.+..+.. |...|.+++|+|++. +++++ .|+.|++||+.+++.+..+. +...|.+++|+|++ .|++ ++.|
T Consensus 173 ~~~~~~~~~~~~~~i~~~~~~~~~~--~~~~~--~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~--~~~d 245 (313)
T 3odt_A 173 DKVIKTFSGIHNDVVRHLAVVDDGH--FISCS--NDGLIKLVDMHTGDVLRTYEGHESFVYCIKLLPNG-DIVS--CGED 245 (313)
T ss_dssp TEEEEEECSSCSSCEEEEEEEETTE--EEEEE--TTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTS-CEEE--EETT
T ss_pred CceEEEEeccCcccEEEEEEcCCCe--EEEcc--CCCeEEEEECCchhhhhhhhcCCceEEEEEEecCC-CEEE--EecC
Confidence 566777776 999999999999987 55555 79999999999999998887 77889999999999 5776 6789
Q ss_pred CcEEEEECCCCcc
Q 014934 401 NQIIVWRYPTMSK 413 (415)
Q Consensus 401 g~I~vw~~~s~~~ 413 (415)
|.|++||+.+.+.
T Consensus 246 g~v~iwd~~~~~~ 258 (313)
T 3odt_A 246 RTVRIWSKENGSL 258 (313)
T ss_dssp SEEEEECTTTCCE
T ss_pred CEEEEEECCCCce
Confidence 9999999988764
No 63
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=100.00 E-value=2.7e-31 Score=263.67 Aligned_cols=238 Identities=20% Similarity=0.377 Sum_probs=202.4
Q ss_pred cceeEeecCCC--cEEEEEc-CCeEEEEECCC----------CCeEEeEecCCCCCeEEEEEcCCCC-eEEEEECCCcEE
Q 014934 168 FYLNLVDWSSH--NVLAVGL-GNCVYLWNACS----------SKVTKLCDLGIDDSVCSVGWANRNT-HLAVGTSHGKVQ 233 (415)
Q Consensus 168 ~~i~~l~ws~~--~~la~~~-d~~V~iwd~~~----------~~~~~~~~~~~~~~V~~v~~sp~g~-~la~g~~dg~V~ 233 (415)
..|++++|+|. ++|+++. ++.|++|++.+ ......+. +|...|++++|+|++. +|++|+.||.|+
T Consensus 129 ~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~-~h~~~v~~l~~~~~~~~~l~s~~~dg~i~ 207 (430)
T 2xyi_A 129 GEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLR-GHQKEGYGLSWNPNLNGYLLSASDDHTIC 207 (430)
T ss_dssp SCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEE-CCSSCCCCEEECTTSTTEEEEECTTSCEE
T ss_pred CcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEec-CCCCCeEEEEeCCCCCCeEEEEeCCCeEE
Confidence 45889999993 5777774 78999999976 34444444 7889999999999998 999999999999
Q ss_pred EEECCCCee-------eEEecCCCccEEEEEee---CCEEEEEeCCCcEEEEECCCCC--ccEEEeccccCCeEEEEEeC
Q 014934 234 IWDASRCKR-------VRTMEGHRLRVGALAWS---SSLLSSGSRDKSILQRDIRAQE--DFVSKLSGHKSEVCGLKWSY 301 (415)
Q Consensus 234 iwd~~~~~~-------~~~l~~h~~~V~~l~~~---~~~l~sgs~dg~I~iwd~~~~~--~~~~~~~~h~~~V~~l~~sp 301 (415)
+||+.++.. ...+.+|...|.+++|+ +.+|++++.||.|++||++... .....+..|...|.+++|+|
T Consensus 208 vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p 287 (430)
T 2xyi_A 208 LWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNP 287 (430)
T ss_dssp EEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEECCSSCEEEEEECS
T ss_pred EEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeecCCCCeEEEEeCC
Confidence 999987322 45677899999999997 4689999999999999999873 35667779999999999999
Q ss_pred CCC-EEEEEeCCCcEEEEECCC-CceeEEeccCCCcEEEEEEcCCCCcEEEEEcCCCCCeEEEEECCC------------
Q 014934 302 DNR-ELASGGNDNRLFVWNQHS-TQPVLKYCEHTAAVKAIAWSPHLHGLLASGGGTADRCIRFWNTTT------------ 367 (415)
Q Consensus 302 dg~-~lasg~~dg~I~iwd~~~-~~~~~~~~~h~~~V~~l~~sp~~~~llasggg~~d~~I~iwd~~t------------ 367 (415)
++. +|++|+.||.|++||+++ ..++..+..|...|.+++|+|++..+|++++ .|+.|++||+..
T Consensus 288 ~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~--~d~~i~iwd~~~~~~~~~~~~~~~ 365 (430)
T 2xyi_A 288 YSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSG--TDRRLHVWDLSKIGEEQSTEDAED 365 (430)
T ss_dssp SCTTEEEEEETTSEEEEEETTCTTSCSEEEECCSSCEEEEEECSSCTTEEEEEE--TTSCCEEEEGGGTTCCCCHHHHHH
T ss_pred CCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecCCCCEEEEEECCCCCCEEEEEe--CCCcEEEEeCCCCccccCcccccc
Confidence 887 789999999999999998 5778899899999999999999988899987 899999999987
Q ss_pred --CcEEEEee-CCCCEEEEEECCCCC-eEEEEEecCCCcEEEEECCC
Q 014934 368 --NTHLSCMD-TGSQVCNLVWSKNVN-ELVSTHGYSQNQIIVWRYPT 410 (415)
Q Consensus 368 --~~~~~~~~-~~~~V~~l~~s~~~~-~l~s~~g~~dg~I~vw~~~s 410 (415)
.+.+..+. +...|.+++|+|++. .|++ ++.||.|+||++..
T Consensus 366 ~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s--~s~dg~i~iw~~~~ 410 (430)
T 2xyi_A 366 GPPELLFIHGGHTAKISDFSWNPNEPWIICS--VSEDNIMQVWQMAE 410 (430)
T ss_dssp CCTTEEEECCCCSSCEEEEEECSSSTTEEEE--EETTSEEEEEEECH
T ss_pred CCcceEEEcCCCCCCceEEEECCCCCCEEEE--EECCCCEEEeEccc
Confidence 24555543 567899999999999 5666 66899999999864
No 64
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=1.5e-31 Score=256.20 Aligned_cols=239 Identities=13% Similarity=0.262 Sum_probs=202.9
Q ss_pred CcceeEeecCC-C-cEEEEEc----CCeEEEEECCCCCeEEeEecCCCCCeEEEEEcCC---CCeEEEEECCCcEEEEEC
Q 014934 167 DFYLNLVDWSS-H-NVLAVGL----GNCVYLWNACSSKVTKLCDLGIDDSVCSVGWANR---NTHLAVGTSHGKVQIWDA 237 (415)
Q Consensus 167 ~~~i~~l~ws~-~-~~la~~~----d~~V~iwd~~~~~~~~~~~~~~~~~V~~v~~sp~---g~~la~g~~dg~V~iwd~ 237 (415)
...|.+++|+| + .+++++. |+.|++|++.+++.......+|...|++++|+|+ |.+|++|+.||.|++||+
T Consensus 18 ~~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iwd~ 97 (357)
T 3i2n_A 18 NYTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGDLKLLREIEKAKPIKCGTFGATSLQQRYLATGDFGGNLHIWNL 97 (357)
T ss_dssp SSCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSSEEEEEEEEESSCEEEEECTTCCTTTCCEEEEETTSCEEEECT
T ss_pred CCceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCcccceeeecccCcEEEEEEcCCCCCCceEEEecCCCeEEEEeC
Confidence 44699999999 5 4666663 7899999999998877766688899999999998 799999999999999999
Q ss_pred CCCe-eeEEecCCCccEEEEEe------e--CCEEEEEeCCCcEEEEECCCCCccEEEeccccC----CeEEEE----Ee
Q 014934 238 SRCK-RVRTMEGHRLRVGALAW------S--SSLLSSGSRDKSILQRDIRAQEDFVSKLSGHKS----EVCGLK----WS 300 (415)
Q Consensus 238 ~~~~-~~~~l~~h~~~V~~l~~------~--~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~----~V~~l~----~s 300 (415)
.+++ .+..+.+|...|.+++| + +.+|++|+.||.|++||++........+..|.. .|.+++ |+
T Consensus 98 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 177 (357)
T 3i2n_A 98 EAPEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYN 177 (357)
T ss_dssp TSCSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC
T ss_pred CCCCccEEEEEecccceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCCCcceeccccCCCCCCceEEEEEEeccC
Confidence 9887 88899999999999966 3 469999999999999999988755667766554 799998 78
Q ss_pred CCCCEEEEEeCCCcEEEEECCCCceeEEeccCCCcEEEEEEcC---CCCcEEEEEcCCCCCeEEEEECCCCcEEEEe---
Q 014934 301 YDNRELASGGNDNRLFVWNQHSTQPVLKYCEHTAAVKAIAWSP---HLHGLLASGGGTADRCIRFWNTTTNTHLSCM--- 374 (415)
Q Consensus 301 pdg~~lasg~~dg~I~iwd~~~~~~~~~~~~h~~~V~~l~~sp---~~~~llasggg~~d~~I~iwd~~t~~~~~~~--- 374 (415)
|++++|++|+.|+.|++||+++++.... ..|...|.+++|+| ++. ++++++ .|+.|++||+.+++.+..+
T Consensus 178 ~~~~~l~~~~~d~~i~i~d~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~-~l~~~~--~dg~i~i~d~~~~~~~~~~~~~ 253 (357)
T 3i2n_A 178 QEERVVCAGYDNGDIKLFDLRNMALRWE-TNIKNGVCSLEFDRKDISMN-KLVATS--LEGKFHVFDMRTQHPTKGFASV 253 (357)
T ss_dssp -CCCEEEEEETTSEEEEEETTTTEEEEE-EECSSCEEEEEESCSSSSCC-EEEEEE--STTEEEEEEEEEEETTTEEEEE
T ss_pred CCCCEEEEEccCCeEEEEECccCceeee-cCCCCceEEEEcCCCCCCCC-EEEEEC--CCCeEEEEeCcCCCcccceeee
Confidence 8999999999999999999999887554 57899999999999 776 566665 7999999999887654333
Q ss_pred ---eCCCCEEEEEECCCCC-eEEEEEecCCCcEEEEECCCC
Q 014934 375 ---DTGSQVCNLVWSKNVN-ELVSTHGYSQNQIIVWRYPTM 411 (415)
Q Consensus 375 ---~~~~~V~~l~~s~~~~-~l~s~~g~~dg~I~vw~~~s~ 411 (415)
.+...|.+++|+|+++ +|++ |+.||.|++|++.+.
T Consensus 254 ~~~~~~~~v~~~~~~~~~~~~l~~--~~~dg~i~iwd~~~~ 292 (357)
T 3i2n_A 254 SEKAHKSTVWQVRHLPQNRELFLT--AGGAGGLHLWKYEYP 292 (357)
T ss_dssp EEECCSSCEEEEEEETTEEEEEEE--EETTSEEEEEEEECC
T ss_pred ccCCCcCCEEEEEECCCCCcEEEE--EeCCCcEEEeecCCC
Confidence 4778899999999998 5666 778999999999754
No 65
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.7e-31 Score=261.80 Aligned_cols=240 Identities=21% Similarity=0.388 Sum_probs=204.6
Q ss_pred CcceeEeecCC-CcEEEEE-cCCeEEEEECCC----CCeEEeEecCCCCCeEEEEEcCC-CCeEEEEECCCcEEEEECCC
Q 014934 167 DFYLNLVDWSS-HNVLAVG-LGNCVYLWNACS----SKVTKLCDLGIDDSVCSVGWANR-NTHLAVGTSHGKVQIWDASR 239 (415)
Q Consensus 167 ~~~i~~l~ws~-~~~la~~-~d~~V~iwd~~~----~~~~~~~~~~~~~~V~~v~~sp~-g~~la~g~~dg~V~iwd~~~ 239 (415)
...+++++|+| +.+|+++ .++.|++|++.+ .+....+. +|...|++++|+|+ +.+|++|+.||.|++||+.+
T Consensus 67 ~~~v~~~~~s~~~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~ 145 (416)
T 2pm9_A 67 DSKFNDLDWSHNNKIIAGALDNGSLELYSTNEANNAINSMARFS-NHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNK 145 (416)
T ss_dssp SSCEEEEEECSSSSCEEEEESSSCEEEECCSSTTSCCCEEEECC-CSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTT
T ss_pred CCceEEEEECCCCCeEEEEccCCeEEEeecccccccccchhhcc-CCccceEEEEEcCCCCCEEEEEcCCCeEEEEECCC
Confidence 34689999999 6677776 679999999987 33444443 78999999999998 89999999999999999988
Q ss_pred Ce------eeE---EecCCCccEEEEEeeC---CEEEEEeCCCcEEEEECCCCCccEEEeccc------cCCeEEEEEeC
Q 014934 240 CK------RVR---TMEGHRLRVGALAWSS---SLLSSGSRDKSILQRDIRAQEDFVSKLSGH------KSEVCGLKWSY 301 (415)
Q Consensus 240 ~~------~~~---~l~~h~~~V~~l~~~~---~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h------~~~V~~l~~sp 301 (415)
++ ... .+..|...|.+++|++ .+|++++.||.|++||++... .+..+..| ...|.+++|+|
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~-~~~~~~~~~~~~~~~~~v~~~~~~~ 224 (416)
T 2pm9_A 146 CTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKK-EVIHLSYTSPNSGIKQQLSVVEWHP 224 (416)
T ss_dssp TSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTE-EEEEECCCCCSSCCCCCEEEEEECS
T ss_pred CccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCC-cceEEeccccccccCCceEEEEECC
Confidence 76 332 2367999999999984 589999999999999999876 46666655 78899999999
Q ss_pred CC-CEEEEEeCCC---cEEEEECCCC-ceeEEec-cCCCcEEEEEEcC-CCCcEEEEEcCCCCCeEEEEECCCCcEEEEe
Q 014934 302 DN-RELASGGNDN---RLFVWNQHST-QPVLKYC-EHTAAVKAIAWSP-HLHGLLASGGGTADRCIRFWNTTTNTHLSCM 374 (415)
Q Consensus 302 dg-~~lasg~~dg---~I~iwd~~~~-~~~~~~~-~h~~~V~~l~~sp-~~~~llasggg~~d~~I~iwd~~t~~~~~~~ 374 (415)
++ .+|++++.|+ .|++||++++ .++..+. +|...|.+++|+| ++. +|++++ .|+.|++||+.+++.+..+
T Consensus 225 ~~~~~l~~~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~-~l~s~~--~dg~v~~wd~~~~~~~~~~ 301 (416)
T 2pm9_A 225 KNSTRVATATGSDNDPSILIWDLRNANTPLQTLNQGHQKGILSLDWCHQDEH-LLLSSG--RDNTVLLWNPESAEQLSQF 301 (416)
T ss_dssp SCTTEEEEEECCSSSCCCCEEETTSTTSCSBCCCSCCSSCEEEEEECSSCSS-CEEEEE--SSSEEEEECSSSCCEEEEE
T ss_pred CCCCEEEEEECCCCCceEEEEeCCCCCCCcEEeecCccCceeEEEeCCCCCC-eEEEEe--CCCCEEEeeCCCCccceee
Confidence 97 6899999998 9999999986 6777887 8999999999999 555 777776 7999999999999999888
Q ss_pred e-CCCCEEEEEECCCC-CeEEEEEecCCCcEEEEECCCCcc
Q 014934 375 D-TGSQVCNLVWSKNV-NELVSTHGYSQNQIIVWRYPTMSK 413 (415)
Q Consensus 375 ~-~~~~V~~l~~s~~~-~~l~s~~g~~dg~I~vw~~~s~~~ 413 (415)
. +...|.+++|+|++ ..|++ ++.|+.|++|++.+...
T Consensus 302 ~~~~~~v~~~~~s~~~~~~l~s--~~~d~~i~iw~~~~~~~ 340 (416)
T 2pm9_A 302 PARGNWCFKTKFAPEAPDLFAC--ASFDNKIEVQTLQNLTN 340 (416)
T ss_dssp ECSSSCCCCEEECTTCTTEEEE--CCSSSEEEEEESCCCCC
T ss_pred cCCCCceEEEEECCCCCCEEEE--EecCCcEEEEEccCCCC
Confidence 6 57789999999999 77777 78899999999987653
No 66
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=1.2e-31 Score=257.51 Aligned_cols=238 Identities=21% Similarity=0.337 Sum_probs=203.1
Q ss_pred CcceeEeecCC----Cc--EEEEEcCCeEEEEECCCCCeEEeEec----CCCCCeEEEEEcCC----CCeEEEEECCCcE
Q 014934 167 DFYLNLVDWSS----HN--VLAVGLGNCVYLWNACSSKVTKLCDL----GIDDSVCSVGWANR----NTHLAVGTSHGKV 232 (415)
Q Consensus 167 ~~~i~~l~ws~----~~--~la~~~d~~V~iwd~~~~~~~~~~~~----~~~~~V~~v~~sp~----g~~la~g~~dg~V 232 (415)
.-.|++++|+| +. +++++.++.|++|+..+++....+.. .|...|++++|+|+ |.+|++|+.||.|
T Consensus 18 ~~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~dg~i 97 (366)
T 3k26_A 18 NQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAGSRGII 97 (366)
T ss_dssp CSCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEEETTCEE
T ss_pred CCceEEEEEecccCCCCceEEEECCCCEEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEecCCCEE
Confidence 34699999996 23 77777889999999998776554432 36688999999998 6799999999999
Q ss_pred EEEECCCCeeeEEecCCCccEEEEEeeC---CEEEEEeCCCcEEEEECCCCCccEEEe---ccccCCeEEEEEeCCCCEE
Q 014934 233 QIWDASRCKRVRTMEGHRLRVGALAWSS---SLLSSGSRDKSILQRDIRAQEDFVSKL---SGHKSEVCGLKWSYDNREL 306 (415)
Q Consensus 233 ~iwd~~~~~~~~~l~~h~~~V~~l~~~~---~~l~sgs~dg~I~iwd~~~~~~~~~~~---~~h~~~V~~l~~spdg~~l 306 (415)
++||+.+++.+..+.+|...|.+++|++ .+|++|+.||.|++||++.+. ....+ .+|...|.+++|+|++++|
T Consensus 98 ~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l 176 (366)
T 3k26_A 98 RIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDT-LVAIFGGVEGHRDEVLSADYDLLGEKI 176 (366)
T ss_dssp EEECTTTCCEEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTE-EEEEECSTTSCSSCEEEEEECTTSSEE
T ss_pred EEEEchhceEeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCe-EEEEecccccccCceeEEEECCCCCEE
Confidence 9999999999999999999999999974 799999999999999999876 45666 6899999999999999999
Q ss_pred EEEeCCCcEEEEECCCCceeEEec----------------------------cCCCcEEEEEEcCCCCcEEEEEcCCCCC
Q 014934 307 ASGGNDNRLFVWNQHSTQPVLKYC----------------------------EHTAAVKAIAWSPHLHGLLASGGGTADR 358 (415)
Q Consensus 307 asg~~dg~I~iwd~~~~~~~~~~~----------------------------~h~~~V~~l~~sp~~~~llasggg~~d~ 358 (415)
++|+.||.|++||+++++.+..+. .|...|.+++|+ +. ++++++ .|+
T Consensus 177 ~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~-~l~~~~--~d~ 251 (366)
T 3k26_A 177 MSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL--GD-LILSKS--CEN 251 (366)
T ss_dssp EEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE--TT-EEEEEC--SSS
T ss_pred EEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEc--CC-EEEEEe--cCC
Confidence 999999999999999875543333 399999999999 44 777776 899
Q ss_pred eEEEEECCCCcE--------------EEEee-CCCCEEEEEECCC--CCeEEEEEecCCCcEEEEECCCCc
Q 014934 359 CIRFWNTTTNTH--------------LSCMD-TGSQVCNLVWSKN--VNELVSTHGYSQNQIIVWRYPTMS 412 (415)
Q Consensus 359 ~I~iwd~~t~~~--------------~~~~~-~~~~V~~l~~s~~--~~~l~s~~g~~dg~I~vw~~~s~~ 412 (415)
.|++||+.++.. +..+. +...|.+++|+|+ +++|++ |+.||.|++||+.+.+
T Consensus 252 ~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l~~--~~~dg~i~vwd~~~~~ 320 (366)
T 3k26_A 252 AIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLAL--GNQVGKLYVWDLEVED 320 (366)
T ss_dssp EEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSSEEEE--ECTTSCEEEEECCSSS
T ss_pred EEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCCCCCcEEEE--EecCCcEEEEECCCCC
Confidence 999999988754 44444 5678999999999 999998 7899999999998865
No 67
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=1.9e-31 Score=257.21 Aligned_cols=243 Identities=17% Similarity=0.209 Sum_probs=203.6
Q ss_pred CcceeEeecCC-CcEEEEE-cCCeEEEEECCCCCeEEeEe-cCCCCCeEEEEEcCCCCeEEEEECCCcEEEEECCCCe--
Q 014934 167 DFYLNLVDWSS-HNVLAVG-LGNCVYLWNACSSKVTKLCD-LGIDDSVCSVGWANRNTHLAVGTSHGKVQIWDASRCK-- 241 (415)
Q Consensus 167 ~~~i~~l~ws~-~~~la~~-~d~~V~iwd~~~~~~~~~~~-~~~~~~V~~v~~sp~g~~la~g~~dg~V~iwd~~~~~-- 241 (415)
...+++++|+| +++|+++ .|+.|++||+.+++...... ..|...|.+++|+|++++|++|+.||.|++||+...+
T Consensus 52 ~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~ 131 (372)
T 1k8k_C 52 NGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDW 131 (372)
T ss_dssp SSCEEEEEEETTTTEEEEEETTSCEEEEEEETTEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTE
T ss_pred CCcccEEEEeCCCCEEEEEcCCCeEEEEECCCCeeeeeEEeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcc
Confidence 34699999999 6666666 57999999998887655554 3688899999999999999999999999999998765
Q ss_pred --eeEEecCCCccEEEEEee--CCEEEEEeCCCcEEEEECCC-----------------CCccEEEeccccCCeEEEEEe
Q 014934 242 --RVRTMEGHRLRVGALAWS--SSLLSSGSRDKSILQRDIRA-----------------QEDFVSKLSGHKSEVCGLKWS 300 (415)
Q Consensus 242 --~~~~l~~h~~~V~~l~~~--~~~l~sgs~dg~I~iwd~~~-----------------~~~~~~~~~~h~~~V~~l~~s 300 (415)
.......|...|.+++|+ +.+|++|+.||.|++||++. ....+..+.+|...|.+++|+
T Consensus 132 ~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 211 (372)
T 1k8k_C 132 WVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFS 211 (372)
T ss_dssp EEEEEECTTCCSCEEEEEECTTSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEEC
T ss_pred eeeeeeecccCCCeeEEEEcCCCCEEEEEcCCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEEC
Confidence 233346789999999998 47999999999999999641 123577788999999999999
Q ss_pred CCCCEEEEEeCCCcEEEEECCCCceeEEeccCCCcEEEEEEcCCCCcEEEEEcCCCCCeEEEEECCC--CcE--------
Q 014934 301 YDNRELASGGNDNRLFVWNQHSTQPVLKYCEHTAAVKAIAWSPHLHGLLASGGGTADRCIRFWNTTT--NTH-------- 370 (415)
Q Consensus 301 pdg~~lasg~~dg~I~iwd~~~~~~~~~~~~h~~~V~~l~~sp~~~~llasggg~~d~~I~iwd~~t--~~~-------- 370 (415)
|++++|++++.|+.|++||+++++++..+..|...|.+++|+|++. +++++ .|+.|++|++.+ ++.
T Consensus 212 ~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~---~d~~i~i~~~~~~~~~~~~~~~~~~ 287 (372)
T 1k8k_C 212 ANGSRVAWVSHDSTVCLADADKKMAVATLASETLPLLAVTFITESS-LVAAG---HDCFPVLFTYDSAAGKLSFGGRLDV 287 (372)
T ss_dssp SSSSEEEEEETTTEEEEEEGGGTTEEEEEECSSCCEEEEEEEETTE-EEEEE---TTSSCEEEEEETTTTEEEECCCCCC
T ss_pred CCCCEEEEEeCCCEEEEEECCCCceeEEEccCCCCeEEEEEecCCC-EEEEE---eCCeEEEEEccCcCceEEEeeccCc
Confidence 9999999999999999999999999999999999999999999986 66665 599999999987 421
Q ss_pred ------------------------E------EEe--eCCCCEEEEEEC-CCC---CeEEEEEecCCCcEEEEECCCCccc
Q 014934 371 ------------------------L------SCM--DTGSQVCNLVWS-KNV---NELVSTHGYSQNQIIVWRYPTMSKV 414 (415)
Q Consensus 371 ------------------------~------~~~--~~~~~V~~l~~s-~~~---~~l~s~~g~~dg~I~vw~~~s~~~l 414 (415)
. ..+ .|...|.+++|. ++| .+|++ |+.||.|++|++.+++++
T Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~g~~~~~l~s--~~~Dg~i~~W~~~~~~~~ 365 (372)
T 1k8k_C 288 PKQSSQRGLTARERFQNLDKKASSEGSAAAGAGLDSLHKNSVSQISVLSGGKAKCSQFCT--TGMDGGMSIWDVRSLESA 365 (372)
T ss_dssp C--------CHHHHHHHCCCCC---------CCCSSSSSSCEEEEEEEESTTTSCSEEEE--EETTSEEEEEEHHHHHHH
T ss_pred cccchhhhcchhhhhhhcccccccccCccccccccccccCCcceeEEecCCCcceeeEEE--ecCCCceEEEEecChhHh
Confidence 0 112 367789999976 666 88888 789999999999887665
Q ss_pred C
Q 014934 415 L 415 (415)
Q Consensus 415 l 415 (415)
+
T Consensus 366 ~ 366 (372)
T 1k8k_C 366 L 366 (372)
T ss_dssp C
T ss_pred h
Confidence 3
No 68
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=1.1e-30 Score=254.28 Aligned_cols=235 Identities=15% Similarity=0.196 Sum_probs=196.0
Q ss_pred cceeEeecCC-C-cEEEEE-cCCeEEEEECCCCCeEEeEec-CCCCCeEEEEEcC-CCCeEEEEECCCcEEEEECCCCee
Q 014934 168 FYLNLVDWSS-H-NVLAVG-LGNCVYLWNACSSKVTKLCDL-GIDDSVCSVGWAN-RNTHLAVGTSHGKVQIWDASRCKR 242 (415)
Q Consensus 168 ~~i~~l~ws~-~-~~la~~-~d~~V~iwd~~~~~~~~~~~~-~~~~~V~~v~~sp-~g~~la~g~~dg~V~iwd~~~~~~ 242 (415)
-.|++++|+| + ++|+++ .|+.|++||+.+++....+.. +|...|.+++|+| ++++|++|+.||.|++||+.. +.
T Consensus 74 ~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~-~~ 152 (383)
T 3ei3_B 74 RRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIRGATTLRDFSG-SV 152 (383)
T ss_dssp SCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETTTEEEEEETTS-CE
T ss_pred CCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeCCCEEEEEECCC-Cc
Confidence 4699999999 4 677777 579999999999888777754 6899999999999 789999999999999999986 55
Q ss_pred eEEecC---CCccEEEEEee--CCEEEEEeCCCcEEEEECCCCCccEEEeccccCCeEEEEEeCCCC-EEEEEeCCCcEE
Q 014934 243 VRTMEG---HRLRVGALAWS--SSLLSSGSRDKSILQRDIRAQEDFVSKLSGHKSEVCGLKWSYDNR-ELASGGNDNRLF 316 (415)
Q Consensus 243 ~~~l~~---h~~~V~~l~~~--~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~spdg~-~lasg~~dg~I~ 316 (415)
+..+.. |...|.+++|+ +.+|++|+.|+.|++||++ .. .+..+.+|...|.+++|+|+++ +|++|+.|+.|+
T Consensus 153 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~-~~-~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~ 230 (383)
T 3ei3_B 153 IQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGLD-GH-EIFKEKLHKAKVTHAEFNPRCDWLMATSSVDATVK 230 (383)
T ss_dssp EEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEETT-SC-EEEEEECSSSCEEEEEECSSCTTEEEEEETTSEEE
T ss_pred eEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEECC-CC-EEEEeccCCCcEEEEEECCCCCCEEEEEeCCCEEE
Confidence 555543 44889999999 5899999999999999995 33 5778889999999999999999 999999999999
Q ss_pred EEECCC----CceeEEeccCCCcEEEEEEcC-CCCcEEEEEcCCCCCeEEEEECCCCcEEEEee-C--------------
Q 014934 317 VWNQHS----TQPVLKYCEHTAAVKAIAWSP-HLHGLLASGGGTADRCIRFWNTTTNTHLSCMD-T-------------- 376 (415)
Q Consensus 317 iwd~~~----~~~~~~~~~h~~~V~~l~~sp-~~~~llasggg~~d~~I~iwd~~t~~~~~~~~-~-------------- 376 (415)
+||+++ +..+..+ +|...|.+++|+| ++. +|++++ .|+.|++||+.+++.+..+. +
T Consensus 231 iwd~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~-~l~~~~--~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (383)
T 3ei3_B 231 LWDLRNIKDKNSYIAEM-PHEKPVNAAYFNPTDST-KLLTTD--QRNEIRVYSSYDWSKPDQIIIHPHRQFQHLTPIKAT 306 (383)
T ss_dssp EEEGGGCCSTTCEEEEE-ECSSCEEEEEECTTTSC-EEEEEE--SSSEEEEEETTBTTSCSEEEECCBCCCTTSCCCCCE
T ss_pred EEeCCCCCcccceEEEe-cCCCceEEEEEcCCCCC-EEEEEc--CCCcEEEEECCCCccccccccccccccccccceEEe
Confidence 999987 5666666 7999999999999 877 666666 79999999999887655543 1
Q ss_pred ---CCCEEEEEECCCCCeEEEEEecCCCcEEEEECCCCcc
Q 014934 377 ---GSQVCNLVWSKNVNELVSTHGYSQNQIIVWRYPTMSK 413 (415)
Q Consensus 377 ---~~~V~~l~~s~~~~~l~s~~g~~dg~I~vw~~~s~~~ 413 (415)
...+..++|+|++++ + |+.|+.|+|||+.+++.
T Consensus 307 ~~p~~~~~~~~~s~dg~~--s--~s~d~~i~iwd~~~~~~ 342 (383)
T 3ei3_B 307 WHPMYDLIVAGRYPDDQL--L--LNDKRTIDIYDANSGGL 342 (383)
T ss_dssp ECSSSSEEEEECBCCTTT--C--TTCCCCEEEEETTTCCE
T ss_pred ccCCCCceEEEecCCccc--c--cCCCCeEEEEecCCCce
Confidence 123445666777766 3 67899999999988764
No 69
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=1.1e-30 Score=254.26 Aligned_cols=234 Identities=15% Similarity=0.212 Sum_probs=191.7
Q ss_pred CcceeEeecCC--CcEEEEE-cCCeEEEEECCCCCeEEeEec-CCCCCeEEEEEcCCCCeEEEEECCCcEEEEECCCCee
Q 014934 167 DFYLNLVDWSS--HNVLAVG-LGNCVYLWNACSSKVTKLCDL-GIDDSVCSVGWANRNTHLAVGTSHGKVQIWDASRCKR 242 (415)
Q Consensus 167 ~~~i~~l~ws~--~~~la~~-~d~~V~iwd~~~~~~~~~~~~-~~~~~V~~v~~sp~g~~la~g~~dg~V~iwd~~~~~~ 242 (415)
...|.+++|+| +++|+++ .|+.|++||+.+......... .+...|.+++|+|++++|++|+.||.|++||+ +++.
T Consensus 118 ~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~-~~~~ 196 (383)
T 3ei3_B 118 GDAITGMKFNQFNTNQLFVSSIRGATTLRDFSGSVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGL-DGHE 196 (383)
T ss_dssp TCBEEEEEEETTEEEEEEEEETTTEEEEEETTSCEEEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEET-TSCE
T ss_pred CCceeEEEeCCCCCCEEEEEeCCCEEEEEECCCCceEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEEC-CCCE
Confidence 45699999999 3566655 689999999986444333321 33578999999999999999999999999999 5778
Q ss_pred eEEecCCCccEEEEEeeC--C-EEEEEeCCCcEEEEECCCCC---ccEEEeccccCCeEEEEEeC-CCCEEEEEeCCCcE
Q 014934 243 VRTMEGHRLRVGALAWSS--S-LLSSGSRDKSILQRDIRAQE---DFVSKLSGHKSEVCGLKWSY-DNRELASGGNDNRL 315 (415)
Q Consensus 243 ~~~l~~h~~~V~~l~~~~--~-~l~sgs~dg~I~iwd~~~~~---~~~~~~~~h~~~V~~l~~sp-dg~~lasg~~dg~I 315 (415)
+..+.+|...|.+++|++ . +|++|+.|+.|++||++... ..+..+ +|...|.+++|+| ++++|++++.|+.|
T Consensus 197 ~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~~l~~~~~d~~i 275 (383)
T 3ei3_B 197 IFKEKLHKAKVTHAEFNPRCDWLMATSSVDATVKLWDLRNIKDKNSYIAEM-PHEKPVNAAYFNPTDSTKLLTTDQRNEI 275 (383)
T ss_dssp EEEEECSSSCEEEEEECSSCTTEEEEEETTSEEEEEEGGGCCSTTCEEEEE-ECSSCEEEEEECTTTSCEEEEEESSSEE
T ss_pred EEEeccCCCcEEEEEECCCCCCEEEEEeCCCEEEEEeCCCCCcccceEEEe-cCCCceEEEEEcCCCCCEEEEEcCCCcE
Confidence 889999999999999994 4 89999999999999999732 234444 7999999999999 99999999999999
Q ss_pred EEEECCCCceeEEeccCC-----------------CcEEEEEEcCCCCcEEEEEcCCCCCeEEEEECCCCcEEEEee---
Q 014934 316 FVWNQHSTQPVLKYCEHT-----------------AAVKAIAWSPHLHGLLASGGGTADRCIRFWNTTTNTHLSCMD--- 375 (415)
Q Consensus 316 ~iwd~~~~~~~~~~~~h~-----------------~~V~~l~~sp~~~~llasggg~~d~~I~iwd~~t~~~~~~~~--- 375 (415)
++||+++++.+..+..|. ..+..++|+|++.. +++ .|+.|++||+.+++.+..+.
T Consensus 276 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~s~dg~~---s~s--~d~~i~iwd~~~~~~~~~l~~~~ 350 (383)
T 3ei3_B 276 RVYSSYDWSKPDQIIIHPHRQFQHLTPIKATWHPMYDLIVAGRYPDDQL---LLN--DKRTIDIYDANSGGLVHQLRDPN 350 (383)
T ss_dssp EEEETTBTTSCSEEEECCBCCCTTSCCCCCEECSSSSEEEEECBCCTTT---CTT--CCCCEEEEETTTCCEEEEECBTT
T ss_pred EEEECCCCccccccccccccccccccceEEeccCCCCceEEEecCCccc---ccC--CCCeEEEEecCCCceeeeecCCC
Confidence 999999988776666543 34455667777664 444 89999999999999998886
Q ss_pred CCCCEEEEEECCCCCeEEEEEecCCCcEEEEECCC
Q 014934 376 TGSQVCNLVWSKNVNELVSTHGYSQNQIIVWRYPT 410 (415)
Q Consensus 376 ~~~~V~~l~~s~~~~~l~s~~g~~dg~I~vw~~~s 410 (415)
+...+..++|+|++++|++ |+ |+.|+||++.+
T Consensus 351 ~~~~~~~~~~s~~g~~l~s--~s-d~~i~iw~~~~ 382 (383)
T 3ei3_B 351 AAGIISLNKFSPTGDVLAS--GM-GFNILIWNRED 382 (383)
T ss_dssp BCSCCCEEEECTTSSEEEE--EE-TTEEEEEECC-
T ss_pred CCceEEEEEEecCccEEEE--ec-CCcEEEEecCC
Confidence 3456777899999999988 54 89999999875
No 70
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=100.00 E-value=5.4e-30 Score=249.66 Aligned_cols=240 Identities=19% Similarity=0.327 Sum_probs=200.2
Q ss_pred cceeEeecCC--CcEEEEE-cCCeEEEEECCCCCeEEeEe------------cCCCCCeEEEEEcC-CCCeEEEEECCCc
Q 014934 168 FYLNLVDWSS--HNVLAVG-LGNCVYLWNACSSKVTKLCD------------LGIDDSVCSVGWAN-RNTHLAVGTSHGK 231 (415)
Q Consensus 168 ~~i~~l~ws~--~~~la~~-~d~~V~iwd~~~~~~~~~~~------------~~~~~~V~~v~~sp-~g~~la~g~~dg~ 231 (415)
-.|++++|+| +++|+++ .|+.|++|++.+++...... .+|...|.+++|+| ++.+|++|+.||.
T Consensus 44 ~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~ 123 (408)
T 4a11_B 44 GGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFTSSSFDKT 123 (408)
T ss_dssp SCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCEEEEETTSE
T ss_pred CcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCcEEEEEeCCCe
Confidence 4689999998 5666666 68999999999887655443 14889999999999 7789999999999
Q ss_pred EEEEECCCCeeeEEecCCCccEEEEEeeC-----CEEEEEeCCCcEEEEECCCCCccEEEeccccCCeEEEEEeCCCC-E
Q 014934 232 VQIWDASRCKRVRTMEGHRLRVGALAWSS-----SLLSSGSRDKSILQRDIRAQEDFVSKLSGHKSEVCGLKWSYDNR-E 305 (415)
Q Consensus 232 V~iwd~~~~~~~~~l~~h~~~V~~l~~~~-----~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~spdg~-~ 305 (415)
|++||+.+++.+..+. +...+.++.|.+ .++++|+.||.|++||++.+. .+..+.+|...|.+++|+|+++ +
T Consensus 124 i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~-~~~~~~~~~~~v~~~~~~~~~~~l 201 (408)
T 4a11_B 124 LKVWDTNTLQTADVFN-FEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGS-CSHILQGHRQEILAVSWSPRYDYI 201 (408)
T ss_dssp EEEEETTTTEEEEEEE-CSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSC-CCEEECCCCSCEEEEEECSSCTTE
T ss_pred EEEeeCCCCccceecc-CCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcc-eeeeecCCCCcEEEEEECCCCCcE
Confidence 9999999999888877 778899999973 389999999999999999876 5778889999999999999998 5
Q ss_pred EEEEeCCCcEEEEECCCCc-eeEEe---------------ccCCCcEEEEEEcCCCCcEEEEEcCCCCCeEEEEECCCCc
Q 014934 306 LASGGNDNRLFVWNQHSTQ-PVLKY---------------CEHTAAVKAIAWSPHLHGLLASGGGTADRCIRFWNTTTNT 369 (415)
Q Consensus 306 lasg~~dg~I~iwd~~~~~-~~~~~---------------~~h~~~V~~l~~sp~~~~llasggg~~d~~I~iwd~~t~~ 369 (415)
|++|+.||.|++||++++. .+..+ ..|...|.+++|+|++. +|++++ .|+.|++||+.+++
T Consensus 202 l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~--~dg~i~vwd~~~~~ 278 (408)
T 4a11_B 202 LATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGL-HLLTVG--TDNRMRLWNSSNGE 278 (408)
T ss_dssp EEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSS-EEEEEE--TTSCEEEEETTTCC
T ss_pred EEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcCCCC-EEEEec--CCCeEEEEECCCCc
Confidence 9999999999999998765 44444 57889999999999987 556665 79999999987653
Q ss_pred -----------------------------------------------EEEEee-CCCCEEEEEECCCCCeEEEEEecCCC
Q 014934 370 -----------------------------------------------HLSCMD-TGSQVCNLVWSKNVNELVSTHGYSQN 401 (415)
Q Consensus 370 -----------------------------------------------~~~~~~-~~~~V~~l~~s~~~~~l~s~~g~~dg 401 (415)
.+..+. +...|.+++|+|++++|++ |+.||
T Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s--~~~dg 356 (408)
T 4a11_B 279 NTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQITMLKGHYKTVDCCVFQSNFQELYS--GSRDC 356 (408)
T ss_dssp BCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCCEEEEECCCSSCEEEEEEETTTTEEEE--EETTS
T ss_pred cceeccccccccccccceeEEecCCCceEEEEecCCEEEEEECcCCcceeeeccCCCeEEEEEEcCCCCEEEE--ECCCC
Confidence 333343 5678999999999999998 77899
Q ss_pred cEEEEECCCCccc
Q 014934 402 QIIVWRYPTMSKV 414 (415)
Q Consensus 402 ~I~vw~~~s~~~l 414 (415)
.|++|++.+.+.+
T Consensus 357 ~i~iw~~~~~~~~ 369 (408)
T 4a11_B 357 NILAWVPSLYEPV 369 (408)
T ss_dssp CEEEEEECC----
T ss_pred eEEEEeCCCCCcc
Confidence 9999999987653
No 71
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=1.5e-30 Score=267.61 Aligned_cols=237 Identities=15% Similarity=0.247 Sum_probs=212.0
Q ss_pred CcceeEeecCC-CcEEEEEcCCeEEEEECCCC----CeEEeEecCCCCC-eEEEEEcC--CCCeEEEEECCCcEEEEECC
Q 014934 167 DFYLNLVDWSS-HNVLAVGLGNCVYLWNACSS----KVTKLCDLGIDDS-VCSVGWAN--RNTHLAVGTSHGKVQIWDAS 238 (415)
Q Consensus 167 ~~~i~~l~ws~-~~~la~~~d~~V~iwd~~~~----~~~~~~~~~~~~~-V~~v~~sp--~g~~la~g~~dg~V~iwd~~ 238 (415)
...+++++|+| +++|+++.++.|++|++.++ +....+. +|.+. |++++|+| ++++||+|+.||.|++||+.
T Consensus 18 ~~~v~~~~~spdg~~l~~~~~~~v~v~~~~~~~~~~~~~~~~~-~h~~~~v~~~~~sp~~~~~~l~s~~~dg~v~vw~~~ 96 (615)
T 1pgu_A 18 RNFTTHLSYDPTTNAIAYPCGKSAFVRCLDDGDSKVPPVVQFT-GHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWT 96 (615)
T ss_dssp TTCCCCCEEETTTTEEEEEETTEEEEEECCSSCCSSCSEEEEC-TTTTSCEEEEEECSSTTCCEEEEEETTSEEEEEEEE
T ss_pred cCceeEEEECCCCCEEEEecCCeEEEEECCCCCCccccceEEe-cCCCceEEEEEECcCCCCCEEEEecCCCEEEEEeCC
Confidence 34688999999 88999999999999999988 6666665 78899 99999999 99999999999999999997
Q ss_pred CC--------eeeEEecCCCccEEEEEee--CCEEEEEeCC----CcEEEEECCCCCccEEEeccccCCeEEEEEeCCCC
Q 014934 239 RC--------KRVRTMEGHRLRVGALAWS--SSLLSSGSRD----KSILQRDIRAQEDFVSKLSGHKSEVCGLKWSYDNR 304 (415)
Q Consensus 239 ~~--------~~~~~l~~h~~~V~~l~~~--~~~l~sgs~d----g~I~iwd~~~~~~~~~~~~~h~~~V~~l~~spdg~ 304 (415)
++ +.+..+..|...|.+++|+ +.+|++++.+ +.|++||. .. ....+.+|...|.+++|+|+++
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~v~~~d~--~~-~~~~~~~~~~~v~~~~~~~~~~ 173 (615)
T 1pgu_A 97 FDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWDS--GN-SLGEVSGHSQRINACHLKQSRP 173 (615)
T ss_dssp EEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEECCSSCSEEEEETTT--CC-EEEECCSCSSCEEEEEECSSSS
T ss_pred CCcccccccccccchhhcccccEEEEEEeCCCCEEEEeccCCCCccEEEEEEC--CC-cceeeecCCccEEEEEECCCCC
Confidence 44 6777888999999999999 4789999888 68888883 33 5778889999999999999998
Q ss_pred -EEEEEeCCCcEEEEECCCCceeEEeccCCC---cEEEEEEcCC-CCcEEEEEcCCCCCeEEEEECCCCcEEEEe-----
Q 014934 305 -ELASGGNDNRLFVWNQHSTQPVLKYCEHTA---AVKAIAWSPH-LHGLLASGGGTADRCIRFWNTTTNTHLSCM----- 374 (415)
Q Consensus 305 -~lasg~~dg~I~iwd~~~~~~~~~~~~h~~---~V~~l~~sp~-~~~llasggg~~d~~I~iwd~~t~~~~~~~----- 374 (415)
+|++++.|+.|++||+.+++.+..+.+|.. .|.+++|+|+ +. +|++++ .|+.|++||+.+++.+..+
T Consensus 174 ~~l~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-~l~~~~--~dg~i~vwd~~~~~~~~~~~~~~~ 250 (615)
T 1pgu_A 174 MRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGE-FVITVG--SDRKISCFDGKSGEFLKYIEDDQE 250 (615)
T ss_dssp CEEEEEETTTEEEEEETTTBEEEEEECSSSCTTCCEEEEEECSTTCC-EEEEEE--TTCCEEEEETTTCCEEEECCBTTB
T ss_pred cEEEEEeCCCcEEEEeCCCcceeeeecccCCCCceEEEEEECCCCCC-EEEEEe--CCCeEEEEECCCCCEeEEeccccc
Confidence 899999999999999999999999999999 9999999999 76 666666 7999999999999999998
Q ss_pred eCCCCEEEEEECCCCCeEEEEEecCCCcEEEEECCCCcc
Q 014934 375 DTGSQVCNLVWSKNVNELVSTHGYSQNQIIVWRYPTMSK 413 (415)
Q Consensus 375 ~~~~~V~~l~~s~~~~~l~s~~g~~dg~I~vw~~~s~~~ 413 (415)
.+...|.++.|+ +++.|++ ++.|+.|++||+.+++.
T Consensus 251 ~~~~~v~~~~~~-~~~~l~~--~~~d~~i~~wd~~~~~~ 286 (615)
T 1pgu_A 251 PVQGGIFALSWL-DSQKFAT--VGADATIRVWDVTTSKC 286 (615)
T ss_dssp CCCSCEEEEEES-SSSEEEE--EETTSEEEEEETTTTEE
T ss_pred ccCCceEEEEEc-CCCEEEE--EcCCCcEEEEECCCCcE
Confidence 678899999999 9999998 77899999999987654
No 72
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=9.4e-30 Score=244.31 Aligned_cols=237 Identities=14% Similarity=0.231 Sum_probs=206.7
Q ss_pred CcceeEeecCC-CcEEEEE-cCCeEEEEECCCCCeEEeEecCCCCCeEEEEEcCCCCeEEEEECC-----CcEEEEECCC
Q 014934 167 DFYLNLVDWSS-HNVLAVG-LGNCVYLWNACSSKVTKLCDLGIDDSVCSVGWANRNTHLAVGTSH-----GKVQIWDASR 239 (415)
Q Consensus 167 ~~~i~~l~ws~-~~~la~~-~d~~V~iwd~~~~~~~~~~~~~~~~~V~~v~~sp~g~~la~g~~d-----g~V~iwd~~~ 239 (415)
...|.+++|+| +++|+++ .|+.|++||+.+++....+. +...|.+++|+|++++|++++.+ |.|.+||+..
T Consensus 74 ~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~ 151 (369)
T 3zwl_B 74 TGTIWSIDVDCFTKYCVTGSADYSIKLWDVSNGQCVATWK--SPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIER 151 (369)
T ss_dssp SSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEE--CSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEE
T ss_pred CCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEee--cCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecC
Confidence 34699999999 6666666 68999999999999888775 67899999999999999999999 9999999865
Q ss_pred Ce-----------eeEEecCCCc--cEEEEEee--CCEEEEEeCCCcEEEEECCCCCccEEEeccccCCeEEEEEeCCCC
Q 014934 240 CK-----------RVRTMEGHRL--RVGALAWS--SSLLSSGSRDKSILQRDIRAQEDFVSKLSGHKSEVCGLKWSYDNR 304 (415)
Q Consensus 240 ~~-----------~~~~l~~h~~--~V~~l~~~--~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~spdg~ 304 (415)
.. .+..+..|.. .+.+++|+ +.+|++++.||.|++||++........+..|...|.+++|+|+++
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 231 (369)
T 3zwl_B 152 DSATHELTKVSEEPIHKIITHEGLDAATVAGWSTKGKYIIAGHKDGKISKYDVSNNYEYVDSIDLHEKSISDMQFSPDLT 231 (369)
T ss_dssp CTTTCCEEEECSSCSEEEECCTTCCCEEEEEECGGGCEEEEEETTSEEEEEETTTTTEEEEEEECCSSCEEEEEECTTSS
T ss_pred CccceeecccccceeeeccCCcCccceeEEEEcCCCCEEEEEcCCCEEEEEECCCCcEeEEEEecCCCceeEEEECCCCC
Confidence 42 3444556666 89999998 579999999999999999985557888889999999999999999
Q ss_pred EEEEEeCCCcEEEEECCCCceeEEeccCCCcEEEEEEcCCCCcEEEEEcCCCCC--------------eEEEEECCCCcE
Q 014934 305 ELASGGNDNRLFVWNQHSTQPVLKYCEHTAAVKAIAWSPHLHGLLASGGGTADR--------------CIRFWNTTTNTH 370 (415)
Q Consensus 305 ~lasg~~dg~I~iwd~~~~~~~~~~~~h~~~V~~l~~sp~~~~llasggg~~d~--------------~I~iwd~~t~~~ 370 (415)
+|++++.|+.|++||+++++.+..+. +...+..++|+|++..+++.+ .++ .|++||+.+++.
T Consensus 232 ~l~~~~~d~~i~v~d~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~---~~~~~~~~~~~~~~~~~~i~~~d~~~~~~ 307 (369)
T 3zwl_B 232 YFITSSRDTNSFLVDVSTLQVLKKYE-TDCPLNTAVITPLKEFIILGG---GQEAKDVTTTSANEGKFEARFYHKIFEEE 307 (369)
T ss_dssp EEEEEETTSEEEEEETTTCCEEEEEE-CSSCEEEEEECSSSSEEEEEE---CCC-------------CEEEEEETTTCCE
T ss_pred EEEEecCCceEEEEECCCCceeeeec-CCCCceeEEecCCCceEEEee---cCCCceEEEEecCCCcceeEEEecCCCcc
Confidence 99999999999999999999988885 788999999999998555544 355 899999999999
Q ss_pred EEEee-CCCCEEEEEECCCCCeEEEEEecCCCcEEEEECCCC
Q 014934 371 LSCMD-TGSQVCNLVWSKNVNELVSTHGYSQNQIIVWRYPTM 411 (415)
Q Consensus 371 ~~~~~-~~~~V~~l~~s~~~~~l~s~~g~~dg~I~vw~~~s~ 411 (415)
+..+. +...|.+++|+|++++|++ ++.||.|++|++...
T Consensus 308 ~~~~~~~~~~v~~~~~s~~~~~l~s--~~~dg~v~iw~~~~~ 347 (369)
T 3zwl_B 308 IGRVQGHFGPLNTVAISPQGTSYAS--GGEDGFIRLHHFEKS 347 (369)
T ss_dssp EEEEECCSSCEEEEEECTTSSEEEE--EETTSEEEEEEECHH
T ss_pred hhheecccCcEEEEEECCCCCEEEE--EcCCCeEEEEECccc
Confidence 88886 6788999999999999999 778999999999764
No 73
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=1.9e-31 Score=265.09 Aligned_cols=242 Identities=16% Similarity=0.187 Sum_probs=192.0
Q ss_pred CcceeEeecCC--CcEEEEE-cCCeEEEEECCCCCeEEeEec-CCCCCeEEEEEcC-CCCeEEEEECCCcEEEEECCCCe
Q 014934 167 DFYLNLVDWSS--HNVLAVG-LGNCVYLWNACSSKVTKLCDL-GIDDSVCSVGWAN-RNTHLAVGTSHGKVQIWDASRCK 241 (415)
Q Consensus 167 ~~~i~~l~ws~--~~~la~~-~d~~V~iwd~~~~~~~~~~~~-~~~~~V~~v~~sp-~g~~la~g~~dg~V~iwd~~~~~ 241 (415)
+..|++|+|+| .++||+| .||.|+|||+.+++......+ +|.+.|++|+|+| ++.+|++|+.||+|+|||+++..
T Consensus 119 ~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~~~~ 198 (435)
T 4e54_B 119 DRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFKGNI 198 (435)
T ss_dssp SSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEEETTSCE
T ss_pred CCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEeeccCCc
Confidence 34599999998 5678877 589999999988876555543 7999999999998 68999999999999999998765
Q ss_pred eeEEecC--CCccEEEEEee--CCEEEEEeCCCcEEEEECCCCCccEEEeccccCCeEEEEEeCCCC-EEEEEeCCCcEE
Q 014934 242 RVRTMEG--HRLRVGALAWS--SSLLSSGSRDKSILQRDIRAQEDFVSKLSGHKSEVCGLKWSYDNR-ELASGGNDNRLF 316 (415)
Q Consensus 242 ~~~~l~~--h~~~V~~l~~~--~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~spdg~-~lasg~~dg~I~ 316 (415)
....... +...+.+++|+ +.+|++|+.||.|++||++.. .+..+.+|...|.+++|+|++. +|++|+.|+.|+
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~~--~~~~~~~h~~~v~~v~~~p~~~~~~~s~s~d~~v~ 276 (435)
T 4e54_B 199 LRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMDGK--ELWNLRMHKKKVTHVALNPCCDWFLATASVDQTVK 276 (435)
T ss_dssp EEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESSSC--BCCCSBCCSSCEEEEEECTTCSSEEEEEETTSBCC
T ss_pred eeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccCcc--eeEEEecccceEEeeeecCCCceEEEEecCcceee
Confidence 4433333 34567888998 579999999999999999754 3567889999999999999876 788999999999
Q ss_pred EEECCCCceeE---EeccCCCcEEEEEEcCCCCcEEEEEcCCCCCeEEEEECCCCcEEEEee-CC------CCEEEEEEC
Q 014934 317 VWNQHSTQPVL---KYCEHTAAVKAIAWSPHLHGLLASGGGTADRCIRFWNTTTNTHLSCMD-TG------SQVCNLVWS 386 (415)
Q Consensus 317 iwd~~~~~~~~---~~~~h~~~V~~l~~sp~~~~llasggg~~d~~I~iwd~~t~~~~~~~~-~~------~~V~~l~~s 386 (415)
|||+++.+... ...+|...|.+++|+|++. +|++++ .|+.|++||+.+++....+. +. ..+..+.|+
T Consensus 277 iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~-~l~s~~--~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (435)
T 4e54_B 277 IWDLRQVRGKASFLYSLPHRHPVNAACFSPDGA-RLLTTD--QKSEIRVYSASQWDCPLGLIPHPHRHFQHLTPIKAAWH 353 (435)
T ss_dssp EEETTTCCSSSCCSBCCBCSSCEEECCBCTTSS-EEEEEE--SSSCEEEEESSSSSSEEEECCCCCCCCSSSCCCBCEEC
T ss_pred EEecccccccceEEEeeeccccccceeECCCCC-eeEEEc--CCCEEEEEECCCCccceEEecccccccccceeEEEEEc
Confidence 99998865433 3357999999999999997 666666 89999999999988776653 11 123456777
Q ss_pred CCCCeEEEEE----------ecCCCcEEEEECCCCcc
Q 014934 387 KNVNELVSTH----------GYSQNQIIVWRYPTMSK 413 (415)
Q Consensus 387 ~~~~~l~s~~----------g~~dg~I~vw~~~s~~~ 413 (415)
+++..++++. +..++.|++||..+++.
T Consensus 354 ~~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~~ 390 (435)
T 4e54_B 354 PRYNLIVVGRYPDPNFKSCTPYELRTIDVFDGNSGKM 390 (435)
T ss_dssp SSSSCEEEECCCCTTSCCSSTTCCCCEEEECSSSCCE
T ss_pred CCCCEEEEEEcCCCCeEEEEecCCCEEEEEECCCCcE
Confidence 7777766631 12346799999988764
No 74
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=3.8e-30 Score=263.50 Aligned_cols=230 Identities=23% Similarity=0.442 Sum_probs=201.6
Q ss_pred cceeEeecCC-CcEEEEE-cCCeEEEEECCCCCeEEeEecCCCCCeEEEEEcCCCCeEEEEECCCcEEEEECCCCeeeEE
Q 014934 168 FYLNLVDWSS-HNVLAVG-LGNCVYLWNACSSKVTKLCDLGIDDSVCSVGWANRNTHLAVGTSHGKVQIWDASRCKRVRT 245 (415)
Q Consensus 168 ~~i~~l~ws~-~~~la~~-~d~~V~iwd~~~~~~~~~~~~~~~~~V~~v~~sp~g~~la~g~~dg~V~iwd~~~~~~~~~ 245 (415)
..+.+++|+| +..|+++ .|+.|++||.....+.. +. +|...|.+++|+|+|++|++|+.||.|++||. +++.+..
T Consensus 304 ~~v~~~~~~~~~~~l~t~~~d~~i~~w~~~~~~~~~-~~-~~~~~v~~~~~s~~g~~l~~~~~dg~v~~~~~-~~~~~~~ 380 (577)
T 2ymu_A 304 SSVWGVAFSPDGQTIASASDDKTVKLWNRNGQHLQT-LT-GHSSSVWGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQT 380 (577)
T ss_dssp SCEEEEEECTTSSEEEEEETTSCEEEEETTSCEEEE-EC-CCSSCEEEEEECTTSSEEEEEETTSEEEEEET-TCCEEEE
T ss_pred CCeEEEEECCCCCEEEEEeCCCeEEEEeCCCCeeEE-Ee-CCCCCEEEEEECCCCCEEEEEeCCCEEEEEcC-CCCEEEE
Confidence 3588999999 6666666 67899999987655433 33 78899999999999999999999999999995 5678888
Q ss_pred ecCCCccEEEEEee--CCEEEEEeCCCcEEEEECCCCCccEEEeccccCCeEEEEEeCCCCEEEEEeCCCcEEEEECCCC
Q 014934 246 MEGHRLRVGALAWS--SSLLSSGSRDKSILQRDIRAQEDFVSKLSGHKSEVCGLKWSYDNRELASGGNDNRLFVWNQHST 323 (415)
Q Consensus 246 l~~h~~~V~~l~~~--~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~spdg~~lasg~~dg~I~iwd~~~~ 323 (415)
+.+|...|.+++|+ +.+|++++.|+.|++||... . .+..+.+|...|.+++|+|++++|++++.|+.|++||. ++
T Consensus 381 ~~~~~~~v~~~~~s~dg~~l~~~~~d~~v~~~~~~~-~-~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~~v~~w~~-~~ 457 (577)
T 2ymu_A 381 LTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNG-Q-LLQTLTGHSSSVWGVAFSPDDQTIASASDDKTVKLWNR-NG 457 (577)
T ss_dssp EECCSSCEEEEEECTTSSCEEEEETTSEEEEECTTC-C-EEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEET-TS
T ss_pred ecCCCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCC-C-EEEEecCCCCCeEEEEECCCCCEEEEEcCCCEEEEEEC-CC
Confidence 99999999999998 57999999999999999643 3 57788899999999999999999999999999999996 56
Q ss_pred ceeEEeccCCCcEEEEEEcCCCCcEEEEEcCCCCCeEEEEECCCCcEEEEee-CCCCEEEEEECCCCCeEEEEEecCCCc
Q 014934 324 QPVLKYCEHTAAVKAIAWSPHLHGLLASGGGTADRCIRFWNTTTNTHLSCMD-TGSQVCNLVWSKNVNELVSTHGYSQNQ 402 (415)
Q Consensus 324 ~~~~~~~~h~~~V~~l~~sp~~~~llasggg~~d~~I~iwd~~t~~~~~~~~-~~~~V~~l~~s~~~~~l~s~~g~~dg~ 402 (415)
+.+..+.+|...|.+++|+|+++ +|++++ .|+.|++||. +++++..+. |...|.+++|+|++++|++ ++.|+.
T Consensus 458 ~~~~~~~~~~~~v~~~~~spd~~-~las~~--~d~~i~iw~~-~~~~~~~~~~h~~~v~~l~~s~dg~~l~s--~~~dg~ 531 (577)
T 2ymu_A 458 QLLQTLTGHSSSVRGVAFSPDGQ-TIASAS--DDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIAS--ASDDKT 531 (577)
T ss_dssp CEEEEEECCSSCEEEEEECTTSC-EEEEEE--TTSEEEEEET-TSCEEEEEECCSSCEEEEEECTTSSCEEE--EETTSE
T ss_pred CEEEEEcCCCCCEEEEEEcCCCC-EEEEEe--CCCEEEEEcC-CCCEEEEEeCCCCCEEEEEEcCCCCEEEE--EECcCE
Confidence 78888899999999999999997 677776 8999999995 677777776 6788999999999999998 778999
Q ss_pred EEEEECC
Q 014934 403 IIVWRYP 409 (415)
Q Consensus 403 I~vw~~~ 409 (415)
|+|||++
T Consensus 532 v~lwd~~ 538 (577)
T 2ymu_A 532 VKLWNRN 538 (577)
T ss_dssp EEEECTT
T ss_pred EEEEeCC
Confidence 9999974
No 75
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.2e-31 Score=263.74 Aligned_cols=241 Identities=13% Similarity=0.166 Sum_probs=197.5
Q ss_pred CcceeEeecCC--CcEEEEE-cCCeEEEEECCC---CCeE-EeEecCCCCCeEEEEEcCCCCeEEEEECCCcEEEEECC-
Q 014934 167 DFYLNLVDWSS--HNVLAVG-LGNCVYLWNACS---SKVT-KLCDLGIDDSVCSVGWANRNTHLAVGTSHGKVQIWDAS- 238 (415)
Q Consensus 167 ~~~i~~l~ws~--~~~la~~-~d~~V~iwd~~~---~~~~-~~~~~~~~~~V~~v~~sp~g~~la~g~~dg~V~iwd~~- 238 (415)
.-.|++++|+| +.+|++| .|+.|++||+.+ +... .....+|...|++++|+|++++|++|+.||.|++||+.
T Consensus 63 ~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~i~vwd~~~ 142 (437)
T 3gre_A 63 PNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLTYDCSSTVTQITMIPNFDAFAVSSKDGQIIVLKVNH 142 (437)
T ss_dssp TSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCSCSEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEEEEE
T ss_pred CCceEEEEECCCCCCEEEEecCCceEEEeECcccccCcccceeeeccCCCCEEEEEEeCCCCEEEEEeCCCEEEEEEecc
Confidence 34699999999 4566666 689999999876 4422 13333688999999999999999999999999999994
Q ss_pred --CCeeeEEecC------------CCccEEEEEee----CCEEEEEeCCCcEEEEECCCCCccEEEecc--ccCCeEEEE
Q 014934 239 --RCKRVRTMEG------------HRLRVGALAWS----SSLLSSGSRDKSILQRDIRAQEDFVSKLSG--HKSEVCGLK 298 (415)
Q Consensus 239 --~~~~~~~l~~------------h~~~V~~l~~~----~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~--h~~~V~~l~ 298 (415)
+++.+..+.+ +...+.++.+. +.+|++|+.||.|++||+++.. .+..+.+ |...|.+++
T Consensus 143 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~-~~~~~~~~~h~~~v~~~~ 221 (437)
T 3gre_A 143 YQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTLE-RLQIIENSPRHGAVSSIC 221 (437)
T ss_dssp EEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTTCC-EEEEEECCGGGCCEEEEE
T ss_pred ccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCe-eeEEEccCCCCCceEEEE
Confidence 4444433321 45667777744 5799999999999999999887 5777777 899999999
Q ss_pred EeCCCCEEEEEeCCCcEEEEECCCCceeEEec-cCCCcEEEEEEcCC---CCcEEEEEcCCCCCeEEEEECCCCcEEEEe
Q 014934 299 WSYDNRELASGGNDNRLFVWNQHSTQPVLKYC-EHTAAVKAIAWSPH---LHGLLASGGGTADRCIRFWNTTTNTHLSCM 374 (415)
Q Consensus 299 ~spdg~~lasg~~dg~I~iwd~~~~~~~~~~~-~h~~~V~~l~~sp~---~~~llasggg~~d~~I~iwd~~t~~~~~~~ 374 (415)
|+|++++|++|+.||.|++||+++++++..+. .|...|.+++|+|. ...+|++++ .|+.|++||+.+++++..+
T Consensus 222 ~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~--~dg~i~iwd~~~~~~~~~~ 299 (437)
T 3gre_A 222 IDEECCVLILGTTRGIIDIWDIRFNVLIRSWSFGDHAPITHVEVCQFYGKNSVIVVGGS--SKTFLTIWNFVKGHCQYAF 299 (437)
T ss_dssp ECTTSCEEEEEETTSCEEEEETTTTEEEEEEBCTTCEEEEEEEECTTTCTTEEEEEEES--TTEEEEEEETTTTEEEEEE
T ss_pred ECCCCCEEEEEcCCCeEEEEEcCCccEEEEEecCCCCceEEEEeccccCCCccEEEEEc--CCCcEEEEEcCCCcEEEEE
Confidence 99999999999999999999999999998886 78889999988764 223777776 8999999999999988877
Q ss_pred e---------------------------CCCCEEEEEECCCCCeEEEEEecCCCcEEEEECCCCcc
Q 014934 375 D---------------------------TGSQVCNLVWSKNVNELVSTHGYSQNQIIVWRYPTMSK 413 (415)
Q Consensus 375 ~---------------------------~~~~V~~l~~s~~~~~l~s~~g~~dg~I~vw~~~s~~~ 413 (415)
. +...|.+++|+ ++++|++ |+.|+.|++||+.+++.
T Consensus 300 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~~~~l~s--~~~d~~i~~wd~~~~~~ 362 (437)
T 3gre_A 300 INSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS-NDKILLT--DEATSSIVMFSLNELSS 362 (437)
T ss_dssp ESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-TTEEEEE--EGGGTEEEEEETTCGGG
T ss_pred EcCCCCCccceecccccccccceecccccCCceEEEEEC-CceEEEe--cCCCCeEEEEECCCccc
Confidence 5 23347889999 7788888 78999999999988764
No 76
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=100.00 E-value=6.6e-30 Score=253.72 Aligned_cols=230 Identities=20% Similarity=0.398 Sum_probs=205.5
Q ss_pred cceeEeecCCCcEEEEEcCCeEEEEECCCCCeEEeEecCCCCCeEEEEEcCCCCeEEEEECCCcEEEEECCCCeeeEEec
Q 014934 168 FYLNLVDWSSHNVLAVGLGNCVYLWNACSSKVTKLCDLGIDDSVCSVGWANRNTHLAVGTSHGKVQIWDASRCKRVRTME 247 (415)
Q Consensus 168 ~~i~~l~ws~~~~la~~~d~~V~iwd~~~~~~~~~~~~~~~~~V~~v~~sp~g~~la~g~~dg~V~iwd~~~~~~~~~l~ 247 (415)
-.+.+++|....+++++.|+.|++||..+++....+. +|.+.|++++| ++++|++|+.||.|++||+.+++.+..+.
T Consensus 134 ~~v~~~~~d~~~l~~g~~dg~i~iwd~~~~~~~~~~~-~h~~~v~~l~~--~~~~l~sg~~dg~i~vwd~~~~~~~~~~~ 210 (435)
T 1p22_A 134 KGVYCLQYDDQKIVSGLRDNTIKIWDKNTLECKRILT-GHTGSVLCLQY--DERVIITGSSDSTVRVWDVNTGEMLNTLI 210 (435)
T ss_dssp CCEEEEECCSSEEEEEESSSCEEEEESSSCCEEEEEC-CCSSCEEEEEC--CSSEEEEEETTSCEEEEESSSCCEEEEEC
T ss_pred CcEEEEEECCCEEEEEeCCCeEEEEeCCCCeEEEEEc-CCCCcEEEEEE--CCCEEEEEcCCCeEEEEECCCCcEEEEEc
Confidence 3588898865556666678999999999999888776 88999999999 78999999999999999999999999999
Q ss_pred CCCccEEEEEeeCCEEEEEeCCCcEEEEECCCCCcc--EEEeccccCCeEEEEEeCCCCEEEEEeCCCcEEEEECCCCce
Q 014934 248 GHRLRVGALAWSSSLLSSGSRDKSILQRDIRAQEDF--VSKLSGHKSEVCGLKWSYDNRELASGGNDNRLFVWNQHSTQP 325 (415)
Q Consensus 248 ~h~~~V~~l~~~~~~l~sgs~dg~I~iwd~~~~~~~--~~~~~~h~~~V~~l~~spdg~~lasg~~dg~I~iwd~~~~~~ 325 (415)
+|...|.+++|+++.+++|+.||.|++||++..... ...+.+|...|.+++| ++++|++|+.||.|++||+++++.
T Consensus 211 ~h~~~v~~l~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~s~~~dg~i~vwd~~~~~~ 288 (435)
T 1p22_A 211 HHCEAVLHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWNTSTCEF 288 (435)
T ss_dssp CCCSCEEEEECCTTEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTTCCE
T ss_pred CCCCcEEEEEEcCCEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEe--CCCEEEEEeCCCeEEEEECCcCcE
Confidence 999999999999999999999999999999987633 2677899999999999 788999999999999999999999
Q ss_pred eEEeccCCCcEEEEEEcCCCCcEEEEEcCCCCCeEEEEECCCCcEEEEee-CCCCEEEEEECCCCCeEEEEEecCCCcEE
Q 014934 326 VLKYCEHTAAVKAIAWSPHLHGLLASGGGTADRCIRFWNTTTNTHLSCMD-TGSQVCNLVWSKNVNELVSTHGYSQNQII 404 (415)
Q Consensus 326 ~~~~~~h~~~V~~l~~sp~~~~llasggg~~d~~I~iwd~~t~~~~~~~~-~~~~V~~l~~s~~~~~l~s~~g~~dg~I~ 404 (415)
+..+.+|...|.+++|+ +. ++++|+ .|+.|++||+.+++++..+. +...|.+++| ++..|++ |+.||.|+
T Consensus 289 ~~~~~~~~~~v~~~~~~--~~-~l~~g~--~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~--~~~~l~s--g~~dg~i~ 359 (435)
T 1p22_A 289 VRTLNGHKRGIACLQYR--DR-LVVSGS--SDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRIVS--GAYDGKIK 359 (435)
T ss_dssp EEEEECCSSCEEEEEEE--TT-EEEEEE--TTSCEEEEETTTCCEEEEECCCSSCEEEEEC--CSSEEEE--EETTSCEE
T ss_pred EEEEcCCCCcEEEEEeC--CC-EEEEEe--CCCeEEEEECCCCCEEEEEeCCcCcEEEEEe--cCCEEEE--EeCCCcEE
Confidence 99999999999999995 33 777776 89999999999999998887 6678999999 7888888 78999999
Q ss_pred EEECCCC
Q 014934 405 VWRYPTM 411 (415)
Q Consensus 405 vw~~~s~ 411 (415)
+||+.+.
T Consensus 360 vwd~~~~ 366 (435)
T 1p22_A 360 VWDLVAA 366 (435)
T ss_dssp EEEHHHH
T ss_pred EEECCCC
Confidence 9998643
No 77
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=99.98 E-value=2.8e-30 Score=243.53 Aligned_cols=202 Identities=18% Similarity=0.340 Sum_probs=175.5
Q ss_pred CCCCCeEEEEEcCCCCeEEEEECCCcEEEEECCC--CeeeEEecCCCccEEEEEee----CCEEEEEeCCCcEEEEECCC
Q 014934 206 GIDDSVCSVGWANRNTHLAVGTSHGKVQIWDASR--CKRVRTMEGHRLRVGALAWS----SSLLSSGSRDKSILQRDIRA 279 (415)
Q Consensus 206 ~~~~~V~~v~~sp~g~~la~g~~dg~V~iwd~~~--~~~~~~l~~h~~~V~~l~~~----~~~l~sgs~dg~I~iwd~~~ 279 (415)
+|.+.|++++|+|+|++||+|+.||+|+|||+.. .+.+.++.+|.+.|.+++|+ +++|++|+.|++|++||++.
T Consensus 7 ~h~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iWd~~~ 86 (297)
T 2pm7_B 7 AHNEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMIWKEEN 86 (297)
T ss_dssp SCSSCEEEEEECTTSSEEEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEEEEBSS
T ss_pred CCcCceEEEEECCCCCEEEEEeCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEEEEcCC
Confidence 7899999999999999999999999999999974 46788999999999999996 47999999999999999987
Q ss_pred CC-ccEEEeccccCCeEEEEEeCC--CCEEEEEeCCCcEEEEECCCCc--eeEEeccCCCcEEEEEEcCCC---------
Q 014934 280 QE-DFVSKLSGHKSEVCGLKWSYD--NRELASGGNDNRLFVWNQHSTQ--PVLKYCEHTAAVKAIAWSPHL--------- 345 (415)
Q Consensus 280 ~~-~~~~~~~~h~~~V~~l~~spd--g~~lasg~~dg~I~iwd~~~~~--~~~~~~~h~~~V~~l~~sp~~--------- 345 (415)
+. ..+..+.+|...|.+++|+|+ +.+|++|+.|+.|++||++++. ....+.+|...|.+++|+|++
T Consensus 87 ~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~ 166 (297)
T 2pm7_B 87 GRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNG 166 (297)
T ss_dssp SCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEECCSSCEEEEEECCCC---------
T ss_pred CceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeeecccCccceEeecCCcccccccCCC
Confidence 64 245667889999999999997 8999999999999999998763 245677999999999999973
Q ss_pred ---CcEEEEEcCCCCCeEEEEECCCCc----EEEEee-CCCCEEEEEECCCC---CeEEEEEecCCCcEEEEECCCC
Q 014934 346 ---HGLLASGGGTADRCIRFWNTTTNT----HLSCMD-TGSQVCNLVWSKNV---NELVSTHGYSQNQIIVWRYPTM 411 (415)
Q Consensus 346 ---~~llasggg~~d~~I~iwd~~t~~----~~~~~~-~~~~V~~l~~s~~~---~~l~s~~g~~dg~I~vw~~~s~ 411 (415)
..+|++++ .|+.|++||+.+++ .+..+. |...|.+++|+|++ .+|++ |+.|+.|+||++.+.
T Consensus 167 ~~~~~~l~sgs--~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las--~s~D~~v~iWd~~~~ 239 (297)
T 2pm7_B 167 TKESRKFVTGG--ADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMAS--VSQDRTCIIWTQDNE 239 (297)
T ss_dssp ---CCEEEEEE--TTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEE--EETTSCEEEEEESST
T ss_pred CCCcceEEEEc--CCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCCceEEEE--EECCCcEEEEEeCCC
Confidence 24788887 89999999998876 444554 67889999999995 67777 779999999998763
No 78
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=99.98 E-value=6.6e-31 Score=256.60 Aligned_cols=215 Identities=20% Similarity=0.391 Sum_probs=176.1
Q ss_pred EECCCCCeEEeEecCCCCCeEEEEEcCCCCeEEEEECCCcEEEEECCCCeeeEEecCCCccEEEEEee------------
Q 014934 192 WNACSSKVTKLCDLGIDDSVCSVGWANRNTHLAVGTSHGKVQIWDASRCKRVRTMEGHRLRVGALAWS------------ 259 (415)
Q Consensus 192 wd~~~~~~~~~~~~~~~~~V~~v~~sp~g~~la~g~~dg~V~iwd~~~~~~~~~l~~h~~~V~~l~~~------------ 259 (415)
|+..+..+...+. +|.+.|++++|+|+|++|++|+.||+|+|||+.+++.+..+..|...|.+++|+
T Consensus 51 ~~~~~~~~~~~l~-gH~~~V~~~~~sp~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~h~~~v~~~~~s~~g~~las~~~d 129 (380)
T 3iz6_a 51 FNPTDLVCCRTLQ-GHSGKVYSLDWTPEKNWIVSASQDGRLIVWNALTSQKTHAIKLHCPWVMECAFAPNGQSVACGGLD 129 (380)
T ss_dssp CCCCCCEEEEEEC-CCSSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECCCTTCCCCEECTTSSEEEECCSS
T ss_pred cccceeEEeeccc-ccccEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCccceEEecCCCCEEEEEECCCCCEEEEeeCC
Confidence 3344444445554 899999999999999999999999999999999888777776666555555543
Q ss_pred -------------------------------------C---CEEEEEeCCCcEEEEECCCCCccEEEe-----ccccCCe
Q 014934 260 -------------------------------------S---SLLSSGSRDKSILQRDIRAQEDFVSKL-----SGHKSEV 294 (415)
Q Consensus 260 -------------------------------------~---~~l~sgs~dg~I~iwd~~~~~~~~~~~-----~~h~~~V 294 (415)
+ ..|++|+.|++|++||++++. .+..+ .+|...|
T Consensus 130 ~~v~iw~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~-~~~~~~~~~~~~h~~~v 208 (380)
T 3iz6_a 130 SACSIFNLSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQ-RISIFGSEFPSGHTADV 208 (380)
T ss_dssp SCCEEEECCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCC-EEEEECCCSSSSCCSCE
T ss_pred CcEEEEECCCCccccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCc-EEEEeecccCCCCccCe
Confidence 1 247777777777777777665 34444 5788999
Q ss_pred EEEEEeC-CCCEEEEEeCCCcEEEEECC-CCceeEEeccCCCcEEEEEEcCCCCcEEEEEcCCCCCeEEEEECCCCcEEE
Q 014934 295 CGLKWSY-DNRELASGGNDNRLFVWNQH-STQPVLKYCEHTAAVKAIAWSPHLHGLLASGGGTADRCIRFWNTTTNTHLS 372 (415)
Q Consensus 295 ~~l~~sp-dg~~lasg~~dg~I~iwd~~-~~~~~~~~~~h~~~V~~l~~sp~~~~llasggg~~d~~I~iwd~~t~~~~~ 372 (415)
.+++|++ ++++|++|+.|+.|++||++ ..+.+..+.+|...|.+++|+|++. +|++++ .|+.|++||+++++.+.
T Consensus 209 ~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p~~~-~l~s~s--~D~~i~lwd~~~~~~~~ 285 (380)
T 3iz6_a 209 LSLSINSLNANMFISGSCDTTVRLWDLRITSRAVRTYHGHEGDINSVKFFPDGQ-RFGTGS--DDGTCRLFDMRTGHQLQ 285 (380)
T ss_dssp EEEEECSSSCCEEEEEETTSCEEEEETTTTCCCCEEECCCSSCCCEEEECTTSS-EEEEEC--SSSCEEEEETTTTEEEE
T ss_pred EEEEeecCCCCEEEEEECCCeEEEEECCCCCcceEEECCcCCCeEEEEEecCCC-eEEEEc--CCCeEEEEECCCCcEEE
Confidence 9999987 88999999999999999998 5578889999999999999999987 777777 89999999999999888
Q ss_pred EeeCC--------CCEEEEEECCCCCeEEEEEecCCCcEEEEECCCCcc
Q 014934 373 CMDTG--------SQVCNLVWSKNVNELVSTHGYSQNQIIVWRYPTMSK 413 (415)
Q Consensus 373 ~~~~~--------~~V~~l~~s~~~~~l~s~~g~~dg~I~vw~~~s~~~ 413 (415)
.+... ..|.+++|+|+|++|++ |+.||.|++||+.+.+.
T Consensus 286 ~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~--g~~dg~i~vwd~~~~~~ 332 (380)
T 3iz6_a 286 VYNREPDRNDNELPIVTSVAFSISGRLLFA--GYSNGDCYVWDTLLAEM 332 (380)
T ss_dssp EECCCCSSSCCSSCSCSEEEECSSSSEEEE--ECTTSCEEEEETTTCCE
T ss_pred EecccccccccccCceEEEEECCCCCEEEE--EECCCCEEEEECCCCce
Confidence 77532 23889999999999999 88999999999876553
No 79
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.98 E-value=1.4e-29 Score=250.39 Aligned_cols=239 Identities=25% Similarity=0.419 Sum_probs=205.4
Q ss_pred CcceeEeecCC-CcEEEEE-cCCeEEEEECCCCCeEEeEecCCCCCeEEEEEcCCCCeEEEEECCCcEEEEECCCC-eee
Q 014934 167 DFYLNLVDWSS-HNVLAVG-LGNCVYLWNACSSKVTKLCDLGIDDSVCSVGWANRNTHLAVGTSHGKVQIWDASRC-KRV 243 (415)
Q Consensus 167 ~~~i~~l~ws~-~~~la~~-~d~~V~iwd~~~~~~~~~~~~~~~~~V~~v~~sp~g~~la~g~~dg~V~iwd~~~~-~~~ 243 (415)
..+|++|+|+| +++|++| .|+.|+|||+.+++....+. +|...|.++.| ++.+|++|+.|+.+.+||.... ..+
T Consensus 147 ~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~~~~~-~h~~~v~~~s~--~~~~l~sgs~d~~i~~~d~~~~~~~~ 223 (420)
T 4gga_A 147 GEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMT-SHSARVGSLSW--NSYILSSGSRSGHIHHHDVRVAEHHV 223 (420)
T ss_dssp TCCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEEC-CCSSCEEEEEE--ETTEEEEEETTSEEEEEETTSSSCEE
T ss_pred CCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCcEEEEEe-CCCCceEEEee--CCCEEEEEeCCCceeEeeecccceee
Confidence 45799999999 7888877 58999999999999888776 88899999887 4789999999999999998764 566
Q ss_pred EEecCCCccEEEEEee--CCEEEEEeCCCcEEEEECCCCCc---cEEEeccccCCeEEEEEeCCC-CEEEE--EeCCCcE
Q 014934 244 RTMEGHRLRVGALAWS--SSLLSSGSRDKSILQRDIRAQED---FVSKLSGHKSEVCGLKWSYDN-RELAS--GGNDNRL 315 (415)
Q Consensus 244 ~~l~~h~~~V~~l~~~--~~~l~sgs~dg~I~iwd~~~~~~---~~~~~~~h~~~V~~l~~spdg-~~las--g~~dg~I 315 (415)
..+.+|...+..+.|. +.++++++.|+.|++||...+.. .+.....|...|.+++|+|++ .++++ |+.|+.|
T Consensus 224 ~~~~~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I 303 (420)
T 4gga_A 224 ATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHI 303 (420)
T ss_dssp EEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEE
T ss_pred EEecccccceeeeeecCCCCeeeeeeccccceEEeeccccccceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEE
Confidence 7889999999999998 58999999999999999987642 356677899999999999965 45555 4579999
Q ss_pred EEEECCCCceeEEeccCCCcEEEEEEcCCCCcEEEEEcCCCCCeEEEEECCCCcEEEEee-CCCCEEEEEECCCCCeEEE
Q 014934 316 FVWNQHSTQPVLKYCEHTAAVKAIAWSPHLHGLLASGGGTADRCIRFWNTTTNTHLSCMD-TGSQVCNLVWSKNVNELVS 394 (415)
Q Consensus 316 ~iwd~~~~~~~~~~~~h~~~V~~l~~sp~~~~llasggg~~d~~I~iwd~~t~~~~~~~~-~~~~V~~l~~s~~~~~l~s 394 (415)
++||+.+++++..+..| ..+.++.|+|++..+++++ |..|+.|++||+.+++++..+. |...|.+++|+|+|++|++
T Consensus 304 ~iwd~~t~~~~~~~~~~-~~v~~~~~~~~~~~lv~~s-g~~d~~I~iwd~~~~~~v~~l~gH~~~V~~l~~spdg~~l~S 381 (420)
T 4gga_A 304 RIWNVCSGACLSAVDAH-SQVCSILWSPHYKELISGH-GFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVAS 381 (420)
T ss_dssp EEEETTTTEEEEEEECS-SCEEEEEEETTTTEEEEEE-CTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEE
T ss_pred EEEeCCccccceeeccc-cceeeeeecCCCCeEEEEE-ecCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEE
Confidence 99999999998888554 5789999999998666554 4579999999999999999887 6789999999999999999
Q ss_pred EEecCCCcEEEEECCCCc
Q 014934 395 THGYSQNQIIVWRYPTMS 412 (415)
Q Consensus 395 ~~g~~dg~I~vw~~~s~~ 412 (415)
|+.|++|+|||+....
T Consensus 382 --~s~D~tvriWdv~~~~ 397 (420)
T 4gga_A 382 --AAADETLRLWRCFELD 397 (420)
T ss_dssp --EETTTEEEEECCSCSS
T ss_pred --EecCCeEEEEECCCCC
Confidence 7789999999987643
No 80
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.98 E-value=4.1e-30 Score=256.46 Aligned_cols=235 Identities=17% Similarity=0.167 Sum_probs=200.7
Q ss_pred ceeEeecCC-CcEEEEEcCCeEEEEECCCCC---eEEeEec---------------------------------------
Q 014934 169 YLNLVDWSS-HNVLAVGLGNCVYLWNACSSK---VTKLCDL--------------------------------------- 205 (415)
Q Consensus 169 ~i~~l~ws~-~~~la~~~d~~V~iwd~~~~~---~~~~~~~--------------------------------------- 205 (415)
.+++++|++ +++|+++.++.|++||+.+++ ....+..
T Consensus 6 p~~~v~~s~dg~~l~~~~~~~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (450)
T 2vdu_B 6 PLQNLLTSRDGSLVFAIIKNCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKLKSNKGDSIK 85 (450)
T ss_dssp CCCEEEECSSSSEEEEEETTEEEEEEEETTTEEEEEEEEECCC-------------------------------------
T ss_pred cEEEEEecCCCCEEEEEeCCeEEEEECCCCCcceeeeecCCccccccccccccchhhccccccccccccccccCcCcccc
Confidence 467899999 778888899999999999998 4444331
Q ss_pred --------------CCCCCeEEEEEcCCCCeE-EEEECCCcEEEEECC--CCeeeEEec--CCCccEEEEEee--CCEEE
Q 014934 206 --------------GIDDSVCSVGWANRNTHL-AVGTSHGKVQIWDAS--RCKRVRTME--GHRLRVGALAWS--SSLLS 264 (415)
Q Consensus 206 --------------~~~~~V~~v~~sp~g~~l-a~g~~dg~V~iwd~~--~~~~~~~l~--~h~~~V~~l~~~--~~~l~ 264 (415)
+|.+.|++++|+|+|++| ++|+.||.|+|||+. +++.+..+. .|...|.+++|+ +.+|+
T Consensus 86 ~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~ 165 (450)
T 2vdu_B 86 RTAAKVPSPGLGAPPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDTTVI 165 (450)
T ss_dssp --------------CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSSEEE
T ss_pred ccCccccCCCCCCCccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCCEEE
Confidence 123369999999999996 889999999999999 888888776 577899999998 47999
Q ss_pred EEeCCCcEEEEECCCCCc---cEEEeccccCCeEEEEEeCC---CCEEEEEeCCCcEEEEECCCCceeEE-eccCCCcEE
Q 014934 265 SGSRDKSILQRDIRAQED---FVSKLSGHKSEVCGLKWSYD---NRELASGGNDNRLFVWNQHSTQPVLK-YCEHTAAVK 337 (415)
Q Consensus 265 sgs~dg~I~iwd~~~~~~---~~~~~~~h~~~V~~l~~spd---g~~lasg~~dg~I~iwd~~~~~~~~~-~~~h~~~V~ 337 (415)
+|+.||.|++|++..... ....+.+|...|.+++|+|+ +++|++|+.|+.|++||+.+++.+.. +.+|...|.
T Consensus 166 ~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~h~~~v~ 245 (450)
T 2vdu_B 166 IADKFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWLFGHKHFVS 245 (450)
T ss_dssp EEETTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEECCCCSSCEE
T ss_pred EEeCCCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeeeecCCCCceE
Confidence 999999999999987652 22366789999999999999 99999999999999999999988877 558999999
Q ss_pred EEEEcCCCCcEEEEEcCCCCCeEEEEECCCCcEEEEeeC--------------------------CCCEEEEEECCCCCe
Q 014934 338 AIAWSPHLHGLLASGGGTADRCIRFWNTTTNTHLSCMDT--------------------------GSQVCNLVWSKNVNE 391 (415)
Q Consensus 338 ~l~~sp~~~~llasggg~~d~~I~iwd~~t~~~~~~~~~--------------------------~~~V~~l~~s~~~~~ 391 (415)
+++|+ ++. +|++++ .|+.|++||+.+++++..+.. ...|..+.|+|++++
T Consensus 246 ~~~~s-d~~-~l~s~~--~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~ 321 (450)
T 2vdu_B 246 SICCG-KDY-LLLSAG--GDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPF 321 (450)
T ss_dssp EEEEC-STT-EEEEEE--SSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSSSE
T ss_pred EEEEC-CCC-EEEEEe--CCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCCCE
Confidence 99999 776 777776 899999999999998887752 246899999999999
Q ss_pred EEEEEecCCCcEEEEEC
Q 014934 392 LVSTHGYSQNQIIVWRY 408 (415)
Q Consensus 392 l~s~~g~~dg~I~vw~~ 408 (415)
|+++ +..++.|+||++
T Consensus 322 l~~~-~~~d~~i~iw~~ 337 (450)
T 2vdu_B 322 VAFF-VEATKCIIILEM 337 (450)
T ss_dssp EEEE-ETTCSEEEEEEE
T ss_pred EEEE-ECCCCeEEEEEe
Confidence 9984 237899999999
No 81
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.98 E-value=2.6e-30 Score=252.99 Aligned_cols=234 Identities=16% Similarity=0.238 Sum_probs=205.2
Q ss_pred CcceeEeecCC-CcEEEEE-cCCeEEEEECCCCCeEEeEecCCCCC---------------eEEEEEcCCCCeEEEEECC
Q 014934 167 DFYLNLVDWSS-HNVLAVG-LGNCVYLWNACSSKVTKLCDLGIDDS---------------VCSVGWANRNTHLAVGTSH 229 (415)
Q Consensus 167 ~~~i~~l~ws~-~~~la~~-~d~~V~iwd~~~~~~~~~~~~~~~~~---------------V~~v~~sp~g~~la~g~~d 229 (415)
...+.+++|+| ++.|+++ .++.|++||+.+++....+. .+... +.+++|++++ .+++++.+
T Consensus 149 ~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 226 (425)
T 1r5m_A 149 RAPIVSVKWNKDGTHIISMDVENVTILWNVISGTVMQHFE-LKETGGSSINAENHSGDGSLGVDVEWVDDD-KFVIPGPK 226 (425)
T ss_dssp CSCEEEEEECTTSSEEEEEETTCCEEEEETTTTEEEEEEC-CC---------------CCCBSCCEEEETT-EEEEECGG
T ss_pred CccEEEEEECCCCCEEEEEecCCeEEEEECCCCcEEEEee-ccccCccceeeccccCCcceeeEEEEcCCC-EEEEEcCC
Confidence 34689999999 5655555 68999999999998877765 33344 8999999875 58889999
Q ss_pred CcEEEEECCCCeeeEEecCCCccEEEEEee--CCEEEEEeCCCcEEEEECCCCCccEEEeccccCCeEEEEEeCCCCEEE
Q 014934 230 GKVQIWDASRCKRVRTMEGHRLRVGALAWS--SSLLSSGSRDKSILQRDIRAQEDFVSKLSGHKSEVCGLKWSYDNRELA 307 (415)
Q Consensus 230 g~V~iwd~~~~~~~~~l~~h~~~V~~l~~~--~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~spdg~~la 307 (415)
|.|++||+.+++.+..+..|...|.+++|+ +.+|++++.||.|++||++... ....+.+|...|.+++|+|++ +|+
T Consensus 227 g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~-~~~~~~~~~~~i~~~~~~~~~-~l~ 304 (425)
T 1r5m_A 227 GAIFVYQITEKTPTGKLIGHHGPISVLEFNDTNKLLLSASDDGTLRIWHGGNGN-SQNCFYGHSQSIVSASWVGDD-KVI 304 (425)
T ss_dssp GCEEEEETTCSSCSEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEECSSSBS-CSEEECCCSSCEEEEEEETTT-EEE
T ss_pred CeEEEEEcCCCceeeeeccCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCc-cceEecCCCccEEEEEECCCC-EEE
Confidence 999999999999999999999999999998 5799999999999999999876 567778899999999999999 999
Q ss_pred EEeCCCcEEEEECCCCceeEEeccCCCcEEEEEEcCCCCcEEEEEcCCCCCeEEEEECCCCc------------------
Q 014934 308 SGGNDNRLFVWNQHSTQPVLKYCEHTAAVKAIAWSPHLHGLLASGGGTADRCIRFWNTTTNT------------------ 369 (415)
Q Consensus 308 sg~~dg~I~iwd~~~~~~~~~~~~h~~~V~~l~~sp~~~~llasggg~~d~~I~iwd~~t~~------------------ 369 (415)
+++.|+.|++||+++++.+..+..|...|.+++|+|++. +|++++ .|+.|++||+.+++
T Consensus 305 ~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~s~~~~-~l~~~~--~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~ 381 (425)
T 1r5m_A 305 SCSMDGSVRLWSLKQNTLLALSIVDGVPIFAGRISQDGQ-KYAVAF--MDGQVNVYDLKKLNSKSRSLYGNRDGILNPLP 381 (425)
T ss_dssp EEETTSEEEEEETTTTEEEEEEECTTCCEEEEEECTTSS-EEEEEE--TTSCEEEEECHHHHC--------------CEE
T ss_pred EEeCCCcEEEEECCCCcEeEecccCCccEEEEEEcCCCC-EEEEEE--CCCeEEEEECCCCccceeeeecccccccCccc
Confidence 999999999999999999999999999999999999987 666666 79999999999888
Q ss_pred --EEEEeeCC--C-CEEEEEECCCCCeEEEEEecCCCcEEEEECC
Q 014934 370 --HLSCMDTG--S-QVCNLVWSKNVNELVSTHGYSQNQIIVWRYP 409 (415)
Q Consensus 370 --~~~~~~~~--~-~V~~l~~s~~~~~l~s~~g~~dg~I~vw~~~ 409 (415)
.+..+... . .|.+++|+|++++|++ ++.||.|++|+++
T Consensus 382 ~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~--~~~dg~i~iw~~~ 424 (425)
T 1r5m_A 382 IPLYASYQSSQDNDYIFDLSWNCAGNKISV--AYSLQEGSVVAIP 424 (425)
T ss_dssp CCEEEEECCTTCCCCEEEEEECTTSSEEEE--EESSSCCEEEECC
T ss_pred chhhhhhcCcccCCceEEEEccCCCceEEE--EecCceEEEEeec
Confidence 77777643 3 9999999999999998 7789999999986
No 82
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=99.98 E-value=9.7e-30 Score=246.12 Aligned_cols=208 Identities=15% Similarity=0.291 Sum_probs=187.2
Q ss_pred EeEecCCCCCeEEEEEcCCCCeEEEEECCCcEEEEECCCCeeeEEecCCCccEEEEEee--CCEEEEEeCCCcEEEEECC
Q 014934 201 KLCDLGIDDSVCSVGWANRNTHLAVGTSHGKVQIWDASRCKRVRTMEGHRLRVGALAWS--SSLLSSGSRDKSILQRDIR 278 (415)
Q Consensus 201 ~~~~~~~~~~V~~v~~sp~g~~la~g~~dg~V~iwd~~~~~~~~~l~~h~~~V~~l~~~--~~~l~sgs~dg~I~iwd~~ 278 (415)
..+. +|.+.|++++|+|++++||+|+.||+|+|||..+++....+..|...|.+++|+ +..|++|+.|+.|.+|++.
T Consensus 58 ~~l~-gH~~~V~~~~~s~d~~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~~~~v~~~~~sp~g~~lasg~~d~~i~v~~~~ 136 (354)
T 2pbi_B 58 RTLK-GHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCAIACGGLDNKCSVYPLT 136 (354)
T ss_dssp EEEE-CCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCEEEECTTSSEEEEESTTSEEEEEECC
T ss_pred EEec-CCCCeEEEEEECCCCCEEEEEeCCCeEEEEECCCCCcceEEecCCCCEEEEEECCCCCEEEEeeCCCCEEEEEEe
Confidence 3344 899999999999999999999999999999999999888999999999999998 5899999999999999986
Q ss_pred CCC-----ccEEEeccccCCeEEEEEeCCCCEEEEEeCCCcEEEEECCCCceeEEeccCCCcEEEEEEcCCC-CcEEEEE
Q 014934 279 AQE-----DFVSKLSGHKSEVCGLKWSYDNRELASGGNDNRLFVWNQHSTQPVLKYCEHTAAVKAIAWSPHL-HGLLASG 352 (415)
Q Consensus 279 ~~~-----~~~~~~~~h~~~V~~l~~spdg~~lasg~~dg~I~iwd~~~~~~~~~~~~h~~~V~~l~~sp~~-~~llasg 352 (415)
... .....+.+|...|.+++|+|++..|++|+.|+.|++||+++++.+..+.+|...|.+++|+|.. ..+|+++
T Consensus 137 ~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~g~~l~sg 216 (354)
T 2pbi_B 137 FDKNENMAAKKKSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSETGNTFVSG 216 (354)
T ss_dssp CCTTCCSGGGCEEEEECSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECCCSSCCEEEEE
T ss_pred ccccccccccceeeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCeEEEEEcCCCCCeEEEEEEeCCCCCEEEEE
Confidence 532 2356677899999999999999999999999999999999999999999999999999999863 2488888
Q ss_pred cCCCCCeEEEEECCCCcEEEEee-CCCCEEEEEECCCCCeEEEEEecCCCcEEEEECCCCcc
Q 014934 353 GGTADRCIRFWNTTTNTHLSCMD-TGSQVCNLVWSKNVNELVSTHGYSQNQIIVWRYPTMSK 413 (415)
Q Consensus 353 gg~~d~~I~iwd~~t~~~~~~~~-~~~~V~~l~~s~~~~~l~s~~g~~dg~I~vw~~~s~~~ 413 (415)
+ .|+.|++||+++++++..+. |...|.+++|+|++..|++ |+.|+.|++||+.+.+.
T Consensus 217 s--~Dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s--~s~D~~v~lwd~~~~~~ 274 (354)
T 2pbi_B 217 G--CDKKAMVWDMRSGQCVQAFETHESDVNSVRYYPSGDAFAS--GSDDATCRLYDLRADRE 274 (354)
T ss_dssp E--TTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEE--EETTSCEEEEETTTTEE
T ss_pred e--CCCeEEEEECCCCcEEEEecCCCCCeEEEEEeCCCCEEEE--EeCCCeEEEEECCCCcE
Confidence 7 89999999999999988886 6788999999999999998 78999999999987543
No 83
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.98 E-value=3.2e-29 Score=235.58 Aligned_cols=231 Identities=19% Similarity=0.266 Sum_probs=197.7
Q ss_pred CcceeEeecCC-CcEEEEE-cCCeEEEEECCCC---CeEEeEecCCCCCeEEEEEcCCCCeEEEEECCCcEEEEECCCCe
Q 014934 167 DFYLNLVDWSS-HNVLAVG-LGNCVYLWNACSS---KVTKLCDLGIDDSVCSVGWANRNTHLAVGTSHGKVQIWDASRCK 241 (415)
Q Consensus 167 ~~~i~~l~ws~-~~~la~~-~d~~V~iwd~~~~---~~~~~~~~~~~~~V~~v~~sp~g~~la~g~~dg~V~iwd~~~~~ 241 (415)
...+.+++|+| +++|+++ .++.|++|++... +....+. +|...|.++.| ++++|++|+.||.|++|| .++
T Consensus 59 ~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~-~~~~~i~~~~~--~~~~l~~~~~d~~i~~~d--~~~ 133 (313)
T 3odt_A 59 QGFLNSVCYDSEKELLLFGGKDTMINGVPLFATSGEDPLYTLI-GHQGNVCSLSF--QDGVVISGSWDKTAKVWK--EGS 133 (313)
T ss_dssp SSCEEEEEEETTTTEEEEEETTSCEEEEETTCCTTSCC-CEEC-CCSSCEEEEEE--ETTEEEEEETTSEEEEEE--TTE
T ss_pred CccEEEEEECCCCCEEEEecCCCeEEEEEeeecCCCCcccchh-hcccCEEEEEe--cCCEEEEEeCCCCEEEEc--CCc
Confidence 34689999999 6666666 6899999998765 3333333 78899999999 678999999999999999 677
Q ss_pred eeEEecCCCccEEEEEee---CCEEEEEeCCCcEEEEECCCCCccEEEecc-ccCCeEEEEEeCCCCEEEEEeCCCcEEE
Q 014934 242 RVRTMEGHRLRVGALAWS---SSLLSSGSRDKSILQRDIRAQEDFVSKLSG-HKSEVCGLKWSYDNRELASGGNDNRLFV 317 (415)
Q Consensus 242 ~~~~l~~h~~~V~~l~~~---~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~-h~~~V~~l~~spdg~~lasg~~dg~I~i 317 (415)
.+..+..|...|.+++|. ++.|++++.||.|++||.. .....+.. |...|.+++|+|++. |++|+.|+.|++
T Consensus 134 ~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d~~---~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~i 209 (313)
T 3odt_A 134 LVYNLQAHNASVWDAKVVSFSENKFLTASADKTIKLWQND---KVIKTFSGIHNDVVRHLAVVDDGH-FISCSNDGLIKL 209 (313)
T ss_dssp EEEEEECCSSCEEEEEEEETTTTEEEEEETTSCEEEEETT---EEEEEECSSCSSCEEEEEEEETTE-EEEEETTSEEEE
T ss_pred EEEecccCCCceeEEEEccCCCCEEEEEECCCCEEEEecC---ceEEEEeccCcccEEEEEEcCCCe-EEEccCCCeEEE
Confidence 888899999999999996 6899999999999999943 24556665 899999999999998 999999999999
Q ss_pred EECCCCceeEEeccCCCcEEEEEEcCCCCcEEEEEcCCCCCeEEEEECCCCcEEEEee-CCCCEEEEEECCCCCeEEEEE
Q 014934 318 WNQHSTQPVLKYCEHTAAVKAIAWSPHLHGLLASGGGTADRCIRFWNTTTNTHLSCMD-TGSQVCNLVWSKNVNELVSTH 396 (415)
Q Consensus 318 wd~~~~~~~~~~~~h~~~V~~l~~sp~~~~llasggg~~d~~I~iwd~~t~~~~~~~~-~~~~V~~l~~s~~~~~l~s~~ 396 (415)
||+++++.+..+..|...|.+++|+|++. +++++ .|+.|++||+.+++.+..+. +...|.+++|+|+++ +++
T Consensus 210 ~d~~~~~~~~~~~~~~~~i~~~~~~~~~~--l~~~~--~dg~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~-- 282 (313)
T 3odt_A 210 VDMHTGDVLRTYEGHESFVYCIKLLPNGD--IVSCG--EDRTVRIWSKENGSLKQVITLPAISIWSVDCMSNGD-IIV-- 282 (313)
T ss_dssp EETTTCCEEEEEECCSSCEEEEEECTTSC--EEEEE--TTSEEEEECTTTCCEEEEEECSSSCEEEEEECTTSC-EEE--
T ss_pred EECCchhhhhhhhcCCceEEEEEEecCCC--EEEEe--cCCEEEEEECCCCceeEEEeccCceEEEEEEccCCC-EEE--
Confidence 99999999999999999999999999983 45555 79999999999999988887 456899999999998 555
Q ss_pred ecCCCcEEEEECCCCcc
Q 014934 397 GYSQNQIIVWRYPTMSK 413 (415)
Q Consensus 397 g~~dg~I~vw~~~s~~~ 413 (415)
++.||.|++|++.+.+.
T Consensus 283 ~~~dg~i~iw~~~~~~~ 299 (313)
T 3odt_A 283 GSSDNLVRIFSQEKSRW 299 (313)
T ss_dssp EETTSCEEEEESCGGGC
T ss_pred EeCCCcEEEEeCCCCce
Confidence 56899999999987653
No 84
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.97 E-value=2.7e-30 Score=253.55 Aligned_cols=237 Identities=16% Similarity=0.281 Sum_probs=200.9
Q ss_pred CcceeEeecCC--CcEEEEE-cCCeEEEEECCCC-------CeEEeEecCCCCCeEEEEEcCCC-CeEEEEECCCcEEEE
Q 014934 167 DFYLNLVDWSS--HNVLAVG-LGNCVYLWNACSS-------KVTKLCDLGIDDSVCSVGWANRN-THLAVGTSHGKVQIW 235 (415)
Q Consensus 167 ~~~i~~l~ws~--~~~la~~-~d~~V~iwd~~~~-------~~~~~~~~~~~~~V~~v~~sp~g-~~la~g~~dg~V~iw 235 (415)
.-.|++++|+| +++|+++ .|+.|++|++.++ +....+. +|...|++++|+|++ .+|++|+.||.|++|
T Consensus 81 ~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~-~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iw 159 (402)
T 2aq5_A 81 TAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLE-GHTKRVGIVAWHPTAQNVLLSAGCDNVILVW 159 (402)
T ss_dssp SSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEE-CCSSCEEEEEECSSBTTEEEEEETTSCEEEE
T ss_pred CCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCccccCCceEEec-CCCCeEEEEEECcCCCCEEEEEcCCCEEEEE
Confidence 34699999998 5677776 5899999999987 3444454 789999999999998 699999999999999
Q ss_pred ECCCCeeeEEe--cCCCccEEEEEee--CCEEEEEeCCCcEEEEECCCCCccEEEe-ccccCC-eEEEEEeCCCCEEEEE
Q 014934 236 DASRCKRVRTM--EGHRLRVGALAWS--SSLLSSGSRDKSILQRDIRAQEDFVSKL-SGHKSE-VCGLKWSYDNRELASG 309 (415)
Q Consensus 236 d~~~~~~~~~l--~~h~~~V~~l~~~--~~~l~sgs~dg~I~iwd~~~~~~~~~~~-~~h~~~-V~~l~~spdg~~lasg 309 (415)
|+.+++.+..+ .+|...|.+++|+ +.+|++++.||.|++||++++. .+..+ .+|... +.++.|+|++++|++|
T Consensus 160 d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~g 238 (402)
T 2aq5_A 160 DVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSCRDKRVRVIEPRKGT-VVAEKDRPHEGTRPVHAVFVSEGKILTTG 238 (402)
T ss_dssp ETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEETTSEEEEEETTTTE-EEEEEECSSCSSSCCEEEECSTTEEEEEE
T ss_pred ECCCCCccEEEecCCCCCceEEEEECCCCCEEEEEecCCcEEEEeCCCCc-eeeeeccCCCCCcceEEEEcCCCcEEEEe
Confidence 99999999999 8899999999998 5799999999999999999887 45666 688776 8999999999999999
Q ss_pred ---eCCCcEEEEECCCCce-eEEec-cCCCcEEEEEEcCCCCcEEEEEcCCCCCeEEEEECCCCcE----EEEeeCCCCE
Q 014934 310 ---GNDNRLFVWNQHSTQP-VLKYC-EHTAAVKAIAWSPHLHGLLASGGGTADRCIRFWNTTTNTH----LSCMDTGSQV 380 (415)
Q Consensus 310 ---~~dg~I~iwd~~~~~~-~~~~~-~h~~~V~~l~~sp~~~~llasggg~~d~~I~iwd~~t~~~----~~~~~~~~~V 380 (415)
+.|+.|++||+++++. +.... .|...|.+++|+|++..++++++ .|+.|++||+.+++. +..+.+...|
T Consensus 239 ~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~g~--~dg~i~i~d~~~~~~~~~~l~~~~~~~~v 316 (402)
T 2aq5_A 239 FSRMSERQVALWDTKHLEEPLSLQELDTSSGVLLPFFDPDTNIVYLCGK--GDSSIRYFEITSEAPFLHYLSMFSSKESQ 316 (402)
T ss_dssp ECTTCCEEEEEEETTBCSSCSEEEECCCCSSCEEEEEETTTTEEEEEET--TCSCEEEEEECSSTTCEEEEEEECCSSCC
T ss_pred ccCCCCceEEEEcCccccCCceEEeccCCCceeEEEEcCCCCEEEEEEc--CCCeEEEEEecCCCcceEeecccccCCcc
Confidence 7999999999998654 33332 57788999999999997777776 799999999999873 3334456889
Q ss_pred EEEEECCCCCeEEEEEecCCCcEEEEECCCC
Q 014934 381 CNLVWSKNVNELVSTHGYSQNQIIVWRYPTM 411 (415)
Q Consensus 381 ~~l~~s~~~~~l~s~~g~~dg~I~vw~~~s~ 411 (415)
.+++|+|++..+++ .++.+++|++.+.
T Consensus 317 ~~~~~sp~~~~~~s----~~~~~~~~~l~~~ 343 (402)
T 2aq5_A 317 RGMGYMPKRGLEVN----KCEIARFYKLHER 343 (402)
T ss_dssp SEEEECCGGGSCGG----GTEEEEEEEEETT
T ss_pred cceEEeccccccee----cceeEEEEEcCCC
Confidence 99999999998875 3569999998764
No 85
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.97 E-value=3.9e-29 Score=248.58 Aligned_cols=232 Identities=19% Similarity=0.340 Sum_probs=208.7
Q ss_pred CcceeEeecCCCcEEEEEcCCeEEEEECCCCCeEEeEecCCCCCeEEEEEcCCCCeEEEEECCCcEEEEECCCCeeeEEe
Q 014934 167 DFYLNLVDWSSHNVLAVGLGNCVYLWNACSSKVTKLCDLGIDDSVCSVGWANRNTHLAVGTSHGKVQIWDASRCKRVRTM 246 (415)
Q Consensus 167 ~~~i~~l~ws~~~~la~~~d~~V~iwd~~~~~~~~~~~~~~~~~V~~v~~sp~g~~la~g~~dg~V~iwd~~~~~~~~~l 246 (415)
...+.+++|+++.+++++.|+.|++||+.+++....+. +|...|.+++| ++++|++|+.||.|++||+.+++.+..+
T Consensus 199 ~~~v~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~-~~~~~v~~~~~--~~~~l~~~~~dg~i~iwd~~~~~~~~~~ 275 (445)
T 2ovr_B 199 TSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCLHVLM-GHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTL 275 (445)
T ss_dssp SSCEEEEEEETTEEEEEETTSEEEEEESSSCCEEEEEE-CCSSCEEEEEE--CSSCEEEEETTSCEEEEEGGGTEEEEEE
T ss_pred CCcEEEEEecCCEEEEEeCCCEEEEEECCCCcEEEEEc-CCcccEEEEEE--CCCEEEEEcCCCEEEEEECCCCcEeEEe
Confidence 34688999987777777789999999999999887776 78899999999 7899999999999999999999999999
Q ss_pred cCCCccEEEEEeeCCEEEEEeCCCcEEEEECCCCCccEEEeccccCCeEEEEEeCCCCEEEEEeCCCcEEEEECCCCcee
Q 014934 247 EGHRLRVGALAWSSSLLSSGSRDKSILQRDIRAQEDFVSKLSGHKSEVCGLKWSYDNRELASGGNDNRLFVWNQHSTQPV 326 (415)
Q Consensus 247 ~~h~~~V~~l~~~~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~spdg~~lasg~~dg~I~iwd~~~~~~~ 326 (415)
.+|...|.+++|++..+++|+.||.|++||++++. .+..+.+|...+.++.++ +++|++|+.||.|++||+++++.+
T Consensus 276 ~~~~~~v~~~~~~~~~l~~~~~d~~i~i~d~~~~~-~~~~~~~~~~~v~~~~~~--~~~l~~~~~dg~i~vwd~~~~~~~ 352 (445)
T 2ovr_B 276 QGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGN-CIHTLTGHQSLTSGMELK--DNILVSGNADSTVKIWDIKTGQCL 352 (445)
T ss_dssp CCCSSCEEEEEECSSEEEEEETTSCEEEEETTTCC-EEEEECCCCSCEEEEEEE--TTEEEEEETTSCEEEEETTTCCEE
T ss_pred cCCCCceEEEEECCCEEEEEeCCCeEEEEECCCCC-EEEEEcCCcccEEEEEEe--CCEEEEEeCCCeEEEEECCCCcEE
Confidence 99999999999999999999999999999999887 578888999999988875 679999999999999999999999
Q ss_pred EEecc---CCCcEEEEEEcCCCCcEEEEEcCCCCCeEEEEECCCCcEEEEe------eCCCCEEEEEECCCCCeEEEEEe
Q 014934 327 LKYCE---HTAAVKAIAWSPHLHGLLASGGGTADRCIRFWNTTTNTHLSCM------DTGSQVCNLVWSKNVNELVSTHG 397 (415)
Q Consensus 327 ~~~~~---h~~~V~~l~~sp~~~~llasggg~~d~~I~iwd~~t~~~~~~~------~~~~~V~~l~~s~~~~~l~s~~g 397 (415)
..+.. |...|.+++|++ .++++++ .|+.|++||+.+++.+..+ .+...|.+++|+|++..|++ |
T Consensus 353 ~~~~~~~~~~~~v~~~~~~~---~~l~s~~--~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~--~ 425 (445)
T 2ovr_B 353 QTLQGPNKHQSAVTCLQFNK---NFVITSS--DDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAV--G 425 (445)
T ss_dssp EEECSTTSCSSCEEEEEECS---SEEEEEE--TTSEEEEEETTTCCEEEEEEECTTGGGTCEEEEEEECSSEEEEEE--E
T ss_pred EEEccCCCCCCCEEEEEECC---CEEEEEe--CCCeEEEEECCCCceeeeeeccccCCCCceEEEEEecCCEEEEEE--c
Confidence 99876 889999999974 3777776 8999999999999998888 35678999999999999988 7
Q ss_pred cCCCc----EEEEECCCC
Q 014934 398 YSQNQ----IIVWRYPTM 411 (415)
Q Consensus 398 ~~dg~----I~vw~~~s~ 411 (415)
+.||. |.|||+..-
T Consensus 426 ~~dg~~~~~l~v~df~~~ 443 (445)
T 2ovr_B 426 SRNGTEETKLLVLDFDVD 443 (445)
T ss_dssp CSSSSSCCEEEEEECCCC
T ss_pred ccCCCCccEEEEEECCCC
Confidence 88887 999999864
No 86
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.97 E-value=4.3e-30 Score=245.10 Aligned_cols=234 Identities=13% Similarity=0.117 Sum_probs=197.4
Q ss_pred cceeEeecCC-CcEEEEE-cCCeEEEEECCCCC----eEEeEecCCCCCeEEEEEcCCCC-eEEEEECCCcEEEEEC-CC
Q 014934 168 FYLNLVDWSS-HNVLAVG-LGNCVYLWNACSSK----VTKLCDLGIDDSVCSVGWANRNT-HLAVGTSHGKVQIWDA-SR 239 (415)
Q Consensus 168 ~~i~~l~ws~-~~~la~~-~d~~V~iwd~~~~~----~~~~~~~~~~~~V~~v~~sp~g~-~la~g~~dg~V~iwd~-~~ 239 (415)
-.|.+++|+| +.+|+++ .|+.|++|++.+++ ..... .|...|++++|+|+++ +|++|+.||.|++||+ .+
T Consensus 12 ~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~wd~~~~ 89 (342)
T 1yfq_A 12 DYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSL--RYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDLIGS 89 (342)
T ss_dssp SCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEE--ECSSCEEEEEEEESSSEEEEEEETTSCEEEECSSSS
T ss_pred CcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCccccceeee--ecCCceEEEEECCCCCcEEEEEcCCCeEEEEEeccC
Confidence 4699999999 6666665 68999999998887 43333 7889999999999999 9999999999999999 77
Q ss_pred CeeeEEecC--CCccEEEEEee-CCEEEEEeCCCcEEEEECCC---------CCccEEEeccccCCeEEEEEeCCCCEEE
Q 014934 240 CKRVRTMEG--HRLRVGALAWS-SSLLSSGSRDKSILQRDIRA---------QEDFVSKLSGHKSEVCGLKWSYDNRELA 307 (415)
Q Consensus 240 ~~~~~~l~~--h~~~V~~l~~~-~~~l~sgs~dg~I~iwd~~~---------~~~~~~~~~~h~~~V~~l~~spdg~~la 307 (415)
++. ..+.+ |...|.+++|+ ++.|++++.|+.|++||++. .. .+..+. |...|.+++|+|++ |+
T Consensus 90 ~~~-~~~~~~~~~~~v~~l~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~-~~~~~~-~~~~v~~~~~~~~~--l~ 164 (342)
T 1yfq_A 90 PSF-QALTNNEANLGICRICKYGDDKLIAASWDGLIEVIDPRNYGDGVIAVKNL-NSNNTK-VKNKIFTMDTNSSR--LI 164 (342)
T ss_dssp SSE-EECBSCCCCSCEEEEEEETTTEEEEEETTSEEEEECHHHHTTBCEEEEES-CSSSSS-SCCCEEEEEECSSE--EE
T ss_pred Cce-EeccccCCCCceEEEEeCCCCEEEEEcCCCeEEEEcccccccccccccCC-eeeEEe-eCCceEEEEecCCc--EE
Confidence 654 67888 99999999999 69999999999999999986 43 333444 88999999999887 99
Q ss_pred EEeCCCcEEEEECCC-Cc--eeEEeccCCCcEEEEEEcC-CCCcEEEEEcCCCCCeEEEEECCCC------cEEEEee-C
Q 014934 308 SGGNDNRLFVWNQHS-TQ--PVLKYCEHTAAVKAIAWSP-HLHGLLASGGGTADRCIRFWNTTTN------THLSCMD-T 376 (415)
Q Consensus 308 sg~~dg~I~iwd~~~-~~--~~~~~~~h~~~V~~l~~sp-~~~~llasggg~~d~~I~iwd~~t~------~~~~~~~-~ 376 (415)
+++.|+.|++||+++ +. .......|...|.+++|+| ++. ++++++ .|+.|++|++..+ +.+..+. +
T Consensus 165 ~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~-~l~~~~--~dg~i~i~~~~~~~~~~~~~~~~~~~~~ 241 (342)
T 1yfq_A 165 VGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQE-GYACSS--IDGRVAVEFFDDQGDDYNSSKRFAFRCH 241 (342)
T ss_dssp EEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGC-EEEEEE--TTSEEEEEECCTTCCSTTCTTCEEEECC
T ss_pred EEeCCCeEEEEECCccccccceeeecCCCCceeEEEECCCCCC-EEEEEe--cCCcEEEEEEcCCCcccccccceeeecc
Confidence 999999999999988 54 3334457889999999999 887 666666 7999999999886 6666665 3
Q ss_pred C---------CCEEEEEECCCCCeEEEEEecCCCcEEEEECCCCcc
Q 014934 377 G---------SQVCNLVWSKNVNELVSTHGYSQNQIIVWRYPTMSK 413 (415)
Q Consensus 377 ~---------~~V~~l~~s~~~~~l~s~~g~~dg~I~vw~~~s~~~ 413 (415)
. ..|.+++|+|++++|++ |+.||.|++||+.+++.
T Consensus 242 ~~~~~~~~~~~~i~~~~~s~~~~~l~~--~~~dg~i~vwd~~~~~~ 285 (342)
T 1yfq_A 242 RLNLKDTNLAYPVNSIEFSPRHKFLYT--AGSDGIISCWNLQTRKK 285 (342)
T ss_dssp CCCTTCCSSCCCEEEEEECTTTCCEEE--EETTSCEEEEETTTTEE
T ss_pred cccccccccceeEEEEEEcCCCCEEEE--ecCCceEEEEcCccHhH
Confidence 2 38999999999999998 77899999999998764
No 87
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.97 E-value=1.1e-30 Score=265.67 Aligned_cols=234 Identities=11% Similarity=0.083 Sum_probs=188.9
Q ss_pred ceeEeecCCC-------cEEEEE-cCCeEEEEECCCCCeE-----------EeEecCCCCCeEEEEEcCCCCeEEEEECC
Q 014934 169 YLNLVDWSSH-------NVLAVG-LGNCVYLWNACSSKVT-----------KLCDLGIDDSVCSVGWANRNTHLAVGTSH 229 (415)
Q Consensus 169 ~i~~l~ws~~-------~~la~~-~d~~V~iwd~~~~~~~-----------~~~~~~~~~~V~~v~~sp~g~~la~g~~d 229 (415)
.|+.++|+|. .+||++ .|++|+|||+.+++.. ..+. +|...|++++|++++ .||+|+.|
T Consensus 209 ~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~-~h~~~v~sv~~s~~~-~lasgs~D 286 (524)
T 2j04_B 209 EVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLS-LADSLITTFDFLSPT-TVVCGFKN 286 (524)
T ss_dssp SEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEEC-CTTTCEEEEEESSSS-EEEEEETT
T ss_pred cEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEE-cCCCCEEEEEecCCC-eEEEEeCC
Confidence 4889999984 577766 6899999999876421 1222 688999999999864 89999999
Q ss_pred CcEEEEECCCCe-eeEEecCCCccEEEE--Eee--C-CEEEEEeCCCcEEEEECCCCCccEEEeccccC--CeEEEEEeC
Q 014934 230 GKVQIWDASRCK-RVRTMEGHRLRVGAL--AWS--S-SLLSSGSRDKSILQRDIRAQEDFVSKLSGHKS--EVCGLKWSY 301 (415)
Q Consensus 230 g~V~iwd~~~~~-~~~~l~~h~~~V~~l--~~~--~-~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~--~V~~l~~sp 301 (415)
|+|++||+.++. ....+.+|...|.+| +|+ + .+|++|+.|++|++||+++.. ....+.+|.. .|.+++|+|
T Consensus 287 gtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~-~~~~~~~~~~~~~v~~v~fsp 365 (524)
T 2j04_B 287 GFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIA-TTKTTVSRFRGSNLVPVVYCP 365 (524)
T ss_dssp SEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHH-HHCEEEEECSCCSCCCEEEET
T ss_pred CEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCC-cccccccccccCcccceEeCC
Confidence 999999998764 456688999999999 455 3 689999999999999999876 3445556653 588999999
Q ss_pred CCCEEEEEeCCCcEEEEECCCCceeEEeccCCCcEEEEEEcCCCCcEEEEEcCCCCCeEEEEECCCC-----c-------
Q 014934 302 DNRELASGGNDNRLFVWNQHSTQPVLKYCEHTAAVKAIAWSPHLHGLLASGGGTADRCIRFWNTTTN-----T------- 369 (415)
Q Consensus 302 dg~~lasg~~dg~I~iwd~~~~~~~~~~~~h~~~V~~l~~sp~~~~llasggg~~d~~I~iwd~~t~-----~------- 369 (415)
+++.||+++.|+.|++||++++..+..+.+|.+.|.+|+|+|+++ +|++|+ .|++|++||+..+ +
T Consensus 366 ~~~~l~s~~~d~tv~lwd~~~~~~~~~l~gH~~~V~sva~Sp~g~-~l~Sgs--~Dgtv~lwd~~~~~~~~~~~~~~~~~ 442 (524)
T 2j04_B 366 QIYSYIYSDGASSLRAVPSRAAFAVHPLVSRETTITAIGVSRLHP-MVLAGS--ADGSLIITNAARRLLHGIKNSSATQK 442 (524)
T ss_dssp TTTEEEEECSSSEEEEEETTCTTCCEEEEECSSCEEEEECCSSCC-BCEEEE--TTTEEECCBSCSSTTTCC------CC
T ss_pred CcCeEEEeCCCCcEEEEECcccccceeeecCCCceEEEEeCCCCC-eEEEEE--CCCEEEEEechHhhccccccCcccee
Confidence 999999999999999999999998888989999999999999998 666776 8999999986321 0
Q ss_pred --EEEE------------------------------e-eCCCCEEEEEECCCCC---eEEEEEecCCCcEEEEECCC
Q 014934 370 --HLSC------------------------------M-DTGSQVCNLVWSKNVN---ELVSTHGYSQNQIIVWRYPT 410 (415)
Q Consensus 370 --~~~~------------------------------~-~~~~~V~~l~~s~~~~---~l~s~~g~~dg~I~vw~~~s 410 (415)
.+.. + .+...|.+++|+|++. .|++ |+.+|.|+||++.-
T Consensus 443 ~~~v~~v~~sp~g~~~~~~~~~~~~~~~~~g~~~~~l~gh~~~V~~Vafsp~~~~~~~lAs--g~~~g~vrlw~l~~ 517 (524)
T 2j04_B 443 SLRLWKWDYSIKDDKYRIDSSYEVYPLTVNDVSKAKIDAHGINITCTKWNETSAGGKCYAF--SNSAGLLTLEYLSL 517 (524)
T ss_dssp CCEEEECBCCSSSCEEEECCCCCCCC-------------CCCSCCCEEECCSTTTTTEEEE--ECTTSEEEEEECSC
T ss_pred eeEEEEeccCCCCCeEEccCCceecccccCCcceeeecCCCceEEEEECCCCCCccHHHHh--hccCceEEEEEccc
Confidence 0101 1 1345688999999965 7777 88999999999863
No 88
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.97 E-value=1.2e-29 Score=243.50 Aligned_cols=234 Identities=20% Similarity=0.304 Sum_probs=188.3
Q ss_pred CcceeEeecCCC----cEEEEE-cCCeEEEEECCC-CCeEEeEecCCCCCeEEEEEcCCCCeEEEEECCCcEEEEECCCC
Q 014934 167 DFYLNLVDWSSH----NVLAVG-LGNCVYLWNACS-SKVTKLCDLGIDDSVCSVGWANRNTHLAVGTSHGKVQIWDASRC 240 (415)
Q Consensus 167 ~~~i~~l~ws~~----~~la~~-~d~~V~iwd~~~-~~~~~~~~~~~~~~V~~v~~sp~g~~la~g~~dg~V~iwd~~~~ 240 (415)
.-.|++++|+|. ++|+++ .|+.|++|++.+ +........+|...|++++|+|++++|++|+.||.|++||+.++
T Consensus 39 ~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~ 118 (368)
T 3mmy_A 39 DDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLSSN 118 (368)
T ss_dssp SSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEETTTT
T ss_pred CCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEcCCCcEEEEEcCCC
Confidence 346999999995 677777 579999999987 55542222378999999999999999999999999999999998
Q ss_pred eeeEEecCCCccEEEEEe--e--CCEEEEEeCCCcEEEEECCCCCccEEEeccc--------------------------
Q 014934 241 KRVRTMEGHRLRVGALAW--S--SSLLSSGSRDKSILQRDIRAQEDFVSKLSGH-------------------------- 290 (415)
Q Consensus 241 ~~~~~l~~h~~~V~~l~~--~--~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h-------------------------- 290 (415)
+.+. +..|...|.+++| + +.+|++++.||.|++||+++... +..+..|
T Consensus 119 ~~~~-~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 196 (368)
T 3mmy_A 119 QAIQ-IAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNP-MMVLQLPERCYCADVIYPMAVVATAERGLIVYQ 196 (368)
T ss_dssp EEEE-EEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSC-SEEEECSSCEEEEEEETTEEEEEEGGGCEEEEE
T ss_pred Ccee-eccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcE-EEEEecCCCceEEEecCCeeEEEeCCCcEEEEE
Confidence 8776 5569999999999 5 46799999999999999988762 3333322
Q ss_pred ---------------cCCeEEEEEeCCCCE----EEEEeCCCcEEEEECCCC---ceeEEeccCCC------------cE
Q 014934 291 ---------------KSEVCGLKWSYDNRE----LASGGNDNRLFVWNQHST---QPVLKYCEHTA------------AV 336 (415)
Q Consensus 291 ---------------~~~V~~l~~spdg~~----lasg~~dg~I~iwd~~~~---~~~~~~~~h~~------------~V 336 (415)
...+.++.+.++... +++|+.|+.|++||++.. ..+..+..|.. .|
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 276 (368)
T 3mmy_A 197 LENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAV 276 (368)
T ss_dssp CSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESSCSCHHHHSEEEECSEEC----CCCEEECCE
T ss_pred eccccchhhhccccccCCCceEEEcccCCCCCCeEEEecCCCcEEEEecCCCCccccceeeeeeecccccccccccccce
Confidence 234455555554443 999999999999999887 56778878876 79
Q ss_pred EEEEEcCCCCcEEEEEcCCCCCeEEEEECCCCcEEEEee-CCCCEEEEEECCCCCeEEEEEecCCCcEEEEE
Q 014934 337 KAIAWSPHLHGLLASGGGTADRCIRFWNTTTNTHLSCMD-TGSQVCNLVWSKNVNELVSTHGYSQNQIIVWR 407 (415)
Q Consensus 337 ~~l~~sp~~~~llasggg~~d~~I~iwd~~t~~~~~~~~-~~~~V~~l~~s~~~~~l~s~~g~~dg~I~vw~ 407 (415)
.+++|+|+++ +|++++ .|+.|++||+.+++++..+. +...|.+++|+|++++|++ ++.|+..+.|+
T Consensus 277 ~~~~~sp~~~-~l~s~~--~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~--~s~d~~~~~~~ 343 (368)
T 3mmy_A 277 NGIAFHPVHG-TLATVG--SDGRFSFWDKDARTKLKTSEQLDQPISACCFNHNGNIFAY--ASSYDWSKGHE 343 (368)
T ss_dssp EEEEECTTTC-CEEEEE--TTSCEEEEETTTTEEEEECCCCSSCEEEEEECTTSSCEEE--EECCCSTTCGG
T ss_pred EEEEEecCCC-EEEEEc--cCCeEEEEECCCCcEEEEecCCCCCceEEEECCCCCeEEE--Eeccccccccc
Confidence 9999999987 556665 79999999999999998886 5788999999999999999 55565443333
No 89
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.97 E-value=5.6e-29 Score=247.48 Aligned_cols=231 Identities=22% Similarity=0.372 Sum_probs=204.6
Q ss_pred cceeEeecCCCcEEEEEcCCeEEEEECCCCCeEEeEecCCCCCeEEEEEcCCCCeEEEEECCCcEEEEECCCCeeeEEec
Q 014934 168 FYLNLVDWSSHNVLAVGLGNCVYLWNACSSKVTKLCDLGIDDSVCSVGWANRNTHLAVGTSHGKVQIWDASRCKRVRTME 247 (415)
Q Consensus 168 ~~i~~l~ws~~~~la~~~d~~V~iwd~~~~~~~~~~~~~~~~~V~~v~~sp~g~~la~g~~dg~V~iwd~~~~~~~~~l~ 247 (415)
..+.++.++.+.+++++.|+.|++||+.+++....+. +|...|.+++|+ +++|++|+.||.|++||+.+++.+..+.
T Consensus 120 ~v~~~~~~~g~~l~sg~~dg~i~vwd~~~~~~~~~~~-~h~~~v~~~~~~--~~~l~s~~~dg~i~vwd~~~~~~~~~~~ 196 (445)
T 2ovr_B 120 HVITCLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLV-GHTGGVWSSQMR--DNIIISGSTDRTLKVWNAETGECIHTLY 196 (445)
T ss_dssp SCEEEEEEETTEEEEEETTSCEEEEETTTCCEEEECC-CCSSCEEEEEEE--TTEEEEEETTSCEEEEETTTTEEEEEEC
T ss_pred CcEEEEEEcCCEEEEEECCCcEEEEECCCCcEEEEEc-CCCCCEEEEEec--CCEEEEEeCCCeEEEEECCcCcEEEEEC
Confidence 3467888875555555678999999999999887776 899999999997 6799999999999999999999999999
Q ss_pred CCCccEEEEEeeCCEEEEEeCCCcEEEEECCCCCccEEEeccccCCeEEEEEeCCCCEEEEEeCCCcEEEEECCCCceeE
Q 014934 248 GHRLRVGALAWSSSLLSSGSRDKSILQRDIRAQEDFVSKLSGHKSEVCGLKWSYDNRELASGGNDNRLFVWNQHSTQPVL 327 (415)
Q Consensus 248 ~h~~~V~~l~~~~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~spdg~~lasg~~dg~I~iwd~~~~~~~~ 327 (415)
+|...|.+++|+++.+++|+.||.|++||++++. .+..+.+|...|.+++| ++++|++|+.||.|++||+++++.+.
T Consensus 197 ~h~~~v~~~~~~~~~l~s~s~dg~i~~wd~~~~~-~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~iwd~~~~~~~~ 273 (445)
T 2ovr_B 197 GHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQ-CLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLH 273 (445)
T ss_dssp CCSSCEEEEEEETTEEEEEETTSEEEEEESSSCC-EEEEEECCSSCEEEEEE--CSSCEEEEETTSCEEEEEGGGTEEEE
T ss_pred CCCCcEEEEEecCCEEEEEeCCCEEEEEECCCCc-EEEEEcCCcccEEEEEE--CCCEEEEEcCCCEEEEEECCCCcEeE
Confidence 9999999999999999999999999999999887 57788899999999999 78899999999999999999999999
Q ss_pred EeccCCCcEEEEEEcCCCCcEEEEEcCCCCCeEEEEECCCCcEEEEee-CCCCEEEEEECCCCCeEEEEEecCCCcEEEE
Q 014934 328 KYCEHTAAVKAIAWSPHLHGLLASGGGTADRCIRFWNTTTNTHLSCMD-TGSQVCNLVWSKNVNELVSTHGYSQNQIIVW 406 (415)
Q Consensus 328 ~~~~h~~~V~~l~~sp~~~~llasggg~~d~~I~iwd~~t~~~~~~~~-~~~~V~~l~~s~~~~~l~s~~g~~dg~I~vw 406 (415)
.+.+|...|.+++| ++. .+++++ .|+.|++||+.+++.+..+. +...+.++.+ +++.|++ |+.||.|++|
T Consensus 274 ~~~~~~~~v~~~~~--~~~-~l~~~~--~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~--~~~dg~i~vw 344 (445)
T 2ovr_B 274 TLQGHTNRVYSLQF--DGI-HVVSGS--LDTSIRVWDVETGNCIHTLTGHQSLTSGMEL--KDNILVS--GNADSTVKIW 344 (445)
T ss_dssp EECCCSSCEEEEEE--CSS-EEEEEE--TTSCEEEEETTTCCEEEEECCCCSCEEEEEE--ETTEEEE--EETTSCEEEE
T ss_pred EecCCCCceEEEEE--CCC-EEEEEe--CCCeEEEEECCCCCEEEEEcCCcccEEEEEE--eCCEEEE--EeCCCeEEEE
Confidence 99999999999999 454 667766 79999999999999988886 5567888777 4668888 7789999999
Q ss_pred ECCCCcc
Q 014934 407 RYPTMSK 413 (415)
Q Consensus 407 ~~~s~~~ 413 (415)
|+.+++.
T Consensus 345 d~~~~~~ 351 (445)
T 2ovr_B 345 DIKTGQC 351 (445)
T ss_dssp ETTTCCE
T ss_pred ECCCCcE
Confidence 9988764
No 90
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.97 E-value=2.1e-30 Score=275.25 Aligned_cols=239 Identities=22% Similarity=0.353 Sum_probs=202.3
Q ss_pred cceeEeecCC-CcEEEEE-cCCeEEEEECCCC--CeEEeEecCCCCCeEEEEEcCC--CCeEEEEECCCcEEEEECCCCe
Q 014934 168 FYLNLVDWSS-HNVLAVG-LGNCVYLWNACSS--KVTKLCDLGIDDSVCSVGWANR--NTHLAVGTSHGKVQIWDASRCK 241 (415)
Q Consensus 168 ~~i~~l~ws~-~~~la~~-~d~~V~iwd~~~~--~~~~~~~~~~~~~V~~v~~sp~--g~~la~g~~dg~V~iwd~~~~~ 241 (415)
-.|++++|+| +++|++| .|+.|++|++.++ +....+. +|.+.|++++|+++ +++|++|+.||.|++||+.+++
T Consensus 10 ~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~~~~~~~l~-~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~~~~~ 88 (753)
T 3jro_A 10 ELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLT-GHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGR 88 (753)
T ss_dssp CCEEEECCCSSSCCEEEEETTTEEEEEEEETTEEEEEEEEC-CCSSCEEEEEECCTTSCSEEEEEETTSCEEEEEEETTE
T ss_pred ceeEEEEECCCCCeEEEEECCCcEEEEecCCCCCccceecc-CCcCceEEEEecCCCCCCEEEEEeCCCeEEEEECCCCc
Confidence 3699999999 6666666 6899999999854 3343443 78999999999988 9999999999999999999886
Q ss_pred --eeEEecCCCccEEEEEee----CCEEEEEeCCCcEEEEECCCCC-ccEEEeccccCCeEEEEEeC-------------
Q 014934 242 --RVRTMEGHRLRVGALAWS----SSLLSSGSRDKSILQRDIRAQE-DFVSKLSGHKSEVCGLKWSY------------- 301 (415)
Q Consensus 242 --~~~~l~~h~~~V~~l~~~----~~~l~sgs~dg~I~iwd~~~~~-~~~~~~~~h~~~V~~l~~sp------------- 301 (415)
.+..+.+|...|.+++|+ +..+++|+.||.|++||++... .....+.+|...|.+++|+|
T Consensus 89 ~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~~~~~~~~~~~~ 168 (753)
T 3jro_A 89 WSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTK 168 (753)
T ss_dssp EEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEECCSSCEEEEEECCCC---------CG
T ss_pred ccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEeecCCCceEEEEecCcccccccccccCC
Confidence 777888999999999998 4599999999999999998873 23456678999999999999
Q ss_pred CCCEEEEEeCCCcEEEEECCCC----ceeEEeccCCCcEEEEEEcCCC--CcEEEEEcCCCCCeEEEEECCCCcE-----
Q 014934 302 DNRELASGGNDNRLFVWNQHST----QPVLKYCEHTAAVKAIAWSPHL--HGLLASGGGTADRCIRFWNTTTNTH----- 370 (415)
Q Consensus 302 dg~~lasg~~dg~I~iwd~~~~----~~~~~~~~h~~~V~~l~~sp~~--~~llasggg~~d~~I~iwd~~t~~~----- 370 (415)
++.+|++|+.||.|++||++++ ..+..+.+|...|.+++|+|++ ..++++++ .|+.|++||+.+++.
T Consensus 169 d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s--~Dg~I~iwd~~~~~~~~~~~ 246 (753)
T 3jro_A 169 ESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVS--QDRTCIIWTQDNEQGPWKKT 246 (753)
T ss_dssp GGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEE--SSSCEEEEEESSSSSCCBCC
T ss_pred CCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCCEEEEEe--cCCEEEEecCCCCCCcceeE
Confidence 5899999999999999999877 5567788999999999999993 34777776 899999999998742
Q ss_pred -EEEeeCCCCEEEEEECCCCCeEEEEEecCCCcEEEEECCCC
Q 014934 371 -LSCMDTGSQVCNLVWSKNVNELVSTHGYSQNQIIVWRYPTM 411 (415)
Q Consensus 371 -~~~~~~~~~V~~l~~s~~~~~l~s~~g~~dg~I~vw~~~s~ 411 (415)
.....+...|.+++|+|++++|++ |+.||.|++|++...
T Consensus 247 ~~~~~~~~~~v~~l~~spdg~~l~s--~s~Dg~I~vwd~~~~ 286 (753)
T 3jro_A 247 LLKEEKFPDVLWRASWSLSGNVLAL--SGGDNKVTLWKENLE 286 (753)
T ss_dssp BSSSSCCSSCCCCEEECTTTCCEEE--ECSSSCEECCBCCSS
T ss_pred EeccCCCCCceEEEEEcCCCCEEEE--EcCCCEEEEEecCCC
Confidence 111225678999999999999999 778999999999853
No 91
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.97 E-value=2.9e-29 Score=279.58 Aligned_cols=237 Identities=21% Similarity=0.313 Sum_probs=210.9
Q ss_pred CcceeEeecCC-CcEEEEE-cCCeEEEEECCCCCeEEeEecCCCCCeEEEEEcCCCCeEEEEECCCcEEEEECCCCeeeE
Q 014934 167 DFYLNLVDWSS-HNVLAVG-LGNCVYLWNACSSKVTKLCDLGIDDSVCSVGWANRNTHLAVGTSHGKVQIWDASRCKRVR 244 (415)
Q Consensus 167 ~~~i~~l~ws~-~~~la~~-~d~~V~iwd~~~~~~~~~~~~~~~~~V~~v~~sp~g~~la~g~~dg~V~iwd~~~~~~~~ 244 (415)
.-.|++++|+| +.+|+++ .|+.|++||..+++....+. +|.+.|++++|+|+|++||+|+.||.|++||+.+++.+.
T Consensus 615 ~~~v~~~~~s~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~-~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~~~~~~~ 693 (1249)
T 3sfz_A 615 TDAVYHACFSQDGQRIASCGADKTLQVFKAETGEKLLDIK-AHEDEVLCCAFSSDDSYIATCSADKKVKIWDSATGKLVH 693 (1249)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEEC-CCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEE
T ss_pred cccEEEEEECCCCCEEEEEeCCCeEEEEECCCCCEEEEec-cCCCCEEEEEEecCCCEEEEEeCCCeEEEEECCCCceEE
Confidence 34699999999 7777776 57999999999999887776 899999999999999999999999999999999999999
Q ss_pred EecCCCccEEEEEeeC----CEEEEEeCCCcEEEEECCCCCccEEEeccccCCeEEEEEeCCCCEEEEEeCCCcEEEEEC
Q 014934 245 TMEGHRLRVGALAWSS----SLLSSGSRDKSILQRDIRAQEDFVSKLSGHKSEVCGLKWSYDNRELASGGNDNRLFVWNQ 320 (415)
Q Consensus 245 ~l~~h~~~V~~l~~~~----~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~spdg~~lasg~~dg~I~iwd~ 320 (415)
.+.+|...|.+++|++ .++++|+.|+.|++||++++. ....+.+|...|.+++|+|++++|++|+.||.|++||+
T Consensus 694 ~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~-~~~~~~~h~~~v~~~~~sp~~~~l~s~s~dg~v~vwd~ 772 (1249)
T 3sfz_A 694 TYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKE-CRNTMFGHTNSVNHCRFSPDDELLASCSADGTLRLWDV 772 (1249)
T ss_dssp EEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSS-EEEEECCCSSCEEEEEECSSTTEEEEEESSSEEEEEEG
T ss_pred EEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcc-hhheecCCCCCEEEEEEecCCCEEEEEECCCeEEEEeC
Confidence 9999999999999974 489999999999999999887 67888999999999999999999999999999999998
Q ss_pred CCCceeEEe-------------------------------------------------------ccCCCcEEEEEEcCCC
Q 014934 321 HSTQPVLKY-------------------------------------------------------CEHTAAVKAIAWSPHL 345 (415)
Q Consensus 321 ~~~~~~~~~-------------------------------------------------------~~h~~~V~~l~~sp~~ 345 (415)
.+++....+ .+|...|.+++|+|++
T Consensus 773 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~sp~~ 852 (1249)
T 3sfz_A 773 RSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGHHSTIQYCDFSPYD 852 (1249)
T ss_dssp GGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEETTEEEEEETTTCCEEEEEECSSSSCCCEEEECSST
T ss_pred CCCcccceecccccccccCCccccccceEEEEEECCCCCEEEEEcCCcEEEEEecCCCceeEEcCCCCCceEEEEEcCCC
Confidence 766433322 1678889999999998
Q ss_pred CcEEEEEcCCCCCeEEEEECCCCcEEEEee-CCCCEEEEEECCCCCeEEEEEecCCCcEEEEECCC
Q 014934 346 HGLLASGGGTADRCIRFWNTTTNTHLSCMD-TGSQVCNLVWSKNVNELVSTHGYSQNQIIVWRYPT 410 (415)
Q Consensus 346 ~~llasggg~~d~~I~iwd~~t~~~~~~~~-~~~~V~~l~~s~~~~~l~s~~g~~dg~I~vw~~~s 410 (415)
. ++++++ .|+.|++||+.++..+..+. +...|.+++|+|+++.|++ ++.|+.|++|++.+
T Consensus 853 ~-~l~~~~--~dg~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~s--~s~dg~v~vw~~~~ 913 (1249)
T 3sfz_A 853 H-LAVIAL--SQYCVELWNIDSRLKVADCRGHLSWVHGVMFSPDGSSFLT--ASDDQTIRVWETKK 913 (1249)
T ss_dssp T-EEEEEC--SSSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEE--EETTSCEEEEEHHH
T ss_pred C-EEEEEe--CCCeEEEEEcCCCceeeecCCCccceEEEEECCCCCEEEE--EeCCCeEEEEEccc
Confidence 7 666665 79999999999999888776 6678999999999999998 77899999999753
No 92
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.97 E-value=2.1e-29 Score=250.06 Aligned_cols=231 Identities=19% Similarity=0.371 Sum_probs=198.3
Q ss_pred CcceeEeecCCCcEEEEEcCCeEEEEECCCCCeEEeEecCCCCCeEEEEEcCCCCeEEEEECCCcEEEEECCCCeee---
Q 014934 167 DFYLNLVDWSSHNVLAVGLGNCVYLWNACSSKVTKLCDLGIDDSVCSVGWANRNTHLAVGTSHGKVQIWDASRCKRV--- 243 (415)
Q Consensus 167 ~~~i~~l~ws~~~~la~~~d~~V~iwd~~~~~~~~~~~~~~~~~V~~v~~sp~g~~la~g~~dg~V~iwd~~~~~~~--- 243 (415)
...|.+++|+...+++++.|+.|++||+.+++....+. +|...|.+++|+ +.+|++|+.||.|++||+.+++.+
T Consensus 173 ~~~v~~l~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~-~h~~~v~~l~~~--~~~l~s~s~dg~i~vwd~~~~~~~~~~ 249 (435)
T 1p22_A 173 TGSVLCLQYDERVIITGSSDSTVRVWDVNTGEMLNTLI-HHCEAVLHLRFN--NGMMVTCSKDRSIAVWDMASPTDITLR 249 (435)
T ss_dssp SSCEEEEECCSSEEEEEETTSCEEEEESSSCCEEEEEC-CCCSCEEEEECC--TTEEEEEETTSCEEEEECSSSSCCEEE
T ss_pred CCcEEEEEECCCEEEEEcCCCeEEEEECCCCcEEEEEc-CCCCcEEEEEEc--CCEEEEeeCCCcEEEEeCCCCCCceee
Confidence 34689999955555555578999999999999887776 788999999997 459999999999999999887655
Q ss_pred EEecCCCccEEEEEeeCCEEEEEeCCCcEEEEECCCCCccEEEeccccCCeEEEEEeCCCCEEEEEeCCCcEEEEECCCC
Q 014934 244 RTMEGHRLRVGALAWSSSLLSSGSRDKSILQRDIRAQEDFVSKLSGHKSEVCGLKWSYDNRELASGGNDNRLFVWNQHST 323 (415)
Q Consensus 244 ~~l~~h~~~V~~l~~~~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~spdg~~lasg~~dg~I~iwd~~~~ 323 (415)
..+.+|...|.+++|++++|++|+.||.|++||++++. .+..+.+|...|.++.|+ +++|++|+.||.|++||++++
T Consensus 250 ~~~~~~~~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~-~~~~~~~~~~~v~~~~~~--~~~l~~g~~dg~i~iwd~~~~ 326 (435)
T 1p22_A 250 RVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCE-FVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECG 326 (435)
T ss_dssp EEECCCSSCEEEEEEETTEEEEEETTSEEEEEETTTCC-EEEEEECCSSCEEEEEEE--TTEEEEEETTSCEEEEETTTC
T ss_pred eEecCCCCcEEEEEeCCCEEEEEeCCCeEEEEECCcCc-EEEEEcCCCCcEEEEEeC--CCEEEEEeCCCeEEEEECCCC
Confidence 67789999999999999999999999999999999887 678888999999999994 789999999999999999999
Q ss_pred ceeEEeccCCCcEEEEEEcCCCCcEEEEEcCCCCCeEEEEECCCCc---------EEEEee-CCCCEEEEEECCCCCeEE
Q 014934 324 QPVLKYCEHTAAVKAIAWSPHLHGLLASGGGTADRCIRFWNTTTNT---------HLSCMD-TGSQVCNLVWSKNVNELV 393 (415)
Q Consensus 324 ~~~~~~~~h~~~V~~l~~sp~~~~llasggg~~d~~I~iwd~~t~~---------~~~~~~-~~~~V~~l~~s~~~~~l~ 393 (415)
+++..+.+|...|.+++| ++. ++++|+ .||.|++||+.+++ ++..+. +...|.+++| ++..|+
T Consensus 327 ~~~~~~~~h~~~v~~~~~--~~~-~l~sg~--~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~--~~~~l~ 399 (435)
T 1p22_A 327 ACLRVLEGHEELVRCIRF--DNK-RIVSGA--YDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQF--DEFQIV 399 (435)
T ss_dssp CEEEEECCCSSCEEEEEC--CSS-EEEEEE--TTSCEEEEEHHHHTSTTSCTTTTEEEEECCCSSCCCCEEE--CSSCEE
T ss_pred CEEEEEeCCcCcEEEEEe--cCC-EEEEEe--CCCcEEEEECCCCCCccccccchheeeccCCCCCeEEEEe--CCCEEE
Confidence 999999999999999999 444 777776 89999999997765 666664 6778999999 778888
Q ss_pred EEEecCCCcEEEEECCCCc
Q 014934 394 STHGYSQNQIIVWRYPTMS 412 (415)
Q Consensus 394 s~~g~~dg~I~vw~~~s~~ 412 (415)
+ |+.||.|++||+.+..
T Consensus 400 s--~s~Dg~i~iwd~~~~~ 416 (435)
T 1p22_A 400 S--SSHDDTILIWDFLNDP 416 (435)
T ss_dssp E--CCSSSEEEEEC-----
T ss_pred E--EeCCCEEEEEECCCCC
Confidence 8 8899999999997654
No 93
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.97 E-value=2.1e-30 Score=257.51 Aligned_cols=243 Identities=15% Similarity=0.198 Sum_probs=190.6
Q ss_pred CcceeEeecCC--CcEEEEE-cCCeEEEEECCCCCeEEeEec-CCCCCeEEEEEcCCCCeEEEEECCCcEEEEECCCCee
Q 014934 167 DFYLNLVDWSS--HNVLAVG-LGNCVYLWNACSSKVTKLCDL-GIDDSVCSVGWANRNTHLAVGTSHGKVQIWDASRCKR 242 (415)
Q Consensus 167 ~~~i~~l~ws~--~~~la~~-~d~~V~iwd~~~~~~~~~~~~-~~~~~V~~v~~sp~g~~la~g~~dg~V~iwd~~~~~~ 242 (415)
.-.|++|+|+| +++|+++ .|++|++||+.++........ .+...+.+++|+|++++|++|+.||.|++||+. ++.
T Consensus 164 ~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~-~~~ 242 (435)
T 4e54_B 164 GGSITGLKFNPLNTNQFYASSMEGTTRLQDFKGNILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMD-GKE 242 (435)
T ss_dssp SCCCCEEEECSSCTTEEEEECSSSCEEEEETTSCEEEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESS-SCB
T ss_pred CCCEEEEEEeCCCCCEEEEEeCCCEEEEeeccCCceeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccC-cce
Confidence 44689999997 5566666 689999999987655444332 234568899999999999999999999999986 466
Q ss_pred eEEecCCCccEEEEEeeC---CEEEEEeCCCcEEEEECCCCCcc--EEEeccccCCeEEEEEeCCCCEEEEEeCCCcEEE
Q 014934 243 VRTMEGHRLRVGALAWSS---SLLSSGSRDKSILQRDIRAQEDF--VSKLSGHKSEVCGLKWSYDNRELASGGNDNRLFV 317 (415)
Q Consensus 243 ~~~l~~h~~~V~~l~~~~---~~l~sgs~dg~I~iwd~~~~~~~--~~~~~~h~~~V~~l~~spdg~~lasg~~dg~I~i 317 (415)
+..+.+|...|.+++|++ .+|++|+.|+.|++||++..... .....+|...|.+++|+|+|++|++|+.||.|+|
T Consensus 243 ~~~~~~h~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~~i~i 322 (435)
T 4e54_B 243 LWNLRMHKKKVTHVALNPCCDWFLATASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTDQKSEIRV 322 (435)
T ss_dssp CCCSBCCSSCEEEEEECTTCSSEEEEEETTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEESSSCEEE
T ss_pred eEEEecccceEEeeeecCCCceEEEEecCcceeeEEecccccccceEEEeeeccccccceeECCCCCeeEEEcCCCEEEE
Confidence 778899999999999984 48999999999999999876532 2234579999999999999999999999999999
Q ss_pred EECCCCceeEEeccCCC------cEEEEEEcCCCCcEEEEEc---------CCCCCeEEEEECCCCcEEEEee--CCCCE
Q 014934 318 WNQHSTQPVLKYCEHTA------AVKAIAWSPHLHGLLASGG---------GTADRCIRFWNTTTNTHLSCMD--TGSQV 380 (415)
Q Consensus 318 wd~~~~~~~~~~~~h~~------~V~~l~~sp~~~~llasgg---------g~~d~~I~iwd~~t~~~~~~~~--~~~~V 380 (415)
||+.++.....+..|.. .+..+.|+|.+..+++... +..++.|++||..+++.+..+. +...|
T Consensus 323 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~~~~~l~~~~~~~v 402 (435)
T 4e54_B 323 YSASQWDCPLGLIPHPHRHFQHLTPIKAAWHPRYNLIVVGRYPDPNFKSCTPYELRTIDVFDGNSGKMMCQLYDPESSGI 402 (435)
T ss_dssp EESSSSSSEEEECCCCCCCCSSSCCCBCEECSSSSCEEEECCCCTTSCCSSTTCCCCEEEECSSSCCEEEEECCSSCCCC
T ss_pred EECCCCccceEEecccccccccceeEEEEEcCCCCEEEEEEcCCCCeEEEEecCCCEEEEEECCCCcEEEEEeCCCCCcE
Confidence 99999988877766543 2334567777664433321 1245789999999999988774 55667
Q ss_pred EEE-EECCCCCeEEEEEecCCCcEEEEECCCCcc
Q 014934 381 CNL-VWSKNVNELVSTHGYSQNQIIVWRYPTMSK 413 (415)
Q Consensus 381 ~~l-~~s~~~~~l~s~~g~~dg~I~vw~~~s~~~ 413 (415)
.++ +|+|+|++|++ |+ |+.|+||++.+++.
T Consensus 403 ~s~~~fspdg~~las--g~-d~~i~iW~~~~gk~ 433 (435)
T 4e54_B 403 SSLNEFNPMGDTLAS--AM-GYHILIWSQQEART 433 (435)
T ss_dssp CCEEEECTTSSCEEE--EC-SSEEEECCCC----
T ss_pred EEEEEECCCCCEEEE--Ec-CCcEEEEECCcCee
Confidence 776 69999999987 54 78999999988753
No 94
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.97 E-value=2.1e-30 Score=251.31 Aligned_cols=234 Identities=15% Similarity=0.258 Sum_probs=178.5
Q ss_pred CcceeEeecCC-CcEEEEE-cCCeEEEEECCCCC---eEEeEecCCCCCeEEEEEcCCCCeEEEEECCCcEEEEECCCCe
Q 014934 167 DFYLNLVDWSS-HNVLAVG-LGNCVYLWNACSSK---VTKLCDLGIDDSVCSVGWANRNTHLAVGTSHGKVQIWDASRCK 241 (415)
Q Consensus 167 ~~~i~~l~ws~-~~~la~~-~d~~V~iwd~~~~~---~~~~~~~~~~~~V~~v~~sp~g~~la~g~~dg~V~iwd~~~~~ 241 (415)
...|.+++|+| +++|+++ .|+.|++||+.+++ ....+ .+|...|.+++|+|++++|++|+.||.|++||+.+++
T Consensus 55 ~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~ 133 (377)
T 3dwl_C 55 DKIVTCVDWAPKSNRIVTCSQDRNAYVYEKRPDGTWKQTLVL-LRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQEN 133 (377)
T ss_dssp SSCEEEEEECTTTCCEEEEETTSSEEEC------CCCCEEEC-CCCSSCEEEEECCTTSSCCEEEESSSCEEECCC----
T ss_pred CceEEEEEEeCCCCEEEEEeCCCeEEEEEcCCCCceeeeeEe-cccCCceEEEEECCCCCEEEEEecCCeEEEEEECCcc
Confidence 34699999999 6666665 58999999999877 22222 2788999999999999999999999999999998876
Q ss_pred ---eeEEecC-CCccEEEEEee--CCEEEEEeCCCcEEEEECCCC-----------------CccEEEeccccCCeEEEE
Q 014934 242 ---RVRTMEG-HRLRVGALAWS--SSLLSSGSRDKSILQRDIRAQ-----------------EDFVSKLSGHKSEVCGLK 298 (415)
Q Consensus 242 ---~~~~l~~-h~~~V~~l~~~--~~~l~sgs~dg~I~iwd~~~~-----------------~~~~~~~~~h~~~V~~l~ 298 (415)
....+.+ |...|.+++|+ +.+|++|+.|+.|++||++.. ...+..+ +|...|.+++
T Consensus 134 ~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~ 212 (377)
T 3dwl_C 134 DWWVSKHLKRPLRSTILSLDWHPNNVLLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWVHAVG 212 (377)
T ss_dssp -CCCCEEECSSCCSCEEEEEECTTSSEEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSEEEEE
T ss_pred cceeeeEeecccCCCeEEEEEcCCCCEEEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcc-cCCceEEEEE
Confidence 4677877 99999999998 479999999999999998632 1234445 8999999999
Q ss_pred EeCCCCEEEEEeCCCcEEEEECCCCce----eEEeccCCCcEEEEEEcCCCCcEEEEEcCCCCCeEEEEECCCCc--E--
Q 014934 299 WSYDNRELASGGNDNRLFVWNQHSTQP----VLKYCEHTAAVKAIAWSPHLHGLLASGGGTADRCIRFWNTTTNT--H-- 370 (415)
Q Consensus 299 ~spdg~~lasg~~dg~I~iwd~~~~~~----~~~~~~h~~~V~~l~~sp~~~~llasggg~~d~~I~iwd~~t~~--~-- 370 (415)
|+|++++||+|+.|+.|++||+.+++. +..+.+|...|.+++|+|++. +|++++ .++. .+|+...+. .
T Consensus 213 ~sp~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~~~~--~~~~-~~~~~~~~~~~~~~ 288 (377)
T 3dwl_C 213 FSPSGNALAYAGHDSSVTIAYPSAPEQPPRALITVKLSQLPLRSLLWANESA-IVAAGY--NYSP-ILLQGNESGWAHTR 288 (377)
T ss_dssp ECTTSSCEEEEETTTEEC-CEECSTTSCEEECCCEECSSSCEEEEEEEETTE-EEEEES--SSSE-EEECCCC---CCSB
T ss_pred ECCCCCEEEEEeCCCcEEEEECCCCCCcceeeEeecCCCCceEEEEEcCCCC-EEEEEc--CCcE-EEEEeCCCceEEEe
Confidence 999999999999999999999999887 778889999999999999986 777775 4554 467664211 0
Q ss_pred -----------------------E---------EEe-----------------eCCCCEEEEEECCCCC----eEEEEEe
Q 014934 371 -----------------------L---------SCM-----------------DTGSQVCNLVWSKNVN----ELVSTHG 397 (415)
Q Consensus 371 -----------------------~---------~~~-----------------~~~~~V~~l~~s~~~~----~l~s~~g 397 (415)
. ..+ .|...|.++.+.+... .|++ |
T Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~H~~~i~~~~~~~~~~~~~~~~~s--~ 366 (377)
T 3dwl_C 289 DLDAGTSKTSFTHTGNTGEGREEEGPVSFTALRSTFRNMDLKGSSQSISSLPTVHQNMIATLRPYAGTPGNITAFTS--S 366 (377)
T ss_dssp CCCSCCCCCCBSSSSSBCCCCCC-------------------------CCCSSSCSSCEEEEEEEEEETTEEEEEEE--E
T ss_pred eecccccccccccccccccccccccccccccccccccchhhccccccccccCccccceeEEEeccCCCCCceEEEEe--e
Confidence 0 000 1567799998766543 4776 7
Q ss_pred cCCCcEEEEEC
Q 014934 398 YSQNQIIVWRY 408 (415)
Q Consensus 398 ~~dg~I~vw~~ 408 (415)
+.||.|+|||+
T Consensus 367 g~Dg~i~iWdl 377 (377)
T 3dwl_C 367 GTDGRVVLWTL 377 (377)
T ss_dssp ETTSEEEEECC
T ss_pred cCCCcEEEecC
Confidence 78999999985
No 95
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=99.97 E-value=4e-30 Score=244.75 Aligned_cols=202 Identities=21% Similarity=0.386 Sum_probs=170.4
Q ss_pred cCCCCCeEEEEEcCCCCeEEEEECCCcEEEEECCCCe--eeEEecCCCccEEEEEee----CCEEEEEeCCCcEEEEECC
Q 014934 205 LGIDDSVCSVGWANRNTHLAVGTSHGKVQIWDASRCK--RVRTMEGHRLRVGALAWS----SSLLSSGSRDKSILQRDIR 278 (415)
Q Consensus 205 ~~~~~~V~~v~~sp~g~~la~g~~dg~V~iwd~~~~~--~~~~l~~h~~~V~~l~~~----~~~l~sgs~dg~I~iwd~~ 278 (415)
.+|.+.|++++|+|+|++||+|+.||+|+|||+.+++ .+..+.+|...|.+++|+ +++|++|+.|++|++||++
T Consensus 10 ~~H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd~~ 89 (316)
T 3bg1_A 10 TSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWREE 89 (316)
T ss_dssp ----CCEEEEEECGGGCEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEECCS
T ss_pred ccccCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEEECC
Confidence 3899999999999999999999999999999998764 467889999999999996 4799999999999999998
Q ss_pred CCC-ccEEEeccccCCeEEEEEeCC--CCEEEEEeCCCcEEEEECCCCce---eEEeccCCCcEEEEEEcCCC-------
Q 014934 279 AQE-DFVSKLSGHKSEVCGLKWSYD--NRELASGGNDNRLFVWNQHSTQP---VLKYCEHTAAVKAIAWSPHL------- 345 (415)
Q Consensus 279 ~~~-~~~~~~~~h~~~V~~l~~spd--g~~lasg~~dg~I~iwd~~~~~~---~~~~~~h~~~V~~l~~sp~~------- 345 (415)
++. .....+.+|...|.+++|+|+ +.+||+|+.|+.|++||++.+.. ...+.+|...|.+++|+|+.
T Consensus 90 ~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~ 169 (316)
T 3bg1_A 90 NGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGSLID 169 (316)
T ss_dssp SSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSSSCBCCCEECCCCCC-----
T ss_pred CCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeeccccCCcceEEEccccCCccccc
Confidence 764 245677899999999999998 88999999999999999987632 34556899999999999973
Q ss_pred ---------CcEEEEEcCCCCCeEEEEECCCC---cEEEEee-CCCCEEEEEECCCC----CeEEEEEecCCCcEEEEEC
Q 014934 346 ---------HGLLASGGGTADRCIRFWNTTTN---THLSCMD-TGSQVCNLVWSKNV----NELVSTHGYSQNQIIVWRY 408 (415)
Q Consensus 346 ---------~~llasggg~~d~~I~iwd~~t~---~~~~~~~-~~~~V~~l~~s~~~----~~l~s~~g~~dg~I~vw~~ 408 (415)
..+|++++ .|+.|++||+.++ +++..+. |...|.+++|+|++ ..|++ |+.|+.|+||++
T Consensus 170 ~~~~~~~~~~~~l~sgs--~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~las--~s~D~~v~iw~~ 245 (316)
T 3bg1_A 170 HPSGQKPNYIKRFASGG--CDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIAS--CSQDGRVFIWTC 245 (316)
T ss_dssp -CCSCCCCCCCBEECCB--TTSBCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSSCSCCEEEE--EETTCEEEEEEC
T ss_pred cccccCccccceEEEec--CCCeEEEEEeCCCCccceeeecccCCCceEEEEecCCCCCCCceEEE--EcCCCeEEEEEc
Confidence 13778877 8999999999765 3444454 66789999999987 77887 789999999998
Q ss_pred CC
Q 014934 409 PT 410 (415)
Q Consensus 409 ~s 410 (415)
.+
T Consensus 246 ~~ 247 (316)
T 3bg1_A 246 DD 247 (316)
T ss_dssp SS
T ss_pred cC
Confidence 76
No 96
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.97 E-value=1.7e-29 Score=242.79 Aligned_cols=222 Identities=10% Similarity=0.044 Sum_probs=180.0
Q ss_pred CcEEEEE-cCCeEEEEECCCCCeEEeEecCCCCCeEEEEEcCCCCeEEEEECCCcEEEEECC---------CCeeeEEec
Q 014934 178 HNVLAVG-LGNCVYLWNACSSKVTKLCDLGIDDSVCSVGWANRNTHLAVGTSHGKVQIWDAS---------RCKRVRTME 247 (415)
Q Consensus 178 ~~~la~~-~d~~V~iwd~~~~~~~~~~~~~~~~~V~~v~~sp~g~~la~g~~dg~V~iwd~~---------~~~~~~~l~ 247 (415)
+++|++| .|+.|++||+.+++....+. ...|.++.|+|+ +++|+.|++|++|+.. +++.+..+.
T Consensus 48 ~~~l~sg~~Dg~v~iwd~~~~~~~~~~~---~~~v~~~~~~~~---~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~~~~~ 121 (343)
T 3lrv_A 48 KWVCMCRCEDGALHFTQLKDSKTITTIT---TPNPRTGGEHPA---IISRGPCNRLLLLYPGNQITILDSKTNKVLREIE 121 (343)
T ss_dssp EEEEEEEEETTEEEEEEESSSSCEEEEE---EECCCTTCCCCS---EEEECSTTEEEEEETTTEEEEEETTTCCEEEEEE
T ss_pred CCEEEEECCCCcEEEEECCCCcEEEEEe---cCCceeeeeCCc---eEEecCCCeEEEEEccCceEEeecCCcceeEEee
Confidence 3455555 78999999999998877665 356888889888 9999999999999765 444444443
Q ss_pred -CCCccEEEEEeeC----CEEEEEeCCCcEEEEECCCCCccEEEe-ccccCCeEEEEEeCCCCEEEEEeCCCcEEEEECC
Q 014934 248 -GHRLRVGALAWSS----SLLSSGSRDKSILQRDIRAQEDFVSKL-SGHKSEVCGLKWSYDNRELASGGNDNRLFVWNQH 321 (415)
Q Consensus 248 -~h~~~V~~l~~~~----~~l~sgs~dg~I~iwd~~~~~~~~~~~-~~h~~~V~~l~~spdg~~lasg~~dg~I~iwd~~ 321 (415)
+|...|.+++|++ ++|++|+.||+|++||++++.. .... ..|...|.+++|+|++.+||+|+.||.|+|||++
T Consensus 122 ~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~-~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg~i~iwd~~ 200 (343)
T 3lrv_A 122 VDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQ-YIVHSAKSDVEYSSGVLHKDSLLLALYSPDGILDVYNLS 200 (343)
T ss_dssp CCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCE-EEEECCCSSCCCCEEEECTTSCEEEEECTTSCEEEEESS
T ss_pred cCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcE-EEEEecCCCCceEEEEECCCCCEEEEEcCCCEEEEEECC
Confidence 6778999999975 6899999999999999998874 4444 3556689999999999999999999999999999
Q ss_pred CCcee-EEecc-CCCcEEEEEEcCCCCcEEEEEcCCCCCeEEEEECCCCcEEEEeeC----CCCE--EEEEECCCCCeEE
Q 014934 322 STQPV-LKYCE-HTAAVKAIAWSPHLHGLLASGGGTADRCIRFWNTTTNTHLSCMDT----GSQV--CNLVWSKNVNELV 393 (415)
Q Consensus 322 ~~~~~-~~~~~-h~~~V~~l~~sp~~~~llasggg~~d~~I~iwd~~t~~~~~~~~~----~~~V--~~l~~s~~~~~l~ 393 (415)
+++.+ ..+.. |.+.|.+++|+|++. +|++++ |+.|++||+++++.+..+.. ...+ .+++|+|++++|+
T Consensus 201 ~~~~~~~~~~~~h~~~v~~l~fs~~g~-~l~s~~---~~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~ 276 (343)
T 3lrv_A 201 SPDQASSRFPVDEEAKIKEVKFADNGY-WMVVEC---DQTVVCFDLRKDVGTLAYPTYTIPEFKTGTVTYDIDDSGKNMI 276 (343)
T ss_dssp CTTSCCEECCCCTTSCEEEEEECTTSS-EEEEEE---SSBEEEEETTSSTTCBSSCCCBC-----CCEEEEECTTSSEEE
T ss_pred CCCCCccEEeccCCCCEEEEEEeCCCC-EEEEEe---CCeEEEEEcCCCCcceeecccccccccccceEEEECCCCCEEE
Confidence 99887 78888 999999999999987 666665 44999999999877654431 1223 4699999999999
Q ss_pred EEEecC-CCcEEEEECCCCc
Q 014934 394 STHGYS-QNQIIVWRYPTMS 412 (415)
Q Consensus 394 s~~g~~-dg~I~vw~~~s~~ 412 (415)
+ ++. |+.|+||++....
T Consensus 277 ~--~s~~d~~i~v~~~~~~~ 294 (343)
T 3lrv_A 277 A--YSNESNSLTIYKFDKKT 294 (343)
T ss_dssp E--EETTTTEEEEEEECTTT
T ss_pred E--ecCCCCcEEEEEEcccc
Confidence 8 445 8999999997654
No 97
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.97 E-value=7.6e-28 Score=226.90 Aligned_cols=239 Identities=24% Similarity=0.414 Sum_probs=202.2
Q ss_pred CcceeEeecCC-CcEEEEE-cCCeEEEEECCCCCeEEeEecCCCCCeEEEEEcCCCCeEEEEECCCcEEEEECCCC-eee
Q 014934 167 DFYLNLVDWSS-HNVLAVG-LGNCVYLWNACSSKVTKLCDLGIDDSVCSVGWANRNTHLAVGTSHGKVQIWDASRC-KRV 243 (415)
Q Consensus 167 ~~~i~~l~ws~-~~~la~~-~d~~V~iwd~~~~~~~~~~~~~~~~~V~~v~~sp~g~~la~g~~dg~V~iwd~~~~-~~~ 243 (415)
...|++++|++ +++|++| .|+.|++|+..+++....+. +|...+.++.+ ++..+++|+.++.+.+|+.... ..+
T Consensus 67 ~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~~~~-~h~~~~~~~~~--~~~~l~s~~~~~~~~~~~~~~~~~~~ 143 (318)
T 4ggc_A 67 GEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMT-SHSARVGSLSW--NSYILSSGSRSGHIHHHDVRVAEHHV 143 (318)
T ss_dssp TCCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE-CCSSCEEEEEE--ETTEEEEEETTSEEEEEETTSSSCEE
T ss_pred CCeEEEEEECCCCCEEEEEECCCcEEEeecCCceeEEEec-CccceEEEeec--CCCEEEEEecCCceEeeecCCCceeE
Confidence 34699999999 7777776 58999999999999888776 78787776554 6789999999999999998765 466
Q ss_pred EEecCCCccEEEEEee--CCEEEEEeCCCcEEEEECCCCCc---cEEEeccccCCeEEEEEeCCCCEE---EEEeCCCcE
Q 014934 244 RTMEGHRLRVGALAWS--SSLLSSGSRDKSILQRDIRAQED---FVSKLSGHKSEVCGLKWSYDNREL---ASGGNDNRL 315 (415)
Q Consensus 244 ~~l~~h~~~V~~l~~~--~~~l~sgs~dg~I~iwd~~~~~~---~~~~~~~h~~~V~~l~~spdg~~l---asg~~dg~I 315 (415)
..+.+|...+..+.+. +.+|++++.||.|++||+++++. .......|...|.++.++|++..+ ++++.++.|
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i 223 (318)
T 4ggc_A 144 ATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHI 223 (318)
T ss_dssp EEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEE
T ss_pred EEEcCccCceEEEEEcCCCCEEEEEecCcceeEEECCCCcccccceeeecccCCceEEEEecCCCCcEEEEEecCCCCEE
Confidence 7788999999999998 68999999999999999987642 245566788899999999976533 467788999
Q ss_pred EEEECCCCceeEEeccCCCcEEEEEEcCCCCcEEEEEcCCCCCeEEEEECCCCcEEEEee-CCCCEEEEEECCCCCeEEE
Q 014934 316 FVWNQHSTQPVLKYCEHTAAVKAIAWSPHLHGLLASGGGTADRCIRFWNTTTNTHLSCMD-TGSQVCNLVWSKNVNELVS 394 (415)
Q Consensus 316 ~iwd~~~~~~~~~~~~h~~~V~~l~~sp~~~~llasggg~~d~~I~iwd~~t~~~~~~~~-~~~~V~~l~~s~~~~~l~s 394 (415)
++||.......... .+...+..+.|+|.+..+++++ |..|+.|++||+.+++++..+. |...|++++|+|++++|++
T Consensus 224 ~lwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~~~s-g~~d~~i~iwd~~~~~~~~~l~gH~~~V~~l~~spdg~~l~S 301 (318)
T 4ggc_A 224 RIWNVCSGACLSAV-DAHSQVCSILWSPHYKELISGH-GFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVAS 301 (318)
T ss_dssp EEEETTTCCEEEEE-ECSSCEEEEEEETTTTEEEEEE-CTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEE
T ss_pred EEEecccccccccc-cceeeeeeeeecccccceEEEE-EcCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEE
Confidence 99999988776655 6778899999999998666544 4589999999999999999987 6789999999999999999
Q ss_pred EEecCCCcEEEEECCCCc
Q 014934 395 THGYSQNQIIVWRYPTMS 412 (415)
Q Consensus 395 ~~g~~dg~I~vw~~~s~~ 412 (415)
|+.|++|+|||+.+++
T Consensus 302 --~s~D~~v~iWd~~~~d 317 (318)
T 4ggc_A 302 --AAADETLRLWRCFELD 317 (318)
T ss_dssp --EETTTEEEEECCSCCC
T ss_pred --EecCCeEEEEECCCCC
Confidence 7899999999998765
No 98
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.97 E-value=3.8e-29 Score=247.56 Aligned_cols=233 Identities=13% Similarity=0.241 Sum_probs=187.1
Q ss_pred cceeEeecCCC---cEE-EEEcCCeEEEEECCCCCeE---------------------------------------EeEe
Q 014934 168 FYLNLVDWSSH---NVL-AVGLGNCVYLWNACSSKVT---------------------------------------KLCD 204 (415)
Q Consensus 168 ~~i~~l~ws~~---~~l-a~~~d~~V~iwd~~~~~~~---------------------------------------~~~~ 204 (415)
..|++++|+|. ..| +++.|+.|++|++.+++.. ..+.
T Consensus 94 ~~V~~l~~~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (447)
T 3dw8_B 94 EKINKIRWLPQKNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFA 173 (447)
T ss_dssp CCCCEEEECCCCSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEEC
T ss_pred CceEEEEEcCCCCcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEec
Confidence 45889999993 344 4457899999998764431 1222
Q ss_pred cCCCCCeEEEEEcCCCCeEEEEECCCcEEEEECCC-CeeeEE-------ecCCCccEEEEEeeC---CEEEEEeCCCcEE
Q 014934 205 LGIDDSVCSVGWANRNTHLAVGTSHGKVQIWDASR-CKRVRT-------MEGHRLRVGALAWSS---SLLSSGSRDKSIL 273 (415)
Q Consensus 205 ~~~~~~V~~v~~sp~g~~la~g~~dg~V~iwd~~~-~~~~~~-------l~~h~~~V~~l~~~~---~~l~sgs~dg~I~ 273 (415)
.+|...|++++|+|+|++|++| .||.|++||+.+ .+.+.. +.+|...|.+++|++ .+|++|+.||.|+
T Consensus 174 ~~h~~~v~~~~~~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~ 252 (447)
T 3dw8_B 174 NAHTYHINSISINSDYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIR 252 (447)
T ss_dssp SCCSSCCCEEEECTTSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEE
T ss_pred cCCCcceEEEEEcCCCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEE
Confidence 3789999999999999999998 899999999984 444442 568999999999993 7899999999999
Q ss_pred EEECCCCCc---cEEEeccccC------------CeEEEEEeCCCCEEEEEeCCCcEEEEECCC-CceeEEeccCCCc--
Q 014934 274 QRDIRAQED---FVSKLSGHKS------------EVCGLKWSYDNRELASGGNDNRLFVWNQHS-TQPVLKYCEHTAA-- 335 (415)
Q Consensus 274 iwd~~~~~~---~~~~~~~h~~------------~V~~l~~spdg~~lasg~~dg~I~iwd~~~-~~~~~~~~~h~~~-- 335 (415)
+||++.... ....+.+|.. .|.+++|+|++++|++++. +.|+|||+++ ++++..+.+|...
T Consensus 253 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~~~~~~~~~~~~~~~~~~ 331 (447)
T 3dw8_B 253 LCDMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLNMENRPVETYQVHEYLRS 331 (447)
T ss_dssp EEETTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETTCCSSCSCCEESCGGGTT
T ss_pred EEECcCCccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCCCCccccceeeccccccc
Confidence 999998763 1567777776 8999999999999999999 9999999997 8888888888642
Q ss_pred -------------EEEEEEcCCCCcEEEEEcCCCCCeEEEEECCCCcEEEEe----------------------------
Q 014934 336 -------------VKAIAWSPHLHGLLASGGGTADRCIRFWNTTTNTHLSCM---------------------------- 374 (415)
Q Consensus 336 -------------V~~l~~sp~~~~llasggg~~d~~I~iwd~~t~~~~~~~---------------------------- 374 (415)
+..++|+|++. +|++++ .|+.|++||+.+++.+...
T Consensus 332 ~l~~~~~~~~i~~~~~~~~s~~~~-~l~s~s--~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 408 (447)
T 3dw8_B 332 KLCSLYENDCIFDKFECCWNGSDS-VVMTGS--YNNFFRMFDRNTKRDITLEASRENNKPRTVLKPRKVCASGKRKKDEI 408 (447)
T ss_dssp THHHHHHTSGGGCCCCEEECTTSS-EEEEEC--STTEEEEEETTTCCEEEEECCSTTCCTTCBCCCCCEECSSCCCTTCE
T ss_pred cccccccccccccceEEEECCCCC-EEEEec--cCCEEEEEEcCCCcceeeeecccccccccccCCccccccCCcccccc
Confidence 33499999998 557776 8999999999999876422
Q ss_pred -----eCCCCEEEEEECCCCCeEEEEEecCCCcEEEEEC
Q 014934 375 -----DTGSQVCNLVWSKNVNELVSTHGYSQNQIIVWRY 408 (415)
Q Consensus 375 -----~~~~~V~~l~~s~~~~~l~s~~g~~dg~I~vw~~ 408 (415)
+....|..++|+|+++.|++ +..+ .+++|.-
T Consensus 409 ~~~~~~~~~~i~~~~~~p~~~~la~--~~~~-~~~~~~~ 444 (447)
T 3dw8_B 409 SVDSLDFNKKILHTAWHPKENIIAV--ATTN-NLYIFQD 444 (447)
T ss_dssp EGGGCCTTSCCCEEEECSSSSEEEE--ECSS-CEEEEEC
T ss_pred cccccccCCceeEEEECCCCCEEEE--Eecc-eeeeecc
Confidence 23456889999999999998 5444 5888864
No 99
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.97 E-value=3.7e-28 Score=258.80 Aligned_cols=240 Identities=16% Similarity=0.234 Sum_probs=209.3
Q ss_pred CcceeEeecCC-CcEEEEE-cCCeEEEEECCCCCeEEeEecCCCCCeEEEEEcCCCCeEEEEECCCcEEEEECCCC-eee
Q 014934 167 DFYLNLVDWSS-HNVLAVG-LGNCVYLWNACSSKVTKLCDLGIDDSVCSVGWANRNTHLAVGTSHGKVQIWDASRC-KRV 243 (415)
Q Consensus 167 ~~~i~~l~ws~-~~~la~~-~d~~V~iwd~~~~~~~~~~~~~~~~~V~~v~~sp~g~~la~g~~dg~V~iwd~~~~-~~~ 243 (415)
...|.+++|+| +++|+++ .++.|++||..+++....+. +|.+.|++++|+|+|++|++|+.||.|++||+.++ ...
T Consensus 55 ~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~ 133 (814)
T 3mkq_A 55 ETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFE-AHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALE 133 (814)
T ss_dssp SSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEEE-CCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEE
T ss_pred CCcEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEe-cCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCceEE
Confidence 34689999999 6667766 57999999999999887776 78999999999999999999999999999999886 777
Q ss_pred EEecCCCccEEEEEeeC---CEEEEEeCCCcEEEEECCCCCccEEEeccccCCeEEEEEeC--CCCEEEEEeCCCcEEEE
Q 014934 244 RTMEGHRLRVGALAWSS---SLLSSGSRDKSILQRDIRAQEDFVSKLSGHKSEVCGLKWSY--DNRELASGGNDNRLFVW 318 (415)
Q Consensus 244 ~~l~~h~~~V~~l~~~~---~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~sp--dg~~lasg~~dg~I~iw 318 (415)
..+.+|...|.+++|++ ..|++++.||.|++||++...........|...|.+++|+| ++.+|++|+.||.|++|
T Consensus 134 ~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~ 213 (814)
T 3mkq_A 134 QTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIW 213 (814)
T ss_dssp EEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCSSCSEEEECCCTTCCCEEEECCSTTCCEEEEECTTSEEEEE
T ss_pred EEEcCCCCcEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcceeEEecCCCCCEEEEEEEECCCCCEEEEEeCCCEEEEE
Confidence 88889999999999985 58999999999999999887754444445558999999999 99999999999999999
Q ss_pred ECCCCceeEEeccCCCcEEEEEEcCCCCcEEEEEcCCCCCeEEEEECCCCcEEEEee-CCCCEEEEEECCCCCeE-EEEE
Q 014934 319 NQHSTQPVLKYCEHTAAVKAIAWSPHLHGLLASGGGTADRCIRFWNTTTNTHLSCMD-TGSQVCNLVWSKNVNEL-VSTH 396 (415)
Q Consensus 319 d~~~~~~~~~~~~h~~~V~~l~~sp~~~~llasggg~~d~~I~iwd~~t~~~~~~~~-~~~~V~~l~~s~~~~~l-~s~~ 396 (415)
|+.+++.+..+.+|...|.+++|+|++. ++++++ .|+.|++||+.+++.+..+. +...+.+++|+|++..+ +++
T Consensus 214 d~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~--~dg~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~- 289 (814)
T 3mkq_A 214 DYQTKSCVATLEGHMSNVSFAVFHPTLP-IIISGS--EDGTLKIWNSSTYKVEKTLNVGLERSWCIATHPTGRKNYIAS- 289 (814)
T ss_dssp ETTTTEEEEEEECCSSCEEEEEECSSSS-EEEEEE--TTSCEEEEETTTCSEEEEECCSSSSEEEEEECTTCGGGEEEE-
T ss_pred ECCCCcEEEEEcCCCCCEEEEEEcCCCC-EEEEEe--CCCeEEEEECCCCcEEEEeecCCCcEEEEEEccCCCceEEEE-
Confidence 9999999999999999999999999998 677776 79999999999999988886 45789999999999854 332
Q ss_pred ecCCCcEEEEECCCCc
Q 014934 397 GYSQNQIIVWRYPTMS 412 (415)
Q Consensus 397 g~~dg~I~vw~~~s~~ 412 (415)
| .++.+.+|++....
T Consensus 290 ~-~~~~~~~~~~~~~~ 304 (814)
T 3mkq_A 290 G-FDNGFTVLSLGNDE 304 (814)
T ss_dssp E-ETTEEEEEECSCCS
T ss_pred E-eCCCEEEEEcCCCC
Confidence 4 47789999986543
No 100
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.97 E-value=1.4e-28 Score=237.17 Aligned_cols=208 Identities=18% Similarity=0.343 Sum_probs=178.8
Q ss_pred eEEeEecCCCCCeEEEEEcCCCCeEEEEECCCcEEEEECC--CCeeeEEecCCCccEEEEEee----CCEEEEEeCCCcE
Q 014934 199 VTKLCDLGIDDSVCSVGWANRNTHLAVGTSHGKVQIWDAS--RCKRVRTMEGHRLRVGALAWS----SSLLSSGSRDKSI 272 (415)
Q Consensus 199 ~~~~~~~~~~~~V~~v~~sp~g~~la~g~~dg~V~iwd~~--~~~~~~~l~~h~~~V~~l~~~----~~~l~sgs~dg~I 272 (415)
+...+. +|.+.|++++|+|+|++||+|+.||.|+|||+. +.+.+..+.+|...|.+++|+ +.+|++|+.||.|
T Consensus 3 ~~~~~~-~h~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v 81 (379)
T 3jrp_A 3 MVVIAN-AHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKV 81 (379)
T ss_dssp --CCEE-ECCCCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSCE
T ss_pred ccEEec-CCcccEEEEEEcCCCCEEEEEECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCEE
Confidence 344454 789999999999999999999999999999997 667788899999999999997 5899999999999
Q ss_pred EEEECCCCC-ccEEEeccccCCeEEEEEeCC--CCEEEEEeCCCcEEEEECCCC--ceeEEeccCCCcEEEEEEcCC---
Q 014934 273 LQRDIRAQE-DFVSKLSGHKSEVCGLKWSYD--NRELASGGNDNRLFVWNQHST--QPVLKYCEHTAAVKAIAWSPH--- 344 (415)
Q Consensus 273 ~iwd~~~~~-~~~~~~~~h~~~V~~l~~spd--g~~lasg~~dg~I~iwd~~~~--~~~~~~~~h~~~V~~l~~sp~--- 344 (415)
++||++.+. .....+..|...|.+++|+|+ +.+|++++.|+.|++||+++. .....+..|...|.+++|+|.
T Consensus 82 ~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 161 (379)
T 3jrp_A 82 LIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIE 161 (379)
T ss_dssp EEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEECCTTCEEEEEECCCC--
T ss_pred EEEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEecCCCCceEEEEEcCcccc
Confidence 999999875 245677789999999999999 999999999999999999887 345566789999999999994
Q ss_pred ----------CCcEEEEEcCCCCCeEEEEECCCCcE----EEEee-CCCCEEEEEECCC---CCeEEEEEecCCCcEEEE
Q 014934 345 ----------LHGLLASGGGTADRCIRFWNTTTNTH----LSCMD-TGSQVCNLVWSKN---VNELVSTHGYSQNQIIVW 406 (415)
Q Consensus 345 ----------~~~llasggg~~d~~I~iwd~~t~~~----~~~~~-~~~~V~~l~~s~~---~~~l~s~~g~~dg~I~vw 406 (415)
+. ++++++ .|+.|++||++++.. +..+. +...|.+++|+|+ +++|++ ++.||.|++|
T Consensus 162 ~~~~~~~~~~~~-~l~~~~--~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s--~~~dg~i~iw 236 (379)
T 3jrp_A 162 EDGEHNGTKESR-KFVTGG--ADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLAS--VSQDRTCIIW 236 (379)
T ss_dssp --------CTTC-EEEEEE--TTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEE--EETTSCEEEE
T ss_pred ccccccCCCCCC-EEEEEe--CCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEE--EeCCCEEEEE
Confidence 55 777776 899999999987653 23333 6788999999999 888888 7789999999
Q ss_pred ECCCCc
Q 014934 407 RYPTMS 412 (415)
Q Consensus 407 ~~~s~~ 412 (415)
++.+.+
T Consensus 237 d~~~~~ 242 (379)
T 3jrp_A 237 TQDNEQ 242 (379)
T ss_dssp EESSTT
T ss_pred eCCCCC
Confidence 998753
No 101
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.97 E-value=3.6e-28 Score=242.32 Aligned_cols=238 Identities=18% Similarity=0.176 Sum_probs=197.2
Q ss_pred cceeEeecCC-CcEE-EEE-cCCeEEEEECC--CCCeEEeEec-CCCCCeEEEEEcCCCCeEEEEECCCcEEEEECCCCe
Q 014934 168 FYLNLVDWSS-HNVL-AVG-LGNCVYLWNAC--SSKVTKLCDL-GIDDSVCSVGWANRNTHLAVGTSHGKVQIWDASRCK 241 (415)
Q Consensus 168 ~~i~~l~ws~-~~~l-a~~-~d~~V~iwd~~--~~~~~~~~~~-~~~~~V~~v~~sp~g~~la~g~~dg~V~iwd~~~~~ 241 (415)
-.|++++|+| +..| +++ .|+.|++|++. +++....+.. .+...|++++|+|+|++|++|+.+|.|.+|++.+++
T Consensus 103 ~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~v~~~~~~~~~ 182 (450)
T 2vdu_B 103 SYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDTTVIIADKFGDVYSIDINSIP 182 (450)
T ss_dssp CCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEETTSCC
T ss_pred CceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCCEEEEEeCCCcEEEEecCCcc
Confidence 3599999999 6664 666 57999999998 7877766642 467899999999999999999999999999998876
Q ss_pred eeE----EecCCCccEEEEEeeCC-----EEEEEeCCCcEEEEECCCCCccEEEeccccCCeEEEEEeCCCCEEEEEeCC
Q 014934 242 RVR----TMEGHRLRVGALAWSSS-----LLSSGSRDKSILQRDIRAQEDFVSKLSGHKSEVCGLKWSYDNRELASGGND 312 (415)
Q Consensus 242 ~~~----~l~~h~~~V~~l~~~~~-----~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~spdg~~lasg~~d 312 (415)
... .+.+|...|.+++|+++ +|++|+.|+.|++||++++......+.+|...|.+++|+ ++++|++|+.|
T Consensus 183 ~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~h~~~v~~~~~s-d~~~l~s~~~d 261 (450)
T 2vdu_B 183 EEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWLFGHKHFVSSICCG-KDYLLLSAGGD 261 (450)
T ss_dssp CSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEECCCCSSCEEEEEEC-STTEEEEEESS
T ss_pred cccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeeeecCCCCceEEEEEC-CCCEEEEEeCC
Confidence 544 67789999999999865 899999999999999998874333366899999999999 99999999999
Q ss_pred CcEEEEECCCCceeEEecc-------------------------CCCcEEEEEEcCCCCcEEEEEcCCCCCeEEEEEC--
Q 014934 313 NRLFVWNQHSTQPVLKYCE-------------------------HTAAVKAIAWSPHLHGLLASGGGTADRCIRFWNT-- 365 (415)
Q Consensus 313 g~I~iwd~~~~~~~~~~~~-------------------------h~~~V~~l~~sp~~~~llasggg~~d~~I~iwd~-- 365 (415)
+.|+|||+.+++.+..+.. +...|.+++|+|+++.+++++. .|+.|++|++
T Consensus 262 ~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~--~d~~i~iw~~~~ 339 (450)
T 2vdu_B 262 DKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPFVAFFVE--ATKCIIILEMSE 339 (450)
T ss_dssp SEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSSSEEEEEET--TCSEEEEEEECS
T ss_pred CeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCCCEEEEEEC--CCCeEEEEEecc
Confidence 9999999999998888753 2357999999999987777664 6999999999
Q ss_pred CCC---cEEEEeeCCCCEEEEEECCCCCeEEEEEecC------CCcEEEEECCC
Q 014934 366 TTN---THLSCMDTGSQVCNLVWSKNVNELVSTHGYS------QNQIIVWRYPT 410 (415)
Q Consensus 366 ~t~---~~~~~~~~~~~V~~l~~s~~~~~l~s~~g~~------dg~I~vw~~~s 410 (415)
.++ +.+..+.....|.+++|+|++ .++++ +.. ++.|.+|.+..
T Consensus 340 ~~~~~l~~~~~~~~~~~v~~~~~~~~~-~~v~~-~~~~~~~~~~~~i~v~~~~~ 391 (450)
T 2vdu_B 340 KQKGDLALKQIITFPYNVISLSAHNDE-FQVTL-DNKESSGVQKNFAKFIEYNL 391 (450)
T ss_dssp SSTTCEEEEEEEECSSCEEEEEEETTE-EEEEE-CCTTCCSSCCCSEEEEEEET
T ss_pred CCCCceeeccEeccCCceEEEEecCCc-EEEEE-ecccCCCCCCcceEEEEEEc
Confidence 666 666777767899999999954 44443 332 55688988753
No 102
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.97 E-value=3.3e-28 Score=235.48 Aligned_cols=229 Identities=14% Similarity=0.113 Sum_probs=188.8
Q ss_pred cceeEeecCC-CcEEEEEcCCeEEEEECCCCCeEEeEecCCCCCeEEEEEcCCCCeE-EEEECCCcEEEEECCCCeeeEE
Q 014934 168 FYLNLVDWSS-HNVLAVGLGNCVYLWNACSSKVTKLCDLGIDDSVCSVGWANRNTHL-AVGTSHGKVQIWDASRCKRVRT 245 (415)
Q Consensus 168 ~~i~~l~ws~-~~~la~~~d~~V~iwd~~~~~~~~~~~~~~~~~V~~v~~sp~g~~l-a~g~~dg~V~iwd~~~~~~~~~ 245 (415)
-.|++++|+| +.+||+|.++.+++|+..+++....... ..+..+++.++++.+ ++|+.|+.|+|||+.+++.+..
T Consensus 20 ~~V~~v~fs~dg~~la~g~~~~~~iw~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~d~~v~iWd~~~~~~~~~ 96 (355)
T 3vu4_A 20 NPVTDYEFNQDQSCLILSTLKSFEIYNVHPVAHIMSQEM---RHLSKVRMLHRTNYVAFVTGVKEVVHIWDDVKKQDVSR 96 (355)
T ss_dssp CCCCEEEECTTSSEEEEECSSEEEEEEETTEEEEEEEEC---SCCCEEEECTTSSEEEEECSSTTEEEEEETTTTEEEEE
T ss_pred CceEEEEECCCCCEEEEEcCCEEEEEecCCcceeeeeec---CCeEEEEEcCCCCEEEEEECCccEEEEEECCCCcEEEE
Confidence 3588999999 8899999888899999887765544432 257888999988877 4577789999999999999988
Q ss_pred ecCCCccEEEEEeeCCEEEEEeCCCcEEEEECCCCCccEEEeccccCCeEEEEEeCCCCEEEE--EeCCCcEEEEECCCC
Q 014934 246 MEGHRLRVGALAWSSSLLSSGSRDKSILQRDIRAQEDFVSKLSGHKSEVCGLKWSYDNRELAS--GGNDNRLFVWNQHST 323 (415)
Q Consensus 246 l~~h~~~V~~l~~~~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~spdg~~las--g~~dg~I~iwd~~~~ 323 (415)
+. |...|.+++++++.++++. |+.|++||+......+..+.. ....+++++ .++|+ |+.||.|++||+.++
T Consensus 97 ~~-~~~~v~~v~~~~~~~~~~~-~~~i~i~d~~~~~~~~~~~~~---~~~~~~~s~--~~la~~sg~~~g~v~iwd~~~~ 169 (355)
T 3vu4_A 97 IK-VDAPVKDLFLSREFIVVSY-GDVISVFKFGNPWKRITDDIR---FGGVCEFSN--GLLVYSNEFNLGQIHITKLQSS 169 (355)
T ss_dssp EE-CSSCEEEEEECSSEEEEEE-TTEEEEEESSTTCCBSSCCEE---EEEEEEEET--TEEEEEESSCTTCEEEEECCC-
T ss_pred EE-CCCceEEEEEcCCEEEEEE-cCEEEEEECCCCceeeEEecc---CCceEEEEc--cEEEEeCCCcCcEEEEEECCCC
Confidence 87 6779999999988877765 788999999987223333333 344456666 66766 589999999999986
Q ss_pred c---------------e-eEEeccCCCcEEEEEEcCCCCcEEEEEcCCCCCe-EEEEECCCCcEEEEee---CCCCEEEE
Q 014934 324 Q---------------P-VLKYCEHTAAVKAIAWSPHLHGLLASGGGTADRC-IRFWNTTTNTHLSCMD---TGSQVCNL 383 (415)
Q Consensus 324 ~---------------~-~~~~~~h~~~V~~l~~sp~~~~llasggg~~d~~-I~iwd~~t~~~~~~~~---~~~~V~~l 383 (415)
+ + +..+.+|...|.+++|+|++. +|++++ .|++ |++||+.+++++..+. +...|.++
T Consensus 170 ~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~-~l~s~s--~d~~~v~iwd~~~~~~~~~~~~g~h~~~v~~~ 246 (355)
T 3vu4_A 170 GSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSD-MVATCS--QDGTIIRVFKTEDGVLVREFRRGLDRADVVDM 246 (355)
T ss_dssp -----------------CCEEECCCSSCEEEEEECTTSS-EEEEEE--TTCSEEEEEETTTCCEEEEEECTTCCSCEEEE
T ss_pred CccccccccccccccCcccEEEEccCCceEEEEECCCCC-EEEEEe--CCCCEEEEEECCCCcEEEEEEcCCCCCcEEEE
Confidence 5 2 778899999999999999987 778877 8998 9999999999999997 77899999
Q ss_pred EECCCCCeEEEEEecCCCcEEEEECCCC
Q 014934 384 VWSKNVNELVSTHGYSQNQIIVWRYPTM 411 (415)
Q Consensus 384 ~~s~~~~~l~s~~g~~dg~I~vw~~~s~ 411 (415)
+|+|++++|++ ++.|+.|+|||+...
T Consensus 247 ~~s~~~~~l~s--~s~d~~v~iw~~~~~ 272 (355)
T 3vu4_A 247 KWSTDGSKLAV--VSDKWTLHVFEIFND 272 (355)
T ss_dssp EECTTSCEEEE--EETTCEEEEEESSCC
T ss_pred EECCCCCEEEE--EECCCEEEEEEccCC
Confidence 99999999999 778999999999764
No 103
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.97 E-value=3.6e-29 Score=245.61 Aligned_cols=234 Identities=14% Similarity=0.147 Sum_probs=170.8
Q ss_pred ecCC-CcEEEEE-cCCeEEEEECCCCCeEEeEe----cCCCCCeEEEEEcC--------CCCeEEEEECCCcEEEEECCC
Q 014934 174 DWSS-HNVLAVG-LGNCVYLWNACSSKVTKLCD----LGIDDSVCSVGWAN--------RNTHLAVGTSHGKVQIWDASR 239 (415)
Q Consensus 174 ~ws~-~~~la~~-~d~~V~iwd~~~~~~~~~~~----~~~~~~V~~v~~sp--------~g~~la~g~~dg~V~iwd~~~ 239 (415)
.+++ ..+||++ .|++|+|||..+++...... .+|.+.|.+|+|+| +|++||+|+.|++|+|||+.+
T Consensus 96 ~~~~~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~ 175 (393)
T 4gq1_A 96 SSPVYSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTD 175 (393)
T ss_dssp -CCEEEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEET
T ss_pred ecCCCCCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCC
Confidence 3344 5667766 58999999999887644322 27999999999998 889999999999999999998
Q ss_pred CeeeEEecCCCccEEEEEeeC---CEEEEEeCCCcEEEEECCCCCccE------------------------EEeccccC
Q 014934 240 CKRVRTMEGHRLRVGALAWSS---SLLSSGSRDKSILQRDIRAQEDFV------------------------SKLSGHKS 292 (415)
Q Consensus 240 ~~~~~~l~~h~~~V~~l~~~~---~~l~sgs~dg~I~iwd~~~~~~~~------------------------~~~~~h~~ 292 (415)
+..+..+.+|...|.+++|+| .+|++|+.||+|++||++++.... ....+|..
T Consensus 176 ~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~ 255 (393)
T 4gq1_A 176 EGPILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIAS 255 (393)
T ss_dssp TEEEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC------CCSS
T ss_pred CceeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEecccccceeeeecccccc
Confidence 888888888999999999995 479999999999999998765211 11246778
Q ss_pred CeEEEEEe-CCCCEEEEEeCCCcEEEEECCCCceeEEeccCCCcEEEEEEc------------------CC-CCcEEEEE
Q 014934 293 EVCGLKWS-YDNRELASGGNDNRLFVWNQHSTQPVLKYCEHTAAVKAIAWS------------------PH-LHGLLASG 352 (415)
Q Consensus 293 ~V~~l~~s-pdg~~lasg~~dg~I~iwd~~~~~~~~~~~~h~~~V~~l~~s------------------p~-~~~llasg 352 (415)
.|.++.|+ |+++.|++++.|+.+++||+..++....+..|...+..+.+. |. +..++++|
T Consensus 256 ~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg 335 (393)
T 4gq1_A 256 SLANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGISLFPSLLGACPHPRYMDYFATAH 335 (393)
T ss_dssp SCSEEEEETTTTCEEEEECTTSEEEEEEC-------------------CCSCSEEEECSSCCSSCCEECSSCTTEEEEEE
T ss_pred cceeeeeecCCCCEEEEEeCCCCEEEEECccCCCCceEeeecCccccEEEccccccccccCcceeEEEccCCCCEEEEEE
Confidence 89999987 799999999999999999998887766666665555444333 32 33355666
Q ss_pred cCCCCCeEEEEECCCCcEEEEe-eCCCCEEEEEECCCCCeEEEEEecCCCcEEEEECCCCc
Q 014934 353 GGTADRCIRFWNTTTNTHLSCM-DTGSQVCNLVWSKNVNELVSTHGYSQNQIIVWRYPTMS 412 (415)
Q Consensus 353 gg~~d~~I~iwd~~t~~~~~~~-~~~~~V~~l~~s~~~~~l~s~~g~~dg~I~vw~~~s~~ 412 (415)
+ .|+.|++||+.+++++... .+...|.+++|+|+|++|++ ++ ++.+.+|++....
T Consensus 336 s--~Dg~V~lwd~~~~~~~~~~~~~~~~V~svafspdG~~LA~--as-~~Gv~lvrL~gf~ 391 (393)
T 4gq1_A 336 S--QHGLIQLINTYEKDSNSIPIQLGMPIVDFCWHQDGSHLAI--AT-EGSVLLTRLMGFT 391 (393)
T ss_dssp T--TTTEEEEEETTCTTCCEEEEECSSCEEEEEECTTSSEEEE--EE-SSEEEEEEEGGGC
T ss_pred C--CCCEEEEEECCCCcEEEEecCCCCcEEEEEEcCCCCEEEE--Ee-CCCeEEEEEeCcc
Confidence 5 8999999999998876554 47789999999999999998 54 4567777765433
No 104
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.97 E-value=3.5e-29 Score=247.89 Aligned_cols=234 Identities=14% Similarity=0.173 Sum_probs=192.3
Q ss_pred CcceeEeecCC-CcEEEEE-cCCeEEEEECC---CCCeEEeEe--------c-C--CCCCeEEEE--EcCCCCeEEEEEC
Q 014934 167 DFYLNLVDWSS-HNVLAVG-LGNCVYLWNAC---SSKVTKLCD--------L-G--IDDSVCSVG--WANRNTHLAVGTS 228 (415)
Q Consensus 167 ~~~i~~l~ws~-~~~la~~-~d~~V~iwd~~---~~~~~~~~~--------~-~--~~~~V~~v~--~sp~g~~la~g~~ 228 (415)
...|.+++|++ +++|+++ .|+.|++||+. +++...... + . +...+.++. +++++.+|++|+.
T Consensus 111 ~~~v~~~~~~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 190 (437)
T 3gre_A 111 SSTVTQITMIPNFDAFAVSSKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTN 190 (437)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEET
T ss_pred CCCEEEEEEeCCCCEEEEEeCCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeC
Confidence 34699999999 6666665 68999999984 555443322 1 1 566778877 5688999999999
Q ss_pred CCcEEEEECCCCeeeEEecC--CCccEEEEEee--CCEEEEEeCCCcEEEEECCCCCccEEEec-cccCCeEEEEEeC--
Q 014934 229 HGKVQIWDASRCKRVRTMEG--HRLRVGALAWS--SSLLSSGSRDKSILQRDIRAQEDFVSKLS-GHKSEVCGLKWSY-- 301 (415)
Q Consensus 229 dg~V~iwd~~~~~~~~~l~~--h~~~V~~l~~~--~~~l~sgs~dg~I~iwd~~~~~~~~~~~~-~h~~~V~~l~~sp-- 301 (415)
||.|++||+.+++.+..+.+ |...|.+++|+ +.+|++|+.||.|++||++.+. .+..+. .|...|.+++|+|
T Consensus 191 d~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~-~~~~~~~~~~~~v~~~~~~~~~ 269 (437)
T 3gre_A 191 LSRVIIFDIRTLERLQIIENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNV-LIRSWSFGDHAPITHVEVCQFY 269 (437)
T ss_dssp TSEEEEEETTTCCEEEEEECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTE-EEEEEBCTTCEEEEEEEECTTT
T ss_pred CCeEEEEeCCCCeeeEEEccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCcc-EEEEEecCCCCceEEEEecccc
Confidence 99999999999999999988 89999999998 5799999999999999999876 556654 7888999996664
Q ss_pred --CCCEEEEEeCCCcEEEEECCCCceeEEecc--------------------------CCCcEEEEEEcCCCCcEEEEEc
Q 014934 302 --DNRELASGGNDNRLFVWNQHSTQPVLKYCE--------------------------HTAAVKAIAWSPHLHGLLASGG 353 (415)
Q Consensus 302 --dg~~lasg~~dg~I~iwd~~~~~~~~~~~~--------------------------h~~~V~~l~~sp~~~~llasgg 353 (415)
++.+|++|+.||.|+|||+++++.+..+.+ |...|.+++|+ ++ .+|++++
T Consensus 270 s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~~-~~l~s~~ 347 (437)
T 3gre_A 270 GKNSVIVVGGSSKTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS-ND-KILLTDE 347 (437)
T ss_dssp CTTEEEEEEESTTEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-TT-EEEEEEG
T ss_pred CCCccEEEEEcCCCcEEEEEcCCCcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEEC-Cc-eEEEecC
Confidence 688999999999999999999988877764 45567888888 44 4778887
Q ss_pred CCCCCeEEEEECCCCcEEEEee--------------------------------------CCCCEEEEEECCC--CCeEE
Q 014934 354 GTADRCIRFWNTTTNTHLSCMD--------------------------------------TGSQVCNLVWSKN--VNELV 393 (415)
Q Consensus 354 g~~d~~I~iwd~~t~~~~~~~~--------------------------------------~~~~V~~l~~s~~--~~~l~ 393 (415)
.|+.|++||+.+++.+..+. |...|.+++|+++ +..|+
T Consensus 348 --~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~I~~i~~~~~~~~~~l~ 425 (437)
T 3gre_A 348 --ATSSIVMFSLNELSSSKAVISPSRFSDVFIPTQVTANLTMLLRKMKRTSTHSVDDSLYHHDIINSISTCEVDETPLLV 425 (437)
T ss_dssp --GGTEEEEEETTCGGGCEEEECC--CCCEEEEEEEETTEEEEEEECC-------------CCCEEEEEEEESSSSEEEE
T ss_pred --CCCeEEEEECCCcccceEEecccccCceEEEEEeecceEEEEEecccccccccCcccccccceeeEeeeccCCceEEE
Confidence 89999999999988766554 5678999999998 66777
Q ss_pred EEEecCCCcEEEEE
Q 014934 394 STHGYSQNQIIVWR 407 (415)
Q Consensus 394 s~~g~~dg~I~vw~ 407 (415)
+ |+.||.|+||+
T Consensus 426 s--~~~dG~I~iw~ 437 (437)
T 3gre_A 426 A--CDNSGLIGIFQ 437 (437)
T ss_dssp E--EETTSCEEEEC
T ss_pred E--EcCCceEEEeC
Confidence 7 78999999995
No 105
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.97 E-value=2.5e-28 Score=232.81 Aligned_cols=225 Identities=16% Similarity=0.201 Sum_probs=194.2
Q ss_pred CcceeEeecCC-Cc-EEEEE-cCCeEEEEEC-CCCCeEEeEecC--CCCCeEEEEEcCCCCeEEEEECCCcEEEEECCC-
Q 014934 167 DFYLNLVDWSS-HN-VLAVG-LGNCVYLWNA-CSSKVTKLCDLG--IDDSVCSVGWANRNTHLAVGTSHGKVQIWDASR- 239 (415)
Q Consensus 167 ~~~i~~l~ws~-~~-~la~~-~d~~V~iwd~-~~~~~~~~~~~~--~~~~V~~v~~sp~g~~la~g~~dg~V~iwd~~~- 239 (415)
...+.+++|++ ++ +|+++ .++.|++|++ .+++...+. + |...|.+++|+| +.+|++|+.||.|++||+.+
T Consensus 56 ~~~v~~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~--~~~~~~~v~~l~~~~-~~~l~s~~~d~~i~iwd~~~~ 132 (342)
T 1yfq_A 56 KHPLLCCNFIDNTDLQIYVGTVQGEILKVDLIGSPSFQALT--NNEANLGICRICKYG-DDKLIAASWDGLIEVIDPRNY 132 (342)
T ss_dssp SSCEEEEEEEESSSEEEEEEETTSCEEEECSSSSSSEEECB--SCCCCSCEEEEEEET-TTEEEEEETTSEEEEECHHHH
T ss_pred CCceEEEEECCCCCcEEEEEcCCCeEEEEEeccCCceEecc--ccCCCCceEEEEeCC-CCEEEEEcCCCeEEEEccccc
Confidence 34689999998 66 56665 6899999999 888764333 6 899999999999 99999999999999999987
Q ss_pred --------CeeeEEecCCCccEEEEEeeCCEEEEEeCCCcEEEEECCC-CCc-cEEEeccccCCeEEEEEeC-CCCEEEE
Q 014934 240 --------CKRVRTMEGHRLRVGALAWSSSLLSSGSRDKSILQRDIRA-QED-FVSKLSGHKSEVCGLKWSY-DNRELAS 308 (415)
Q Consensus 240 --------~~~~~~l~~h~~~V~~l~~~~~~l~sgs~dg~I~iwd~~~-~~~-~~~~~~~h~~~V~~l~~sp-dg~~las 308 (415)
++.+..+. |...|.+++|+++.+++++.|+.|++||++. ... .......|...|.+++|+| ++++|++
T Consensus 133 ~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~ 211 (342)
T 1yfq_A 133 GDGVIAVKNLNSNNTK-VKNKIFTMDTNSSRLIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYAC 211 (342)
T ss_dssp TTBCEEEEESCSSSSS-SCCCEEEEEECSSEEEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEE
T ss_pred ccccccccCCeeeEEe-eCCceEEEEecCCcEEEEeCCCeEEEEECCccccccceeeecCCCCceeEEEECCCCCCEEEE
Confidence 66666666 8899999999988899999999999999998 543 3345567889999999999 9999999
Q ss_pred EeCCCcEEEEECCCC------ceeEEeccCCC---------cEEEEEEcCCCCcEEEEEcCCCCCeEEEEECCCCcEEEE
Q 014934 309 GGNDNRLFVWNQHST------QPVLKYCEHTA---------AVKAIAWSPHLHGLLASGGGTADRCIRFWNTTTNTHLSC 373 (415)
Q Consensus 309 g~~dg~I~iwd~~~~------~~~~~~~~h~~---------~V~~l~~sp~~~~llasggg~~d~~I~iwd~~t~~~~~~ 373 (415)
|+.||.|++||+... +.+..+..|.. .|.+++|+|++. +|++++ .|+.|++||+.+++.+..
T Consensus 212 ~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~-~l~~~~--~dg~i~vwd~~~~~~~~~ 288 (342)
T 1yfq_A 212 SSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHK-FLYTAG--SDGIISCWNLQTRKKIKN 288 (342)
T ss_dssp EETTSEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTC-CEEEEE--TTSCEEEEETTTTEEEEE
T ss_pred EecCCcEEEEEEcCCCcccccccceeeecccccccccccceeEEEEEEcCCCC-EEEEec--CCceEEEEcCccHhHhhh
Confidence 999999999999887 78888888865 999999999988 556665 799999999999999888
Q ss_pred ee-C-CCCEEEEEECCCCCeEEEEEecCCCc
Q 014934 374 MD-T-GSQVCNLVWSKNVNELVSTHGYSQNQ 402 (415)
Q Consensus 374 ~~-~-~~~V~~l~~s~~~~~l~s~~g~~dg~ 402 (415)
+. + ...|.+++ +++++|++ ++.||.
T Consensus 289 ~~~~h~~~v~~~~--~~~~~l~s--~s~Dg~ 315 (342)
T 1yfq_A 289 FAKFNEDSVVKIA--CSDNILCL--ATSDDT 315 (342)
T ss_dssp CCCCSSSEEEEEE--ECSSEEEE--EEECTH
T ss_pred hhcccCCCceEec--CCCCeEEE--EecCCc
Confidence 86 4 67899999 99999999 667888
No 106
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.96 E-value=8.7e-28 Score=247.06 Aligned_cols=234 Identities=18% Similarity=0.243 Sum_probs=203.7
Q ss_pred cc-eeEeecCC---CcEEEEE-cCCeEEEEECCCC--------CeEEeEecCCCCCeEEEEEcCCCCeEEEEECC----C
Q 014934 168 FY-LNLVDWSS---HNVLAVG-LGNCVYLWNACSS--------KVTKLCDLGIDDSVCSVGWANRNTHLAVGTSH----G 230 (415)
Q Consensus 168 ~~-i~~l~ws~---~~~la~~-~d~~V~iwd~~~~--------~~~~~~~~~~~~~V~~v~~sp~g~~la~g~~d----g 230 (415)
.. |++++|+| +++|+++ .|+.|++|++.++ +....+. .|...|.+++|+|+|++|++++.+ +
T Consensus 64 ~~~v~~~~~sp~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~~~~~~~~~~~ 142 (615)
T 1pgu_A 64 SSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQ-VLAGPISDISWDFEGRRLCVVGEGRDNFG 142 (615)
T ss_dssp TSCEEEEEECSSTTCCEEEEEETTSEEEEEEEEEEGGGTEEEEEEEEEEE-CCSSCEEEEEECTTSSEEEEEECCSSCSE
T ss_pred CceEEEEEECcCCCCCEEEEecCCCEEEEEeCCCCcccccccccccchhh-cccccEEEEEEeCCCCEEEEeccCCCCcc
Confidence 35 89999998 4566666 5899999999755 3444443 688999999999999999999987 6
Q ss_pred cEEEEECCCCeeeEEecCCCccEEEEEeeCC---EEEEEeCCCcEEEEECCCCCccEEEeccccC---CeEEEEEeCC-C
Q 014934 231 KVQIWDASRCKRVRTMEGHRLRVGALAWSSS---LLSSGSRDKSILQRDIRAQEDFVSKLSGHKS---EVCGLKWSYD-N 303 (415)
Q Consensus 231 ~V~iwd~~~~~~~~~l~~h~~~V~~l~~~~~---~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~---~V~~l~~spd-g 303 (415)
.|.+|| .++.+..+.+|...|.+++|+++ .|++++.|+.|++||+.... ....+.+|.. .|.+++|+|+ +
T Consensus 143 ~v~~~d--~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~ 219 (615)
T 1pgu_A 143 VFISWD--SGNSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFK-FSASDRTHHKQGSFVRDVEFSPDSG 219 (615)
T ss_dssp EEEETT--TCCEEEECCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBE-EEEEECSSSCTTCCEEEEEECSTTC
T ss_pred EEEEEE--CCCcceeeecCCccEEEEEECCCCCcEEEEEeCCCcEEEEeCCCcc-eeeeecccCCCCceEEEEEECCCCC
Confidence 888888 56788899999999999999953 89999999999999998876 5778889999 9999999999 9
Q ss_pred CEEEEEeCCCcEEEEECCCCceeEEe-c---cCCCcEEEEEEcCCCCcEEEEEcCCCCCeEEEEECCCCcEEEEeeCC--
Q 014934 304 RELASGGNDNRLFVWNQHSTQPVLKY-C---EHTAAVKAIAWSPHLHGLLASGGGTADRCIRFWNTTTNTHLSCMDTG-- 377 (415)
Q Consensus 304 ~~lasg~~dg~I~iwd~~~~~~~~~~-~---~h~~~V~~l~~sp~~~~llasggg~~d~~I~iwd~~t~~~~~~~~~~-- 377 (415)
++|++++.|+.|++||+.+++.+..+ . .|...|.+++|+ ++. ++++++ .|+.|++||+.+++.+..+...
T Consensus 220 ~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~-~l~~~~--~d~~i~~wd~~~~~~~~~~~~~~~ 295 (615)
T 1pgu_A 220 EFVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQGGIFALSWL-DSQ-KFATVG--ADATIRVWDVTTSKCVQKWTLDKQ 295 (615)
T ss_dssp CEEEEEETTCCEEEEETTTCCEEEECCBTTBCCCSCEEEEEES-SSS-EEEEEE--TTSEEEEEETTTTEEEEEEECCTT
T ss_pred CEEEEEeCCCeEEEEECCCCCEeEEecccccccCCceEEEEEc-CCC-EEEEEc--CCCcEEEEECCCCcEEEEEcCCCC
Confidence 99999999999999999999999998 6 899999999999 766 666666 7999999999999999888754
Q ss_pred ---CCEEEEEECCCCCeEEEEEecCCCcEEEEECCCCc
Q 014934 378 ---SQVCNLVWSKNVNELVSTHGYSQNQIIVWRYPTMS 412 (415)
Q Consensus 378 ---~~V~~l~~s~~~~~l~s~~g~~dg~I~vw~~~s~~ 412 (415)
..+.++.|. ++..+++ |+.|+.|++|++.+.+
T Consensus 296 ~~~~~~~~~~~~-~~~~l~~--~~~~g~i~~~d~~~~~ 330 (615)
T 1pgu_A 296 QLGNQQVGVVAT-GNGRIIS--LSLDGTLNFYELGHDE 330 (615)
T ss_dssp CGGGCEEEEEEE-ETTEEEE--EETTSCEEEEETTEEE
T ss_pred cccCceeEEEeC-CCCeEEE--EECCCCEEEEECCCCc
Confidence 678889996 8888888 7789999999998654
No 107
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.96 E-value=4.8e-28 Score=240.20 Aligned_cols=212 Identities=22% Similarity=0.444 Sum_probs=181.6
Q ss_pred CCCeEEeEecCCCCCeEEEEEcCC-CCeEEEEECCCcEEEEECCC----------CeeeEEecCCCccEEEEEeeC--C-
Q 014934 196 SSKVTKLCDLGIDDSVCSVGWANR-NTHLAVGTSHGKVQIWDASR----------CKRVRTMEGHRLRVGALAWSS--S- 261 (415)
Q Consensus 196 ~~~~~~~~~~~~~~~V~~v~~sp~-g~~la~g~~dg~V~iwd~~~----------~~~~~~l~~h~~~V~~l~~~~--~- 261 (415)
++++.......|.+.|++++|+|+ +.+||+|+.+|.|++||+.+ .+.+..+.+|...|.+++|++ .
T Consensus 116 ~~~~~~~~~~~h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~ 195 (430)
T 2xyi_A 116 CGKIEIEIKINHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNG 195 (430)
T ss_dssp --CEEEEEEEEESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTT
T ss_pred CCceEEEEEEcCCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCC
Confidence 344444444578899999999997 78999999999999999976 577788899999999999984 3
Q ss_pred EEEEEeCCCcEEEEECCCCCc------cEEEeccccCCeEEEEEeC-CCCEEEEEeCCCcEEEEECCCC---ceeEEecc
Q 014934 262 LLSSGSRDKSILQRDIRAQED------FVSKLSGHKSEVCGLKWSY-DNRELASGGNDNRLFVWNQHST---QPVLKYCE 331 (415)
Q Consensus 262 ~l~sgs~dg~I~iwd~~~~~~------~~~~~~~h~~~V~~l~~sp-dg~~lasg~~dg~I~iwd~~~~---~~~~~~~~ 331 (415)
+|++|+.||.|++||+..... ....+.+|...|.+++|+| ++.+|++++.|+.|++||++++ +++..+..
T Consensus 196 ~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~ 275 (430)
T 2xyi_A 196 YLLSASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDA 275 (430)
T ss_dssp EEEEECTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEEC
T ss_pred eEEEEeCCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeec
Confidence 999999999999999987431 1356678999999999999 7889999999999999999987 67888889
Q ss_pred CCCcEEEEEEcCCCCcEEEEEcCCCCCeEEEEECCC-CcEEEEee-CCCCEEEEEECCCCCe-EEEEEecCCCcEEEEEC
Q 014934 332 HTAAVKAIAWSPHLHGLLASGGGTADRCIRFWNTTT-NTHLSCMD-TGSQVCNLVWSKNVNE-LVSTHGYSQNQIIVWRY 408 (415)
Q Consensus 332 h~~~V~~l~~sp~~~~llasggg~~d~~I~iwd~~t-~~~~~~~~-~~~~V~~l~~s~~~~~-l~s~~g~~dg~I~vw~~ 408 (415)
|...|.+++|+|++.+++++|+ .|+.|++||+++ +..+..+. +...|.+++|+|++.. |++ ++.|+.|+|||+
T Consensus 276 ~~~~v~~i~~~p~~~~~l~tg~--~dg~v~vwd~~~~~~~~~~~~~h~~~v~~i~~sp~~~~~l~s--~~~d~~i~iwd~ 351 (430)
T 2xyi_A 276 HTAEVNCLSFNPYSEFILATGS--ADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILAS--SGTDRRLHVWDL 351 (430)
T ss_dssp CSSCEEEEEECSSCTTEEEEEE--TTSEEEEEETTCTTSCSEEEECCSSCEEEEEECSSCTTEEEE--EETTSCCEEEEG
T ss_pred CCCCeEEEEeCCCCCCEEEEEe--CCCeEEEEeCCCCCCCeEEeecCCCCEEEEEECCCCCCEEEE--EeCCCcEEEEeC
Confidence 9999999999999998999987 899999999998 55666665 7789999999999975 555 678999999999
Q ss_pred CCC
Q 014934 409 PTM 411 (415)
Q Consensus 409 ~s~ 411 (415)
...
T Consensus 352 ~~~ 354 (430)
T 2xyi_A 352 SKI 354 (430)
T ss_dssp GGT
T ss_pred CCC
Confidence 763
No 108
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.96 E-value=6.5e-28 Score=234.40 Aligned_cols=196 Identities=14% Similarity=0.132 Sum_probs=164.6
Q ss_pred CcceeEeecCC-CcEEEEE---cCCeEEEEECCCCCeEEeEecCCCCCeEEEEEcCCCCeEEEEECCCcEEEEECCCCee
Q 014934 167 DFYLNLVDWSS-HNVLAVG---LGNCVYLWNACSSKVTKLCDLGIDDSVCSVGWANRNTHLAVGTSHGKVQIWDASRCKR 242 (415)
Q Consensus 167 ~~~i~~l~ws~-~~~la~~---~d~~V~iwd~~~~~~~~~~~~~~~~~V~~v~~sp~g~~la~g~~dg~V~iwd~~~~~~ 242 (415)
+.|+.+++||| +++|+++ .|+.|+|||+.+++....+ .|...|.+|+|+|+|++|++++.+ .+.+|+..+++.
T Consensus 133 ~~~~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~~~~~~~--~~~~~V~~v~fspdg~~l~s~s~~-~~~~~~~~~~~~ 209 (365)
T 4h5i_A 133 DDYTKLVYISREGTVAAIASSKVPAIMRIIDPSDLTEKFEI--ETRGEVKDLHFSTDGKVVAYITGS-SLEVISTVTGSC 209 (365)
T ss_dssp TCCEEEEEECTTSSCEEEEESCSSCEEEEEETTTTEEEEEE--ECSSCCCEEEECTTSSEEEEECSS-CEEEEETTTCCE
T ss_pred ccCEEEEEEcCCCCEEEEEECCCCCEEEEeECCCCcEEEEe--CCCCceEEEEEccCCceEEeccce-eEEEEEeccCcc
Confidence 45789999999 7776654 3689999999999877666 467889999999999999998855 577777777665
Q ss_pred eE--EecCCCccEEEEEee--CCEEEEEeCCC----cEEEEECCCCCcc---EEEeccccCCeEEEEEeCCCCEEEEEeC
Q 014934 243 VR--TMEGHRLRVGALAWS--SSLLSSGSRDK----SILQRDIRAQEDF---VSKLSGHKSEVCGLKWSYDNRELASGGN 311 (415)
Q Consensus 243 ~~--~l~~h~~~V~~l~~~--~~~l~sgs~dg----~I~iwd~~~~~~~---~~~~~~h~~~V~~l~~spdg~~lasg~~ 311 (415)
+. ....|...|.+++|+ +..+++++.|+ .+++||+...... ...+.+|...|++++|+|||++||+|+.
T Consensus 210 ~~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~ 289 (365)
T 4h5i_A 210 IARKTDFDKNWSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASN 289 (365)
T ss_dssp EEEECCCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEET
T ss_pred eeeeecCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcC
Confidence 53 345789999999998 56888988887 5888998766422 3456789999999999999999999999
Q ss_pred CCcEEEEECCCCceeEEe-ccCCCcEEEEEEcCCCCcEEEEEcCCCCCeEEEEECCCC
Q 014934 312 DNRLFVWNQHSTQPVLKY-CEHTAAVKAIAWSPHLHGLLASGGGTADRCIRFWNTTTN 368 (415)
Q Consensus 312 dg~I~iwd~~~~~~~~~~-~~h~~~V~~l~~sp~~~~llasggg~~d~~I~iwd~~t~ 368 (415)
|+.|+|||+++++++..+ .+|...|++|+|+|+++ +|++++ .|++|+|||+...
T Consensus 290 D~~V~iwd~~~~~~~~~~~~gH~~~V~~v~fSpdg~-~laS~S--~D~tvrvw~ip~~ 344 (365)
T 4h5i_A 290 DNSIALVKLKDLSMSKIFKQAHSFAITEVTISPDST-YVASVS--AANTIHIIKLPLN 344 (365)
T ss_dssp TSCEEEEETTTTEEEEEETTSSSSCEEEEEECTTSC-EEEEEE--TTSEEEEEECCTT
T ss_pred CCEEEEEECCCCcEEEEecCcccCCEEEEEECCCCC-EEEEEe--CCCeEEEEEcCCC
Confidence 999999999999999885 68999999999999997 788887 8999999999653
No 109
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.96 E-value=3.6e-28 Score=243.87 Aligned_cols=227 Identities=11% Similarity=0.100 Sum_probs=183.9
Q ss_pred ceeEeecCC-CcEEEEEc-CCeEE---------------------------EEECCCCCeEEeEecCCCCCeEEEEEcCC
Q 014934 169 YLNLVDWSS-HNVLAVGL-GNCVY---------------------------LWNACSSKVTKLCDLGIDDSVCSVGWANR 219 (415)
Q Consensus 169 ~i~~l~ws~-~~~la~~~-d~~V~---------------------------iwd~~~~~~~~~~~~~~~~~V~~v~~sp~ 219 (415)
.+.+|+|+| +.++|+++ |++|+ .|++.+++....+.+.|.+.|.+++|+|+
T Consensus 17 ~v~sv~~SpDG~~iASas~D~TV~d~~~~~~l~gh~~~v~~V~FsPdg~~~~~~~~~~~~~~~~~~~~~~~V~~vawSPd 96 (588)
T 2j04_A 17 WKNNLTWARDGTLYLTTFPDISIGQPKYAKDINCNSKNLFHVKEFPLEFENKLDFELAQQNGLLNSQPVCYPRVCKPSPI 96 (588)
T ss_dssp SSCCEEECTTSCEEEECSSSEEEEEECCCSCCSSBGGGTEEEEEECCCCCCTTTTSCCCSSCSSTTSCSCCEEEEEECSS
T ss_pred cEEEEEECCCCCEEEEEcCCceeecccccceecCCCccEEEEEECCCCCcceEEEEeCCCceEeecCCCCcEEEEEECCC
Confidence 478899999 77888764 56673 12223333223334456788999999999
Q ss_pred CCeEEEEECCCcEEEEECCCCeeeEEecCCCc-----cEEEEEee--CCEEEEEeCCCcEEEEECCCCCc------cEEE
Q 014934 220 NTHLAVGTSHGKVQIWDASRCKRVRTMEGHRL-----RVGALAWS--SSLLSSGSRDKSILQRDIRAQED------FVSK 286 (415)
Q Consensus 220 g~~la~g~~dg~V~iwd~~~~~~~~~l~~h~~-----~V~~l~~~--~~~l~sgs~dg~I~iwd~~~~~~------~~~~ 286 (415)
|++||+++.||.|+|||.+. ++..+. |.. .|.+++|+ +++|++|+.||+|++||+..+.. .+..
T Consensus 97 G~~LAs~s~dg~V~iwd~~~--~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs~DGtVkIWd~~~~~l~~~~~i~l~t 173 (588)
T 2j04_A 97 DDWMAVLSNNGNVSVFKDNK--MLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGNEDGELQFFSIRKNSENTPEFYFESS 173 (588)
T ss_dssp SSCEEEEETTSCEEEEETTE--EEEECC-CSSCSTTTCEEEEEECSSSSCEEEEETTSEEEEEECCCCTTTCCCCEEEEE
T ss_pred CCEEEEEeCCCcEEEEeCCc--eeeecc-CCCccccccEEEEEEcCCCCEEEEEcCCCEEEEEECCCCccccccceeeee
Confidence 99999999999999999654 666677 665 49999999 58999999999999999988742 2455
Q ss_pred e----ccccCCeEEEEEeCCCCEEEEEeCCCcEEEEECCCCce---eEEe-ccCCCcEEEEEEcCCCCcEEEEEcCCCCC
Q 014934 287 L----SGHKSEVCGLKWSYDNRELASGGNDNRLFVWNQHSTQP---VLKY-CEHTAAVKAIAWSPHLHGLLASGGGTADR 358 (415)
Q Consensus 287 ~----~~h~~~V~~l~~spdg~~lasg~~dg~I~iwd~~~~~~---~~~~-~~h~~~V~~l~~sp~~~~llasggg~~d~ 358 (415)
+ .+|...|.+++|+||| ||+++.|+.|++||+.+++. ..++ .+|...|.+++|+ + ..+|+++ ++
T Consensus 174 i~~~~~gh~~~V~sVawSPdg--Laass~D~tVrlWd~~~~~~~~~~~tL~~~h~~~V~svaFs--g-~~LASa~---~~ 245 (588)
T 2j04_A 174 IRLSDAGSKDWVTHIVWYEDV--LVAALSNNSVFSMTVSASSHQPVSRMIQNASRRKITDLKIV--D-YKVVLTC---PG 245 (588)
T ss_dssp EECSCTTCCCCEEEEEEETTE--EEEEETTCCEEEECCCSSSSCCCEEEEECCCSSCCCCEEEE--T-TEEEEEC---SS
T ss_pred eecccccccccEEEEEEcCCc--EEEEeCCCeEEEEECCCCccccceeeecccccCcEEEEEEE--C-CEEEEEe---CC
Confidence 5 6788899999999999 88899999999999988763 3566 4788999999999 4 4777775 69
Q ss_pred eEEEEECCCCcE-EEEeeCCCCEEEEEE--CCCCCeEEEEEecCCCcEEEEECC
Q 014934 359 CIRFWNTTTNTH-LSCMDTGSQVCNLVW--SKNVNELVSTHGYSQNQIIVWRYP 409 (415)
Q Consensus 359 ~I~iwd~~t~~~-~~~~~~~~~V~~l~~--s~~~~~l~s~~g~~dg~I~vw~~~ 409 (415)
.|++||+.+++. .....|.+.|..+.| +|++..|++ ++.+|+ ++|.+.
T Consensus 246 tIkLWd~~~~~~~~~~~gh~~~V~~va~~~s~d~~~La~--a~edG~-klw~~d 296 (588)
T 2j04_A 246 YVHKIDLKNYSISSLKTGSLENFHIIPLNHEKESTILLM--SNKTSY-KVLLED 296 (588)
T ss_dssp EEEEEETTTTEEEEEECSCCSCCCEEEETTCSSCEEEEE--CSSCEE-EEEESS
T ss_pred eEEEEECCCCeEEEEEcCCCceEEEEEeeeCCCCCEEEE--EcCCCC-EEEeec
Confidence 999999999887 444478888999999 999999988 788999 999975
No 110
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.96 E-value=6.8e-29 Score=276.61 Aligned_cols=237 Identities=19% Similarity=0.254 Sum_probs=211.9
Q ss_pred cceeEeecCC-CcEEEEE-cCCeEEEEECCCCCeEEeEecCCCCCeEEEEEcCCCCeEEEEECCCcEEEEECCCCeeeEE
Q 014934 168 FYLNLVDWSS-HNVLAVG-LGNCVYLWNACSSKVTKLCDLGIDDSVCSVGWANRNTHLAVGTSHGKVQIWDASRCKRVRT 245 (415)
Q Consensus 168 ~~i~~l~ws~-~~~la~~-~d~~V~iwd~~~~~~~~~~~~~~~~~V~~v~~sp~g~~la~g~~dg~V~iwd~~~~~~~~~ 245 (415)
..+.+++|+| ++++++| .++.|++|+..+++...... +|...|++++|+|+|++|++|+.||.|++||+.+++.+.
T Consensus 962 ~~i~~~~~sp~g~~l~~g~~~g~i~i~d~~~~~~~~~~~-~h~~~v~~l~~s~dg~~l~s~~~dg~i~vwd~~~~~~~~- 1039 (1249)
T 3sfz_A 962 AQVSCCCLSPHLEYVAFGDEDGAIKIIELPNNRVFSSGV-GHKKAVRHIQFTADGKTLISSSEDSVIQVWNWQTGDYVF- 1039 (1249)
T ss_dssp SCEEEEEECTTSSEEEEEETTSCCEEEETTTTSCEEECC-CCSSCCCCEEECSSSSCEEEECSSSBEEEEETTTTEEEC-
T ss_pred CcEEEEEEcCCCCEEEEEcCCCCEEEEEcCCCceeeecc-cCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCceEE-
Confidence 3588999999 7777777 57899999999998877665 889999999999999999999999999999999987764
Q ss_pred ecCCCccEEEEEee-CCEEEEEeCCCcEEEEECCCCCccEEEeccccCCeEEEEEeCCCCEEEEEeCCCcEEEEECCCCc
Q 014934 246 MEGHRLRVGALAWS-SSLLSSGSRDKSILQRDIRAQEDFVSKLSGHKSEVCGLKWSYDNRELASGGNDNRLFVWNQHSTQ 324 (415)
Q Consensus 246 l~~h~~~V~~l~~~-~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~spdg~~lasg~~dg~I~iwd~~~~~ 324 (415)
+..|...|.+++|+ +..+++++.||.|++||+.++. ....+.+|...|.+++|+|++++|++|+.|+.|++||+.+++
T Consensus 1040 ~~~~~~~v~~~~~~~~~~l~~~~~dg~v~vwd~~~~~-~~~~~~~~~~~v~~~~~s~d~~~l~s~s~d~~v~iwd~~~~~ 1118 (1249)
T 3sfz_A 1040 LQAHQETVKDFRLLQDSRLLSWSFDGTVKVWNVITGR-IERDFTCHQGTVLSCAISSDATKFSSTSADKTAKIWSFDLLS 1118 (1249)
T ss_dssp CBCCSSCEEEEEECSSSEEEEEESSSEEEEEETTTTC-CCEEEECCSSCCCCEEECSSSSSCEEECCSSCCCEECSSSSS
T ss_pred EecCCCcEEEEEEcCCCcEEEEECCCcEEEEECCCCc-eeEEEcccCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCcc
Confidence 56799999999999 5789999999999999999887 577888999999999999999999999999999999999999
Q ss_pred eeEEeccCCCcEEEEEEcCCCCcEEEEEcCCCCCeEEEEECCCCcEEEEe----------eCCCCEEEEEECCCCCeEEE
Q 014934 325 PVLKYCEHTAAVKAIAWSPHLHGLLASGGGTADRCIRFWNTTTNTHLSCM----------DTGSQVCNLVWSKNVNELVS 394 (415)
Q Consensus 325 ~~~~~~~h~~~V~~l~~sp~~~~llasggg~~d~~I~iwd~~t~~~~~~~----------~~~~~V~~l~~s~~~~~l~s 394 (415)
++..+.+|...|.+++|+|++. +|++++ .||.|++||+.+++.+..+ .+...|.+++|+|++++|++
T Consensus 1119 ~~~~l~~h~~~v~~~~~s~dg~-~lat~~--~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~fs~dg~~l~s 1195 (1249)
T 3sfz_A 1119 PLHELKGHNGCVRCSAFSLDGI-LLATGD--DNGEIRIWNVSDGQLLHSCAPISVEEGTATHGGWVTDVCFSPDSKTLVS 1195 (1249)
T ss_dssp CSBCCCCCSSCEEEEEECSSSS-EEEEEE--TTSCCCEEESSSSCCCCCCCCCC-------CCSCCCEEEECTTSSCEEE
T ss_pred eeeeeccCCCcEEEEEECCCCC-EEEEEe--CCCEEEEEECCCCceEEEeccccccccccccCceEEEEEECCCCCEEEE
Confidence 9999999999999999999997 777776 8999999999999877654 36678999999999999988
Q ss_pred EEecCCCcEEEEECCCCccc
Q 014934 395 THGYSQNQIIVWRYPTMSKV 414 (415)
Q Consensus 395 ~~g~~dg~I~vw~~~s~~~l 414 (415)
++ |.|++||+.+++.+
T Consensus 1196 --~~--g~v~vwd~~~g~~~ 1211 (1249)
T 3sfz_A 1196 --AG--GYLKWWNVATGDSS 1211 (1249)
T ss_dssp --ES--SSEEEBCSSSCBCC
T ss_pred --CC--CeEEEEECCCCcee
Confidence 42 89999999887653
No 111
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.96 E-value=1.5e-27 Score=225.78 Aligned_cols=241 Identities=13% Similarity=0.131 Sum_probs=177.9
Q ss_pred cCCCCCCCcceeEeecCC-Cc---EEEEEcCCeEEEEECCCC---CeEEeEecCCC------------------------
Q 014934 160 DAPALQDDFYLNLVDWSS-HN---VLAVGLGNCVYLWNACSS---KVTKLCDLGID------------------------ 208 (415)
Q Consensus 160 d~~~l~~~~~i~~l~ws~-~~---~la~~~d~~V~iwd~~~~---~~~~~~~~~~~------------------------ 208 (415)
..|.-.....+.++-|-. +. .++++.+..|.+|+..++ +...... .|.
T Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~lw~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~~~~~~~~~ 110 (356)
T 2w18_A 32 KNPSGSCSVDVSAMFWERAGCKEPCIITACEDVVSLWKALDAWQWEKLYTWH-FAEVPVLQIVPVPDVYNLVCVALGNLE 110 (356)
T ss_dssp CCCCSSCEEEEEEEEEC----CEEEEEEEESSEEEEEEESSSSBEEEEEEEE-CCSSCEEEECCCTTCCSCEEEEECSSS
T ss_pred cCCCCCeEEEEeeeeeccCCCCccEEEEeccceEEEcccCCCccceeeEEEe-ccCceeEEEEEcCcccceeeeeecccc
Confidence 334333334577788876 32 778888999999999988 4444433 222
Q ss_pred -CCeEEEEEcCC----CCeEEEEEC--------------------CCcEEEEEC-CCCeeeEEecCCCccEEEEEeeC--
Q 014934 209 -DSVCSVGWANR----NTHLAVGTS--------------------HGKVQIWDA-SRCKRVRTMEGHRLRVGALAWSS-- 260 (415)
Q Consensus 209 -~~V~~v~~sp~----g~~la~g~~--------------------dg~V~iwd~-~~~~~~~~l~~h~~~V~~l~~~~-- 260 (415)
..|.+++++|+ ++++++++. |+.|++|++ .+++.+..+.+|...+..++|++
T Consensus 111 ~~~v~sla~spd~~~~~~~l~s~g~~~~v~~l~~g~lv~ss~~g~d~~V~~~~~s~dG~~~~s~~~~~~~v~~l~fs~~~ 190 (356)
T 2w18_A 111 IREIRALFCSSDDESEKQVLLKSGNIKAVLGLTKRRLVSSSGTLSDQQVEVMTFAEDGGGKENQFLMPPEETILTFAEVQ 190 (356)
T ss_dssp EEEEEEECC------CCEEEEEEEEEEEEEEETTTEEEEEESSSTTCEEEEEEECTTSCEEEEEEECCCSSCEEEEEEEE
T ss_pred ccceEEEEECCCccccccEEEeCCCeEEEEecCCCcEEEecccCCCCcEEEEEECCCCceeeeeccCCCceeeEEeeccC
Confidence 25778888889 888887663 778888888 44777777777777777777763
Q ss_pred ---CEEEEEeCCCcEEEEECCCCCccEEEecccc---CCeEEEEEeCCCCEE------------EEEeCCCcEEEEECCC
Q 014934 261 ---SLLSSGSRDKSILQRDIRAQEDFVSKLSGHK---SEVCGLKWSYDNREL------------ASGGNDNRLFVWNQHS 322 (415)
Q Consensus 261 ---~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~---~~V~~l~~spdg~~l------------asg~~dg~I~iwd~~~ 322 (415)
..|++|+.|++|++||+.+++ .+..+.+|. ..+++++|+|+|.++ ++|+.|++|++||..+
T Consensus 191 g~~~~LaSgS~D~TIkIWDl~TGk-~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~t 269 (356)
T 2w18_A 191 GMQEALLGTTIMNNIVIWNLKTGQ-LLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKT 269 (356)
T ss_dssp TSTTEEEEEETTSEEEEEETTTCC-EEEEEECCC---CCCEEEEEEETTEEEEEEC------------CCEEEEEEETTT
T ss_pred CCCceEEEecCCCcEEEEECCCCc-EEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEECCC
Confidence 789999999999999999987 577777654 468888999999886 6688899999999999
Q ss_pred CceeEEe-----ccCCCcEEEEEEcCCCCcEEEEEcCCCCCeEEEEECCCCcEEEEee-CCCCE-EEEEECCCCCeEEEE
Q 014934 323 TQPVLKY-----CEHTAAVKAIAWSPHLHGLLASGGGTADRCIRFWNTTTNTHLSCMD-TGSQV-CNLVWSKNVNELVST 395 (415)
Q Consensus 323 ~~~~~~~-----~~h~~~V~~l~~sp~~~~llasggg~~d~~I~iwd~~t~~~~~~~~-~~~~V-~~l~~s~~~~~l~s~ 395 (415)
++.+..+ .+|...+.+..++ +. ++++++ .|++|+|||+.+|+++.++. |...+ ..++|+|+|++|++
T Consensus 270 gk~l~v~~~~~p~Gh~~~~lsg~~s--g~-~lASgS--~DgTIkIWDl~tGk~l~tL~gH~~~vvs~vafSPDG~~LaS- 343 (356)
T 2w18_A 270 TLSVGVMLYCLPPGQAGRFLEGDVK--DH-CAAAIL--TSGTIAIWDLLLGQCTALLPPVSDQHWSFVKWSGTDSHLLA- 343 (356)
T ss_dssp TEEEEEEEECCCTTCCCCEEEEEEE--TT-EEEEEE--TTSCEEEEETTTCSEEEEECCC--CCCCEEEECSSSSEEEE-
T ss_pred CEEEEEEEeeccCCCcceeEccccC--CC-EEEEEc--CCCcEEEEECCCCcEEEEecCCCCCeEEEEEECCCCCEEEE-
Confidence 9887665 3676665555554 43 788887 89999999999999999997 44444 46899999999999
Q ss_pred EecCCCcEEEEECC
Q 014934 396 HGYSQNQIIVWRYP 409 (415)
Q Consensus 396 ~g~~dg~I~vw~~~ 409 (415)
|+.|++|+|||+.
T Consensus 344 -GS~D~TIklWd~~ 356 (356)
T 2w18_A 344 -GQKDGNIFVYHYS 356 (356)
T ss_dssp -ECTTSCEEEEEEC
T ss_pred -EECCCcEEEecCC
Confidence 8899999999963
No 112
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.96 E-value=4.3e-28 Score=236.17 Aligned_cols=221 Identities=16% Similarity=0.252 Sum_probs=189.2
Q ss_pred CCeEEEEECCCCCeEEeEecCCCCCeEEEEEcC-CCCeEEEEECCCcEEEEECCCCeeeEEec-------------CCCc
Q 014934 186 GNCVYLWNACSSKVTKLCDLGIDDSVCSVGWAN-RNTHLAVGTSHGKVQIWDASRCKRVRTME-------------GHRL 251 (415)
Q Consensus 186 d~~V~iwd~~~~~~~~~~~~~~~~~V~~v~~sp-~g~~la~g~~dg~V~iwd~~~~~~~~~l~-------------~h~~ 251 (415)
+..+++|+...++....+. +|.+.|++++|+| ++++||+|+.||.|++||+.+++....+. +|..
T Consensus 22 ~~~~~v~~~~~~~~~~~~~-~h~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (408)
T 4a11_B 22 ESTRRVLGLELNKDRDVER-IHGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRY 100 (408)
T ss_dssp HHHHHHHTEEECTTEEECC-CCSSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSS
T ss_pred cCcceeeccccCcceeeee-ccCCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCC
Confidence 3456778777777766665 7999999999999 99999999999999999998876544432 5999
Q ss_pred cEEEEEeeC---CEEEEEeCCCcEEEEECCCCCccEEEeccccCCeEEEEEeC---CCCEEEEEeCCCcEEEEECCCCce
Q 014934 252 RVGALAWSS---SLLSSGSRDKSILQRDIRAQEDFVSKLSGHKSEVCGLKWSY---DNRELASGGNDNRLFVWNQHSTQP 325 (415)
Q Consensus 252 ~V~~l~~~~---~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~sp---dg~~lasg~~dg~I~iwd~~~~~~ 325 (415)
.|.+++|++ .+|++++.||.|++||++... ....+. +...+.++.|+| ++.+|++|+.|+.|++||+++++.
T Consensus 101 ~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~ 178 (408)
T 4a11_B 101 SVETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQ-TADVFN-FEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSC 178 (408)
T ss_dssp CEEEEEECTTCTTCEEEEETTSEEEEEETTTTE-EEEEEE-CSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCC
T ss_pred cEEEEEEccCCCcEEEEEeCCCeEEEeeCCCCc-cceecc-CCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcce
Confidence 999999984 589999999999999999876 344443 778899999998 445999999999999999999999
Q ss_pred eEEeccCCCcEEEEEEcCCCCcEEEEEcCCCCCeEEEEECCCCc-EEEEe----------------eCCCCEEEEEECCC
Q 014934 326 VLKYCEHTAAVKAIAWSPHLHGLLASGGGTADRCIRFWNTTTNT-HLSCM----------------DTGSQVCNLVWSKN 388 (415)
Q Consensus 326 ~~~~~~h~~~V~~l~~sp~~~~llasggg~~d~~I~iwd~~t~~-~~~~~----------------~~~~~V~~l~~s~~ 388 (415)
+..+..|...|.+++|+|++.+++++++ .|+.|++||++++. .+..+ .+...|.+++|+|+
T Consensus 179 ~~~~~~~~~~v~~~~~~~~~~~ll~~~~--~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 256 (408)
T 4a11_B 179 SHILQGHRQEILAVSWSPRYDYILATAS--ADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSD 256 (408)
T ss_dssp CEEECCCCSCEEEEEECSSCTTEEEEEE--TTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTT
T ss_pred eeeecCCCCcEEEEEECCCCCcEEEEEc--CCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcCC
Confidence 9999999999999999999998888887 89999999998765 33333 35678999999999
Q ss_pred CCeEEEEEecCCCcEEEEECCCCcc
Q 014934 389 VNELVSTHGYSQNQIIVWRYPTMSK 413 (415)
Q Consensus 389 ~~~l~s~~g~~dg~I~vw~~~s~~~ 413 (415)
+++|++ ++.||.|++||+.+.+.
T Consensus 257 ~~~l~~--~~~dg~i~vwd~~~~~~ 279 (408)
T 4a11_B 257 GLHLLT--VGTDNRMRLWNSSNGEN 279 (408)
T ss_dssp SSEEEE--EETTSCEEEEETTTCCB
T ss_pred CCEEEE--ecCCCeEEEEECCCCcc
Confidence 999999 77899999999988764
No 113
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.96 E-value=4.1e-27 Score=254.18 Aligned_cols=232 Identities=12% Similarity=0.137 Sum_probs=191.2
Q ss_pred cceeEeecCC-CcEEEEE-cCCeEEEEECCCCCeEEeEecCCCCCeEEEEEcCCCCeEEEEECCCcEEEEECCCCeeeEE
Q 014934 168 FYLNLVDWSS-HNVLAVG-LGNCVYLWNACSSKVTKLCDLGIDDSVCSVGWANRNTHLAVGTSHGKVQIWDASRCKRVRT 245 (415)
Q Consensus 168 ~~i~~l~ws~-~~~la~~-~d~~V~iwd~~~~~~~~~~~~~~~~~V~~v~~sp~g~~la~g~~dg~V~iwd~~~~~~~~~ 245 (415)
..|++++|+| +.+||+| .|+.|+||+..+.+.... ..|...|.+++|+| |++|++++.|++|+|||+.+++.+..
T Consensus 18 ~~V~~lafspdg~~lAsgs~Dg~I~lw~~~~~~~~~~--~~~~~~V~~l~fsp-g~~L~S~s~D~~v~lWd~~~~~~~~~ 94 (902)
T 2oaj_A 18 SKPIAAAFDFTQNLLAIATVTGEVHIYGQQQVEVVIK--LEDRSAIKEMRFVK-GIYLVVINAKDTVYVLSLYSQKVLTT 94 (902)
T ss_dssp SCEEEEEEETTTTEEEEEETTSEEEEECSTTCEEEEE--CSSCCCEEEEEEET-TTEEEEEETTCEEEEEETTTCSEEEE
T ss_pred CCcEEEEECCCCCEEEEEeCCCEEEEEeCCCcEEEEE--cCCCCCEEEEEEcC-CCEEEEEECcCeEEEEECCCCcEEEE
Confidence 3589999999 7888888 589999999887665443 36788999999999 88999999999999999999998888
Q ss_pred ecCCCccEEEEEee--CCEEEEEeCCCcEEEEECCCCCccE----------EEeccccCCeEEEEEeCC-CCEEEEEeCC
Q 014934 246 MEGHRLRVGALAWS--SSLLSSGSRDKSILQRDIRAQEDFV----------SKLSGHKSEVCGLKWSYD-NRELASGGND 312 (415)
Q Consensus 246 l~~h~~~V~~l~~~--~~~l~sgs~dg~I~iwd~~~~~~~~----------~~~~~h~~~V~~l~~spd-g~~lasg~~d 312 (415)
+. |...|.+++|+ +++|++|+.||.|++||++...... ..+.+|...|.+++|+|+ +.+|++|+.|
T Consensus 95 ~~-~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~l~~g~~d 173 (902)
T 2oaj_A 95 VF-VPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQWNPRDIGTVLISYEY 173 (902)
T ss_dssp EE-CSSCEEEEECCTTCSEEEEEETTSCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEEEETTEEEEEEEECSS
T ss_pred Ec-CCCCEEEEEECCCCCEEEEEcCCCcEEEEECCCCccccceeccccccccccccCCCCeEEEEEccCCCCEEEEEeCC
Confidence 86 77899999998 5899999999999999998775211 123678999999999996 5789999999
Q ss_pred CcEEEEECCCCceeEEeccC------------------CCcEEEEEEcCCCCcEEEEEcCCCCCeEEEEECCCCcEEEE-
Q 014934 313 NRLFVWNQHSTQPVLKYCEH------------------TAAVKAIAWSPHLHGLLASGGGTADRCIRFWNTTTNTHLSC- 373 (415)
Q Consensus 313 g~I~iwd~~~~~~~~~~~~h------------------~~~V~~l~~sp~~~~llasggg~~d~~I~iwd~~t~~~~~~- 373 (415)
+.| +||+++++++..+..| ...|.+++|+|++. +|++++ .|+.|++||+.+++++..
T Consensus 174 g~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~-~lasgs--~Dg~i~lWd~~~g~~~~~r 249 (902)
T 2oaj_A 174 VTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSL-HIITIH--EDNSLVFWDANSGHMIMAR 249 (902)
T ss_dssp CEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSS-EEEEEE--TTCCEEEEETTTCCEEEEE
T ss_pred CcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCC-EEEEEE--CCCeEEEEECCCCcEEEEE
Confidence 999 9999999988888765 57799999999987 777777 899999999999988764
Q ss_pred -ee-----------------CCCCEEEEEEC----CCCCeEEEEEecCC-----CcEEEEEC
Q 014934 374 -MD-----------------TGSQVCNLVWS----KNVNELVSTHGYSQ-----NQIIVWRY 408 (415)
Q Consensus 374 -~~-----------------~~~~V~~l~~s----~~~~~l~s~~g~~d-----g~I~vw~~ 408 (415)
+. +...|.+++|+ |++..++++ |+.+ +.|.+|++
T Consensus 250 ~l~~~~~~~~~~~~~~~~~~~~~~V~~v~w~~~~~pd~~~ll~s-g~~~~~~~~~~v~~~~~ 310 (902)
T 2oaj_A 250 TVFETEINVPQPDYIRDSSTNAAKISKVYWMCENNPEYTSLLIS-HKSISRGDNQSLTMIDL 310 (902)
T ss_dssp CSSCSCTTSCCTTCCCCCSSCCCEEEEEEEEECSSTTEEEEEEE-EECSTTSSCCCEEEEEE
T ss_pred eecccccCCCCCcCCCCCccccCCeeEEEEEecCCCCCCEEEEe-CCCCCCCCCceEEEEec
Confidence 21 12369999995 454455444 4333 37888884
No 114
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.96 E-value=3.2e-27 Score=223.89 Aligned_cols=203 Identities=17% Similarity=0.315 Sum_probs=174.5
Q ss_pred cCCCCCeEEEEEcCCCCeEEEEECCCcEEEEECCCC----eeeEEecCCCccEEEEEee----CCEEEEEeCCCcEEEEE
Q 014934 205 LGIDDSVCSVGWANRNTHLAVGTSHGKVQIWDASRC----KRVRTMEGHRLRVGALAWS----SSLLSSGSRDKSILQRD 276 (415)
Q Consensus 205 ~~~~~~V~~v~~sp~g~~la~g~~dg~V~iwd~~~~----~~~~~l~~h~~~V~~l~~~----~~~l~sgs~dg~I~iwd 276 (415)
.+|.+.|++++|+|++++||+|+.||.|++||+.++ +.+..+.+|...|.+++|+ +.+|++|+.||.|++||
T Consensus 8 ~gH~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~vwd 87 (351)
T 3f3f_A 8 SGHDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVKLWE 87 (351)
T ss_dssp CCCSSCEEEEEECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEEEEE
T ss_pred cccccceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEEEEe
Confidence 389999999999999999999999999999999876 5677788999999999997 47999999999999999
Q ss_pred CCCCC--------ccEEEeccccCCeEEEEEeCC--CCEEEEEeCCCcEEEEECCCCceeEEec-------------cCC
Q 014934 277 IRAQE--------DFVSKLSGHKSEVCGLKWSYD--NRELASGGNDNRLFVWNQHSTQPVLKYC-------------EHT 333 (415)
Q Consensus 277 ~~~~~--------~~~~~~~~h~~~V~~l~~spd--g~~lasg~~dg~I~iwd~~~~~~~~~~~-------------~h~ 333 (415)
++.+. .....+.+|...|.+++|+|+ +++|++++.||.|++||+++++.+..+. .|.
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (351)
T 3f3f_A 88 EDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPANHL 167 (351)
T ss_dssp ECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCCSSCS
T ss_pred cCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhccccccccccccccccCCcc
Confidence 98764 346778899999999999999 9999999999999999998876544332 588
Q ss_pred CcEEEEEEcCC--CCcEEEEEcCCCCCeEEEEECCCCcE--EEEee-CCCCEEEEEECCCC----CeEEEEEecCCCcEE
Q 014934 334 AAVKAIAWSPH--LHGLLASGGGTADRCIRFWNTTTNTH--LSCMD-TGSQVCNLVWSKNV----NELVSTHGYSQNQII 404 (415)
Q Consensus 334 ~~V~~l~~sp~--~~~llasggg~~d~~I~iwd~~t~~~--~~~~~-~~~~V~~l~~s~~~----~~l~s~~g~~dg~I~ 404 (415)
..+.+++|+|+ ...++++++ .|+.+.+|+...++. +..+. +...|.+++|+|++ ++|++ |+.||.|+
T Consensus 168 ~~~~~~~~~p~~~~~~~l~~~~--~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s--~~~dg~i~ 243 (351)
T 3f3f_A 168 QSDFCLSWCPSRFSPEKLAVSA--LEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIAT--GCKDGRIR 243 (351)
T ss_dssp CCCEEEEECCCSSSCCEEEEEE--TTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEE--EETTSCEE
T ss_pred cceeEEEeccCCCCCcEEEEec--CCCcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceEEEE--EcCCCeEE
Confidence 89999999997 234677766 799999998888775 44443 67889999999998 67877 77999999
Q ss_pred EEECCCC
Q 014934 405 VWRYPTM 411 (415)
Q Consensus 405 vw~~~s~ 411 (415)
+||+.+.
T Consensus 244 iwd~~~~ 250 (351)
T 3f3f_A 244 IFKITEK 250 (351)
T ss_dssp EEEEEEC
T ss_pred EEeCCCC
Confidence 9998764
No 115
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.96 E-value=1.5e-27 Score=229.23 Aligned_cols=231 Identities=9% Similarity=0.042 Sum_probs=178.5
Q ss_pred eeEeecCCCcEEEEEcCCeEEEEECC---------CCCeEEeEecCCCCCeEEEEEcC--CCCeEEEEECCCcEEEEECC
Q 014934 170 LNLVDWSSHNVLAVGLGNCVYLWNAC---------SSKVTKLCDLGIDDSVCSVGWAN--RNTHLAVGTSHGKVQIWDAS 238 (415)
Q Consensus 170 i~~l~ws~~~~la~~~d~~V~iwd~~---------~~~~~~~~~~~~~~~V~~v~~sp--~g~~la~g~~dg~V~iwd~~ 238 (415)
++++.|+|. +++++.|+.|++|+.. ++++......+|.+.|.+++|+| ++++|++|+.||.|++||+.
T Consensus 79 v~~~~~~~~-~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~ 157 (343)
T 3lrv_A 79 PRTGGEHPA-IISRGPCNRLLLLYPGNQITILDSKTNKVLREIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYE 157 (343)
T ss_dssp CCTTCCCCS-EEEECSTTEEEEEETTTEEEEEETTTCCEEEEEECCCSSCEEEEECCC---CCEEEEEETTCCEEEEESS
T ss_pred ceeeeeCCc-eEEecCCCeEEEEEccCceEEeecCCcceeEEeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECC
Confidence 456677777 5555578888888554 66666666667888999999999 99999999999999999999
Q ss_pred CCeeeEEec-CCCccEEEEEee--CCEEEEEeCCCcEEEEECCCCCccEEEecc-ccCCeEEEEEeCCCCEEEEEeCCCc
Q 014934 239 RCKRVRTME-GHRLRVGALAWS--SSLLSSGSRDKSILQRDIRAQEDFVSKLSG-HKSEVCGLKWSYDNRELASGGNDNR 314 (415)
Q Consensus 239 ~~~~~~~l~-~h~~~V~~l~~~--~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~-h~~~V~~l~~spdg~~lasg~~dg~ 314 (415)
+++.+.... .|...|.+++|+ +.+|++|+.||.|++||++++......+.. |...|.+++|+|++.+|++++ |+.
T Consensus 158 ~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~-~~~ 236 (343)
T 3lrv_A 158 DDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPDGILDVYNLSSPDQASSRFPVDEEAKIKEVKFADNGYWMVVEC-DQT 236 (343)
T ss_dssp SSCEEEEECCCSSCCCCEEEECTTSCEEEEECTTSCEEEEESSCTTSCCEECCCCTTSCEEEEEECTTSSEEEEEE-SSB
T ss_pred CCcEEEEEecCCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCCCCccEEeccCCCCEEEEEEeCCCCEEEEEe-CCe
Confidence 998877664 455689999998 579999999999999999998754367777 999999999999999999999 559
Q ss_pred EEEEECCCCceeEEecc---CCCcEE--EEEEcCCCCcEEEEEcCCCCCeEEEEECCCCcEEEEeeCCCCEEEEEECC--
Q 014934 315 LFVWNQHSTQPVLKYCE---HTAAVK--AIAWSPHLHGLLASGGGTADRCIRFWNTTTNTHLSCMDTGSQVCNLVWSK-- 387 (415)
Q Consensus 315 I~iwd~~~~~~~~~~~~---h~~~V~--~l~~sp~~~~llasggg~~d~~I~iwd~~t~~~~~~~~~~~~V~~l~~s~-- 387 (415)
|++||+++++.+..+.. |...+. +++|+|+++ +|+++++ .|+.|++|++.++...... .++..+.|.+
T Consensus 237 v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~l~~~s~-~d~~i~v~~~~~~~~~~~~---~~~~~~~~~~~~ 311 (343)
T 3lrv_A 237 VVCFDLRKDVGTLAYPTYTIPEFKTGTVTYDIDDSGK-NMIAYSN-ESNSLTIYKFDKKTKNWTK---DEESALCLQSDT 311 (343)
T ss_dssp EEEEETTSSTTCBSSCCCBC-----CCEEEEECTTSS-EEEEEET-TTTEEEEEEECTTTCSEEE---EEEEECCC----
T ss_pred EEEEEcCCCCcceeecccccccccccceEEEECCCCC-EEEEecC-CCCcEEEEEEcccccceEe---cCceeEecCccc
Confidence 99999999877655443 444444 699999998 5555431 4999999999766543332 5677788888
Q ss_pred -CCCeEEEEEecCCCcEEEEECC
Q 014934 388 -NVNELVSTHGYSQNQIIVWRYP 409 (415)
Q Consensus 388 -~~~~l~s~~g~~dg~I~vw~~~ 409 (415)
+...+++ ++.|+.+.++-..
T Consensus 312 ~~~~~l~~--~~~d~~~~~~~~~ 332 (343)
T 3lrv_A 312 ADFTDMDV--VCGDGGIAAILKT 332 (343)
T ss_dssp CCCCEEEE--EEETTEEEEEEEC
T ss_pred cccceeEE--EecCCceEEEEec
Confidence 7888888 5678888877543
No 116
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.96 E-value=2e-27 Score=256.56 Aligned_cols=202 Identities=12% Similarity=0.194 Sum_probs=176.3
Q ss_pred ecCCCCCeEEEEEcCCCCeEEEEECCCcEEEEECCCCeeeEEecCCCccEEEEEee-CCEEEEEeCCCcEEEEECCCCCc
Q 014934 204 DLGIDDSVCSVGWANRNTHLAVGTSHGKVQIWDASRCKRVRTMEGHRLRVGALAWS-SSLLSSGSRDKSILQRDIRAQED 282 (415)
Q Consensus 204 ~~~~~~~V~~v~~sp~g~~la~g~~dg~V~iwd~~~~~~~~~l~~h~~~V~~l~~~-~~~l~sgs~dg~I~iwd~~~~~~ 282 (415)
..+|.+.|++++|+|+|++||+|+.||.|+|||..+.+....+. |...|.+++|+ +.+|++++.|++|++||++++.
T Consensus 13 ~~gh~~~V~~lafspdg~~lAsgs~Dg~I~lw~~~~~~~~~~~~-~~~~V~~l~fspg~~L~S~s~D~~v~lWd~~~~~- 90 (902)
T 2oaj_A 13 KYGMSSKPIAAAFDFTQNLLAIATVTGEVHIYGQQQVEVVIKLE-DRSAIKEMRFVKGIYLVVINAKDTVYVLSLYSQK- 90 (902)
T ss_dssp EEECSSCEEEEEEETTTTEEEEEETTSEEEEECSTTCEEEEECS-SCCCEEEEEEETTTEEEEEETTCEEEEEETTTCS-
T ss_pred ccCCCCCcEEEEECCCCCEEEEEeCCCEEEEEeCCCcEEEEEcC-CCCCEEEEEEcCCCEEEEEECcCeEEEEECCCCc-
Confidence 34788999999999999999999999999999998877766554 78899999999 4679999999999999999876
Q ss_pred cEEEeccccCCeEEEEEeCCCCEEEEEeCCCcEEEEECCCCcee-----------EEeccCCCcEEEEEEcCCCCcEEEE
Q 014934 283 FVSKLSGHKSEVCGLKWSYDNRELASGGNDNRLFVWNQHSTQPV-----------LKYCEHTAAVKAIAWSPHLHGLLAS 351 (415)
Q Consensus 283 ~~~~~~~h~~~V~~l~~spdg~~lasg~~dg~I~iwd~~~~~~~-----------~~~~~h~~~V~~l~~sp~~~~llas 351 (415)
.+..+. |...|.+++|+|++++|++|+.||.|++||+.+++.. ..+.+|.+.|.+++|+|++..++++
T Consensus 91 ~~~~~~-~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~l~~ 169 (902)
T 2oaj_A 91 VLTTVF-VPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQWNPRDIGTVLI 169 (902)
T ss_dssp EEEEEE-CSSCEEEEECCTTCSEEEEEETTSCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEEEETTEEEEEEE
T ss_pred EEEEEc-CCCCEEEEEECCCCCEEEEEcCCCcEEEEECCCCccccceeccccccccccccCCCCeEEEEEccCCCCEEEE
Confidence 455554 6789999999999999999999999999999988653 2235789999999999986567888
Q ss_pred EcCCCCCeEEEEECCCCcEEEEeeCC-------------------CCEEEEEECCCCCeEEEEEecCCCcEEEEECCCCc
Q 014934 352 GGGTADRCIRFWNTTTNTHLSCMDTG-------------------SQVCNLVWSKNVNELVSTHGYSQNQIIVWRYPTMS 412 (415)
Q Consensus 352 ggg~~d~~I~iwd~~t~~~~~~~~~~-------------------~~V~~l~~s~~~~~l~s~~g~~dg~I~vw~~~s~~ 412 (415)
++ .|+.| +||+++++++..+... ..|.+++|+|+|++|++ |+.|+.|++||+.+++
T Consensus 170 g~--~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~las--gs~Dg~i~lWd~~~g~ 244 (902)
T 2oaj_A 170 SY--EYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIIT--IHEDNSLVFWDANSGH 244 (902)
T ss_dssp EC--SSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEE--EETTCCEEEEETTTCC
T ss_pred Ee--CCCcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEE--EECCCeEEEEECCCCc
Confidence 76 89999 9999999988877533 67999999999999999 7899999999998865
Q ss_pred c
Q 014934 413 K 413 (415)
Q Consensus 413 ~ 413 (415)
.
T Consensus 245 ~ 245 (902)
T 2oaj_A 245 M 245 (902)
T ss_dssp E
T ss_pred E
Confidence 4
No 117
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.96 E-value=8.3e-26 Score=219.94 Aligned_cols=238 Identities=13% Similarity=0.063 Sum_probs=196.9
Q ss_pred ceeEeecCC-CcEE-EEE-cCCeEEEEECCCCCeEEeEecCCCCCeEEEEEcCCCCeEEEEE-CCCcEEEEECCCCeeeE
Q 014934 169 YLNLVDWSS-HNVL-AVG-LGNCVYLWNACSSKVTKLCDLGIDDSVCSVGWANRNTHLAVGT-SHGKVQIWDASRCKRVR 244 (415)
Q Consensus 169 ~i~~l~ws~-~~~l-a~~-~d~~V~iwd~~~~~~~~~~~~~~~~~V~~v~~sp~g~~la~g~-~dg~V~iwd~~~~~~~~ 244 (415)
.+.+++|+| +..| +++ .++.|++||..+++....+.. ...+.+++|+|+|++|++++ .++.|++||+.+++.+.
T Consensus 33 ~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~--~~~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~ 110 (391)
T 1l0q_A 33 NPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPA--GSSPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAG 110 (391)
T ss_dssp SEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEEC--SSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEE
T ss_pred CcceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEEC--CCCccceEECCCCCEEEEEECCCCEEEEEECCCCeEEE
Confidence 378999999 5555 455 589999999999998877753 34999999999999886555 56999999999999888
Q ss_pred EecCCCccEEEEEeeC--CEE-EEEeCCCcEEEEECCCCCccEEEeccccCCeEEEEEeCCCCEE-EEEeCCCcEEEEEC
Q 014934 245 TMEGHRLRVGALAWSS--SLL-SSGSRDKSILQRDIRAQEDFVSKLSGHKSEVCGLKWSYDNREL-ASGGNDNRLFVWNQ 320 (415)
Q Consensus 245 ~l~~h~~~V~~l~~~~--~~l-~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~spdg~~l-asg~~dg~I~iwd~ 320 (415)
.+..+ ..+.+++|++ +.| ++++.|+.|++||+++++ ....+..| ..+.+++|+|++++| ++++.++.|++||+
T Consensus 111 ~~~~~-~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~-~~~~~~~~-~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~ 187 (391)
T 1l0q_A 111 TVKTG-KSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKA-VINTVSVG-RSPKGIAVTPDGTKVYVANFDSMSISVIDT 187 (391)
T ss_dssp EEECS-SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTE-EEEEEECC-SSEEEEEECTTSSEEEEEETTTTEEEEEET
T ss_pred EEeCC-CCcceEEECCCCCEEEEEeCCCCEEEEEECCCCc-EEEEEecC-CCcceEEECCCCCEEEEEeCCCCEEEEEEC
Confidence 88754 4689999984 455 788889999999998876 45555544 567999999999987 57788999999999
Q ss_pred CCCceeEEeccCCCcEEEEEEcCCCCcEEEEEcCCCCCeEEEEECCCCcEEEEeeCCCCEEEEEECCCCCeEEEEEecCC
Q 014934 321 HSTQPVLKYCEHTAAVKAIAWSPHLHGLLASGGGTADRCIRFWNTTTNTHLSCMDTGSQVCNLVWSKNVNELVSTHGYSQ 400 (415)
Q Consensus 321 ~~~~~~~~~~~h~~~V~~l~~sp~~~~llasggg~~d~~I~iwd~~t~~~~~~~~~~~~V~~l~~s~~~~~l~s~~g~~d 400 (415)
++++.+..+ .+...+.+++|+|+++.+++++.+..++.|++||+.+++.+..+..+..+.+++|+|++++|+++ +..|
T Consensus 188 ~~~~~~~~~-~~~~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~s-~~~d 265 (391)
T 1l0q_A 188 VTNSVIDTV-KVEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKITARIPVGPDPAGIAVTPDGKKVYVA-LSFX 265 (391)
T ss_dssp TTTEEEEEE-ECSSEEEEEEECTTSSEEEEEEECSSCCEEEEEETTTTEEEEEEECCSSEEEEEECTTSSEEEEE-ETTT
T ss_pred CCCeEEEEE-ecCCCccceEECCCCCEEEEEecCcCCCcEEEEECCCCeEEEEEecCCCccEEEEccCCCEEEEE-cCCC
Confidence 999887777 45678999999999987777653224899999999999999998888889999999999988654 5789
Q ss_pred CcEEEEECCCCcc
Q 014934 401 NQIIVWRYPTMSK 413 (415)
Q Consensus 401 g~I~vw~~~s~~~ 413 (415)
+.|++||+.+++.
T Consensus 266 ~~v~v~d~~~~~~ 278 (391)
T 1l0q_A 266 NTVSVIDTATNTI 278 (391)
T ss_dssp TEEEEEETTTTEE
T ss_pred CEEEEEECCCCcE
Confidence 9999999988653
No 118
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.96 E-value=2.5e-26 Score=226.75 Aligned_cols=239 Identities=13% Similarity=0.048 Sum_probs=201.5
Q ss_pred eeEeecCC-CcEEEEEc-CCeEEEEECCCCCeEEeEec----CCCCCeEEEEEcCCCCeEEEEECCCcEEEEECCCCeee
Q 014934 170 LNLVDWSS-HNVLAVGL-GNCVYLWNACSSKVTKLCDL----GIDDSVCSVGWANRNTHLAVGTSHGKVQIWDASRCKRV 243 (415)
Q Consensus 170 i~~l~ws~-~~~la~~~-d~~V~iwd~~~~~~~~~~~~----~~~~~V~~v~~sp~g~~la~g~~dg~V~iwd~~~~~~~ 243 (415)
+.+++|+| +.+++++. ++.|++||..+++....... +|...|.+++|+++|.++++++.||.|++||+.+++.+
T Consensus 125 ~~~~~~s~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~~~~ 204 (433)
T 3bws_A 125 PKSVRFIDNTRLAIPLLEDEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQMQANAVHVFDLKTLAYK 204 (433)
T ss_dssp BCCCEESSSSEEEEEBTTSSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEGGGTEEEEEETTTCCEE
T ss_pred ceEEEEeCCCeEEEEeCCCCeEEEEECCCCeEeeecCcccccccCCceeEEEEcCCCEEEEEECCCCEEEEEECCCceEE
Confidence 55889998 45555554 56899999999988764432 67789999999999999999999999999999999999
Q ss_pred EEecCCCccEEEEEeeC--CEE-EEEeCCCcEEEEECCCCCccEEEeccccCCeEEEEEeCCCCEEEEEe--------CC
Q 014934 244 RTMEGHRLRVGALAWSS--SLL-SSGSRDKSILQRDIRAQEDFVSKLSGHKSEVCGLKWSYDNRELASGG--------ND 312 (415)
Q Consensus 244 ~~l~~h~~~V~~l~~~~--~~l-~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~spdg~~lasg~--------~d 312 (415)
..+..|...+.+++|++ ..+ ++++.|+.|++||++++. .+..+.. ...+.+++|+|++++|++++ .|
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~-~~~~~~~-~~~~~~~~~~~~g~~l~~~~~~~~~~~~~d 282 (433)
T 3bws_A 205 ATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKL-EIRKTDK-IGLPRGLLLSKDGKELYIAQFSASNQESGG 282 (433)
T ss_dssp EEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTE-EEEECCC-CSEEEEEEECTTSSEEEEEEEESCTTCSCC
T ss_pred EEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCc-EEEEecC-CCCceEEEEcCCCCEEEEEECCCCccccCC
Confidence 99988999999999994 555 566689999999999876 4555554 45599999999999999988 58
Q ss_pred CcEEEEECCCCceeEEeccCCCcEEEEEEcCCCCcEEEEEcCCCCCeEEEEECCCCcEEEEeeCCCCEEEEEECCCCCeE
Q 014934 313 NRLFVWNQHSTQPVLKYCEHTAAVKAIAWSPHLHGLLASGGGTADRCIRFWNTTTNTHLSCMDTGSQVCNLVWSKNVNEL 392 (415)
Q Consensus 313 g~I~iwd~~~~~~~~~~~~h~~~V~~l~~sp~~~~llasggg~~d~~I~iwd~~t~~~~~~~~~~~~V~~l~~s~~~~~l 392 (415)
+.|++||+.+++.+..+ .|...+.+++|+|+++.++++++ .|+.|++||+.+++.+..+.+...+.+++|+|+++.|
T Consensus 283 g~i~~~d~~~~~~~~~~-~~~~~~~~~~~~~~g~~l~~~~~--~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l 359 (433)
T 3bws_A 283 GRLGIYSMDKEKLIDTI-GPPGNKRHIVSGNTENKIYVSDM--CCSKIEVYDLKEKKVQKSIPVFDKPNTIALSPDGKYL 359 (433)
T ss_dssp EEEEEEETTTTEEEEEE-EEEECEEEEEECSSTTEEEEEET--TTTEEEEEETTTTEEEEEEECSSSEEEEEECTTSSEE
T ss_pred CeEEEEECCCCcEEeec-cCCCCcceEEECCCCCEEEEEec--CCCEEEEEECCCCcEEEEecCCCCCCeEEEcCCCCEE
Confidence 89999999998877665 56678999999999988888876 7999999999999999999888999999999999988
Q ss_pred EEEEecC-------------CCcEEEEECCCCcc
Q 014934 393 VSTHGYS-------------QNQIIVWRYPTMSK 413 (415)
Q Consensus 393 ~s~~g~~-------------dg~I~vw~~~s~~~ 413 (415)
+++.... ||.|++||..+++.
T Consensus 360 ~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~ 393 (433)
T 3bws_A 360 YVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTV 393 (433)
T ss_dssp EEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEE
T ss_pred EEEecCCCccccccccccccceEEEEEECCCCcE
Confidence 8853221 57999999988654
No 119
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.95 E-value=1.5e-26 Score=221.89 Aligned_cols=216 Identities=16% Similarity=0.251 Sum_probs=172.7
Q ss_pred EECCCCCeEEeEecCCCCCeEEEEEcCC---CCeEEEEECCCcEEEEECCC-Ceee-EEecCCCccEEEEEee--CCEEE
Q 014934 192 WNACSSKVTKLCDLGIDDSVCSVGWANR---NTHLAVGTSHGKVQIWDASR-CKRV-RTMEGHRLRVGALAWS--SSLLS 264 (415)
Q Consensus 192 wd~~~~~~~~~~~~~~~~~V~~v~~sp~---g~~la~g~~dg~V~iwd~~~-~~~~-~~l~~h~~~V~~l~~~--~~~l~ 264 (415)
|+....+....+. +|.+.|++++|+|+ |++|++|+.||.|+|||+.+ +..+ ..+.+|...|.+++|+ +++|+
T Consensus 24 ~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~ 102 (368)
T 3mmy_A 24 DNHNPMKDIEVTS-SPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVF 102 (368)
T ss_dssp CSSCTTCCEECSS-CCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEE
T ss_pred CCCCCcceeEecc-CCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEE
Confidence 3444444455544 88999999999999 69999999999999999987 5444 7788999999999998 47999
Q ss_pred EEeCCCcEEEEECCCCCccEEEeccccCCeEEEEE--eCCCCEEEEEeCCCcEEEEECCCCceeEEeccCC---------
Q 014934 265 SGSRDKSILQRDIRAQEDFVSKLSGHKSEVCGLKW--SYDNRELASGGNDNRLFVWNQHSTQPVLKYCEHT--------- 333 (415)
Q Consensus 265 sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~--spdg~~lasg~~dg~I~iwd~~~~~~~~~~~~h~--------- 333 (415)
+|+.||.|++||+++.. ...+..|...|.+++| +|++++|++|+.||.|++||+++++++..+..|.
T Consensus 103 s~~~dg~v~iwd~~~~~--~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~ 180 (368)
T 3mmy_A 103 TASCDKTAKMWDLSSNQ--AIQIAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPERCYCADVIY 180 (368)
T ss_dssp EEETTSEEEEEETTTTE--EEEEEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSCSEEEECSSCEEEEEEET
T ss_pred EEcCCCcEEEEEcCCCC--ceeeccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEEEEecCCCceEEEecC
Confidence 99999999999999876 3346679999999999 8999999999999999999999988777765443
Q ss_pred --------------------------------CcEEEEEEcCCCCc---EEEEEcCCCCCeEEEEECCCC---cEEEEee
Q 014934 334 --------------------------------AAVKAIAWSPHLHG---LLASGGGTADRCIRFWNTTTN---THLSCMD 375 (415)
Q Consensus 334 --------------------------------~~V~~l~~sp~~~~---llasggg~~d~~I~iwd~~t~---~~~~~~~ 375 (415)
..+.++++.+.... .+++++ .|+.|++||+... ..+..+.
T Consensus 181 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~dg~i~i~~~~~~~~~~~~~~~~ 258 (368)
T 3mmy_A 181 PMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGS--IEGRVAIHYINPPNPAKDNFTFK 258 (368)
T ss_dssp TEEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEE--TTSEEEEEESSCSCHHHHSEEEE
T ss_pred CeeEEEeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEec--CCCcEEEEecCCCCccccceeee
Confidence 22334444433321 266665 7999999999887 4444544
Q ss_pred CCC-------------CEEEEEECCCCCeEEEEEecCCCcEEEEECCCCccc
Q 014934 376 TGS-------------QVCNLVWSKNVNELVSTHGYSQNQIIVWRYPTMSKV 414 (415)
Q Consensus 376 ~~~-------------~V~~l~~s~~~~~l~s~~g~~dg~I~vw~~~s~~~l 414 (415)
... .|.+++|+|++++|++ |+.||.|++||+.+++.+
T Consensus 259 ~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s--~~~dg~i~iwd~~~~~~~ 308 (368)
T 3mmy_A 259 CHRSNGTNTSAPQDIYAVNGIAFHPVHGTLAT--VGSDGRFSFWDKDARTKL 308 (368)
T ss_dssp CSEEC----CCCEEECCEEEEEECTTTCCEEE--EETTSCEEEEETTTTEEE
T ss_pred eeecccccccccccccceEEEEEecCCCEEEE--EccCCeEEEEECCCCcEE
Confidence 322 6999999999999998 778999999999987643
No 120
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.95 E-value=2.2e-26 Score=222.62 Aligned_cols=229 Identities=14% Similarity=0.150 Sum_probs=178.2
Q ss_pred eeEeecCC-CcEE-EEE-cCCeEEEEECCCCCeEEeEecCCCCCeEEEEEcCCCCeEEEEECCCcEEEEECCCC-eeeEE
Q 014934 170 LNLVDWSS-HNVL-AVG-LGNCVYLWNACSSKVTKLCDLGIDDSVCSVGWANRNTHLAVGTSHGKVQIWDASRC-KRVRT 245 (415)
Q Consensus 170 i~~l~ws~-~~~l-a~~-~d~~V~iwd~~~~~~~~~~~~~~~~~V~~v~~sp~g~~la~g~~dg~V~iwd~~~~-~~~~~ 245 (415)
+..++|.+ .+.+ +++ .++.|++||..+++....+. +...|.+++|++++ ++++ .++.|++||+.++ +.+..
T Consensus 61 ~~~~~~~~~~~~~~~~~~~d~~v~iWd~~~~~~~~~~~--~~~~v~~v~~~~~~--~~~~-~~~~i~i~d~~~~~~~~~~ 135 (355)
T 3vu4_A 61 LSKVRMLHRTNYVAFVTGVKEVVHIWDDVKKQDVSRIK--VDAPVKDLFLSREF--IVVS-YGDVISVFKFGNPWKRITD 135 (355)
T ss_dssp CCEEEECTTSSEEEEECSSTTEEEEEETTTTEEEEEEE--CSSCEEEEEECSSE--EEEE-ETTEEEEEESSTTCCBSSC
T ss_pred eEEEEEcCCCCEEEEEECCccEEEEEECCCCcEEEEEE--CCCceEEEEEcCCE--EEEE-EcCEEEEEECCCCceeeEE
Confidence 44555655 4444 334 46799999999998877665 56799999998764 4444 4789999999988 66665
Q ss_pred ecCCCccEEEEEeeCCEEEE--EeCCCcEEEEECCCCC--------------cc-EEEeccccCCeEEEEEeCCCCEEEE
Q 014934 246 MEGHRLRVGALAWSSSLLSS--GSRDKSILQRDIRAQE--------------DF-VSKLSGHKSEVCGLKWSYDNRELAS 308 (415)
Q Consensus 246 l~~h~~~V~~l~~~~~~l~s--gs~dg~I~iwd~~~~~--------------~~-~~~~~~h~~~V~~l~~spdg~~las 308 (415)
+.. ....+++++..++. |+.||.|++||++... .+ +..+.+|...|.+++|+|+|++||+
T Consensus 136 ~~~---~~~~~~~s~~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s 212 (355)
T 3vu4_A 136 DIR---FGGVCEFSNGLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVAT 212 (355)
T ss_dssp CEE---EEEEEEEETTEEEEEESSCTTCEEEEECCC------------------CCEEECCCSSCEEEEEECTTSSEEEE
T ss_pred ecc---CCceEEEEccEEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEE
Confidence 554 44445555677776 5899999999998754 11 5778899999999999999999999
Q ss_pred EeCCCc-EEEEECCCCceeEEec-c-CCCcEEEEEEcCCCCcEEEEEcCCCCCeEEEEECCCCcEE--EE----------
Q 014934 309 GGNDNR-LFVWNQHSTQPVLKYC-E-HTAAVKAIAWSPHLHGLLASGGGTADRCIRFWNTTTNTHL--SC---------- 373 (415)
Q Consensus 309 g~~dg~-I~iwd~~~~~~~~~~~-~-h~~~V~~l~~sp~~~~llasggg~~d~~I~iwd~~t~~~~--~~---------- 373 (415)
|+.|++ |+|||+++++.+..+. + |...|.+++|+|++. +|++++ .|+.|++||+..+... ..
T Consensus 213 ~s~d~~~v~iwd~~~~~~~~~~~~g~h~~~v~~~~~s~~~~-~l~s~s--~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~ 289 (355)
T 3vu4_A 213 CSQDGTIIRVFKTEDGVLVREFRRGLDRADVVDMKWSTDGS-KLAVVS--DKWTLHVFEIFNDQDNKRHALKGWINMKYF 289 (355)
T ss_dssp EETTCSEEEEEETTTCCEEEEEECTTCCSCEEEEEECTTSC-EEEEEE--TTCEEEEEESSCCSCCCSEETTTTEECCCC
T ss_pred EeCCCCEEEEEECCCCcEEEEEEcCCCCCcEEEEEECCCCC-EEEEEE--CCCEEEEEEccCCCCcccccccceeecccc
Confidence 999998 9999999999999998 5 999999999999997 666766 7999999999765311 11
Q ss_pred ----------ee--CCCCEEEEEECCCCCeEEEEEecCCCcEEEEECCCC
Q 014934 374 ----------MD--TGSQVCNLVWSKNVNELVSTHGYSQNQIIVWRYPTM 411 (415)
Q Consensus 374 ----------~~--~~~~V~~l~~s~~~~~l~s~~g~~dg~I~vw~~~s~ 411 (415)
+. .....+.++|+++++.|++ +..||.+.+|++...
T Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~a~~~d~~~l~~--~~~dg~~~~~~~~~~ 337 (355)
T 3vu4_A 290 QSEWSLCNFKLSVDKHVRGCKIAWISESSLVVV--WPHTRMIETFKVVFD 337 (355)
T ss_dssp CCSSCSEEEECCCCTTCCCCEEEESSSSEEEEE--ETTTTEEEEEEEEEE
T ss_pred ccccceeEEEeccCCCCCceEEEEeCCCCEEEE--EeCCCeEEEEEEEcC
Confidence 11 1122467999999999999 788999999998653
No 121
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.95 E-value=3.5e-25 Score=218.48 Aligned_cols=236 Identities=14% Similarity=0.081 Sum_probs=197.4
Q ss_pred ceeEeecCC-CcEEEEE-cCCeEEEEECCCCCeEEeEecCCCCCeEEEEEcCCCCeEEEEE-CCCcEEEEECCCCeeeEE
Q 014934 169 YLNLVDWSS-HNVLAVG-LGNCVYLWNACSSKVTKLCDLGIDDSVCSVGWANRNTHLAVGT-SHGKVQIWDASRCKRVRT 245 (415)
Q Consensus 169 ~i~~l~ws~-~~~la~~-~d~~V~iwd~~~~~~~~~~~~~~~~~V~~v~~sp~g~~la~g~-~dg~V~iwd~~~~~~~~~ 245 (415)
.+++++|++ +.+++++ .++.|++||+.+++....+. .|...+.+++|+|+++++++++ .+|.|++||+.+++.+..
T Consensus 171 ~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~ 249 (433)
T 3bws_A 171 FVETISIPEHNELWVSQMQANAVHVFDLKTLAYKATVD-LTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRK 249 (433)
T ss_dssp EEEEEEEGGGTEEEEEEGGGTEEEEEETTTCCEEEEEE-CSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEE
T ss_pred ceeEEEEcCCCEEEEEECCCCEEEEEECCCceEEEEEc-CCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEE
Confidence 688999988 6777777 46999999999998877776 6788999999999999885554 799999999999998888
Q ss_pred ecCCCccEEEEEee--CCEEEEEe--------CCCcEEEEECCCCCccEEEeccccCCeEEEEEeCCCCEE-EEEeCCCc
Q 014934 246 MEGHRLRVGALAWS--SSLLSSGS--------RDKSILQRDIRAQEDFVSKLSGHKSEVCGLKWSYDNREL-ASGGNDNR 314 (415)
Q Consensus 246 l~~h~~~V~~l~~~--~~~l~sgs--------~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~spdg~~l-asg~~dg~ 314 (415)
+..+ ..+.+++|+ ++.|++++ .||.|++||++++. .... ..|...+.+++|+|+++.+ ++++.|+.
T Consensus 250 ~~~~-~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~-~~~~-~~~~~~~~~~~~~~~g~~l~~~~~~~~~ 326 (433)
T 3bws_A 250 TDKI-GLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEK-LIDT-IGPPGNKRHIVSGNTENKIYVSDMCCSK 326 (433)
T ss_dssp CCCC-SEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTE-EEEE-EEEEECEEEEEECSSTTEEEEEETTTTE
T ss_pred ecCC-CCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCc-EEee-ccCCCCcceEEECCCCCEEEEEecCCCE
Confidence 8754 459999998 46888887 58899999999875 3333 3566789999999999754 66789999
Q ss_pred EEEEECCCCceeEEeccCCCcEEEEEEcCCCCcEEEEEcCC------------CCCeEEEEECCCCcEEEEeeCCCCEEE
Q 014934 315 LFVWNQHSTQPVLKYCEHTAAVKAIAWSPHLHGLLASGGGT------------ADRCIRFWNTTTNTHLSCMDTGSQVCN 382 (415)
Q Consensus 315 I~iwd~~~~~~~~~~~~h~~~V~~l~~sp~~~~llasggg~------------~d~~I~iwd~~t~~~~~~~~~~~~V~~ 382 (415)
|++||+.+++.+..+. +...+.+++|+|+++.+++++.+. .||.|++||+.+++.+..+..+..+.+
T Consensus 327 v~v~d~~~~~~~~~~~-~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~~~~~~~~~~ 405 (433)
T 3bws_A 327 IEVYDLKEKKVQKSIP-VFDKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEFWEAGNQPTG 405 (433)
T ss_dssp EEEEETTTTEEEEEEE-CSSSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEEEEECSSSEEE
T ss_pred EEEEECCCCcEEEEec-CCCCCCeEEEcCCCCEEEEEecCCCccccccccccccceEEEEEECCCCcEEEEecCCCCCce
Confidence 9999999998887774 778899999999998666665421 167999999999999999988889999
Q ss_pred EEECCCCCeEEEEEecCCCcEEEEECCC
Q 014934 383 LVWSKNVNELVSTHGYSQNQIIVWRYPT 410 (415)
Q Consensus 383 l~~s~~~~~l~s~~g~~dg~I~vw~~~s 410 (415)
++|+|++++|+++ +..|+.|++|++..
T Consensus 406 ~~~s~dg~~l~~~-~~~d~~i~v~~~~~ 432 (433)
T 3bws_A 406 LDVSPDNRYLVIS-DFLDHQIRVYRRDG 432 (433)
T ss_dssp EEECTTSCEEEEE-ETTTTEEEEEEETT
T ss_pred EEEcCCCCEEEEE-ECCCCeEEEEEecC
Confidence 9999999999874 44599999999875
No 122
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.95 E-value=2e-25 Score=217.27 Aligned_cols=226 Identities=14% Similarity=0.096 Sum_probs=188.6
Q ss_pred EEEEE-cCCeEEEEECCCCCeEEeEecCCCCCeEEEEEcCCCCeE-EEEECCCcEEEEECCCCeeeEEecCCCccEEEEE
Q 014934 180 VLAVG-LGNCVYLWNACSSKVTKLCDLGIDDSVCSVGWANRNTHL-AVGTSHGKVQIWDASRCKRVRTMEGHRLRVGALA 257 (415)
Q Consensus 180 ~la~~-~d~~V~iwd~~~~~~~~~~~~~~~~~V~~v~~sp~g~~l-a~g~~dg~V~iwd~~~~~~~~~l~~h~~~V~~l~ 257 (415)
+++++ .++.|++||+.+++....+. . ...+.+++|+|+|++| ++++.++.|++||+.+++.+..+..+. .+.+++
T Consensus 4 l~vs~~~d~~v~v~d~~~~~~~~~~~-~-~~~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~~-~v~~~~ 80 (391)
T 1l0q_A 4 AYIANSESDNISVIDVTSNKVTATIP-V-GSNPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGS-SPQGVA 80 (391)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEEE-C-SSSEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSS-SEEEEE
T ss_pred EEEEcCCCCEEEEEECCCCeEEEEee-c-CCCcceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEECCC-CccceE
Confidence 44555 57999999999998887775 3 3569999999999977 566689999999999999988887655 899999
Q ss_pred ee--CCEE-EEEeCCCcEEEEECCCCCccEEEeccccCCeEEEEEeCCCCEE-EEEeCCCcEEEEECCCCceeEEeccCC
Q 014934 258 WS--SSLL-SSGSRDKSILQRDIRAQEDFVSKLSGHKSEVCGLKWSYDNREL-ASGGNDNRLFVWNQHSTQPVLKYCEHT 333 (415)
Q Consensus 258 ~~--~~~l-~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~spdg~~l-asg~~dg~I~iwd~~~~~~~~~~~~h~ 333 (415)
|+ ++.| ++++.++.|++||+.+++ .+..+.. ...+.+++|+|++++| ++++.|+.|++||+.+++.+..+..|
T Consensus 81 ~spdg~~l~~~~~~~~~v~v~d~~~~~-~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~- 157 (391)
T 1l0q_A 81 VSPDGKQVYVTNMASSTLSVIDTTSNT-VAGTVKT-GKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVG- 157 (391)
T ss_dssp ECTTSSEEEEEETTTTEEEEEETTTTE-EEEEEEC-SSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECC-
T ss_pred ECCCCCEEEEEECCCCEEEEEECCCCe-EEEEEeC-CCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEecC-
Confidence 98 4555 556678999999999876 4555544 4578999999999987 67888999999999999988888655
Q ss_pred CcEEEEEEcCCCCcEEEEEcCCCCCeEEEEECCCCcEEEEeeCCCCEEEEEECCCCCeEEEEEec-CCCcEEEEECCCCc
Q 014934 334 AAVKAIAWSPHLHGLLASGGGTADRCIRFWNTTTNTHLSCMDTGSQVCNLVWSKNVNELVSTHGY-SQNQIIVWRYPTMS 412 (415)
Q Consensus 334 ~~V~~l~~sp~~~~llasggg~~d~~I~iwd~~t~~~~~~~~~~~~V~~l~~s~~~~~l~s~~g~-~dg~I~vw~~~s~~ 412 (415)
..+.+++|+|+++.++++++ .++.|++||+.+++.+..+.+...+.+++|+|++++|+++... .++.|++||+.+++
T Consensus 158 ~~~~~~~~~~dg~~l~~~~~--~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~~~~ 235 (391)
T 1l0q_A 158 RSPKGIAVTPDGTKVYVANF--DSMSISVIDTVTNSVIDTVKVEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNK 235 (391)
T ss_dssp SSEEEEEECTTSSEEEEEET--TTTEEEEEETTTTEEEEEEECSSEEEEEEECTTSSEEEEEEECSSCCEEEEEETTTTE
T ss_pred CCcceEEECCCCCEEEEEeC--CCCEEEEEECCCCeEEEEEecCCCccceEECCCCCEEEEEecCcCCCcEEEEECCCCe
Confidence 46799999999987877776 7899999999999999988888899999999999999885211 68999999998765
Q ss_pred c
Q 014934 413 K 413 (415)
Q Consensus 413 ~ 413 (415)
.
T Consensus 236 ~ 236 (391)
T 1l0q_A 236 I 236 (391)
T ss_dssp E
T ss_pred E
Confidence 4
No 123
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.95 E-value=3e-26 Score=243.20 Aligned_cols=202 Identities=19% Similarity=0.340 Sum_probs=176.2
Q ss_pred CCCCCeEEEEEcCCCCeEEEEECCCcEEEEECC--CCeeeEEecCCCccEEEEEee----CCEEEEEeCCCcEEEEECCC
Q 014934 206 GIDDSVCSVGWANRNTHLAVGTSHGKVQIWDAS--RCKRVRTMEGHRLRVGALAWS----SSLLSSGSRDKSILQRDIRA 279 (415)
Q Consensus 206 ~~~~~V~~v~~sp~g~~la~g~~dg~V~iwd~~--~~~~~~~l~~h~~~V~~l~~~----~~~l~sgs~dg~I~iwd~~~ 279 (415)
+|.+.|++++|+|+|++|++|+.||.|+|||+. +++.+..+.+|...|.+++|+ +++|++|+.||.|++||+++
T Consensus 7 gH~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~~~ 86 (753)
T 3jro_A 7 AHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEEN 86 (753)
T ss_dssp -CCCCEEEECCCSSSCCEEEEETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEEEEEEET
T ss_pred cCcceeEEEEECCCCCeEEEEECCCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEEEEECCC
Confidence 899999999999999999999999999999997 567788899999999999997 57999999999999999988
Q ss_pred CC-ccEEEeccccCCeEEEEEeCC--CCEEEEEeCCCcEEEEECCCC--ceeEEeccCCCcEEEEEEcCC----------
Q 014934 280 QE-DFVSKLSGHKSEVCGLKWSYD--NRELASGGNDNRLFVWNQHST--QPVLKYCEHTAAVKAIAWSPH---------- 344 (415)
Q Consensus 280 ~~-~~~~~~~~h~~~V~~l~~spd--g~~lasg~~dg~I~iwd~~~~--~~~~~~~~h~~~V~~l~~sp~---------- 344 (415)
+. .....+.+|...|.+++|+|+ +++|++|+.||.|++||++++ .....+.+|...|.+++|+|.
T Consensus 87 ~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~~~~~~~~~~ 166 (753)
T 3jro_A 87 GRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNG 166 (753)
T ss_dssp TEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEECCSSCEEEEEECCCC---------
T ss_pred CcccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEeecCCCceEEEEecCccccccccccc
Confidence 74 245677889999999999999 999999999999999999877 345567789999999999994
Q ss_pred ---CCcEEEEEcCCCCCeEEEEECCCCc----EEEEee-CCCCEEEEEECCC---CCeEEEEEecCCCcEEEEECCCCc
Q 014934 345 ---LHGLLASGGGTADRCIRFWNTTTNT----HLSCMD-TGSQVCNLVWSKN---VNELVSTHGYSQNQIIVWRYPTMS 412 (415)
Q Consensus 345 ---~~~llasggg~~d~~I~iwd~~t~~----~~~~~~-~~~~V~~l~~s~~---~~~l~s~~g~~dg~I~vw~~~s~~ 412 (415)
+. ++++++ .||.|++||++++. .+..+. |...|.+++|+|+ +..|++ |+.||.|++||+.+.+
T Consensus 167 ~~d~~-~l~sgs--~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s--~s~Dg~I~iwd~~~~~ 240 (753)
T 3jro_A 167 TKESR-KFVTGG--ADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLAS--VSQDRTCIIWTQDNEQ 240 (753)
T ss_dssp CGGGC-CEEEEE--TTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEE--EESSSCEEEEEESSSS
T ss_pred CCCCC-EEEEEE--CCCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCCEEEE--EecCCEEEEecCCCCC
Confidence 55 666666 79999999998874 334443 6788999999999 888888 7789999999998753
No 124
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.95 E-value=7.6e-26 Score=227.04 Aligned_cols=218 Identities=10% Similarity=0.131 Sum_probs=173.5
Q ss_pred CcceeEeecCC-CcEEEEE-cCCeEEEEECCCCCeEEeEecCCCC-----CeEEEEEcCCCCeEEEEECCCcEEEEECCC
Q 014934 167 DFYLNLVDWSS-HNVLAVG-LGNCVYLWNACSSKVTKLCDLGIDD-----SVCSVGWANRNTHLAVGTSHGKVQIWDASR 239 (415)
Q Consensus 167 ~~~i~~l~ws~-~~~la~~-~d~~V~iwd~~~~~~~~~~~~~~~~-----~V~~v~~sp~g~~la~g~~dg~V~iwd~~~ 239 (415)
.-+|.+++||| +..||++ .++.|++|+..+ +...+ .|.. .|.+++|+|||++||+|+.||+|+|||+.+
T Consensus 85 ~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~--~l~~l--~~~~~~~~~sv~svafSPDG~~LAsgs~DGtVkIWd~~~ 160 (588)
T 2j04_A 85 VCYPRVCKPSPIDDWMAVLSNNGNVSVFKDNK--MLTNL--DSKGNLSSRTYHCFEWNPIESSIVVGNEDGELQFFSIRK 160 (588)
T ss_dssp SCCEEEEEECSSSSCEEEEETTSCEEEEETTE--EEEEC--CCSSCSTTTCEEEEEECSSSSCEEEEETTSEEEEEECCC
T ss_pred CCcEEEEEECCCCCEEEEEeCCCcEEEEeCCc--eeeec--cCCCccccccEEEEEEcCCCCEEEEEcCCCEEEEEECCC
Confidence 45799999999 7777776 689999999644 33333 3433 599999999999999999999999999988
Q ss_pred Ce-------eeEEe----cCCCccEEEEEeeCCEEEEEeCCCcEEEEECCCCCc--cEEEe-ccccCCeEEEEEeCCCCE
Q 014934 240 CK-------RVRTM----EGHRLRVGALAWSSSLLSSGSRDKSILQRDIRAQED--FVSKL-SGHKSEVCGLKWSYDNRE 305 (415)
Q Consensus 240 ~~-------~~~~l----~~h~~~V~~l~~~~~~l~sgs~dg~I~iwd~~~~~~--~~~~~-~~h~~~V~~l~~spdg~~ 305 (415)
++ .+.++ .+|...|.+++|+|+-+++++.|++|++||+..... ....+ .+|...|.+++|+ |+.
T Consensus 161 ~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdgLaass~D~tVrlWd~~~~~~~~~~~tL~~~h~~~V~svaFs--g~~ 238 (588)
T 2j04_A 161 NSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDVLVAALSNNSVFSMTVSASSHQPVSRMIQNASRRKITDLKIV--DYK 238 (588)
T ss_dssp CTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTEEEEEETTCCEEEECCCSSSSCCCEEEEECCCSSCCCCEEEE--TTE
T ss_pred CccccccceeeeeeecccccccccEEEEEEcCCcEEEEeCCCeEEEEECCCCccccceeeecccccCcEEEEEEE--CCE
Confidence 75 35666 678889999999965599999999999999987763 23455 4788999999999 689
Q ss_pred EEEEeCCCcEEEEECCCCceeEEeccCCCcEEEEEE--cCCCCcEEEEEcCCCCCeEEEEECCC----------------
Q 014934 306 LASGGNDNRLFVWNQHSTQPVLKYCEHTAAVKAIAW--SPHLHGLLASGGGTADRCIRFWNTTT---------------- 367 (415)
Q Consensus 306 lasg~~dg~I~iwd~~~~~~~~~~~~h~~~V~~l~~--sp~~~~llasggg~~d~~I~iwd~~t---------------- 367 (415)
||+++ ++.|++||+.+++......+|.+.|..++| +|++. .+++++ +||+ ++|....
T Consensus 239 LASa~-~~tIkLWd~~~~~~~~~~~gh~~~V~~va~~~s~d~~-~La~a~--edG~-klw~~d~~~~spd~~l~a~~d~~ 313 (588)
T 2j04_A 239 VVLTC-PGYVHKIDLKNYSISSLKTGSLENFHIIPLNHEKEST-ILLMSN--KTSY-KVLLEDELHVTADNIIAPYLEKK 313 (588)
T ss_dssp EEEEC-SSEEEEEETTTTEEEEEECSCCSCCCEEEETTCSSCE-EEEECS--SCEE-EEEESSSEEEECCCSSHHHHHHH
T ss_pred EEEEe-CCeEEEEECCCCeEEEEEcCCCceEEEEEeeeCCCCC-EEEEEc--CCCC-EEEeeccEEECCCceEEEEcCCE
Confidence 99997 699999999988774333389999999999 99986 667765 7999 9998741
Q ss_pred -------CcEEEEeeCCCCEEEEEECCCCCeEEEE
Q 014934 368 -------NTHLSCMDTGSQVCNLVWSKNVNELVST 395 (415)
Q Consensus 368 -------~~~~~~~~~~~~V~~l~~s~~~~~l~s~ 395 (415)
+..+..+++...|.+++|+|||+.+|++
T Consensus 314 v~lW~~~g~~l~~~~~~~~I~~va~SPdG~~lA~~ 348 (588)
T 2j04_A 314 FKKWSTIWNEFNNYETTLVIHGISLSPDGYSIAIV 348 (588)
T ss_dssp HHHTTTTTTSSSSSCCEEEEEEEEECTTSSEEEEE
T ss_pred EEEEECCCCceeeeccceEEEEEEECCCCCEEEEE
Confidence 1111122222348999999999999984
No 125
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.94 E-value=4.6e-25 Score=216.28 Aligned_cols=240 Identities=10% Similarity=0.116 Sum_probs=165.5
Q ss_pred eeEeecC---C--CcEEEEEcCCeEEEEECCCCC--------eEEeEecCCCCCeEEEEEc-------------------
Q 014934 170 LNLVDWS---S--HNVLAVGLGNCVYLWNACSSK--------VTKLCDLGIDDSVCSVGWA------------------- 217 (415)
Q Consensus 170 i~~l~ws---~--~~~la~~~d~~V~iwd~~~~~--------~~~~~~~~~~~~V~~v~~s------------------- 217 (415)
..++.|. + .+++++|.++.|.+|+..... ...+....+...+..+.|+
T Consensus 18 p~~~~w~~~~~~~~~l~a~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (393)
T 4gq1_A 18 PYTTTWCSQSPSCSNLLAIGHDTGITIYCASEEQTPGSTGLTLQELFTIQTGLPTLHLSFSSSCSYSENLHDGDGNVNSS 97 (393)
T ss_dssp EEEEEECTTSGGGTTEEEEEESSEEEEEEEEECCSSSCCSEEEEEEEEEECSSCEEEEEECTTCEEECC----------C
T ss_pred CeEEEEeCCCCCCCCEEEEECCCCEEEEECCCCCcccccccceeeeEEEecCCCeeeEeecCCccccccccCCCcceeec
Confidence 3455563 3 579999999999999753211 1112222334455555544
Q ss_pred -CCCCeEEEEECCCcEEEEECCCCeee-----EEecCCCccEEEEEeeC----------CEEEEEeCCCcEEEEECCCCC
Q 014934 218 -NRNTHLAVGTSHGKVQIWDASRCKRV-----RTMEGHRLRVGALAWSS----------SLLSSGSRDKSILQRDIRAQE 281 (415)
Q Consensus 218 -p~g~~la~g~~dg~V~iwd~~~~~~~-----~~l~~h~~~V~~l~~~~----------~~l~sgs~dg~I~iwd~~~~~ 281 (415)
+++.+||+|+.|++|+|||+.+++.. ..+.+|.+.|.+++|++ ++|++|+.|++|++||++...
T Consensus 98 ~~~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~~ 177 (393)
T 4gq1_A 98 PVYSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDEG 177 (393)
T ss_dssp CEEEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETTE
T ss_pred CCCCCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCCc
Confidence 35568999999999999999887643 33679999999999963 699999999999999998876
Q ss_pred ccEEEeccccCCeEEEEEeCCCC-EEEEEeCCCcEEEEECCCCceeEE-------------------------eccCCCc
Q 014934 282 DFVSKLSGHKSEVCGLKWSYDNR-ELASGGNDNRLFVWNQHSTQPVLK-------------------------YCEHTAA 335 (415)
Q Consensus 282 ~~~~~~~~h~~~V~~l~~spdg~-~lasg~~dg~I~iwd~~~~~~~~~-------------------------~~~h~~~ 335 (415)
....+.+|...|.+++|+|++. +|++|+.|+.|++||+++++.... ..+|...
T Consensus 178 -~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~ 256 (393)
T 4gq1_A 178 -PILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIASS 256 (393)
T ss_dssp -EEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC------CCSSS
T ss_pred -eeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEecccccceeeeeccccccc
Confidence 4566778889999999999874 799999999999999987654322 2357788
Q ss_pred EEEEEEc-CCCCcEEEEEcCCCCCeEEEEECCCCcEEEEee-CCCCE------------------EEEEECC-CCCeEEE
Q 014934 336 VKAIAWS-PHLHGLLASGGGTADRCIRFWNTTTNTHLSCMD-TGSQV------------------CNLVWSK-NVNELVS 394 (415)
Q Consensus 336 V~~l~~s-p~~~~llasggg~~d~~I~iwd~~t~~~~~~~~-~~~~V------------------~~l~~s~-~~~~l~s 394 (415)
|.+++|+ |++. .+++++ .|+.+++||+.+++....+. +...+ ....|++ .+..+++
T Consensus 257 v~~v~~~~~dg~-~l~s~s--~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (393)
T 4gq1_A 257 LANVRWIGSDGS-GILAMC--KSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGISLFPSLLGACPHPRYMDYFAT 333 (393)
T ss_dssp CSEEEEETTTTC-EEEEEC--TTSEEEEEEC-------------------CCSCSEEEECSSCCSSCCEECSSCTTEEEE
T ss_pred ceeeeeecCCCC-EEEEEe--CCCCEEEEECccCCCCceEeeecCccccEEEccccccccccCcceeEEEccCCCCEEEE
Confidence 8999987 6776 666766 89999999998876554432 11111 2223333 3444444
Q ss_pred EEecCCCcEEEEECCCCccc
Q 014934 395 THGYSQNQIIVWRYPTMSKV 414 (415)
Q Consensus 395 ~~g~~dg~I~vw~~~s~~~l 414 (415)
+ |+.||.|++||+.+++.+
T Consensus 334 s-gs~Dg~V~lwd~~~~~~~ 352 (393)
T 4gq1_A 334 A-HSQHGLIQLINTYEKDSN 352 (393)
T ss_dssp E-ETTTTEEEEEETTCTTCC
T ss_pred E-ECCCCEEEEEECCCCcEE
Confidence 3 889999999999887653
No 126
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.92 E-value=1.9e-23 Score=197.73 Aligned_cols=182 Identities=13% Similarity=0.049 Sum_probs=141.1
Q ss_pred CCcEEEEEc---CCeEEEEEC-CCCCeEEeEecCCCCCeEEEEEcC---CCCeEEEEECCCcEEEEECCCCeeeEEecCC
Q 014934 177 SHNVLAVGL---GNCVYLWNA-CSSKVTKLCDLGIDDSVCSVGWAN---RNTHLAVGTSHGKVQIWDASRCKRVRTMEGH 249 (415)
Q Consensus 177 ~~~~la~~~---d~~V~iwd~-~~~~~~~~~~~~~~~~V~~v~~sp---~g~~la~g~~dg~V~iwd~~~~~~~~~l~~h 249 (415)
.++++.++. ++.|++|++ .+++...... .|...++.++|++ ++.+||+|+.|++|+|||+.++++++++.+|
T Consensus 144 ~g~lv~ss~~g~d~~V~~~~~s~dG~~~~s~~-~~~~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~ 222 (356)
T 2w18_A 144 KRRLVSSSGTLSDQQVEVMTFAEDGGGKENQF-LMPPEETILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQLLKKMHID 222 (356)
T ss_dssp TTEEEEEESSSTTCEEEEEEECTTSCEEEEEE-ECCCSSCEEEEEEEETSTTEEEEEETTSEEEEEETTTCCEEEEEECC
T ss_pred CCcEEEecccCCCCcEEEEEECCCCceeeeec-cCCCceeeEEeeccCCCCceEEEecCCCcEEEEECCCCcEEEEEcCC
Confidence 356666654 789999998 4476665554 6778888888888 7799999999999999999999999999865
Q ss_pred C---ccEEEEEeeC--CE------------EEEEeCCCcEEEEECCCCCccEEEe-----ccccCCeEEEEEeCCCCEEE
Q 014934 250 R---LRVGALAWSS--SL------------LSSGSRDKSILQRDIRAQEDFVSKL-----SGHKSEVCGLKWSYDNRELA 307 (415)
Q Consensus 250 ~---~~V~~l~~~~--~~------------l~sgs~dg~I~iwd~~~~~~~~~~~-----~~h~~~V~~l~~spdg~~la 307 (415)
. ..+.+++|++ .+ +++|+.|++|++||..++. .+..+ .+|...+.+..++ +.++|
T Consensus 223 ~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk-~l~v~~~~~p~Gh~~~~lsg~~s--g~~lA 299 (356)
T 2w18_A 223 DSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKTTL-SVGVMLYCLPPGQAGRFLEGDVK--DHCAA 299 (356)
T ss_dssp C---CCCEEEEEEETTEEEEEEC------------CCEEEEEEETTTTE-EEEEEEECCCTTCCCCEEEEEEE--TTEEE
T ss_pred CcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEECCCCE-EEEEEEeeccCCCcceeEccccC--CCEEE
Confidence 4 3566777873 33 3678999999999998876 33333 4676665544444 88999
Q ss_pred EEeCCCcEEEEECCCCceeEEeccCCCcEE-EEEEcCCCCcEEEEEcCCCCCeEEEEEC
Q 014934 308 SGGNDNRLFVWNQHSTQPVLKYCEHTAAVK-AIAWSPHLHGLLASGGGTADRCIRFWNT 365 (415)
Q Consensus 308 sg~~dg~I~iwd~~~~~~~~~~~~h~~~V~-~l~~sp~~~~llasggg~~d~~I~iwd~ 365 (415)
+|+.|++|+|||+.+++.+.++.+|...+. .++|+|+|+ +|++|+ .|++|++||+
T Consensus 300 SgS~DgTIkIWDl~tGk~l~tL~gH~~~vvs~vafSPDG~-~LaSGS--~D~TIklWd~ 355 (356)
T 2w18_A 300 AILTSGTIAIWDLLLGQCTALLPPVSDQHWSFVKWSGTDS-HLLAGQ--KDGNIFVYHY 355 (356)
T ss_dssp EEETTSCEEEEETTTCSEEEEECCC--CCCCEEEECSSSS-EEEEEC--TTSCEEEEEE
T ss_pred EEcCCCcEEEEECCCCcEEEEecCCCCCeEEEEEECCCCC-EEEEEE--CCCcEEEecC
Confidence 999999999999999999999999987665 589999997 777877 8999999985
No 127
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.92 E-value=2e-22 Score=199.16 Aligned_cols=216 Identities=13% Similarity=0.073 Sum_probs=172.5
Q ss_pred CeEEEEECCCCCeEEeEecCCCCCeEEEEEcCCCCeEEEEECCC---cEEEEECCCCeeeEEecCCCccEEEEEeeC--C
Q 014934 187 NCVYLWNACSSKVTKLCDLGIDDSVCSVGWANRNTHLAVGTSHG---KVQIWDASRCKRVRTMEGHRLRVGALAWSS--S 261 (415)
Q Consensus 187 ~~V~iwd~~~~~~~~~~~~~~~~~V~~v~~sp~g~~la~g~~dg---~V~iwd~~~~~~~~~l~~h~~~V~~l~~~~--~ 261 (415)
+.|++||...+....+. +|...|.+++|+|+|++||+++.++ .|++||+.+++.. .+..|...+.+++|++ +
T Consensus 159 ~~i~i~d~~g~~~~~l~--~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~-~l~~~~~~~~~~~~spdg~ 235 (415)
T 2hqs_A 159 YELRVSDYDGYNQFVVH--RSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVR-QVASFPRHNGAPAFSPDGS 235 (415)
T ss_dssp EEEEEEETTSCSCEEEE--EESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEE-EEECCSSCEEEEEECTTSS
T ss_pred ceEEEEcCCCCCCEEEe--CCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEE-EeecCCCcccCEEEcCCCC
Confidence 68999999866654443 5778999999999999999999875 8999999988765 4667888999999994 5
Q ss_pred EEE-EEeCCCc--EEEEECCCCCccEEEeccccCCeEEEEEeCCCCEEEEEeCC-C--cEEEEECCCCceeEEeccCCCc
Q 014934 262 LLS-SGSRDKS--ILQRDIRAQEDFVSKLSGHKSEVCGLKWSYDNRELASGGND-N--RLFVWNQHSTQPVLKYCEHTAA 335 (415)
Q Consensus 262 ~l~-sgs~dg~--I~iwd~~~~~~~~~~~~~h~~~V~~l~~spdg~~lasg~~d-g--~I~iwd~~~~~~~~~~~~h~~~ 335 (415)
.|+ +++.++. |++||+.++. ...+..|...+.+++|+|||++|++++.+ + .|++||+.+++. ..+..|...
T Consensus 236 ~la~~~~~~g~~~i~~~d~~~~~--~~~l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~~-~~l~~~~~~ 312 (415)
T 2hqs_A 236 KLAFALSKTGSLNLYVMDLASGQ--IRQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAP-QRITWEGSQ 312 (415)
T ss_dssp EEEEEECTTSSCEEEEEETTTCC--EEECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCC-EECCCSSSE
T ss_pred EEEEEEecCCCceEEEEECCCCC--EEeCcCCCCcccceEECCCCCEEEEEECCCCCcEEEEEECCCCCE-EEEecCCCc
Confidence 566 7777665 9999998876 46777888999999999999999988864 4 688889988764 455667788
Q ss_pred EEEEEEcCCCCcEEEEEcCCCCCeEEEEECCCCcEEEEeeCCCCEEEEEECCCCCeEEEEEecCCC---cEEEEECCCC
Q 014934 336 VKAIAWSPHLHGLLASGGGTADRCIRFWNTTTNTHLSCMDTGSQVCNLVWSKNVNELVSTHGYSQN---QIIVWRYPTM 411 (415)
Q Consensus 336 V~~l~~sp~~~~llasggg~~d~~I~iwd~~t~~~~~~~~~~~~V~~l~~s~~~~~l~s~~g~~dg---~I~vw~~~s~ 411 (415)
+..++|+|+|+.|++++....+..|++||+.+++... +.....+..++|+|+|+.|+++ +.++ .|++|++...
T Consensus 313 ~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~~~-l~~~~~~~~~~~spdg~~l~~~--s~~~~~~~l~~~d~~g~ 388 (415)
T 2hqs_A 313 NQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQV-LSSTFLDETPSLAPNGTMVIYS--SSQGMGSVLNLVSTDGR 388 (415)
T ss_dssp EEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCEEE-CCCSSSCEEEEECTTSSEEEEE--EEETTEEEEEEEETTSC
T ss_pred ccCeEECCCCCEEEEEECcCCceEEEEEECCCCCEEE-ecCCCCcCCeEEcCCCCEEEEE--EcCCCccEEEEEECCCC
Confidence 9999999999966665541113689999999988754 4333489999999999999884 3344 7999998754
No 128
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.91 E-value=1.5e-21 Score=186.47 Aligned_cols=238 Identities=12% Similarity=0.080 Sum_probs=192.2
Q ss_pred ceeEeecCC-CcEEEEEc--------CCeEEEEECCCCCeEEeEecCCCCCeEEEEEcCCCCeEEEEE-CCCcEEEEECC
Q 014934 169 YLNLVDWSS-HNVLAVGL--------GNCVYLWNACSSKVTKLCDLGIDDSVCSVGWANRNTHLAVGT-SHGKVQIWDAS 238 (415)
Q Consensus 169 ~i~~l~ws~-~~~la~~~--------d~~V~iwd~~~~~~~~~~~~~~~~~V~~v~~sp~g~~la~g~-~dg~V~iwd~~ 238 (415)
.+..++|++ ++.|+++. ++.|++||..+++....+..+ ..+.+++|+|+|++++++. .++.|.+||..
T Consensus 42 ~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~--~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~ 119 (353)
T 3vgz_A 42 GAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHND--LKPFGATINNTTQTLWFGNTVNSAVTAIDAK 119 (353)
T ss_dssp SEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEES--SCCCSEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred CccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEecC--CCcceEEECCCCCEEEEEecCCCEEEEEeCC
Confidence 366889999 56666664 568999999999988877643 4578899999999666554 47899999999
Q ss_pred CCeeeEEecCCCc---------cEEEEEee--CCEEEEEe--CCCcEEEEECCCCCccEEEeccccCCeEEEEEeCCCCE
Q 014934 239 RCKRVRTMEGHRL---------RVGALAWS--SSLLSSGS--RDKSILQRDIRAQEDFVSKLSGHKSEVCGLKWSYDNRE 305 (415)
Q Consensus 239 ~~~~~~~l~~h~~---------~V~~l~~~--~~~l~sgs--~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~spdg~~ 305 (415)
+++.+..+..+.. .+.+++|+ ++.+++++ .++.|.+||..+.+ ....+..+...+.+++|+|+|++
T Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~-~~~~~~~~~~~~~~~~~s~dg~~ 198 (353)
T 3vgz_A 120 TGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIK-LKTAIQNTGKMSTGLALDSEGKR 198 (353)
T ss_dssp TCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTE-EEEEECCCCTTCCCCEEETTTTE
T ss_pred CCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCc-eEEEecCCCCccceEEECCCCCE
Confidence 9998887765432 27889998 46666655 57889999998876 45566556667889999999999
Q ss_pred EEEEeCCCcEEEEECCCCceeEEecc----CCCcEEEEEEcCCCCcEEEEEcCCCCCeEEEEECCCCcEEEEeeCCCCEE
Q 014934 306 LASGGNDNRLFVWNQHSTQPVLKYCE----HTAAVKAIAWSPHLHGLLASGGGTADRCIRFWNTTTNTHLSCMDTGSQVC 381 (415)
Q Consensus 306 lasg~~dg~I~iwd~~~~~~~~~~~~----h~~~V~~l~~sp~~~~llasggg~~d~~I~iwd~~t~~~~~~~~~~~~V~ 381 (415)
|++++.++.|.+||+.+++.+..+.. +...+..++|+|+++.++++.. .++.|.+||+.+++.+..+..+.. .
T Consensus 199 l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~--~~~~v~~~d~~~~~~~~~~~~~~~-~ 275 (353)
T 3vgz_A 199 LYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDS--KAAEVLVVDTRNGNILAKVAAPES-L 275 (353)
T ss_dssp EEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEES--SSSEEEEEETTTCCEEEEEECSSC-C
T ss_pred EEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeC--CCCEEEEEECCCCcEEEEEEcCCC-c
Confidence 99999999999999999988877754 5567889999999998877775 679999999999999888876554 5
Q ss_pred EEEECCCCCeEEEEEecCCCcEEEEECCCCcc
Q 014934 382 NLVWSKNVNELVSTHGYSQNQIIVWRYPTMSK 413 (415)
Q Consensus 382 ~l~~s~~~~~l~s~~g~~dg~I~vw~~~s~~~ 413 (415)
.++|+|++++++++ +..++.|.+||..+++.
T Consensus 276 ~~~~s~dg~~l~v~-~~~~~~v~~~d~~~~~~ 306 (353)
T 3vgz_A 276 AVLFNPARNEAYVT-HRQAGKVSVIDAKSYKV 306 (353)
T ss_dssp CEEEETTTTEEEEE-ETTTTEEEEEETTTTEE
T ss_pred eEEECCCCCEEEEE-ECCCCeEEEEECCCCeE
Confidence 69999999977765 45789999999988754
No 129
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.90 E-value=1.2e-22 Score=201.93 Aligned_cols=237 Identities=11% Similarity=0.098 Sum_probs=170.9
Q ss_pred CcceeEeecCC-CcEEEEEcCCeEEEEECCCC-----------CeEE---eEecCCCCCeEEEEEcCCCCeEE----EEE
Q 014934 167 DFYLNLVDWSS-HNVLAVGLGNCVYLWNACSS-----------KVTK---LCDLGIDDSVCSVGWANRNTHLA----VGT 227 (415)
Q Consensus 167 ~~~i~~l~ws~-~~~la~~~d~~V~iwd~~~~-----------~~~~---~~~~~~~~~V~~v~~sp~g~~la----~g~ 227 (415)
...+++++|++ +.+|+++..+.|++|+...- .... ...+.+...|++++|+|+|++|| +|+
T Consensus 36 ~~~~n~lavs~~~~~l~~~~~dgv~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~lav~~~sgs 115 (434)
T 2oit_A 36 KERSSLLAVSNKYGLVFAGGASGLQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIHHLALSCDNLTLSACMMSSE 115 (434)
T ss_dssp CSCCBCEEEETTTTEEEEEETTEEEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSCEEEEEECTTSCEEEEEEEETT
T ss_pred CCCccEEEEecCCCEEEEECCCEEEEEEchHhhhhcccccCcccccccCccccccCCCcccEEEEcCCCCEEEEEEeccC
Confidence 34689999999 77888886666999874311 1110 11124567899999999999999 678
Q ss_pred CCCcEEEEECCCC--------e---eeEEecCCCccEEEEEeeC---CEEEEEeCCCcEEEEECCCCCccEEEeccccCC
Q 014934 228 SHGKVQIWDASRC--------K---RVRTMEGHRLRVGALAWSS---SLLSSGSRDKSILQRDIRAQEDFVSKLSGHKSE 293 (415)
Q Consensus 228 ~dg~V~iwd~~~~--------~---~~~~l~~h~~~V~~l~~~~---~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~ 293 (415)
.|+.|+|||+.++ + .+..+.+|...|.+++|++ ++|++++.||+|++||+++.. ......+|...
T Consensus 116 ~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~~-~~~~~~~~~~~ 194 (434)
T 2oit_A 116 YGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTETV-KVCATLPSTVA 194 (434)
T ss_dssp TEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEESSSE-EEEEEECGGGC
T ss_pred CCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEEEEEcCCCc-ceeeccCCCCc
Confidence 8999999998654 2 2455678999999999984 589999999999999999885 45556678999
Q ss_pred eEEEEEeCCCCEEEEEeCCCcEEEEECCCCceeEEeccC-------CCcEEEEEEcCCCCcEEEEEcCCCC------CeE
Q 014934 294 VCGLKWSYDNRELASGGNDNRLFVWNQHSTQPVLKYCEH-------TAAVKAIAWSPHLHGLLASGGGTAD------RCI 360 (415)
Q Consensus 294 V~~l~~spdg~~lasg~~dg~I~iwd~~~~~~~~~~~~h-------~~~V~~l~~sp~~~~llasggg~~d------~~I 360 (415)
|++++|+|+|++||+|+.||.|++||++ ++....+..| ...|.+++|++++..+++... .| ..+
T Consensus 195 v~~v~wspdg~~lasgs~dg~v~iwd~~-~~~~~~~~~~~~~~~~~~~~v~~v~w~~~~~~l~~~~~--~dg~~~~~~~v 271 (434)
T 2oit_A 195 VTSVCWSPKGKQLAVGKQNGTVVQYLPT-LQEKKVIPCPPFYESDHPVRVLDVLWIGTYVFAIVYAA--ADGTLETSPDV 271 (434)
T ss_dssp EEEEEECTTSSCEEEEETTSCEEEECTT-CCEEEEECCCTTCCTTSCEEEEEEEEEETTEEEEEEEE--TTCCSSSCCEE
T ss_pred eeEEEEcCCCCEEEEEcCCCcEEEEccC-CcccccccCCcccCCCCceeEEEEEEecCceEEEEEcc--CCCccCCCCce
Confidence 9999999999999999999999999998 5555555443 338999999998765544443 23 249
Q ss_pred EEEECCCCc-----EEEEe-eC-----C--CCEEEEEECCCCCeEEEEEecCCCcEEEEEC
Q 014934 361 RFWNTTTNT-----HLSCM-DT-----G--SQVCNLVWSKNVNELVSTHGYSQNQIIVWRY 408 (415)
Q Consensus 361 ~iwd~~t~~-----~~~~~-~~-----~--~~V~~l~~s~~~~~l~s~~g~~dg~I~vw~~ 408 (415)
++|++...+ ....+ +. . .+-..+.+-++.+.+++++ ...+.|.|...
T Consensus 272 ~i~~l~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~l~dw~l~~v~s-~~s~dv~vl~~ 331 (434)
T 2oit_A 272 VMALLPKKEEKHPEIFVNFMEPCYGSCTERQHHYYLSYIEEWDLVLAAS-AASTEVSILAR 331 (434)
T ss_dssp EEEECCCTTTCCCCEEEECCCSSCCCCSSSCCCEEEEEEGGGTEEEEEE-TTCSBCEEEEE
T ss_pred EEEEeccCCCCCCcceEecccCCCCCCCCcCcceeeehhccCCEEEEec-CCCCceeEEEe
Confidence 999998652 11221 11 1 1222344447777777753 44555666654
No 130
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.90 E-value=1.3e-22 Score=200.45 Aligned_cols=237 Identities=15% Similarity=0.112 Sum_probs=182.8
Q ss_pred ceeEeecCC--CcEEEEEc-----CC----eEEEEEC--CCCCeEEe--EecCCCCCeEEEEEcC--------------C
Q 014934 169 YLNLVDWSS--HNVLAVGL-----GN----CVYLWNA--CSSKVTKL--CDLGIDDSVCSVGWAN--------------R 219 (415)
Q Consensus 169 ~i~~l~ws~--~~~la~~~-----d~----~V~iwd~--~~~~~~~~--~~~~~~~~V~~v~~sp--------------~ 219 (415)
.++..+|++ ..++++|. +| .|+|||+ .+++.... +. +|...+..+++++ .
T Consensus 64 ~~~~~~w~~~g~~~~~~g~~~~~~~G~~~~~i~lwd~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~d~~~~~~~g~~~~~ 142 (415)
T 2hqs_A 64 EVQPAAWSALGIDAVVVGQVTPNPDGSYNVAYQLVDTGGAPGTVLAQNSYK-VNKQWLRYAGHTASDEVFEKLTGIKGAF 142 (415)
T ss_dssp GCCHHHHHTTTCCEEEEEEEEECTTSCEEEEEEEEECSSSTTCEEEEEEEE-ECGGGHHHHHHHHHHHHHHHHHSSCCCT
T ss_pred CcCHHHHHhcCCCEEEEEEEEECCCCeEEEEEEEEeCCCCCCCEEeeeEEE-cChhHHHHHHHHHHHHHHHHHcCCCCcC
Confidence 466778988 34665552 56 8999999 88886532 33 6666777777664 2
Q ss_pred CCeEEEEECC------CcEEEEECCCCeeeEEecCCCccEEEEEee--CCEEEEEeCCC---cEEEEECCCCCccEEEec
Q 014934 220 NTHLAVGTSH------GKVQIWDASRCKRVRTMEGHRLRVGALAWS--SSLLSSGSRDK---SILQRDIRAQEDFVSKLS 288 (415)
Q Consensus 220 g~~la~g~~d------g~V~iwd~~~~~~~~~l~~h~~~V~~l~~~--~~~l~sgs~dg---~I~iwd~~~~~~~~~~~~ 288 (415)
+..++.++.+ +.|++||+. +.....+.+|...|.+++|+ ++.|++++.++ .|++||+.+++ ...+.
T Consensus 143 ~~~l~~~s~~~~~~~~~~i~i~d~~-g~~~~~l~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~--~~~l~ 219 (415)
T 2hqs_A 143 RTRIAYVVQTNGGQFPYELRVSDYD-GYNQFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGA--VRQVA 219 (415)
T ss_dssp TCEEEEEEECSSSSCCEEEEEEETT-SCSCEEEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCC--EEEEE
T ss_pred CCEEEEEEecCCCCccceEEEEcCC-CCCCEEEeCCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCc--EEEee
Confidence 6667766654 799999997 45567778899999999999 47899998885 99999999876 34567
Q ss_pred cccCCeEEEEEeCCCCEEE-EEeCCCc--EEEEECCCCceeEEeccCCCcEEEEEEcCCCCcEEEEEcCCCCC--eEEEE
Q 014934 289 GHKSEVCGLKWSYDNRELA-SGGNDNR--LFVWNQHSTQPVLKYCEHTAAVKAIAWSPHLHGLLASGGGTADR--CIRFW 363 (415)
Q Consensus 289 ~h~~~V~~l~~spdg~~la-sg~~dg~--I~iwd~~~~~~~~~~~~h~~~V~~l~~sp~~~~llasggg~~d~--~I~iw 363 (415)
.|...+.+++|+|||++|| +++.|+. |++||+.+++. ..+..|...+.+++|+|+|+.+++++. .++ .|.+|
T Consensus 220 ~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~spdg~~l~~~s~--~~g~~~i~~~ 296 (415)
T 2hqs_A 220 SFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQI-RQVTDGRSNNTEPTWFPDSQNLAFTSD--QAGRPQVYKV 296 (415)
T ss_dssp CCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCE-EECCCCSSCEEEEEECTTSSEEEEEEC--TTSSCEEEEE
T ss_pred cCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCE-EeCcCCCCcccceEECCCCCEEEEEEC--CCCCcEEEEE
Confidence 7888999999999999888 6666554 99999998865 567788899999999999986766654 344 78888
Q ss_pred ECCCCcEEEEeeCCCCEEEEEECCCCCeEEEEEec-CCCcEEEEECCCCc
Q 014934 364 NTTTNTHLSCMDTGSQVCNLVWSKNVNELVSTHGY-SQNQIIVWRYPTMS 412 (415)
Q Consensus 364 d~~t~~~~~~~~~~~~V~~l~~s~~~~~l~s~~g~-~dg~I~vw~~~s~~ 412 (415)
|+.+++......++..+..++|+|+|++|+++... .+..|.+||+.+.+
T Consensus 297 d~~~~~~~~l~~~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~ 346 (415)
T 2hqs_A 297 NINGGAPQRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGG 346 (415)
T ss_dssp ETTSSCCEECCCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCC
T ss_pred ECCCCCEEEEecCCCcccCeEECCCCCEEEEEECcCCceEEEEEECCCCC
Confidence 99988765444466788999999999999985321 13589999998764
No 131
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.90 E-value=6e-22 Score=183.41 Aligned_cols=227 Identities=13% Similarity=0.127 Sum_probs=174.3
Q ss_pred cceeEeecCC-CcEEEEEcCCeEEEEECCC-CCeEEeEecCCCCCeEEEEEcCCCCeEEEEE--CCCcEEEEEC--CCCe
Q 014934 168 FYLNLVDWSS-HNVLAVGLGNCVYLWNACS-SKVTKLCDLGIDDSVCSVGWANRNTHLAVGT--SHGKVQIWDA--SRCK 241 (415)
Q Consensus 168 ~~i~~l~ws~-~~~la~~~d~~V~iwd~~~-~~~~~~~~~~~~~~V~~v~~sp~g~~la~g~--~dg~V~iwd~--~~~~ 241 (415)
..+.+++|+| ++.|+++.++.|++||+.+ ++...+....+...+.+++|+|+|++|++++ .++.+.||.+ .+++
T Consensus 42 ~~v~~~~~spdg~~l~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~ 121 (297)
T 2ojh_A 42 ELFEAPNWSPDGKYLLLNSEGLLYRLSLAGDPSPEKVDTGFATICNNDHGISPDGALYAISDKVEFGKSAIYLLPSTGGT 121 (297)
T ss_dssp SCCEEEEECTTSSEEEEEETTEEEEEESSSCCSCEECCCTTCCCBCSCCEECTTSSEEEEEECTTTSSCEEEEEETTCCC
T ss_pred cceEeeEECCCCCEEEEEcCCeEEEEeCCCCCCceEeccccccccccceEECCCCCEEEEEEeCCCCcceEEEEECCCCc
Confidence 3578999999 8889998899999999999 8877666433357889999999999999998 3345555554 4444
Q ss_pred eeEEecCCCccEEEEEee--CCEEE-EEeCCCcEEEEECCCCCccEEEeccccCCeEEEEEeCCCCEEEEEe-CCCcEEE
Q 014934 242 RVRTMEGHRLRVGALAWS--SSLLS-SGSRDKSILQRDIRAQEDFVSKLSGHKSEVCGLKWSYDNRELASGG-NDNRLFV 317 (415)
Q Consensus 242 ~~~~l~~h~~~V~~l~~~--~~~l~-sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~spdg~~lasg~-~dg~I~i 317 (415)
...+..+. .+..++|+ ++.|+ +++.++.+.+|+++........+..|...+.+++|+|++++|+.++ .++.+.|
T Consensus 122 -~~~~~~~~-~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i 199 (297)
T 2ojh_A 122 -PRLMTKNL-PSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVETRLTHGEGRNDGPDYSPDGRWIYFNSSRTGQMQI 199 (297)
T ss_dssp -CEECCSSS-SEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCEEECCCSSSCEEEEEECTTSSEEEEEECTTSSCEE
T ss_pred -eEEeecCC-CccceEECCCCCEEEEEECCCCceEEEEEECCCCcceEcccCCCccccceECCCCCEEEEEecCCCCccE
Confidence 44455443 48889998 35555 7889999999987544334567777888999999999999888766 5889999
Q ss_pred EECC-CCceeEEeccCCCcEEEEEEcCCCCcEEEEEcCC--------CCCeEEEEECCCCcEEEEe---eCCCCEEEEEE
Q 014934 318 WNQH-STQPVLKYCEHTAAVKAIAWSPHLHGLLASGGGT--------ADRCIRFWNTTTNTHLSCM---DTGSQVCNLVW 385 (415)
Q Consensus 318 wd~~-~~~~~~~~~~h~~~V~~l~~sp~~~~llasggg~--------~d~~I~iwd~~t~~~~~~~---~~~~~V~~l~~ 385 (415)
|++. .+..+..+..|...+..++|+|+++.+++.+... .++.|.+||+.+++..... .+...+..++|
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 279 (297)
T 2ojh_A 200 WRVRVDGSSVERITDSAYGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMDGGNVETLFDLFGGQGTMNSPNW 279 (297)
T ss_dssp EEEETTSSCEEECCCCSEEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEEETTSCSCEEEEEEEESTTTSCSCCB
T ss_pred EEECCCCCCcEEEecCCcccCCeEECCCCCEEEEEEcCCCCCcccccCceEEEEEecCCCCceeeeccCCCCcccccceE
Confidence 9986 5566777888888999999999998666555310 1267999999988753332 45678899999
Q ss_pred CCCCCeEEEEE
Q 014934 386 SKNVNELVSTH 396 (415)
Q Consensus 386 s~~~~~l~s~~ 396 (415)
+|+++.|+++.
T Consensus 280 spdg~~l~~~~ 290 (297)
T 2ojh_A 280 SPDGDEFAYVR 290 (297)
T ss_dssp CTTSSEEEEEE
T ss_pred CCCCCEEEEEE
Confidence 99999998863
No 132
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.89 E-value=2.7e-21 Score=183.61 Aligned_cols=237 Identities=14% Similarity=0.111 Sum_probs=172.0
Q ss_pred ceeEeecCC-CcEEEEE-cC-CeEEEEECC--CCCeEEeEecCCCCCeEEEEEcCCCCeEEEEEC-CCcEEEEEC---CC
Q 014934 169 YLNLVDWSS-HNVLAVG-LG-NCVYLWNAC--SSKVTKLCDLGIDDSVCSVGWANRNTHLAVGTS-HGKVQIWDA---SR 239 (415)
Q Consensus 169 ~i~~l~ws~-~~~la~~-~d-~~V~iwd~~--~~~~~~~~~~~~~~~V~~v~~sp~g~~la~g~~-dg~V~iwd~---~~ 239 (415)
.+..++|+| ++.|+++ .+ +.|.+|++. +++...+..+.....+.+++|+|+|++|++++. ++.|.+||+ .+
T Consensus 39 ~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~ 118 (343)
T 1ri6_A 39 QVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPGSLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLP 118 (343)
T ss_dssp CCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSSCCSEEEECTTSSEEEEEETTTTEEEEEEEETTEE
T ss_pred CCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeeccccccCCCCcEEEEcCCCCEEEEEecCCCeEEEEECCCCcc
Confidence 466789999 6656665 44 899999987 666554443333348899999999998877765 888999999 44
Q ss_pred CeeeEEecCCCccEEEEEee--CCEEEEEe-CCCcEEEEECCCCCccEE----Eec-cccCCeEEEEEeCCCCEEEEEe-
Q 014934 240 CKRVRTMEGHRLRVGALAWS--SSLLSSGS-RDKSILQRDIRAQEDFVS----KLS-GHKSEVCGLKWSYDNRELASGG- 310 (415)
Q Consensus 240 ~~~~~~l~~h~~~V~~l~~~--~~~l~sgs-~dg~I~iwd~~~~~~~~~----~~~-~h~~~V~~l~~spdg~~lasg~- 310 (415)
.+.+..+..+ ..+.+++|+ ++.|++++ .++.|.+||+........ ... .....+.+++|+|++++|++++
T Consensus 119 ~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~ 197 (343)
T 1ri6_A 119 VGVVDVVEGL-DGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNE 197 (343)
T ss_dssp EEEEEEECCC-TTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEET
T ss_pred ccccccccCC-CCceEEEECCCCCEEEEecCCCCEEEEEEecCCCceeeecccccccCCCCCcceEEECCCCCEEEEEeC
Confidence 4555555544 458889998 45677776 899999999987332221 222 2345788999999999776554
Q ss_pred CCCcEEEEECCC--Cce--eEEecc---C---CCcEEEEEEcCCCCcEEEEEcCCCCCeEEEEECC--C--CcEEEEeeC
Q 014934 311 NDNRLFVWNQHS--TQP--VLKYCE---H---TAAVKAIAWSPHLHGLLASGGGTADRCIRFWNTT--T--NTHLSCMDT 376 (415)
Q Consensus 311 ~dg~I~iwd~~~--~~~--~~~~~~---h---~~~V~~l~~sp~~~~llasggg~~d~~I~iwd~~--t--~~~~~~~~~ 376 (415)
.++.|.+||+.. ++. ...+.. . ...+.+++|+|+++.+++++. .++.|.+||+. + .+.+..+..
T Consensus 198 ~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~--~~~~i~v~d~~~~~~~~~~~~~~~~ 275 (343)
T 1ri6_A 198 LNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDR--TASLITVFSVSEDGSVLSKEGFQPT 275 (343)
T ss_dssp TTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEET--TTTEEEEEEECTTSCCEEEEEEEEC
T ss_pred CCCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCCCCEEEEEec--CCCEEEEEEEcCCCCceEEeeeecC
Confidence 889999999953 432 222221 1 235778999999998887775 68999999998 3 345555655
Q ss_pred CCCEEEEEECCCCCeEEEEEecCCCcEEEEECC
Q 014934 377 GSQVCNLVWSKNVNELVSTHGYSQNQIIVWRYP 409 (415)
Q Consensus 377 ~~~V~~l~~s~~~~~l~s~~g~~dg~I~vw~~~ 409 (415)
+..+..++|+|++++|+++ +..++.|.+|++.
T Consensus 276 ~~~~~~~~~s~dg~~l~~~-~~~~~~v~v~~~d 307 (343)
T 1ri6_A 276 ETQPRGFNVDHSGKYLIAA-GQKSHHISVYEIV 307 (343)
T ss_dssp SSSCCCEEECTTSSEEEEE-CTTTCEEEEEEEE
T ss_pred CCccceEEECCCCCEEEEe-cCCCCeEEEEEEc
Confidence 5568899999999988884 3468999999654
No 133
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.89 E-value=1.7e-21 Score=180.44 Aligned_cols=220 Identities=8% Similarity=0.065 Sum_probs=167.3
Q ss_pred cCCeEEEEECCCCCeEEeEecCCCCCeEEEEEcCCCCeEEEEECCCcEEEEECCC-CeeeEEecCC-CccEEEEEee--C
Q 014934 185 LGNCVYLWNACSSKVTKLCDLGIDDSVCSVGWANRNTHLAVGTSHGKVQIWDASR-CKRVRTMEGH-RLRVGALAWS--S 260 (415)
Q Consensus 185 ~d~~V~iwd~~~~~~~~~~~~~~~~~V~~v~~sp~g~~la~g~~dg~V~iwd~~~-~~~~~~l~~h-~~~V~~l~~~--~ 260 (415)
.++.|++||..+++...+. .|...|.+++|+|+|++|++++ ++.|.+||+.+ ++.......+ ...+.+++|+ +
T Consensus 20 ~~~~i~~~d~~~~~~~~~~--~~~~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg 96 (297)
T 2ojh_A 20 MRSSIEIFNIRTRKMRVVW--QTPELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPSPEKVDTGFATICNNDHGISPDG 96 (297)
T ss_dssp CCEEEEEEETTTTEEEEEE--EESSCCEEEEECTTSSEEEEEE-TTEEEEEESSSCCSCEECCCTTCCCBCSCCEECTTS
T ss_pred cceeEEEEeCCCCceeeec--cCCcceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCCceEeccccccccccceEECCCC
Confidence 4678999999998877655 4678999999999999999986 78999999998 7776666555 4778899998 5
Q ss_pred CEEEEEe--CCCcEEEEEC--CCCCccEEEeccccCCeEEEEEeCCCCEEE-EEeCCCcEEEEECC-CCceeEEeccCCC
Q 014934 261 SLLSSGS--RDKSILQRDI--RAQEDFVSKLSGHKSEVCGLKWSYDNRELA-SGGNDNRLFVWNQH-STQPVLKYCEHTA 334 (415)
Q Consensus 261 ~~l~sgs--~dg~I~iwd~--~~~~~~~~~~~~h~~~V~~l~~spdg~~la-sg~~dg~I~iwd~~-~~~~~~~~~~h~~ 334 (415)
..|++++ .++.+.+|.+ .... ...+..+. .+..++|+|++++|+ +++.++.+.||++. .......+..|..
T Consensus 97 ~~l~~~~~~~~~~~~l~~~~~~~~~--~~~~~~~~-~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 173 (297)
T 2ojh_A 97 ALYAISDKVEFGKSAIYLLPSTGGT--PRLMTKNL-PSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVETRLTHGEG 173 (297)
T ss_dssp SEEEEEECTTTSSCEEEEEETTCCC--CEECCSSS-SEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCEEECCCSSS
T ss_pred CEEEEEEeCCCCcceEEEEECCCCc--eEEeecCC-CccceEECCCCCEEEEEECCCCceEEEEEECCCCcceEcccCCC
Confidence 7888888 3345555544 4443 34444443 489999999999887 77889989999853 2234456677888
Q ss_pred cEEEEEEcCCCCcEEEEEcCCCCCeEEEEECC-CCcEEEEee-CCCCEEEEEECCCCCeEEEEEec---------CCCcE
Q 014934 335 AVKAIAWSPHLHGLLASGGGTADRCIRFWNTT-TNTHLSCMD-TGSQVCNLVWSKNVNELVSTHGY---------SQNQI 403 (415)
Q Consensus 335 ~V~~l~~sp~~~~llasggg~~d~~I~iwd~~-t~~~~~~~~-~~~~V~~l~~s~~~~~l~s~~g~---------~dg~I 403 (415)
.+.+++|+|+++.+++++. .++.+++|++. .+..+..+. +...+..+.|+|++++|+++... .++.|
T Consensus 174 ~~~~~~~s~dg~~l~~~~~--~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l 251 (297)
T 2ojh_A 174 RNDGPDYSPDGRWIYFNSS--RTGQMQIWRVRVDGSSVERITDSAYGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRV 251 (297)
T ss_dssp CEEEEEECTTSSEEEEEEC--TTSSCEEEEEETTSSCEEECCCCSEEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEE
T ss_pred ccccceECCCCCEEEEEec--CCCCccEEEECCCCCCcEEEecCCcccCCeEECCCCCEEEEEEcCCCCCcccccCceEE
Confidence 9999999999987777664 58889999875 444444443 45678899999999999885332 12579
Q ss_pred EEEECCCCc
Q 014934 404 IVWRYPTMS 412 (415)
Q Consensus 404 ~vw~~~s~~ 412 (415)
.+||+.+.+
T Consensus 252 ~~~d~~~~~ 260 (297)
T 2ojh_A 252 QLMDMDGGN 260 (297)
T ss_dssp EEEETTSCS
T ss_pred EEEecCCCC
Confidence 999998764
No 134
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.89 E-value=1.1e-20 Score=179.28 Aligned_cols=229 Identities=9% Similarity=0.085 Sum_probs=177.5
Q ss_pred CcEEEEE-cCCeEEEEECCCCCeEEeEecCCCCCeEEEEEcCCCCeEEEEEC-CCcEEEEECCCCee-eEEecCCCccEE
Q 014934 178 HNVLAVG-LGNCVYLWNACSSKVTKLCDLGIDDSVCSVGWANRNTHLAVGTS-HGKVQIWDASRCKR-VRTMEGHRLRVG 254 (415)
Q Consensus 178 ~~~la~~-~d~~V~iwd~~~~~~~~~~~~~~~~~V~~v~~sp~g~~la~g~~-dg~V~iwd~~~~~~-~~~l~~h~~~V~ 254 (415)
+.+++++ .++.|++||..+++.......+ ...+ +++|+|+|+++++++. ++.|.+||+.+++. ...+..+.....
T Consensus 10 ~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~-~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~ 87 (331)
T 3u4y_A 10 NFGIVVEQHLRRISFFSTDTLEILNQITLG-YDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQEGQSSMA 87 (331)
T ss_dssp CEEEEEEGGGTEEEEEETTTCCEEEEEECC-CCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEEECSSCCC
T ss_pred CEEEEEecCCCeEEEEeCcccceeeeEEcc-CCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEecccCCCCcc
Confidence 3444454 5789999999999998877643 4556 9999999997777666 88999999999887 777776766666
Q ss_pred EEEee--CCEEEEEeCCC---cEEEEECCCCCccEEEeccccCCeEEEEEeCCCCEEE-EEeCCCc-EEEEECCCCceeE
Q 014934 255 ALAWS--SSLLSSGSRDK---SILQRDIRAQEDFVSKLSGHKSEVCGLKWSYDNRELA-SGGNDNR-LFVWNQHSTQPVL 327 (415)
Q Consensus 255 ~l~~~--~~~l~sgs~dg---~I~iwd~~~~~~~~~~~~~h~~~V~~l~~spdg~~la-sg~~dg~-I~iwd~~~~~~~~ 327 (415)
+++|+ +++|+++..++ .|.+||+.+++ .+..+.. .....+++|+|+|++|+ ++..++. |.+|++.....+.
T Consensus 88 ~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~-~~~~~~~-~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~ 165 (331)
T 3u4y_A 88 DVDITPDDQFAVTVTGLNHPFNMQSYSFLKNK-FISTIPI-PYDAVGIAISPNGNGLILIDRSSANTVRRFKIDADGVLF 165 (331)
T ss_dssp CEEECTTSSEEEECCCSSSSCEEEEEETTTTE-EEEEEEC-CTTEEEEEECTTSSCEEEEEETTTTEEEEEEECTTCCEE
T ss_pred ceEECCCCCEEEEecCCCCcccEEEEECCCCC-eEEEEEC-CCCccceEECCCCCEEEEEecCCCceEEEEEECCCCcEe
Confidence 68888 46777555553 89999998876 3444443 45679999999998555 4556688 9999987643331
Q ss_pred ----EeccCCCcEEEEEEcCCCCcEEEEEcCCCCCeEEEEECCCCcE---EEEeeCCCCEEEEEECCCCCeEEEEEecCC
Q 014934 328 ----KYCEHTAAVKAIAWSPHLHGLLASGGGTADRCIRFWNTTTNTH---LSCMDTGSQVCNLVWSKNVNELVSTHGYSQ 400 (415)
Q Consensus 328 ----~~~~h~~~V~~l~~sp~~~~llasggg~~d~~I~iwd~~t~~~---~~~~~~~~~V~~l~~s~~~~~l~s~~g~~d 400 (415)
....+...+..++|+|+++.+++++. .++.|++||+.+++. +..+..+..+..++|+|+|++|+++ ...+
T Consensus 166 ~~~~~~~~~~~~~~~~~~spdg~~l~v~~~--~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~-~~~~ 242 (331)
T 3u4y_A 166 DTGQEFISGGTRPFNITFTPDGNFAFVANL--IGNSIGILETQNPENITLLNAVGTNNLPGTIVVSRDGSTVYVL-TEST 242 (331)
T ss_dssp EEEEEEECSSSSEEEEEECTTSSEEEEEET--TTTEEEEEECSSTTSCEEEEEEECSSCCCCEEECTTSSEEEEE-CSSE
T ss_pred ecCCccccCCCCccceEECCCCCEEEEEeC--CCCeEEEEECCCCcccceeeeccCCCCCceEEECCCCCEEEEE-EcCC
Confidence 22244566899999999998888876 689999999999998 8888888888999999999988775 3457
Q ss_pred CcEEEEECCCCcc
Q 014934 401 NQIIVWRYPTMSK 413 (415)
Q Consensus 401 g~I~vw~~~s~~~ 413 (415)
+.|.+||..+++.
T Consensus 243 ~~i~~~d~~~~~~ 255 (331)
T 3u4y_A 243 VDVFNFNQLSGTL 255 (331)
T ss_dssp EEEEEEETTTTEE
T ss_pred CEEEEEECCCCce
Confidence 7899999987653
No 135
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.89 E-value=8.2e-21 Score=193.89 Aligned_cols=239 Identities=12% Similarity=0.102 Sum_probs=189.5
Q ss_pred eeEeecCC-CcEEEEE-cCCeEEEEEC--CCCCeEEeEecCCCCCeEEEEEcC----CCCeEEEEEC-CCcEEEEECCCC
Q 014934 170 LNLVDWSS-HNVLAVG-LGNCVYLWNA--CSSKVTKLCDLGIDDSVCSVGWAN----RNTHLAVGTS-HGKVQIWDASRC 240 (415)
Q Consensus 170 i~~l~ws~-~~~la~~-~d~~V~iwd~--~~~~~~~~~~~~~~~~V~~v~~sp----~g~~la~g~~-dg~V~iwd~~~~ 240 (415)
+..++++| +++|+++ .++.|++||+ .++++...+. +...+.+++|+| +|++|++++. +++|.+||..++
T Consensus 181 ~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~--~g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~ 258 (543)
T 1nir_A 181 VHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIK--IGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETL 258 (543)
T ss_dssp EEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEE--CCSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTC
T ss_pred cceEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEEEe--cCCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEecccc
Confidence 77899999 6666665 6799999999 7887776665 456789999999 9999999885 899999999999
Q ss_pred eeeEEecCC----------C-ccEEEEEeeC---CEEEEEeCCCcEEEEECCCCCccEEEeccccCCeEEEEEeCCCCEE
Q 014934 241 KRVRTMEGH----------R-LRVGALAWSS---SLLSSGSRDKSILQRDIRAQEDFVSKLSGHKSEVCGLKWSYDNREL 306 (415)
Q Consensus 241 ~~~~~l~~h----------~-~~V~~l~~~~---~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~spdg~~l 306 (415)
+++..+..+ . ..+.++.+++ .++++...++.|.+||.............+...+.++.|+|+|++|
T Consensus 259 ~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~~~~i~~~~~~~~~~~spdg~~l 338 (543)
T 1nir_A 259 EPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSIGAAPFLHDGGWDSSHRYF 338 (543)
T ss_dssp CEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTSSSCEEEEEECCSSCCCEEECTTSCEE
T ss_pred ccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCCCcceeEEeccCcCccCceECCCCCEE
Confidence 988887642 2 3788999983 4777888899999999987653332222456678899999999987
Q ss_pred EEEe-CCCcEEEEECCCCceeEEecc----CCCcEEEEEEcCCCCcEEEEEcCCCCCeEEEEECCC-------CcEEEEe
Q 014934 307 ASGG-NDNRLFVWNQHSTQPVLKYCE----HTAAVKAIAWSPHLHGLLASGGGTADRCIRFWNTTT-------NTHLSCM 374 (415)
Q Consensus 307 asg~-~dg~I~iwd~~~~~~~~~~~~----h~~~V~~l~~sp~~~~llasggg~~d~~I~iwd~~t-------~~~~~~~ 374 (415)
++++ .+++|.+||+.+++.+..+.. |.+....+ ++|++..+++++. ..|++|.+||+.+ +++++.+
T Consensus 339 ~va~~~~~~v~v~D~~tg~l~~~i~~g~~ph~g~g~~~-~~p~~g~~~~s~~-~~d~~V~v~d~~~~~~~~~~~~~v~~l 416 (543)
T 1nir_A 339 MTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGANF-VHPKYGPVWSTSH-LGDGSISLIGTDPKNHPQYAWKKVAEL 416 (543)
T ss_dssp EEEEGGGTEEEEEETTTTEEEEEEECSSSBCCTTCEEE-EETTTEEEEEEEB-SSSSEEEEEECCTTTCTTTBTSEEEEE
T ss_pred EEEecCCCeEEEEECCCCeEEEeeccCCCCCCCCCccc-CCCCCccEEEecc-CCCceEEEEEeCCCCCchhcCeEEEEE
Confidence 6654 589999999999998888764 65444433 5787566888873 1479999999998 8899999
Q ss_pred eC-CCCEEEEEECCCCCeEEEEEec-------CCCcEEEEECCCCccc
Q 014934 375 DT-GSQVCNLVWSKNVNELVSTHGY-------SQNQIIVWRYPTMSKV 414 (415)
Q Consensus 375 ~~-~~~V~~l~~s~~~~~l~s~~g~-------~dg~I~vw~~~s~~~l 414 (415)
.. +..+..+.++|++++|++ +. .++.|.|||+.+++.+
T Consensus 417 ~~~g~~~~~v~~~pdg~~l~v--~~~~~~~~~~~~~v~v~d~~~~~~~ 462 (543)
T 1nir_A 417 QGQGGGSLFIKTHPKSSHLYV--DTTFNPDARISQSVAVFDLKNLDAK 462 (543)
T ss_dssp ECSCSCCCCEECCTTCCEEEE--CCTTCSSHHHHTCEEEEETTCTTSC
T ss_pred EcCCCCceEEEcCCCCCcEEE--ecCCCCCcccCceEEEEECCCCCCC
Confidence 84 467788999999999999 43 1679999999988753
No 136
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.88 E-value=6.8e-20 Score=175.00 Aligned_cols=223 Identities=10% Similarity=0.067 Sum_probs=181.1
Q ss_pred eeEeecCC-CcEE-EEEc-CCeEEEEECCCCCeEEeEecCCCC--------CeEEEEEcCCCCeEEEEE--CCCcEEEEE
Q 014934 170 LNLVDWSS-HNVL-AVGL-GNCVYLWNACSSKVTKLCDLGIDD--------SVCSVGWANRNTHLAVGT--SHGKVQIWD 236 (415)
Q Consensus 170 i~~l~ws~-~~~l-a~~~-d~~V~iwd~~~~~~~~~~~~~~~~--------~V~~v~~sp~g~~la~g~--~dg~V~iwd 236 (415)
...+.|++ ++.+ +++. ++.|++||..+++....+..+... .+.+++|+|+|++++++. .++.|.+||
T Consensus 91 ~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d 170 (353)
T 3vgz_A 91 PFGATINNTTQTLWFGNTVNSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVD 170 (353)
T ss_dssp CCSEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEE
T ss_pred cceEEECCCCCEEEEEecCCCEEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEc
Confidence 45678888 5544 4443 589999999999988877654322 278999999999888876 478899999
Q ss_pred CCCCeeeEEecCCCccEEEEEee--CCEEEEEeCCCcEEEEECCCCCccEEEec----cccCCeEEEEEeCCCCEEEEEe
Q 014934 237 ASRCKRVRTMEGHRLRVGALAWS--SSLLSSGSRDKSILQRDIRAQEDFVSKLS----GHKSEVCGLKWSYDNRELASGG 310 (415)
Q Consensus 237 ~~~~~~~~~l~~h~~~V~~l~~~--~~~l~sgs~dg~I~iwd~~~~~~~~~~~~----~h~~~V~~l~~spdg~~lasg~ 310 (415)
..+++.+..+..+...+.+++|+ ++.|++++.++.|.+||+.++. ....+. ++...+.+++|+|++++|++++
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~-~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~ 249 (353)
T 3vgz_A 171 GGNIKLKTAIQNTGKMSTGLALDSEGKRLYTTNADGELITIDTADNK-ILSRKKLLDDGKEHFFINISLDTARQRAFITD 249 (353)
T ss_dssp TTTTEEEEEECCCCTTCCCCEEETTTTEEEEECTTSEEEEEETTTTE-EEEEEECCCSSSCCCEEEEEEETTTTEEEEEE
T ss_pred CCCCceEEEecCCCCccceEEECCCCCEEEEEcCCCeEEEEECCCCe-EEEEEEcCCCCCCcccceEEECCCCCEEEEEe
Confidence 99999988887666668888897 5789999999999999999876 344443 2456788999999999877666
Q ss_pred C-CCcEEEEECCCCceeEEeccCCCcEEEEEEcCCCCcEEEEEcCCCCCeEEEEECCCCcEEEEeeCCCCEEEEEECCCC
Q 014934 311 N-DNRLFVWNQHSTQPVLKYCEHTAAVKAIAWSPHLHGLLASGGGTADRCIRFWNTTTNTHLSCMDTGSQVCNLVWSKNV 389 (415)
Q Consensus 311 ~-dg~I~iwd~~~~~~~~~~~~h~~~V~~l~~sp~~~~llasggg~~d~~I~iwd~~t~~~~~~~~~~~~V~~l~~s~~~ 389 (415)
. ++.|.+||+.+++.+..+..... ..++|+|+++.++++.. .++.|.+||+.+++.+..+..+..+.+++|+++|
T Consensus 250 ~~~~~v~~~d~~~~~~~~~~~~~~~--~~~~~s~dg~~l~v~~~--~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg 325 (353)
T 3vgz_A 250 SKAAEVLVVDTRNGNILAKVAAPES--LAVLFNPARNEAYVTHR--QAGKVSVIDAKSYKVVKTFDTPTHPNSLALSADG 325 (353)
T ss_dssp SSSSEEEEEETTTCCEEEEEECSSC--CCEEEETTTTEEEEEET--TTTEEEEEETTTTEEEEEEECCSEEEEEEECTTS
T ss_pred CCCCEEEEEECCCCcEEEEEEcCCC--ceEEECCCCCEEEEEEC--CCCeEEEEECCCCeEEEEEecCCCCCeEEEcCCC
Confidence 4 58999999999998887765432 57999999998888876 6899999999999999999888889999999999
Q ss_pred CeEEEEEe
Q 014934 390 NELVSTHG 397 (415)
Q Consensus 390 ~~l~s~~g 397 (415)
+.|+++..
T Consensus 326 ~~l~v~~~ 333 (353)
T 3vgz_A 326 KTLYVSVK 333 (353)
T ss_dssp CEEEEEEE
T ss_pred CEEEEEEc
Confidence 98877643
No 137
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.88 E-value=4.6e-20 Score=175.08 Aligned_cols=234 Identities=9% Similarity=0.018 Sum_probs=174.6
Q ss_pred EeecCC-CcEE-EEEc-CCeEEEEECCCCCe-EEeEecCCCCCeEEEEEcCCCCeEEEEECCC---cEEEEECCCCeeeE
Q 014934 172 LVDWSS-HNVL-AVGL-GNCVYLWNACSSKV-TKLCDLGIDDSVCSVGWANRNTHLAVGTSHG---KVQIWDASRCKRVR 244 (415)
Q Consensus 172 ~l~ws~-~~~l-a~~~-d~~V~iwd~~~~~~-~~~~~~~~~~~V~~v~~sp~g~~la~g~~dg---~V~iwd~~~~~~~~ 244 (415)
.++|+| ++.| +++. ++.|++||..+++. ..... .+.....+++|+|+|++|+++..++ .|.+||+.+++.+.
T Consensus 44 ~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~-~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~ 122 (331)
T 3u4y_A 44 DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQ-EGQSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFIS 122 (331)
T ss_dssp EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEE-ECSSCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTTEEEE
T ss_pred eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEecc-cCCCCccceEECCCCCEEEEecCCCCcccEEEEECCCCCeEE
Confidence 789999 5544 4444 67999999999987 55554 3344444499999999999655553 89999999999888
Q ss_pred EecCCCccEEEEEeeC--C-EEEEEeCCCc-EEEEECCCCCccE---EEeccccCCeEEEEEeCCCCEEEE-EeCCCcEE
Q 014934 245 TMEGHRLRVGALAWSS--S-LLSSGSRDKS-ILQRDIRAQEDFV---SKLSGHKSEVCGLKWSYDNRELAS-GGNDNRLF 316 (415)
Q Consensus 245 ~l~~h~~~V~~l~~~~--~-~l~sgs~dg~-I~iwd~~~~~~~~---~~~~~h~~~V~~l~~spdg~~las-g~~dg~I~ 316 (415)
.+..+ ....+++|++ + +++++..++. |.+|++....... .........+.+++|+|+|++|++ +..++.|.
T Consensus 123 ~~~~~-~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~ 201 (331)
T 3u4y_A 123 TIPIP-YDAVGIAISPNGNGLILIDRSSANTVRRFKIDADGVLFDTGQEFISGGTRPFNITFTPDGNFAFVANLIGNSIG 201 (331)
T ss_dssp EEECC-TTEEEEEECTTSSCEEEEEETTTTEEEEEEECTTCCEEEEEEEEECSSSSEEEEEECTTSSEEEEEETTTTEEE
T ss_pred EEECC-CCccceEECCCCCEEEEEecCCCceEEEEEECCCCcEeecCCccccCCCCccceEECCCCCEEEEEeCCCCeEE
Confidence 77744 4568999984 3 5555566688 9999998654221 112234456899999999996655 45689999
Q ss_pred EEECCCCce---eEEeccCCCcEEEEEEcCCCCcEEEEEcCCCCCeEEEEECCCCcE--EEEeeCC--------CCEEEE
Q 014934 317 VWNQHSTQP---VLKYCEHTAAVKAIAWSPHLHGLLASGGGTADRCIRFWNTTTNTH--LSCMDTG--------SQVCNL 383 (415)
Q Consensus 317 iwd~~~~~~---~~~~~~h~~~V~~l~~sp~~~~llasggg~~d~~I~iwd~~t~~~--~~~~~~~--------~~V~~l 383 (415)
+||+.+++. +..+.. ...+..++|+|+++.++++.. .++.|.+||+.+++. +..+... ..+..+
T Consensus 202 v~d~~~~~~~~~~~~~~~-~~~~~~~~~spdg~~l~v~~~--~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (331)
T 3u4y_A 202 ILETQNPENITLLNAVGT-NNLPGTIVVSRDGSTVYVLTE--STVDVFNFNQLSGTLSFVKSFGHGLLIDPRPLFGANQM 278 (331)
T ss_dssp EEECSSTTSCEEEEEEEC-SSCCCCEEECTTSSEEEEECS--SEEEEEEEETTTTEEEEEEEEECCCCCCCGGGTTCCCE
T ss_pred EEECCCCcccceeeeccC-CCCCceEEECCCCCEEEEEEc--CCCEEEEEECCCCceeeecccccccccCCCCcccccce
Confidence 999999888 777754 467789999999997777765 588899999999887 4443322 123558
Q ss_pred EECCCCCeEEEEEecCCCcEEEEECCCC
Q 014934 384 VWSKNVNELVSTHGYSQNQIIVWRYPTM 411 (415)
Q Consensus 384 ~~s~~~~~l~s~~g~~dg~I~vw~~~s~ 411 (415)
+|+|++++|+++ +..++.|.+|++...
T Consensus 279 ~~spdg~~l~v~-~~~~~~v~v~d~~~~ 305 (331)
T 3u4y_A 279 ALNKTETKLFIS-ANISRELKVFTISGK 305 (331)
T ss_dssp EECTTSSEEEEE-ETTTTEEEEEETTSC
T ss_pred EECCCCCEEEEe-cCCCCcEEEEEecCC
Confidence 999999998775 456789999999764
No 138
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.88 E-value=2.8e-20 Score=176.16 Aligned_cols=222 Identities=11% Similarity=0.036 Sum_probs=172.6
Q ss_pred EEEEcCCeEEEEECCCCCeEEeEecCCCC-CeEEEEEcCCCCeEEEE-ECCCcEEEEECCCCeeeEEecCC-----CccE
Q 014934 181 LAVGLGNCVYLWNACSSKVTKLCDLGIDD-SVCSVGWANRNTHLAVG-TSHGKVQIWDASRCKRVRTMEGH-----RLRV 253 (415)
Q Consensus 181 la~~~d~~V~iwd~~~~~~~~~~~~~~~~-~V~~v~~sp~g~~la~g-~~dg~V~iwd~~~~~~~~~l~~h-----~~~V 253 (415)
++.+.++.|++||..+++....+..++.. .+.+++|+|+|++++++ ..++.|.+||+.+++.+..+... ...+
T Consensus 5 v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~ 84 (337)
T 1pby_B 5 LAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERVKSL 84 (337)
T ss_dssp EEEETTTEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEEECT
T ss_pred EEcCCCCeEEEEECCCCcEEEEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCcccccccc
Confidence 34446899999999999888777654432 48899999999876554 55789999999999887766531 1256
Q ss_pred EEEEee--CCEEEEEe------------CCCcEEEEECCCCCccEEEeccccCCeEEEEEeCCCCEEEEEeCCCcEEEEE
Q 014934 254 GALAWS--SSLLSSGS------------RDKSILQRDIRAQEDFVSKLSGHKSEVCGLKWSYDNRELASGGNDNRLFVWN 319 (415)
Q Consensus 254 ~~l~~~--~~~l~sgs------------~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~spdg~~lasg~~dg~I~iwd 319 (415)
.+++|+ ++.|++++ .++.|.+||+.+.. ....+.. ...+.+++|+|+|++|+++ ++.|++||
T Consensus 85 ~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~-~~~~~~~-~~~~~~~~~s~dg~~l~~~--~~~i~~~d 160 (337)
T 1pby_B 85 FGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLS-RRKAFEA-PRQITMLAWARDGSKLYGL--GRDLHVMD 160 (337)
T ss_dssp TCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTE-EEEEEEC-CSSCCCEEECTTSSCEEEE--SSSEEEEE
T ss_pred cceEECCCCCEEEEEecccccccccccccCceEEEEECCCCc-EEEEEeC-CCCcceeEECCCCCEEEEe--CCeEEEEE
Confidence 678888 46787776 67999999998765 3444443 4568889999999988888 68899999
Q ss_pred CCCCceeEEeccCC------------------------------------------------------------------
Q 014934 320 QHSTQPVLKYCEHT------------------------------------------------------------------ 333 (415)
Q Consensus 320 ~~~~~~~~~~~~h~------------------------------------------------------------------ 333 (415)
+.+++.+..+..+.
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~ 240 (337)
T 1pby_B 161 PEAGTLVEDKPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMD 240 (337)
T ss_dssp TTTTEEEEEECSTTTTTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEEECS
T ss_pred CCCCcEeeeeeccccCCCceeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCceEeecCCCC
Confidence 98876654443221
Q ss_pred CcEEEEEEcCCCCcEEEEEcCCCCCeEEEEECCCCcEEEEeeCCCCEEEEEECCCCCeEEEEEecCCCcEEEEECCCCcc
Q 014934 334 AAVKAIAWSPHLHGLLASGGGTADRCIRFWNTTTNTHLSCMDTGSQVCNLVWSKNVNELVSTHGYSQNQIIVWRYPTMSK 413 (415)
Q Consensus 334 ~~V~~l~~sp~~~~llasggg~~d~~I~iwd~~t~~~~~~~~~~~~V~~l~~s~~~~~l~s~~g~~dg~I~vw~~~s~~~ 413 (415)
..+.+++|+|+++.++++ ++.|.+||+.+++.+..+..+..+.+++|+|+|++|++ +..++.|.+||+.+++.
T Consensus 241 ~~~~~~~~s~dg~~l~~~-----~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~--~~~~~~i~v~d~~~~~~ 313 (337)
T 1pby_B 241 VFYFSTAVNPAKTRAFGA-----YNVLESFDLEKNASIKRVPLPHSYYSVNVSTDGSTVWL--GGALGDLAAYDAETLEK 313 (337)
T ss_dssp SCEEEEEECTTSSEEEEE-----ESEEEEEETTTTEEEEEEECSSCCCEEEECTTSCEEEE--ESBSSEEEEEETTTCCE
T ss_pred CceeeEEECCCCCEEEEe-----CCeEEEEECCCCcCcceecCCCceeeEEECCCCCEEEE--EcCCCcEEEEECcCCcE
Confidence 234568999999866653 58999999999999988887788899999999999988 45689999999988764
No 139
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.87 E-value=4.3e-20 Score=175.94 Aligned_cols=230 Identities=13% Similarity=0.078 Sum_probs=173.6
Q ss_pred eecCC-CcEEEEE-cCCeEEEEECCCCCeEEeEecCCCCCeEEEEEcCCCCeEEEE-ECCCcEEEEECCCCeeeEEecCC
Q 014934 173 VDWSS-HNVLAVG-LGNCVYLWNACSSKVTKLCDLGIDDSVCSVGWANRNTHLAVG-TSHGKVQIWDASRCKRVRTMEGH 249 (415)
Q Consensus 173 l~ws~-~~~la~~-~d~~V~iwd~~~~~~~~~~~~~~~~~V~~v~~sp~g~~la~g-~~dg~V~iwd~~~~~~~~~l~~h 249 (415)
+++++ +.+++++ .++.|++||..+++....+..+....+..++|+|+|++++++ ..++.|.+||+.+++.+..+..+
T Consensus 5 ~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~~~ 84 (349)
T 1jmx_B 5 PALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANLS 84 (349)
T ss_dssp CCCCTTCEEEEEEETTTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEESC
T ss_pred ccccCCCEEEEEeCCCCeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEEcc
Confidence 34556 4555554 678999999999988877765433368899999999866554 46889999999999888776532
Q ss_pred C------ccEEEEEee--CCEEEEEeCC------------CcEEEEECCCCCc--cEEEeccccCCeEEEEEeCCCCEEE
Q 014934 250 R------LRVGALAWS--SSLLSSGSRD------------KSILQRDIRAQED--FVSKLSGHKSEVCGLKWSYDNRELA 307 (415)
Q Consensus 250 ~------~~V~~l~~~--~~~l~sgs~d------------g~I~iwd~~~~~~--~~~~~~~h~~~V~~l~~spdg~~la 307 (415)
. ..+.+++|+ +++|++++.+ +.|.+||+.++.. .+.... +...+.+++|+|+|+ ++
T Consensus 85 ~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~-~~~~~~~~~~s~dg~-l~ 162 (349)
T 1jmx_B 85 SVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFP-MPRQVYLMRAADDGS-LY 162 (349)
T ss_dssp CSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEE-CCSSCCCEEECTTSC-EE
T ss_pred cccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeecc-CCCcccceeECCCCc-EE
Confidence 2 236778887 4688888765 8999999987431 123333 334688999999999 55
Q ss_pred EEeCCCcEEEEECCCCceeEEeccCC------------------------------------------------------
Q 014934 308 SGGNDNRLFVWNQHSTQPVLKYCEHT------------------------------------------------------ 333 (415)
Q Consensus 308 sg~~dg~I~iwd~~~~~~~~~~~~h~------------------------------------------------------ 333 (415)
+++. .|++||+.+++.+..+..+.
T Consensus 163 ~~~~--~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~ 240 (349)
T 1jmx_B 163 VAGP--DIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDL 240 (349)
T ss_dssp EESS--SEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEET
T ss_pred EccC--cEEEEeCCCCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCccccccceeEEEEec
Confidence 5544 49999999888776654321
Q ss_pred --------------CcEEEEEEcC-CCCcEEEEEcCCCCCeEEEEECCCCcEEEEeeCCCCEEEEEECCCCCeEEEEEec
Q 014934 334 --------------AAVKAIAWSP-HLHGLLASGGGTADRCIRFWNTTTNTHLSCMDTGSQVCNLVWSKNVNELVSTHGY 398 (415)
Q Consensus 334 --------------~~V~~l~~sp-~~~~llasggg~~d~~I~iwd~~t~~~~~~~~~~~~V~~l~~s~~~~~l~s~~g~ 398 (415)
..+..++|+| +++.++++ ++.|.+||+.+++.+..+..+..+.+++|+++++.|++ +.
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~-----~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~--~~ 313 (349)
T 1jmx_B 241 KTGKTHTQEFADLTELYFTGLRSPKDPNQIYGV-----LNRLAKYDLKQRKLIKAANLDHTYYCVAFDKKGDKLYL--GG 313 (349)
T ss_dssp TTCCEEEEEEEECSSCEEEEEECSSCTTEEEEE-----ESEEEEEETTTTEEEEEEECSSCCCEEEECSSSSCEEE--ES
T ss_pred cCCcEEecccccCCCcceeeEecCCCCCEEEEE-----cCeEEEEECccCeEEEEEcCCCCccceEECCCCCEEEE--ec
Confidence 1345677889 88855553 67999999999999888887777889999999999988 45
Q ss_pred CCCcEEEEECCCCcc
Q 014934 399 SQNQIIVWRYPTMSK 413 (415)
Q Consensus 399 ~dg~I~vw~~~s~~~ 413 (415)
.++.|.+||..+++.
T Consensus 314 ~~~~v~v~d~~~~~~ 328 (349)
T 1jmx_B 314 TFNDLAVFNPDTLEK 328 (349)
T ss_dssp BSSEEEEEETTTTEE
T ss_pred CCCeEEEEeccccce
Confidence 679999999988764
No 140
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.87 E-value=1.1e-19 Score=185.48 Aligned_cols=228 Identities=12% Similarity=0.106 Sum_probs=177.6
Q ss_pred cCC-CcEEEEE-cCCeEEEEECCCCCeEEeEecCCCCCeEEEEEcCCCCeEEEEECCCcEEEEEC--CCCeeeEEecCCC
Q 014934 175 WSS-HNVLAVG-LGNCVYLWNACSSKVTKLCDLGIDDSVCSVGWANRNTHLAVGTSHGKVQIWDA--SRCKRVRTMEGHR 250 (415)
Q Consensus 175 ws~-~~~la~~-~d~~V~iwd~~~~~~~~~~~~~~~~~V~~v~~sp~g~~la~g~~dg~V~iwd~--~~~~~~~~l~~h~ 250 (415)
++| +.+++++ .++.|.+||..++++...+..++. +.+++|+|+|++|++++.++.|.+||+ .+++.+..+. +.
T Consensus 145 ~~p~~~~~vs~~~d~~V~v~D~~t~~~~~~i~~g~~--~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~-~g 221 (543)
T 1nir_A 145 LDLPNLFSVTLRDAGQIALVDGDSKKIVKVIDTGYA--VHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIK-IG 221 (543)
T ss_dssp CCGGGEEEEEEGGGTEEEEEETTTCCEEEEEECSTT--EEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEE-CC
T ss_pred cCCCCEEEEEEcCCCeEEEEECCCceEEEEEecCcc--cceEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEEEe-cC
Confidence 556 4455555 468999999999999888875543 899999999999999999999999999 8888888888 44
Q ss_pred ccEEEEEeeC------CEEEEEe-CCCcEEEEECCCCCccEEEecc----------cc-CCeEEEEEeCCCCE-EEEEeC
Q 014934 251 LRVGALAWSS------SLLSSGS-RDKSILQRDIRAQEDFVSKLSG----------HK-SEVCGLKWSYDNRE-LASGGN 311 (415)
Q Consensus 251 ~~V~~l~~~~------~~l~sgs-~dg~I~iwd~~~~~~~~~~~~~----------h~-~~V~~l~~spdg~~-lasg~~ 311 (415)
..+..++|++ ++|++++ .+++|.+||..+.+ ++..+.. |. ..+.++.++|++.. +++...
T Consensus 222 ~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~-~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~ 300 (543)
T 1nir_A 222 IEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLE-PKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKE 300 (543)
T ss_dssp SEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCC-EEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETT
T ss_pred CCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccc-cceeecccCcccCccccccCCceEEEEECCCCCEEEEEECC
Confidence 5678999975 5777777 58999999998876 4555543 22 36899999997765 556778
Q ss_pred CCcEEEEECCCCceeE--EeccCCCcEEEEEEcCCCCcEEEEEcCCCCCeEEEEECCCCcEEEEeeCC-----CCEEEEE
Q 014934 312 DNRLFVWNQHSTQPVL--KYCEHTAAVKAIAWSPHLHGLLASGGGTADRCIRFWNTTTNTHLSCMDTG-----SQVCNLV 384 (415)
Q Consensus 312 dg~I~iwd~~~~~~~~--~~~~h~~~V~~l~~sp~~~~llasggg~~d~~I~iwd~~t~~~~~~~~~~-----~~V~~l~ 384 (415)
++.|.+||..+.+.+. .+ .+...+..++|+|+++++++++. .++.|.+||+.+++++..+..+ .....+
T Consensus 301 ~g~i~vvd~~~~~~l~~~~i-~~~~~~~~~~~spdg~~l~va~~--~~~~v~v~D~~tg~l~~~i~~g~~ph~g~g~~~- 376 (543)
T 1nir_A 301 TGKVLLVNYKDIDNLTVTSI-GAAPFLHDGGWDSSHRYFMTAAN--NSNKVAVIDSKDRRLSALVDVGKTPHPGRGANF- 376 (543)
T ss_dssp TTEEEEEECTTSSSCEEEEE-ECCSSCCCEEECTTSCEEEEEEG--GGTEEEEEETTTTEEEEEEECSSSBCCTTCEEE-
T ss_pred CCeEEEEEecCCCcceeEEe-ccCcCccCceECCCCCEEEEEec--CCCeEEEEECCCCeEEEeeccCCCCCCCCCccc-
Confidence 8999999998876544 44 46667889999999998888876 6899999999999999888732 223333
Q ss_pred ECCCCCeEEEEEecCCCcEEEEECCC
Q 014934 385 WSKNVNELVSTHGYSQNQIIVWRYPT 410 (415)
Q Consensus 385 ~s~~~~~l~s~~g~~dg~I~vw~~~s 410 (415)
++|++..++++....|++|.||++.+
T Consensus 377 ~~p~~g~~~~s~~~~d~~V~v~d~~~ 402 (543)
T 1nir_A 377 VHPKYGPVWSTSHLGDGSISLIGTDP 402 (543)
T ss_dssp EETTTEEEEEEEBSSSSEEEEEECCT
T ss_pred CCCCCccEEEeccCCCceEEEEEeCC
Confidence 46774444443223689999999987
No 141
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.87 E-value=2.3e-21 Score=204.03 Aligned_cols=234 Identities=14% Similarity=0.129 Sum_probs=175.9
Q ss_pred eeEeecCC-CcEEEEEcCCeEEEEECCCCCeEEeEecCCCC---CeEEEEEcCCCCeEEEEECC---------CcEEEEE
Q 014934 170 LNLVDWSS-HNVLAVGLGNCVYLWNACSSKVTKLCDLGIDD---SVCSVGWANRNTHLAVGTSH---------GKVQIWD 236 (415)
Q Consensus 170 i~~l~ws~-~~~la~~~d~~V~iwd~~~~~~~~~~~~~~~~---~V~~v~~sp~g~~la~g~~d---------g~V~iwd 236 (415)
...++|+| +.+++++.++.|++||..+++...++. .+.. .|.+++|+|||++||+++.+ +.|.+||
T Consensus 19 ~~~~~~spdg~~~~~~~dg~i~~~d~~~g~~~~~~~-~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d 97 (723)
T 1xfd_A 19 DPEAKWISDTEFIYREQKGTVRLWNVETNTSTVLIE-GKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSK 97 (723)
T ss_dssp CCCCCBSSSSCBCCCCSSSCEEEBCGGGCCCEEEEC-TTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEE
T ss_pred ccccEEcCCCcEEEEeCCCCEEEEECCCCcEEEEec-cccccccccceEEECCCCCEEEEEecCccceeecceeeEEEEE
Confidence 45778999 677777778999999999998877765 4433 49999999999999999874 7788999
Q ss_pred CCCCeeeEEec---CCCccEEEEEee--CCEEEEEeCCCcEEEEECCCCCccEEEeccccCCe-----------------
Q 014934 237 ASRCKRVRTME---GHRLRVGALAWS--SSLLSSGSRDKSILQRDIRAQEDFVSKLSGHKSEV----------------- 294 (415)
Q Consensus 237 ~~~~~~~~~l~---~h~~~V~~l~~~--~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V----------------- 294 (415)
+.+++. ..+. +|...+..++|+ ++.|+.++. +.|++||+.++. .......+...+
T Consensus 98 ~~~~~~-~~l~~~~~~~~~~~~~~~SPdG~~la~~~~-~~i~~~~~~~g~-~~~~~~~~~~~~~~~g~~~~v~~ee~~~~ 174 (723)
T 1xfd_A 98 IPHGDP-QSLDPPEVSNAKLQYAGWGPKGQQLIFIFE-NNIYYCAHVGKQ-AIRVVSTGKEGVIYNGLSDWLYEEEILKT 174 (723)
T ss_dssp SSSCCC-EECCCTTCCSCCCSBCCBCSSTTCEEEEET-TEEEEESSSSSC-CEEEECCCBTTTEEEEECCHHHHHTTSSS
T ss_pred CCCCce-EeccCCccccccccccEECCCCCEEEEEEC-CeEEEEECCCCc-eEEEecCCCCCceECcccceeEEEEeccC
Confidence 998875 3333 455568889998 468888876 789999998876 344444433333
Q ss_pred -EEEEEeCCCCEEEEEeCCC----------------------------------cEEEEECCCCceeEEeccC------C
Q 014934 295 -CGLKWSYDNRELASGGNDN----------------------------------RLFVWNQHSTQPVLKYCEH------T 333 (415)
Q Consensus 295 -~~l~~spdg~~lasg~~dg----------------------------------~I~iwd~~~~~~~~~~~~h------~ 333 (415)
.+++|+|||++||+++.|+ .|++||+.+++....+..+ .
T Consensus 175 ~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~ 254 (723)
T 1xfd_A 175 HIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPPDDPRMRE 254 (723)
T ss_dssp SEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCCCCGGGSS
T ss_pred cceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEeeCCccCCCcc
Confidence 7899999999999987553 7999999988866666654 6
Q ss_pred CcEEEEEEcCCCCcEEEEEc-CCCCCeEEEEECCCCcEEEEee--CCCCE----EEEEECCCCCeEEEEEecCCC-----
Q 014934 334 AAVKAIAWSPHLHGLLASGG-GTADRCIRFWNTTTNTHLSCMD--TGSQV----CNLVWSKNVNELVSTHGYSQN----- 401 (415)
Q Consensus 334 ~~V~~l~~sp~~~~llasgg-g~~d~~I~iwd~~t~~~~~~~~--~~~~V----~~l~~s~~~~~l~s~~g~~dg----- 401 (415)
..+..++|+|+|+.+++... +..+..|++||+.++++...+. +...+ ..+.|+|+|+.|+...+..++
T Consensus 255 ~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~ 334 (723)
T 1xfd_A 255 YYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVCTKKHEDESEAWLHRQNEEPVFSKDGRKFFFIRAIPQGGRGKF 334 (723)
T ss_dssp EEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCEEEEEEEECSSCCCCCCCCCEECTTSCSEEEEEEECCSSSSCE
T ss_pred ceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCCcceEEEEeccCCEEeccCCCceEcCCCCeEEEEEecccCCCcce
Confidence 67899999999984434332 1235789999999998766543 22333 378999999988875344566
Q ss_pred -cEEEEE
Q 014934 402 -QIIVWR 407 (415)
Q Consensus 402 -~I~vw~ 407 (415)
.|.+|+
T Consensus 335 ~~l~~~d 341 (723)
T 1xfd_A 335 YHITVSS 341 (723)
T ss_dssp EEEEEEC
T ss_pred eEEEEEe
Confidence 566777
No 142
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.87 E-value=7.8e-21 Score=200.58 Aligned_cols=235 Identities=13% Similarity=0.097 Sum_probs=180.1
Q ss_pred ceeEeecCC-CcEEEEEc--CC-----eEEEEECCCCCeEEeEecCC-C----------------------CCeEEEEEc
Q 014934 169 YLNLVDWSS-HNVLAVGL--GN-----CVYLWNACSSKVTKLCDLGI-D----------------------DSVCSVGWA 217 (415)
Q Consensus 169 ~i~~l~ws~-~~~la~~~--d~-----~V~iwd~~~~~~~~~~~~~~-~----------------------~~V~~v~~s 217 (415)
.+..++|+| ++.|+++. ++ .|++||+.+++...+..... . ..|.+++|+
T Consensus 38 ~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~S 117 (741)
T 2ecf_A 38 TLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQWS 117 (741)
T ss_dssp CCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCEEC
T ss_pred CCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeEEC
Confidence 478999999 77777764 56 89999999998877775321 1 237899999
Q ss_pred CCCCeEEEEECCCcEEEEECCCCe--eeEEecCCCccEEEEEee--CCEEEEEeCCCcEEEEECCCCCccEEEeccccCC
Q 014934 218 NRNTHLAVGTSHGKVQIWDASRCK--RVRTMEGHRLRVGALAWS--SSLLSSGSRDKSILQRDIRAQEDFVSKLSGHKSE 293 (415)
Q Consensus 218 p~g~~la~g~~dg~V~iwd~~~~~--~~~~l~~h~~~V~~l~~~--~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~ 293 (415)
|||++|++++. +.|.+||+.++. .+..+..|...+.+++|+ ++.|+.++ ++.|++||+.++. .......+...
T Consensus 118 pDg~~l~~~~~-~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~-~~~i~~~d~~~g~-~~~~~~~~~~~ 194 (741)
T 2ecf_A 118 PDAQRLLFPLG-GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIR-GRNLWVIDLASGR-QMQLTADGSTT 194 (741)
T ss_dssp TTSSEEEEEET-TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEE-TTEEEEEETTTTE-EEECCCCCCSS
T ss_pred CCCCEEEEEeC-CcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEe-CCcEEEEecCCCC-EEEeccCCccc
Confidence 99999999886 899999998873 445677788889999999 46788877 4689999998765 23333333322
Q ss_pred ----------------eEEEEEeCCCCEEEEEeCCC---------------------------------cEEEEECCC-C
Q 014934 294 ----------------VCGLKWSYDNRELASGGNDN---------------------------------RLFVWNQHS-T 323 (415)
Q Consensus 294 ----------------V~~l~~spdg~~lasg~~dg---------------------------------~I~iwd~~~-~ 323 (415)
+.+++|+|||++|++++.|+ .|++||+.+ +
T Consensus 195 ~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~~~~~ 274 (741)
T 2ecf_A 195 IGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVISPAEQA 274 (741)
T ss_dssp EEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEECSSTTC
T ss_pred eeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEECCCCC
Confidence 47899999999999987765 899999988 7
Q ss_pred ceeEEec--cCCCcEEEEEEcCCCCcEEEEEc--CCCCCeEEEEECCCCcEEEEeeCCC-----CEEEEEECCCCCeEEE
Q 014934 324 QPVLKYC--EHTAAVKAIAWSPHLHGLLASGG--GTADRCIRFWNTTTNTHLSCMDTGS-----QVCNLVWSKNVNELVS 394 (415)
Q Consensus 324 ~~~~~~~--~h~~~V~~l~~sp~~~~llasgg--g~~d~~I~iwd~~t~~~~~~~~~~~-----~V~~l~~s~~~~~l~s 394 (415)
+...... .|...+..++| |+|+.|++++. +..+..|++||+.+++....+.... .+..+.|+|+|+.+++
T Consensus 275 ~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~ 353 (741)
T 2ecf_A 275 QTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHETSPTWVPLHNSLRFLDDGSILWS 353 (741)
T ss_dssp CCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEEECSSCCCCCSCCEECTTSCEEEE
T ss_pred ceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEEEEEcCCCCcCCcCCceEECCCCeEEEE
Confidence 7654432 47788999999 99997766542 2246789999999998776664322 3468999999997666
Q ss_pred EEecCCCcEEEEECC
Q 014934 395 THGYSQNQIIVWRYP 409 (415)
Q Consensus 395 ~~g~~dg~I~vw~~~ 409 (415)
+..+|.+.||.+.
T Consensus 354 --~~~~g~~~l~~~~ 366 (741)
T 2ecf_A 354 --SERTGFQHLYRID 366 (741)
T ss_dssp --ECTTSSCEEEEEC
T ss_pred --ecCCCccEEEEEc
Confidence 5678888888765
No 143
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.87 E-value=2.8e-20 Score=195.36 Aligned_cols=240 Identities=13% Similarity=0.106 Sum_probs=184.1
Q ss_pred eeEeecCC-CcEEEEEcCCeEEEEECCC-----CCeEEeEecCCCC-------------CeEEEEEcCCCCeEEEEE---
Q 014934 170 LNLVDWSS-HNVLAVGLGNCVYLWNACS-----SKVTKLCDLGIDD-------------SVCSVGWANRNTHLAVGT--- 227 (415)
Q Consensus 170 i~~l~ws~-~~~la~~~d~~V~iwd~~~-----~~~~~~~~~~~~~-------------~V~~v~~sp~g~~la~g~--- 227 (415)
+..++||| ++.|+++.++.|++|++.+ ++...+...++.. .+.++.|+|||++|++++
T Consensus 123 ~~~~~~SpdG~~la~~~~~~i~v~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~ 202 (706)
T 2z3z_A 123 TASLDFSPVGDRVAYVRNHNLYIARGGKLGEGMSRAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQ 202 (706)
T ss_dssp CTTCEECTTSSEEEEEETTEEEEEECBCTTSCCCCCEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEEC
T ss_pred ccCCcCCCCCCEEEEEECCeEEEEecCcccccCCCcEEeccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECC
Confidence 56789999 7888888899999999998 8776655422221 148999999999999987
Q ss_pred ------------------------------CCCcEEEEECCCCeeeEEec--CCCccEEEEEee--CCEEEEEeCCC---
Q 014934 228 ------------------------------SHGKVQIWDASRCKRVRTME--GHRLRVGALAWS--SSLLSSGSRDK--- 270 (415)
Q Consensus 228 ------------------------------~dg~V~iwd~~~~~~~~~l~--~h~~~V~~l~~~--~~~l~sgs~dg--- 270 (415)
.++.|.+||+.+++...... .|...+.+++|+ ++.|++++.++
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~ 282 (706)
T 2z3z_A 203 SMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQN 282 (706)
T ss_dssp TTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEEECTTSC
T ss_pred CCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccCCCCceeEeeEEEECCCCEEEEEEeCCCCC
Confidence 44679999999887654442 467789999998 46788877775
Q ss_pred --cEEEEECCCCCccEEEec-cccC---CeEEEEEeC--CCCEEEEEeCCCcEEEEECC-CCceeEEeccCCCcEEE-EE
Q 014934 271 --SILQRDIRAQEDFVSKLS-GHKS---EVCGLKWSY--DNRELASGGNDNRLFVWNQH-STQPVLKYCEHTAAVKA-IA 340 (415)
Q Consensus 271 --~I~iwd~~~~~~~~~~~~-~h~~---~V~~l~~sp--dg~~lasg~~dg~I~iwd~~-~~~~~~~~~~h~~~V~~-l~ 340 (415)
.|++||+.++........ .+.. .+.+++|+| ||++|++++.|+.+.||++. ++..+..+..|...+.. ++
T Consensus 283 ~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~dg~~l~~~~~~g~~~l~~~~~~~~~~~~l~~~~~~v~~~~~ 362 (706)
T 2z3z_A 283 ECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLPGSNNQFIWQSRRDGWNHLYLYDTTGRLIRQVTKGEWEVTNFAG 362 (706)
T ss_dssp EEEEEEEETTTCCEEEEEEEEECSSCCCCCSCCEECTTCSSEEEEEECTTSSCEEEEEETTSCEEEECCCSSSCEEEEEE
T ss_pred eeEEEEEECCCCceeeEEEEccCCCeECccCCceeecCCCCEEEEEEccCCccEEEEEECCCCEEEecCCCCeEEEeeeE
Confidence 899999998732222222 2222 246789999 99999999999999999876 66777788888888877 79
Q ss_pred EcCCCCcEEEEEcCCCCC----eEEEEECCCCcEEEEeeCCCCEEEEEECCCCCeEEEEEecCC--CcEEEEECCCCc
Q 014934 341 WSPHLHGLLASGGGTADR----CIRFWNTTTNTHLSCMDTGSQVCNLVWSKNVNELVSTHGYSQ--NQIIVWRYPTMS 412 (415)
Q Consensus 341 ~sp~~~~llasggg~~d~----~I~iwd~~t~~~~~~~~~~~~V~~l~~s~~~~~l~s~~g~~d--g~I~vw~~~s~~ 412 (415)
|+|+++.+++++. .++ .|..||+.+++ +..+.+...+..++|+|+|++|+.+....+ +.|.+||..+.+
T Consensus 363 ~spdg~~l~~~~~--~~~~~~~~l~~~d~~~~~-~~~l~~~~~~~~~~~spdg~~l~~~~~~~~~p~~i~l~d~~~~~ 437 (706)
T 2z3z_A 363 FDPKGTRLYFEST--EASPLERHFYCIDIKGGK-TKDLTPESGMHRTQLSPDGSAIIDIFQSPTVPRKVTVTNIGKGS 437 (706)
T ss_dssp ECTTSSEEEEEES--SSCTTCBEEEEEETTCCC-CEESCCSSSEEEEEECTTSSEEEEEEECSSCSCEEEEEESSSCE
T ss_pred EcCCCCEEEEEec--CCCCceEEEEEEEcCCCC-ceeccCCCceEEEEECCCCCEEEEEecCCCCCcEEEEEECCCCe
Confidence 9999997877775 444 78888888876 455556777999999999999988533222 579999987754
No 144
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.86 E-value=5.3e-20 Score=174.67 Aligned_cols=220 Identities=12% Similarity=0.141 Sum_probs=161.8
Q ss_pred cCCeEEEEECC-CCCeEEeEecCCCCCeEEEEEcCCCCeEEEEECC-CcEEEEECC--CCe--eeEEecCCCccEEEEEe
Q 014934 185 LGNCVYLWNAC-SSKVTKLCDLGIDDSVCSVGWANRNTHLAVGTSH-GKVQIWDAS--RCK--RVRTMEGHRLRVGALAW 258 (415)
Q Consensus 185 ~d~~V~iwd~~-~~~~~~~~~~~~~~~V~~v~~sp~g~~la~g~~d-g~V~iwd~~--~~~--~~~~l~~h~~~V~~l~~ 258 (415)
.++.|++|++. +++........+...+.+++|+|+|++|++++.+ +.|.+|++. +++ .+..+..+. .+..++|
T Consensus 13 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 91 (343)
T 1ri6_A 13 ESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPG-SLTHIST 91 (343)
T ss_dssp GGTEEEEEEECTTSCEEEEEEEECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSS-CCSEEEE
T ss_pred CCCeEEEEEECCCCcEEEeeeEecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeeccccccCC-CCcEEEE
Confidence 57999999985 4444434334567789999999999999998886 999999997 444 444555443 7888999
Q ss_pred e--CCEEEEEe-CCCcEEEEECCCCC--ccEEEeccccCCeEEEEEeCCCCEEEEEe-CCCcEEEEECCC-CceeE----
Q 014934 259 S--SSLLSSGS-RDKSILQRDIRAQE--DFVSKLSGHKSEVCGLKWSYDNRELASGG-NDNRLFVWNQHS-TQPVL---- 327 (415)
Q Consensus 259 ~--~~~l~sgs-~dg~I~iwd~~~~~--~~~~~~~~h~~~V~~l~~spdg~~lasg~-~dg~I~iwd~~~-~~~~~---- 327 (415)
+ +++|++++ .++.|.+||+..+. .....+.. ...+.+++|+|++++|++++ .++.|.+||+.+ ++...
T Consensus 92 s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~ 170 (343)
T 1ri6_A 92 DHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEG-LDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPA 170 (343)
T ss_dssp CTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEECC-CTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEE
T ss_pred cCCCCEEEEEecCCCeEEEEECCCCccccccccccC-CCCceEEEECCCCCEEEEecCCCCEEEEEEecCCCceeeeccc
Confidence 8 45665555 58899999995221 12333333 34688999999999888877 899999999987 54432
Q ss_pred Eecc-CCCcEEEEEEcCCCCcEEEEEcCCCCCeEEEEECCC--CcE--EEEee---C----CCCEEEEEECCCCCeEEEE
Q 014934 328 KYCE-HTAAVKAIAWSPHLHGLLASGGGTADRCIRFWNTTT--NTH--LSCMD---T----GSQVCNLVWSKNVNELVST 395 (415)
Q Consensus 328 ~~~~-h~~~V~~l~~sp~~~~llasggg~~d~~I~iwd~~t--~~~--~~~~~---~----~~~V~~l~~s~~~~~l~s~ 395 (415)
.+.. ....+..++|+|+++.+++++. .++.|.+|++.. ++. +..+. . ...+..++|+|++++|+++
T Consensus 171 ~~~~~~~~~~~~~~~~pdg~~l~~~~~--~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~ 248 (343)
T 1ri6_A 171 EVTTVEGAGPRHMVFHPNEQYAYCVNE--LNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYAC 248 (343)
T ss_dssp EEECSTTCCEEEEEECTTSSEEEEEET--TTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEE
T ss_pred ccccCCCCCcceEEECCCCCEEEEEeC--CCCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCCCCEEEEE
Confidence 2222 3457889999999997878775 689999999953 443 22332 1 2357789999999988865
Q ss_pred EecCCCcEEEEECC
Q 014934 396 HGYSQNQIIVWRYP 409 (415)
Q Consensus 396 ~g~~dg~I~vw~~~ 409 (415)
+..++.|.+|++.
T Consensus 249 -~~~~~~i~v~d~~ 261 (343)
T 1ri6_A 249 -DRTASLITVFSVS 261 (343)
T ss_dssp -ETTTTEEEEEEEC
T ss_pred -ecCCCEEEEEEEc
Confidence 4578999999997
No 145
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.86 E-value=7.3e-21 Score=189.03 Aligned_cols=212 Identities=17% Similarity=0.211 Sum_probs=161.9
Q ss_pred CCeEEEEECCCCCeEEeEecCCCCCeEEEEEcCCCCeEEEEECCCcEEEEECCCC----------eeeEE-----ecCCC
Q 014934 186 GNCVYLWNACSSKVTKLCDLGIDDSVCSVGWANRNTHLAVGTSHGKVQIWDASRC----------KRVRT-----MEGHR 250 (415)
Q Consensus 186 d~~V~iwd~~~~~~~~~~~~~~~~~V~~v~~sp~g~~la~g~~dg~V~iwd~~~~----------~~~~~-----l~~h~ 250 (415)
.+.|++|+... . .....+..+++++++.++++|+.+| |++|+.... ..+.. ...+.
T Consensus 22 ~~~vri~~~~~-~-------~~~~~~n~lavs~~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (434)
T 2oit_A 22 LKKVRIFDSPE-E-------LPKERSSLLAVSNKYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMK 92 (434)
T ss_dssp CCEEECSCCCS-S-------CCCSCCBCEEEETTTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCS
T ss_pred eeeEEecCCcc-c-------cCCCCccEEEEecCCCEEEEECCCE-EEEEEchHhhhhcccccCcccccccCccccccCC
Confidence 36788886531 1 1235689999999999999999988 899875311 01111 11356
Q ss_pred ccEEEEEee--CCEEE----EEeCCCcEEEEECCCC-----Cc-----cEEEeccccCCeEEEEEeCC-CCEEEEEeCCC
Q 014934 251 LRVGALAWS--SSLLS----SGSRDKSILQRDIRAQ-----ED-----FVSKLSGHKSEVCGLKWSYD-NRELASGGNDN 313 (415)
Q Consensus 251 ~~V~~l~~~--~~~l~----sgs~dg~I~iwd~~~~-----~~-----~~~~~~~h~~~V~~l~~spd-g~~lasg~~dg 313 (415)
..|.+++|+ +++|+ +|+.|+.|++||+++. .. ....+.+|...|.+++|+|+ +.+||+|+.||
T Consensus 93 ~~v~~l~~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg 172 (434)
T 2oit_A 93 FPIHHLALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADG 172 (434)
T ss_dssp SCEEEEEECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTS
T ss_pred CcccEEEEcCCCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCC
Confidence 789999999 57888 7889999999998754 11 14556689999999999997 89999999999
Q ss_pred cEEEEECCCCceeEEeccCCCcEEEEEEcCCCCcEEEEEcCCCCCeEEEEECCCCcEEEEeeC--------CCCEEEEEE
Q 014934 314 RLFVWNQHSTQPVLKYCEHTAAVKAIAWSPHLHGLLASGGGTADRCIRFWNTTTNTHLSCMDT--------GSQVCNLVW 385 (415)
Q Consensus 314 ~I~iwd~~~~~~~~~~~~h~~~V~~l~~sp~~~~llasggg~~d~~I~iwd~~t~~~~~~~~~--------~~~V~~l~~ 385 (415)
.|++||++++..+....+|...|.+++|+|+|. .|++|+ .|+.|++||++ ++....+.. ...|.++.|
T Consensus 173 ~v~iwD~~~~~~~~~~~~~~~~v~~v~wspdg~-~lasgs--~dg~v~iwd~~-~~~~~~~~~~~~~~~~~~~~v~~v~w 248 (434)
T 2oit_A 173 SIAVLQVTETVKVCATLPSTVAVTSVCWSPKGK-QLAVGK--QNGTVVQYLPT-LQEKKVIPCPPFYESDHPVRVLDVLW 248 (434)
T ss_dssp CEEEEEESSSEEEEEEECGGGCEEEEEECTTSS-CEEEEE--TTSCEEEECTT-CCEEEEECCCTTCCTTSCEEEEEEEE
T ss_pred eEEEEEcCCCcceeeccCCCCceeEEEEcCCCC-EEEEEc--CCCcEEEEccC-CcccccccCCcccCCCCceeEEEEEE
Confidence 999999999877777778999999999999987 555665 79999999998 665555531 127899999
Q ss_pred CCCCCeEEEEEecCCC------cEEEEECCCC
Q 014934 386 SKNVNELVSTHGYSQN------QIIVWRYPTM 411 (415)
Q Consensus 386 s~~~~~l~s~~g~~dg------~I~vw~~~s~ 411 (415)
++++.++++.. ..+| .+++|+++..
T Consensus 249 ~~~~~~l~~~~-~~dg~~~~~~~v~i~~l~~~ 279 (434)
T 2oit_A 249 IGTYVFAIVYA-AADGTLETSPDVVMALLPKK 279 (434)
T ss_dssp EETTEEEEEEE-ETTCCSSSCCEEEEEECCCT
T ss_pred ecCceEEEEEc-cCCCccCCCCceEEEEeccC
Confidence 99988876653 3343 3899999864
No 146
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.86 E-value=2.7e-19 Score=171.30 Aligned_cols=237 Identities=11% Similarity=0.056 Sum_probs=167.7
Q ss_pred eeEeecCC-CcEEEEEc---CCeEEEEECCCCCeEEeEec-CCCCCeEEEEEcCCCCeEEEEE-CCCcEEEEECCC---C
Q 014934 170 LNLVDWSS-HNVLAVGL---GNCVYLWNACSSKVTKLCDL-GIDDSVCSVGWANRNTHLAVGT-SHGKVQIWDASR---C 240 (415)
Q Consensus 170 i~~l~ws~-~~~la~~~---d~~V~iwd~~~~~~~~~~~~-~~~~~V~~v~~sp~g~~la~g~-~dg~V~iwd~~~---~ 240 (415)
...++|+| +++++++. ++.|++|++.+++...+..+ .+...+..++|+|+|++|++++ .++.|.+|++.. .
T Consensus 42 p~~~a~spdg~l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~spdg~~l~~~~~~~~~v~v~~~~~~g~~ 121 (347)
T 3hfq_A 42 PTYLALSAKDCLYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAVDEARQLVYSANYHKGTAEVMKIAADGAL 121 (347)
T ss_dssp CCCEEECTTCEEEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCCSEEEEETTTTEEEEEETTTTEEEEEEECTTSCE
T ss_pred cceEEEccCCeEEEEEecCCCceEEEEEecCCcEEEeeeeecCCCCCEEEEECCCCCEEEEEeCCCCEEEEEEeCCCCCe
Confidence 45688999 55555554 47899999987765444331 3467789999999999998888 678999999963 2
Q ss_pred eeeEEecC---------CCccEEEEEee--CCEEEEEeCCCcEEEEECCCCCccE--EEecc-ccCCeEEEEEeCCCCEE
Q 014934 241 KRVRTMEG---------HRLRVGALAWS--SSLLSSGSRDKSILQRDIRAQEDFV--SKLSG-HKSEVCGLKWSYDNREL 306 (415)
Q Consensus 241 ~~~~~l~~---------h~~~V~~l~~~--~~~l~sgs~dg~I~iwd~~~~~~~~--~~~~~-h~~~V~~l~~spdg~~l 306 (415)
+.+..+.. +...+.+++|+ ++++++...++.|.+||+....... ..+.. ....+..++|+|||++|
T Consensus 122 ~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l 201 (347)
T 3hfq_A 122 TLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYA 201 (347)
T ss_dssp EEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEEEECTTSCEEEEEEEECCTTCCEEEEEECTTSSEE
T ss_pred eecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEEEEECCCCcEEEeeeEEcCCCCCCceEEECCCCCEE
Confidence 33333321 12348889998 4666666678899999998332222 11222 23467889999999966
Q ss_pred EE-EeCCCcEEEEECCC--Cce--eEEeccCC------CcEEEEEEcCCCCcEEEEEcCCCCCeEEEEECCC-C--cEEE
Q 014934 307 AS-GGNDNRLFVWNQHS--TQP--VLKYCEHT------AAVKAIAWSPHLHGLLASGGGTADRCIRFWNTTT-N--THLS 372 (415)
Q Consensus 307 as-g~~dg~I~iwd~~~--~~~--~~~~~~h~------~~V~~l~~sp~~~~llasggg~~d~~I~iwd~~t-~--~~~~ 372 (415)
++ +..++.|.+|++.. ++. +..+.... ..+..++|+|+|++++++.. .++.|.+|++.. + +.+.
T Consensus 202 ~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~--~~~~v~v~~~~~~g~~~~~~ 279 (347)
T 3hfq_A 202 FLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNR--GYNTLAVFAVTADGHLTLIQ 279 (347)
T ss_dssp EEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEE--TTTEEEEEEECGGGCEEEEE
T ss_pred EEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeC--CCCEEEEEEECCCCcEEEeE
Confidence 65 56788999999874 432 23333222 45889999999998877775 689999999973 2 4455
Q ss_pred EeeC-CCCEEEEEECCCCCeEEEEEecCCCcEEEEECC
Q 014934 373 CMDT-GSQVCNLVWSKNVNELVSTHGYSQNQIIVWRYP 409 (415)
Q Consensus 373 ~~~~-~~~V~~l~~s~~~~~l~s~~g~~dg~I~vw~~~ 409 (415)
.+.. +..+..++|+|+|++|+++ +..++.|.+|++.
T Consensus 280 ~~~~~~~~~~~~~~spdg~~l~v~-~~~~~~v~v~~~d 316 (347)
T 3hfq_A 280 QISTEGDFPRDFDLDPTEAFVVVV-NQNTDNATLYARD 316 (347)
T ss_dssp EEECSSSCCCEEEECTTSSEEEEE-ETTTTEEEEEEEC
T ss_pred EEecCCCCcCeEEECCCCCEEEEE-EcCCCcEEEEEEe
Confidence 5544 5668899999999998885 4456899999553
No 147
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.84 E-value=1e-19 Score=191.10 Aligned_cols=236 Identities=11% Similarity=0.081 Sum_probs=177.1
Q ss_pred cceeEeecCCCcEEEEEcCCeEEEEECCCCCeEEeEecCCCCCeEEEEEcCCCCeEEEEECCCcEEEEECCC-----Cee
Q 014934 168 FYLNLVDWSSHNVLAVGLGNCVYLWNACSSKVTKLCDLGIDDSVCSVGWANRNTHLAVGTSHGKVQIWDASR-----CKR 242 (415)
Q Consensus 168 ~~i~~l~ws~~~~la~~~d~~V~iwd~~~~~~~~~~~~~~~~~V~~v~~sp~g~~la~g~~dg~V~iwd~~~-----~~~ 242 (415)
..+..++|+|+..++++.++.|++||+.+++...+. .+...+.+++|+|||++||++ .++.|.+||+.+ ++.
T Consensus 82 ~~v~~~~~spd~~~~~~~~~~i~~~d~~~~~~~~l~--~~~~~~~~~~~SpdG~~la~~-~~~~i~v~~~~~~~~~~g~~ 158 (706)
T 2z3z_A 82 FPSFRTLDAGRGLVVLFTQGGLVGFDMLARKVTYLF--DTNEETASLDFSPVGDRVAYV-RNHNLYIARGGKLGEGMSRA 158 (706)
T ss_dssp CCCEEEEETTTTEEEEEETTEEEEEETTTTEEEEEE--CCTTCCTTCEECTTSSEEEEE-ETTEEEEEECBCTTSCCCCC
T ss_pred cCceeEEECCCCeEEEEECCEEEEEECCCCceEEcc--CCcccccCCcCCCCCCEEEEE-ECCeEEEEecCcccccCCCc
Confidence 458899999987777778899999999998876655 456778999999999999985 679999999988 776
Q ss_pred eEEecCCCcc--------------EEEEEee--CCEEEEEe---------------------------------CCCcEE
Q 014934 243 VRTMEGHRLR--------------VGALAWS--SSLLSSGS---------------------------------RDKSIL 273 (415)
Q Consensus 243 ~~~l~~h~~~--------------V~~l~~~--~~~l~sgs---------------------------------~dg~I~ 273 (415)
......+... +.+++|+ ++.|++++ .+..|+
T Consensus 159 ~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~ 238 (706)
T 2z3z_A 159 IAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVG 238 (706)
T ss_dssp EESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEE
T ss_pred EEeccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEE
Confidence 6544444443 4789998 57888887 446799
Q ss_pred EEECCCCCccEEEe--ccccCCeEEEEEeCCCCEEEEEeCCC-----cEEEEECCCCceeEEec--cCCC---cEEEEEE
Q 014934 274 QRDIRAQEDFVSKL--SGHKSEVCGLKWSYDNRELASGGNDN-----RLFVWNQHSTQPVLKYC--EHTA---AVKAIAW 341 (415)
Q Consensus 274 iwd~~~~~~~~~~~--~~h~~~V~~l~~spdg~~lasg~~dg-----~I~iwd~~~~~~~~~~~--~h~~---~V~~l~~ 341 (415)
+||+.++.. .... ..|...+.+++|+|||++|++++.++ .|++||+.+++....+. .+.. .+..++|
T Consensus 239 ~~d~~~~~~-~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~ 317 (706)
T 2z3z_A 239 IYHLATGKT-VYLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTF 317 (706)
T ss_dssp EEETTTTEE-EECCCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSCCEE
T ss_pred EEECCCCce-EeeccCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCCcee
Confidence 999987762 2222 24667799999999999999987765 89999999984333332 2222 2467899
Q ss_pred cC--CCCcEEEEEcCCCCCeEEEEECC-CCcEEEEee-CCCCEEE-EEECCCCCeEEEEEecCCC----cEEEEECCCC
Q 014934 342 SP--HLHGLLASGGGTADRCIRFWNTT-TNTHLSCMD-TGSQVCN-LVWSKNVNELVSTHGYSQN----QIIVWRYPTM 411 (415)
Q Consensus 342 sp--~~~~llasggg~~d~~I~iwd~~-t~~~~~~~~-~~~~V~~-l~~s~~~~~l~s~~g~~dg----~I~vw~~~s~ 411 (415)
+| +|+ ++++++ .|+.+++|.+. ++..+..+. +...+.. +.|+|+++.|+.+ +..++ .|..|+..+.
T Consensus 318 sp~~dg~-~l~~~~--~~g~~~l~~~~~~~~~~~~l~~~~~~v~~~~~~spdg~~l~~~-~~~~~~~~~~l~~~d~~~~ 392 (706)
T 2z3z_A 318 LPGSNNQ-FIWQSR--RDGWNHLYLYDTTGRLIRQVTKGEWEVTNFAGFDPKGTRLYFE-STEASPLERHFYCIDIKGG 392 (706)
T ss_dssp CTTCSSE-EEEEEC--TTSSCEEEEEETTSCEEEECCCSSSCEEEEEEECTTSSEEEEE-ESSSCTTCBEEEEEETTCC
T ss_pred ecCCCCE-EEEEEc--cCCccEEEEEECCCCEEEecCCCCeEEEeeeEEcCCCCEEEEE-ecCCCCceEEEEEEEcCCC
Confidence 99 987 666665 78889999876 566666664 3455766 8999999998875 34444 6777776654
No 148
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.84 E-value=1.3e-19 Score=191.15 Aligned_cols=232 Identities=11% Similarity=0.088 Sum_probs=177.2
Q ss_pred ceeEeecCC-CcEEEEEcCCeEEEEECCCC---CeEEeEecCCCCCeEEEEEcCCCCeEEEEECCCcEEEEECCCCeeeE
Q 014934 169 YLNLVDWSS-HNVLAVGLGNCVYLWNACSS---KVTKLCDLGIDDSVCSVGWANRNTHLAVGTSHGKVQIWDASRCKRVR 244 (415)
Q Consensus 169 ~i~~l~ws~-~~~la~~~d~~V~iwd~~~~---~~~~~~~~~~~~~V~~v~~sp~g~~la~g~~dg~V~iwd~~~~~~~~ 244 (415)
.+..++||| ++.|+++.++.|++||+.++ +...+. .+...+.+++|+|||++||+++ ++.|.+||+.+++...
T Consensus 110 ~v~~~~~SpDg~~l~~~~~~~i~~~d~~~~~~~~~~~l~--~~~~~~~~~~~SPDG~~la~~~-~~~i~~~d~~~g~~~~ 186 (741)
T 2ecf_A 110 GIVDYQWSPDAQRLLFPLGGELYLYDLKQEGKAAVRQLT--HGEGFATDAKLSPKGGFVSFIR-GRNLWVIDLASGRQMQ 186 (741)
T ss_dssp ESCCCEECTTSSEEEEEETTEEEEEESSSCSTTSCCBCC--CSSSCEEEEEECTTSSEEEEEE-TTEEEEEETTTTEEEE
T ss_pred CcceeEECCCCCEEEEEeCCcEEEEECCCCCcceEEEcc--cCCcccccccCCCCCCEEEEEe-CCcEEEEecCCCCEEE
Confidence 467889999 78888888899999999988 655443 5667899999999999999987 4689999999887766
Q ss_pred EecCCCcc----------------EEEEEee--CCEEEEEeCCC---------------------------------cEE
Q 014934 245 TMEGHRLR----------------VGALAWS--SSLLSSGSRDK---------------------------------SIL 273 (415)
Q Consensus 245 ~l~~h~~~----------------V~~l~~~--~~~l~sgs~dg---------------------------------~I~ 273 (415)
....+... +.+++|+ ++.|++++.|+ .|+
T Consensus 187 ~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~ 266 (741)
T 2ecf_A 187 LTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLG 266 (741)
T ss_dssp CCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEE
T ss_pred eccCCccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEE
Confidence 55544432 3678998 56788887665 789
Q ss_pred EEECCC-CCccEEEec--cccCCeEEEEEeCCCCEEEEEeC-----CCcEEEEECCCCceeEEeccCCC----cEEEEEE
Q 014934 274 QRDIRA-QEDFVSKLS--GHKSEVCGLKWSYDNRELASGGN-----DNRLFVWNQHSTQPVLKYCEHTA----AVKAIAW 341 (415)
Q Consensus 274 iwd~~~-~~~~~~~~~--~h~~~V~~l~~spdg~~lasg~~-----dg~I~iwd~~~~~~~~~~~~h~~----~V~~l~~ 341 (415)
+||+.+ +. ...... .|...+..++| |||++|++++. +..|++||+.+++....+..+.. .+..++|
T Consensus 267 ~~d~~~~~~-~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~ 344 (741)
T 2ecf_A 267 VISPAEQAQ-TQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHETSPTWVPLHNSLRF 344 (741)
T ss_dssp EECSSTTCC-CEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEEECSSCCCCCSCCEE
T ss_pred EEECCCCCc-eEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEEEEEcCCCCcCCcCCceEE
Confidence 999987 65 333322 47778999999 99999997653 56899999999987776665543 4568999
Q ss_pred cCCCCcEEEEEcCCCCCeEEEEECC-CCcEEEEee-CCCCEEEE-EECCCCCeEEEEEecCCC--cEEEEECCC
Q 014934 342 SPHLHGLLASGGGTADRCIRFWNTT-TNTHLSCMD-TGSQVCNL-VWSKNVNELVSTHGYSQN--QIIVWRYPT 410 (415)
Q Consensus 342 sp~~~~llasggg~~d~~I~iwd~~-t~~~~~~~~-~~~~V~~l-~~s~~~~~l~s~~g~~dg--~I~vw~~~s 410 (415)
+|+|+ ++++++ .|+.+++|.+. ++. +..+. +...|..+ .|+|+++.|+.+ +..++ .++||++..
T Consensus 345 spdg~-~~~~~~--~~g~~~l~~~~~~~~-~~~l~~~~~~v~~~~~~s~dg~~l~~~-~~~~~~~~~~l~~~~~ 413 (741)
T 2ecf_A 345 LDDGS-ILWSSE--RTGFQHLYRIDSKGK-AAALTHGNWSVDELLAVDEKAGLAYFR-AGIESARESQIYAVPL 413 (741)
T ss_dssp CTTSC-EEEEEC--TTSSCEEEEECSSSC-EEESCCSSSCEEEEEEEETTTTEEEEE-ECSSCTTCBEEEEEET
T ss_pred CCCCe-EEEEec--CCCccEEEEEcCCCC-eeeeeecceEEEeEeEEeCCCCEEEEE-EeCCCCceEEEEEEEc
Confidence 99998 777776 78877777664 344 55443 45668777 599999988765 44555 899998753
No 149
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.83 E-value=2.4e-19 Score=196.75 Aligned_cols=233 Identities=11% Similarity=0.069 Sum_probs=185.2
Q ss_pred eeEeecCC-CcEEEEEcCCeEEEEECCCCCeEEeEecC----------CCCCeEEEEEc-CCCCeEEEEECCCcEEEEEC
Q 014934 170 LNLVDWSS-HNVLAVGLGNCVYLWNACSSKVTKLCDLG----------IDDSVCSVGWA-NRNTHLAVGTSHGKVQIWDA 237 (415)
Q Consensus 170 i~~l~ws~-~~~la~~~d~~V~iwd~~~~~~~~~~~~~----------~~~~V~~v~~s-p~g~~la~g~~dg~V~iwd~ 237 (415)
+..++|+| ++.|+++.++.|++|+.....+. .+... |...+.+++|+ |+|++||+++ ++.|.+|++
T Consensus 247 ~~~~~~SpDG~~la~~~~~~i~~~d~~~~~l~-~l~~~~~~~~~~~~~~~~~v~~~~~S~pdG~~la~~~-~~~i~~~~~ 324 (1045)
T 1k32_A 247 YYPRHLNTDGRRILFSKGGSIYIFNPDTEKIE-KIEIGDLESPEDRIISIPSKFAEDFSPLDGDLIAFVS-RGQAFIQDV 324 (1045)
T ss_dssp SCEEEEEESSSCEEEEETTEEEEECTTTCCEE-ECCCCCCCBCCSEEEECGGGGEEEEEECGGGCEEEEE-TTEEEEECT
T ss_pred cceeeEcCCCCEEEEEeCCEEEEecCCceEee-eeccCcccccccccccccccceeeecCCCCCEEEEEE-cCEEEEEcC
Confidence 34668998 77888888999999999655544 22110 23368999999 9999999987 789999999
Q ss_pred CCCeeeEEecCCCc-cEEEEEee-CCEEEEEeCCCcEE-EEECCCCCccEEEeccccCCeEEEEEeCCCCEEEEEeCCCc
Q 014934 238 SRCKRVRTMEGHRL-RVGALAWS-SSLLSSGSRDKSIL-QRDIRAQEDFVSKLSGHKSEVCGLKWSYDNRELASGGNDNR 314 (415)
Q Consensus 238 ~~~~~~~~l~~h~~-~V~~l~~~-~~~l~sgs~dg~I~-iwd~~~~~~~~~~~~~h~~~V~~l~~spdg~~lasg~~dg~ 314 (415)
..++.. .+..|.. .+..++|+ +..|+.++.++.|. +||+..+. ...+.+|...+..++|+|||++||+++.++.
T Consensus 325 ~~~~~~-~~~~~~~~~~~~~~~sdg~~l~~~s~~~~l~~~~d~~~~~--~~~l~~~~~~~~~~~~SpDG~~la~~~~~~~ 401 (1045)
T 1k32_A 325 SGTYVL-KVPEPLRIRYVRRGGDTKVAFIHGTREGDFLGIYDYRTGK--AEKFEENLGNVFAMGVDRNGKFAVVANDRFE 401 (1045)
T ss_dssp TSSBEE-ECSCCSCEEEEEECSSSEEEEEEEETTEEEEEEEETTTCC--EEECCCCCCSEEEEEECTTSSEEEEEETTSE
T ss_pred CCCceE-EccCCCcceEEeeeEcCCCeEEEEECCCceEEEEECCCCC--ceEecCCccceeeeEECCCCCEEEEECCCCe
Confidence 877644 4667777 89999998 45788888888898 99998765 3445578889999999999999999999999
Q ss_pred EEEEECCCCceeEEeccCCCcEEEEEEcCCCCcEEEEEcC-------CCCCeEEEEECCCCcEEEEeeCCCCEEEEEECC
Q 014934 315 LFVWNQHSTQPVLKYCEHTAAVKAIAWSPHLHGLLASGGG-------TADRCIRFWNTTTNTHLSCMDTGSQVCNLVWSK 387 (415)
Q Consensus 315 I~iwd~~~~~~~~~~~~h~~~V~~l~~sp~~~~llasggg-------~~d~~I~iwd~~t~~~~~~~~~~~~V~~l~~s~ 387 (415)
|++||+.+++....+.+|...+.+++|+|+|+++++++.. ..++.|++||+.+++......+...+..+.|+|
T Consensus 402 v~~~d~~tg~~~~~~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~~~~l~~~~~~~~~~~~sp 481 (1045)
T 1k32_A 402 IMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRKIFAATTENSHDYAPAFDA 481 (1045)
T ss_dssp EEEEETTTCCEEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTEEEECSCSSSBEEEEEECT
T ss_pred EEEEECCCCceEEeccCCCCCccceEECCCCCeEEEEecCccccccCCCCCeEEEEECCCCcEEEeeCCCcccCCceEcC
Confidence 9999999998887777899999999999999966655431 123599999999988444444667788999999
Q ss_pred CCCeEEEEEecCCCcEEEEECC
Q 014934 388 NVNELVSTHGYSQNQIIVWRYP 409 (415)
Q Consensus 388 ~~~~l~s~~g~~dg~I~vw~~~ 409 (415)
+|+.|++ ++.++...+|+..
T Consensus 482 dG~~l~~--~s~~~~~~~~~~~ 501 (1045)
T 1k32_A 482 DSKNLYY--LSYRSLDPSPDRV 501 (1045)
T ss_dssp TSCEEEE--EESCCCCCEECSS
T ss_pred CCCEEEE--EecccCCcCcchh
Confidence 9999998 4566677777654
No 150
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.83 E-value=2.7e-19 Score=188.15 Aligned_cols=237 Identities=11% Similarity=0.061 Sum_probs=172.9
Q ss_pred ceeEeecCC-CcEEEEEcC----------CeEEEEECCCCCeEEeEec-CCCCCeEEEEEcCCCCeEEEEECCCcEEEEE
Q 014934 169 YLNLVDWSS-HNVLAVGLG----------NCVYLWNACSSKVTKLCDL-GIDDSVCSVGWANRNTHLAVGTSHGKVQIWD 236 (415)
Q Consensus 169 ~i~~l~ws~-~~~la~~~d----------~~V~iwd~~~~~~~~~~~~-~~~~~V~~v~~sp~g~~la~g~~dg~V~iwd 236 (415)
.+..++||| ++.|+++.+ +.|++||+.+++...+... .+...+.+++|+|||++||+++. +.|.+||
T Consensus 62 ~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~SPdG~~la~~~~-~~i~~~~ 140 (723)
T 1xfd_A 62 RAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQSLDPPEVSNAKLQYAGWGPKGQQLIFIFE-NNIYYCA 140 (723)
T ss_dssp TCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCCEECCCTTCCSCCCSBCCBCSSTTCEEEEET-TEEEEES
T ss_pred ccceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCceEeccCCccccccccccEECCCCCEEEEEEC-CeEEEEE
Confidence 478999999 777777753 6899999999887444322 33445899999999999999886 7999999
Q ss_pred CCCCeeeEEecCCCccE------------------EEEEee--CCEEEEEeCCC--------------------------
Q 014934 237 ASRCKRVRTMEGHRLRV------------------GALAWS--SSLLSSGSRDK-------------------------- 270 (415)
Q Consensus 237 ~~~~~~~~~l~~h~~~V------------------~~l~~~--~~~l~sgs~dg-------------------------- 270 (415)
+.+++.......+...+ .+++|+ ++.|++++.|+
T Consensus 141 ~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (723)
T 1xfd_A 141 HVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPK 220 (723)
T ss_dssp SSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCB
T ss_pred CCCCceEEEecCCCCCceECcccceeEEEEeccCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCC
Confidence 99888776665544333 789998 46888877543
Q ss_pred --------cEEEEECCCCCccEEEeccc------cCCeEEEEEeCCCCEEEEEeC----CCcEEEEECCCCceeEEecc-
Q 014934 271 --------SILQRDIRAQEDFVSKLSGH------KSEVCGLKWSYDNRELASGGN----DNRLFVWNQHSTQPVLKYCE- 331 (415)
Q Consensus 271 --------~I~iwd~~~~~~~~~~~~~h------~~~V~~l~~spdg~~lasg~~----dg~I~iwd~~~~~~~~~~~~- 331 (415)
.|++||+.++. ....+..+ ...+..++|+|||++|++... +..|++||+.+++....+..
T Consensus 221 ~G~~~~~~~l~~~d~~~~~-~~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~ 299 (723)
T 1xfd_A 221 AGSENPSISLHVIGLNGPT-HDLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVCTKKHEDE 299 (723)
T ss_dssp TTSCCCEEEEEEEESSSSC-CCEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCEEEEEEEE
T ss_pred CCCCCCeeEEEEEECCCCc-eeEEeeCCccCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCCcceEEEEec
Confidence 79999998776 23444443 567899999999999877653 35799999999887665543
Q ss_pred CCCcEE----EEEEcCCCCcEEEE-EcCCCCC------eEEEEE-CCCCc--EEEEee-CCCCEEE-EEECCCCCeEEEE
Q 014934 332 HTAAVK----AIAWSPHLHGLLAS-GGGTADR------CIRFWN-TTTNT--HLSCMD-TGSQVCN-LVWSKNVNELVST 395 (415)
Q Consensus 332 h~~~V~----~l~~sp~~~~llas-ggg~~d~------~I~iwd-~~t~~--~~~~~~-~~~~V~~-l~~s~~~~~l~s~ 395 (415)
+...+. .++|+|+|+.+++. +. .++ .|.+|| ..+++ +...+. ....+.. +.|+|+|+.|+.+
T Consensus 300 ~~~~~~~~~~~~~~spdg~~l~~~~~~--~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~ 377 (723)
T 1xfd_A 300 SEAWLHRQNEEPVFSKDGRKFFFIRAI--PQGGRGKFYHITVSSSQPNSSNDNIQSITSGDWDVTKILAYDEKGNKIYFL 377 (723)
T ss_dssp CSSCCCCCCCCCEECTTSCSEEEEEEE--CCSSSSCEEEEEEECSSCCSSSCCCCBSCCSSSCEEEEEEEETTTTEEEEE
T ss_pred cCCEEeccCCCceEcCCCCeEEEEEec--ccCCCcceeEEEEEeccCCCCccceeEeecCCeEEEeeeEEcCCCCEEEEE
Confidence 334443 78999999987765 43 566 577788 44444 133343 3345655 6999999999875
Q ss_pred EecCC--CcEEEEECCC
Q 014934 396 HGYSQ--NQIIVWRYPT 410 (415)
Q Consensus 396 ~g~~d--g~I~vw~~~s 410 (415)
+..+ +.+.||++..
T Consensus 378 -~~~~~~~~~~l~~~~~ 393 (723)
T 1xfd_A 378 -STEDLPRRRQLYSANT 393 (723)
T ss_dssp -ESSSCTTCCEEEEECS
T ss_pred -EcCCCCcceEEEEEeC
Confidence 3444 7899999864
No 151
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.82 E-value=1.1e-17 Score=161.12 Aligned_cols=235 Identities=12% Similarity=0.082 Sum_probs=165.3
Q ss_pred eeEeecCC-CcEEEEEcC-----CeEEEEECCC--CCeEEeEec-CCCCCeEEEEEcCCCCeEEEEE-CCCcEEEEECCC
Q 014934 170 LNLVDWSS-HNVLAVGLG-----NCVYLWNACS--SKVTKLCDL-GIDDSVCSVGWANRNTHLAVGT-SHGKVQIWDASR 239 (415)
Q Consensus 170 i~~l~ws~-~~~la~~~d-----~~V~iwd~~~--~~~~~~~~~-~~~~~V~~v~~sp~g~~la~g~-~dg~V~iwd~~~ 239 (415)
...++|+| +++|+++.. +.|.+|++.. ++...+... .+...+..+++ +|++|+++. .++.|.+|++..
T Consensus 52 p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~--dg~~l~~~~~~~~~v~~~~~~~ 129 (361)
T 3scy_A 52 PSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTMGADPCYLTT--NGKNIVTANYSGGSITVFPIGQ 129 (361)
T ss_dssp CCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEECSSSCEEEEEE--CSSEEEEEETTTTEEEEEEBCT
T ss_pred CceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEeccCCCCcEEEEE--CCCEEEEEECCCCEEEEEEeCC
Confidence 45688999 676666644 6899987755 555444433 24557788888 888887776 578999999975
Q ss_pred CeeeEEe------cC--------CCccEEEEEee--CCEEEEE-eCCCcEEEEECCCCCc------c------EEEeccc
Q 014934 240 CKRVRTM------EG--------HRLRVGALAWS--SSLLSSG-SRDKSILQRDIRAQED------F------VSKLSGH 290 (415)
Q Consensus 240 ~~~~~~l------~~--------h~~~V~~l~~~--~~~l~sg-s~dg~I~iwd~~~~~~------~------~~~~~~h 290 (415)
...+..+ .+ +...+.+++|+ +++|+++ ..++.|.+|++..... . ......+
T Consensus 130 ~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 209 (361)
T 3scy_A 130 DGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAP 209 (361)
T ss_dssp TSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCT
T ss_pred CCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccceecCC
Confidence 4322211 11 12346889998 4555544 4588999999876542 1 1222344
Q ss_pred cCCeEEEEEeCCCCEEEEEe-CCCcEEEEECCCCce--eEEec---cCCCcEEEEEEcCCCCcEEEEEcCCC-CCeEEEE
Q 014934 291 KSEVCGLKWSYDNRELASGG-NDNRLFVWNQHSTQP--VLKYC---EHTAAVKAIAWSPHLHGLLASGGGTA-DRCIRFW 363 (415)
Q Consensus 291 ~~~V~~l~~spdg~~lasg~-~dg~I~iwd~~~~~~--~~~~~---~h~~~V~~l~~sp~~~~llasggg~~-d~~I~iw 363 (415)
...+.+++|+|||++|++++ .++.|.+||+.+++. +..+. .+...+..++|+|+|++|+++.. . ++.|.+|
T Consensus 210 ~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~--~~~~~i~v~ 287 (361)
T 3scy_A 210 GSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNR--LKADGVAIF 287 (361)
T ss_dssp TCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEEC--SSSCEEEEE
T ss_pred CCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECC--CCCCEEEEE
Confidence 56688999999999887777 689999999987744 33332 23455789999999997777764 4 6899999
Q ss_pred ECC--CCc--EEEEeeCCCCEEEEEECCCCCeEEEEEecCCCcEEEEECC
Q 014934 364 NTT--TNT--HLSCMDTGSQVCNLVWSKNVNELVSTHGYSQNQIIVWRYP 409 (415)
Q Consensus 364 d~~--t~~--~~~~~~~~~~V~~l~~s~~~~~l~s~~g~~dg~I~vw~~~ 409 (415)
++. +++ .+..+..+..+.+++|+|+|++|+++ +..++.|.+|++.
T Consensus 288 ~~~~~~g~~~~~~~~~~g~~~~~~~~spdg~~l~~~-~~~~~~v~v~~~d 336 (361)
T 3scy_A 288 KVDETNGTLTKVGYQLTGIHPRNFIITPNGKYLLVA-CRDTNVIQIFERD 336 (361)
T ss_dssp EECTTTCCEEEEEEEECSSCCCEEEECTTSCEEEEE-ETTTTEEEEEEEC
T ss_pred EEcCCCCcEEEeeEecCCCCCceEEECCCCCEEEEE-ECCCCCEEEEEEE
Confidence 985 455 44555556678899999999998885 4467899997664
No 152
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.80 E-value=1.5e-18 Score=178.29 Aligned_cols=226 Identities=11% Similarity=0.037 Sum_probs=162.1
Q ss_pred ceeEeecCC-CcEEEEE-c-CCeEEEEECCCCCeEEeEecCCCCCeEEEEEcCCCCeEEEEEC---CCcEEEEECCC---
Q 014934 169 YLNLVDWSS-HNVLAVG-L-GNCVYLWNACSSKVTKLCDLGIDDSVCSVGWANRNTHLAVGTS---HGKVQIWDASR--- 239 (415)
Q Consensus 169 ~i~~l~ws~-~~~la~~-~-d~~V~iwd~~~~~~~~~~~~~~~~~V~~v~~sp~g~~la~g~~---dg~V~iwd~~~--- 239 (415)
.+..+.|+| ++.||.+ . ++.+.||++.+++..++.. .+...+.++.|+|| ++++++.. +...+||.+..
T Consensus 23 ~~~~~~~~~DG~~la~~s~~~g~~~lw~~~~g~~~~lt~-~~~~~~~~~~~spd-~~l~~~~~~~g~~~~~l~~~~~~~~ 100 (582)
T 3o4h_A 23 EKYSLQGVVDGDKLLVVGFSEGSVNAYLYDGGETVKLNR-EPINSVLDPHYGVG-RVILVRDVSKGAEQHALFKVNTSRP 100 (582)
T ss_dssp CEEEEEEEETTTEEEEEEEETTEEEEEEEETTEEEECCS-SCCSEECEECTTCS-EEEEEEECSTTSCCEEEEEEETTST
T ss_pred chheeecCCCCCeEEEEEccCCceeEEEEcCCCcEeeec-ccccccccccCCCC-eEEEEeccCCCCcceEEEEEeccCC
Confidence 488999999 6777776 3 7899999997777655542 33368999999999 77777765 45566665533
Q ss_pred CeeeEEec-CCCccEEEEEeeCC-EEEEEeCCCcEEEEECCCCCccEEEeccccCCeEEEEEeCCCCEEEEEeCC----C
Q 014934 240 CKRVRTME-GHRLRVGALAWSSS-LLSSGSRDKSILQRDIRAQEDFVSKLSGHKSEVCGLKWSYDNRELASGGND----N 313 (415)
Q Consensus 240 ~~~~~~l~-~h~~~V~~l~~~~~-~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~spdg~~lasg~~d----g 313 (415)
+... .+. .+...+.+++++++ .+++.+.++.+.+||+.++. . ..+..+.. .+++|+|||++||+++.+ +
T Consensus 101 g~~~-~l~~~~~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~-~-~~l~~~~~--~~~~~spDG~~la~~~~~~~~~~ 175 (582)
T 3o4h_A 101 GEEQ-RLEAVKPMRILSGVDTGEAVVFTGATEDRVALYALDGGG-L-RELARLPG--FGFVSDIRGDLIAGLGFFGGGRV 175 (582)
T ss_dssp TCCE-ECTTSCSBEEEEEEECSSCEEEEEECSSCEEEEEEETTE-E-EEEEEESS--CEEEEEEETTEEEEEEEEETTEE
T ss_pred Cccc-cccCCCCceeeeeCCCCCeEEEEecCCCCceEEEccCCc-E-EEeecCCC--ceEEECCCCCEEEEEEEcCCCCe
Confidence 2322 333 22333445555553 44555555556699998775 2 33333333 789999999999988777 7
Q ss_pred cEEEEECCCCceeEEeccCCCcEEEEEEcCCCCcEEEEEcCCCCC--eEEEEECCCCcEEEEee-CCCCEEEEE------
Q 014934 314 RLFVWNQHSTQPVLKYCEHTAAVKAIAWSPHLHGLLASGGGTADR--CIRFWNTTTNTHLSCMD-TGSQVCNLV------ 384 (415)
Q Consensus 314 ~I~iwd~~~~~~~~~~~~h~~~V~~l~~sp~~~~llasggg~~d~--~I~iwd~~t~~~~~~~~-~~~~V~~l~------ 384 (415)
.|++||+.+++.. .+..|...+..++|+|+|+.|+ ++. .++ .|++||+.+++.. .+. +...+..+.
T Consensus 176 ~i~~~d~~~g~~~-~l~~~~~~~~~~~~SpDG~~l~-~~~--~~~~~~i~~~d~~~~~~~-~~~~~~~~~~~~~~~~~~~ 250 (582)
T 3o4h_A 176 SLFTSNLSSGGLR-VFDSGEGSFSSASISPGMKVTA-GLE--TAREARLVTVDPRDGSVE-DLELPSKDFSSYRPTAITW 250 (582)
T ss_dssp EEEEEETTTCCCE-EECCSSCEEEEEEECTTSCEEE-EEE--CSSCEEEEEECTTTCCEE-ECCCSCSHHHHHCCSEEEE
T ss_pred EEEEEcCCCCCce-EeecCCCccccceECCCCCEEE-Ecc--CCCeeEEEEEcCCCCcEE-EccCCCcChhhhhhccccc
Confidence 8999999888764 6778999999999999998655 554 577 8999999999877 443 334455555
Q ss_pred --ECCCCCeEEEEEecCCCcEEEEEC
Q 014934 385 --WSKNVNELVSTHGYSQNQIIVWRY 408 (415)
Q Consensus 385 --~s~~~~~l~s~~g~~dg~I~vw~~ 408 (415)
|+|||..+++ +..++.+++|++
T Consensus 251 ~~~spdg~~~~~--~~~~g~~~l~~~ 274 (582)
T 3o4h_A 251 LGYLPDGRLAVV--ARREGRSAVFID 274 (582)
T ss_dssp EEECTTSCEEEE--EEETTEEEEEET
T ss_pred eeEcCCCcEEEE--EEcCCcEEEEEE
Confidence 9999965555 567899999998
No 153
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.80 E-value=1.2e-19 Score=190.91 Aligned_cols=233 Identities=13% Similarity=0.156 Sum_probs=167.4
Q ss_pred EeecCC-CcEEEEEcCCeEEEEECCCCCeEEeEecCCCC---CeEEEEEcCCCCeEEEEEC---------CCcEEEEECC
Q 014934 172 LVDWSS-HNVLAVGLGNCVYLWNACSSKVTKLCDLGIDD---SVCSVGWANRNTHLAVGTS---------HGKVQIWDAS 238 (415)
Q Consensus 172 ~l~ws~-~~~la~~~d~~V~iwd~~~~~~~~~~~~~~~~---~V~~v~~sp~g~~la~g~~---------dg~V~iwd~~ 238 (415)
.+.|+| +.+++.+.++.|++||+.+++...+.. .+.. .+.+++|||||++||+++. ++.|++||+.
T Consensus 20 ~~~~s~dg~~~~~~~d~~i~~~~~~~g~~~~~~~-~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~ 98 (719)
T 1z68_A 20 FPNWISGQEYLHQSADNNIVLYNIETGQSYTILS-NRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLS 98 (719)
T ss_dssp CCEESSSSEEEEECTTSCEEEEESSSCCEEEEEC-HHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETT
T ss_pred ccEECCCCeEEEEcCCCCEEEEEcCCCcEEEEEc-cccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECC
Confidence 568999 666766678999999999999877764 2222 4899999999999999876 6899999999
Q ss_pred CCeee--EEecCCCccEEEEEee--CCEEEEEeCCCcEEEEECCCCCccEEE-eccccCCe-----------------EE
Q 014934 239 RCKRV--RTMEGHRLRVGALAWS--SSLLSSGSRDKSILQRDIRAQEDFVSK-LSGHKSEV-----------------CG 296 (415)
Q Consensus 239 ~~~~~--~~l~~h~~~V~~l~~~--~~~l~sgs~dg~I~iwd~~~~~~~~~~-~~~h~~~V-----------------~~ 296 (415)
+++.+ ..+ ...+..++|+ ++.|+.+. ++.|++||+.++.. ... ..++...| .+
T Consensus 99 ~g~~~~~~~l---~~~~~~~~~SPDG~~la~~~-~~~i~~~~~~~g~~-~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~ 173 (719)
T 1z68_A 99 NGEFVRGNEL---PRPIQYLCWSPVGSKLAYVY-QNNIYLKQRPGDPP-FQITFNGRENKIFNGIPDWVYEEEMLATKYA 173 (719)
T ss_dssp TTEECCSSCC---CSSBCCEEECSSTTCEEEEE-TTEEEEESSTTSCC-EECCCCCBTTTEEESSCCHHHHHHTTCSSCC
T ss_pred CCccccceec---CcccccceECCCCCEEEEEE-CCeEEEEeCCCCCc-EEEecCCCcCCeEcccccceeeeecccCccc
Confidence 88763 222 2458889998 46777775 78999999987763 222 12333322 48
Q ss_pred EEEeCCCCEEEEEeCCC----------------------------------cEEEEECCCCcee--EE------eccCCC
Q 014934 297 LKWSYDNRELASGGNDN----------------------------------RLFVWNQHSTQPV--LK------YCEHTA 334 (415)
Q Consensus 297 l~~spdg~~lasg~~dg----------------------------------~I~iwd~~~~~~~--~~------~~~h~~ 334 (415)
++|+|||++||+++.|. .|++||+.+++.. .. +.+|..
T Consensus 174 ~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~ 253 (719)
T 1z68_A 174 LWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDY 253 (719)
T ss_dssp EEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCE
T ss_pred EEECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCCCcc
Confidence 99999999999987652 7899999887653 12 335888
Q ss_pred cEEEEEEcCCCCcEEEEEcC--CCCCeEEEEE----CCCCcEEEEe-----eCCCCEE-----EEEECCCCCeEEEEEec
Q 014934 335 AVKAIAWSPHLHGLLASGGG--TADRCIRFWN----TTTNTHLSCM-----DTGSQVC-----NLVWSKNVNELVSTHGY 398 (415)
Q Consensus 335 ~V~~l~~sp~~~~llasggg--~~d~~I~iwd----~~t~~~~~~~-----~~~~~V~-----~l~~s~~~~~l~s~~g~ 398 (415)
.+..++|+|+++ ++++... .....|.+|| +.++++...+ .+...+. .+.|+|+|+.|+...+.
T Consensus 254 ~~~~~~~SpD~~-~~~~~~~~~~~~~~l~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~ 332 (719)
T 1z68_A 254 YFSWLTWVTDER-VCLQWLKRVQNVSVLSICDFREDWQTWDCPKTQEHIEESRTGWAGGFFVSTPVFSYDAISYYKIFSD 332 (719)
T ss_dssp EEEEEEESSSSE-EEEEEEESSTTEEEEEEEEECSSSSSEECCGGGEEEEECSSSCSSSSSCCCCEECTTSSCEEEEEEC
T ss_pred eEEEeEEeCCCe-EEEEEeccccCeEEEEEEcccCCCCCCceEEEEecccccCCceEccccCCccEECCCCCeEEEEEEc
Confidence 899999999975 6665321 1124588999 8887655443 2344454 78999999977653344
Q ss_pred CCC--cEEEEECCCC
Q 014934 399 SQN--QIIVWRYPTM 411 (415)
Q Consensus 399 ~dg--~I~vw~~~s~ 411 (415)
.+| .|.+|++.+.
T Consensus 333 ~~g~~~l~~~~~~~~ 347 (719)
T 1z68_A 333 KDGYKHIHYIKDTVE 347 (719)
T ss_dssp TTSCEEEEEESSCST
T ss_pred cCCceEEEEEECCCC
Confidence 455 5666676543
No 154
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.79 E-value=2.6e-17 Score=157.42 Aligned_cols=219 Identities=14% Similarity=0.132 Sum_probs=154.5
Q ss_pred CeEEEE--ECCCCCeEEeEecCCCCCeEEEEEcCCCCeEEEEEC---CCcEEEEECCCCe--eeEEecCCCccEEEEEee
Q 014934 187 NCVYLW--NACSSKVTKLCDLGIDDSVCSVGWANRNTHLAVGTS---HGKVQIWDASRCK--RVRTMEGHRLRVGALAWS 259 (415)
Q Consensus 187 ~~V~iw--d~~~~~~~~~~~~~~~~~V~~v~~sp~g~~la~g~~---dg~V~iwd~~~~~--~~~~l~~h~~~V~~l~~~ 259 (415)
+.|++| |..+++...+....+...+..++|+|+|+ |++++. ++.|.+||+.+++ .+..+..+...+..++|+
T Consensus 16 ~~i~v~~~d~~tg~~~~~~~~~~~~~p~~~a~spdg~-l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~s 94 (347)
T 3hfq_A 16 QGIYQGTLDTTAKTLTNDGLLAATQNPTYLALSAKDC-LYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAVD 94 (347)
T ss_dssp CEEEEEEEETTTTEEEEEEEEEECSCCCCEEECTTCE-EEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCCSEEEEE
T ss_pred CCEEEEEEcCCCCeEEEeeeeeccCCcceEEEccCCe-EEEEEecCCCceEEEEEecCCcEEEeeeeecCCCCCEEEEEC
Confidence 455555 55567665544334557788999999999 555544 6899999997665 444445567778889998
Q ss_pred --CCEEEEEe-CCCcEEEEECCCCCc--cEEEecc---------ccCCeEEEEEeCCCCEEEEEeCCCcEEEEECC-CCc
Q 014934 260 --SSLLSSGS-RDKSILQRDIRAQED--FVSKLSG---------HKSEVCGLKWSYDNRELASGGNDNRLFVWNQH-STQ 324 (415)
Q Consensus 260 --~~~l~sgs-~dg~I~iwd~~~~~~--~~~~~~~---------h~~~V~~l~~spdg~~lasg~~dg~I~iwd~~-~~~ 324 (415)
+++|++++ .++.|.+||+..... .+..+.. +...+.+++|+|+|++++++..++.|.+||+. +++
T Consensus 95 pdg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~~~g~ 174 (347)
T 3hfq_A 95 EARQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVSDAGQ 174 (347)
T ss_dssp TTTTEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEEEECTTSC
T ss_pred CCCCEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEEEEECCCCc
Confidence 46777777 789999999964321 1222211 12248899999999977777778999999998 454
Q ss_pred ee--EEecc-CCCcEEEEEEcCCCCcEEEEEcCCCCCeEEEEECCC--CcE--EEEeeC-C------CCEEEEEECCCCC
Q 014934 325 PV--LKYCE-HTAAVKAIAWSPHLHGLLASGGGTADRCIRFWNTTT--NTH--LSCMDT-G------SQVCNLVWSKNVN 390 (415)
Q Consensus 325 ~~--~~~~~-h~~~V~~l~~sp~~~~llasggg~~d~~I~iwd~~t--~~~--~~~~~~-~------~~V~~l~~s~~~~ 390 (415)
.. ..+.. ....+..++|+|+|+.+++++. .++.|.+|++.. ++. +..+.. . ..+..++|+|+|+
T Consensus 175 ~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~--~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~ 252 (347)
T 3hfq_A 175 LSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGE--LSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGH 252 (347)
T ss_dssp EEEEEEEECCTTCCEEEEEECTTSSEEEEEET--TTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTTSC
T ss_pred EEEeeeEEcCCCCCCceEEECCCCCEEEEEeC--CCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECCCCC
Confidence 32 22222 2336788999999997888776 689999999874 543 223321 1 4588899999999
Q ss_pred eEEEEEecCCCcEEEEECC
Q 014934 391 ELVSTHGYSQNQIIVWRYP 409 (415)
Q Consensus 391 ~l~s~~g~~dg~I~vw~~~ 409 (415)
+|+++ +..++.|.+|++.
T Consensus 253 ~l~v~-~~~~~~v~v~~~~ 270 (347)
T 3hfq_A 253 FLYVS-NRGYNTLAVFAVT 270 (347)
T ss_dssp EEEEE-EETTTEEEEEEEC
T ss_pred EEEEE-eCCCCEEEEEEEC
Confidence 88664 4568899999986
No 155
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.79 E-value=1.4e-17 Score=161.21 Aligned_cols=240 Identities=9% Similarity=0.024 Sum_probs=165.6
Q ss_pred ceeEeecCC-CcEEEEEcCCeEEEEECC-CCCeEEeEecCCCCCeEEEEEcCCCCe--EEEEE-------------CCCc
Q 014934 169 YLNLVDWSS-HNVLAVGLGNCVYLWNAC-SSKVTKLCDLGIDDSVCSVGWANRNTH--LAVGT-------------SHGK 231 (415)
Q Consensus 169 ~i~~l~ws~-~~~la~~~d~~V~iwd~~-~~~~~~~~~~~~~~~V~~v~~sp~g~~--la~g~-------------~dg~ 231 (415)
.+..++|+| +++|+++..+.|.+|++. +++...+......+.+.+++|+|+|++ ++++. .+|.
T Consensus 41 ~~~~~a~spdg~~l~~~~~~~v~~~~~~~~g~~~~~~~~~~~g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~ 120 (365)
T 1jof_A 41 PISWMTFDHERKNIYGAAMKKWSSFAVKSPTEIVHEASHPIGGHPRANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGY 120 (365)
T ss_dssp CCSEEEECTTSSEEEEEEBTEEEEEEEEETTEEEEEEEEECCSSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCCE
T ss_pred CCcEEEECCCCCEEEEEccceEEEEEECCCCCEEEeeEeecCCCCccEEECCCCCEEEEEEecCCcceeccceeecCCce
Confidence 356788999 676666654499999987 777655443211134667899999994 44543 6899
Q ss_pred EEEEECC-CCeeeEEec----CCCccEEEEEee--CCEEEEEe-CCCcEEEEECC-CCCcc-EEEec--cccCCeEEEEE
Q 014934 232 VQIWDAS-RCKRVRTME----GHRLRVGALAWS--SSLLSSGS-RDKSILQRDIR-AQEDF-VSKLS--GHKSEVCGLKW 299 (415)
Q Consensus 232 V~iwd~~-~~~~~~~l~----~h~~~V~~l~~~--~~~l~sgs-~dg~I~iwd~~-~~~~~-~~~~~--~h~~~V~~l~~ 299 (415)
+.+|++. +++....+. .+...+.+++|+ +++|+++. .++.|.+||+. +++.. +..+. .|...+..++|
T Consensus 121 v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~ 200 (365)
T 1jof_A 121 GNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAM 200 (365)
T ss_dssp EEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEE
T ss_pred EEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEE
Confidence 9999997 455443333 245679999998 45777665 46799999998 55421 22232 24567999999
Q ss_pred eCCCCEEEEEeC-CCcEEEEECC--CCcee---EEec-------cCCC------cEEEEE-EcCCCCcEEEEEcCCCC--
Q 014934 300 SYDNRELASGGN-DNRLFVWNQH--STQPV---LKYC-------EHTA------AVKAIA-WSPHLHGLLASGGGTAD-- 357 (415)
Q Consensus 300 spdg~~lasg~~-dg~I~iwd~~--~~~~~---~~~~-------~h~~------~V~~l~-~sp~~~~llasggg~~d-- 357 (415)
+|||++|++++. ++.|.+|++. +++.. ..+. +|.. .+..++ |+|+|+.|+++..+ .+
T Consensus 201 spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~-~~~~ 279 (365)
T 1jof_A 201 HPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRA-NKFE 279 (365)
T ss_dssp CTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEE-SSTT
T ss_pred CCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCEEEEECCC-CCCC
Confidence 999999988775 6899999765 45542 1222 1222 588999 99999977766531 22
Q ss_pred --CeEEEEECC-CCcEEE---Eee-CCCCEEEEEECC---CCCeEEEEEecCCCcEEEEECCC
Q 014934 358 --RCIRFWNTT-TNTHLS---CMD-TGSQVCNLVWSK---NVNELVSTHGYSQNQIIVWRYPT 410 (415)
Q Consensus 358 --~~I~iwd~~-t~~~~~---~~~-~~~~V~~l~~s~---~~~~l~s~~g~~dg~I~vw~~~s 410 (415)
+.|.+|++. +|+... .+. ....+..++|+| +|++|+++ +..++.|.+|++..
T Consensus 280 ~~~~i~v~~~~~~g~~~~~~~~~~~~~~~~~~~a~sp~~~dg~~l~v~-~~~~~~v~v~~~~~ 341 (365)
T 1jof_A 280 LQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPCPWSDEWMAIT-DDQEGWLEIYRWKD 341 (365)
T ss_dssp SCCEEEEEEECTTSCEEEEEEEEECSSCCTTCCCEEECTTCTTEEEEE-CSSSCEEEEEEEET
T ss_pred CCCeEEEEEECCCCCEEEeeeeeecCCCCcccceecCCCcCCCEEEEE-EcCCCeEEEEEEch
Confidence 289999996 676543 233 344567789999 89999884 33458999999864
No 156
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.78 E-value=1.4e-16 Score=153.34 Aligned_cols=220 Identities=7% Similarity=0.047 Sum_probs=157.5
Q ss_pred CCeEEEEEC--CCCCeEEeEecCCCCCeEEEEEcCCCCeEEEEECC----CcEEEEECCC--Ce--eeEEecCCCccEEE
Q 014934 186 GNCVYLWNA--CSSKVTKLCDLGIDDSVCSVGWANRNTHLAVGTSH----GKVQIWDASR--CK--RVRTMEGHRLRVGA 255 (415)
Q Consensus 186 d~~V~iwd~--~~~~~~~~~~~~~~~~V~~v~~sp~g~~la~g~~d----g~V~iwd~~~--~~--~~~~l~~h~~~V~~ 255 (415)
++.|++|.+ .+++...+... +...+..++|+|+|++|++++.+ |.|.+|++.. ++ .+.....+......
T Consensus 26 ~~~i~~~~~d~~~g~~~~~~~~-~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~~~p~~ 104 (361)
T 3scy_A 26 SKGIYTFRFNEETGESLPLSDA-EVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTMGADPCY 104 (361)
T ss_dssp CCEEEEEEEETTTCCEEEEEEE-ECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEECSSSCEEE
T ss_pred CCCEEEEEEeCCCCCEEEeecc-cCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEeccCCCCcEE
Confidence 457888754 66777666654 66788899999999999998886 7999998865 43 33444445567778
Q ss_pred EEeeCCEEEEEe-CCCcEEEEECCCCCccE---E--Eecc--------ccCCeEEEEEeCCCCEEEEEe-CCCcEEEEEC
Q 014934 256 LAWSSSLLSSGS-RDKSILQRDIRAQEDFV---S--KLSG--------HKSEVCGLKWSYDNRELASGG-NDNRLFVWNQ 320 (415)
Q Consensus 256 l~~~~~~l~sgs-~dg~I~iwd~~~~~~~~---~--~~~~--------h~~~V~~l~~spdg~~lasg~-~dg~I~iwd~ 320 (415)
+++++++|++++ .++.|.+|++....... . ...+ +...+.+++|+|+|++|++++ .++.|.+|++
T Consensus 105 ~~~dg~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~ 184 (361)
T 3scy_A 105 LTTNGKNIVTANYSGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQIHKFNI 184 (361)
T ss_dssp EEECSSEEEEEETTTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEEEEEEE
T ss_pred EEECCCEEEEEECCCCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCEEEEEEE
Confidence 888777777666 68899999997543211 1 1111 123458899999999776655 5889999988
Q ss_pred CCCce------e-------EEeccCCCcEEEEEEcCCCCcEEEEEcCCCCCeEEEEECCCCcE--EEEee----CCCCEE
Q 014934 321 HSTQP------V-------LKYCEHTAAVKAIAWSPHLHGLLASGGGTADRCIRFWNTTTNTH--LSCMD----TGSQVC 381 (415)
Q Consensus 321 ~~~~~------~-------~~~~~h~~~V~~l~~sp~~~~llasggg~~d~~I~iwd~~t~~~--~~~~~----~~~~V~ 381 (415)
..... + .....+...+..++|+|+++.+++++. .++.|.+|++.+++. +..+. +.....
T Consensus 185 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~--~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~ 262 (361)
T 3scy_A 185 NPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINE--IGGTVIAFRYADGMLDEIQTVAADTVNAQGSG 262 (361)
T ss_dssp CTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEET--TTCEEEEEEEETTEEEEEEEEESCSSCCCCEE
T ss_pred cCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcC--CCCeEEEEEecCCceEEeEEEecCCCCCCCcc
Confidence 75431 1 112244567889999999997777775 689999999987754 33332 224578
Q ss_pred EEEECCCCCeEEEEEecC-CCcEEEEECC
Q 014934 382 NLVWSKNVNELVSTHGYS-QNQIIVWRYP 409 (415)
Q Consensus 382 ~l~~s~~~~~l~s~~g~~-dg~I~vw~~~ 409 (415)
.++|+|+|++|+++ ... ++.|.+|++.
T Consensus 263 ~i~~spdg~~l~v~-~~~~~~~i~v~~~~ 290 (361)
T 3scy_A 263 DIHLSPDGKYLYAS-NRLKADGVAIFKVD 290 (361)
T ss_dssp EEEECTTSSEEEEE-ECSSSCEEEEEEEC
T ss_pred cEEECCCCCEEEEE-CCCCCCEEEEEEEc
Confidence 99999999998775 334 6899999985
No 157
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.78 E-value=3e-17 Score=180.13 Aligned_cols=234 Identities=10% Similarity=0.004 Sum_probs=182.1
Q ss_pred ceeEeecCCCcEEEEE-cCCeEE-EEECCCCCeEEeEecCCCCCeEEEEEcCCCCeEEEEECCCcEEEEECCCCeeeEEe
Q 014934 169 YLNLVDWSSHNVLAVG-LGNCVY-LWNACSSKVTKLCDLGIDDSVCSVGWANRNTHLAVGTSHGKVQIWDASRCKRVRTM 246 (415)
Q Consensus 169 ~i~~l~ws~~~~la~~-~d~~V~-iwd~~~~~~~~~~~~~~~~~V~~v~~sp~g~~la~g~~dg~V~iwd~~~~~~~~~l 246 (415)
.+..+.|+.+..|+++ .+..|+ +|+..+++...+. ++...+.+++|+|||++||+++.++.|++||+.+++....+
T Consensus 339 ~~~~~~~sdg~~l~~~s~~~~l~~~~d~~~~~~~~l~--~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~~ 416 (1045)
T 1k32_A 339 RYVRRGGDTKVAFIHGTREGDFLGIYDYRTGKAEKFE--ENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIE 416 (1045)
T ss_dssp EEEEECSSSEEEEEEEETTEEEEEEEETTTCCEEECC--CCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEE
T ss_pred eEEeeeEcCCCeEEEEECCCceEEEEECCCCCceEec--CCccceeeeEECCCCCEEEEECCCCeEEEEECCCCceEEec
Confidence 5778899943455554 456788 9999888766554 67789999999999999999999999999999999888877
Q ss_pred cCCCccEEEEEee--CCEEEEEeCCC----------cEEEEECCCCCccEEEeccccCCeEEEEEeCCCCEEEEEeCCCc
Q 014934 247 EGHRLRVGALAWS--SSLLSSGSRDK----------SILQRDIRAQEDFVSKLSGHKSEVCGLKWSYDNRELASGGNDNR 314 (415)
Q Consensus 247 ~~h~~~V~~l~~~--~~~l~sgs~dg----------~I~iwd~~~~~~~~~~~~~h~~~V~~l~~spdg~~lasg~~dg~ 314 (415)
.+|...+.+++|+ +++|++++.++ .|++||+.++. ...+..|...+..++|+|||++|++++.++.
T Consensus 417 ~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~--~~~l~~~~~~~~~~~~spdG~~l~~~s~~~~ 494 (1045)
T 1k32_A 417 RSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRK--IFAATTENSHDYAPAFDADSKNLYYLSYRSL 494 (1045)
T ss_dssp ECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTE--EEECSCSSSBEEEEEECTTSCEEEEEESCCC
T ss_pred cCCCCCccceEECCCCCeEEEEecCccccccCCCCCeEEEEECCCCc--EEEeeCCCcccCCceEcCCCCEEEEEecccC
Confidence 7899999999998 46787776644 89999998765 5677788888999999999999999998877
Q ss_pred EEEEECCCCc-------------------------------------------eeEEeccCCCcEEEEEEcCCCCcEEEE
Q 014934 315 LFVWNQHSTQ-------------------------------------------PVLKYCEHTAAVKAIAWSPHLHGLLAS 351 (415)
Q Consensus 315 I~iwd~~~~~-------------------------------------------~~~~~~~h~~~V~~l~~sp~~~~llas 351 (415)
..+|+..... .+..+..|.+.+..++++|++..+++.
T Consensus 495 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~~~~~~~l~~~~~~~~~~~~s~dg~~~~~~ 574 (1045)
T 1k32_A 495 DPSPDRVVLNFSFEVVSKPFVIPLIPGSPNPTKLVPRSMTSEAGEYDLNDMYKRSSPINVDPGDYRMIIPLESSILIYSV 574 (1045)
T ss_dssp CCEECSSSSCEECCSCBEEEEEESSTTCCCGGGCCCGGGSCCCCCCCCTTGGGGCEECSCCCBCEEEEEECSSEEEEEEC
T ss_pred CcCcchhccccccccCceeEEEEeCCCCCCccccCcCccccccccccccCHhHceEEcCCCCCChhheEEcCCCeEEEEe
Confidence 7766643211 123344566788999999998644431
Q ss_pred ----------EcCCCCCeEEEEECCCCcEEEEeeCCCCEEEEEECCCCCeEEEEEecCCCcEEEEECCCCc
Q 014934 352 ----------GGGTADRCIRFWNTTTNTHLSCMDTGSQVCNLVWSKNVNELVSTHGYSQNQIIVWRYPTMS 412 (415)
Q Consensus 352 ----------ggg~~d~~I~iwd~~t~~~~~~~~~~~~V~~l~~s~~~~~l~s~~g~~dg~I~vw~~~s~~ 412 (415)
.+......|.+||+.+++..... ..+..++|+|||+.|+++ .. +.|++|++.+.+
T Consensus 575 ~~~g~~~~~~~~~~~~~~l~~~d~~~~~~~~l~---~~v~~~~~S~DG~~l~~~--~~-~~i~~~d~~~~~ 639 (1045)
T 1k32_A 575 PVHGEFAAYYQGAPEKGVLLKYDVKTRKVTEVK---NNLTDLRLSADRKTVMVR--KD-DGKIYTFPLEKP 639 (1045)
T ss_dssp CCCCSHHHHHHCCCCCEEEEEEETTTCCEEEEE---EEEEEEEECTTSCEEEEE--ET-TSCEEEEESSCT
T ss_pred cccCcccccccccCCCceEEEEECCCCcEEEee---cCcceEEECCCCCEEEEE--cC-CcEEEEeCccCc
Confidence 11114568999999998854333 568889999999999984 33 489999998765
No 158
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.77 E-value=4.1e-16 Score=148.69 Aligned_cols=236 Identities=12% Similarity=0.091 Sum_probs=178.8
Q ss_pred ceeEeecCC-CcEEEEEcCC-------------------------eEEEEECCCCCeEEeEecCCCCCeEEEEEcCCCCe
Q 014934 169 YLNLVDWSS-HNVLAVGLGN-------------------------CVYLWNACSSKVTKLCDLGIDDSVCSVGWANRNTH 222 (415)
Q Consensus 169 ~i~~l~ws~-~~~la~~~d~-------------------------~V~iwd~~~~~~~~~~~~~~~~~V~~v~~sp~g~~ 222 (415)
.+..|++++ ++++++..++ .|++||..++++.......+-..+..++++++|++
T Consensus 25 ~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~g~l 104 (329)
T 3fvz_A 25 QVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNLFYLPHGLSIDTDGNY 104 (329)
T ss_dssp CEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTTCSSEEEEEECTTSCE
T ss_pred CceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCccCCceEEEECCCCCE
Confidence 478899999 7777777544 69999999999876654344467999999999998
Q ss_pred EEEEECCCcEEEEECCCCe-eeEEe---------cCCCccEEEEEeeC---CEEEEEe-CCCcEEEEECCCCCccEEEec
Q 014934 223 LAVGTSHGKVQIWDASRCK-RVRTM---------EGHRLRVGALAWSS---SLLSSGS-RDKSILQRDIRAQEDFVSKLS 288 (415)
Q Consensus 223 la~g~~dg~V~iwd~~~~~-~~~~l---------~~h~~~V~~l~~~~---~~l~sgs-~dg~I~iwd~~~~~~~~~~~~ 288 (415)
+++...++.|++||..... .+..+ .++......|++++ .++++.+ .++.|++||.. +. .+..+.
T Consensus 105 ~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~~~-g~-~~~~~~ 182 (329)
T 3fvz_A 105 WVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFSPS-GK-FVTQWG 182 (329)
T ss_dssp EEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEECTT-SC-EEEEEC
T ss_pred EEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEcCC-CC-EEEEec
Confidence 8888888999999986442 45555 34455788999984 4566665 58999999943 33 344443
Q ss_pred c----------ccCCeEEEEEeCC-CCEEEEEeCCCcEEEEECCCCceeEEec--cCCCcEEEEEEcCCCCcEEEEEc--
Q 014934 289 G----------HKSEVCGLKWSYD-NRELASGGNDNRLFVWNQHSTQPVLKYC--EHTAAVKAIAWSPHLHGLLASGG-- 353 (415)
Q Consensus 289 ~----------h~~~V~~l~~spd-g~~lasg~~dg~I~iwd~~~~~~~~~~~--~h~~~V~~l~~sp~~~~llasgg-- 353 (415)
. +-....+|+++|+ +.++++...++.|++||..+++.+..+. .+...+.+++|+| + .++++.+
T Consensus 183 ~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~~~~~~~~~~~~~p-g-~~~~~~g~~ 260 (329)
T 3fvz_A 183 EESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHASFGRNVFAISYIP-G-FLFAVNGKP 260 (329)
T ss_dssp EECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECCTTTTTCEEEEEEET-T-EEEEEECCC
T ss_pred cCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEeccccCCCcceeeecC-C-EEEEeCCCE
Confidence 2 2234899999998 7777788888999999999898888874 4667889999999 3 2444432
Q ss_pred ---CCCCCeEEEEECCCCcEEEEee----CCCCEEEEEECCCCCeEEEEEecCCCcEEEEECCC
Q 014934 354 ---GTADRCIRFWNTTTNTHLSCMD----TGSQVCNLVWSKNVNELVSTHGYSQNQIIVWRYPT 410 (415)
Q Consensus 354 ---g~~d~~I~iwd~~t~~~~~~~~----~~~~V~~l~~s~~~~~l~s~~g~~dg~I~vw~~~s 410 (415)
...+..|++||..+++.+..+. +...+.+++++++|..+++ ...++.|++|+...
T Consensus 261 ~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~~dG~lyva--d~~~~~I~~~~~~~ 322 (329)
T 3fvz_A 261 YFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVASEDGTVYIG--DAHTNTVWKFTLTE 322 (329)
T ss_dssp CTTCSCCCCEEEEETTTCCEEEEECCSSSCCSSEEEEEECTTSEEEEE--ESSSCCEEEEEEEE
T ss_pred EeccCCCcEEEEEEcCCCeEEEEEcCCCCccCCeeEEEECCCCCEEEE--ECCCCEEEEEeCCc
Confidence 1135689999999999998874 3456899999999966666 66788999999754
No 159
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.77 E-value=3.8e-17 Score=172.85 Aligned_cols=237 Identities=14% Similarity=0.159 Sum_probs=167.2
Q ss_pred eEeecCC-CcEEEEEcCCeEEEEECCCCCeEEeEecCCCC-----CeEEEEEcCCCCeEEEEECC---------CcEEEE
Q 014934 171 NLVDWSS-HNVLAVGLGNCVYLWNACSSKVTKLCDLGIDD-----SVCSVGWANRNTHLAVGTSH---------GKVQIW 235 (415)
Q Consensus 171 ~~l~ws~-~~~la~~~d~~V~iwd~~~~~~~~~~~~~~~~-----~V~~v~~sp~g~~la~g~~d---------g~V~iw 235 (415)
..+.|+| +.+|+.+ ++.|++||+.+++...++. .|.. ....+.|||||++|++++.+ +.+.+|
T Consensus 20 ~~~~w~~dg~~~~~~-~~~i~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~ 97 (740)
T 4a5s_A 20 YSLRWISDHEYLYKQ-ENNILVFNAEYGNSSVFLE-NSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDIY 97 (740)
T ss_dssp CCEEECSSSEEEEEE-TTEEEEEETTTCCEEEEEC-TTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEEE
T ss_pred cccEECCCCcEEEEc-CCcEEEEECCCCceEEEEe-chhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceEEEEE
Confidence 3678999 6677776 9999999999999877765 3332 22458999999999998876 567799
Q ss_pred ECCCCeeeEEecCCCccEEEEEee--CCEEEEEeCCCcEEEEECCCCCccEEEeccccCCe-----------------EE
Q 014934 236 DASRCKRVRTMEGHRLRVGALAWS--SSLLSSGSRDKSILQRDIRAQEDFVSKLSGHKSEV-----------------CG 296 (415)
Q Consensus 236 d~~~~~~~~~l~~h~~~V~~l~~~--~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V-----------------~~ 296 (415)
|+.+++.. .+..|...+...+|+ ++.|+.+ .|+.|++||+.++.....+..++...+ .+
T Consensus 98 d~~~~~~~-~l~~~~~~~~~~~~SPdG~~la~~-~~~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~~~~~~~ 175 (740)
T 4a5s_A 98 DLNKRQLI-TEERIPNNTQWVTWSPVGHKLAYV-WNNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSA 175 (740)
T ss_dssp ETTTTEEC-CSSCCCTTEEEEEECSSTTCEEEE-ETTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSSBC
T ss_pred ECCCCcEE-EcccCCCcceeeEECCCCCEEEEE-ECCeEEEEECCCCceEEEcCCCCccceecCcccccccchhcCCCcc
Confidence 99998755 466778889999999 4677777 468999999987763222223333323 35
Q ss_pred EEEeCCCCEEEEEeCCC------------------------------------cEEEEECCC---Cc--eeEEec-----
Q 014934 297 LKWSYDNRELASGGNDN------------------------------------RLFVWNQHS---TQ--PVLKYC----- 330 (415)
Q Consensus 297 l~~spdg~~lasg~~dg------------------------------------~I~iwd~~~---~~--~~~~~~----- 330 (415)
+.|||||+.||.++.|. .|+|||+.+ ++ ....+.
T Consensus 176 ~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~~~~l~~~~~~ 255 (740)
T 4a5s_A 176 LWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQITAPASM 255 (740)
T ss_dssp EEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCCCEEEECCCHHH
T ss_pred eEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCcceEEEecCCccC
Confidence 89999999999875321 588999988 73 233443
Q ss_pred -cCCCcEEEEEEcCCCCcEEEEEc-CCCCCeEEEEECCCCc----EE--EE---eeCCCCE-----EEEEECCCCCeEE-
Q 014934 331 -EHTAAVKAIAWSPHLHGLLASGG-GTADRCIRFWNTTTNT----HL--SC---MDTGSQV-----CNLVWSKNVNELV- 393 (415)
Q Consensus 331 -~h~~~V~~l~~sp~~~~llasgg-g~~d~~I~iwd~~t~~----~~--~~---~~~~~~V-----~~l~~s~~~~~l~- 393 (415)
+|...+..++|+|+|+.++.... +..+..|++||+.+|+ +. .. -.+...| ....|+|||+.|+
T Consensus 256 ~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~~~l~~~~~~~~v~~~~~~~p~fspDG~~l~~ 335 (740)
T 4a5s_A 256 LIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGRFRPSEPHFTLDGNSFYK 335 (740)
T ss_dssp HTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTTTEEEECGGGCEEEECSSSCSSSSSCCCCEECTTSSEEEE
T ss_pred CCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCccccceeEEEEeeeccCCceEccCcCCCceEcCCCCEEEE
Confidence 37788999999999984443322 1234579999999987 22 11 1233333 3688999999887
Q ss_pred EEEecCCC--cEEEEECCCCc
Q 014934 394 STHGYSQN--QIIVWRYPTMS 412 (415)
Q Consensus 394 s~~g~~dg--~I~vw~~~s~~ 412 (415)
.. ...+| .|++|+..+.+
T Consensus 336 ~~-s~~~G~~~l~~~~~~~~~ 355 (740)
T 4a5s_A 336 II-SNEEGYRHICYFQIDKKD 355 (740)
T ss_dssp EE-ECTTSCEEEEEEETTCSS
T ss_pred EE-EcCCCceEEEEEECCCCc
Confidence 43 33343 67888876543
No 160
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.77 E-value=1.2e-16 Score=151.04 Aligned_cols=198 Identities=13% Similarity=0.056 Sum_probs=151.7
Q ss_pred eeEeecCC-CcEEE-EEc-CCeEEEEECCCCCeEEeEecCCC----CCeEEEEEcCCCCeEEEEE------------CCC
Q 014934 170 LNLVDWSS-HNVLA-VGL-GNCVYLWNACSSKVTKLCDLGID----DSVCSVGWANRNTHLAVGT------------SHG 230 (415)
Q Consensus 170 i~~l~ws~-~~~la-~~~-d~~V~iwd~~~~~~~~~~~~~~~----~~V~~v~~sp~g~~la~g~------------~dg 230 (415)
+..++|+| ++.++ ++. ++.|++||+.+++....+..++. ..+.+++|+|+|++|+++. .++
T Consensus 36 ~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~ 115 (337)
T 1pby_B 36 PMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPT 115 (337)
T ss_dssp CCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCC
T ss_pred ccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCcccccccccceEECCCCCEEEEEecccccccccccccCc
Confidence 45788999 54544 443 57999999999998777664431 2677899999999999886 579
Q ss_pred cEEEEECCCCeeeEEecCCCccEEEEEee--CCEEEEEeCCCcEEEEECCCCCccEEEec--------------------
Q 014934 231 KVQIWDASRCKRVRTMEGHRLRVGALAWS--SSLLSSGSRDKSILQRDIRAQEDFVSKLS-------------------- 288 (415)
Q Consensus 231 ~V~iwd~~~~~~~~~l~~h~~~V~~l~~~--~~~l~sgs~dg~I~iwd~~~~~~~~~~~~-------------------- 288 (415)
.|.+||+.+++.+..+.. ...+.+++|+ +++|+++ ++.|.+||+.++.. ...+.
T Consensus 116 ~i~v~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~--~~~i~~~d~~~~~~-~~~~~~~~~~~~~~~s~dg~~l~~~ 191 (337)
T 1pby_B 116 RVALYDAETLSRRKAFEA-PRQITMLAWARDGSKLYGL--GRDLHVMDPEAGTL-VEDKPIQSWEAETYAQPDVLAVWNQ 191 (337)
T ss_dssp EEEEEETTTTEEEEEEEC-CSSCCCEEECTTSSCEEEE--SSSEEEEETTTTEE-EEEECSTTTTTTTBCCCBCCCCCCC
T ss_pred eEEEEECCCCcEEEEEeC-CCCcceeEECCCCCEEEEe--CCeEEEEECCCCcE-eeeeeccccCCCceeCCCccEEeee
Confidence 999999999888877764 3457778888 4567666 68899999876542 22221
Q ss_pred ----------------------------------------------cccCCeEEEEEeCCCCEEEEEeCCCcEEEEECCC
Q 014934 289 ----------------------------------------------GHKSEVCGLKWSYDNRELASGGNDNRLFVWNQHS 322 (415)
Q Consensus 289 ----------------------------------------------~h~~~V~~l~~spdg~~lasg~~dg~I~iwd~~~ 322 (415)
.+...+.+++|+|+|++|+++ ++.|.+||+.+
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~--~~~v~~~d~~~ 269 (337)
T 1pby_B 192 HESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRAFGA--YNVLESFDLEK 269 (337)
T ss_dssp CTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECTTSSEEEEE--ESEEEEEETTT
T ss_pred ccCCCceeeeeeccccccccccccccccceEEEeCCCCCceEeecCCCCCceeeEEECCCCCEEEEe--CCeEEEEECCC
Confidence 112245579999999999988 79999999999
Q ss_pred CceeEEeccCCCcEEEEEEcCCCCcEEEEEcCCCCCeEEEEECCCCcEEEEeeCC
Q 014934 323 TQPVLKYCEHTAAVKAIAWSPHLHGLLASGGGTADRCIRFWNTTTNTHLSCMDTG 377 (415)
Q Consensus 323 ~~~~~~~~~h~~~V~~l~~sp~~~~llasggg~~d~~I~iwd~~t~~~~~~~~~~ 377 (415)
++.+..+.. ...+.+++|+|+++.++++ + .++.|++||+.+++.+..+..+
T Consensus 270 ~~~~~~~~~-~~~~~~~~~s~dg~~l~~~-~--~~~~i~v~d~~~~~~~~~~~~~ 320 (337)
T 1pby_B 270 NASIKRVPL-PHSYYSVNVSTDGSTVWLG-G--ALGDLAAYDAETLEKKGQVDLP 320 (337)
T ss_dssp TEEEEEEEC-SSCCCEEEECTTSCEEEEE-S--BSSEEEEEETTTCCEEEEEECG
T ss_pred CcCcceecC-CCceeeEEECCCCCEEEEE-c--CCCcEEEEECcCCcEEEEEEcC
Confidence 988877754 3567899999999866664 4 5899999999999998887643
No 161
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.77 E-value=3.7e-17 Score=158.45 Aligned_cols=241 Identities=13% Similarity=0.082 Sum_probs=167.9
Q ss_pred cceeEeecCC-CcEEEEEc--CC--eEEEEECCCCCeEEeEecCCCCCeEEEEEcCCCCeEEEEECCCcEEEEECCCCee
Q 014934 168 FYLNLVDWSS-HNVLAVGL--GN--CVYLWNACSSKVTKLCDLGIDDSVCSVGWANRNTHLAVGTSHGKVQIWDASRCKR 242 (415)
Q Consensus 168 ~~i~~l~ws~-~~~la~~~--d~--~V~iwd~~~~~~~~~~~~~~~~~V~~v~~sp~g~~la~g~~dg~V~iwd~~~~~~ 242 (415)
.|+...+|+| ++.|+++. ++ .|++||+.+++...+.. ++...+.++.|+|||++|+.+..++.|.+||+.+++.
T Consensus 36 ~~~~~~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~-~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~g~~ 114 (388)
T 3pe7_A 36 NYFYQKCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQLTE-GRGDNTFGGFLSPDDDALFYVKDGRNLMRVDLATLEE 114 (388)
T ss_dssp CCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTCEEEECCC-SSCBCSSSCEECTTSSEEEEEETTTEEEEEETTTCCE
T ss_pred hhhcCccCCCCCCEEEEEEcCCCCceEEEEeCCCCceEEeee-CCCCCccceEEcCCCCEEEEEeCCCeEEEEECCCCcc
Confidence 3445578999 67666664 34 59999999998877664 4445555778999999999999999999999999887
Q ss_pred eEEecCCCccEEEEEe--e--CCEEEEE----------------------eCCCcEEEEECCCCCccEEEeccccCCeEE
Q 014934 243 VRTMEGHRLRVGALAW--S--SSLLSSG----------------------SRDKSILQRDIRAQEDFVSKLSGHKSEVCG 296 (415)
Q Consensus 243 ~~~l~~h~~~V~~l~~--~--~~~l~sg----------------------s~dg~I~iwd~~~~~~~~~~~~~h~~~V~~ 296 (415)
...+..+...+....| + +..++.. ..+..|++||+.+++ ...+..+...+..
T Consensus 115 ~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~--~~~l~~~~~~~~~ 192 (388)
T 3pe7_A 115 NVVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGE--STVILQENQWLGH 192 (388)
T ss_dssp EEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCC--EEEEEEESSCEEE
T ss_pred eeeeechhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCc--eEEeecCCccccc
Confidence 7767666666655554 3 4555532 244679999998875 4455567778999
Q ss_pred EEEeC-CCCEEEEEeCC------CcEEEEECCCCceeEEeccCC--CcEEEEEEcCCCCcEEEEEcC--CCCCeEEEEEC
Q 014934 297 LKWSY-DNRELASGGND------NRLFVWNQHSTQPVLKYCEHT--AAVKAIAWSPHLHGLLASGGG--TADRCIRFWNT 365 (415)
Q Consensus 297 l~~sp-dg~~lasg~~d------g~I~iwd~~~~~~~~~~~~h~--~~V~~l~~sp~~~~llasggg--~~d~~I~iwd~ 365 (415)
++|+| ||+.||.+..+ ..|.++|+..+.. ..+..+. ..+..++|+|+|+.|+..+.. ..+..|++||+
T Consensus 193 ~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~-~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~ 271 (388)
T 3pe7_A 193 PIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNM-RKVKTHAEGESCTHEFWVPDGSALVYVSYLKGSPDRFIYSADP 271 (388)
T ss_dssp EEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCC-EESCCCCTTEEEEEEEECTTSSCEEEEEEETTCCCEEEEEECT
T ss_pred cEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCce-EEeeeCCCCcccccceECCCCCEEEEEecCCCCCcceEEEEec
Confidence 99999 99999887753 3788999876544 4444444 357889999999977554431 11224999999
Q ss_pred CCCcEEEEeeCCCC------EEEEEECCCCCeEEEEEe-------cCCCcEEEEECCCCc
Q 014934 366 TTNTHLSCMDTGSQ------VCNLVWSKNVNELVSTHG-------YSQNQIIVWRYPTMS 412 (415)
Q Consensus 366 ~t~~~~~~~~~~~~------V~~l~~s~~~~~l~s~~g-------~~dg~I~vw~~~s~~ 412 (415)
.+++.......... ...+.|+|+|+.|+.+.. ..+..|++||..+.+
T Consensus 272 ~~g~~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~ 331 (388)
T 3pe7_A 272 ETLENRQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFLYVFNMKNGT 331 (388)
T ss_dssp TTCCEEEEEEECCEEEEEECTTSSEEEEEECCC------------CCCCEEEEEETTTTE
T ss_pred CCCceEEEEcCCCceeeeecCCCCeEccCCCcceeEeeeccccccCCCCEEEEEeccCCc
Confidence 99985432221110 112379999999886421 346689999998754
No 162
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.76 E-value=3.1e-15 Score=139.03 Aligned_cols=233 Identities=9% Similarity=0.111 Sum_probs=170.1
Q ss_pred ceeEeecCC-CcEEEEE-cCCeEEEEECCCCCeEEeEec-----CCCCCeEEEEE-cCCCCeEEEEEC-CCcEEEEECCC
Q 014934 169 YLNLVDWSS-HNVLAVG-LGNCVYLWNACSSKVTKLCDL-----GIDDSVCSVGW-ANRNTHLAVGTS-HGKVQIWDASR 239 (415)
Q Consensus 169 ~i~~l~ws~-~~~la~~-~d~~V~iwd~~~~~~~~~~~~-----~~~~~V~~v~~-sp~g~~la~g~~-dg~V~iwd~~~ 239 (415)
....+++++ ++++++. .++.|++|+.. ++....+.. ++...+.++++ .++|.++++... ++.|.+|| .+
T Consensus 31 ~p~~v~~~~~g~l~v~~~~~~~i~~~d~~-g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~~d-~~ 108 (286)
T 1q7f_A 31 EPSGVAVNAQNDIIVADTNNHRIQIFDKE-GRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIYN-QY 108 (286)
T ss_dssp CEEEEEECTTCCEEEEEGGGTEEEEECTT-SCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEEEC-TT
T ss_pred CCceEEECCCCCEEEEECCCCEEEEECCC-CcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCCEEEEEC-CC
Confidence 467888888 6666665 46899999987 555444421 22357899999 467776665543 78999999 56
Q ss_pred CeeeEEec-CCCccEEEEEee--CCEEEEEeCCCcEEEEECCCCCccEEEec--cccCCeEEEEEeCCCCEEEEEeCCCc
Q 014934 240 CKRVRTME-GHRLRVGALAWS--SSLLSSGSRDKSILQRDIRAQEDFVSKLS--GHKSEVCGLKWSYDNRELASGGNDNR 314 (415)
Q Consensus 240 ~~~~~~l~-~h~~~V~~l~~~--~~~l~sgs~dg~I~iwd~~~~~~~~~~~~--~h~~~V~~l~~spdg~~lasg~~dg~ 314 (415)
++.+..+. .+...+.+++++ ++++++...++.|.+||.... .+..+. .+...+.+++++++|+++++...++.
T Consensus 109 g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g~--~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~ 186 (286)
T 1q7f_A 109 GQFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQNGN--VLHKFGCSKHLEFPNGVVVNDKQEIFISDNRAHC 186 (286)
T ss_dssp SCEEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTTSC--EEEEEECTTTCSSEEEEEECSSSEEEEEEGGGTE
T ss_pred CcEEEEecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcCCCC--EEEEeCCCCccCCcEEEEECCCCCEEEEECCCCE
Confidence 77666664 344678899997 467777777899999996533 334432 34557899999999998888888999
Q ss_pred EEEEECCCCceeEEeccC--CCcEEEEEEcCCCCcEEEEEcCCCCC-eEEEEECCCCcEEEEeeCC---CCEEEEEECCC
Q 014934 315 LFVWNQHSTQPVLKYCEH--TAAVKAIAWSPHLHGLLASGGGTADR-CIRFWNTTTNTHLSCMDTG---SQVCNLVWSKN 388 (415)
Q Consensus 315 I~iwd~~~~~~~~~~~~h--~~~V~~l~~sp~~~~llasggg~~d~-~I~iwd~~t~~~~~~~~~~---~~V~~l~~s~~ 388 (415)
|++||. +++.+..+..+ ...+..++++++|. ++++.. .++ .|.+||. +++.+..+... ..+.+++++++
T Consensus 187 i~~~~~-~g~~~~~~~~~g~~~~p~~i~~d~~G~-l~v~~~--~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~~i~~~~~ 261 (286)
T 1q7f_A 187 VKVFNY-EGQYLRQIGGEGITNYPIGVGINSNGE-ILIADN--HNNFNLTIFTQ-DGQLISALESKVKHAQCFDVALMDD 261 (286)
T ss_dssp EEEEET-TCCEEEEESCTTTSCSEEEEEECTTCC-EEEEEC--SSSCEEEEECT-TSCEEEEEEESSCCSCEEEEEEETT
T ss_pred EEEEcC-CCCEEEEEccCCccCCCcEEEECCCCC-EEEEeC--CCCEEEEEECC-CCCEEEEEcccCCCCcceeEEECCC
Confidence 999997 45566666443 36789999999986 777664 465 9999995 56777666532 34789999999
Q ss_pred CCeEEEEEecCCCcEEEEECCCCcc
Q 014934 389 VNELVSTHGYSQNQIIVWRYPTMSK 413 (415)
Q Consensus 389 ~~~l~s~~g~~dg~I~vw~~~s~~~ 413 (415)
|+.+++ . .++.|++|++.....
T Consensus 262 g~l~vs--~-~~~~v~v~~~~~~~p 283 (286)
T 1q7f_A 262 GSVVLA--S-KDYRLYIYRYVQLAP 283 (286)
T ss_dssp TEEEEE--E-TTTEEEEEECSCCCC
T ss_pred CcEEEE--C-CCCeEEEEEcccccc
Confidence 986665 3 589999999976544
No 163
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.75 E-value=4.5e-17 Score=167.29 Aligned_cols=221 Identities=8% Similarity=0.007 Sum_probs=162.3
Q ss_pred ceeEeecCCCcEEEEEcC----C--eEEEEEC--CCCCeEEeEecCCCCCeEEEEEcCCCCe-EEEEECCCcEEEEECCC
Q 014934 169 YLNLVDWSSHNVLAVGLG----N--CVYLWNA--CSSKVTKLCDLGIDDSVCSVGWANRNTH-LAVGTSHGKVQIWDASR 239 (415)
Q Consensus 169 ~i~~l~ws~~~~la~~~d----~--~V~iwd~--~~~~~~~~~~~~~~~~V~~v~~sp~g~~-la~g~~dg~V~iwd~~~ 239 (415)
.+..+.|+|+++++++.. . .|+.++. ..+.. .+ .....+...+|+|+|+. +++...++.+.+||+.+
T Consensus 66 ~~~~~~~spd~~l~~~~~~~g~~~~~l~~~~~~~~g~~~-~l---~~~~~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~ 141 (582)
T 3o4h_A 66 SVLDPHYGVGRVILVRDVSKGAEQHALFKVNTSRPGEEQ-RL---EAVKPMRILSGVDTGEAVVFTGATEDRVALYALDG 141 (582)
T ss_dssp EECEECTTCSEEEEEEECSTTSCCEEEEEEETTSTTCCE-EC---TTSCSBEEEEEEECSSCEEEEEECSSCEEEEEEET
T ss_pred ccccccCCCCeEEEEeccCCCCcceEEEEEeccCCCccc-cc---cCCCCceeeeeCCCCCeEEEEecCCCCceEEEccC
Confidence 577899999866665542 3 3555565 33332 22 22334557789998863 33344455566999998
Q ss_pred CeeeEEecCCCccEEEEEee--CCEEEEEeCC----CcEEEEECCCCCccEEEeccccCCeEEEEEeCCCCEEEEEeCCC
Q 014934 240 CKRVRTMEGHRLRVGALAWS--SSLLSSGSRD----KSILQRDIRAQEDFVSKLSGHKSEVCGLKWSYDNRELASGGNDN 313 (415)
Q Consensus 240 ~~~~~~l~~h~~~V~~l~~~--~~~l~sgs~d----g~I~iwd~~~~~~~~~~~~~h~~~V~~l~~spdg~~lasg~~dg 313 (415)
++.......+. .+++|+ ++.|++++.+ +.|++||+.++. ...+..|...+..++|+|||++|+++..++
T Consensus 142 g~~~~l~~~~~---~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~--~~~l~~~~~~~~~~~~SpDG~~l~~~~~~~ 216 (582)
T 3o4h_A 142 GGLRELARLPG---FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGG--LRVFDSGEGSFSSASISPGMKVTAGLETAR 216 (582)
T ss_dssp TEEEEEEEESS---CEEEEEEETTEEEEEEEEETTEEEEEEEETTTCC--CEEECCSSCEEEEEEECTTSCEEEEEECSS
T ss_pred CcEEEeecCCC---ceEEECCCCCEEEEEEEcCCCCeEEEEEcCCCCC--ceEeecCCCccccceECCCCCEEEEccCCC
Confidence 87665554333 677776 7899988777 789999998876 346778888899999999999999888888
Q ss_pred --cEEEEECCCCceeEEeccCCCcEEEEE--------EcCCCCcEEEEEcCCCCCeEEEEECCCCcEEEEeeCCCCEEEE
Q 014934 314 --RLFVWNQHSTQPVLKYCEHTAAVKAIA--------WSPHLHGLLASGGGTADRCIRFWNTTTNTHLSCMDTGSQVCNL 383 (415)
Q Consensus 314 --~I~iwd~~~~~~~~~~~~h~~~V~~l~--------~sp~~~~llasggg~~d~~I~iwd~~t~~~~~~~~~~~~V~~l 383 (415)
.|++||+.+++.. .+..|...+..++ |+|+| .++++++ .|+.+++|++ |+.+. .....|.++
T Consensus 217 ~~~i~~~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~spdg-~~~~~~~--~~g~~~l~~~--g~~~~--~~~~~v~~~ 288 (582)
T 3o4h_A 217 EARLVTVDPRDGSVE-DLELPSKDFSSYRPTAITWLGYLPDG-RLAVVAR--REGRSAVFID--GERVE--APQGNHGRV 288 (582)
T ss_dssp CEEEEEECTTTCCEE-ECCCSCSHHHHHCCSEEEEEEECTTS-CEEEEEE--ETTEEEEEET--TEEEC--CCSSEEEEE
T ss_pred eeEEEEEcCCCCcEE-EccCCCcChhhhhhccccceeEcCCC-cEEEEEE--cCCcEEEEEE--CCeec--cCCCceEEE
Confidence 8999999998877 7778887777777 99999 6888876 7999999999 76554 233568899
Q ss_pred EECCCCCeEEEEEecCC---CcEEEEECC
Q 014934 384 VWSKNVNELVSTHGYSQ---NQIIVWRYP 409 (415)
Q Consensus 384 ~~s~~~~~l~s~~g~~d---g~I~vw~~~ 409 (415)
+|+ +++.+++. +.+ ..|.+|+..
T Consensus 289 ~~s-dg~~l~~~--s~~~~p~~l~~~d~~ 314 (582)
T 3o4h_A 289 VLW-RGKLVTSH--TSLSTPPRIVSLPSG 314 (582)
T ss_dssp EEE-TTEEEEEE--EETTEEEEEEEETTC
T ss_pred Eec-CCEEEEEE--cCCCCCCeEEEEcCC
Confidence 999 88888764 333 346666654
No 164
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.73 E-value=2.2e-17 Score=173.76 Aligned_cols=237 Identities=11% Similarity=0.107 Sum_probs=166.1
Q ss_pred ceeEeecCC-CcEEEEEcC----------CeEEEEECCCCCeEEeEecCCCCCeEEEEEcCCCCeEEEEECCCcEEEEEC
Q 014934 169 YLNLVDWSS-HNVLAVGLG----------NCVYLWNACSSKVTKLCDLGIDDSVCSVGWANRNTHLAVGTSHGKVQIWDA 237 (415)
Q Consensus 169 ~i~~l~ws~-~~~la~~~d----------~~V~iwd~~~~~~~~~~~~~~~~~V~~v~~sp~g~~la~g~~dg~V~iwd~ 237 (415)
.+..++||| ++.|+++.+ +.|++||+.+++......+ ...+.+++|+|||++||++. ++.|++||+
T Consensus 61 ~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~~~~l--~~~~~~~~~SPDG~~la~~~-~~~i~~~~~ 137 (719)
T 1z68_A 61 NASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEFVRGNEL--PRPIQYLCWSPVGSKLAYVY-QNNIYLKQR 137 (719)
T ss_dssp TCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSCC--CSSBCCEEECSSTTCEEEEE-TTEEEEESS
T ss_pred ceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCCCccccceec--CcccccceECCCCCEEEEEE-CCeEEEEeC
Confidence 367899999 787877743 7899999999876211111 25689999999999999985 789999999
Q ss_pred CCCeeeEEe-cCCCccE-----------------EEEEee--CCEEEEEeCCC---------------------------
Q 014934 238 SRCKRVRTM-EGHRLRV-----------------GALAWS--SSLLSSGSRDK--------------------------- 270 (415)
Q Consensus 238 ~~~~~~~~l-~~h~~~V-----------------~~l~~~--~~~l~sgs~dg--------------------------- 270 (415)
.+++..... .++...| .+++|+ ++.|++++.|.
T Consensus 138 ~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~ 217 (719)
T 1z68_A 138 PGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKA 217 (719)
T ss_dssp TTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBT
T ss_pred CCCCcEEEecCCCcCCeEcccccceeeeecccCcccEEECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCC
Confidence 888765433 2333323 479998 46888887552
Q ss_pred -------cEEEEECCCCCcc--EE-----EeccccCCeEEEEEeCCCCEEEEEeCC----CcEEEEE----CCCCceeEE
Q 014934 271 -------SILQRDIRAQEDF--VS-----KLSGHKSEVCGLKWSYDNRELASGGND----NRLFVWN----QHSTQPVLK 328 (415)
Q Consensus 271 -------~I~iwd~~~~~~~--~~-----~~~~h~~~V~~l~~spdg~~lasg~~d----g~I~iwd----~~~~~~~~~ 328 (415)
.|++||+.++... +. .+.+|...+..++|+||++++++.... ..|.+|| +.+++....
T Consensus 218 g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~~~~~ 297 (719)
T 1z68_A 218 GAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYFSWLTWVTDERVCLQWLKRVQNVSVLSICDFREDWQTWDCPKT 297 (719)
T ss_dssp TSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEEEEEEEESSSSEEEEEEEESSTTEEEEEEEEECSSSSSEECCGG
T ss_pred CCCCCeeEEEEEECCCCCccceeEccCCccCCCCcceEEEeEEeCCCeEEEEEeccccCeEEEEEEcccCCCCCCceEEE
Confidence 7889999876521 11 123577889999999998877775433 2489999 877765444
Q ss_pred e----ccCCCcEE-----EEEEcCCCCcEEE-EEcCCCCCeEEEEECCCCcEEEEeeCCCCEEEEEECCCCCeEEEEEec
Q 014934 329 Y----CEHTAAVK-----AIAWSPHLHGLLA-SGGGTADRCIRFWNTTTNTHLSCMDTGSQVCNLVWSKNVNELVSTHGY 398 (415)
Q Consensus 329 ~----~~h~~~V~-----~l~~sp~~~~lla-sggg~~d~~I~iwd~~t~~~~~~~~~~~~V~~l~~s~~~~~l~s~~g~ 398 (415)
+ ..|...+. .++|+|+|+.++. ++.......|.+||+.+++......+...+..+.++ +++.|+.+ +.
T Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~g~~~l~~~~~~~~~~~~lt~~~~~v~~~~~~-d~~~i~~~-~~ 375 (719)
T 1z68_A 298 QEHIEESRTGWAGGFFVSTPVFSYDAISYYKIFSDKDGYKHIHYIKDTVENAIQITSGKWEAINIFRV-TQDSLFYS-SN 375 (719)
T ss_dssp GEEEEECSSSCSSSSSCCCCEECTTSSCEEEEEECTTSCEEEEEESSCSTTCEECSCSSSCEEEEEEE-CSSEEEEE-ES
T ss_pred EecccccCCceEccccCCccEECCCCCeEEEEEEccCCceEEEEEECCCCceEecccCceEEEEEEEE-eCCEEEEE-Ee
Confidence 4 36777676 8899999987665 333112346888898887743332344567887777 88888775 33
Q ss_pred C----CCcEEEEECCC
Q 014934 399 S----QNQIIVWRYPT 410 (415)
Q Consensus 399 ~----dg~I~vw~~~s 410 (415)
. ++.+.+|.++.
T Consensus 376 ~~~~~~~~~~l~~~~~ 391 (719)
T 1z68_A 376 EFEEYPGRRNIYRISI 391 (719)
T ss_dssp CGGGCTTCBEEEEEEC
T ss_pred cCCCCCceEEEEEEeC
Confidence 3 47888888753
No 165
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.72 E-value=6.3e-16 Score=146.93 Aligned_cols=197 Identities=13% Similarity=0.073 Sum_probs=147.3
Q ss_pred eeEeecCC-CcEEE-EE-cCCeEEEEECCCCCeEEeEecCC-----CCCeEEEEEcCCCCeEEEEECC------------
Q 014934 170 LNLVDWSS-HNVLA-VG-LGNCVYLWNACSSKVTKLCDLGI-----DDSVCSVGWANRNTHLAVGTSH------------ 229 (415)
Q Consensus 170 i~~l~ws~-~~~la-~~-~d~~V~iwd~~~~~~~~~~~~~~-----~~~V~~v~~sp~g~~la~g~~d------------ 229 (415)
+..++|+| ++.++ ++ .++.|++||+.+++....+...+ ...+.+++|+|+|++|++++.+
T Consensus 45 ~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~ 124 (349)
T 1jmx_B 45 PGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKP 124 (349)
T ss_dssp SCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECC
T ss_pred CceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEEcccccccccccccceEECCCCCEEEEEcccccccccccccCC
Confidence 56788998 55444 44 46899999999998877766443 2337899999999999998865
Q ss_pred CcEEEEECCCCe---eeEEecCCCccEEEEEee--CCEEEEEeCCCcEEEEECCCCCccEEEeccc--------------
Q 014934 230 GKVQIWDASRCK---RVRTMEGHRLRVGALAWS--SSLLSSGSRDKSILQRDIRAQEDFVSKLSGH-------------- 290 (415)
Q Consensus 230 g~V~iwd~~~~~---~~~~l~~h~~~V~~l~~~--~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h-------------- 290 (415)
+.|.+||+.+++ .+..+. +...+.+++|+ ++ +++++. .|.+||+.+++ ....+..+
T Consensus 125 ~~i~~~d~~~~~~~~~~~~~~-~~~~~~~~~~s~dg~-l~~~~~--~i~~~d~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 199 (349)
T 1jmx_B 125 PRLEVFSTADGLEAKPVRTFP-MPRQVYLMRAADDGS-LYVAGP--DIYKMDVKTGK-YTVALPLRNWNRKGYSAPDVLY 199 (349)
T ss_dssp CEEEEEEGGGGGGBCCSEEEE-CCSSCCCEEECTTSC-EEEESS--SEEEECTTTCC-EEEEECSTTCCCTTBCCCBCCC
T ss_pred CeEEEEECCCccccceeeecc-CCCcccceeECCCCc-EEEccC--cEEEEeCCCCc-eeccccccccCCccccCcccee
Confidence 899999998743 334444 33458888898 45 555543 49999998776 23333221
Q ss_pred ------------------------------------------------------cCCeEEEEEeC-CCCEEEEEeCCCcE
Q 014934 291 ------------------------------------------------------KSEVCGLKWSY-DNRELASGGNDNRL 315 (415)
Q Consensus 291 ------------------------------------------------------~~~V~~l~~sp-dg~~lasg~~dg~I 315 (415)
...+.+++|+| ++++|+++ ++.|
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~--~~~v 277 (349)
T 1jmx_B 200 FWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGV--LNRL 277 (349)
T ss_dssp CCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECSSCTTEEEEE--ESEE
T ss_pred eecCCCcceeEEeeeeeeecCCCcCCccccccceeEEEEeccCCcEEecccccCCCcceeeEecCCCCCEEEEE--cCeE
Confidence 11456778889 99999988 8899
Q ss_pred EEEECCCCceeEEeccCCCcEEEEEEcCCCCcEEEEEcCCCCCeEEEEECCCCcEEEEeeCC
Q 014934 316 FVWNQHSTQPVLKYCEHTAAVKAIAWSPHLHGLLASGGGTADRCIRFWNTTTNTHLSCMDTG 377 (415)
Q Consensus 316 ~iwd~~~~~~~~~~~~h~~~V~~l~~sp~~~~llasggg~~d~~I~iwd~~t~~~~~~~~~~ 377 (415)
.+||+.+++.+..+.. ...+.+++|+|+++.++++ + .++.|++||+.+++.+..+...
T Consensus 278 ~~~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~-~--~~~~v~v~d~~~~~~~~~~~~~ 335 (349)
T 1jmx_B 278 AKYDLKQRKLIKAANL-DHTYYCVAFDKKGDKLYLG-G--TFNDLAVFNPDTLEKVKNIKLP 335 (349)
T ss_dssp EEEETTTTEEEEEEEC-SSCCCEEEECSSSSCEEEE-S--BSSEEEEEETTTTEEEEEEECS
T ss_pred EEEECccCeEEEEEcC-CCCccceEECCCCCEEEEe-c--CCCeEEEEeccccceeeeeecC
Confidence 9999999988777753 3457899999999877774 3 5899999999999988887643
No 166
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.71 E-value=4.9e-16 Score=150.48 Aligned_cols=238 Identities=14% Similarity=0.111 Sum_probs=160.2
Q ss_pred ceeEeecCC-CcEEEEEcC----CeEEEEECCCCCeEEeEecCCCCCeEEEEEcCCCCeEEEEECCCcEEEEECCCCeee
Q 014934 169 YLNLVDWSS-HNVLAVGLG----NCVYLWNACSSKVTKLCDLGIDDSVCSVGWANRNTHLAVGTSHGKVQIWDASRCKRV 243 (415)
Q Consensus 169 ~i~~l~ws~-~~~la~~~d----~~V~iwd~~~~~~~~~~~~~~~~~V~~v~~sp~g~~la~g~~dg~V~iwd~~~~~~~ 243 (415)
++..++|+| ++.|++..+ ..|++|+..+++...+.. ++......+.|+|||++|+.++.++.|.+||+.+++..
T Consensus 37 ~~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~~~l~~-~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~~~~~ 115 (396)
T 3c5m_A 37 YFYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQAVQLTE-GKGDNTFGGFISTDERAFFYVKNELNLMKVDLETLEEQ 115 (396)
T ss_dssp CTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTTEEEECCC-SSCBCTTTCEECTTSSEEEEEETTTEEEEEETTTCCEE
T ss_pred eeecCcCCCCCCEEEEEEecCCCceEEEEECCCCcEEEeec-CCCCccccceECCCCCEEEEEEcCCcEEEEECCCCCcE
Confidence 355678999 777766632 379999999888765543 22222334789999999999999999999999988766
Q ss_pred EEecCCCccEEE---E----------------Eee--CCEEEEE-----eCCCcEEEEECCCCCccEEEeccccCCeEEE
Q 014934 244 RTMEGHRLRVGA---L----------------AWS--SSLLSSG-----SRDKSILQRDIRAQEDFVSKLSGHKSEVCGL 297 (415)
Q Consensus 244 ~~l~~h~~~V~~---l----------------~~~--~~~l~sg-----s~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l 297 (415)
.....+...... + .|+ ++.++.+ ..+..|++||+.++. ...+..+...+..+
T Consensus 116 ~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~g~--~~~~~~~~~~~~~~ 193 (396)
T 3c5m_A 116 VIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIETGE--LEVIHQDTAWLGHP 193 (396)
T ss_dssp EEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEEETTTCC--EEEEEEESSCEEEE
T ss_pred EEEecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcceEEEEECCCCc--EEeeccCCcccccc
Confidence 555544432222 2 222 1222222 356689999998876 23334567789999
Q ss_pred EEeC-CCCEEEEEeCC------CcEEEEECCCCceeEEeccC--CCcEEEEEEcCCCCcEEEEEc--CCCCCeEEEEECC
Q 014934 298 KWSY-DNRELASGGND------NRLFVWNQHSTQPVLKYCEH--TAAVKAIAWSPHLHGLLASGG--GTADRCIRFWNTT 366 (415)
Q Consensus 298 ~~sp-dg~~lasg~~d------g~I~iwd~~~~~~~~~~~~h--~~~V~~l~~sp~~~~llasgg--g~~d~~I~iwd~~ 366 (415)
.|+| +++.|+..+.+ ..|.+||+..++.. .+..+ ...+..++|+|+|+.|++.+. +..++.|++||+.
T Consensus 194 ~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~-~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~ 272 (396)
T 3c5m_A 194 IYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVR-KIKEHAEGESCTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPE 272 (396)
T ss_dssp EEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCE-ESSCCCTTEEEEEEEECTTSSCEEEEEEETTTCCEEEEEECTT
T ss_pred eECCCCCCEEEEEecCCCCCCCceEEEEECCCCcee-EeeccCCCccccceEECCCCCEEEEEecCCCCccceEEEEECC
Confidence 9999 88877776543 46999998766533 33333 235788999999997766543 1112459999999
Q ss_pred CCcEEEEeeCCCCEEEEEECC-CCCeEEEEEe--------------cCCCcEEEEECCCCc
Q 014934 367 TNTHLSCMDTGSQVCNLVWSK-NVNELVSTHG--------------YSQNQIIVWRYPTMS 412 (415)
Q Consensus 367 t~~~~~~~~~~~~V~~l~~s~-~~~~l~s~~g--------------~~dg~I~vw~~~s~~ 412 (415)
+++........ ... +.|++ +|+.++++.+ ..++.|.+||..+.+
T Consensus 273 ~g~~~~l~~~~-~~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~ 331 (396)
T 3c5m_A 273 TLENEEVMVMP-PCS-HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAKS 331 (396)
T ss_dssp TCCEEEEEECC-SEE-EEEECSSSSEEEEEECCC----------CCCCCCEEEEEETTTTB
T ss_pred CCCeEEeeeCC-CCC-CCccCCCCceEEEecCCcceeeccccccccCCCCcEEEEecccCc
Confidence 88765433322 233 89999 9998876421 134789999987654
No 167
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.71 E-value=4.5e-15 Score=143.42 Aligned_cols=219 Identities=9% Similarity=0.028 Sum_probs=151.1
Q ss_pred CeEEEEE--CCCCCeEEeEec--CCCCCeEEEEEcCCCCeEEEEECCCcEEEEECC-CCeeeEEec--CCCccEEEEEee
Q 014934 187 NCVYLWN--ACSSKVTKLCDL--GIDDSVCSVGWANRNTHLAVGTSHGKVQIWDAS-RCKRVRTME--GHRLRVGALAWS 259 (415)
Q Consensus 187 ~~V~iwd--~~~~~~~~~~~~--~~~~~V~~v~~sp~g~~la~g~~dg~V~iwd~~-~~~~~~~l~--~h~~~V~~l~~~ 259 (415)
+.|++|+ ..++++..+... .....+..++|+|+|++|++++.+ .|.+||+. +++...... .+ +.+.+++|+
T Consensus 14 ~~i~~~~~d~~~g~l~~~~~~~~~~~~~~~~~a~spdg~~l~~~~~~-~v~~~~~~~~g~~~~~~~~~~~-g~~~~~~~s 91 (365)
T 1jof_A 14 GAIFTVQFDDEKLTCKLIKRTEIPQDEPISWMTFDHERKNIYGAAMK-KWSSFAVKSPTEIVHEASHPIG-GHPRANDAD 91 (365)
T ss_dssp CEEEEEEEETTTTEEEEEEEEECCTTCCCSEEEECTTSSEEEEEEBT-EEEEEEEEETTEEEEEEEEECC-SSGGGGCTT
T ss_pred CcEEEEEEECCCCCEEEeeEEccCCCCCCcEEEECCCCCEEEEEccc-eEEEEEECCCCCEEEeeEeecC-CCCccEEEC
Confidence 5688765 456766444322 334578899999999999998888 99999997 776544322 11 224456777
Q ss_pred C--C--EEEEEe-------------CCCcEEEEECCCCCccEEEec----cccCCeEEEEEeCCCCEEEEEeC-CCcEEE
Q 014934 260 S--S--LLSSGS-------------RDKSILQRDIRAQEDFVSKLS----GHKSEVCGLKWSYDNRELASGGN-DNRLFV 317 (415)
Q Consensus 260 ~--~--~l~sgs-------------~dg~I~iwd~~~~~~~~~~~~----~h~~~V~~l~~spdg~~lasg~~-dg~I~i 317 (415)
+ + +++++. .+|.+.+|++.........+. .+...+.+++|+|||++|++++. ++.|++
T Consensus 92 pdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~ 171 (365)
T 1jof_A 92 TNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWT 171 (365)
T ss_dssp SCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEE
T ss_pred CCCCEEEEEEecCCcceeccceeecCCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCEEEE
Confidence 3 4 244543 689999999974332332222 24567999999999998887764 689999
Q ss_pred EECC-CCcee--EEec--cCCCcEEEEEEcCCCCcEEEEEcCCCCCeEEEEECC--CCcEE---EEee---CC----C--
Q 014934 318 WNQH-STQPV--LKYC--EHTAAVKAIAWSPHLHGLLASGGGTADRCIRFWNTT--TNTHL---SCMD---TG----S-- 378 (415)
Q Consensus 318 wd~~-~~~~~--~~~~--~h~~~V~~l~~sp~~~~llasggg~~d~~I~iwd~~--t~~~~---~~~~---~~----~-- 378 (415)
||+. +++.. ..+. .|...+..++|+|+|+.++++.. .++.|.+|++. +|+.. ..+. .+ .
T Consensus 172 ~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~--~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~ 249 (365)
T 1jof_A 172 HRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALME--AGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPE 249 (365)
T ss_dssp EEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEET--TTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTT
T ss_pred EEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEEC--CCCeEEEEEEeCCCCcEEEccceEEcCCCCcCCcccc
Confidence 9998 67543 2333 24667999999999997777664 57899999765 56643 2232 11 2
Q ss_pred -----CEEEEE-ECCCCCeEEEEEecCC----CcEEEEECC
Q 014934 379 -----QVCNLV-WSKNVNELVSTHGYSQ----NQIIVWRYP 409 (415)
Q Consensus 379 -----~V~~l~-~s~~~~~l~s~~g~~d----g~I~vw~~~ 409 (415)
.+..++ |+|+|++|+++....+ +.|.+|++.
T Consensus 250 ~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~ 290 (365)
T 1jof_A 250 TGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLR 290 (365)
T ss_dssp TSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEEC
T ss_pred cccccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEEC
Confidence 488899 9999999887533233 289999985
No 168
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.68 E-value=9.6e-15 Score=141.34 Aligned_cols=233 Identities=8% Similarity=-0.033 Sum_probs=156.4
Q ss_pred EeecCC-CcEEEEEc-CCeEEEEECCCCCeEEeEecCCCCCeEEEE--EcCCCCeEEEEE--------------------
Q 014934 172 LVDWSS-HNVLAVGL-GNCVYLWNACSSKVTKLCDLGIDDSVCSVG--WANRNTHLAVGT-------------------- 227 (415)
Q Consensus 172 ~l~ws~-~~~la~~~-d~~V~iwd~~~~~~~~~~~~~~~~~V~~v~--~sp~g~~la~g~-------------------- 227 (415)
.+.|+| ++.|+++. ++.|++||+.+++...+.. .+...+.... ++++|++++...
T Consensus 85 ~~~~spdg~~l~~~~~~~~l~~~d~~~g~~~~~~~-~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~ 163 (388)
T 3pe7_A 85 GGFLSPDDDALFYVKDGRNLMRVDLATLEENVVYQ-VPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYF 163 (388)
T ss_dssp SCEECTTSSEEEEEETTTEEEEEETTTCCEEEEEE-CCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGG
T ss_pred ceEEcCCCCEEEEEeCCCeEEEEECCCCcceeeee-chhhcccccceeECCCCCeeccccccCcccccccccchhhhhhc
Confidence 457999 66777764 6799999999999877776 3444454444 489999887432
Q ss_pred --CCCcEEEEECCCCeeeEEecCCCccEEEEEeeC---CEEEEEeCC------CcEEEEECCCCCccEEEecccc--CCe
Q 014934 228 --SHGKVQIWDASRCKRVRTMEGHRLRVGALAWSS---SLLSSGSRD------KSILQRDIRAQEDFVSKLSGHK--SEV 294 (415)
Q Consensus 228 --~dg~V~iwd~~~~~~~~~l~~h~~~V~~l~~~~---~~l~sgs~d------g~I~iwd~~~~~~~~~~~~~h~--~~V 294 (415)
.++.|.+||+.+++... +..+...+..++|++ ..|+.+..+ ..|.++|..... ...+..+. ..+
T Consensus 164 ~~~~~~l~~~d~~~g~~~~-l~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~--~~~l~~~~~~~~~ 240 (388)
T 3pe7_A 164 TKPCCRLMRVDLKTGESTV-ILQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTN--MRKVKTHAEGESC 240 (388)
T ss_dssp GCCCEEEEEEETTTCCEEE-EEEESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCC--CEESCCCCTTEEE
T ss_pred cCCcceEEEEECCCCceEE-eecCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCc--eEEeeeCCCCccc
Confidence 34679999999886544 444667789999987 456655543 378888887654 34444444 357
Q ss_pred EEEEEeCCCCEEEEEeCC-C----cEEEEECCCCce--eEEeccCCCc---EEEEEEcCCCCcEEEEEc------CCCCC
Q 014934 295 CGLKWSYDNRELASGGND-N----RLFVWNQHSTQP--VLKYCEHTAA---VKAIAWSPHLHGLLASGG------GTADR 358 (415)
Q Consensus 295 ~~l~~spdg~~lasg~~d-g----~I~iwd~~~~~~--~~~~~~h~~~---V~~l~~sp~~~~llasgg------g~~d~ 358 (415)
..+.|+|||+.|+..+.+ + .|++||+.+++. +..+.++... ...++|+|+|+.++++.. +..+.
T Consensus 241 ~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~ 320 (388)
T 3pe7_A 241 THEFWVPDGSALVYVSYLKGSPDRFIYSADPETLENRQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDP 320 (388)
T ss_dssp EEEEECTTSSCEEEEEEETTCCCEEEEEECTTTCCEEEEEEECCEEEEEECTTSSEEEEEECCC------------CCCC
T ss_pred ccceECCCCCEEEEEecCCCCCcceEEEEecCCCceEEEEcCCCceeeeecCCCCeEccCCCcceeEeeeccccccCCCC
Confidence 789999999987664432 2 399999998864 3333321111 112379999997776531 02477
Q ss_pred eEEEEECCCCcEEEEeeCCC-----------CEEEEEECCCCCeEEEEEecCCCcEEEEECC
Q 014934 359 CIRFWNTTTNTHLSCMDTGS-----------QVCNLVWSKNVNELVSTHGYSQNQIIVWRYP 409 (415)
Q Consensus 359 ~I~iwd~~t~~~~~~~~~~~-----------~V~~l~~s~~~~~l~s~~g~~dg~I~vw~~~ 409 (415)
.|++||+.+++......+.. .+..++|+|||+.|+.+ +..++...||.+.
T Consensus 321 ~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~spDg~~l~~~-s~~~g~~~l~~~~ 381 (388)
T 3pe7_A 321 FLYVFNMKNGTQHRVARHDTSWKVFEGDRQVTHPHPSFTPDDKQILFT-SDVHGKPALYLAT 381 (388)
T ss_dssp EEEEEETTTTEEEEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEE-ECTTSSCEEEEEE
T ss_pred EEEEEeccCCceEEeccccCcccccccccccCCCCccCCCCCCEEEEE-ecCCCceeEEEEE
Confidence 99999999987654444444 47889999999999886 3456766666654
No 169
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.68 E-value=1e-14 Score=141.03 Aligned_cols=233 Identities=9% Similarity=0.026 Sum_probs=167.6
Q ss_pred EeecCC-CcEEEEEc-----------CCeEEEEECCCCCeEEeEecC-----CCCCeEEEEEcCCCCeEEEEEC--CCcE
Q 014934 172 LVDWSS-HNVLAVGL-----------GNCVYLWNACSSKVTKLCDLG-----IDDSVCSVGWANRNTHLAVGTS--HGKV 232 (415)
Q Consensus 172 ~l~ws~-~~~la~~~-----------d~~V~iwd~~~~~~~~~~~~~-----~~~~V~~v~~sp~g~~la~g~~--dg~V 232 (415)
.+.++| ++.|.++. ++.|.+||..+.+....+... +......++++|+|++|+++.. ++.|
T Consensus 54 ~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n~~~~~~v 133 (361)
T 2oiz_A 54 HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKRVQGLNYDGLFRQTTDGKFIVLQNASPATSI 133 (361)
T ss_dssp EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTBCCBCCCGGGEEECTTSSEEEEEEESSSEEE
T ss_pred ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCccccccCCCcceEEECCCCCEEEEECCCCCCeE
Confidence 788999 67777763 457999999998887777643 2345778999999999999874 5789
Q ss_pred EEEECCCCeeeEE-ecCCCccEEEEEee---CCEEEEEeCCCcEEEEECCCCCccEE------EeccccCCeEEEEEeCC
Q 014934 233 QIWDASRCKRVRT-MEGHRLRVGALAWS---SSLLSSGSRDKSILQRDIRAQEDFVS------KLSGHKSEVCGLKWSYD 302 (415)
Q Consensus 233 ~iwd~~~~~~~~~-l~~h~~~V~~l~~~---~~~l~sgs~dg~I~iwd~~~~~~~~~------~~~~h~~~V~~l~~spd 302 (415)
.+||+.+++.+.. +.. ... ..+.+. +..+++.+.||.+.+|++........ .+..+..++ .+.++++
T Consensus 134 ~v~d~~~~~~~~~~i~~-~~~-~~v~~~p~~~~~~~~~~~dg~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~ 210 (361)
T 2oiz_A 134 GIVDVAKGDYVEDVTAA-AGC-WSVIPQPNRPRSFMTICGDGGLLTINLGEDGKVASQSRSKQMFSVKDDPI-FIAPALD 210 (361)
T ss_dssp EEEETTTTEEEEEEGGG-TTE-EEEEECTTSSSEEEEEETTSSEEEEEECTTSSEEEEEECCCCSCTTTSCB-CSCCEEC
T ss_pred EEEECCCCcEEEEEecC-CCc-ceeEEcCCCCeeEEEECCCCcEEEEEECCCCcEeeeccccceEcCCCCce-EEEeccc
Confidence 9999999998887 653 222 223333 35788899999999999876333221 112222222 2344678
Q ss_pred CCEEEEEeCCCcEEEEECCCCcee--EEecc------CC----CcEEEEEEcCCCCcEEEEEc--CC------CCCeEEE
Q 014934 303 NRELASGGNDNRLFVWNQHSTQPV--LKYCE------HT----AAVKAIAWSPHLHGLLASGG--GT------ADRCIRF 362 (415)
Q Consensus 303 g~~lasg~~dg~I~iwd~~~~~~~--~~~~~------h~----~~V~~l~~sp~~~~llasgg--g~------~d~~I~i 362 (415)
+..++..+.++.|.++|+...... ..+.. +. .....++|+|+++.++++.. |. ....|.+
T Consensus 211 g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~v 290 (361)
T 2oiz_A 211 KDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLVGLHRASGRMYVFMHPDGKEGTHKFPAAEIWV 290 (361)
T ss_dssp SSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCEEEETTTTEEEEEEESSCCTTCTTCCCSEEEE
T ss_pred CCEEEEEeCCCeEEEEEecCCCceecccccccCccccccccccCCeeEEEEecCCCeEEEEEccCCCcccccCCCceEEE
Confidence 888888889999999999765322 22211 00 11123789999888887653 10 1358999
Q ss_pred EECCCCcEEEEeeCCCCEEEEEECCCCCeEEEEEecCCCcEEEEECCCC
Q 014934 363 WNTTTNTHLSCMDTGSQVCNLVWSKNVNELVSTHGYSQNQIIVWRYPTM 411 (415)
Q Consensus 363 wd~~t~~~~~~~~~~~~V~~l~~s~~~~~l~s~~g~~dg~I~vw~~~s~ 411 (415)
||+.+++.+..+..+. +.+++|+|+|++|+++ .. +.|.+||..++
T Consensus 291 iD~~t~~~v~~i~~~~-p~~ia~spdg~~l~v~--n~-~~v~v~D~~t~ 335 (361)
T 2oiz_A 291 MDTKTKQRVARIPGRD-ALSMTIDQQRNLMLTL--DG-GNVNVYDISQP 335 (361)
T ss_dssp EETTTTEEEEEEECTT-CCEEEEETTTTEEEEE--CS-SCEEEEECSSS
T ss_pred EECCCCcEEEEEecCC-eeEEEECCCCCEEEEe--CC-CeEEEEECCCC
Confidence 9999999999998777 9999999999999884 34 89999999987
No 170
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.68 E-value=2.2e-14 Score=151.00 Aligned_cols=251 Identities=12% Similarity=0.032 Sum_probs=176.6
Q ss_pred ceeccCCCCCC--CcceeEeecCC-CcEEEEEcC--C----eEEEEECCCCCeEEeEecCCCCCeEEEEEcCCCCeEEEE
Q 014934 156 YKILDAPALQD--DFYLNLVDWSS-HNVLAVGLG--N----CVYLWNACSSKVTKLCDLGIDDSVCSVGWANRNTHLAVG 226 (415)
Q Consensus 156 ~~~ld~~~l~~--~~~i~~l~ws~-~~~la~~~d--~----~V~iwd~~~~~~~~~~~~~~~~~V~~v~~sp~g~~la~g 226 (415)
..++|...+.. .+.+..+.||| ++.||.+.+ | .|++||+.+++...... .+ ..+.+++|+|||+.|+.+
T Consensus 111 ~~lld~~~l~~~~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~-~~-~~~~~~~wspDg~~l~~~ 188 (710)
T 2xdw_A 111 RVFLDPNILSDDGTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVL-ER-VKFSCMAWTHDGKGMFYN 188 (710)
T ss_dssp EEEECGGGGCTTSCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEE-EE-ECSCCEEECTTSSEEEEE
T ss_pred EEEECHHHhccCCCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCcccc-cC-cccceEEEEeCCCEEEEE
Confidence 34455443332 24688999999 788887742 2 89999999998776432 22 236789999999999999
Q ss_pred ECCCc----------------EEEEECCCCee--eEEec--CCCccEEEEEee--CCEEEEEeC-----CCcEEEEECCC
Q 014934 227 TSHGK----------------VQIWDASRCKR--VRTME--GHRLRVGALAWS--SSLLSSGSR-----DKSILQRDIRA 279 (415)
Q Consensus 227 ~~dg~----------------V~iwd~~~~~~--~~~l~--~h~~~V~~l~~~--~~~l~sgs~-----dg~I~iwd~~~ 279 (415)
+.++. |.+|++.+++. ...+. .|...+..+.|+ +++|+.++. +..|++||+.+
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~ 268 (710)
T 2xdw_A 189 AYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQ 268 (710)
T ss_dssp ECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGG
T ss_pred EECCccccccccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcc
Confidence 88766 99999987652 22233 356668889998 467766654 56899999986
Q ss_pred ------CCccEEEeccccCCeEEEEEeCCCCEEEEEeCC----CcEEEEECCCCc--eeEEeccCCC--cEEEEEEcCCC
Q 014934 280 ------QEDFVSKLSGHKSEVCGLKWSYDNRELASGGND----NRLFVWNQHSTQ--PVLKYCEHTA--AVKAIAWSPHL 345 (415)
Q Consensus 280 ------~~~~~~~~~~h~~~V~~l~~spdg~~lasg~~d----g~I~iwd~~~~~--~~~~~~~h~~--~V~~l~~sp~~ 345 (415)
+......+..+...+.. .|+|+|+.|+..++. +.|.+||+.++. ....+..|.. .+..++|++++
T Consensus 269 ~~~~~~~~~~~~~l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 347 (710)
T 2xdw_A 269 ESNGITGILKWVKLIDNFEGEYD-YVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSN 347 (710)
T ss_dssp SSSSSCSSCCCEEEECSSSSCEE-EEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEEEETTT
T ss_pred cccccCCccceEEeeCCCCcEEE-EEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCCCCCeEEEEEEEcCC
Confidence 43224555666666654 588999988876654 369999998774 2344545544 68889999655
Q ss_pred CcEEEEEcCCCCC--eEEEEECCCCcEEEEeeC-CCCEEEEEECCCCCeEEEEEe--cCCCcEEEEECCCCc
Q 014934 346 HGLLASGGGTADR--CIRFWNTTTNTHLSCMDT-GSQVCNLVWSKNVNELVSTHG--YSQNQIIVWRYPTMS 412 (415)
Q Consensus 346 ~~llasggg~~d~--~I~iwd~~t~~~~~~~~~-~~~V~~l~~s~~~~~l~s~~g--~~dg~I~vw~~~s~~ 412 (415)
.++++.. .|+ .|.+||+.+|+.+..+.. ...+..+.+++++..++.+.. ...+.|.+||+.+++
T Consensus 348 -~lv~~~~--~~g~~~l~~~~~~~g~~~~~l~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~ 416 (710)
T 2xdw_A 348 -FLVLCYL--HDVKNTLQLHDLATGALLKIFPLEVGSVVGYSGQKKDTEIFYQFTSFLSPGIIYHCDLTKEE 416 (710)
T ss_dssp -EEEEEEE--ETTEEEEEEEETTTCCEEEEECCCSSEEEEEECCTTCSEEEEEEECSSCCCEEEEEETTSSS
T ss_pred -EEEEEEE--ECCEEEEEEEECCCCCEEEecCCCCceEEEEecCCCCCEEEEEEeCCCCCCEEEEEECCCCc
Confidence 4777765 566 467788878887777653 456888999999987775422 235789999998765
No 171
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.67 E-value=4e-14 Score=130.01 Aligned_cols=237 Identities=11% Similarity=-0.000 Sum_probs=165.2
Q ss_pred cceeEeecCC-CcEEE-E-EcCCeEEEEECCCCCeEEeEecCCCCCeEEEEEcCCCCeEEEEECCCcEEEEECCCCeeeE
Q 014934 168 FYLNLVDWSS-HNVLA-V-GLGNCVYLWNACSSKVTKLCDLGIDDSVCSVGWANRNTHLAVGTSHGKVQIWDASRCKRVR 244 (415)
Q Consensus 168 ~~i~~l~ws~-~~~la-~-~~d~~V~iwd~~~~~~~~~~~~~~~~~V~~v~~sp~g~~la~g~~dg~V~iwd~~~~~~~~ 244 (415)
+....+++++ +++++ + ..++.|++|+..+...... .......+.+++++++|+++++.. ++.|.+||...... .
T Consensus 24 ~~p~~i~~~~~g~l~v~~~~~~~~i~~~~~~~~~~~~~-~~~~~~~p~~i~~~~~g~l~v~~~-~~~i~~~d~~~~~~-~ 100 (270)
T 1rwi_B 24 LSPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTVL-PFNGLYQPQGLAVDGAGTVYVTDF-NNRVVTLAAGSNNQ-T 100 (270)
T ss_dssp CCEEEEEECTTCCEEEEECSSSCEEEEECC-----EEC-CCCSCCSCCCEEECTTCCEEEEET-TTEEEEECTTCSCC-E
T ss_pred CCccceEECCCCCEEEEccCCCCcEEEecCCCcccceE-eeCCcCCcceeEECCCCCEEEEcC-CCEEEEEeCCCceE-e
Confidence 3677888988 66555 4 2468999999866554322 223345788999999999555544 88999999876543 3
Q ss_pred Eec-CCCccEEEEEee--CCEEEEEeCCCcEEEEECCCCCccEEEeccccCCeEEEEEeCCCCEEEEEeCCCcEEEEECC
Q 014934 245 TME-GHRLRVGALAWS--SSLLSSGSRDKSILQRDIRAQEDFVSKLSGHKSEVCGLKWSYDNRELASGGNDNRLFVWNQH 321 (415)
Q Consensus 245 ~l~-~h~~~V~~l~~~--~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~spdg~~lasg~~dg~I~iwd~~ 321 (415)
.+. .....+.+++++ ++++++...++.|.+||...... ..........+.+++++++|+++++...++.|.+||..
T Consensus 101 ~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~-~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~ 179 (270)
T 1rwi_B 101 VLPFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQ-TVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAE 179 (270)
T ss_dssp ECCCCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSC-EECCCCSCCSCCCEEECTTCCEEEEEGGGTEEEEECTT
T ss_pred eeecCCcCCCcceEECCCCCEEEEECCCCEEEEEECCCcee-EeeccccCCCceeEEEeCCCCEEEEECCCCEEEEEecC
Confidence 333 233568899997 45666666788999998665442 22222333467889999999988887778899999988
Q ss_pred CCceeEEeccCCCcEEEEEEcCCCCcEEEEEcCCCCCeEEEEECCCCcEEEEeeC-CCCEEEEEECCCCCeEEEEEecCC
Q 014934 322 STQPVLKYCEHTAAVKAIAWSPHLHGLLASGGGTADRCIRFWNTTTNTHLSCMDT-GSQVCNLVWSKNVNELVSTHGYSQ 400 (415)
Q Consensus 322 ~~~~~~~~~~h~~~V~~l~~sp~~~~llasggg~~d~~I~iwd~~t~~~~~~~~~-~~~V~~l~~s~~~~~l~s~~g~~d 400 (415)
..........+...+.++++.++| .++++.. .++.|.+||..+......... ...+.+++++++|+.+++ ...+
T Consensus 180 ~~~~~~~~~~~~~~p~~i~~d~~g-~l~v~~~--~~~~v~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~--~~~~ 254 (270)
T 1rwi_B 180 SNNQVVLPFTDITAPWGIAVDEAG-TVYVTEH--NTNQVVKLLAGSTTSTVLPFTGLNTPLAVAVDSDRTVYVA--DRGN 254 (270)
T ss_dssp TCCEEECCCSSCCSEEEEEECTTC-CEEEEET--TTSCEEEECTTCSCCEECCCCSCSCEEEEEECTTCCEEEE--EGGG
T ss_pred CCceEeecccCCCCceEEEECCCC-CEEEEEC--CCCcEEEEcCCCCcceeeccCCCCCceeEEECCCCCEEEE--ECCC
Confidence 765544333344678999999998 4777765 578999999876554332222 357899999999986666 5678
Q ss_pred CcEEEEECCCCcc
Q 014934 401 NQIIVWRYPTMSK 413 (415)
Q Consensus 401 g~I~vw~~~s~~~ 413 (415)
+.|.+++....+.
T Consensus 255 ~~v~~~~~~~~~~ 267 (270)
T 1rwi_B 255 DRVVKLTSLEHHH 267 (270)
T ss_dssp TEEEEECCCGGGS
T ss_pred CEEEEEcCCCccc
Confidence 9999999987554
No 172
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.67 E-value=3.9e-15 Score=154.93 Aligned_cols=231 Identities=11% Similarity=-0.021 Sum_probs=162.0
Q ss_pred cceeEeecCCCcEEEEEc----CCeEEEEECC-CCCeEEeEecCCCCCeE---------EEEEc--CCCCe-EEEEEC-C
Q 014934 168 FYLNLVDWSSHNVLAVGL----GNCVYLWNAC-SSKVTKLCDLGIDDSVC---------SVGWA--NRNTH-LAVGTS-H 229 (415)
Q Consensus 168 ~~i~~l~ws~~~~la~~~----d~~V~iwd~~-~~~~~~~~~~~~~~~V~---------~v~~s--p~g~~-la~g~~-d 229 (415)
..+..+.|+++.++.+.. ++...||... +++...+. .+...+. .+.|+ |||++ |+.+.. +
T Consensus 24 ~~~~~~~~s~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~--~~~~~~~~~~~~~~~~~~~~~~SPDg~~~la~~~~~~ 101 (662)
T 3azo_A 24 GRPACVGAVGDEVWWVAPRPAEAGRATLVRRRADGAEESAL--PAPWNVRNRVFEYSGFPWAGVPRPAGGPLLVFTHFGD 101 (662)
T ss_dssp SCCEEEEEETTEEEEEEEETTTTTEEEEEEECTTSCEEESS--CTTCCBCCCGGGTCCCCEEEECCSSSSCEEEEEBTTT
T ss_pred CccceeEEcCCeEEEEecCcccCCcEEEEEECCCCCcceeC--CCCccccccccccCCccceeeeecCCCeEEEEEECCC
Confidence 357788899865554443 5678888843 44443333 4445555 56666 99998 776654 4
Q ss_pred CcEEEEECC--CCeeeEEecC-----CCccEEEEEee--CCEEEEEeCC----------CcEEEEECCC------CCccE
Q 014934 230 GKVQIWDAS--RCKRVRTMEG-----HRLRVGALAWS--SSLLSSGSRD----------KSILQRDIRA------QEDFV 284 (415)
Q Consensus 230 g~V~iwd~~--~~~~~~~l~~-----h~~~V~~l~~~--~~~l~sgs~d----------g~I~iwd~~~------~~~~~ 284 (415)
..|.+|++. .......+.. |...+..++|+ ++.|++++.+ ..|++||+.+ +. .
T Consensus 102 ~~l~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~--~ 179 (662)
T 3azo_A 102 QRLYAFEPDAPGGAVPRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSA--V 179 (662)
T ss_dssp CCEEEECTTSTTCCCCEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGG--S
T ss_pred CeEEEEcCCCCCCCCCEeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCc--e
Confidence 556666665 2034555665 67789999999 4688888776 5899999987 43 3
Q ss_pred EEec-cccCCeEEEEEeCCCCEEEEEeCC--------CcEEEEECC-CC---ceeEEeccCCCcEEEEEEcCCCCcEEEE
Q 014934 285 SKLS-GHKSEVCGLKWSYDNRELASGGND--------NRLFVWNQH-ST---QPVLKYCEHTAAVKAIAWSPHLHGLLAS 351 (415)
Q Consensus 285 ~~~~-~h~~~V~~l~~spdg~~lasg~~d--------g~I~iwd~~-~~---~~~~~~~~h~~~V~~l~~sp~~~~llas 351 (415)
..+. .+...+..++|+|||++||.++.+ ..|++||+. ++ +......+|...+..++|+|+|+ ++++
T Consensus 180 ~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~-l~~~ 258 (662)
T 3azo_A 180 RELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGS-LIVA 258 (662)
T ss_dssp EESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSC-EEEE
T ss_pred eEEEecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEcceEECCCCe-EEEE
Confidence 4555 566778889999999999987755 379999998 56 44444445678899999999999 7777
Q ss_pred EcCCCCC--eEEEEECCCCcEEEEeeCCCC---------EEEEEECCCCCeEEEEEecCCCcEEEEEC
Q 014934 352 GGGTADR--CIRFWNTTTNTHLSCMDTGSQ---------VCNLVWSKNVNELVSTHGYSQNQIIVWRY 408 (415)
Q Consensus 352 ggg~~d~--~I~iwd~~t~~~~~~~~~~~~---------V~~l~~s~~~~~l~s~~g~~dg~I~vw~~ 408 (415)
+. .++ .|.+||+.+++.......... +..++|+++++.+++ +.. +.+.||.+
T Consensus 259 ~~--~~~~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~--~~~-~~~~l~~~ 321 (662)
T 3azo_A 259 TD--RTGWWNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVV--HGK-GAAVLGIL 321 (662)
T ss_dssp EC--TTSSCEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEE--EBS-SSCEEEEE
T ss_pred EC--CCCCeEEEEEECCCCceeecccccccccCccccccCceEeEeCCCEEEEE--EEc-CccEEEEE
Confidence 75 567 677778777776544432211 457889999998877 556 88888844
No 173
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.67 E-value=1e-14 Score=139.06 Aligned_cols=219 Identities=8% Similarity=0.076 Sum_probs=151.0
Q ss_pred ceeEeecCC-CcEEEEEcC----C--eEEEEECCCCCeEEeEecCCCCCeEEEEEcCCCCeEEEEECC------------
Q 014934 169 YLNLVDWSS-HNVLAVGLG----N--CVYLWNACSSKVTKLCDLGIDDSVCSVGWANRNTHLAVGTSH------------ 229 (415)
Q Consensus 169 ~i~~l~ws~-~~~la~~~d----~--~V~iwd~~~~~~~~~~~~~~~~~V~~v~~sp~g~~la~g~~d------------ 229 (415)
.+..+.||| ++.|++... + .|++|++.+++...+.... . +.++.|+|||+.|+.++.+
T Consensus 60 ~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~--~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~ 136 (347)
T 2gop_A 60 NATMPRISPDGKKIAFMRANEEKKVSEIWVADLETLSSKKILEAK--N-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDD 136 (347)
T ss_dssp SCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTEEEEEEEES--E-EEEEEECTTSSEEEEEEECCCC---------
T ss_pred cCCCeEECCCCCEEEEEEeccCCCcceEEEEECCCCceEEEEcCC--C-ccceeECCCCCEEEEEEccCCCcCCcEEEcc
Confidence 356789999 677776632 3 4899999988877766532 3 9999999999999888642
Q ss_pred ---------------CcEEEEECCCCeeeEEecCCCccEEEEEeeCC-EEEEEeCCC-------cEEEEECCCCCccEEE
Q 014934 230 ---------------GKVQIWDASRCKRVRTMEGHRLRVGALAWSSS-LLSSGSRDK-------SILQRDIRAQEDFVSK 286 (415)
Q Consensus 230 ---------------g~V~iwd~~~~~~~~~l~~h~~~V~~l~~~~~-~l~sgs~dg-------~I~iwd~~~~~~~~~~ 286 (415)
..|.+||+.+++.+..+.. . .+..++|+++ +++++..++ ...+|.+.++. ...
T Consensus 137 ~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~-~-~~~~~~~spdg~~~~~~~~~~~~~~~~~~~l~~~d~~~--~~~ 212 (347)
T 2gop_A 137 VPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEK-P-RFSSGIWHRDKIVVNVPHREIIPQYFKFWDIYIWEDGK--EEK 212 (347)
T ss_dssp CCCC---------CEEEEEEEETTTTEEEEEEEE-E-TTCEEEEETTEEEEEEECCCSSCCSSCCEEEEEEETTE--EEE
T ss_pred cceeecCcccccCccceEEEEECCCCeEEeeecC-C-CcccccCCCCeEEEEEecccccccccccccEEEeCCCc--eEE
Confidence 5699999998876455544 3 6788899854 666665542 33444444332 334
Q ss_pred eccccCCeEEEEEeCCCCEEEEEeCC--------CcEEEEECCCCceeEEeccCCCcEEE-EEEcCCCCcEEEEEcCCCC
Q 014934 287 LSGHKSEVCGLKWSYDNRELASGGND--------NRLFVWNQHSTQPVLKYCEHTAAVKA-IAWSPHLHGLLASGGGTAD 357 (415)
Q Consensus 287 ~~~h~~~V~~l~~spdg~~lasg~~d--------g~I~iwd~~~~~~~~~~~~h~~~V~~-l~~sp~~~~llasggg~~d 357 (415)
+..+ ..+..+ +|||++|+.++.+ ..|++|| +++.......|...+.. ++|+ ++ ++++++ .+
T Consensus 213 l~~~-~~~~~~--spdg~~l~~~~~~~~~~~~~~~~l~~~d--~~~~~~l~~~~~~~~~~~~~~s-dg--~~~~~~--~~ 282 (347)
T 2gop_A 213 MFEK-VSFYAV--DSDGERILLYGKPEKKYMSEHNKLYIYD--GKEVMGILDEVDRGVGQAKIKD-GK--VYFTLF--EE 282 (347)
T ss_dssp EEEE-ESEEEE--EECSSCEEEEECCSSSCCCSSCEEEEEC--SSCEEESSTTCCSEEEEEEEET-TE--EEEEEE--ET
T ss_pred eccC-cceeeE--CCCCCEEEEEEccccCCccccceEEEEC--CCceEeccccCCcccCCccEEc-Cc--EEEEEe--cC
Confidence 4444 555544 9999999887754 3688888 55554444456778886 9999 76 777665 78
Q ss_pred CeEEEEECCCCcEEEEeeCCCCEEEEEECCCCCeEEEEEecCCCcE-EEEECC
Q 014934 358 RCIRFWNTTTNTHLSCMDTGSQVCNLVWSKNVNELVSTHGYSQNQI-IVWRYP 409 (415)
Q Consensus 358 ~~I~iwd~~t~~~~~~~~~~~~V~~l~~s~~~~~l~s~~g~~dg~I-~vw~~~ 409 (415)
+.+++| +.+++....+.....|.++.|++ ..+++ +..++.. .||.+.
T Consensus 283 ~~~~l~-~~~g~~~~~~~~~~~v~~~~~s~--~~~~~--~~~~~~~~~l~~~~ 330 (347)
T 2gop_A 283 GSVNLY-IWDGEIKPIAKGRHWIMGFDVDE--IVVYL--KETATRLRELFTWD 330 (347)
T ss_dssp TEEEEE-EESSSEEEEECSSSEEEEEEESS--SEEEE--EECSSSCCEEEEES
T ss_pred CcEEEE-EcCCceEEEecCCCeEEeeeeeC--cEEEE--EcCCCChHHheEeC
Confidence 999999 87777655555666789999999 45554 3344443 666654
No 174
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.65 E-value=1.5e-13 Score=127.92 Aligned_cols=210 Identities=12% Similarity=0.038 Sum_probs=161.6
Q ss_pred CCCcEEEEEc-CCeEEEEECCCCCeEEeEecCCCCCeEEEEEcCCCCeEEEEECCCcEEEEECCCCeeeEEecCC-CccE
Q 014934 176 SSHNVLAVGL-GNCVYLWNACSSKVTKLCDLGIDDSVCSVGWANRNTHLAVGTSHGKVQIWDASRCKRVRTMEGH-RLRV 253 (415)
Q Consensus 176 s~~~~la~~~-d~~V~iwd~~~~~~~~~~~~~~~~~V~~v~~sp~g~~la~g~~dg~V~iwd~~~~~~~~~l~~h-~~~V 253 (415)
+|+++|+++. ++.|++||.++++....+..+....+.++.++|+|++|+ +.++.|..||. +++.+..+..+ ...+
T Consensus 3 ~~~~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~ilv--s~~~~V~~~d~-~G~~~W~~~~~~~~~~ 79 (276)
T 3no2_A 3 SPQHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILF--SYSKGAKMITR-DGRELWNIAAPAGCEM 79 (276)
T ss_dssp CCCEEEEECTTCSEEEEEETTTTEEEEEEECCTTCCCCEEEECTTSCEEE--ECBSEEEEECT-TSCEEEEEECCTTCEE
T ss_pred CCCcEEEeeCCCCEEEEEECCCCeEEEEeCCCccCCCcCeEECCCCCEEE--eCCCCEEEECC-CCCEEEEEcCCCCccc
Confidence 4677888874 789999999999988777643224789999999999888 45778999999 88888888764 3467
Q ss_pred EEEEee--CCEEEEEeC-CCcEEEEECCCCCccEEEec------cccCCeEEEEEeCCCCEEEEEeCCCcEEEEECCCCc
Q 014934 254 GALAWS--SSLLSSGSR-DKSILQRDIRAQEDFVSKLS------GHKSEVCGLKWSYDNRELASGGNDNRLFVWNQHSTQ 324 (415)
Q Consensus 254 ~~l~~~--~~~l~sgs~-dg~I~iwd~~~~~~~~~~~~------~h~~~V~~l~~spdg~~lasg~~dg~I~iwd~~~~~ 324 (415)
.++.+. ++++++.+. ++.|..+|. .++ .+..+. .+......+++.++|++|++...++.|.+||.. ++
T Consensus 80 ~~~~~~~dG~~lv~~~~~~~~v~~vd~-~Gk-~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~-G~ 156 (276)
T 3no2_A 80 QTARILPDGNALVAWCGHPSTILEVNM-KGE-VLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAPN-GQ 156 (276)
T ss_dssp EEEEECTTSCEEEEEESTTEEEEEECT-TSC-EEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTTEEEEECTT-SC
T ss_pred cccEECCCCCEEEEecCCCCEEEEEeC-CCC-EEEEEeccCCCCcccccccCceECCCCCEEEEecCCCEEEEECCC-CC
Confidence 777766 678888777 777888876 333 333332 222345567889999999999999999999998 99
Q ss_pred eeEEeccCCCcEEEEEEcCCCCcEEEEEcCCCCCeEEEEECCCCcEEEEeeCC-------CCEEEEEECCCCCeEEEE
Q 014934 325 PVLKYCEHTAAVKAIAWSPHLHGLLASGGGTADRCIRFWNTTTNTHLSCMDTG-------SQVCNLVWSKNVNELVST 395 (415)
Q Consensus 325 ~~~~~~~h~~~V~~l~~sp~~~~llasggg~~d~~I~iwd~~t~~~~~~~~~~-------~~V~~l~~s~~~~~l~s~ 395 (415)
.+.++..+ ..+.++...+++. +++++. .++.|..+|..+|+.+..+... ..+..+...++|+.+++.
T Consensus 157 ~~w~~~~~-~~~~~~~~~~~g~-~~v~~~--~~~~v~~~d~~tG~~~w~~~~~~~~~~~l~~~~~~~~~~~G~i~v~~ 230 (276)
T 3no2_A 157 LLNSVKLS-GTPFSSAFLDNGD-CLVACG--DAHCFVQLNLESNRIVRRVNANDIEGVQLFFVAQLFPLQNGGLYICN 230 (276)
T ss_dssp EEEEEECS-SCCCEEEECTTSC-EEEECB--TTSEEEEECTTTCCEEEEEEGGGSBSCCCSEEEEEEECTTSCEEEEE
T ss_pred EEEEEECC-CCccceeEcCCCC-EEEEeC--CCCeEEEEeCcCCcEEEEecCCCCCCccccccccceEcCCCCEEEEe
Confidence 99998654 4556778888887 555554 5778999999999999888621 227889999999988885
No 175
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.64 E-value=2.1e-13 Score=127.47 Aligned_cols=227 Identities=11% Similarity=0.059 Sum_probs=161.6
Q ss_pred ceeEeecCC-Cc-EEEEE-cCCeEEEEECCCCCeEEeEecCCCCCeEEEEEcCCCCeEEEEECCCcEEEEECCCCeeeEE
Q 014934 169 YLNLVDWSS-HN-VLAVG-LGNCVYLWNACSSKVTKLCDLGIDDSVCSVGWANRNTHLAVGTSHGKVQIWDASRCKRVRT 245 (415)
Q Consensus 169 ~i~~l~ws~-~~-~la~~-~d~~V~iwd~~~~~~~~~~~~~~~~~V~~v~~sp~g~~la~g~~dg~V~iwd~~~~~~~~~ 245 (415)
....+.|++ ++ +++++ .++.|+.|+..++ . ..+. .+...+.+++++++|+++++...++.|.+||..+++....
T Consensus 29 ~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~-~-~~~~-~~~~~~~~l~~~~dg~l~v~~~~~~~i~~~d~~~g~~~~~ 105 (296)
T 3e5z_A 29 WTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ-L-SPEM-HPSHHQNGHCLNKQGHLIACSHGLRRLERQREPGGEWESI 105 (296)
T ss_dssp SEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC-E-EEEE-SSCSSEEEEEECTTCCEEEEETTTTEEEEECSTTCCEEEE
T ss_pred cccCCeEeCCCCEEEEEeCCCCEEEEEECCCC-e-EEEE-CCCCCcceeeECCCCcEEEEecCCCeEEEEcCCCCcEEEE
Confidence 467899999 66 67776 4689999999887 3 4443 4567899999999999877766678999999988765443
Q ss_pred ecCC----CccEEEEEee--CCEEEE----Ee-------------CCCcEEEEECCCCCccEEEeccccCCeEEEEEeCC
Q 014934 246 MEGH----RLRVGALAWS--SSLLSS----GS-------------RDKSILQRDIRAQEDFVSKLSGHKSEVCGLKWSYD 302 (415)
Q Consensus 246 l~~h----~~~V~~l~~~--~~~l~s----gs-------------~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~spd 302 (415)
.... ...+..++++ ++++++ |+ ..+.|..+|.. +. ...+..+.....+++|+|+
T Consensus 106 ~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~--~~~~~~~~~~~~gi~~s~d 182 (296)
T 3e5z_A 106 ADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GT--LSAPIRDRVKPNGLAFLPS 182 (296)
T ss_dssp ECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SC--EEEEECCCSSEEEEEECTT
T ss_pred eeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CC--EEEeecCCCCCccEEECCC
Confidence 3221 1235567887 466666 32 13456666655 32 4445556677899999999
Q ss_pred CCEEEEEeCCCcEEEEECC-CCce---eEEeccCCCcEEEEEEcCCCCcEEEEEcCCCCCeEEEEECCCCcEEEEeeCCC
Q 014934 303 NRELASGGNDNRLFVWNQH-STQP---VLKYCEHTAAVKAIAWSPHLHGLLASGGGTADRCIRFWNTTTNTHLSCMDTGS 378 (415)
Q Consensus 303 g~~lasg~~dg~I~iwd~~-~~~~---~~~~~~h~~~V~~l~~sp~~~~llasggg~~d~~I~iwd~~t~~~~~~~~~~~ 378 (415)
++.|++.+.++.|.+||+. +++. ...+..+...+.++++.++|. ++++. ++.|.+||.. ++.+..+....
T Consensus 183 g~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~~G~-l~v~~----~~~v~~~~~~-g~~~~~~~~~~ 256 (296)
T 3e5z_A 183 GNLLVSDTGDNATHRYCLNARGETEYQGVHFTVEPGKTDGLRVDAGGL-IWASA----GDGVHVLTPD-GDELGRVLTPQ 256 (296)
T ss_dssp SCEEEEETTTTEEEEEEECSSSCEEEEEEEECCSSSCCCSEEEBTTSC-EEEEE----TTEEEEECTT-SCEEEEEECSS
T ss_pred CCEEEEeCCCCeEEEEEECCCCcCcCCCeEeeCCCCCCCeEEECCCCC-EEEEc----CCeEEEECCC-CCEEEEEECCC
Confidence 9999777788999999987 4544 233334556677899999997 66654 5789999986 77777776544
Q ss_pred CEEEEEE-CCCCCeEEEEEecCCCcEEEEECCC
Q 014934 379 QVCNLVW-SKNVNELVSTHGYSQNQIIVWRYPT 410 (415)
Q Consensus 379 ~V~~l~~-s~~~~~l~s~~g~~dg~I~vw~~~s 410 (415)
.+.+++| +++++.|+++ .. +.|..++..+
T Consensus 257 ~~~~~~f~~~d~~~L~v~--t~-~~l~~~~~~~ 286 (296)
T 3e5z_A 257 TTSNLCFGGPEGRTLYMT--VS-TEFWSIETNV 286 (296)
T ss_dssp CCCEEEEESTTSCEEEEE--ET-TEEEEEECSC
T ss_pred CceeEEEECCCCCEEEEE--cC-CeEEEEEccc
Confidence 4889999 6899988884 33 3555555554
No 176
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.63 E-value=6.6e-13 Score=125.89 Aligned_cols=219 Identities=9% Similarity=0.084 Sum_probs=154.8
Q ss_pred ceeEeecCC-CcEEEEE-cCCeEEEEECCCCCeEEeEecCCCCCeEEEEEcCCCCeEEEEECC----CcEEEEECCCCee
Q 014934 169 YLNLVDWSS-HNVLAVG-LGNCVYLWNACSSKVTKLCDLGIDDSVCSVGWANRNTHLAVGTSH----GKVQIWDASRCKR 242 (415)
Q Consensus 169 ~i~~l~ws~-~~~la~~-~d~~V~iwd~~~~~~~~~~~~~~~~~V~~v~~sp~g~~la~g~~d----g~V~iwd~~~~~~ 242 (415)
.+..++|++ +++++++ .++.|++||..+++...... .+...+.+++|+++|++++++..+ +.|.+||..+++.
T Consensus 46 ~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~~~~~-~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~ 124 (333)
T 2dg1_A 46 QLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRPFV-SHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNL 124 (333)
T ss_dssp CEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEE-CSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSC
T ss_pred cccCcEECCCCCEEEEECCCCEEEEEeCCCCcEEEEee-CCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEE
Confidence 467899998 6666666 46899999999988766553 456789999999999977776665 6899999987765
Q ss_pred eEEec--CCCccEEEEEee--CCEEEEEeC------CCcEEEEECCCCCccEEEeccccCCeEEEEEeCCCCEEE-EEeC
Q 014934 243 VRTME--GHRLRVGALAWS--SSLLSSGSR------DKSILQRDIRAQEDFVSKLSGHKSEVCGLKWSYDNRELA-SGGN 311 (415)
Q Consensus 243 ~~~l~--~h~~~V~~l~~~--~~~l~sgs~------dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~spdg~~la-sg~~ 311 (415)
...+. .+...+.+++++ +.++++... .+.|..+|..... ...+..+...+.+++|+|+|+.|+ +...
T Consensus 125 ~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~--~~~~~~~~~~~~~i~~~~dg~~l~v~~~~ 202 (333)
T 2dg1_A 125 QDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRT--VTPIIQNISVANGIALSTDEKVLWVTETT 202 (333)
T ss_dssp EEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCC--EEEEEEEESSEEEEEECTTSSEEEEEEGG
T ss_pred EEEEccCccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCE--EEEeecCCCcccceEECCCCCEEEEEeCC
Confidence 43333 244578999998 345555443 3556666665443 233333445688999999998665 4456
Q ss_pred CCcEEEEECCC-CceeEE--------eccCCCcEEEEEEcCCCCcEEEEEcCCCCCeEEEEECCCCcEEEEeeCCC----
Q 014934 312 DNRLFVWNQHS-TQPVLK--------YCEHTAAVKAIAWSPHLHGLLASGGGTADRCIRFWNTTTNTHLSCMDTGS---- 378 (415)
Q Consensus 312 dg~I~iwd~~~-~~~~~~--------~~~h~~~V~~l~~sp~~~~llasggg~~d~~I~iwd~~t~~~~~~~~~~~---- 378 (415)
++.|.+||+.+ +..+.. +.++ ..+..++++++|. ++++.. .++.|.+||. +++.+..+....
T Consensus 203 ~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~-~~~~~i~~d~~G~-l~v~~~--~~~~v~~~d~-~g~~~~~~~~~~~~~g 277 (333)
T 2dg1_A 203 ANRLHRIALEDDGVTIQPFGATIPYYFTGH-EGPDSCCIDSDDN-LYVAMY--GQGRVLVFNK-RGYPIGQILIPGRDEG 277 (333)
T ss_dssp GTEEEEEEECTTSSSEEEEEEEEEEECCSS-SEEEEEEEBTTCC-EEEEEE--TTTEEEEECT-TSCEEEEEECTTGGGT
T ss_pred CCeEEEEEecCCCcCcccccceEEEecCCC-CCCCceEECCCCC-EEEEEc--CCCEEEEECC-CCCEEEEEEcCCCccc
Confidence 78999999864 333221 1122 4678899999987 666554 4789999998 577777775432
Q ss_pred ---CEEEEEECCCCCeEEEE
Q 014934 379 ---QVCNLVWSKNVNELVST 395 (415)
Q Consensus 379 ---~V~~l~~s~~~~~l~s~ 395 (415)
.+.+++|+++++.|+++
T Consensus 278 ~~~~~~~~~~~~dg~~L~v~ 297 (333)
T 2dg1_A 278 HMLRSTHPQFIPGTNQLIIC 297 (333)
T ss_dssp CSCBCCEEEECTTSCEEEEE
T ss_pred cccCcceEEECCCCCEEEEE
Confidence 58899999998777664
No 177
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.63 E-value=1.3e-13 Score=131.28 Aligned_cols=231 Identities=9% Similarity=-0.033 Sum_probs=169.4
Q ss_pred eeEeecCCCcEEEEEc-CCeEEEEECCCCCeEEeEecCCCCCeEEEEEcCCCCeEEEEE-CCCcEEEEECCCCeeeEEec
Q 014934 170 LNLVDWSSHNVLAVGL-GNCVYLWNACSSKVTKLCDLGIDDSVCSVGWANRNTHLAVGT-SHGKVQIWDASRCKRVRTME 247 (415)
Q Consensus 170 i~~l~ws~~~~la~~~-d~~V~iwd~~~~~~~~~~~~~~~~~V~~v~~sp~g~~la~g~-~dg~V~iwd~~~~~~~~~l~ 247 (415)
...+.+..+.+.++.. ++.|.+||..+++....+. .......++++++|+ +.++. .++.|.+||..+++....+.
T Consensus 46 ~~~i~~~~~~lyv~~~~~~~v~viD~~t~~~~~~i~--~~~~p~~i~~~~~g~-lyv~~~~~~~v~~iD~~t~~~~~~i~ 122 (328)
T 3dsm_A 46 AQSMVIRDGIGWIVVNNSHVIFAIDINTFKEVGRIT--GFTSPRYIHFLSDEK-AYVTQIWDYRIFIINPKTYEITGYIE 122 (328)
T ss_dssp EEEEEEETTEEEEEEGGGTEEEEEETTTCCEEEEEE--CCSSEEEEEEEETTE-EEEEEBSCSEEEEEETTTTEEEEEEE
T ss_pred ceEEEEECCEEEEEEcCCCEEEEEECcccEEEEEcC--CCCCCcEEEEeCCCe-EEEEECCCCeEEEEECCCCeEEEEEE
Confidence 3455565666666664 6899999999999877764 346789999999985 55555 78999999999998877665
Q ss_pred CCC-----ccEEEEEeeCCEEEEEe--CCCcEEEEECCCCCccEEEeccccCCeEEEEEeCCCCEEEEEeCC--------
Q 014934 248 GHR-----LRVGALAWSSSLLSSGS--RDKSILQRDIRAQEDFVSKLSGHKSEVCGLKWSYDNRELASGGND-------- 312 (415)
Q Consensus 248 ~h~-----~~V~~l~~~~~~l~sgs--~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~spdg~~lasg~~d-------- 312 (415)
... .....|++.+..|+++. .++.|.++|+.+.+ ....+.. .....+++++|+|++++++..+
T Consensus 123 ~g~~~~~~~~p~~i~~~~~~lyv~~~~~~~~v~viD~~t~~-~~~~i~~-g~~p~~i~~~~dG~l~v~~~~~~~~~~~~~ 200 (328)
T 3dsm_A 123 CPDMDMESGSTEQMVQYGKYVYVNCWSYQNRILKIDTETDK-VVDELTI-GIQPTSLVMDKYNKMWTITDGGYEGSPYGY 200 (328)
T ss_dssp CTTCCTTTCBCCCEEEETTEEEEEECTTCCEEEEEETTTTE-EEEEEEC-SSCBCCCEECTTSEEEEEBCCBCTTCSSCB
T ss_pred cCCccccCCCcceEEEECCEEEEEcCCCCCEEEEEECCCCe-EEEEEEc-CCCccceEEcCCCCEEEEECCCccCCcccc
Confidence 332 14556666777776666 48899999999876 3444443 3346788999999987776654
Q ss_pred --CcEEEEECCCCceeEEeccC-CCcEEEEEEcCCCCcEEEEEcCCCCCeEEEEECCCCcEEEE--eeC-CCCEEEEEEC
Q 014934 313 --NRLFVWNQHSTQPVLKYCEH-TAAVKAIAWSPHLHGLLASGGGTADRCIRFWNTTTNTHLSC--MDT-GSQVCNLVWS 386 (415)
Q Consensus 313 --g~I~iwd~~~~~~~~~~~~h-~~~V~~l~~sp~~~~llasggg~~d~~I~iwd~~t~~~~~~--~~~-~~~V~~l~~s 386 (415)
+.|.+||..+++....+... ......++|+|+++.++++. +.|.+||+.+++.... +.. .....+++++
T Consensus 201 ~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~~~lyv~~-----~~v~~~d~~t~~~~~~~~~~~~~~~p~gi~vd 275 (328)
T 3dsm_A 201 EAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRDTLYWIN-----NDIWRMPVEADRVPVRPFLEFRDTKYYGLTVN 275 (328)
T ss_dssp CCCEEEEEETTTTEEEEEEECCTTCCCEEEEECTTSCEEEEES-----SSEEEEETTCSSCCSSCSBCCCSSCEEEEEEC
T ss_pred CCceEEEEECCCCeEEEEEecCCCCCceeEEEecCCCEEEEEc-----cEEEEEECCCCceeeeeeecCCCCceEEEEEc
Confidence 78999999998877666432 24689999999998777643 3899999998876421 222 4678999999
Q ss_pred CCCCeEEEEEe----cCCCcEEEEECCCCc
Q 014934 387 KNVNELVSTHG----YSQNQIIVWRYPTMS 412 (415)
Q Consensus 387 ~~~~~l~s~~g----~~dg~I~vw~~~s~~ 412 (415)
|++..|.++ . ..++.|.+|+.. ++
T Consensus 276 p~~g~lyva-~~~~y~~~~~V~v~d~~-g~ 303 (328)
T 3dsm_A 276 PNNGEVYVA-DAIDYQQQGIVYRYSPQ-GK 303 (328)
T ss_dssp TTTCCEEEE-ECTTSSSEEEEEEECTT-CC
T ss_pred CCCCeEEEE-cccccccCCEEEEECCC-CC
Confidence 955555554 4 457899999987 54
No 178
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.63 E-value=1.8e-14 Score=149.97 Aligned_cols=234 Identities=8% Similarity=-0.024 Sum_probs=158.4
Q ss_pred EeecC--C-CcE-EEEEcC--CeEEEEECC--C-CCeEEeEecC---CCCCeEEEEEcCCCCeEEEEECC----------
Q 014934 172 LVDWS--S-HNV-LAVGLG--NCVYLWNAC--S-SKVTKLCDLG---IDDSVCSVGWANRNTHLAVGTSH---------- 229 (415)
Q Consensus 172 ~l~ws--~-~~~-la~~~d--~~V~iwd~~--~-~~~~~~~~~~---~~~~V~~v~~sp~g~~la~g~~d---------- 229 (415)
...|+ | ++. |+.+.+ ..|++|+.. + ++...+.... +...+.+++|+|||+.|++++.+
T Consensus 81 ~~~~~~SPDg~~~la~~~~~~~~l~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~ 160 (662)
T 3azo_A 81 PWAGVPRPAGGPLLVFTHFGDQRLYAFEPDAPGGAVPRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVR 160 (662)
T ss_dssp CEEEECCSSSSCEEEEEBTTTCCEEEECTTSTTCCCCEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEE
T ss_pred cceeeeecCCCeEEEEEECCCCeEEEEcCCCCCCCCCEeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCce
Confidence 34455 6 666 777754 578888876 3 5554444322 55678999999999999998876
Q ss_pred CcEEEEECCC------CeeeEEec-CCCccEEEEEee--CCEEEEEeCC--------CcEEEEECC-CCC--ccEEEecc
Q 014934 230 GKVQIWDASR------CKRVRTME-GHRLRVGALAWS--SSLLSSGSRD--------KSILQRDIR-AQE--DFVSKLSG 289 (415)
Q Consensus 230 g~V~iwd~~~------~~~~~~l~-~h~~~V~~l~~~--~~~l~sgs~d--------g~I~iwd~~-~~~--~~~~~~~~ 289 (415)
..|.+||+.+ ++ ...+. .+...+..++|+ ++.|+.++.+ ..|++||+. ++. .......+
T Consensus 161 ~~i~~~~~~~~~~~~~~~-~~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~ 239 (662)
T 3azo_A 161 RFLAAVPLDGSAAADRSA-VRELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGG 239 (662)
T ss_dssp EEEEEEETTSTTTTCGGG-SEESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEE
T ss_pred eEEEEEECCCCccccCCc-eeEEEecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCC
Confidence 5799999987 54 44555 666788889998 4678777654 379999998 451 23344445
Q ss_pred ccCCeEEEEEeCCCCEEEEEeCCC--cEEEEECCCCceeEEeccCCCc--------EEEEEEcCCCCcEEEEEcCCCCCe
Q 014934 290 HKSEVCGLKWSYDNRELASGGNDN--RLFVWNQHSTQPVLKYCEHTAA--------VKAIAWSPHLHGLLASGGGTADRC 359 (415)
Q Consensus 290 h~~~V~~l~~spdg~~lasg~~dg--~I~iwd~~~~~~~~~~~~h~~~--------V~~l~~sp~~~~llasggg~~d~~ 359 (415)
|...+..+.|+|||+++++++.++ .|++||+.+++.......+... +..++|+|++. +++++. . +.
T Consensus 240 ~~~~~~~~~~spdg~l~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~-~~~~~~--~-~~ 315 (662)
T 3azo_A 240 PEEAIAQAEWAPDGSLIVATDRTGWWNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLANGL-IAVVHG--K-GA 315 (662)
T ss_dssp TTBCEEEEEECTTSCEEEEECTTSSCEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTTSC-EEEEEB--S-SS
T ss_pred CCceEcceEECCCCeEEEEECCCCCeEEEEEECCCCceeecccccccccCccccccCceEeEeCCCE-EEEEEE--c-Cc
Confidence 578899999999999888888888 6778887677654333333222 46788999876 777775 5 88
Q ss_pred EEEE--ECCCCcEEEEee-CCCCEEEEEECCCCCeEEEEEecCCC--cEEEEECCCCc
Q 014934 360 IRFW--NTTTNTHLSCMD-TGSQVCNLVWSKNVNELVSTHGYSQN--QIIVWRYPTMS 412 (415)
Q Consensus 360 I~iw--d~~t~~~~~~~~-~~~~V~~l~~s~~~~~l~s~~g~~dg--~I~vw~~~s~~ 412 (415)
+++| |+.+++ +..+. +...+..+ |++++..++.+.++.+. .|.+|+..+.+
T Consensus 316 ~~l~~~d~~~~~-~~~l~~~~~~~~~~-~s~~~~~~~~~~~~~~~~~~i~~~d~~~g~ 371 (662)
T 3azo_A 316 AVLGILDPESGE-LVDAAGPWTEWAAT-LTVSGTRAVGVAASPRTAYEVVELDTVTGR 371 (662)
T ss_dssp CEEEEEETTTTE-EEECCSSCCEEEEE-EEEETTEEEEEEEETTEEEEEEEEETTTCC
T ss_pred cEEEEEECCCCc-EEEecCCCCeEEEE-EecCCCEEEEEEcCCCCCCEEEEEECCCCc
Confidence 8888 666665 45554 33445555 25566655554455554 45555555543
No 179
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.63 E-value=1.2e-13 Score=131.57 Aligned_cols=200 Identities=14% Similarity=0.174 Sum_probs=152.8
Q ss_pred CCeEEEEEcCCCCeEEEEECC------------------------CcEEEEECCCCeeeEEec-CCCccEEEEEee--CC
Q 014934 209 DSVCSVGWANRNTHLAVGTSH------------------------GKVQIWDASRCKRVRTME-GHRLRVGALAWS--SS 261 (415)
Q Consensus 209 ~~V~~v~~sp~g~~la~g~~d------------------------g~V~iwd~~~~~~~~~l~-~h~~~V~~l~~~--~~ 261 (415)
+.+.+|+++++|+++++...+ +.|.+||..+++.+..+. ++......++++ ++
T Consensus 24 ~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~g~ 103 (329)
T 3fvz_A 24 GQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNLFYLPHGLSIDTDGN 103 (329)
T ss_dssp SCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTTCSSEEEEEECTTSC
T ss_pred CCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCccCCceEEEECCCCC
Confidence 578999999999988877766 479999999888876664 455678899998 57
Q ss_pred EEEEEeCCCcEEEEECCCCCccEEEe---------ccccCCeEEEEEeC-CCCEEEEEe-CCCcEEEEECCCCceeEEec
Q 014934 262 LLSSGSRDKSILQRDIRAQEDFVSKL---------SGHKSEVCGLKWSY-DNRELASGG-NDNRLFVWNQHSTQPVLKYC 330 (415)
Q Consensus 262 ~l~sgs~dg~I~iwd~~~~~~~~~~~---------~~h~~~V~~l~~sp-dg~~lasg~-~dg~I~iwd~~~~~~~~~~~ 330 (415)
++++...++.|++||.......+..+ .++.....+|+++| ++.++++.+ .++.|++|| .+++.+..+.
T Consensus 104 l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~-~~g~~~~~~~ 182 (329)
T 3fvz_A 104 YWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFS-PSGKFVTQWG 182 (329)
T ss_dssp EEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEEC-TTSCEEEEEC
T ss_pred EEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEc-CCCCEEEEec
Confidence 88888889999999986553234444 24445789999999 888888886 689999999 5677777664
Q ss_pred c----------CCCcEEEEEEcCCCCcEEEEEcCCCCCeEEEEECCCCcEEEEee---CCCCEEEEEECC------CCCe
Q 014934 331 E----------HTAAVKAIAWSPHLHGLLASGGGTADRCIRFWNTTTNTHLSCMD---TGSQVCNLVWSK------NVNE 391 (415)
Q Consensus 331 ~----------h~~~V~~l~~sp~~~~llasggg~~d~~I~iwd~~t~~~~~~~~---~~~~V~~l~~s~------~~~~ 391 (415)
. +-.....|+++|++..++++.. .++.|++||..+|+.+..+. .+..+..++|+| +++.
T Consensus 183 ~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~--~~~~I~~~~~~~G~~~~~~~~~~~~~~~~~~~~~pg~~~~~~g~~ 260 (329)
T 3fvz_A 183 EESSGSSPRPGQFSVPHSLALVPHLDQLCVADR--ENGRIQCFKTDTKEFVREIKHASFGRNVFAISYIPGFLFAVNGKP 260 (329)
T ss_dssp EECCSSSCCTTEESCEEEEEEETTTTEEEEEET--TTTEEEEEETTTCCEEEEECCTTTTTCEEEEEEETTEEEEEECCC
T ss_pred cCCCCCCCCCcccCCCcEEEEECCCCEEEEEEC--CCCEEEEEECCCCcEEEEEeccccCCCcceeeecCCEEEEeCCCE
Confidence 2 2234899999999556888876 68999999999999988885 456788999999 3332
Q ss_pred EEEEEecCCCcEEEEECCCCcc
Q 014934 392 LVSTHGYSQNQIIVWRYPTMSK 413 (415)
Q Consensus 392 l~s~~g~~dg~I~vw~~~s~~~ 413 (415)
+++ ...++.|.+|++.+++.
T Consensus 261 ~v~--~~~~~~v~~~~~~~g~~ 280 (329)
T 3fvz_A 261 YFG--DQEPVQGFVMNFSSGEI 280 (329)
T ss_dssp CTT--CSCCCCEEEEETTTCCE
T ss_pred Eec--cCCCcEEEEEEcCCCeE
Confidence 222 23455899999887653
No 180
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.62 E-value=1.2e-13 Score=131.55 Aligned_cols=216 Identities=12% Similarity=0.170 Sum_probs=146.5
Q ss_pred ceeEeecCCCcEEEEEc----------CCeEEEEECCCCCeEEeEecCCCCCeEEEEEcCCCCeEEEEECC---C--cEE
Q 014934 169 YLNLVDWSSHNVLAVGL----------GNCVYLWNACSSKVTKLCDLGIDDSVCSVGWANRNTHLAVGTSH---G--KVQ 233 (415)
Q Consensus 169 ~i~~l~ws~~~~la~~~----------d~~V~iwd~~~~~~~~~~~~~~~~~V~~v~~sp~g~~la~g~~d---g--~V~ 233 (415)
.+..+.+ .+..|+... ++.|++|++.+++...+ ..+.++.|+|||++||.++.+ + .|.
T Consensus 16 ~~~~~~~-dG~~i~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l------~~~~~~~~SpDg~~la~~~~~~~~~~~~l~ 88 (347)
T 2gop_A 16 YLSDPRT-KGELVAYVLTKANLKDNKYENTIVIENLKNNARRFI------ENATMPRISPDGKKIAFMRANEEKKVSEIW 88 (347)
T ss_dssp EEEEEEE-ETTEEEEEEEEEETTTTEEEEEEEEEETTTCCEEEE------ESCEEEEECTTSSEEEEEEEETTTTEEEEE
T ss_pred EcccceE-CCcEEEEEEeecCcccCCccceEEEEeCCCCceEEc------ccCCCeEECCCCCEEEEEEeccCCCcceEE
Confidence 4556666 655555531 45799999999886554 468899999999999988754 3 377
Q ss_pred EEECCCCeeeEEecCCCccEEEEEee--CCEEEEEeC---------------------------CCcEEEEECCCCCccE
Q 014934 234 IWDASRCKRVRTMEGHRLRVGALAWS--SSLLSSGSR---------------------------DKSILQRDIRAQEDFV 284 (415)
Q Consensus 234 iwd~~~~~~~~~l~~h~~~V~~l~~~--~~~l~sgs~---------------------------dg~I~iwd~~~~~~~~ 284 (415)
+||+.+++.......+ . +..++|+ ++.|+.++. ...|++||+.++. .+
T Consensus 89 ~~~~~~g~~~~l~~~~-~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~-~~ 165 (347)
T 2gop_A 89 VADLETLSSKKILEAK-N-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEE-VI 165 (347)
T ss_dssp EEETTTTEEEEEEEES-E-EEEEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTTE-EE
T ss_pred EEECCCCceEEEEcCC-C-ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCe-EE
Confidence 8888887765544433 3 9999998 466776653 2569999998775 22
Q ss_pred EEeccccCCeEEEEEeCCCCEEEEEeCCC---------cEEEEECCCCceeEEeccCCCcEEEEEEcCCCCcEEEEEcCC
Q 014934 285 SKLSGHKSEVCGLKWSYDNRELASGGNDN---------RLFVWNQHSTQPVLKYCEHTAAVKAIAWSPHLHGLLASGGGT 355 (415)
Q Consensus 285 ~~~~~h~~~V~~l~~spdg~~lasg~~dg---------~I~iwd~~~~~~~~~~~~h~~~V~~l~~sp~~~~llasggg~ 355 (415)
..+.. . .+..+.|+||| +++++..++ .|+++| +++ ...+..+ ..+..+ +|+|+.+++.+...
T Consensus 166 ~~l~~-~-~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d--~~~-~~~l~~~-~~~~~~--spdg~~l~~~~~~~ 236 (347)
T 2gop_A 166 EEFEK-P-RFSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWE--DGK-EEKMFEK-VSFYAV--DSDGERILLYGKPE 236 (347)
T ss_dssp EEEEE-E-TTCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEE--TTE-EEEEEEE-ESEEEE--EECSSCEEEEECCS
T ss_pred eeecC-C-CcccccCCCCe-EEEEEecccccccccccccEEEeC--CCc-eEEeccC-cceeeE--CCCCCEEEEEEccc
Confidence 33433 3 78899999999 777776542 455556 444 3444444 555544 99999777665311
Q ss_pred -----CCCeEEEEECCCCcEEEEeeC-CCCEEE-EEECCCCCeEEEEEecCCCcEEEEECCC
Q 014934 356 -----ADRCIRFWNTTTNTHLSCMDT-GSQVCN-LVWSKNVNELVSTHGYSQNQIIVWRYPT 410 (415)
Q Consensus 356 -----~d~~I~iwd~~t~~~~~~~~~-~~~V~~-l~~s~~~~~l~s~~g~~dg~I~vw~~~s 410 (415)
....|.+|| +++....... ...+.. +.|+ ++ .+++ +..++.++|| +.+
T Consensus 237 ~~~~~~~~~l~~~d--~~~~~~l~~~~~~~~~~~~~~s-dg-~~~~--~~~~~~~~l~-~~~ 291 (347)
T 2gop_A 237 KKYMSEHNKLYIYD--GKEVMGILDEVDRGVGQAKIKD-GK-VYFT--LFEEGSVNLY-IWD 291 (347)
T ss_dssp SSCCCSSCEEEEEC--SSCEEESSTTCCSEEEEEEEET-TE-EEEE--EEETTEEEEE-EES
T ss_pred cCCccccceEEEEC--CCceEeccccCCcccCCccEEc-Cc-EEEE--EecCCcEEEE-EcC
Confidence 135788888 6655443332 456776 8999 88 6665 5678899999 864
No 181
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.61 E-value=1.5e-13 Score=130.39 Aligned_cols=230 Identities=8% Similarity=0.024 Sum_probs=161.1
Q ss_pred eeEeecCC-Cc-EEEEEcCCeEEEEECCCCCeEEeEecCCCCCeEEEEEcCCCCeEEEEECCCcEEEEECCCCeeeEEec
Q 014934 170 LNLVDWSS-HN-VLAVGLGNCVYLWNACSSKVTKLCDLGIDDSVCSVGWANRNTHLAVGTSHGKVQIWDASRCKRVRTME 247 (415)
Q Consensus 170 i~~l~ws~-~~-~la~~~d~~V~iwd~~~~~~~~~~~~~~~~~V~~v~~sp~g~~la~g~~dg~V~iwd~~~~~~~~~l~ 247 (415)
++++.|++ .. ++..+.++.+..|. ++....+. .+...+.+++|+++|++++++..++.|.+||..+++......
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~-~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~~~~~ 83 (333)
T 2dg1_A 8 LPTLFYSGKSNSAVPIISESELQTIT---AEPWLEIS-KKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRPFV 83 (333)
T ss_dssp CCBCCSCGGGGCSSCCCCGGGSCEEE---CEEEEEEE-SSCCCEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEE
T ss_pred cceeeecCCccceeEEeecccCcccc---cceeEEEe-ccCccccCcEECCCCCEEEEECCCCEEEEEeCCCCcEEEEee
Confidence 56677777 22 23334567788882 33333333 455678999999999988888889999999998877655444
Q ss_pred CCCccEEEEEee--CCEEEEEeCC----CcEEEEECCCCCccEEEec--cccCCeEEEEEeCCCCEEEEEeC------CC
Q 014934 248 GHRLRVGALAWS--SSLLSSGSRD----KSILQRDIRAQEDFVSKLS--GHKSEVCGLKWSYDNRELASGGN------DN 313 (415)
Q Consensus 248 ~h~~~V~~l~~~--~~~l~sgs~d----g~I~iwd~~~~~~~~~~~~--~h~~~V~~l~~spdg~~lasg~~------dg 313 (415)
.+...+.+++++ ++++++...+ +.|.+||..... ....+. .+...+.+++++|+|+++++... .+
T Consensus 84 ~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~-~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~ 162 (333)
T 2dg1_A 84 SHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDN-LQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLG 162 (333)
T ss_dssp CSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCS-CEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCE
T ss_pred CCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCE-EEEEEccCccCCcccceEECCCCCEEEEeccccccCCCc
Confidence 566789999998 4566666555 689999988765 222222 34457999999999998887654 35
Q ss_pred cEEEEECCCCceeEEeccCCCcEEEEEEcCCCCcEEEEEcCCCCCeEEEEECCC-CcEEEEe------e--CCCCEEEEE
Q 014934 314 RLFVWNQHSTQPVLKYCEHTAAVKAIAWSPHLHGLLASGGGTADRCIRFWNTTT-NTHLSCM------D--TGSQVCNLV 384 (415)
Q Consensus 314 ~I~iwd~~~~~~~~~~~~h~~~V~~l~~sp~~~~llasggg~~d~~I~iwd~~t-~~~~~~~------~--~~~~V~~l~ 384 (415)
.|..||..+++... +..+...+..++|+|+++.++++.. .++.|.+||+.+ +..+..+ . ....+..++
T Consensus 163 ~l~~~~~~~~~~~~-~~~~~~~~~~i~~~~dg~~l~v~~~--~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~i~ 239 (333)
T 2dg1_A 163 GVYYVSPDFRTVTP-IIQNISVANGIALSTDEKVLWVTET--TANRLHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCC 239 (333)
T ss_dssp EEEEECTTSCCEEE-EEEEESSEEEEEECTTSSEEEEEEG--GGTEEEEEEECTTSSSEEEEEEEEEEECCSSSEEEEEE
T ss_pred eEEEEeCCCCEEEE-eecCCCcccceEECCCCCEEEEEeC--CCCeEEEEEecCCCcCcccccceEEEecCCCCCCCceE
Confidence 67777776554433 3334456889999999987777665 578999999964 4332211 1 123678899
Q ss_pred ECCCCCeEEEEEecCCCcEEEEECC
Q 014934 385 WSKNVNELVSTHGYSQNQIIVWRYP 409 (415)
Q Consensus 385 ~s~~~~~l~s~~g~~dg~I~vw~~~ 409 (415)
++++|+.+++ ...++.|.+|+..
T Consensus 240 ~d~~G~l~v~--~~~~~~v~~~d~~ 262 (333)
T 2dg1_A 240 IDSDDNLYVA--MYGQGRVLVFNKR 262 (333)
T ss_dssp EBTTCCEEEE--EETTTEEEEECTT
T ss_pred ECCCCCEEEE--EcCCCEEEEECCC
Confidence 9999998777 3457899999874
No 182
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.61 E-value=2.7e-14 Score=150.94 Aligned_cols=220 Identities=10% Similarity=0.076 Sum_probs=151.1
Q ss_pred EeecCC-CcEEEEEcC----------CeEEEEECCCCCeEEeEecCCCCCeEEEEEcCCCCeEEEEECCCcEEEEECCCC
Q 014934 172 LVDWSS-HNVLAVGLG----------NCVYLWNACSSKVTKLCDLGIDDSVCSVGWANRNTHLAVGTSHGKVQIWDASRC 240 (415)
Q Consensus 172 ~l~ws~-~~~la~~~d----------~~V~iwd~~~~~~~~~~~~~~~~~V~~v~~sp~g~~la~g~~dg~V~iwd~~~~ 240 (415)
.+.||| ++.|+.+.+ +.+++||+.+++...+. .+...+..++|||||+.||.+. ++.|.+||+.++
T Consensus 66 ~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~~~~~~~~l~--~~~~~~~~~~~SPdG~~la~~~-~~~i~~~~~~~~ 142 (740)
T 4a5s_A 66 DYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQLITEE--RIPNNTQWVTWSPVGHKLAYVW-NNDIYVKIEPNL 142 (740)
T ss_dssp EEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSS--CCCTTEEEEEECSSTTCEEEEE-TTEEEEESSTTS
T ss_pred ceEECCCCCEEEEEECCeeeEEEccceEEEEEECCCCcEEEcc--cCCCcceeeEECCCCCEEEEEE-CCeEEEEECCCC
Confidence 478999 777777765 67889999999876543 5567899999999999999884 679999999887
Q ss_pred eeeEEe-cCCCccE-----------------EEEEee--CCEEEEEeCCC------------------------------
Q 014934 241 KRVRTM-EGHRLRV-----------------GALAWS--SSLLSSGSRDK------------------------------ 270 (415)
Q Consensus 241 ~~~~~l-~~h~~~V-----------------~~l~~~--~~~l~sgs~dg------------------------------ 270 (415)
+..+.. .++...+ ..+.|+ ++.|+.++.|.
T Consensus 143 ~~~~lt~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G 222 (740)
T 4a5s_A 143 PSYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAG 222 (740)
T ss_dssp CCEECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTT
T ss_pred ceEEEcCCCCccceecCcccccccchhcCCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCc
Confidence 654422 2333323 247888 46777765322
Q ss_pred ------cEEEEECCC---CCc-cEEEec------cccCCeEEEEEeCCCCEEEEEeC----CCcEEEEECCCCc----e-
Q 014934 271 ------SILQRDIRA---QED-FVSKLS------GHKSEVCGLKWSYDNRELASGGN----DNRLFVWNQHSTQ----P- 325 (415)
Q Consensus 271 ------~I~iwd~~~---~~~-~~~~~~------~h~~~V~~l~~spdg~~lasg~~----dg~I~iwd~~~~~----~- 325 (415)
.|++||+.+ +.. ....+. +|...+..++|+|||+.++.... +..|.+||+.+++ +
T Consensus 223 ~~~~~~~l~v~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~ 302 (740)
T 4a5s_A 223 AVNPTVKFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCL 302 (740)
T ss_dssp SCCCEEEEEEEETTSCCSSSCCCEEEECCCHHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTTTEEEEC
T ss_pred CcCCeeEEEEEECCCCCCCCcceEEEecCCccCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCcccccee
Confidence 488899987 621 123333 37778999999999997766532 3479999998887 1
Q ss_pred -eEEe--ccCCCcEE-----EEEEcCCCCcEE-EEEcCCCCCeEEEEECCCCcEEEEeeCCCCEEEEEECCCCCeEEEE
Q 014934 326 -VLKY--CEHTAAVK-----AIAWSPHLHGLL-ASGGGTADRCIRFWNTTTNTHLSCMDTGSQVCNLVWSKNVNELVST 395 (415)
Q Consensus 326 -~~~~--~~h~~~V~-----~l~~sp~~~~ll-asggg~~d~~I~iwd~~t~~~~~~~~~~~~V~~l~~s~~~~~l~s~ 395 (415)
+..+ +.|...|. .++|+|+|+.++ ..+.......|++||+.+++..........|..+.+ ++++.|+.+
T Consensus 303 ~~~~l~~~~~~~~v~~~~~~~p~fspDG~~l~~~~s~~~G~~~l~~~~~~~~~~~~lT~g~~~v~~~~~-~d~~~i~f~ 380 (740)
T 4a5s_A 303 VARQHIEMSTTGWVGRFRPSEPHFTLDGNSFYKIISNEEGYRHICYFQIDKKDCTFITKGTWEVIGIEA-LTSDYLYYI 380 (740)
T ss_dssp GGGCEEEECSSSCSSSSSCCCCEECTTSSEEEEEEECTTSCEEEEEEETTCSSCEESCCSSSCEEEEEE-ECSSEEEEE
T ss_pred EEEEeeeccCCceEccCcCCCceEcCCCCEEEEEEEcCCCceEEEEEECCCCceEecccCCEEEEEEEE-EeCCEEEEE
Confidence 1222 35665554 789999998766 443211235799999988876655445556766543 346666654
No 183
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.60 E-value=3.8e-14 Score=137.15 Aligned_cols=233 Identities=9% Similarity=-0.012 Sum_probs=153.5
Q ss_pred EeecCC-CcEEEEE-cCCeEEEEECCCCCeEEeEecCCCCCeEE-------------------EEEcCCCCeEEEE----
Q 014934 172 LVDWSS-HNVLAVG-LGNCVYLWNACSSKVTKLCDLGIDDSVCS-------------------VGWANRNTHLAVG---- 226 (415)
Q Consensus 172 ~l~ws~-~~~la~~-~d~~V~iwd~~~~~~~~~~~~~~~~~V~~-------------------v~~sp~g~~la~g---- 226 (415)
.+.|+| ++.|+.. .++.|++|++.+++...+... +...... +.|+|+++.++++
T Consensus 85 ~~~~spdg~~l~~~~~~~~l~~~d~~~~~~~~~~~~-~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~ 163 (396)
T 3c5m_A 85 GGFISTDERAFFYVKNELNLMKVDLETLEEQVIYTV-DEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYH 163 (396)
T ss_dssp TCEECTTSSEEEEEETTTEEEEEETTTCCEEEEEEC-CTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHH
T ss_pred cceECCCCCEEEEEEcCCcEEEEECCCCCcEEEEec-ccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeecc
Confidence 367999 6667655 567899999999988777653 3332222 3567888776654
Q ss_pred -ECCCcEEEEECCCCeeeEEecCCCccEEEEEeeC---CEEEEEeCC------CcEEEEECCCCCccEEEeccc--cCCe
Q 014934 227 -TSHGKVQIWDASRCKRVRTMEGHRLRVGALAWSS---SLLSSGSRD------KSILQRDIRAQEDFVSKLSGH--KSEV 294 (415)
Q Consensus 227 -~~dg~V~iwd~~~~~~~~~l~~h~~~V~~l~~~~---~~l~sgs~d------g~I~iwd~~~~~~~~~~~~~h--~~~V 294 (415)
..++.|.+||+.+++..... .+...+..+.|++ ..|+..+.+ ..|.+||+.... ...+..+ ...+
T Consensus 164 ~~~~~~l~~~d~~~g~~~~~~-~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~--~~~l~~~~~~~~~ 240 (396)
T 3c5m_A 164 TNPTCRLIKVDIETGELEVIH-QDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSN--VRKIKEHAEGESC 240 (396)
T ss_dssp TCCCEEEEEEETTTCCEEEEE-EESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCC--CEESSCCCTTEEE
T ss_pred CCCcceEEEEECCCCcEEeec-cCCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCc--eeEeeccCCCccc
Confidence 35668999999887765444 4667789999986 345555443 468899987654 2333333 2357
Q ss_pred EEEEEeCCCCEEEEEeCC-----CcEEEEECCCCceeEEeccCCCcEEEEEEcC-CCCcEEEEEcC-------------C
Q 014934 295 CGLKWSYDNRELASGGND-----NRLFVWNQHSTQPVLKYCEHTAAVKAIAWSP-HLHGLLASGGG-------------T 355 (415)
Q Consensus 295 ~~l~~spdg~~lasg~~d-----g~I~iwd~~~~~~~~~~~~h~~~V~~l~~sp-~~~~llasggg-------------~ 355 (415)
..++|+|||++|+.++.+ +.|++||+.+++..... ... ... ++|+| +++.++++++. .
T Consensus 241 ~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~-~~~-~~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~ 317 (396)
T 3c5m_A 241 THEFWIPDGSAMAYVSYFKGQTDRVIYKANPETLENEEVM-VMP-PCS-HLMSNFDGSLMVGDGCDAPVDVADADSYNIE 317 (396)
T ss_dssp EEEEECTTSSCEEEEEEETTTCCEEEEEECTTTCCEEEEE-ECC-SEE-EEEECSSSSEEEEEECCC----------CCC
T ss_pred cceEECCCCCEEEEEecCCCCccceEEEEECCCCCeEEee-eCC-CCC-CCccCCCCceEEEecCCcceeeccccccccC
Confidence 889999999988877544 44999999888654332 222 233 89999 99844443210 1
Q ss_pred CCCeEEEEECCCCcEEEEeeCCC-----------CEEEEEECCCCCeEEEEEecCCCc--EEEEECCCCc
Q 014934 356 ADRCIRFWNTTTNTHLSCMDTGS-----------QVCNLVWSKNVNELVSTHGYSQNQ--IIVWRYPTMS 412 (415)
Q Consensus 356 ~d~~I~iwd~~t~~~~~~~~~~~-----------~V~~l~~s~~~~~l~s~~g~~dg~--I~vw~~~s~~ 412 (415)
.+..|++||+.+++......+.. .+..+.|+|+|+.|+.++ ..++. |.++++.+.+
T Consensus 318 ~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~s-~~~~~~~l~~~~~~~~~ 386 (396)
T 3c5m_A 318 NDPFLYVLNTKAKSAQKLCKHSTSWDVLDGDRQITHPHPSFTPNDDGVLFTS-DFEGVPAIYIADVPESY 386 (396)
T ss_dssp CCCEEEEEETTTTBCCEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEE-CTTSSCEEEEEECCTTC
T ss_pred CCCcEEEEecccCceEEccCCCCccccccccccCCCCCceEccCCCeEEEEe-cCCCCceEEEEEEcccc
Confidence 24789999999887544333333 256789999999988763 34454 4445555543
No 184
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.58 E-value=7.1e-12 Score=121.60 Aligned_cols=238 Identities=7% Similarity=-0.054 Sum_probs=167.3
Q ss_pred EeecCC-CcEEEEEc-----------CCeEEEEECCCCCeEEeEecC-C-----CCCeEEEEEcCCCCeEEEEEC--CCc
Q 014934 172 LVDWSS-HNVLAVGL-----------GNCVYLWNACSSKVTKLCDLG-I-----DDSVCSVGWANRNTHLAVGTS--HGK 231 (415)
Q Consensus 172 ~l~ws~-~~~la~~~-----------d~~V~iwd~~~~~~~~~~~~~-~-----~~~V~~v~~sp~g~~la~g~~--dg~ 231 (415)
.+.++| ++.|.++. ++.|.+||..+.+....+.++ . ......+.|+|||++|+++.. ++.
T Consensus 70 ~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~ 149 (373)
T 2mad_H 70 NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPA 149 (373)
T ss_pred CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCccccccCCCccceEECCCCCEEEEEecCCCCe
Confidence 678888 67777763 467999999998887776543 1 134568999999999999874 478
Q ss_pred EEEEECCCCeeeEE-ecCCCccEEEEEeeCCEEEEEeCCCcEEEEECCCCCccEEEec-----cccCC-eEEEEEeCCCC
Q 014934 232 VQIWDASRCKRVRT-MEGHRLRVGALAWSSSLLSSGSRDKSILQRDIRAQEDFVSKLS-----GHKSE-VCGLKWSYDNR 304 (415)
Q Consensus 232 V~iwd~~~~~~~~~-l~~h~~~V~~l~~~~~~l~sgs~dg~I~iwd~~~~~~~~~~~~-----~h~~~-V~~l~~spdg~ 304 (415)
|.++| .+++.+.. +.. ...+....+.+..+++.+.||.+.++|. .+.. ..... ....+ .....+.+++.
T Consensus 150 v~viD-~t~~~~~~~i~~-~~~~~~~~~~~~~~~~~~~dg~~~~vd~-~g~~-~~~~~~~~~~~~~~p~~~~~~~~~~~~ 225 (373)
T 2mad_H 150 VGLVV-QGGSSDDQLLSS-PTCYHIHPGAPSTFYLLCAQGGLAKTDH-AGGA-AGAGLVGAMLTAAQNLLTQPAQANKSG 225 (373)
T ss_pred EEEEE-CCCCEEeEEcCC-CceEEEEeCCCceEEEEcCCCCEEEEEC-CCcE-EEEEeccccccCCcceeecceeEecCC
Confidence 99999 99988877 653 2223333334567778889999999999 6653 22111 11112 12345667666
Q ss_pred EEEEEeCCCcEEEEECCCCc--eeEEecc----------CCCcEEEEEEcCCCCcEEEEEcCC-------CCCeEEEEEC
Q 014934 305 ELASGGNDNRLFVWNQHSTQ--PVLKYCE----------HTAAVKAIAWSPHLHGLLASGGGT-------ADRCIRFWNT 365 (415)
Q Consensus 305 ~lasg~~dg~I~iwd~~~~~--~~~~~~~----------h~~~V~~l~~sp~~~~llasggg~-------~d~~I~iwd~ 365 (415)
.++..+..+.+.+.|+.+.. .+..+.- .......++++|+++.++++.... ..+.|.++|+
T Consensus 226 ~~~~~~~~~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~ 305 (373)
T 2mad_H 226 RIVWPVYSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTG 305 (373)
T ss_pred EEEEEcCCceEEEEeccCCcceEeeeeeecCCcccccceecCceEeEEECCCCCEEEEEeccCCcccccCCCCeEEEEEC
Confidence 65555578899999997653 2222211 112244578999998888865310 1368999999
Q ss_pred CCCcEEEEeeCCCCEEEEEECCCCC-eEEEEEecCCCcEEEEECCCCccc
Q 014934 366 TTNTHLSCMDTGSQVCNLVWSKNVN-ELVSTHGYSQNQIIVWRYPTMSKV 414 (415)
Q Consensus 366 ~t~~~~~~~~~~~~V~~l~~s~~~~-~l~s~~g~~dg~I~vw~~~s~~~l 414 (415)
.+++.+..+..+....++.|++||+ .++++ ...++.|.+||..+++.+
T Consensus 306 ~t~~vv~~i~~g~~p~~i~~s~Dg~~~l~v~-~~~~~~V~ViD~~t~~vv 354 (373)
T 2mad_H 306 LVGQTSSQISLGHDVDAISVAQDGGPDLYAL-SAGTEVLHIYDAGAGDQD 354 (373)
T ss_pred CCCEEEEEEECCCCcCeEEECCCCCeEEEEE-cCCCCeEEEEECCCCCEE
Confidence 9999999998888899999999999 56663 335889999999988753
No 185
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.58 E-value=2.5e-12 Score=120.46 Aligned_cols=233 Identities=9% Similarity=0.053 Sum_probs=160.8
Q ss_pred ceeEeecCC-CcEEEE--------EcCCeEEEEECCCCCeEEeEe---cCCCCCeEEEEEcCC-CCeEEEEECCCcEEEE
Q 014934 169 YLNLVDWSS-HNVLAV--------GLGNCVYLWNACSSKVTKLCD---LGIDDSVCSVGWANR-NTHLAVGTSHGKVQIW 235 (415)
Q Consensus 169 ~i~~l~ws~-~~~la~--------~~d~~V~iwd~~~~~~~~~~~---~~~~~~V~~v~~sp~-g~~la~g~~dg~V~iw 235 (415)
....++|++ ++++++ ..++.|++|+..+++...... .++...+.+++++++ |++++ ++..+.|.+|
T Consensus 19 ~~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v-~~~~~~l~~~ 97 (314)
T 1pjx_A 19 GAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFV-ADMRLGLLVV 97 (314)
T ss_dssp TCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEE-EETTTEEEEE
T ss_pred CccCceECCCCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEE-EECCCCEEEE
Confidence 356888988 666666 457899999988888754432 013467999999999 66444 4545579999
Q ss_pred ECCCCeeeEE-ecC----CCccEEEEEee--CCEEEEEeCC---------------CcEEEEECCCCCccEEEeccccCC
Q 014934 236 DASRCKRVRT-MEG----HRLRVGALAWS--SSLLSSGSRD---------------KSILQRDIRAQEDFVSKLSGHKSE 293 (415)
Q Consensus 236 d~~~~~~~~~-l~~----h~~~V~~l~~~--~~~l~sgs~d---------------g~I~iwd~~~~~~~~~~~~~h~~~ 293 (415)
|.. ++.... ... ....+.+++++ ++++++...+ +.|..+|.. +. ...+..+...
T Consensus 98 d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~--~~~~~~~~~~ 173 (314)
T 1pjx_A 98 QTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQ--MIQVDTAFQF 173 (314)
T ss_dssp ETT-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SC--EEEEEEEESS
T ss_pred eCC-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CC--EEEeccCCCC
Confidence 988 654332 221 12357888887 4555555444 567777765 33 2333334456
Q ss_pred eEEEEEe----CCCCEEEEE-eCCCcEEEEECC-CCc-----eeEEeccCC-CcEEEEEEcCCCCcEEEEEcCCCCCeEE
Q 014934 294 VCGLKWS----YDNRELASG-GNDNRLFVWNQH-STQ-----PVLKYCEHT-AAVKAIAWSPHLHGLLASGGGTADRCIR 361 (415)
Q Consensus 294 V~~l~~s----pdg~~lasg-~~dg~I~iwd~~-~~~-----~~~~~~~h~-~~V~~l~~sp~~~~llasggg~~d~~I~ 361 (415)
..+++|+ |+++.|..+ ..++.|.+||.. +++ ....+..+. ..+..++++++|. ++++.. .++.|.
T Consensus 174 ~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~-l~v~~~--~~~~i~ 250 (314)
T 1pjx_A 174 PNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNN-LLVANW--GSSHIE 250 (314)
T ss_dssp EEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCC-EEEEEE--TTTEEE
T ss_pred cceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCC-EEEEEc--CCCEEE
Confidence 7899999 999765554 567899999986 443 223333444 6688999999986 666554 478999
Q ss_pred EEECCCCcEEEEeeCC-CCEEEEEECCCCCeEEEEEecCCCcEEEEECCC
Q 014934 362 FWNTTTNTHLSCMDTG-SQVCNLVWSKNVNELVSTHGYSQNQIIVWRYPT 410 (415)
Q Consensus 362 iwd~~t~~~~~~~~~~-~~V~~l~~s~~~~~l~s~~g~~dg~I~vw~~~s 410 (415)
+||..+++.+..+... ..+.+++|+++++.|.++ ...++.|..|+...
T Consensus 251 ~~d~~~g~~~~~~~~~~~~~~~i~~~~dg~~l~v~-~~~~~~l~~~~~~~ 299 (314)
T 1pjx_A 251 VFGPDGGQPKMRIRCPFEKPSNLHFKPQTKTIFVT-EHENNAVWKFEWQR 299 (314)
T ss_dssp EECTTCBSCSEEEECSSSCEEEEEECTTSSEEEEE-ETTTTEEEEEECSS
T ss_pred EEcCCCCcEeEEEeCCCCCceeEEECCCCCEEEEE-eCCCCeEEEEeCCC
Confidence 9999888777666543 679999999999966654 44567999999764
No 186
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.58 E-value=1.9e-12 Score=120.03 Aligned_cols=193 Identities=14% Similarity=0.167 Sum_probs=145.7
Q ss_pred CCCCeEEEEEcCCCCeEEEEECCCcEEEEECCCCeeeEEec------CCCccEEEEEee--CCEEEEEeC--CCcEEEEE
Q 014934 207 IDDSVCSVGWANRNTHLAVGTSHGKVQIWDASRCKRVRTME------GHRLRVGALAWS--SSLLSSGSR--DKSILQRD 276 (415)
Q Consensus 207 ~~~~V~~v~~sp~g~~la~g~~dg~V~iwd~~~~~~~~~l~------~h~~~V~~l~~~--~~~l~sgs~--dg~I~iwd 276 (415)
+-..+.+++++++|+++++...++.|.+||.. ++.+..+. ++...+.++++. ...|+++.. ++.|.+||
T Consensus 28 ~~~~p~~v~~~~~g~l~v~~~~~~~i~~~d~~-g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~~d 106 (286)
T 1q7f_A 28 QFTEPSGVAVNAQNDIIVADTNNHRIQIFDKE-GRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIYN 106 (286)
T ss_dssp CBSCEEEEEECTTCCEEEEEGGGTEEEEECTT-SCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEEEC
T ss_pred ccCCCceEEECCCCCEEEEECCCCEEEEECCC-CcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCCEEEEEC
Confidence 34578999999999988887889999999987 56666553 244678899994 345555553 88999999
Q ss_pred CCCCCccEEEec-cccCCeEEEEEeCCCCEEEEEeCCCcEEEEECCCCceeEEec--cCCCcEEEEEEcCCCCcEEEEEc
Q 014934 277 IRAQEDFVSKLS-GHKSEVCGLKWSYDNRELASGGNDNRLFVWNQHSTQPVLKYC--EHTAAVKAIAWSPHLHGLLASGG 353 (415)
Q Consensus 277 ~~~~~~~~~~~~-~h~~~V~~l~~spdg~~lasg~~dg~I~iwd~~~~~~~~~~~--~h~~~V~~l~~sp~~~~llasgg 353 (415)
. .+. .+..+. .+...+.+++++|+|+++++...++.|.+||.. ++.+..+. .+...+.+++++|++. ++++..
T Consensus 107 ~-~g~-~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~p~~i~~~~~g~-l~v~~~ 182 (286)
T 1q7f_A 107 Q-YGQ-FVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQN-GNVLHKFGCSKHLEFPNGVVVNDKQE-IFISDN 182 (286)
T ss_dssp T-TSC-EEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEEECTTTCSSEEEEEECSSSE-EEEEEG
T ss_pred C-CCc-EEEEecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcCC-CCEEEEeCCCCccCCcEEEEECCCCC-EEEEEC
Confidence 4 444 344443 344678999999999988888888999999964 55565553 3456789999999987 777765
Q ss_pred CCCCCeEEEEECCCCcEEEEeeCC---CCEEEEEECCCCCeEEEEEecCCC-cEEEEECC
Q 014934 354 GTADRCIRFWNTTTNTHLSCMDTG---SQVCNLVWSKNVNELVSTHGYSQN-QIIVWRYP 409 (415)
Q Consensus 354 g~~d~~I~iwd~~t~~~~~~~~~~---~~V~~l~~s~~~~~l~s~~g~~dg-~I~vw~~~ 409 (415)
.++.|++||. +++.+..+... ..+..++++++|+.+++ ...++ .|.+|+..
T Consensus 183 --~~~~i~~~~~-~g~~~~~~~~~g~~~~p~~i~~d~~G~l~v~--~~~~~~~i~~~~~~ 237 (286)
T 1q7f_A 183 --RAHCVKVFNY-EGQYLRQIGGEGITNYPIGVGINSNGEILIA--DNHNNFNLTIFTQD 237 (286)
T ss_dssp --GGTEEEEEET-TCCEEEEESCTTTSCSEEEEEECTTCCEEEE--ECSSSCEEEEECTT
T ss_pred --CCCEEEEEcC-CCCEEEEEccCCccCCCcEEEECCCCCEEEE--eCCCCEEEEEECCC
Confidence 5899999997 56666666533 56899999999988777 44565 99999953
No 187
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.58 E-value=1.8e-11 Score=113.44 Aligned_cols=230 Identities=10% Similarity=-0.075 Sum_probs=165.6
Q ss_pred cceeEeecCC-CcEEEEEc-CCeEEEEECCCCCeEEeEecCCCCCeEEEEEcCCCCeEEEEECCCcEEEEECCCCeee-E
Q 014934 168 FYLNLVDWSS-HNVLAVGL-GNCVYLWNACSSKVTKLCDLGIDDSVCSVGWANRNTHLAVGTSHGKVQIWDASRCKRV-R 244 (415)
Q Consensus 168 ~~i~~l~ws~-~~~la~~~-d~~V~iwd~~~~~~~~~~~~~~~~~V~~v~~sp~g~~la~g~~dg~V~iwd~~~~~~~-~ 244 (415)
..+.++.+++ ++++++.. ++.|.+|+.. ++............+.++++.++|.++++...++.|..||.. ++.. .
T Consensus 15 ~~~~~i~~d~~g~l~v~~~~~~~v~~~d~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~ 92 (299)
T 2z2n_A 15 TGPYGITVSDKGKVWITQHKANMISCINLD-GKITEYPLPTPDAKVMCLTISSDGEVWFTENAANKIGRITKK-GIIKEY 92 (299)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECTT-CCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEE
T ss_pred CCccceEECCCCCEEEEecCCCcEEEEcCC-CCeEEecCCcccCceeeEEECCCCCEEEeCCCCCeEEEECCC-CcEEEE
Confidence 3578888888 66666665 6899999988 665544322345789999999999977776668889999986 3322 2
Q ss_pred EecCCCccEEEEEee--CCEEEEEeCCCcEEEEECCCCCccEEEeccccCCeEEEEEeCCCCEEEEEeCCCcEEEEECCC
Q 014934 245 TMEGHRLRVGALAWS--SSLLSSGSRDKSILQRDIRAQEDFVSKLSGHKSEVCGLKWSYDNRELASGGNDNRLFVWNQHS 322 (415)
Q Consensus 245 ~l~~h~~~V~~l~~~--~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~spdg~~lasg~~dg~I~iwd~~~ 322 (415)
.+......+.++++. +.++++...++.|..||. .+.........+...+.+++++++|+++++...++.|.+||. +
T Consensus 93 ~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~ 170 (299)
T 2z2n_A 93 TLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGKIREYELPNKGSYPSFITLGSDNALWFTENQNNAIGRITE-S 170 (299)
T ss_dssp ECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-T
T ss_pred eCCCcCCCceeeEECCCCCEEEEecCCceEEEECC-CCCEEEecCCCCCCCCceEEEcCCCCEEEEeCCCCEEEEEcC-C
Confidence 222345578889987 456666666889999998 443222222334567899999999988888777889999999 6
Q ss_pred CceeEE-eccCCCcEEEEEEcCCCCcEEEEEcCCCCCeEEEEECCCCcEEEEee---CCCCEEEEEECCCCCeEEEEEec
Q 014934 323 TQPVLK-YCEHTAAVKAIAWSPHLHGLLASGGGTADRCIRFWNTTTNTHLSCMD---TGSQVCNLVWSKNVNELVSTHGY 398 (415)
Q Consensus 323 ~~~~~~-~~~h~~~V~~l~~sp~~~~llasggg~~d~~I~iwd~~t~~~~~~~~---~~~~V~~l~~s~~~~~l~s~~g~ 398 (415)
++.... +..+...+.++++.+++. ++++.. .++.|.+||. +++... +. ....+.+++++++|+.+++ ..
T Consensus 171 g~~~~~~~~~~~~~~~~i~~~~~g~-l~v~~~--~~~~i~~~~~-~g~~~~-~~~~~~~~~~~~i~~~~~g~l~v~--~~ 243 (299)
T 2z2n_A 171 GDITEFKIPTPASGPVGITKGNDDA-LWFVEI--IGNKIGRITT-SGEITE-FKIPTPNARPHAITAGAGIDLWFT--EW 243 (299)
T ss_dssp CCEEEEECSSTTCCEEEEEECTTSS-EEEEET--TTTEEEEECT-TCCEEE-EECSSTTCCEEEEEECSTTCEEEE--ET
T ss_pred CcEEEeeCCCCCCcceeEEECCCCC-EEEEcc--CCceEEEECC-CCcEEE-EECCCCCCCceeEEECCCCCEEEe--cc
Confidence 655432 333456788999999987 666654 5789999999 776443 32 3367899999999986666 44
Q ss_pred CCCcEEEEEC
Q 014934 399 SQNQIIVWRY 408 (415)
Q Consensus 399 ~dg~I~vw~~ 408 (415)
.++.|.+|+.
T Consensus 244 ~~~~i~~~d~ 253 (299)
T 2z2n_A 244 GANKIGRLTS 253 (299)
T ss_dssp TTTEEEEEET
T ss_pred CCceEEEECC
Confidence 6788999986
No 188
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.58 E-value=3.8e-14 Score=137.43 Aligned_cols=173 Identities=14% Similarity=0.082 Sum_probs=136.2
Q ss_pred ceeEeecCC-CcEEEEEcCCeEEEEECCCCC---------eEEeEecCCCCCeEEEEEcCCCCeEEEEECCCcEEEEECC
Q 014934 169 YLNLVDWSS-HNVLAVGLGNCVYLWNACSSK---------VTKLCDLGIDDSVCSVGWANRNTHLAVGTSHGKVQIWDAS 238 (415)
Q Consensus 169 ~i~~l~ws~-~~~la~~~d~~V~iwd~~~~~---------~~~~~~~~~~~~V~~v~~sp~g~~la~g~~dg~V~iwd~~ 238 (415)
.++++++++ ..++++|....+.+|++.+.+ ........+.. |+.|+| ++++|+++ .+|.|++||+.
T Consensus 39 ~~nlLais~~~gll~a~~~~~l~v~~~~~l~~~~~~~~~~~~~~~~~~lp~-V~~l~f--d~~~L~v~-~~~~l~v~dv~ 114 (388)
T 1xip_A 39 SLQNLDISNSKSLFVAASGSKAVVGELQLLRDHITSDSTPLTFKWEKEIPD-VIFVCF--HGDQVLVS-TRNALYSLDLE 114 (388)
T ss_dssp CCBCEEEETTTTEEEEEETTEEEEEEHHHHHHHHHSSSCCCCCSEEEECTT-EEEEEE--ETTEEEEE-ESSEEEEEESS
T ss_pred cccEEEEcCCCCEEEEeCCCEEEEEEhhHhhhhhccccccccceEEeeCCC-eeEEEE--CCCEEEEE-cCCcEEEEEch
Confidence 488999999 788888888899999865432 11111223456 999999 99999999 88999999998
Q ss_pred CCeeeEEecCCCccEEEEEeeCCEEEEEeCCCcEEEEECCCCCccEEEeccccCCeEEEEEeCCCCEEEEEeCCCcEEEE
Q 014934 239 RCKRVRTMEGHRLRVGALAWSSSLLSSGSRDKSILQRDIRAQEDFVSKLSGHKSEVCGLKWSYDNRELASGGNDNRLFVW 318 (415)
Q Consensus 239 ~~~~~~~l~~h~~~V~~l~~~~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~spdg~~lasg~~dg~I~iw 318 (415)
+.........|...+.++.+.+..+++++.||.|.+||+..... .. +...|++++|||+| ++.|..||.+++|
T Consensus 115 sl~~~~~~~~~~~~v~~i~~~~p~~av~~~dG~L~v~dl~~~~~-~~----~~~~Vs~v~WSpkG--~~vg~~dg~i~~~ 187 (388)
T 1xip_A 115 ELSEFRTVTSFEKPVFQLKNVNNTLVILNSVNDLSALDLRTKST-KQ----LAQNVTSFDVTNSQ--LAVLLKDRSFQSF 187 (388)
T ss_dssp STTCEEEEEECSSCEEEEEECSSEEEEEETTSEEEEEETTTCCE-EE----EEESEEEEEECSSE--EEEEETTSCEEEE
T ss_pred hhhccCccceeecceeeEEecCCCEEEEECCCCEEEEEccCCcc-cc----ccCCceEEEEcCCc--eEEEEcCCcEEEE
Confidence 76666666677788999888765699999999999999987762 22 45689999999999 7889999999999
Q ss_pred ECCCCce--eEEe------c---cCCCcEEEEEEcCCCCcEEEEE
Q 014934 319 NQHSTQP--VLKY------C---EHTAAVKAIAWSPHLHGLLASG 352 (415)
Q Consensus 319 d~~~~~~--~~~~------~---~h~~~V~~l~~sp~~~~llasg 352 (415)
+...+.. ..++ . +|...|.+|.|.+++.++++-+
T Consensus 188 ~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~y~ 232 (388)
T 1xip_A 188 AWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAVFG 232 (388)
T ss_dssp EEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEEEE
T ss_pred cCCCccccccceecCCcccccccCCCeeEEEEEEecCCeEEEEEc
Confidence 9877764 4555 3 3788999999999887555433
No 189
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.55 E-value=3.4e-13 Score=141.57 Aligned_cols=250 Identities=10% Similarity=0.002 Sum_probs=167.2
Q ss_pred CceeccCCCCC--CCcceeEeecCC-CcEEEEEc--C----CeEEEEECCCCCeEEeEecCCCCCeEEEEEcCCCCeEEE
Q 014934 155 PYKILDAPALQ--DDFYLNLVDWSS-HNVLAVGL--G----NCVYLWNACSSKVTKLCDLGIDDSVCSVGWANRNTHLAV 225 (415)
Q Consensus 155 p~~~ld~~~l~--~~~~i~~l~ws~-~~~la~~~--d----~~V~iwd~~~~~~~~~~~~~~~~~V~~v~~sp~g~~la~ 225 (415)
+..++|...+. ..+.+..++||| ++.||.+. + ..|++||+.+++......+.. ....+++|+|||+.|+.
T Consensus 106 ~~~l~d~~~~a~~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~~~~~~~-~~~~~~~wspDg~~l~~ 184 (695)
T 2bkl_A 106 EKVLLDPNGWSKDGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSKVDVIEG-GKYATPKWTPDSKGFYY 184 (695)
T ss_dssp CEEEECGGGSSSSSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCSSCCBSC-CTTCCCEECTTSSEEEE
T ss_pred cEEEEchHHhccCCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcCCcccCc-ccccceEEecCCCEEEE
Confidence 44555544332 235688999999 78888653 2 479999999998641111111 11268999999999999
Q ss_pred EECCCc-------------EEEEECCCCe----eeEEecCCCccEEEEEee--CCEEEEEeCCC----cEEEEECCCCCc
Q 014934 226 GTSHGK-------------VQIWDASRCK----RVRTMEGHRLRVGALAWS--SSLLSSGSRDK----SILQRDIRAQED 282 (415)
Q Consensus 226 g~~dg~-------------V~iwd~~~~~----~~~~l~~h~~~V~~l~~~--~~~l~sgs~dg----~I~iwd~~~~~~ 282 (415)
++.+.. |.+|++.++. .+.....|...+..+.|+ +++|+.++.++ .|++||...+.
T Consensus 185 ~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~- 263 (695)
T 2bkl_A 185 EWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKD- 263 (695)
T ss_dssp EECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSS-
T ss_pred EEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCc-
Confidence 988776 9999998765 333333456678899998 46677666555 67777665443
Q ss_pred cEEEeccccCCeEEEEEeCCCCEEEEEe---CCCcEEEEECCCCce--eEEeccC--CCcEEEEEEcCCCCcEEEEEcCC
Q 014934 283 FVSKLSGHKSEVCGLKWSYDNRELASGG---NDNRLFVWNQHSTQP--VLKYCEH--TAAVKAIAWSPHLHGLLASGGGT 355 (415)
Q Consensus 283 ~~~~~~~h~~~V~~l~~spdg~~lasg~---~dg~I~iwd~~~~~~--~~~~~~h--~~~V~~l~~sp~~~~llasggg~ 355 (415)
...+..+...+....| ++|.+++... .++.|.+||+.++.. ...+..| ...+..++|+ + ..++++..
T Consensus 264 -~~~l~~~~~~~~~~~~-~~g~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~-~-~~lv~~~~-- 337 (695)
T 2bkl_A 264 -FRLLVKGVGAKYEVHA-WKDRFYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSSASLLSVSIV-G-GHLSLEYL-- 337 (695)
T ss_dssp -CEEEEECSSCCEEEEE-ETTEEEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSSCEEEEEEEE-T-TEEEEEEE--
T ss_pred -eEEeecCCCceEEEEe-cCCcEEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCCCCeEEEEEEE-C-CEEEEEEE--
Confidence 3445555556666667 5666444443 257899999987753 2333333 4567888888 3 45777776
Q ss_pred CCCeEEEEECC-CCcEEEEeeC--CCCEEEEEECCCCCeEEEEEe--cCCCcEEEEECCCCc
Q 014934 356 ADRCIRFWNTT-TNTHLSCMDT--GSQVCNLVWSKNVNELVSTHG--YSQNQIIVWRYPTMS 412 (415)
Q Consensus 356 ~d~~I~iwd~~-t~~~~~~~~~--~~~V~~l~~s~~~~~l~s~~g--~~dg~I~vw~~~s~~ 412 (415)
.|+..++|.+. +++.+..+.. ...|..+.+++++..++.+.. ...+.|++||+.+++
T Consensus 338 ~dg~~~l~~~~~~g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~v~~~d~~~g~ 399 (695)
T 2bkl_A 338 KDATSEVRVATLKGKPVRTVQLPGVGAASNLMGLEDLDDAYYVFTSFTTPRQIYKTSVSTGK 399 (695)
T ss_dssp ETTEEEEEEEETTCCEEEECCCSSSSEECCCBSCTTCSEEEEEEEETTEEEEEEEEETTTCC
T ss_pred ECCEEEEEEEeCCCCeeEEecCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCc
Confidence 78887777654 4666666543 455778899999988875422 234689999998764
No 190
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.54 E-value=8.9e-13 Score=139.40 Aligned_cols=250 Identities=10% Similarity=-0.022 Sum_probs=167.0
Q ss_pred CceeccCCCCCCC--cceeEeecCC-CcEEEEEcC------CeEEEEECCCCCeEEeEecCCCCCeEEEEEcCCCCeEEE
Q 014934 155 PYKILDAPALQDD--FYLNLVDWSS-HNVLAVGLG------NCVYLWNACSSKVTKLCDLGIDDSVCSVGWANRNTHLAV 225 (415)
Q Consensus 155 p~~~ld~~~l~~~--~~i~~l~ws~-~~~la~~~d------~~V~iwd~~~~~~~~~~~~~~~~~V~~v~~sp~g~~la~ 225 (415)
+..++|...+..+ +.+..+.||| ++.||.+.+ ..|++||+.+++...... +...+..++|+|| +.|+.
T Consensus 148 ~~~lld~~~l~~~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~~~--~~~~~~~~~wspD-~~l~~ 224 (741)
T 1yr2_A 148 GRVLLDPNTWAKDGATALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKPLADEL--KWVKFSGLAWLGN-DALLY 224 (741)
T ss_dssp CEEEECGGGCC----EEEEEEEECTTSSEEEEEEEETTCSEEEEEEEETTTCCEEEEEE--EEEESCCCEESTT-SEEEE
T ss_pred CEEEECHHHhccCCCEEEEeEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCCccC--CCceeccEEEECC-CEEEE
Confidence 3445554443332 4788999999 788887743 269999999998765421 1122357899999 99999
Q ss_pred EECCCc--------------EEEEECCCCee--eEEec--CCCccEEEEEee--CCEEEEEeCCC-----cEEEEECCCC
Q 014934 226 GTSHGK--------------VQIWDASRCKR--VRTME--GHRLRVGALAWS--SSLLSSGSRDK-----SILQRDIRAQ 280 (415)
Q Consensus 226 g~~dg~--------------V~iwd~~~~~~--~~~l~--~h~~~V~~l~~~--~~~l~sgs~dg-----~I~iwd~~~~ 280 (415)
+..++. |.+|++.++.. ...+. .+...+..+.|+ +++|+..+.++ .|++||+.++
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~ 304 (741)
T 1yr2_A 225 SRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNG 304 (741)
T ss_dssp EECCCC--------CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETT
T ss_pred EEecCcccccccccCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCC
Confidence 887654 88999977642 22333 344458889998 46677666443 7999999876
Q ss_pred Ccc-EEEeccccCCeEEEEEeCCCCEEEEEeCC----CcEEEEECCCC--ceeEEeccCCCcEEEEEEcCCCCcEEEEEc
Q 014934 281 EDF-VSKLSGHKSEVCGLKWSYDNRELASGGND----NRLFVWNQHST--QPVLKYCEHTAAVKAIAWSPHLHGLLASGG 353 (415)
Q Consensus 281 ~~~-~~~~~~h~~~V~~l~~spdg~~lasg~~d----g~I~iwd~~~~--~~~~~~~~h~~~V~~l~~sp~~~~llasgg 353 (415)
... ...+..+...+... ++|+|+.|+..+++ +.|.+||+.++ .....+..+...+..++|. +..++++..
T Consensus 305 ~~~~~~~l~~~~~~~~~~-~~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~l~~~~~~--~~~lv~~~~ 381 (741)
T 1yr2_A 305 KIGPVTALIPDLKAQWDF-VDGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPESKDNLESVGIA--GNRLFASYI 381 (741)
T ss_dssp EECCCEEEECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEECCCSSEEEEEEEE--BTEEEEEEE
T ss_pred CCcccEEecCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEecCCCCeEEEEEEE--CCEEEEEEE
Confidence 322 34455555555555 35899998887764 45999999874 3333344455556677887 445777776
Q ss_pred CCCCCeEEEEECC-CCcEEEEee--CCCCEEEEEECCCCCeEEEEEe--cCCCcEEEEECCCCc
Q 014934 354 GTADRCIRFWNTT-TNTHLSCMD--TGSQVCNLVWSKNVNELVSTHG--YSQNQIIVWRYPTMS 412 (415)
Q Consensus 354 g~~d~~I~iwd~~-t~~~~~~~~--~~~~V~~l~~s~~~~~l~s~~g--~~dg~I~vw~~~s~~ 412 (415)
.|+..++|.+. +++.+..+. ....|..+.++++++.|+.+.. ...+.|++||+.+++
T Consensus 382 --~dg~~~l~~~~~~g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~ 443 (741)
T 1yr2_A 382 --HDAKSQVLAFDLDGKPAGAVSLPGIGSASGLSGRPGDRHAYLSFSSFTQPATVLALDPATAK 443 (741)
T ss_dssp --ETTEEEEEEEETTSCEEEECBCSSSCEEEEEECCBTCSCEEEEEEETTEEEEEEEEETTTTE
T ss_pred --ECCEEEEEEEeCCCCceeeccCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCc
Confidence 67777666543 466666665 3456888999999987775322 234789999987754
No 191
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.53 E-value=1.9e-12 Score=136.12 Aligned_cols=221 Identities=8% Similarity=0.041 Sum_probs=150.3
Q ss_pred eEEEEECCCCCeEEeEec-----CCCCCeEEEEEcCCCCeEEEEECCC-----cEEEEECCCCeeeEEecCCCccEEEEE
Q 014934 188 CVYLWNACSSKVTKLCDL-----GIDDSVCSVGWANRNTHLAVGTSHG-----KVQIWDASRCKRVRTMEGHRLRVGALA 257 (415)
Q Consensus 188 ~V~iwd~~~~~~~~~~~~-----~~~~~V~~v~~sp~g~~la~g~~dg-----~V~iwd~~~~~~~~~l~~h~~~V~~l~ 257 (415)
.+++.+..+++...++.. ++...+.+++|||||++||.+..++ .|++||+.+++.+.....+ ..+..++
T Consensus 99 ~l~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~~-~~~~~~~ 177 (710)
T 2xdw_A 99 VLYVQDSLEGEARVFLDPNILSDDGTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLER-VKFSCMA 177 (710)
T ss_dssp EEEEESSTTSCCEEEECGGGGCTTSCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEEE-ECSCCEE
T ss_pred EEEEEcCCCCCcEEEECHHHhccCCCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCcccccC-cccceEE
Confidence 455555555554444322 2333588999999999999887644 8999999999876543222 2256789
Q ss_pred ee--CCEEEEEeCCCc----------------EEEEECCCCCcc-EEEec--cccCCeEEEEEeCCCCEEEEEeC-----
Q 014934 258 WS--SSLLSSGSRDKS----------------ILQRDIRAQEDF-VSKLS--GHKSEVCGLKWSYDNRELASGGN----- 311 (415)
Q Consensus 258 ~~--~~~l~sgs~dg~----------------I~iwd~~~~~~~-~~~~~--~h~~~V~~l~~spdg~~lasg~~----- 311 (415)
|+ ++.|+.++.++. |++|++.++... ...+. .|...+.++.|+|||++|+.++.
T Consensus 178 wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~ 257 (710)
T 2xdw_A 178 WTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDP 257 (710)
T ss_dssp ECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSS
T ss_pred EEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCC
Confidence 98 468888887766 999999876522 22222 34556889999999999988764
Q ss_pred CCcEEEEECCC------Cc-eeEEeccCCCcEEEEEEcCCCCcEEEEEcC-CCCCeEEEEECCCCcE---EEEeeCCC--
Q 014934 312 DNRLFVWNQHS------TQ-PVLKYCEHTAAVKAIAWSPHLHGLLASGGG-TADRCIRFWNTTTNTH---LSCMDTGS-- 378 (415)
Q Consensus 312 dg~I~iwd~~~------~~-~~~~~~~h~~~V~~l~~sp~~~~llasggg-~~d~~I~iwd~~t~~~---~~~~~~~~-- 378 (415)
+..|++||+.+ +. ....+..+...+.. .|+|+|..+++.+.. .....|.+||+.++.. ...+.+..
T Consensus 258 ~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~ 336 (710)
T 2xdw_A 258 VNRLWYCDLQQESNGITGILKWVKLIDNFEGEYD-YVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKD 336 (710)
T ss_dssp CCEEEEEEGGGSSSSSCSSCCCEEEECSSSSCEE-EEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSC
T ss_pred ccEEEEEECcccccccCCccceEEeeCCCCcEEE-EEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCCCCC
Confidence 67899999986 43 45666677766655 488998877776641 1245799999988742 22233333
Q ss_pred CEEEEEECCCCCeEEEEEecCCC--cEEEEECCCCc
Q 014934 379 QVCNLVWSKNVNELVSTHGYSQN--QIIVWRYPTMS 412 (415)
Q Consensus 379 ~V~~l~~s~~~~~l~s~~g~~dg--~I~vw~~~s~~ 412 (415)
.+..+.|++++..+++ ...++ .|.+|++.+++
T Consensus 337 ~~~~~~~~~~~~lv~~--~~~~g~~~l~~~~~~~g~ 370 (710)
T 2xdw_A 337 VLEWVACVRSNFLVLC--YLHDVKNTLQLHDLATGA 370 (710)
T ss_dssp EEEEEEEETTTEEEEE--EEETTEEEEEEEETTTCC
T ss_pred eEEEEEEEcCCEEEEE--EEECCEEEEEEEECCCCC
Confidence 5778999966665555 44566 46667765544
No 192
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.50 E-value=4.3e-11 Score=122.25 Aligned_cols=226 Identities=12% Similarity=0.077 Sum_probs=164.9
Q ss_pred CcEEEEE--cCCeEEEEECCCCCeEEeEecCCCCCeEEEEEcCCCCeEEEEECCCcEEEEECC--CCeeeEEecCCCccE
Q 014934 178 HNVLAVG--LGNCVYLWNACSSKVTKLCDLGIDDSVCSVGWANRNTHLAVGTSHGKVQIWDAS--RCKRVRTMEGHRLRV 253 (415)
Q Consensus 178 ~~~la~~--~d~~V~iwd~~~~~~~~~~~~~~~~~V~~v~~sp~g~~la~g~~dg~V~iwd~~--~~~~~~~l~~h~~~V 253 (415)
++.+++. .++.|.++|..++++...+..+ ..+..+.|+|||+++++++.+|.|.+||+. +.+.+..+.... ..
T Consensus 166 ~~~~~V~~~~~~~V~viD~~t~~v~~~i~~g--~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~G~-~P 242 (567)
T 1qks_A 166 ENLFSVTLRDAGQIALIDGSTYEIKTVLDTG--YAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGS-EA 242 (567)
T ss_dssp GGEEEEEETTTTEEEEEETTTCCEEEEEECS--SCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECCS-EE
T ss_pred CceEEEEeCCCCeEEEEECCCCeEEEEEeCC--CCccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEecCC-CC
Confidence 3444444 4689999999999988877643 467899999999999999999999999995 778887776543 35
Q ss_pred EEEEee------CCEEEEEe-CCCcEEEEECCCCCccEEEecc----------c-cCCeEEEEEeCCCCEEE-EEeCCCc
Q 014934 254 GALAWS------SSLLSSGS-RDKSILQRDIRAQEDFVSKLSG----------H-KSEVCGLKWSYDNRELA-SGGNDNR 314 (415)
Q Consensus 254 ~~l~~~------~~~l~sgs-~dg~I~iwd~~~~~~~~~~~~~----------h-~~~V~~l~~spdg~~la-sg~~dg~ 314 (415)
..++++ +++++++. .+++|.++|..+.+ .+..+.. | ...+..+..++++..++ ....+|.
T Consensus 243 ~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~-~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~ 321 (567)
T 1qks_A 243 RSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLE-PKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGK 321 (567)
T ss_dssp EEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCC-EEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTE
T ss_pred ceeEEccccCCCCCEEEEEEccCCeEEEEECCCCc-EEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCe
Confidence 678887 35666554 56899999998876 3444331 2 12578899998866554 4556799
Q ss_pred EEEEECCCCcee--EEeccCCCcEEEEEEcCCCCcEEEEEcCCCCCeEEEEECCCCcEEEEeeC-CCCE---EEEE-ECC
Q 014934 315 LFVWNQHSTQPV--LKYCEHTAAVKAIAWSPHLHGLLASGGGTADRCIRFWNTTTNTHLSCMDT-GSQV---CNLV-WSK 387 (415)
Q Consensus 315 I~iwd~~~~~~~--~~~~~h~~~V~~l~~sp~~~~llasggg~~d~~I~iwd~~t~~~~~~~~~-~~~V---~~l~-~s~ 387 (415)
|.++|..+.+.+ ..+ ........+.|+|++++++++.. .++.|.++|+.+++.+..+.. +... ..+. ++|
T Consensus 322 v~~vd~~~~~~~~v~~i-~~~~~~~d~~~~pdgr~~~va~~--~sn~V~ViD~~t~kl~~~i~vgg~~Phpg~g~~~~~p 398 (567)
T 1qks_A 322 ILLVDYTDLNNLKTTEI-SAERFLHDGGLDGSHRYFITAAN--ARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGANFVHP 398 (567)
T ss_dssp EEEEETTCSSEEEEEEE-ECCSSEEEEEECTTSCEEEEEEG--GGTEEEEEETTTTEEEEEEECSSSSBCCTTCEEEEET
T ss_pred EEEEecCCCccceeeee-eccccccCceECCCCCEEEEEeC--CCCeEEEEECCCCcEEEEEeccCcCCCCccceeeECC
Confidence 999998776432 222 34456778999999999888886 688999999999998887776 3211 1222 578
Q ss_pred CCCeEEEEEecCCCcEEEEECCC
Q 014934 388 NVNELVSTHGYSQNQIIVWRYPT 410 (415)
Q Consensus 388 ~~~~l~s~~g~~dg~I~vw~~~s 410 (415)
++..+.++....++.|.+++..+
T Consensus 399 ~~g~v~~t~~~g~~~Vsvid~~~ 421 (567)
T 1qks_A 399 TFGPVWATSHMGDDSVALIGTDP 421 (567)
T ss_dssp TTEEEEEEEBSSSSEEEEEECCT
T ss_pred CCCcEEEeCCCCCCeEEEecCCC
Confidence 75555443233568999999887
No 193
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.49 E-value=6.4e-13 Score=128.83 Aligned_cols=171 Identities=9% Similarity=0.001 Sum_probs=135.4
Q ss_pred CCeEEEEEcCCCCeEEEEECCCcEEEEECCCCe-----------eeEEecCCCccEEEEEeeCCEEEEEeCCCcEEEEEC
Q 014934 209 DSVCSVGWANRNTHLAVGTSHGKVQIWDASRCK-----------RVRTMEGHRLRVGALAWSSSLLSSGSRDKSILQRDI 277 (415)
Q Consensus 209 ~~V~~v~~sp~g~~la~g~~dg~V~iwd~~~~~-----------~~~~l~~h~~~V~~l~~~~~~l~sgs~dg~I~iwd~ 277 (415)
..+..+++++...++++|+.++ +.+|+++..+ ..... .+.. |..|+|++..|+++ .++.|++||+
T Consensus 38 ~~~nlLais~~~gll~a~~~~~-l~v~~~~~l~~~~~~~~~~~~~~~~~-~lp~-V~~l~fd~~~L~v~-~~~~l~v~dv 113 (388)
T 1xip_A 38 ASLQNLDISNSKSLFVAASGSK-AVVGELQLLRDHITSDSTPLTFKWEK-EIPD-VIFVCFHGDQVLVS-TRNALYSLDL 113 (388)
T ss_dssp SCCBCEEEETTTTEEEEEETTE-EEEEEHHHHHHHHHSSSCCCCCSEEE-ECTT-EEEEEEETTEEEEE-ESSEEEEEES
T ss_pred ccccEEEEcCCCCEEEEeCCCE-EEEEEhhHhhhhhccccccccceEEe-eCCC-eeEEEECCCEEEEE-cCCcEEEEEc
Confidence 3689999999999999999985 6669865332 11222 3556 99999987889888 8899999999
Q ss_pred CCCCccEEEeccccCCeEEEEEeCCCCEEEEEeCCCcEEEEECCCCceeEEeccCCCcEEEEEEcCCCCcEEEEEcCCCC
Q 014934 278 RAQEDFVSKLSGHKSEVCGLKWSYDNRELASGGNDNRLFVWNQHSTQPVLKYCEHTAAVKAIAWSPHLHGLLASGGGTAD 357 (415)
Q Consensus 278 ~~~~~~~~~~~~h~~~V~~l~~spdg~~lasg~~dg~I~iwd~~~~~~~~~~~~h~~~V~~l~~sp~~~~llasggg~~d 357 (415)
++.. .......|...+.++.+.+. .+|++..||.|.+||+.++.... +...|++++|+|.| + +.|. .|
T Consensus 114 ~sl~-~~~~~~~~~~~v~~i~~~~p--~~av~~~dG~L~v~dl~~~~~~~----~~~~Vs~v~WSpkG--~-~vg~--~d 181 (388)
T 1xip_A 114 EELS-EFRTVTSFEKPVFQLKNVNN--TLVILNSVNDLSALDLRTKSTKQ----LAQNVTSFDVTNSQ--L-AVLL--KD 181 (388)
T ss_dssp SSTT-CEEEEEECSSCEEEEEECSS--EEEEEETTSEEEEEETTTCCEEE----EEESEEEEEECSSE--E-EEEE--TT
T ss_pred hhhh-ccCccceeecceeeEEecCC--CEEEEECCCCEEEEEccCCcccc----ccCCceEEEEcCCc--e-EEEE--cC
Confidence 8876 34556677888998888754 38999999999999999887643 45689999999998 3 3444 69
Q ss_pred CeEEEEECCCCcE--EEEe------e----CCCCEEEEEECCCCCeEEEE
Q 014934 358 RCIRFWNTTTNTH--LSCM------D----TGSQVCNLVWSKNVNELVST 395 (415)
Q Consensus 358 ~~I~iwd~~t~~~--~~~~------~----~~~~V~~l~~s~~~~~l~s~ 395 (415)
|.|++|+...++. ..++ . +...|.++.|.+++.++++-
T Consensus 182 g~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~y 231 (388)
T 1xip_A 182 RSFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAVF 231 (388)
T ss_dssp SCEEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEEE
T ss_pred CcEEEEcCCCccccccceecCCcccccccCCCeeEEEEEEecCCeEEEEE
Confidence 9999999888775 5566 2 46779999999999988874
No 194
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.49 E-value=6.1e-11 Score=111.00 Aligned_cols=220 Identities=14% Similarity=0.113 Sum_probs=151.9
Q ss_pred ceeEeecCC--CcEEEEE-cCCeEEEEECCCCCeEEeEecCCCCCeEEEEEcCCCCeEEEEECCCcEEEEECCCCeeeEE
Q 014934 169 YLNLVDWSS--HNVLAVG-LGNCVYLWNACSSKVTKLCDLGIDDSVCSVGWANRNTHLAVGTSHGKVQIWDASRCKRVRT 245 (415)
Q Consensus 169 ~i~~l~ws~--~~~la~~-~d~~V~iwd~~~~~~~~~~~~~~~~~V~~v~~sp~g~~la~g~~dg~V~iwd~~~~~~~~~ 245 (415)
......|++ +.++.+. .++.|+.|+..+++.. .+. ....+.+++++++|+++ ++. ++.|.+||..+++....
T Consensus 14 ~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~~-~~~--~~~~~~~i~~~~dG~l~-v~~-~~~l~~~d~~~g~~~~~ 88 (297)
T 3g4e_A 14 CGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQVQ-RVT--MDAPVSSVALRQSGGYV-ATI-GTKFCALNWKEQSAVVL 88 (297)
T ss_dssp BEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEE-EEE--CSSCEEEEEEBTTSSEE-EEE-TTEEEEEETTTTEEEEE
T ss_pred cccCCeEECCCCEEEEEECCCCEEEEEECCCCcEE-EEe--CCCceEEEEECCCCCEE-EEE-CCeEEEEECCCCcEEEE
Confidence 466889998 4556665 4689999999988763 332 34689999999999954 445 56799999988764433
Q ss_pred ecC----CCccEEEEEee--CCEEEEEeC---------CCcEEEEECCCCCccEEEeccccCCeEEEEEeCCCCEEE-EE
Q 014934 246 MEG----HRLRVGALAWS--SSLLSSGSR---------DKSILQRDIRAQEDFVSKLSGHKSEVCGLKWSYDNRELA-SG 309 (415)
Q Consensus 246 l~~----h~~~V~~l~~~--~~~l~sgs~---------dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~spdg~~la-sg 309 (415)
... ....+.+++++ ++++++... .....+|.+..... ...+..+.....+++|+||++.|+ +.
T Consensus 89 ~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~-~~~~~~~~~~pngi~~spdg~~lyv~~ 167 (297)
T 3g4e_A 89 ATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHH-VKKYFDQVDISNGLDWSLDHKIFYYID 167 (297)
T ss_dssp EECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSC-EEEEEEEESBEEEEEECTTSCEEEEEE
T ss_pred EecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCCC-EEEEeeccccccceEEcCCCCEEEEec
Confidence 221 23468889887 454444322 12334454443332 233333445578999999998765 45
Q ss_pred eCCCcEEEEEC--CCCce-----eEEeccCCCcEEEEEEcCCCCcEEEEEcCCCCCeEEEEECCCCcEEEEeeCC-CCEE
Q 014934 310 GNDNRLFVWNQ--HSTQP-----VLKYCEHTAAVKAIAWSPHLHGLLASGGGTADRCIRFWNTTTNTHLSCMDTG-SQVC 381 (415)
Q Consensus 310 ~~dg~I~iwd~--~~~~~-----~~~~~~h~~~V~~l~~sp~~~~llasggg~~d~~I~iwd~~t~~~~~~~~~~-~~V~ 381 (415)
+.++.|.+||+ .++.. +..+..+......+++.++|. ++++.. ..+.|..||..+|+.+..+... ..++
T Consensus 168 ~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~-lwva~~--~~~~v~~~d~~tG~~~~~i~~p~~~~t 244 (297)
T 3g4e_A 168 SLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGK-LWVACY--NGGRVIRLDPVTGKRLQTVKLPVDKTT 244 (297)
T ss_dssp GGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSC-EEEEEE--TTTEEEEECTTTCCEEEEEECSSSBEE
T ss_pred CCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCC-EEEEEc--CCCEEEEEcCCCceEEEEEECCCCCce
Confidence 56789999987 45542 223334456788999999996 666654 4688999999999999888865 6799
Q ss_pred EEEEC-CCCCeEEEEEe
Q 014934 382 NLVWS-KNVNELVSTHG 397 (415)
Q Consensus 382 ~l~~s-~~~~~l~s~~g 397 (415)
+++|. |+++.|.+++.
T Consensus 245 ~~~f~g~d~~~L~vt~~ 261 (297)
T 3g4e_A 245 SCCFGGKNYSEMYVTCA 261 (297)
T ss_dssp EEEEESGGGCEEEEEEB
T ss_pred EEEEeCCCCCEEEEEcC
Confidence 99998 89888877654
No 195
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.48 E-value=4.3e-11 Score=122.20 Aligned_cols=240 Identities=13% Similarity=0.079 Sum_probs=172.9
Q ss_pred cceeEeecCC-CcEEEEE-cCCeEEEEECC--CCCeEEeEecCCCCCeEEEEEc----CCCCeEEEEEC-CCcEEEEECC
Q 014934 168 FYLNLVDWSS-HNVLAVG-LGNCVYLWNAC--SSKVTKLCDLGIDDSVCSVGWA----NRNTHLAVGTS-HGKVQIWDAS 238 (415)
Q Consensus 168 ~~i~~l~ws~-~~~la~~-~d~~V~iwd~~--~~~~~~~~~~~~~~~V~~v~~s----p~g~~la~g~~-dg~V~iwd~~ 238 (415)
..+..+.++| ++++.++ .++.|.+||+. +++....+.. ......++|+ |||+++++++. ++.|.++|..
T Consensus 197 ~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~--G~~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~ 274 (567)
T 1qks_A 197 YAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKI--GSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGE 274 (567)
T ss_dssp SCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEEC--CSEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETT
T ss_pred CCccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEec--CCCCceeEEccccCCCCCEEEEEEccCCeEEEEECC
Confidence 3466889999 6665555 57899999996 7777766653 3457899999 69998888765 5899999999
Q ss_pred CCeeeEEecC----------C-CccEEEEEee---CCEEEEEeCCCcEEEEECCCCCccEEEeccccCCeEEEEEeCCCC
Q 014934 239 RCKRVRTMEG----------H-RLRVGALAWS---SSLLSSGSRDKSILQRDIRAQEDFVSKLSGHKSEVCGLKWSYDNR 304 (415)
Q Consensus 239 ~~~~~~~l~~----------h-~~~V~~l~~~---~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~spdg~ 304 (415)
+.+.+..+.. | ..++..+..+ +.+++....+|.|.++|...................++.|+|+|+
T Consensus 275 t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~~~~~~~v~~i~~~~~~~d~~~~pdgr 354 (567)
T 1qks_A 275 TLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKTTEISAERFLHDGGLDGSHR 354 (567)
T ss_dssp TCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSEEEEEEEECCSSEEEEEECTTSC
T ss_pred CCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeEEEEecCCCccceeeeeeccccccCceECCCCC
Confidence 9988877652 1 1267777776 346666777899999998776432222223345677899999999
Q ss_pred EEEEEe-CCCcEEEEECCCCceeEEecc-----CCCcEEEEEEcCCCCcEEEEEcCCCCCeEEEEECCC-------CcEE
Q 014934 305 ELASGG-NDNRLFVWNQHSTQPVLKYCE-----HTAAVKAIAWSPHLHGLLASGGGTADRCIRFWNTTT-------NTHL 371 (415)
Q Consensus 305 ~lasg~-~dg~I~iwd~~~~~~~~~~~~-----h~~~V~~l~~sp~~~~llasggg~~d~~I~iwd~~t-------~~~~ 371 (415)
+|+++. .++.|.++|+.+++.+..+.- |.+....+ ++|++..+++++. ..++.|.++|+.+ .+.+
T Consensus 355 ~~~va~~~sn~V~ViD~~t~kl~~~i~vgg~~Phpg~g~~~-~~p~~g~v~~t~~-~g~~~Vsvid~~~~~~~~~~~kvv 432 (567)
T 1qks_A 355 YFITAANARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGANF-VHPTFGPVWATSH-MGDDSVALIGTDPEGHPDNAWKIL 432 (567)
T ss_dssp EEEEEEGGGTEEEEEETTTTEEEEEEECSSSSBCCTTCEEE-EETTTEEEEEEEB-SSSSEEEEEECCTTTCTTTBTSEE
T ss_pred EEEEEeCCCCeEEEEECCCCcEEEEEeccCcCCCCccceee-ECCCCCcEEEeCC-CCCCeEEEecCCCCCCccccCEEE
Confidence 987765 578999999999987766543 33222222 6887666777663 1368999999988 5678
Q ss_pred EEeeCC-CCEEEEEECCCCCeEEEEEe-cC----CCcEEEEECCCC
Q 014934 372 SCMDTG-SQVCNLVWSKNVNELVSTHG-YS----QNQIIVWRYPTM 411 (415)
Q Consensus 372 ~~~~~~-~~V~~l~~s~~~~~l~s~~g-~~----dg~I~vw~~~s~ 411 (415)
+.+... ..-..+..+|++++|.+... .. .+.|.|+|+.++
T Consensus 433 ~~i~~~g~g~~~i~~~p~~~~l~v~~~~~~~~~~~~~v~v~d~~~~ 478 (567)
T 1qks_A 433 DSFPALGGGSLFIKTHPNSQYLYVDATLNPEAEISGSVAVFDIKAM 478 (567)
T ss_dssp EEEECSCSCCCCEECCTTCSEEEEECTTCSSHHHHTCEEEEEGGGC
T ss_pred EEEecCCCCCEEEEeCCCCCeEEEecCCCCCcccCceEEEEECCcc
Confidence 888754 33355789999999988431 11 359999999877
No 196
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.48 E-value=1.4e-11 Score=118.99 Aligned_cols=239 Identities=10% Similarity=0.023 Sum_probs=167.3
Q ss_pred eecCC-CcEEEEEc-----------CCeEEEEECCCCCeEEeEecCC------CCCeEEEEEcCCCCeEEEEEC--CCcE
Q 014934 173 VDWSS-HNVLAVGL-----------GNCVYLWNACSSKVTKLCDLGI------DDSVCSVGWANRNTHLAVGTS--HGKV 232 (415)
Q Consensus 173 l~ws~-~~~la~~~-----------d~~V~iwd~~~~~~~~~~~~~~------~~~V~~v~~sp~g~~la~g~~--dg~V 232 (415)
+.++| ++.|.++. ++.|.+||..+.++...+.++. ......+.++|||++|.++.. ++.|
T Consensus 83 va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~V 162 (386)
T 3sjl_D 83 PVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAV 162 (386)
T ss_dssp EEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEE
T ss_pred EEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeE
Confidence 77888 56555543 4679999999999888776543 135677999999999998874 6899
Q ss_pred EEEECCCCeeeEEecCCCccEEEEEeeCCEEEEEeCCCcEEEEECCCCCccEEEeccc----cCCeE-EEEEe-CCCCEE
Q 014934 233 QIWDASRCKRVRTMEGHRLRVGALAWSSSLLSSGSRDKSILQRDIRAQEDFVSKLSGH----KSEVC-GLKWS-YDNREL 306 (415)
Q Consensus 233 ~iwd~~~~~~~~~l~~h~~~V~~l~~~~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h----~~~V~-~l~~s-pdg~~l 306 (415)
.++|+.+++.+.++... +.........+.+++.+.||.+.+.++....+.......+ ...+. ...|. ++|+++
T Consensus 163 sVID~~t~~vv~tI~v~-g~~~~~P~g~~~~~~~~~DG~~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~dG~~~ 241 (386)
T 3sjl_D 163 GVVDLEGKAFKRMLDVP-DCYHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGRLV 241 (386)
T ss_dssp EEEETTTTEEEEEEECC-SEEEEEEEETTEEEEEETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETTTTEEE
T ss_pred EEEECCCCcEEEEEECC-CcceeecCCCceeEEECCCCCEEEEECCCCCeEEEeecceeccccccccccceeEcCCCcEE
Confidence 99999999999888632 2111111225778888999999999998633332221111 12221 24564 577554
Q ss_pred EEEeCCCcEEEEECCCCce--eEEec---c-------CCCcEEEEEEcCCCCcEEEEEcC----C---CCCeEEEEECCC
Q 014934 307 ASGGNDNRLFVWNQHSTQP--VLKYC---E-------HTAAVKAIAWSPHLHGLLASGGG----T---ADRCIRFWNTTT 367 (415)
Q Consensus 307 asg~~dg~I~iwd~~~~~~--~~~~~---~-------h~~~V~~l~~sp~~~~llasggg----~---~d~~I~iwd~~t 367 (415)
+ .+.+|.|++.|+.+... +..+. . .......++++++++.++++... + ..+.|.+.|+.+
T Consensus 242 ~-vs~~g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t 320 (386)
T 3sjl_D 242 W-PTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKT 320 (386)
T ss_dssp E-EBTTSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTT
T ss_pred E-EeCCCEEEEEECCCCcceeecceeccccccccccccCCCcceeeECCCCCeEEEEeccccccccCCCCCEEEEEECCC
Confidence 4 56689999999976642 22221 0 11233457789999888887520 0 125799999999
Q ss_pred CcEEEEeeCCCCEEEEEECCCCC-eEEEEEecCCCcEEEEECCCCccc
Q 014934 368 NTHLSCMDTGSQVCNLVWSKNVN-ELVSTHGYSQNQIIVWRYPTMSKV 414 (415)
Q Consensus 368 ~~~~~~~~~~~~V~~l~~s~~~~-~l~s~~g~~dg~I~vw~~~s~~~l 414 (415)
++.+..+..+..+.++.+++|++ .|+++. ..++.|.++|..+++.+
T Consensus 321 ~kv~~~i~vg~~~~~lavs~D~~~~ly~tn-~~~~~VsViD~~t~k~~ 367 (386)
T 3sjl_D 321 GERLAKFEMGHEIDSINVSQDEKPLLYALS-TGDKTLYIHDAESGEEL 367 (386)
T ss_dssp CCEEEEEEEEEEECEEEECSSSSCEEEEEE-TTTTEEEEEETTTCCEE
T ss_pred CeEEEEEECCCCcceEEECCCCCeEEEEEc-CCCCeEEEEECCCCcEE
Confidence 99999999888999999999997 666653 46889999999988753
No 197
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.47 E-value=4.3e-10 Score=103.97 Aligned_cols=231 Identities=10% Similarity=-0.052 Sum_probs=160.6
Q ss_pred cceeEeecCC-CcEEEEEc-CCeEEEEECCCCCeEEeEecCCCCCeEEEEEcCCCCeEEEEECCCcEEEEECCCCeeeEE
Q 014934 168 FYLNLVDWSS-HNVLAVGL-GNCVYLWNACSSKVTKLCDLGIDDSVCSVGWANRNTHLAVGTSHGKVQIWDASRCKRVRT 245 (415)
Q Consensus 168 ~~i~~l~ws~-~~~la~~~-d~~V~iwd~~~~~~~~~~~~~~~~~V~~v~~sp~g~~la~g~~dg~V~iwd~~~~~~~~~ 245 (415)
..+..+.+++ ++++++.. ++.|+.|+.. ++............+.++++.++|.++++...++.|.+||. +++....
T Consensus 57 ~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~~ 134 (299)
T 2z2n_A 57 AKVMCLTISSDGEVWFTENAANKIGRITKK-GIIKEYTLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGKIREY 134 (299)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEE
T ss_pred CceeeEEECCCCCEEEeCCCCCeEEEECCC-CcEEEEeCCCcCCCceeeEECCCCCEEEEecCCceEEEECC-CCCEEEe
Confidence 3577888888 66666665 6789999986 45433221124567999999999987777667889999998 5543332
Q ss_pred -ecCCCccEEEEEee--CCEEEEEeCCCcEEEEECCCCCccEEEeccccCCeEEEEEeCCCCEEEEEeCCCcEEEEECCC
Q 014934 246 -MEGHRLRVGALAWS--SSLLSSGSRDKSILQRDIRAQEDFVSKLSGHKSEVCGLKWSYDNRELASGGNDNRLFVWNQHS 322 (415)
Q Consensus 246 -l~~h~~~V~~l~~~--~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~spdg~~lasg~~dg~I~iwd~~~ 322 (415)
...+...+.++++. +.++++...++.|..||. ++.........+...+.+++++++|+++++...++.|.+||. +
T Consensus 135 ~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~ 212 (299)
T 2z2n_A 135 ELPNKGSYPSFITLGSDNALWFTENQNNAIGRITE-SGDITEFKIPTPASGPVGITKGNDDALWFVEIIGNKIGRITT-S 212 (299)
T ss_dssp ECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-T
T ss_pred cCCCCCCCCceEEEcCCCCEEEEeCCCCEEEEEcC-CCcEEEeeCCCCCCcceeEEECCCCCEEEEccCCceEEEECC-C
Confidence 33345678899988 355555556789999998 544211123334567889999999998877777889999999 6
Q ss_pred CceeE-EeccCCCcEEEEEEcCCCCcEEEEEcCCCCCeEEEEECCCCcEEEEee---CCCCEEEEEECCCCCeEEEEEec
Q 014934 323 TQPVL-KYCEHTAAVKAIAWSPHLHGLLASGGGTADRCIRFWNTTTNTHLSCMD---TGSQVCNLVWSKNVNELVSTHGY 398 (415)
Q Consensus 323 ~~~~~-~~~~h~~~V~~l~~sp~~~~llasggg~~d~~I~iwd~~t~~~~~~~~---~~~~V~~l~~s~~~~~l~s~~g~ 398 (415)
++... ....+...+.++++.++|. ++++.. .++.|..||. +++ +..+. ....+.++++ ++++.+++ ..
T Consensus 213 g~~~~~~~~~~~~~~~~i~~~~~g~-l~v~~~--~~~~i~~~d~-~g~-~~~~~~~~~~~~~~~i~~-~~g~l~v~--~~ 284 (299)
T 2z2n_A 213 GEITEFKIPTPNARPHAITAGAGID-LWFTEW--GANKIGRLTS-NNI-IEEYPIQIKSAEPHGICF-DGETIWFA--ME 284 (299)
T ss_dssp CCEEEEECSSTTCCEEEEEECSTTC-EEEEET--TTTEEEEEET-TTE-EEEEECSSSSCCEEEEEE-CSSCEEEE--ET
T ss_pred CcEEEEECCCCCCCceeEEECCCCC-EEEecc--CCceEEEECC-CCc-eEEEeCCCCCCccceEEe-cCCCEEEE--ec
Confidence 65432 2233556789999999987 777654 4789999998 454 33332 3467899999 88887766 33
Q ss_pred CCCcEEEEECCCC
Q 014934 399 SQNQIIVWRYPTM 411 (415)
Q Consensus 399 ~dg~I~vw~~~s~ 411 (415)
.+.|..++..+.
T Consensus 285 -~~~l~~~~~~~~ 296 (299)
T 2z2n_A 285 -CDKIGKLTLIKD 296 (299)
T ss_dssp -TTEEEEEEEC--
T ss_pred -CCcEEEEEcCcc
Confidence 567888887654
No 198
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.46 E-value=2.9e-11 Score=115.05 Aligned_cols=217 Identities=10% Similarity=0.004 Sum_probs=156.2
Q ss_pred CCeEEEEECCCCCeEEeEec-----CCCCCeEEEEEcCCCCeEEEEECCCcEEEEECCCCeeeEEecCCCccEEEEEee-
Q 014934 186 GNCVYLWNACSSKVTKLCDL-----GIDDSVCSVGWANRNTHLAVGTSHGKVQIWDASRCKRVRTMEGHRLRVGALAWS- 259 (415)
Q Consensus 186 d~~V~iwd~~~~~~~~~~~~-----~~~~~V~~v~~sp~g~~la~g~~dg~V~iwd~~~~~~~~~l~~h~~~V~~l~~~- 259 (415)
++.|.+||..++++...+.. ........+.+. +++..++...++.|.+||..+++.+..+. .......++++
T Consensus 16 ~~~l~~~d~~t~~~~~~i~~~~n~~~lg~~~~~i~~~-~~~lyv~~~~~~~v~viD~~t~~~~~~i~-~~~~p~~i~~~~ 93 (328)
T 3dsm_A 16 NATLSYYDPATCEVENEVFYRANGFKLGDVAQSMVIR-DGIGWIVVNNSHVIFAIDINTFKEVGRIT-GFTSPRYIHFLS 93 (328)
T ss_dssp CBEEEEEETTTTEEECSHHHHHHSSCCBSCEEEEEEE-TTEEEEEEGGGTEEEEEETTTCCEEEEEE-CCSSEEEEEEEE
T ss_pred CceEEEEECCCCEEhhhhHhhhcCcccCccceEEEEE-CCEEEEEEcCCCEEEEEECcccEEEEEcC-CCCCCcEEEEeC
Confidence 57899999999987654311 122456778774 34455555567899999999999988885 34668888884
Q ss_pred CCEEEEEe-CCCcEEEEECCCCCccEEEecccc-----CCeEEEEEeCCCCEEEEEe-CCCcEEEEECCCCceeEEeccC
Q 014934 260 SSLLSSGS-RDKSILQRDIRAQEDFVSKLSGHK-----SEVCGLKWSYDNRELASGG-NDNRLFVWNQHSTQPVLKYCEH 332 (415)
Q Consensus 260 ~~~l~sgs-~dg~I~iwd~~~~~~~~~~~~~h~-----~~V~~l~~spdg~~lasg~-~dg~I~iwd~~~~~~~~~~~~h 332 (415)
...++++. .++.|.+||..+.. ....+.... ....++++ .++.++++.. .++.|.+||+.+++.+..+..
T Consensus 94 ~g~lyv~~~~~~~v~~iD~~t~~-~~~~i~~g~~~~~~~~p~~i~~-~~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~- 170 (328)
T 3dsm_A 94 DEKAYVTQIWDYRIFIINPKTYE-ITGYIECPDMDMESGSTEQMVQ-YGKYVYVNCWSYQNRILKIDTETDKVVDELTI- 170 (328)
T ss_dssp TTEEEEEEBSCSEEEEEETTTTE-EEEEEECTTCCTTTCBCCCEEE-ETTEEEEEECTTCCEEEEEETTTTEEEEEEEC-
T ss_pred CCeEEEEECCCCeEEEEECCCCe-EEEEEEcCCccccCCCcceEEE-ECCEEEEEcCCCCCEEEEEECCCCeEEEEEEc-
Confidence 44666665 89999999998876 344443222 14566777 3444444443 488999999999988877754
Q ss_pred CCcEEEEEEcCCCCcEEEEEcCCC--------CCeEEEEECCCCcEEEEeeC--CCCEEEEEECCCCCeEEEEEecCCCc
Q 014934 333 TAAVKAIAWSPHLHGLLASGGGTA--------DRCIRFWNTTTNTHLSCMDT--GSQVCNLVWSKNVNELVSTHGYSQNQ 402 (415)
Q Consensus 333 ~~~V~~l~~sp~~~~llasggg~~--------d~~I~iwd~~t~~~~~~~~~--~~~V~~l~~s~~~~~l~s~~g~~dg~ 402 (415)
......++++|+|+ +++++.+.. .+.|.++|..+++....+.. +.....++|+|+++.|.++ . +.
T Consensus 171 g~~p~~i~~~~dG~-l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~~~lyv~--~--~~ 245 (328)
T 3dsm_A 171 GIQPTSLVMDKYNK-MWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRDTLYWI--N--ND 245 (328)
T ss_dssp SSCBCCCEECTTSE-EEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCTTCCCEEEEECTTSCEEEEE--S--SS
T ss_pred CCCccceEEcCCCC-EEEEECCCccCCccccCCceEEEEECCCCeEEEEEecCCCCCceeEEEecCCCEEEEE--c--cE
Confidence 33457889999987 666654211 27899999999998877764 4578999999999999883 2 28
Q ss_pred EEEEECCCCc
Q 014934 403 IIVWRYPTMS 412 (415)
Q Consensus 403 I~vw~~~s~~ 412 (415)
|.+||..+.+
T Consensus 246 v~~~d~~t~~ 255 (328)
T 3dsm_A 246 IWRMPVEADR 255 (328)
T ss_dssp EEEEETTCSS
T ss_pred EEEEECCCCc
Confidence 9999987754
No 199
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.46 E-value=1e-11 Score=119.88 Aligned_cols=213 Identities=8% Similarity=0.002 Sum_probs=148.9
Q ss_pred ceeEeecCC-CcEEEEEc---CCeEEEEECCCCCeEEe-EecCCCCCeEEEEEcCCC-CeEEEEECCCcEEEEECCC-Ce
Q 014934 169 YLNLVDWSS-HNVLAVGL---GNCVYLWNACSSKVTKL-CDLGIDDSVCSVGWANRN-THLAVGTSHGKVQIWDASR-CK 241 (415)
Q Consensus 169 ~i~~l~ws~-~~~la~~~---d~~V~iwd~~~~~~~~~-~~~~~~~~V~~v~~sp~g-~~la~g~~dg~V~iwd~~~-~~ 241 (415)
....+.++| +++|.++. ++.|.+||+.+++.... +.. .....+.+.|++ ..+++.+.||.+.+|+... ++
T Consensus 109 ~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~~~~~~i~~---~~~~~v~~~p~~~~~~~~~~~dg~~~~v~~~~~g~ 185 (361)
T 2oiz_A 109 YDGLFRQTTDGKFIVLQNASPATSIGIVDVAKGDYVEDVTAA---AGCWSVIPQPNRPRSFMTICGDGGLLTINLGEDGK 185 (361)
T ss_dssp CGGGEEECTTSSEEEEEEESSSEEEEEEETTTTEEEEEEGGG---TTEEEEEECTTSSSEEEEEETTSSEEEEEECTTSS
T ss_pred CcceEEECCCCCEEEEECCCCCCeEEEEECCCCcEEEEEecC---CCcceeEEcCCCCeeEEEECCCCcEEEEEECCCCc
Confidence 345678998 77777763 47899999999987665 432 223346677876 6778888999999999865 44
Q ss_pred eeEE------ecCCCccEEE-EEeeCCEEEEEeCCCcEEEEECCCCCccE-EEec--c----c----cCCeEEEEEeCCC
Q 014934 242 RVRT------MEGHRLRVGA-LAWSSSLLSSGSRDKSILQRDIRAQEDFV-SKLS--G----H----KSEVCGLKWSYDN 303 (415)
Q Consensus 242 ~~~~------l~~h~~~V~~-l~~~~~~l~sgs~dg~I~iwd~~~~~~~~-~~~~--~----h----~~~V~~l~~spdg 303 (415)
.... +..+..++.. ..-.+..++..+.++.|.++|+......+ ..+. . + ......++++|++
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a~~~dg 265 (361)
T 2oiz_A 186 VASQSRSKQMFSVKDDPIFIAPALDKDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLVGLHRAS 265 (361)
T ss_dssp EEEEEECCCCSCTTTSCBCSCCEECSSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCEEEETTT
T ss_pred EeeeccccceEcCCCCceEEEecccCCEEEEEeCCCeEEEEEecCCCceecccccccCccccccccccCCeeEEEEecCC
Confidence 4311 1222222110 01124566667788999999997654211 1111 0 0 0112237899998
Q ss_pred CEEEEEeC-----------CCcEEEEECCCCceeEEeccCCCcEEEEEEcCCCCcEEEEEcCCCCCeEEEEECCCC--cE
Q 014934 304 RELASGGN-----------DNRLFVWNQHSTQPVLKYCEHTAAVKAIAWSPHLHGLLASGGGTADRCIRFWNTTTN--TH 370 (415)
Q Consensus 304 ~~lasg~~-----------dg~I~iwd~~~~~~~~~~~~h~~~V~~l~~sp~~~~llasggg~~d~~I~iwd~~t~--~~ 370 (415)
+.++++.. .+.|.+||+.+++.+.++..+. +.+++|+|+|+.|+ +++ . +.|.+||+.++ +.
T Consensus 266 ~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~~~~--p~~ia~spdg~~l~-v~n--~-~~v~v~D~~t~~l~~ 339 (361)
T 2oiz_A 266 GRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIPGRD--ALSMTIDQQRNLML-TLD--G-GNVNVYDISQPEPKL 339 (361)
T ss_dssp TEEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEEECTT--CCEEEEETTTTEEE-EEC--S-SCEEEEECSSSSCEE
T ss_pred CeEEEEEccCCCcccccCCCceEEEEECCCCcEEEEEecCC--eeEEEECCCCCEEE-EeC--C-CeEEEEECCCCccee
Confidence 88777543 3589999999999999998776 99999999999555 443 4 99999999999 99
Q ss_pred EEEe-eCCCCEEEEEECCCCC
Q 014934 371 LSCM-DTGSQVCNLVWSKNVN 390 (415)
Q Consensus 371 ~~~~-~~~~~V~~l~~s~~~~ 390 (415)
+..+ ..+.....+.++|+|+
T Consensus 340 ~~~i~~~G~~P~~~~~~p~G~ 360 (361)
T 2oiz_A 340 LRTIEGAAEASLQVQFHPVGG 360 (361)
T ss_dssp EEEETTSCSSEEEEEECCCSC
T ss_pred eEEeccCCCCcEEEEecCCCC
Confidence 9997 5788889999999986
No 200
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.46 E-value=5.5e-10 Score=103.31 Aligned_cols=231 Identities=10% Similarity=-0.068 Sum_probs=162.6
Q ss_pred cceeEeecCC-CcEEEEE-cCCeEEEEECCCCCeEEeEecCCCCCeEEEEEcCCCCeEEEEECCCcEEEEECCCCeeeE-
Q 014934 168 FYLNLVDWSS-HNVLAVG-LGNCVYLWNACSSKVTKLCDLGIDDSVCSVGWANRNTHLAVGTSHGKVQIWDASRCKRVR- 244 (415)
Q Consensus 168 ~~i~~l~ws~-~~~la~~-~d~~V~iwd~~~~~~~~~~~~~~~~~V~~v~~sp~g~~la~g~~dg~V~iwd~~~~~~~~- 244 (415)
.....+.+.+ +++.++. .++.|.+|+.. ++............+.++++.++|.++++...++.|..||.. ++...
T Consensus 20 ~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g~~~~~ 97 (300)
T 2qc5_A 20 SGPYGITSSEDGKVWFTQHKANKISSLDQS-GRIKEFEVPTPDAKVMCLIVSSLGDIWFTENGANKIGKLSKK-GGFTEY 97 (300)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEE
T ss_pred CCcceeeECCCCCEEEEcCCCCeEEEECCC-CceEEEECCCCCCcceeEEECCCCCEEEEecCCCeEEEECCC-CCeEEe
Confidence 3567888888 6666666 46899999988 666543221234679999999999877766667889999987 55432
Q ss_pred EecCCCccEEEEEee--CCEEEEEeCCCcEEEEECCCCCccEEEeccccCCeEEEEEeCCCCEEEEEeCCCcEEEEECCC
Q 014934 245 TMEGHRLRVGALAWS--SSLLSSGSRDKSILQRDIRAQEDFVSKLSGHKSEVCGLKWSYDNRELASGGNDNRLFVWNQHS 322 (415)
Q Consensus 245 ~l~~h~~~V~~l~~~--~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~spdg~~lasg~~dg~I~iwd~~~ 322 (415)
.+......+.++++. +.++++...++.|..+|.. +......+......+.++++.++|+++++...++.|.+||. +
T Consensus 98 ~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~ 175 (300)
T 2qc5_A 98 PLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIYEYDLPNKGSYPAFITLGSDNALWFTENQNNSIGRITN-T 175 (300)
T ss_dssp ECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-T
T ss_pred cCCCCCCCCccceECCCCCEEEEccCCCeEEEECCC-CCEEEccCCCCCCCceeEEECCCCCEEEEecCCCeEEEECC-C
Confidence 223344678889887 4566666568889999987 43221223334567899999999997777766889999998 5
Q ss_pred CceeE-EeccCCCcEEEEEEcCCCCcEEEEEcCCCCCeEEEEECCCCcEEEEe-e-CCCCEEEEEECCCCCeEEEEEecC
Q 014934 323 TQPVL-KYCEHTAAVKAIAWSPHLHGLLASGGGTADRCIRFWNTTTNTHLSCM-D-TGSQVCNLVWSKNVNELVSTHGYS 399 (415)
Q Consensus 323 ~~~~~-~~~~h~~~V~~l~~sp~~~~llasggg~~d~~I~iwd~~t~~~~~~~-~-~~~~V~~l~~s~~~~~l~s~~g~~ 399 (415)
++... ....+...+.++++.+++. ++++.. ..+.|.+||. +++..... . ....+.+++++++|+.+++ ...
T Consensus 176 g~~~~~~~~~~~~~~~~i~~d~~g~-l~v~~~--~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~--~~~ 249 (300)
T 2qc5_A 176 GKLEEYPLPTNAAAPVGITSGNDGA-LWFVEI--MGNKIGRITT-TGEISEYDIPTPNARPHAITAGKNSEIWFT--EWG 249 (300)
T ss_dssp CCEEEEECSSTTCCEEEEEECTTSS-EEEEET--TTTEEEEECT-TCCEEEEECSSTTCCEEEEEECSTTCEEEE--ETT
T ss_pred CcEEEeeCCCCCCCcceEEECCCCC-EEEEcc--CCCEEEEEcC-CCcEEEEECCCCCCCceEEEECCCCCEEEe--ccC
Confidence 55433 2223456789999999885 776654 4678999998 56544332 2 3466899999999987666 445
Q ss_pred CCcEEEEEC
Q 014934 400 QNQIIVWRY 408 (415)
Q Consensus 400 dg~I~vw~~ 408 (415)
++.|..|+.
T Consensus 250 ~~~i~~~~~ 258 (300)
T 2qc5_A 250 ANQIGRITN 258 (300)
T ss_dssp TTEEEEECT
T ss_pred CCeEEEECC
Confidence 678888886
No 201
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.45 E-value=7.4e-12 Score=116.34 Aligned_cols=184 Identities=13% Similarity=0.024 Sum_probs=145.1
Q ss_pred CCCeEEEEECCCcEEEEECCCCeeeEEecCCC-ccEEEEEee--CCEEEEEeCCCcEEEEECCCCCccEEEeccc-cCCe
Q 014934 219 RNTHLAVGTSHGKVQIWDASRCKRVRTMEGHR-LRVGALAWS--SSLLSSGSRDKSILQRDIRAQEDFVSKLSGH-KSEV 294 (415)
Q Consensus 219 ~g~~la~g~~dg~V~iwd~~~~~~~~~l~~h~-~~V~~l~~~--~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h-~~~V 294 (415)
.+++|++++.++.|.+||.++++.+..+..+. ..+.++.+. +++|+ +.++.|..||. +++ .+..+..+ ...+
T Consensus 4 ~~~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~ilv--s~~~~V~~~d~-~G~-~~W~~~~~~~~~~ 79 (276)
T 3no2_A 4 PQHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILF--SYSKGAKMITR-DGR-ELWNIAAPAGCEM 79 (276)
T ss_dssp CCEEEEECTTCSEEEEEETTTTEEEEEEECCTTCCCCEEEECTTSCEEE--ECBSEEEEECT-TSC-EEEEEECCTTCEE
T ss_pred CCcEEEeeCCCCEEEEEECCCCeEEEEeCCCccCCCcCeEECCCCCEEE--eCCCCEEEECC-CCC-EEEEEcCCCCccc
Confidence 46789999999999999999999999888765 467777776 56777 45788999998 565 45556554 3578
Q ss_pred EEEEEeCCCCEEEEEeC-CCcEEEEECCCCceeEEecc------CCCcEEEEEEcCCCCcEEEEEcCCCCCeEEEEECCC
Q 014934 295 CGLKWSYDNRELASGGN-DNRLFVWNQHSTQPVLKYCE------HTAAVKAIAWSPHLHGLLASGGGTADRCIRFWNTTT 367 (415)
Q Consensus 295 ~~l~~spdg~~lasg~~-dg~I~iwd~~~~~~~~~~~~------h~~~V~~l~~sp~~~~llasggg~~d~~I~iwd~~t 367 (415)
.++.+.++|+++++.+. ++.|..+|. +++.+.++.. +......+++.++|. ++++.. .++.|..||..
T Consensus 80 ~~~~~~~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~-~lv~~~--~~~~v~~~d~~- 154 (276)
T 3no2_A 80 QTARILPDGNALVAWCGHPSTILEVNM-KGEVLSKTEFETGIERPHAQFRQINKNKKGN-YLVPLF--ATSEVREIAPN- 154 (276)
T ss_dssp EEEEECTTSCEEEEEESTTEEEEEECT-TSCEEEEEEECCSCSSGGGSCSCCEECTTSC-EEEEET--TTTEEEEECTT-
T ss_pred cccEECCCCCEEEEecCCCCEEEEEeC-CCCEEEEEeccCCCCcccccccCceECCCCC-EEEEec--CCCEEEEECCC-
Confidence 89999999999999887 788888886 7777776641 222445667889987 556655 69999999998
Q ss_pred CcEEEEeeCCCCEEEEEECCCCCeEEEEEecCCCcEEEEECCCCcc
Q 014934 368 NTHLSCMDTGSQVCNLVWSKNVNELVSTHGYSQNQIIVWRYPTMSK 413 (415)
Q Consensus 368 ~~~~~~~~~~~~V~~l~~s~~~~~l~s~~g~~dg~I~vw~~~s~~~ 413 (415)
|+.+..+.....+.++...++|+.+++ +..++.|..+|..+++.
T Consensus 155 G~~~w~~~~~~~~~~~~~~~~g~~~v~--~~~~~~v~~~d~~tG~~ 198 (276)
T 3no2_A 155 GQLLNSVKLSGTPFSSAFLDNGDCLVA--CGDAHCFVQLNLESNRI 198 (276)
T ss_dssp SCEEEEEECSSCCCEEEECTTSCEEEE--CBTTSEEEEECTTTCCE
T ss_pred CCEEEEEECCCCccceeEcCCCCEEEE--eCCCCeEEEEeCcCCcE
Confidence 999999987777778889999999988 66677899999877664
No 202
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.44 E-value=2.4e-11 Score=113.32 Aligned_cols=191 Identities=8% Similarity=-0.026 Sum_probs=140.1
Q ss_pred CCCCeEEEEEcCCCC-eEEEEECCCcEEEEECCCCeeeEEecCCCccEEEEEee--CCEEEEEeCCCcEEEEECCCCCcc
Q 014934 207 IDDSVCSVGWANRNT-HLAVGTSHGKVQIWDASRCKRVRTMEGHRLRVGALAWS--SSLLSSGSRDKSILQRDIRAQEDF 283 (415)
Q Consensus 207 ~~~~V~~v~~sp~g~-~la~g~~dg~V~iwd~~~~~~~~~l~~h~~~V~~l~~~--~~~l~sgs~dg~I~iwd~~~~~~~ 283 (415)
+.....+++|+|+|+ +++++..++.|..||..++ ...+..+...+.+++++ +.++++...++.|.+||..++. .
T Consensus 26 ~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~~l~~~~dg~l~v~~~~~~~i~~~d~~~g~-~ 102 (296)
T 3e5z_A 26 GFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ--LSPEMHPSHHQNGHCLNKQGHLIACSHGLRRLERQREPGGE-W 102 (296)
T ss_dssp CCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC--EEEEESSCSSEEEEEECTTCCEEEEETTTTEEEEECSTTCC-E
T ss_pred CCccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC--eEEEECCCCCcceeeECCCCcEEEEecCCCeEEEEcCCCCc-E
Confidence 446788999999998 7888888999999999877 56666677889999998 4566666667899999997765 2
Q ss_pred EEEecc----ccCCeEEEEEeCCCCEEEEE----e-------------CCCcEEEEECCCCceeEEeccCCCcEEEEEEc
Q 014934 284 VSKLSG----HKSEVCGLKWSYDNRELASG----G-------------NDNRLFVWNQHSTQPVLKYCEHTAAVKAIAWS 342 (415)
Q Consensus 284 ~~~~~~----h~~~V~~l~~spdg~~lasg----~-------------~dg~I~iwd~~~~~~~~~~~~h~~~V~~l~~s 342 (415)
...... ....+..++++|+|+++++. . ..+.|..+|.. ++ +..+..+......++|+
T Consensus 103 ~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~-~~~~~~~~~~~~gi~~s 180 (296)
T 3e5z_A 103 ESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GT-LSAPIRDRVKPNGLAFL 180 (296)
T ss_dssp EEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SC-EEEEECCCSSEEEEEEC
T ss_pred EEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CC-EEEeecCCCCCccEEEC
Confidence 222221 12346789999999998873 3 13467777765 44 34455667778999999
Q ss_pred CCCCcEEEEEcCCCCCeEEEEECC-CCcE---EEEee-CCCCEEEEEECCCCCeEEEEEecCCCcEEEEECC
Q 014934 343 PHLHGLLASGGGTADRCIRFWNTT-TNTH---LSCMD-TGSQVCNLVWSKNVNELVSTHGYSQNQIIVWRYP 409 (415)
Q Consensus 343 p~~~~llasggg~~d~~I~iwd~~-t~~~---~~~~~-~~~~V~~l~~s~~~~~l~s~~g~~dg~I~vw~~~ 409 (415)
|+++.+ ++.. .++.|.+|++. +++. ...+. ....+.+++++++|+.+++ . ++.|.+|+..
T Consensus 181 ~dg~~l-v~~~--~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~--~--~~~v~~~~~~ 245 (296)
T 3e5z_A 181 PSGNLL-VSDT--GDNATHRYCLNARGETEYQGVHFTVEPGKTDGLRVDAGGLIWAS--A--GDGVHVLTPD 245 (296)
T ss_dssp TTSCEE-EEET--TTTEEEEEEECSSSCEEEEEEEECCSSSCCCSEEEBTTSCEEEE--E--TTEEEEECTT
T ss_pred CCCCEE-EEeC--CCCeEEEEEECCCCcCcCCCeEeeCCCCCCCeEEECCCCCEEEE--c--CCeEEEECCC
Confidence 999866 6665 68899999987 5554 22221 2345678999999987766 3 6789999975
No 203
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.44 E-value=1e-10 Score=114.93 Aligned_cols=231 Identities=13% Similarity=0.075 Sum_probs=160.9
Q ss_pred ceeEeecCC-CcEEEEEc-CCeEEEEECCCCCeEEeEecCCCCCeEEEEEcCCCCeEEEEECCC--cEEEEECCCCeeeE
Q 014934 169 YLNLVDWSS-HNVLAVGL-GNCVYLWNACSSKVTKLCDLGIDDSVCSVGWANRNTHLAVGTSHG--KVQIWDASRCKRVR 244 (415)
Q Consensus 169 ~i~~l~ws~-~~~la~~~-d~~V~iwd~~~~~~~~~~~~~~~~~V~~v~~sp~g~~la~g~~dg--~V~iwd~~~~~~~~ 244 (415)
....|+|++ ++++++.. ++.|++||..++.+..+... ..... ++|+++++.|+++..++ .|.+|+...+....
T Consensus 132 ~P~~la~d~~g~lyv~d~~~~~I~~id~~~g~~~~~~~~--~~~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~~~ 208 (409)
T 3hrp_A 132 YMWGIAAVGNNTVLAYQRDDPRVRLISVDDNKVTTVHPG--FKGGK-PAVTKDKQRVYSIGWEGTHTVYVYMKASGWAPT 208 (409)
T ss_dssp CEEEEEECSTTEEEEEETTTTEEEEEETTTTEEEEEEET--CCBCB-CEECTTSSEEEEEBSSTTCEEEEEEGGGTTCEE
T ss_pred CceEEEEeCCCCEEEEecCCCcEEEEECCCCEEEEeecc--CCCCc-eeEecCCCcEEEEecCCCceEEEEEcCCCceeE
Confidence 467889988 66666654 47999999998887776653 22334 99999999999888766 78888887654433
Q ss_pred Ee----cCCCccEEEEEeeC--CEEEEEeCCCcEEEEECCCCCccEEE---eccccCCe--EEEEEeCC-CCEEEEEeCC
Q 014934 245 TM----EGHRLRVGALAWSS--SLLSSGSRDKSILQRDIRAQEDFVSK---LSGHKSEV--CGLKWSYD-NRELASGGND 312 (415)
Q Consensus 245 ~l----~~h~~~V~~l~~~~--~~l~sgs~dg~I~iwd~~~~~~~~~~---~~~h~~~V--~~l~~spd-g~~lasg~~d 312 (415)
.+ ......+.++++++ ..|+.+..++.|+.||.......... ..++...- ..++|+|+ +.++++-..+
T Consensus 209 ~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~~ 288 (409)
T 3hrp_A 209 RIGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQNL 288 (409)
T ss_dssp EEEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEETTT
T ss_pred EeeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEEEeCCC
Confidence 33 22445677888874 56666778889999999876521110 12222222 39999995 6666666778
Q ss_pred CcEEEEECCCCceeEEeccCC---------------CcEEEEEEcCCCCcEEEEEcCCCCCeEEEEECCCCcEEEEeeC-
Q 014934 313 NRLFVWNQHSTQPVLKYCEHT---------------AAVKAIAWSPHLHGLLASGGGTADRCIRFWNTTTNTHLSCMDT- 376 (415)
Q Consensus 313 g~I~iwd~~~~~~~~~~~~h~---------------~~V~~l~~sp~~~~llasggg~~d~~I~iwd~~t~~~~~~~~~- 376 (415)
+.|+.||.... +..+.++. .....++++|+|. ++++.. ..++.|+.|++.+|.......+
T Consensus 289 ~~I~~~~~~g~--~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~-lyvad~-~~~~~I~~~~~~~G~v~~~~g~~ 364 (409)
T 3hrp_A 289 SSVYKITPDGE--CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGN-FYIVDG-FKGYCLRKLDILDGYVSTVAGQV 364 (409)
T ss_dssp TEEEEECTTCC--EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCC-EEEEET-TTTCEEEEEETTTTEEEEEEECT
T ss_pred CEEEEEecCCC--EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCC-EEEEeC-CCCCEEEEEECCCCEEEEEeCCC
Confidence 89999997644 33333332 3478999999998 766642 0378999999888875444333
Q ss_pred --------------CCCEEEEEECCCCCeEEEEEecCCCcEEEEEC
Q 014934 377 --------------GSQVCNLVWSKNVNELVSTHGYSQNQIIVWRY 408 (415)
Q Consensus 377 --------------~~~V~~l~~s~~~~~l~s~~g~~dg~I~vw~~ 408 (415)
-.....+++++++..+++ ...++.|+.+++
T Consensus 365 ~~~g~~~g~~~~~~~~~P~giavd~~g~lyVa--d~~n~~Ir~i~~ 408 (409)
T 3hrp_A 365 DVASQIDGTPLEATFNYPYDICYDGEGGYWIA--EAWGKAIRKYAV 408 (409)
T ss_dssp TCBSCCCBSTTTCCBSSEEEEEECSSSEEEEE--ESTTCEEEEEEE
T ss_pred CCCCcCCCChhceEeCCceEEEEcCCCCEEEE--ECCCCeEEEEEe
Confidence 145889999999877776 667788888765
No 204
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.41 E-value=1.6e-11 Score=128.72 Aligned_cols=214 Identities=8% Similarity=-0.025 Sum_probs=145.6
Q ss_pred eEEEEECCCCCeEEeEec-----CCCCCeEEEEEcCCCCeEEEEE-----CCCcEEEEECCCCeeeEEecCCCccE--EE
Q 014934 188 CVYLWNACSSKVTKLCDL-----GIDDSVCSVGWANRNTHLAVGT-----SHGKVQIWDASRCKRVRTMEGHRLRV--GA 255 (415)
Q Consensus 188 ~V~iwd~~~~~~~~~~~~-----~~~~~V~~v~~sp~g~~la~g~-----~dg~V~iwd~~~~~~~~~l~~h~~~V--~~ 255 (415)
.|++.+...++...++.. +|...+.+++|||||++||.+. .+..|++||+.+++.+. ..+...+ ..
T Consensus 95 ~l~~~~~~~~~~~~l~d~~~~a~~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~--~~~~~~~~~~~ 172 (695)
T 2bkl_A 95 ILYWRQGESGQEKVLLDPNGWSKDGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSK--VDVIEGGKYAT 172 (695)
T ss_dssp EEEEEESTTSCCEEEECGGGSSSSSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCS--SCCBSCCTTCC
T ss_pred EEEEEcCCCCCcEEEEchHHhccCCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcC--CcccCcccccc
Confidence 456666666665555432 2344689999999999999543 34579999999987641 1122222 67
Q ss_pred EEee--CCEEEEEeCCCc-------------EEEEECCCCCc---cEEEeccccCCeEEEEEeCCCCEEEEEeCCC----
Q 014934 256 LAWS--SSLLSSGSRDKS-------------ILQRDIRAQED---FVSKLSGHKSEVCGLKWSYDNRELASGGNDN---- 313 (415)
Q Consensus 256 l~~~--~~~l~sgs~dg~-------------I~iwd~~~~~~---~~~~~~~h~~~V~~l~~spdg~~lasg~~dg---- 313 (415)
++|+ ++.|+.++.|.. |++|++.++.. .+.....|...+.++.|+|||++|+.++.++
T Consensus 173 ~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~ 252 (695)
T 2bkl_A 173 PKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSEN 252 (695)
T ss_dssp CEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTEE
T ss_pred eEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCce
Confidence 8998 468888888776 99999987752 2223334556789999999999998877666
Q ss_pred cEEEEECCCCceeEEeccCCCcEEEEEEcCCCCcEEEEEc-CCCCCeEEEEECCCCcE---EEEeeC--CCCEEEEEECC
Q 014934 314 RLFVWNQHSTQPVLKYCEHTAAVKAIAWSPHLHGLLASGG-GTADRCIRFWNTTTNTH---LSCMDT--GSQVCNLVWSK 387 (415)
Q Consensus 314 ~I~iwd~~~~~~~~~~~~h~~~V~~l~~sp~~~~llasgg-g~~d~~I~iwd~~t~~~---~~~~~~--~~~V~~l~~s~ 387 (415)
.|++||..+++ ...+..+...+....| +++. +++.+. +..++.|.+||+.+++. ...+.+ ...+..+.|+
T Consensus 253 ~l~~~~~~~~~-~~~l~~~~~~~~~~~~-~~g~-l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~- 328 (695)
T 2bkl_A 253 DVYWKRPGEKD-FRLLVKGVGAKYEVHA-WKDR-FYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSSASLLSVSIV- 328 (695)
T ss_dssp EEEEECTTCSS-CEEEEECSSCCEEEEE-ETTE-EEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSSCEEEEEEEE-
T ss_pred EEEEEcCCCCc-eEEeecCCCceEEEEe-cCCc-EEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCCCCeEEEEEEE-
Confidence 78888776554 4455566666677777 6666 666653 11368899999988753 333333 3457888888
Q ss_pred CCCeEEEEEecCCCcEEEEECC
Q 014934 388 NVNELVSTHGYSQNQIIVWRYP 409 (415)
Q Consensus 388 ~~~~l~s~~g~~dg~I~vw~~~ 409 (415)
++..+++ ...|+..+||.+.
T Consensus 329 ~~~lv~~--~~~dg~~~l~~~~ 348 (695)
T 2bkl_A 329 GGHLSLE--YLKDATSEVRVAT 348 (695)
T ss_dssp TTEEEEE--EEETTEEEEEEEE
T ss_pred CCEEEEE--EEECCEEEEEEEe
Confidence 5555555 5678887777654
No 205
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.40 E-value=9e-10 Score=104.55 Aligned_cols=215 Identities=12% Similarity=0.037 Sum_probs=146.2
Q ss_pred ceeEeecCC--CcEEEEE-cCCeEEEEECCCCCeEEeEecCCCCCeEEEEEcCCCCeEEEEECCCcEEEEECCCCeeeEE
Q 014934 169 YLNLVDWSS--HNVLAVG-LGNCVYLWNACSSKVTKLCDLGIDDSVCSVGWANRNTHLAVGTSHGKVQIWDASRCKRVRT 245 (415)
Q Consensus 169 ~i~~l~ws~--~~~la~~-~d~~V~iwd~~~~~~~~~~~~~~~~~V~~v~~sp~g~~la~g~~dg~V~iwd~~~~~~~~~ 245 (415)
......|++ +.++.++ .++.|+.|+..+++... +. ....+.++.|+++|+++++ +.+| |.+||..+++....
T Consensus 50 ~~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~~~-~~--~~~~v~~i~~~~dg~l~v~-~~~g-l~~~d~~~g~~~~~ 124 (326)
T 2ghs_A 50 LGEGPTFDPASGTAWWFNILERELHELHLASGRKTV-HA--LPFMGSALAKISDSKQLIA-SDDG-LFLRDTATGVLTLH 124 (326)
T ss_dssp BEEEEEEETTTTEEEEEEGGGTEEEEEETTTTEEEE-EE--CSSCEEEEEEEETTEEEEE-ETTE-EEEEETTTCCEEEE
T ss_pred CCcCCeEeCCCCEEEEEECCCCEEEEEECCCCcEEE-EE--CCCcceEEEEeCCCeEEEE-ECCC-EEEEECCCCcEEEE
Confidence 356788998 4556666 46899999998876543 33 2467999999999987665 4444 99999988765433
Q ss_pred ecC----CCccEEEEEee--CCEEEEEeC------CCcEEEEECCCCCccEEEeccccCCeEEEEEeCCCCEEEEE-eCC
Q 014934 246 MEG----HRLRVGALAWS--SSLLSSGSR------DKSILQRDIRAQEDFVSKLSGHKSEVCGLKWSYDNRELASG-GND 312 (415)
Q Consensus 246 l~~----h~~~V~~l~~~--~~~l~sgs~------dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~spdg~~lasg-~~d 312 (415)
... ....+.+++++ ++++++... .+.|+.+| .+. ...+..+.....+++|+||++.|+.+ ..+
T Consensus 125 ~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~--~~~~~~~~~~~~~i~~s~dg~~lyv~~~~~ 200 (326)
T 2ghs_A 125 AELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGK--VTKLFADISIPNSICFSPDGTTGYFVDTKV 200 (326)
T ss_dssp ECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTE--EEEEEEEESSEEEEEECTTSCEEEEEETTT
T ss_pred eeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCc--EEEeeCCCcccCCeEEcCCCCEEEEEECCC
Confidence 221 12468899998 355444332 24566666 332 33333344567899999999877554 457
Q ss_pred CcEEEEECC--CC-c-----eeEEeccCCCcEEEEEEcCCCCcEEEEEcCCCCCeEEEEECCCCcEEEEeeCC-CCEEEE
Q 014934 313 NRLFVWNQH--ST-Q-----PVLKYCEHTAAVKAIAWSPHLHGLLASGGGTADRCIRFWNTTTNTHLSCMDTG-SQVCNL 383 (415)
Q Consensus 313 g~I~iwd~~--~~-~-----~~~~~~~h~~~V~~l~~sp~~~~llasggg~~d~~I~iwd~~t~~~~~~~~~~-~~V~~l 383 (415)
+.|.+||+. ++ . .+..+......+..+++.++|. ++++.. .++.|..||. +++.+..+... ..+.++
T Consensus 201 ~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~-lwva~~--~~~~v~~~d~-~g~~~~~i~~~~~~~~~~ 276 (326)
T 2ghs_A 201 NRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGH-IWNARW--GEGAVDRYDT-DGNHIARYEVPGKQTTCP 276 (326)
T ss_dssp CEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSC-EEEEEE--TTTEEEEECT-TCCEEEEEECSCSBEEEE
T ss_pred CEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCC-EEEEEe--CCCEEEEECC-CCCEEEEEECCCCCcEEE
Confidence 899999985 55 3 1223333455678899999987 555543 3678999998 67777777644 469999
Q ss_pred EEC-CCCCeEEEEE
Q 014934 384 VWS-KNVNELVSTH 396 (415)
Q Consensus 384 ~~s-~~~~~l~s~~ 396 (415)
+|+ ++++.|+++.
T Consensus 277 af~g~d~~~L~vt~ 290 (326)
T 2ghs_A 277 AFIGPDASRLLVTS 290 (326)
T ss_dssp EEESTTSCEEEEEE
T ss_pred EEecCCCCEEEEEe
Confidence 998 8888876653
No 206
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.39 E-value=3.5e-11 Score=118.08 Aligned_cols=239 Identities=11% Similarity=0.053 Sum_probs=169.4
Q ss_pred EeecCC-CcEEEEEc-----------CCeEEEEECCCCCeEEeEecC-C-----CCCeEEEEEcCCCCeEEEEEC--CCc
Q 014934 172 LVDWSS-HNVLAVGL-----------GNCVYLWNACSSKVTKLCDLG-I-----DDSVCSVGWANRNTHLAVGTS--HGK 231 (415)
Q Consensus 172 ~l~ws~-~~~la~~~-----------d~~V~iwd~~~~~~~~~~~~~-~-----~~~V~~v~~sp~g~~la~g~~--dg~ 231 (415)
.+.++| ++.|.++. ++.|.++|..+.+....+.++ . ......+.++|||++|.++.. ++.
T Consensus 122 gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~ 201 (426)
T 3c75_H 122 HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPA 201 (426)
T ss_dssp EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCE
T ss_pred ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCe
Confidence 577888 55555553 468999999999988877654 1 234567899999999999874 578
Q ss_pred EEEEECCCCeeeEEecCCCccEEEEEe-eCCEEEEEeCCCcEEEEECCCCCccEEE----eccccCCe-EEEEEeCCCCE
Q 014934 232 VQIWDASRCKRVRTMEGHRLRVGALAW-SSSLLSSGSRDKSILQRDIRAQEDFVSK----LSGHKSEV-CGLKWSYDNRE 305 (415)
Q Consensus 232 V~iwd~~~~~~~~~l~~h~~~V~~l~~-~~~~l~sgs~dg~I~iwd~~~~~~~~~~----~~~h~~~V-~~l~~spdg~~ 305 (415)
|.+.|+.+.+.+..+.-.. . ..+.. ....+++.+.||.+.+.+...+. .... +.....++ ..+.+.+++..
T Consensus 202 VsVID~~t~kvv~~I~v~g-~-~~~~p~g~~~~v~~~~dG~~~~V~~~~~~-v~~~~~~~~~v~~~p~~~~~~~~~dg~~ 278 (426)
T 3c75_H 202 VGVVDLEGKTFDRMLDVPD-C-YHIFPASPTVFYMNCRDGSLARVDFADGE-TKVTNTEVFHTEDELLINHPAFSLRSGR 278 (426)
T ss_dssp EEEEETTTTEEEEEEECCS-E-EEEEEEETTEEEEEETTSSEEEEECCTTC-CEEEECCCCSCTTSCBCSCCEECTTTCE
T ss_pred EEEEECCCCeEEEEEEcCC-c-eeeccCCCcEEEEEcCCCCEEEEECCCCc-EEEEeeeeeccCCCceeeEeeecCCCCE
Confidence 9999999999988876422 1 12222 24677788899999999995443 2321 11111121 23567899998
Q ss_pred EEEEeCCCcEEEEECCCCceeE--Eecc----------CCCcEEEEEEcCCCCcEEEEEcCC-------CCCeEEEEECC
Q 014934 306 LASGGNDNRLFVWNQHSTQPVL--KYCE----------HTAAVKAIAWSPHLHGLLASGGGT-------ADRCIRFWNTT 366 (415)
Q Consensus 306 lasg~~dg~I~iwd~~~~~~~~--~~~~----------h~~~V~~l~~sp~~~~llasggg~-------~d~~I~iwd~~ 366 (415)
++.....+.|.+.|........ .+.- .......++++|+++.++++.... ..+.|.++|+.
T Consensus 279 ~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~ 358 (426)
T 3c75_H 279 LVWPTYTGKIFQADLTAEGATFRAPIEALTEAERADDWRPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAE 358 (426)
T ss_dssp EEEEBTTSEEEEEEECSSCEEECCCEESSCTTTGGGTEEECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETT
T ss_pred EEEEeCCCcEEEEeccCCceEEeeeeeeccccccccccccCCceeeEEcCCCCEEEEEecccccccccCCCCEEEEEECC
Confidence 8888888999999987553211 1110 011122378999998888875210 13579999999
Q ss_pred CCcEEEEeeCCCCEEEEEECCCCC-eEEEEEecCCCcEEEEECCCCccc
Q 014934 367 TNTHLSCMDTGSQVCNLVWSKNVN-ELVSTHGYSQNQIIVWRYPTMSKV 414 (415)
Q Consensus 367 t~~~~~~~~~~~~V~~l~~s~~~~-~l~s~~g~~dg~I~vw~~~s~~~l 414 (415)
+++.+..+..+....++.|+++|+ .++++ ...++.|.|+|..+++.+
T Consensus 359 T~kvv~~I~vg~~P~gia~spDg~~~lyv~-n~~s~~VsVID~~t~kvv 406 (426)
T 3c75_H 359 TGERINKIELGHEIDSINVSQDAEPLLYAL-SAGTQTLHIYDAATGEEL 406 (426)
T ss_dssp TCCEEEEEEEEEEECEEEECCSSSCEEEEE-ETTTTEEEEEETTTCCEE
T ss_pred CCeEEEEEECCCCcCeEEEccCCCEEEEEE-cCCCCeEEEEECCCCCEE
Confidence 999999998877899999999999 77775 446899999999988753
No 207
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.38 E-value=4.3e-11 Score=109.57 Aligned_cols=197 Identities=10% Similarity=0.009 Sum_probs=140.3
Q ss_pred ceeEeecCC-CcEEEEEcCCeEEEEECCCCCeEEeEecCCCCCeEEEEEcCCCCeEEEEECCCcEEEEECCCCeeeEEec
Q 014934 169 YLNLVDWSS-HNVLAVGLGNCVYLWNACSSKVTKLCDLGIDDSVCSVGWANRNTHLAVGTSHGKVQIWDASRCKRVRTME 247 (415)
Q Consensus 169 ~i~~l~ws~-~~~la~~~d~~V~iwd~~~~~~~~~~~~~~~~~V~~v~~sp~g~~la~g~~dg~V~iwd~~~~~~~~~l~ 247 (415)
.+..+++++ ++++++..++.|++|+..+...... .......+.++++.++|+++++...++.|.+|+..+........
T Consensus 68 ~p~~i~~~~~g~l~v~~~~~~i~~~d~~~~~~~~~-~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~ 146 (270)
T 1rwi_B 68 QPQGLAVDGAGTVYVTDFNNRVVTLAAGSNNQTVL-PFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPF 146 (270)
T ss_dssp SCCCEEECTTCCEEEEETTTEEEEECTTCSCCEEC-CCCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCEECCC
T ss_pred CcceeEECCCCCEEEEcCCCEEEEEeCCCceEeee-ecCCcCCCcceEECCCCCEEEEECCCCEEEEEECCCceeEeecc
Confidence 355778887 5666665678999999877654332 22333678999999999977776778899999876554333222
Q ss_pred CCCccEEEEEee--CCEEEEEeCCCcEEEEECCCCCccEEEeccccCCeEEEEEeCCCCEEEEEeCCCcEEEEECCCCce
Q 014934 248 GHRLRVGALAWS--SSLLSSGSRDKSILQRDIRAQEDFVSKLSGHKSEVCGLKWSYDNRELASGGNDNRLFVWNQHSTQP 325 (415)
Q Consensus 248 ~h~~~V~~l~~~--~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~spdg~~lasg~~dg~I~iwd~~~~~~ 325 (415)
.....+.+++++ ++++++...++.|.+||...... ......+...+.+++++++|.++++...++.|.+||......
T Consensus 147 ~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~-~~~~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~ 225 (270)
T 1rwi_B 147 TGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQ-VVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTS 225 (270)
T ss_dssp CSCCSCCCEEECTTCCEEEEEGGGTEEEEECTTTCCE-EECCCSSCCSEEEEEECTTCCEEEEETTTSCEEEECTTCSCC
T ss_pred ccCCCceeEEEeCCCCEEEEECCCCEEEEEecCCCce-EeecccCCCCceEEEECCCCCEEEEECCCCcEEEEcCCCCcc
Confidence 333456778887 46666666678999999876652 222233336789999999998888887889999999876544
Q ss_pred eEEeccCCCcEEEEEEcCCCCcEEEEEcCCCCCeEEEEECCCCcE
Q 014934 326 VLKYCEHTAAVKAIAWSPHLHGLLASGGGTADRCIRFWNTTTNTH 370 (415)
Q Consensus 326 ~~~~~~h~~~V~~l~~sp~~~~llasggg~~d~~I~iwd~~t~~~ 370 (415)
......+...+.+++++++|. ++++.. .++.|+++++...+.
T Consensus 226 ~~~~~~~~~~p~~i~~~~~g~-l~v~~~--~~~~v~~~~~~~~~~ 267 (270)
T 1rwi_B 226 TVLPFTGLNTPLAVAVDSDRT-VYVADR--GNDRVVKLTSLEHHH 267 (270)
T ss_dssp EECCCCSCSCEEEEEECTTCC-EEEEEG--GGTEEEEECCCGGGS
T ss_pred eeeccCCCCCceeEEECCCCC-EEEEEC--CCCEEEEEcCCCccc
Confidence 332223446789999999986 777776 689999999876543
No 208
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.38 E-value=2e-09 Score=99.49 Aligned_cols=228 Identities=9% Similarity=-0.068 Sum_probs=157.7
Q ss_pred ceeEeecCC-CcEEEEEc-CCeEEEEECCCCCeEEeEecCCCCCeEEEEEcCCCCeEEEEECCCcEEEEECCCCeeeEE-
Q 014934 169 YLNLVDWSS-HNVLAVGL-GNCVYLWNACSSKVTKLCDLGIDDSVCSVGWANRNTHLAVGTSHGKVQIWDASRCKRVRT- 245 (415)
Q Consensus 169 ~i~~l~ws~-~~~la~~~-d~~V~iwd~~~~~~~~~~~~~~~~~V~~v~~sp~g~~la~g~~dg~V~iwd~~~~~~~~~- 245 (415)
.+..+.+.+ +++.++.. ++.|+.||.. ++............+.++++.++|+++++...++.|..||.. ++....
T Consensus 63 ~~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~ 140 (300)
T 2qc5_A 63 KVMCLIVSSLGDIWFTENGANKIGKLSKK-GGFTEYPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIYEYD 140 (300)
T ss_dssp CEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEEEEE
T ss_pred cceeEEECCCCCEEEEecCCCeEEEECCC-CCeEEecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCC-CCEEEcc
Confidence 467788888 66666654 5789999987 666433321234679999999999877776668899999987 554422
Q ss_pred ecCCCccEEEEEee--CCEEEEEeCCCcEEEEECCCCCccEEEeccccCCeEEEEEeCCCCEEEEEeCCCcEEEEECCCC
Q 014934 246 MEGHRLRVGALAWS--SSLLSSGSRDKSILQRDIRAQEDFVSKLSGHKSEVCGLKWSYDNRELASGGNDNRLFVWNQHST 323 (415)
Q Consensus 246 l~~h~~~V~~l~~~--~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~spdg~~lasg~~dg~I~iwd~~~~ 323 (415)
+......+.++++. ++++++...++.|..+|. .+.........+...+.+++++++|+++++....+.|.+||. ++
T Consensus 141 ~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g 218 (300)
T 2qc5_A 141 LPNKGSYPAFITLGSDNALWFTENQNNSIGRITN-TGKLEEYPLPTNAAAPVGITSGNDGALWFVEIMGNKIGRITT-TG 218 (300)
T ss_dssp CSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TC
T ss_pred CCCCCCCceeEEECCCCCEEEEecCCCeEEEECC-CCcEEEeeCCCCCCCcceEEECCCCCEEEEccCCCEEEEEcC-CC
Confidence 33345678889887 455555555788999998 443222222234457899999999988877777788999998 55
Q ss_pred ceeEE-eccCCCcEEEEEEcCCCCcEEEEEcCCCCCeEEEEECCCCcEEEE-ee-CCCCEEEEEECCCCCeEEEEEecCC
Q 014934 324 QPVLK-YCEHTAAVKAIAWSPHLHGLLASGGGTADRCIRFWNTTTNTHLSC-MD-TGSQVCNLVWSKNVNELVSTHGYSQ 400 (415)
Q Consensus 324 ~~~~~-~~~h~~~V~~l~~sp~~~~llasggg~~d~~I~iwd~~t~~~~~~-~~-~~~~V~~l~~s~~~~~l~s~~g~~d 400 (415)
+.... +..+...+.++++.+++. ++++.. .++.|..||. +++.... +. ....+.+++++++|+.+++ .. .
T Consensus 219 ~~~~~~~~~~~~~~~~i~~d~~g~-l~v~~~--~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~--~~-~ 291 (300)
T 2qc5_A 219 EISEYDIPTPNARPHAITAGKNSE-IWFTEW--GANQIGRITN-DNTIQEYQLQTENAEPHGITFGKDGSVWFA--LK-C 291 (300)
T ss_dssp CEEEEECSSTTCCEEEEEECSTTC-EEEEET--TTTEEEEECT-TSCEEEEECCSTTCCCCCEEECTTSCEEEE--CS-S
T ss_pred cEEEEECCCCCCCceEEEECCCCC-EEEecc--CCCeEEEECC-CCcEEEEECCccCCccceeEeCCCCCEEEE--cc-C
Confidence 44332 334556789999999987 777654 4789999998 4544322 22 2456888999999986665 33 3
Q ss_pred CcEEEEEC
Q 014934 401 NQIIVWRY 408 (415)
Q Consensus 401 g~I~vw~~ 408 (415)
.|..++.
T Consensus 292 -~i~~~~p 298 (300)
T 2qc5_A 292 -KIGKLNL 298 (300)
T ss_dssp -EEEEEEE
T ss_pred -ceEEeCC
Confidence 6766664
No 209
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.35 E-value=1.6e-10 Score=121.23 Aligned_cols=248 Identities=13% Similarity=0.078 Sum_probs=165.9
Q ss_pred ceeccCCCCCC--CcceeEeecCC-CcEEEEEcC------CeEEEEECCCCCeEEeEecCCCCCeEEEEEcCCCCeEEEE
Q 014934 156 YKILDAPALQD--DFYLNLVDWSS-HNVLAVGLG------NCVYLWNACSSKVTKLCDLGIDDSVCSVGWANRNTHLAVG 226 (415)
Q Consensus 156 ~~~ld~~~l~~--~~~i~~l~ws~-~~~la~~~d------~~V~iwd~~~~~~~~~~~~~~~~~V~~v~~sp~g~~la~g 226 (415)
..+||...+.. .+.+..+.||| ++.||.+.+ ..|++||+.+++...... . .....+++|+ ||+.|+.+
T Consensus 115 ~vllD~n~la~~~~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~~-~-~~k~~~~~Ws-Dg~~l~y~ 191 (693)
T 3iuj_A 115 EVFLDPNTLSPDGTTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLETPL-K-DVKFSGISWL-GNEGFFYS 191 (693)
T ss_dssp EEEECGGGGSTTSCCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEEEE-E-EEESCCCEEE-TTTEEEEE
T ss_pred EEEEehhhccCCCcEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCcccc-C-CceeccEEEe-CCCEEEEE
Confidence 44555543332 34688889999 788887632 369999999998755432 1 1113578999 99999999
Q ss_pred ECCCc-------------EEEEECCCCee--eEEec--C-CCccEEEEEee--CCEEEE-EeC---CCcEEEEECCCCCc
Q 014934 227 TSHGK-------------VQIWDASRCKR--VRTME--G-HRLRVGALAWS--SSLLSS-GSR---DKSILQRDIRAQED 282 (415)
Q Consensus 227 ~~dg~-------------V~iwd~~~~~~--~~~l~--~-h~~~V~~l~~~--~~~l~s-gs~---dg~I~iwd~~~~~~ 282 (415)
+.+.. |.+|++.+... ...+. . |...+..+.|+ +++|+. .+. ++.|+++|+..+..
T Consensus 192 ~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~ 271 (693)
T 3iuj_A 192 SYDKPDGSELSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENA 271 (693)
T ss_dssp ESSCCC-------CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTC
T ss_pred EecCcccccccccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCC
Confidence 88743 99999977542 23333 3 44557788888 455543 332 35899999987643
Q ss_pred cEEEeccccCCeEEEEEeCCCCEEEEEeC-C---CcEEEEECCCCce--eEEeccCCCcEEEEEEcCCCCcEEEEEcCCC
Q 014934 283 FVSKLSGHKSEVCGLKWSYDNRELASGGN-D---NRLFVWNQHSTQP--VLKYCEHTAAVKAIAWSPHLHGLLASGGGTA 356 (415)
Q Consensus 283 ~~~~~~~h~~~V~~l~~spdg~~lasg~~-d---g~I~iwd~~~~~~--~~~~~~h~~~V~~l~~sp~~~~llasggg~~ 356 (415)
....+..+....... |+++|..|+..++ + +.|.++|+.++.. ...+..|...+. .|++++..|+++.. .
T Consensus 272 ~~~~l~~~~~~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~--~~s~~g~~lv~~~~--~ 346 (693)
T 3iuj_A 272 PLLTVQGDLDADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQVL--TVHSGSGYLFAEYM--V 346 (693)
T ss_dssp CCEEEECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCE--EEEEETTEEEEEEE--E
T ss_pred ceEEEeCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCCEE--EEEEECCEEEEEEE--E
Confidence 345556666555555 6677776655443 2 5799999988754 345666766665 89999987777664 4
Q ss_pred CC--eEEEEECCCCcEEEEee--CCCCEEEEEECCCCCeEEEEEec--CCCcEEEEECCCCc
Q 014934 357 DR--CIRFWNTTTNTHLSCMD--TGSQVCNLVWSKNVNELVSTHGY--SQNQIIVWRYPTMS 412 (415)
Q Consensus 357 d~--~I~iwd~~t~~~~~~~~--~~~~V~~l~~s~~~~~l~s~~g~--~dg~I~vw~~~s~~ 412 (415)
++ .|++||+..+ ....+. ....+..+.+++++..|+.+..+ .-+.|..||+.+.+
T Consensus 347 ~g~~~l~~~d~~g~-~~~~l~~p~~~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~~~g~ 407 (693)
T 3iuj_A 347 DATARVEQFDYEGK-RVREVALPGLGSVSGFNGKHDDPALYFGFENYAQPPTLYRFEPKSGA 407 (693)
T ss_dssp TTEEEEEEECTTSC-EEEEECCSSSSEEEECCCCTTCSCEEEEEECSSSCCEEEEECTTTCC
T ss_pred CCeeEEEEEECCCC-eeEEeecCCCceEEeeecCCCCCEEEEEecCCCCCCEEEEEECCCCe
Confidence 44 6899998854 445554 33457788889999888774322 12789999987654
No 210
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.31 E-value=6.8e-10 Score=104.18 Aligned_cols=223 Identities=11% Similarity=0.113 Sum_probs=148.6
Q ss_pred ceeEeecCC-Cc-EEEEE-cCCeEEEEECCCCCeEEeEecCCCCCeEEEEEcCCCCeEEEEECCCcEEEEECCCCeeeEE
Q 014934 169 YLNLVDWSS-HN-VLAVG-LGNCVYLWNACSSKVTKLCDLGIDDSVCSVGWANRNTHLAVGTSHGKVQIWDASRCKRVRT 245 (415)
Q Consensus 169 ~i~~l~ws~-~~-~la~~-~d~~V~iwd~~~~~~~~~~~~~~~~~V~~v~~sp~g~~la~g~~dg~V~iwd~~~~~~~~~ 245 (415)
......|++ ++ ++.++ .++.|+.|+. +++..... .+...+.+++++++|+++++...++.|.+|+.. ++....
T Consensus 46 ~~egp~~~~~g~~l~~~d~~~~~i~~~~~-~g~~~~~~--~~~~~~~gl~~d~dG~l~v~~~~~~~v~~~~~~-g~~~~~ 121 (305)
T 3dr2_A 46 WSEGPAWWEAQRTLVWSDLVGRRVLGWRE-DGTVDVLL--DATAFTNGNAVDAQQRLVHCEHGRRAITRSDAD-GQAHLL 121 (305)
T ss_dssp SEEEEEEEGGGTEEEEEETTTTEEEEEET-TSCEEEEE--ESCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEE
T ss_pred CccCCeEeCCCCEEEEEECCCCEEEEEeC-CCCEEEEe--CCCCccceeeECCCCCEEEEECCCCEEEEECCC-CCEEEE
Confidence 456789998 55 56666 4689999998 55543333 345678999999999966655556789999986 543222
Q ss_pred ec---CC-CccEEEEEee--CCEEEE----EeC-------------CCcEEEEECCCCCccEEEeccccCCeEEEEEeCC
Q 014934 246 ME---GH-RLRVGALAWS--SSLLSS----GSR-------------DKSILQRDIRAQEDFVSKLSGHKSEVCGLKWSYD 302 (415)
Q Consensus 246 l~---~h-~~~V~~l~~~--~~~l~s----gs~-------------dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~spd 302 (415)
.. +. ...+.+++++ +.++++ |.. .+.|+.+|..++. ... +. ......+++|+||
T Consensus 122 ~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~-~~~-~~-~~~~p~gl~~spd 198 (305)
T 3dr2_A 122 VGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSP-LQR-MA-DLDHPNGLAFSPD 198 (305)
T ss_dssp ECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCC-CEE-EE-EESSEEEEEECTT
T ss_pred EeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCc-EEE-Ee-cCCCCcceEEcCC
Confidence 21 11 1235567777 456664 332 2567788876554 222 22 4456789999999
Q ss_pred CCEEEEEeCC------CcEEEEECCCCceeE---Ee-ccCCCcEEEEEEcCCCCcEEEEEcCCCCCeEEEEECCCCcEEE
Q 014934 303 NRELASGGND------NRLFVWNQHSTQPVL---KY-CEHTAAVKAIAWSPHLHGLLASGGGTADRCIRFWNTTTNTHLS 372 (415)
Q Consensus 303 g~~lasg~~d------g~I~iwd~~~~~~~~---~~-~~h~~~V~~l~~sp~~~~llasggg~~d~~I~iwd~~t~~~~~ 372 (415)
++.|+.+... +.|.+||+..+. +. .+ .........+++.++|+ ++++. .+ .|.+||. .++.+.
T Consensus 199 g~~lyv~~~~~~~~~~~~i~~~~~~~~~-l~~~~~~~~~~~~~pdgi~~d~~G~-lwv~~---~~-gv~~~~~-~g~~~~ 271 (305)
T 3dr2_A 199 EQTLYVSQTPEQGHGSVEITAFAWRDGA-LHDRRHFASVPDGLPDGFCVDRGGW-LWSSS---GT-GVCVFDS-DGQLLG 271 (305)
T ss_dssp SSEEEEEECCC---CCCEEEEEEEETTE-EEEEEEEECCSSSCCCSEEECTTSC-EEECC---SS-EEEEECT-TSCEEE
T ss_pred CCEEEEEecCCcCCCCCEEEEEEecCCC-ccCCeEEEECCCCCCCeEEECCCCC-EEEec---CC-cEEEECC-CCCEEE
Confidence 9988877665 789999987553 21 11 11234456789999997 66644 23 4999998 678888
Q ss_pred EeeCCCCEEEEEECCCCCeEEEEEecCCCcEEEEEC
Q 014934 373 CMDTGSQVCNLVWSKNVNELVSTHGYSQNQIIVWRY 408 (415)
Q Consensus 373 ~~~~~~~V~~l~~s~~~~~l~s~~g~~dg~I~vw~~ 408 (415)
.+.....+.+++|+++++.|..+ .. +.|..+++
T Consensus 272 ~~~~~~~~~~~~f~~d~~~L~it--~~-~~l~~~~~ 304 (305)
T 3dr2_A 272 HIPTPGTASNCTFDQAQQRLFIT--GG-PCLWMLPL 304 (305)
T ss_dssp EEECSSCCCEEEECTTSCEEEEE--ET-TEEEEEEC
T ss_pred EEECCCceeEEEEeCCCCEEEEE--cC-CeEEEEEC
Confidence 88766678999999999888874 23 34554443
No 211
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.29 E-value=5.9e-10 Score=104.17 Aligned_cols=196 Identities=9% Similarity=0.067 Sum_probs=138.6
Q ss_pred CCCeEEEEEcCCCCeEEE-------EECCCcEEEEECCCCeeeEEec----CCCccEEEEEeeC--CEEEEEeCCCcEEE
Q 014934 208 DDSVCSVGWANRNTHLAV-------GTSHGKVQIWDASRCKRVRTME----GHRLRVGALAWSS--SLLSSGSRDKSILQ 274 (415)
Q Consensus 208 ~~~V~~v~~sp~g~~la~-------g~~dg~V~iwd~~~~~~~~~l~----~h~~~V~~l~~~~--~~l~sgs~dg~I~i 274 (415)
-....+++|+++|.++++ +..++.|.+||..+++...... ++...+.++++++ ..|+.++..+.|.+
T Consensus 17 ~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~~~~l~~ 96 (314)
T 1pjx_A 17 IPGAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADMRLGLLV 96 (314)
T ss_dssp CTTCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEETTTEEEE
T ss_pred CCCccCceECCCCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEEECCCCEEE
Confidence 346789999999987777 5778899999988776543222 2446788999974 46666666668999
Q ss_pred EECCCCCccEEEe-cc-----ccCCeEEEEEeCCCCEEEEEeCC---------------CcEEEEECCCCceeEEeccCC
Q 014934 275 RDIRAQEDFVSKL-SG-----HKSEVCGLKWSYDNRELASGGND---------------NRLFVWNQHSTQPVLKYCEHT 333 (415)
Q Consensus 275 wd~~~~~~~~~~~-~~-----h~~~V~~l~~spdg~~lasg~~d---------------g~I~iwd~~~~~~~~~~~~h~ 333 (415)
||.. +. ...+ .. ....+.+++++++|+++++...+ +.|..||.. ++... +..+.
T Consensus 97 ~d~~-g~--~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~-~~~~~ 171 (314)
T 1pjx_A 97 VQTD-GT--FEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQ-VDTAF 171 (314)
T ss_dssp EETT-SC--EEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEE-EEEEE
T ss_pred EeCC-CC--EEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEE-eccCC
Confidence 9988 44 2333 11 12458899999999988877655 578888876 54433 33444
Q ss_pred CcEEEEEEc----CCCCcEEEEEcCCCCCeEEEEECC-CCcE-----EEEeeCC--CCEEEEEECCCCCeEEEEEecCCC
Q 014934 334 AAVKAIAWS----PHLHGLLASGGGTADRCIRFWNTT-TNTH-----LSCMDTG--SQVCNLVWSKNVNELVSTHGYSQN 401 (415)
Q Consensus 334 ~~V~~l~~s----p~~~~llasggg~~d~~I~iwd~~-t~~~-----~~~~~~~--~~V~~l~~s~~~~~l~s~~g~~dg 401 (415)
.....++|+ |+++.++++.. .++.|.+||+. +++. +..+... ..+..++++++|+.+++ ...++
T Consensus 172 ~~~~~i~~~~~~d~dg~~l~v~~~--~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~--~~~~~ 247 (314)
T 1pjx_A 172 QFPNGIAVRHMNDGRPYQLIVAET--PTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVA--NWGSS 247 (314)
T ss_dssp SSEEEEEEEECTTSCEEEEEEEET--TTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEE--EETTT
T ss_pred CCcceEEEecccCCCCCEEEEEEC--CCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEEE--EcCCC
Confidence 567889999 99876777765 57899999986 4542 2222222 45788999999988877 44578
Q ss_pred cEEEEECCCCc
Q 014934 402 QIIVWRYPTMS 412 (415)
Q Consensus 402 ~I~vw~~~s~~ 412 (415)
.|.+|+..+++
T Consensus 248 ~i~~~d~~~g~ 258 (314)
T 1pjx_A 248 HIEVFGPDGGQ 258 (314)
T ss_dssp EEEEECTTCBS
T ss_pred EEEEEcCCCCc
Confidence 99999987543
No 212
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.29 E-value=3.9e-10 Score=119.15 Aligned_cols=217 Identities=12% Similarity=0.040 Sum_probs=138.4
Q ss_pred eEEEEECC---CCCeEEeEec-----CCCCCeEEEEEcCCCCeEEEEECC-----CcEEEEECCCCeeeEEecCCCccEE
Q 014934 188 CVYLWNAC---SSKVTKLCDL-----GIDDSVCSVGWANRNTHLAVGTSH-----GKVQIWDASRCKRVRTMEGHRLRVG 254 (415)
Q Consensus 188 ~V~iwd~~---~~~~~~~~~~-----~~~~~V~~v~~sp~g~~la~g~~d-----g~V~iwd~~~~~~~~~l~~h~~~V~ 254 (415)
.|++.+.. .++...++.. ++...+.+++|||||++||.+..+ ..|++||+.+++.+.... +...+.
T Consensus 134 ~l~~~~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~~~-~~~~~~ 212 (741)
T 1yr2_A 134 QLLVRPADAPVGTKGRVLLDPNTWAKDGATALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKPLADEL-KWVKFS 212 (741)
T ss_dssp EEEEEETTSCTTCCCEEEECGGGCC----EEEEEEEECTTSSEEEEEEEETTCSEEEEEEEETTTCCEEEEEE-EEEESC
T ss_pred EEEEEcCCccCCCCCEEEECHHHhccCCCEEEEeEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCCccC-CCceec
Confidence 35555554 4554444321 223368899999999999988654 359999999988754311 222235
Q ss_pred EEEeeC-CEEEEEeCCCc--------------EEEEECCCCCcc-EEEec--cccCCeEEEEEeCCCCEEEEEeCCC---
Q 014934 255 ALAWSS-SLLSSGSRDKS--------------ILQRDIRAQEDF-VSKLS--GHKSEVCGLKWSYDNRELASGGNDN--- 313 (415)
Q Consensus 255 ~l~~~~-~~l~sgs~dg~--------------I~iwd~~~~~~~-~~~~~--~h~~~V~~l~~spdg~~lasg~~dg--- 313 (415)
.++|++ +.|+.++.++. |++|++.++... ...+. .+...+.++.|+|||++|+..+.++
T Consensus 213 ~~~wspD~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~ 292 (741)
T 1yr2_A 213 GLAWLGNDALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDP 292 (741)
T ss_dssp CCEESTTSEEEEEECCCC--------CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCS
T ss_pred cEEEECCCEEEEEEecCcccccccccCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCC
Confidence 788985 57777776654 899999776521 22222 3334588999999999998877543
Q ss_pred --cEEEEECCCC--ceeEEeccCCCcEEEEEEcCCCCcEEEEEcC-CCCCeEEEEECCCC--cEEEEeeCC-CCEEEEEE
Q 014934 314 --RLFVWNQHST--QPVLKYCEHTAAVKAIAWSPHLHGLLASGGG-TADRCIRFWNTTTN--THLSCMDTG-SQVCNLVW 385 (415)
Q Consensus 314 --~I~iwd~~~~--~~~~~~~~h~~~V~~l~~sp~~~~llasggg-~~d~~I~iwd~~t~--~~~~~~~~~-~~V~~l~~ 385 (415)
.|++||+.++ +....+..+...+.... +|++..+++.... ..++.|.+||+.++ +....+.+. ..+..+.|
T Consensus 293 ~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~-~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~l~~~~~ 371 (741)
T 1yr2_A 293 VNTVHVARVTNGKIGPVTALIPDLKAQWDFV-DGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPESKDNLESVGI 371 (741)
T ss_dssp CCEEEEEEEETTEECCCEEEECSSSSCEEEE-EEETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEECCCSSEEEEEEE
T ss_pred cceEEEEECCCCCCcccEEecCCCCceEEEE-eccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEecCCCCeEEEEEE
Confidence 8999999877 42455656665555554 4888877766531 12567999999885 333333333 34667788
Q ss_pred CCCCCeEEEEEecCCCcEEEEECC
Q 014934 386 SKNVNELVSTHGYSQNQIIVWRYP 409 (415)
Q Consensus 386 s~~~~~l~s~~g~~dg~I~vw~~~ 409 (415)
+ ++..+++ ...++..+||.+.
T Consensus 372 ~-~~~lv~~--~~~dg~~~l~~~~ 392 (741)
T 1yr2_A 372 A-GNRLFAS--YIHDAKSQVLAFD 392 (741)
T ss_dssp E-BTEEEEE--EEETTEEEEEEEE
T ss_pred E-CCEEEEE--EEECCEEEEEEEe
Confidence 7 4444444 4567777666553
No 213
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.25 E-value=2.2e-09 Score=105.26 Aligned_cols=196 Identities=8% Similarity=-0.047 Sum_probs=138.3
Q ss_pred CCeEEEEEcCCCCeEEEEECCCcEEEEECCCCeeeEEecCCCccEEEEEee--CCEEEEEeCCC--cEEEEECCCCCccE
Q 014934 209 DSVCSVGWANRNTHLAVGTSHGKVQIWDASRCKRVRTMEGHRLRVGALAWS--SSLLSSGSRDK--SILQRDIRAQEDFV 284 (415)
Q Consensus 209 ~~V~~v~~sp~g~~la~g~~dg~V~iwd~~~~~~~~~l~~h~~~V~~l~~~--~~~l~sgs~dg--~I~iwd~~~~~~~~ 284 (415)
.....|+|+++|+++++...++.|++||..++........... .. ++|+ ++.|+++..++ .|.++|...... .
T Consensus 131 ~~P~~la~d~~g~lyv~d~~~~~I~~id~~~g~~~~~~~~~~~-~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~-~ 207 (409)
T 3hrp_A 131 KYMWGIAAVGNNTVLAYQRDDPRVRLISVDDNKVTTVHPGFKG-GK-PAVTKDKQRVYSIGWEGTHTVYVYMKASGWA-P 207 (409)
T ss_dssp CCEEEEEECSTTEEEEEETTTTEEEEEETTTTEEEEEEETCCB-CB-CEECTTSSEEEEEBSSTTCEEEEEEGGGTTC-E
T ss_pred CCceEEEEeCCCCEEEEecCCCcEEEEECCCCEEEEeeccCCC-Cc-eeEecCCCcEEEEecCCCceEEEEEcCCCce-e
Confidence 4688999999999777777778999999988776655544322 23 7777 56888888766 788998876542 2
Q ss_pred EEe----ccccCCeEEEEEeCCCCEEEEEeCCCcEEEEECCCCceeEE----eccCCCcE-E-EEEEcCCCCcEEEEEcC
Q 014934 285 SKL----SGHKSEVCGLKWSYDNRELASGGNDNRLFVWNQHSTQPVLK----YCEHTAAV-K-AIAWSPHLHGLLASGGG 354 (415)
Q Consensus 285 ~~~----~~h~~~V~~l~~spdg~~lasg~~dg~I~iwd~~~~~~~~~----~~~h~~~V-~-~l~~sp~~~~llasggg 354 (415)
..+ ......+.+++++|++..|..+..++.|+.||..++..... ..++...- . .++|+|++..|+++..
T Consensus 208 ~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~- 286 (409)
T 3hrp_A 208 TRIGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQ- 286 (409)
T ss_dssp EEEEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEET-
T ss_pred EEeeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEEEeC-
Confidence 233 22456788999999555555577788999999987754322 22222222 3 8999997666888876
Q ss_pred CCCCeEEEEECCCCcEEEEeeCC---------------CCEEEEEECCCCCeEEEEEec-CCCcEEEEECCCCc
Q 014934 355 TADRCIRFWNTTTNTHLSCMDTG---------------SQVCNLVWSKNVNELVSTHGY-SQNQIIVWRYPTMS 412 (415)
Q Consensus 355 ~~d~~I~iwd~~t~~~~~~~~~~---------------~~V~~l~~s~~~~~l~s~~g~-~dg~I~vw~~~s~~ 412 (415)
..+.|+.|+.... ........ .....++++++|+.+++ .. .++.|+.|++++++
T Consensus 287 -~~~~I~~~~~~g~-~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyva--d~~~~~~I~~~~~~~G~ 356 (409)
T 3hrp_A 287 -NLSSVYKITPDGE-CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIV--DGFKGYCLRKLDILDGY 356 (409)
T ss_dssp -TTTEEEEECTTCC-EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEE--ETTTTCEEEEEETTTTE
T ss_pred -CCCEEEEEecCCC-EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEE--eCCCCCEEEEEECCCCE
Confidence 6889999997643 22222221 34789999999996666 56 78899999976653
No 214
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=99.22 E-value=6.5e-09 Score=95.26 Aligned_cols=205 Identities=12% Similarity=0.076 Sum_probs=146.7
Q ss_pred CeEEeEecCCCCCeEEEEEcCCCCeEEEEEC---CCcEEEEECCCCeeeEEecCC-CccEEEEEeeCCEEEEEe-CCCcE
Q 014934 198 KVTKLCDLGIDDSVCSVGWANRNTHLAVGTS---HGKVQIWDASRCKRVRTMEGH-RLRVGALAWSSSLLSSGS-RDKSI 272 (415)
Q Consensus 198 ~~~~~~~~~~~~~V~~v~~sp~g~~la~g~~---dg~V~iwd~~~~~~~~~l~~h-~~~V~~l~~~~~~l~sgs-~dg~I 272 (415)
+++..+..+.......+.|+++|. |.+++. ++.|.++|+.+++.+..+.-. ......+++.++.|+.+. .++.+
T Consensus 10 ~vv~~~p~~~~~f~~Gl~~~~dg~-Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~g~~lyv~t~~~~~v 88 (266)
T 2iwa_A 10 EVLNEFPHDPYAFTQGLVYAENDT-LFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLLNEKLYQVVWLKNIG 88 (266)
T ss_dssp EEEEEEECCTTCCEEEEEECSTTE-EEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEETTCSEE
T ss_pred eEEEEEECCCCCCcccEEEeCCCe-EEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEeCCEEEEEEecCCEE
Confidence 344555434334578999999874 555442 578999999999988886522 223345777776655554 67899
Q ss_pred EEEECCCCCccEEEeccccCCeEEEEEeCCCCEEEEEeCCCcEEEEECCCCceeEEeccC-----CCcEEEEEEcCCCCc
Q 014934 273 LQRDIRAQEDFVSKLSGHKSEVCGLKWSYDNRELASGGNDNRLFVWNQHSTQPVLKYCEH-----TAAVKAIAWSPHLHG 347 (415)
Q Consensus 273 ~iwd~~~~~~~~~~~~~h~~~V~~l~~spdg~~lasg~~dg~I~iwd~~~~~~~~~~~~h-----~~~V~~l~~sp~~~~ 347 (415)
.++|..+.+ .+..+.....+ +..+++||+.|+++..++.|.++|..+.+.+..+.-- -..++.+.|. ++ .
T Consensus 89 ~viD~~t~~-v~~~i~~g~~~--g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~-dg-~ 163 (266)
T 2iwa_A 89 FIYDRRTLS-NIKNFTHQMKD--GWGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI-NG-E 163 (266)
T ss_dssp EEEETTTTE-EEEEEECCSSS--CCEEEECSSSEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TT-E
T ss_pred EEEECCCCc-EEEEEECCCCC--eEEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEE-CC-E
Confidence 999999876 45555422122 2345568887777777899999999998887776522 1246788888 55 4
Q ss_pred EEEEEcCCCCCeEEEEECCCCcEEEEeeCC--------------CCEEEEEECCCCCeEEEEEecCCCcEEEEECCCC
Q 014934 348 LLASGGGTADRCIRFWNTTTNTHLSCMDTG--------------SQVCNLVWSKNVNELVSTHGYSQNQIIVWRYPTM 411 (415)
Q Consensus 348 llasggg~~d~~I~iwd~~t~~~~~~~~~~--------------~~V~~l~~s~~~~~l~s~~g~~dg~I~vw~~~s~ 411 (415)
+++... .++.|.+.|..+++.+..++.+ ....+++|+++++.|+++ |...+.|.+.++...
T Consensus 164 lyvn~~--~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVT-gk~~~~v~~i~l~~~ 238 (266)
T 2iwa_A 164 VWANIW--QTDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVT-GKLWPKLFEIKLHLV 238 (266)
T ss_dssp EEEEET--TSSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEE-ETTCSEEEEEEEEEC
T ss_pred EEEecC--CCCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEE-CCCCCeEEEEEEecc
Confidence 777775 6889999999999999998753 357899999999888876 556778888887543
No 215
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=99.20 E-value=1.4e-11 Score=119.43 Aligned_cols=199 Identities=12% Similarity=0.070 Sum_probs=117.2
Q ss_pred cEEEEEcCCeEEEEECCCCCeEEeEecCCCCCeEEEEEcCCCCeEEEEECCCcEEEEECCCCeeeEEecCCCcc-E-EEE
Q 014934 179 NVLAVGLGNCVYLWNACSSKVTKLCDLGIDDSVCSVGWANRNTHLAVGTSHGKVQIWDASRCKRVRTMEGHRLR-V-GAL 256 (415)
Q Consensus 179 ~~la~~~d~~V~iwd~~~~~~~~~~~~~~~~~V~~v~~sp~g~~la~g~~dg~V~iwd~~~~~~~~~l~~h~~~-V-~~l 256 (415)
.+++.+.++.|+.||..+|+....+.. +.+.+..+..++..+++++.||.|..||..+++.+..+..+... + ...
T Consensus 11 ~v~~gs~dg~v~a~d~~tG~~~W~~~~---~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~~~~~sp 87 (369)
T 2hz6_A 11 LLFVSTLDGSLHAVSKRTGSIKWTLKE---DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPELVQASP 87 (369)
T ss_dssp EEEEEETTSEEEEEETTTCCEEEEEEC---CCSCCCC-----CCEEECTTTCCEEEC-----CCSEECSCCHHHHHTTCS
T ss_pred EEEEEcCCCEEEEEECCCCCEEEEecC---CCceecceEcCCCEEEEeCCCCEEEEEECCCCceeeeeeccCccccccCc
Confidence 444555689999999999998877763 45555556677888888889999999999998877666543211 1 011
Q ss_pred Ee-eCCEEEEEeCCCcEEEEECCCCCccEEEeccccCCeEEEEEeCCCCEEEEEeCCCcEEEEECCCCceeEEeccCCCc
Q 014934 257 AW-SSSLLSSGSRDKSILQRDIRAQEDFVSKLSGHKSEVCGLKWSYDNRELASGGNDNRLFVWNQHSTQPVLKYCEHTAA 335 (415)
Q Consensus 257 ~~-~~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~spdg~~lasg~~dg~I~iwd~~~~~~~~~~~~h~~~ 335 (415)
.. .+..+++|+.|+.|+.||.++++. +..+..+. ...++|++..+++++.|+.|+.||.++++.+.++..+.
T Consensus 88 ~~~~~~~v~~g~~dg~v~a~D~~tG~~-~w~~~~~~----~~~~~p~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~~~-- 160 (369)
T 2hz6_A 88 CRSSDGILYMGKKQDIWYVIDLLTGEK-QQTLSSAF----ADSLSPSTSLLYLGRTEYTITMYDTKTRELRWNATYFD-- 160 (369)
T ss_dssp CC-----CCCCEEEEEEEEECCC---------------------------EEEEEEEEEEECCCSSSSSCCCEEEEEE--
T ss_pred eEecCCEEEEEeCCCEEEEEECCCCcE-EEEecCCC----cccccccCCEEEEEecCCEEEEEECCCCCEEEeEeccc--
Confidence 11 356788888999999999998873 44444332 23456788899999999999999999998877664321
Q ss_pred EEEEEEcCCC---CcEEEEEcCCCCCeEEEEECCCCcEEEEeeCCCCEEE-EEECCCCC
Q 014934 336 VKAIAWSPHL---HGLLASGGGTADRCIRFWNTTTNTHLSCMDTGSQVCN-LVWSKNVN 390 (415)
Q Consensus 336 V~~l~~sp~~---~~llasggg~~d~~I~iwd~~t~~~~~~~~~~~~V~~-l~~s~~~~ 390 (415)
....++.++. ..+++.+ .|+.|+.||..+|+.+......+++.. ..++.++.
T Consensus 161 ~~~~~~~~~~~~~~~v~~~~---~dg~v~a~d~~tG~~~W~~~~~~pv~~~~~~~~dg~ 216 (369)
T 2hz6_A 161 YAASLPEDDVDYKMSHFVSN---GDGLVVTVDSESGDVLWIQNYASPVVAFYVWQREGL 216 (369)
T ss_dssp ECCBCCCCCTTCCCCEEEEE---TSCEEEEECTTTCCEEEEEECSSCEEEEEECTTSSC
T ss_pred ccCccccCCccccceEEEEC---CCCEEEEEECCCCcEEEEecCCCceEEEEEecCCce
Confidence 1223334321 3355543 699999999999999988887777654 44555664
No 216
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.18 E-value=2.8e-09 Score=99.58 Aligned_cols=184 Identities=10% Similarity=0.029 Sum_probs=129.3
Q ss_pred ceeEeecCC-CcEEEEEcCCeEEEEECCCCCeEEeEecC---CCCCeEEEEEcCCCCeEEEEECC---------CcEEEE
Q 014934 169 YLNLVDWSS-HNVLAVGLGNCVYLWNACSSKVTKLCDLG---IDDSVCSVGWANRNTHLAVGTSH---------GKVQIW 235 (415)
Q Consensus 169 ~i~~l~ws~-~~~la~~~d~~V~iwd~~~~~~~~~~~~~---~~~~V~~v~~sp~g~~la~g~~d---------g~V~iw 235 (415)
.+.++.+++ +++ .++.++.|++||..+++...+.... ....+..++++|+|+++++.... ..-.||
T Consensus 55 ~~~~i~~~~dG~l-~v~~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~ 133 (297)
T 3g4e_A 55 PVSSVALRQSGGY-VATIGTKFCALNWKEQSAVVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALY 133 (297)
T ss_dssp CEEEEEEBTTSSE-EEEETTEEEEEETTTTEEEEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEE
T ss_pred ceEEEEECCCCCE-EEEECCeEEEEECCCCcEEEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEE
Confidence 477899998 564 4445789999999988876665432 12357899999999966644321 234555
Q ss_pred ECCCCeeeEEecCCCccEEEEEee--CCEE-EEEeCCCcEEEEECC--CCCc----cEEEeccccCCeEEEEEeCCCCEE
Q 014934 236 DASRCKRVRTMEGHRLRVGALAWS--SSLL-SSGSRDKSILQRDIR--AQED----FVSKLSGHKSEVCGLKWSYDNREL 306 (415)
Q Consensus 236 d~~~~~~~~~l~~h~~~V~~l~~~--~~~l-~sgs~dg~I~iwd~~--~~~~----~~~~~~~h~~~V~~l~~spdg~~l 306 (415)
.+.....+..+..+......++|+ ++.| ++.+.++.|.+||+. ++.. ....+..+.....+++++++|++.
T Consensus 134 ~~d~~g~~~~~~~~~~~pngi~~spdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lw 213 (297)
T 3g4e_A 134 SLFPDHHVKKYFDQVDISNGLDWSLDHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLW 213 (297)
T ss_dssp EECTTSCEEEEEEEESBEEEEEECTTSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEE
T ss_pred EEECCCCEEEEeeccccccceEEcCCCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEE
Confidence 554322222233334456789998 3445 556668899999974 3321 122223344568899999999988
Q ss_pred EEEeCCCcEEEEECCCCceeEEeccCCCcEEEEEEc-CCCCcEEEEEc
Q 014934 307 ASGGNDNRLFVWNQHSTQPVLKYCEHTAAVKAIAWS-PHLHGLLASGG 353 (415)
Q Consensus 307 asg~~dg~I~iwd~~~~~~~~~~~~h~~~V~~l~~s-p~~~~llasgg 353 (415)
++....+.|.+||..+++.+..+..+...+++++|. |+++.|+++..
T Consensus 214 va~~~~~~v~~~d~~tG~~~~~i~~p~~~~t~~~f~g~d~~~L~vt~~ 261 (297)
T 3g4e_A 214 VACYNGGRVIRLDPVTGKRLQTVKLPVDKTTSCCFGGKNYSEMYVTCA 261 (297)
T ss_dssp EEEETTTEEEEECTTTCCEEEEEECSSSBEEEEEEESGGGCEEEEEEB
T ss_pred EEEcCCCEEEEEcCCCceEEEEEECCCCCceEEEEeCCCCCEEEEEcC
Confidence 888888899999999999998888787889999998 88888888775
No 217
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.16 E-value=1.6e-09 Score=103.44 Aligned_cols=223 Identities=10% Similarity=0.037 Sum_probs=144.5
Q ss_pred ceeEeecCC-CcEEEEEc---CCeEEEEECCCCCeEEeEe-----cCCCCCeEEEEEcCCCCeEEEEEC-----CCcEEE
Q 014934 169 YLNLVDWSS-HNVLAVGL---GNCVYLWNACSSKVTKLCD-----LGIDDSVCSVGWANRNTHLAVGTS-----HGKVQI 234 (415)
Q Consensus 169 ~i~~l~ws~-~~~la~~~---d~~V~iwd~~~~~~~~~~~-----~~~~~~V~~v~~sp~g~~la~g~~-----dg~V~i 234 (415)
....+++++ ++++++.. ++.+.||.+.++++...-. ..+-..+.+|+++++|+++++-.. ++.|.+
T Consensus 18 ~p~~va~~~~g~~~v~~~~~~~~~~~l~~~~~g~~~~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i~~ 97 (343)
T 2qe8_A 18 APGNITLTPDGRLFLSLHQFYQPEMQVAELTQDGLIPFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQSKSVPKLVA 97 (343)
T ss_dssp CEEEEEECTTSCEEEEECGGGCCSCSEEEEETTEEEESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHHHHTSCCEEEE
T ss_pred CcceEEECCCCCEEEEeCCCCCCceEEEEECCCCeecCCCcccCcccceeEeeEEEEcCCCcEEEEcCCCCcCCCCeEEE
Confidence 467888887 66766642 3324444443554331110 123467999999999886665443 578999
Q ss_pred EECCCCeeeEEecC------CCccEEEEEee--CCEE-EEEe---CCCcEEEEECCCCCccEEEeccc------------
Q 014934 235 WDASRCKRVRTMEG------HRLRVGALAWS--SSLL-SSGS---RDKSILQRDIRAQEDFVSKLSGH------------ 290 (415)
Q Consensus 235 wd~~~~~~~~~l~~------h~~~V~~l~~~--~~~l-~sgs---~dg~I~iwd~~~~~~~~~~~~~h------------ 290 (415)
||+.+++.+..+.. +...+..++++ +..+ ++.. .++.|.+||+.++. ....+.+|
T Consensus 98 ~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~-~~r~~~~~~~~~~~~~~~~~ 176 (343)
T 2qe8_A 98 WDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGL-AARVLQGYPGIAPEDIDLVI 176 (343)
T ss_dssp EETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCC-EEEECTTCTTTSCCSCCCEE
T ss_pred EECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCC-EEEEecCCCcccccccceeE
Confidence 99999987766642 22356788887 3454 4444 57899999998665 33333322
Q ss_pred -----------------cCCeEEEEEeCCCCEEEEEeCCC-cEEEEECC---CCc-----ee--EEeccCCCcEEEEEEc
Q 014934 291 -----------------KSEVCGLKWSYDNRELASGGNDN-RLFVWNQH---STQ-----PV--LKYCEHTAAVKAIAWS 342 (415)
Q Consensus 291 -----------------~~~V~~l~~spdg~~lasg~~dg-~I~iwd~~---~~~-----~~--~~~~~h~~~V~~l~~s 342 (415)
...+.+|+|+|+|+.|+++..++ .|+.++.. .+. .. ....++......++++
T Consensus 177 ~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~pdgia~d 256 (343)
T 2qe8_A 177 DGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHSTSMYRIKSADLSNLQLTDAELGSKIERYSEKPICDGISID 256 (343)
T ss_dssp TTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCSEEEEEEHHHHTCTTCCHHHHHTTCEEEEECCSCSCEEEC
T ss_pred CCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCCCeEEEEEHHHhcCCCCChhhhhcceEecccCCCCceEEEC
Confidence 12368899999999888887665 56555532 111 00 0111344456679999
Q ss_pred CCCCcEEEEEcCCCCCeEEEEECCCCcEEEEeeC--CCCEEEEEECCCCCeEEEE
Q 014934 343 PHLHGLLASGGGTADRCIRFWNTTTNTHLSCMDT--GSQVCNLVWSKNVNELVST 395 (415)
Q Consensus 343 p~~~~llasggg~~d~~I~iwd~~t~~~~~~~~~--~~~V~~l~~s~~~~~l~s~ 395 (415)
++|. ++++.. .++.|.+||..+|+....... ...+.+++|.++++.++++
T Consensus 257 ~~G~-l~va~~--~~~~V~~~d~~~G~~~~~~~~~~~~~p~~va~~~~g~l~v~~ 308 (343)
T 2qe8_A 257 KDHN-IYVGDL--AHSAIGVITSADRAYKLLVTDEKLSWTDSFNFGSDGYLYFDC 308 (343)
T ss_dssp TTCC-EEEEEG--GGTEEEEEETTTTEEEEEEECGGGSCEEEEEECTTSCEEEEE
T ss_pred CCCC-EEEEcc--CCCeEEEEECCCCCEEEEEECCceecCCeeEECCCCcEEEEe
Confidence 9986 777765 689999999866764333332 4568999999998877774
No 218
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.15 E-value=7.2e-10 Score=106.90 Aligned_cols=233 Identities=8% Similarity=-0.039 Sum_probs=154.9
Q ss_pred EeecCC-CcEEEEEc-----------CCeEEEEECCCCCeEEeEecCC------CCCeEEEEEcCCCCeEEEEEC--CCc
Q 014934 172 LVDWSS-HNVLAVGL-----------GNCVYLWNACSSKVTKLCDLGI------DDSVCSVGWANRNTHLAVGTS--HGK 231 (415)
Q Consensus 172 ~l~ws~-~~~la~~~-----------d~~V~iwd~~~~~~~~~~~~~~------~~~V~~v~~sp~g~~la~g~~--dg~ 231 (415)
.+.++| +..+.++. ++.|.+||..+++....+.++. ......+.++|||++|+++.. +..
T Consensus 69 ~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~g~~P~~ia~SpDGk~lyVan~~~~~~ 148 (368)
T 1mda_H 69 LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAA 148 (368)
T ss_dssp EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSSSCE
T ss_pred ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccccccCCCcceEEEcCCCCEEEEEccCCCCe
Confidence 577888 55555553 5789999999999988886541 134678999999999999875 456
Q ss_pred EEE--EECCCCeeeEEecCCCccEEEEEee-CCEEEEEeCCCcEEEEECCC----CCccEE----EeccccCCeEEEEEe
Q 014934 232 VQI--WDASRCKRVRTMEGHRLRVGALAWS-SSLLSSGSRDKSILQRDIRA----QEDFVS----KLSGHKSEVCGLKWS 300 (415)
Q Consensus 232 V~i--wd~~~~~~~~~l~~h~~~V~~l~~~-~~~l~sgs~dg~I~iwd~~~----~~~~~~----~~~~h~~~V~~l~~s 300 (415)
|.+ +|..+ +..+... +. ..+... ...+++.+.||.+.+.|+.. ..+... .+.....+. . .
T Consensus 149 v~V~~iD~~t---v~~i~v~-~~-~~~~p~g~~~~~~~~~dg~~~~vd~~~~~~~~~~v~~~~t~~i~vg~~P~---~-~ 219 (368)
T 1mda_H 149 AGLSVPGASD---DQLTKSA-SC-FHIHPGAAATHYLGSCPASLAASDLAAAPAAAGIVGAQCTGAQNCSSQAA---Q-A 219 (368)
T ss_dssp EEEEETTTEE---EEEEECS-SC-CCCEEEETTEEECCCCTTSCEEEECCSSCCCCEECCCCSCTTSCBCSCCE---E-E
T ss_pred EEEEEEchhh---ceEEECC-Cc-eEEccCCCeEEEEEcCCCCEEEEECccccccCCeEEEEeeeeeeCCCCcc---c-c
Confidence 888 99877 3444311 11 112222 35666777899998899876 221111 011112233 3 6
Q ss_pred CCCCEEEEEeCCCcEEEEECCCCc--eeEEecc-------CC---CcEEEEEEcCCCCcEEEEEc-C-CC----CCeEEE
Q 014934 301 YDNRELASGGNDNRLFVWNQHSTQ--PVLKYCE-------HT---AAVKAIAWSPHLHGLLASGG-G-TA----DRCIRF 362 (415)
Q Consensus 301 pdg~~lasg~~dg~I~iwd~~~~~--~~~~~~~-------h~---~~V~~l~~sp~~~~llasgg-g-~~----d~~I~i 362 (415)
+++..++..+. +.|.+.|+.+.. .+..+.- +. .....++++|+++.++++.. . .. +..+.+
T Consensus 220 ~~~~~~~~vs~-~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~v~~s~dg~~lyV~~~~~~~~~~~~~~~~~V 298 (368)
T 1mda_H 220 NYPGMLVWAVA-SSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSS 298 (368)
T ss_dssp TTTTEEEECBS-SCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEEEETTTTEEEEEEEECSSCTTSCEEEEEE
T ss_pred ccCCEEEEEcC-CEEEEEECCCCcceEEEEEEeccccccccccccCcceeeEEcCCCCEEEEEeccccCcccccCCCEEE
Confidence 67777766667 999999987543 2222210 00 11122689999998887642 0 00 234569
Q ss_pred EECCCCcEEEEeeCCCCEEEEEECCCCCeEEEEEecCCCcEEEEECCCCccc
Q 014934 363 WNTTTNTHLSCMDTGSQVCNLVWSKNVNELVSTHGYSQNQIIVWRYPTMSKV 414 (415)
Q Consensus 363 wd~~t~~~~~~~~~~~~V~~l~~s~~~~~l~s~~g~~dg~I~vw~~~s~~~l 414 (415)
+|+.+++.+..+..+....++.|+++|+.++.+.+..++.|.++|..+++.+
T Consensus 299 iD~~t~~vv~~i~vg~~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~t~kvv 350 (368)
T 1mda_H 299 VTASVGQTSGPISNGHDSDAIIAAQDGASDNYANSAGTEVLDIYDAASDQDQ 350 (368)
T ss_dssp EESSSCCEEECCEEEEEECEEEECCSSSCEEEEEETTTTEEEEEESSSCEEE
T ss_pred EECCCCeEEEEEECCCCcceEEECCCCCEEEEEccCCCCeEEEEECCCCcEE
Confidence 9999999999998777899999999999766654435899999999988643
No 219
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.15 E-value=1.2e-09 Score=114.51 Aligned_cols=199 Identities=13% Similarity=0.134 Sum_probs=134.1
Q ss_pred CCCCeEEEEEcCCCCeEEEEEC-----CCcEEEEECCCCeeeEEecCCCccEEEEEee-CCEEEEEeCCCc---------
Q 014934 207 IDDSVCSVGWANRNTHLAVGTS-----HGKVQIWDASRCKRVRTMEGHRLRVGALAWS-SSLLSSGSRDKS--------- 271 (415)
Q Consensus 207 ~~~~V~~v~~sp~g~~la~g~~-----dg~V~iwd~~~~~~~~~l~~h~~~V~~l~~~-~~~l~sgs~dg~--------- 271 (415)
+...+..++|||||++||.+.. ...|++||+.+++.+.... +......++|+ ++.|+.++.+..
T Consensus 127 ~~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~~-~~~k~~~~~WsDg~~l~y~~~~~~~~~~~~~~~ 205 (693)
T 3iuj_A 127 GTTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLETPL-KDVKFSGISWLGNEGFFYSSYDKPDGSELSART 205 (693)
T ss_dssp SCCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEEEE-EEEESCCCEEETTTEEEEEESSCCC-------C
T ss_pred CcEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCcccc-CCceeccEEEeCCCEEEEEEecCcccccccccC
Confidence 3456888999999999986543 2469999999988654311 11112456676 677888777743
Q ss_pred ----EEEEECCCCCcc-EEEe--cc-ccCCeEEEEEeCCCCEEEEEe----CCCcEEEEECCCCc-eeEEeccCCCcEEE
Q 014934 272 ----ILQRDIRAQEDF-VSKL--SG-HKSEVCGLKWSYDNRELASGG----NDNRLFVWNQHSTQ-PVLKYCEHTAAVKA 338 (415)
Q Consensus 272 ----I~iwd~~~~~~~-~~~~--~~-h~~~V~~l~~spdg~~lasg~----~dg~I~iwd~~~~~-~~~~~~~h~~~V~~ 338 (415)
|++|++.+.... ...+ .. |...+.++.|+|||++|+... .++.|+++|+.++. ....+..+......
T Consensus 206 ~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~~~~~~~~ 285 (693)
T 3iuj_A 206 DQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQGDLDADVS 285 (693)
T ss_dssp CCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEECSSSSCEE
T ss_pred CCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeCCCCceEE
Confidence 999999876532 2222 23 444578899999999886543 23589999998764 45566667766665
Q ss_pred EEEcCCCCcEEEEEcC-CCCCeEEEEECCCCcE---EEEeeCCCCEEEEEECCCCCeEEEEEecCCC--cEEEEECCC
Q 014934 339 IAWSPHLHGLLASGGG-TADRCIRFWNTTTNTH---LSCMDTGSQVCNLVWSKNVNELVSTHGYSQN--QIIVWRYPT 410 (415)
Q Consensus 339 l~~sp~~~~llasggg-~~d~~I~iwd~~t~~~---~~~~~~~~~V~~l~~s~~~~~l~s~~g~~dg--~I~vw~~~s 410 (415)
. |++++..+++.... .....|..+|+.++.. ...+.+...+. .|+++++.|+.+. ..++ .|.+|++..
T Consensus 286 ~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~--~~s~~g~~lv~~~-~~~g~~~l~~~d~~g 359 (693)
T 3iuj_A 286 L-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQVL--TVHSGSGYLFAEY-MVDATARVEQFDYEG 359 (693)
T ss_dssp E-EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCE--EEEEETTEEEEEE-EETTEEEEEEECTTS
T ss_pred E-EeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCCEE--EEEEECCEEEEEE-EECCeeEEEEEECCC
Confidence 5 67777777776641 1246899999988754 23334444444 8999999988752 3444 688888764
No 220
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.12 E-value=1.4e-07 Score=86.39 Aligned_cols=227 Identities=6% Similarity=-0.046 Sum_probs=146.9
Q ss_pred cEEEEEcCCeEEEEECCCCCeE-----EeEecCCCCCeEEEEEcCCCCeEEEEE-CCCcEEEEECCCCeeeEEecCCCcc
Q 014934 179 NVLAVGLGNCVYLWNACSSKVT-----KLCDLGIDDSVCSVGWANRNTHLAVGT-SHGKVQIWDASRCKRVRTMEGHRLR 252 (415)
Q Consensus 179 ~~la~~~d~~V~iwd~~~~~~~-----~~~~~~~~~~V~~v~~sp~g~~la~g~-~dg~V~iwd~~~~~~~~~l~~h~~~ 252 (415)
.+|..+..+.|+.+++...... .++. .....+.+++|++++..|.++. .++.|..++.........+......
T Consensus 2 ~~l~~~~~~~I~~~~~~g~~~~~~~~~~~~~-~~~~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~ 80 (267)
T 1npe_A 2 THLLFAQTGKIERLPLERNTMKKTEAKAFLH-IPAKVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDLGS 80 (267)
T ss_dssp EEEEEEEEEEEEEEEESSSCBCGGGCEEEEE-EEEEEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTCCC
T ss_pred cEEEEEcCCeEEEEEecCcccccccceeeec-CCCCcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEEECCCCC
Confidence 3455555568999998765432 1221 1124578999999766565554 5678999998765443334333356
Q ss_pred EEEEEee--CCEEE-EEeCCCcEEEEECCCCCccEEEeccccCCeEEEEEeCCCCEEEEEeC---CCcEEEEECCCCcee
Q 014934 253 VGALAWS--SSLLS-SGSRDKSILQRDIRAQEDFVSKLSGHKSEVCGLKWSYDNRELASGGN---DNRLFVWNQHSTQPV 326 (415)
Q Consensus 253 V~~l~~~--~~~l~-sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~spdg~~lasg~~---dg~I~iwd~~~~~~~ 326 (415)
...++++ +..|+ +-...+.|.++++..... ............+++++|++..|..+.. .+.|..+++.... .
T Consensus 81 p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~-~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~-~ 158 (267)
T 1npe_A 81 PEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQR-RVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTN-R 158 (267)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEETTSCSC-EEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCC-C
T ss_pred ccEEEEEecCCeEEEEECCCCEEEEEEcCCCCE-EEEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCC-c
Confidence 7888887 34444 445567899999875432 2222222246789999997666555443 4689888876433 2
Q ss_pred EEe-ccCCCcEEEEEEcCCCCcEEEEEcCCCCCeEEEEECCCCcEEEEeeCCCCEEEEEECCCCCeEEEEEecCCCcEEE
Q 014934 327 LKY-CEHTAAVKAIAWSPHLHGLLASGGGTADRCIRFWNTTTNTHLSCMDTGSQVCNLVWSKNVNELVSTHGYSQNQIIV 405 (415)
Q Consensus 327 ~~~-~~h~~~V~~l~~sp~~~~llasggg~~d~~I~iwd~~t~~~~~~~~~~~~V~~l~~s~~~~~l~s~~g~~dg~I~v 405 (415)
..+ .........++++|++..|+++.. ..+.|.++|.........+.......+++.. +..|..+ ....+.|.+
T Consensus 159 ~~~~~~~~~~P~gia~d~~~~~lyv~d~--~~~~I~~~~~~g~~~~~~~~~~~~P~gi~~d--~~~lyva-~~~~~~v~~ 233 (267)
T 1npe_A 159 RILAQDNLGLPNGLTFDAFSSQLCWVDA--GTHRAECLNPAQPGRRKVLEGLQYPFAVTSY--GKNLYYT-DWKTNSVIA 233 (267)
T ss_dssp EEEECTTCSCEEEEEEETTTTEEEEEET--TTTEEEEEETTEEEEEEEEECCCSEEEEEEE--TTEEEEE-ETTTTEEEE
T ss_pred EEEEECCCCCCcEEEEcCCCCEEEEEEC--CCCEEEEEecCCCceEEEecCCCCceEEEEe--CCEEEEE-ECCCCeEEE
Confidence 222 233356789999998887888876 6789999999865544444444556677764 4555554 456789999
Q ss_pred EECCCCcc
Q 014934 406 WRYPTMSK 413 (415)
Q Consensus 406 w~~~s~~~ 413 (415)
++..+++.
T Consensus 234 ~d~~~g~~ 241 (267)
T 1npe_A 234 MDLAISKE 241 (267)
T ss_dssp EETTTTEE
T ss_pred EeCCCCCc
Confidence 99887653
No 221
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=99.09 E-value=4.4e-08 Score=89.72 Aligned_cols=194 Identities=10% Similarity=0.000 Sum_probs=141.8
Q ss_pred ceeEeecCCCcEEEEE-c---CCeEEEEECCCCCeEEeEecCCCCCeEEEEEcCCCCeEEEEE-CCCcEEEEECCCCeee
Q 014934 169 YLNLVDWSSHNVLAVG-L---GNCVYLWNACSSKVTKLCDLGIDDSVCSVGWANRNTHLAVGT-SHGKVQIWDASRCKRV 243 (415)
Q Consensus 169 ~i~~l~ws~~~~la~~-~---d~~V~iwd~~~~~~~~~~~~~~~~~V~~v~~sp~g~~la~g~-~dg~V~iwd~~~~~~~ 243 (415)
+...+.|+++..|.++ . ++.|.++|..++++.....++.......+++. |+.|.+++ .++.|.++|..+.+.+
T Consensus 22 f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~--g~~lyv~t~~~~~v~viD~~t~~v~ 99 (266)
T 2iwa_A 22 FTQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLL--NEKLYQVVWLKNIGFIYDRRTLSNI 99 (266)
T ss_dssp CEEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEE--TTEEEEEETTCSEEEEEETTTTEEE
T ss_pred CcccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEe--CCEEEEEEecCCEEEEEECCCCcEE
Confidence 4678889983344444 2 47999999999999988876543344455554 55665555 5789999999999999
Q ss_pred EEecCCCccEEEEEeeCCEEEEEeCCCcEEEEECCCCCccEEEecccc-----CCeEEEEEeCCCCEEEEEeCCCcEEEE
Q 014934 244 RTMEGHRLRVGALAWSSSLLSSGSRDKSILQRDIRAQEDFVSKLSGHK-----SEVCGLKWSYDNRELASGGNDNRLFVW 318 (415)
Q Consensus 244 ~~l~~h~~~V~~l~~~~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~-----~~V~~l~~spdg~~lasg~~dg~I~iw 318 (415)
.++......-..++++++.|+++..++.|.++|..+.+. ...+.-.. ..+..+.|. +|..++....++.|.+.
T Consensus 100 ~~i~~g~~~g~glt~Dg~~l~vs~gs~~l~viD~~t~~v-~~~I~Vg~~~~p~~~~nele~~-dg~lyvn~~~~~~V~vI 177 (266)
T 2iwa_A 100 KNFTHQMKDGWGLATDGKILYGSDGTSILYEIDPHTFKL-IKKHNVKYNGHRVIRLNELEYI-NGEVWANIWQTDCIARI 177 (266)
T ss_dssp EEEECCSSSCCEEEECSSSEEEECSSSEEEEECTTTCCE-EEEEECEETTEECCCEEEEEEE-TTEEEEEETTSSEEEEE
T ss_pred EEEECCCCCeEEEEECCCEEEEECCCCeEEEEECCCCcE-EEEEEECCCCcccccceeEEEE-CCEEEEecCCCCeEEEE
Confidence 888632122345777877777777789999999988763 44433211 246788888 77666666678999999
Q ss_pred ECCCCceeEEeccC-------------CCcEEEEEEcCCCCcEEEEEcCCCCCeEEEEECCCC
Q 014934 319 NQHSTQPVLKYCEH-------------TAAVKAIAWSPHLHGLLASGGGTADRCIRFWNTTTN 368 (415)
Q Consensus 319 d~~~~~~~~~~~~h-------------~~~V~~l~~sp~~~~llasggg~~d~~I~iwd~~t~ 368 (415)
|..+++.+..+.-. ......|+|+|+++.+++++. ....|.+.++...
T Consensus 178 D~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk--~~~~v~~i~l~~~ 238 (266)
T 2iwa_A 178 SAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGK--LWPKLFEIKLHLV 238 (266)
T ss_dssp ETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEET--TCSEEEEEEEEEC
T ss_pred ECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECC--CCCeEEEEEEecc
Confidence 99999988887531 135689999999999999987 7888888887654
No 222
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=99.07 E-value=4.1e-08 Score=98.92 Aligned_cols=228 Identities=13% Similarity=0.040 Sum_probs=160.9
Q ss_pred CcEEEEEc--CCeEEEEECCCCCeEEeEecCCCCCeEEEEE-c-CCCCeEEEEE------------------CCCcEEEE
Q 014934 178 HNVLAVGL--GNCVYLWNACSSKVTKLCDLGIDDSVCSVGW-A-NRNTHLAVGT------------------SHGKVQIW 235 (415)
Q Consensus 178 ~~~la~~~--d~~V~iwd~~~~~~~~~~~~~~~~~V~~v~~-s-p~g~~la~g~------------------~dg~V~iw 235 (415)
++.|.+.. ++.|.+.|+.+.++.+++.+.....+..+++ + |+++++++++ .++.|.++
T Consensus 101 G~~lfVnd~~~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vtvI 180 (595)
T 1fwx_A 101 GRFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFTAV 180 (595)
T ss_dssp EEEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEEEE
T ss_pred CCEEEEEcCCCCEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEEEE
Confidence 34555553 4679999999999988877766667899998 5 9999998884 24579999
Q ss_pred ECCCCeeeEEecC-CCccEEEEEeeCCEEEEEeCCC--------------------------------------cEEEEE
Q 014934 236 DASRCKRVRTMEG-HRLRVGALAWSSSLLSSGSRDK--------------------------------------SILQRD 276 (415)
Q Consensus 236 d~~~~~~~~~l~~-h~~~V~~l~~~~~~l~sgs~dg--------------------------------------~I~iwd 276 (415)
|..+.+.+..+.- ..-.-..+...++++++.+.+. .|.+.|
T Consensus 181 D~~t~~v~~qI~Vgg~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V~VID 260 (595)
T 1fwx_A 181 DADKWEVAWQVLVSGNLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVKVVD 260 (595)
T ss_dssp ETTTTEEEEEEEESSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEEEEE
T ss_pred ECCCCeEEEEEEeCCCccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcEEEEe
Confidence 9999887776652 1111122222355655555332 477788
Q ss_pred CCC--CCccEEEeccccCCeEEEEEeCCCCEEEEEe-CCCcEEEEECCCCc------------eeEEeccCCCcEEEEEE
Q 014934 277 IRA--QEDFVSKLSGHKSEVCGLKWSYDNRELASGG-NDNRLFVWNQHSTQ------------PVLKYCEHTAAVKAIAW 341 (415)
Q Consensus 277 ~~~--~~~~~~~~~~h~~~V~~l~~spdg~~lasg~-~dg~I~iwd~~~~~------------~~~~~~~h~~~V~~l~~ 341 (415)
.++ +...+..+.. .....++.++|||+++++++ .+++|.++|+.+.+ .+.+. .-......++|
T Consensus 261 ~~~~~~~~~~~~Ipv-g~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v-~vG~gP~h~aF 338 (595)
T 1fwx_A 261 GRKEASSLFTRYIPI-ANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEP-ELGLGPLHTAF 338 (595)
T ss_dssp CSGGGCCSSEEEEEE-ESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECC-BCCSCEEEEEE
T ss_pred CcccCCceeEEEEec-CCCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEc-CCCCCcceEEE
Confidence 876 3322333332 23567899999999877655 67899999998653 22333 33456789999
Q ss_pred cCCCCcEEEEEcCCCCCeEEEEECCC----------CcEEEEeeCCCCEEEE------EECCCCCeEEEEEecCCCcE--
Q 014934 342 SPHLHGLLASGGGTADRCIRFWNTTT----------NTHLSCMDTGSQVCNL------VWSKNVNELVSTHGYSQNQI-- 403 (415)
Q Consensus 342 sp~~~~llasggg~~d~~I~iwd~~t----------~~~~~~~~~~~~V~~l------~~s~~~~~l~s~~g~~dg~I-- 403 (415)
+|+| +++++.. .|+.|.+||+.+ .+.+..++.+.+.-.. .+++||++|+++...+...+
T Consensus 339 ~~dG-~aY~t~~--ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~~~~g~t~~~DGk~l~~~Nk~skdr~~~ 415 (595)
T 1fwx_A 339 DGRG-NAYTSLF--LDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGETLDATNDWLVCLSKFSKDRFLN 415 (595)
T ss_dssp CTTS-EEEEEET--TTTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEETTTTSTTCCSSEEEEEESCCTTSSCC
T ss_pred CCCC-eEEEEEe--cCCcEEEEEhhHhhhhhcccccceeEEEeecccccccceeccceEeCCCCCEEEEcCCCCcccccc
Confidence 9999 7888886 899999999987 6678888877665333 44799999999877774455
Q ss_pred ---------EEEECCC
Q 014934 404 ---------IVWRYPT 410 (415)
Q Consensus 404 ---------~vw~~~s 410 (415)
.++|+..
T Consensus 416 ~gp~~~~~~ql~dis~ 431 (595)
T 1fwx_A 416 VGPLKPENDQLIDISG 431 (595)
T ss_dssp CCSSCCEEEEEEECSS
T ss_pred CCCCCCCcceEEEcCC
Confidence 8899853
No 223
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=99.06 E-value=1.1e-08 Score=106.84 Aligned_cols=233 Identities=9% Similarity=0.070 Sum_probs=155.0
Q ss_pred CcEEEEEcCCeEEEEECCCCCeEEeEecC-CC---CCeEEEEEcCCCCeEEEEEC------CCcEEEEECCCCeeeEEec
Q 014934 178 HNVLAVGLGNCVYLWNACSSKVTKLCDLG-ID---DSVCSVGWANRNTHLAVGTS------HGKVQIWDASRCKRVRTME 247 (415)
Q Consensus 178 ~~~la~~~d~~V~iwd~~~~~~~~~~~~~-~~---~~V~~v~~sp~g~~la~g~~------dg~V~iwd~~~~~~~~~l~ 247 (415)
+.+++.+.++.|+.+|..+|+..-.+... .. ..+.+--.. .+..+++++. +|.|..||..+++.+-.+.
T Consensus 129 ~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~~p~v-~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~~ 207 (677)
T 1kb0_A 129 GKVYVGAWDGRLIALDAATGKEVWHQNTFEGQKGSLTITGAPRV-FKGKVIIGNGGAEYGVRGYITAYDAETGERKWRWF 207 (677)
T ss_dssp TEEEEECTTSEEEEEETTTCCEEEEEETTTTCCSSCBCCSCCEE-ETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEE
T ss_pred CEEEEEcCCCEEEEEECCCCCEEeeecCCcCcCcCcccccCcEE-ECCEEEEEecccccCCCCEEEEEECCCCcEEEEec
Confidence 44555557899999999999988777643 10 112110011 2445666654 6899999999999876664
Q ss_pred CCCcc--------------------------------EEEEEee--CCEEEEEeCCC-------------------cEEE
Q 014934 248 GHRLR--------------------------------VGALAWS--SSLLSSGSRDK-------------------SILQ 274 (415)
Q Consensus 248 ~h~~~--------------------------------V~~l~~~--~~~l~sgs~dg-------------------~I~i 274 (415)
..... ...++++ .+.++.+..++ .|..
T Consensus 208 ~~~~~~~~~~~~~~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~A 287 (677)
T 1kb0_A 208 SVPGDPSKPFEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVA 287 (677)
T ss_dssp SSCCCTTSCCSSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEE
T ss_pred cCCCCccccccccccccccccccccCceeEeCCCcccccceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEEEEE
Confidence 32111 0134554 46788777664 4999
Q ss_pred EECCCCCccEEEec--ccc-------CCeEEEEEeCCC---CEEEEEeCCCcEEEEECCCCceeEEeccCC---------
Q 014934 275 RDIRAQEDFVSKLS--GHK-------SEVCGLKWSYDN---RELASGGNDNRLFVWNQHSTQPVLKYCEHT--------- 333 (415)
Q Consensus 275 wd~~~~~~~~~~~~--~h~-------~~V~~l~~spdg---~~lasg~~dg~I~iwd~~~~~~~~~~~~h~--------- 333 (415)
+|.++++. +-.++ .|. ....-+....+| ..++.++.+|.|+++|..+++.+..+....
T Consensus 288 lD~~TG~~-~W~~~~~~~d~wd~~~~~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~~d~ 366 (677)
T 1kb0_A 288 LDPDTGKY-KWHYQETPGDNWDYTSTQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASGYDK 366 (677)
T ss_dssp ECTTTCCE-EEEEESSTTCCSCCCCCSCCEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEECT
T ss_pred EECCCCCE-EEEEecCCCcccccccCCCcEEEecccCCcEeeEEEEECCCCEEEEEECCCCCEeccccccccCcccccCC
Confidence 99998874 33322 121 122223344477 688999999999999999999887764221
Q ss_pred -C-cE------------------------EEEEEcCCCCcEEEEEc--------------C-------------------
Q 014934 334 -A-AV------------------------KAIAWSPHLHGLLASGG--------------G------------------- 354 (415)
Q Consensus 334 -~-~V------------------------~~l~~sp~~~~llasgg--------------g------------------- 354 (415)
+ .+ ..++++|++..+++... |
T Consensus 367 ~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~ 446 (677)
T 1kb0_A 367 HGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFF 446 (677)
T ss_dssp TSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTTTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEE
T ss_pred CCceeeccccCcCCCccEECcCcccccCCCCceEcCCCCEEEEeChhcceeeeccccccccccccccccccccccccccc
Confidence 0 01 14678888775554321 0
Q ss_pred -------CCCCeEEEEECCCCcEEEEeeCCCCEEEEEECCCCCeEEEEEecCCCcEEEEECCCCccc
Q 014934 355 -------TADRCIRFWNTTTNTHLSCMDTGSQVCNLVWSKNVNELVSTHGYSQNQIIVWRYPTMSKV 414 (415)
Q Consensus 355 -------~~d~~I~iwd~~t~~~~~~~~~~~~V~~l~~s~~~~~l~s~~g~~dg~I~vw~~~s~~~l 414 (415)
...+.|..||+.+|+.+..+.++..+.+..+...+..++. |..||.|++||..+++.+
T Consensus 447 ~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~~~~~g~~~~~g~~v~~--g~~dg~l~a~D~~tG~~l 511 (677)
T 1kb0_A 447 NAEPPKSKPFGRLLAWDPVAQKAAWSVEHVSPWNGGTLTTAGNVVFQ--GTADGRLVAYHAATGEKL 511 (677)
T ss_dssp CSSCCCSCCEEEEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEEE--ECTTSEEEEEETTTCCEE
T ss_pred ccccCCCCCccEEEEEeCCCCcEEeecCCCCCCcCcceEeCCCEEEE--ECCCCcEEEEECCCCcee
Confidence 0127899999999999998887766666667777888877 678999999999998764
No 224
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=99.05 E-value=6.2e-08 Score=94.50 Aligned_cols=215 Identities=13% Similarity=0.064 Sum_probs=145.4
Q ss_pred CcEEEEE--cCCeEEEEECCCC----CeEEeEe---c--C-CCCCeEEEEEcCCCCeEEEEECC------CcEEEEECCC
Q 014934 178 HNVLAVG--LGNCVYLWNACSS----KVTKLCD---L--G-IDDSVCSVGWANRNTHLAVGTSH------GKVQIWDASR 239 (415)
Q Consensus 178 ~~~la~~--~d~~V~iwd~~~~----~~~~~~~---~--~-~~~~V~~v~~sp~g~~la~g~~d------g~V~iwd~~~ 239 (415)
.+.|.+. .++.|+++|..+. ++.+.++ + . .......+...|+| .++++..+ |.|.++|..+
T Consensus 95 r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~~T 173 (462)
T 2ece_A 95 RRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEGPGGILMLDHYS 173 (462)
T ss_dssp SCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCSCCEEEEECTTT
T ss_pred CCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCCCCCCeEEEEECCC
Confidence 4555554 3578999999765 5555552 1 0 11245667888999 66666555 7899999999
Q ss_pred CeeeEEecCCCc---cEEEEEee--CCEEEEEe-------------------CCCcEEEEECCCCCccEEEeccc--cCC
Q 014934 240 CKRVRTMEGHRL---RVGALAWS--SSLLSSGS-------------------RDKSILQRDIRAQEDFVSKLSGH--KSE 293 (415)
Q Consensus 240 ~~~~~~l~~h~~---~V~~l~~~--~~~l~sgs-------------------~dg~I~iwd~~~~~~~~~~~~~h--~~~ 293 (415)
.+.+..+..... .-..+.|+ .+.+++.. .+.+|.+||+.+++ .+..+..- ...
T Consensus 174 ~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k-~~~tI~vg~~g~~ 252 (462)
T 2ece_A 174 FEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRK-RIHSLTLGEENRM 252 (462)
T ss_dssp CCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTE-EEEEEESCTTEEE
T ss_pred CeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCc-EeeEEecCCCCCc
Confidence 999988863211 22346666 35677664 36889999999864 45555431 233
Q ss_pred eEEEEE--eCCCCEEEEEe------CCCcEEEEECCCCce--eEEe--ccC----------------CCcEEEEEEcCCC
Q 014934 294 VCGLKW--SYDNRELASGG------NDNRLFVWNQHSTQP--VLKY--CEH----------------TAAVKAIAWSPHL 345 (415)
Q Consensus 294 V~~l~~--spdg~~lasg~------~dg~I~iwd~~~~~~--~~~~--~~h----------------~~~V~~l~~sp~~ 345 (415)
...+.| +|+++++.+++ .++.|.+|....++. .+.+ ... ......|.++|++
T Consensus 253 P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~DG 332 (462)
T 2ece_A 253 ALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISLDD 332 (462)
T ss_dssp EEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEECTTS
T ss_pred cceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCceeEEEECCCC
Confidence 455656 99999988776 466888776554421 1111 110 2346789999999
Q ss_pred CcEEEEEcCCCCCeEEEEECCC---CcEEEEeeCCC---------------CEEEEEECCCCCeEEEEE
Q 014934 346 HGLLASGGGTADRCIRFWNTTT---NTHLSCMDTGS---------------QVCNLVWSKNVNELVSTH 396 (415)
Q Consensus 346 ~~llasggg~~d~~I~iwd~~t---~~~~~~~~~~~---------------~V~~l~~s~~~~~l~s~~ 396 (415)
++|+++.- ..+.|.+||+.. .+.+..+..++ .-..+.+++||++|+++.
T Consensus 333 rfLYVSnr--g~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSpDGk~LyVaN 399 (462)
T 2ece_A 333 KFLYLSLW--GIGEVRQYDISNPFKPVLTGKVKLGGIFHRADHPAGHKLTGAPQMLEISRDGRRVYVTN 399 (462)
T ss_dssp CEEEEEET--TTTEEEEEECSSTTSCEEEEEEECBTTTTCBCCTTSCCCCSCCCCEEECTTSSEEEEEC
T ss_pred CEEEEEeC--CCCEEEEEEecCCCCcEEEEEEEeCCeeccccccccccCCCCCCEEEEcCCCCEEEEEc
Confidence 99999886 578999999863 45666776652 247799999999999964
No 225
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=99.04 E-value=1.5e-07 Score=90.60 Aligned_cols=224 Identities=11% Similarity=0.034 Sum_probs=142.5
Q ss_pred CcEEEEEcCCeEEEEECCCCCeEEeEecCC--------CCCeEEEEEcCCCCeEEEEECCCcEEEEECCCCeeeEEecCC
Q 014934 178 HNVLAVGLGNCVYLWNACSSKVTKLCDLGI--------DDSVCSVGWANRNTHLAVGTSHGKVQIWDASRCKRVRTMEGH 249 (415)
Q Consensus 178 ~~~la~~~d~~V~iwd~~~~~~~~~~~~~~--------~~~V~~v~~sp~g~~la~g~~dg~V~iwd~~~~~~~~~l~~h 249 (415)
+.+++.+.++.|+.+|..+++..-...... ...+.+ ....++..+++++.+|.|..+|..+++.+-.....
T Consensus 54 ~~v~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~-~~~~~~~~v~v~~~~g~l~a~d~~tG~~~W~~~~~ 132 (376)
T 3q7m_A 54 NVVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSG-GVTVSGGHVYIGSEKAQVYALNTSDGTVAWQTKVA 132 (376)
T ss_dssp TEEEEECTTSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEE-EEEEETTEEEEEETTSEEEEEETTTCCEEEEEECS
T ss_pred CEEEEEcCCCeEEEEEccCCceeeeecCccccccccccCccccc-CceEeCCEEEEEcCCCEEEEEECCCCCEEEEEeCC
Confidence 344444457899999999999876665432 122322 22234667888999999999999999877665543
Q ss_pred CccEEEEEeeCCEEEEEeCCCcEEEEECCCCCccEEEeccccCCe-----EEEEEeCCCCEEEEEeCCCcEEEEECCCCc
Q 014934 250 RLRVGALAWSSSLLSSGSRDKSILQRDIRAQEDFVSKLSGHKSEV-----CGLKWSYDNRELASGGNDNRLFVWNQHSTQ 324 (415)
Q Consensus 250 ~~~V~~l~~~~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V-----~~l~~spdg~~lasg~~dg~I~iwd~~~~~ 324 (415)
..........+..++.++.++.|..+|..+++. +.......... ...... +..++.+..++.|..+|..+++
T Consensus 133 ~~~~~~p~~~~~~v~v~~~~g~l~~~d~~tG~~-~W~~~~~~~~~~~~~~~~~~~~--~~~v~~g~~~g~l~~~d~~tG~ 209 (376)
T 3q7m_A 133 GEALSRPVVSDGLVLIHTSNGQLQALNEADGAV-KWTVNLDMPSLSLRGESAPTTA--FGAAVVGGDNGRVSAVLMEQGQ 209 (376)
T ss_dssp SCCCSCCEEETTEEEEECTTSEEEEEETTTCCE-EEEEECCC-----CCCCCCEEE--TTEEEECCTTTEEEEEETTTCC
T ss_pred CceEcCCEEECCEEEEEcCCCeEEEEECCCCcE-EEEEeCCCCceeecCCCCcEEE--CCEEEEEcCCCEEEEEECCCCc
Confidence 322222334477899999999999999988873 33332211110 122222 4567888889999999999999
Q ss_pred eeEEeccCCCc-------EEEEEEcC--CCCcEEEEEcCCCCCeEEEEECCCCcEEEEeeCCCCEEEEEECCCCCeEEEE
Q 014934 325 PVLKYCEHTAA-------VKAIAWSP--HLHGLLASGGGTADRCIRFWNTTTNTHLSCMDTGSQVCNLVWSKNVNELVST 395 (415)
Q Consensus 325 ~~~~~~~h~~~-------V~~l~~sp--~~~~llasggg~~d~~I~iwd~~t~~~~~~~~~~~~V~~l~~s~~~~~l~s~ 395 (415)
.+.++...... +..+.-.| .+..+++ ++ .++.|..+|..+|+.+....... ...+.. ++..+++
T Consensus 210 ~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~-~~--~~g~l~~~d~~tG~~~w~~~~~~-~~~~~~--~~~~l~~- 282 (376)
T 3q7m_A 210 MIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFA-LA--YNGNLTALDLRSGQIMWKRELGS-VNDFIV--DGNRIYL- 282 (376)
T ss_dssp EEEEEECCC-----------CCCCCCEEETTEEEE-EC--TTSCEEEEETTTCCEEEEECCCC-EEEEEE--ETTEEEE-
T ss_pred EEEEEecccCCCCcccccccccCCCcEEECCEEEE-Ee--cCcEEEEEECCCCcEEeeccCCC-CCCceE--ECCEEEE-
Confidence 88776532110 00000111 1233444 33 68999999999999887765433 344443 3555666
Q ss_pred EecCCCcEEEEECCCCcc
Q 014934 396 HGYSQNQIIVWRYPTMSK 413 (415)
Q Consensus 396 ~g~~dg~I~vw~~~s~~~ 413 (415)
+..++.|..+|..+++.
T Consensus 283 -~~~~g~l~~~d~~tG~~ 299 (376)
T 3q7m_A 283 -VDQNDRVMALTIDGGVT 299 (376)
T ss_dssp -EETTCCEEEEETTTCCE
T ss_pred -EcCCCeEEEEECCCCcE
Confidence 45678899999887764
No 226
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=99.04 E-value=1.4e-08 Score=106.17 Aligned_cols=234 Identities=14% Similarity=0.107 Sum_probs=150.5
Q ss_pred CcEEEEEcCCeEEEEECCCCCeEEeEecC-CCCCeEEEEEcC--CCCeEEEEE------CCCcEEEEECCCCeeeEEecC
Q 014934 178 HNVLAVGLGNCVYLWNACSSKVTKLCDLG-IDDSVCSVGWAN--RNTHLAVGT------SHGKVQIWDASRCKRVRTMEG 248 (415)
Q Consensus 178 ~~~la~~~d~~V~iwd~~~~~~~~~~~~~-~~~~V~~v~~sp--~g~~la~g~------~dg~V~iwd~~~~~~~~~l~~ 248 (415)
+.+++.+.++.|+.+|..+|+..-..... +......+..+| .+..+++++ .+|.|..||..+++.+-.+..
T Consensus 122 g~v~v~~~dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~~~sP~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~ 201 (689)
T 1yiq_A 122 GKVYVGVLDGRLEAIDAKTGQRAWSVDTRADHKRSYTITGAPRVVNGKVVIGNGGAEFGVRGYVTAYDAETGKEAWRFYT 201 (689)
T ss_dssp TEEEEECTTSEEEEEETTTCCEEEEEECCSCTTSCCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEES
T ss_pred CEEEEEccCCEEEEEECCCCCEeeeecCcCCCCCCccccCCcEEECCEEEEEeCCCccCCCCEEEEEECCCCcEEEEecc
Confidence 44444456899999999999987666543 211111111122 133455554 368999999999998765541
Q ss_pred C--C-c----------------------------cEEEEEee--CCEEEEEeCCCc-------------------EEEEE
Q 014934 249 H--R-L----------------------------RVGALAWS--SSLLSSGSRDKS-------------------ILQRD 276 (415)
Q Consensus 249 h--~-~----------------------------~V~~l~~~--~~~l~sgs~dg~-------------------I~iwd 276 (415)
. . . ....++++ .++++.++.++. |..+|
T Consensus 202 ~~~~p~~~~~~~~~~~~~~~~~g~~w~~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~AlD 281 (689)
T 1yiq_A 202 VPGDPKLPPEGKGMEIAAKTWFGDAYVEQGGGGTAWDSFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAVN 281 (689)
T ss_dssp SCCCTTSCCCSHHHHHHHTTCCSSTHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEEEE
T ss_pred cCCCcccccccccccccccccCCceeeecCCCCccccceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEE
Confidence 1 0 0 00134555 478888887763 99999
Q ss_pred CCCCCccEEEecc--cc-------CCeEEEEEeCCCC---EEEEEeCCCcEEEEECCCCceeEEeccCC-CcE-------
Q 014934 277 IRAQEDFVSKLSG--HK-------SEVCGLKWSYDNR---ELASGGNDNRLFVWNQHSTQPVLKYCEHT-AAV------- 336 (415)
Q Consensus 277 ~~~~~~~~~~~~~--h~-------~~V~~l~~spdg~---~lasg~~dg~I~iwd~~~~~~~~~~~~h~-~~V------- 336 (415)
.++++. +-.+.. |. .++.......+|+ .++.++.+|.|+++|.++++++....... ...
T Consensus 282 ~~TG~~-~W~~~~~~~d~wd~~~~~~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~~~~~ 360 (689)
T 1yiq_A 282 ADTGEY-VWHYQTTPGDAWDYTATQHMILAELPIDGKPRKVLMQAPKNGFFYVIDRATGELLSAKGIVPQSWTKGMDMKT 360 (689)
T ss_dssp TTTCCE-EEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEEETTT
T ss_pred ccCCce-eEeeecCCcccccccCCCCcEEEeeccCCcEEEEEEEECCCCeEEEEECCCCCEeccccccccccccccCccC
Confidence 999884 333322 21 1222222333565 78899999999999999999875432110 000
Q ss_pred -------------------------------EEEEEcCCCCcEEEEEc------------------------C-------
Q 014934 337 -------------------------------KAIAWSPHLHGLLASGG------------------------G------- 354 (415)
Q Consensus 337 -------------------------------~~l~~sp~~~~llasgg------------------------g------- 354 (415)
..++++|+...+++... |
T Consensus 361 ~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p 440 (689)
T 1yiq_A 361 GRPILDEENAAYWKNGKRNLVTPAFWGAHDWQPMSYNPDTGLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLRTGMMP 440 (689)
T ss_dssp TEEEECHHHHCTTTSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEEECCSSCCCCCSCTTSCCCSSEECCCC
T ss_pred CCcccchhhccccCCCCeeEeCCCcccccCCCcceECCCCCEEEEeccccceeeeeccccccccccccccccCccccccC
Confidence 12678887764444311 0
Q ss_pred -----------CCCCeEEEEECCCCcEEEEeeCCCCEEEEEECCCCCeEEEEEecCCCcEEEEECCCCccc
Q 014934 355 -----------TADRCIRFWNTTTNTHLSCMDTGSQVCNLVWSKNVNELVSTHGYSQNQIIVWRYPTMSKV 414 (415)
Q Consensus 355 -----------~~d~~I~iwd~~t~~~~~~~~~~~~V~~l~~s~~~~~l~s~~g~~dg~I~vw~~~s~~~l 414 (415)
..++.|+.||+.+|+.+..+..+..+..-.+...+..++. |+.||.|+.||..+++.+
T Consensus 441 ~~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~~~~~g~~~tagglvf~--gt~dg~l~a~D~~tG~~l 509 (689)
T 1yiq_A 441 EGAEGLLEMAKSWSGKLIAWDPVKQQAAWEVPYVTIFNGGTLSTAGNLVFE--GSADGRVIAYAADTGEKL 509 (689)
T ss_dssp SSHHHHHHHHTTCEEEEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEEE--ECTTSEEEEEETTTCCEE
T ss_pred cccccCCCCCCCcceeEEEEECCCCCeEeEccCCCCccCccceECCCEEEE--ECCCCcEEEEECCCCccc
Confidence 0147899999999999988887665555566667777777 788999999999998865
No 227
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.03 E-value=6.3e-08 Score=91.71 Aligned_cols=180 Identities=9% Similarity=0.068 Sum_probs=124.3
Q ss_pred ceeEeecCC-CcEEEEEcCCeEEEEECCCCCeEEeEecCC---CCCeEEEEEcCCCCeEEEEEC------CCcEEEEECC
Q 014934 169 YLNLVDWSS-HNVLAVGLGNCVYLWNACSSKVTKLCDLGI---DDSVCSVGWANRNTHLAVGTS------HGKVQIWDAS 238 (415)
Q Consensus 169 ~i~~l~ws~-~~~la~~~d~~V~iwd~~~~~~~~~~~~~~---~~~V~~v~~sp~g~~la~g~~------dg~V~iwd~~ 238 (415)
.+.++.|++ ++++++. +..|++||..+++...+..... ...+.+++++++|+++++... .+.|..++
T Consensus 91 ~v~~i~~~~dg~l~v~~-~~gl~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~-- 167 (326)
T 2ghs_A 91 MGSALAKISDSKQLIAS-DDGLFLRDTATGVLTLHAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA-- 167 (326)
T ss_dssp CEEEEEEEETTEEEEEE-TTEEEEEETTTCCEEEEECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--
T ss_pred cceEEEEeCCCeEEEEE-CCCEEEEECCCCcEEEEeeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--
Confidence 477889988 5555554 5679999999988766544221 235889999999986654432 24565666
Q ss_pred CCeeeEEecCCCccEEEEEee--CCEE-EEEeCCCcEEEEECC--CC-C----ccEEEeccccCCeEEEEEeCCCCEEEE
Q 014934 239 RCKRVRTMEGHRLRVGALAWS--SSLL-SSGSRDKSILQRDIR--AQ-E----DFVSKLSGHKSEVCGLKWSYDNRELAS 308 (415)
Q Consensus 239 ~~~~~~~l~~h~~~V~~l~~~--~~~l-~sgs~dg~I~iwd~~--~~-~----~~~~~~~~h~~~V~~l~~spdg~~las 308 (415)
+++.. .+..+......++|+ ++.| ++.+.++.|.+||+. ++ . .....+......+.+++++++|+++++
T Consensus 168 ~g~~~-~~~~~~~~~~~i~~s~dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva 246 (326)
T 2ghs_A 168 KGKVT-KLFADISIPNSICFSPDGTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNA 246 (326)
T ss_dssp TTEEE-EEEEEESSEEEEEECTTSCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEE
T ss_pred CCcEE-EeeCCCcccCCeEEcCCCCEEEEEECCCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEE
Confidence 45433 232233456788998 3455 444567899999986 44 2 112223333456788999999998888
Q ss_pred EeCCCcEEEEECCCCceeEEeccCCCcEEEEEEc-CCCCcEEEEEc
Q 014934 309 GGNDNRLFVWNQHSTQPVLKYCEHTAAVKAIAWS-PHLHGLLASGG 353 (415)
Q Consensus 309 g~~dg~I~iwd~~~~~~~~~~~~h~~~V~~l~~s-p~~~~llasgg 353 (415)
...++.|.+||. +++.+..+..+...+.+++|. +++..|+++..
T Consensus 247 ~~~~~~v~~~d~-~g~~~~~i~~~~~~~~~~af~g~d~~~L~vt~~ 291 (326)
T 2ghs_A 247 RWGEGAVDRYDT-DGNHIARYEVPGKQTTCPAFIGPDASRLLVTSA 291 (326)
T ss_dssp EETTTEEEEECT-TCCEEEEEECSCSBEEEEEEESTTSCEEEEEEB
T ss_pred EeCCCEEEEECC-CCCEEEEEECCCCCcEEEEEecCCCCEEEEEec
Confidence 777789999998 677777777777789999998 88877777664
No 228
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=99.03 E-value=3.2e-11 Score=116.84 Aligned_cols=181 Identities=14% Similarity=0.048 Sum_probs=100.2
Q ss_pred CCCeEEEEECCCcEEEEECCCCeeeEEecCCCccEEEEEee--CCEEEEEeCCCcEEEEECCCCCccEEEeccccC-CeE
Q 014934 219 RNTHLAVGTSHGKVQIWDASRCKRVRTMEGHRLRVGALAWS--SSLLSSGSRDKSILQRDIRAQEDFVSKLSGHKS-EVC 295 (415)
Q Consensus 219 ~g~~la~g~~dg~V~iwd~~~~~~~~~l~~h~~~V~~l~~~--~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~-~V~ 295 (415)
++..+++++.||.|..||..+++.+-.+.. ..+.+..+. +..+++++.||.|+.||..+++. +..+..+.. .+.
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~--~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~-~w~~~~~~~~~~~ 84 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSIKWTLKE--DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEG-LTKLPFTIPELVQ 84 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCEEEEEEC--CCSCCCC-----CCEEECTTTCCEEEC-----CC-SEECSCCHHHHHT
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEecC--CCceecceEcCCCEEEEeCCCCEEEEEECCCCce-eeeeeccCccccc
Confidence 578899999999999999999998877765 333322222 45777778999999999987763 333332211 110
Q ss_pred -EEEEeCCCCEEEEEeCCCcEEEEECCCCceeEEeccCCCcEEEEEEcCCCCcEEEEEcCCCCCeEEEEECCCCcEEEEe
Q 014934 296 -GLKWSYDNRELASGGNDNRLFVWNQHSTQPVLKYCEHTAAVKAIAWSPHLHGLLASGGGTADRCIRFWNTTTNTHLSCM 374 (415)
Q Consensus 296 -~l~~spdg~~lasg~~dg~I~iwd~~~~~~~~~~~~h~~~V~~l~~sp~~~~llasggg~~d~~I~iwd~~t~~~~~~~ 374 (415)
+..+. ++..+++|+.|+.|+.||..+++.+.++..+. ...++|++..+++ ++ .|+.|+.||..+|+.+..+
T Consensus 85 ~sp~~~-~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~----~~~~~p~~~~v~~-~~--~dg~v~a~d~~tG~~~W~~ 156 (369)
T 2hz6_A 85 ASPCRS-SDGILYMGKKQDIWYVIDLLTGEKQQTLSSAF----ADSLSPSTSLLYL-GR--TEYTITMYDTKTRELRWNA 156 (369)
T ss_dssp TCSCC------CCCCEEEEEEEEECCC--------------------------EEE-EE--EEEEEECCCSSSSSCCCEE
T ss_pred cCceEe-cCCEEEEEeCCCEEEEEECCCCcEEEEecCCC----cccccccCCEEEE-Ee--cCCEEEEEECCCCCEEEeE
Confidence 01111 35577888889999999999999988876543 2456676664444 44 6899999999999877665
Q ss_pred eCCCCEEEEEECCCC---CeEEEEEecCCCcEEEEECCCCcc
Q 014934 375 DTGSQVCNLVWSKNV---NELVSTHGYSQNQIIVWRYPTMSK 413 (415)
Q Consensus 375 ~~~~~V~~l~~s~~~---~~l~s~~g~~dg~I~vw~~~s~~~ 413 (415)
.... .....++.+. ..+++ +..+|.|..||..+++.
T Consensus 157 ~~~~-~~~~~~~~~~~~~~~v~~--~~~dg~v~a~d~~tG~~ 195 (369)
T 2hz6_A 157 TYFD-YAASLPEDDVDYKMSHFV--SNGDGLVVTVDSESGDV 195 (369)
T ss_dssp EEEE-ECCBCCCCCTTCCCCEEE--EETSCEEEEECTTTCCE
T ss_pred eccc-ccCccccCCccccceEEE--ECCCCEEEEEECCCCcE
Confidence 4221 1223333332 44555 56789999999988764
No 229
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=99.03 E-value=1e-07 Score=86.49 Aligned_cols=188 Identities=13% Similarity=0.099 Sum_probs=133.5
Q ss_pred eEEeEecCCCCCeEEEEEcCCCCeEEEEECCC--cEEEEECCCCeeeEEecCCCcc-EEEEEeeCCEEEEE-eCCCcEEE
Q 014934 199 VTKLCDLGIDDSVCSVGWANRNTHLAVGTSHG--KVQIWDASRCKRVRTMEGHRLR-VGALAWSSSLLSSG-SRDKSILQ 274 (415)
Q Consensus 199 ~~~~~~~~~~~~V~~v~~sp~g~~la~g~~dg--~V~iwd~~~~~~~~~l~~h~~~-V~~l~~~~~~l~sg-s~dg~I~i 274 (415)
+++.+..+.......+.|+ ++.+..+.+.+| .|+++|+++++.+..+...... .-.++..++.|... -.++.+.+
T Consensus 33 vv~~~phd~~~ftqGL~~~-~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~~~FgeGit~~g~~ly~ltw~~~~v~v 111 (262)
T 3nol_A 33 IVHSYPHDTKAFTEGFFYR-NGYFYESTGLNGRSSIRKVDIESGKTLQQIELGKRYFGEGISDWKDKIVGLTWKNGLGFV 111 (262)
T ss_dssp EEEEEECCTTCEEEEEEEE-TTEEEEEEEETTEEEEEEECTTTCCEEEEEECCTTCCEEEEEEETTEEEEEESSSSEEEE
T ss_pred EEEEecCCCCcccceEEEE-CCEEEEECCCCCCceEEEEECCCCcEEEEEecCCccceeEEEEeCCEEEEEEeeCCEEEE
Confidence 4455543445556899998 666666666665 8999999999988887643332 23466666655555 46889999
Q ss_pred EECCCCCccEEEeccccCCeEEEEEeCCCCEEEEEeCCCcEEEEECCCCceeEEeccC--C---CcEEEEEEcCCCCcEE
Q 014934 275 RDIRAQEDFVSKLSGHKSEVCGLKWSYDNRELASGGNDNRLFVWNQHSTQPVLKYCEH--T---AAVKAIAWSPHLHGLL 349 (415)
Q Consensus 275 wd~~~~~~~~~~~~~h~~~V~~l~~spdg~~lasg~~dg~I~iwd~~~~~~~~~~~~h--~---~~V~~l~~sp~~~~ll 349 (415)
+|..+.+ .+..+... .+=.++ ++|++.|+.+..++.|.++|..+.+.+.++.-. . ..++.+.|. +|. ++
T Consensus 112 ~D~~t~~-~~~ti~~~-~eG~gl--t~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~-~G~-ly 185 (262)
T 3nol_A 112 WNIRNLR-QVRSFNYD-GEGWGL--THNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWV-DGE-IF 185 (262)
T ss_dssp EETTTCC-EEEEEECS-SCCCCE--EECSSCEEECCSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE-TTE-EE
T ss_pred EECccCc-EEEEEECC-CCceEE--ecCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEE-CCE-EE
Confidence 9999887 45555432 222333 456777777666889999999999888776532 1 345667887 554 77
Q ss_pred EEEcCCCCCeEEEEECCCCcEEEEeeCC-------------CCEEEEEECCCCCeEEEE
Q 014934 350 ASGGGTADRCIRFWNTTTNTHLSCMDTG-------------SQVCNLVWSKNVNELVST 395 (415)
Q Consensus 350 asggg~~d~~I~iwd~~t~~~~~~~~~~-------------~~V~~l~~s~~~~~l~s~ 395 (415)
+..- .+..|.+.|..+|+.+..++.. .-.++++|+|+++.|.++
T Consensus 186 an~w--~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVT 242 (262)
T 3nol_A 186 ANVW--QTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVT 242 (262)
T ss_dssp EEET--TSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEE
T ss_pred EEEc--cCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEE
Confidence 7664 6889999999999999988742 346889999998888876
No 230
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.00 E-value=4.7e-08 Score=94.37 Aligned_cols=212 Identities=10% Similarity=0.048 Sum_probs=144.3
Q ss_pred eeEeecCC-CcEEEEEc---CCeEEEEECCCCCeEEeEecCCCCCeEEEEEcCCCCeEEEEECCCcEEEEECCC-CeeeE
Q 014934 170 LNLVDWSS-HNVLAVGL---GNCVYLWNACSSKVTKLCDLGIDDSVCSVGWANRNTHLAVGTSHGKVQIWDASR-CKRVR 244 (415)
Q Consensus 170 i~~l~ws~-~~~la~~~---d~~V~iwd~~~~~~~~~~~~~~~~~V~~v~~sp~g~~la~g~~dg~V~iwd~~~-~~~~~ 244 (415)
...+.++| ++.|.++. ++.|.++|+.++++...+... + + ...+....+.+++.+.||.+.+.++.+ ++...
T Consensus 139 P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~v~--g-~-~~~~P~g~~~~~~~~~DG~~~~v~~~~~g~v~~ 214 (386)
T 3sjl_D 139 PWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVP--D-C-YHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEI 214 (386)
T ss_dssp GGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECC--S-E-EEEEEEETTEEEEEETTSCEEEEECCSSSCCEE
T ss_pred CceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEECC--C-c-ceeecCCCceeEEECCCCCEEEEECCCCCeEEE
Confidence 34578888 67666663 578999999999998888643 2 1 222333445677778899999999876 55432
Q ss_pred EecCCC----ccEE-EEEee--CCEEEEEeCCCcEEEEECCCCCc-cEEEec---------c-ccCCeEEEEEeCCCCEE
Q 014934 245 TMEGHR----LRVG-ALAWS--SSLLSSGSRDKSILQRDIRAQED-FVSKLS---------G-HKSEVCGLKWSYDNREL 306 (415)
Q Consensus 245 ~l~~h~----~~V~-~l~~~--~~~l~sgs~dg~I~iwd~~~~~~-~~~~~~---------~-h~~~V~~l~~spdg~~l 306 (415)
....+. ..+. ...|. ...++..+.+|.|++.|+..... ....+. + .......++++++++.|
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~dG~~~~vs~~g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~l 294 (386)
T 3sjl_D 215 THTEVFHPEDEFLINHPAYSQKAGRLVWPTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRI 294 (386)
T ss_dssp EECCCCSCTTSCBCSCCEEETTTTEEEEEBTTSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTEE
T ss_pred eecceeccccccccccceeEcCCCcEEEEeCCCEEEEEECCCCcceeecceeccccccccccccCCCcceeeECCCCCeE
Confidence 221111 1221 13453 23444466789999999976541 111111 0 12234457889999988
Q ss_pred EEEeC----------CCcEEEEECCCCceeEEeccCCCcEEEEEEcCCCC-cEEEEEcCCCCCeEEEEECCCCcEEEEee
Q 014934 307 ASGGN----------DNRLFVWNQHSTQPVLKYCEHTAAVKAIAWSPHLH-GLLASGGGTADRCIRFWNTTTNTHLSCMD 375 (415)
Q Consensus 307 asg~~----------dg~I~iwd~~~~~~~~~~~~h~~~V~~l~~sp~~~-~llasggg~~d~~I~iwd~~t~~~~~~~~ 375 (415)
..... .+.|.++|+.+++.+.++.. ...+..|+++++++ .|+++.. .++.|.++|..+++.+.++.
T Consensus 295 yV~~~~~~~~~hk~~~~~V~viD~~t~kv~~~i~v-g~~~~~lavs~D~~~~ly~tn~--~~~~VsViD~~t~k~~~~i~ 371 (386)
T 3sjl_D 295 YLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEM-GHEIDSINVSQDEKPLLYALST--GDKTLYIHDAESGEELRSVN 371 (386)
T ss_dssp EEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEE-EEEECEEEECSSSSCEEEEEET--TTTEEEEEETTTCCEEEEEC
T ss_pred EEEeccccccccCCCCCEEEEEECCCCeEEEEEEC-CCCcceEEECCCCCeEEEEEcC--CCCeEEEEECCCCcEEEEec
Confidence 87643 25799999999999888753 33678999999997 4566555 68999999999999999998
Q ss_pred CCCCEEEEEECCC
Q 014934 376 TGSQVCNLVWSKN 388 (415)
Q Consensus 376 ~~~~V~~l~~s~~ 388 (415)
....-..+.+++|
T Consensus 372 ~~~~p~~l~~s~d 384 (386)
T 3sjl_D 372 QLGHGPQVITTAD 384 (386)
T ss_dssp CCCSSCCEEEECC
T ss_pred CCCCCceeEECCc
Confidence 8777777777766
No 231
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=98.98 E-value=4.5e-07 Score=87.62 Aligned_cols=202 Identities=10% Similarity=-0.040 Sum_probs=131.8
Q ss_pred eEeecCC-CcEEEEEc---CCeEEEEECCCCCeEEe-EecCCCCCeEEEEEcCCC-CeEEEEECCCcEEEEECCCCeeeE
Q 014934 171 NLVDWSS-HNVLAVGL---GNCVYLWNACSSKVTKL-CDLGIDDSVCSVGWANRN-THLAVGTSHGKVQIWDASRCKRVR 244 (415)
Q Consensus 171 ~~l~ws~-~~~la~~~---d~~V~iwd~~~~~~~~~-~~~~~~~~V~~v~~sp~g-~~la~g~~dg~V~iwd~~~~~~~~ 244 (415)
..+.|+| ++.|.++. ++.|.++| .++++... +..+ . ++.+.|++ ..+++.+.||.+.++|. +++.+.
T Consensus 128 ~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~~~~~i~~~--~---~~~~~~~~~~~~~~~~~dg~~~~vd~-~g~~~~ 200 (373)
T 2mad_H 128 WMNANTPNNADLLFFQFAAGPAVGLVV-QGGSSDDQLLSSP--T---CYHIHPGAPSTFYLLCAQGGLAKTDH-AGGAAG 200 (373)
T ss_pred cceEECCCCCEEEEEecCCCCeEEEEE-CCCCEEeEEcCCC--c---eEEEEeCCCceEEEEcCCCCEEEEEC-CCcEEE
Confidence 4678999 77777663 36899999 99988766 5422 2 24455655 45566678999999999 777663
Q ss_pred Eec-----CCCccE-EEEEee--CCEEEEEeCCCcEEEEECCCCCc-cEEEecc----------ccCCeEEEEEeCCCCE
Q 014934 245 TME-----GHRLRV-GALAWS--SSLLSSGSRDKSILQRDIRAQED-FVSKLSG----------HKSEVCGLKWSYDNRE 305 (415)
Q Consensus 245 ~l~-----~h~~~V-~~l~~~--~~~l~sgs~dg~I~iwd~~~~~~-~~~~~~~----------h~~~V~~l~~spdg~~ 305 (415)
... ....++ ....+. +..++..+..+.+.+.|+..... ....+.- .......+.++|+++.
T Consensus 201 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~ 280 (373)
T 2mad_H 201 AGLVGAMLTAAQNLLTQPAQANKSGRIVWPVYSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDG 280 (373)
T ss_pred EEeccccccCCcceeecceeEecCCEEEEEcCCceEEEEeccCCcceEeeeeeecCCcccccceecCceEeEEECCCCCE
Confidence 321 111111 112222 33333334678999999975531 1122110 1122444788999988
Q ss_pred EEEEeC----------CCcEEEEECCCCceeEEeccCCCcEEEEEEcCCCCcEEEEEcCCCCCeEEEEECCCCcEEEE-e
Q 014934 306 LASGGN----------DNRLFVWNQHSTQPVLKYCEHTAAVKAIAWSPHLHGLLASGGGTADRCIRFWNTTTNTHLSC-M 374 (415)
Q Consensus 306 lasg~~----------dg~I~iwd~~~~~~~~~~~~h~~~V~~l~~sp~~~~llasggg~~d~~I~iwd~~t~~~~~~-~ 374 (415)
+.++.. ++.|.++|+.+.+.+.++. -.....+++|+|+|+.+++++.. .++.|.+||+.+++.+.. +
T Consensus 281 lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i~-~g~~p~~i~~s~Dg~~~l~v~~~-~~~~V~ViD~~t~~vv~~i~ 358 (373)
T 2mad_H 281 IYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQIS-LGHDVDAISVAQDGGPDLYALSA-GTEVLHIYDAGAGDQDQSTV 358 (373)
T ss_pred EEEEeccCCcccccCCCCeEEEEECCCCEEEEEEE-CCCCcCeEEECCCCCeEEEEEcC-CCCeEEEEECCCCCEEeeec
Confidence 877643 3579999999999988884 34468999999999844444431 489999999999999988 4
Q ss_pred eCCCCEE
Q 014934 375 DTGSQVC 381 (415)
Q Consensus 375 ~~~~~V~ 381 (415)
..+....
T Consensus 359 ~vG~~P~ 365 (373)
T 2mad_H 359 ELGSGPQ 365 (373)
T ss_pred CCCCCCc
Confidence 5554433
No 232
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=98.97 E-value=1.1e-07 Score=99.41 Aligned_cols=206 Identities=15% Similarity=0.106 Sum_probs=140.9
Q ss_pred CCeEEEEECCCCCeEEeEecCCC------------------------------CCeEEEEEcCCCCeEEEEECCCc----
Q 014934 186 GNCVYLWNACSSKVTKLCDLGID------------------------------DSVCSVGWANRNTHLAVGTSHGK---- 231 (415)
Q Consensus 186 d~~V~iwd~~~~~~~~~~~~~~~------------------------------~~V~~v~~sp~g~~la~g~~dg~---- 231 (415)
++.|+.||..+|+..-.+..... .....+++.|++.++++++.++.
T Consensus 182 ~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~w~~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~~ 261 (689)
T 1yiq_A 182 RGYVTAYDAETGKEAWRFYTVPGDPKLPPEGKGMEIAAKTWFGDAYVEQGGGGTAWDSFAYDPELNLLYIGVGNGSLWDP 261 (689)
T ss_dssp BCEEEEEETTTCCEEEEEESSCCCTTSCCCSHHHHHHHTTCCSSTHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCH
T ss_pred CCEEEEEECCCCcEEEEecccCCCcccccccccccccccccCCceeeecCCCCccccceeEcCCCCEEEEeCCCCCcccc
Confidence 57899999999998766542110 01125778888899999988764
Q ss_pred ---------------EEEEECCCCeeeEEecC--CC-------cc--EEEEEeeCC---EEEEEeCCCcEEEEECCCCCc
Q 014934 232 ---------------VQIWDASRCKRVRTMEG--HR-------LR--VGALAWSSS---LLSSGSRDKSILQRDIRAQED 282 (415)
Q Consensus 232 ---------------V~iwd~~~~~~~~~l~~--h~-------~~--V~~l~~~~~---~l~sgs~dg~I~iwd~~~~~~ 282 (415)
|..||..+++.+-.+.. |. .. +..+.+.+. .++.++.+|.++++|.++++.
T Consensus 262 ~~~~~~~gd~~y~~~v~AlD~~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~ 341 (689)
T 1yiq_A 262 KWRSQAKGDNLFLSSIVAVNADTGEYVWHYQTTPGDAWDYTATQHMILAELPIDGKPRKVLMQAPKNGFFYVIDRATGEL 341 (689)
T ss_dssp HHHHTTCSCCTTTTEEEEEETTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCE
T ss_pred CCCCCCCCCceeeeeEEEEEccCCceeEeeecCCcccccccCCCCcEEEeeccCCcEEEEEEEECCCCeEEEEECCCCCE
Confidence 99999999998876653 21 11 223334443 788999999999999998873
Q ss_pred cEEEeccc---------------------------c-----------CCeEEEEEeCCCCEEEEEeC-------------
Q 014934 283 FVSKLSGH---------------------------K-----------SEVCGLKWSYDNRELASGGN------------- 311 (415)
Q Consensus 283 ~~~~~~~h---------------------------~-----------~~V~~l~~spdg~~lasg~~------------- 311 (415)
....-... . ..-..++++|+..+|++..+
T Consensus 342 l~~~~~~~~~w~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~ 421 (689)
T 1yiq_A 342 LSAKGIVPQSWTKGMDMKTGRPILDEENAAYWKNGKRNLVTPAFWGAHDWQPMSYNPDTGLVYIPAHIMSAYYEHIPEAP 421 (689)
T ss_dssp EEEEESSCCSSEEEEETTTTEEEECHHHHCTTTSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEEECCSSCC
T ss_pred eccccccccccccccCccCCCcccchhhccccCCCCeeEeCCCcccccCCCcceECCCCCEEEEeccccceeeeeccccc
Confidence 21111000 0 01123788998888887632
Q ss_pred --------------------------------CCcEEEEECCCCceeEEeccCCCcEEEEEEcCCCCcEEEEEcCCCCCe
Q 014934 312 --------------------------------DNRLFVWNQHSTQPVLKYCEHTAAVKAIAWSPHLHGLLASGGGTADRC 359 (415)
Q Consensus 312 --------------------------------dg~I~iwd~~~~~~~~~~~~h~~~V~~l~~sp~~~~llasggg~~d~~ 359 (415)
+|.|..||+.+++.+.++..+.. +..-.+...+. +++.++ .|+.
T Consensus 422 ~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~~-~~~g~~~tagg-lvf~gt--~dg~ 497 (689)
T 1yiq_A 422 KRNPFKSMYQLGLRTGMMPEGAEGLLEMAKSWSGKLIAWDPVKQQAAWEVPYVTI-FNGGTLSTAGN-LVFEGS--ADGR 497 (689)
T ss_dssp CCCSCTTSCCCSSEECCCCSSHHHHHHHHTTCEEEEEEEETTTTEEEEEEEESSS-CCCCEEEETTT-EEEEEC--TTSE
T ss_pred cccccccccccCccccccCcccccCCCCCCCcceeEEEEECCCCCeEeEccCCCC-ccCccceECCC-EEEEEC--CCCc
Confidence 37799999999999988865542 33334455554 666665 8999
Q ss_pred EEEEECCCCcEEEEeeCCCCE--EEEEECCCCCeEEEE
Q 014934 360 IRFWNTTTNTHLSCMDTGSQV--CNLVWSKNVNELVST 395 (415)
Q Consensus 360 I~iwd~~t~~~~~~~~~~~~V--~~l~~s~~~~~l~s~ 395 (415)
|+.||..+|+.+..+..+..+ .-+.|..+|+..++.
T Consensus 498 l~a~D~~tG~~lw~~~~~~~~~~~p~ty~~~G~qyv~~ 535 (689)
T 1yiq_A 498 VIAYAADTGEKLWEQPAASGVMAAPVTYSVDGEQYVTF 535 (689)
T ss_dssp EEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEEE
T ss_pred EEEEECCCCccceeeeCCCCcccCceEEEECCEEEEEE
Confidence 999999999999988755332 347778888866553
No 233
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.96 E-value=4.5e-07 Score=81.51 Aligned_cols=193 Identities=12% Similarity=0.069 Sum_probs=135.3
Q ss_pred CceeccCCCCCCCcceeEeecCCCcEEEEEcC---CeEEEEECCCCCeEEeEecCCCCCeEEEEEcCCCCeEEEE-ECCC
Q 014934 155 PYKILDAPALQDDFYLNLVDWSSHNVLAVGLG---NCVYLWNACSSKVTKLCDLGIDDSVCSVGWANRNTHLAVG-TSHG 230 (415)
Q Consensus 155 p~~~ld~~~l~~~~~i~~l~ws~~~~la~~~d---~~V~iwd~~~~~~~~~~~~~~~~~V~~v~~sp~g~~la~g-~~dg 230 (415)
.++++..-.....-+...+.|+++.+..++.. +.|+.+|+.++++.....+.. ..........++.|... -.++
T Consensus 8 ~~~v~~~~phd~~~ftqGL~~~~~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~--~~fgeGi~~~~~~ly~ltw~~~ 85 (243)
T 3mbr_X 8 GYRVVKRYPHDTTAFTEGLFYLRGHLYESTGETGRSSVRKVDLETGRILQRAEVPP--PYFGAGIVAWRDRLIQLTWRNH 85 (243)
T ss_dssp CEEEEEEEECCTTCCEEEEEEETTEEEEEECCTTSCEEEEEETTTCCEEEEEECCT--TCCEEEEEEETTEEEEEESSSS
T ss_pred ceEEEEEcCCCCccccccEEEECCEEEEECCCCCCceEEEEECCCCCEEEEEeCCC--CcceeEEEEeCCEEEEEEeeCC
Confidence 34454442233345677888888654444432 489999999999998887653 23333333345555554 4588
Q ss_pred cEEEEECCCCeeeEEecCCCccEEEEEeeCCEEEEEeCCCcEEEEECCCCCccEEEecccc-----CCeEEEEEeCCCCE
Q 014934 231 KVQIWDASRCKRVRTMEGHRLRVGALAWSSSLLSSGSRDKSILQRDIRAQEDFVSKLSGHK-----SEVCGLKWSYDNRE 305 (415)
Q Consensus 231 ~V~iwd~~~~~~~~~l~~h~~~V~~l~~~~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~-----~~V~~l~~spdg~~ 305 (415)
.+.+||..+.+.+.++.... .-..+++.+..|+.+..++.|.++|..+.+ .+..+.-.. ..++.|.|. +|+.
T Consensus 86 ~v~v~D~~tl~~~~ti~~~~-~Gwglt~dg~~L~vSdgs~~l~~iDp~t~~-~~~~I~V~~~g~~~~~lNeLe~~-~G~l 162 (243)
T 3mbr_X 86 EGFVYDLATLTPRARFRYPG-EGWALTSDDSHLYMSDGTAVIRKLDPDTLQ-QVGSIKVTAGGRPLDNLNELEWV-NGEL 162 (243)
T ss_dssp EEEEEETTTTEEEEEEECSS-CCCEEEECSSCEEEECSSSEEEEECTTTCC-EEEEEECEETTEECCCEEEEEEE-TTEE
T ss_pred EEEEEECCcCcEEEEEeCCC-CceEEeeCCCEEEEECCCCeEEEEeCCCCe-EEEEEEEccCCcccccceeeEEe-CCEE
Confidence 99999999999999887433 345777877777777778999999999876 344443211 345677776 7777
Q ss_pred EEEEeCCCcEEEEECCCCceeEEeccC-------------CCcEEEEEEcCCCCcEEEEE
Q 014934 306 LASGGNDNRLFVWNQHSTQPVLKYCEH-------------TAAVKAIAWSPHLHGLLASG 352 (415)
Q Consensus 306 lasg~~dg~I~iwd~~~~~~~~~~~~h-------------~~~V~~l~~sp~~~~llasg 352 (415)
+|..-.++.|.+.|.++++.+..+.-. ..-.+.|||+|+++.|+++|
T Consensus 163 yanvw~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTG 222 (243)
T 3mbr_X 163 LANVWLTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTG 222 (243)
T ss_dssp EEEETTTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEE
T ss_pred EEEECCCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEEC
Confidence 766667889999999999988877521 12468999999999899988
No 234
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=98.95 E-value=7.7e-08 Score=91.75 Aligned_cols=197 Identities=9% Similarity=-0.055 Sum_probs=129.0
Q ss_pred CCeEEEEEcCCCCeEEEEE--CCCcEEEEECCCCeeeEEec-------CCCccEEEEEeeC-CEEEEEeC------CCcE
Q 014934 209 DSVCSVGWANRNTHLAVGT--SHGKVQIWDASRCKRVRTME-------GHRLRVGALAWSS-SLLSSGSR------DKSI 272 (415)
Q Consensus 209 ~~V~~v~~sp~g~~la~g~--~dg~V~iwd~~~~~~~~~l~-------~h~~~V~~l~~~~-~~l~sgs~------dg~I 272 (415)
..+..|+++++|+.+++.. .+|.++||.+.+++. ..+. .|...+.++++++ ..|+.... ++.|
T Consensus 17 ~~p~~va~~~~g~~~v~~~~~~~~~~~l~~~~~g~~-~~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i 95 (343)
T 2qe8_A 17 LAPGNITLTPDGRLFLSLHQFYQPEMQVAELTQDGL-IPFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQSKSVPKL 95 (343)
T ss_dssp SCEEEEEECTTSCEEEEECGGGCCSCSEEEEETTEE-EESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHHHHTSCCEE
T ss_pred CCcceEEECCCCCEEEEeCCCCCCceEEEEECCCCe-ecCCCcccCcccceeEeeEEEEcCCCcEEEEcCCCCcCCCCeE
Confidence 6899999999999888764 234355555545543 3231 3456899999984 44555443 5789
Q ss_pred EEEECCCCCccEEEecc------ccCCeEEEEEeCCCCEE-EEEe---CCCcEEEEECCCCceeEEeccCC---------
Q 014934 273 LQRDIRAQEDFVSKLSG------HKSEVCGLKWSYDNREL-ASGG---NDNRLFVWNQHSTQPVLKYCEHT--------- 333 (415)
Q Consensus 273 ~iwd~~~~~~~~~~~~~------h~~~V~~l~~spdg~~l-asg~---~dg~I~iwd~~~~~~~~~~~~h~--------- 333 (415)
.+||+.+++ .+..+.. +...+..+++++++..+ ++.. .++.|.+||+.+++....+.+|.
T Consensus 96 ~~~d~~tg~-~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~ 174 (343)
T 2qe8_A 96 VAWDTLNNQ-LSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQGYPGIAPEDIDL 174 (343)
T ss_dssp EEEETTTTE-EEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECTTCTTTSCCSCCC
T ss_pred EEEECCCCe-EEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEecCCCcccccccce
Confidence 999998776 3343332 22356899999865454 5544 57899999998887665553321
Q ss_pred --------------------CcEEEEEEcCCCCcEEEEEcCCCCCeEEEEECC---CCc--------EEEEeeCCCCEEE
Q 014934 334 --------------------AAVKAIAWSPHLHGLLASGGGTADRCIRFWNTT---TNT--------HLSCMDTGSQVCN 382 (415)
Q Consensus 334 --------------------~~V~~l~~sp~~~~llasggg~~d~~I~iwd~~---t~~--------~~~~~~~~~~V~~ 382 (415)
..+..|+|+|+++.|+++.. ....|..++.. .+. .+...........
T Consensus 175 ~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~--~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~pdg 252 (343)
T 2qe8_A 175 VIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPM--HSTSMYRIKSADLSNLQLTDAELGSKIERYSEKPICDG 252 (343)
T ss_dssp EETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEES--SCSEEEEEEHHHHTCTTCCHHHHHTTCEEEEECCSCSC
T ss_pred eECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeC--CCCeEEEEEHHHhcCCCCChhhhhcceEecccCCCCce
Confidence 23688999999987777654 34456555532 111 0112222335667
Q ss_pred EEECCCCCeEEEEEecCCCcEEEEECCCC
Q 014934 383 LVWSKNVNELVSTHGYSQNQIIVWRYPTM 411 (415)
Q Consensus 383 l~~s~~~~~l~s~~g~~dg~I~vw~~~s~ 411 (415)
++++++|+.+++ ...++.|.+|+..++
T Consensus 253 ia~d~~G~l~va--~~~~~~V~~~d~~~G 279 (343)
T 2qe8_A 253 ISIDKDHNIYVG--DLAHSAIGVITSADR 279 (343)
T ss_dssp EEECTTCCEEEE--EGGGTEEEEEETTTT
T ss_pred EEECCCCCEEEE--ccCCCeEEEEECCCC
Confidence 999999988777 667889999997443
No 235
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=98.94 E-value=1.9e-07 Score=97.43 Aligned_cols=219 Identities=11% Similarity=0.110 Sum_probs=150.1
Q ss_pred CCeEEEEECCCCCeEEeEecCCCC-------------------------------CeEEEEEcCCCCeEEEEECCC----
Q 014934 186 GNCVYLWNACSSKVTKLCDLGIDD-------------------------------SVCSVGWANRNTHLAVGTSHG---- 230 (415)
Q Consensus 186 d~~V~iwd~~~~~~~~~~~~~~~~-------------------------------~V~~v~~sp~g~~la~g~~dg---- 230 (415)
++.|+.||..+|+..-.+...... ....+++++++..+.+++.++
T Consensus 189 ~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~~~~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~ 268 (677)
T 1kb0_A 189 RGYITAYDAETGERKWRWFSVPGDPSKPFEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWS 268 (677)
T ss_dssp BCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSC
T ss_pred CCEEEEEECCCCcEEEEeccCCCCccccccccccccccccccccCceeEeCCCcccccceeEcCCCCEEEEECCCCcccc
Confidence 588999999999987766542211 113567888899898887764
Q ss_pred ---------------cEEEEECCCCeeeEEecC--CC--------cc-EEEEEeeC---CEEEEEeCCCcEEEEECCCCC
Q 014934 231 ---------------KVQIWDASRCKRVRTMEG--HR--------LR-VGALAWSS---SLLSSGSRDKSILQRDIRAQE 281 (415)
Q Consensus 231 ---------------~V~iwd~~~~~~~~~l~~--h~--------~~-V~~l~~~~---~~l~sgs~dg~I~iwd~~~~~ 281 (415)
.|..+|..+++.+-.+.. |. .+ +..+...+ ..++.++.+|.|+++|.++++
T Consensus 269 ~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~~~~~~~d~wd~~~~~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~ 348 (677)
T 1kb0_A 269 HKVRSPKGGDNLYLASIVALDPDTGKYKWHYQETPGDNWDYTSTQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTNGK 348 (677)
T ss_dssp HHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCCEEEEEEETTEEEEEEEECCTTSEEEEEETTTCC
T ss_pred CCCCCccCCCCeeeEEEEEEECCCCCEEEEEecCCCcccccccCCCcEEEecccCCcEeeEEEEECCCCEEEEEECCCCC
Confidence 499999999998766543 21 11 22233344 678999999999999999887
Q ss_pred ccEEEecccc-----------CCe------------------------EEEEEeCCCCEEEEEeCC--------------
Q 014934 282 DFVSKLSGHK-----------SEV------------------------CGLKWSYDNRELASGGND-------------- 312 (415)
Q Consensus 282 ~~~~~~~~h~-----------~~V------------------------~~l~~spdg~~lasg~~d-------------- 312 (415)
. +....... ..+ ..++++|++.++++...+
T Consensus 349 ~-l~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~g 427 (677)
T 1kb0_A 349 F-ISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQTGLVYLPAQNVPVNLMDDKKWEFN 427 (677)
T ss_dssp E-EEEEESSCCSSEEEECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTTTEEEEEEEECCCEEEECTTCCTT
T ss_pred E-eccccccccCcccccCCCCceeeccccCcCCCccEECcCcccccCCCCceEcCCCCEEEEeChhcceeeecccccccc
Confidence 3 33222110 001 157889998888876432
Q ss_pred -----------------------------CcEEEEECCCCceeEEeccCCCcEEEEEEcCCCCcEEEEEcCCCCCeEEEE
Q 014934 313 -----------------------------NRLFVWNQHSTQPVLKYCEHTAAVKAIAWSPHLHGLLASGGGTADRCIRFW 363 (415)
Q Consensus 313 -----------------------------g~I~iwd~~~~~~~~~~~~h~~~V~~l~~sp~~~~llasggg~~d~~I~iw 363 (415)
|.|..||+.+++.+.++. +...+....+...+. +++.++ .|+.+++|
T Consensus 428 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~-~~~~~~~g~~~~~g~-~v~~g~--~dg~l~a~ 503 (677)
T 1kb0_A 428 QAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVAQKAAWSVE-HVSPWNGGTLTTAGN-VVFQGT--ADGRLVAY 503 (677)
T ss_dssp CCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETTTTEEEEEEE-ESSSCCCCEEEETTT-EEEEEC--TTSEEEEE
T ss_pred cccccccccccccccccccccccCCCCCccEEEEEeCCCCcEEeecC-CCCCCcCcceEeCCC-EEEEEC--CCCcEEEE
Confidence 789999999999988875 333444455566665 455554 89999999
Q ss_pred ECCCCcEEEEeeCCCC--EEEEEECCCCCeEEEE-Eec--------------CCCcEEEEECC
Q 014934 364 NTTTNTHLSCMDTGSQ--VCNLVWSKNVNELVST-HGY--------------SQNQIIVWRYP 409 (415)
Q Consensus 364 d~~t~~~~~~~~~~~~--V~~l~~s~~~~~l~s~-~g~--------------~dg~I~vw~~~ 409 (415)
|..+|+.+..+..+.. ..-+.|..+|+.+++. .|. ..+.+.+|.++
T Consensus 504 D~~tG~~lw~~~~~~~~~~~p~~y~~~G~~~v~~~~G~~~~~~~~~~~~~~~~~~~l~~f~l~ 566 (677)
T 1kb0_A 504 HAATGEKLWEAPTGTGVVAAPSTYMVDGRQYVSVAVGWGGVYGLAARATERQGPGTVYTFVVG 566 (677)
T ss_dssp ETTTCCEEEEEECSSCCCSCCEEEEETTEEEEEEEECCCHHHHHHCCSCSCCCCCEEEEEEET
T ss_pred ECCCCceeeeeeCCCCcccCCEEEEeCCEEEEEEeccCCccccccccccccCCCCeEEEEecc
Confidence 9999999999875443 3346677888755543 231 03678888876
No 236
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.93 E-value=2.4e-07 Score=84.17 Aligned_cols=189 Identities=10% Similarity=0.019 Sum_probs=134.0
Q ss_pred CeEEeEecCCCCCeEEEEEcCCCCeEEEEECCCcEEEEECCCCeeeEEecCCCc-cEEEEEeeC-CEEEEEeCCCcEEEE
Q 014934 198 KVTKLCDLGIDDSVCSVGWANRNTHLAVGTSHGKVQIWDASRCKRVRTMEGHRL-RVGALAWSS-SLLSSGSRDKSILQR 275 (415)
Q Consensus 198 ~~~~~~~~~~~~~V~~v~~sp~g~~la~g~~dg~V~iwd~~~~~~~~~l~~h~~-~V~~l~~~~-~~l~sgs~dg~I~iw 275 (415)
+++..+..+.......+.|+ ++.+..+.+.+|.|+++|+++++.+..+ -... ..-.++..+ .+.+..-.++.+.+|
T Consensus 44 ~Vv~~~phd~~~ftqGL~~~-~~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l~~~~FgeGit~~g~~Ly~ltw~~~~v~V~ 121 (268)
T 3nok_A 44 HIIREYPHATNAFTQGLVFH-QGHFFESTGHQGTLRQLSLESAQPVWME-RLGNIFAEGLASDGERLYQLTWTEGLLFTW 121 (268)
T ss_dssp EEEEEEECCTTCCEEEEEEE-TTEEEEEETTTTEEEECCSSCSSCSEEE-ECTTCCEEEEEECSSCEEEEESSSCEEEEE
T ss_pred EEEEEEcCCCccccceEEEE-CCEEEEEcCCCCEEEEEECCCCcEEeEE-CCCCcceeEEEEeCCEEEEEEccCCEEEEE
Confidence 34455544445667889987 4556666677889999999999888776 2222 123466665 455555578999999
Q ss_pred ECCCCCccEEEeccccCCeEEEEEeCCCCEEEEEeCCCcEEEEECCCCceeEEeccCC-----CcEEEEEEcCCCCcEEE
Q 014934 276 DIRAQEDFVSKLSGHKSEVCGLKWSYDNRELASGGNDNRLFVWNQHSTQPVLKYCEHT-----AAVKAIAWSPHLHGLLA 350 (415)
Q Consensus 276 d~~~~~~~~~~~~~h~~~V~~l~~spdg~~lasg~~dg~I~iwd~~~~~~~~~~~~h~-----~~V~~l~~sp~~~~lla 350 (415)
|..+.+ .+..+.. ..+-.+++ +|++.|+.+..++.|.++|..+.+.+.++.-.. ..++.+.|. +| .+++
T Consensus 122 D~~Tl~-~~~ti~~-~~eGwGLt--~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~-dG-~lya 195 (268)
T 3nok_A 122 SGMPPQ-RERTTRY-SGEGWGLC--YWNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECA-NG-VIYA 195 (268)
T ss_dssp ETTTTE-EEEEEEC-SSCCCCEE--EETTEEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TT-EEEE
T ss_pred ECCcCc-EEEEEeC-CCceeEEe--cCCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEe-CC-EEEE
Confidence 999887 4555543 23334444 567888887779999999999998887765321 245778887 55 4777
Q ss_pred EEcCCCCCeEEEEECCCCcEEEEeeCC--------------CCEEEEEECCCCCeEEEEEe
Q 014934 351 SGGGTADRCIRFWNTTTNTHLSCMDTG--------------SQVCNLVWSKNVNELVSTHG 397 (415)
Q Consensus 351 sggg~~d~~I~iwd~~t~~~~~~~~~~--------------~~V~~l~~s~~~~~l~s~~g 397 (415)
..- .+..|.+.|..+|+.+..++.. .-.++++|+|+++.|+++ |
T Consensus 196 nvw--~s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVT-G 253 (268)
T 3nok_A 196 NIW--HSSDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMT-G 253 (268)
T ss_dssp EET--TCSEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEE-E
T ss_pred EEC--CCCeEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEe-C
Confidence 664 6789999999999999988732 346889999988777775 5
No 237
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=98.93 E-value=1.2e-07 Score=88.61 Aligned_cols=188 Identities=12% Similarity=0.053 Sum_probs=127.7
Q ss_pred CCCeEEEEEcCCCC-eEEEEECCCcEEEEECCCCeeeEEecCCCccEEEEEee--CCEEEEEeCCCcEEEEECCCCCccE
Q 014934 208 DDSVCSVGWANRNT-HLAVGTSHGKVQIWDASRCKRVRTMEGHRLRVGALAWS--SSLLSSGSRDKSILQRDIRAQEDFV 284 (415)
Q Consensus 208 ~~~V~~v~~sp~g~-~la~g~~dg~V~iwd~~~~~~~~~l~~h~~~V~~l~~~--~~~l~sgs~dg~I~iwd~~~~~~~~ 284 (415)
.....+..|+++|+ +++++..++.|..|+. +++ +..+..+...+..++++ ++++++...++.|.+||.. +. .
T Consensus 44 ~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~-~g~-~~~~~~~~~~~~gl~~d~dG~l~v~~~~~~~v~~~~~~-g~--~ 118 (305)
T 3dr2_A 44 ATWSEGPAWWEAQRTLVWSDLVGRRVLGWRE-DGT-VDVLLDATAFTNGNAVDAQQRLVHCEHGRRAITRSDAD-GQ--A 118 (305)
T ss_dssp CSSEEEEEEEGGGTEEEEEETTTTEEEEEET-TSC-EEEEEESCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SC--E
T ss_pred CcCccCCeEeCCCCEEEEEECCCCEEEEEeC-CCC-EEEEeCCCCccceeeECCCCCEEEEECCCCEEEEECCC-CC--E
Confidence 45678899999998 6666777889999998 444 34555566778899998 4555554456789999986 33 2
Q ss_pred EEeccc-----cCCeEEEEEeCCCCEEEE----EeC-------------CCcEEEEECCCCceeEEeccCCCcEEEEEEc
Q 014934 285 SKLSGH-----KSEVCGLKWSYDNRELAS----GGN-------------DNRLFVWNQHSTQPVLKYCEHTAAVKAIAWS 342 (415)
Q Consensus 285 ~~~~~h-----~~~V~~l~~spdg~~las----g~~-------------dg~I~iwd~~~~~~~~~~~~h~~~V~~l~~s 342 (415)
..+..+ ...+..++++++|+++++ |.. .+.|+.||..+++..... .......++|+
T Consensus 119 ~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~--~~~~p~gl~~s 196 (305)
T 3dr2_A 119 HLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA--DLDHPNGLAFS 196 (305)
T ss_dssp EEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE--EESSEEEEEEC
T ss_pred EEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe--cCCCCcceEEc
Confidence 222211 134678999999998886 332 256888888777654333 44567889999
Q ss_pred CCCCcEEEEEcCCC-----CCeEEEEECCCCcEEEE---ee--CCCCEEEEEECCCCCeEEEEEecCCCcEEEEECC
Q 014934 343 PHLHGLLASGGGTA-----DRCIRFWNTTTNTHLSC---MD--TGSQVCNLVWSKNVNELVSTHGYSQNQIIVWRYP 409 (415)
Q Consensus 343 p~~~~llasggg~~-----d~~I~iwd~~t~~~~~~---~~--~~~~V~~l~~s~~~~~l~s~~g~~dg~I~vw~~~ 409 (415)
|+++.|+++.. . .+.|.+|++..+. +.. +. ......++.++++|+..++ .. +.|.+|+..
T Consensus 197 pdg~~lyv~~~--~~~~~~~~~i~~~~~~~~~-l~~~~~~~~~~~~~pdgi~~d~~G~lwv~---~~-~gv~~~~~~ 266 (305)
T 3dr2_A 197 PDEQTLYVSQT--PEQGHGSVEITAFAWRDGA-LHDRRHFASVPDGLPDGFCVDRGGWLWSS---SG-TGVCVFDSD 266 (305)
T ss_dssp TTSSEEEEEEC--CC---CCCEEEEEEEETTE-EEEEEEEECCSSSCCCSEEECTTSCEEEC---CS-SEEEEECTT
T ss_pred CCCCEEEEEec--CCcCCCCCEEEEEEecCCC-ccCCeEEEECCCCCCCeEEECCCCCEEEe---cC-CcEEEECCC
Confidence 99987777654 2 3789999987654 211 11 1334567899999995554 23 358888863
No 238
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=98.93 E-value=4.3e-07 Score=87.29 Aligned_cols=223 Identities=12% Similarity=-0.006 Sum_probs=143.5
Q ss_pred CCCcEEEEEcCCeEEEEECCCCCeEEeEecCCCCCeEEEEEcCCCCeEEEEECCCcEEEEECCCCeeeEEecCCCccE--
Q 014934 176 SSHNVLAVGLGNCVYLWNACSSKVTKLCDLGIDDSVCSVGWANRNTHLAVGTSHGKVQIWDASRCKRVRTMEGHRLRV-- 253 (415)
Q Consensus 176 s~~~~la~~~d~~V~iwd~~~~~~~~~~~~~~~~~V~~v~~sp~g~~la~g~~dg~V~iwd~~~~~~~~~l~~h~~~V-- 253 (415)
..+.+++.+.++.|+.+|..+++..-...... ........ .+..+++++.+|.|..+|..+++.+-.+.......
T Consensus 102 ~~~~v~v~~~~g~l~a~d~~tG~~~W~~~~~~-~~~~~p~~--~~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~~ 178 (376)
T 3q7m_A 102 SGGHVYIGSEKAQVYALNTSDGTVAWQTKVAG-EALSRPVV--SDGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSL 178 (376)
T ss_dssp ETTEEEEEETTSEEEEEETTTCCEEEEEECSS-CCCSCCEE--ETTEEEEECTTSEEEEEETTTCCEEEEEECCC-----
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEEeCCC-ceEcCCEE--ECCEEEEEcCCCeEEEEECCCCcEEEEEeCCCCceee
Confidence 34556666678999999999999876665432 11111111 24578888999999999999998776665332211
Q ss_pred ---EEEEeeCCEEEEEeCCCcEEEEECCCCCccEEEecccc--C--CeEE---EEEeC--CCCEEEEEeCCCcEEEEECC
Q 014934 254 ---GALAWSSSLLSSGSRDKSILQRDIRAQEDFVSKLSGHK--S--EVCG---LKWSY--DNRELASGGNDNRLFVWNQH 321 (415)
Q Consensus 254 ---~~l~~~~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~--~--~V~~---l~~sp--dg~~lasg~~dg~I~iwd~~ 321 (415)
......+..++.++.++.|..+|..+++. +....... . ++.. +...| .+..+..++.++.|..+|..
T Consensus 179 ~~~~~~~~~~~~v~~g~~~g~l~~~d~~tG~~-~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~~g~l~~~d~~ 257 (376)
T 3q7m_A 179 RGESAPTTAFGAAVVGGDNGRVSAVLMEQGQM-IWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAYNGNLTALDLR 257 (376)
T ss_dssp CCCCCCEEETTEEEECCTTTEEEEEETTTCCE-EEEEECCC-----------CCCCCCEEETTEEEEECTTSCEEEEETT
T ss_pred cCCCCcEEECCEEEEEcCCCEEEEEECCCCcE-EEEEecccCCCCcccccccccCCCcEEECCEEEEEecCcEEEEEECC
Confidence 22233467888899999999999988873 32222110 0 0000 00111 35677888889999999999
Q ss_pred CCceeEEeccCCCcEEEEEEcCCCCcEEEEEcCCCCCeEEEEECCCCcEEEEee-CC-CCEEEEEECCCCCeEEEEEecC
Q 014934 322 STQPVLKYCEHTAAVKAIAWSPHLHGLLASGGGTADRCIRFWNTTTNTHLSCMD-TG-SQVCNLVWSKNVNELVSTHGYS 399 (415)
Q Consensus 322 ~~~~~~~~~~h~~~V~~l~~sp~~~~llasggg~~d~~I~iwd~~t~~~~~~~~-~~-~~V~~l~~s~~~~~l~s~~g~~ 399 (415)
+++.+..... .....+... +..+++.. .++.|..+|..+|+.+.... .. ..+..... .+..|++ +..
T Consensus 258 tG~~~w~~~~--~~~~~~~~~--~~~l~~~~---~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~--~~~~l~v--~~~ 326 (376)
T 3q7m_A 258 SGQIMWKREL--GSVNDFIVD--GNRIYLVD---QNDRVMALTIDGGVTLWTQSDLLHRLLTSPVL--YNGNLVV--GDS 326 (376)
T ss_dssp TCCEEEEECC--CCEEEEEEE--TTEEEEEE---TTCCEEEEETTTCCEEEEECTTTTSCCCCCEE--ETTEEEE--ECT
T ss_pred CCcEEeeccC--CCCCCceEE--CCEEEEEc---CCCeEEEEECCCCcEEEeecccCCCcccCCEE--ECCEEEE--EeC
Confidence 9998877642 334445443 34466654 58899999999999887765 21 12222222 2456666 667
Q ss_pred CCcEEEEECCCCcc
Q 014934 400 QNQIIVWRYPTMSK 413 (415)
Q Consensus 400 dg~I~vw~~~s~~~ 413 (415)
+|.|.++|..+++.
T Consensus 327 ~g~l~~~d~~tG~~ 340 (376)
T 3q7m_A 327 EGYLHWINVEDGRF 340 (376)
T ss_dssp TSEEEEEETTTCCE
T ss_pred CCeEEEEECCCCcE
Confidence 89999999888764
No 239
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.89 E-value=8.3e-07 Score=79.80 Aligned_cols=189 Identities=11% Similarity=0.045 Sum_probs=131.6
Q ss_pred CeEEeEecCCCCCeEEEEEcCCCCeEEEEECC--CcEEEEECCCCeeeEEecCCCcc-EEEEEeeCCE-EEEEeCCCcEE
Q 014934 198 KVTKLCDLGIDDSVCSVGWANRNTHLAVGTSH--GKVQIWDASRCKRVRTMEGHRLR-VGALAWSSSL-LSSGSRDKSIL 273 (415)
Q Consensus 198 ~~~~~~~~~~~~~V~~v~~sp~g~~la~g~~d--g~V~iwd~~~~~~~~~l~~h~~~-V~~l~~~~~~-l~sgs~dg~I~ 273 (415)
+++..+..........+.|+. +.+..+.+.. ..|+.+|+.+++.+..+...... --.++..++. ....-.++.+.
T Consensus 10 ~v~~~~phd~~~ftqGL~~~~-~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~~~~ly~ltw~~~~v~ 88 (243)
T 3mbr_X 10 RVVKRYPHDTTAFTEGLFYLR-GHLYESTGETGRSSVRKVDLETGRILQRAEVPPPYFGAGIVAWRDRLIQLTWRNHEGF 88 (243)
T ss_dssp EEEEEEECCTTCCEEEEEEET-TEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEESSSSEEE
T ss_pred EEEEEcCCCCccccccEEEEC-CEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCcceeEEEEeCCEEEEEEeeCCEEE
Confidence 344555444456788999986 5544544444 48999999999988877633222 2345555554 44555789999
Q ss_pred EEECCCCCccEEEeccccCCeEEEEEeCCCCEEEEEeCCCcEEEEECCCCceeEEeccCC-----CcEEEEEEcCCCCcE
Q 014934 274 QRDIRAQEDFVSKLSGHKSEVCGLKWSYDNRELASGGNDNRLFVWNQHSTQPVLKYCEHT-----AAVKAIAWSPHLHGL 348 (415)
Q Consensus 274 iwd~~~~~~~~~~~~~h~~~V~~l~~spdg~~lasg~~dg~I~iwd~~~~~~~~~~~~h~-----~~V~~l~~sp~~~~l 348 (415)
++|..+.+ .+..+... .+-.+++ ++++.|+.+..++.|.++|..+.+.+.++.-.. ..++.+.|. +|. +
T Consensus 89 v~D~~tl~-~~~ti~~~-~~Gwglt--~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~-~G~-l 162 (243)
T 3mbr_X 89 VYDLATLT-PRARFRYP-GEGWALT--SDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWV-NGE-L 162 (243)
T ss_dssp EEETTTTE-EEEEEECS-SCCCEEE--ECSSCEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTE-E
T ss_pred EEECCcCc-EEEEEeCC-CCceEEe--eCCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEe-CCE-E
Confidence 99999887 45555532 2334454 567777777778999999999998887775321 345677776 444 7
Q ss_pred EEEEcCCCCCeEEEEECCCCcEEEEeeCC--------------CCEEEEEECCCCCeEEEE
Q 014934 349 LASGGGTADRCIRFWNTTTNTHLSCMDTG--------------SQVCNLVWSKNVNELVST 395 (415)
Q Consensus 349 lasggg~~d~~I~iwd~~t~~~~~~~~~~--------------~~V~~l~~s~~~~~l~s~ 395 (415)
++..- .+..|.+.|..+|+.+..++.. .-.++++|+|+++.|.++
T Consensus 163 yanvw--~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVT 221 (243)
T 3mbr_X 163 LANVW--LTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVT 221 (243)
T ss_dssp EEEET--TTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEE
T ss_pred EEEEC--CCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEE
Confidence 77664 5789999999999999988722 246789999998888776
No 240
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.89 E-value=3.8e-07 Score=82.81 Aligned_cols=180 Identities=10% Similarity=0.002 Sum_probs=130.2
Q ss_pred CcceeEeecCCCcEEEEE-cCCeEEEEECCCCCeEEeEecCCCCCeEEEEEcCCCCeEEEE-ECCCcEEEEECCCCeeeE
Q 014934 167 DFYLNLVDWSSHNVLAVG-LGNCVYLWNACSSKVTKLCDLGIDDSVCSVGWANRNTHLAVG-TSHGKVQIWDASRCKRVR 244 (415)
Q Consensus 167 ~~~i~~l~ws~~~~la~~-~d~~V~iwd~~~~~~~~~~~~~~~~~V~~v~~sp~g~~la~g-~~dg~V~iwd~~~~~~~~ 244 (415)
.-+...|.|+.+.+..+. .++.|+++|+.++++.... ++..-.--.+++ +++.|... -.++.+.+||..+.+.+.
T Consensus 54 ~~ftqGL~~~~~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l~~~~FgeGit~--~g~~Ly~ltw~~~~v~V~D~~Tl~~~~ 130 (268)
T 3nok_A 54 NAFTQGLVFHQGHFFESTGHQGTLRQLSLESAQPVWME-RLGNIFAEGLAS--DGERLYQLTWTEGLLFTWSGMPPQRER 130 (268)
T ss_dssp TCCEEEEEEETTEEEEEETTTTEEEECCSSCSSCSEEE-ECTTCCEEEEEE--CSSCEEEEESSSCEEEEEETTTTEEEE
T ss_pred ccccceEEEECCEEEEEcCCCCEEEEEECCCCcEEeEE-CCCCcceeEEEE--eCCEEEEEEccCCEEEEEECCcCcEEE
Confidence 345677788765444444 4578999999999988777 553222233444 45545444 458899999999999999
Q ss_pred EecCCCccEEEEEeeCCEEEEEeCCCcEEEEECCCCCccEEEecc--cc---CCeEEEEEeCCCCEEEEEeCCCcEEEEE
Q 014934 245 TMEGHRLRVGALAWSSSLLSSGSRDKSILQRDIRAQEDFVSKLSG--HK---SEVCGLKWSYDNRELASGGNDNRLFVWN 319 (415)
Q Consensus 245 ~l~~h~~~V~~l~~~~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~--h~---~~V~~l~~spdg~~lasg~~dg~I~iwd 319 (415)
++... ..-..+++.+..|+.+..++.|.++|..+.+ .+..+.. +. ..++.|.|. +|+++|..-.++.|.+.|
T Consensus 131 ti~~~-~eGwGLt~Dg~~L~vSdGs~~l~~iDp~T~~-v~~~I~V~~~g~~v~~lNeLe~~-dG~lyanvw~s~~I~vID 207 (268)
T 3nok_A 131 TTRYS-GEGWGLCYWNGKLVRSDGGTMLTFHEPDGFA-LVGAVQVKLRGQPVELINELECA-NGVIYANIWHSSDVLEID 207 (268)
T ss_dssp EEECS-SCCCCEEEETTEEEEECSSSEEEEECTTTCC-EEEEEECEETTEECCCEEEEEEE-TTEEEEEETTCSEEEEEC
T ss_pred EEeCC-CceeEEecCCCEEEEECCCCEEEEEcCCCCe-EEEEEEeCCCCcccccccccEEe-CCEEEEEECCCCeEEEEe
Confidence 88743 3346777888888888889999999999877 3444432 21 245678887 787666666788999999
Q ss_pred CCCCceeEEeccC-------------CCcEEEEEEcCCCCcEEEEE
Q 014934 320 QHSTQPVLKYCEH-------------TAAVKAIAWSPHLHGLLASG 352 (415)
Q Consensus 320 ~~~~~~~~~~~~h-------------~~~V~~l~~sp~~~~llasg 352 (415)
.++++.+..+.-. ..-.+.|||.|+++.|+++|
T Consensus 208 p~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTG 253 (268)
T 3nok_A 208 PATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTG 253 (268)
T ss_dssp TTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEE
T ss_pred CCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeC
Confidence 9999988777521 13568999999999899988
No 241
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.88 E-value=1.7e-07 Score=87.93 Aligned_cols=216 Identities=10% Similarity=-0.006 Sum_probs=145.5
Q ss_pred CcEEEEEcCCeEEEEECCCCCeEEeEecCCCCCeEEEEEcCCCCeEEEEECCCcEEEEECCCCeeeEEecCCCccEEEEE
Q 014934 178 HNVLAVGLGNCVYLWNACSSKVTKLCDLGIDDSVCSVGWANRNTHLAVGTSHGKVQIWDASRCKRVRTMEGHRLRVGALA 257 (415)
Q Consensus 178 ~~~la~~~d~~V~iwd~~~~~~~~~~~~~~~~~V~~v~~sp~g~~la~g~~dg~V~iwd~~~~~~~~~l~~h~~~V~~l~ 257 (415)
+.+.+.+.++.|+.+|.. ++...... .....+.++...++|. |.+|+.++.|..+|.. ++.+..+......+.++.
T Consensus 108 ~~l~v~t~~~~l~~~d~~-g~~~~~~~-~~~~~~~~~~~~~~g~-l~vgt~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~ 183 (330)
T 3hxj_A 108 DILYVTSMDGHLYAINTD-GTEKWRFK-TKKAIYATPIVSEDGT-IYVGSNDNYLYAINPD-GTEKWRFKTNDAITSAAS 183 (330)
T ss_dssp TEEEEECTTSEEEEECTT-SCEEEEEE-CSSCCCSCCEECTTSC-EEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCE
T ss_pred CEEEEEecCCEEEEEcCC-CCEEEEEc-CCCceeeeeEEcCCCE-EEEEcCCCEEEEECCC-CCEeEEEecCCCceeeeE
Confidence 444444457899999988 77655554 2334566667777776 6668888999999998 776666655555566666
Q ss_pred ee-CCEEEEEeCCCcEEEEECCCCCccEEEeccccCCeEEEEEeCCCCEEEEEeCCCcEEEEECCCCceeEEeccCCCcE
Q 014934 258 WS-SSLLSSGSRDKSILQRDIRAQEDFVSKLSGHKSEVCGLKWSYDNRELASGGNDNRLFVWNQHSTQPVLKYCEHTAAV 336 (415)
Q Consensus 258 ~~-~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~spdg~~lasg~~dg~I~iwd~~~~~~~~~~~~h~~~V 336 (415)
.. ...+..++ +.|..+| .++. ...........+.++...++|.+ ..++.++.|..+|. +++.+..+......+
T Consensus 184 ~d~~g~l~v~t--~~l~~~d-~~g~-~~~~~~~~~~~~~~~~~~~~g~l-~v~t~~~gl~~~~~-~g~~~~~~~~~~~~~ 257 (330)
T 3hxj_A 184 IGKDGTIYFGS--DKVYAIN-PDGT-EKWNFYAGYWTVTRPAISEDGTI-YVTSLDGHLYAINP-DGTEKWRFKTGKRIE 257 (330)
T ss_dssp ECTTCCEEEES--SSEEEEC-TTSC-EEEEECCSSCCCSCCEECTTSCE-EEEETTTEEEEECT-TSCEEEEEECSSCCC
T ss_pred EcCCCEEEEEe--CEEEEEC-CCCc-EEEEEccCCcceeceEECCCCeE-EEEcCCCeEEEECC-CCCEeEEeeCCCCcc
Confidence 64 45566666 8899999 5554 34444444566888888888754 55666788888884 566666665544444
Q ss_pred EEEEEcCCCCcEEEEEcCCCCCeEEEEECCCCcEEEEeeC-CCCEEEEEECCCCCeEEEEEecCCCcEEEEECCCC
Q 014934 337 KAIAWSPHLHGLLASGGGTADRCIRFWNTTTNTHLSCMDT-GSQVCNLVWSKNVNELVSTHGYSQNQIIVWRYPTM 411 (415)
Q Consensus 337 ~~l~~sp~~~~llasggg~~d~~I~iwd~~t~~~~~~~~~-~~~V~~l~~s~~~~~l~s~~g~~dg~I~vw~~~s~ 411 (415)
..+...+++. +++.. .++.|..+|. +++.+..+.. ...+.++....+|+..+ |+.+|.+++...+..
T Consensus 258 ~~~~~~~~g~-l~v~t---~~ggl~~~d~-~g~~~~~~~~~~~~~~~~~~d~~g~l~~---gt~~G~~~~~~~~~~ 325 (330)
T 3hxj_A 258 SSPVIGNTDT-IYFGS---YDGHLYAINP-DGTEKWNFETGSWIIATPVIDENGTIYF---GTRNGKFYALFNLEH 325 (330)
T ss_dssp SCCEECTTSC-EEEEC---TTCEEEEECT-TSCEEEEEECSSCCCSCCEECTTCCEEE---ECTTSCEEEEEC---
T ss_pred ccceEcCCCe-EEEec---CCCCEEEECC-CCcEEEEEEcCCccccceEEcCCCEEEE---EcCCCeEEEEecccc
Confidence 5566666664 66533 5788999996 7877776654 34466777778887555 567899998876543
No 242
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.86 E-value=3.9e-07 Score=82.71 Aligned_cols=193 Identities=16% Similarity=0.203 Sum_probs=133.7
Q ss_pred ceeccCCCCCCCcceeEeecCCCcEEEE-EcCC--eEEEEECCCCCeEEeEecCCCCCeEEEEEcCCCCeEEEEE-CCCc
Q 014934 156 YKILDAPALQDDFYLNLVDWSSHNVLAV-GLGN--CVYLWNACSSKVTKLCDLGIDDSVCSVGWANRNTHLAVGT-SHGK 231 (415)
Q Consensus 156 ~~~ld~~~l~~~~~i~~l~ws~~~~la~-~~d~--~V~iwd~~~~~~~~~~~~~~~~~V~~v~~sp~g~~la~g~-~dg~ 231 (415)
++++..-.....-+...|.|+.+.+..+ |.++ .|+.+|+.++++.....++. ........++++.|...+ .++.
T Consensus 31 ~~vv~~~phd~~~ftqGL~~~~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~--~~FgeGit~~g~~ly~ltw~~~~ 108 (262)
T 3nol_A 31 YQIVHSYPHDTKAFTEGFFYRNGYFYESTGLNGRSSIRKVDIESGKTLQQIELGK--RYFGEGISDWKDKIVGLTWKNGL 108 (262)
T ss_dssp EEEEEEEECCTTCEEEEEEEETTEEEEEEEETTEEEEEEECTTTCCEEEEEECCT--TCCEEEEEEETTEEEEEESSSSE
T ss_pred eEEEEEecCCCCcccceEEEECCEEEEECCCCCCceEEEEECCCCcEEEEEecCC--ccceeEEEEeCCEEEEEEeeCCE
Confidence 3444332223344567788885433333 3344 89999999999988887653 333333334566666655 4789
Q ss_pred EEEEECCCCeeeEEecCCCccEEEEEeeCCEEEEEeCCCcEEEEECCCCCccEEEecc----cc-CCeEEEEEeCCCCEE
Q 014934 232 VQIWDASRCKRVRTMEGHRLRVGALAWSSSLLSSGSRDKSILQRDIRAQEDFVSKLSG----HK-SEVCGLKWSYDNREL 306 (415)
Q Consensus 232 V~iwd~~~~~~~~~l~~h~~~V~~l~~~~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~----h~-~~V~~l~~spdg~~l 306 (415)
+.+||..+.+.+.++.... .-..+++.+..|+....++.|.++|..+.+ .+..+.. .. ..++.+.|. +|+++
T Consensus 109 v~v~D~~t~~~~~ti~~~~-eG~glt~dg~~L~~SdGs~~i~~iDp~T~~-v~~~I~V~~~g~~~~~lNELe~~-~G~ly 185 (262)
T 3nol_A 109 GFVWNIRNLRQVRSFNYDG-EGWGLTHNDQYLIMSDGTPVLRFLDPESLT-PVRTITVTAHGEELPELNELEWV-DGEIF 185 (262)
T ss_dssp EEEEETTTCCEEEEEECSS-CCCCEEECSSCEEECCSSSEEEEECTTTCS-EEEEEECEETTEECCCEEEEEEE-TTEEE
T ss_pred EEEEECccCcEEEEEECCC-CceEEecCCCEEEEECCCCeEEEEcCCCCe-EEEEEEeccCCccccccceeEEE-CCEEE
Confidence 9999999999999887432 335677777777777668889999999877 3444332 11 335567887 78777
Q ss_pred EEEeCCCcEEEEECCCCceeEEeccC------------CCcEEEEEEcCCCCcEEEEEc
Q 014934 307 ASGGNDNRLFVWNQHSTQPVLKYCEH------------TAAVKAIAWSPHLHGLLASGG 353 (415)
Q Consensus 307 asg~~dg~I~iwd~~~~~~~~~~~~h------------~~~V~~l~~sp~~~~llasgg 353 (415)
|..-.++.|.+.|.++++.+..+... ..-.+.|||+|+++.|+++|-
T Consensus 186 an~w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK 244 (262)
T 3nol_A 186 ANVWQTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGK 244 (262)
T ss_dssp EEETTSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEET
T ss_pred EEEccCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECC
Confidence 66667889999999999988877532 134589999999998999883
No 243
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.86 E-value=3.7e-07 Score=92.05 Aligned_cols=185 Identities=10% Similarity=0.044 Sum_probs=135.4
Q ss_pred CCCeEEEEEC-CCcEEEEECCCCeeeEEecC-CCccEEEEEe----eCCEEEEEeC------------------CCcEEE
Q 014934 219 RNTHLAVGTS-HGKVQIWDASRCKRVRTMEG-HRLRVGALAW----SSSLLSSGSR------------------DKSILQ 274 (415)
Q Consensus 219 ~g~~la~g~~-dg~V~iwd~~~~~~~~~l~~-h~~~V~~l~~----~~~~l~sgs~------------------dg~I~i 274 (415)
||++|.+... ++.|.+.|+.+.++...+.- .......+++ +++++++++. ++.+.+
T Consensus 100 DG~~lfVnd~~~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vtv 179 (595)
T 1fwx_A 100 DGRFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFTA 179 (595)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEEE
T ss_pred CCCEEEEEcCCCCEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEEE
Confidence 8888888765 45699999999998875532 2234667775 2578887752 357899
Q ss_pred EECCCCCccEEEeccccCCeEEEEEeCCCCEEEEEeCCC--------------------------------------cEE
Q 014934 275 RDIRAQEDFVSKLSGHKSEVCGLKWSYDNRELASGGNDN--------------------------------------RLF 316 (415)
Q Consensus 275 wd~~~~~~~~~~~~~h~~~V~~l~~spdg~~lasg~~dg--------------------------------------~I~ 316 (415)
+|..+.+ ....+.-- +....++++|+|+++++.+.+. .|.
T Consensus 180 ID~~t~~-v~~qI~Vg-g~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V~ 257 (595)
T 1fwx_A 180 VDADKWE-VAWQVLVS-GNLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVK 257 (595)
T ss_dssp EETTTTE-EEEEEEES-SCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEE
T ss_pred EECCCCe-EEEEEEeC-CCccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcEE
Confidence 9999876 34443321 2456788999999998887543 367
Q ss_pred EEECCC--Cce-eEEeccCCCcEEEEEEcCCCCcEEEEEcCCCCCeEEEEECCCCc------------EEEEeeCCCCEE
Q 014934 317 VWNQHS--TQP-VLKYCEHTAAVKAIAWSPHLHGLLASGGGTADRCIRFWNTTTNT------------HLSCMDTGSQVC 381 (415)
Q Consensus 317 iwd~~~--~~~-~~~~~~h~~~V~~l~~sp~~~~llasggg~~d~~I~iwd~~t~~------------~~~~~~~~~~V~ 381 (415)
|.|.++ ++. +..+.. .....++.++|||+++++++. .+..|.++|+.+.+ .+..+..+....
T Consensus 258 VID~~~~~~~~~~~~Ipv-g~~PhGv~~sPDGk~v~V~~~--~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~vG~gP~ 334 (595)
T 1fwx_A 258 VVDGRKEASSLFTRYIPI-ANNPHGCNMAPDKKHLCVAGK--LSPTVTVLDVTRFDAVFYENADPRSAVVAEPELGLGPL 334 (595)
T ss_dssp EEECSGGGCCSSEEEEEE-ESSCCCEEECTTSSEEEEECT--TSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBCCSCEE
T ss_pred EEeCcccCCceeEEEEec-CCCceEEEEcCCCCEEEEeCC--CCCeEEEEECcccccccccccCcccceEEEcCCCCCcc
Confidence 777766 444 333322 234567999999999999887 78999999999763 566777888999
Q ss_pred EEEECCCCCeEEEEEecCCCcEEEEECCC
Q 014934 382 NLVWSKNVNELVSTHGYSQNQIIVWRYPT 410 (415)
Q Consensus 382 ~l~~s~~~~~l~s~~g~~dg~I~vw~~~s 410 (415)
.++|+++| .+.++ -.-|++|.+|++..
T Consensus 335 h~aF~~dG-~aY~t-~~ldsqV~kwdi~~ 361 (595)
T 1fwx_A 335 HTAFDGRG-NAYTS-LFLDSQVVKWNIED 361 (595)
T ss_dssp EEEECTTS-EEEEE-ETTTTEEEEEEHHH
T ss_pred eEEECCCC-eEEEE-EecCCcEEEEEhhH
Confidence 99999999 65555 57899999999875
No 244
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.85 E-value=8.5e-06 Score=74.32 Aligned_cols=215 Identities=6% Similarity=-0.046 Sum_probs=141.0
Q ss_pred ceeEeecCC-CcEEEEE--cCCeEEEEECCCCCeEEeEecCCCCCeEEEEEcCCCCeEEEEE-CCCcEEEEECCCCeeeE
Q 014934 169 YLNLVDWSS-HNVLAVG--LGNCVYLWNACSSKVTKLCDLGIDDSVCSVGWANRNTHLAVGT-SHGKVQIWDASRCKRVR 244 (415)
Q Consensus 169 ~i~~l~ws~-~~~la~~--~d~~V~iwd~~~~~~~~~~~~~~~~~V~~v~~sp~g~~la~g~-~dg~V~iwd~~~~~~~~ 244 (415)
....++|++ ++.|.++ ..+.|+.++..++....+.. ..-.....+++++++..|.++. ..+.|.++++.......
T Consensus 37 ~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~-~~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~ 115 (267)
T 1npe_A 37 VIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIR-QDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRV 115 (267)
T ss_dssp EEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEEC-TTCCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEE
T ss_pred cEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEEE-CCCCCccEEEEEecCCeEEEEECCCCEEEEEEcCCCCEEE
Confidence 356888987 4544444 35799999998766544442 2235789999999766555554 56789999986433222
Q ss_pred EecCCCccEEEEEeeC--CEEEEEeC---CCcEEEEECCCCCccEEEeccccCCeEEEEEeCCCCEEEE-EeCCCcEEEE
Q 014934 245 TMEGHRLRVGALAWSS--SLLSSGSR---DKSILQRDIRAQEDFVSKLSGHKSEVCGLKWSYDNRELAS-GGNDNRLFVW 318 (415)
Q Consensus 245 ~l~~h~~~V~~l~~~~--~~l~sgs~---dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~spdg~~las-g~~dg~I~iw 318 (415)
...........+++++ ..|+.+.. .+.|..+++..... ............++++++++..|.. -...+.|.++
T Consensus 116 ~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~~-~~~~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~ 194 (267)
T 1npe_A 116 LFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNR-RILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECL 194 (267)
T ss_dssp EECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCCC-EEEECTTCSCEEEEEEETTTTEEEEEETTTTEEEEE
T ss_pred EEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCCc-EEEEECCCCCCcEEEEcCCCCEEEEEECCCCEEEEE
Confidence 2222224568888874 56555554 36888888865432 2222223346789999998776655 4456899999
Q ss_pred ECCCCceeEEeccCCCcEEEEEEcCCCCcEEEEEcCCCCCeEEEEECCCCcEEEEeeCCC--CEEEEEECCCCC
Q 014934 319 NQHSTQPVLKYCEHTAAVKAIAWSPHLHGLLASGGGTADRCIRFWNTTTNTHLSCMDTGS--QVCNLVWSKNVN 390 (415)
Q Consensus 319 d~~~~~~~~~~~~h~~~V~~l~~sp~~~~llasggg~~d~~I~iwd~~t~~~~~~~~~~~--~V~~l~~s~~~~ 390 (415)
|.........+.. ......++.. +..++++.. ..+.|..+|..+++.+..+..+. ...++++.|++.
T Consensus 195 ~~~g~~~~~~~~~-~~~P~gi~~d--~~~lyva~~--~~~~v~~~d~~~g~~~~~i~~g~~~~p~gi~~~~~~~ 263 (267)
T 1npe_A 195 NPAQPGRRKVLEG-LQYPFAVTSY--GKNLYYTDW--KTNSVIAMDLAISKEMDTFHPHKQTRLYGITIALSQC 263 (267)
T ss_dssp ETTEEEEEEEEEC-CCSEEEEEEE--TTEEEEEET--TTTEEEEEETTTTEEEEEECCSSCCCCCCEEEECSCC
T ss_pred ecCCCceEEEecC-CCCceEEEEe--CCEEEEEEC--CCCeEEEEeCCCCCceEEEccccccccceeeecCccC
Confidence 9976543333322 2344566654 456888765 57899999999999998887553 467788877764
No 245
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.85 E-value=1.7e-06 Score=84.35 Aligned_cols=220 Identities=15% Similarity=0.178 Sum_probs=144.3
Q ss_pred eEEEEECCC-----CCeEEeEecCC-CCCeEEEEE-----------c--CCCCeEEEE-ECCCcEEEEECCCC----eee
Q 014934 188 CVYLWNACS-----SKVTKLCDLGI-DDSVCSVGW-----------A--NRNTHLAVG-TSHGKVQIWDASRC----KRV 243 (415)
Q Consensus 188 ~V~iwd~~~-----~~~~~~~~~~~-~~~V~~v~~-----------s--p~g~~la~g-~~dg~V~iwd~~~~----~~~ 243 (415)
.|.+.|+.. ++++....+.. .+....+.| + .++++|++. ..++.|.++|+.+. +.+
T Consensus 44 ~la~vDvdp~s~ty~~vi~~~~~p~~gde~HH~gwn~css~~~~~~~~~~~r~~l~v~~l~s~~I~viD~~t~p~~p~~~ 123 (462)
T 2ece_A 44 FIAVVDVNPKSETYSKIVHKVELPYINDELHHFGWNACSSALCPNGKPNIERRFLIVPGLRSSRIYIIDTKPNPREPKII 123 (462)
T ss_dssp EEEEEECCTTSTTTTSEEEEEECSSSCCCBCCCEESCCGGGGSTTCCTTCCSCEEEEEBTTTCCEEEEECCSCTTSCEEE
T ss_pred eEEEEECCCCCCCcceEEEEEECCCCCCcccccchhhhhhhcccccCCCccCCEEEEccCCCCeEEEEECCCCCCCceee
Confidence 566677765 67777666543 234444555 6 778777664 55788999999765 666
Q ss_pred EEec------C-CCccEEEEEeeC-CEEEEEeCC------CcEEEEECCCCCccEEEeccccC---CeEEEEEeCCCCEE
Q 014934 244 RTME------G-HRLRVGALAWSS-SLLSSGSRD------KSILQRDIRAQEDFVSKLSGHKS---EVCGLKWSYDNREL 306 (415)
Q Consensus 244 ~~l~------~-h~~~V~~l~~~~-~~l~sgs~d------g~I~iwd~~~~~~~~~~~~~h~~---~V~~l~~spdg~~l 306 (415)
.+++ . ....-..+...+ .+++++..+ |.|.++|..+.+ .+..+..... --..+.|+|+++.+
T Consensus 124 k~ie~~~~~~~~g~s~Ph~~~~~pdGi~Vs~~g~~~g~~~g~v~vlD~~T~~-v~~~~~~~~~~~~~~Yd~~~~p~~~~m 202 (462)
T 2ece_A 124 KVIEPEEVKKVSGYSRLHTVHCGPDAIYISALGNEEGEGPGGILMLDHYSFE-PLGKWEIDRGDQYLAYDFWWNLPNEVL 202 (462)
T ss_dssp EEECHHHHHHHHCEEEEEEEEECSSCEEEEEEEETTSCSCCEEEEECTTTCC-EEEECCSBCTTCCCCCCEEEETTTTEE
T ss_pred eeechhhcccccCCCcccceeECCCeEEEEcCCCcCCCCCCeEEEEECCCCe-EEEEEccCCCCccccceEEECCCCCEE
Confidence 6663 0 111233344442 366665555 789999999887 5666652211 13357889999998
Q ss_pred EEEe-------------------CCCcEEEEECCCCceeEEeccC--CCcEEEEEE--cCCCCcEEEEEc---CCCCCeE
Q 014934 307 ASGG-------------------NDNRLFVWNQHSTQPVLKYCEH--TAAVKAIAW--SPHLHGLLASGG---GTADRCI 360 (415)
Q Consensus 307 asg~-------------------~dg~I~iwd~~~~~~~~~~~~h--~~~V~~l~~--sp~~~~llasgg---g~~d~~I 360 (415)
++.. .+++|.+||+.+++.+.++..- ......+.| +|+++++++++. ...++.|
T Consensus 203 vsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V 282 (462)
T 2ece_A 203 VSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSI 282 (462)
T ss_dssp EECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEE
T ss_pred EEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecCCCCCccceeEeeECCCCCEEEEEEeeeccCCCceE
Confidence 8874 3689999999998888877542 134455656 999997777652 0035677
Q ss_pred EEEECCCCcE--EEEee--C-----------------CCCEEEEEECCCCCeEEEEEecCCCcEEEEECC
Q 014934 361 RFWNTTTNTH--LSCMD--T-----------------GSQVCNLVWSKNVNELVSTHGYSQNQIIVWRYP 409 (415)
Q Consensus 361 ~iwd~~t~~~--~~~~~--~-----------------~~~V~~l~~s~~~~~l~s~~g~~dg~I~vw~~~ 409 (415)
.+|....|+. ++.++ . +.....+.+|+||++|.++. ...+.|.+||+.
T Consensus 283 ~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~DGrfLYVSn-rg~d~VavfdV~ 351 (462)
T 2ece_A 283 WLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISLDDKFLYLSL-WGIGEVRQYDIS 351 (462)
T ss_dssp EEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEECTTSCEEEEEE-TTTTEEEEEECS
T ss_pred EEEEecCCceeEEEEEeCCCccccccccccccccccCCCceeEEEECCCCCEEEEEe-CCCCEEEEEEec
Confidence 7766554431 12211 1 24567899999999999874 456899999985
No 246
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=98.82 E-value=2.4e-07 Score=96.48 Aligned_cols=235 Identities=12% Similarity=0.074 Sum_probs=149.1
Q ss_pred CcEEEEEcCCeEEEEECCCCCeEEeEecCCCCCeEEEEEcC--CCCeEEEEEC------CCcEEEEECCCCeeeEEecCC
Q 014934 178 HNVLAVGLGNCVYLWNACSSKVTKLCDLGIDDSVCSVGWAN--RNTHLAVGTS------HGKVQIWDASRCKRVRTMEGH 249 (415)
Q Consensus 178 ~~~la~~~d~~V~iwd~~~~~~~~~~~~~~~~~V~~v~~sp--~g~~la~g~~------dg~V~iwd~~~~~~~~~l~~h 249 (415)
+.+++.+.++.|+.+|..+|+..-............+.-+| .+..++++.. +|.|..+|..+++.+-.+...
T Consensus 118 ~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~ 197 (668)
T 1kv9_A 118 DKVYVGTLDGRLIALDAKTGKAIWSQQTTDPAKPYSITGAPRVVKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRFYTV 197 (668)
T ss_dssp TEEEEECTTSEEEEEETTTCCEEEEEECSCTTSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESS
T ss_pred CEEEEEcCCCEEEEEECCCCCEeeeeccCCCCCcceecCCCEEECCEEEEeCCCCCcCCCCEEEEEECCCCcEEEEeccc
Confidence 44455556899999999999987776643211111111111 2345556543 589999999999987666421
Q ss_pred ---Cc----------------------------cEEEEEee--CCEEEEEeCCC-------------------cEEEEEC
Q 014934 250 ---RL----------------------------RVGALAWS--SSLLSSGSRDK-------------------SILQRDI 277 (415)
Q Consensus 250 ---~~----------------------------~V~~l~~~--~~~l~sgs~dg-------------------~I~iwd~ 277 (415)
.. ....++++ .+.++.++.++ .|..+|.
T Consensus 198 ~~~p~~~~~~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~ 277 (668)
T 1kv9_A 198 PGDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRP 277 (668)
T ss_dssp CCCTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECT
T ss_pred CCCCCccccccccccccccCCccceeeeCCCCccccceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcC
Confidence 00 00124554 46888887766 3999999
Q ss_pred CCCCccEEEecc-cc-------CCeEEEEEeCCCC---EEEEEeCCCcEEEEECCCCceeEEeccCC-----------C-
Q 014934 278 RAQEDFVSKLSG-HK-------SEVCGLKWSYDNR---ELASGGNDNRLFVWNQHSTQPVLKYCEHT-----------A- 334 (415)
Q Consensus 278 ~~~~~~~~~~~~-h~-------~~V~~l~~spdg~---~lasg~~dg~I~iwd~~~~~~~~~~~~h~-----------~- 334 (415)
++++..-+.-.. |. .+.....+..+|+ .++.++.+|.++++|..+++.+....... .
T Consensus 278 ~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~d~~~g~ 357 (668)
T 1kv9_A 278 DTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKLISAEKFGKVTWAEKVDLATGR 357 (668)
T ss_dssp TTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCCSEEEECTTTCC
T ss_pred CCCceeeEeecCCCccccccCCCCcEEEEeccCCcEEEEEEEECCCCEEEEEECCCCCEeccccccccccccccccccCC
Confidence 998743222222 22 2333333334675 68899999999999999999885443211 0
Q ss_pred cE------------------------EEEEEcCCCCcEEEEE---------------------------------cCCCC
Q 014934 335 AV------------------------KAIAWSPHLHGLLASG---------------------------------GGTAD 357 (415)
Q Consensus 335 ~V------------------------~~l~~sp~~~~llasg---------------------------------gg~~d 357 (415)
.+ ..++++|+...+++.. ....+
T Consensus 358 p~~~~~~~~~~~~~~~~p~~~G~~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~~~~~ 437 (668)
T 1kv9_A 358 PVEAPGVRYEKEPIVMWPSPFGAHNWHSMSFNPGTGLVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATDVPAAVVS 437 (668)
T ss_dssp EEECTTTTCSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCCCCGGGCE
T ss_pred ccccccccccCCeeEECCCCccccCCCcceECCCCCEEEEeccccceEeeeeccccccccccccCccccccCCCCCCCcc
Confidence 00 0156777665444321 00134
Q ss_pred CeEEEEECCCCcEEEEeeCCCCEEEEEECCCCCeEEEEEecCCCcEEEEECCCCccc
Q 014934 358 RCIRFWNTTTNTHLSCMDTGSQVCNLVWSKNVNELVSTHGYSQNQIIVWRYPTMSKV 414 (415)
Q Consensus 358 ~~I~iwd~~t~~~~~~~~~~~~V~~l~~s~~~~~l~s~~g~~dg~I~vw~~~s~~~l 414 (415)
+.|..||+.+|+.+..+..+..+....+...+..+++ |..|+.|++||..+++.+
T Consensus 438 g~l~A~D~~tG~~~W~~~~~~~~~~~~~~t~gg~vf~--g~~dg~l~a~d~~tG~~l 492 (668)
T 1kv9_A 438 GALLAWDPVKQKAAWKVPYPTHWNGGTLSTAGNLVFQ--GTAAGQMHAYSADKGEAL 492 (668)
T ss_dssp EEEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEEE--ECTTSEEEEEETTTCCEE
T ss_pred ceEEEEeCCCCcEEEEccCCCCCcCceeEeCCCEEEE--ECCcccchhhhhhcChhh
Confidence 8899999999999988876655555555567777877 778999999999988754
No 247
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.82 E-value=2.6e-05 Score=73.26 Aligned_cols=224 Identities=10% Similarity=-0.061 Sum_probs=142.6
Q ss_pred EEEEEcCCeEEEEECCCCCeEEeEecCCCCCeEEEEEcCCCCeEEEE-ECCCcEEEEECCC----CeeeEEecCCCccEE
Q 014934 180 VLAVGLGNCVYLWNACSSKVTKLCDLGIDDSVCSVGWANRNTHLAVG-TSHGKVQIWDASR----CKRVRTMEGHRLRVG 254 (415)
Q Consensus 180 ~la~~~d~~V~iwd~~~~~~~~~~~~~~~~~V~~v~~sp~g~~la~g-~~dg~V~iwd~~~----~~~~~~l~~h~~~V~ 254 (415)
+|.++....|+..++.+.+...+.. .-..+.+++|++++..|... ...+.|..+++.. ......+........
T Consensus 3 ~ll~~~~~~I~~i~~~~~~~~~~~~--~~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~ 80 (316)
T 1ijq_A 3 YLFFTNRHEVRKMTLDRSEYTSLIP--NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPD 80 (316)
T ss_dssp EEEEECBSSEEEEETTSCCCEEEEC--SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCC
T ss_pred EEEEECCCeEEEEECCCcceEehhc--CCCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcC
Confidence 5677777889999999887666553 34678999999876655554 4568899999875 222222332223345
Q ss_pred EEEee--CC-EEEEEeCCCcEEEEECCCCCccEEEeccccCCeEEEEEeCCCCEEEEEeC-C-CcEEEEECCCCceeEEe
Q 014934 255 ALAWS--SS-LLSSGSRDKSILQRDIRAQEDFVSKLSGHKSEVCGLKWSYDNRELASGGN-D-NRLFVWNQHSTQPVLKY 329 (415)
Q Consensus 255 ~l~~~--~~-~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~spdg~~lasg~~-d-g~I~iwd~~~~~~~~~~ 329 (415)
.++++ +. +.++-...+.|.+.|+.... .............+++++|.+..|..+.. . +.|..+++... ....+
T Consensus 81 glavd~~~~~ly~~d~~~~~I~~~~~~g~~-~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~-~~~~~ 158 (316)
T 1ijq_A 81 GLAVDWIHSNIYWTDSVLGTVSVADTKGVK-RKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGV-DIYSL 158 (316)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEETTSSS-EEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSC-CEEEE
T ss_pred EEEEeecCCeEEEEECCCCEEEEEeCCCCc-eEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCC-CeEEE
Confidence 56654 44 44555677899999987543 22223333456789999996666555443 3 68999888543 33333
Q ss_pred -ccCCCcEEEEEEcCCCCcEEEEEcCCCCCeEEEEECCCCcEEEEeeC---CCCEEEEEECCCCCeEEEEEecCCCcEEE
Q 014934 330 -CEHTAAVKAIAWSPHLHGLLASGGGTADRCIRFWNTTTNTHLSCMDT---GSQVCNLVWSKNVNELVSTHGYSQNQIIV 405 (415)
Q Consensus 330 -~~h~~~V~~l~~sp~~~~llasggg~~d~~I~iwd~~t~~~~~~~~~---~~~V~~l~~s~~~~~l~s~~g~~dg~I~v 405 (415)
...-.....|+++|++..|+++-. ..+.|..+|+........+.. .....++++.. + .|..+ ....+.|..
T Consensus 159 ~~~~~~~P~gla~d~~~~~lY~~D~--~~~~I~~~d~dg~~~~~~~~~~~~~~~P~giav~~-~-~ly~~-d~~~~~V~~ 233 (316)
T 1ijq_A 159 VTENIQWPNGITLDLLSGRLYWVDS--KLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFE-D-KVFWT-DIINEAIFS 233 (316)
T ss_dssp ECSSCSCEEEEEEETTTTEEEEEET--TTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEET-T-EEEEE-ETTTTEEEE
T ss_pred EECCCCCceEEEEeccCCEEEEEEC--CCCeEEEEecCCCceEEEeecCCccCCcEEEEEEC-C-EEEEE-ECCCCeEEE
Confidence 233456789999998887888876 678999999975333222222 24467788853 4 44443 456778888
Q ss_pred EECCCCc
Q 014934 406 WRYPTMS 412 (415)
Q Consensus 406 w~~~s~~ 412 (415)
++..+++
T Consensus 234 ~~~~~g~ 240 (316)
T 1ijq_A 234 ANRLTGS 240 (316)
T ss_dssp EETTTCC
T ss_pred EeCCCCc
Confidence 8865543
No 248
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.80 E-value=8.4e-08 Score=90.00 Aligned_cols=222 Identities=11% Similarity=0.038 Sum_probs=143.2
Q ss_pred eeEeecCCCcEEEEEcCCeEEEEECCCCCeEEeEecCCCCCeEEEEEcCCCCeEEEEECCCcEEEEECCCCeeeEEecCC
Q 014934 170 LNLVDWSSHNVLAVGLGNCVYLWNACSSKVTKLCDLGIDDSVCSVGWANRNTHLAVGTSHGKVQIWDASRCKRVRTMEGH 249 (415)
Q Consensus 170 i~~l~ws~~~~la~~~d~~V~iwd~~~~~~~~~~~~~~~~~V~~v~~sp~g~~la~g~~dg~V~iwd~~~~~~~~~l~~h 249 (415)
+..+...++..|.++..+ |+.+|. +++........ ........+. +..|.+|+.+|.|..+|.. ++.......+
T Consensus 62 ~~~~~~~~~g~l~v~t~~-l~~~d~-~g~~~~~~~~~-~~~~~~~~~~--~~~l~v~t~~~~l~~~d~~-g~~~~~~~~~ 135 (330)
T 3hxj_A 62 ECRPSIGKDGTIYFGSDK-VYAINP-DGTEKWRFDTK-KAIVSDFTIF--EDILYVTSMDGHLYAINTD-GTEKWRFKTK 135 (330)
T ss_dssp EECCEETTTTEECCSSCE-EEEECC-CGGGGGGSCC------CCEEEE--TTEEEEECTTSEEEEECTT-SCEEEEEECS
T ss_pred ccceEEecCCcEEEecCc-EEEECC-CCcEEEEEECC-CCcccCceEE--CCEEEEEecCCEEEEEcCC-CCEEEEEcCC
Confidence 344455554455555555 888986 55543333211 1122222333 5567888889999999988 7666555544
Q ss_pred CccEEEEEee-CCEEEEEeCCCcEEEEECCCCCccEEEeccccCCeEEEEEeCCCCEEEEEeCCCcEEEEECCCCceeEE
Q 014934 250 RLRVGALAWS-SSLLSSGSRDKSILQRDIRAQEDFVSKLSGHKSEVCGLKWSYDNRELASGGNDNRLFVWNQHSTQPVLK 328 (415)
Q Consensus 250 ~~~V~~l~~~-~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~spdg~~lasg~~dg~I~iwd~~~~~~~~~ 328 (415)
...+.++... ...++.++.++.|..+|.. +. ....+......+.++...+++.+++. + +.|..|| .+++.+..
T Consensus 136 ~~~~~~~~~~~~g~l~vgt~~~~l~~~d~~-g~-~~~~~~~~~~~~~~~~~d~~g~l~v~-t--~~l~~~d-~~g~~~~~ 209 (330)
T 3hxj_A 136 KAIYATPIVSEDGTIYVGSNDNYLYAINPD-GT-EKWRFKTNDAITSAASIGKDGTIYFG-S--DKVYAIN-PDGTEKWN 209 (330)
T ss_dssp SCCCSCCEECTTSCEEEECTTSEEEEECTT-SC-EEEEEECSSCCCSCCEECTTCCEEEE-S--SSEEEEC-TTSCEEEE
T ss_pred CceeeeeEEcCCCEEEEEcCCCEEEEECCC-CC-EeEEEecCCCceeeeEEcCCCEEEEE-e--CEEEEEC-CCCcEEEE
Confidence 4455555665 5678888888999999998 54 34444444556777888778875554 4 7899999 78877777
Q ss_pred eccCCCcEEEEEEcCCCCcEEEEEcCCCCCeEEEEECCCCcEEEEeeCCCC-EEEEEECCCCCeEEEEEecCCCcEEEEE
Q 014934 329 YCEHTAAVKAIAWSPHLHGLLASGGGTADRCIRFWNTTTNTHLSCMDTGSQ-VCNLVWSKNVNELVSTHGYSQNQIIVWR 407 (415)
Q Consensus 329 ~~~h~~~V~~l~~sp~~~~llasggg~~d~~I~iwd~~t~~~~~~~~~~~~-V~~l~~s~~~~~l~s~~g~~dg~I~vw~ 407 (415)
+......+.+++..+++. +++.. .++.|..+| .+++.+..+..... +..+...+++... . ++.+|.|..+|
T Consensus 210 ~~~~~~~~~~~~~~~~g~-l~v~t---~~~gl~~~~-~~g~~~~~~~~~~~~~~~~~~~~~g~l~-v--~t~~ggl~~~d 281 (330)
T 3hxj_A 210 FYAGYWTVTRPAISEDGT-IYVTS---LDGHLYAIN-PDGTEKWRFKTGKRIESSPVIGNTDTIY-F--GSYDGHLYAIN 281 (330)
T ss_dssp ECCSSCCCSCCEECTTSC-EEEEE---TTTEEEEEC-TTSCEEEEEECSSCCCSCCEECTTSCEE-E--ECTTCEEEEEC
T ss_pred EccCCcceeceEECCCCe-EEEEc---CCCeEEEEC-CCCCEeEEeeCCCCccccceEcCCCeEE-E--ecCCCCEEEEC
Confidence 766666788888888875 66544 578888887 46666666654332 3445666666544 4 45677888888
Q ss_pred CCCCc
Q 014934 408 YPTMS 412 (415)
Q Consensus 408 ~~s~~ 412 (415)
. +++
T Consensus 282 ~-~g~ 285 (330)
T 3hxj_A 282 P-DGT 285 (330)
T ss_dssp T-TSC
T ss_pred C-CCc
Confidence 4 443
No 249
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.79 E-value=1.8e-05 Score=75.59 Aligned_cols=234 Identities=9% Similarity=-0.058 Sum_probs=149.3
Q ss_pred eEeecCCCcEEEEEcCCeEEEEECCCCCeEEeEecCCCCCeEEEEEcCCCCeEEEE-ECCCcEEEEECCCCeeeEEecCC
Q 014934 171 NLVDWSSHNVLAVGLGNCVYLWNACSSKVTKLCDLGIDDSVCSVGWANRNTHLAVG-TSHGKVQIWDASRCKRVRTMEGH 249 (415)
Q Consensus 171 ~~l~ws~~~~la~~~d~~V~iwd~~~~~~~~~~~~~~~~~V~~v~~sp~g~~la~g-~~dg~V~iwd~~~~~~~~~l~~h 249 (415)
.|.+..+..+|.++....|+..++.......+.. ....+..++|.+.+..|... ...+.|..+++........+...
T Consensus 37 ~C~~~~~~~~ll~~~~~~I~~i~~~g~~~~~~~~--~~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~ 114 (349)
T 3v64_C 37 SCKALGPEPVLLFANRIDIRQVLPHRSEYTLLLN--NLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTG 114 (349)
T ss_dssp CEEESSSCCEEEEECBSCEEEECTTSCCEEEEEC--SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSS
T ss_pred cccccccCceeEeecccceEEEeCCCCeeEEeec--CCCceEEEEEeccccEEEEEeccCCceEEEecCCCCceEEEeCC
Confidence 3555555567777777789999987776655543 34568999999866555554 45778999998765433333322
Q ss_pred CccEEEEEee--C-CEEEEEeCCCcEEEEECCCCCccEEEeccccCCeEEEEEeCCCCEEEEE-eCC-CcEEEEECCCCc
Q 014934 250 RLRVGALAWS--S-SLLSSGSRDKSILQRDIRAQEDFVSKLSGHKSEVCGLKWSYDNRELASG-GND-NRLFVWNQHSTQ 324 (415)
Q Consensus 250 ~~~V~~l~~~--~-~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~spdg~~lasg-~~d-g~I~iwd~~~~~ 324 (415)
......++++ . .++++-...+.|.+.++..... ...+........+++++|.+..|... ... +.|..+++....
T Consensus 115 ~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~-~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~ 193 (349)
T 3v64_C 115 LESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHR-KVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSG 193 (349)
T ss_dssp CSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSC-EEEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCS
T ss_pred CCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCce-EEEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCC
Confidence 2334455554 3 4555666678899999876542 33333344567899999966555444 444 789999986543
Q ss_pred eeEEeccCCCcEEEEEEcCCCCcEEEEEcCCCCCeEEEEECCCCcEEEEee-CCCCEEEEEECCCCCeEEEEEecCCCcE
Q 014934 325 PVLKYCEHTAAVKAIAWSPHLHGLLASGGGTADRCIRFWNTTTNTHLSCMD-TGSQVCNLVWSKNVNELVSTHGYSQNQI 403 (415)
Q Consensus 325 ~~~~~~~h~~~V~~l~~sp~~~~llasggg~~d~~I~iwd~~t~~~~~~~~-~~~~V~~l~~s~~~~~l~s~~g~~dg~I 403 (415)
....+...-.....|+++|++..|+++-. ..+.|..+|+........+. ......++++. .+ .|..+ ....+.|
T Consensus 194 ~~~~~~~~~~~PnGla~d~~~~~lY~aD~--~~~~I~~~~~dG~~~~~~~~~~~~~P~giav~-~~-~ly~t-d~~~~~V 268 (349)
T 3v64_C 194 RRIIADTHLFWPNGLTIDYAGRRMYWVDA--KHHVIERANLDGSHRKAVISQGLPHPFAITVF-ED-SLYWT-DWHTKSI 268 (349)
T ss_dssp CEESCCSSCSCEEEEEEETTTTEEEEEET--TTTEEEEEETTSCSCEEEECSSCSSEEEEEEE-TT-EEEEE-ETTTTEE
T ss_pred cEEEEECCCCCcceEEEeCCCCEEEEEEC--CCCEEEEEeCCCCceEEEEeCCCCCceEEEEE-CC-EEEEe-cCCCCeE
Confidence 32222233456789999998887888876 67899999987544333332 23456778883 33 44443 4567788
Q ss_pred EEEECCCCc
Q 014934 404 IVWRYPTMS 412 (415)
Q Consensus 404 ~vw~~~s~~ 412 (415)
..++-.+++
T Consensus 269 ~~~~~~~G~ 277 (349)
T 3v64_C 269 NSANKFTGK 277 (349)
T ss_dssp EEEETTTCC
T ss_pred EEEEccCCC
Confidence 887754443
No 250
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.77 E-value=1.4e-05 Score=77.44 Aligned_cols=233 Identities=9% Similarity=-0.058 Sum_probs=150.2
Q ss_pred EeecCCCcEEEEEcCCeEEEEECCCCCeEEeEecCCCCCeEEEEEcCCCCeEEEE-ECCCcEEEEECCCCeeeEEecCCC
Q 014934 172 LVDWSSHNVLAVGLGNCVYLWNACSSKVTKLCDLGIDDSVCSVGWANRNTHLAVG-TSHGKVQIWDASRCKRVRTMEGHR 250 (415)
Q Consensus 172 ~l~ws~~~~la~~~d~~V~iwd~~~~~~~~~~~~~~~~~V~~v~~sp~g~~la~g-~~dg~V~iwd~~~~~~~~~l~~h~ 250 (415)
|.+..+..+|..+....|+.+++.......+.. ....+..++|.+.+..|... ...+.|..+++........+....
T Consensus 81 C~~~~~~~~l~~~~~~~I~~i~~~~~~~~~~~~--~~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~ 158 (386)
T 3v65_B 81 CKALGPEPVLLFANRIDIRQVLPHRSEYTLLLN--NLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGL 158 (386)
T ss_dssp EEECSSCCEEEEECBSCEEEECTTSCCCEEEEC--SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEECSSC
T ss_pred ECCccccceeEeecCccceeeccCCCcEEEEec--CCCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEeCCC
Confidence 444455567777777889999998877665553 34568999999866555544 457789999987655433333222
Q ss_pred ccEEEEEee--C-CEEEEEeCCCcEEEEECCCCCccEEEeccccCCeEEEEEeCCCCEEEEEe-CC-CcEEEEECCCCce
Q 014934 251 LRVGALAWS--S-SLLSSGSRDKSILQRDIRAQEDFVSKLSGHKSEVCGLKWSYDNRELASGG-ND-NRLFVWNQHSTQP 325 (415)
Q Consensus 251 ~~V~~l~~~--~-~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~spdg~~lasg~-~d-g~I~iwd~~~~~~ 325 (415)
.....++++ . .++++-...+.|.+.++.... ....+........+|+++|.+..|.... .. +.|..+++.....
T Consensus 159 ~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~-~~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~ 237 (386)
T 3v65_B 159 ESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAH-RKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGR 237 (386)
T ss_dssp SCCCCEEEETTTTEEEEEETTTTEEEECBTTSCS-CEEEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSC
T ss_pred CCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCc-eEEeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCc
Confidence 233445554 3 455555667788888887554 2333333345688999999766655544 34 6899999865443
Q ss_pred eEEeccCCCcEEEEEEcCCCCcEEEEEcCCCCCeEEEEECCCCcEEEEee-CCCCEEEEEECCCCCeEEEEEecCCCcEE
Q 014934 326 VLKYCEHTAAVKAIAWSPHLHGLLASGGGTADRCIRFWNTTTNTHLSCMD-TGSQVCNLVWSKNVNELVSTHGYSQNQII 404 (415)
Q Consensus 326 ~~~~~~h~~~V~~l~~sp~~~~llasggg~~d~~I~iwd~~t~~~~~~~~-~~~~V~~l~~s~~~~~l~s~~g~~dg~I~ 404 (415)
.......-.....|+|+|++..|+++-. ..+.|..+|+........+. ......++++. .+ .|..+ ....+.|.
T Consensus 238 ~~~~~~~~~~PnGlavd~~~~~lY~aD~--~~~~I~~~d~dG~~~~~~~~~~~~~P~giav~-~~-~ly~t-d~~~~~V~ 312 (386)
T 3v65_B 238 RIIADTHLFWPNGLTIDYAGRRMYWVDA--KHHVIERANLDGSHRKAVISQGLPHPFAITVF-ED-SLYWT-DWHTKSIN 312 (386)
T ss_dssp EEEECSSCSCEEEEEEEGGGTEEEEEET--TTTEEEEECTTSCSCEEEECSSCSSEEEEEEE-TT-EEEEE-ETTTTEEE
T ss_pred EEEEECCCCCeeeEEEeCCCCEEEEEEC--CCCEEEEEeCCCCeeEEEEECCCCCceEEEEE-CC-EEEEe-eCCCCeEE
Confidence 3333334456789999998887888876 67899999987544333333 23456778883 33 44443 45677888
Q ss_pred EEECCCCc
Q 014934 405 VWRYPTMS 412 (415)
Q Consensus 405 vw~~~s~~ 412 (415)
.++-.+++
T Consensus 313 ~~~~~~G~ 320 (386)
T 3v65_B 313 SANKFTGK 320 (386)
T ss_dssp EEETTTCC
T ss_pred EEECCCCc
Confidence 88754443
No 251
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.74 E-value=1.3e-05 Score=75.32 Aligned_cols=232 Identities=9% Similarity=0.017 Sum_probs=139.9
Q ss_pred eeEeecCC-CcEEEEE-cCCeEEEEECCCCCeEEeEecC------------------CCCCeEEEEEcC-CCCeEEEEEC
Q 014934 170 LNLVDWSS-HNVLAVG-LGNCVYLWNACSSKVTKLCDLG------------------IDDSVCSVGWAN-RNTHLAVGTS 228 (415)
Q Consensus 170 i~~l~ws~-~~~la~~-~d~~V~iwd~~~~~~~~~~~~~------------------~~~~V~~v~~sp-~g~~la~g~~ 228 (415)
...++|++ ++++.++ .++.|+.|+..+++........ ....+.++++.+ +|+ |.++..
T Consensus 21 p~~i~~d~~g~~l~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~-l~v~d~ 99 (322)
T 2fp8_A 21 PNSFTFDSTNKGFYTSVQDGRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQ-LYIVDC 99 (322)
T ss_dssp CCCEECCTTCSSEEEECTTSEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTE-EEEEET
T ss_pred ceEEEEcCCCCEEEEEcCCCeEEEECCCCCceEEEecccccccccccccccchhccccCCCCceEEEcCCCCc-EEEEEC
Confidence 44678887 6655555 5789999998877654433211 013578999998 554 555655
Q ss_pred CCcEEEEECCCCeeeEEec----C-CCccEEEEEeeC--CEEEEEeC------------------CCcEEEEECCCCCcc
Q 014934 229 HGKVQIWDASRCKRVRTME----G-HRLRVGALAWSS--SLLSSGSR------------------DKSILQRDIRAQEDF 283 (415)
Q Consensus 229 dg~V~iwd~~~~~~~~~l~----~-h~~~V~~l~~~~--~~l~sgs~------------------dg~I~iwd~~~~~~~ 283 (415)
.+.|..+|..+++. ..+. + .......+++.+ ..|..+.. ++.|..+|..++.
T Consensus 100 ~~~i~~~d~~~g~~-~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~-- 176 (322)
T 2fp8_A 100 YYHLSVVGSEGGHA-TQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKE-- 176 (322)
T ss_dssp TTEEEEECTTCEEC-EEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTE--
T ss_pred CCCEEEEeCCCCEE-EEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCCE--
Confidence 55688888775532 2221 1 112466777764 23433332 3668888876554
Q ss_pred EEEeccccCCeEEEEEeCCCCEEEEE-eCCCcEEEEECCCCc--eeEEeccCCCcEEEEEEcCCCCcEEEEEcC------
Q 014934 284 VSKLSGHKSEVCGLKWSYDNRELASG-GNDNRLFVWNQHSTQ--PVLKYCEHTAAVKAIAWSPHLHGLLASGGG------ 354 (415)
Q Consensus 284 ~~~~~~h~~~V~~l~~spdg~~lasg-~~dg~I~iwd~~~~~--~~~~~~~h~~~V~~l~~sp~~~~llasggg------ 354 (415)
...+........+|+|+|+|+.|..+ ...+.|.+|++.... ....+....+ ...+++.++|. ++++..+
T Consensus 177 ~~~~~~~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~~~g-P~gi~~d~~G~-l~va~~~~~~~~~ 254 (322)
T 2fp8_A 177 TTLLLKELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVKIPN-PGNIKRNADGH-FWVSSSEELDGNM 254 (322)
T ss_dssp EEEEEEEESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEECSS-EEEEEECTTSC-EEEEEEEETTSST
T ss_pred EEEeccCCccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEeCCC-CCCeEECCCCC-EEEEecCcccccc
Confidence 22222222346789999999866555 556899999987531 1122212223 78899999997 6665431
Q ss_pred --CCCCeEEEEECCCCcEEEEeeCC-----CCEEEEEECCCCCeEEEEEecCCCcEEEEECCCC
Q 014934 355 --TADRCIRFWNTTTNTHLSCMDTG-----SQVCNLVWSKNVNELVSTHGYSQNQIIVWRYPTM 411 (415)
Q Consensus 355 --~~d~~I~iwd~~t~~~~~~~~~~-----~~V~~l~~s~~~~~l~s~~g~~dg~I~vw~~~s~ 411 (415)
...+.|..+|. .|+.+..+... ..++.+++ .+++.+++ ....+.|.++++...
T Consensus 255 ~~~~~~~v~~~d~-~G~~~~~~~~~~g~~~~~~~~~~~-~~g~L~v~--~~~~~~i~~~~~~~~ 314 (322)
T 2fp8_A 255 HGRVDPKGIKFDE-FGNILEVIPLPPPFAGEHFEQIQE-HDGLLYIG--TLFHGSVGILVYDKK 314 (322)
T ss_dssp TSCEEEEEEEECT-TSCEEEEEECCTTTTTSCCCEEEE-ETTEEEEE--CSSCSEEEEEEC---
T ss_pred cCCCccEEEEECC-CCCEEEEEECCCCCccccceEEEE-eCCEEEEe--ecCCCceEEEecccc
Confidence 01467888886 47777777532 34666666 34544444 456789999987643
No 252
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.71 E-value=9.8e-07 Score=86.46 Aligned_cols=196 Identities=12% Similarity=0.069 Sum_probs=129.2
Q ss_pred eEeecCC-CcEEEEEc---CCeEEEEECCCCCeEEeEecCCCCCeEEEEEcCCC-CeEEEEECCCcEEEEECCCCeeeEE
Q 014934 171 NLVDWSS-HNVLAVGL---GNCVYLWNACSSKVTKLCDLGIDDSVCSVGWANRN-THLAVGTSHGKVQIWDASRCKRVRT 245 (415)
Q Consensus 171 ~~l~ws~-~~~la~~~---d~~V~iwd~~~~~~~~~~~~~~~~~V~~v~~sp~g-~~la~g~~dg~V~iwd~~~~~~~~~ 245 (415)
..+.++| ++.|.++. ++.|.+.|..+.++...+..+. . ....|+| ..+++.+.||.+.+.+..+++....
T Consensus 180 ~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~g--~---~~~~p~g~~~~v~~~~dG~~~~V~~~~~~v~~~ 254 (426)
T 3c75_H 180 WMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVPD--C---YHIFPASPTVFYMNCRDGSLARVDFADGETKVT 254 (426)
T ss_dssp GGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCS--E---EEEEEEETTEEEEEETTSSEEEEECCTTCCEEE
T ss_pred ceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEcCC--c---eeeccCCCcEEEEEcCCCCEEEEECCCCcEEEE
Confidence 3567888 66777663 4789999999999888876532 1 2334444 4555667788888888755554422
Q ss_pred ----ecCCCccE-EEEEee--CCEEEEEeCCCcEEEEECCCCCccE-EEec-------c---ccCCeEEEEEeCCCCEEE
Q 014934 246 ----MEGHRLRV-GALAWS--SSLLSSGSRDKSILQRDIRAQEDFV-SKLS-------G---HKSEVCGLKWSYDNRELA 307 (415)
Q Consensus 246 ----l~~h~~~V-~~l~~~--~~~l~sgs~dg~I~iwd~~~~~~~~-~~~~-------~---h~~~V~~l~~spdg~~la 307 (415)
+.....++ ..+.+. +..++..+..+.+.+.|+......+ ..+. . .......++++|+++.+.
T Consensus 255 ~~~~~~v~~~p~~~~~~~~~dg~~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~g~~~va~s~dg~rly 334 (426)
T 3c75_H 255 NTEVFHTEDELLINHPAFSLRSGRLVWPTYTGKIFQADLTAEGATFRAPIEALTEAERADDWRPGGWQQTAYHRQSDRIY 334 (426)
T ss_dssp ECCCCSCTTSCBCSCCEECTTTCEEEEEBTTSEEEEEEECSSCEEECCCEESSCTTTGGGTEEECSSSCEEEEGGGTEEE
T ss_pred eeeeeccCCCceeeEeeecCCCCEEEEEeCCCcEEEEeccCCceEEeeeeeeccccccccccccCCceeeEEcCCCCEEE
Confidence 11111111 112233 4566666778899999986543111 0000 0 011222378999988777
Q ss_pred EEeC----------CCcEEEEECCCCceeEEeccCCCcEEEEEEcCCCC-cEEEEEcCCCCCeEEEEECCCCcEEEEe
Q 014934 308 SGGN----------DNRLFVWNQHSTQPVLKYCEHTAAVKAIAWSPHLH-GLLASGGGTADRCIRFWNTTTNTHLSCM 374 (415)
Q Consensus 308 sg~~----------dg~I~iwd~~~~~~~~~~~~h~~~V~~l~~sp~~~-~llasggg~~d~~I~iwd~~t~~~~~~~ 374 (415)
+... ++.|.++|+.+.+.+.++.. ......++|+|+++ .++++.. .++.|.++|+.+++.+..+
T Consensus 335 Va~~~~~~gthk~~s~~VsVID~~T~kvv~~I~v-g~~P~gia~spDg~~~lyv~n~--~s~~VsVID~~t~kvv~tI 409 (426)
T 3c75_H 335 LLVDQRDEWKHKAASRFVVVLNAETGERINKIEL-GHEIDSINVSQDAEPLLYALSA--GTQTLHIYDAATGEELRSV 409 (426)
T ss_dssp EEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEE-EEEECEEEECCSSSCEEEEEET--TTTEEEEEETTTCCEEEEE
T ss_pred EEecccccccccCCCCEEEEEECCCCeEEEEEEC-CCCcCeEEEccCCCEEEEEEcC--CCCeEEEEECCCCCEEEEe
Confidence 6542 35799999999999988853 23578999999998 6666664 5899999999999999987
No 253
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.71 E-value=6.5e-05 Score=73.11 Aligned_cols=228 Identities=11% Similarity=-0.067 Sum_probs=148.4
Q ss_pred CCcEEEEEcCCeEEEEECCCCCeEEeEecCCCCCeEEEEEcCCCCeEEEE-ECCCcEEEEECCCC----eeeEEecCCCc
Q 014934 177 SHNVLAVGLGNCVYLWNACSSKVTKLCDLGIDDSVCSVGWANRNTHLAVG-TSHGKVQIWDASRC----KRVRTMEGHRL 251 (415)
Q Consensus 177 ~~~~la~~~d~~V~iwd~~~~~~~~~~~~~~~~~V~~v~~sp~g~~la~g-~~dg~V~iwd~~~~----~~~~~l~~h~~ 251 (415)
+..+|..+....|+..++.......+. ..-..+..|+|++.+..|... ...+.|+.+++... .....+.....
T Consensus 82 ~~~~ll~~~~~~I~~i~l~~~~~~~~~--~~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~ 159 (400)
T 3p5b_L 82 SIAYLFFTNRHEVRKMTLDRSEYTSLI--PNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQ 159 (400)
T ss_dssp TSCEEEEEETTEEEEECTTSCSCEEEE--CSCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCS
T ss_pred ccceeEEeccceeEEEccCCcceeEec--cccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCC
Confidence 445677777889999999887766655 345678999999866655555 45678988988652 22333333344
Q ss_pred cEEEEEee---CCEEEEEeCCCcEEEEECCCCCccEEEeccccCCeEEEEEeCCCCEEEEEe--CCCcEEEEECCCCcee
Q 014934 252 RVGALAWS---SSLLSSGSRDKSILQRDIRAQEDFVSKLSGHKSEVCGLKWSYDNRELASGG--NDNRLFVWNQHSTQPV 326 (415)
Q Consensus 252 ~V~~l~~~---~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~spdg~~lasg~--~dg~I~iwd~~~~~~~ 326 (415)
....|+++ ++++++-...+.|.+.++.... ....+........+|+++|.+..|.... ..+.|...++......
T Consensus 160 ~p~glavD~~~~~lY~~d~~~~~I~~~~~~g~~-~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~ 238 (400)
T 3p5b_L 160 APDGLAVDWIHSNIYWTDSVLGTVSVADTKGVK-RKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIY 238 (400)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEECTTTCS-EEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCE
T ss_pred CcccEEEEecCCceEEEECCCCeEEEEeCCCCc-eEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCccE
Confidence 56666665 3455555667889999987654 2233333345688999999766665554 2478999998654443
Q ss_pred EEeccCCCcEEEEEEcCCCCcEEEEEcCCCCCeEEEEECCCCcEEEEeeC---CCCEEEEEECCCCCeEEEEEecCCCcE
Q 014934 327 LKYCEHTAAVKAIAWSPHLHGLLASGGGTADRCIRFWNTTTNTHLSCMDT---GSQVCNLVWSKNVNELVSTHGYSQNQI 403 (415)
Q Consensus 327 ~~~~~h~~~V~~l~~sp~~~~llasggg~~d~~I~iwd~~t~~~~~~~~~---~~~V~~l~~s~~~~~l~s~~g~~dg~I 403 (415)
..+...-.....|++++++..|+.+-. ....|..+|+........+.. -....++++ ++..|+.+ ....+.|
T Consensus 239 ~~~~~~l~~P~glavd~~~~~lY~aD~--~~~~I~~~d~dG~~~~~~~~~~~~l~~P~gl~v--~~~~lywt-d~~~~~V 313 (400)
T 3p5b_L 239 SLVTENIQWPNGITLDLLSGRLYWVDS--KLHSISSIDVNGGNRKTILEDEKRLAHPFSLAV--FEDKVFWT-DIINEAI 313 (400)
T ss_dssp EEECSSCSCEEEEEEETTTTEEEEEET--TTTEEEEEETTSCCCEEEEECSSTTSSEEEEEE--ETTEEEEE-ESSSCSE
T ss_pred EEEECCCCceEEEEEEeCCCEEEEEEC--CCCEEEEEeCCCCccEEEEeCCCCCCCCEEEEE--eCCEEEEe-cCCCCeE
Confidence 333344467899999998887888765 678999999875443333332 234567777 33445443 4566788
Q ss_pred EEEECCCCc
Q 014934 404 IVWRYPTMS 412 (415)
Q Consensus 404 ~vw~~~s~~ 412 (415)
..++-.+++
T Consensus 314 ~~~~~~~G~ 322 (400)
T 3p5b_L 314 FSANRLTGS 322 (400)
T ss_dssp EEEESSSCC
T ss_pred EEEEcCCCC
Confidence 888865554
No 254
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.70 E-value=2.7e-06 Score=86.87 Aligned_cols=230 Identities=13% Similarity=0.074 Sum_probs=144.6
Q ss_pred CcEEEEEcCCeEEEEECCCCCeEEeEecCCC---CCeEEEEEcC--CCCeEEEEEC------CCcEEEEECCCCeeeEEe
Q 014934 178 HNVLAVGLGNCVYLWNACSSKVTKLCDLGID---DSVCSVGWAN--RNTHLAVGTS------HGKVQIWDASRCKRVRTM 246 (415)
Q Consensus 178 ~~~la~~~d~~V~iwd~~~~~~~~~~~~~~~---~~V~~v~~sp--~g~~la~g~~------dg~V~iwd~~~~~~~~~l 246 (415)
+.+++...++.|+.+|..+|+..-....... ..+.+ +| .+..+++++. +|.|..+|..+++.+-.+
T Consensus 116 ~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~---~P~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~ 192 (571)
T 2ad6_A 116 GQIVKKQANGHLLALDAKTGKINWEVEVCDPKVGSTLTQ---APFVAKDTVLMGCSGAELGVRGAVNAFDLKTGELKWRA 192 (571)
T ss_dssp TEEEEECTTSEEEEEETTTCCEEEEEECCCGGGTCBCCS---CCEEETTEEEEECBCGGGTCCCEEEEEETTTCCEEEEE
T ss_pred CEEEEEeCCCEEEEEECCCCCEEEEecCCCCCccceecc---CCEEECCEEEEEecCCccCCCCEEEEEECCCCcEEEEE
Confidence 4444545689999999999998776654320 01211 11 2345666665 789999999999887665
Q ss_pred cCCCcc-------------------------------------E-EEEEee--CCEEEEEeCC----------------C
Q 014934 247 EGHRLR-------------------------------------V-GALAWS--SSLLSSGSRD----------------K 270 (415)
Q Consensus 247 ~~h~~~-------------------------------------V-~~l~~~--~~~l~sgs~d----------------g 270 (415)
...... + ..++++ ...++.+..+ +
T Consensus 193 ~~~~~~~~~~~~p~~~~~~~~~G~~~~g~~~w~~~~~~~gg~~~w~~~a~d~~~g~vy~~~g~~~~~~~~~~~gd~~y~~ 272 (571)
T 2ad6_A 193 FATGSDDSVRLAKDFNSANPHYGQFGLGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSGNPAPWNETMRPGDNKWTM 272 (571)
T ss_dssp ESSSCHHHHTBCTTTTTTCGGGCCSSHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTTT
T ss_pred ccCCCccccccCcccccccccccccccccccCcccceecCCCCeeeeEEEcCCCCeEEEECCCCccccCCccCCCceeEE
Confidence 422110 0 123344 2566666532 2
Q ss_pred cEEEEECCCCCccEEEec--ccc--------CCeEEEEEeCCCC---EEEEEeCCCcEEEEECCCCceeEEeccCC----
Q 014934 271 SILQRDIRAQEDFVSKLS--GHK--------SEVCGLKWSYDNR---ELASGGNDNRLFVWNQHSTQPVLKYCEHT---- 333 (415)
Q Consensus 271 ~I~iwd~~~~~~~~~~~~--~h~--------~~V~~l~~spdg~---~lasg~~dg~I~iwd~~~~~~~~~~~~h~---- 333 (415)
.|..+|.++++. +-.++ .|. .++. +....+|+ .++.++.+|.++++|..+++.+..+....
T Consensus 273 ~v~Ald~~tG~~-~W~~~~~~~d~~d~~~~~~p~l-~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~~w~~~~~~~~~w 350 (571)
T 2ad6_A 273 TIWGRDLDTGMA-KWGYQKTPHDEWDFAGVNQMVL-TDQPVNGKMTPLLSHIDRNGILYTLNRENGNLIVAEKVDPAVNV 350 (571)
T ss_dssp EEEEEETTTCCE-EEEEESSTTCSSCCCCCCCCEE-EEEEETTEEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCS
T ss_pred EEEEEecCCCcE-EEEecCCCCcccccccCCCCEE-EecccCCcEEEEEEEeCCCcEEEEEECCCCCEEeeecccCCccc
Confidence 599999998874 33332 121 2221 22234674 57788999999999999999887764221
Q ss_pred ---------CcE--------------------------EEEEEcCCCCcEEEEEc---------------C---------
Q 014934 334 ---------AAV--------------------------KAIAWSPHLHGLLASGG---------------G--------- 354 (415)
Q Consensus 334 ---------~~V--------------------------~~l~~sp~~~~llasgg---------------g--------- 354 (415)
.++ ..++++|+...+++... |
T Consensus 351 ~~~~d~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~ 430 (571)
T 2ad6_A 351 FKKVDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGVDSYDPESRTLYAGLNHICMDWEPFMLPYRAGQFFVGATLA 430 (571)
T ss_dssp EEEECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEE
T ss_pred cccccccCCceecccccCCCCCCCceEECCCCccccCCCCceECCCCCEEEEEchhccccccccccccccCCccccccce
Confidence 111 13567777665554421 0
Q ss_pred ----------CCCCeEEEEECCCCcEEEEeeCCCCEEEEEECCCCCeEEEEEecCCCcEEEEECCCCccc
Q 014934 355 ----------TADRCIRFWNTTTNTHLSCMDTGSQVCNLVWSKNVNELVSTHGYSQNQIIVWRYPTMSKV 414 (415)
Q Consensus 355 ----------~~d~~I~iwd~~t~~~~~~~~~~~~V~~l~~s~~~~~l~s~~g~~dg~I~vw~~~s~~~l 414 (415)
..++.|..||+.+|+.+..+..+..+........+..+++ +..|+.|+.||..+++.+
T Consensus 431 ~~~~~~~~~~~~~g~l~a~D~~tG~~~W~~~~~~~~~~~~~~t~gg~v~~--g~~dg~l~a~D~~tG~~l 498 (571)
T 2ad6_A 431 MYPGPNGPTKKEMGQIRAFDLTTGKAKWTKWEKFAAWGGTLYTKGGLVWY--ATLDGYLKALDNKDGKEL 498 (571)
T ss_dssp EEECTTSTTSCCCEEEEEECTTTCCEEEEEEESSCCCSBCEEETTTEEEE--ECTTSEEEEEETTTCCEE
T ss_pred eccCccccCCCCCCeEEEEECCCCCEEEEecCCCCccceeEEECCCEEEE--EcCCCeEEEEECCCCCEE
Confidence 1358899999999999888876555444333334566666 678999999999988764
No 255
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=98.62 E-value=9.6e-05 Score=78.36 Aligned_cols=230 Identities=14% Similarity=0.114 Sum_probs=156.2
Q ss_pred cceeEeecCCCcEEEEEcCCeEEEEECCCCCeEEeEecC------CCCCeEEEEEcCCCCeEEEEECCCcEEEEECCCCe
Q 014934 168 FYLNLVDWSSHNVLAVGLGNCVYLWNACSSKVTKLCDLG------IDDSVCSVGWANRNTHLAVGTSHGKVQIWDASRCK 241 (415)
Q Consensus 168 ~~i~~l~ws~~~~la~~~d~~V~iwd~~~~~~~~~~~~~------~~~~V~~v~~sp~g~~la~g~~dg~V~iwd~~~~~ 241 (415)
-.|.++...+...|-+|.++.|++|+..+++........ ....|.++...++|. |.+|+.++-|..|+..+..
T Consensus 263 ~~i~~i~~d~~g~lWigt~~Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g~-lWigt~~~Gl~~~~~~~~~ 341 (795)
T 4a2l_A 263 NYIRSLAMDSQNRLWIGTFNDLNIYHEGTDSFASYSSNPVENGSLSQRSVRSIFMDSQGG-MWLGTYFGGLNYYHPIRNR 341 (795)
T ss_dssp SBEEEEEECTTSCEEEEESSCEEEEETTTTEEEEECCCTTSTTSCSSSCEEEEEECTTSC-EEEEESSSCEEEECGGGGS
T ss_pred CeEEEEEEcCCCCEEEEeCChhheEcCCCCeEEEEecCCCCCCCCCCCcEEEEEEeCCcC-EEEEECCCCeEEeCCCccc
Confidence 358888887744344444457999998887765443211 135799999998887 5668887889999876544
Q ss_pred eeEEecC-------CCccEEEEEee-CCEEEEEeCCCcEEEEECCCCCccEEEecc--------ccCCeEEEEEeCCCCE
Q 014934 242 RVRTMEG-------HRLRVGALAWS-SSLLSSGSRDKSILQRDIRAQEDFVSKLSG--------HKSEVCGLKWSYDNRE 305 (415)
Q Consensus 242 ~~~~l~~-------h~~~V~~l~~~-~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~--------h~~~V~~l~~spdg~~ 305 (415)
.. .+.. ....|.++... ...|..|+.++-|..||..+.. ....... ....|.++...++|++
T Consensus 342 ~~-~~~~~~~~~~l~~~~V~~i~~d~~g~lWiGt~~~Gl~~~~~~~~~-~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~ 419 (795)
T 4a2l_A 342 FK-NIRNIPYKNSLSDNVVSCIVEDKDKNLWIGTNDGGLNLYNPITQR-FTSYTLQEDESARGIGSNNIKAVYVDEKKSL 419 (795)
T ss_dssp SE-EECCCTTSSSCSCSSEEEEEECTTSCEEEEESSSCEEEECTTTCC-EEEECCC------CCSCSCEEEEEEETTTTE
T ss_pred ce-EEcCCCCCCCCCCCeeEEEEECCCCCEEEEECCCCeEEEcCCCCc-EEEEecCCCCcccCCCCccEEEEEEcCCCCE
Confidence 22 2221 23568999887 4578889988889999987654 2222111 2357999999989985
Q ss_pred EEEEeCCCcEEEEECCCCceeEEec-----cCCCcEEEEEEcCCCCcEEEEEcCCCCCeEEEEECCCCcEEEEee-----
Q 014934 306 LASGGNDNRLFVWNQHSTQPVLKYC-----EHTAAVKAIAWSPHLHGLLASGGGTADRCIRFWNTTTNTHLSCMD----- 375 (415)
Q Consensus 306 lasg~~dg~I~iwd~~~~~~~~~~~-----~h~~~V~~l~~sp~~~~llasggg~~d~~I~iwd~~t~~~~~~~~----- 375 (415)
|..|+.++-|.+||..+++.. .+. .+...|.++...+++. |.+.. . +.|.+||..+++......
T Consensus 420 lWigt~~~Gl~~~d~~~~~~~-~~~~~~~~l~~~~v~~i~~d~~g~-lwigt---~-~Gl~~~~~~~~~~~~~~~~~~~~ 493 (795)
T 4a2l_A 420 VYIGTHAGGLSILHRNSGQVE-NFNQRNSQLVNENVYAILPDGEGN-LWLGT---L-SALVRFNPEQRSFTTIEKEKDGT 493 (795)
T ss_dssp EEEEETTTEEEEEETTTCCEE-EECTTTSCCSCSCEEEEEECSSSC-EEEEE---S-SCEEEEETTTTEEEECCBCTTCC
T ss_pred EEEEeCcCceeEEeCCCCcEE-EeecCCCCcCCCeeEEEEECCCCC-EEEEe---c-CceeEEeCCCCeEEEcccccccc
Confidence 677787777999999887643 332 1345799999888876 55533 3 458899988876433221
Q ss_pred --CCCCEEEEEECCCCCeEEEEEecCCCcEEEEECCC
Q 014934 376 --TGSQVCNLVWSKNVNELVSTHGYSQNQIIVWRYPT 410 (415)
Q Consensus 376 --~~~~V~~l~~s~~~~~l~s~~g~~dg~I~vw~~~s 410 (415)
....|.++...++|+..+.+ . +-|..|+..+
T Consensus 494 ~~~~~~i~~i~~d~~g~lWigt---~-~Gl~~~~~~~ 526 (795)
T 4a2l_A 494 PVVSKQITTLFRDSHKRLWIGG---E-EGLSVFKQEG 526 (795)
T ss_dssp BCCCCCEEEEEECTTCCEEEEE---S-SCEEEEEEET
T ss_pred ccCCceEEEEEECCCCCEEEEe---C-CceEEEeCCC
Confidence 13568999999999877763 2 4577777543
No 256
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=98.59 E-value=4.4e-06 Score=86.95 Aligned_cols=207 Identities=13% Similarity=0.055 Sum_probs=135.8
Q ss_pred CCeEEEEECCCCCeEEeEecCC--CC----------------------------CeEEEEEcCCCCeEEEEECCCc----
Q 014934 186 GNCVYLWNACSSKVTKLCDLGI--DD----------------------------SVCSVGWANRNTHLAVGTSHGK---- 231 (415)
Q Consensus 186 d~~V~iwd~~~~~~~~~~~~~~--~~----------------------------~V~~v~~sp~g~~la~g~~dg~---- 231 (415)
++.|+.+|..+|+..-.+.... .. ....+++.+++..+.+++.++.
T Consensus 177 ~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~ 256 (668)
T 1kv9_A 177 RGFVSAYDADTGKLAWRFYTVPGDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNR 256 (668)
T ss_dssp BCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCH
T ss_pred CCEEEEEECCCCcEEEEecccCCCCCccccccccccccccCCccceeeeCCCCccccceEEcCCCCEEEEeCCCCCcccc
Confidence 4789999999999877665311 00 1124678888888888887763
Q ss_pred ---------------EEEEECCCCeeeEEecC--CC-------cc--EEEEEeeCC---EEEEEeCCCcEEEEECCCCCc
Q 014934 232 ---------------VQIWDASRCKRVRTMEG--HR-------LR--VGALAWSSS---LLSSGSRDKSILQRDIRAQED 282 (415)
Q Consensus 232 ---------------V~iwd~~~~~~~~~l~~--h~-------~~--V~~l~~~~~---~l~sgs~dg~I~iwd~~~~~~ 282 (415)
|..+|..+++.+-.+.. |. .+ +..+.+.+. .++.++.+|.++++|..+++.
T Consensus 257 ~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~ 336 (668)
T 1kv9_A 257 EVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKL 336 (668)
T ss_dssp HHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCE
T ss_pred CCCCCCCCCceeeeeEEEEcCCCCceeeEeecCCCccccccCCCCcEEEEeccCCcEEEEEEEECCCCEEEEEECCCCCE
Confidence 99999999998766653 22 22 223444553 689999999999999998873
Q ss_pred cEEEecccc------------CC------------------------eEEEEEeCCCCEEEEEe----------------
Q 014934 283 FVSKLSGHK------------SE------------------------VCGLKWSYDNRELASGG---------------- 310 (415)
Q Consensus 283 ~~~~~~~h~------------~~------------------------V~~l~~spdg~~lasg~---------------- 310 (415)
+....... .+ -..++++|+..++....
T Consensus 337 -l~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~p~~~G~~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~ 415 (668)
T 1kv9_A 337 -ISAEKFGKVTWAEKVDLATGRPVEAPGVRYEKEPIVMWPSPFGAHNWHSMSFNPGTGLVYIPYQEVPGVYRNEGKDFVT 415 (668)
T ss_dssp -EEEEESSCCCSEEEECTTTCCEEECTTTTCSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEECCCGGGCCC
T ss_pred -eccccccccccccccccccCCccccccccccCCeeEECCCCccccCCCcceECCCCCEEEEeccccceEeeeecccccc
Confidence 32111000 00 01267888777665421
Q ss_pred --------------------CCCcEEEEECCCCceeEEeccCCCcEEEEEEcCCCCcEEEEEcCCCCCeEEEEECCCCcE
Q 014934 311 --------------------NDNRLFVWNQHSTQPVLKYCEHTAAVKAIAWSPHLHGLLASGGGTADRCIRFWNTTTNTH 370 (415)
Q Consensus 311 --------------------~dg~I~iwd~~~~~~~~~~~~h~~~V~~l~~sp~~~~llasggg~~d~~I~iwd~~t~~~ 370 (415)
.+|.|..||+.+++.+.++..+. .+....+...+. +++.++ .|+.|+.||..+|+.
T Consensus 416 ~~~~~~g~~~~~~~~~p~~~~~g~l~A~D~~tG~~~W~~~~~~-~~~~~~~~t~gg-~vf~g~--~dg~l~a~d~~tG~~ 491 (668)
T 1kv9_A 416 RKAFNTAAGFADATDVPAAVVSGALLAWDPVKQKAAWKVPYPT-HWNGGTLSTAGN-LVFQGT--AAGQMHAYSADKGEA 491 (668)
T ss_dssp CSSCCCSSCGGGCCCCCGGGCEEEEEEEETTTTEEEEEEEESS-SCCCCEEEETTT-EEEEEC--TTSEEEEEETTTCCE
T ss_pred ccccccCccccccCCCCCCCccceEEEEeCCCCcEEEEccCCC-CCcCceeEeCCC-EEEEEC--CcccchhhhhhcChh
Confidence 24789999999999988775433 223233334454 555554 899999999999999
Q ss_pred EEEeeCCCCEE--EEEECCCCC-eEEEEEe
Q 014934 371 LSCMDTGSQVC--NLVWSKNVN-ELVSTHG 397 (415)
Q Consensus 371 ~~~~~~~~~V~--~l~~s~~~~-~l~s~~g 397 (415)
+..+..+..+. -+.+..+|+ +++.++|
T Consensus 492 l~~~~~~~~~~~~p~~~~~~G~~yva~~~G 521 (668)
T 1kv9_A 492 LWQFEAQSGIVAAPMTFELAGRQYVAIMAG 521 (668)
T ss_dssp EEEEECSSCCCSCCEEEEETTEEEEEEEEC
T ss_pred heEecCCCCcccCceEEEECCEEEEEEEec
Confidence 99887654332 244555666 5555554
No 257
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.59 E-value=8.4e-05 Score=69.25 Aligned_cols=219 Identities=9% Similarity=0.035 Sum_probs=135.1
Q ss_pred cceeEeecCC-CcEEEEE-cCCeEEEEECCCCCeEEeEecCCCCCeEEEEEcCCCCeEEEEECCC--cEEEEECCCCeee
Q 014934 168 FYLNLVDWSS-HNVLAVG-LGNCVYLWNACSSKVTKLCDLGIDDSVCSVGWANRNTHLAVGTSHG--KVQIWDASRCKRV 243 (415)
Q Consensus 168 ~~i~~l~ws~-~~~la~~-~d~~V~iwd~~~~~~~~~~~~~~~~~V~~v~~sp~g~~la~g~~dg--~V~iwd~~~~~~~ 243 (415)
.....++|++ ++++++. .++.|+.|+..+ +....... ...+.++++.++|+++++..... .|..+|..+++..
T Consensus 32 ~~pegia~~~~g~lyv~d~~~~~I~~~d~~g-~~~~~~~~--~~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g~~~ 108 (306)
T 2p4o_A 32 TFLENLASAPDGTIFVTNHEVGEIVSITPDG-NQQIHATV--EGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTVE 108 (306)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECTTC-CEEEEEEC--SSEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSCEE
T ss_pred CCcceEEECCCCCEEEEeCCCCeEEEECCCC-ceEEEEeC--CCCceeEEEcCCCcEEEEeccCCcceEEEEcCCCCeEE
Confidence 4577899988 6666666 468999999865 44444443 35789999999999665544332 4667777777643
Q ss_pred EEecC-CCccEEEEE-eeCCEEEEEe-CCCcEEEEECCCCCccEEEec---------cccCCeEEEEEeCCCCEEEEE-e
Q 014934 244 RTMEG-HRLRVGALA-WSSSLLSSGS-RDKSILQRDIRAQEDFVSKLS---------GHKSEVCGLKWSYDNRELASG-G 310 (415)
Q Consensus 244 ~~l~~-h~~~V~~l~-~~~~~l~sgs-~dg~I~iwd~~~~~~~~~~~~---------~h~~~V~~l~~spdg~~lasg-~ 310 (415)
..... .......++ |.+..++... .++.|+++|.......+.... ..-....+| +++++.|..+ .
T Consensus 109 ~~~~~~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi--s~dg~~lyv~d~ 186 (306)
T 2p4o_A 109 TLLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL--KRFGNFLYVSNT 186 (306)
T ss_dssp EEEECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE--EEETTEEEEEET
T ss_pred EEEeCCCccccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc--CcCCCEEEEEeC
Confidence 32221 112223333 4444444444 588999999865421111111 111235566 7888766554 4
Q ss_pred CCCcEEEEECCC-Cce--eEEeccCCCcEEEEEEcCCCCcEEEEEcCCCCCeEEEEECCCCcEEE--EeeCC-CCEEEEE
Q 014934 311 NDNRLFVWNQHS-TQP--VLKYCEHTAAVKAIAWSPHLHGLLASGGGTADRCIRFWNTTTNTHLS--CMDTG-SQVCNLV 384 (415)
Q Consensus 311 ~dg~I~iwd~~~-~~~--~~~~~~h~~~V~~l~~sp~~~~llasggg~~d~~I~iwd~~t~~~~~--~~~~~-~~V~~l~ 384 (415)
..+.|.+||+.. ++. ...+.. ......+++.++|. ++++.. ..+.|.++|.. |+... .+... ....+++
T Consensus 187 ~~~~I~~~~~~~~g~~~~~~~~~~-~~~P~gi~vd~dG~-l~va~~--~~~~V~~~~~~-G~~~~~~~~~~~~~~p~~~a 261 (306)
T 2p4o_A 187 EKMLLLRIPVDSTDKPGEPEIFVE-QTNIDDFAFDVEGN-LYGATH--IYNSVVRIAPD-RSTTIIAQAEQGVIGSTAVA 261 (306)
T ss_dssp TTTEEEEEEBCTTSCBCCCEEEEE-SCCCSSEEEBTTCC-EEEECB--TTCCEEEECTT-CCEEEEECGGGTCTTEEEEE
T ss_pred CCCEEEEEEeCCCCCCCccEEEec-cCCCCCeEECCCCC-EEEEeC--CCCeEEEECCC-CCEEEEeecccccCCceEEE
Confidence 568899999864 321 112211 13456689999986 666654 57889999975 66532 34433 6789999
Q ss_pred EC---CCCCeEEEEE
Q 014934 385 WS---KNVNELVSTH 396 (415)
Q Consensus 385 ~s---~~~~~l~s~~ 396 (415)
|. ++++.|+++.
T Consensus 262 ~~g~~~d~~~LyVt~ 276 (306)
T 2p4o_A 262 FGQTEGDCTAIYVVT 276 (306)
T ss_dssp ECCSTTTTTEEEEEE
T ss_pred EecccCCCCEEEEEC
Confidence 99 8988877754
No 258
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=98.56 E-value=6.5e-05 Score=70.70 Aligned_cols=227 Identities=11% Similarity=0.010 Sum_probs=142.4
Q ss_pred CcEEEEEcCCeEEEEECCCCC--eEEeEecCCCCCeEEEEEcCCCCeE-EEEECCCcEEEEECCCCeee-EEecCCCccE
Q 014934 178 HNVLAVGLGNCVYLWNACSSK--VTKLCDLGIDDSVCSVGWANRNTHL-AVGTSHGKVQIWDASRCKRV-RTMEGHRLRV 253 (415)
Q Consensus 178 ~~~la~~~d~~V~iwd~~~~~--~~~~~~~~~~~~V~~v~~sp~g~~l-a~g~~dg~V~iwd~~~~~~~-~~l~~h~~~V 253 (415)
.-+|.++....|+.+++.... ..... ..-..+.+++|.+.+..| ++-...+.|..+++...... ..+.......
T Consensus 4 ~p~ll~~~~~~I~~i~l~~~~~~~~~~~--~~~~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l~~p 81 (318)
T 3sov_A 4 APLLLYANRRDLRLVDATNGKENATIVV--GGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSP 81 (318)
T ss_dssp CCEEEEECEEEEEEEETTCTTSCCEEEE--EEEEEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEECCSCC
T ss_pred ccEEEEEccCeEEEEECCCCceEEEEEe--cCCCccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcCCCCCc
Confidence 346777777899999998764 22222 222457799999865544 44455678999998765321 1222112234
Q ss_pred EEEEee--C-CEEEEEeCCCcEEEEECCCCCccEEEeccccCCeEEEEEeCCCCEEEEEe--CCCcEEEEECCCCceeEE
Q 014934 254 GALAWS--S-SLLSSGSRDKSILQRDIRAQEDFVSKLSGHKSEVCGLKWSYDNRELASGG--NDNRLFVWNQHSTQPVLK 328 (415)
Q Consensus 254 ~~l~~~--~-~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~spdg~~lasg~--~dg~I~iwd~~~~~~~~~ 328 (415)
..+++. . .++++-...+.|.++++..... ............+++++|.+..|.... ..+.|...++........
T Consensus 82 ~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~-~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~ 160 (318)
T 3sov_A 82 DGLACDWLGEKLYWTDSETNRIEVSNLDGSLR-KVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFII 160 (318)
T ss_dssp CEEEEETTTTEEEEEETTTTEEEEEETTSCSC-EEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSCEEE
T ss_pred cEEEEEcCCCeEEEEECCCCEEEEEECCCCcE-EEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCeEEE
Confidence 445554 3 4555556678899999876542 223334445678999999766666555 357899998864333222
Q ss_pred eccCCCcEEEEEEcCCCCcEEEEEcCCCCCeEEEEECCCCcEEEEee-CCCCEEEEEECCCCCeEEEEEecCCCcEEEEE
Q 014934 329 YCEHTAAVKAIAWSPHLHGLLASGGGTADRCIRFWNTTTNTHLSCMD-TGSQVCNLVWSKNVNELVSTHGYSQNQIIVWR 407 (415)
Q Consensus 329 ~~~h~~~V~~l~~sp~~~~llasggg~~d~~I~iwd~~t~~~~~~~~-~~~~V~~l~~s~~~~~l~s~~g~~dg~I~vw~ 407 (415)
....-.....|+|+|++..|+.+-. ..+.|..+|+........+. ......++++.. ..++.+ ....+.|..++
T Consensus 161 ~~~~l~~Pnglavd~~~~~lY~aD~--~~~~I~~~d~dG~~~~~~~~~~~~~P~glav~~--~~lywt-d~~~~~V~~~~ 235 (318)
T 3sov_A 161 INSEIYWPNGLTLDYEEQKLYWADA--KLNFIHKSNLDGTNRQAVVKGSLPHPFALTLFE--DILYWT-DWSTHSILACN 235 (318)
T ss_dssp ECSSCSCEEEEEEETTTTEEEEEET--TTTEEEEEETTSCSCEEEECSCCSCEEEEEEET--TEEEEE-ETTTTEEEEEE
T ss_pred EECCCCCccEEEEeccCCEEEEEEC--CCCEEEEEcCCCCceEEEecCCCCCceEEEEeC--CEEEEE-ecCCCeEEEEE
Confidence 2333456789999998887888876 68899999987543322222 334567777753 344443 45677888888
Q ss_pred CCCCc
Q 014934 408 YPTMS 412 (415)
Q Consensus 408 ~~s~~ 412 (415)
..+++
T Consensus 236 ~~~G~ 240 (318)
T 3sov_A 236 KYTGE 240 (318)
T ss_dssp TTTCC
T ss_pred CCCCC
Confidence 76654
No 259
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=98.55 E-value=0.00016 Score=76.54 Aligned_cols=225 Identities=12% Similarity=0.058 Sum_probs=152.9
Q ss_pred ceeEeecCC-CcEEEEEcCCeEEEEECCCCCeEEeEecC-------CCCCeEEEEEcCCCCeEEEEECCCcEEEEECCCC
Q 014934 169 YLNLVDWSS-HNVLAVGLGNCVYLWNACSSKVTKLCDLG-------IDDSVCSVGWANRNTHLAVGTSHGKVQIWDASRC 240 (415)
Q Consensus 169 ~i~~l~ws~-~~~la~~~d~~V~iwd~~~~~~~~~~~~~-------~~~~V~~v~~sp~g~~la~g~~dg~V~iwd~~~~ 240 (415)
.|.++...+ +++.++..++.|..|+..+++........ ....|.++...++|..|.+|+.++-|.+||..++
T Consensus 358 ~V~~i~~d~~g~lWiGt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~ 437 (795)
T 4a2l_A 358 VVSCIVEDKDKNLWIGTNDGGLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYIGTHAGGLSILHRNSG 437 (795)
T ss_dssp SEEEEEECTTSCEEEEESSSCEEEECTTTCCEEEECCC------CCSCSCEEEEEEETTTTEEEEEETTTEEEEEETTTC
T ss_pred eeEEEEECCCCCEEEEECCCCeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcCCCCEEEEEeCcCceeEEeCCCC
Confidence 477888777 55555556678999999887765543211 1357999999888886778888778999999877
Q ss_pred eeeEEec----CCCccEEEEEee-CCEEEEEeCCCcEEEEECCCCCccEEEecc-------ccCCeEEEEEeCCCCEEEE
Q 014934 241 KRVRTME----GHRLRVGALAWS-SSLLSSGSRDKSILQRDIRAQEDFVSKLSG-------HKSEVCGLKWSYDNRELAS 308 (415)
Q Consensus 241 ~~~~~l~----~h~~~V~~l~~~-~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~-------h~~~V~~l~~spdg~~las 308 (415)
+...... .....|.++... ...|..|+. +-|.+||..+.. ...+.. ....|.++...++|++.+.
T Consensus 438 ~~~~~~~~~~~l~~~~v~~i~~d~~g~lwigt~-~Gl~~~~~~~~~--~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWig 514 (795)
T 4a2l_A 438 QVENFNQRNSQLVNENVYAILPDGEGNLWLGTL-SALVRFNPEQRS--FTTIEKEKDGTPVVSKQITTLFRDSHKRLWIG 514 (795)
T ss_dssp CEEEECTTTSCCSCSCEEEEEECSSSCEEEEES-SCEEEEETTTTE--EEECCBCTTCCBCCCCCEEEEEECTTCCEEEE
T ss_pred cEEEeecCCCCcCCCeeEEEEECCCCCEEEEec-CceeEEeCCCCe--EEEccccccccccCCceEEEEEECCCCCEEEE
Confidence 6443222 134578888887 356666666 458899987654 222221 2356899999988887665
Q ss_pred EeCCCcEEEEECCCCceeEEec-------cCCCcEEEEEEcCCCCcEEEEEcCCCCCeEEEEECCCCcEEEEee-----C
Q 014934 309 GGNDNRLFVWNQHSTQPVLKYC-------EHTAAVKAIAWSPHLHGLLASGGGTADRCIRFWNTTTNTHLSCMD-----T 376 (415)
Q Consensus 309 g~~dg~I~iwd~~~~~~~~~~~-------~h~~~V~~l~~sp~~~~llasggg~~d~~I~iwd~~t~~~~~~~~-----~ 376 (415)
.. +-|..||..+++. .+. .....|.++...++|. +.++. .. -|..||..+++.. .+. .
T Consensus 515 t~--~Gl~~~~~~~~~~--~~~~~~~~~~l~~~~i~~i~~d~~g~-lWigT---~~-Gl~~~d~~~~~~~-~~~~~~gl~ 584 (795)
T 4a2l_A 515 GE--EGLSVFKQEGLDI--QKASILPVSNVTKLFTNCIYEASNGI-IWVGT---RE-GFYCFNEKDKQIK-RYNTTNGLP 584 (795)
T ss_dssp ES--SCEEEEEEETTEE--EECCCSCSCGGGGSCEEEEEECTTSC-EEEEE---SS-CEEEEETTTTEEE-EECGGGTCS
T ss_pred eC--CceEEEeCCCCeE--EEecCCCCCCCCCCeeEEEEECCCCC-EEEEe---CC-CceeECCCCCcEE-EeCCCCCCc
Confidence 54 4588999877654 332 1345789999998887 55543 23 6888998877543 332 2
Q ss_pred CCCEEEEEECCCCCeEEEEEecCCCcEEEEECCC
Q 014934 377 GSQVCNLVWSKNVNELVSTHGYSQNQIIVWRYPT 410 (415)
Q Consensus 377 ~~~V~~l~~s~~~~~l~s~~g~~dg~I~vw~~~s 410 (415)
...|.++...++|+..+++ ++-|..|+..+
T Consensus 585 ~~~i~~i~~d~~g~lWi~t----~~Gl~~~~~~~ 614 (795)
T 4a2l_A 585 NNVVYGILEDSFGRLWLST----NRGISCFNPET 614 (795)
T ss_dssp CSCEEEEEECTTSCEEEEE----TTEEEEEETTT
T ss_pred hhheEEEEECCCCCEEEEc----CCceEEEcCCC
Confidence 3568999999999877763 34566777554
No 260
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.54 E-value=1.9e-05 Score=74.12 Aligned_cols=181 Identities=10% Similarity=0.007 Sum_probs=120.8
Q ss_pred CCeEEEEEcCCCCeEEEEECCCcEEEEECCCCeeeEEecC--------------------CCccEEEEEeeC--CEEEEE
Q 014934 209 DSVCSVGWANRNTHLAVGTSHGKVQIWDASRCKRVRTMEG--------------------HRLRVGALAWSS--SLLSSG 266 (415)
Q Consensus 209 ~~V~~v~~sp~g~~la~g~~dg~V~iwd~~~~~~~~~l~~--------------------h~~~V~~l~~~~--~~l~sg 266 (415)
....+++|.++|+++.++..++.|..||..+++.. .+.. ....+..+++.+ ..|+.+
T Consensus 19 ~~p~~i~~d~~g~~l~v~~~~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~l~v~ 97 (322)
T 2fp8_A 19 YAPNSFTFDSTNKGFYTSVQDGRVIKYEGPNSGFV-DFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQLYIV 97 (322)
T ss_dssp SCCCCEECCTTCSSEEEECTTSEEEEECCTTTCEE-EEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTEEEEE
T ss_pred CCceEEEEcCCCCEEEEEcCCCeEEEECCCCCceE-EEecccccccccccccccchhccccCCCCceEEEcCCCCcEEEE
Confidence 34677889999998888889999999998765432 2210 013578888873 677777
Q ss_pred eCCCcEEEEECCCCCccEEEec----c-ccCCeEEEEEeC-CCCEEEEEeC-----------------CCcEEEEECCCC
Q 014934 267 SRDKSILQRDIRAQEDFVSKLS----G-HKSEVCGLKWSY-DNRELASGGN-----------------DNRLFVWNQHST 323 (415)
Q Consensus 267 s~dg~I~iwd~~~~~~~~~~~~----~-h~~~V~~l~~sp-dg~~lasg~~-----------------dg~I~iwd~~~~ 323 (415)
...+.|..+|...+. +..+. + .......+++.+ +|++.++-.. ++.|..||..++
T Consensus 98 d~~~~i~~~d~~~g~--~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~ 175 (322)
T 2fp8_A 98 DCYYHLSVVGSEGGH--ATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTK 175 (322)
T ss_dssp ETTTEEEEECTTCEE--CEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTT
T ss_pred ECCCCEEEEeCCCCE--EEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCC
Confidence 666668888876543 12221 1 113478899999 9987776432 367999998776
Q ss_pred ceeEEeccCCCcEEEEEEcCCCCcEEEEEcCCCCCeEEEEECCCC---cEEEEeeCCCCEEEEEECCCCCeEEEEE
Q 014934 324 QPVLKYCEHTAAVKAIAWSPHLHGLLASGGGTADRCIRFWNTTTN---THLSCMDTGSQVCNLVWSKNVNELVSTH 396 (415)
Q Consensus 324 ~~~~~~~~h~~~V~~l~~sp~~~~llasggg~~d~~I~iwd~~t~---~~~~~~~~~~~V~~l~~s~~~~~l~s~~ 396 (415)
+..... ..-.....|+|+|++..++++-. ..+.|..|++... .......... ...++++++|+.+++..
T Consensus 176 ~~~~~~-~~~~~p~gia~~~dg~~lyv~d~--~~~~I~~~~~~~~~~~~~~~~~~~~g-P~gi~~d~~G~l~va~~ 247 (322)
T 2fp8_A 176 ETTLLL-KELHVPGGAEVSADSSFVLVAEF--LSHQIVKYWLEGPKKGTAEVLVKIPN-PGNIKRNADGHFWVSSS 247 (322)
T ss_dssp EEEEEE-EEESCCCEEEECTTSSEEEEEEG--GGTEEEEEESSSTTTTCEEEEEECSS-EEEEEECTTSCEEEEEE
T ss_pred EEEEec-cCCccCcceEECCCCCEEEEEeC--CCCeEEEEECCCCcCCccceEEeCCC-CCCeEECCCCCEEEEec
Confidence 543222 22234567999999987777755 5789999998752 2111112223 78899999998777753
No 261
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.49 E-value=0.00013 Score=66.23 Aligned_cols=195 Identities=13% Similarity=0.175 Sum_probs=130.8
Q ss_pred CCCCCeEEEEEcCCCC-eEEEEECCCcEEEEECCCCeeeEEec-CCCccEEEEEeeC--CEEEEEeCCCcEEEEECCCCC
Q 014934 206 GIDDSVCSVGWANRNT-HLAVGTSHGKVQIWDASRCKRVRTME-GHRLRVGALAWSS--SLLSSGSRDKSILQRDIRAQE 281 (415)
Q Consensus 206 ~~~~~V~~v~~sp~g~-~la~g~~dg~V~iwd~~~~~~~~~l~-~h~~~V~~l~~~~--~~l~sgs~dg~I~iwd~~~~~ 281 (415)
+-.+.+..++|.|++. ++++...++.|...|.. ++.++.+. +.....-.|++.+ .++++.-.++.+.++++....
T Consensus 24 g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v~~~~ 102 (255)
T 3qqz_A 24 GITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYVISLTPNS 102 (255)
T ss_dssp TCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSSCSSEEEEEECSTTEEEEEETTTTEEEEEEECTTC
T ss_pred CcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCCCChHHeEEeCCCEEEEEECCCCcEEEEEcCCCC
Confidence 3446799999999766 55557788899999998 88777764 2235577788763 344555567789999887654
Q ss_pred c--cEEEec------cccCCeEEEEEeCCCCEEEEEeCCCcEEEEECC---CCceeEEec-------cCCCcEEEEEEcC
Q 014934 282 D--FVSKLS------GHKSEVCGLKWSYDNRELASGGNDNRLFVWNQH---STQPVLKYC-------EHTAAVKAIAWSP 343 (415)
Q Consensus 282 ~--~~~~~~------~h~~~V~~l~~spdg~~lasg~~dg~I~iwd~~---~~~~~~~~~-------~h~~~V~~l~~sp 343 (415)
. .+.... .......+|+|+|.++.|.++.......||.+. ....+..+. .+...+.+++++|
T Consensus 103 ~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l~~dp 182 (255)
T 3qqz_A 103 EVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGAEFNQ 182 (255)
T ss_dssp CEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCEEEEET
T ss_pred eeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccccCCceeEEEcC
Confidence 2 112221 234457899999998777776655444444442 111222221 1344678999999
Q ss_pred CCCcEEEEEcCCCCCeEEEEECCCCcEEEEeeCC----------CCEEEEEECCCCCeEEEEEecCCCcEEEEE
Q 014934 344 HLHGLLASGGGTADRCIRFWNTTTNTHLSCMDTG----------SQVCNLVWSKNVNELVSTHGYSQNQIIVWR 407 (415)
Q Consensus 344 ~~~~llasggg~~d~~I~iwd~~t~~~~~~~~~~----------~~V~~l~~s~~~~~l~s~~g~~dg~I~vw~ 407 (415)
....+++.+. ..+.|.++|.. |+.+..+.-. .+.-+++|.++|+..++ ++.|.++++.
T Consensus 183 ~tg~lliLS~--~s~~L~~~d~~-g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~lyIv---sE~n~~y~f~ 250 (255)
T 3qqz_A 183 QKNTLLVLSH--ESRALQEVTLV-GEVIGEMSLTKGSRGLSHNIKQAEGVAMDASGNIYIV---SEPNRFYRFT 250 (255)
T ss_dssp TTTEEEEEET--TTTEEEEECTT-CCEEEEEECSTTGGGCSSCCCSEEEEEECTTCCEEEE---ETTTEEEEEE
T ss_pred CCCeEEEEEC--CCCeEEEEcCC-CCEEEEEEcCCccCCcccccCCCCeeEECCCCCEEEE---cCCceEEEEE
Confidence 9888888887 78999999966 6666655421 37899999999986665 3566666654
No 262
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=98.48 E-value=2.4e-05 Score=80.11 Aligned_cols=229 Identities=13% Similarity=0.063 Sum_probs=140.7
Q ss_pred EEEEEcCCeEEEEECCCCCeEEeEecCCC---CCeEE-EEEcCCCCeEEEEE------CCCcEEEEECCCCeeeEEecCC
Q 014934 180 VLAVGLGNCVYLWNACSSKVTKLCDLGID---DSVCS-VGWANRNTHLAVGT------SHGKVQIWDASRCKRVRTMEGH 249 (415)
Q Consensus 180 ~la~~~d~~V~iwd~~~~~~~~~~~~~~~---~~V~~-v~~sp~g~~la~g~------~dg~V~iwd~~~~~~~~~l~~h 249 (415)
+++.+.++.|+-+|..+|+..-....... ..+++ -.+ .++ .+++++ .+|.|.-+|..+++.+-.+...
T Consensus 124 V~v~t~dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~ssP~v-~~g-~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~~~ 201 (599)
T 1w6s_A 124 ILKTQLDGNVAALNAETGETVWKVENSDIKVGSTLTIAPYV-VKD-KVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYAT 201 (599)
T ss_dssp EEEECTTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEE-ETT-EEEECCBCGGGTCCCEEEEEETTTCCEEEEEESS
T ss_pred EEEEcCCCEEEEEECCCCCEEEeecCCCCCccceeecCCEE-ECC-EEEEEecccccCCCCeEEEEECCCCcEEEEEcCC
Confidence 55555789999999999998766554220 01221 011 134 556665 3799999999999887655422
Q ss_pred Ccc-------------------------------------E-EEEEee--CCEEEEEeCC----------------CcEE
Q 014934 250 RLR-------------------------------------V-GALAWS--SSLLSSGSRD----------------KSIL 273 (415)
Q Consensus 250 ~~~-------------------------------------V-~~l~~~--~~~l~sgs~d----------------g~I~ 273 (415)
... + ..+++. .++++.+..+ +.|.
T Consensus 202 ~~~~~~~~~p~~~~~~~~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~ 281 (599)
T 1w6s_A 202 GPDKDLLLASDFNIKNPHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIF 281 (599)
T ss_dssp SCHHHHTBCTTTTTTCGGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEE
T ss_pred CCccccccccccccccccccccccccccCCCcceecCCCccccceeEeCCCCEEEEeCCCCccccCcccCCCccccceEE
Confidence 111 0 012232 4567777655 3799
Q ss_pred EEECCCCCccEEEec-c-cc--------CCeEEEEEe-CCC---CEEEEEeCCCcEEEEECCCCceeEEeccCC------
Q 014934 274 QRDIRAQEDFVSKLS-G-HK--------SEVCGLKWS-YDN---RELASGGNDNRLFVWNQHSTQPVLKYCEHT------ 333 (415)
Q Consensus 274 iwd~~~~~~~~~~~~-~-h~--------~~V~~l~~s-pdg---~~lasg~~dg~I~iwd~~~~~~~~~~~~h~------ 333 (415)
.+|.++++. +-.++ . |. .++. +... .+| ..++.++.+|.++++|.++++.+.......
T Consensus 282 Ald~~TG~~-~W~~q~~~~d~wd~d~~~~p~l-~d~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~~~~ 359 (599)
T 1w6s_A 282 GRDADTGEA-KFGYQKTPHDEWDYAGVNVMML-SEQKDKDGKARKLLTHPDRNGIVYTLDRTDGALVSANKLDDTVNVFK 359 (599)
T ss_dssp EEETTTCCE-EEEEESSTTCSSCCCCCCCCEE-EEEECTTSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEE
T ss_pred EEeCCCCce-eeEeecCCCccccccCCCccEE-EeccccCCcEEEEEEEECCCcEEEEEECCCCCEeecccccCCccccc
Confidence 999999874 33332 2 21 1221 2222 567 467788999999999999999887664211
Q ss_pred -------CcE--------------------------EEEEEcCCCCcEEEEEc---------------------------
Q 014934 334 -------AAV--------------------------KAIAWSPHLHGLLASGG--------------------------- 353 (415)
Q Consensus 334 -------~~V--------------------------~~l~~sp~~~~llasgg--------------------------- 353 (415)
..+ ..++++|+...+++...
T Consensus 360 ~~~~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~ 439 (599)
T 1w6s_A 360 SVDLKTGQPVRDPEYGTRMDHLAKDICPSAMGYHNQGHDSYDPKRELFFMGINHICMDWEPFMLPYKAGQFFVGATLNMY 439 (599)
T ss_dssp EECTTTCCEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEE
T ss_pred ccccCCCceeeccccCCCCCCCccEeccCcccccCCCCccCCCCCCEEEEeccccceeeecccccccCCcceecccceec
Confidence 111 13456666553333210
Q ss_pred ---CC------CCCeEEEEECCCCcEEEEeeCCCCEEEEEECCCCCeEEEEEecCCCcEEEEECCCCccc
Q 014934 354 ---GT------ADRCIRFWNTTTNTHLSCMDTGSQVCNLVWSKNVNELVSTHGYSQNQIIVWRYPTMSKV 414 (415)
Q Consensus 354 ---g~------~d~~I~iwd~~t~~~~~~~~~~~~V~~l~~s~~~~~l~s~~g~~dg~I~vw~~~s~~~l 414 (415)
.. .++.|.-||+.+|+.+.....+.++..-.....+..++. |..|+.|+.||..+++.+
T Consensus 440 ~~p~~~~~~~~~~G~l~A~D~~tG~~~W~~~~~~~~~~g~~~tagg~vf~--gt~dg~l~A~D~~tG~~l 507 (599)
T 1w6s_A 440 PGPKGDRQNYEGLGQIKAYNAITGDYKWEKMERFAVWGGTMATAGDLVFY--GTLDGYLKARDSDTGDLL 507 (599)
T ss_dssp ECTTSBTTTTBCCEEEEEECTTTCCEEEEEEESSCCCSBCEEETTTEEEE--ECTTSEEEEEETTTCCEE
T ss_pred cCCcCCcccCCCcCeEEEEECCCCCEEeEecCCCCccCcceEecCCEEEE--ECCCCeEEEEECCCCCEE
Confidence 01 247899999999999888765443332222234566666 678999999999998764
No 263
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.48 E-value=1.2e-06 Score=84.22 Aligned_cols=203 Identities=11% Similarity=0.002 Sum_probs=130.2
Q ss_pred EeecCC-CcEEEEEc---CCeEEE--EECCCCCeEEeEecCCCCCeEEEEEcCCCC-eEEEEECCCcEEEEECCC-----
Q 014934 172 LVDWSS-HNVLAVGL---GNCVYL--WNACSSKVTKLCDLGIDDSVCSVGWANRNT-HLAVGTSHGKVQIWDASR----- 239 (415)
Q Consensus 172 ~l~ws~-~~~la~~~---d~~V~i--wd~~~~~~~~~~~~~~~~~V~~v~~sp~g~-~la~g~~dg~V~iwd~~~----- 239 (415)
.+.++| ++.|.++. ++.|.+ +|..+ ...+..+. . +.+.|+|+ .+++.+.||.+.+.|+.+
T Consensus 128 ~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t---v~~i~v~~--~---~~~~p~g~~~~~~~~~dg~~~~vd~~~~~~~~ 199 (368)
T 1mda_H 128 IIGNCASSACLLFFLFGSSAAAGLSVPGASD---DQLTKSAS--C---FHIHPGAAATHYLGSCPASLAASDLAAAPAAA 199 (368)
T ss_dssp SEEECTTSSCEEEEECSSSCEEEEEETTTEE---EEEEECSS--C---CCCEEEETTEEECCCCTTSCEEEECCSSCCCC
T ss_pred eEEEcCCCCEEEEEccCCCCeEEEEEEchhh---ceEEECCC--c---eEEccCCCeEEEEEcCCCCEEEEECccccccC
Confidence 567888 66666663 357888 88877 33443321 1 22345553 344456788888888876
Q ss_pred CeeeEE----ecCCCccEEEEEeeCCEEEEEeCCCcEEEEECCCCCc-cEEEecc-------c---cCCeEEEEEeCCCC
Q 014934 240 CKRVRT----MEGHRLRVGALAWSSSLLSSGSRDKSILQRDIRAQED-FVSKLSG-------H---KSEVCGLKWSYDNR 304 (415)
Q Consensus 240 ~~~~~~----l~~h~~~V~~l~~~~~~l~sgs~dg~I~iwd~~~~~~-~~~~~~~-------h---~~~V~~l~~spdg~ 304 (415)
++.+.. +.-...+. . ...+..++..+. +.+.+.|+..... .+..+.- + ......++++||++
T Consensus 200 ~~v~~~~t~~i~vg~~P~-~-~~~~~~~~~vs~-~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~v~~s~dg~ 276 (368)
T 1mda_H 200 GIVGAQCTGAQNCSSQAA-Q-ANYPGMLVWAVA-SSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTD 276 (368)
T ss_dssp EECCCCSCTTSCBCSCCE-E-ETTTTEEEECBS-SCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEEEETTTT
T ss_pred CeEEEEeeeeeeCCCCcc-c-cccCCEEEEEcC-CEEEEEECCCCcceEEEEEEeccccccccccccCcceeeEEcCCCC
Confidence 433211 11112233 2 222455555556 8999999875431 1111110 0 11122268999999
Q ss_pred EEEEEeC---------CCcEEEEECCCCceeEEeccCCCcEEEEEEcCCCCcEEEEEcCCCCCeEEEEECCCCcEEEEee
Q 014934 305 ELASGGN---------DNRLFVWNQHSTQPVLKYCEHTAAVKAIAWSPHLHGLLASGGGTADRCIRFWNTTTNTHLSCMD 375 (415)
Q Consensus 305 ~lasg~~---------dg~I~iwd~~~~~~~~~~~~h~~~V~~l~~sp~~~~llasggg~~d~~I~iwd~~t~~~~~~~~ 375 (415)
.+.++.. ++.+.++|+.+.+.+.++.... ...+++|+|+++.++++..+ .++.|.++|+.+++.+..+.
T Consensus 277 ~lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv~~i~vg~-~p~gi~~s~Dg~~l~va~~~-~~~~VsVID~~t~kvv~~I~ 354 (368)
T 1mda_H 277 GIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISNGH-DSDAIIAAQDGASDNYANSA-GTEVLDIYDAASDQDQSSVE 354 (368)
T ss_dssp EEEEEEEECSSCTTSCEEEEEEEESSSCCEEECCEEEE-EECEEEECCSSSCEEEEEET-TTTEEEEEESSSCEEEEECC
T ss_pred EEEEEeccccCcccccCCCEEEEECCCCeEEEEEECCC-CcceEEECCCCCEEEEEccC-CCCeEEEEECCCCcEEEEEE
Confidence 8876543 2356699999999888775433 68899999999877777641 28999999999999999999
Q ss_pred CCCCEEEEEECC
Q 014934 376 TGSQVCNLVWSK 387 (415)
Q Consensus 376 ~~~~V~~l~~s~ 387 (415)
.+.....+++.+
T Consensus 355 vg~~P~~i~~~~ 366 (368)
T 1mda_H 355 LDKGPESLSVQN 366 (368)
T ss_dssp CCSCCCEEECCC
T ss_pred CCCCCCEEEeec
Confidence 887777777654
No 264
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.43 E-value=1.8e-05 Score=83.60 Aligned_cols=235 Identities=13% Similarity=0.068 Sum_probs=132.4
Q ss_pred ceeEeecC-C-CcEEEEEcC--C----eEEEEECCCC-CeEEeEecCCCCCeEEEEEcCCCCeEEEEECC-----CcEEE
Q 014934 169 YLNLVDWS-S-HNVLAVGLG--N----CVYLWNACSS-KVTKLCDLGIDDSVCSVGWANRNTHLAVGTSH-----GKVQI 234 (415)
Q Consensus 169 ~i~~l~ws-~-~~~la~~~d--~----~V~iwd~~~~-~~~~~~~~~~~~~V~~v~~sp~g~~la~g~~d-----g~V~i 234 (415)
.+....|| | ++.||.+.+ | .|+++|+.++ +..... + .....++.|+|||+.|+....+ ..|.+
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~-~--~~~~~~~~WspDg~~l~y~~~d~~~~~~~v~~ 251 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADK-V--SGTNGEIVWGPDHTSLFYVTKDETLRENKVWR 251 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCC-E--EEECSCCEECSSTTEEEEEEECTTCCEEEEEE
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCcc-c--cCceeeEEEecCCCEEEEEEECCCCCCCEEEE
Confidence 67889999 8 778887743 2 4999999998 632110 0 1123468899999988887765 25788
Q ss_pred EECCCCe--eeEEec-CCCccEEEEEee--CCEEEEEeC---CCcEEEEECCCCCccE--EEe-ccccCCeEEEEEeCCC
Q 014934 235 WDASRCK--RVRTME-GHRLRVGALAWS--SSLLSSGSR---DKSILQRDIRAQEDFV--SKL-SGHKSEVCGLKWSYDN 303 (415)
Q Consensus 235 wd~~~~~--~~~~l~-~h~~~V~~l~~~--~~~l~sgs~---dg~I~iwd~~~~~~~~--~~~-~~h~~~V~~l~~spdg 303 (415)
+++.++. ....+. ........+.|+ +++|+..+. ...|+++|+.++.... ..+ ........++.|+. |
T Consensus 252 ~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~s~~~~~-g 330 (751)
T 2xe4_A 252 HVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPREKGVRYDVQMHG-T 330 (751)
T ss_dssp EETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCCTTCCEEEEEET-T
T ss_pred EECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCCCCceEEEeeee-C
Confidence 8887653 223332 223446678888 455655442 3468888998753112 333 33344556666554 5
Q ss_pred CEEEE-EeCC----CcEEEEECCCCceeEE-eccCCCc--EEEEEEcCCCCcEEEEEcCCCCCe--EEEEEC-------C
Q 014934 304 RELAS-GGND----NRLFVWNQHSTQPVLK-YCEHTAA--VKAIAWSPHLHGLLASGGGTADRC--IRFWNT-------T 366 (415)
Q Consensus 304 ~~las-g~~d----g~I~iwd~~~~~~~~~-~~~h~~~--V~~l~~sp~~~~llasggg~~d~~--I~iwd~-------~ 366 (415)
+.|+. ...+ ..|.++|+.++..... +..|... +..+.+ .+..++++.. .++. |.++++ .
T Consensus 331 ~~l~~~t~~~~a~~~~L~~~d~~~~~~~~~~li~~~~~~~l~~~~~--~~~~lv~~~~--~~g~~~l~~~dl~~~~~~~~ 406 (751)
T 2xe4_A 331 SHLVILTNEGGAVNHKLLIAPRGQPSDWSHVLVDHSEDVFMESIAV--RSNYLVVAGR--RAGLTRIWTMMADSQDGVFK 406 (751)
T ss_dssp TEEEEEECTTTCTTCEEEEEETTSTTCCCCEEECCCSSEEEEEEEE--CSSEEEEEEE--ETTEEEEEEEECCTTTSCCC
T ss_pred CEEEEEeCCCCCCCcEEEEEcCCCcccceeeEECCCCCcEEEEEEE--ECCEEEEEEE--eCCEEEEEEEeccccccccc
Confidence 55544 4333 3688888865322122 2234443 444555 4556777765 5664 566675 3
Q ss_pred CCcEEEEeeCC--CCEEEEEE----CCCCCeEEEEEecCC--CcEEEEECCCC
Q 014934 367 TNTHLSCMDTG--SQVCNLVW----SKNVNELVSTHGYSQ--NQIIVWRYPTM 411 (415)
Q Consensus 367 t~~~~~~~~~~--~~V~~l~~----s~~~~~l~s~~g~~d--g~I~vw~~~s~ 411 (415)
+++.+..+... ..+..+.+ +.++..++.+..+.. ..+..+++.+.
T Consensus 407 ~g~~~~~l~l~~~~~~~~~~~~~~~~~~~~~l~~~~ss~~~P~~~~~~d~~~~ 459 (751)
T 2xe4_A 407 AGTGLREVVMEEPIFTVHLVESQMLEYEEPTFRMEYSSLATPNTWFDVSPQDH 459 (751)
T ss_dssp TTTCCEECCCCCSSCEEEECGGGCCCTTCSCEEEEEEETTEEEEEEEECTTTC
T ss_pred CCccceEECCCCceeEEEeccCcccCCCCCEEEEEEeCCCCCCEEEEEECCCC
Confidence 44413444322 23444443 456666655433222 35666666554
No 265
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.43 E-value=1.8e-05 Score=80.84 Aligned_cols=207 Identities=10% Similarity=-0.004 Sum_probs=131.3
Q ss_pred CCeEEEEECCCCCeEEeEecCCCC-------------------------------------CeEEEEEcCCCCeEEEEEC
Q 014934 186 GNCVYLWNACSSKVTKLCDLGIDD-------------------------------------SVCSVGWANRNTHLAVGTS 228 (415)
Q Consensus 186 d~~V~iwd~~~~~~~~~~~~~~~~-------------------------------------~V~~v~~sp~g~~la~g~~ 228 (415)
++.|+.+|..+|+..-.+...... ....+++.++...+.+++.
T Consensus 175 ~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~p~~~~~~~~~G~~~~g~~~w~~~~~~~gg~~~w~~~a~d~~~g~vy~~~g 254 (571)
T 2ad6_A 175 RGAVNAFDLKTGELKWRAFATGSDDSVRLAKDFNSANPHYGQFGLGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSG 254 (571)
T ss_dssp CCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGCCSSHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECC
T ss_pred CCEEEEEECCCCcEEEEEccCCCccccccCcccccccccccccccccccCcccceecCCCCeeeeEEEcCCCCeEEEECC
Confidence 579999999999987666532110 0013456666667776664
Q ss_pred C----------------CcEEEEECCCCeeeEEecC--C--------CccEE-EEEeeC---CEEEEEeCCCcEEEEECC
Q 014934 229 H----------------GKVQIWDASRCKRVRTMEG--H--------RLRVG-ALAWSS---SLLSSGSRDKSILQRDIR 278 (415)
Q Consensus 229 d----------------g~V~iwd~~~~~~~~~l~~--h--------~~~V~-~l~~~~---~~l~sgs~dg~I~iwd~~ 278 (415)
+ +.|..+|..+++.+-.++. | ..++. ....++ ..++.++.+|.++++|..
T Consensus 255 ~~~~~~~~~~~gd~~y~~~v~Ald~~tG~~~W~~~~~~~d~~d~~~~~~p~l~~~~~~G~~~~~v~~~~~~G~l~~lD~~ 334 (571)
T 2ad6_A 255 NPAPWNETMRPGDNKWTMTIWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVLTDQPVNGKMTPLLSHIDRNGILYTLNRE 334 (571)
T ss_dssp CCSCSCGGGSCSCCTTTTEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEEETTEEEEEEEEECTTSEEEEEETT
T ss_pred CCccccCCccCCCceeEEEEEEEecCCCcEEEEecCCCCcccccccCCCCEEEecccCCcEEEEEEEeCCCcEEEEEECC
Confidence 2 3599999999988766642 2 12222 222234 357788999999999998
Q ss_pred CCCccEEEec-cc------------cCCe--------------------------EEEEEeCCCCEEEEEe---------
Q 014934 279 AQEDFVSKLS-GH------------KSEV--------------------------CGLKWSYDNRELASGG--------- 310 (415)
Q Consensus 279 ~~~~~~~~~~-~h------------~~~V--------------------------~~l~~spdg~~lasg~--------- 310 (415)
+++. +.... .. ..++ ..++++|+..+|.+..
T Consensus 335 tG~~-~w~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~ 413 (571)
T 2ad6_A 335 NGNL-IVAEKVDPAVNVFKKVDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGVDSYDPESRTLYAGLNHICMDWEP 413 (571)
T ss_dssp TCCE-EEEEESSTTCCSEEEECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEE
T ss_pred CCCE-EeeecccCCccccccccccCCceecccccCCCCCCCceEECCCCccccCCCCceECCCCCEEEEEchhccccccc
Confidence 8873 32221 11 0111 2467888877777653
Q ss_pred ----------------------------CCCcEEEEECCCCceeEEeccCCCcEEEEEEcCCCCcEEEEEcCCCCCeEEE
Q 014934 311 ----------------------------NDNRLFVWNQHSTQPVLKYCEHTAAVKAIAWSPHLHGLLASGGGTADRCIRF 362 (415)
Q Consensus 311 ----------------------------~dg~I~iwd~~~~~~~~~~~~h~~~V~~l~~sp~~~~llasggg~~d~~I~i 362 (415)
.++.|..||+.+++.+.++... ..+....+...+. ++..++ .|+.|+.
T Consensus 414 ~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~l~a~D~~tG~~~W~~~~~-~~~~~~~~~t~gg-~v~~g~--~dg~l~a 489 (571)
T 2ad6_A 414 FMLPYRAGQFFVGATLAMYPGPNGPTKKEMGQIRAFDLTTGKAKWTKWEK-FAAWGGTLYTKGG-LVWYAT--LDGYLKA 489 (571)
T ss_dssp CCCCCCTTSCCCCEEEEEEECTTSTTSCCCEEEEEECTTTCCEEEEEEES-SCCCSBCEEETTT-EEEEEC--TTSEEEE
T ss_pred cccccccCCccccccceeccCccccCCCCCCeEEEEECCCCCEEEEecCC-CCccceeEEECCC-EEEEEc--CCCeEEE
Confidence 3578999999999988887532 2222222222344 444454 7999999
Q ss_pred EECCCCcEEEEeeCCCCEE--EEEECCCCCeEEEEEe
Q 014934 363 WNTTTNTHLSCMDTGSQVC--NLVWSKNVNELVSTHG 397 (415)
Q Consensus 363 wd~~t~~~~~~~~~~~~V~--~l~~s~~~~~l~s~~g 397 (415)
||..+|+.+..+..+..+. -+.+..+|+.++.+..
T Consensus 490 ~D~~tG~~lw~~~~~~~~~~~p~~~~~~G~~yv~~~~ 526 (571)
T 2ad6_A 490 LDNKDGKELWNFKMPSGGIGSPMTYSFKGKQYIGSMY 526 (571)
T ss_dssp EETTTCCEEEEEECSSCCCSCCEEEEETTEEEEEEEE
T ss_pred EECCCCCEEEEEeCCCCcEeeeEEEEECCEEEEEEEC
Confidence 9999999999988654432 2445678876666543
No 266
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=98.43 E-value=0.00055 Score=72.27 Aligned_cols=232 Identities=9% Similarity=-0.078 Sum_probs=146.1
Q ss_pred EeecCCCcEEEEEcCCeEEEEECCCCCeEEeEecCCCCCeEEEEEcCCCCeEE-EEECCCcEEEEECCCC----eeeEEe
Q 014934 172 LVDWSSHNVLAVGLGNCVYLWNACSSKVTKLCDLGIDDSVCSVGWANRNTHLA-VGTSHGKVQIWDASRC----KRVRTM 246 (415)
Q Consensus 172 ~l~ws~~~~la~~~d~~V~iwd~~~~~~~~~~~~~~~~~V~~v~~sp~g~~la-~g~~dg~V~iwd~~~~----~~~~~l 246 (415)
+.+.....+|..+....|+..++...+...+.. ....+..|+|.+.+..|. +-...+.|+.+++... .....+
T Consensus 389 C~~~~~~p~Ll~an~~~Ir~i~l~~~~~~~l~~--~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi 466 (791)
T 3m0c_C 389 CKAVGSIAYLFFTNRHEVRKMTLDRSEYTSLIP--NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVI 466 (791)
T ss_dssp CEETTSCCEEEEECBSSEEEECTTSCCCEEEEC--SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEE
T ss_pred eeecccccccccccccceeEeeccCCcceeeec--CCCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEE
Confidence 334444456777777788888888776655553 346788999998655444 4445678888888642 223333
Q ss_pred cCCCccEEEEEee--C-CEEEEEeCCCcEEEEECCCCCccEEEeccccCCeEEEEEeCCCCEEEEEeC--CCcEEEEECC
Q 014934 247 EGHRLRVGALAWS--S-SLLSSGSRDKSILQRDIRAQEDFVSKLSGHKSEVCGLKWSYDNRELASGGN--DNRLFVWNQH 321 (415)
Q Consensus 247 ~~h~~~V~~l~~~--~-~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~spdg~~lasg~~--dg~I~iwd~~ 321 (415)
.........|+++ + +++++-...+.|.+.++.... ....+........+|+++|.+.+|..... .+.|.+.++.
T Consensus 467 ~~~l~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ldG~~-~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~d 545 (791)
T 3m0c_C 467 SRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVK-RKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLN 545 (791)
T ss_dssp CSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSSS-EEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETT
T ss_pred ecCCCCcceeeeeecCCcEEEEecCCCeEEEEeCCCCe-EEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecC
Confidence 3233344455554 4 455666677899999997654 22233334456889999997666655542 3789999986
Q ss_pred CCceeEEeccCCCcEEEEEEcCCCCcEEEEEcCCCCCeEEEEECCCCcEEEEeeCC---CCEEEEEECCCCCeEEEEEec
Q 014934 322 STQPVLKYCEHTAAVKAIAWSPHLHGLLASGGGTADRCIRFWNTTTNTHLSCMDTG---SQVCNLVWSKNVNELVSTHGY 398 (415)
Q Consensus 322 ~~~~~~~~~~h~~~V~~l~~sp~~~~llasggg~~d~~I~iwd~~t~~~~~~~~~~---~~V~~l~~s~~~~~l~s~~g~ 398 (415)
.......+...-....+|++.+.+..|+++-. ....|...++........+... ....+|++. +..|+.+ -.
T Consensus 546 G~~~~~lv~~~l~~P~GLavD~~~~~LYwaD~--~~~~I~~~d~dG~~~~~v~~~~~~l~~P~glav~--~~~lYwt-D~ 620 (791)
T 3m0c_C 546 GVDIYSLVTENIQWPNGITLDLLSGRLYWVDS--KLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVF--EDKVFWT-DI 620 (791)
T ss_dssp SCCEEEEECSSCSCEEEEEEETTTTEEEEEET--TTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEE--TTEEEEE-ET
T ss_pred CCceEEEEeCCCCCceEEEEecCCCeEEEEeC--CCCcEEEEecCCCceEEEecCCCccCCCCEEEEe--CCEEEEE-EC
Confidence 55443344344467899999988887888765 6788999998755444444321 235566663 3455554 45
Q ss_pred CCCcEEEEECCCC
Q 014934 399 SQNQIIVWRYPTM 411 (415)
Q Consensus 399 ~dg~I~vw~~~s~ 411 (415)
..+.|...+..++
T Consensus 621 ~~~~I~~~dk~tG 633 (791)
T 3m0c_C 621 INEAIFSANRLTG 633 (791)
T ss_dssp TTTEEEEEETTTC
T ss_pred CCCEEEEEeCCCC
Confidence 5677777775544
No 267
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=98.42 E-value=8.3e-05 Score=75.98 Aligned_cols=234 Identities=11% Similarity=0.065 Sum_probs=142.4
Q ss_pred CcEEEEEcCCeEEEEECCCCCeEEeEecCCCC---CeE-EEEEcC---CCC-eEEEEEC------CCcEEEEECCCCeee
Q 014934 178 HNVLAVGLGNCVYLWNACSSKVTKLCDLGIDD---SVC-SVGWAN---RNT-HLAVGTS------HGKVQIWDASRCKRV 243 (415)
Q Consensus 178 ~~~la~~~d~~V~iwd~~~~~~~~~~~~~~~~---~V~-~v~~sp---~g~-~la~g~~------dg~V~iwd~~~~~~~ 243 (415)
+.+++...++.|+-+|..+|+..-........ .+. +-.... +|+ .+++++. +|.|.-+|..+++.+
T Consensus 118 ~~v~~~t~dg~l~AlD~~TG~~~W~~~~~~~~~~~~~~~sP~v~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG~~~ 197 (582)
T 1flg_A 118 DKVFFGTLDASVVALNKNTGKVVWKKKFADHGAGYTMTGAPTIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGEEI 197 (582)
T ss_dssp TEEEEEETTTEEEEEESSSCCEEEEEECSCGGGTCBCCSCCEEEECTTTCCEEEEECCBCGGGCCBCEEEEECTTTCCEE
T ss_pred CEEEEEeCCCEEEEEECCCCCEEeeecCCCCCcCcccccCCEEeCCCcCCcEEEEEeccccccCCCCEEEEEECCCCCEE
Confidence 45555567899999999999987666543210 111 111111 233 5666653 789999999999876
Q ss_pred EEecCCCccE-----------------------------------------EEEEee--CCEEEEEeC------------
Q 014934 244 RTMEGHRLRV-----------------------------------------GALAWS--SSLLSSGSR------------ 268 (415)
Q Consensus 244 ~~l~~h~~~V-----------------------------------------~~l~~~--~~~l~sgs~------------ 268 (415)
-........+ ..++++ .++++.+..
T Consensus 198 W~~~~~~~~~~p~~~~~~~~~g~~g~~~w~~~~~~~~g~~~~~~~gGg~~w~~~a~d~~~g~vyv~~gn~~~~~~~~r~~ 277 (582)
T 1flg_A 198 WMRPFVEGHMGRLNGKDSTVTGDVKAPSWPDDRNSPTGKVESWSHGGGAPWQSASFDAETNTIIVGAGNPGPWNTWARTA 277 (582)
T ss_dssp EEEESSTTCEEEETTEEEEESSCTTCTTSCBCTTSTTSBCGGGGGCBCCCCSCCEEETTTTEEEEEECCBSSSCGGGGSC
T ss_pred eecCCCccccccccCcccccccccccccCCCccccccccccccccCCccccCCceEcCCCCEEEEeCCCCCcccCccccc
Confidence 5443211000 012233 256666653
Q ss_pred --------C----CcEEEEECCCCCccEEEec-ccc--------CCeEEEEEe-CCCC---EEEEEeCCCcEEEEECCCC
Q 014934 269 --------D----KSILQRDIRAQEDFVSKLS-GHK--------SEVCGLKWS-YDNR---ELASGGNDNRLFVWNQHST 323 (415)
Q Consensus 269 --------d----g~I~iwd~~~~~~~~~~~~-~h~--------~~V~~l~~s-pdg~---~lasg~~dg~I~iwd~~~~ 323 (415)
| +.|..+|..+++..-+... .|. .++. +... .+|+ .++.++.+|.|+++|..++
T Consensus 278 ~gg~~~~~d~~~~~~v~AlD~~TG~~~W~~q~~~~d~wd~~~~~~p~l-~~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG 356 (582)
T 1flg_A 278 KGGNPHDYDSLYTSGQVGVDPSSGEVKWFYQHTPNDAWDFSGNNELVL-FDYKAKDGKIVKATAHADRNGFFYVVDRSNG 356 (582)
T ss_dssp TTSCSTTCCCTTCSEEEEECTTTCCEEEEEESSTTCCSCCCCCCCCEE-EEEECSSSCEEEEEEEECTTSEEEEEETTTC
T ss_pred CCCcccccCCcccceEEEEeCCCCCEEEEEeCCCCCcccccCCCCcEE-EeeecCCCCEEEEEEEECCCceEEEEECCCC
Confidence 2 5799999999884332222 232 1221 2222 4674 7888999999999999999
Q ss_pred ceeEEeccCC-------------CcE--------------------------------EEEEEcCCCCcEEEEEc-----
Q 014934 324 QPVLKYCEHT-------------AAV--------------------------------KAIAWSPHLHGLLASGG----- 353 (415)
Q Consensus 324 ~~~~~~~~h~-------------~~V--------------------------------~~l~~sp~~~~llasgg----- 353 (415)
+.+..+.... .++ ..++++|+...+++...
T Consensus 357 ~~lw~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~ 436 (582)
T 1flg_A 357 KLQNAFPFVDNITWASHIDLKTGRPVEREGQRPPLPEPGQKHGKAVEVSPPFLGGKNWNPMAYSQDTGLFYVPANHWKED 436 (582)
T ss_dssp CEEEEEESSSCCCSEEEECTTTCCEEECTTCSCCCCCTTCSSCCCEEESSCTTCSSCSSCCEECTTTCCEEEEEECEEEE
T ss_pred CEecccccccCccccccccccCCCEeEccccCCccccccccCCCceEECcCCccccCCCCceECCCCCEEEEechhccee
Confidence 9887764331 000 12456666554444321
Q ss_pred -------------------------CCCCCeEEEEECCCCcEEEEeeCCCCEEEEEECCCCCeEEEEEecCCCcEEEEEC
Q 014934 354 -------------------------GTADRCIRFWNTTTNTHLSCMDTGSQVCNLVWSKNVNELVSTHGYSQNQIIVWRY 408 (415)
Q Consensus 354 -------------------------g~~d~~I~iwd~~t~~~~~~~~~~~~V~~l~~s~~~~~l~s~~g~~dg~I~vw~~ 408 (415)
...++.|.-||+.+|+.+........+..-.....+..++. |..|+.|+.||.
T Consensus 437 ~~~~~~~~~~g~~~~g~~~~~~p~~~~~~G~l~A~D~~tG~~~W~~~~~~~~~~g~~~tagglvf~--g~~dg~l~A~D~ 514 (582)
T 1flg_A 437 YWTEEVSYTKGSAYLGMGFRIKRMYDDHVGSLRAMDPVSGKVVWEHKEHLPLWAGVLATAGNLVFT--GTGDGYFKAFDA 514 (582)
T ss_dssp EEECCCCCCTTSCCCCEEEEEEESCSSCSEEEEEECTTTCCEEEEEEESSCCCSCCEEETTTEEEE--ECTTSEEEEEET
T ss_pred eecccccccCCCceeccceeecCCCCCCcceEEEEECCCCCEEEEecCCCCCcccceEeCCCEEEE--ECCCCcEEEEEC
Confidence 01368899999999999888765544332222224566666 778999999999
Q ss_pred CCCccc
Q 014934 409 PTMSKV 414 (415)
Q Consensus 409 ~s~~~l 414 (415)
.+++.+
T Consensus 515 ~tG~~l 520 (582)
T 1flg_A 515 KSGKEL 520 (582)
T ss_dssp TTCCEE
T ss_pred CCCCEE
Confidence 998865
No 268
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=98.38 E-value=0.00099 Score=68.59 Aligned_cols=228 Identities=7% Similarity=-0.098 Sum_probs=148.6
Q ss_pred CcEEEEEcCCeEEEEECCCCCeEEeEecCCCCCeEEEEEcCCCCeEEEE-ECCCcEEEEECCCCeeeEEecCCCccEEEE
Q 014934 178 HNVLAVGLGNCVYLWNACSSKVTKLCDLGIDDSVCSVGWANRNTHLAVG-TSHGKVQIWDASRCKRVRTMEGHRLRVGAL 256 (415)
Q Consensus 178 ~~~la~~~d~~V~iwd~~~~~~~~~~~~~~~~~V~~v~~sp~g~~la~g-~~dg~V~iwd~~~~~~~~~l~~h~~~V~~l 256 (415)
..+|..+....|+..++.+........+..-..+..|+|++.+..|..+ ..++.|..+++........+.........|
T Consensus 6 ~~~Ll~s~~~~I~~i~l~~~~~~~~~~~~~~~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~~v~~~g~~~P~Gl 85 (628)
T 4a0p_A 6 EAFLLFSRRADIRRISLETNNNNVAIPLTGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLDYPEGM 85 (628)
T ss_dssp CCEEEEEETTEEEEEESSCTTCEEECCCCSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEE
T ss_pred CcEEEEEeCCcEEEEECCCCCcceEEEcCCCCceEEEEEECCCCEEEEEECCCCeEEEEECCCCCcEEEEeCCCCCcceE
Confidence 4567778889999999987765544443334578999999976655544 457889999987543333333222334455
Q ss_pred Eee--C-CEEEEEeCCCcEEEEECCCCCccEEEeccccCCeEEEEEeCCCCEEEEEe--CCCcEEEEECCCCceeEEecc
Q 014934 257 AWS--S-SLLSSGSRDKSILQRDIRAQEDFVSKLSGHKSEVCGLKWSYDNRELASGG--NDNRLFVWNQHSTQPVLKYCE 331 (415)
Q Consensus 257 ~~~--~-~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~spdg~~lasg~--~dg~I~iwd~~~~~~~~~~~~ 331 (415)
+++ + ++.++-...+.|.+.++..... .......-....+|+++|....|.... ..+.|...++........+ .
T Consensus 86 AvD~~~~~LY~tD~~~~~I~v~~~dG~~~-~~l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~~~l~-~ 163 (628)
T 4a0p_A 86 AVDWLGKNLYWADTGTNRIEVSKLDGQHR-QVLVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSERTTLV-P 163 (628)
T ss_dssp EEETTTTEEEEEETTTTEEEEEETTSTTC-EEEECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEE-C
T ss_pred EEEeCCCEEEEEECCCCEEEEEecCCCcE-EEEEeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCceEEEE-C
Confidence 554 4 4555556678899999876542 222323445678999999655555544 3578888888655433333 3
Q ss_pred CCCcEEEEEEcCCCCcEEEEEcCCCCCeEEEEECCCCcEEEEeeCCCCEEEEEECCCCCeEEEEEecCCCcEEEEECCCC
Q 014934 332 HTAAVKAIAWSPHLHGLLASGGGTADRCIRFWNTTTNTHLSCMDTGSQVCNLVWSKNVNELVSTHGYSQNQIIVWRYPTM 411 (415)
Q Consensus 332 h~~~V~~l~~sp~~~~llasggg~~d~~I~iwd~~t~~~~~~~~~~~~V~~l~~s~~~~~l~s~~g~~dg~I~vw~~~s~ 411 (415)
.-.....|++.+++..|+.+-. ..+.|..+|+................++++.. + .|..+ -...+.|...|-.++
T Consensus 164 ~~~~P~GlalD~~~~~LY~aD~--~~~~I~~~d~dG~~~~v~~~~l~~P~glav~~-~-~ly~t-D~~~~~I~~~dk~tg 238 (628)
T 4a0p_A 164 NVGRANGLTIDYAKRRLYWTDL--DTNLIESSNMLGLNREVIADDLPHPFGLTQYQ-D-YIYWT-DWSRRSIERANKTSG 238 (628)
T ss_dssp SCSSEEEEEEETTTTEEEEEET--TTTEEEEEETTSCSCEEEEECCSCEEEEEEET-T-EEEEE-ETTTTEEEEEETTTC
T ss_pred CCCCcceEEEccccCEEEEEEC--CCCEEEEEcCCCCceEEeeccCCCceEEEEEC-C-EEEEe-cCCCCEEEEEECCCC
Confidence 4567899999998887888876 67899999997654422223344567788765 3 44443 455778888886554
Q ss_pred c
Q 014934 412 S 412 (415)
Q Consensus 412 ~ 412 (415)
+
T Consensus 239 ~ 239 (628)
T 4a0p_A 239 Q 239 (628)
T ss_dssp C
T ss_pred C
Confidence 3
No 269
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.38 E-value=0.00022 Score=66.31 Aligned_cols=193 Identities=9% Similarity=0.030 Sum_probs=120.5
Q ss_pred CCCeEEEEEcCCCCeEEEEECCCcEEEEECCCCeeeEEecCCCccEEEEEee--CCEEEEEeCC-C-cEEEEECCCCCcc
Q 014934 208 DDSVCSVGWANRNTHLAVGTSHGKVQIWDASRCKRVRTMEGHRLRVGALAWS--SSLLSSGSRD-K-SILQRDIRAQEDF 283 (415)
Q Consensus 208 ~~~V~~v~~sp~g~~la~g~~dg~V~iwd~~~~~~~~~l~~h~~~V~~l~~~--~~~l~sgs~d-g-~I~iwd~~~~~~~ 283 (415)
.....+++|+++|+++++-..++.|..||.... ....+. ....+..+++. ++++++.... + .|..+|..++. .
T Consensus 31 ~~~pegia~~~~g~lyv~d~~~~~I~~~d~~g~-~~~~~~-~~~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g~-~ 107 (306)
T 2p4o_A 31 NTFLENLASAPDGTIFVTNHEVGEIVSITPDGN-QQIHAT-VEGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGT-V 107 (306)
T ss_dssp TCCEEEEEECTTSCEEEEETTTTEEEEECTTCC-EEEEEE-CSSEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSC-E
T ss_pred CCCcceEEECCCCCEEEEeCCCCeEEEECCCCc-eEEEEe-CCCCceeEEEcCCCcEEEEeccCCcceEEEEcCCCCe-E
Confidence 357889999999997766667889999998753 333333 23568889987 4554444332 2 47777776655 2
Q ss_pred EEEec-cccCCeEEEEEeCCCCEEEEEeCCCcEEEEECCCCce-eEEec---------cCCCcEEEEEEcCCCCcEEEEE
Q 014934 284 VSKLS-GHKSEVCGLKWSYDNRELASGGNDNRLFVWNQHSTQP-VLKYC---------EHTAAVKAIAWSPHLHGLLASG 352 (415)
Q Consensus 284 ~~~~~-~h~~~V~~l~~spdg~~lasg~~dg~I~iwd~~~~~~-~~~~~---------~h~~~V~~l~~sp~~~~llasg 352 (415)
..... .......+++..+++..+++-..++.|+++|..+++. +.... ..-.....| +|++..++++.
T Consensus 108 ~~~~~~~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi--s~dg~~lyv~d 185 (306)
T 2p4o_A 108 ETLLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL--KRFGNFLYVSN 185 (306)
T ss_dssp EEEEECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE--EEETTEEEEEE
T ss_pred EEEEeCCCccccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc--CcCCCEEEEEe
Confidence 21111 1223345666666555555555688999999876532 21111 111234556 78888788887
Q ss_pred cCCCCCeEEEEECCC-CcE--EEEeeCCCCEEEEEECCCCCeEEEEEecCCCcEEEEECC
Q 014934 353 GGTADRCIRFWNTTT-NTH--LSCMDTGSQVCNLVWSKNVNELVSTHGYSQNQIIVWRYP 409 (415)
Q Consensus 353 gg~~d~~I~iwd~~t-~~~--~~~~~~~~~V~~l~~s~~~~~l~s~~g~~dg~I~vw~~~ 409 (415)
. ..+.|..|++.. ++. ...+........++++++|+.+++ ....+.|.+++..
T Consensus 186 ~--~~~~I~~~~~~~~g~~~~~~~~~~~~~P~gi~vd~dG~l~va--~~~~~~V~~~~~~ 241 (306)
T 2p4o_A 186 T--EKMLLLRIPVDSTDKPGEPEIFVEQTNIDDFAFDVEGNLYGA--THIYNSVVRIAPD 241 (306)
T ss_dssp T--TTTEEEEEEBCTTSCBCCCEEEEESCCCSSEEEBTTCCEEEE--CBTTCCEEEECTT
T ss_pred C--CCCEEEEEEeCCCCCCCccEEEeccCCCCCeEECCCCCEEEE--eCCCCeEEEECCC
Confidence 6 688999999874 331 112222234567899999987666 4456789998854
No 270
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=98.35 E-value=0.00011 Score=75.36 Aligned_cols=193 Identities=9% Similarity=0.033 Sum_probs=121.9
Q ss_pred EEEEEc-CCeEEEEEC-CCCCeEEeEecCCCC----------CeEEEEEcCCCCe----EEEEECCCcEEEEECCCCeee
Q 014934 180 VLAVGL-GNCVYLWNA-CSSKVTKLCDLGIDD----------SVCSVGWANRNTH----LAVGTSHGKVQIWDASRCKRV 243 (415)
Q Consensus 180 ~la~~~-d~~V~iwd~-~~~~~~~~~~~~~~~----------~V~~v~~sp~g~~----la~g~~dg~V~iwd~~~~~~~ 243 (415)
+.+++. ++.|+-+|. .+|+..-.+...... ....++++|.+.. |++++.|+.|.-+|..+++.+
T Consensus 65 vyv~~~~~~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t~dg~l~AlDa~TG~~~ 144 (599)
T 1w6s_A 65 MYIHTSFPNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQLDGNVAALNAETGETV 144 (599)
T ss_dssp EEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEECTTSEEEEEETTTCCEE
T ss_pred EEEEeCCCCEEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCCcceeEEEEEcCCCEEEEEECCCCCEE
Confidence 344444 688999999 899987666543211 0123455444444 888899999999999999877
Q ss_pred EEecCCCc----cEE-EEEeeCCEEEEEe------CCCcEEEEECCCCCccEEEeccccC--------------------
Q 014934 244 RTMEGHRL----RVG-ALAWSSSLLSSGS------RDKSILQRDIRAQEDFVSKLSGHKS-------------------- 292 (415)
Q Consensus 244 ~~l~~h~~----~V~-~l~~~~~~l~sgs------~dg~I~iwd~~~~~~~~~~~~~h~~-------------------- 292 (415)
-....... .+. .-...+..+++++ .+|.|+.+|.++++..-........
T Consensus 145 W~~~~~~~~~~~~~~ssP~v~~g~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~~~~~~~~~~~~p~~~~~~~~~g~~~ 224 (599)
T 1w6s_A 145 WKVENSDIKVGSTLTIAPYVVKDKVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYATGPDKDLLLASDFNIKNPHYGQKG 224 (599)
T ss_dssp EEEECCCGGGTCBCCSCCEEETTEEEECCBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGCCTT
T ss_pred EeecCCCCCccceeecCCEEECCEEEEEecccccCCCCeEEEEECCCCcEEEEEcCCCCccccccccccccccccccccc
Confidence 55432210 111 1112345666665 3899999999998743222111100
Q ss_pred ----------------Ce-EEEEEeCCCCEEEEEeCC----------------CcEEEEECCCCceeEEeccCCC-----
Q 014934 293 ----------------EV-CGLKWSYDNRELASGGND----------------NRLFVWNQHSTQPVLKYCEHTA----- 334 (415)
Q Consensus 293 ----------------~V-~~l~~spdg~~lasg~~d----------------g~I~iwd~~~~~~~~~~~~h~~----- 334 (415)
.+ ..+++.++..++..+..+ +.|.-+|.++++.+..++....
T Consensus 225 ~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~Ald~~TG~~~W~~q~~~~d~wd~ 304 (599)
T 1w6s_A 225 LGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIFGRDADTGEAKFGYQKTPHDEWDY 304 (599)
T ss_dssp HHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEEEEETTTCCEEEEEESSTTCSSCC
T ss_pred cccccCCCcceecCCCccccceeEeCCCCEEEEeCCCCccccCcccCCCccccceEEEEeCCCCceeeEeecCCCccccc
Confidence 00 135667777888877665 3799999999999888764221
Q ss_pred -----cEEEEEEc-CCCC--cEEEEEcCCCCCeEEEEECCCCcEEEEee
Q 014934 335 -----AVKAIAWS-PHLH--GLLASGGGTADRCIRFWNTTTNTHLSCMD 375 (415)
Q Consensus 335 -----~V~~l~~s-p~~~--~llasggg~~d~~I~iwd~~t~~~~~~~~ 375 (415)
.+. +... .+|+ .+++.++ .+|.+.++|..+|+.+....
T Consensus 305 d~~~~p~l-~d~~~~~G~~~~~v~~~~--~~G~l~~lD~~tG~~lw~~~ 350 (599)
T 1w6s_A 305 AGVNVMML-SEQKDKDGKARKLLTHPD--RNGIVYTLDRTDGALVSANK 350 (599)
T ss_dssp CCCCCCEE-EEEECTTSCEEEEEEEEC--TTSEEEEEETTTCCEEEEEE
T ss_pred cCCCccEE-EeccccCCcEEEEEEEEC--CCcEEEEEECCCCCEeeccc
Confidence 121 2222 4553 3566555 89999999999999987665
No 271
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=98.31 E-value=0.00057 Score=72.21 Aligned_cols=229 Identities=12% Similarity=0.065 Sum_probs=150.4
Q ss_pred ceeEeecCC-CcEEEEEcCCeEEEEECCCCCeEEeEec--------CCCCCeEEEEEcCCCCeEEEEECCCcEEEEECCC
Q 014934 169 YLNLVDWSS-HNVLAVGLGNCVYLWNACSSKVTKLCDL--------GIDDSVCSVGWANRNTHLAVGTSHGKVQIWDASR 239 (415)
Q Consensus 169 ~i~~l~ws~-~~~la~~~d~~V~iwd~~~~~~~~~~~~--------~~~~~V~~v~~sp~g~~la~g~~dg~V~iwd~~~ 239 (415)
.|.++.... +++-++..++.|..++..++........ -....|.++...++|. |.+|+.++-|..||..+
T Consensus 314 ~v~~i~~D~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~-lWigt~~~Gl~~~~~~~ 392 (781)
T 3v9f_A 314 SARYIFQDSFNNIWIGTWGGGINFISNAPPTFHTWSYSPTQMNESSLSNKVVSSVCDDGQGK-LWIGTDGGGINVFENGK 392 (781)
T ss_dssp CEEEEEECSSCCEEEEEBSSCEEEECSSCCSCEEEC----CCCSSCCSSSCEEEEEECTTSC-EEEEEBSSCEEEEETTE
T ss_pred eEEEEEEeCCCCEEEEecCCeEEEeCCCCCcceeeccCccccccCCCCCcceEEEEEcCCCC-EEEEeCCCcEEEEECCC
Confidence 477777777 5555555588899999887665443210 1235699999888776 55678767799999876
Q ss_pred CeeeEEe---cCCCccEEEEEee-CCEEEEEeCCCcEEEEECCCCCccEEEec---cccCCeEEEEEeCCCCEEEEEeCC
Q 014934 240 CKRVRTM---EGHRLRVGALAWS-SSLLSSGSRDKSILQRDIRAQEDFVSKLS---GHKSEVCGLKWSYDNRELASGGND 312 (415)
Q Consensus 240 ~~~~~~l---~~h~~~V~~l~~~-~~~l~sgs~dg~I~iwd~~~~~~~~~~~~---~h~~~V~~l~~spdg~~lasg~~d 312 (415)
+...... ......|.++... ...|..|+.++-|..+|..++. ...+. .....|.++...++|.+.+ |+.
T Consensus 393 ~~~~~~~~~~~~~~~~v~~i~~d~~g~lWigt~~~Gl~~~~~~~~~--~~~~~~~~~~~~~v~~i~~d~~g~lwi-gt~- 468 (781)
T 3v9f_A 393 RVAIYNKENRELLSNSVLCSLKDSEGNLWFGTYLGNISYYNTRLKK--FQIIELEKNELLDVRVFYEDKNKKIWI-GTH- 468 (781)
T ss_dssp EEEECC-----CCCSBEEEEEECTTSCEEEEETTEEEEEECSSSCE--EEECCSTTTCCCCEEEEEECTTSEEEE-EET-
T ss_pred CeEEEccCCCCCCCcceEEEEECCCCCEEEEeccCCEEEEcCCCCc--EEEeccCCCCCCeEEEEEECCCCCEEE-EEC-
Confidence 4332111 1234678898887 5677778887789999987654 23332 1346799998888776544 455
Q ss_pred CcEEEEECCCCceeEEeccC-----CCcEEEEEEcCCCCcEEEEEcCCCCCeEEEEECCCCcEEEEee-----CCCCEEE
Q 014934 313 NRLFVWNQHSTQPVLKYCEH-----TAAVKAIAWSPHLHGLLASGGGTADRCIRFWNTTTNTHLSCMD-----TGSQVCN 382 (415)
Q Consensus 313 g~I~iwd~~~~~~~~~~~~h-----~~~V~~l~~sp~~~~llasggg~~d~~I~iwd~~t~~~~~~~~-----~~~~V~~ 382 (415)
+-|.+||..+++........ ...|.++...++|. +.+.. .++-|..||..+++.. .+. ....|.+
T Consensus 469 ~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~-lWigt---~~~Gl~~~~~~~~~~~-~~~~~~~l~~~~i~~ 543 (781)
T 3v9f_A 469 AGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGR-FWIGT---FGGGVGIYTPDMQLVR-KFNQYEGFCSNTINQ 543 (781)
T ss_dssp TEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCC-EEEEE---SSSCEEEECTTCCEEE-EECTTTTCSCSCEEE
T ss_pred CceEEEeCCCCeEEecccCcccccccceeEEEEEcCCCC-EEEEE---cCCCEEEEeCCCCeEE-EccCCCCCCCCeeEE
Confidence 45899998876554332222 36789999998887 55433 3345788998776543 332 2356899
Q ss_pred EEECCCCCeEEEEEecCCCcEEEEECCC
Q 014934 383 LVWSKNVNELVSTHGYSQNQIIVWRYPT 410 (415)
Q Consensus 383 l~~s~~~~~l~s~~g~~dg~I~vw~~~s 410 (415)
+...++|...+++ .+|.|..|+..+
T Consensus 544 i~~d~~g~lWi~T---~~Glv~~~d~~~ 568 (781)
T 3v9f_A 544 IYRSSKGQMWLAT---GEGLVCFPSARN 568 (781)
T ss_dssp EEECTTSCEEEEE---TTEEEEESCTTT
T ss_pred EEECCCCCEEEEE---CCCceEEECCCC
Confidence 9999999877763 345447776554
No 272
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.31 E-value=1.2e-05 Score=83.42 Aligned_cols=220 Identities=11% Similarity=0.064 Sum_probs=128.5
Q ss_pred eEEEEECCCCCeEEeEec--CCCCCeEEEEEcCCCCeEEEEEC-CCcEEEEECCCCeeeE--EecCCCccEEEEEe-eCC
Q 014934 188 CVYLWNACSSKVTKLCDL--GIDDSVCSVGWANRNTHLAVGTS-HGKVQIWDASRCKRVR--TMEGHRLRVGALAW-SSS 261 (415)
Q Consensus 188 ~V~iwd~~~~~~~~~~~~--~~~~~V~~v~~sp~g~~la~g~~-dg~V~iwd~~~~~~~~--~l~~h~~~V~~l~~-~~~ 261 (415)
.+.+||..+++...+... .+.....++++..+|+++++|+. ++.+.+||..+.+-.. .+........++.. ++.
T Consensus 220 ~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~v~~yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~ 299 (656)
T 1k3i_A 220 LTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTSLYDSSSDSWIPGPDMQVARGYQSSATMSDGR 299 (656)
T ss_dssp EEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEEEEEGGGTEEEECCCCSSCCSSCEEEECTTSC
T ss_pred EEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEeCCCCCCceEEecCcCCceeECCCCCccccccceEEecCCe
Confidence 589999999886554433 23344556788899999999984 4579999988764332 22222233344555 578
Q ss_pred EEEEEe-CC-----CcEEEEECCCCCccEEEecc-----ccCCeEEEEEeCCCCEEEEEeCCC---------cEEEEECC
Q 014934 262 LLSSGS-RD-----KSILQRDIRAQEDFVSKLSG-----HKSEVCGLKWSYDNRELASGGNDN---------RLFVWNQH 321 (415)
Q Consensus 262 ~l~sgs-~d-----g~I~iwd~~~~~~~~~~~~~-----h~~~V~~l~~spdg~~lasg~~dg---------~I~iwd~~ 321 (415)
+++.|+ .+ ..+.+||..+.. ...+.. ....-....+..++..++.|+.+| .+..||..
T Consensus 300 iyv~GG~~~~~~~~~~~e~yd~~t~~--W~~~~~~~~~p~~~~~~~~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~ 377 (656)
T 1k3i_A 300 VFTIGGSWSGGVFEKNGEVYSPSSKT--WTSLPNAKVNPMLTADKQGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTS 377 (656)
T ss_dssp EEEECCCCCSSSCCCCEEEEETTTTE--EEEETTSCSGGGCCCCTTGGGTTTCSCCEEECGGGCEEECCSSSEEEEEECS
T ss_pred EEEEeCcccCCcccccceEeCCCCCc--ceeCCCccccccccccccceeecCCceEEEECCCCcEEEecCccceeeeecC
Confidence 888888 44 569999998764 222210 000000011224555556665443 56788887
Q ss_pred CCceeEEeccCC---------CcEEEEEEcCCCCcEEEEEcCCC-C-----C---eEEEEECCCCcEEEEe--e--CCCC
Q 014934 322 STQPVLKYCEHT---------AAVKAIAWSPHLHGLLASGGGTA-D-----R---CIRFWNTTTNTHLSCM--D--TGSQ 379 (415)
Q Consensus 322 ~~~~~~~~~~h~---------~~V~~l~~sp~~~~llasggg~~-d-----~---~I~iwd~~t~~~~~~~--~--~~~~ 379 (415)
+.........+. ..-.++.|...+..+++.||... + . .|.+||..+....... . ....
T Consensus 378 ~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~mp~~R~ 457 (656)
T 1k3i_A 378 GSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSDATTNAHIITLGEPGTSPNTVFASNGLYFART 457 (656)
T ss_dssp TTCEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBSSSSSSBCCCCEEEEECCSTTSCCEEEECTTCCSSCCB
T ss_pred CcceeecCCccccccccCCCCCCCceEeccCCCCeEEEEeCCCCCCCCCcCCcceEEEcCCCCCCCeeEEccCCCCCCcc
Confidence 765443332221 12345556554556888876210 1 1 6888898877654432 1 1111
Q ss_pred EEEEEECCCCCeEEEEEecCC-----------CcEEEEECCCC
Q 014934 380 VCNLVWSKNVNELVSTHGYSQ-----------NQIIVWRYPTM 411 (415)
Q Consensus 380 V~~l~~s~~~~~l~s~~g~~d-----------g~I~vw~~~s~ 411 (415)
-.++...++++.++. |+.+ ..+.+||..+.
T Consensus 458 ~~~~~~l~~g~i~v~--GG~~~~~~~~~~~~~~~v~~ydp~t~ 498 (656)
T 1k3i_A 458 FHTSVVLPDGSTFIT--GGQRRGIPFEDSTPVFTPEIYVPEQD 498 (656)
T ss_dssp SCEEEECTTSCEEEE--CCBSBCCTTCCCSBCCCCEEEEGGGT
T ss_pred cCCeEECCCCCEEEE--CCcccCcCcCCCCcccceEEEcCCCC
Confidence 234567789988888 5432 46889987553
No 273
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=98.30 E-value=0.00025 Score=69.69 Aligned_cols=230 Identities=6% Similarity=-0.006 Sum_probs=133.2
Q ss_pred eeEeecCC---CcEEEEE-cCCeEEEEECCCCCeEEeEecCCCCCeEEEEEcCCCCeEEEEECCC-----cEEEEECCCC
Q 014934 170 LNLVDWSS---HNVLAVG-LGNCVYLWNACSSKVTKLCDLGIDDSVCSVGWANRNTHLAVGTSHG-----KVQIWDASRC 240 (415)
Q Consensus 170 i~~l~ws~---~~~la~~-~d~~V~iwd~~~~~~~~~~~~~~~~~V~~v~~sp~g~~la~g~~dg-----~V~iwd~~~~ 240 (415)
...|+|++ +..|.++ ..+.|+.++..++.+..+. .......+++|+++|+ |.++...+ .+...+....
T Consensus 141 P~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g~v~~~~--~~~~~P~giavd~dG~-lyVad~~~~~~~~gv~~~~~~~~ 217 (433)
T 4hw6_A 141 IWRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQYVDIKT--TNIGQCADVNFTLNGD-MVVVDDQSSDTNTGIYLFTRASG 217 (433)
T ss_dssp CCEEEECTTTTTCEEEEECBTSCEEEEETTTTEEEEEC--CCCSCEEEEEECTTCC-EEEEECCSCTTSEEEEEECGGGT
T ss_pred CceEEEccccCCCEEEEEeCCCCEEEEECCCCEEEEee--cCCCCccEEEECCCCC-EEEEcCCCCcccceEEEEECCCC
Confidence 45778886 2444444 4488999999888876654 3445789999999999 55544322 1333332211
Q ss_pred ee-eEEecCCCccEEEEEee---CCEEEEEeCCCcEEEEECCCCCccEEEec-cccCCeEEEEEeCCCCEEE-EEeCCCc
Q 014934 241 KR-VRTMEGHRLRVGALAWS---SSLLSSGSRDKSILQRDIRAQEDFVSKLS-GHKSEVCGLKWSYDNRELA-SGGNDNR 314 (415)
Q Consensus 241 ~~-~~~l~~h~~~V~~l~~~---~~~l~sgs~dg~I~iwd~~~~~~~~~~~~-~h~~~V~~l~~spdg~~la-sg~~dg~ 314 (415)
.. ...+. .......++++ +.++++-..++.|+.+|..++......+. +....-..|+|+|+++.|. +-...+.
T Consensus 218 ~~~~~~~~-~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~~~~ 296 (433)
T 4hw6_A 218 FTERLSLC-NARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNGKHC 296 (433)
T ss_dssp TCCEEEEE-ECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETTTTE
T ss_pred eecccccc-ccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCCCCE
Confidence 10 01111 11223345555 34444555677899999875542111111 1122335799999999554 4455688
Q ss_pred EEEEECC--CCce--eEEeccC---------------CCcEEEEEE---------cCCCCcEEEEEcCCCCCeEEEEECC
Q 014934 315 LFVWNQH--STQP--VLKYCEH---------------TAAVKAIAW---------SPHLHGLLASGGGTADRCIRFWNTT 366 (415)
Q Consensus 315 I~iwd~~--~~~~--~~~~~~h---------------~~~V~~l~~---------sp~~~~llasggg~~d~~I~iwd~~ 366 (415)
|+.++.. ++.. ...+.+. -.....+++ .+++. |+++-. ....|+.++.
T Consensus 297 I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~-lyvaD~--~n~~I~~~~~- 372 (433)
T 4hw6_A 297 IYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYD-FYFCDR--DSHTVRVLTP- 372 (433)
T ss_dssp EEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEE-EEEEET--TTTEEEEECT-
T ss_pred EEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCc-EEEEEC--CCCEEEEECC-
Confidence 9998865 2321 1122121 123577999 56654 777665 5788999985
Q ss_pred CCcEEEEeeCC------------------CCEEEEEEC-CCCCeEEEEEecCCCcEEEEECC
Q 014934 367 TNTHLSCMDTG------------------SQVCNLVWS-KNVNELVSTHGYSQNQIIVWRYP 409 (415)
Q Consensus 367 t~~~~~~~~~~------------------~~V~~l~~s-~~~~~l~s~~g~~dg~I~vw~~~ 409 (415)
+|........+ .....++++ +++..+++ -...+.|+.++.+
T Consensus 373 ~G~v~t~~G~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVa--D~~n~rIr~i~~e 432 (433)
T 4hw6_A 373 EGRVTTYAGRGNSREWGYVDGELRSQALFNHPTSIAYDMKRKCFYIG--DCDNHRVRKIAPE 432 (433)
T ss_dssp TSEEEEEECCCTTCSSCCBCEETTTTCBCSSEEEEEEETTTTEEEEE--EGGGTEEEEEEEC
T ss_pred CCCEEEEEeCCCCCccccCCCccccccEeCCCcEEEEECCCCEEEEE--eCCCCEEEEEecC
Confidence 56443332211 236789999 66666555 5567788888764
No 274
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=98.30 E-value=0.00033 Score=68.79 Aligned_cols=230 Identities=9% Similarity=0.069 Sum_probs=133.9
Q ss_pred eeEeecCC---CcEEEEEcCCeEEEEECCCCCeEEeEecCCCCCeEEEEEcCCCCeEEEEECC-C----cEEEEECCCCe
Q 014934 170 LNLVDWSS---HNVLAVGLGNCVYLWNACSSKVTKLCDLGIDDSVCSVGWANRNTHLAVGTSH-G----KVQIWDASRCK 241 (415)
Q Consensus 170 i~~l~ws~---~~~la~~~d~~V~iwd~~~~~~~~~~~~~~~~~V~~v~~sp~g~~la~g~~d-g----~V~iwd~~~~~ 241 (415)
...|+|+| +++.++...+.|+.+|..++.+..+.. .......|+|+++|++|.++... + .+.+++. .+.
T Consensus 139 P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v~~~~~--~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~-~g~ 215 (430)
T 3tc9_A 139 AVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYVSTVYS--GLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTR-ESG 215 (430)
T ss_dssp CCEEEEETTEEEEEEEEEBTEEEEEEETTTTEEEEEEC--CCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEG-GGT
T ss_pred CCEEEECCCCCCeEEEEeCCCcEEEEECCCCEEEEEec--CCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeC-CCc
Confidence 45667875 344444444789999998877666553 44678999999999966666542 2 2333443 222
Q ss_pred ee--EEecCCCccEEEEEeeC---CEEEEEeCCCcEEEEECCCCCccEEEeccccCCeEEEEEeCCCCEE-EEEeCCCcE
Q 014934 242 RV--RTMEGHRLRVGALAWSS---SLLSSGSRDKSILQRDIRAQEDFVSKLSGHKSEVCGLKWSYDNREL-ASGGNDNRL 315 (415)
Q Consensus 242 ~~--~~l~~h~~~V~~l~~~~---~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~spdg~~l-asg~~dg~I 315 (415)
.. ..+.. ......+++++ .++++-..++.|..+|............+......+|+|+|+|++| ++-...+.|
T Consensus 216 ~~~~~~l~~-~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~~~~~I 294 (430)
T 3tc9_A 216 FKVITELTK-GQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVVNQHYI 294 (430)
T ss_dssp SCSEEEEEE-CSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEE
T ss_pred eeeeeeecc-CCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEECCCCEE
Confidence 11 22221 12234556653 4555555678899999876542111111122457789999999954 455567889
Q ss_pred EEEECCC--Cce--eEEeccC---------------CCcEE-EEEEc--------CCCCcEEEEEcCCCCCeEEEEECCC
Q 014934 316 FVWNQHS--TQP--VLKYCEH---------------TAAVK-AIAWS--------PHLHGLLASGGGTADRCIRFWNTTT 367 (415)
Q Consensus 316 ~iwd~~~--~~~--~~~~~~h---------------~~~V~-~l~~s--------p~~~~llasggg~~d~~I~iwd~~t 367 (415)
..++... ++. +..+.+. -.... .++.. +++ .|+++-. ....|+.++ .+
T Consensus 295 ~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~~gv~v~~~~y~~~D~~g-~lyvaD~--~n~~I~~i~-~~ 370 (430)
T 3tc9_A 295 LRSDYDWKTKRLTTPYIVCGQQGAKDWVDGVGKKARMHAPRQGTFVKNPAYKGSSDEY-DFYFCDR--ENHCIRILT-PQ 370 (430)
T ss_dssp EEEEEETTTTEECCCEEEEECTTCBCCBCEEGGGCBBSSEEEEEEEECGGGTTSSCCE-EEEEEEG--GGTEEEEEC-TT
T ss_pred EEEeCCcccccccceEEEeccCCCCCCCCCCCcceEeCCCcceEEEccccccccCCCC-eEEEEEC--CCcEEEEEC-CC
Confidence 9987653 211 1222111 01123 45553 234 3666654 577899998 45
Q ss_pred CcEEEEeeC---------C---------CCEEEEEECCC-CCeEEEEEecCCCcEEEEECC
Q 014934 368 NTHLSCMDT---------G---------SQVCNLVWSKN-VNELVSTHGYSQNQIIVWRYP 409 (415)
Q Consensus 368 ~~~~~~~~~---------~---------~~V~~l~~s~~-~~~l~s~~g~~dg~I~vw~~~ 409 (415)
|........ . .....++++++ +..+++ -...+.|+.++.+
T Consensus 371 G~v~~~~g~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVa--D~~n~rIr~i~~e 429 (430)
T 3tc9_A 371 GRVTTFAGRGSNGTSGYNDGDLRQEARFNHPEGIVYDEERECFFIG--DRENRRIRKIGYE 429 (430)
T ss_dssp SEEEEEEECCTTSSSSCBCEETTTTCBCSSEEEEEEETTTTEEEEE--EGGGTEEEEEEEC
T ss_pred CcEEEEEeCCCCCCCcccCCCchhhcEeCCCcEEEEECCCCEEEEE--ECCCCeEEEEccC
Confidence 654433322 0 14789999995 554444 4566788887754
No 275
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.27 E-value=0.0005 Score=62.29 Aligned_cols=196 Identities=7% Similarity=0.080 Sum_probs=125.4
Q ss_pred CCCCCCcceeEeecCC-Cc-EEEEE-cCCeEEEEECCCCCeEEeEecCCCCCeEEEEEcCCCCeEEEEECCCcEEEEECC
Q 014934 162 PALQDDFYLNLVDWSS-HN-VLAVG-LGNCVYLWNACSSKVTKLCDLGIDDSVCSVGWANRNTHLAVGTSHGKVQIWDAS 238 (415)
Q Consensus 162 ~~l~~~~~i~~l~ws~-~~-~la~~-~d~~V~iwd~~~~~~~~~~~~~~~~~V~~v~~sp~g~~la~g~~dg~V~iwd~~ 238 (415)
|.+.++ +..++|+| ++ +.++. .++.|+..|.. +++.+.+.++.....-.|++.+++.++++.-.++.+.++++.
T Consensus 23 ~g~~~~--lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v~ 99 (255)
T 3qqz_A 23 AGITNN--ISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYVISLT 99 (255)
T ss_dssp TTCCSC--EEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSSCSSEEEEEECSTTEEEEEETTTTEEEEEEEC
T ss_pred CCcccC--cceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCCCChHHeEEeCCCEEEEEECCCCcEEEEEcC
Confidence 444443 78999998 44 55555 45789999998 888888776544678899999888776665567789999876
Q ss_pred CCee---eEEec------CCCccEEEEEeeC--CEEEEEeCCCcEEEEECCC--CCccEEEec-------cccCCeEEEE
Q 014934 239 RCKR---VRTME------GHRLRVGALAWSS--SLLSSGSRDKSILQRDIRA--QEDFVSKLS-------GHKSEVCGLK 298 (415)
Q Consensus 239 ~~~~---~~~l~------~h~~~V~~l~~~~--~~l~sgs~dg~I~iwd~~~--~~~~~~~~~-------~h~~~V~~l~ 298 (415)
.... +.... ........|+|++ +.|+++.......+|.+.. ....+..+. .+...+.+++
T Consensus 100 ~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l~ 179 (255)
T 3qqz_A 100 PNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGAE 179 (255)
T ss_dssp TTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCEEE
T ss_pred CCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccccCCceeEE
Confidence 5432 22221 1344568999984 4565555444444444331 111122221 1234678999
Q ss_pred EeCCC-CEEEEEeCCCcEEEEECCCCceeEEeccCC---------CcEEEEEEcCCCCcEEEEEcCCCCCeEEEEEC
Q 014934 299 WSYDN-RELASGGNDNRLFVWNQHSTQPVLKYCEHT---------AAVKAIAWSPHLHGLLASGGGTADRCIRFWNT 365 (415)
Q Consensus 299 ~spdg-~~lasg~~dg~I~iwd~~~~~~~~~~~~h~---------~~V~~l~~sp~~~~llasggg~~d~~I~iwd~ 365 (415)
++|.. .+++....++.|.++|.. ++.+..+.-.. ...-.|+|.++|+ |++++ +.+.++.+.-
T Consensus 180 ~dp~tg~lliLS~~s~~L~~~d~~-g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~-lyIvs---E~n~~y~f~~ 251 (255)
T 3qqz_A 180 FNQQKNTLLVLSHESRALQEVTLV-GEVIGEMSLTKGSRGLSHNIKQAEGVAMDASGN-IYIVS---EPNRFYRFTP 251 (255)
T ss_dssp EETTTTEEEEEETTTTEEEEECTT-CCEEEEEECSTTGGGCSSCCCSEEEEEECTTCC-EEEEE---TTTEEEEEEC
T ss_pred EcCCCCeEEEEECCCCeEEEEcCC-CCEEEEEEcCCccCCcccccCCCCeeEECCCCC-EEEEc---CCceEEEEEe
Confidence 99954 455666777889999975 55555443221 2568899999996 77776 5667776654
No 276
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.25 E-value=0.00089 Score=63.67 Aligned_cols=200 Identities=11% Similarity=-0.002 Sum_probs=128.1
Q ss_pred eeEeecCC-CcEEEEE--cCCeEEEEECCCCCeEEeEecCCCCCeEEEEEcCCCCeE-EEEECCCcEEEEECCCCeeeEE
Q 014934 170 LNLVDWSS-HNVLAVG--LGNCVYLWNACSSKVTKLCDLGIDDSVCSVGWANRNTHL-AVGTSHGKVQIWDASRCKRVRT 245 (415)
Q Consensus 170 i~~l~ws~-~~~la~~--~d~~V~iwd~~~~~~~~~~~~~~~~~V~~v~~sp~g~~l-a~g~~dg~V~iwd~~~~~~~~~ 245 (415)
...++|++ ++.|..+ ..+.|+.++..++....+.. ..-.....+++.+.+..| ++-...+.|.+.++........
T Consensus 75 ~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~-~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l 153 (349)
T 3v64_C 75 AIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVS-TGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVL 153 (349)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEC-SSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEE
T ss_pred eEEEEEeccccEEEEEeccCCceEEEecCCCCceEEEe-CCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceEEE
Confidence 57889986 4544444 35789999998876555543 223456788998755544 4445567899999875433333
Q ss_pred ecCCCccEEEEEeeC--CEE-EEEeCC-CcEEEEECCCCCccEEEeccccCCeEEEEEeCCCCEEEEEe-CCCcEEEEEC
Q 014934 246 MEGHRLRVGALAWSS--SLL-SSGSRD-KSILQRDIRAQEDFVSKLSGHKSEVCGLKWSYDNRELASGG-NDNRLFVWNQ 320 (415)
Q Consensus 246 l~~h~~~V~~l~~~~--~~l-~sgs~d-g~I~iwd~~~~~~~~~~~~~h~~~V~~l~~spdg~~lasg~-~dg~I~iwd~ 320 (415)
+.........+++++ ..| ++-... +.|...++..... .......-....+|+++|++..|..+. ..+.|..+|+
T Consensus 154 ~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~~-~~~~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~ 232 (349)
T 3v64_C 154 LWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGR-RIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANL 232 (349)
T ss_dssp ECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSC-EESCCSSCSCEEEEEEETTTTEEEEEETTTTEEEEEET
T ss_pred EeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCCc-EEEEECCCCCcceEEEeCCCCEEEEEECCCCEEEEEeC
Confidence 333445678888873 444 444444 7788888875442 222222334578999998776665554 5678999998
Q ss_pred CCCceeEEeccCCCcEEEEEEcCCCCcEEEEEcCCCCCeEEEEECCCCcEEEEee
Q 014934 321 HSTQPVLKYCEHTAAVKAIAWSPHLHGLLASGGGTADRCIRFWNTTTNTHLSCMD 375 (415)
Q Consensus 321 ~~~~~~~~~~~h~~~V~~l~~sp~~~~llasggg~~d~~I~iwd~~t~~~~~~~~ 375 (415)
........+........++++. +..++.+.. ..+.|..+|..+|+.+..+.
T Consensus 233 dG~~~~~~~~~~~~~P~giav~--~~~ly~td~--~~~~V~~~~~~~G~~~~~i~ 283 (349)
T 3v64_C 233 DGSHRKAVISQGLPHPFAITVF--EDSLYWTDW--HTKSINSANKFTGKNQEIIR 283 (349)
T ss_dssp TSCSCEEEECSSCSSEEEEEEE--TTEEEEEET--TTTEEEEEETTTCCSCEEEE
T ss_pred CCCceEEEEeCCCCCceEEEEE--CCEEEEecC--CCCeEEEEEccCCCccEEec
Confidence 7544333333344566788883 345777765 67889999977777665554
No 277
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=98.23 E-value=0.00033 Score=66.16 Aligned_cols=182 Identities=12% Similarity=0.180 Sum_probs=121.0
Q ss_pred CCeEEEEECCCcEEEEECCCCeeeEEecCCCccEEEEEeeCC---------EEEEEeC---CCcEEEEECCCCCccEEEe
Q 014934 220 NTHLAVGTSHGKVQIWDASRCKRVRTMEGHRLRVGALAWSSS---------LLSSGSR---DKSILQRDIRAQEDFVSKL 287 (415)
Q Consensus 220 g~~la~g~~dg~V~iwd~~~~~~~~~l~~h~~~V~~l~~~~~---------~l~sgs~---dg~I~iwd~~~~~~~~~~~ 287 (415)
..+++.....+-+.+||+ +++.+..+.. +++..+..-+. ++++..+ +++|.+|++......+..+
T Consensus 40 ~s~ii~t~k~~gL~Vydl-~G~~l~~~~~--g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~l~~i 116 (355)
T 3amr_A 40 NSKLITTNKKSGLVVYSL-DGKMLHSYNT--GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGTLQSM 116 (355)
T ss_dssp GCEEEEEETTTEEEEEET-TSCEEEEECC--SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCCEEEC
T ss_pred ccEEEEEcCCCCEEEEcC-CCcEEEEccC--CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCceeec
Confidence 345555567788999999 7888888864 55666665432 3344444 4789999774222234444
Q ss_pred cc------cc-CCeEEEEE--eCC-CC-EEEEEeCCCcEEEEECC-------CCceeEEeccCCCcEEEEEEcCCCCcEE
Q 014934 288 SG------HK-SEVCGLKW--SYD-NR-ELASGGNDNRLFVWNQH-------STQPVLKYCEHTAAVKAIAWSPHLHGLL 349 (415)
Q Consensus 288 ~~------h~-~~V~~l~~--spd-g~-~lasg~~dg~I~iwd~~-------~~~~~~~~~~h~~~V~~l~~sp~~~~ll 349 (415)
.. .. ..+.++++ +|. +. ++++...+|.+..|++. +.+.+.+|.. ...+-.++..+....|+
T Consensus 117 ~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~l-gsq~EgcvvDd~~g~Ly 195 (355)
T 3amr_A 117 TDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKM-NSQTEGMAADDEYGRLY 195 (355)
T ss_dssp SCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEEC-SSCEEEEEEETTTTEEE
T ss_pred cccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecC-CCCcceEEEcCCCCeEE
Confidence 21 11 56778888 774 44 57778888999999983 3356677743 45688888888777666
Q ss_pred EEEcCCCCCeEEEEECC-----CCcEEEEeeCC---CCEEEEEE--CCCCC-eEEEEEecCCCcEEEEECC
Q 014934 350 ASGGGTADRCIRFWNTT-----TNTHLSCMDTG---SQVCNLVW--SKNVN-ELVSTHGYSQNQIIVWRYP 409 (415)
Q Consensus 350 asggg~~d~~I~iwd~~-----t~~~~~~~~~~---~~V~~l~~--s~~~~-~l~s~~g~~dg~I~vw~~~ 409 (415)
+.- ++.-|..++.. +++.+..+..+ ..+..|++ .++++ +|+++ .-.++.+.||+..
T Consensus 196 v~e---Ed~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivS-sQG~~s~~Vydr~ 262 (355)
T 3amr_A 196 IAE---EDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMAS-SQGNSSYAIYDRQ 262 (355)
T ss_dssp EEE---TTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEE-EGGGTEEEEEESS
T ss_pred Eec---ccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEE-cCCCCEEEEEECC
Confidence 644 67667777755 45566665433 46888887 55666 66664 3456799999986
No 278
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.22 E-value=0.00072 Score=65.25 Aligned_cols=201 Identities=11% Similarity=-0.011 Sum_probs=128.8
Q ss_pred ceeEeecCC-CcEEEEE--cCCeEEEEECCCCCeEEeEecCCCCCeEEEEEcCCCCeE-EEEECCCcEEEEECCCCeeeE
Q 014934 169 YLNLVDWSS-HNVLAVG--LGNCVYLWNACSSKVTKLCDLGIDDSVCSVGWANRNTHL-AVGTSHGKVQIWDASRCKRVR 244 (415)
Q Consensus 169 ~i~~l~ws~-~~~la~~--~d~~V~iwd~~~~~~~~~~~~~~~~~V~~v~~sp~g~~l-a~g~~dg~V~iwd~~~~~~~~ 244 (415)
....++|++ ++.|..+ ..+.|+.++..++....+.. ........+++.+.+..| ++-...+.|.+.++.......
T Consensus 117 ~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~-~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~~~ 195 (386)
T 3v65_B 117 NAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVS-TGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKV 195 (386)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEEC-SSCSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCSCEE
T ss_pred ccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEe-CCCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCceEE
Confidence 367889986 4444444 45789999998876655543 222356778888755544 444456788888886543333
Q ss_pred EecCCCccEEEEEee--CCEEEEE-eCC-CcEEEEECCCCCccEEEeccccCCeEEEEEeCCCCEEEEE-eCCCcEEEEE
Q 014934 245 TMEGHRLRVGALAWS--SSLLSSG-SRD-KSILQRDIRAQEDFVSKLSGHKSEVCGLKWSYDNRELASG-GNDNRLFVWN 319 (415)
Q Consensus 245 ~l~~h~~~V~~l~~~--~~~l~sg-s~d-g~I~iwd~~~~~~~~~~~~~h~~~V~~l~~spdg~~lasg-~~dg~I~iwd 319 (415)
.+.........|+++ +..|+.. ... +.|..+++..... .......-....+|+|+|++..|..+ ...+.|..+|
T Consensus 196 l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~-~~~~~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d 274 (386)
T 3v65_B 196 LLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGR-RIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERAN 274 (386)
T ss_dssp EECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSC-EEEECSSCSCEEEEEEEGGGTEEEEEETTTTEEEEEC
T ss_pred eecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCc-EEEEECCCCCeeeEEEeCCCCEEEEEECCCCEEEEEe
Confidence 344344567888887 3444444 344 6788888876542 22333334457899999876666554 4567899999
Q ss_pred CCCCceeEEeccCCCcEEEEEEcCCCCcEEEEEcCCCCCeEEEEECCCCcEEEEee
Q 014934 320 QHSTQPVLKYCEHTAAVKAIAWSPHLHGLLASGGGTADRCIRFWNTTTNTHLSCMD 375 (415)
Q Consensus 320 ~~~~~~~~~~~~h~~~V~~l~~sp~~~~llasggg~~d~~I~iwd~~t~~~~~~~~ 375 (415)
+........+........+|++. +..++.+.. ..+.|..+|..+|+.+..+.
T Consensus 275 ~dG~~~~~~~~~~~~~P~giav~--~~~ly~td~--~~~~V~~~~~~~G~~~~~i~ 326 (386)
T 3v65_B 275 LDGSHRKAVISQGLPHPFAITVF--EDSLYWTDW--HTKSINSANKFTGKNQEIIR 326 (386)
T ss_dssp TTSCSCEEEECSSCSSEEEEEEE--TTEEEEEET--TTTEEEEEETTTCCSCEEEE
T ss_pred CCCCeeEEEEECCCCCceEEEEE--CCEEEEeeC--CCCeEEEEECCCCcceEEEc
Confidence 87544333343344567788883 335777765 67889999977887666665
No 279
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=98.21 E-value=0.0017 Score=61.06 Aligned_cols=230 Identities=10% Similarity=0.053 Sum_probs=132.7
Q ss_pred CcceeEeecCCCcEEEEEcCCeEEEEECCCCCeEEeEec--CCCCCeEEEEEcCCCCeEEEEECCCcEEEEECCCCeeeE
Q 014934 167 DFYLNLVDWSSHNVLAVGLGNCVYLWNACSSKVTKLCDL--GIDDSVCSVGWANRNTHLAVGTSHGKVQIWDASRCKRVR 244 (415)
Q Consensus 167 ~~~i~~l~ws~~~~la~~~d~~V~iwd~~~~~~~~~~~~--~~~~~V~~v~~sp~g~~la~g~~dg~V~iwd~~~~~~~~ 244 (415)
+..+..|.++++.+++++..+.|+. ..+.++.-..... .....+..+.+.+++..++++ .+|.|.. ....++.-.
T Consensus 79 ~~~~~~i~~~~~~~~~~g~~g~i~~-S~DgG~tW~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~g~v~~-S~DgG~tW~ 155 (327)
T 2xbg_A 79 DYRFNSVSFQGNEGWIVGEPPIMLH-TTDGGQSWSQIPLDPKLPGSPRLIKALGNGSAEMIT-NVGAIYR-TKDSGKNWQ 155 (327)
T ss_dssp CCEEEEEEEETTEEEEEEETTEEEE-ESSTTSSCEECCCCTTCSSCEEEEEEEETTEEEEEE-TTCCEEE-ESSTTSSEE
T ss_pred CccEEEEEecCCeEEEEECCCeEEE-ECCCCCCceECccccCCCCCeEEEEEECCCCEEEEe-CCccEEE-EcCCCCCCE
Confidence 3457788888877778877776655 3344443222221 123467888887777766655 4564422 112232222
Q ss_pred E-ecCCCccEEEEEee-CCEEEEEeCCCcEEEEECCCCCccEEEeccccCCeEEEEEeCCCCEEEEEeCCCcEEEEECCC
Q 014934 245 T-MEGHRLRVGALAWS-SSLLSSGSRDKSILQRDIRAQEDFVSKLSGHKSEVCGLKWSYDNRELASGGNDNRLFVWNQHS 322 (415)
Q Consensus 245 ~-l~~h~~~V~~l~~~-~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~spdg~~lasg~~dg~I~iwd~~~ 322 (415)
. ...+...+..+++. +..++..+.+|.++.-+-..+......-......+..+.+.+++.+++. +.+|.+++.+...
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~g~~G~~~~S~d~gG~tW~~~~~~~~~~~~~~~~~~~g~~~~~-~~~G~~~~s~~D~ 234 (327)
T 2xbg_A 156 ALVQEAIGVMRNLNRSPSGEYVAVSSRGSFYSTWEPGQTAWEPHNRTTSRRLHNMGFTPDGRLWMI-VNGGKIAFSDPDN 234 (327)
T ss_dssp EEECSCCCCEEEEEECTTSCEEEEETTSSEEEEECTTCSSCEEEECCSSSCEEEEEECTTSCEEEE-ETTTEEEEEETTE
T ss_pred EeecCCCcceEEEEEcCCCcEEEEECCCcEEEEeCCCCCceeECCCCCCCccceeEECCCCCEEEE-eCCceEEEecCCC
Confidence 2 23455678888887 3444455566666554322122122222345567889999999876654 5678888775332
Q ss_pred CceeEEec-c---CCCcEEEEEEcCCCCcEEEEEcCCCCCeEEEEECCCCcEEEEeeC----CCCEEEEEECCCCCeEEE
Q 014934 323 TQPVLKYC-E---HTAAVKAIAWSPHLHGLLASGGGTADRCIRFWNTTTNTHLSCMDT----GSQVCNLVWSKNVNELVS 394 (415)
Q Consensus 323 ~~~~~~~~-~---h~~~V~~l~~sp~~~~llasggg~~d~~I~iwd~~t~~~~~~~~~----~~~V~~l~~s~~~~~l~s 394 (415)
++.-..+. . +...+.++++.+++. +++.+. ++.| ++....|+.-..+.. ...+..+.|..++..+++
T Consensus 235 G~tW~~~~~~~~~~~~~~~~v~~~~~~~-~~~~g~---~g~i-~~S~DgG~tW~~~~~~~~~~~~~~~v~~~~~~~~~~~ 309 (327)
T 2xbg_A 235 SENWGELLSPLRRNSVGFLDLAYRTPNE-VWLAGG---AGAL-LCSQDGGQTWQQDVDVKKVPSNFYKILFFSPDQGFIL 309 (327)
T ss_dssp EEEECCCBCTTSSCCSCEEEEEESSSSC-EEEEES---TTCE-EEESSTTSSCEECGGGTTSSSCCCEEEEEETTEEEEE
T ss_pred CCeeEeccCCcccCCcceEEEEecCCCE-EEEEeC---CCeE-EEeCCCCcccEEcCccCCCCCCeEEEEEECCCceEEE
Confidence 33222221 1 234588999998765 777663 6766 556666665555542 356788888766654444
Q ss_pred EEecCCCcEEEEEC
Q 014934 395 THGYSQNQIIVWRY 408 (415)
Q Consensus 395 ~~g~~dg~I~vw~~ 408 (415)
+.+|.|.-++-
T Consensus 310 ---G~~G~i~~~~~ 320 (327)
T 2xbg_A 310 ---GQKGILLRYVT 320 (327)
T ss_dssp ---CSTTEEEEECC
T ss_pred ---cCCceEEEEcC
Confidence 46887776653
No 280
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=98.21 E-value=0.0011 Score=69.97 Aligned_cols=230 Identities=9% Similarity=-0.053 Sum_probs=148.1
Q ss_pred cceeEeecCCCcEEEEEcC-CeEEEEECCCCCeEEeEe-------c------CCCCCeEEEEEcCCCCeEEEEECCCcEE
Q 014934 168 FYLNLVDWSSHNVLAVGLG-NCVYLWNACSSKVTKLCD-------L------GIDDSVCSVGWANRNTHLAVGTSHGKVQ 233 (415)
Q Consensus 168 ~~i~~l~ws~~~~la~~~d-~~V~iwd~~~~~~~~~~~-------~------~~~~~V~~v~~sp~g~~la~g~~dg~V~ 233 (415)
..|.++...++..|-+|.. +.|++++..++....... . -....|.++....+|. |.+|+.++-|.
T Consensus 258 ~~i~~i~~d~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~f~~~~~~~~~~~l~~~~v~~i~~D~~g~-lWigt~~~Gl~ 336 (781)
T 3v9f_A 258 SYIFSIKQLKDNKLWIATELNGIMILDLQQNQFLLPEQIRFEFIREGDNNYSLSNASARYIFQDSFNN-IWIGTWGGGIN 336 (781)
T ss_dssp CCEEEEEECTTSEEEEEESSSCEEEEETTCC---------CEEECBCSSTTSBSSSCEEEEEECSSCC-EEEEEBSSCEE
T ss_pred ceEEEEEECCCCCEEEEeCCCCeEEECCCCCeeeeeeccccccccCCCCCCCCCCCeEEEEEEeCCCC-EEEEecCCeEE
Confidence 3577887777444555544 789999998876543322 0 1235799999988886 66788777799
Q ss_pred EEECCCCeeeEEec---------CCCccEEEEEeeC-CEEEEEeCCCcEEEEECCCCCccEEEe----ccccCCeEEEEE
Q 014934 234 IWDASRCKRVRTME---------GHRLRVGALAWSS-SLLSSGSRDKSILQRDIRAQEDFVSKL----SGHKSEVCGLKW 299 (415)
Q Consensus 234 iwd~~~~~~~~~l~---------~h~~~V~~l~~~~-~~l~sgs~dg~I~iwd~~~~~~~~~~~----~~h~~~V~~l~~ 299 (415)
.++..+........ .....|.++.... ..|..|+.++-|..+|..+.. ...+ ......|.++..
T Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lWigt~~~Gl~~~~~~~~~--~~~~~~~~~~~~~~v~~i~~ 414 (781)
T 3v9f_A 337 FISNAPPTFHTWSYSPTQMNESSLSNKVVSSVCDDGQGKLWIGTDGGGINVFENGKRV--AIYNKENRELLSNSVLCSLK 414 (781)
T ss_dssp EECSSCCSCEEEC----CCCSSCCSSSCEEEEEECTTSCEEEEEBSSCEEEEETTEEE--EECC-----CCCSBEEEEEE
T ss_pred EeCCCCCcceeeccCccccccCCCCCcceEEEEEcCCCCEEEEeCCCcEEEEECCCCe--EEEccCCCCCCCcceEEEEE
Confidence 99987654322110 1235688988873 678888877779999976432 1111 122356889988
Q ss_pred eCCCCEEEEEeCCCcEEEEECCCCceeEEec---cCCCcEEEEEEcCCCCcEEEEEcCCCCCeEEEEECCCCcEEEEeeC
Q 014934 300 SYDNRELASGGNDNRLFVWNQHSTQPVLKYC---EHTAAVKAIAWSPHLHGLLASGGGTADRCIRFWNTTTNTHLSCMDT 376 (415)
Q Consensus 300 spdg~~lasg~~dg~I~iwd~~~~~~~~~~~---~h~~~V~~l~~sp~~~~llasggg~~d~~I~iwd~~t~~~~~~~~~ 376 (415)
.++|.+.+ |+.++-|..+|..+++.. .+. .....|.++...+++. +.+.. . +-|..||..+++.......
T Consensus 415 d~~g~lWi-gt~~~Gl~~~~~~~~~~~-~~~~~~~~~~~v~~i~~d~~g~-lwigt---~-~Gl~~~~~~~~~~~~~~~~ 487 (781)
T 3v9f_A 415 DSEGNLWF-GTYLGNISYYNTRLKKFQ-IIELEKNELLDVRVFYEDKNKK-IWIGT---H-AGVFVIDLASKKVIHHYDT 487 (781)
T ss_dssp CTTSCEEE-EETTEEEEEECSSSCEEE-ECCSTTTCCCCEEEEEECTTSE-EEEEE---T-TEEEEEESSSSSCCEEECT
T ss_pred CCCCCEEE-EeccCCEEEEcCCCCcEE-EeccCCCCCCeEEEEEECCCCC-EEEEE---C-CceEEEeCCCCeEEecccC
Confidence 88877655 666667999998776533 332 1346799998888775 55532 3 5689999887765433221
Q ss_pred ------CCCEEEEEECCCCCeEEEEEecCCCcEEEEECCC
Q 014934 377 ------GSQVCNLVWSKNVNELVSTHGYSQNQIIVWRYPT 410 (415)
Q Consensus 377 ------~~~V~~l~~s~~~~~l~s~~g~~dg~I~vw~~~s 410 (415)
...|.++...++|+..+.+ ..+-|..|+..+
T Consensus 488 ~~~~~~~~~i~~i~~d~~g~lWigt---~~~Gl~~~~~~~ 524 (781)
T 3v9f_A 488 SNSQLLENFVRSIAQDSEGRFWIGT---FGGGVGIYTPDM 524 (781)
T ss_dssp TTSSCSCSCEEEEEECTTCCEEEEE---SSSCEEEECTTC
T ss_pred cccccccceeEEEEEcCCCCEEEEE---cCCCEEEEeCCC
Confidence 3578999999999877763 223466676543
No 281
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=98.21 E-value=0.00036 Score=71.24 Aligned_cols=192 Identities=11% Similarity=0.050 Sum_probs=118.9
Q ss_pred cEEEEEcCCeEEEEECCCCCeEEeEecCCCCCe--------EEEEEcCCCCeEEEEECCCcEEEEECCCCeeeEEecCCC
Q 014934 179 NVLAVGLGNCVYLWNACSSKVTKLCDLGIDDSV--------CSVGWANRNTHLAVGTSHGKVQIWDASRCKRVRTMEGHR 250 (415)
Q Consensus 179 ~~la~~~d~~V~iwd~~~~~~~~~~~~~~~~~V--------~~v~~sp~g~~la~g~~dg~V~iwd~~~~~~~~~l~~h~ 250 (415)
.+++.+.++.|+-+|..+|+..-.+........ ..+.+ .+..+++++.++.|.-+|..+++.+-......
T Consensus 70 ~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~g~a~--~~~~v~~~t~dg~l~AlD~~TG~~~W~~~~~~ 147 (582)
T 1flg_A 70 VIYVTASYSRLFALDAKTGKRLWTYNHRLPDDIRPCCDVVNRGAAI--YGDKVFFGTLDASVVALNKNTGKVVWKKKFAD 147 (582)
T ss_dssp EEEEEETTTEEEEEESSSCCEEEEEECCCCTTCCCSSCSCCCCCEE--ETTEEEEEETTTEEEEEESSSCCEEEEEECSC
T ss_pred EEEEEcCCCCEEEEECCCCcEEEEEcCCCCcccccccccCCCccEE--ECCEEEEEeCCCEEEEEECCCCCEEeeecCCC
Confidence 344444446699999999998766654321110 11222 35678888999999999999998876554221
Q ss_pred c----cEE-EEEeeCC------EEEEEe------CCCcEEEEECCCCCccEEEeccccC---------------------
Q 014934 251 L----RVG-ALAWSSS------LLSSGS------RDKSILQRDIRAQEDFVSKLSGHKS--------------------- 292 (415)
Q Consensus 251 ~----~V~-~l~~~~~------~l~sgs------~dg~I~iwd~~~~~~~~~~~~~h~~--------------------- 292 (415)
. .+. .....+. .+++++ .++.|+-+|..+++..- .......
T Consensus 148 ~~~~~~~~~sP~v~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG~~~W-~~~~~~~~~~p~~~~~~~~~g~~g~~~w 226 (582)
T 1flg_A 148 HGAGYTMTGAPTIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGEEIW-MRPFVEGHMGRLNGKDSTVTGDVKAPSW 226 (582)
T ss_dssp GGGTCBCCSCCEEEECTTTCCEEEEECCBCGGGCCBCEEEEECTTTCCEEE-EEESSTTCEEEETTEEEEESSCTTCTTS
T ss_pred CCcCcccccCCEEeCCCcCCcEEEEEeccccccCCCCEEEEEECCCCCEEe-ecCCCccccccccCcccccccccccccC
Confidence 0 111 1111123 666665 37899999999887432 2211000
Q ss_pred --------------------CeEEEEEeCCCCEEEEEeC--------------------C----CcEEEEECCCCceeEE
Q 014934 293 --------------------EVCGLKWSYDNRELASGGN--------------------D----NRLFVWNQHSTQPVLK 328 (415)
Q Consensus 293 --------------------~V~~l~~spdg~~lasg~~--------------------d----g~I~iwd~~~~~~~~~ 328 (415)
.-..++++|+..++..+.. | +.|.-+|..+++.+..
T Consensus 227 ~~~~~~~~g~~~~~~~gGg~~w~~~a~d~~~g~vyv~~gn~~~~~~~~r~~~gg~~~~~d~~~~~~v~AlD~~TG~~~W~ 306 (582)
T 1flg_A 227 PDDRNSPTGKVESWSHGGGAPWQSASFDAETNTIIVGAGNPGPWNTWARTAKGGNPHDYDSLYTSGQVGVDPSSGEVKWF 306 (582)
T ss_dssp CBCTTSTTSBCGGGGGCBCCCCSCCEEETTTTEEEEEECCBSSSCGGGGSCTTSCSTTCCCTTCSEEEEECTTTCCEEEE
T ss_pred CCccccccccccccccCCccccCCceEcCCCCEEEEeCCCCCcccCcccccCCCcccccCCcccceEEEEeCCCCCEEEE
Confidence 0013566777777776653 2 5799999999999888
Q ss_pred ecc--CC--------CcEEEEEEc-CCCC--cEEEEEcCCCCCeEEEEECCCCcEEEEeeC
Q 014934 329 YCE--HT--------AAVKAIAWS-PHLH--GLLASGGGTADRCIRFWNTTTNTHLSCMDT 376 (415)
Q Consensus 329 ~~~--h~--------~~V~~l~~s-p~~~--~llasggg~~d~~I~iwd~~t~~~~~~~~~ 376 (415)
++. |. ..+. +... .+|+ .+++.++ .+|.++++|..+|+.+..+..
T Consensus 307 ~q~~~~d~wd~~~~~~p~l-~~~~~~~G~~~~~v~~~~--~~G~l~~lD~~tG~~lw~~~~ 364 (582)
T 1flg_A 307 YQHTPNDAWDFSGNNELVL-FDYKAKDGKIVKATAHAD--RNGFFYVVDRSNGKLQNAFPF 364 (582)
T ss_dssp EESSTTCCSCCCCCCCCEE-EEEECSSSCEEEEEEEEC--TTSEEEEEETTTCCEEEEEES
T ss_pred EeCCCCCcccccCCCCcEE-EeeecCCCCEEEEEEEEC--CCceEEEEECCCCCEeccccc
Confidence 753 32 1221 1221 4554 3566665 899999999999999877654
No 282
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=98.20 E-value=0.0042 Score=58.30 Aligned_cols=221 Identities=10% Similarity=0.054 Sum_probs=127.3
Q ss_pred ceeEeecCC-CcEEEEEcCCeEEEEECCCCCeEEeEec---CCCCCeEEEEEcCCCCeEEEEECCCcEEEEECCCCeeeE
Q 014934 169 YLNLVDWSS-HNVLAVGLGNCVYLWNACSSKVTKLCDL---GIDDSVCSVGWANRNTHLAVGTSHGKVQIWDASRCKRVR 244 (415)
Q Consensus 169 ~i~~l~ws~-~~~la~~~d~~V~iwd~~~~~~~~~~~~---~~~~~V~~v~~sp~g~~la~g~~dg~V~iwd~~~~~~~~ 244 (415)
.+..|.+.+ +..++++..+.|+. ....++.-..... .....+.+|.+.+ +..+++ +..|.|.. ....++.-.
T Consensus 37 ~~~~v~~~~~~~~~~~G~~g~i~~-s~DgG~tW~~~~~~~~~~~~~~~~i~~~~-~~~~~~-g~~g~i~~-S~DgG~tW~ 112 (327)
T 2xbg_A 37 TILDMSFIDRHHGWLVGVNATLME-TRDGGQTWEPRTLVLDHSDYRFNSVSFQG-NEGWIV-GEPPIMLH-TTDGGQSWS 112 (327)
T ss_dssp CEEEEEESSSSCEEEEETTTEEEE-ESSTTSSCEECCCCCSCCCCEEEEEEEET-TEEEEE-EETTEEEE-ESSTTSSCE
T ss_pred cEEEEEECCCCcEEEEcCCCeEEE-eCCCCCCCeECCCCCCCCCccEEEEEecC-CeEEEE-ECCCeEEE-ECCCCCCce
Confidence 577888876 77788887777643 3444432222211 1244688999976 444444 45664433 223233323
Q ss_pred Eec---CCCccEEEEEee-CCEEEEEeCCCcEEEEECCCCCccEEEeccccCCeEEEEEeCCCCEEEEEeCCCcEEEEEC
Q 014934 245 TME---GHRLRVGALAWS-SSLLSSGSRDKSILQRDIRAQEDFVSKLSGHKSEVCGLKWSYDNRELASGGNDNRLFVWNQ 320 (415)
Q Consensus 245 ~l~---~h~~~V~~l~~~-~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~spdg~~lasg~~dg~I~iwd~ 320 (415)
.+. .+...+..+.+. +..++.++.+|.|+.- ...+..-......+...+..+.+.+++.+++++...+..+-+|-
T Consensus 113 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~g~v~~S-~DgG~tW~~~~~~~~~~~~~~~~~~~~~~~~~g~~G~~~~S~d~ 191 (327)
T 2xbg_A 113 QIPLDPKLPGSPRLIKALGNGSAEMITNVGAIYRT-KDSGKNWQALVQEAIGVMRNLNRSPSGEYVAVSSRGSFYSTWEP 191 (327)
T ss_dssp ECCCCTTCSSCEEEEEEEETTEEEEEETTCCEEEE-SSTTSSEEEEECSCCCCEEEEEECTTSCEEEEETTSSEEEEECT
T ss_pred ECccccCCCCCeEEEEEECCCCEEEEeCCccEEEE-cCCCCCCEEeecCCCcceEEEEEcCCCcEEEEECCCcEEEEeCC
Confidence 222 234456777765 5555556667765432 22233223333455667899999999988877654443444442
Q ss_pred --CCCceeEEeccCCCcEEEEEEcCCCCcEEEEEcCCCCCeEEEEECCCCcEEEEeeC-----CCCEEEEEECCCCCeEE
Q 014934 321 --HSTQPVLKYCEHTAAVKAIAWSPHLHGLLASGGGTADRCIRFWNTTTNTHLSCMDT-----GSQVCNLVWSKNVNELV 393 (415)
Q Consensus 321 --~~~~~~~~~~~h~~~V~~l~~sp~~~~llasggg~~d~~I~iwd~~t~~~~~~~~~-----~~~V~~l~~s~~~~~l~ 393 (415)
.+.+.+. ......+..+++.+++. +++.+ .++.+++.+...|+....+.. ...+..+.+.+++..++
T Consensus 192 gG~tW~~~~--~~~~~~~~~~~~~~~g~-~~~~~---~~G~~~~s~~D~G~tW~~~~~~~~~~~~~~~~v~~~~~~~~~~ 265 (327)
T 2xbg_A 192 GQTAWEPHN--RTTSRRLHNMGFTPDGR-LWMIV---NGGKIAFSDPDNSENWGELLSPLRRNSVGFLDLAYRTPNEVWL 265 (327)
T ss_dssp TCSSCEEEE--CCSSSCEEEEEECTTSC-EEEEE---TTTEEEEEETTEEEEECCCBCTTSSCCSCEEEEEESSSSCEEE
T ss_pred CCCceeECC--CCCCCccceeEECCCCC-EEEEe---CCceEEEecCCCCCeeEeccCCcccCCcceEEEEecCCCEEEE
Confidence 2333332 24566789999999886 66655 478887765333444333332 23588899998887776
Q ss_pred EEEecCCCcE
Q 014934 394 STHGYSQNQI 403 (415)
Q Consensus 394 s~~g~~dg~I 403 (415)
+ | .++.|
T Consensus 266 ~--g-~~g~i 272 (327)
T 2xbg_A 266 A--G-GAGAL 272 (327)
T ss_dssp E--E-STTCE
T ss_pred E--e-CCCeE
Confidence 6 4 35655
No 283
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.17 E-value=8e-05 Score=78.53 Aligned_cols=192 Identities=11% Similarity=0.058 Sum_probs=113.3
Q ss_pred CeEEEEEc-CCCCeEEEEEC-CC----cEEEEECCCC-eeeEE-ecCCCccEEEEEee--CCEEEEEeCC-----CcEEE
Q 014934 210 SVCSVGWA-NRNTHLAVGTS-HG----KVQIWDASRC-KRVRT-MEGHRLRVGALAWS--SSLLSSGSRD-----KSILQ 274 (415)
Q Consensus 210 ~V~~v~~s-p~g~~la~g~~-dg----~V~iwd~~~~-~~~~~-l~~h~~~V~~l~~~--~~~l~sgs~d-----g~I~i 274 (415)
.+...+|| |||++||.+.. +| .|+++|+.++ +.+.. +. .....++|+ ++.|+....| ..|+.
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~~~---~~~~~~~WspDg~~l~y~~~d~~~~~~~v~~ 251 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADKVS---GTNGEIVWGPDHTSLFYVTKDETLRENKVWR 251 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCCEE---EECSCCEECSSTTEEEEEEECTTCCEEEEEE
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCcccc---CceeeEEEecCCCEEEEEEECCCCCCCEEEE
Confidence 57889999 99999887654 33 4999999988 63211 11 113457887 3466655554 25888
Q ss_pred EECCCCCcc-EEEec-cccCCeEEEEEeCCCCEEEEEe---CCCcEEEEECCCCc-ee--EEec-cCCCcEEEEEEcCCC
Q 014934 275 RDIRAQEDF-VSKLS-GHKSEVCGLKWSYDNRELASGG---NDNRLFVWNQHSTQ-PV--LKYC-EHTAAVKAIAWSPHL 345 (415)
Q Consensus 275 wd~~~~~~~-~~~~~-~h~~~V~~l~~spdg~~lasg~---~dg~I~iwd~~~~~-~~--~~~~-~h~~~V~~l~~sp~~ 345 (415)
+++.+.... ...+. .......++.|+|||++|+... ....|+++|+.++. .. ..+. ........+.|+. +
T Consensus 252 ~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~s~~~~~-g 330 (751)
T 2xe4_A 252 HVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPREKGVRYDVQMHG-T 330 (751)
T ss_dssp EETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCCTTCCEEEEEET-T
T ss_pred EECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCCCCceEEEeeee-C
Confidence 898776422 22222 2233467889999999988755 34479999998762 22 3333 3344556666554 4
Q ss_pred CcEEEEEcC--CCCCeEEEEECCCC-cEEE-EeeCCC--CEEEEEECCCCCeEEEEEecCCCc--EEEEEC
Q 014934 346 HGLLASGGG--TADRCIRFWNTTTN-THLS-CMDTGS--QVCNLVWSKNVNELVSTHGYSQNQ--IIVWRY 408 (415)
Q Consensus 346 ~~llasggg--~~d~~I~iwd~~t~-~~~~-~~~~~~--~V~~l~~s~~~~~l~s~~g~~dg~--I~vw~~ 408 (415)
..+++.... .....|..+|+.++ +... .+.+.. .+..+.+. +..|+.+ ...++. |.++++
T Consensus 331 ~~l~~~t~~~~a~~~~L~~~d~~~~~~~~~~li~~~~~~~l~~~~~~--~~~lv~~-~~~~g~~~l~~~dl 398 (751)
T 2xe4_A 331 SHLVILTNEGGAVNHKLLIAPRGQPSDWSHVLVDHSEDVFMESIAVR--SNYLVVA-GRRAGLTRIWTMMA 398 (751)
T ss_dssp TEEEEEECTTTCTTCEEEEEETTSTTCCCCEEECCCSSEEEEEEEEC--SSEEEEE-EEETTEEEEEEEEC
T ss_pred CEEEEEeCCCCCCCcEEEEEcCCCcccceeeEECCCCCcEEEEEEEE--CCEEEEE-EEeCCEEEEEEEec
Confidence 556665531 12346888888753 2222 233333 34455554 5566654 445664 455554
No 284
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.14 E-value=0.0022 Score=60.01 Aligned_cols=184 Identities=11% Similarity=0.002 Sum_probs=119.2
Q ss_pred eEEEEECCCcEEEEECCCCeeeEEecCCCccEEEEEeeC--C-EEEEEeCCCcEEEEECCCC---CccEEEeccccCCeE
Q 014934 222 HLAVGTSHGKVQIWDASRCKRVRTMEGHRLRVGALAWSS--S-LLSSGSRDKSILQRDIRAQ---EDFVSKLSGHKSEVC 295 (415)
Q Consensus 222 ~la~g~~dg~V~iwd~~~~~~~~~l~~h~~~V~~l~~~~--~-~l~sgs~dg~I~iwd~~~~---~~~~~~~~~h~~~V~ 295 (415)
+|+.+. ...|+..|+...+....+. ....+.+++|++ + ++++-..++.|..+++... ......+...-....
T Consensus 3 ~ll~~~-~~~I~~i~~~~~~~~~~~~-~~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~ 80 (316)
T 1ijq_A 3 YLFFTN-RHEVRKMTLDRSEYTSLIP-NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPD 80 (316)
T ss_dssp EEEEEC-BSSEEEEETTSCCCEEEEC-SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCC
T ss_pred EEEEEC-CCeEEEEECCCcceEehhc-CCCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcC
Confidence 344443 3568999998776555554 345678899983 3 4555556789999998761 212223332334568
Q ss_pred EEEEeCCCC-EEEEEeCCCcEEEEECCCCceeEEeccCCCcEEEEEEcCCCCcEEEEEcCCCCCeEEEEECCCCcEEEEe
Q 014934 296 GLKWSYDNR-ELASGGNDNRLFVWNQHSTQPVLKYCEHTAAVKAIAWSPHLHGLLASGGGTADRCIRFWNTTTNTHLSCM 374 (415)
Q Consensus 296 ~l~~spdg~-~lasg~~dg~I~iwd~~~~~~~~~~~~h~~~V~~l~~sp~~~~llasggg~~d~~I~iwd~~t~~~~~~~ 374 (415)
++++++.+. ++++-...+.|.++|+........+.........+++.|.+..++.+..+ ..+.|...++... ....+
T Consensus 81 glavd~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~-~~~~I~~~~~dG~-~~~~~ 158 (316)
T 1ijq_A 81 GLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWG-TPAKIKKGGLNGV-DIYSL 158 (316)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECS-SSCEEEEEETTSC-CEEEE
T ss_pred EEEEeecCCeEEEEECCCCEEEEEeCCCCceEEEEECCCCCcceEEeCCCCCEEEEEccC-CCCeEEEEcCCCC-CeEEE
Confidence 899997554 44555667899999987554333333344567899999987778887642 2378988888543 33333
Q ss_pred -e-CCCCEEEEEECCCCCeEEEEEecCCCcEEEEECCC
Q 014934 375 -D-TGSQVCNLVWSKNVNELVSTHGYSQNQIIVWRYPT 410 (415)
Q Consensus 375 -~-~~~~V~~l~~s~~~~~l~s~~g~~dg~I~vw~~~s 410 (415)
. .-.....++|++++..|..+ -...+.|..+++..
T Consensus 159 ~~~~~~~P~gla~d~~~~~lY~~-D~~~~~I~~~d~dg 195 (316)
T 1ijq_A 159 VTENIQWPNGITLDLLSGRLYWV-DSKLHSISSIDVNG 195 (316)
T ss_dssp ECSSCSCEEEEEEETTTTEEEEE-ETTTTEEEEEETTS
T ss_pred EECCCCCceEEEEeccCCEEEEE-ECCCCeEEEEecCC
Confidence 2 33567899999988877775 44567899999864
No 285
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=98.11 E-value=1e-05 Score=84.54 Aligned_cols=225 Identities=9% Similarity=-0.067 Sum_probs=134.0
Q ss_pred cEEEEEcCCeEEEEECCCCCeEEeEecCCCCCeEEEEEcCCCCeEEEEE-CCCcEEEEECCC----CeeeEEecCCCccE
Q 014934 179 NVLAVGLGNCVYLWNACSSKVTKLCDLGIDDSVCSVGWANRNTHLAVGT-SHGKVQIWDASR----CKRVRTMEGHRLRV 253 (415)
Q Consensus 179 ~~la~~~d~~V~iwd~~~~~~~~~~~~~~~~~V~~v~~sp~g~~la~g~-~dg~V~iwd~~~----~~~~~~l~~h~~~V 253 (415)
.+|.++....|+..++.+.+...+.. ....+..|+|.+.+..|.... ..+.|+.+++.. ......+.......
T Consensus 378 ~~ll~~~~~~I~~id~~~~~~~~~~~--~~~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P 455 (699)
T 1n7d_A 378 AYLFFTNRHEVRKMTLDRSEYTSLIP--NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAP 455 (699)
T ss_dssp CCBCCCCTTC-CEECTTSCCEECCSC--CCTTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--C
T ss_pred eeEEecCccceEEEeCCCCcceeeec--cCcceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCc
Confidence 44555556788888888777655543 234677899998776666554 457899999875 22222222111223
Q ss_pred EEEEee--C-CEEEEEeCCCcEEEEECCCCCccEEEeccccCCeEEEEEeCCCCEEEEEe-C-CCcEEEEECCCCceeEE
Q 014934 254 GALAWS--S-SLLSSGSRDKSILQRDIRAQEDFVSKLSGHKSEVCGLKWSYDNRELASGG-N-DNRLFVWNQHSTQPVLK 328 (415)
Q Consensus 254 ~~l~~~--~-~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~spdg~~lasg~-~-dg~I~iwd~~~~~~~~~ 328 (415)
..|++. + +++++-...+.|.++++.... ....+........+|+++|.+.+|+... . .+.|.++++........
T Consensus 456 ~glavD~~~g~LY~tD~~~~~I~v~d~dg~~-~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~~~l 534 (699)
T 1n7d_A 456 DGLAVDWIHSNIYWTDSVLGTVSVADTKGVK-RKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSL 534 (699)
T ss_dssp CCEECCCSSSBCEECCTTTSCEEEEBSSSCC-EEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCCCEE
T ss_pred ceEEEEeeCCcEEEEeccCCeEEEEecCCCc-eEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCeeEE
Confidence 445554 3 455555567889999987654 2222222234567899999665555443 2 36888888754332222
Q ss_pred eccCCCcEEEEEEcCCCCcEEEEEcCCCCCeEEEEECCCCcEEEEeeC---CCCEEEEEECCCCCeEEEEEecCCCcEEE
Q 014934 329 YCEHTAAVKAIAWSPHLHGLLASGGGTADRCIRFWNTTTNTHLSCMDT---GSQVCNLVWSKNVNELVSTHGYSQNQIIV 405 (415)
Q Consensus 329 ~~~h~~~V~~l~~sp~~~~llasggg~~d~~I~iwd~~t~~~~~~~~~---~~~V~~l~~s~~~~~l~s~~g~~dg~I~v 405 (415)
+...-.....|+|+|++..|+++-. ..+.|..+++........+.. .....+|++..+ .|+.+ ....+.|..
T Consensus 535 ~~~~l~~PnGlavd~~~~~LY~aD~--~~~~I~~~d~dG~~~~~~~~~~~~~~~P~glavd~~--~lywt-d~~~~~V~~ 609 (699)
T 1n7d_A 535 VTENIQWPNGITLDLLSGRLYWVDS--KLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFED--KVFWT-DIINEAIFS 609 (699)
T ss_dssp SCSSCSSCCCEEECTTTCCEEEEET--TTTEEEEECSSSSCCEEECCCSSSCSSCCCCEEETT--EEEEE-CSTTTCEEE
T ss_pred EeCCCCCccEEEEeccCCEEEEEec--CCCeEEEEccCCCceEEEEecCCcCCCceEeEEECC--EEEEE-eCCCCeEEE
Confidence 2222345678999998888888876 678999999875433322221 123345555443 45443 356678888
Q ss_pred EECCCC
Q 014934 406 WRYPTM 411 (415)
Q Consensus 406 w~~~s~ 411 (415)
++..++
T Consensus 610 ~d~~~G 615 (699)
T 1n7d_A 610 ANRLTG 615 (699)
T ss_dssp EETTTE
T ss_pred EEccCC
Confidence 886544
No 286
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=98.10 E-value=0.0028 Score=59.39 Aligned_cols=200 Identities=11% Similarity=-0.024 Sum_probs=125.5
Q ss_pred eeEeecCC-CcEEE-EE-cCCeEEEEECCCCCeE-EeEecCCCCCeEEEEEcCCCC-eEEEEECCCcEEEEECCCCeeeE
Q 014934 170 LNLVDWSS-HNVLA-VG-LGNCVYLWNACSSKVT-KLCDLGIDDSVCSVGWANRNT-HLAVGTSHGKVQIWDASRCKRVR 244 (415)
Q Consensus 170 i~~l~ws~-~~~la-~~-~d~~V~iwd~~~~~~~-~~~~~~~~~~V~~v~~sp~g~-~la~g~~dg~V~iwd~~~~~~~~ 244 (415)
...++|++ ++.|. +. ..+.|+.++..++... .+.. ..-.....+++.+.+. +.++-...+.|.++++.......
T Consensus 37 ~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~-~~l~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~ 115 (318)
T 3sov_A 37 AAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVV-SGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKV 115 (318)
T ss_dssp EEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEE-ECCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEE
T ss_pred cEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEc-CCCCCccEEEEEcCCCeEEEEECCCCEEEEEECCCCcEEE
Confidence 55788987 44444 44 4578999998776422 2222 1224567888887554 44444556789999986543332
Q ss_pred EecCCCccEEEEEeeC--CEEEEEe--CCCcEEEEECCCCCccEEEeccccCCeEEEEEeCCCCEEEEEe-CCCcEEEEE
Q 014934 245 TMEGHRLRVGALAWSS--SLLSSGS--RDKSILQRDIRAQEDFVSKLSGHKSEVCGLKWSYDNRELASGG-NDNRLFVWN 319 (415)
Q Consensus 245 ~l~~h~~~V~~l~~~~--~~l~sgs--~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~spdg~~lasg~-~dg~I~iwd 319 (415)
.+.........+++++ ..|+... ..+.|...++..... .......-....+|++++++..|..+. ..+.|..+|
T Consensus 116 l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~-~~~~~~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d 194 (318)
T 3sov_A 116 LFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSR-FIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSN 194 (318)
T ss_dssp EECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSC-EEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred EEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCe-EEEEECCCCCccEEEEeccCCEEEEEECCCCEEEEEc
Confidence 3333445677888873 4555554 357888888875432 222222234578999999776665554 567899999
Q ss_pred CCCCceeEEeccCCCcEEEEEEcCCCCcEEEEEcCCCCCeEEEEECCCCcEEEEee
Q 014934 320 QHSTQPVLKYCEHTAAVKAIAWSPHLHGLLASGGGTADRCIRFWNTTTNTHLSCMD 375 (415)
Q Consensus 320 ~~~~~~~~~~~~h~~~V~~l~~sp~~~~llasggg~~d~~I~iwd~~t~~~~~~~~ 375 (415)
+........+.+......++++. +..++.+-. ..+.|..+|..+|+....+.
T Consensus 195 ~dG~~~~~~~~~~~~~P~glav~--~~~lywtd~--~~~~V~~~~~~~G~~~~~i~ 246 (318)
T 3sov_A 195 LDGTNRQAVVKGSLPHPFALTLF--EDILYWTDW--STHSILACNKYTGEGLREIH 246 (318)
T ss_dssp TTSCSCEEEECSCCSCEEEEEEE--TTEEEEEET--TTTEEEEEETTTCCSCEEEE
T ss_pred CCCCceEEEecCCCCCceEEEEe--CCEEEEEec--CCCeEEEEECCCCCceEEEe
Confidence 86543332333344566778875 335777765 67899999998887665554
No 287
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.05 E-value=0.0033 Score=60.88 Aligned_cols=185 Identities=12% Similarity=0.000 Sum_probs=122.9
Q ss_pred eEEEEECCCcEEEEECCCCeeeEEecCCCccEEEEEee--CC-EEEEEeCCCcEEEEECCCCC---ccEEEeccccCCeE
Q 014934 222 HLAVGTSHGKVQIWDASRCKRVRTMEGHRLRVGALAWS--SS-LLSSGSRDKSILQRDIRAQE---DFVSKLSGHKSEVC 295 (415)
Q Consensus 222 ~la~g~~dg~V~iwd~~~~~~~~~l~~h~~~V~~l~~~--~~-~l~sgs~dg~I~iwd~~~~~---~~~~~~~~h~~~V~ 295 (415)
+|+.. ....|+..++........+. ....+..|+|+ .+ ++++-...+.|+.+++.... .....+........
T Consensus 85 ~ll~~-~~~~I~~i~l~~~~~~~~~~-~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~ 162 (400)
T 3p5b_L 85 YLFFT-NRHEVRKMTLDRSEYTSLIP-NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPD 162 (400)
T ss_dssp EEEEE-ETTEEEEECTTSCSCEEEEC-SCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCEE
T ss_pred eeEEe-ccceeEEEccCCcceeEecc-ccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCcc
Confidence 44444 34678888887665444444 45668899998 34 44455567889999987521 12333333445688
Q ss_pred EEEEeCC-CCEEEEEeCCCcEEEEECCCCceeEEeccCCCcEEEEEEcCCCCcEEEEEcCCCCCeEEEEECCCCcEEEEe
Q 014934 296 GLKWSYD-NRELASGGNDNRLFVWNQHSTQPVLKYCEHTAAVKAIAWSPHLHGLLASGGGTADRCIRFWNTTTNTHLSCM 374 (415)
Q Consensus 296 ~l~~spd-g~~lasg~~dg~I~iwd~~~~~~~~~~~~h~~~V~~l~~sp~~~~llasggg~~d~~I~iwd~~t~~~~~~~ 374 (415)
+|++.+. ++++++-...+.|.+.++........+........+|++.|.+..|+.+-.| ..+.|...++........+
T Consensus 163 glavD~~~~~lY~~d~~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~-~~~~I~~~~~dG~~~~~~~ 241 (400)
T 3p5b_L 163 GLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWG-TPAKIKKGGLNGVDIYSLV 241 (400)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEECTTTCSEEEEEECSSCCEEEEEEETTTTEEEEEECS-SSCCEEEEETTSCSCEEEE
T ss_pred cEEEEecCCceEEEECCCCeEEEEeCCCCceEEEEeCCCCCcceEEEecccCeEEEEeCC-CCCEEEEEeCCCCccEEEE
Confidence 9999984 5555555667899999987665544444445568999999987778887642 3478999998755443333
Q ss_pred eC-CCCEEEEEECCCCCeEEEEEecCCCcEEEEECCC
Q 014934 375 DT-GSQVCNLVWSKNVNELVSTHGYSQNQIIVWRYPT 410 (415)
Q Consensus 375 ~~-~~~V~~l~~s~~~~~l~s~~g~~dg~I~vw~~~s 410 (415)
.. -.....|++++++..|..+ -...+.|..+++..
T Consensus 242 ~~~l~~P~glavd~~~~~lY~a-D~~~~~I~~~d~dG 277 (400)
T 3p5b_L 242 TENIQWPNGITLDLLSGRLYWV-DSKLHSISSIDVNG 277 (400)
T ss_dssp CSSCSCEEEEEEETTTTEEEEE-ETTTTEEEEEETTS
T ss_pred ECCCCceEEEEEEeCCCEEEEE-ECCCCEEEEEeCCC
Confidence 33 3578899999988888775 34567899988864
No 288
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=98.03 E-value=0.0035 Score=64.37 Aligned_cols=228 Identities=9% Similarity=-0.018 Sum_probs=136.5
Q ss_pred cEEEEEcCCeEEEEECCCCCeEEeEecCCCCCeEEEEEcCCCCeEEEEEC-CCcEEEEECCCCee-eEEecCCCccEEEE
Q 014934 179 NVLAVGLGNCVYLWNACSSKVTKLCDLGIDDSVCSVGWANRNTHLAVGTS-HGKVQIWDASRCKR-VRTMEGHRLRVGAL 256 (415)
Q Consensus 179 ~~la~~~d~~V~iwd~~~~~~~~~~~~~~~~~V~~v~~sp~g~~la~g~~-dg~V~iwd~~~~~~-~~~l~~h~~~V~~l 256 (415)
-+|..+....|+..++.............-..+..|+|++.+..|..... .+.|..+++..... ...+.........|
T Consensus 10 ~~~~~~~~~~I~~i~~~~~~~~~~~~~~~~~~~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~~~~~v~~~~~~~P~Gl 89 (619)
T 3s94_A 10 PLLLYANRRDLRLVDATNGKENATIVVGGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGL 89 (619)
T ss_dssp CCEEEECSSBEEEECCC---------CBCCSCEEEEEEETTTTEEEEEETTTTEEEEEEC-----CEEEECSSCSCEEEE
T ss_pred ceEEEeccccEEEEeCCCCcceEEEEEcCCCceEEEEEEeCCCEEEEEECCCCeEEEEEccCCCceEEEEeCCCCCcCeE
Confidence 35666777889999887653212222233456899999997766665544 67788888865432 23333333456677
Q ss_pred Eee--CC-EEEEEeCCCcEEEEECCCCCccEEEeccccCCeEEEEEeCCCCEEEEEeC--CCcEEEEECCCCceeEEecc
Q 014934 257 AWS--SS-LLSSGSRDKSILQRDIRAQEDFVSKLSGHKSEVCGLKWSYDNRELASGGN--DNRLFVWNQHSTQPVLKYCE 331 (415)
Q Consensus 257 ~~~--~~-~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~spdg~~lasg~~--dg~I~iwd~~~~~~~~~~~~ 331 (415)
+++ ++ ++++-...+.|.+.++..... .......-....+|+++|.+..|..... .+.|...++...........
T Consensus 90 AvD~~~~~ly~~d~~~~~I~v~~~dG~~~-~~l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~~~~~l~~~ 168 (619)
T 3s94_A 90 ACDWLGEKLYWTDSETNRIEVSNLDGSLR-KVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINS 168 (619)
T ss_dssp EEETTTTEEEEEETTTTEEEEEETTSCSC-EEEECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECS
T ss_pred EEEecCCEEEEEeCCCCEEEEEECCCCCE-EEEEeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECCCCceEEEEeC
Confidence 766 34 555556678999999976542 2233234456788999997665555442 46788778764433333333
Q ss_pred CCCcEEEEEEcCCCCcEEEEEcCCCCCeEEEEECCCCcEEEEee-CCCCEEEEEECCCCCeEEEEEecCCCcEEEEECCC
Q 014934 332 HTAAVKAIAWSPHLHGLLASGGGTADRCIRFWNTTTNTHLSCMD-TGSQVCNLVWSKNVNELVSTHGYSQNQIIVWRYPT 410 (415)
Q Consensus 332 h~~~V~~l~~sp~~~~llasggg~~d~~I~iwd~~t~~~~~~~~-~~~~V~~l~~s~~~~~l~s~~g~~dg~I~vw~~~s 410 (415)
.-.....|++.+++..|+++-. ..+.|...|+........+. ......++++..+ .|..+ ....+.|...|..+
T Consensus 169 ~~~~P~Glald~~~~~LY~aD~--~~~~I~~~~~dG~~~~~~~~~~~~~P~gi~~~~~--~ly~t-d~~~~~V~~~d~~t 243 (619)
T 3s94_A 169 EIYWPNGLTLDYEEQKLYWADA--KLNFIHKSNLDGTNRQAVVKGSLPHPFALTLFED--ILYWT-DWSTHSILACNKYT 243 (619)
T ss_dssp SCSSEEEEEEETTTTEEEEEET--TTCCEEEESSSCCEEC---------CCCEEESSS--EEEEE-CTTTCSEEEEESSS
T ss_pred CCCCCcEEEEEccCCEEEEEeC--CCCeEEEecCCCCccEEEEeCCCCCceEEEEeCC--EEEEe-cCCCCEEEEEECCC
Confidence 4556899999998877888875 67889999987543322222 1222345677655 45544 45667888888766
Q ss_pred Cc
Q 014934 411 MS 412 (415)
Q Consensus 411 ~~ 412 (415)
++
T Consensus 244 g~ 245 (619)
T 3s94_A 244 GE 245 (619)
T ss_dssp CC
T ss_pred Cc
Confidence 54
No 289
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=98.01 E-value=0.0088 Score=55.63 Aligned_cols=230 Identities=10% Similarity=0.051 Sum_probs=149.1
Q ss_pred cCCCcEEEEEc----CCeEEEEECCCCCeEEeEecCCCCCeEEEEEcCCCCeEEEEECCCcEEEEECCCCeeeEEecCCC
Q 014934 175 WSSHNVLAVGL----GNCVYLWNACSSKVTKLCDLGIDDSVCSVGWANRNTHLAVGTSHGKVQIWDASRCKRVRTMEGHR 250 (415)
Q Consensus 175 ws~~~~la~~~----d~~V~iwd~~~~~~~~~~~~~~~~~V~~v~~sp~g~~la~g~~dg~V~iwd~~~~~~~~~l~~h~ 250 (415)
+.+++++++-. +..|.|.|+..+..........+ +.-.+|..+.||.-. ...++|+|+++...+..+.- .
T Consensus 33 mESDkyicVrE~~~~~~~VvIiDl~n~~~~~Rrpi~Ad----sAIMnP~~~ViALra-g~~LQiFnletK~klks~~~-~ 106 (365)
T 2xzh_A 33 MESDKFICIREKVGEQAQVVIIDMNDPSNPIRRPISAD----SAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTM-T 106 (365)
T ss_dssp EEETTEEEEEEEETTEEEEEEEETTSTTSCEEEECCCS----EEEECSSSSEEEEEE-TTEEEEEETTTTEEEEEEEC-S
T ss_pred eecCceEEEEecCCCCCEEEEEECCCCCCccccccccc----eeeeCCCccEEEEec-CCeEEEechHHhhhhcceec-C
Confidence 33355666542 23788888888654433332222 334588888888765 67899999999988888774 4
Q ss_pred ccEEEEEee-CCEEEEEeCCCcEEEEECCCCCccEEEecccc----CCeEEEEEeCCCCEEEEEeC-------CCcEEEE
Q 014934 251 LRVGALAWS-SSLLSSGSRDKSILQRDIRAQEDFVSKLSGHK----SEVCGLKWSYDNRELASGGN-------DNRLFVW 318 (415)
Q Consensus 251 ~~V~~l~~~-~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~----~~V~~l~~spdg~~lasg~~-------dg~I~iw 318 (415)
..|.--.|- ++.|+-.+ +..|+.|++.....+.+.+..|. ..|..-..+++.++++..|- .|.+.+|
T Consensus 107 e~VvfWkWis~~~L~lVT-~taVyHWs~~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLY 185 (365)
T 2xzh_A 107 DDVTFWKWISLNTVALVT-DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLY 185 (365)
T ss_dssp SCEEEEEECSSSEEEEEE-SSEEEEEESSTTCCCEEEEECCGGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEE
T ss_pred CccEEEEecCCCeEEEEc-CCcEEEEcccCCCCCceeeecchhcccceEEEEEECCCCCEEEEEeEeccCCccceeEEEE
Confidence 577777786 66666664 45699999987666777776653 45777788899999876442 3678889
Q ss_pred ECCCCceeEEeccCCCcEEEEEEcCC--CCcEEEEEcC-CCCCeEEEEECCCC---c-----EEEEee-----CCCCEEE
Q 014934 319 NQHSTQPVLKYCEHTAAVKAIAWSPH--LHGLLASGGG-TADRCIRFWNTTTN---T-----HLSCMD-----TGSQVCN 382 (415)
Q Consensus 319 d~~~~~~~~~~~~h~~~V~~l~~sp~--~~~llasggg-~~d~~I~iwd~~t~---~-----~~~~~~-----~~~~V~~ 382 (415)
..+.+ .-+.+++|.+....+...-+ ...|++-+.. ...+.+++-++... . ....+. ....-.+
T Consensus 186 S~er~-~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhIiEi~~~~~~~~~f~kk~vdi~fppea~~DFPVa 264 (365)
T 2xzh_A 186 SVDRK-VSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVA 264 (365)
T ss_dssp ETTTT-EEEEECCSEEEEEEECCTTCSSCEEEEEEEEEETTEEEEEEEECSSCCTTCCCCCCEEEEECCCTTCTTCCEEE
T ss_pred eeccc-ccceeeeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCCCCCCCcccccceeeCCccccCCceEE
Confidence 88654 45677788766544433221 1224443321 02258888888432 1 111111 2344566
Q ss_pred EEECCCCCeEEEEEecCCCcEEEEECCCCccc
Q 014934 383 LVWSKNVNELVSTHGYSQNQIIVWRYPTMSKV 414 (415)
Q Consensus 383 l~~s~~~~~l~s~~g~~dg~I~vw~~~s~~~l 414 (415)
+..++....+.. -..-|-|++||+.++..+
T Consensus 265 mqvs~kygviyv--iTK~G~ihlyDleTgt~i 294 (365)
T 2xzh_A 265 MQISEKHDVVFL--ITKYGYIHLYDLETGTCI 294 (365)
T ss_dssp EEEETTTTEEEE--EETTSEEEEEETTTCCEE
T ss_pred EEecccCCEEEE--EeCCcEEEEEEcccCcEE
Confidence 888887776666 347899999999998765
No 290
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=97.99 E-value=0.00054 Score=70.95 Aligned_cols=219 Identities=9% Similarity=0.018 Sum_probs=124.1
Q ss_pred eecCC-CcEEEEEc--CCeEEEEECCCCCeEEeEecCCCCCeEEEEEcCCCCeEEEEE-CC-----CcEEEEECCCCeee
Q 014934 173 VDWSS-HNVLAVGL--GNCVYLWNACSSKVTKLCDLGIDDSVCSVGWANRNTHLAVGT-SH-----GKVQIWDASRCKRV 243 (415)
Q Consensus 173 l~ws~-~~~la~~~--d~~V~iwd~~~~~~~~~~~~~~~~~V~~v~~sp~g~~la~g~-~d-----g~V~iwd~~~~~~~ 243 (415)
+.+.. +.++++|. +..+++||..+++...+..+.....-.+++..++|+.+++|+ .+ ..+.+||..+.+-.
T Consensus 248 ~~~~~~g~lyv~GG~~~~~v~~yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~ 327 (656)
T 1k3i_A 248 ISMDGNGQIVVTGGNDAKKTSLYDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWT 327 (656)
T ss_dssp EEECTTSCEEEECSSSTTCEEEEEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEE
T ss_pred ccCCCCCCEEEeCCCCCCceEEecCcCCceeECCCCCccccccceEEecCCeEEEEeCcccCCcccccceEeCCCCCcce
Confidence 34434 67777774 358999999988776655433333334556667999999998 34 46999999876533
Q ss_pred EE-------ecCCCccEEEEEeeCCEEEEEeCCC---------cEEEEECCCCCccEEEecccc---------CCeEEEE
Q 014934 244 RT-------MEGHRLRVGALAWSSSLLSSGSRDK---------SILQRDIRAQEDFVSKLSGHK---------SEVCGLK 298 (415)
Q Consensus 244 ~~-------l~~h~~~V~~l~~~~~~l~sgs~dg---------~I~iwd~~~~~~~~~~~~~h~---------~~V~~l~ 298 (415)
.. +...... ..+..++..++.|+.+| .+..||...... ......+. ..-.++.
T Consensus 328 ~~~~~~~~p~~~~~~~-~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w-~~~~~~~~~~~~~~~~~~~~~av~ 405 (656)
T 1k3i_A 328 SLPNAKVNPMLTADKQ-GLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGD-VKSAGKRQSNRGVAPDAMCGNAVM 405 (656)
T ss_dssp EETTSCSGGGCCCCTT-GGGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCE-EEEEEECEETTEECCCCBTCEEEE
T ss_pred eCCCcccccccccccc-ceeecCCceEEEECCCCcEEEecCccceeeeecCCcce-eecCCccccccccCCCCCCCceEe
Confidence 22 0000000 00112244455555444 467888877652 22221111 1234444
Q ss_pred EeC-CCCEEEEEeCCC-----------cEEEEECCCCceeEEe--ccCCCcE-EEEEEcCCCCcEEEEEcCCC-------
Q 014934 299 WSY-DNRELASGGNDN-----------RLFVWNQHSTQPVLKY--CEHTAAV-KAIAWSPHLHGLLASGGGTA------- 356 (415)
Q Consensus 299 ~sp-dg~~lasg~~dg-----------~I~iwd~~~~~~~~~~--~~h~~~V-~~l~~sp~~~~llasggg~~------- 356 (415)
+.. ++++++.|+.++ .|.+||..+....... ..+.... .+.+..|+++ +++.||...
T Consensus 406 ~~~~~~~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~mp~~R~~~~~~~l~~g~-i~v~GG~~~~~~~~~~ 484 (656)
T 1k3i_A 406 YDAVKGKILTFGGSPDYQDSDATTNAHIITLGEPGTSPNTVFASNGLYFARTFHTSVVLPDGS-TFITGGQRRGIPFEDS 484 (656)
T ss_dssp EETTTTEEEEECCBSSSSSSBCCCCEEEEECCSTTSCCEEEECTTCCSSCCBSCEEEECTTSC-EEEECCBSBCCTTCCC
T ss_pred ccCCCCeEEEEeCCCCCCCCCcCCcceEEEcCCCCCCCeeEEccCCCCCCcccCCeEECCCCC-EEEECCcccCcCcCCC
Confidence 543 778888887542 6888898776544332 1222222 3445667876 777775210
Q ss_pred --CCeEEEEECCCCcEEEEee--C-CCCEEEEEECCCCCeEEE
Q 014934 357 --DRCIRFWNTTTNTHLSCMD--T-GSQVCNLVWSKNVNELVS 394 (415)
Q Consensus 357 --d~~I~iwd~~t~~~~~~~~--~-~~~V~~l~~s~~~~~l~s 394 (415)
-..+.+||..+++-...-. . ........+.++++.++.
T Consensus 485 ~~~~~v~~ydp~t~~W~~~~~~~~~R~~hs~a~ll~dg~v~v~ 527 (656)
T 1k3i_A 485 TPVFTPEIYVPEQDTFYKQNPNSIVRVYHSISLLLPDGRVFNG 527 (656)
T ss_dssp SBCCCCEEEEGGGTEEEECCCCSSCCCTTEEEEECTTSCEEEE
T ss_pred CcccceEEEcCCCCceeecCCCCCccccccHhhcCCCcEEEec
Confidence 1568999998765432111 1 112234566789998888
No 291
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=97.95 E-value=0.0029 Score=59.20 Aligned_cols=196 Identities=12% Similarity=0.114 Sum_probs=125.1
Q ss_pred CcceeEeecCC-CcEEEEE--cCCeEEEEECCCCCeEEeEecCC-----C--CCeEEEEE---cCCCCeEEEEEC-----
Q 014934 167 DFYLNLVDWSS-HNVLAVG--LGNCVYLWNACSSKVTKLCDLGI-----D--DSVCSVGW---ANRNTHLAVGTS----- 228 (415)
Q Consensus 167 ~~~i~~l~ws~-~~~la~~--~d~~V~iwd~~~~~~~~~~~~~~-----~--~~V~~v~~---sp~g~~la~g~~----- 228 (415)
..|..+++|++ ...+.++ ..+.|..|+...+....+ .+.. . ..+..|.| .|+|+++++...
T Consensus 12 ~~yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~-~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~ 90 (334)
T 2p9w_A 12 NLTPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNV-VIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFN 90 (334)
T ss_dssp TCCCSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEE-CCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTC
T ss_pred ccCCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEE-ecCCccccCCCcceeeEEEEeccCCCCcEEEEEccccccc
Confidence 35677999988 4444444 479999999987766555 3332 1 13689999 688777776442
Q ss_pred --------CCcEEEEECC---CCeeeEEec--CC-----------CccEEEEEee--CCEEEEEeCC-CcEEEEECCCCC
Q 014934 229 --------HGKVQIWDAS---RCKRVRTME--GH-----------RLRVGALAWS--SSLLSSGSRD-KSILQRDIRAQE 281 (415)
Q Consensus 229 --------dg~V~iwd~~---~~~~~~~l~--~h-----------~~~V~~l~~~--~~~l~sgs~d-g~I~iwd~~~~~ 281 (415)
+..|..||+. +++.+.... .. ......|+.. ++..++++.- +.|...+.....
T Consensus 91 ~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~pdG~~ 170 (334)
T 2p9w_A 91 FADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVSADGKT 170 (334)
T ss_dssp TTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEECTTSCC
T ss_pred ccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEEEeCCCCE
Confidence 5679999998 777665443 11 1247788877 6788888887 888777776542
Q ss_pred ccEEEec------cccCCeEEEEEeCCCCEEEEEeCCCcEEEEECCCCce-eEEec--cC---CCcEEEE-EEcCCCCcE
Q 014934 282 DFVSKLS------GHKSEVCGLKWSYDNRELASGGNDNRLFVWNQHSTQP-VLKYC--EH---TAAVKAI-AWSPHLHGL 348 (415)
Q Consensus 282 ~~~~~~~------~h~~~V~~l~~spdg~~lasg~~dg~I~iwd~~~~~~-~~~~~--~h---~~~V~~l-~~sp~~~~l 348 (415)
+..+. ......++|+++|+|+.|++....|.|..+|+..... ..... +. -.....| .--.+|+.+
T Consensus 171 --~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~pv~~~v~~~~~G~~~~~~~~dgilp~~~~G~vl 248 (334)
T 2p9w_A 171 --VSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSKPYAWPEPVKINGDFGTLSGTEKIVTVPVGNESV 248 (334)
T ss_dssp --EEEEEECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECSSSSCCCEECEESSCCCCCTTEEEEEEEEETTEEE
T ss_pred --EeeeeecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCCCCcceeecccccCCcccccCcccccccccCCEEE
Confidence 22211 1122367999999999999887799999999885432 01121 21 1223343 333456655
Q ss_pred EEEEcCCCCCeEEEEECCC
Q 014934 349 LASGGGTADRCIRFWNTTT 367 (415)
Q Consensus 349 lasggg~~d~~I~iwd~~t 367 (415)
|++.+ ..+.+.+.+...
T Consensus 249 lV~~~--~~~~~~l~S~Dg 265 (334)
T 2p9w_A 249 LVGAR--APYAISFRSWDN 265 (334)
T ss_dssp EEEEE--TTEEEEEECSST
T ss_pred EEEcC--CCCEEEEECCCC
Confidence 66665 466666666543
No 292
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=97.80 E-value=0.017 Score=57.19 Aligned_cols=235 Identities=8% Similarity=0.024 Sum_probs=139.1
Q ss_pred eeEeecCC---CcEEEEEc-CCeEEEEECCCCCeEEeEecCC--CCCeEEEEE-------cCCCCeEEEEECCC-c----
Q 014934 170 LNLVDWSS---HNVLAVGL-GNCVYLWNACSSKVTKLCDLGI--DDSVCSVGW-------ANRNTHLAVGTSHG-K---- 231 (415)
Q Consensus 170 i~~l~ws~---~~~la~~~-d~~V~iwd~~~~~~~~~~~~~~--~~~V~~v~~-------sp~g~~la~g~~dg-~---- 231 (415)
...|+++| ++++++.. .+.|++.|..++.+..+...+. ......|+| +++|++|.++...+ .
T Consensus 141 p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~~ 220 (496)
T 3kya_A 141 NGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDES 220 (496)
T ss_dssp EEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGGE
T ss_pred CCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCcccC
Confidence 55778886 34444443 3579999999988877765322 235899999 99999777776654 2
Q ss_pred --EEEEECCC-Ceee-----EEecCCCccEEEEEeeC---CEEEEEeCCCcEEEEECC-------CCCc------c----
Q 014934 232 --VQIWDASR-CKRV-----RTMEGHRLRVGALAWSS---SLLSSGSRDKSILQRDIR-------AQED------F---- 283 (415)
Q Consensus 232 --V~iwd~~~-~~~~-----~~l~~h~~~V~~l~~~~---~~l~sgs~dg~I~iwd~~-------~~~~------~---- 283 (415)
|.+++... +... ..+... .....++.++ .++++-..++.|..+|+. ++.. .
T Consensus 221 ~~V~~i~r~~~G~~~~~~~~~~v~~~-~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~ 299 (496)
T 3kya_A 221 PSVYIIKRNADGTFDDRSDIQLIAAY-KQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNT 299 (496)
T ss_dssp EEEEEEECCTTSCCSTTSCEEEEEEE-SCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTT
T ss_pred ceEEEEecCCCCceeecccceeeccC-CCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeecccccccccc
Confidence 66665433 1211 122111 1223455553 455666677889999987 4431 0
Q ss_pred EEE-e-ccccCCeEEEEEeCCCCEEEE-EeCCCcEEEEEC--CCCce--eEEeccC---C------------CcEE-EEE
Q 014934 284 VSK-L-SGHKSEVCGLKWSYDNRELAS-GGNDNRLFVWNQ--HSTQP--VLKYCEH---T------------AAVK-AIA 340 (415)
Q Consensus 284 ~~~-~-~~h~~~V~~l~~spdg~~las-g~~dg~I~iwd~--~~~~~--~~~~~~h---~------------~~V~-~l~ 340 (415)
... + .+.......|+|+|+|+.|.. -...+.|+.+|. ..+.. ...+.+. . .... .++
T Consensus 300 ~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~dg~~~~~~~~~~~aG~~g~~G~~DG~~~~a~f~~P~~gv~ 379 (496)
T 3kya_A 300 FKQLFTIADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYDEIKKEFITPYNFVGGYKQSGYRDDVGTEARMNNPCQGVF 379 (496)
T ss_dssp EEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEEBTTBCCCBCCBGGGCBCSSEEEEEE
T ss_pred cceeEecCCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecCCCcceecccEEecCCCCCCcccCCcccccccCCCeEEEE
Confidence 111 1 122344678999999996444 456678988664 33321 1222221 0 1234 445
Q ss_pred Ec-------CCCCcEEEEEcCCCCCeEEEEECCCCcEEEEeeCC------------------------CCEEEEEECCC-
Q 014934 341 WS-------PHLHGLLASGGGTADRCIRFWNTTTNTHLSCMDTG------------------------SQVCNLVWSKN- 388 (415)
Q Consensus 341 ~s-------p~~~~llasggg~~d~~I~iwd~~t~~~~~~~~~~------------------------~~V~~l~~s~~- 388 (415)
.. +.+. |+++-. ....|+.++ .+|........+ .....|+++++
T Consensus 380 vd~~~~~~~~~g~-lyVaD~--~N~rIr~i~-~~G~v~TiaG~g~~~~~~~~~~~G~~dG~~~~~a~f~~P~gIavd~~~ 455 (496)
T 3kya_A 380 VKNPDYTGEEEYD-FYFVDR--LNFCVRKVT-PEGIVSTYAGRGASTSLADGNQWGTDDGDLREVARFRDVSGLVYDDVK 455 (496)
T ss_dssp EECTTCCSSCCEE-EEEEEG--GGTEEEEEC-TTCBEEEEEESCTTHHHHHSCSCCCCCEETTTTCCCSSEEEEEEETTT
T ss_pred EccccccccCCCe-EEEEEC--CCCEEEEEe-CCCCEEEEecccccccccCccccccCCCCchhhhhcCCCcEEEEECCC
Confidence 54 3443 666655 578999998 566433222221 23678999997
Q ss_pred CCeEEEEEecCCCcEEEEECCCC
Q 014934 389 VNELVSTHGYSQNQIIVWRYPTM 411 (415)
Q Consensus 389 ~~~l~s~~g~~dg~I~vw~~~s~ 411 (415)
+..+++ -..++.|+.+++..-
T Consensus 456 g~lyVa--D~~N~rIrki~~~~~ 476 (496)
T 3kya_A 456 EMFYVH--DQVGHTIRTISMEQE 476 (496)
T ss_dssp TEEEEE--ETTTTEEEEEEECCC
T ss_pred CEEEEE--eCCCCEEEEEECCCC
Confidence 666665 566789999987653
No 293
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=97.74 E-value=0.011 Score=55.71 Aligned_cols=189 Identities=11% Similarity=0.172 Sum_probs=126.3
Q ss_pred cEEEEEcCCeEEEEECCCCCeEEeEecCCCCCeEEEEEcCC----CCe--EEEEEC----CCcEEEEECC--CCeeeEEe
Q 014934 179 NVLAVGLGNCVYLWNACSSKVTKLCDLGIDDSVCSVGWANR----NTH--LAVGTS----HGKVQIWDAS--RCKRVRTM 246 (415)
Q Consensus 179 ~~la~~~d~~V~iwd~~~~~~~~~~~~~~~~~V~~v~~sp~----g~~--la~g~~----dg~V~iwd~~--~~~~~~~l 246 (415)
.+|++...+.+++||+ +|+.+..+. .+.+..|..-|+ |+. +|.++. +++|.+|++. ++ .+..+
T Consensus 42 ~ii~t~k~~gL~Vydl-~G~~l~~~~---~g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~-~l~~i 116 (355)
T 3amr_A 42 KLITTNKKSGLVVYSL-DGKMLHSYN---TGKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNG-TLQSM 116 (355)
T ss_dssp EEEEEETTTEEEEEET-TSCEEEEEC---CSCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTC-CEEEC
T ss_pred EEEEEcCCCCEEEEcC-CCcEEEEcc---CCCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCC-ceeec
Confidence 3555556789999999 778777764 256777777663 322 333333 4689999773 33 35444
Q ss_pred cC------CC-ccEEEEEe--eC---C-EEEEEeCCCcEEEEECCC---C---CccEEEeccccCCeEEEEEeCCCCEEE
Q 014934 247 EG------HR-LRVGALAW--SS---S-LLSSGSRDKSILQRDIRA---Q---EDFVSKLSGHKSEVCGLKWSYDNRELA 307 (415)
Q Consensus 247 ~~------h~-~~V~~l~~--~~---~-~l~sgs~dg~I~iwd~~~---~---~~~~~~~~~h~~~V~~l~~spdg~~la 307 (415)
.. .. ..+..++. ++ . ++++...+|.+..|++.. + .+.++.+.- ...+.++...+....|.
T Consensus 117 ~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~l-gsq~EgcvvDd~~g~Ly 195 (355)
T 3amr_A 117 TDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKM-NSQTEGMAADDEYGRLY 195 (355)
T ss_dssp SCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEEC-SSCEEEEEEETTTTEEE
T ss_pred cccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecC-CCCcceEEEcCCCCeEE
Confidence 22 11 34555665 42 2 688888999999999843 1 123445443 45788999999999999
Q ss_pred EEeCCCcEEEEECC-----CCceeEEec-cC-CCcEEEEEE--cCCCC-cEEEEEcCCCCCeEEEEECC-CCcEEEEee
Q 014934 308 SGGNDNRLFVWNQH-----STQPVLKYC-EH-TAAVKAIAW--SPHLH-GLLASGGGTADRCIRFWNTT-TNTHLSCMD 375 (415)
Q Consensus 308 sg~~dg~I~iwd~~-----~~~~~~~~~-~h-~~~V~~l~~--sp~~~-~llasggg~~d~~I~iwd~~-t~~~~~~~~ 375 (415)
.+-++.-|..+|.+ +++.+..+. ++ ...+..|++ .++++ +|++++- .+....+||.. +.+.+..+.
T Consensus 196 v~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQ--G~~s~~Vydr~~~~~~vg~f~ 272 (355)
T 3amr_A 196 IAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQ--GNSSYAIYDRQGKNKYVADFR 272 (355)
T ss_dssp EEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEG--GGTEEEEEESSTTCCEEEEEE
T ss_pred EecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcC--CCCEEEEEECCCCCcEEEEEE
Confidence 99999778777855 344555542 22 347888888 55555 6888885 47899999997 677777764
No 294
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=97.73 E-value=0.0069 Score=59.31 Aligned_cols=192 Identities=6% Similarity=-0.062 Sum_probs=118.1
Q ss_pred CeEEEEEcCC--CCeEEEEECCCcEEEEECCCCeeeEEecCCCccEEEEEee--CCEEEEEeCCC-----cEEEEECCCC
Q 014934 210 SVCSVGWANR--NTHLAVGTSHGKVQIWDASRCKRVRTMEGHRLRVGALAWS--SSLLSSGSRDK-----SILQRDIRAQ 280 (415)
Q Consensus 210 ~V~~v~~sp~--g~~la~g~~dg~V~iwd~~~~~~~~~l~~h~~~V~~l~~~--~~~l~sgs~dg-----~I~iwd~~~~ 280 (415)
....|+|+|+ +..|.++...+.|+.+|..+++..... ........|+++ ++ |+.+...+ .+...+....
T Consensus 140 ~P~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g~v~~~~-~~~~~P~giavd~dG~-lyVad~~~~~~~~gv~~~~~~~~ 217 (433)
T 4hw6_A 140 NIWRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQYVDIKT-TNIGQCADVNFTLNGD-MVVVDDQSSDTNTGIYLFTRASG 217 (433)
T ss_dssp CCCEEEECTTTTTCEEEEECBTSCEEEEETTTTEEEEEC-CCCSCEEEEEECTTCC-EEEEECCSCTTSEEEEEECGGGT
T ss_pred CCceEEEccccCCCEEEEEeCCCCEEEEECCCCEEEEee-cCCCCccEEEECCCCC-EEEEcCCCCcccceEEEEECCCC
Confidence 4678999985 445555555488999999877655443 345568888888 45 44444321 1333333222
Q ss_pred CccEEEeccccCCeEEEEEeC-CCCEEEEEeCCCcEEEEECCCCceeEEe-c-cCCCcEEEEEEcCCCCcEEEEEcCCCC
Q 014934 281 EDFVSKLSGHKSEVCGLKWSY-DNRELASGGNDNRLFVWNQHSTQPVLKY-C-EHTAAVKAIAWSPHLHGLLASGGGTAD 357 (415)
Q Consensus 281 ~~~~~~~~~h~~~V~~l~~sp-dg~~lasg~~dg~I~iwd~~~~~~~~~~-~-~h~~~V~~l~~sp~~~~llasggg~~d 357 (415)
......+. ......+++++| +|.++++-..++.|+.+|..++.....+ . +....-..++|+|+++.|+++-. ..
T Consensus 218 ~~~~~~~~-~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~--~~ 294 (433)
T 4hw6_A 218 FTERLSLC-NARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYN--GK 294 (433)
T ss_dssp TCCEEEEE-ECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEET--TT
T ss_pred eecccccc-ccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeC--CC
Confidence 11011111 234466788999 7776666667789999999877652222 1 12223357999999987888775 67
Q ss_pred CeEEEEECC--CCcEE--EEe-eC---------------CCCEEEEEE---------CCCCCeEEEEEecCCCcEEEEEC
Q 014934 358 RCIRFWNTT--TNTHL--SCM-DT---------------GSQVCNLVW---------SKNVNELVSTHGYSQNQIIVWRY 408 (415)
Q Consensus 358 ~~I~iwd~~--t~~~~--~~~-~~---------------~~~V~~l~~---------s~~~~~l~s~~g~~dg~I~vw~~ 408 (415)
+.|+.++.. ++... ..+ .. -.....+++ ..+|+.+++ -...+.|+.++.
T Consensus 295 ~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyva--D~~n~~I~~~~~ 372 (433)
T 4hw6_A 295 HCIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFC--DRDSHTVRVLTP 372 (433)
T ss_dssp TEEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEE--ETTTTEEEEECT
T ss_pred CEEEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcEEEE--ECCCCEEEEECC
Confidence 899998865 33211 111 11 123667999 777776666 556778888873
No 295
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=97.72 E-value=0.0018 Score=63.37 Aligned_cols=151 Identities=11% Similarity=0.065 Sum_probs=98.1
Q ss_pred cEEEEEeeC---CEEEEEeCCCcEEEEECCCCCccEEEeccccCCeEEEEEeCCCCEEEEEeC-CC----cEEEEECCCC
Q 014934 252 RVGALAWSS---SLLSSGSRDKSILQRDIRAQEDFVSKLSGHKSEVCGLKWSYDNRELASGGN-DN----RLFVWNQHST 323 (415)
Q Consensus 252 ~V~~l~~~~---~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~spdg~~lasg~~-dg----~I~iwd~~~~ 323 (415)
....|++++ ..|+.+...+.|..+|+.... +..+.......++|+|+++|++|+++.. ++ .+.+++. .+
T Consensus 138 ~P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~--v~~~~~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~-~g 214 (430)
T 3tc9_A 138 GAVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEY--VSTVYSGLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTR-ES 214 (430)
T ss_dssp CCCEEEEETTEEEEEEEEEBTEEEEEEETTTTE--EEEEECCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEG-GG
T ss_pred CCCEEEECCCCCCeEEEEeCCCcEEEEECCCCE--EEEEecCCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeC-CC
Confidence 345677774 456666555889999987654 3344444567899999999996655554 22 3444443 33
Q ss_pred cee--EEeccCCCcEEEEEEcCCCCcEEEEEcCCCCCeEEEEECCCCcEEEEee--CCCCEEEEEECCCCCeEEEEEecC
Q 014934 324 QPV--LKYCEHTAAVKAIAWSPHLHGLLASGGGTADRCIRFWNTTTNTHLSCMD--TGSQVCNLVWSKNVNELVSTHGYS 399 (415)
Q Consensus 324 ~~~--~~~~~h~~~V~~l~~sp~~~~llasggg~~d~~I~iwd~~t~~~~~~~~--~~~~V~~l~~s~~~~~l~s~~g~~ 399 (415)
... ..+.. ......++++|++..|+++-. .++.|..++..++....... .......++|+|+|++|..+ ...
T Consensus 215 ~~~~~~~l~~-~~~p~giavdp~~g~lyv~d~--~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~-d~~ 290 (430)
T 3tc9_A 215 GFKVITELTK-GQNCNGAETHPINGELYFNSW--NAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIV-VVN 290 (430)
T ss_dssp TSCSEEEEEE-CSSCCCEEECTTTCCEEEEET--TTTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEE-ETT
T ss_pred ceeeeeeecc-CCCceEEEEeCCCCEEEEEEC--CCCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEE-ECC
Confidence 221 22221 234567889995445887765 57899999998776422222 33457889999999966654 456
Q ss_pred CCcEEEEECC
Q 014934 400 QNQIIVWRYP 409 (415)
Q Consensus 400 dg~I~vw~~~ 409 (415)
.+.|..+++.
T Consensus 291 ~~~I~~~~~d 300 (430)
T 3tc9_A 291 QHYILRSDYD 300 (430)
T ss_dssp TTEEEEEEEE
T ss_pred CCEEEEEeCC
Confidence 7899998875
No 296
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=97.70 E-value=0.017 Score=60.95 Aligned_cols=185 Identities=12% Similarity=0.019 Sum_probs=120.9
Q ss_pred eEEEEECCCcEEEEECCCCeeeEEecCCCccEEEEEeeC---CEEEEEeCCCcEEEEECCCCC---ccEEEeccccCCeE
Q 014934 222 HLAVGTSHGKVQIWDASRCKRVRTMEGHRLRVGALAWSS---SLLSSGSRDKSILQRDIRAQE---DFVSKLSGHKSEVC 295 (415)
Q Consensus 222 ~la~g~~dg~V~iwd~~~~~~~~~l~~h~~~V~~l~~~~---~~l~sgs~dg~I~iwd~~~~~---~~~~~~~~h~~~V~ 295 (415)
+|+. +....|+..++........+. ....+.+|+|+. .++++-...+.|+.+++.... .....+........
T Consensus 397 ~Ll~-an~~~Ir~i~l~~~~~~~l~~-~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~ 474 (791)
T 3m0c_C 397 YLFF-TNRHEVRKMTLDRSEYTSLIP-NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPD 474 (791)
T ss_dssp EEEE-ECBSSEEEECTTSCCCEEEEC-SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCC
T ss_pred cccc-ccccceeEeeccCCcceeeec-CCCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcc
Confidence 3443 344568888887655444444 345677888873 355555667789999987531 12333333445678
Q ss_pred EEEEeCCCCEE-EEEeCCCcEEEEECCCCceeEEeccCCCcEEEEEEcCCCCcEEEEEcCCCCCeEEEEECCCCcEEEEe
Q 014934 296 GLKWSYDNREL-ASGGNDNRLFVWNQHSTQPVLKYCEHTAAVKAIAWSPHLHGLLASGGGTADRCIRFWNTTTNTHLSCM 374 (415)
Q Consensus 296 ~l~~spdg~~l-asg~~dg~I~iwd~~~~~~~~~~~~h~~~V~~l~~sp~~~~llasggg~~d~~I~iwd~~t~~~~~~~ 374 (415)
+|++.+.++.| ++-...+.|.+.++........+........+|++.|.+..|+.+-.| ..+.|...++........+
T Consensus 475 GLAvD~~~~~LY~tD~~~~~I~v~~ldG~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g-~~~~I~~~~~dG~~~~~lv 553 (791)
T 3m0c_C 475 GLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWG-TPAKIKKGGLNGVDIYSLV 553 (791)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECS-SSCEEEEEETTSCCEEEEE
T ss_pred eeeeeecCCcEEEEecCCCeEEEEeCCCCeEEEEEeCCCCCcceEEEecCCCCEEEecCC-CCCeEEEEecCCCceEEEE
Confidence 89999877554 555567899999997654433343445568999999987778887642 3478999998755544444
Q ss_pred eCC-CCEEEEEECCCCCeEEEEEecCCCcEEEEECCC
Q 014934 375 DTG-SQVCNLVWSKNVNELVSTHGYSQNQIIVWRYPT 410 (415)
Q Consensus 375 ~~~-~~V~~l~~s~~~~~l~s~~g~~dg~I~vw~~~s 410 (415)
..+ ....+|++++.+..|..+ -...+.|...++..
T Consensus 554 ~~~l~~P~GLavD~~~~~LYwa-D~~~~~I~~~d~dG 589 (791)
T 3m0c_C 554 TENIQWPNGITLDLLSGRLYWV-DSKLHSISSIDVNG 589 (791)
T ss_dssp CSSCSCEEEEEEETTTTEEEEE-ETTTTEEEEEETTS
T ss_pred eCCCCCceEEEEecCCCeEEEE-eCCCCcEEEEecCC
Confidence 333 578899999887777775 34567888888754
No 297
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=97.70 E-value=0.026 Score=52.54 Aligned_cols=194 Identities=12% Similarity=0.130 Sum_probs=128.1
Q ss_pred ceeEeecCCCcEEEEEcCCeEEEEECCC-CCeEEeEecCC---CCCeEEEEEcCCCCeEEEEEC-------CCcEEEEEC
Q 014934 169 YLNLVDWSSHNVLAVGLGNCVYLWNACS-SKVTKLCDLGI---DDSVCSVGWANRNTHLAVGTS-------HGKVQIWDA 237 (415)
Q Consensus 169 ~i~~l~ws~~~~la~~~d~~V~iwd~~~-~~~~~~~~~~~---~~~V~~v~~sp~g~~la~g~~-------dg~V~iwd~ 237 (415)
.|.--.|-..+.|+.-.+..||-|++.. ....+.++-.. ...|..-..+++.++++..+- .|.+++|..
T Consensus 108 ~VvfWkWis~~~L~lVT~taVyHWs~~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~ 187 (365)
T 2xzh_A 108 DVTFWKWISLNTVALVTDNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSV 187 (365)
T ss_dssp CEEEEEECSSSEEEEEESSEEEEEESSTTCCCEEEEECCGGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEET
T ss_pred ccEEEEecCCCeEEEEcCCcEEEEcccCCCCCceeeecchhcccceEEEEEECCCCCEEEEEeEeccCCccceeEEEEee
Confidence 3666788888889998999999999975 45666665211 356777788888887766532 378999998
Q ss_pred CCCeeeEEecCCCccEEEEEeeC-----CEEEEEeCC---CcEEEEECCCC---C-----ccEEEecc---ccCCeEEEE
Q 014934 238 SRCKRVRTMEGHRLRVGALAWSS-----SLLSSGSRD---KSILQRDIRAQ---E-----DFVSKLSG---HKSEVCGLK 298 (415)
Q Consensus 238 ~~~~~~~~l~~h~~~V~~l~~~~-----~~l~sgs~d---g~I~iwd~~~~---~-----~~~~~~~~---h~~~V~~l~ 298 (415)
+.. .-+.+++|.+....+...+ .+|+-+.+. +.+++.++... . +.+..+.. -..---++.
T Consensus 188 er~-~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhIiEi~~~~~~~~~f~kk~vdi~fppea~~DFPVamq 266 (365)
T 2xzh_A 188 DRK-VSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQ 266 (365)
T ss_dssp TTT-EEEEECCSEEEEEEECCTTCSSCEEEEEEEEEETTEEEEEEEECSSCCTTCCCCCCEEEEECCCTTCTTCCEEEEE
T ss_pred ccc-ccceeeeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCCCCCCCcccccceeeCCccccCCceEEEE
Confidence 764 4567888887776666653 233433332 57889988543 1 11111111 122345688
Q ss_pred EeCCCCEEEEEeCCCcEEEEECCCCceeEEeccCCCcEEEEEEcCCCCcEEEEEcCCCCCeEEEEECC
Q 014934 299 WSYDNRELASGGNDNRLFVWNQHSTQPVLKYCEHTAAVKAIAWSPHLHGLLASGGGTADRCIRFWNTT 366 (415)
Q Consensus 299 ~spdg~~lasg~~dg~I~iwd~~~~~~~~~~~~h~~~V~~l~~sp~~~~llasggg~~d~~I~iwd~~ 366 (415)
.++.-..+..-+.-|.|++||+.++.++..-+-....|..-+-......+++.. ..|.|.--.+.
T Consensus 267 vs~kygviyviTK~G~ihlyDleTgt~i~~nrIS~d~iF~ta~~~~~~Gi~~Vn---r~GqVl~v~v~ 331 (365)
T 2xzh_A 267 ISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISGETIFVTAPHEATAGIIGVN---RKGQVLSVCVE 331 (365)
T ss_dssp EETTTTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEEGGGTEEEEEE---TTCEEEEEEEC
T ss_pred ecccCCEEEEEeCCcEEEEEEcccCcEEEEeccCCCceEEecccCCCCcEEEEc---CCCEEEEEEEC
Confidence 888888888899999999999999999887655555555545444444455544 35555444443
No 298
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=97.64 E-value=0.052 Score=52.49 Aligned_cols=229 Identities=10% Similarity=0.060 Sum_probs=149.4
Q ss_pred CCCcEEEEEc----CCeEEEEECCCCCeEEeEecCCCCCeEEEEEcCCCCeEEEEECCCcEEEEECCCCeeeEEecCCCc
Q 014934 176 SSHNVLAVGL----GNCVYLWNACSSKVTKLCDLGIDDSVCSVGWANRNTHLAVGTSHGKVQIWDASRCKRVRTMEGHRL 251 (415)
Q Consensus 176 s~~~~la~~~----d~~V~iwd~~~~~~~~~~~~~~~~~V~~v~~sp~g~~la~g~~dg~V~iwd~~~~~~~~~l~~h~~ 251 (415)
.+++++.+-. +..|.|.|+..+.......... -+.-.+|..+.||.=. ..+++|+|+++...+..+.- ..
T Consensus 33 ESDkyicVrE~~~~~~~vvIiDl~~~~~~~rrpi~A----dsAIMnP~~~iiALra-g~~lQiFnle~K~klks~~~-~e 106 (494)
T 1bpo_A 33 ESDKFICIREKVGEQAQVVIIDMNDPSNPIRRPISA----DSAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTM-TD 106 (494)
T ss_dssp EETTEEEEEECCTTCCEEEEEETTSTTSCEEEECCC----SEEEECSSSSCEEEEE-TTEEEEEETTTTEEEEEEEC-SS
T ss_pred ecCceEEEEecCCCCCeEEEEECCCCCcceeccccc----ceeeeCCCCcEEEEec-CCeEEEEchHHhhhhcceec-CC
Confidence 3355666542 2478888887765443332222 2345678888888765 67899999999888887774 44
Q ss_pred cEEEEEee-CCEEEEEeCCCcEEEEECCCCCccEEEecccc----CCeEEEEEeCCCCEEEEEeC-------CCcEEEEE
Q 014934 252 RVGALAWS-SSLLSSGSRDKSILQRDIRAQEDFVSKLSGHK----SEVCGLKWSYDNRELASGGN-------DNRLFVWN 319 (415)
Q Consensus 252 ~V~~l~~~-~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~----~~V~~l~~spdg~~lasg~~-------dg~I~iwd 319 (415)
.|.--.|- ++.|+-.+ +..|+.|++.....+++.+..|. ..|..-..+++.++++..|- .|.+.+|.
T Consensus 107 ~VvfWkWis~~~l~lVT-~taVyHWsi~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS 185 (494)
T 1bpo_A 107 DVTFWKWISLNTVALVT-DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYS 185 (494)
T ss_dssp CCCEEEEEETTEEEEEC-SSEEEEEESSSSCCCEEEEECCGGGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEE
T ss_pred CceEEEecCCCeEEEEc-CCeeEEecccCCCCchhheecchhcccceEEEEEECCCCCeEEEEeecccCCcccceEEEee
Confidence 56667775 67776664 56799999987666777776653 45777788999999876442 36788998
Q ss_pred CCCCceeEEeccCCCcEEEEEEcCCC--CcEEEEEcC-CCCCeEEEEECCCC---c---EEEEee-------CCCCEEEE
Q 014934 320 QHSTQPVLKYCEHTAAVKAIAWSPHL--HGLLASGGG-TADRCIRFWNTTTN---T---HLSCMD-------TGSQVCNL 383 (415)
Q Consensus 320 ~~~~~~~~~~~~h~~~V~~l~~sp~~--~~llasggg-~~d~~I~iwd~~t~---~---~~~~~~-------~~~~V~~l 383 (415)
.+.+ .-+.+++|.+....+...-+. ..+++-+.. ...+.++|.++... . ....++ ....-.++
T Consensus 186 ~er~-~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhi~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFPvam 264 (494)
T 1bpo_A 186 VDRK-VSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAM 264 (494)
T ss_dssp STTC-CEEEECCSEEEEEEEECTTCSSEEEEEEEEECSTTCCEEEEEECSCCCTTCCCCCCEEEECCCCTTSTTCCEEEE
T ss_pred cccc-ccchheeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCccCCCCccceeeeeeCCcccccCceeEE
Confidence 8654 456778887766555443221 224444431 12378888888532 1 111121 13445678
Q ss_pred EECCCCCeEEEEEecCCCcEEEEECCCCccc
Q 014934 384 VWSKNVNELVSTHGYSQNQIIVWRYPTMSKV 414 (415)
Q Consensus 384 ~~s~~~~~l~s~~g~~dg~I~vw~~~s~~~l 414 (415)
..++....+.. -..-|-|++||+.++..+
T Consensus 265 qvs~kygviyv--iTK~G~i~lyDleTgt~i 293 (494)
T 1bpo_A 265 QISEKHDVVFL--ITKYGYIHLYDLETGTCI 293 (494)
T ss_dssp EEETTTTEEEE--EETTSEEEEEETTTCCEE
T ss_pred EecccCCEEEE--EecCceEEEEecccceee
Confidence 88887777666 357899999999998765
No 299
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=97.61 E-value=0.041 Score=53.16 Aligned_cols=192 Identities=13% Similarity=0.140 Sum_probs=129.3
Q ss_pred eeEeecCCCcEEEEEcCCeEEEEECCC-CCeEEeEecCC----CCCeEEEEEcCCCCeEEEEEC-------CCcEEEEEC
Q 014934 170 LNLVDWSSHNVLAVGLGNCVYLWNACS-SKVTKLCDLGI----DDSVCSVGWANRNTHLAVGTS-------HGKVQIWDA 237 (415)
Q Consensus 170 i~~l~ws~~~~la~~~d~~V~iwd~~~-~~~~~~~~~~~----~~~V~~v~~sp~g~~la~g~~-------dg~V~iwd~ 237 (415)
|.--.|=..+.|+.-.+..||-|++.. ....+.++ .| ...|..-..+++.++++..+- .|.+++|..
T Consensus 108 VvfWkWis~~~l~lVT~taVyHWsi~~~s~P~kvFd-R~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~ 186 (494)
T 1bpo_A 108 VTFWKWISLNTVALVTDNAVYHWSMEGESQPVKMFD-RHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSV 186 (494)
T ss_dssp CCEEEEEETTEEEEECSSEEEEEESSSSCCCEEEEE-CCGGGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEES
T ss_pred ceEEEecCCCeEEEEcCCeeEEecccCCCCchhhee-cchhcccceEEEEEECCCCCeEEEEeecccCCcccceEEEeec
Confidence 445578778889999999999999975 35666665 22 356777788889997765432 478999998
Q ss_pred CCCeeeEEecCCCccEEEEEeeC-----CEEEEEeCC---CcEEEEECCCC---C-----ccEEEecc---ccCCeEEEE
Q 014934 238 SRCKRVRTMEGHRLRVGALAWSS-----SLLSSGSRD---KSILQRDIRAQ---E-----DFVSKLSG---HKSEVCGLK 298 (415)
Q Consensus 238 ~~~~~~~~l~~h~~~V~~l~~~~-----~~l~sgs~d---g~I~iwd~~~~---~-----~~~~~~~~---h~~~V~~l~ 298 (415)
+.. .-+.+++|.+....+...+ .+++.+.+. +.+++.++... . +.+..+.. -..---++.
T Consensus 187 er~-~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhi~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFPvamq 265 (494)
T 1bpo_A 187 DRK-VSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQ 265 (494)
T ss_dssp TTC-CEEEECCSEEEEEEEECTTCSSEEEEEEEEECSTTCCEEEEEECSCCCTTCCCCCCEEEECCCCTTSTTCCEEEEE
T ss_pred ccc-ccchheeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCccCCCCccceeeeeeCCcccccCceeEEE
Confidence 764 4567889988777777663 245555543 78999998654 1 11111111 122345688
Q ss_pred EeCCCCEEEEEeCCCcEEEEECCCCceeEEeccCCCcEEEEEEcCCCCcEEEEEcCCCCCeEEEEECC
Q 014934 299 WSYDNRELASGGNDNRLFVWNQHSTQPVLKYCEHTAAVKAIAWSPHLHGLLASGGGTADRCIRFWNTT 366 (415)
Q Consensus 299 ~spdg~~lasg~~dg~I~iwd~~~~~~~~~~~~h~~~V~~l~~sp~~~~llasggg~~d~~I~iwd~~ 366 (415)
.++.-..+..-..-|.|++||+.++.++..-+-....|..-+-......+++.. ..|.|.--.+.
T Consensus 266 vs~kygviyviTK~G~i~lyDleTgt~i~~nrIs~~~iF~t~~~~~~~Gi~~Vn---r~GqVl~v~v~ 330 (494)
T 1bpo_A 266 ISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISGETIFVTAPHEATAGIIGVN---RKGQVLSVCVE 330 (494)
T ss_dssp EETTTTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEETTTTEEEEEE---TTCEEEEEEEC
T ss_pred ecccCCEEEEEecCceEEEEecccceeeeeecccCCceEEecccCCCCcEEEEc---cCceEEEEEEc
Confidence 888888899999999999999999999887655555555555544444455544 35554444443
No 300
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=97.60 E-value=0.0035 Score=57.70 Aligned_cols=214 Identities=14% Similarity=0.084 Sum_probs=112.0
Q ss_pred CeEEEEECCCCCeEEeEecCCC-CCeEEEEEcCCCCeEEEEECC-----CcEEEEECCCCe-----eeEEecCCCccEEE
Q 014934 187 NCVYLWNACSSKVTKLCDLGID-DSVCSVGWANRNTHLAVGTSH-----GKVQIWDASRCK-----RVRTMEGHRLRVGA 255 (415)
Q Consensus 187 ~~V~iwd~~~~~~~~~~~~~~~-~~V~~v~~sp~g~~la~g~~d-----g~V~iwd~~~~~-----~~~~l~~h~~~V~~ 255 (415)
..+++||..+.+...+..+... .....+. .++..++.|+.+ ..+.+||..+.+ .+..+........+
T Consensus 31 ~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~r~~~~~ 108 (301)
T 2vpj_A 31 DVVEKYDPKTQEWSFLPSITRKRRYVASVS--LHDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVRRGLAGA 108 (301)
T ss_dssp CCEEEEETTTTEEEECCCCSSCCBSCEEEE--ETTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSSCCBSCEE
T ss_pred eEEEEEcCCCCeEEeCCCCChhhccccEEE--ECCEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCCCccceeE
Confidence 4699999998876655433221 1222222 357777777754 368999987654 33223222222333
Q ss_pred EEeeCCEEEEEeCCC-----cEEEEECCCCCcc-EEEeccccCCeEEEEEeCCCCEEEEEeCC-----CcEEEEECCCCc
Q 014934 256 LAWSSSLLSSGSRDK-----SILQRDIRAQEDF-VSKLSGHKSEVCGLKWSYDNRELASGGND-----NRLFVWNQHSTQ 324 (415)
Q Consensus 256 l~~~~~~l~sgs~dg-----~I~iwd~~~~~~~-~~~~~~h~~~V~~l~~spdg~~lasg~~d-----g~I~iwd~~~~~ 324 (415)
+..++.+++.|+.++ .+.+||+.+..-. +..+......-..+. -++++++.|+.+ +.+.+||+.+.+
T Consensus 109 ~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~d~~~~~ 186 (301)
T 2vpj_A 109 TTLGDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAREGAGLVV--ASGVIYCLGGYDGLNILNSVEKYDPHTGH 186 (301)
T ss_dssp EEETTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCBSCEEEE--ETTEEEEECCBCSSCBCCCEEEEETTTTE
T ss_pred EEECCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCCcccceEEE--ECCEEEEECCCCCCcccceEEEEeCCCCc
Confidence 444566777776543 5888998776511 111111111112222 267777887754 468999988764
Q ss_pred eeEE--eccCCCcEEEEEEcCCCCcEEEEEcCCC---CCeEEEEECCCCcEEEEeeC--C-CCEEEEEECCCCCeEEEEE
Q 014934 325 PVLK--YCEHTAAVKAIAWSPHLHGLLASGGGTA---DRCIRFWNTTTNTHLSCMDT--G-SQVCNLVWSKNVNELVSTH 396 (415)
Q Consensus 325 ~~~~--~~~h~~~V~~l~~sp~~~~llasggg~~---d~~I~iwd~~t~~~~~~~~~--~-~~V~~l~~s~~~~~l~s~~ 396 (415)
-... +........++.+ +..+++.||... -..+.+||+.+.+-...-.. . .....+.+ +++.++.
T Consensus 187 W~~~~~~p~~r~~~~~~~~---~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~-- 259 (301)
T 2vpj_A 187 WTNVTPMATKRSGAGVALL---NDHIYVVGGFDGTAHLSSVEAYNIRTDSWTTVTSMTTPRCYVGATVL--RGRLYAI-- 259 (301)
T ss_dssp EEEECCCSSCCBSCEEEEE---TTEEEEECCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEE--
T ss_pred EEeCCCCCcccccceEEEE---CCEEEEEeCCCCCcccceEEEEeCCCCcEEECCCCCCcccceeEEEE--CCEEEEE--
Confidence 3322 1111111122222 335777775211 25689999988764332211 1 11122222 4555554
Q ss_pred ecCC-----CcEEEEECCCC
Q 014934 397 GYSQ-----NQIIVWRYPTM 411 (415)
Q Consensus 397 g~~d-----g~I~vw~~~s~ 411 (415)
|+.+ +.|.+||..+.
T Consensus 260 GG~~~~~~~~~v~~yd~~~~ 279 (301)
T 2vpj_A 260 AGYDGNSLLSSIECYDPIID 279 (301)
T ss_dssp CCBCSSSBEEEEEEEETTTT
T ss_pred cCcCCCcccccEEEEcCCCC
Confidence 4443 46778887653
No 301
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=97.58 E-value=0.091 Score=53.80 Aligned_cols=228 Identities=7% Similarity=-0.056 Sum_probs=135.7
Q ss_pred CcEEEEEcCCeEEEEECCCCCeEEeE-ecCCCCCeEEEEEcCCCCeEEEEE-CCCcEEEEECCCCeeeEEecCCCccEEE
Q 014934 178 HNVLAVGLGNCVYLWNACSSKVTKLC-DLGIDDSVCSVGWANRNTHLAVGT-SHGKVQIWDASRCKRVRTMEGHRLRVGA 255 (415)
Q Consensus 178 ~~~la~~~d~~V~iwd~~~~~~~~~~-~~~~~~~V~~v~~sp~g~~la~g~-~dg~V~iwd~~~~~~~~~l~~h~~~V~~ 255 (415)
..+|.++..+.|+..++......... .+..-..+.+|+|.+.+..|..+. ..+.|..+++........+.........
T Consensus 317 ~~~Ll~~~~~~i~~i~l~~~~~~~~~~~~~~l~~~~~ld~d~~~~~ly~sD~~~~~I~r~~~~g~~~~~v~~~~~~~p~G 396 (619)
T 3s94_A 317 TELLLLARRTDLRRISLDTPDFTDIVLQLEDIRHAIAIDYDPVEGYIYWTDDEVRAIRRSFIDGSGSQFVVTAQIAHPDG 396 (619)
T ss_dssp SEEEEEEESSCEEEEESSSTTCCCEECCCSCCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCE
T ss_pred ceEEEEEcccceEEEecCCCccceeEEeccccCccEEEEEEcCCCeEEEEeCCCCeEEEEEcCCCccEEEEECCCCCcCc
Confidence 55777887788888888766532222 222235688999998665555544 5778999988754333333332234445
Q ss_pred EEee--C-CEEEEEeCCCcEEEEECCCCCccEEEeccccCCeEEEEEeCCCCEEEEEe--CCCcEEEEECCCCceeEEec
Q 014934 256 LAWS--S-SLLSSGSRDKSILQRDIRAQEDFVSKLSGHKSEVCGLKWSYDNRELASGG--NDNRLFVWNQHSTQPVLKYC 330 (415)
Q Consensus 256 l~~~--~-~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~spdg~~lasg~--~dg~I~iwd~~~~~~~~~~~ 330 (415)
|+++ + ++.++-+..+.|.+.++..... .......-....+|++.|....|.... ..+.|...++..........
T Consensus 397 lAvD~~~~~lY~tD~~~~~I~v~~~~G~~~-~~l~~~~l~~P~~iavdp~~G~ly~tD~g~~~~I~r~~~dG~~~~~l~~ 475 (619)
T 3s94_A 397 IAVDWVARNLYWTDTGTDRIEVTRLNGTMR-KILISEDLEEPRAIVLDPMVGYMYWTDWGEIPKIERAALDGSDRVVLVN 475 (619)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEETTSCSC-EEEECTTCCSEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEEC
T ss_pred eEEecccCcEEEEeCCCCcEEEEeCCCCeE-EEEEECCCCCeeeEEEEcCCCcEEEecCCCCCEEEEEccCCCccEEEEe
Confidence 5554 4 4555556678899999876542 222333345688999999744544443 34678777775443332333
Q ss_pred cCCCcEEEEEEcCCCCcEEEEEcCCCCCeEEEEECCCCcEEEEee-CCCCEEEEEECCCCCeEEEEEecCCCcEEEEECC
Q 014934 331 EHTAAVKAIAWSPHLHGLLASGGGTADRCIRFWNTTTNTHLSCMD-TGSQVCNLVWSKNVNELVSTHGYSQNQIIVWRYP 409 (415)
Q Consensus 331 ~h~~~V~~l~~sp~~~~llasggg~~d~~I~iwd~~t~~~~~~~~-~~~~V~~l~~s~~~~~l~s~~g~~dg~I~vw~~~ 409 (415)
..-.....|++.+.+..|+.+-. ..+.|..+++........+. ......+++...+ .|..+ -...+.|...+..
T Consensus 476 ~~l~~P~GlalD~~~~~LY~aD~--~~~~I~~~~~dG~~~~~~~~~~l~~P~glav~~~--~ly~t-D~~~~~I~~~~k~ 550 (619)
T 3s94_A 476 TSLGWPNGLALDYDEGKIYWGDA--KTDKIEVMNTDGTGRRVLVEDKIPHIFGFTLLGD--YVYWT-DWQRRSIERVHKR 550 (619)
T ss_dssp SSCSCEEEEEEETTTTEEEEEET--TTTEEEEEESSSCCCEEEEECCCCSSCCEEEETT--EEEEE-CTTSSCEEEEESS
T ss_pred CCCCCCeeeEEcccCCEEEEEEC--CCCEEEEEecCCCceEEEeccCCCCcEEEEEECC--EEEEe-ecCCCeEEEEEcC
Confidence 34567889999998777888765 57889999986443222221 1122334454432 44443 3344555555544
Q ss_pred CC
Q 014934 410 TM 411 (415)
Q Consensus 410 s~ 411 (415)
++
T Consensus 551 ~g 552 (619)
T 3s94_A 551 SA 552 (619)
T ss_dssp SC
T ss_pred CC
Confidence 43
No 302
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=97.51 E-value=0.067 Score=50.57 Aligned_cols=218 Identities=10% Similarity=0.076 Sum_probs=121.2
Q ss_pred eeEeecCC-CcEEEEEcCCeEEEEECCCCCeEEeEec----CCCCCeEEEEEcCC---CCeEEEEEC-C-----CcEEEE
Q 014934 170 LNLVDWSS-HNVLAVGLGNCVYLWNACSSKVTKLCDL----GIDDSVCSVGWANR---NTHLAVGTS-H-----GKVQIW 235 (415)
Q Consensus 170 i~~l~ws~-~~~la~~~d~~V~iwd~~~~~~~~~~~~----~~~~~V~~v~~sp~---g~~la~g~~-d-----g~V~iw 235 (415)
...++|.| ++++++-.++.|++++ +++...+..+ ........|+|+|+ +..|.++.. . +.|..|
T Consensus 33 P~~ia~~pdG~l~V~e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v~r~ 110 (352)
T 2ism_A 33 PWALAFLPDGGMLIAERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQVVRL 110 (352)
T ss_dssp EEEEEECTTSCEEEEETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEEEEEE
T ss_pred ceEEEEcCCCeEEEEeCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccEEEEE
Confidence 56889998 6777776779999998 4543333222 12457899999998 555555443 2 568888
Q ss_pred ECCCC-----ee-eEEec---CCCccEEEEEee--CCEEEEEeC-------------CCcEEEEECCCC-----------
Q 014934 236 DASRC-----KR-VRTME---GHRLRVGALAWS--SSLLSSGSR-------------DKSILQRDIRAQ----------- 280 (415)
Q Consensus 236 d~~~~-----~~-~~~l~---~h~~~V~~l~~~--~~~l~sgs~-------------dg~I~iwd~~~~----------- 280 (415)
+.... +. +..+. +.......|+|. +.+.++.+. .|.|..+|....
T Consensus 111 ~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G~~~~~~~~~d~~~~~g~I~ri~~dG~~p~~npf~~~~ 190 (352)
T 2ism_A 111 RHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTGEVYERELAQDLASLGGKILRLTPEGEPAPGNPFLGRR 190 (352)
T ss_dssp EECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECCCTTCGGGGGCTTCSSSEEEEECTTSSBCTTCTTTTCT
T ss_pred EeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEECCCCCCccccCCCCCceEEEEEcCCCCCCCCCcccCCC
Confidence 87643 11 12233 111223577886 344443221 256666666531
Q ss_pred -CccEEEeccccCCeEEEEEeC-CCCEEEEEeCCCc--------EEEEECCC----------------CceeEEeccCCC
Q 014934 281 -EDFVSKLSGHKSEVCGLKWSY-DNRELASGGNDNR--------LFVWNQHS----------------TQPVLKYCEHTA 334 (415)
Q Consensus 281 -~~~~~~~~~h~~~V~~l~~sp-dg~~lasg~~dg~--------I~iwd~~~----------------~~~~~~~~~h~~ 334 (415)
........+|. ...+++|+| +++++++-...+. |.+...-. ..++..+ .+..
T Consensus 191 ~~~~~i~a~G~r-np~g~a~d~~~g~l~v~d~g~~~~~~~~~dei~~i~~G~nyGwp~~~g~~~~~~~~~p~~~~-~~~~ 268 (352)
T 2ism_A 191 GARPEVYSLGHR-NPQGLAWHPKTGELFSSEHGPSGEQGYGHDEVNLIVPGGNYGWPRVVGRGNDPRYRDPLYFW-PQGF 268 (352)
T ss_dssp TSCTTEEEECCS-EECCCEECTTTCCEEEEEECC------CCCEEEEECTTCBCCTTTCCSCCCCTTSCCCSEEC-TTCC
T ss_pred CCCccEEEEcCC-CcccEEEECCCCCEEEEEcCCCCCCCCCCeEEEEeccCCcCCCCcccCCCCCCCCcCCeEec-CCCC
Confidence 00111122332 366789999 6776665333232 44432211 1234444 2334
Q ss_pred cEEEEEEcCCCCcEEEEEcCCCCCeEEEEECCCCc-------EEEEeeCCCCEEEEEECCCCCeEEEE
Q 014934 335 AVKAIAWSPHLHGLLASGGGTADRCIRFWNTTTNT-------HLSCMDTGSQVCNLVWSKNVNELVST 395 (415)
Q Consensus 335 ~V~~l~~sp~~~~llasggg~~d~~I~iwd~~t~~-------~~~~~~~~~~V~~l~~s~~~~~l~s~ 395 (415)
....++| .++. ++++.- ..+.|...++.... ....+.....+..+++.|+|..++++
T Consensus 269 ap~G~~~-~~G~-l~v~~~--~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~~pdG~lyv~~ 332 (352)
T 2ism_A 269 PPGNLAF-FRGD-LYVAGL--RGQALLRLVLEGERGRWRVLRVETALSGFGRLREVQVGPDGALYVTT 332 (352)
T ss_dssp CEEEEEE-ETTE-EEEEET--TTTEEEEEEEEEETTEEEEEEEEEEEESSCCEEEEEECTTSCEEEEE
T ss_pred CCcceEE-ECCE-EEEEEC--CCCEEEEEEECCCCcceeecchheecccCCCeeEEEECCCCcEEEEE
Confidence 5677888 3443 666553 56778877775432 11122344678999999999877775
No 303
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=97.47 E-value=0.01 Score=54.64 Aligned_cols=220 Identities=12% Similarity=0.017 Sum_probs=116.3
Q ss_pred cEEEEEc---CCeEEEEECCCCCeEEeEecCC-CCCeEEEEEcCCCCeEEEEECC----CcEEEEECCCCee--eEEecC
Q 014934 179 NVLAVGL---GNCVYLWNACSSKVTKLCDLGI-DDSVCSVGWANRNTHLAVGTSH----GKVQIWDASRCKR--VRTMEG 248 (415)
Q Consensus 179 ~~la~~~---d~~V~iwd~~~~~~~~~~~~~~-~~~V~~v~~sp~g~~la~g~~d----g~V~iwd~~~~~~--~~~l~~ 248 (415)
.++++|. .+.+++||..+++...+-.... ...-..+. -++..++.|+.+ ..+.+||..+.+- +..+..
T Consensus 13 ~l~~~GG~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~ 90 (306)
T 3ii7_A 13 YRIALFGGSQPQSCRYFNPKDYSWTDIRCPFEKRRDAACVF--WDNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPT 90 (306)
T ss_dssp EEEEEECCSSTTSEEEEETTTTEEEECCCCSCCCBSCEEEE--ETTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSS
T ss_pred eEEEEeCCCCCceEEEecCCCCCEecCCCCCcccceeEEEE--ECCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCc
Confidence 3455553 3579999999988766544322 12222222 367777777754 5688999987653 222322
Q ss_pred CCccEEEEEeeCCEEEEEeCC------CcEEEEECCCCCccEEEeccc---cCCeEEEEEeCCCCEEEEEeC--------
Q 014934 249 HRLRVGALAWSSSLLSSGSRD------KSILQRDIRAQEDFVSKLSGH---KSEVCGLKWSYDNRELASGGN-------- 311 (415)
Q Consensus 249 h~~~V~~l~~~~~~l~sgs~d------g~I~iwd~~~~~~~~~~~~~h---~~~V~~l~~spdg~~lasg~~-------- 311 (415)
.......+...+.+++.|+.+ ..+.+||+.+.. ...+... ...-..+. -++++++.|+.
T Consensus 91 ~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~--W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~ 166 (306)
T 3ii7_A 91 PRDSLAACAAEGKIYTSGGSEVGNSALYLFECYDTRTES--WHTKPSMLTQRCSHGMVE--ANGLIYVCGGSLGNNVSGR 166 (306)
T ss_dssp CCBSCEEEEETTEEEEECCBBTTBSCCCCEEEEETTTTE--EEEECCCSSCCBSCEEEE--ETTEEEEECCEESCTTTCE
T ss_pred cccceeEEEECCEEEEECCCCCCCcEeeeEEEEeCCCCc--eEeCCCCcCCcceeEEEE--ECCEEEEECCCCCCCCccc
Confidence 222233344456777777765 468899988764 2222111 11111222 26677777763
Q ss_pred -CCcEEEEECCCCceeEE--eccCCCcEEEEEEcCCCCcEEEEEcCCC---CCeEEEEECCCCcEEEEeeCC---CCEEE
Q 014934 312 -DNRLFVWNQHSTQPVLK--YCEHTAAVKAIAWSPHLHGLLASGGGTA---DRCIRFWNTTTNTHLSCMDTG---SQVCN 382 (415)
Q Consensus 312 -dg~I~iwd~~~~~~~~~--~~~h~~~V~~l~~sp~~~~llasggg~~---d~~I~iwd~~t~~~~~~~~~~---~~V~~ 382 (415)
-+.+.+||+.+.+-... +.........+.+ + ..+++.||... -..+.+||+.+.+-...-... .....
T Consensus 167 ~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~-~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~ 243 (306)
T 3ii7_A 167 VLNSCEVYDPATETWTELCPMIEARKNHGLVFV--K-DKIFAVGGQNGLGGLDNVEYYDIKLNEWKMVSPMPWKGVTVKC 243 (306)
T ss_dssp ECCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--T-TEEEEECCEETTEEBCCEEEEETTTTEEEECCCCSCCBSCCEE
T ss_pred ccceEEEeCCCCCeEEECCCccchhhcceEEEE--C-CEEEEEeCCCCCCCCceEEEeeCCCCcEEECCCCCCCccceeE
Confidence 34589999987743222 1111111122222 3 34777775211 246889999887533221111 11222
Q ss_pred EEECCCCCeEEEEEecC-----CCcEEEEECCCC
Q 014934 383 LVWSKNVNELVSTHGYS-----QNQIIVWRYPTM 411 (415)
Q Consensus 383 l~~s~~~~~l~s~~g~~-----dg~I~vw~~~s~ 411 (415)
+.+ ++..++. |+. -+.+.+||..+.
T Consensus 244 ~~~--~~~i~v~--GG~~~~~~~~~~~~yd~~~~ 273 (306)
T 3ii7_A 244 AAV--GSIVYVL--AGFQGVGRLGHILEYNTETD 273 (306)
T ss_dssp EEE--TTEEEEE--ECBCSSSBCCEEEEEETTTT
T ss_pred EEE--CCEEEEE--eCcCCCeeeeeEEEEcCCCC
Confidence 222 4555555 443 246888887664
No 304
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=97.47 E-value=0.026 Score=55.93 Aligned_cols=153 Identities=9% Similarity=0.043 Sum_probs=96.2
Q ss_pred CeEEEEEcC-CCCeEEEE-ECCCcEEEEECCCCeeeEEecC---CCccEEEEEe-------e--CCEEEEEeCCC-----
Q 014934 210 SVCSVGWAN-RNTHLAVG-TSHGKVQIWDASRCKRVRTMEG---HRLRVGALAW-------S--SSLLSSGSRDK----- 270 (415)
Q Consensus 210 ~V~~v~~sp-~g~~la~g-~~dg~V~iwd~~~~~~~~~l~~---h~~~V~~l~~-------~--~~~l~sgs~dg----- 270 (415)
....|+|.| ++..|.++ ...+.|++.|++++........ .......|+| + ++.|+++...+
T Consensus 140 ~p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~ 219 (496)
T 3kya_A 140 DNGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDE 219 (496)
T ss_dssp SEEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGG
T ss_pred CCCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCccc
Confidence 577899998 34444444 4446799999988766554432 2246889999 5 56566665554
Q ss_pred --cEEEEECCCCCccE-----EEeccccCCeEEEEEeC-CCCEEEEEeCCCcEEEEECC-------CCce----------
Q 014934 271 --SILQRDIRAQEDFV-----SKLSGHKSEVCGLKWSY-DNRELASGGNDNRLFVWNQH-------STQP---------- 325 (415)
Q Consensus 271 --~I~iwd~~~~~~~~-----~~~~~h~~~V~~l~~sp-dg~~lasg~~dg~I~iwd~~-------~~~~---------- 325 (415)
.|.+++........ ..+... ....+++++| ++.++++-..++.|+.+|+. ++..
T Consensus 220 ~~~V~~i~r~~~G~~~~~~~~~~v~~~-~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g 298 (496)
T 3kya_A 220 SPSVYIIKRNADGTFDDRSDIQLIAAY-KQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPN 298 (496)
T ss_dssp EEEEEEEECCTTSCCSTTSCEEEEEEE-SCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTT
T ss_pred CceEEEEecCCCCceeecccceeeccC-CCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeeccccccccc
Confidence 26667643311111 222222 2456788999 55556666678889999987 4543
Q ss_pred -eEE-ec-cCCCcEEEEEEcCCCCcEEEEEcCCCCCeEEEEEC
Q 014934 326 -VLK-YC-EHTAAVKAIAWSPHLHGLLASGGGTADRCIRFWNT 365 (415)
Q Consensus 326 -~~~-~~-~h~~~V~~l~~sp~~~~llasggg~~d~~I~iwd~ 365 (415)
... +. +.......|+|+|++..|+++-. ....|+.++.
T Consensus 299 ~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~--~~h~I~kid~ 339 (496)
T 3kya_A 299 TFKQLFTIADPSWEFQIFIHPTGKYAYFGVI--NNHYFMRSDY 339 (496)
T ss_dssp TEEEEEECSSSSCCEEEEECTTSSEEEEEET--TTTEEEEEEE
T ss_pred ccceeEecCCCCCceEEEEcCCCCEEEEEeC--CCCEEEEEec
Confidence 112 11 22344689999999987777765 6788998654
No 305
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=97.46 E-value=0.13 Score=52.68 Aligned_cols=228 Identities=9% Similarity=-0.019 Sum_probs=138.2
Q ss_pred CcEEEEEcCCeEEEEECCCCCeE-EeEecCCCCCeEEEEEcCCCCeEEEEE-CCCcEEEEECCCCeeeEEecC------C
Q 014934 178 HNVLAVGLGNCVYLWNACSSKVT-KLCDLGIDDSVCSVGWANRNTHLAVGT-SHGKVQIWDASRCKRVRTMEG------H 249 (415)
Q Consensus 178 ~~~la~~~d~~V~iwd~~~~~~~-~~~~~~~~~~V~~v~~sp~g~~la~g~-~dg~V~iwd~~~~~~~~~l~~------h 249 (415)
..+|.++....|+-..+...... ..+....-..+.+|+|.+.+..|.... ..+.|+.++.........+.. .
T Consensus 308 ~~~Ll~s~~~~i~~i~l~~~~~~~~~l~~~~~~~~~~ld~d~~~~~iy~sD~~~~~I~r~~~~g~~~~~v~~~~~~~~~~ 387 (628)
T 4a0p_A 308 TTFLLFSQKSAINRMVIDEQQSPDIILPIHSLRNVRAIDYDPLDKQLYWIDSRQNMIRKAQEDGSQGFTVVVSSVPSQNL 387 (628)
T ss_dssp SSEEEEEETTEEEEECCCTTCCCCEECCCTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEC--------
T ss_pred cceeeeeccceEEEEecccccCceEEEEehhcCCceEEEEecCCCeEEEEecCcceEEEEEcCCCCceEEEEcccccccc
Confidence 45677777777776665543211 112222335688999998766666554 467788888764332223322 2
Q ss_pred CccEEEEEee--CC-EEEEEeCCCcEEEEECCCCCccEEEeccccCCeEEEEEeC-CCCEEEEEeCCC--cEEEEECCCC
Q 014934 250 RLRVGALAWS--SS-LLSSGSRDKSILQRDIRAQEDFVSKLSGHKSEVCGLKWSY-DNRELASGGNDN--RLFVWNQHST 323 (415)
Q Consensus 250 ~~~V~~l~~~--~~-~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~sp-dg~~lasg~~dg--~I~iwd~~~~ 323 (415)
...+..|+++ ++ +.++-+..+.|.+.++.... ....+........+|++.| .|.++.+-.... .|...++...
T Consensus 388 ~~~p~glAvD~~~~nLY~td~~~~~I~v~~~~G~~-~~~l~~~~l~~Pr~iavdp~~g~ly~tD~g~~~~~I~r~~~dG~ 466 (628)
T 4a0p_A 388 EIQPYDLSIDIYSRYIYWTCEATNVINVTRLDGRS-VGVVLKGEQDRPRAVVVNPEKGYMYFTNLQERSPKIERAALDGT 466 (628)
T ss_dssp CCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCE-EEEEEECTTCCEEEEEEETTTTEEEEEEEETTEEEEEEEETTSC
T ss_pred cCCcceEEeeccCCeEEEEcCCCCEEEEEECCCCe-EEEEEeCCCCceeeEEEecCCCeEEEeecCCCCCeEEEEeCCCC
Confidence 3356777776 44 55666778889999986442 2222333446789999999 555555533332 6777777544
Q ss_pred ceeEEeccCCCcEEEEEEcCCCCcEEEEEcCCCCCeEEEEECCCCcEEEEee--CCCCEEEEEECCCCCeEEEEEecCCC
Q 014934 324 QPVLKYCEHTAAVKAIAWSPHLHGLLASGGGTADRCIRFWNTTTNTHLSCMD--TGSQVCNLVWSKNVNELVSTHGYSQN 401 (415)
Q Consensus 324 ~~~~~~~~h~~~V~~l~~sp~~~~llasggg~~d~~I~iwd~~t~~~~~~~~--~~~~V~~l~~s~~~~~l~s~~g~~dg 401 (415)
.........-.....|++.+.+..|+.+-. ..+.|...++.... ...+. ......+++... + .|..+ -...+
T Consensus 467 ~~~~l~~~~l~~P~gla~D~~~~~LYw~D~--~~~~I~~~~~dG~~-r~~~~~~~~~~P~glav~~-~-~ly~t-D~~~~ 540 (628)
T 4a0p_A 467 EREVLFFSGLSKPIALALDSRLGKLFWADS--DLRRIESSDLSGAN-RIVLEDSNILQPVGLTVFE-N-WLYWI-DKQQQ 540 (628)
T ss_dssp SCEEEECSSCSCEEEEEEETTTTEEEEEET--TTTEEEEEETTSCS-CEEEECSSCSCEEEEEEET-T-EEEEE-ETTTT
T ss_pred CcEEEEeccCCCccEEEEeCCCCEEEEEeC--CCCEEEEEeCCCCc-eEEEEcCCCCCcEEEEEEC-C-EEEEE-ECCCC
Confidence 333333334456799999998877888765 57899999985433 33332 234567777755 3 44443 34556
Q ss_pred cEEEEECCCCc
Q 014934 402 QIIVWRYPTMS 412 (415)
Q Consensus 402 ~I~vw~~~s~~ 412 (415)
.|...+-.+++
T Consensus 541 ~i~~~~k~~G~ 551 (628)
T 4a0p_A 541 MIEKIDMTGRE 551 (628)
T ss_dssp EEEEEETTSSS
T ss_pred eEEEEECcCCC
Confidence 77776665443
No 306
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=97.44 E-value=0.0077 Score=55.41 Aligned_cols=214 Identities=16% Similarity=0.168 Sum_probs=110.5
Q ss_pred CeEEEEECCCCCeEEeEecCCCCCeEEEEEcCCCCeEEEEECC-----CcEEEEECCCCeee--EEecCCCccEEEEEee
Q 014934 187 NCVYLWNACSSKVTKLCDLGIDDSVCSVGWANRNTHLAVGTSH-----GKVQIWDASRCKRV--RTMEGHRLRVGALAWS 259 (415)
Q Consensus 187 ~~V~iwd~~~~~~~~~~~~~~~~~V~~v~~sp~g~~la~g~~d-----g~V~iwd~~~~~~~--~~l~~h~~~V~~l~~~ 259 (415)
..+..||..+.+...+-.+.....-.+++. -++..++.|+.+ ..+.+||..+.+-. ..+.........+.+.
T Consensus 30 ~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~ 108 (302)
T 2xn4_A 30 RSVECYDFKEERWHQVAELPSRRCRAGMVY-MAGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANMRDRRSTLGAAVLN 108 (302)
T ss_dssp CCEEEEETTTTEEEEECCCSSCCBSCEEEE-ETTEEEEESCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEET
T ss_pred CcEEEEcCcCCcEeEcccCCcccccceEEE-ECCEEEEEeCcCCCccccceEEECCCCCceeeCCCCCccccceEEEEEC
Confidence 468999998887665543322111112222 267777777754 35889998876422 2222222233344456
Q ss_pred CCEEEEEeCCC-----cEEEEECCCCCccEEEeccccCC--eEEEEEeCCCCEEEEEeCC-------CcEEEEECCCCce
Q 014934 260 SSLLSSGSRDK-----SILQRDIRAQEDFVSKLSGHKSE--VCGLKWSYDNRELASGGND-------NRLFVWNQHSTQP 325 (415)
Q Consensus 260 ~~~l~sgs~dg-----~I~iwd~~~~~~~~~~~~~h~~~--V~~l~~spdg~~lasg~~d-------g~I~iwd~~~~~~ 325 (415)
+.+++.|+.++ .+.+||+.+.. ...+.....+ -.+++. -++++++.|+.+ +.+.+||+.+.+-
T Consensus 109 ~~iyv~GG~~~~~~~~~~~~~d~~~~~--W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W 185 (302)
T 2xn4_A 109 GLLYAVGGFDGSTGLSSVEAYNIKSNE--WFHVAPMNTRRSSVGVGV-VGGLLYAVGGYDVASRQCLSTVECYNATTNEW 185 (302)
T ss_dssp TEEEEEEEECSSCEEEEEEEEETTTTE--EEEECCCSSCCBSCEEEE-ETTEEEEECCEETTTTEECCCEEEEETTTTEE
T ss_pred CEEEEEcCCCCCccCceEEEEeCCCCe--EeecCCCCCcccCceEEE-ECCEEEEEeCCCCCCCccccEEEEEeCCCCcE
Confidence 77777787654 47788887664 2222211111 112222 266777777643 4589999987643
Q ss_pred eEE--eccCCCcEEEEEEcCCCCcEEEEEcCCC---CCeEEEEECCCCcEEEEeeCC---CCEEEEEECCCCCeEEEEEe
Q 014934 326 VLK--YCEHTAAVKAIAWSPHLHGLLASGGGTA---DRCIRFWNTTTNTHLSCMDTG---SQVCNLVWSKNVNELVSTHG 397 (415)
Q Consensus 326 ~~~--~~~h~~~V~~l~~sp~~~~llasggg~~---d~~I~iwd~~t~~~~~~~~~~---~~V~~l~~s~~~~~l~s~~g 397 (415)
... +.........+.+ +..+++.||... ...+.+||+.+.+-...-... .....+.+ +++.++. |
T Consensus 186 ~~~~~~p~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~--~~~i~v~--G 258 (302)
T 2xn4_A 186 TYIAEMSTRRSGAGVGVL---NNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQVADMNMCRRNAGVCAV--NGLLYVV--G 258 (302)
T ss_dssp EEECCCSSCCBSCEEEEE---TTEEEEECCBSSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEE--C
T ss_pred EECCCCccccccccEEEE---CCEEEEECCCCCCcccceEEEEeCCCCCEeeCCCCCCccccCeEEEE--CCEEEEE--C
Confidence 322 1111111122222 235777775211 246899999887543322111 11111222 4555555 4
Q ss_pred cCC-----CcEEEEECCCC
Q 014934 398 YSQ-----NQIIVWRYPTM 411 (415)
Q Consensus 398 ~~d-----g~I~vw~~~s~ 411 (415)
+.+ +.+.+||..+.
T Consensus 259 G~~~~~~~~~v~~yd~~~~ 277 (302)
T 2xn4_A 259 GDDGSCNLASVEYYNPTTD 277 (302)
T ss_dssp CBCSSSBCCCEEEEETTTT
T ss_pred CcCCCcccccEEEEcCCCC
Confidence 433 35888887653
No 307
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=97.43 E-value=0.00083 Score=70.12 Aligned_cols=201 Identities=9% Similarity=-0.030 Sum_probs=115.9
Q ss_pred eeEeecCC-CcEEEEE--cCCeEEEEECCC----CCeEEeEecCCCCCeEEEEEcCCC-CeEEEEECCCcEEEEECCCCe
Q 014934 170 LNLVDWSS-HNVLAVG--LGNCVYLWNACS----SKVTKLCDLGIDDSVCSVGWANRN-THLAVGTSHGKVQIWDASRCK 241 (415)
Q Consensus 170 i~~l~ws~-~~~la~~--~d~~V~iwd~~~----~~~~~~~~~~~~~~V~~v~~sp~g-~~la~g~~dg~V~iwd~~~~~ 241 (415)
+..|+|++ ++.|.++ ..+.|+.+++.+ .....++. ..-.....|++.+.+ .++++-...+.|.++++....
T Consensus 408 p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~-~~~~~P~glavD~~~g~LY~tD~~~~~I~v~d~dg~~ 486 (699)
T 1n7d_A 408 VVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVIS-RDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVK 486 (699)
T ss_dssp CCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCC-SCC--CCCEECCCSSSBCEECCTTTSCEEEEBSSSCC
T ss_pred eEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEe-CCCCCcceEEEEeeCCcEEEEeccCCeEEEEecCCCc
Confidence 55778887 5555555 346888888875 22222221 112245667887544 444444456789999987544
Q ss_pred eeEEecCCCccEEEEEee--CCEEEEEe-C-CCcEEEEECCCCCccEEEeccccCCeEEEEEeCCCCEE-EEEeCCCcEE
Q 014934 242 RVRTMEGHRLRVGALAWS--SSLLSSGS-R-DKSILQRDIRAQEDFVSKLSGHKSEVCGLKWSYDNREL-ASGGNDNRLF 316 (415)
Q Consensus 242 ~~~~l~~h~~~V~~l~~~--~~~l~sgs-~-dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~spdg~~l-asg~~dg~I~ 316 (415)
....+.........|+++ +..|+... . .+.|..+++..... .......-....+|+|+|++..| ++-...+.|.
T Consensus 487 ~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~-~~l~~~~l~~PnGlavd~~~~~LY~aD~~~~~I~ 565 (699)
T 1n7d_A 487 RKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDI-YSLVTENIQWPNGITLDLLSGRLYWVDSKLHSIS 565 (699)
T ss_dssp EEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCC-CEESCSSCSSCCCEEECTTTCCEEEEETTTTEEE
T ss_pred eEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCe-eEEEeCCCCCccEEEEeccCCEEEEEecCCCeEE
Confidence 333333223345566775 23443333 2 26788887765432 12222223456789999875554 4445667899
Q ss_pred EEECCCCceeEEecc--CCCcEEEEEEcCCCCcEEEEEcCCCCCeEEEEECCCCcEEEEeeC
Q 014934 317 VWNQHSTQPVLKYCE--HTAAVKAIAWSPHLHGLLASGGGTADRCIRFWNTTTNTHLSCMDT 376 (415)
Q Consensus 317 iwd~~~~~~~~~~~~--h~~~V~~l~~sp~~~~llasggg~~d~~I~iwd~~t~~~~~~~~~ 376 (415)
++|+........+.. ......+|++.. ..++++.. ..+.|..+|..+|+.+..+..
T Consensus 566 ~~d~dG~~~~~~~~~~~~~~~P~glavd~--~~lywtd~--~~~~V~~~d~~~G~~~~~i~~ 623 (699)
T 1n7d_A 566 SIDVNGGNRKTILEDEKRLAHPFSLAVFE--DKVFWTDI--INEAIFSANRLTGSDVNLLAE 623 (699)
T ss_dssp EECSSSSCCEEECCCSSSCSSCCCCEEET--TEEEEECS--TTTCEEEEETTTEEEEECCCT
T ss_pred EEccCCCceEEEEecCCcCCCceEeEEEC--CEEEEEeC--CCCeEEEEEccCCCceEEeec
Confidence 999865433222221 122334556644 35777765 678999999988888777653
No 308
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=97.34 E-value=0.042 Score=52.13 Aligned_cols=163 Identities=12% Similarity=0.072 Sum_probs=100.3
Q ss_pred CCCcEEEEECCCC--e--eeEEecC-----CCccEEEEEee----CC-EEEEE-eC--CCcEEEEECCCCCcc---EEEe
Q 014934 228 SHGKVQIWDASRC--K--RVRTMEG-----HRLRVGALAWS----SS-LLSSG-SR--DKSILQRDIRAQEDF---VSKL 287 (415)
Q Consensus 228 ~dg~V~iwd~~~~--~--~~~~l~~-----h~~~V~~l~~~----~~-~l~sg-s~--dg~I~iwd~~~~~~~---~~~~ 287 (415)
.+|.|.++|..+. + .+. +.+ .......|.+. +. +|+++ .. +.+|.+|++...... +..+
T Consensus 81 ~~G~I~~~d~~~~~~~~~~l~-~~g~~~~~~~f~PhGi~~~~d~dg~~~L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~ 159 (355)
T 3sre_A 81 KSGKILLMDLNEKEPAVSELE-IIGNTLDISSFNPHGISTFIDDDNTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTI 159 (355)
T ss_dssp -CCEEEEEETTSSSCCEEECE-EECSSCCGGGCCEEEEEEEECTTCCEEEEEEECSTTCCEEEEEEEETTTTEEEEEEEE
T ss_pred CCCeEEEEecCCCCCceEEEE-ccCCCCCcCceeeeeeEEEECCCCcEEEEEEECCCCCCeEEEEEEECCCCEEEEEecc
Confidence 6889999998732 2 222 222 22356666653 22 34444 33 456777777654322 2233
Q ss_pred ccc-cCCeEEEEEeCCCCEEEEEe-----------------CCCcEEEEECCCCceeEEeccCCCcEEEEEEcCCCCcEE
Q 014934 288 SGH-KSEVCGLKWSYDNRELASGG-----------------NDNRLFVWNQHSTQPVLKYCEHTAAVKAIAWSPHLHGLL 349 (415)
Q Consensus 288 ~~h-~~~V~~l~~spdg~~lasg~-----------------~dg~I~iwd~~~~~~~~~~~~h~~~V~~l~~sp~~~~ll 349 (415)
.+. -...+.+.+.++|.+.++.. ..|.|+-+|.. + +..+...-...+.++|+|+++.++
T Consensus 160 ~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~~--~-~~~~~~~l~~pNGia~spDg~~lY 236 (355)
T 3sre_A 160 RHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSPN--D-VRVVAEGFDFANGINISPDGKYVY 236 (355)
T ss_dssp CCTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECTT--C-CEEEEEEESSEEEEEECTTSSEEE
T ss_pred ccCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEECC--e-EEEeecCCcccCcceECCCCCEEE
Confidence 322 23578999999998887754 12456666653 2 223333345678999999999888
Q ss_pred EEEcCCCCCeEEEEECCC-CcE--EEEeeCCCCEEEEEECC-CCCeEEEEE
Q 014934 350 ASGGGTADRCIRFWNTTT-NTH--LSCMDTGSQVCNLVWSK-NVNELVSTH 396 (415)
Q Consensus 350 asggg~~d~~I~iwd~~t-~~~--~~~~~~~~~V~~l~~s~-~~~~l~s~~ 396 (415)
++-. ..+.|..|++.. +.. ...+......-++++.+ +|+..++++
T Consensus 237 vadt--~~~~I~~~~~~~~g~l~~~~~~~~~g~PDGi~vD~e~G~lwva~~ 285 (355)
T 3sre_A 237 IAEL--LAHKIHVYEKHANWTLTPLRVLSFDTLVDNISVDPVTGDLWVGCH 285 (355)
T ss_dssp EEEG--GGTEEEEEEECTTSCEEEEEEEECSSEEEEEEECTTTCCEEEEEE
T ss_pred EEeC--CCCeEEEEEECCCCcEecCEEEeCCCCCceEEEeCCCCcEEEEec
Confidence 8876 678999999863 432 22334456678899999 599888653
No 309
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=97.34 E-value=0.019 Score=53.20 Aligned_cols=182 Identities=11% Similarity=0.065 Sum_probs=96.4
Q ss_pred EEEEcCCeEEEEECCCCCeEEeEecCC-CCCeEEEEEcCCCCeEEEEEC----C-------CcEEEEECCCCeeeE--Ee
Q 014934 181 LAVGLGNCVYLWNACSSKVTKLCDLGI-DDSVCSVGWANRNTHLAVGTS----H-------GKVQIWDASRCKRVR--TM 246 (415)
Q Consensus 181 la~~~d~~V~iwd~~~~~~~~~~~~~~-~~~V~~v~~sp~g~~la~g~~----d-------g~V~iwd~~~~~~~~--~l 246 (415)
+..| ++.+.+||..+++... ..... ...........++..++.|+. + ..+.+||..+.+-.. .+
T Consensus 8 ~~~G-G~~~~~yd~~~~~W~~-~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~ 85 (315)
T 4asc_A 8 FMIS-EEGAVAYDPAANECYC-ASLSSQVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGMPPL 85 (315)
T ss_dssp EEEE-TTEEEEEETTTTEEEE-EECCCCSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEECCCB
T ss_pred EEEc-CCceEEECCCCCeEec-CCCCCCCCccceEEEEECCEEEEEcCcccCCCCCccccccceEEecCCCCeEEECCCC
Confidence 3344 4789999999988754 33321 123333334457888888873 1 127788988765321 22
Q ss_pred cCCCccEEEEEeeCCEEEEEeCC--------CcEEEEECCCCCccEEEecc---ccCCeEEEEEeCCCCEEEEEeC-C--
Q 014934 247 EGHRLRVGALAWSSSLLSSGSRD--------KSILQRDIRAQEDFVSKLSG---HKSEVCGLKWSYDNRELASGGN-D-- 312 (415)
Q Consensus 247 ~~h~~~V~~l~~~~~~l~sgs~d--------g~I~iwd~~~~~~~~~~~~~---h~~~V~~l~~spdg~~lasg~~-d-- 312 (415)
.........+...+.+++.|+.+ ..+.+||+.+.. ...+.. ....-. ++. -++++++.|+. +
T Consensus 86 p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~--W~~~~~~p~~r~~~~-~~~-~~~~iyv~GG~~~~~ 161 (315)
T 4asc_A 86 PSPRCLFGLGEALNSIYVVGGREIKDGERCLDSVMCYDRLSFK--WGESDPLPYVVYGHT-VLS-HMDLVYVIGGKGSDR 161 (315)
T ss_dssp SSCEESCEEEEETTEEEEECCEESSTTCCBCCCEEEEETTTTE--EEECCCCSSCCBSCE-EEE-ETTEEEEECCBCTTS
T ss_pred CcchhceeEEEECCEEEEEeCCcCCCCCcccceEEEECCCCCc--EeECCCCCCccccee-EEE-ECCEEEEEeCCCCCC
Confidence 21111122333446666777642 458899988764 222211 111111 222 36677777776 2
Q ss_pred ---CcEEEEECCCCceeE--EeccCCCcEEEEEEcCCCCcEEEEEcCCCC---CeEEEEECCCCcEE
Q 014934 313 ---NRLFVWNQHSTQPVL--KYCEHTAAVKAIAWSPHLHGLLASGGGTAD---RCIRFWNTTTNTHL 371 (415)
Q Consensus 313 ---g~I~iwd~~~~~~~~--~~~~h~~~V~~l~~sp~~~~llasggg~~d---~~I~iwd~~t~~~~ 371 (415)
+.+.+||..+.+-.. .+........++.+ ++ .+++.||...+ ..+.+||+.+.+-.
T Consensus 162 ~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~-~iyv~GG~~~~~~~~~~~~yd~~~~~W~ 225 (315)
T 4asc_A 162 KCLNKMCVYDPKKFEWKELAPMQTARSLFGATVH--DG-RIIVAAGVTDTGLTSSAEVYSITDNKWA 225 (315)
T ss_dssp CBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TT-EEEEEEEECSSSEEEEEEEEETTTTEEE
T ss_pred cccceEEEEeCCCCeEEECCCCCCchhceEEEEE--CC-EEEEEeccCCCCccceEEEEECCCCeEE
Confidence 468999988764322 11111111122222 33 47777752111 25889999887543
No 310
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=97.30 E-value=0.029 Score=51.92 Aligned_cols=178 Identities=16% Similarity=0.128 Sum_probs=93.8
Q ss_pred CCeEEEEECCCCCeEEeEecCC-CCCeEEEEEcCCCCeEEEEEC----CC-------cEEEEECCCCeeeE--EecCCCc
Q 014934 186 GNCVYLWNACSSKVTKLCDLGI-DDSVCSVGWANRNTHLAVGTS----HG-------KVQIWDASRCKRVR--TMEGHRL 251 (415)
Q Consensus 186 d~~V~iwd~~~~~~~~~~~~~~-~~~V~~v~~sp~g~~la~g~~----dg-------~V~iwd~~~~~~~~--~l~~h~~ 251 (415)
+..+..||..+++.... .... ...........++..++.|+. ++ .+.+||..+.+-.. .+.....
T Consensus 23 G~~~~~yd~~~~~W~~~-~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~ 101 (318)
T 2woz_A 23 DTAAVAYDPMENECYLT-ALAEQIPRNHSSIVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLPPLPSARC 101 (318)
T ss_dssp SSEEEEEETTTTEEEEE-EECTTSCSSEEEEECSSSCEEEEESSCC-------CCCBEEEEEETTTTEEEECSCBSSCBC
T ss_pred ccceEEECCCCCceecc-cCCccCCccceEEEEECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECCCCCcccc
Confidence 45689999999887653 2221 122233334457788888873 12 17788887764322 2222222
Q ss_pred cEEEEEeeCCEEEEEeCC-------CcEEEEECCCCCccEEEeccccCCe--EEEEEeCCCCEEEEEeC------CCcEE
Q 014934 252 RVGALAWSSSLLSSGSRD-------KSILQRDIRAQEDFVSKLSGHKSEV--CGLKWSYDNRELASGGN------DNRLF 316 (415)
Q Consensus 252 ~V~~l~~~~~~l~sgs~d-------g~I~iwd~~~~~~~~~~~~~h~~~V--~~l~~spdg~~lasg~~------dg~I~ 316 (415)
....+...+.+++.|+.+ ..+.+||+.+.. ...+.....+. .+++. .++++++.|+. -+.+.
T Consensus 102 ~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~--W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~ 178 (318)
T 2woz_A 102 LFGLGEVDDKIYVVAGKDLQTEASLDSVLCYDPVAAK--WSEVKNLPIKVYGHNVIS-HNGMIYCLGGKTDDKKCTNRVF 178 (318)
T ss_dssp SCEEEEETTEEEEEEEEBTTTCCEEEEEEEEETTTTE--EEEECCCSSCEESCEEEE-ETTEEEEECCEESSSCBCCCEE
T ss_pred ccceEEECCEEEEEcCccCCCCcccceEEEEeCCCCC--EeECCCCCCcccccEEEE-ECCEEEEEcCCCCCCCccceEE
Confidence 223344456777777764 247888987664 22221111111 11222 36777777764 24599
Q ss_pred EEECCCCceeEE--eccCCCcEEEEEEcCCCCcEEEEEcCCCC---CeEEEEECCCCcE
Q 014934 317 VWNQHSTQPVLK--YCEHTAAVKAIAWSPHLHGLLASGGGTAD---RCIRFWNTTTNTH 370 (415)
Q Consensus 317 iwd~~~~~~~~~--~~~h~~~V~~l~~sp~~~~llasggg~~d---~~I~iwd~~t~~~ 370 (415)
+||+.+.+-... +........++.+ + ..+++.||...+ ..+.+||+.+.+-
T Consensus 179 ~yd~~~~~W~~~~~~p~~r~~~~~~~~--~-~~iyv~GG~~~~~~~~~~~~yd~~~~~W 234 (318)
T 2woz_A 179 IYNPKKGDWKDLAPMKTPRSMFGVAIH--K-GKIVIAGGVTEDGLSASVEAFDLKTNKW 234 (318)
T ss_dssp EEETTTTEEEEECCCSSCCBSCEEEEE--T-TEEEEEEEEETTEEEEEEEEEETTTCCE
T ss_pred EEcCCCCEEEECCCCCCCcccceEEEE--C-CEEEEEcCcCCCCccceEEEEECCCCeE
Confidence 999987643222 1111111122222 3 357777752222 3577899988754
No 311
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=97.30 E-value=0.016 Score=54.16 Aligned_cols=157 Identities=10% Similarity=0.168 Sum_probs=103.0
Q ss_pred CCCeEEEEEcCCCCeEEEEE-CCCcEEEEECCCCeeeEE-ecC----C--CccEEEEEe---eC-C-EEEEEe-------
Q 014934 208 DDSVCSVGWANRNTHLAVGT-SHGKVQIWDASRCKRVRT-MEG----H--RLRVGALAW---SS-S-LLSSGS------- 267 (415)
Q Consensus 208 ~~~V~~v~~sp~g~~la~g~-~dg~V~iwd~~~~~~~~~-l~~----h--~~~V~~l~~---~~-~-~l~sgs------- 267 (415)
.-..-+++|.+....|.+++ ..|+|..||...+..... +.+ . ...+..|.| .+ . ++++..
T Consensus 12 ~~yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~ 91 (334)
T 2p9w_A 12 NLTPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNF 91 (334)
T ss_dssp TCCCSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCT
T ss_pred ccCCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEcccccccc
Confidence 34556789988666666666 789999999976543333 222 1 124688999 43 3 444333
Q ss_pred ------CCCcEEEEECC---CCCccEE-Eecccc-----------CCeEEEEEeCCCCEEEEEeCC-CcEEEEECCCCce
Q 014934 268 ------RDKSILQRDIR---AQEDFVS-KLSGHK-----------SEVCGLKWSYDNRELASGGND-NRLFVWNQHSTQP 325 (415)
Q Consensus 268 ------~dg~I~iwd~~---~~~~~~~-~~~~h~-----------~~V~~l~~spdg~~lasg~~d-g~I~iwd~~~~~~ 325 (415)
.+..|..+|+. +++.... .+.... .....++..++|+..++++.- +.|..++.... .
T Consensus 92 ~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~pdG~-~ 170 (334)
T 2p9w_A 92 ADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVSADGK-T 170 (334)
T ss_dssp TSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEECTTSC-C
T ss_pred cccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEEEeCCCC-E
Confidence 26779999998 5553222 222111 247899999999999999888 88888887544 2
Q ss_pred eEEec------cCCCcEEEEEEcCCCCcEEEEEcCCCCCeEEEEECCCC
Q 014934 326 VLKYC------EHTAAVKAIAWSPHLHGLLASGGGTADRCIRFWNTTTN 368 (415)
Q Consensus 326 ~~~~~------~h~~~V~~l~~sp~~~~llasggg~~d~~I~iwd~~t~ 368 (415)
+..+. ......+.|+++|++..|++.. ..+.|..+|+.+.
T Consensus 171 ~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~---~~g~L~~fD~~~p 216 (334)
T 2p9w_A 171 VSTFAWESGNGGQRPGYSGITFDPHSNKLIAFG---GPRALTAFDVSKP 216 (334)
T ss_dssp EEEEEECCCCSSSCCSCSEEEEETTTTEEEEES---SSSSEEEEECSSS
T ss_pred EeeeeecCCCcccccCcceEEEeCCCCEEEEEc---CCCeEEEEcCCCC
Confidence 22221 1122367899999998555554 3899999998853
No 312
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=97.27 E-value=0.083 Score=58.10 Aligned_cols=220 Identities=7% Similarity=0.038 Sum_probs=124.6
Q ss_pred EEEEEcCCeEEEEECCCCCeEEeEecCCCCCeEEEEEcCCCCeEEEEECC------------------------------
Q 014934 180 VLAVGLGNCVYLWNACSSKVTKLCDLGIDDSVCSVGWANRNTHLAVGTSH------------------------------ 229 (415)
Q Consensus 180 ~la~~~d~~V~iwd~~~~~~~~~~~~~~~~~V~~v~~sp~g~~la~g~~d------------------------------ 229 (415)
-+++..++.++|..+..-+......+.-...+..++++|+.+.++++..+
T Consensus 708 g~v~~~~~~LrI~~i~~~~~~~~~~ipL~~Tprri~y~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 (1158)
T 3ei3_A 708 SLALANNSTLTIGTIDEIQKLHIRTVPLYESPRKICYQEVSQCFGVLSSRIEVQDTSGGTTALRPSASTQALSSSVSSSK 787 (1158)
T ss_dssp EEEEECSSCEEEEEECCSSSEEEEEEECSSEEEEEEEEGGGTEEEEEEEEEEEECSSSSEEESSCCHHHHCSEEEECCCC
T ss_pred cEEEEcCCceEEEEecccCCeeEEEEeCCCCceEEEEcCCCCEEEEEEEeccccccccccchhhhhhhhhhhhhcccccc
Confidence 34445566688887654332222222334678888888877765554321
Q ss_pred -------------------CcEEEEECCCCeeeEEec-CCCccEEEEEe---e---CCEEEEEe----------CCCcEE
Q 014934 230 -------------------GKVQIWDASRCKRVRTME-GHRLRVGALAW---S---SSLLSSGS----------RDKSIL 273 (415)
Q Consensus 230 -------------------g~V~iwd~~~~~~~~~l~-~h~~~V~~l~~---~---~~~l~sgs----------~dg~I~ 273 (415)
+.|++.|..+.+.+..+. .....+.+++. . ..+|++|. ..|.|+
T Consensus 788 ~~~~~~~~~~~~~g~~~~~s~i~lidp~t~~~i~~~~l~~nE~~~sv~~v~~~~~~~~~lvVGTa~~~~~e~~~~~Gri~ 867 (1158)
T 3ei3_A 788 LFSSSTAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIV 867 (1158)
T ss_dssp CC----------CCCEEEEEEEEEEETTTCCEEEEEECCTTEEEEEEEEECCTTCCCCEEEEEEEECCTTCSSCCCEEEE
T ss_pred cccccccCchhhcCCceeeEEEEEEeCCCCeEEEEEeCCCCcceEEEEEEEEccCCCEEEEEEeeecCCCCCCCCceEEE
Confidence 236777777777665543 23345555553 2 26788886 347899
Q ss_pred EEECCCCCccEEEeccccCCeEEEEEeCCCCEEEEEeCCCcEEEEECCCCceeE-EeccCCC-cEEEEEEcCCCCcEEEE
Q 014934 274 QRDIRAQEDFVSKLSGHKSEVCGLKWSYDNRELASGGNDNRLFVWNQHSTQPVL-KYCEHTA-AVKAIAWSPHLHGLLAS 351 (415)
Q Consensus 274 iwd~~~~~~~~~~~~~h~~~V~~l~~spdg~~lasg~~dg~I~iwd~~~~~~~~-~~~~h~~-~V~~l~~sp~~~~llas 351 (415)
++++...+-........++.|.+|+-- +|+ |++|- .++|+||++...+.+. ....+.. .+..+.. .+. +++.
T Consensus 868 vf~v~~~kL~lv~~~~v~g~v~al~~~-~g~-Lla~i-g~~l~vy~l~~~~~L~~~~~~~~~i~~~~l~~--~~~-~I~v 941 (1158)
T 3ei3_A 868 VFQYSDGKLQTVAEKEVKGAVYSMVEF-NGK-LLASI-NSTVRLYEWTTEKELRTECNHYNNIMALYLKT--KGD-FILV 941 (1158)
T ss_dssp EEEEETTEEEEEEEEEESSCEEEEEEE-TTE-EEEEE-TTEEEEEEECTTSCEEEEEEECCCSCEEEEEE--ETT-EEEE
T ss_pred EEEEECCEEEEEEEEEcCCcCEEEeee-CCE-EEEEc-CCEEEEEECCCCceEEEEeeccccEEEEEEec--cCC-EEEE
Confidence 999874331111122346778887744 454 44443 3689999998765444 1111111 1223433 344 4555
Q ss_pred EcCCCCCeEEE--EECCCCcEEEEee--CCCCEEEEEECCCCCeEEEEEecCCCcEEEEECCC
Q 014934 352 GGGTADRCIRF--WNTTTNTHLSCMD--TGSQVCNLVWSKNVNELVSTHGYSQNQIIVWRYPT 410 (415)
Q Consensus 352 ggg~~d~~I~i--wd~~t~~~~~~~~--~~~~V~~l~~s~~~~~l~s~~g~~dg~I~vw~~~s 410 (415)
|. .-..|.+ |+...++....-+ ....++++.+-.++ .++. +..+|.|.+..++.
T Consensus 942 gD--~~~Sv~~~~y~~~~~~L~~~a~D~~~~~vta~~~ld~~-t~l~--aD~~gNl~vl~~~~ 999 (1158)
T 3ei3_A 942 GD--LMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDD-NFLG--AENAFNLFVCQKDS 999 (1158)
T ss_dssp EE--SSBCEEEEEEETTTTEEEEEEECCSCBCEEEEEEEETT-EEEE--EETTSEEEEEEECT
T ss_pred EE--hhheEEEEEEEcCCCeEEEEEeecccccEEEEEEEccC-cEEE--EcCCCcEEEEecCC
Confidence 53 4455555 4544444333222 34568888887555 4555 57899999998875
No 313
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=97.19 E-value=0.034 Score=50.91 Aligned_cols=185 Identities=12% Similarity=0.148 Sum_probs=100.3
Q ss_pred CcEEEEEc-C-----CeEEEEECCCCC---eEEeEecCCC-CCeEEEEEcCCCCeEEEEECC-----CcEEEEECCCCe-
Q 014934 178 HNVLAVGL-G-----NCVYLWNACSSK---VTKLCDLGID-DSVCSVGWANRNTHLAVGTSH-----GKVQIWDASRCK- 241 (415)
Q Consensus 178 ~~~la~~~-d-----~~V~iwd~~~~~---~~~~~~~~~~-~~V~~v~~sp~g~~la~g~~d-----g~V~iwd~~~~~- 241 (415)
+.++++|. + +.+++||..+.+ ...+..+... ....++.+ +++.++.|+.+ ..+.+||+.+.+
T Consensus 63 ~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~d~~~~~W 140 (301)
T 2vpj_A 63 DRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVRRGLAGATTL--GDMIYVSGGFDGSRRHTSMERYDPNIDQW 140 (301)
T ss_dssp TEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCEEEEEETTTTEE
T ss_pred CEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCCCccceeEEEE--CCEEEEEcccCCCcccceEEEEcCCCCeE
Confidence 45555553 2 469999999888 6665443221 12222222 67777777654 358899987764
Q ss_pred -eeEEecCCCccEEEEEeeCCEEEEEeCC-----CcEEEEECCCCCccEEEeccccCC--eEEEEEeCCCCEEEEEeCC-
Q 014934 242 -RVRTMEGHRLRVGALAWSSSLLSSGSRD-----KSILQRDIRAQEDFVSKLSGHKSE--VCGLKWSYDNRELASGGND- 312 (415)
Q Consensus 242 -~~~~l~~h~~~V~~l~~~~~~l~sgs~d-----g~I~iwd~~~~~~~~~~~~~h~~~--V~~l~~spdg~~lasg~~d- 312 (415)
.+..+........++...+.+++.|+.+ ..+.+||+.+.. ...+.....+ -.++.. -++++++.|+.+
T Consensus 141 ~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~--W~~~~~~p~~r~~~~~~~-~~~~i~v~GG~~~ 217 (301)
T 2vpj_A 141 SMLGDMQTAREGAGLVVASGVIYCLGGYDGLNILNSVEKYDPHTGH--WTNVTPMATKRSGAGVAL-LNDHIYVVGGFDG 217 (301)
T ss_dssp EEEEECSSCCBSCEEEEETTEEEEECCBCSSCBCCCEEEEETTTTE--EEEECCCSSCCBSCEEEE-ETTEEEEECCBCS
T ss_pred EECCCCCCCcccceEEEECCEEEEECCCCCCcccceEEEEeCCCCc--EEeCCCCCcccccceEEE-ECCEEEEEeCCCC
Confidence 3333332222233444456777777755 458899988765 2222211111 112222 267777887764
Q ss_pred ----CcEEEEECCCCceeEE--eccCCCcEEEEEEcCCCCcEEEEEcCCCC---CeEEEEECCCCcE
Q 014934 313 ----NRLFVWNQHSTQPVLK--YCEHTAAVKAIAWSPHLHGLLASGGGTAD---RCIRFWNTTTNTH 370 (415)
Q Consensus 313 ----g~I~iwd~~~~~~~~~--~~~h~~~V~~l~~sp~~~~llasggg~~d---~~I~iwd~~t~~~ 370 (415)
+.+.+||+.+.+-... +........++.+ ++ .+++.||.... ..|.+||+.+.+-
T Consensus 218 ~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~-~i~v~GG~~~~~~~~~v~~yd~~~~~W 281 (301)
T 2vpj_A 218 TAHLSSVEAYNIRTDSWTTVTSMTTPRCYVGATVL--RG-RLYAIAGYDGNSLLSSIECYDPIIDSW 281 (301)
T ss_dssp SSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TT-EEEEECCBCSSSBEEEEEEEETTTTEE
T ss_pred CcccceEEEEeCCCCcEEECCCCCCcccceeEEEE--CC-EEEEEcCcCCCcccccEEEEcCCCCeE
Confidence 4699999987653322 1111111222222 33 47777751111 4678889887653
No 314
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=97.14 E-value=0.015 Score=53.72 Aligned_cols=213 Identities=15% Similarity=0.095 Sum_probs=110.2
Q ss_pred CeEEEEECCCCCeEEeEecCCCCCeEEEEEcCCCCeEEEEEC----C-----CcEEEEECCCCee--eEEecCCCccEEE
Q 014934 187 NCVYLWNACSSKVTKLCDLGIDDSVCSVGWANRNTHLAVGTS----H-----GKVQIWDASRCKR--VRTMEGHRLRVGA 255 (415)
Q Consensus 187 ~~V~iwd~~~~~~~~~~~~~~~~~V~~v~~sp~g~~la~g~~----d-----g~V~iwd~~~~~~--~~~l~~h~~~V~~ 255 (415)
..+.+||..+.+...+-.+.....-.+++. -++.+++.|+. + ..+.+||+.+.+- +..+.........
T Consensus 39 ~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~ 117 (308)
T 1zgk_A 39 SYLEAYNPSNGTWLRLADLQVPRSGLAGCV-VGGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCAPMSVPRNRIGV 117 (308)
T ss_dssp CCEEEEETTTTEEEECCCCSSCCBSCEEEE-ETTEEEEECCEEEETTEEEECCCEEEEETTTTEEEECCCCSSCCBTCEE
T ss_pred ceEEEEcCCCCeEeECCCCCcccccceEEE-ECCEEEEECCCcCCCCCCeecceEEEECCCCCeEeECCCCCcCccccEE
Confidence 469999999888766543322111112222 26677777765 2 4688999877642 2222222223334
Q ss_pred EEeeCCEEEEEeCC-----CcEEEEECCCCCccEEEecc---ccCCeEEEEEeCCCCEEEEEeCC-----CcEEEEECCC
Q 014934 256 LAWSSSLLSSGSRD-----KSILQRDIRAQEDFVSKLSG---HKSEVCGLKWSYDNRELASGGND-----NRLFVWNQHS 322 (415)
Q Consensus 256 l~~~~~~l~sgs~d-----g~I~iwd~~~~~~~~~~~~~---h~~~V~~l~~spdg~~lasg~~d-----g~I~iwd~~~ 322 (415)
+.+++.+++.|+.+ ..+.+||+.+.. ...+.. ....-..+.+ ++.+++.|+.+ +.+.+||+.+
T Consensus 118 ~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~--W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~ 193 (308)
T 1zgk_A 118 GVIDGHIYAVGGSHGCIHHNSVERYEPERDE--WHLVAPMLTRRIGVGVAVL--NRLLYAVGGFDGTNRLNSAECYYPER 193 (308)
T ss_dssp EEETTEEEEECCEETTEECCCEEEEETTTTE--EEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCCEEEEETTT
T ss_pred EEECCEEEEEcCCCCCcccccEEEECCCCCe--EeECCCCCccccceEEEEE--CCEEEEEeCCCCCCcCceEEEEeCCC
Confidence 44556677777644 358889987764 122211 1111122222 67777777754 4689999877
Q ss_pred CceeEE--eccCCCcEEEEEEcCCCCcEEEEEcCCC---CCeEEEEECCCCcEEEEee--CC-CCEEEEEECCCCCeEEE
Q 014934 323 TQPVLK--YCEHTAAVKAIAWSPHLHGLLASGGGTA---DRCIRFWNTTTNTHLSCMD--TG-SQVCNLVWSKNVNELVS 394 (415)
Q Consensus 323 ~~~~~~--~~~h~~~V~~l~~sp~~~~llasggg~~---d~~I~iwd~~t~~~~~~~~--~~-~~V~~l~~s~~~~~l~s 394 (415)
.+-... +........++.+ +..+++.||... -..+.+||+.+.+-...-. .. .....+.+ +++.++.
T Consensus 194 ~~W~~~~~~p~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~ 268 (308)
T 1zgk_A 194 NEWRMITAMNTIRSGAGVCVL---HNCIYAAGGYDGQDQLNSVERYDVETETWTFVAPMKHRRSALGITVH--QGRIYVL 268 (308)
T ss_dssp TEEEECCCCSSCCBSCEEEEE---TTEEEEECCBCSSSBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEE
T ss_pred CeEeeCCCCCCccccceEEEE---CCEEEEEeCCCCCCccceEEEEeCCCCcEEECCCCCCCccceEEEEE--CCEEEEE
Confidence 643211 1111111222333 334777775211 2568999998875432211 11 11112222 4555554
Q ss_pred EEecC-----CCcEEEEECCCC
Q 014934 395 THGYS-----QNQIIVWRYPTM 411 (415)
Q Consensus 395 ~~g~~-----dg~I~vw~~~s~ 411 (415)
|+. -+.+.+||..+.
T Consensus 269 --GG~~~~~~~~~v~~yd~~~~ 288 (308)
T 1zgk_A 269 --GGYDGHTFLDSVECYDPDTD 288 (308)
T ss_dssp --CCBCSSCBCCEEEEEETTTT
T ss_pred --cCcCCCcccceEEEEcCCCC
Confidence 443 246788887654
No 315
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=97.12 E-value=0.041 Score=53.05 Aligned_cols=140 Identities=11% Similarity=0.126 Sum_probs=98.8
Q ss_pred CCcEEEEEcCCeEEEEECCCCCeEEeEecCC---CCCeEEEEEcCCCCeEEEEECCCcEEEEECCCCe------------
Q 014934 177 SHNVLAVGLGNCVYLWNACSSKVTKLCDLGI---DDSVCSVGWANRNTHLAVGTSHGKVQIWDASRCK------------ 241 (415)
Q Consensus 177 ~~~~la~~~d~~V~iwd~~~~~~~~~~~~~~---~~~V~~v~~sp~g~~la~g~~dg~V~iwd~~~~~------------ 241 (415)
.+.-|.+..++.|+.-++..+...+.+...+ -+.|..+..+|+|++||+.+.. .|.|..+..+.
T Consensus 31 n~t~i~~a~~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g~~-~V~Vv~LP~~~~~~~~~~~~~~~ 109 (452)
T 3pbp_A 31 NGTRIVFIQDNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGDLLCLFNDN-EIFVMEVPWGYSNVEDVSIQDAF 109 (452)
T ss_dssp TTTEEEEEETTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSSEEEEECSS-EEEEEECCTTCSCCCCHHHHHTT
T ss_pred CCCEEEEEECCEEEEEECCCCCcceEEecCcccccCceeEEEECCCCCEEEEecCC-eEEEEEecCccccCccccccccc
Confidence 3556777778899988887555556665542 2368889999999999997655 78888876221
Q ss_pred eeEEecC------CCccEEEEEeeC-----CEEEEEeCCCcEEEEECCCCC-ccEEEec---------cccCCeEEEEEe
Q 014934 242 RVRTMEG------HRLRVGALAWSS-----SLLSSGSRDKSILQRDIRAQE-DFVSKLS---------GHKSEVCGLKWS 300 (415)
Q Consensus 242 ~~~~l~~------h~~~V~~l~~~~-----~~l~sgs~dg~I~iwd~~~~~-~~~~~~~---------~h~~~V~~l~~s 300 (415)
..+.+.- ...+|..+.|+| ..|++-..|+.|++||+.... .+. .+. .....|.+++|.
T Consensus 110 q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~-~L~k~~~~fg~d~~~~ev~S~~Fg 188 (452)
T 3pbp_A 110 QIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPI-VLNKPNNSFGLDARVNDITDLEFS 188 (452)
T ss_dssp EEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCE-EESCCCSEEESCSSCCCEEEEEEC
T ss_pred ceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCc-chhccccccCCCcccceEEEEEEc
Confidence 1122321 357799999994 689999999999999998632 122 222 223679999999
Q ss_pred CCCCEEEEEe--CCCcEEEE
Q 014934 301 YDNRELASGG--NDNRLFVW 318 (415)
Q Consensus 301 pdg~~lasg~--~dg~I~iw 318 (415)
.++-.|.... ..|.|+-.
T Consensus 189 ~~~lTLYvl~~t~~GDIYAl 208 (452)
T 3pbp_A 189 KDGLTLYCLNTTEGGDIFAF 208 (452)
T ss_dssp TTSSCEEEEECTTSCEEEEE
T ss_pred CCCcEEEEEecCCCCCEEEE
Confidence 9887777755 77877654
No 316
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=97.07 E-value=0.38 Score=50.20 Aligned_cols=224 Identities=11% Similarity=0.124 Sum_probs=135.6
Q ss_pred ceeEeecCCCcEEEEEcCCeEEEEECCCCCeEEeEec--CCCCCeEEEEEcCCCCeEEEEECCCcEEEEECCCCeeeEEe
Q 014934 169 YLNLVDWSSHNVLAVGLGNCVYLWNACSSKVTKLCDL--GIDDSVCSVGWANRNTHLAVGTSHGKVQIWDASRCKRVRTM 246 (415)
Q Consensus 169 ~i~~l~ws~~~~la~~~d~~V~iwd~~~~~~~~~~~~--~~~~~V~~v~~sp~g~~la~g~~dg~V~iwd~~~~~~~~~l 246 (415)
.|+++.-.....|=+|..+.+..||-.. ....... .....|.++....+| .|.+|+.+| +..||..+.+.....
T Consensus 23 ~V~~I~qD~~G~lWigT~~GL~ryDG~~--~~~~~~~~~~~~~~i~~i~~d~~g-~lWigT~~G-l~~yd~~~~~f~~~~ 98 (758)
T 3ott_A 23 VVSCFLQDSEGLIWIGSNKGLFSYDGYS--TQQHFTYGENNNTRIYCGVIIDNT-YLYMGTDNG-ILVYNYRADRYEQPE 98 (758)
T ss_dssp CEEEEEECTTSCEEEEESSCEEEECSSC--EEECSCTTSTTSSCEEEEEEETTT-EEEEEETTE-EEEEETTTTEECCCS
T ss_pred eEEEEEECCCCCEEEEECCCccccCCCc--eEEEEccCCCCCceEEEEEEcCCC-cEEEEeCCC-eEEEeCCCCEEECcc
Confidence 5788887775555566566688887432 1111110 123568888777665 577788776 789998876543211
Q ss_pred cCCCccEEEEEeeCCEEEEEeCCCcEEEEECCCCCccEEEec-----cccCCeEEEEEeCCCCEEEEEeCCCcEEEEECC
Q 014934 247 EGHRLRVGALAWSSSLLSSGSRDKSILQRDIRAQEDFVSKLS-----GHKSEVCGLKWSYDNRELASGGNDNRLFVWNQH 321 (415)
Q Consensus 247 ~~h~~~V~~l~~~~~~l~sgs~dg~I~iwd~~~~~~~~~~~~-----~h~~~V~~l~~spdg~~lasg~~dg~I~iwd~~ 321 (415)
......|.++......|..|+.+ -|..+|..+.. ...+. .....|.++....+|.+.+ |+.+ -|..+|..
T Consensus 99 ~~~~~~i~~i~~~~g~lWigt~~-Gl~~~~~~~~~--~~~~~~~~~~l~~~~i~~i~~d~~g~lWi-gt~~-Gl~~~~~~ 173 (758)
T 3ott_A 99 TDFPTDVRTMALQGDTLWLGALN-GLYTYQLQSRK--LTSFDTRRNGLPNNTIYSIIRTKDNQIYV-GTYN-GLCRYIPS 173 (758)
T ss_dssp CCCCSCEEEEEEETTEEEEEETT-EEEEEETTTCC--EEEECHHHHCCSCSCEEEEEECTTCCEEE-EETT-EEEEEETT
T ss_pred cCCCceEEEEEecCCcEEEEcCC-cceeEeCCCCe--EEEeccCCCCcCCCeEEEEEEcCCCCEEE-EeCC-CHhhCccC
Confidence 11233577776666778888776 58889987654 23331 1134688888887887665 4444 48888987
Q ss_pred CCceeEEecc------CCCcEEEEEEcCCCCcEEEEEcCCCCCeEEEEECCCCcEEEEee-CCCCEEEEEECCCCCeEEE
Q 014934 322 STQPVLKYCE------HTAAVKAIAWSPHLHGLLASGGGTADRCIRFWNTTTNTHLSCMD-TGSQVCNLVWSKNVNELVS 394 (415)
Q Consensus 322 ~~~~~~~~~~------h~~~V~~l~~sp~~~~llasggg~~d~~I~iwd~~t~~~~~~~~-~~~~V~~l~~s~~~~~l~s 394 (415)
+++.. .+.. ....|.++....++..|.+.. ++-|..+|..+++...... ....|.++....+|...+.
T Consensus 174 ~~~~~-~~~~~~~~~~~~~~i~~i~~d~~~~~lWigt----~~Gl~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWig 248 (758)
T 3ott_A 174 NGKFE-GIPLPVHSSQSNLFVNSLLEDTTRQCVWIGT----EGYLFQYFPSTGQIKQTEAFHNNSIKSLALDGNGDLLAG 248 (758)
T ss_dssp TTEEE-EECCCCCTTCSSCCEEEEEEETTTTEEEEEE----EEEEEEEETTTTEEEEEEEEEEEEEEEEEECTTCCEEEE
T ss_pred CCceE-EecCCCccccccceeEEEEEECCCCEEEEEE----CCCCeEEcCCCCeEEeccCCCCCeEEEEEEcCCCCEEEE
Confidence 66532 2211 122488888877665444422 3458889988765432111 2345888888888887765
Q ss_pred EEecCCCcEEEEECCC
Q 014934 395 THGYSQNQIIVWRYPT 410 (415)
Q Consensus 395 ~~g~~dg~I~vw~~~s 410 (415)
+ . +-|.+++..+
T Consensus 249 T---~-~Gl~~~~~~~ 260 (758)
T 3ott_A 249 T---D-NGLYVYHNDT 260 (758)
T ss_dssp E---T-TEEEEECCTT
T ss_pred e---C-CceeEEecCC
Confidence 3 2 3466776543
No 317
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=97.04 E-value=0.031 Score=51.23 Aligned_cols=185 Identities=18% Similarity=0.211 Sum_probs=99.1
Q ss_pred CCcEEEEEc-C-----CeEEEEECCCCCeEEeEecCCC-CCeEEEEEcCCCCeEEEEECCC-----cEEEEECCCCeeeE
Q 014934 177 SHNVLAVGL-G-----NCVYLWNACSSKVTKLCDLGID-DSVCSVGWANRNTHLAVGTSHG-----KVQIWDASRCKRVR 244 (415)
Q Consensus 177 ~~~~la~~~-d-----~~V~iwd~~~~~~~~~~~~~~~-~~V~~v~~sp~g~~la~g~~dg-----~V~iwd~~~~~~~~ 244 (415)
.+.++++|. + ..+.+||..+.+...+-..... ....++.+ ++..++.|+.++ .+.+||+.+.+-..
T Consensus 61 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~ 138 (302)
T 2xn4_A 61 AGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANMRDRRSTLGAAVL--NGLLYAVGGFDGSTGLSSVEAYNIKSNEWFH 138 (302)
T ss_dssp TTEEEEESCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEEEEECSSCEEEEEEEEETTTTEEEE
T ss_pred CCEEEEEeCcCCCccccceEEECCCCCceeeCCCCCccccceEEEEE--CCEEEEEcCCCCCccCceEEEEeCCCCeEee
Confidence 345555553 2 3699999998877666543222 12222222 677788887654 47889987764322
Q ss_pred --EecCCCccEEEEEeeCCEEEEEeCC-------CcEEEEECCCCCccEEEecc---ccCCeEEEEEeCCCCEEEEEeCC
Q 014934 245 --TMEGHRLRVGALAWSSSLLSSGSRD-------KSILQRDIRAQEDFVSKLSG---HKSEVCGLKWSYDNRELASGGND 312 (415)
Q Consensus 245 --~l~~h~~~V~~l~~~~~~l~sgs~d-------g~I~iwd~~~~~~~~~~~~~---h~~~V~~l~~spdg~~lasg~~d 312 (415)
.+........++.+.+.+++.|+.+ ..+.+||+.+.. ...+.. ..... ++.. -++++++.|+.+
T Consensus 139 ~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~--W~~~~~~p~~r~~~-~~~~-~~~~iyv~GG~~ 214 (302)
T 2xn4_A 139 VAPMNTRRSSVGVGVVGGLLYAVGGYDVASRQCLSTVECYNATTNE--WTYIAEMSTRRSGA-GVGV-LNNLLYAVGGHD 214 (302)
T ss_dssp ECCCSSCCBSCEEEEETTEEEEECCEETTTTEECCCEEEEETTTTE--EEEECCCSSCCBSC-EEEE-ETTEEEEECCBS
T ss_pred cCCCCCcccCceEEEECCEEEEEeCCCCCCCccccEEEEEeCCCCc--EEECCCCccccccc-cEEE-ECCEEEEECCCC
Confidence 2222222233344456677776643 358899998764 222211 11111 2222 267778888764
Q ss_pred -----CcEEEEECCCCceeEE--eccCCCcEEEEEEcCCCCcEEEEEcCCC---CCeEEEEECCCCcE
Q 014934 313 -----NRLFVWNQHSTQPVLK--YCEHTAAVKAIAWSPHLHGLLASGGGTA---DRCIRFWNTTTNTH 370 (415)
Q Consensus 313 -----g~I~iwd~~~~~~~~~--~~~h~~~V~~l~~sp~~~~llasggg~~---d~~I~iwd~~t~~~ 370 (415)
+.+.+||+.+.+-... +.........+.+ ++ .+++.||... -..+.+||+.+.+-
T Consensus 215 ~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~--~~-~i~v~GG~~~~~~~~~v~~yd~~~~~W 279 (302)
T 2xn4_A 215 GPLVRKSVEVYDPTTNAWRQVADMNMCRRNAGVCAV--NG-LLYVVGGDDGSCNLASVEYYNPTTDKW 279 (302)
T ss_dssp SSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TT-EEEEECCBCSSSBCCCEEEEETTTTEE
T ss_pred CCcccceEEEEeCCCCCEeeCCCCCCccccCeEEEE--CC-EEEEECCcCCCcccccEEEEcCCCCeE
Confidence 4699999987643321 1111111122222 33 4777775211 13488999887653
No 318
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=96.97 E-value=0.094 Score=49.55 Aligned_cols=140 Identities=9% Similarity=0.162 Sum_probs=82.9
Q ss_pred CCeEEEEEcCCCCeEEEEECCCcEEEEECCCCe--eeEEec---CCCccEEEEEeeCC-----EEEEEeCC------CcE
Q 014934 209 DSVCSVGWANRNTHLAVGTSHGKVQIWDASRCK--RVRTME---GHRLRVGALAWSSS-----LLSSGSRD------KSI 272 (415)
Q Consensus 209 ~~V~~v~~sp~g~~la~g~~dg~V~iwd~~~~~--~~~~l~---~h~~~V~~l~~~~~-----~l~sgs~d------g~I 272 (415)
.....++|.|+|++ .++...|.|.+++ +++ .+..+. ........|+++++ .|+.+... +.|
T Consensus 31 ~~P~~ia~~pdG~l-~V~e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v 107 (352)
T 2ism_A 31 EVPWALAFLPDGGM-LIAERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQV 107 (352)
T ss_dssp SCEEEEEECTTSCE-EEEETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEEE
T ss_pred CCceEEEEcCCCeE-EEEeCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccEE
Confidence 46789999999985 4556779999998 343 222222 22456889999864 66555432 568
Q ss_pred EEEECCCCC-----ccEEEec---cccCCeEEEEEeCCCCEEEEEeC-------------CCcEEEEECCC---------
Q 014934 273 LQRDIRAQE-----DFVSKLS---GHKSEVCGLKWSYDNRELASGGN-------------DNRLFVWNQHS--------- 322 (415)
Q Consensus 273 ~iwd~~~~~-----~~~~~~~---~h~~~V~~l~~spdg~~lasg~~-------------dg~I~iwd~~~--------- 322 (415)
..++..... ..+..+. +.......|+|.|||.++++-+. .+.|.-+|...
T Consensus 108 ~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G~~~~~~~~~d~~~~~g~I~ri~~dG~~p~~npf~ 187 (352)
T 2ism_A 108 VRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTGEVYERELAQDLASLGGKILRLTPEGEPAPGNPFL 187 (352)
T ss_dssp EEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECCCTTCGGGGGCTTCSSSEEEEECTTSSBCTTCTTT
T ss_pred EEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEECCCCCCccccCCCCCceEEEEEcCCCCCCCCCccc
Confidence 888876431 1111122 11123468999999987776432 25666666543
Q ss_pred -----CceeEEeccCCCcEEEEEEcCCCCcEEEEEc
Q 014934 323 -----TQPVLKYCEHTAAVKAIAWSPHLHGLLASGG 353 (415)
Q Consensus 323 -----~~~~~~~~~h~~~V~~l~~sp~~~~llasgg 353 (415)
...+... +|. ....++|+|+...|+++-.
T Consensus 188 ~~~~~~~~i~a~-G~r-np~g~a~d~~~g~l~v~d~ 221 (352)
T 2ism_A 188 GRRGARPEVYSL-GHR-NPQGLAWHPKTGELFSSEH 221 (352)
T ss_dssp TCTTSCTTEEEE-CCS-EECCCEECTTTCCEEEEEE
T ss_pred CCCCCCccEEEE-cCC-CcccEEEECCCCCEEEEEc
Confidence 1112221 332 3577899994444776654
No 319
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=96.86 E-value=0.05 Score=49.95 Aligned_cols=185 Identities=15% Similarity=0.088 Sum_probs=100.9
Q ss_pred CcEEEEEc-C----CeEEEEECCCCCeEEeEecCCC-CCeEEEEEcCCCCeEEEEECC------CcEEEEECCCCeeeE-
Q 014934 178 HNVLAVGL-G----NCVYLWNACSSKVTKLCDLGID-DSVCSVGWANRNTHLAVGTSH------GKVQIWDASRCKRVR- 244 (415)
Q Consensus 178 ~~~la~~~-d----~~V~iwd~~~~~~~~~~~~~~~-~~V~~v~~sp~g~~la~g~~d------g~V~iwd~~~~~~~~- 244 (415)
+.++++|. + +.+.+||..+++...+..+... .....+.+ +++.++.|+.+ ..+.+||..+.+-..
T Consensus 56 ~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~ 133 (306)
T 3ii7_A 56 NVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTPRDSLAACAA--EGKIYTSGGSEVGNSALYLFECYDTRTESWHTK 133 (306)
T ss_dssp TEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSSCCBSCEEEEE--TTEEEEECCBBTTBSCCCCEEEEETTTTEEEEE
T ss_pred CEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCccccceeEEEE--CCEEEEECCCCCCCcEeeeEEEEeCCCCceEeC
Confidence 45555553 2 5799999999887666544322 12222222 67777887765 458999998765322
Q ss_pred -EecCCCccEEEEEeeCCEEEEEeC---------CCcEEEEECCCCCccEEEeccccCC--eEEEEEeCCCCEEEEEeCC
Q 014934 245 -TMEGHRLRVGALAWSSSLLSSGSR---------DKSILQRDIRAQEDFVSKLSGHKSE--VCGLKWSYDNRELASGGND 312 (415)
Q Consensus 245 -~l~~h~~~V~~l~~~~~~l~sgs~---------dg~I~iwd~~~~~~~~~~~~~h~~~--V~~l~~spdg~~lasg~~d 312 (415)
.+........++...+.+++.|+. -..+.+||+.+.. ...+...... -.++... ++++++.|+.+
T Consensus 134 ~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~--W~~~~~~p~~r~~~~~~~~-~~~i~v~GG~~ 210 (306)
T 3ii7_A 134 PSMLTQRCSHGMVEANGLIYVCGGSLGNNVSGRVLNSCEVYDPATET--WTELCPMIEARKNHGLVFV-KDKIFAVGGQN 210 (306)
T ss_dssp CCCSSCCBSCEEEEETTEEEEECCEESCTTTCEECCCEEEEETTTTE--EEEECCCSSCCBSCEEEEE-TTEEEEECCEE
T ss_pred CCCcCCcceeEEEEECCEEEEECCCCCCCCcccccceEEEeCCCCCe--EEECCCccchhhcceEEEE-CCEEEEEeCCC
Confidence 222222222334445666666653 3458899998764 2222211111 1122222 67777777654
Q ss_pred -----CcEEEEECCCCceeE--EeccCCCcEEEEEEcCCCCcEEEEEcCC---CCCeEEEEECCCCcE
Q 014934 313 -----NRLFVWNQHSTQPVL--KYCEHTAAVKAIAWSPHLHGLLASGGGT---ADRCIRFWNTTTNTH 370 (415)
Q Consensus 313 -----g~I~iwd~~~~~~~~--~~~~h~~~V~~l~~sp~~~~llasggg~---~d~~I~iwd~~t~~~ 370 (415)
+.+.+||+.+.+-.. .+........++.+ + ..+++.||.. .-..+.+||+.+.+-
T Consensus 211 ~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~-~~i~v~GG~~~~~~~~~~~~yd~~~~~W 275 (306)
T 3ii7_A 211 GLGGLDNVEYYDIKLNEWKMVSPMPWKGVTVKCAAV--G-SIVYVLAGFQGVGRLGHILEYNTETDKW 275 (306)
T ss_dssp TTEEBCCEEEEETTTTEEEECCCCSCCBSCCEEEEE--T-TEEEEEECBCSSSBCCEEEEEETTTTEE
T ss_pred CCCCCceEEEeeCCCCcEEECCCCCCCccceeEEEE--C-CEEEEEeCcCCCeeeeeEEEEcCCCCeE
Confidence 468999998764321 11111122233333 3 3477777521 125688899987653
No 320
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=96.85 E-value=0.24 Score=46.80 Aligned_cols=193 Identities=9% Similarity=0.106 Sum_probs=108.8
Q ss_pred CCeEEEEEcCCCCeEEEEECCCcEEEEECCCCe-eeEEec---CCCccEEEEEeeCC-----EEEEEeC----C----Cc
Q 014934 209 DSVCSVGWANRNTHLAVGTSHGKVQIWDASRCK-RVRTME---GHRLRVGALAWSSS-----LLSSGSR----D----KS 271 (415)
Q Consensus 209 ~~V~~v~~sp~g~~la~g~~dg~V~iwd~~~~~-~~~~l~---~h~~~V~~l~~~~~-----~l~sgs~----d----g~ 271 (415)
.....++|.|+|+ |.++..+|.|.++|. +++ .+..+. ........|+++++ .|+.+.. + +.
T Consensus 29 ~~P~~ia~~pdG~-l~V~e~~g~I~~~d~-~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~~ 106 (354)
T 3a9g_A 29 EVPWSIAPLGGGR-YLVTERPGRLVLISP-SGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRNR 106 (354)
T ss_dssp SCEEEEEEEETTE-EEEEETTTEEEEECS-SCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEEE
T ss_pred CCCeEEEEcCCCe-EEEEeCCCEEEEEeC-CCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcceE
Confidence 4678999999998 555577799999973 444 222221 22356889999863 5655443 3 56
Q ss_pred EEEEECCCCC------ccE-EEec-cccCCeEEEEEeCCCCEEEEEeC-------------CCcEEEEECCCC-------
Q 014934 272 ILQRDIRAQE------DFV-SKLS-GHKSEVCGLKWSYDNRELASGGN-------------DNRLFVWNQHST------- 323 (415)
Q Consensus 272 I~iwd~~~~~------~~~-~~~~-~h~~~V~~l~~spdg~~lasg~~-------------dg~I~iwd~~~~------- 323 (415)
|..++..... +.+ ..+. ........|+|.|||.++++-+. .|.|.-++....
T Consensus 107 v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~dG~~p~~npf 186 (354)
T 3a9g_A 107 VIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTGDAADPRLAQDLSSLAGKILRVDEEGRPPADNPF 186 (354)
T ss_dssp EEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECCCTTCGGGGTCTTCCSSEEEEECTTSCCCTTSSS
T ss_pred EEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEECCCCCCccccCCCCCCeEEEEEcCCCCCCCCCCC
Confidence 7778766441 111 1121 11123467999999987777432 245666665432
Q ss_pred --ceeEEeccCCCcEEEEEEcCCCCcEEEEEcCCCCC--eEEEEECCCCc------------------EEEEe-eCCCCE
Q 014934 324 --QPVLKYCEHTAAVKAIAWSPHLHGLLASGGGTADR--CIRFWNTTTNT------------------HLSCM-DTGSQV 380 (415)
Q Consensus 324 --~~~~~~~~h~~~V~~l~~sp~~~~llasggg~~d~--~I~iwd~~t~~------------------~~~~~-~~~~~V 380 (415)
..+... +|. ....++|+|+...|+++-.| .++ .|.+. ..|. .+..+ ......
T Consensus 187 ~~~~i~a~-G~r-np~Gla~d~~~g~l~v~d~g-~~~~dei~~i--~~G~nyGwp~~~g~~~~~~~~~p~~~~~~~~~ap 261 (354)
T 3a9g_A 187 PNSPIWSY-GHR-NPQGIDWHRASGVMVATEHG-PVGHDEVNII--LKGGNYGWPLATGKAGRGEFVDPVIDTGSETWAP 261 (354)
T ss_dssp TTCCEEEE-CCS-CCCEEEECTTTCCEEEEECC-SSSCCEEEEE--CTTCBCCTTTCCSCCCCTTSCCCSEECTTCCCCE
T ss_pred CCCcEEEE-ccC-CcceEEEeCCCCCEEEEecC-CCCCcEEEEe--cCCCcCCCCcccCCCCCCCCcCCEeecCCCCcCC
Confidence 122222 443 34689999944447776543 222 23332 2221 22233 224457
Q ss_pred EEEEEC-------CCCCeEEEEEecCCCcEEEEECCC
Q 014934 381 CNLVWS-------KNVNELVSTHGYSQNQIIVWRYPT 410 (415)
Q Consensus 381 ~~l~~s-------~~~~~l~s~~g~~dg~I~vw~~~s 410 (415)
..+.|. .+|..+++ ....+.|...++..
T Consensus 262 ~G~~~y~g~~fp~~~G~l~v~--~~~~~~v~~~~~~~ 296 (354)
T 3a9g_A 262 SGASFVHGDMFPGLRGWLLIA--CLRGSMLAAVNFGD 296 (354)
T ss_dssp EEEEECCSSSCGGGTTEEEEE--ETTTTEEEEEEECG
T ss_pred cceEEECCCCCcccCCcEEEE--EcCCCEEEEEEECC
Confidence 788883 46666655 45566777777653
No 321
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=96.81 E-value=0.63 Score=48.55 Aligned_cols=213 Identities=13% Similarity=0.106 Sum_probs=128.8
Q ss_pred ceeEeecCCCcEEEEEcCCeEEEEECCCCCeEEeEecCCCCCeEEEEEcCCCCeEEEEECCCcEEEEECCCCeeeEEec-
Q 014934 169 YLNLVDWSSHNVLAVGLGNCVYLWNACSSKVTKLCDLGIDDSVCSVGWANRNTHLAVGTSHGKVQIWDASRCKRVRTME- 247 (415)
Q Consensus 169 ~i~~l~ws~~~~la~~~d~~V~iwd~~~~~~~~~~~~~~~~~V~~v~~sp~g~~la~g~~dg~V~iwd~~~~~~~~~l~- 247 (415)
.|.++.-..+..|-++.++.++.||..+.+...... .....|.++.. .+| .|.+|+.+ -|..+|..+++.. .+.
T Consensus 64 ~i~~i~~d~~g~lWigT~~Gl~~yd~~~~~f~~~~~-~~~~~i~~i~~-~~g-~lWigt~~-Gl~~~~~~~~~~~-~~~~ 138 (758)
T 3ott_A 64 RIYCGVIIDNTYLYMGTDNGILVYNYRADRYEQPET-DFPTDVRTMAL-QGD-TLWLGALN-GLYTYQLQSRKLT-SFDT 138 (758)
T ss_dssp CEEEEEEETTTEEEEEETTEEEEEETTTTEECCCSC-CCCSCEEEEEE-ETT-EEEEEETT-EEEEEETTTCCEE-EECH
T ss_pred eEEEEEEcCCCcEEEEeCCCeEEEeCCCCEEECccc-CCCceEEEEEe-cCC-cEEEEcCC-cceeEeCCCCeEE-Eecc
Confidence 466666556555666667779999998765433111 12345777754 344 57777777 5888998765533 231
Q ss_pred ----CCCccEEEEEee-CCEEEEEeCCCcEEEEECCCCCccEEEecc------ccCCeEEEEEeCCCCEEEEEeCCCcEE
Q 014934 248 ----GHRLRVGALAWS-SSLLSSGSRDKSILQRDIRAQEDFVSKLSG------HKSEVCGLKWSYDNRELASGGNDNRLF 316 (415)
Q Consensus 248 ----~h~~~V~~l~~~-~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~------h~~~V~~l~~spdg~~lasg~~dg~I~ 316 (415)
.....|.++... ...|..|+.+| |..+|..... ...+.. ....|.++....++..|..|.. +-|.
T Consensus 139 ~~~~l~~~~i~~i~~d~~g~lWigt~~G-l~~~~~~~~~--~~~~~~~~~~~~~~~~i~~i~~d~~~~~lWigt~-~Gl~ 214 (758)
T 3ott_A 139 RRNGLPNNTIYSIIRTKDNQIYVGTYNG-LCRYIPSNGK--FEGIPLPVHSSQSNLFVNSLLEDTTRQCVWIGTE-GYLF 214 (758)
T ss_dssp HHHCCSCSCEEEEEECTTCCEEEEETTE-EEEEETTTTE--EEEECCCCCTTCSSCCEEEEEEETTTTEEEEEEE-EEEE
T ss_pred CCCCcCCCeEEEEEEcCCCCEEEEeCCC-HhhCccCCCc--eEEecCCCccccccceeEEEEEECCCCEEEEEEC-CCCe
Confidence 123468888776 45666677654 7788876654 222211 1224888888877776555554 4588
Q ss_pred EEECCCCceeEEeccCCCcEEEEEEcCCCCcEEEEEcCCCCCeEEEEECCCCcEEEEee--------CCCCEEEEEECCC
Q 014934 317 VWNQHSTQPVLKYCEHTAAVKAIAWSPHLHGLLASGGGTADRCIRFWNTTTNTHLSCMD--------TGSQVCNLVWSKN 388 (415)
Q Consensus 317 iwd~~~~~~~~~~~~h~~~V~~l~~sp~~~~llasggg~~d~~I~iwd~~t~~~~~~~~--------~~~~V~~l~~s~~ 388 (415)
.+|..+++...........|.++....+|. +.+.. ++-+.+++..+++...... ....|.++....+
T Consensus 215 ~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~-lWigT----~~Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~ 289 (758)
T 3ott_A 215 QYFPSTGQIKQTEAFHNNSIKSLALDGNGD-LLAGT----DNGLYVYHNDTTPLQHIIHDSRNIQSLTNNIIWNIFADQE 289 (758)
T ss_dssp EEETTTTEEEEEEEEEEEEEEEEEECTTCC-EEEEE----TTEEEEECCTTSCCEEECCCTTCTTSCSCSCEEEEEECTT
T ss_pred EEcCCCCeEEeccCCCCCeEEEEEEcCCCC-EEEEe----CCceeEEecCCCcEEEEEcCCCCcCcCCcCeEEEEEEcCC
Confidence 899877643221111234588888887776 54422 3458888887765432211 1245889988888
Q ss_pred CCeEEEE
Q 014934 389 VNELVST 395 (415)
Q Consensus 389 ~~~l~s~ 395 (415)
|...+.+
T Consensus 290 g~lWiGT 296 (758)
T 3ott_A 290 HNIWLGT 296 (758)
T ss_dssp CCEEEEE
T ss_pred CCEEEEe
Confidence 8876653
No 322
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=96.76 E-value=0.069 Score=58.91 Aligned_cols=233 Identities=9% Similarity=0.064 Sum_probs=142.1
Q ss_pred EeecCCCcEEEEEc----CCeEEEEECCCCCeEEeEecCCCCCeEEEEEcCCCCeEEEEECCCcEEEEECCCCeeeEEec
Q 014934 172 LVDWSSHNVLAVGL----GNCVYLWNACSSKVTKLCDLGIDDSVCSVGWANRNTHLAVGTSHGKVQIWDASRCKRVRTME 247 (415)
Q Consensus 172 ~l~ws~~~~la~~~----d~~V~iwd~~~~~~~~~~~~~~~~~V~~v~~sp~g~~la~g~~dg~V~iwd~~~~~~~~~l~ 247 (415)
.+.+.+++++++-. +..|.|.|+..+......... .-+.-.+|..+.||.-. ..+++|+|+++...+..+.
T Consensus 29 ~~T~eSDkyicvre~~~~~~~vvIidl~~~~~~~rrpi~----AdsAIMnP~~~iiALra-g~~lQiFnl~~k~klks~~ 103 (1630)
T 1xi4_A 29 TLTMESDKFICIREKVGEQAQVVIIDMNDPSNPIRRPIS----ADSAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHT 103 (1630)
T ss_pred ceeeecCceEEEEecCCCCceEEEEECCCCCCccccccc----chhhccCCCcceEEEec-CCeEEEeehHHhhhhcccc
Confidence 33444455665542 347888888876543222211 22344578777777654 6789999999877776665
Q ss_pred CCCccEEEEEee-CCEEEEEeCCCcEEEEECCCCCccEEEeccc----cCCeEEEEEeCCCCEEEEEe-------CCCcE
Q 014934 248 GHRLRVGALAWS-SSLLSSGSRDKSILQRDIRAQEDFVSKLSGH----KSEVCGLKWSYDNRELASGG-------NDNRL 315 (415)
Q Consensus 248 ~h~~~V~~l~~~-~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h----~~~V~~l~~spdg~~lasg~-------~dg~I 315 (415)
- ...|.--.|- ++.|+-.+ +..|+.|++.....++..+..| ...|..-..+++.++++..| -.|.+
T Consensus 104 ~-~e~VvfWkWis~~~l~lVT-~~aVyHW~~~~~s~P~k~fdR~~~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~m 181 (1630)
T 1xi4_A 104 M-TDDVTFWKWISLNTVALVT-DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAM 181 (1630)
T ss_pred c-CCCceEEEecCCCeeEEEc-CCeEEEeccCCCCccHHHHhcchhcccCeeEEeeeCCCCCeEEEEeeccCCCccccee
Confidence 3 4467777775 56666554 5679999997655455555555 45677788889999987644 34778
Q ss_pred EEEECCCCceeEEeccCCCcEEEEEEc--CCCCcEEEEEcC-CCCCeEEEEECCCC---c-EE--EEee-------CCCC
Q 014934 316 FVWNQHSTQPVLKYCEHTAAVKAIAWS--PHLHGLLASGGG-TADRCIRFWNTTTN---T-HL--SCMD-------TGSQ 379 (415)
Q Consensus 316 ~iwd~~~~~~~~~~~~h~~~V~~l~~s--p~~~~llasggg-~~d~~I~iwd~~t~---~-~~--~~~~-------~~~~ 379 (415)
.+|....+ ..+.+++|.+....+... +....+++-+.. ...+.++|-++... . .. ..++ ....
T Consensus 182 QLyS~er~-~sQ~iegha~~F~~~~~~~~~~~~~l~~f~~~~~~g~kLhi~Ei~~~~~~~~~f~kk~~~~~~~~~~~~Df 260 (1630)
T 1xi4_A 182 QLYSVDRK-VSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDF 260 (1630)
T ss_pred eeeecccc-cchhhhHhHhhhheeccCCCCCCceEEEEEEecCCCceEEEEecCCCccCCCCCccccccccCCcccccCc
Confidence 88887654 334566777655444432 222234443321 02367888887442 1 11 1111 1223
Q ss_pred EEEEEECCCCCeEEEEEecCCCcEEEEECCCCccc
Q 014934 380 VCNLVWSKNVNELVSTHGYSQNQIIVWRYPTMSKV 414 (415)
Q Consensus 380 V~~l~~s~~~~~l~s~~g~~dg~I~vw~~~s~~~l 414 (415)
...+..++....+.. -+.-|-|+++|+.++..+
T Consensus 261 pv~~~vs~k~g~iy~--itk~G~~~~~d~~t~~~i 293 (1630)
T 1xi4_A 261 PVAMQISEKHDVVFL--ITKYGYIHLYDLETGTCI 293 (1630)
T ss_pred ceEEEeccccCEEEE--EecCceEEEEecccchhh
Confidence 445677776666555 347889999999998764
No 323
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=96.70 E-value=0.04 Score=50.95 Aligned_cols=172 Identities=14% Similarity=0.082 Sum_probs=92.0
Q ss_pred EEEEECCCCCeEEeEecCCC-CCeEEEEEcCCCCeEEEEECC--------CcEEEEECCCCe--eeEEecCCCccEEEEE
Q 014934 189 VYLWNACSSKVTKLCDLGID-DSVCSVGWANRNTHLAVGTSH--------GKVQIWDASRCK--RVRTMEGHRLRVGALA 257 (415)
Q Consensus 189 V~iwd~~~~~~~~~~~~~~~-~~V~~v~~sp~g~~la~g~~d--------g~V~iwd~~~~~--~~~~l~~h~~~V~~l~ 257 (415)
++.||..+++...+...... .....+.+ ++..++.|+.+ ..+.+||..+.+ .+..+........++.
T Consensus 69 ~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~ 146 (315)
T 4asc_A 69 FLQFDHLDSEWLGMPPLPSPRCLFGLGEA--LNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGHTVLS 146 (315)
T ss_dssp EEEEETTTTEEEECCCBSSCEESCEEEEE--TTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEE
T ss_pred eEEecCCCCeEEECCCCCcchhceeEEEE--CCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccceeEEE
Confidence 88999998877655433221 11122222 66777777632 458999998764 2222222222233444
Q ss_pred eeCCEEEEEeC-C-----CcEEEEECCCCCccEEEeccccCC--eEEEEEeCCCCEEEEEeCCC-----cEEEEECCCCc
Q 014934 258 WSSSLLSSGSR-D-----KSILQRDIRAQEDFVSKLSGHKSE--VCGLKWSYDNRELASGGNDN-----RLFVWNQHSTQ 324 (415)
Q Consensus 258 ~~~~~l~sgs~-d-----g~I~iwd~~~~~~~~~~~~~h~~~--V~~l~~spdg~~lasg~~dg-----~I~iwd~~~~~ 324 (415)
..+.+++.|+. + ..+.+||+.+.. ...+.....+ -.+++. -++++++.|+.++ .+.+||+.+.+
T Consensus 147 ~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~--W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~yd~~~~~ 223 (315)
T 4asc_A 147 HMDLVYVIGGKGSDRKCLNKMCVYDPKKFE--WKELAPMQTARSLFGATV-HDGRIIVAAGVTDTGLTSSAEVYSITDNK 223 (315)
T ss_dssp ETTEEEEECCBCTTSCBCCCEEEEETTTTE--EEECCCCSSCCBSCEEEE-ETTEEEEEEEECSSSEEEEEEEEETTTTE
T ss_pred ECCEEEEEeCCCCCCcccceEEEEeCCCCe--EEECCCCCCchhceEEEE-ECCEEEEEeccCCCCccceEEEEECCCCe
Confidence 55677777776 2 468999988764 2222211111 111222 2677888887654 58899998764
Q ss_pred eeEEec--cCCCcEEEEEEcCCCCcEEEEEcCCCC--------------CeEEEEECCCCcE
Q 014934 325 PVLKYC--EHTAAVKAIAWSPHLHGLLASGGGTAD--------------RCIRFWNTTTNTH 370 (415)
Q Consensus 325 ~~~~~~--~h~~~V~~l~~sp~~~~llasggg~~d--------------~~I~iwd~~t~~~ 370 (415)
-...-. ........+.+ ++ .+++.|| .+ ..|.+||+.+.+-
T Consensus 224 W~~~~~~p~~r~~~~~~~~--~~-~l~v~GG--~~~~~~~~~~~~~~~~~~v~~yd~~~~~W 280 (315)
T 4asc_A 224 WAPFEAFPQERSSLSLVSL--VG-TLYAIGG--FATLETESGELVPTELNDIWRYNEEEKKW 280 (315)
T ss_dssp EEEECCCSSCCBSCEEEEE--TT-EEEEEEE--EEEEECTTSCEEEEEEEEEEEEETTTTEE
T ss_pred EEECCCCCCcccceeEEEE--CC-EEEEECC--ccccCcCCccccccccCcEEEecCCCChh
Confidence 332211 11111222222 33 4777775 32 3467888877654
No 324
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=96.70 E-value=0.04 Score=50.78 Aligned_cols=175 Identities=17% Similarity=0.165 Sum_probs=94.4
Q ss_pred CeEEEEECCCCCeEEeEecCC-CCCeEEEEEcCCCCeEEEEECC-----CcEEEEECCCCeee--EEecCCCccEEEEEe
Q 014934 187 NCVYLWNACSSKVTKLCDLGI-DDSVCSVGWANRNTHLAVGTSH-----GKVQIWDASRCKRV--RTMEGHRLRVGALAW 258 (415)
Q Consensus 187 ~~V~iwd~~~~~~~~~~~~~~-~~~V~~v~~sp~g~~la~g~~d-----g~V~iwd~~~~~~~--~~l~~h~~~V~~l~~ 258 (415)
+.+++||..+.+...+..+.. .....++.+ +++.++.|+.+ ..+.+||..+.+-. ..+........++.+
T Consensus 90 ~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~ 167 (308)
T 1zgk_A 90 SALDCYNPMTNQWSPCAPMSVPRNRIGVGVI--DGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVL 167 (308)
T ss_dssp CCEEEEETTTTEEEECCCCSSCCBTCEEEEE--TTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEE
T ss_pred ceEEEECCCCCeEeECCCCCcCccccEEEEE--CCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCccccceEEEEE
Confidence 468999999887666544322 122222322 67777777643 36889998876422 222222222333444
Q ss_pred eCCEEEEEeCC-----CcEEEEECCCCCccEEEecc---ccCCeEEEEEeCCCCEEEEEeCC-----CcEEEEECCCCce
Q 014934 259 SSSLLSSGSRD-----KSILQRDIRAQEDFVSKLSG---HKSEVCGLKWSYDNRELASGGND-----NRLFVWNQHSTQP 325 (415)
Q Consensus 259 ~~~~l~sgs~d-----g~I~iwd~~~~~~~~~~~~~---h~~~V~~l~~spdg~~lasg~~d-----g~I~iwd~~~~~~ 325 (415)
.+.+++.|+.+ ..+.+||+.+.. ...+.. ....-..+.+ ++++++.|+.+ +.+.+||+.+.+-
T Consensus 168 ~~~iyv~GG~~~~~~~~~~~~yd~~~~~--W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W 243 (308)
T 1zgk_A 168 NRLLYAVGGFDGTNRLNSAECYYPERNE--WRMITAMNTIRSGAGVCVL--HNCIYAAGGYDGQDQLNSVERYDVETETW 243 (308)
T ss_dssp TTEEEEECCBCSSCBCCCEEEEETTTTE--EEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTTTEE
T ss_pred CCEEEEEeCCCCCCcCceEEEEeCCCCe--EeeCCCCCCccccceEEEE--CCEEEEEeCCCCCCccceEEEEeCCCCcE
Confidence 56677777654 458899987664 222211 1111122222 67777888764 5699999987643
Q ss_pred eEE--eccCCCcEEEEEEcCCCCcEEEEEcCC---CCCeEEEEECCCCcE
Q 014934 326 VLK--YCEHTAAVKAIAWSPHLHGLLASGGGT---ADRCIRFWNTTTNTH 370 (415)
Q Consensus 326 ~~~--~~~h~~~V~~l~~sp~~~~llasggg~---~d~~I~iwd~~t~~~ 370 (415)
... +.........+.+ + ..+++.||.. .-..+.+||+.+.+-
T Consensus 244 ~~~~~~p~~r~~~~~~~~--~-~~i~v~GG~~~~~~~~~v~~yd~~~~~W 290 (308)
T 1zgk_A 244 TFVAPMKHRRSALGITVH--Q-GRIYVLGGYDGHTFLDSVECYDPDTDTW 290 (308)
T ss_dssp EECCCCSSCCBSCEEEEE--T-TEEEEECCBCSSCBCCEEEEEETTTTEE
T ss_pred EECCCCCCCccceEEEEE--C-CEEEEEcCcCCCcccceEEEEcCCCCEE
Confidence 221 1111111122222 3 3477777511 124578888887653
No 325
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=96.68 E-value=1.1 Score=49.38 Aligned_cols=219 Identities=7% Similarity=0.048 Sum_probs=123.9
Q ss_pred ceeEeecCCCcEEEEEcCCeEEEEECCCCCeEEeEecCCCCCeEEEEEcCC------CCeEEEEEC-CCcEEEEECCCCe
Q 014934 169 YLNLVDWSSHNVLAVGLGNCVYLWNACSSKVTKLCDLGIDDSVCSVGWANR------NTHLAVGTS-HGKVQIWDASRCK 241 (415)
Q Consensus 169 ~i~~l~ws~~~~la~~~d~~V~iwd~~~~~~~~~~~~~~~~~V~~v~~sp~------g~~la~g~~-dg~V~iwd~~~~~ 241 (415)
.|...+-+.. .++++.++.+.++.+..+++.......-...|.|+++.+. ++++|+|.. |++|+|+++.+.+
T Consensus 515 ~I~~As~n~~-~vvva~g~~l~~fel~~~~L~~~~~~~l~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~sL~~l~ 593 (1158)
T 3ei3_A 515 NISVASCNSS-QVVVAVGRALYYLQIHPQELRQISHTEMEHEVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFE 593 (1158)
T ss_dssp CCCEEEECSS-EEEEEETTEEEEEEEETTEEEEEEEEECSSCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEEETTTCC
T ss_pred EEEEEEeCCC-EEEEEECCEEEEEEeeCCceeeecccCCCCceEEEEeecCCCCcccccEEEEEECCCCEEEEEECCCCC
Confidence 3444444433 3444457788888777665544333334568999999863 469999996 9999999998766
Q ss_pred eeEEecC-CCccEEEEEee----CCEEEEEeCCCcEEEEECCC--CCcc--EEEeccccCCeEEEEEeCCCCEEEEEeCC
Q 014934 242 RVRTMEG-HRLRVGALAWS----SSLLSSGSRDKSILQRDIRA--QEDF--VSKLSGHKSEVCGLKWSYDNRELASGGND 312 (415)
Q Consensus 242 ~~~~l~~-h~~~V~~l~~~----~~~l~sgs~dg~I~iwd~~~--~~~~--~~~~~~h~~~V~~l~~spdg~~lasg~~d 312 (415)
.+....- ......++... .-+|..|-.||.+..+.+.. +.-. .....| ..++.=..+...|..-+.+..+
T Consensus 594 ~~~~~~L~~~~~p~si~l~~~~~~~~L~igl~dG~l~~~~~d~~tg~l~d~r~~~LG-~~pv~L~~~~~~~~~~V~a~s~ 672 (1158)
T 3ei3_A 594 LLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYFGLNIETGLLSDRKKVTLG-TQPTVLRTFRSLSTTNVFACSD 672 (1158)
T ss_dssp EEEEEECCSSCCEEEEEEEEETTEEEEEEEETTSEEEEEEECTTTCCEEEEEEEECC-SSCCEEEEEESSSCEEEEEESS
T ss_pred eEEEEECCCCCCCcEEEEEEeCCCcEEEEEeCCCeEEEEEEcCCCCccccceeEEcC-CCceEEEEEeeCCceeEEEECC
Confidence 5543321 11234444443 24788999999987666543 2211 112233 3455544454444443333345
Q ss_pred CcEEEEECCCCceeEEeccCCCcEEEEEEcCCC--CcEEEEEcCCCCCeEEEEECCCCc--EEEEeeCCCCEEEEEECCC
Q 014934 313 NRLFVWNQHSTQPVLKYCEHTAAVKAIAWSPHL--HGLLASGGGTADRCIRFWNTTTNT--HLSCMDTGSQVCNLVWSKN 388 (415)
Q Consensus 313 g~I~iwd~~~~~~~~~~~~h~~~V~~l~~sp~~--~~llasggg~~d~~I~iwd~~t~~--~~~~~~~~~~V~~l~~s~~ 388 (415)
....+|--+ ++....--.-..--....|+..+ ..++++. ++.++|..+..-. .+..+.-+..+..++++|.
T Consensus 673 rp~liy~~~-~~l~~s~l~~~~v~~~~~F~se~~~~g~v~~~----~~~LrI~~i~~~~~~~~~~ipL~~Tprri~y~~~ 747 (1158)
T 3ei3_A 673 RPTVIYSSN-HKLVFSNVNLKEVNYMCPLNSDGYPDSLALAN----NSTLTIGTIDEIQKLHIRTVPLYESPRKICYQEV 747 (1158)
T ss_dssp SCEEEEESS-SSEEEEEBSSSCCCEEEEECCSSSTTEEEEEC----SSCEEEEEECCSSSEEEEEEECSSEEEEEEEEGG
T ss_pred CCEEEEEcC-CceEEeccChHHhceEeccCcccCCCcEEEEc----CCceEEEEecccCCeeEEEEeCCCCceEEEEcCC
Confidence 555555433 33222111111112344564322 2344433 4568888775432 3455667788899999998
Q ss_pred CCeEEE
Q 014934 389 VNELVS 394 (415)
Q Consensus 389 ~~~l~s 394 (415)
.+.++.
T Consensus 748 ~~~~~v 753 (1158)
T 3ei3_A 748 SQCFGV 753 (1158)
T ss_dssp GTEEEE
T ss_pred CCEEEE
Confidence 876655
No 326
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=96.39 E-value=0.1 Score=48.94 Aligned_cols=140 Identities=12% Similarity=0.066 Sum_probs=76.6
Q ss_pred CCcEEEEEc--CCeEEEEECCC--CCeEEeEecC-C-CCCeEEEEEcCCCCeEEEEEC-C---------CcEEEEECCCC
Q 014934 177 SHNVLAVGL--GNCVYLWNACS--SKVTKLCDLG-I-DDSVCSVGWANRNTHLAVGTS-H---------GKVQIWDASRC 240 (415)
Q Consensus 177 ~~~~la~~~--d~~V~iwd~~~--~~~~~~~~~~-~-~~~V~~v~~sp~g~~la~g~~-d---------g~V~iwd~~~~ 240 (415)
.+.++++|. .+.+++||..+ .+...+..+. . ...-.++.+ ++++++.|+. + ..+.+||+.+.
T Consensus 19 ~~~iyv~GG~~~~~~~~~d~~~~~~~W~~~~~~p~~~R~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~ 96 (357)
T 2uvk_A 19 NDTVYIGLGSAGTAWYKLDTQAKDKKWTALAAFPGGPRDQATSAFI--DGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTN 96 (357)
T ss_dssp TTEEEEECGGGTTCEEEEETTSSSCCEEECCCCTTCCCBSCEEEEE--TTEEEEECCEEECTTSCEEECCCEEEEETTTT
T ss_pred CCEEEEEeCcCCCeEEEEccccCCCCeeECCCCCCCcCccceEEEE--CCEEEEEcCCCCCCCccceeeccEEEEeCCCC
Confidence 345555552 46899999974 5555554333 1 112222222 5777777765 2 46899999876
Q ss_pred ee--eEEec-CCCccEEEEEeeCCEEEEEeCC---------------------------------------CcEEEEECC
Q 014934 241 KR--VRTME-GHRLRVGALAWSSSLLSSGSRD---------------------------------------KSILQRDIR 278 (415)
Q Consensus 241 ~~--~~~l~-~h~~~V~~l~~~~~~l~sgs~d---------------------------------------g~I~iwd~~ 278 (415)
+- +..+. .......++...+.+++.|+.+ ..+.+||+.
T Consensus 97 ~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~~ 176 (357)
T 2uvk_A 97 SWVKLMSHAPMGMAGHVTFVHNGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAHYFDKKAEDYFFNKFLLSFDPS 176 (357)
T ss_dssp EEEECSCCCSSCCSSEEEEEETTEEEEEECCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHSSCGGGGCCCCEEEEEETT
T ss_pred cEEECCCCCCcccccceEEEECCEEEEEeCcCCCcCcccccchhhcCCcccchhhhhhhhccccccccCCcccEEEEeCC
Confidence 42 22222 2222334445567788888765 578999998
Q ss_pred CCCcc-EEEeccccCCe-EEEEEeCCCCEEEEEeC------CCcEEEEEC
Q 014934 279 AQEDF-VSKLSGHKSEV-CGLKWSYDNRELASGGN------DNRLFVWNQ 320 (415)
Q Consensus 279 ~~~~~-~~~~~~h~~~V-~~l~~spdg~~lasg~~------dg~I~iwd~ 320 (415)
+..-. +..+. ....- .+++.. ++++++.|+. ...+.+||+
T Consensus 177 ~~~W~~~~~~p-~~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~v~~~d~ 224 (357)
T 2uvk_A 177 TQQWSYAGESP-WYGTAGAAVVNK-GDKTWLINGEAKPGLRTDAVFELDF 224 (357)
T ss_dssp TTEEEEEEECS-SCCCBSCEEEEE-TTEEEEECCEEETTEECCCEEEEEC
T ss_pred CCcEEECCCCC-CCCcccccEEEE-CCEEEEEeeecCCCcccCceEEEEe
Confidence 76511 11111 11111 223332 5667777764 345788887
No 327
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=96.34 E-value=0.058 Score=50.74 Aligned_cols=199 Identities=8% Similarity=-0.038 Sum_probs=106.3
Q ss_pred cCC-CcEEEEEcCCeEEEEECCCCCeEEeEecCCCCCeEEEEEc--C-CCCeEEEE-ECCCcEEEEECCCCeeeEEecC-
Q 014934 175 WSS-HNVLAVGLGNCVYLWNACSSKVTKLCDLGIDDSVCSVGWA--N-RNTHLAVG-TSHGKVQIWDASRCKRVRTMEG- 248 (415)
Q Consensus 175 ws~-~~~la~~~d~~V~iwd~~~~~~~~~~~~~~~~~V~~v~~s--p-~g~~la~g-~~dg~V~iwd~~~~~~~~~l~~- 248 (415)
|.- +.+++.+.||.|+-+|..+|+..-.+......++....-. + ++..+++. +.||.|..++..++.....+..
T Consensus 7 ~~~~~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~ 86 (339)
T 2be1_A 7 LSLSDILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIR 86 (339)
T ss_dssp SEEEEEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHH
T ss_pred ceeCCEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeeccc
Confidence 444 3455555799999999999998777654311222221100 1 23333333 5899999999988754433321
Q ss_pred ---CCccEEE---EEe-------eCCEEEEEeCCCcEEEEECCCCCccEEEecccc-CC------eEEEEEe-----CCC
Q 014934 249 ---HRLRVGA---LAW-------SSSLLSSGSRDKSILQRDIRAQEDFVSKLSGHK-SE------VCGLKWS-----YDN 303 (415)
Q Consensus 249 ---h~~~V~~---l~~-------~~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~-~~------V~~l~~s-----pdg 303 (415)
...++.. ... .+..+++|+.+|.+...|.++++. +..+.... .. ..|.... ..+
T Consensus 87 ~lv~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~-~W~~~~~~~~~~~~~~~e~~~~~~d~~~d~~~ 165 (339)
T 2be1_A 87 QLVSTSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEI-ISAFGPGSKNGYFGSQSVDCSPEEKIKLQECE 165 (339)
T ss_dssp HHHTTCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCE-EEEESTTCBCC--------------------C
T ss_pred cceeccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcE-EEEEecCCCcccccccccccccccccccccCC
Confidence 1222221 011 367889999999999999999983 44443211 00 1111111 124
Q ss_pred CEEEEEeCCCcEEEEECCCCceeEEec-----cCCCc--EE-EEEEcCCCCcEEEEEcCCCCCeEEEEECCCCcEEE-Ee
Q 014934 304 RELASGGNDNRLFVWNQHSTQPVLKYC-----EHTAA--VK-AIAWSPHLHGLLASGGGTADRCIRFWNTTTNTHLS-CM 374 (415)
Q Consensus 304 ~~lasg~~dg~I~iwd~~~~~~~~~~~-----~h~~~--V~-~l~~sp~~~~llasggg~~d~~I~iwd~~t~~~~~-~~ 374 (415)
..|+.|..+..+.+.+ ++++ +..++ .+... +. .-..+.++.. +++. .|+.|.-+|..+|+.+. ..
T Consensus 166 ~~v~ig~~~y~v~~~~-~sG~-~W~~~~s~~~~~~~~~~~~~~~~~s~Dg~~-~~~~---~dg~v~A~d~~~G~~~W~~~ 239 (339)
T 2be1_A 166 NMIVIGKTIFELGIHS-YDGA-SYNVTYSTWQQNVLDVPLALQNTFSKDGMC-IAPF---RDKSLLASDLDFRIARWVSP 239 (339)
T ss_dssp CEEEEEEEEEECEECC-TTSC-CCCCEEEEEECCTTTHHHHTTCSSCSSSCC-EEEE---TTTEEEEECSTTCCEEEECC
T ss_pred CeEEEecceEEEEEEC-CCCC-eEEEecccccccccccccccccccccCCcE-EEEC---CCCEEEEEECCCCcEEEEee
Confidence 5677777777777766 4443 22211 11000 00 0000123443 4433 68899999988888776 44
Q ss_pred eCCCCE
Q 014934 375 DTGSQV 380 (415)
Q Consensus 375 ~~~~~V 380 (415)
+..+++
T Consensus 240 ~l~sPv 245 (339)
T 2be1_A 240 TFPGII 245 (339)
T ss_dssp CCSSCE
T ss_pred cCCCCe
Confidence 444443
No 328
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=96.33 E-value=0.72 Score=43.44 Aligned_cols=221 Identities=14% Similarity=0.065 Sum_probs=121.5
Q ss_pred ceeEeecCC-CcEEEEEcCCeEEEEECCCCCeEEeEec----CCCCCeEEEEEcCC---CCeEEEEEC----C----CcE
Q 014934 169 YLNLVDWSS-HNVLAVGLGNCVYLWNACSSKVTKLCDL----GIDDSVCSVGWANR---NTHLAVGTS----H----GKV 232 (415)
Q Consensus 169 ~i~~l~ws~-~~~la~~~d~~V~iwd~~~~~~~~~~~~----~~~~~V~~v~~sp~---g~~la~g~~----d----g~V 232 (415)
....++|.| ++++++-.++.|++++ .+++ ..+..+ ........|+++|+ +..|.++.. + +.|
T Consensus 30 ~P~~ia~~pdG~l~V~e~~g~I~~~d-~~G~-~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~~v 107 (354)
T 3a9g_A 30 VPWSIAPLGGGRYLVTERPGRLVLIS-PSGK-KLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRNRV 107 (354)
T ss_dssp CEEEEEEEETTEEEEEETTTEEEEEC-SSCE-EEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEEEE
T ss_pred CCeEEEEcCCCeEEEEeCCCEEEEEe-CCCc-eEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcceEE
Confidence 356788988 6666666779999997 3454 223221 12356899999997 555555443 2 567
Q ss_pred EEEECCCC-------eee-EEecC-CCccEEEEEee--CCEEEEEeC-------------CCcEEEEECCCCC-------
Q 014934 233 QIWDASRC-------KRV-RTMEG-HRLRVGALAWS--SSLLSSGSR-------------DKSILQRDIRAQE------- 281 (415)
Q Consensus 233 ~iwd~~~~-------~~~-~~l~~-h~~~V~~l~~~--~~~l~sgs~-------------dg~I~iwd~~~~~------- 281 (415)
..|+.... +.+ ..+.. .......|+|. +.++++.+. .|.|..+|....-
T Consensus 108 ~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~dG~~p~~npf~ 187 (354)
T 3a9g_A 108 IRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTGDAADPRLAQDLSSLAGKILRVDEEGRPPADNPFP 187 (354)
T ss_dssp EEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECCCTTCGGGGTCTTCCSSEEEEECTTSCCCTTSSST
T ss_pred EEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEECCCCCCccccCCCCCCeEEEEEcCCCCCCCCCCCC
Confidence 77776543 111 11221 11123567776 344444322 2456666654320
Q ss_pred ccEEEeccccCCeEEEEEeC-CCCEEEEEeCCC---cEEEEECCC----------------CceeEEeccCCCcEEEEEE
Q 014934 282 DFVSKLSGHKSEVCGLKWSY-DNRELASGGNDN---RLFVWNQHS----------------TQPVLKYCEHTAAVKAIAW 341 (415)
Q Consensus 282 ~~~~~~~~h~~~V~~l~~sp-dg~~lasg~~dg---~I~iwd~~~----------------~~~~~~~~~h~~~V~~l~~ 341 (415)
.......+|. ....++|+| +|+++++-...+ .|.+...-. ..++..+.........++|
T Consensus 188 ~~~i~a~G~r-np~Gla~d~~~g~l~v~d~g~~~~dei~~i~~G~nyGwp~~~g~~~~~~~~~p~~~~~~~~~ap~G~~~ 266 (354)
T 3a9g_A 188 NSPIWSYGHR-NPQGIDWHRASGVMVATEHGPVGHDEVNIILKGGNYGWPLATGKAGRGEFVDPVIDTGSETWAPSGASF 266 (354)
T ss_dssp TCCEEEECCS-CCCEEEECTTTCCEEEEECCSSSCCEEEEECTTCBCCTTTCCSCCCCTTSCCCSEECTTCCCCEEEEEE
T ss_pred CCcEEEEccC-CcceEEEeCCCCCEEEEecCCCCCcEEEEecCCCcCCCCcccCCCCCCCCcCCEeecCCCCcCCcceEE
Confidence 0111223443 356899999 676665533222 244332110 1244444222346788888
Q ss_pred c-------CCCCcEEEEEcCCCCCeEEEEECCCC-cEE--EEeeC--CCCEEEEEECCCCCeEEEE
Q 014934 342 S-------PHLHGLLASGGGTADRCIRFWNTTTN-THL--SCMDT--GSQVCNLVWSKNVNELVST 395 (415)
Q Consensus 342 s-------p~~~~llasggg~~d~~I~iwd~~t~-~~~--~~~~~--~~~V~~l~~s~~~~~l~s~ 395 (415)
. .++ .++++.- ..+.|...++... +.. ..+-. ...+..+++.|||..++++
T Consensus 267 y~g~~fp~~~G-~l~v~~~--~~~~v~~~~~~~~g~~~~~~~~~~~~~~rp~~v~~~pDG~lyv~~ 329 (354)
T 3a9g_A 267 VHGDMFPGLRG-WLLIACL--RGSMLAAVNFGDNMEVRKISTFFKNVFGRLRDVVIDDDGGILIST 329 (354)
T ss_dssp CCSSSCGGGTT-EEEEEET--TTTEEEEEEECGGGCEEEEEEECTTTSCCEEEEEECTTSCEEEEE
T ss_pred ECCCCCcccCC-cEEEEEc--CCCEEEEEEECCCCcccceeeeccCCCCCeeEEEECCCCcEEEEE
Confidence 4 344 3666553 5678888888753 332 22222 4578999999999877663
No 329
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=96.32 E-value=0.12 Score=47.63 Aligned_cols=175 Identities=11% Similarity=0.117 Sum_probs=90.9
Q ss_pred EEEEECCCCCeEEeEecCCC-CCeEEEEEcCCCCeEEEEECC-------CcEEEEECCCCeeeE--EecCCCccEEEEEe
Q 014934 189 VYLWNACSSKVTKLCDLGID-DSVCSVGWANRNTHLAVGTSH-------GKVQIWDASRCKRVR--TMEGHRLRVGALAW 258 (415)
Q Consensus 189 V~iwd~~~~~~~~~~~~~~~-~~V~~v~~sp~g~~la~g~~d-------g~V~iwd~~~~~~~~--~l~~h~~~V~~l~~ 258 (415)
+..||..+.+...+-..... .....+.+ +++.++.|+.+ ..+.+||..+.+-.. .+........++..
T Consensus 80 ~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~ 157 (318)
T 2woz_A 80 FFQLDNVSSEWVGLPPLPSARCLFGLGEV--DDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVYGHNVISH 157 (318)
T ss_dssp EEEEETTTTEEEECSCBSSCBCSCEEEEE--TTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCEESCEEEEE
T ss_pred EEEEeCCCCcEEECCCCCccccccceEEE--CCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCcccccEEEEE
Confidence 88899988877665433221 12222222 67777777754 248889988764322 22211111223334
Q ss_pred eCCEEEEEeC------CCcEEEEECCCCCccEEEeccccC--CeEEEEEeCCCCEEEEEeCC-----CcEEEEECCCCce
Q 014934 259 SSSLLSSGSR------DKSILQRDIRAQEDFVSKLSGHKS--EVCGLKWSYDNRELASGGND-----NRLFVWNQHSTQP 325 (415)
Q Consensus 259 ~~~~l~sgs~------dg~I~iwd~~~~~~~~~~~~~h~~--~V~~l~~spdg~~lasg~~d-----g~I~iwd~~~~~~ 325 (415)
.+.+++.|+. -..+.+||+.+.. ...+..... .-.+++. -++++++.|+.+ +.+.+||+.+.+-
T Consensus 158 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~--W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W 234 (318)
T 2woz_A 158 NGMIYCLGGKTDDKKCTNRVFIYNPKKGD--WKDLAPMKTPRSMFGVAI-HKGKIVIAGGVTEDGLSASVEAFDLKTNKW 234 (318)
T ss_dssp TTEEEEECCEESSSCBCCCEEEEETTTTE--EEEECCCSSCCBSCEEEE-ETTEEEEEEEEETTEEEEEEEEEETTTCCE
T ss_pred CCEEEEEcCCCCCCCccceEEEEcCCCCE--EEECCCCCCCcccceEEE-ECCEEEEEcCcCCCCccceEEEEECCCCeE
Confidence 4666677764 2358999998765 222221111 1112222 267777887754 3578899887643
Q ss_pred eEE--eccCCCcEEEEEEcCCCCcEEEEEcCCC------------CCeEEEEECCCCcEE
Q 014934 326 VLK--YCEHTAAVKAIAWSPHLHGLLASGGGTA------------DRCIRFWNTTTNTHL 371 (415)
Q Consensus 326 ~~~--~~~h~~~V~~l~~sp~~~~llasggg~~------------d~~I~iwd~~t~~~~ 371 (415)
... +.........+.+ + ..+++.||... -..+.+||+.+.+-.
T Consensus 235 ~~~~~~p~~r~~~~~~~~--~-~~i~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~ 291 (318)
T 2woz_A 235 EVMTEFPQERSSISLVSL--A-GSLYAIGGFAMIQLESKEFAPTEVNDIWKYEDDKKEWA 291 (318)
T ss_dssp EECCCCSSCCBSCEEEEE--T-TEEEEECCBCCBC----CCBCCBCCCEEEEETTTTEEE
T ss_pred EECCCCCCcccceEEEEE--C-CEEEEECCeeccCCCCceeccceeeeEEEEeCCCCEeh
Confidence 221 1111111122222 2 34777775211 245778888876543
No 330
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=96.29 E-value=0.1 Score=54.28 Aligned_cols=191 Identities=15% Similarity=0.215 Sum_probs=107.4
Q ss_pred CCcEEEEEc-C----CeEEEEECCCCCeEEeE-e-----cCC-CCCeEEEEEcCCCCeEEEEECC------CcEEEEECC
Q 014934 177 SHNVLAVGL-G----NCVYLWNACSSKVTKLC-D-----LGI-DDSVCSVGWANRNTHLAVGTSH------GKVQIWDAS 238 (415)
Q Consensus 177 ~~~~la~~~-d----~~V~iwd~~~~~~~~~~-~-----~~~-~~~V~~v~~sp~g~~la~g~~d------g~V~iwd~~ 238 (415)
.+.+++.|. + +.+++||..+++...+. . ... ...-.++.+..+++.++.|+.+ ..+.+||..
T Consensus 397 ~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~~ 476 (695)
T 2zwa_A 397 GNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDMK 476 (695)
T ss_dssp SSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEETT
T ss_pred CCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeCC
Confidence 355555553 1 46999999998877665 2 111 1222333333277888888754 358899988
Q ss_pred CCe--eeEEecCCCccEEEEEe-eCCEEEEEeCCC--cEEEEECCCCCccEEEecc------ccCCeEEEEEeCC-CCEE
Q 014934 239 RCK--RVRTMEGHRLRVGALAW-SSSLLSSGSRDK--SILQRDIRAQEDFVSKLSG------HKSEVCGLKWSYD-NREL 306 (415)
Q Consensus 239 ~~~--~~~~l~~h~~~V~~l~~-~~~~l~sgs~dg--~I~iwd~~~~~~~~~~~~~------h~~~V~~l~~spd-g~~l 306 (415)
+.+ .+..+......-.++.+ .+.+++.|+.++ .+.+||+.+.. ...+.. ......++.+..+ +.++
T Consensus 477 t~~W~~~~~~p~~R~~h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~--W~~~~~~g~~p~~r~~~~a~v~~~~~~~iy 554 (695)
T 2zwa_A 477 TREWSMIKSLSHTRFRHSACSLPDGNVLILGGVTEGPAMLLYNVTEEI--FKDVTPKDEFFQNSLVSAGLEFDPVSKQGI 554 (695)
T ss_dssp TTEEEECCCCSBCCBSCEEEECTTSCEEEECCBCSSCSEEEEETTTTE--EEECCCSSGGGGSCCBSCEEEEETTTTEEE
T ss_pred CCcEEECCCCCCCcccceEEEEcCCEEEEECCCCCCCCEEEEECCCCc--eEEccCCCCCCCcccceeEEEEeCCCCEEE
Confidence 753 33223322233344444 577888887655 69999998765 222221 1122233555655 6677
Q ss_pred EEEeC--C-----CcEEEEECCCCce-----eEEecc----CCCcEEEEEEcCCCCcEEEEEcCC------CCCeEEEEE
Q 014934 307 ASGGN--D-----NRLFVWNQHSTQP-----VLKYCE----HTAAVKAIAWSPHLHGLLASGGGT------ADRCIRFWN 364 (415)
Q Consensus 307 asg~~--d-----g~I~iwd~~~~~~-----~~~~~~----h~~~V~~l~~sp~~~~llasggg~------~d~~I~iwd 364 (415)
+.||. + +.+.+||+.+.+. ...+.. ......++. ..++ .+++.||.. ....|.+||
T Consensus 555 v~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~~~~~-~~~~-~iyv~GG~~~~~~~~~~~~v~~yd 632 (695)
T 2zwa_A 555 ILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGSQIKY-ITPR-KLLIVGGTSPSGLFDRTNSIISLD 632 (695)
T ss_dssp EECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSCEEEE-EETT-EEEEECCBCSSCCCCTTTSEEEEE
T ss_pred EECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcccceEEE-eCCC-EEEEECCccCCCCCCCCCeEEEEE
Confidence 77775 2 4589999887761 122211 111122222 2223 477777521 235699999
Q ss_pred CCCCcEE
Q 014934 365 TTTNTHL 371 (415)
Q Consensus 365 ~~t~~~~ 371 (415)
+.+.+-.
T Consensus 633 ~~t~~W~ 639 (695)
T 2zwa_A 633 PLSETLT 639 (695)
T ss_dssp TTTTEEE
T ss_pred CCCCeEE
Confidence 9987654
No 331
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=96.27 E-value=0.4 Score=45.27 Aligned_cols=138 Identities=15% Similarity=0.112 Sum_probs=82.8
Q ss_pred CCCcEEEEECCCCCccEEE--ecc-----ccCCeEEEEEeC--CCC-EEEEE-eC--CCcEEEEECCCCc----eeEEec
Q 014934 268 RDKSILQRDIRAQEDFVSK--LSG-----HKSEVCGLKWSY--DNR-ELASG-GN--DNRLFVWNQHSTQ----PVLKYC 330 (415)
Q Consensus 268 ~dg~I~iwd~~~~~~~~~~--~~~-----h~~~V~~l~~sp--dg~-~lasg-~~--dg~I~iwd~~~~~----~~~~~~ 330 (415)
.+|.|.++|..+....... +.+ ......+|.+.+ ++. +|+++ .. +..|.+|++.... .+..+.
T Consensus 81 ~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~ 160 (355)
T 3sre_A 81 KSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIR 160 (355)
T ss_dssp -CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEEEEEECSTTCCEEEEEEEETTTTEEEEEEEEC
T ss_pred CCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEEEEEECCCCCCeEEEEEEECCCCEEEEEeccc
Confidence 6899999998743211222 222 234677888766 454 34443 33 4577787765432 223343
Q ss_pred cC-CCcEEEEEEcCCCCcEEEEEcC---------------CCCCeEEEEECCCCcEEEEeeCCCCEEEEEECCCCCeEEE
Q 014934 331 EH-TAAVKAIAWSPHLHGLLASGGG---------------TADRCIRFWNTTTNTHLSCMDTGSQVCNLVWSKNVNELVS 394 (415)
Q Consensus 331 ~h-~~~V~~l~~sp~~~~llasggg---------------~~d~~I~iwd~~t~~~~~~~~~~~~V~~l~~s~~~~~l~s 394 (415)
+. -...+.+++.++|. ++++... ...+.|..+|. ++.......-...+.++|+||++.|..
T Consensus 161 g~~~~~pND~~v~~~G~-fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~--~~~~~~~~~l~~pNGia~spDg~~lYv 237 (355)
T 3sre_A 161 HKLLPSVNDIVAVGPEH-FYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSP--NDVRVVAEGFDFANGINISPDGKYVYI 237 (355)
T ss_dssp CTTCSSEEEEEEEETTE-EEEEESCSCSSHHHHHHHHHTTCCCEEEEEECT--TCCEEEEEEESSEEEEEECTTSSEEEE
T ss_pred cCCCCCCceEEEeCCCC-EEecCCcEeCCcccccchhhccCCccEEEEEEC--CeEEEeecCCcccCcceECCCCCEEEE
Confidence 22 24578999999987 6665431 01245655655 333222333456789999999998887
Q ss_pred EEecCCCcEEEEECC
Q 014934 395 THGYSQNQIIVWRYP 409 (415)
Q Consensus 395 ~~g~~dg~I~vw~~~ 409 (415)
+ .+..+.|..|++.
T Consensus 238 a-dt~~~~I~~~~~~ 251 (355)
T 3sre_A 238 A-ELLAHKIHVYEKH 251 (355)
T ss_dssp E-EGGGTEEEEEEEC
T ss_pred E-eCCCCeEEEEEEC
Confidence 6 3456899999986
No 332
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=96.26 E-value=0.7 Score=42.54 Aligned_cols=208 Identities=11% Similarity=0.056 Sum_probs=119.2
Q ss_pred CcEEEEEc---CCeEEEEECCCCCeEEeEecCCCCCeEEEEEcCCCCeEEEEECC--------------CcEEEEECCCC
Q 014934 178 HNVLAVGL---GNCVYLWNACSSKVTKLCDLGIDDSVCSVGWANRNTHLAVGTSH--------------GKVQIWDASRC 240 (415)
Q Consensus 178 ~~~la~~~---d~~V~iwd~~~~~~~~~~~~~~~~~V~~v~~sp~g~~la~g~~d--------------g~V~iwd~~~~ 240 (415)
+..|..+. ++.|+..+.......++.. +. +--++++|.+|..+... ..|+..++...
T Consensus 25 g~~iy~~n~~d~~~ly~~~~dg~~~~~l~~----~~--~~~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg~ 98 (302)
T 3s25_A 25 DGEVFFSNTNDNGRLYAMNIDGSNIHKLSN----DT--AMYINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNGH 98 (302)
T ss_dssp TTEEEEEEGGGTTEEEEEETTSCSCEEEEE----EE--EEEEEECSSEEEEEEECC------CCSSCCSEEEEEEETTSC
T ss_pred CCEEEEEeCCCCceEEEEcCCCCCCEEccC----Cc--eeeEEEcCCEEEEEECCCCcccccceeccCCCeEEEEeCCCC
Confidence 45555553 5678888887767666653 22 33457889988877553 35677777655
Q ss_pred eeeEEecCCCccEEEEEeeCCEEEEEe----CCCcEEEEECCCCCccEEEeccccCCeEEEEEeCCCCEEEEEeC-CCcE
Q 014934 241 KRVRTMEGHRLRVGALAWSSSLLSSGS----RDKSILQRDIRAQEDFVSKLSGHKSEVCGLKWSYDNRELASGGN-DNRL 315 (415)
Q Consensus 241 ~~~~~l~~h~~~V~~l~~~~~~l~sgs----~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~spdg~~lasg~~-dg~I 315 (415)
+... +.. .....++..++.|+-.. .+..|+..++.... ...+..+.. ..++++++.|.-.+. ...|
T Consensus 99 ~~~~-l~~--~~~~~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dGs~--~~~lt~~~~----~~~~~~g~~iy~t~~g~~~I 169 (302)
T 3s25_A 99 GSTV-LDP--DPCIYASLIGNYIYYLHYDTQTATSLYRIRIDGEE--KKKIKNHYL----FTCNTSDRYFYYNNPKNGQL 169 (302)
T ss_dssp CCEE-EEC--SCEEEEEEETTEEEEEEESSSSCEEEEEEETTSCC--CEEEESSCC----CCSEEETTEEEEECTTTCCE
T ss_pred cceE-eec--CCccEEEEeCCEEEEEeecCCCCceEEEEECCCCC--eEEEeCCCc----eEeeEECCEEEEEeCCCceE
Confidence 4333 221 22334555677766554 34456666776544 334443332 456778888876554 6789
Q ss_pred EEEECCCCceeEEeccCCCcEEEEEEcCCCCcEEEEEcCCCCCeEEEEECCCCcEEEEeeCCCCEEEEEECCCCCeEEEE
Q 014934 316 FVWNQHSTQPVLKYCEHTAAVKAIAWSPHLHGLLASGGGTADRCIRFWNTTTNTHLSCMDTGSQVCNLVWSKNVNELVST 395 (415)
Q Consensus 316 ~iwd~~~~~~~~~~~~h~~~V~~l~~sp~~~~llasggg~~d~~I~iwd~~t~~~~~~~~~~~~V~~l~~s~~~~~l~s~ 395 (415)
++-++..+.....+.+ ... ..+.|++.+|+.+..+ ....|..-++..+.... + +...+ ..|+|++..|..+
T Consensus 170 y~~~l~g~~~~~l~~~---~~~-~~~~P~g~~iy~t~~~-~~~~I~~~~ldG~~~~~-L-t~~~~--~~~~~~g~~Iy~~ 240 (302)
T 3s25_A 170 YRYDTASQSEALFYDC---NCY-KPVVLDDTNVYYMDVN-RDNAIVHVNINNPNPVV-L-TEANI--EHYNVYGSLIFYQ 240 (302)
T ss_dssp EEEETTTTEEEEEECS---CEE-EEEEEETTEEEEEEGG-GTTEEEEECSSSCCCEE-C-SCSCE--EEEEEETTEEEEE
T ss_pred EEEECCCCCEEEEeCC---Ccc-ceeeecCCEEEEEEcC-CCcEEEEEECCCCCeEE-E-eCCCc--ceEEECCCEEEEE
Confidence 9999876654333332 222 3456888888777641 22467777776554322 2 22333 3367777777654
Q ss_pred EecCCCcEEEEECC
Q 014934 396 HGYSQNQIIVWRYP 409 (415)
Q Consensus 396 ~g~~dg~I~vw~~~ 409 (415)
.....+.|..-++.
T Consensus 241 ~~~~~~~i~~~~~D 254 (302)
T 3s25_A 241 RGGDNPALCVVKND 254 (302)
T ss_dssp ECSSSCEEEEEETT
T ss_pred ECCCCcEEEEEECC
Confidence 22223455555554
No 333
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=96.10 E-value=0.22 Score=46.57 Aligned_cols=184 Identities=13% Similarity=0.046 Sum_probs=92.4
Q ss_pred CeEEEEECCCCCeEEeEecC-CCCCeEEEEEcCCCCeEEEEECC------------------------------------
Q 014934 187 NCVYLWNACSSKVTKLCDLG-IDDSVCSVGWANRNTHLAVGTSH------------------------------------ 229 (415)
Q Consensus 187 ~~V~iwd~~~~~~~~~~~~~-~~~~V~~v~~sp~g~~la~g~~d------------------------------------ 229 (415)
+.+++||..+.+...+.... ....-.++.. .++++++.|+.+
T Consensus 86 ~~v~~yd~~~~~W~~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (357)
T 2uvk_A 86 NDVHKYNPKTNSWVKLMSHAPMGMAGHVTFV-HNGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAHYFDKKAEDY 164 (357)
T ss_dssp CCEEEEETTTTEEEECSCCCSSCCSSEEEEE-ETTEEEEEECCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHSSCGGGG
T ss_pred ccEEEEeCCCCcEEECCCCCCcccccceEEE-ECCEEEEEeCcCCCcCcccccchhhcCCcccchhhhhhhhcccccccc
Confidence 35999999998776655433 2111122222 577888888754
Q ss_pred ---CcEEEEECCCCe--eeEEecCCCcc-EEEEEeeCCEEEEEeC------CCcEEEEECCCCCccEEEeccc---cCCe
Q 014934 230 ---GKVQIWDASRCK--RVRTMEGHRLR-VGALAWSSSLLSSGSR------DKSILQRDIRAQEDFVSKLSGH---KSEV 294 (415)
Q Consensus 230 ---g~V~iwd~~~~~--~~~~l~~h~~~-V~~l~~~~~~l~sgs~------dg~I~iwd~~~~~~~~~~~~~h---~~~V 294 (415)
..+.+||..+.+ .+..+...... ..++...+.+++.|+. ...+.++|+.........+... ....
T Consensus 165 ~~~~~v~~yd~~~~~W~~~~~~p~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~~W~~~~~~~~~~~~~ 244 (357)
T 2uvk_A 165 FFNKFLLSFDPSTQQWSYAGESPWYGTAGAAVVNKGDKTWLINGEAKPGLRTDAVFELDFTGNNLKWNKLAPVSSPDGVA 244 (357)
T ss_dssp CCCCEEEEEETTTTEEEEEEECSSCCCBSCEEEEETTEEEEECCEEETTEECCCEEEEECC---CEEEECCCSSTTTCCB
T ss_pred CCcccEEEEeCCCCcEEECCCCCCCCcccccEEEECCEEEEEeeecCCCcccCceEEEEecCCCCcEEecCCCCCCcccc
Confidence 478999998754 33333321111 3333444666666654 3457778873222112222211 1111
Q ss_pred EEEEEeCCCCEEEEEeCC----------------------CcEEEEECCCCce--eEEeccCCCcEEEEEEcCCCCcEEE
Q 014934 295 CGLKWSYDNRELASGGND----------------------NRLFVWNQHSTQP--VLKYCEHTAAVKAIAWSPHLHGLLA 350 (415)
Q Consensus 295 ~~l~~spdg~~lasg~~d----------------------g~I~iwd~~~~~~--~~~~~~h~~~V~~l~~sp~~~~lla 350 (415)
...+...++++++.|+.+ ..+.+||+.+.+- +..+........++.+ ++ .+++
T Consensus 245 ~~~~~~~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~-~i~v 321 (357)
T 2uvk_A 245 GGFAGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKWDKSGELSQGRAYGVSLPW--NN-SLLI 321 (357)
T ss_dssp SCEEEEETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC---CEEEEECSSCCBSSEEEEE--TT-EEEE
T ss_pred cceEEEECCEEEEEcCccccCCcccccccceeccccccceeeEEEEecCCCceeeCCCCCCCcccceeEEe--CC-EEEE
Confidence 111222367777777732 2578999886543 2223222222222222 33 4777
Q ss_pred EEcCCCC----CeEEEEECCCCcEEEEe
Q 014934 351 SGGGTAD----RCIRFWNTTTNTHLSCM 374 (415)
Q Consensus 351 sggg~~d----~~I~iwd~~t~~~~~~~ 374 (415)
.||...+ ..|.++++.+++.+...
T Consensus 322 ~GG~~~~~~~~~~v~~l~~~~~~~~~~~ 349 (357)
T 2uvk_A 322 IGGETAGGKAVTDSVLITVKDNKVTVQN 349 (357)
T ss_dssp EEEECGGGCEEEEEEEEEC-CCSCEEEC
T ss_pred EeeeCCCCCEeeeEEEEEEcCcEeEeee
Confidence 7762222 24666688888766544
No 334
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=96.09 E-value=0.18 Score=55.69 Aligned_cols=180 Identities=14% Similarity=0.177 Sum_probs=111.1
Q ss_pred eeEeecCCCcEEEEEcCCeEEEEECCCC-CeEEeEecCC----CCCeEEEEEcCCCCeEEEEE-------CCCcEEEEEC
Q 014934 170 LNLVDWSSHNVLAVGLGNCVYLWNACSS-KVTKLCDLGI----DDSVCSVGWANRNTHLAVGT-------SHGKVQIWDA 237 (415)
Q Consensus 170 i~~l~ws~~~~la~~~d~~V~iwd~~~~-~~~~~~~~~~----~~~V~~v~~sp~g~~la~g~-------~dg~V~iwd~ 237 (415)
|.--.|-..+.|+.-.+..||-|++.+. .+.++++ .| ...|..-..+++.++++..+ -.|.+++|..
T Consensus 108 VvfWkWis~~~l~lVT~~aVyHW~~~~~s~P~k~fd-R~~~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~ 186 (1630)
T 1xi4_A 108 VTFWKWISLNTVALVTDNAVYHWSMEGESQPVKMFD-RHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSV 186 (1630)
T ss_pred ceEEEecCCCeeEEEcCCeEEEeccCCCCccHHHHh-cchhcccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeec
Confidence 5556788888888888999999999642 3444443 22 35577777788888776543 3588999998
Q ss_pred CCCeeeEEecCCCccEEEEEeeC----C-EEEEEeC---CCcEEEEECCCC---C-cc----EEEeccc---cCCeEEEE
Q 014934 238 SRCKRVRTMEGHRLRVGALAWSS----S-LLSSGSR---DKSILQRDIRAQ---E-DF----VSKLSGH---KSEVCGLK 298 (415)
Q Consensus 238 ~~~~~~~~l~~h~~~V~~l~~~~----~-~l~sgs~---dg~I~iwd~~~~---~-~~----~~~~~~h---~~~V~~l~ 298 (415)
+.. .-+.+.||.+....+...+ . +++.+.+ .+.+.|.++... . .. +..+... ..-.-++.
T Consensus 187 er~-~sQ~iegha~~F~~~~~~~~~~~~~l~~f~~~~~~g~kLhi~Ei~~~~~~~~~f~kk~~~~~~~~~~~~Dfpv~~~ 265 (1630)
T 1xi4_A 187 DRK-VSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQ 265 (1630)
T ss_pred ccc-cchhhhHhHhhhheeccCCCCCCceEEEEEEecCCCceEEEEecCCCccCCCCCccccccccCCcccccCcceEEE
Confidence 753 3445677776665555542 2 3332322 268888888653 1 00 1111111 12234577
Q ss_pred EeCCCCEEEEEeCCCcEEEEECCCCceeEEeccCCCcEEEEEEcCCCCcEEEE
Q 014934 299 WSYDNRELASGGNDNRLFVWNQHSTQPVLKYCEHTAAVKAIAWSPHLHGLLAS 351 (415)
Q Consensus 299 ~spdg~~lasg~~dg~I~iwd~~~~~~~~~~~~h~~~V~~l~~sp~~~~llas 351 (415)
.++.-..+..-+.-|.|++||+.++.++..-+-....|...+-.....++++.
T Consensus 266 vs~k~g~iy~itk~G~~~~~d~~t~~~i~~~ris~~~iF~~~~~~~~~g~~~v 318 (1630)
T 1xi4_A 266 ISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISGETIFVTAPHEATAGIIGV 318 (1630)
T ss_pred eccccCEEEEEecCceEEEEecccchhhhhccccCCceEEeccCCCCCceEEE
Confidence 77777788888899999999999998876544333444433333333334443
No 335
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=95.93 E-value=0.22 Score=48.00 Aligned_cols=121 Identities=14% Similarity=0.094 Sum_probs=83.2
Q ss_pred CCCceeccCCC-CCCCcceeEeecCC-CcEEEEEcCCeEEEEECCCCC------------eEEeEecC-----CCCCeEE
Q 014934 153 RSPYKILDAPA-LQDDFYLNLVDWSS-HNVLAVGLGNCVYLWNACSSK------------VTKLCDLG-----IDDSVCS 213 (415)
Q Consensus 153 ~~p~~~ld~~~-l~~~~~i~~l~ws~-~~~la~~~d~~V~iwd~~~~~------------~~~~~~~~-----~~~~V~~ 213 (415)
...|++|+.|. +.. ..+..+-.|| +++||+..+..|.|-.+..+. ..+.+.++ ....|..
T Consensus 51 ~~~Yk~L~~~~~i~f-~~i~qlvlSpsG~lLAl~g~~~V~Vv~LP~~~~~~~~~~~~~~~q~~ty~l~~~~~~~~s~I~q 129 (452)
T 3pbp_A 51 DSLYHSLNFSRHLVL-DDTFHVISSTSGDLLCLFNDNEIFVMEVPWGYSNVEDVSIQDAFQIFHYSIDEEEVGPKSSIKK 129 (452)
T ss_dssp CSSCEEEECTTTCCC-CTTCEEEECTTSSEEEEECSSEEEEEECCTTCSCCCCHHHHHTTEEEEEEGGGCC--CCCCEEE
T ss_pred CCcceEEecCccccc-CceeEEEECCCCCEEEEecCCeEEEEEecCccccCcccccccccceeEEEcCCcccCCCCceeE
Confidence 35799999985 322 1355678888 999999999999999886332 11233333 2567999
Q ss_pred EEEcCC---CCeEEEEECCCcEEEEECCCC--eeeEEec---------CCCccEEEEEeeC--CEEEE--EeCCCcEEEE
Q 014934 214 VGWANR---NTHLAVGTSHGKVQIWDASRC--KRVRTME---------GHRLRVGALAWSS--SLLSS--GSRDKSILQR 275 (415)
Q Consensus 214 v~~sp~---g~~la~g~~dg~V~iwd~~~~--~~~~~l~---------~h~~~V~~l~~~~--~~l~s--gs~dg~I~iw 275 (415)
+.|+|- |..|++-+.|+.|++||+... ++. .+. .....|.+++|.+ -.|.. .++.|.|+-.
T Consensus 130 VlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~-~L~k~~~~fg~d~~~~ev~S~~Fg~~~lTLYvl~~t~~GDIYAl 208 (452)
T 3pbp_A 130 VLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPI-VLNKPNNSFGLDARVNDITDLEFSKDGLTLYCLNTTEGGDIFAF 208 (452)
T ss_dssp EEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCE-EESCCCSEEESCSSCCCEEEEEECTTSSCEEEEECTTSCEEEEE
T ss_pred EEeccccCCCCeEEEEecCCEEEEEEcccCCCCCc-chhccccccCCCcccceEEEEEEcCCCcEEEEEecCCCCCEEEE
Confidence 999994 568999999999999999752 122 332 2235688889983 34555 4477887653
No 336
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=95.28 E-value=0.042 Score=51.73 Aligned_cols=110 Identities=10% Similarity=0.006 Sum_probs=70.2
Q ss_pred CeEEEEECCCcEEEEECCCCeeeEEecCC-CccEEEEEee----CCEEEEE--eCCCcEEEEECCCCCccEEEecc----
Q 014934 221 THLAVGTSHGKVQIWDASRCKRVRTMEGH-RLRVGALAWS----SSLLSSG--SRDKSILQRDIRAQEDFVSKLSG---- 289 (415)
Q Consensus 221 ~~la~g~~dg~V~iwd~~~~~~~~~l~~h-~~~V~~l~~~----~~~l~sg--s~dg~I~iwd~~~~~~~~~~~~~---- 289 (415)
..+++++.||.|.-+|..+|+.+=.++.. ..++....-. +..++.+ +.||.|+.+|..++... ..+..
T Consensus 11 ~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~-~~~~~~~lv 89 (339)
T 2be1_A 11 DILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQK-LPLSIRQLV 89 (339)
T ss_dssp EEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEE-EEEEHHHHH
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEE-eeeccccce
Confidence 46888999999999999999888777643 1122211111 2244444 68999999998776422 11111
Q ss_pred ccCCeEE---EEE-e----CCCCEEEEEeCCCcEEEEECCCCceeEEecc
Q 014934 290 HKSEVCG---LKW-S----YDNRELASGGNDNRLFVWNQHSTQPVLKYCE 331 (415)
Q Consensus 290 h~~~V~~---l~~-s----pdg~~lasg~~dg~I~iwd~~~~~~~~~~~~ 331 (415)
...++.. ... . -.+..+.+|+.+|++...|+++|+.+.++..
T Consensus 90 ~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~ 139 (339)
T 2be1_A 90 STSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFGP 139 (339)
T ss_dssp TTCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEEST
T ss_pred eccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEec
Confidence 1112221 000 0 1456788999999999999999999999863
No 337
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=95.18 E-value=2.1 Score=40.12 Aligned_cols=142 Identities=10% Similarity=0.106 Sum_probs=80.6
Q ss_pred CCeEEEEEcCCCCeEEEEECCCcEEEEECCCCeeeEE---e----cCCCccEEEEEeeC-----CEEEEEe-C-------
Q 014934 209 DSVCSVGWANRNTHLAVGTSHGKVQIWDASRCKRVRT---M----EGHRLRVGALAWSS-----SLLSSGS-R------- 268 (415)
Q Consensus 209 ~~V~~v~~sp~g~~la~g~~dg~V~iwd~~~~~~~~~---l----~~h~~~V~~l~~~~-----~~l~sgs-~------- 268 (415)
.....|+|.|+|++|.++...|.|.+++.. ++.... + .........|++++ ..|.... .
T Consensus 18 ~~P~~i~~~pdG~~l~V~e~~G~i~~~~~~-g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~~ 96 (353)
T 2g8s_A 18 DHPWALAFLPDNHGMLITLRGGELRHWQAG-KGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDGKA 96 (353)
T ss_dssp SSEEEEEECSTTCCEEEEETTTEEEEEETT-TEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSSCE
T ss_pred CCcEEEEEcCCCCEEEEEeCCceEEEEeCC-CceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCCCc
Confidence 457899999999845566778999999853 332111 1 11234578899985 3444432 2
Q ss_pred CCcEEEEECCCCC----ccEEEecc------ccCCeEEEEEeCCCCEEEEEeC-------------CCcEEEEECCCC--
Q 014934 269 DKSILQRDIRAQE----DFVSKLSG------HKSEVCGLKWSYDNRELASGGN-------------DNRLFVWNQHST-- 323 (415)
Q Consensus 269 dg~I~iwd~~~~~----~~~~~~~~------h~~~V~~l~~spdg~~lasg~~-------------dg~I~iwd~~~~-- 323 (415)
...|..+++.... .....+.. .......|.|.|||.++++-+. .|.|.-+|....
T Consensus 97 ~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~~dG~~p 176 (353)
T 2g8s_A 97 GTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIALGENNQRPTAQDLDKLQGKLVRLTDQGEIP 176 (353)
T ss_dssp EEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEECCTTCGGGGGCTTSCTTEEEEEETTSCCC
T ss_pred eeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEEECCCCCCCccCCCCCCCeEEEEECCCCCCC
Confidence 2356667665331 11111111 1112467999999976666443 246777776532
Q ss_pred ------------ceeEEeccCCCcEEEEEEcCCCCcEEEEEc
Q 014934 324 ------------QPVLKYCEHTAAVKAIAWSPHLHGLLASGG 353 (415)
Q Consensus 324 ------------~~~~~~~~h~~~V~~l~~sp~~~~llasgg 353 (415)
..+... +|. ....++|.|....|+++-.
T Consensus 177 ~~npf~~~~~~~~~i~a~-G~r-np~gl~~d~~~g~l~~~d~ 216 (353)
T 2g8s_A 177 DDNPFIKESGVRAEIWSY-GIR-NPQGMAMNPWSNALWLNEH 216 (353)
T ss_dssp TTCTTTTSTTSCTTEEEE-CCS-EEEEEEEETTTTEEEEEEE
T ss_pred CCCCCcCCCCCCccEEEE-cCc-CccceEEECCCCCEEEEec
Confidence 112222 343 4688999994334766543
No 338
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=94.90 E-value=2.2 Score=39.16 Aligned_cols=125 Identities=8% Similarity=-0.026 Sum_probs=75.8
Q ss_pred CcEEEEECCCCCccEEEeccccCCeEEEEEeCCCCEEEEEe----CCCcEEEEECCCCceeEEeccCCCcEEEEEEcCCC
Q 014934 270 KSILQRDIRAQEDFVSKLSGHKSEVCGLKWSYDNRELASGG----NDNRLFVWNQHSTQPVLKYCEHTAAVKAIAWSPHL 345 (415)
Q Consensus 270 g~I~iwd~~~~~~~~~~~~~h~~~V~~l~~spdg~~lasg~----~dg~I~iwd~~~~~~~~~~~~h~~~V~~l~~sp~~ 345 (415)
..|+..++...+. ..+.. .. +..|+++++.|+-.. .+..|+.-++... ...++..+.. .+|++++
T Consensus 88 ~~Iy~i~~dg~~~--~~l~~--~~--~~~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dGs-~~~~lt~~~~----~~~~~~g 156 (302)
T 3s25_A 88 NSLCRIKRNGHGS--TVLDP--DP--CIYASLIGNYIYYLHYDTQTATSLYRIRIDGE-EKKKIKNHYL----FTCNTSD 156 (302)
T ss_dssp EEEEEEETTSCCC--EEEEC--SC--EEEEEEETTEEEEEEESSSSCEEEEEEETTSC-CCEEEESSCC----CCSEEET
T ss_pred CeEEEEeCCCCcc--eEeec--CC--ccEEEEeCCEEEEEeecCCCCceEEEEECCCC-CeEEEeCCCc----eEeeEEC
Confidence 4577777776652 22221 11 236788899988765 3446777777643 3444544433 4567888
Q ss_pred CcEEEEEcCCCCCeEEEEECCCCcEEEEeeCCCCEEEEEECCCCCeEEEEEecCCCcEEEEECCC
Q 014934 346 HGLLASGGGTADRCIRFWNTTTNTHLSCMDTGSQVCNLVWSKNVNELVSTHGYSQNQIIVWRYPT 410 (415)
Q Consensus 346 ~~llasggg~~d~~I~iwd~~t~~~~~~~~~~~~V~~l~~s~~~~~l~s~~g~~dg~I~vw~~~s 410 (415)
+.|+.+.. ....|...++..+.....+. .... ..+.|++.+|+-+.......|..-++..
T Consensus 157 ~~iy~t~~--g~~~Iy~~~l~g~~~~~l~~--~~~~-~~~~P~g~~iy~t~~~~~~~I~~~~ldG 216 (302)
T 3s25_A 157 RYFYYNNP--KNGQLYRYDTASQSEALFYD--CNCY-KPVVLDDTNVYYMDVNRDNAIVHVNINN 216 (302)
T ss_dssp TEEEEECT--TTCCEEEEETTTTEEEEEEC--SCEE-EEEEEETTEEEEEEGGGTTEEEEECSSS
T ss_pred CEEEEEeC--CCceEEEEECCCCCEEEEeC--CCcc-ceeeecCCEEEEEEcCCCcEEEEEECCC
Confidence 88888764 46889999987765443332 2222 3356899998876433334566655554
No 339
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=94.67 E-value=3.5 Score=40.17 Aligned_cols=101 Identities=11% Similarity=0.089 Sum_probs=60.2
Q ss_pred CCeEEEEEcCCCCeEEEEECC-CcEEEEECCCCee--eEEecC------CCccEEEEEeeC-----CEEEEEeC------
Q 014934 209 DSVCSVGWANRNTHLAVGTSH-GKVQIWDASRCKR--VRTMEG------HRLRVGALAWSS-----SLLSSGSR------ 268 (415)
Q Consensus 209 ~~V~~v~~sp~g~~la~g~~d-g~V~iwd~~~~~~--~~~l~~------h~~~V~~l~~~~-----~~l~sgs~------ 268 (415)
....+++|.|+|+++++ ... +.|.+++..+++. +..+.. ....+..|+|++ ..|.....
T Consensus 27 ~~P~~~a~~pdG~l~V~-e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~~ 105 (454)
T 1cru_A 27 NKPHALLWGPDNQIWLT-ERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPKS 105 (454)
T ss_dssp SSEEEEEECTTSCEEEE-ETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTTC
T ss_pred CCceEEEEcCCCcEEEE-EcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccCC
Confidence 46789999999986665 555 4688888654432 223321 245678999984 44544432
Q ss_pred -------CCcEEEEECCCCC------c-cEEEec-cccCCeEEEEEeCCCCEEEEEe
Q 014934 269 -------DKSILQRDIRAQE------D-FVSKLS-GHKSEVCGLKWSYDNRELASGG 310 (415)
Q Consensus 269 -------dg~I~iwd~~~~~------~-~~~~~~-~h~~~V~~l~~spdg~~lasg~ 310 (415)
...|..++..... + .+..+. ........|+|.|||.++++.+
T Consensus 106 ~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~G 162 (454)
T 1cru_A 106 TDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIG 162 (454)
T ss_dssp --CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEEC
T ss_pred CccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEEC
Confidence 2356666654321 1 111121 1123578999999999887754
No 340
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=94.51 E-value=1 Score=46.67 Aligned_cols=150 Identities=15% Similarity=0.091 Sum_probs=83.8
Q ss_pred CCCCeEEEEECC----CcEEEEECCCCeeeEEe--------cCCCccEEEEEe--eCCEEEEEeCCC------cEEEEEC
Q 014934 218 NRNTHLAVGTSH----GKVQIWDASRCKRVRTM--------EGHRLRVGALAW--SSSLLSSGSRDK------SILQRDI 277 (415)
Q Consensus 218 p~g~~la~g~~d----g~V~iwd~~~~~~~~~l--------~~h~~~V~~l~~--~~~~l~sgs~dg------~I~iwd~ 277 (415)
.++..++.|+.+ ..+.+||..+++-...- ......-..+.+ .+.+++.|+.++ .+.+||.
T Consensus 396 ~~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~ 475 (695)
T 2zwa_A 396 AGNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDM 475 (695)
T ss_dssp CSSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEET
T ss_pred ECCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeC
Confidence 456677777643 45888998776432221 111223344555 566777777543 5788998
Q ss_pred CCCCccEEEeccccC--CeEEEEEeCCCCEEEEEeCCC--cEEEEECCCCceeEEe-----ccCCCcEEEEEEcCCCCcE
Q 014934 278 RAQEDFVSKLSGHKS--EVCGLKWSYDNRELASGGNDN--RLFVWNQHSTQPVLKY-----CEHTAAVKAIAWSPHLHGL 348 (415)
Q Consensus 278 ~~~~~~~~~~~~h~~--~V~~l~~spdg~~lasg~~dg--~I~iwd~~~~~~~~~~-----~~h~~~V~~l~~sp~~~~l 348 (415)
.+.. ...+..... .-.+++.-.++.+++.||.++ .+.+||..+.+-...- ........++.+......+
T Consensus 476 ~t~~--W~~~~~~p~~R~~h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~i 553 (695)
T 2zwa_A 476 KTRE--WSMIKSLSHTRFRHSACSLPDGNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQG 553 (695)
T ss_dssp TTTE--EEECCCCSBCCBSCEEEECTTSCEEEECCBCSSCSEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTTTEE
T ss_pred CCCc--EEECCCCCCCcccceEEEEcCCEEEEECCCCCCCCEEEEECCCCceEEccCCCCCCCcccceeEEEEeCCCCEE
Confidence 8754 222211111 111223324788888888655 6999999876432211 1111222335555553458
Q ss_pred EEEEcCCCC-----CeEEEEECCCCc
Q 014934 349 LASGGGTAD-----RCIRFWNTTTNT 369 (415)
Q Consensus 349 lasggg~~d-----~~I~iwd~~t~~ 369 (415)
++.||...+ ..+.+||+.+..
T Consensus 554 yv~GG~~~~~~~~~~~v~~yd~~~~~ 579 (695)
T 2zwa_A 554 IILGGGFMDQTTVSDKAIIFKYDAEN 579 (695)
T ss_dssp EEECCBCTTSSCBCCEEEEEEECTTC
T ss_pred EEECCcCCCCCeeeCcEEEEEccCCc
Confidence 887763222 468899998877
No 341
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=93.57 E-value=1 Score=39.44 Aligned_cols=136 Identities=10% Similarity=-0.019 Sum_probs=75.2
Q ss_pred CCeEEEEEcCCCCeEEEEECCCcEEEEECCCCeeeEEecCCCcc--------EEEEEeeC-CEEEEEeCCCcEEEEECCC
Q 014934 209 DSVCSVGWANRNTHLAVGTSHGKVQIWDASRCKRVRTMEGHRLR--------VGALAWSS-SLLSSGSRDKSILQRDIRA 279 (415)
Q Consensus 209 ~~V~~v~~sp~g~~la~g~~dg~V~iwd~~~~~~~~~l~~h~~~--------V~~l~~~~-~~l~sgs~dg~I~iwd~~~ 279 (415)
..++.++|+|+|.+.++ .+|.+.-.+..+.....-+. .... ..++.|.+ ..|..+ .||.|+-++-.+
T Consensus 41 ~~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~~W~~-s~t~IG~~Gw~~F~a~~fD~~G~LYav-~dG~iyr~~pP~ 116 (236)
T 1tl2_A 41 SNFKFLFLSPGGELYGV--LNDKIYKGTPPTHDNDNWMG-RAKKIGNGGWNQFQFLFFDPNGYLYAV-SKDKLYKASPPQ 116 (236)
T ss_dssp TTCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHH-HCEEEECSCGGGCSEEEECTTSCEEEE-ETTEEEEESCCC
T ss_pred ccceeEEECCCccEEEE--eCCeEEEECCCCCCcccccc-cccEecccccccceEEEECCCCCEEEe-CCCEEEEeCCCc
Confidence 46789999999997777 77776666654421111011 1122 35677774 334444 679998887643
Q ss_pred CCc--c----EEEeccccCCeEEEEEeCCCCEEEEEeCCCcEEEEECCCCc------eeEEec-cCCCcEEEEEEcCCCC
Q 014934 280 QED--F----VSKLSGHKSEVCGLKWSYDNRELASGGNDNRLFVWNQHSTQ------PVLKYC-EHTAAVKAIAWSPHLH 346 (415)
Q Consensus 280 ~~~--~----~~~~~~h~~~V~~l~~spdg~~lasg~~dg~I~iwd~~~~~------~~~~~~-~h~~~V~~l~~sp~~~ 346 (415)
... . ...-.+--..+..|.+.|+|.+.|.. |+.++-+..-+.. ....+- ..-..-+-+.|++++.
T Consensus 117 ~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~--dg~lyr~~~P~~~~~~wl~~~~~~g~~g~~~yr~l~f~~~G~ 194 (236)
T 1tl2_A 117 SDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH--GQQFYKALPPVSNQDNWLARATKIGQGGWDTFKFLFFSSVGT 194 (236)
T ss_dssp STTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE--TTEEEEECCCSSTTCCHHHHCEEEESSSGGGEEEEEECTTSC
T ss_pred CCCCceeccccEeccCCCCceEEEEECCCceEEEEe--CCcEEecCCCCCCCcccccccceeccCCcceEEEEEECCCCc
Confidence 221 0 11111122468999999999988887 7775543332111 011111 2222344466888775
Q ss_pred cEEEE
Q 014934 347 GLLAS 351 (415)
Q Consensus 347 ~llas 351 (415)
|++.
T Consensus 195 -l~~v 198 (236)
T 1tl2_A 195 -LFGV 198 (236)
T ss_dssp -EEEE
T ss_pred -EEEE
Confidence 4443
No 342
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=93.52 E-value=4.9 Score=37.55 Aligned_cols=221 Identities=12% Similarity=0.063 Sum_probs=118.5
Q ss_pred eeEeecCC-Cc-EEEEEcCCeEEEEECCCCCeEE-eEec-----CCCCCeEEEEEcCC---CCeEEEEE-C-------CC
Q 014934 170 LNLVDWSS-HN-VLAVGLGNCVYLWNACSSKVTK-LCDL-----GIDDSVCSVGWANR---NTHLAVGT-S-------HG 230 (415)
Q Consensus 170 i~~l~ws~-~~-~la~~~d~~V~iwd~~~~~~~~-~~~~-----~~~~~V~~v~~sp~---g~~la~g~-~-------dg 230 (415)
...|+|.| ++ ++++...+.|++++.. +.... +..+ ........|+++|+ +..|.+.. . ..
T Consensus 20 P~~i~~~pdG~~l~V~e~~G~i~~~~~~-g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~~~~ 98 (353)
T 2g8s_A 20 PWALAFLPDNHGMLITLRGGELRHWQAG-KGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDGKAGT 98 (353)
T ss_dssp EEEEEECSTTCCEEEEETTTEEEEEETT-TEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSSCEEE
T ss_pred cEEEEEcCCCCEEEEEeCCceEEEEeCC-CceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCCCcee
Confidence 45788999 67 7777778999999853 33221 1111 12346789999996 44444442 2 23
Q ss_pred cEEEEECCCC----eeeE-EecC------CCccEEEEEeeC-CEEEEEeCC--------------CcEEEEECCCCC---
Q 014934 231 KVQIWDASRC----KRVR-TMEG------HRLRVGALAWSS-SLLSSGSRD--------------KSILQRDIRAQE--- 281 (415)
Q Consensus 231 ~V~iwd~~~~----~~~~-~l~~------h~~~V~~l~~~~-~~l~sgs~d--------------g~I~iwd~~~~~--- 281 (415)
.|..|+.... .... .+.. .......|+|.+ ..|+.+..| |.|.-+|....-
T Consensus 99 ~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~~dG~~p~~ 178 (353)
T 2g8s_A 99 AVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIALGENNQRPTAQDLDKLQGKLVRLTDQGEIPDD 178 (353)
T ss_dssp EEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEECCTTCGGGGGCTTSCTTEEEEEETTSCCCTT
T ss_pred EEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEEECCCCCCCccCCCCCCCeEEEEECCCCCCCCC
Confidence 5666666432 1111 1111 111235688873 344444322 467777765420
Q ss_pred ---------ccEEEeccccCCeEEEEEeC-CCCEEEEEeC-CC--cEEEEE--------CCC------------------
Q 014934 282 ---------DFVSKLSGHKSEVCGLKWSY-DNRELASGGN-DN--RLFVWN--------QHS------------------ 322 (415)
Q Consensus 282 ---------~~~~~~~~h~~~V~~l~~sp-dg~~lasg~~-dg--~I~iwd--------~~~------------------ 322 (415)
.....-.+| ....+++|+| +|+++++-.. ++ .|.+.. ...
T Consensus 179 npf~~~~~~~~~i~a~G~-rnp~gl~~d~~~g~l~~~d~g~~~~dei~~i~~G~nyGwp~~~~~~~~~~~~~~~~~~~~~ 257 (353)
T 2g8s_A 179 NPFIKESGVRAEIWSYGI-RNPQGMAMNPWSNALWLNEHGPRGGDEINIPQKGKNYGWPLATWGINYSGFKIPEAKGEIV 257 (353)
T ss_dssp CTTTTSTTSCTTEEEECC-SEEEEEEEETTTTEEEEEEECSBSCEEEECCCTTCBCCTTTBCSSBCTTSSCCTTCCBSSC
T ss_pred CCCcCCCCCCccEEEEcC-cCccceEEECCCCCEEEEecCCCCCcEEeEeccCCcCCCCCccCCCCCCCCccCcccCCCC
Confidence 111112234 3477899999 5655554221 11 222211 000
Q ss_pred ---CceeEEeccCCCcEEEEEEcCCC------CcEEEEEcCCCCCeEEEEECCCCcEEEEee----CCCCEEEEEECCCC
Q 014934 323 ---TQPVLKYCEHTAAVKAIAWSPHL------HGLLASGGGTADRCIRFWNTTTNTHLSCMD----TGSQVCNLVWSKNV 389 (415)
Q Consensus 323 ---~~~~~~~~~h~~~V~~l~~sp~~------~~llasggg~~d~~I~iwd~~t~~~~~~~~----~~~~V~~l~~s~~~ 389 (415)
..++..+. +..++..++|.... ..++++.- ..+.|...++..++.+.... ....+..+++.|+|
T Consensus 258 ~~~~~P~~~~~-~~~ap~G~~~y~g~~fp~~~g~l~v~~~--~~~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~~pdG 334 (353)
T 2g8s_A 258 AGTEQPVFYWK-DSPAVSGMAFYNSDKFPQWQQKLFIGAL--KDKDVIVMSVNGDKVTEDGRILTDRGQRIRDVRTGPDG 334 (353)
T ss_dssp TTSCCCSEEES-SCCCEEEEEEECCSSSGGGTTEEEEEET--TTTEEEEEEEETTEEEEEEEESGGGCCCEEEEEECTTS
T ss_pred CCccCCeEEeC-CCcCcceeEEECCccCcccCCcEEEEEc--cCCEEEEEEeCCCeEeeeEEcccCCCCceeEEEECCCC
Confidence 12333443 33467788886421 23555543 57888888887665443321 24579999999999
Q ss_pred CeEEEE
Q 014934 390 NELVST 395 (415)
Q Consensus 390 ~~l~s~ 395 (415)
..++++
T Consensus 335 ~lyv~t 340 (353)
T 2g8s_A 335 YLYVLT 340 (353)
T ss_dssp CEEEEE
T ss_pred cEEEEE
Confidence 977653
No 343
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=93.25 E-value=3.6 Score=35.97 Aligned_cols=140 Identities=11% Similarity=0.046 Sum_probs=80.1
Q ss_pred eeEeecCC-CcEEEEEcCCeEEEEECCCCCe-------EEeEecCCCCCeEEEEEcCCCCeEEEEECCCcEEEEECCCCe
Q 014934 170 LNLVDWSS-HNVLAVGLGNCVYLWNACSSKV-------TKLCDLGIDDSVCSVGWANRNTHLAVGTSHGKVQIWDASRCK 241 (415)
Q Consensus 170 i~~l~ws~-~~~la~~~d~~V~iwd~~~~~~-------~~~~~~~~~~~V~~v~~sp~g~~la~g~~dg~V~iwd~~~~~ 241 (415)
+..++++| +.+.++ .++.++-.+..++.. .++-..+-. ...++.|.++|.+.++ .||.|.-++..+..
T Consensus 43 ~~~laf~P~G~LYaV-~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~-~F~a~~fD~~G~LYav--~dG~iyr~~pP~~~ 118 (236)
T 1tl2_A 43 FKFLFLSPGGELYGV-LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWN-QFQFLFFDPNGYLYAV--SKDKLYKASPPQSD 118 (236)
T ss_dssp CSEEEECTTSCEEEE-ETTEEEEESCCCSTTCCHHHHCEEEECSCGG-GCSEEEECTTSCEEEE--ETTEEEEESCCCST
T ss_pred ceeEEECCCccEEEE-eCCeEEEECCCCCCcccccccccEecccccc-cceEEEECCCCCEEEe--CCCEEEEeCCCcCC
Confidence 44889999 666666 788888887755322 222111111 2578899999998887 56999888763321
Q ss_pred ee------EEe-cCCCccEEEEEeeC-CEEEEEeCCCcEEEEECCCCC------ccEEEeccccCCeEEEEEeCCCCEEE
Q 014934 242 RV------RTM-EGHRLRVGALAWSS-SLLSSGSRDKSILQRDIRAQE------DFVSKLSGHKSEVCGLKWSYDNRELA 307 (415)
Q Consensus 242 ~~------~~l-~~h~~~V~~l~~~~-~~l~sgs~dg~I~iwd~~~~~------~~~~~~~~h~~~V~~l~~spdg~~la 307 (415)
.. ..+ ..-=..+..|.+.+ ..|.+.. |+.++-+...... .....-...-..-.-+.|.+++.+++
T Consensus 119 ~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~-dg~lyr~~~P~~~~~~wl~~~~~~g~~g~~~yr~l~f~~~G~l~~ 197 (236)
T 1tl2_A 119 TDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH-GQQFYKALPPVSNQDNWLARATKIGQGGWDTFKFLFFSSVGTLFG 197 (236)
T ss_dssp TCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE-TTEEEEECCCSSTTCCHHHHCEEEESSSGGGEEEEEECTTSCEEE
T ss_pred CCceeccccEeccCCCCceEEEEECCCceEEEEe-CCcEEecCCCCCCCcccccccceeccCCcceEEEEEECCCCcEEE
Confidence 11 111 11224678888884 4566666 8876543322111 00111112222344567889988877
Q ss_pred EEeCCCcEE
Q 014934 308 SGGNDNRLF 316 (415)
Q Consensus 308 sg~~dg~I~ 316 (415)
+. ++.++
T Consensus 198 v~--~g~~Y 204 (236)
T 1tl2_A 198 VQ--GGKFY 204 (236)
T ss_dssp EE--TTEEE
T ss_pred Ee--CCeEE
Confidence 76 67544
No 344
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=92.89 E-value=5.2 Score=36.12 Aligned_cols=221 Identities=16% Similarity=0.150 Sum_probs=115.1
Q ss_pred eeEeecCCCcEEEEEcCCeEEEEECCCCCeEEeEecCCCCCeEEEEEcCCCCeEEEEECCCcEEEEECCCCeeeEEecCC
Q 014934 170 LNLVDWSSHNVLAVGLGNCVYLWNACSSKVTKLCDLGIDDSVCSVGWANRNTHLAVGTSHGKVQIWDASRCKRVRTMEGH 249 (415)
Q Consensus 170 i~~l~ws~~~~la~~~d~~V~iwd~~~~~~~~~~~~~~~~~V~~v~~sp~g~~la~g~~dg~V~iwd~~~~~~~~~l~~h 249 (415)
|..++-.....++.. ++.|+.|-....-...+- ......|..|+....- .++. . ||.|..|-......+..-..-
T Consensus 26 i~~ia~G~~h~~~l~-~G~v~~wG~n~~Gqlg~p-~~~~~~i~~ia~G~~h-s~~l-~-~G~v~~wG~n~~Gqlg~P~~~ 100 (282)
T 3qhy_B 26 VDAIAGGYFHGLALK-GGKVLGWGANLNGQLTMP-AATQSGVDAIAAGNYH-SLAL-K-DGEVIAWGGNEDGQTTVPAEA 100 (282)
T ss_dssp CCEEEECSSEEEEEE-TTEEEEEECCSSSTTSCC-GGGGSCCCEEEECSSE-EEEE-E-TTEEEEEECCTTSTTCCCGGG
T ss_pred CcEEEeCCCeEEEEE-CCEEEEEeCCCCCCCCCC-ccCCCCEEEEEeCCCE-EEEE-E-CCEEEEeeCCCCCCCCCCccc
Confidence 334454555666666 999999976542211111 0112356666654332 2333 4 899999976543222111111
Q ss_pred CccEEEEEeeCCEEEEEeCCCcEEEEECCCCCccEEEeccccCCeEEEEEeCCCCEEEEEeCCCcEEEEECCCCceeEEe
Q 014934 250 RLRVGALAWSSSLLSSGSRDKSILQRDIRAQEDFVSKLSGHKSEVCGLKWSYDNRELASGGNDNRLFVWNQHSTQPVLKY 329 (415)
Q Consensus 250 ~~~V~~l~~~~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~spdg~~lasg~~dg~I~iwd~~~~~~~~~~ 329 (415)
...|..++......+.-. ||.|+.|-.....+.- ........|..++...+. .++ -. ||.|+.|-....-.+-.-
T Consensus 101 ~~~v~~ia~G~~hs~al~-~G~v~~wG~n~~gqlg-~~~~~~~~i~~i~~G~~~-~~~-l~-~G~v~~wG~n~~gqlg~p 175 (282)
T 3qhy_B 101 RSGVDAIAAGAWASYALK-DGKVIAWGDDSDGQTT-VPAEAQSGVTALDGGVYT-ALA-VK-NGGVIAWGDNYFGQTTVP 175 (282)
T ss_dssp SSSEEEEEEETTEEEEEE-TTEEEEEECCTTSTTS-CCGGGGSSEEEEEECSSE-EEE-EE-TTEEEEEECCTTSTTSCC
T ss_pred CCCeEEEECcCCEEEEEe-CCeEEEecCCCCCcCC-CCccCCCCeEEEEcccCE-EEE-EE-CCEEEEecCCCCCCCCCc
Confidence 346888888776666666 9999999876543221 111123457666654332 222 33 788999976542111110
Q ss_pred ccCCCcEEEEEEcCCCCcEEEEEcCCCCCeEEEEECCCC-cEEEEeeCCCCEEEEEECCCCCeEEEEEecCCCcEEEEEC
Q 014934 330 CEHTAAVKAIAWSPHLHGLLASGGGTADRCIRFWNTTTN-THLSCMDTGSQVCNLVWSKNVNELVSTHGYSQNQIIVWRY 408 (415)
Q Consensus 330 ~~h~~~V~~l~~sp~~~~llasggg~~d~~I~iwd~~t~-~~~~~~~~~~~V~~l~~s~~~~~l~s~~g~~dg~I~vw~~ 408 (415)
..-...|..|+.-.. +.++. . |+.|..|-.... ++-........|..++-.... .++. . ||.|..|-.
T Consensus 176 ~~~~~~v~~i~~G~~--hs~al-~---~G~v~~wG~n~~gqlg~p~~~~~~v~~i~~G~~h-~~al---~-~g~v~~wG~ 244 (282)
T 3qhy_B 176 AEAQSGVDDVAGGIF--HSLAL-K---DGKVIAWGDNRYKQTTVPTEALSGVSAIASGEWY-SLAL---K-NGKVIAWGS 244 (282)
T ss_dssp GGGGSSEEEEEECSS--EEEEE-E---TTEEEEEECCTTSTTCCCGGGGSSCCEEEECSSC-EEEE---E-TTEEEEEST
T ss_pred eecCCCeEEEEecCC--EEEEE-E---CCeEEEEECCCCCCCCCCcccCCCceEEEcCCCE-EEEE---E-CCEEEEecC
Confidence 112345777766543 23333 3 788888876542 211111122345555544332 2333 2 778888866
Q ss_pred CCC
Q 014934 409 PTM 411 (415)
Q Consensus 409 ~s~ 411 (415)
...
T Consensus 245 n~~ 247 (282)
T 3qhy_B 245 SRT 247 (282)
T ss_dssp TCC
T ss_pred CCC
Confidence 544
No 345
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=92.47 E-value=3.4 Score=38.75 Aligned_cols=109 Identities=12% Similarity=0.015 Sum_probs=67.4
Q ss_pred eccccCCeEEEEEeCCCCEEEEEeCCCcEEEEECCCCce--eEEe----ccCCCcEEEEEEcCC---CCcEEEEEcCCCC
Q 014934 287 LSGHKSEVCGLKWSYDNRELASGGNDNRLFVWNQHSTQP--VLKY----CEHTAAVKAIAWSPH---LHGLLASGGGTAD 357 (415)
Q Consensus 287 ~~~h~~~V~~l~~spdg~~lasg~~dg~I~iwd~~~~~~--~~~~----~~h~~~V~~l~~sp~---~~~llasggg~~d 357 (415)
+...-....+|+|.|||++|++--..|.|++++..+++. +..+ .........|+++|+ +..|+++-+...+
T Consensus 27 va~gL~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~ 106 (347)
T 3das_A 27 VATGLNSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASD 106 (347)
T ss_dssp EECCCSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSS
T ss_pred eecCCCCceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCC
Confidence 333345678999999999887776689999998766543 2222 123567899999996 4456665321134
Q ss_pred CeEEEEECCCC----------cEE-EEee--CCCCEEEEEECCCCCeEEEE
Q 014934 358 RCIRFWNTTTN----------THL-SCMD--TGSQVCNLVWSKNVNELVST 395 (415)
Q Consensus 358 ~~I~iwd~~t~----------~~~-~~~~--~~~~V~~l~~s~~~~~l~s~ 395 (415)
..|.-|....+ +.+ ..+. .......|.|.|+|...++.
T Consensus 107 ~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~ 157 (347)
T 3das_A 107 NRIVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGT 157 (347)
T ss_dssp EEEEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEEC
T ss_pred CEEEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEE
Confidence 56666665441 111 1222 12234569999999766553
No 346
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=91.78 E-value=1.1 Score=44.63 Aligned_cols=120 Identities=14% Similarity=0.003 Sum_probs=83.9
Q ss_pred cEEEEECCC----CCccEEEeccccCCeEEEEEeCCCCEEEEEe-CCCcEEEEECCCC------ce-------eEEeccC
Q 014934 271 SILQRDIRA----QEDFVSKLSGHKSEVCGLKWSYDNRELASGG-NDNRLFVWNQHST------QP-------VLKYCEH 332 (415)
Q Consensus 271 ~I~iwd~~~----~~~~~~~~~~h~~~V~~l~~spdg~~lasg~-~dg~I~iwd~~~~------~~-------~~~~~~h 332 (415)
.+.+.|.+. .......+ .-.....++..+|||++++.++ .+.++.|+|++.- +. +.+. .-
T Consensus 299 gv~ViD~~~~~~~~~~~~~~i-P~pksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~-e~ 376 (638)
T 3sbq_A 299 KTPVLDGRKKDGKDSKFTRYV-PVPKNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEP-EL 376 (638)
T ss_dssp CCCEEECSCBTTBCCSSEEEE-EESSSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECC-BC
T ss_pred CeeEEccccccccCCceEEEE-eCCCCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeec-cC
Confidence 367777766 33233333 2334566789999999987765 5789999998731 11 2222 22
Q ss_pred CCcEEEEEEcCCCCcEEEEEcCCCCCeEEEEECCCC----------cEEEEeeCCCCEEEEEE------CCCCCeEEEE
Q 014934 333 TAAVKAIAWSPHLHGLLASGGGTADRCIRFWNTTTN----------THLSCMDTGSQVCNLVW------SKNVNELVST 395 (415)
Q Consensus 333 ~~~V~~l~~sp~~~~llasggg~~d~~I~iwd~~t~----------~~~~~~~~~~~V~~l~~------s~~~~~l~s~ 395 (415)
.-.....+|.++| +.+.+-- .|..|..||+... ..+..++...++-.+.- .++|++|++.
T Consensus 377 GlGPlHt~Fd~~G-~aYTtlf--idSqvvkWni~~a~~~~~g~~~~~v~~k~dv~YqpGH~~~~~get~~~dGk~lv~l 452 (638)
T 3sbq_A 377 GLGPLHTTFDGRG-NAYTTLF--IDSQVVKWNMEEAVRAYKGEKVNYIKQKLDVHYQPGHLHASLCETNEADGKWLVAL 452 (638)
T ss_dssp CSCEEEEEECSSS-EEEEEET--TTTEEEEEEHHHHHHHHTTCCCCCEEEEEECSSCEEEEEETTTTSTTCCSCEEEEE
T ss_pred CCcccEEEECCCC-ceEeeee--ecceEEEEeccHHHHHhcCccCCeeeeccccccCCcccccCCCccCCCCccEEEEe
Confidence 3456778999998 5777765 8999999999753 56778888888877766 6789999884
No 347
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=91.50 E-value=9 Score=35.79 Aligned_cols=143 Identities=15% Similarity=0.204 Sum_probs=84.5
Q ss_pred CCCeEEEEEcCCCCeEEEEECCCcEEEEECCCCee--eEEec----CCCccEEEEEeeC-----CEEEEE---eCCCcEE
Q 014934 208 DDSVCSVGWANRNTHLAVGTSHGKVQIWDASRCKR--VRTME----GHRLRVGALAWSS-----SLLSSG---SRDKSIL 273 (415)
Q Consensus 208 ~~~V~~v~~sp~g~~la~g~~dg~V~iwd~~~~~~--~~~l~----~h~~~V~~l~~~~-----~~l~sg---s~dg~I~ 273 (415)
-.....|+|.|+|.++++--..|.|.+++...++. +..+. ........|++++ ..|+.. ..++.|.
T Consensus 31 L~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~~~v~ 110 (347)
T 3das_A 31 LNSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASDNRIV 110 (347)
T ss_dssp CSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSSEEEE
T ss_pred CCCceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCCCEEE
Confidence 35678999999998766644489999998765543 22221 2356688999975 344433 2455676
Q ss_pred EEECCCC----------CccEEEec-cccCCeEEEEEeCCCCEEEEEeC-------------CCcEEEEECCCC------
Q 014934 274 QRDIRAQ----------EDFVSKLS-GHKSEVCGLKWSYDNRELASGGN-------------DNRLFVWNQHST------ 323 (415)
Q Consensus 274 iwd~~~~----------~~~~~~~~-~h~~~V~~l~~spdg~~lasg~~-------------dg~I~iwd~~~~------ 323 (415)
-|..... +..+..+. .....-..|.|.|||.++++.+. .|.|.-.+....
T Consensus 111 R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~dG~ip~~nP 190 (347)
T 3das_A 111 RMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTGESGDTGLSQDRKSLGGKILRMTPDGEPAPGNP 190 (347)
T ss_dssp EEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECBCTTCGGGTTCTTCSTTCEEEECTTSSBCTTCS
T ss_pred EEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEECCCCCCccccCCCCCCCEEEEEeCCCCccCCCC
Confidence 6766541 11111121 11123567999999988877542 345555555422
Q ss_pred ---ceeEEeccCCCcEEEEEEcCCCCcEEEEEc
Q 014934 324 ---QPVLKYCEHTAAVKAIAWSPHLHGLLASGG 353 (415)
Q Consensus 324 ---~~~~~~~~h~~~V~~l~~sp~~~~llasgg 353 (415)
..+... +|. ....++|+|++. |+++-.
T Consensus 191 f~~~~i~a~-G~R-Np~Gla~dp~G~-L~~~d~ 220 (347)
T 3das_A 191 FPGSPVYSY-GHR-NVQGLAWDDKQR-LFASEF 220 (347)
T ss_dssp STTCCEEEB-CCS-BCCEEEECTTCC-EEEEEC
T ss_pred CCCCeEEee-CCC-CcceEEECCCCC-EEEEec
Confidence 122222 554 356899999865 666553
No 348
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=89.30 E-value=17 Score=35.30 Aligned_cols=59 Identities=8% Similarity=0.121 Sum_probs=39.7
Q ss_pred ceeEeecCC-CcEEEEEcCC-eEEEEECCCCCeEEeEecC-------CCCCeEEEEEcCC---CCeEEEEE
Q 014934 169 YLNLVDWSS-HNVLAVGLGN-CVYLWNACSSKVTKLCDLG-------IDDSVCSVGWANR---NTHLAVGT 227 (415)
Q Consensus 169 ~i~~l~ws~-~~~la~~~d~-~V~iwd~~~~~~~~~~~~~-------~~~~V~~v~~sp~---g~~la~g~ 227 (415)
....|+|.| ++++++-..+ .|++++..+++...+..+. .......|+|+|+ +..|.++.
T Consensus 28 ~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~ 98 (454)
T 1cru_A 28 KPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISG 98 (454)
T ss_dssp SEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEE
T ss_pred CceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEE
Confidence 356889988 7777777654 7999987667665544332 2356789999995 55554443
No 349
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=88.74 E-value=0.85 Score=45.49 Aligned_cols=73 Identities=11% Similarity=0.103 Sum_probs=56.4
Q ss_pred CcEEEEEEcCCCCcEEEEEcCCCCCeEEEEECCC------Cc-------EEEEeeCCCCEEEEEECCCCCeEEEEEecCC
Q 014934 334 AAVKAIAWSPHLHGLLASGGGTADRCIRFWNTTT------NT-------HLSCMDTGSQVCNLVWSKNVNELVSTHGYSQ 400 (415)
Q Consensus 334 ~~V~~l~~sp~~~~llasggg~~d~~I~iwd~~t------~~-------~~~~~~~~~~V~~l~~s~~~~~l~s~~g~~d 400 (415)
.....+..+|+|++++++|. .+.++.++|+.. ++ ....+..+-.....+|.++|+ ..++ -+-|
T Consensus 323 ksPHGv~vsPDGkyi~v~GK--LsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~GlGPlHt~Fd~~G~-aYTt-lfid 398 (638)
T 3sbq_A 323 KNPHGCNTSSDGKYFIAAGK--LSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPELGLGPLHTTFDGRGN-AYTT-LFID 398 (638)
T ss_dssp SSCCCEEECTTSCEEEEECT--TSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBCCSCEEEEEECSSSE-EEEE-ETTT
T ss_pred CCCcceeeCCCCCEEEEcCC--CCCeEEEEEeehhhhhhhccccCcccceEeeccCCCcccEEEECCCCc-eEee-eeec
Confidence 34456889999998888876 899999999984 22 244556677889999999993 3333 6889
Q ss_pred CcEEEEECCC
Q 014934 401 NQIIVWRYPT 410 (415)
Q Consensus 401 g~I~vw~~~s 410 (415)
.+|.-|++..
T Consensus 399 SqvvkWni~~ 408 (638)
T 3sbq_A 399 SQVVKWNMEE 408 (638)
T ss_dssp TEEEEEEHHH
T ss_pred ceEEEEeccH
Confidence 9999999854
No 350
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=88.45 E-value=29 Score=37.09 Aligned_cols=79 Identities=14% Similarity=0.029 Sum_probs=51.7
Q ss_pred cEEEEEeeCCEEEEEeCCCcEEEEECCCCCc--------------cEEE-e-----cc---ccCCeEEEEEeCCCCEEEE
Q 014934 252 RVGALAWSSSLLSSGSRDKSILQRDIRAQED--------------FVSK-L-----SG---HKSEVCGLKWSYDNRELAS 308 (415)
Q Consensus 252 ~V~~l~~~~~~l~sgs~dg~I~iwd~~~~~~--------------~~~~-~-----~~---h~~~V~~l~~spdg~~las 308 (415)
+..-.+.+++.++++-.||.+...+-+.... .+.. + .. -...+.+++..++..++++
T Consensus 173 p~~l~av~~~~l~Vsl~dGgLlrl~r~~~~~~~~~~~f~~~s~~~sl~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~lft 252 (950)
T 4gq2_M 173 PDLMAAISTSEICVSFFNGGLTKIILNPKDASHYEQHIDDSSYLFSLKKYLSLQAFKADYRSPNTIISMIFLSTYNVLVM 252 (950)
T ss_dssp EEEEEECSSSEEEEEETTSCEEEEEEETTTTEEEEEEECCCCCCCBCC-------CCSSCCCTTCEEEEEEETTTTEEEE
T ss_pred ceEEEEEcCCeEEEEECCCCEEEEEecCCCCCcceeeecCCcHHHhhhhhcccccCCCCCCCcceEEEEeecCCCcEEEE
Confidence 4444455678888888888776543222110 0000 0 11 1124667778888899999
Q ss_pred EeCCCcEEEEECCCCceeEEec
Q 014934 309 GGNDNRLFVWNQHSTQPVLKYC 330 (415)
Q Consensus 309 g~~dg~I~iwd~~~~~~~~~~~ 330 (415)
-+.|++++||++.+++++.+..
T Consensus 253 l~~D~~LRiWsl~t~~~v~t~d 274 (950)
T 4gq2_M 253 LSLDYKLKVLDLSTNQCVETIE 274 (950)
T ss_dssp EETTCEEEEEETTTTEEEEEEE
T ss_pred EECCCEEEEEECCCCCeEeeec
Confidence 9999999999999998887753
No 351
>3kci_A Probable E3 ubiquitin-protein ligase HERC2; WD40, RCC1, structural genomics consortium, SGC, coiled coil, metal-binding, phosphoprotein; 1.80A {Homo sapiens}
Probab=83.66 E-value=29 Score=32.54 Aligned_cols=234 Identities=11% Similarity=0.107 Sum_probs=128.3
Q ss_pred eeEeecCCCcEEEEEcCCeEEEEECCCC-C--------e--EEeEecCCCCCeEEEEEcCCCCeEEEEECCCcEEEEECC
Q 014934 170 LNLVDWSSHNVLAVGLGNCVYLWNACSS-K--------V--TKLCDLGIDDSVCSVGWANRNTHLAVGTSHGKVQIWDAS 238 (415)
Q Consensus 170 i~~l~ws~~~~la~~~d~~V~iwd~~~~-~--------~--~~~~~~~~~~~V~~v~~sp~g~~la~g~~dg~V~iwd~~ 238 (415)
+..++-.....++...++.|+.|-.... + . ...+..-....+..++++....+.++-+.+|.|..|-..
T Consensus 55 i~~i~~G~~~~~~l~~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~~~~~~~~~v~i~~G~~h~~al~~~G~v~~wG~n 134 (389)
T 3kci_A 55 PVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEA 134 (389)
T ss_dssp EEEEEEETTEEEEEETTSCEEEEECCGGGTTSSSSSCCEEEEEECGGGTTSCEEEEEECTTCSEEEEEETTSCEEEEECC
T ss_pred eEEEEeCCCeEEEEcCCCcEEEEECCCCCCCCCCCcCCccCCEEcccccCCceeEEEECcCCCeEEEEcCCCCEEEEeCC
Confidence 3344444456777888999999964321 1 1 111111123345667777777777777899999999543
Q ss_pred CC-----------eeeEEecC-CCccEEEEEeeCCEEEEEeCCCcEEEEECCCCCc----------cEEEecc-ccCCeE
Q 014934 239 RC-----------KRVRTMEG-HRLRVGALAWSSSLLSSGSRDKSILQRDIRAQED----------FVSKLSG-HKSEVC 295 (415)
Q Consensus 239 ~~-----------~~~~~l~~-h~~~V~~l~~~~~~l~sgs~dg~I~iwd~~~~~~----------~~~~~~~-h~~~V~ 295 (415)
.. .....+.. ....|..|+......+.-..||.|+.|-.....+ ....+.. ....|.
T Consensus 135 ~~GqLG~g~~~~~~~p~~v~~l~~~~i~~va~G~~hs~alt~~G~v~~wG~n~~GqLG~~~~~~~~~p~~v~~~~~~~v~ 214 (389)
T 3kci_A 135 EDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV 214 (389)
T ss_dssp GGGTTCSSSCCCEEEEEECGGGTTSCEEEEEECSSEEEEEETTSCEEEEECCGGGTTCSSSCCCEEEEEECGGGTTSCEE
T ss_pred CCCcCCCCCCccCcCCeEecccCCCeEEEEEeCcCeEEEEeCCCeEEEeCCCCCCCcCCCCCcccccceEecccCCCeEE
Confidence 21 11112221 2236788887777777888999999997543110 0111111 123466
Q ss_pred EEEEeCCCCEEEEEeCCCcEEEEECCCC-c---------e-eEEecc-CCCcEEEEEEcCCCCcEEEEEcCCCCCeEEEE
Q 014934 296 GLKWSYDNRELASGGNDNRLFVWNQHST-Q---------P-VLKYCE-HTAAVKAIAWSPHLHGLLASGGGTADRCIRFW 363 (415)
Q Consensus 296 ~l~~spdg~~lasg~~dg~I~iwd~~~~-~---------~-~~~~~~-h~~~V~~l~~sp~~~~llasggg~~d~~I~iw 363 (415)
.++......+.+.-..||.|+.|-.... + . ...+.. ....|..|+.-.. +.++.. .|+.|..|
T Consensus 215 ~ia~G~g~~~t~~l~~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~~~~~~v~~v~~G~~--hs~alt---~~G~v~~w 289 (389)
T 3kci_A 215 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQ--FSVALT---KSGAVYTW 289 (389)
T ss_dssp EEEECCSSCEEEEEETTTEEEEEECCGGGTTSSSSCCCEEEEEECGGGTTSCEEEEEEETT--EEEEEE---TTSCEEEE
T ss_pred EEEEcCCCcEEEEEccCCEEEEEeCCCCCCCCCCCCCCccccEEecccCCCcEEEEeCCCC--EEEEEe---CCCeEEEE
Confidence 6665433356666778999999975421 0 1 111211 1224666665543 234433 58999999
Q ss_pred ECCCC-c----------EEEEee--CCCCEEEEEECCCCCeEEEEEecCCCcEEEEECCCCc
Q 014934 364 NTTTN-T----------HLSCMD--TGSQVCNLVWSKNVNELVSTHGYSQNQIIVWRYPTMS 412 (415)
Q Consensus 364 d~~t~-~----------~~~~~~--~~~~V~~l~~s~~~~~l~s~~g~~dg~I~vw~~~s~~ 412 (415)
-.... + ....+. .+..|..++...... ++. ..||.|+.|-....-
T Consensus 290 G~n~~GqLG~g~~~~~~~P~~v~~l~~~~v~~ia~G~~h~-~al---~~~G~v~~wG~n~~G 347 (389)
T 3kci_A 290 GKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHC-VCC---TEDGEVYTWGDNDEG 347 (389)
T ss_dssp ECCGGGTTCSSSCCCEEEEEECGGGTTCCEEEEEECSSEE-EEE---ETTCCEEEEECCTTS
T ss_pred eCCCCCCCCCCCCccccCCeEeccCCCCCEEEEEeccCeE-EEE---CCCCCEEEeeCCCCC
Confidence 76421 0 111111 234566666554432 222 368899999876543
No 352
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=83.51 E-value=29 Score=32.40 Aligned_cols=208 Identities=8% Similarity=-0.009 Sum_probs=100.7
Q ss_pred cEEEEEcCCeEEEEECCC--CCeEEeEecCCCCCeEEEEEcC-CCCeEEEEECCC----cEEEEECCCCeeeEEec----
Q 014934 179 NVLAVGLGNCVYLWNACS--SKVTKLCDLGIDDSVCSVGWAN-RNTHLAVGTSHG----KVQIWDASRCKRVRTME---- 247 (415)
Q Consensus 179 ~~la~~~d~~V~iwd~~~--~~~~~~~~~~~~~~V~~v~~sp-~g~~la~g~~dg----~V~iwd~~~~~~~~~l~---- 247 (415)
..|.++....+++++... ..............|.+|++.| +...|.+++..| .|...+ ..++....+.
T Consensus 23 g~l~vgt~~Gl~~~~~~~~g~~W~~~~~~~~~~~v~~i~~dp~~~~~l~~g~~~g~~g~gl~~s~-D~G~tW~~~~~~~~ 101 (394)
T 3b7f_A 23 VMLLVATIKGAWFLASDPARRTWELRGPVFLGHTIHHIVQDPREPERMLMAARTGHLGPTVFRSD-DGGGNWTEATRPPA 101 (394)
T ss_dssp CEEEEEETTEEEEEEECTTSCSEEEEEEESTTSEEEEEEECSSSTTCEEEEEEC--CCEEEEEES-STTSCCEECSBCCC
T ss_pred CEEEEEecCceEEEECCCCCCCceECCccCCCCceEEEEECCCCCCeEEEEecCCCCCccEEEeC-CCCCCceECCcccc
Confidence 345555455577776543 2333321112246799999998 334455555555 343332 2222222221
Q ss_pred --C--------CCccEEEEEee----CCEEEEEeCCCcEEEEECCCCCccEEEecc-------------------ccCCe
Q 014934 248 --G--------HRLRVGALAWS----SSLLSSGSRDKSILQRDIRAQEDFVSKLSG-------------------HKSEV 294 (415)
Q Consensus 248 --~--------h~~~V~~l~~~----~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~-------------------h~~~V 294 (415)
. ....|.+|++. ++.|..++..+.|...+-.... ...+.. ....|
T Consensus 102 ~~~~~~~~~~~~~~~i~~l~~~~~~~~~~l~~g~~~ggl~~S~DgG~t--W~~~~~~~~~p~~~~~~~~~~~g~~~~~~i 179 (394)
T 3b7f_A 102 FNKAPEGETGRVVDHVFWLTPGHASEPGTWYAGTSPQGLFRSTDHGAS--WEPVAGFNDHPMRRAWTGGEQDGTPDGPKM 179 (394)
T ss_dssp CCCCC----CCCCCEEEEEEECCTTSTTCEEEEEETTEEEEESSTTSB--CEECHHHHTCTTHHHHHCCC----CCCCEE
T ss_pred CCCcccccccccccceeEEEeCCCCCCCEEEEEecCCcEEEEcCCCCC--eEECcCccCCccccccccccccCCCCCCce
Confidence 1 11357788886 5677777766666655322221 122211 12357
Q ss_pred EEEEEeCC-CCEEEEEeCCCcEEEEECCCCceeEEecc-----C--------CCcEEEEEEcCCCCcEEEEEcCCCCCeE
Q 014934 295 CGLKWSYD-NRELASGGNDNRLFVWNQHSTQPVLKYCE-----H--------TAAVKAIAWSPHLHGLLASGGGTADRCI 360 (415)
Q Consensus 295 ~~l~~spd-g~~lasg~~dg~I~iwd~~~~~~~~~~~~-----h--------~~~V~~l~~sp~~~~llasggg~~d~~I 360 (415)
.+|.++|. ...|..+..++.|+..+- .++....+.. + ...+.+|++.|.....+..+. .+.|
T Consensus 180 ~~i~~d~~~~~~l~vg~~~ggl~~s~D-gG~tW~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l~vg~---~~gl 255 (394)
T 3b7f_A 180 HSILVDPRDPKHLYIGMSSGGVFESTD-AGTDWKPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQQN---HCGI 255 (394)
T ss_dssp EEEEECTTCTTCEEEEEETBEEEEESS-TTSSCEECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEEEEEE---TTEE
T ss_pred eEEEECCCCCCEEEEEECCCCEEEECC-CCCCceECCCCccccccCCCccccCcceeEEEECCCCCCEEEEEc---CCeE
Confidence 88999873 444555544454544332 2222222211 0 134889999997433444443 3334
Q ss_pred EEEECCCCcEEEEeeC---C---CCEEEEEECCC-CCeEEE
Q 014934 361 RFWNTTTNTHLSCMDT---G---SQVCNLVWSKN-VNELVS 394 (415)
Q Consensus 361 ~iwd~~t~~~~~~~~~---~---~~V~~l~~s~~-~~~l~s 394 (415)
...+ ..|+....+.. . ..+..+.++|. ...|.+
T Consensus 256 ~~s~-D~G~tW~~~~~~l~~~~~~~~~~i~~~p~~~~~l~~ 295 (394)
T 3b7f_A 256 YRMD-RREGVWKRIGDAMPREVGDIGFPIVVHQRDPRTVWV 295 (394)
T ss_dssp EEEE-TTTTEEECGGGGSCTTTCSCEEEEEECSSCTTCEEE
T ss_pred EEeC-CCCCcceECCCCCCCCCccceEEEEECCCCCCEEEE
Confidence 4433 23444433321 1 34567788763 333444
No 353
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=82.68 E-value=29 Score=33.72 Aligned_cols=106 Identities=11% Similarity=0.081 Sum_probs=62.3
Q ss_pred CCeEEEEEeCCCC-EEEEEeCCCcEEEEECCCC---ceeEEecc---------CCCcEEEEEEcCC---CCcEEEEEcCC
Q 014934 292 SEVCGLKWSYDNR-ELASGGNDNRLFVWNQHST---QPVLKYCE---------HTAAVKAIAWSPH---LHGLLASGGGT 355 (415)
Q Consensus 292 ~~V~~l~~spdg~-~lasg~~dg~I~iwd~~~~---~~~~~~~~---------h~~~V~~l~~sp~---~~~llasggg~ 355 (415)
..-..|+|.|||. .|+++...|.|++++.... ..+..+.. .......|+|+|+ ...++++-...
T Consensus 14 ~~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt~~ 93 (463)
T 2wg3_C 14 RQPVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYTTN 93 (463)
T ss_dssp SSEEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEEEC
T ss_pred CCceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEeCC
Confidence 4567899999996 4555567899999975432 23333221 1457889999996 33465553210
Q ss_pred CC----------CeEEEEECCC----------CcEEEEee---CCCCEEEEEECCCCCeEEEEEec
Q 014934 356 AD----------RCIRFWNTTT----------NTHLSCMD---TGSQVCNLVWSKNVNELVSTHGY 398 (415)
Q Consensus 356 ~d----------~~I~iwd~~t----------~~~~~~~~---~~~~V~~l~~s~~~~~l~s~~g~ 398 (415)
.+ ..|.-|.+.. .+.+..+. .......|.|.|||...+++ |.
T Consensus 94 ~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~LYv~~-Gd 158 (463)
T 2wg3_C 94 QERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGFLYIIL-GD 158 (463)
T ss_dssp CCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSCEEEEE-CC
T ss_pred CCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCcEEEEe-CC
Confidence 11 1344455532 12333332 23447789999999766654 53
No 354
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=81.84 E-value=15 Score=33.02 Aligned_cols=161 Identities=14% Similarity=0.111 Sum_probs=84.4
Q ss_pred eeEeecCCCcEEEEEcCCeEEEEECCCCCeEEeEecCCCCCeEEEEEcCCCCeEEEEECCCcEEEEECCCCeeeEEecCC
Q 014934 170 LNLVDWSSHNVLAVGLGNCVYLWNACSSKVTKLCDLGIDDSVCSVGWANRNTHLAVGTSHGKVQIWDASRCKRVRTMEGH 249 (415)
Q Consensus 170 i~~l~ws~~~~la~~~d~~V~iwd~~~~~~~~~~~~~~~~~V~~v~~sp~g~~la~g~~dg~V~iwd~~~~~~~~~l~~h 249 (415)
+..++-.....++.. ++.|+.|-........+. ......|..|+.... +.++-. +|.|..|-......+..-..-
T Consensus 104 v~~ia~G~~hs~al~-~G~v~~wG~n~~gqlg~~-~~~~~~i~~i~~G~~--~~~~l~-~G~v~~wG~n~~gqlg~p~~~ 178 (282)
T 3qhy_B 104 VDAIAAGAWASYALK-DGKVIAWGDDSDGQTTVP-AEAQSGVTALDGGVY--TALAVK-NGGVIAWGDNYFGQTTVPAEA 178 (282)
T ss_dssp EEEEEEETTEEEEEE-TTEEEEEECCTTSTTSCC-GGGGSSEEEEEECSS--EEEEEE-TTEEEEEECCTTSTTSCCGGG
T ss_pred eEEEECcCCEEEEEe-CCeEEEecCCCCCcCCCC-ccCCCCeEEEEcccC--EEEEEE-CCEEEEecCCCCCCCCCceec
Confidence 555666666777777 999999976542211111 012345666654332 222223 788888876442222111112
Q ss_pred CccEEEEEeeCCEEEEEeCCCcEEEEECCCCCccEEEeccccCCeEEEEEeCCCCEEEEEeCCCcEEEEECCCCceeEEe
Q 014934 250 RLRVGALAWSSSLLSSGSRDKSILQRDIRAQEDFVSKLSGHKSEVCGLKWSYDNRELASGGNDNRLFVWNQHSTQPVLKY 329 (415)
Q Consensus 250 ~~~V~~l~~~~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~spdg~~lasg~~dg~I~iwd~~~~~~~~~~ 329 (415)
...|..++......+.- .||.|+.|-.....+.- .-......|..++..... .+|.. ||.|+.|=.....++.
T Consensus 179 ~~~v~~i~~G~~hs~al-~~G~v~~wG~n~~gqlg-~p~~~~~~v~~i~~G~~h-~~al~--~g~v~~wG~n~~gq~~-- 251 (282)
T 3qhy_B 179 QSGVDDVAGGIFHSLAL-KDGKVIAWGDNRYKQTT-VPTEALSGVSAIASGEWY-SLALK--NGKVIAWGSSRTAPSS-- 251 (282)
T ss_dssp GSSEEEEEECSSEEEEE-ETTEEEEEECCTTSTTC-CCGGGGSSCCEEEECSSC-EEEEE--TTEEEEESTTCCCCGG--
T ss_pred CCCeEEEEecCCEEEEE-ECCeEEEEECCCCCCCC-CCcccCCCceEEEcCCCE-EEEEE--CCEEEEecCCCCcccc--
Confidence 34577777664444444 69999999765443221 111112356666654333 33333 8889988765543321
Q ss_pred ccCCCcEEEEEEcCC
Q 014934 330 CEHTAAVKAIAWSPH 344 (415)
Q Consensus 330 ~~h~~~V~~l~~sp~ 344 (415)
-...|..|+--..
T Consensus 252 --v~~~v~~iaaG~~ 264 (282)
T 3qhy_B 252 --VQSGVSSIEAGPN 264 (282)
T ss_dssp --GSSCEEEEEECSS
T ss_pred --CCCCcEEEEECcC
Confidence 1235666655544
No 355
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=81.77 E-value=32 Score=31.66 Aligned_cols=220 Identities=14% Similarity=0.056 Sum_probs=121.5
Q ss_pred CCcceeEeecCC-CcEEEEEcCCeEEEEEC---CCC----CeE---EeEecCCCCCeEEEEEcC---CCCeEEEEECCCc
Q 014934 166 DDFYLNLVDWSS-HNVLAVGLGNCVYLWNA---CSS----KVT---KLCDLGIDDSVCSVGWAN---RNTHLAVGTSHGK 231 (415)
Q Consensus 166 ~~~~i~~l~ws~-~~~la~~~d~~V~iwd~---~~~----~~~---~~~~~~~~~~V~~v~~sp---~g~~la~g~~dg~ 231 (415)
+|+....+.-+. +.+|.....|.+|-... ... .-. .++.+...+.|.++.... +..++++.+.+|.
T Consensus 41 ~D~~~~~~~~~t~d~ll~fT~~Gr~y~~~~~~lp~~~r~~~G~~i~~~l~l~~~e~i~~~~~~~~~~~e~~~v~~T~~G~ 120 (327)
T 3uc1_A 41 DDIVAHFFVCSTHDLILFFTTQGRVYRAKAYDLPEASRTARGQHVANLLAFQPEERIAQVIQIRGYTDAPYLVLATRNGL 120 (327)
T ss_dssp GGCEEEEEEEETTSEEEEEETTSEEEEEEGGGSCBCCSSSCCEEHHHHTTCCTTCCEEEEEEESSTTSSSEEEEEETTSE
T ss_pred CCEEEEEEEeCCCCEEEEEeCCCeEEEEEHHHCcCCCccCCCEEHHHccCCCCCCEEEEEEEeccCCCCCEEEEEcCCCE
Confidence 455555555555 66777888888776653 221 111 123334456677665443 5779999999999
Q ss_pred EEEEECCCC-------eeeEEecCCCccEEEEEee-CCEEEEEeCCCcEEEEECC--CCC---c---cEEEec-cccCCe
Q 014934 232 VQIWDASRC-------KRVRTMEGHRLRVGALAWS-SSLLSSGSRDKSILQRDIR--AQE---D---FVSKLS-GHKSEV 294 (415)
Q Consensus 232 V~iwd~~~~-------~~~~~l~~h~~~V~~l~~~-~~~l~sgs~dg~I~iwd~~--~~~---~---~~~~~~-~h~~~V 294 (415)
|+--.+... .....+.....-+.....+ .+.|+..+..|.++.+... .-. . =+..+. .....|
T Consensus 121 iKr~~l~~~~~~~r~G~~~i~lke~D~lv~~~~~~~~d~ill~T~~G~~~rf~~~~~eip~~gr~a~Gv~~i~L~~~d~V 200 (327)
T 3uc1_A 121 VKKSKLTDFDSNRSGGIVAVNLRDNDELVGAVLCSAGDDLLLVSANGQSIRFSATDEALRPMGRATSGVQGMRFNIDDRL 200 (327)
T ss_dssp EEEEEGGGGCCCCSSCEESCBCCTTCCEEEEEEECTTCEEEEEETTSEEEEEECCTTTSCCCCTTSBCEESSCCCTTCCE
T ss_pred EEEeEHHHhhccccCceEEEEECCCCEEEEEEEecCCCEEEEEECCCeEEEEECcccccCcCCcCCCCeeeecCCCCCEE
Confidence 999876432 2222334433334333333 4678888999998888766 211 0 011111 123457
Q ss_pred EEEEEeCCCCEEEEEeCCCcEEEEECCCC-------ceeE--EeccCCCcEEEEEEcCCCCcEEEEEcCCCCCeEEEEEC
Q 014934 295 CGLKWSYDNRELASGGNDNRLFVWNQHST-------QPVL--KYCEHTAAVKAIAWSPHLHGLLASGGGTADRCIRFWNT 365 (415)
Q Consensus 295 ~~l~~spdg~~lasg~~dg~I~iwd~~~~-------~~~~--~~~~h~~~V~~l~~sp~~~~llasggg~~d~~I~iwd~ 365 (415)
.++..-+++..|+..+..|.++.-.+..- +-+. .+..-.+.+..+........+++.. .+|.+.-++.
T Consensus 201 v~~~~~~~~~~ll~~T~~G~~Krt~l~e~~~~~R~~~G~~~~~l~~~~d~lv~~~~~~~~~~i~l~T---~~G~~ir~~~ 277 (327)
T 3uc1_A 201 LSLNVVREGTYLLVATSGGYAKRTAIEEYPVQGRGGKGVLTVMYDRRRGRLVGALIVDDDSELYAVT---SGGGVIRTAA 277 (327)
T ss_dssp EEEEECCTTCEEEEEETTSEEEEEEGGGSCBCCTTSCCEESSCCCTTTCSEEEEEEECTTCEEEEEE---GGGCEEEEEG
T ss_pred EEEEEECCCCEEEEEeCCCcEEEEEHHHccccCcCCCcEEEEEecCCCCeEEEEEEeCCCccEEEEc---CCCeEEEEeh
Confidence 77766666778999999999988775321 2222 2222234455544433333455544 3666666655
Q ss_pred CC---------CcEEEEeeCCCCEEEEEECCC
Q 014934 366 TT---------NTHLSCMDTGSQVCNLVWSKN 388 (415)
Q Consensus 366 ~t---------~~~~~~~~~~~~V~~l~~s~~ 388 (415)
.. |-.+-.+..+..|.++...+.
T Consensus 278 ~~i~~~gR~a~GV~~i~l~~~d~vv~~~~~~~ 309 (327)
T 3uc1_A 278 RQVRKAGRQTKGVRLMNLGEGDTLLAIARNAE 309 (327)
T ss_dssp GGSCBCCTTSCCEECTTCCTTCCEEEEEECC-
T ss_pred hhccccCCCCCCeEeEecCCCCEEEEEEEcCC
Confidence 32 111222234566766665543
No 356
>2rqw_B 24-meric peptide from serine/threonine-protein KI STE20; BEM1P, STE20P, SH3CI, PRR, cytoplasm, cytoskeleton, SH3 DOMA cycle; NMR {Saccharomyces cerevisiae}
Probab=81.35 E-value=0.73 Score=24.82 Aligned_cols=12 Identities=42% Similarity=0.803 Sum_probs=9.7
Q ss_pred CCCcccCCCCCC
Q 014934 45 YSDRFIPSRSSS 56 (415)
Q Consensus 45 ~~drfip~r~~~ 56 (415)
..++|||+|-+.
T Consensus 4 ~~eKFiPsRPAP 15 (26)
T 2rqw_B 4 ANGKFIPSRPAP 15 (26)
T ss_dssp CCCSSCCSSCCC
T ss_pred cccccccCCCCC
Confidence 458999999864
No 357
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=79.60 E-value=15 Score=40.28 Aligned_cols=37 Identities=16% Similarity=0.037 Sum_probs=31.1
Q ss_pred eEEEEEeCCCCEEEEEeCCCcEEEEECCCCceeEEec
Q 014934 294 VCGLKWSYDNRELASGGNDNRLFVWNQHSTQPVLKYC 330 (415)
Q Consensus 294 V~~l~~spdg~~lasg~~dg~I~iwd~~~~~~~~~~~ 330 (415)
+.+++..++..++++-+.|++++|||+.+++++.+..
T Consensus 240 ~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t~D 276 (1139)
T 4fhn_B 240 IISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE 276 (1139)
T ss_dssp BSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEEEEE
T ss_pred eEEeeccCCccEEEEEeCCCEEEEEECCCCCeEEeec
Confidence 4455667788999999999999999999999887753
No 358
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=77.34 E-value=54 Score=31.72 Aligned_cols=103 Identities=12% Similarity=0.097 Sum_probs=60.9
Q ss_pred CCeEEEEEcCCCC-eEEEEECCCcEEEEECCCC---eeeEEec---------CCCccEEEEEeeCC-----EEEEE-eC-
Q 014934 209 DSVCSVGWANRNT-HLAVGTSHGKVQIWDASRC---KRVRTME---------GHRLRVGALAWSSS-----LLSSG-SR- 268 (415)
Q Consensus 209 ~~V~~v~~sp~g~-~la~g~~dg~V~iwd~~~~---~~~~~l~---------~h~~~V~~l~~~~~-----~l~sg-s~- 268 (415)
.....|+|.|+|. .|+++...|.|++++.... ..+..+. ........|+++++ .|... +.
T Consensus 14 ~~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt~~ 93 (463)
T 2wg3_C 14 RQPVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYTTN 93 (463)
T ss_dssp SSEEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEEEC
T ss_pred CCceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEeCC
Confidence 4678999999996 6667788999999975422 1222222 11456888999864 33332 21
Q ss_pred -C----------CcEEEEECCCC---------CccEEEec--cccCCeEEEEEeCCCCEEEEEeC
Q 014934 269 -D----------KSILQRDIRAQ---------EDFVSKLS--GHKSEVCGLKWSYDNRELASGGN 311 (415)
Q Consensus 269 -d----------g~I~iwd~~~~---------~~~~~~~~--~h~~~V~~l~~spdg~~lasg~~ 311 (415)
+ ..|.-|.+... .+.+..+. ........|+|.|||.+.++.+.
T Consensus 94 ~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~LYv~~Gd 158 (463)
T 2wg3_C 94 QERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGFLYIILGD 158 (463)
T ss_dssp CCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSCEEEEECC
T ss_pred CCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCcEEEEeCC
Confidence 1 13555655421 11122221 11234678999999988877654
No 359
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=73.78 E-value=99 Score=32.98 Aligned_cols=38 Identities=11% Similarity=0.223 Sum_probs=31.0
Q ss_pred cEEEEEEcCCCCcEEEEEcCCCCCeEEEEECCCCcEEEEee
Q 014934 335 AVKAIAWSPHLHGLLASGGGTADRCIRFWNTTTNTHLSCMD 375 (415)
Q Consensus 335 ~V~~l~~sp~~~~llasggg~~d~~I~iwd~~t~~~~~~~~ 375 (415)
.+.+++..++...+++.+ .|+++|+||+.+++++.+.+
T Consensus 237 ~~~~~~~~~~~~~lftl~---~D~~LRiWsl~t~~~v~t~d 274 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLS---LDYKLKVLDLSTNQCVETIE 274 (950)
T ss_dssp CEEEEEEETTTTEEEEEE---TTCEEEEEETTTTEEEEEEE
T ss_pred eEEEEeecCCCcEEEEEE---CCCEEEEEECCCCCeEeeec
Confidence 467778888777566655 79999999999999998875
No 360
>1zi0_A DNA gyrase subunit A; beta pinwheel, topoisomerase, spiralling beta pinwheel, DNA wrapping, isomerase, DNA bindng protein; HET: DNA; 2.60A {Escherichia coli}
Probab=72.76 E-value=55 Score=29.64 Aligned_cols=155 Identities=12% Similarity=0.077 Sum_probs=91.0
Q ss_pred CCcceeEeecCC-CcEEEEEcCCeEEEEECCC---------CCe-EEeEecCCCCCeEEEEEc---CCCCeEEEEECCCc
Q 014934 166 DDFYLNLVDWSS-HNVLAVGLGNCVYLWNACS---------SKV-TKLCDLGIDDSVCSVGWA---NRNTHLAVGTSHGK 231 (415)
Q Consensus 166 ~~~~i~~l~ws~-~~~la~~~d~~V~iwd~~~---------~~~-~~~~~~~~~~~V~~v~~s---p~g~~la~g~~dg~ 231 (415)
+|+.+..+.-+. +.++.+...|.++-+.... |.. ...+.+...+.|.++... .++.+++..+.+|.
T Consensus 41 ~D~l~~~~~~~~~~~ll~fT~~G~~~~~~~~elp~~~~~a~G~~i~~~l~l~~~e~i~~~~~~~~~~~~~~ll~~T~~G~ 120 (307)
T 1zi0_A 41 EDFIDRLLVANTHDHILCFSSRGRVYSMKVYQLPEATRGARGRPIVNLLPLEQDERITAILPVTEFEEGVKVFMATANGT 120 (307)
T ss_dssp -CCEEEEEEEETTCEEEEEETTSEEEEEEGGGSCCCCSSSCCEEGGGTSCCCTTCCEEEEEEESCCCTTCEEEEEETTSE
T ss_pred CCEEEEEEEECCCCEEEEEECCCEEEEEEhhHCcCCCCCCCCeEhhhccCCCCCCEEEEEEEeccCCCCcEEEEEeCCCe
Confidence 455555554444 7788888888877766421 111 122234455667776543 35667888999999
Q ss_pred EEEEECCC-------CeeeEEecCCCccEEEEEe-e-CCEEEEEeCCCcEEEEECCCCC------ccEEEec-cccCCeE
Q 014934 232 VQIWDASR-------CKRVRTMEGHRLRVGALAW-S-SSLLSSGSRDKSILQRDIRAQE------DFVSKLS-GHKSEVC 295 (415)
Q Consensus 232 V~iwd~~~-------~~~~~~l~~h~~~V~~l~~-~-~~~l~sgs~dg~I~iwd~~~~~------~~~~~~~-~h~~~V~ 295 (415)
++--.+.. +.....+..+ ..+..+.. + .+.++..+.+|.+..+....-. .-+..+. .....|.
T Consensus 121 ~Krt~l~e~~~~~r~G~~~i~l~~~-d~lv~~~~~~~~~~i~l~T~~G~~irf~~~~v~~~gr~a~Gv~~i~L~~~d~Vv 199 (307)
T 1zi0_A 121 VKKTVLTEFNRLRTAGKVAIKLVDG-DELIGVDLTSGEDEVMLFSAEGKVVRFKESSVRAMGCNTTGVRGIRLGEGDKVV 199 (307)
T ss_dssp EEEEEGGGGTTCCTTCEESSCCCTT-CCEEEEEEECTTCEEEEEETTSEEEEEEGGGSCBCCTTCCCEECCCCCTTCCEE
T ss_pred EEEEEHHHhhccccCCeEEEEECCC-CEEEEEEEeCCCCEEEEECCCCcEEEEEHHHcCccCCCCCCeEeEEeCCCCEEE
Confidence 99987642 2122223334 34444333 3 4678888999998888764211 0011111 1234566
Q ss_pred EEEEeCCCCEEEEEeCCCcEEEEECC
Q 014934 296 GLKWSYDNRELASGGNDNRLFVWNQH 321 (415)
Q Consensus 296 ~l~~spdg~~lasg~~dg~I~iwd~~ 321 (415)
++..-.++..|++.+..|.++-.++.
T Consensus 200 ~~~~~~~~~~ll~~T~~G~~Kr~~~~ 225 (307)
T 1zi0_A 200 SLIVPRGDGAILTATQNGYGKRTAVA 225 (307)
T ss_dssp EEECCCSSCEEEEEETTSEEEEECGG
T ss_pred EEEEecCCCEEEEEEcCCceEEEEHH
Confidence 66555556678888889988887763
No 361
>1suu_A DNA gyrase subunit A; topoisomerase,DNA gyrase, beta-propeller, beta-pinwheel, ISO; HET: DNA; 1.75A {Borrelia burgdorferi} SCOP: b.68.10.1
Probab=71.06 E-value=61 Score=29.42 Aligned_cols=155 Identities=14% Similarity=0.090 Sum_probs=93.6
Q ss_pred CCcceeEeecCC-CcEEEEEcCCeEEEEECCCC---------C-eEEeEecCCCCCeEEEEEcC---CCCeEEEEECCCc
Q 014934 166 DDFYLNLVDWSS-HNVLAVGLGNCVYLWNACSS---------K-VTKLCDLGIDDSVCSVGWAN---RNTHLAVGTSHGK 231 (415)
Q Consensus 166 ~~~~i~~l~ws~-~~~la~~~d~~V~iwd~~~~---------~-~~~~~~~~~~~~V~~v~~sp---~g~~la~g~~dg~ 231 (415)
+|+.+..+.-+. +.++.++..|.++-.....- . +...+.+...+.|.++...+ +..+|+..+..|.
T Consensus 46 ~D~l~~~~~~~~~~~ll~~T~~G~~~~~~~~~ip~~~r~~~G~~i~~~l~l~~~e~i~~~~~~~~~~~~~~ll~~T~~G~ 125 (312)
T 1suu_A 46 GDEIVIALCVNTHDYLFMISNEGKLYLINAYEIKDSSRASKGQNISELINLGDQEEILTIKNSKDLTDDAYLLLTTASGK 125 (312)
T ss_dssp TCCEEEEEEEETTCEEEEEETTSEEEEEEGGGSCC-------CBGGGTSCCCTTCCEEEEEEESCCCTTCEEEEEETTSE
T ss_pred CCEEEEEEEECCCCEEEEEECCCeEEEEEHHHCCCCCccCCCcChhhccCCCCCCEEEEEEEeccCCCCCEEEEEeCCCe
Confidence 455555555555 66777788888877765321 1 11123334456676665443 4677888999999
Q ss_pred EEEEECCC-------CeeeEEecCCCccEEEEEe-e-CCEEEEEeCCCcEEEEECCCCC------ccEEEec-cccCCeE
Q 014934 232 VQIWDASR-------CKRVRTMEGHRLRVGALAW-S-SSLLSSGSRDKSILQRDIRAQE------DFVSKLS-GHKSEVC 295 (415)
Q Consensus 232 V~iwd~~~-------~~~~~~l~~h~~~V~~l~~-~-~~~l~sgs~dg~I~iwd~~~~~------~~~~~~~-~h~~~V~ 295 (415)
++...+.. +.....+.. ...+..+.. . .+.++..+.+|.+..+....-. .=+..+. .....|.
T Consensus 126 ~kr~~l~~~~~~r~~G~~~i~L~~-~d~lv~~~~~~~~~~i~l~T~~G~~~r~~~~ev~~~gR~~~Gv~~i~L~~~d~vv 204 (312)
T 1suu_A 126 IARFESTDFKAVKSRGVIVIKLND-KDFVTSAEIVFKDEKVICLSKKGSAFIFNSRDVRLTNRGTQGVCGMKLKEGDLFV 204 (312)
T ss_dssp EEEEEGGGGCC----CEECBCCCT-TCCEEEEEEECTTCEEEEEETTSEEEEEEGGGSCBCCTTBCCEECCCCCTTCCEE
T ss_pred EEEEEHHHhhccCCCcEEEEecCC-CCEEEEEEEeCCCCEEEEEeCCCcEEEEEHHHccccCCCCCCeEeEEeCCCCEEE
Confidence 99888743 222223333 344444444 3 4678899999999988765311 0111111 1234566
Q ss_pred EEEEeCCCCEEEEEeCCCcEEEEECC
Q 014934 296 GLKWSYDNRELASGGNDNRLFVWNQH 321 (415)
Q Consensus 296 ~l~~spdg~~lasg~~dg~I~iwd~~ 321 (415)
++..-.++..+++.+..|.++..++.
T Consensus 205 ~~~~v~~~~~l~~vt~~G~~kr~~~~ 230 (312)
T 1suu_A 205 KVLSVKENPYLLIVSENGYGKRLNMS 230 (312)
T ss_dssp EEEECTTCSEEEEEETTSEEEEEEGG
T ss_pred EEEEECCCCeEEEEECCCceEEEEHH
Confidence 66655566778888999998888874
No 362
>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}
Probab=69.59 E-value=61 Score=28.85 Aligned_cols=194 Identities=10% Similarity=0.019 Sum_probs=110.6
Q ss_pred CCCcceeEeecCC-CcEEEEEcCCeEEEEEC---CCCCeEEeEecCCCCCeEEEEEcC--CCCeEEEEECCCcEEEEECC
Q 014934 165 QDDFYLNLVDWSS-HNVLAVGLGNCVYLWNA---CSSKVTKLCDLGIDDSVCSVGWAN--RNTHLAVGTSHGKVQIWDAS 238 (415)
Q Consensus 165 ~~~~~i~~l~ws~-~~~la~~~d~~V~iwd~---~~~~~~~~~~~~~~~~V~~v~~sp--~g~~la~g~~dg~V~iwd~~ 238 (415)
..|..+..+.-+. +.++.....|.+|--.+ ....... + +...+.|..+.. . +..+++..+.+|.|+-..+.
T Consensus 22 ~gD~~~~~~~~~t~~~ll~fT~~G~v~~~~~~~lp~~~~~~-l-l~~~e~i~~v~~-~~~~~~~~v~~T~~G~iKr~~l~ 98 (276)
T 3no0_A 22 EKAPVVNILRVPFTEGLFLVSNRGRVYWIAGSQALQGSKVS-L-KSREEKIVGAFI-REKFGNRLLLATKKGYVKKIPLA 98 (276)
T ss_dssp SCCCEEEEEEEETTSCEEEEETTSEEEEECSHHHHTSEECC-C-SSTTCCEEEEEE-GGGSCSEEEEEETTSEEEEEEGG
T ss_pred CCCeEEEEEEECCCCEEEEEcCCCeEEEEEhhhCccCcccc-c-CCCCCEEEEEEC-CcCCCCEEEEEeCCCEEEEEEHH
Confidence 4555555555555 67888888888776543 2221111 2 455677877755 4 46789999999999998875
Q ss_pred CC------eeeEEecCCCccEEEEEee-CCEEEEEeCCCcEEEEECCCCC--------ccEEEeccccCCeEEEEEeCCC
Q 014934 239 RC------KRVRTMEGHRLRVGALAWS-SSLLSSGSRDKSILQRDIRAQE--------DFVSKLSGHKSEVCGLKWSYDN 303 (415)
Q Consensus 239 ~~------~~~~~l~~h~~~V~~l~~~-~~~l~sgs~dg~I~iwd~~~~~--------~~~~~~~~h~~~V~~l~~spdg 303 (415)
.. .....+.....-+.....+ .+.++..+..|.++.+....-. .....+. ....|.++...+++
T Consensus 99 ~~~~~~~G~~~i~lkegD~l~~~~~~~~~~~ill~T~~G~~~r~~~~eip~~gR~a~Gv~~i~L~-~~d~vv~~~~~~~~ 177 (276)
T 3no0_A 99 EFEYKAQGMPIIKLTEGDEVVSIASSVDETHILLFTKKGRVARFSVREVPPSTPGARGVQGIKLE-KNDETSGLRIWNGE 177 (276)
T ss_dssp GTTTCSTTEECSCCCTTCCEEEEEECCSSCEEEEEETTSEEEEEEGGGSCBCCTTCCCEECCCCC-TTCCEEEEEEESSC
T ss_pred HhhhhcCCeEEEecCCCCEEEEEEEeCCCCEEEEEECCCEEEEEEhhhCCCcCCCCCCEEEEccC-CCCEEEEEEEeCCC
Confidence 42 1222233333333333333 4678888999998888753211 0011122 23456666655667
Q ss_pred CEEEEEeCCCcEEEEECCC-------CceeEEeccCCCcEEEEEEcCCCCcEEEEEcCCCCCeEEE--EECC
Q 014934 304 RELASGGNDNRLFVWNQHS-------TQPVLKYCEHTAAVKAIAWSPHLHGLLASGGGTADRCIRF--WNTT 366 (415)
Q Consensus 304 ~~lasg~~dg~I~iwd~~~-------~~~~~~~~~h~~~V~~l~~sp~~~~llasggg~~d~~I~i--wd~~ 366 (415)
..++..+..|.++...+.. ++-+..+ ...+.+..+........+++.. .+|.+.. ++..
T Consensus 178 ~~ll~~T~~G~~kr~~~~e~~~~~R~gkGv~~i-~~~~~lv~~~~~~~~~~i~~~t---~~G~~ir~~~~~~ 245 (276)
T 3no0_A 178 PYLLVITAKGRVKKISHEEIPKTNRGVKGTEVS-GTKDTLVDLIPIKEEVELLITT---KNGKAFYDKINQK 245 (276)
T ss_dssp SEEEEEETTSCEEEEEGGGSCCCCTTCCCEECC-CSSSCEEEEEEESSEEEEEEEE---TTSCEEEEEEEGG
T ss_pred CEEEEEeCCCcEEEeEHHHcccCCCCCcceEEE-cCCCcEEEEEEeCCCCEEEEEc---CCCeEEEeeeCHH
Confidence 7888999999998887642 2223333 2334454443332223344443 3566655 6553
No 363
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=69.41 E-value=1e+02 Score=31.73 Aligned_cols=78 Identities=14% Similarity=0.052 Sum_probs=49.1
Q ss_pred ccEEEEEeeCCEEEEEeCCCcEEEEECCCCCccEE--------------Eecc-----ccCCeEEEEEeCCCCEEEEEeC
Q 014934 251 LRVGALAWSSSLLSSGSRDKSILQRDIRAQEDFVS--------------KLSG-----HKSEVCGLKWSYDNRELASGGN 311 (415)
Q Consensus 251 ~~V~~l~~~~~~l~sgs~dg~I~iwd~~~~~~~~~--------------~~~~-----h~~~V~~l~~spdg~~lasg~~ 311 (415)
.+-.-++.++..++++-.||.+.-.+-........ .+.+ ....|.++.+ +..++++-+.
T Consensus 162 ~Ph~L~avs~~~liVsL~DGGLLrL~r~~~~d~~~~~Fnd~s~l~SL~~lf~~~~~~~~~~~Is~~~~--~~~fLftL~~ 239 (729)
T 3f7f_A 162 VPHFLFYVSPQFSVVFLEDGGLLGLKKVDGVHYEPLLFNDNSYLKCLTRFFSRSSKSDYDSVISCKLF--HERYLIVLTQ 239 (729)
T ss_dssp CEEEEEECSSSBEEEEETTSCEECCEESSSSCEECCCCCCCGGGGGGSTTCCTTCSSCCCCEEEEEEE--TTTEEEEEET
T ss_pred CCcEEEEECCCeEEEEEcCCCEEEEEeccCCCcceeeecCCchhhhhHHhhcCCCCCCcCceEEEecc--CCcEEEEEEc
Confidence 34445556666788888888776555332221000 0111 1123454443 5789999999
Q ss_pred CCcEEEEECCCCceeEEec
Q 014934 312 DNRLFVWNQHSTQPVLKYC 330 (415)
Q Consensus 312 dg~I~iwd~~~~~~~~~~~ 330 (415)
|.++++||+++++++....
T Consensus 240 Dh~LRiWsL~t~~lv~t~D 258 (729)
T 3f7f_A 240 NCHLKIWDLTSFTLIQDYD 258 (729)
T ss_dssp TCEEEEEETTTTEEEEEEE
T ss_pred CCeEEEEEcCCCceEEeec
Confidence 9999999999998887664
No 364
>1a12_A RCC1, regulator of chromosome condensation 1; guanine nucleotide exchange factor, GEF, RAN, RAS-like nuclear GTP binding protein; 1.70A {Homo sapiens} SCOP: b.69.5.1 PDB: 1i2m_B
Probab=69.12 E-value=77 Score=29.79 Aligned_cols=226 Identities=10% Similarity=0.091 Sum_probs=122.0
Q ss_pred ceeEeecCCCcEEEEEcCCeEEEEECCCC-Ce------------EEeEecCCCCCeEEEEEcCCCCeEEEEECCCcEEEE
Q 014934 169 YLNLVDWSSHNVLAVGLGNCVYLWNACSS-KV------------TKLCDLGIDDSVCSVGWANRNTHLAVGTSHGKVQIW 235 (415)
Q Consensus 169 ~i~~l~ws~~~~la~~~d~~V~iwd~~~~-~~------------~~~~~~~~~~~V~~v~~sp~g~~la~g~~dg~V~iw 235 (415)
.|..++-.....++...++.|+.|-.... ++ ...+. -...|..|+.. ..+.++-+.+|.|..|
T Consensus 60 ~i~~va~G~~hs~~l~~~G~v~~wG~n~~GqLG~~~~~~~~~~~P~~v~--l~~~i~~va~G--~~hs~alt~~G~v~~w 135 (413)
T 1a12_A 60 DVVQAEAGGMHTVCLSKSGQVYSFGCNDEGALGRDTSVEGSEMVPGKVE--LQEKVVQVSAG--DSHTAALTDDGRVFLW 135 (413)
T ss_dssp CEEEEEECSSEEEEEETTSCEEEEECCTTSTTCSCCCSTTGGGSCEECC--CCSCEEEEEEC--SSEEEEEETTSCEEEE
T ss_pred CeEEEEeCCCeEEEEcCCCCEEEEECCCCCCCCCCCCCCccccCCeEec--CCCcEEEEecC--CCeEEEEcCCCcEEEe
Confidence 35566666667788888999999975431 10 01111 12356655543 3455556788999999
Q ss_pred EC--CC-Ce------------eeEEecCCCccEEEEEeeCCEEEEEeCCCcEEEEECCCCCcc-----------------
Q 014934 236 DA--SR-CK------------RVRTMEGHRLRVGALAWSSSLLSSGSRDKSILQRDIRAQEDF----------------- 283 (415)
Q Consensus 236 d~--~~-~~------------~~~~l~~h~~~V~~l~~~~~~l~sgs~dg~I~iwd~~~~~~~----------------- 283 (415)
-. .. ++ +.. + .....|..|+......+.-..||.|+.|-.....++
T Consensus 136 G~~~n~~GqlG~~~~~~~~~~P~~-v-~~~~~i~~ia~G~~hs~alt~~G~v~~wG~n~~GqLG~~~~~~~~~~~~~~~~ 213 (413)
T 1a12_A 136 GSFRDNNGVIGLLEPMKKSMVPVQ-V-QLDVPVVKVASGNDHLVMLTADGDLYTLGCGEQGQLGRVPELFANRGGRQGLE 213 (413)
T ss_dssp ECEEETTEEEESSBBTBCEEEEEE-E-CCSSCEEEEEECSSEEEEEETTSCEEEEECCTTSTTCSCGGGTSSSCGGGGHH
T ss_pred eCCcCCCCccCcCCccccccCCEE-e-cCCCCEEEEEecCceEEEEcCCCCEEEeeCCCCCccCCCcccccccccccccc
Confidence 64 11 11 111 1 123467777777677777789999999976532211
Q ss_pred ----EEEecc------ccCCeEEEEEeCCCCEEEEEeCCCcEEEEECCCC-c-------e---eEEeccC---CCcEEEE
Q 014934 284 ----VSKLSG------HKSEVCGLKWSYDNRELASGGNDNRLFVWNQHST-Q-------P---VLKYCEH---TAAVKAI 339 (415)
Q Consensus 284 ----~~~~~~------h~~~V~~l~~spdg~~lasg~~dg~I~iwd~~~~-~-------~---~~~~~~h---~~~V~~l 339 (415)
...+.. ....|..++... .+.+.-..||.|+.|=.... + . -..+..- ...|..|
T Consensus 214 ~~~~P~~v~~~~~g~~~~~~i~~ia~G~--~hs~alt~~G~v~~wG~n~~gqLG~~~~~~~~~P~~v~~l~~~~~~v~~i 291 (413)
T 1a12_A 214 RLLVPKCVMLKSRGSRGHVRFQDAFCGA--YFTFAISHEGHVYGFGLSNYHQLGTPGTESCFIPQNLTSFKNSTKSWVGF 291 (413)
T ss_dssp HHHSCEECCCBCSSCCSBCCEEEEEEET--TEEEEEETTCCEEEEECCTTSTTSCSSCSCEEEEEECGGGCCTTCCEEEE
T ss_pred ccccCceEeeccccccCCccEEEEEeCC--CEEEEEeCCCCEEEEeCCCCcCCCCCCCCcccccEEchhccCCCceEEEE
Confidence 000110 123466665543 34444457889999976431 0 0 1111111 1346666
Q ss_pred EEcCCCCcEEEEEcCCCCCeEEEEECCC------C----c--EEEEeeCCCCEEEEEECCCCCeEEEEEecCCCcEEEEE
Q 014934 340 AWSPHLHGLLASGGGTADRCIRFWNTTT------N----T--HLSCMDTGSQVCNLVWSKNVNELVSTHGYSQNQIIVWR 407 (415)
Q Consensus 340 ~~sp~~~~llasggg~~d~~I~iwd~~t------~----~--~~~~~~~~~~V~~l~~s~~~~~l~s~~g~~dg~I~vw~ 407 (415)
+.-.. +.++.. .|+.|+.|-... + . ....+..-..|..++...+.. ++. ..||.|+.|-
T Consensus 292 a~G~~--hs~al~---~~G~v~~wG~n~~GqLG~g~~~~~~~~P~~v~~l~~v~~v~~G~~hs-~al---t~~G~v~~wG 362 (413)
T 1a12_A 292 SGGQH--HTVCMD---SEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISRLPAVSSVACGASVG-YAV---TKDGRVFAWG 362 (413)
T ss_dssp EECSS--EEEEEE---TTSCEEEEECCGGGTTCSCTTCCCEEEEEECCSSSSEEEEEECSSEE-EEE---ETTSCEEEEE
T ss_pred ecccc--eEEEEe---CCCCEEEeeCCCCCccCCCCCCccccCCEEecccCceeEEEECcceE-EEE---eCCCCEEEec
Confidence 65433 234433 589999996532 1 0 111222233666666654432 222 3688999997
Q ss_pred CCCC
Q 014934 408 YPTM 411 (415)
Q Consensus 408 ~~s~ 411 (415)
....
T Consensus 363 ~n~~ 366 (413)
T 1a12_A 363 MGTN 366 (413)
T ss_dssp CCTT
T ss_pred CCCC
Confidence 6543
No 365
>3l6v_A GYRA, DNA gyrase subunit A; gyrase A C-terminal domain, GYRA C-terminal domain, DNA wrapping, beta-strand-bearing proline, ATP-binding; HET: DNA; 2.19A {Xanthomonas campestris PV}
Probab=68.27 E-value=79 Score=29.58 Aligned_cols=113 Identities=14% Similarity=0.065 Sum_probs=67.6
Q ss_pred CCcceeEeecCC-CcEEEEEcCCeEEEEECCC---------CC-eEEeEecCCCCCeEEEEEcC---CCCeEEEEECCCc
Q 014934 166 DDFYLNLVDWSS-HNVLAVGLGNCVYLWNACS---------SK-VTKLCDLGIDDSVCSVGWAN---RNTHLAVGTSHGK 231 (415)
Q Consensus 166 ~~~~i~~l~ws~-~~~la~~~d~~V~iwd~~~---------~~-~~~~~~~~~~~~V~~v~~sp---~g~~la~g~~dg~ 231 (415)
+|+.+..+.-+. +.+|.+...|.++-+.... |. ...++.+...+.|.++.... ++.+|+.++..|.
T Consensus 45 ~D~l~~~~~~~t~d~ll~fT~~G~~~~~~~~eip~~~r~a~G~~i~~ll~L~~~e~Iv~~~~~~~~~~~~~ll~~T~~G~ 124 (370)
T 3l6v_A 45 EDFIDQLWLVNTHDTLLTFTSSGKVFWLPVHQLPEAGSNARGRPIINWIPLESGERVQAVLPVREYADNRYVFMATRNGT 124 (370)
T ss_dssp CCCEEEEEEECTTCEEEEEETTSEEEEEEGGGSCBCCTTSCCEEGGGSCCCCTTCCEEEEEEESCCCTTCEEEEEETTSE
T ss_pred CCEEEEEEEecCCCEEEEEeCCCeEEEEEHHHCcCCCcccCCcCHhhccCCCCCCEEEEEEEeccCCCCcEEEEEeCCCe
Confidence 455555555555 5677788888877665421 11 12233344556777765543 4568999999999
Q ss_pred EEEEECCC-------CeeeEEecCCCccEEEEEee-CCEEEEEeCCCcEEEEECC
Q 014934 232 VQIWDASR-------CKRVRTMEGHRLRVGALAWS-SSLLSSGSRDKSILQRDIR 278 (415)
Q Consensus 232 V~iwd~~~-------~~~~~~l~~h~~~V~~l~~~-~~~l~sgs~dg~I~iwd~~ 278 (415)
++...+.. +.....+.....-|.....+ .+.++..+.+|.+..+...
T Consensus 125 vKrt~l~e~~~~~~~G~~ai~L~~~d~lv~v~~~~~~~~i~l~T~~G~~irf~~~ 179 (370)
T 3l6v_A 125 VKKTPLSEFAFRLARGKIAINLDEGDALVGVALTDGDRDVLLFASNGKTVRFGES 179 (370)
T ss_dssp EEEEEGGGGCSCCTTCEESSCCCTTCCEEEEEEECSCCEEEEEETTSEEEEEEGG
T ss_pred EEEeEHHHhhcccCCceEEEEeCCCCEEEEEEEeCCCceEEEEeCCCeEEEEEcc
Confidence 99888643 22222233323333333334 4678888899988888754
No 366
>1suu_A DNA gyrase subunit A; topoisomerase,DNA gyrase, beta-propeller, beta-pinwheel, ISO; HET: DNA; 1.75A {Borrelia burgdorferi} SCOP: b.68.10.1
Probab=65.46 E-value=80 Score=28.63 Aligned_cols=186 Identities=11% Similarity=0.043 Sum_probs=103.9
Q ss_pred CCCCeEEEEECCCcEEEEECCCCee-------eE--EecCCCccEEEEEee-CCEEEEEeCCCcEEEEECCC---CCc--
Q 014934 218 NRNTHLAVGTSHGKVQIWDASRCKR-------VR--TMEGHRLRVGALAWS-SSLLSSGSRDKSILQRDIRA---QED-- 282 (415)
Q Consensus 218 p~g~~la~g~~dg~V~iwd~~~~~~-------~~--~l~~h~~~V~~l~~~-~~~l~sgs~dg~I~iwd~~~---~~~-- 282 (415)
++..++++.+.+|.|+--.+...+. +. .+.....-+..+..+ .+.++..+..|.++-..... ...
T Consensus 6 ~~e~~~v~~T~~G~iKr~~~~~~~~~~~~~~g~~~~~lke~D~l~~~~~~~~~~~ll~~T~~G~~~~~~~~~ip~~~r~~ 85 (312)
T 1suu_A 6 QKENIVVMLTKKGFLKRLSQNEYKLQGTGGKGLSSFDLNDGDEIVIALCVNTHDYLFMISNEGKLYLINAYEIKDSSRAS 85 (312)
T ss_dssp --CEEEEEEETTCBEEEEEGGGSCBCCSSCCCEECCCCCTTCCEEEEEEEETTCEEEEEETTSEEEEEEGGGSCC-----
T ss_pred CCCCEEEEEeCCCEEEEeEHHHhhccccCCCCceecccCCCCEEEEEEEECCCCEEEEEECCCeEEEEEHHHCCCCCccC
Confidence 4566788889999998876643211 11 123333333333333 46788888999877765532 110
Q ss_pred ---c---EEEeccccCCeEEEEEeC---CCCEEEEEeCCCcEEEEECCC-------CceeEEeccCCCcEEEEEEcCCCC
Q 014934 283 ---F---VSKLSGHKSEVCGLKWSY---DNRELASGGNDNRLFVWNQHS-------TQPVLKYCEHTAAVKAIAWSPHLH 346 (415)
Q Consensus 283 ---~---~~~~~~h~~~V~~l~~sp---dg~~lasg~~dg~I~iwd~~~-------~~~~~~~~~h~~~V~~l~~sp~~~ 346 (415)
. ...+. ....|.++..-+ +..+|+..+..|.++...+.. +.....+.. ...+..+.....+.
T Consensus 86 ~G~~i~~~l~l~-~~e~i~~~~~~~~~~~~~~ll~~T~~G~~kr~~l~~~~~~r~~G~~~i~L~~-~d~lv~~~~~~~~~ 163 (312)
T 1suu_A 86 KGQNISELINLG-DQEEILTIKNSKDLTDDAYLLLTTASGKIARFESTDFKAVKSRGVIVIKLND-KDFVTSAEIVFKDE 163 (312)
T ss_dssp --CBGGGTSCCC-TTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCC----CEECBCCCT-TCCEEEEEEECTTC
T ss_pred CCcChhhccCCC-CCCEEEEEEEeccCCCCCEEEEEeCCCeEEEEEHHHhhccCCCcEEEEecCC-CCEEEEEEEeCCCC
Confidence 0 00111 123455554332 467888899999999888642 222333433 44555555544344
Q ss_pred cEEEEEcCCCCCeEEEEECCC---------CcEEEEeeCCCCEEEEEECCCCCeEEEEEecCCCcEEEEECCC
Q 014934 347 GLLASGGGTADRCIRFWNTTT---------NTHLSCMDTGSQVCNLVWSKNVNELVSTHGYSQNQIIVWRYPT 410 (415)
Q Consensus 347 ~llasggg~~d~~I~iwd~~t---------~~~~~~~~~~~~V~~l~~s~~~~~l~s~~g~~dg~I~vw~~~s 410 (415)
.+++.. .+|.+..++... |...-.+..+..|..+..-.++..+++ .+..|.++...+..
T Consensus 164 ~i~l~T---~~G~~~r~~~~ev~~~gR~~~Gv~~i~L~~~d~vv~~~~v~~~~~l~~--vt~~G~~kr~~~~e 231 (312)
T 1suu_A 164 KVICLS---KKGSAFIFNSRDVRLTNRGTQGVCGMKLKEGDLFVKVLSVKENPYLLI--VSENGYGKRLNMSK 231 (312)
T ss_dssp EEEEEE---TTSEEEEEEGGGSCBCCTTBCCEECCCCCTTCCEEEEEECTTCSEEEE--EETTSEEEEEEGGG
T ss_pred EEEEEe---CCCcEEEEEHHHccccCCCCCCeEeEEeCCCCEEEEEEEECCCCeEEE--EECCCceEEEEHHH
Confidence 455544 578888887643 222223334667777766655666665 35678887777654
No 367
>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}
Probab=63.35 E-value=82 Score=28.01 Aligned_cols=195 Identities=12% Similarity=0.040 Sum_probs=108.8
Q ss_pred CCCeEEEEEcCCCCeEEEEECCCcEEEEEC---CCCeeeEEecCCCccEEEEEee---CCEEEEEeCCCcEEEEECCCCC
Q 014934 208 DDSVCSVGWANRNTHLAVGTSHGKVQIWDA---SRCKRVRTMEGHRLRVGALAWS---SSLLSSGSRDKSILQRDIRAQE 281 (415)
Q Consensus 208 ~~~V~~v~~sp~g~~la~g~~dg~V~iwd~---~~~~~~~~l~~h~~~V~~l~~~---~~~l~sgs~dg~I~iwd~~~~~ 281 (415)
.+.+..+.-.....+|+.-+..|.++--.+ ...+....+. ....|..+... ...++..+.+|.|+...+....
T Consensus 23 gD~~~~~~~~~t~~~ll~fT~~G~v~~~~~~~lp~~~~~~ll~-~~e~i~~v~~~~~~~~~~v~~T~~G~iKr~~l~~~~ 101 (276)
T 3no0_A 23 KAPVVNILRVPFTEGLFLVSNRGRVYWIAGSQALQGSKVSLKS-REEKIVGAFIREKFGNRLLLATKKGYVKKIPLAEFE 101 (276)
T ss_dssp CCCEEEEEEEETTSCEEEEETTSEEEEECSHHHHTSEECCCSS-TTCCEEEEEEGGGSCSEEEEEETTSEEEEEEGGGTT
T ss_pred CCeEEEEEEECCCCEEEEEcCCCeEEEEEhhhCccCcccccCC-CCCEEEEEECCcCCCCEEEEEeCCCEEEEEEHHHhh
Confidence 456666655555666777788888765433 2221111133 34455555332 4689999999999998865431
Q ss_pred ---ccEE--EeccccCCeEEEEEeCCCCEEEEEeCCCcEEEEECCC---------CceeEEeccCCCcEEEEEEcCCCCc
Q 014934 282 ---DFVS--KLSGHKSEVCGLKWSYDNRELASGGNDNRLFVWNQHS---------TQPVLKYCEHTAAVKAIAWSPHLHG 347 (415)
Q Consensus 282 ---~~~~--~~~~h~~~V~~l~~spdg~~lasg~~dg~I~iwd~~~---------~~~~~~~~~h~~~V~~l~~sp~~~~ 347 (415)
.-.. .+.. ...+..+........++..++.|.++.+.... |.....+.. ...|.++...+++..
T Consensus 102 ~~~~G~~~i~lke-gD~l~~~~~~~~~~~ill~T~~G~~~r~~~~eip~~gR~a~Gv~~i~L~~-~d~vv~~~~~~~~~~ 179 (276)
T 3no0_A 102 YKAQGMPIIKLTE-GDEVVSIASSVDETHILLFTKKGRVARFSVREVPPSTPGARGVQGIKLEK-NDETSGLRIWNGEPY 179 (276)
T ss_dssp TCSTTEECSCCCT-TCCEEEEEECCSSCEEEEEETTSEEEEEEGGGSCBCCTTCCCEECCCCCT-TCCEEEEEEESSCSE
T ss_pred hhcCCeEEEecCC-CCEEEEEEEeCCCCEEEEEECCCEEEEEEhhhCCCcCCCCCCEEEEccCC-CCEEEEEEEeCCCCE
Confidence 0011 1222 34566666655667888899999988887532 222223322 345655544444444
Q ss_pred EEEEEcCCCCCeEEEEECCC-------CcEEEEeeCCCCEEEEEECCCCCeEEEEEecCCCcEEE--EECCC
Q 014934 348 LLASGGGTADRCIRFWNTTT-------NTHLSCMDTGSQVCNLVWSKNVNELVSTHGYSQNQIIV--WRYPT 410 (415)
Q Consensus 348 llasggg~~d~~I~iwd~~t-------~~~~~~~~~~~~V~~l~~s~~~~~l~s~~g~~dg~I~v--w~~~s 410 (415)
+++.. ..|.++...+.. ++-+..+..+..+..+........++. .+.+|.+.. ++...
T Consensus 180 ll~~T---~~G~~kr~~~~e~~~~~R~gkGv~~i~~~~~lv~~~~~~~~~~i~~--~t~~G~~ir~~~~~~~ 246 (276)
T 3no0_A 180 LLVIT---AKGRVKKISHEEIPKTNRGVKGTEVSGTKDTLVDLIPIKEEVELLI--TTKNGKAFYDKINQKD 246 (276)
T ss_dssp EEEEE---TTSCEEEEEGGGSCCCCTTCCCEECCCSSSCEEEEEEESSEEEEEE--EETTSCEEEEEEEGGG
T ss_pred EEEEe---CCCcEEEeEHHHcccCCCCCcceEEEcCCCcEEEEEEeCCCCEEEE--EcCCCeEEEeeeCHHH
Confidence 55544 578888887632 223333344455555544333344444 346777777 76543
No 368
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=63.14 E-value=16 Score=37.49 Aligned_cols=70 Identities=16% Similarity=0.115 Sum_probs=41.8
Q ss_pred cEEEEEEcCCCCcEEEEEcCCCCCeEEEEECCCCcEEEEeeCCCCE--EEEEECC----------CCCeEEEEEecCCCc
Q 014934 335 AVKAIAWSPHLHGLLASGGGTADRCIRFWNTTTNTHLSCMDTGSQV--CNLVWSK----------NVNELVSTHGYSQNQ 402 (415)
Q Consensus 335 ~V~~l~~sp~~~~llasggg~~d~~I~iwd~~t~~~~~~~~~~~~V--~~l~~s~----------~~~~l~s~~g~~dg~ 402 (415)
.|.++.+. ..++++.+ .|..+|+||+.+++++...+-.... ..-...+ -+.++++-.-...|.
T Consensus 223 ~Is~~~~~--~~fLftL~---~Dh~LRiWsL~t~~lv~t~DL~~~~~~~~s~L~~~~~~~~~Lrl~~~~lv~y~P~~~G~ 297 (729)
T 3f7f_A 223 VISCKLFH--ERYLIVLT---QNCHLKIWDLTSFTLIQDYDMVSQSDSDPSHFRKVEAVGEYLSLYNNTLVTLLPLENGL 297 (729)
T ss_dssp EEEEEEET--TTEEEEEE---TTCEEEEEETTTTEEEEEEETTTTSCCCSSCCCCCCSCCCCEEESSSEEEEEETTTTCE
T ss_pred eEEEeccC--CcEEEEEE---cCCeEEEEEcCCCceEEeeccccCccccccccCcccCcchhHhheeeEEEEEecCCCCe
Confidence 45555443 44455555 7999999999999998887642110 0000111 125555433346789
Q ss_pred EEEEECC
Q 014934 403 IIVWRYP 409 (415)
Q Consensus 403 I~vw~~~ 409 (415)
.++|++.
T Consensus 298 Fk~~~l~ 304 (729)
T 3f7f_A 298 FQMGTLL 304 (729)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 9999874
No 369
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=62.92 E-value=28 Score=34.85 Aligned_cols=58 Identities=10% Similarity=0.133 Sum_probs=41.1
Q ss_pred eeEeecCC-CcEEEEEc-------------CCeEEEEECCCCCeEEeEecCCCCCeEEEEEcCCCCeEEEEE
Q 014934 170 LNLVDWSS-HNVLAVGL-------------GNCVYLWNACSSKVTKLCDLGIDDSVCSVGWANRNTHLAVGT 227 (415)
Q Consensus 170 i~~l~ws~-~~~la~~~-------------d~~V~iwd~~~~~~~~~~~~~~~~~V~~v~~sp~g~~la~g~ 227 (415)
.+-|.+.+ +++..+.. .+.|+.++..++++..++.......++.++|+||++.|.+.-
T Consensus 478 PDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktLfV~v 549 (592)
T 4a9v_A 478 PDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVGI 549 (592)
T ss_dssp EEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEEE
T ss_pred CCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEEEEEE
Confidence 45677888 44444221 126888888889988877533356799999999999888764
No 370
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=62.83 E-value=1e+02 Score=28.96 Aligned_cols=183 Identities=9% Similarity=0.069 Sum_probs=104.6
Q ss_pred CeEEEEECCCC--CeEEeEecCC-----CCCeEEEEEc---CC----CCeEEEEE-CCCcEEEEECCCCeeeEEecCCCc
Q 014934 187 NCVYLWNACSS--KVTKLCDLGI-----DDSVCSVGWA---NR----NTHLAVGT-SHGKVQIWDASRCKRVRTMEGHRL 251 (415)
Q Consensus 187 ~~V~iwd~~~~--~~~~~~~~~~-----~~~V~~v~~s---p~----g~~la~g~-~dg~V~iwd~~~~~~~~~l~~h~~ 251 (415)
-+|.+||+.++ ++++.+.+.. ...+..+.+. ++ +.++.+.. ..+.|.++|+.+++..+.+..+
T Consensus 123 pkLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~~~~-- 200 (381)
T 3q6k_A 123 PAIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANPKGDCSETFVYITNFLRGALFIYDHKKQDSWNVTHPT-- 200 (381)
T ss_dssp CEEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCTTTTSCSEEEEEEETTTTEEEEEETTTTEEEEEECGG--
T ss_pred ceEEEEECCCCCceeEEEEECCHHhcccCCccceEEEecccCCCCCCccEEEEEcCCCCcEEEEECCCCcEEEEccCC--
Confidence 37999999999 9998888742 3467888887 22 23444443 3567999999999887766321
Q ss_pred cEEEEEeeCCEEEEEeCCCcEEEEECCCCCccEEEeccccCCeEEEEEeCC----CCEEEEEeCCC-cEEEEE---CCCC
Q 014934 252 RVGALAWSSSLLSSGSRDKSILQRDIRAQEDFVSKLSGHKSEVCGLKWSYD----NRELASGGNDN-RLFVWN---QHST 323 (415)
Q Consensus 252 ~V~~l~~~~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~spd----g~~lasg~~dg-~I~iwd---~~~~ 323 (415)
+.++....-.-+|.- . .+ ...|.+|+++|+ ++.|.-..-.+ .++--. +++.
T Consensus 201 ------~~pd~~~~~~i~G~~-----------~-~~---~~Gi~gIaLsp~~~~~~~~LYf~plss~~ly~V~T~~L~~~ 259 (381)
T 3q6k_A 201 ------FKAERPTKFDYGGKE-----------Y-EF---KAGIFGITLGDRDSEGNRPAYYLAGSAIKVYSVNTKELKQK 259 (381)
T ss_dssp ------GSCCSCEEEEETTEE-----------E-EE---CCCEEEEEECCCCTTSCCEEEEEESSCSEEEEEEHHHHSST
T ss_pred ------CccccCcceEECCEE-----------e-Ee---ccCceEEEecCCcCCCCeEEEEEECCCCcEEEEEHHHhhCc
Confidence 112100000011111 1 11 246999999998 67776655444 333332 1222
Q ss_pred ---ceeEEeccCC---CcEEEEEEcCCCCcEEEEEcCCCCCeEEEEECCC-C---cEEEEeeC---CCCEEEEEECCCCC
Q 014934 324 ---QPVLKYCEHT---AAVKAIAWSPHLHGLLASGGGTADRCIRFWNTTT-N---THLSCMDT---GSQVCNLVWSKNVN 390 (415)
Q Consensus 324 ---~~~~~~~~h~---~~V~~l~~sp~~~~llasggg~~d~~I~iwd~~t-~---~~~~~~~~---~~~V~~l~~s~~~~ 390 (415)
..+..+ +.. ..-..++..+....|+.+-- ....|..|+..+ . +.+..+.. -..+..+.+..+|.
T Consensus 260 ~~~~~v~~~-G~kg~~s~~~~~~~D~~~G~ly~~~~--~~~aI~~w~~~~~~~~~~n~~~l~~d~~l~~pd~~~i~~~g~ 336 (381)
T 3q6k_A 260 GGKLNPELL-GNRGKYNDAIALAYDPKTKVIFFAEA--NTKQVSCWNTQKMPLRMKNTDVVYTSSRFVFGTDISVDSKGG 336 (381)
T ss_dssp TCCCCCEEE-EECCTTCCEEEEEECTTTCEEEEEES--SSSEEEEEETTSCSBCGGGEEEEEECTTCCSEEEEEECTTSC
T ss_pred chhhceEEe-eecCCCCCcceEEEeCCCCeEEEEec--cCCeEEEEeCCCCccccCceEEEEECCCccccCeEEECCCCe
Confidence 222222 222 33445677643334666655 789999999976 1 12233322 23477888888887
Q ss_pred eEEEE
Q 014934 391 ELVST 395 (415)
Q Consensus 391 ~l~s~ 395 (415)
..+.+
T Consensus 337 Lwv~s 341 (381)
T 3q6k_A 337 LWFMS 341 (381)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 66553
No 371
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=58.08 E-value=26 Score=35.21 Aligned_cols=55 Identities=9% Similarity=0.126 Sum_probs=41.1
Q ss_pred eEeecCC-CcEEEEEcCC--------------eEEEEECCCCCeEEeEecCCCCCeEEEEEcCCCCeEEEE
Q 014934 171 NLVDWSS-HNVLAVGLGN--------------CVYLWNACSSKVTKLCDLGIDDSVCSVGWANRNTHLAVG 226 (415)
Q Consensus 171 ~~l~ws~-~~~la~~~d~--------------~V~iwd~~~~~~~~~~~~~~~~~V~~v~~sp~g~~la~g 226 (415)
--|.|++ +++ .++.|+ .+.+.+..++++.+++......+++.++|+||++.|.+.
T Consensus 479 DNL~fd~~G~L-wI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 479 DGLGFDKAGRL-WILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp EEEEECTTCCE-EEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred cceEECCCCCE-EEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEEEE
Confidence 3467888 554 444332 466778888999888876667899999999999988775
No 372
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=56.30 E-value=37 Score=34.14 Aligned_cols=59 Identities=17% Similarity=0.165 Sum_probs=43.1
Q ss_pred eEEEEEeCCCCEEEEEeCC------------CcEEEEECCCCceeEEeccC-CCcEEEEEEcCCCCcEEEEE
Q 014934 294 VCGLKWSYDNRELASGGND------------NRLFVWNQHSTQPVLKYCEH-TAAVKAIAWSPHLHGLLASG 352 (415)
Q Consensus 294 V~~l~~spdg~~lasg~~d------------g~I~iwd~~~~~~~~~~~~h-~~~V~~l~~sp~~~~llasg 352 (415)
.-.|+|+|.|++++.-..+ +.+.+.+..+++...-+..+ ...++.++|+|+++.|++.-
T Consensus 478 PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlfvni 549 (592)
T 3zwu_A 478 PDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVGI 549 (592)
T ss_dssp EEEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEEE
T ss_pred CcceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEEEEE
Confidence 4679999999977764432 35667777777766555554 46789999999999887764
No 373
>1zvt_A Topoisomerase IV subunit A; beta-pinwheel, ATPase, supercoiling, decatenation, DNA bindi topology; 1.70A {Escherichia coli}
Probab=55.29 E-value=78 Score=27.81 Aligned_cols=114 Identities=13% Similarity=0.075 Sum_probs=70.3
Q ss_pred CCCcceeEeecCC-CcEEEEEcCCeEEEEECCC-------CCeE-EeEecCCCCCeEEEEEcCCCCeEEEEECCCcEEEE
Q 014934 165 QDDFYLNLVDWSS-HNVLAVGLGNCVYLWNACS-------SKVT-KLCDLGIDDSVCSVGWANRNTHLAVGTSHGKVQIW 235 (415)
Q Consensus 165 ~~~~~i~~l~ws~-~~~la~~~d~~V~iwd~~~-------~~~~-~~~~~~~~~~V~~v~~sp~g~~la~g~~dg~V~iw 235 (415)
.+|+.+..+.-+. +.++.+...|.++-..... |... ..+.+...+.|.++....++.+|+.++..|.++..
T Consensus 31 e~D~l~~~~~~~t~~~ll~~T~~Gr~~~~~~~elp~~r~~G~~i~~~i~L~~~e~Iv~~~~~~~~~~lll~T~~G~~Kr~ 110 (256)
T 1zvt_A 31 AGDSFKAAVKGKSNQPVVFVDSTGRSYAIDPITLPSARGQGEPLTGKLTLPPGATVDHMLMESDDQKLLMASDAGYGFVC 110 (256)
T ss_dssp TTCCEEEEEEEETTSCEEEEETTSEEEEECGGGSCCSSSCCEEGGGTCCCCTTCCEEEEECCCTTCEEEEEBTTSEEEEE
T ss_pred CCCEEEEEEEeCCCCEEEEEeCCCeEEEEEHHHCCCcCCCCeEeeeeecCCCCCEEEEEEEeCCCCEEEEEeCCCeEEEe
Confidence 3455555554444 6788888888877665422 1111 23334556778887554566778889999999998
Q ss_pred ECCC-------CeeeEEecCCCccEEEEEe-e-CCEEEEEeCCCcEEEEECC
Q 014934 236 DASR-------CKRVRTMEGHRLRVGALAW-S-SSLLSSGSRDKSILQRDIR 278 (415)
Q Consensus 236 d~~~-------~~~~~~l~~h~~~V~~l~~-~-~~~l~sgs~dg~I~iwd~~ 278 (415)
.+.. +..+..+.....-|..... + .+.++..+.+|.+..+.+.
T Consensus 111 ~~~e~~~~~r~G~~~i~L~~~d~lv~~~~~~~~~~~i~l~T~~G~~lrf~~~ 162 (256)
T 1zvt_A 111 TFNDLVARNRAGKALITLPENAHVMPPVVIEDASDMLLAITQAGRMLMFPVS 162 (256)
T ss_dssp EGGGGCCCSTTCEECBCCCTTCCBCCCEECCCTTCEEEEEETTSEEEEEEGG
T ss_pred EHHHhcccCcCceEEEEECCCCEEEEEEEecCCCCEEEEEcCCCeEEEEEHH
Confidence 8732 2333334333333333333 2 4678888999998888774
No 374
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=51.61 E-value=58 Score=35.54 Aligned_cols=38 Identities=21% Similarity=0.216 Sum_probs=30.8
Q ss_pred CeEEEEEcCCCCeEEEEECCCcEEEEECCCCeeeEEec
Q 014934 210 SVCSVGWANRNTHLAVGTSHGKVQIWDASRCKRVRTME 247 (415)
Q Consensus 210 ~V~~v~~sp~g~~la~g~~dg~V~iwd~~~~~~~~~l~ 247 (415)
.+.+++..++..++++-+.|++++||++.+++++.+..
T Consensus 239 ~~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t~D 276 (1139)
T 4fhn_B 239 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE 276 (1139)
T ss_dssp CBSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEEEEE
T ss_pred eeEEeeccCCccEEEEEeCCCEEEEEECCCCCeEEeec
Confidence 34455566778899999999999999999999887753
No 375
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=50.98 E-value=66 Score=32.15 Aligned_cols=61 Identities=15% Similarity=0.141 Sum_probs=44.1
Q ss_pred CeEEEEEeCCCCEEEEEeC------------CCcEEEEECCCCceeEEeccC-CCcEEEEEEcCCCCcEEEEEc
Q 014934 293 EVCGLKWSYDNRELASGGN------------DNRLFVWNQHSTQPVLKYCEH-TAAVKAIAWSPHLHGLLASGG 353 (415)
Q Consensus 293 ~V~~l~~spdg~~lasg~~------------dg~I~iwd~~~~~~~~~~~~h-~~~V~~l~~sp~~~~llasgg 353 (415)
....|.|+++|.+.++-.. .+.|+.++..+++....+... ...++.++|+|+++.|+++-.
T Consensus 477 sPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktLfV~vQ 550 (592)
T 4a9v_A 477 SPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVGIQ 550 (592)
T ss_dssp CEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEEEE
T ss_pred CCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEEEEEEe
Confidence 4567999999998774321 236777788778765555443 356899999999998888763
No 376
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=47.09 E-value=1.9e+02 Score=27.16 Aligned_cols=151 Identities=11% Similarity=0.135 Sum_probs=82.5
Q ss_pred cEEEEECCCC--eeeEEecC------CCccEEEEEee---------CCEEEEEe-CCCcEEEEECCCCCccEEEeccccC
Q 014934 231 KVQIWDASRC--KRVRTMEG------HRLRVGALAWS---------SSLLSSGS-RDKSILQRDIRAQEDFVSKLSGHKS 292 (415)
Q Consensus 231 ~V~iwd~~~~--~~~~~l~~------h~~~V~~l~~~---------~~~l~sgs-~dg~I~iwd~~~~~~~~~~~~~h~~ 292 (415)
.|.+||+.+. +.++.+.- ....+..+.++ ..++.... ..+.|.++|+.++.. .+.+ |..
T Consensus 124 kLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~~~~c~~~~aYItD~~~~gLIVydl~~~~s-wRv~--~~~ 200 (381)
T 3q6k_A 124 AIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANPKGDCSETFVYITNFLRGALFIYDHKKQDS-WNVT--HPT 200 (381)
T ss_dssp EEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCTTTTSCSEEEEEEETTTTEEEEEETTTTEE-EEEE--CGG
T ss_pred eEEEEECCCCCceeEEEEECCHHhcccCCccceEEEecccCCCCCCccEEEEEcCCCCcEEEEECCCCcE-EEEc--cCC
Confidence 5677888887 77766642 23457777776 12333333 466799999988873 3333 221
Q ss_pred CeEEEEEeCCCCEEEEEeCCCcEEEEECCCCceeEEeccCCCcEEEEEEcCC----CCcEEEEEcCCCCCeEEEEEC---
Q 014934 293 EVCGLKWSYDNRELASGGNDNRLFVWNQHSTQPVLKYCEHTAAVKAIAWSPH----LHGLLASGGGTADRCIRFWNT--- 365 (415)
Q Consensus 293 ~V~~l~~spdg~~lasg~~dg~I~iwd~~~~~~~~~~~~h~~~V~~l~~sp~----~~~llasggg~~d~~I~iwd~--- 365 (415)
|.|+.....+. +|.-. .+ ...|..|+++|+ ++.|+...- ....+.--.+
T Consensus 201 ------~~pd~~~~~~i--~G~~~-----------~~---~~Gi~gIaLsp~~~~~~~~LYf~pl--ss~~ly~V~T~~L 256 (381)
T 3q6k_A 201 ------FKAERPTKFDY--GGKEY-----------EF---KAGIFGITLGDRDSEGNRPAYYLAG--SAIKVYSVNTKEL 256 (381)
T ss_dssp ------GSCCSCEEEEE--TTEEE-----------EE---CCCEEEEEECCCCTTSCCEEEEEES--SCSEEEEEEHHHH
T ss_pred ------CccccCcceEE--CCEEe-----------Ee---ccCceEEEecCCcCCCCeEEEEEEC--CCCcEEEEEHHHh
Confidence 34441111111 22211 11 346889999998 666766653 2222222221
Q ss_pred CC---CcEEEEee-CC--CCEEEEEEC-CCCCeEEEEEecCCCcEEEEECCC
Q 014934 366 TT---NTHLSCMD-TG--SQVCNLVWS-KNVNELVSTHGYSQNQIIVWRYPT 410 (415)
Q Consensus 366 ~t---~~~~~~~~-~~--~~V~~l~~s-~~~~~l~s~~g~~dg~I~vw~~~s 410 (415)
+. ...++.+. .+ ++-..++.. .+|..+++ -...+.|..|+...
T Consensus 257 ~~~~~~~~v~~~G~kg~~s~~~~~~~D~~~G~ly~~--~~~~~aI~~w~~~~ 306 (381)
T 3q6k_A 257 KQKGGKLNPELLGNRGKYNDAIALAYDPKTKVIFFA--EANTKQVSCWNTQK 306 (381)
T ss_dssp SSTTCCCCCEEEEECCTTCCEEEEEECTTTCEEEEE--ESSSSEEEEEETTS
T ss_pred hCcchhhceEEeeecCCCCCcceEEEeCCCCeEEEE--eccCCeEEEEeCCC
Confidence 11 12233332 22 556667786 66765555 56788999999764
No 377
>3of7_A Regulator of chromosome condensation; beta-propeller, guanine nucleotide exchange factor (GEF), GS histones, nucleus, cell cycle; 1.90A {Saccharomyces cerevisiae}
Probab=46.02 E-value=2.1e+02 Score=27.40 Aligned_cols=188 Identities=12% Similarity=0.092 Sum_probs=100.8
Q ss_pred cceeEeecCCCcEEEEEcCCeEEEEECCCC-Ce-----E----------------------------EeEe---cC---C
Q 014934 168 FYLNLVDWSSHNVLAVGLGNCVYLWNACSS-KV-----T----------------------------KLCD---LG---I 207 (415)
Q Consensus 168 ~~i~~l~ws~~~~la~~~d~~V~iwd~~~~-~~-----~----------------------------~~~~---~~---~ 207 (415)
..|..|+-.....++...++.|+.|-.... ++ . ..+. +. .
T Consensus 67 ~~i~~va~G~~Ht~alt~~G~v~~wG~n~~GqLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~v~~~~l~~~~~ 146 (473)
T 3of7_A 67 AKIISFAVGGMHTLALDEESNVWSWGCNDVGALGRDTSNAKEQLKDMDADDSSDDEDGDLNELESTPAKIPRESFPPLAE 146 (473)
T ss_dssp TCEEEEEECSSEEEEEETTCCEEEEECCTTSTTCSCCC---------------------CCHHHHSCEECCGGGCHHHHT
T ss_pred CCEEEEEeCCCeEEEEecCCeEEEeECCCCCCCCCCCcccccccccccccccCccccccccccccCceecccccCCcccC
Confidence 356677777777888889999999965331 10 0 0000 00 1
Q ss_pred CCCeEEEEEcCCCCeEEEEECCCcEEEEECC---CCe------------eeEEecC-CCccEEEEEeeCCEEEEEeCCCc
Q 014934 208 DDSVCSVGWANRNTHLAVGTSHGKVQIWDAS---RCK------------RVRTMEG-HRLRVGALAWSSSLLSSGSRDKS 271 (415)
Q Consensus 208 ~~~V~~v~~sp~g~~la~g~~dg~V~iwd~~---~~~------------~~~~l~~-h~~~V~~l~~~~~~l~sgs~dg~ 271 (415)
...|..|+.. ..+.++-+.+|.|..|-.. .++ .-..+.. ....|..|+......+.-..+|.
T Consensus 147 ~~~i~~va~G--~~hs~alt~~G~vy~wG~n~~~~GqLG~~~~~~~~~~~P~~v~~l~~~~i~~va~G~~hs~alt~~G~ 224 (473)
T 3of7_A 147 GHKVVQLAAT--DNMSCALFSNGEVYAWGTFRCNEGILGFYQDKIKIQKTPWKVPTFSKYNIVQLAPGKDHILFLDEEGM 224 (473)
T ss_dssp TCCEEEEEEC--SSEEEEEETTSCEEEEECEEETTEEEESBTTTBSCEEEEEECCCCCSSCEEEEEECSSEEEEEETTSC
T ss_pred CCcEEEEEcc--CCEEEEEeCCCeEEEeeCCcCCCCccCCCCCCCccccCcEEccccCCCCEEEEEecCCeEEEEeCCCe
Confidence 2345555543 3445555788899888641 111 0111111 12358888877777788889999
Q ss_pred EEEEECCCCCcc--------------EEEeccccCCeEEEEEeCCCCEEEEEeCCCcEEEEECCCC------------ce
Q 014934 272 ILQRDIRAQEDF--------------VSKLSGHKSEVCGLKWSYDNRELASGGNDNRLFVWNQHST------------QP 325 (415)
Q Consensus 272 I~iwd~~~~~~~--------------~~~~~~h~~~V~~l~~spdg~~lasg~~dg~I~iwd~~~~------------~~ 325 (415)
|+.|-.....++ ...+. ...|..|+.. ..+.+.-..+|.|+.|-.... ..
T Consensus 225 v~~wG~n~~GqLG~~~~~~~~~~~~~p~~~~--~~~v~~Ia~G--~~hs~alt~~G~v~~wG~n~~GqlG~~~~~~~~~~ 300 (473)
T 3of7_A 225 VFAWGNGQQNQLGRKVMERFRLKTLDPRPFG--LRHVKYIASG--ENHCFALTKDNKLVSWGLNQFGQCGVSEDVEDGAL 300 (473)
T ss_dssp EEEEECCTTSTTSSCCCGGGTTTTCSCEECS--CCSEEEEEEC--SSEEEEEETTSCEEEEEECTTSTTCCCSCCCTTCE
T ss_pred EEEEeCCCCCCCCCCccccccccccCceecC--CcceEEEecC--CCeEEEEecCCCEEEeCCCCCCCcCCCCcccCCce
Confidence 999976432211 01111 1345555443 344555567888888864321 11
Q ss_pred e---EEecc-CCCcEEEEEEcCCCCcEEEEEcCCCCCeEEEEECC
Q 014934 326 V---LKYCE-HTAAVKAIAWSPHLHGLLASGGGTADRCIRFWNTT 366 (415)
Q Consensus 326 ~---~~~~~-h~~~V~~l~~sp~~~~llasggg~~d~~I~iwd~~ 366 (415)
+ ..+.. ....|..|+.-.. ..++.. .+|.|..|-..
T Consensus 301 ~~~P~~v~~~~~~~i~~ia~G~~--hs~~lt---~~G~v~~wG~n 340 (473)
T 3of7_A 301 VTKPKRLALPDNVVIRSIAAGEH--HSLILS---QDGDLYSCGRL 340 (473)
T ss_dssp EEEEEECCCCTTCCEEEEEECSS--EEEEEE---TTSCEEEEEEC
T ss_pred eeccccccccCCccEEEEEeCCC--eEEEEe---CCCeEEEEECC
Confidence 1 11111 1235666665433 233333 58888888643
No 378
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=45.05 E-value=2.7e+02 Score=28.47 Aligned_cols=247 Identities=11% Similarity=0.090 Sum_probs=129.5
Q ss_pred CceeccCCCCCCC----cceeEee-cCC-CcEEEEEc--CC----eEEEEECCCCCeEEeEecCCCC--------CeEEE
Q 014934 155 PYKILDAPALQDD----FYLNLVD-WSS-HNVLAVGL--GN----CVYLWNACSSKVTKLCDLGIDD--------SVCSV 214 (415)
Q Consensus 155 p~~~ld~~~l~~~----~~i~~l~-ws~-~~~la~~~--d~----~V~iwd~~~~~~~~~~~~~~~~--------~V~~v 214 (415)
.+.+||...+..+ ..+..++ ++| ++.++++. +| .|+++|+.+++.+.-. +.... ....+
T Consensus 112 wevllD~d~l~~~~g~~~~~~g~~~~~~~~~~~~~~ls~~G~d~~~~~~~d~~t~~~~~~~-~~~~~k~~~~~~~~~~~~ 190 (711)
T 4hvt_A 112 WEVLIDFDKLSKKIGKKVAYRGVSNCFQNPNRYLISMSFGGKDEMFFREWDLEKKDFVKNG-FEPITNSGKLLEGKFTYP 190 (711)
T ss_dssp CEEEEEHHHHHHHHTSCEEEEEEEECSSSTTEEEEEEEETTCSEEEEEEEETTTTEECTTC-SCCBCTTCCBCCEETCCE
T ss_pred cEEEeccccccccCCCcEEEeceeecCCCCCEEEEEeCCCCCceeEEEEEECCcCCcCCCC-ccccccccccccccccee
Confidence 4667766555533 4556666 777 66666652 23 5999999998765311 01000 11345
Q ss_pred EEcCCCCeEEEEEC-----------CCcEEEEECCCC--eeeEEecCCCccE--EEEEe-eCC-----EEEEEeCC---C
Q 014934 215 GWANRNTHLAVGTS-----------HGKVQIWDASRC--KRVRTMEGHRLRV--GALAW-SSS-----LLSSGSRD---K 270 (415)
Q Consensus 215 ~~sp~g~~la~g~~-----------dg~V~iwd~~~~--~~~~~l~~h~~~V--~~l~~-~~~-----~l~sgs~d---g 270 (415)
+|. +++-+.++.. ...|+.|.+.+. +-...+.+....+ ..-.. ++. .+++.+.+ .
T Consensus 191 ~W~-d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Gt~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 269 (711)
T 4hvt_A 191 TWI-NKDTIIFNLVLHKNEITSSLYPNSLYIWKRGESIEKAKKLFEVPKEYIYVSAGKLLSDTISSSLIFISANKDFYNY 269 (711)
T ss_dssp EEE-ETTEEEECCCCSTTCBCTTSSBCEEEEEETTSCGGGCEEEEECCTTSCEEEEEESSCTTTCSSEEEEEEESSSSCE
T ss_pred eEE-CCCEEEEEeCCCCCCcCcCCCCCEEEEEECCCChHHCeEEeccCCCceEEEEEEecCCCceEEEEEEEEecccCce
Confidence 887 4444444421 235888887654 2233344333332 21111 133 34444322 3
Q ss_pred cEEEEECCCCCccEEEeccccCCeEEEEEeCCCCEEEEE----------eCCCcEEEEECCCCc-------eeEE-ec-c
Q 014934 271 SILQRDIRAQEDFVSKLSGHKSEVCGLKWSYDNRELASG----------GNDNRLFVWNQHSTQ-------PVLK-YC-E 331 (415)
Q Consensus 271 ~I~iwd~~~~~~~~~~~~~h~~~V~~l~~spdg~~lasg----------~~dg~I~iwd~~~~~-------~~~~-~~-~ 331 (415)
.+++.|..........+..... ..+..+.++.+++.. ...+.|.+.|+.++. .... +. .
T Consensus 270 ~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (711)
T 4hvt_A 270 DNYILDTKYKNLKLQKINMPSD--ATLQGSFKEYVFWLLRSDWKFKSHNIKAGSLVALHFTDLLKTESDKTSLKILFTPT 347 (711)
T ss_dssp EEEEEECSSSSCEEEECCSCTT--CEEEEEETTEEEEECSSCEEETTEEECTTCEEEEEGGGGGSCGGGCTTCEEEECCC
T ss_pred eEEEEcCCCCCCcceEeecCCc--ceEeeeECCEEEEEECcccccccccCCCCeEEEEECCcccccccccccceEEECCC
Confidence 4666676543322333332222 123345566665532 246779999987631 2222 32 2
Q ss_pred CCCcEEEEEEcCCCCcEEEEEcCCCCC--eEEEEECCCCc-EEEE-ee--CCCCEEEEEECCCCCeEEEEEecC--CCcE
Q 014934 332 HTAAVKAIAWSPHLHGLLASGGGTADR--CIRFWNTTTNT-HLSC-MD--TGSQVCNLVWSKNVNELVSTHGYS--QNQI 403 (415)
Q Consensus 332 h~~~V~~l~~sp~~~~llasggg~~d~--~I~iwd~~t~~-~~~~-~~--~~~~V~~l~~s~~~~~l~s~~g~~--dg~I 403 (415)
....+..+.|..+ .++++.. .++ .|.++|+.+++ .+.. +. ....+.....++++..++.+..+. -+.+
T Consensus 348 ~~~~l~~~~~~~~--~l~~~~~--~~~~~~l~~~~~~~g~~~~~~~i~lp~~~~~~~~~~~~~~~~~~~~~ss~~~P~~~ 423 (711)
T 4hvt_A 348 ANEVFNFISTTKD--RVFLATY--DNVVAKVVTFTLENEQWTKPVVLKLPYQNAIFGMSSYEEEEEALITIENSIVPPTI 423 (711)
T ss_dssp TTEEEEEEEECSS--CEEEEEE--ETTEEEEEEECEETTEECCCEEECCCSTTCEEEEECCTTCSCEEEEEECSSSCCEE
T ss_pred CCCeEEEEEEECC--EEEEEEE--ECCEEEEEEEECCCCceEEEeccCCCCCeEEEEEeecCcCCEEEEEEecCCCCCEE
Confidence 3345778888876 4666654 444 57788877664 2223 33 234677777778877666543332 3466
Q ss_pred EEEECC
Q 014934 404 IVWRYP 409 (415)
Q Consensus 404 ~vw~~~ 409 (415)
..++..
T Consensus 424 ~~~d~~ 429 (711)
T 4hvt_A 424 YLWVKT 429 (711)
T ss_dssp EEECTT
T ss_pred EEEeCC
Confidence 666654
No 379
>3mvd_K Regulator of chromosome condensation; protein-DNA complex, nucleosome core particle (NCP), NCP-CHR factor complex; HET: DNA; 2.90A {Drosophila melanogaster}
Probab=42.51 E-value=2.2e+02 Score=26.62 Aligned_cols=230 Identities=8% Similarity=0.029 Sum_probs=121.3
Q ss_pred eeEeecCCCcEEEEEcCCeEEEEECCC-CCe----------EEeEecCCCCCeEEEEEcCCCCeEEEEECCCcEEEEEC-
Q 014934 170 LNLVDWSSHNVLAVGLGNCVYLWNACS-SKV----------TKLCDLGIDDSVCSVGWANRNTHLAVGTSHGKVQIWDA- 237 (415)
Q Consensus 170 i~~l~ws~~~~la~~~d~~V~iwd~~~-~~~----------~~~~~~~~~~~V~~v~~sp~g~~la~g~~dg~V~iwd~- 237 (415)
+..|+-.....++...++.|+.|-... +++ ..-..+.....|..|+.. ..+.++-+.+|.|..|-.
T Consensus 77 v~~va~G~~h~~~l~~~G~v~~wG~n~~GqLG~~~~~~~~~~~P~~v~~~~~i~~va~G--~~hs~al~~~G~v~~wG~~ 154 (423)
T 3mvd_K 77 AVDISAGGMHNLVLTKSGDIYSFGCNDEGALGRDTSEDGSESKPDLIDLPGKALCISAG--DSHSACLLEDGRVFAWGSF 154 (423)
T ss_dssp EEEEEECSSEEEEEETTSCEEEEECCSSSTTCSCCCSTTSSSSCEECCCSSCEEEEEEC--SSEEEEEETTSCEEEEECE
T ss_pred ceEEeeCCCeEEEEeCCCeEEEeECCCCcCCCCCCcCCccccCCeEEcCCCCEEEEEcC--cCeEEEEeCCCeEEEEeCC
Confidence 455666667788888999999996533 110 000111122456655543 345555578999999975
Q ss_pred -CC-Ce---------eeEEecCCCccEEEEEeeCCEEEEEeCCCcEEEEECCCCCc----------------------cE
Q 014934 238 -SR-CK---------RVRTMEGHRLRVGALAWSSSLLSSGSRDKSILQRDIRAQED----------------------FV 284 (415)
Q Consensus 238 -~~-~~---------~~~~l~~h~~~V~~l~~~~~~l~sgs~dg~I~iwd~~~~~~----------------------~~ 284 (415)
.. ++ ...........|..|+......+.-..||.|+.|-.....+ +.
T Consensus 155 ~n~~GqlG~~~~~~~~~p~~~~~~~~i~~va~G~~hs~alt~~G~v~~wG~n~~GqLG~~~~~~~~~~~~~~~~~~~~p~ 234 (423)
T 3mvd_K 155 RDSHGNMGLTIDGNKRTPIDLMEGTVCCSIASGADHLVILTTAGKVFTVGCAEQGQLGRLSERSISGEGRRGKRDLLRPT 234 (423)
T ss_dssp ECSSSEEESBTTBCEEEEEESSTTCCEEEEEECSSEEEEEETTSCEEEEECCTTSTTSSCCTTTTTSCSTTTTTTTSSCE
T ss_pred CCCCCCcCcCCCCCCceeeEecCCCcEEEEecCCCeEEEEecCCeEEEeeCCcCCccCCCcccccccccccccccccCCe
Confidence 22 11 11111122346788887777777788999999996432211 11
Q ss_pred EEeccccCCeEEEEEeCCCCEEEEEeCCCcEEEEECCCC-----------ceeEEeccCCCcEEEEEEcCCCCcEEEEEc
Q 014934 285 SKLSGHKSEVCGLKWSYDNRELASGGNDNRLFVWNQHST-----------QPVLKYCEHTAAVKAIAWSPHLHGLLASGG 353 (415)
Q Consensus 285 ~~~~~h~~~V~~l~~spdg~~lasg~~dg~I~iwd~~~~-----------~~~~~~~~h~~~V~~l~~sp~~~~llasgg 353 (415)
.........|..++... ...++.-..++.|+.|-.... ............|..|+.-.. +.++..
T Consensus 235 ~v~~~~~~~v~~i~~g~-~~~~~~~~~~g~v~~wG~n~~gqlg~~~~~~~~~~~p~~~~~~~v~~ia~G~~--ht~alt- 310 (423)
T 3mvd_K 235 QLIITRAKPFEAIWATN-YCTFMRESQTQVIWATGLNNFKQLAHETKGKEFALTPIKTELKDIRHIAGGQH--HTVILT- 310 (423)
T ss_dssp EECCTTCCCEEEEEEET-TEEEEEETTTCCEEEEEECTTCTTSSCCTTCSEEEEEEEECCCSEEEEEECSS--EEEEEE-
T ss_pred EEeecCCccEEEEEECC-cEEEEEECCCCeEEEEeCCCCCcCCCCCCCCceeeeeEEcCCCCeEEEEcccC--eEEEEe-
Confidence 11111223455555442 222333357888888864321 001111111345666665433 334433
Q ss_pred CCCCCeEEEEECCCC---------c---EEEEeeC-CCCEEEEEECCCCCeEEEEEecCCCcEEEEECCCC
Q 014934 354 GTADRCIRFWNTTTN---------T---HLSCMDT-GSQVCNLVWSKNVNELVSTHGYSQNQIIVWRYPTM 411 (415)
Q Consensus 354 g~~d~~I~iwd~~t~---------~---~~~~~~~-~~~V~~l~~s~~~~~l~s~~g~~dg~I~vw~~~s~ 411 (415)
.|+.|..|-.... . ....+.. ...|..++.......++ ..+|.|+.|-....
T Consensus 311 --~~G~v~~wG~n~~GqLG~g~~~~~~~~p~~v~~l~~~v~~ia~G~~hs~al----t~~G~v~~wG~n~~ 375 (423)
T 3mvd_K 311 --TDLKCSVVGRPEYGRLGLGDVKDVVEKPTIVKKLTEKIVSVGCGEVCSYAV----TIDGKLYSWGSGVN 375 (423)
T ss_dssp --TTCCEEEEECCGGGTTCSSSCCSCEEEEEECTTCCSCEEEEEEETTEEEEE----ETTSCEEEEECCTT
T ss_pred --CCCcEEEEECCCCCCCCCCCccccccCceEeccCCCCEEEEEcCCCeEEEE----cCCCCEEEECCCCC
Confidence 5899999965321 1 1112221 22576666654433322 36889999976654
No 380
>1zi0_A DNA gyrase subunit A; beta pinwheel, topoisomerase, spiralling beta pinwheel, DNA wrapping, isomerase, DNA bindng protein; HET: DNA; 2.60A {Escherichia coli}
Probab=41.15 E-value=2e+02 Score=25.83 Aligned_cols=183 Identities=7% Similarity=0.030 Sum_probs=97.6
Q ss_pred CCCeEEEEECCCcEEEEECCCCeeeE---------EecCCCccEEEEEee-CCEEEEEeCCCcEEEEEC---CCCCc---
Q 014934 219 RNTHLAVGTSHGKVQIWDASRCKRVR---------TMEGHRLRVGALAWS-SSLLSSGSRDKSILQRDI---RAQED--- 282 (415)
Q Consensus 219 ~g~~la~g~~dg~V~iwd~~~~~~~~---------~l~~h~~~V~~l~~~-~~~l~sgs~dg~I~iwd~---~~~~~--- 282 (415)
+...+++.+.+|.|+--.+.+.+..+ .+..+..-+..+..+ .+.|+..+..|.++-... .....
T Consensus 2 ~e~~~v~~T~~G~iKr~~~~~~~~~~~~~~g~~~~~~ke~D~l~~~~~~~~~~~ll~fT~~G~~~~~~~~elp~~~~~a~ 81 (307)
T 1zi0_A 2 QEDVVVTLSHQGYVKYQPLSEYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDHILCFSSRGRVYSMKVYQLPEATRGAR 81 (307)
T ss_dssp CCEEEEEEETTSEEEEEECC--------------------CCEEEEEEEETTCEEEEEETTSEEEEEEGGGSCCCCSSSC
T ss_pred CCcEEEEEeCCCEEEEeeHHHhhhhccCCCCceeeeeCCCCEEEEEEEECCCCEEEEEECCCEEEEEEhhHCcCCCCCCC
Confidence 45567788899988777664422111 122233333333333 567888888888666544 32211
Q ss_pred --cEE---EeccccCCeEEEEEe---CCCCEEEEEeCCCcEEEEECCC-------CceeEEeccCCCcEEEEEEcCCCCc
Q 014934 283 --FVS---KLSGHKSEVCGLKWS---YDNRELASGGNDNRLFVWNQHS-------TQPVLKYCEHTAAVKAIAWSPHLHG 347 (415)
Q Consensus 283 --~~~---~~~~h~~~V~~l~~s---pdg~~lasg~~dg~I~iwd~~~-------~~~~~~~~~h~~~V~~l~~sp~~~~ 347 (415)
.+. .+. ....|.++..- .++.+++..+.+|.++-..+.. +.....+..+ ..+..+........
T Consensus 82 G~~i~~~l~l~-~~e~i~~~~~~~~~~~~~~ll~~T~~G~~Krt~l~e~~~~~r~G~~~i~l~~~-d~lv~~~~~~~~~~ 159 (307)
T 1zi0_A 82 GRPIVNLLPLE-QDERITAILPVTEFEEGVKVFMATANGTVKKTVLTEFNRLRTAGKVAIKLVDG-DELIGVDLTSGEDE 159 (307)
T ss_dssp CEEGGGTSCCC-TTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGTTCCTTCEESSCCCTT-CCEEEEEEECTTCE
T ss_pred CeEhhhccCCC-CCCEEEEEEEeccCCCCcEEEEEeCCCeEEEEEHHHhhccccCCeEEEEECCC-CEEEEEEEeCCCCE
Confidence 000 122 23346555432 3566889999999999887642 2122233344 45555555444444
Q ss_pred EEEEEcCCCCCeEEEEECCC---------CcEEEEeeCCCCEEEEEECCCCCeEEEEEecCCCcEEEEEC
Q 014934 348 LLASGGGTADRCIRFWNTTT---------NTHLSCMDTGSQVCNLVWSKNVNELVSTHGYSQNQIIVWRY 408 (415)
Q Consensus 348 llasggg~~d~~I~iwd~~t---------~~~~~~~~~~~~V~~l~~s~~~~~l~s~~g~~dg~I~vw~~ 408 (415)
+++.. .+|.+..++... |...-.+..+..|.++....++..|++ .+..|.++-.++
T Consensus 160 i~l~T---~~G~~irf~~~~v~~~gr~a~Gv~~i~L~~~d~Vv~~~~~~~~~~ll~--~T~~G~~Kr~~~ 224 (307)
T 1zi0_A 160 VMLFS---AEGKVVRFKESSVRAMGCNTTGVRGIRLGEGDKVVSLIVPRGDGAILT--ATQNGYGKRTAV 224 (307)
T ss_dssp EEEEE---TTSEEEEEEGGGSCBCCTTCCCEECCCCCTTCCEEEEECCCSSCEEEE--EETTSEEEEECG
T ss_pred EEEEC---CCCcEEEEEHHHcCccCCCCCCeEeEEeCCCCEEEEEEEecCCCEEEE--EEcCCceEEEEH
Confidence 55544 477777776632 222223345667777766555566666 456777776655
No 381
>4d9s_A UVB-resistance protein UVR8; UV resistance, UV-B photoreceptor, tryptophan chromophores, homodimer, COP1, chromatin-binding protein; 1.70A {Arabidopsis thaliana} PDB: 4dnw_A 4dnu_A 4dnv_A
Probab=37.47 E-value=2.6e+02 Score=26.03 Aligned_cols=229 Identities=10% Similarity=0.109 Sum_probs=119.3
Q ss_pred eeEeecCCCcEEEEEcCCeEEEEECCC-CC--------eEEeEec--CCCCCeEEEEEcCCCCeEEEEECC-CcEEEEEC
Q 014934 170 LNLVDWSSHNVLAVGLGNCVYLWNACS-SK--------VTKLCDL--GIDDSVCSVGWANRNTHLAVGTSH-GKVQIWDA 237 (415)
Q Consensus 170 i~~l~ws~~~~la~~~d~~V~iwd~~~-~~--------~~~~~~~--~~~~~V~~v~~sp~g~~la~g~~d-g~V~iwd~ 237 (415)
|..|+-.....++...++.|+.|-... ++ ...-..+ -....|..|+.. +.+.+.-..+ |.|..|-.
T Consensus 18 v~~ia~G~~hs~al~~~g~v~~wG~n~~GqLG~g~~~~~~~P~~v~~l~~~~i~~va~G--~~ht~al~~~gg~v~~wG~ 95 (406)
T 4d9s_A 18 VLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTCG--ADHTVAYSQSGMEVYSWGW 95 (406)
T ss_dssp EEEEEECSSEEEEEETTTEEEEEECCTTSTTCSSSCCCEEEEEECGGGTTSCEEEEEEC--SSEEEEEETTTTEEEEEEC
T ss_pred eEEEecCCCeEEEEEeCCEEEEEeCCCCCCCCCCCcccCcCCEEecccCCCCEEEEEeC--cceEEEEECCCCEEEEEcC
Confidence 555666667778888899999996543 11 0111111 112356666543 3333333455 48999954
Q ss_pred CCC---------e--eeEEec-CCCccEEEEEeeCCEEEEEeCCCcEEEEECCCCCc----------cEEEeccc-cCCe
Q 014934 238 SRC---------K--RVRTME-GHRLRVGALAWSSSLLSSGSRDKSILQRDIRAQED----------FVSKLSGH-KSEV 294 (415)
Q Consensus 238 ~~~---------~--~~~~l~-~h~~~V~~l~~~~~~l~sgs~dg~I~iwd~~~~~~----------~~~~~~~h-~~~V 294 (415)
... . ....+. .....|..|+......+.-..||.|+.|-.....+ ....+... ...|
T Consensus 96 n~~GqLG~g~~~~~~~p~~v~~l~~~~i~~ia~G~~h~~alt~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~~~~~~i 175 (406)
T 4d9s_A 96 GDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRI 175 (406)
T ss_dssp CGGGTTCSSSCCCEEEEEECGGGTTCCEEEEEECSSEEEEEETTSCEEEEECCTTSTTCSSSCCCEEEEEECGGGTTCCE
T ss_pred CCCcCCCCCCCCccccceEecccCCCCEEEEEEChhheEEEcCCCcEEEeCCCCCccCCCCCCCCcccceEecccCCCcE
Confidence 221 0 011111 12336888887777777788999999997543221 01112111 1245
Q ss_pred EEEEEeCCCCEEEEEeCCCcEEEEECCCC-c---------ee-EEecc-CCCcEEEEEEcCCCCcEEEEEcCCCCCeEEE
Q 014934 295 CGLKWSYDNRELASGGNDNRLFVWNQHST-Q---------PV-LKYCE-HTAAVKAIAWSPHLHGLLASGGGTADRCIRF 362 (415)
Q Consensus 295 ~~l~~spdg~~lasg~~dg~I~iwd~~~~-~---------~~-~~~~~-h~~~V~~l~~sp~~~~llasggg~~d~~I~i 362 (415)
..++.. ..+.+.-..||.|+.|-.... + .. ..+.. ....|..++.-.. +.++.. .++.|+.
T Consensus 176 ~~va~G--~~hs~alt~~G~v~~wG~n~~GqlG~g~~~~~~~p~~v~~~~~~~i~~va~G~~--ht~~l~---~~G~v~~ 248 (406)
T 4d9s_A 176 KMVAAG--AEHTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKMSMVACGWR--HTISVS---YSGALYT 248 (406)
T ss_dssp EEEEEC--SSEEEEEETTSCEEEEECCTTSTTCSSSSCCEEEEEECCCSTTCCEEEEEECSS--EEEEEE---TTCCEEE
T ss_pred EEEecC--CCeEEEEeCCCCEEEeeCCCCCCCCCCCCCCcCccEEecccCCceEEEEEECCC--cEEEEc---CCCCEEE
Confidence 555543 445566678899999964321 0 01 11111 1245666665433 234433 5888999
Q ss_pred EECCCC-c----------EEEEee--CCCCEEEEEECCCCCeEEEEEecCCCcEEEEECCCC
Q 014934 363 WNTTTN-T----------HLSCMD--TGSQVCNLVWSKNVNELVSTHGYSQNQIIVWRYPTM 411 (415)
Q Consensus 363 wd~~t~-~----------~~~~~~--~~~~V~~l~~s~~~~~l~s~~g~~dg~I~vw~~~s~ 411 (415)
|-.... + ....+. ....|..++-......++ ..||.|+.|-....
T Consensus 249 wG~n~~GqlG~g~~~~~~~p~~v~~~~~~~v~~i~~G~~hs~al----t~~G~v~~wG~n~~ 306 (406)
T 4d9s_A 249 YGWSKYGQLGHGDLEDHLIPHKLEALSNSFISQISGGWRHTMAL----TSDGKLYGWGWNKF 306 (406)
T ss_dssp EECCTTSTTCSSSCCCEEEEEECGGGTTSCEEEEEECSSEEEEE----ETTSCEEEEECCTT
T ss_pred eeCCCCCCCCCCCCcCccccEEecccCCCCEEEEEecCCEEEEE----cCCCeEEEeeCCCC
Confidence 865431 1 111111 233466665544332222 36788888876543
No 382
>1wp5_A Topoisomerase IV; broken beta-propeller, hairpin-invaded beta-propeller, six- bladed beta-propeller; 1.79A {Geobacillus stearothermophilus} SCOP: b.68.10.1
Probab=34.03 E-value=2.7e+02 Score=25.23 Aligned_cols=156 Identities=9% Similarity=-0.007 Sum_probs=90.3
Q ss_pred CCCcceeEeecCC-CcEEEEEcCCeEEEEECCC---------CCe-EEeEecCCCCCeEEEEEcCC---CCeEEEEECCC
Q 014934 165 QDDFYLNLVDWSS-HNVLAVGLGNCVYLWNACS---------SKV-TKLCDLGIDDSVCSVGWANR---NTHLAVGTSHG 230 (415)
Q Consensus 165 ~~~~~i~~l~ws~-~~~la~~~d~~V~iwd~~~---------~~~-~~~~~~~~~~~V~~v~~sp~---g~~la~g~~dg 230 (415)
.+|+.+..+.-+. +.++.....|.++-+.... |.. ...+.+...+.|.++....+ +.+++..+.+|
T Consensus 37 e~D~l~~~~~~~t~d~ll~fT~~Gr~~~~~~~elp~~~r~a~G~~i~~~i~L~~~e~Iv~~~~~~~~~~~~~ll~~T~~G 116 (323)
T 1wp5_A 37 DTDRLLAMLEMNTKDVLLLFTNKGNYLYCPVHELPDIRWKDLGQHIANIIPIDRDEEIIKAIPINDFELNGYFLFVTRNG 116 (323)
T ss_dssp TTCCEEEEEEEETTSEEEEEETTSEEEEEEGGGSCBCCTTSCCEEGGGTSCCCTTCCEEEEEEESCTTSSCEEEEEETTS
T ss_pred CCCEEEEEEEECCCCEEEEEECCCEEEEEEHHHCcCCCCCCCCcChhhccCCCCCCEEEEEEEecccCCCceEEEEeCCC
Confidence 3455555555555 7788888888877766522 211 12233444566776544332 66788999999
Q ss_pred cEEEEECCC--------CeeeEEecCCCccEEEEEe-e-CCEEEEEeCCCcEEEEECCCCC------ccEEEec-cccCC
Q 014934 231 KVQIWDASR--------CKRVRTMEGHRLRVGALAW-S-SSLLSSGSRDKSILQRDIRAQE------DFVSKLS-GHKSE 293 (415)
Q Consensus 231 ~V~iwd~~~--------~~~~~~l~~h~~~V~~l~~-~-~~~l~sgs~dg~I~iwd~~~~~------~~~~~~~-~h~~~ 293 (415)
.++-..+.. +.....+... ..+..+.. + .+.++..+.+|.+..+....-. .-+..+. .....
T Consensus 117 ~iKrt~l~e~~~~~r~~G~~ai~l~e~-d~lv~~~~~~~~~~i~l~T~~G~~irf~~~ev~~~gR~a~GV~~i~L~~~d~ 195 (323)
T 1wp5_A 117 MVKKTELKHYKAQRYSKPLTGINLKND-DQVVDVHLTDGMNELFLVTHNGYALWFDESEVSIVGVRAAGVKGMNLKEGDY 195 (323)
T ss_dssp EEEEEEGGGGCCSCCSSCEECSCCCTT-CCEEEEEEECSCSEEEEEETTSEEEEEEGGGSCBCCSSCCCEECCCCCTTCC
T ss_pred eEEEeEHHHhhhccccCceEEEEeCCC-CEEEEEEEeCCCCEEEEEeCCCcEEEEEHHHCcccCCCCcCEEEEEeCCCCE
Confidence 999988742 2111123322 34444333 3 4678889999998888764211 0111111 12345
Q ss_pred eEEEEEeCCCC-EEEEEeCCCcEEEEECC
Q 014934 294 VCGLKWSYDNR-ELASGGNDNRLFVWNQH 321 (415)
Q Consensus 294 V~~l~~spdg~-~lasg~~dg~I~iwd~~ 321 (415)
|.++..-+++. .|++.+..|..+..++.
T Consensus 196 Vv~~~~~~~~~~~ll~vt~~G~gKr~~~~ 224 (323)
T 1wp5_A 196 IVSGQLITSKDESIVVATQRGAVKKMKLT 224 (323)
T ss_dssp EEEEEEECCTTCEEEEEETTSEEEEEEGG
T ss_pred EEEEEEEcCCCcEEEEEECCCceEEEEHH
Confidence 66665444455 78888888888777764
No 383
>3kci_A Probable E3 ubiquitin-protein ligase HERC2; WD40, RCC1, structural genomics consortium, SGC, coiled coil, metal-binding, phosphoprotein; 1.80A {Homo sapiens}
Probab=33.34 E-value=2.9e+02 Score=25.43 Aligned_cols=152 Identities=12% Similarity=0.155 Sum_probs=86.3
Q ss_pred ceeEeecCCCcEEEEEcCCeEEEEECCC-CC--------eE--EeEecCCCCCeEEEEEcCCCCeEEEEECCCcEEEEEC
Q 014934 169 YLNLVDWSSHNVLAVGLGNCVYLWNACS-SK--------VT--KLCDLGIDDSVCSVGWANRNTHLAVGTSHGKVQIWDA 237 (415)
Q Consensus 169 ~i~~l~ws~~~~la~~~d~~V~iwd~~~-~~--------~~--~~~~~~~~~~V~~v~~sp~g~~la~g~~dg~V~iwd~ 237 (415)
.+..++-.....++...++.|+.|-... ++ .. .....-....|..|+......+.++-..+|.|..|-.
T Consensus 160 ~i~~va~G~~hs~alt~~G~v~~wG~n~~GqLG~~~~~~~~~p~~v~~~~~~~v~~ia~G~g~~~t~~l~~~G~v~~wG~ 239 (389)
T 3kci_A 160 EVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGD 239 (389)
T ss_dssp CEEEEEECSSEEEEEETTSCEEEEECCGGGTTCSSSCCCEEEEEECGGGTTSCEEEEEECCSSCEEEEEETTTEEEEEEC
T ss_pred eEEEEEeCcCeEEEEeCCCeEEEeCCCCCCCcCCCCCcccccceEecccCCCeEEEEEEcCCCcEEEEEccCCEEEEEeC
Confidence 3556666667778888899999997532 11 11 1111112345666665443356666688999999964
Q ss_pred CCC-----------eeeEEecC-CCccEEEEEeeCCEEEEEeCCCcEEEEECCCCCc----------cEEEeccc-cCCe
Q 014934 238 SRC-----------KRVRTMEG-HRLRVGALAWSSSLLSSGSRDKSILQRDIRAQED----------FVSKLSGH-KSEV 294 (415)
Q Consensus 238 ~~~-----------~~~~~l~~-h~~~V~~l~~~~~~l~sgs~dg~I~iwd~~~~~~----------~~~~~~~h-~~~V 294 (415)
... .....+.. ....|..++......+.-..||.|+.|-.....+ ....+..- ...|
T Consensus 240 n~~GqLG~g~~~~~~~p~~v~~~~~~~v~~v~~G~~hs~alt~~G~v~~wG~n~~GqLG~g~~~~~~~P~~v~~l~~~~v 319 (389)
T 3kci_A 240 GDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKV 319 (389)
T ss_dssp CGGGTTSSSSCCCEEEEEECGGGTTSCEEEEEEETTEEEEEETTSCEEEEECCGGGTTCSSSCCCEEEEEECGGGTTCCE
T ss_pred CCCCCCCCCCCCCccccEEecccCCCcEEEEeCCCCEEEEEeCCCeEEEEeCCCCCCCCCCCCccccCCeEeccCCCCCE
Confidence 321 11111221 2235777777777777778999999997643110 01111111 1345
Q ss_pred EEEEEeCCCCEEEEEeCCCcEEEEECCC
Q 014934 295 CGLKWSYDNRELASGGNDNRLFVWNQHS 322 (415)
Q Consensus 295 ~~l~~spdg~~lasg~~dg~I~iwd~~~ 322 (415)
..++.. ..+.+....||.|+.|=...
T Consensus 320 ~~ia~G--~~h~~al~~~G~v~~wG~n~ 345 (389)
T 3kci_A 320 IAIATG--SLHCVCCTEDGEVYTWGDND 345 (389)
T ss_dssp EEEEEC--SSEEEEEETTCCEEEEECCT
T ss_pred EEEEec--cCeEEEECCCCCEEEeeCCC
Confidence 555543 34455557888999997653
No 384
>1zvu_A Topoisomerase IV subunit A; beta-pinwheel, ATPase, supercoiling, decatenation, DNA bindi topology; 3.00A {Escherichia coli}
Probab=30.11 E-value=3.4e+02 Score=27.69 Aligned_cols=115 Identities=14% Similarity=0.097 Sum_probs=69.6
Q ss_pred CCCcceeEeecCC-CcEEEEEcCCeEEEEECCC---C----C-eEEeEecCCCCCeEEEEEcCCCCeEEEEECCCcEEEE
Q 014934 165 QDDFYLNLVDWSS-HNVLAVGLGNCVYLWNACS---S----K-VTKLCDLGIDDSVCSVGWANRNTHLAVGTSHGKVQIW 235 (415)
Q Consensus 165 ~~~~~i~~l~ws~-~~~la~~~d~~V~iwd~~~---~----~-~~~~~~~~~~~~V~~v~~sp~g~~la~g~~dg~V~iw 235 (415)
.+|+....+.-+. +.+|.....|.+|-..+.. + + +..++.+.....|.++.-..++.+++.++..|.|+.-
T Consensus 501 ~~D~~~~~~~~~t~d~ll~ft~~Gr~y~~~~~~lP~~~~~G~~i~~ll~l~~~e~i~~~~~~~~~~~l~~~T~~G~vk~~ 580 (716)
T 1zvu_A 501 AGDSFKAAVKGKSNQPVVFVDSTGRSYAIDPITLPSARGQGEPLTGKLTLPPGATVDHMLMESDDQKLLMASDAGYGFVC 580 (716)
T ss_dssp ----CCEEECCCSSSCEEEEETTSEEEEECTTTSCCCC---CBSTTTSCCCTTCCEEEEECCCTTCEEEEEBTTSEEEEE
T ss_pred CCCeEEEEEEecCCCEEEEEecCCcEEEEEeeecccccccCeeHHhccCCCCCCeEEEEEEecCCceEEEEeCCceEEEe
Confidence 3455444444444 7788888888877665432 1 1 1122333455677777665677889999999999988
Q ss_pred ECCC-------CeeeEEecCCCccEEEEEe-e-CCEEEEEeCCCcEEEEECCC
Q 014934 236 DASR-------CKRVRTMEGHRLRVGALAW-S-SSLLSSGSRDKSILQRDIRA 279 (415)
Q Consensus 236 d~~~-------~~~~~~l~~h~~~V~~l~~-~-~~~l~sgs~dg~I~iwd~~~ 279 (415)
.+.. +...-.+.....-|..... + .+.++..+.+|.+..++...
T Consensus 581 ~l~~~~~~~~~g~~ai~L~~~d~lv~~~~~~~~~~~v~l~t~~g~~lrf~~~~ 633 (716)
T 1zvu_A 581 TFNDLVARNRAGKALITLPENAHVMPPVVIEDASDMLLAITQAGRMLMFPVSD 633 (716)
T ss_dssp EGGGGCCCSTTCEECBCCCTTCCBCCCEECCCTTCEEEEEETTSEEEEEESTT
T ss_pred cHHHhcccCccceEEEeeCCCCEEEEEEEecCCCCEEEEEeCCCeEEEEEHHH
Confidence 7643 2233334433333433333 2 46788899999999998754
No 385
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=25.41 E-value=3.9e+02 Score=24.35 Aligned_cols=166 Identities=11% Similarity=0.032 Sum_probs=82.6
Q ss_pred CeEEEEECCCcEEEEECCC-CeeeEEe--cCCCccEEEEEee---CCEEEEEeCCC----cEEEEECCCCCccEEEecc-
Q 014934 221 THLAVGTSHGKVQIWDASR-CKRVRTM--EGHRLRVGALAWS---SSLLSSGSRDK----SILQRDIRAQEDFVSKLSG- 289 (415)
Q Consensus 221 ~~la~g~~dg~V~iwd~~~-~~~~~~l--~~h~~~V~~l~~~---~~~l~sgs~dg----~I~iwd~~~~~~~~~~~~~- 289 (415)
..|.+|+..| +.+++... ++....+ ......|.+|+++ +..|.+++..| .|...+ ..+.. ...+..
T Consensus 23 g~l~vgt~~G-l~~~~~~~~g~~W~~~~~~~~~~~v~~i~~dp~~~~~l~~g~~~g~~g~gl~~s~-D~G~t-W~~~~~~ 99 (394)
T 3b7f_A 23 VMLLVATIKG-AWFLASDPARRTWELRGPVFLGHTIHHIVQDPREPERMLMAARTGHLGPTVFRSD-DGGGN-WTEATRP 99 (394)
T ss_dssp CEEEEEETTE-EEEEEECTTSCSEEEEEEESTTSEEEEEEECSSSTTCEEEEEEC--CCEEEEEES-STTSC-CEECSBC
T ss_pred CEEEEEecCc-eEEEECCCCCCCceECCccCCCCceEEEEECCCCCCeEEEEecCCCCCccEEEeC-CCCCC-ceECCcc
Confidence 4677888887 55555432 2222211 1234579999997 45666666665 454432 22221 111110
Q ss_pred -------------ccCCeEEEEEeC-C-CCEEEEEeCCCcEEEEECCCCceeEEecc-------------------CCCc
Q 014934 290 -------------HKSEVCGLKWSY-D-NRELASGGNDNRLFVWNQHSTQPVLKYCE-------------------HTAA 335 (415)
Q Consensus 290 -------------h~~~V~~l~~sp-d-g~~lasg~~dg~I~iwd~~~~~~~~~~~~-------------------h~~~ 335 (415)
+...|.+|++.| + ...|..++..+.|...+- .++.-..+.. ....
T Consensus 100 ~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~l~~g~~~ggl~~S~D-gG~tW~~~~~~~~~p~~~~~~~~~~~g~~~~~~ 178 (394)
T 3b7f_A 100 PAFNKAPEGETGRVVDHVFWLTPGHASEPGTWYAGTSPQGLFRSTD-HGASWEPVAGFNDHPMRRAWTGGEQDGTPDGPK 178 (394)
T ss_dssp CCCCCCC----CCCCCEEEEEEECCTTSTTCEEEEEETTEEEEESS-TTSBCEECHHHHTCTTHHHHHCCC----CCCCE
T ss_pred ccCCCcccccccccccceeEEEeCCCCCCCEEEEEecCCcEEEEcC-CCCCeEECcCccCCccccccccccccCCCCCCc
Confidence 112477889987 2 455555555565655432 2222222211 1235
Q ss_pred EEEEEEcCCC-CcEEEEEcCCCCCeEEEEECCCCcEEEEeeC--------------CCCEEEEEECCC-CCeEEE
Q 014934 336 VKAIAWSPHL-HGLLASGGGTADRCIRFWNTTTNTHLSCMDT--------------GSQVCNLVWSKN-VNELVS 394 (415)
Q Consensus 336 V~~l~~sp~~-~~llasggg~~d~~I~iwd~~t~~~~~~~~~--------------~~~V~~l~~s~~-~~~l~s 394 (415)
+.+|.+.|.. ..+++... ++.|... ...|+....+.. +..+..+.+++. ...|.+
T Consensus 179 i~~i~~d~~~~~~l~vg~~---~ggl~~s-~DgG~tW~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l~v 249 (394)
T 3b7f_A 179 MHSILVDPRDPKHLYIGMS---SGGVFES-TDAGTDWKPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQ 249 (394)
T ss_dssp EEEEEECTTCTTCEEEEEE---TBEEEEE-SSTTSSCEECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEEEE
T ss_pred eeEEEECCCCCCEEEEEEC---CCCEEEE-CCCCCCceECCCCccccccCCCccccCcceeEEEECCCCCCEEEE
Confidence 7899999853 34555432 3433332 222333333221 134888999886 345555
No 386
>4d9s_A UVB-resistance protein UVR8; UV resistance, UV-B photoreceptor, tryptophan chromophores, homodimer, COP1, chromatin-binding protein; 1.70A {Arabidopsis thaliana} PDB: 4dnw_A 4dnu_A 4dnv_A
Probab=24.20 E-value=4.3e+02 Score=24.43 Aligned_cols=230 Identities=12% Similarity=0.124 Sum_probs=121.9
Q ss_pred ceeEeecCCCcEEEEEcCC-eEEEEECCCC---------CeEEeEec--CCCCCeEEEEEcCCCCeEEEEECCCcEEEEE
Q 014934 169 YLNLVDWSSHNVLAVGLGN-CVYLWNACSS---------KVTKLCDL--GIDDSVCSVGWANRNTHLAVGTSHGKVQIWD 236 (415)
Q Consensus 169 ~i~~l~ws~~~~la~~~d~-~V~iwd~~~~---------~~~~~~~~--~~~~~V~~v~~sp~g~~la~g~~dg~V~iwd 236 (415)
.+..++......++...++ .|+.|-.... ....-..+ -....|..|+. ...+.++-+.+|.|..|-
T Consensus 69 ~i~~va~G~~ht~al~~~gg~v~~wG~n~~GqLG~g~~~~~~~p~~v~~l~~~~i~~ia~--G~~h~~alt~~G~v~~wG 146 (406)
T 4d9s_A 69 QIVSVTCGADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIAC--GDSHCLAVTMEGEVQSWG 146 (406)
T ss_dssp CEEEEEECSSEEEEEETTTTEEEEEECCGGGTTCSSSCCCEEEEEECGGGTTCCEEEEEE--CSSEEEEEETTSCEEEEE
T ss_pred CEEEEEeCcceEEEEECCCCEEEEEcCCCCcCCCCCCCCccccceEecccCCCCEEEEEE--ChhheEEEcCCCcEEEeC
Confidence 4666776666777777664 9999964321 11111111 11235666654 344555567899999996
Q ss_pred CCCCe-----------eeEEecC-CCccEEEEEeeCCEEEEEeCCCcEEEEECCCCCc----------cEEEecc-ccCC
Q 014934 237 ASRCK-----------RVRTMEG-HRLRVGALAWSSSLLSSGSRDKSILQRDIRAQED----------FVSKLSG-HKSE 293 (415)
Q Consensus 237 ~~~~~-----------~~~~l~~-h~~~V~~l~~~~~~l~sgs~dg~I~iwd~~~~~~----------~~~~~~~-h~~~ 293 (415)
..... ....+.. ....|..++......+.-..||.|+.|-.....+ ....+.. ....
T Consensus 147 ~n~~GqLG~g~~~~~~~p~~v~~~~~~~i~~va~G~~hs~alt~~G~v~~wG~n~~GqlG~g~~~~~~~p~~v~~~~~~~ 226 (406)
T 4d9s_A 147 RNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEK 226 (406)
T ss_dssp CCTTSTTCSSSCCCEEEEEECGGGTTCCEEEEEECSSEEEEEETTSCEEEEECCTTSTTCSSSSCCEEEEEECCCSTTCC
T ss_pred CCCCccCCCCCCCCcccceEecccCCCcEEEEecCCCeEEEEeCCCCEEEeeCCCCCCCCCCCCCCcCccEEecccCCce
Confidence 53211 1111221 1236777877777777788999999997543221 0111111 1234
Q ss_pred eEEEEEeCCCCEEEEEeCCCcEEEEECCCC-c----------eeEEecc-CCCcEEEEEEcCCCCcEEEEEcCCCCCeEE
Q 014934 294 VCGLKWSYDNRELASGGNDNRLFVWNQHST-Q----------PVLKYCE-HTAAVKAIAWSPHLHGLLASGGGTADRCIR 361 (415)
Q Consensus 294 V~~l~~spdg~~lasg~~dg~I~iwd~~~~-~----------~~~~~~~-h~~~V~~l~~sp~~~~llasggg~~d~~I~ 361 (415)
|..++.. ..+.+.-..+|.|+.|-.... + ....+.. ....|..|+.-.. +.++.. .|+.|.
T Consensus 227 i~~va~G--~~ht~~l~~~G~v~~wG~n~~GqlG~g~~~~~~~p~~v~~~~~~~v~~i~~G~~--hs~alt---~~G~v~ 299 (406)
T 4d9s_A 227 MSMVACG--WRHTISVSYSGALYTYGWSKYGQLGHGDLEDHLIPHKLEALSNSFISQISGGWR--HTMALT---SDGKLY 299 (406)
T ss_dssp EEEEEEC--SSEEEEEETTCCEEEEECCTTSTTCSSSCCCEEEEEECGGGTTSCEEEEEECSS--EEEEEE---TTSCEE
T ss_pred EEEEEEC--CCcEEEEcCCCCEEEeeCCCCCCCCCCCCcCccccEEecccCCCCEEEEEecCC--EEEEEc---CCCeEE
Confidence 5555443 344555567888998875321 0 0111111 2234666655433 344433 588999
Q ss_pred EEECCC-Cc--------E--EEEee--CCCCEEEEEECCCCCeEEEEEecCCCcEEEEECCCC
Q 014934 362 FWNTTT-NT--------H--LSCMD--TGSQVCNLVWSKNVNELVSTHGYSQNQIIVWRYPTM 411 (415)
Q Consensus 362 iwd~~t-~~--------~--~~~~~--~~~~V~~l~~s~~~~~l~s~~g~~dg~I~vw~~~s~ 411 (415)
.|-... |+ . ...+. ....|..++...... ++. ..+|.|+.|-....
T Consensus 300 ~wG~n~~GqLG~g~~~~~~~p~~v~~~~~~~v~~va~G~~hs-~al---t~~G~v~~wG~n~~ 358 (406)
T 4d9s_A 300 GWGWNKFGQVGVGNNLDQCSPVQVRFPDDQKVVQVSCGWRHT-LAV---TERNNVFAWGRGTN 358 (406)
T ss_dssp EEECCTTSTTCSSSSSCEEEEEEECCGGGCCEEEEEECSSEE-EEE---ETTSCEEEEECCTT
T ss_pred EeeCCCCCCCCCCCCCCCccCEEEeccCCCcEEEEEeCCCeE-EEE---eCCCCEEEecCCCC
Confidence 996543 11 0 11111 234566666554433 222 36888999976554
Done!