Query         014934
Match_columns 415
No_of_seqs    676 out of 3520
Neff          9.1 
Searched_HMMs 13730
Date          Mon Mar 25 03:44:17 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014934.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/014934hhsearch_scop -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 d1nr0a1 b.69.4.1 (A:2-312) Act 100.0 5.1E-35 3.7E-39  275.9  34.0  237  170-413    20-272 (311)
  2 d1gxra_ b.69.4.1 (A:) Groucho/ 100.0 5.6E-34 4.1E-38  270.8  36.7  243  165-414    49-300 (337)
  3 d1nr0a1 b.69.4.1 (A:2-312) Act 100.0 1.9E-33 1.4E-37  265.1  34.4  234  168-409    59-311 (311)
  4 d1gxra_ b.69.4.1 (A:) Groucho/ 100.0 1.3E-32 9.5E-37  261.2  38.5  234  167-408    97-335 (337)
  5 d1tbga_ b.69.4.1 (A:) beta1-su 100.0 3.7E-32 2.7E-36  255.0  39.9  233  168-407    56-340 (340)
  6 d1vyhc1 b.69.4.1 (C:92-408) Pl 100.0 1.6E-32 1.2E-36  253.5  35.1  233  168-407    18-317 (317)
  7 d1k8kc_ b.69.4.1 (C:) Arp2/3 c 100.0 2.1E-32 1.5E-36  263.5  32.0  236  169-410     9-273 (371)
  8 d1erja_ b.69.4.1 (A:) Tup1, C- 100.0 2.5E-31 1.8E-35  255.3  35.9  242  167-414    62-343 (388)
  9 d1erja_ b.69.4.1 (A:) Tup1, C- 100.0 1.6E-30 1.2E-34  249.7  34.9  240  165-410   119-387 (388)
 10 d1nr0a2 b.69.4.1 (A:313-611) A 100.0   1E-29 7.3E-34  235.9  30.1  236  167-409    12-298 (299)
 11 d1k8kc_ b.69.4.1 (C:) Arp2/3 c 100.0 1.5E-29 1.1E-33  243.4  28.4  241  168-414    52-364 (371)
 12 d1vyhc1 b.69.4.1 (C:92-408) Pl 100.0 8.8E-29 6.4E-33  228.1  31.7  204  206-414    15-282 (317)
 13 d2ovrb2 b.69.4.1 (B:2365-2706) 100.0 6.4E-28 4.7E-32  225.0  37.1  241  154-410     7-340 (342)
 14 d1pgua1 b.69.4.1 (A:2-326) Act 100.0   3E-29 2.2E-33  237.2  28.1  235  168-408    64-325 (325)
 15 d1tbga_ b.69.4.1 (A:) beta1-su 100.0   3E-28 2.2E-32  228.0  34.2  208  201-414    49-305 (340)
 16 d1pgua1 b.69.4.1 (A:2-326) Act 100.0 3.5E-28 2.5E-32  229.7  31.0  239  170-413    20-285 (325)
 17 d1nexb2 b.69.4.1 (B:370-744) C 100.0 2.2E-27 1.6E-31  222.6  35.2  234  169-414    15-316 (355)
 18 d1nr0a2 b.69.4.1 (A:313-611) A 100.0 8.9E-28 6.5E-32  222.6  28.6  210  197-412     2-257 (299)
 19 d1p22a2 b.69.4.1 (A:253-545) F 100.0 1.2E-26 8.5E-31  211.5  32.0  225  168-407    16-293 (293)
 20 d1sq9a_ b.69.4.1 (A:) Antivira 100.0 1.3E-26 9.5E-31  224.4  26.9  241  168-414    15-324 (393)
 21 d1pgua2 b.69.4.1 (A:327-613) A  99.9 2.8E-26   2E-30  211.3  26.8  226  168-408    14-286 (287)
 22 d2ovrb2 b.69.4.1 (B:2365-2706)  99.9 8.3E-26   6E-30  210.5  28.7  210  192-414     1-293 (342)
 23 d1k32a3 b.69.9.1 (A:320-679) T  99.9 6.5E-25 4.7E-29  207.2  29.0  185  172-365     7-207 (360)
 24 d1yfqa_ b.69.4.2 (A:) Cell cyc  99.9 6.8E-25 4.9E-29  203.7  26.8  242  169-414    13-286 (342)
 25 d1nexb2 b.69.4.1 (B:370-744) C  99.9 1.3E-24 9.2E-29  203.5  27.5  228  168-407    54-351 (355)
 26 d1p22a2 b.69.4.1 (A:253-545) F  99.9 1.2E-23 8.7E-28  191.3  28.9  192  206-410    13-247 (293)
 27 d1sq9a_ b.69.4.1 (A:) Antivira  99.9 6.7E-24 4.9E-28  205.1  26.0  194  179-375    80-328 (393)
 28 d1l0qa2 b.69.2.3 (A:1-301) Sur  99.9 1.1E-21 7.9E-26  180.2  32.8  225  184-414     9-279 (301)
 29 d1pgua2 b.69.4.1 (A:327-613) A  99.9   1E-21 7.6E-26  180.2  25.1  189  169-365    82-286 (287)
 30 d1hzua2 b.70.2.1 (A:118-543) C  99.9 9.1E-22 6.6E-26  192.3  25.3  234  177-413    30-400 (426)
 31 d1pbyb_ b.69.2.2 (B:) Quinohem  99.9 6.3E-21 4.6E-25  177.5  29.2  224  180-414     4-314 (337)
 32 d1yfqa_ b.69.4.2 (A:) Cell cyc  99.9 1.2E-21 8.4E-26  181.5  22.0  236  168-408    57-321 (342)
 33 d1k32a3 b.69.9.1 (A:320-679) T  99.9 2.1E-21 1.5E-25  182.8  23.1  192  213-411     7-210 (360)
 34 d1jmxb_ b.69.2.2 (B:) Quinohem  99.8   3E-19 2.2E-23  166.6  26.8  235  173-414     2-326 (346)
 35 d1qksa2 b.70.2.1 (A:136-567) C  99.8 4.5E-17 3.3E-21  159.2  29.7  227  178-410    31-286 (432)
 36 d1qksa2 b.70.2.1 (A:136-567) C  99.8 2.3E-17 1.7E-21  161.3  24.0  189  221-413    33-241 (432)
 37 d2madh_ b.69.2.1 (H:) Methylam  99.8 4.7E-16 3.4E-20  147.2  32.1  238  169-414    22-354 (373)
 38 d1ri6a_ b.69.11.1 (A:) Putativ  99.8 1.1E-16 8.1E-21  148.5  24.8  227  180-409     6-306 (333)
 39 d1l0qa2 b.69.2.3 (A:1-301) Sur  99.7 9.3E-15 6.8E-19  133.1  31.0  203  169-379    75-287 (301)
 40 d2bbkh_ b.69.2.1 (H:) Methylam  99.7 1.5E-15 1.1E-19  142.3  25.4  242  172-414    51-336 (355)
 41 d1pbyb_ b.69.2.2 (B:) Quinohem  99.7 4.5E-15 3.3E-19  137.2  24.6  198  169-375    35-318 (337)
 42 d1hzua2 b.70.2.1 (A:118-543) C  99.7 3.3E-15 2.4E-19  145.0  23.8  188  222-413    34-241 (426)
 43 d1mdah_ b.69.2.1 (H:) Methylam  99.6 1.8E-14 1.3E-18  136.7  19.9  241  171-414    68-350 (368)
 44 d1jmxb_ b.69.2.2 (B:) Quinohem  99.6 2.8E-13   2E-17  125.3  22.9  205  167-376    39-331 (346)
 45 d2madh_ b.69.2.1 (H:) Methylam  99.5 3.6E-12 2.6E-16  119.9  29.4  173  212-387   168-371 (373)
 46 d1ri6a_ b.69.11.1 (A:) Putativ  99.5 2.3E-12 1.7E-16  118.8  21.6  187  222-411     6-209 (333)
 47 d2bgra1 b.70.3.1 (A:39-508) Di  99.4 3.4E-11 2.5E-15  117.5  25.0  137  172-311    21-190 (470)
 48 d2bbkh_ b.69.2.1 (H:) Methylam  99.3 1.8E-10 1.3E-14  106.9  24.4  209  170-386   108-352 (355)
 49 d1qnia2 b.69.3.1 (A:10-450) Ni  99.2 7.7E-10 5.6E-14  106.1  22.8  218  185-409    19-341 (441)
 50 d2hqsa1 b.68.4.1 (A:163-431) T  99.2 1.4E-08   1E-12   90.5  27.9  212  170-388    41-268 (269)
 51 d1qnia2 b.69.3.1 (A:10-450) Ni  99.1   1E-09 7.6E-14  105.2  19.6  189  223-414    14-293 (441)
 52 d1mdah_ b.69.2.1 (H:) Methylam  99.1 8.7E-10 6.4E-14  103.6  17.5  207  171-385   127-364 (368)
 53 d1rwia_ b.68.9.1 (A:) Serine/t  99.1   4E-08 2.9E-12   87.7  27.0  240  159-407     5-251 (260)
 54 d1q7fa_ b.68.9.1 (A:) Brain tu  99.1 2.7E-07 1.9E-11   83.1  32.3  233  170-413    25-276 (279)
 55 d2hqsa1 b.68.4.1 (A:163-431) T  99.0 2.6E-07 1.9E-11   81.9  30.2  220  188-412    20-249 (269)
 56 d1jofa_ b.69.10.1 (A:) 3-carbo  99.0 7.7E-08 5.6E-12   90.4  26.3  240  170-410    42-341 (365)
 57 d1pjxa_ b.68.6.1 (A:) Diisopro  99.0 4.4E-07 3.2E-11   83.2  29.9  234  170-410    20-299 (314)
 58 d2dg1a1 b.68.6.1 (A:6-324) Lac  99.0 1.8E-06 1.3E-10   79.1  33.7  224  167-397    39-294 (319)
 59 d2bgra1 b.70.3.1 (A:39-508) Di  99.0 3.2E-09 2.3E-13  103.1  14.3  145  255-407    21-199 (470)
 60 d2p4oa1 b.68.6.3 (A:4-305) Hyp  98.9 1.9E-06 1.4E-10   78.2  28.7  220  168-395    28-271 (302)
 61 d2p4oa1 b.68.6.3 (A:4-305) Hyp  98.8 3.9E-07 2.8E-11   82.9  22.4  194  208-409    27-237 (302)
 62 d1jofa_ b.69.10.1 (A:) 3-carbo  98.7 7.6E-06 5.5E-10   76.3  27.7  222  186-410    13-291 (365)
 63 d2dg1a1 b.68.6.1 (A:6-324) Lac  98.7   6E-06 4.4E-10   75.5  25.5  197  209-412    40-259 (319)
 64 d2ghsa1 b.68.6.1 (A:20-314) Re  98.6 6.8E-05 4.9E-09   67.5  30.8  217  171-398    21-261 (295)
 65 d1rwia_ b.68.9.1 (A:) Serine/t  98.6 9.8E-06 7.1E-10   71.6  23.0  191  170-366    59-253 (260)
 66 d1xfda1 b.70.3.1 (A:127-591) D  98.5 2.5E-06 1.9E-10   82.5  20.4  219  174-393    23-321 (465)
 67 d1q7fa_ b.68.9.1 (A:) Brain tu  98.5 2.8E-05 2.1E-09   69.3  26.1  183  178-369    82-275 (279)
 68 d1k32a2 b.68.7.1 (A:39-319) Tr  98.5 1.8E-05 1.3E-09   69.7  23.6  222  178-412    12-264 (281)
 69 d1pjxa_ b.68.6.1 (A:) Diisopro  98.5 2.3E-05 1.7E-09   71.4  23.3  193  170-367    73-299 (314)
 70 d1xfda1 b.70.3.1 (A:127-591) D  98.4 5.9E-05 4.3E-09   72.5  26.0  244  170-414   116-447 (465)
 71 d2ghsa1 b.68.6.1 (A:20-314) Re  98.3 0.00025 1.8E-08   63.6  25.9  182  169-353    60-260 (295)
 72 d1npea_ b.68.5.1 (A:) Nidogen   98.2  0.0018 1.3E-07   56.8  29.7  227  179-412     2-240 (263)
 73 d1ijqa1 b.68.5.1 (A:377-642) L  98.0  0.0042 3.1E-07   54.4  33.2  225  180-412     3-240 (266)
 74 d1fwxa2 b.69.3.1 (A:8-451) Nit  98.0  0.0024 1.7E-07   59.2  25.7  185  219-409    98-358 (459)
 75 d1utca2 b.69.6.1 (A:4-330) Cla  97.8    0.01 7.6E-07   52.1  26.3  228  177-414    31-290 (327)
 76 d2ad6a1 b.70.1.1 (A:1-571) Met  97.4   0.014   1E-06   56.8  23.6  237  174-414   112-498 (571)
 77 d1fwxa2 b.69.3.1 (A:8-451) Nit  97.4   0.033 2.4E-06   51.4  24.0  213  178-395    99-403 (459)
 78 d1utca2 b.69.6.1 (A:4-330) Cla  97.3   0.049 3.5E-06   47.7  25.5  187  170-360   105-321 (327)
 79 d2ad6a1 b.70.1.1 (A:1-571) Met  97.2   0.041   3E-06   53.4  24.4  208  186-397   175-527 (571)
 80 d1k32a2 b.68.7.1 (A:39-319) Tr  97.2  0.0013 9.1E-08   57.2  11.7   96  298-395     5-112 (281)
 81 d1kv9a2 b.70.1.1 (A:1-560) Qui  97.1    0.11   8E-06   50.1  25.6  223  187-413   178-555 (560)
 82 d1w6sa_ b.70.1.1 (A:) Methanol  97.1   0.035 2.6E-06   54.1  21.9   81  313-397   453-536 (596)
 83 d1npea_ b.68.5.1 (A:) Nidogen   97.0   0.089 6.5E-06   45.3  31.0  199  170-375    38-246 (263)
 84 d1kb0a2 b.70.1.1 (A:1-573) Qui  96.9    0.11 8.2E-06   50.1  24.0   96  314-413   458-570 (573)
 85 d1kv9a2 b.70.1.1 (A:1-560) Qui  96.9   0.049 3.5E-06   52.7  21.0  234  178-414   118-492 (560)
 86 d1flga_ b.70.1.1 (A:) Ethanol   96.9   0.018 1.3E-06   56.1  17.7   95  312-410   465-581 (582)
 87 d1w6sa_ b.70.1.1 (A:) Methanol  96.8    0.18 1.3E-05   48.9  24.4  233  180-414   124-507 (596)
 88 d1xipa_ b.69.14.1 (A:) Nucleop  96.7    0.07 5.1E-06   48.7  19.5  169  170-346    39-225 (381)
 89 d1kb0a2 b.70.1.1 (A:1-573) Qui  96.6    0.24 1.7E-05   47.7  23.9   55  358-414   457-511 (573)
 90 d1k3ia3 b.69.1.1 (A:151-537) G  96.5    0.14   1E-05   46.0  20.5  136  188-325    53-215 (387)
 91 d1k3ia3 b.69.1.1 (A:151-537) G  96.5    0.26 1.9E-05   44.0  22.2  233  174-409    82-381 (387)
 92 d1ijqa1 b.68.5.1 (A:377-642) L  96.5    0.22 1.6E-05   42.7  27.2  186  222-411     3-196 (266)
 93 d1qfma1 b.69.7.1 (A:1-430) Pro  95.7    0.73 5.3E-05   42.2  29.7  255  155-412   110-416 (430)
 94 d1h6la_ b.68.3.1 (A:) Thermost  95.5    0.79 5.7E-05   40.9  22.0  185  219-411    39-264 (353)
 95 d1xipa_ b.69.14.1 (A:) Nucleop  95.1     1.1 8.1E-05   40.3  20.0  176  209-395    37-230 (381)
 96 d1v04a_ b.68.6.2 (A:) Serum pa  94.7     1.3 9.6E-05   39.1  21.9  165  229-396    67-270 (340)
 97 d1h6la_ b.68.3.1 (A:) Thermost  94.2     1.7 0.00013   38.6  20.9  183  185-374    48-271 (353)
 98 d1zgka1 b.68.11.1 (A:322-609)   93.4     1.1 7.7E-05   37.9  15.0  214  187-411    19-268 (288)
 99 d1flga_ b.70.1.1 (A:) Ethanol   93.1     3.7 0.00027   38.9  26.8   56  357-414   465-520 (582)
100 d1v04a_ b.68.6.2 (A:) Serum pa  90.5     5.2 0.00038   35.0  20.8  141  269-411    67-238 (340)
101 d2hu7a1 b.69.7.2 (A:9-321) Acy  89.6     4.5 0.00033   33.0  16.5  182  169-371   105-309 (313)
102 d1jtdb_ b.69.5.2 (B:) beta-lac  88.3     6.2 0.00045   32.9  15.9  219  170-409    28-247 (273)
103 d1zgka1 b.68.11.1 (A:322-609)   86.2     7.9 0.00058   31.9  14.9  176  187-369    70-269 (288)
104 d1crua_ b.68.2.1 (A:) Soluble   84.0      15  0.0011   33.2  19.1   52  209-260    27-86  (450)
105 d1jtdb_ b.69.5.2 (B:) beta-lac  81.9      13 0.00092   30.8  15.9  184  208-410    25-209 (273)
106 d1crua_ b.68.2.1 (A:) Soluble   78.6      23  0.0017   31.9  17.3  107  291-398    26-163 (450)
107 d1qfma1 b.69.7.1 (A:1-430) Pro  78.4      22  0.0016   31.5  27.6  183  188-370   209-417 (430)
108 d1wp5a_ b.68.10.1 (A:) Topoiso  66.3      37  0.0027   28.9  20.3  154  166-320    38-223 (323)
109 d1tl2a_ b.67.1.1 (A:) Tachylec  57.1      42  0.0031   26.5  11.7  138  208-352    39-198 (235)
110 d1a12a_ b.69.5.1 (A:) Regulato  43.9      89  0.0065   26.4  25.1  228  170-410    49-353 (401)
111 d1c8ua2 d.38.1.3 (A:116-286) T  36.5      15  0.0011   28.2   3.9   59  178-236   107-171 (171)
112 d2nt0a1 b.71.1.2 (A:1-77,A:432  22.0 1.4E+02    0.01   21.7   8.0   52  206-259    85-141 (143)

No 1  
>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]}
Probab=100.00  E-value=5.1e-35  Score=275.94  Aligned_cols=237  Identities=19%  Similarity=0.288  Sum_probs=209.3

Q ss_pred             eeEeecCC-CcEEEEEcCCeEEEEECCCCCeEEeEecCCCCCeEEEEEcCCCCeEEEEECCCcEEEEECCCCeee--EEe
Q 014934          170 LNLVDWSS-HNVLAVGLGNCVYLWNACSSKVTKLCDLGIDDSVCSVGWANRNTHLAVGTSHGKVQIWDASRCKRV--RTM  246 (415)
Q Consensus       170 i~~l~ws~-~~~la~~~d~~V~iwd~~~~~~~~~~~~~~~~~V~~v~~sp~g~~la~g~~dg~V~iwd~~~~~~~--~~l  246 (415)
                      ..+++++| ++.|+++.++.|++|++.+.+....+. +|.+.|++++|+|+|++||+|+.||.|+|||+.+++..  ..+
T Consensus        20 ~~~~a~~~~g~~l~~~~~~~v~i~~~~~~~~~~~~~-~H~~~v~~~~~sp~g~~latg~~dg~i~iwd~~~~~~~~~~~~   98 (311)
T d1nr0a1          20 AVVLGNTPAGDKIQYCNGTSVYTVPVGSLTDTEIYT-EHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTHILKTTI   98 (311)
T ss_dssp             CCCCEECTTSSEEEEEETTEEEEEETTCSSCCEEEC-CCSSCEEEEEECTTSSEEEEEETTSEEEEEESSSTTCCEEEEE
T ss_pred             eEEEEEcCCCCEEEEEeCCEEEEEECCCCceeEEEc-CCCCCEEEEEEeCCCCeEeccccCceEeeeeeecccccccccc
Confidence            34668888 888999999999999999998888875 89999999999999999999999999999999877543  567


Q ss_pred             cCCCccEEEEEee--CCEEEEEeC--CCcEEEEECCCCCccEEEeccccCCeEEEEEeCCCCE-EEEEeCCCcEEEEECC
Q 014934          247 EGHRLRVGALAWS--SSLLSSGSR--DKSILQRDIRAQEDFVSKLSGHKSEVCGLKWSYDNRE-LASGGNDNRLFVWNQH  321 (415)
Q Consensus       247 ~~h~~~V~~l~~~--~~~l~sgs~--dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~spdg~~-lasg~~dg~I~iwd~~  321 (415)
                      ..|...|.+++|+  +.+|++++.  ++.+++|++.+.. ....+.+|...|.+++|+|++++ |++|+.|+.|++||++
T Consensus        99 ~~~~~~v~~v~~s~d~~~l~~~~~~~~~~~~v~~~~~~~-~~~~l~~h~~~v~~v~~~~~~~~~l~sgs~d~~i~i~d~~  177 (311)
T d1nr0a1          99 PVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFDTGT-SNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGP  177 (311)
T ss_dssp             ECSSSCEEEEEECTTSCEEEEEECCSSCSEEEEETTTCC-BCBCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETT
T ss_pred             ccccCcccccccccccccccccccccccccccccccccc-ccccccccccccccccccccceeeeccccccccccccccc
Confidence            8899999999999  467888875  4669999999876 56778899999999999999885 8889999999999999


Q ss_pred             CCceeEEeccCCCcEEEEEEcCCCCcEEEEEcCCCCCeEEEEECCCCcEEEEee--------CCCCEEEEEECCCCCeEE
Q 014934          322 STQPVLKYCEHTAAVKAIAWSPHLHGLLASGGGTADRCIRFWNTTTNTHLSCMD--------TGSQVCNLVWSKNVNELV  393 (415)
Q Consensus       322 ~~~~~~~~~~h~~~V~~l~~sp~~~~llasggg~~d~~I~iwd~~t~~~~~~~~--------~~~~V~~l~~s~~~~~l~  393 (415)
                      +++....+..|...|.+++|+|++. ++++++  .|+.|++||+.++..+..+.        |...|.+++|+|++++|+
T Consensus       178 ~~~~~~~~~~~~~~i~~v~~~p~~~-~l~~~~--~d~~v~~~d~~~~~~~~~~~~~~~~~~~h~~~V~~~~~s~~~~~l~  254 (311)
T d1nr0a1         178 PFKFKSTFGEHTKFVHSVRYNPDGS-LFASTG--GDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIA  254 (311)
T ss_dssp             TBEEEEEECCCSSCEEEEEECTTSS-EEEEEE--TTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEE
T ss_pred             ccccccccccccccccccccCcccc-cccccc--ccccccccccccccccccccccccccccccccccccccCCCCCEEE
Confidence            9999999999999999999999987 666666  79999999999998887764        456799999999999999


Q ss_pred             EEEecCCCcEEEEECCCCcc
Q 014934          394 STHGYSQNQIIVWRYPTMSK  413 (415)
Q Consensus       394 s~~g~~dg~I~vw~~~s~~~  413 (415)
                      +  |+.||.|+|||+.+++.
T Consensus       255 t--gs~Dg~v~iwd~~t~~~  272 (311)
T d1nr0a1         255 S--ASADKTIKIWNVATLKV  272 (311)
T ss_dssp             E--EETTSEEEEEETTTTEE
T ss_pred             E--EeCCCeEEEEECCCCcE
Confidence            8  77899999999988764


No 2  
>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=5.6e-34  Score=270.76  Aligned_cols=243  Identities=21%  Similarity=0.254  Sum_probs=213.4

Q ss_pred             CCCcceeEeecCC-CcEEEEEcCCeEEEEECCCCCeE---Ee-EecCCCCCeEEEEEcCCCCeEEEEECCCcEEEEECCC
Q 014934          165 QDDFYLNLVDWSS-HNVLAVGLGNCVYLWNACSSKVT---KL-CDLGIDDSVCSVGWANRNTHLAVGTSHGKVQIWDASR  239 (415)
Q Consensus       165 ~~~~~i~~l~ws~-~~~la~~~d~~V~iwd~~~~~~~---~~-~~~~~~~~V~~v~~sp~g~~la~g~~dg~V~iwd~~~  239 (415)
                      .....|.+++|+| +.+|++|.|+.|+|||+.++...   .. ...+|.+.|.+++|+|+|++|++|+.||.|++||+..
T Consensus        49 ~H~~~V~~v~fs~~g~~latg~dg~V~iWd~~~~~~~~~~~~~~~~~h~~~I~~v~~s~dg~~l~s~~~dg~i~iwd~~~  128 (337)
T d1gxra_          49 NHGEVVCAVTISNPTRHVYTGGKGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAA  128 (337)
T ss_dssp             CCSSCCCEEEECSSSSEEEEECBSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEESSSEEEEEECCC
T ss_pred             CCCCcEEEEEECCCCCEEEEEECCEEEEEEccCCcccceeEEeeecCCCCcEEEEEEcCCCCEEEEeecccccccccccc
Confidence            3445689999999 88999999999999999765422   22 2237888999999999999999999999999999864


Q ss_pred             --CeeeEEecCCCccEEEEEee--CCEEEEEeCCCcEEEEECCCCCccEEEeccccCCeEEEEEeCCCCEEEEEeCCCcE
Q 014934          240 --CKRVRTMEGHRLRVGALAWS--SSLLSSGSRDKSILQRDIRAQEDFVSKLSGHKSEVCGLKWSYDNRELASGGNDNRL  315 (415)
Q Consensus       240 --~~~~~~l~~h~~~V~~l~~~--~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~spdg~~lasg~~dg~I  315 (415)
                        .+....+..|...+.+++|+  +.++++++.|+.|++||+++.. ......+|...|.+++|++++..+++|+.|+.|
T Consensus       129 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~~~~~~~~-~~~~~~~~~~~v~~l~~s~~~~~~~~~~~d~~v  207 (337)
T d1gxra_         129 PTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQT-LVRQFQGHTDGASCIDISNDGTKLWTGGLDNTV  207 (337)
T ss_dssp             C--EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTE-EEEEECCCSSCEEEEEECTTSSEEEEEETTSEE
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccc-ccccccccccccccccccccccccccccccccc
Confidence              45667788899999999998  4799999999999999999876 577788899999999999999999999999999


Q ss_pred             EEEECCCCceeEEeccCCCcEEEEEEcCCCCcEEEEEcCCCCCeEEEEECCCCcEEEEeeCCCCEEEEEECCCCCeEEEE
Q 014934          316 FVWNQHSTQPVLKYCEHTAAVKAIAWSPHLHGLLASGGGTADRCIRFWNTTTNTHLSCMDTGSQVCNLVWSKNVNELVST  395 (415)
Q Consensus       316 ~iwd~~~~~~~~~~~~h~~~V~~l~~sp~~~~llasggg~~d~~I~iwd~~t~~~~~~~~~~~~V~~l~~s~~~~~l~s~  395 (415)
                      ++||+++++.+..+ .|...|.+++|+|++. ++++++  .|+.|++||+.+++......+...|.+++|+|++++|++ 
T Consensus       208 ~i~d~~~~~~~~~~-~~~~~i~~l~~~~~~~-~l~~~~--~d~~i~i~d~~~~~~~~~~~~~~~i~~v~~s~~g~~l~s-  282 (337)
T d1gxra_         208 RSWDLREGRQLQQH-DFTSQIFSLGYCPTGE-WLAVGM--ESSNVEVLHVNKPDKYQLHLHESCVLSLKFAYCGKWFVS-  282 (337)
T ss_dssp             EEEETTTTEEEEEE-ECSSCEEEEEECTTSS-EEEEEE--TTSCEEEEETTSSCEEEECCCSSCEEEEEECTTSSEEEE-
T ss_pred             cccccccceeeccc-ccccceEEEEEccccc-ccceec--cccccccccccccccccccccccccceEEECCCCCEEEE-
Confidence            99999999988777 6889999999999987 566665  799999999999998888788899999999999999998 


Q ss_pred             EecCCCcEEEEECCCCccc
Q 014934          396 HGYSQNQIIVWRYPTMSKV  414 (415)
Q Consensus       396 ~g~~dg~I~vw~~~s~~~l  414 (415)
                       |+.||.|++||+++++.+
T Consensus       283 -~s~Dg~i~iwd~~~~~~~  300 (337)
T d1gxra_         283 -TGKDNLLNAWRTPYGASI  300 (337)
T ss_dssp             -EETTSEEEEEETTTCCEE
T ss_pred             -EeCCCeEEEEECCCCCEE
Confidence             778999999999988754


No 3  
>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]}
Probab=100.00  E-value=1.9e-33  Score=265.13  Aligned_cols=234  Identities=19%  Similarity=0.278  Sum_probs=200.6

Q ss_pred             cceeEeecCC-CcEEEEE-cCCeEEEEECCCCCeEEeEe-cCCCCCeEEEEEcCCCCeEEEEEC--CCcEEEEECCCCee
Q 014934          168 FYLNLVDWSS-HNVLAVG-LGNCVYLWNACSSKVTKLCD-LGIDDSVCSVGWANRNTHLAVGTS--HGKVQIWDASRCKR  242 (415)
Q Consensus       168 ~~i~~l~ws~-~~~la~~-~d~~V~iwd~~~~~~~~~~~-~~~~~~V~~v~~sp~g~~la~g~~--dg~V~iwd~~~~~~  242 (415)
                      ..|++++|+| +++||+| .|+.|+|||+.+++...... ..|.+.|.+++|+|++++|++++.  +..++||++++++.
T Consensus        59 ~~v~~~~~sp~g~~latg~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~v~~s~d~~~l~~~~~~~~~~~~v~~~~~~~~  138 (311)
T d1nr0a1          59 HQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFDTGTS  138 (311)
T ss_dssp             SCEEEEEECTTSSEEEEEETTSEEEEEESSSTTCCEEEEEECSSSCEEEEEECTTSCEEEEEECCSSCSEEEEETTTCCB
T ss_pred             CCEEEEEEeCCCCeEeccccCceEeeeeeeccccccccccccccCccccccccccccccccccccccccccccccccccc
Confidence            3599999999 7888877 68999999998876543222 278899999999999999999986  45699999999999


Q ss_pred             eEEecCCCccEEEEEeeC---CEEEEEeCCCcEEEEECCCCCccEEEeccccCCeEEEEEeCCCCEEEEEeCCCcEEEEE
Q 014934          243 VRTMEGHRLRVGALAWSS---SLLSSGSRDKSILQRDIRAQEDFVSKLSGHKSEVCGLKWSYDNRELASGGNDNRLFVWN  319 (415)
Q Consensus       243 ~~~l~~h~~~V~~l~~~~---~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~spdg~~lasg~~dg~I~iwd  319 (415)
                      +..+.+|...|.+++|++   ..|++|+.||.|++||+++.. ....+..|...|+++.|+|++++|++|+.|+.|++||
T Consensus       139 ~~~l~~h~~~v~~v~~~~~~~~~l~sgs~d~~i~i~d~~~~~-~~~~~~~~~~~i~~v~~~p~~~~l~~~~~d~~v~~~d  217 (311)
T d1nr0a1         139 NGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFK-FKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYN  217 (311)
T ss_dssp             CBCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBE-EEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred             cccccccccccccccccccceeeecccccccccccccccccc-cccccccccccccccccCccccccccccccccccccc
Confidence            999999999999999984   368899999999999999876 5778889999999999999999999999999999999


Q ss_pred             CCCCceeEEec-------cCCCcEEEEEEcCCCCcEEEEEcCCCCCeEEEEECCCCcEEEEeeCCC----CEEEEEECCC
Q 014934          320 QHSTQPVLKYC-------EHTAAVKAIAWSPHLHGLLASGGGTADRCIRFWNTTTNTHLSCMDTGS----QVCNLVWSKN  388 (415)
Q Consensus       320 ~~~~~~~~~~~-------~h~~~V~~l~~sp~~~~llasggg~~d~~I~iwd~~t~~~~~~~~~~~----~V~~l~~s~~  388 (415)
                      +.++..+..+.       +|.+.|.+++|+|+++ +|++|+  .|+.|+|||+.+++++..+..+.    .+.++.|++ 
T Consensus       218 ~~~~~~~~~~~~~~~~~~~h~~~V~~~~~s~~~~-~l~tgs--~Dg~v~iwd~~t~~~~~~l~~~~~~~~~~~~~~~~~-  293 (311)
T d1nr0a1         218 GVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGT-KIASAS--ADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTK-  293 (311)
T ss_dssp             TTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSS-EEEEEE--TTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECS-
T ss_pred             cccccccccccccccccccccccccccccCCCCC-EEEEEe--CCCeEEEEECCCCcEEEEEECCCCccceEEEEEecC-
Confidence            99988877664       5889999999999997 666776  79999999999999999887443    456666654 


Q ss_pred             CCeEEEEEecCCCcEEEEECC
Q 014934          389 VNELVSTHGYSQNQIIVWRYP  409 (415)
Q Consensus       389 ~~~l~s~~g~~dg~I~vw~~~  409 (415)
                       +.|++  ++.||.|++||.+
T Consensus       294 -~~l~s--~s~dG~i~~wd~d  311 (311)
T d1nr0a1         294 -QALVS--ISANGFINFVNPE  311 (311)
T ss_dssp             -SCEEE--EETTCCEEEEETT
T ss_pred             -CEEEE--EECCCEEEEEeCC
Confidence             56777  6689999999974


No 4  
>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=1.3e-32  Score=261.22  Aligned_cols=234  Identities=17%  Similarity=0.253  Sum_probs=205.6

Q ss_pred             CcceeEeecCC-CcEEEEE-cCCeEEEEECCCCCeEEeEec-CCCCCeEEEEEcCCCCeEEEEECCCcEEEEECCCCeee
Q 014934          167 DFYLNLVDWSS-HNVLAVG-LGNCVYLWNACSSKVTKLCDL-GIDDSVCSVGWANRNTHLAVGTSHGKVQIWDASRCKRV  243 (415)
Q Consensus       167 ~~~i~~l~ws~-~~~la~~-~d~~V~iwd~~~~~~~~~~~~-~~~~~V~~v~~sp~g~~la~g~~dg~V~iwd~~~~~~~  243 (415)
                      +-.|.+++|+| +++|+++ .|+.|++||+..........+ .|...|.++.|+|++.++++++.++.|++||+.+++..
T Consensus        97 ~~~I~~v~~s~dg~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~~~~~~~~~~  176 (337)
T d1gxra_          97 DNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLV  176 (337)
T ss_dssp             TSBEEEEEECTTSSEEEEEESSSEEEEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEE
T ss_pred             CCcEEEEEEcCCCCEEEEeecccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            44799999999 6777766 689999999876543322222 77889999999999999999999999999999999999


Q ss_pred             EEecCCCccEEEEEee--CCEEEEEeCCCcEEEEECCCCCccEEEeccccCCeEEEEEeCCCCEEEEEeCCCcEEEEECC
Q 014934          244 RTMEGHRLRVGALAWS--SSLLSSGSRDKSILQRDIRAQEDFVSKLSGHKSEVCGLKWSYDNRELASGGNDNRLFVWNQH  321 (415)
Q Consensus       244 ~~l~~h~~~V~~l~~~--~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~spdg~~lasg~~dg~I~iwd~~  321 (415)
                      ....+|...|.+++|+  +..+++|+.|+.|++||++++. .+.. ..|...|.+++|+|++++|++|+.|+.|++||++
T Consensus       177 ~~~~~~~~~v~~l~~s~~~~~~~~~~~d~~v~i~d~~~~~-~~~~-~~~~~~i~~l~~~~~~~~l~~~~~d~~i~i~d~~  254 (337)
T d1gxra_         177 RQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGR-QLQQ-HDFTSQIFSLGYCPTGEWLAVGMESSNVEVLHVN  254 (337)
T ss_dssp             EEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTE-EEEE-EECSSCEEEEEECTTSSEEEEEETTSCEEEEETT
T ss_pred             ccccccccccccccccccccccccccccccccccccccce-eecc-cccccceEEEEEcccccccceecccccccccccc
Confidence            9999999999999998  5799999999999999999876 3443 3588899999999999999999999999999999


Q ss_pred             CCceeEEeccCCCcEEEEEEcCCCCcEEEEEcCCCCCeEEEEECCCCcEEEEeeCCCCEEEEEECCCCCeEEEEEecCCC
Q 014934          322 STQPVLKYCEHTAAVKAIAWSPHLHGLLASGGGTADRCIRFWNTTTNTHLSCMDTGSQVCNLVWSKNVNELVSTHGYSQN  401 (415)
Q Consensus       322 ~~~~~~~~~~h~~~V~~l~~sp~~~~llasggg~~d~~I~iwd~~t~~~~~~~~~~~~V~~l~~s~~~~~l~s~~g~~dg  401 (415)
                      +++.. ....|...|.+++|+|+++ +|++++  .|+.|++||+.+++.+..+.+...|.+++|+|++++|++  |+.||
T Consensus       255 ~~~~~-~~~~~~~~i~~v~~s~~g~-~l~s~s--~Dg~i~iwd~~~~~~~~~~~~~~~v~~~~~s~d~~~l~t--~s~D~  328 (337)
T d1gxra_         255 KPDKY-QLHLHESCVLSLKFAYCGK-WFVSTG--KDNLLNAWRTPYGASIFQSKESSSVLSCDISVDDKYIVT--GSGDK  328 (337)
T ss_dssp             SSCEE-EECCCSSCEEEEEECTTSS-EEEEEE--TTSEEEEEETTTCCEEEEEECSSCEEEEEECTTSCEEEE--EETTS
T ss_pred             ccccc-cccccccccceEEECCCCC-EEEEEe--CCCeEEEEECCCCCEEEEccCCCCEEEEEEeCCCCEEEE--EeCCC
Confidence            88765 4558999999999999997 666666  899999999999999999999999999999999999998  77899


Q ss_pred             cEEEEEC
Q 014934          402 QIIVWRY  408 (415)
Q Consensus       402 ~I~vw~~  408 (415)
                      .|+|||+
T Consensus       329 ~I~vWdl  335 (337)
T d1gxra_         329 KATVYEV  335 (337)
T ss_dssp             CEEEEEE
T ss_pred             eEEEEEE
Confidence            9999996


No 5  
>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]}
Probab=100.00  E-value=3.7e-32  Score=254.97  Aligned_cols=233  Identities=16%  Similarity=0.305  Sum_probs=198.1

Q ss_pred             cceeEeecCC-CcEEEEE-cCCeEEEEECCCCCeEEeEecCCCCCeEEEEEcCCCCeEEEEECCCcEEEEECCCC----e
Q 014934          168 FYLNLVDWSS-HNVLAVG-LGNCVYLWNACSSKVTKLCDLGIDDSVCSVGWANRNTHLAVGTSHGKVQIWDASRC----K  241 (415)
Q Consensus       168 ~~i~~l~ws~-~~~la~~-~d~~V~iwd~~~~~~~~~~~~~~~~~V~~v~~sp~g~~la~g~~dg~V~iwd~~~~----~  241 (415)
                      -.|++++|+| +.+|++| .|+.|+|||..+++....+. .|...|.+++|+|++.++++|+.|+.+.+|+....    +
T Consensus        56 ~~I~~l~~s~~~~~l~sgs~Dg~v~iWd~~~~~~~~~~~-~~~~~v~~v~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~  134 (340)
T d1tbga_          56 AKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIP-LRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVR  134 (340)
T ss_dssp             SCEEEEEECTTSSEEEEEETTTEEEEEETTTTEEEEEEE-CSCSCEEEEEECTTSSEEEEEETTCCEEEEESSSSCSCCC
T ss_pred             CCEEEEEECCCCCEEEEEECCCceeeeecccceeEEEEe-cccccEEeeEeeccceeeeeecccceeecccccccccccc
Confidence            4599999999 7777777 58999999999999888776 78899999999999999999999999999997542    2


Q ss_pred             eeEEecCCC-----------------------------------------ccEEEEEee--CCEEEEEeCCCcEEEEECC
Q 014934          242 RVRTMEGHR-----------------------------------------LRVGALAWS--SSLLSSGSRDKSILQRDIR  278 (415)
Q Consensus       242 ~~~~l~~h~-----------------------------------------~~V~~l~~~--~~~l~sgs~dg~I~iwd~~  278 (415)
                      ....+.+|.                                         ..+....+.  ..++++|+.|+.|++||++
T Consensus       135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~i~d~~  214 (340)
T d1tbga_         135 VSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVR  214 (340)
T ss_dssp             EEEEECCCSSCEEEEEEEETTEEEEEETTTEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTTEEEEEETT
T ss_pred             cceecccccccccccccccccccccccccccccccccccccccccccccceeEeeeccccccceeEEeecCceEEEEECC
Confidence            222232222                                         233333443  3678999999999999999


Q ss_pred             CCCccEEEeccccCCeEEEEEeCCCCEEEEEeCCCcEEEEECCCCceeEEec--cCCCcEEEEEEcCCCCcEEEEEcCCC
Q 014934          279 AQEDFVSKLSGHKSEVCGLKWSYDNRELASGGNDNRLFVWNQHSTQPVLKYC--EHTAAVKAIAWSPHLHGLLASGGGTA  356 (415)
Q Consensus       279 ~~~~~~~~~~~h~~~V~~l~~spdg~~lasg~~dg~I~iwd~~~~~~~~~~~--~h~~~V~~l~~sp~~~~llasggg~~  356 (415)
                      +.. .+..+.+|...|.+++|+|++++|++|+.|+.|++||+.....+..+.  .|...|.+++|+|++. +|++|+  .
T Consensus       215 ~~~-~~~~~~~h~~~i~~v~~~p~~~~l~s~s~d~~i~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~-~l~~g~--~  290 (340)
T d1tbga_         215 EGM-CRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGR-LLLAGY--D  290 (340)
T ss_dssp             TTE-EEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECSSSC-EEEEEE--T
T ss_pred             CCc-EEEEEeCCCCCeEEEEECCCCCEEEEEeCCCeEEEEeecccccccccccccccCceEEEEECCCCC-EEEEEE--C
Confidence            887 678889999999999999999999999999999999999988777663  5677899999999987 666666  7


Q ss_pred             CCeEEEEECCCCcEEEEee-CCCCEEEEEECCCCCeEEEEEecCCCcEEEEE
Q 014934          357 DRCIRFWNTTTNTHLSCMD-TGSQVCNLVWSKNVNELVSTHGYSQNQIIVWR  407 (415)
Q Consensus       357 d~~I~iwd~~t~~~~~~~~-~~~~V~~l~~s~~~~~l~s~~g~~dg~I~vw~  407 (415)
                      |+.|++||+.+++++..+. |...|.+++|+|++++|++  |+.||.|+|||
T Consensus       291 dg~i~iwd~~~~~~~~~~~~H~~~V~~l~~s~d~~~l~s--~s~Dg~v~iWd  340 (340)
T d1tbga_         291 DFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVAT--GSWDSFLKIWN  340 (340)
T ss_dssp             TSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEE--EETTSCEEEEC
T ss_pred             CCEEEEEECCCCcEEEEEcCCCCCEEEEEEeCCCCEEEE--EccCCEEEEeC
Confidence            9999999999999999887 6789999999999999998  77899999997


No 6  
>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]}
Probab=100.00  E-value=1.6e-32  Score=253.53  Aligned_cols=233  Identities=18%  Similarity=0.350  Sum_probs=202.8

Q ss_pred             cceeEeecCC-CcEEEEE-cCCeEEEEECCCCCeEEeEecCCCCCeEEE-------------------------------
Q 014934          168 FYLNLVDWSS-HNVLAVG-LGNCVYLWNACSSKVTKLCDLGIDDSVCSV-------------------------------  214 (415)
Q Consensus       168 ~~i~~l~ws~-~~~la~~-~d~~V~iwd~~~~~~~~~~~~~~~~~V~~v-------------------------------  214 (415)
                      -.|++|+|+| +++|++| .|+.|+|||+.+++....+. +|...|.++                               
T Consensus        18 ~~I~~l~~sp~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~-~h~~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   96 (317)
T d1vyhc1          18 SPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLK-GHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRT   96 (317)
T ss_dssp             SCEEEEEECSSSSEEEEEESSSCEEEEETTTCCCCEEEC-CCSSCEEEEEECTTSSEEEEEETTSCCCEEETTSSCEEEC
T ss_pred             CCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCCEEEEEe-CCCCcEEEEeeecccccccccccccccccccccccccccc
Confidence            4699999999 7777776 58999999999887666553 444455544                               


Q ss_pred             -----------EEcCCCCeEEEEECCCcEEEEECCCCeeeEEecCCCccEEEEEee--CCEEEEEeCCCcEEEEECCCCC
Q 014934          215 -----------GWANRNTHLAVGTSHGKVQIWDASRCKRVRTMEGHRLRVGALAWS--SSLLSSGSRDKSILQRDIRAQE  281 (415)
Q Consensus       215 -----------~~sp~g~~la~g~~dg~V~iwd~~~~~~~~~l~~h~~~V~~l~~~--~~~l~sgs~dg~I~iwd~~~~~  281 (415)
                                 .|+++++.+++++.|+.+++||+.+++.+..+.+|...+.+++|+  +.+|++|+.|+.|++|++....
T Consensus        97 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~~~~~~~~~  176 (317)
T d1vyhc1          97 MHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKE  176 (317)
T ss_dssp             CCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCC
T ss_pred             cccccccceeeeccCCCceEEeeccCcceeEeecccceeeeEEccCCCcceeeecccCCCEEEEEeCCCeEEEEeeccce
Confidence                       455556667888889999999999999999999999999999998  5899999999999999999887


Q ss_pred             ccEEEeccccCCeEEEEEeCCC--------------------CEEEEEeCCCcEEEEECCCCceeEEeccCCCcEEEEEE
Q 014934          282 DFVSKLSGHKSEVCGLKWSYDN--------------------RELASGGNDNRLFVWNQHSTQPVLKYCEHTAAVKAIAW  341 (415)
Q Consensus       282 ~~~~~~~~h~~~V~~l~~spdg--------------------~~lasg~~dg~I~iwd~~~~~~~~~~~~h~~~V~~l~~  341 (415)
                       ....+.+|...+.+++|+|++                    .++++|+.|+.|++||+.+++++.++.+|...|.+++|
T Consensus       177 -~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~v~~~~~  255 (317)
T d1vyhc1         177 -CKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLF  255 (317)
T ss_dssp             -EEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEE
T ss_pred             -eeEEEecCCCCceEEEEeeccccceeeccccceeeeeccCCceeEeccCCCEEEEEECCCCcEEEEEeCCCCCEEEEEE
Confidence             577888999999999998753                    47899999999999999999999999999999999999


Q ss_pred             cCCCCcEEEEEcCCCCCeEEEEECCCCcEEEEee-CCCCEEEEEECCCCCeEEEEEecCCCcEEEEE
Q 014934          342 SPHLHGLLASGGGTADRCIRFWNTTTNTHLSCMD-TGSQVCNLVWSKNVNELVSTHGYSQNQIIVWR  407 (415)
Q Consensus       342 sp~~~~llasggg~~d~~I~iwd~~t~~~~~~~~-~~~~V~~l~~s~~~~~l~s~~g~~dg~I~vw~  407 (415)
                      +|+++ +|++++  .|+.|++||+.+++++..+. |...|++++|+|++++|++  |+.||+|+|||
T Consensus       256 ~~~~~-~l~s~~--~dg~i~iwd~~~~~~~~~~~~h~~~V~~~~~s~~~~~l~s--~s~Dg~i~iWd  317 (317)
T d1vyhc1         256 HSGGK-FILSCA--DDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVT--GSVDQTVKVWE  317 (317)
T ss_dssp             CSSSS-CEEEEE--TTTEEEEECCTTSCCCEEEECCSSCEEEEEECSSSSCEEE--EETTSEEEEEC
T ss_pred             CCCCC-EEEEEE--CCCeEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEE--EeCCCeEEEeC
Confidence            99987 556665  79999999999999998887 6789999999999999998  77899999997


No 7  
>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]}
Probab=100.00  E-value=2.1e-32  Score=263.54  Aligned_cols=236  Identities=12%  Similarity=0.219  Sum_probs=198.9

Q ss_pred             ceeEeecCC-CcEEEEE-cCCeEEEEECCCCCeEEeEec-CCCCCeEEEEEcCCCCeEEEEECCCcEEEEECCCCee--e
Q 014934          169 YLNLVDWSS-HNVLAVG-LGNCVYLWNACSSKVTKLCDL-GIDDSVCSVGWANRNTHLAVGTSHGKVQIWDASRCKR--V  243 (415)
Q Consensus       169 ~i~~l~ws~-~~~la~~-~d~~V~iwd~~~~~~~~~~~~-~~~~~V~~v~~sp~g~~la~g~~dg~V~iwd~~~~~~--~  243 (415)
                      .|+|++|+| +.+||++ .++.|+||+..+++......+ +|.+.|++++|+|++++|++|+.||.|+|||+.++..  .
T Consensus         9 pIt~~~~s~dg~~la~~~~~~~i~iw~~~~~~~~~~~~l~gH~~~V~~l~fsp~~~~l~s~s~D~~i~vWd~~~~~~~~~   88 (371)
T d1k8kc_           9 PISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTWKPT   88 (371)
T ss_dssp             CCCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEETTEEEEE
T ss_pred             CeEEEEECCCCCEEEEEeCCCEEEEEECCCCCEEEEEEecCCCCCEEEEEECCCCCEEEEEECCCeEEEEeecccccccc
Confidence            388999999 7788877 468999999988875444433 8999999999999999999999999999999987653  4


Q ss_pred             EEecCCCccEEEEEee--CCEEEEEeCCCcEEEEECCCCCcc---EEEeccccCCeEEEEEeCCCCEEEEEeCCCcEEEE
Q 014934          244 RTMEGHRLRVGALAWS--SSLLSSGSRDKSILQRDIRAQEDF---VSKLSGHKSEVCGLKWSYDNRELASGGNDNRLFVW  318 (415)
Q Consensus       244 ~~l~~h~~~V~~l~~~--~~~l~sgs~dg~I~iwd~~~~~~~---~~~~~~h~~~V~~l~~spdg~~lasg~~dg~I~iw  318 (415)
                      ..+.+|...|.+++|+  ++.|++|+.|++|++|++......   ......|...|.+++|+|++++||+|+.|+.|++|
T Consensus        89 ~~~~~~~~~v~~i~~~p~~~~l~~~s~d~~i~i~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~l~s~s~D~~v~v~  168 (371)
T d1k8kc_          89 LVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIF  168 (371)
T ss_dssp             EECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETTSCEEEE
T ss_pred             cccccccccccccccccccccceeecccCcceeeeeecccccccccccccccccccccccccccccceeccccCcEEEEE
Confidence            4567889999999998  579999999999999998776532   34456789999999999999999999999999999


Q ss_pred             ECCCC------------------ceeEEeccCCCcEEEEEEcCCCCcEEEEEcCCCCCeEEEEECCCCcEEEEee-CCCC
Q 014934          319 NQHST------------------QPVLKYCEHTAAVKAIAWSPHLHGLLASGGGTADRCIRFWNTTTNTHLSCMD-TGSQ  379 (415)
Q Consensus       319 d~~~~------------------~~~~~~~~h~~~V~~l~~sp~~~~llasggg~~d~~I~iwd~~t~~~~~~~~-~~~~  379 (415)
                      |....                  ..+.....|...|.+++|+|+++ .|++++  .|+.|++||+.+++.+..+. +..+
T Consensus       169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~-~l~s~~--~d~~i~iwd~~~~~~~~~~~~~~~~  245 (371)
T d1k8kc_         169 SAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGS-RVAWVS--HDSTVCLADADKKMAVATLASETLP  245 (371)
T ss_dssp             ECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSS-EEEEEE--TTTEEEEEEGGGTTEEEEEECSSCC
T ss_pred             eeccCccccccccccccccccceeeeeeccCccCcEEEEEeecccc-cccccc--cCCcceEEeeecccceeeeeccccc
Confidence            97642                  34566678999999999999987 667776  79999999999999988887 5678


Q ss_pred             EEEEEECCCCCeEEEEEecCCCcEEEEECCC
Q 014934          380 VCNLVWSKNVNELVSTHGYSQNQIIVWRYPT  410 (415)
Q Consensus       380 V~~l~~s~~~~~l~s~~g~~dg~I~vw~~~s  410 (415)
                      |.+++|+++++.|++  | .|+.+.+|.+..
T Consensus       246 v~s~~fs~d~~~la~--g-~d~~~~~~~~~~  273 (371)
T d1k8kc_         246 LLAVTFITESSLVAA--G-HDCFPVLFTYDS  273 (371)
T ss_dssp             EEEEEEEETTEEEEE--E-TTSSCEEEEEET
T ss_pred             ceeeeecCCCCEEEE--E-cCCceEEEEeeC
Confidence            999999999987776  5 477777776654


No 8  
>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=100.00  E-value=2.5e-31  Score=255.32  Aligned_cols=242  Identities=20%  Similarity=0.308  Sum_probs=199.5

Q ss_pred             CcceeEeecCC-CcEEEEEcCCeEEEEECCCCCeEEeEe-----------------cCCCCCeEEEEEcCCCCeEEEEEC
Q 014934          167 DFYLNLVDWSS-HNVLAVGLGNCVYLWNACSSKVTKLCD-----------------LGIDDSVCSVGWANRNTHLAVGTS  228 (415)
Q Consensus       167 ~~~i~~l~ws~-~~~la~~~d~~V~iwd~~~~~~~~~~~-----------------~~~~~~V~~v~~sp~g~~la~g~~  228 (415)
                      .-.|+||+|+| +++||+|.|+.|+|||+.+++....+.                 ..|...|++++|+|+|++|++|+.
T Consensus        62 ~~~V~~l~fs~dg~~lasg~d~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~~~~l~s~~~  141 (388)
T d1erja_          62 TSVVCCVKFSNDGEYLATGCNKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLATGAE  141 (388)
T ss_dssp             SSCCCEEEECTTSSEEEEECBSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTTSSEEEEEET
T ss_pred             CCcEEEEEECCCCCEEEEEeCCeEEEEEecccceEeeecccccccccccccccccccCCCCCEEEEEECCCCCcceeccc
Confidence            34699999999 789999999999999999988765542                 145677999999999999999999


Q ss_pred             CCcEEEEECCCCeeeEEecCCCccEEEEEee--CCEEEEEeCCCcEEEEECCCCCccEEEeccccCCeEEEEEeCCCCEE
Q 014934          229 HGKVQIWDASRCKRVRTMEGHRLRVGALAWS--SSLLSSGSRDKSILQRDIRAQEDFVSKLSGHKSEVCGLKWSYDNREL  306 (415)
Q Consensus       229 dg~V~iwd~~~~~~~~~l~~h~~~V~~l~~~--~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~spdg~~l  306 (415)
                      ||.|++||...++.+..+.+|...|.+++|+  +..+++|+.++.|++||.+... .......+...++...+.+++++|
T Consensus       142 dg~v~i~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l  220 (388)
T d1erja_         142 DRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQ-CSLTLSIEDGVTTVAVSPGDGKYI  220 (388)
T ss_dssp             TSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTE-EEEEEECSSCEEEEEECSTTCCEE
T ss_pred             ccccccccccccccccccccccccccccccccccccccccccceeeeeeeccccc-cccccccccccccccccCCCCCeE
Confidence            9999999999999999999999999999998  4789999999999999999876 344444444444444444589999


Q ss_pred             EEEeCCCcEEEEECCCCceeEEe-------ccCCCcEEEEEEcCCCCcEEEEEcCCCCCeEEEEECCCCcEEE-------
Q 014934          307 ASGGNDNRLFVWNQHSTQPVLKY-------CEHTAAVKAIAWSPHLHGLLASGGGTADRCIRFWNTTTNTHLS-------  372 (415)
Q Consensus       307 asg~~dg~I~iwd~~~~~~~~~~-------~~h~~~V~~l~~sp~~~~llasggg~~d~~I~iwd~~t~~~~~-------  372 (415)
                      ++|+.|+.|++||..++..+..+       .+|...|.+++|+|++. +|++++  .|+.|++||+.++....       
T Consensus       221 ~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~-~l~s~~--~d~~i~iwd~~~~~~~~~~~~~~~  297 (388)
T d1erja_         221 AAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQ-SVVSGS--LDRSVKLWNLQNANNKSDSKTPNS  297 (388)
T ss_dssp             EEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSS-EEEEEE--TTSEEEEEEC--------------
T ss_pred             EEEcCCCeEEEeecccCccceeeccccccccCCCCCEEEEEECCCCC-EEEEEE--CCCcEEEEeccCCccccccccccc
Confidence            99999999999999998776665       35889999999999987 666666  79999999998764322       


Q ss_pred             ------EeeCCCCEEEEEECCCCCeEEEEEecCCCcEEEEECCCCccc
Q 014934          373 ------CMDTGSQVCNLVWSKNVNELVSTHGYSQNQIIVWRYPTMSKV  414 (415)
Q Consensus       373 ------~~~~~~~V~~l~~s~~~~~l~s~~g~~dg~I~vw~~~s~~~l  414 (415)
                            ...+...|.+++|++++++|++  |+.||.|++||+.+++++
T Consensus       298 ~~~~~~~~~~~~~v~~~~~s~~~~~l~s--g~~dg~i~vwd~~~~~~~  343 (388)
T d1erja_         298 GTCEVTYIGHKDFVLSVATTQNDEYILS--GSKDRGVLFWDKKSGNPL  343 (388)
T ss_dssp             -CEEEEEECCSSCEEEEEECGGGCEEEE--EETTSEEEEEETTTCCEE
T ss_pred             cceeeecccccceEEEEEECCCCCEEEE--EeCCCEEEEEECCCCcEE
Confidence                  2235678999999999999998  789999999999988754


No 9  
>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=100.00  E-value=1.6e-30  Score=249.66  Aligned_cols=240  Identities=20%  Similarity=0.364  Sum_probs=198.6

Q ss_pred             CCCcceeEeecCC-CcEEEEE-cCCeEEEEECCCCCeEEeEecCCCCCeEEEEEcCCCCeEEEEECCCcEEEEECCCCee
Q 014934          165 QDDFYLNLVDWSS-HNVLAVG-LGNCVYLWNACSSKVTKLCDLGIDDSVCSVGWANRNTHLAVGTSHGKVQIWDASRCKR  242 (415)
Q Consensus       165 ~~~~~i~~l~ws~-~~~la~~-~d~~V~iwd~~~~~~~~~~~~~~~~~V~~v~~sp~g~~la~g~~dg~V~iwd~~~~~~  242 (415)
                      ..+..|++++|+| +++|++| .|+.|++|+...++...... +|...|.++.|++++..+++|+.+|.|++||..+...
T Consensus       119 ~~~~~V~~l~~s~~~~~l~s~~~dg~v~i~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~  197 (388)
T d1erja_         119 SSDLYIRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQ-GHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQC  197 (388)
T ss_dssp             CCCCBEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEEC-CCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEE
T ss_pred             CCCCCEEEEEECCCCCcceecccccccccccccccccccccc-cccccccccccccccccccccccceeeeeeecccccc
Confidence            3456799999999 6777766 68999999999998877765 7899999999999999999999999999999999888


Q ss_pred             eEEecCCCccEEEEEee--CCEEEEEeCCCcEEEEECCCCCccE------EEeccccCCeEEEEEeCCCCEEEEEeCCCc
Q 014934          243 VRTMEGHRLRVGALAWS--SSLLSSGSRDKSILQRDIRAQEDFV------SKLSGHKSEVCGLKWSYDNRELASGGNDNR  314 (415)
Q Consensus       243 ~~~l~~h~~~V~~l~~~--~~~l~sgs~dg~I~iwd~~~~~~~~------~~~~~h~~~V~~l~~spdg~~lasg~~dg~  314 (415)
                      ......+...+....+.  +.+|++|+.||.|++||.++.....      ....+|...|.+++|+|++++|++|+.|+.
T Consensus       198 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~d~~  277 (388)
T d1erja_         198 SLTLSIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRS  277 (388)
T ss_dssp             EEEEECSSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSE
T ss_pred             ccccccccccccccccCCCCCeEEEEcCCCeEEEeecccCccceeeccccccccCCCCCEEEEEECCCCCEEEEEECCCc
Confidence            87777665554444433  5799999999999999999876321      123468899999999999999999999999


Q ss_pred             EEEEECCCCc------------eeEEeccCCCcEEEEEEcCCCCcEEEEEcCCCCCeEEEEECCCCcEEEEee-CCCCEE
Q 014934          315 LFVWNQHSTQ------------PVLKYCEHTAAVKAIAWSPHLHGLLASGGGTADRCIRFWNTTTNTHLSCMD-TGSQVC  381 (415)
Q Consensus       315 I~iwd~~~~~------------~~~~~~~h~~~V~~l~~sp~~~~llasggg~~d~~I~iwd~~t~~~~~~~~-~~~~V~  381 (415)
                      |++||+.++.            .......|...|.+++|+|+++ +|++|+  .|+.|++||+.+++++..+. |...|.
T Consensus       278 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~sg~--~dg~i~vwd~~~~~~~~~l~~H~~~V~  354 (388)
T d1erja_         278 VKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDE-YILSGS--KDRGVLFWDKKSGNPLLMLQGHRNSVI  354 (388)
T ss_dssp             EEEEEC---------------CEEEEEECCSSCEEEEEECGGGC-EEEEEE--TTSEEEEEETTTCCEEEEEECCSSCEE
T ss_pred             EEEEeccCCccccccccccccceeeecccccceEEEEEECCCCC-EEEEEe--CCCEEEEEECCCCcEEEEEeCCCCCEE
Confidence            9999997643            3445557899999999999987 666766  89999999999999999887 677899


Q ss_pred             EEEE------CCCCCeEEEEEecCCCcEEEEECCC
Q 014934          382 NLVW------SKNVNELVSTHGYSQNQIIVWRYPT  410 (415)
Q Consensus       382 ~l~~------s~~~~~l~s~~g~~dg~I~vw~~~s  410 (415)
                      ++++      +|++++|++  |+.||.|+||+++.
T Consensus       355 ~~~~~~~~~~spd~~~l~s--~s~Dg~I~iW~~~k  387 (388)
T d1erja_         355 SVAVANGSSLGPEYNVFAT--GSGDCKARIWKYKK  387 (388)
T ss_dssp             EEEECSSCTTCTTCEEEEE--EETTSEEEEEEEEE
T ss_pred             EEEEecCcccCCCCCEEEE--EeCCCEEEEEeeee
Confidence            8875      678888988  77899999999854


No 10 
>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]}
Probab=99.97  E-value=1e-29  Score=235.90  Aligned_cols=236  Identities=15%  Similarity=0.233  Sum_probs=183.9

Q ss_pred             CcceeEeecCC-CcEEEEE-cCCeEEEEECCCCCeEEeEecCCCCCeEEEEEcCCCCeEEEEECCCcEEEEECCCCee--
Q 014934          167 DFYLNLVDWSS-HNVLAVG-LGNCVYLWNACSSKVTKLCDLGIDDSVCSVGWANRNTHLAVGTSHGKVQIWDASRCKR--  242 (415)
Q Consensus       167 ~~~i~~l~ws~-~~~la~~-~d~~V~iwd~~~~~~~~~~~~~~~~~V~~v~~sp~g~~la~g~~dg~V~iwd~~~~~~--  242 (415)
                      .-.|++++|+| +++|++| .|+.|++||+.+++....+...|...|++++|+|+|.++ +++.|+.+++|+......  
T Consensus        12 ~~~V~~l~~s~dg~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~h~~~v~~v~~~~~g~~~-~~~~d~~v~~~~~~~~~~~~   90 (299)
T d1nr0a2          12 NKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKTTSKGDLF-TVSWDDHLKVVPAGGSGVDS   90 (299)
T ss_dssp             SSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEECSSCSCSSCEEEEEECTTSCEE-EEETTTEEEEECSSSSSSCT
T ss_pred             CCCcEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEcCCCCCcEEEEEeeccceee-cccceeeEEEeccCCccccc
Confidence            34699999999 6777766 689999999999998877755788999999999999754 567799999998642110  


Q ss_pred             -----------e--------------------EEec-------CCCccEEEEEee--CCEEEEEeCCCcEEEEECCCCCc
Q 014934          243 -----------V--------------------RTME-------GHRLRVGALAWS--SSLLSSGSRDKSILQRDIRAQED  282 (415)
Q Consensus       243 -----------~--------------------~~l~-------~h~~~V~~l~~~--~~~l~sgs~dg~I~iwd~~~~~~  282 (415)
                                 +                    ..+.       .....+.+++|+  +.+|++|+.||.|++||+++...
T Consensus        91 ~~~~~~~~~~~~~~~~~s~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~~~d~~~~~~  170 (299)
T d1nr0a2          91 SKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIYSHGKLTEVPISYNSSCVALSNDKQFVAVGGQDSKVHVYKLSGASV  170 (299)
T ss_dssp             TSCCEEECSSCEEEEEECTTSSCEEEEESSEEEEEETTEEEEEECSSCEEEEEECTTSCEEEEEETTSEEEEEEEETTEE
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence                       0                    0000       122346667776  46899999999999999987763


Q ss_pred             cEEEeccccCCeEEEEEeCCCCEEEEEeCCCcEEEEECCCCcee---EEeccCCCcEEEEEEcCCCCcEEEEEcCCCCCe
Q 014934          283 FVSKLSGHKSEVCGLKWSYDNRELASGGNDNRLFVWNQHSTQPV---LKYCEHTAAVKAIAWSPHLHGLLASGGGTADRC  359 (415)
Q Consensus       283 ~~~~~~~h~~~V~~l~~spdg~~lasg~~dg~I~iwd~~~~~~~---~~~~~h~~~V~~l~~sp~~~~llasggg~~d~~  359 (415)
                      .......|...|.+++|+|++++|++++.|+.|++||+.++..+   ..+..|...|.+++|+|++. +|++|+  .|+.
T Consensus       171 ~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~-~l~sgs--~dg~  247 (299)
T d1nr0a2         171 SEVKTIVHPAEITSVAFSNNGAFLVATDQSRKVIPYSVANNFELAHTNSWTFHTAKVACVSWSPDNV-RLATGS--LDNS  247 (299)
T ss_dssp             EEEEEEECSSCEEEEEECTTSSEEEEEETTSCEEEEEGGGTTEESCCCCCCCCSSCEEEEEECTTSS-EEEEEE--TTSC
T ss_pred             ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc-ceEEEc--CCCE
Confidence            33455678999999999999999999999999999999877544   34567999999999999987 777776  8999


Q ss_pred             EEEEECCCCcEEEEee----CCCCEEEEEECCCCCeEEEEEecCCCcEEEEECC
Q 014934          360 IRFWNTTTNTHLSCMD----TGSQVCNLVWSKNVNELVSTHGYSQNQIIVWRYP  409 (415)
Q Consensus       360 I~iwd~~t~~~~~~~~----~~~~V~~l~~s~~~~~l~s~~g~~dg~I~vw~~~  409 (415)
                      |++||+.++.....+.    +...|..+.| +++++|++  |+.|+.|++||++
T Consensus       248 i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~l~s--~s~D~~i~iWdl~  298 (299)
T d1nr0a2         248 VIVWNMNKPSDHPIIIKGAHAMSSVNSVIW-LNETTIVS--AGQDSNIKFWNVP  298 (299)
T ss_dssp             EEEEETTCTTSCCEEETTSSTTSCEEEEEE-EETTEEEE--EETTSCEEEEECC
T ss_pred             EEEEECCCCCcceEEEecCCCCCcEEEEEE-CCCCEEEE--EeCCCEEEEEecc
Confidence            9999999875433322    2345666655 56778888  6789999999986


No 11 
>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]}
Probab=99.97  E-value=1.5e-29  Score=243.39  Aligned_cols=241  Identities=17%  Similarity=0.206  Sum_probs=192.8

Q ss_pred             cceeEeecCC-CcEEEEE-cCCeEEEEECCCCCeEEeEec-CCCCCeEEEEEcCCCCeEEEEECCCcEEEEECCCCe---
Q 014934          168 FYLNLVDWSS-HNVLAVG-LGNCVYLWNACSSKVTKLCDL-GIDDSVCSVGWANRNTHLAVGTSHGKVQIWDASRCK---  241 (415)
Q Consensus       168 ~~i~~l~ws~-~~~la~~-~d~~V~iwd~~~~~~~~~~~~-~~~~~V~~v~~sp~g~~la~g~~dg~V~iwd~~~~~---  241 (415)
                      -.|++++|+| +++|+++ .|+.|+|||+.++.......+ +|...|++++|+|++++|++|+.||.|++|++....   
T Consensus        52 ~~V~~l~fsp~~~~l~s~s~D~~i~vWd~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~l~~~s~d~~i~i~~~~~~~~~~  131 (371)
T d1k8kc_          52 GQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWW  131 (371)
T ss_dssp             SCEEEEEEETTTTEEEEEETTSCEEEEEEETTEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEE
T ss_pred             CCEEEEEECCCCCEEEEEECCCeEEEEeecccccccccccccccccccccccccccccceeecccCcceeeeeecccccc
Confidence            4699999999 6777765 679999999988876655544 678899999999999999999999999999986543   


Q ss_pred             -eeEEecCCCccEEEEEee--CCEEEEEeCCCcEEEEECCCCC-----------------ccEEEeccccCCeEEEEEeC
Q 014934          242 -RVRTMEGHRLRVGALAWS--SSLLSSGSRDKSILQRDIRAQE-----------------DFVSKLSGHKSEVCGLKWSY  301 (415)
Q Consensus       242 -~~~~l~~h~~~V~~l~~~--~~~l~sgs~dg~I~iwd~~~~~-----------------~~~~~~~~h~~~V~~l~~sp  301 (415)
                       .......|...|.+++|+  +.+|++|+.|++|++||.....                 .......+|...|.+++|+|
T Consensus       132 ~~~~~~~~~~~~v~~v~~~p~~~~l~s~s~D~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~  211 (371)
T d1k8kc_         132 VCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSA  211 (371)
T ss_dssp             EEEEECTTCCSCEEEEEECTTSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECS
T ss_pred             cccccccccccccccccccccccceeccccCcEEEEEeeccCccccccccccccccccceeeeeeccCccCcEEEEEeec
Confidence             234456799999999998  4799999999999999986432                 23455678899999999999


Q ss_pred             CCCEEEEEeCCCcEEEEECCCCceeEEeccCCCcEEEEEEcCCCCcEEEEEcCCCCCeEEEEECC--CCcEEEE------
Q 014934          302 DNRELASGGNDNRLFVWNQHSTQPVLKYCEHTAAVKAIAWSPHLHGLLASGGGTADRCIRFWNTT--TNTHLSC------  373 (415)
Q Consensus       302 dg~~lasg~~dg~I~iwd~~~~~~~~~~~~h~~~V~~l~~sp~~~~llasggg~~d~~I~iwd~~--t~~~~~~------  373 (415)
                      ++++||+++.|+.|++||+.+++.+..+..|..+|.+++|+|++. ++++|   .|+.+++|...  .+.....      
T Consensus       212 ~g~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~s~~fs~d~~-~la~g---~d~~~~~~~~~~~~~~~~~~~~~~~~  287 (371)
T d1k8kc_         212 NGSRVAWVSHDSTVCLADADKKMAVATLASETLPLLAVTFITESS-LVAAG---HDCFPVLFTYDSAAGKLSFGGRLDVP  287 (371)
T ss_dssp             SSSEEEEEETTTEEEEEEGGGTTEEEEEECSSCCEEEEEEEETTE-EEEEE---TTSSCEEEEEETTTTEEEECCCCCCC
T ss_pred             ccccccccccCCcceEEeeecccceeeeecccccceeeeecCCCC-EEEEE---cCCceEEEEeeCCCceEEEeeeecCc
Confidence            999999999999999999999999999999999999999999985 77776   47776665543  2221100      


Q ss_pred             --------------------------------e--eCCCCEEEEEECCCCC----eEEEEEecCCCcEEEEECCCCccc
Q 014934          374 --------------------------------M--DTGSQVCNLVWSKNVN----ELVSTHGYSQNQIIVWRYPTMSKV  414 (415)
Q Consensus       374 --------------------------------~--~~~~~V~~l~~s~~~~----~l~s~~g~~dg~I~vw~~~s~~~l  414 (415)
                                                      +  .|.+.|+++++.+.+.    .+++  ++.||.|+|||++++++.
T Consensus       288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~I~~i~~~~~~~~~~~~~~T--~g~Dg~v~iW~~~~~~~~  364 (371)
T d1k8kc_         288 KQSSQRGLTARERFQNLDKKASSEGSAAAGAGLDSLHKNSVSQISVLSGGKAKCSQFCT--TGMDGGMSIWDVRSLESA  364 (371)
T ss_dssp             --------CHHHHHHHCCCCC---------CCCSSSSSSCEEEEEEEESTTTSCSEEEE--EETTSEEEEEEHHHHHHH
T ss_pred             cccccccccceeeEecccceeEEeccccccceecccccCCEEEEEEeCCCCcceEEEEE--EcCCCeEEEEeCCcChhh
Confidence                                            0  0445789999877543    3555  678999999999876543


No 12 
>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.97  E-value=8.8e-29  Score=228.14  Aligned_cols=204  Identities=23%  Similarity=0.382  Sum_probs=184.6

Q ss_pred             CCCCCeEEEEEcCCCCeEEEEECCCcEEEEECCCCeeeEEecCCCccEEEEEeeC-------------------------
Q 014934          206 GIDDSVCSVGWANRNTHLAVGTSHGKVQIWDASRCKRVRTMEGHRLRVGALAWSS-------------------------  260 (415)
Q Consensus       206 ~~~~~V~~v~~sp~g~~la~g~~dg~V~iwd~~~~~~~~~l~~h~~~V~~l~~~~-------------------------  260 (415)
                      +|.+.|++|+|+|++++||+|+.||+|+|||+.+++.+.++.+|...|.+++|++                         
T Consensus        15 GH~~~I~~l~~sp~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~h~~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   94 (317)
T d1vyhc1          15 GHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECI   94 (317)
T ss_dssp             CCSSCEEEEEECSSSSEEEEEESSSCEEEEETTTCCCCEEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEETTSSCEE
T ss_pred             CCCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCCEEEEEeCCCCcEEEEeeecccccccccccccccccccccccccc
Confidence            8999999999999999999999999999999999999999999998888887752                         


Q ss_pred             -------------------CEEEEEeCCCcEEEEECCCCCccEEEeccccCCeEEEEEeCCCCEEEEEeCCCcEEEEECC
Q 014934          261 -------------------SLLSSGSRDKSILQRDIRAQEDFVSKLSGHKSEVCGLKWSYDNRELASGGNDNRLFVWNQH  321 (415)
Q Consensus       261 -------------------~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~spdg~~lasg~~dg~I~iwd~~  321 (415)
                                         +.+++++.|+.+++||++++. ....+.+|...+.+++|+|++++|++|+.|+.|++|++.
T Consensus        95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~~~~~~  173 (317)
T d1vyhc1          95 RTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGY-CVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVA  173 (317)
T ss_dssp             ECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCC-EEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETT
T ss_pred             cccccccccceeeeccCCCceEEeeccCcceeEeecccce-eeeEEccCCCcceeeecccCCCEEEEEeCCCeEEEEeec
Confidence                               247888999999999999887 577888999999999999999999999999999999999


Q ss_pred             CCceeEEeccCCCcEEEEEEcCCCC-------------------cEEEEEcCCCCCeEEEEECCCCcEEEEee-CCCCEE
Q 014934          322 STQPVLKYCEHTAAVKAIAWSPHLH-------------------GLLASGGGTADRCIRFWNTTTNTHLSCMD-TGSQVC  381 (415)
Q Consensus       322 ~~~~~~~~~~h~~~V~~l~~sp~~~-------------------~llasggg~~d~~I~iwd~~t~~~~~~~~-~~~~V~  381 (415)
                      +++.+..+.+|...+.+++|+|++.                   .++++++  .|+.|++||+.+++++..+. +...|.
T Consensus       174 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~d~~i~~~~~~~~~~~~~~~~~~~~v~  251 (317)
T d1vyhc1         174 TKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGS--RDKTIKMWDVSTGMCLMTLVGHDNWVR  251 (317)
T ss_dssp             TCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEE--TTSEEEEEETTTTEEEEEEECCSSCEE
T ss_pred             cceeeEEEecCCCCceEEEEeeccccceeeccccceeeeeccCCceeEecc--CCCEEEEEECCCCcEEEEEeCCCCCEE
Confidence            9999999999999999999998753                   2566666  89999999999999988886 678899


Q ss_pred             EEEECCCCCeEEEEEecCCCcEEEEECCCCccc
Q 014934          382 NLVWSKNVNELVSTHGYSQNQIIVWRYPTMSKV  414 (415)
Q Consensus       382 ~l~~s~~~~~l~s~~g~~dg~I~vw~~~s~~~l  414 (415)
                      +++|+|++++|++  |+.||.|+|||+.+++.+
T Consensus       252 ~~~~~~~~~~l~s--~~~dg~i~iwd~~~~~~~  282 (317)
T d1vyhc1         252 GVLFHSGGKFILS--CADDKTLRVWDYKNKRCM  282 (317)
T ss_dssp             EEEECSSSSCEEE--EETTTEEEEECCTTSCCC
T ss_pred             EEEECCCCCEEEE--EECCCeEEEEECCCCcEE
Confidence            9999999999998  778999999999987653


No 13 
>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.97  E-value=6.4e-28  Score=225.02  Aligned_cols=241  Identities=20%  Similarity=0.376  Sum_probs=191.1

Q ss_pred             CCceeccCCCCCCCcceeEeecCCCcEEEEEcCCeEEEEECCCCCeEEeEecCCCCCeEEEEEcCCCCeEEEEECCCcEE
Q 014934          154 SPYKILDAPALQDDFYLNLVDWSSHNVLAVGLGNCVYLWNACSSKVTKLCDLGIDDSVCSVGWANRNTHLAVGTSHGKVQ  233 (415)
Q Consensus       154 ~p~~~ld~~~l~~~~~i~~l~ws~~~~la~~~d~~V~iwd~~~~~~~~~~~~~~~~~V~~v~~sp~g~~la~g~~dg~V~  233 (415)
                      .+.++|..+.   +..+.|++|+.+.+++++.|+.|+|||+.++++...+. +|...|.+++|+++  +|++|+.|+.++
T Consensus         7 ~~~~~l~GH~---~~V~s~~~~~g~~l~sgs~Dg~i~vWd~~~~~~~~~~~-~h~~~V~~v~~~~~--~l~s~s~D~~~~   80 (342)
T d2ovrb2           7 KSPKVLKGHD---DHVITCLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLV-GHTGGVWSSQMRDN--IIISGSTDRTLK   80 (342)
T ss_dssp             CCCEEEECST---TSCEEEEEEETTEEEEEETTSCEEEEETTTCCEEEECC-CCSSCEEEEEEETT--EEEEEETTSCEE
T ss_pred             CcCEEECCcC---CceEEEEEECCCEEEEEeCCCeEEEEECCCCCEEEEEe-CCCCCEEEEEeCCC--ccccceeccccc
Confidence            3445666532   33356788875544445578999999999999888775 89999999999864  888888888777


Q ss_pred             EEECCC--------------------------------------------------------------------------
Q 014934          234 IWDASR--------------------------------------------------------------------------  239 (415)
Q Consensus       234 iwd~~~--------------------------------------------------------------------------  239 (415)
                      +|+...                                                                          
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~  160 (342)
T d2ovrb2          81 VWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVK  160 (342)
T ss_dssp             EEETTTTEEEEEECCCSSCEEEEEEETTEEEEEETTSEEEEEESSSCCEEEEEECCSSCEEEEEECSSCEEEEETTSCEE
T ss_pred             ccccccccceecccccceeEeeeecccccccccccceeEEEeecccccceeeeecccccceeeccccceeeeecCCCeEE
Confidence            776432                                                                          


Q ss_pred             ------CeeeEEecCCCccEEEEEeeCCEEEEEeCCCcEEEEECCCCCccEEEeccccCCeEEEEEeCCCCEEEEEeCCC
Q 014934          240 ------CKRVRTMEGHRLRVGALAWSSSLLSSGSRDKSILQRDIRAQEDFVSKLSGHKSEVCGLKWSYDNRELASGGNDN  313 (415)
Q Consensus       240 ------~~~~~~l~~h~~~V~~l~~~~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~spdg~~lasg~~dg  313 (415)
                            .+.+..+.+|...+..+.+++..|++|+.||.|++||++... .+..+.+|...|.++.++  +++|++|+.|+
T Consensus       161 ~~d~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~~~d~~~~~-~~~~~~~~~~~v~~~~~~--~~~l~s~s~d~  237 (342)
T d2ovrb2         161 VWDPETETCLHTLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGN-CIHTLTGHQSLTSGMELK--DNILVSGNADS  237 (342)
T ss_dssp             EEEGGGTEEEEEECCCSSCEEEEEECSSEEEEEETTSCEEEEETTTCC-EEEEECCCCSCEEEEEEE--TTEEEEEETTS
T ss_pred             EeecccceeeEEEcCcccccccccCCCCEEEEEeCCCeEEEeecccce-eeeEecccccceeEEecC--CCEEEEEcCCC
Confidence                  222233345666677777778899999999999999999887 678889999999988876  46999999999


Q ss_pred             cEEEEECCCCceeEEecc---CCCcEEEEEEcCCCCcEEEEEcCCCCCeEEEEECCCCcEEEEee------CCCCEEEEE
Q 014934          314 RLFVWNQHSTQPVLKYCE---HTAAVKAIAWSPHLHGLLASGGGTADRCIRFWNTTTNTHLSCMD------TGSQVCNLV  384 (415)
Q Consensus       314 ~I~iwd~~~~~~~~~~~~---h~~~V~~l~~sp~~~~llasggg~~d~~I~iwd~~t~~~~~~~~------~~~~V~~l~  384 (415)
                      .|++||+...+....+..   |...+.++.++++   ++++++  .||.|++||+++++++..+.      +...|.+++
T Consensus       238 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~s~s--~Dg~i~iwd~~tg~~i~~~~~~~~~~~~~~v~~v~  312 (342)
T d2ovrb2         238 TVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKN---FVITSS--DDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIR  312 (342)
T ss_dssp             CEEEEETTTCCEEEEECSTTSCSSCEEEEEECSS---EEEEEE--TTSEEEEEETTTCCEEEEEEECTTGGGTCEEEEEE
T ss_pred             EEEEEecccccccccccccceeeeceeecccCCC---eeEEEc--CCCEEEEEECCCCCEEEEEecccCCCCCCCEEEEE
Confidence            999999999888777764   5677888888754   777777  89999999999999988774      345699999


Q ss_pred             ECCCCCeEEEEEecCCCc----EEEEECCC
Q 014934          385 WSKNVNELVSTHGYSQNQ----IIVWRYPT  410 (415)
Q Consensus       385 ~s~~~~~l~s~~g~~dg~----I~vw~~~s  410 (415)
                      |+|++..|++  |+.||+    |++||+..
T Consensus       313 ~s~~~~~la~--g~~dGt~~~~l~~~Df~~  340 (342)
T d2ovrb2         313 ASNTKLVCAV--GSRNGTEETKLLVLDFDV  340 (342)
T ss_dssp             ECSSEEEEEE--ECSSSSSCCEEEEEECCC
T ss_pred             ECCCCCEEEE--EeCCCCCeeEEEEEeCCC
Confidence            9999988888  777774    99999974


No 14 
>d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.97  E-value=3e-29  Score=237.18  Aligned_cols=235  Identities=16%  Similarity=0.159  Sum_probs=187.4

Q ss_pred             cceeEeecCC---CcEEEEE-cCCeEEEEECCCCCeEEeE-------ecCCCCCeEEEEEcCCCCeEEEEEC--CCcEEE
Q 014934          168 FYLNLVDWSS---HNVLAVG-LGNCVYLWNACSSKVTKLC-------DLGIDDSVCSVGWANRNTHLAVGTS--HGKVQI  234 (415)
Q Consensus       168 ~~i~~l~ws~---~~~la~~-~d~~V~iwd~~~~~~~~~~-------~~~~~~~V~~v~~sp~g~~la~g~~--dg~V~i  234 (415)
                      ..+++++|+|   +.+||+| .|++|+|||...++.....       ...|.+.|.+++|+++|++|++++.  ++.+.+
T Consensus        64 ~~v~~v~fsP~~~g~~lasgs~Dg~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~~~~~~~~~  143 (325)
T d1pgua1          64 SVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVF  143 (325)
T ss_dssp             SCEEEEEECSSTTCCEEEEEETTSEEEEEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEECCSSCSEEE
T ss_pred             CCEEEEEEeeCCCCCEEEEEeCCCCEEEeeecCCcceeeeecccccccccccCcEEEEEECCCCCccceeeccccceEEE
Confidence            4589999997   4588776 5899999998764422111       1157789999999999999988765  678999


Q ss_pred             EECCCCeeeEEecCCCccEEEEEeeC---CEEEEEeCCCcEEEEECCCCCccEE--EeccccCCeEEEEEeCC-CCEEEE
Q 014934          235 WDASRCKRVRTMEGHRLRVGALAWSS---SLLSSGSRDKSILQRDIRAQEDFVS--KLSGHKSEVCGLKWSYD-NRELAS  308 (415)
Q Consensus       235 wd~~~~~~~~~l~~h~~~V~~l~~~~---~~l~sgs~dg~I~iwd~~~~~~~~~--~~~~h~~~V~~l~~spd-g~~las  308 (415)
                      |+..+++.+..+.+|...|.+++|++   .++++++.|+.|++||.........  ....|...|.+++|+|+ +.+|++
T Consensus       144 ~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~v~~v~~~pd~~~~l~s  223 (325)
T d1pgua1         144 ISWDSGNSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVIT  223 (325)
T ss_dssp             EETTTCCEEEECCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBEEEEEECSSSCTTCCEEEEEECSTTCCEEEE
T ss_pred             EeecccccceeeeecccccccccccccccceEEEeecccccccccccccccceecccccCCCCccEEeeeccccceeccc
Confidence            99999999999999999999999983   4688999999999999987652222  23467788999999996 689999


Q ss_pred             EeCCCcEEEEECCCCceeEEeccCCCcEEEEEEc---CCCCcEEEEEcCCCCCeEEEEECCCCcEEEEeeCC-CC----E
Q 014934          309 GGNDNRLFVWNQHSTQPVLKYCEHTAAVKAIAWS---PHLHGLLASGGGTADRCIRFWNTTTNTHLSCMDTG-SQ----V  380 (415)
Q Consensus       309 g~~dg~I~iwd~~~~~~~~~~~~h~~~V~~l~~s---p~~~~llasggg~~d~~I~iwd~~t~~~~~~~~~~-~~----V  380 (415)
                      |+.|+.|++||+++++.+..+.+|...+..+.|+   |++. +|++++  .|+.|+|||+.+++++..+..+ ..    .
T Consensus       224 ~~~d~~i~iwd~~~~~~~~~l~~~~~~v~~~~~s~~~~dg~-~l~s~s--~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~  300 (325)
T d1pgua1         224 VGSDRKISCFDGKSGEFLKYIEDDQEPVQGGIFALSWLDSQ-KFATVG--ADATIRVWDVTTSKCVQKWTLDKQQLGNQQ  300 (325)
T ss_dssp             EETTCCEEEEETTTCCEEEECCBTTBCCCSCEEEEEESSSS-EEEEEE--TTSEEEEEETTTTEEEEEEECCTTCGGGCE
T ss_pred             cccccceeeeeeccccccccccccccccccceeeeeccCCC-EEEEEe--CCCeEEEEECCCCCEEEEEEecCCcccCeE
Confidence            9999999999999999999999888877666555   5665 666766  8999999999999999887632 22    3


Q ss_pred             EEEEECCCCCeEEEEEecCCCcEEEEEC
Q 014934          381 CNLVWSKNVNELVSTHGYSQNQIIVWRY  408 (415)
Q Consensus       381 ~~l~~s~~~~~l~s~~g~~dg~I~vw~~  408 (415)
                      .++.|.+++ .|++  |+.||.|+|||+
T Consensus       301 ~~~~~~~~~-~l~s--~s~dg~i~vwdl  325 (325)
T d1pgua1         301 VGVVATGNG-RIIS--LSLDGTLNFYEL  325 (325)
T ss_dssp             EEEEEEETT-EEEE--EETTSCEEEEET
T ss_pred             EEEEECCCC-EEEE--EECCCEEEEEEC
Confidence            345555444 5666  678999999996


No 15 
>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]}
Probab=99.97  E-value=3e-28  Score=227.99  Aligned_cols=208  Identities=19%  Similarity=0.363  Sum_probs=181.0

Q ss_pred             EeEecCCCCCeEEEEEcCCCCeEEEEECCCcEEEEECCCCeeeEEecCCCccEEEEEee--CCEEEEEeCCCcEEEEECC
Q 014934          201 KLCDLGIDDSVCSVGWANRNTHLAVGTSHGKVQIWDASRCKRVRTMEGHRLRVGALAWS--SSLLSSGSRDKSILQRDIR  278 (415)
Q Consensus       201 ~~~~~~~~~~V~~v~~sp~g~~la~g~~dg~V~iwd~~~~~~~~~l~~h~~~V~~l~~~--~~~l~sgs~dg~I~iwd~~  278 (415)
                      +.+. +|.+.|++|+|+|++++||+|+.||.|+|||+.+++.+..+..|...|.+++|+  +.++++|+.|+.+.+|+..
T Consensus        49 ~tL~-GH~~~I~~l~~s~~~~~l~sgs~Dg~v~iWd~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~~~~~d~~i~~~~~~  127 (340)
T d1tbga_          49 RTLR-GHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLK  127 (340)
T ss_dssp             EEEC-CCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTTEEEEEEECSCSCEEEEEECTTSSEEEEEETTCCEEEEESS
T ss_pred             EEEC-CCCCCEEEEEECCCCCEEEEEECCCceeeeecccceeEEEEecccccEEeeEeeccceeeeeecccceeeccccc
Confidence            4444 899999999999999999999999999999999999999999999999999998  5799999999999999976


Q ss_pred             CCCc---c-----------------------------------------EEEeccccCCeEEEEEeCCCCEEEEEeCCCc
Q 014934          279 AQED---F-----------------------------------------VSKLSGHKSEVCGLKWSYDNRELASGGNDNR  314 (415)
Q Consensus       279 ~~~~---~-----------------------------------------~~~~~~h~~~V~~l~~spdg~~lasg~~dg~  314 (415)
                      ....   .                                         ......+...+....+.+.+.++++|+.|+.
T Consensus       128 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~  207 (340)
T d1tbga_         128 TREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDAS  207 (340)
T ss_dssp             SSCSCCCEEEEECCCSSCEEEEEEEETTEEEEEETTTEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTTE
T ss_pred             ccccccccceecccccccccccccccccccccccccccccccccccccccccccccceeEeeeccccccceeEEeecCce
Confidence            4321   0                                         1112234456778888889999999999999


Q ss_pred             EEEEECCCCceeEEeccCCCcEEEEEEcCCCCcEEEEEcCCCCCeEEEEECCCCcEEEEee---CCCCEEEEEECCCCCe
Q 014934          315 LFVWNQHSTQPVLKYCEHTAAVKAIAWSPHLHGLLASGGGTADRCIRFWNTTTNTHLSCMD---TGSQVCNLVWSKNVNE  391 (415)
Q Consensus       315 I~iwd~~~~~~~~~~~~h~~~V~~l~~sp~~~~llasggg~~d~~I~iwd~~t~~~~~~~~---~~~~V~~l~~s~~~~~  391 (415)
                      |++||+++++++..+.+|...|.+++|+|++. +|++++  .|+.|++||+.....+..+.   +...|.+++|++++++
T Consensus       208 v~i~d~~~~~~~~~~~~h~~~i~~v~~~p~~~-~l~s~s--~d~~i~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~  284 (340)
T d1tbga_         208 AKLWDVREGMCRQTFTGHESDINAICFFPNGN-AFATGS--DDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRL  284 (340)
T ss_dssp             EEEEETTTTEEEEEECCCSSCEEEEEECTTSS-EEEEEE--TTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECSSSCE
T ss_pred             EEEEECCCCcEEEEEeCCCCCeEEEEECCCCC-EEEEEe--CCCeEEEEeecccccccccccccccCceEEEEECCCCCE
Confidence            99999999999999999999999999999987 667776  79999999999998887764   4567999999999999


Q ss_pred             EEEEEecCCCcEEEEECCCCccc
Q 014934          392 LVSTHGYSQNQIIVWRYPTMSKV  414 (415)
Q Consensus       392 l~s~~g~~dg~I~vw~~~s~~~l  414 (415)
                      |++  |+.||.|++||+.+++.+
T Consensus       285 l~~--g~~dg~i~iwd~~~~~~~  305 (340)
T d1tbga_         285 LLA--GYDDFNCNVWDALKADRA  305 (340)
T ss_dssp             EEE--EETTSCEEEEETTTCCEE
T ss_pred             EEE--EECCCEEEEEECCCCcEE
Confidence            999  789999999999987653


No 16 
>d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.97  E-value=3.5e-28  Score=229.75  Aligned_cols=239  Identities=16%  Similarity=0.254  Sum_probs=187.4

Q ss_pred             eeEeecCC-CcEEEEEcCCeEEE--EECCCCCeEEeEec-CC-CCCeEEEEEcC--CCCeEEEEECCCcEEEEECCCCee
Q 014934          170 LNLVDWSS-HNVLAVGLGNCVYL--WNACSSKVTKLCDL-GI-DDSVCSVGWAN--RNTHLAVGTSHGKVQIWDASRCKR  242 (415)
Q Consensus       170 i~~l~ws~-~~~la~~~d~~V~i--wd~~~~~~~~~~~~-~~-~~~V~~v~~sp--~g~~la~g~~dg~V~iwd~~~~~~  242 (415)
                      ..+++|+| ++.|+++.++.+.+  |+...........+ +| ...|++++|+|  +|.+||+|+.||+|+|||+..++.
T Consensus        20 ~t~l~~~~~~~~la~~~~~~~~i~~~~~~~~~~~~~~~~~gh~~~~v~~v~fsP~~~g~~lasgs~Dg~i~iWd~~~~~~   99 (325)
T d1pgua1          20 TTHLSYDPTTNAIAYPCGKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDKE   99 (325)
T ss_dssp             CCCCEEETTTTEEEEEETTEEEEEECCSSCCSSCSEEEECTTTTSCEEEEEECSSTTCCEEEEEETTSEEEEEEEEEEGG
T ss_pred             eEEEEECCCCCEEEEEeCCCEEEEEEeCCCCCccceEEEeCCCCCCEEEEEEeeCCCCCEEEEEeCCCCEEEeeecCCcc
Confidence            46788999 88888887766555  55433332222222 55 57899999998  578999999999999999865432


Q ss_pred             --------eEEecCCCccEEEEEee--CCEEEEEe--CCCcEEEEECCCCCccEEEeccccCCeEEEEEeCCCCE-EEEE
Q 014934          243 --------VRTMEGHRLRVGALAWS--SSLLSSGS--RDKSILQRDIRAQEDFVSKLSGHKSEVCGLKWSYDNRE-LASG  309 (415)
Q Consensus       243 --------~~~l~~h~~~V~~l~~~--~~~l~sgs--~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~spdg~~-lasg  309 (415)
                              ...+..|.++|.+++|+  +..|++++  .++.+.+|+..++. .+..+.+|...|.+++|+|++.+ ++++
T Consensus       100 ~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~h~~~v~~~~~~~~~~~~~~~~  178 (325)
T d1pgua1         100 SNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWDSGN-SLGEVSGHSQRINACHLKQSRPMRSMTV  178 (325)
T ss_dssp             GTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEECCSSCSEEEEETTTCC-EEEECCSCSSCEEEEEECSSSSCEEEEE
T ss_pred             eeeeecccccccccccCcEEEEEECCCCCccceeeccccceEEEEeecccc-cceeeeecccccccccccccccceEEEe
Confidence                    23345788999999998  46776665  47789999998876 67888999999999999998875 6789


Q ss_pred             eCCCcEEEEECCCCceeEEec---cCCCcEEEEEEcCCCCcEEEEEcCCCCCeEEEEECCCCcEEEEee-CCCCEEEEEE
Q 014934          310 GNDNRLFVWNQHSTQPVLKYC---EHTAAVKAIAWSPHLHGLLASGGGTADRCIRFWNTTTNTHLSCMD-TGSQVCNLVW  385 (415)
Q Consensus       310 ~~dg~I~iwd~~~~~~~~~~~---~h~~~V~~l~~sp~~~~llasggg~~d~~I~iwd~~t~~~~~~~~-~~~~V~~l~~  385 (415)
                      +.|+.|++||....+....+.   .|...|.+++|+|++..++++++  .|+.|++||+++++.+..+. +...+..+.|
T Consensus       179 ~~d~~v~~~d~~~~~~~~~~~~~~~~~~~v~~v~~~pd~~~~l~s~~--~d~~i~iwd~~~~~~~~~l~~~~~~v~~~~~  256 (325)
T d1pgua1         179 GDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVG--SDRKISCFDGKSGEFLKYIEDDQEPVQGGIF  256 (325)
T ss_dssp             ETTTEEEEEETTTBEEEEEECSSSCTTCCEEEEEECSTTCCEEEEEE--TTCCEEEEETTTCCEEEECCBTTBCCCSCEE
T ss_pred             ecccccccccccccccceecccccCCCCccEEeeeccccceeccccc--cccceeeeeecccccccccccccccccccee
Confidence            999999999998887666553   56778999999998777888887  89999999999999998886 3344443333


Q ss_pred             C---CCCCeEEEEEecCCCcEEEEECCCCcc
Q 014934          386 S---KNVNELVSTHGYSQNQIIVWRYPTMSK  413 (415)
Q Consensus       386 s---~~~~~l~s~~g~~dg~I~vw~~~s~~~  413 (415)
                      +   +++++|++  ++.|+.|+|||+++.+.
T Consensus       257 s~~~~dg~~l~s--~s~D~~i~iwd~~~~~~  285 (325)
T d1pgua1         257 ALSWLDSQKFAT--VGADATIRVWDVTTSKC  285 (325)
T ss_dssp             EEEESSSSEEEE--EETTSEEEEEETTTTEE
T ss_pred             eeeccCCCEEEE--EeCCCeEEEEECCCCCE
Confidence            3   57889988  77899999999998764


No 17 
>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.96  E-value=2.2e-27  Score=222.58  Aligned_cols=234  Identities=20%  Similarity=0.312  Sum_probs=178.5

Q ss_pred             ceeEeecCCCcEEEEE-cCCeEEEEECCCCCeEEeEecCCCCCeEEEEEcCCCCeEEEEECCCcEEEEECCCCeeeEEec
Q 014934          169 YLNLVDWSSHNVLAVG-LGNCVYLWNACSSKVTKLCDLGIDDSVCSVGWANRNTHLAVGTSHGKVQIWDASRCKRVRTME  247 (415)
Q Consensus       169 ~i~~l~ws~~~~la~~-~d~~V~iwd~~~~~~~~~~~~~~~~~V~~v~~sp~g~~la~g~~dg~V~iwd~~~~~~~~~l~  247 (415)
                      .++|++++. ++|++| .|+.|+|||..+++....+. +|.+.|++++|+++ .+|++|+.||.|++|+....+......
T Consensus        15 vitc~~~~~-~~l~tgs~Dg~i~vWd~~~~~~~~~l~-~H~~~V~~l~~s~~-~~l~s~s~D~~i~iw~~~~~~~~~~~~   91 (355)
T d1nexb2          15 VITCLQFED-NYVITGADDKMIRVYDSINKKFLLQLS-GHDGGVWALKYAHG-GILVSGSTDRTVRVWDIKKGCCTHVFE   91 (355)
T ss_dssp             CEEEEEEET-TEEEEEETTTEEEEEETTTTEEEEEEE-CCSSCEEEEEEETT-TEEEEEETTCCEEEEETTTTEEEEEEC
T ss_pred             cEEEEEECC-CEEEEEeCCCeEEEEECCCCcEEEEEE-CCCCCEEEEEEcCC-CEEEEEecccccccccccccccccccc
Confidence            367888875 455555 68999999999999888876 89999999999985 589999999999999998766554443


Q ss_pred             CCCcc--EEEEEee--CCEEEEEeCCCcEEEEEC----------------------------------------------
Q 014934          248 GHRLR--VGALAWS--SSLLSSGSRDKSILQRDI----------------------------------------------  277 (415)
Q Consensus       248 ~h~~~--V~~l~~~--~~~l~sgs~dg~I~iwd~----------------------------------------------  277 (415)
                      .+...  +....+.  +..+++++.|+.|++||+                                              
T Consensus        92 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~  171 (355)
T d1nexb2          92 GHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVSGHG  171 (355)
T ss_dssp             CCSSCEEEEEEEEETTEEEEEEEETTSEEEEEECCC-----------CCCEEESCTTTCTTEEEEEECCSSCEEEEEEET
T ss_pred             cccccccccccccccccceeeeecCCCcEEEEEccCCceeccccccceeccceeccccccceeeeeeecccccccccccc
Confidence            32222  2222222  234555555555555554                                              


Q ss_pred             -----------------CCCCccEEEeccccCCeEEEEEeCCCCEEEEEeCCCcEEEEECCCCceeEEeccCCCcEEEEE
Q 014934          278 -----------------RAQEDFVSKLSGHKSEVCGLKWSYDNRELASGGNDNRLFVWNQHSTQPVLKYCEHTAAVKAIA  340 (415)
Q Consensus       278 -----------------~~~~~~~~~~~~h~~~V~~l~~spdg~~lasg~~dg~I~iwd~~~~~~~~~~~~h~~~V~~l~  340 (415)
                                       +... .+....++...+.++.|+|++.++++++.|+.|++||+.++..+..+.+|...|.+++
T Consensus       172 ~~~~~~~~d~~i~~~d~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~  250 (355)
T d1nexb2         172 NIVVSGSYDNTLIVWDVAQMK-CLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYTLQGHTALVGLLR  250 (355)
T ss_dssp             TEEEEEETTSCEEEEETTTTE-EEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTCCEEEEECCCSSCCCEEE
T ss_pred             ceeeeecccceeeeeeccccc-ceeeeeccccccccccccccceeeecccccceEEeeeccccccccccccccccccccc
Confidence                             4333 3444556778889999999999999999999999999999999999999999999999


Q ss_pred             EcCCCCcEEEEEcCCCCCeEEEEECCCCcEEEEeeCCCCEEEEEECCCCCeEEEEEecCCCcEEEEECCCCccc
Q 014934          341 WSPHLHGLLASGGGTADRCIRFWNTTTNTHLSCMDTGSQVCNLVWSKNVNELVSTHGYSQNQIIVWRYPTMSKV  414 (415)
Q Consensus       341 ~sp~~~~llasggg~~d~~I~iwd~~t~~~~~~~~~~~~V~~l~~s~~~~~l~s~~g~~dg~I~vw~~~s~~~l  414 (415)
                      |++.   +|++++  .|+.|++||+.++.......+........++++++.|++  | .||.|+|||+++++.+
T Consensus       251 ~~~~---~l~~~~--~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--g-~d~~i~vwd~~tg~~~  316 (355)
T d1nexb2         251 LSDK---FLVSAA--ADGSIRGWDANDYSRKFSYHHTNLSAITTFYVSDNILVS--G-SENQFNIYNLRSGKLV  316 (355)
T ss_dssp             ECSS---EEEEEC--TTSEEEEEETTTCCEEEEEECTTCCCCCEEEECSSEEEE--E-ETTEEEEEETTTCCBC
T ss_pred             cccc---eeeeee--cccccccccccccceecccccCCceEEEEEcCCCCEEEE--E-eCCEEEEEECCCCCEE
Confidence            9863   777776  899999999999887766655444444566777776665  4 5899999999987754


No 18 
>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]}
Probab=99.96  E-value=8.9e-28  Score=222.59  Aligned_cols=210  Identities=18%  Similarity=0.246  Sum_probs=171.9

Q ss_pred             CCeEEeEecCCCCCeEEEEEcCCCCeEEEEECCCcEEEEECCCCeeeEEec-CCCccEEEEEeeC-CEEEEEeCCCcEEE
Q 014934          197 SKVTKLCDLGIDDSVCSVGWANRNTHLAVGTSHGKVQIWDASRCKRVRTME-GHRLRVGALAWSS-SLLSSGSRDKSILQ  274 (415)
Q Consensus       197 ~~~~~~~~~~~~~~V~~v~~sp~g~~la~g~~dg~V~iwd~~~~~~~~~l~-~h~~~V~~l~~~~-~~l~sgs~dg~I~i  274 (415)
                      |++.+++. +|.+.|++++|+|+|++||+|+.||.|++||+.+++.+..+. +|...|.+++|++ ..+++++.|+.+++
T Consensus         2 g~~~~~~~-GH~~~V~~l~~s~dg~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~h~~~v~~v~~~~~g~~~~~~~d~~v~~   80 (299)
T d1nr0a2           2 GSIDQVRY-GHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKTTSKGDLFTVSWDDHLKV   80 (299)
T ss_dssp             TEEEEEEC-CCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEECSSCSCSSCEEEEEECTTSCEEEEETTTEEEE
T ss_pred             CccceEcC-CCCCCcEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEcCCCCCcEEEEEeeccceeecccceeeEEE
Confidence            45566665 999999999999999999999999999999999999888874 6899999999984 46778889999999


Q ss_pred             EECCCCCc-------------c-------------------EEE-------eccccCCeEEEEEeCCCCEEEEEeCCCcE
Q 014934          275 RDIRAQED-------------F-------------------VSK-------LSGHKSEVCGLKWSYDNRELASGGNDNRL  315 (415)
Q Consensus       275 wd~~~~~~-------------~-------------------~~~-------~~~h~~~V~~l~~spdg~~lasg~~dg~I  315 (415)
                      |+......             .                   +..       .......+.+++|+|++++|++|+.|+.|
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i  160 (299)
T d1nr0a2          81 VPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIYSHGKLTEVPISYNSSCVALSNDKQFVAVGGQDSKV  160 (299)
T ss_dssp             ECSSSSSSCTTSCCEEECSSCEEEEEECTTSSCEEEEESSEEEEEETTEEEEEECSSCEEEEEECTTSCEEEEEETTSEE
T ss_pred             eccCCccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            99754210             0                   000       00123457889999999999999999999


Q ss_pred             EEEECCCCceeE-EeccCCCcEEEEEEcCCCCcEEEEEcCCCCCeEEEEECCCCcEEEEee----CCCCEEEEEECCCCC
Q 014934          316 FVWNQHSTQPVL-KYCEHTAAVKAIAWSPHLHGLLASGGGTADRCIRFWNTTTNTHLSCMD----TGSQVCNLVWSKNVN  390 (415)
Q Consensus       316 ~iwd~~~~~~~~-~~~~h~~~V~~l~~sp~~~~llasggg~~d~~I~iwd~~t~~~~~~~~----~~~~V~~l~~s~~~~  390 (415)
                      ++||+++++... ....|...|.+++|+|++. +|++++  .|+.|++||+.++..+....    |...|.+++|+|+++
T Consensus       161 ~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~~~~--~d~~i~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~  237 (299)
T d1nr0a2         161 HVYKLSGASVSEVKTIVHPAEITSVAFSNNGA-FLVATD--QSRKVIPYSVANNFELAHTNSWTFHTAKVACVSWSPDNV  237 (299)
T ss_dssp             EEEEEETTEEEEEEEEECSSCEEEEEECTTSS-EEEEEE--TTSCEEEEEGGGTTEESCCCCCCCCSSCEEEEEECTTSS
T ss_pred             cccccccccccccccccccccccccccccccc-cccccc--ccccccccccccccccccccccccccccccccccccccc
Confidence            999998876543 3447999999999999987 566665  79999999999887665443    567899999999999


Q ss_pred             eEEEEEecCCCcEEEEECCCCc
Q 014934          391 ELVSTHGYSQNQIIVWRYPTMS  412 (415)
Q Consensus       391 ~l~s~~g~~dg~I~vw~~~s~~  412 (415)
                      +|++  |+.||.|++||+.+..
T Consensus       238 ~l~s--gs~dg~i~iwd~~~~~  257 (299)
T d1nr0a2         238 RLAT--GSLDNSVIVWNMNKPS  257 (299)
T ss_dssp             EEEE--EETTSCEEEEETTCTT
T ss_pred             ceEE--EcCCCEEEEEECCCCC
Confidence            9998  7889999999998764


No 19 
>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.96  E-value=1.2e-26  Score=211.54  Aligned_cols=225  Identities=21%  Similarity=0.413  Sum_probs=182.6

Q ss_pred             cceeEeecCCCcEEEEEcCCeEEEEECCCCCeEEeEecCCCCCeEEEEEcCCCCeEEEEECCCcEEEEECCCCeee----
Q 014934          168 FYLNLVDWSSHNVLAVGLGNCVYLWNACSSKVTKLCDLGIDDSVCSVGWANRNTHLAVGTSHGKVQIWDASRCKRV----  243 (415)
Q Consensus       168 ~~i~~l~ws~~~~la~~~d~~V~iwd~~~~~~~~~~~~~~~~~V~~v~~sp~g~~la~g~~dg~V~iwd~~~~~~~----  243 (415)
                      ..|.|++|+.+.+++++.|+.|+|||+.++++...+. +|.+.|++++|  ++++|++|+.||.|++|++..+...    
T Consensus        16 ~~V~c~~~d~~~l~sgs~Dg~i~vWd~~~~~~~~~l~-~H~~~V~~v~~--~~~~l~s~s~D~~i~~~~~~~~~~~~~~~   92 (293)
T d1p22a2          16 KGVYCLQYDDQKIVSGLRDNTIKIWDKNTLECKRILT-GHTGSVLCLQY--DERVIITGSSDSTVRVWDVNTGEMLNTLI   92 (293)
T ss_dssp             CCEEEEECCSSEEEEEESSSCEEEEESSSCCEEEEEC-CCSSCEEEEEC--CSSEEEEEETTSCEEEEESSSCCEEEEEC
T ss_pred             CCEEEEEEcCCEEEEEeCCCeEEEEECCCCcEEEEEe-cCCCCEeeeec--ccceeeccccccccccccccccccccccc
Confidence            3588999875444444578999999999999988886 89999999987  6789999999999999997543221    


Q ss_pred             ---------------------------------------EEecCCCccEEEEEeeCCEEEEEeCCCcEEEEECCCCCccE
Q 014934          244 ---------------------------------------RTMEGHRLRVGALAWSSSLLSSGSRDKSILQRDIRAQEDFV  284 (415)
Q Consensus       244 ---------------------------------------~~l~~h~~~V~~l~~~~~~l~sgs~dg~I~iwd~~~~~~~~  284 (415)
                                                             ..+..|...|..+.+.+..+++++.|+.|++||+++.+ .+
T Consensus        93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~d~~i~~~d~~~~~-~~  171 (293)
T d1p22a2          93 HHCEAVLHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCE-FV  171 (293)
T ss_dssp             CCCSCEEEEECCTTEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEEETTEEEEEETTSEEEEEETTTCC-EE
T ss_pred             ccccccccccccccceeecccccceeEeeccccccccccccccccccccccceecccccccccCCCceeeecCCCCc-EE
Confidence                                                   12234666777788888899999999999999999887 57


Q ss_pred             EEeccccCCeEEEEEeCCCCEEEEEeCCCcEEEEECCCCceeEEeccCCCcEEEEEEcCCCCcEEEEEcCCCCCeEEEEE
Q 014934          285 SKLSGHKSEVCGLKWSYDNRELASGGNDNRLFVWNQHSTQPVLKYCEHTAAVKAIAWSPHLHGLLASGGGTADRCIRFWN  364 (415)
Q Consensus       285 ~~~~~h~~~V~~l~~spdg~~lasg~~dg~I~iwd~~~~~~~~~~~~h~~~V~~l~~sp~~~~llasggg~~d~~I~iwd  364 (415)
                      ..+.+|...|..+.++  +.+|++++.||.|++||+++.+.+..+.+|...+..+.  +++. .|++++  .|+.|++||
T Consensus       172 ~~~~~~~~~v~~~~~~--~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~--~~~~-~l~sg~--~dg~i~iwd  244 (293)
T d1p22a2         172 RTLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIR--FDNK-RIVSGA--YDGKIKVWD  244 (293)
T ss_dssp             EEEECCSSCEEEEEEE--TTEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEE--CCSS-EEEEEE--TTSCEEEEE
T ss_pred             EEEcccccccccccCC--CCeEEEecCCCEEEEEecccceeeeeecccceeeeecc--ccce-EEEEEc--CCCEEEEEE
Confidence            7888898999888776  56899999999999999999999999999998887654  4444 677776  899999999


Q ss_pred             CCC---------CcEEEEee-CCCCEEEEEECCCCCeEEEEEecCCCcEEEEE
Q 014934          365 TTT---------NTHLSCMD-TGSQVCNLVWSKNVNELVSTHGYSQNQIIVWR  407 (415)
Q Consensus       365 ~~t---------~~~~~~~~-~~~~V~~l~~s~~~~~l~s~~g~~dg~I~vw~  407 (415)
                      +.+         ..++..+. |...|++++|+  +.+|++  |+.||+|+|||
T Consensus       245 ~~~~~~~~~~~~~~~~~~~~~H~~~V~~v~~d--~~~l~s--~s~Dg~i~iWD  293 (293)
T d1p22a2         245 LVAALDPRAPAGTLCLRTLVEHSGRVFRLQFD--EFQIVS--SSHDDTILIWD  293 (293)
T ss_dssp             HHHHTSTTSCTTTTEEEEECCCSSCCCCEEEC--SSCEEE--CCSSSEEEEEC
T ss_pred             CCCCccccccCCceeeEEecCCCCCEEEEEEc--CCEEEE--EecCCEEEEeC
Confidence            753         23455554 67789999995  567888  78999999997


No 20 
>d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.95  E-value=1.3e-26  Score=224.39  Aligned_cols=241  Identities=14%  Similarity=0.200  Sum_probs=177.5

Q ss_pred             cceeEeecCCCcEEEEEcCCeEEEEECCCCCeE-----EeEecCCCCCeEEEEE------cC-CCCeEEEEECCCcEEEE
Q 014934          168 FYLNLVDWSSHNVLAVGLGNCVYLWNACSSKVT-----KLCDLGIDDSVCSVGW------AN-RNTHLAVGTSHGKVQIW  235 (415)
Q Consensus       168 ~~i~~l~ws~~~~la~~~d~~V~iwd~~~~~~~-----~~~~~~~~~~V~~v~~------sp-~g~~la~g~~dg~V~iw  235 (415)
                      -.|.+++++++.++.++.|+.|+|||..+.+..     ......|...+..+..      .. ++.++++++.||.|++|
T Consensus        15 ~~I~~v~~~~~~l~S~S~D~~iriWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~dg~v~~w   94 (393)
T d1sq9a_          15 ADIFSVSACNSFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLVATTSFSGDLLFY   94 (393)
T ss_dssp             SCEEEEEECSSEEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEEEEEEETTSCEEEE
T ss_pred             CccEEEEEeCCEEEEEECCCeEEEEECCCCCCCcccceeEeeeeccCCceEeeeEeeeccCCCCCcEEEEEeCCCcEEEE
Confidence            357888888877777778999999997665421     1111134443333222      11 34578899999999999


Q ss_pred             ECCCCeee-----EEe-----cCCCccEEEEEee-------CCEEEEEeCCCcEEEEECCCCCc----------------
Q 014934          236 DASRCKRV-----RTM-----EGHRLRVGALAWS-------SSLLSSGSRDKSILQRDIRAQED----------------  282 (415)
Q Consensus       236 d~~~~~~~-----~~l-----~~h~~~V~~l~~~-------~~~l~sgs~dg~I~iwd~~~~~~----------------  282 (415)
                      ++......     ...     ..+...+..++|.       ..++++++.||.|.+||+.....                
T Consensus        95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~  174 (393)
T d1sq9a_          95 RITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQ  174 (393)
T ss_dssp             EEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHHHTTTCCCCEEEEE
T ss_pred             EccCCCceeeeeccccceeeeccCCCceEEEEEecCCCcccccEEEEEcCCCcEEEEEeecCCcccceeeeeeccceecc
Confidence            97543211     111     1244567777776       25789999999999999853220                


Q ss_pred             -cEEEeccccCCeEEEEEeCCCCEEEEEeCCCcEEEEECCCCceeEEe------ccCCCcEEEEEEcCCCCcEEEEEcCC
Q 014934          283 -FVSKLSGHKSEVCGLKWSYDNRELASGGNDNRLFVWNQHSTQPVLKY------CEHTAAVKAIAWSPHLHGLLASGGGT  355 (415)
Q Consensus       283 -~~~~~~~h~~~V~~l~~spdg~~lasg~~dg~I~iwd~~~~~~~~~~------~~h~~~V~~l~~sp~~~~llasggg~  355 (415)
                       .......+...+.+++|+|++ +||+|+.|+.|+|||+.+++++..+      .+|...|.+|+|+|+++ +|++|+  
T Consensus       175 ~~~~~~~~~~~~~~~v~~s~dg-~lasgs~Dg~i~iwd~~~~~~~~~~~~~~~l~~h~~~V~~l~~spdg~-~l~sgs--  250 (393)
T d1sq9a_         175 GTVESPMTPSQFATSVDISERG-LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGS-LLAIAH--  250 (393)
T ss_dssp             EEECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSSTT-EEEEEE--
T ss_pred             cceecccCCCCcEEEEEECCCC-EEEEEeCCCcEEEEeecccccccccccccccccccceEEEcccccccc-eeeeec--
Confidence             011122445668999999997 8999999999999999998877654      46899999999999997 677776  


Q ss_pred             CCC---eEEEEECCCCcEEEEee--------------CCCCEEEEEECCCCCeEEEEEecCCCcEEEEECCCCccc
Q 014934          356 ADR---CIRFWNTTTNTHLSCMD--------------TGSQVCNLVWSKNVNELVSTHGYSQNQIIVWRYPTMSKV  414 (415)
Q Consensus       356 ~d~---~I~iwd~~t~~~~~~~~--------------~~~~V~~l~~s~~~~~l~s~~g~~dg~I~vw~~~s~~~l  414 (415)
                      .|+   .|++||+.+++++..+.              |...|++++|+|++++|++  |+.|++|+|||+.+++.+
T Consensus       251 ~D~t~~~i~lwd~~~g~~~~~l~~~~~~~~~~~~~~gH~~~V~~l~fspd~~~l~S--~s~D~~v~vWd~~~g~~~  324 (393)
T d1sq9a_         251 DSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCS--AGWDGKLRFWDVKTKERI  324 (393)
T ss_dssp             EETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEE--EETTSEEEEEETTTTEEE
T ss_pred             CCCCcceeeecccccceeeeeeccccccccceeeeecccCceeeeccCCCCCeeEE--ECCCCEEEEEECCCCCEE
Confidence            565   59999999999888773              5678999999999999998  789999999999987643


No 21 
>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.95  E-value=2.8e-26  Score=211.32  Aligned_cols=226  Identities=14%  Similarity=0.227  Sum_probs=173.2

Q ss_pred             cceeEeecCCCcEEEEEcCCeEEEEECCCCCeEEeEecCCCCCeEEEEEcCCCCeEEEEECCCcEEEEECCCC-------
Q 014934          168 FYLNLVDWSSHNVLAVGLGNCVYLWNACSSKVTKLCDLGIDDSVCSVGWANRNTHLAVGTSHGKVQIWDASRC-------  240 (415)
Q Consensus       168 ~~i~~l~ws~~~~la~~~d~~V~iwd~~~~~~~~~~~~~~~~~V~~v~~sp~g~~la~g~~dg~V~iwd~~~~-------  240 (415)
                      -.|++++|++  +++++.|+.|++||..++.      ..|...|.++.+++++ .+++++.|++|++|++...       
T Consensus        14 ~~I~~l~~s~--l~sgs~Dg~v~~Wd~~~~~------~~h~~~V~~~~~~~~~-~~~s~s~D~~v~~w~~~~~~~~~~~~   84 (287)
T d1pgua2          14 KGITALTVNP--LISGSYDGRIMEWSSSSMH------QDHSNLIVSLDNSKAQ-EYSSISWDDTLKVNGITKHEFGSQPK   84 (287)
T ss_dssp             SCEEEEETTT--TEEEETTSCEEETTTTEEE------CCCCSCEEEEECCSTT-CCEEEETTTEEEETTEEEEECSSCEE
T ss_pred             CceEEEEECc--EEEEeCCCeEEEEECCCCC------CCCCCCEEEEEecCCC-eEEEEeecccccccccccccccccee
Confidence            4689999987  6666689999999986532      2678889999988654 5678888888888875421       


Q ss_pred             ---------------------------eeeEEecCCCccEEEEEeeCCEEEEEeCCC-cEEEEECCCCCccEEEeccccC
Q 014934          241 ---------------------------KRVRTMEGHRLRVGALAWSSSLLSSGSRDK-SILQRDIRAQEDFVSKLSGHKS  292 (415)
Q Consensus       241 ---------------------------~~~~~l~~h~~~V~~l~~~~~~l~sgs~dg-~I~iwd~~~~~~~~~~~~~h~~  292 (415)
                                                 +.+..+. +...+.++..++..+++++.++ .|++|++............|..
T Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~  163 (287)
T d1pgua2          85 VASANNDGFTAVLTNDDDLLILQSFTGDIIKSVR-LNSPGSAVSLSQNYVAVGLEEGNTIQVFKLSDLEVSFDLKTPLRA  163 (287)
T ss_dssp             EEEECSSSEEEEEETTSEEEEEETTTCCEEEEEE-CSSCEEEEEECSSEEEEEETTTSCEEEEETTEEEEEEECSSCCSS
T ss_pred             eeeeccCCceEEEeecccceeeeccceeeeeecc-ccceeeeeeccCcceeeeccccceeeeeeccccceeeeeeeccCC
Confidence                                       1122221 2234555666677777777765 7999999766533333446788


Q ss_pred             CeEEEEEeCCCCEEEEEeCCCcEEEEECCCCceeE-EeccCCCcEEEEEEcCCC---------CcEEEEEcCCCCCeEEE
Q 014934          293 EVCGLKWSYDNRELASGGNDNRLFVWNQHSTQPVL-KYCEHTAAVKAIAWSPHL---------HGLLASGGGTADRCIRF  362 (415)
Q Consensus       293 ~V~~l~~spdg~~lasg~~dg~I~iwd~~~~~~~~-~~~~h~~~V~~l~~sp~~---------~~llasggg~~d~~I~i  362 (415)
                      .|.+++|+|++.+|++|+.||.|++||+.+++... .+..|...|.+++|+|.+         ..++++|+  .|+.|++
T Consensus       164 ~v~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~l~sgs--~D~~i~i  241 (287)
T d1pgua2         164 KPSYISISPSETYIAAGDVMGKILLYDLQSREVKTSRWAFRTSKINAISWKPAEKGANEEEIEEDLVATGS--LDTNIFI  241 (287)
T ss_dssp             CEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEECCSCCCSSCEEEEEECCCC------CCSCCEEEEEE--TTSCEEE
T ss_pred             ceeEEEeccCccccccccccccccceeecccccccccccccccccceeeecccccccccccCCCCeeEeec--CCCeEEE
Confidence            99999999999999999999999999999887654 466899999999999865         24788887  8999999


Q ss_pred             EECCC-CcEEEEee-CCCCEEEEEECCCCCeEEEEEecCCCcEEEEEC
Q 014934          363 WNTTT-NTHLSCMD-TGSQVCNLVWSKNVNELVSTHGYSQNQIIVWRY  408 (415)
Q Consensus       363 wd~~t-~~~~~~~~-~~~~V~~l~~s~~~~~l~s~~g~~dg~I~vw~~  408 (415)
                      ||+.+ ++.+..+. |...|++++|++++ .|++  ++.|+.|++|++
T Consensus       242 w~~~~~~~~~~~~~~h~~~V~~v~~~~~~-~l~s--~g~D~~v~iW~i  286 (287)
T d1pgua2         242 YSVKRPMKIIKALNAHKDGVNNLLWETPS-TLVS--SGADACIKRWNV  286 (287)
T ss_dssp             EESSCTTCCEEETTSSTTCEEEEEEEETT-EEEE--EETTSCEEEEEE
T ss_pred             EECCCCCeEEEEeCCCCCCeEEEEECCCC-EEEE--EECCCeEEEEEE
Confidence            99977 44555443 67889999999986 4666  568999999986


No 22 
>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.95  E-value=8.3e-26  Score=210.53  Aligned_cols=210  Identities=22%  Similarity=0.397  Sum_probs=169.4

Q ss_pred             EECCCCCeEEeEecCCCCCeEEEEEcCCCCeEEEEECCCcEEEEECCCCeeeEEecCCCccEEEEEeeCCEEEEEeCCCc
Q 014934          192 WNACSSKVTKLCDLGIDDSVCSVGWANRNTHLAVGTSHGKVQIWDASRCKRVRTMEGHRLRVGALAWSSSLLSSGSRDKS  271 (415)
Q Consensus       192 wd~~~~~~~~~~~~~~~~~V~~v~~sp~g~~la~g~~dg~V~iwd~~~~~~~~~l~~h~~~V~~l~~~~~~l~sgs~dg~  271 (415)
                      |+....+...++. +|.+.|.+ +++++|++||+|+.||+|+|||+.+++++.++.+|...|.+++|++++|++|+.|+.
T Consensus         1 W~~~~~~~~~~l~-GH~~~V~s-~~~~~g~~l~sgs~Dg~i~vWd~~~~~~~~~~~~h~~~V~~v~~~~~~l~s~s~D~~   78 (342)
T d2ovrb2           1 WRRGELKSPKVLK-GHDDHVIT-CLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDNIIISGSTDRT   78 (342)
T ss_dssp             HHHSCCCCCEEEE-CSTTSCEE-EEEEETTEEEEEETTSCEEEEETTTCCEEEECCCCSSCEEEEEEETTEEEEEETTSC
T ss_pred             CCCCCCCcCEEEC-CcCCceEE-EEEECCCEEEEEeCCCeEEEEECCCCCEEEEEeCCCCCEEEEEeCCCccccceeccc
Confidence            4444555666676 89988865 466789999999999999999999999999999999999999999999999999999


Q ss_pred             EEEEECCCCCc---------------------------------------------------------------------
Q 014934          272 ILQRDIRAQED---------------------------------------------------------------------  282 (415)
Q Consensus       272 I~iwd~~~~~~---------------------------------------------------------------------  282 (415)
                      +++|+......                                                                     
T Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~  158 (342)
T d2ovrb2          79 LKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFM  158 (342)
T ss_dssp             EEEEETTTTEEEEEECCCSSCEEEEEEETTEEEEEETTSEEEEEESSSCCEEEEEECCSSCEEEEEECSSCEEEEETTSC
T ss_pred             ccccccccccceecccccceeEeeeecccccccccccceeEEEeecccccceeeeecccccceeeccccceeeeecCCCe
Confidence            99998754220                                                                     


Q ss_pred             ----------cEEEeccccCCeEEEEEeCCCCEEEEEeCCCcEEEEECCCCceeEEeccCCCcEEEEEEcCCCCcEEEEE
Q 014934          283 ----------FVSKLSGHKSEVCGLKWSYDNRELASGGNDNRLFVWNQHSTQPVLKYCEHTAAVKAIAWSPHLHGLLASG  352 (415)
Q Consensus       283 ----------~~~~~~~h~~~V~~l~~spdg~~lasg~~dg~I~iwd~~~~~~~~~~~~h~~~V~~l~~sp~~~~llasg  352 (415)
                                .+..+.+|...+  ..+++++.+|++|+.||.|++||++.++++..+..|...|.+++++++   +|+++
T Consensus       159 i~~~d~~~~~~~~~~~~~~~~~--~~~~~~~~~l~s~~~dg~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~---~l~s~  233 (342)
T d2ovrb2         159 VKVWDPETETCLHTLQGHTNRV--YSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDN---ILVSG  233 (342)
T ss_dssp             EEEEEGGGTEEEEEECCCSSCE--EEEEECSSEEEEEETTSCEEEEETTTCCEEEEECCCCSCEEEEEEETT---EEEEE
T ss_pred             EEEeecccceeeEEEcCccccc--ccccCCCCEEEEEeCCCeEEEeecccceeeeEecccccceeEEecCCC---EEEEE
Confidence                      011122333333  344557889999999999999999999999999999999999988864   77777


Q ss_pred             cCCCCCeEEEEECCCCcEEEEee----CCCCEEEEEECCCCCeEEEEEecCCCcEEEEECCCCccc
Q 014934          353 GGTADRCIRFWNTTTNTHLSCMD----TGSQVCNLVWSKNVNELVSTHGYSQNQIIVWRYPTMSKV  414 (415)
Q Consensus       353 gg~~d~~I~iwd~~t~~~~~~~~----~~~~V~~l~~s~~~~~l~s~~g~~dg~I~vw~~~s~~~l  414 (415)
                      +  .|+.|++||+...+....+.    +...+.++.++  ++++++  |+.||.|+|||+.+++.+
T Consensus       234 s--~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~s--~s~Dg~i~iwd~~tg~~i  293 (342)
T d2ovrb2         234 N--ADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFN--KNFVIT--SSDDGTVKLWDLKTGEFI  293 (342)
T ss_dssp             E--TTSCEEEEETTTCCEEEEECSTTSCSSCEEEEEEC--SSEEEE--EETTSEEEEEETTTCCEE
T ss_pred             c--CCCEEEEEecccccccccccccceeeeceeecccC--CCeeEE--EcCCCEEEEEECCCCCEE
Confidence            7  89999999999998887775    34556667665  467877  778999999999987653


No 23 
>d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}
Probab=99.94  E-value=6.5e-25  Score=207.22  Aligned_cols=185  Identities=12%  Similarity=0.040  Sum_probs=151.0

Q ss_pred             EeecCC--CcEEEEEcCCeEEEEECCCCCeEEeEecCCCCCeEEEEEcCCCCeEEEEECCC--cEEEEECCCCeeeEEec
Q 014934          172 LVDWSS--HNVLAVGLGNCVYLWNACSSKVTKLCDLGIDDSVCSVGWANRNTHLAVGTSHG--KVQIWDASRCKRVRTME  247 (415)
Q Consensus       172 ~l~ws~--~~~la~~~d~~V~iwd~~~~~~~~~~~~~~~~~V~~v~~sp~g~~la~g~~dg--~V~iwd~~~~~~~~~l~  247 (415)
                      .-+|||  ++++|++.++.|++|+..++...++   .|...|++++|+|||++|++++.+.  .|++||..+++. ..+.
T Consensus         7 ~~~fSP~dG~~~a~~~~g~v~v~d~~~~~~~~~---~~~~~v~~~~~spDg~~l~~~~~~~g~~v~v~d~~~~~~-~~~~   82 (360)
T d1k32a3           7 AEDFSPLDGDLIAFVSRGQAFIQDVSGTYVLKV---PEPLRIRYVRRGGDTKVAFIHGTREGDFLGIYDYRTGKA-EKFE   82 (360)
T ss_dssp             EEEEEECGGGCEEEEETTEEEEECTTSSBEEEC---SCCSCEEEEEECSSSEEEEEEEETTEEEEEEEETTTCCE-EECC
T ss_pred             cccccCCCCCEEEEEECCeEEEEECCCCcEEEc---cCCCCEEEEEECCCCCEEEEEEcCCCCEEEEEECCCCcE-EEee
Confidence            357887  7899999999999999998877653   6889999999999999998876553  799999988764 4577


Q ss_pred             CCCccEEEEEee--CCEEEEEeCCCcEEEEECCCCCccEEEeccccCCeEEEEEeCCCCEEEEEe----------CCCcE
Q 014934          248 GHRLRVGALAWS--SSLLSSGSRDKSILQRDIRAQEDFVSKLSGHKSEVCGLKWSYDNRELASGG----------NDNRL  315 (415)
Q Consensus       248 ~h~~~V~~l~~~--~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~spdg~~lasg~----------~dg~I  315 (415)
                      .|...|.+++|+  +++|++++.++.+++|++.... ....+..|...+.+++|+|||++||.+.          .++.+
T Consensus        83 ~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~spdg~~la~~~~~~~~~~~~~~~~~~  161 (360)
T d1k32a3          83 ENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGK-PTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAI  161 (360)
T ss_dssp             CCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCC-EEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEE
T ss_pred             CCCceEEeeeecccccccceeccccccccccccccc-eeeeeecccccccchhhccceeeeeeeccccccceeeccccce
Confidence            899999999998  5799999999999999998887 5677788999999999999999998654          34569


Q ss_pred             EEEECCCCceeEEeccCCCcEEEEEEcCCCCcEEEEEcCCCCCeEEEEEC
Q 014934          316 FVWNQHSTQPVLKYCEHTAAVKAIAWSPHLHGLLASGGGTADRCIRFWNT  365 (415)
Q Consensus       316 ~iwd~~~~~~~~~~~~h~~~V~~l~~sp~~~~llasggg~~d~~I~iwd~  365 (415)
                      ++||+.+++.. .+..|...+..++|+|+|+.|+. ++  .++.+++|+.
T Consensus       162 ~v~d~~~~~~~-~~~~~~~~~~~~~~spdg~~l~~-~s--~~~~~~~~d~  207 (360)
T d1k32a3         162 HVYDMEGRKIF-AATTENSHDYAPAFDADSKNLYY-LS--YRSLDPSPDR  207 (360)
T ss_dssp             EEEETTTTEEE-ECSCSSSBEEEEEECTTSCEEEE-EE--SCCCCCEECS
T ss_pred             eeeccccCcee-eecccccccccccccCCCCEEEE-Ee--CCCceEcccc
Confidence            99999887654 44467778888999999885544 33  4566666653


No 24 
>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.94  E-value=6.8e-25  Score=203.66  Aligned_cols=242  Identities=15%  Similarity=0.165  Sum_probs=180.7

Q ss_pred             ceeEeecCC-CcEEEEE-cCCeEEEEECCCCCeEE--eEecCCCCCeEEEEEcCC-CCeEEEEECCCcEEEEECCCCeee
Q 014934          169 YLNLVDWSS-HNVLAVG-LGNCVYLWNACSSKVTK--LCDLGIDDSVCSVGWANR-NTHLAVGTSHGKVQIWDASRCKRV  243 (415)
Q Consensus       169 ~i~~l~ws~-~~~la~~-~d~~V~iwd~~~~~~~~--~~~~~~~~~V~~v~~sp~-g~~la~g~~dg~V~iwd~~~~~~~  243 (415)
                      .|++|+|+| +++||++ .|++|+|||+.++....  ....+|...|++++|+|+ +.+|++|+.||.|++|++......
T Consensus        13 ~I~~l~fsp~~~~L~s~s~Dg~v~iwd~~~~~~~~~~~~~~~h~~~V~~v~f~~~~~~~l~sg~~d~~v~~w~~~~~~~~   92 (342)
T d1yfqa_          13 YISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDLIGSPSF   92 (342)
T ss_dssp             CEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEEECSSSSSSE
T ss_pred             CEEEEEEeCCCCEEEEEECCCeEEEEEccCCCcceEEEEecCCCCCEEEEEEeCCCCCEEEEcccccceeeeeccccccc
Confidence            699999999 7777777 58999999987654322  222368999999999986 468999999999999999888777


Q ss_pred             EEecCCCccEEE-EEe--eCCEEEEEeCCCcEEEEECCCCCccE---EEeccc--cCCeEEEEEeCCCCEEEEEeCCCcE
Q 014934          244 RTMEGHRLRVGA-LAW--SSSLLSSGSRDKSILQRDIRAQEDFV---SKLSGH--KSEVCGLKWSYDNRELASGGNDNRL  315 (415)
Q Consensus       244 ~~l~~h~~~V~~-l~~--~~~~l~sgs~dg~I~iwd~~~~~~~~---~~~~~h--~~~V~~l~~spdg~~lasg~~dg~I  315 (415)
                      .....+...+.. ..+  ....+++++.|+.+++||++......   .....+  ......+.+.+++..+++++.|+.|
T Consensus        93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i  172 (342)
T d1yfqa_          93 QALTNNEANLGICRICKYGDDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSRLIVGMNNSQV  172 (342)
T ss_dssp             EECBSCCCCSCEEEEEEETTTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSSSCCCEEEEEECSSEEEEEESTTEE
T ss_pred             ccccccccccccccccccccccccccccccccceeeccccccceeeecccccccccceeeeeeeeccCCceeeecCCCcE
Confidence            666554433322 222  36899999999999999987654221   222222  2345567778899999999999999


Q ss_pred             EEEECCCCcee---EEeccCCCcEEEEEEcCCCCcEEEEEcCCCCCeEEEEECCCCcE---------EEEe-------eC
Q 014934          316 FVWNQHSTQPV---LKYCEHTAAVKAIAWSPHLHGLLASGGGTADRCIRFWNTTTNTH---------LSCM-------DT  376 (415)
Q Consensus       316 ~iwd~~~~~~~---~~~~~h~~~V~~l~~sp~~~~llasggg~~d~~I~iwd~~t~~~---------~~~~-------~~  376 (415)
                      ++||+...+..   .....+...+.+..+.+.....+++++  .|+.+.+|+......         ....       .+
T Consensus       173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s--~dg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (342)
T d1yfqa_         173 QWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSS--IDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNL  250 (342)
T ss_dssp             EEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEE--TTSEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSS
T ss_pred             EEEecccCcccceeeeecccccceeeeEeecCCCCEEEeec--CCCeEEEEEecCCcceeeccccceeeeeeeccCCCcc
Confidence            99999876433   233356667778888777666777776  899999999865321         1111       13


Q ss_pred             CCCEEEEEECCCCCeEEEEEecCCCcEEEEECCCCccc
Q 014934          377 GSQVCNLVWSKNVNELVSTHGYSQNQIIVWRYPTMSKV  414 (415)
Q Consensus       377 ~~~V~~l~~s~~~~~l~s~~g~~dg~I~vw~~~s~~~l  414 (415)
                      ...|.+++|+|++++|++  |+.||.|+|||+.+.+++
T Consensus       251 ~~~v~~l~~sp~~~~las--g~~Dg~v~vWD~~~~~~l  286 (342)
T d1yfqa_         251 AYPVNSIEFSPRHKFLYT--AGSDGIISCWNLQTRKKI  286 (342)
T ss_dssp             CCCEEEEEECTTTCCEEE--EETTSCEEEEETTTTEEE
T ss_pred             cccceeEEecCCccEEEE--ECCCCEEEEEECCCCcEE
Confidence            456899999999999999  789999999999987654


No 25 
>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.93  E-value=1.3e-24  Score=203.47  Aligned_cols=228  Identities=16%  Similarity=0.214  Sum_probs=167.3

Q ss_pred             cceeEeecCCCcEEEEE-cCCeEEEEECCCCCeEEeEecC-CCCCeEEEEEcCCCCeEEEEECCCcEEEEEC--------
Q 014934          168 FYLNLVDWSSHNVLAVG-LGNCVYLWNACSSKVTKLCDLG-IDDSVCSVGWANRNTHLAVGTSHGKVQIWDA--------  237 (415)
Q Consensus       168 ~~i~~l~ws~~~~la~~-~d~~V~iwd~~~~~~~~~~~~~-~~~~V~~v~~sp~g~~la~g~~dg~V~iwd~--------  237 (415)
                      -.|++++|+++++|+++ .|+.|++|+....+........ +...+..+.+.+++.++++|+.||.|++||+        
T Consensus        54 ~~V~~l~~s~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~iw~~~~~~~~~~  133 (355)
T d1nexb2          54 GGVWALKYAHGGILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPD  133 (355)
T ss_dssp             SCEEEEEEETTTEEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEEEEETTEEEEEEEETTSEEEEEECCC------
T ss_pred             CCEEEEEEcCCCEEEEEecccccccccccccccccccccccccccccccccccccceeeeecCCCcEEEEEccCCceecc
Confidence            46999999996666655 6899999999887665444321 1222334445555556666666666655554        


Q ss_pred             -------------------------------------------------------CCCeeeEEecCCCccEEEEEee--C
Q 014934          238 -------------------------------------------------------SRCKRVRTMEGHRLRVGALAWS--S  260 (415)
Q Consensus       238 -------------------------------------------------------~~~~~~~~l~~h~~~V~~l~~~--~  260 (415)
                                                                             .+++.+....++...+.++.|+  +
T Consensus       134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~  213 (355)
T d1nexb2         134 HGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVSGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHER  213 (355)
T ss_dssp             -----CCCEEESCTTTCTTEEEEEECCSSCEEEEEEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTT
T ss_pred             ccccceeccceeccccccceeeeeeeccccccccccccceeeeecccceeeeeecccccceeeeeccccccccccccccc
Confidence                                                                   4444444555666777778887  5


Q ss_pred             CEEEEEeCCCcEEEEECCCCCccEEEeccccCCeEEEEEeCCCCEEEEEeCCCcEEEEECCCCceeEEeccCCCcEEEEE
Q 014934          261 SLLSSGSRDKSILQRDIRAQEDFVSKLSGHKSEVCGLKWSYDNRELASGGNDNRLFVWNQHSTQPVLKYCEHTAAVKAIA  340 (415)
Q Consensus       261 ~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~spdg~~lasg~~dg~I~iwd~~~~~~~~~~~~h~~~V~~l~  340 (415)
                      ..+++++.|+.|++||++++. .+..+.+|...|.+++|+  +++|++|+.||.|++||+++.....  ..|...+.+++
T Consensus       214 ~~~~~~~~d~~i~i~d~~~~~-~~~~~~~h~~~v~~~~~~--~~~l~~~~~dg~i~iwd~~~~~~~~--~~~~~~~~~~~  288 (355)
T d1nexb2         214 KRCISASMDTTIRIWDLENGE-LMYTLQGHTALVGLLRLS--DKFLVSAAADGSIRGWDANDYSRKF--SYHHTNLSAIT  288 (355)
T ss_dssp             TEEEEEETTSCEEEEETTTCC-EEEEECCCSSCCCEEEEC--SSEEEEECTTSEEEEEETTTCCEEE--EEECTTCCCCC
T ss_pred             eeeecccccceEEeeeccccc-cccccccccccccccccc--cceeeeeecccccccccccccceec--ccccCCceEEE
Confidence            789999999999999999887 678889999999999986  5799999999999999999876544  45666666665


Q ss_pred             E-cCCCCcEEEEEcCCCCCeEEEEECCCCcEEEEe--eCCCCEEEEEECCCCCeEEEEEecCCCcEEEEE
Q 014934          341 W-SPHLHGLLASGGGTADRCIRFWNTTTNTHLSCM--DTGSQVCNLVWSKNVNELVSTHGYSQNQIIVWR  407 (415)
Q Consensus       341 ~-sp~~~~llasggg~~d~~I~iwd~~t~~~~~~~--~~~~~V~~l~~s~~~~~l~s~~g~~dg~I~vw~  407 (415)
                      + ++++ .++++|+   |+.|++||+++|+++...  .+...|.+++|+++. .+++  ++.||++.||.
T Consensus       289 ~~~~~~-~~l~~g~---d~~i~vwd~~tg~~~~~~~~~~~~~V~~v~~~~~~-~~~~--~s~dg~~~l~~  351 (355)
T d1nexb2         289 TFYVSD-NILVSGS---ENQFNIYNLRSGKLVHANILKDADQIWSVNFKGKT-LVAA--VEKDGQSFLEI  351 (355)
T ss_dssp             EEEECS-SEEEEEE---TTEEEEEETTTCCBCCSCTTTTCSEEEEEEEETTE-EEEE--EESSSCEEEEE
T ss_pred             EEcCCC-CEEEEEe---CCEEEEEECCCCCEEEEEecCCCCCEEEEEEcCCe-EEEE--EECCCcEEEEE
Confidence            4 5554 5877774   899999999999987543  356789999999863 4444  67899865554


No 26 
>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.93  E-value=1.2e-23  Score=191.30  Aligned_cols=192  Identities=21%  Similarity=0.417  Sum_probs=159.8

Q ss_pred             CCCCCeEEEEEcCCCCeEEEEECCCcEEEEECCCCeeeEEecCCCccEEEEEeeCCEEEEEeCCCcEEEEECCCCCc---
Q 014934          206 GIDDSVCSVGWANRNTHLAVGTSHGKVQIWDASRCKRVRTMEGHRLRVGALAWSSSLLSSGSRDKSILQRDIRAQED---  282 (415)
Q Consensus       206 ~~~~~V~~v~~sp~g~~la~g~~dg~V~iwd~~~~~~~~~l~~h~~~V~~l~~~~~~l~sgs~dg~I~iwd~~~~~~---  282 (415)
                      +|...|+|++|  +|++||+|+.||+|+|||+.+++++.++.+|...|.+++|++++|++|+.|+.|++|++..+..   
T Consensus        13 ~~~~~V~c~~~--d~~~l~sgs~Dg~i~vWd~~~~~~~~~l~~H~~~V~~v~~~~~~l~s~s~D~~i~~~~~~~~~~~~~   90 (293)
T d1p22a2          13 ETSKGVYCLQY--DDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQYDERVIITGSSDSTVRVWDVNTGEMLNT   90 (293)
T ss_dssp             SSCCCEEEEEC--CSSEEEEEESSSCEEEEESSSCCEEEEECCCSSCEEEEECCSSEEEEEETTSCEEEEESSSCCEEEE
T ss_pred             CCCCCEEEEEE--cCCEEEEEeCCCeEEEEECCCCcEEEEEecCCCCEeeeecccceeeccccccccccccccccccccc
Confidence            66788998765  7999999999999999999999999999999999999999999999999999999999876531   


Q ss_pred             ---------------------------------------cEEEeccccCCeEEEEEeCCCCEEEEEeCCCcEEEEECCCC
Q 014934          283 ---------------------------------------FVSKLSGHKSEVCGLKWSYDNRELASGGNDNRLFVWNQHST  323 (415)
Q Consensus       283 ---------------------------------------~~~~~~~h~~~V~~l~~spdg~~lasg~~dg~I~iwd~~~~  323 (415)
                                                             ....+..|...|..+.+.  ...+++++.|+.|++||++++
T Consensus        91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~~~~~s~d~~i~~~d~~~~  168 (293)
T d1p22a2          91 LIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFD--DKYIVSASGDRTIKVWNTSTC  168 (293)
T ss_dssp             ECCCCSCEEEEECCTTEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEETTTC
T ss_pred             ccccccccccccccccceeecccccceeEeeccccccccccccccccccccccceec--ccccccccCCCceeeecCCCC
Confidence                                                   011133455566666554  457889999999999999999


Q ss_pred             ceeEEeccCCCcEEEEEEcCCCCcEEEEEcCCCCCeEEEEECCCCcEEEEeeCC-CCEEEEEECCCCCeEEEEEecCCCc
Q 014934          324 QPVLKYCEHTAAVKAIAWSPHLHGLLASGGGTADRCIRFWNTTTNTHLSCMDTG-SQVCNLVWSKNVNELVSTHGYSQNQ  402 (415)
Q Consensus       324 ~~~~~~~~h~~~V~~l~~sp~~~~llasggg~~d~~I~iwd~~t~~~~~~~~~~-~~V~~l~~s~~~~~l~s~~g~~dg~  402 (415)
                      +.+..+.+|...|..+.+++.   .+++++  .|+.|++||+.+++.+...... ..+.  .+++++.+|++  |+.||.
T Consensus       169 ~~~~~~~~~~~~v~~~~~~~~---~l~~~~--~dg~i~i~d~~~~~~~~~~~~~~~~v~--~~~~~~~~l~s--g~~dg~  239 (293)
T d1p22a2         169 EFVRTLNGHKRGIACLQYRDR---LVVSGS--SDNTIRLWDIECGACLRVLEGHEELVR--CIRFDNKRIVS--GAYDGK  239 (293)
T ss_dssp             CEEEEEECCSSCEEEEEEETT---EEEEEE--TTSCEEEEETTTCCEEEEECCCSSCEE--EEECCSSEEEE--EETTSC
T ss_pred             cEEEEEcccccccccccCCCC---eEEEec--CCCEEEEEecccceeeeeecccceeee--eccccceEEEE--EcCCCE
Confidence            999999999999999888753   566666  7999999999999998887643 3444  45677888888  789999


Q ss_pred             EEEEECCC
Q 014934          403 IIVWRYPT  410 (415)
Q Consensus       403 I~vw~~~s  410 (415)
                      |++||+.+
T Consensus       240 i~iwd~~~  247 (293)
T d1p22a2         240 IKVWDLVA  247 (293)
T ss_dssp             EEEEEHHH
T ss_pred             EEEEECCC
Confidence            99999754


No 27 
>d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.92  E-value=6.7e-24  Score=205.10  Aligned_cols=194  Identities=15%  Similarity=0.280  Sum_probs=148.5

Q ss_pred             cEEEEE-cCCeEEEEECCCCCeEEeE-----ec----CCCCCeEEEEEcCC-----CCeEEEEECCCcEEEEECCCCe--
Q 014934          179 NVLAVG-LGNCVYLWNACSSKVTKLC-----DL----GIDDSVCSVGWANR-----NTHLAVGTSHGKVQIWDASRCK--  241 (415)
Q Consensus       179 ~~la~~-~d~~V~iwd~~~~~~~~~~-----~~----~~~~~V~~v~~sp~-----g~~la~g~~dg~V~iwd~~~~~--  241 (415)
                      .+++++ .|+.|++|+..........     ..    .+...+..++|.++     +.++++++.||.|++|++....  
T Consensus        80 ~~~~s~~~dg~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~vw~~~~~~~~  159 (393)
T d1sq9a_          80 CLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADE  159 (393)
T ss_dssp             EEEEEEETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSH
T ss_pred             cEEEEEeCCCcEEEEEccCCCceeeeeccccceeeeccCCCceEEEEEecCCCcccccEEEEEcCCCcEEEEEeecCCcc
Confidence            345444 6899999987544321111     10    12456788888775     4688999999999999974210  


Q ss_pred             ----------------eeEEecCCCccEEEEEeeC-CEEEEEeCCCcEEEEECCCCCcc-----EEEeccccCCeEEEEE
Q 014934          242 ----------------RVRTMEGHRLRVGALAWSS-SLLSSGSRDKSILQRDIRAQEDF-----VSKLSGHKSEVCGLKW  299 (415)
Q Consensus       242 ----------------~~~~l~~h~~~V~~l~~~~-~~l~sgs~dg~I~iwd~~~~~~~-----~~~~~~h~~~V~~l~~  299 (415)
                                      .......+...+.+++|++ .+|++|+.||+|++||+++....     ...+.+|...|.+++|
T Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg~lasgs~Dg~i~iwd~~~~~~~~~~~~~~~l~~h~~~V~~l~~  239 (393)
T d1sq9a_         160 SNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERGLIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKF  239 (393)
T ss_dssp             HHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTSEEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEE
T ss_pred             cceeeeeeccceecccceecccCCCCcEEEEEECCCCEEEEEeCCCcEEEEeecccccccccccccccccccceEEEccc
Confidence                            1111224556788999995 59999999999999999987632     1234579999999999


Q ss_pred             eCCCCEEEEEeCCCc---EEEEECCCCceeEEec-------------cCCCcEEEEEEcCCCCcEEEEEcCCCCCeEEEE
Q 014934          300 SYDNRELASGGNDNR---LFVWNQHSTQPVLKYC-------------EHTAAVKAIAWSPHLHGLLASGGGTADRCIRFW  363 (415)
Q Consensus       300 spdg~~lasg~~dg~---I~iwd~~~~~~~~~~~-------------~h~~~V~~l~~sp~~~~llasggg~~d~~I~iw  363 (415)
                      +|+|++|++|+.|+.   |++||+.+++.+..+.             +|.+.|++|+|+|+++ +|++++  .|++|++|
T Consensus       240 spdg~~l~sgs~D~t~~~i~lwd~~~g~~~~~l~~~~~~~~~~~~~~gH~~~V~~l~fspd~~-~l~S~s--~D~~v~vW  316 (393)
T d1sq9a_         240 SPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGE-TLCSAG--WDGKLRFW  316 (393)
T ss_dssp             CSSTTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSS-EEEEEE--TTSEEEEE
T ss_pred             ccccceeeeecCCCCcceeeecccccceeeeeeccccccccceeeeecccCceeeeccCCCCC-eeEEEC--CCCEEEEE
Confidence            999999999999874   9999999998877764             7999999999999987 778887  89999999


Q ss_pred             ECCCCcEEEEee
Q 014934          364 NTTTNTHLSCMD  375 (415)
Q Consensus       364 d~~t~~~~~~~~  375 (415)
                      |+.+|+++..+.
T Consensus       317 d~~~g~~~~~l~  328 (393)
T d1sq9a_         317 DVKTKERITTLN  328 (393)
T ss_dssp             ETTTTEEEEEEE
T ss_pred             ECCCCCEEEEEC
Confidence            999999998875


No 28 
>d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]}
Probab=99.91  E-value=1.1e-21  Score=180.24  Aligned_cols=225  Identities=15%  Similarity=0.111  Sum_probs=175.6

Q ss_pred             EcCCeEEEEECCCCCeEEeEecCCCCCeEEEEEcCCCCeEE-EEECCCcEEEEECCCCeeeEEecCCCccEEEEEee--C
Q 014934          184 GLGNCVYLWNACSSKVTKLCDLGIDDSVCSVGWANRNTHLA-VGTSHGKVQIWDASRCKRVRTMEGHRLRVGALAWS--S  260 (415)
Q Consensus       184 ~~d~~V~iwd~~~~~~~~~~~~~~~~~V~~v~~sp~g~~la-~g~~dg~V~iwd~~~~~~~~~l~~h~~~V~~l~~~--~  260 (415)
                      +.+++|.+||+.++++...+..+  ..+..++|+|||++|+ ++..++.|.+||+.+++.+..+..+.. +..++|+  +
T Consensus         9 ~~~~~v~v~D~~t~~~~~~i~~g--~~p~~va~spdG~~l~v~~~~~~~i~v~d~~t~~~~~~~~~~~~-~~~~~~~~~~   85 (301)
T d1l0qa2           9 SESDNISVIDVTSNKVTATIPVG--SNPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGSS-PQGVAVSPDG   85 (301)
T ss_dssp             TTTTEEEEEETTTTEEEEEEECS--SSEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSSS-EEEEEECTTS
T ss_pred             CCCCEEEEEECCCCeEEEEEECC--CCceEEEEeCCCCEEEEEECCCCEEEEEECCCCceeeeeecccc-cccccccccc
Confidence            36789999999999998888644  5689999999999875 556789999999999999999887654 6778887  3


Q ss_pred             C-EEEEEeCCCcEEEEECCCCCccEEEeccccCCeEEEEEeCCCCEEEE-EeCCCcEEEEECCCCceeEEec--------
Q 014934          261 S-LLSSGSRDKSILQRDIRAQEDFVSKLSGHKSEVCGLKWSYDNRELAS-GGNDNRLFVWNQHSTQPVLKYC--------  330 (415)
Q Consensus       261 ~-~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~spdg~~las-g~~dg~I~iwd~~~~~~~~~~~--------  330 (415)
                      . .++++..++.+.+||..... ....+. +...+.++.|+|+++.++. +..++.+.+|+..+.+.+..+.        
T Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  163 (301)
T d1l0qa2          86 KQVYVTNMASSTLSVIDTTSNT-VAGTVK-TGKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVGRSPKGI  163 (301)
T ss_dssp             SEEEEEETTTTEEEEEETTTTE-EEEEEE-CSSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECCSSEEEE
T ss_pred             ccccccccccceeeecccccce-eeeecc-ccccceEEEeecCCCeeeeeeccccceeeeeccccceeeecccCCCceEE
Confidence            3 55667778899999998876 344444 3456778899999987754 5567788889887654433321        


Q ss_pred             ---------------------------------cCCCcEEEEEEcCCCCcEEEEEcCCCCCeEEEEECCCCcEEEEeeCC
Q 014934          331 ---------------------------------EHTAAVKAIAWSPHLHGLLASGGGTADRCIRFWNTTTNTHLSCMDTG  377 (415)
Q Consensus       331 ---------------------------------~h~~~V~~l~~sp~~~~llasggg~~d~~I~iwd~~t~~~~~~~~~~  377 (415)
                                                       .+...+..++|++++..+++++.+..++.|++||+.+++.+..+..+
T Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~v~v~D~~t~~~~~~~~~~  243 (301)
T d1l0qa2         164 AVTPDGTKVYVANFDSMSISVIDTVTNSVIDTVKVEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKITARIPVG  243 (301)
T ss_dssp             EECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSSEEEEEEECTTSSEEEEEEECSSCCEEEEEETTTTEEEEEEECC
T ss_pred             EeeccccceeeecccccccccccccceeeeecccccCCcceeeccccccccccccccceeeeeeeeecCCCeEEEEEcCC
Confidence                                             12234566788888887766655446788999999999999999988


Q ss_pred             CCEEEEEECCCCCeEEEEEecCCCcEEEEECCCCccc
Q 014934          378 SQVCNLVWSKNVNELVSTHGYSQNQIIVWRYPTMSKV  414 (415)
Q Consensus       378 ~~V~~l~~s~~~~~l~s~~g~~dg~I~vw~~~s~~~l  414 (415)
                      ..+.+++|+|+|++|+++ +..++.|.+||+.+++.+
T Consensus       244 ~~~~~va~spdg~~l~va-~~~~~~i~v~D~~t~~~~  279 (301)
T d1l0qa2         244 PDPAGIAVTPDGKKVYVA-LSFCNTVSVIDTATNTIT  279 (301)
T ss_dssp             SSEEEEEECTTSSEEEEE-ETTTTEEEEEETTTTEEE
T ss_pred             CCEEEEEEeCCCCEEEEE-ECCCCeEEEEECCCCeEE
Confidence            899999999999988654 667899999999988653


No 29 
>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.89  E-value=1e-21  Score=180.22  Aligned_cols=189  Identities=18%  Similarity=0.309  Sum_probs=154.3

Q ss_pred             ceeEeecCC-CcEEEEEcCCeEEEEECCCCCeEEeEecCCCCCeEEEEEcCCCCeEEEEECCC-cEEEEECCCCeeeEEe
Q 014934          169 YLNLVDWSS-HNVLAVGLGNCVYLWNACSSKVTKLCDLGIDDSVCSVGWANRNTHLAVGTSHG-KVQIWDASRCKRVRTM  246 (415)
Q Consensus       169 ~i~~l~ws~-~~~la~~~d~~V~iwd~~~~~~~~~~~~~~~~~V~~v~~sp~g~~la~g~~dg-~V~iwd~~~~~~~~~l  246 (415)
                      .+.++.+++ +.+++++.++.+.+|+..+++....+..  ...+  .++++++..+++++.++ .|++|++...+....+
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~--~~~~~~~~~~~v~~~~~~~v~~~~~~~~~~~~~~  157 (287)
T d1pgua2          82 QPKVASANNDGFTAVLTNDDDLLILQSFTGDIIKSVRL--NSPG--SAVSLSQNYVAVGLEEGNTIQVFKLSDLEVSFDL  157 (287)
T ss_dssp             CEEEEEECSSSEEEEEETTSEEEEEETTTCCEEEEEEC--SSCE--EEEEECSSEEEEEETTTSCEEEEETTEEEEEEEC
T ss_pred             ceeeeeeccCCceEEEeecccceeeeccceeeeeeccc--ccee--eeeeccCcceeeeccccceeeeeeccccceeeee
Confidence            466778888 5667777888999999999988777753  2333  45677888899988875 6999999876665555


Q ss_pred             c-CCCccEEEEEee--CCEEEEEeCCCcEEEEECCCCCccEEEeccccCCeEEEEEeCC----------CCEEEEEeCCC
Q 014934          247 E-GHRLRVGALAWS--SSLLSSGSRDKSILQRDIRAQEDFVSKLSGHKSEVCGLKWSYD----------NRELASGGNDN  313 (415)
Q Consensus       247 ~-~h~~~V~~l~~~--~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~spd----------g~~lasg~~dg  313 (415)
                      . .|...+.+++|+  +.+|++|+.||.|++||+.+.......+.+|...|.+++|+|+          +.+||+|+.|+
T Consensus       158 ~~~~~~~v~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~l~sgs~D~  237 (287)
T d1pgua2         158 KTPLRAKPSYISISPSETYIAAGDVMGKILLYDLQSREVKTSRWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDT  237 (287)
T ss_dssp             SSCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEECCSCCCSSCEEEEEECCCC------CCSCCEEEEEETTS
T ss_pred             eeccCCceeEEEeccCccccccccccccccceeecccccccccccccccccceeeecccccccccccCCCCeeEeecCCC
Confidence            4 578899999998  5799999999999999999887444457789999999999874          56899999999


Q ss_pred             cEEEEECCC-CceeEEeccCCCcEEEEEEcCCCCcEEEEEcCCCCCeEEEEEC
Q 014934          314 RLFVWNQHS-TQPVLKYCEHTAAVKAIAWSPHLHGLLASGGGTADRCIRFWNT  365 (415)
Q Consensus       314 ~I~iwd~~~-~~~~~~~~~h~~~V~~l~~sp~~~~llasggg~~d~~I~iwd~  365 (415)
                      .|+|||+++ .+.+..+.+|...|.+++|+|++  .|+++|  .|+.|++||+
T Consensus       238 ~i~iw~~~~~~~~~~~~~~h~~~V~~v~~~~~~--~l~s~g--~D~~v~iW~i  286 (287)
T d1pgua2         238 NIFIYSVKRPMKIIKALNAHKDGVNNLLWETPS--TLVSSG--ADACIKRWNV  286 (287)
T ss_dssp             CEEEEESSCTTCCEEETTSSTTCEEEEEEEETT--EEEEEE--TTSCEEEEEE
T ss_pred             eEEEEECCCCCeEEEEeCCCCCCeEEEEECCCC--EEEEEE--CCCeEEEEEE
Confidence            999999977 45677778999999999999986  355665  7999999996


No 30 
>d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa [TaxId: 287]}
Probab=99.89  E-value=9.1e-22  Score=192.27  Aligned_cols=234  Identities=13%  Similarity=0.088  Sum_probs=169.4

Q ss_pred             CCcEEEE-E-cCCeEEEEECCCCCeEEeEecCCCCCeEEEEEcCCCCeEEEEECCCcEEEEECCCCeeeEE--e---cCC
Q 014934          177 SHNVLAV-G-LGNCVYLWNACSSKVTKLCDLGIDDSVCSVGWANRNTHLAVGTSHGKVQIWDASRCKRVRT--M---EGH  249 (415)
Q Consensus       177 ~~~~la~-~-~d~~V~iwd~~~~~~~~~~~~~~~~~V~~v~~sp~g~~la~g~~dg~V~iwd~~~~~~~~~--l---~~h  249 (415)
                      +.+++++ . .++.|+|||..+++++..+..+  ..+.+++|+|||++|++++.||.|++||+.+++....  +   .+|
T Consensus        30 ~~~~~~V~~~~dg~v~vwD~~t~~~~~~l~~g--~~~~~vafSPDGk~l~~~~~d~~v~vwd~~t~~~~~~~~i~~~~~~  107 (426)
T d1hzua2          30 LPNLFSVTLRDAGQIALVDGDSKKIVKVIDTG--YAVHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKIGIEA  107 (426)
T ss_dssp             GGGEEEEEETTTTEEEEEETTTCSEEEEEECC--SSEEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEECCSEE
T ss_pred             CCeEEEEEEcCCCEEEEEECCCCcEEEEEeCC--CCeeEEEECCCCCEEEEEeCCCCEEEEEccCCceeEEEEEeCCCCC
Confidence            3344434 3 4799999999999999888743  5699999999999999999999999999998864432  2   245


Q ss_pred             CccEEEEEee--CCEE-EEEeCCCcEEEEECCCCCccEEE----------------------------------------
Q 014934          250 RLRVGALAWS--SSLL-SSGSRDKSILQRDIRAQEDFVSK----------------------------------------  286 (415)
Q Consensus       250 ~~~V~~l~~~--~~~l-~sgs~dg~I~iwd~~~~~~~~~~----------------------------------------  286 (415)
                      ...+.+++|+  ++++ +++..++.+.+||...... ...                                        
T Consensus       108 ~~~~~s~~~spDG~~l~v~~~~~~~v~i~d~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~s~d~~~~~~~~~~~~~  186 (426)
T d1hzua2         108 RSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEP-KQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGK  186 (426)
T ss_dssp             EEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCE-EEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTE
T ss_pred             cceEEeeeecCCCCEEEEeecCCCeEEEEcCCccce-eEEeeccCCCccceeecCCCceeEEEECCCCCEEEEecCCCCe
Confidence            5556666665  4555 5556889999999876431 100                                        


Q ss_pred             ---------------eccccCCeEEEEEeCCCCEEEEEe-CCCcEEEEECCCC---------------------------
Q 014934          287 ---------------LSGHKSEVCGLKWSYDNRELASGG-NDNRLFVWNQHST---------------------------  323 (415)
Q Consensus       287 ---------------~~~h~~~V~~l~~spdg~~lasg~-~dg~I~iwd~~~~---------------------------  323 (415)
                                     ...+...+..+.|+|++++++++. .++.+.+|+..++                           
T Consensus       187 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  266 (426)
T d1hzua2         187 VLLVNYKDIDNLTVTSIGAAPFLADGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGANFVHPKYGP  266 (426)
T ss_dssp             EEEEECSSSSSCEEEEEECCSSEEEEEECTTSCEEEEEETTCSEEEEEETTTTEEEEEEECSSCCCCSCCEEEEETTTEE
T ss_pred             EEEEEeccccceeeEEeccCCccEeeeECCCCcEEEeeeecccceeeeecccccEEEEeccCCcccccceeeeecCCCCc
Confidence                           112344567889999999877765 4445666665432                           


Q ss_pred             ---------------------------ceeEEeccCCCcEEEEEEcCCCCcEEEEE----cCCCCCeEEEEECCCCcEEE
Q 014934          324 ---------------------------QPVLKYCEHTAAVKAIAWSPHLHGLLASG----GGTADRCIRFWNTTTNTHLS  372 (415)
Q Consensus       324 ---------------------------~~~~~~~~h~~~V~~l~~sp~~~~llasg----gg~~d~~I~iwd~~t~~~~~  372 (415)
                                                 +....+.+|...+..++|+|++.++++..    +|..|++|++||+.+++...
T Consensus       267 ~~~~~~~~d~~v~~~~~~~~~~~~~~~~~~~~l~g~~~~v~~v~~sPdg~~l~v~~~~~~s~~~~~tv~vwd~~t~~~~~  346 (426)
T d1hzua2         267 VWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLDAKY  346 (426)
T ss_dssp             EEEEECTTTCEEEEEECCTTTCTTTBTSEEEEEECSSSCCCCEECCTTCSEEEECCTTCSSHHHHTCEEEEETTCTTSCC
T ss_pred             eEEeccCCCceEEEeeccccccccccceEeEEEecCCCceeEEEcCCCCceEEEeecCCCCcccCCEEEEEECCCCCcCe
Confidence                                       33445667888899999999999766532    12267899999999998765


Q ss_pred             Ee----------eCCCCEEEEEECCCCCeEEEEE---ecCCCcEEEEECCCCcc
Q 014934          373 CM----------DTGSQVCNLVWSKNVNELVSTH---GYSQNQIIVWRYPTMSK  413 (415)
Q Consensus       373 ~~----------~~~~~V~~l~~s~~~~~l~s~~---g~~dg~I~vw~~~s~~~  413 (415)
                      ++          ++...|.+++|||||++++++.   +..++.|+|||..+++.
T Consensus       347 ~~~~~~~~~~~~~~~~rv~~~~fSpDGk~i~vs~~~~~~~~~~i~v~D~~T~k~  400 (426)
T d1hzua2         347 QVLPIAEWADLGEGAKRVVQPEYNKRGDEVWFSVWNGKNDSSALVVVDDKTLKL  400 (426)
T ss_dssp             EEECHHHHHCCCSSCCCEEEEEECSSSSEEEEEECCCTTSCCEEEEEETTTTEE
T ss_pred             EEeccchhcccCCCCccEEEEEECCCCCEEEEEEecCCCCCCeEEEEECCCCeE
Confidence            54          2455699999999999886542   24578999999999864


No 31 
>d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]}
Probab=99.89  E-value=6.3e-21  Score=177.53  Aligned_cols=224  Identities=12%  Similarity=0.048  Sum_probs=171.9

Q ss_pred             EEEEEcCCeEEEEECCCCCeEEeEecC-CCCCeEEEEEcCCCCeEE-EEECCCcEEEEECCCCeeeEEecCCCcc-----
Q 014934          180 VLAVGLGNCVYLWNACSSKVTKLCDLG-IDDSVCSVGWANRNTHLA-VGTSHGKVQIWDASRCKRVRTMEGHRLR-----  252 (415)
Q Consensus       180 ~la~~~d~~V~iwd~~~~~~~~~~~~~-~~~~V~~v~~sp~g~~la-~g~~dg~V~iwd~~~~~~~~~l~~h~~~-----  252 (415)
                      +++++.+++|++||+.++++...+... +...+.+++|+|||++++ +++.+|.|.+||+.+++.+..+..+...     
T Consensus         4 ~vt~~~d~~v~v~D~~s~~~~~~i~~~~~~~~~~~i~~spDg~~l~v~~~~~~~v~v~D~~t~~~~~~~~~~~~~~~~~~   83 (337)
T d1pbyb_           4 ILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERVKS   83 (337)
T ss_dssp             EEEEETTTEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEEEC
T ss_pred             EEEEcCCCEEEEEECCCCeEEEEEECCCCCCCccEEEECCCCCEEEEEECCCCeEEEEECCCCcEEEEEecCCCcccccc
Confidence            455557899999999999998888764 346688999999999874 5667999999999999998888765433     


Q ss_pred             EEEEEee--CCEEEEEe------------CCCcEEEEECCCCCccEEEeccccCCeEEEEEeCCCCEEEEEeCCCcEEEE
Q 014934          253 VGALAWS--SSLLSSGS------------RDKSILQRDIRAQEDFVSKLSGHKSEVCGLKWSYDNRELASGGNDNRLFVW  318 (415)
Q Consensus       253 V~~l~~~--~~~l~sgs------------~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~spdg~~lasg~~dg~I~iw  318 (415)
                      +..++|+  ++.++++.            .+..+.+||..... ....+. +...+.+++|+|||+++++++.+  +.+|
T Consensus        84 ~~~v~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~-~~~~~~-~~~~~~~~~~s~dg~~l~~~~~~--~~~~  159 (337)
T d1pbyb_          84 LFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLS-RRKAFE-APRQITMLAWARDGSKLYGLGRD--LHVM  159 (337)
T ss_dssp             TTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTE-EEEEEE-CCSSCCCEEECTTSSCEEEESSS--EEEE
T ss_pred             eeeEEEcCCCcEEEEeecCCcceeeeccccccceeeccccCCe-EEEecc-ccCCceEEEEcCCCCEEEEEcCC--ccee
Confidence            3356776  45666654            46788999998876 344444 44568899999999999998654  6778


Q ss_pred             ECCCCceeEEe------------------------------------------------------------------ccC
Q 014934          319 NQHSTQPVLKY------------------------------------------------------------------CEH  332 (415)
Q Consensus       319 d~~~~~~~~~~------------------------------------------------------------------~~h  332 (415)
                      |..+++....+                                                                  ..+
T Consensus       160 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (337)
T d1pbyb_         160 DPEAGTLVEDKPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIM  239 (337)
T ss_dssp             ETTTTEEEEEECSTTTTTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEEEC
T ss_pred             eeecCcEEEEeecCCccccceecCCcceeeccccccceeeeeeeeeeeccceeeecccCccEEEEEcCCCcEEEEEecCC
Confidence            87654332222                                                                  123


Q ss_pred             CCcEEEEEEcCCCCcEEEEEcCCCCCeEEEEECCCCcEEEEeeCCCCEEEEEECCCCCeEEEEEecCCCcEEEEECCCCc
Q 014934          333 TAAVKAIAWSPHLHGLLASGGGTADRCIRFWNTTTNTHLSCMDTGSQVCNLVWSKNVNELVSTHGYSQNQIIVWRYPTMS  412 (415)
Q Consensus       333 ~~~V~~l~~sp~~~~llasggg~~d~~I~iwd~~t~~~~~~~~~~~~V~~l~~s~~~~~l~s~~g~~dg~I~vw~~~s~~  412 (415)
                      ...+..++++|++.. ++.    .++.|++||+.+++.+..+.++..+.+++|+|+|++|++  ++.+|.|.|||..+++
T Consensus       240 ~~~~~~~~~~~~~~~-~~~----~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~s~dG~~l~v--~~~~~~i~v~D~~t~~  312 (337)
T d1pbyb_         240 DVFYFSTAVNPAKTR-AFG----AYNVLESFDLEKNASIKRVPLPHSYYSVNVSTDGSTVWL--GGALGDLAAYDAETLE  312 (337)
T ss_dssp             SSCEEEEEECTTSSE-EEE----EESEEEEEETTTTEEEEEEECSSCCCEEEECTTSCEEEE--ESBSSEEEEEETTTCC
T ss_pred             CcceEEEEecccceE-EEE----ccccEEEEECCCCcEEEEEcCCCCEEEEEECCCCCEEEE--EeCCCcEEEEECCCCc
Confidence            344555667777653 332    268999999999999999999889999999999999998  7789999999999988


Q ss_pred             cc
Q 014934          413 KV  414 (415)
Q Consensus       413 ~l  414 (415)
                      ++
T Consensus       313 ~v  314 (337)
T d1pbyb_         313 KK  314 (337)
T ss_dssp             EE
T ss_pred             EE
Confidence            64


No 32 
>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.88  E-value=1.2e-21  Score=181.51  Aligned_cols=236  Identities=15%  Similarity=0.112  Sum_probs=175.5

Q ss_pred             cceeEeecCC--CcEEEEE-cCCeEEEEECCCCCeEEeEecCCCCCeEEEEEcCCCCeEEEEECCCcEEEEECCCCe---
Q 014934          168 FYLNLVDWSS--HNVLAVG-LGNCVYLWNACSSKVTKLCDLGIDDSVCSVGWANRNTHLAVGTSHGKVQIWDASRCK---  241 (415)
Q Consensus       168 ~~i~~l~ws~--~~~la~~-~d~~V~iwd~~~~~~~~~~~~~~~~~V~~v~~sp~g~~la~g~~dg~V~iwd~~~~~---  241 (415)
                      -.|.+++|++  +.+|++| .|+.|++|+...+.........+........+.+++..+++++.++.+++||+.+..   
T Consensus        57 ~~V~~v~f~~~~~~~l~sg~~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wd~~~~~~~~  136 (342)
T d1yfqa_          57 HPLLCCNFIDNTDLQIYVGTVQGEILKVDLIGSPSFQALTNNEANLGICRICKYGDDKLIAASWDGLIEVIDPRNYGDGV  136 (342)
T ss_dssp             SCEEEEEEEESSSEEEEEEETTSCEEEECSSSSSSEEECBSCCCCSCEEEEEEETTTEEEEEETTSEEEEECHHHHTTBC
T ss_pred             CCEEEEEEeCCCCCEEEEcccccceeeeecccccccccccccccccccccccccccccccccccccccceeeccccccce
Confidence            3589999987  3466665 689999999998877766654555666677777888999999999999999985432   


Q ss_pred             -eeEEecCC----CccEEEEEeeCCEEEEEeCCCcEEEEECCCCCcc--EEEeccccCCeEEEEEe-CCCCEEEEEeCCC
Q 014934          242 -RVRTMEGH----RLRVGALAWSSSLLSSGSRDKSILQRDIRAQEDF--VSKLSGHKSEVCGLKWS-YDNRELASGGNDN  313 (415)
Q Consensus       242 -~~~~l~~h----~~~V~~l~~~~~~l~sgs~dg~I~iwd~~~~~~~--~~~~~~h~~~V~~l~~s-pdg~~lasg~~dg  313 (415)
                       .......+    ......+...+..+++++.|+.|++||++.....  ......+...+.+..+. .++..+++++.||
T Consensus       137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg  216 (342)
T d1yfqa_         137 IAVKNLNSNNTKVKNKIFTMDTNSSRLIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDG  216 (342)
T ss_dssp             EEEEESCSSSSSSCCCEEEEEECSSEEEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETTS
T ss_pred             eeecccccccccceeeeeeeeccCCceeeecCCCcEEEEecccCcccceeeeecccccceeeeEeecCCCCEEEeecCCC
Confidence             22223222    2234445555789999999999999999876532  23333445556666655 4778999999999


Q ss_pred             cEEEEECCCCcee------E---------EeccCCCcEEEEEEcCCCCcEEEEEcCCCCCeEEEEECCCCcEEEEeeCCC
Q 014934          314 RLFVWNQHSTQPV------L---------KYCEHTAAVKAIAWSPHLHGLLASGGGTADRCIRFWNTTTNTHLSCMDTGS  378 (415)
Q Consensus       314 ~I~iwd~~~~~~~------~---------~~~~h~~~V~~l~~sp~~~~llasggg~~d~~I~iwd~~t~~~~~~~~~~~  378 (415)
                      .+.+|+.......      .         ....|...|.+++|+|+++ +|++|+  .||.|++||+.+++.+..+....
T Consensus       217 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~sp~~~-~lasg~--~Dg~v~vWD~~~~~~l~~~~~~~  293 (342)
T d1yfqa_         217 RVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHK-FLYTAG--SDGIISCWNLQTRKKIKNFAKFN  293 (342)
T ss_dssp             EEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTC-CEEEEE--TTSCEEEEETTTTEEEEECCCCS
T ss_pred             eEEEEEecCCcceeeccccceeeeeeeccCCCcccccceeEEecCCcc-EEEEEC--CCCEEEEEECCCCcEEEEecCCC
Confidence            9999997643211      1         1135777899999999997 677777  89999999999999999887666


Q ss_pred             CEEEEEECCCCCeEEEEEecCCCcEEEEEC
Q 014934          379 QVCNLVWSKNVNELVSTHGYSQNQIIVWRY  408 (415)
Q Consensus       379 ~V~~l~~s~~~~~l~s~~g~~dg~I~vw~~  408 (415)
                      .+..++|+++++.|+++  +.|+.+++|..
T Consensus       294 ~~~~~~~s~~~~~l~~a--~sdd~~~~~~~  321 (342)
T d1yfqa_         294 EDSVVKIACSDNILCLA--TSDDTFKTNAA  321 (342)
T ss_dssp             SSEEEEEEECSSEEEEE--EECTHHHHCSS
T ss_pred             CCEEEEEEeCCCEEEEE--EcCCcEEEeee
Confidence            77778899999999984  45666666654


No 33 
>d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}
Probab=99.88  E-value=2.1e-21  Score=182.81  Aligned_cols=192  Identities=9%  Similarity=0.049  Sum_probs=162.8

Q ss_pred             EEEEcC-CCCeEEEEECCCcEEEEECCCCeeeEEecCCCccEEEEEeeC--CEEEEEeCC-C-cEEEEECCCCCccEEEe
Q 014934          213 SVGWAN-RNTHLAVGTSHGKVQIWDASRCKRVRTMEGHRLRVGALAWSS--SLLSSGSRD-K-SILQRDIRAQEDFVSKL  287 (415)
Q Consensus       213 ~v~~sp-~g~~la~g~~dg~V~iwd~~~~~~~~~l~~h~~~V~~l~~~~--~~l~sgs~d-g-~I~iwd~~~~~~~~~~~  287 (415)
                      .-.||| ||+++|+++ +|.|.+||+..+..++ + +|...|.+++|++  +.|++++.+ + .|++||.+++.  ...+
T Consensus         7 ~~~fSP~dG~~~a~~~-~g~v~v~d~~~~~~~~-~-~~~~~v~~~~~spDg~~l~~~~~~~g~~v~v~d~~~~~--~~~~   81 (360)
T d1k32a3           7 AEDFSPLDGDLIAFVS-RGQAFIQDVSGTYVLK-V-PEPLRIRYVRRGGDTKVAFIHGTREGDFLGIYDYRTGK--AEKF   81 (360)
T ss_dssp             EEEEEECGGGCEEEEE-TTEEEEECTTSSBEEE-C-SCCSCEEEEEECSSSEEEEEEEETTEEEEEEEETTTCC--EEEC
T ss_pred             cccccCCCCCEEEEEE-CCeEEEEECCCCcEEE-c-cCCCCEEEEEECCCCCEEEEEEcCCCCEEEEEECCCCc--EEEe
Confidence            356999 999999876 5799999998877654 3 6999999999994  566655544 3 79999998876  5677


Q ss_pred             ccccCCeEEEEEeCCCCEEEEEeCCCcEEEEECCCCceeEEeccCCCcEEEEEEcCCCCcEEEEEc-------CCCCCeE
Q 014934          288 SGHKSEVCGLKWSYDNRELASGGNDNRLFVWNQHSTQPVLKYCEHTAAVKAIAWSPHLHGLLASGG-------GTADRCI  360 (415)
Q Consensus       288 ~~h~~~V~~l~~spdg~~lasg~~dg~I~iwd~~~~~~~~~~~~h~~~V~~l~~sp~~~~llasgg-------g~~d~~I  360 (415)
                      ..|...|.+++|+|+|++|++++.++.+++|++.+++....+..|...+.+++|+|+|+.++.+..       +..++.+
T Consensus        82 ~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~la~~~~~~~~~~~~~~~~~~  161 (360)
T d1k32a3          82 EENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAI  161 (360)
T ss_dssp             CCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEE
T ss_pred             eCCCceEEeeeecccccccceeccccccccccccccceeeeeecccccccchhhccceeeeeeeccccccceeeccccce
Confidence            889999999999999999999999999999999999999889899999999999999986655431       2356789


Q ss_pred             EEEECCCCcEEEEeeCCCCEEEEEECCCCCeEEEEEecCCCcEEEEECCCC
Q 014934          361 RFWNTTTNTHLSCMDTGSQVCNLVWSKNVNELVSTHGYSQNQIIVWRYPTM  411 (415)
Q Consensus       361 ~iwd~~t~~~~~~~~~~~~V~~l~~s~~~~~l~s~~g~~dg~I~vw~~~s~  411 (415)
                      ++||+.+++......+...+..+.|+|+|+.|++  ++.++.+.+|+....
T Consensus       162 ~v~d~~~~~~~~~~~~~~~~~~~~~spdg~~l~~--~s~~~~~~~~d~~~~  210 (360)
T d1k32a3         162 HVYDMEGRKIFAATTENSHDYAPAFDADSKNLYY--LSYRSLDPSPDRVVL  210 (360)
T ss_dssp             EEEETTTTEEEECSCSSSBEEEEEECTTSCEEEE--EESCCCCCEECSSSS
T ss_pred             eeeccccCceeeecccccccccccccCCCCEEEE--EeCCCceEccccccc
Confidence            9999999988877778888999999999999998  668899999987554


No 34 
>d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]}
Probab=99.84  E-value=3e-19  Score=166.62  Aligned_cols=235  Identities=13%  Similarity=0.070  Sum_probs=165.3

Q ss_pred             eecCC-CcEEEEE-cCCeEEEEECCCCCeEEeEecCCCCCeEEEEEcCCCCeEEE-EECCCcEEEEECCCCeeeEEecCC
Q 014934          173 VDWSS-HNVLAVG-LGNCVYLWNACSSKVTKLCDLGIDDSVCSVGWANRNTHLAV-GTSHGKVQIWDASRCKRVRTMEGH  249 (415)
Q Consensus       173 l~ws~-~~~la~~-~d~~V~iwd~~~~~~~~~~~~~~~~~V~~v~~sp~g~~la~-g~~dg~V~iwd~~~~~~~~~l~~h  249 (415)
                      +++++ +++|+++ .++.|.+||+.++++...+.+.+...+.+++|+|||+++++ +..++.|.+||+.+++.+..+...
T Consensus         2 ~a~~~~~~~l~~~~~~~~v~v~D~~t~~~~~t~~~~~~~~p~~l~~spDG~~l~v~~~~~~~v~~~d~~t~~~~~~~~~~   81 (346)
T d1jmxb_           2 PALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANLS   81 (346)
T ss_dssp             CCCCTTCEEEEEEETTTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEESC
T ss_pred             ccCCCCCcEEEEEcCCCEEEEEECCCCCEEEEEEcCCCCCcceEEECCCCCEEEEEECCCCcEEEEeCccCeeeeeeccc
Confidence            35677 6777776 57899999999999999888777778899999999998755 457899999999999988776532


Q ss_pred             C------ccEEEEEee--CCEEEEEe------------CCCcEEEEECCCCCccEEEecc--ccCCeEEEEEeCCCCEEE
Q 014934          250 R------LRVGALAWS--SSLLSSGS------------RDKSILQRDIRAQEDFVSKLSG--HKSEVCGLKWSYDNRELA  307 (415)
Q Consensus       250 ~------~~V~~l~~~--~~~l~sgs------------~dg~I~iwd~~~~~~~~~~~~~--h~~~V~~l~~spdg~~la  307 (415)
                      .      ..+..++|+  ++++++++            .++.+.+||..++.. ...+..  ....+..+.+++++.+++
T Consensus        82 ~~~~~~~~~~~~v~~s~DG~~l~v~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (346)
T d1jmxb_          82 SVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLE-AKPVRTFPMPRQVYLMRAADDGSLYV  160 (346)
T ss_dssp             CSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGG-BCCSEEEECCSSCCCEEECTTSCEEE
T ss_pred             ccccccCCceEEEEEecCCCEEEEEecCCcceeeeeccCcceEEEEeccccee-eeEEEeeeccCceEEEEecCCCEEEE
Confidence            2      123456776  45666554            467788898876542 111111  112333444444444443


Q ss_pred             EE----------------------------------------------------------------eCCCcEEEEECCCC
Q 014934          308 SG----------------------------------------------------------------GNDNRLFVWNQHST  323 (415)
Q Consensus       308 sg----------------------------------------------------------------~~dg~I~iwd~~~~  323 (415)
                      ++                                                                ..++.+.+||+.++
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (346)
T d1jmxb_         161 AGPDIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTG  240 (346)
T ss_dssp             ESSSEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEETTTC
T ss_pred             eCCcceEEEccCCCEEEEEecCCCccceEEeccccEEEEEecCCCceEeeeeeeeeccCceeEeeccCCceEEEEECCCC
Confidence            32                                                                11122333444433


Q ss_pred             ceeE-EeccCCCcEEEEEEcCCCCcEEEEEcCCCCCeEEEEECCCCcEEEEeeCCCCEEEEEECCCCCeEEEEEecCCCc
Q 014934          324 QPVL-KYCEHTAAVKAIAWSPHLHGLLASGGGTADRCIRFWNTTTNTHLSCMDTGSQVCNLVWSKNVNELVSTHGYSQNQ  402 (415)
Q Consensus       324 ~~~~-~~~~h~~~V~~l~~sp~~~~llasggg~~d~~I~iwd~~t~~~~~~~~~~~~V~~l~~s~~~~~l~s~~g~~dg~  402 (415)
                      .... .+..|...+..+.+++++..++...    ++.|.+||+.+++.+..+..+..+.+++|+|||++|++  ++.|+.
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~v~v~d~~~~~~~~~~~~~~~~~~va~s~DG~~l~v--~~~d~~  314 (346)
T d1jmxb_         241 KTHTQEFADLTELYFTGLRSPKDPNQIYGV----LNRLAKYDLKQRKLIKAANLDHTYYCVAFDKKGDKLYL--GGTFND  314 (346)
T ss_dssp             CEEEEEEEECSSCEEEEEECSSCTTEEEEE----ESEEEEEETTTTEEEEEEECSSCCCEEEECSSSSCEEE--ESBSSE
T ss_pred             ceEEEEeecccceeEEEEEeCCCCEEEEec----CCeEEEEECCCCcEEEEEcCCCCEEEEEEcCCCCEEEE--EeCCCc
Confidence            3222 2234666777888888887655433    56899999999999999998889999999999999999  678999


Q ss_pred             EEEEECCCCccc
Q 014934          403 IIVWRYPTMSKV  414 (415)
Q Consensus       403 I~vw~~~s~~~l  414 (415)
                      |.|||..+++.+
T Consensus       315 v~v~D~~t~~~i  326 (346)
T d1jmxb_         315 LAVFNPDTLEKV  326 (346)
T ss_dssp             EEEEETTTTEEE
T ss_pred             EEEEECccCCEE
Confidence            999999998764


No 35 
>d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Paracoccus denitrificans [TaxId: 266]}
Probab=99.79  E-value=4.5e-17  Score=159.19  Aligned_cols=227  Identities=12%  Similarity=0.053  Sum_probs=163.4

Q ss_pred             CcEEEEE--cCCeEEEEECCCCCeEEeEecCCCCCeEEEEEcCCCCeEEEEECCCcEEEEECCCCee--eEEe---cCCC
Q 014934          178 HNVLAVG--LGNCVYLWNACSSKVTKLCDLGIDDSVCSVGWANRNTHLAVGTSHGKVQIWDASRCKR--VRTM---EGHR  250 (415)
Q Consensus       178 ~~~la~~--~d~~V~iwd~~~~~~~~~~~~~~~~~V~~v~~sp~g~~la~g~~dg~V~iwd~~~~~~--~~~l---~~h~  250 (415)
                      .+++++.  .++.|.|||..++++...+..+  ..+..++|+|||++|++++.||.|.+||+.+++.  +..+   .+|.
T Consensus        31 ~~~~~v~~~d~g~v~v~D~~t~~v~~~~~~g--~~~~~v~fSpDG~~l~~~s~dg~v~~~d~~t~~~~~~~~i~~~~~~~  108 (432)
T d1qksa2          31 ENLFSVTLRDAGQIALIDGSTYEIKTVLDTG--YAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGSEAR  108 (432)
T ss_dssp             GGEEEEEETTTTEEEEEETTTCCEEEEEECS--SCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECCSEEE
T ss_pred             CcEEEEEEcCCCEEEEEECCCCcEEEEEeCC--CCeeEEEECCCCCEEEEEcCCCCEEEEEeeCCCceEEEEEecCCCCC
Confidence            3454343  4689999999999999998744  4699999999999999999999999999987653  3333   2455


Q ss_pred             ccEEEEEee--CCE-EEEEeCCCcEEEEECCCCCccEEEecc-----------ccCCeEEEEEeCCCCEEE-EEeCCCcE
Q 014934          251 LRVGALAWS--SSL-LSSGSRDKSILQRDIRAQEDFVSKLSG-----------HKSEVCGLKWSYDNRELA-SGGNDNRL  315 (415)
Q Consensus       251 ~~V~~l~~~--~~~-l~sgs~dg~I~iwd~~~~~~~~~~~~~-----------h~~~V~~l~~spdg~~la-sg~~dg~I  315 (415)
                      +.+.+..|+  +++ +++++.+++|.+||..+++ ++..+..           +......+.++|+|..++ +...++.|
T Consensus       109 ~~~~s~~~SpDG~~l~vs~~~~~~v~i~d~~t~~-~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg~~~~vs~~~~~~i  187 (432)
T d1qksa2         109 SIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLE-PKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKI  187 (432)
T ss_dssp             EEEECCSTTCTTTEEEEEEEETTEEEEEETTTCC-EEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEE
T ss_pred             CeEEecccCCCCCEEEEEcCCCCeEEEEeCcccc-ceeeeccCCccccceeccCCCceeEEEECCCCCEEEEEEccCCeE
Confidence            555555665  465 4788899999999999887 4444433           334567788999998764 56678999


Q ss_pred             EEEECCCCceeEEec-cCCCcEEEEEEcCCCCcEEEEEcCCCCCeEEEEECCCCcEEEEeeCC------CCEEEEEECCC
Q 014934          316 FVWNQHSTQPVLKYC-EHTAAVKAIAWSPHLHGLLASGGGTADRCIRFWNTTTNTHLSCMDTG------SQVCNLVWSKN  388 (415)
Q Consensus       316 ~iwd~~~~~~~~~~~-~h~~~V~~l~~sp~~~~llasggg~~d~~I~iwd~~t~~~~~~~~~~------~~V~~l~~s~~  388 (415)
                      .+||..+.+...... .+...+..++|+|+|+++++++.  .+..+.++|..+++.+..+.++      .......+...
T Consensus       188 ~~~d~~~~~~~~~~~i~~g~~~~~~~~spdg~~~~va~~--~~~~v~v~d~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~  265 (432)
T d1qksa2         188 LLVDYTDLNNLKTTEISAERFLHDGGLDGSHRYFITAAN--ARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGANFVHPTF  265 (432)
T ss_dssp             EEEETTCSSEEEEEEEECCSSEEEEEECTTSCEEEEEEG--GGTEEEEEETTTTEEEEEEECSSSSBCCTTCEEEEETTT
T ss_pred             EEEEccCCCcceEEEEcccCccccceECCCCCEEEEecc--ccceEEEeecccceEEEEeccCccccccCcccceecCCC
Confidence            999998876544332 45667899999999998888876  6889999999988877766533      22333444444


Q ss_pred             CCeEEEEEecCCCcEEEEECCC
Q 014934          389 VNELVSTHGYSQNQIIVWRYPT  410 (415)
Q Consensus       389 ~~~l~s~~g~~dg~I~vw~~~s  410 (415)
                      +...++. ...++.|.+|...+
T Consensus       266 g~~~~~~-~lg~~~v~~~~~~~  286 (432)
T d1qksa2         266 GPVWATS-HMGDDSVALIGTDP  286 (432)
T ss_dssp             EEEEEEE-BSSSSEEEEEECCT
T ss_pred             Cceeccc-ccCCceEEeccccc
Confidence            4444332 22355666665543


No 36 
>d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Paracoccus denitrificans [TaxId: 266]}
Probab=99.77  E-value=2.3e-17  Score=161.29  Aligned_cols=189  Identities=13%  Similarity=0.046  Sum_probs=154.4

Q ss_pred             CeEEEEECCCcEEEEECCCCeeeEEecCCCccEEEEEee--CCEEEEEeCCCcEEEEECCCCCcc-EEE---eccccCCe
Q 014934          221 THLAVGTSHGKVQIWDASRCKRVRTMEGHRLRVGALAWS--SSLLSSGSRDKSILQRDIRAQEDF-VSK---LSGHKSEV  294 (415)
Q Consensus       221 ~~la~g~~dg~V~iwd~~~~~~~~~l~~h~~~V~~l~~~--~~~l~sgs~dg~I~iwd~~~~~~~-~~~---~~~h~~~V  294 (415)
                      -++++.+.+|+|.|||..+++++..+..+. .+..++|+  ++++++++.|+.|.+||+.+.+.. ...   ..+|...+
T Consensus        33 ~~~v~~~d~g~v~v~D~~t~~v~~~~~~g~-~~~~v~fSpDG~~l~~~s~dg~v~~~d~~t~~~~~~~~i~~~~~~~~~~  111 (432)
T d1qksa2          33 LFSVTLRDAGQIALIDGSTYEIKTVLDTGY-AVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGSEARSIE  111 (432)
T ss_dssp             EEEEEETTTTEEEEEETTTCCEEEEEECSS-CEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECCSEEEEEE
T ss_pred             EEEEEEcCCCEEEEEECCCCcEEEEEeCCC-CeeEEEECCCCCEEEEEcCCCCEEEEEeeCCCceEEEEEecCCCCCCeE
Confidence            345788889999999999999999998774 69999999  579999999999999999876532 222   23555666


Q ss_pred             EEEEEeCCCCEE-EEEeCCCcEEEEECCCCceeEEecc-----------CCCcEEEEEEcCCCCcEEEEEcCCCCCeEEE
Q 014934          295 CGLKWSYDNREL-ASGGNDNRLFVWNQHSTQPVLKYCE-----------HTAAVKAIAWSPHLHGLLASGGGTADRCIRF  362 (415)
Q Consensus       295 ~~l~~spdg~~l-asg~~dg~I~iwd~~~~~~~~~~~~-----------h~~~V~~l~~sp~~~~llasggg~~d~~I~i  362 (415)
                      .+..|+|||++| +++..++.|.|||..+++++..+..           +.....++.++|++..++++..  .++.|.+
T Consensus       112 ~s~~~SpDG~~l~vs~~~~~~v~i~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg~~~~vs~~--~~~~i~~  189 (432)
T d1qksa2         112 TSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVK--ETGKILL  189 (432)
T ss_dssp             ECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEET--TTTEEEE
T ss_pred             EecccCCCCCEEEEEcCCCCeEEEEeCccccceeeeccCCccccceeccCCCceeEEEECCCCCEEEEEEc--cCCeEEE
Confidence            677788899986 6788899999999999998877654           3455678999999998888876  7899999


Q ss_pred             EECCCCcEE--EEeeCCCCEEEEEECCCCCeEEEEEecCCCcEEEEECCCCcc
Q 014934          363 WNTTTNTHL--SCMDTGSQVCNLVWSKNVNELVSTHGYSQNQIIVWRYPTMSK  413 (415)
Q Consensus       363 wd~~t~~~~--~~~~~~~~V~~l~~s~~~~~l~s~~g~~dg~I~vw~~~s~~~  413 (415)
                      ||..+++..  ..+.++..+..+.|+|+|++++++ +..++.+.+++..+.+.
T Consensus       190 ~d~~~~~~~~~~~i~~g~~~~~~~~spdg~~~~va-~~~~~~v~v~d~~~~~~  241 (432)
T d1qksa2         190 VDYTDLNNLKTTEISAERFLHDGGLDGSHRYFITA-ANARNKLVVIDTKEGKL  241 (432)
T ss_dssp             EETTCSSEEEEEEEECCSSEEEEEECTTSCEEEEE-EGGGTEEEEEETTTTEE
T ss_pred             EEccCCCcceEEEEcccCccccceECCCCCEEEEe-ccccceEEEeecccceE
Confidence            999988754  456788889999999999998886 45677999999887654


No 37 
>d2madh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]}
Probab=99.77  E-value=4.7e-16  Score=147.24  Aligned_cols=238  Identities=7%  Similarity=-0.089  Sum_probs=161.3

Q ss_pred             ceeEeecCC-CcEEEEE------cCCeEEEEECCCCCeEEeEecCCCCCeEEEEEcCCCCeEEEEEC----------CCc
Q 014934          169 YLNLVDWSS-HNVLAVG------LGNCVYLWNACSSKVTKLCDLGIDDSVCSVGWANRNTHLAVGTS----------HGK  231 (415)
Q Consensus       169 ~i~~l~ws~-~~~la~~------~d~~V~iwd~~~~~~~~~~~~~~~~~V~~v~~sp~g~~la~g~~----------dg~  231 (415)
                      .++.++++| +..+++.      ..+.|++||..+++....+.. +  ....++|+|||++|+++..          ++.
T Consensus        22 p~~~~a~spdg~~~~~~~~~~~~~~~~v~v~D~~tg~~~~~~~~-~--~~~~~a~SpDG~~l~va~~~~~~~~~~~~~~~   98 (373)
T d2madh_          22 PTNDEAPGADGRRSYINLPAHHSAIIQQWVLDAGSGSILGHVNG-G--FLPNPVAAHSGSEFALASTSFSRIAKGKRTDY   98 (373)
T ss_pred             CccccccCCCCCEEEEEcccccCCCceEEEEECCCCCEEEEEeC-C--CCccEEEcCCCCEEEEEeecCCcccccccceE
Confidence            356677888 5555543      235799999999998887753 2  2347999999999998753          578


Q ss_pred             EEEEECCCCeeeEEecCCCccEEEEEee---------CCEEE--EEeCCCcEEEEECCCCCccEEEeccccCCeEEEEEe
Q 014934          232 VQIWDASRCKRVRTMEGHRLRVGALAWS---------SSLLS--SGSRDKSILQRDIRAQEDFVSKLSGHKSEVCGLKWS  300 (415)
Q Consensus       232 V~iwd~~~~~~~~~l~~h~~~V~~l~~~---------~~~l~--sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~s  300 (415)
                      |.+||..+++.+..+..+......+...         +..++  ....++.+.+|+..... .    ..+.....++.++
T Consensus        99 v~v~D~~t~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~~~~~~~~~~~~-~----~~~~~~~~~~~~s  173 (373)
T d2madh_          99 VEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVVQGGSS-D----DQLLSSPTCYHIH  173 (373)
T ss_pred             EEEEECCCCcEEEEEecCCcceeEeccCCCcEEEEeCCCcEEEEEEcCCCceEEeeccCCe-E----EEEeccceeEEEe
Confidence            9999999999988887766655444333         23222  22334556666665443 1    2233456678899


Q ss_pred             CCCCEE-EEEeCCCcEEEEECCCCceeEEec-------------------------------------------------
Q 014934          301 YDNREL-ASGGNDNRLFVWNQHSTQPVLKYC-------------------------------------------------  330 (415)
Q Consensus       301 pdg~~l-asg~~dg~I~iwd~~~~~~~~~~~-------------------------------------------------  330 (415)
                      |+|+.+ ++.+.|+.+.+||...++......                                                 
T Consensus       174 ~~g~~~~v~~~~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~  253 (373)
T d2madh_         174 PGAPSTFYLLCAQGGLAKTDHAGGAAGAGLVGAMLTAAQNLLTQPAQANKSGRIVWPVYSGKILQADISAAGATNKAPID  253 (373)
T ss_pred             cCCCcEEEEEcCCCeEEEEEcCCceeeEEEeeeccccCccceeeeEEECCCceEEEecCCceEEEEEcCCCeEEEEEeec
Confidence            988754 677889999999976543222110                                                 


Q ss_pred             cCC----------CcEEEEEEcCCCCcEEEEEc-------CCCCCeEEEEECCCCcEEEEeeCCCCEEEEEECCCCCeEE
Q 014934          331 EHT----------AAVKAIAWSPHLHGLLASGG-------GTADRCIRFWNTTTNTHLSCMDTGSQVCNLVWSKNVNELV  393 (415)
Q Consensus       331 ~h~----------~~V~~l~~sp~~~~llasgg-------g~~d~~I~iwd~~t~~~~~~~~~~~~V~~l~~s~~~~~l~  393 (415)
                      .+.          .....+++++++..++....       ...++.|.+||+.+++.+..+.++..+..++|+|||+.++
T Consensus       254 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~v~~~d~~t~~~~~~~~~~~~~~~~a~spDG~~~l  333 (373)
T d2madh_         254 ALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQISLGHDVDAISVAQDGGPDL  333 (373)
T ss_pred             cccCcEEeeeeccCcceeeEEecCCCeEEEecCCCceEEeecCCCeEEEEECCCCcEEEEecCCCCeeEEEECCCCCEEE
Confidence            000          01123455555554332211       1146789999999999999999999999999999999754


Q ss_pred             EEEecCCCcEEEEECCCCccc
Q 014934          394 STHGYSQNQIIVWRYPTMSKV  414 (415)
Q Consensus       394 s~~g~~dg~I~vw~~~s~~~l  414 (415)
                      ...+..|+.|+|||+.+++.+
T Consensus       334 ~vt~~~d~~v~v~D~~tg~~~  354 (373)
T d2madh_         334 YALSAGTEVLHIYDAGAGDQD  354 (373)
T ss_pred             EEEeCCCCeEEEEECCCCCEE
Confidence            333788999999999998754


No 38 
>d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli [TaxId: 562]}
Probab=99.75  E-value=1.1e-16  Score=148.53  Aligned_cols=227  Identities=14%  Similarity=0.110  Sum_probs=154.1

Q ss_pred             EEEEE-cCCeEEEEECCCCCe-EEeEecCCCCCeEEEEEcCCCCeEEEEE-CCCcEEEEECCCCeeeEEe---cCCCccE
Q 014934          180 VLAVG-LGNCVYLWNACSSKV-TKLCDLGIDDSVCSVGWANRNTHLAVGT-SHGKVQIWDASRCKRVRTM---EGHRLRV  253 (415)
Q Consensus       180 ~la~~-~d~~V~iwd~~~~~~-~~~~~~~~~~~V~~v~~sp~g~~la~g~-~dg~V~iwd~~~~~~~~~l---~~h~~~V  253 (415)
                      +++++ .+++|++|++.+... ..+..+.+.+.|.+|+|+|||++|++++ .|+.|++|++........+   ..+...+
T Consensus         6 v~v~~~~~~~I~v~~~~~~~~l~~~~~~~~~~~v~~la~spDG~~L~v~~~~d~~i~~~~i~~~~~~~~~~~~~~~~~~p   85 (333)
T d1ri6a_           6 VYIASPESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPGSL   85 (333)
T ss_dssp             EEEEEGGGTEEEEEEECTTSCEEEEEEEECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSSCC
T ss_pred             EEEECCCCCcEEEEEEcCCCCeEEEEEEcCCCCEeEEEEeCCCCEEEEEECCCCeEEEEEEeCCCCcEEEeeecccCCCc
Confidence            44444 678999999876543 3333346778999999999999996665 4899999999765432222   2244556


Q ss_pred             EEEEee--CCEEEEEeC-CCcEEEEECCCCCcc-EEEeccccCCeEEEEEeCCCCEEEEEeC-CCcEEEEECCCCceeEE
Q 014934          254 GALAWS--SSLLSSGSR-DKSILQRDIRAQEDF-VSKLSGHKSEVCGLKWSYDNRELASGGN-DNRLFVWNQHSTQPVLK  328 (415)
Q Consensus       254 ~~l~~~--~~~l~sgs~-dg~I~iwd~~~~~~~-~~~~~~h~~~V~~l~~spdg~~lasg~~-dg~I~iwd~~~~~~~~~  328 (415)
                      ..++|+  +++|++++. ++.|.+|+....... ......+...+.++.++|+++++++++. +..|.+|+.........
T Consensus        86 ~~l~~spDg~~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~d~~~~~~~~~~~~~i~~~~~~~~~~~~~  165 (333)
T d1ri6a_          86 THISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVA  165 (333)
T ss_dssp             SEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEECCCTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEEE
T ss_pred             eEEEEcCCCCEEeecccCCCceeeeccccccceecccccCCCccceEEEeeecceeeeccccccceeeEEEeccCCccee
Confidence            778998  467777774 678899987765421 2233456667888899999998877664 45688887644211000


Q ss_pred             -----------------------------------------------------ec------cCCCcEEEEEEcCCCCcEE
Q 014934          329 -----------------------------------------------------YC------EHTAAVKAIAWSPHLHGLL  349 (415)
Q Consensus       329 -----------------------------------------------------~~------~h~~~V~~l~~sp~~~~ll  349 (415)
                                                                           ..      ........++++++++.++
T Consensus       166 ~~~~~~~~~~g~~p~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~d~~~~~  245 (333)
T d1ri6a_         166 QDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLY  245 (333)
T ss_dssp             EEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEE
T ss_pred             eeceeeeeecCCCccEEEEeccceeEEeeccccCceEEEeecccccceeeeeeeeeeecCCCccccceeEEEecccCcee
Confidence                                                                 00      0112345678888888777


Q ss_pred             EEEcCCCCCeEEEEECCCCcEEE----EeeCCCCEEEEEECCCCCeEEEEEecCCCcEEEEECC
Q 014934          350 ASGGGTADRCIRFWNTTTNTHLS----CMDTGSQVCNLVWSKNVNELVSTHGYSQNQIIVWRYP  409 (415)
Q Consensus       350 asggg~~d~~I~iwd~~t~~~~~----~~~~~~~V~~l~~s~~~~~l~s~~g~~dg~I~vw~~~  409 (415)
                      +++.  .++.+.+|++.......    ...++..+.+++|+|||++|+++ +..++.|.+|++.
T Consensus       246 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~spDGk~l~va-~~~~~~v~v~~id  306 (333)
T d1ri6a_         246 ACDR--TASLITVFSVSEDGSVLSKEGFQPTETQPRGFNVDHSGKYLIAA-GQKSHHISVYEIV  306 (333)
T ss_dssp             EEET--TTTEEEEEEECTTSCCEEEEEEEECSSSCCCEEECTTSSEEEEE-CTTTCEEEEEEEE
T ss_pred             eecc--cCCeEEEEEEcCCCCEEEEEEEeCCCCCeeEEEEeCCCCEEEEE-ECCCCeEEEEEEE
Confidence            7765  67889999886543322    22355667889999999998875 5667899999653


No 39 
>d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]}
Probab=99.71  E-value=9.3e-15  Score=133.11  Aligned_cols=203  Identities=12%  Similarity=0.069  Sum_probs=155.8

Q ss_pred             ceeEeecCC-CcEE-EEE-cCCeEEEEECCCCCeEEeEecCCCCCeEEEEEcCCCCeEEEE-ECCCcEEEEECCCCeeeE
Q 014934          169 YLNLVDWSS-HNVL-AVG-LGNCVYLWNACSSKVTKLCDLGIDDSVCSVGWANRNTHLAVG-TSHGKVQIWDASRCKRVR  244 (415)
Q Consensus       169 ~i~~l~ws~-~~~l-a~~-~d~~V~iwd~~~~~~~~~~~~~~~~~V~~v~~sp~g~~la~g-~~dg~V~iwd~~~~~~~~  244 (415)
                      ....+.|++ +..+ +++ .++.+.+|+..+++....+.  +...+.++.|+|+|..++++ ..++.+.+|+..+.+.+.
T Consensus        75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~dg~~~~~~~~~~~~~~~~~~~~~~~~~  152 (301)
T d1l0qa2          75 SPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVK--TGKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVIN  152 (301)
T ss_dssp             SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEE--CSSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEE
T ss_pred             cccccccccccccccccccccceeeecccccceeeeecc--ccccceEEEeecCCCeeeeeeccccceeeeeccccceee
Confidence            356788888 5444 444 35789999999988777764  45678999999999977655 457789999999999888


Q ss_pred             EecCCCccEEEEEee--CCEEEEEeCC-CcEEEEECCCCCccEEEeccccCCeEEEEEeCCCCEEEEEe---CCCcEEEE
Q 014934          245 TMEGHRLRVGALAWS--SSLLSSGSRD-KSILQRDIRAQEDFVSKLSGHKSEVCGLKWSYDNRELASGG---NDNRLFVW  318 (415)
Q Consensus       245 ~l~~h~~~V~~l~~~--~~~l~sgs~d-g~I~iwd~~~~~~~~~~~~~h~~~V~~l~~spdg~~lasg~---~dg~I~iw  318 (415)
                      .+..+ ..+..++++  +..+++++.+ +.+.+|+..... ...... +...+.+++|+++++.+++++   .++.|++|
T Consensus       153 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~g~~~~v~~~~~~~~~v~v~  229 (301)
T d1l0qa2         153 TVSVG-RSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNS-VIDTVK-VEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMI  229 (301)
T ss_dssp             EEECC-SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTE-EEEEEE-CSSEEEEEEECTTSSEEEEEEECSSCCEEEEE
T ss_pred             ecccC-CCceEEEeeccccceeeeccccccccccccccee-eeeccc-ccCCcceeeccccccccccccccceeeeeeee
Confidence            88754 457788887  3566666655 566677766554 344433 345678899999999887654   34689999


Q ss_pred             ECCCCceeEEeccCCCcEEEEEEcCCCCcEEEEEcCCCCCeEEEEECCCCcEEEEeeCCCC
Q 014934          319 NQHSTQPVLKYCEHTAAVKAIAWSPHLHGLLASGGGTADRCIRFWNTTTNTHLSCMDTGSQ  379 (415)
Q Consensus       319 d~~~~~~~~~~~~h~~~V~~l~~sp~~~~llasggg~~d~~I~iwd~~t~~~~~~~~~~~~  379 (415)
                      |+.+++.+..+.. ...+.+++|+|+|++++++++  .|+.|++||+.+++.+.++..+..
T Consensus       230 D~~t~~~~~~~~~-~~~~~~va~spdg~~l~va~~--~~~~i~v~D~~t~~~~~~~~vg~~  287 (301)
T d1l0qa2         230 DTGTNKITARIPV-GPDPAGIAVTPDGKKVYVALS--FCNTVSVIDTATNTITATMAVGKN  287 (301)
T ss_dssp             ETTTTEEEEEEEC-CSSEEEEEECTTSSEEEEEET--TTTEEEEEETTTTEEEEEEECSSS
T ss_pred             ecCCCeEEEEEcC-CCCEEEEEEeCCCCEEEEEEC--CCCeEEEEECCCCeEEEEEeCCCC
Confidence            9999998888754 456899999999998888886  799999999999999999876544


No 40 
>d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]}
Probab=99.71  E-value=1.5e-15  Score=142.29  Aligned_cols=242  Identities=10%  Similarity=0.029  Sum_probs=171.2

Q ss_pred             EeecCC-CcEEEEE-----------cCCeEEEEECCCCCeEEeEecCC------CCCeEEEEEcCCCCeEEEEEC--CCc
Q 014934          172 LVDWSS-HNVLAVG-----------LGNCVYLWNACSSKVTKLCDLGI------DDSVCSVGWANRNTHLAVGTS--HGK  231 (415)
Q Consensus       172 ~l~ws~-~~~la~~-----------~d~~V~iwd~~~~~~~~~~~~~~------~~~V~~v~~sp~g~~la~g~~--dg~  231 (415)
                      .++||| ++.|++.           .++.|++||..+++.........      ......++|+++|++++++..  +..
T Consensus        51 ~~a~SpDg~~l~v~~~~~~~~~~g~~d~~v~v~D~~t~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~~  130 (355)
T d2bbkh_          51 NPVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPA  130 (355)
T ss_dssp             EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCE
T ss_pred             ceEEcCCCCEEEEEeCCCccccccCCCCEEEEEECCCCCEEEEEecCCcceeecCCCCceEEEecCCCeeEEecCCCCce
Confidence            678999 6666553           25789999999999887765421      223456899999998888753  567


Q ss_pred             EEEEECCCCeeeEEecCCCccEEEEEeeCCEEEEEeCCCcEEEEECCCCCccEEE-----eccccCCeEEEEEeCCCCEE
Q 014934          232 VQIWDASRCKRVRTMEGHRLRVGALAWSSSLLSSGSRDKSILQRDIRAQEDFVSK-----LSGHKSEVCGLKWSYDNREL  306 (415)
Q Consensus       232 V~iwd~~~~~~~~~l~~h~~~V~~l~~~~~~l~sgs~dg~I~iwd~~~~~~~~~~-----~~~h~~~V~~l~~spdg~~l  306 (415)
                      +.+|+..+++.+..+..+... ......+...+..+.|+....+...........     ...+...+....+.+++..+
T Consensus       131 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~dg~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  209 (355)
T d2bbkh_         131 VGVVDLEGKAFKRMLDVPDCY-HIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGRL  209 (355)
T ss_dssp             EEEEETTTTEEEEEEECCSEE-EEEEEETTEEEEEETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETTTTEE
T ss_pred             eeeeecCCCcEeeEEecCCcc-eEeecCCcceEEEcCCCCEEEEEecCCCeEEEEecccccceecceeeeccccCCCCeE
Confidence            999999999988887754432 223333556666777877777765544322111     11233445667888899999


Q ss_pred             EEEeCCCcEEEEECCCCceeE--EeccCC----------CcEEEEEEcCCCCcEEEEEcC-------CCCCeEEEEECCC
Q 014934          307 ASGGNDNRLFVWNQHSTQPVL--KYCEHT----------AAVKAIAWSPHLHGLLASGGG-------TADRCIRFWNTTT  367 (415)
Q Consensus       307 asg~~dg~I~iwd~~~~~~~~--~~~~h~----------~~V~~l~~sp~~~~llasggg-------~~d~~I~iwd~~t  367 (415)
                      +.++.++.+++|++..++...  ....+.          .....+++++++..+++....       .....|.+||+.+
T Consensus       210 ~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~v~v~d~~t  289 (355)
T d2bbkh_         210 VWPTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKT  289 (355)
T ss_dssp             EEEBTTSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTT
T ss_pred             EEecCCCeEEEEecCCCcEEEEeccCCcccceEeeeeeccceEEEEEeCCCCeEEEEeccCCceeecCCCCeEEEEeCCC
Confidence            999999999999998775422  111111          223458899999877665431       1235799999999


Q ss_pred             CcEEEEeeCCCCEEEEEECCCCCeEEEEEecCCCcEEEEECCCCccc
Q 014934          368 NTHLSCMDTGSQVCNLVWSKNVNELVSTHGYSQNQIIVWRYPTMSKV  414 (415)
Q Consensus       368 ~~~~~~~~~~~~V~~l~~s~~~~~l~s~~g~~dg~I~vw~~~s~~~l  414 (415)
                      ++.+..+..+..+.+++|+|||+.++.+++..|+.|.|||..+++.+
T Consensus       290 ~~~~~~~~~~~~~~~~a~spDG~~~l~v~~~~d~~i~v~D~~tg~~~  336 (355)
T d2bbkh_         290 GERLAKFEMGHEIDSINVSQDEKPLLYALSTGDKTLYIHDAESGEEL  336 (355)
T ss_dssp             CCEEEEEEEEEEECEEEECCSSSCEEEEEETTTTEEEEEETTTCCEE
T ss_pred             CcEEEEecCCCCEEEEEEcCCCCeEEEEEECCCCEEEEEECCCCCEE
Confidence            99999988888899999999998543333778999999999998754


No 41 
>d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]}
Probab=99.68  E-value=4.5e-15  Score=137.18  Aligned_cols=198  Identities=14%  Similarity=0.089  Sum_probs=148.1

Q ss_pred             ceeEeecCC-CcEE-EEE-cCCeEEEEECCCCCeEEeEecCC----CCCeEEEEEcCCCCeEEEEE------------CC
Q 014934          169 YLNLVDWSS-HNVL-AVG-LGNCVYLWNACSSKVTKLCDLGI----DDSVCSVGWANRNTHLAVGT------------SH  229 (415)
Q Consensus       169 ~i~~l~ws~-~~~l-a~~-~d~~V~iwd~~~~~~~~~~~~~~----~~~V~~v~~sp~g~~la~g~------------~d  229 (415)
                      .+..++|+| ++.| +++ .++.|++||+.+++.........    ...+..++|+|++++++++.            .+
T Consensus        35 ~~~~i~~spDg~~l~v~~~~~~~v~v~D~~t~~~~~~~~~~~~~~~~~~~~~v~~s~dg~~l~~~~~~~~~~~~~~~~~~  114 (337)
T d1pbyb_          35 TPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQP  114 (337)
T ss_dssp             CCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECC
T ss_pred             CccEEEECCCCCEEEEEECCCCeEEEEECCCCcEEEEEecCCCcccccceeeEEEcCCCcEEEEeecCCcceeeeccccc
Confidence            456789999 6665 444 47899999999999887776421    12355789999999998876            35


Q ss_pred             CcEEEEECCCCeeeEEecCCCccEEEEEee--CCEEEEEeCCCcEEEEECCCCCc-------------------------
Q 014934          230 GKVQIWDASRCKRVRTMEGHRLRVGALAWS--SSLLSSGSRDKSILQRDIRAQED-------------------------  282 (415)
Q Consensus       230 g~V~iwd~~~~~~~~~l~~h~~~V~~l~~~--~~~l~sgs~dg~I~iwd~~~~~~-------------------------  282 (415)
                      +.+.+||..+++.+..+.. ...+.+++|+  +.++++++.+  +.+||......                         
T Consensus       115 ~~~~~~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~--~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  191 (337)
T d1pbyb_         115 TRVALYDAETLSRRKAFEA-PRQITMLAWARDGSKLYGLGRD--LHVMDPEAGTLVEDKPIQSWEAETYAQPDVLAVWNQ  191 (337)
T ss_dssp             CEEEEEETTTTEEEEEEEC-CSSCCCEEECTTSSCEEEESSS--EEEEETTTTEEEEEECSTTTTTTTBCCCBCCCCCCC
T ss_pred             cceeeccccCCeEEEeccc-cCCceEEEEcCCCCEEEEEcCC--cceeeeecCcEEEEeecCCccccceecCCcceeecc
Confidence            7899999999998888874 3457778887  5677777544  56677654320                         


Q ss_pred             ----------------------------------------cEEEeccccCCeEEEEEeCCCCEEEEEeCCCcEEEEECCC
Q 014934          283 ----------------------------------------FVSKLSGHKSEVCGLKWSYDNRELASGGNDNRLFVWNQHS  322 (415)
Q Consensus       283 ----------------------------------------~~~~~~~h~~~V~~l~~spdg~~lasg~~dg~I~iwd~~~  322 (415)
                                                              ....+..+...+..+.++|++.+++.+  ++.|++||+.+
T Consensus       192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~i~v~d~~~  269 (337)
T d1pbyb_         192 HESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRAFGA--YNVLESFDLEK  269 (337)
T ss_dssp             CTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECTTSSEEEEE--ESEEEEEETTT
T ss_pred             ccccceeeeeeeeeeeccceeeecccCccEEEEEcCCCcEEEEEecCCCcceEEEEecccceEEEEc--cccEEEEECCC
Confidence                                                    011122344456677788888888766  57899999999


Q ss_pred             CceeEEeccCCCcEEEEEEcCCCCcEEEEEcCCCCCeEEEEECCCCcEEEEee
Q 014934          323 TQPVLKYCEHTAAVKAIAWSPHLHGLLASGGGTADRCIRFWNTTTNTHLSCMD  375 (415)
Q Consensus       323 ~~~~~~~~~h~~~V~~l~~sp~~~~llasggg~~d~~I~iwd~~t~~~~~~~~  375 (415)
                      ++.+..+ .+...+.+++|+|+|+.+++ ++  .|+.|++||+.+++.+..+.
T Consensus       270 ~~~~~~~-~~~~~~~~~~~s~dG~~l~v-~~--~~~~i~v~D~~t~~~v~~i~  318 (337)
T d1pbyb_         270 NASIKRV-PLPHSYYSVNVSTDGSTVWL-GG--ALGDLAAYDAETLEKKGQVD  318 (337)
T ss_dssp             TEEEEEE-ECSSCCCEEEECTTSCEEEE-ES--BSSEEEEEETTTCCEEEEEE
T ss_pred             CcEEEEE-cCCCCEEEEEECCCCCEEEE-Ee--CCCcEEEEECCCCcEEEEEE
Confidence            9998887 56678899999999995555 44  79999999999999998886


No 42 
>d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa [TaxId: 287]}
Probab=99.67  E-value=3.3e-15  Score=145.00  Aligned_cols=188  Identities=13%  Similarity=0.074  Sum_probs=146.6

Q ss_pred             eEEEEECCCcEEEEECCCCeeeEEecCCCccEEEEEee--CCEEEEEeCCCcEEEEECCCCCccE----EEeccccCCeE
Q 014934          222 HLAVGTSHGKVQIWDASRCKRVRTMEGHRLRVGALAWS--SSLLSSGSRDKSILQRDIRAQEDFV----SKLSGHKSEVC  295 (415)
Q Consensus       222 ~la~g~~dg~V~iwd~~~~~~~~~l~~h~~~V~~l~~~--~~~l~sgs~dg~I~iwd~~~~~~~~----~~~~~h~~~V~  295 (415)
                      ++++...||.|+|||+.+++.+.++..|. .+..++|+  +++|++++.|++|++||+.+.+...    ....+|...+.
T Consensus        34 ~~V~~~~dg~v~vwD~~t~~~~~~l~~g~-~~~~vafSPDGk~l~~~~~d~~v~vwd~~t~~~~~~~~i~~~~~~~~~~~  112 (426)
T d1hzua2          34 FSVTLRDAGQIALVDGDSKKIVKVIDTGY-AVHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKIGIEARSVES  112 (426)
T ss_dssp             EEEEETTTTEEEEEETTTCSEEEEEECCS-SEEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEECCSEEEEEEE
T ss_pred             EEEEEcCCCEEEEEECCCCcEEEEEeCCC-CeeEEEECCCCCEEEEEeCCCCEEEEEccCCceeEEEEEeCCCCCcceEE
Confidence            45667789999999999999999999775 58999998  6899999999999999998876321    12235666677


Q ss_pred             EEEEeCCCCEEEE-EeCCCcEEEEECCCCceeEEeccCCC-----------cEEEEEEcCCCCcEEEEEcCCCCCeEEEE
Q 014934          296 GLKWSYDNRELAS-GGNDNRLFVWNQHSTQPVLKYCEHTA-----------AVKAIAWSPHLHGLLASGGGTADRCIRFW  363 (415)
Q Consensus       296 ~l~~spdg~~las-g~~dg~I~iwd~~~~~~~~~~~~h~~-----------~V~~l~~sp~~~~llasggg~~d~~I~iw  363 (415)
                      +++|+|||++|++ +..++.+.+||..++.++..+..|..           ....+++++++..++.+..  ..+.+.++
T Consensus       113 s~~~spDG~~l~v~~~~~~~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s~d~~~~~~~~~--~~~~i~~~  190 (426)
T d1hzua2         113 SKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVK--ETGKVLLV  190 (426)
T ss_dssp             CCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEET--TTTEEEEE
T ss_pred             eeeecCCCCEEEEeecCCCeEEEEcCCccceeEEeeccCCCccceeecCCCceeEEEECCCCCEEEEecC--CCCeEEEE
Confidence            7888899998755 45889999999999988877765443           3456677777776666554  46777777


Q ss_pred             ECCCCc--EEEEeeCCCCEEEEEECCCCCeEEEEEecCCCcEEEEECCCCcc
Q 014934          364 NTTTNT--HLSCMDTGSQVCNLVWSKNVNELVSTHGYSQNQIIVWRYPTMSK  413 (415)
Q Consensus       364 d~~t~~--~~~~~~~~~~V~~l~~s~~~~~l~s~~g~~dg~I~vw~~~s~~~  413 (415)
                      +...+.  .+..+.++..+..+.|+|++++++++ ...++.+.+|+..+++.
T Consensus       191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~a-~~~~~~~~~~~~~~~~~  241 (426)
T d1hzua2         191 NYKDIDNLTVTSIGAAPFLADGGWDSSHRYFMTA-ANNSNKVAVIDSKDRRL  241 (426)
T ss_dssp             ECSSSSSCEEEEEECCSSEEEEEECTTSCEEEEE-ETTCSEEEEEETTTTEE
T ss_pred             EeccccceeeEEeccCCccEeeeECCCCcEEEee-eecccceeeeecccccE
Confidence            776655  34455678889999999999999886 45778899999887754


No 43 
>d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]}
Probab=99.60  E-value=1.8e-14  Score=136.69  Aligned_cols=241  Identities=8%  Similarity=-0.009  Sum_probs=168.3

Q ss_pred             eEeecCC-CcEEEEEc-----------CCeEEEEECCCCCeEEeEecCCC------CCeEEEEEcCCCCeEEEEE-CCCc
Q 014934          171 NLVDWSS-HNVLAVGL-----------GNCVYLWNACSSKVTKLCDLGID------DSVCSVGWANRNTHLAVGT-SHGK  231 (415)
Q Consensus       171 ~~l~ws~-~~~la~~~-----------d~~V~iwd~~~~~~~~~~~~~~~------~~V~~v~~sp~g~~la~g~-~dg~  231 (415)
                      ..+.|+| +..|++..           ++.|.+||..+++....+.....      .....++|+|||++|+++. .++.
T Consensus        68 ~~~a~spDg~~i~~~~~~~~~~~~g~~d~~v~v~D~~t~~~~~~i~~p~~~~~~~g~~p~~~a~SpDGk~l~va~~~~~~  147 (368)
T d1mdah_          68 SLAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSA  147 (368)
T ss_dssp             CEEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSSSC
T ss_pred             CcceECCCCCEEEEEcccCccccccccCCeEEEEECCCCcEeeeecCCccceecccCCccceEECCCCCEEEEEeCCCCe
Confidence            3578999 67777653           45699999999998877754221      2234689999999998886 5789


Q ss_pred             EEEEECCCCeeeEEecCCCccEEEEEeeCCEEEEEeCCCcEEEEECCCCCccEEE-----eccccCCeEEEEEeCCCCEE
Q 014934          232 VQIWDASRCKRVRTMEGHRLRVGALAWSSSLLSSGSRDKSILQRDIRAQEDFVSK-----LSGHKSEVCGLKWSYDNREL  306 (415)
Q Consensus       232 V~iwd~~~~~~~~~l~~h~~~V~~l~~~~~~l~sgs~dg~I~iwd~~~~~~~~~~-----~~~h~~~V~~l~~spdg~~l  306 (415)
                      |.+||+.+++.+..+..+..... .......++..+.||.+.++++.........     ...+...+....+.+++..+
T Consensus       148 v~~~d~~~~~~~~~~~~~~~~~~-~~~~~~~~v~~~~Dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~  226 (368)
T d1mdah_         148 AAGLSVPGASDDQLTKSASCFHI-HPGAAATHYLGSCPASLAASDLAAAPAAAGIVGAQCTGAQNCSSQAAQANYPGMLV  226 (368)
T ss_dssp             EEEEEETTTEEEEEEECSSCCCC-EEEETTEEECCCCTTSCEEEECCSSCCCCEECCCCSCTTSCBCSCCEEETTTTEEE
T ss_pred             EEEEECCCCcEeEEeeccCcceE-ccCCCceEEEEcCCCCEEEEEecCCceeeeeeecccccccccceeecccccCcEEE
Confidence            99999999998888765543211 1122567888899999999998766532221     22344556677888888766


Q ss_pred             EEEeCCCcEEEEECCCCceeEEec--cC----------CCcEEEEEEcCCCCcEEEEEcC------CCCCeEEEEECCCC
Q 014934          307 ASGGNDNRLFVWNQHSTQPVLKYC--EH----------TAAVKAIAWSPHLHGLLASGGG------TADRCIRFWNTTTN  368 (415)
Q Consensus       307 asg~~dg~I~iwd~~~~~~~~~~~--~h----------~~~V~~l~~sp~~~~llasggg------~~d~~I~iwd~~t~  368 (415)
                      .+.  .+.+++++...........  .+          ......++++|++..+++...+      .....|.+||..++
T Consensus       227 ~~~--~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~a~~~~~~~~~v~~~~~~~~~~~~~~~v~v~D~~t~  304 (368)
T d1mdah_         227 WAV--ASSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVG  304 (368)
T ss_dssp             ECB--SSCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSC
T ss_pred             Eec--CCCEEEEeecCCceEEEeecccccceeeeeeecCCCceeEEEcCCCCEEEEEecCCCceeecCCceEEEEECCCC
Confidence            654  4557777776554433221  11          1122357889998877665421      01246999999999


Q ss_pred             cEEEEeeCCCCEEEEEECCCCCeEEEEEecCCCcEEEEECCCCccc
Q 014934          369 THLSCMDTGSQVCNLVWSKNVNELVSTHGYSQNQIIVWRYPTMSKV  414 (415)
Q Consensus       369 ~~~~~~~~~~~V~~l~~s~~~~~l~s~~g~~dg~I~vw~~~s~~~l  414 (415)
                      +.+..+..+..+..++|+|||+.++...+..++.|.|||..+++.+
T Consensus       305 ~~~~~~~~~~~~~~~a~spDG~~~ly~s~~~~~~v~v~D~~tgk~~  350 (368)
T d1mdah_         305 QTSGPISNGHDSDAIIAAQDGASDNYANSAGTEVLDIYDAASDQDQ  350 (368)
T ss_dssp             CEEECCEEEEEECEEEECCSSSCEEEEEETTTTEEEEEESSSCEEE
T ss_pred             cEeEEecCCCceeEEEECCCCCEEEEEEeCCCCeEEEEECCCCCEE
Confidence            9999888888899999999998543333678899999999988754


No 44 
>d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]}
Probab=99.56  E-value=2.8e-13  Score=125.34  Aligned_cols=205  Identities=12%  Similarity=0.053  Sum_probs=140.7

Q ss_pred             CcceeEeecCC-CcEEEE-E-cCCeEEEEECCCCCeEEeEecCCC-----CCeEEEEEcCCCCeEEEEE-----------
Q 014934          167 DFYLNLVDWSS-HNVLAV-G-LGNCVYLWNACSSKVTKLCDLGID-----DSVCSVGWANRNTHLAVGT-----------  227 (415)
Q Consensus       167 ~~~i~~l~ws~-~~~la~-~-~d~~V~iwd~~~~~~~~~~~~~~~-----~~V~~v~~sp~g~~la~g~-----------  227 (415)
                      ...+..++|+| ++.+.+ + .++.|++||+.+++..........     ..+..++|+|||++++++.           
T Consensus        39 ~~~p~~l~~spDG~~l~v~~~~~~~v~~~d~~t~~~~~~~~~~~~~~~~~~~~~~v~~s~DG~~l~v~~~~~~~~~~~~~  118 (346)
T d1jmxb_          39 KFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYV  118 (346)
T ss_dssp             CCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEE
T ss_pred             CCCcceEEECCCCCEEEEEECCCCcEEEEeCccCeeeeeecccccccccCCceEEEEEecCCCEEEEEecCCcceeeeec
Confidence            34467899999 566544 4 468999999999988877654321     2356789999999887765           


Q ss_pred             -CCCcEEEEECCCCeeeEEecCC--CccE-----------------------------EEE---------Eee-------
Q 014934          228 -SHGKVQIWDASRCKRVRTMEGH--RLRV-----------------------------GAL---------AWS-------  259 (415)
Q Consensus       228 -~dg~V~iwd~~~~~~~~~l~~h--~~~V-----------------------------~~l---------~~~-------  259 (415)
                       .++.+.+||..+++....+..+  ...+                             ..+         .++       
T Consensus       119 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  198 (346)
T d1jmxb_         119 VKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADDGSLYVAGPDIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFW  198 (346)
T ss_dssp             ECCCEEEEEEGGGGGGBCCSEEEECCSSCCCEEECTTSCEEEESSSEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCC
T ss_pred             cCcceEEEEecccceeeeEEEeeeccCceEEEEecCCCEEEEeCCcceEEEccCCCEEEEEecCCCccceEEeccccEEE
Confidence             3566778876554322111100  0000                             000         000       


Q ss_pred             ---------------------CCEEEEEeCCCcEEEEECCCCCccEEEeccccCCeEEEEEeCCCCEEEEEeCCCcEEEE
Q 014934          260 ---------------------SSLLSSGSRDKSILQRDIRAQEDFVSKLSGHKSEVCGLKWSYDNRELASGGNDNRLFVW  318 (415)
Q Consensus       260 ---------------------~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~spdg~~lasg~~dg~I~iw  318 (415)
                                           ...+.++..++.+.+||.............|...+..+.+++++.+++.+.. +.|.+|
T Consensus       199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~v~  277 (346)
T d1jmxb_         199 PHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGVL-NRLAKY  277 (346)
T ss_dssp             CCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECSSCTTEEEEEE-SEEEEE
T ss_pred             EEecCCCceEeeeeeeeeccCceeEeeccCCceEEEEECCCCceEEEEeecccceeEEEEEeCCCCEEEEecC-CeEEEE
Confidence                                 0011222334457777877776545556678888999999999888887664 579999


Q ss_pred             ECCCCceeEEeccCCCcEEEEEEcCCCCcEEEEEcCCCCCeEEEEECCCCcEEEEeeC
Q 014934          319 NQHSTQPVLKYCEHTAAVKAIAWSPHLHGLLASGGGTADRCIRFWNTTTNTHLSCMDT  376 (415)
Q Consensus       319 d~~~~~~~~~~~~h~~~V~~l~~sp~~~~llasggg~~d~~I~iwd~~t~~~~~~~~~  376 (415)
                      |..+++.+..+. +...+.+++|+|+|+.+++ ++  .|+.|++||+.+++.+..++.
T Consensus       278 d~~~~~~~~~~~-~~~~~~~va~s~DG~~l~v-~~--~d~~v~v~D~~t~~~i~~i~~  331 (346)
T d1jmxb_         278 DLKQRKLIKAAN-LDHTYYCVAFDKKGDKLYL-GG--TFNDLAVFNPDTLEKVKNIKL  331 (346)
T ss_dssp             ETTTTEEEEEEE-CSSCCCEEEECSSSSCEEE-ES--BSSEEEEEETTTTEEEEEEEC
T ss_pred             ECCCCcEEEEEc-CCCCEEEEEEcCCCCEEEE-Ee--CCCcEEEEECccCCEEEEEEC
Confidence            999999888774 5567999999999986655 44  799999999999999999874


No 45 
>d2madh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]}
Probab=99.54  E-value=3.6e-12  Score=119.88  Aligned_cols=173  Identities=10%  Similarity=-0.024  Sum_probs=114.7

Q ss_pred             EEEEEcCCCCeE-EEEECCCcEEEEECCCCeeeEEecCC------CccEEEEEeeC-CEEEEEeCCCcEEEEECCCCCcc
Q 014934          212 CSVGWANRNTHL-AVGTSHGKVQIWDASRCKRVRTMEGH------RLRVGALAWSS-SLLSSGSRDKSILQRDIRAQEDF  283 (415)
Q Consensus       212 ~~v~~sp~g~~l-a~g~~dg~V~iwd~~~~~~~~~l~~h------~~~V~~l~~~~-~~l~sgs~dg~I~iwd~~~~~~~  283 (415)
                      .++.++++|+.+ ++++.||.+.+|+...++.......+      ......+.+.+ ..++..+.++.+.+|+.......
T Consensus       168 ~~~~~s~~g~~~~v~~~~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~  247 (373)
T d2madh_         168 TCYHIHPGAPSTFYLLCAQGGLAKTDHAGGAAGAGLVGAMLTAAQNLLTQPAQANKSGRIVWPVYSGKILQADISAAGAT  247 (373)
T ss_pred             eeEEEecCCCcEEEEEcCCCeEEEEEcCCceeeEEEeeeccccCccceeeeEEECCCceEEEecCCceEEEEEcCCCeEE
Confidence            455566666543 45666777777777766655544322      12223334443 45666678888888888765421


Q ss_pred             -EEEeccc----------cCCeEEEEEeCCCCEEE----------EEeCCCcEEEEECCCCceeEEeccCCCcEEEEEEc
Q 014934          284 -VSKLSGH----------KSEVCGLKWSYDNRELA----------SGGNDNRLFVWNQHSTQPVLKYCEHTAAVKAIAWS  342 (415)
Q Consensus       284 -~~~~~~h----------~~~V~~l~~spdg~~la----------sg~~dg~I~iwd~~~~~~~~~~~~h~~~V~~l~~s  342 (415)
                       ......+          ......+++++++..++          +...++.+.+||..+++.+..+ .+...+.+++|+
T Consensus       248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~v~~~d~~t~~~~~~~-~~~~~~~~~a~s  326 (373)
T d2madh_         248 NKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQI-SLGHDVDAISVA  326 (373)
T ss_pred             EEEeeccccCcEEeeeeccCcceeeEEecCCCeEEEecCCCceEEeecCCCeEEEEECCCCcEEEEe-cCCCCeeEEEEC
Confidence             1111111          12234456666665543          4556778999999999998887 567789999999


Q ss_pred             CCCCcE-EEEEcCCCCCeEEEEECCCCcEEEEee-CCCCEEEEEECC
Q 014934          343 PHLHGL-LASGGGTADRCIRFWNTTTNTHLSCMD-TGSQVCNLVWSK  387 (415)
Q Consensus       343 p~~~~l-lasggg~~d~~I~iwd~~t~~~~~~~~-~~~~V~~l~~s~  387 (415)
                      |+|+.+ +++++  .|+.|++||+.+++.+..+. ++.....+++..
T Consensus       327 pDG~~~l~vt~~--~d~~v~v~D~~tg~~~~~~~~~g~~P~~l~~~~  371 (373)
T d2madh_         327 QDGGPDLYALSA--GTEVLHIYDAGAGDQDQSTVELGSGPQVLSVMN  371 (373)
T ss_pred             CCCCEEEEEEeC--CCCeEEEEECCCCCEEEEECCCCCCCcEEEEec
Confidence            999875 45665  79999999999999999997 566666666544


No 46 
>d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli [TaxId: 562]}
Probab=99.47  E-value=2.3e-12  Score=118.75  Aligned_cols=187  Identities=12%  Similarity=0.123  Sum_probs=136.1

Q ss_pred             eEEEEECCCcEEEEECCCCeeeEEe--cCCCccEEEEEeeC--CEEEE-EeCCCcEEEEECCCCCccEE--EeccccCCe
Q 014934          222 HLAVGTSHGKVQIWDASRCKRVRTM--EGHRLRVGALAWSS--SLLSS-GSRDKSILQRDIRAQEDFVS--KLSGHKSEV  294 (415)
Q Consensus       222 ~la~g~~dg~V~iwd~~~~~~~~~l--~~h~~~V~~l~~~~--~~l~s-gs~dg~I~iwd~~~~~~~~~--~~~~h~~~V  294 (415)
                      .++++..+++|++|++.....+..+  ..|.+.+..|+|++  ++|++ +..|+.|.+|++........  ....+...+
T Consensus         6 v~v~~~~~~~I~v~~~~~~~~l~~~~~~~~~~~v~~la~spDG~~L~v~~~~d~~i~~~~i~~~~~~~~~~~~~~~~~~p   85 (333)
T d1ri6a_           6 VYIASPESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPGSL   85 (333)
T ss_dssp             EEEEEGGGTEEEEEEECTTSCEEEEEEEECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSSCC
T ss_pred             EEEECCCCCcEEEEEEcCCCCeEEEEEEcCCCCEeEEEEeCCCCEEEEEECCCCeEEEEEEeCCCCcEEEeeecccCCCc
Confidence            3466778999999999765433222  25788899999994  67755 45589999999986653222  222345668


Q ss_pred             EEEEEeCCCCEEEEEeC-CCcEEEEECCCCceeE--EeccCCCcEEEEEEcCCCCcEEEEEcCCCCCeEEEEECCCCcEE
Q 014934          295 CGLKWSYDNRELASGGN-DNRLFVWNQHSTQPVL--KYCEHTAAVKAIAWSPHLHGLLASGGGTADRCIRFWNTTTNTHL  371 (415)
Q Consensus       295 ~~l~~spdg~~lasg~~-dg~I~iwd~~~~~~~~--~~~~h~~~V~~l~~sp~~~~llasggg~~d~~I~iwd~~t~~~~  371 (415)
                      ++++|+|||++|++++. ++.|.+|+........  ....+...+.++.++|+++.+++...  .+..|.+|+..+....
T Consensus        86 ~~l~~spDg~~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~d~~~~~~~~~--~~~~i~~~~~~~~~~~  163 (333)
T d1ri6a_          86 THISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGLDGCHSANISPDNRTLWVPAL--KQDRICLFTVSDDGHL  163 (333)
T ss_dssp             SEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEECCCTTBCCCEECTTSSEEEEEEG--GGTEEEEEEECTTSCE
T ss_pred             eEEEEcCCCCEEeecccCCCceeeeccccccceecccccCCCccceEEEeeecceeeecccc--ccceeeEEEeccCCcc
Confidence            89999999999998875 6689999887665433  33456777889999999997777765  6788999998775433


Q ss_pred             EE-------eeCCCCEEEEEECCCCCeEEEEEecCCCcEEEEECCCC
Q 014934          372 SC-------MDTGSQVCNLVWSKNVNELVSTHGYSQNQIIVWRYPTM  411 (415)
Q Consensus       372 ~~-------~~~~~~V~~l~~s~~~~~l~s~~g~~dg~I~vw~~~s~  411 (415)
                      ..       ...+.....++|++++..++.+ ....+...+|++...
T Consensus       164 ~~~~~~~~~~~~g~~p~~i~~~~~~~~~~~~-~~~~~~~~v~~~~~~  209 (333)
T d1ri6a_         164 VAQDPAEVTTVEGAGPRHMVFHPNEQYAYCV-NELNSSVDVWELKDP  209 (333)
T ss_dssp             EEEEEEEEECSTTCCEEEEEECTTSSEEEEE-ETTTTEEEEEESSCT
T ss_pred             eeeeceeeeeecCCCccEEEEeccceeEEee-ccccCceEEEeeccc
Confidence            22       1245678899999999988775 456778888887543


No 47 
>d2bgra1 b.70.3.1 (A:39-508) Dipeptidyl peptidase IV/CD26, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}
Probab=99.39  E-value=3.4e-11  Score=117.47  Aligned_cols=137  Identities=15%  Similarity=0.104  Sum_probs=102.5

Q ss_pred             EeecCCCcEEEEEcCCeEEEEECCCCCeEEeEec----CCCCCeEEEEEcCCCCeEEEEEC---------CCcEEEEECC
Q 014934          172 LVDWSSHNVLAVGLGNCVYLWNACSSKVTKLCDL----GIDDSVCSVGWANRNTHLAVGTS---------HGKVQIWDAS  238 (415)
Q Consensus       172 ~l~ws~~~~la~~~d~~V~iwd~~~~~~~~~~~~----~~~~~V~~v~~sp~g~~la~g~~---------dg~V~iwd~~  238 (415)
                      .+.|.++.-+..-.++.|++||+.+++...++..    .+...|.++.|||||++|+.++.         +|.+.|||+.
T Consensus        21 ~~~W~~d~~~~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~i~~~~~SpDg~~i~~~~~~~~~~r~s~~~~~~l~d~~  100 (470)
T d2bgra1          21 SLRWISDHEYLYKQENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLN  100 (470)
T ss_dssp             CCEECSSSEEEEESSSCEEEEETTTCCEEEEECTTTTTTSSSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETT
T ss_pred             CCEeCCCCEEEEEcCCcEEEEECCCCCEEEEEchhhhhhccCccceeEECCCCCEEEEEECCcceeeeccCceEEEEECC
Confidence            3568884444455688999999999998776642    23467999999999999998853         5678999999


Q ss_pred             CCeeeEEecCCCccEEEEEee--CCEEEEEeCCCcEEEEECCCCCccEEEecc------------------ccCCeEEEE
Q 014934          239 RCKRVRTMEGHRLRVGALAWS--SSLLSSGSRDKSILQRDIRAQEDFVSKLSG------------------HKSEVCGLK  298 (415)
Q Consensus       239 ~~~~~~~l~~h~~~V~~l~~~--~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~------------------h~~~V~~l~  298 (415)
                      +++. ..+..|...+..+.|+  ++.++.. .++.+++|+...+.. ......                  ..+...++.
T Consensus       101 ~~~~-~~l~~~~~~~~~~~~SPDG~~ia~~-~~~~l~~~~~~~g~~-~~~t~~~~~~~~~~g~~d~~~~~~~~~~~~~~~  177 (470)
T d2bgra1         101 KRQL-ITEERIPNNTQWVTWSPVGHKLAYV-WNNDIYVKIEPNLPS-YRITWTGKEDIIYNGITDWVYEEEVFSAYSALW  177 (470)
T ss_dssp             TTEE-CCSSCCCTTEEEEEECSSTTCEEEE-ETTEEEEESSTTSCC-EECCSCCBTTTEEESBCCHHHHHHTSSSSBCEE
T ss_pred             CCcc-cccccCCccccccccccCcceeeEe-ecccceEEECCCCce-eeeeeccCCCcccccccceeeeeeecCCccccE
Confidence            8774 4578889999999999  4667764 567899999987763 222211                  122345688


Q ss_pred             EeCCCCEEEEEeC
Q 014934          299 WSYDNRELASGGN  311 (415)
Q Consensus       299 ~spdg~~lasg~~  311 (415)
                      |||||++||....
T Consensus       178 wSPDGk~ia~~~~  190 (470)
T d2bgra1         178 WSPNGTFLAYAQF  190 (470)
T ss_dssp             ECTTSSEEEEEEE
T ss_pred             ECCCCCccceeEe
Confidence            9999999998654


No 48 
>d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]}
Probab=99.32  E-value=1.8e-10  Score=106.86  Aligned_cols=209  Identities=10%  Similarity=0.047  Sum_probs=136.5

Q ss_pred             eeEeecCC-CcEEEEE---cCCeEEEEECCCCCeEEeEecCCC------CCeEEEEEcCCCCeEEEEE-CCCcEEEEECC
Q 014934          170 LNLVDWSS-HNVLAVG---LGNCVYLWNACSSKVTKLCDLGID------DSVCSVGWANRNTHLAVGT-SHGKVQIWDAS  238 (415)
Q Consensus       170 i~~l~ws~-~~~la~~---~d~~V~iwd~~~~~~~~~~~~~~~------~~V~~v~~sp~g~~la~g~-~dg~V~iwd~~  238 (415)
                      ...+.|++ ++.+.+.   .+..+++|+..+++....+.....      .....+.++++|+.+++.. .++.+.+++..
T Consensus       108 ~~~~~~s~dg~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~v~~~~~~~~~~~~~~  187 (355)
T d2bbkh_         108 PWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPDCYHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTE  187 (355)
T ss_dssp             GGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSEEEEEEEETTEEEEEETTSCEEEEECCSSSCCEEEECC
T ss_pred             CceEEEecCCCeeEEecCCCCceeeeeecCCCcEeeEEecCCcceEeecCCcceEEEcCCCCEEEEEecCCCeEEEEecc
Confidence            34578888 6655554   246899999999988777653221      1223455566665554432 23344444443


Q ss_pred             CCeeeEEecCCCccEEEEEee--CCEEEEEeCCCcEEEEECCCCCccE-EEeccc----------cCCeEEEEEeCCCCE
Q 014934          239 RCKRVRTMEGHRLRVGALAWS--SSLLSSGSRDKSILQRDIRAQEDFV-SKLSGH----------KSEVCGLKWSYDNRE  305 (415)
Q Consensus       239 ~~~~~~~l~~h~~~V~~l~~~--~~~l~sgs~dg~I~iwd~~~~~~~~-~~~~~h----------~~~V~~l~~spdg~~  305 (415)
                      ....     .+...+....+.  +..++.++.++.+++|++..+.... .....+          ......+++++++..
T Consensus       188 ~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~d~~~  262 (355)
T d2bbkh_         188 VFHP-----EDEFLINHPAYSQKAGRLVWPTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDR  262 (355)
T ss_dssp             CCSC-----TTSCBCSCCEEETTTTEEEEEBTTSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTE
T ss_pred             cccc-----eecceeeeccccCCCCeEEEecCCCeEEEEecCCCcEEEEeccCCcccceEeeeeeccceEEEEEeCCCCe
Confidence            3221     233334444555  5788889999999999998765211 111111          122345889999998


Q ss_pred             EEEEeCC----------CcEEEEECCCCceeEEeccCCCcEEEEEEcCCCCcE-EEEEcCCCCCeEEEEECCCCcEEEEe
Q 014934          306 LASGGND----------NRLFVWNQHSTQPVLKYCEHTAAVKAIAWSPHLHGL-LASGGGTADRCIRFWNTTTNTHLSCM  374 (415)
Q Consensus       306 lasg~~d----------g~I~iwd~~~~~~~~~~~~h~~~V~~l~~sp~~~~l-lasggg~~d~~I~iwd~~t~~~~~~~  374 (415)
                      ++....+          +.|.+||..+++.+..+. +...+.+++|+|+|+.+ +++++  .|+.|++||+.+++.+.++
T Consensus       263 ~~~~~~~~~~~~~~~~~~~v~v~d~~t~~~~~~~~-~~~~~~~~a~spDG~~~l~v~~~--~d~~i~v~D~~tg~~~~~i  339 (355)
T d2bbkh_         263 IYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFE-MGHEIDSINVSQDEKPLLYALST--GDKTLYIHDAESGEELRSV  339 (355)
T ss_dssp             EEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEE-EEEEECEEEECCSSSCEEEEEET--TTTEEEEEETTTCCEEEEE
T ss_pred             EEEEeccCCceeecCCCCeEEEEeCCCCcEEEEec-CCCCEEEEEEcCCCCeEEEEEEC--CCCEEEEEECCCCCEEEEE
Confidence            8775443          369999999999888874 44568899999999864 55655  7999999999999999998


Q ss_pred             e-CCCCEEEEEEC
Q 014934          375 D-TGSQVCNLVWS  386 (415)
Q Consensus       375 ~-~~~~V~~l~~s  386 (415)
                      . .+.....+.+.
T Consensus       340 ~~~G~~p~~i~~~  352 (355)
T d2bbkh_         340 NQLGHGPQVITTA  352 (355)
T ss_dssp             CCCCSSCCEEECC
T ss_pred             eCcCCCccEEEeC
Confidence            6 34433444433


No 49 
>d1qnia2 b.69.3.1 (A:10-450) Nitrous oxide reductase, N-terminal domain {Pseudomonas nautica [TaxId: 2743]}
Probab=99.22  E-value=7.7e-10  Score=106.12  Aligned_cols=218  Identities=8%  Similarity=-0.008  Sum_probs=151.0

Q ss_pred             cCCeEEEEECCCCCeEEeEecC-----------------------------CCCCeEEEEEcCCCCeEEEEE-CCCcEEE
Q 014934          185 LGNCVYLWNACSSKVTKLCDLG-----------------------------IDDSVCSVGWANRNTHLAVGT-SHGKVQI  234 (415)
Q Consensus       185 ~d~~V~iwd~~~~~~~~~~~~~-----------------------------~~~~V~~v~~sp~g~~la~g~-~dg~V~i  234 (415)
                      .+|.|.+|++.+++..+.+..-                             |.........+|||++|++.. .++.|.+
T Consensus        19 ~sG~V~V~dlpS~r~l~~IpVfspd~~~g~g~~~es~~vl~~~~~~~~gd~hhP~~s~t~gtpDGr~lfV~d~~~~rVav   98 (441)
T d1qnia2          19 HQGEVRVLGVPSMRELMRIPVFNVDSATGWGITNESKEILGGDQQYLNGDCHHPHISMTDGRYDGKYLFINDKANTRVAR   98 (441)
T ss_dssp             TTCCEEEEEETTTEEEEEECSSSBCTTTCTTTSHHHHHHHCSSSCCSCCCBCCCEEEEETTEEEEEEEEEEETTTTEEEE
T ss_pred             CCCcEEEEeCCCCcEEEEEEeEcCCCCEEEEECCccceEEecccccccCcccCCCcceecccCCCCEEEEEcCCCCEEEE
Confidence            5789999999988876665320                             112344455678999987765 6788999


Q ss_pred             EECCCCeeeEEec-CCCccEEEEEee--CC--EEEEEeCCC-----------------cEEEEECCCCCccEEEeccccC
Q 014934          235 WDASRCKRVRTME-GHRLRVGALAWS--SS--LLSSGSRDK-----------------SILQRDIRAQEDFVSKLSGHKS  292 (415)
Q Consensus       235 wd~~~~~~~~~l~-~h~~~V~~l~~~--~~--~l~sgs~dg-----------------~I~iwd~~~~~~~~~~~~~h~~  292 (415)
                      +|+.+++....+. .+...+..++++  ++  +++..+.+.                 .+..+|..+... ...+.. .+
T Consensus        99 IDl~t~k~~~ii~iP~g~gphgi~~spdg~t~YV~~~~~~~v~~~~dg~~~~~~~~~~~~~~iD~~t~~v-~~qI~v-~~  176 (441)
T d1qnia2          99 IRLDIMKTDKITHIPNVQAIHGLRLQKVPKTNYVFCNAEFVIPQPNDGTDFSLDNSYTMFTAIDAETMDV-AWQVIV-DG  176 (441)
T ss_dssp             EETTTTEEEEEEECTTCCCEEEEEECCSSBCCEEEEEECSCEESSCSSSCCCGGGEEEEEEEEETTTCSE-EEEEEE-SS
T ss_pred             EECCCCcEeeEEecCCCCCccceEEeccCCEEEEEeccCCcccccCcccccccccccceEEeecCcccee-eEEEec-CC
Confidence            9999998877665 356778889997  44  555555443                 234577777663 333332 34


Q ss_pred             CeEEEEEeCCCCEEEEEeCC-----------------------------------------CcEEEEECCCCceeEEecc
Q 014934          293 EVCGLKWSYDNRELASGGND-----------------------------------------NRLFVWNQHSTQPVLKYCE  331 (415)
Q Consensus       293 ~V~~l~~spdg~~lasg~~d-----------------------------------------g~I~iwd~~~~~~~~~~~~  331 (415)
                      ....+.|+|+|+++++.+.+                                         +.+.|++....+.+..+..
T Consensus       177 ~p~~v~~spdGk~a~vt~~nse~~~~id~~t~~~~d~i~v~n~p~~~~~~~dGk~~~v~~~~v~vvd~~~~~~v~~~IPv  256 (441)
T d1qnia2         177 NLDNTDADYTGKYATSTCYNSERAVDLAGTMRNDRDWVVVFNVERIAAAVKAGNFKTIGDSKVPVVDGRGESEFTRYIPV  256 (441)
T ss_dssp             CCCCEEECSSSSEEEEEESCTTCCSSHHHHTCSSBCEEEEEEHHHHHHHHHTTCCBCCTTCCCCEEECSSSCSSEEEECC
T ss_pred             CccceEECCCCCEEEEEecCCCceEEEeccCcceEEEEEeCCccceEEEecCCCEEEeCCCCcEEEEcccCCceEEEEeC
Confidence            57889999999998877643                                         3344444444555556654


Q ss_pred             CCCcEEEEEEcCCCCcEEEEEcCCCCCeEEEEECCCCcE------------EEEeeCCCCEEEEEECCCCCeEEEEEecC
Q 014934          332 HTAAVKAIAWSPHLHGLLASGGGTADRCIRFWNTTTNTH------------LSCMDTGSQVCNLVWSKNVNELVSTHGYS  399 (415)
Q Consensus       332 h~~~V~~l~~sp~~~~llasggg~~d~~I~iwd~~t~~~------------~~~~~~~~~V~~l~~s~~~~~l~s~~g~~  399 (415)
                      .. ....++++|+|+++++++.  .+++|.+||+.+.+.            ....+.+-.....+|+++|+.+.+  .+.
T Consensus       257 gk-sPhGv~vSPDGkyl~~~~~--~~~tvsv~d~~k~~~~~~~~~~~~~~~~~~~~~glgplh~~fd~~g~~yts--~~~  331 (441)
T d1qnia2         257 PK-NPHGLNTSPDGKYFIANGK--LSPTVSVIAIDKLDDLFEDKIELRDTIVAEPELGLGPLHTTFDGRGNAYTT--LFI  331 (441)
T ss_dssp             BS-SCCCEEECTTSCEEEEECT--TSSBEEEEEGGGHHHHTTTSSCGGGGEEECCBCCSCEEEEEECSSSEEEEE--ETT
T ss_pred             CC-CccCceECCCCCEEEEeCC--cCCcEEEEEeehhhhHhhccCCcceEEEeecccccCcccceecCCceEEEc--ccc
Confidence            43 3577999999998888887  899999999875221            122223444677899999976655  788


Q ss_pred             CCcEEEEECC
Q 014934          400 QNQIIVWRYP  409 (415)
Q Consensus       400 dg~I~vw~~~  409 (415)
                      |.+|..|++.
T Consensus       332 ds~v~kw~~~  341 (441)
T d1qnia2         332 DSQVCKWNIA  341 (441)
T ss_dssp             TTEEEEEEHH
T ss_pred             cceEEEeccc
Confidence            9999999974


No 50 
>d2hqsa1 b.68.4.1 (A:163-431) TolB, C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=99.18  E-value=1.4e-08  Score=90.49  Aligned_cols=212  Identities=13%  Similarity=0.123  Sum_probs=139.0

Q ss_pred             eeEeecCC-CcEEEEEcC----CeEEEEECCCCCeEEeEecCCCCCeEEEEEcCCCCeEEEEEC-CCcEEEE--ECCCCe
Q 014934          170 LNLVDWSS-HNVLAVGLG----NCVYLWNACSSKVTKLCDLGIDDSVCSVGWANRNTHLAVGTS-HGKVQIW--DASRCK  241 (415)
Q Consensus       170 i~~l~ws~-~~~la~~~d----~~V~iwd~~~~~~~~~~~~~~~~~V~~v~~sp~g~~la~g~~-dg~V~iw--d~~~~~  241 (415)
                      +...+||| ++.||...+    ..+++.+..++....+.  .+.+......|+|+|+.++.... ++...++  ......
T Consensus        41 ~~sP~wSPDGk~IAf~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~spdg~~i~~~~~~~~~~~~~~~~~~~~~  118 (269)
T d2hqsa1          41 LMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQVA--SFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQ  118 (269)
T ss_dssp             EEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEEEE--CCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCC
T ss_pred             eeeeEECCCCCEEEEEEeeccCcceeeeecccCceeEEe--eeecccccceecCCCCeeeEeeecCCccceeeccccccc
Confidence            45678999 888887632    36888888888776655  45678899999999998887654 3333333  333333


Q ss_pred             eeEEecCCCccEEEEEee--C-CEEEEEeCCCc--EEEEECCCCCccEEEeccccCCeEEEEEeCCCCEEEEEeCCC---
Q 014934          242 RVRTMEGHRLRVGALAWS--S-SLLSSGSRDKS--ILQRDIRAQEDFVSKLSGHKSEVCGLKWSYDNRELASGGNDN---  313 (415)
Q Consensus       242 ~~~~l~~h~~~V~~l~~~--~-~~l~sgs~dg~--I~iwd~~~~~~~~~~~~~h~~~V~~l~~spdg~~lasg~~dg---  313 (415)
                      ... ............+.  + ..+++...+|.  |...++....  ...+..+........|+|+++.++..+.++   
T Consensus       119 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~~~~~~~--~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~  195 (269)
T d2hqsa1         119 IRQ-VTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGA--PQRITWEGSQNQDADVSSDGKFMVMVSSNGGQQ  195 (269)
T ss_dssp             EEE-CCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSC--CEECCCSSSEEEEEEECTTSSEEEEEEECSSCE
T ss_pred             cee-eeeccccccccccccccccceecccccCCceEeeeeccccc--ceeeecccccccccccccccceeEEEeecCCce
Confidence            222 22233333333444  3 35555556665  4555555543  344555666778889999999988866544   


Q ss_pred             cEEEEECCCCceeEEeccCCCcEEEEEEcCCCCcEEEEEcCCCCCeEEEEECCCCcEEEEeeCCCCEEEEEECCC
Q 014934          314 RLFVWNQHSTQPVLKYCEHTAAVKAIAWSPHLHGLLASGGGTADRCIRFWNTTTNTHLSCMDTGSQVCNLVWSKN  388 (415)
Q Consensus       314 ~I~iwd~~~~~~~~~~~~h~~~V~~l~~sp~~~~llasggg~~d~~I~iwd~~t~~~~~~~~~~~~V~~l~~s~~  388 (415)
                      .|.+.|...+..  ....+........|+|+|+.|+.+........|.++++..+...........+...+|||-
T Consensus       196 ~i~~~~~~~~~~--~~~~~~~~~~~p~~SPDG~~i~f~s~~~~~~~l~~~~~dg~~~~~lt~~~g~~~~p~WSP~  268 (269)
T d2hqsa1         196 HIAKQDLATGGV--QVLSSTFLDETPSLAPNGTMVIYSSSQGMGSVLNLVSTDGRFKARLPATDGQVKFPAWSPY  268 (269)
T ss_dssp             EEEEEETTTCCE--EECCCSSSCEEEEECTTSSEEEEEEEETTEEEEEEEETTSCCEEECCCSSSEEEEEEECCC
T ss_pred             eeeEeecccccc--eEeecCccccceEECCCCCEEEEEEcCCCCcEEEEEECCCCCEEEEeCCCCcEEeEEeCCC
Confidence            455555555433  3445566778889999999887665422456799999998877665556667888999983


No 51 
>d1qnia2 b.69.3.1 (A:10-450) Nitrous oxide reductase, N-terminal domain {Pseudomonas nautica [TaxId: 2743]}
Probab=99.15  E-value=1e-09  Score=105.19  Aligned_cols=189  Identities=6%  Similarity=0.019  Sum_probs=136.6

Q ss_pred             EEEEECCCcEEEEECCCCeeeEEecC------------------------------CCccEEEEE--eeCCEEEEE-eCC
Q 014934          223 LAVGTSHGKVQIWDASRCKRVRTMEG------------------------------HRLRVGALA--WSSSLLSSG-SRD  269 (415)
Q Consensus       223 la~g~~dg~V~iwd~~~~~~~~~l~~------------------------------h~~~V~~l~--~~~~~l~sg-s~d  269 (415)
                      +++|+.+|.|.+|++.+++.+..+.-                              |........  .++++|++. ..+
T Consensus        14 f~Sgg~sG~V~V~dlpS~r~l~~IpVfspd~~~g~g~~~es~~vl~~~~~~~~gd~hhP~~s~t~gtpDGr~lfV~d~~~   93 (441)
T d1qnia2          14 FWSGGHQGEVRVLGVPSMRELMRIPVFNVDSATGWGITNESKEILGGDQQYLNGDCHHPHISMTDGRYDGKYLFINDKAN   93 (441)
T ss_dssp             EEECBTTCCEEEEEETTTEEEEEECSSSBCTTTCTTTSHHHHHHHCSSSCCSCCCBCCCEEEEETTEEEEEEEEEEETTT
T ss_pred             EEeCCCCCcEEEEeCCCCcEEEEEEeEcCCCCEEEEECCccceEEecccccccCcccCCCcceecccCCCCEEEEEcCCC
Confidence            56777899999999999887777531                              112233332  235666544 578


Q ss_pred             CcEEEEECCCCCccEEEe-ccccCCeEEEEEeCCCC--EEEEEeCCC-----------------cEEEEECCCCceeEEe
Q 014934          270 KSILQRDIRAQEDFVSKL-SGHKSEVCGLKWSYDNR--ELASGGNDN-----------------RLFVWNQHSTQPVLKY  329 (415)
Q Consensus       270 g~I~iwd~~~~~~~~~~~-~~h~~~V~~l~~spdg~--~lasg~~dg-----------------~I~iwd~~~~~~~~~~  329 (415)
                      +.|.++|+++.+. ...+ ..+...+.+++|+|+|+  +++..+.+.                 .+..+|..+.+...++
T Consensus        94 ~rVavIDl~t~k~-~~ii~iP~g~gphgi~~spdg~t~YV~~~~~~~v~~~~dg~~~~~~~~~~~~~~iD~~t~~v~~qI  172 (441)
T d1qnia2          94 TRVARIRLDIMKT-DKITHIPNVQAIHGLRLQKVPKTNYVFCNAEFVIPQPNDGTDFSLDNSYTMFTAIDAETMDVAWQV  172 (441)
T ss_dssp             TEEEEEETTTTEE-EEEEECTTCCCEEEEEECCSSBCCEEEEEECSCEESSCSSSCCCGGGEEEEEEEEETTTCSEEEEE
T ss_pred             CEEEEEECCCCcE-eeEEecCCCCCccceEEeccCCEEEEEeccCCcccccCcccccccccccceEEeecCccceeeEEE
Confidence            8999999999873 3333 34677899999999998  454444432                 2355888888877776


Q ss_pred             ccCCCcEEEEEEcCCCCcEEEEEcCCC--------------------------------------CCeEEEEECCCCcEE
Q 014934          330 CEHTAAVKAIAWSPHLHGLLASGGGTA--------------------------------------DRCIRFWNTTTNTHL  371 (415)
Q Consensus       330 ~~h~~~V~~l~~sp~~~~llasggg~~--------------------------------------d~~I~iwd~~t~~~~  371 (415)
                      ... +....++|+|+|+++++++.++.                                      ++.+.+++....+.+
T Consensus       173 ~v~-~~p~~v~~spdGk~a~vt~~nse~~~~id~~t~~~~d~i~v~n~p~~~~~~~dGk~~~v~~~~v~vvd~~~~~~v~  251 (441)
T d1qnia2         173 IVD-GNLDNTDADYTGKYATSTCYNSERAVDLAGTMRNDRDWVVVFNVERIAAAVKAGNFKTIGDSKVPVVDGRGESEFT  251 (441)
T ss_dssp             EES-SCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCSSBCEEEEEEHHHHHHHHHTTCCBCCTTCCCCEEECSSSCSSE
T ss_pred             ecC-CCccceEECCCCCEEEEEecCCCceEEEeccCcceEEEEEeCCccceEEEecCCCEEEeCCCCcEEEEcccCCceE
Confidence            533 45788999999998888764211                                      355666666666777


Q ss_pred             EEeeCCCCEEEEEECCCCCeEEEEEecCCCcEEEEECCCCccc
Q 014934          372 SCMDTGSQVCNLVWSKNVNELVSTHGYSQNQIIVWRYPTMSKV  414 (415)
Q Consensus       372 ~~~~~~~~V~~l~~s~~~~~l~s~~g~~dg~I~vw~~~s~~~l  414 (415)
                      ..+..+.....+.++|||++++++ |..+++|.|||+.+++++
T Consensus       252 ~~IPvgksPhGv~vSPDGkyl~~~-~~~~~tvsv~d~~k~~~~  293 (441)
T d1qnia2         252 RYIPVPKNPHGLNTSPDGKYFIAN-GKLSPTVSVIAIDKLDDL  293 (441)
T ss_dssp             EEECCBSSCCCEEECTTSCEEEEE-CTTSSBEEEEEGGGHHHH
T ss_pred             EEEeCCCCccCceECCCCCEEEEe-CCcCCcEEEEEeehhhhH
Confidence            788777778889999999998876 788999999999887654


No 52 
>d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]}
Probab=99.12  E-value=8.7e-10  Score=103.65  Aligned_cols=207  Identities=9%  Similarity=-0.010  Sum_probs=131.3

Q ss_pred             eEeecCC-CcEEEEE--cCCeEEEEECCCCCeEEeEecCCCCCeEEEEEcC-CCCeEEEEECCCcEEEEECCCCeeeEEe
Q 014934          171 NLVDWSS-HNVLAVG--LGNCVYLWNACSSKVTKLCDLGIDDSVCSVGWAN-RNTHLAVGTSHGKVQIWDASRCKRVRTM  246 (415)
Q Consensus       171 ~~l~ws~-~~~la~~--~d~~V~iwd~~~~~~~~~~~~~~~~~V~~v~~sp-~g~~la~g~~dg~V~iwd~~~~~~~~~l  246 (415)
                      ..+.|+| ++.|+++  .++.|.+||+.+++............+     .+ ....++..+.||.+.+|++.........
T Consensus       127 ~~~a~SpDGk~l~va~~~~~~v~~~d~~~~~~~~~~~~~~~~~~-----~~~~~~~~v~~~~Dg~~~~~~~~~~~~~~~~  201 (368)
T d1mdah_         127 HIIGNCASSACLLFFLFGSSAAAGLSVPGASDDQLTKSASCFHI-----HPGAAATHYLGSCPASLAASDLAAAPAAAGI  201 (368)
T ss_dssp             TSEEECTTSSCEEEEECSSSCEEEEEETTTEEEEEEECSSCCCC-----EEEETTEEECCCCTTSCEEEECCSSCCCCEE
T ss_pred             cceEECCCCCEEEEEeCCCCeEEEEECCCCcEeEEeeccCcceE-----ccCCCceEEEEcCCCCEEEEEecCCceeeee
Confidence            3578999 6666666  358999999999998888764322211     22 2234555566777777776544322211


Q ss_pred             ------cCCCccEEEEEeeCCEEEEEeCCCcEEEEECCCCCccEEE-ecc----------ccCCeEEEEEeCCCCEEEEE
Q 014934          247 ------EGHRLRVGALAWSSSLLSSGSRDKSILQRDIRAQEDFVSK-LSG----------HKSEVCGLKWSYDNRELASG  309 (415)
Q Consensus       247 ------~~h~~~V~~l~~~~~~l~sgs~dg~I~iwd~~~~~~~~~~-~~~----------h~~~V~~l~~spdg~~lasg  309 (415)
                            ..+...+..+.+.+...+.....+.++++++......... ...          .......+++++++..++..
T Consensus       202 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~a~~~~~~~~~v~  281 (368)
T d1mdah_         202 VGAQCTGAQNCSSQAAQANYPGMLVWAVASSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMIL  281 (368)
T ss_dssp             CCCCSCTTSCBCSCCEEETTTTEEEECBSSCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEEEETTTTEEEEE
T ss_pred             eecccccccccceeecccccCcEEEEecCCCEEEEeecCCceEEEeecccccceeeeeeecCCCceeEEEcCCCCEEEEE
Confidence                  2233333444555333333344566677776654421111 000          11123457889998887664


Q ss_pred             eCC---------CcEEEEECCCCceeEEeccCCCcEEEEEEcCCCCc-EEEEEcCCCCCeEEEEECCCCcEEEEeeCCCC
Q 014934          310 GND---------NRLFVWNQHSTQPVLKYCEHTAAVKAIAWSPHLHG-LLASGGGTADRCIRFWNTTTNTHLSCMDTGSQ  379 (415)
Q Consensus       310 ~~d---------g~I~iwd~~~~~~~~~~~~h~~~V~~l~~sp~~~~-llasggg~~d~~I~iwd~~t~~~~~~~~~~~~  379 (415)
                      ..+         +.|.+||..+++.+..+. +...+.+++|+|+|+. +++++.  .|+.|++||..+|+.+..+..+..
T Consensus       282 ~~~~~~~~~~~~~~v~v~D~~t~~~~~~~~-~~~~~~~~a~spDG~~~ly~s~~--~~~~v~v~D~~tgk~~~~i~~g~~  358 (368)
T d1mdah_         282 TVEHSRSCLAAAENTSSVTASVGQTSGPIS-NGHDSDAIIAAQDGASDNYANSA--GTEVLDIYDAASDQDQSSVELDKG  358 (368)
T ss_dssp             EEECSSCTTSCEEEEEEEESSSCCEEECCE-EEEEECEEEECCSSSCEEEEEET--TTTEEEEEESSSCEEEEECCCCSC
T ss_pred             ecCCCceeecCCceEEEEECCCCcEeEEec-CCCceeEEEECCCCCEEEEEEeC--CCCeEEEEECCCCCEEEEEECCCC
Confidence            322         359999999999887774 4567889999999975 566765  789999999999999999987665


Q ss_pred             EEEEEE
Q 014934          380 VCNLVW  385 (415)
Q Consensus       380 V~~l~~  385 (415)
                      -..|.+
T Consensus       359 P~~l~~  364 (368)
T d1mdah_         359 PESLSV  364 (368)
T ss_dssp             CCEEEC
T ss_pred             CCEEEE
Confidence            555554


No 53 
>d1rwia_ b.68.9.1 (A:) Serine/threonine-protein kinase PknD {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=99.10  E-value=4e-08  Score=87.73  Aligned_cols=240  Identities=10%  Similarity=0.009  Sum_probs=150.8

Q ss_pred             ccCCCCCCCcceeEeecCC-CcEEEEEc--CCeEEEEECCCCCeEEeEecCCCCCeEEEEEcCCCCeEEEEECCCcEEEE
Q 014934          159 LDAPALQDDFYLNLVDWSS-HNVLAVGL--GNCVYLWNACSSKVTKLCDLGIDDSVCSVGWANRNTHLAVGTSHGKVQIW  235 (415)
Q Consensus       159 ld~~~l~~~~~i~~l~ws~-~~~la~~~--d~~V~iwd~~~~~~~~~~~~~~~~~V~~v~~sp~g~~la~g~~dg~V~iw  235 (415)
                      |....+.....-..|++++ +++.++..  .+.|..++....... ............++++++|.++++....+.++++
T Consensus         5 ~~~~~~~~~~~P~~vavd~dG~i~v~~~~~~~~i~~~~~~~~~~~-~~~~~~~~~p~gvav~~~g~i~v~d~~~~~i~~~   83 (260)
T d1rwia_           5 LPFTGIDFRLSPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTT-VLPFNGLYQPQGLAVDGAGTVYVTDFNNRVVTLA   83 (260)
T ss_dssp             CCCCSCCSCCCEEEEEECTTCCEEEEECSSSCEEEEEC----CEE-ECCCCSCCSCCCEEECTTCCEEEEETTTEEEEEC
T ss_pred             EecccCCCcCCCCEEEEcCCCCEEEEEcCCCCEEEEEcCCCceEE-EeccCCccCceEEEEcCCCCEEEeeeeeceeeee
Confidence            3333333344567888888 66555543  356676665444332 2222323456889999999987776666667666


Q ss_pred             ECCCCeeeEEecCCCccEEEEEee--CCEEEEEeCCCcEEEEECCCCCccEEEeccccCCeEEEEEeCCCCEEEEEeCCC
Q 014934          236 DASRCKRVRTMEGHRLRVGALAWS--SSLLSSGSRDKSILQRDIRAQEDFVSKLSGHKSEVCGLKWSYDNRELASGGNDN  313 (415)
Q Consensus       236 d~~~~~~~~~l~~h~~~V~~l~~~--~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~spdg~~lasg~~dg  313 (415)
                      +-.+...+.... ......++++.  ++++++-..+..+..++........ ..........+++++++++++++...++
T Consensus        84 ~~~~~~~~~~~~-~~~~p~~iavd~~g~i~v~d~~~~~~~~~~~~~~~~~~-~~~~~~~~p~~i~~~~~g~~~v~~~~~~  161 (260)
T d1rwia_          84 AGSNNQTVLPFD-GLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTV-LPFTGLNDPDGVAVDNSGNVYVTDTDNN  161 (260)
T ss_dssp             TTCSCCEECCCC-SCCSEEEEEECTTCCEEEEEGGGTEEEEECTTCSSCEE-CCCCSCCSCCEEEECTTCCEEEEEGGGT
T ss_pred             eeccceeeeeee-eeeecccccccccceeEeeccccccccccccccceeee-eeecccCCcceeeecCCCCEeeeccccc
Confidence            655554443333 23456788886  4666665566667777766544212 1112234567899999999988888889


Q ss_pred             cEEEEECCCCceeEEeccCCCcEEEEEEcCCCCcEEEEEcCCCCCeEEEEECCCCcEEEEee--CCCCEEEEEECCCCCe
Q 014934          314 RLFVWNQHSTQPVLKYCEHTAAVKAIAWSPHLHGLLASGGGTADRCIRFWNTTTNTHLSCMD--TGSQVCNLVWSKNVNE  391 (415)
Q Consensus       314 ~I~iwd~~~~~~~~~~~~h~~~V~~l~~sp~~~~llasggg~~d~~I~iwd~~t~~~~~~~~--~~~~V~~l~~s~~~~~  391 (415)
                      .|..+|.............-.....|++.++|. |+++..  ..+.|..++...... ..+.  .-....+++++++|+.
T Consensus       162 ~i~~~d~~~~~~~~~~~~~~~~p~gi~~d~~g~-l~vsd~--~~~~i~~~~~~~~~~-~~~~~~~~~~P~~i~~d~~g~l  237 (260)
T d1rwia_         162 RVVKLEAESNNQVVLPFTDITAPWGIAVDEAGT-VYVTEH--NTNQVVKLLAGSTTS-TVLPFTGLNTPLAVAVDSDRTV  237 (260)
T ss_dssp             EEEEECTTTCCEEECCCSSCCSEEEEEECTTCC-EEEEET--TTTEEEEECTTCSCC-EECCCCSCCCEEEEEECTTCCE
T ss_pred             cccccccccceeeeeeccccCCCccceeeeeee-eeeeec--CCCEEEEEeCCCCeE-EEEccCCCCCeEEEEEeCCCCE
Confidence            999999876544333234556678999999986 777775  577888887654432 2222  2356789999999987


Q ss_pred             EEEEEecCCCcEEEEE
Q 014934          392 LVSTHGYSQNQIIVWR  407 (415)
Q Consensus       392 l~s~~g~~dg~I~vw~  407 (415)
                      +++  ...++.|..++
T Consensus       238 ~va--d~~~~rI~~i~  251 (260)
T d1rwia_         238 YVA--DRGNDRVVKLT  251 (260)
T ss_dssp             EEE--EGGGTEEEEEC
T ss_pred             EEE--ECCCCEEEEEe
Confidence            776  44556555443


No 54 
>d1q7fa_ b.68.9.1 (A:) Brain tumor cg10719-pa {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=99.08  E-value=2.7e-07  Score=83.11  Aligned_cols=233  Identities=9%  Similarity=0.113  Sum_probs=157.0

Q ss_pred             eeEeecCC-CcEEEEE-cCCeEEEEECCCCCeEEeEec-C----CCCCeEEEEEcCCC-CeEEEE-ECCCcEEEEECCCC
Q 014934          170 LNLVDWSS-HNVLAVG-LGNCVYLWNACSSKVTKLCDL-G----IDDSVCSVGWANRN-THLAVG-TSHGKVQIWDASRC  240 (415)
Q Consensus       170 i~~l~ws~-~~~la~~-~d~~V~iwd~~~~~~~~~~~~-~----~~~~V~~v~~sp~g-~~la~g-~~dg~V~iwd~~~~  240 (415)
                      ...|+.++ ++++++. ..+.|++||.+ ++....+.. .    .......+++..+. .++++. +.++.|..++. .+
T Consensus        25 P~gvavd~dg~i~VaD~~n~rI~v~d~~-G~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~i~~~~~-~g  102 (279)
T d1q7fa_          25 PSGVAVNAQNDIIVADTNNHRIQIFDKE-GRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIYNQ-YG  102 (279)
T ss_dssp             EEEEEECTTCCEEEEEGGGTEEEEECTT-SCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEEECT-TS
T ss_pred             ccEEEEcCCCCEEEEECCCCEEEEEeCC-CCEEEEecccCCCcccccccccccccccccccceeccCCccccccccc-cc
Confidence            45677777 6666665 35789999865 555544421 1    11234566666554 344433 33456777775 45


Q ss_pred             eeeEEec-CCCccEEEEEee--CCEEEEEeCCCcEEEEECCCCCccEEEe--ccccCCeEEEEEeCCCCEEEEEeCCCcE
Q 014934          241 KRVRTME-GHRLRVGALAWS--SSLLSSGSRDKSILQRDIRAQEDFVSKL--SGHKSEVCGLKWSYDNRELASGGNDNRL  315 (415)
Q Consensus       241 ~~~~~l~-~h~~~V~~l~~~--~~~l~sgs~dg~I~iwd~~~~~~~~~~~--~~h~~~V~~l~~spdg~~lasg~~dg~I  315 (415)
                      +....+. ........++..  +.++++....+.+.+++....  .+..+  ..+......+++.++++++++....+.|
T Consensus       103 ~~~~~~~~~~~~~p~~~avd~~G~i~v~~~~~~~~~~~~~~g~--~~~~~g~~~~~~~~~~i~~d~~g~i~v~d~~~~~V  180 (279)
T d1q7fa_         103 QFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQNGN--VLHKFGCSKHLEFPNGVVVNDKQEIFISDNRAHCV  180 (279)
T ss_dssp             CEEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTTSC--EEEEEECTTTCSSEEEEEECSSSEEEEEEGGGTEE
T ss_pred             cceeecCCCcccccceeccccCCcEEEEeeccceeeEeccCCc--eeecccccccccccceeeeccceeEEeeeccccce
Confidence            6565553 334556677776  566666666677888776433  34433  3455678899999999999998889999


Q ss_pred             EEEECCCCceeEEec--cCCCcEEEEEEcCCCCcEEEEEcCCCCCeEEEEECCCCcEEEEeeC---CCCEEEEEECCCCC
Q 014934          316 FVWNQHSTQPVLKYC--EHTAAVKAIAWSPHLHGLLASGGGTADRCIRFWNTTTNTHLSCMDT---GSQVCNLVWSKNVN  390 (415)
Q Consensus       316 ~iwd~~~~~~~~~~~--~h~~~V~~l~~sp~~~~llasggg~~d~~I~iwd~~t~~~~~~~~~---~~~V~~l~~s~~~~  390 (415)
                      ++||. +++.+.++.  ++.....+|++.++|+ ++++-.+ .++.|.+|+ .+|+.+..+..   ......+++.++|.
T Consensus       181 ~~~d~-~G~~~~~~g~~g~~~~P~giavD~~G~-i~Vad~~-~~~~v~~f~-~~G~~~~~~~~~~~~~~p~~vav~~dG~  256 (279)
T d1q7fa_         181 KVFNY-EGQYLRQIGGEGITNYPIGVGINSNGE-ILIADNH-NNFNLTIFT-QDGQLISALESKVKHAQCFDVALMDDGS  256 (279)
T ss_dssp             EEEET-TCCEEEEESCTTTSCSEEEEEECTTCC-EEEEECS-SSCEEEEEC-TTSCEEEEEEESSCCSCEEEEEEETTTE
T ss_pred             eeeec-CCceeeeecccccccCCcccccccCCe-EEEEECC-CCcEEEEEC-CCCCEEEEEeCCCCCCCEeEEEEeCCCc
Confidence            99997 456676763  3455688999999997 6665431 356799998 56888877753   34688999999997


Q ss_pred             eEEEEEecCCCcEEEEECCCCcc
Q 014934          391 ELVSTHGYSQNQIIVWRYPTMSK  413 (415)
Q Consensus       391 ~l~s~~g~~dg~I~vw~~~s~~~  413 (415)
                      .+++  . .++.|++|++.....
T Consensus       257 l~V~--~-~n~~v~~fr~~~~~~  276 (279)
T d1q7fa_         257 VVLA--S-KDYRLYIYRYVQLAP  276 (279)
T ss_dssp             EEEE--E-TTTEEEEEECSCCCC
T ss_pred             EEEE--e-CCCeEEEEEeeeecC
Confidence            5554  3 578999999988754


No 55 
>d2hqsa1 b.68.4.1 (A:163-431) TolB, C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=99.05  E-value=2.6e-07  Score=81.91  Aligned_cols=220  Identities=11%  Similarity=0.039  Sum_probs=141.2

Q ss_pred             eEEEEECCCCCeEEeEecCCCCCeEEEEEcCCCCeEEEEECCC---cEEEEECCCCeeeEEecCCCccEEEEEee--CCE
Q 014934          188 CVYLWNACSSKVTKLCDLGIDDSVCSVGWANRNTHLAVGTSHG---KVQIWDASRCKRVRTMEGHRLRVGALAWS--SSL  262 (415)
Q Consensus       188 ~V~iwd~~~~~~~~~~~~~~~~~V~~v~~sp~g~~la~g~~dg---~V~iwd~~~~~~~~~l~~h~~~V~~l~~~--~~~  262 (415)
                      .|+|.|...+....+..  ....+.+-+|||||+.||......   .+.+.+...+.. ..+..+........|+  +..
T Consensus        20 ~l~i~d~dG~~~~~l~~--~~~~~~sP~wSPDGk~IAf~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~spdg~~   96 (269)
T d2hqsa1          20 ELRVSDYDGYNQFVVHR--SPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAV-RQVASFPRHNGAPAFSPDGSK   96 (269)
T ss_dssp             EEEEEETTSCSCEEEEE--ESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCE-EEEECCSSCEEEEEECTTSSE
T ss_pred             EEEEEcCCCCCcEEEec--CCCceeeeEECCCCCEEEEEEeeccCcceeeeecccCce-eEEeeeecccccceecCCCCe
Confidence            58898988777776664  457789999999999999876543   366666665544 3445577788888998  345


Q ss_pred             EEEEe-CCCcEEEEECCCCCccEEEeccccCCeEEEEEeCCCCEEEEEe-CCC--cEEEEECCCCceeEEeccCCCcEEE
Q 014934          263 LSSGS-RDKSILQRDIRAQEDFVSKLSGHKSEVCGLKWSYDNRELASGG-NDN--RLFVWNQHSTQPVLKYCEHTAAVKA  338 (415)
Q Consensus       263 l~sgs-~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~spdg~~lasg~-~dg--~I~iwd~~~~~~~~~~~~h~~~V~~  338 (415)
                      ++... .++...++.......................+++++..++..+ .++  .|.+.++..+.. ..+..+......
T Consensus        97 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~~~~~~~~-~~~~~~~~~~~~  175 (269)
T d2hqsa1          97 LAFALSKTGSLNLYVMDLASGQIRQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAP-QRITWEGSQNQD  175 (269)
T ss_dssp             EEEEECTTSSCEEEEEETTTCCEEECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCC-EECCCSSSEEEE
T ss_pred             eeEeeecCCccceeecccccccceeeeeccccccccccccccccceecccccCCceEeeeecccccc-eeeecccccccc
Confidence            54433 4444333333322222344444555566667888777655543 444  466667666543 344456677788


Q ss_pred             EEEcCCCCcEEEEEcCCCCCeEEEEECCCCcEEEEeeCCCCEEEEEECCCCCeEEEEEe-cCCCcEEEEECCCCc
Q 014934          339 IAWSPHLHGLLASGGGTADRCIRFWNTTTNTHLSCMDTGSQVCNLVWSKNVNELVSTHG-YSQNQIIVWRYPTMS  412 (415)
Q Consensus       339 l~~sp~~~~llasggg~~d~~I~iwd~~t~~~~~~~~~~~~V~~l~~s~~~~~l~s~~g-~~dg~I~vw~~~s~~  412 (415)
                      ..|+|++..++..........|.+.+...+.. ..+..........|+|||+.|+.++. .....|.+|++....
T Consensus       176 ~~~spdg~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~~~~~~p~~SPDG~~i~f~s~~~~~~~l~~~~~dg~~  249 (269)
T d2hqsa1         176 ADVSSDGKFMVMVSSNGGQQHIAKQDLATGGV-QVLSSTFLDETPSLAPNGTMVIYSSSQGMGSVLNLVSTDGRF  249 (269)
T ss_dssp             EEECTTSSEEEEEEECSSCEEEEEEETTTCCE-EECCCSSSCEEEEECTTSSEEEEEEEETTEEEEEEEETTSCC
T ss_pred             cccccccceeEEEeecCCceeeeEeecccccc-eEeecCccccceEECCCCCEEEEEEcCCCCcEEEEEECCCCC
Confidence            89999999887776522233455566665554 33444556678899999999987532 123478888887653


No 56 
>d1jofa_ b.69.10.1 (A:) 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neurospora crassa [TaxId: 5141]}
Probab=99.01  E-value=7.7e-08  Score=90.42  Aligned_cols=240  Identities=7%  Similarity=-0.005  Sum_probs=144.6

Q ss_pred             eeEeecCC-CcEEEEEcCCeEEEEECCC-CCeEEeEecCCCCCeEEEEEcCCCCeEEEEE---CCCcEEEEECCCC-e--
Q 014934          170 LNLVDWSS-HNVLAVGLGNCVYLWNACS-SKVTKLCDLGIDDSVCSVGWANRNTHLAVGT---SHGKVQIWDASRC-K--  241 (415)
Q Consensus       170 i~~l~ws~-~~~la~~~d~~V~iwd~~~-~~~~~~~~~~~~~~V~~v~~sp~g~~la~g~---~dg~V~iwd~~~~-~--  241 (415)
                      +..|++++ ++.|.+...+.+..|.+.. +................+.++++++.+.+..   ..+.|..+.+... .  
T Consensus        42 ~s~la~s~d~~~ly~~~~~~~~~~~i~~~~~~~~~~~~~~~~~p~~v~~~~~~~~~~v~~a~~~~~~v~~~~~~~~~~~~  121 (365)
T d1jofa_          42 ISWMTFDHERKNIYGAAMKKWSSFAVKSPTEIVHEASHPIGGHPRANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYG  121 (365)
T ss_dssp             CSEEEECTTSSEEEEEEBTEEEEEEEEETTEEEEEEEEECCSSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEE
T ss_pred             CCEEEEcCCCCEEEEEeCCcEEEEEEeCCCCeEEEeeecCCCCcEEEEECCCCCEEEEEEecCCCCEEEEeEccCCCCcc
Confidence            34578888 7777777777777776553 2233222222334567788899988443322   2455655543211 0  


Q ss_pred             -------------eeEEe-cCCCccEEEEEee--CCEEEEEeC-CCcEEEEECCCCCccE--EEe--ccccCCeEEEEEe
Q 014934          242 -------------RVRTM-EGHRLRVGALAWS--SSLLSSGSR-DKSILQRDIRAQEDFV--SKL--SGHKSEVCGLKWS  300 (415)
Q Consensus       242 -------------~~~~l-~~h~~~V~~l~~~--~~~l~sgs~-dg~I~iwd~~~~~~~~--~~~--~~h~~~V~~l~~s  300 (415)
                                   ..... ......+.++.|+  ++++++++. ...|.+|+........  ...  .........++|+
T Consensus       122 ~~~~~~~~~~~~~~~~~~~~q~~~h~h~v~~sPdG~~l~v~d~g~d~v~~~~~~~~g~~~~~~~~~~~~~g~gPr~i~f~  201 (365)
T d1jofa_         122 NVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMH  201 (365)
T ss_dssp             EEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEEC
T ss_pred             eeEeeeecceecCcccCcccCCCCcceEEEECCCCCEEEEeeCCCCEEEEEEccCCCceeeccceeecCCCCceEEEEEC
Confidence                         01111 1122346789998  466666653 4578888766543221  111  1234578899999


Q ss_pred             CCCCEEEEE-eCCCcEEEEECCCCceeE--Eec-----------------cCCCcEEEEEEcCCCCcEEEEEcCC---CC
Q 014934          301 YDNRELASG-GNDNRLFVWNQHSTQPVL--KYC-----------------EHTAAVKAIAWSPHLHGLLASGGGT---AD  357 (415)
Q Consensus       301 pdg~~lasg-~~dg~I~iwd~~~~~~~~--~~~-----------------~h~~~V~~l~~sp~~~~llasggg~---~d  357 (415)
                      |+++++.+. -.+++|.+|++...+...  ...                 .+......+.++|+|++++++.-+.   ..
T Consensus       202 pdg~~~yv~~e~~~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~lyvsnr~~~~~~~  281 (365)
T d1jofa_         202 PTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQ  281 (365)
T ss_dssp             TTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSC
T ss_pred             CCCceEEEeccCCCEEEEEEecCCCceEEEEeeeeccccccccccccccccccCCccceEECCCCCEEEEEcccCCCccc
Confidence            999988654 467899999987654321  110                 1122356789999999888875321   12


Q ss_pred             CeEEEEECCCCcEEE---Ee----eCCCCEEEEEECC-CCCeEEEEEecCCCcEEEEECCC
Q 014934          358 RCIRFWNTTTNTHLS---CM----DTGSQVCNLVWSK-NVNELVSTHGYSQNQIIVWRYPT  410 (415)
Q Consensus       358 ~~I~iwd~~t~~~~~---~~----~~~~~V~~l~~s~-~~~~l~s~~g~~dg~I~vw~~~s  410 (415)
                      ..|..|++.....+.   .+    ..+....+++++| +|++|+++ +..++.|.+|++..
T Consensus       282 ~~i~~~~~~~~g~~~~~~~~~~~~~~G~~p~~i~~~p~~G~~l~va-~~~s~~v~v~~~~~  341 (365)
T d1jofa_         282 GYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPCPWSDEWMAIT-DDQEGWLEIYRWKD  341 (365)
T ss_dssp             CEEEEEEECTTSCEEEEEEEEECSSCCTTCCCEEECTTCTTEEEEE-CSSSCEEEEEEEET
T ss_pred             eEEEEEEecCCCceeeEeEeeEEEcCCCCccEEEecCCCCCEEEEE-eCCCCeEEEEEEeC
Confidence            347777765432221   11    1355678899998 79988886 56789999998753


No 57 
>d1pjxa_ b.68.6.1 (A:) Diisopropylfluorophosphatase (phosphotriesterase, DFP) {Squid (Loligo vulgaris) [TaxId: 6622]}
Probab=98.99  E-value=4.4e-07  Score=83.24  Aligned_cols=234  Identities=9%  Similarity=0.075  Sum_probs=149.4

Q ss_pred             eeEeecCC-CcEEEEEc--------CCeEEEEECCCCCeEEeEec---CCCCCeEEEEEcCCCCeEEEEECCCcEEEEEC
Q 014934          170 LNLVDWSS-HNVLAVGL--------GNCVYLWNACSSKVTKLCDL---GIDDSVCSVGWANRNTHLAVGTSHGKVQIWDA  237 (415)
Q Consensus       170 i~~l~ws~-~~~la~~~--------d~~V~iwd~~~~~~~~~~~~---~~~~~V~~v~~sp~g~~la~g~~dg~V~iwd~  237 (415)
                      ...++|.+ ++++.+..        ++.|+.||..+++.......   ........+.|.++|+.|+++...+.|..+|.
T Consensus        20 ~EGpa~d~dG~ly~~~~~~~~~~~~~g~I~r~d~~~~~~~~~~~~~~~~~~g~P~Gl~~~~dg~~l~vad~~~~i~~~~~   99 (314)
T d1pjxa_          20 AEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADMRLGLLVVQT   99 (314)
T ss_dssp             CEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEETTTEEEEEET
T ss_pred             CeEeEEeCCCCEEEEECccccccccCCEEEEEECCCCcEEEEECCccccCCCcceeEEEeCCCCEEEEEECCCeEEEEeC
Confidence            45678888 67666653        35799999988876554421   11234678999999998888887777888897


Q ss_pred             CCCeeeEEecCCC----ccEEEEEee--CCEEEEEeC---------------CCcEEEEECCCCCccEEEeccccCCeEE
Q 014934          238 SRCKRVRTMEGHR----LRVGALAWS--SSLLSSGSR---------------DKSILQRDIRAQEDFVSKLSGHKSEVCG  296 (415)
Q Consensus       238 ~~~~~~~~l~~h~----~~V~~l~~~--~~~l~sgs~---------------dg~I~iwd~~~~~~~~~~~~~h~~~V~~  296 (415)
                      .............    ...+.+++.  +++.++-..               +|.|+.++...  . ...+...-..-++
T Consensus       100 ~g~~~~~~~~~~~g~~~~~pndl~~d~~G~lyvtd~~~~~~~~~~~~~~~~~~G~v~~~~~dg--~-~~~~~~~~~~pNG  176 (314)
T d1pjxa_         100 DGTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTDG--Q-MIQVDTAFQFPNG  176 (314)
T ss_dssp             TSCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTTS--C-EEEEEEEESSEEE
T ss_pred             CCcEEEEEeccccccccCCCcEEEECCCCCEEEecCccCcccccccceeccCCceEEEEeecC--c-eeEeeCCcceeee
Confidence            6543222111111    124566666  344444211               22344444322  1 2222233344578


Q ss_pred             EEEeCCCC-----EEEEEeCCCcEEEEECCCCceeE------Eecc-CCCcEEEEEEcCCCCcEEEEEcCCCCCeEEEEE
Q 014934          297 LKWSYDNR-----ELASGGNDNRLFVWNQHSTQPVL------KYCE-HTAAVKAIAWSPHLHGLLASGGGTADRCIRFWN  364 (415)
Q Consensus       297 l~~spdg~-----~lasg~~dg~I~iwd~~~~~~~~------~~~~-h~~~V~~l~~sp~~~~llasggg~~d~~I~iwd  364 (415)
                      ++|+|++.     ++++-+..+.|..||+.....+.      .+.. +......+++..+|+ |+++..  ..+.|.+||
T Consensus       177 i~~~~d~d~~~~~lyv~d~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~~pdGiavD~~Gn-lyVa~~--~~g~I~~~d  253 (314)
T d1pjxa_         177 IAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNN-LLVANW--GSSHIEVFG  253 (314)
T ss_dssp             EEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCC-EEEEEE--TTTEEEEEC
T ss_pred             eEECCCCCcceeEEEEEeecccceEEeeccCccccceeeEEEEccccccccceeeEEecCCc-EEEEEc--CCCEEEEEe
Confidence            99999875     44555678889999876432221      2222 233467899999997 665543  478999999


Q ss_pred             CCCCcEEEEeeC-CCCEEEEEECCCCCeEEEEEecCCCcEEEEECCC
Q 014934          365 TTTNTHLSCMDT-GSQVCNLVWSKNVNELVSTHGYSQNQIIVWRYPT  410 (415)
Q Consensus       365 ~~t~~~~~~~~~-~~~V~~l~~s~~~~~l~s~~g~~dg~I~vw~~~s  410 (415)
                      ..+++.+..+.. ....++++|.++++.|..+ ....|.|...+++.
T Consensus       254 p~~g~~~~~i~~p~~~~t~~afg~d~~~lyVt-~~~~g~i~~~~~~~  299 (314)
T d1pjxa_         254 PDGGQPKMRIRCPFEKPSNLHFKPQTKTIFVT-EHENNAVWKFEWQR  299 (314)
T ss_dssp             TTCBSCSEEEECSSSCEEEEEECTTSSEEEEE-ETTTTEEEEEECSS
T ss_pred             CCCCEEEEEEECCCCCEEEEEEeCCCCEEEEE-ECCCCcEEEEECCC
Confidence            998887777765 4678999999999877665 45678888888753


No 58 
>d2dg1a1 b.68.6.1 (A:6-324) Lactonase Drp35 {Staphylococcus aureus [TaxId: 1280]}
Probab=98.97  E-value=1.8e-06  Score=79.12  Aligned_cols=224  Identities=8%  Similarity=0.075  Sum_probs=145.1

Q ss_pred             CcceeEeecCC-CcEEEEE-cCCeEEEEECCCCCeEEeEecCCCCCeEEEEEcCCCCeEEEEEC----CCcEEEEECCCC
Q 014934          167 DFYLNLVDWSS-HNVLAVG-LGNCVYLWNACSSKVTKLCDLGIDDSVCSVGWANRNTHLAVGTS----HGKVQIWDASRC  240 (415)
Q Consensus       167 ~~~i~~l~ws~-~~~la~~-~d~~V~iwd~~~~~~~~~~~~~~~~~V~~v~~sp~g~~la~g~~----dg~V~iwd~~~~  240 (415)
                      .+.+..+.|.+ +++..+. .++.|+.|+..+++...... ........+++.++|+++++...    .+.|...+....
T Consensus        39 ~~~lEG~~~D~~G~Ly~~D~~~g~I~ri~p~g~~~~~~~~-~~~~~p~gla~~~dG~l~va~~~~~~~~~~i~~~~~~~~  117 (319)
T d2dg1a1          39 GLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRPFV-SHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGD  117 (319)
T ss_dssp             CCCEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEE-CSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSC
T ss_pred             CcCcEeCEECCCCCEEEEECCCCEEEEEECCCCeEEEEEe-CCCCCeeEEEECCCCCEEEEecCCCccceeEEEEcCCCc
Confidence            45678899998 6766666 56899999998877665553 44567899999999987776543    234555555554


Q ss_pred             eeeEEecC--CCccEEEEEee--CCEEEEEeC------CCcEEEEECCCCCccEEEeccccCCeEEEEEeCCCCEEE-EE
Q 014934          241 KRVRTMEG--HRLRVGALAWS--SSLLSSGSR------DKSILQRDIRAQEDFVSKLSGHKSEVCGLKWSYDNRELA-SG  309 (415)
Q Consensus       241 ~~~~~l~~--h~~~V~~l~~~--~~~l~sgs~------dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~spdg~~la-sg  309 (415)
                      ........  -......+++.  +++.++...      .+.+..++.....  +..+...-...++|+|+|+++.|. +-
T Consensus       118 ~~~~~~~~~~~~~~~nd~~~d~~G~l~vtd~~~~~~~~~g~v~~~~~dg~~--~~~~~~~~~~pnGia~s~dg~~lyvad  195 (319)
T d2dg1a1         118 NLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRT--VTPIIQNISVANGIALSTDEKVLWVTE  195 (319)
T ss_dssp             SCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCC--EEEEEEEESSEEEEEECTTSSEEEEEE
T ss_pred             eeeeeccCCCcccCCcceeEEeccceeecccccccccCcceeEEEecccce--eEEEeeccceeeeeeeccccceEEEec
Confidence            43333322  13356777776  444444322      1235555544332  333333334568899999998664 44


Q ss_pred             eCCCcEEEEECCCC-ceeEE-------eccCCCcEEEEEEcCCCCcEEEEEcCCCCCeEEEEECCCCcEEEEeeCC----
Q 014934          310 GNDNRLFVWNQHST-QPVLK-------YCEHTAAVKAIAWSPHLHGLLASGGGTADRCIRFWNTTTNTHLSCMDTG----  377 (415)
Q Consensus       310 ~~dg~I~iwd~~~~-~~~~~-------~~~h~~~V~~l~~sp~~~~llasggg~~d~~I~iwd~~t~~~~~~~~~~----  377 (415)
                      +..++|..||+... .....       ..........+++.++|+ |+++..  ..+.|.+||. .|+.+..+...    
T Consensus       196 ~~~~~I~~~d~~~~g~~~~~~~~~~~~~~~~~~~PdGl~vD~~G~-l~Va~~--~~g~V~~~~p-~G~~l~~i~~P~~~~  271 (319)
T d2dg1a1         196 TTANRLHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCIDSDDN-LYVAMY--GQGRVLVFNK-RGYPIGQILIPGRDE  271 (319)
T ss_dssp             GGGTEEEEEEECTTSSSEEEEEEEEEEECCSSSEEEEEEEBTTCC-EEEEEE--TTTEEEEECT-TSCEEEEEECTTGGG
T ss_pred             ccCCceEEEEEcCCCceeccccceeeeccCCccceeeeeEcCCCC-EEEEEc--CCCEEEEECC-CCcEEEEEeCCCcCC
Confidence            56789999997643 21111       111223457899999997 666554  5899999995 79998888632    


Q ss_pred             ---CCEEEEEECCCCCeEEEEEe
Q 014934          378 ---SQVCNLVWSKNVNELVSTHG  397 (415)
Q Consensus       378 ---~~V~~l~~s~~~~~l~s~~g  397 (415)
                         ..+++++|.+.+..++++..
T Consensus       272 ~~~~~~~~~~~~~~~~~~~~t~~  294 (319)
T d2dg1a1         272 GHMLRSTHPQFIPGTNQLIICSN  294 (319)
T ss_dssp             TCSCBCCEEEECTTSCEEEEEEE
T ss_pred             CcCceeeeEEEeCCCCEEEEEcC
Confidence               35789999998888877643


No 59 
>d2bgra1 b.70.3.1 (A:39-508) Dipeptidyl peptidase IV/CD26, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}
Probab=98.95  E-value=3.2e-09  Score=103.15  Aligned_cols=145  Identities=16%  Similarity=0.140  Sum_probs=105.3

Q ss_pred             EEEee-CCEEEEEeCCCcEEEEECCCCCccEEEe-----ccccCCeEEEEEeCCCCEEEEEeC---------CCcEEEEE
Q 014934          255 ALAWS-SSLLSSGSRDKSILQRDIRAQEDFVSKL-----SGHKSEVCGLKWSYDNRELASGGN---------DNRLFVWN  319 (415)
Q Consensus       255 ~l~~~-~~~l~sgs~dg~I~iwd~~~~~~~~~~~-----~~h~~~V~~l~~spdg~~lasg~~---------dg~I~iwd  319 (415)
                      .+.|. +..++. ..|+.|.+||+.++.. ...+     ..|...|.++.|||||++||.+++         ++.+.|||
T Consensus        21 ~~~W~~d~~~~~-~~~~~~~~~~~~t~~~-~~~~~~~~~~~~~~~i~~~~~SpDg~~i~~~~~~~~~~r~s~~~~~~l~d   98 (470)
T d2bgra1          21 SLRWISDHEYLY-KQENNILVFNAEYGNS-SVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDIYD   98 (470)
T ss_dssp             CCEECSSSEEEE-ESSSCEEEEETTTCCE-EEEECTTTTTTSSSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEE
T ss_pred             CCEeCCCCEEEE-EcCCcEEEEECCCCCE-EEEEchhhhhhccCccceeEECCCCCEEEEEECCcceeeeccCceEEEEE
Confidence            35565 233333 4578899999999874 3333     345578999999999999998754         56789999


Q ss_pred             CCCCceeEEeccCCCcEEEEEEcCCCCcEEEEEcCCCCCeEEEEECCCCcEEEEeeCC-------------------CCE
Q 014934          320 QHSTQPVLKYCEHTAAVKAIAWSPHLHGLLASGGGTADRCIRFWNTTTNTHLSCMDTG-------------------SQV  380 (415)
Q Consensus       320 ~~~~~~~~~~~~h~~~V~~l~~sp~~~~llasggg~~d~~I~iwd~~t~~~~~~~~~~-------------------~~V  380 (415)
                      +.+++. ..+..|...+..+.|+|+|+.++..    .++.+.+|+..+++..+....+                   +..
T Consensus        99 ~~~~~~-~~l~~~~~~~~~~~~SPDG~~ia~~----~~~~l~~~~~~~g~~~~~t~~~~~~~~~~g~~d~~~~~~~~~~~  173 (470)
T d2bgra1          99 LNKRQL-ITEERIPNNTQWVTWSPVGHKLAYV----WNNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAY  173 (470)
T ss_dssp             TTTTEE-CCSSCCCTTEEEEEECSSTTCEEEE----ETTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSS
T ss_pred             CCCCcc-cccccCCccccccccccCcceeeEe----ecccceEEECCCCceeeeeeccCCCcccccccceeeeeeecCCc
Confidence            998864 5677899999999999999966654    3788999999998876544211                   224


Q ss_pred             EEEEECCCCCeEEEEEecCCCcEEEEE
Q 014934          381 CNLVWSKNVNELVSTHGYSQNQIIVWR  407 (415)
Q Consensus       381 ~~l~~s~~~~~l~s~~g~~dg~I~vw~  407 (415)
                      ..+.|||||+.|+... ..+..+..|.
T Consensus       174 ~~~~wSPDGk~ia~~~-~d~~~v~~~~  199 (470)
T d2bgra1         174 SALWWSPNGTFLAYAQ-FNDTEVPLIE  199 (470)
T ss_dssp             BCEEECTTSSEEEEEE-EECTTCCEEE
T ss_pred             cccEECCCCCccceeE-ecCCcCceEE
Confidence            5578999999999863 2333344444


No 60 
>d2p4oa1 b.68.6.3 (A:4-305) Hypothetical protein All0351 homologue {Nostoc punctiforme [TaxId: 272131]}
Probab=98.85  E-value=1.9e-06  Score=78.15  Aligned_cols=220  Identities=9%  Similarity=0.038  Sum_probs=145.3

Q ss_pred             cceeEeecCC-CcEEEEEc-CCeEEEEECCCCCeEEeEecCCCCCeEEEEEcCCCCeEEEEECCCcEEEEECCCCe-eeE
Q 014934          168 FYLNLVDWSS-HNVLAVGL-GNCVYLWNACSSKVTKLCDLGIDDSVCSVGWANRNTHLAVGTSHGKVQIWDASRCK-RVR  244 (415)
Q Consensus       168 ~~i~~l~ws~-~~~la~~~-d~~V~iwd~~~~~~~~~~~~~~~~~V~~v~~sp~g~~la~g~~dg~V~iwd~~~~~-~~~  244 (415)
                      .++..+++++ ++++++.. ++.|+.|+.. ++......  ....+.+++|+++|+++++...++.+.+|+..... ...
T Consensus        28 ~~~e~iAv~pdG~l~vt~~~~~~I~~i~p~-g~~~~~~~--~~~~~~gla~~~dG~l~v~~~~~~~~~~~~~~~~~~~~~  104 (302)
T d2p4oa1          28 TFLENLASAPDGTIFVTNHEVGEIVSITPD-GNQQIHAT--VEGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTVE  104 (302)
T ss_dssp             CCEEEEEECTTSCEEEEETTTTEEEEECTT-CCEEEEEE--CSSEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSCEE
T ss_pred             CCcCCEEECCCCCEEEEeCCCCEEEEEeCC-CCEEEEEc--CCCCcceEEEcCCCCeEEEecCCceEEEEEeccccccee
Confidence            3577899999 78887774 6889999865 44444443  45789999999999999998888888888764321 111


Q ss_pred             Ee--cCCCccEEEEEee--CCEEEEEeCCCcEEEEECCCCCccEEEec---------cccCCeEEEEEeCCCCEEEEEeC
Q 014934          245 TM--EGHRLRVGALAWS--SSLLSSGSRDKSILQRDIRAQEDFVSKLS---------GHKSEVCGLKWSYDNRELASGGN  311 (415)
Q Consensus       245 ~l--~~h~~~V~~l~~~--~~~l~sgs~dg~I~iwd~~~~~~~~~~~~---------~h~~~V~~l~~spdg~~lasg~~  311 (415)
                      .+  .........+++.  ++++++-+.++.+..+|.......+....         .......++.++. +.++++.+.
T Consensus       105 ~~~~~~~~~~~n~i~~~~~g~~~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ngi~~~~-~~l~~~~~~  183 (302)
T d2p4oa1         105 TLLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGLKRFG-NFLYVSNTE  183 (302)
T ss_dssp             EEEECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEEEEET-TEEEEEETT
T ss_pred             eccccCCccccceeEEccCCCEEeeccccccceeeeccCCcceeEecCCccceeeccCcccccccccccC-CceeeecCC
Confidence            11  1234567888886  56677777888898888877652222211         1122456777763 345566677


Q ss_pred             CCcEEEEECCCCceeEE--eccCCCcEEEEEEcCCCCcEEEEEcCCCCCeEEEEECCCCcEEEEe--e-CCCCEEEEEE-
Q 014934          312 DNRLFVWNQHSTQPVLK--YCEHTAAVKAIAWSPHLHGLLASGGGTADRCIRFWNTTTNTHLSCM--D-TGSQVCNLVW-  385 (415)
Q Consensus       312 dg~I~iwd~~~~~~~~~--~~~h~~~V~~l~~sp~~~~llasggg~~d~~I~iwd~~t~~~~~~~--~-~~~~V~~l~~-  385 (415)
                      .+.|+.++.........  ..........+++.++|. ++++..  .++.|..++.. |+.....  . .....++++| 
T Consensus       184 ~~~i~~~~~~~~~~~~~~~~~~~~~~pdgia~d~dG~-l~va~~--~~~~V~~i~p~-G~~~~~~~~~~~~~~pt~vafg  259 (302)
T d2p4oa1         184 KMLLLRIPVDSTDKPGEPEIFVEQTNIDDFAFDVEGN-LYGATH--IYNSVVRIAPD-RSTTIIAQAEQGVIGSTAVAFG  259 (302)
T ss_dssp             TTEEEEEEBCTTSCBCCCEEEEESCCCSSEEEBTTCC-EEEECB--TTCCEEEECTT-CCEEEEECGGGTCTTEEEEEEC
T ss_pred             CCeEEeccccccccccccccccCCCCCcceEECCCCC-EEEEEc--CCCcEEEECCC-CCEEEEEecCCCCCCceEEEEc
Confidence            88899998765432211  112233456799999997 666654  57889988765 4432222  2 3356899999 


Q ss_pred             --CCCCCeEEEE
Q 014934          386 --SKNVNELVST  395 (415)
Q Consensus       386 --s~~~~~l~s~  395 (415)
                        ++|++.|.++
T Consensus       260 ~~~~D~~~Lyvt  271 (302)
T d2p4oa1         260 QTEGDCTAIYVV  271 (302)
T ss_dssp             CSTTTTTEEEEE
T ss_pred             CCCCCCCEEEEE
Confidence              6788888764


No 61 
>d2p4oa1 b.68.6.3 (A:4-305) Hypothetical protein All0351 homologue {Nostoc punctiforme [TaxId: 272131]}
Probab=98.81  E-value=3.9e-07  Score=82.95  Aligned_cols=194  Identities=10%  Similarity=0.037  Sum_probs=137.8

Q ss_pred             CCCeEEEEEcCCCCeEEEEECCCcEEEEECCCCeeeEEecCCCccEEEEEee--CCEEEEEeCCCcEEEEECCCCCccEE
Q 014934          208 DDSVCSVGWANRNTHLAVGTSHGKVQIWDASRCKRVRTMEGHRLRVGALAWS--SSLLSSGSRDKSILQRDIRAQEDFVS  285 (415)
Q Consensus       208 ~~~V~~v~~sp~g~~la~g~~dg~V~iwd~~~~~~~~~l~~h~~~V~~l~~~--~~~l~sgs~dg~I~iwd~~~~~~~~~  285 (415)
                      ...+..++++|||+++++...+++|..||....  ...+......+.+++|.  ++++++...++.+..++.........
T Consensus        27 ~~~~e~iAv~pdG~l~vt~~~~~~I~~i~p~g~--~~~~~~~~~~~~gla~~~dG~l~v~~~~~~~~~~~~~~~~~~~~~  104 (302)
T d2p4oa1          27 NTFLENLASAPDGTIFVTNHEVGEIVSITPDGN--QQIHATVEGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTVE  104 (302)
T ss_dssp             TCCEEEEEECTTSCEEEEETTTTEEEEECTTCC--EEEEEECSSEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSCEE
T ss_pred             CCCcCCEEECCCCCEEEEeCCCCEEEEEeCCCC--EEEEEcCCCCcceEEEcCCCCeEEEecCCceEEEEEeccccccee
Confidence            346889999999999999888999988886533  33444566789999998  57888888888888888765443233


Q ss_pred             Eec--cccCCeEEEEEeCCCCEEEEEeCCCcEEEEECCCCceeEEec----------cCCCcEEEEEEcCCCCcEEEEEc
Q 014934          286 KLS--GHKSEVCGLKWSYDNRELASGGNDNRLFVWNQHSTQPVLKYC----------EHTAAVKAIAWSPHLHGLLASGG  353 (415)
Q Consensus       286 ~~~--~h~~~V~~l~~spdg~~lasg~~dg~I~iwd~~~~~~~~~~~----------~h~~~V~~l~~sp~~~~llasgg  353 (415)
                      .+.  ........+.+.++++++++-+.++.+..+|...+.......          .....+..+.+.  +..++++..
T Consensus       105 ~~~~~~~~~~~n~i~~~~~g~~~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ngi~~~--~~~l~~~~~  182 (302)
T d2p4oa1         105 TLLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGLKRF--GNFLYVSNT  182 (302)
T ss_dssp             EEEECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEEEEE--TTEEEEEET
T ss_pred             eccccCCccccceeEEccCCCEEeeccccccceeeeccCCcceeEecCCccceeeccCccccccccccc--CCceeeecC
Confidence            322  344568899999999999998899999999988764332221          112345666665  445777765


Q ss_pred             CCCCCeEEEEECCCCcEEE---EeeCCCCEEEEEECCCCCeEEEEEecCCCcEEEEECC
Q 014934          354 GTADRCIRFWNTTTNTHLS---CMDTGSQVCNLVWSKNVNELVSTHGYSQNQIIVWRYP  409 (415)
Q Consensus       354 g~~d~~I~iwd~~t~~~~~---~~~~~~~V~~l~~s~~~~~l~s~~g~~dg~I~vw~~~  409 (415)
                        ..+.|..++........   ..........++++++|+.+++  ...+++|..++..
T Consensus       183 --~~~~i~~~~~~~~~~~~~~~~~~~~~~pdgia~d~dG~l~va--~~~~~~V~~i~p~  237 (302)
T d2p4oa1         183 --EKMLLLRIPVDSTDKPGEPEIFVEQTNIDDFAFDVEGNLYGA--THIYNSVVRIAPD  237 (302)
T ss_dssp             --TTTEEEEEEBCTTSCBCCCEEEEESCCCSSEEEBTTCCEEEE--CBTTCCEEEECTT
T ss_pred             --CCCeEEeccccccccccccccccCCCCCcceEECCCCCEEEE--EcCCCcEEEECCC
Confidence              68899988876543222   2223445667999999997777  5567888888754


No 62 
>d1jofa_ b.69.10.1 (A:) 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neurospora crassa [TaxId: 5141]}
Probab=98.69  E-value=7.6e-06  Score=76.34  Aligned_cols=222  Identities=9%  Similarity=0.025  Sum_probs=125.9

Q ss_pred             CCeEEE--EECCCCCeEE--eEecCCCCCeEEEEEcCCCCeEEEEECCCcEEEEECCCCeeeEEecC--CCccEEEEEee
Q 014934          186 GNCVYL--WNACSSKVTK--LCDLGIDDSVCSVGWANRNTHLAVGTSHGKVQIWDASRCKRVRTMEG--HRLRVGALAWS  259 (415)
Q Consensus       186 d~~V~i--wd~~~~~~~~--~~~~~~~~~V~~v~~sp~g~~la~g~~dg~V~iwd~~~~~~~~~l~~--h~~~V~~l~~~  259 (415)
                      .+.|+.  +|.+++++..  .........+..|+|++++++|.+... +.+..|.+.....+.....  .......++++
T Consensus        13 ~~~i~~~~fd~~~~~l~~~~~~~~~~~~~~s~la~s~d~~~ly~~~~-~~~~~~~i~~~~~~~~~~~~~~~~~p~~v~~~   91 (365)
T d1jofa_          13 PGAIFTVQFDDEKLTCKLIKRTEIPQDEPISWMTFDHERKNIYGAAM-KKWSSFAVKSPTEIVHEASHPIGGHPRANDAD   91 (365)
T ss_dssp             SCEEEEEEEETTTTEEEEEEEEECCTTCCCSEEEECTTSSEEEEEEB-TEEEEEEEEETTEEEEEEEEECCSSGGGGCTT
T ss_pred             CCCEEEEEEcCCCCeEEEeeeeeccCCCCCCEEEEcCCCCEEEEEeC-CcEEEEEEeCCCCeEEEeeecCCCCcEEEEEC
Confidence            456765  4555555432  223344556778999999999887754 5677887653221211110  11112223333


Q ss_pred             --CCE--EEEEe-CCCcEEEEECC------------CCCccE----EEeccccCCeEEEEEeCCCCEEEEEeC-CCcEEE
Q 014934          260 --SSL--LSSGS-RDKSILQRDIR------------AQEDFV----SKLSGHKSEVCGLKWSYDNRELASGGN-DNRLFV  317 (415)
Q Consensus       260 --~~~--l~sgs-~dg~I~iwd~~------------~~~~~~----~~~~~h~~~V~~l~~spdg~~lasg~~-dg~I~i  317 (415)
                        ++.  +++.. ..+.|..+.+.            ......    .........+.++.|+|||++|++++. .+.|.+
T Consensus        92 ~~~~~~~v~~a~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~h~h~v~~sPdG~~l~v~d~g~d~v~~  171 (365)
T d1jofa_          92 TNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWT  171 (365)
T ss_dssp             SCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEE
T ss_pred             CCCCEEEEEEecCCCCEEEEeEccCCCCcceeEeeeecceecCcccCcccCCCCcceEEEECCCCCEEEEeeCCCCEEEE
Confidence              221  22221 23344443322            111110    011112234789999999998888764 457888


Q ss_pred             EECCCCceeE---Ee--ccCCCcEEEEEEcCCCCcEEEEEcCCCCCeEEEEECCCCcE--EEEee---------------
Q 014934          318 WNQHSTQPVL---KY--CEHTAAVKAIAWSPHLHGLLASGGGTADRCIRFWNTTTNTH--LSCMD---------------  375 (415)
Q Consensus       318 wd~~~~~~~~---~~--~~h~~~V~~l~~sp~~~~llasggg~~d~~I~iwd~~t~~~--~~~~~---------------  375 (415)
                      |+......+.   ..  .........++|+|+++.++++..  .++.|.+|++..++.  +....               
T Consensus       172 ~~~~~~g~~~~~~~~~~~~~g~gPr~i~f~pdg~~~yv~~e--~~~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  249 (365)
T d1jofa_         172 HRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALME--AGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPE  249 (365)
T ss_dssp             EEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEET--TTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTT
T ss_pred             EEccCCCceeeccceeecCCCCceEEEEECCCCceEEEecc--CCCEEEEEEecCCCceEEEEeeeeccccccccccccc
Confidence            8765432221   11  124567899999999998888876  799999999876542  22211               


Q ss_pred             ---CCCCEEEEEECCCCCeEEEEEecCC----CcEEEEECCC
Q 014934          376 ---TGSQVCNLVWSKNVNELVSTHGYSQ----NQIIVWRYPT  410 (415)
Q Consensus       376 ---~~~~V~~l~~s~~~~~l~s~~g~~d----g~I~vw~~~s  410 (415)
                         .......+.++|+|++|+++....+    ..|..|++..
T Consensus       250 ~~~~~~~~~~i~~spdG~~lyvsnr~~~~~~~~~i~~~~~~~  291 (365)
T d1jofa_         250 TGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRD  291 (365)
T ss_dssp             TSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECT
T ss_pred             cccccCCccceEECCCCCEEEEEcccCCCccceEEEEEEecC
Confidence               0112567899999999988643222    2377777654


No 63 
>d2dg1a1 b.68.6.1 (A:6-324) Lactonase Drp35 {Staphylococcus aureus [TaxId: 1280]}
Probab=98.66  E-value=6e-06  Score=75.54  Aligned_cols=197  Identities=8%  Similarity=0.046  Sum_probs=128.3

Q ss_pred             CCeEEEEEcCCCCeEEEEECCCcEEEEECCCCeeeEEecCCCccEEEEEee--CCEEEEEeC----CCcEEEEECCCCCc
Q 014934          209 DSVCSVGWANRNTHLAVGTSHGKVQIWDASRCKRVRTMEGHRLRVGALAWS--SSLLSSGSR----DKSILQRDIRAQED  282 (415)
Q Consensus       209 ~~V~~v~~sp~g~~la~g~~dg~V~iwd~~~~~~~~~l~~h~~~V~~l~~~--~~~l~sgs~----dg~I~iwd~~~~~~  282 (415)
                      ..+..++|.++|++.++-...|.|..|+....+....+.........|++.  ++++++...    .+.|...+..... 
T Consensus        40 ~~lEG~~~D~~G~Ly~~D~~~g~I~ri~p~g~~~~~~~~~~~~~p~gla~~~dG~l~va~~~~~~~~~~i~~~~~~~~~-  118 (319)
T d2dg1a1          40 LQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDN-  118 (319)
T ss_dssp             CCEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCS-
T ss_pred             cCcEeCEECCCCCEEEEECCCCEEEEEECCCCeEEEEEeCCCCCeeEEEECCCCCEEEEecCCCccceeEEEEcCCCce-
Confidence            345689999999977777788999999988776555555556678889987  455555432    2334555554443 


Q ss_pred             cEEEecc--ccCCeEEEEEeCCCCEEEEEeC------CCcEEEEECCCCceeEEeccCCCcEEEEEEcCCCCcEEEEEcC
Q 014934          283 FVSKLSG--HKSEVCGLKWSYDNRELASGGN------DNRLFVWNQHSTQPVLKYCEHTAAVKAIAWSPHLHGLLASGGG  354 (415)
Q Consensus       283 ~~~~~~~--h~~~V~~l~~spdg~~lasg~~------dg~I~iwd~~~~~~~~~~~~h~~~V~~l~~sp~~~~llasggg  354 (415)
                      .......  -......+++.++|++.++...      .+.+..++...+ .+..+...-...+.++|+|+++.|+++-. 
T Consensus       119 ~~~~~~~~~~~~~~nd~~~d~~G~l~vtd~~~~~~~~~g~v~~~~~dg~-~~~~~~~~~~~pnGia~s~dg~~lyvad~-  196 (319)
T d2dg1a1         119 LQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFR-TVTPIIQNISVANGIALSTDEKVLWVTET-  196 (319)
T ss_dssp             CEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSC-CEEEEEEEESSEEEEEECTTSSEEEEEEG-
T ss_pred             eeeeccCCCcccCCcceeEEeccceeecccccccccCcceeEEEecccc-eeEEEeeccceeeeeeeccccceEEEecc-
Confidence            2222221  1234788999999997776432      233665665433 33333333445688999999987888766 


Q ss_pred             CCCCeEEEEECCCC-cEEEEe--------eCCCCEEEEEECCCCCeEEEEEecCCCcEEEEECCCCc
Q 014934          355 TADRCIRFWNTTTN-THLSCM--------DTGSQVCNLVWSKNVNELVSTHGYSQNQIIVWRYPTMS  412 (415)
Q Consensus       355 ~~d~~I~iwd~~t~-~~~~~~--------~~~~~V~~l~~s~~~~~l~s~~g~~dg~I~vw~~~s~~  412 (415)
                       ..+.|..|++... ......        ........+++..+|+..++  ....+.|.+|+ +.++
T Consensus       197 -~~~~I~~~d~~~~g~~~~~~~~~~~~~~~~~~~PdGl~vD~~G~l~Va--~~~~g~V~~~~-p~G~  259 (319)
T d2dg1a1         197 -TANRLHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCIDSDDNLYVA--MYGQGRVLVFN-KRGY  259 (319)
T ss_dssp             -GGTEEEEEEECTTSSSEEEEEEEEEEECCSSSEEEEEEEBTTCCEEEE--EETTTEEEEEC-TTSC
T ss_pred             -cCCceEEEEEcCCCceeccccceeeeccCCccceeeeeEcCCCCEEEE--EcCCCEEEEEC-CCCc
Confidence             6889999997642 221111        11223568999999998777  45688999998 4554


No 64 
>d2ghsa1 b.68.6.1 (A:20-314) Regucalcin {Agrobacterium tumefaciens [TaxId: 358]}
Probab=98.61  E-value=6.8e-05  Score=67.49  Aligned_cols=217  Identities=11%  Similarity=0.040  Sum_probs=142.2

Q ss_pred             eEeecCC--CcEEEEE-cCCeEEEEECCCCCeEEeEecCCCCCeEEEEEcCCCCeEEEEECCCcEEEEECCCCeeeEEec
Q 014934          171 NLVDWSS--HNVLAVG-LGNCVYLWNACSSKVTKLCDLGIDDSVCSVGWANRNTHLAVGTSHGKVQIWDASRCKRVRTME  247 (415)
Q Consensus       171 ~~l~ws~--~~~la~~-~d~~V~iwd~~~~~~~~~~~~~~~~~V~~v~~sp~g~~la~g~~dg~V~iwd~~~~~~~~~l~  247 (415)
                      ....|++  +.+.-+- ..+.|+.||..+++.. .+.+  ...+.++++.++|.+++ ++.+ .|.++|..+++......
T Consensus        21 Egp~wd~~~~~l~wvDi~~~~I~r~d~~~g~~~-~~~~--~~~~~~i~~~~dg~l~v-a~~~-gl~~~d~~tg~~~~l~~   95 (295)
T d2ghsa1          21 EGPTFDPASGTAWWFNILERELHELHLASGRKT-VHAL--PFMGSALAKISDSKQLI-ASDD-GLFLRDTATGVLTLHAE   95 (295)
T ss_dssp             EEEEEETTTTEEEEEEGGGTEEEEEETTTTEEE-EEEC--SSCEEEEEEEETTEEEE-EETT-EEEEEETTTCCEEEEEC
T ss_pred             eCCeEECCCCEEEEEECCCCEEEEEECCCCeEE-EEEC--CCCcEEEEEecCCCEEE-EEeC-ccEEeecccceeeEEee
Confidence            3566886  4454444 4689999999988754 3433  45789999999987665 4555 48899999886543322


Q ss_pred             --C--CCccEEEEEee--CCEEEEEeC----CCcEEEEECCCCCccEEEeccccCCeEEEEEeCCCCEEEE-EeCCCcEE
Q 014934          248 --G--HRLRVGALAWS--SSLLSSGSR----DKSILQRDIRAQEDFVSKLSGHKSEVCGLKWSYDNRELAS-GGNDNRLF  316 (415)
Q Consensus       248 --~--h~~~V~~l~~~--~~~l~sgs~----dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~spdg~~las-g~~dg~I~  316 (415)
                        .  ....+..+.+.  +++.++...    .+.-.+|.+..+.  +..+...-..-.+++|+++++.|.. -+..+.|+
T Consensus        96 ~~~~~~~~~~nd~~vd~~G~iw~~~~~~~~~~~~g~l~~~~~g~--~~~~~~~~~~~Ng~~~s~d~~~l~~~dt~~~~I~  173 (295)
T d2ghsa1          96 LESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVAKGK--VTKLFADISIPNSICFSPDGTTGYFVDTKVNRLM  173 (295)
T ss_dssp             SSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEETTE--EEEEEEEESSEEEEEECTTSCEEEEEETTTCEEE
T ss_pred             eecCCCcccceeeEECCCCCEEEEeccccccccceeEeeecCCc--EEEEeeccCCcceeeecCCCceEEEeecccceee
Confidence              1  22357777776  344443322    2334556655543  2233333345688999999987654 45677899


Q ss_pred             EEECCCC------ce--eEEeccCCCcEEEEEEcCCCCcEEEEEcCCCCCeEEEEECCCCcEEEEeeCC-CCEEEEEEC-
Q 014934          317 VWNQHST------QP--VLKYCEHTAAVKAIAWSPHLHGLLASGGGTADRCIRFWNTTTNTHLSCMDTG-SQVCNLVWS-  386 (415)
Q Consensus       317 iwd~~~~------~~--~~~~~~h~~~V~~l~~sp~~~~llasggg~~d~~I~iwd~~t~~~~~~~~~~-~~V~~l~~s-  386 (415)
                      .|++...      +.  ...+.+..+....+++..+|+ |.++.-  ..+.|..|| ..|+.+..+... ..+++++|- 
T Consensus       174 ~~~~d~~~~~~~~~~~~~~~~~~~~g~pdG~~vD~~Gn-lWva~~--~~g~V~~~d-p~G~~~~~i~lP~~~~T~~~FGG  249 (295)
T d2ghsa1         174 RVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGH-IWNARW--GEGAVDRYD-TDGNHIARYEVPGKQTTCPAFIG  249 (295)
T ss_dssp             EEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSC-EEEEEE--TTTEEEEEC-TTCCEEEEEECSCSBEEEEEEES
T ss_pred             EeeecccccccccceEEEeccCcccccccceEEcCCCC-EEeeee--CCCceEEec-CCCcEeeEecCCCCceEEEEEeC
Confidence            8886421      11  122334556688999999997 555432  367899999 578899998864 569999995 


Q ss_pred             CCCCeEEEEEec
Q 014934          387 KNVNELVSTHGY  398 (415)
Q Consensus       387 ~~~~~l~s~~g~  398 (415)
                      ++.+.|..|++.
T Consensus       250 ~d~~~LyvTta~  261 (295)
T d2ghsa1         250 PDASRLLVTSAR  261 (295)
T ss_dssp             TTSCEEEEEEBC
T ss_pred             CCCCEEEEEECC
Confidence            788888776553


No 65 
>d1rwia_ b.68.9.1 (A:) Serine/threonine-protein kinase PknD {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=98.55  E-value=9.8e-06  Score=71.64  Aligned_cols=191  Identities=8%  Similarity=0.001  Sum_probs=123.3

Q ss_pred             eeEeecCC-CcEEEEEcCC-eEEEEECCCCCeEEeEecCCCCCeEEEEEcCCCCeEEEEECCCcEEEEECCCCeeeEEec
Q 014934          170 LNLVDWSS-HNVLAVGLGN-CVYLWNACSSKVTKLCDLGIDDSVCSVGWANRNTHLAVGTSHGKVQIWDASRCKRVRTME  247 (415)
Q Consensus       170 i~~l~ws~-~~~la~~~d~-~V~iwd~~~~~~~~~~~~~~~~~V~~v~~sp~g~~la~g~~dg~V~iwd~~~~~~~~~l~  247 (415)
                      ...+++++ ++++++...+ .+++++..+...  ...........++++.++|+++++-..+..+..++...........
T Consensus        59 p~gvav~~~g~i~v~d~~~~~i~~~~~~~~~~--~~~~~~~~~p~~iavd~~g~i~v~d~~~~~~~~~~~~~~~~~~~~~  136 (260)
T d1rwia_          59 PQGLAVDGAGTVYVTDFNNRVVTLAAGSNNQT--VLPFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPF  136 (260)
T ss_dssp             CCCEEECTTCCEEEEETTTEEEEECTTCSCCE--ECCCCSCCSEEEEEECTTCCEEEEEGGGTEEEEECTTCSSCEECCC
T ss_pred             ceEEEEcCCCCEEEeeeeeceeeeeeecccee--eeeeeeeeecccccccccceeEeeccccccccccccccceeeeeee
Confidence            45667777 6666666554 455554433332  2322334678999999999987776666677777765433222111


Q ss_pred             CCCccEEEEEee--CCEEEEEeCCCcEEEEECCCCCccEEEeccccCCeEEEEEeCCCCEEEEEeCCCcEEEEECCCCce
Q 014934          248 GHRLRVGALAWS--SSLLSSGSRDKSILQRDIRAQEDFVSKLSGHKSEVCGLKWSYDNRELASGGNDNRLFVWNQHSTQP  325 (415)
Q Consensus       248 ~h~~~V~~l~~~--~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~spdg~~lasg~~dg~I~iwd~~~~~~  325 (415)
                      .......+++++  ++++++...++.|..+|...... ............+|++.++|+++++....+.|..++......
T Consensus       137 ~~~~~p~~i~~~~~g~~~v~~~~~~~i~~~d~~~~~~-~~~~~~~~~~p~gi~~d~~g~l~vsd~~~~~i~~~~~~~~~~  215 (260)
T d1rwia_         137 TGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQ-VVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTS  215 (260)
T ss_dssp             CSCCSCCEEEECTTCCEEEEEGGGTEEEEECTTTCCE-EECCCSSCCSEEEEEECTTCCEEEEETTTTEEEEECTTCSCC
T ss_pred             cccCCcceeeecCCCCEeeecccccccccccccccee-eeeeccccCCCccceeeeeeeeeeeecCCCEEEEEeCCCCeE
Confidence            222334567776  57777778888899999876542 222234456678999999999988888888999888755432


Q ss_pred             eEEeccCCCcEEEEEEcCCCCcEEEEEcCCCCCeEEEEECC
Q 014934          326 VLKYCEHTAAVKAIAWSPHLHGLLASGGGTADRCIRFWNTT  366 (415)
Q Consensus       326 ~~~~~~h~~~V~~l~~sp~~~~llasggg~~d~~I~iwd~~  366 (415)
                      .......-....+|++.++|. |+++-.  .++.|+.++..
T Consensus       216 ~~~~~~~~~~P~~i~~d~~g~-l~vad~--~~~rI~~i~~~  253 (260)
T d1rwia_         216 TVLPFTGLNTPLAVAVDSDRT-VYVADR--GNDRVVKLTSL  253 (260)
T ss_dssp             EECCCCSCCCEEEEEECTTCC-EEEEEG--GGTEEEEECCC
T ss_pred             EEEccCCCCCeEEEEEeCCCC-EEEEEC--CCCEEEEEeCC
Confidence            222123335678999999986 777655  46777766554


No 66 
>d1xfda1 b.70.3.1 (A:127-591) Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.55  E-value=2.5e-06  Score=82.46  Aligned_cols=219  Identities=13%  Similarity=0.103  Sum_probs=133.6

Q ss_pred             ecCC-CcEEEEEcCCeEEEEECCCCCeEEeEecCC--CCCeEEEEEcCCCCeEEEEEC---------CCcEEEEECCCCe
Q 014934          174 DWSS-HNVLAVGLGNCVYLWNACSSKVTKLCDLGI--DDSVCSVGWANRNTHLAVGTS---------HGKVQIWDASRCK  241 (415)
Q Consensus       174 ~ws~-~~~la~~~d~~V~iwd~~~~~~~~~~~~~~--~~~V~~v~~sp~g~~la~g~~---------dg~V~iwd~~~~~  241 (415)
                      .|.+ +.++....++.|.+||+.+++...++....  .-.+....|||||++++....         .|.+.++|+.++.
T Consensus        23 ~W~~~~~~~~~~~~g~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~SpD~~~vl~~~~~~~~~r~s~~~~~~i~d~~~~~  102 (465)
T d1xfda1          23 KWISDTEFIYREQKGTVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGD  102 (465)
T ss_dssp             CBSSSSCBCCCCSSSCEEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCC
T ss_pred             EEeCCCcEEEEeCCCcEEEEECCCCCEEEEEcCccccccccceeEECCCCCeEEEEEcccceeEeeccccEEEEEccCCc
Confidence            4666 344444456789999999988765554321  235778889999999888743         5678999998876


Q ss_pred             eeEE--ecCCCccEEEEEee--CCEEEEEeCCCcEEEEECCCCCccEEEeccccCCe-----------------EEEEEe
Q 014934          242 RVRT--MEGHRLRVGALAWS--SSLLSSGSRDKSILQRDIRAQEDFVSKLSGHKSEV-----------------CGLKWS  300 (415)
Q Consensus       242 ~~~~--l~~h~~~V~~l~~~--~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V-----------------~~l~~s  300 (415)
                      ....  .......+....|+  ++.|+-.. ++.|++.+...+.....+..+....|                 .++.||
T Consensus       103 ~~~l~~~~~~~~~l~~~~wSPDG~~iafv~-~~nl~~~~~~~~~~~~lt~~g~~~~i~nG~~d~vyeee~~~~~~a~~WS  181 (465)
T d1xfda1         103 PQSLDPPEVSNAKLQYAGWGPKGQQLIFIF-ENNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWS  181 (465)
T ss_dssp             CEECCCTTCCSCCCSBCCBCSSTTCEEEEE-TTEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEEC
T ss_pred             eeeccCccCCccccceeeeccCCceEEEEe-cceEEEEecCCCceEEEecccCcceeeccccchhhhhhhccccceEEEC
Confidence            4332  22234455567787  45665543 66788888876653222222222222                 478899


Q ss_pred             CCCCEEEEEeCC-C---------------------------------cEEEEECCCCceeEEec------cCCCcEEEEE
Q 014934          301 YDNRELASGGND-N---------------------------------RLFVWNQHSTQPVLKYC------EHTAAVKAIA  340 (415)
Q Consensus       301 pdg~~lasg~~d-g---------------------------------~I~iwd~~~~~~~~~~~------~h~~~V~~l~  340 (415)
                      |||++||....| .                                 .+.|+|+.++.......      .....+..+.
T Consensus       182 PDgk~iaf~~~D~s~V~~~~~~~~~~~~~p~~~~~~Yp~~G~~np~~~l~v~d~~~~~~~~~~~~~~~~~~~~~y~~~~~  261 (465)
T d1xfda1         182 PDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPPDDPRMREYYITMVK  261 (465)
T ss_dssp             TTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCCCCGGGSSEEEEEEE
T ss_pred             CCCCeEEEEEecccccceeecccccccccceeeeeeccccCCCCCceeEEEEecCCCcEEEEEeccCcCccccceeeeeE
Confidence            999999986422 2                                 24455554433221111      1222467899


Q ss_pred             EcCCCCcEEEEEcCC-CCCeEEEEECCCCcEEEEee--CCCC----EEEEEECCCCCeEE
Q 014934          341 WSPHLHGLLASGGGT-ADRCIRFWNTTTNTHLSCMD--TGSQ----VCNLVWSKNVNELV  393 (415)
Q Consensus       341 ~sp~~~~llasggg~-~d~~I~iwd~~t~~~~~~~~--~~~~----V~~l~~s~~~~~l~  393 (415)
                      |+|+++.++...... ....|.++|..+|++...+.  ....    -....|+++|+.++
T Consensus       262 W~~d~~~~~~~~nR~q~~~~i~~~d~~tg~~~~~~~e~~~~wv~~~~~~p~~~~dg~~~~  321 (465)
T d1xfda1         262 WATSTKVAVTWLNRAQNVSILTLCDATTGVCTKKHEDESEAWLHRQNEEPVFSKDGRKFF  321 (465)
T ss_dssp             ESSSSEEEEEEEETTSCEEEEEEEETTTCCEEEEEEEECSSCCCCCCCCCEECTTSCSEE
T ss_pred             EcCCCeEEEEEEccccccceEEEEcCCCCcEEEEEEEcCCceEeccCCceeEccCCCeeE
Confidence            999987444433311 22468899999998765443  2222    23468999998654


No 67 
>d1q7fa_ b.68.9.1 (A:) Brain tumor cg10719-pa {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=98.54  E-value=2.8e-05  Score=69.30  Aligned_cols=183  Identities=11%  Similarity=0.136  Sum_probs=129.8

Q ss_pred             CcEEEEEc--CCeEEEEECCCCCeEEeEecCCCCCeEEEEEcCCCCeEEEEECCCcEEEEECCCCeeeEEe--cCCCccE
Q 014934          178 HNVLAVGL--GNCVYLWNACSSKVTKLCDLGIDDSVCSVGWANRNTHLAVGTSHGKVQIWDASRCKRVRTM--EGHRLRV  253 (415)
Q Consensus       178 ~~~la~~~--d~~V~iwd~~~~~~~~~~~~~~~~~V~~v~~sp~g~~la~g~~dg~V~iwd~~~~~~~~~l--~~h~~~V  253 (415)
                      +..+++..  .+.|..++. .++....+..........+++.++|.++++....+.+.+++.. ++.+..+  ..+....
T Consensus        82 ~~~~~~~~~~~~~i~~~~~-~g~~~~~~~~~~~~~p~~~avd~~G~i~v~~~~~~~~~~~~~~-g~~~~~~g~~~~~~~~  159 (279)
T d1q7fa_          82 GDIIVTERSPTHQIQIYNQ-YGQFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQN-GNVLHKFGCSKHLEFP  159 (279)
T ss_dssp             TEEEEEECGGGCEEEEECT-TSCEEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEEECTTTCSSE
T ss_pred             cccceeccCCccccccccc-cccceeecCCCcccccceeccccCCcEEEEeeccceeeEeccC-Cceeeccccccccccc
Confidence            44555442  357777775 4565555544555678899999999988887777888888854 5556655  3455677


Q ss_pred             EEEEee--CCEEEEEeCCCcEEEEECCCCCccEEEec--cccCCeEEEEEeCCCCEEEEEeC-CCcEEEEECCCCceeEE
Q 014934          254 GALAWS--SSLLSSGSRDKSILQRDIRAQEDFVSKLS--GHKSEVCGLKWSYDNRELASGGN-DNRLFVWNQHSTQPVLK  328 (415)
Q Consensus       254 ~~l~~~--~~~l~sgs~dg~I~iwd~~~~~~~~~~~~--~h~~~V~~l~~spdg~~lasg~~-dg~I~iwd~~~~~~~~~  328 (415)
                      ..+++.  ++++++....+.|++||....  .+..+.  +......+|++.++|+++++-.. ++.|.+|+. +++.+..
T Consensus       160 ~~i~~d~~g~i~v~d~~~~~V~~~d~~G~--~~~~~g~~g~~~~P~giavD~~G~i~Vad~~~~~~v~~f~~-~G~~~~~  236 (279)
T d1q7fa_         160 NGVVVNDKQEIFISDNRAHCVKVFNYEGQ--YLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQ-DGQLISA  236 (279)
T ss_dssp             EEEEECSSSEEEEEEGGGTEEEEEETTCC--EEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECT-TSCEEEE
T ss_pred             ceeeeccceeEEeeeccccceeeeecCCc--eeeeecccccccCCcccccccCCeEEEEECCCCcEEEEECC-CCCEEEE
Confidence            788877  467777788889999997543  344442  34456789999999998877543 457999984 6777766


Q ss_pred             ecc--CCCcEEEEEEcCCCCcEEEEEcCCCCCeEEEEECCCCc
Q 014934          329 YCE--HTAAVKAIAWSPHLHGLLASGGGTADRCIRFWNTTTNT  369 (415)
Q Consensus       329 ~~~--h~~~V~~l~~sp~~~~llasggg~~d~~I~iwd~~t~~  369 (415)
                      +..  .......|++.|+|. |+++.   .+..|++|......
T Consensus       237 ~~~~~~~~~p~~vav~~dG~-l~V~~---~n~~v~~fr~~~~~  275 (279)
T d1q7fa_         237 LESKVKHAQCFDVALMDDGS-VVLAS---KDYRLYIYRYVQLA  275 (279)
T ss_dssp             EEESSCCSCEEEEEEETTTE-EEEEE---TTTEEEEEECSCCC
T ss_pred             EeCCCCCCCEeEEEEeCCCc-EEEEe---CCCeEEEEEeeeec
Confidence            643  234578999999986 66655   47899999987654


No 68 
>d1k32a2 b.68.7.1 (A:39-319) Tricorn protease N-terminal domain {Archaeon Thermoplasma acidophilum [TaxId: 2303]}
Probab=98.51  E-value=1.8e-05  Score=69.65  Aligned_cols=222  Identities=7%  Similarity=-0.005  Sum_probs=123.4

Q ss_pred             CcEEEEEcCCeEEEEECCCCCeEEeEecCCCCCeEEEEEcCCCCeEEEEEC-CC-----cEEEEECCCCeeeEEecC---
Q 014934          178 HNVLAVGLGNCVYLWNACSSKVTKLCDLGIDDSVCSVGWANRNTHLAVGTS-HG-----KVQIWDASRCKRVRTMEG---  248 (415)
Q Consensus       178 ~~~la~~~d~~V~iwd~~~~~~~~~~~~~~~~~V~~v~~sp~g~~la~g~~-dg-----~V~iwd~~~~~~~~~l~~---  248 (415)
                      ++.||...++.|++.|+.+++..++.  .+.+.+...+|||||++||.... ++     .|.+++..+++.......   
T Consensus        12 G~~v~f~~~~dl~~~d~~~g~~~~Lt--~~~~~~~~p~~SPDG~~iaf~~~~~~~~~~~~i~~~~~~~g~~~~lt~~~~~   89 (281)
T d1k32a2          12 GDRIIFVCCDDLWEHDLKSGSTRKIV--SNLGVINNARFFPDGRKIAIRVMRGSSLNTADLYFYNGENGEIKRITYFSGK   89 (281)
T ss_dssp             TTEEEEEETTEEEEEETTTCCEEEEE--CSSSEEEEEEECTTSSEEEEEEEESTTCCEEEEEEEETTTTEEEECCCCCEE
T ss_pred             CCEEEEEeCCcEEEEECCCCCEEEEe--cCCCcccCEEECCCCCEEEEEEeeCCCCCceEEEEEEecCCceEEeeecCCC
Confidence            56777777889999999999987765  45577899999999999987643 22     377777777765432211   


Q ss_pred             ---CCccEEEEEee--CCEEEEEeCC------CcEEEEECCCCCccEEEeccccCCeEEEEEeCCCCEEEEEeCCC----
Q 014934          249 ---HRLRVGALAWS--SSLLSSGSRD------KSILQRDIRAQEDFVSKLSGHKSEVCGLKWSYDNRELASGGNDN----  313 (415)
Q Consensus       249 ---h~~~V~~l~~~--~~~l~sgs~d------g~I~iwd~~~~~~~~~~~~~h~~~V~~l~~spdg~~lasg~~dg----  313 (415)
                         .........|+  ++.|+.....      ..+...+.....  ....  +......+.+.+.+..++....+.    
T Consensus        90 ~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~~~~--~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~  165 (281)
T d1k32a2          90 STGRRMFTDVAGFDPDGNLIISTDAMQPFSSMTCLYRVENDGIN--FVPL--NLGPATHILFADGRRVIGRNTFELPHWK  165 (281)
T ss_dssp             EETTEECSEEEEECTTCCEEEEECTTSSSTTCCEEEEEEGGGTE--EEEC--CSCSCSEEEEETTEEEEEESCSCCTTST
T ss_pred             ccCccccccccccCCCCCEEEEEEccCCCccceeeeeecCCCce--eEEe--cCCccceeeecCCCeEEEeeccccceee
Confidence               11233456676  4555554322      123444444332  2221  222233333333333333322211    


Q ss_pred             -------cEEEEECCCCceeEEeccCCCcEEEEEEcCCCCcEEEEEcCCCCCeEEEEECCCCcEEEEeeCCCCEEEEEEC
Q 014934          314 -------RLFVWNQHSTQPVLKYCEHTAAVKAIAWSPHLHGLLASGGGTADRCIRFWNTTTNTHLSCMDTGSQVCNLVWS  386 (415)
Q Consensus       314 -------~I~iwd~~~~~~~~~~~~h~~~V~~l~~sp~~~~llasggg~~d~~I~iwd~~t~~~~~~~~~~~~V~~l~~s  386 (415)
                             ...++....... .....+........++++  .++..........|.++|+.+++...... ........|+
T Consensus       166 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~d~~g~~~~~lt~-~~~~~~~~~S  241 (281)
T d1k32a2         166 GYRGGTRGKIWIEVNSGAF-KKIVDMSTHVSSPVIVGH--RIYFITDIDGFGQIYSTDLDGKDLRKHTS-FTDYYPRHLN  241 (281)
T ss_dssp             TCCSTTCCEEEEEEETTEE-EEEECCSSCCEEEEEETT--EEEEEECTTSSCEEEEEETTSCSCEECCC-CCSSCEEEEE
T ss_pred             eeccCCcceeeeeccccce-eeccCCccccceeeeecc--ccceecccccccceEEEeCCCCceEEeec-CCCcccccCc
Confidence                   111222222222 222234444555666665  34444432235568888988776544322 2222335689


Q ss_pred             CCCCeEEEEEecCCCcEEEEECCCCc
Q 014934          387 KNVNELVSTHGYSQNQIIVWRYPTMS  412 (415)
Q Consensus       387 ~~~~~l~s~~g~~dg~I~vw~~~s~~  412 (415)
                      |||+.|+..   .++.|+++|+.+++
T Consensus       242 pDG~~I~f~---~~~~l~~~d~~~g~  264 (281)
T d1k32a2         242 TDGRRILFS---KGGSIYIFNPDTEK  264 (281)
T ss_dssp             ESSSCEEEE---ETTEEEEECTTTCC
T ss_pred             CCCCEEEEE---eCCEEEEEECCCCC
Confidence            999999874   35789999988765


No 69 
>d1pjxa_ b.68.6.1 (A:) Diisopropylfluorophosphatase (phosphotriesterase, DFP) {Squid (Loligo vulgaris) [TaxId: 6622]}
Probab=98.45  E-value=2.3e-05  Score=71.36  Aligned_cols=193  Identities=10%  Similarity=0.135  Sum_probs=126.7

Q ss_pred             eeEeecCC-CcEEEEE-cCCeEEEEECCCCCeEEeEecCCCC----CeEEEEEcCCCCeEEEEEC---------------
Q 014934          170 LNLVDWSS-HNVLAVG-LGNCVYLWNACSSKVTKLCDLGIDD----SVCSVGWANRNTHLAVGTS---------------  228 (415)
Q Consensus       170 i~~l~ws~-~~~la~~-~d~~V~iwd~~~~~~~~~~~~~~~~----~V~~v~~sp~g~~la~g~~---------------  228 (415)
                      -+.+.+++ ++.|.++ ..+.|..++..++....... ...+    ....+++.++|.+.++-..               
T Consensus        73 P~Gl~~~~dg~~l~vad~~~~i~~~~~~g~~~~~~~~-~~~g~~~~~pndl~~d~~G~lyvtd~~~~~~~~~~~~~~~~~  151 (314)
T d1pjxa_          73 PAGCQCDRDANQLFVADMRLGLLVVQTDGTFEEIAKK-DSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEK  151 (314)
T ss_dssp             EEEEEECSSSSEEEEEETTTEEEEEETTSCEEECCSB-CTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSS
T ss_pred             ceeEEEeCCCCEEEEEECCCeEEEEeCCCcEEEEEec-cccccccCCCcEEEECCCCCEEEecCccCcccccccceeccC
Confidence            46788888 5655555 45678889976654332222 2111    3578999999987765321               


Q ss_pred             CCcEEEEECCCCeeeEEecCCCccEEEEEeeC--C-----EEEEEeCCCcEEEEECCCCCccE-----EEecc-ccCCeE
Q 014934          229 HGKVQIWDASRCKRVRTMEGHRLRVGALAWSS--S-----LLSSGSRDKSILQRDIRAQEDFV-----SKLSG-HKSEVC  295 (415)
Q Consensus       229 dg~V~iwd~~~~~~~~~l~~h~~~V~~l~~~~--~-----~l~sgs~dg~I~iwd~~~~~~~~-----~~~~~-h~~~V~  295 (415)
                      .|.|..++.. ++..... ..-..-+.++|++  +     ++++-+..+.|..||+.......     ..+.+ +.....
T Consensus       152 ~G~v~~~~~d-g~~~~~~-~~~~~pNGi~~~~d~d~~~~~lyv~d~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~~pd  229 (314)
T d1pjxa_         152 FGSIYCFTTD-GQMIQVD-TAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGAD  229 (314)
T ss_dssp             CEEEEEECTT-SCEEEEE-EEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEE
T ss_pred             CceEEEEeec-CceeEee-CCcceeeeeEECCCCCcceeEEEEEeecccceEEeeccCccccceeeEEEEccccccccce
Confidence            2334444432 3322222 2223346778862  2     44555678889999886543221     11111 223457


Q ss_pred             EEEEeCCCCEEEEEeCCCcEEEEECCCCceeEEeccCCCcEEEEEEcCCCCcEEEEEcCCCCCeEEEEECCC
Q 014934          296 GLKWSYDNRELASGGNDNRLFVWNQHSTQPVLKYCEHTAAVKAIAWSPHLHGLLASGGGTADRCIRFWNTTT  367 (415)
Q Consensus       296 ~l~~spdg~~lasg~~dg~I~iwd~~~~~~~~~~~~h~~~V~~l~~sp~~~~llasggg~~d~~I~iwd~~t  367 (415)
                      +|++..+|+++++....+.|.+||...++.+..+..+...+.+++|.|+++.|+++.+  .++.|..+++..
T Consensus       230 GiavD~~GnlyVa~~~~g~I~~~dp~~g~~~~~i~~p~~~~t~~afg~d~~~lyVt~~--~~g~i~~~~~~~  299 (314)
T d1pjxa_         230 GMDFDEDNNLLVANWGSSHIEVFGPDGGQPKMRIRCPFEKPSNLHFKPQTKTIFVTEH--ENNAVWKFEWQR  299 (314)
T ss_dssp             EEEEBTTCCEEEEEETTTEEEEECTTCBSCSEEEECSSSCEEEEEECTTSSEEEEEET--TTTEEEEEECSS
T ss_pred             eeEEecCCcEEEEEcCCCEEEEEeCCCCEEEEEEECCCCCEEEEEEeCCCCEEEEEEC--CCCcEEEEECCC
Confidence            8999999999888888899999999888877777766778899999999887888876  688888888753


No 70 
>d1xfda1 b.70.3.1 (A:127-591) Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.40  E-value=5.9e-05  Score=72.51  Aligned_cols=244  Identities=13%  Similarity=0.152  Sum_probs=140.1

Q ss_pred             eeEeecCC-CcEEEEEcCCeEEEEECCCCCeEEeEecCCCCCe-----------------EEEEEcCCCCeEEEEEC-CC
Q 014934          170 LNLVDWSS-HNVLAVGLGNCVYLWNACSSKVTKLCDLGIDDSV-----------------CSVGWANRNTHLAVGTS-HG  230 (415)
Q Consensus       170 i~~l~ws~-~~~la~~~d~~V~iwd~~~~~~~~~~~~~~~~~V-----------------~~v~~sp~g~~la~g~~-dg  230 (415)
                      +....||| ++.||...++.|++.+..++...++..-+..+.|                 .++-|||||++||.... +.
T Consensus       116 l~~~~wSPDG~~iafv~~~nl~~~~~~~~~~~~lt~~g~~~~i~nG~~d~vyeee~~~~~~a~~WSPDgk~iaf~~~D~s  195 (465)
T d1xfda1         116 LQYAGWGPKGQQLIFIFENNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDS  195 (465)
T ss_dssp             CSBCCBCSSTTCEEEEETTEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECT
T ss_pred             cceeeeccCCceEEEEecceEEEEecCCCceEEEecccCcceeeccccchhhhhhhccccceEEECCCCCeEEEEEeccc
Confidence            45678999 8899999999999999988877766643322222                 46789999999998753 22


Q ss_pred             cE---------------------------------EEEECCCCeeeEEec------CCCccEEEEEeeC-CEEEEE--eC
Q 014934          231 KV---------------------------------QIWDASRCKRVRTME------GHRLRVGALAWSS-SLLSSG--SR  268 (415)
Q Consensus       231 ~V---------------------------------~iwd~~~~~~~~~l~------~h~~~V~~l~~~~-~~l~sg--s~  268 (415)
                      .|                                 .++|+..+.......      .....+..+.|.+ ..++..  .+
T Consensus       196 ~V~~~~~~~~~~~~~p~~~~~~Yp~~G~~np~~~l~v~d~~~~~~~~~~~~~~~~~~~~~y~~~~~W~~d~~~~~~~~nR  275 (465)
T d1xfda1         196 RVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNR  275 (465)
T ss_dssp             TSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEET
T ss_pred             ccceeecccccccccceeeeeeccccCCCCCceeEEEEecCCCcEEEEEeccCcCccccceeeeeEEcCCCeEEEEEEcc
Confidence            23                                 334443332111110      1223467788873 333322  33


Q ss_pred             CC---cEEEEECCCCCccEEEec-cccCCe----EEEEEeCCCCEEEE--Ee-CCC--cEEEEECC------CCceeEEe
Q 014934          269 DK---SILQRDIRAQEDFVSKLS-GHKSEV----CGLKWSYDNRELAS--GG-NDN--RLFVWNQH------STQPVLKY  329 (415)
Q Consensus       269 dg---~I~iwd~~~~~~~~~~~~-~h~~~V----~~l~~spdg~~las--g~-~dg--~I~iwd~~------~~~~~~~~  329 (415)
                      +.   .|.++|..++.. ..... .....|    ....|++||+.++.  .+ .+|  .++..++.      .++.+..+
T Consensus       276 ~q~~~~i~~~d~~tg~~-~~~~~e~~~~wv~~~~~~p~~~~dg~~~~fi~~se~~g~~~ly~~~~~~~~~~~~~~~~~~L  354 (465)
T d1xfda1         276 AQNVSILTLCDATTGVC-TKKHEDESEAWLHRQNEEPVFSKDGRKFFFIRAIPQGGRGKFYHITVSSSQPNSSNDNIQSI  354 (465)
T ss_dssp             TSCEEEEEEEETTTCCE-EEEEEEECSSCCCCCCCCCEECTTSCSEEEEEEECCSSSSCEEEEEEECSSCCSSSCCCCBS
T ss_pred             ccccceEEEEcCCCCcE-EEEEEEcCCceEeccCCceeEccCCCeeEEEEeeeecccCceEEEEeccccccCCCceeEEe
Confidence            32   478889888763 22222 122212    34578999985432  22 222  34444321      23333444


Q ss_pred             ccCCCcEEEE-EEcCCCCcEEEEEcCCC--CCeEEEEECCCCcEEEEee----CCCCEEEEEECCCCCeEEEEEecC-CC
Q 014934          330 CEHTAAVKAI-AWSPHLHGLLASGGGTA--DRCIRFWNTTTNTHLSCMD----TGSQVCNLVWSKNVNELVSTHGYS-QN  401 (415)
Q Consensus       330 ~~h~~~V~~l-~~sp~~~~llasggg~~--d~~I~iwd~~t~~~~~~~~----~~~~V~~l~~s~~~~~l~s~~g~~-dg  401 (415)
                      ....-.|..+ +|...++.++.++.+..  ...|.-.++..+....++.    .......+.|||++++++.++.+. --
T Consensus       355 T~G~w~V~~i~~~d~~~~~vyF~a~~~~p~~~hly~v~l~g~~~~~~lt~~~~~~~~~~~~~~S~~~~y~v~~~s~~~~P  434 (465)
T d1xfda1         355 TSGDWDVTKILAYDEKGNKIYFLSTEDLPRRRQLYSANTVGNFNRQCLSCDLVENCTYFSASFSHSMDFFLLKCEGPGVP  434 (465)
T ss_dssp             CCSSSCEEEEEEEETTTTEEEEEESSSCTTCCEEEEECSSTTCCCBCSSTTSSSSCCCCEEEECTTSSEEEEECCSSSSC
T ss_pred             ccCCceEEEEEEEcCCCCEEEEEEeCCCCCceEEEEEECCCCCcceeeccccCCCCCEEEEEECCCCCEEEEEeecCCCC
Confidence            4444456664 68998887877764211  2334444554443333222    234567899999999998754332 24


Q ss_pred             cEEEEECCCCccc
Q 014934          402 QIIVWRYPTMSKV  414 (415)
Q Consensus       402 ~I~vw~~~s~~~l  414 (415)
                      .+.+++..+++++
T Consensus       435 ~~~~~~~~~~~~~  447 (465)
T d1xfda1         435 MVTVHNTTDKKKM  447 (465)
T ss_dssp             CEEEEETTTCCEE
T ss_pred             eEEEEECCCCCEE
Confidence            6778887776654


No 71 
>d2ghsa1 b.68.6.1 (A:20-314) Regucalcin {Agrobacterium tumefaciens [TaxId: 358]}
Probab=98.29  E-value=0.00025  Score=63.61  Aligned_cols=182  Identities=10%  Similarity=0.093  Sum_probs=126.4

Q ss_pred             ceeEeecCC-CcEEEEEcCCeEEEEECCCCCeEEeEecCC---CCCeEEEEEcCCCCeEEEEEC----CCcEEEEECCCC
Q 014934          169 YLNLVDWSS-HNVLAVGLGNCVYLWNACSSKVTKLCDLGI---DDSVCSVGWANRNTHLAVGTS----HGKVQIWDASRC  240 (415)
Q Consensus       169 ~i~~l~ws~-~~~la~~~d~~V~iwd~~~~~~~~~~~~~~---~~~V~~v~~sp~g~~la~g~~----dg~V~iwd~~~~  240 (415)
                      .+.++.+.+ ++++++ ....|+++|..+++...+.....   ...+..+.+.++|++.++...    .+.-.+|.+..+
T Consensus        60 ~~~~i~~~~dg~l~va-~~~gl~~~d~~tg~~~~l~~~~~~~~~~~~nd~~vd~~G~iw~~~~~~~~~~~~g~l~~~~~g  138 (295)
T d2ghsa1          60 MGSALAKISDSKQLIA-SDDGLFLRDTATGVLTLHAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVAKG  138 (295)
T ss_dssp             CEEEEEEEETTEEEEE-ETTEEEEEETTTCCEEEEECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEETT
T ss_pred             CcEEEEEecCCCEEEE-EeCccEEeecccceeeEEeeeecCCCcccceeeEECCCCCEEEEeccccccccceeEeeecCC
Confidence            356777777 555554 46789999999999877765422   235788999999986665432    234566776666


Q ss_pred             eeeEEecCCCccEEEEEeeC--C-EEEEEeCCCcEEEEECCCCC------c-cEEEeccccCCeEEEEEeCCCCEEEEEe
Q 014934          241 KRVRTMEGHRLRVGALAWSS--S-LLSSGSRDKSILQRDIRAQE------D-FVSKLSGHKSEVCGLKWSYDNRELASGG  310 (415)
Q Consensus       241 ~~~~~l~~h~~~V~~l~~~~--~-~l~sgs~dg~I~iwd~~~~~------~-~~~~~~~h~~~V~~l~~spdg~~lasg~  310 (415)
                      +....+.. -.....++|++  + ++++-+..+.|..+++....      . ......+......++++..+|++.++.-
T Consensus       139 ~~~~~~~~-~~~~Ng~~~s~d~~~l~~~dt~~~~I~~~~~d~~~~~~~~~~~~~~~~~~~~g~pdG~~vD~~GnlWva~~  217 (295)
T d2ghsa1         139 KVTKLFAD-ISIPNSICFSPDGTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARW  217 (295)
T ss_dssp             EEEEEEEE-ESSEEEEEECTTSCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEE
T ss_pred             cEEEEeec-cCCcceeeecCCCceEEEeecccceeeEeeecccccccccceEEEeccCcccccccceEEcCCCCEEeeee
Confidence            65444432 33456788873  3 55666778889999875322      1 1122233445678999999999888877


Q ss_pred             CCCcEEEEECCCCceeEEeccCCCcEEEEEEc-CCCCcEEEEEc
Q 014934          311 NDNRLFVWNQHSTQPVLKYCEHTAAVKAIAWS-PHLHGLLASGG  353 (415)
Q Consensus       311 ~dg~I~iwd~~~~~~~~~~~~h~~~V~~l~~s-p~~~~llasgg  353 (415)
                      ..+.|..||. +++.+..+.-....+++++|- |+.+.|+++..
T Consensus       218 ~~g~V~~~dp-~G~~~~~i~lP~~~~T~~~FGG~d~~~LyvTta  260 (295)
T d2ghsa1         218 GEGAVDRYDT-DGNHIARYEVPGKQTTCPAFIGPDASRLLVTSA  260 (295)
T ss_dssp             TTTEEEEECT-TCCEEEEEECSCSBEEEEEEESTTSCEEEEEEB
T ss_pred             CCCceEEecC-CCcEeeEecCCCCceEEEEEeCCCCCEEEEEEC
Confidence            8889999995 688888887666789999996 67777888764


No 72 
>d1npea_ b.68.5.1 (A:) Nidogen {Mouse (Mus musculus) [TaxId: 10090]}
Probab=98.17  E-value=0.0018  Score=56.77  Aligned_cols=227  Identities=6%  Similarity=-0.045  Sum_probs=143.9

Q ss_pred             cEEEEEcCCeEEEEECCCCCeE-----EeEecCCCCCeEEEEEcCCCCeEEEEE-CCCcEEEEECCCCeeeEEecCCCcc
Q 014934          179 NVLAVGLGNCVYLWNACSSKVT-----KLCDLGIDDSVCSVGWANRNTHLAVGT-SHGKVQIWDASRCKRVRTMEGHRLR  252 (415)
Q Consensus       179 ~~la~~~d~~V~iwd~~~~~~~-----~~~~~~~~~~V~~v~~sp~g~~la~g~-~dg~V~iwd~~~~~~~~~l~~h~~~  252 (415)
                      .+|..+..+.|+-.+++.....     .... .+...+.+|+|.+..+.|.... .++.|+..++........+......
T Consensus         2 ~fLl~s~~~~I~~~~ld~~~~~~~~~~~~~~-~~~~~~~~ld~D~~~~~iywsd~~~~~I~~~~l~g~~~~~v~~~~~~~   80 (263)
T d1npea_           2 THLLFAQTGKIERLPLERNTMKKTEAKAFLH-IPAKVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDLGS   80 (263)
T ss_dssp             EEEEEEEEEEEEEEEESSSCBCGGGCEEEEE-EEEEEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTCCC
T ss_pred             CEEEEeCCCeEEEEECCCccccccccccccc-cCCCcEEEEEEEeCCCEEEEEECCCCeEEEEEcccCCcEEEEEecccc
Confidence            4577777778877777554321     1111 2234578899998777666654 4577888888765554445444456


Q ss_pred             EEEEEee--CCEEE-EEeCCCcEEEEECCCCCccEEEeccccCCeEEEEEeCCCCEEEEEeC---CCcEEEEECCCCcee
Q 014934          253 VGALAWS--SSLLS-SGSRDKSILQRDIRAQEDFVSKLSGHKSEVCGLKWSYDNRELASGGN---DNRLFVWNQHSTQPV  326 (415)
Q Consensus       253 V~~l~~~--~~~l~-sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~spdg~~lasg~~---dg~I~iwd~~~~~~~  326 (415)
                      +.+|+++  ++.|. +-...+.|.+.++..... ............+++++|...+|.....   ...|.--++......
T Consensus        81 p~~iAvD~~~~~lY~~d~~~~~I~~~~~dg~~~-~~l~~~~l~~p~~l~vdp~~g~ly~t~~~~~~~~I~r~~~dG~~~~  159 (263)
T d1npea_          81 PEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQR-RVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNRR  159 (263)
T ss_dssp             EEEEEEETTTTEEEEEETTTTEEEEEETTSCSC-EEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCCCE
T ss_pred             ccEEEEeccCCeEEEeccCCCEEEEEecCCceE-EEEecccccCCcEEEEecccCcEEEeecCCCCcEEEEecCCCCCce
Confidence            7777775  55554 555677899999986652 2333333467899999997777664432   233555566544333


Q ss_pred             EEeccCCCcEEEEEEcCCCCcEEEEEcCCCCCeEEEEECCCCcEEEEeeCCCCEEEEEECCCCCeEEEEEecCCCcEEEE
Q 014934          327 LKYCEHTAAVKAIAWSPHLHGLLASGGGTADRCIRFWNTTTNTHLSCMDTGSQVCNLVWSKNVNELVSTHGYSQNQIIVW  406 (415)
Q Consensus       327 ~~~~~h~~~V~~l~~sp~~~~llasggg~~d~~I~iwd~~t~~~~~~~~~~~~V~~l~~s~~~~~l~s~~g~~dg~I~vw  406 (415)
                      ......-....+|++.+.+..|+.+-.  ..+.|...|+........+.......++++.  +..|..+ -...+.|...
T Consensus       160 ~i~~~~~~~P~glaiD~~~~~lYw~d~--~~~~I~~~~~~g~~~~~v~~~~~~P~~lav~--~~~lYwt-d~~~~~I~~~  234 (263)
T d1npea_         160 ILAQDNLGLPNGLTFDAFSSQLCWVDA--GTHRAECLNPAQPGRRKVLEGLQYPFAVTSY--GKNLYYT-DWKTNSVIAM  234 (263)
T ss_dssp             EEECTTCSCEEEEEEETTTTEEEEEET--TTTEEEEEETTEEEEEEEEECCCSEEEEEEE--TTEEEEE-ETTTTEEEEE
T ss_pred             eeeeecccccceEEEeecCcEEEEEeC--CCCEEEEEECCCCCeEEEECCCCCcEEEEEE--CCEEEEE-ECCCCEEEEE
Confidence            333334456789999988887878765  5789999999765544334433445677775  4555554 3456788887


Q ss_pred             ECCCCc
Q 014934          407 RYPTMS  412 (415)
Q Consensus       407 ~~~s~~  412 (415)
                      +..+++
T Consensus       235 ~~~~g~  240 (263)
T d1npea_         235 DLAISK  240 (263)
T ss_dssp             ETTTTE
T ss_pred             ECCCCc
Confidence            776654


No 73 
>d1ijqa1 b.68.5.1 (A:377-642) Low density lipoprotein (LDL) receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.99  E-value=0.0042  Score=54.37  Aligned_cols=225  Identities=10%  Similarity=-0.066  Sum_probs=141.5

Q ss_pred             EEEEEcCCeEEEEECCCCCeEEeEecCCCCCeEEEEEcCCCCeEEEEE-CCCcEEEEECCCCe----eeEEecCCCccEE
Q 014934          180 VLAVGLGNCVYLWNACSSKVTKLCDLGIDDSVCSVGWANRNTHLAVGT-SHGKVQIWDASRCK----RVRTMEGHRLRVG  254 (415)
Q Consensus       180 ~la~~~d~~V~iwd~~~~~~~~~~~~~~~~~V~~v~~sp~g~~la~g~-~dg~V~iwd~~~~~----~~~~l~~h~~~V~  254 (415)
                      +|..+....|+..++.+.+...+.  .....+.+++|.+..+.|.... ..+.|.-.++....    ....+......+.
T Consensus         3 fLl~s~~~~I~~~~l~~~~~~~~~--~~~~~~~~id~d~~~~~lYw~D~~~~~I~~~~l~~~~~~~~~~~~~~~~~~~p~   80 (266)
T d1ijqa1           3 YLFFTNRHEVRKMTLDRSEYTSLI--PNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPD   80 (266)
T ss_dssp             EEEEECBSSEEEEETTSCCCEEEE--CSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCC
T ss_pred             EEEEECCCeEEEEECCCCcceeee--CCCCceEEEEEEeCCCEEEEEECCCCEEEEEEecCCCCCcceEEEEeCCCCCcc
Confidence            466776778999999887766665  3456788999998877776654 45566666654311    1122222233444


Q ss_pred             EEEee--CC-EEEEEeCCCcEEEEECCCCCccEEEeccccCCeEEEEEeCCCCEEEEEe--CCCcEEEEECCCCceeEEe
Q 014934          255 ALAWS--SS-LLSSGSRDKSILQRDIRAQEDFVSKLSGHKSEVCGLKWSYDNRELASGG--NDNRLFVWNQHSTQPVLKY  329 (415)
Q Consensus       255 ~l~~~--~~-~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~spdg~~lasg~--~dg~I~iwd~~~~~~~~~~  329 (415)
                      +|+++  ++ +.++-...+.|.+.++.... ....+........+|+++|...+|....  ..+.|.-.++.........
T Consensus        81 glAvD~~~~~lY~~d~~~~~I~v~~~~g~~-~~~~~~~~~~~P~~l~vd~~~g~ly~~~~~~~~~I~r~~~dGs~~~~l~  159 (266)
T d1ijqa1          81 GLAVDWIHSNIYWTDSVLGTVSVADTKGVK-RKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLV  159 (266)
T ss_dssp             EEEEETTTTEEEEEETTTTEEEEEETTSSS-EEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEE
T ss_pred             eEEEeeccceEEEEecCCCEEEeEecCCce-EEEEEcCCCCCcceEEEEcccCeEEEeccCCCcceeEeccCCCceeccc
Confidence            55554  44 45555567789999998765 3334444556789999999666655433  3456777777554443333


Q ss_pred             ccCCCcEEEEEEcCCCCcEEEEEcCCCCCeEEEEECCCCcEEEEeeC---CCCEEEEEECCCCCeEEEEEecCCCcEEEE
Q 014934          330 CEHTAAVKAIAWSPHLHGLLASGGGTADRCIRFWNTTTNTHLSCMDT---GSQVCNLVWSKNVNELVSTHGYSQNQIIVW  406 (415)
Q Consensus       330 ~~h~~~V~~l~~sp~~~~llasggg~~d~~I~iwd~~t~~~~~~~~~---~~~V~~l~~s~~~~~l~s~~g~~dg~I~vw  406 (415)
                      ...-....++++.+.+..|+.+-.  ..+.|...++........+..   .....++++.  +..|..+ -..++.|...
T Consensus       160 ~~~~~~p~gl~iD~~~~~lYw~d~--~~~~I~~~~~dG~~~~~~~~~~~~~~~p~~lav~--~~~ly~t-d~~~~~I~~~  234 (266)
T d1ijqa1         160 TENIQWPNGITLDLLSGRLYWVDS--KLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVF--EDKVFWT-DIINEAIFSA  234 (266)
T ss_dssp             CSSCSCEEEEEEETTTTEEEEEET--TTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEE--TTEEEEE-ETTTTEEEEE
T ss_pred             ccccceeeEEEeeccccEEEEecC--CcCEEEEEECCCCCEEEEEeCCCcccccEEEEEE--CCEEEEE-ECCCCeEEEE
Confidence            344466789999998888888866  678999999876544333322   2345667776  3445553 3456777777


Q ss_pred             ECCCCc
Q 014934          407 RYPTMS  412 (415)
Q Consensus       407 ~~~s~~  412 (415)
                      +..+++
T Consensus       235 ~~~~g~  240 (266)
T d1ijqa1         235 NRLTGS  240 (266)
T ss_dssp             ETTTCC
T ss_pred             ECCCCc
Confidence            665543


No 74 
>d1fwxa2 b.69.3.1 (A:8-451) Nitrous oxide reductase, N-terminal domain {Paracoccus denitrificans [TaxId: 266]}
Probab=97.98  E-value=0.0024  Score=59.22  Aligned_cols=185  Identities=12%  Similarity=0.118  Sum_probs=120.3

Q ss_pred             CCCeEEEEE-CCCcEEEEECCCCeeeEEecC-CCccEEEEEee----CCEEEEEeCCC------------------cEEE
Q 014934          219 RNTHLAVGT-SHGKVQIWDASRCKRVRTMEG-HRLRVGALAWS----SSLLSSGSRDK------------------SILQ  274 (415)
Q Consensus       219 ~g~~la~g~-~dg~V~iwd~~~~~~~~~l~~-h~~~V~~l~~~----~~~l~sgs~dg------------------~I~i  274 (415)
                      ||++|++.. .++.|.+.|+.+.++...+.- ....+..+...    -.+++.++.+.                  .+..
T Consensus        98 DGrylFVNDkan~RVAvIdl~~fkt~kIi~iPn~~~~HG~r~~~~p~T~YV~~~~e~~vP~pndg~~l~d~~~y~~~~t~  177 (459)
T d1fwxa2          98 DGRFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFTA  177 (459)
T ss_dssp             EEEEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGG-EEEEEEE
T ss_pred             ceeEEEEEcCCCceEEEEECcceeeeEEEecCCCCCCceeecccCCCeEEEEccCccccccCCCCccccchhhcceEEEE
Confidence            788888876 578899999999987664432 33445555543    35777776633                  2567


Q ss_pred             EECCCCCccEEEeccccCCeEEEEEeCCCCEEEEEeCCC---------------cEEEE---------------------
Q 014934          275 RDIRAQEDFVSKLSGHKSEVCGLKWSYDNRELASGGNDN---------------RLFVW---------------------  318 (415)
Q Consensus       275 wd~~~~~~~~~~~~~h~~~V~~l~~spdg~~lasg~~dg---------------~I~iw---------------------  318 (415)
                      +|..+.+...+..  -.+....+.++++|+++++.+.+.               .+.++                     
T Consensus       178 ID~~tm~V~~QV~--V~g~ld~~~~s~dGK~af~TsyNSE~g~~l~e~ta~e~D~i~V~n~~rie~av~~Gk~~eingV~  255 (459)
T d1fwxa2         178 VDADKWEVAWQVL--VSGNLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVK  255 (459)
T ss_dssp             EETTTTEEEEEEE--ESSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEE
T ss_pred             EecCCceEEEEee--eCCChhccccCCCCCEEEEEeccccCCcchhhcccccceEEEEechHHhHHhhhcCCcEEeCCce
Confidence            8888776322222  234677899999999988876431               13333                     


Q ss_pred             --ECCC--CceeEEeccCCCcEEEEEEcCCCCcEEEEEcCCCCCeEEEEECCCC------------cEEEEeeCCCCEEE
Q 014934          319 --NQHS--TQPVLKYCEHTAAVKAIAWSPHLHGLLASGGGTADRCIRFWNTTTN------------THLSCMDTGSQVCN  382 (415)
Q Consensus       319 --d~~~--~~~~~~~~~h~~~V~~l~~sp~~~~llasggg~~d~~I~iwd~~t~------------~~~~~~~~~~~V~~  382 (415)
                        |.+.  +..+..+-.-......+..+|||+++++++.  .+.++.++|++.-            ........+-.-..
T Consensus       256 VVD~~~~~~~~v~~yIPVpKsPHGV~vSPDGKyi~VaGK--Ls~tVSViD~~Ki~~~~~~~~~~~~~~~~e~elglgPLh  333 (459)
T d1fwxa2         256 VVDGRKEASSLFTRYIPIANNPHGCNMAPDKKHLCVAGK--LSPTVTVLDVTRFDAVFYENADPRSAVVAEPELGLGPLH  333 (459)
T ss_dssp             EEECSGG--CSSEEEEEEESSCCCEEECTTSSEEEEECT--TSSBEEEEEGGGHHHHHHSCC-GGGGEEECCBCCSCEEE
T ss_pred             eecccccCCcceeEEEecCCCCCceEECCCCCEEEEeCC--cCCcEEEEEehhhhhhhcccCCccccEEeecccCcCccc
Confidence              3322  1111111111223456899999999988886  8999999999631            12233345666788


Q ss_pred             EEECCCCCeEEEEEecCCCcEEEEECC
Q 014934          383 LVWSKNVNELVSTHGYSQNQIIVWRYP  409 (415)
Q Consensus       383 l~~s~~~~~l~s~~g~~dg~I~vw~~~  409 (415)
                      .+|+..|+...+  -+-|.+|.-|++.
T Consensus       334 t~fd~~g~ayts--lfids~v~kw~~~  358 (459)
T d1fwxa2         334 TAFDGRGNAYTS--LFLDSQVVKWNIE  358 (459)
T ss_dssp             EEECTTSEEEEE--ETTTTEEEEEEHH
T ss_pred             cccCCCceEEEE--eeccceEEEEecc
Confidence            999998853333  6889999999984


No 75 
>d1utca2 b.69.6.1 (A:4-330) Clathrin heavy-chain terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=97.77  E-value=0.01  Score=52.07  Aligned_cols=228  Identities=10%  Similarity=0.075  Sum_probs=149.0

Q ss_pred             CCcEEEEEc----CCeEEEEECCCCCeEEeEecCCCCCeEEEEEcCCCCeEEEEECCCcEEEEECCCCeeeEEecCCCcc
Q 014934          177 SHNVLAVGL----GNCVYLWNACSSKVTKLCDLGIDDSVCSVGWANRNTHLAVGTSHGKVQIWDASRCKRVRTMEGHRLR  252 (415)
Q Consensus       177 ~~~~la~~~----d~~V~iwd~~~~~~~~~~~~~~~~~V~~v~~sp~g~~la~g~~dg~V~iwd~~~~~~~~~l~~h~~~  252 (415)
                      +++++++-.    ...|.|.|+.............    -+.-.+|..+.||.-+ ..+++|+|+++.+.+..+.- ...
T Consensus        31 SDkyicVRe~~~~~~~VvIidl~n~~~~~Rrpi~A----dsAIMhP~~~IiALra-g~~LQiFnletK~klks~~~-~e~  104 (327)
T d1utca2          31 SDKFICIREKVGEQAQVVIIDMNDPSNPIRRPISA----DSAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTM-TDD  104 (327)
T ss_dssp             SSSEEEEEEEETTEEEEEEEETTSTTSCEEEECCC----SEEEECSSSSEEEEEE-TTEEEEEETTTTEEEEEEEC-SSC
T ss_pred             cCCEEEEEeccCCCceEEEEECCCCCcceecccch----hhhhcCCCCcEEEEec-CCeEEEEehhHhhhhceEEc-CCC
Confidence            355666542    2478999987765333332222    2344578888888766 55899999999988888773 456


Q ss_pred             EEEEEee-CCEEEEEeCCCcEEEEECCCCCccEEEecccc----CCeEEEEEeCCCCEEEEEe---C----CCcEEEEEC
Q 014934          253 VGALAWS-SSLLSSGSRDKSILQRDIRAQEDFVSKLSGHK----SEVCGLKWSYDNRELASGG---N----DNRLFVWNQ  320 (415)
Q Consensus       253 V~~l~~~-~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~----~~V~~l~~spdg~~lasg~---~----dg~I~iwd~  320 (415)
                      |.--.|- ++.|+-.+ +..|+.|+++....+.+.+..|.    ..|-.-..++++++++..|   .    .|.+.+|..
T Consensus       105 VvfWkWis~~~L~lVT-~taVYHW~~~g~s~P~k~fdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~i~G~mQLYS~  183 (327)
T d1utca2         105 VTFWKWISLNTVALVT-DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSV  183 (327)
T ss_dssp             CCEEEESSSSEEEEEC-SSEEEEEESSSSCCCEEEEECCGGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEET
T ss_pred             cEEEEecCCCEEEEEc-CCceEEEcccCCCCchhhhhhcccccCceEEEEEECCCCCEEEEEeEecCCCceeEEEEEEEe
Confidence            7666775 66666664 55699999977666777777664    3577778889999987643   2    356888887


Q ss_pred             CCCceeEEeccCCCcEEEEEEcCCC--CcEEEEEc-CCCCCeEEEEECCCCc----E--EEEee-------CCCCEEEEE
Q 014934          321 HSTQPVLKYCEHTAAVKAIAWSPHL--HGLLASGG-GTADRCIRFWNTTTNT----H--LSCMD-------TGSQVCNLV  384 (415)
Q Consensus       321 ~~~~~~~~~~~h~~~V~~l~~sp~~--~~llasgg-g~~d~~I~iwd~~t~~----~--~~~~~-------~~~~V~~l~  384 (415)
                      +.+ .-+.+++|.+....+...-..  ..+++-+. +...+.+++.++....    .  .+..+       .+..-.++.
T Consensus       184 er~-~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~~~kLhIiEig~~~~g~~~f~kk~vdi~fppea~~DFPvamq  262 (327)
T d1utca2         184 DRK-VSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQ  262 (327)
T ss_dssp             TTT-EEEEECCSEEEEEEECCTTCSSCEEEEEEEEEETTEEEEEEEECSCCCTTCCCCCCEEEECCCCTTCTTCCEEEEE
T ss_pred             ccC-cCccccceeeeeEEEEcCCCCCCceEEEEEECCCCCcEEEEEEcCCCccCCCCCcceeEEEECCccccCCcEEEEE
Confidence            654 456778887666555443221  12443332 1234788898886521    1  11221       234566788


Q ss_pred             ECCCCCeEEEEEecCCCcEEEEECCCCccc
Q 014934          385 WSKNVNELVSTHGYSQNQIIVWRYPTMSKV  414 (415)
Q Consensus       385 ~s~~~~~l~s~~g~~dg~I~vw~~~s~~~l  414 (415)
                      .++....+..  -..-|-|++||+.++..+
T Consensus       263 vs~kygiiyv--iTK~G~i~lyDleTgt~i  290 (327)
T d1utca2         263 ISEKHDVVFL--ITKYGYIHLYDLETGTCI  290 (327)
T ss_dssp             EETTTTEEEE--EETTSEEEEEETTTCCEE
T ss_pred             eeccCCEEEE--EecCcEEEEEEcccccEE
Confidence            8887777666  357899999999998765


No 76 
>d2ad6a1 b.70.1.1 (A:1-571) Methanol dehydrogenase, heavy chain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}
Probab=97.43  E-value=0.014  Score=56.81  Aligned_cols=237  Identities=10%  Similarity=0.030  Sum_probs=134.3

Q ss_pred             ecCCCcEEEEEcCCeEEEEECCCCCeEEeEecCC---CCCeEEEEEcCCCCeEEEEEC------CCcEEEEECCCCeeeE
Q 014934          174 DWSSHNVLAVGLGNCVYLWNACSSKVTKLCDLGI---DDSVCSVGWANRNTHLAVGTS------HGKVQIWDASRCKRVR  244 (415)
Q Consensus       174 ~ws~~~~la~~~d~~V~iwd~~~~~~~~~~~~~~---~~~V~~v~~sp~g~~la~g~~------dg~V~iwd~~~~~~~~  244 (415)
                      ++..+.+++...++.|+-.|.++|+......+..   ...+++--...+ ..++++..      .|.|.-+|+.+++.+-
T Consensus       112 a~~~~~i~~~~~~g~l~alda~tG~~~w~~~~~~~~~~~~~t~~p~v~~-~~vivg~~~~~~~~~G~v~a~D~~TG~~~W  190 (571)
T d2ad6a1         112 AYGAGQIVKKQANGHLLALDAKTGKINWEVEVCDPKVGSTLTQAPFVAK-DTVLMGCSGAELGVRGAVNAFDLKTGELKW  190 (571)
T ss_dssp             EEETTEEEEECTTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEET-TEEEEECBCGGGTCCCEEEEEETTTCCEEE
T ss_pred             eeeCCeEEEEeCCCcEEeeehhhhhhhccccccccccccceeecCeEeC-CeEEEeeccccccccCcEEEEECCCCcEEE
Confidence            3444667777788999999999999876654321   111221111113 34555553      6789999999998876


Q ss_pred             EecCCC-------------------------------------ccEE-EEEee--CCEEEEEeC----------------
Q 014934          245 TMEGHR-------------------------------------LRVG-ALAWS--SSLLSSGSR----------------  268 (415)
Q Consensus       245 ~l~~h~-------------------------------------~~V~-~l~~~--~~~l~sgs~----------------  268 (415)
                      .+....                                     +.+. ..+.+  ..+++.+..                
T Consensus       191 ~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gg~vW~~~s~D~~~g~~y~~tg~~~p~~~~~r~g~n~~  270 (571)
T d2ad6a1         191 RAFATGSDDSVRLAKDFNSANPHYGQFGLGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSGNPAPWNETMRPGDNKW  270 (571)
T ss_dssp             EEESSSCHHHHTBCTTTTTTCGGGCCSSHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTT
T ss_pred             EEeccCCcccccccccccccccccCcccccccccCCcccccCCCccccccccchhcCeeeeecccccCcccccccccccc
Confidence            543210                                     0110 11112  244444433                


Q ss_pred             CCcEEEEECCCCCccEEEeccccC---------CeEEEEEeCCCC---EEEEEeCCCcEEEEECCCCceeEEeccCC---
Q 014934          269 DKSILQRDIRAQEDFVSKLSGHKS---------EVCGLKWSYDNR---ELASGGNDNRLFVWNQHSTQPVLKYCEHT---  333 (415)
Q Consensus       269 dg~I~iwd~~~~~~~~~~~~~h~~---------~V~~l~~spdg~---~lasg~~dg~I~iwd~~~~~~~~~~~~h~---  333 (415)
                      ...+.-.|+++++. +-.++.+..         ......+..+++   .++.++.+|.++++|..+++++.......   
T Consensus       271 s~svvAld~~TG~~-~W~~q~~~~D~Wd~D~~~~~~l~~~~~~g~~~~~v~~~~k~G~l~vlDr~tG~~i~~~~~~~~~~  349 (571)
T d2ad6a1         271 TMTIWGRDLDTGMA-KWGYQKTPHDEWDFAGVNQMVLTDQPVNGKMTPLLSHIDRNGILYTLNRENGNLIVAEKVDPAVN  349 (571)
T ss_dssp             TTEEEEEETTTCCE-EEEEESSTTCSSCCCCCCCCEEEEEEETTEEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCC
T ss_pred             ccceeeeeccchhh-eecccccCccccccccccccceeeeeccCccccceeeccccceEEEEecCCCcEeeeeccCCccc
Confidence            24577788888873 333332111         111122233444   46778899999999999998875421100   


Q ss_pred             ----------------------------------CcE--EEEEEcCCCCcEEEEEc------------------------
Q 014934          334 ----------------------------------AAV--KAIAWSPHLHGLLASGG------------------------  353 (415)
Q Consensus       334 ----------------------------------~~V--~~l~~sp~~~~llasgg------------------------  353 (415)
                                                        +..  ...+++|....+++-..                        
T Consensus       350 ~~~~~~~~~~~~i~~~~~~~~~~~~g~~~~p~~~Gg~~w~~~a~dP~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~  429 (571)
T d2ad6a1         350 VFKKVDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGVDSYDPESRTLYAGLNHICMDWEPFMLPYRAGQFFVGATL  429 (571)
T ss_dssp             SEEEECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEE
T ss_pred             ccccccccccccccCcccccccccCceEEEeccccccccccceECCCCceEEEeccccccccccccccccCCccccccce
Confidence                                              000  11456666543332111                        


Q ss_pred             ----------CCCCCeEEEEECCCCcEEEEeeCCCCEEEEEECCCCCeEEEEEecCCCcEEEEECCCCccc
Q 014934          354 ----------GTADRCIRFWNTTTNTHLSCMDTGSQVCNLVWSKNVNELVSTHGYSQNQIIVWRYPTMSKV  414 (415)
Q Consensus       354 ----------g~~d~~I~iwd~~t~~~~~~~~~~~~V~~l~~s~~~~~l~s~~g~~dg~I~vw~~~s~~~l  414 (415)
                                ....|.|.-+|+.+|+.+..........+-..+..+..+++  |..||.++.+|..++++|
T Consensus       430 ~~~~~~~~~~~~~~G~l~AiD~~TG~~~W~~~~~~~~~~g~l~TagglVf~--G~~dg~l~A~Da~tGe~l  498 (571)
T d2ad6a1         430 AMYPGPNGPTKKEMGQIRAFDLTTGKAKWTKWEKFAAWGGTLYTKGGLVWY--ATLDGYLKALDNKDGKEL  498 (571)
T ss_dssp             EEEECTTSTTSCCCEEEEEECTTTCCEEEEEEESSCCCSBCEEETTTEEEE--ECTTSEEEEEETTTCCEE
T ss_pred             eeccccCCcccCCcccEEEeccCCCceeeEcCCCCCCCcceeEecCCEEEE--ECCCCeEEEEECCCCcEE
Confidence                      00125688899999998887765443322122224556666  789999999999999875


No 77 
>d1fwxa2 b.69.3.1 (A:8-451) Nitrous oxide reductase, N-terminal domain {Paracoccus denitrificans [TaxId: 266]}
Probab=97.40  E-value=0.033  Score=51.38  Aligned_cols=213  Identities=13%  Similarity=0.020  Sum_probs=134.3

Q ss_pred             CcEEEEE--cCCeEEEEECCCCCeEEeEecCCCCCeEEEEEcCC--CCeEEEEECC------------------CcEEEE
Q 014934          178 HNVLAVG--LGNCVYLWNACSSKVTKLCDLGIDDSVCSVGWANR--NTHLAVGTSH------------------GKVQIW  235 (415)
Q Consensus       178 ~~~la~~--~d~~V~iwd~~~~~~~~~~~~~~~~~V~~v~~sp~--g~~la~g~~d------------------g~V~iw  235 (415)
                      +++|.+.  .++.|.+.|+.+.++.++.++.....+..+...++  -.+++.++..                  +.+.++
T Consensus        99 GrylFVNDkan~RVAvIdl~~fkt~kIi~iPn~~~~HG~r~~~~p~T~YV~~~~e~~vP~pndg~~l~d~~~y~~~~t~I  178 (459)
T d1fwxa2          99 GRFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFTAV  178 (459)
T ss_dssp             EEEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGG-EEEEEEEE
T ss_pred             eeEEEEEcCCCceEEEEECcceeeeEEEecCCCCCCceeecccCCCeEEEEccCccccccCCCCccccchhhcceEEEEE
Confidence            4666666  35789999999999988888777778888887654  4577766653                  236678


Q ss_pred             ECCCCeeeEEecCCCccEEEEEee--CCEEEEEeCC--------------------------------------CcEEEE
Q 014934          236 DASRCKRVRTMEGHRLRVGALAWS--SSLLSSGSRD--------------------------------------KSILQR  275 (415)
Q Consensus       236 d~~~~~~~~~l~~h~~~V~~l~~~--~~~l~sgs~d--------------------------------------g~I~iw  275 (415)
                      |..+.+....+.- .+....++++  ++++++.+.+                                      +.+.+.
T Consensus       179 D~~tm~V~~QV~V-~g~ld~~~~s~dGK~af~TsyNSE~g~~l~e~ta~e~D~i~V~n~~rie~av~~Gk~~eingV~VV  257 (459)
T d1fwxa2         179 DADKWEVAWQVLV-SGNLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVKVV  257 (459)
T ss_dssp             ETTTTEEEEEEEE-SSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEEEE
T ss_pred             ecCCceEEEEeee-CCChhccccCCCCCEEEEEeccccCCcchhhcccccceEEEEechHHhHHhhhcCCcEEeCCceee
Confidence            8888776555431 1122333443  5666665533                                      123444


Q ss_pred             ECCCC--CccEEEeccccCCeEEEEEeCCCCEEEEEe-CCCcEEEEECCCCc-----------eeEEeccCCCcEEEEEE
Q 014934          276 DIRAQ--EDFVSKLSGHKSEVCGLKWSYDNRELASGG-NDNRLFVWNQHSTQ-----------PVLKYCEHTAAVKAIAW  341 (415)
Q Consensus       276 d~~~~--~~~~~~~~~h~~~V~~l~~spdg~~lasg~-~dg~I~iwd~~~~~-----------~~~~~~~h~~~V~~l~~  341 (415)
                      |.+..  ......+.. .....++..+|||+++++++ .+..+.|+|++.-.           .+..-....-.-..-+|
T Consensus       258 D~~~~~~~~v~~yIPV-pKsPHGV~vSPDGKyi~VaGKLs~tVSViD~~Ki~~~~~~~~~~~~~~~~e~elglgPLht~f  336 (459)
T d1fwxa2         258 DGRKEASSLFTRYIPI-ANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPELGLGPLHTAF  336 (459)
T ss_dssp             ECSGG--CSSEEEEEE-ESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCC-GGGGEEECCBCCSCEEEEEE
T ss_pred             cccccCCcceeEEEec-CCCCCceEECCCCCEEEEeCCcCCcEEEEEehhhhhhhcccCCccccEEeecccCcCcccccc
Confidence            44431  112222221 23356789999999987755 68899999986321           11111122233455688


Q ss_pred             cCCCCcEEEEEcCCCCCeEEEEECCC----------CcEEEEeeCCCCEEEEEE------CCCCCeEEEE
Q 014934          342 SPHLHGLLASGGGTADRCIRFWNTTT----------NTHLSCMDTGSQVCNLVW------SKNVNELVST  395 (415)
Q Consensus       342 sp~~~~llasggg~~d~~I~iwd~~t----------~~~~~~~~~~~~V~~l~~------s~~~~~l~s~  395 (415)
                      ...|. .+.|--  .|..|.-||+..          ...+..++...++-.+.-      .|+|++|++.
T Consensus       337 d~~g~-aytslf--ids~v~kw~~~~~~~~~~~~~~~~v~~k~~v~y~~gh~~~~~g~t~~~dgk~l~~~  403 (459)
T d1fwxa2         337 DGRGN-AYTSLF--LDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGETLDATNDWLVCL  403 (459)
T ss_dssp             CTTSE-EEEEET--TTTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEETTTTSTTCCSSEEEEE
T ss_pred             CCCce-EEEEee--ccceEEEEecchhhhhhccccCCcceeccccccCCCCCccCcCCcCCCCCCEEEEe
Confidence            88763 666665  799999999853          256677777777766643      5789999884


No 78 
>d1utca2 b.69.6.1 (A:4-330) Clathrin heavy-chain terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=97.29  E-value=0.049  Score=47.70  Aligned_cols=187  Identities=12%  Similarity=0.141  Sum_probs=125.1

Q ss_pred             eeEeecCCCcEEEEEcCCeEEEEECCCC-CeEEeEecCC---CCCeEEEEEcCCCCeEEEEEC-------CCcEEEEECC
Q 014934          170 LNLVDWSSHNVLAVGLGNCVYLWNACSS-KVTKLCDLGI---DDSVCSVGWANRNTHLAVGTS-------HGKVQIWDAS  238 (415)
Q Consensus       170 i~~l~ws~~~~la~~~d~~V~iwd~~~~-~~~~~~~~~~---~~~V~~v~~sp~g~~la~g~~-------dg~V~iwd~~  238 (415)
                      |.--.|-..+.|+.-.+..||-|+++.. ...+.++...   ...|..-..++++++++..+-       .|.+++|..+
T Consensus       105 VvfWkWis~~~L~lVT~taVYHW~~~g~s~P~k~fdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~i~G~mQLYS~e  184 (327)
T d1utca2         105 VTFWKWISLNTVALVTDNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVD  184 (327)
T ss_dssp             CCEEEESSSSEEEEECSSEEEEEESSSSCCCEEEEECCGGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETT
T ss_pred             cEEEEecCCCEEEEEcCCceEEEcccCCCCchhhhhhcccccCceEEEEEECCCCCEEEEEeEecCCCceeEEEEEEEec
Confidence            4455788889999999999999999543 4566665311   356777788889997766432       4778999987


Q ss_pred             CCeeeEEecCCCccEEEEEeeC-----CEEEEEe---CCCcEEEEECCCCCc---c-----EEEec---cccCCeEEEEE
Q 014934          239 RCKRVRTMEGHRLRVGALAWSS-----SLLSSGS---RDKSILQRDIRAQED---F-----VSKLS---GHKSEVCGLKW  299 (415)
Q Consensus       239 ~~~~~~~l~~h~~~V~~l~~~~-----~~l~sgs---~dg~I~iwd~~~~~~---~-----~~~~~---~h~~~V~~l~~  299 (415)
                      .. .-+.+++|.+....+...+     .+++-+.   ..+.+.+.++.....   .     +..+.   .-..---++..
T Consensus       185 r~-~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~~~kLhIiEig~~~~g~~~f~kk~vdi~fppea~~DFPvamqv  263 (327)
T d1utca2         185 RK-VSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQI  263 (327)
T ss_dssp             TT-EEEEECCSEEEEEEECCTTCSSCEEEEEEEEEETTEEEEEEEECSCCCTTCCCCCCEEEECCCCTTCTTCCEEEEEE
T ss_pred             cC-cCccccceeeeeEEEEcCCCCCCceEEEEEECCCCCcEEEEEEcCCCccCCCCCcceeEEEECCccccCCcEEEEEe
Confidence            64 4567888887777776653     2333332   235788888876321   0     11111   11233456888


Q ss_pred             eCCCCEEEEEeCCCcEEEEECCCCceeEEeccCCCcEEEEEEcCCCCcEEEEEcCCCCCeE
Q 014934          300 SYDNRELASGGNDNRLFVWNQHSTQPVLKYCEHTAAVKAIAWSPHLHGLLASGGGTADRCI  360 (415)
Q Consensus       300 spdg~~lasg~~dg~I~iwd~~~~~~~~~~~~h~~~V~~l~~sp~~~~llasggg~~d~~I  360 (415)
                      ++.-..+..-+.-|.|++||+.++.++..-+-....|...+-......+++..   .+|.|
T Consensus       264 s~kygiiyviTK~G~i~lyDleTgt~i~~nRIs~~~iF~~a~~~~~~Gi~~VN---r~GqV  321 (327)
T d1utca2         264 SEKHDVVFLITKYGYIHLYDLETGTCIYMNRISGETIFVTAPHEATAGIIGVN---RKGQV  321 (327)
T ss_dssp             ETTTTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEETTTTEEEEEE---TTSEE
T ss_pred             eccCCEEEEEecCcEEEEEEcccccEEEEeecCCCceEEeccCCCCceEEEEC---CCCeE
Confidence            88888899999999999999999999887655556666555555544555554   35544


No 79 
>d2ad6a1 b.70.1.1 (A:1-571) Methanol dehydrogenase, heavy chain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}
Probab=97.24  E-value=0.041  Score=53.37  Aligned_cols=208  Identities=11%  Similarity=0.007  Sum_probs=122.5

Q ss_pred             CCeEEEEECCCCCeEEeEecCC------------------------------------CCCe-EEEEEcCCCCeEEEEEC
Q 014934          186 GNCVYLWNACSSKVTKLCDLGI------------------------------------DDSV-CSVGWANRNTHLAVGTS  228 (415)
Q Consensus       186 d~~V~iwd~~~~~~~~~~~~~~------------------------------------~~~V-~~v~~sp~g~~la~g~~  228 (415)
                      .+.|+-+|+.+|+..-.+....                                    ...+ ...++.++...+..+..
T Consensus       175 ~G~v~a~D~~TG~~~W~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gg~vW~~~s~D~~~g~~y~~tg  254 (571)
T d2ad6a1         175 RGAVNAFDLKTGELKWRAFATGSDDSVRLAKDFNSANPHYGQFGLGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSG  254 (571)
T ss_dssp             CCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGCCSSHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECC
T ss_pred             cCcEEEEECCCCcEEEEEeccCCcccccccccccccccccCcccccccccCCcccccCCCccccccccchhcCeeeeecc
Confidence            4679999999999876553211                                    0111 22345566666665544


Q ss_pred             ----------------CCcEEEEECCCCeeeEEecCCC-----------ccEEEEEeeC---CEEEEEeCCCcEEEEECC
Q 014934          229 ----------------HGKVQIWDASRCKRVRTMEGHR-----------LRVGALAWSS---SLLSSGSRDKSILQRDIR  278 (415)
Q Consensus       229 ----------------dg~V~iwd~~~~~~~~~l~~h~-----------~~V~~l~~~~---~~l~sgs~dg~I~iwd~~  278 (415)
                                      ...+.-.|+++++.+-.++.+.           .....+..++   ..++.++.+|.+++.|..
T Consensus       255 ~~~p~~~~~r~g~n~~s~svvAld~~TG~~~W~~q~~~~D~Wd~D~~~~~~l~~~~~~g~~~~~v~~~~k~G~l~vlDr~  334 (571)
T d2ad6a1         255 NPAPWNETMRPGDNKWTMTIWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVLTDQPVNGKMTPLLSHIDRNGILYTLNRE  334 (571)
T ss_dssp             CCSCSCGGGSCSCCTTTTEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEEETTEEEEEEEEECTTSEEEEEETT
T ss_pred             cccCccccccccccccccceeeeeccchhheecccccCccccccccccccceeeeeccCccccceeeccccceEEEEecC
Confidence                            2457778999998876665321           1222333333   356788899999999988


Q ss_pred             CCCccEEEecc------------------------------------ccCC--eEEEEEeCCCCEEEEEeCC--------
Q 014934          279 AQEDFVSKLSG------------------------------------HKSE--VCGLKWSYDNRELASGGND--------  312 (415)
Q Consensus       279 ~~~~~~~~~~~------------------------------------h~~~--V~~l~~spdg~~lasg~~d--------  312 (415)
                      +++.....-..                                    ..+.  -...+++|+..++.....+        
T Consensus       335 tG~~i~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~g~~~~p~~~Gg~~w~~~a~dP~~~~~yv~~~~~~~~~~~~  414 (571)
T d2ad6a1         335 NGNLIVAEKVDPAVNVFKKVDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGVDSYDPESRTLYAGLNHICMDWEPF  414 (571)
T ss_dssp             TCCEEEEEESSTTCCSEEEECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEEC
T ss_pred             CCcEeeeeccCCcccccccccccccccccCcccccccccCceEEEeccccccccccceECCCCceEEEeccccccccccc
Confidence            87632110000                                    0000  0125677777776654433        


Q ss_pred             -----------------------------CcEEEEECCCCceeEEeccCCCcEEEEEEcCCCCcEEEEEcCCCCCeEEEE
Q 014934          313 -----------------------------NRLFVWNQHSTQPVLKYCEHTAAVKAIAWSPHLHGLLASGGGTADRCIRFW  363 (415)
Q Consensus       313 -----------------------------g~I~iwd~~~~~~~~~~~~h~~~V~~l~~sp~~~~llasggg~~d~~I~iw  363 (415)
                                                   |.|.-+|+.+++.+.+...-....... ..-.+. |+..+.  .|+.++-+
T Consensus       415 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~AiD~~TG~~~W~~~~~~~~~~g~-l~Tagg-lVf~G~--~dg~l~A~  490 (571)
T d2ad6a1         415 MLPYRAGQFFVGATLAMYPGPNGPTKKEMGQIRAFDLTTGKAKWTKWEKFAAWGGT-LYTKGG-LVWYAT--LDGYLKAL  490 (571)
T ss_dssp             CCCCCTTSCCCCEEEEEEECTTSTTSCCCEEEEEECTTTCCEEEEEEESSCCCSBC-EEETTT-EEEEEC--TTSEEEEE
T ss_pred             cccccCCccccccceeeccccCCcccCCcccEEEeccCCCceeeEcCCCCCCCcce-eEecCC-EEEEEC--CCCeEEEE
Confidence                                         357777888888776654211111111 111233 566565  89999999


Q ss_pred             ECCCCcEEEEeeCCCCEEE--EEECCCCCe-EEEEEe
Q 014934          364 NTTTNTHLSCMDTGSQVCN--LVWSKNVNE-LVSTHG  397 (415)
Q Consensus       364 d~~t~~~~~~~~~~~~V~~--l~~s~~~~~-l~s~~g  397 (415)
                      |.++|+.+.+++.+..+..  +.|..+|+. +++..|
T Consensus       491 Da~tGe~lW~~~l~~~~~a~P~ty~~dGkqYi~v~~g  527 (571)
T d2ad6a1         491 DNKDGKELWNFKMPSGGIGSPMTYSFKGKQYIGSMYG  527 (571)
T ss_dssp             ETTTCCEEEEEECSSCCCSCCEEEEETTEEEEEEEEC
T ss_pred             ECCCCcEEEEEECCCCceecceEEEECCEEEEEEEec
Confidence            9999999999986655443  666668864 444433


No 80 
>d1k32a2 b.68.7.1 (A:39-319) Tricorn protease N-terminal domain {Archaeon Thermoplasma acidophilum [TaxId: 2303]}
Probab=97.21  E-value=0.0013  Score=57.15  Aligned_cols=96  Identities=11%  Similarity=0.034  Sum_probs=69.8

Q ss_pred             EEeCC--CCEEEEEeCCCcEEEEECCCCceeEEeccCCCcEEEEEEcCCCCcEEEEEc-CCCC--CeEEEEECCCCcEEE
Q 014934          298 KWSYD--NRELASGGNDNRLFVWNQHSTQPVLKYCEHTAAVKAIAWSPHLHGLLASGG-GTAD--RCIRFWNTTTNTHLS  372 (415)
Q Consensus       298 ~~spd--g~~lasg~~dg~I~iwd~~~~~~~~~~~~h~~~V~~l~~sp~~~~llasgg-g~~d--~~I~iwd~~t~~~~~  372 (415)
                      .++||  |+.+|..+. +.|++.|+.+++.. .+..+.+.+...+|||||+.|+.+.. +..+  ..|.+++..+++..+
T Consensus         5 ~~sPdi~G~~v~f~~~-~dl~~~d~~~g~~~-~Lt~~~~~~~~p~~SPDG~~iaf~~~~~~~~~~~~i~~~~~~~g~~~~   82 (281)
T d1k32a2           5 LLNPDIHGDRIIFVCC-DDLWEHDLKSGSTR-KIVSNLGVINNARFFPDGRKIAIRVMRGSSLNTADLYFYNGENGEIKR   82 (281)
T ss_dssp             CEEEEEETTEEEEEET-TEEEEEETTTCCEE-EEECSSSEEEEEEECTTSSEEEEEEEESTTCCEEEEEEEETTTTEEEE
T ss_pred             ccCCCCCCCEEEEEeC-CcEEEEECCCCCEE-EEecCCCcccCEEECCCCCEEEEEEeeCCCCCceEEEEEEecCCceEE
Confidence            46788  999887654 56999999988754 56677788899999999998776542 1122  348888888887655


Q ss_pred             EeeCC-------CCEEEEEECCCCCeEEEE
Q 014934          373 CMDTG-------SQVCNLVWSKNVNELVST  395 (415)
Q Consensus       373 ~~~~~-------~~V~~l~~s~~~~~l~s~  395 (415)
                      .....       .......|+|+|+.|+.+
T Consensus        83 lt~~~~~~~~~~~~~~~~~~spdg~~l~~~  112 (281)
T d1k32a2          83 ITYFSGKSTGRRMFTDVAGFDPDGNLIIST  112 (281)
T ss_dssp             CCCCCEEEETTEECSEEEEECTTCCEEEEE
T ss_pred             eeecCCCccCccccccccccCCCCCEEEEE
Confidence            43221       235678999999998874


No 81 
>d1kv9a2 b.70.1.1 (A:1-560) Quinoprotein alcohol dehydrogenase, N-terminal domain {Pseudomonas putida, hk5 [TaxId: 303]}
Probab=97.07  E-value=0.11  Score=50.06  Aligned_cols=223  Identities=11%  Similarity=0.092  Sum_probs=131.9

Q ss_pred             CeEEEEECCCCCeEEeEecCCC-----------------------------CCe-EEEEEcCCCCeEEEEEC--------
Q 014934          187 NCVYLWNACSSKVTKLCDLGID-----------------------------DSV-CSVGWANRNTHLAVGTS--------  228 (415)
Q Consensus       187 ~~V~iwd~~~~~~~~~~~~~~~-----------------------------~~V-~~v~~sp~g~~la~g~~--------  228 (415)
                      +.|+-+|..+|+..-.+.....                             ..+ ..+.+.+...++..+..        
T Consensus       178 G~v~a~D~~TG~~~W~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~W~~~s~D~~~~l~y~~tgn~~~~~~~  257 (560)
T d1kv9a2         178 GFVSAYDADTGKLAWRFYTVPGDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNRE  257 (560)
T ss_dssp             CEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHH
T ss_pred             ceEEEEECCCceEEeeeeeccccccCCccccccccccccccccccccccCCCCcccccccccccCeeeecCCCCcccccc
Confidence            5699999999998776653211                             011 12345566665555432        


Q ss_pred             -----------CCcEEEEECCCCeeeEEecCCCc-----------cEEEEEeeC---CEEEEEeCCCcEEEEECCCCCcc
Q 014934          229 -----------HGKVQIWDASRCKRVRTMEGHRL-----------RVGALAWSS---SLLSSGSRDKSILQRDIRAQEDF  283 (415)
Q Consensus       229 -----------dg~V~iwd~~~~~~~~~l~~h~~-----------~V~~l~~~~---~~l~sgs~dg~I~iwd~~~~~~~  283 (415)
                                 ...|.-.|+++++.+-.++....           .+..+...+   ..++.++.+|.++++|-.+++..
T Consensus       258 ~~~~~~g~n~~s~sivAld~~tG~~~W~~Q~~~~D~wd~d~~~~~~l~~~~~~g~~~~~v~~~~k~G~~~~lDr~tG~~i  337 (560)
T d1kv9a2         258 VRSPGGGDNLYLSSILAIRPDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKLI  337 (560)
T ss_dssp             HHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEE
T ss_pred             cccccCCccccceeeEEecCCccceeEEEeccccccccccccceeeeeeeecCCceeeeeeecCccceEEEEecCCCccc
Confidence                       23467778888887655542211           122333333   46778899999999998887632


Q ss_pred             EEEecccc-----------------------------------CCeEEEEEeCCCCEEEEEeCC----------------
Q 014934          284 VSKLSGHK-----------------------------------SEVCGLKWSYDNRELASGGND----------------  312 (415)
Q Consensus       284 ~~~~~~h~-----------------------------------~~V~~l~~spdg~~lasg~~d----------------  312 (415)
                      ........                                   ..-...+++|+..++.....+                
T Consensus       338 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~dp~~~~~yvp~~~~~~~~~~~~~~~~~~~  417 (560)
T d1kv9a2         338 SAEKFGKVTWAEKVDLATGRPVEAPGVRYEKEPIVMWPSPFGAHNWHSMSFNPGTGLVYIPYQEVPGVYRNEGKDFVTRK  417 (560)
T ss_dssp             EEEESSCCCSEEEECTTTCCEEECTTTTCSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEECCCGGGCCCCS
T ss_pred             ccccccccccccccChhhccccccccccccccceeeeeccccccccccccccCCCCeeecccccccceeecccccccccc
Confidence            21111100                                   001245677777776654322                


Q ss_pred             --------------------CcEEEEECCCCceeEEeccCCCcEEEEEEcCCCCcEEEEEcCCCCCeEEEEECCCCcEEE
Q 014934          313 --------------------NRLFVWNQHSTQPVLKYCEHTAAVKAIAWSPHLHGLLASGGGTADRCIRFWNTTTNTHLS  372 (415)
Q Consensus       313 --------------------g~I~iwd~~~~~~~~~~~~h~~~V~~l~~sp~~~~llasggg~~d~~I~iwd~~t~~~~~  372 (415)
                                          |.|.-||+.+++.+.++... ....+-.+.-.+. |+..|.  .|+.++-+|..+|+.+.
T Consensus       418 ~~~~~~~~~~~~~~p~~~~~G~l~A~D~~tGk~~W~~~~~-~~~~gg~l~Tagg-lVF~G~--~dg~l~A~Da~tGe~LW  493 (560)
T d1kv9a2         418 AFNTAAGFADATDVPAAVVSGALLAWDPVKQKAAWKVPYP-THWNGGTLSTAGN-LVFQGT--AAGQMHAYSADKGEALW  493 (560)
T ss_dssp             SCCCSSCGGGCCCCCGGGCEEEEEEEETTTTEEEEEEEES-SSCCCCEEEETTT-EEEEEC--TTSEEEEEETTTCCEEE
T ss_pred             ccccccCcccccCCCCcccccceEEEeCCCCeEeeeccCC-CCCCCceeEECCC-EEEEEC--CCCcEEEEECCCCcEeE
Confidence                                46778899999888776422 1111111222233 666665  89999999999999999


Q ss_pred             EeeCCCCEEE--EEECCCCC-eEEEEEec------------------CCCcEEEEECCCCcc
Q 014934          373 CMDTGSQVCN--LVWSKNVN-ELVSTHGY------------------SQNQIIVWRYPTMSK  413 (415)
Q Consensus       373 ~~~~~~~V~~--l~~s~~~~-~l~s~~g~------------------~dg~I~vw~~~s~~~  413 (415)
                      +++....+..  +.|..+|+ +|++..|+                  ..+.|.+|.++...+
T Consensus       494 ~~~l~~~~~~~P~ty~~dGkqyv~v~aG~g~~~~~~~~~~~~~~~~~~g~~l~~F~L~g~~~  555 (560)
T d1kv9a2         494 QFEAQSGIVAAPMTFELAGRQYVAIMAGWGGVATLTGGESMNLPGMKNRSRLLVFALDGKAQ  555 (560)
T ss_dssp             EEECSSCCCSCCEEEEETTEEEEEEEECCCSHHHHHCCGGGGSTTCCCCCEEEEEEETCCCC
T ss_pred             EEECCCCccccCEEEEECCEEEEEEEeCCCcccccccccccccccCCCCCEEEEEEeCCCCC
Confidence            9986544332  56666786 44544442                  124688888876544


No 82 
>d1w6sa_ b.70.1.1 (A:) Methanol dehydrogenase, heavy chain {Methylobacterium extorquens [TaxId: 408]}
Probab=97.06  E-value=0.035  Score=54.14  Aligned_cols=81  Identities=14%  Similarity=0.091  Sum_probs=50.0

Q ss_pred             CcEEEEECCCCceeEEeccCCCcEEEEEEcCCCCcEEEEEcCCCCCeEEEEECCCCcEEEEeeCCCCEEE--EEECCCCC
Q 014934          313 NRLFVWNQHSTQPVLKYCEHTAAVKAIAWSPHLHGLLASGGGTADRCIRFWNTTTNTHLSCMDTGSQVCN--LVWSKNVN  390 (415)
Q Consensus       313 g~I~iwd~~~~~~~~~~~~h~~~V~~l~~sp~~~~llasggg~~d~~I~iwd~~t~~~~~~~~~~~~V~~--l~~s~~~~  390 (415)
                      |.|.-||+.+++.+.+... ...+.+-.++-.+. |+..|.  .|+.++-+|..+|+.+.+++....+..  +.|..+|+
T Consensus       453 G~l~A~D~~TG~~~W~~~~-~~~~~gg~lsTagg-lVF~G~--~Dg~l~A~Da~TGe~LW~~~~~~~~~a~P~tY~~dGk  528 (596)
T d1w6sa_         453 GQIKAYNAITGDYKWEKME-RFAVWGGTMATAGD-LVFYGT--LDGYLKARDSDTGDLLWKFKIPSGAIGYPMTYTHKGT  528 (596)
T ss_dssp             EEEEEECTTTCCEEEEEEE-SSCCCSBCEEETTT-EEEEEC--TTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTE
T ss_pred             ceEEEEeCCCCceecccCC-CCCCccceeEecCC-EEEEEC--CCCeEEEEECCCCcEeeEEECCCCcccCCeEEEECCE
Confidence            4577788888877766532 22221111222333 655565  899999999999999999986543322  55556776


Q ss_pred             e-EEEEEe
Q 014934          391 E-LVSTHG  397 (415)
Q Consensus       391 ~-l~s~~g  397 (415)
                      . ++...|
T Consensus       529 QYvav~~G  536 (596)
T d1w6sa_         529 QYVAIYYG  536 (596)
T ss_dssp             EEEEEEEC
T ss_pred             EEEEEEec
Confidence            4 444434


No 83 
>d1npea_ b.68.5.1 (A:) Nidogen {Mouse (Mus musculus) [TaxId: 10090]}
Probab=96.99  E-value=0.089  Score=45.35  Aligned_cols=199  Identities=7%  Similarity=-0.048  Sum_probs=127.3

Q ss_pred             eeEeecCC-CcEEEEE--cCCeEEEEECCCCCeEEeEecCCCCCeEEEEEcCCCCeEEEE-ECCCcEEEEECCCCeeeEE
Q 014934          170 LNLVDWSS-HNVLAVG--LGNCVYLWNACSSKVTKLCDLGIDDSVCSVGWANRNTHLAVG-TSHGKVQIWDASRCKRVRT  245 (415)
Q Consensus       170 i~~l~ws~-~~~la~~--~d~~V~iwd~~~~~~~~~~~~~~~~~V~~v~~sp~g~~la~g-~~dg~V~iwd~~~~~~~~~  245 (415)
                      +..|++.. ++.|..+  .++.|+..++..+....+.. ..-..+.++++..-+..|..+ ...+.|.+.++........
T Consensus        38 ~~~ld~D~~~~~iywsd~~~~~I~~~~l~g~~~~~v~~-~~~~~p~~iAvD~~~~~lY~~d~~~~~I~~~~~dg~~~~~l  116 (263)
T d1npea_          38 IIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIR-QDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVL  116 (263)
T ss_dssp             EEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEEC-TTCCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEE
T ss_pred             EEEEEEEeCCCEEEEEECCCCeEEEEEcccCCcEEEEE-eccccccEEEEeccCCeEEEeccCCCEEEEEecCCceEEEE
Confidence            45567765 4545444  35789988887776655554 233578999998766655544 4567899999875543333


Q ss_pred             ecCCCccEEEEEeeC--CEEEEEe-C--CCcEEEEECCCCCccEEEeccccCCeEEEEEeCCCCEEEEE-eCCCcEEEEE
Q 014934          246 MEGHRLRVGALAWSS--SLLSSGS-R--DKSILQRDIRAQEDFVSKLSGHKSEVCGLKWSYDNRELASG-GNDNRLFVWN  319 (415)
Q Consensus       246 l~~h~~~V~~l~~~~--~~l~sgs-~--dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~spdg~~lasg-~~dg~I~iwd  319 (415)
                      +.........++.++  .+++-.. .  ...|..-++..... .......-....+|++.+.++.|..+ ...+.|...|
T Consensus       117 ~~~~l~~p~~l~vdp~~g~ly~t~~~~~~~~I~r~~~dG~~~-~~i~~~~~~~P~glaiD~~~~~lYw~d~~~~~I~~~~  195 (263)
T d1npea_         117 FDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNR-RILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLN  195 (263)
T ss_dssp             ECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCCC-EEEECTTCSCEEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred             ecccccCCcEEEEecccCcEEEeecCCCCcEEEEecCCCCCc-eeeeeecccccceEEEeecCcEEEEEeCCCCEEEEEE
Confidence            343446688888873  4444332 2  22355556655442 23333334567899999887777555 4678899999


Q ss_pred             CCCCceeEEeccCCCcEEEEEEcCCCCcEEEEEcCCCCCeEEEEECCCCcEEEEee
Q 014934          320 QHSTQPVLKYCEHTAAVKAIAWSPHLHGLLASGGGTADRCIRFWNTTTNTHLSCMD  375 (415)
Q Consensus       320 ~~~~~~~~~~~~h~~~V~~l~~sp~~~~llasggg~~d~~I~iwd~~t~~~~~~~~  375 (415)
                      +........+.+.. ...+|++.  +.+++.+-.  ..+.|...|..+++.+..+.
T Consensus       196 ~~g~~~~~v~~~~~-~P~~lav~--~~~lYwtd~--~~~~I~~~~~~~g~~~~~~~  246 (263)
T d1npea_         196 PAQPGRRKVLEGLQ-YPFAVTSY--GKNLYYTDW--KTNSVIAMDLAISKEMDTFH  246 (263)
T ss_dssp             TTEEEEEEEEECCC-SEEEEEEE--TTEEEEEET--TTTEEEEEETTTTEEEEEEC
T ss_pred             CCCCCeEEEECCCC-CcEEEEEE--CCEEEEEEC--CCCEEEEEECCCCccceEEC
Confidence            87654433343333 34677776  446888765  57889999999998877664


No 84 
>d1kb0a2 b.70.1.1 (A:1-573) Quinoprotein alcohol dehydrogenase, N-terminal domain {Comamonas testosteroni [TaxId: 285]}
Probab=96.91  E-value=0.11  Score=50.13  Aligned_cols=96  Identities=13%  Similarity=0.180  Sum_probs=58.7

Q ss_pred             cEEEEECCCCceeEEeccCCCcEEEEEEcCCCCcEEEEEcCCCCCeEEEEECCCCcEEEEeeCCCCEEE--EEECCCCC-
Q 014934          314 RLFVWNQHSTQPVLKYCEHTAAVKAIAWSPHLHGLLASGGGTADRCIRFWNTTTNTHLSCMDTGSQVCN--LVWSKNVN-  390 (415)
Q Consensus       314 ~I~iwd~~~~~~~~~~~~h~~~V~~l~~sp~~~~llasggg~~d~~I~iwd~~t~~~~~~~~~~~~V~~--l~~s~~~~-  390 (415)
                      .|.-||+.+++.+.++.... +...=..+-.+. |+..|.  .|+.++.+|..+|+.+.+++....+..  +.|..+|+ 
T Consensus       458 ~l~AiD~~tGk~~W~~~~~~-p~~gg~lstagg-lVF~G~--~dg~l~A~Da~TGe~LW~~~~~~~~~~~P~ty~~~GkQ  533 (573)
T d1kb0a2         458 RLLAWDPVAQKAAWSVEHVS-PWNGGTLTTAGN-VVFQGT--ADGRLVAYHAATGEKLWEAPTGTGVVAAPSTYMVDGRQ  533 (573)
T ss_dssp             EEEEEETTTTEEEEEEEESS-SCCCCEEEETTT-EEEEEC--TTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEE
T ss_pred             cEEEeCCCCCceEeeecCCC-CCCCceEEEcCC-EEEEEC--CCCeEEEEECCCCcEeEEEECCCCccccCEEEEECCEE
Confidence            46667777777776664322 111111122333 555555  899999999999999999986544333  55666776 


Q ss_pred             eEEEEEec--------------CCCcEEEEECCCCcc
Q 014934          391 ELVSTHGY--------------SQNQIIVWRYPTMSK  413 (415)
Q Consensus       391 ~l~s~~g~--------------~dg~I~vw~~~s~~~  413 (415)
                      +++..+|.              ..+.|.+|.+....+
T Consensus       534 Yv~v~~G~gg~~~~~~~~~~~~~~~~~~~F~l~g~~~  570 (573)
T d1kb0a2         534 YVSVAVGWGGVYGLAARATERQGPGTVYTFVVGGKAR  570 (573)
T ss_dssp             EEEEEECCCHHHHHHCCSCSCCCCCEEEEEEETCBCC
T ss_pred             EEEEEeCCCcccccccccccCCCCCEEEEEEeCCcCC
Confidence            44554442              124688888765443


No 85 
>d1kv9a2 b.70.1.1 (A:1-560) Quinoprotein alcohol dehydrogenase, N-terminal domain {Pseudomonas putida, hk5 [TaxId: 303]}
Probab=96.88  E-value=0.049  Score=52.68  Aligned_cols=234  Identities=12%  Similarity=0.082  Sum_probs=133.5

Q ss_pred             CcEEEEEcCCeEEEEECCCCCeEEeEecCCCCCeEEEEEcC--CCCeEEEEEC------CCcEEEEECCCCeeeEEecCC
Q 014934          178 HNVLAVGLGNCVYLWNACSSKVTKLCDLGIDDSVCSVGWAN--RNTHLAVGTS------HGKVQIWDASRCKRVRTMEGH  249 (415)
Q Consensus       178 ~~~la~~~d~~V~iwd~~~~~~~~~~~~~~~~~V~~v~~sp--~g~~la~g~~------dg~V~iwd~~~~~~~~~l~~h  249 (415)
                      +.+++...++.|+-.|..+|+...............+.-.|  .+..++++..      .|.|.-+|.++++.+-.+..-
T Consensus       118 ~~v~~~~~~g~l~Alda~tG~~~w~~~~~~~~~~~~~~~~p~v~~~~vivg~~~~~~~~~G~v~a~D~~TG~~~W~~~t~  197 (560)
T d1kv9a2         118 DKVYVGTLDGRLIALDAKTGKAIWSQQTTDPAKPYSITGAPRVVKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRFYTV  197 (560)
T ss_dssp             TEEEEECTTSEEEEEETTTCCEEEEEECSCTTSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESS
T ss_pred             CeEEEEeCCCEEEEEECCCCcEEeccCccCcccceeeeeeeeeecCcccccccceeccccceEEEEECCCceEEeeeeec
Confidence            45666667899999999999987766532211111111111  1234444432      367999999999887665310


Q ss_pred             ---Cc-----------------------cEEEEEee-------CCEEEEEeC-------------------CCcEEEEEC
Q 014934          250 ---RL-----------------------RVGALAWS-------SSLLSSGSR-------------------DKSILQRDI  277 (415)
Q Consensus       250 ---~~-----------------------~V~~l~~~-------~~~l~sgs~-------------------dg~I~iwd~  277 (415)
                         ..                       ....-.|.       .++++.+..                   ...|.-.|+
T Consensus       198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~W~~~s~D~~~~l~y~~tgn~~~~~~~~~~~~~g~n~~s~sivAld~  277 (560)
T d1kv9a2         198 PGDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRP  277 (560)
T ss_dssp             CCCTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECT
T ss_pred             cccccCCccccccccccccccccccccccCCCCcccccccccccCeeeecCCCCcccccccccccCCccccceeeEEecC
Confidence               00                       01222232       234433321                   234667788


Q ss_pred             CCCCccEEEeccccCCe---------EEEEEeCCCC---EEEEEeCCCcEEEEECCCCceeEEeccCC-C----------
Q 014934          278 RAQEDFVSKLSGHKSEV---------CGLKWSYDNR---ELASGGNDNRLFVWNQHSTQPVLKYCEHT-A----------  334 (415)
Q Consensus       278 ~~~~~~~~~~~~h~~~V---------~~l~~spdg~---~lasg~~dg~I~iwd~~~~~~~~~~~~h~-~----------  334 (415)
                      ++++. .-.++.....+         .-+....+++   .++.++.+|.++++|..+++++.....-. .          
T Consensus       278 ~tG~~-~W~~Q~~~~D~wd~d~~~~~~l~~~~~~g~~~~~v~~~~k~G~~~~lDr~tG~~i~~~~~~~~~~~~~~d~~~~  356 (560)
T d1kv9a2         278 DTGKL-AWHYQVTPGDSWDFTATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKLISAEKFGKVTWAEKVDLATG  356 (560)
T ss_dssp             TTCCE-EEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCCSEEEECTTTC
T ss_pred             Cccce-eEEEeccccccccccccceeeeeeeecCCceeeeeeecCccceEEEEecCCCcccccccccccccccccChhhc
Confidence            87763 22222211111         1122223443   56778899999999999998875542100 0          


Q ss_pred             -------------cE------------EEEEEcCCCCcEEEEEc---------------------------------CCC
Q 014934          335 -------------AV------------KAIAWSPHLHGLLASGG---------------------------------GTA  356 (415)
Q Consensus       335 -------------~V------------~~l~~sp~~~~llasgg---------------------------------g~~  356 (415)
                                   .+            ...+++|+...+++...                                 +..
T Consensus       357 ~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~dp~~~~~yvp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~  436 (560)
T d1kv9a2         357 RPVEAPGVRYEKEPIVMWPSPFGAHNWHSMSFNPGTGLVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATDVPAAVV  436 (560)
T ss_dssp             CEEECTTTTCSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCCCCGGGC
T ss_pred             cccccccccccccceeeeeccccccccccccccCCCCeeecccccccceeeccccccccccccccccCcccccCCCCccc
Confidence                         00            13456666554443321                                 001


Q ss_pred             CCeEEEEECCCCcEEEEeeCCCCEEEEEECCCCCeEEEEEecCCCcEEEEECCCCccc
Q 014934          357 DRCIRFWNTTTNTHLSCMDTGSQVCNLVWSKNVNELVSTHGYSQNQIIVWRYPTMSKV  414 (415)
Q Consensus       357 d~~I~iwd~~t~~~~~~~~~~~~V~~l~~s~~~~~l~s~~g~~dg~I~vw~~~s~~~l  414 (415)
                      .+.|.-||+.+|+.+..+..+....+-..+-.+..+++  |..||.|+.+|..+++.|
T Consensus       437 ~G~l~A~D~~tGk~~W~~~~~~~~~gg~l~TagglVF~--G~~dg~l~A~Da~tGe~L  492 (560)
T d1kv9a2         437 SGALLAWDPVKQKAAWKVPYPTHWNGGTLSTAGNLVFQ--GTAAGQMHAYSADKGEAL  492 (560)
T ss_dssp             EEEEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEEE--ECTTSEEEEEETTTCCEE
T ss_pred             ccceEEEeCCCCeEeeeccCCCCCCCceeEECCCEEEE--ECCCCcEEEEECCCCcEe
Confidence            35788999999999988875554443333445666666  788999999999999875


No 86 
>d1flga_ b.70.1.1 (A:) Ethanol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}
Probab=96.87  E-value=0.018  Score=56.12  Aligned_cols=95  Identities=21%  Similarity=0.296  Sum_probs=64.0

Q ss_pred             CCcEEEEECCCCceeEEeccCCCcEEEEEEcCCCCcEEEEEcCCCCCeEEEEECCCCcEEEEeeCCCCEE--EEEECCCC
Q 014934          312 DNRLFVWNQHSTQPVLKYCEHTAAVKAIAWSPHLHGLLASGGGTADRCIRFWNTTTNTHLSCMDTGSQVC--NLVWSKNV  389 (415)
Q Consensus       312 dg~I~iwd~~~~~~~~~~~~h~~~V~~l~~sp~~~~llasggg~~d~~I~iwd~~t~~~~~~~~~~~~V~--~l~~s~~~  389 (415)
                      .|.|.-+|+.+++.+.++..+. ++..-..+..+. ++..|.  .|+.++-+|..||+.+.+++....+.  -+.|..+|
T Consensus       465 ~G~l~AiD~~TG~i~W~~~~~~-p~~~g~lstagg-lVF~Gt--~dg~l~A~Da~TGe~LW~~~~~~~~~~~P~ty~~~G  540 (582)
T d1flga_         465 VGSLRAMDPVSGKVVWEHKEHL-PLWAGVLATAGN-LVFTGT--GDGYFKAFDAKSGKELWKFQTGSGIVSPPITWEQDG  540 (582)
T ss_dssp             SEEEEEECTTTCCEEEEEEESS-CCCSCCEEETTT-EEEEEC--TTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETT
T ss_pred             CCeEEEEcCCCCcEEeecCCCC-CCccceeEEcCC-eEEEeC--CCCeEEEEECCCCcEeEEEECCCCccccCEEEEECC
Confidence            3678889999999888775433 222111223343 555555  89999999999999999998654432  26777788


Q ss_pred             C-eEEEEEec-------------------CCCcEEEEECCC
Q 014934          390 N-ELVSTHGY-------------------SQNQIIVWRYPT  410 (415)
Q Consensus       390 ~-~l~s~~g~-------------------~dg~I~vw~~~s  410 (415)
                      + +++...|+                   ..+.|.+|.+|+
T Consensus       541 ~qYv~i~ag~g~~~~~~~g~~~~~~~~~~~g~~l~vF~Lp~  581 (582)
T d1flga_         541 EQYLGVTVGYGGAVPLWGGDMADLTRPVAQGGSFWVFKLPS  581 (582)
T ss_dssp             EEEEEEEECCCSHHHHHCTHHHHHHTTCCCCCEEEEEECCC
T ss_pred             EEEEEEEeCCCCccccccccccccccccCCCCEEEEEeCCC
Confidence            5 45554442                   235788998886


No 87 
>d1w6sa_ b.70.1.1 (A:) Methanol dehydrogenase, heavy chain {Methylobacterium extorquens [TaxId: 408]}
Probab=96.79  E-value=0.18  Score=48.92  Aligned_cols=233  Identities=14%  Similarity=0.074  Sum_probs=132.0

Q ss_pred             EEEEEcCCeEEEEECCCCCeEEeEecCCCCCeEEEEEcC--CCCeEEEEEC------CCcEEEEECCCCeeeEEecCCC-
Q 014934          180 VLAVGLGNCVYLWNACSSKVTKLCDLGIDDSVCSVGWAN--RNTHLAVGTS------HGKVQIWDASRCKRVRTMEGHR-  250 (415)
Q Consensus       180 ~la~~~d~~V~iwd~~~~~~~~~~~~~~~~~V~~v~~sp--~g~~la~g~~------dg~V~iwd~~~~~~~~~l~~h~-  250 (415)
                      ++....|+.|+-.|..+|+....+.......-..+.-.|  -+..+++|..      .|.|+-+|+.+++.+=.+.... 
T Consensus       124 v~~~t~dg~l~Alda~tG~~~w~~~~~d~~~~~~~t~~P~v~~~~vivg~~~~e~~~~G~v~A~Da~TG~~~W~~~t~~~  203 (596)
T d1w6sa_         124 ILKTQLDGNVAALNAETGETVWKVENSDIKVGSTLTIAPYVVKDKVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYATGP  203 (596)
T ss_dssp             EEEECTTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEETTEEEECCBCGGGTCCCEEEEEETTTCCEEEEEESSSC
T ss_pred             EEEEeCCCCeEeeccccCceeccccccccccccccccCCcEECCeEEEeeccccccccCceEEEECCCCcEEEEeeccCC
Confidence            555557899999999999987776532111101111112  2445666653      4889999999999876543110 


Q ss_pred             ------------------------------------ccE-EEEEee--CCEEEEEeCC----------------CcEEEE
Q 014934          251 ------------------------------------LRV-GALAWS--SSLLSSGSRD----------------KSILQR  275 (415)
Q Consensus       251 ------------------------------------~~V-~~l~~~--~~~l~sgs~d----------------g~I~iw  275 (415)
                                                          ..+ ..++.+  .+++..+..+                ..|.-.
T Consensus       204 ~~~~~~~~~~~~~~~~~g~~~~~~~tw~g~~~~~gg~~~W~~~s~D~~~~lvy~~tg~~~p~~~~~r~g~n~ys~sivAl  283 (596)
T d1w6sa_         204 DKDLLLASDFNIKNPHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIFGR  283 (596)
T ss_dssp             HHHHTBCTTTTTTCGGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEEEE
T ss_pred             ccccccccccccccccccccccccccCCCCceecCCCccccccccccCCCeeeccccccccccccccccccccccccccc
Confidence                                                000 111222  2444444322                347778


Q ss_pred             ECCCCCccEEEecc-cc-------CCeEEEEE-eCCCC---EEEEEeCCCcEEEEECCCCceeEEeccC--CCc------
Q 014934          276 DIRAQEDFVSKLSG-HK-------SEVCGLKW-SYDNR---ELASGGNDNRLFVWNQHSTQPVLKYCEH--TAA------  335 (415)
Q Consensus       276 d~~~~~~~~~~~~~-h~-------~~V~~l~~-spdg~---~lasg~~dg~I~iwd~~~~~~~~~~~~h--~~~------  335 (415)
                      |+++++..-+.-.. |.       ....-+.. ..+|+   .++.+..+|.++++|..+++++...+..  ...      
T Consensus       284 D~~TG~~~W~~Q~~~~D~Wd~d~~~~~~l~d~~~~~G~~~~~v~~~~k~G~~~vlDr~tG~~i~~~~~~~~~~~~~~~d~  363 (596)
T d1w6sa_         284 DADTGEAKFGYQKTPHDEWDYAGVNVMMLSEQKDKDGKARKLLTHPDRNGIVYTLDRTDGALVSANKLDDTVNVFKSVDL  363 (596)
T ss_dssp             ETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEECTTSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEECT
T ss_pred             ccccccccccccceeccccCCccccceeeeeccccccccccceeccccccceeeecCCCCceeeeccccccccccccccc
Confidence            88888743222222 21       11111221 23443   5778899999999999999877543210  000      


Q ss_pred             -----E--------------------------EEEEEcCCCCcEEEEEc-------------------------------
Q 014934          336 -----V--------------------------KAIAWSPHLHGLLASGG-------------------------------  353 (415)
Q Consensus       336 -----V--------------------------~~l~~sp~~~~llasgg-------------------------------  353 (415)
                           +                          ...+++|....+++-..                               
T Consensus       364 ~~~~p~~~~~~~~~~~~~~~~i~pg~~Gg~nw~~~a~dp~~~l~yvp~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~  443 (596)
T d1w6sa_         364 KTGQPVRDPEYGTRMDHLAKDICPSAMGYHNQGHDSYDPKRELFFMGINHICMDWEPFMLPYKAGQFFVGATLNMYPGPK  443 (596)
T ss_dssp             TTCCEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTT
T ss_pred             cccccccCccccccCCccceeEecccccccccCccccCCCCceEEecccccccccccccccccccccccccccccccCcc
Confidence                 0                          11245555442322210                               


Q ss_pred             C-----CCCCeEEEEECCCCcEEEEeeCCCCEEEEEECCCCCeEEEEEecCCCcEEEEECCCCccc
Q 014934          354 G-----TADRCIRFWNTTTNTHLSCMDTGSQVCNLVWSKNVNELVSTHGYSQNQIIVWRYPTMSKV  414 (415)
Q Consensus       354 g-----~~d~~I~iwd~~t~~~~~~~~~~~~V~~l~~s~~~~~l~s~~g~~dg~I~vw~~~s~~~l  414 (415)
                      |     ..-|.|.-||+.+|+.+........+.+-..+..+..++.  |..||.++.+|..+++.|
T Consensus       444 g~~~~~~~~G~l~A~D~~TG~~~W~~~~~~~~~gg~lsTagglVF~--G~~Dg~l~A~Da~TGe~L  507 (596)
T d1w6sa_         444 GDRQNYEGLGQIKAYNAITGDYKWEKMERFAVWGGTMATAGDLVFY--GTLDGYLKARDSDTGDLL  507 (596)
T ss_dssp             SBTTTTBCCEEEEEECTTTCCEEEEEEESSCCCSBCEEETTTEEEE--ECTTSEEEEEETTTCCEE
T ss_pred             cCcccCCCcceEEEEeCCCCceecccCCCCCCccceeEecCCEEEE--ECCCCeEEEEECCCCcEe
Confidence            0     0125788999999998877765544333333345666666  889999999999999875


No 88 
>d1xipa_ b.69.14.1 (A:) Nucleoporin NUP159 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=96.73  E-value=0.07  Score=48.67  Aligned_cols=169  Identities=9%  Similarity=0.001  Sum_probs=103.4

Q ss_pred             eeEeecCC-CcEEEEEcCCeEEEEECC-----------CCCeEEeEecCCCCCeEEEEEcCCCCeEEEEECCCcEEEEEC
Q 014934          170 LNLVDWSS-HNVLAVGLGNCVYLWNAC-----------SSKVTKLCDLGIDDSVCSVGWANRNTHLAVGTSHGKVQIWDA  237 (415)
Q Consensus       170 i~~l~ws~-~~~la~~~d~~V~iwd~~-----------~~~~~~~~~~~~~~~V~~v~~sp~g~~la~g~~dg~V~iwd~  237 (415)
                      +++++.++ ..++++|....+.|-...           .........+   ..|..++|+.+  .|++. .++.+..++.
T Consensus        39 ~~LLAVsn~~GLl~aa~~~~l~V~~t~~l~~~~~~~~~~~~~~~~~~i---p~v~~vafs~d--~l~v~-~~~~l~~~~~  112 (381)
T d1xipa_          39 LQNLDISNSKSLFVAASGSKAVVGELQLLRDHITSDSTPLTFKWEKEI---PDVIFVCFHGD--QVLVS-TRNALYSLDL  112 (381)
T ss_dssp             CBCEEEETTTTEEEEEETTEEEEEEHHHHHHHHHSSSCCCCCSEEEEC---TTEEEEEEETT--EEEEE-ESSEEEEEES
T ss_pred             cceEEEeCCCCEEEEECCCEEEEEEHHHHHHHhhccCCCCcceeccCC---CCeEEEEeeCC--EEEEE-eCCCEEEEEe
Confidence            66889998 677877777788887632           1122222221   36889999744  56664 4556888887


Q ss_pred             CCCeeeEEecCCCccEEEEEeeCCEEEEEeCCCcEEEEECCCCCccEEEe-----ccccCCeEEEEEeCCCCEEEEEeCC
Q 014934          238 SRCKRVRTMEGHRLRVGALAWSSSLLSSGSRDKSILQRDIRAQEDFVSKL-----SGHKSEVCGLKWSYDNRELASGGND  312 (415)
Q Consensus       238 ~~~~~~~~l~~h~~~V~~l~~~~~~l~sgs~dg~I~iwd~~~~~~~~~~~-----~~h~~~V~~l~~spdg~~lasg~~d  312 (415)
                      ..-........-..++..+.+++..++....+|.+.++++..... ....     ..-.+.+.+++|++.|.+++++..+
T Consensus       113 ~~l~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~~l~~~~~-~~~~~~v~~~~~~~~~~~v~ws~kgkq~v~~~g~  191 (381)
T d1xipa_         113 EELSEFRTVTSFEKPVFQLKNVNNTLVILNSVNDLSALDLRTKST-KQLAQNVTSFDVTNSQLAVLLKDRSFQSFAWRNG  191 (381)
T ss_dssp             SSTTCEEEEEECSSCEEEEEECSSEEEEEETTSEEEEEETTTCCE-EEEEESEEEEEECSSEEEEEETTSCEEEEEEETT
T ss_pred             eccccccccccccccccceecCCceeEEEecCCCEEEEEeccCcc-ccccCCcceEEecCCceEEEEeCCcEEEEEeCCC
Confidence            664444444444567899999999999999999999999987752 1111     1123557778888777777776433


Q ss_pred             CcEEE-EECCCCceeEEeccCCCcEEEEEEcCCCC
Q 014934          313 NRLFV-WNQHSTQPVLKYCEHTAAVKAIAWSPHLH  346 (415)
Q Consensus       313 g~I~i-wd~~~~~~~~~~~~h~~~V~~l~~sp~~~  346 (415)
                      + ..+ -++.....+.........|.+|.|-....
T Consensus       192 ~-~q~k~~i~~~~~~~~p~~~~~~v~sI~WL~~~~  225 (381)
T d1xipa_         192 E-MEKQFEFSLPSELEELPVEEYSPLSVTILSPQD  225 (381)
T ss_dssp             E-EEEEEEECCCHHHHTSCTTTSEEEEEEESSSSE
T ss_pred             c-eeeccCCCCccccCCCcCCCcceeEEEEecCce
Confidence            2 111 11111111100012345688999986644


No 89 
>d1kb0a2 b.70.1.1 (A:1-573) Quinoprotein alcohol dehydrogenase, N-terminal domain {Comamonas testosteroni [TaxId: 285]}
Probab=96.62  E-value=0.24  Score=47.72  Aligned_cols=55  Identities=11%  Similarity=0.154  Sum_probs=41.0

Q ss_pred             CeEEEEECCCCcEEEEeeCCCCEEEEEECCCCCeEEEEEecCCCcEEEEECCCCccc
Q 014934          358 RCIRFWNTTTNTHLSCMDTGSQVCNLVWSKNVNELVSTHGYSQNQIIVWRYPTMSKV  414 (415)
Q Consensus       358 ~~I~iwd~~t~~~~~~~~~~~~V~~l~~s~~~~~l~s~~g~~dg~I~vw~~~s~~~l  414 (415)
                      |.|.-||+.+|+.+..+....+...-..+-.+..+++  |..||.++.+|..++++|
T Consensus       457 G~l~AiD~~tGk~~W~~~~~~p~~gg~lstagglVF~--G~~dg~l~A~Da~TGe~L  511 (573)
T d1kb0a2         457 GRLLAWDPVAQKAAWSVEHVSPWNGGTLTTAGNVVFQ--GTADGRLVAYHAATGEKL  511 (573)
T ss_dssp             EEEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEEE--ECTTSEEEEEETTTCCEE
T ss_pred             ccEEEeCCCCCceEeeecCCCCCCCceEEEcCCEEEE--ECCCCeEEEEECCCCcEe
Confidence            4688899999999888875544333223345667776  788999999999999875


No 90 
>d1k3ia3 b.69.1.1 (A:151-537) Galactose oxidase, central domain {Fungi (Fusarium sp.) [TaxId: 29916]}
Probab=96.54  E-value=0.14  Score=45.95  Aligned_cols=136  Identities=11%  Similarity=0.066  Sum_probs=83.3

Q ss_pred             eEEEEECCCCCeEEeE--ecCCCCCeEEEEEcCCCCeEEEEECC-CcEEEEECCCCeeeEE--ecCCCccEEEEEe-eCC
Q 014934          188 CVYLWNACSSKVTKLC--DLGIDDSVCSVGWANRNTHLAVGTSH-GKVQIWDASRCKRVRT--MEGHRLRVGALAW-SSS  261 (415)
Q Consensus       188 ~V~iwd~~~~~~~~~~--~~~~~~~V~~v~~sp~g~~la~g~~d-g~V~iwd~~~~~~~~~--l~~h~~~V~~l~~-~~~  261 (415)
                      .+.+||..++......  ...+.....+.++.++|++++.|+.+ ..+.+||..+..-...  +........++.. ++.
T Consensus        53 ~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~i~v~Gg~~~~~~~~yd~~~~~w~~~~~~~~~r~~~~~~~~~dG~  132 (387)
T d1k3ia3          53 LTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTSLYDSSSDSWIPGPDMQVARGYQSSATMSDGR  132 (387)
T ss_dssp             EEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEEEEEGGGTEEEECCCCSSCCSSCEEEECTTSC
T ss_pred             EEEEEECCCCcEeecCCCCCCcccceeEEEEecCCcEEEeecCCCcceeEecCccCcccccccccccccccceeeecCCc
Confidence            3789999998765432  22344445567889999999988655 5799999987654322  2222222233333 467


Q ss_pred             EEEEEeCC------CcEEEEECCCCCccEEEecc----------cc-----CCeEEEEEeCCCCEEEEEeCCCcEEEEEC
Q 014934          262 LLSSGSRD------KSILQRDIRAQEDFVSKLSG----------HK-----SEVCGLKWSYDNRELASGGNDNRLFVWNQ  320 (415)
Q Consensus       262 ~l~sgs~d------g~I~iwd~~~~~~~~~~~~~----------h~-----~~V~~l~~spdg~~lasg~~dg~I~iwd~  320 (415)
                      +++.|+.+      ..+.+||..+..  ...+..          +.     ..-..+..-++|+.++.++.++.+.++|.
T Consensus       133 v~v~GG~~~~~~~~~~v~~yd~~~~~--W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~g~~~~~~~~~~~  210 (387)
T d1k3ia3         133 VFTIGGSWSGGVFEKNGEVYSPSSKT--WTSLPNAKVNPMLTADKQGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTS  210 (387)
T ss_dssp             EEEECCCCCSSSCCCCEEEEETTTTE--EEEETTSCSGGGCCCCTTGGGTTTCSCCEEECGGGCEEECCSSSEEEEEECS
T ss_pred             eeeeccccccccccceeeeecCCCCc--eeecCCCcccccccccccceeeccceeEEEEeCCCCEEEecCcCCcEEecCc
Confidence            88887753      358999988764  111110          00     00111223457888888888888888888


Q ss_pred             CCCce
Q 014934          321 HSTQP  325 (415)
Q Consensus       321 ~~~~~  325 (415)
                      .+...
T Consensus       211 ~~~~~  215 (387)
T d1k3ia3         211 GSGDV  215 (387)
T ss_dssp             TTCEE
T ss_pred             ccCcE
Confidence            77643


No 91 
>d1k3ia3 b.69.1.1 (A:151-537) Galactose oxidase, central domain {Fungi (Fusarium sp.) [TaxId: 29916]}
Probab=96.50  E-value=0.26  Score=43.99  Aligned_cols=233  Identities=8%  Similarity=0.017  Sum_probs=121.8

Q ss_pred             ecCC-CcEEEEEc--CCeEEEEECCCCCeEEeEecCCCCCeEEEEEcCCCCeEEEEECC------CcEEEEECCCCeeeE
Q 014934          174 DWSS-HNVLAVGL--GNCVYLWNACSSKVTKLCDLGIDDSVCSVGWANRNTHLAVGTSH------GKVQIWDASRCKRVR  244 (415)
Q Consensus       174 ~ws~-~~~la~~~--d~~V~iwd~~~~~~~~~~~~~~~~~V~~v~~sp~g~~la~g~~d------g~V~iwd~~~~~~~~  244 (415)
                      .+.+ +.++++|.  ...+.+||..+......-.......-.+++..+||+++++|+.+      ..+.+||..+.+-..
T Consensus        82 ~~~~~g~i~v~Gg~~~~~~~~yd~~~~~w~~~~~~~~~r~~~~~~~~~dG~v~v~GG~~~~~~~~~~v~~yd~~~~~W~~  161 (387)
T d1k3ia3          82 SMDGNGQIVVTGGNDAKKTSLYDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTS  161 (387)
T ss_dssp             EECTTSCEEEECSSSTTCEEEEEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEEE
T ss_pred             EEecCCcEEEeecCCCcceeEecCccCcccccccccccccccceeeecCCceeeeccccccccccceeeeecCCCCceee
Confidence            4445 67777774  35899999999887665544333444567778899999998753      368999998764322


Q ss_pred             Eec---------CCC------ccE-EEEEeeCCEEEEEeCCCcEEEEECCCCCccEEEec--c---ccCC--eEEEEEe-
Q 014934          245 TME---------GHR------LRV-GALAWSSSLLSSGSRDKSILQRDIRAQEDFVSKLS--G---HKSE--VCGLKWS-  300 (415)
Q Consensus       245 ~l~---------~h~------~~V-~~l~~~~~~l~sgs~dg~I~iwd~~~~~~~~~~~~--~---h~~~--V~~l~~s-  300 (415)
                      .-.         .+.      ... ...-.+++.+..++.++.+.++|............  .   +...  -.++.+. 
T Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (387)
T d1k3ia3         162 LPNAKVNPMLTADKQGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDA  241 (387)
T ss_dssp             ETTSCSGGGCCCCTTGGGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEET
T ss_pred             cCCCcccccccccccceeeccceeEEEEeCCCCEEEecCcCCcEEecCcccCcEeeccccccCcccCcccccccEEEeec
Confidence            111         000      011 11112356677777777777777766541111000  0   1111  1222222 


Q ss_pred             CCCCEEEEEeCCC--------cEEEEECCCCc---eeEEecc---CCCcEEEEEEcCCCCcEEEEEcCC-----CC----
Q 014934          301 YDNRELASGGNDN--------RLFVWNQHSTQ---PVLKYCE---HTAAVKAIAWSPHLHGLLASGGGT-----AD----  357 (415)
Q Consensus       301 pdg~~lasg~~dg--------~I~iwd~~~~~---~~~~~~~---h~~~V~~l~~sp~~~~llasggg~-----~d----  357 (415)
                      .+++.++.|+...        ...+.++....   .......   +...-.+.+..++++ +++.||..     .+    
T Consensus       242 ~~g~v~v~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~~dg~-i~v~GG~~~~~~~~~~~~~  320 (387)
T d1k3ia3         242 VKGKILTFGGSPDYQDSDATTNAHIITLGEPGTSPNTVFASNGLYFARTFHTSVVLPDGS-TFITGGQRRGIPFEDSTPV  320 (387)
T ss_dssp             TTTEEEEECCBSSSSSSBCCCCEEEEECCSTTSCCEEEECTTCCSSCCBSCEEEECTTSC-EEEECCBSBCCTTCCCSBC
T ss_pred             cCCceEEEEeccCCCCCcccceeecccccccccCCCceeeccccccccccceeeeccCCe-EEEECCcccCccCCCCcEe
Confidence            3667777776422        23444433221   1111111   111223455567876 88887621     11    


Q ss_pred             CeEEEEECCCCcEEEE--eeCCC-CEEEEEECCCCCeEEEEEecC--------CCcEEEEECC
Q 014934          358 RCIRFWNTTTNTHLSC--MDTGS-QVCNLVWSKNVNELVSTHGYS--------QNQIIVWRYP  409 (415)
Q Consensus       358 ~~I~iwd~~t~~~~~~--~~~~~-~V~~l~~s~~~~~l~s~~g~~--------dg~I~vw~~~  409 (415)
                      ..+.+||..+.+-...  ..... .-......+||+.|+.  |+.        +..|.+|+-+
T Consensus       321 ~~ve~Ydp~~~~W~~~~~~~~~R~~Hs~a~l~~dG~v~v~--GG~~~~~~~~~~~~~e~y~Pp  381 (387)
T d1k3ia3         321 FTPEIYVPEQDTFYKQNPNSIVRVYHSISLLLPDGRVFNG--GGGLCGDCTTNHFDAQIFTPN  381 (387)
T ss_dssp             CCCEEEEGGGTEEEECCCCSSCCCTTEEEEECTTSCEEEE--ECCCCTTCSCCCCEEEEEECG
T ss_pred             ceEEEEECCCCeEEECCCCCCcccceEEEEECCCCEEEEE--eCCCcCCCCcccceEEEEcch
Confidence            2478899887753221  11111 1123456799999988  442        2357777743


No 92 
>d1ijqa1 b.68.5.1 (A:377-642) Low density lipoprotein (LDL) receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.46  E-value=0.22  Score=42.73  Aligned_cols=186  Identities=12%  Similarity=-0.006  Sum_probs=119.1

Q ss_pred             eEEEEECCCcEEEEECCCCeeeEEecCCCccEEEEEee--CCEEE-EEeCCCcEEEEECCCCC---ccEEEeccccCCeE
Q 014934          222 HLAVGTSHGKVQIWDASRCKRVRTMEGHRLRVGALAWS--SSLLS-SGSRDKSILQRDIRAQE---DFVSKLSGHKSEVC  295 (415)
Q Consensus       222 ~la~g~~dg~V~iwd~~~~~~~~~l~~h~~~V~~l~~~--~~~l~-sgs~dg~I~iwd~~~~~---~~~~~~~~h~~~V~  295 (415)
                      +|+.+.. ..|+-.++.+......+. ....+.+|+|+  .+.|+ +-...+.|...++....   .....+......+.
T Consensus         3 fLl~s~~-~~I~~~~l~~~~~~~~~~-~~~~~~~id~d~~~~~lYw~D~~~~~I~~~~l~~~~~~~~~~~~~~~~~~~p~   80 (266)
T d1ijqa1           3 YLFFTNR-HEVRKMTLDRSEYTSLIP-NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPD   80 (266)
T ss_dssp             EEEEECB-SSEEEEETTSCCCEEEEC-SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCC
T ss_pred             EEEEECC-CeEEEEECCCCcceeeeC-CCCceEEEEEEeCCCEEEEEECCCCEEEEEEecCCCCCcceEEEEeCCCCCcc
Confidence            3444433 358888887765444444 44567788887  34444 44456667777665322   11222333345677


Q ss_pred             EEEEeCCCCEEEEE-eCCCcEEEEECCCCceeEEeccCCCcEEEEEEcCCCCcEEEEEcCCCCCeEEEEECCCCcEEEEe
Q 014934          296 GLKWSYDNRELASG-GNDNRLFVWNQHSTQPVLKYCEHTAAVKAIAWSPHLHGLLASGGGTADRCIRFWNTTTNTHLSCM  374 (415)
Q Consensus       296 ~l~~spdg~~lasg-~~dg~I~iwd~~~~~~~~~~~~h~~~V~~l~~sp~~~~llasggg~~d~~I~iwd~~t~~~~~~~  374 (415)
                      +|++.+.++.|..+ ...+.|.+.++........+........+++..|....++.+..| ..+.|.-.++........+
T Consensus        81 glAvD~~~~~lY~~d~~~~~I~v~~~~g~~~~~~~~~~~~~P~~l~vd~~~g~ly~~~~~-~~~~I~r~~~dGs~~~~l~  159 (266)
T d1ijqa1          81 GLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWG-TPAKIKKGGLNGVDIYSLV  159 (266)
T ss_dssp             EEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECS-SSCEEEEEETTSCCEEEEE
T ss_pred             eEEEeeccceEEEEecCCCEEEeEecCCceEEEEEcCCCCCcceEEEEcccCeEEEeccC-CCcceeEeccCCCceeccc
Confidence            89998766655544 556789999998766555555556678999999987778877643 4567887887655444444


Q ss_pred             e-CCCCEEEEEECCCCCeEEEEEecCCCcEEEEECCCC
Q 014934          375 D-TGSQVCNLVWSKNVNELVSTHGYSQNQIIVWRYPTM  411 (415)
Q Consensus       375 ~-~~~~V~~l~~s~~~~~l~s~~g~~dg~I~vw~~~s~  411 (415)
                      . .-....++++++.++.|..+ ....+.|...++...
T Consensus       160 ~~~~~~p~gl~iD~~~~~lYw~-d~~~~~I~~~~~dG~  196 (266)
T d1ijqa1         160 TENIQWPNGITLDLLSGRLYWV-DSKLHSISSIDVNGG  196 (266)
T ss_dssp             CSSCSCEEEEEEETTTTEEEEE-ETTTTEEEEEETTSC
T ss_pred             ccccceeeEEEeeccccEEEEe-cCCcCEEEEEECCCC
Confidence            3 33567899999988888775 355678888887543


No 93 
>d1qfma1 b.69.7.1 (A:1-430) Prolyl oligopeptidase, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}
Probab=95.74  E-value=0.73  Score=42.17  Aligned_cols=255  Identities=13%  Similarity=0.045  Sum_probs=136.4

Q ss_pred             CceeccCCCCCC--CcceeEeecCC-CcEEEEEc--CC----eEEEEECCCCCeEEeEecCCCCCeEEEEEcCCCCeEEE
Q 014934          155 PYKILDAPALQD--DFYLNLVDWSS-HNVLAVGL--GN----CVYLWNACSSKVTKLCDLGIDDSVCSVGWANRNTHLAV  225 (415)
Q Consensus       155 p~~~ld~~~l~~--~~~i~~l~ws~-~~~la~~~--d~----~V~iwd~~~~~~~~~~~~~~~~~V~~v~~sp~g~~la~  225 (415)
                      ..-+||...+..  .+++..+++|| ++.+|.+.  +|    .|+++|+.+++.+.... . ......++|.+|++.|+.
T Consensus       110 ~evllD~n~la~~~~~~~~~~~~Spd~~~la~s~d~~G~e~~~l~v~Dl~tg~~~~~~i-~-~~~~~~~~W~~D~~~~~Y  187 (430)
T d1qfma1         110 ARVFLDPNILSDDGTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVL-E-RVKFSCMAWTHDGKGMFY  187 (430)
T ss_dssp             CEEEECGGGGCSSSCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEE-E-EECSCCEEECTTSSEEEE
T ss_pred             eeeecchhhhcccccceecceEecCCCCEEEEEeccccCchheeEEeccCcceeccccc-c-cccccceEEcCCCCEEEE
Confidence            344566544443  34455667888 78888874  23    59999999998765332 1 122357899999998776


Q ss_pred             EECC----------------CcEEEEECCCCe--eeEEecCC--CccEEEEEee--CCEEEEEe---CCCc--EEEEECC
Q 014934          226 GTSH----------------GKVQIWDASRCK--RVRTMEGH--RLRVGALAWS--SSLLSSGS---RDKS--ILQRDIR  278 (415)
Q Consensus       226 g~~d----------------g~V~iwd~~~~~--~~~~l~~h--~~~V~~l~~~--~~~l~sgs---~dg~--I~iwd~~  278 (415)
                      ...+                ..|..+.+.+..  .+..+...  ...+..+..+  +++++...   .++.  +.+.|+.
T Consensus       188 ~~~~~~~~~~~~~~~~~~~~~~v~~h~lgt~~~~d~~v~~e~d~~~~~~~~~~s~d~~~l~i~~~~~~~~~~~~~~~d~~  267 (430)
T d1qfma1         188 NAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQ  267 (430)
T ss_dssp             EECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGG
T ss_pred             EEeccccCcccccccccCCcceEEEEECCCCccccccccccccCCceEEeeeccCCcceeeEEeeccCCccEEEEEeeCC
Confidence            5432                247777776642  23334433  2334455444  45554332   2233  4444554


Q ss_pred             CCCc-------cEEEeccccCCeEEEEEeCCCCEEEEEe---CCCcEEEEECCCCce--eEE-eccCCCcEEEEEEcCCC
Q 014934          279 AQED-------FVSKLSGHKSEVCGLKWSYDNRELASGG---NDNRLFVWNQHSTQP--VLK-YCEHTAAVKAIAWSPHL  345 (415)
Q Consensus       279 ~~~~-------~~~~~~~h~~~V~~l~~spdg~~lasg~---~dg~I~iwd~~~~~~--~~~-~~~h~~~V~~l~~sp~~  345 (415)
                      ....       ...........+.-+. +.++.+++...   .++.|...++.+...  ... +..+...+..-.+...+
T Consensus       268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Tn~~a~~~~L~~~~~~~~~~~~w~~vi~~~~~~~~~~~~~~~~  346 (430)
T d1qfma1         268 QESNGITGILKWVKLIDNFEGEYDYVT-NEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRS  346 (430)
T ss_dssp             GSSSSSCSSCCCEEEECSSSSCEEEEE-EETTEEEEEECTTCTTCEEEEEETTBCCGGGCEEEECCCSSCEEEEEEEETT
T ss_pred             CcccccccccceeEeecccccceEEEe-cCCceeecccCcccccceeEEecCCCCccccceEEecccCcceeeeEEEEEC
Confidence            3221       1222223233333332 22333333332   346777777765432  122 33455555544444444


Q ss_pred             CcEEEEEcCCCCCeEEEEECCCCcEEEEee-CCCCEEEEEECCCCCeEEEEEec--CCCcEEEEECCCCc
Q 014934          346 HGLLASGGGTADRCIRFWNTTTNTHLSCMD-TGSQVCNLVWSKNVNELVSTHGY--SQNQIIVWRYPTMS  412 (415)
Q Consensus       346 ~~llasggg~~d~~I~iwd~~t~~~~~~~~-~~~~V~~l~~s~~~~~l~s~~g~--~dg~I~vw~~~s~~  412 (415)
                      .+|++..-...-..|++++..+++...... ....|..+...++...+.....+  .-.++.-+|+.+.+
T Consensus       347 ~~lvl~~~~~~~~~l~v~~~~~~~~~~~~~~~~~sv~~~~~~~~~~~~~~~~ss~~tP~~~y~~Dl~t~~  416 (430)
T d1qfma1         347 NFLVLCYLHDVKNTLQLHDLATGALLKIFPLEVGSVVGYSGQKKDTEIFYQFTSFLSPGIIYHCDLTKEE  416 (430)
T ss_dssp             TEEEEEEEETTEEEEEEEETTTCCEEEEECCCSSEEEEEECCTTCSEEEEEEECSSCCCEEEEEETTSSS
T ss_pred             CEEEEEEEcCCEeEEEEEECCCCcEEEecCCCCceEeeccCCCCCCEEEEEEcCCCCCCeEEEEECCCCC
Confidence            556665431123568999999887655443 23446666666666665542221  13578888887653


No 94 
>d1h6la_ b.68.3.1 (A:) Thermostable phytase (3-phytase) {Bacillus amyloliquefaciens [TaxId: 1390]}
Probab=95.50  E-value=0.79  Score=40.92  Aligned_cols=185  Identities=11%  Similarity=0.170  Sum_probs=109.3

Q ss_pred             CCCeEEEEECCCcEEEEECCCCeeeEEecCCCccEEEEEee------C--CEEEEEe-CC---CcEEEEECCCCCccEEE
Q 014934          219 RNTHLAVGTSHGKVQIWDASRCKRVRTMEGHRLRVGALAWS------S--SLLSSGS-RD---KSILQRDIRAQEDFVSK  286 (415)
Q Consensus       219 ~g~~la~g~~dg~V~iwd~~~~~~~~~l~~h~~~V~~l~~~------~--~~l~sgs-~d---g~I~iwd~~~~~~~~~~  286 (415)
                      +..+++.....+-|.+||+. |+.+..+.  .+++..|..-      +  ..++.++ ++   .+|.+|.+......+..
T Consensus        39 ~~SlI~gTdK~~Gl~vYdL~-G~~l~~~~--~Gr~NNVDvr~~~~l~~~~~di~vasnR~~~~~~l~~~~id~~~~~l~~  115 (353)
T d1h6la_          39 QNSKLITTNKKSGLAVYSLE-GKMLHSYH--TGKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGTLQS  115 (353)
T ss_dssp             GGCEEEEEETTSCCEEEETT-CCEEEECC--SSCEEEEEEEEEEEETTEEEEEEEEEECCTTTCEEEEEEEETTTTEEEE
T ss_pred             CccEEEEEcCcCCEEEEcCC-CcEEEecc--cCCcCccccccccccCCcceEEEEEeCCcCcceeEEEEEecCccccccc
Confidence            44566655666679999985 78777765  3566666543      2  1233443 33   35778877643323333


Q ss_pred             eccc-------cCCeEEEEE--eCC-CC-EEEEEeCCCcEEEEECC---CC----ceeEEeccCCCcEEEEEEcCCCCcE
Q 014934          287 LSGH-------KSEVCGLKW--SYD-NR-ELASGGNDNRLFVWNQH---ST----QPVLKYCEHTAAVKAIAWSPHLHGL  348 (415)
Q Consensus       287 ~~~h-------~~~V~~l~~--spd-g~-~lasg~~dg~I~iwd~~---~~----~~~~~~~~h~~~V~~l~~sp~~~~l  348 (415)
                      +...       ...+.++|+  ++. |. ++++...+|.+..|.+.   .+    +.+..+. -...+-.|++.+....|
T Consensus       116 ~~~~~~p~~~~~~~vYGlc~y~~~~~g~~~afv~~k~G~v~q~~l~~~~~g~v~~~lvr~f~-~~~q~EGCVvDde~~~L  194 (353)
T d1h6la_         116 ITDPNRPIASAIDEVYGFSLYHSQKTGKYYAMVTGKEGEFEQYELNADKNGYISGKKVRAFK-MNSQTEGMAADDEYGSL  194 (353)
T ss_dssp             CSCSSSCEECSSSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSSEEEEEEEEEE-CSSCEEEEEEETTTTEE
T ss_pred             ccccccccccccCcceEEEEEecCCCCeEEEEEEcCCceEEEEEEEcCCCCceeeEeeeccC-CCCccceEEEeCCCCcE
Confidence            3221       124777887  554 54 45667778988888763   33    3444553 34568889999888767


Q ss_pred             EEEEcCCCCCeEEEEECCC-----CcEEEEeeC---CCCEEEEEECC--CCC-eEEEEEecCCCcEEEEECCCC
Q 014934          349 LASGGGTADRCIRFWNTTT-----NTHLSCMDT---GSQVCNLVWSK--NVN-ELVSTHGYSQNQIIVWRYPTM  411 (415)
Q Consensus       349 lasggg~~d~~I~iwd~~t-----~~~~~~~~~---~~~V~~l~~s~--~~~-~l~s~~g~~dg~I~vw~~~s~  411 (415)
                      +++-   ++..|..++..-     +..+.....   ...+-+|+.-.  ++. +|+++ ...++++.||+-.+.
T Consensus       195 yisE---E~~Giw~~~a~~~~~~~~~~i~~~~g~~l~~D~EGlaiy~~~~~~GylivS-sQG~n~f~vydr~~~  264 (353)
T d1h6la_         195 YIAE---EDEAIWKFSAEPDGGSNGTVIDRADGRHLTPDIEGLTIYYAADGKGYLLAS-SQGNSSYAIYERQGQ  264 (353)
T ss_dssp             EEEE---TTTEEEEEESSTTSCSCCEEEEECSSSSCCSCEEEEEEEECGGGCEEEEEE-EGGGTEEEEEESSTT
T ss_pred             EEec---CccceEEEEeccCCCccceeeecccCccccCCccccEEEEcCCCCeEEEEE-cCCCCeEEEEecCCC
Confidence            7754   566666666531     223323222   34677776543  333 66655 345789999997653


No 95 
>d1xipa_ b.69.14.1 (A:) Nucleoporin NUP159 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=95.11  E-value=1.1  Score=40.34  Aligned_cols=176  Identities=9%  Similarity=-0.012  Sum_probs=102.9

Q ss_pred             CCeEEEEEcCCCCeEEEEECCCcEEEEECCC-----------CeeeEEecCCCccEEEEEeeCCEEEEEeCCCcEEEEEC
Q 014934          209 DSVCSVGWANRNTHLAVGTSHGKVQIWDASR-----------CKRVRTMEGHRLRVGALAWSSSLLSSGSRDKSILQRDI  277 (415)
Q Consensus       209 ~~V~~v~~sp~g~~la~g~~dg~V~iwd~~~-----------~~~~~~l~~h~~~V~~l~~~~~~l~sgs~dg~I~iwd~  277 (415)
                      ....-+++++...++++|+.++ +.|..+..           ........  -..|..++|+++.|+... ++.+..++.
T Consensus        37 ~~~~LLAVsn~~GLl~aa~~~~-l~V~~t~~l~~~~~~~~~~~~~~~~~~--ip~v~~vafs~d~l~v~~-~~~l~~~~~  112 (381)
T d1xipa_          37 ASLQNLDISNSKSLFVAASGSK-AVVGELQLLRDHITSDSTPLTFKWEKE--IPDVIFVCFHGDQVLVST-RNALYSLDL  112 (381)
T ss_dssp             SCCBCEEEETTTTEEEEEETTE-EEEEEHHHHHHHHHSSSCCCCCSEEEE--CTTEEEEEEETTEEEEEE-SSEEEEEES
T ss_pred             cccceEEEeCCCCEEEEECCCE-EEEEEHHHHHHHhhccCCCCcceeccC--CCCeEEEEeeCCEEEEEe-CCCEEEEEe
Confidence            4566788888777888888775 56665321           11111111  136899999988877764 456888887


Q ss_pred             CCCCccEEEeccccCCeEEEEEeCCCCEEEEEeCCCcEEEEECCCCceeEEec-----cCCCcEEEEEEcCCCCcEEEEE
Q 014934          278 RAQEDFVSKLSGHKSEVCGLKWSYDNRELASGGNDNRLFVWNQHSTQPVLKYC-----EHTAAVKAIAWSPHLHGLLASG  352 (415)
Q Consensus       278 ~~~~~~~~~~~~h~~~V~~l~~spdg~~lasg~~dg~I~iwd~~~~~~~~~~~-----~h~~~V~~l~~sp~~~~llasg  352 (415)
                      ..-.. ......-..++..+.++|.  .++....+|.+.++++.+++......     .-.+.+.+++|++.+..+++..
T Consensus       113 ~~l~~-~~~~~~~~~~~~~~~~~p~--~~~l~~~~~~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~v~ws~kgkq~v~~~  189 (381)
T d1xipa_         113 EELSE-FRTVTSFEKPVFQLKNVNN--TLVILNSVNDLSALDLRTKSTKQLAQNVTSFDVTNSQLAVLLKDRSFQSFAWR  189 (381)
T ss_dssp             SSTTC-EEEEEECSSCEEEEEECSS--EEEEEETTSEEEEEETTTCCEEEEEESEEEEEECSSEEEEEETTSCEEEEEEE
T ss_pred             ecccc-ccccccccccccceecCCc--eeEEEecCCCEEEEEeccCccccccCCcceEEecCCceEEEEeCCcEEEEEeC
Confidence            76543 2333334567888888774  57777788999999998875432211     1235577777777766554422


Q ss_pred             cCCCCCeEEEE-ECCCCcEEEE-eeCCCCEEEEEECCCCCeEEEE
Q 014934          353 GGTADRCIRFW-NTTTNTHLSC-MDTGSQVCNLVWSKNVNELVST  395 (415)
Q Consensus       353 gg~~d~~I~iw-d~~t~~~~~~-~~~~~~V~~l~~s~~~~~l~s~  395 (415)
                      |   + ...+- ++.....+.. .+....|.++.|-.+..++++-
T Consensus       190 g---~-~~q~k~~i~~~~~~~~p~~~~~~v~sI~WL~~~~F~vvy  230 (381)
T d1xipa_         190 N---G-EMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAVF  230 (381)
T ss_dssp             T---T-EEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEEE
T ss_pred             C---C-ceeeccCCCCccccCCCcCCCcceeEEEEecCceEEEEE
Confidence            1   1 11110 1111100000 0123468899999887776653


No 96 
>d1v04a_ b.68.6.2 (A:) Serum paraoxonase/arylesterase 1, PON1 {Rabit (Oryctolagus cuniculus) [TaxId: 9986]}
Probab=94.69  E-value=1.3  Score=39.15  Aligned_cols=165  Identities=13%  Similarity=0.070  Sum_probs=93.8

Q ss_pred             CCcEEEEECCCCee-eEEe--cCC-----CccEEEEEee----CC-EEEEEe---CCCcEEEEECCCCCccEEE---ec-
Q 014934          229 HGKVQIWDASRCKR-VRTM--EGH-----RLRVGALAWS----SS-LLSSGS---RDKSILQRDIRAQEDFVSK---LS-  288 (415)
Q Consensus       229 dg~V~iwd~~~~~~-~~~l--~~h-----~~~V~~l~~~----~~-~l~sgs---~dg~I~iwd~~~~~~~~~~---~~-  288 (415)
                      .|.|.++|+.+.+. ...+  .+.     .-....+...    +. +|++..   ...+|.++++......+..   +. 
T Consensus        67 ~G~i~~~dl~~~~~~~~~l~~~~~~~~~~~f~PhGi~l~~~~dg~~~L~vvnH~~~~~~ieif~~~~~~~~l~~~~~v~~  146 (340)
T d1v04a_          67 SGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIRH  146 (340)
T ss_dssp             CCEEEEEETTSSSCCEEECEEECSSSCGGGCCEEEEEEEECTTCCEEEEEEECSTTCCEEEEEEEETTTTEEEEEEEECC
T ss_pred             CCeEEEEecCCCCCcceEEEecCCCCCCcceeccceeEEEcCCCcEEEEEEeccCCCceeEEEEEeCCCCeEEEEeecCC
Confidence            47888888865432 1111  111     1123344331    22 455443   3456888877654422221   11 


Q ss_pred             cccCCeEEEEEeCCCCEEEEEeC---------------CCcEEEEECCCCceeEEeccCCCcEEEEEEcCCCCcEEEEEc
Q 014934          289 GHKSEVCGLKWSYDNRELASGGN---------------DNRLFVWNQHSTQPVLKYCEHTAAVKAIAWSPHLHGLLASGG  353 (415)
Q Consensus       289 ~h~~~V~~l~~spdg~~lasg~~---------------dg~I~iwd~~~~~~~~~~~~h~~~V~~l~~sp~~~~llasgg  353 (415)
                      ......+.+.+..++.+++|-..               -+...+|....++. ......-...+.|+++|+++.++++..
T Consensus       147 ~~~~~pNDv~~~~~g~fy~Tnd~~~~~~~~~~~e~~~~~~~g~v~~~~~~~~-~~~~~~l~~pNGI~~s~d~~~lyVa~t  225 (340)
T d1v04a_         147 KLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSPNDV-RVVAEGFDFANGINISPDGKYVYIAEL  225 (340)
T ss_dssp             TTCSSEEEEEEEETTEEEEEESCSCCSHHHHHHHHHTTCCCEEEEEECSSCE-EEEEEEESSEEEEEECTTSSEEEEEEG
T ss_pred             ccccCccceEEecCCCEEEecCccCcChhhhhhhHhhcCCceeEEEEcCCce-EEEcCCCCccceeEECCCCCEEEEEeC
Confidence            12245788999889988888311               01233443333332 222233456799999999998888876


Q ss_pred             CCCCCeEEEEECCCCcE---EEEeeCCCCEEEEEECC-CCCeEEEEE
Q 014934          354 GTADRCIRFWNTTTNTH---LSCMDTGSQVCNLVWSK-NVNELVSTH  396 (415)
Q Consensus       354 g~~d~~I~iwd~~t~~~---~~~~~~~~~V~~l~~s~-~~~~l~s~~  396 (415)
                        ..+.|++|++.....   ...+......-++.+.+ +|...+++|
T Consensus       226 --~~~~i~~y~~~~~~~l~~~~~~~l~~~pDNi~~d~~~g~lwva~~  270 (340)
T d1v04a_         226 --LAHKIHVYEKHANWTLTPLRVLSFDTLVDNISVDPVTGDLWVGCH  270 (340)
T ss_dssp             --GGTEEEEEEECTTSCEEEEEEEECSSEEEEEEECTTTCCEEEEEE
T ss_pred             --CCCeEEEEEeCCCcccceEEEecCCCCCCccEEecCCCEEEEEEC
Confidence              788999999875432   23334566778899976 566666543


No 97 
>d1h6la_ b.68.3.1 (A:) Thermostable phytase (3-phytase) {Bacillus amyloliquefaciens [TaxId: 1390]}
Probab=94.23  E-value=1.7  Score=38.57  Aligned_cols=183  Identities=10%  Similarity=0.136  Sum_probs=111.3

Q ss_pred             cCCeEEEEECCCCCeEEeEecCCCCCeEEEEEcC------CCCeEEEEEC--CC--cEEEEECC-CCeeeEEecCC----
Q 014934          185 LGNCVYLWNACSSKVTKLCDLGIDDSVCSVGWAN------RNTHLAVGTS--HG--KVQIWDAS-RCKRVRTMEGH----  249 (415)
Q Consensus       185 ~d~~V~iwd~~~~~~~~~~~~~~~~~V~~v~~sp------~g~~la~g~~--dg--~V~iwd~~-~~~~~~~l~~h----  249 (415)
                      -.+.|++||+. |+.+....   .+.+..|..-.      ...-|++++.  ++  .|.+|.+. ....+..+...    
T Consensus        48 K~~Gl~vYdL~-G~~l~~~~---~Gr~NNVDvr~~~~l~~~~~di~vasnR~~~~~~l~~~~id~~~~~l~~~~~~~~p~  123 (353)
T d1h6la_          48 KKSGLAVYSLE-GKMLHSYH---TGKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGTLQSITDPNRPI  123 (353)
T ss_dssp             TTSCCEEEETT-CCEEEECC---SSCEEEEEEEEEEEETTEEEEEEEEEECCTTTCEEEEEEEETTTTEEEECSCSSSCE
T ss_pred             CcCCEEEEcCC-CcEEEecc---cCCcCccccccccccCCcceEEEEEeCCcCcceeEEEEEecCccccccccccccccc
Confidence            34569999985 66666554   34666665432      2234556653  23  57778774 22334444321    


Q ss_pred             ---CccEEEEEe--e---CC-EEEEEeCCCcEEEEECCCCC------ccEEEeccccCCeEEEEEeCCCCEEEEEeCCCc
Q 014934          250 ---RLRVGALAW--S---SS-LLSSGSRDKSILQRDIRAQE------DFVSKLSGHKSEVCGLKWSYDNRELASGGNDNR  314 (415)
Q Consensus       250 ---~~~V~~l~~--~---~~-~l~sgs~dg~I~iwd~~~~~------~~~~~~~~h~~~V~~l~~spdg~~lasg~~dg~  314 (415)
                         ...+..+|.  +   +. ++++...+|.+..|.+....      ..++.+. -..++.++.+....+.|..+-++.-
T Consensus       124 ~~~~~~vYGlc~y~~~~~g~~~afv~~k~G~v~q~~l~~~~~g~v~~~lvr~f~-~~~q~EGCVvDde~~~LyisEE~~G  202 (353)
T d1h6la_         124 ASAIDEVYGFSLYHSQKTGKYYAMVTGKEGEFEQYELNADKNGYISGKKVRAFK-MNSQTEGMAADDEYGSLYIAEEDEA  202 (353)
T ss_dssp             ECSSSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSSEEEEEEEEEE-CSSCEEEEEEETTTTEEEEEETTTE
T ss_pred             ccccCcceEEEEEecCCCCeEEEEEEcCCceEEEEEEEcCCCCceeeEeeeccC-CCCccceEEEeCCCCcEEEecCccc
Confidence               123556665  3   22 57778889999888774321      1223332 3467999999999999999988877


Q ss_pred             EEEEECCC-----CceeEEecc--CCCcEEEEEEcC--CCC-cEEEEEcCCCCCeEEEEECCCC-cEEEEe
Q 014934          315 LFVWNQHS-----TQPVLKYCE--HTAAVKAIAWSP--HLH-GLLASGGGTADRCIRFWNTTTN-THLSCM  374 (415)
Q Consensus       315 I~iwd~~~-----~~~~~~~~~--h~~~V~~l~~sp--~~~-~llasggg~~d~~I~iwd~~t~-~~~~~~  374 (415)
                      |..+++.-     ...+....+  ..+.+-.|+.-.  ++. +|++|..  .+.+..+||..+. +.+..+
T Consensus       203 iw~~~a~~~~~~~~~~i~~~~g~~l~~D~EGlaiy~~~~~~GylivSsQ--G~n~f~vydr~~~~~~~g~F  271 (353)
T d1h6la_         203 IWKFSAEPDGGSNGTVIDRADGRHLTPDIEGLTIYYAADGKGYLLASSQ--GNSSYAIYERQGQNKYVADF  271 (353)
T ss_dssp             EEEEESSTTSCSCCEEEEECSSSSCCSCEEEEEEEECGGGCEEEEEEEG--GGTEEEEEESSTTCCEEEEE
T ss_pred             eEEEEeccCCCccceeeecccCccccCCccccEEEEcCCCCeEEEEEcC--CCCeEEEEecCCCccccceE
Confidence            77776542     122222222  456788777643  333 6777776  5899999999773 555554


No 98 
>d1zgka1 b.68.11.1 (A:322-609) Kelch-like ECH-associated protein 1, KEAP1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=93.39  E-value=1.1  Score=37.86  Aligned_cols=214  Identities=13%  Similarity=0.109  Sum_probs=99.9

Q ss_pred             CeEEEEECCCCCeEEeEecCCC-CCeEEEEEcCCCCeEEEEEC---------CCcEEEEECCCCeeeE--EecCCCccEE
Q 014934          187 NCVYLWNACSSKVTKLCDLGID-DSVCSVGWANRNTHLAVGTS---------HGKVQIWDASRCKRVR--TMEGHRLRVG  254 (415)
Q Consensus       187 ~~V~iwd~~~~~~~~~~~~~~~-~~V~~v~~sp~g~~la~g~~---------dg~V~iwd~~~~~~~~--~l~~h~~~V~  254 (415)
                      ..|.+||..+++...+-.+... ..-..+.+  +++.++.|+.         -..+.+||..+.+...  .+......-.
T Consensus        19 ~~~~~yd~~t~~W~~~~~~p~~R~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~w~~~~~~p~~r~~~~   96 (288)
T d1zgka1          19 SYLEAYNPSNGTWLRLADLQVPRSGLAGCVV--GGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCAPMSVPRNRIG   96 (288)
T ss_dssp             CCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCEEEETTEEEECCCEEEEETTTTEEEECCCCSSCCBTCE
T ss_pred             ceEEEEECCCCeEEECCCCCCccceeEEEEE--CCEEEEEeCcccCCCCccccchhhhcccccccccccccccceeccee
Confidence            3688999999887776544321 12222222  5666666652         2357788887654332  2221122223


Q ss_pred             EEEeeCCEEEEEeCCCc-----EEEEECCCCCccEEEeccccCC--eEEEEEeCCCCEEEEEeCC-----CcEEEEECCC
Q 014934          255 ALAWSSSLLSSGSRDKS-----ILQRDIRAQEDFVSKLSGHKSE--VCGLKWSYDNRELASGGND-----NRLFVWNQHS  322 (415)
Q Consensus       255 ~l~~~~~~l~sgs~dg~-----I~iwd~~~~~~~~~~~~~h~~~--V~~l~~spdg~~lasg~~d-----g~I~iwd~~~  322 (415)
                      +..+.+.+++.|+.++.     +..+|..+..  ..........  -.++... ++.+++.|+.+     ..+..||..+
T Consensus        97 ~~~~~~~i~~~gg~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~r~~~~~~~~-~~~~~~~GG~~~~~~~~~~~~~d~~~  173 (288)
T d1zgka1          97 VGVIDGHIYAVGGSHGCIHHNSVERYEPERDE--WHLVAPMLTRRIGVGVAVL-NRLLYAVGGFDGTNRLNSAECYYPER  173 (288)
T ss_dssp             EEEETTEEEEECCEETTEECCCEEEEETTTTE--EEECCCCSSCCBSCEEEEE-TTEEEEECCBCSSCBCCCEEEEETTT
T ss_pred             ccccceeeEEecceecccccceeeeeccccCc--cccccccccccccceeeee-eecceEecCcccccccceEEEeeccc
Confidence            34445556665554443     4446665543  1111111111  1112222 44555555543     3578888876


Q ss_pred             CceeEEeccCC--CcEEEEEEcCCCCcEEEEEcCCC---CCeEEEEECCCCcEEEEeeCC-CCE-EEEEECCCCCeEEEE
Q 014934          323 TQPVLKYCEHT--AAVKAIAWSPHLHGLLASGGGTA---DRCIRFWNTTTNTHLSCMDTG-SQV-CNLVWSKNVNELVST  395 (415)
Q Consensus       323 ~~~~~~~~~h~--~~V~~l~~sp~~~~llasggg~~---d~~I~iwd~~t~~~~~~~~~~-~~V-~~l~~s~~~~~l~s~  395 (415)
                      .+... .....  ....+++...  ..+++.+|...   -..+..+|..+.+....-... ... .+++. .+++.++. 
T Consensus       174 ~~~~~-~~~~~~~~~~~~~~~~~--~~i~i~GG~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~-~~~~l~v~-  248 (288)
T d1zgka1         174 NEWRM-ITAMNTIRSGAGVCVLH--NCIYAAGGYDGQDQLNSVERYDVETETWTFVAPMKHRRSALGITV-HQGRIYVL-  248 (288)
T ss_dssp             TEEEE-CCCCSSCCBSCEEEEET--TEEEEECCBCSSSBCCCEEEEETTTTEEEECCCCSSCCBSCEEEE-ETTEEEEE-
T ss_pred             ccccc-cccccccccccccccee--eeEEEecCccccccccceeeeeecceeeecccCccCcccceEEEE-ECCEEEEE-
Confidence            54322 11111  1111222222  24666664211   235677888776543321111 111 12222 25666665 


Q ss_pred             EecCCC-----cEEEEECCCC
Q 014934          396 HGYSQN-----QIIVWRYPTM  411 (415)
Q Consensus       396 ~g~~dg-----~I~vw~~~s~  411 (415)
                       |+.++     .|.+||..+.
T Consensus       249 -GG~~~~~~~~~v~~yd~~~~  268 (288)
T d1zgka1         249 -GGYDGHTFLDSVECYDPDTD  268 (288)
T ss_dssp             -CCBCSSCBCCEEEEEETTTT
T ss_pred             -ecCCCCeecceEEEEECCCC
Confidence             44333     4788888764


No 99 
>d1flga_ b.70.1.1 (A:) Ethanol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}
Probab=93.13  E-value=3.7  Score=38.89  Aligned_cols=56  Identities=7%  Similarity=0.001  Sum_probs=42.9

Q ss_pred             CCeEEEEECCCCcEEEEeeCCCCEEEEEECCCCCeEEEEEecCCCcEEEEECCCCccc
Q 014934          357 DRCIRFWNTTTNTHLSCMDTGSQVCNLVWSKNVNELVSTHGYSQNQIIVWRYPTMSKV  414 (415)
Q Consensus       357 d~~I~iwd~~t~~~~~~~~~~~~V~~l~~s~~~~~l~s~~g~~dg~I~vw~~~s~~~l  414 (415)
                      .|.|.-+|+.+|+.+.....+.++.+-..+..+..+++  |..||.++.+|..++++|
T Consensus       465 ~G~l~AiD~~TG~i~W~~~~~~p~~~g~lstagglVF~--Gt~dg~l~A~Da~TGe~L  520 (582)
T d1flga_         465 VGSLRAMDPVSGKVVWEHKEHLPLWAGVLATAGNLVFT--GTGDGYFKAFDAKSGKEL  520 (582)
T ss_dssp             SEEEEEECTTTCCEEEEEEESSCCCSCCEEETTTEEEE--ECTTSEEEEEETTTCCEE
T ss_pred             CCeEEEEcCCCCcEEeecCCCCCCccceeEEcCCeEEE--eCCCCeEEEEECCCCcEe
Confidence            36788899999999888876555443333456666666  888999999999999876


No 100
>d1v04a_ b.68.6.2 (A:) Serum paraoxonase/arylesterase 1, PON1 {Rabit (Oryctolagus cuniculus) [TaxId: 9986]}
Probab=90.47  E-value=5.2  Score=35.00  Aligned_cols=141  Identities=14%  Similarity=0.009  Sum_probs=82.3

Q ss_pred             CCcEEEEECCCCCccEEEeccc-------cCCeEEEEE--eCCCC-EEEEEe---CCCcEEEEECCCCcee----EEec-
Q 014934          269 DKSILQRDIRAQEDFVSKLSGH-------KSEVCGLKW--SYDNR-ELASGG---NDNRLFVWNQHSTQPV----LKYC-  330 (415)
Q Consensus       269 dg~I~iwd~~~~~~~~~~~~~h-------~~~V~~l~~--spdg~-~lasg~---~dg~I~iwd~~~~~~~----~~~~-  330 (415)
                      .|.|.++|+.........+.-.       .-...++..  .++|. +|++..   ...+|.||++......    ..+. 
T Consensus        67 ~G~i~~~dl~~~~~~~~~l~~~~~~~~~~~f~PhGi~l~~~~dg~~~L~vvnH~~~~~~ieif~~~~~~~~l~~~~~v~~  146 (340)
T d1v04a_          67 SGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIRH  146 (340)
T ss_dssp             CCEEEEEETTSSSCCEEECEEECSSSCGGGCCEEEEEEEECTTCCEEEEEEECSTTCCEEEEEEEETTTTEEEEEEEECC
T ss_pred             CCeEEEEecCCCCCcceEEEecCCCCCCcceeccceeEEEcCCCcEEEEEEeccCCCceeEEEEEeCCCCeEEEEeecCC
Confidence            5889999998765333332211       123455554  34565 344443   3457888887543321    1221 


Q ss_pred             cCCCcEEEEEEcCCCCcEEEEEc-CCC------------CCeEEEEECCCCcEEEEeeCCCCEEEEEECCCCCeEEEEEe
Q 014934          331 EHTAAVKAIAWSPHLHGLLASGG-GTA------------DRCIRFWNTTTNTHLSCMDTGSQVCNLVWSKNVNELVSTHG  397 (415)
Q Consensus       331 ~h~~~V~~l~~sp~~~~llasgg-g~~------------d~~I~iwd~~t~~~~~~~~~~~~V~~l~~s~~~~~l~s~~g  397 (415)
                      ......+.|++..++. +++|-. ...            -+...+|....++...........++++++|++++|+++ .
T Consensus       147 ~~~~~pNDv~~~~~g~-fy~Tnd~~~~~~~~~~~e~~~~~~~g~v~~~~~~~~~~~~~~l~~pNGI~~s~d~~~lyVa-~  224 (340)
T d1v04a_         147 KLLPSVNDIVAVGPEH-FYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSPNDVRVVAEGFDFANGINISPDGKYVYIA-E  224 (340)
T ss_dssp             TTCSSEEEEEEEETTE-EEEEESCSCCSHHHHHHHHHTTCCCEEEEEECSSCEEEEEEEESSEEEEEECTTSSEEEEE-E
T ss_pred             ccccCccceEEecCCC-EEEecCccCcChhhhhhhHhhcCCceeEEEEcCCceEEEcCCCCccceeEECCCCCEEEEE-e
Confidence            2234578898888876 777731 000            122334443444443333445778999999999988886 4


Q ss_pred             cCCCcEEEEECCCC
Q 014934          398 YSQNQIIVWRYPTM  411 (415)
Q Consensus       398 ~~dg~I~vw~~~s~  411 (415)
                      ...++|++|++..-
T Consensus       225 t~~~~i~~y~~~~~  238 (340)
T d1v04a_         225 LLAHKIHVYEKHAN  238 (340)
T ss_dssp             GGGTEEEEEEECTT
T ss_pred             CCCCeEEEEEeCCC
Confidence            56788999988643


No 101
>d2hu7a1 b.69.7.2 (A:9-321) Acylamino-acid-releasing enzyme, N-terminal donain {Aeropyrum pernix [TaxId: 56636]}
Probab=89.63  E-value=4.5  Score=33.03  Aligned_cols=182  Identities=14%  Similarity=0.099  Sum_probs=99.1

Q ss_pred             ceeEeecCCCcEEEEE-cCCeEEEEECCCCCeEEeEecCCCCCeEEE--------EEc-CCCCeEEEEEC-CCcEEEEEC
Q 014934          169 YLNLVDWSSHNVLAVG-LGNCVYLWNACSSKVTKLCDLGIDDSVCSV--------GWA-NRNTHLAVGTS-HGKVQIWDA  237 (415)
Q Consensus       169 ~i~~l~ws~~~~la~~-~d~~V~iwd~~~~~~~~~~~~~~~~~V~~v--------~~s-p~g~~la~g~~-dg~V~iwd~  237 (415)
                      .|.++.+...+++.+| +.+.+.+|-++.|++.++..+..-+-|+.+        .+- +...-++++.- .|.++|++.
T Consensus       105 RI~S~~yddk~vvF~Gased~~~LYviegGklrkL~~vPpFsFVtDI~~d~I~G~g~~~g~~~sfF~adl~SG~lri~tp  184 (313)
T d2hu7a1         105 RILSGVDTGEAVVFTGATEDRVALYALDGGGLRELARLPGFGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGLRVFDS  184 (313)
T ss_dssp             EEEEEEECSSCEEEEEECSSCEEEEEEETTEEEEEEEESSCEEEEEEETTEEEEEEEEETTEEEEEEEETTTEEEEEECC
T ss_pred             EEEEeeecCceEEEecccCCceEEEEEeCCceeeeccCCCcceEEeccCCeEEEEeeecCCcceEEEEecccCCEEEecC
Confidence            3556667776666666 567888888889998888776544444444        332 22223444444 666666666


Q ss_pred             CCCeeeEEecCCCccEEEEEeeCCEEEEEe----CCCcEEEEECCCCCccEEEecc--------ccCCeEEEEEeCCCCE
Q 014934          238 SRCKRVRTMEGHRLRVGALAWSSSLLSSGS----RDKSILQRDIRAQEDFVSKLSG--------HKSEVCGLKWSYDNRE  305 (415)
Q Consensus       238 ~~~~~~~~l~~h~~~V~~l~~~~~~l~sgs----~dg~I~iwd~~~~~~~~~~~~~--------h~~~V~~l~~spdg~~  305 (415)
                      ..+..-......          ++.++++-    ...-| -+|++.+.  ...+.-        ..-+|.-+-+.|++++
T Consensus       185 keGS~~~ay~~~----------gnKV~sdyEt~gEsywi-t~D~~s~~--yerve~P~kd~~sy~p~~I~~~~Y~Pdd~L  251 (313)
T d2hu7a1         185 GEGSFSSASISP----------GMKVTAGLETAREARLV-TVDPRDGS--VEDLELPSKDFSSYRPTAITWLGYLPDGRL  251 (313)
T ss_dssp             SSEEEEEEEECT----------TSCEEEEEEESSCEEEE-EECTTTCC--EEECCCSSCHHHHHCCSEEEEEEECTTSCE
T ss_pred             CCCcccceeEcc----------CceeeeccCCCCceEEE-EEecccCc--eeeeecCcccceeecceEEEeeeeCCCCcE
Confidence            555433322222          22232221    11123 34666554  111111        1234666778999999


Q ss_pred             EEEEeCCCcEEEEECCCCceeEEeccCCCcEEEEEEcCCCCcEEEEEcCCCCCeEEEEECCCCcEE
Q 014934          306 LASGGNDNRLFVWNQHSTQPVLKYCEHTAAVKAIAWSPHLHGLLASGGGTADRCIRFWNTTTNTHL  371 (415)
Q Consensus       306 lasg~~dg~I~iwd~~~~~~~~~~~~h~~~V~~l~~sp~~~~llasggg~~d~~I~iwd~~t~~~~  371 (415)
                      ++.+-.||.-.+|.  +++.+.   ..++.+..+..-  +..++.+.+ +...--++..+.+|+++
T Consensus       252 ~iiakrdG~s~lF~--nGk~in---~p~G~~~gat~i--~~~iyfshs-SL~tP~kI~~~~~~~~~  309 (313)
T d2hu7a1         252 AVVARREGRSAVFI--DGERVE---APQGNHGRVVLW--RGKLVTSHT-SLSTPPRIVSLPSGEPL  309 (313)
T ss_dssp             EEEEEETTEEEEEE--TTEEEC---CCSSEEEEEEEE--TTEEEEEEE-ETTEEEEEEEETTCCEE
T ss_pred             EEEEecCCchheee--cceEec---CCCCcccceEEE--CCEEEEeec-ccCCCceeEEcCCCCcc
Confidence            99999999999987  555443   333333333222  123444432 14444556666666654


No 102
>d1jtdb_ b.69.5.2 (B:) beta-lactamase inhibitor protein-II, BLIP-II {Streptomyces exfoliatus [TaxId: 1905]}
Probab=88.32  E-value=6.2  Score=32.94  Aligned_cols=219  Identities=15%  Similarity=0.143  Sum_probs=103.9

Q ss_pred             eeEeecCCCcEEEEEcCCeEEEEECCCCCeEEeEecCCCCCeEEEEEcCCCCeEEEEECCCcEEEEECCCCeeeEEecCC
Q 014934          170 LNLVDWSSHNVLAVGLGNCVYLWNACSSKVTKLCDLGIDDSVCSVGWANRNTHLAVGTSHGKVQIWDASRCKRVRTMEGH  249 (415)
Q Consensus       170 i~~l~ws~~~~la~~~d~~V~iwd~~~~~~~~~~~~~~~~~V~~v~~sp~g~~la~g~~dg~V~iwd~~~~~~~~~l~~h  249 (415)
                      |..|+-.....++.. ++.|+.|-....-..-.-. .....|..|.--  ..+.+ +..||.+..|..............
T Consensus        28 i~~va~G~~h~~al~-dG~v~~wG~N~~GQlG~~~-~~~~~v~~v~~G--~~~~~-al~dg~v~~wG~~~~gq~~~~~~~  102 (273)
T d1jtdb_          28 VDAIAGGYFHGLALK-GGKVLGWGANLNGQLTMPA-ATQSGVDAIAAG--NYHSL-ALKDGEVIAWGGNEDGQTTVPAEA  102 (273)
T ss_dssp             EEEEEECSSEEEEEE-TTEEEEEECCTTSTTSCCG-GGGSCCCEEEEC--SSEEE-EEETTEEEEEECCTTSTTCCCGGG
T ss_pred             cEEEEccCCEEEEEE-CCEEEEEeCCCCCceeeee-cccccceEEecC--CCcee-eeeeeeeeccCCCcceeecccccc
Confidence            444544444556655 8999999765432211111 112345554431  22222 235899999976432211111111


Q ss_pred             CccEEEEEeeCCEEEEEeCCCcEEEEECCCCCccEEEeccccCCeEEEEEeCCCCEEEEEeCCCcEEEEECCCCceeEEe
Q 014934          250 RLRVGALAWSSSLLSSGSRDKSILQRDIRAQEDFVSKLSGHKSEVCGLKWSYDNRELASGGNDNRLFVWNQHSTQPVLKY  329 (415)
Q Consensus       250 ~~~V~~l~~~~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~spdg~~lasg~~dg~I~iwd~~~~~~~~~~  329 (415)
                      ...+..++......+.. .|+.+..|.-....... ........|..++-.  ...++ ...++.++.|-......+..-
T Consensus       103 ~~~~~~i~~~~~~~~~~-~dg~v~~~g~~~~~~~~-~~~~~~~~v~~~~~~--~~~~~-~~~~g~~~~~G~~~~g~~~~~  177 (273)
T d1jtdb_         103 RSGVDAIAAGAWASYAL-KDGKVIAWGDDSDGQTT-VPAEAQSGVTALDGG--VYTAL-AVKNGGVIAWGDNYFGQTTVP  177 (273)
T ss_dssp             GSSCCEEEEETTEEEEE-ETTEEEEEECCTTSTTS-CCGGGGSSEEEEEEC--SSEEE-EEETTEEEEEECCTTSTTSCC
T ss_pred             ccceeEEeeeccccccc-ccccceecccCCCCcee-eeccCCceEEEEecc--ceeee-eecccceeEeecccCCccccc
Confidence            22344444444443333 48899999754433211 111222345444432  22333 334678888876543222222


Q ss_pred             ccCCCcEEEEEEcCCCCcEEEEEcCCCCCeEEEEECCC-CcEEEEeeCCCCEEEEEECCCCCeEEEEEecCCCcEEEEEC
Q 014934          330 CEHTAAVKAIAWSPHLHGLLASGGGTADRCIRFWNTTT-NTHLSCMDTGSQVCNLVWSKNVNELVSTHGYSQNQIIVWRY  408 (415)
Q Consensus       330 ~~h~~~V~~l~~sp~~~~llasggg~~d~~I~iwd~~t-~~~~~~~~~~~~V~~l~~s~~~~~l~s~~g~~dg~I~vw~~  408 (415)
                      ......|..|+....  +.++.    .|+.|+.|=... ++.-........|..++-.... .++.    .||.|..|--
T Consensus       178 ~~~~~~v~~Is~G~~--h~~~l----~dG~v~~WG~n~~Gql~~~~~~~~~v~~I~~G~~~-~~~l----~~g~v~~WG~  246 (273)
T d1jtdb_         178 AEAQSGVDDVAGGIF--HSLAL----KDGKVIAWGDNRYKQTTVPTEALSGVSAIASGEWY-SLAL----KNGKVIAWGS  246 (273)
T ss_dssp             GGGSSSEEEEEECSS--EEEEE----ETTEEEEEECCTTSTTCCCGGGGSSCCEEEECSSC-EEEE----ETTEEEEEST
T ss_pred             ccccCCccceeccce--eeEEE----ecCcEEEcCCCCCCccCCCccCCCCcEEEEeCcce-EEEE----ECCEEEEECC
Confidence            234456777765433  23332    378888885433 2221111222345555544332 2332    3788999954


Q ss_pred             C
Q 014934          409 P  409 (415)
Q Consensus       409 ~  409 (415)
                      .
T Consensus       247 ~  247 (273)
T d1jtdb_         247 S  247 (273)
T ss_dssp             T
T ss_pred             C
Confidence            3


No 103
>d1zgka1 b.68.11.1 (A:322-609) Kelch-like ECH-associated protein 1, KEAP1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=86.16  E-value=7.9  Score=31.89  Aligned_cols=176  Identities=16%  Similarity=0.149  Sum_probs=83.6

Q ss_pred             CeEEEEECCCCCeEEeEecCC-CCCeEEEEEcCCCCeEEEEECCCc-----EEEEECCCCeeeEEec--CCCccEEEEEe
Q 014934          187 NCVYLWNACSSKVTKLCDLGI-DDSVCSVGWANRNTHLAVGTSHGK-----VQIWDASRCKRVRTME--GHRLRVGALAW  258 (415)
Q Consensus       187 ~~V~iwd~~~~~~~~~~~~~~-~~~V~~v~~sp~g~~la~g~~dg~-----V~iwd~~~~~~~~~l~--~h~~~V~~l~~  258 (415)
                      ..+.+||..+.....+-.+.. ...-.++.+  +++.++.|+.++.     +..+|..+......-.  ........+..
T Consensus        70 ~~~~~yd~~~~~w~~~~~~p~~r~~~~~~~~--~~~i~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~  147 (288)
T d1zgka1          70 SALDCYNPMTNQWSPCAPMSVPRNRIGVGVI--DGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVL  147 (288)
T ss_dssp             CCEEEEETTTTEEEECCCCSSCCBTCEEEEE--TTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEE
T ss_pred             chhhhcccccccccccccccceecceecccc--ceeeEEecceecccccceeeeeccccCccccccccccccccceeeee
Confidence            358889988877665543322 111222222  5666666654443     4556766654322111  11122223333


Q ss_pred             eCCEEEEEeCC-----CcEEEEECCCCCccEEEeccc--cCCeEEEEEeCCCCEEEEEeCC-----CcEEEEECCCCcee
Q 014934          259 SSSLLSSGSRD-----KSILQRDIRAQEDFVSKLSGH--KSEVCGLKWSYDNRELASGGND-----NRLFVWNQHSTQPV  326 (415)
Q Consensus       259 ~~~~l~sgs~d-----g~I~iwd~~~~~~~~~~~~~h--~~~V~~l~~spdg~~lasg~~d-----g~I~iwd~~~~~~~  326 (415)
                      ...+++.|+.+     ..+..||.....  .......  .....+.... ++.+++.|+.+     ..+.++|..+.+..
T Consensus       148 ~~~~~~~GG~~~~~~~~~~~~~d~~~~~--~~~~~~~~~~~~~~~~~~~-~~~i~i~GG~~~~~~~~~~~~~~~~~~~~~  224 (288)
T d1zgka1         148 NRLLYAVGGFDGTNRLNSAECYYPERNE--WRMITAMNTIRSGAGVCVL-HNCIYAAGGYDGQDQLNSVERYDVETETWT  224 (288)
T ss_dssp             TTEEEEECCBCSSCBCCCEEEEETTTTE--EEECCCCSSCCBSCEEEEE-TTEEEEECCBCSSSBCCCEEEEETTTTEEE
T ss_pred             eecceEecCcccccccceEEEeeccccc--cccccccccccccccccce-eeeEEEecCccccccccceeeeeecceeee
Confidence            45556666543     347888877654  2222211  1111222222 45566666544     35678887765433


Q ss_pred             EEeccCCCcE-EEEEEcCCCCcEEEEEcCCC---CCeEEEEECCCCc
Q 014934          327 LKYCEHTAAV-KAIAWSPHLHGLLASGGGTA---DRCIRFWNTTTNT  369 (415)
Q Consensus       327 ~~~~~h~~~V-~~l~~sp~~~~llasggg~~---d~~I~iwd~~t~~  369 (415)
                      ..-....... .+++.. ++ .+++.||...   -..|.+||+.+.+
T Consensus       225 ~~~~~p~~r~~~~~~~~-~~-~l~v~GG~~~~~~~~~v~~yd~~~~~  269 (288)
T d1zgka1         225 FVAPMKHRRSALGITVH-QG-RIYVLGGYDGHTFLDSVECYDPDTDT  269 (288)
T ss_dssp             ECCCCSSCCBSCEEEEE-TT-EEEEECCBCSSCBCCEEEEEETTTTE
T ss_pred             cccCccCcccceEEEEE-CC-EEEEEecCCCCeecceEEEEECCCCE
Confidence            2211111111 122222 34 4777775211   1347889988764


No 104
>d1crua_ b.68.2.1 (A:) Soluble quinoprotein glucose dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}
Probab=83.97  E-value=15  Score=33.19  Aligned_cols=52  Identities=10%  Similarity=0.093  Sum_probs=37.2

Q ss_pred             CCeEEEEEcCCCCeEEEEECCCcEEEEECCCCeee--EEec------CCCccEEEEEeeC
Q 014934          209 DSVCSVGWANRNTHLAVGTSHGKVQIWDASRCKRV--RTME------GHRLRVGALAWSS  260 (415)
Q Consensus       209 ~~V~~v~~sp~g~~la~g~~dg~V~iwd~~~~~~~--~~l~------~h~~~V~~l~~~~  260 (415)
                      +..++|+|.|+|++|++--..|.|++++..+++..  ..+.      .-......|++++
T Consensus        27 ~~P~~la~~pdg~llVter~~G~i~~v~~~~g~~~~i~~~~~~~~~~~ge~GLLgia~~P   86 (450)
T d1crua_          27 NKPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHP   86 (450)
T ss_dssp             SSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECT
T ss_pred             CCceEEEEeCCCeEEEEEecCCEEEEEECCCCcEeecccCCccccccCCCCceeeEEeCC
Confidence            57889999999998876545799999988776433  2222      1235678899885


No 105
>d1jtdb_ b.69.5.2 (B:) beta-lactamase inhibitor protein-II, BLIP-II {Streptomyces exfoliatus [TaxId: 1905]}
Probab=81.86  E-value=13  Score=30.84  Aligned_cols=184  Identities=15%  Similarity=0.102  Sum_probs=90.0

Q ss_pred             CCCeEEEEEcCCCCeEEEEECCCcEEEEECCCCeeeEEecCCCccEEEEEeeCCEEEEEeCCCcEEEEECCCCCccEEEe
Q 014934          208 DDSVCSVGWANRNTHLAVGTSHGKVQIWDASRCKRVRTMEGHRLRVGALAWSSSLLSSGSRDKSILQRDIRAQEDFVSKL  287 (415)
Q Consensus       208 ~~~V~~v~~sp~g~~la~g~~dg~V~iwd~~~~~~~~~l~~h~~~V~~l~~~~~~l~sgs~dg~I~iwd~~~~~~~~~~~  287 (415)
                      ...|..|+--  ..+.++-. ||.|..|-......+..-......|..|+.-....+.- .|+.++.|.......... .
T Consensus        25 ~~~i~~va~G--~~h~~al~-dG~v~~wG~N~~GQlG~~~~~~~~v~~v~~G~~~~~al-~dg~v~~wG~~~~gq~~~-~   99 (273)
T d1jtdb_          25 QSGVDAIAGG--YFHGLALK-GGKVLGWGANLNGQLTMPAATQSGVDAIAAGNYHSLAL-KDGEVIAWGGNEDGQTTV-P   99 (273)
T ss_dssp             SSSEEEEEEC--SSEEEEEE-TTEEEEEECCTTSTTSCCGGGGSCCCEEEECSSEEEEE-ETTEEEEEECCTTSTTCC-C
T ss_pred             CCCcEEEEcc--CCEEEEEE-CCEEEEEeCCCCCceeeeecccccceEEecCCCceeee-eeeeeeccCCCcceeecc-c
Confidence            4567777652  23333334 89999997654433322222233455555433333332 489999998654332111 1


Q ss_pred             ccccCCeEEEEEeCCCCEEEEEeCCCcEEEEECCCCceeEEeccCCCcEEEEEEcCCCCcEEEEEcCCCCCeEEEEECCC
Q 014934          288 SGHKSEVCGLKWSYDNRELASGGNDNRLFVWNQHSTQPVLKYCEHTAAVKAIAWSPHLHGLLASGGGTADRCIRFWNTTT  367 (415)
Q Consensus       288 ~~h~~~V~~l~~spdg~~lasg~~dg~I~iwd~~~~~~~~~~~~h~~~V~~l~~sp~~~~llasggg~~d~~I~iwd~~t  367 (415)
                      ......+..++....  ..+. -.|+.+..|.................|..++-..  ...++.    .++.+..|....
T Consensus       100 ~~~~~~~~~i~~~~~--~~~~-~~dg~v~~~g~~~~~~~~~~~~~~~~v~~~~~~~--~~~~~~----~~g~~~~~G~~~  170 (273)
T d1jtdb_         100 AEARSGVDAIAAGAW--ASYA-LKDGKVIAWGDDSDGQTTVPAEAQSGVTALDGGV--YTALAV----KNGGVIAWGDNY  170 (273)
T ss_dssp             GGGGSSCCEEEEETT--EEEE-EETTEEEEEECCTTSTTSCCGGGGSSEEEEEECS--SEEEEE----ETTEEEEEECCT
T ss_pred             cccccceeEEeeecc--cccc-cccccceecccCCCCceeeeccCCceEEEEeccc--eeeeee----cccceeEeeccc
Confidence            112233444443322  2222 2478899997544322211112234455554432  223332    367888887643


Q ss_pred             -CcEEEEeeCCCCEEEEEECCCCCeEEEEEecCCCcEEEEECCC
Q 014934          368 -NTHLSCMDTGSQVCNLVWSKNVNELVSTHGYSQNQIIVWRYPT  410 (415)
Q Consensus       368 -~~~~~~~~~~~~V~~l~~s~~~~~l~s~~g~~dg~I~vw~~~s  410 (415)
                       ++..........|..++..... .++.    .||.|+.|-...
T Consensus       171 ~g~~~~~~~~~~~v~~Is~G~~h-~~~l----~dG~v~~WG~n~  209 (273)
T d1jtdb_         171 FGQTTVPAEAQSGVDDVAGGIFH-SLAL----KDGKVIAWGDNR  209 (273)
T ss_dssp             TSTTSCCGGGSSSEEEEEECSSE-EEEE----ETTEEEEEECCT
T ss_pred             CCcccccccccCCccceecccee-eEEE----ecCcEEEcCCCC
Confidence             2222222234567776654332 2222    268888886543


No 106
>d1crua_ b.68.2.1 (A:) Soluble quinoprotein glucose dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}
Probab=78.63  E-value=23  Score=31.85  Aligned_cols=107  Identities=18%  Similarity=0.201  Sum_probs=63.4

Q ss_pred             cCCeEEEEEeCCCCEEEEEeCCCcEEEEECCCCcee--EEec------cCCCcEEEEEEcCC---CCcEEEEEcC----C
Q 014934          291 KSEVCGLKWSYDNRELASGGNDNRLFVWNQHSTQPV--LKYC------EHTAAVKAIAWSPH---LHGLLASGGG----T  355 (415)
Q Consensus       291 ~~~V~~l~~spdg~~lasg~~dg~I~iwd~~~~~~~--~~~~------~h~~~V~~l~~sp~---~~~llasggg----~  355 (415)
                      -...++|+|.|||++|++--..|+|++++..+++..  ..+.      .-+.....|+++|+   ..+++++...    .
T Consensus        26 L~~P~~la~~pdg~llVter~~G~i~~v~~~~g~~~~i~~~~~~~~~~~ge~GLLgia~~Pdf~~n~~iYvsyt~~~~~~  105 (450)
T d1crua_          26 LNKPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPKS  105 (450)
T ss_dssp             CSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTTC
T ss_pred             CCCceEEEEeCCCeEEEEEecCCEEEEEECCCCcEeecccCCccccccCCCCceeeEEeCCCCccCCEEEEEEecCCCCC
Confidence            456789999999999888766799999998776542  2221      12356789999995   3345554210    0


Q ss_pred             CC----C--eEEEEECCCCc-E-------EEEee--CCCCEEEEEECCCCCeEEEEEec
Q 014934          356 AD----R--CIRFWNTTTNT-H-------LSCMD--TGSQVCNLVWSKNVNELVSTHGY  398 (415)
Q Consensus       356 ~d----~--~I~iwd~~t~~-~-------~~~~~--~~~~V~~l~~s~~~~~l~s~~g~  398 (415)
                      .+    .  .+..+...... .       +..+.  .......|.|.+||...++. |.
T Consensus       106 ~~~~~~~~~~v~~~~~~~~~~~~~~~~~i~~~~p~~~~H~gg~l~fgpDG~LYvs~-Gd  163 (450)
T d1crua_         106 TDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTI-GD  163 (450)
T ss_dssp             --CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEE-CC
T ss_pred             cccccccceEEEeeecccccccccceEEEeecccccccccccceeEcCCCCEEEEe-cC
Confidence            01    1  13333332221 1       11111  22457789999999866654 53


No 107
>d1qfma1 b.69.7.1 (A:1-430) Prolyl oligopeptidase, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}
Probab=78.43  E-value=22  Score=31.53  Aligned_cols=183  Identities=8%  Similarity=0.031  Sum_probs=104.8

Q ss_pred             eEEEEECCCCCe--EEeEec-CCCCCeEEEEEcCCCCeEEEEEC---CCcEEEE--ECCCCe--------eeEEecCCCc
Q 014934          188 CVYLWNACSSKV--TKLCDL-GIDDSVCSVGWANRNTHLAVGTS---HGKVQIW--DASRCK--------RVRTMEGHRL  251 (415)
Q Consensus       188 ~V~iwd~~~~~~--~~~~~~-~~~~~V~~v~~sp~g~~la~g~~---dg~V~iw--d~~~~~--------~~~~l~~h~~  251 (415)
                      .|+.+.+.+...  ..++.. .....+..+..+.++++++....   ++...+|  |+....        ....+.....
T Consensus       209 ~v~~h~lgt~~~~d~~v~~e~d~~~~~~~~~~s~d~~~l~i~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~  288 (430)
T d1qfma1         209 KLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLIDNFEG  288 (430)
T ss_dssp             EEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEECSSSS
T ss_pred             eEEEEECCCCccccccccccccCCceEEeeeccCCcceeeEEeeccCCccEEEEEeeCCCcccccccccceeEeeccccc
Confidence            588888877643  233331 12345777888999998876433   3334444  443211        1222333334


Q ss_pred             cEEEEEeeCCEEEEEe----CCCcEEEEECCCCCcc--EEEeccccCCeEEEEEeCCCCEEEEEe-CCC--cEEEEECCC
Q 014934          252 RVGALAWSSSLLSSGS----RDKSILQRDIRAQEDF--VSKLSGHKSEVCGLKWSYDNRELASGG-NDN--RLFVWNQHS  322 (415)
Q Consensus       252 ~V~~l~~~~~~l~sgs----~dg~I~iwd~~~~~~~--~~~~~~h~~~V~~l~~spdg~~lasg~-~dg--~I~iwd~~~  322 (415)
                      .+.-+...+..+..-+    .++.|...++......  ...+..+...+..-.+...+.+|+... .++  .|.++++.+
T Consensus       289 ~~~~~~~~~~~~~~~Tn~~a~~~~L~~~~~~~~~~~~w~~vi~~~~~~~~~~~~~~~~~~lvl~~~~~~~~~l~v~~~~~  368 (430)
T d1qfma1         289 EYDYVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSNFLVLCYLHDVKNTLQLHDLAT  368 (430)
T ss_dssp             CEEEEEEETTEEEEEECTTCTTCEEEEEETTBCCGGGCEEEECCCSSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTT
T ss_pred             ceEEEecCCceeecccCcccccceeEEecCCCCccccceEEecccCcceeeeEEEEECCEEEEEEEcCCEeEEEEEECCC
Confidence            4444444555444433    2466777787765421  223344555565545555566666554 443  589999988


Q ss_pred             CceeEEeccCCCcEEEEEEcCCCCcEEEEE-cCCCCCeEEEEECCCCcE
Q 014934          323 TQPVLKYCEHTAAVKAIAWSPHLHGLLASG-GGTADRCIRFWNTTTNTH  370 (415)
Q Consensus       323 ~~~~~~~~~h~~~V~~l~~sp~~~~llasg-gg~~d~~I~iwd~~t~~~  370 (415)
                      +.....+....+.|..+...++...+..+- +-..-.++.-+|+.+++.
T Consensus       369 ~~~~~~~~~~~~sv~~~~~~~~~~~~~~~~ss~~tP~~~y~~Dl~t~~~  417 (430)
T d1qfma1         369 GALLKIFPLEVGSVVGYSGQKKDTEIFYQFTSFLSPGIIYHCDLTKEEL  417 (430)
T ss_dssp             CCEEEEECCCSSEEEEEECCTTCSEEEEEEECSSCCCEEEEEETTSSSC
T ss_pred             CcEEEecCCCCceEeeccCCCCCCEEEEEEcCCCCCCeEEEEECCCCCc
Confidence            876655555556676666666665555443 333568899999998853


No 108
>d1wp5a_ b.68.10.1 (A:) Topoisomerase IV subunit A, ParC, C-terminal domain {Bacillus stearothermophilus [TaxId: 1422]}
Probab=66.28  E-value=37  Score=28.87  Aligned_cols=154  Identities=10%  Similarity=0.008  Sum_probs=89.0

Q ss_pred             CCcceeEeecCC-CcEEEEEcCCeEEEEEC---CCC------Ce-EEeEecCCCCCeEEEEEcC---CCCeEEEEECCCc
Q 014934          166 DDFYLNLVDWSS-HNVLAVGLGNCVYLWNA---CSS------KV-TKLCDLGIDDSVCSVGWAN---RNTHLAVGTSHGK  231 (415)
Q Consensus       166 ~~~~i~~l~ws~-~~~la~~~d~~V~iwd~---~~~------~~-~~~~~~~~~~~V~~v~~sp---~g~~la~g~~dg~  231 (415)
                      +|+....+.-+. +.+|.....|.+|...+   ..+      .. ..++.+.....+..+....   ...+|+..+..|.
T Consensus        38 ~D~v~~~~~~~t~d~ll~fT~~Grvy~l~v~eiP~~~~~s~G~pi~~ll~l~~~e~ii~~~~~~~~~~~~~l~~~Tk~G~  117 (323)
T d1wp5a_          38 TDRLLAMLEMNTKDVLLLFTNKGNYLYCPVHELPDIRWKDLGQHIANIIPIDRDEEIIKAIPINDFELNGYFLFVTRNGM  117 (323)
T ss_dssp             TCCEEEEEEEETTSEEEEEETTSEEEEEEGGGSCBCCTTSCCEEGGGTSCCCTTCCEEEEEEESCTTSSCEEEEEETTSE
T ss_pred             CceEEEEEEEcCCCEEEEEecCCEEEEEeeccCcccccccccccceeeecccCCcceEEEeeccccccceeEEEEeehhh
Confidence            455555554444 77888888888776654   221      11 1222233445555444332   3678888999999


Q ss_pred             EEEEECCCCe------ee--EEecCCCccEEEEEee--CCEEEEEeCCCcEEEEECCCCCc------cEEEec-cccCCe
Q 014934          232 VQIWDASRCK------RV--RTMEGHRLRVGALAWS--SSLLSSGSRDKSILQRDIRAQED------FVSKLS-GHKSEV  294 (415)
Q Consensus       232 V~iwd~~~~~------~~--~~l~~h~~~V~~l~~~--~~~l~sgs~dg~I~iwd~~~~~~------~~~~~~-~h~~~V  294 (415)
                      ++..++....      .+  ..+. -...+..+...  .+.++.++..|.+..++...-..      -+.-+. .....|
T Consensus       118 iKr~~l~~f~~~~~~~g~~~i~L~-~~D~l~~v~~~~~~~~i~l~t~~G~~lrf~~~~vr~~gr~a~GV~~ikL~~~D~v  196 (323)
T d1wp5a_         118 VKKTELKHYKAQRYSKPLTGINLK-NDDQVVDVHLTDGMNELFLVTHNGYALWFDESEVSIVGVRAAGVKGMNLKEGDYI  196 (323)
T ss_dssp             EEEEEGGGGCCSCCSSCEECSCCC-TTCCEEEEEEECSCSEEEEEETTSEEEEEEGGGSCBCCSSCCCEECCCCCTTCCE
T ss_pred             eeeccHHHhhhhhccchhhhcccc-ccccccceeccCCCeEEEEEEecceeeEeecccccccCccccccccccccccccc
Confidence            9999874321      11  2233 23344444443  57888999999999998753210      011111 122334


Q ss_pred             EE-EEEeCCCCEEEEEeCCCcEEEEEC
Q 014934          295 CG-LKWSYDNRELASGGNDNRLFVWNQ  320 (415)
Q Consensus       295 ~~-l~~spdg~~lasg~~dg~I~iwd~  320 (415)
                      -+ ....+++..|++.+..|..+.-.+
T Consensus       197 v~~~~~~~~~~~ll~~T~~G~gKr~~~  223 (323)
T d1wp5a_         197 VSGQLITSKDESIVVATQRGAVKKMKL  223 (323)
T ss_dssp             EEEEEECCTTCEEEEEETTSEEEEEEG
T ss_pred             chhhhccccccceeeeeeeheeecccc
Confidence            43 344566778888888888777654


No 109
>d1tl2a_ b.67.1.1 (A:) Tachylectin-2 {Japanese horseshoe crab (Tachypleus tridentatus) [TaxId: 6853]}
Probab=57.09  E-value=42  Score=26.48  Aligned_cols=138  Identities=12%  Similarity=0.011  Sum_probs=74.1

Q ss_pred             CCCeEEEEEcCCCCeEEEEECCCcEEEEECCCCeeeEEecCCCccEEEEEe--------eC-CEEEEEeCCCcEEEEECC
Q 014934          208 DDSVCSVGWANRNTHLAVGTSHGKVQIWDASRCKRVRTMEGHRLRVGALAW--------SS-SLLSSGSRDKSILQRDIR  278 (415)
Q Consensus       208 ~~~V~~v~~sp~g~~la~g~~dg~V~iwd~~~~~~~~~l~~h~~~V~~l~~--------~~-~~l~sgs~dg~I~iwd~~  278 (415)
                      =+.+.-|.|+|+|.+.|+-.  |.+..=.+.+..-..-+ ....+|.+-.|        +| .+|.+.+ ++.++--...
T Consensus        39 ~~n~~~i~fsP~G~LyaVr~--~~lY~Gp~~s~~nq~wf-~~atrIG~ggWn~FkflffdP~G~LyaVt-~~~LYr~~pP  114 (235)
T d1tl2a_          39 WSNFKFLFLSPGGELYGVLN--DKIYKGTPPTHDNDNWM-GRAKKIGNGGWNQFQFLFFDPNGYLYAVS-KDKLYKASPP  114 (235)
T ss_dssp             CTTCSEEEECTTSCEEEEET--TEEEEESCCCSTTCCHH-HHCEEEECSCGGGCSEEEECTTSCEEEEE-TTEEEEESCC
T ss_pred             ccceeEEEECCCCcEEEEEC--CeEEECCCCCcchHHHH-HhhhhcccCcccceEEEEECCCceEEEec-CcceecCCcC
Confidence            35678899999999888743  33433333222111101 12234444444        44 3555555 4655443332


Q ss_pred             CCCc------cEEEeccccCCeEEEEEeCCCCEEEEEeCCCcEEEEECCCCc------eeEEe-ccCCCcEEEEEEcCCC
Q 014934          279 AQED------FVSKLSGHKSEVCGLKWSYDNRELASGGNDNRLFVWNQHSTQ------PVLKY-CEHTAAVKAIAWSPHL  345 (415)
Q Consensus       279 ~~~~------~~~~~~~h~~~V~~l~~spdg~~lasg~~dg~I~iwd~~~~~------~~~~~-~~h~~~V~~l~~sp~~  345 (415)
                      +.+.      .-..=...-..+..|-|.|+|.+-++ .+| .++-+....+.      .-..+ .++-....-+.|+|+|
T Consensus       115 tn~~q~W~g~a~~vG~~gw~df~~lFFdP~G~LYaV-~~~-~l~k~~pP~~~~d~WL~~st~igr~~w~~~~fi~Fs~dG  192 (235)
T d1tl2a_         115 QSDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAV-HGQ-QFYKALPPVSNQDNWLARATKIGQGGWDTFKFLFFSSVG  192 (235)
T ss_dssp             CSTTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEE-ETT-EEEEECCCSSTTCCHHHHCEEEESSSGGGEEEEEECTTS
T ss_pred             cccchhhhhhhhhhccCCcCceeEEEECCCceEEEE-ECC-cEEEcCCCCCCCchhhhhhhhhccCcccCceEEEECCCC
Confidence            2220      01111122345778999999988888 334 47777644321      11223 3566667889999998


Q ss_pred             CcEEEEE
Q 014934          346 HGLLASG  352 (415)
Q Consensus       346 ~~llasg  352 (415)
                      . |.+..
T Consensus       193 ~-L~~v~  198 (235)
T d1tl2a_         193 T-LFGVQ  198 (235)
T ss_dssp             C-EEEEE
T ss_pred             c-EEEEe
Confidence            7 66554


No 110
>d1a12a_ b.69.5.1 (A:) Regulator of chromosome condensation RCC1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=43.90  E-value=89  Score=26.37  Aligned_cols=228  Identities=11%  Similarity=0.084  Sum_probs=117.9

Q ss_pred             eeEeecCCCcEEEEEcCCeEEEEECCC-CCe----------EEeEecCCCCCeEEEEEcCCCCeEEEEECCCcEEEEECC
Q 014934          170 LNLVDWSSHNVLAVGLGNCVYLWNACS-SKV----------TKLCDLGIDDSVCSVGWANRNTHLAVGTSHGKVQIWDAS  238 (415)
Q Consensus       170 i~~l~ws~~~~la~~~d~~V~iwd~~~-~~~----------~~~~~~~~~~~V~~v~~sp~g~~la~g~~dg~V~iwd~~  238 (415)
                      |..|+-.....+|...++.|+.|=... +++          ...........|..|+.  ...+.+.-..+|.|..|-..
T Consensus        49 i~~ia~G~~h~~al~~~G~vy~wG~n~~GQLG~g~~~~~~~~~~~~~~~~~~i~~i~~--g~~~~~~~~~~g~v~~wG~~  126 (401)
T d1a12a_          49 VVQAEAGGMHTVCLSKSGQVYSFGCNDEGALGRDTSVEGSEMVPGKVELQEKVVQVSA--GDSHTAALTDDGRVFLWGSF  126 (401)
T ss_dssp             EEEEEECSSEEEEEETTSCEEEEECCTTSTTCSCCCSTTGGGSCEECCCCSCEEEEEE--CSSEEEEEETTSCEEEEECE
T ss_pred             eEEEEeCCCEEEEEeCCCEEEEEeCCCCCCCCcccccccccccccccccccceeeecc--cccceeeccccccceecccc
Confidence            556665556778888899999995432 211          00111122345555554  33456666889999999632


Q ss_pred             CC-------------eeeEEecCCCccEEEEEeeCCEEEEEeCCCcEEEEECCCCCcc----------------------
Q 014934          239 RC-------------KRVRTMEGHRLRVGALAWSSSLLSSGSRDKSILQRDIRAQEDF----------------------  283 (415)
Q Consensus       239 ~~-------------~~~~~l~~h~~~V~~l~~~~~~l~sgs~dg~I~iwd~~~~~~~----------------------  283 (415)
                      ..             ............|..++......+....++.++.|-.......                      
T Consensus       127 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~g~~~~~~~~~~g~~~~~G~n~~gqlg~~~~~~~~~~~~~~~~~~~~p  206 (401)
T d1a12a_         127 RDNNGVIGLLEPMKKSMVPVQVQLDVPVVKVASGNDHLVMLTADGDLYTLGCGEQGQLGRVPELFANRGGRQGLERLLVP  206 (401)
T ss_dssp             EETTEEEESSBBTBCEEEEEEECCSSCEEEEEECSSEEEEEETTSCEEEEECCTTSTTCSCGGGTSSSCGGGGHHHHHSC
T ss_pred             ccccccccccCCccccceeeeeccCCceeEEEecccceeeeecCCcccccccCCccccCCCCccccccCCcccccccccc
Confidence            11             1111222344567777776677777788999999975432210                      


Q ss_pred             EEEe-----ccccCCeEEEEEeCCCCEEEEEeCCCcEEEEECCCC----------ceeEEe----ccCCCcEEEEEEcCC
Q 014934          284 VSKL-----SGHKSEVCGLKWSYDNRELASGGNDNRLFVWNQHST----------QPVLKY----CEHTAAVKAIAWSPH  344 (415)
Q Consensus       284 ~~~~-----~~h~~~V~~l~~spdg~~lasg~~dg~I~iwd~~~~----------~~~~~~----~~h~~~V~~l~~sp~  344 (415)
                      ....     ......|..++..  ....+.-..++.++.|.....          ......    ......+..++-.  
T Consensus       207 ~~~~~~~~~~~~~~~i~~v~~g--~~~~~~l~~~g~v~~~g~n~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~i~~g--  282 (401)
T d1a12a_         207 KCVMLKSRGSRGHVRFQDAFCG--AYFTFAISHEGHVYGFGLSNYHQLGTPGTESCFIPQNLTSFKNSTKSWVGFSGG--  282 (401)
T ss_dssp             EECCCBCSSCCSBCCEEEEEEE--TTEEEEEETTCCEEEEECCTTSTTSCSSCSCEEEEEECGGGCCTTCCEEEEEEC--
T ss_pred             ceeeccccCCCCCceEEEEEec--CCeEEEEecCCeEeeecccceecccccccccceeccccccccccceeEEEEeee--
Confidence            0000     0011234444432  334455567888888875421          011111    1112234444332  


Q ss_pred             CCcEEEEEcCCCCCeEEEEECCCC-----------cE-EEEeeCCCCEEEEEECCCCCeEEEEEecCCCcEEEEECCC
Q 014934          345 LHGLLASGGGTADRCIRFWNTTTN-----------TH-LSCMDTGSQVCNLVWSKNVNELVSTHGYSQNQIIVWRYPT  410 (415)
Q Consensus       345 ~~~llasggg~~d~~I~iwd~~t~-----------~~-~~~~~~~~~V~~l~~s~~~~~l~s~~g~~dg~I~vw~~~s  410 (415)
                      ....++..   .++.|..|.-...           .. ...+.....|..++...... ++.   ..||.|+.|=...
T Consensus       283 ~~~~~~l~---~~g~v~~wG~n~~gqlG~g~~~~~~~~P~~i~~~~~i~~Is~G~~hs-~al---t~dG~v~~WG~n~  353 (401)
T d1a12a_         283 QHHTVCMD---SEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISRLPAVSSVACGASVG-YAV---TKDGRVFAWGMGT  353 (401)
T ss_dssp             SSEEEEEE---TTSCEEEEECCGGGTTCSCTTCCCEEEEEECCSSSSEEEEEECSSEE-EEE---ETTSCEEEEECCT
T ss_pred             ccceeeec---cCCCEEEecccccCccCCCcccccccCCEEcCCCCCeEEEEeeCCEE-EEE---eCCCeEEEEecCC
Confidence            22233333   5888888864321           11 12233345677776644332 333   3688899996544


No 111
>d1c8ua2 d.38.1.3 (A:116-286) Thioesterase II (TesB) {Escherichia coli [TaxId: 562]}
Probab=36.46  E-value=15  Score=28.16  Aligned_cols=59  Identities=5%  Similarity=0.056  Sum_probs=37.4

Q ss_pred             CcEEEEEcCCeEEEEECCC-CCeEE-eEec----CCCCCeEEEEEcCCCCeEEEEECCCcEEEEE
Q 014934          178 HNVLAVGLGNCVYLWNACS-SKVTK-LCDL----GIDDSVCSVGWANRNTHLAVGTSHGKVQIWD  236 (415)
Q Consensus       178 ~~~la~~~d~~V~iwd~~~-~~~~~-~~~~----~~~~~V~~v~~sp~g~~la~g~~dg~V~iwd  236 (415)
                      ..+.+++.|..|.+.+.-. .+... ....    +..+-+.+--|+.+|.++|++...|.|++.|
T Consensus       107 ~~~~~aSLDH~~wFH~~~~~~~WlL~~~~s~~a~~gRgl~~g~i~~~dG~LvAs~~QEgl~R~~~  171 (171)
T d1c8ua2         107 PGIQIATIDHSMWFHRPFNLNEWLLYSVESTSASSARGFVRGEFYTQDGVLVASTVQEGVMRNHN  171 (171)
T ss_dssp             TTEEEEEEEEEEEECSCCCTTSCEEEEEEEEEEETTEEEEEEEEEETTCCEEEEEEEEEEEEECC
T ss_pred             CceeeEeeeeEEEEecCcccceeEEEEEECccccCCeeEEEEEEECCCCCEEEEEEEEEEEEecC
Confidence            4566777788877775322 22111 1110    2245566777899999999999999888753


No 112
>d2nt0a1 b.71.1.2 (A:1-77,A:432-497) Glucosylceramidase {Human (Homo sapiens) [TaxId: 9606]}
Probab=21.98  E-value=1.4e+02  Score=21.74  Aligned_cols=52  Identities=12%  Similarity=0.126  Sum_probs=34.6

Q ss_pred             CCCCCeEEEEE-cCCCCeEEEEECCC----cEEEEECCCCeeeEEecCCCccEEEEEee
Q 014934          206 GIDDSVCSVGW-ANRNTHLAVGTSHG----KVQIWDASRCKRVRTMEGHRLRVGALAWS  259 (415)
Q Consensus       206 ~~~~~V~~v~~-sp~g~~la~g~~dg----~V~iwd~~~~~~~~~l~~h~~~V~~l~~~  259 (415)
                      .....+..++| .|||..+++...++    .+.|++...+..-..+.+|  .|..+.|.
T Consensus        85 s~~~~L~~vAF~nPDgs~vlVv~N~s~~~~~~~i~~~~~~~~~~~lpa~--Si~T~vw~  141 (143)
T d2nt0a1          85 SQKNDLDAVALMHPDGSAVVVVLNRSSKDVPLTIKDPAVGFLETISPGY--SIHTYLWH  141 (143)
T ss_dssp             SSCCSEEEEEEECTTSCEEEEEEECSSSCEEEEEEETTTEEEEEEECTT--EEEEEEEC
T ss_pred             cCcCcceEEEEECCCCCEEEEEEeCCCCCeEEEEEeCCCCEEEEEeCCC--EEEEEEEe
Confidence            44677999999 78999877765433    4677776665555555543  46666664


Done!