BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 014936
(415 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3PDX|A Chain A, Crystal Structural Of Mouse Tyrosine Aminotransferase
Length = 402
Score = 280 bits (716), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 149/375 (39%), Positives = 214/375 (57%), Gaps = 5/375 (1%)
Query: 35 KKVISLAMGDPTVHSCFXXXXXXXXXXXXXXXSEKFNGYAPTAGLPLTRRAIAEYL-SRD 93
K VISL++GDPTV S K+NGYAP+ G +R +A Y +
Sbjct: 31 KTVISLSIGDPTVFGNLPTDPEVTQAMKDALDSGKYNGYAPSIGYLSSREEVASYYHCPE 90
Query: 94 LPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDL 153
P L DV +TSGC+QAI++ +A+L+ PG NIL+PRPGF +Y A IEV+ ++L
Sbjct: 91 AP--LEAKDVILTSGCSQAIELCLAVLANPGQNILIPRPGFSLYRTLAESMGIEVKLYNL 148
Query: 154 LPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADE 213
LP+K WE+DL +ESL D+ T LV+ NP NPCG+V+S +HLQK+ A + ++ADE
Sbjct: 149 LPEKSWEIDLKQLESLIDEKTACLVVNNPSNPCGSVFSKRHLQKILAVAERQCVPILADE 208
Query: 214 VYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVE 273
+YG +VF D + PM + VPIL+ G L+ RW+VPGWRLGW + D +F
Sbjct: 209 IYGDMVFSDCKYEPMATLSTNVPILSCGGLAXRWLVPGWRLGWILIHDRRDIFGNEIRDG 268
Query: 274 RMKKYFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPH 333
+K ILG P T +Q A+ SILQ+ + F++ TL+ LK + D+CY + IP + P
Sbjct: 269 LVKLSQRILG-PCTIVQGALKSILQRTPQEFYQDTLSFLKSNADLCYGALSAIPGLQ-PV 326
Query: 334 KPEGSMAVMLKLNLSLLXXXXXXXXFCFKLAKEESVIILPGTAVGLKNWLRVTFAVDPYS 393
+P G+M +M+ + + F +L E+SV LP T N+ RV V
Sbjct: 327 RPSGAMYLMVGIEMEHFPEFENDVEFTERLIAEQSVHCLPATCFEYPNFFRVVITVPEVM 386
Query: 394 LEECLDRIKSFYQRH 408
+ E RI+ F ++H
Sbjct: 387 MLEACSRIQEFCEQH 401
>pdb|3DYD|A Chain A, Human Tyrosine Aminotransferase
pdb|3DYD|B Chain B, Human Tyrosine Aminotransferase
Length = 427
Score = 274 bits (700), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 147/375 (39%), Positives = 213/375 (56%), Gaps = 5/375 (1%)
Query: 35 KKVISLAMGDPTVHSCFXXXXXXXXXXXXXXXSEKFNGYAPTAGLPLTRRAIAEYL-SRD 93
K +ISL++GDPTV S K+NGYAP+ G +R IA Y +
Sbjct: 54 KTMISLSIGDPTVFGNLPTDPEVTQAMKDALDSGKYNGYAPSIGFLSSREEIASYYHCPE 113
Query: 94 LPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDL 153
P L DV +TSGC+QAID+ +A+L+ PG NIL+PRPGF +Y+ A IEV+ ++L
Sbjct: 114 AP--LEAKDVILTSGCSQAIDLCLAVLANPGQNILVPRPGFSLYKTLAESMGIEVKLYNL 171
Query: 154 LPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADE 213
LP+K WE+DL +E L D+ T L++ NP NPCG+V+S +HLQK+ A + ++ADE
Sbjct: 172 LPEKSWEIDLKQLEYLIDEKTACLIVNNPSNPCGSVFSKRHLQKILAVAARQCVPILADE 231
Query: 214 VYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVE 273
+YG +VF D + P+ + VPIL+ G L+KRW+VPGWRLGW + D +F
Sbjct: 232 IYGDMVFSDCKYEPLATLSTDVPILSCGGLAKRWLVPGWRLGWILIHDRRDIFGNEIRDG 291
Query: 274 RMKKYFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPH 333
+K ILG P T +Q A+ SIL + F+ TL+ LK + D+CY + IP + P
Sbjct: 292 LVKLSQRILG-PCTIVQGALKSILCRTPGEFYHNTLSFLKSNADLCYGALAAIPGLR-PV 349
Query: 334 KPEGSMAVMLKLNLSLLXXXXXXXXFCFKLAKEESVIILPGTAVGLKNWLRVTFAVDPYS 393
+P G+M +M+ + + F +L E+SV LP T N++RV V
Sbjct: 350 RPSGAMYLMVGIEMEHFPEFENDVEFTERLVAEQSVHCLPATCFEYPNFIRVVITVPEVM 409
Query: 394 LEECLDRIKSFYQRH 408
+ E RI+ F ++H
Sbjct: 410 MLEACSRIQEFCEQH 424
>pdb|1BW0|A Chain A, Crystal Structure Of Tyrosine Aminotransferase From
Trypanosoma Cruzi
pdb|1BW0|B Chain B, Crystal Structure Of Tyrosine Aminotransferase From
Trypanosoma Cruzi
Length = 416
Score = 195 bits (495), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 123/386 (31%), Positives = 193/386 (50%), Gaps = 15/386 (3%)
Query: 35 KKVISLAMGDPTVHSCFXXXXXXXXXXXXXXXSEKFNGYAPTAGLPLTRRAIAEYLSRDL 94
K +I L++GDPT+ S++ NGY PT G P R A+A +
Sbjct: 33 KPIIKLSVGDPTLDKNLLTSAAQIKKLKEAIDSQECNGYFPTVGSPEAREAVATWWRNSF 92
Query: 95 PYK------LTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEV 148
+K + ++V + SG + I +A+ + G L+P+PGFP YE I +
Sbjct: 93 VHKEELKSTIVKDNVVLCSGGSHGILMAITAICDAGDYALVPQPGFPHYETVCKAYGIGM 152
Query: 149 RHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTL 208
++ P+ WE DLD+I L D T L++ NP NPCG+ +S +H++ + A +L+
Sbjct: 153 HFYNCRPENDWEADLDEIRRLKDDKTKLLIVTNPSNPCGSNFSRKHVEDIVRLAEELRLP 212
Query: 209 VIADEVYGHLVF-GDKP---FVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCG 264
+ +DE+Y +VF G P F + F +TVP + LG + +VPGWRLGW + DP G
Sbjct: 213 LFSDEIYAGMVFKGKDPNATFTSVADFETTVPRVILGGTAXNLVVPGWRLGWLLYVDPHG 272
Query: 265 MFRKPKVVERMKKYFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIK 324
P +E +K+ ++ P T +QAA+ L + + + +++S YN I
Sbjct: 273 --NGPSFLEGLKRVGMLVCGPCTVVQAALGEALLNTPQEHLDQIVAKIEESAMYLYNHIG 330
Query: 325 EIPCIS-CPHKPEGSMAVMLKLNLSLLXXXXXXXXFCFKLAKEESVIILPGTAVGLKNWL 383
E CI P P G+M +M +++L F KL +EE+V +LPGT +
Sbjct: 331 E--CIGLAPTMPRGAMYLMSRIDLEKYRDIKTDVEFFEKLLEEENVQVLPGTIFHAPGFT 388
Query: 384 RVTFAVDPYSLEECLDRIKSFYQRHA 409
R+T E ++RIK+F QRHA
Sbjct: 389 RLTTTRPVEVYREAVERIKAFCQRHA 414
>pdb|1XI9|A Chain A, Alanine Aminotransferase From Pyrococcus Furiosus
Pfu-1397077-001
pdb|1XI9|B Chain B, Alanine Aminotransferase From Pyrococcus Furiosus
Pfu-1397077-001
pdb|1XI9|C Chain C, Alanine Aminotransferase From Pyrococcus Furiosus
Pfu-1397077-001
pdb|1XI9|D Chain D, Alanine Aminotransferase From Pyrococcus Furiosus
Pfu-1397077-001
Length = 406
Score = 150 bits (379), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 113/410 (27%), Positives = 182/410 (44%), Gaps = 21/410 (5%)
Query: 12 GSIITIKGMLSL-------LMQSVDDEKNEKKVISLAMGDPTVHSCFXXXXXXXXXXXXX 64
GSI K LS+ ++ + + EK KVI L +GDP
Sbjct: 8 GSIRASKRALSVEYAIRDVVLPARELEKKGIKVIRLNIGDPVKFDF--QPPEHMKEAYCK 65
Query: 65 XXSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPG 124
E N Y + GLP R+AI E R +TP+DV VT+ T+A+ + L PG
Sbjct: 66 AIKEGHNYYGDSEGLPELRKAIVEREKRKNGVDITPDDVRVTAAVTEALQLIFGALLDPG 125
Query: 125 ANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGN 184
IL+P P +P Y F + + + ++ W+ D+DDI T A+ +INP N
Sbjct: 126 DEILVPGPSYPPYTGLVKFYGGKPVEYRTIEEEDWQPDIDDIRKKITDRTKAIAVINPNN 185
Query: 185 PCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLS 244
P G +Y + L+++ A + + VI+DE+Y + + + P G VP++ + LS
Sbjct: 186 PTGALYDKKTLEEILNIAGEYEIPVISDEIYDLMTYEGEHISP-GSLTKDVPVIVMNGLS 244
Query: 245 KRWIVPGWRLGWFVTTDPCGMFRKPK-VVERMKKYFDILGDPATFIQAAVPSILQQPDEV 303
K + GWRLG+ DP + + ++R+ + PA F AA+ + D
Sbjct: 245 KVYFATGWRLGYMYFVDPENKLSEVREAIDRLARIRLCPNTPAQF--AAIAGLTGPMD-- 300
Query: 304 FFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLXXXXXXXXFCFKL 363
+ K+ + LK+ D Y ++ EIP IS KP+G+ + K+ + F +
Sbjct: 301 YLKEYMKKLKERRDYIYKRLNEIPGIST-TKPQGAFYIFPKIEVG---PWKNDKEFVLDV 356
Query: 364 AKEESVIILPGTAVGL--KNWLRVTFAVDPYSLEECLDRIKSFYQRHAKQ 411
V+ + G+ G R F LEE +DR + F + K+
Sbjct: 357 LHNAHVLFVHGSGFGEYGAGHFRAVFLPPIEILEEAMDRFEKFMKERLKE 406
>pdb|1GDE|A Chain A, Crystal Structure Of Pyrococcus Protein A-1 E-form
pdb|1GDE|B Chain B, Crystal Structure Of Pyrococcus Protein A-1 E-form
pdb|1GD9|A Chain A, Crystall Structure Of Pyrococcus Protein-A1
pdb|1GD9|B Chain B, Crystall Structure Of Pyrococcus Protein-A1
Length = 389
Score = 111 bits (277), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 100/383 (26%), Positives = 178/383 (46%), Gaps = 43/383 (11%)
Query: 35 KKVISLAMGDPTVHSCFXXXXXXXXXXXXXXXSEKFNGYAPTAGLPLTRRAIAEYLSRDL 94
K VISL +G+P + + Y P GL R AIAE L +
Sbjct: 26 KDVISLGIGEPDFDT-----PQHIKEYAKEALDKGLTHYGPNIGLLELREAIAEKLKKQN 80
Query: 95 PYKLTP-NDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYE---LSAAFRHIEVRH 150
+ P ++ V G QA + ++ + G +L+P P F Y + A + +EV
Sbjct: 81 GIEADPKTEIMVLLGANQAFLMGLSAFLKDGEEVLIPTPAFVSYAPAVILAGGKPVEVPT 140
Query: 151 FDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVI 210
++ + + +++D+++ T AL+I +P NP G V + + L+++A+ + +VI
Sbjct: 141 YE---EDEFRLNVDELKKYVTDKTRALIINSPCNPTGAVLTKKDLEEIADFVVEHDLIVI 197
Query: 211 ADEVYGHLVFGDKPFVPM----GVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMF 266
+DEVY H ++ D + G+F T+ T+ SK + + GWRLG FV
Sbjct: 198 SDEVYEHFIYDDARHYSIASLDGMFERTI---TVNGFSKTFAMTGWRLG-FVAAPSW--- 250
Query: 267 RKPKVVERMKKYFDILGD--PATFIQAAVPSILQQPDEVFFKKTLNLLKQ---SVDICYN 321
++ERM K F + P TFIQ A L+ DE +K + K+ + +
Sbjct: 251 ----IIERMVK-FQMYNATCPVTFIQYAAAKALK--DERSWKAVEEMRKEYDRRRKLVWK 303
Query: 322 KIKEIPCISCPHKPEGSMAVMLKLNLSLLXXXXXXXXFCFKLAKEESVIILPGTAVGL-- 379
++ E+ + KP+G+ + ++ + L F + KE V ++PG+A G
Sbjct: 304 RLNEMGLPTV--KPKGAFYIFPRIRDTGL----TSKKFSELMLKEARVAVVPGSAFGKAG 357
Query: 380 KNWLRVTFAVDPYSLEECLDRIK 402
+ ++R+++A LEE +DR++
Sbjct: 358 EGYVRISYATAYEKLEEAMDRME 380
>pdb|1DJU|A Chain A, Crystal Structure Of Aromatic Aminotransferase From
Pyrococcus Horikoshii Ot3
pdb|1DJU|B Chain B, Crystal Structure Of Aromatic Aminotransferase From
Pyrococcus Horikoshii Ot3
Length = 388
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 99/383 (25%), Positives = 178/383 (46%), Gaps = 43/383 (11%)
Query: 35 KKVISLAMGDPTVHSCFXXXXXXXXXXXXXXXSEKFNGYAPTAGLPLTRRAIAEYLSRDL 94
K VISL +G+P + + Y P GL R AIAE L +
Sbjct: 25 KDVISLGIGEPDFDT-----PQHIKEYAKEALDKGLTHYGPNIGLLELREAIAEKLKKQN 79
Query: 95 PYKLTP-NDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYE---LSAAFRHIEVRH 150
+ P ++ V G QA + ++ + G +L+P P F Y + A + +EV
Sbjct: 80 GIEADPKTEIMVLLGANQAFLMGLSAFLKDGEEVLIPTPAFVSYAPAVILAGGKPVEVPT 139
Query: 151 FDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVI 210
++ + + +++D+++ T AL+I +P NP G V + + L+++A+ + +VI
Sbjct: 140 YE---EDEFRLNVDELKKYVTDKTRALIINSPCNPTGAVLTKKDLEEIADFVVEHDLIVI 196
Query: 211 ADEVYGHLVFGDKPFVPM----GVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMF 266
+DEVY H ++ D + G+F T+ T+ SK + + GWRLG FV
Sbjct: 197 SDEVYEHFIYDDARHYSIASLDGMFERTI---TVNGFSKTFAMTGWRLG-FVAAPSW--- 249
Query: 267 RKPKVVERMKKYFDILGD--PATFIQAAVPSILQQPDEVFFKKTLNLLKQ---SVDICYN 321
++ERM K F + P TFIQ A L+ DE +K + K+ + +
Sbjct: 250 ----IIERMVK-FQMYNATCPVTFIQYAAAKALK--DERSWKAVEEMRKEYDRRRKLVWK 302
Query: 322 KIKEIPCISCPHKPEGSMAVMLKLNLSLLXXXXXXXXFCFKLAKEESVIILPGTAVGL-- 379
++ E+ + KP+G+ + ++ + L F + KE V ++PG+A G
Sbjct: 303 RLNEMGLPTV--KPKGAFYIFPRIRDTGL----TSKKFSELMLKEARVAVVPGSAFGKAG 356
Query: 380 KNWLRVTFAVDPYSLEECLDRIK 402
+ ++R+++A LEE ++R++
Sbjct: 357 EGYVRISYATAYEKLEEAMERME 379
>pdb|1V2D|A Chain A, Crystal Structure Of T.Th Hb8 Glutamine Aminotransferase
pdb|1V2E|A Chain A, Crystal Structure Of T.Th Hb8 Glutamine Aminotransferase
Complex With A-Keto-G-Methylthiobutyrate
pdb|1V2E|B Chain B, Crystal Structure Of T.Th Hb8 Glutamine Aminotransferase
Complex With A-Keto-G-Methylthiobutyrate
pdb|1V2F|A Chain A, Crystal Structure Of T.Th Hb8 Glutamine Aminotransferase
Complex With 3-Phenylpropionate
pdb|1V2F|B Chain B, Crystal Structure Of T.Th Hb8 Glutamine Aminotransferase
Complex With 3-Phenylpropionate
Length = 381
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 95/341 (27%), Positives = 151/341 (44%), Gaps = 45/341 (13%)
Query: 73 YAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRP 132
YAP AGLP R A+AE + + P V VTSG T+A+ V + L PG +++ P
Sbjct: 57 YAPPAGLPALREALAEE------FAVEPESVVVTSGATEALYVLLQSLVGPGDEVVVLEP 110
Query: 133 GFPIYELSAAFRHIEVR--HFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVY 190
F +Y A + R DL P+ G+ +DL +E T AL++ P NP G V+
Sbjct: 111 FFDVYLPDAFLAGAKARLVRLDLTPE-GFRLDLSALEKALTPRTRALLLNTPMNPTGLVF 169
Query: 191 SYQHLQKLAETANKLKTLVIADEVYGHLVFGDKP-----FVPMGVFGSTVPILTLGSLSK 245
+ L+ +A A +I+DEVY L +G++P F P F T+GS K
Sbjct: 170 GERELEAIARLARAHDLFLISDEVYDELYYGERPRRLREFAPERTF-------TVGSAGK 222
Query: 246 RWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQAAVPSILQ-QPDEVF 304
R G+R+GW V P++ M+++ T +QA V L+ E F
Sbjct: 223 RLEATGYRVGWIVGPKEF----MPRLAG-MRQWTSF--SAPTPLQAGVAEALKLARREGF 275
Query: 305 FKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLXXXXXXXXFCFKLA 364
++ ++ D+ ++ + + PEG+ +M +L F+L
Sbjct: 276 YEALREGYRRRRDLLAGGLRAMGLRV--YVPEGTYFLMAELP----------GWDAFRLV 323
Query: 365 KEESVIILPGTAVGL----KNWLRVTFAVDPYSLEECLDRI 401
+E V ++P +A L K+ R F L L+R+
Sbjct: 324 EEARVALIPASAFYLEDPPKDLFRFAFCKTEEELHLALERL 364
>pdb|1O4S|A Chain A, Crystal Structure Of Aspartate Aminotransferase (Tm1255)
From Thermotoga Maritima At 1.90 A Resolution
pdb|1O4S|B Chain B, Crystal Structure Of Aspartate Aminotransferase (Tm1255)
From Thermotoga Maritima At 1.90 A Resolution
Length = 389
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 83/332 (25%), Positives = 145/332 (43%), Gaps = 20/332 (6%)
Query: 73 YAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRP 132
Y G+ R IA+ + ++P+ V VT+G QA+ A L PG +++ P
Sbjct: 74 YTDPRGIYELREGIAKRIGERYKKDISPDQVVVTNGAKQALFNAFMALLDPGDEVIVFSP 133
Query: 133 GFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSY 192
+ Y V + K ++ L+++E L T A++I +P NP G VY
Sbjct: 134 VWVSYIPQIILAGGTVNVVETFMSKNFQPSLEEVEGLLVGKTKAVLINSPNNPTGVVYRR 193
Query: 193 QHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGW 252
+ L+ L A K +I+DEVY LV+ D+ + V I+ + SK + GW
Sbjct: 194 EFLEGLVRLAKKRNFYIISDEVYDSLVYTDEFTSILDVSEGFDRIVYINGFSKSHSMTGW 253
Query: 253 RLGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLL 312
R+G+ ++++ KV + K I + I + EV +
Sbjct: 254 RVGYLISSE--------KVATAVSK---IQSHTTSCINTVAQYAALKALEVDNSYMVQTF 302
Query: 313 KQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLXXXXXXXXFCFKLAKEESVIIL 372
K+ + ++K++ +PEG+ + K+ FC +L +E+ V ++
Sbjct: 303 KERKNFVVERLKKMGVKFV--EPEGAFYLFFKVR-------GDDVKFCERLLEEKKVALV 353
Query: 373 PGTAVGLKNWLRVTFAVDPYSLEECLDRIKSF 404
PG+A ++R++FA L E LDRI+ F
Sbjct: 354 PGSAFLKPGFVRLSFATSIERLTEALDRIEDF 385
>pdb|1GCK|A Chain A, Thermus Thermophilus Aspartate Aminotransferase Double
Mutant 1 Complexed With Aspartate
pdb|1GCK|B Chain B, Thermus Thermophilus Aspartate Aminotransferase Double
Mutant 1 Complexed With Aspartate
pdb|1B5P|A Chain A, Thermus Thermophilus Aspartate Aminotransferase Double
Mutant 1
pdb|1B5P|B Chain B, Thermus Thermophilus Aspartate Aminotransferase Double
Mutant 1
Length = 385
Score = 98.2 bits (243), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 83/339 (24%), Positives = 144/339 (42%), Gaps = 22/339 (6%)
Query: 73 YAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRP 132
YAP AG+P R A+AE R+ +TP + VT G +QA+ + PG +++ P
Sbjct: 64 YAPPAGIPELREALAEKFRRENGLSVTPEETIVTVGGSQALFNLFQAILDPGDEVIVLSP 123
Query: 133 GFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSY 192
+ Y F V + LP++G+ D + + T ALV+ +P NP G VY
Sbjct: 124 YWVSYPEMVRFAGGVVVEVETLPEEGFVPDPERVRRAITPRTKALVVNSPNNPTGAVYPK 183
Query: 193 QHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVP--ILTLGSLSKRWIVP 250
+ L+ LA A + +++DE+Y HL++ + F P G P LT+ +K + +
Sbjct: 184 EVLEALARLAVEHDFYLVSDEIYEHLLYEGEHFSP----GRVAPEHTLTVNGAAKAFAMT 239
Query: 251 GWRLGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQAAVPSIL--QQPDEVFFKKT 308
GWR+G+ CG K + + + P T Q A L Q+ F +
Sbjct: 240 GWRIGY-----ACGPKEVIKAMASVSRQSTT--SPDTIAQWATLEALTNQEASRAFVEMA 292
Query: 309 LNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLXXXXXXXXFCFKLAKEES 368
++ D+ + + + +P G+ V++ + E
Sbjct: 293 REAYRRRRDLLLEGLTALGLKAV--RPSGAFYVLMDTSPIAPDEVRAAERLL-----EAG 345
Query: 369 VIILPGTAVGLKNWLRVTFAVDPYSLEECLDRIKSFYQR 407
V ++PGT +R+++A +L + L+R R
Sbjct: 346 VAVVPGTDFAAFGHVRLSYATSEENLRKALERFARVLGR 384
>pdb|5BJ3|A Chain A, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 1
pdb|5BJ3|B Chain B, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 1
pdb|5BJ3|C Chain C, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 1
pdb|5BJ3|D Chain D, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 1
Length = 385
Score = 98.2 bits (243), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 83/339 (24%), Positives = 144/339 (42%), Gaps = 22/339 (6%)
Query: 73 YAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRP 132
YAP AG+P R A+AE R+ +TP + VT G +QA+ + PG +++ P
Sbjct: 64 YAPPAGIPELREALAEKFRRENGLSVTPEETIVTVGGSQALFNLFQAILDPGDEVIVLSP 123
Query: 133 GFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSY 192
+ Y F V + LP++G+ D + + T ALV+ +P NP G VY
Sbjct: 124 YWVSYPEMVRFAGGVVVEVETLPEEGFVPDPERVRRAITPRTKALVVNSPNNPTGAVYPK 183
Query: 193 QHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVP--ILTLGSLSKRWIVP 250
+ L+ LA A + +++DE+Y HL++ + F P G P LT+ +K + +
Sbjct: 184 EVLEALARLAVEHDFYLVSDEIYEHLLYEGEHFSP----GRVAPEHTLTVNGAAKAFAMT 239
Query: 251 GWRLGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQAAVPSIL--QQPDEVFFKKT 308
GWR+G+ CG K + + + P T Q A L Q+ F +
Sbjct: 240 GWRIGY-----ACGPKEVIKAMASVSRQSTT--SPDTIAQWATLEALTNQEASRAFVEMA 292
Query: 309 LNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLXXXXXXXXFCFKLAKEES 368
++ D+ + + + +P G+ V++ + E
Sbjct: 293 REAYRRRRDLLLEGLTALGLKAV--RPSGAFYVLMDTSPIAPDEVRAAERLL-----EAG 345
Query: 369 VIILPGTAVGLKNWLRVTFAVDPYSLEECLDRIKSFYQR 407
V ++PGT +R+++A +L + L+R R
Sbjct: 346 VAVVPGTDFAAFGHVRLSYATSEENLRKALERFARVLGR 384
>pdb|1GC3|A Chain A, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Tryptophan
pdb|1GC3|B Chain B, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Tryptophan
pdb|1GC3|C Chain C, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Tryptophan
pdb|1GC3|D Chain D, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Tryptophan
pdb|1GC3|E Chain E, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Tryptophan
pdb|1GC3|F Chain F, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Tryptophan
pdb|1GC3|G Chain G, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Tryptophan
pdb|1GC3|H Chain H, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Tryptophan
pdb|1GC4|A Chain A, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Aspartate
pdb|1GC4|B Chain B, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Aspartate
pdb|1GC4|C Chain C, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Aspartate
pdb|1GC4|D Chain D, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Aspartate
pdb|5BJ4|A Chain A, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2
pdb|5BJ4|B Chain B, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2
Length = 385
Score = 98.2 bits (243), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 83/339 (24%), Positives = 144/339 (42%), Gaps = 22/339 (6%)
Query: 73 YAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRP 132
YAP AG+P R A+AE R+ +TP + VT G +QA+ + PG +++ P
Sbjct: 64 YAPPAGIPELREALAEKFRRENGLSVTPEETIVTVGGSQALFNLFQAILDPGDEVIVLSP 123
Query: 133 GFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSY 192
+ Y F V + LP++G+ D + + T ALV+ +P NP G VY
Sbjct: 124 YWVSYPEMVRFAGGVVVEVETLPEEGFVPDPERVRRAITPRTKALVVNSPNNPTGAVYPK 183
Query: 193 QHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVP--ILTLGSLSKRWIVP 250
+ L+ LA A + +++DE+Y HL++ + F P G P LT+ +K + +
Sbjct: 184 EVLEALARLAVEHDFYLVSDEIYEHLLYEGEHFSP----GRVAPEHTLTVNGAAKAFAMT 239
Query: 251 GWRLGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQAAVPSIL--QQPDEVFFKKT 308
GWR+G+ CG K + + + P T Q A L Q+ F +
Sbjct: 240 GWRIGY-----ACGPKEVIKAMASVSRQSTT--SPDTIAQWATLEALTNQEASRAFVEMA 292
Query: 309 LNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLXXXXXXXXFCFKLAKEES 368
++ D+ + + + +P G+ V++ + E
Sbjct: 293 REAYRRRRDLLLEGLTALGLKAV--RPSGAFYVLMDTSPIAPDEVRAAERLL-----EAG 345
Query: 369 VIILPGTAVGLKNWLRVTFAVDPYSLEECLDRIKSFYQR 407
V ++PGT +R+++A +L + L+R R
Sbjct: 346 VAVVPGTDFAAFGHVRLSYATSEENLRKALERFARVLGR 384
>pdb|1B5O|A Chain A, Thermus Thermophilus Aspartate Aminotransferase Single
Mutant 1
pdb|1B5O|B Chain B, Thermus Thermophilus Aspartate Aminotransferase Single
Mutant 1
Length = 385
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 88/342 (25%), Positives = 150/342 (43%), Gaps = 28/342 (8%)
Query: 73 YAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAI-DVAMALLSRPGANILLPR 131
YAP AG+P R A+AE R+ +TP + VT G +QA+ ++ A+L PG +++
Sbjct: 64 YAPPAGIPELREALAEKFRRENGLSVTPEETIVTVGGSQALFNLFQAILD-PGDEVIVLS 122
Query: 132 PGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYS 191
P + Y F V + LP++G+ D + + T ALV+ +P NP G VY
Sbjct: 123 PYWVSYPEMVRFAGGVVVEVETLPEEGFVPDPERVRRAITPRTKALVVNSPNNPTGAVYP 182
Query: 192 YQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVP--ILTLGSLSKRWIV 249
+ L+ LA A + +++DE+Y HL++ + F P G P LT+ +K + +
Sbjct: 183 KEVLEALARLAVEHDFYLVSDEIYEHLLYEGEHFSP----GRVAPEHTLTVNGAAKAFAM 238
Query: 250 PGWRLGWFVTTDPCGMFRKPK-VVERMKKY-FDILGDPATFIQAAVPSIL--QQPDEVFF 305
GWR+G+ CG PK V++ M P T Q A L Q+ F
Sbjct: 239 TGWRIGY-----ACG----PKEVIKAMASVSSQSTTSPDTIAQWATLEALTNQEASRAFV 289
Query: 306 KKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLXXXXXXXXFCFKLAK 365
+ ++ D+ + + + +P G+ V++ +
Sbjct: 290 EMAREAYRRRRDLLLEGLTALGLKAV--RPSGAFYVLMDTSPIAPDEVRAAERLL----- 342
Query: 366 EESVIILPGTAVGLKNWLRVTFAVDPYSLEECLDRIKSFYQR 407
E V ++PGT +R+++A +L + L+R R
Sbjct: 343 EAGVAVVPGTDFAAFGHVRLSYATSEENLRKALERFARVLGR 384
>pdb|3ELE|A Chain A, Crystal Structure Of Amino Transferase (rer070207001803)
From Eubacterium Rectale At 2.10 A Resolution
pdb|3ELE|B Chain B, Crystal Structure Of Amino Transferase (rer070207001803)
From Eubacterium Rectale At 2.10 A Resolution
pdb|3ELE|C Chain C, Crystal Structure Of Amino Transferase (rer070207001803)
From Eubacterium Rectale At 2.10 A Resolution
pdb|3ELE|D Chain D, Crystal Structure Of Amino Transferase (rer070207001803)
From Eubacterium Rectale At 2.10 A Resolution
Length = 398
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 95/362 (26%), Positives = 159/362 (43%), Gaps = 47/362 (12%)
Query: 67 SEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAM-ALLSRPGA 125
S +GY G TR AIAE+L+ ++++ T G ++ + AL S
Sbjct: 66 SVALHGYTSAQGDVETRAAIAEFLNNTHGTHFNADNLYXTXGAAASLSICFRALTSDAYD 125
Query: 126 NILLPRPGFPIYEL---SAAFRHIEV----RHFDLLPDKGWEVDLDDIESLADQNTVALV 178
+ P FP Y++ +A R +EV HF ++D D +E + +T ++
Sbjct: 126 EFITIAPYFPEYKVFVNAAGARLVEVPADTEHF--------QIDFDALEERINAHTRGVI 177
Query: 179 IINPGNPCGNVYSYQHLQKLAETANKLKT------LVIADEVYGHLVF-GDK-PFVPMGV 230
I +P NP G VYS + ++KL++ K +IADE Y +V+ G K PFV
Sbjct: 178 INSPNNPSGTVYSEETIKKLSDLLEKKSKEIGRPIFIIADEPYREIVYDGIKVPFVTK-Y 236
Query: 231 FGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQ 290
+ +T L S SK +PG R+G+ + D +V ++ + Y + G
Sbjct: 237 YDNT---LVCYSYSKSLSLPGERIGYVLVPD--------EVYDKAELYAAVCGAGRALGY 285
Query: 291 AAVPSILQQPDEVFFKKT--LNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLS 348
PS+ Q+ T +N K++ D+ Y + I C KP+G+ +K
Sbjct: 286 VCAPSLFQKXIVKCQGATGDINAYKENRDLLYEGLTRIG-YHC-FKPDGAFYXFVK---- 339
Query: 349 LLXXXXXXXXFCFKLAKEESVIILPGTAVGLKNWLRVTFAVDPYSLEECLDRIKSFYQRH 408
FC K AKEE V+I+ G W+R+++ VD ++ + Y+++
Sbjct: 340 --ALEDDSNAFCEK-AKEEDVLIVAADGFGCPGWVRISYCVDREXIKHSXPAFEKIYKKY 396
Query: 409 AK 410
K
Sbjct: 397 NK 398
>pdb|1BKG|A Chain A, Aspartate Aminotransferase From Thermus Thermophilus With
Maleate
pdb|1BKG|B Chain B, Aspartate Aminotransferase From Thermus Thermophilus With
Maleate
pdb|1BKG|C Chain C, Aspartate Aminotransferase From Thermus Thermophilus With
Maleate
pdb|1BKG|D Chain D, Aspartate Aminotransferase From Thermus Thermophilus With
Maleate
Length = 385
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 86/341 (25%), Positives = 145/341 (42%), Gaps = 26/341 (7%)
Query: 73 YAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRP 132
YAP AG+P R A+AE R+ +TP + VT G QA+ + PG +++ P
Sbjct: 64 YAPPAGIPELREALAEKFRRENGLSVTPEETIVTVGGKQALFNLFQAILDPGDEVIVLSP 123
Query: 133 GFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSY 192
+ Y F V + LP++G+ D + + T ALV+ +P NP G VY
Sbjct: 124 YWVSYPEMVRFAGGVVVEVETLPEEGFVPDPERVRRAITPRTKALVVNSPNNPTGAVYPK 183
Query: 193 QHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVP--ILTLGSLSKRWIVP 250
+ L+ LA A + +++DE+Y HL++ + F P G P LT+ +K + +
Sbjct: 184 EVLEALARLAVEHDFYLVSDEIYEHLLYEGEHFSP----GRVAPEHTLTVNGAAKAFAMT 239
Query: 251 GWRLGWFVTTDPCGMFRKPK-VVERMKKY-FDILGDPATFIQAAVPSIL--QQPDEVFFK 306
GWR+G+ CG PK V++ M P T Q A L Q+ F +
Sbjct: 240 GWRIGY-----ACG----PKEVIKAMASVSSQSTTSPDTIAQWATLEALTNQEASRAFVE 290
Query: 307 KTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLXXXXXXXXFCFKLAKE 366
++ D+ + + + +P G+ V++ + E
Sbjct: 291 MAREAYRRRRDLLLEGLTALGLKAV--RPSGAFYVLMDTSPIAPDEVRAAERLL-----E 343
Query: 367 ESVIILPGTAVGLKNWLRVTFAVDPYSLEECLDRIKSFYQR 407
V ++PGT +R+++A +L + L+R R
Sbjct: 344 AGVAVVPGTDFAAFGHVRLSYATSEENLRKALERFARVLGR 384
>pdb|1BJW|A Chain A, Aspartate Aminotransferase From Thermus Thermophilus
pdb|1BJW|B Chain B, Aspartate Aminotransferase From Thermus Thermophilus
Length = 382
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 84/334 (25%), Positives = 143/334 (42%), Gaps = 26/334 (7%)
Query: 73 YAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRP 132
YAP AG+P R A+AE R+ +TP + VT G QA+ + PG +++ P
Sbjct: 64 YAPPAGIPELREALAEKFRRENGLSVTPEETIVTVGGKQALFNLFQAILDPGDEVIVLSP 123
Query: 133 GFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSY 192
+ Y F V + LP++G+ D + + T ALV+ +P NP G VY
Sbjct: 124 YWVSYPEMVRFAGGVVVEVETLPEEGFVPDPERVRRAITPRTKALVVNSPNNPTGAVYPK 183
Query: 193 QHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVP--ILTLGSLSKRWIVP 250
+ L+ LA A + +++DE+Y HL++ + F P G P LT+ + + +
Sbjct: 184 EVLEALARLAVEHDFYLVSDEIYEHLLYEGEHFSP----GRVAPEHTLTVNGAAXAFAMT 239
Query: 251 GWRLGWFVTTDPCGMFRKPK-VVERMKKY-FDILGDPATFIQAAVPSIL--QQPDEVFFK 306
GWR+G+ CG PK V++ M P T Q A L Q+ F +
Sbjct: 240 GWRIGY-----ACG----PKEVIKAMASVSSQSTTSPDTIAQWATLEALTNQEASRAFVE 290
Query: 307 KTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLXXXXXXXXFCFKLAKE 366
++ D+ + + + +P G+ V++ + E
Sbjct: 291 MAREAYRRRRDLLLEGLTALGLKAV--RPSGAFYVLMDTSPIAPDEVRAAERLL-----E 343
Query: 367 ESVIILPGTAVGLKNWLRVTFAVDPYSLEECLDR 400
V ++PGT +R+++A +L + L+R
Sbjct: 344 AGVAVVPGTDFAAFGHVRLSYATSEENLRKALER 377
>pdb|1J32|A Chain A, Aspartate Aminotransferase From Phormidium Lapideum
pdb|1J32|B Chain B, Aspartate Aminotransferase From Phormidium Lapideum
Length = 388
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 81/339 (23%), Positives = 147/339 (43%), Gaps = 25/339 (7%)
Query: 73 YAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRP 132
Y P AG P R AIA+ L RD +++ VT+G Q+I M + PG +++P P
Sbjct: 63 YGPAAGEPRLREAIAQKLQRDNGLCYGADNILVTNGGKQSIFNLMLAMIEPGDEVIIPAP 122
Query: 133 GFPIY-ELSAAFRHIEVRHFDLLP---DKGWEVDLDDIESLADQNTVALVIINPGNPCGN 188
+ Y E+ V +LP + ++V + I T LV P NP G
Sbjct: 123 FWVSYPEMVKLAEGTPV----ILPTTVETQFKVSPEQIRQAITPKTKLLVFNTPSNPTGM 178
Query: 189 VYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTV--PILTLGSLSKR 246
VY+ ++ +A+ A + V++DE+Y +++ D + +G + +K
Sbjct: 179 VYTPDEVRAIAQVAVEAGLWVLSDEIYEKILYDDAQHLSIGAASPEAYERSVVCSGFAKT 238
Query: 247 WIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQ-AAVPSILQQPDEVFF 305
+ + GWR+G+ P V K + TF Q A+ + D V
Sbjct: 239 YAMTGWRVGFLAGPVPL-------VKAATKIQGHSTSNVCTFAQYGAIAAYENSQDCV-- 289
Query: 306 KKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLXXXXXXXXFCFKLAK 365
++ L + + + +P + CP KP+G+ + S+ FC +L
Sbjct: 290 QEMLAAFAERRRYMLDALNAMPGLECP-KPDGAFYMF----PSIAKTGRSSLDFCSELLD 344
Query: 366 EESVIILPGTAVGLKNWLRVTFAVDPYSLEECLDRIKSF 404
+ V +PG A G + +R+++A D +++ ++R++ F
Sbjct: 345 QHQVATVPGAAFGADDCIRLSYATDLDTIKRGMERLEKF 383
>pdb|3OP7|A Chain A, Crystal Structure Of A Plp-Dependent Aminotransferase
(Zp_03625122.1) From Streptococcus Suis 89-1591 At 1.70
A Resolution
pdb|3P6K|A Chain A, Crystal Structure Of A Plp-Dependent Aminotransferase
(Zp_03625122.1) From Streptococcus Suis 89-1591 At 2.07
A Resolution
pdb|3P6K|B Chain B, Crystal Structure Of A Plp-Dependent Aminotransferase
(Zp_03625122.1) From Streptococcus Suis 89-1591 At 2.07
A Resolution
Length = 375
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 77/340 (22%), Positives = 155/340 (45%), Gaps = 25/340 (7%)
Query: 73 YAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRP 132
Y G P ++++++ L + P + T+G T A + + L PG +++ P
Sbjct: 59 YGWIEGSPAFKKSVSQ-----LYTGVKPEQILQTNGATGANLLVLYSLIEPGDHVISLYP 113
Query: 133 GFP-IYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYS 191
+ +Y++ + EV + + + GW DL+ + L T + I N NP G V
Sbjct: 114 TYQQLYDIPKSL-GAEVDLWQIEEENGWLPDLEKLRQLIRPTTKXICINNANNPTGAVXD 172
Query: 192 YQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPG 251
+L++L E A+++ +++DEVY D P + + V+ + + SLS + +PG
Sbjct: 173 RTYLEELVEIASEVGAYILSDEVYRSFSELDVPSI-IEVYDKGIAV---NSLSXTYSLPG 228
Query: 252 WRLGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQAAVPSILQQPDEVFFKKTLNL 311
R+GW +V + ++ Y D A V + + ++ ++
Sbjct: 229 IRIGWVAANH--------QVTDILRDYRDYTXICAGVFDDLVAQLALAHYQEILERNRHI 280
Query: 312 LKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLXXXXXXXXFCFKLAKEESVII 371
L++++ I I+E P +S +P +K+ + FC +L +E V++
Sbjct: 281 LEENLAILDQWIEEEPLVSYI-RPAVVSTSFVKIAVD-----XPXEDFCLQLLQEHGVLL 334
Query: 372 LPGTAVGLKNWLRVTFAVDPYSLEECLDRIKSFYQRHAKQ 411
+PG ++R+ FA + +L + L+++ F +R K+
Sbjct: 335 VPGNRFERDGYVRLGFACEQETLIKGLEKLSQFLRRFDKE 374
>pdb|2GB3|A Chain A, Crystal Structure Of Aspartate Aminotransferase (Tm1698)
From Thermotoga Maritima At 2.50 A Resolution
pdb|2GB3|B Chain B, Crystal Structure Of Aspartate Aminotransferase (Tm1698)
From Thermotoga Maritima At 2.50 A Resolution
pdb|2GB3|C Chain C, Crystal Structure Of Aspartate Aminotransferase (Tm1698)
From Thermotoga Maritima At 2.50 A Resolution
pdb|2GB3|D Chain D, Crystal Structure Of Aspartate Aminotransferase (Tm1698)
From Thermotoga Maritima At 2.50 A Resolution
pdb|2GB3|E Chain E, Crystal Structure Of Aspartate Aminotransferase (Tm1698)
From Thermotoga Maritima At 2.50 A Resolution
pdb|2GB3|F Chain F, Crystal Structure Of Aspartate Aminotransferase (Tm1698)
From Thermotoga Maritima At 2.50 A Resolution
Length = 409
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 123/278 (44%), Gaps = 22/278 (7%)
Query: 73 YAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRP 132
Y+ +AG+ R A A Y R + P +V VT+G ++AI + A+++ PG IL+ P
Sbjct: 75 YSHSAGIWELREAFASYYKRRQRVDVKPENVLVTNGGSEAILFSFAVIANPGDEILVLEP 134
Query: 133 GFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSY 192
+ Y A +++ ++G+ + ++ES ++ T +V+ NP NP G VY
Sbjct: 135 FYANYNAFAKIAGVKLIPVTRRXEEGFAIP-QNLESFINERTKGIVLSNPCNPTGVVYGK 193
Query: 193 QHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPI-----LTLGSLSKRW 247
+ L E A + +I DEVY +VF G F S + I + + S+S ++
Sbjct: 194 DEXRYLVEIAERHGLFLIVDEVYSEIVF-------RGEFASALSIESDKVVVIDSVSXKF 246
Query: 248 IVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQAAVPSILQQPDEVFFKK 307
G R+G +T R +++ K P Q +L D+ FF
Sbjct: 247 SACGARVGCLIT-------RNEELISHAXKLAQGRLAPPLLEQIGSVGLLNL-DDSFFDF 298
Query: 308 TLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKL 345
++ V+ K++E + KP G+ + +L
Sbjct: 299 VRETYRERVETVLKKLEE-HGLKRFTKPSGAFYITAEL 335
>pdb|2O0R|A Chain A, The Three-Dimensional Structure Of
N-Succinyldiaminopimelate Aminotransferase From
Mycobacterium Tuberculosis
pdb|2O0R|B Chain B, The Three-Dimensional Structure Of
N-Succinyldiaminopimelate Aminotransferase From
Mycobacterium Tuberculosis
Length = 411
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/228 (32%), Positives = 101/228 (44%), Gaps = 10/228 (4%)
Query: 101 NDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPD-KGW 159
+V VT G T+AI A+ L PG+ +LL P + Y A L+PD +G+
Sbjct: 87 TEVLVTVGATEAIAAAVLGLVEPGSEVLLIEPFYDSYSPVVAMAGAHRVTVPLVPDGRGF 146
Query: 160 EVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLV 219
+D D + T AL+I +P NP G V S L +AE A +VI DEVY HLV
Sbjct: 147 ALDADALRRAVTPRTRALIINSPHNPTGAVLSATELAAIAEIAVAANLVVITDEVYEHLV 206
Query: 220 FGDKPFVPMGVF-GSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKY 278
F +P+ F G +T+ S + + GW++GW CG V K+Y
Sbjct: 207 FDHARHLPLAGFDGMAERTITISSAAXMFNCTGWKIGW-----ACGPAELIAGVRAAKQY 261
Query: 279 FDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEI 326
+G A F Q AV L D + N L+ D + EI
Sbjct: 262 LSYVGG-APF-QPAVALALDTED-AWVAALRNSLRARRDRLAAGLTEI 306
>pdb|3IHJ|A Chain A, Human Alanine Aminotransferase 2 In Complex With Plp
Length = 498
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 83/383 (21%), Positives = 167/383 (43%), Gaps = 50/383 (13%)
Query: 73 YAPTAGLPLTRRAIAEYLSR-DLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGA----NI 127
Y+ + G+ R +A Y++R D P+++++T+G + I + +L G +
Sbjct: 125 YSASQGVNCIREDVAAYITRRDGGVPADPDNIYLTTGASDGISTILKILVSGGGKSRTGV 184
Query: 128 LLPRPGFPIYE-LSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ-----NTVALVIIN 181
++P P +P+Y + + I+V ++ L + W ++++++ + + L IIN
Sbjct: 185 MIPIPQYPLYSAVISELDAIQVNYY-LDEENCWALNVNELRRAVQEAKDHCDPKVLCIIN 243
Query: 182 PGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFG--------DKPFVPMG-VFG 232
PGNP G V S + ++ + A + K ++ADEVY V+ K MG +
Sbjct: 244 PGNPTGQVQSRKCIEDVIHFAWEEKLFLLADEVYQDNVYSPDCRFHSFKKVLYEMGPEYS 303
Query: 233 STVPILTLGSLSKRWIVP-GWRLGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQA 291
S V + + S SK ++ G+R G+ + P++ ++ K + P QA
Sbjct: 304 SNVELASFHSTSKGYMGECGYRGGYMEVIN-----LHPEIKGQLVKLLSVRLCPPVSGQA 358
Query: 292 AVPSILQQP---DEVFFK------KTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVM 342
A+ ++ P +E F + L L + + + ++P I C + +G+M
Sbjct: 359 AMDIVVNPPVAGEESFEQFSREKESVLGNLAKKAKLTEDLFNQVPGIHC-NPLQGAMYAF 417
Query: 343 LKL-------NLSLLXXXXXXXXFCFKLAKEESVIILPGTAVGLKN---WLRVTFAVDPY 392
++ + +C KL +E + ++PG+ G + R+T
Sbjct: 418 PRIFIPAKAVEAAQAHQMAPDMFYCMKLLEETGICVVPGSGFGQREGTYHFRMTILPPVE 477
Query: 393 SLEECLDRIKSFYQRHAKQLQRY 415
L+ L ++K F H L++Y
Sbjct: 478 KLKTVLQKVKDF---HINFLEKY 497
>pdb|3TCM|A Chain A, Crystal Structure Of Alanine Aminotransferase From Hordeum
Vulgare
pdb|3TCM|B Chain B, Crystal Structure Of Alanine Aminotransferase From Hordeum
Vulgare
Length = 500
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 79/343 (23%), Positives = 150/343 (43%), Gaps = 48/343 (13%)
Query: 73 YAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGAN-ILLPR 131
Y+ + G+ R AIA ++ + +D+F+T G + + + M LL R + IL+P
Sbjct: 130 YSHSQGIHGLRDAIASGIASRDGFPANADDIFLTDGASPGVHLMMQLLIRNEKDGILVPI 189
Query: 132 PGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIE-SLADQ-----NTVALVIINPGNP 185
P +P+Y S A + + L GW ++ D++ L D N ALV+INPGNP
Sbjct: 190 PQYPLYSASIALHGGALVPYYLNESTGWGLETSDVKKQLEDARSRGINVRALVVINPGNP 249
Query: 186 CGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGD--------KPFVPMGVFGSTVPI 237
G V + ++ + + +++ADEVY ++ D K +G +P+
Sbjct: 250 TGQVLAEENQYDIVKFCKNEGLVLLADEVYQENIYVDNKKFHSFKKIVRSLGYGEEDLPL 309
Query: 238 LTLGSLSKRWIVP-GWRLGWFVTTDPCGMFRKPKVVERMKKYFDI--------------L 282
++ S+SK + G R G+F T F P V E++ K + +
Sbjct: 310 VSYQSVSKGYYGECGKRGGYFEITG----FSAP-VREQIYKIASVNLCSNITGQILASLV 364
Query: 283 GDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVM 342
+P + S + D + +L ++++ +NK++ I C ++ EG+M V
Sbjct: 365 MNPPKASDESYASYKAEKDGIL--ASLARRAKALEHAFNKLEGITC----NEAEGAMYVF 418
Query: 343 LKLNL-------SLLXXXXXXXXFCFKLAKEESVIILPGTAVG 378
++ L + + +L + ++++PG+ G
Sbjct: 419 PQICLPQKAIEAAKAANKAPDAFYALRLLESTGIVVVPGSGFG 461
>pdb|3B46|A Chain A, Crystal Structure Of Bna3p, A Putative Kynurenine
Aminotransferase From Saccharomyces Cerevisiae
pdb|3B46|B Chain B, Crystal Structure Of Bna3p, A Putative Kynurenine
Aminotransferase From Saccharomyces Cerevisiae
Length = 447
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 88/203 (43%), Gaps = 13/203 (6%)
Query: 71 NGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLP 130
N Y+PT G P ++ + S +L +V VT+G + I + L G +++
Sbjct: 89 NQYSPTRGRPSLINSLIKLYSPIYNTELKAENVTVTTGANEGILSCLMGLLNAGDEVIVF 148
Query: 131 RPGFPIYELSAAFRHIEVRHFDLLPDKG----------WEVDLDDIESLADQNTVALVII 180
P F Y + +V + + P K W +D + E T A++I
Sbjct: 149 EPFFDQYIPNIELCGGKVVYVPINPPKELDQRNTRGEEWTIDFEQFEKAITSKTKAVIIN 208
Query: 181 NPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTL 240
P NP G V++ + L L K ++I+DEVY HL F D F + + LTL
Sbjct: 209 TPHNPIGKVFTREELTTLGNICVKHNVVIISDEVYEHLYFTDS-FTRIATLSPEIGQLTL 267
Query: 241 --GSLSKRWIVPGWRLGWFVTTD 261
GS + GWR+GW ++ +
Sbjct: 268 TVGSAGXSFAATGWRIGWVLSLN 290
>pdb|2Z61|A Chain A, Crystal Structure Of Mj0684 From Methanococcus Jannaschii
Reveals Its Similarity In The Active Site To Kynurenine
Aminotransferases
Length = 370
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 80/380 (21%), Positives = 154/380 (40%), Gaps = 37/380 (9%)
Query: 31 EKNEKKVISLAMGDPTVHSCFXXXXXXXXXXXXXXXSEKFNGYAPTAGLPLTRRAIAEYL 90
E KKVI L +G+P ++ E Y + G+ R I+E
Sbjct: 25 ESEGKKVIHLEIGEPDFNT-----PKPIVDEGIKSLKEGKTHYTDSRGILELREKISELY 79
Query: 91 SRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRH 150
+ P+++ +T G + + A++ + G +L+ P +P Y+ F +
Sbjct: 80 KDKYKADIIPDNIIITGGSSLGLFFALSSIIDDGDEVLIQNPCYPCYKNFIRFLGAKPVF 139
Query: 151 FDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVI 210
D ++ +E T A++I +P NP G V +++ E A + +I
Sbjct: 140 CDFT--------VESLEEALSDKTKAIIINSPSNPLGEVID----REIYEFAYENIPYII 187
Query: 211 ADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPK 270
+DE+Y LV+ K + + + + + S + + GWR+G+ ++ D +
Sbjct: 188 SDEIYNGLVYEGKCYSAIEFDENLEKTILINGFSXLYAMTGWRIGYVISND--------E 239
Query: 271 VVERMKKYFDILGDPA-TFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCI 329
++E + K L A T Q A ++ E + + + +K+
Sbjct: 240 IIEAILKLQQNLFISAPTISQYAALKAFEKETEREINSMIKEFDRRRRLVLKYVKDFGW- 298
Query: 330 SCPHKPEGSMAVMLKLNLSLLXXXXXXXXFCFKLAKEESVIILPGTAVGL--KNWLRVTF 387
+ P G+ V + F +KL KE+ V + PG G KN++R+++
Sbjct: 299 -EVNNPIGAYYVFPNIG-------EDGREFAYKLLKEKFVALTPGIGFGSKGKNYIRISY 350
Query: 388 AVDPYSLEECLDRIKSFYQR 407
A +++E L+RIK F +
Sbjct: 351 ANSYENIKEGLERIKEFLNK 370
>pdb|3E2Z|B Chain B, Crystal Structure Of Mouse Kynurenine Aminotransferase Iii
In Complex With Kynurenine
pdb|3E2Y|A Chain A, Crystal Structure Of Mouse Kynurenine Aminotransferase Iii
In Complex With Glutamine
pdb|3E2Y|B Chain B, Crystal Structure Of Mouse Kynurenine Aminotransferase Iii
In Complex With Glutamine
Length = 410
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 109/237 (45%), Gaps = 18/237 (7%)
Query: 68 EKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPND-VFVTSGCTQAIDVAMALLSRPGAN 126
+ N Y G P +A++ + ++ PN+ + V G ++ ++ L PG
Sbjct: 52 DNMNQYTRGFGHPALVKALSCLYGKIYQRQIDPNEEILVAVGAYGSLFNSIQGLVDPGDE 111
Query: 127 ILLPRPGFPIYE----LSAA---FRHIEVRHFDLLP--DKGWEVDLDDIESLADQNTVAL 177
+++ P + YE ++ A F + + D + W D ++ES T A+
Sbjct: 112 VIIMVPFYDCYEPMVRMAGAVPVFIPLRSKPTDGMKWTSSDWTFDPRELESKFSSKTKAI 171
Query: 178 VIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVF-GSTVP 236
++ P NP G VY+ Q LQ +A+ K TL I+DEVY LV+ V + G
Sbjct: 172 ILNTPHNPLGKVYTRQELQVIADLCVKHDTLCISDEVYEWLVYTGHTHVKIATLPGMWER 231
Query: 237 ILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQAAV 293
+T+GS K + V GW+LGW + P + + + V++ Y AT +QAA+
Sbjct: 232 TITIGSAGKTFSVTGWKLGW--SIGPAHLIKHLQTVQQNSFY-----TCATPLQAAL 281
>pdb|2X5D|A Chain A, Crystal Structure Of A Probable Aminotransferase From
Pseudomonas Aeruginosa
pdb|2X5D|B Chain B, Crystal Structure Of A Probable Aminotransferase From
Pseudomonas Aeruginosa
pdb|2X5D|C Chain C, Crystal Structure Of A Probable Aminotransferase From
Pseudomonas Aeruginosa
pdb|2X5D|D Chain D, Crystal Structure Of A Probable Aminotransferase From
Pseudomonas Aeruginosa
Length = 412
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 81/342 (23%), Positives = 139/342 (40%), Gaps = 27/342 (7%)
Query: 68 EKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTP-NDVFVTSGCTQAIDVAMALLSRPGAN 126
E +GY+ + G+P RRAI+ + ++ P ++ VT G + + M G
Sbjct: 66 EDTHGYSTSRGIPRLRRAISHWYRDRYDVQIDPESEAIVTIGSKEGLAHLMLATLDHGDT 125
Query: 127 ILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPC 186
IL+P P +PI+ A +VR L+P + +L+ + +++ P NP
Sbjct: 126 ILVPNPSYPIHIYGAVIAGAQVRSVPLVPGIDFFNELERAIRESIPKPRMMILGFPSNPT 185
Query: 187 GNVYSYQHLQKLAETANKLKTLVIADEVYGHLVF-GDKPFVPMGVFGSTVPILTLGSLSK 245
+++ A + +V+ D Y +V+ G K M V G+ + +LSK
Sbjct: 186 AQCVELDFFERVVALAKQYDVMVVHDLAYADIVYDGWKAPSIMQVPGAKDIAVEFFTLSK 245
Query: 246 RWIVPGWRLGWFVTTDPCGMFRKPKVVE---RMKKYFDILGDPATFIQAAVPSILQ-QPD 301
+ + GWR+G+ V P++V R+K Y D TF V +I + D
Sbjct: 246 SYNMAGWRIGFMVGN--------PELVSALARIKSYHDY----GTFTPLQVAAIAALEGD 293
Query: 302 EVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLXXXXXXXXFCF 361
+ + +Q D+ ++E + P+ SM V K+ F
Sbjct: 294 QQCVRDIARQYQQRRDVLVKGLREAGWMV--ENPKASMYVWAKIPEPY--AHLGSLEFAK 349
Query: 362 KLAKEESVIILPGTAVGLKNWLRVTFAVDPYSLEECLDRIKS 403
KL ++ V + PG G V FA L E DR++
Sbjct: 350 KLLQDAKVSVSPGIGFGDYGDDHVRFA-----LIENRDRLRQ 386
>pdb|1U08|A Chain A, Crystal Structure And Reactivity Of Ybdl From Escherichia
Coli Identify A Methionine Aminotransferase Function.
pdb|1U08|B Chain B, Crystal Structure And Reactivity Of Ybdl From Escherichia
Coli Identify A Methionine Aminotransferase Function
Length = 386
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 73/311 (23%), Positives = 128/311 (41%), Gaps = 28/311 (9%)
Query: 71 NGYAPTAGLPLTRRAIAEYLSRDLPYKLTPN-DVFVTSGCTQAIDVAMALLSRPGANILL 129
N YAP G+ R AIA+ R Y+ + D+ VT+G T+A+ A+ L R G ++
Sbjct: 61 NQYAPMTGVQALREAIAQKTERLYGYQPDADSDITVTAGATEALYAAITALVRNGDEVIC 120
Query: 130 PRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNV 189
P + Y + A V+ L P + VD + +L + T +++ P NP V
Sbjct: 121 FDPSYDSYAPAIALSGGIVKRMALQPPH-FRVDWQEFAALLSERTRLVILNTPHNPSATV 179
Query: 190 YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVP-ILTLGSLSKRWI 248
+ L + + VI+DEVY H+ F + + + + S K +
Sbjct: 180 WQQADFAALWQAIAGHEIFVISDEVYEHINFSQQGHASVLAHPQLRERAVAVSSFGKTYH 239
Query: 249 VPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDI-LGDPATFIQAAVPSILQQPDEVFFKK 307
+ GW++G+ V P + ++ +Y + PA Q A+ +L+ E +
Sbjct: 240 MTGWKVGYCVAPAPIS-----AEIRKVHQYLTFSVNTPA---QLALADMLRAEPEHYLAL 291
Query: 308 TLNLLKQSVDICYNKIKE-----IPCISCPHKPEGSMAVMLKLNLSLLXXXXXXXXFCFK 362
+ +Q DI N + E +PC EG+ +++ + FC
Sbjct: 292 P-DFYRQKRDILVNALNESRLEILPC-------EGTYFLLVDYS---AVSTLDDVEFCQW 340
Query: 363 LAKEESVIILP 373
L +E V +P
Sbjct: 341 LTQEHGVAAIP 351
>pdb|1W7N|A Chain A, Crystal Structure Of Human Kynurenine Aminotransferase I
In Pmp Form
Length = 422
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 90/203 (44%), Gaps = 12/203 (5%)
Query: 71 NGYAPTAGLPLTRRAIAEYLSRDLPYKLTP-NDVFVTSGCTQAIDVAMALLSRPGANILL 129
N Y T G P + +A + L ++ P +V VT G A+ A L G +++
Sbjct: 61 NQYTKTFGYPPLTKILASFFGELLGQEIDPLRNVLVTVGGYGALFTAFQALVDEGDEVII 120
Query: 130 PRPGFPIYE---LSAAFRHI-------EVRHFDLLPDKGWEVDLDDIESLADQNTVALVI 179
P F YE + A R + +++ +L W++D ++ T ALV+
Sbjct: 121 IEPFFDCYEPMTMMAGGRPVFVSLKPGPIQNGELGSSSNWQLDPMELAGKFTSRTKALVL 180
Query: 180 INPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVF-GSTVPIL 238
P NP G V+S + L+ +A + + I DEVY +V+ + + G L
Sbjct: 181 NTPNNPLGKVFSREELELVASLCQQHDVVCITDEVYQWMVYDGHQHISIASLPGMWERTL 240
Query: 239 TLGSLSKRWIVPGWRLGWFVTTD 261
T+GS K + GW++GW + D
Sbjct: 241 TIGSAGKTFSATGWKVGWVLGPD 263
>pdb|1YIY|A Chain A, Aedes Aegypti Kynurenine Aminotransferase
pdb|1YIY|B Chain B, Aedes Aegypti Kynurenine Aminotransferase
pdb|2R5C|B Chain B, Aedes Kynurenine Aminotransferase In Complex With Cysteine
pdb|2R5E|A Chain A, Aedes Kynurenine Aminotransferase In Complex With
Glutamine
pdb|2R5E|B Chain B, Aedes Kynurenine Aminotransferase In Complex With
Glutamine
Length = 429
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 94/200 (47%), Gaps = 18/200 (9%)
Query: 71 NGYAPTAGLPLTRRAIAEYLSRDLPYKLTP-NDVFVTSGCTQAIDVAMALLSRPGANILL 129
N Y G P +A+++ S+ + + P +V VT G +A+ + G +++
Sbjct: 71 NQYTRGFGHPRLVQALSKLYSQLVDRTINPMTEVLVTVGAYEALYATIQGHVDEGDEVII 130
Query: 130 PRPGFPIYELSAAFRHIEVRHFDLLPDK--------GWEVDLDDIESLADQNTVALVIIN 181
P F YE R L P+K W +D +++E+L ++ T ++I
Sbjct: 131 IEPFFDCYEPMVKAAGGIPRFIPLKPNKTGGTISSADWVLDNNELEALFNEKTKMIIINT 190
Query: 182 PGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVP----- 236
P NP G V L+ +A K L ++DEVY H+VF +PF + + T+P
Sbjct: 191 PHNPLGKVMDRAELEVVANLCKKWNVLCVSDEVYEHMVF--EPFEHIRI--CTLPGMWER 246
Query: 237 ILTLGSLSKRWIVPGWRLGW 256
+T+GS K + + GW++GW
Sbjct: 247 TITIGSAGKTFSLTGWKIGW 266
>pdb|1WST|A Chain A, Crystal Structure Of Multiple Substrate Aminotransferase
(Msat) From Thermococcus Profundus
Length = 417
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 96/393 (24%), Positives = 164/393 (41%), Gaps = 35/393 (8%)
Query: 37 VISLAMGDPTVHSCFXXXXXXXXXXXXXXXSEKFNGYAPTAGLPLTRRAIAEYLSRDLPY 96
VISLA G P + ++K Y T G R A+A ++ +
Sbjct: 43 VISLAGGLPAPETFPVETIKKIAVEVLEEHADKALQYGTTKGFTPLRLALARWMEKRYDI 102
Query: 97 KLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSA--AFRHIEVRHFDL- 153
++ ++ +G QA+D+ + PG I++ P + L+A AF++ + +
Sbjct: 103 PMSKVEIMTVAGSQQALDLIGRVFLNPGDPIVVEAPTY----LAAIQAFKYYDPEFISIP 158
Query: 154 LPDKGWEVDLDDIESLADQNT-----VALVIINPGNPCGNVYSYQHLQKLAETANKLKTL 208
L DKG VDL + + + + + NP G S +KL E AN+ L
Sbjct: 159 LDDKGMRVDLLEEKLEELRKQGKRVKIVYTVSTFQNPAGVTMSVDRRKKLLELANEYDFL 218
Query: 209 VIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRK 268
++ D Y L + +P P+ F ++ LG+ SK + PG+R+GW V P + RK
Sbjct: 219 IVEDGPYSELRYSGEPTPPIKHFDDYGRVIYLGTFSK-ILAPGFRIGW-VAAHPH-LIRK 275
Query: 269 PKVVERMKKYFDILGDPATFIQAAVPSILQQP--DEVFFKKTLNLLKQSVDICYNKIKE- 325
+E K+ D+ + TF QA ++ DE K + K D ++E
Sbjct: 276 ---MEIAKQSIDLCTN--TFGQAIAWKYVENGYLDE-HIPKIIEFYKPRRDAMLEALEEY 329
Query: 326 IPCISCPHKPEGSMAVMLKLNLSLLXXXXXXXXFCFKLAKEESVIILPGTAVGL----KN 381
+P KPEG M V + L + + A + V +PG A + KN
Sbjct: 330 MPEGVEWTKPEGGMFVRVTLPEGI------DTKLMMERAVAKGVAYVPGEAFFVHRDKKN 383
Query: 382 WLRVTFAVDP-YSLEECLDRIKSFYQRHAKQLQ 413
+R+ F P ++ E + R+ + K+++
Sbjct: 384 TMRLNFTYVPEETIREGVRRLAETIKEEMKRVK 416
>pdb|3E2F|A Chain A, Crystal Structure Of Mouse Kynurenine Aminotransferase
Iii, Plp-Bound Form
pdb|3E2F|B Chain B, Crystal Structure Of Mouse Kynurenine Aminotransferase
Iii, Plp-Bound Form
pdb|3E2Z|A Chain A, Crystal Structure Of Mouse Kynurenine Aminotransferase Iii
In Complex With Kynurenine
pdb|2ZJG|A Chain A, Crystal Structural Of Mouse Kynurenine Aminotransferase
Iii
pdb|2ZJG|B Chain B, Crystal Structural Of Mouse Kynurenine Aminotransferase
Iii
Length = 410
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 108/237 (45%), Gaps = 18/237 (7%)
Query: 68 EKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPND-VFVTSGCTQAIDVAMALLSRPGAN 126
+ N Y G P +A++ + ++ PN+ + V G ++ ++ L PG
Sbjct: 52 DNMNQYTRGFGHPALVKALSCLYGKIYQRQIDPNEEILVAVGAYGSLFNSIQGLVDPGDE 111
Query: 127 ILLPRPGFPIYE----LSAA---FRHIEVRHFDLLP--DKGWEVDLDDIESLADQNTVAL 177
+++ P + YE ++ A F + + D + W D ++ES T A+
Sbjct: 112 VIIMVPFYDCYEPMVRMAGAVPVFIPLRSKPTDGMKWTSSDWTFDPRELESKFSSKTKAI 171
Query: 178 VIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVF-GSTVP 236
++ P NP G VY+ Q LQ +A+ K TL I+DEVY LV+ V + G
Sbjct: 172 ILNTPHNPLGKVYTRQELQVIADLCVKHDTLCISDEVYEWLVYTGHTHVKIATLPGMWER 231
Query: 237 ILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQAAV 293
+T+GS + V GW+LGW + P + + + V++ Y AT +QAA+
Sbjct: 232 TITIGSAGXTFSVTGWKLGW--SIGPAHLIKHLQTVQQNSFY-----TCATPLQAAL 281
>pdb|3FVS|A Chain A, Human Kynurenine Aminotransferase I In Complex With
Glycerol
pdb|3FVS|B Chain B, Human Kynurenine Aminotransferase I In Complex With
Glycerol
pdb|3FVU|A Chain A, Crystal Structure Of Human Kynurenine Aminotransferase I
In Complex With Indole-3-acetic Acid
pdb|3FVU|B Chain B, Crystal Structure Of Human Kynurenine Aminotransferase I
In Complex With Indole-3-acetic Acid
pdb|3FVX|A Chain A, Human Kynurenine Aminotransferase I In Complex With Tris
pdb|3FVX|B Chain B, Human Kynurenine Aminotransferase I In Complex With Tris
Length = 422
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 89/203 (43%), Gaps = 12/203 (5%)
Query: 71 NGYAPTAGLPLTRRAIAEYLSRDLPYKLTP-NDVFVTSGCTQAIDVAMALLSRPGANILL 129
N Y T G P + +A + L ++ P +V VT G A+ A L G +++
Sbjct: 61 NQYTKTFGYPPLTKILASFFGELLGQEIDPLRNVLVTVGGYGALFTAFQALVDEGDEVII 120
Query: 130 PRPGFPIYE---LSAAFRHI-------EVRHFDLLPDKGWEVDLDDIESLADQNTVALVI 179
P F YE + A R + +++ +L W++D ++ T ALV+
Sbjct: 121 IEPFFDCYEPMTMMAGGRPVFVSLKPGPIQNGELGSSSNWQLDPMELAGKFTSRTKALVL 180
Query: 180 INPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVF-GSTVPIL 238
P NP G V+S + L+ +A + + I DEVY +V+ + + G L
Sbjct: 181 NTPNNPLGKVFSREELELVASLCQQHDVVCITDEVYQWMVYDGHQHISIASLPGMWERTL 240
Query: 239 TLGSLSKRWIVPGWRLGWFVTTD 261
T+GS + GW++GW + D
Sbjct: 241 TIGSAGXTFSATGWKVGWVLGPD 263
>pdb|1W7L|A Chain A, Crystal Structure Of Human Kynurenine Aminotransferase I
pdb|1W7M|A Chain A, Crystal Structure Of Human Kynurenine Aminotransferase I
In Complex With L-Phe
Length = 422
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 89/203 (43%), Gaps = 12/203 (5%)
Query: 71 NGYAPTAGLPLTRRAIAEYLSRDLPYKLTP-NDVFVTSGCTQAIDVAMALLSRPGANILL 129
N Y T G P + +A + L ++ P +V VT G A+ A L G +++
Sbjct: 61 NQYTKTFGYPPLTKILASFFGELLGQEIDPLRNVLVTVGGYGALFTAFQALVDEGDEVII 120
Query: 130 PRPGFPIYE---LSAAFRHI-------EVRHFDLLPDKGWEVDLDDIESLADQNTVALVI 179
P F YE + A R + +++ +L W++D ++ T ALV+
Sbjct: 121 IEPFFDCYEPMTMMAGGRPVFVSLKPGPIQNGELGSSSNWQLDPMELAGKFTSRTKALVL 180
Query: 180 INPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVF-GSTVPIL 238
P NP G V+S + L+ +A + + I DEVY +V+ + + G L
Sbjct: 181 NTPNNPLGKVFSREELELVASLCQQHDVVCITDEVYQWMVYDGHQHISIASLPGMWERTL 240
Query: 239 TLGSLSKRWIVPGWRLGWFVTTD 261
T+GS + GW++GW + D
Sbjct: 241 TIGSAGXTFSATGWKVGWVLGPD 263
>pdb|1YIZ|A Chain A, Aedes Aegypti Kynurenine Aminotrasferase
pdb|1YIZ|B Chain B, Aedes Aegypti Kynurenine Aminotrasferase
pdb|2R5C|A Chain A, Aedes Kynurenine Aminotransferase In Complex With Cysteine
Length = 429
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 93/200 (46%), Gaps = 18/200 (9%)
Query: 71 NGYAPTAGLPLTRRAIAEYLSRDLPYKLTP-NDVFVTSGCTQAIDVAMALLSRPGANILL 129
N Y G P +A+++ S+ + + P +V VT G +A+ + G +++
Sbjct: 71 NQYTRGFGHPRLVQALSKLYSQLVDRTINPMTEVLVTVGAYEALYATIQGHVDEGDEVII 130
Query: 130 PRPGFPIYELSAAFRHIEVRHFDLLPDK--------GWEVDLDDIESLADQNTVALVIIN 181
P F YE R L P+K W +D +++E+L ++ T ++I
Sbjct: 131 IEPFFDCYEPMVKAAGGIPRFIPLKPNKTGGTISSADWVLDNNELEALFNEKTKMIIINT 190
Query: 182 PGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVP----- 236
P NP G V L+ +A K L ++DEVY H+VF +PF + + T+P
Sbjct: 191 PHNPLGKVMDRAELEVVANLCKKWNVLCVSDEVYEHMVF--EPFEHIRI--CTLPGMWER 246
Query: 237 ILTLGSLSKRWIVPGWRLGW 256
+T+GS + + GW++GW
Sbjct: 247 TITIGSAGXTFSLTGWKIGW 266
>pdb|2ZC0|A Chain A, Crystal Structure Of An Archaeal Alanine:glyoxylate
Aminotransferase
pdb|2ZC0|B Chain B, Crystal Structure Of An Archaeal Alanine:glyoxylate
Aminotransferase
pdb|2ZC0|C Chain C, Crystal Structure Of An Archaeal Alanine:glyoxylate
Aminotransferase
pdb|2ZC0|D Chain D, Crystal Structure Of An Archaeal Alanine:glyoxylate
Aminotransferase
Length = 407
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 95/395 (24%), Positives = 158/395 (40%), Gaps = 48/395 (12%)
Query: 17 IKG--MLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFXXXXXXXXXXXXXXXSEKFNGYA 74
IKG + ++ ++ + +K K+ISLA GDP K Y
Sbjct: 14 IKGSALADVMKKASELQKKGVKLISLAAGDPD-PELIPRAVLGEIAKEVLEKEPKSVMYT 72
Query: 75 PTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGF 134
P G+P R +A +L + +++P ++ +T G T A+D+ +L PG ++ P +
Sbjct: 73 PANGIPELREELAAFLKKYDHLEVSPENIVITIGGTGALDLLGRVLIDPGDVVITENPSY 132
Query: 135 -----PIYELSAAFRHIEVRHFDLLPDKGWEVDL--DDIESL-ADQNTVALVIINPG--N 184
+L A + V + G VDL + I+ L A V L+ P N
Sbjct: 133 INTLLAFEQLGAKIEGVPVD------NDGMRVDLLEEKIKELKAKGQKVKLIYTIPTGQN 186
Query: 185 PCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLS 244
P G S + + L E A+K L+I D Y + + VP+ + ++ G+LS
Sbjct: 187 PMGVTMSMERRKALLEIASKYDLLIIEDTAYNFMRYEGGDIVPLKALDNEGRVIVAGTLS 246
Query: 245 KRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQAAVPS--ILQQPDE 302
K + G+R+GW + E +KK + P F A+ L+
Sbjct: 247 K-VLGTGFRIGWIIAEG-----------EILKKVL-MQKQPIDFCAPAISQYIALEYLKR 293
Query: 303 VFFKK-----TLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLXXXXXXX 357
+F+K L K+ DI ++ + KP M VM L
Sbjct: 294 GYFEKYHLEGALLGYKEKRDIMLKALENHLPNAEFTKPIAGMFVMF-----FLPEGADGI 348
Query: 358 XFCFKLAKEESVIILPG----TAVGLKNWLRVTFA 388
F +L + E V+++PG T KN +R+ F+
Sbjct: 349 SFANELMEREGVVVVPGKPFYTDESGKNAIRLNFS 383
>pdb|3AOV|A Chain A, Crystal Structure Of Pyrococcus Horikoshii Kynurenine
Aminotransferase In Complex With Plp
pdb|3AOV|C Chain C, Crystal Structure Of Pyrococcus Horikoshii Kynurenine
Aminotransferase In Complex With Plp
pdb|3AOW|A Chain A, Crystal Structure Of Pyrococcus Horikoshii Kynurenine
Aminotransferase In Complex With Akg
pdb|3AOW|C Chain C, Crystal Structure Of Pyrococcus Horikoshii Kynurenine
Aminotransferase In Complex With Akg
pdb|3ATH|A Chain A, Crystal Structure Of Pyrococcus Horikoshii Kynurenine
Aminotransferase In Complex With Four Akgs As Substrates
And Allosteric Effectors
pdb|3ATH|C Chain C, Crystal Structure Of Pyrococcus Horikoshii Kynurenine
Aminotransferase In Complex With Four Akgs As Substrates
And Allosteric Effectors
pdb|3AV7|A Chain A, Crystal Structure Of Pyrococcus Horikoshii Kynurenine
Aminotransferase In Complex With Pmp, Kyn As Substrates
And Kya As Products
pdb|3AV7|C Chain C, Crystal Structure Of Pyrococcus Horikoshii Kynurenine
Aminotransferase In Complex With Pmp, Kyn As Substrates
And Kya As Products
Length = 448
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 89/392 (22%), Positives = 169/392 (43%), Gaps = 58/392 (14%)
Query: 37 VISLAMGDPTVHSCFXXXXXXXXXXXXXXXSEKFNGYAPTAGLPLTRRAIAEYLSRDLPY 96
+ISLA G P + ++K Y T G R + ++L + Y
Sbjct: 78 IISLAGGLPNPKTFPKEIIRDILVEIMEKYADKALQYGTTKGFTPLRETLMKWLGKR--Y 135
Query: 97 KLTP-NDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSA--AFRHIEVRHFDL 153
++ ND+ +TSG QA+D+ + PG +++ P + L+A AF E ++ +
Sbjct: 136 GISQDNDIMITSGSQQALDLIGRVFLNPGDIVVVEAPTY----LAALQAFNFYEPQYIQI 191
Query: 154 -LPDKGWEVD-----LDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKT 207
L D+G +V+ L +++S + V + NP G + + L E A++
Sbjct: 192 PLDDEGMKVEILEEKLKELKSQGKKVKVVYTVPTFQNPAGVTMNEDRRKYLLELASEYDF 251
Query: 208 LVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFR 267
+V+ D+ YG L + P + + ++ LG+ SK + PG+R+GW V DP G+ R
Sbjct: 252 IVVEDDPYGELRYSGNPEKKIKALDNEGRVIYLGTFSK-ILAPGFRIGWMV-GDP-GIIR 308
Query: 268 KPKVVERMK-------------KYFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQ 314
K ++ ++ +Y D +++ +P I + F+K + + +
Sbjct: 309 KMEIAKQSTDLCTNVFGQVVAWRYVD-----GGYLEKHIPEIRK-----FYKPRRDAMLE 358
Query: 315 SVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLXXXXXXXXFCFKLAKEESVIILPG 374
+++ + +P KPEG M + + L + + A ++ V +PG
Sbjct: 359 ALE------EFMPEGVKWTKPEGGMFIWVTLPDGI------DSKKMLERAIKKGVAYVPG 406
Query: 375 TAV----GLKNWLRVTFA-VDPYSLEECLDRI 401
A +KN +R+ F VD + E + R+
Sbjct: 407 EAFYAHRDVKNTMRLNFTYVDEDKIMEGIKRL 438
>pdb|1X0M|A Chain A, A Human Kynurenine Aminotransferase Ii Homologue From
Pyrococcus Horikoshii Ot3
Length = 403
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 115/247 (46%), Gaps = 18/247 (7%)
Query: 37 VISLAMGDPTVHSCFXXXXXXXXXXXXXXXSEKFNGYAPTAGLPLTRRAIAEYLSRDLPY 96
+ISLA G P + ++K Y T G R + ++L + Y
Sbjct: 33 IISLAGGLPNPKTFPKEIIRDILVEIMEKYADKALQYGTTKGFTPLRETLMKWLGKR--Y 90
Query: 97 KLTP-NDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSA--AFRHIEVRHFDL 153
++ ND+ +TSG QA+D+ + PG +++ P + L+A AF E ++ +
Sbjct: 91 GISQDNDIMITSGSQQALDLIGRVFLNPGDIVVVEAPTY----LAALQAFNFYEPQYIQI 146
Query: 154 -LPDKGWEVD-----LDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKT 207
L D+G +V+ L +++S + V + NP G + + L E A++
Sbjct: 147 PLDDEGMKVEILEEKLKELKSQGKKVKVVYTVPTFQNPAGVTMNEDRRKYLLELASEYDF 206
Query: 208 LVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFR 267
+V+ D+ YG L + P + + ++ LG+ SK + PG+R+GW V DP G+ R
Sbjct: 207 IVVEDDPYGELRYSGNPEKKIKALDNEGRVIYLGTFSK-ILAPGFRIGWMV-GDP-GIIR 263
Query: 268 KPKVVER 274
K ++ ++
Sbjct: 264 KMEIAKQ 270
>pdb|3FDB|A Chain A, Crystal Structure Of A Putative Plp-Dependent
Beta-Cystathionase (Aecd, Dip1736) From Corynebacterium
Diphtheriae At 1.99 A Resolution
Length = 377
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/260 (21%), Positives = 112/260 (43%), Gaps = 19/260 (7%)
Query: 72 GYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPR 131
GY P L +A AE+ + Y+ P +F + + +A+ + + +++P
Sbjct: 55 GYQPDGSL--LSQATAEFYADRYGYQARPEWIFPIPDVVRGLYIAIDHFTPAQSKVIVPT 112
Query: 132 PGFP--IYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNV 189
P +P + LSA R + D ++L D+E ++++ NP NP G V
Sbjct: 113 PAYPPFFHLLSATQRE------GIFIDATGGINLHDVEKGFQAGARSILLCNPYNPLGXV 166
Query: 190 YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPI-LTLGSLSKRWI 248
++ + L +L + A++ V+ DE++ LVF + V GV + + +T+ + S W
Sbjct: 167 FAPEWLNELCDLAHRYDARVLVDEIHAPLVFDGQHTVAAGVSDTAASVCITITAPSXAWN 226
Query: 249 VPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQAAVPSILQQPDEVFFKKT 308
+ G + + F P E ++ ++ D A+ + + F +
Sbjct: 227 IAGLKCAQII-------FSNPSDAEHWQQLSPVIKDGASTLGLIAAEAAYRYGTDFLNQE 279
Query: 309 LNLLKQSVDICYNKI-KEIP 327
+ LK + D ++I K IP
Sbjct: 280 VAYLKNNHDFLLHEIPKRIP 299
>pdb|3F6T|A Chain A, Crystal Structure Of Aspartate Aminotransferase (E.C.
2.6.1.1) (Yp_194538.1) From Lactobacillus Acidophilus
Ncfm At 2.15 A Resolution
pdb|3F6T|B Chain B, Crystal Structure Of Aspartate Aminotransferase (E.C.
2.6.1.1) (Yp_194538.1) From Lactobacillus Acidophilus
Ncfm At 2.15 A Resolution
Length = 533
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 93/221 (42%), Gaps = 28/221 (12%)
Query: 86 IAEYLSRDLPYK----LTPNDVFVTSGCTQAIDVAMALLS-----RPGANILLPRPGFPI 136
I Y ++L YK D+F T G T AI A L+ + G I + P F
Sbjct: 146 IINYFLQELSYKDANLAEQTDLFPTEGGTAAIVYAFHSLAENHLLKKGDKIAINEPIFTP 205
Query: 137 YELSAAFRHIEVRHFDL--LPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQH 194
Y + E+ DL WE++ ++IE L D + AL+++NP NP +
Sbjct: 206 YLRIPELKDYELVEVDLHSYEKNDWEIEPNEIEKLKDPSIKALIVVNPTNPTSKEFDTNA 265
Query: 195 LQKLAETANKL-KTLVIADEVYGHLVFGDKPFVP-MGVFGSTVPILT--LGSLSKRWIVP 250
L + + K K +I+DEVYG FVP S VP T + S S +
Sbjct: 266 LNAIKQAVEKNPKLXIISDEVYG-------AFVPNFKSIYSVVPYNTXLVYSYSXLFGCT 318
Query: 251 GWRLGWF------VTTDPCGMFRKPKVVERMKKYFDILGDP 285
GWRLG V D K ++ + K+Y ++ DP
Sbjct: 319 GWRLGVIALNEKNVFDDNIAHLDKVELRQLHKRYSSVVLDP 359
>pdb|3H14|A Chain A, Crystal Structure Of A Putative Aminotransferase From
Silicibacter Pomeroyi
Length = 391
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 78/351 (22%), Positives = 132/351 (37%), Gaps = 41/351 (11%)
Query: 72 GYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPR 131
GY GLP R+ IA L P V +T G + +A L G + +
Sbjct: 63 GYTVALGLPALRQRIARLYGEWYGVDLDPGRVVITPGSSGGFLLAFTALFDSGDRVGIGA 122
Query: 132 PGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDI---------ESLADQNTVALVIINP 182
PG+P Y R I +R L+P VDL A + L + +P
Sbjct: 123 PGYPSY------RQI-LRALGLVP-----VDLPTAPENRLQPVPADFAGLDLAGLXVASP 170
Query: 183 GNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGS 242
NP G + L E A I+DE+Y + + K + + T + S
Sbjct: 171 ANPTGTXLDHAAXGALIEAAQAQGASFISDEIYHGIEYEAKAVTALEL---TDECYVINS 227
Query: 243 LSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQAAVPSILQQPDE 302
SK + GWR+GW V + + +VVER+ + I A+ + A
Sbjct: 228 FSKYFSXTGWRVGWXVVPE-----DQVRVVERIAQNXFICAPHASQVAALAALDCDAE-- 280
Query: 303 VFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLXXXXXXXXFCFK 362
+ L++ K + + ++ + P+G+ V ++ F +
Sbjct: 281 --LQANLDVYKANRKLXLERLPKAGFTRI-APPDGAFYVYADVS----DLTDDSRAFAAE 333
Query: 363 LAKEESVIILPGTAVGLKNW---LRVTFAVDPYSLEECLDRIKSFYQRHAK 410
+ ++ V + PG + LR ++A +EE LDR+++F Q +
Sbjct: 334 ILEKAGVAVTPGLDFDPERGAGTLRFSYARATADIEEGLDRLEAFXQARGE 384
>pdb|3B1C|A Chain A, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus: Internal Aldimine Form
pdb|3B1C|B Chain B, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus: Internal Aldimine Form
pdb|3B1C|C Chain C, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus: Internal Aldimine Form
pdb|3B1C|D Chain D, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus: Internal Aldimine Form
pdb|3B1D|A Chain A, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus In Complex With L-Serine: External Aldimine
Form
pdb|3B1D|B Chain B, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus In Complex With L-Serine: External Aldimine
Form
pdb|3B1D|C Chain C, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus In Complex With L-Serine: External Aldimine
Form
pdb|3B1D|D Chain D, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus In Complex With L-Serine: External Aldimine
Form
pdb|3B1E|A Chain A, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus In Complex With L-Serine: Alpha-Aminoacrylate
Form
pdb|3B1E|B Chain B, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus In Complex With L-Serine: Alpha-Aminoacrylate
Form
pdb|3B1E|C Chain C, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus In Complex With L-Serine: Alpha-Aminoacrylate
Form
pdb|3B1E|D Chain D, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus In Complex With L-Serine: Alpha-Aminoacrylate
Form
Length = 392
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/198 (21%), Positives = 91/198 (45%), Gaps = 12/198 (6%)
Query: 84 RAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAF 143
+A+ ++ + Y D+ G AI +A+ ++ G +L+ P +P + S
Sbjct: 73 QAVLDWEKSEHQYSFDKEDIVFVEGVVPAISIAIQAFTKEGEAVLINSPVYPPFARSVRL 132
Query: 144 RHIEVRHFDLLPDKG-WEVDLDDIESLADQNTVALVII-NPGNPCGNVYSYQHLQKLAET 201
+ ++ L + G +++D + +E+ +N V L ++ NP NP G V+ + L+++
Sbjct: 133 NNRKLVSNSLKEENGLFQIDFEQLENDIVENDVKLYLLCNPHNPGGRVWEREVLEQIGHL 192
Query: 202 ANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVP-----ILTLGSLSKRWIVPGWRLGW 256
K ++++DE++ L V F + P L L S +K + + G + +
Sbjct: 193 CQKHHVILVSDEIHQDLTLFGHEHVS---FNTVSPDFKDFALVLSSATKTFNIAGTKNSY 249
Query: 257 FVTTDP--CGMFRKPKVV 272
+ +P C F+ ++V
Sbjct: 250 AIIENPTLCAQFKHQQLV 267
>pdb|3PIU|A Chain A, High-Resolution Structure Of Native Malus Domestica Acc
Synthase
Length = 410
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 76/343 (22%), Positives = 148/343 (43%), Gaps = 23/343 (6%)
Query: 78 GLPLTRRAIAEYLSRDLPYKLT--PNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFP 135
GLP ++A+ ++++ K+T PN + +T+G T A + + L+ PG +L+P P +P
Sbjct: 70 GLPAFKKAMVDFMAEIRGNKVTFDPNHLVLTAGATSANETFIFCLADPGEAVLIPTPYYP 129
Query: 136 IYELSAAFRH-IEVRHFDLLPDKGW---EVDLDDIESLADQNTV---ALVIINPGNPCGN 188
++ +R +E+ G+ E L++ A++ + +++ NP NP G
Sbjct: 130 GFDRDLKWRTGVEIVPIHCTSSNGFQITETALEEAYQEAEKRNLRVKGVLVTNPSNPLGT 189
Query: 189 VYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVP-MGVFGSTV--PILTLGSLSK 245
+ L L +I+DE+Y F F+ M V V + + SLS
Sbjct: 190 TMTRNELYLLLSFVEDKGIHLISDEIYSGTAFSSPSFISVMEVLKDEVWQRVHVVYSLSX 249
Query: 246 RWI-VPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQAAVPSILQQPDEVF 304
+ + +PG+R+G + D + K+ F ++ + +A+ S ++ + +
Sbjct: 250 KDLGLPGFRVGAIYSNDDMVVAAATKMSS-----FGLVSSQTQHLLSAMLSD-KKLTKNY 303
Query: 305 FKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLXXXXXXXXFCFKLA 364
+ LKQ + +++ ISC + G + +L K+
Sbjct: 304 IAENHKRLKQRQKKLVSGLQK-SGISCLNGNAGLFCWVDMRHLLRSNTFEAEMELWKKIV 362
Query: 365 KEESVIILPGTAVGLKN--WLRVTFAVDP-YSLEECLDRIKSF 404
E + I PG++ W RV FA P +L+ + R+K+F
Sbjct: 363 YEVHLNISPGSSCHCTEPGWFRVCFANLPERTLDLAMQRLKAF 405
>pdb|1M7Y|A Chain A, Crystal Structure Of Apple Acc Synthase In Complex With L-
Aminoethoxyvinylglycine
pdb|1M4N|A Chain A, Crystal Structure Of Apple Acc Synthase In Complex With
[2-(Amino-
Oxy)ethyl](5'-Deoxyadenosin-5'-Yl)(Methyl)sulfonium
Length = 435
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 78/349 (22%), Positives = 148/349 (42%), Gaps = 29/349 (8%)
Query: 78 GLPLTRRAIAEYLSRDLPYKLT--PNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFP 135
GLP ++A+ ++++ K+T PN + +T+G T A + + L+ PG +L+P P +P
Sbjct: 87 GLPAFKKAMVDFMAEIRGNKVTFDPNHLVLTAGATSANETFIFCLADPGEAVLIPTPYYP 146
Query: 136 IYELSAAFRH-IEVRHFDLLPDKGW---EVDLDDIESLADQNTV---ALVIINPGNPCGN 188
++ +R +E+ G+ E L++ A++ + +++ NP NP G
Sbjct: 147 GFDRDLKWRTGVEIVPIHCTSSNGFQITETALEEAYQEAEKRNLRVKGVLVTNPSNPLGT 206
Query: 189 VYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVP-MGVF-------GSTV--PIL 238
+ L L +I+DE+Y F F+ M V S V +
Sbjct: 207 TMTRNELYLLLSFVEDKGIHLISDEIYSGTAFSSPSFISVMEVLKDRNCDENSEVWQRVH 266
Query: 239 TLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQAAVPSILQ 298
+ SLSK +PG+R+G + D + K+ F ++ + +A+ S +
Sbjct: 267 VVYSLSKDLGLPGFRVGAIYSNDDMVVAAATKMSS-----FGLVSSQTQHLLSAMLSD-K 320
Query: 299 QPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLXXXXXXXX 358
+ + + + LKQ + +++ ISC + G + +L
Sbjct: 321 KLTKNYIAENHKRLKQRQKKLVSGLQK-SGISCLNGNAGLFCWVDMRHLLRSNTFEAEME 379
Query: 359 FCFKLAKEESVIILPGTAVGLKN--WLRVTFAVDP-YSLEECLDRIKSF 404
K+ E + I PG++ W RV FA P +L+ + R+K+F
Sbjct: 380 LWKKIVYEVHLNISPGSSCHCTEPGWFRVCFANLPERTLDLAMQRLKAF 428
>pdb|1YNU|A Chain A, Crystal Structure Of Apple Acc Synthase In Complex With
L-Vinylglycine
Length = 473
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 78/349 (22%), Positives = 148/349 (42%), Gaps = 29/349 (8%)
Query: 78 GLPLTRRAIAEYLSRDLPYKLT--PNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFP 135
GLP ++A+ ++++ K+T PN + +T+G T A + + L+ PG +L+P P +P
Sbjct: 87 GLPAFKKAMVDFMAEIRGNKVTFDPNHLVLTAGATSANETFIFCLADPGEAVLIPTPYYP 146
Query: 136 IYELSAAFRH-IEVRHFDLLPDKGW---EVDLDDIESLADQNTV---ALVIINPGNPCGN 188
++ +R +E+ G+ E L++ A++ + +++ NP NP G
Sbjct: 147 GFDRDLKWRTGVEIVPIHCTSSNGFQITETALEEAYQEAEKRNLRVKGVLVTNPSNPLGT 206
Query: 189 VYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVP-MGVF-------GSTV--PIL 238
+ L L +I+DE+Y F F+ M V S V +
Sbjct: 207 TMTRNELYLLLSFVEDKGIHLISDEIYSGTAFSSPSFISVMEVLKDRNCDENSEVWQRVH 266
Query: 239 TLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQAAVPSILQ 298
+ SLSK +PG+R+G + D + K+ F ++ + +A+ S +
Sbjct: 267 VVYSLSKDLGLPGFRVGAIYSNDDMVVAAATKMSS-----FGLVSSQTQHLLSAMLSD-K 320
Query: 299 QPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLXXXXXXXX 358
+ + + + LKQ + +++ ISC + G + +L
Sbjct: 321 KLTKNYIAENHKRLKQRQKKLVSGLQK-SGISCLNGNAGLFCWVDMRHLLRSNTFEAEME 379
Query: 359 FCFKLAKEESVIILPGTAVGLKN--WLRVTFAVDP-YSLEECLDRIKSF 404
K+ E + I PG++ W RV FA P +L+ + R+K+F
Sbjct: 380 LWKKIVYEVHLNISPGSSCHCTEPGWFRVCFANLPERTLDLAMQRLKAF 428
>pdb|1B8G|A Chain A, 1-aminocyclopropane-1-carboxylate Synthase
pdb|1B8G|B Chain B, 1-aminocyclopropane-1-carboxylate Synthase
Length = 429
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 78/349 (22%), Positives = 148/349 (42%), Gaps = 29/349 (8%)
Query: 78 GLPLTRRAIAEYLSRDLPYKLT--PNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFP 135
GLP ++A+ ++++ K+T PN + +T+G T A + + L+ PG +L+P P +P
Sbjct: 85 GLPAFKKAMVDFMAEIRGNKVTFDPNHLVLTAGATSANETFIFCLADPGEAVLIPTPYYP 144
Query: 136 IYELSAAFRH-IEVRHFDLLPDKGW---EVDLDDIESLADQNTV---ALVIINPGNPCGN 188
++ +R +E+ G+ E L++ A++ + +++ NP NP G
Sbjct: 145 GFDRDLKWRTGVEIVPIHCTSSNGFQITETALEEAYQEAEKRNLRVKGVLVTNPSNPLGT 204
Query: 189 VYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVP-MGVF-------GSTV--PIL 238
+ L L +I+DE+Y F F+ M V S V +
Sbjct: 205 TMTRNELYLLLSFVEDKGIHLISDEIYSGTAFSSPSFISVMEVLKDRNCDENSEVWQRVH 264
Query: 239 TLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQAAVPSILQ 298
+ SLSK +PG+R+G + D + K+ F ++ + +A+ S +
Sbjct: 265 VVYSLSKDLGLPGFRVGAIYSNDDMVVAAATKMSS-----FGLVSSQTQHLLSAMLSD-K 318
Query: 299 QPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLXXXXXXXX 358
+ + + + LKQ + +++ ISC + G + +L
Sbjct: 319 KLTKNYIAENHKRLKQRQKKLVSGLQK-SGISCLNGNAGLFCWVDMRHLLRSNTFEAEME 377
Query: 359 FCFKLAKEESVIILPGTAVGLKN--WLRVTFAVDP-YSLEECLDRIKSF 404
K+ E + I PG++ W RV FA P +L+ + R+K+F
Sbjct: 378 LWKKIVYEVHLNISPGSSCHCTEPGWFRVCFANLPERTLDLAMQRLKAF 426
>pdb|1IAX|A Chain A, Crystal Structure Of Acc Synthase Complexed With Plp
pdb|1IAX|B Chain B, Crystal Structure Of Acc Synthase Complexed With Plp
pdb|1IAY|A Chain A, Crystal Structure Of Acc Synthase Complexed With Cofactor
Plp And Inhibitor Avg
Length = 428
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 75/350 (21%), Positives = 136/350 (38%), Gaps = 33/350 (9%)
Query: 78 GLPLTRRAIAEYL--SRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFP 135
GLP R+AIA+++ +R + P V + G T A + + L+ PG L+P P +P
Sbjct: 84 GLPEFRKAIAKFMEKTRGGRVRFDPERVVMAGGATGANETIIFCLADPGDAFLVPSPYYP 143
Query: 136 IYELSAAFR--------HIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCG 187
+ +R H E + + K + ++ + ++ L++ NP NP G
Sbjct: 144 AFNRDLRWRTGVQLIPIHCESSNNFKITSKAVKEAYENAQK-SNIKVKGLILTNPSNPLG 202
Query: 188 NVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMG--------VFGSTVPILT 239
L+ + N+ ++ DE+Y VF FV + + + +
Sbjct: 203 TTLDKDTLKSVLSFTNQHNIHLVCDEIYAATVFDTPQFVSIAEILDEQEMTYCNKDLVHI 262
Query: 240 LGSLSKRWIVPGWRLG--WFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQAAVPSIL 297
+ SLSK +PG+R+G + D RK F ++ + AA+ S
Sbjct: 263 VYSLSKDMGLPGFRVGIIYSFNDDVVNCARK-------MSSFGLVSTQTQYFLAAMLSDE 315
Query: 298 QQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLXXXXXXX 357
+ D + + L K+ + E+ I C G M L
Sbjct: 316 KFVDNFLRESAMRLGKRHKH--FTNGLEVVGIKCLKNNAGLFCWMDLRPLLRESTFDSEM 373
Query: 358 XFCFKLAKEESVIILPGTAVGLKN--WLRVTFA-VDPYSLEECLDRIKSF 404
+ + + + PG++ + W RV FA +D +++ L RI+ F
Sbjct: 374 SLWRVIINDVKLNVSPGSSFECQEPGWFRVCFANMDDGTVDIALARIRRF 423
>pdb|2EGY|A Chain A, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Substrate Free Form), From Thermus
Thermophilus Hb27
pdb|2EGY|B Chain B, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Substrate Free Form), From Thermus
Thermophilus Hb27
pdb|2EGY|C Chain C, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Substrate Free Form), From Thermus
Thermophilus Hb27
pdb|2EGY|D Chain D, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Substrate Free Form), From Thermus
Thermophilus Hb27
pdb|2ZP7|C Chain C, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Leucine Complex), From Thermus
Thermophilus Hb27
pdb|2ZP7|D Chain D, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Leucine Complex), From Thermus
Thermophilus Hb27
pdb|2ZP7|F Chain F, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Leucine Complex), From Thermus
Thermophilus Hb27
pdb|3CBF|A Chain A, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase, From Thermus Thermophilus Hb27
pdb|3CBF|B Chain B, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase, From Thermus Thermophilus Hb27
pdb|2Z1Y|A Chain A, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Complexed With
N-(5'-Phosphopyridoxyl)-L-Leucine), From Thermus
Thermophilus Hb27
pdb|2Z1Y|B Chain B, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Complexed With
N-(5'-Phosphopyridoxyl)-L-Leucine), From Thermus
Thermophilus Hb27
pdb|2ZP7|A Chain A, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Leucine Complex), From Thermus
Thermophilus Hb27
pdb|2ZP7|B Chain B, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Leucine Complex), From Thermus
Thermophilus Hb27
pdb|2ZP7|E Chain E, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Leucine Complex), From Thermus
Thermophilus Hb27
pdb|2ZYJ|A Chain A, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Complexed With
N-(5'-Phosphopyridoxyl)-L-Glutamate), From Thermus
Thermophilus Hb27
pdb|2ZYJ|B Chain B, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Complexed With
N-(5'-Phosphopyridoxyl)-L-Glutamate), From Thermus
Thermophilus Hb27
Length = 397
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 76/343 (22%), Positives = 147/343 (42%), Gaps = 40/343 (11%)
Query: 73 YAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRP 132
Y+PT G R +AE++ + P +V +T+G QA+D+ + G+ +LL P
Sbjct: 70 YSPTEGYAPLRAFVAEWIG------VRPEEVLITTGSQQALDLVGKVFLDEGSPVLLEAP 123
Query: 133 GFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPG--NPCGNVY 190
+ AFR ++ F +P DLD +E + + + + P NP G +
Sbjct: 124 SY--MGAIQAFR-LQGPRFLTVPAGEEGPDLDALEEVLKRERPRFLYLIPSFQNPTGGLT 180
Query: 191 SYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTV---PILTLGSLSKRW 247
++L + + +V+ D+ Y L FG+ + ++ LGS SK
Sbjct: 181 PLPARKRLLQMVMERGLVVVEDDAYRELYFGEARLPSLFELAREAGYPGVIYLGSFSK-V 239
Query: 248 IVPGWRLGWFVTTDPCGMFRKPKVVERM---KKYFDILGDPATFIQAAVPSILQQPDEVF 304
+ PG R+ + V P+ ++++ K+ D+ Q V +L++
Sbjct: 240 LSPGLRVAFAVA--------HPEALQKLVQAKQGADL--HTPMLNQMLVHELLKEGFSER 289
Query: 305 FKKTLNLLKQSVDICYNKI-KEIPCISCPHKPEGSMAVMLKLNLSLLXXXXXXXXFCFKL 363
++ + ++ + + +E+P +P+G M V ++L L F+
Sbjct: 290 LERVRRVYREKAQAMLHALDREVPKEVRYTRPKGGMFVWMELPKGL------SAEGLFRR 343
Query: 364 AKEESVIILPGTAV----GLKNWLRVTFA-VDPYSLEECLDRI 401
A EE+V +PG G +N LR+++A +D + E + R+
Sbjct: 344 ALEENVAFVPGGPFFANGGGENTLRLSYATLDREGIAEGVRRL 386
>pdb|1LKC|A Chain A, Crystal Structure Of L-Threonine-O-3-Phosphate
Decarboxylase From Salmonella Enterica
pdb|1LC5|A Chain A, Crystal Structure Of L-Threonine-O-3-Phosphate
Decarboxylase From S. Enterica In Its Apo State
pdb|1LC7|A Chain A, Crystal Structure Of L-Threonine-O-3-Phosphate
Decarboxylase From S. Enterica Complexed With A
Substrate
pdb|1LC8|A Chain A, Crystal Structure Of L-Threonine-O-3-Phosphate
Decarboxylase From S. Enterica Complexed With Its
Reaction Intermediate
Length = 364
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 100/229 (43%), Gaps = 17/229 (7%)
Query: 103 VFVTSGCTQAI-DVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEV 161
+ +G T++I VA L R ++ PGF Y + A E+R + L GW++
Sbjct: 79 ILAGNGETESIFTVASGLKPR---RAMIVTPGFAEYGRALAQSGCEIRRWSLREADGWQL 135
Query: 162 DLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFG 221
+E+L + L + P NP G + LQ +A+ L +I DE + +
Sbjct: 136 TDAILEALT-PDLDCLFLCTPNNPTGLLPERPLLQAIADRCKSLNINLILDEAFIDFIPH 194
Query: 222 DKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDI 281
+ F+P I L SL+K + +PG RLG+ V +D M R + ++M +
Sbjct: 195 ETGFIP--ALKDNPHIWVLRSLTKFYAIPGLRLGYLVNSDDAAMARMRR--QQMPWSVNA 250
Query: 282 LGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCIS 330
L AA+ + D + + T + L++ Y + ++P ++
Sbjct: 251 L--------AALAGEVALQDSAWQQATWHWLREEGARFYQALCQLPLLT 291
>pdb|4FL0|A Chain A, Crystal Structure Of Ald1 From Arabidopsis Thaliana
pdb|4FL0|B Chain B, Crystal Structure Of Ald1 From Arabidopsis Thaliana
Length = 456
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 89/238 (37%), Gaps = 20/238 (8%)
Query: 36 KVISLAMGDPTVHSCFXXXXXXXXXXXXXXXSEKFNGYAPTAGLPLTRRAIAEYLSRDLP 95
++ISL GD T E + GY G R+AIAE RDL
Sbjct: 71 QLISLGTGDTTEPIPEQITSHMSNFAHGLSTVEGYRGYGLEQGNKTLRKAIAETFYRDLH 130
Query: 96 YKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAF------------ 143
K N+VFV+ G I + LL I + P FP Y S+
Sbjct: 131 VK--SNEVFVSDGAQSDIS-RLQLLLGSNVTIAVQDPTFPAYIDSSVIIGQTGHFHEKTK 187
Query: 144 RHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETAN 203
++ V + P+ + DL T + +P NP G V S + L +L + A
Sbjct: 188 KYQNVVYMPCGPNNSFFPDL-----AMTPRTDVIFFCSPNNPTGYVASRKQLHQLVDFAK 242
Query: 204 KLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTD 261
+++I D Y + P + G+ + + S SK G RLGW + D
Sbjct: 243 TNGSIIIFDSAYAAFIEDGSPRSIYEIPGAREVAIEVSSFSKFAGFTGVRLGWSIIPD 300
>pdb|2Z1Z|A Chain A, Crystal Structure Of Ll-diaminopimelate Aminotransferase
From Arabidopsis Thaliana Complexed With L-malate Ion
pdb|2Z1Z|B Chain B, Crystal Structure Of Ll-diaminopimelate Aminotransferase
From Arabidopsis Thaliana Complexed With L-malate Ion
pdb|3EI5|A Chain A, Crystal Structure Of Ll-Diaminopimelate Aminotransferase
From Arabidopsis Thaliana Complexed With Plp-Glu: An
External Aldimine Mimic
pdb|3EI5|B Chain B, Crystal Structure Of Ll-Diaminopimelate Aminotransferase
From Arabidopsis Thaliana Complexed With Plp-Glu: An
External Aldimine Mimic
pdb|3EI6|A Chain A, Crystal Structure Of Ll-Diaminopimelate Aminotransferase
From Arabidopsis Thaliana Complexed With Plp-Dap: An
External Aldimine Mimic
pdb|3EI6|B Chain B, Crystal Structure Of Ll-Diaminopimelate Aminotransferase
From Arabidopsis Thaliana Complexed With Plp-Dap: An
External Aldimine Mimic
pdb|3EI7|A Chain A, Crystal Structure Of Apo-Ll-Diaminopimelate
Aminotransferase From Arabidopsis Thaliana (No Plp)
pdb|3EI7|B Chain B, Crystal Structure Of Apo-Ll-Diaminopimelate
Aminotransferase From Arabidopsis Thaliana (No Plp)
Length = 432
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/237 (23%), Positives = 90/237 (37%), Gaps = 20/237 (8%)
Query: 34 EKKVISLAMGDPTVHSCFXXXXXXXXXXXXXXXSEKFNGYAPTAGLPLTRRAIAEYLSRD 93
+ +VISL +GD T E ++GY G R AIA+
Sbjct: 55 DAQVISLGIGDTTEPIPEVITSAMAKKAHELSTIEGYSGYGAEQGAKPLRAAIAKTFYGG 114
Query: 94 LPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAF---------- 143
L + +DVFV+ G I + ++ I + P +P Y S+
Sbjct: 115 L--GIGDDDVFVSDGAKCDIS-RLQVMFGSNVTIAVQDPSYPAYVDSSVIMGQTGQFNTD 171
Query: 144 --RHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAET 201
++ + + P+ G+ DL + T + +P NP G + + L +L E
Sbjct: 172 VQKYGNIEYMRCTPENGFFPDLSTV-----GRTDIIFFCSPNNPTGAAATREQLTQLVEF 226
Query: 202 ANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFV 258
A K ++++ D Y + D P + G+ + S SK G RLGW V
Sbjct: 227 AKKNGSIIVYDSAYAMYMSDDNPRSIFEIPGAEEVAMETASFSKYAGFTGVRLGWTV 283
>pdb|3DZZ|A Chain A, Crystal Structure Of A Putative Plp-Dependent
Aminotransferase (Lbul_1103) From Lactobacillus
Delbrueckii Subsp. At 1.61 A Resolution
pdb|3DZZ|B Chain B, Crystal Structure Of A Putative Plp-Dependent
Aminotransferase (Lbul_1103) From Lactobacillus
Delbrueckii Subsp. At 1.61 A Resolution
Length = 391
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 90/208 (43%), Gaps = 19/208 (9%)
Query: 84 RAIAEYLSRDLPYKLTPNDVFV--TSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSA 141
+A+A++ ++ ++ P + + SG AI + + PG IL+ P + +
Sbjct: 69 KAVADW--EEIEHRARPKEDWCVFASGVVPAISAXVRQFTSPGDQILVQEPVYNXFYSVI 126
Query: 142 AFRHIEVRHFDLL-PDKGWEVDLDDIES-LADQNTVALVIINPGNPCGNVYSYQHLQKLA 199
V DL+ + + V+ D+E LA + V NP NP G +S + ++++A
Sbjct: 127 EGNGRRVISSDLIYENSKYSVNWADLEEKLATPSVRXXVFCNPHNPIGYAWSEEEVKRIA 186
Query: 200 ETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIV----PGWRLG 255
E K + L+I+DE++G LV D+ P T+ +K W+V P
Sbjct: 187 ELCAKHQVLLISDEIHGDLVLTDEDITPA---------FTVDWDAKNWVVSLISPSXTFN 237
Query: 256 WFVTTDPCGMFRKPKVVERMKKYFDILG 283
C + P + R ++ F + G
Sbjct: 238 LAALHAACAIIPNPDLRARAEESFFLAG 265
>pdb|3EIA|A Chain A, Crystal Structure Of K270q Variant Of Ll-Diaminopimelate
Aminotransferase From Arabidopsis Thaliana Complexed
With L-Glu: External Aldimine Form
pdb|3EIA|B Chain B, Crystal Structure Of K270q Variant Of Ll-Diaminopimelate
Aminotransferase From Arabidopsis Thaliana Complexed
With L-Glu: External Aldimine Form
Length = 432
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/237 (22%), Positives = 90/237 (37%), Gaps = 20/237 (8%)
Query: 34 EKKVISLAMGDPTVHSCFXXXXXXXXXXXXXXXSEKFNGYAPTAGLPLTRRAIAEYLSRD 93
+ +VISL +GD T E ++GY G R AIA+
Sbjct: 55 DAQVISLGIGDTTEPIPEVITSAMAKKAHELSTIEGYSGYGAEQGAKPLRAAIAKTFYGG 114
Query: 94 LPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAF---------- 143
L + +DVFV+ G I + ++ I + P +P Y S+
Sbjct: 115 L--GIGDDDVFVSDGAKCDIS-RLQVMFGSNVTIAVQDPSYPAYVDSSVIMGQTGQFNTD 171
Query: 144 --RHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAET 201
++ + + P+ G+ DL + T + +P NP G + + L +L E
Sbjct: 172 VQKYGNIEYMRCTPENGFFPDLSTV-----GRTDIIFFCSPNNPTGAAATREQLTQLVEF 226
Query: 202 ANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFV 258
A K ++++ D Y + D P + G+ + S S+ G RLGW V
Sbjct: 227 AKKNGSIIVYDSAYAMYMSDDNPRSIFEIPGAEEVAMETASFSQYAGFTGVRLGWTV 283
>pdb|3EI8|A Chain A, Crystal Structure Of K270n Variant Of Ll-Diaminopimelate
Aminotransferase From Arabidopsis Thaliana Complexed
With Ll-Dap: External Aldimine Form
pdb|3EI8|B Chain B, Crystal Structure Of K270n Variant Of Ll-Diaminopimelate
Aminotransferase From Arabidopsis Thaliana Complexed
With Ll-Dap: External Aldimine Form
pdb|3EI9|A Chain A, Crystal Structure Of K270n Variant Of Ll-diaminopimelate
Aminotransferase From Arabidopsis Thaliana Complexed
With L-glu: External Aldimine Form
pdb|3EI9|B Chain B, Crystal Structure Of K270n Variant Of Ll-diaminopimelate
Aminotransferase From Arabidopsis Thaliana Complexed
With L-glu: External Aldimine Form
pdb|3EIB|A Chain A, Crystal Structure Of K270n Variant Of Ll-Diaminopimelate
Aminotransferase From Arabidopsis Thaliana
pdb|3EIB|B Chain B, Crystal Structure Of K270n Variant Of Ll-Diaminopimelate
Aminotransferase From Arabidopsis Thaliana
Length = 432
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/237 (22%), Positives = 89/237 (37%), Gaps = 20/237 (8%)
Query: 34 EKKVISLAMGDPTVHSCFXXXXXXXXXXXXXXXSEKFNGYAPTAGLPLTRRAIAEYLSRD 93
+ +VISL +GD T E ++GY G R AIA+
Sbjct: 55 DAQVISLGIGDTTEPIPEVITSAMAKKAHELSTIEGYSGYGAEQGAKPLRAAIAKTFYGG 114
Query: 94 LPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAF---------- 143
L + +DVFV+ G I + ++ I + P +P Y S+
Sbjct: 115 L--GIGDDDVFVSDGAKCDIS-RLQVMFGSNVTIAVQDPSYPAYVDSSVIMGQTGQFNTD 171
Query: 144 --RHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAET 201
++ + + P+ G+ DL + T + +P NP G + + L +L E
Sbjct: 172 VQKYGNIEYMRCTPENGFFPDLSTV-----GRTDIIFFCSPNNPTGAAATREQLTQLVEF 226
Query: 202 ANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFV 258
A K ++++ D Y + D P + G+ + S S G RLGW V
Sbjct: 227 AKKNGSIIVYDSAYAMYMSDDNPRSIFEIPGAEEVAMETASFSNYAGFTGVRLGWTV 283
>pdb|3JTX|A Chain A, Crystal Structure Of Aminotransferase (np_283882.1) From
Neisseria Meningitidis Z2491 At 1.91 A Resolution
pdb|3JTX|B Chain B, Crystal Structure Of Aminotransferase (np_283882.1) From
Neisseria Meningitidis Z2491 At 1.91 A Resolution
Length = 396
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 88/201 (43%), Gaps = 14/201 (6%)
Query: 73 YAPTAGLPLTRRAIAEYLSR--DLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGAN---- 126
Y TAGLP R+A A +L R D N++ G +A+ + + P ++
Sbjct: 62 YPLTAGLPELRQACANWLKRRYDGLTVDADNEILPVLGSREALFSFVQTVLNPVSDGIKP 121
Query: 127 -ILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNP 185
I+ P P + IYE + E+ HF P + D I + T + + +P NP
Sbjct: 122 AIVSPNPFYQIYEGATLLGGGEI-HFANCPAPSFNPDWRSISEEVWKRTKLVFVCSPNNP 180
Query: 186 CGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVF-GDKPF----VPMGVFGSTVPILTL 240
G+V +++ + +K ++ +DE Y + F G+KP + S +L
Sbjct: 181 SGSVLDLDGWKEVFDLQDKYGFIIASDECYSEIYFDGNKPLGCLQAAAQLGRSRQKLLXF 240
Query: 241 GSLSKRWIVPGWRLGWFVTTD 261
SLS R VPG R G FV D
Sbjct: 241 TSLSXRSNVPGLRSG-FVAGD 260
>pdb|4DGT|A Chain A, Crystal Structure Of Plp-Bound Putative Aminotransferase
From Clostridium Difficile 630 Crystallized With
Magnesium Formate
pdb|4DGT|B Chain B, Crystal Structure Of Plp-Bound Putative Aminotransferase
From Clostridium Difficile 630 Crystallized With
Magnesium Formate
pdb|4DQ6|A Chain A, Crystal Structure Of Plp-Bound Putative Aminotransferase
From Clostridium Difficile 630
pdb|4DQ6|B Chain B, Crystal Structure Of Plp-Bound Putative Aminotransferase
From Clostridium Difficile 630
Length = 391
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 68/328 (20%), Positives = 137/328 (41%), Gaps = 19/328 (5%)
Query: 83 RRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYE--LS 140
+I +L R +K+ + + G AI + + L++ I++ P + + +
Sbjct: 73 NESIVNWLYRRHNWKIKSEWLIYSPGVIPAISLLINELTKANDKIMIQEPVYSPFNSVVK 132
Query: 141 AAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAE 200
R + + L + + +D +DIE+ ++ ++ NP NP G V++ L+KL +
Sbjct: 133 NNNRELIISPLQKLENGNYIMDYEDIENKI-KDVKLFILCNPHNPVGRVWTKDELKKLGD 191
Query: 201 TANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSL--SKRWIVPGWRLGWFV 258
K +I+DE++ ++ +PM T+ + +K + + G + + V
Sbjct: 192 ICLKHNVKIISDEIHSDIILKKHKHIPMASISKEFEKNTITCMAPTKTFNIAGLQSSYVV 251
Query: 259 TTDPCGMFRKPKVVERMKKYFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDI 318
D + K+++ DI + + A S E + + L L+ ++D
Sbjct: 252 LPDE----KDYKLLDDAFTRIDIKRNNCFSLVATEASY--NNGESWLESFLEYLESNIDF 305
Query: 319 CYNKIKE-IPCISCPHKPEGSMAVMLKLNLSLLXXXXXXXXFCFKLAKEESVIILPGTAV 377
I E +P + KPEG+ +L ++ S L L ++ V + G +
Sbjct: 306 AIKYINENMPKLKV-RKPEGTY--LLWVDFSALGLSDEELESI--LVQKGKVALNQGNSF 360
Query: 378 GL--KNWLRVTFAVDPYSLEECLDRIKS 403
G+ + R+ A LEE L RIK+
Sbjct: 361 GIGGSGYQRINLACPRSMLEEALIRIKN 388
>pdb|2Z20|A Chain A, Crystal Structure Of Ll-diaminopimelate Aminotransferase
From Arabidopsis Thaliana
pdb|2Z20|B Chain B, Crystal Structure Of Ll-diaminopimelate Aminotransferase
From Arabidopsis Thaliana
Length = 432
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 89/239 (37%), Gaps = 24/239 (10%)
Query: 34 EKKVISLAMGDPTVHSCFXXXXXXXXXXXXXXXSEKFNGYAPTAGLPLTRRAIAEYLSRD 93
+ +VISL +GD T E ++GY G R AIA+
Sbjct: 55 DAQVISLGIGDTTEPIPEVITSAXAKKAHELSTIEGYSGYGAEQGAKPLRAAIAKTFYGG 114
Query: 94 LPYKLTPNDVFVTSGCTQAIDVAMALLSRPGAN--ILLPRPGFPIYELSAAF-------- 143
L + +DVFV+ G I G+N I + P +P Y S+
Sbjct: 115 L--GIGDDDVFVSDGAKCDISRLQVXF---GSNVTIAVQDPSYPAYVDSSVIXGQTGQFN 169
Query: 144 ----RHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLA 199
++ + + P+ G+ DL + T + +P NP G + + L +L
Sbjct: 170 TDVQKYGNIEYXRCTPENGFFPDLSTV-----GRTDIIFFCSPNNPTGAAATREQLTQLV 224
Query: 200 ETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFV 258
E A K ++++ D Y D P + G+ S SK G RLGW V
Sbjct: 225 EFAKKNGSIIVYDSAYAXYXSDDNPRSIFEIPGAEEVAXETASFSKYAGFTGVRLGWTV 283
>pdb|3L8A|A Chain A, Crystal Structure Of Metc From Streptococcus Mutans
pdb|3L8A|B Chain B, Crystal Structure Of Metc From Streptococcus Mutans
Length = 421
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 67/338 (19%), Positives = 134/338 (39%), Gaps = 33/338 (9%)
Query: 84 RAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAF 143
+A+ ++ ++ Y + D+ G AI +A+ S G +L+ P + Y +
Sbjct: 103 QAVIDWERKEHDYAVVKEDILFIDGVVPAISIALQAFSEKGDAVLINSPVY--YPFARTI 160
Query: 144 R---HIEVRHFDLLPDKGWEVDLDDIE-SLADQNTVALVIINPGNPCGNVYSYQHLQKLA 199
R H V + + + +E+D + +E + D N ++ +P NP G V+ L K+A
Sbjct: 161 RLNDHRLVENSLQIINGRFEIDFEQLEKDIIDNNVKIYLLCSPHNPGGRVWDNDDLIKIA 220
Query: 200 ETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILT--LGSLSKRWIVPGWRLGWF 257
E K ++++DE++ L + ++ T L S +K + + G + +
Sbjct: 221 ELCKKHGVILVSDEIHQDLALFGNTHHSLNTLDASYKDFTIILSSATKTFNIAGTKNSFA 280
Query: 258 VTTDPCGMFRKPKVVERMKKYFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVD 317
+ + + R +Y + + Q VP++ + F+ L++
Sbjct: 281 IIQNES--------LRRKFQYRQLANN-----QHEVPTVGMIATQAAFQYGKPWLEELKT 327
Query: 318 ICYNKIK------EIPCISCPHKPEGSMAVMLKLNLSLLXXXXXXXXFCFKLAKEESVII 371
+ IK E +PEG+ V L + + KL E V++
Sbjct: 328 VIEGNIKLVIKELEAKTKIKVMEPEGTYLVWLDFSAYAI----AQPQLSEKLQNEAKVVL 383
Query: 372 LPGTAVGL--KNWLRVTFAVDPYSLEECLDRIKSFYQR 407
G G K + R+ A +++E L RI S + +
Sbjct: 384 NDGAHFGKEGKYFARLNVATPKNTVQEALSRIISVFGK 421
>pdb|3FTB|A Chain A, The Crystal Structure Of The Histidinol-Phosphate
Aminotransferase From Clostridium Acetobutylicum
pdb|3FTB|B Chain B, The Crystal Structure Of The Histidinol-Phosphate
Aminotransferase From Clostridium Acetobutylicum
pdb|3FTB|D Chain D, The Crystal Structure Of The Histidinol-Phosphate
Aminotransferase From Clostridium Acetobutylicum
pdb|3FTB|E Chain E, The Crystal Structure Of The Histidinol-Phosphate
Aminotransferase From Clostridium Acetobutylicum
Length = 361
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 94/193 (48%), Gaps = 20/193 (10%)
Query: 72 GYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPR 131
G P ++I YL KL + + +G ++ I+++++L + IL+
Sbjct: 56 GVYPDVNYRRLNKSIENYL------KLKDIGIVLGNGASEIIELSISLFEK----ILIIV 105
Query: 132 PGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCG---N 188
P + YE++A + V F L D+ +D +DI S D + +++I NP NP G N
Sbjct: 106 PSYAEYEINAKKHGVSVV-FSYL-DENMCIDYEDIISKID-DVDSVIIGNPNNPNGGLIN 162
Query: 189 VYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWI 248
+ H+ KLAE K KT++I DE + GD +G + + + +++K +
Sbjct: 163 KEKFIHVLKLAEE--KKKTIII-DEAFIEFT-GDPSSSFVGEIKNYSCLFIIRAMTKFFA 218
Query: 249 VPGWRLGWFVTTD 261
+PG R G+ +T +
Sbjct: 219 MPGIRFGYGITNN 231
>pdb|3EZS|A Chain A, Crystal Structure Of Aminotransferase Aspb (Np_207418.1)
From Helicobacter Pylori 26695 At 2.19 A Resolution
pdb|3EZS|B Chain B, Crystal Structure Of Aminotransferase Aspb (Np_207418.1)
From Helicobacter Pylori 26695 At 2.19 A Resolution
Length = 376
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 89/358 (24%), Positives = 139/358 (38%), Gaps = 45/358 (12%)
Query: 67 SEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDV--AMALLSRPG 124
+ N Y +A R A + R +L N++ T G + + + L
Sbjct: 49 THSLNIYPKSAFEESLRAAQRGFFKRRFKIELKENELISTLGSREVLFNFPSFVLFDYQN 108
Query: 125 ANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIIN-PG 183
I P P + IYE +A F ++ LL E D + + V LVI+N P
Sbjct: 109 PTIAYPNPFYQIYEGAAKF----IKAKSLLXPLTKENDFTPSLNEKELQEVDLVILNSPN 164
Query: 184 NPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKP---FVPMGVFGSTV--PIL 238
NP G S + L + A K ++I DE Y + P + G+ +L
Sbjct: 165 NPTGRTLSLEELISWVKLALKHDFILINDECYSEIYENTPPPSLLEACXLAGNEAFKNVL 224
Query: 239 TLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILG-DPATFIQAAVPSI- 296
+ SLSKR PG R G F+ D +++E+ K + LG A IQ A +
Sbjct: 225 VIHSLSKRSSAPGLRSG-FIAGD-------SRLLEKYKAFRAYLGYTSANAIQKASEAAW 276
Query: 297 LQQPDEVFFKKTL-NLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLXXXXX 355
L FF+ N LK + I N + P+ S V L +
Sbjct: 277 LDDRHAEFFRNIYANNLKLARKIFKN------TLIYPY----SFYVYLPVQ--------N 318
Query: 356 XXXFCFKLAKEESVIILPGTAVGLK----NWLRVTFAVDPYSLEECLDRIKSFYQRHA 409
F L + E +I LP +G +++R+ D LE+ L+ I+++ + HA
Sbjct: 319 GENFAKTLYQNEGIITLPALYLGRNRIGADYVRLALVYDTPLLEKPLEIIETYRENHA 376
>pdb|3T32|A Chain A, Crystal Structure Of A Putative C-S Lyase From Bacillus
Anthracis
pdb|3T32|B Chain B, Crystal Structure Of A Putative C-S Lyase From Bacillus
Anthracis
Length = 383
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 67/329 (20%), Positives = 135/329 (41%), Gaps = 23/329 (6%)
Query: 86 IAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIY--ELSAAF 143
I + + + + + ++G A+ ++ ++ ++L+ P +P + ++
Sbjct: 68 ICNWTKKQYNWDIQKEWIVFSAGIVPALSTSIQAFTKENESVLVQPPIYPPFFEXVTTNN 127
Query: 144 RHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETAN 203
R + V D + +D + +E Q ++ +P NP G V+ + L KL
Sbjct: 128 RQLCVSPLQKQNDT-YAIDFEHLEKQFQQGVKLXLLCSPHNPIGRVWKKEELTKLGSLCT 186
Query: 204 KLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVP--ILTLGSLSKRWIVPGWRLGWFVTTD 261
K +V+ADE++ +++ D P + +T + S + + G + +
Sbjct: 187 KYNVIVVADEIHSDIIYADHTHTPFASLSEELAARTITCXAPSXTFNIAGLQASIIII-- 244
Query: 262 PCGMFRKPKVVERMKKYFDILGDPA-TFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICY 320
P R+ + ++ F L A T Q+A +E+ F ++ +
Sbjct: 245 PNEKLRQAFTSIQYRQGFHGLNIFAYTAXQSAYTECNDWLNEIRF-----YIEDNAKFAC 299
Query: 321 NKIKE-IPCISCPHKPEGSMAVMLKLNLSLLXXXXXXXXFCFKLAKEESVIIL-PGTAVG 378
IK+ IP +S KPEGS +L ++ S L KL +E+ II+ PG G
Sbjct: 300 EYIKDHIPTLSVX-KPEGSF--LLWIDCSALNLSQDERT---KLLEEKGKIIVEPGEKYG 353
Query: 379 L--KNWLRVTFAVDPYSLEECLDRIKSFY 405
L + + + LEE L+R++ +
Sbjct: 354 LGGEEHIGINIGCPRSVLEEILNRLRHTF 382
>pdb|3ASA|A Chain A, Crystal Structure Of Apo-Ll-Diaminopimelate
Aminotransferase From Chlamydia Trachomatis
pdb|3ASB|A Chain A, Crystal Structure Of Plp-Bound Ll-Diaminopimelate
Aminotransferase From Chlamydia Trachomatis
Length = 400
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 60/295 (20%), Positives = 118/295 (40%), Gaps = 20/295 (6%)
Query: 31 EKNEKKVISLAMGDPTVHSCFXXXXXXXXXXXXXXXSEKFNGYAPTAGLPLTRRAIAEYL 90
E + VI+L++GD T GY P GLP R+ ++E
Sbjct: 29 ENPQHTVINLSIGDTTQPLNASVAEAFASSIARLSSPTTCRGYGPDFGLPALRQKLSEDF 88
Query: 91 SRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIY-ELSAAFRHIEVR 149
R + ++F++ G + ++ P + + P +P Y +++ E+
Sbjct: 89 YRGF---VDAKEIFISDGAKVDLFRLLSFFG-PNQTVAIQDPSYPAYLDIARLTGAKEII 144
Query: 150 HFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLV 209
L + + + + D + L + +P NP G V + L+ + A + + L+
Sbjct: 145 ALPCLQENAFFPEFPE-----DTHIDILCLCSPNNPTGTVLNKDQLRAIVHYAIEHEILI 199
Query: 210 IADEVYGHLVFGDKPFVPMGVF---GSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMF 266
+ D Y F P +P +F + + + S SK G RLGW V
Sbjct: 200 LFDAAYS--TFISDPSLPKSIFEIPDARFCAIEINSFSKPLGFAGIRLGWTVIPQELTYA 257
Query: 267 RKPKVVERMKKY----FDILGDPATFIQAAVPSILQQPDEV-FFKKTLNLLKQSV 316
V++ +++ F+ PA A SIL Q + + ++++ +LL++++
Sbjct: 258 DGHFVIQDWERFLSTTFNGASIPAQEAGVAGLSILPQLEAIHYYRENSDLLRKAL 312
>pdb|1C7N|A Chain A, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal 5'-Phosphate Cofactor
pdb|1C7N|B Chain B, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal 5'-Phosphate Cofactor
pdb|1C7N|C Chain C, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal 5'-Phosphate Cofactor
pdb|1C7N|D Chain D, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal 5'-Phosphate Cofactor
pdb|1C7N|E Chain E, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal 5'-Phosphate Cofactor
pdb|1C7N|F Chain F, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal 5'-Phosphate Cofactor
pdb|1C7N|G Chain G, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal 5'-Phosphate Cofactor
pdb|1C7N|H Chain H, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal 5'-Phosphate Cofactor
pdb|1C7O|A Chain A, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal
5'-Phosphate-L-Aminoethoxyvinylglycine Complex
pdb|1C7O|B Chain B, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal
5'-Phosphate-L-Aminoethoxyvinylglycine Complex
pdb|1C7O|C Chain C, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal
5'-Phosphate-L-Aminoethoxyvinylglycine Complex
pdb|1C7O|D Chain D, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal
5'-Phosphate-L-Aminoethoxyvinylglycine Complex
pdb|1C7O|E Chain E, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal
5'-Phosphate-L-Aminoethoxyvinylglycine Complex
pdb|1C7O|F Chain F, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal
5'-Phosphate-L-Aminoethoxyvinylglycine Complex
pdb|1C7O|G Chain G, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal
5'-Phosphate-L-Aminoethoxyvinylglycine Complex
pdb|1C7O|H Chain H, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal
5'-Phosphate-L-Aminoethoxyvinylglycine Complex
Length = 399
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/139 (20%), Positives = 71/139 (51%), Gaps = 2/139 (1%)
Query: 83 RRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAA 142
++ + +++ + + + + T+G A+ A+ ++PG +++ P + + ++
Sbjct: 72 KKTVKKWMKDRHQWDIQTDWIINTAGVVPAVFNAVREFTKPGDGVIIITPVYYPFFMAIK 131
Query: 143 FRHIEVRHFDLLPDKGW-EVDLDDIESLA-DQNTVALVIINPGNPCGNVYSYQHLQKLAE 200
+ ++ +LL G+ +D +E L+ D+N AL+ +P NP G V+ LQK+ +
Sbjct: 132 NQERKIIECELLEKDGYYTIDFQKLEKLSKDKNNKALLFCSPHNPVGRVWKKDELQKIKD 191
Query: 201 TANKLKTLVIADEVYGHLV 219
K ++ +DE++ L+
Sbjct: 192 IVLKSDLMLWSDEIHFDLI 210
>pdb|3FFH|A Chain A, The Crystal Structure Of Histidinol-phosphate
Aminotransferase From Listeria Innocua Clip11262.
pdb|3FFH|B Chain B, The Crystal Structure Of Histidinol-phosphate
Aminotransferase From Listeria Innocua Clip11262
Length = 363
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 58/133 (43%), Gaps = 9/133 (6%)
Query: 83 RRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAA 142
R+ +A++ Y+L ++ T+G + I++ +L N + P F Y +A
Sbjct: 73 RKEVADF------YQLEEEELIFTAGVDELIELLTRVLLDTTTNTVXATPTFVQYRQNAL 126
Query: 143 FRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETA 202
EVR LL D E DL+ + D+ T + I NP NP GN +Q +
Sbjct: 127 IEGAEVREIPLLQD--GEHDLEGXLNAIDEKTTIVWICNPNNPTGNYIELADIQAFLDRV 184
Query: 203 NKLKTLVIADEVY 215
LV+ DE Y
Sbjct: 185 PS-DVLVVLDEAY 196
>pdb|1D2F|A Chain A, X-Ray Structure Of Maly From Escherichia Coli: A
Pyridoxal-5'- Phosphate-Dependent Enzyme Acting As A
Modulator In Mal Gene Expression
pdb|1D2F|B Chain B, X-Ray Structure Of Maly From Escherichia Coli: A
Pyridoxal-5'- Phosphate-Dependent Enzyme Acting As A
Modulator In Mal Gene Expression
Length = 390
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 73/168 (43%), Gaps = 13/168 (7%)
Query: 85 AIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFR 144
AIA + S + V + + S G +++ P + A ++
Sbjct: 72 AIAHWFSTQHYTAIDSQTVVYGPSVIYMVSELIRQWSETGEGVVIHTPAY-----DAFYK 126
Query: 145 HIEVRHFDLLP------DKGWEVDLDDIES-LADQNTVALVIINPGNPCGNVYSYQHLQK 197
IE ++P GW D+ +E+ LA +++ +P NP G V++ L+
Sbjct: 127 AIEGNQRTVMPVALEKQADGWFCDMGKLEAVLAKPECKIMLLCSPQNPTGKVWTCDELEI 186
Query: 198 LAETANKLKTLVIADEVYGHLVFGDKPFVPM-GVFGSTVPILTLGSLS 244
+A+ + VI+DE++ +V+G++P +P V +LT GS S
Sbjct: 187 MADLCERHGVRVISDEIHMDMVWGEQPHIPWSNVARGDWALLTSGSKS 234
>pdb|1VP4|A Chain A, Crystal Structure Of A Putative Aminotransferase (Tm1131)
From Thermotoga Maritima Msb8 At 1.82 A Resolution
pdb|1VP4|B Chain B, Crystal Structure Of A Putative Aminotransferase (Tm1131)
From Thermotoga Maritima Msb8 At 1.82 A Resolution
Length = 425
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 87/195 (44%), Gaps = 18/195 (9%)
Query: 73 YAPTAGLPLTRRAIAEYLSRDLPYK-LTPNDVFVTSGCTQAIDVAMALLSRPGANILLPR 131
Y+ T G P+ ++ I + L R L +++ T G QA+D+ L + +L
Sbjct: 81 YSTTEGDPVLKQQILKLLERXYGITGLDEDNLIFTVGSQQALDLIGKLFLDDESYCVLDD 140
Query: 132 PGFPIYELSA--AFRHIEVRHFDLLPDKGWEVDLDDIE---SLADQN------TVALVII 180
P + L A AFR + +F ++P + DL+ +E S D+N V+
Sbjct: 141 PAY----LGAINAFRQY-LANFVVVPLEDDGXDLNVLERKLSEFDKNGKIKQVKFIYVVS 195
Query: 181 NPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTL 240
N NP G S + + L E A K ++ D+ YG L + + P+ G ++ L
Sbjct: 196 NFHNPAGVTTSLEKRKALVEIAEKYDLFIVEDDPYGALRYEGETVDPIFKIGGPERVVLL 255
Query: 241 GSLSKRWIVPGWRLG 255
+ SK + PG R+G
Sbjct: 256 NTFSK-VLAPGLRIG 269
>pdb|4GE7|A Chain A, Kynurenine Aminotransferase Ii Inhibitors
pdb|4GE7|B Chain B, Kynurenine Aminotransferase Ii Inhibitors
Length = 439
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 109/259 (42%), Gaps = 43/259 (16%)
Query: 73 YAPTAGLP-----LTRRAIAEYLSRDLPYKLTPN--DVFVTSGCTQAIDVAMALLSRPGA 125
Y+P+AG+P L + I + + Y + D+ VTSG Q + ++ PG
Sbjct: 74 YSPSAGIPELLSWLKQLQIKLHNPPTIHYPPSQGQMDLCVTSGSQQGLXKVFEMIINPGD 133
Query: 126 NILLPRPGF-----PIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESL--------ADQ 172
N+LL P + ++ L ++ ++PD L DI S +
Sbjct: 134 NVLLDEPAYSGTLQSLHPLGCNIINVASDESGIVPDS-----LRDILSRWKPEDAKNPQK 188
Query: 173 NTVALV--IINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVF--GDKP-FVP 227
NT + + N NP GN + + +++ E A K L+I D+ Y L F G P F+
Sbjct: 189 NTPKFLYTVPNGNNPTGNSLTSERKKEIYELARKYDFLIIEDDPYYFLQFNSGRVPTFLS 248
Query: 228 MGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILG-DPA 286
M V G ++ S SK I G R+G+ P ++ER+ + + P+
Sbjct: 249 MDVDGR---VIRADSFSK-IISSGLRIGFLTGPKP--------LIERVILHIQVSTLHPS 296
Query: 287 TFIQAAVPSILQQPDEVFF 305
TF Q + +L + E F
Sbjct: 297 TFNQLMISQLLHEWGEEGF 315
>pdb|3EUC|A Chain A, Crystal Structure Of Histidinol-Phosphate Aminotransferase
(Yp_297314.1) From Ralstonia Eutropha Jmp134 At 2.05 A
Resolution
pdb|3EUC|B Chain B, Crystal Structure Of Histidinol-Phosphate Aminotransferase
(Yp_297314.1) From Ralstonia Eutropha Jmp134 At 2.05 A
Resolution
Length = 367
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 71/173 (41%), Gaps = 29/173 (16%)
Query: 102 DVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEV----RHFDLLPDK 157
+V + +G + I +RPGA + P PGF Y SA F +E D D+
Sbjct: 87 EVLLGNGSDEIISXLALAAARPGAKVXAPVPGFVXYAXSAQFAGLEFVGVPLRADFTLDR 146
Query: 158 GWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANK--LKTLVIADEVY 215
G + + A+ + + P NP GN++ + + A ++LV+ DE Y
Sbjct: 147 GAX-----LAAXAEHQPAIVYLAYPNNPTGNLFDAADXEAIVRAAQGSVCRSLVVVDEAY 201
Query: 216 GHLVFGDKPFVP------MGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDP 262
+PF + FG+ + T+ L + G RLG +V DP
Sbjct: 202 -------QPFAQESWXSRLTDFGNLLVXRTVSKLG----LAGIRLG-YVAGDP 242
>pdb|3CQ5|A Chain A, Histidinol-Phosphate Aminotransferase From Corynebacterium
Glutamicum In Complex With Pmp
pdb|3CQ5|B Chain B, Histidinol-Phosphate Aminotransferase From Corynebacterium
Glutamicum In Complex With Pmp
pdb|3CQ5|C Chain C, Histidinol-Phosphate Aminotransferase From Corynebacterium
Glutamicum In Complex With Pmp
Length = 369
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/177 (21%), Positives = 77/177 (43%), Gaps = 8/177 (4%)
Query: 83 RRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAA 142
R +A Y+++ +T ++++ +G + + + PG L +P + ++ + A
Sbjct: 75 RDELAAYITKQTGVAVTRDNLWAANGSNEILQQLLQAFGGPGRTALGFQPSYSMHPILAK 134
Query: 143 FRHIEVRHFDLLPDKGWEVDLD-DIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAET 201
H E D + +D+D +E + + + + P NP G+V S ++++
Sbjct: 135 GTHTEFIAVSRGAD--FRIDMDVALEEIRAKQPDIVFVTTPNNPTGDVTSLDDVERIINV 192
Query: 202 ANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFV 258
A +VI DE Y F P + ++ ++SK + G RLG+FV
Sbjct: 193 A---PGIVIVDEAYAE--FSPSPSATTLLEKYPTKLVVSRTMSKAFDFAGGRLGYFV 244
>pdb|4GDY|A Chain A, Kynurenine Aminotransferase Ii Inhibitors
pdb|4GDY|B Chain B, Kynurenine Aminotransferase Ii Inhibitors
pdb|4GE4|A Chain A, Kynurenine Aminotransferase Ii Inhibitors
pdb|4GE4|B Chain B, Kynurenine Aminotransferase Ii Inhibitors
pdb|4GE9|A Chain A, Kynurenine Aminotransferase Ii Inhibitors
pdb|4GE9|B Chain B, Kynurenine Aminotransferase Ii Inhibitors
pdb|4GE9|C Chain C, Kynurenine Aminotransferase Ii Inhibitors
pdb|4GE9|D Chain D, Kynurenine Aminotransferase Ii Inhibitors
Length = 439
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 109/259 (42%), Gaps = 43/259 (16%)
Query: 73 YAPTAGLP-----LTRRAIAEYLSRDLPYKLTPN--DVFVTSGCTQAIDVAMALLSRPGA 125
Y+P+AG+P L + I + + Y + D+ VTSG Q + ++ PG
Sbjct: 74 YSPSAGIPELLSWLKQLQIKLHNPPTIHYPPSQGQMDLCVTSGSQQGLCKVFEMIINPGD 133
Query: 126 NILLPRPGF-----PIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESL--------ADQ 172
N+LL P + ++ L ++ ++PD L DI S +
Sbjct: 134 NVLLDEPAYSGTLQSLHPLGCNIINVASDESGIVPDS-----LRDILSRWKPEDAKNPQK 188
Query: 173 NTVALV--IINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVF--GDKP-FVP 227
NT + + N NP GN + + +++ E A K L+I D+ Y L F G P F+
Sbjct: 189 NTPKFLYTVPNGNNPTGNSLTSERKKEIYELARKYDFLIIEDDPYYFLQFNSGRVPTFLS 248
Query: 228 MGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILG-DPA 286
M V G ++ S SK I G R+G+ P ++ER+ + + P+
Sbjct: 249 MDVDGR---VIRADSFSK-IISSGLRIGFLTGPKP--------LIERVILHIQVSTLHPS 296
Query: 287 TFIQAAVPSILQQPDEVFF 305
TF Q + +L + E F
Sbjct: 297 TFNQLMISQLLHEWGEEGF 315
>pdb|3CQ4|A Chain A, Histidinol-Phosphate Aminotransferase From Corynebacterium
Glutamicum
pdb|3CQ4|B Chain B, Histidinol-Phosphate Aminotransferase From Corynebacterium
Glutamicum
Length = 376
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/177 (21%), Positives = 77/177 (43%), Gaps = 8/177 (4%)
Query: 83 RRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAA 142
R +A Y+++ +T ++++ +G + + + PG L +P + ++ + A
Sbjct: 72 RDELAAYITKQTGVAVTRDNLWAANGSNEILQQLLQAFGGPGRTALGFQPSYSMHPILAK 131
Query: 143 FRHIEVRHFDLLPDKGWEVDLD-DIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAET 201
H E D + +D+D +E + + + + P NP G+V S ++++
Sbjct: 132 GTHTEFIAVSRGAD--FRIDMDVALEEIRAKQPDIVFVTTPNNPTGDVTSLDDVERIINV 189
Query: 202 ANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFV 258
A +VI DE Y F P + ++ ++SK + G RLG+FV
Sbjct: 190 A---PGIVIVDEAYAE--FSPSPSATTLLEKYPTKLVVSRTMSKAFDFAGGRLGYFV 241
>pdb|2O1B|A Chain A, Structure Of Aminotransferase From Staphylococcus Aureus
Length = 404
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 73/337 (21%), Positives = 129/337 (38%), Gaps = 29/337 (8%)
Query: 73 YAPTAGLPLTRRAIAEYLSRDLPYKLTPND-VFVTSGCTQAIDVAMALLSRPGANILLPR 131
Y G ++AI ++ R L D V + G + + PG +LLP
Sbjct: 81 YGAFHGKEAFKQAIVDFYQRQYNVTLDKEDEVCILYGTKNGLVAVPTCVINPGDYVLLPD 140
Query: 132 PGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYS 191
PG+ Y + +L P + D ++S T + + P NP G+ +
Sbjct: 141 PGYTDYLAGVLLADGKPVPLNLEPPH-YLPDWSKVDSQIIDKTKLIYLTYPNNPTGSTAT 199
Query: 192 YQHLQKLAETANKLKTLVIADEVYGHLVFGDK-PFVPMGVFGSTVPILTLGSLSKRWIVP 250
+ + T ++ D YG F K P + G V I + SLSK +
Sbjct: 200 KEVFDEAIAKFKGTDTKIVHDFAYGAFGFDAKNPSILASENGKDVAI-EIYSLSKGYNXS 258
Query: 251 GWRLGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATF--IQAAVPSILQQPDEVFFKKT 308
G+R+G+ V ++ +KKY + F +Q A L D+ F ++
Sbjct: 259 GFRVGFAVGNK--------DXIQALKKY-QTHTNAGXFGALQDAAIYALNHYDD-FLEEQ 308
Query: 309 LNLLKQSVDICYNKI--KEIPCISCPHKPEGSMAVMLKLNLSLLXXXXXXXXFCFKLAKE 366
N+ K D + ++P + +G + V L+ F L +E
Sbjct: 309 SNVFKTRRDRFEAXLAKADLPFVHA----KGGIYVWLE-----TPPGYDSEQFEQFLVQE 359
Query: 367 ESVIILPGTAVGLKN--WLRVTFAVDPYSLEECLDRI 401
+S+++ PG G ++R++ A+D L+E R+
Sbjct: 360 KSILVAPGKPFGENGNRYVRISLALDDQKLDEAAIRL 396
>pdb|3UE8|A Chain A, Kynurenine Aminotransferase Ii Inhibitors
pdb|3UE8|B Chain B, Kynurenine Aminotransferase Ii Inhibitors
Length = 439
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 107/259 (41%), Gaps = 43/259 (16%)
Query: 73 YAPTAGLP-----LTRRAIAEYLSRDLPYKLTPN--DVFVTSGCTQAIDVAMALLSRPGA 125
Y+P+AG+P L + I + + Y + D+ VTSG Q + ++ PG
Sbjct: 74 YSPSAGIPELLSWLKQLQIKLHNPPTIHYPPSQGQMDLCVTSGSQQGLCKVFEMIINPGD 133
Query: 126 NILLPRPGF-----PIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESL--------ADQ 172
N+LL P + ++ L ++ ++PD L DI S +
Sbjct: 134 NVLLDEPAYSGTLQSLHPLGCNIINVASDESGIVPD-----SLRDILSRWKPEDAKNPQK 188
Query: 173 NTVALV--IINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGD---KPFVP 227
NT + + N NP GN + + +++ E A K L+I D+ Y L F F+
Sbjct: 189 NTPKFLYTVPNGNNPTGNSLTSERKKEIYELARKYDFLIIEDDPYYFLQFNKFRVPTFLS 248
Query: 228 MGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILG-DPA 286
M V G ++ S SK I G R+G+ P ++ER+ + + P+
Sbjct: 249 MDVDGR---VIRADSFSK-IISSGLRIGFLTGPKP--------LIERVILHIQVSTLHPS 296
Query: 287 TFIQAAVPSILQQPDEVFF 305
TF Q + +L + E F
Sbjct: 297 TFNQLMISQLLHEWGEEGF 315
>pdb|2R2N|A Chain A, The Crystal Structure Of Human Kynurenine Aminotransferase
Ii In Complex With Kynurenine
pdb|2R2N|B Chain B, The Crystal Structure Of Human Kynurenine Aminotransferase
Ii In Complex With Kynurenine
pdb|2R2N|C Chain C, The Crystal Structure Of Human Kynurenine Aminotransferase
Ii In Complex With Kynurenine
pdb|2R2N|D Chain D, The Crystal Structure Of Human Kynurenine Aminotransferase
Ii In Complex With Kynurenine
Length = 425
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 107/259 (41%), Gaps = 43/259 (16%)
Query: 73 YAPTAGLP-----LTRRAIAEYLSRDLPYKLTPN--DVFVTSGCTQAIDVAMALLSRPGA 125
Y+P+AG+P L + I + + Y + D+ VTSG Q + ++ PG
Sbjct: 74 YSPSAGIPELLSWLKQLQIKLHNPPTIHYPPSQGQMDLCVTSGSQQGLCKVFEMIINPGD 133
Query: 126 NILLPRPGF-----PIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESL--------ADQ 172
N+LL P + ++ L ++ ++PD L DI S +
Sbjct: 134 NVLLDEPAYSGTLQSLHPLGCNIINVASDESGIVPDS-----LRDILSRWKPEDAKNPQK 188
Query: 173 NTVALV--IINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGD---KPFVP 227
NT + + N NP GN + + +++ E A K L+I D+ Y L F F+
Sbjct: 189 NTPKFLYTVPNGNNPTGNSLTSERKKEIYELARKYDFLIIEDDPYYFLQFNKFRVPTFLS 248
Query: 228 MGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILG-DPA 286
M V G ++ S SK I G R+G+ P ++ER+ + + P+
Sbjct: 249 MDVDGR---VIRADSFSK-IISSGLRIGFLTGPKP--------LIERVILHIQVSTLHPS 296
Query: 287 TFIQAAVPSILQQPDEVFF 305
TF Q + +L + E F
Sbjct: 297 TFNQLMISQLLHEWGEEGF 315
>pdb|2XH1|A Chain A, Crystal Structure Of Human Kat Ii-Inhibitor Complex
pdb|2XH1|B Chain B, Crystal Structure Of Human Kat Ii-Inhibitor Complex
Length = 425
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 107/259 (41%), Gaps = 43/259 (16%)
Query: 73 YAPTAGLP-----LTRRAIAEYLSRDLPYKLTPN--DVFVTSGCTQAIDVAMALLSRPGA 125
Y+P+AG+P L + I + + Y + D+ VTSG Q + ++ PG
Sbjct: 74 YSPSAGIPELLSWLKQLQIKLHNPPTIHYPPSQGQMDLCVTSGSQQGLCKVFEMIINPGD 133
Query: 126 NILLPRPGF-----PIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESL--------ADQ 172
N+LL P + ++ L ++ ++PD L DI S +
Sbjct: 134 NVLLDEPAYSGTLQSLHPLGCNIINVASDESGIVPDS-----LRDILSRWKPEDAKNPQK 188
Query: 173 NTVALV--IINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGD---KPFVP 227
NT + + N NP GN + + +++ E A K L+I D+ Y L F F+
Sbjct: 189 NTPKFLYTVPNGNNPTGNSLTSERKKEIYELARKYDFLIIEDDPYYFLQFNKFRVPTFLS 248
Query: 228 MGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILG-DPA 286
M V G ++ S SK I G R+G+ P ++ER+ + + P+
Sbjct: 249 MDVDGR---VIRADSFSK-IISSGLRIGFLTGPKP--------LIERVILHIQVSTLHPS 296
Query: 287 TFIQAAVPSILQQPDEVFF 305
TF Q + +L + E F
Sbjct: 297 TFNQLMISQLLHEWGEEGF 315
>pdb|2QLR|A Chain A, Crystal Structure Of Human Kynurenine Aminotransferase Ii
pdb|2QLR|B Chain B, Crystal Structure Of Human Kynurenine Aminotransferase Ii
pdb|2QLR|C Chain C, Crystal Structure Of Human Kynurenine Aminotransferase Ii
pdb|2QLR|D Chain D, Crystal Structure Of Human Kynurenine Aminotransferase Ii
pdb|3DC1|A Chain A, Crystal Structure Of Kynurenine Aminotransferase Ii
Complex With Alpha-Ketoglutarate
pdb|3DC1|B Chain B, Crystal Structure Of Kynurenine Aminotransferase Ii
Complex With Alpha-Ketoglutarate
pdb|3DC1|C Chain C, Crystal Structure Of Kynurenine Aminotransferase Ii
Complex With Alpha-Ketoglutarate
pdb|3DC1|D Chain D, Crystal Structure Of Kynurenine Aminotransferase Ii
Complex With Alpha-Ketoglutarate
Length = 425
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 61/259 (23%), Positives = 105/259 (40%), Gaps = 43/259 (16%)
Query: 73 YAPTAGLP-----LTRRAIAEYLSRDLPYKLTPN--DVFVTSGCTQAIDVAMALLSRPGA 125
Y+P+AG+P L + I + + Y + D+ VTSG Q + ++ PG
Sbjct: 74 YSPSAGIPELLSWLKQLQIKLHNPPTIHYPPSQGQMDLCVTSGSQQGLCKVFEMIINPGD 133
Query: 126 NILLPRPGF-----PIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESL--------ADQ 172
N+LL P + ++ L ++ ++PD L DI S +
Sbjct: 134 NVLLDEPAYSGTLQSLHPLGCNIINVASDESGIVPDS-----LRDILSRWKPEDAKNPQK 188
Query: 173 NTVALV--IINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGD---KPFVP 227
NT + + N NP GN + + +++ E A K L+I D+ Y L F F+
Sbjct: 189 NTPKFLYTVPNGNNPTGNSLTSERKKEIYELARKYDFLIIEDDPYYFLQFNKFRVPTFLS 248
Query: 228 MGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILG-DPA 286
M V G + + + I G R+G+ P ++ER+ + + P+
Sbjct: 249 MDVDGRVIRADSFSXI----ISSGLRIGFLTGPKP--------LIERVILHIQVSTLHPS 296
Query: 287 TFIQAAVPSILQQPDEVFF 305
TF Q + +L + E F
Sbjct: 297 TFNQLMISQLLHEWGEEGF 315
>pdb|2VGZ|A Chain A, Crystal Structure Of Human Kynurenine Aminotransferase Ii
pdb|2VGZ|B Chain B, Crystal Structure Of Human Kynurenine Aminotransferase Ii
Length = 427
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 61/259 (23%), Positives = 105/259 (40%), Gaps = 43/259 (16%)
Query: 73 YAPTAGLP-----LTRRAIAEYLSRDLPYKLTPN--DVFVTSGCTQAIDVAMALLSRPGA 125
Y+P+AG+P L + I + + Y + D+ VTSG Q + ++ PG
Sbjct: 76 YSPSAGIPELLSWLKQLQIKLHNPPTIHYPPSQGQMDLCVTSGSQQGLCKVFEMIINPGD 135
Query: 126 NILLPRPGF-----PIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESL--------ADQ 172
N+LL P + ++ L ++ ++PD L DI S +
Sbjct: 136 NVLLDEPAYSGTLQSLHPLGCNIINVASDESGIVPDS-----LRDILSRWKPEDAKNPQK 190
Query: 173 NTVALV--IINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGD---KPFVP 227
NT + + N NP GN + + +++ E A K L+I D+ Y L F F+
Sbjct: 191 NTPKFLYTVPNGNNPTGNSLTSERKKEIYELARKYDFLIIEDDPYYFLQFNKFRVPTFLS 250
Query: 228 MGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILG-DPA 286
M V G + + + I G R+G+ P ++ER+ + + P+
Sbjct: 251 MDVDGRVIRADSFSXI----ISSGLRIGFLTGPKP--------LIERVILHIQVSTLHPS 298
Query: 287 TFIQAAVPSILQQPDEVFF 305
TF Q + +L + E F
Sbjct: 299 TFNQLMISQLLHEWGEEGF 317
>pdb|2DOU|A Chain A, Probable N-Succinyldiaminopimelate Aminotransferase
(Ttha0342) From Thermus Thermophilus Hb8
pdb|2DOU|B Chain B, Probable N-Succinyldiaminopimelate Aminotransferase
(Ttha0342) From Thermus Thermophilus Hb8
Length = 376
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 77/164 (46%), Gaps = 8/164 (4%)
Query: 101 NDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWE 160
+ G + + + L+ P +LLP +P Y A R +R F L+P + E
Sbjct: 88 REALALIGSQEGLAHLLLALTEPEDLLLLPEVAYPSY--FGAARVASLRTF-LIPLR--E 142
Query: 161 VDLDDIESLAD---QNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGH 217
L D++++ + + L++ P NP G V + + ++ A K +I D Y
Sbjct: 143 DGLADLKAVPEGVWREAKVLLLNYPNNPTGAVADWGYFEEALGLARKHGLWLIHDNPYVD 202
Query: 218 LVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTD 261
V+ + P+ + G+ ++ L SLSK + + G+RLG+ + ++
Sbjct: 203 QVYEGEAPSPLALPGAKERVVELFSLSKSYNLAGFRLGFALGSE 246
>pdb|3CQ6|A Chain A, Histidinol-Phosphate Aminotransferase From Corynebacterium
Glutamicum Holo-Form (Plp Covalently Bound )
pdb|3CQ6|C Chain C, Histidinol-Phosphate Aminotransferase From Corynebacterium
Glutamicum Holo-Form (Plp Covalently Bound )
pdb|3CQ6|E Chain E, Histidinol-Phosphate Aminotransferase From Corynebacterium
Glutamicum Holo-Form (Plp Covalently Bound )
Length = 369
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 37/177 (20%), Positives = 76/177 (42%), Gaps = 8/177 (4%)
Query: 83 RRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAA 142
R +A Y+++ +T ++++ +G + + + PG L +P + ++ + A
Sbjct: 75 RDELAAYITKQTGVAVTRDNLWAANGSNEILQQLLQAFGGPGRTALGFQPSYSMHPILAK 134
Query: 143 FRHIEVRHFDLLPDKGWEVDLD-DIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAET 201
H E D + +D+D +E + + + + P NP G+V S ++++
Sbjct: 135 GTHTEFIAVSRGAD--FRIDMDVALEEIRAKQPDIVFVTTPNNPTGDVTSLDDVERIINV 192
Query: 202 ANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFV 258
A +VI DE Y F P + ++ ++S + G RLG+FV
Sbjct: 193 A---PGIVIVDEAYAE--FSPSPSATTLLEKYPTKLVVSRTMSXAFDFAGGRLGYFV 244
>pdb|3QGU|A Chain A, L,L-Diaminopimelate Aminotransferase From Chalmydomonas
Reinhardtii
pdb|3QGU|B Chain B, L,L-Diaminopimelate Aminotransferase From Chalmydomonas
Reinhardtii
Length = 449
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 56/248 (22%), Positives = 93/248 (37%), Gaps = 26/248 (10%)
Query: 26 QSVDDEKN-EKKVISLAMGDPTVHSCFXXXXXXXXXXXXXXXSEKFNGYAPTAGLPLTRR 84
+ EKN + K+ISL +GD T E ++GY G R
Sbjct: 59 RKAHQEKNPDAKIISLGIGDTTEPLPKYIADAMAKAAAGLATREGYSGYGAEQGQGALRE 118
Query: 85 AIAEYLSRDLPYKLTPNDVFVTSGCTQAI-DVAMALLSRPGANILLPRPGFPIYELSAAF 143
A+A +++F++ G I + M S+P + + P +P+Y ++
Sbjct: 119 AVASTFYGHA--GRAADEIFISDGSKCDIARIQMMFGSKP--TVAVQDPSYPVYVDTSVM 174
Query: 144 RHIEVRH----FDLL------PDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQ 193
+ H FD + PD + DL + T + +P NP G +
Sbjct: 175 MGMTGDHNGTGFDGIEYMVCNPDNHFFPDLSKA-----KRTDIIFFCSPNNPTGAAATRA 229
Query: 194 HLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVF---GSTVPILTLGSLSKRWIVP 250
L +L A K ++++ D Y + P P ++ G+ + S SK
Sbjct: 230 QLTELVNFARKNGSILVYDAAYALYI--SNPDCPKTIYEIPGADEVAIETCSFSKYAGFT 287
Query: 251 GWRLGWFV 258
G RLGW V
Sbjct: 288 GVRLGWTV 295
>pdb|2ZY2|A Chain A, Dodecameric L-Aspartate Beta-Decarboxylase
Length = 544
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 84/201 (41%), Gaps = 32/201 (15%)
Query: 75 PTAGLPLTRRAIAEYLSRDLPYKLTPN---DVFVTSGCTQAI-----DVAMALLSRPGAN 126
P L ++ + + +Y+ R++ P D+F G T A+ + ++ L + G
Sbjct: 136 PPRMLTVSEQIVRQYIVREMAGGAVPPESVDLFAVEGGTAAMAYIFESLRISGLLKAGDK 195
Query: 127 ILLPRPGF-PIYELSAAFRHIEVRHFDLL-------PDKGWEVDLDDIESLADQNTVALV 178
+ + P F P E+ E+ +DL PD GW+ +++ L D +
Sbjct: 196 VAIGMPVFTPYIEIP------ELAQYDLKEVPIHADPDNGWQYSDAELDKLKDPDVKIFF 249
Query: 179 IINPGNPCGNVYSYQHLQKLAETANKLK--TLVIADEVYGHLVFGDKPFVPMGVFGSTVP 236
+NP NP + L ++ + + L++ D+VYG F D+ S P
Sbjct: 250 CVNPSNPPSVKMDQRSLDRVRAIVAEQRPDLLILTDDVYG--TFADE----FQSLFSVCP 303
Query: 237 ILTL--GSLSKRWIVPGWRLG 255
TL S SK + GWRLG
Sbjct: 304 RNTLLVYSFSKYFGATGWRLG 324
>pdb|3NRA|A Chain A, Crystal Structure Of An Aspartate Aminotransferase
(Yp_354942.1) From Rhodobacter Sphaeroides 2.4.1 At 2.15
A Resolution
pdb|3NRA|B Chain B, Crystal Structure Of An Aspartate Aminotransferase
(Yp_354942.1) From Rhodobacter Sphaeroides 2.4.1 At 2.15
A Resolution
Length = 407
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 44/97 (45%), Gaps = 2/97 (2%)
Query: 161 VDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVF 220
+DL +E + NP NP G VYS + + ++A A + VIAD++Y L +
Sbjct: 167 LDLTGLEEAFKAGARVFLFSNPNNPAGVVYSAEEIGQIAALAARYGATVIADQLYSRLRY 226
Query: 221 GDKPFVPMGVFGSTVP--ILTLGSLSKRWIVPGWRLG 255
+ + + ++T+ S + G+RLG
Sbjct: 227 AGASYTHLRAEAAVDAENVVTIXGPSXTESLSGYRLG 263
>pdb|3G7Q|A Chain A, Crystal Structure Of Valine-Pyruvate Aminotransferase Avta
(Np_462565.1) From Salmonella Typhimurium Lt2 At 1.80 A
Resolution
Length = 417
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 86/206 (41%), Gaps = 30/206 (14%)
Query: 150 HFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLV 209
+ +LLP+ ++ +D + T + + P NP GNV + + L KL AN+ +
Sbjct: 157 NIELLPEGQFKYHVDFEHLHIGEETGXICVSRPTNPTGNVITDEELXKLDRLANQHNIPL 216
Query: 210 IADEVYGHLVFGDKPFVPMGVFGSTVP-----ILTLGSLSKRWIVPGWRLGWFVTTDPCG 264
+ D YG PF P +F P I+ SLSK + PG R G + D
Sbjct: 217 VIDNAYG------VPF-PGIIFSEARPLWNPNIILCXSLSKLGL-PGSRCGIIIAND--- 265
Query: 265 MFRKPKVVERMKKYFDILG-DPATFIQAAVPSILQQPDEVFFKKTL------NLLKQSVD 317
K + + I+ P A +++ D + +T+ ++Q++
Sbjct: 266 -----KTITAIANXNGIISLAPGGXGPAXXCEXIKRNDLLRLSETVIKPFYYQRVQQTIA 320
Query: 318 ICYNKIKEIPCISCPHKPEGSMAVML 343
I + E C+ HKPEG++ + L
Sbjct: 321 IIRRYLSEERCLI--HKPEGAIFLWL 344
>pdb|3IF2|A Chain A, Crystal Structure Of Putative Amino-Acid Aminotransferase
(Yp_265399.1) From Psychrobacter Arcticum 273-4 At 2.50
A Resolution
pdb|3IF2|B Chain B, Crystal Structure Of Putative Amino-Acid Aminotransferase
(Yp_265399.1) From Psychrobacter Arcticum 273-4 At 2.50
A Resolution
Length = 444
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 68/303 (22%), Positives = 116/303 (38%), Gaps = 67/303 (22%)
Query: 85 AIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGAN--------------ILLP 130
A+ + +R + LT ++ +T+G A L N ILLP
Sbjct: 91 ALVGFFNRHYDWNLTSENIALTNGSQNAFFYLFNLFGGAFVNEHSQDKESKSVDKSILLP 150
Query: 131 RPGFPIYELSAAFRHIEVRHF-------DLLPDKGWE------VDLDDIE---SLADQNT 174
P Y + + H+E +HF D + G E VD + +E +L +
Sbjct: 151 LT--PEY-IGYSDVHVEGQHFAAVLPHIDEVTHDGEEGFFKYRVDFEALENLPALKEGRI 207
Query: 175 VALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYG----HLVFGDKPFVPMGV 230
A+ P NP GNV + + LAE A + +I D YG ++++ D +
Sbjct: 208 GAICCSRPTNPTGNVLTDEEXAHLAEIAKRYDIPLIIDNAYGXPFPNIIYSD---AHLNW 264
Query: 231 FGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQ 290
+T+ +L + +PG R G V KV+E + ++ T
Sbjct: 265 DNNTILCFSLSKIG----LPGXRTGIIVA--------DAKVIEAVSAXNAVVNLAPTRFG 312
Query: 291 AAVPSILQQPDEV----------FFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMA 340
AA+ + L D + F++K L +V + + + P HKPEG++
Sbjct: 313 AAIATPLVANDRIKQLSDNEIKPFYQKQATL---AVKLLKQALGDYPLXI--HKPEGAIF 367
Query: 341 VML 343
+ L
Sbjct: 368 LWL 370
>pdb|3G0T|A Chain A, Crystal Structure Of Putative Aspartate Aminotransferase
(Np_905498.1) From Porphyromonas Gingivalis W83 At 1.75
A Resolution
pdb|3G0T|B Chain B, Crystal Structure Of Putative Aspartate Aminotransferase
(Np_905498.1) From Porphyromonas Gingivalis W83 At 1.75
A Resolution
Length = 437
Score = 36.6 bits (83), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 60/148 (40%), Gaps = 6/148 (4%)
Query: 73 YAPTAGLPLTRRAIAEY----LSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANIL 128
Y GLP ++ + + ++ D+P + V GC + VA L
Sbjct: 78 YPNLDGLPELKQEASRFAKLFVNIDIPARACVPTVGSXQGCFVSFLVANRTHKNREYGTL 137
Query: 129 LPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIES-LADQNTVALVIINPGNPCG 187
PGF + +L + FDL +G ++ + +ES L +++ NP NP
Sbjct: 138 FIDPGFNLNKLQCRILGQKFESFDLFEYRGEKL-REKLESYLQTGQFCSIIYSNPNNPTW 196
Query: 188 NVYSYQHLQKLAETANKLKTLVIADEVY 215
+ + L+ + E A K +VI D Y
Sbjct: 197 QCXTDEELRIIGELATKHDVIVIEDLAY 224
>pdb|2ZY3|A Chain A, Dodecameric L-Aspartate Beta-Decarboxylase
pdb|2ZY3|B Chain B, Dodecameric L-Aspartate Beta-Decarboxylase
pdb|2ZY3|C Chain C, Dodecameric L-Aspartate Beta-Decarboxylase
pdb|2ZY3|D Chain D, Dodecameric L-Aspartate Beta-Decarboxylase
pdb|2ZY3|E Chain E, Dodecameric L-Aspartate Beta-Decarboxylase
pdb|2ZY3|F Chain F, Dodecameric L-Aspartate Beta-Decarboxylase
pdb|2ZY4|A Chain A, Dodecameric L-Aspartate Beta-Decarboxylase
pdb|2ZY4|B Chain B, Dodecameric L-Aspartate Beta-Decarboxylase
pdb|2ZY4|C Chain C, Dodecameric L-Aspartate Beta-Decarboxylase
pdb|2ZY4|D Chain D, Dodecameric L-Aspartate Beta-Decarboxylase
pdb|2ZY4|E Chain E, Dodecameric L-Aspartate Beta-Decarboxylase
pdb|2ZY4|F Chain F, Dodecameric L-Aspartate Beta-Decarboxylase
Length = 546
Score = 36.2 bits (82), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 43/198 (21%), Positives = 82/198 (41%), Gaps = 26/198 (13%)
Query: 75 PTAGLPLTRRAIAEYLSRDLPYKLTPND---VFVTSGCTQAI-----DVAMALLSRPGAN 126
P L ++ + + +Y+ R++ P++ +F G T A+ + + L + G
Sbjct: 137 PPRMLNISEKIVRQYIIREMGADAIPSESVNLFAVEGGTAAMAYIFESLKLNGLLKAGDK 196
Query: 127 ILLPRPGF-PIYELSAAFRH-IEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGN 184
+ + P F P E+ ++ +E + P W+ +++ L D +NP N
Sbjct: 197 VAIGMPVFTPYIEIPELAQYALEEVAINADPSLNWQYPDSELDKLKDPAIKIFFCVNPSN 256
Query: 185 PCGNVYSYQHLQKLAE--TANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPI----- 237
P + L+++ ++ +++ D+VYG F D F S I
Sbjct: 257 PPSVKMDQRSLERVRNIVAEHRPDLMILTDDVYG--TFADD-------FQSLFAICPENT 307
Query: 238 LTLGSLSKRWIVPGWRLG 255
L + S SK + GWRLG
Sbjct: 308 LLVYSFSKYFGATGWRLG 325
>pdb|2ZY5|A Chain A, R487a Mutant Of L-Aspartate Beta-Decarboxylase
pdb|2ZY5|B Chain B, R487a Mutant Of L-Aspartate Beta-Decarboxylase
pdb|2ZY5|C Chain C, R487a Mutant Of L-Aspartate Beta-Decarboxylase
pdb|2ZY5|D Chain D, R487a Mutant Of L-Aspartate Beta-Decarboxylase
pdb|2ZY5|E Chain E, R487a Mutant Of L-Aspartate Beta-Decarboxylase
pdb|2ZY5|F Chain F, R487a Mutant Of L-Aspartate Beta-Decarboxylase
Length = 546
Score = 36.2 bits (82), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 43/198 (21%), Positives = 82/198 (41%), Gaps = 26/198 (13%)
Query: 75 PTAGLPLTRRAIAEYLSRDLPYKLTPND---VFVTSGCTQAI-----DVAMALLSRPGAN 126
P L ++ + + +Y+ R++ P++ +F G T A+ + + L + G
Sbjct: 137 PPRMLNISEKIVRQYIIREMGADAIPSESVNLFAVEGGTAAMAYIFESLKLNGLLKAGDK 196
Query: 127 ILLPRPGF-PIYELSAAFRH-IEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGN 184
+ + P F P E+ ++ +E + P W+ +++ L D +NP N
Sbjct: 197 VAIGMPVFTPYIEIPELAQYALEEVAINADPSLNWQYPDSELDKLKDPAIKIFFCVNPSN 256
Query: 185 PCGNVYSYQHLQKLAE--TANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPI----- 237
P + L+++ ++ +++ D+VYG F D F S I
Sbjct: 257 PPSVKMDQRSLERVRNIVAEHRPDLMILTDDVYG--TFADD-------FQSLFAICPENT 307
Query: 238 LTLGSLSKRWIVPGWRLG 255
L + S SK + GWRLG
Sbjct: 308 LLVYSFSKYFGATGWRLG 325
>pdb|3FDD|A Chain A, The Crystal Structure Of The Pseudomonas Dacunhae
Aspartate-Beta- Decarboxylase Reveals A Novel Oligomeric
Assembly For A Pyridoxal-5- Phosphate Dependent Enzyme
Length = 533
Score = 35.8 bits (81), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 39/193 (20%), Positives = 81/193 (41%), Gaps = 16/193 (8%)
Query: 75 PTAGLPLTRRAIAEYLSRDLPYKLTPND---VFVTSGCTQAI-----DVAMALLSRPGAN 126
P L ++ + + +Y+ R++ P++ +F G T A+ + + L + G
Sbjct: 137 PPRMLNISEKIVRQYIIREMGADAIPSESVNLFAVEGGTAAMAYIFESMKVNGLLKAGDK 196
Query: 127 ILLPRPGF-PIYELSAAFRH-IEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGN 184
+ + P F P E+ ++ +E + P W+ +++ L D +NP N
Sbjct: 197 VAIGMPVFTPYIEIPELAQYALEEVAINADPALNWQYPDSELDKLKDPAIKIFFCVNPSN 256
Query: 185 PCGNVYSYQHLQKLAE--TANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGS 242
P + L+++ + ++ +++ D+VYG G + + L + S
Sbjct: 257 PPSVKMDERSLERVRKIVAEHRPDLMILTDDVYGTFADGFQSLFAI----CPANTLLVYS 312
Query: 243 LSKRWIVPGWRLG 255
SK + GWRLG
Sbjct: 313 FSKYFGATGWRLG 325
>pdb|2F8J|A Chain A, Crystal Structure Of Histidinol-phosphate Aminotransferase
(ec 2.6.1.9) (imidazole Acetol-phosphate Transferase)
(tm1040) From Thermotoga Maritima At 2.40 A Resolution
pdb|2F8J|B Chain B, Crystal Structure Of Histidinol-phosphate Aminotransferase
(ec 2.6.1.9) (imidazole Acetol-phosphate Transferase)
(tm1040) From Thermotoga Maritima At 2.40 A Resolution
pdb|2F8J|C Chain C, Crystal Structure Of Histidinol-phosphate Aminotransferase
(ec 2.6.1.9) (imidazole Acetol-phosphate Transferase)
(tm1040) From Thermotoga Maritima At 2.40 A Resolution
pdb|2F8J|D Chain D, Crystal Structure Of Histidinol-phosphate Aminotransferase
(ec 2.6.1.9) (imidazole Acetol-phosphate Transferase)
(tm1040) From Thermotoga Maritima At 2.40 A Resolution
Length = 347
Score = 34.7 bits (78), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 73/179 (40%), Gaps = 28/179 (15%)
Query: 86 IAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRH 145
I YL D L+ N+V V +G + I V M + R ++ P P + Y + A
Sbjct: 77 ILSYLDTDF---LSKNNVSVGNGADEIIYVMMLMFDR---SVFFP-PTYSCYRIFAK--- 126
Query: 146 IEVRHFDLLPDKGWEVDLDDIESLADQNT---VALVIINPGNPCGNVYSYQHLQKLAETA 202
+ K EV L + + N + I NP NP G+V+ + ++++ +T
Sbjct: 127 -------AVGAKFLEVPLTKDLRIPEVNVGEGDVVFIPNPNNPTGHVFEREEIERILKTG 179
Query: 203 NKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTD 261
V DE Y F + +V + + + SK + + R+G+ V ++
Sbjct: 180 ----AFVALDEAYYE--FHGESYVDF--LKKYENLAVIRTFSKAFSLAAQRVGYVVASE 230
>pdb|1UU1|A Chain A, Complex Of Histidinol-Phosphate Aminotransferase (Hisc)
From Thermotoga Maritima (Apo-Form)
pdb|1UU1|B Chain B, Complex Of Histidinol-Phosphate Aminotransferase (Hisc)
From Thermotoga Maritima (Apo-Form)
pdb|1UU1|C Chain C, Complex Of Histidinol-Phosphate Aminotransferase (Hisc)
From Thermotoga Maritima (Apo-Form)
pdb|1UU1|D Chain D, Complex Of Histidinol-Phosphate Aminotransferase (Hisc)
From Thermotoga Maritima (Apo-Form)
pdb|1UU2|A Chain A, Histidinol-Phosphate Aminotransferase (Hisc) From
Thermotoga Maritima (Apo-Form)
pdb|1UU2|B Chain B, Histidinol-Phosphate Aminotransferase (Hisc) From
Thermotoga Maritima (Apo-Form)
pdb|1UU0|A Chain A, Histidinol-Phosphate Aminotransferase (Hisc) From
Thermotoga Maritima (Apo-Form)
pdb|1UU0|B Chain B, Histidinol-Phosphate Aminotransferase (Hisc) From
Thermotoga Maritima (Apo-Form)
pdb|1UU0|C Chain C, Histidinol-Phosphate Aminotransferase (Hisc) From
Thermotoga Maritima (Apo-Form)
pdb|1UU0|D Chain D, Histidinol-Phosphate Aminotransferase (Hisc) From
Thermotoga Maritima (Apo-Form)
Length = 335
Score = 34.7 bits (78), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 73/179 (40%), Gaps = 28/179 (15%)
Query: 86 IAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRH 145
I YL D L+ N+V V +G + I V M + R ++ P P + Y + A
Sbjct: 65 ILSYLDTDF---LSKNNVSVGNGADEIIYVMMLMFDR---SVFFP-PTYSCYRIFAK--- 114
Query: 146 IEVRHFDLLPDKGWEVDLDDIESLADQNT---VALVIINPGNPCGNVYSYQHLQKLAETA 202
+ K EV L + + N + I NP NP G+V+ + ++++ +T
Sbjct: 115 -------AVGAKFLEVPLTKDLRIPEVNVGEGDVVFIPNPNNPTGHVFEREEIERILKTG 167
Query: 203 NKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTD 261
V DE Y F + +V + + + SK + + R+G+ V ++
Sbjct: 168 ----AFVALDEAYYE--FHGESYVDF--LKKYENLAVIRTFSKAFSLAAQRVGYVVASE 218
>pdb|3MC6|C Chain C, Crystal Structure Of Scdpl1
Length = 497
Score = 33.9 bits (76), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 127 ILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPC 186
I+ P ++ +A + +++RH +L P ++VDL ++ ++NTV LV P P
Sbjct: 161 IIAPVTAHAGFDKAAYYFGMKLRHVELDPTT-YQVDLGKVKKFINKNTVLLVGSAPNFPH 219
Query: 187 GNVYSYQHLQKLAE 200
G + L K+A+
Sbjct: 220 GIADDIEGLGKIAQ 233
>pdb|3MC6|A Chain A, Crystal Structure Of Scdpl1
Length = 497
Score = 33.9 bits (76), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 127 ILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPC 186
I+ P ++ +A + +++RH +L P ++VDL ++ ++NTV LV P P
Sbjct: 161 IIAPVTAHAGFDKAAYYFGMKLRHVELDPTT-YQVDLGKVKKFINKNTVLLVGSAPNFPH 219
Query: 187 GNVYSYQHLQKLAE 200
G + L K+A+
Sbjct: 220 GIADDIEGLGKIAQ 233
>pdb|3P1T|A Chain A, Crystal Structure Of A Putative Aminotransferase
(Bpsl1724) From Burkholderia Pseudomallei K96243 At 2.60
A Resolution
pdb|3P1T|B Chain B, Crystal Structure Of A Putative Aminotransferase
(Bpsl1724) From Burkholderia Pseudomallei K96243 At 2.60
A Resolution
pdb|3P1T|C Chain C, Crystal Structure Of A Putative Aminotransferase
(Bpsl1724) From Burkholderia Pseudomallei K96243 At 2.60
A Resolution
pdb|3P1T|D Chain D, Crystal Structure Of A Putative Aminotransferase
(Bpsl1724) From Burkholderia Pseudomallei K96243 At 2.60
A Resolution
Length = 337
Score = 33.5 bits (75), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 75/189 (39%), Gaps = 26/189 (13%)
Query: 69 KFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPND-VFVTSGCTQAIDVAMALLSRPGANI 127
+ N Y P P R +AE+ S P D + + G + D A S
Sbjct: 44 RINRY-PFDAEPRVXRKLAEHFS-------CPEDNLXLVRGIDECFDRISAEFS--SXRF 93
Query: 128 LLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCG 187
+ PGF Y A + RHF++ +D +D+ ++ + V V+ NP NP G
Sbjct: 94 VTAWPGFDGYRARIAVSGL--RHFEIGLTDDLLLDPNDLAQVSRDDCV--VLANPSNPTG 149
Query: 188 NVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGV-FGSTVPILTLGSLSKR 246
S L +L + A KL + DE Y F G+ +G L S SK
Sbjct: 150 QALSAGELDQLRQRAGKL----LIDETYVDY----SSFRARGLAYGENE--LVFRSFSKS 199
Query: 247 WIVPGWRLG 255
+ + G RLG
Sbjct: 200 YGLAGLRLG 208
>pdb|2J5I|A Chain A, Crystal Structure Of Hydroxycinnamoyl-Coa Hydratase-Lyase
Length = 276
Score = 31.6 bits (70), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 36/76 (47%), Gaps = 7/76 (9%)
Query: 165 DIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKP 224
D+ AD+ T L IN G P GN+ S + +A+T ++L+ + FG +
Sbjct: 129 DLAICADEATFGLSEINWGIPPGNLVS----KAMADTVGHRQSLMY---IMTGKTFGGQK 181
Query: 225 FVPMGVFGSTVPILTL 240
MG+ +VP+ L
Sbjct: 182 AAEMGLVNESVPLAQL 197
>pdb|2VSS|F Chain F, Wild-Type Hydroxycinnamoyl-Coa Hydratase Lyase In Complex
With Acetyl-Coa And Vanillin
Length = 276
Score = 30.8 bits (68), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 35/76 (46%), Gaps = 7/76 (9%)
Query: 165 DIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKP 224
D+ AD+ T L IN G P GN+ S + +A+T ++L + FG +
Sbjct: 129 DLAICADEATFGLSEINWGIPPGNLVS----KAMADTVGHRQSLYY---IMTGKTFGGQK 181
Query: 225 FVPMGVFGSTVPILTL 240
MG+ +VP+ L
Sbjct: 182 AAEMGLVNESVPLAQL 197
>pdb|2VSU|F Chain F, A Ternary Complex Of Hydroxycinnamoyl-Coa Hydratase-Lyase
( Hchl) With Acetyl-Coenzyme A And Vanillin Gives
Insights Into Substrate Specificity And Mechanism
Length = 276
Score = 30.8 bits (68), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 35/76 (46%), Gaps = 7/76 (9%)
Query: 165 DIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKP 224
D+ AD+ T L IN G P GN+ S + +A+T ++L + FG +
Sbjct: 129 DLAICADEATFGLSEINWGIPPGNLVS----KAMADTVGHRQSLYY---IMTGKTFGGQK 181
Query: 225 FVPMGVFGSTVPILTL 240
MG+ +VP+ L
Sbjct: 182 AAEMGLVNESVPLAQL 197
>pdb|1H1C|A Chain A, Histidinol-Phosphate Aminotransferase (Hisc) From
Thermotoga Maritima
pdb|1H1C|B Chain B, Histidinol-Phosphate Aminotransferase (Hisc) From
Thermotoga Maritima
pdb|1H1C|C Chain C, Histidinol-Phosphate Aminotransferase (Hisc) From
Thermotoga Maritima
pdb|1H1C|D Chain D, Histidinol-Phosphate Aminotransferase (Hisc) From
Thermotoga Maritima
Length = 335
Score = 30.8 bits (68), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/85 (22%), Positives = 39/85 (45%), Gaps = 8/85 (9%)
Query: 177 LVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVP 236
+ I NP NP G+V+ + ++++ +T V DE Y F + +V
Sbjct: 142 VFIPNPNNPTGHVFEREEIERILKTG----AFVALDEAYYE--FHGESYVDF--LKKYEN 193
Query: 237 ILTLGSLSKRWIVPGWRLGWFVTTD 261
+ + + SK + + R+G+ V ++
Sbjct: 194 LAVIRTFSKAFSLAAQRVGYVVASE 218
>pdb|2VSU|E Chain E, A Ternary Complex Of Hydroxycinnamoyl-Coa Hydratase-Lyase
( Hchl) With Acetyl-Coenzyme A And Vanillin Gives
Insights Into Substrate Specificity And Mechanism
Length = 276
Score = 30.8 bits (68), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 35/76 (46%), Gaps = 7/76 (9%)
Query: 165 DIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKP 224
D+ AD+ T L IN G P GN+ S + +A+T ++L + FG +
Sbjct: 129 DLAICADEATFGLSEINYGIPPGNLVS----KAMADTVGHRQSLYY---IMTGKTFGGQK 181
Query: 225 FVPMGVFGSTVPILTL 240
MG+ +VP+ L
Sbjct: 182 AAEMGLVNESVPLAQL 197
>pdb|2VSS|E Chain E, Wild-Type Hydroxycinnamoyl-Coa Hydratase Lyase In Complex
With Acetyl-Coa And Vanillin
Length = 276
Score = 30.8 bits (68), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 35/76 (46%), Gaps = 7/76 (9%)
Query: 165 DIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKP 224
D+ AD+ T L IN G P GN+ S + +A+T ++L + FG +
Sbjct: 129 DLAICADEATFGLSEINYGIPPGNLVS----KAMADTVGHRQSLYY---IMTGKTFGGQK 181
Query: 225 FVPMGVFGSTVPILTL 240
MG+ +VP+ L
Sbjct: 182 AAEMGLVNESVPLAQL 197
>pdb|2J5I|I Chain I, Crystal Structure Of Hydroxycinnamoyl-Coa Hydratase-Lyase
Length = 276
Score = 30.8 bits (68), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 35/76 (46%), Gaps = 7/76 (9%)
Query: 165 DIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKP 224
D+ AD+ T L IN G P GN+ S + +A+T ++L + FG +
Sbjct: 129 DLAICADEATFGLSEINWGIPPGNLVS----KAMADTVGHRQSLYY---IMTGKTFGGQK 181
Query: 225 FVPMGVFGSTVPILTL 240
MG+ +VP+ L
Sbjct: 182 AAEMGLVNESVPLAQL 197
>pdb|2J5I|B Chain B, Crystal Structure Of Hydroxycinnamoyl-Coa Hydratase-Lyase
pdb|2J5I|C Chain C, Crystal Structure Of Hydroxycinnamoyl-Coa Hydratase-Lyase
pdb|2J5I|D Chain D, Crystal Structure Of Hydroxycinnamoyl-Coa Hydratase-Lyase
pdb|2J5I|E Chain E, Crystal Structure Of Hydroxycinnamoyl-Coa Hydratase-Lyase
pdb|2J5I|F Chain F, Crystal Structure Of Hydroxycinnamoyl-Coa Hydratase-Lyase
pdb|2J5I|G Chain G, Crystal Structure Of Hydroxycinnamoyl-Coa Hydratase-Lyase
pdb|2J5I|H Chain H, Crystal Structure Of Hydroxycinnamoyl-Coa Hydratase-Lyase
pdb|2J5I|J Chain J, Crystal Structure Of Hydroxycinnamoyl-Coa Hydratase-Lyase
pdb|2J5I|K Chain K, Crystal Structure Of Hydroxycinnamoyl-Coa Hydratase-Lyase
pdb|2J5I|L Chain L, Crystal Structure Of Hydroxycinnamoyl-Coa Hydratase-Lyase
pdb|2VSS|A Chain A, Wild-Type Hydroxycinnamoyl-Coa Hydratase Lyase In Complex
With Acetyl-Coa And Vanillin
pdb|2VSS|B Chain B, Wild-Type Hydroxycinnamoyl-Coa Hydratase Lyase In Complex
With Acetyl-Coa And Vanillin
pdb|2VSS|C Chain C, Wild-Type Hydroxycinnamoyl-Coa Hydratase Lyase In Complex
With Acetyl-Coa And Vanillin
pdb|2VSS|D Chain D, Wild-Type Hydroxycinnamoyl-Coa Hydratase Lyase In Complex
With Acetyl-Coa And Vanillin
Length = 276
Score = 30.8 bits (68), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 35/76 (46%), Gaps = 7/76 (9%)
Query: 165 DIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKP 224
D+ AD+ T L IN G P GN+ S + +A+T ++L + FG +
Sbjct: 129 DLAICADEATFGLSEINWGIPPGNLVS----KAMADTVGHRQSLYY---IMTGKTFGGQK 181
Query: 225 FVPMGVFGSTVPILTL 240
MG+ +VP+ L
Sbjct: 182 AAEMGLVNESVPLAQL 197
>pdb|2VSU|A Chain A, A Ternary Complex Of Hydroxycinnamoyl-Coa Hydratase-Lyase
( Hchl) With Acetyl-Coenzyme A And Vanillin Gives
Insights Into Substrate Specificity And Mechanism.
pdb|2VSU|B Chain B, A Ternary Complex Of Hydroxycinnamoyl-Coa Hydratase-Lyase
( Hchl) With Acetyl-Coenzyme A And Vanillin Gives
Insights Into Substrate Specificity And Mechanism.
pdb|2VSU|D Chain D, A Ternary Complex Of Hydroxycinnamoyl-Coa Hydratase-Lyase
( Hchl) With Acetyl-Coenzyme A And Vanillin Gives
Insights Into Substrate Specificity And Mechanism
Length = 276
Score = 30.8 bits (68), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 35/76 (46%), Gaps = 7/76 (9%)
Query: 165 DIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKP 224
D+ AD+ T L IN G P GN+ S + +A+T ++L + FG +
Sbjct: 129 DLAICADEATFGLSEINWGIPPGNLVS----KAMADTVGHRQSLYY---IMTGKTFGGQK 181
Query: 225 FVPMGVFGSTVPILTL 240
MG+ +VP+ L
Sbjct: 182 AAEMGLVNESVPLAQL 197
>pdb|2VSU|C Chain C, A Ternary Complex Of Hydroxycinnamoyl-Coa Hydratase-Lyase
( Hchl) With Acetyl-Coenzyme A And Vanillin Gives
Insights Into Substrate Specificity And Mechanism
Length = 275
Score = 30.8 bits (68), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 35/76 (46%), Gaps = 7/76 (9%)
Query: 165 DIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKP 224
D+ AD+ T L IN G P GN+ S + +A+T ++L + FG +
Sbjct: 129 DLAICADEATFGLSEINWGIPPGNLVS----KAMADTVGHRQSLYY---IMTGKTFGGQK 181
Query: 225 FVPMGVFGSTVPILTL 240
MG+ +VP+ L
Sbjct: 182 AAEMGLVNESVPLAQL 197
>pdb|2NXW|A Chain A, Crystal Structure Of Phenylpyruvate Decarboxylase Of
Azospirillum Brasilense
pdb|2NXW|B Chain B, Crystal Structure Of Phenylpyruvate Decarboxylase Of
Azospirillum Brasilense
pdb|2Q5J|A Chain A, X-Ray Structure Of Phenylpyruvate Decarboxylase In Complex
With 3- Deaza-Thdp
pdb|2Q5J|B Chain B, X-Ray Structure Of Phenylpyruvate Decarboxylase In Complex
With 3- Deaza-Thdp
pdb|2Q5L|A Chain A, X-Ray Structure Of Phenylpyruvate Decarboxylase In Complex
With 2-(1- Hydroxyethyl)-3-Deaza-Thdp
pdb|2Q5L|B Chain B, X-Ray Structure Of Phenylpyruvate Decarboxylase In Complex
With 2-(1- Hydroxyethyl)-3-Deaza-Thdp
pdb|2Q5O|A Chain A, X-Ray Structure Of Phenylpyruvate Decarboxylase In Complex
With 3- Deaza-Thdp And Phenylpyruvate
pdb|2Q5O|B Chain B, X-Ray Structure Of Phenylpyruvate Decarboxylase In Complex
With 3- Deaza-Thdp And Phenylpyruvate
pdb|2Q5Q|A Chain A, X-Ray Structure Of Phenylpyruvate Decarboxylase In Complex
With 3- Deaza-Thdp And 5-Phenyl-2-Oxo-Valeric Acid
pdb|2Q5Q|B Chain B, X-Ray Structure Of Phenylpyruvate Decarboxylase In Complex
With 3- Deaza-Thdp And 5-Phenyl-2-Oxo-Valeric Acid
Length = 565
Score = 30.4 bits (67), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 35/80 (43%), Gaps = 7/80 (8%)
Query: 156 DKGWEVDLDDIESLADQNTVALVIINPGNP----CGNVYSYQHLQKLAETANKLKTLVIA 211
D W VD D + + AD+ A+ + +P C V Y K+AE A +L V+
Sbjct: 198 DPAWPVDRDALAACADEVLAAMR--SATSPVLMVCVEVRRYGLEAKVAELAQRLGVPVVT 255
Query: 212 DEVYGHLVFGDKPFVPMGVF 231
G + D P P+G +
Sbjct: 256 -TFMGRGLLADAPTPPLGTY 274
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.322 0.139 0.425
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,710,602
Number of Sequences: 62578
Number of extensions: 459519
Number of successful extensions: 1194
Number of sequences better than 100.0: 103
Number of HSP's better than 100.0 without gapping: 73
Number of HSP's successfully gapped in prelim test: 30
Number of HSP's that attempted gapping in prelim test: 1015
Number of HSP's gapped (non-prelim): 110
length of query: 415
length of database: 14,973,337
effective HSP length: 101
effective length of query: 314
effective length of database: 8,652,959
effective search space: 2717029126
effective search space used: 2717029126
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 53 (25.0 bits)