Query 014936
Match_columns 415
No_of_seqs 173 out of 2194
Neff 10.4
Searched_HMMs 46136
Date Fri Mar 29 01:31:21 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014936.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/014936hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0259 Tyrosine aminotransfer 100.0 3E-64 6.5E-69 435.4 41.0 400 12-412 39-438 (447)
2 COG0436 Aspartate/tyrosine/aro 100.0 7.4E-60 1.6E-64 439.7 43.0 357 35-408 28-392 (393)
3 PLN00145 tyrosine/nicotianamin 100.0 6.2E-59 1.3E-63 442.4 44.4 397 15-411 32-428 (430)
4 PLN02656 tyrosine transaminase 100.0 2.6E-58 5.5E-63 437.3 44.6 397 14-410 10-406 (409)
5 PLN02187 rooty/superroot1 100.0 5.2E-58 1.1E-62 438.7 44.5 394 15-412 47-443 (462)
6 PLN00143 tyrosine/nicotianamin 100.0 4E-57 8.7E-62 428.8 45.2 402 8-410 6-407 (409)
7 PTZ00433 tyrosine aminotransfe 100.0 2.4E-54 5.2E-59 410.8 43.3 387 16-409 18-410 (412)
8 PRK13355 bifunctional HTH-doma 100.0 3.2E-54 7E-59 419.9 43.3 394 2-408 118-515 (517)
9 TIGR01265 tyr_nico_aTase tyros 100.0 8.7E-54 1.9E-58 406.1 44.4 389 15-408 14-402 (403)
10 PRK07681 aspartate aminotransf 100.0 7.8E-54 1.7E-58 406.1 41.5 378 1-404 3-385 (399)
11 TIGR01264 tyr_amTase_E tyrosin 100.0 1.5E-53 3.2E-58 404.8 43.3 370 34-407 30-399 (401)
12 PRK07366 succinyldiaminopimela 100.0 9.7E-54 2.1E-58 404.5 40.6 353 33-404 28-387 (388)
13 PRK06207 aspartate aminotransf 100.0 3.2E-53 6.8E-58 401.6 42.9 359 34-409 38-404 (405)
14 PLN00175 aminotransferase fami 100.0 2.4E-53 5.2E-58 402.8 41.9 352 34-406 53-412 (413)
15 PRK06855 aminotransferase; Val 100.0 6.6E-53 1.4E-57 402.2 41.8 373 33-408 30-430 (433)
16 PRK08960 hypothetical protein; 100.0 1.1E-52 2.3E-57 397.0 42.1 378 3-406 5-386 (387)
17 PRK06107 aspartate aminotransf 100.0 8.1E-53 1.7E-57 399.3 41.3 388 1-408 4-401 (402)
18 PRK08068 transaminase; Reviewe 100.0 1.2E-52 2.5E-57 397.0 41.3 378 2-404 4-386 (389)
19 PRK09276 LL-diaminopimelate am 100.0 2.2E-52 4.7E-57 395.1 41.9 350 34-403 30-384 (385)
20 TIGR03540 DapC_direct LL-diami 100.0 2.8E-52 6.1E-57 394.1 42.3 351 33-403 27-382 (383)
21 PRK09148 aminotransferase; Val 100.0 8E-52 1.7E-56 392.3 44.0 390 1-412 1-395 (405)
22 PRK07337 aminotransferase; Val 100.0 6.7E-52 1.4E-56 392.0 41.7 383 1-405 1-387 (388)
23 PRK08636 aspartate aminotransf 100.0 1.1E-51 2.3E-56 391.8 42.4 359 33-408 31-401 (403)
24 PRK09147 succinyldiaminopimela 100.0 1.3E-51 2.9E-56 390.7 41.2 348 33-406 27-395 (396)
25 PRK06348 aspartate aminotransf 100.0 1E-51 2.2E-56 389.7 40.2 350 35-404 29-382 (384)
26 PTZ00377 alanine aminotransfer 100.0 7.5E-52 1.6E-56 400.2 39.8 373 34-412 45-480 (481)
27 PRK05942 aspartate aminotransf 100.0 1.9E-51 4.2E-56 389.1 41.7 352 33-404 33-389 (394)
28 PRK05764 aspartate aminotransf 100.0 3.3E-51 7.2E-56 388.5 42.8 387 1-407 2-391 (393)
29 PLN02607 1-aminocyclopropane-1 100.0 1.5E-51 3.3E-56 391.7 39.7 395 2-411 12-441 (447)
30 KOG0257 Kynurenine aminotransf 100.0 1.9E-52 4.1E-57 368.9 29.6 349 40-402 36-414 (420)
31 PRK05957 aspartate aminotransf 100.0 1.7E-50 3.8E-55 381.7 42.5 356 35-410 27-388 (389)
32 PRK07324 transaminase; Validat 100.0 5E-51 1.1E-55 382.7 38.4 363 17-408 8-371 (373)
33 PRK09265 aminotransferase AlaT 100.0 1.8E-50 3.9E-55 383.8 42.6 370 32-408 30-402 (404)
34 PRK08363 alanine aminotransfer 100.0 1.2E-50 2.6E-55 384.4 41.3 362 33-408 28-395 (398)
35 PRK07682 hypothetical protein; 100.0 5.7E-51 1.2E-55 384.5 38.6 352 35-407 20-376 (378)
36 PLN02450 1-aminocyclopropane-1 100.0 8.4E-51 1.8E-55 389.6 38.8 368 27-409 30-432 (468)
37 PRK06290 aspartate aminotransf 100.0 2.9E-50 6.2E-55 380.7 41.8 355 34-408 43-406 (410)
38 PLN02376 1-aminocyclopropane-1 100.0 1.8E-50 3.8E-55 388.4 40.7 379 16-409 26-440 (496)
39 PRK08361 aspartate aminotransf 100.0 1.1E-50 2.5E-55 383.7 38.0 355 34-407 32-390 (391)
40 PRK07568 aspartate aminotransf 100.0 7.1E-50 1.5E-54 379.9 43.2 383 1-410 1-395 (397)
41 PRK06108 aspartate aminotransf 100.0 3.5E-50 7.5E-55 380.3 40.5 353 34-406 23-381 (382)
42 PRK12414 putative aminotransfe 100.0 3.1E-50 6.6E-55 379.4 39.6 349 34-403 28-383 (384)
43 COG1168 MalY Bifunctional PLP- 100.0 2.6E-50 5.7E-55 351.9 35.9 355 33-407 23-386 (388)
44 TIGR03538 DapC_gpp succinyldia 100.0 4.6E-50 1E-54 379.8 40.2 346 33-404 26-392 (393)
45 PRK07550 hypothetical protein; 100.0 8.4E-50 1.8E-54 377.4 41.7 378 3-404 2-384 (386)
46 PRK07590 L,L-diaminopimelate a 100.0 9.5E-50 2E-54 379.2 40.2 345 34-404 33-408 (409)
47 PRK07683 aminotransferase A; V 100.0 2.6E-49 5.6E-54 373.5 41.5 352 34-407 27-383 (387)
48 PRK08912 hypothetical protein; 100.0 1.5E-49 3.3E-54 375.7 40.0 355 34-407 25-386 (387)
49 PRK07309 aromatic amino acid a 100.0 3.6E-49 7.8E-54 373.0 40.5 353 35-408 30-389 (391)
50 PRK09082 methionine aminotrans 100.0 1.4E-49 3.1E-54 375.3 37.3 350 34-403 29-385 (386)
51 PLN02231 alanine transaminase 100.0 2.5E-49 5.4E-54 382.3 39.7 366 35-412 129-532 (534)
52 PRK05839 hypothetical protein; 100.0 9.2E-49 2E-53 367.8 39.9 338 34-406 23-373 (374)
53 PRK07777 aminotransferase; Val 100.0 1.9E-48 4.2E-53 368.2 41.8 353 34-405 23-384 (387)
54 TIGR03537 DapC succinyldiamino 100.0 8.6E-49 1.9E-53 365.4 38.5 341 37-403 2-349 (350)
55 COG1167 ARO8 Transcriptional r 100.0 8.8E-49 1.9E-53 373.5 37.7 355 35-409 89-457 (459)
56 PRK08175 aminotransferase; Val 100.0 2.6E-48 5.6E-53 367.9 40.0 355 33-407 27-389 (395)
57 TIGR03542 DAPAT_plant LL-diami 100.0 6.1E-48 1.3E-52 366.0 39.8 344 33-404 31-401 (402)
58 PRK07865 N-succinyldiaminopime 100.0 4E-47 8.7E-52 356.3 39.4 355 1-402 1-363 (364)
59 PRK06836 aspartate aminotransf 100.0 6.9E-47 1.5E-51 357.8 41.2 380 4-408 3-392 (394)
60 PRK09275 aspartate aminotransf 100.0 5.2E-47 1.1E-51 360.8 37.5 390 6-412 68-522 (527)
61 PRK15481 transcriptional regul 100.0 3.3E-47 7.2E-52 364.2 36.0 339 34-406 84-430 (431)
62 PF00155 Aminotran_1_2: Aminot 100.0 3.3E-48 7.3E-53 364.5 25.7 349 36-401 2-363 (363)
63 PRK09257 aromatic amino acid a 100.0 5.7E-47 1.2E-51 358.9 34.0 348 35-404 26-395 (396)
64 PRK06225 aspartate aminotransf 100.0 6.3E-46 1.4E-50 350.2 39.8 350 33-410 26-379 (380)
65 PRK09440 avtA valine--pyruvate 100.0 1.9E-46 4E-51 358.1 36.1 384 1-410 1-414 (416)
66 PTZ00376 aspartate aminotransf 100.0 2.2E-46 4.7E-51 355.3 34.9 347 34-406 28-402 (404)
67 PRK14809 histidinol-phosphate 100.0 3.6E-46 7.7E-51 348.9 35.8 328 34-406 29-356 (357)
68 PLN02672 methionine S-methyltr 100.0 6.3E-46 1.4E-50 373.3 38.3 355 33-406 695-1079(1082)
69 TIGR03539 DapC_actino succinyl 100.0 2.1E-45 4.6E-50 343.3 38.5 331 32-401 18-356 (357)
70 PRK01533 histidinol-phosphate 100.0 2.2E-46 4.7E-51 349.6 31.7 328 34-407 28-355 (366)
71 PLN02368 alanine transaminase 100.0 9.9E-47 2.1E-51 354.0 29.1 309 33-347 36-397 (407)
72 PRK02610 histidinol-phosphate 100.0 1E-45 2.2E-50 347.4 35.9 335 36-407 29-371 (374)
73 PRK06358 threonine-phosphate d 100.0 1.8E-45 3.8E-50 343.0 36.9 333 35-405 19-353 (354)
74 PRK03158 histidinol-phosphate 100.0 6.6E-46 1.4E-50 347.8 33.1 331 34-404 28-358 (359)
75 TIGR03801 asp_4_decarbox aspar 100.0 1.8E-45 3.9E-50 349.8 35.1 386 7-410 63-519 (521)
76 KOG0256 1-aminocyclopropane-1- 100.0 1.6E-45 3.6E-50 322.0 29.5 373 28-412 66-466 (471)
77 PRK05166 histidinol-phosphate 100.0 1.3E-44 2.9E-49 339.7 35.3 331 34-401 35-368 (371)
78 PRK08056 threonine-phosphate d 100.0 2.3E-44 5E-49 336.2 36.5 333 34-405 19-353 (356)
79 PRK07392 threonine-phosphate d 100.0 2.8E-44 6E-49 336.4 35.8 329 34-401 21-356 (360)
80 PLN03026 histidinol-phosphate 100.0 3.5E-44 7.5E-49 337.0 35.0 327 34-403 51-378 (380)
81 PLN02397 aspartate transaminas 100.0 6.9E-44 1.5E-48 338.9 36.0 345 34-406 47-420 (423)
82 COG0079 HisC Histidinol-phosph 100.0 1.1E-43 2.4E-48 325.1 35.1 333 34-407 21-354 (356)
83 PRK02731 histidinol-phosphate 100.0 9.8E-44 2.1E-48 334.2 35.6 335 34-406 31-365 (367)
84 PRK03317 histidinol-phosphate 100.0 6.7E-44 1.5E-48 335.0 33.9 335 36-407 27-364 (368)
85 PRK04870 histidinol-phosphate 100.0 6.7E-44 1.5E-48 333.6 33.0 327 34-404 25-355 (356)
86 PRK08153 histidinol-phosphate 100.0 3.4E-43 7.4E-48 329.5 36.5 333 36-409 33-367 (369)
87 PRK08637 hypothetical protein; 100.0 4.3E-43 9.2E-48 331.3 35.8 356 37-408 5-387 (388)
88 PRK05387 histidinol-phosphate 100.0 2.6E-43 5.7E-48 329.7 33.9 328 34-406 23-352 (353)
89 PRK09105 putative aminotransfe 100.0 5.1E-43 1.1E-47 327.7 35.0 324 35-405 43-368 (370)
90 PRK14807 histidinol-phosphate 100.0 1.4E-42 3E-47 323.6 35.6 325 36-404 23-349 (351)
91 PRK04781 histidinol-phosphate 100.0 2.4E-42 5.3E-47 322.9 35.2 325 36-404 32-360 (364)
92 PRK01688 histidinol-phosphate 100.0 5E-43 1.1E-47 326.1 29.2 321 35-401 28-350 (351)
93 TIGR01141 hisC histidinol-phos 100.0 1.7E-42 3.6E-47 323.3 31.8 327 34-401 18-345 (346)
94 PRK07908 hypothetical protein; 100.0 1.4E-41 3E-46 317.0 36.9 324 34-406 21-346 (349)
95 PRK03321 putative aminotransfe 100.0 1.6E-41 3.5E-46 317.2 31.9 329 35-406 22-350 (352)
96 PRK04635 histidinol-phosphate 100.0 1.5E-41 3.2E-46 317.0 29.9 320 35-403 31-351 (354)
97 PRK06425 histidinol-phosphate 100.0 5.2E-41 1.1E-45 310.4 32.7 313 36-405 17-331 (332)
98 PRK00950 histidinol-phosphate 100.0 6.2E-41 1.3E-45 314.7 33.2 325 34-405 33-360 (361)
99 PRK14808 histidinol-phosphate 100.0 8.1E-41 1.8E-45 308.8 32.7 317 33-403 17-333 (335)
100 PRK03967 histidinol-phosphate 100.0 4.7E-40 1E-44 304.4 33.5 316 34-405 17-332 (337)
101 PRK06959 putative threonine-ph 100.0 2.3E-40 4.9E-45 306.1 31.3 310 35-409 24-335 (339)
102 PRK05664 threonine-phosphate d 100.0 9E-40 2E-44 301.7 35.2 307 35-406 20-327 (330)
103 TIGR01140 L_thr_O3P_dcar L-thr 100.0 6.3E-40 1.4E-44 302.9 30.3 311 34-401 16-329 (330)
104 PRK08354 putative aminotransfe 100.0 6.5E-39 1.4E-43 293.7 35.2 301 33-400 6-308 (311)
105 KOG0634 Aromatic amino acid am 100.0 7.9E-39 1.7E-43 282.5 28.1 329 71-411 94-470 (472)
106 cd00609 AAT_like Aspartate ami 100.0 1.8E-36 3.9E-41 283.7 39.0 346 38-402 1-349 (350)
107 PRK13238 tnaA tryptophanase/L- 100.0 7.6E-35 1.6E-39 277.0 33.4 345 33-407 34-433 (460)
108 COG3977 Alanine-alpha-ketoisov 100.0 7.2E-34 1.6E-38 239.2 30.9 381 1-410 1-414 (417)
109 TIGR03576 pyridox_MJ0158 pyrid 100.0 2.6E-33 5.7E-38 258.2 33.2 309 48-405 29-345 (346)
110 PLN02822 serine palmitoyltrans 100.0 8.5E-34 1.8E-38 272.3 30.7 348 33-409 107-479 (481)
111 KOG0258 Alanine aminotransfera 100.0 4.3E-33 9.4E-38 242.5 27.7 348 55-411 89-473 (475)
112 TIGR01822 2am3keto_CoA 2-amino 100.0 8.2E-32 1.8E-36 255.8 33.2 331 33-407 36-389 (393)
113 PRK10874 cysteine sulfinate de 100.0 1.2E-31 2.7E-36 255.0 33.1 333 35-408 18-399 (401)
114 TIGR03392 FeS_syn_CsdA cystein 100.0 1.9E-31 4.1E-36 253.4 33.8 333 35-408 15-396 (398)
115 TIGR00858 bioF 8-amino-7-oxono 100.0 1.3E-31 2.8E-36 251.8 30.8 328 32-402 13-360 (360)
116 PRK06939 2-amino-3-ketobutyrat 100.0 2.9E-31 6.2E-36 252.7 32.5 337 33-408 40-394 (397)
117 PRK13392 5-aminolevulinate syn 100.0 4.8E-31 1E-35 251.2 31.4 332 34-407 45-397 (410)
118 PLN02483 serine palmitoyltrans 100.0 9.7E-31 2.1E-35 251.7 32.2 337 33-409 98-468 (489)
119 TIGR01825 gly_Cac_T_rel pyrido 100.0 2E-30 4.2E-35 245.7 33.1 335 33-407 31-381 (385)
120 TIGR01979 sufS cysteine desulf 100.0 3.6E-30 7.9E-35 245.2 34.1 334 34-408 16-402 (403)
121 KOG0633 Histidinol phosphate a 100.0 1.4E-31 3.1E-36 221.1 20.6 287 97-403 83-373 (375)
122 PRK09295 bifunctional cysteine 100.0 3.4E-30 7.3E-35 245.2 33.2 332 35-406 22-403 (406)
123 PRK05958 8-amino-7-oxononanoat 100.0 3E-30 6.4E-35 244.8 32.7 333 33-404 37-384 (385)
124 PRK02627 acetylornithine amino 100.0 2.4E-30 5.3E-35 245.9 31.8 341 32-408 36-395 (396)
125 PLN02855 Bifunctional selenocy 100.0 8.4E-30 1.8E-34 243.7 34.8 336 34-409 30-420 (424)
126 cd00617 Tnase_like Tryptophana 100.0 4E-30 8.6E-35 241.2 31.8 347 33-407 9-408 (431)
127 TIGR01821 5aminolev_synth 5-am 100.0 6.5E-30 1.4E-34 242.9 32.9 333 34-408 44-397 (402)
128 PRK10534 L-threonine aldolase; 100.0 1.2E-30 2.6E-35 242.1 26.4 316 38-406 2-332 (333)
129 PRK07179 hypothetical protein; 100.0 2E-29 4.2E-34 239.9 33.8 332 33-408 52-399 (407)
130 PRK01278 argD acetylornithine 100.0 1.2E-29 2.5E-34 240.2 31.5 339 32-407 28-388 (389)
131 cd06451 AGAT_like Alanine-glyo 100.0 6.6E-30 1.4E-34 239.6 29.3 319 51-405 8-355 (356)
132 COG1448 TyrB Aspartate/tyrosin 100.0 8.2E-30 1.8E-34 223.6 27.7 357 16-404 12-395 (396)
133 TIGR02539 SepCysS Sep-tRNA:Cys 100.0 2E-29 4.2E-34 236.6 31.3 321 52-407 19-368 (370)
134 PRK09064 5-aminolevulinate syn 100.0 2.3E-29 4.9E-34 239.7 32.1 333 34-408 45-398 (407)
135 TIGR00707 argD acetylornithine 100.0 1E-29 2.2E-34 240.4 29.2 333 33-404 25-378 (379)
136 cd06502 TA_like Low-specificit 100.0 8.6E-30 1.9E-34 237.2 28.4 313 51-403 8-337 (338)
137 PLN02721 threonine aldolase 100.0 3E-29 6.4E-34 235.0 30.0 328 36-406 6-351 (353)
138 COG1104 NifS Cysteine sulfinat 100.0 4.4E-29 9.4E-34 223.6 28.6 331 51-411 11-381 (386)
139 cd06454 KBL_like KBL_like; thi 100.0 6.1E-29 1.3E-33 232.6 31.1 327 36-404 2-348 (349)
140 PRK03244 argD acetylornithine 100.0 2.3E-29 5.1E-34 239.0 28.1 334 32-408 40-395 (398)
141 COG0520 csdA Selenocysteine ly 100.0 2.3E-28 4.9E-33 227.9 32.0 333 34-406 20-404 (405)
142 PRK13393 5-aminolevulinate syn 100.0 3.5E-28 7.5E-33 231.2 33.2 333 34-408 44-397 (406)
143 cd00378 SHMT Serine-glycine hy 100.0 2.1E-28 4.6E-33 233.0 31.5 339 35-407 19-385 (402)
144 cd06452 SepCysS Sep-tRNA:Cys-t 100.0 2.7E-28 5.8E-33 228.6 31.6 322 51-405 11-360 (361)
145 TIGR01976 am_tr_V_VC1184 cyste 100.0 1.5E-28 3.2E-33 233.8 30.0 324 37-401 18-397 (397)
146 PRK02948 cysteine desulfurase; 100.0 9.6E-29 2.1E-33 233.6 28.1 325 51-409 10-376 (381)
147 cd06453 SufS_like Cysteine des 100.0 3.8E-28 8.3E-33 229.1 28.7 316 51-401 9-373 (373)
148 PRK07049 methionine gamma-lyas 100.0 1.8E-27 3.9E-32 225.3 33.1 230 70-335 77-320 (427)
149 COG0156 BioF 7-keto-8-aminopel 100.0 8.1E-28 1.8E-32 219.6 29.4 329 33-404 37-387 (388)
150 PRK09331 Sep-tRNA:Cys-tRNA syn 100.0 1.5E-27 3.3E-32 225.0 31.8 338 34-408 17-382 (387)
151 TIGR03403 nifS_epsilon cystein 100.0 2.7E-27 5.8E-32 223.7 32.6 331 51-409 9-377 (382)
152 TIGR03402 FeS_nifS cysteine de 100.0 1.9E-27 4.1E-32 224.6 30.8 326 51-410 9-375 (379)
153 TIGR01977 am_tr_V_EF2568 cyste 100.0 1.6E-27 3.5E-32 225.2 30.0 327 51-403 10-375 (376)
154 PLN02409 serine--glyoxylate am 100.0 3.3E-27 7.2E-32 223.5 31.5 325 51-408 18-373 (401)
155 PRK02936 argD acetylornithine 100.0 3.8E-27 8.2E-32 222.3 31.7 335 32-404 26-376 (377)
156 PF12897 Aminotran_MocR: Alani 100.0 4.3E-28 9.3E-33 213.2 21.7 366 16-407 5-415 (425)
157 TIGR03301 PhnW-AepZ 2-aminoeth 100.0 5.6E-27 1.2E-31 219.9 30.6 317 51-404 8-354 (355)
158 PRK05093 argD bifunctional N-s 100.0 6.4E-27 1.4E-31 222.1 30.7 336 32-408 37-401 (403)
159 PRK04073 rocD ornithine--oxo-a 100.0 6.6E-27 1.4E-31 221.5 29.4 327 33-405 38-395 (396)
160 cd00610 OAT_like Acetyl ornith 100.0 3.1E-27 6.7E-32 226.1 27.0 345 33-404 34-412 (413)
161 cd00613 GDC-P Glycine cleavage 100.0 9.1E-27 2E-31 221.7 30.0 330 34-401 19-398 (398)
162 PRK06234 methionine gamma-lyas 100.0 2E-26 4.4E-31 217.1 28.8 289 72-407 60-397 (400)
163 PLN03227 serine palmitoyltrans 100.0 3E-26 6.4E-31 215.6 29.8 338 38-409 1-384 (392)
164 TIGR02006 IscS cysteine desulf 100.0 6.5E-26 1.4E-30 215.3 31.8 337 38-409 5-379 (402)
165 PRK12381 bifunctional succinyl 100.0 5.1E-26 1.1E-30 215.7 30.6 345 32-411 36-403 (406)
166 PRK08247 cystathionine gamma-s 100.0 9.6E-26 2.1E-30 210.6 31.2 290 70-407 46-364 (366)
167 PRK13479 2-aminoethylphosphona 100.0 5E-26 1.1E-30 214.1 29.2 320 51-408 14-364 (368)
168 PRK13520 L-tyrosine decarboxyl 100.0 1.7E-25 3.7E-30 211.0 32.9 325 51-406 30-370 (371)
169 cd06450 DOPA_deC_like DOPA dec 100.0 8E-27 1.7E-31 217.8 23.0 309 54-403 12-344 (345)
170 TIGR02326 transamin_PhnW 2-ami 100.0 9.3E-26 2E-30 211.8 29.9 293 79-405 37-360 (363)
171 PLN02242 methionine gamma-lyas 100.0 8.7E-26 1.9E-30 213.0 29.1 219 77-335 76-304 (418)
172 TIGR00713 hemL glutamate-1-sem 100.0 4.8E-26 1E-30 217.7 27.6 345 32-407 45-422 (423)
173 PRK07504 O-succinylhomoserine 100.0 6E-25 1.3E-29 206.8 33.4 228 70-335 59-291 (398)
174 PRK06767 methionine gamma-lyas 100.0 2.3E-25 4.9E-30 209.4 30.1 290 70-406 55-384 (386)
175 PRK08776 cystathionine gamma-s 100.0 6.9E-25 1.5E-29 206.2 33.1 227 70-335 54-286 (405)
176 PRK00854 rocD ornithine--oxo-a 99.9 3.6E-25 7.8E-30 210.5 31.3 333 33-406 39-400 (401)
177 TIGR03812 tyr_de_CO2_Arch tyro 99.9 8.1E-25 1.8E-29 206.5 32.8 314 54-403 33-372 (373)
178 PRK14012 cysteine desulfurase; 99.9 7.4E-25 1.6E-29 208.4 32.5 334 38-408 5-380 (404)
179 PRK08088 4-aminobutyrate amino 99.9 2.3E-25 5.1E-30 212.3 28.9 353 32-407 38-423 (425)
180 PLN02955 8-amino-7-oxononanoat 99.9 9E-25 1.9E-29 204.2 31.9 326 34-408 101-462 (476)
181 PRK08045 cystathionine gamma-s 99.9 1.2E-24 2.7E-29 203.4 32.9 228 69-335 45-278 (386)
182 PRK08133 O-succinylhomoserine 99.9 1.1E-24 2.3E-29 204.7 32.0 221 77-335 61-286 (390)
183 PRK08249 cystathionine gamma-s 99.9 8.9E-25 1.9E-29 205.3 31.3 225 72-335 60-289 (398)
184 PRK00011 glyA serine hydroxyme 99.9 9.1E-25 2E-29 208.8 31.2 335 34-407 24-389 (416)
185 TIGR02080 O_succ_thio_ly O-suc 99.9 1.2E-24 2.7E-29 203.4 31.2 227 70-335 45-277 (382)
186 TIGR01437 selA_rel uncharacter 99.9 5.3E-25 1.2E-29 205.2 28.5 322 35-404 8-362 (363)
187 PRK08861 cystathionine gamma-s 99.9 2E-24 4.3E-29 201.3 32.0 227 70-335 47-279 (388)
188 PRK04260 acetylornithine amino 99.9 1.4E-24 3E-29 204.4 31.1 333 33-404 27-374 (375)
189 PRK09028 cystathionine beta-ly 99.9 3.6E-24 7.9E-29 199.2 33.3 314 51-411 35-391 (394)
190 PRK07810 O-succinylhomoserine 99.9 1.7E-24 3.6E-29 203.8 31.2 227 70-335 64-296 (403)
191 cd00614 CGS_like CGS_like: Cys 99.9 2E-24 4.4E-29 202.2 31.6 285 72-405 36-368 (369)
192 PRK07505 hypothetical protein; 99.9 2.1E-24 4.6E-29 205.0 31.7 332 32-407 43-399 (402)
193 PRK00451 glycine dehydrogenase 99.9 1E-24 2.3E-29 210.1 29.8 326 36-405 69-446 (447)
194 PRK07811 cystathionine gamma-s 99.9 2.9E-24 6.3E-29 201.7 31.6 225 72-335 57-287 (388)
195 PRK07503 methionine gamma-lyas 99.9 3E-24 6.6E-29 202.4 31.8 226 70-335 59-292 (403)
196 TIGR01328 met_gam_lyase methio 99.9 4.9E-24 1.1E-28 200.2 32.0 226 70-335 53-286 (391)
197 PRK06460 hypothetical protein; 99.9 3.4E-24 7.4E-29 200.4 30.5 224 72-335 41-270 (376)
198 TIGR03246 arg_catab_astC succi 99.9 5E-24 1.1E-28 201.5 31.7 334 33-407 33-395 (397)
199 PRK05937 8-amino-7-oxononanoat 99.9 5.2E-24 1.1E-28 199.9 31.3 327 34-410 3-353 (370)
200 TIGR01325 O_suc_HS_sulf O-succ 99.9 6.5E-24 1.4E-28 199.1 31.6 226 70-335 48-279 (380)
201 PLN00144 acetylornithine trans 99.9 4.1E-24 8.9E-29 200.4 30.0 342 32-408 12-381 (382)
202 PLN02651 cysteine desulfurase 99.9 3.1E-24 6.7E-29 201.3 28.6 314 51-395 9-364 (364)
203 PTZ00125 ornithine aminotransf 99.9 5.2E-24 1.1E-28 202.7 30.4 341 33-408 29-396 (400)
204 PRK07582 cystathionine gamma-l 99.9 4.9E-24 1.1E-28 198.7 29.4 283 70-406 45-364 (366)
205 PRK08574 cystathionine gamma-s 99.9 1.9E-23 4.1E-28 195.6 31.9 224 72-335 49-278 (385)
206 PRK07050 cystathionine beta-ly 99.9 1.1E-23 2.3E-28 197.9 30.3 294 70-407 59-391 (394)
207 TIGR03235 DNA_S_dndA cysteine 99.9 1.1E-24 2.4E-29 203.7 22.8 317 51-397 8-348 (353)
208 PF00266 Aminotran_5: Aminotra 99.9 2.3E-23 4.9E-28 196.2 30.3 312 51-397 9-371 (371)
209 PRK05968 hypothetical protein; 99.9 3.7E-23 8E-28 194.3 30.7 288 71-407 58-386 (389)
210 PRK08248 O-acetylhomoserine am 99.9 1E-22 2.2E-27 192.8 32.8 232 72-335 60-322 (431)
211 TIGR00700 GABAtrnsam 4-aminobu 99.9 4.4E-23 9.6E-28 196.2 30.0 352 33-406 31-419 (420)
212 PRK06702 O-acetylhomoserine am 99.9 5.8E-23 1.3E-27 192.8 30.2 229 77-335 61-319 (432)
213 PRK07269 cystathionine gamma-s 99.9 4.7E-23 1E-27 191.3 28.3 291 70-405 48-362 (364)
214 COG4992 ArgD Ornithine/acetylo 99.9 4.5E-23 9.7E-28 184.7 27.0 340 32-410 39-401 (404)
215 PRK04366 glycine dehydrogenase 99.9 2.5E-22 5.4E-27 193.6 34.0 341 40-410 73-451 (481)
216 PLN02624 ornithine-delta-amino 99.9 6.8E-23 1.5E-27 196.9 29.9 347 32-412 72-449 (474)
217 TIGR01326 OAH_OAS_sulfhy OAH/O 99.9 8.9E-23 1.9E-27 193.5 30.1 234 70-335 51-314 (418)
218 PRK09792 4-aminobutyrate trans 99.9 2.1E-22 4.5E-27 191.3 32.6 351 32-406 37-420 (421)
219 PRK04612 argD acetylornithine 99.9 2E-22 4.3E-27 190.0 32.1 346 32-410 37-406 (408)
220 PRK06084 O-acetylhomoserine am 99.9 2E-22 4.3E-27 190.6 32.1 232 72-335 54-317 (425)
221 TIGR01329 cysta_beta_ly_E cyst 99.9 8.3E-23 1.8E-27 191.2 29.0 282 79-407 49-375 (378)
222 TIGR01324 cysta_beta_ly_B cyst 99.9 1.8E-22 3.9E-27 188.1 30.9 284 78-406 51-375 (377)
223 PRK06918 4-aminobutyrate amino 99.9 2.2E-22 4.8E-27 192.9 32.3 355 33-411 52-447 (451)
224 COG0075 Serine-pyruvate aminot 99.9 2.3E-22 5.1E-27 182.0 30.4 332 51-409 14-365 (383)
225 KOG1549 Cysteine desulfurase N 99.9 4.1E-23 8.9E-28 185.9 24.4 203 34-261 41-257 (428)
226 PRK05939 hypothetical protein; 99.9 4.5E-22 9.7E-27 186.8 32.4 226 79-335 49-293 (397)
227 TIGR01885 Orn_aminotrans ornit 99.9 2.3E-22 4.9E-27 191.0 30.3 334 33-405 35-400 (401)
228 TIGR02379 ECA_wecE TDP-4-keto- 99.9 8.9E-22 1.9E-26 184.0 32.8 309 54-405 10-375 (376)
229 PRK06777 4-aminobutyrate amino 99.9 3.9E-22 8.4E-27 189.4 30.3 348 32-406 37-420 (421)
230 PRK08064 cystathionine beta-ly 99.9 7E-22 1.5E-26 185.7 31.2 281 78-408 55-383 (390)
231 PRK00062 glutamate-1-semialdeh 99.9 1.5E-22 3.2E-27 192.9 26.7 347 32-408 47-425 (426)
232 cd00616 AHBA_syn 3-amino-5-hyd 99.9 7.8E-22 1.7E-26 184.8 30.7 302 59-402 3-352 (352)
233 COG2008 GLY1 Threonine aldolas 99.9 2.2E-22 4.8E-27 176.7 24.4 327 38-405 2-341 (342)
234 PRK08360 4-aminobutyrate amino 99.9 2.7E-21 5.9E-26 184.1 34.0 350 32-409 38-428 (443)
235 PRK07671 cystathionine beta-ly 99.9 1.4E-21 3.1E-26 182.6 30.4 226 70-335 44-275 (377)
236 PRK11706 TDP-4-oxo-6-deoxy-D-g 99.9 3.1E-21 6.8E-26 181.2 32.8 310 55-405 11-374 (375)
237 PLN02509 cystathionine beta-ly 99.9 2.5E-21 5.4E-26 183.4 32.2 228 71-335 125-358 (464)
238 PRK11658 UDP-4-amino-4-deoxy-L 99.9 2.1E-21 4.6E-26 182.4 31.5 310 55-405 14-377 (379)
239 PRK05967 cystathionine beta-ly 99.9 4.8E-21 1E-25 178.0 32.5 204 102-336 81-290 (395)
240 PRK13034 serine hydroxymethylt 99.9 3.7E-21 8E-26 182.4 32.0 332 35-406 28-391 (416)
241 TIGR01814 kynureninase kynuren 99.9 3.2E-21 7E-26 183.4 30.6 331 35-405 26-405 (406)
242 PRK08134 O-acetylhomoserine am 99.9 7.6E-21 1.7E-25 179.9 32.6 227 77-334 64-321 (433)
243 PRK06176 cystathionine gamma-s 99.9 6.4E-21 1.4E-25 178.3 31.4 221 70-330 44-270 (380)
244 PRK08117 4-aminobutyrate amino 99.9 4.2E-21 9E-26 183.6 30.7 352 32-410 40-432 (433)
245 PRK07812 O-acetylhomoserine am 99.9 8.3E-21 1.8E-25 179.4 32.0 229 77-335 69-326 (436)
246 PRK05994 O-acetylhomoserine am 99.9 1.1E-20 2.5E-25 179.2 32.7 227 78-335 64-321 (427)
247 PRK07495 4-aminobutyrate amino 99.9 9.3E-21 2E-25 179.7 31.2 350 33-409 38-423 (425)
248 PRK06058 4-aminobutyrate amino 99.9 2E-20 4.3E-25 178.9 32.7 350 33-407 54-442 (443)
249 COG0399 WecE Predicted pyridox 99.9 2.9E-20 6.2E-25 168.8 31.5 311 53-407 13-373 (374)
250 TIGR03588 PseC UDP-4-keto-6-de 99.9 2.6E-20 5.7E-25 175.7 32.7 308 54-404 9-379 (380)
251 COG0160 GabT 4-aminobutyrate a 99.9 3.2E-20 6.9E-25 171.6 31.0 350 32-408 53-446 (447)
252 PRK09264 diaminobutyrate--2-ox 99.9 2.7E-20 5.9E-25 177.2 31.3 353 32-411 36-420 (425)
253 PRK05964 adenosylmethionine--8 99.9 8.9E-21 1.9E-25 180.8 27.0 348 32-407 39-422 (423)
254 TIGR02407 ectoine_ectB diamino 99.9 5.2E-20 1.1E-24 174.4 31.9 346 32-406 32-411 (412)
255 PRK08114 cystathionine beta-ly 99.9 4.5E-20 9.7E-25 171.4 30.5 220 77-335 62-289 (395)
256 TIGR01788 Glu-decarb-GAD gluta 99.9 7.5E-20 1.6E-24 172.5 31.7 339 52-408 52-430 (431)
257 KOG1360 5-aminolevulinate synt 99.9 1.9E-20 4.2E-25 164.3 25.2 335 34-408 170-525 (570)
258 KOG1412 Aspartate aminotransfe 99.9 3.6E-20 7.7E-25 157.6 25.9 364 16-408 16-406 (410)
259 PRK15407 lipopolysaccharide bi 99.9 4.1E-19 9E-24 168.8 36.1 329 35-406 23-435 (438)
260 PF01053 Cys_Met_Meta_PP: Cys/ 99.9 9.9E-20 2.1E-24 168.8 31.0 282 78-406 56-386 (386)
261 PRK03715 argD acetylornithine 99.9 1E-19 2.3E-24 171.2 31.6 339 33-408 34-394 (395)
262 PRK13580 serine hydroxymethylt 99.9 5.2E-20 1.1E-24 172.5 28.9 341 35-407 49-445 (493)
263 PTZ00094 serine hydroxymethylt 99.9 6.5E-20 1.4E-24 176.1 28.9 339 34-408 33-409 (452)
264 PRK05613 O-acetylhomoserine am 99.9 1.9E-19 4.2E-24 170.2 31.5 228 78-335 70-331 (437)
265 PLN02724 Molybdenum cofactor s 99.9 7.9E-20 1.7E-24 186.4 30.9 340 37-406 35-487 (805)
266 PF01041 DegT_DnrJ_EryC1: DegT 99.9 5.2E-20 1.1E-24 172.2 27.2 306 55-402 5-363 (363)
267 COG0001 HemL Glutamate-1-semia 99.9 1.8E-19 3.8E-24 163.5 28.3 343 33-409 51-430 (432)
268 TIGR00709 dat 2,4-diaminobutyr 99.9 5.5E-19 1.2E-23 168.8 32.0 355 32-412 36-440 (442)
269 cd00615 Orn_deC_like Ornithine 99.9 7.1E-21 1.5E-25 172.9 17.5 226 77-324 59-293 (294)
270 PRK06541 hypothetical protein; 99.9 8.9E-19 1.9E-23 167.5 31.6 356 32-410 49-458 (460)
271 COG0626 MetC Cystathionine bet 99.9 1.7E-18 3.6E-23 158.3 31.4 286 72-407 59-394 (396)
272 KOG1368 Threonine aldolase [Am 99.9 3.1E-19 6.6E-24 151.1 24.1 326 34-403 20-364 (384)
273 PRK11522 putrescine--2-oxoglut 99.9 8.2E-19 1.8E-23 167.4 30.1 350 33-413 80-457 (459)
274 cd00611 PSAT_like Phosphoserin 99.9 1.7E-19 3.8E-24 168.0 24.9 311 51-404 8-353 (355)
275 TIGR01364 serC_1 phosphoserine 99.9 7.3E-19 1.6E-23 162.6 28.7 312 53-407 3-348 (349)
276 TIGR03372 putres_am_tran putre 99.9 7.8E-19 1.7E-23 166.3 29.2 339 33-404 73-441 (442)
277 PRK06434 cystathionine gamma-l 99.9 2.6E-18 5.6E-23 159.8 30.4 280 77-406 64-383 (384)
278 PRK05769 4-aminobutyrate amino 99.8 6.5E-18 1.4E-22 161.1 33.9 349 32-408 51-440 (441)
279 PRK03080 phosphoserine aminotr 99.8 4E-19 8.6E-24 166.9 24.8 323 38-408 14-374 (378)
280 PLN02414 glycine dehydrogenase 99.8 2.9E-18 6.3E-23 173.9 32.3 301 80-410 571-910 (993)
281 PF04864 Alliinase_C: Allinase 99.8 2.6E-20 5.6E-25 162.3 15.0 290 78-404 44-362 (363)
282 TIGR03531 selenium_SpcS O-phos 99.8 1.9E-18 4.1E-23 162.1 28.6 305 79-404 103-443 (444)
283 PRK02769 histidine decarboxyla 99.8 6.5E-18 1.4E-22 157.3 31.8 289 79-407 63-372 (380)
284 PLN02760 4-aminobutyrate:pyruv 99.8 6.3E-18 1.4E-22 162.8 32.4 354 32-411 86-495 (504)
285 TIGR02618 tyr_phenol_ly tyrosi 99.8 1E-17 2.2E-22 155.0 32.2 321 55-407 50-426 (450)
286 PRK08593 4-aminobutyrate amino 99.8 1.1E-17 2.4E-22 159.7 33.2 351 32-410 39-432 (445)
287 PRK07046 aminotransferase; Val 99.8 5.3E-18 1.1E-22 161.8 30.1 343 33-409 73-452 (453)
288 KOG1359 Glycine C-acetyltransf 99.8 7.5E-19 1.6E-23 148.5 20.5 327 32-407 64-412 (417)
289 PLN03226 serine hydroxymethylt 99.8 7.6E-18 1.6E-22 161.1 30.2 345 35-407 34-419 (475)
290 PRK07482 hypothetical protein; 99.8 1.2E-17 2.6E-22 160.0 31.7 354 32-412 47-459 (461)
291 PRK05355 3-phosphoserine/phosp 99.8 4.2E-18 9.2E-23 158.3 27.6 323 51-407 12-358 (360)
292 PRK04013 argD acetylornithine/ 99.8 4.9E-18 1.1E-22 157.2 27.7 326 32-409 21-362 (364)
293 PLN02590 probable tyrosine dec 99.8 8.1E-18 1.8E-22 161.7 30.0 340 55-409 145-534 (539)
294 PLN02880 tyrosine decarboxylas 99.8 7.1E-18 1.5E-22 162.1 29.6 340 55-410 97-487 (490)
295 PRK05639 4-aminobutyrate amino 99.8 1.6E-17 3.5E-22 158.6 31.6 350 32-409 50-445 (457)
296 KOG1411 Aspartate aminotransfe 99.8 4E-19 8.7E-24 153.3 18.2 357 16-406 38-424 (427)
297 PRK07678 aminotransferase; Val 99.8 1.7E-17 3.6E-22 158.7 31.4 349 32-407 44-449 (451)
298 PRK13360 omega amino acid--pyr 99.8 2.5E-17 5.4E-22 157.0 32.5 350 32-408 43-441 (442)
299 KOG0053 Cystathionine beta-lya 99.8 1.2E-17 2.7E-22 150.5 27.8 216 78-330 78-298 (409)
300 PRK06943 adenosylmethionine--8 99.8 1.8E-17 3.9E-22 158.3 30.6 350 32-410 51-449 (453)
301 PRK12403 putative aminotransfe 99.8 2.8E-17 6.2E-22 157.4 31.8 351 32-412 51-457 (460)
302 PRK05965 hypothetical protein; 99.8 2E-17 4.4E-22 158.4 30.4 350 32-408 43-448 (459)
303 PRK06082 4-aminobutyrate amino 99.8 4.4E-17 9.5E-22 155.9 32.1 349 33-411 70-455 (459)
304 PRK07986 adenosylmethionine--8 99.8 1.1E-17 2.4E-22 158.4 27.8 341 32-407 40-423 (428)
305 PRK06062 hypothetical protein; 99.8 2.5E-17 5.5E-22 157.3 30.0 347 32-408 50-446 (451)
306 PRK06105 aminotransferase; Pro 99.8 3.3E-17 7.1E-22 157.0 30.5 349 32-410 45-452 (460)
307 COG1103 Archaea-specific pyrid 99.8 2.2E-17 4.8E-22 138.1 25.1 323 52-408 28-381 (382)
308 PRK06173 adenosylmethionine--8 99.8 2.6E-17 5.7E-22 156.1 29.3 344 32-408 41-426 (429)
309 PLN03032 serine decarboxylase; 99.8 7.8E-17 1.7E-21 148.9 30.6 311 55-403 37-372 (374)
310 PRK09221 beta alanine--pyruvat 99.8 7E-17 1.5E-21 154.1 31.0 350 32-408 46-444 (445)
311 PRK13237 tyrosine phenol-lyase 99.8 2.4E-16 5.2E-21 146.3 33.0 307 72-407 73-433 (460)
312 PRK05630 adenosylmethionine--8 99.8 3.6E-17 7.7E-22 155.0 28.3 340 32-407 37-420 (422)
313 PRK08742 adenosylmethionine--8 99.8 7.8E-17 1.7E-21 154.2 30.5 353 32-408 61-468 (472)
314 PRK12389 glutamate-1-semialdeh 99.8 8.5E-17 1.8E-21 153.3 30.5 343 32-407 50-427 (428)
315 PRK00615 glutamate-1-semialdeh 99.8 3.2E-17 6.9E-22 155.4 27.0 346 32-409 50-430 (433)
316 COG2873 MET17 O-acetylhomoseri 99.8 8.1E-17 1.7E-21 141.1 27.2 293 77-406 62-424 (426)
317 PLN02271 serine hydroxymethylt 99.8 1.9E-16 4.1E-21 149.3 31.6 346 35-406 148-539 (586)
318 PLN02482 glutamate-1-semialdeh 99.8 1.1E-16 2.4E-21 152.9 29.8 343 32-407 96-473 (474)
319 PRK06149 hypothetical protein; 99.8 1.1E-16 2.5E-21 166.2 32.1 345 32-407 582-970 (972)
320 PRK07481 hypothetical protein; 99.8 1.9E-16 4E-21 151.5 31.1 350 32-408 39-446 (449)
321 PRK07480 putative aminotransfe 99.8 1.4E-16 3.1E-21 152.3 29.8 354 32-412 47-453 (456)
322 PRK06148 hypothetical protein; 99.8 1.5E-16 3.2E-21 165.5 32.2 345 33-408 622-1011(1013)
323 PRK07030 adenosylmethionine--8 99.8 1.7E-16 3.6E-21 152.1 30.0 348 32-408 44-447 (466)
324 PRK06917 hypothetical protein; 99.8 3.3E-16 7.2E-21 149.5 31.7 354 32-410 28-440 (447)
325 PRK07036 hypothetical protein; 99.8 2.1E-16 4.6E-21 151.5 30.1 352 32-412 48-457 (466)
326 cd01494 AAT_I Aspartate aminot 99.8 7.7E-18 1.7E-22 140.4 17.7 166 79-259 2-169 (170)
327 TIGR00508 bioA adenosylmethion 99.8 1E-16 2.2E-21 152.4 27.5 340 33-407 43-426 (427)
328 PRK06916 adenosylmethionine--8 99.8 1.8E-16 3.9E-21 151.9 28.8 346 33-408 54-456 (460)
329 COG0076 GadB Glutamate decarbo 99.8 1.1E-16 2.4E-21 151.4 26.9 279 51-347 72-381 (460)
330 PRK06938 diaminobutyrate--2-ox 99.8 7.4E-16 1.6E-20 147.5 32.0 353 32-409 60-462 (464)
331 KOG1357 Serine palmitoyltransf 99.8 6.7E-18 1.5E-22 150.9 15.9 334 36-407 137-502 (519)
332 PRK07483 hypothetical protein; 99.8 6.8E-16 1.5E-20 147.2 30.6 351 33-409 28-439 (443)
333 COG0112 GlyA Glycine/serine hy 99.8 7.6E-16 1.6E-20 136.6 27.9 338 35-407 26-390 (413)
334 PRK04311 selenocysteine syntha 99.8 1.3E-15 2.9E-20 144.6 30.9 321 51-406 96-463 (464)
335 PRK06931 diaminobutyrate--2-ox 99.8 2.4E-15 5.2E-20 144.0 32.7 354 32-410 55-457 (459)
336 KOG1404 Alanine-glyoxylate ami 99.8 2E-16 4.4E-21 139.2 23.1 342 32-401 47-432 (442)
337 PF00464 SHMT: Serine hydroxym 99.8 1E-16 2.2E-21 147.3 21.8 339 35-400 20-398 (399)
338 TIGR01366 serC_3 phosphoserine 99.8 1.7E-16 3.8E-21 147.8 23.2 313 51-407 12-360 (361)
339 COG0161 BioA Adenosylmethionin 99.8 7.4E-16 1.6E-20 141.9 25.8 349 33-411 42-447 (449)
340 KOG2862 Alanine-glyoxylate ami 99.7 3.1E-15 6.7E-20 127.9 26.6 279 101-407 69-382 (385)
341 KOG1402 Ornithine aminotransfe 99.7 1.9E-16 4.2E-21 136.1 19.3 339 34-406 58-426 (427)
342 PRK08297 L-lysine aminotransfe 99.7 3.3E-15 7.2E-20 142.5 29.4 343 33-408 43-442 (443)
343 PRK06209 glutamate-1-semialdeh 99.7 1.9E-15 4.1E-20 144.1 26.9 332 32-411 45-409 (431)
344 PLN02263 serine decarboxylase 99.7 2.6E-14 5.7E-19 134.1 33.6 296 78-409 130-445 (470)
345 PRK05367 glycine dehydrogenase 99.7 9.8E-15 2.1E-19 149.2 32.9 342 34-410 498-878 (954)
346 KOG1358 Serine palmitoyltransf 99.7 3E-16 6.6E-21 138.0 18.3 341 32-407 91-465 (467)
347 PLN02452 phosphoserine transam 99.7 1.7E-14 3.6E-19 133.5 28.5 328 36-407 7-363 (365)
348 TIGR03799 NOD_PanD_pyr putativ 99.7 1.1E-14 2.4E-19 140.4 28.2 267 61-345 110-437 (522)
349 TIGR03251 LAT_fam L-lysine 6-t 99.7 1.6E-14 3.5E-19 137.7 28.3 343 33-403 36-430 (431)
350 TIGR00474 selA seryl-tRNA(sec) 99.7 2.8E-14 6E-19 135.3 29.2 314 51-401 91-453 (454)
351 TIGR01365 serC_2 phosphoserine 99.7 2.4E-14 5.2E-19 132.5 27.4 313 57-406 19-372 (374)
352 TIGR00461 gcvP glycine dehydro 99.7 8.3E-14 1.8E-18 140.1 32.9 306 77-410 526-870 (939)
353 PF01276 OKR_DC_1: Orn/Lys/Arg 99.7 4.9E-16 1.1E-20 143.4 15.8 235 77-331 66-325 (417)
354 PRK15029 arginine decarboxylas 99.7 1.7E-14 3.7E-19 142.9 27.6 231 77-326 205-464 (755)
355 KOG1401 Acetylornithine aminot 99.7 9.6E-15 2.1E-19 129.8 22.6 347 32-408 53-431 (433)
356 TIGR00699 GABAtrns_euk 4-amino 99.7 1.1E-14 2.3E-19 138.5 24.6 340 32-405 55-464 (464)
357 PRK12566 glycine dehydrogenase 99.7 9.7E-14 2.1E-18 138.7 29.9 311 71-410 530-879 (954)
358 PF01212 Beta_elim_lyase: Beta 99.7 2.3E-16 5E-21 140.9 8.3 247 53-328 7-272 (290)
359 PLN02974 adenosylmethionine-8- 99.7 1.1E-13 2.4E-18 139.2 28.1 345 36-405 366-816 (817)
360 PRK12462 phosphoserine aminotr 99.6 7.3E-13 1.6E-17 121.3 28.2 335 37-407 5-362 (364)
361 PF00282 Pyridoxal_deC: Pyrido 99.6 1.1E-13 2.4E-18 128.8 21.5 274 55-344 54-371 (373)
362 PRK13578 ornithine decarboxyla 99.6 2.9E-13 6.3E-18 132.9 25.0 167 79-260 176-369 (720)
363 PRK05367 glycine dehydrogenase 99.6 3.2E-12 6.9E-17 131.0 29.7 271 79-402 123-437 (954)
364 TIGR02617 tnaA_trp_ase tryptop 99.6 3.4E-12 7.4E-17 117.4 26.9 341 34-407 40-441 (467)
365 PRK15400 lysine decarboxylase 99.6 1.1E-12 2.5E-17 128.6 24.6 297 79-406 197-558 (714)
366 PRK15399 lysine decarboxylase 99.5 9.1E-12 2E-16 122.4 29.0 165 79-260 197-381 (713)
367 PF00202 Aminotran_3: Aminotra 99.5 1.8E-13 3.9E-18 126.4 15.6 283 32-345 13-337 (339)
368 PLN02414 glycine dehydrogenase 99.5 2E-11 4.3E-16 124.7 29.0 299 52-403 116-465 (993)
369 PLN02994 1-aminocyclopropane-1 99.5 3.3E-13 7.2E-18 108.2 12.6 115 16-136 23-153 (153)
370 KOG1383 Glutamate decarboxylas 99.4 5.2E-11 1.1E-15 108.0 23.6 314 77-410 116-449 (491)
371 TIGR03811 tyr_de_CO2_Ent tyros 99.4 3.3E-10 7.1E-15 110.6 30.8 256 54-326 96-475 (608)
372 COG1982 LdcC Arginine/lysine/o 99.4 5E-10 1.1E-14 105.9 27.1 235 78-332 71-318 (557)
373 KOG2467 Glycine/serine hydroxy 99.4 1.3E-09 2.9E-14 95.8 25.4 336 52-407 51-426 (477)
374 COG1003 GcvP Glycine cleavage 99.4 1.4E-09 3.1E-14 98.0 26.2 315 76-410 104-450 (496)
375 COG3844 Kynureninase [Amino ac 99.3 1.6E-09 3.5E-14 94.0 25.1 298 79-409 74-404 (407)
376 KOG1403 Predicted alanine-glyo 99.3 2.1E-10 4.5E-15 98.2 18.8 348 33-408 45-438 (452)
377 TIGR00461 gcvP glycine dehydro 99.3 3.8E-09 8.1E-14 107.0 30.4 280 80-402 112-426 (939)
378 PF02347 GDC-P: Glycine cleava 99.2 1.1E-08 2.3E-13 95.1 23.3 281 80-401 113-429 (429)
379 COG1921 SelA Selenocysteine sy 99.2 3.3E-09 7.2E-14 96.1 19.3 225 51-299 37-268 (395)
380 PF06838 Met_gamma_lyase: Meth 99.2 2E-09 4.4E-14 95.5 16.9 197 55-278 27-248 (403)
381 KOG0628 Aromatic-L-amino-acid/ 99.1 3.7E-07 8.1E-12 83.2 27.8 323 75-410 107-474 (511)
382 COG3033 TnaA Tryptophanase [Am 99.0 6.5E-08 1.4E-12 85.3 20.5 312 72-407 74-444 (471)
383 KOG0629 Glutamate decarboxylas 99.0 2.3E-08 5.1E-13 89.9 14.6 332 57-406 118-508 (510)
384 KOG1405 4-aminobutyrate aminot 98.9 2.8E-07 6E-12 81.1 18.1 215 163-407 255-483 (484)
385 COG0403 GcvP Glycine cleavage 98.9 1.2E-05 2.5E-10 73.2 28.7 276 97-404 134-447 (450)
386 PF03841 SelA: L-seryl-tRNA se 98.8 3.5E-09 7.5E-14 95.1 5.2 250 52-325 17-295 (367)
387 PF05889 SLA_LP_auto_ag: Solub 98.8 4.9E-07 1.1E-11 82.2 18.9 289 101-406 75-389 (389)
388 COG4100 Cystathionine beta-lya 98.8 5.9E-07 1.3E-11 77.4 16.0 174 72-261 61-250 (416)
389 COG1932 SerC Phosphoserine ami 98.7 4.1E-06 8.8E-11 74.8 21.3 331 35-407 4-363 (365)
390 PRK12566 glycine dehydrogenase 98.6 5.1E-05 1.1E-09 77.3 26.9 269 81-402 128-439 (954)
391 KOG3846 L-kynurenine hydrolase 98.0 0.0057 1.2E-07 53.6 21.3 327 53-408 79-462 (465)
392 KOG2040 Glycine dehydrogenase 97.9 0.0031 6.7E-08 60.7 20.2 309 77-409 578-920 (1001)
393 KOG2790 Phosphoserine aminotra 97.8 0.0037 8E-08 54.1 17.0 333 34-407 5-368 (370)
394 KOG3843 Predicted serine hydro 97.6 0.0006 1.3E-08 58.2 9.7 302 95-412 71-407 (432)
395 PLN02672 methionine S-methyltr 97.1 0.021 4.5E-07 60.1 16.4 218 57-293 406-642 (1082)
396 KOG2040 Glycine dehydrogenase 95.4 3 6.4E-05 41.2 21.0 88 301-402 389-478 (1001)
397 COG2102 Predicted ATPases of P 80.1 23 0.0005 30.3 9.5 98 102-209 3-115 (223)
398 PRK10595 SOS cell division inh 79.3 33 0.00071 28.0 9.8 103 102-208 30-136 (164)
399 TIGR00623 sula cell division i 74.8 41 0.00088 27.5 9.2 83 120-208 56-140 (168)
400 TIGR03573 WbuX N-acetyl sugar 66.6 59 0.0013 30.3 9.8 109 100-222 60-176 (343)
401 PF04392 ABC_sub_bind: ABC tra 66.6 30 0.00065 31.3 7.9 142 55-210 14-164 (294)
402 TIGR01470 cysG_Nterm siroheme 65.1 87 0.0019 26.6 10.9 96 98-214 7-103 (205)
403 KOG0630 Predicted pyridoxal-de 64.0 96 0.0021 30.0 10.4 71 138-211 246-328 (838)
404 PRK10886 DnaA initiator-associ 64.0 76 0.0016 26.8 9.1 41 164-211 101-141 (196)
405 COG0296 GlgB 1,4-alpha-glucan 59.6 12 0.00025 37.6 4.0 34 190-223 211-244 (628)
406 COG0074 SucD Succinyl-CoA synt 59.5 38 0.00083 30.1 6.6 84 123-216 43-126 (293)
407 PF05368 NmrA: NmrA-like famil 59.2 1.1E+02 0.0023 26.4 9.8 95 104-210 2-98 (233)
408 COG1184 GCD2 Translation initi 59.2 1.4E+02 0.003 27.1 11.1 109 98-216 117-232 (301)
409 PF13460 NAD_binding_10: NADH( 56.6 82 0.0018 25.7 8.3 89 103-207 1-90 (183)
410 cd06568 GH20_SpHex_like A subg 54.5 30 0.00066 32.0 5.6 68 139-210 25-92 (329)
411 TIGR00262 trpA tryptophan synt 53.1 1.6E+02 0.0036 26.0 15.4 139 33-189 36-179 (256)
412 cd01018 ZntC Metal binding pro 52.6 1.7E+02 0.0037 26.0 11.0 74 123-211 169-245 (266)
413 COG0552 FtsY Signal recognitio 51.8 74 0.0016 29.2 7.4 99 110-217 153-271 (340)
414 PRK04296 thymidine kinase; Pro 51.4 72 0.0016 26.7 7.1 96 109-217 16-117 (190)
415 PRK05678 succinyl-CoA syntheta 51.1 50 0.0011 29.9 6.3 76 132-217 52-127 (291)
416 KOG2741 Dimeric dihydrodiol de 50.4 1.3E+02 0.0029 27.8 8.7 76 130-216 57-132 (351)
417 PLN00191 enolase 49.8 66 0.0014 31.3 7.3 99 108-213 296-395 (457)
418 TIGR00524 eIF-2B_rel eIF-2B al 49.7 2.1E+02 0.0045 26.2 10.9 104 99-212 117-237 (303)
419 cd02742 GH20_hexosaminidase Be 49.5 35 0.00076 31.1 5.2 67 139-210 23-89 (303)
420 COG1105 FruK Fructose-1-phosph 49.5 1.6E+02 0.0035 26.9 9.2 39 178-218 133-171 (310)
421 cd00532 MGS-like MGS-like doma 48.9 1.1E+02 0.0024 22.9 10.1 94 112-214 13-107 (112)
422 PF02603 Hpr_kinase_N: HPr Ser 48.7 26 0.00056 27.2 3.6 39 164-211 72-110 (127)
423 KOG1465 Translation initiation 48.3 2.1E+02 0.0045 25.9 9.3 105 99-213 161-271 (353)
424 cd06570 GH20_chitobiase-like_1 47.9 42 0.00092 30.7 5.4 24 187-210 62-85 (311)
425 PRK13937 phosphoheptose isomer 46.2 1.7E+02 0.0038 24.3 9.3 36 169-211 103-138 (188)
426 PF03748 FliL: Flagellar basal 46.0 25 0.00054 25.6 3.1 53 54-107 43-95 (99)
427 KOG1201 Hydroxysteroid 17-beta 46.0 1.2E+02 0.0027 27.3 7.8 101 98-201 36-144 (300)
428 cd01422 MGS Methylglyoxal synt 45.7 1.3E+02 0.0028 22.8 8.7 63 144-211 44-106 (115)
429 cd06562 GH20_HexA_HexB-like Be 44.8 38 0.00083 31.6 4.8 62 140-210 26-87 (348)
430 cd01020 TroA_b Metal binding p 44.8 2.2E+02 0.0049 25.2 10.1 79 123-210 152-236 (264)
431 smart00642 Aamy Alpha-amylase 44.7 29 0.00063 28.4 3.5 28 192-219 69-96 (166)
432 TIGR00290 MJ0570_dom MJ0570-re 44.5 2.1E+02 0.0045 24.8 9.5 96 103-208 4-113 (223)
433 PRK11070 ssDNA exonuclease Rec 44.5 2.5E+02 0.0054 28.3 10.5 99 105-213 51-158 (575)
434 KOG1467 Translation initiation 44.1 2.9E+02 0.0063 26.9 10.1 133 75-217 323-473 (556)
435 PRK11889 flhF flagellar biosyn 43.7 3E+02 0.0066 26.4 11.9 97 110-216 255-363 (436)
436 COG1088 RfbB dTDP-D-glucose 4, 43.4 2.6E+02 0.0056 25.5 10.3 110 102-223 2-138 (340)
437 TIGR01019 sucCoAalpha succinyl 43.3 75 0.0016 28.7 6.2 78 130-217 48-125 (286)
438 PF14258 DUF4350: Domain of un 43.3 1E+02 0.0022 20.7 5.9 61 136-212 9-70 (70)
439 smart00839 ELFV_dehydrog Gluta 42.1 1.4E+02 0.003 22.1 7.0 55 360-414 40-101 (102)
440 PLN03244 alpha-amylase; Provis 41.5 43 0.00094 34.6 4.7 37 185-221 433-469 (872)
441 TIGR02104 pulA_typeI pullulana 41.4 26 0.00057 35.5 3.4 28 192-219 228-255 (605)
442 PRK00077 eno enolase; Provisio 41.1 80 0.0017 30.4 6.4 86 119-211 272-361 (425)
443 cd03313 enolase Enolase: Enola 40.1 75 0.0016 30.4 6.0 93 110-210 264-360 (408)
444 TIGR00511 ribulose_e2b2 ribose 39.1 3E+02 0.0066 25.1 10.6 103 99-211 114-222 (301)
445 PRK08265 short chain dehydroge 38.3 2.7E+02 0.0059 24.3 9.8 55 100-154 6-60 (261)
446 PTZ00081 enolase; Provisional 38.2 1.1E+02 0.0024 29.6 6.8 97 108-212 282-382 (439)
447 PF04748 Polysacc_deac_2: Dive 37.9 1.8E+02 0.0039 24.9 7.4 119 78-210 72-206 (213)
448 PRK08638 threonine dehydratase 36.8 1.9E+02 0.004 26.8 7.9 52 101-152 76-128 (333)
449 COG2984 ABC-type uncharacteriz 35.7 3.5E+02 0.0076 24.8 10.7 144 54-216 44-198 (322)
450 PF13872 AAA_34: P-loop contai 35.7 31 0.00066 31.2 2.5 28 193-220 159-187 (303)
451 PRK08535 translation initiatio 35.5 3.5E+02 0.0076 24.8 10.4 102 99-211 119-227 (310)
452 PF01008 IF-2B: Initiation fac 34.9 1.9E+02 0.0042 25.8 7.7 119 80-212 91-216 (282)
453 COG0352 ThiE Thiamine monophos 34.6 1.5E+02 0.0033 25.3 6.4 52 163-216 24-75 (211)
454 PTZ00187 succinyl-CoA syntheta 34.6 1.3E+02 0.0028 27.6 6.3 78 130-217 73-151 (317)
455 TIGR02402 trehalose_TreZ malto 34.3 67 0.0014 32.1 4.9 29 191-219 158-186 (542)
456 PRK05234 mgsA methylglyoxal sy 34.0 2.4E+02 0.0052 22.4 9.5 69 139-214 43-114 (142)
457 COG1580 FliL Flagellar basal b 34.0 55 0.0012 26.6 3.4 54 54-107 102-155 (159)
458 TIGR00649 MG423 conserved hypo 33.1 3.4E+02 0.0075 26.0 9.4 94 101-206 287-400 (422)
459 COG0373 HemA Glutamyl-tRNA red 33.0 3E+02 0.0064 26.4 8.6 93 104-214 181-274 (414)
460 cd01424 MGS_CPS_II Methylglyox 33.0 2E+02 0.0044 21.3 9.8 89 111-212 13-101 (110)
461 TIGR00289 conserved hypothetic 32.9 3.3E+02 0.0071 23.6 8.9 96 103-208 4-113 (222)
462 COG0300 DltE Short-chain dehyd 32.8 3.6E+02 0.0078 24.1 8.9 97 102-200 7-113 (265)
463 KOG4589 Cell division protein 32.5 3E+02 0.0066 23.1 7.9 37 166-204 128-165 (232)
464 COG0826 Collagenase and relate 32.3 1.1E+02 0.0024 28.5 5.6 46 162-207 15-63 (347)
465 PF03652 UPF0081: Uncharacteri 32.2 1.4E+02 0.003 23.5 5.4 58 160-217 37-99 (135)
466 COG1091 RfbD dTDP-4-dehydrorha 31.9 3E+02 0.0065 24.8 8.0 97 162-261 38-154 (281)
467 KOG2774 NAD dependent epimeras 31.6 3.5E+02 0.0076 23.6 8.0 73 137-221 93-166 (366)
468 PRK03892 ribonuclease P protei 31.5 3.3E+02 0.0072 23.2 10.3 21 191-211 151-171 (216)
469 COG0159 TrpA Tryptophan syntha 31.0 3.9E+02 0.0083 23.9 14.4 90 111-205 109-203 (265)
470 PF00128 Alpha-amylase: Alpha 30.8 38 0.00082 30.5 2.4 28 192-219 51-78 (316)
471 cd06448 L-Ser-dehyd Serine deh 30.7 4.1E+02 0.009 24.3 9.2 53 100-152 51-104 (316)
472 COG2266 GTP:adenosylcobinamide 30.7 2.4E+02 0.0052 23.3 6.5 95 100-203 17-112 (177)
473 TIGR02012 tigrfam_recA protein 30.5 1.6E+02 0.0034 27.2 6.2 24 356-379 266-289 (321)
474 PRK08057 cobalt-precorrin-6x r 30.4 1.7E+02 0.0037 25.7 6.3 91 101-210 3-96 (248)
475 TIGR01060 eno phosphopyruvate 29.9 1.4E+02 0.0031 28.8 6.1 92 111-210 266-361 (425)
476 PF01408 GFO_IDH_MocA: Oxidore 29.8 1.4E+02 0.003 22.3 5.1 21 191-211 98-118 (120)
477 PF02571 CbiJ: Precorrin-6x re 29.4 1.6E+02 0.0035 26.0 5.9 91 102-210 2-97 (249)
478 PRK07718 fliL flagellar basal 29.4 66 0.0014 25.5 3.2 52 55-107 87-138 (142)
479 PF04016 DUF364: Domain of unk 29.2 2.2E+02 0.0048 22.7 6.2 76 122-205 9-88 (147)
480 PLN02591 tryptophan synthase 28.9 4.1E+02 0.0088 23.5 15.5 158 32-211 27-194 (250)
481 COG2089 SpsE Sialic acid synth 28.7 4.2E+02 0.009 24.4 8.2 75 123-208 101-175 (347)
482 CHL00200 trpA tryptophan synth 28.6 4.2E+02 0.0092 23.6 14.9 95 112-211 107-207 (263)
483 PRK08335 translation initiatio 28.5 4.4E+02 0.0095 23.7 10.9 110 81-211 94-216 (275)
484 cd06563 GH20_chitobiase-like T 28.4 60 0.0013 30.4 3.3 26 185-210 78-103 (357)
485 PRK13656 trans-2-enoyl-CoA red 28.2 5.3E+02 0.012 24.6 9.3 54 75-130 16-72 (398)
486 PRK09441 cytoplasmic alpha-amy 28.1 63 0.0014 31.7 3.5 28 192-219 80-107 (479)
487 cd00951 KDGDH 5-dehydro-4-deox 27.7 1.6E+02 0.0035 26.5 5.9 48 157-205 14-65 (289)
488 cd01563 Thr-synth_1 Threonine 27.7 4.3E+02 0.0092 24.2 8.8 53 100-152 70-123 (324)
489 PF10609 ParA: ParA/MinD ATPas 27.4 2.3E+02 0.0049 20.0 6.0 33 173-210 25-57 (81)
490 COG0505 CarA Carbamoylphosphat 27.3 1.8E+02 0.004 27.0 5.9 71 122-204 177-249 (368)
491 TIGR00655 PurU formyltetrahydr 27.1 4.7E+02 0.01 23.6 8.9 75 79-153 57-140 (280)
492 PRK12313 glycogen branching en 26.9 94 0.002 31.8 4.6 30 190-219 217-246 (633)
493 COG2515 Acd 1-aminocyclopropan 26.9 4.9E+02 0.011 23.8 9.6 103 100-204 63-177 (323)
494 PLN02960 alpha-amylase 26.8 93 0.002 32.8 4.4 36 185-220 458-493 (897)
495 TIGR02717 AcCoA-syn-alpha acet 26.6 2.4E+02 0.0052 27.4 7.1 58 162-220 77-135 (447)
496 PF03460 NIR_SIR_ferr: Nitrite 26.5 46 0.00099 22.3 1.6 25 181-206 13-37 (69)
497 PF00408 PGM_PMM_IV: Phosphogl 26.5 2.1E+02 0.0045 19.4 5.2 27 380-406 46-73 (73)
498 TIGR01515 branching_enzym alph 26.5 95 0.0021 31.6 4.5 31 189-219 202-232 (613)
499 PRK06027 purU formyltetrahydro 26.3 4.9E+02 0.011 23.5 9.1 76 77-154 61-146 (286)
500 PRK15452 putative protease; Pr 26.2 1.6E+02 0.0035 28.5 5.8 25 382-406 284-309 (443)
No 1
>KOG0259 consensus Tyrosine aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=3e-64 Score=435.43 Aligned_cols=400 Identities=59% Similarity=1.063 Sum_probs=380.6
Q ss_pred cchhhHHHHHHHhhhcccccccCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHh
Q 014936 12 GSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLS 91 (415)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~ 91 (415)
.+.++++..++.+....+++ .+++++.++.|+|+.++++.+.+...+|+.++++.+..+.|.+..|....|+++|+|++
T Consensus 39 a~~~tir~i~~~l~~~~~p~-~~k~iipl~~GDPsv~~~~~ts~~a~~Av~~al~Sgk~N~Yaps~G~~~AR~AVAeYl~ 117 (447)
T KOG0259|consen 39 AASVTIRGILSALFDCCDPE-KKKPILPLGHGDPSVYPCFRTSQEAEQAVVDALRSGKGNGYAPSVGILPARRAVAEYLN 117 (447)
T ss_pred hccccHHHHHHHHhhcCCcc-cCceeccCCCCCCCccccccCCHHHHHHHHHHHhcCCCCCcCCccccHHHHHHHHHHhh
Confidence 34578999999888888652 34599999999999999999999999999999999999999999999999999999999
Q ss_pred hhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcC
Q 014936 92 RDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLAD 171 (415)
Q Consensus 92 ~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~ 171 (415)
+.....+++++|++|+|+++|+++++.+|.+||..|+++.|+|+-|...++..|++++.++.-|+.+|.+|++.++.+++
T Consensus 118 ~~l~~kl~a~DV~ltsGC~qAIe~~i~~LA~p~aNILlPrPGfp~Y~~~a~~~~lEVR~ydlLPe~~weIDL~~veal~D 197 (447)
T KOG0259|consen 118 RDLPNKLTADDVVLTSGCSQAIELAISSLANPGANILLPRPGFPLYDTRAIYSGLEVRYYDLLPEKDWEIDLDGVEALAD 197 (447)
T ss_pred cCCCCccCcCceEEeccchHHHHHHHHHhcCCCCceecCCCCCchHHHhhhhcCceeEeecccCcccceechHHHHHhhc
Confidence 98888899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCC
Q 014936 172 QNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPG 251 (415)
Q Consensus 172 ~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G 251 (415)
++|.++++.||+||.|.+++.+.|++|++.|+++++.+|.||+|.+++|++.++.++..+.....|+.+++.||.|..||
T Consensus 198 ENT~AivviNP~NPcGnVys~~HL~kiae~A~klgi~vIaDEVY~~~vfg~~pfvpmg~fssiVPVitlggisKrW~VPG 277 (447)
T KOG0259|consen 198 ENTVAIVVINPNNPCGNVYSEDHLKKIAETAKKLGIMVIADEVYGHTVFGDKPFVPMGKFSSIVPVITLGGISKRWIVPG 277 (447)
T ss_pred cCeeEEEEeCCCCCCcccccHHHHHHHHHHHHHhCCeEEehhhcceeecCCCCccchhhccccCceEeecccccccccCC
Confidence 99999999999999999999999999999999999999999999999999999999999998889999999999999999
Q ss_pred ceEEEEEeeCCCCCCChHHHHHHHHhhccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcC
Q 014936 252 WRLGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISC 331 (415)
Q Consensus 252 ~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~ 331 (415)
||+||++..++..++.+....+.+..+......++++.|.|+..+|+.-.++++.+....++.+.+.-.+.|+++|++.|
T Consensus 278 WRlGWi~~hD~~gvf~~~~~~q~~~~~~~~~~~p~TiiQ~AlP~IL~kTp~efF~k~~~~lk~na~l~y~~Lk~IP~l~c 357 (447)
T KOG0259|consen 278 WRLGWIALHDPRGVFRDTKVVQGIKNFLDIIPGPATIIQGALPDILEKTPEEFFDKKLSFLKSNADLCYSRLKDIPCLTC 357 (447)
T ss_pred ceeeeEEEecccccccchHHHHHHHHHHhccCCccHhHHHHhHHHHHhChHHHHHHHHHHHHhhHHHHHHHHhcCCCccc
Confidence 99999999999999999888899999988888999999999999999887899999999999999999999999999998
Q ss_pred CCCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEeeCChhhHHHHHHHHHHHHHHHHHH
Q 014936 332 PHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFAVDPYSLEECLDRIKSFYQRHAKQ 411 (415)
Q Consensus 332 ~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~~~l~~~l~~l~~~~~~~~~~ 411 (415)
...|++..|+|+.++..-+.+..++.+|+..|.+|+.+.+.||..|+.++|+|++++.+.+.+++++.||+++..++.++
T Consensus 358 p~kPeg~mylmv~l~~s~~~~~~dD~dFc~kL~~Eesv~~LPG~af~~~nw~Ri~i~~~~~~leea~~Rik~Fc~RH~~~ 437 (447)
T KOG0259|consen 358 PVKPEGCMYLMVKLNLSLFPDIEDDVDFCQKLAREESVICLPGQAFGLKNWLRIVITVEEEMLEEAFSRIKEFCDRHSKE 437 (447)
T ss_pred CcCCCcceEEEeccchhhhccccccHHHHHHHhhhcceEEeccccccCCCeEEEEEccChHHHHHHHHHHHHHHHhhhhc
Confidence 88999999999999888777888999999999999999999999999999999999999999999999999999998854
Q ss_pred h
Q 014936 412 L 412 (415)
Q Consensus 412 ~ 412 (415)
+
T Consensus 438 ~ 438 (447)
T KOG0259|consen 438 Q 438 (447)
T ss_pred c
Confidence 3
No 2
>COG0436 Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=7.4e-60 Score=439.68 Aligned_cols=357 Identities=29% Similarity=0.512 Sum_probs=320.4
Q ss_pred cceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCc-EEEeCChHHHH
Q 014936 35 KKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPND-VFVTSGCTQAI 113 (415)
Q Consensus 35 ~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~-i~i~~g~~~al 113 (415)
.++|+|+.|+|+ +++++.+++++.+.+..+.. .|.+..|.++||++||+++.+.+|..+++++ |++|+|+++++
T Consensus 28 ~~vi~l~iG~Pd----~~~p~~i~~a~~~a~~~~~~-~Y~~~~G~~~LReaia~~~~~~~~~~~~~~~eiivt~Ga~~al 102 (393)
T COG0436 28 EDVIDLSIGEPD----FPTPEHIIEAAIEALEEGGT-HYTPSAGIPELREAIAEKYKRRYGLDVDPEEEIIVTAGAKEAL 102 (393)
T ss_pred CCEEEeCCCCCC----CCCCHHHHHHHHHHHhcccC-CCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEEeCCHHHHH
Confidence 679999999976 88899999999999887543 6778899999999999999999998888876 99999999999
Q ss_pred HHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCC-CCCCCChhHHHhhcCCCceEEEecCCCCccccCCCH
Q 014936 114 DVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPD-KGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSY 192 (415)
Q Consensus 114 ~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~ 192 (415)
..++.+++++||+|++++|.|+.|.......|.+++.++...+ ++|.+|++.|+++++++||++++++||||||.+++.
T Consensus 103 ~~~~~a~~~pGDeVlip~P~Y~~y~~~~~~~gg~~v~v~l~~~~~~f~~d~~~l~~~i~~ktk~i~ln~P~NPTGav~~~ 182 (393)
T COG0436 103 FLAFLALLNPGDEVLIPDPGYPSYEAAVKLAGGKPVPVPLDEEENGFKPDLEDLEAAITPKTKAIILNSPNNPTGAVYSK 182 (393)
T ss_pred HHHHHHhcCCCCEEEEeCCCCcCHHHHHHhcCCEEEEEeCCcCccCCcCCHHHHHhhcCccceEEEEeCCCCCcCcCCCH
Confidence 9999999999999999999999999999999999999997655 489999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCC-CCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHH
Q 014936 193 QHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS-TVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKV 271 (415)
Q Consensus 193 ~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~ 271 (415)
+++++|+++|++||+++|.||+|..+.|++..+.++..+.. .+++|.+.||||.|+++|||+||+++++ .++
T Consensus 183 ~~l~~i~~~a~~~~i~ii~DEiY~~l~yd~~~~~s~~~~~~~~~~~i~i~s~SK~~~mtGwRvG~~v~~~-------~~l 255 (393)
T COG0436 183 EELKAIVELAREHDIIIISDEIYEELVYDGAEHPSILELAGARDRTITINSFSKTYGMTGWRIGWVVGPP-------EEL 255 (393)
T ss_pred HHHHHHHHHHHHcCeEEEEehhhhhcccCCCCcCCHhhcCCCcceEEEEecccccccccccceeEeecCh-------HHH
Confidence 99999999999999999999999999999875666655554 4789999999999999999999999974 257
Q ss_pred HHHHHhh-ccccCCchhHHHHHHHHhhCCCc-HHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCccc
Q 014936 272 VERMKKY-FDILGDPATFIQAAVPSILQQPD-EVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSL 349 (415)
Q Consensus 272 ~~~~~~~-~~~~~~~~~~~~~a~~~~l~~~~-~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~ 349 (415)
++.+... .....+++.+.|.++..+|+... ..+.+..++.++++|+.+.+.|.+++++.+...|.+++|+|++++..
T Consensus 256 ~~~~~~~~~~~~~~~~~~~Q~aa~~aL~~~~~~~~~~~~~~~~~~rrd~l~~~l~~~~g~~~~~~p~Ga~Y~~~~i~~~- 334 (393)
T COG0436 256 IAALRKLKSYLTSCAPTPAQYAAIAALNGPQSDEVVEEMREEYRERRDLLVEALNEIGGLSVVKPPEGAFYLFPKIPEL- 334 (393)
T ss_pred HHHHHHHHHhcccCCCHHHHHHHHHHhcCccchHHHHHHHHHHHHHHHHHHHHHHhcCCeeeccCCCeeEEEEeecCCC-
Confidence 7777755 34556899999999999998754 36788888999999999999999998888553488999999999753
Q ss_pred cCCCCCHHHHHHHHHhhcCeEEEcCCCCCCC---CeEEEEeeCChhhHHHHHHHHHHHHHHH
Q 014936 350 LDDIIDDIDFCFKLAKEESVIILPGTAVGLK---NWLRVTFAVDPYSLEECLDRIKSFYQRH 408 (415)
Q Consensus 350 ~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~---~~iRi~~~~~~~~l~~~l~~l~~~~~~~ 408 (415)
.++.+++.+|+++.||.+.||+.|+.+ ++||++++.+++++++++++|.++++.+
T Consensus 335 ----~d~~~f~~~Ll~~~gV~v~PG~~Fg~~~g~~~vRis~~~~~~~l~~a~~rl~~~~~~~ 392 (393)
T COG0436 335 ----LDSEEFAKKLLEEAGVAVVPGSGFGEPPGEGYVRLSLATSEETLEEALRRLARFLAEY 392 (393)
T ss_pred ----CCHHHHHHHHHHhCCEEEecccccCCCCCCCeEEEEEecCHHHHHHHHHHHHHHHHhc
Confidence 378999999999999999999999975 8999999998899999999999988753
No 3
>PLN00145 tyrosine/nicotianamine aminotransferase; Provisional
Probab=100.00 E-value=6.2e-59 Score=442.41 Aligned_cols=397 Identities=61% Similarity=1.112 Sum_probs=337.3
Q ss_pred hhHHHHHHHhhhcccccccCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhC
Q 014936 15 ITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDL 94 (415)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~ 94 (415)
.+++..+..+.....+...+.++|+|+.|+|+..+++++++.+.+++.+.+.......|++..|.+++|+++++++++.+
T Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~i~l~~G~P~~~~~~~~~~~~~~a~~~al~~~~~~~Y~~~~G~~~lr~aia~~~~~~~ 111 (430)
T PLN00145 32 LSIRAVLNRVKACVDAGGGPRPVLPLGHGDPSAFPCFRTAPEAEDAVAAALRSGKYNSYSTCVGLLPARRAIAEYLSRDL 111 (430)
T ss_pred cchhhHHHHHHHhhhcccCCCCeeeCCCCCCCCCCCCCCCHHHHHHHHHHHHcCcCCCCCCCccCHHHHHHHHHHHhhcc
Confidence 34555555554444321126789999999999888889999999999998876656689998999999999999999888
Q ss_pred CCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCc
Q 014936 95 PYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNT 174 (415)
Q Consensus 95 ~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 174 (415)
+.++++++|++|+|+++++.+++.++.++||+|+++.|+|+.|...+...|+++..++..++++|.+|++.+++.+++++
T Consensus 112 ~~~~~~~~v~it~G~~~al~l~~~~l~~~Gd~Vlv~~P~y~~y~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~ 191 (430)
T PLN00145 112 PYELSTDDIYLTAGCAQAIEIIMSVLAQPGANILLPRPGYPLYEARAVFSGLEVRHFDLLPERGWEVDLEGVEALADENT 191 (430)
T ss_pred CCCCChhhEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCccHHHHHHHcCCEEEEeeCCcccCCcCCHHHHHHHhCcCc
Confidence 88899999999999999999999999999999999999999999999999999999988777789999999999998899
Q ss_pred eEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceE
Q 014936 175 VALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRL 254 (415)
Q Consensus 175 ~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~ 254 (415)
+++++++|+||||.+++.+++++|+++|+++|+++|+||+|.++.|++....++..++...++|+++||||.|++||||+
T Consensus 192 ~~i~i~~P~NPtG~v~~~~~l~~i~~~a~~~~i~ii~De~Y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pG~Rl 271 (430)
T PLN00145 192 VAMVIINPNNPCGSVYSYEHLAKIAETARKLGILVIADEVYDHLTFGSKPFVPMGVFGEVAPVLTLGSISKRWVVPGWRL 271 (430)
T ss_pred eEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEeccchhhccCCCCccchhhhcccCcEEEEeccccccCCCCeeE
Confidence 99999999999999999999999999999999999999999999987665566666666678999999999999999999
Q ss_pred EEEEeeCCCCCCChHHHHHHHHhhccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCC
Q 014936 255 GWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHK 334 (415)
Q Consensus 255 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~ 334 (415)
||++++++..+....++.+.++........++.+.|.++..+|+...+.++++.++.++++++.+.+.|++++++.++..
T Consensus 272 G~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~g~~~~~~ 351 (430)
T PLN00145 272 GWIATCDPNGILKETKVVDSIRNYLNISTDPATFVQGAIPQIIANTKEEFFTKTLGLLKETADICYEKIKEIKCITCPHK 351 (430)
T ss_pred EEEEEecchhhhhhhHHHHHHHHHhcccCCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCcC
Confidence 99998654322211123344555444444568899999999998644688999999999999999999999888874447
Q ss_pred CCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEeeCChhhHHHHHHHHHHHHHHHHHH
Q 014936 335 PEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFAVDPYSLEECLDRIKSFYQRHAKQ 411 (415)
Q Consensus 335 p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~~~l~~~l~~l~~~~~~~~~~ 411 (415)
|++|+|+|++++...+++..++.+++..+++++||.+.||..|+.++|+||+++.+.+++++++++|++++.++.++
T Consensus 352 P~ga~y~~v~l~~~~~~~~~~~~~~~~~ll~~~gV~v~pG~~fg~~~~lRis~~~~~~~l~~al~rl~~~~~~~~~~ 428 (430)
T PLN00145 352 PEGSMFVMVKLDLSCLSGIKDDMDFCCKLAKEESVVVLPGSALGMKNWLRITFAIDPPSLEDGLERLKSFCLRHAKL 428 (430)
T ss_pred CCeeeEEEeccChhhcCCCCCHHHHHHHHHHhCCEEEeCccccCCCCeEEEEeCCCHHHHHHHHHHHHHHHHHhccc
Confidence 99999999998753332333577889899999999999999999899999999988999999999999999887654
No 4
>PLN02656 tyrosine transaminase
Probab=100.00 E-value=2.6e-58 Score=437.28 Aligned_cols=397 Identities=82% Similarity=1.343 Sum_probs=339.5
Q ss_pred hhhHHHHHHHhhhcccccccCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhh
Q 014936 14 IITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRD 93 (415)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~ 93 (415)
..++...++.++++..++.+++++++|+.|+|+..+++++++.+++++.+.+.......|++..|.+++|+++++++++.
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~i~l~~G~p~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~ 89 (409)
T PLN02656 10 TITIKGILSLLMESIDDEENGKRVISLGMGDPTAYSCFHTTHVAQEAVVDALQSNKFNGYAPTVGLPQARRAIAEYLSRD 89 (409)
T ss_pred hhhhhhHHHHHHHhccccccCCeeeecCCCCCCcCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHHHh
Confidence 34578888888888876678899999999999876678889999999999888765678998899999999999999988
Q ss_pred CCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCC
Q 014936 94 LPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQN 173 (415)
Q Consensus 94 ~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 173 (415)
+|..+++++|++|+|+++++..++.+++++||+|++++|+|+.+...+...|+++..++.++++++.+|++.+++.++++
T Consensus 90 ~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~i~~~~~~~~~~d~~~l~~~~~~~ 169 (409)
T PLN02656 90 LPYKLSLDDVFITSGCTQAIDVALSMLARPGANILLPRPGFPIYELCAAFRHLEVRYVDLLPEKGWEVDLDAVEALADQN 169 (409)
T ss_pred cCCCCCcccEEEeCChHHHHHHHHHHHhCCCCeEEEeCCCCCcHHHHHHHcCCEEEEEeCCCcCCCCCCHHHHHHHhccC
Confidence 88889999999999999999999999999999999999999999888888999999999876667889999999999888
Q ss_pred ceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCce
Q 014936 174 TVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWR 253 (415)
Q Consensus 174 ~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r 253 (415)
++++++++|+||||.+++.+++++|+++|+++|+++|+||+|.++.+++....++..++...++|+++||||.|+++|+|
T Consensus 170 ~~~v~l~~P~NPtG~~~s~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~f~~pGlR 249 (409)
T PLN02656 170 TVALVIINPGNPCGNVYSYQHLKKIAETAEKLKILVIADEVYGHLAFGSNPFVPMGVFGSIVPVLTLGSLSKRWIVPGWR 249 (409)
T ss_pred ceEEEEECCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEehhhhhcccCCCCcccHHHhcccCcEEEEcccchhccCccee
Confidence 99999999999999999999999999999999999999999999998775555555555566899999999999999999
Q ss_pred EEEEEeeCCCCCCChHHHHHHHHhhccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCC
Q 014936 254 LGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPH 333 (415)
Q Consensus 254 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~ 333 (415)
+||++++++..+..++++++.+........+++.+.|.++..+|++..+.++++.++.++++++.+.+.|++++++..+.
T Consensus 250 iG~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~q~a~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~L~~~~~~~~~~ 329 (409)
T PLN02656 250 LGWFVTTDPSGSFRDPKIVERIKKYFDILGGPATFIQAAVPTILEQTDESFFKKTINILKQSSDICCDRIKEIPCITCPH 329 (409)
T ss_pred EEEEEEeCcccccccHHHHHHHHHHHhhhcCCCHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHhhCCCCcCCc
Confidence 99999965333322346777777664433467889999999999764467899999999999999999999886554234
Q ss_pred CCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEeeCChhhHHHHHHHHHHHHHHHHH
Q 014936 334 KPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFAVDPYSLEECLDRIKSFYQRHAK 410 (415)
Q Consensus 334 ~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~~~l~~~l~~l~~~~~~~~~ 410 (415)
.|.+|+|+|++++.....+..++.+++..+++++||.+.||+.|+.++++||+++.+++++++++++|++++.+++.
T Consensus 330 ~p~gg~~~w~~l~~~~~~~~~~~~~~~~~~l~~~gV~v~pg~~fg~~~~iRi~~~~~~e~l~eal~rl~~~~~~~~~ 406 (409)
T PLN02656 330 KPEGSMAVMVKLNLSLLEDISDDIDFCFKLAREESVIILPGTAVGLKNWLRITFAADPSSLEEALGRIKSFYLRHSK 406 (409)
T ss_pred CCCeEEEEEEecchhhcCCCCCHHHHHHHHHHhCCEEEecchhcCCCCeEEEEeCCCHHHHHHHHHHHHHHHHHhcc
Confidence 78999999999864322222235567777888899999999999888999999998999999999999999887654
No 5
>PLN02187 rooty/superroot1
Probab=100.00 E-value=5.2e-58 Score=438.70 Aligned_cols=394 Identities=52% Similarity=0.979 Sum_probs=332.6
Q ss_pred hhHHHHHHHhhhcccccccCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhC
Q 014936 15 ITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDL 94 (415)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~ 94 (415)
++++..++.+.+...+ ..++++++|+.|+|+..+.+.+++.+.+++.+.+..+....|++..|.+++|+++|+|+++.+
T Consensus 47 ~~~~~~~~~~~~~~~~-~~~~~vi~l~~Gdp~~~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lR~aiA~~~~~~~ 125 (462)
T PLN02187 47 VTLRGVIYMLFDNCGK-DVNKTILPLGHGDPSVYPCFRTCIEAEDAVVDVLRSGKGNSYGPGAGILPARRAVADYMNRDL 125 (462)
T ss_pred chHhhHHHHHHhhccc-CCCCCeEECCCCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCChHHHHHHHHHHHHHhc
Confidence 4677777777655532 336789999999998777778889999999998886666689888999999999999999888
Q ss_pred CCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCc
Q 014936 95 PYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNT 174 (415)
Q Consensus 95 ~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 174 (415)
+.++++++|++|+|+++++.+++.+++++||+|++++|+|+.|...++..|+++..++..++++|.+|++.+++++++++
T Consensus 126 ~~~~~~~~I~it~G~~~al~~~~~~l~~pGd~Vlv~~P~y~~y~~~~~~~g~~~~~~~l~~~~~~~~d~~~l~~~~~~~~ 205 (462)
T PLN02187 126 PHKLTPEDIFLTAGCNQGIEIVFESLARPNANILLPRPGFPHYDARAAYSGLEVRKFDLLPEKEWEIDLEGIEAIADENT 205 (462)
T ss_pred CCCCCcccEEEeCCHHHHHHHHHHHhcCCCCEEEEeCCCCccHHHHHHHcCCEEEEEeCccccCCccCHHHHHHhcCCCc
Confidence 88999999999999999999999999999999999999999999999999999999998766778999999999998889
Q ss_pred eEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceE
Q 014936 175 VALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRL 254 (415)
Q Consensus 175 ~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~ 254 (415)
+++++++||||||.+++.+++++|+++|+++|+++|+||+|.++.|++..+.++..+....++++++||||.|++||+|+
T Consensus 206 ~~v~i~nP~NPTG~v~s~e~l~~i~~~a~~~~i~iI~DE~Y~~l~f~~~~~~s~~~~~~~~~vi~l~SfSK~f~~pGlRi 285 (462)
T PLN02187 206 VAMVVINPNNPCGNVYSHDHLKKVAETARKLGIMVISDEVYDRTIFGDNPFVSMGKFASIVPVLTLAGISKGWVVPGWKI 285 (462)
T ss_pred EEEEEeCCCCCCCCccCHHHHHHHHHHHHHCCCEEEEeccccccccCCCCceeHHHhccCCcEEEEecchhhcCCcccee
Confidence 99999999999999999999999999999999999999999999987655555655655557999999999999999999
Q ss_pred EEEEeeCCCCCCChHHHHHHHHhhcc---ccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcC
Q 014936 255 GWFVTTDPCGMFRKPKVVERMKKYFD---ILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISC 331 (415)
Q Consensus 255 G~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~ 331 (415)
||++++++..+. ++++.+..... ...+++.+.|.++..+|++..+.++++.++.++++++.+.+.|++++++.+
T Consensus 286 G~~v~~~p~~~~---~~~~~~~~~~~~~~~~~~~s~~~Q~a~~~~L~~~~~~~l~~~~~~l~~~r~~l~~~L~~~~~~~~ 362 (462)
T PLN02187 286 GWIALNDPEGVF---ETTKVLQSIKQNLDVTPDPATIIQAALPAILEKADKNFFAKKNKILKHNVDLVCDRLKDIPCVVC 362 (462)
T ss_pred EEEEecCchhHH---HHHHHHHHHHHhccccCCCCHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHhhCCCCcC
Confidence 999986532111 12334433322 223457899999999997544689999999999999999999998865543
Q ss_pred CCCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEeeCChhhHHHHHHHHHHHHHHHHHH
Q 014936 332 PHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFAVDPYSLEECLDRIKSFYQRHAKQ 411 (415)
Q Consensus 332 ~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~~~l~~~l~~l~~~~~~~~~~ 411 (415)
+..|++|+|+|++++....++..++.+++..++.++||.+.||..|+.+++|||+++.+++.+++++++|.++++++.++
T Consensus 363 ~~~P~gg~fl~~~l~~~~~~~~~~~~~~~~~ll~~~gV~v~pG~~fg~~~~iRis~~~~~e~l~~al~rL~~~l~~~~~~ 442 (462)
T PLN02187 363 PKKPESCTYLLTKLELSLMDNIKDDIDFCVKLAREENLVFLPGDALGLKNWMRITIGVEAHMLEDALERLKGFCTRHAKK 442 (462)
T ss_pred CCCCCEeEEEEeecChhhCCCCCCHHHHHHHHHhhCCEEEECccccCCCCeEEEEeCCCHHHHHHHHHHHHHHHHHhhhc
Confidence 34688999999988643222222466788888889999999999998889999999989999999999999999988775
Q ss_pred h
Q 014936 412 L 412 (415)
Q Consensus 412 ~ 412 (415)
.
T Consensus 443 ~ 443 (462)
T PLN02187 443 T 443 (462)
T ss_pred c
Confidence 4
No 6
>PLN00143 tyrosine/nicotianamine aminotransferase; Provisional
Probab=100.00 E-value=4e-57 Score=428.75 Aligned_cols=402 Identities=57% Similarity=1.061 Sum_probs=330.3
Q ss_pred ccCCcchhhHHHHHHHhhhcccccccCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHH
Q 014936 8 IDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIA 87 (415)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia 87 (415)
.+..++..++.+.+.++++.... ..++++|+|+.|+|+.+..+++++.+++++.+.+.......|+++.|.++||++||
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~l~~G~p~~~~~~~~p~~~~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia 84 (409)
T PLN00143 6 LKTEPPSYSIDDAVKFLKENFNE-DDHRLAISFGFGDPSCFECFRTTNIAEDAIVEAVRSAKFNSYAPTGGILPARRAIA 84 (409)
T ss_pred cCCCcccchHHHHHHHHHHhccc-CCCCceeeCCCCCCCCCCCCCCCHHHHHHHHHHHhCcCCCCCCCCCCCHHHHHHHH
Confidence 34455555566666655554422 34789999999998755558889999999999888665667988899999999999
Q ss_pred HHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHH
Q 014936 88 EYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIE 167 (415)
Q Consensus 88 ~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~ 167 (415)
+|+.+.+|.++++++|++|+|+++++..++.+++++||.|+++.|+|+.+...++..|+++..++..++++|.+|+++|+
T Consensus 85 ~~~~~~~g~~~~~~~I~it~G~~~al~~~~~~l~~~gd~v~v~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~ 164 (409)
T PLN00143 85 DYLSNDLPYQLSPDDVYLTLGCKHAAEIIIKVLARPEANILLPRPGFPDVETYAIFHHLEIRHFDLLPEKGWEVDLDAVE 164 (409)
T ss_pred HHHHhhcCCCCCHhhEEEecChHHHHHHHHHHHcCCCCEEEEcCCCCcCHHHHHHHcCCEEEEEeccCCCCCcCCHHHHH
Confidence 99998888889999999999999999999999999999999999999999999999999999998866667889999999
Q ss_pred hhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCcccc
Q 014936 168 SLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRW 247 (415)
Q Consensus 168 ~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~ 247 (415)
++++++++++++++||||||.+++.+++++|+++|+++|+++|+||+|.++.+++....++..+...+++|+++||||.|
T Consensus 165 ~~~~~~~~~~~~~nP~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~vi~~~SfSK~f 244 (409)
T PLN00143 165 AIADENTIAMVIINPGNPCGSVYSYEHLNKIAETARKLGILVIADEVYGHIVFGSKPFVPMGLFASIVPVITLGSISKRW 244 (409)
T ss_pred HhcccCCEEEEEECCCCCCCCccCHHHHHHHHHHHHHcCCeEEEEccccccccCCCCCcchhhhcccCcEEEEccchhhc
Confidence 99888899999999999999999999999999999999999999999999998765444555555556899999999999
Q ss_pred CCCCceEEEEEeeCCCCCCChHHHHHHHHhhccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCC
Q 014936 248 IVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIP 327 (415)
Q Consensus 248 ~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~ 327 (415)
+++|+|+||++++++..+....+.++.+.........++.+.|.++..+|++....++++.++.++++++.+.+.|++++
T Consensus 245 ~~pGlRvG~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~ 324 (409)
T PLN00143 245 MIPGWGLGWLVTCDPSGLLQICEIADSIKKALNPAPFPPTFIQAAIPEILEKTTEDFFSKTINILRAALAFCYDKLKEIP 324 (409)
T ss_pred CCCccceEEEEeeCchhhhhhHHHHHHHHHHHhccCCCCchHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 99999999999854321110001233444333223345778999999999754467899999999999999999998875
Q ss_pred CCcCCCCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEeeCChhhHHHHHHHHHHHHHH
Q 014936 328 CISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFAVDPYSLEECLDRIKSFYQR 407 (415)
Q Consensus 328 ~~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~~~l~~~l~~l~~~~~~ 407 (415)
+..+...|++|+|+|++++....++..++.+++..++.++||.+.||..|+.++++||+++.+++++++++++|++++++
T Consensus 325 ~~~~~~~p~gg~f~w~~l~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~~iRi~~~~~~~~l~~al~rl~~~l~~ 404 (409)
T PLN00143 325 CIMCPQKAEGAFFALVKLNLLLLEDIEDDMEFCLKLAKEESLIILPGVTVGLKNWLRITFAVEQSSLEDGLGRLKSFCGR 404 (409)
T ss_pred CCCCCCCCCeeEEEEEecchhhcCCCCCHHHHHHHHHHhCCEEEeCccccCCCCeEEEEEcCCHHHHHHHHHHHHHHHHH
Confidence 54423368899999999974211122246778888888899999999999888999999998899999999999999987
Q ss_pred HHH
Q 014936 408 HAK 410 (415)
Q Consensus 408 ~~~ 410 (415)
+.+
T Consensus 405 ~~~ 407 (409)
T PLN00143 405 HAK 407 (409)
T ss_pred hcc
Confidence 654
No 7
>PTZ00433 tyrosine aminotransferase; Provisional
Probab=100.00 E-value=2.4e-54 Score=410.77 Aligned_cols=387 Identities=35% Similarity=0.634 Sum_probs=323.2
Q ss_pred hHHHHHHHhhhcccccccCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhC-
Q 014936 16 TIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDL- 94 (415)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~- 94 (415)
++....+.+.+. .+++++++|+.|+|+..+++.+++.+.+++.+.+.......|+++.|.++||++||+|+++.+
T Consensus 18 ~~~~~~~~~~~~----~~~~~~i~l~~g~p~~~~~~~p~~~~~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~~ 93 (412)
T PTZ00433 18 PLRTVTDNAKPS----PSPKSIIKLSVGDPTLDGNLLTPAIQTKALVEAVDSQECNGYPPTVGSPEAREAVATYWRNSFV 93 (412)
T ss_pred cHHHHHHhhccC----CCCCCeeecCCcCCCCcCCCCCCHHHHHHHHHHhhcCCCCCCCCCCCcHHHHHHHHHHHHhhcc
Confidence 455555555433 258899999999987554567789999999998876555689998999999999999998743
Q ss_pred -----CCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhh
Q 014936 95 -----PYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESL 169 (415)
Q Consensus 95 -----~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~ 169 (415)
+..+++++|++|+|+++++..++.+++++||+|+++.|+|..+...++..|+++..++.++++++++|++++++.
T Consensus 94 ~~~~~~~~~~~~~i~it~G~~~al~~~~~~~~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~i~~~~~~~~~~d~~~l~~~ 173 (412)
T PTZ00433 94 HKESLKSTIKKDNVVLCSGVSHAILMALTALCDEGDNILVPAPGFPHYETVCKAYGIEMRFYNCRPEKDWEADLDEIRRL 173 (412)
T ss_pred ccccccCCCChhhEEEeCChHHHHHHHHHHhcCCCCEEEEccCCcccHHHHHHHcCCEEEEEecCccccCcCCHHHHHHH
Confidence 456889999999999999999999999999999999999999999999999999999987666788999999998
Q ss_pred cCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCC
Q 014936 170 ADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIV 249 (415)
Q Consensus 170 ~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~ 249 (415)
++++++++++++||||||.+++.+++++|+++|+++|+++|+||+|.++.+++....++..+....++|+++||||.|++
T Consensus 174 ~~~~~~~i~~~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~~~ 253 (412)
T PTZ00433 174 VDDRTKALIMTNPSNPCGSNFSRKHVEDIIRLCEELRLPLISDEIYAGMVFNGATFTSVADFDTTVPRVILGGTAKNLVV 253 (412)
T ss_pred hccCceEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCCeEEEeccccccccCCCCccchhhccCCCceEEEccchhhcCC
Confidence 88889999999999999999999999999999999999999999999998876544455555544568999999999999
Q ss_pred CCceEEEEEeeCCCCCCChHHHHHHHHhhccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCC
Q 014936 250 PGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCI 329 (415)
Q Consensus 250 ~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~ 329 (415)
+|+|+||++++++... .+++++.+........+++++.|.++..++.+..+.++++.++.++++++.+.+.|+++.++
T Consensus 254 pGlRlG~~i~~~p~~~--~~~~~~~~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~ 331 (412)
T PTZ00433 254 PGWRLGWLLLVDPHGN--GGDFLDGMKRLGMLVCGPCSVVQAALGEALLNTPQEHLEQIVAKLEEGAMVLYNHIGECIGL 331 (412)
T ss_pred CCeeEEEEEEeCCccc--HHHHHHHHHHHhhccCCCChHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 9999999997432211 12466666665433457888999999999876446889999999999999999999986577
Q ss_pred cCCCCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEeeCChhhHHHHHHHHHHHHHHHH
Q 014936 330 SCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFAVDPYSLEECLDRIKSFYQRHA 409 (415)
Q Consensus 330 ~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~~~l~~~l~~l~~~~~~~~ 409 (415)
. +..|++|+|+|++++.....+..++.+++..+++++||.+.||..|+.++++||+++.+++++++++++|.+++++++
T Consensus 332 ~-~~~p~gg~f~~~~l~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~~iRis~~~~~e~l~~al~~l~~~~~~~~ 410 (412)
T PTZ00433 332 S-PTMPRGSMFLMSRLDLEKFRDIKSDVEFYEKLLEEENVQVLPGEIFHMPGFTRLTISRPVEVLREAVERIKAFCERHK 410 (412)
T ss_pred c-ccCCCeeEEEEEEechhhcCCCCCHHHHHHHHHHhcCEEEeCccccCCCCeEEEEecCCHHHHHHHHHHHHHHHHHhc
Confidence 6 557899999999986422112224678888888778999999999988899999999889999999999999998665
No 8
>PRK13355 bifunctional HTH-domain containing protein/aminotransferase; Provisional
Probab=100.00 E-value=3.2e-54 Score=419.90 Aligned_cols=394 Identities=23% Similarity=0.415 Sum_probs=315.9
Q ss_pred ccccCCccCCcchhhHHHHHHHhhhcccccccCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHH
Q 014936 2 EISNGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPL 81 (415)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~ 81 (415)
+.|++.....++ .+..+........ ..+.++++|+.|+|... ++++++.+++++.+.+.. ...|+++.|.++
T Consensus 118 ~~~~~~~~~~~~--~~~~~~~~~~~~~---~~g~~~i~l~~G~p~~~-~~~~p~~~~~~~~~~~~~--~~~Y~~~~G~~~ 189 (517)
T PRK13355 118 KKSHKLDNVLYD--VRGPVVDEANRME---AAGTHILKLNIGNPAPF-GFRTPDEVVYDMAQQLTD--TEGYSDSKGLFS 189 (517)
T ss_pred ChhHHhhccCcc--HHHHHHHHHHHHH---HcCCCeEEecCcCCCcC-CCCCCHHHHHHHHHHhhc--CCCCCCCcChHH
Confidence 345555555555 2332333222221 34789999999998654 367788999999887763 347999999999
Q ss_pred HHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCC
Q 014936 82 TRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEV 161 (415)
Q Consensus 82 lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~ 161 (415)
||++||+|+.+..+.++++++|++|+|+++++.+++.+++++||+|++++|+|+.|...++..|.+++.++.+++++|.+
T Consensus 190 lReaia~~~~~~~~~~~~~~~I~it~G~~eal~~~~~~l~~~Gd~Vli~~P~y~~y~~~~~~~g~~~v~~~~~~~~~~~~ 269 (517)
T PRK13355 190 ARKAIMQYAQLKGLPNVDVDDIYTGNGVSELINLSMSALLDDGDEVLIPSPDYPLWTACVNLAGGTAVHYRCDEQSEWYP 269 (517)
T ss_pred HHHHHHHHHHhcCCCCCChhHEEEeCcHHHHHHHHHHHhCCCCCEEEEcCCCCcCHHHHHHHCCCEEEEeecCcccCCCC
Confidence 99999999987666568999999999999999999999999999999999999999999999999999999877778999
Q ss_pred ChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEc
Q 014936 162 DLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLG 241 (415)
Q Consensus 162 ~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 241 (415)
|+++++++++++++++++++||||||.+++.+++++|+++|++||++||+||+|..+.+++....++..+..+..+++++
T Consensus 270 d~~~l~~~~~~~~k~i~i~nP~NPTG~v~~~~~l~~i~~~a~~~~~~ii~DE~Y~~~~~~~~~~~s~~~~~~~~~vi~~~ 349 (517)
T PRK13355 270 DIDDIRSKITSRTKAIVIINPNNPTGALYPREVLQQIVDIAREHQLIIFSDEIYDRLVMDGLEHTSIASLAPDLFCVTFS 349 (517)
T ss_pred CHHHHHHhcCcCceEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEehhhhhhcCCCCCcccHHHhCCCCeEEEEe
Confidence 99999999988999999999999999999999999999999999999999999999998876556666665544578889
Q ss_pred cCccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhhccccCCchhHHHHHHHHhhCCCc--HHHHHHHHHHHHHHHHHH
Q 014936 242 SLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQAAVPSILQQPD--EVFFKKTLNLLKQSVDIC 319 (415)
Q Consensus 242 s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~--~~~~~~~~~~~~~~~~~l 319 (415)
||||.|+++|+|+||++++....+. .++++.+........+.+.++|.++..+|.... .+++.+. .++.++++.+
T Consensus 350 S~SK~~~~~G~RiG~~i~~~~~~~~--~~~~~~l~~~~~~~~~~~~~~q~a~~~aL~~~~~~~~~~~~~-~~~~~~r~~l 426 (517)
T PRK13355 350 GLSKSHMIAGYRIGWMILSGNKRIA--KDYIEGLNMLANMRLCSNVPAQSIVQTALGGHQSVKDYLVPG-GRVYEQRELV 426 (517)
T ss_pred cchhhccCcccceEEEEeeCchhhH--HHHHHHHHHHhcCcCCcChHHHHHHHHHhcCCccHHHHHHHH-HHHHHHHHHH
Confidence 9999999999999999975321110 023444443333335678889999999996432 3455554 3455668999
Q ss_pred HHHhhcCCCCcCCCCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCC--CCeEEEEeeCChhhHHHH
Q 014936 320 YNKIKEIPCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGL--KNWLRVTFAVDPYSLEEC 397 (415)
Q Consensus 320 ~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~--~~~iRi~~~~~~~~l~~~ 397 (415)
.+.|+++|++. +..|++++|+|++++....+ ..++.+++..+|.++||.+.||+.|+. +++|||+++.++++|+++
T Consensus 427 ~~~L~~~~g~~-~~~p~g~fy~~~~l~~~~~~-~~~~~~~~~~ll~~~gV~v~pg~~F~~~~~~~~Ris~~~~~~~l~~a 504 (517)
T PRK13355 427 YNALNAIPGIS-AVKPKAAFYIFPKIDVKKFN-IHDDEQFALDLLHDKKVLIVQGTGFNWDKPDHFRVVYLPRLEDLEDA 504 (517)
T ss_pred HHHHhcCCCcc-cCCCCeeeEEEeecCcccCC-CCCHHHHHHHHHHhCCEEEeCcchhCCCCcCEEEEEeCCCHHHHHHH
Confidence 99999988888 55899999999988642211 124677888888999999999999963 689999999899999999
Q ss_pred HHHHHHHHHHH
Q 014936 398 LDRIKSFYQRH 408 (415)
Q Consensus 398 l~~l~~~~~~~ 408 (415)
+++|.++++.+
T Consensus 505 ~~rl~~~~~~~ 515 (517)
T PRK13355 505 MDRLADFFSYY 515 (517)
T ss_pred HHHHHHHHHHh
Confidence 99999998764
No 9
>TIGR01265 tyr_nico_aTase tyrosine/nicotianamine aminotransferases. This subfamily of pyridoxal phosphate-dependent enzymes includes known examples of both tyrosine aminotransferase from animals and nicotianamine aminotransferase from barley.
Probab=100.00 E-value=8.7e-54 Score=406.08 Aligned_cols=389 Identities=52% Similarity=0.955 Sum_probs=325.3
Q ss_pred hhHHHHHHHhhhcccccccCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhC
Q 014936 15 ITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDL 94 (415)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~ 94 (415)
+.++++.....+.. ..+.++++|+.|+|...+.+++++.+.+++.+.+.......|++..|.+++|++++++++...
T Consensus 14 ~~~~~~~~~~~~~~---~~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~l~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~ 90 (403)
T TIGR01265 14 NPIRAIVDNLKVKP---NPEKPIIPLSHGDPSVFGNLRTDPEAEEAVKDALRSGKFNGYAPSVGALAAREAVAEYLSSDL 90 (403)
T ss_pred HHHHHHHHHHHHHH---hcCCCeEEeCCCCCCccCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHHhhc
Confidence 44555555444332 236899999999997666688899999999998876555689888999999999999999877
Q ss_pred CCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCc
Q 014936 95 PYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNT 174 (415)
Q Consensus 95 ~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 174 (415)
+..+++++|++|+|+++++.+++.++.++||+|+++.|+|..+...++..|.++..++.++++++.+|++.+++.+.+++
T Consensus 91 ~~~~~~~~ii~t~G~t~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~ 170 (403)
T TIGR01265 91 PGKLTADDVVLTSGCSQAIEICIEALANPGANILVPRPGFPLYDTRAAFSGLEVRLYDLLPEKDWEIDLDGLEALADEKT 170 (403)
T ss_pred CCCCCHHHEEEecChHHHHHHHHHHhCCCCCEEEEeCCCchhHHHHHHHcCCEEEEecCCcccCCccCHHHHHHHhCcCc
Confidence 87788999999999999999999999999999999999999999999999999999888666677899999999988889
Q ss_pred eEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceE
Q 014936 175 VALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRL 254 (415)
Q Consensus 175 ~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~ 254 (415)
+++++++|+||||.+++.+++++|+++|+++|+++|+|++|.++.+++....++..+....++|+++||||.|+++|+|+
T Consensus 171 ~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pGlRi 250 (403)
T TIGR01265 171 VAIVVINPSNPCGSVFSRDHLQKIAEVARKLGIPIIADEIYGHMVFGDAPFIPMASFASIVPVLSLGGISKRWVVPGWRL 250 (403)
T ss_pred cEEEEecCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEccccccccCCCCccchhhhccCCcEEEEeecccccCCCcceE
Confidence 99999999999999999999999999999999999999999999987655556666666567999999999999999999
Q ss_pred EEEEeeCCCCCCChHHHHHHHHhhccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCC
Q 014936 255 GWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHK 334 (415)
Q Consensus 255 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~ 334 (415)
||++++++..+. ..++.+.+.........++.+.|.++..+|++..+.++++.+++++++++.+.+.|+.++++. +..
T Consensus 251 G~~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~-~~~ 328 (403)
T TIGR01265 251 GWIIIHDPHGIF-RDTVLQGLKNLLQRILGPATIVQGALPDILENTPQEFFDGKISVLKSNAELCYEELKDIPGLV-CPK 328 (403)
T ss_pred EEEEEeCchhhh-HHHHHHHHHHHhhhhcCCChHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHhcCCCce-ecC
Confidence 999986432111 012444444443334567889999999999765568899999999999999999999887776 457
Q ss_pred CCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEeeCChhhHHHHHHHHHHHHHHH
Q 014936 335 PEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFAVDPYSLEECLDRIKSFYQRH 408 (415)
Q Consensus 335 p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~~~l~~~l~~l~~~~~~~ 408 (415)
|.+|+|+|++++.....+..++.+++..+++++||.+.||..|+.++++||+++.+++++++++++|.++++++
T Consensus 329 p~~g~f~~~~~~~~~~~~~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~iRis~~~~~~~l~~~l~~l~~~~~~~ 402 (403)
T TIGR01265 329 PEGAMYLMVKLELELFPEIKDDVDFCEKLVREESVICLPGSAFGLPNWVRITITVPESMLEEACSRIKEFCERH 402 (403)
T ss_pred CCceeEEEEeccccccCCCCCHHHHHHHHHHhCCEEEeCccccCCCCeEEEEecCCHHHHHHHHHHHHHHHHhc
Confidence 99999999999753221122567788888888999999999998889999999988899999999999988654
No 10
>PRK07681 aspartate aminotransferase; Provisional
Probab=100.00 E-value=7.8e-54 Score=406.14 Aligned_cols=378 Identities=19% Similarity=0.325 Sum_probs=314.8
Q ss_pred CccccCCccCCcchhhHHHHHHHhhhcccccccCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcH
Q 014936 1 MEISNGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLP 80 (415)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~ 80 (415)
|+++.+.....++ .+........... ..++++++|+.|+|+ +++++.+++++.+.+.....+.|++ .|.+
T Consensus 3 ~~~~~~~~~~~~~--~~~~~~~~~~~~~---~~~~~~i~l~~g~p~----~~~~~~~~~~~~~~~~~~~~~~y~~-~G~~ 72 (399)
T PRK07681 3 YTLATRMKAFQSS--IFSELGAYKKEKI---AAGHKMIDLSIGNPD----MPPADFVREEMVHTANQKESYGYTL-SGIQ 72 (399)
T ss_pred ccHhHHHhhcCcc--HHHHHHHHHHHhh---hcCCCeEEeCCCCCC----CCCCHHHHHHHHHHHhccccCCCCC-CCcH
Confidence 4555555554554 3344333222111 346789999999875 5668889999988876544445664 7999
Q ss_pred HHHHHHHHHHhhhCCCCCCC-CcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCC
Q 014936 81 LTRRAIAEYLSRDLPYKLTP-NDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGW 159 (415)
Q Consensus 81 ~lr~~ia~~~~~~~~~~~~~-~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~ 159 (415)
+||++||+|+++.+|..+++ ++|++|+|+++++..++.+++++||+|++++|+|+.+...++..|++++.++++++++|
T Consensus 73 ~lr~aia~~~~~~~g~~~~~~~~I~it~G~~~al~~~~~~~~~~Gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~ 152 (399)
T PRK07681 73 EFHEAVTEYYNNTHNVILNADKEVLLLMGSQDGLVHLPMVYANPGDIILVPDPGYTAYETGIQMAGATSYYMPLKKENDF 152 (399)
T ss_pred HHHHHHHHHHHHHhCCCCCCCCeEEECCCcHHHHHHHHHHhCCCCCEEEECCCCccchHHHHHhcCCEEEEEecCCCCCC
Confidence 99999999999888988998 89999999999999999999999999999999999999999999999999998776678
Q ss_pred CCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCC-CCCeE
Q 014936 160 EVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS-TVPIL 238 (415)
Q Consensus 160 ~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~-~~~~i 238 (415)
.+|++++++.+.++++++++++||||||.+++.+++++|+++|+++|+++|+||+|.++.+++....++..+.. .+++|
T Consensus 153 ~~d~~~l~~~~~~~~k~v~l~~P~NPTG~~~s~~~~~~i~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~~~i 232 (399)
T PRK07681 153 LPDLELIPEEIADKAKMMILNFPGNPVPAMAHEDFFKEVIAFAKKHNIIVVHDFAYAEFYFDGNKPISFLSVPGAKEVGV 232 (399)
T ss_pred cCCHHHHHHhccccceEEEEeCCCCCcCcCCCHHHHHHHHHHHHHcCeEEEEeccchhheeCCCCCCChhhCCCCcccEE
Confidence 89999999888778999999999999999999999999999999999999999999999887655445544443 35789
Q ss_pred EEccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhhcc-ccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHH
Q 014936 239 TLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFD-ILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVD 317 (415)
Q Consensus 239 ~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~ 317 (415)
+++||||.|+++|+|+||+++++ ++++.+..... ...+++.+.|.++..+|++. ..++++.++.++++++
T Consensus 233 ~~~S~SK~~~~~GlRiG~~i~~~--------~l~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~-~~~~~~~~~~~~~~~~ 303 (399)
T PRK07681 233 EINSLSKSYSLAGSRIGYMIGNE--------EIVRALTQFKSNTDYGVFLPIQKAACAALRNG-AAFCEKNRGIYQERRD 303 (399)
T ss_pred EEeecccccCCccceeEEEecCH--------HHHHHHHHHHhhcccCCCHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHH
Confidence 99999999999999999999864 67888876643 34678888999999999764 4788888999999999
Q ss_pred HHHHHhhcCCCCcCCCCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCC--CCeEEEEeeCChhhHH
Q 014936 318 ICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGL--KNWLRVTFAVDPYSLE 395 (415)
Q Consensus 318 ~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~--~~~iRi~~~~~~~~l~ 395 (415)
.+.+.|+++ ++. +..|.+|+|+|++++.. .++.++...+++++||.+.||..|+. ++++||+++.++++++
T Consensus 304 ~l~~~L~~~-g~~-~~~p~~g~f~~~~l~~~-----~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRis~~~~~~~~~ 376 (399)
T PRK07681 304 TLVDGFRTF-GWN-VDKPAGSMFVWAEIPKG-----WTSLSFAYALMDRANVVVTPGHAFGPHGEGFVRIALVQDEEVLQ 376 (399)
T ss_pred HHHHHHHHC-CCc-ccCCCeeeEEEEECCCC-----CCHHHHHHHHHHhCCEEEeCChhhCcCCCCeEEEEecCCHHHHH
Confidence 999999988 777 54789999999998742 25678888888878999999998875 4799999998889999
Q ss_pred HHHHHHHHH
Q 014936 396 ECLDRIKSF 404 (415)
Q Consensus 396 ~~l~~l~~~ 404 (415)
+++++|+++
T Consensus 377 ~~l~~l~~~ 385 (399)
T PRK07681 377 QAVENIRNS 385 (399)
T ss_pred HHHHHHHHh
Confidence 999999883
No 11
>TIGR01264 tyr_amTase_E tyrosine aminotransferase, eukaryotic. This model describes tyrosine aminotransferase as found in animals and Trypanosoma cruzi. It is the first enzyme of a pathway of tyrosine degradation via homogentisate. Several plant enzyme designated as probable tyrosine aminotransferases are very closely related to an experimentally demonstrated nicotianamine aminotransferase, an enzyme in a siderophore (iron uptake chelator) biosynthesis pathway. These plant sequences are excluded from the model seed and score between the trusted an noise cutoffs.
Probab=100.00 E-value=1.5e-53 Score=404.75 Aligned_cols=370 Identities=40% Similarity=0.762 Sum_probs=311.6
Q ss_pred CcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHH
Q 014936 34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAI 113 (415)
Q Consensus 34 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al 113 (415)
++++++|+.|.|+...++++++.+.+++.+.+.......|++..|.++||+++++++.+ .+..+++++|++|+|+++++
T Consensus 30 ~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~aia~~~~~-~~~~~~~~~i~~t~G~~~al 108 (401)
T TIGR01264 30 EKPMIKLSIGDPTVFGNLPTDPEVMQAMKDSLDSGKYNGYAPTVGALSAREAIASYYHN-PDGPIEADDVVLCSGCSHAI 108 (401)
T ss_pred CCCeeecCCCCCCCcCCCCCCHHHHHHHHHHHhccCCCCCCCCCCCHHHHHHHHHHHhh-cCCCCCHHHEEECcChHHHH
Confidence 57889999999864334778899999999987765556798889999999999999986 35568899999999999999
Q ss_pred HHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHH
Q 014936 114 DVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQ 193 (415)
Q Consensus 114 ~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~ 193 (415)
.+++.+++++||+|++++|+|..+...++..|+++..++.+.++++++|++.+++.++++++++++++|+||||.+++.+
T Consensus 109 ~~~~~~l~~~gd~v~i~~P~y~~~~~~~~~~g~~v~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~~~~p~NPtG~~~~~~ 188 (401)
T TIGR01264 109 EMCIAALANAGQNILVPRPGFPLYETLAESMGIEVKLYNLLPDKSWEIDLKQLESLIDEKTAALIVNNPSNPCGSVFSRQ 188 (401)
T ss_pred HHHHHHhCCCCCEEEEeCCCChhHHHHHHHcCCEEEEeecCCccCCCCCHHHHHHHhccCceEEEEcCCCCCCCCCCCHH
Confidence 99999999999999999999999999999999999999886666788999999998888889999999999999999999
Q ss_pred HHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHH
Q 014936 194 HLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVE 273 (415)
Q Consensus 194 ~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~ 273 (415)
++++|+++|+++|+++|+||+|.++.+++....++..+....++|+++||||.|+++|+|+||++++++.... .++++
T Consensus 189 ~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~~~GlRiG~iv~~~~~~~~--~~~~~ 266 (401)
T TIGR01264 189 HLEEILAVAERQCLPIIADEIYGDMVFSGATFEPLASLSSTVPILSCGGLAKRWLVPGWRLGWIIIHDRRGIL--RDIRD 266 (401)
T ss_pred HHHHHHHHHHHCCCEEEEEhhhhhhccCCcccccHHHcCCCCcEEEEccCcccCCCccceEEEEEecCcchhH--HHHHH
Confidence 9999999999999999999999999887655555556655456999999999999999999999987522110 12444
Q ss_pred HHHhhccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCccccCCC
Q 014936 274 RMKKYFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLDDI 353 (415)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~~~~ 353 (415)
.++.......+++++.|.++..+|.+..++++++.++.++++++.+.+.|++++++. +..|.+|+|+|++++....++.
T Consensus 267 ~~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~l~~~~~~~~~~r~~l~~~L~~~~~~~-~~~p~~g~f~~~~~~~~~~~~~ 345 (401)
T TIGR01264 267 GLVKLSQRILGPCTIVQGALPSILLRTPQEYFDGTLSVLESNAMLCYGALAAVPGLR-PVMPSGAMYMMVGIEMEHFPEF 345 (401)
T ss_pred HHHHHhhccCCCCcHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHhCCCCc-ccCCCeeeEEEEEecccccCCC
Confidence 444443223567889999999999764468899999999999999999999987776 4579999999999864211222
Q ss_pred CCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEeeCChhhHHHHHHHHHHHHHH
Q 014936 354 IDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFAVDPYSLEECLDRIKSFYQR 407 (415)
Q Consensus 354 ~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~~~l~~~l~~l~~~~~~ 407 (415)
.++.+++..+++++||.+.||+.|+.++++||+++.+++++++++++|.+++++
T Consensus 346 ~~~~~~~~~l~~~~gI~v~pg~~f~~~~~iRis~~~~~~~l~~~l~rl~~~~~~ 399 (401)
T TIGR01264 346 KNDVEFTERLVAEQSVFCLPGSCFEYPGFFRVVLTVPVVMMEEACSRIQEFCER 399 (401)
T ss_pred CCHHHHHHHHHHhCCEEEeCchhcCCCCeEEEEEcCCHHHHHHHHHHHHHHHhc
Confidence 246778888877889999999999878999999998899999999999998864
No 12
>PRK07366 succinyldiaminopimelate transaminase; Validated
Probab=100.00 E-value=9.7e-54 Score=404.48 Aligned_cols=353 Identities=21% Similarity=0.324 Sum_probs=296.5
Q ss_pred cCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCC-cEEEeCChHH
Q 014936 33 NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPN-DVFVTSGCTQ 111 (415)
Q Consensus 33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~-~i~i~~g~~~ 111 (415)
.+.++++|+.|+|. +++++.+.+++.+.+.......|+++.|.++||+++|+|+.+.+|.+++++ +|++|+|+++
T Consensus 28 ~~~~~i~l~~~~~~----~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~I~it~Gs~~ 103 (388)
T PRK07366 28 AGKELIDLSLGSSD----LPAPAHALEAIAQSLHDPSTHGYLLFHGTLDFREAAAQWYEQRFGLAVDPETEVLPLIGSQE 103 (388)
T ss_pred cCCCeEEeCCCCCC----CCCCHHHHHHHHHHHhCcccCCCCCCCCCHHHHHHHHHHHHHhhCCcCCCcCeEEECCCcHH
Confidence 46789999999975 667889999999887654456799889999999999999998889889998 6999999999
Q ss_pred HHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCC
Q 014936 112 AIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYS 191 (415)
Q Consensus 112 al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~ 191 (415)
++..++.+++++||+|++++|+|+.+...++..|++++.++.++++++.+|++++++.+.++++++++++||||||.+++
T Consensus 104 al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~~~k~i~l~~p~NPTG~~~s 183 (388)
T PRK07366 104 GTAHLPLAVLNPGDFALLLDPGYPSHAGGVYLAGGQIYPMPLRAENDFLPVFADIPTEVLAQARLMVLSYPHNPTTAIAP 183 (388)
T ss_pred HHHHHHHHhCCCCCEEEEcCCCCcchHHHHHhcCCEEEEEECCCccCCCCCHHHHHHhhcccceEEEEeCCCCCCCccCC
Confidence 99999999999999999999999999999999999999999877667888999998877778899999999999999999
Q ss_pred HHHHHHHHHHHhhcCcEEEEccccCCcccCCCC-cccccccCCC-CCeEEEccCccccCCCCceEEEEEeeCCCCCCChH
Q 014936 192 YQHLQKLAETANKLKTLVIADEVYGHLVFGDKP-FVPMGVFGST-VPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKP 269 (415)
Q Consensus 192 ~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~-~~~~~~~~~~-~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~ 269 (415)
.+++++|+++|+++|++||+||+|.++.+++.. ..++..++.. +++|+++||||.|+++|+|+||+++++
T Consensus 184 ~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~g~~GlRiG~~v~~~-------- 255 (388)
T PRK07366 184 LSFFQEAVAFCQQHDLVLVHDFPYVDLVFDGEVEPPSILQADPEKSVSIEFFTLSKSYNMGGFRIGFAIGNA-------- 255 (388)
T ss_pred HHHHHHHHHHHHHcCeEEEEecchhhcccCCCCCCCChhhCCCCcccEEEEeecccccCCcchhheehcCCH--------
Confidence 999999999999999999999999999887643 3445454433 468999999999999999999999864
Q ss_pred HHHHHHHhhccc-cCCc-hhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCc
Q 014936 270 KVVERMKKYFDI-LGDP-ATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNL 347 (415)
Q Consensus 270 ~~~~~~~~~~~~-~~~~-~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~ 347 (415)
++++.+...... ..+. +...+.++ ..+.. .++++++.++.++++++.+.+.|+++ ++. +..|.+|+|+|++++.
T Consensus 256 ~li~~l~~~~~~~~~~~~~~~~~~a~-~~l~~-~~~~l~~~~~~~~~~r~~l~~~L~~~-~~~-~~~p~~g~f~~~~~~~ 331 (388)
T PRK07366 256 QLIQALRQVKAVVDFNQYRGILNGAI-AALTG-PQATVQQTVQIFRQRRDAFINALHQI-GWP-VPLPEATMYVWAKLPE 331 (388)
T ss_pred HHHHHHHHHHhhcccCCCHHHHHHHH-HHHhC-cHHHHHHHHHHHHHHHHHHHHHHHHC-CCc-ccCCCeeEEEEEECCc
Confidence 688888766432 2233 33344444 44432 25789999999999999999999988 676 4479999999999874
Q ss_pred cccCCCCCHHHHHHHHHhhcCeEEEcCCCCCC--CCeEEEEeeCChhhHHHHHHHHHHH
Q 014936 348 SLLDDIIDDIDFCFKLAKEESVIILPGTAVGL--KNWLRVTFAVDPYSLEECLDRIKSF 404 (415)
Q Consensus 348 ~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~--~~~iRi~~~~~~~~l~~~l~~l~~~ 404 (415)
.. ..++.+++..+++++||.+.||+.|+. .+++||+++.+++++++++++|.++
T Consensus 332 ~~---~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~~~~~~l~~~l~rl~~~ 387 (388)
T PRK07366 332 PW---QGNSVEFCTQLVAQTGVAASPGSGFGKSGEGYVRFALVHDPDILEEAVERIAAF 387 (388)
T ss_pred cc---CCCHHHHHHHHHHhCCEEEeCchHhCcCCCCeEEEEecCCHHHHHHHHHHHHHh
Confidence 21 013567778887888999999998875 5899999988899999999999875
No 13
>PRK06207 aspartate aminotransferase; Provisional
Probab=100.00 E-value=3.2e-53 Score=401.61 Aligned_cols=359 Identities=20% Similarity=0.297 Sum_probs=306.0
Q ss_pred CcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCC-CcEEEeCChHHH
Q 014936 34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTP-NDVFVTSGCTQA 112 (415)
Q Consensus 34 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~-~~i~i~~g~~~a 112 (415)
+.+.++|+.|+|+. +++++.+.+++.+.+.......|+++.|.++||++|++++++.+|..+++ ++|++|+|++++
T Consensus 38 ~~~~i~l~~g~~~~---~~p~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~l~~~~g~~~~~~~~I~it~Ga~~a 114 (405)
T PRK06207 38 PGRPVDFSHGDVDA---HEPTPGAFELFSAGVERGGVQAYTEYRGDADIRELLAARLAAFTGAPVDAADELIITPGTQGA 114 (405)
T ss_pred CCCceecCCcCCCC---CCCCHHHHHHHHHHHhcCCCccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCEEEeCCcHHH
Confidence 56789999999762 35667888888888766545689998999999999999999988988888 899999999999
Q ss_pred HHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeecc---CCCCCCCChhHHHhhcCCCceEEEecCCCCccccC
Q 014936 113 IDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLL---PDKGWEVDLDDIESLADQNTVALVIINPGNPCGNV 189 (415)
Q Consensus 113 l~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~---~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~ 189 (415)
+..++.+++++||+|++++|+|+.+...++..|.+++.++.+ +++++.+|++.|+++++++++++++++||||||.+
T Consensus 115 l~~~~~~l~~~Gd~Vlv~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~d~~~l~~~~~~~~k~v~l~~P~NPTG~~ 194 (405)
T PRK06207 115 LFLAVAATVARGDKVAIVQPDYFANRKLVEFFEGEMVPVQLDYLSADKRAGLDLDQLEEAFKAGVRVFLFSNPNNPAGVV 194 (405)
T ss_pred HHHHHHHhcCCCCEEEEeCCCchhHHHHHHHcCCEEEEEeccccCcccCCCcCHHHHHHhhhhcCeEEEECCCCCCCCcC
Confidence 999999999999999999999999999999999999998875 23467899999999988889999999999999999
Q ss_pred CCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCC-CCCeEEEccCccccCCCCceEEEEEeeCCCCCCCh
Q 014936 190 YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS-TVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRK 268 (415)
Q Consensus 190 ~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~ 268 (415)
++.+++++|+++|+++|+++|+||+|..+.+++....++..+.. .+++++++||||.|+++|+|+||+++++
T Consensus 195 ~s~e~l~~l~~~a~~~~~~iI~De~Y~~~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~lpGlRiG~ii~~~------- 267 (405)
T PRK06207 195 YSAEEIAQIAALARRYGATVIVDQLYSRLLYDGTSYTHLRALPIDPENVITIMGPSKTESLSGYRLGVAFGSP------- 267 (405)
T ss_pred CCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCchhcCCCCcCcEEEEecchhhccCcccceEEEEcCH-------
Confidence 99999999999999999999999999999987755444444432 4689999999999999999999999865
Q ss_pred HHHHHHHHhhcc-ccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCc
Q 014936 269 PKVVERMKKYFD-ILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNL 347 (415)
Q Consensus 269 ~~~~~~~~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~ 347 (415)
++++.+..... ...+.+.+.|.++..+|++. ..+++++.+.++++++.+.+.|++++++. +..|.+|+|+|++++.
T Consensus 268 -~l~~~~~~~~~~~~~~~~~~~q~a~~~~l~~~-~~~~~~~~~~~~~~r~~l~~~L~~~~~~~-~~~p~gg~fl~~~l~~ 344 (405)
T PRK06207 268 -AIIDRMEKLQAIVSLRAAGYSQAVLRTWFSEP-DGWMKDRIARHQAIRDDLLRVLRGVEGVF-VRAPQAGSYLFPRLPR 344 (405)
T ss_pred -HHHHHHHHHHhHhccCCCHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHHHHhcCCCce-ecCCCeeEEEEEeCcc
Confidence 67787776643 33456778999999999753 35678888888999999999998887777 5478899999999974
Q ss_pred cccCCCCCHHHHHHHHHhhcCeEEEcCCCCCC--CCeEEEEeeCChhhHHHHHHHHHHHHHHHH
Q 014936 348 SLLDDIIDDIDFCFKLAKEESVIILPGTAVGL--KNWLRVTFAVDPYSLEECLDRIKSFYQRHA 409 (415)
Q Consensus 348 ~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~--~~~iRi~~~~~~~~l~~~l~~l~~~~~~~~ 409 (415)
.. .+..++...+++++||.+.||..|+. ++++||+++.+++++++++++|.+++++++
T Consensus 345 ~~----~~~~~~~~~l~~~~gV~v~pG~~F~~~~~~~~Ris~~~~~~~l~~al~rl~~~l~~~~ 404 (405)
T PRK06207 345 LA----VSLHDFVKILRLQAGVIVTPGTEFSPHTADSIRLNFSQDHAAAVAAAERIAQLIERYR 404 (405)
T ss_pred cC----CCHHHHHHHHHHhcCEEEeCchHhCCCCCCeEEEEecCCHHHHHHHHHHHHHHHHHhh
Confidence 21 14677888877778999999998864 689999998889999999999999987653
No 14
>PLN00175 aminotransferase family protein; Provisional
Probab=100.00 E-value=2.4e-53 Score=402.79 Aligned_cols=352 Identities=27% Similarity=0.444 Sum_probs=304.7
Q ss_pred CcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCC-cEEEeCChHHH
Q 014936 34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPN-DVFVTSGCTQA 112 (415)
Q Consensus 34 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~-~i~i~~g~~~a 112 (415)
+.++++|+.|.|+ +++++.+++++.+.+... ...|+++.|.++||+++++++++.+|..++++ +|++|+|++++
T Consensus 53 ~~~~i~l~~G~P~----~~~~~~~~~~~~~~~~~~-~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~~I~vt~G~~~a 127 (413)
T PLN00175 53 KHGAINLGQGFPN----FDGPDFVKEAAIQAIRDG-KNQYARGFGVPELNSAIAERFKKDTGLVVDPEKEVTVTSGCTEA 127 (413)
T ss_pred cCCeEecCCCCCC----CCCCHHHHHHHHHHHhcC-CCCcCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCEEEeCCHHHH
Confidence 4578999999986 566788999999888763 45899999999999999999998888888887 79999999999
Q ss_pred HHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCH
Q 014936 113 IDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSY 192 (415)
Q Consensus 113 l~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~ 192 (415)
+..++.+++++||+|++++|+|..+...++..|++++.++.++++ +.+|++.|++.+.++++++++++||||||.++|.
T Consensus 128 l~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~-~~~~~~~l~~~~~~~~k~i~i~~p~NPtG~~~s~ 206 (413)
T PLN00175 128 IAATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKTVTLRPPD-FAVPEDELKAAFTSKTRAILINTPHNPTGKMFTR 206 (413)
T ss_pred HHHHHHHhCCCCCEEEEeCCCchhHHHHHHHcCCEEEEEECCccc-CCCCHHHHHHhcCcCceEEEecCCCCCCCcCCCH
Confidence 999999999999999999999999999999999999999986543 7899999999998889999999999999999999
Q ss_pred HHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCC-CCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHH
Q 014936 193 QHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS-TVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKV 271 (415)
Q Consensus 193 ~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~ 271 (415)
+++++|+++|+++++++|+||+|..+.+++. ..++..+.. .+++|+++||||.|+++|+|+||+++++ ++
T Consensus 207 ~~l~~l~~~a~~~~~~ii~De~Y~~l~~~~~-~~s~~~~~~~~~~vi~i~SfSK~~~~~G~RiG~~v~~~--------~l 277 (413)
T PLN00175 207 EELELIASLCKENDVLAFTDEVYDKLAFEGD-HISMASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPP--------HL 277 (413)
T ss_pred HHHHHHHHHHHHcCcEEEEecccCccccCCc-ccChhhCCCCcCcEEEEecchhhccCcchheeeeEeCH--------HH
Confidence 9999999999999999999999999988653 334444433 4689999999999999999999999865 67
Q ss_pred HHHHHhhcc-ccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCcccc
Q 014936 272 VERMKKYFD-ILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLL 350 (415)
Q Consensus 272 ~~~~~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~ 350 (415)
++.+..... ...+++.+.|.++..+|+.. +.++++.++.++++++.+.+.|++. ++. +..|.+|+|+|++++..
T Consensus 278 ~~~l~~~~~~~~~~~s~~~Q~a~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~p~g~~f~~~~~~~~-- 352 (413)
T PLN00175 278 TWGVRQAHSFLTFATATPMQWAAVAALRAP-ESYYEELKRDYSAKKDILVEGLKEV-GFK-VYPSSGTYFVMVDHTPF-- 352 (413)
T ss_pred HHHHHHHHhhccCCCCHHHHHHHHHHHhCC-HHHHHHHHHHHHHHHHHHHHHHHHC-CCe-ecCCCeeEEEEEecccc--
Confidence 777776643 35678889999999999764 5788999999999999999999987 677 55788999999987431
Q ss_pred CCCCCHHHHHHHHHhhcCeEEEcCCCCCC-----CCeEEEEeeCChhhHHHHHHHHHHHHH
Q 014936 351 DDIIDDIDFCFKLAKEESVIILPGTAVGL-----KNWLRVTFAVDPYSLEECLDRIKSFYQ 406 (415)
Q Consensus 351 ~~~~~~~~~~~~ll~~~gi~v~~g~~~~~-----~~~iRi~~~~~~~~l~~~l~~l~~~~~ 406 (415)
+..++.+++..+++++||.+.||+.|+. .+++||+++.+++++++++++|.++++
T Consensus 353 -~~~~~~~~~~~ll~~~gV~v~pg~~F~~~~~~~~~~iRls~~~~~e~l~~~~~rL~~~~~ 412 (413)
T PLN00175 353 -GFENDIAFCEYLIEEVGVAAIPPSVFYLNPEDGKNLVRFAFCKDEETLRAAVERMKTKLK 412 (413)
T ss_pred -CCCCHHHHHHHHHHhCCEEEeCchHhCCCCCCCCCEEEEEEcCCHHHHHHHHHHHHHHHh
Confidence 1124678888888888999999998852 469999999899999999999998775
No 15
>PRK06855 aminotransferase; Validated
Probab=100.00 E-value=6.6e-53 Score=402.21 Aligned_cols=373 Identities=25% Similarity=0.397 Sum_probs=304.9
Q ss_pred cCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHH
Q 014936 33 NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQA 112 (415)
Q Consensus 33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~a 112 (415)
.+.++++++.|+|... ++++++.+.+++.+.+.......|++..|.++||+++++|+++.+|+.+++++|++|+|++++
T Consensus 30 ~g~~~~~~~~G~p~~~-~~~~p~~~~~a~~~~~~~~~~~~Y~~~~G~~~LReaia~~~~~~~g~~~~~~~I~it~G~~~a 108 (433)
T PRK06855 30 LGVKITWENIGDPIAK-GEKIPDWMKEIVAELVMDDKSYGYCPTKGVLETREFLAELNNKRGGAQITPDDIIFFNGLGDA 108 (433)
T ss_pred ccccccccccCCCccc-CCCCCHHHHHHHHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHhccCCCCCHhHEEEcCcHHHH
Confidence 4678999999998543 478899999999988765555689999999999999999999988989999999999999999
Q ss_pred HHHHHHHhcCCCCEEEEcCCCCcchHHHH-HhCCCeEEEeeccCCCCCCCChhHHHhhcC--CCceEEEecCCCCccccC
Q 014936 113 IDVAMALLSRPGANILLPRPGFPIYELSA-AFRHIEVRHFDLLPDKGWEVDLDDIESLAD--QNTVALVIINPGNPCGNV 189 (415)
Q Consensus 113 l~~~~~~l~~~gd~vi~~~p~y~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~v~i~~p~nptG~~ 189 (415)
+..++. ++++||.|++++|+|+.+.... ...|++++.++.+++++|.+|+++|+++++ ++++++++++||||||.+
T Consensus 109 l~~~~~-l~~~Gd~Vlv~~P~Y~~~~~~~~~~~g~~~v~v~~~~~~~~~~d~~~l~~~~~~~~~~~~i~l~~P~NPTG~~ 187 (433)
T PRK06855 109 IAKIYG-LLRREARVIGPSPAYSTHSSAEAAHAGYPPVTYRLDPENNWYPDLDDLENKVKYNPSIAGILLINPDNPTGAV 187 (433)
T ss_pred HHHHHH-hcCCCCeEEEeCCCCchHHHHHHHhcCCeEEEEecccccCCCCCHHHHHHHHhcCCCceEEEEECCCCCCCcC
Confidence 999985 7799999999999999876543 456888888888766778899999999886 357889999999999999
Q ss_pred CCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChH
Q 014936 190 YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKP 269 (415)
Q Consensus 190 ~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~ 269 (415)
+|.+++++|+++|+++|++||+||+|..+.|.+....++..+..+.++|+++||||.|++||+|+||+++++......-.
T Consensus 188 ~s~~~~~~l~~~a~~~~~~II~De~Y~~l~~~~~~~~sl~~~~~~~~~I~~~S~SK~~~~pGlRiG~ii~p~~~~~~~~~ 267 (433)
T PRK06855 188 YPKEILREIVDIAREYDLFIICDEIYNNIVYNGKKTVPLSEVIGDVPGIALKGISKELPWPGSRCGWIEVYNADKDEVFK 267 (433)
T ss_pred CCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCCHHHHcCcCCeEEEecCccccCCCcceEEEEEEeCCchhhHHH
Confidence 99999999999999999999999999999987655556655544446899999999999999999999985311000000
Q ss_pred HHHHHHHhhccccCCchhHHHHHHHHhhCCCc-HHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCcc
Q 014936 270 KVVERMKKYFDILGDPATFIQAAVPSILQQPD-EVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLS 348 (415)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~-~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~ 348 (415)
.+.+.+........+++.+.|.++..++++.. +.++++.++.++++++.+.+.|++++++. +..|.+|+|+|++++..
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~L~~~~~~~-~~~p~gg~~~w~~l~~~ 346 (433)
T PRK06855 268 KYINSILNAKMIEVCSTTLPQMAIPRIMSHPEYKNYLKERNKRYEKRSNIAYEKLKDVPGLK-VNRTNGAFYMTVVFEDG 346 (433)
T ss_pred HHHHHHHHhhccccCCChHHHHHHHHhhcCCcHHHHHHHHHHHHHHHHHHHHHHHhcCCCee-ccCCCeeEEEeeccccc
Confidence 23344433322234577899999999998654 67899999999999999999999887777 55899999999999753
Q ss_pred cc--------C-------------C-CCCHHHHHHHHHhhcCeEEEcCCCCCC-CCeEEEEee-CChhhHHHHHHHHHHH
Q 014936 349 LL--------D-------------D-IIDDIDFCFKLAKEESVIILPGTAVGL-KNWLRVTFA-VDPYSLEECLDRIKSF 404 (415)
Q Consensus 349 ~~--------~-------------~-~~~~~~~~~~ll~~~gi~v~~g~~~~~-~~~iRi~~~-~~~~~l~~~l~~l~~~ 404 (415)
.. . + ..++.+++..+++++||.+.||+.|+. ..++||+++ .++++|++++++|+++
T Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~PG~~F~~~~~~~Rls~~~~~~~~i~~~~~~l~~~ 426 (433)
T PRK06855 347 VLNNKQSLPIENPEVKEYVEGLVKGPVSPDKRFVYYLLASTGICVVPLSSFCTELNGFRVTLLERDEEKFEWIYQTLAEK 426 (433)
T ss_pred cccccccCCcchhhhHHHHHHHHhcCCCchHHHHHHHHHHcCEEEecCCcCCCCCCceEEEECCCcHHHHHHHHHHHHHH
Confidence 10 0 0 013667888888899999999999975 357999997 5899999999999999
Q ss_pred HHHH
Q 014936 405 YQRH 408 (415)
Q Consensus 405 ~~~~ 408 (415)
+++.
T Consensus 427 ~~~~ 430 (433)
T PRK06855 427 IEEY 430 (433)
T ss_pred HHHH
Confidence 9764
No 16
>PRK08960 hypothetical protein; Provisional
Probab=100.00 E-value=1.1e-52 Score=397.03 Aligned_cols=378 Identities=23% Similarity=0.360 Sum_probs=315.5
Q ss_pred cccCCccCCcchhhHHHHHHHhhhcccccccCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHH
Q 014936 3 ISNGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLT 82 (415)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~l 82 (415)
++++.....++ .+..+.....+.. ..+.++++|+.|.|+ +++++.+.+++.+.+.... ..|++..|.+++
T Consensus 5 ~~~~~~~~~~~--~~~~~~~~~~~~~---~~~~~~i~l~~g~~~----~~~~~~v~~a~~~~~~~~~-~~Y~~~~g~~~l 74 (387)
T PRK08960 5 YSRRSRDIEPF--HVMALLARANELE---AAGHDVIHLEIGEPD----FTTAEPIVAAGQAALAAGH-TRYTAARGLPAL 74 (387)
T ss_pred hhhHHHhCCch--HHHHHHHHHHHHH---hcCCCeEEeCCCCCC----CCCCHHHHHHHHHHHhcCC-CccCCCCCCHHH
Confidence 45555555555 4555555444333 236789999999975 6678999999999887543 478888999999
Q ss_pred HHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCC
Q 014936 83 RRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVD 162 (415)
Q Consensus 83 r~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 162 (415)
|+++|+++++.+|.++++++|++|+|+++++..++.+++++||+|++++|+|+.+...+...|.++..++++.++++.+|
T Consensus 75 r~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~~~~~gd~vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d 154 (387)
T PRK08960 75 REAIAGFYAQRYGVDVDPERILVTPGGSGALLLASSLLVDPGKHWLLADPGYPCNRHFLRLVEGAAQLVPVGPDSRYQLT 154 (387)
T ss_pred HHHHHHHHHHHhCCCCChhhEEEccCcHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhcCCeEEEEecCcccCCCCC
Confidence 99999999988888899999999999999999999999999999999999999999999999999999998766678899
Q ss_pred hhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEcc
Q 014936 163 LDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGS 242 (415)
Q Consensus 163 ~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s 242 (415)
++.+++.++++++++++++||||||.++|.+++++|+++|+++|+++|+||+|.++.+++. ..++... .+++++++|
T Consensus 155 ~~~l~~~~~~~~~~i~i~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~Y~~~~~~~~-~~~~~~~--~~~vi~~~S 231 (387)
T PRK08960 155 PALVERHWNADTVGALVASPANPTGTLLSRDELAALSQALRARGGHLVVDEIYHGLTYGVD-AASVLEV--DDDAFVLNS 231 (387)
T ss_pred HHHHHHHhCccceEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCCEEEEEccccccccCCC-CCChhhc--cCCEEEEee
Confidence 9999999988889999999999999999999999999999999999999999999887543 2233332 457999999
Q ss_pred CccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhhcc-ccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHH
Q 014936 243 LSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFD-ILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYN 321 (415)
Q Consensus 243 ~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~ 321 (415)
|||.|+++|+|+||+++++ ++++.+..... ...+++.+.|.++..++.+..+.++++.++.++++++.+.+
T Consensus 232 ~SK~~g~~GlRiG~~~~~~--------~~~~~~~~~~~~~~~~~s~~~q~a~~~~l~~~~~~~l~~~~~~~~~~~~~l~~ 303 (387)
T PRK08960 232 FSKYFGMTGWRLGWLVAPP--------AAVPELEKLAQNLYISASTPAQHAALACFEPETLAILEARRAEFARRRDFLLP 303 (387)
T ss_pred cccccCCcccEEEEEEcCH--------HHHHHHHHHHhhhccCCCHHHHHHHHHHhhcCcHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999975 67777776533 34567889999998888754457889999999999999999
Q ss_pred HhhcCCCCcCCCCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCC---CCeEEEEeeCChhhHHHHH
Q 014936 322 KIKEIPCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGL---KNWLRVTFAVDPYSLEECL 398 (415)
Q Consensus 322 ~l~~~~~~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~---~~~iRi~~~~~~~~l~~~l 398 (415)
.|+++ ++.++..|.+|+|+|++++... .++.+++.++++++||.+.||+.|+. .+++|++++.+.+++++++
T Consensus 304 ~L~~~-~~~~~~~p~g~~f~~~~~~~~~----~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~~iRi~~~~~~~~l~~al 378 (387)
T PRK08960 304 ALREL-GFGIAVEPQGAFYLYADISAFG----GDAFAFCRHFLETEHVAFTPGLDFGRHQAGQHVRFAYTQSLPRLQEAV 378 (387)
T ss_pred HHHhc-CCcCCcCCCeeEEEEEeccccC----CCHHHHHHHHHHhCCEEEcCchHhCCCCCCCeEEEEecCCHHHHHHHH
Confidence 99987 6653346899999999986411 24677888888888999999999875 4699999988889999999
Q ss_pred HHHHHHHH
Q 014936 399 DRIKSFYQ 406 (415)
Q Consensus 399 ~~l~~~~~ 406 (415)
++|+++++
T Consensus 379 ~~l~~~~~ 386 (387)
T PRK08960 379 ERIARGLR 386 (387)
T ss_pred HHHHHHHh
Confidence 99988764
No 17
>PRK06107 aspartate aminotransferase; Provisional
Probab=100.00 E-value=8.1e-53 Score=399.33 Aligned_cols=388 Identities=22% Similarity=0.340 Sum_probs=321.0
Q ss_pred CccccCCccCCcchhhHHHHHHHhhhcccccccCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcH
Q 014936 1 MEISNGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLP 80 (415)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~ 80 (415)
|++++|+....++ ....+.+...+.. ..+.++++|+.|.|. +++++.+.+++.+.+... ...|+++.|.+
T Consensus 4 ~~~~~~~~~~~~~--~~~~~~~~~~~~~---~~~~~~i~l~~g~p~----~~~~~~~~~~~~~~~~~~-~~~Y~~~~G~~ 73 (402)
T PRK06107 4 FVPAARVSRIKPS--PSTAAAARARELR---AAGRSIVDLTVGEPD----FDTPDHIKQAAVAAIERG-ETKYTLVNGTP 73 (402)
T ss_pred hhhhHHhhhcCcc--HHHHHHHHHHHHH---hccCCEEEcCCCCCC----CCCCHHHHHHHHHHHHcC-CCCCCCCCCCH
Confidence 4566666554444 3233332222221 236788999999975 556788999999988653 35799999999
Q ss_pred HHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCC
Q 014936 81 LTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWE 160 (415)
Q Consensus 81 ~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~ 160 (415)
+||+++++++++.+|..+++++|++|+|+++++..++.+++++||+|++++|+|..|...+...+..+..++.+.++++.
T Consensus 74 ~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~~~~~gd~vl~~~p~y~~y~~~~~~~~~~~~~v~~~~~~~~~ 153 (402)
T PRK06107 74 ALRKAIIAKLERRNGLHYADNEITVGGGAKQAIFLALMATLEAGDEVIIPAPYWVSYPDMVLANDGTPVIVACPEEQGFK 153 (402)
T ss_pred HHHHHHHHHHHHhcCCCCChhhEEEeCCHHHHHHHHHHHhcCCCCEEEEecCCCcCHHHHHHHcCCEEEEecCCcccCCC
Confidence 99999999999888988899999999999999999999999999999999999999998888888888888876556678
Q ss_pred CChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhc-CcEEEEccccCCcccCCCCcccccccCC--CCCe
Q 014936 161 VDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKL-KTLVIADEVYGHLVFGDKPFVPMGVFGS--TVPI 237 (415)
Q Consensus 161 ~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~-~~~li~De~~~~~~~~~~~~~~~~~~~~--~~~~ 237 (415)
+|++.+++.++++++++++++|+||||.++|.+++++|+++|+++ ++++|+||+|+.+.+++....++..+.. .+++
T Consensus 154 ~~~~~l~~~~~~~~~~v~l~~p~NPtG~~~s~~~~~~l~~~a~~~~~~~iI~De~y~~l~~~~~~~~~~~~~~~~~~~~v 233 (402)
T PRK06107 154 LTPEALEAAITPRTRWLILNAPSNPTGAVYSRAELRALADVLLRHPHVLVLTDDIYDHIRFDDEPTPHLLAAAPELRDRV 233 (402)
T ss_pred CCHHHHHhhcCcCceEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCCeEEEEehhccccccCCCCCCCHHHhCcCccCCE
Confidence 999999999988899999999999999999999999999999998 9999999999998887655555554432 3589
Q ss_pred EEEccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhhcc-ccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHH
Q 014936 238 LTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFD-ILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSV 316 (415)
Q Consensus 238 i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~ 316 (415)
++++||||.|+++|+|+||+++++ ++++.+..... ...+++.+.|.++..+|... +.++++.++.+++++
T Consensus 234 i~~~S~SK~~~~pGlRiG~~~~~~--------~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~-~~~~~~~~~~~~~~~ 304 (402)
T PRK06107 234 LVTNGVSKTYAMTGWRIGYAAGPA--------DLIAAINKLQSQSSSCPSSISQAAAAAALNGD-QSFVTESVAVYKQRR 304 (402)
T ss_pred EEEeccchhhcCcccceeeeecCH--------HHHHHHHHHHHhcccCCChHHHHHHHHHhcCC-hHHHHHHHHHHHHHH
Confidence 999999999999999999999865 67887777643 35678999999999999743 578899999999999
Q ss_pred HHHHHHhhcCCCCcCCCCCCCceEEEEecCcc---c-cCC--CCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEeeCC
Q 014936 317 DICYNKIKEIPCISCPHKPEGSMAVMLKLNLS---L-LDD--IIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFAVD 390 (415)
Q Consensus 317 ~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~---~-~~~--~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~ 390 (415)
+.+.+.|++++++. +..|++|+|+|++++.. . ..+ ..++.+++..+++++||.+.||..|+..+++||+++.+
T Consensus 305 ~~~~~~L~~~~g~~-~~~p~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gv~v~pg~~Fg~~~~iRis~~~~ 383 (402)
T PRK06107 305 DYALALLNAIPGLS-CLVPDGAFYLYVNCAGLIGKTTPEGKVLETDQDVVLYLLDSAGVAVVQGTAYGLSPYFRLSIATS 383 (402)
T ss_pred HHHHHHHhcCCCCc-ccCCCcceEEeeecccccccccccccCCCCHHHHHHHHHHhCCEEEeCccccCCCCeEEEEeCCC
Confidence 99999999887777 55889999999987421 0 011 12467788888888999999999998889999999989
Q ss_pred hhhHHHHHHHHHHHHHHH
Q 014936 391 PYSLEECLDRIKSFYQRH 408 (415)
Q Consensus 391 ~~~l~~~l~~l~~~~~~~ 408 (415)
++++++++++|+++++++
T Consensus 384 ~e~l~~~l~~l~~~l~~~ 401 (402)
T PRK06107 384 LETLEEACARIERAVAAL 401 (402)
T ss_pred HHHHHHHHHHHHHHHHhc
Confidence 999999999999988764
No 18
>PRK08068 transaminase; Reviewed
Probab=100.00 E-value=1.2e-52 Score=397.02 Aligned_cols=378 Identities=22% Similarity=0.334 Sum_probs=309.4
Q ss_pred ccccCCccCCcchhhHHHHHHHhhhcccccccCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHH
Q 014936 2 EISNGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPL 81 (415)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~ 81 (415)
+++++...+.++ ....+...+.... ..+.++++|+.|+|+ +++++.+.+++.+.+.......|++..|.++
T Consensus 4 ~~~~~~~~~~~~--~~~~~~~~~~~~~---~~~~~~i~l~~~~p~----~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~ 74 (389)
T PRK08068 4 EPSELLKQLPKQ--FFASLVAKVNKKV---AEGHDVINLGQGNPD----QPTPEHIVEALQEAAENPANHKYSPFRGYPF 74 (389)
T ss_pred chhhHhhhcCcc--HHHHHHHHHHHHH---hcCCCeEEecCCCCC----CCCCHHHHHHHHHHHhCCCCCCCCCCCCCHH
Confidence 455565555555 3344433322221 346678999999875 4556788999988877655568988899999
Q ss_pred HHHHHHHHHhhhCCCCCCCC-cEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCC
Q 014936 82 TRRAIAEYLSRDLPYKLTPN-DVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWE 160 (415)
Q Consensus 82 lr~~ia~~~~~~~~~~~~~~-~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~ 160 (415)
||+++|+|+++.+|..++++ +|++|+|+++++..++.+++++||+|++++|+|..+...++..|+++..++++.++++.
T Consensus 75 lr~aia~~~~~~~g~~~~~~~~i~it~G~~~~l~~~~~~~~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~i~~~~~~~~~ 154 (389)
T PRK08068 75 LKEAAADFYKREYGVTLDPETEVAILFGGKAGLVELPQCLMNPGDTILVPDPGYPDYLSGVALARAQFETMPLIAENNFL 154 (389)
T ss_pred HHHHHHHHHHHHhCCCCCCCccEEEcCCcHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHHHhcCCEEEEeecccccCCC
Confidence 99999999998888888998 89999999999999999999999999999999999999999999999999987666788
Q ss_pred CChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccc-cccCCCCCeEE
Q 014936 161 VDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPM-GVFGSTVPILT 239 (415)
Q Consensus 161 ~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~-~~~~~~~~~i~ 239 (415)
+|++++++.++++++++++++||||||.++|.+++++|+++|+++|+++|+||+|..+.+++....++ ...+..+++++
T Consensus 155 ~d~~~l~~~~~~~~~~v~l~~P~NPTG~~~s~~~~~~l~~la~~~~~~ii~Deay~~~~~~~~~~~s~~~~~~~~~~~i~ 234 (389)
T PRK08068 155 PDYTKIPEEVAEKAKLMYLNYPNNPTGAVATKAFFEETVAFAKKHNIGVVHDFAYGAIGFDGQKPVSFLQTPGAKDVGIE 234 (389)
T ss_pred CCHHHHHHhccccceEEEEECCCCCCCCcCCHHHHHHHHHHHHHcCeEEEEehhhhhhccCCCCCcChhhCCCccCCEEE
Confidence 89999999887788999999999999999999999999999999999999999999988765333333 22333457899
Q ss_pred EccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhhcc-ccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHH
Q 014936 240 LGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFD-ILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDI 318 (415)
Q Consensus 240 ~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~ 318 (415)
++||||.|+++|+|+||+++++ ++++.+..... ...+.++..|.++..++... ..++++.++.++++++.
T Consensus 235 ~~S~SK~~g~~GlRiG~~~~~~--------~l~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~-~~~~~~~~~~~~~~r~~ 305 (389)
T PRK08068 235 LYTLSKTFNMAGWRVAFAVGNE--------SVIEAINLLQDHLFVSLFGAIQDAAIEALLSD-QSCVAELVARYESRRNA 305 (389)
T ss_pred EecchhccCCccceeEeEecCH--------HHHHHHHHHHhhccCCCChHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHH
Confidence 9999999999999999999854 68888776643 23345556788777777543 47889999999999999
Q ss_pred HHHHhhcCCCCcCCCCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCC--CCeEEEEeeCChhhHHH
Q 014936 319 CYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGL--KNWLRVTFAVDPYSLEE 396 (415)
Q Consensus 319 l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~--~~~iRi~~~~~~~~l~~ 396 (415)
+.+.|+++ ++. +..|.+|+|+|++++.. .++.++...+++++||.+.||..|+. ++++||+++.+++++++
T Consensus 306 ~~~~L~~~-g~~-~~~~~g~~~~~v~~~~~-----~~~~~~~~~l~~~~gi~v~pg~~f~~~~~~~iRi~~~~~~~~l~~ 378 (389)
T PRK08068 306 FISACREI-GWE-VDAPKGSFFAWMPVPKG-----YTSEQFADLLLEKAHVAVAPGNGFGEHGEGYVRVGLLTDEERLRE 378 (389)
T ss_pred HHHHHHHC-CCc-ccCCCeeEEEEEECCCC-----CCHHHHHHHHHHhCCEEEecchHhCccCCCeEEEEEcCCHHHHHH
Confidence 99999988 776 55788899999998642 25678888887778999999998875 57999999888889999
Q ss_pred HHHHHHHH
Q 014936 397 CLDRIKSF 404 (415)
Q Consensus 397 ~l~~l~~~ 404 (415)
++++|+++
T Consensus 379 al~~l~~~ 386 (389)
T PRK08068 379 AVERIGKL 386 (389)
T ss_pred HHHHHHHh
Confidence 99988753
No 19
>PRK09276 LL-diaminopimelate aminotransferase; Provisional
Probab=100.00 E-value=2.2e-52 Score=395.09 Aligned_cols=350 Identities=23% Similarity=0.396 Sum_probs=300.7
Q ss_pred CcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCC-cEEEeCChHHH
Q 014936 34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPN-DVFVTSGCTQA 112 (415)
Q Consensus 34 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~-~i~i~~g~~~a 112 (415)
+.++++|+.|+|+ +++++.+.+++.+.+.......|+++.|.++||+++++|+++.+|..++++ +|++|+|++++
T Consensus 30 ~~~~i~l~~~~~~----~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~ii~t~G~~~~ 105 (385)
T PRK09276 30 GVDVISLGIGDPD----LPTPDHIIEAMCKAVEDPENHQYPSYEGMLEFRKAVADWYKRRFGVELDPETEVISLIGSKEG 105 (385)
T ss_pred CCCEEEecCCCCC----CCCCHHHHHHHHHHHhCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEccCcHHH
Confidence 6778999999875 566788999999887654456899989999999999999998888878887 59999999999
Q ss_pred HHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCH
Q 014936 113 IDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSY 192 (415)
Q Consensus 113 l~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~ 192 (415)
+..++.+++++||+|++++|+|+.+...++..|.+++.++.+.++++.+|++++++.+.++++++++++||||||.+++.
T Consensus 106 i~~~~~~~~~~gd~Vl~~~P~y~~~~~~~~~~g~~~~~v~~~~~~g~~~d~~~l~~~~~~~~~~v~l~~p~NPtG~~~~~ 185 (385)
T PRK09276 106 IAHIPLAFVNPGDVVLVPDPGYPVYKIGTIFAGGEPYFMPLKEENGFLPDLDAIPEDVAKKAKLMFINYPNNPTGAVADL 185 (385)
T ss_pred HHHHHHHhCCCCCEEEEcCCCCcChHHHHHHcCCEEEEEecCCCCCCcCCHHHHHHhccccceEEEEeCCCCCCCCCCCH
Confidence 99999999999999999999999999999999999999998666677889999998888889999999999999999999
Q ss_pred HHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCC-CCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHH
Q 014936 193 QHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS-TVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKV 271 (415)
Q Consensus 193 ~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~ 271 (415)
+++++|+++|+++|+++|+||+|..+.+++....++..++. .+++|+++||||.|+++|+|+||+++++ ++
T Consensus 186 ~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~i~~~--------~l 257 (385)
T PRK09276 186 EFFEEVVDFAKKYDIIVCHDAAYSEIAYDGYKPPSFLEVPGAKDVGIEFHSLSKTYNMTGWRIGFAVGNA--------DL 257 (385)
T ss_pred HHHHHHHHHHHHCCcEEEEecchhheecCCCCCCChhccCCCcCCEEEEecchhhcCCcchhheeeeCCH--------HH
Confidence 99999999999999999999999998887655555555543 3578999999999999999999999865 67
Q ss_pred HHHHHhhcc-ccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCcccc
Q 014936 272 VERMKKYFD-ILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLL 350 (415)
Q Consensus 272 ~~~~~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~ 350 (415)
++.+..... ...+.+.+.|.++..+|.. .+.++++.++.++++++.+.+.|+++ ++. +..|.+|+|+|++++..
T Consensus 258 ~~~~~~~~~~~~~~~~~~~q~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~-~~~-~~~~~~~~~~~v~~~~~-- 332 (385)
T PRK09276 258 IAGLGKVKSNVDSGVFQAIQEAGIAALNG-PQEVVEELRKIYQERRDILVEGLRKL-GLE-VEPPKATFYVWAPVPKG-- 332 (385)
T ss_pred HHHHHHHHhhccCCCCHHHHHHHHHHHcC-cHHHHHHHHHHHHHHHHHHHHHHHhC-CCc-ccCCCcceEEEEECCCC--
Confidence 777776532 3345667788888888864 35788899999999999999999988 777 54788899999998742
Q ss_pred CCCCCHHHHHHHHHhhcCeEEEcCCCCCC--CCeEEEEeeCChhhHHHHHHHHHH
Q 014936 351 DDIIDDIDFCFKLAKEESVIILPGTAVGL--KNWLRVTFAVDPYSLEECLDRIKS 403 (415)
Q Consensus 351 ~~~~~~~~~~~~ll~~~gi~v~~g~~~~~--~~~iRi~~~~~~~~l~~~l~~l~~ 403 (415)
.+..++..++++++||.+.||..|+. ++++||+++.+++++.+++++|.+
T Consensus 333 ---~~~~~l~~~ll~~~gi~v~~g~~f~~~~~~~~Ris~~~~~~~l~~~l~~l~~ 384 (385)
T PRK09276 333 ---YTSAEFATLLLDKAGVVVTPGNGFGEYGEGYFRIALTVPDERIEEAVERIKK 384 (385)
T ss_pred ---CCHHHHHHHHHHhCCEEECCchhhCCCCCCeEEEEeCCCHHHHHHHHHHHhh
Confidence 25678888888788999999998875 479999999888999999998864
No 20
>TIGR03540 DapC_direct LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known aminotransferases, succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh). Although there is no experimental characterization of any of the sequences in this clade, a direct pathway is known in plants and Chlamydia, so it seems quite reasonable that these enzymes catalyze the same transformation.
Probab=100.00 E-value=2.8e-52 Score=394.07 Aligned_cols=351 Identities=25% Similarity=0.420 Sum_probs=302.6
Q ss_pred cCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCC-cEEEeCChHH
Q 014936 33 NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPN-DVFVTSGCTQ 111 (415)
Q Consensus 33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~-~i~i~~g~~~ 111 (415)
.++++++|+.|+|+ +++++.+.+++.+.+.......|+++.|.++||+++++|+++.+|..++++ +|++|+|+++
T Consensus 27 ~~~~~~~l~~~~~~----~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~~vi~t~G~~~ 102 (383)
T TIGR03540 27 EGVDVISLGIGDPD----LPTPKHIVEALCKAAENPENHRYPSYEGMLAYRQAVADWYKRRFGVELDPETEVLSLIGSKE 102 (383)
T ss_pred cCCCeEEeCCCCCC----CCCCHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHHhhCCCCCCCCeEEECCCcHH
Confidence 46789999999975 566788999998887655556899999999999999999998888777876 6999999999
Q ss_pred HHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCC
Q 014936 112 AIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYS 191 (415)
Q Consensus 112 al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~ 191 (415)
++..++.+++++||.|++++|+|+.+...++..|+++..++.+.++++.+|++++++.+.++++++++++||||||.+++
T Consensus 103 ~l~~~~~~~~~~gd~vlv~~P~y~~~~~~~~~~G~~v~~v~~~~~~g~~~d~~~l~~~~~~~~~~v~i~~P~NPtG~~~~ 182 (383)
T TIGR03540 103 GIAHIPLAFVNPGDIVLVPDPGYPVYRIGTLFAGGEPYEMPLKEENGFLPDFDAIPEDIAKKAKLMFINYPNNPTGAVAP 182 (383)
T ss_pred HHHHHHHHhCCCCCEEEEeCCCCcchHHHHHhcCCEEEEEecCcccCCccCHHHHHhhccccceEEEEeCCCCCcCccCC
Confidence 99999999999999999999999999999999999999999876667788999999988888999999999999999999
Q ss_pred HHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCC-CCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHH
Q 014936 192 YQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS-TVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPK 270 (415)
Q Consensus 192 ~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~ 270 (415)
.+++++|+++|+++|+++|+||+|.++.+.+....++..++. .+++|+++||||.|+++|+|+||+++++ +
T Consensus 183 ~~~~~~i~~~a~~~~~~ii~De~y~~l~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~g~~GlRiG~~i~~~--------~ 254 (383)
T TIGR03540 183 LKFFKELVEFAKEYNIIVCHDNAYSEITFDGYKAPSFLEVDGAKDVGIEFHSLSKTYNMTGWRIGMAVGNA--------D 254 (383)
T ss_pred HHHHHHHHHHHHHcCEEEEEecchhhhccCCCCCcCcccCCCcccCEEEEEecccccCCccceeeEEeCCH--------H
Confidence 999999999999999999999999998887655555555543 3578999999999999999999999864 6
Q ss_pred HHHHHHhhcc-ccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCccc
Q 014936 271 VVERMKKYFD-ILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSL 349 (415)
Q Consensus 271 ~~~~~~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~ 349 (415)
+++.+..... ...+++.+.|.++..+|.+. ..++++.++.++++++.+.+.|+++ ++. +..|.+|+|+|++++..
T Consensus 255 l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~L~~~-~~~-~~~~~~~~~~~~~l~~~- 330 (383)
T TIGR03540 255 LIAGLGKVKTNVDSGVFQAIQYAAIAALNGP-QDVVKEIRKIYQRRRDLLLEALKKI-GID-VEKPKATFYVWVPVPEG- 330 (383)
T ss_pred HHHHHHHHHHhcccCCChHHHHHHHHHHhCC-HHHHHHHHHHHHHHHHHHHHHHHhC-CCE-ecCCCcceEEEEECCCC-
Confidence 7777766543 23466778899999998764 6888899999999999999999998 777 54788899999998742
Q ss_pred cCCCCCHHHHHHHHHhhcCeEEEcCCCCCC--CCeEEEEeeCChhhHHHHHHHHHH
Q 014936 350 LDDIIDDIDFCFKLAKEESVIILPGTAVGL--KNWLRVTFAVDPYSLEECLDRIKS 403 (415)
Q Consensus 350 ~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~--~~~iRi~~~~~~~~l~~~l~~l~~ 403 (415)
.+..++...+++++||.+.||..|+. ++++||+++.+++++++++++|++
T Consensus 331 ----~~~~~~~~~ll~~~gi~v~~g~~f~~~~~~~~Ris~~~~~~~l~~~l~~l~~ 382 (383)
T TIGR03540 331 ----YTSAEFAARLLEETGVVVTPGVGFGEYGEGYIRISLTVPDERLEEAVARIKK 382 (383)
T ss_pred ----CCHHHHHHHHHHHCCEEEecchhhCccCCCeEEEEecCCHHHHHHHHHHHhh
Confidence 25678888888888999999998875 479999999888999999998864
No 21
>PRK09148 aminotransferase; Validated
Probab=100.00 E-value=8e-52 Score=392.34 Aligned_cols=390 Identities=20% Similarity=0.331 Sum_probs=314.4
Q ss_pred CccccCCccCCcchhhHHHHHHHhhhcccccccCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcH
Q 014936 1 MEISNGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLP 80 (415)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~ 80 (415)
|+-+.+..+..++ ....... ....++ ..++++++|+.|+|+ +++++.+++++.+.+.......|+++.|.+
T Consensus 1 ~~~~~~~~~~~~~--~~~~~~~-~~~~~~--~~~~~~i~l~~~~p~----~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~ 71 (405)
T PRK09148 1 MEEFHRIRRLPPY--VFEQVNR-LKAAAR--AAGADIIDLGMGNPD----LPTPQHIVDKLCETAQDPRTHRYSASKGIP 71 (405)
T ss_pred CcchhhhhcCCcc--HHHHHHH-HHHHHH--hcCCCeEEcCCCCCC----CCCCHHHHHHHHHHHcCcccCCCCCCCCCH
Confidence 5556666665554 2232222 222222 347789999999875 556788888888877554456899999999
Q ss_pred HHHHHHHHHHhhhCCCCCCCC-cEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCC
Q 014936 81 LTRRAIAEYLSRDLPYKLTPN-DVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGW 159 (415)
Q Consensus 81 ~lr~~ia~~~~~~~~~~~~~~-~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~ 159 (415)
+||+++|+++++.+|..++++ +|++|+|+++++..++.+++++||+|++++|+|+.+...++..|+++..++.+.++.+
T Consensus 72 ~lr~aia~~~~~~~g~~~~~~~~I~it~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~ 151 (405)
T PRK09148 72 GLRRAQAAYYARRFGVKLNPDTQVVATLGSKEGFANMAQAITAPGDVILCPNPSYPIHAFGFIMAGGVIRSVPAEPDEEF 151 (405)
T ss_pred HHHHHHHHHHHHHhCCCCCCCCcEEEcCChHHHHHHHHHHhcCCCCEEEEcCCCCcccHHHHHhcCCEEEEEeCCCCCCC
Confidence 999999999998888888887 8999999999999999999999999999999999999999999999999998665555
Q ss_pred CCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCC-CCCeE
Q 014936 160 EVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS-TVPIL 238 (415)
Q Consensus 160 ~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~-~~~~i 238 (415)
..++++..+...++++++++++||||||.++|.+++++|+++|+++|+++|+||+|..+.+++....++..+.. .++++
T Consensus 152 ~~~l~~~~~~~~~~~~~v~l~~P~NPtG~~~s~~~l~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~s~~~~~~~~~~~i 231 (405)
T PRK09148 152 FPALERAVRHSIPKPIALIVNYPSNPTAYVADLDFYKDVVAFAKKHDIIILSDLAYSEIYFDGNPPPSVLQVPGAKDVTV 231 (405)
T ss_pred ccCHHHHHhhccccceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCeEEEEeccchhhhcCCCCCCChhhCCCccCcEE
Confidence 44555544444467899999999999999999999999999999999999999999998887644444444432 34678
Q ss_pred EEccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhhcc-ccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHH
Q 014936 239 TLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFD-ILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVD 317 (415)
Q Consensus 239 ~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~ 317 (415)
+++||||.|+++|+|+||++++. ++++.+..... ...+++.+.|.++..+|+. .+.++++.++.++++++
T Consensus 232 ~~~SfSK~~~~pGlR~G~~v~~~--------~~i~~l~~~~~~~~~~~~~~~q~~~~~~L~~-~~~~~~~~~~~~~~~r~ 302 (405)
T PRK09148 232 EFTSMSKTFSMAGWRMGFAVGNE--------RLIAALTRVKSYLDYGAFTPIQVAATAALNG-PQDCIAEMRELYKKRRD 302 (405)
T ss_pred EEeccccccCCcchheeeeeCCH--------HHHHHHHHHHHHhccCCChHHHHHHHHHHhC-cHHHHHHHHHHHHHHHH
Confidence 99999999999999999999864 68888876643 3456788899999999974 35788999999999999
Q ss_pred HHHHHhhcCCCCcCCCCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCC--CCeEEEEeeCChhhHH
Q 014936 318 ICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGL--KNWLRVTFAVDPYSLE 395 (415)
Q Consensus 318 ~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~--~~~iRi~~~~~~~~l~ 395 (415)
.+.+.|+++ ++. +..|++|+|+|++++.... + .+..++...+++++||.+.||..|+. ++++||+++.++++++
T Consensus 303 ~l~~~L~~~-~~~-~~~p~~g~f~~~~l~~~~~-~-~~~~~~~~~ll~~~gV~v~pg~~f~~~~~~~~Ri~~~~~~~~l~ 378 (405)
T PRK09148 303 VLVESFGRA-GWD-IPPPAASMFAWAPIPEAFR-H-LGSLEFSKLLVEKADVAVAPGVGFGEHGDGYVRIALVENEQRIR 378 (405)
T ss_pred HHHHHHHHc-CCc-cCCCCeeEEEEEECCCccC-C-CCHHHHHHHHHHhCCEEEeCchhhCCCCCCeEEEEecCCHHHHH
Confidence 999999987 676 5478999999999874210 1 13567888888788999999998865 5799999998899999
Q ss_pred HHHHHHHHHHHHHHHHh
Q 014936 396 ECLDRIKSFYQRHAKQL 412 (415)
Q Consensus 396 ~~l~~l~~~~~~~~~~~ 412 (415)
+++++|.+++.++...+
T Consensus 379 ~al~~l~~~l~~~~~~~ 395 (405)
T PRK09148 379 QAARNIKRFLSSADETL 395 (405)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 99999999998776543
No 22
>PRK07337 aminotransferase; Validated
Probab=100.00 E-value=6.7e-52 Score=391.96 Aligned_cols=383 Identities=21% Similarity=0.381 Sum_probs=311.8
Q ss_pred CccccCCccCCcchhhHHHHHHHhhhcccccccCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcH
Q 014936 1 MEISNGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLP 80 (415)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~ 80 (415)
|+++++......+ .+....... .+.. ..++.+++|+.|+|+ +++++.+.+++.+.+... ...|+++.|.+
T Consensus 1 ~~~~~~~~~~~~~--~~~~~~~~~-~~~~--~~~~~~i~l~~~~~~----~~~~~~~~~~~~~~~~~~-~~~Y~~~~g~~ 70 (388)
T PRK07337 1 MRLAARVDAIEPF--YVMELAKEA-QALE--RAGRDIIHMGIGEPD----FTAPEPVVEAAARALRRG-VTQYTSALGLA 70 (388)
T ss_pred CchhhHhHhcCch--HHHHHHHHH-HHHH--hcCCCEEEeCCcCCC----CCCCHHHHHHHHHHHhcC-CCCCCCCCCCH
Confidence 5666665443333 333333222 2221 246788999999975 556788999998887643 45799888999
Q ss_pred HHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCC
Q 014936 81 LTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWE 160 (415)
Q Consensus 81 ~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~ 160 (415)
++|+++|+|+++.+|..+++++|++|+|+++++..++.+++++||+|++++|+|..+...++..|++++.++.+.++++.
T Consensus 71 ~lr~~ia~~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~ 150 (388)
T PRK07337 71 PLREAIAAWYARRFGLDVAPERIVVTAGASAALLLACLALVERGDEVLMPDPSYPCNRHFVAAAEGRPVLVPSGPAERFQ 150 (388)
T ss_pred HHHHHHHHHHHHHhCCCCChHhEEEecCcHHHHHHHHHHhcCCCCEEEEeCCCchhhHHHHHHcCCEEEEeecCCccCCc
Confidence 99999999999888888999999999999999999999999999999999999999999999999999999987666788
Q ss_pred CChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEE
Q 014936 161 VDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTL 240 (415)
Q Consensus 161 ~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~ 240 (415)
+|++++++.++++++++++++|+||||.+++.+++++|+++|+++++++|+||+|..+.+.+. ..+...+ .++++++
T Consensus 151 ~~~~~l~~~~~~~~~~v~l~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~-~~~~~~~--~~~vi~~ 227 (388)
T PRK07337 151 LTAADVEAAWGERTRGVLLASPSNPTGTSIAPDELRRIVEAVRARGGFTIVDEIYQGLSYDAA-PVSALSL--GDDVITI 227 (388)
T ss_pred CCHHHHHhhcCccceEEEEECCCCCCCcCcCHHHHHHHHHHHHHCCCEEEEeccccccccCCC-CcChhhc--cCCEEEE
Confidence 999999999988899999999999999999999999999999999999999999998887654 2222222 3578999
Q ss_pred ccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhhc-cccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHH
Q 014936 241 GSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYF-DILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDIC 319 (415)
Q Consensus 241 ~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l 319 (415)
+||||.|+++|+|+||+++++ ++++.+.... ....+.+.+.|.++..++......++++.++.++++++.+
T Consensus 228 ~S~SK~~~~~G~RiG~~~~~~--------~l~~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~r~~~ 299 (388)
T PRK07337 228 NSFSKYFNMTGWRLGWLVVPE--------ALVGTFEKLAQNLFICASALAQHAALACFEPDTLAIYERRRAEFKRRRDFI 299 (388)
T ss_pred EechhhcCCchhheeeeecCH--------HHHHHHHHHHHHhccCCChHHHHHHHHHhccCchHHHHHHHHHHHHHHHHH
Confidence 999999999999999999865 6777777664 3345678889999988887544455678889999999999
Q ss_pred HHHhhcCCCCcCCCCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCC---CCeEEEEeeCChhhHHH
Q 014936 320 YNKIKEIPCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGL---KNWLRVTFAVDPYSLEE 396 (415)
Q Consensus 320 ~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~---~~~iRi~~~~~~~~l~~ 396 (415)
.+.|+++ ++.....|++|+|+|++++....++..++.+++..+++++||.+.||..|+. .+++||+++.+++++++
T Consensus 300 ~~~L~~~-~~~~~~~p~~g~f~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~pg~~f~~~~~~~~~Ri~~~~~~~~l~~ 378 (388)
T PRK07337 300 VPALESL-GFKVPVMPDGAFYVYADCRGVAHPAAGDSAALTQAMLHDAGVVLVPGRDFGPHAPRDYIRLSYATSMSRLEE 378 (388)
T ss_pred HHHHHhc-CCccccCCCeeEEEEEecccccCCCCCCHHHHHHHHHHhCCEEEeCchhhCCCCCCCEEEEEecCCHHHHHH
Confidence 9999987 6552247899999999986421111225678888888889999999999875 57999999888999999
Q ss_pred HHHHHHHHH
Q 014936 397 CLDRIKSFY 405 (415)
Q Consensus 397 ~l~~l~~~~ 405 (415)
++++|.+++
T Consensus 379 ~l~rl~~~l 387 (388)
T PRK07337 379 AVARLGKLF 387 (388)
T ss_pred HHHHHHHHh
Confidence 999998764
No 23
>PRK08636 aspartate aminotransferase; Provisional
Probab=100.00 E-value=1.1e-51 Score=391.77 Aligned_cols=359 Identities=22% Similarity=0.333 Sum_probs=298.8
Q ss_pred cCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCC-cEEEeCChHH
Q 014936 33 NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPN-DVFVTSGCTQ 111 (415)
Q Consensus 33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~-~i~i~~g~~~ 111 (415)
++..+++|+.|+|+ ...++.+.+++.+.+.......|+++.|.++||+++|+|+++.+|+.++++ +|++|+|+++
T Consensus 31 ~~~~~~~l~~g~p~----~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lR~~ia~~l~~~~~~~~~~~~~I~it~G~~~ 106 (403)
T PRK08636 31 AGEDIIDFSMGNPD----GPTPQHIIDKLCESAQKPKTHGYSVSKGIYKLRLAICNWYKRKYNVDLDPETEVVATMGSKE 106 (403)
T ss_pred cCCCEEEcCCcCCC----CCCCHHHHHHHHHHhcCCccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEECCChHH
Confidence 46789999999876 334566777776665544457899999999999999999998889888988 7999999999
Q ss_pred HHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHH----HhhcC---CCceEEEecCCCC
Q 014936 112 AIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDI----ESLAD---QNTVALVIINPGN 184 (415)
Q Consensus 112 al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l----~~~~~---~~~~~v~i~~p~n 184 (415)
++.+++.+++++||+|++++|+|+.+...++..|+++..++.+.++++++|++.+ +++++ ++++++++++|||
T Consensus 107 al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~i~~~~P~N 186 (403)
T PRK08636 107 GYVHLVQAITNPGDVAIVPDPAYPIHSQAFILAGGNVHKMPLEYNEDFELDEDQFFENLEKALRESSPKPKYVVVNFPHN 186 (403)
T ss_pred HHHHHHHHhCCCCCEEEEcCCCCcchHHHHHhcCCEEEEEeccccccCccChhhhhhHHHHHHhhccCCceEEEEeCCCC
Confidence 9999999999999999999999999999999999999999885555678887754 55553 4678999999999
Q ss_pred ccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCC-CCCeEEEccCccccCCCCceEEEEEeeCCC
Q 014936 185 PCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS-TVPILTLGSLSKRWIVPGWRLGWFVTTDPC 263 (415)
Q Consensus 185 ptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~ 263 (415)
|||.++|.+++++|+++|++|+++||+||+|+.+.+++....++..++. .+++|+++||||.|+++|+|+||+++++
T Consensus 187 PTG~~~s~~~~~~l~~~a~~~~~~II~De~Y~~l~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlRiG~iv~~~-- 264 (403)
T PRK08636 187 PTTATVEKSFYERLVALAKKERFYIISDIAYADITFDGYKTPSILEVEGAKDVAVESYTLSKSYNMAGWRVGFVVGNK-- 264 (403)
T ss_pred CCCccCCHHHHHHHHHHHHHcCcEEEEeccchhhccCCCCCCChhcCCCccccEEEEEecccccCCccceeeeeeCCH--
Confidence 9999999999999999999999999999999999887655555555543 2467889999999999999999999865
Q ss_pred CCCChHHHHHHHHhhccc-cCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEE
Q 014936 264 GMFRKPKVVERMKKYFDI-LGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVM 342 (415)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~ 342 (415)
++++.+...... ..+.+.+.|.++..++.. .+.++++.++.++++++.+.+.|++. ++. +..|.+|+|+|
T Consensus 265 ------~li~~~~~~~~~~~~~~~~~~q~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~L~~~-~~~-~~~p~~g~~~~ 335 (403)
T PRK08636 265 ------KLVGALKKIKSWLDYGMFTPIQVAATIALDG-DQSCVEEIRETYRKRRDVLIESFANA-GWE-LQKPRASMFVW 335 (403)
T ss_pred ------HHHHHHHHHHHHhcccCChHHHHHHHHHHhC-cHHHHHHHHHHHHHHHHHHHHHHHHC-CCc-ccCCCcceEEE
Confidence 677777766432 345667788887777753 36788899999999999999999987 676 55889999999
Q ss_pred EecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCC--CCeEEEEeeCChhhHHHHHHHHHHHHHHH
Q 014936 343 LKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGL--KNWLRVTFAVDPYSLEECLDRIKSFYQRH 408 (415)
Q Consensus 343 ~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~--~~~iRi~~~~~~~~l~~~l~~l~~~~~~~ 408 (415)
++++.... + .++.+++..+++++||.+.||..|+. .+++||+++.+++++++++++|+++++.+
T Consensus 336 ~~l~~~~~-~-~~~~~l~~~ll~~~gV~v~pg~~f~~~~~~~iRi~~~~~~~~l~~~~~rl~~~l~~~ 401 (403)
T PRK08636 336 AKIPEPAR-H-LGSLEFSKQLLTEAKVAVSPGIGFGEYGDEYVRIALIENENRIRQAARNIKKFLKEL 401 (403)
T ss_pred EECCCccC-C-CCHHHHHHHHHHhCCEEEecchhhCcCCCCeEEEEecCCHHHHHHHHHHHHHHHHhh
Confidence 99974210 1 13577888888888999999998875 57999999988999999999999998763
No 24
>PRK09147 succinyldiaminopimelate transaminase; Provisional
Probab=100.00 E-value=1.3e-51 Score=390.75 Aligned_cols=348 Identities=24% Similarity=0.377 Sum_probs=296.5
Q ss_pred cCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCC-CCCC-cEEEeCChH
Q 014936 33 NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYK-LTPN-DVFVTSGCT 110 (415)
Q Consensus 33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~-~~~~-~i~i~~g~~ 110 (415)
.++++++|+.|+|+ +++++.+++++.+.+. ....|+++.|.++||++||+|+++.+|.. ++++ +|++|+|++
T Consensus 27 ~~~~~i~l~~~~p~----~~~~~~~~~~~~~~~~--~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~ 100 (396)
T PRK09147 27 ADLPPISLSIGEPK----HPTPAFIKDALAANLD--GLASYPTTAGLPALREAIAAWLERRYGLPALDPATQVLPVNGSR 100 (396)
T ss_pred cCCCeEecCCCCCC----CCCCHHHHHHHHHHhh--hhcCCCCCCCCHHHHHHHHHHHHHHhCCCcCCccceEEECCChH
Confidence 47899999999975 5667889999988765 35689999999999999999999888887 8885 899999999
Q ss_pred HHHHHHHHHhcCC---CCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccc
Q 014936 111 QAIDVAMALLSRP---GANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCG 187 (415)
Q Consensus 111 ~al~~~~~~l~~~---gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG 187 (415)
+++..++++++++ ||.|+++.|+|..+...++..|++++.+|.+++++|.+|++.+++.+.++++++++++||||||
T Consensus 101 ~al~~~~~~l~~~~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~vp~~~~~~~~~d~~~l~~~~~~~~k~i~l~nP~NPTG 180 (396)
T PRK09147 101 EALFAFAQTVIDRDGPGPLVVCPNPFYQIYEGAALLAGAEPYFLNCDPANNFAPDFDAVPAEVWARTQLLFVCSPGNPTG 180 (396)
T ss_pred HHHHHHHHHHcCCCCCCCEEEEcCCCccchHHHHHhcCCEEEEeccCccccCccCHHHHHHHHhhccEEEEEcCCCCCcC
Confidence 9999999999999 8999999999999999999999999999987777788999999888777899999999999999
Q ss_pred cCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCC-ccc-cc---ccC--CCCCeEEEccCccccCCCCceEEEEEee
Q 014936 188 NVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKP-FVP-MG---VFG--STVPILTLGSLSKRWIVPGWRLGWFVTT 260 (415)
Q Consensus 188 ~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~-~~~-~~---~~~--~~~~~i~~~s~sK~~~~~G~r~G~~~~~ 260 (415)
.++|.+++++|+++|++|+++||+||+|..+.+++.. ..+ +. ..+ ..+++|+++||||.|+++|+|+||++++
T Consensus 181 ~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~~GlRiG~~~~~ 260 (396)
T PRK09147 181 AVLPLDDWKKLFALSDRYGFVIASDECYSEIYFDEAAPPLGLLEAAAELGRDDFKRLVVFHSLSKRSNVPGLRSGFVAGD 260 (396)
T ss_pred ccCCHHHHHHHHHHHHHcCeEEEeeccccccccCCCCCCchhhhhccccCccccccEEEEeccccccCCccceeeeecCC
Confidence 9999999999999999999999999999998876531 111 11 122 2368999999999999999999999986
Q ss_pred CCCCCCChHHHHHHHHhhcc-ccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCce
Q 014936 261 DPCGMFRKPKVVERMKKYFD-ILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSM 339 (415)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~ 339 (415)
+ ++++.+..... ...+.+++.|.++.+.+.. +.++++.++.++++++.+.+.|++. +. +..|.+|+
T Consensus 261 ~--------~l~~~~~~~~~~~~~~~~~~~q~a~~~~~~~--~~~~~~~~~~~~~~~~~~~~~L~~~--~~-~~~p~~g~ 327 (396)
T PRK09147 261 A--------ALLKKFLLYRTYHGCAMPPAVQAASIAAWND--EAHVRENRALYREKFDAVTPILAPV--LD-VQLPDAGF 327 (396)
T ss_pred H--------HHHHHHHHHhhhcccCCCHHHHHHHHHHhcc--hhHHHHHHHHHHHHHHHHHHHHHHh--cC-CCCCCeeE
Confidence 5 67777766543 3456778888887777753 4788899999999999999999874 44 44799999
Q ss_pred EEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCC--------CCeEEEEeeCChhhHHHHHHHHHHHHH
Q 014936 340 AVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGL--------KNWLRVTFAVDPYSLEECLDRIKSFYQ 406 (415)
Q Consensus 340 ~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~--------~~~iRi~~~~~~~~l~~~l~~l~~~~~ 406 (415)
|+|++++. ++.+++..+++++||.+.||..|+. .+++||+++.+++++++++++|.+++.
T Consensus 328 f~~~~~~~-------~~~~~~~~ll~~~gv~v~pg~~f~~~~~~~~~~~~~iRi~~~~~~~~l~~~l~rl~~~~~ 395 (396)
T PRK09147 328 YLWAKVPG-------DDTEFARRLYADYNVTVLPGSYLAREAHGVNPGAGRVRIALVAPLAECVEAAERIVDFCR 395 (396)
T ss_pred EEEEECCC-------CHHHHHHHHHHhCCEEEeCCccccccccCCCCCCCeEEEEecCCHHHHHHHHHHHHHHhc
Confidence 99999872 4677888888888999999998752 479999999889999999999998763
No 25
>PRK06348 aspartate aminotransferase; Provisional
Probab=100.00 E-value=1e-51 Score=389.73 Aligned_cols=350 Identities=26% Similarity=0.497 Sum_probs=299.2
Q ss_pred cceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHH
Q 014936 35 KKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAID 114 (415)
Q Consensus 35 ~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~ 114 (415)
.++++|+.|+|. +++++.+.+++.+.... ....|+++.|.++||+++++++++.+|.++++++|++|+|+++++.
T Consensus 29 ~~~i~l~~g~p~----~~~~~~~~~~~~~~~~~-~~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~i~it~G~~~al~ 103 (384)
T PRK06348 29 PDIIDLSLGDPD----LITDESIINAAFEDAKK-GHTRYTDSGGDVELIEEIIKYYSKNYDLSFKRNEIMATVGACHGMY 103 (384)
T ss_pred CCcEEcCCCCCC----CCCCHHHHHHHHHHHhc-CCCCCCCCCCcHHHHHHHHHHHHHHhCCCCChhhEEEcCChHHHHH
Confidence 468999999875 55667777766555443 3468999999999999999999988898999999999999999999
Q ss_pred HHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHH
Q 014936 115 VAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQH 194 (415)
Q Consensus 115 ~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~ 194 (415)
+++.+++++||+|++++|+|..+...++..|.+++.++..+++++.+|++++++.++++++++++++||||||.++|.++
T Consensus 104 ~~~~~~~~~gd~vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~l~~p~NPtG~~~s~~~ 183 (384)
T PRK06348 104 LALQSILDPGDEVIIHEPYFTPYKDQIEMVGGKPIILETYEEDGFQINVKKLEALITSKTKAIILNSPNNPTGAVFSKET 183 (384)
T ss_pred HHHHHhcCCCCEEEEeCCCCcchHHHHHHcCCEEEEecCCcCcCCcCCHHHHHHhhCcCccEEEEeCCCCCCCcCCCHHH
Confidence 99999999999999999999999999999999999888765567889999999998888899999999999999999999
Q ss_pred HHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCC-CCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHH
Q 014936 195 LQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS-TVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVE 273 (415)
Q Consensus 195 l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~ 273 (415)
+++|+++|+++|+++|+||+|.++.+++. ..++..+.. .+++++++||||.|+++|+|+||+++++ ++++
T Consensus 184 ~~~l~~~a~~~~~~ii~De~y~~~~~~~~-~~~~~~~~~~~~~vi~~~SfSK~~~l~GlRiG~~v~~~--------~~~~ 254 (384)
T PRK06348 184 LEEIAKIAIEYDLFIISDEVYDGFSFYED-FVPMATLAGMPERTITFGSFSKDFAMTGWRIGYVIAPD--------YIIE 254 (384)
T ss_pred HHHHHHHHHHCCeEEEEecccccceeCCC-ccchhhcCCCcCcEEEEecchhccCCccccceeeecCH--------HHHH
Confidence 99999999999999999999999988643 334444432 4689999999999999999999999965 6777
Q ss_pred HHHhhcc-ccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCccccCC
Q 014936 274 RMKKYFD-ILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLDD 352 (415)
Q Consensus 274 ~~~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~~~ 352 (415)
.+..... ...+++++.|.++..+|.. .+.++++.++.++++++.+.+.|++++++. +..|++|+|+|++++...
T Consensus 255 ~~~~~~~~~~~~~~~~~q~~~~~~l~~-~~~~~~~~~~~~~~r~~~~~~~L~~~~~~~-~~~p~gg~~~~~~~~~~~--- 329 (384)
T PRK06348 255 TAKIINEGICFSAPTISQRAAIYALKH-RDTIVPLIKEEFQKRLEYAYKRIESIPNLS-LHPPKGSIYAFINIKKTG--- 329 (384)
T ss_pred HHHHHHHhccCCCCHHHHHHHHHHHhC-cHHHHHHHHHHHHHHHHHHHHHHhcCCCce-eccCCeeEEEEEecccCC---
Confidence 7766543 3466788999999999874 357788899999999999999999887776 557889999999986421
Q ss_pred CCCHHHHHHHHHhhcCeEEEcCCCCCC--CCeEEEEeeCChhhHHHHHHHHHHH
Q 014936 353 IIDDIDFCFKLAKEESVIILPGTAVGL--KNWLRVTFAVDPYSLEECLDRIKSF 404 (415)
Q Consensus 353 ~~~~~~~~~~ll~~~gi~v~~g~~~~~--~~~iRi~~~~~~~~l~~~l~~l~~~ 404 (415)
.++.+++..+++++||.+.||+.|+. ++++||+++.+.+++++++++|++.
T Consensus 330 -~~~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~~~~~~l~~al~~l~~~ 382 (384)
T PRK06348 330 -LSSVEFCEKLLKEAHVLVIPGKAFGESGEGYIRLACTVGIEVLEEAFNRIEKM 382 (384)
T ss_pred -CCHHHHHHHHHHhCCEEEcCchhhccCCCCeEEEEecCCHHHHHHHHHHHHhh
Confidence 25778888887788999999999875 5799999988899999999998764
No 26
>PTZ00377 alanine aminotransferase; Provisional
Probab=100.00 E-value=7.5e-52 Score=400.18 Aligned_cols=373 Identities=24% Similarity=0.434 Sum_probs=299.6
Q ss_pred CcceeEecccCCC----------------CCC-C--------CCCcHHHHHHHHHHHhcC--CCCCCCCCCCcHHHHHHH
Q 014936 34 EKKVISLAMGDPT----------------VHS-C--------FHTTHVATEAVAEALLSE--KFNGYAPTAGLPLTRRAI 86 (415)
Q Consensus 34 ~~~~i~l~~g~~~----------------~~~-~--------~~~~~~~~~a~~~~~~~~--~~~~y~~~~g~~~lr~~i 86 (415)
+.++|+|+.|+|+ ... + ...+..+++++.+.+... ....|+++.|.++||++|
T Consensus 45 ~~~vi~~~~G~p~~~~~~~~~~~~~~~~~~~~p~~i~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~ai 124 (481)
T PTZ00377 45 FDSIVYCNIGNPQALGQKPLTFYRQVLSLVEYPFLLEDPSVSSLFPADVVARAKEYLNAIGGGTGAYTDSAGYPFVRKAV 124 (481)
T ss_pred cceeEEcCCCChhhcCCCCchHHHHHHHHccChhhhcCccccccCCHHHHHHHHHHHHhCCCcccCcCcccCCHHHHHHH
Confidence 5799999999995 211 0 001446777777666542 345799999999999999
Q ss_pred HHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhc-CCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhH
Q 014936 87 AEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLS-RPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDD 165 (415)
Q Consensus 87 a~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~-~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 165 (415)
|+|+++.+|+.+++++|++|+|+++++..++.+++ ++||.|+++.|+|+.|...++..|.+++.++.+++++|.+|++.
T Consensus 125 a~~~~~~~g~~~~~~~I~it~Ga~~al~~~~~~l~~~~gD~Vlv~~P~y~~y~~~~~~~g~~~v~v~~~~~~~~~~d~~~ 204 (481)
T PTZ00377 125 AAFIERRDGVPKDPSDIFLTDGASSGIKLLLQLLIGDPSDGVMIPIPQYPLYSAAITLLGGKQVPYYLDEEKGWSLDQEE 204 (481)
T ss_pred HHHHHHhcCCCCChhhEEEcCCHHHHHHHHHHHhccCCCCEEEECCCCchhHHHHHHHcCCEEEEEEeccccCCCCCHHH
Confidence 99999888999999999999999999999999998 79999999999999999999999999999998777788999999
Q ss_pred HHhhcCC------CceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCC-CCccccc----ccCCC
Q 014936 166 IESLADQ------NTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGD-KPFVPMG----VFGST 234 (415)
Q Consensus 166 l~~~~~~------~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~-~~~~~~~----~~~~~ 234 (415)
|++.+++ +++++++++||||||.++|.+++++|+++|+++|++||+||+|..+.|++ ..+.++. .+...
T Consensus 205 l~~~l~~~~~~~~~~k~l~l~~P~NPTG~~~s~e~~~~i~~~a~~~~~~iI~De~Y~~l~~~~~~~~~s~~~~~~~l~~~ 284 (481)
T PTZ00377 205 LEEAYEQAVRNGITPRALVVINPGNPTGQVLTRDVMEEIIKFCYEKGIVLMADEVYQENIYDGEKPFISFRKVLLELPAE 284 (481)
T ss_pred HHHHHHHHHhcCCCeeEEEEECCCCCCCcCCCHHHHHHHHHHHHHCCCEEEEehhhHhhccCCCCCcccHHHHHHhhccc
Confidence 9998864 68889999999999999999999999999999999999999999998853 3333332 22221
Q ss_pred ----CCeEEEccCccc-cCCCCceEEEEEeeCCCCCCChHHHHHHHHhhccccCCchhHHHHHHHHhhCCCc------HH
Q 014936 235 ----VPILTLGSLSKR-WIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQAAVPSILQQPD------EV 303 (415)
Q Consensus 235 ----~~~i~~~s~sK~-~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~------~~ 303 (415)
.++|+++||||. ++++|+|+||+++.+ ..+++++.+........+++.++|.++..+|+... +.
T Consensus 285 ~~~~~~vi~~~S~SK~~~~~~GlRiG~~~~~~-----~p~~li~~l~~~~~~~~~~~~~~Q~a~~~~l~~~~~~~~~~~~ 359 (481)
T PTZ00377 285 YNTDVELVSFHSTSKGIIGECGRRGGYFELTN-----IPPEVREQIYKLASINLCSNVVGQLMTGLMCNPPREGDASYPL 359 (481)
T ss_pred ccCCeEEEEEecCCcccccCCcCceEEEEEeC-----CCHHHHHHHHHHhheecCCChHHHHHHHHHhCCCCCCcccHHH
Confidence 368999999997 588999999998721 01268888877654345688899999999986411 12
Q ss_pred H---HHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCcc-cc------CCCCCHHHHHHHHHhhcCeEEEc
Q 014936 304 F---FKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLS-LL------DDIIDDIDFCFKLAKEESVIILP 373 (415)
Q Consensus 304 ~---~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~-~~------~~~~~~~~~~~~ll~~~gi~v~~ 373 (415)
+ +++..+.++++++.+.+.|++++++. +..|++|+|+|++++.+ .. .+..++..++..+++++||.+.|
T Consensus 360 ~~~~~~~~~~~~~~rr~~l~~~L~~~~g~~-~~~p~gg~fl~~~~~l~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~p 438 (481)
T PTZ00377 360 YKRERDAIFTSLKRRAELLTDELNKIEGVS-CQPVEGAMYAFPRIELPEKAIQEAKERGLAPDVLYCLELLESTGIVVVP 438 (481)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCcE-eecCCeeEEEEeeccCchhhHHHHHhcCCCcHHHHHHHHHHHcCEEEeC
Confidence 3 33344567899999999999988888 55899999999876421 00 00113456778888999999999
Q ss_pred CCCCCC---CCeEEEEeeCChhhHHHHHHHHHHHHHHHHHHh
Q 014936 374 GTAVGL---KNWLRVTFAVDPYSLEECLDRIKSFYQRHAKQL 412 (415)
Q Consensus 374 g~~~~~---~~~iRi~~~~~~~~l~~~l~~l~~~~~~~~~~~ 412 (415)
|+.|+. .+++|+|++.+++++++++++|.++++++.++.
T Consensus 439 G~~F~~~~~~~~~Rls~~~~~e~l~~~l~rl~~~~~~~~~~~ 480 (481)
T PTZ00377 439 GSGFGQKPGTYHFRITILPPEEQIEEMVKKIKEFHESFMKKY 480 (481)
T ss_pred CcccCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHhh
Confidence 999974 469999999888999999999999999887764
No 27
>PRK05942 aspartate aminotransferase; Provisional
Probab=100.00 E-value=1.9e-51 Score=389.12 Aligned_cols=352 Identities=21% Similarity=0.369 Sum_probs=298.0
Q ss_pred cCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCC-cEEEeCChHH
Q 014936 33 NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPN-DVFVTSGCTQ 111 (415)
Q Consensus 33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~-~i~i~~g~~~ 111 (415)
.+.++++|+.|+|. .++++.+.+++.+.+.......|+++.|.++||+++|+|+++.++..++++ +|++|+|+++
T Consensus 33 ~g~~~i~l~~g~p~----~~~p~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~i~vt~G~~~ 108 (394)
T PRK05942 33 QGLDLIDLGMGNPD----GAAPQPVIEAAIAALADPQNHGYPPFEGTASFRQAITDWYHRRYGVELDPDSEALPLLGSKE 108 (394)
T ss_pred cCCCeEEcCCCCCC----CCCCHHHHHHHHHHHhCCCCccCCCCCCCHHHHHHHHHHHHHHHCCCcCCCCeEEEccChHH
Confidence 46779999999875 344666777776666544456899999999999999999998888888888 5899999999
Q ss_pred HHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCC
Q 014936 112 AIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYS 191 (415)
Q Consensus 112 al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~ 191 (415)
++..++.+++++||+|++++|+|+.+...+...|++++.++++.+++|.+|++++++.+.++++++++++||||||.+++
T Consensus 109 al~~~~~~~~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~~~k~i~l~~P~NPtG~~~s 188 (394)
T PRK05942 109 GLTHLALAYVNPGDVVLVPSPAYPAHFRGPLIAGAQIYPIILKPENDWLIDLSSIPEEVAQQAKILYFNYPSNPTTATAP 188 (394)
T ss_pred HHHHHHHHhCCCCCEEEEcCCCCcchHHHHHHcCCEEEEeecCCccCCccCHHHHHHhccccceEEEEcCCCCCCCCcCC
Confidence 99999999999999999999999999998899999999999876667889999999988888999999999999999999
Q ss_pred HHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCC-CCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHH
Q 014936 192 YQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS-TVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPK 270 (415)
Q Consensus 192 ~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~ 270 (415)
.+++++|+++|+++|+++|+||+|..+.+++....++..+.. .+++|+++||||.|+++|+|+||+++++ +
T Consensus 189 ~~~~~~i~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~~~~GlRiG~i~~~~--------~ 260 (394)
T PRK05942 189 REFFEEIVAFARKYEIMLVHDLCYAELAFDGYQPTSLLEIPGAKDIGVEFHTLSKTYNMAGWRVGFVVGNR--------H 260 (394)
T ss_pred HHHHHHHHHHHHHcCeEEEEeccchhhccCCCCCCChhhCCCccccEEEEecchhccCChhhheeeeecCH--------H
Confidence 999999999999999999999999998887654445544432 3467999999999999999999999865 6
Q ss_pred HHHHHHhhcc-ccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCccc
Q 014936 271 VVERMKKYFD-ILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSL 349 (415)
Q Consensus 271 ~~~~~~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~ 349 (415)
+++.++.... ...+.+..+|.++..+|+. .+.++++.+++++++++.+.+.|+++ ++. +..|.+|+|+|++++..
T Consensus 261 l~~~l~~~~~~~~~~~~~~~q~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~L~~~-~~~-~~~~~~~~f~~~~~~~~- 336 (394)
T PRK05942 261 IIQGLRTLKTNLDYGIFSALQKAAETALQL-PDSYLQQVQERYRTRRDFLIQGLGEL-GWN-IPPTKATMYLWVPCPVG- 336 (394)
T ss_pred HHHHHHHHHhhcccCCCHHHHHHHHHHHhC-cHHHHHHHHHHHHHHHHHHHHHHHHC-CCe-ecCCCeeeEEEEECCCC-
Confidence 8888876643 3456778899999999964 35788899999999999999999887 676 54788899999998742
Q ss_pred cCCCCCHHHHHHHHHhhcCeEEEcCCCCCC--CCeEEEEeeCChhhHHHHHHHHHHH
Q 014936 350 LDDIIDDIDFCFKLAKEESVIILPGTAVGL--KNWLRVTFAVDPYSLEECLDRIKSF 404 (415)
Q Consensus 350 ~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~--~~~iRi~~~~~~~~l~~~l~~l~~~ 404 (415)
.++.++...+++++||.+.||..|+. ++++||+++.+.+.+.+++++|.++
T Consensus 337 ----~~~~~~~~~~l~~~gV~v~~g~~f~~~~~~~iRis~~~~~~~l~~~l~~l~~~ 389 (394)
T PRK05942 337 ----MGSTDFALNVLQKTGVVVTPGNAFGEGGEGYVRISLIADCDRLGEALDRLKQA 389 (394)
T ss_pred ----CCHHHHHHHHHHHCCEEEeCChhhCcCCCCeEEEEecCCHHHHHHHHHHHHHh
Confidence 24667777788889999999998864 5799999987788888888888764
No 28
>PRK05764 aspartate aminotransferase; Provisional
Probab=100.00 E-value=3.3e-51 Score=388.45 Aligned_cols=387 Identities=28% Similarity=0.452 Sum_probs=323.2
Q ss_pred CccccCCccCCcchhhHHHHHHHhhhcccccccCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcH
Q 014936 1 MEISNGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLP 80 (415)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~ 80 (415)
|++|.++.+..++ .+........+.. ..+.++++|+.|+|. +++++.+.+++.+.+.... ..|++..|..
T Consensus 2 ~~~~~~~~~~~~~--~~~~~~~~~~~~~---~~~~~~~~l~~~~~~----~~~~~~~~~~~~~~~~~~~-~~Y~~~~g~~ 71 (393)
T PRK05764 2 MKLSKRVSRVTPS--ATLAVTAKAKELK---AQGRDVISLGAGEPD----FDTPEHIKEAAIEALDDGK-TKYTPAAGIP 71 (393)
T ss_pred cchhhhhhhcCch--HHHHHHHHHHHHH---hccCCEEEeCCCCCC----CCCCHHHHHHHHHHHhcCC-CCcCCCCChH
Confidence 6788888888777 4444443322222 336789999999975 5667899999998887543 4699888999
Q ss_pred HHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCC
Q 014936 81 LTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWE 160 (415)
Q Consensus 81 ~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~ 160 (415)
+||+.+++++.+.+|.++++++|++|+|+++++..++.+++++||.|++++|+|..+...++..|.++..++.++++++.
T Consensus 72 ~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~~~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~ 151 (393)
T PRK05764 72 ELREAIAAKLKRDNGLDYDPSQVIVTTGAKQALYNAFMALLDPGDEVIIPAPYWVSYPEMVKLAGGVPVFVPTGEENGFK 151 (393)
T ss_pred HHHHHHHHHHHHHhCCCCCHHHEEEeCCcHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCCEEEEEecCcccCCc
Confidence 99999999999888888899999999999999999999999999999999999999999999999999999987666788
Q ss_pred CChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCccccccc--CCCCCeE
Q 014936 161 VDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVF--GSTVPIL 238 (415)
Q Consensus 161 ~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~--~~~~~~i 238 (415)
+|++.+++.++++++++++++|+||||.++|.+++++|+++|+++|+++|+||+|+.+.+++....++..+ +..++++
T Consensus 152 ~d~~~l~~~l~~~~~~v~~~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~i 231 (393)
T PRK05764 152 LTVEQLEAAITPKTKALILNSPSNPTGAVYSPEELEAIADVAVEHDIWVLSDEIYEKLVYDGAEFTSIASLSPELRDRTI 231 (393)
T ss_pred CCHHHHHHhhCccceEEEEECCCCCCCcccCHHHHHHHHHHHHHCCcEEEEeccccceeeCCCCcccHHHcCCCCcCCEE
Confidence 99999999998889999999999999999999999999999999999999999999988765443444443 2345799
Q ss_pred EEccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhhcc-ccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHH
Q 014936 239 TLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFD-ILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVD 317 (415)
Q Consensus 239 ~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~ 317 (415)
+++||||.|+++|+|+||++++. ++++.+..... ....++++.|.++..+|+. .++++++.++.++++++
T Consensus 232 ~~~s~SK~~~~~G~RiG~i~~~~--------~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~-~~~~~~~~~~~~~~~~~ 302 (393)
T PRK05764 232 TVNGFSKAYAMTGWRLGYAAGPK--------ELIKAMSKLQSHSTSNPTSIAQYAAVAALNG-PQDEVEEMRQAFEERRD 302 (393)
T ss_pred EEecCcccccCccceeEEEecCH--------HHHHHHHHHHhhcccCCChHHHHHHHHHHcC-ChHHHHHHHHHHHHHHH
Confidence 99999999999999999999754 67777766532 3457788999999999973 35788889999999999
Q ss_pred HHHHHhhcCCCCcCCCCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEeeCChhhHHHH
Q 014936 318 ICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFAVDPYSLEEC 397 (415)
Q Consensus 318 ~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~~~l~~~ 397 (415)
.+.+.|++++++. +..|.+|+|+|++++........++.++...+++++||.+.||..|+.++++||+++.++++++++
T Consensus 303 ~l~~~L~~~~g~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~vRis~~~~~~~~~~~ 381 (393)
T PRK05764 303 LMVDGLNEIPGLE-CPKPEGAFYVFPNVSKLLGKSITDSLEFAEALLEEAGVAVVPGIAFGAPGYVRLSYATSLEDLEEG 381 (393)
T ss_pred HHHHHHhhCCCCc-ccCCCcceEEEEecccccccccCCHHHHHHHHHHhCCEEEccccccCCCCEEEEEecCCHHHHHHH
Confidence 9999999987888 557888999999886532111113477888888888999999999887899999998899999999
Q ss_pred HHHHHHHHHH
Q 014936 398 LDRIKSFYQR 407 (415)
Q Consensus 398 l~~l~~~~~~ 407 (415)
+++|.+++++
T Consensus 382 i~~l~~~~~~ 391 (393)
T PRK05764 382 LERIERFLES 391 (393)
T ss_pred HHHHHHHHHh
Confidence 9999998865
No 29
>PLN02607 1-aminocyclopropane-1-carboxylate synthase
Probab=100.00 E-value=1.5e-51 Score=391.67 Aligned_cols=395 Identities=19% Similarity=0.313 Sum_probs=314.1
Q ss_pred ccccCCccCCcc-hhhHHHHHHHhhh-cccccccCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhc-----------C
Q 014936 2 EISNGGIDNTGS-IITIKGMLSLLMQ-SVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLS-----------E 68 (415)
Q Consensus 2 ~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~-----------~ 68 (415)
.+|+|+...... ..+....+..+.. .+++..|+.++|+|+.+.+ ......+.+.+++.... .
T Consensus 12 ~ls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~np~g~i~l~~aeN-----~l~~d~l~~~~~~~~~~~~~~~~~~~~~~ 86 (447)
T PLN02607 12 GLSKVAVSETHGEDSPYFAGWKAYDEDPYDESHNPSGVIQMGLAEN-----QVSFDLLEEYLKQHPEASSWGGKGAPGFR 86 (447)
T ss_pred hhhhhhhhcccCCCchHHHHHHHhcCCCCCcccCCCceEEEechhh-----hhhHHHHHHHHHhCchhhccccccccccc
Confidence 456666555532 1233344433343 4677788999999999984 44567777777664320 1
Q ss_pred CCCCCCCCCCcHHHHHHHHHHHhhhCC--CCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHH-hCC
Q 014936 69 KFNGYAPTAGLPLTRRAIAEYLSRDLP--YKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAA-FRH 145 (415)
Q Consensus 69 ~~~~y~~~~g~~~lr~~ia~~~~~~~~--~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~-~~g 145 (415)
.+..|.++.|.++||+++|+|++++++ ..+++++|++|+|+++++.+++.+++++||.|+++.|+|+.+...+. ..|
T Consensus 87 ~~~~y~~~~G~~~LR~aiA~~l~~~~~~~~~v~p~~Ivit~G~t~al~~l~~~l~~pGD~Vlv~~P~Y~~f~~~~~~~~g 166 (447)
T PLN02607 87 ENALFQDYHGLKSFRQAMASFMEQIRGGKARFDPDRIVLTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTG 166 (447)
T ss_pred hhhccCCCcchHHHHHHHHHHHHHhcCCCCCcCHHHeEEcCChHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHHHhcCC
Confidence 234688889999999999999998776 35899999999999999999999999999999999999999987776 579
Q ss_pred CeEEEeeccCCCCCCCChhHHHhhcCC------CceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcc
Q 014936 146 IEVRHFDLLPDKGWEVDLDDIESLADQ------NTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLV 219 (415)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~l~~~~~~------~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~ 219 (415)
++++.++.+.+++|.+|++.+++++++ ++++++++|||||||.++|.+++++|+++|+++|+++|+||+|+.+.
T Consensus 167 ~~vv~v~~~~~~~f~~~~~~le~a~~~a~~~~~~vk~lll~nP~NPtG~~~s~e~l~~l~~~~~~~~i~lI~DEiYa~~~ 246 (447)
T PLN02607 167 VKIVPIHCDSSNNFQVTPQALEAAYQEAEAANIRVRGVLITNPSNPLGATVQRSVLEDILDFVVRKNIHLVSDEIYSGSV 246 (447)
T ss_pred cEEEEEeCCCCCCCcCCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCCEEEEeccccccc
Confidence 999999887667788999999988753 67899999999999999999999999999999999999999999988
Q ss_pred cCCCCccccccc----C---CCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhhccccCCchhHHHHH
Q 014936 220 FGDKPFVPMGVF----G---STVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQAA 292 (415)
Q Consensus 220 ~~~~~~~~~~~~----~---~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 292 (415)
|++..+.++..+ + ..+++++++||||.|+++|+|+||+++.+ +++.+.++.... ...++.++|.+
T Consensus 247 f~~~~f~S~~s~~~~~~~~~~~~~v~vi~s~SK~fg~~GlRvG~ivs~n-------~~l~~~~~~~~~-~~~~s~~~q~~ 318 (447)
T PLN02607 247 FSASEFVSVAEIVEARGYKGVAERVHIVYSLSKDLGLPGFRVGTIYSYN-------DKVVTTARRMSS-FTLVSSQTQHL 318 (447)
T ss_pred cCCCCcccHHHHHhhcCCCCCcCcEEEEEcchhcCCCCcceEEEEEEcC-------HHHHHHHHHHhh-cCCCCHHHHHH
Confidence 876555554432 1 14679999999999999999999999844 246666655433 23567889999
Q ss_pred HHHhhCCCc--HHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCcccc-CCCCCHHHHHHHHHhhcCe
Q 014936 293 VPSILQQPD--EVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLL-DDIIDDIDFCFKLAKEESV 369 (415)
Q Consensus 293 ~~~~l~~~~--~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~-~~~~~~~~~~~~ll~~~gi 369 (415)
+..+|++.. +.++++.+++++++++.+.+.|++. ++. +..|.+|+|+|++++.... .....+.+++..+++++||
T Consensus 319 ~~~~L~d~~~~~~~l~~~r~~l~~~~~~~~~~L~~~-gi~-~~~~~ag~fvw~~L~~~~~~~~~~~e~~l~~~ll~~~gV 396 (447)
T PLN02607 319 LASMLSDEEFTENYIRTNRERLRKRYEMIVQGLRRA-GIE-CLKGNAGLFCWMNLSPLLETPTREGELALWDSILREVKL 396 (447)
T ss_pred HHHHhCCchhHHHHHHHHHHHHHHHHHHHHHHHHhC-CCC-cccCCeeEEEEEEchHhhcCCCchhHHHHHHHHHHhCCE
Confidence 999998753 3677888999999999999999987 777 5578999999999964211 0111234677788888899
Q ss_pred EEEcCCCCCC--CCeEEEEeeC-ChhhHHHHHHHHHHHHHHHHHH
Q 014936 370 IILPGTAVGL--KNWLRVTFAV-DPYSLEECLDRIKSFYQRHAKQ 411 (415)
Q Consensus 370 ~v~~g~~~~~--~~~iRi~~~~-~~~~l~~~l~~l~~~~~~~~~~ 411 (415)
.+.||..|+. ++|+||+++. +++++++++++|.+++++...+
T Consensus 397 ~v~pG~~f~~~~~g~fRi~fa~~~~~~l~~gl~Ri~~~l~~~~~~ 441 (447)
T PLN02607 397 NISPGSSCHCSEPGWFRVCFANMSEDTLEVALKRIHRFMDRRKTA 441 (447)
T ss_pred EEcCccccCCCCCCEEEEEeccCCHHHHHHHHHHHHHHHHHHHhh
Confidence 9999998865 7999999985 8999999999999999876543
No 30
>KOG0257 consensus Kynurenine aminotransferase, glutamine transaminase K [Amino acid transport and metabolism]
Probab=100.00 E-value=1.9e-52 Score=368.93 Aligned_cols=349 Identities=28% Similarity=0.442 Sum_probs=298.8
Q ss_pred ecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCC-CcEEEeCChHHHHHHHHH
Q 014936 40 LAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTP-NDVFVTSGCTQAIDVAMA 118 (415)
Q Consensus 40 l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~-~~i~i~~g~~~al~~~~~ 118 (415)
|+.|.|+ +++|+-+.+++++.+.....++|....|+++|++.|++.++..+|..+.+ ++|++|.|+.+++..++.
T Consensus 36 LgqGfp~----~~~P~fv~ea~~~~~~~~~~~qYt~~~G~p~L~~aL~k~~se~~~~~~~~~~eVlVT~GA~~ai~~~~~ 111 (420)
T KOG0257|consen 36 LGQGFPD----FPPPKFVTEAAKNAAKEPSTNQYTRGYGLPQLRKALAKAYSEFYGGLLDPDDEVLVTAGANEAISSALL 111 (420)
T ss_pred ccCCCCC----CCCcHHHHHHHHHHhccchhccccccCCchHHHHHHHHHHHHHhccccCCcccEEEecCchHHHHHHHH
Confidence 9999875 88899999999999887767899999999999999999999977766555 579999999999999999
Q ss_pred HhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeecc------CCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCH
Q 014936 119 LLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLL------PDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSY 192 (415)
Q Consensus 119 ~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~------~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~ 192 (415)
+++++||+|++.+|.|.+|....+..|..++.++.. ...+|.+|.+.++.++.++|++|++++||||||.+++.
T Consensus 112 ~l~~~GDeVii~eP~fd~Y~~~~~maG~tpv~v~~~~~~g~~~s~~~~~D~~~le~~~t~kTk~Ii~ntPhNPtGkvfsR 191 (420)
T KOG0257|consen 112 GLLNPGDEVIVFEPFFDCYIPQVVMAGGTPVFVPLKPKEGNVSSSDWTLDPEELESKITEKTKAIILNTPHNPTGKVFSR 191 (420)
T ss_pred HHcCCCCEEEEecCcchhhhhHHhhcCCcceeeccccccccccCccccCChHHHHhhccCCccEEEEeCCCCCcCcccCH
Confidence 999999999999999999999999999999999876 34568899999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhcCcEEEEccccCCcccCCCCccccccc-CCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHH
Q 014936 193 QHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVF-GSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKV 271 (415)
Q Consensus 193 ~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~-~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~ 271 (415)
++|++|+++|++||+++|.||+|.++.+++..+..+..+ +..++++.++|+||+|++.|||+||++.++ .+
T Consensus 192 eeLe~ia~l~~k~~~lvisDevYe~~v~d~~~h~r~aslPgm~ertitvgS~gKtf~~TGWrlGW~igp~--------~L 263 (420)
T KOG0257|consen 192 EELERIAELCKKHGLLVISDEVYEWLVYDGNKHIRIASLPGMYERTITVGSFGKTFGVTGWRLGWAIGPK--------HL 263 (420)
T ss_pred HHHHHHHHHHHHCCEEEEEhhHhHHHhhCCCcceeeecCCchhheEEEeccccceeeeeeeeeeeeechH--------Hh
Confidence 999999999999999999999999999999877766666 446789999999999999999999999954 34
Q ss_pred HHHHHhh-ccccCCchhHHHHHHHHhhCCCc-------HHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEE
Q 014936 272 VERMKKY-FDILGDPATFIQAAVPSILQQPD-------EVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVML 343 (415)
Q Consensus 272 ~~~~~~~-~~~~~~~~~~~~~a~~~~l~~~~-------~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~ 343 (415)
....... .+....+++..|.|.+.++.... ..+..++.+.++++|+.+.+.|+++ |+. +..|++++|+|+
T Consensus 264 ~~~~~~vh~~~~~~~~Tp~q~A~a~a~~~~~~~~~p~~~y~~~~~~~~y~~krdil~k~L~~l-g~~-v~~p~gayyl~a 341 (420)
T KOG0257|consen 264 YSALFPVHQNFVFTCPTPIQEASAAAFALELACLQPGGSYFITELVKEYKEKRDILAKALEEL-GLK-VTGPEGAYYLWA 341 (420)
T ss_pred hhhHHHHhhccccccCcHHHHHHHHHHhhhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHhc-CCc-cccCCCceEEEE
Confidence 5555444 34446677778877777765432 1344559999999999999999999 999 669999999999
Q ss_pred ecCcccc----C---CCCCHHHHHHHHHhhcCeEEEcCCCCCCC-------CeEEEEeeCChhhHHHHHHHHH
Q 014936 344 KLNLSLL----D---DIIDDIDFCFKLAKEESVIILPGTAVGLK-------NWLRVTFAVDPYSLEECLDRIK 402 (415)
Q Consensus 344 ~l~~~~~----~---~~~~~~~~~~~ll~~~gi~v~~g~~~~~~-------~~iRi~~~~~~~~l~~~l~~l~ 402 (415)
+++..+. + ...++-.+...++++.|+.+.|++.|+.+ +.+|+++..+++.++.++++|+
T Consensus 342 dfs~~~~~~~~~~~~~~~~d~~~~~wl~~~~Gv~~IP~saF~s~~~~~~~~~~~r~~~~k~~~~L~~a~e~l~ 414 (420)
T KOG0257|consen 342 DFSLAKSWPFFEEILEKPDDFKFVRWLIKEGGVVVIPPSAFGSREHIKVAERLVRFCFCKADETLRKAIERLK 414 (420)
T ss_pred eccccccCCcchhhccCCCceeeehhhhccCcEEEeCchhcCCchhhHHHHHHHHHHHHhhHHHHHHHHHHHh
Confidence 9972111 1 11246678899999999999999999874 3567777778889999998887
No 31
>PRK05957 aspartate aminotransferase; Provisional
Probab=100.00 E-value=1.7e-50 Score=381.72 Aligned_cols=356 Identities=24% Similarity=0.371 Sum_probs=302.4
Q ss_pred cceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCC-CCcEEEeCChHHHH
Q 014936 35 KKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLT-PNDVFVTSGCTQAI 113 (415)
Q Consensus 35 ~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~-~~~i~i~~g~~~al 113 (415)
.++++|+.|.|+ +++++.+.+++.+.+.......|++..|.+++|+++++++++.+|+.++ +++|++|+|+++++
T Consensus 27 ~~~~~l~~g~~~----~~~~~~~~~a~~~~~~~~~~~~Y~~~~G~~~lr~~~~~~l~~~~g~~~~~~~~i~~t~G~~~~l 102 (389)
T PRK05957 27 PGTISLGQGVVS----YPPPPEAIEALNNFLANPENHKYQAVQGIPPLLEAITQKLQQDNGIELNNEQAIVVTAGSNMAF 102 (389)
T ss_pred CCeEEccCCCCC----CCCCHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEEeCChHHHH
Confidence 467999999975 6678889999998876544468999899999999999999988887777 78999999999999
Q ss_pred HHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHH
Q 014936 114 DVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQ 193 (415)
Q Consensus 114 ~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~ 193 (415)
..++.+++++||+|++++|+|..+...++..|++++.++.+ .++.+|+++++++++++++++++++|+||||.++|.+
T Consensus 103 ~~~~~~~~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~~klv~~~~p~NPtG~~~~~~ 180 (389)
T PRK05957 103 MNAILAITDPGDEIILNTPYYFNHEMAITMAGCQPILVPTD--DNYQLQPEAIEQAITPKTRAIVTISPNNPTGVVYPEA 180 (389)
T ss_pred HHHHHHhcCCCCEEEEeCCCCcCHHHHHHhcCCEEEEeecC--CCCCcCHHHHHHhcCcCceEEEEeCCCCCCCcCcCHH
Confidence 99999999999999999999999988889999999999874 4567999999999988899999999999999999999
Q ss_pred HHHHHHHHHhhcCcEEEEccccCCcccCCCCccccccc-CCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHH
Q 014936 194 HLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVF-GSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVV 272 (415)
Q Consensus 194 ~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~-~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~ 272 (415)
++++|+++|+++|+++|+||+|.++.+++....+...+ +...++|+++||||.|+++|+|+||+++++ +++
T Consensus 181 ~~~~i~~~a~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~~~~--------~~~ 252 (389)
T PRK05957 181 LLRAVNQICAEHGIYHISDEAYEYFTYDGVKHFSPGSIPGSGNHTISLYSLSKAYGFASWRIGYMVIPI--------HLL 252 (389)
T ss_pred HHHHHHHHHHHcCcEEEEeccchhccCCCCCccChhhCCCccCcEEEEecchhhccCccceeEEEecCH--------HHH
Confidence 99999999999999999999999998865433333333 444689999999999999999999999865 688
Q ss_pred HHHHhhcc-ccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCccccC
Q 014936 273 ERMKKYFD-ILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLD 351 (415)
Q Consensus 273 ~~~~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~~ 351 (415)
+++..... ...+++.+.|.++..+|++. ..++++..+.++++++.+.+.|++++++..+..|.+|+|+|++++..
T Consensus 253 ~~~~~~~~~~~~~~~~~~q~~~~~~l~~~-~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~~gg~~~~~~~~~~--- 328 (389)
T PRK05957 253 EAIKKIQDTILICPPVVSQYAALGALQVG-KSYCQQHLPEIAQVRQILLKSLGQLQDRCTLHPANGAFYCFLKVNTD--- 328 (389)
T ss_pred HHHHHHHhhcccCCCcHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHHHhcCCCccccCCCeeEEEEEeCCCC---
Confidence 88877643 33566778999998898753 36788888899999999999999886642255788899999998642
Q ss_pred CCCCHHHHHHHHHhhcCeEEEcCCCCCC--CCeEEEEee-CChhhHHHHHHHHHHHHHHHHH
Q 014936 352 DIIDDIDFCFKLAKEESVIILPGTAVGL--KNWLRVTFA-VDPYSLEECLDRIKSFYQRHAK 410 (415)
Q Consensus 352 ~~~~~~~~~~~ll~~~gi~v~~g~~~~~--~~~iRi~~~-~~~~~l~~~l~~l~~~~~~~~~ 410 (415)
.++.+++..+++++||.+.||+.|+. ++++||+++ .+++++++++++|.+.++++.+
T Consensus 329 --~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRis~~~~~~~~l~~~~~~l~~~~~~~~~ 388 (389)
T PRK05957 329 --LNDFELVKQLIREYRVAVIPGTTFGMKNGCYLRIAYGALQKATAKEGIERLVQGLKTIVQ 388 (389)
T ss_pred --CChHHHHHHHHHHCCEEEccchhhCCCCCCEEEEEEecCCHHHHHHHHHHHHHHHHhhhc
Confidence 25778888888788999999998875 469999996 5789999999999999887543
No 32
>PRK07324 transaminase; Validated
Probab=100.00 E-value=5e-51 Score=382.71 Aligned_cols=363 Identities=23% Similarity=0.402 Sum_probs=305.0
Q ss_pred HHHHHHHhhhcccccccCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCC
Q 014936 17 IKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPY 96 (415)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~ 96 (415)
+.+.++......+....+.++++|+.|+|+ ++.++.+ +++.+++....+ .|++..|.++||++||+++.
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~----~~~~~~~-~~~~~~~~~~~~-~Y~~~~G~~~lr~~ia~~~~----- 76 (373)
T PRK07324 8 VEEWLNVYEKSATYDIAESCIDSLTLEELL----ALAGKNP-EAFYQELGQKKL-TYGWIEGSPEFKEAVASLYQ----- 76 (373)
T ss_pred HHHHHHHhhccCccccccCCCCCCcHHHHH----hccCcch-HHHHHHHhcCCc-cCCCCCCCHHHHHHHHHHhc-----
Confidence 344443333333333558899999999975 4555666 777777765444 89999999999999999984
Q ss_pred CCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceE
Q 014936 97 KLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVA 176 (415)
Q Consensus 97 ~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 176 (415)
++++++|++|+|+++++.+++.+++++||+|+++.|+|..+...++..|.+++.++++++++|.+|++++++.+++++++
T Consensus 77 ~~~~~~vi~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~d~~~l~~~~~~~~kl 156 (373)
T PRK07324 77 NVKPENILQTNGATGANFLVLYALVEPGDHVISVYPTYQQLYDIPESLGAEVDYWQLKEENGWLPDLDELRRLVRPNTKL 156 (373)
T ss_pred CCChhhEEEcCChHHHHHHHHHHhCCCCCEEEEcCCCchhHHHHHHHcCCEEEEEecccccCCCCCHHHHHHhCCCCCcE
Confidence 36789999999999999999999999999999999999999999999999999999877777889999999998888999
Q ss_pred EEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEE
Q 014936 177 LVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGW 256 (415)
Q Consensus 177 v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~ 256 (415)
+++++|+||||.+++.+++++|+++|+++|+++|+||+|.++.+++. ..++... .+++|+++||||.|+++|+|+||
T Consensus 157 i~i~~p~NPtG~~~~~~~l~~i~~~a~~~~~~ii~De~y~~l~~~~~-~~s~~~~--~~~~I~~~s~SK~~~~~G~RiG~ 233 (373)
T PRK07324 157 ICINNANNPTGALMDRAYLEEIVEIARSVDAYVLSDEVYRPLDEDGS-TPSIADL--YEKGISTNSMSKTYSLPGIRVGW 233 (373)
T ss_pred EEEeCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEccccccccCCC-CCChhhc--cCCEEEEecchhhcCCccceeEE
Confidence 99999999999999999999999999999999999999999887643 2233322 35789999999999999999999
Q ss_pred EEeeCCCCCCChHHHHHHHHhhcc-ccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCC
Q 014936 257 FVTTDPCGMFRKPKVVERMKKYFD-ILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKP 335 (415)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p 335 (415)
+++++ ++++.++.... .+.+.+.++|.++..+|+. .+.++++.++.++++++.+.+.|++.+++. +..|
T Consensus 234 i~~~~--------~li~~~~~~~~~~~~~~~~~~q~~a~~~l~~-~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~-~~~p 303 (373)
T PRK07324 234 IAANE--------EVIDILRKYRDYTMICAGVFDDMLASLALEH-RDAILERNRKIVRTNLAILDEWVAKEPRVS-YVKP 303 (373)
T ss_pred EecCH--------HHHHHHHHHhCcEEecCChHHHHHHHHHHcC-HHHHHHHHHHHHHHHHHHHHHHHhcCCCce-EECC
Confidence 99854 68888877753 3456778889888888864 357788889999999999999999877777 4588
Q ss_pred CCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEeeCChhhHHHHHHHHHHHHHHH
Q 014936 336 EGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFAVDPYSLEECLDRIKSFYQRH 408 (415)
Q Consensus 336 ~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~~~l~~~l~~l~~~~~~~ 408 (415)
.+|+++|+.++.. .++.+++.++++++||.+.||+.|+.++++||+++.+++.+++++++|+++++++
T Consensus 304 ~gg~~~~i~~~~~-----~~~~~~~~~ll~~~gv~v~pg~~F~~~~~iRis~~~~~~~l~~~l~rl~~~l~~~ 371 (373)
T PRK07324 304 KAVSTSFVKLDVD-----MPSEDFCLKLLKETGVLLVPGNRFDLEGHVRIGYCCDTETLKKGLKKLSEFLREF 371 (373)
T ss_pred CceEEEEEEeCCC-----CCHHHHHHHHHHhcCEEEECccccCCCCeEEEEecCCHHHHHHHHHHHHHHHHhc
Confidence 9999888888642 2577899998888999999999999889999999988999999999999998753
No 33
>PRK09265 aminotransferase AlaT; Validated
Probab=100.00 E-value=1.8e-50 Score=383.75 Aligned_cols=370 Identities=26% Similarity=0.435 Sum_probs=298.8
Q ss_pred ccCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHH
Q 014936 32 KNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQ 111 (415)
Q Consensus 32 ~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~ 111 (415)
..++++++|+.|+|... ++++++.+.+++.+.+.. ...|+++.|.++||+++|+++.+....++++++|++|+|+++
T Consensus 30 ~~~~~~i~l~~g~p~~~-~~~~~~~i~~~~~~~~~~--~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~i~~t~G~~~ 106 (404)
T PRK09265 30 EEGHKILKLNIGNPAPF-GFEAPDEILRDVIRNLPT--AQGYSDSKGLFSARKAIMQYYQQKGIPDVDVDDIYIGNGVSE 106 (404)
T ss_pred HcCCCeEEecCCCCCcC-CCCCCHHHHHHHHHHhhc--CCCCCCCCCcHHHHHHHHHHHhccCCCCCCcccEEEeCChHH
Confidence 45779999999998743 366788888888876653 458999999999999999999864444789999999999999
Q ss_pred HHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCC
Q 014936 112 AIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYS 191 (415)
Q Consensus 112 al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~ 191 (415)
++..++.+++++||+|++++|+|..+...++..|.+++.++.+.++++.+|++++++.++++++++++++|+||||.+++
T Consensus 107 ~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~v~~~~~~~~~~~~d~~~l~~~~~~~~~~v~l~~P~NPtG~~~~ 186 (404)
T PRK09265 107 LIVMAMQALLNNGDEVLVPAPDYPLWTAAVSLSGGKPVHYLCDEEAGWFPDLDDIRSKITPRTKAIVIINPNNPTGAVYS 186 (404)
T ss_pred HHHHHHHHhCCCCCEEEEeCCCCcChHHHHHHcCCEEEEEecccccCCCCCHHHHHHhccccceEEEEECCCCCCCcCCC
Confidence 99999999999999999999999999999999999998888765556789999999999888999999999999999999
Q ss_pred HHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHH
Q 014936 192 YQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKV 271 (415)
Q Consensus 192 ~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~ 271 (415)
.+++++|+++|+++|+++|+||+|.++.+++....++..+..+.++++++||||.|+++|+|+||++++.+.... ..+
T Consensus 187 ~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pGlRiG~~v~~~~~~~~--~~~ 264 (404)
T PRK09265 187 KELLEEIVEIARQHNLIIFADEIYDKILYDGAVHISIASLAPDLLCVTFNGLSKAYRVAGFRVGWMVLSGPKKHA--KGY 264 (404)
T ss_pred HHHHHHHHHHHHHCCCEEEEehhhhhccCCCCCcCCHHHcCCCceEEEEecchhhccCcccceEEEEEeCchHHH--HHH
Confidence 999999999999999999999999999887655555555555557899999999999999999999975321100 124
Q ss_pred HHHHHhhccccCCchhHHHHHHHHhhCCCcH-HHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCcccc
Q 014936 272 VERMKKYFDILGDPATFIQAAVPSILQQPDE-VFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLL 350 (415)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~-~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~ 350 (415)
++.+........+++.++|.++..+|..... ..+.+..+++.++++.+.+.|++++++. +..|.+|+|+|++++....
T Consensus 265 ~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~r~~~~~~L~~~~~~~-~~~p~~g~~l~~~~~~~~~ 343 (404)
T PRK09265 265 IEGLDMLASMRLCANVPAQHAIQTALGGYQSINELILPGGRLYEQRDRAWELLNAIPGVS-CVKPKGALYAFPKLDPKVY 343 (404)
T ss_pred HHHHHHHhccccCCCcHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHhcCCCCc-ccCCCcceEEEEEeccccc
Confidence 4444333233456788899999999864321 1122223567788999999999887877 5589999999999874211
Q ss_pred CCCCCHHHHHHHHHhhcCeEEEcCCCCCC--CCeEEEEeeCChhhHHHHHHHHHHHHHHH
Q 014936 351 DDIIDDIDFCFKLAKEESVIILPGTAVGL--KNWLRVTFAVDPYSLEECLDRIKSFYQRH 408 (415)
Q Consensus 351 ~~~~~~~~~~~~ll~~~gi~v~~g~~~~~--~~~iRi~~~~~~~~l~~~l~~l~~~~~~~ 408 (415)
+..++.+++.+++.++||.+.||..|+. ++++|++++.+++++++++++|+++++++
T Consensus 344 -~~~~~~~~~~~~l~~~gv~v~pg~~F~~~~~~~~Ri~~~~~~e~l~~~l~rl~~~l~~~ 402 (404)
T PRK09265 344 -PIHDDEQFVLDLLLQEKVLLVQGTGFNWPEPDHFRIVTLPRVDDLEEAIGRIGRFLSGY 402 (404)
T ss_pred -CCCCHHHHHHHHHHhCCEEEECchhhCCCCCCeEEEEeCCCHHHHHHHHHHHHHHHHHh
Confidence 1123556677788889999999999863 68999999888999999999999988754
No 34
>PRK08363 alanine aminotransferase; Validated
Probab=100.00 E-value=1.2e-50 Score=384.45 Aligned_cols=362 Identities=30% Similarity=0.513 Sum_probs=302.3
Q ss_pred cCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHH
Q 014936 33 NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQA 112 (415)
Q Consensus 33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~a 112 (415)
.+.++++|+.|.|... ++++++.+.+++.+.+... ...|+++.|.++||+++++|+++.+|+++++++|++|+|++++
T Consensus 28 ~~~~~i~l~~g~p~~~-~~~p~~~~~~~~~~~~~~~-~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~a 105 (398)
T PRK08363 28 KGIKVIRLNIGDPVKF-DFQPPEHMKEAYCRAIKEG-HNYYGPSEGLPELREAIVKREKRKNGVDITPDDVRVTAAVTEA 105 (398)
T ss_pred cCCCeEEEeCCCCCcC-CCCCCHHHHHHHHHHHHcC-CCCCCCCCCcHHHHHHHHHHHHHhcCCCCChhhEEEeCCHHHH
Confidence 4679999999998532 3677899999999887653 3479888999999999999999888888999999999999999
Q ss_pred HHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCH
Q 014936 113 IDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSY 192 (415)
Q Consensus 113 l~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~ 192 (415)
+..++.+++++||+|+++.|+|..+...++..|..++.++...++++.+|++.+++.++++++++++++||||||.+++.
T Consensus 106 l~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~v~~~~~~~~~~~~d~~~l~~~~~~~~~~v~l~~p~NPtG~~~~~ 185 (398)
T PRK08363 106 LQLIFGALLDPGDEILIPGPSYPPYTGLVKFYGGVPVEYRTIEEEGWQPDIDDIRKKITEKTKAIAVINPNNPTGALYEK 185 (398)
T ss_pred HHHHHHHhCCCCCEEEEcCCCCcchHHHHHHcCCEEEEeccccccCCcCCHHHHHhhCCcceEEEEEECCCCCCCcCcCH
Confidence 99999999999999999999999999999999998887742233566789999999998889999999999999999999
Q ss_pred HHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHH
Q 014936 193 QHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVV 272 (415)
Q Consensus 193 ~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~ 272 (415)
+++++|+++|+++|+++|+||+|.++.+.+. ..++..+....++++++||||.|+++|+|+||+++.++. +++
T Consensus 186 ~~~~~l~~~a~~~~~~li~Deay~~~~~~~~-~~~~~~~~~~~~vi~~~SfSK~~~~~GlRiG~~~~~~~~------~~~ 258 (398)
T PRK08363 186 KTLKEILDIAGEHDLPVISDEIYDLMTYEGK-HVSPGSLTKDVPVIVMNGLSKVYFATGWRLGYIYFVDPE------GKL 258 (398)
T ss_pred HHHHHHHHHHHHcCeEEEEhhhhhhhccCCc-ccCHHHcCcCCcEEEEecchhccCCccceEEEEEEeCcH------HHH
Confidence 9999999999999999999999999887653 234445555567999999999999999999999972211 344
Q ss_pred HHHHhh----ccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCcc
Q 014936 273 ERMKKY----FDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLS 348 (415)
Q Consensus 273 ~~~~~~----~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~ 348 (415)
+.+... .....+.+.+.|.++..+|.. .++++++.+++++++++.+.+.|++++++. +..|.+|+|+|++++..
T Consensus 259 ~~l~~~~~~~~~~~~~~s~~~q~~~~~~l~~-~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~-~~~p~g~~~~~~~l~~~ 336 (398)
T PRK08363 259 AEVREAIDKLARIRLCPNTPAQFAAIAGLTG-PMDYLEEYMKKLKERRDYIYKRLNEIPGIS-TTKPQGAFYIFPRIEEG 336 (398)
T ss_pred HHHHHHHHHHhcccccCChHHHHHHHHHHhC-ChHHHHHHHHHHHHHHHHHHHHHhcCCCCE-ecCCCeEEEEEEEeccC
Confidence 444332 122356788899999999864 357889999999999999999999887777 55788999999888641
Q ss_pred ccCCCCCHHHHHHHHHhhcCeEEEcCCCCCC--CCeEEEEeeCChhhHHHHHHHHHHHHHHH
Q 014936 349 LLDDIIDDIDFCFKLAKEESVIILPGTAVGL--KNWLRVTFAVDPYSLEECLDRIKSFYQRH 408 (415)
Q Consensus 349 ~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~--~~~iRi~~~~~~~~l~~~l~~l~~~~~~~ 408 (415)
. ..++.+++..+++++||.+.||..|+. ++++||+++.+++++++++++|++++++.
T Consensus 337 ~---~~~~~~~~~~~l~~~gV~v~~g~~f~~~~~~~iRis~~~~~~~l~~~l~~l~~~~~~~ 395 (398)
T PRK08363 337 P---WKDDKEFVLDVLHEAHVLFVHGSGFGEYGAGHFRLVFLPPVEILEEAMDRFEEFMRER 395 (398)
T ss_pred C---CCCHHHHHHHHHHhCCEEEeCchhhCCCCCCeEEEEecCCHHHHHHHHHHHHHHHHHh
Confidence 1 114567777887889999999998875 47999999888899999999999988764
No 35
>PRK07682 hypothetical protein; Validated
Probab=100.00 E-value=5.7e-51 Score=384.47 Aligned_cols=352 Identities=25% Similarity=0.433 Sum_probs=300.9
Q ss_pred cceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCC-cEEEeCChHHHH
Q 014936 35 KKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPN-DVFVTSGCTQAI 113 (415)
Q Consensus 35 ~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~-~i~i~~g~~~al 113 (415)
+++++|+.|+|+ +++++.+.+++.+.+.. ....|++..|.+++|+++|+++++.+|..++++ +|++|+|+++++
T Consensus 20 ~~~i~l~~~~~~----~~~~~~~~~~~~~~~~~-~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~~i~~t~G~~~al 94 (378)
T PRK07682 20 EGVISLGVGEPD----FVTPWNVREASIRSLEQ-GYTSYTANAGLLELRQEIAKYLKKRFAVSYDPNDEIIVTVGASQAL 94 (378)
T ss_pred CCeEEeCCCCCC----CCCCHHHHHHHHHHHhc-CCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEeCChHHHH
Confidence 468999999976 45567788888887764 345798889999999999999998888888886 899999999999
Q ss_pred HHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHH
Q 014936 114 DVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQ 193 (415)
Q Consensus 114 ~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~ 193 (415)
.+++.+++++||+|++++|+|+.+...++..|.++..++.+.++++.+|++++++++.++++++++++|+||||.++|.+
T Consensus 95 ~~~~~~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~~~~p~NPtG~~~s~~ 174 (378)
T PRK07682 95 DVAMRAIINPGDEVLIVEPSFVSYAPLVTLAGGVPVPVATTLENEFKVQPAQIEAAITAKTKAILLCSPNNPTGAVLNKS 174 (378)
T ss_pred HHHHHHhCCCCCEEEEeCCCchhhHHHHHHcCCEEEEeecCCccCCCCCHHHHHhhcCcccEEEEEECCCCCcCcCcCHH
Confidence 99999999999999999999999999999999999999876656788999999999988899999999999999999999
Q ss_pred HHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccC-CCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHH
Q 014936 194 HLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFG-STVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVV 272 (415)
Q Consensus 194 ~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~-~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~ 272 (415)
++++|+++|+++++++|+||+|..+.+++. ..++..+. ..+++++++||||.|+++|+|+||+++++ +++
T Consensus 175 ~~~~l~~~~~~~~~~ii~De~y~~~~~~~~-~~~~~~~~~~~~~~i~~~S~SK~~~~~GlR~G~~~~~~--------~~i 245 (378)
T PRK07682 175 ELEEIAVIVEKHDLIVLSDEIYAELTYDEA-YTSFASIKGMRERTILISGFSKGFAMTGWRLGFIAAPV--------YFS 245 (378)
T ss_pred HHHHHHHHHHHcCcEEEEehhhhhcccCCC-CCChhhcccccCCEEEEecCcccccChhhhhhhhhcCH--------HHH
Confidence 999999999999999999999999998753 22333332 24689999999999999999999999865 678
Q ss_pred HHHHhhcc-ccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCccccC
Q 014936 273 ERMKKYFD-ILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLD 351 (415)
Q Consensus 273 ~~~~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~~ 351 (415)
+.+..... ...+++.+.|.++..+|++. +.++++.++.++++++.+.+.|+++ ++. +..|.+|+|+|+.++...
T Consensus 246 ~~l~~~~~~~~~~~~~~~q~a~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~L~~~-~~~-~~~p~g~~~~~~~~~~~~-- 320 (378)
T PRK07682 246 EAMLKIHQYSMMCAPTMAQFAALEALRAG-NDDVIRMRDSYRKRRNFFVTSFNEI-GLT-CHVPGGAFYAFPSISSTG-- 320 (378)
T ss_pred HHHHHHHHhhccCCCHHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHHHHC-CCc-cCCCCeeEEEEEeccCCC--
Confidence 87766543 23567889999999999764 3568888999999999999999988 777 557889999999875311
Q ss_pred CCCCHHHHHHHHHhhcCeEEEcCCCCCC--CCeEEEEeeCChhhHHHHHHHHHHHHHH
Q 014936 352 DIIDDIDFCFKLAKEESVIILPGTAVGL--KNWLRVTFAVDPYSLEECLDRIKSFYQR 407 (415)
Q Consensus 352 ~~~~~~~~~~~ll~~~gi~v~~g~~~~~--~~~iRi~~~~~~~~l~~~l~~l~~~~~~ 407 (415)
.++.++...+++++||.+.||..|+. ++++||+++.+++++++++++|++++++
T Consensus 321 --~~~~~~~~~ll~~~gv~v~pg~~f~~~~~~~iRis~~~~~~~l~~~l~~l~~~l~~ 376 (378)
T PRK07682 321 --LSSEEFAEQLLLEEKVAVVPGSVFGESGEGFIRCSYATSLEQLQEAMKRMKRFVEN 376 (378)
T ss_pred --CCHHHHHHHHHHhCCEEEcCchhhCcCCCCeEEEEeCCCHHHHHHHHHHHHHHHhh
Confidence 25678888887788999999998875 5899999988899999999999998764
No 36
>PLN02450 1-aminocyclopropane-1-carboxylate synthase
Probab=100.00 E-value=8.4e-51 Score=389.63 Aligned_cols=368 Identities=23% Similarity=0.358 Sum_probs=297.7
Q ss_pred cccccccCcceeEecccCCCCCCCCCCcHHHHHHHHHHHh-----c------CCCCCCCCCCCcHHHHHHHHHHHhhhCC
Q 014936 27 SVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALL-----S------EKFNGYAPTAGLPLTRRAIAEYLSRDLP 95 (415)
Q Consensus 27 ~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~-----~------~~~~~y~~~~g~~~lr~~ia~~~~~~~~ 95 (415)
.++...++.++|+|+.+.+. ++ .+.+.+.+++... . ..+..|+++.|.++||++||+|++++++
T Consensus 30 ~y~~~~~p~g~i~L~~~En~----l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Y~~~~G~~~LR~aiA~~l~~~~~ 104 (468)
T PLN02450 30 PYDEIKNPSGIIQMGLAENQ----LS-FDLIESWLAKNPDAAGLKRNGQSIFRELALFQDYHGLPAFKNALAEFMSEIRG 104 (468)
T ss_pred CCCcccCCCeeEEeehhHhH----hh-HHHHHHHHHhCchhhhcccccccchhhhhcCCCCCChHHHHHHHHHHHHHhhC
Confidence 46665667789999999853 22 2555555554321 0 1345699989999999999999998777
Q ss_pred C--CCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHH-hCCCeEEEeeccCCCCCCCChhHHHhhcCC
Q 014936 96 Y--KLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAA-FRHIEVRHFDLLPDKGWEVDLDDIESLADQ 172 (415)
Q Consensus 96 ~--~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~ 172 (415)
. .+++++|++|+|+++++..++.+++++||.|++++|+|..+...+. ..|++++.++.+.++++.+|++.+++++++
T Consensus 105 ~~~~v~~~~Iiit~Ga~~al~~l~~~l~~pGd~Vlv~~P~Y~~~~~~~~~~~g~~~v~v~~~~~~~~~~~~~~le~~~~~ 184 (468)
T PLN02450 105 NKVTFDPNKLVLTAGATSANETLMFCLAEPGDAFLLPTPYYPGFDRDLKWRTGVEIVPIHCSSSNGFQITESALEEAYQQ 184 (468)
T ss_pred CCCCcChHHeEEccChHHHHHHHHHHhCCCCCEEEECCCCCCchHHHHhhcCCcEEEEEecCCccCCcCCHHHHHHHHHH
Confidence 4 4789999999999999999999999999999999999999988877 589999999987667788899999887753
Q ss_pred ------CceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCccccccc---------CCCCCe
Q 014936 173 ------NTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVF---------GSTVPI 237 (415)
Q Consensus 173 ------~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~---------~~~~~~ 237 (415)
++++++++|||||||.++|.+++++|+++|+++|+++|+||+|+.+.|++..+.++... +..+++
T Consensus 185 ~~~~~~~~k~v~l~nP~NPTG~~~s~e~l~~ll~~a~~~~~~iI~DE~Y~~~~f~~~~~~s~l~~~~~~~~~~~~~~~~v 264 (468)
T PLN02450 185 AQKLNLKVKGVLITNPSNPLGTTTTRTELNLLVDFITAKNIHLISDEIYSGTVFDSPGFVSVMEVLKDRKLENTDVSNRV 264 (468)
T ss_pred HHhcCCCeeEEEEecCCCCCCcccCHHHHHHHHHHHHHCCcEEEEEccccccccCCCCcccHHHHhhhcccccCCCCCcE
Confidence 67899999999999999999999999999999999999999999988876444332221 134689
Q ss_pred EEEccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhhccccCCchhHHHHHHHHhhCCCc--HHHHHHHHHHHHHH
Q 014936 238 LTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQAAVPSILQQPD--EVFFKKTLNLLKQS 315 (415)
Q Consensus 238 i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~--~~~~~~~~~~~~~~ 315 (415)
++++||||.|+++|+|+||++++++ .+.+.+..... ....+.++|.++..+|++.. ..++++.+++++++
T Consensus 265 i~l~S~SK~~~l~GlRiG~li~~~~-------~l~~~~~~~~~-~~~~s~~~Q~a~~~~L~~~~~~~~~l~~~~~~l~~r 336 (468)
T PLN02450 265 HIVYSLSKDLGLPGFRVGAIYSNDE-------MVVSAATKMSS-FGLVSSQTQYLLSALLSDKKFTKNYLEENQKRLKQR 336 (468)
T ss_pred EEEEeccccCCCCCccEEEEEECCH-------HHHHHHHHHhh-cCCCCHHHHHHHHHHhCCchhHHHHHHHHHHHHHHH
Confidence 9999999999999999999999751 24555554432 34568899999999998753 24788899999999
Q ss_pred HHHHHHHhhcCCCCcCCCCCCCceEEEEecCccccC-CCCCHHHHHHHHHhhcCeEEEcCCCCCC--CCeEEEEee-CCh
Q 014936 316 VDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLD-DIIDDIDFCFKLAKEESVIILPGTAVGL--KNWLRVTFA-VDP 391 (415)
Q Consensus 316 ~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~~-~~~~~~~~~~~ll~~~gi~v~~g~~~~~--~~~iRi~~~-~~~ 391 (415)
++.+.+.|+++ ++. +..|.+|+|+|++++..... ......+++..+++++||.+.||+.|+. ++|+||+++ .++
T Consensus 337 r~~l~~~L~~~-gi~-~~~~~~g~flwi~l~~~~~~~~~~~~~~l~~~ll~~~gV~v~PG~~f~~~~~g~~Rl~f~~~~~ 414 (468)
T PLN02450 337 QKKLVSGLEAA-GIK-CLKSNAGLFCWVDMRHLLKSNTFEAEMELWKKIVYEVKLNISPGSSCHCTEPGWFRVCFANMSE 414 (468)
T ss_pred HHHHHHHHHHc-CCc-ccCCCceEEEEEEchHhcCcCCchHHHHHHHHHHHhCCEEEeCccccCCCCCCEEEEEecCCCH
Confidence 99999999998 777 55788999999998642111 1122356778888889999999998875 689999998 489
Q ss_pred hhHHHHHHHHHHHHHHHH
Q 014936 392 YSLEECLDRIKSFYQRHA 409 (415)
Q Consensus 392 ~~l~~~l~~l~~~~~~~~ 409 (415)
+++++++++|++++.+..
T Consensus 415 ~~l~~~l~ri~~~l~~~~ 432 (468)
T PLN02450 415 ETLDLAMKRLKSFVESDS 432 (468)
T ss_pred HHHHHHHHHHHHHHHhcc
Confidence 999999999999987655
No 37
>PRK06290 aspartate aminotransferase; Provisional
Probab=100.00 E-value=2.9e-50 Score=380.69 Aligned_cols=355 Identities=22% Similarity=0.336 Sum_probs=297.5
Q ss_pred CcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCC-CCCC-cEEEeCChHH
Q 014936 34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYK-LTPN-DVFVTSGCTQ 111 (415)
Q Consensus 34 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~-~~~~-~i~i~~g~~~ 111 (415)
+.++++|+.|+|+ +++++.+++++.+.+.......|++ .|.++||+++|+|+++.+|.. ++++ +|++|+|+++
T Consensus 43 ~~~~i~L~~g~p~----~~~~~~~~~~l~~~~~~~~~~~Y~~-~G~~~lr~aia~~~~~~~g~~~~~~~~~I~it~Gs~~ 117 (410)
T PRK06290 43 DMELIDMGVGEPD----EMADESVVEVLCEEAKKPENRGYAD-NGIQEFKEAAARYMEKVFGVKDIDPVTEVIHSIGSKP 117 (410)
T ss_pred CCCeEEcCCCCCC----CCCCHHHHHHHHHHHhCCCCCCCCC-CCcHHHHHHHHHHHHHHcCCCcCCCcceEEEccCHHH
Confidence 5679999999975 5667889999888765444457886 899999999999999888887 8886 7999999999
Q ss_pred HHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCC
Q 014936 112 AIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYS 191 (415)
Q Consensus 112 al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~ 191 (415)
++..++.+++++||.|+++.|+|+.+...++..|+++..++.+.++++.+|++++++.+.++++++++++||||||.++|
T Consensus 118 al~~~~~~~~~~gd~Vlv~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~d~~~l~~~~~~~~k~i~l~nP~NPTG~v~s 197 (410)
T PRK06290 118 ALAMLPSCFINPGDVTLMTVPGYPVTGTHTKYYGGEVYNLPLLEENNFLPDLDSIPKDIKEKAKLLYLNYPNNPTGAVAT 197 (410)
T ss_pred HHHHHHHHhCCCCCEEEEeCCCCccHHHHHHHcCCEEEEEecCCCcCCcCCHHHHHHhhcccceEEEEECCCCCCCcCCC
Confidence 99999999999999999999999999999999999999999977667888999999988878999999999999999999
Q ss_pred HHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCC-CCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHH
Q 014936 192 YQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS-TVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPK 270 (415)
Q Consensus 192 ~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~ 270 (415)
.+++++|+++|+++|++||+||+|.++.+++. ..++..+.. .+++|+++||||.|+++|+|+||+++++ +
T Consensus 198 ~e~l~~l~~la~~~~~~iI~DEaY~~~~~~~~-~~s~~~~~~~~~~~I~i~SfSK~~g~~GlRiG~ii~~~--------~ 268 (410)
T PRK06290 198 KEFYEEVVDFAKENNIIVVQDAAYAALTFDGK-PLSFLSVPGAKEVGVEIHSLSKAYNMTGWRLAFVVGNE--------L 268 (410)
T ss_pred HHHHHHHHHHHHHcCeEEEEecchhhceeCCC-CcChhcCCCccccEEEEeechhhcCCchhheEeEEeCH--------H
Confidence 99999999999999999999999999887653 233333332 3568999999999999999999999865 6
Q ss_pred HHHHHHhhcc-ccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCccc
Q 014936 271 VVERMKKYFD-ILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSL 349 (415)
Q Consensus 271 ~~~~~~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~ 349 (415)
+++.+..... ...+.+.++|.++..+|++. .++++.+++++++++.+.+.|+++ ++. +..|++|+|+|++++...
T Consensus 269 l~~~l~~~~~~~~~~~~~~~q~aa~~~l~~~--~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~p~g~f~l~v~lp~~~ 344 (410)
T PRK06290 269 IVKAFATVKDNNDSGQFIAIQKAGIYALDHP--EITEKIREKYSRRLDKLVKILNEV-GFK-AEMPGGTFYLYVKAPKGT 344 (410)
T ss_pred HHHHHHHHHhccccCCcHHHHHHHHHHhhCc--HHHHHHHHHHHHHHHHHHHHHHhC-CCe-ecCCCeeeEEEEECCCcc
Confidence 7777776643 23455668899999999763 678889999999999999999988 777 547889999999987532
Q ss_pred cCC--CCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEee---CChhhHHHHHHHHHHHHHHH
Q 014936 350 LDD--IIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFA---VDPYSLEECLDRIKSFYQRH 408 (415)
Q Consensus 350 ~~~--~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~---~~~~~l~~~l~~l~~~~~~~ 408 (415)
..+ ..+..++...++++.++.+.||..|+ +++||+++ .++++.++.++.|++.+.++
T Consensus 345 ~~~~~~~~~~~~~~~Ll~~~~v~~~p~~~~~--~~lRi~~~~~~~~~~~~~~~~~~l~~~~~~~ 406 (410)
T PRK06290 345 KSGIKFENAEEFSQYLIKEKLISTVPWDDAG--HFLRFSVTFEAKDEEEEDRILEEIKRRLSDV 406 (410)
T ss_pred ccCCCCCCHHHHHHHHHHhCCEEEECCcccc--CeEEEEEEcccccccchhHHHHHHHHHHhhc
Confidence 111 12577888999888788888988664 79999997 46788899999998887653
No 38
>PLN02376 1-aminocyclopropane-1-carboxylate synthase
Probab=100.00 E-value=1.8e-50 Score=388.39 Aligned_cols=379 Identities=20% Similarity=0.321 Sum_probs=299.4
Q ss_pred hHHHHHHHhhhc-ccccccCcceeEecccCCCCCCCCCCcHHHHHHHHHHHh-----------cCCCCCCCCCCCcHHHH
Q 014936 16 TIKGMLSLLMQS-VDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALL-----------SEKFNGYAPTAGLPLTR 83 (415)
Q Consensus 16 ~~~~~~~~~~~~-~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~-----------~~~~~~y~~~~g~~~lr 83 (415)
+-.+.+..+... +++..+++.+|+|+.+.+. ...+.+.+.+++... ......|+++.|.++||
T Consensus 26 ~~~~~~~~~~~~~y~~~~np~g~i~l~~aEN~-----l~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~LR 100 (496)
T PLN02376 26 EYFDGWKAYDKDPFHLSRNPHGIIQMGLAENQ-----LCLDLIKDWVKENPEASICTLEGIHQFSDIANFQDYHGLKKFR 100 (496)
T ss_pred chHHHHHHHhCCCCCcccCCCceEEeecchhh-----hhHHHHHHHHHhCchhhccccccccccchhhccCCCCCcHHHH
Confidence 344455545443 5665677789999999843 112333333333211 12335688889999999
Q ss_pred HHHHHHHhhhCC--CCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHH-hCCCeEEEeeccCCCCCC
Q 014936 84 RAIAEYLSRDLP--YKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAA-FRHIEVRHFDLLPDKGWE 160 (415)
Q Consensus 84 ~~ia~~~~~~~~--~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~-~~g~~~~~~~~~~~~~~~ 160 (415)
++||+|+++.+| +.+++++|++|+|+++++..++.++++|||.|++++|+|+.+...+. ..|++++.++.+.+++++
T Consensus 101 ~aiA~~l~~~~g~~v~v~pe~Ivit~Ga~~al~~l~~~l~~pGD~Vlv~~P~Y~~~~~~~~~~~G~~vv~v~~~~~~~~~ 180 (496)
T PLN02376 101 QAIAHFMGKARGGKVTFDPERVVMSGGATGANETIMFCLADPGDVFLIPSPYYAAFDRDLRWRTGVEIIPVPCSSSDNFK 180 (496)
T ss_pred HHHHHHHHHHhCCCCcCChhhEEEccchHHHHHHHHHHhCCCCCEEEECCCCccchHHHHHhhCCCEEEEEeCCCCccCc
Confidence 999999998877 56899999999999999999999999999999999999999998776 589999999987666788
Q ss_pred CChhHHHhhc------CCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCC-
Q 014936 161 VDLDDIESLA------DQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS- 233 (415)
Q Consensus 161 ~~~~~l~~~~------~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~- 233 (415)
++++.+++++ ..+++++++++||||||.+++.+++++|+++|+++|+++|+||+|+.+.|.+..+.++..+..
T Consensus 181 ~~~~~le~a~~~a~~~~~~~k~l~l~nP~NPTG~~~s~e~l~~L~~~a~~~~i~lI~DEiY~~~~f~~~~~~si~~l~~~ 260 (496)
T PLN02376 181 LTVDAADWAYKKAQESNKKVKGLILTNPSNPLGTMLDKDTLTNLVRFVTRKNIHLVVDEIYAATVFAGGDFVSVAEVVND 260 (496)
T ss_pred CCHHHHHHHHHHHHhcCCCeeEEEEcCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEEcCccccccCCCCcccHHHhhcc
Confidence 9999997653 236788999999999999999999999999999999999999999999888766555544411
Q ss_pred -------CCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhhccccCCchhHHHHHHHHhhCCCc--HHH
Q 014936 234 -------TVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQAAVPSILQQPD--EVF 304 (415)
Q Consensus 234 -------~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~--~~~ 304 (415)
.+++++++||||.|++||+|+||++++++ .+.+.++.... .+..+.++|.++..+|++.. +.+
T Consensus 261 ~~~~~~~~~~v~vv~S~SK~~glpGlRvG~li~~~~-------~l~~~~~~~~~-~~~vs~~~Q~a~~~~L~d~~~~~~~ 332 (496)
T PLN02376 261 VDISEVNVDLIHIVYSLSKDMGLPGFRVGIVYSFND-------SVVSCARKMSS-FGLVSSQTQLMLASMLSDDQFVDNF 332 (496)
T ss_pred ccccccCCCeEEEEEeccccCCCCcceEEEEEECCH-------HHHHHHHHHhh-cCCCCHHHHHHHHHHhCChhHHHHH
Confidence 13577899999999999999999998642 35555444333 34578899999999998743 356
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCcccc--CCCCCHHHHHHHHHhhcCeEEEcCCCCCC--C
Q 014936 305 FKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLL--DDIIDDIDFCFKLAKEESVIILPGTAVGL--K 380 (415)
Q Consensus 305 ~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~--~~~~~~~~~~~~ll~~~gi~v~~g~~~~~--~ 380 (415)
+++.+++++++++.+.+.|++. ++. +..|.+|+|+|++++.... ....+..+++..++++.||.+.||+.|+. +
T Consensus 333 l~~~r~~l~~r~~~l~~~L~~~-gi~-~~~~~aG~flwi~l~~~~~~~~~~~~e~~l~~~ll~~~gV~v~pGs~F~~~~~ 410 (496)
T PLN02376 333 LMESSRRLGIRHKVFTTGIKKA-DIA-CLTSNAGLFAWMDLRHLLRDRNSFESEIELWHIIIDKVKLNVSPGSSFRCTEP 410 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHC-CCc-ccCCCceEEEEEEchhhhccCCchhHHHHHHHHHHHcCCEEEeCccccCCCCC
Confidence 6777899999999999999987 777 4578999999999964211 11112467788888888999999999864 6
Q ss_pred CeEEEEee-CChhhHHHHHHHHHHHHHHHH
Q 014936 381 NWLRVTFA-VDPYSLEECLDRIKSFYQRHA 409 (415)
Q Consensus 381 ~~iRi~~~-~~~~~l~~~l~~l~~~~~~~~ 409 (415)
+|+||+++ .+++++++++++|++++.+..
T Consensus 411 g~~Ri~fa~~~~~~l~~al~rl~~~l~~~~ 440 (496)
T PLN02376 411 GWFRICFANMDDDTLHVALGRIQDFVSKNK 440 (496)
T ss_pred CEEEEEeeCCCHHHHHHHHHHHHHHHHHhh
Confidence 89999998 588999999999999997644
No 39
>PRK08361 aspartate aminotransferase; Provisional
Probab=100.00 E-value=1.1e-50 Score=383.72 Aligned_cols=355 Identities=26% Similarity=0.478 Sum_probs=304.4
Q ss_pred CcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHH
Q 014936 34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAI 113 (415)
Q Consensus 34 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al 113 (415)
.+++++|+.|+|. +++++.+++++++.+... ...|.+..|.++||+++|+++++.+|.++++++|++|+|+++++
T Consensus 32 ~~~~i~l~~~~~~----~~~~~~~~~~~~~~~~~~-~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al 106 (391)
T PRK08361 32 MENVISLGIGEPD----FDTPKNIKEAAKRALDEG-WTHYTPNAGIPELREAIAEYYKKFYGVDVDVDNVIVTAGAYEAT 106 (391)
T ss_pred hcCeEEcCCCCCC----CCCCHHHHHHHHHHHhcC-CCCCCCCCCcHHHHHHHHHHHHHHhCCCCCcccEEEeCChHHHH
Confidence 3568999999975 555788999998887653 45788778999999999999998888889999999999999999
Q ss_pred HHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHH
Q 014936 114 DVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQ 193 (415)
Q Consensus 114 ~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~ 193 (415)
..++.+++++||+|++++|+|..+...+...|++++.+++++++++.+|++.+++.++++++++++++|+||||.++|.+
T Consensus 107 ~~~~~~l~~~g~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~v~i~~p~NPtG~~~~~~ 186 (391)
T PRK08361 107 YLAFESLLEEGDEVIIPDPAFVCYVEDAKIAEAKPIRIPLREENEFQPDPDELLELITKRTRMIVINYPNNPTGATLDKE 186 (391)
T ss_pred HHHHHHhcCCCCEEEEcCCCCcccHHHHHHcCCEEEEEecCCccCCCCCHHHHHHhcccccEEEEEeCCCCCCCcCcCHH
Confidence 99999999999999999999999999999999999999987766788999999999988899999999999999999999
Q ss_pred HHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHH
Q 014936 194 HLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVE 273 (415)
Q Consensus 194 ~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~ 273 (415)
++++|+++|+++++++|+||+|+++.+++....++..+.. +++++++||||.|+++|+|+||+++++ ++++
T Consensus 187 ~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~-~~~i~~~s~SK~~~~~GlRiG~~~~~~--------~~~~ 257 (391)
T PRK08361 187 VAKAIADIAEDYNIYILSDEPYEHFLYEGAKHYPMIKYAP-DNTILANSFSKTFAMTGWRLGFVIAPE--------QVIK 257 (391)
T ss_pred HHHHHHHHHHHcCeEEEEEcccccceeCCCCCCCHhhcCC-CCEEEEecCchhcCCcHhhhhhhccCH--------HHHH
Confidence 9999999999999999999999998876544444444332 578999999999999999999999865 5777
Q ss_pred HHHhhcc-ccCCchhHHHHHHHHhhCCCc-HHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCccccC
Q 014936 274 RMKKYFD-ILGDPATFIQAAVPSILQQPD-EVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLD 351 (415)
Q Consensus 274 ~~~~~~~-~~~~~~~~~~~a~~~~l~~~~-~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~~ 351 (415)
.+..... ..++.+.+.|.++..+|++.. ..++++.++.++++++.+.+.|++++++. +..|.+|+|+|++++...
T Consensus 258 ~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~-~~~p~g~~~~~~~l~~~~-- 334 (391)
T PRK08361 258 DMIKLHAYIIGNVASFVQIAGIEALRSKESWKAVEEMRKEYNERRKLVLKRLKEMPHIK-VFEPKGAFYVFANIDETG-- 334 (391)
T ss_pred HHHHHHhhhccCCChHHHHHHHHHhcCCcccHHHHHHHHHHHHHHHHHHHHHHhCCCCe-ecCCCEEEEEEEECCCCC--
Confidence 7665532 345678889999999997643 35788999999999999999999987877 557889999999986421
Q ss_pred CCCCHHHHHHHHHhhcCeEEEcCCCCCC--CCeEEEEeeCChhhHHHHHHHHHHHHHH
Q 014936 352 DIIDDIDFCFKLAKEESVIILPGTAVGL--KNWLRVTFAVDPYSLEECLDRIKSFYQR 407 (415)
Q Consensus 352 ~~~~~~~~~~~ll~~~gi~v~~g~~~~~--~~~iRi~~~~~~~~l~~~l~~l~~~~~~ 407 (415)
.++.++...+++++||.+.||..|+. ++++||+++.+++++++++++|++++++
T Consensus 335 --~~~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~~~~~~l~~al~~l~~~l~~ 390 (391)
T PRK08361 335 --MSSEDFAEWLLEKARVVVIPGTAFGKAGEGYIRISYATSKEKLIEAMERMEKALEE 390 (391)
T ss_pred --CCHHHHHHHHHHhCCEEEcCchhhCCCCCCEEEEEecCCHHHHHHHHHHHHHHHhc
Confidence 25677888887778999999998875 5799999998889999999999988764
No 40
>PRK07568 aspartate aminotransferase; Provisional
Probab=100.00 E-value=7.1e-50 Score=379.86 Aligned_cols=383 Identities=27% Similarity=0.459 Sum_probs=312.0
Q ss_pred CccccCCccCCcchhhHHHHHHHhhhcccccccCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcH
Q 014936 1 MEISNGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLP 80 (415)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~ 80 (415)
|+++.+.....++ .+........ ... ..+.++++|+.|.|+ +++++.+.+++.+... ....|++..|.+
T Consensus 1 ~~~~~~~~~~~~~--~~~~~~~~~~-~~~--~~~~~~i~l~~~~~~----~~~~~~~~~a~~~~~~--~~~~Y~~~~g~~ 69 (397)
T PRK07568 1 MKISKRVLNMPAS--PIRKLVPYAD-EAK--KRGIKVYHLNIGQPD----IKTPEVFFEAIKNYDE--EVLAYSHSQGIP 69 (397)
T ss_pred CchhhHhhhCCcc--hHHHHHHHHH-HHH--hhCCCEEEecCCCCC----CCCCHHHHHHHHHHhc--CCcCcCCCCCCH
Confidence 6777776655544 4444433211 111 124678999999965 5567889998877654 345799989999
Q ss_pred HHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCC
Q 014936 81 LTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWE 160 (415)
Q Consensus 81 ~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~ 160 (415)
++|++++++++ ..+.++++++|++|+|+++++..++.+++++||+|++++|+|..+...++..|.++..++.+.++++.
T Consensus 70 ~lr~~ia~~~~-~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~g~~ 148 (397)
T PRK07568 70 ELREAFAKYYK-KWGIDVEPDEILITNGGSEAILFAMMAICDPGDEILVPEPFYANYNGFATSAGVKIVPVTTKIEEGFH 148 (397)
T ss_pred HHHHHHHHHHH-HhCCCCCcceEEEcCChHHHHHHHHHHhcCCCCEEEEecCCCccHHHHHHHcCCEEEEeecCcccCCC
Confidence 99999999998 46778899999999999999999999999999999999999999998889999999999886545544
Q ss_pred C-ChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCC-CCCeE
Q 014936 161 V-DLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS-TVPIL 238 (415)
Q Consensus 161 ~-~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~-~~~~i 238 (415)
. +++.++++++++++++++++|+||||.+++.+++++|+++|+++|+++|+||+|.++.+++....++..+.. .++++
T Consensus 149 ~~~~~~l~~~~~~~~~~v~i~~p~NPtG~~~~~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~s~~~~~~~~~~~i 228 (397)
T PRK07568 149 LPSKEEIEKLITPKTKAILISNPGNPTGVVYTKEELEMLAEIAKKHDLFLISDEVYREFVYDGLKYTSALSLEGLEDRVI 228 (397)
T ss_pred CCCHHHHHHhcCccceEEEEECCCCCCCccCCHHHHHHHHHHHHHCCcEEEEeccchhcccCCCCccChhhcCCCcCCEE
Confidence 3 579999999888999999999999999999999999999999999999999999999887654445555543 56899
Q ss_pred EEccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhhccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHH
Q 014936 239 TLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDI 318 (415)
Q Consensus 239 ~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~ 318 (415)
++.||||.|+++|+|+||+++++ +++++.+........+++.+.|.++..+|+.. +.++++.++.++++++.
T Consensus 229 ~~~S~SK~~~~~G~R~G~~~~~~-------~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~-~~~~~~~~~~~~~~~~~ 300 (397)
T PRK07568 229 IIDSVSKRYSACGARIGCLISKN-------KELIAAAMKLCQARLSPPTLEQIGAAALLDTP-ESYFDEVREEYKKRRDI 300 (397)
T ss_pred EEecchhhccCCCcceEEEecCC-------HHHHHHHHHHhhccCCCCcHHHHHHHHHhhCC-HHHHHHHHHHHHHHHHH
Confidence 99999999999999999999854 24666665543334577888999999999753 57888999999999999
Q ss_pred HHHHhhcCCCCcCCCCCCCceEEEEecCccccCCCCCHHHHHHHHHhh-----cCeEEEcCCCCCC-----CCeEEEEee
Q 014936 319 CYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKE-----ESVIILPGTAVGL-----KNWLRVTFA 388 (415)
Q Consensus 319 l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~-----~gi~v~~g~~~~~-----~~~iRi~~~ 388 (415)
+.+.|++++++. +..|.+|+|+|++++. .+..++...++++ +||.+.||..|+. ++++||+++
T Consensus 301 l~~~L~~~~~~~-~~~p~g~~~~~~~l~~------~~~~~~~~~l~~~~~~~~~gv~v~pg~~f~~~~~~~~~~iRls~~ 373 (397)
T PRK07568 301 LYEELNKIPGVV-CEKPKGAFYIIAKLPV------DDAEDFAKWLLTDFNYNGETVMVAPASGFYATPGLGKNEIRIAYV 373 (397)
T ss_pred HHHHHhcCCCce-ecCCCcceEEEEecCC------CCHHHHHHHHHhhcccccceEEEeCchHhcCCCCCCCCeEEEEEe
Confidence 999999887776 5578999999999864 1466777777654 6999999998842 469999998
Q ss_pred CChhhHHHHHHHHHHHHHHHHH
Q 014936 389 VDPYSLEECLDRIKSFYQRHAK 410 (415)
Q Consensus 389 ~~~~~l~~~l~~l~~~~~~~~~ 410 (415)
.+++++++++++|.++++++..
T Consensus 374 ~~~~~~~~~~~~l~~~l~~~~~ 395 (397)
T PRK07568 374 LNEEDLKRAMEILKEALEKYNK 395 (397)
T ss_pred CCHHHHHHHHHHHHHHHHHhhc
Confidence 8889999999999999987653
No 41
>PRK06108 aspartate aminotransferase; Provisional
Probab=100.00 E-value=3.5e-50 Score=380.35 Aligned_cols=353 Identities=28% Similarity=0.445 Sum_probs=302.7
Q ss_pred CcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHH
Q 014936 34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAI 113 (415)
Q Consensus 34 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al 113 (415)
.+.+++|+.|+|+ +++++.+.+++.+.+.... ..|+++.|.+++|+++++++++.+|..+++++|++|+|+++++
T Consensus 23 ~~~~i~l~~g~~~----~~~~~~~~~~~~~~~~~~~-~~Y~~~~G~~~lr~~la~~~~~~~~~~~~~~~i~~t~g~~~al 97 (382)
T PRK06108 23 REGVLPLWFGESD----LPTPDFIRDAAAAALADGE-TFYTHNLGIPELREALARYVSRLHGVATPPERIAVTSSGVQAL 97 (382)
T ss_pred cCCeEEecCCCCC----CCCCHHHHHHHHHHHhcCC-CCCCCCCCCHHHHHHHHHHHHHHhCCCcCcceEEEeCChHHHH
Confidence 3568999999975 6778999999999887643 4699989999999999999998888889999999999999999
Q ss_pred HHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCC-CCCCCChhHHHhhcCCCceEEEecCCCCccccCCCH
Q 014936 114 DVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPD-KGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSY 192 (415)
Q Consensus 114 ~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~ 192 (415)
..++.+++++||+|+++.|+|..+...++..|++++.++.+.+ ++|.+|++.+++.++++++++++++|+||||.+++.
T Consensus 98 ~~~~~~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~~~~~~~~i~l~~p~NPtG~~~~~ 177 (382)
T PRK06108 98 MLAAQALVGPGDEVVAVTPLWPNLVAAPKILGARVVCVPLDFGGGGWTLDLDRLLAAITPRTRALFINSPNNPTGWTASR 177 (382)
T ss_pred HHHHHHhcCCCCEEEEeCCCccchHHHHHHCCCEEEEeeCCCCCCCccCCHHHHHHhcCccceEEEEECCCCCCCcccCH
Confidence 9999999999999999999999999999999999999998653 457799999999998889999999999999999999
Q ss_pred HHHHHHHHHHhhcCcEEEEccccCCcccC-CCCccccccc-CCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHH
Q 014936 193 QHLQKLAETANKLKTLVIADEVYGHLVFG-DKPFVPMGVF-GSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPK 270 (415)
Q Consensus 193 ~~l~~i~~~~~~~~~~li~De~~~~~~~~-~~~~~~~~~~-~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~ 270 (415)
+++++|+++|+++|+++|+||+|.++.++ +....++..+ ...+++++++||||.|+++|+|+||+++++ +
T Consensus 178 ~~~~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~~~~~~--------~ 249 (382)
T PRK06108 178 DDLRAILAHCRRHGLWIVADEVYERLYYAPGGRAPSFLDIAEPDDRIIFVNSFSKNWAMTGWRLGWLVAPP--------A 249 (382)
T ss_pred HHHHHHHHHHHHCCcEEEEehhhhhhccCCCCCCCCHhhcCCCcCCEEEEeechhhccCcccceeeeeCCH--------H
Confidence 99999999999999999999999999876 3333333333 234679999999999999999999999864 6
Q ss_pred HHHHHHhhcc-ccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCccc
Q 014936 271 VVERMKKYFD-ILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSL 349 (415)
Q Consensus 271 ~~~~~~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~ 349 (415)
+++.+..... ...+++.+.|.++..+|... ..++++.+++++++++.+.+.|++++++. +..|.+|+|+|++++..
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~q~a~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~-~~~p~~g~~~~~~l~~~- 326 (382)
T PRK06108 250 LGQVLEKLIEYNTSCVAQFVQRAAVAALDEG-EDFVAELVARLRRSRDHLVDALRALPGVE-VAKPDGAMYAFFRIPGV- 326 (382)
T ss_pred HHHHHHHHHHhcccCCChHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHHHhCCCCc-ccCCCeeEEEEEeCCCC-
Confidence 7777766532 34567888999999999754 56788999999999999999999887888 54788999999988642
Q ss_pred cCCCCCHHHHHHHHHhhcCeEEEcCCCCCC--CCeEEEEeeCChhhHHHHHHHHHHHHH
Q 014936 350 LDDIIDDIDFCFKLAKEESVIILPGTAVGL--KNWLRVTFAVDPYSLEECLDRIKSFYQ 406 (415)
Q Consensus 350 ~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~--~~~iRi~~~~~~~~l~~~l~~l~~~~~ 406 (415)
.+..+++..+++++||.+.||..|+. .+++|++++.+++++++++++|+++++
T Consensus 327 ----~~~~~~~~~ll~~~gV~v~pg~~f~~~~~~~~Ris~~~~~~~l~~~l~~l~~~l~ 381 (382)
T PRK06108 327 ----TDSLALAKRLVDEAGLGLAPGTAFGPGGEGFLRWCFARDPARLDEAVERLRRFLA 381 (382)
T ss_pred ----CCHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEecCCHHHHHHHHHHHHHHHh
Confidence 24677888888888999999998864 589999998889999999999988764
No 42
>PRK12414 putative aminotransferase; Provisional
Probab=100.00 E-value=3.1e-50 Score=379.38 Aligned_cols=349 Identities=23% Similarity=0.410 Sum_probs=295.7
Q ss_pred CcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCC-CcEEEeCChHHH
Q 014936 34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTP-NDVFVTSGCTQA 112 (415)
Q Consensus 34 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~-~~i~i~~g~~~a 112 (415)
.+++++|+.|.|+ +++++.+.+++.+.+... ...|+++.|.+++|+.+++++++.+|...++ ++|++|+|++++
T Consensus 28 ~~~~i~l~~g~p~----~~~~~~~~~~~~~~~~~~-~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~it~g~~~a 102 (384)
T PRK12414 28 QHDALNLSQGAPN----FAPDPALVEGVARAMRDG-HNQYAPMAGIAALREALAEKTERLYGARYDPASEVTVIASASEG 102 (384)
T ss_pred hCCeEEcCCCCCC----CCCCHHHHHHHHHHHHhC-CCCcCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEECChHHH
Confidence 3568999999975 667888999998877653 3589998999999999999999888877665 689999999999
Q ss_pred HHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCH
Q 014936 113 IDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSY 192 (415)
Q Consensus 113 l~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~ 192 (415)
+..++.+++++||+|+++.|+|..+...++..|.+++.++.+. +++.+|++.+++.++++++++++++||||||.+++.
T Consensus 103 l~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~-~~~~~d~~~l~~~l~~~~~~v~i~~p~NPTG~~~s~ 181 (384)
T PRK12414 103 LYAAISALVHPGDEVIYFEPSFDSYAPIVRLQGATPVAIKLSP-EDFRVNWDEVAAAITPRTRMIIVNTPHNPSATVFSA 181 (384)
T ss_pred HHHHHHHhcCCCCEEEEeCCCccchHHHHHHcCCEEEEEecCc-cccccCHHHHHhhcCcccEEEEEcCCCCCCCcCCCH
Confidence 9999999999999999999999999999999999999998754 357799999999998889999999999999999999
Q ss_pred HHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCC-CCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHH
Q 014936 193 QHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS-TVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKV 271 (415)
Q Consensus 193 ~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~ 271 (415)
+++++|+++|+++|+++|+||+|..+.+++....++..+.. .+++++++||||.|+++|+|+||+++++ ++
T Consensus 182 ~~~~~i~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~~~pGlRiG~~v~~~--------~l 253 (384)
T PRK12414 182 ADLARLAQLTRNTDIVILSDEVYEHVVFDGARHHSMARHRELAERSVIVSSFGKSYHVTGWRVGYCLAPA--------EL 253 (384)
T ss_pred HHHHHHHHHHHHCCeEEEEhhhhhhccCCCCCccCcccCcCccCcEEEEecccccccCccceEEEEecCH--------HH
Confidence 99999999999999999999999999887654444544432 4579999999999999999999999865 67
Q ss_pred HHHHHhhcc-ccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCcccc
Q 014936 272 VERMKKYFD-ILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLL 350 (415)
Q Consensus 272 ~~~~~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~ 350 (415)
++.+..... ...+++.+.|.++..+|++. .+..+.++.++++++.+.+.|++. ++. +..|.+|+|+|++++...
T Consensus 254 ~~~l~~~~~~~~~~~s~~~q~a~~~~l~~~--~~~~~~~~~~~~~r~~l~~~L~~~-g~~-~~~~~gg~~~~~~~~~~~- 328 (384)
T PRK12414 254 MDEIRKVHQFMVFSADTPMQHAFAEALAEP--ASYLGLGAFYQRKRDLLARELAGS-RFE-LLPSEGSFFMLARFRHFS- 328 (384)
T ss_pred HHHHHHHHhheecCCCcHHHHHHHHHhcCC--hHHHHHHHHHHHHHHHHHHHHHhC-CCe-ecCCCcceEEEEcccccC-
Confidence 777777643 34677889999999999764 234567788999999999999987 677 557889999998875311
Q ss_pred CCCCCHHHHHHHHHhhcCeEEEcCCCCCC----CCeEEEEeeCChhhHHHHHHHHHH
Q 014936 351 DDIIDDIDFCFKLAKEESVIILPGTAVGL----KNWLRVTFAVDPYSLEECLDRIKS 403 (415)
Q Consensus 351 ~~~~~~~~~~~~ll~~~gi~v~~g~~~~~----~~~iRi~~~~~~~~l~~~l~~l~~ 403 (415)
+ .++.+++..+++++||.+.||+.|+. .+++||+++.+++++++++++|.+
T Consensus 329 -~-~~~~~~~~~~l~~~gV~v~pg~~f~~~~~~~~~iRis~~~~~~~~~~~~~rl~~ 383 (384)
T PRK12414 329 -D-ESDSDFVLRLIRDARVATIPLSAFYTDGTDTGLIRLSFSKDDATLVEGARRLCS 383 (384)
T ss_pred -C-CCHHHHHHHHHHhCCEEEecchhhcCCCCCCCEEEEEecCCHHHHHHHHHHHhh
Confidence 1 14567787888889999999998853 479999998889999999999874
No 43
>COG1168 MalY Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism]
Probab=100.00 E-value=2.6e-50 Score=351.89 Aligned_cols=355 Identities=24% Similarity=0.405 Sum_probs=315.0
Q ss_pred cCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHH
Q 014936 33 NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQA 112 (415)
Q Consensus 33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~a 112 (415)
+.++++.|..++. +++.+|.+++|+++.++.+.. +|+ .+..++.++++.|+++++++.+.++-|++++|...+
T Consensus 23 g~~DvlPmWVADM----Df~~pp~i~~Al~~rvdhGvf-GY~--~~~~~~~~ai~~w~~~r~~~~i~~e~i~~~p~VVpg 95 (388)
T COG1168 23 GNEDVLPMWVADM----DFPTPPEIIEALRERVDHGVF-GYP--YGSDELYAAIAHWFKQRHQWEIKPEWIVFVPGVVPG 95 (388)
T ss_pred CCCCcceeeeecc----cCCCCHHHHHHHHHHHhcCCC-CCC--CCCHHHHHHHHHHHHHhcCCCCCcceEEEcCcchHh
Confidence 3478999999985 489999999999999987653 777 466889999999999999999999999999999999
Q ss_pred HHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccC-CCCCCCChhHHHhhcCCC-ceEEEecCCCCccccCC
Q 014936 113 IDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLP-DKGWEVDLDDIESLADQN-TVALVIINPGNPCGNVY 190 (415)
Q Consensus 113 l~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~-~~~~~~~~~~l~~~~~~~-~~~v~i~~p~nptG~~~ 190 (415)
+..+++++.++||.|++..|.|+++.......|.++...|+.. .+.|.+|.++|++++... .++.++||||||||.++
T Consensus 96 i~~~I~~~T~~gd~Vvi~tPvY~PF~~~i~~n~R~~i~~pL~~~~~~y~iD~~~LE~~~~~~~vkl~iLCnPHNP~Grvw 175 (388)
T COG1168 96 ISLAIRALTKPGDGVVIQTPVYPPFYNAIKLNGRKVIENPLVEDDGRYEIDFDALEKAFVDERVKLFILCNPHNPTGRVW 175 (388)
T ss_pred HHHHHHHhCcCCCeeEecCCCchHHHHHHhhcCcEEEeccccccCCcEEecHHHHHHHHhcCCccEEEEeCCCCCCCccc
Confidence 9999999999999999999999999999999999999998763 455888999999988654 68999999999999999
Q ss_pred CHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCC--CCeEEEccCccccCCCCceEEEEEeeCCCCCCCh
Q 014936 191 SYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGST--VPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRK 268 (415)
Q Consensus 191 ~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~--~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~ 268 (415)
+.++|.+|.++|.+||+++|.||+|+++.+.|..+.++.+++.. ++.+.+.|.||+|..+|+++++++.+++
T Consensus 176 t~eeL~~i~elc~kh~v~VISDEIHaDlv~~g~~h~~~a~ls~~~a~~~it~~saSKtFNlaGL~~a~~Ii~n~------ 249 (388)
T COG1168 176 TKEELRKIAELCLRHGVRVISDEIHADLVLGGHKHIPFASLSERFADNSITLTSASKTFNLAGLKCAYIIISNR------ 249 (388)
T ss_pred cHHHHHHHHHHHHHcCCEEEeecccccccccCCCccchhhcChhhhcceEEEeeccccccchhhhheeEEecCH------
Confidence 99999999999999999999999999999999888887777654 7899999999999999999999999874
Q ss_pred HHHHHHHHhh-c-cccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhc-CCCCcCCCCCCCceEEEEec
Q 014936 269 PKVVERMKKY-F-DILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKE-IPCISCPHKPEGSMAVMLKL 345 (415)
Q Consensus 269 ~~~~~~~~~~-~-~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~~~~~~~~~p~~g~~~~~~l 345 (415)
++..++... . .....+|.++..|..++.++ .+.|++...+.++.+++++.+.+++ +|++. +..|++.+.+|+++
T Consensus 250 -~lr~~~~~~l~~~~~~~~n~lg~~A~~aAY~~-G~~WLd~L~~yl~~N~~~~~~~l~~~~P~v~-v~~p~gTYL~WLD~ 326 (388)
T COG1168 250 -ELRAKFLKRLKRNGLHGPSALGIIATEAAYNQ-GEPWLDELLEYLKDNRDYVADFLNKHLPGVK-VTEPQGTYLAWLDC 326 (388)
T ss_pred -HHHHHHHHHHHHhcCCCCchHHHHHHHHHHHh-chHHHHHHHHHHHHHHHHHHHHHHhhCCCcE-EecCCCceeeeeec
Confidence 344444333 2 33468899999999999976 4699999999999999999999996 79999 66999999999998
Q ss_pred CccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCC--CCeEEEEeeCChhhHHHHHHHHHHHHHH
Q 014936 346 NLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGL--KNWLRVTFAVDPYSLEECLDRIKSFYQR 407 (415)
Q Consensus 346 ~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~--~~~iRi~~~~~~~~l~~~l~~l~~~~~~ 407 (415)
..-.+ ++.+..+.++.+.+|.+.+|..||. .+++|++++++.+.+++++++|+.++++
T Consensus 327 r~l~l----~d~~l~~~ll~~akVal~~G~~FG~~g~gf~RlN~acpr~~L~eal~ri~~al~~ 386 (388)
T COG1168 327 RELGL----DDSELAEFLLEEAKVALSPGSTFGEEGSGFVRLNFACPRAILEEALERLKRALKK 386 (388)
T ss_pred cccCC----ChHHHHHHHHHhhcEeccCCCccCcCCCceEEEecCCCHHHHHHHHHHHHHHHhc
Confidence 76433 5677888899999999999999997 5899999999999999999999988865
No 44
>TIGR03538 DapC_gpp succinyldiaminopimelate transaminase. This family of succinyldiaminopimelate transaminases (DapC) includes the experimentally characterized enzyme from Bordatella pertussis. The majority of genes in this family are proximal to genes encoding components of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=100.00 E-value=4.6e-50 Score=379.81 Aligned_cols=346 Identities=26% Similarity=0.408 Sum_probs=292.7
Q ss_pred cCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCC--CCCC-cEEEeCCh
Q 014936 33 NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYK--LTPN-DVFVTSGC 109 (415)
Q Consensus 33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~--~~~~-~i~i~~g~ 109 (415)
.+.++++|+.|+|. +++++.+++++++.+. ....|+++.|.++||+++|+|+++.++.. ++++ +|++|+|+
T Consensus 26 ~~~~~i~l~~~~p~----~~~~~~~~~a~~~~~~--~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~~~i~it~Ga 99 (393)
T TIGR03538 26 ASKPPIALSIGEPK----HPTPAFVLEALRENLH--GLSTYPTTKGLPELRQAIARWLERRFDLPTGVDPERHVLPVNGT 99 (393)
T ss_pred cCCCeEEecCCCCC----CCCCHHHHHHHHHHhh--ccCCCCCCCCCHHHHHHHHHHHHHhhCCcccCCCCceEEECCCc
Confidence 47889999999975 5668899999988765 35689999999999999999999887765 6885 89999999
Q ss_pred HHHHHHHHHHhcCCCCE--EEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccc
Q 014936 110 TQAIDVAMALLSRPGAN--ILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCG 187 (415)
Q Consensus 110 ~~al~~~~~~l~~~gd~--vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG 187 (415)
++++..++.+++++||+ |+++.|+|..+...++..|++++.++.+++++|.+|++++++++.++++++++++||||||
T Consensus 100 ~~al~~~~~~l~~~gd~~~vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~~~k~i~l~~p~NPtG 179 (393)
T TIGR03538 100 REALFAFAQAVINPGQAPLVVMPNPFYQIYEGAALLAGAEPYFLNCTAENGFLPDFDAVPESVWRRCQLLFVCSPGNPTG 179 (393)
T ss_pred HHHHHHHHHHHcCCCCcceEEecCCCCcchHHHHHhcCCeEEEeeccccCCCCCCHHHHHHHHhhcceEEEEeCCCCCcC
Confidence 99999999999999986 9999999999999999999999999987667788999999988877889999999999999
Q ss_pred cCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCC-Cccc-c---cccC--CCCCeEEEccCccccCCCCceEEEEEee
Q 014936 188 NVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDK-PFVP-M---GVFG--STVPILTLGSLSKRWIVPGWRLGWFVTT 260 (415)
Q Consensus 188 ~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~-~~~~-~---~~~~--~~~~~i~~~s~sK~~~~~G~r~G~~~~~ 260 (415)
.+++.+++++|+++|+++|++||+||+|..+.+++. ...+ + ...+ ..+++|+++||||.|+++|+|+||++++
T Consensus 180 ~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~~~GlRvG~~i~~ 259 (393)
T TIGR03538 180 AVLSLDTLKKLIELADQYGFIIASDECYSELYFDEGNPPAGLLQAAAQLGRDDFRRCLVFHSLSKRSNLPGLRSGFVAGD 259 (393)
T ss_pred cccCHHHHHHHHHHHHHCCEEEEECcchhhcccCCCCCCcCHHHhcccccccccccEEEEecchhhcCCcccceEEEecC
Confidence 999999999999999999999999999999887642 2222 1 1121 2468999999999999999999999986
Q ss_pred CCCCCCChHHHHHHHHhhcc-ccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCce
Q 014936 261 DPCGMFRKPKVVERMKKYFD-ILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSM 339 (415)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~ 339 (415)
+ ++++.+..... ...+.+++.|.++...+.. ++++++.++.++++++.+.+.|+++ +. +..|.+|+
T Consensus 260 ~--------~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~--~~~~~~~~~~~~~~~~~~~~~L~~~--~~-~~~p~gg~ 326 (393)
T TIGR03538 260 A--------EILKAFLRYRTYHGCAMPIPTQLASIAAWND--EQHVRENRALYREKFAAVLEILGQV--LD-LELPDAGF 326 (393)
T ss_pred H--------HHHHHHHHHHHhhccCcCHHHHHHHHHHhcC--hHHHHHHHHHHHHHHHHHHHHHHhh--Cc-ccCCCeeE
Confidence 5 67777776543 3456788888888777753 4788899999999999999999875 33 34799999
Q ss_pred EEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCC--------CCeEEEEeeCChhhHHHHHHHHHHH
Q 014936 340 AVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGL--------KNWLRVTFAVDPYSLEECLDRIKSF 404 (415)
Q Consensus 340 ~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~--------~~~iRi~~~~~~~~l~~~l~~l~~~ 404 (415)
|+|++++. ++.++...+++++||.+.||+.|+. .+++||+++.+++++++++++|.++
T Consensus 327 f~~~~~~~-------~~~~~~~~l~~~~gV~v~pg~~f~~~~~~~~~~~~~~Ris~~~~~~~l~~~l~~l~~~ 392 (393)
T TIGR03538 327 YLWPKVPG-------DDEAFARALYEEENVTVLPGRFLAREAEGVNPGEGRVRIALVAPLEECVEAAERIRSF 392 (393)
T ss_pred EEEEECCC-------CHHHHHHHHHHHCCEEEeCCccccccccCCCCCCCEEEEEecCCHHHHHHHHHHHHHh
Confidence 99999862 4667888887888999999998752 4799999988899999999999864
No 45
>PRK07550 hypothetical protein; Provisional
Probab=100.00 E-value=8.4e-50 Score=377.38 Aligned_cols=378 Identities=24% Similarity=0.284 Sum_probs=312.6
Q ss_pred cccCCccCCcchhhHHHHHHHhhhcccccccCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHH
Q 014936 3 ISNGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLT 82 (415)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~l 82 (415)
+++|+..+.+. .+.++...+.... ..+.+.++|+.|+|. +++++.+.+++.+.+.......|++..|.++|
T Consensus 2 ~~~~~~~~~~~--~~~~~~~~~~~~~---~~~~~~i~l~~~~~~----~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~l 72 (386)
T PRK07550 2 LNPLIAALFPP--PIPEVRAWLAGYD---GADGPLIDLSQAVPG----YPPPPELLRALAEAAADPAAHLYGPVEGLPEL 72 (386)
T ss_pred cchhhhhcCCh--HHHHHHHHHHHHh---hcCCCeEEeCCCCCC----CCCCHHHHHHHHHHHhCcCCcCCCCCCCCHHH
Confidence 45566665555 6667666433222 236679999999975 45678899999887755455689888899999
Q ss_pred HHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCC
Q 014936 83 RRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVD 162 (415)
Q Consensus 83 r~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 162 (415)
|+++++++++..|..+++++|++|+|+++++..++.+++++||+|+++.|+|..+...++..|++++.++.++++++.+|
T Consensus 73 r~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~ 152 (386)
T PRK07550 73 REAYAAHYSRLYGAAISPEQVHITSGCNQAFWAAMVTLAGAGDEVILPLPWYFNHKMWLDMLGIRPVYLPCDEGPGLLPD 152 (386)
T ss_pred HHHHHHHHHHHhCCCCCcceEEEecCcHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhcCCEEEEEecCCCcCCCCC
Confidence 99999999998888899999999999999999999999999999999999999999999999999999998766677789
Q ss_pred hhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCccccccc-CCCCCeEEEc
Q 014936 163 LDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVF-GSTVPILTLG 241 (415)
Q Consensus 163 ~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~-~~~~~~i~~~ 241 (415)
++.+++.++++++++++++|+||||.++|.+++++|+++|+++|+++|+||+|+.+.+++....++... +..+++++++
T Consensus 153 ~~~l~~~~~~~~~~v~~~~P~NPtG~~~~~~~~~~i~~~~~~~~~~iI~Dd~y~~~~~~~~~~~~~~~~~~~~~~~i~~~ 232 (386)
T PRK07550 153 PAAAEALITPRTRAIALVTPNNPTGVVYPPELLHELYDLARRHGIALILDETYRDFDSGGGAPHDLFADPDWDDTLVHLY 232 (386)
T ss_pred HHHHHHHhcccCcEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCeEEEEeccchhhccCCCCCcchhhCCCccccEEEEe
Confidence 999999998889999999999999999999999999999999999999999999886543322222222 2345799999
Q ss_pred cCccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhhcc-ccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHH
Q 014936 242 SLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFD-ILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICY 320 (415)
Q Consensus 242 s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~ 320 (415)
||||.|+++|+|+||+++++ ++++.+..... ...+++.++|.++..+++. .+++.++.++.++++++.+.
T Consensus 233 S~SK~~g~~G~RiG~i~~~~--------~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~ 303 (386)
T PRK07550 233 SFSKSYALTGHRVGAVVASP--------ARIAEIEKFMDTVAICAPRIGQIAVAWGLPN-LADWRAGNRAEIARRRDAFR 303 (386)
T ss_pred cchhhccCcccceEeeecCH--------HHHHHHHHHHhhcccCCCcHHHHHHHHHhcc-HHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999865 57777766543 3456788899999999875 35778888899999999999
Q ss_pred HHhhcCCCCcCCCCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCC--CCeEEEEee-CChhhHHHH
Q 014936 321 NKIKEIPCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGL--KNWLRVTFA-VDPYSLEEC 397 (415)
Q Consensus 321 ~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~--~~~iRi~~~-~~~~~l~~~ 397 (415)
+.|+.++++. + .|.+|+|+|++++... .++.+++..+++++||.+.||..|+. ++++||+++ .++++++++
T Consensus 304 ~~L~~~~~~~-~-~~~g~~~~~~~~~~~~----~~~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRis~~~~~~~~~~~~ 377 (386)
T PRK07550 304 AVFARLPGWE-L-LASGAYFAYVRHPFPD----RPSREVARRLAKEAGILCLPGTMFGPGQEGYLRLAFANADVAGIGEL 377 (386)
T ss_pred HHHHhCCCce-e-CCCceEEEEecCCCCC----CCHHHHHHHHHHhcCEEEeCchhhCCCCCCEEEEEeecCCHHHHHHH
Confidence 9998875665 3 5778999999886411 25778888888889999999998864 579999997 478999999
Q ss_pred HHHHHHH
Q 014936 398 LDRIKSF 404 (415)
Q Consensus 398 l~~l~~~ 404 (415)
+++|.++
T Consensus 378 ~~~l~~~ 384 (386)
T PRK07550 378 VERLRAF 384 (386)
T ss_pred HHHHHhh
Confidence 9999875
No 46
>PRK07590 L,L-diaminopimelate aminotransferase; Validated
Probab=100.00 E-value=9.5e-50 Score=379.19 Aligned_cols=345 Identities=18% Similarity=0.271 Sum_probs=284.8
Q ss_pred CcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcC----CCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCCh
Q 014936 34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSE----KFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGC 109 (415)
Q Consensus 34 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~----~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~ 109 (415)
+.++++|+.|+|+ +++++.+.+++.+.+... ....|+++.|.++||+++|+|+.+.+|+++++++|++|+|+
T Consensus 33 ~~~~i~l~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~~I~it~Ga 108 (409)
T PRK07590 33 EAKIIRLGIGDVT----QPLPPAVIEAMHKAVDEMGTAETFRGYGPEQGYDFLREKIAENDYQARGCDISADEIFISDGA 108 (409)
T ss_pred CCceEEecCcCCC----CCCCHHHHHHHHHHHhcccccCCccCCCCCCCCHHHHHHHHHHHHHhcCCcCChhhEEECCCH
Confidence 5679999999976 566788999998877641 34689888999999999999998888999999999999999
Q ss_pred HHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCe-----------EEEeeccCCCCCCCChhHHHhhcCCCceEEE
Q 014936 110 TQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIE-----------VRHFDLLPDKGWEVDLDDIESLADQNTVALV 178 (415)
Q Consensus 110 ~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~-----------~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~ 178 (415)
++++.++. .++++||+|++++|+|+.+...++..|.+ ++.+++++++++.++++ ++++++++
T Consensus 109 ~~al~~l~-~~~~~gd~V~v~~P~Y~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~d~~------~~~~k~i~ 181 (409)
T PRK07590 109 KCDTGNIL-DIFGPDNTIAVTDPVYPVYVDTNVMAGRTGEANEDGRYSGIVYLPCTAENNFVPELP------EEKVDIIY 181 (409)
T ss_pred HHHHHHHH-HhcCCCCEEEEeCCCCcchHHHHHHcCCcccccccccccceeEeecccccCCcccCc------ccCceEEE
Confidence 99999865 45689999999999999999999999986 88888765555555533 25789999
Q ss_pred ecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCC-CCCeEEEccCccccCCCCceEEEE
Q 014936 179 IINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS-TVPILTLGSLSKRWIVPGWRLGWF 257 (415)
Q Consensus 179 i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~~~~G~r~G~~ 257 (415)
+++||||||.+++.+++++|+++|+++|++||+||+|..+.+++....++..++. .+++|+++||||+|+++|+|+||+
T Consensus 182 l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~Y~~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~~pGlRiG~~ 261 (409)
T PRK07590 182 LCFPNNPTGTVLTKEQLKAWVDYAKENGSLILFDAAYEAFISDPSLPHSIYEIEGARECAIEFRSFSKTAGFTGTRCAYT 261 (409)
T ss_pred EeCCCCCcCCcCCHHHHHHHHHHHHHcCeEEEEEccchhhccCCCCCcchhhCCCcccceEEEecCccccCCcCceeEEE
Confidence 9999999999999999999999999999999999999998876644445555543 347899999999999999999999
Q ss_pred EeeCCCCCCChHHHHHH------------HHhhcc-ccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhh
Q 014936 258 VTTDPCGMFRKPKVVER------------MKKYFD-ILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIK 324 (415)
Q Consensus 258 ~~~~~~~~~~~~~~~~~------------~~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~ 324 (415)
++++ ++++. +..... ...+++.+.|.++..++....+.++++.++.++++++.+.+.|+
T Consensus 262 i~~~--------~li~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~q~a~~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~ 333 (409)
T PRK07590 262 VVPK--------ELKGKTSDGEGVSLNSLWNRRQSTKFNGVSYIVQRAAEAVYSPEGKAQIKELIDYYMENAKIIREGLE 333 (409)
T ss_pred EcCH--------HHhhhccccchhhhHHHHHHHHhhcccCcCHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9975 45542 111111 12357888999998888754457888999999999999999999
Q ss_pred cCCCCcCCCCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCC--CCeEEEEeeCChhhHHHHHHHHH
Q 014936 325 EIPCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGL--KNWLRVTFAVDPYSLEECLDRIK 402 (415)
Q Consensus 325 ~~~~~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~--~~~iRi~~~~~~~~l~~~l~~l~ 402 (415)
.+ ++. +..|.+|+|+|++++.. .++.++...+++++||.+.||+.|+. .+++||++..+++++++++++|+
T Consensus 334 ~~-~~~-~~~~~g~~f~wi~~~~~-----~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~~~~~~l~~~l~rl~ 406 (409)
T PRK07590 334 SA-GFE-VYGGVNAPYIWVKTPDG-----MSSWDFFDKLLQEANVVGTPGSGFGPSGEGYFRLSAFGSRENVLEAMERIK 406 (409)
T ss_pred hc-CCc-eecCCcceEEEEECCCC-----CCHHHHHHHHHHHCCEEEeChhHhCCCCCCEEEEEccCCHHHHHHHHHHHH
Confidence 87 676 44678999999999742 24667888888888999999998875 46999998778999999999998
Q ss_pred HH
Q 014936 403 SF 404 (415)
Q Consensus 403 ~~ 404 (415)
++
T Consensus 407 ~~ 408 (409)
T PRK07590 407 KA 408 (409)
T ss_pred hh
Confidence 65
No 47
>PRK07683 aminotransferase A; Validated
Probab=100.00 E-value=2.6e-49 Score=373.49 Aligned_cols=352 Identities=25% Similarity=0.463 Sum_probs=299.9
Q ss_pred CcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCC-cEEEeCChHHH
Q 014936 34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPN-DVFVTSGCTQA 112 (415)
Q Consensus 34 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~-~i~i~~g~~~a 112 (415)
.+++++|+.|.|. +++++.+++++.+.+... ...|++..|.++||+++++++++.+|+.++++ +|++|+|++++
T Consensus 27 ~~~~i~l~~~~p~----~~~~~~~~~a~~~~~~~~-~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~~I~~t~G~~~a 101 (387)
T PRK07683 27 YDNLISLTIGQPD----FPTPSHVKEAAKRAITEN-YTSYTHNAGLLELRKAACNFVKDKYDLHYSPESEIIVTIGASEA 101 (387)
T ss_pred cCCeEEecCCCCC----CCCCHHHHHHHHHHHhcC-CCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEeCChHHH
Confidence 4678999999875 566788999999987753 45898889999999999999998888888998 99999999999
Q ss_pred HHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCH
Q 014936 113 IDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSY 192 (415)
Q Consensus 113 l~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~ 192 (415)
+.+++.+++++||+|+++.|+|..+...++..|++++.++.+. +++.+|.+.+++.++++++++++++||||||.+++.
T Consensus 102 l~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~-~~~~~~~~~l~~~~~~~~~~i~i~~p~NPtG~~~s~ 180 (387)
T PRK07683 102 IDIAFRTILEPGTEVILPAPIYPGYEPIIRLCGAKPVFIDTRS-TGFRLTAEALENAITEKTRCVVLPYPSNPTGVTLSK 180 (387)
T ss_pred HHHHHHHhCCCCCEEEEcCCCccchHHHHHHcCCEEEEeecCc-ccCCCCHHHHHHhcCcCceEEEEeCCCCCCCcCCCH
Confidence 9999999999999999999999999999999999999998753 467788899999988889999999999999999999
Q ss_pred HHHHHHHHHHhhcCcEEEEccccCCcccCCCCccccccc-CCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHH
Q 014936 193 QHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVF-GSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKV 271 (415)
Q Consensus 193 ~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~-~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~ 271 (415)
+++++|+++|+++|+++|+||+|..+.+.+. ..++..+ +..+++++++||||.|++||+|+||++++. ++
T Consensus 181 ~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~-~~~~~~~~~~~~~vi~~~s~SK~~~~pGlRiG~i~~~~--------~l 251 (387)
T PRK07683 181 EELQDIADVLKDKNIFVLSDEIYSELVYEQP-HTSIAHFPEMREKTIVINGLSKSHSMTGWRIGFLFAPS--------YL 251 (387)
T ss_pred HHHHHHHHHHHHcCeEEEEecccccceeCCC-cCChhhccCCcCCeEEEeeccccccCccceeEEEEcCH--------HH
Confidence 9999999999999999999999999887653 3344444 234579999999999999999999999865 67
Q ss_pred HHHHHhhccc-cCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCcccc
Q 014936 272 VERMKKYFDI-LGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLL 350 (415)
Q Consensus 272 ~~~~~~~~~~-~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~ 350 (415)
++.+...... ..+++.+.|.++..+|.+. +.++++.+++++++++.+.+.|++. ++. +..|.+|+|+|+.++...
T Consensus 252 ~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~l~~~-~~~-~~~~~~~~~~~~~~~~~~- 327 (387)
T PRK07683 252 AKHILKVHQYNVTCASSISQYAALEALTAG-KDDAKMMRHQYKKRRDYVYNRLISM-GLD-VEKPTGAFYLFPSIGHFT- 327 (387)
T ss_pred HHHHHHHHHhccCCCChHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHHHHc-CCc-ccCCCeeEEEEEecccCC-
Confidence 7777655332 3456778899999999754 3578888899999999999999987 676 557889999998876311
Q ss_pred CCCCCHHHHHHHHHhhcCeEEEcCCCCCC--CCeEEEEeeCChhhHHHHHHHHHHHHHH
Q 014936 351 DDIIDDIDFCFKLAKEESVIILPGTAVGL--KNWLRVTFAVDPYSLEECLDRIKSFYQR 407 (415)
Q Consensus 351 ~~~~~~~~~~~~ll~~~gi~v~~g~~~~~--~~~iRi~~~~~~~~l~~~l~~l~~~~~~ 407 (415)
.++.+++..+++++||.+.||..|+. ++++||+++.+++++++++++|.+++++
T Consensus 328 ---~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~Ri~~~~~~~~~~~al~~l~~~l~~ 383 (387)
T PRK07683 328 ---MSSFDFALDLVEEAGLAVVPGSAFSEYGEGYVRLSYAYSIETLKEGLDRLEAFLQQ 383 (387)
T ss_pred ---CCHHHHHHHHHHhCCEEEcCchhhCCCCCCeEEEEecCCHHHHHHHHHHHHHHHHh
Confidence 24667888888889999999998865 5899999988899999999999998865
No 48
>PRK08912 hypothetical protein; Provisional
Probab=100.00 E-value=1.5e-49 Score=375.73 Aligned_cols=355 Identities=27% Similarity=0.401 Sum_probs=298.5
Q ss_pred CcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCC-cEEEeCChHHH
Q 014936 34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPN-DVFVTSGCTQA 112 (415)
Q Consensus 34 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~-~i~i~~g~~~a 112 (415)
+..+++|+.|.|+ .+.++.+.+++.+.+... ...|+++.|.+++|+++++++++.+|..++++ +|++|+|++++
T Consensus 25 ~~~~i~l~~g~p~----~~~p~~~~~~~~~~~~~~-~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~~i~~t~G~~~a 99 (387)
T PRK08912 25 EHGAINLGQGFPD----DPGPEDVRRAAADALLDG-SNQYPPMMGLPELRQAVAAHYARFQGLDLDPETEVMVTSGATEA 99 (387)
T ss_pred hCCeEEccCCCCC----CCCCHHHHHHHHHHHhcC-CCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCcccEEEeCCcHHH
Confidence 4578999999976 334577888887776543 45899999999999999999998888888998 99999999999
Q ss_pred HHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCH
Q 014936 113 IDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSY 192 (415)
Q Consensus 113 l~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~ 192 (415)
+..++.+++++||+|+++.|+|+.+...++..|++++.++.++ +++.+|++.+++.+.++++++++++||||||.++|.
T Consensus 100 l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~-~~~~~~~~~l~~~~~~~~~~v~l~~p~NPtG~~~s~ 178 (387)
T PRK08912 100 LAAALLALVEPGDEVVLFQPLYDAYLPLIRRAGGVPRLVRLEP-PHWRLPRAALAAAFSPRTKAVLLNNPLNPAGKVFPR 178 (387)
T ss_pred HHHHHHHhcCCCCEEEEeCCCchhhHHHHHHcCCEEEEEecCc-ccCcCCHHHHHHHhCccceEEEEeCCCCCcCcccCH
Confidence 9999999999999999999999999999999999999998753 357799999999998889999999999999999999
Q ss_pred HHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCC-CCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHH
Q 014936 193 QHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS-TVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKV 271 (415)
Q Consensus 193 ~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~ 271 (415)
+++++|+++|+++|+++|+||+|..+.+++....++..+.. .+++++++||||.|+++|+|+||+++++ ++
T Consensus 179 ~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~~~~--------~~ 250 (387)
T PRK08912 179 EELALLAEFCQRHDAVAICDEVWEHVVFDGRRHIPLMTLPGMRERTVKIGSAGKIFSLTGWKVGFVCAAP--------PL 250 (387)
T ss_pred HHHHHHHHHHHHCCeEEEEhhhhhhcccCCCCCcChhhCCCccCceEEEeechhhccCcCceeEEEecCH--------HH
Confidence 99999999999999999999999998887644444444432 4679999999999999999999999865 67
Q ss_pred HHHHHhhcc-ccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCcccc
Q 014936 272 VERMKKYFD-ILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLL 350 (415)
Q Consensus 272 ~~~~~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~ 350 (415)
++.+..... ...+.++..|.++..++.. .++++++.++.++++++.+.+.|+.. ++. +..|.+|+|+|++++....
T Consensus 251 ~~~l~~~~~~~~~~~~~~~q~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~~g~~~l~~~l~~~~~ 327 (387)
T PRK08912 251 LRVLAKAHQFLTFTTPPNLQAAVAYGLGK-PDDYFEGMRADLARSRDRLAAGLRRI-GFP-VLPSQGTYFLTVDLAPLGL 327 (387)
T ss_pred HHHHHHHHhhccccCChHHHHHHHHHHhC-CHHHHHHHHHHHHHHHHHHHHHHHhC-CCc-ccCCCcceEEEecccccCC
Confidence 777766543 2355666778888877753 35788899999999999999999988 777 5478889999998864110
Q ss_pred CCCCCHHHHHHHHHhhcCeEEEcCCCCCC----CCeEEEEeeCChhhHHHHHHHHHHHHHH
Q 014936 351 DDIIDDIDFCFKLAKEESVIILPGTAVGL----KNWLRVTFAVDPYSLEECLDRIKSFYQR 407 (415)
Q Consensus 351 ~~~~~~~~~~~~ll~~~gi~v~~g~~~~~----~~~iRi~~~~~~~~l~~~l~~l~~~~~~ 407 (415)
..++.+++..+++++||.+.||..|+. .+++|++++.+++++++++++|.+++++
T Consensus 328 --~~~~~~~~~~l~~~~gV~v~pg~~f~~~~~~~~~iRl~~~~~~~~l~~~l~rl~~~l~~ 386 (387)
T PRK08912 328 --AEDDVAFCRRLVEEAGVAAIPVSAFYEEDPVTSVVRFCFAKRDATLDEAVERLAAARRR 386 (387)
T ss_pred --CCCHHHHHHHHHhcCCEEEecchhhCCCCCCCCEEEEEEeCCHHHHHHHHHHHHHHHhc
Confidence 125677888888888999999998843 5799999998899999999999987753
No 49
>PRK07309 aromatic amino acid aminotransferase; Validated
Probab=100.00 E-value=3.6e-49 Score=373.00 Aligned_cols=353 Identities=24% Similarity=0.449 Sum_probs=296.5
Q ss_pred cceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCC-CcEEEeCChHHHH
Q 014936 35 KKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTP-NDVFVTSGCTQAI 113 (415)
Q Consensus 35 ~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~-~~i~i~~g~~~al 113 (415)
+++++|+.|.|+ +++++.+.+++.+.+... ...|+++.|.+++|+++++++++.++..+.+ ++|++|+|+++++
T Consensus 30 ~~~i~l~~~~~~----~~~~~~~~~~~~~~~~~~-~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~i~it~G~~~al 104 (391)
T PRK07309 30 PGILKLTLGEPD----FTTPDHVKEAAKRAIDAN-QSHYTGMAGLLELRQAAADFVKEKYNLDYAPENEILVTIGATEAL 104 (391)
T ss_pred CCeEEcCCCCCC----CCCCHHHHHHHHHHHhcC-CCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEeCChHHHH
Confidence 568999999976 555788899998877643 3479888999999999999999878877764 7999999999999
Q ss_pred HHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCC---CceEEEecCCCCccccCC
Q 014936 114 DVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ---NTVALVIINPGNPCGNVY 190 (415)
Q Consensus 114 ~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~---~~~~v~i~~p~nptG~~~ 190 (415)
.+++.+++++||+|++++|+|..+...++..|.++..++.+. +++.+|++.++++++. +++++++++|+||||.++
T Consensus 105 ~~~~~~~~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~~~-~~~~~d~~~l~~~~~~~~~~~~~i~l~~P~NPtG~~~ 183 (391)
T PRK07309 105 SASLTAILEPGDKVLLPAPAYPGYEPIVNLVGAEIVEIDTTE-NDFVLTPEMLEKAILEQGDKLKAVILNYPANPTGVTY 183 (391)
T ss_pred HHHHHHhcCCCCEEEEeCCCCcchHHHHHHcCCEEEEEecCC-cCCcCCHHHHHHHhhccCCCeEEEEEECCCCCCCcCc
Confidence 999999999999999999999999999999999999998743 4567899999988863 578999999999999999
Q ss_pred CHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHH
Q 014936 191 SYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPK 270 (415)
Q Consensus 191 ~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~ 270 (415)
+.+++++|+++|++||+++|+|++|.++.+++....++..+.. +++++++||||.|+++|+|+||+++++ +
T Consensus 184 s~~~~~~l~~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~~~~-~~~i~~~S~SK~~g~~GlRvG~~v~~~--------~ 254 (391)
T PRK07309 184 SREQIKALADVLKKYDIFVISDEVYSELTYTGEPHVSIAEYLP-DQTILINGLSKSHAMTGWRIGLIFAPA--------E 254 (391)
T ss_pred CHHHHHHHHHHHHHcCcEEEEEccccceeeCCCCCCCHHHhcc-CCEEEEecChhhccCccceeEEEEeCH--------H
Confidence 9999999999999999999999999999986554445444433 679999999999999999999999865 6
Q ss_pred HHHHHHhhcc-ccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCccc
Q 014936 271 VVERMKKYFD-ILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSL 349 (415)
Q Consensus 271 ~~~~~~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~ 349 (415)
+++.+..... ...+++.++|.++..+|++.. .+....++.++++++++.+.|++. ++. +..|.+|+|+|++++...
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~l~~~-~~~-~~~p~gg~~~~~~l~~~~ 331 (391)
T PRK07309 255 FTAQLIKSHQYLVTAATTMAQFAAVEALTNGK-DDALPMKKEYIKRRDYIIEKMTDL-GFK-IIKPDGAFYIFAKIPAGY 331 (391)
T ss_pred HHHHHHHHHhhcccCCChHHHHHHHHHHhCCh-hHHHHHHHHHHHHHHHHHHHHHHC-CCe-ecCCCeeEEEEEECCCCC
Confidence 7777776532 235678889999999997643 334567788899999999999987 677 557889999999887421
Q ss_pred cCCCCCHHHHHHHHHhhcCeEEEcCCCCCC--CCeEEEEeeCChhhHHHHHHHHHHHHHHH
Q 014936 350 LDDIIDDIDFCFKLAKEESVIILPGTAVGL--KNWLRVTFAVDPYSLEECLDRIKSFYQRH 408 (415)
Q Consensus 350 ~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~--~~~iRi~~~~~~~~l~~~l~~l~~~~~~~ 408 (415)
..++.+++..+++++||.+.||..|+. +++|||+++.+.+++++++++|+++++++
T Consensus 332 ---~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~~~~~~l~~~i~~l~~~~~~~ 389 (391)
T PRK07309 332 ---NQDSFKFLQDFARKKAVAFIPGAAFGPYGEGYVRLSYAASMETIKEAMKRLKEYMEEH 389 (391)
T ss_pred ---CCCHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEecCCHHHHHHHHHHHHHHHHhh
Confidence 014567787888888999999998875 57999999888899999999999988664
No 50
>PRK09082 methionine aminotransferase; Validated
Probab=100.00 E-value=1.4e-49 Score=375.33 Aligned_cols=350 Identities=23% Similarity=0.361 Sum_probs=299.5
Q ss_pred CcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCC-cEEEeCChHHH
Q 014936 34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPN-DVFVTSGCTQA 112 (415)
Q Consensus 34 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~-~i~i~~g~~~a 112 (415)
+.++++|+.|.|+ +++++.+.+++++.+... ...|++..|.+++|+++++++++.++...+++ +|++|+|++++
T Consensus 29 ~~~~i~l~~g~~~----~~~~~~~~~~~~~~~~~~-~~~Y~~~~G~~~lr~~~a~~l~~~~~~~~~~~~~i~~t~G~~~a 103 (386)
T PRK09082 29 EHGAINLSQGFPD----FDGPPYLVEALAYAMAAG-HNQYPPMTGVAALREAIAAKTARLYGRQYDADSEITVTAGATEA 103 (386)
T ss_pred hCCEEEecCCCCC----CCCCHHHHHHHHHHHHcC-CCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEeCCHHHH
Confidence 4678999999875 556788999998887653 35799889999999999999998888777775 89999999999
Q ss_pred HHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCH
Q 014936 113 IDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSY 192 (415)
Q Consensus 113 l~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~ 192 (415)
+..++.+++++||+|+++.|+|..+...++..|.+++.++.+. .++.+|++++++.++++++++++++|+||||.+++.
T Consensus 104 l~~~~~~~~~~gd~Vli~~p~y~~~~~~~~~~g~~~~~~~~~~-~~~~~d~~~l~~~~~~~~~~v~l~~p~NPtG~~~~~ 182 (386)
T PRK09082 104 LFAAILALVRPGDEVIVFDPSYDSYAPAIELAGGRAVRVALQP-PDFRVDWQRFAAAISPRTRLIILNTPHNPSGTVWSA 182 (386)
T ss_pred HHHHHHHHcCCCCEEEEeCCCchhhHHHHHHcCCEEEEEecCc-ccccCCHHHHHHhcCccceEEEEeCCCCCCCcCCCH
Confidence 9999999999999999999999999999999999999999864 357899999999998889999999999999999999
Q ss_pred HHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCC-CCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHH
Q 014936 193 QHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS-TVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKV 271 (415)
Q Consensus 193 ~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~ 271 (415)
+++++|+++|+++|+++|+||+|.++.+++....++..+.. .+++++++||||.|+++|+|+||+++++ ++
T Consensus 183 ~~~~~i~~~a~~~~i~li~De~y~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~iv~~~--------~l 254 (386)
T PRK09082 183 ADMRALWQLIAGTDIYVLSDEVYEHIVFDGAGHASVLRHPELRERAFVVSSFGKTYHVTGWKVGYCVAPA--------AL 254 (386)
T ss_pred HHHHHHHHHHHHCCEEEEEehhhhhhccCCCCCCChhhCcCccCcEEEEeechhhccchhhhhhhhhCCH--------HH
Confidence 99999999999999999999999999887654445544433 4689999999999999999999999865 67
Q ss_pred HHHHHhhcc-ccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCcccc
Q 014936 272 VERMKKYFD-ILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLL 350 (415)
Q Consensus 272 ~~~~~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~ 350 (415)
++.+..... ...+++.+.|.++..+++. .+.++++.++.++++++.+.+.|++. ++. +..|.+|+|+|++++..
T Consensus 255 ~~~~~~~~~~~~~~~~~~~q~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~L~~~-~~~-~~~~~g~~~~~~~~~~~-- 329 (386)
T PRK09082 255 SAEFRKVHQYNTFTVNTPAQLALADYLRA-EPEHYLELPAFYQAKRDRFRAALANS-RFK-LLPCEGTYFQLVDYSAI-- 329 (386)
T ss_pred HHHHHHHHhhhcCCCChHHHHHHHHHHhC-ChHHHHHHHHHHHHHHHHHHHHHHhC-CCc-ccCCCeeEEEEEecccc--
Confidence 787777642 3467888999999999864 35788889999999999999999986 777 55788999999998641
Q ss_pred CCCCCHHHHHHHHHhhcCeEEEcCCCCCC----CCeEEEEeeCChhhHHHHHHHHHH
Q 014936 351 DDIIDDIDFCFKLAKEESVIILPGTAVGL----KNWLRVTFAVDPYSLEECLDRIKS 403 (415)
Q Consensus 351 ~~~~~~~~~~~~ll~~~gi~v~~g~~~~~----~~~iRi~~~~~~~~l~~~l~~l~~ 403 (415)
++ .++.+++..+++++||.+.||+.|+. .+++|++++.+++++++++++|++
T Consensus 330 ~~-~~~~~~~~~l~~~~~v~v~pg~~f~~~~~~~~~~Ri~~~~~~~~l~~~~~rl~~ 385 (386)
T PRK09082 330 SD-LDDVEFCQWLTREHGVAAIPLSVFYADPFPHRLVRLCFAKQEETLDAAAERLCQ 385 (386)
T ss_pred CC-CCHHHHHHHHHHhCCEEEeCcHHhCCCCCCCCEEEEEecCCHHHHHHHHHHHhh
Confidence 11 25778888888899999999998753 479999998889999999999874
No 51
>PLN02231 alanine transaminase
Probab=100.00 E-value=2.5e-49 Score=382.27 Aligned_cols=366 Identities=22% Similarity=0.357 Sum_probs=291.8
Q ss_pred cceeEecccCCCCCCCCCCcHHHHHHHHHHHhc--C-CCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHH
Q 014936 35 KKVISLAMGDPTVHSCFHTTHVATEAVAEALLS--E-KFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQ 111 (415)
Q Consensus 35 ~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~--~-~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~ 111 (415)
.++++|+.+.+. ++. .+++...+.+.. + ....|+++.|.++||++||+|+.++.|+.+++++|++|+|+++
T Consensus 129 p~~i~~~~~~~~----fp~--~~i~~a~~~l~~~~~~~~~~Y~~s~G~~~lReaIA~~~~~r~g~~~~pe~I~iT~Ga~~ 202 (534)
T PLN02231 129 PSLLDKSETHGL----FSA--DAIERAWQILDQIPGRATGAYSHSQGIKGLRDAIAAGIEARDGFPADPNDIFLTDGASP 202 (534)
T ss_pred CccCCCCCcccc----CCH--HHHHHHHHHHHhcCCccccCcCCCCCcHHHHHHHHHHHHhccCCCCCcccEEEeCCHHH
Confidence 456777654422 332 444444455553 2 3567999999999999999999998899999999999999999
Q ss_pred HHHHHHHHhc-CCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCC------CceEEEecCCCC
Q 014936 112 AIDVAMALLS-RPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ------NTVALVIINPGN 184 (415)
Q Consensus 112 al~~~~~~l~-~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~------~~~~v~i~~p~n 184 (415)
++..++.+++ .+||.|+++.|+|+.|...+...|.+++.++.+++++|.+|+++|++.+++ ++++++++||+|
T Consensus 203 ai~~~~~~l~~~~gd~Vli~~P~Y~~y~~~~~~~g~~~v~~~l~~~~~~~~d~~~Le~~l~~~~~~~~~~k~ivl~nP~N 282 (534)
T PLN02231 203 AVHMMMQLLIRSEKDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLEISELKKQLEDARSKGITVRALVVINPGN 282 (534)
T ss_pred HHHHHHHHhccCCCCEEEEeCCCChhHHHHHHHcCCEEEEEecCcccCCCCCHHHHHHHHHHHhhcCCCeEEEEEeCCCC
Confidence 9999999998 479999999999999999999999999999987777799999999998754 578899999999
Q ss_pred ccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccC-CCCcccccccC-------CCCCeEEEccCcccc-CCCCceEE
Q 014936 185 PCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFG-DKPFVPMGVFG-------STVPILTLGSLSKRW-IVPGWRLG 255 (415)
Q Consensus 185 ptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~-~~~~~~~~~~~-------~~~~~i~~~s~sK~~-~~~G~r~G 255 (415)
|||.+++.+++++|+++|+++|++||+||+|.++.|+ +..+.++..+. .+.++++++||||.| +++|+|+|
T Consensus 283 PTG~vls~e~l~~Iv~~a~~~~l~lI~DEvY~~l~y~~~~~~~s~~~~~~~~g~~~~~~~vi~l~S~SK~~~g~pGlRiG 362 (534)
T PLN02231 283 PTGQVLAEENQRDIVEFCKQEGLVLLADEVYQENVYVPDKKFHSFKKVARSMGYGEKDISLVSFQSVSKGYYGECGKRGG 362 (534)
T ss_pred CCCcCCCHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCcccHHHHHhhhccccCCceEEEEeccCcccccCCccceE
Confidence 9999999999999999999999999999999999985 34444443331 123689999999975 78999999
Q ss_pred EEEeeCCCCCCChHHHHHHHHhhccccCCchhHHHHHHHHhhCCC-----c-HH---HHHHHHHHHHHHHHHHHHHhhcC
Q 014936 256 WFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQAAVPSILQQP-----D-EV---FFKKTLNLLKQSVDICYNKIKEI 326 (415)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~-----~-~~---~~~~~~~~~~~~~~~l~~~l~~~ 326 (415)
|+++.+. ++++++.+........+++...|.++..+++.. . +. +.++.++.++++++.+.+.|+++
T Consensus 363 y~~~~~~-----~~~l~~~l~k~~~~~~~s~~~~Q~~~~~~l~~p~~~~~~y~~~~~~~~~i~~~~~~r~~~l~~~L~~~ 437 (534)
T PLN02231 363 YMEVTGF-----TSDVREQIYKVASVNLCSNISGQILASLVMSPPKPGDESYESYMAEKDGILSSLARRAKTLEDALNSL 437 (534)
T ss_pred EEEEecC-----CHHHHHHHHHHHhhhcCCChHHHHHHHHHhCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 9987420 135777776654444566778888888888642 1 22 23345789999999999999998
Q ss_pred CCCcCCCCCCCceEEEEecC--cccc-----CCCCCHHHHHHHHHhhcCeEEEcCCCCCC---CCeEEEEeeCChhhHHH
Q 014936 327 PCISCPHKPEGSMAVMLKLN--LSLL-----DDIIDDIDFCFKLAKEESVIILPGTAVGL---KNWLRVTFAVDPYSLEE 396 (415)
Q Consensus 327 ~~~~~~~~p~~g~~~~~~l~--~~~~-----~~~~~~~~~~~~ll~~~gi~v~~g~~~~~---~~~iRi~~~~~~~~l~~ 396 (415)
+++. +..|++|+|+|+++. .... .+...+..++.+++++.||.+.||+.|+. ..++|+++..+++++++
T Consensus 438 ~gi~-~~~p~Ggfylw~~l~lp~~~~~~~~~~~~~~d~~~~~~Ll~~~GV~vvPGs~Fg~~~g~~~~Rit~~~~~e~l~e 516 (534)
T PLN02231 438 EGVT-CNKAEGAMYLFPRIHLPQKAIKAAEAAKTAPDAFYCKRLLNATGIVVVPGSGFGQVPGTWHFRCTILPQEDKIPA 516 (534)
T ss_pred CCce-ecCCCeeeEEeccccCcHHHHHHHhhcCCCcHHHHHHHHHHhcCEEEeCCcccCCCCCCCeEEEEeCCCHHHHHH
Confidence 8888 558999999996553 2100 01123455678888889999999999985 34699999889999999
Q ss_pred HHHHHHHHHHHHHHHh
Q 014936 397 CLDRIKSFYQRHAKQL 412 (415)
Q Consensus 397 ~l~~l~~~~~~~~~~~ 412 (415)
++++|.++++++.++.
T Consensus 517 al~RL~~~~~~~~~~~ 532 (534)
T PLN02231 517 IVSRLTEFHKSFMDEF 532 (534)
T ss_pred HHHHHHHHHHHHHHHh
Confidence 9999999999887765
No 52
>PRK05839 hypothetical protein; Provisional
Probab=100.00 E-value=9.2e-49 Score=367.78 Aligned_cols=338 Identities=24% Similarity=0.370 Sum_probs=280.4
Q ss_pred CcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHH
Q 014936 34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAI 113 (415)
Q Consensus 34 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al 113 (415)
+.++++|+.|+|. +++++.+.+++.+... ....|+++.|.++||+++|+++++.+|..+++++|++|+|+++++
T Consensus 23 ~~~~i~l~~~~p~----~~~~~~~~~a~~~~~~--~~~~Y~~~~G~~~lr~aia~~l~~~~g~~~~~~~I~it~G~~~al 96 (374)
T PRK05839 23 EYKGLDLTIGEPQ----FETPKFIQDALKNNAH--LLNKYPKSAGEESLREAQRGFFKRRFKIELKENELIPTFGTREVL 96 (374)
T ss_pred CCCeEEcCCCCCC----CCCCHHHHHHHHHHhh--ccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCcceEEEecCcHHHH
Confidence 6699999999975 5667888888887653 356899999999999999999999889889999999999999999
Q ss_pred HHHHHHhc--CCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCC
Q 014936 114 DVAMALLS--RPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYS 191 (415)
Q Consensus 114 ~~~~~~l~--~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~ 191 (415)
..++.+++ ++||.|+++.|+|+.+...++..|++++.++.+.+++|.+|++..+ + .+++++++++||||||.+++
T Consensus 97 ~~~~~~~~~~~~gd~vlv~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~d~~~~~--~-~~~k~v~i~nP~NPTG~~~s 173 (374)
T PRK05839 97 FNFPQFVLFDKQNPTIAYPNPFYQIYEGAAIASRAKVLLMPLTKENDFTPSLNEKE--L-QEVDLVILNSPNNPTGRTLS 173 (374)
T ss_pred HHHHHHHhcCCCCCEEEECCCCchhhHHHHHhcCCEEEEeecccccCCcCCcchhh--h-ccccEEEEeCCCCCcCcccC
Confidence 98888764 5789999999999999999999999999999876667777765443 2 36889999999999999999
Q ss_pred HHHHHHHHHHHhhcCcEEEEccccCCcccCCCCccccccc------CCCCCeEEEccCccccCCCCceEEEEEeeCCCCC
Q 014936 192 YQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVF------GSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGM 265 (415)
Q Consensus 192 ~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~------~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~ 265 (415)
.+++++|+++|+++|+++|+||+|.++.+++ ...++... ...+++|+++||||.|+++|+|+||+++++
T Consensus 174 ~~~l~~i~~~~~~~~~~ii~DE~Y~~~~~~~-~~~s~~~~~~~~~~~~~~~vi~~~SfSK~~~~~GlRiG~ii~~~---- 248 (374)
T PRK05839 174 LEELIEWVKLALKHDFILINDECYSEIYENT-PPPSLLEASILVGNESFKNVLVINSISKRSSAPGLRSGFIAGDA---- 248 (374)
T ss_pred HHHHHHHHHHHHHcCCEEEeccchhhcccCC-CCCCHhhhhcccCccccCcEEEEeccccccCCccceeEEEecCH----
Confidence 9999999999999999999999999976433 22222211 123689999999999999999999999864
Q ss_pred CChHHHHHHHHhhcc-ccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEe
Q 014936 266 FRKPKVVERMKKYFD-ILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLK 344 (415)
Q Consensus 266 ~~~~~~~~~~~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~ 344 (415)
++++.+..... ...+.+.+.|.++..++.. +.++++.+++++++++.+.+.| ++. .|.+|+|+|++
T Consensus 249 ----~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~--~~~~~~~~~~~~~~~~~~~~~l----~~~---~p~gg~fi~~~ 315 (374)
T PRK05839 249 ----SILKKYKAYRTYLGCASPLPLQKAAAVAWLD--DEHAEFFRNIYAKNLKLAREIL----GIT---IPPATFYVWLP 315 (374)
T ss_pred ----HHHHHHHHHHhhcCCCCChHHHHHHHHHhcc--chHHHHHHHHHHHHHHHHHHhc----CCC---CCCeeEEEEEe
Confidence 67787776642 3456777888888877754 4778888999999998887765 333 68899999999
Q ss_pred cCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCC----CCeEEEEeeCChhhHHHHHHHHHHHHH
Q 014936 345 LNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGL----KNWLRVTFAVDPYSLEECLDRIKSFYQ 406 (415)
Q Consensus 345 l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~----~~~iRi~~~~~~~~l~~~l~~l~~~~~ 406 (415)
++ +..+++.++++++||.+.||..|+. ++++||+++.+++++++++++|.++++
T Consensus 316 ~~--------~~~~~~~~l~~~~gi~v~pg~~f~~~~~~~~~iRis~~~~~~~~~~~l~~l~~~l~ 373 (374)
T PRK05839 316 VD--------NDEEFTKKLYQNEGIKVLPGSFLGRNGIGKGYVRIALVYDTPKLEKALEIIKTYLE 373 (374)
T ss_pred CC--------ChHHHHHHHHHHCCEEEeCchhhCCCCCCCCeEEEEecCCHHHHHHHHHHHHHHhh
Confidence 86 3567888887778999999988764 489999998889999999999998764
No 53
>PRK07777 aminotransferase; Validated
Probab=100.00 E-value=1.9e-48 Score=368.20 Aligned_cols=353 Identities=26% Similarity=0.409 Sum_probs=296.1
Q ss_pred CcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCC-cEEEeCChHHH
Q 014936 34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPN-DVFVTSGCTQA 112 (415)
Q Consensus 34 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~-~i~i~~g~~~a 112 (415)
..+++||+.|.|+. +.++.+.+++.+.+... ...|+++.|.+++|+++++++.+.+|..++++ +|++|+|++++
T Consensus 23 ~~~~i~l~~g~p~~----~~~~~~~~~~~~~~~~~-~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~~i~~t~G~~~a 97 (387)
T PRK07777 23 RTGAVNLGQGFPDE----DGPPEMLEAAQEAIAGG-VNQYPPGPGIPELRAAIAAQRRRRYGLEYDPDTEVLVTVGATEA 97 (387)
T ss_pred hCCeEEccCCCCCC----CCCHHHHHHHHHHHhcC-CCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEeCCcHHH
Confidence 35789999999863 33466788887777653 35799889999999999999988888888786 79999999999
Q ss_pred HHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCC-CCCCCChhHHHhhcCCCceEEEecCCCCccccCCC
Q 014936 113 IDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPD-KGWEVDLDDIESLADQNTVALVIINPGNPCGNVYS 191 (415)
Q Consensus 113 l~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~ 191 (415)
+..++.+++++||+|+++.|+|+.+...++..|.+++.++.++. +++.+|++++++.++++++++++++|+||||.+++
T Consensus 98 l~~~~~~~~~~gd~vli~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~l~~p~NPtG~~~~ 177 (387)
T PRK07777 98 IAAAVLGLVEPGDEVLLIEPYYDSYAAVIAMAGAHRVPVPLVPDGRGFALDLDALRAAVTPRTRALIVNSPHNPTGTVLT 177 (387)
T ss_pred HHHHHHHhcCCCCEEEEeCCCchhhHHHHHHCCCEEEEeecCCccCCCcCCHHHHHHhcCcccEEEEEcCCCCCCCccCC
Confidence 99999999999999999999999999999999999999988664 35779999999999888999999999999999999
Q ss_pred HHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCC-CCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHH
Q 014936 192 YQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS-TVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPK 270 (415)
Q Consensus 192 ~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~ 270 (415)
.+++++|+++|+++++++|+||+|.++.+.+....++..+.. .+++++++||||.|+++|+|+||+++++ +
T Consensus 178 ~~~~~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~~~~--------~ 249 (387)
T PRK07777 178 AAELAAIAELAVEHDLLVITDEVYEHLVFDGARHLPLATLPGMRERTVTISSAAKTFNVTGWKIGWACGPA--------P 249 (387)
T ss_pred HHHHHHHHHHHHhcCcEEEEeccchhcccCCCCcccHhhCCCCcCcEEEEeechhhccCcCceeEEEecCH--------H
Confidence 999999999999999999999999998886654445544432 4578999999999999999999999865 5
Q ss_pred HHHHHHhhcc-ccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCccc
Q 014936 271 VVERMKKYFD-ILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSL 349 (415)
Q Consensus 271 ~~~~~~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~ 349 (415)
+++.+..... .....+.+.|.++..++... +.++++.++.++++++.+.+.|+++ ++. +..|.+++|+|++++...
T Consensus 250 l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~-~~~-~~~~~g~~~~~~~~~~~~ 326 (387)
T PRK07777 250 LIAAVRAAKQYLTYVGGAPFQPAVAHALDHE-DAWVAALRDSLQAKRDRLAAGLAEA-GFE-VHDSAGTYFLCADPRPLG 326 (387)
T ss_pred HHHHHHHHHhhcccCCCCHHHHHHHHHHhCC-cHHHHHHHHHHHHHHHHHHHHHHhC-CCC-ccCCCcceEEEecccccC
Confidence 7777766543 23456777888888888653 5788889999999999999999987 777 547889999998875311
Q ss_pred cCCCCCHHHHHHHHHhhcCeEEEcCCCCCC-----CCeEEEEeeCChhhHHHHHHHHHHHH
Q 014936 350 LDDIIDDIDFCFKLAKEESVIILPGTAVGL-----KNWLRVTFAVDPYSLEECLDRIKSFY 405 (415)
Q Consensus 350 ~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~-----~~~iRi~~~~~~~~l~~~l~~l~~~~ 405 (415)
..++.+++..+++++||.+.||..|+. .+++||+++.+++++++++++|.++.
T Consensus 327 ---~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~~~~~Ri~~~~~~~~l~~~l~~l~~~~ 384 (387)
T PRK07777 327 ---YDDGTEFCRALPERVGVAAIPMSVFYDPADAWNHLVRFAFCKRDDTLDEAIRRLRALR 384 (387)
T ss_pred ---CCCHHHHHHHHHHhCCEEEeCchHhCCCCcCCCCeEEEEecCCHHHHHHHHHHHHHHh
Confidence 125678888888888999999998753 46899999889999999999998765
No 54
>TIGR03537 DapC succinyldiaminopimelate transaminase. Note: the detailed information included in the EC:2.6.1.17 record includes the assertions that the enzyme uses the pyridoxal pyrophosphate cofactor, which is consistent with the pfam00155 family, and the assertion that the amino group donor is L-glutamate, which is undetermined for the sequences in this clade.
Probab=100.00 E-value=8.6e-49 Score=365.39 Aligned_cols=341 Identities=23% Similarity=0.383 Sum_probs=288.4
Q ss_pred eeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCC-cEEEeCChHHHHHH
Q 014936 37 VISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPN-DVFVTSGCTQAIDV 115 (415)
Q Consensus 37 ~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~-~i~i~~g~~~al~~ 115 (415)
+++|+.|+|. +++++.+.+++++... ....|+++.|.++||+++++|+++.+|+.++++ +|++|+|+++++..
T Consensus 2 ~~~~~~g~p~----~~~~~~~~~~~~~~~~--~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~Iiit~Gs~~ai~~ 75 (350)
T TIGR03537 2 LFDFGTGDPK----EPTPPFIRKALIDAVP--EVSQYPSALGTKALREAISGWFERRFGVKLDPDAQVLPSAGSKEAIFH 75 (350)
T ss_pred eEeccCCCCC----CCCCHHHHHHHHHHHh--ccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEcCChHHHHHH
Confidence 5899999875 6668889999988764 355799999999999999999998888889998 99999999999999
Q ss_pred HHHHhcCCC---CEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCH
Q 014936 116 AMALLSRPG---ANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSY 192 (415)
Q Consensus 116 ~~~~l~~~g---d~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~ 192 (415)
++.+++++| |+|+++.|+|..+...++..|++++.++.++++++.+|+++++++++++++++++++|+||||.+++.
T Consensus 76 ~~~~~~~~g~~~d~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~~~ 155 (350)
T TIGR03537 76 FPLVFIDPEEDRRRVIFGTPGYPVYERGALFAGGEPTAVKLKKEDGFLLRLEKVEKSILEETKIVWINYPHNPTGATAPR 155 (350)
T ss_pred HHHHHcCCCCCCceEEEcCCCCcchHHHHHhcCCEEEEcccCcccCCccCHHHHHHhhhhccEEEEEeCCCCCcCcccCH
Confidence 999999887 69999999999999999999999999998766678899999999988889999999999999999999
Q ss_pred HHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHH
Q 014936 193 QHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVV 272 (415)
Q Consensus 193 ~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~ 272 (415)
+++++|+++|+++|+++|+||+|..+.+++ ...++..++ .+++++++||||.|+++|+|+||+++++ ++.
T Consensus 156 ~~~~~l~~~a~~~~~~ii~De~y~~~~~~~-~~~~~~~~~-~~~~i~~~s~SK~~g~~GlRiG~~~~~~--------~~~ 225 (350)
T TIGR03537 156 SYLKETIAMCREHGIILCSDECYTEIYFGE-PPHSALEVG-IENVLAFHSLSKRSGMTGYRSGFVAGDE--------KLI 225 (350)
T ss_pred HHHHHHHHHHHHcCcEEEEeccccccccCC-CCCchhhcC-cCCEEEEeecccccCCccccceeeecCH--------HHH
Confidence 999999999999999999999999877654 233333333 3589999999999999999999998754 577
Q ss_pred HHHHhhcc-ccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCccccC
Q 014936 273 ERMKKYFD-ILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLD 351 (415)
Q Consensus 273 ~~~~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~~ 351 (415)
+.++.... ...+.+++.|.++...+.. +.++++.+++++++++.+.+.|++. ++. +..|.+|+|+|++++..
T Consensus 226 ~~~~~~~~~~~~~~~~~~q~~~~~~l~~--~~~~~~~r~~l~~~~~~~~~~l~~~-g~~-~~~~~g~~~~~~~~~~~--- 298 (350)
T TIGR03537 226 SFLRKLRANFGVASPDFVQAAAKAAWSD--DNHVLERRKIFKRKRDLFIEFFNKV-GLE-YLYPDATFYLWVKVPSG--- 298 (350)
T ss_pred HHHHHHHHhhccCCCHHHHHHHHHHhCC--cHHHHHHHHHHHHHHHHHHHHHHHC-CCc-ccCCCeEEEEEEECCCC---
Confidence 77776532 3344555677877777754 4678888999999999999999987 777 55788899999998742
Q ss_pred CCCCHHHHHHHHHhhcCeEEEcCCCCCC--CCeEEEEeeCChhhHHHHHHHHHH
Q 014936 352 DIIDDIDFCFKLAKEESVIILPGTAVGL--KNWLRVTFAVDPYSLEECLDRIKS 403 (415)
Q Consensus 352 ~~~~~~~~~~~ll~~~gi~v~~g~~~~~--~~~iRi~~~~~~~~l~~~l~~l~~ 403 (415)
.++.+++..++ ++||.+.||..|+. .+++|++++.+++++++++++|++
T Consensus 299 --~~~~~l~~~L~-~~gv~v~~g~~f~~~~~~~~Ri~~~~~~~~~~~~l~~~~~ 349 (350)
T TIGR03537 299 --IDAKDYALRLL-ENGIVVAPGENFGSGEEGYVRVALVPTLEECEEALRLWER 349 (350)
T ss_pred --CCHHHHHHHHH-HCCEEEcCchhhCCCCCCEEEEEecCCHHHHHHHHHHHhc
Confidence 24667777775 46999999998865 589999998788999999998875
No 55
>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]
Probab=100.00 E-value=8.8e-49 Score=373.54 Aligned_cols=355 Identities=27% Similarity=0.414 Sum_probs=305.0
Q ss_pred cceeEecccCCCCCCCCCCcHHHHHHHHHHHhc--CC-CCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHH
Q 014936 35 KKVISLAMGDPTVHSCFHTTHVATEAVAEALLS--EK-FNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQ 111 (415)
Q Consensus 35 ~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~--~~-~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~ 111 (415)
...++|+.|.|+. .+.+...+.+++.+.++. .. ...|.++.|.++||+.|++++...+|+.+++++|++|+|+++
T Consensus 89 ~~~i~f~~g~p~~--~~fp~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~LR~~ia~~l~~~~g~~~~~~~IiiT~G~q~ 166 (459)
T COG1167 89 PSVIDFAGGLPDP--SLFPLEALRRALARVLRNYGASLALQYGPTAGLPELREAIAAYLLARRGISCEPEQIVITSGAQQ 166 (459)
T ss_pred CceecCCCCCCCc--ccCCHHHHHHHHHHHHhhcchhhhhcCCCCCCcHHHHHHHHHHHHHhcCCccCcCeEEEeCCHHH
Confidence 7789999998764 255677788888777653 22 468888899999999999999988999999999999999999
Q ss_pred HHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCC--CCccccC
Q 014936 112 AIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINP--GNPCGNV 189 (415)
Q Consensus 112 al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p--~nptG~~ 189 (415)
|++++++.+++|||+|++++|+|+.....++..|+++..+|++ +.++|++.|++.++.....+++++| +||||.+
T Consensus 167 al~l~~~~l~~pGd~v~vE~PtY~~~~~~~~~~g~~~~~vp~d---~~G~~~e~le~~~~~~~~k~~y~~P~~qNPtG~t 243 (459)
T COG1167 167 ALDLLLRLLLDPGDTVLVEDPTYPGALQALEALGARVIPVPVD---EDGIDPEALEEALAQWKPKAVYVTPTFQNPTGVT 243 (459)
T ss_pred HHHHHHHHhCCCCCEEEEcCCCcHHHHHHHHHcCCcEEecCCC---CCCCCHHHHHHHHhhcCCcEEEECCCCCCCCCCc
Confidence 9999999999999999999999999999999999999999985 3459999999998764333444455 8999999
Q ss_pred CCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChH
Q 014936 190 YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKP 269 (415)
Q Consensus 190 ~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~ 269 (415)
||.+..++|+++|++||++||+||+|+.+.+++.+..++..++..++||+++||||+ .+||+|+||++++.
T Consensus 244 ms~~rR~~Ll~lA~~~~~~IIEDD~y~el~~~~~p~~~l~~ld~~~rViy~gSFSK~-l~PglRlG~vv~p~-------- 314 (459)
T COG1167 244 MSLERRKALLALAEKYDVLIIEDDYYGELRYDGPPPPPLKALDAPGRVIYLGSFSKT-LAPGLRLGYVVAPP-------- 314 (459)
T ss_pred cCHHHHHHHHHHHHHcCCeEEeeCcchhhhcCCCCCCChHhhCCCCCEEEEeeehhh-cccccceeeeeCCH--------
Confidence 999999999999999999999999999999998888788888888999999999999 79999999999976
Q ss_pred HHHHHHHhhc-cccCCchhHHHHHHHHhhCCCc-HHHHHHHHHHHHHHHHHHHHHhhcC-CCCcCCCCCCCceEEEEecC
Q 014936 270 KVVERMKKYF-DILGDPATFIQAAVPSILQQPD-EVFFKKTLNLLKQSVDICYNKIKEI-PCISCPHKPEGSMAVMLKLN 346 (415)
Q Consensus 270 ~~~~~~~~~~-~~~~~~~~~~~~a~~~~l~~~~-~~~~~~~~~~~~~~~~~l~~~l~~~-~~~~~~~~p~~g~~~~~~l~ 346 (415)
++++.+.... ....+++.+.|.+++.++..+. +.+++++++.++++++.+.+.|++. |+...+..|.+|+|+|++++
T Consensus 315 ~~~~~~~~~k~~~~~~~s~~~Q~~la~~l~~G~~~~hl~~lR~~y~~rr~~l~~~L~~~~~~~~~~~~p~gG~flwl~l~ 394 (459)
T COG1167 315 ELIEKLLRLKQAADLGPSSLSQAALAAFLLSGHYDRHLRRLRREYARRRDALLEALAEYLPELATWTRPEGGLFLWLELP 394 (459)
T ss_pred HHHHHHHHHHHHhcCCCChHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeeeecCCceEEEEEEcC
Confidence 6788887764 4567889999999999998643 6899999999999999999999975 43333678999999999998
Q ss_pred ccccCCCCCHHHHHHHHHhhcCeEEEc-CCCCCC----CCeEEEEee-CChhhHHHHHHHHHHHHHHHH
Q 014936 347 LSLLDDIIDDIDFCFKLAKEESVIILP-GTAVGL----KNWLRVTFA-VDPYSLEECLDRIKSFYQRHA 409 (415)
Q Consensus 347 ~~~~~~~~~~~~~~~~ll~~~gi~v~~-g~~~~~----~~~iRi~~~-~~~~~l~~~l~~l~~~~~~~~ 409 (415)
.. .+..++.... .++||.+.| |..|.. .+++|++++ .+++++++++++|.+++++..
T Consensus 395 ~~-----~~~~~l~~~a-~~~gv~i~~~g~~f~~~~~~~~~~Rl~~s~~~~e~i~~gi~~l~~~~~~~~ 457 (459)
T COG1167 395 EG-----IDARELLAAA-LEKGVVVTPLGSAFSADGDPRNGLRLSFSSPSEEEIEEGIKRLAALLREAA 457 (459)
T ss_pred CC-----CCHHHHHHHH-HHCCCEEEcCCccccCCCCCCCeEEEEcCCCCHHHHHHHHHHHHHHHHHHh
Confidence 63 2566666665 456999998 888865 348999996 578999999999999998754
No 56
>PRK08175 aminotransferase; Validated
Probab=100.00 E-value=2.6e-48 Score=367.90 Aligned_cols=355 Identities=21% Similarity=0.352 Sum_probs=295.5
Q ss_pred cCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCC-cEEEeCChHH
Q 014936 33 NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPN-DVFVTSGCTQ 111 (415)
Q Consensus 33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~-~i~i~~g~~~ 111 (415)
.++++++|+.|+|+ ..+++.+.+++.+.+.......|+++.|.++||+++++|+++.+|+.++++ ++++|+|+++
T Consensus 27 ~~~~~i~l~~g~p~----~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~i~~t~G~~~ 102 (395)
T PRK08175 27 RGEDIIDFSMGNPD----GPTPPHIVEKLCEVAQRPDTHGYSTSRGIPRLRRAISRWYQDRYDVDIDPESEAIVTIGSKE 102 (395)
T ss_pred cCCCeEEcCCCCCC----CCCCHHHHHHHHHHHhCCCcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEccCcHH
Confidence 36789999999876 334566777777776555557899999999999999999998888888887 8999999999
Q ss_pred HHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcC---CCceEEEecCCCCcccc
Q 014936 112 AIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLAD---QNTVALVIINPGNPCGN 188 (415)
Q Consensus 112 al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~---~~~~~v~i~~p~nptG~ 188 (415)
++..++..++++||+|++++|+|..+...++..|+++..++.+.++. +.++++++++ ++++++++++|+||||.
T Consensus 103 ~l~~~~~~~~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~---~~~~l~~~l~~~~~~~~~v~i~~p~NPtG~ 179 (395)
T PRK08175 103 GLAHLMLATLDHGDTVLVPNPSYPIHIYGAVIAGAQVRSVPLVEGVD---FFNELERAIRESYPKPKMMILGFPSNPTAQ 179 (395)
T ss_pred HHHHHHHHhCCCCCEEEEcCCCCcchHHHHHHcCCeEEEEecccCCC---cHHHHHHHHhhccCCceEEEEeCCCCCCCC
Confidence 99999999999999999999999999988899999999998865433 4777877665 36889999999999999
Q ss_pred CCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCC-CCCeEEEccCccccCCCCceEEEEEeeCCCCCCC
Q 014936 189 VYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS-TVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFR 267 (415)
Q Consensus 189 ~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~ 267 (415)
+++.+++++|+++|+++|+++|+||+|.++.+++....++..+.. .+++++++||||.|++||+|+||+++++
T Consensus 180 ~~~~~~~~~i~~~a~~~~i~ii~De~y~~l~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~pGlRiG~~~~~~------ 253 (395)
T PRK08175 180 CVELEFFEKVVALAKRYDVLVVHDLAYADIVYDGWKAPSIMQVPGAKDVAVEFFTLSKSYNMAGWRIGFMVGNP------ 253 (395)
T ss_pred CCCHHHHHHHHHHHHHcCcEEEEecchHhhccCCCCCcchhcCCCcccCEEEEeeccccccCcchhheeeeCCH------
Confidence 999999999999999999999999999998887655455544432 3568899999999999999999999854
Q ss_pred hHHHHHHHHhhcc-ccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecC
Q 014936 268 KPKVVERMKKYFD-ILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLN 346 (415)
Q Consensus 268 ~~~~~~~~~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~ 346 (415)
++++.+..... ...+.+.+.|.++..++.. .+.++++.++.++++++.+.+.|+.+ ++. +..|.+|+|+|++++
T Consensus 254 --~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~L~~~-~~~-~~~p~~g~~i~i~l~ 328 (395)
T PRK08175 254 --ELVSALARIKSYHDYGTFTPLQVAAIAALEG-DQQCVRDIAEQYKRRRDVLVKGLHEA-GWM-VEMPKASMYVWAKIP 328 (395)
T ss_pred --HHHHHHHHHHhhcccCCCcHHHHHHHHHHhC-cHHHHHHHHHHHHHHHHHHHHHHHHc-CCc-ccCCCEEEEEEEECC
Confidence 68887776543 3456677788888888864 35778899999999999999999988 676 547889999999997
Q ss_pred ccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCC--CCeEEEEeeCChhhHHHHHHHHHHHHHH
Q 014936 347 LSLLDDIIDDIDFCFKLAKEESVIILPGTAVGL--KNWLRVTFAVDPYSLEECLDRIKSFYQR 407 (415)
Q Consensus 347 ~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~--~~~iRi~~~~~~~~l~~~l~~l~~~~~~ 407 (415)
.... ..++.+++..+++++||.+.||..|+. ++++||+++.+++.+++++++|.+++++
T Consensus 329 ~~~~--~~~~~~~~~~l~~~~gv~v~p~~~f~~~~~~~lRis~~~~~~~~~~al~~l~~~l~~ 389 (395)
T PRK08175 329 EPYA--AMGSLEFAKKLLNEAKVCVSPGIGFGDYGDTHVRFALIENRDRIRQAIRGIKAMFRA 389 (395)
T ss_pred cccC--CCCHHHHHHHHHHhCCEEEeCchhhCcCCCCeEEEEeCCCHHHHHHHHHHHHHHHHh
Confidence 5210 013577888888888999999998865 4699999988899999999999998864
No 57
>TIGR03542 DAPAT_plant LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). This clade includes characterized species in plants and Chlamydia. Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh).
Probab=100.00 E-value=6.1e-48 Score=365.97 Aligned_cols=344 Identities=20% Similarity=0.277 Sum_probs=277.1
Q ss_pred cCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcC----CCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCC
Q 014936 33 NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSE----KFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSG 108 (415)
Q Consensus 33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~----~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g 108 (415)
.+.++++|+.|+|. +++++.+.+++.+.+... ....|++..|.++||+++|+++.+ ..+++++|++|+|
T Consensus 31 ~~~~~i~l~~~~~~----~~~~~~v~~~~~~~~~~~~~~~~~~~Y~p~~g~~~lr~aia~~~~~---~~~~~d~I~it~G 103 (402)
T TIGR03542 31 PSADIIRLGIGDTT----QPLPASVIEAFHNAVDELASEETFRGYGPEQGYPFLREAIAENDYR---GRIDPEEIFISDG 103 (402)
T ss_pred CCCCeEEcCCCCCC----CCCCHHHHHHHHHHHhcccccccccCCCCCCCCHHHHHHHHHHHHh---cCCCHHHEEECCC
Confidence 36789999999865 566788999988877642 235798888999999999998633 1478999999999
Q ss_pred hHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCC-----------eEEEeeccCCCCCCCChhHHHhhcCCCceEE
Q 014936 109 CTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHI-----------EVRHFDLLPDKGWEVDLDDIESLADQNTVAL 177 (415)
Q Consensus 109 ~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~-----------~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v 177 (415)
+++++.+++ .++.+||+|++++|+|..+...++..|+ ++..++.+.++++..+++. ..+++++
T Consensus 104 a~~al~~l~-~l~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~-----~~~~~~i 177 (402)
T TIGR03542 104 AKCDVFRLQ-SLFGSDNTVAVQDPVYPAYVDSNVMAGRAGVLDDDGRYSKITYLPCTKENNFIPDLPE-----EPKIDII 177 (402)
T ss_pred cHHHHHHHH-HhcCCCCEEEEeCCCCcchHHHHHHcCCccccccccccceEEEeecchhhCCCCCccc-----cCCceEE
Confidence 999999865 5568999999999999999999999999 8888887655555555322 1467899
Q ss_pred EecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCC-CCCeEEEccCccccCCCCceEEE
Q 014936 178 VIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS-TVPILTLGSLSKRWIVPGWRLGW 256 (415)
Q Consensus 178 ~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~~~~G~r~G~ 256 (415)
++++||||||.++|.+++++|+++|+++|++||+||+|..+.+++..+.++..++. .+++|+++||||.|++||+|+||
T Consensus 178 ~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~g~pGlRiG~ 257 (402)
T TIGR03542 178 YLCSPNNPTGTVLTKEQLKELVDYANEHGSLILFDAAYSAFISDPSLPHSIFEIPGAKECAIEFRSFSKTAGFTGVRLGW 257 (402)
T ss_pred EEeCCCCCCCccCCHHHHHHHHHHHHHcCeEEEEEchhhhhccCCCCCcchhhCCCCcccEEEEecCccccCCCCcceEE
Confidence 99999999999999999999999999999999999999998876543444444443 35789999999999999999999
Q ss_pred EEeeCCCCCCChHHHH--------HHHHhhc-cccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCC
Q 014936 257 FVTTDPCGMFRKPKVV--------ERMKKYF-DILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIP 327 (415)
Q Consensus 257 ~~~~~~~~~~~~~~~~--------~~~~~~~-~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~ 327 (415)
+++++ +++ ..+.... ....+++.++|.++..++......++.+.++.++++++.+.+.|++.
T Consensus 258 ~i~~~--------~l~~~~~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~- 328 (402)
T TIGR03542 258 TVVPK--------ELTYADGHSVIQDWERRQCTKFNGASYPVQRAAEAAYAGEGLQPILEAISYYMENARILRKALEAA- 328 (402)
T ss_pred EEecH--------HHhhcchhhHHHHHHHHhhhcccCCCHHHHHHHHHHHcCcchhHHHHHHHHHHHHHHHHHHHHHhc-
Confidence 99975 333 2222221 22335788899998888876444566777788999999999999987
Q ss_pred CCcCCCCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCC--CCeEEEEeeCChhhHHHHHHHHHHH
Q 014936 328 CISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGL--KNWLRVTFAVDPYSLEECLDRIKSF 404 (415)
Q Consensus 328 ~~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~--~~~iRi~~~~~~~~l~~~l~~l~~~ 404 (415)
++. +..|.+|+|+|++++.. .++.+++..+++++||.+.||+.|+. ++++||+++.+++++++++++|+++
T Consensus 329 ~~~-~~~~~~~~f~~v~l~~~-----~~~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRis~~~~~~~l~~~l~~l~~~ 401 (402)
T TIGR03542 329 GFK-VYGGEHAPYLWVKTPEG-----ISSWDFFDFLLYQYHVVGTPGSGFGPSGEGFVRFSAFGKRENIVEACERIKEA 401 (402)
T ss_pred Cce-ecCCCceeEEEEECCCC-----CCHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEecCCHHHHHHHHHHHHhh
Confidence 666 44667899999998742 25678888888888999999998865 5899999977899999999999865
No 58
>PRK07865 N-succinyldiaminopimelate aminotransferase; Reviewed
Probab=100.00 E-value=4e-47 Score=356.28 Aligned_cols=355 Identities=22% Similarity=0.309 Sum_probs=285.6
Q ss_pred CccccCCccCCcchhhHHHHHHHhhhcccccccCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcH
Q 014936 1 MEISNGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLP 80 (415)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~ 80 (415)
|++|.|-...... .+..+..... .++.++++|+.|+|. .+.++.+++++.+... ...|+++.|.+
T Consensus 1 ~~~~~~~~~~~~~--~~~~~~~~~~------~~~~~~i~l~~~~p~----~~~~~~~~~~~~~~~~---~~~Y~~~~G~~ 65 (364)
T PRK07865 1 MPVSARLPDFPWD--TLAPAKATAA------AHPDGIVDLSVGTPV----DPVPPVIQEALAAAAD---APGYPTTAGTP 65 (364)
T ss_pred CCccccCCCccHH--HHHHHHHHHH------hcCCCEEEcCCCCCC----CCCCHHHHHHHHHHHh---hCCCCCccCCH
Confidence 7788887777765 4444433221 235678999999865 4556888888877543 24799889999
Q ss_pred HHHHHHHHHHhhhCCCC-CCCCcEEEeCChHHHHHHHHHHh-cCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCC
Q 014936 81 LTRRAIAEYLSRDLPYK-LTPNDVFVTSGCTQAIDVAMALL-SRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKG 158 (415)
Q Consensus 81 ~lr~~ia~~~~~~~~~~-~~~~~i~i~~g~~~al~~~~~~l-~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~ 158 (415)
++|+++++|+.+.+|.. +++++|++|+|+++++..++.++ +++||.|++++|+|+.+...++..|+++..++
T Consensus 66 ~lr~~ia~~l~~~~~~~~~~~~~I~it~G~~~~i~~~~~~l~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~------ 139 (364)
T PRK07865 66 ELREAIVGWLARRRGVTGLDPAAVLPVIGSKELVAWLPTLLGLGPGDVVVIPELAYPTYEVGARLAGATVVRAD------ 139 (364)
T ss_pred HHHHHHHHHHHHHcCCCCCCcccEEEccChHHHHHHHHHHHcCCCCCEEEECCCCcccHHHHHHhcCCEEEecC------
Confidence 99999999999988886 89999999999999999988888 69999999999999999999999999988764
Q ss_pred CCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCccccccc---CCCC
Q 014936 159 WEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVF---GSTV 235 (415)
Q Consensus 159 ~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~---~~~~ 235 (415)
++++++. .+++++++++||||||.+++.+++++|+++|+++|+++|+||+|.++.+++.....+... ...+
T Consensus 140 ---~~~~l~~---~~~~~v~~~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~ 213 (364)
T PRK07865 140 ---SLTELGP---QRPALIWLNSPSNPTGRVLGVDHLRKVVAWARERGAVVASDECYLELGWDAEPVSILDPRVCGGDHT 213 (364)
T ss_pred ---ChhhCCc---ccceEEEEcCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhhhccCCCCCccccccccCCccc
Confidence 1233322 467899999999999999999999999999999999999999999988765322222111 1235
Q ss_pred CeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhhc-cccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHH
Q 014936 236 PILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYF-DILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQ 314 (415)
Q Consensus 236 ~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~ 314 (415)
++++++||||.|+++|+|+||+++++ ++++.++... ....+.+.+.|.++..+|.+ .+++++.++.+++
T Consensus 214 ~~i~~~S~SK~~~~~GlRiG~i~~~~--------~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~--~~~~~~~~~~~~~ 283 (364)
T PRK07865 214 GLLAVHSLSKQSNLAGYRAGFVAGDP--------ALVAELLEVRKHAGMMVPAPVQAAMVAALGD--DAHVREQRERYAR 283 (364)
T ss_pred eEEEEeechhccCCCceeeEEEecCH--------HHHHHHHHHHHhcCCCcCHHHHHHHHHHhCC--HHHHHHHHHHHHH
Confidence 79999999999999999999999864 6777777653 33456788899999999875 4678888899999
Q ss_pred HHHHHHHHhhcCCCCcCCCCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCC--CCeEEEEeeCChh
Q 014936 315 SVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGL--KNWLRVTFAVDPY 392 (415)
Q Consensus 315 ~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~--~~~iRi~~~~~~~ 392 (415)
+++.+.+.|++. ++. +..|.+|+|+|++++. +..++... +.++||.+.||..|+. ++++||+++.+++
T Consensus 284 ~~~~l~~~L~~~-g~~-~~~~~~~~~~~~~~~~-------~~~~~~~~-l~~~gv~v~pg~~f~~~~~~~iRi~~~~~~~ 353 (364)
T PRK07865 284 RRAVLRPALEAA-GFR-VDHSEAGLYLWATRGE-------DCWDTVAW-LAERGILVAPGDFYGPAGAQHVRVALTATDE 353 (364)
T ss_pred HHHHHHHHHHHc-CCc-ccCCCccEEEEEeCCC-------CHHHHHHH-HHHCCEEEeCccccCcCCCCEEEEEecCCHH
Confidence 999999999987 777 5478889999998742 34455554 4678999999998763 6799999987899
Q ss_pred hHHHHHHHHH
Q 014936 393 SLEECLDRIK 402 (415)
Q Consensus 393 ~l~~~l~~l~ 402 (415)
++++++++|+
T Consensus 354 ~~~~~~~~l~ 363 (364)
T PRK07865 354 RIAAAVERLA 363 (364)
T ss_pred HHHHHHHHhh
Confidence 9999999885
No 59
>PRK06836 aspartate aminotransferase; Provisional
Probab=100.00 E-value=6.9e-47 Score=357.81 Aligned_cols=380 Identities=24% Similarity=0.377 Sum_probs=299.5
Q ss_pred ccCCccCCcchhhHHHHHHHhhhcccccccCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcC--CCCCCCCCCCcHH
Q 014936 4 SNGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSE--KFNGYAPTAGLPL 81 (415)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~--~~~~y~~~~g~~~ 81 (415)
|.+..++.+....++.++....+ ...+.+..++++|+.|+|+ +++++.+.+++.+.+... ....|++..|.++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~g~p~----~~~~~~v~~a~~~~~~~~~~~~~~y~~~~g~~~ 77 (394)
T PRK06836 3 SEKIKGLLEKSSWIRKMFEEGAR-LKAEYGADNVFDFSLGNPS----VPPPAAVKEALRELAEEEDPGLHGYMPNAGYPE 77 (394)
T ss_pred chHHHHHHhcccHHHHHHHHHHH-HHhhcCCCCeEEecCcCCC----CCCCHHHHHHHHHHHhcCCcCcccCCCCCCCHH
Confidence 44444555554455555443221 1111235678999999865 566789999998877642 2468988899999
Q ss_pred HHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCC
Q 014936 82 TRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEV 161 (415)
Q Consensus 82 lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~ 161 (415)
+|+.+++++++.++.++++++|++|+|+++++..++.+++++||.|++++|+|..+...++..|+++..++.+++ ++.+
T Consensus 78 lr~~ia~~l~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vli~~p~~~~~~~~~~~~g~~v~~v~~~~~-~~~~ 156 (394)
T PRK06836 78 VREAIAESLNRRFGTPLTADHIVMTCGAAGALNVALKAILNPGDEVIVFAPYFVEYRFYVDNHGGKLVVVPTDTD-TFQP 156 (394)
T ss_pred HHHHHHHHHHHHhCCCCCcCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCccHHHHHHHcCCEEEEEecCCc-cCcC
Confidence 999999999988888889999999999999999999999999999999999999999999999999999998653 4679
Q ss_pred ChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhh------cCcEEEEccccCCcccCCCCcccccccCCCC
Q 014936 162 DLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANK------LKTLVIADEVYGHLVFGDKPFVPMGVFGSTV 235 (415)
Q Consensus 162 ~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~------~~~~li~De~~~~~~~~~~~~~~~~~~~~~~ 235 (415)
|+++++++++++++++++++|+||||.++|.+++++|+++|++ ||+++|+||+|.++.+++.....+.. ..+
T Consensus 157 d~~~l~~~~~~~~~~v~~~~p~NPtG~~~~~~~~~~l~~la~~~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~--~~~ 234 (394)
T PRK06836 157 DLDALEAAITPKTKAVIINSPNNPTGVVYSEETLKALAALLEEKSKEYGRPIYLISDEPYREIVYDGAEVPYIFK--YYD 234 (394)
T ss_pred CHHHHHhhcCcCceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHhhhccCCCeEEEEeccccccccCCCCCCChHH--ccC
Confidence 9999999998899999999999999999999999999999998 89999999999998876543333222 235
Q ss_pred CeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhhcc--ccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHH
Q 014936 236 PILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFD--ILGDPATFIQAAVPSILQQPDEVFFKKTLNLLK 313 (415)
Q Consensus 236 ~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~ 313 (415)
++++++||||.|++||+|+||+++++.. ..-..+...+..... .....++..|.++..++.+. ..++.++
T Consensus 235 ~~i~~~S~SK~~~~pGlRiG~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~------~~~~~~~ 306 (394)
T PRK06836 235 NSIVVYSFSKSLSLPGERIGYIAVNPEM--EDADDLVAALVFANRILGFVNAPALMQRVVAKCLDAT------VDVSIYK 306 (394)
T ss_pred cEEEEecchhhccCcceeeEEEecCHHH--hhhHHHHHHHHHHhhccccccCCHHHHHHHHHHhCCh------HHHHHHH
Confidence 7999999999999999999999986511 000011222221111 11356778999999998752 1356778
Q ss_pred HHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEeeCChhh
Q 014936 314 QSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFAVDPYS 393 (415)
Q Consensus 314 ~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~~~ 393 (415)
++++.+.+.|+++ ++. +..|.+|+|+|++++. .+..+++.. +.++||.+.||..|+.++++||+++.++++
T Consensus 307 ~~r~~l~~~L~~~-g~~-~~~~~gg~~~~~~~~~------~~~~~~~~~-l~~~gv~v~~g~~f~~~~~iRi~~~~~~~~ 377 (394)
T PRK06836 307 RNRDLLYDGLTEL-GFE-CVKPQGAFYLFPKSPE------EDDVAFCEK-AKKHNLLLVPGSGFGCPGYFRLSYCVDTET 377 (394)
T ss_pred HHHHHHHHHHHhC-CCE-eecCCceEEEEEeCCC------CCHHHHHHH-HHhCCEEEECchhcCCCCeEEEEecCCHHH
Confidence 8899999999888 677 5578899999998864 146677654 567899999999998789999999989999
Q ss_pred HHHHHHHHHHHHHHH
Q 014936 394 LEECLDRIKSFYQRH 408 (415)
Q Consensus 394 l~~~l~~l~~~~~~~ 408 (415)
+++++++|+++++++
T Consensus 378 ~~~~i~~l~~~l~~~ 392 (394)
T PRK06836 378 IERSLPAFEKLAKEY 392 (394)
T ss_pred HHHHHHHHHHHHHHh
Confidence 999999999998754
No 60
>PRK09275 aspartate aminotransferase; Provisional
Probab=100.00 E-value=5.2e-47 Score=360.79 Aligned_cols=390 Identities=20% Similarity=0.326 Sum_probs=291.7
Q ss_pred CCccCCcchhhHHHHHHHhhhcccccccC----cceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHH
Q 014936 6 GGIDNTGSIITIKGMLSLLMQSVDDEKNE----KKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPL 81 (415)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~ 81 (415)
.+.+-.|...+|..-+..+....+. ..| .++|+++.|.|+ +++++.+.++. +.+.. . .|+++.|.++
T Consensus 68 ~~~~g~~~~~g~~~r~~~~~~~~~~-~~g~~~l~~~i~l~~g~p~----~~~~~~v~e~~-~~~~~-~--~Y~~~~g~~~ 138 (527)
T PRK09275 68 GGLGGMPQKEGIEERFEAFLEEHKD-VPGIDFLRDAVSYVRDQLG----FDADEFVYELV-DGIIG-D--NYPVPDRMLK 138 (527)
T ss_pred CCcCCCcccccHHHHHHHHHHhCCC-CchHHHHHHHHhhcCCCCC----CCCCHHHHHHH-HHHhc-C--CCCCCCCCHH
Confidence 3455556666676666655544311 111 258999999975 77788888855 44432 2 5999999999
Q ss_pred HHHHHHHHHhh-hCCCCC-C--CCcEEEeCChHHHHHHHHHH-----hcCCCCEEEEcCCCCcchHHHHHhCC--CeEEE
Q 014936 82 TRRAIAEYLSR-DLPYKL-T--PNDVFVTSGCTQAIDVAMAL-----LSRPGANILLPRPGFPIYELSAAFRH--IEVRH 150 (415)
Q Consensus 82 lr~~ia~~~~~-~~~~~~-~--~~~i~i~~g~~~al~~~~~~-----l~~~gd~vi~~~p~y~~~~~~~~~~g--~~~~~ 150 (415)
+|++|++++.+ ..+... . .++|++|+|+++++..++.+ ++++||+|++++|+|+.|...++..| .+++.
T Consensus 139 lreaia~~~~~~~~~~~~~~~~~~~I~vT~Ga~~al~~~~~aL~~~~ll~pGD~Vlv~~P~y~~Y~~~~~l~g~~~~~v~ 218 (527)
T PRK09275 139 HTEKIVKDYLRQEMCGGRPPKGEFDLFAVEGGTAAMCYIFDSLKENGLLKAGDKIALMTPIFTPYLEIPELPRYDLEVVH 218 (527)
T ss_pred HHHHHHHHHHHhhccCCCCCCCcCeEEEeCCHHHHHHHHHHHHhhhhcCCCCCEEEEeCCChHHHHHHHHHcCCCeEEEE
Confidence 99999995544 333222 2 34999999999999999886 68999999999999999999888775 44555
Q ss_pred eeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhh--cCcEEEEccccCCcccCCCCcccc
Q 014936 151 FDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANK--LKTLVIADEVYGHLVFGDKPFVPM 228 (415)
Q Consensus 151 ~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~--~~~~li~De~~~~~~~~~~~~~~~ 228 (415)
++.+++++|.+|+++++++++++++++++++||||||.+++.+++++|+++|++ ++++||+||+|..+.+. +.++
T Consensus 219 v~~~~~~~f~~d~~~l~~~~~~~tkai~l~nP~NPTG~v~s~e~l~~I~~ia~~~~~~l~II~DEvY~~f~~~---~~s~ 295 (527)
T PRK09275 219 INADEENEWQYPDSELEKLRDPSIKALFLVNPSNPPSVAMSDESLEKIADIVNEKRPDLMIITDDVYGTFVDD---FRSL 295 (527)
T ss_pred eecCcccCCCCCHHHHHhhcCCCCCEEEEeCCcCCcCCCCCHHHHHHHHHHHHhcCCCcEEEECCCChhhccc---ccCH
Confidence 555556779999999999998899999999999999999999999999999954 59999999999997642 2233
Q ss_pred cccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCC----------------------ChH---HHHHHH----Hhh-
Q 014936 229 GVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMF----------------------RKP---KVVERM----KKY- 278 (415)
Q Consensus 229 ~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~----------------------~~~---~~~~~~----~~~- 278 (415)
... ..+++|++.||||.|+++|||+||+++++....- .+| .+++++ +..
T Consensus 296 ~~~-~~~~~I~v~SfSK~f~mtG~RlG~i~~~~~~v~~~~i~~l~~~~~~~~~~ry~~~~~~p~~~~fidrlvad~~~v~ 374 (527)
T PRK09275 296 FAV-LPYNTILVYSFSKYFGATGWRLGVIALHEDNVFDKLIAKLPEEKKKELDKRYSSLTTDPEKLKFIDRLVADSRQVA 374 (527)
T ss_pred HHh-CCCCEEEEeehhhhccCcHhHHhhhhcCchhHHHHHHHhccHHHHHHHHhhhhhccCCcchhhhHHHHHHHHHHHH
Confidence 222 2358999999999999999999999987631000 000 012222 232
Q ss_pred ccccCCchhHHHHH-----HHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCcccc---
Q 014936 279 FDILGDPATFIQAA-----VPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLL--- 350 (415)
Q Consensus 279 ~~~~~~~~~~~~~a-----~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~--- 350 (415)
.+++.+.+.+.|.+ +.++|+. .+.+.+..++.++++++.+.+.|. + .+. ...|.+++|+|++++....
T Consensus 375 ~~~t~~~s~p~Q~a~al~~~~all~~-~~~~~~~~~~~~~~Rr~~l~~~Lg-~-~~~-~~~p~g~fY~~~di~~~~~~~~ 450 (527)
T PRK09275 375 LNHTAGLSTPQQVQMALFSLFALLDE-EDAYKKAMKDIIRRRYKALYEGLG-L-PEP-EDPNNAAYYTLIDLEEWAEKNY 450 (527)
T ss_pred HhhccCCCCHHHHHHHHHHHHHHHhC-chHHHHHHHHHHHHHHHHHHHHcC-C-CCc-CCCCCeeEEEEEEhHHhhhhcc
Confidence 33456778888876 3344543 457888999999999999988883 2 222 2368999999998864210
Q ss_pred --------CCCCCHHHHHHHHHhhcCeEEEcCCCCCC-CCeEEEEee-CChhhHHHHHHHHHHHHHHHHHHh
Q 014936 351 --------DDIIDDIDFCFKLAKEESVIILPGTAVGL-KNWLRVTFA-VDPYSLEECLDRIKSFYQRHAKQL 412 (415)
Q Consensus 351 --------~~~~~~~~~~~~ll~~~gi~v~~g~~~~~-~~~iRi~~~-~~~~~l~~~l~~l~~~~~~~~~~~ 412 (415)
....++.+++.+|+++.||.+.||+.|+. ++++|+|++ .+++++.++.++|.+++.++..+.
T Consensus 451 g~~f~~~l~~~~~~~~f~~~Ll~e~gV~v~PG~~Fg~~~~~vRis~a~~~~~~~~~~~~rl~~~l~~y~~~~ 522 (527)
T PRK09275 451 GKEFADYLKKNYSPVDLLFRLAEETGVVLLPGGGFGGPEWSVRVSLANLNEEDYAKIGKAIRKLLDEYYEEY 522 (527)
T ss_pred CchhhhhhhccCCHHHHHHHHHhcCCEEEeCchhhCCCCCeEEEEEecCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 00125788999999999999999999985 578999998 688999999999999999887764
No 61
>PRK15481 transcriptional regulatory protein PtsJ; Provisional
Probab=100.00 E-value=3.3e-47 Score=364.19 Aligned_cols=339 Identities=17% Similarity=0.207 Sum_probs=280.5
Q ss_pred CcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHH
Q 014936 34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAI 113 (415)
Q Consensus 34 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al 113 (415)
+..+++|+.|.|. .++.|.+.+++.+.... ...|+++.|.++||+.+++++++..+ .+++|++|+|+++++
T Consensus 84 ~~~~i~L~~g~p~----~~~~p~~~~~~~~~~~~--~~~Y~~~~g~~~lr~~ia~~~~~~~~---~~~~Iiit~G~~~al 154 (431)
T PRK15481 84 GTPLHDLAGGNPD----PQRLPDLSRYFARLSRT--PRLYGDAPVSPELHAWAARWLRDDCP---VAFEIDLTSGAIDAI 154 (431)
T ss_pred cchhhhhhcCCCC----hhHhHHHHHHHHHhhhh--hhhcCCcCCCHHHHHHHHHHHhhccC---CcCeEEEecCcHHHH
Confidence 3467899999865 34446677877775542 35799999999999999999875322 457999999999999
Q ss_pred HHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEec-CCCCccccCCCH
Q 014936 114 DVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVII-NPGNPCGNVYSY 192 (415)
Q Consensus 114 ~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~-~p~nptG~~~~~ 192 (415)
..++.+++++||.|++++|+|+.+...++..|++++.++.+.+ ++|++.+++++++++++++++ +||||||.+++.
T Consensus 155 ~~~~~~l~~pgd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~---g~~~~~l~~~~~~~~k~i~~~p~p~NPTG~~~s~ 231 (431)
T PRK15481 155 ERLLCAHLLPGDSVAVEDPCFLSSINMLRYAGFSASPVSVDAE---GMQPEKLERALAQGARAVILTPRAHNPTGCSLSA 231 (431)
T ss_pred HHHHHHhCCCCCEEEEeCCCcHHHHHHHHHcCCeEEeeccCCC---CCCHHHHHHHHhcCCCEEEECCCCCCCCCccCCH
Confidence 9999999999999999999999999999999999999988432 489999999887788888887 999999999999
Q ss_pred HHHHHHHHHHhhc-CcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHH
Q 014936 193 QHLQKLAETANKL-KTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKV 271 (415)
Q Consensus 193 ~~l~~i~~~~~~~-~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~ 271 (415)
+++++|+++|+++ +++||+||+|.++.+.+. .+.... ..+++++++||||.|+ +|+|+||+++++ ++
T Consensus 232 ~~~~~l~~la~~~~~~~ii~De~Y~~~~~~~~--~~~~~~-~~~~vi~~~SfSK~~~-~GlRiG~~i~~~--------~~ 299 (431)
T PRK15481 232 RRAAALRNLLARYPQVLVIIDDHFALLSSSPY--HSVIPQ-TTQRWALIRSVSKALG-PDLRLAFVASDS--------AT 299 (431)
T ss_pred HHHHHHHHHHHhcCCceEEecCchhhhccCCC--CCCCcC-CCCCEEEEeeeccccC-CCceeEEEeCCH--------HH
Confidence 9999999999999 999999999999876432 122111 2358999999999998 999999999865 67
Q ss_pred HHHHHhhcc-ccCCchhHHHHHHHHhhCCCc-HHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCccc
Q 014936 272 VERMKKYFD-ILGDPATFIQAAVPSILQQPD-EVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSL 349 (415)
Q Consensus 272 ~~~~~~~~~-~~~~~~~~~~~a~~~~l~~~~-~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~ 349 (415)
++.+..... ...+.+.+.|.++..+|++.. +.++++.++.++++++.+.+.|++. ++. +..|.+|+|+|++++.
T Consensus 300 ~~~~~~~~~~~~~~~s~~~q~a~~~~l~~~~~~~~l~~~~~~~~~~r~~~~~~L~~~-~~~-~~~p~gg~f~~~~l~~-- 375 (431)
T PRK15481 300 SARLRLRLNSGTQWVSHLLQDLVYACLTDPEYQARLAQARLFYAQRRQKLARALQQY-GIA-IPSPGDGLNLWLPLDT-- 375 (431)
T ss_pred HHHHHHHHhccccCCCHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHHHHHHc-CCc-cccCCCeEEEEEECCC--
Confidence 777765432 234578899999999998754 4678899999999999999999987 776 4479999999999863
Q ss_pred cCCCCCHHHHHHHHHhhcCeEEEcCCCCCC---CCeEEEEee-CChhhHHHHHHHHHHHHH
Q 014936 350 LDDIIDDIDFCFKLAKEESVIILPGTAVGL---KNWLRVTFA-VDPYSLEECLDRIKSFYQ 406 (415)
Q Consensus 350 ~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~---~~~iRi~~~-~~~~~l~~~l~~l~~~~~ 406 (415)
+..++...+ .++||.+.||..|+. .+++||+++ .+++++++++++|++++.
T Consensus 376 -----~~~~~~~~l-~~~gV~v~pg~~f~~~~~~~~iRis~~~~~~~~i~~~~~~l~~~~~ 430 (431)
T PRK15481 376 -----DSQATALTL-AKSGWLVREGEAFGVSAPSHGLRITLSTLNDAEINRLAADLHQALN 430 (431)
T ss_pred -----CHHHHHHHH-HHCCcEEecCCccccCCCCCeEEEEcCCCChHHHHHHHHHHHHHhc
Confidence 356666666 467999999998864 368999997 578999999999998764
No 62
>PF00155 Aminotran_1_2: Aminotransferase class I and II 1-aminocyclopropane-1-carboxylate synthase signature aspartate aminotransferase signature; InterPro: IPR004839 Aminotransferases share certain mechanistic features with other pyridoxal-phosphate dependent enzymes, such as the covalent binding of the pyridoxal-phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into class I and class II. This entry includes proteins from both subfamilies.; GO: 0016769 transferase activity, transferring nitrogenous groups, 0030170 pyridoxal phosphate binding, 0009058 biosynthetic process; PDB: 3NRA_B 3P6K_B 3OP7_A 3ASB_A 3ASA_A 1W7M_A 3FVX_A 1W7N_A 3FVU_B 3FVS_A ....
Probab=100.00 E-value=3.3e-48 Score=364.52 Aligned_cols=349 Identities=30% Similarity=0.531 Sum_probs=295.9
Q ss_pred ceeEecccCCCCCCCCCCcHHHHHHHHH-HHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCC-cEEEeCChHHHH
Q 014936 36 KVISLAMGDPTVHSCFHTTHVATEAVAE-ALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPN-DVFVTSGCTQAI 113 (415)
Q Consensus 36 ~~i~l~~g~~~~~~~~~~~~~~~~a~~~-~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~-~i~i~~g~~~al 113 (415)
++|||+.|++......++.+++.+++.+ .........|+++.|.+++|+++|+|+++..+..++++ +|++++|+++++
T Consensus 2 ~~I~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~i~~~~G~~~~~ 81 (363)
T PF00155_consen 2 DVINLGSNAPLLLSQNPPPPAAIKAAIRGAATSSSFLGYPPPQGYPELREAIADFLGRRYGVPVDPEANILVTSGAQAAL 81 (363)
T ss_dssp TEEESSSSSTSSTTSSHHHHHHHHHHHHHHHHHTGCTSSTCTTHHHHHHHHHHHHHHHHHTHHTTGGEGEEEESHHHHHH
T ss_pred CEEEEECCCCCCcccccchHHHHHHHHHHhhcccccccCCCchhhHHHHHHHHHHhhhccCcccccceEEEEecccccch
Confidence 5799999997644333355666666655 33344667999999999999999999997788888999 999999999999
Q ss_pred HHHHHHh-cCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCC------CceEEEecCCCCcc
Q 014936 114 DVAMALL-SRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ------NTVALVIINPGNPC 186 (415)
Q Consensus 114 ~~~~~~l-~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~------~~~~v~i~~p~npt 186 (415)
..+...+ .++||+|+++.|+|+.+...++..|+++..++...++++.+|+++|++.+++ +++++++++|+|||
T Consensus 82 ~~~~~~~~~~~~~~vlv~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~~~~p~nPt 161 (363)
T PF00155_consen 82 FLLLRLLKINPGDTVLVPDPCYPSYIEAARLLGAEVIPVPLDSENDFHLDPEALEEALDELPSKGPRPKAVLICNPNNPT 161 (363)
T ss_dssp HHHHHHHHSSTTSEEEEEESSSTHHHHHHHHTTSEEEEEEEEETTTTEETHHHHHHHHHTSHTTTETEEEEEEESSBTTT
T ss_pred hhhhhcccccccccceecCCccccccccccccCceeeeccccccccccccccccccccccccccccccceeeeccccccc
Confidence 9999999 7899999999999999999999999999999987678889999999998877 57899999999999
Q ss_pred ccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCccc-ccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCC
Q 014936 187 GNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVP-MGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGM 265 (415)
Q Consensus 187 G~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~-~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~ 265 (415)
|.+++.+++++|+++|+++|+++|+||+|+.+.++.....+ ...+....+++++.|+||.|+++|+|+||+++++
T Consensus 162 G~~~~~~~l~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRvG~i~~~~---- 237 (363)
T PF00155_consen 162 GSVLSLEELRELAELAREYNIIIIVDEAYSDLIFGDPDFGPIRSLLDEDDNVIVVGSLSKSFGLPGLRVGYIVAPP---- 237 (363)
T ss_dssp TBB--HHHHHHHHHHHHHTTSEEEEEETTTTGBSSSSHTHHHHGHHTTTSTEEEEEESTTTTTSGGGTEEEEEEEH----
T ss_pred ccccccccccchhhhhcccccceeeeeceeccccCCCccCcccccccccccceeeeeccccccccccccccccchh----
Confidence 99999999999999999999999999999999988654433 3445555669999999999999999999999965
Q ss_pred CChHHHHHHHHhhccccCCchhHHHHHHHHhhCCCcH--HHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEE
Q 014936 266 FRKPKVVERMKKYFDILGDPATFIQAAVPSILQQPDE--VFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVML 343 (415)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~--~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~ 343 (415)
++++.++........ +.+.+.++..++.+... +++++.+++++++++++.+.|++. ++. +..+.+|+|+|+
T Consensus 238 ----~~~~~l~~~~~~~~~-~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-~~~-~~~~~~~~~~~~ 310 (363)
T PF00155_consen 238 ----ELIERLRRFQRSGLS-SSPMQAAAAAALSDPELVEKWLEELRERLRENRDLLREALEEI-GIT-VLPPEAGFFLWV 310 (363)
T ss_dssp ----HHHHHHHHHHHHTTS-SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TSE-EEHHSBSSEEEE
T ss_pred ----hhhhhhhhccccccc-cchhhHHHHHhhhcccccccccccchhhHHHHHHHHHHHHHHh-hhh-eeeccCccEEEE
Confidence 688888877553333 77888888888876432 388999999999999999999988 888 547779999999
Q ss_pred ecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEe-eCChhhHHHHHHHH
Q 014936 344 KLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTF-AVDPYSLEECLDRI 401 (415)
Q Consensus 344 ~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~-~~~~~~l~~~l~~l 401 (415)
.++.. ++.++.++++++.||.+.||..|+.++++|+++ +.+++++++++++|
T Consensus 311 ~~~~~------~~~~l~~~L~~~~gi~v~pg~~~~~~~~iRi~~a~~~~e~~~~~~~~l 363 (363)
T PF00155_consen 311 RLDPN------DAEELAQELLEEYGILVRPGSYFGVPGYIRISLASHSEEDLEEALERL 363 (363)
T ss_dssp EESHH------HHHHHHHHHHHHHTEEEEEGGGGTSTTEEEEEGGCSCHHHHHHHHHHH
T ss_pred Ecccc------hHHHHHHHHHHhCCEEEEecCCCCCCCEEEEEeccCCHHHHHHHHhhC
Confidence 88752 467888998877799999999999999999999 78999999999986
No 63
>PRK09257 aromatic amino acid aminotransferase; Provisional
Probab=100.00 E-value=5.7e-47 Score=358.86 Aligned_cols=348 Identities=20% Similarity=0.230 Sum_probs=272.3
Q ss_pred cceeEecccCCC-CCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcE--EEeCChHH
Q 014936 35 KKVISLAMGDPT-VHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDV--FVTSGCTQ 111 (415)
Q Consensus 35 ~~~i~l~~g~~~-~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i--~i~~g~~~ 111 (415)
.+++||+.|.|. ....++..+.+.+++.+.++......|+++.|.++||+++++|+.+..+..+++++| ++|+|+++
T Consensus 26 ~~~i~l~~g~~~~~~~~~p~~~~l~~a~~~~~~~~~~~~Y~~~~G~~~lR~aia~~~~~~~~~~~~~~~i~v~iT~Ga~~ 105 (396)
T PRK09257 26 PDKVNLGVGVYKDEQGRTPVLRAVKKAEARLLETETTKNYLPIEGLAAYRQAVQELLFGADSPALAAGRVATVQTPGGTG 105 (396)
T ss_pred cCcEecceeeEECCCCCEeccHHHHHHHHHhcccccCCCcCCCCCCHHHHHHHHHHhcCCCCcccccCeEEEEecCCccH
Confidence 468999999742 111133347899998887765455589999999999999999997654444578887 99999999
Q ss_pred HHHHHHHHh--cCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcC---CCceEEEecCCCCcc
Q 014936 112 AIDVAMALL--SRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLAD---QNTVALVIINPGNPC 186 (415)
Q Consensus 112 al~~~~~~l--~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~---~~~~~v~i~~p~npt 186 (415)
++.++++++ +++||+|++++|+|+.+...++..|++++.++....+++++|++.+++.++ +++.++++++|||||
T Consensus 106 al~~~~~~l~~~~pGd~Vlv~~P~y~~~~~~~~~~g~~~v~v~~~~~~~~~~d~~~l~~~~~~~~~~~~~~i~~~p~NPT 185 (396)
T PRK09257 106 ALRVGADFLKRAFPDAKVWVSDPTWPNHRAIFEAAGLEVKTYPYYDAATKGLDFDAMLADLSQAPAGDVVLLHGCCHNPT 185 (396)
T ss_pred HHHHHHHHHHHhCCCCeEEECCCCcccHHHHHHHcCCcEEEEeccccccCccCHHHHHHHHHhCCCCCEEEEeCCCCCCC
Confidence 999998766 489999999999999999999999999999987433457899999998875 335666779999999
Q ss_pred ccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccC-CCCcccccccC-CCCCeEEEccCccccCCCCceEEEEEe--eCC
Q 014936 187 GNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFG-DKPFVPMGVFG-STVPILTLGSLSKRWIVPGWRLGWFVT--TDP 262 (415)
Q Consensus 187 G~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~-~~~~~~~~~~~-~~~~~i~~~s~sK~~~~~G~r~G~~~~--~~~ 262 (415)
|.++|.+++++|+++|++||+++|+||+|..+.++ +....++..+. ..+++|+++||||.|+++|+|+||+++ +++
T Consensus 186 G~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~~~GlRiG~~~~~~~~~ 265 (396)
T PRK09257 186 GADLTPEQWDELAELLKERGLIPFLDIAYQGFGDGLEEDAYGLRAFAAAGLELLVASSFSKNFGLYGERVGALSVVAEDA 265 (396)
T ss_pred CCCCCHHHHHHHHHHHHhCCcEEEEeccccccccchHHHHHHHHHHHhcCCcEEEEEEcCCcCccccccceeEEEEeCCH
Confidence 99999999999999999999999999999998864 22233333333 235799999999999999999999984 221
Q ss_pred CCCCChHHHHHHHHhhc-cccCCchhHHHHHHHHhhCCCc-----HHHHHHHHHHHHHHHHHHHHHhhcCC---CCcCCC
Q 014936 263 CGMFRKPKVVERMKKYF-DILGDPATFIQAAVPSILQQPD-----EVFFKKTLNLLKQSVDICYNKIKEIP---CISCPH 333 (415)
Q Consensus 263 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~a~~~~l~~~~-----~~~~~~~~~~~~~~~~~l~~~l~~~~---~~~~~~ 333 (415)
... .++...+.... ....+++.+.|.++..+|.+.. ++++++.++.++++++.+.+.|+++. ++. +.
T Consensus 266 ~~~---~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~~~~rr~~l~~~L~~~~~~~~~~-~~ 341 (396)
T PRK09257 266 EEA---DRVLSQLKATIRTNYSNPPAHGAAIVATILNDPELRAEWEAELEEMRERIKAMRQLLVEALKAKGPSRDFD-FI 341 (396)
T ss_pred HHH---HHHHHHHHHHhhhhcCCCcHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcc-cc
Confidence 100 01333333332 2234568889999999997642 35677889999999999999999862 355 44
Q ss_pred CCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEee-CChhhHHHHHHHHHHH
Q 014936 334 KPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFA-VDPYSLEECLDRIKSF 404 (415)
Q Consensus 334 ~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~-~~~~~l~~~l~~l~~~ 404 (415)
.|.+|+|+|++++ .+++.++++++||.+.|. + ||+++ .+++++++++++|+++
T Consensus 342 ~p~gg~~~w~~l~----------~~~~~~l~~~~~V~~~p~------~--ri~~~~~~~~~i~~~~~~i~~~ 395 (396)
T PRK09257 342 ARQRGMFSYSGLT----------PEQVDRLREEFGVYAVGS------G--RINVAGLNESNIDYVAEAIAAV 395 (396)
T ss_pred cccceEEEecCCC----------HHHHHHHHHcCCEEEcCC------C--eEEEeeCCHHHHHHHHHHHHhh
Confidence 7999999998774 246677888999999873 2 99996 7999999999999875
No 64
>PRK06225 aspartate aminotransferase; Provisional
Probab=100.00 E-value=6.3e-46 Score=350.19 Aligned_cols=350 Identities=20% Similarity=0.298 Sum_probs=289.4
Q ss_pred cCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHH
Q 014936 33 NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQA 112 (415)
Q Consensus 33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~a 112 (415)
++.++|+|+.|.+. +++++.+.+++.+.+.......|+++.|.+++|+++|+++ ++++++|++|+|++++
T Consensus 26 ~~~~~i~l~~~~~~----~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l------~~~~~~v~~~~g~t~a 95 (380)
T PRK06225 26 KDKEMIWMGQNTNH----LGPHEEVREAMIRCIEEGEYCKYPPPEGFPELRELILKDL------GLDDDEALITAGATES 95 (380)
T ss_pred hcCCeEEccCCCCC----CCCCHHHHHHHHHHHhcCCCCCCCCCcchHHHHHHHHHhc------CCCCCcEEEeCCHHHH
Confidence 35679999999864 6778999999999987655668998889999999999998 5688899999999999
Q ss_pred HHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeecc-CCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCC
Q 014936 113 IDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLL-PDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYS 191 (415)
Q Consensus 113 l~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~-~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~ 191 (415)
+..++.+++++||+|++++|+|..+...++..|.+++.++++ .++++.+|++.+++.++++++++++++|+||||.+++
T Consensus 96 l~~~~~~~~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~~~~~~~~v~l~~p~NptG~~~~ 175 (380)
T PRK06225 96 LYLVMRAFLSPGDNAVTPDPGYLIIDNFASRFGAEVIEVPIYSEECNYKLTPELVKENMDENTRLIYLIDPLNPLGSSYT 175 (380)
T ss_pred HHHHHHHhcCCCCEEEEcCCCCcchHHHHHHhCceEEeeccccccCCccCCHHHHHhhcCCCceEEEEeCCCCCCCcCCC
Confidence 999999999999999999999999888889999999998864 3345789999999999888999999999999999999
Q ss_pred HHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHH
Q 014936 192 YQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKV 271 (415)
Q Consensus 192 ~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~ 271 (415)
.+++++|+++|+++|+++|+||+|..+..+. .+...+. .++++++.||||.|+++|+|+||+++++ ++
T Consensus 176 ~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~---~~~~~~~-~~~~i~~~s~SK~~g~~G~RiG~i~~~~--------~l 243 (380)
T PRK06225 176 EEEIKEFAEIARDNDAFLLHDCTYRDFAREH---TLAAEYA-PEHTVTSYSFSKIFGMAGLRIGAVVATP--------DL 243 (380)
T ss_pred HHHHHHHHHHHHHCCcEEEEehhHHHHhccC---CchhhcC-CCCEEEEeechhhcCCccceeEEEecCH--------HH
Confidence 9999999999999999999999998765321 1122222 2578999999999999999999999865 67
Q ss_pred HHHHHhhccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCccccC
Q 014936 272 VERMKKYFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLD 351 (415)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~~ 351 (415)
++.+........+.+.++|.++..+|... ..+.++.++.++++++.+.+.|++++++.+...|.+|+|+|+.++...
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~a~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~~-- 320 (380)
T PRK06225 244 IEVVKSIVINDLGTNVIAQEAAIAGLKVK-DEWIDRIRRTTFKNQKLIKEAVDEIEGVFLPVYPSHGNMMVIDISEAG-- 320 (380)
T ss_pred HHHHHHHHhcccCCCHHHHHHHHHHHhcc-hHHHHHHHHHHHHHHHHHHHHHHhCcCCccccCCCCCeEEEEEccccc--
Confidence 77776654334567888888888888642 466777778888889999999998767542335778889999886421
Q ss_pred CCCCHHHHHHHHHhhcCeEEEcCCCCCC---CCeEEEEeeCChhhHHHHHHHHHHHHHHHHH
Q 014936 352 DIIDDIDFCFKLAKEESVIILPGTAVGL---KNWLRVTFAVDPYSLEECLDRIKSFYQRHAK 410 (415)
Q Consensus 352 ~~~~~~~~~~~ll~~~gi~v~~g~~~~~---~~~iRi~~~~~~~~l~~~l~~l~~~~~~~~~ 410 (415)
.+..++...+. ++||.+.||..|+. ++++|++++.+++++++++++|++++++++.
T Consensus 321 --~~~~~l~~~l~-~~gi~v~~g~~~~~~~~~~~iR~s~~~~~e~l~~~~~~l~~~~~~~~~ 379 (380)
T PRK06225 321 --IDPEDLVEYLL-ERKIFVRQGTYTSKRFGDRYIRVSFSIPREQVEVFCEEFPDVVETLRT 379 (380)
T ss_pred --CCHHHHHHHHH-HCCEEEcCCcccCcCCCCceEEEEeCCCHHHHHHHHHHHHHHHHHhhc
Confidence 24667777765 67999999976643 4699999998899999999999999987664
No 65
>PRK09440 avtA valine--pyruvate transaminase; Provisional
Probab=100.00 E-value=1.9e-46 Score=358.07 Aligned_cols=384 Identities=21% Similarity=0.279 Sum_probs=287.9
Q ss_pred CccccCCccCCcchhhHHHHHHHhhhcccccccCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcC----CCCCCCCC
Q 014936 1 MEISNGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSE----KFNGYAPT 76 (415)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~----~~~~y~~~ 76 (415)
|.+|++|.++..- ..+......+.+.. ..+++++|+.|+|... ..+.+.+.+++++.+... ....|+++
T Consensus 1 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~----~~~~~i~l~~g~p~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~ 73 (416)
T PRK09440 1 MQFSKFGEKFTRH-SGITQLMDDLNDGL----RTPGAIMLGGGNPAHI--PEMEDYFRDLLADLLASGKLTEALGNYDGP 73 (416)
T ss_pred CchhHHHHHHHhh-hcHHHHHHHHHHHh----cCCCceeccCCCCCcc--CCHHHHHHHHHHHHhcCcccccccccCCCC
Confidence 6788888877665 24444444443333 2367899999998621 123456778887776542 23579999
Q ss_pred CCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcC-----CCCEEEE-cCCCCcchHHHHHhCCC----
Q 014936 77 AGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSR-----PGANILL-PRPGFPIYELSAAFRHI---- 146 (415)
Q Consensus 77 ~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~-----~gd~vi~-~~p~y~~~~~~~~~~g~---- 146 (415)
.|.++||++||+|+++.+|.++++++|++|+|+++++.+++.++++ +||.|++ +.|+|+.|...+...+.
T Consensus 74 ~G~~~LR~aia~~~~~~~g~~v~~~~I~it~Ga~~al~~~~~~l~~~~~~~~gd~v~i~~~P~y~~y~~~~~~~~~~~~~ 153 (416)
T PRK09440 74 QGKDELIEALAALLNERYGWNISPQNIALTNGSQSAFFYLFNLFAGRRADGSLKKILFPLAPEYIGYADAGLEEDLFVSY 153 (416)
T ss_pred CCCHHHHHHHHHHHHHHhCCCCChhhEEEccChHHHHHHHHHHHhccccCCCCCeEEEecCCCchhhHHHhhccCceeec
Confidence 9999999999999999889999999999999999999999999984 6899999 79999999886654432
Q ss_pred eEEEeeccCCC-CCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCc
Q 014936 147 EVRHFDLLPDK-GWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPF 225 (415)
Q Consensus 147 ~~~~~~~~~~~-~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~ 225 (415)
....+++..+. ++.+|++.++ ..++++++++++||||||.+++.+++++|+++|+++|+++|+||+|..+.... ..
T Consensus 154 ~~~~~~~~~~~~~~~~d~~~l~--~~~~~~~i~l~~P~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~Y~~~~~~~-~~ 230 (416)
T PRK09440 154 RPNIELLPEGQFKYHVDFEHLH--IDEDTGAICVSRPTNPTGNVLTDEELEKLDALARQHNIPLLIDNAYGPPFPGI-IF 230 (416)
T ss_pred ccccccccccccccCCCHHHcc--cCCCceEEEEecCCCCCCccCCHHHHHHHHHHHHHcCCcEEEeCCccccCCCc-ch
Confidence 12222332211 3678999987 35678899999999999999999999999999999999999999997532110 00
Q ss_pred ccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhhcc-ccCCchhHHHHHHHHhhCCCc-HH
Q 014936 226 VPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFD-ILGDPATFIQAAVPSILQQPD-EV 303 (415)
Q Consensus 226 ~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~a~~~~l~~~~-~~ 303 (415)
..... ...+++|+++||||. +++|+|+||+++++ ++++.+..... ...+++.+.|.++..+|++.. ..
T Consensus 231 ~~~~~-~~~~~vI~~~SfSK~-~~pGlRiG~~i~~~--------~l~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~ 300 (416)
T PRK09440 231 SEATP-LWNPNIILCMSLSKL-GLPGVRCGIVIADE--------EIIEALSNMNGIISLAPGRLGPAIAAEMIESGDLLR 300 (416)
T ss_pred hhcCc-cccCCeEEEeccccc-CCCcceEEEEeCCH--------HHHHHHHHHHHHhccCCCcHHHHHHHHHhccchHHH
Confidence 01101 114689999999996 99999999999865 67788776643 345678999999999998743 13
Q ss_pred HHHH-HHHHHHHHHHHHHHHhhc-CCC--CcCCCCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCC
Q 014936 304 FFKK-TLNLLKQSVDICYNKIKE-IPC--ISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGL 379 (415)
Q Consensus 304 ~~~~-~~~~~~~~~~~l~~~l~~-~~~--~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~ 379 (415)
+..+ .++.++++++.+.+.|++ +++ +. +..|.+|+|+|++++... .++.++...+ .++||.+.||+.|+.
T Consensus 301 ~~~~~~~~~~~~r~~~~~~~L~~~l~~~~~~-~~~p~gg~fiw~~~~~~~----~~~~~~~~~l-~~~gV~v~pg~~F~~ 374 (416)
T PRK09440 301 LSETVIRPFYRQKVQLAIALLRRYLPDEPCL-IHKPEGAIFLWLWFKDLP----ITTEELYQRL-KARGVLVVPGHYFFP 374 (416)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcccCCeE-EecCCCceEEEEECCCCC----CCHHHHHHHH-HHCCEEEechHhhCC
Confidence 3333 567778888888888875 333 33 347889999999987421 1456666654 678999999998843
Q ss_pred ---------CCeEEEEeeCChhhHHHHHHHHHHHHHHHHH
Q 014936 380 ---------KNWLRVTFAVDPYSLEECLDRIKSFYQRHAK 410 (415)
Q Consensus 380 ---------~~~iRi~~~~~~~~l~~~l~~l~~~~~~~~~ 410 (415)
.+++||+++.+++++++++++|++++++..+
T Consensus 375 ~~~~~~~~~~~~iRis~~~~~~~l~~~i~~l~~~~~~~~~ 414 (416)
T PRK09440 375 GLDEDWPHAHQCIRMNYVQDDEEIEKGIAILAEEVEKAYA 414 (416)
T ss_pred CCccccCCcCceEEEEecCCHHHHHHHHHHHHHHHHHHhh
Confidence 2589999987899999999999999987554
No 66
>PTZ00376 aspartate aminotransferase; Provisional
Probab=100.00 E-value=2.2e-46 Score=355.33 Aligned_cols=347 Identities=16% Similarity=0.192 Sum_probs=269.7
Q ss_pred CcceeEecccCC-CCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEE--EeCChH
Q 014936 34 EKKVISLAMGDP-TVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVF--VTSGCT 110 (415)
Q Consensus 34 ~~~~i~l~~g~~-~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~--i~~g~~ 110 (415)
+++++||+.|.| +..+...+.+.+.+++.+.+.......|+++.|.++||+++|+|+.+..+..+++++|+ .|+|++
T Consensus 28 ~~~~i~l~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~G~~~lR~aia~~~~~~~~~~~~~~~v~~~~t~G~~ 107 (404)
T PTZ00376 28 SPSKVNLGIGAYRDENGKPYVLESVRKAEKIIAEKNLDKEYLPIEGLQSFIEAAQKLLFGEASYALAEKRIATVQALSGT 107 (404)
T ss_pred CcccEecccceeECCCCCEehhhHHHHHHHHhccccCCCCCCCCCCCHHHHHHHHHHhcCCCccccccCeEEEeeccCcc
Confidence 457899999985 32222223455666655544334456899999999999999999965544457889998 499999
Q ss_pred HHHHHHHH---HhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcC---CCceEEEecCCCC
Q 014936 111 QAIDVAMA---LLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLAD---QNTVALVIINPGN 184 (415)
Q Consensus 111 ~al~~~~~---~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~---~~~~~v~i~~p~n 184 (415)
+++..++. +++++||+|++++|+|+.|...++..|++++.++..+++++++|++.+++.++ ++++++++++|||
T Consensus 108 ~al~~~~~~l~~~~~~Gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~l~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~~p~N 187 (404)
T PTZ00376 108 GALRLGFEFLKRFLPAGTTVYVSNPTWPNHVNIFKSAGLNVKEYRYYDPKTKGLDFDGMLEDLRTAPNGSVVLLHACAHN 187 (404)
T ss_pred hHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCceeeccccCcccCCcCHHHHHHHHHhCCCCCEEEEeCCCCC
Confidence 99988875 56799999999999999999999999999999998544568899999998874 3457778899999
Q ss_pred ccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCC--CcccccccC-CCCCeEEEccCccccCCCCceEEEEEe--
Q 014936 185 PCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDK--PFVPMGVFG-STVPILTLGSLSKRWIVPGWRLGWFVT-- 259 (415)
Q Consensus 185 ptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~--~~~~~~~~~-~~~~~i~~~s~sK~~~~~G~r~G~~~~-- 259 (415)
|||.+++.+++++|+++|++|++++|+||+|.++.+++. ...++..+. ..+++++++||||.|+++|+|+||+++
T Consensus 188 PTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~~~GlRvG~~~~~~ 267 (404)
T PTZ00376 188 PTGVDPTEEQWKEIADVMKRKNLIPFFDMAYQGFASGDLDKDAYAIRLFAERGVEFLVAQSFSKNMGLYGERIGALHIVC 267 (404)
T ss_pred CCCCCCCHHHHHHHHHHHHhCCcEEEEehhhcCccCCCHHHHHHHHHHHHhcCCcEEEEEeCCCcccccccccceEEEEe
Confidence 999999999999999999999999999999999888541 122233332 234799999999999999999999842
Q ss_pred eCCCCCCChHHHHH----HHHhhc-cccCCchhHHHHHHHHhhCCCc--H---HHHHHHHHHHHHHHHHHHHHhhcCC--
Q 014936 260 TDPCGMFRKPKVVE----RMKKYF-DILGDPATFIQAAVPSILQQPD--E---VFFKKTLNLLKQSVDICYNKIKEIP-- 327 (415)
Q Consensus 260 ~~~~~~~~~~~~~~----~~~~~~-~~~~~~~~~~~~a~~~~l~~~~--~---~~~~~~~~~~~~~~~~l~~~l~~~~-- 327 (415)
.+ +++.+ .+.... ....+.++++|.++..+|++.. + .++++.+++++++++.+.+.|++++
T Consensus 268 ~~-------~~~~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~ 340 (404)
T PTZ00376 268 AN-------KEEAANVLSQLKLIIRPMYSSPPIHGARIADRILSDPELRAEWLSELKEMSGRIQNMRQLLYDELKALGSP 340 (404)
T ss_pred CC-------HHHHHHHHHHHHHHHhhhcCCCchHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 22 23433 333322 2234457789999999997632 2 2355667789999999999999862
Q ss_pred -CCcCCCCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEee-CChhhHHHHHHHHHHHH
Q 014936 328 -CISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFA-VDPYSLEECLDRIKSFY 405 (415)
Q Consensus 328 -~~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~-~~~~~l~~~l~~l~~~~ 405 (415)
++. +..|.+|+|+|++++ .+++.+|++++||.+.|| + ||+++ .+.++++.++++|++++
T Consensus 341 ~~~~-~~~p~gg~f~~~~~~----------~~~~~~L~~~~~v~v~p~------~--Ris~~~~~~~~~~~~~~~l~~~~ 401 (404)
T PTZ00376 341 GDWE-HIINQIGMFSFTGLT----------KEQVERLIEKYHIYLLDN------G--RISVAGLTSKNVDYVAEAIHDVV 401 (404)
T ss_pred Cccc-ccccCceEEEecCCC----------HHHHHHHHHhCCEeecCC------C--eEEEeccCHHhHHHHHHHHHHHH
Confidence 244 347899999998763 467888988889999997 1 99996 89999999999999886
Q ss_pred H
Q 014936 406 Q 406 (415)
Q Consensus 406 ~ 406 (415)
.
T Consensus 402 ~ 402 (404)
T PTZ00376 402 R 402 (404)
T ss_pred h
Confidence 5
No 67
>PRK14809 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=3.6e-46 Score=348.93 Aligned_cols=328 Identities=20% Similarity=0.335 Sum_probs=274.7
Q ss_pred CcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHH
Q 014936 34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAI 113 (415)
Q Consensus 34 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al 113 (415)
+.++++|+.|++. +++++.+.+++.+.+.. ...|++ .|.++||+++|+++ ++++++|++|+|+++++
T Consensus 29 ~~~~i~l~~~~~~----~~~~~~~~~~~~~~~~~--~~~Y~~-~~~~~lr~~ia~~~------~~~~~~I~it~G~~~al 95 (357)
T PRK14809 29 PDDLVKLSSNENP----HGPSPAAVEAIREAAER--VHSYPK-ASHADLTAALADRW------DVSPEQVWLANGGDGAL 95 (357)
T ss_pred ccceeEecCCCCC----CCCCHHHHHHHHHHHhh--hhcCCC-CCHHHHHHHHHHHh------CCCcceEEECCCHHHHH
Confidence 5679999999865 66788899999887653 457876 68899999999998 57899999999999999
Q ss_pred HHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHH
Q 014936 114 DVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQ 193 (415)
Q Consensus 114 ~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~ 193 (415)
..++++++++||.|++++|+|..+...++..|.++..++++.++++.++++.+++.. ++++++++++||||||.++|.+
T Consensus 96 ~~~~~~~~~~gd~V~v~~P~y~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~~~-~~~k~i~l~~p~NPTG~~~s~~ 174 (357)
T PRK14809 96 DYLARAMLDPGDTVLVPDPGFAYYGMSARYHHGEVREYPVSKADDFEQTADTVLDAY-DGERIVYLTSPHNPTGSEIPLD 174 (357)
T ss_pred HHHHHHhcCCCCEEEEeCCChHHHHHHHHHcCCeEEEEecccCcCCCcCHHHHHHhh-cCCcEEEEeCCCCCCCcCCCHH
Confidence 999999999999999999999988888888999999998866567778888887765 3578999999999999999999
Q ss_pred HHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHH
Q 014936 194 HLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVE 273 (415)
Q Consensus 194 ~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~ 273 (415)
++++|+++|++ ++++|+||+|.++.+.+. .+..+...+++++++||||.|+++|+|+||+++++ ++++
T Consensus 175 ~~~~l~~~~~~-~~~iI~De~y~~~~~~~~---~~~~~~~~~~vi~~~SfSK~~~~~GlRiG~~~~~~--------~~~~ 242 (357)
T PRK14809 175 EVEALAERTDE-ETLVVVDEAYGEFAERPS---AVALVEERDDVAVLRTFSKAYGLAGLRLGYAVVPE--------EWAD 242 (357)
T ss_pred HHHHHHHhCcc-CcEEEEechhhhccCCch---hHHHHhhCCCEEEEecchhHhcCcchhheeeecCH--------HHHH
Confidence 99999999975 789999999999875432 22233445689999999999999999999999975 6778
Q ss_pred HHHhhccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCccccCCC
Q 014936 274 RMKKYFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLDDI 353 (415)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~~~~ 353 (415)
.+..... .+..+.++|.++..+|.+ +.++++.++.++++++.+.+.|+.. . .|.+|+|+|++++
T Consensus 243 ~~~~~~~-~~~~~~~~~~~a~~~l~~--~~~~~~~~~~~~~~r~~l~~~L~~~-----~-~~~~g~f~~~~~~------- 306 (357)
T PRK14809 243 AYARVNT-PFAASELACRAGLAALDD--DEHVERTVETARWAREYIREELDAP-----T-WESAGNFVLAEVG------- 306 (357)
T ss_pred HHHHhCC-CCCCCHHHHHHHHHHhCC--HHHHHHHHHHHHHHHHHHHHHhcCc-----c-CCCCCCEEEEECC-------
Confidence 7776543 456788888888888864 5788888999999999999888653 2 3678899999874
Q ss_pred CCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEeeCChhhHHHHHHHHHHHHH
Q 014936 354 IDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFAVDPYSLEECLDRIKSFYQ 406 (415)
Q Consensus 354 ~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~~~l~~~l~~l~~~~~ 406 (415)
+..++...+ .++||.+.||..|+.++++||+++. .+++++++++|+++++
T Consensus 307 -~~~~~~~~l-~~~gv~v~~g~~f~~~~~iRls~~~-~~~~~~~l~~L~~~l~ 356 (357)
T PRK14809 307 -DASAVAEAA-QERGVIVRDCTSFGLPECIRITCGT-REETERAVEVLNEVLA 356 (357)
T ss_pred -CHHHHHHHH-HHCCEEEEECccCCCCCeEEEecCC-HHHHHHHHHHHHHHhc
Confidence 356676664 6789999999999888999999974 6899999999988764
No 68
>PLN02672 methionine S-methyltransferase
Probab=100.00 E-value=6.3e-46 Score=373.29 Aligned_cols=355 Identities=14% Similarity=0.268 Sum_probs=285.2
Q ss_pred cCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCC-CcEEEeCChHH
Q 014936 33 NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTP-NDVFVTSGCTQ 111 (415)
Q Consensus 33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~-~~i~i~~g~~~ 111 (415)
.+.++++|+.|+|. +++++.+++++.+.+.... + ..|.+++++++++++++++|+..++ ++|++++|+++
T Consensus 695 ~g~~vI~LsinE~d----~ppPp~V~eAi~eal~~~~---~--s~g~pdlr~aLa~~la~~~Gv~~d~~e~IIvt~Gs~e 765 (1082)
T PLN02672 695 QESSLIHMDVDESF----LPVPSAVKASIFESFVRQN---I--SESETDPRPSILQFIKSNYGFPTDSCTEFVYGDTSLA 765 (1082)
T ss_pred CCCCEEEEeCCCCC----CCCCHHHHHHHHHHHhhcC---C--CCCChHHHHHHHHHHHHHhCcCCCCCCEEEEeCCHHH
Confidence 36789999999965 7889999999998775322 2 2356789999999999988988765 58999999999
Q ss_pred HHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCC-CceEEEecCCC-CccccC
Q 014936 112 AIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ-NTVALVIINPG-NPCGNV 189 (415)
Q Consensus 112 al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~v~i~~p~-nptG~~ 189 (415)
++..++.+++++||.|+++.|+|+.|...++..|++++.++.+++++|.+|++.+++++++ ..+++++++|+ ||||.+
T Consensus 766 lL~lll~aLl~pGD~VLVp~PtY~~Y~~~a~~~Ga~vv~Vpl~~e~gf~lD~d~Le~al~~~~~~~I~L~nPnhNPTG~v 845 (1082)
T PLN02672 766 LFNKLVLCCVQEGGTLCFPAGSNGTYVSAAKFLKANFRRIPTKSSDGFKLTAKTLASTLETVKKPWVYISGPTINPTGLL 845 (1082)
T ss_pred HHHHHHHHHcCCCCEEEEeCCChHHHHHHHHHcCCEEEEEecccccCCCCCHHHHHHHhccCCCCEEEEECcCCCCcCcc
Confidence 9999999999999999999999999999999999999999987667899999999999876 35689999997 999999
Q ss_pred CCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCc--cccc----ccCC---CCCeEEEccCccccCCCCceEEEEEee
Q 014936 190 YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPF--VPMG----VFGS---TVPILTLGSLSKRWIVPGWRLGWFVTT 260 (415)
Q Consensus 190 ~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~--~~~~----~~~~---~~~~i~~~s~sK~~~~~G~r~G~~~~~ 260 (415)
++.+++++|+++|++||++||+||+|.++.|++... .++. .++. ..++++++||||.|+++|+|+||++++
T Consensus 846 ~S~eeLe~Llela~k~di~VIsDEaYsdL~Fd~~~~s~~sl~s~l~~~~~~sks~nVIvL~SfSKkf~lpGLRIGylIap 925 (1082)
T PLN02672 846 YSNSEIEEILSVCAKYGARVIIDTSFSGLEYDTSGWGGWDLKSILSRLKSSNPSFAVALLGGLSTELLSGGHEFGFLALN 925 (1082)
T ss_pred CCHHHHHHHHHHHHHcCCEEEEeCCCCccccCCCCCcccchhhHHHHhccccCCceEEEEeCcHHhhccHHHHheeEEeC
Confidence 999999999999999999999999999988875431 1111 1111 237999999999999999999999986
Q ss_pred CCCCCCChHHHHHHHHhhccccCCchhHHHHHHH---HhhC--CCc-HHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCC
Q 014936 261 DPCGMFRKPKVVERMKKYFDILGDPATFIQAAVP---SILQ--QPD-EVFFKKTLNLLKQSVDICYNKIKEIPCISCPHK 334 (415)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~---~~l~--~~~-~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~ 334 (415)
+ +++++.+...... ..+....|.++. .++. ... ..++.+.++.++++++++.+.|+++ ++. +..
T Consensus 926 ~-------~eLi~~l~~~~~~-s~~~~~~q~Aaaaalall~~~~~~~~~~l~e~r~~Lk~rRd~L~e~L~~~-Gi~-v~~ 995 (1082)
T PLN02672 926 D-------SVLIDAFHSAPGL-SRPHSTLKYTIKKLLGLKNQKSSDLLDGVAEQKKILKSRAERLKETLEAC-GWD-VLE 995 (1082)
T ss_pred C-------HHHHHHHHHhhhh-cCCCcHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHHHHHHHHC-CCe-Eec
Confidence 5 1377777664321 222223343333 3332 111 3567788888999999999999988 777 558
Q ss_pred CCCceEEEEecCccc-------cC----C-CCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEeeCChhhHHHHHHHHH
Q 014936 335 PEGSMAVMLKLNLSL-------LD----D-IIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFAVDPYSLEECLDRIK 402 (415)
Q Consensus 335 p~~g~~~~~~l~~~~-------~~----~-~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~~~l~~~l~~l~ 402 (415)
|++|+|+|++++... .+ + ..++.++...++++.||.+.||..|+.++++||+++.+++++++++++|+
T Consensus 996 PeGGFfLwl~l~~~l~~~~~~~~~~~~~~~~lds~efae~LLee~GVaV~PGs~FG~~g~~RIsfa~~~e~LeeALerL~ 1075 (1082)
T PLN02672 996 PQGGISMVAKPSAYLGKTVKLKSIDGDTGIKLDSSNIREAILKSTGLCINSSSWTGIPGYCRFSFALEDSEFDRALKAIA 1075 (1082)
T ss_pred CCcEEEEEEEccccccccccccccccccccCCCHHHHHHHHHHcCCEEEecCcccCCCCeEEEEecCCHHHHHHHHHHHH
Confidence 999999999764210 00 0 12577899999888899999999888889999999999999999999999
Q ss_pred HHHH
Q 014936 403 SFYQ 406 (415)
Q Consensus 403 ~~~~ 406 (415)
++.+
T Consensus 1076 kf~~ 1079 (1082)
T PLN02672 1076 RFKE 1079 (1082)
T ss_pred HHHH
Confidence 8654
No 69
>TIGR03539 DapC_actino succinyldiaminopimelate transaminase. This family of actinobacterial succinyldiaminopimelate transaminase enzymes (DapC) are members of the pfam00155 superfamily. Many of these genes appear adjacent to other genes encoding enzymes of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=100.00 E-value=2.1e-45 Score=343.29 Aligned_cols=331 Identities=21% Similarity=0.303 Sum_probs=271.4
Q ss_pred ccCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCC-CCCCcEEEeCChH
Q 014936 32 KNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYK-LTPNDVFVTSGCT 110 (415)
Q Consensus 32 ~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~-~~~~~i~i~~g~~ 110 (415)
.++..+++|+.|+|. +++++.+.+++.+... ...|+++.|.++||+++++++.+++|.. +++++|++|+|++
T Consensus 18 ~~~~~~i~l~~~~p~----~~~~~~~~~~~~~~~~---~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~~I~it~G~~ 90 (357)
T TIGR03539 18 SHPDGIVDLSVGTPV----DPVPPLIRAALAAAAD---APGYPQTWGTPELREAIVDWLERRRGVPGLDPTAVLPVIGTK 90 (357)
T ss_pred hCCCCeEEccCCCCC----CCCCHHHHHHHHHHHh---hCCCCcccCCHHHHHHHHHHHHHhcCCCCCCcCeEEEccChH
Confidence 346778999999875 5567888888877643 3579999999999999999999988886 9999999999999
Q ss_pred HHHHHHHHHh-cCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccC
Q 014936 111 QAIDVAMALL-SRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNV 189 (415)
Q Consensus 111 ~al~~~~~~l-~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~ 189 (415)
+++..++..+ .++||.|++++|+|+.+...++..|++++.++ +++.+. .++++++++++|+||||.+
T Consensus 91 ~~i~~~~~~l~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~---------~~~~l~---~~~~~~v~~~~p~NPtG~~ 158 (357)
T TIGR03539 91 ELVAWLPTLLGLGPGDTVVIPELAYPTYEVGALLAGATPVAAD---------DPTELD---PVGPDLIWLNSPGNPTGRV 158 (357)
T ss_pred HHHHHHHHHHcCCCCCEEEECCCCcHHHHHHHHhcCCEEeccC---------ChhhcC---ccCccEEEEeCCCCCcCcc
Confidence 9999998887 69999999999999999999999999887663 222222 2468899999999999999
Q ss_pred CCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCccccccc---CCCCCeEEEccCccccCCCCceEEEEEeeCCCCCC
Q 014936 190 YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVF---GSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMF 266 (415)
Q Consensus 190 ~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~---~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~ 266 (415)
++.+++++|+++|+++|+++|+||+|.++.+++.....+... ...+++++++||||.|+++|+|+||+++++
T Consensus 159 ~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~~G~R~G~~i~~~----- 233 (357)
T TIGR03539 159 LSVDELRAIVAWARERGAVVASDECYLELGWEGRPVSILDPRVCGGDHTGLLAVHSLSKRSNLAGYRAGFVAGDP----- 233 (357)
T ss_pred CCHHHHHHHHHHHHHcCeEEEEecchhhhccCCCCccceecccCCCccccEEEEeccccccCCCceeEEEEecCH-----
Confidence 999999999999999999999999999888765322222110 123578999999999999999999999764
Q ss_pred ChHHHHHHHHhhcc-ccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEec
Q 014936 267 RKPKVVERMKKYFD-ILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKL 345 (415)
Q Consensus 267 ~~~~~~~~~~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l 345 (415)
++++.+..... ...+++.+.|.++..+|++ ..++++.++.++++++++.+.|++. ++. +..|.+|+|+|+++
T Consensus 234 ---~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~--~~~~~~~~~~~~~~~~~~~~~L~~~-g~~-~~~p~~~~~~~~~~ 306 (357)
T TIGR03539 234 ---ALVAELLTVRKHAGLMVPAPVQAAMVAALGD--DGHVAEQKARYAARRAQLKPALEKA-GFR-IDHSEAGLYLWATR 306 (357)
T ss_pred ---HHHHHHHHHHhhcccCCCHHHHHHHHHHcCC--HHHHHHHHHHHHHHHHHHHHHHHHc-CCC-CcCCCccEEEEEEC
Confidence 67777765543 2456788899999999865 4677888899999999999999987 677 55788999999987
Q ss_pred CccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCC--CCeEEEEeeCChhhHHHHHHHH
Q 014936 346 NLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGL--KNWLRVTFAVDPYSLEECLDRI 401 (415)
Q Consensus 346 ~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~--~~~iRi~~~~~~~~l~~~l~~l 401 (415)
+. +..++... |.++||.+.||..|+. ++++||+++.+++++++++++|
T Consensus 307 ~~-------~~~~~~~~-l~~~gV~v~pg~~f~~~~~~~iRis~~~~~~~i~~~~~~l 356 (357)
T TIGR03539 307 GE-------DAWDTVDR-LAELGILVAPGDFYGPAGSQHVRVALTATDERIAAAVARL 356 (357)
T ss_pred CC-------CHHHHHHH-HHhCCEEECCccccCCCCCCeEEEEecCCHHHHHHHHHhh
Confidence 52 34556555 4678999999998764 5799999988889999999876
No 70
>PRK01533 histidinol-phosphate aminotransferase; Validated
Probab=100.00 E-value=2.2e-46 Score=349.63 Aligned_cols=328 Identities=20% Similarity=0.295 Sum_probs=273.5
Q ss_pred CcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHH
Q 014936 34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAI 113 (415)
Q Consensus 34 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al 113 (415)
++++++|+.|.+. +++++.+++++.+.+.. ...|++ .|.++||++||+++ ++++++|++|+|+++++
T Consensus 28 ~~~~i~l~~nen~----~~~~~~v~~a~~~~~~~--~~~Yp~-~g~~~Lr~aia~~~------~~~~~~I~vt~Gs~e~i 94 (366)
T PRK01533 28 DHSFVKLASNENP----FGCSPRVLDELQKSWLD--HALYPD-GGATTLRQTIANKL------HVKMEQVLCGSGLDEVI 94 (366)
T ss_pred CCceEEeCCCCCC----CCCCHHHHHHHHHHHHh--cCcCCC-CCHHHHHHHHHHHh------CCCcceEEECCCHHHHH
Confidence 5688999999864 78889999999887654 335765 68899999999998 57899999999999999
Q ss_pred HHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHH
Q 014936 114 DVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQ 193 (415)
Q Consensus 114 ~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~ 193 (415)
..++.+++++||+|++++|+|+.|...++..|+++..++.+ ++.+|++.++++++++++++++++||||||.+++.+
T Consensus 95 ~~~~~~l~~~gd~vlv~~P~y~~~~~~~~~~g~~v~~v~~~---~~~~d~~~l~~~~~~~~~~v~i~~P~NPTG~~~~~~ 171 (366)
T PRK01533 95 QIISRAVLKAGDNIVTAGATFPQYRHHAIIEGCEVKEVALN---NGVYDLDEISSVVDNDTKIVWICNPNNPTGTYVNDR 171 (366)
T ss_pred HHHHHHhcCCCCEEEEcCCcHHHHHHHHHHcCCEEEEeecC---CCCcCHHHHHHHhCcCCcEEEEeCCCCCCCCCcCHH
Confidence 99999999999999999999999999999999999999873 346899999999888899999999999999999999
Q ss_pred HHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHH
Q 014936 194 HLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVE 273 (415)
Q Consensus 194 ~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~ 273 (415)
++++|+++|++++ ++|+||+|.++.+.+.....+..+...+++|+++||||.|+++|+|+||+++++ ++++
T Consensus 172 ~l~~l~~~~~~~~-~~iiDe~y~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~l~GlRiG~~i~~~--------~~~~ 242 (366)
T PRK01533 172 KLTQFIEGISENT-LIVIDEAYYEYVTAKDFPETLPLLEKHKNILVLRTFSKAYGLASFRVGYAVGHE--------ELIE 242 (366)
T ss_pred HHHHHHHhCCCCC-EEEEEccHHHhhccccCcchhHHhccCCCEEEEeCchHHhcChHHHHhHHhCCH--------HHHH
Confidence 9999999998876 577899999877653222233334455789999999999999999999999864 6888
Q ss_pred HHHhhccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCccccCCC
Q 014936 274 RMKKYFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLDDI 353 (415)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~~~~ 353 (415)
.+..... .++.+.++|.++..+|++ ..+.++.++..+++++.+.+.++.+ ++. + .+..|+|+|++++
T Consensus 243 ~l~~~~~-~~~~~~~~q~aa~~~l~~--~~~~~~~~~~~~~~r~~~~~~l~~~-g~~-~-~~~~~nf~~~~~~------- 309 (366)
T PRK01533 243 KLNVVRL-PFNVSSLAQKAATIAFGD--DEFIEEIVRVNTEGLRQYESFCKEN-EIP-F-YQSQTNFIFLPVE------- 309 (366)
T ss_pred HHHHhcC-CCCcCHHHHHHHHHHhCC--HHHHHHHHHHHHHHHHHHHHHHHhC-CCc-c-CCCcCcEEEEeCC-------
Confidence 8877653 467899999999999975 5778888888889999999999887 777 4 4557889999875
Q ss_pred CCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEeeCChhhHHHHHHHHHHHHHH
Q 014936 354 IDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFAVDPYSLEECLDRIKSFYQR 407 (415)
Q Consensus 354 ~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~~~l~~~l~~l~~~~~~ 407 (415)
+..++...+ .++||.|++ | ++++||+++.. ++.+.+++.|+++++.
T Consensus 310 -~~~~~~~~l-~~~GI~Vr~---~--~~~iRis~~~~-~~~~~l~~al~~~~~~ 355 (366)
T PRK01533 310 -NGGEIYEAC-AHAGFIIRP---F--PNGVRITVGTR-EQNEGVISVLQQHFEN 355 (366)
T ss_pred -CHHHHHHHH-HHCCcEEcc---C--CCceEEeCCCH-HHHHHHHHHHHHHHHh
Confidence 345666665 568999997 3 58899998654 6678888888877654
No 71
>PLN02368 alanine transaminase
Probab=100.00 E-value=9.9e-47 Score=354.02 Aligned_cols=309 Identities=25% Similarity=0.430 Sum_probs=253.3
Q ss_pred cCcceeEecccCCCCC----CCC----------------------CCcHHHHHHHHHHHh-cCCCCCCCCCCCcHHHHHH
Q 014936 33 NEKKVISLAMGDPTVH----SCF----------------------HTTHVATEAVAEALL-SEKFNGYAPTAGLPLTRRA 85 (415)
Q Consensus 33 ~~~~~i~l~~g~~~~~----~~~----------------------~~~~~~~~a~~~~~~-~~~~~~y~~~~g~~~lr~~ 85 (415)
.+.++|+|+.|+|+.. .++ .+++.+.+++..... .+....|+++.|.++||++
T Consensus 36 ~g~~vi~l~iG~Pd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p~~~i~~a~~~l~~~~~~~~~Y~~~~G~~~LR~a 115 (407)
T PLN02368 36 EGKKIIFTNVGNPHALGQKPLTFPRQVVALCQAPFLLDDPNVGLLFPADAIARAKHYLSLTSGGLGAYSDSRGLPGVRKE 115 (407)
T ss_pred HhhhhhcccCCChhHcCCCCchHHHHHHHHhcCchhcCCccccccCCHHHHHHHHHHHhcCCCCCCCCCCCCCCHHHHHH
Confidence 4789999999998621 012 255666666554322 2345689999999999999
Q ss_pred HHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhc-CCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChh
Q 014936 86 IAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLS-RPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLD 164 (415)
Q Consensus 86 ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~-~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 164 (415)
||+|+++.+|..+++++|++|+|+++++..++.+++ ++||.|++++|+|+.|...++..|.+++.++.+.+++|.+|++
T Consensus 116 ia~~~~~~~g~~~~~~~I~it~Ga~~al~~~~~~l~~~pGd~Vli~~P~Y~~y~~~~~~~g~~~v~v~~~~~~~~~~d~~ 195 (407)
T PLN02368 116 VAEFIERRDGYPSDPELIFLTDGASKGVMQILNAVIRGEKDGVLVPVPQYPLYSATISLLGGTLVPYYLEESENWGLDVN 195 (407)
T ss_pred HHHHHHHhcCCCCChhhEEEcccHHHHHHHHHHHHcCCCCCEEEEeCCCCccHHHHHHHcCCEEEEEecccccCCCCCHH
Confidence 999999888888999999999999999999999987 7999999999999999999999999999999877777899999
Q ss_pred HHHhhcCC------CceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCC-Cccccccc----C-
Q 014936 165 DIESLADQ------NTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDK-PFVPMGVF----G- 232 (415)
Q Consensus 165 ~l~~~~~~------~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~-~~~~~~~~----~- 232 (415)
.+++.+++ +++++++++||||||.+++.+++++|+++|++||++||+||+|.++.|++. .+.++..+ +
T Consensus 196 ~le~~i~~~~~~~~~~k~l~l~nP~NPTG~v~s~e~l~~l~~~a~~~~~~II~DE~Y~~l~y~~~~~~~s~~~~~~~~~~ 275 (407)
T PLN02368 196 NLRQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILKFCYQERLVLLGDEVYQQNIYQDERPFISAKKVLMDMGP 275 (407)
T ss_pred HHHHHHHHHhhcCCCeEEEEEECCCCCCCccCCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCcccHHHHHhhhcc
Confidence 99998864 678999999999999999999999999999999999999999999998764 33343222 1
Q ss_pred ---CCCCeEEEccCcccc-CCCCceEEEEEeeCCCCCCChHHHHHHHHhhccccCCchhHHHHHHHHhhCCCc------H
Q 014936 233 ---STVPILTLGSLSKRW-IVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQAAVPSILQQPD------E 302 (415)
Q Consensus 233 ---~~~~~i~~~s~sK~~-~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~------~ 302 (415)
..+++|+++||||.| +++|+|+||+++.+. .+++++.+.......++++.++|.++..+|.... +
T Consensus 276 ~~~~~~~vI~~~SfSK~~~~~~GlRiGy~i~~~~-----~~~li~~~~~~~~~~~~~~~~~Q~aa~~~l~~~~~~~~~~~ 350 (407)
T PLN02368 276 PISKEVQLVSFHTVSKGYWGECGQRGGYFEMTNI-----PPKTVEEIYKVASIALSPNVSGQIFMGLMVNPPKPGDISYD 350 (407)
T ss_pred cccccceEEEEecCCcccccCCccceEEEEEeCC-----CHHHHHHHHHHhcccCCCCcHHHHHHHHHhCCCCCCCccHH
Confidence 234899999999998 799999999995210 1257787777643456788899999999997531 1
Q ss_pred HHH---HHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCc
Q 014936 303 VFF---KKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNL 347 (415)
Q Consensus 303 ~~~---~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~ 347 (415)
.+. +++.+.++++++.+.+.|+++|++. +..|+||+|+|++++.
T Consensus 351 ~~~~~~~~~~~~~~~rr~~~~~~L~~~~g~~-~~~P~Gafy~~~~i~l 397 (407)
T PLN02368 351 QFVRESKGILESLRRRARMMTDGFNSCKNVV-CNFTEGAMYSFPQIKL 397 (407)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCCeE-eCCCCeeeEeccCCCC
Confidence 233 4567899999999999999998988 4589999999987753
No 72
>PRK02610 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=1e-45 Score=347.35 Aligned_cols=335 Identities=20% Similarity=0.295 Sum_probs=271.2
Q ss_pred ceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCC-CCCCCCCCCcHHHHHHHHHHHhhhC--CCCCCCCcEEEeCChHHH
Q 014936 36 KVISLAMGDPTVHSCFHTTHVATEAVAEALLSEK-FNGYAPTAGLPLTRRAIAEYLSRDL--PYKLTPNDVFVTSGCTQA 112 (415)
Q Consensus 36 ~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~-~~~y~~~~g~~~lr~~ia~~~~~~~--~~~~~~~~i~i~~g~~~a 112 (415)
.+++|+.|+|. +++++.+++++.+.+.... ...|++ .|.++||++||+|+++.+ ++.+++++|++|+|++++
T Consensus 29 ~~~~l~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~Y~~-~G~~~Lr~aia~~~~~~~~~~~~v~~~~I~it~Ga~~a 103 (374)
T PRK02610 29 QLDRLDTNEFP----YDLPPDLKQKLAWLYQQGIESNRYPD-GGHEALKQAIAEYVNESAAGSSQITPANISVGNGSDEL 103 (374)
T ss_pred ceeEecCCCCC----CCCCHHHHHHHHHHHhhcccccCCCC-CchHHHHHHHHHHhCccccccCCCCHHHEEEcCChHHH
Confidence 47999999864 7788999999998776532 357876 699999999999998766 466899999999999999
Q ss_pred HHHHHHHhcCCCC-EEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcC----CCceEEEecCCCCccc
Q 014936 113 IDVAMALLSRPGA-NILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLAD----QNTVALVIINPGNPCG 187 (415)
Q Consensus 113 l~~~~~~l~~~gd-~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~----~~~~~v~i~~p~nptG 187 (415)
+..++.+++.+|| +|++++|+|..+...++..|++++.++.+. +++++|+++++++++ ++++++++++||||||
T Consensus 104 l~~~~~~~~~~g~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~~~~-~~~~~d~~~l~~~~~~~~~~~~k~i~l~~P~NPTG 182 (374)
T PRK02610 104 IRSLLIATCLGGEGSILVAEPTFSMYGILAQTLGIPVVRVGRDP-ETFEIDLAAAQSAIEQTQNPPVRVVFVVHPNSPTG 182 (374)
T ss_pred HHHHHHHHcCCCCCeEEEcCCChHHHHHHHHHcCCEEEEecCCc-ccCCCCHHHHHHHHHhhcCCCceEEEEeCCCCCCC
Confidence 9988888777886 899999999999999999999999998753 457899999998876 4789999999999999
Q ss_pred cCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCC
Q 014936 188 NVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFR 267 (415)
Q Consensus 188 ~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~ 267 (415)
.+++.+++++|+++|+ |+++|+||+|..+.+. ..+..+...+++|+++||||.|+++|+|+||+++++
T Consensus 183 ~~~s~~~l~~l~~~~~--~~~iI~De~Y~~~~~~----~~~~~~~~~~~~ivi~SfSK~~g~~GlRiG~~v~~~------ 250 (374)
T PRK02610 183 NPLTAAELEWLRSLPE--DILVVIDEAYFEFSQT----TLVGELAQHPNWVILRTFSKAFRLAAHRVGYAIGHP------ 250 (374)
T ss_pred CCCCHHHHHHHHhccC--CcEEEEeccccccCcc----chHHHHhcCCCEEEEEecchhccCcccceeeeecCH------
Confidence 9999999999999874 8999999999987532 122233344578999999999999999999999864
Q ss_pred hHHHHHHHHhhccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCc
Q 014936 268 KPKVVERMKKYFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNL 347 (415)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~ 347 (415)
++++.+..... .++.+.+.|.++..++++. +.+.+..++.+ +.++.+.+.|++++++. + .|.+|+|+|++++.
T Consensus 251 --~l~~~l~~~~~-~~~~~~~~q~a~~~~l~~~-~~~~~~~~~~~-~~r~~l~~~L~~~~~~~-~-~p~~g~f~~~~l~~ 323 (374)
T PRK02610 251 --ELIAVLEKVRL-PYNLPSFSQLAAQLALEHR-QELLAAIPEIL-QERDRLYQALQELPQLR-V-WPSAANFLYLRLSQ 323 (374)
T ss_pred --HHHHHHHHhcC-CCCCCHHHHHHHHHHhcCH-HHHHHHHHHHH-HHHHHHHHHHHhCCCcE-e-CCCcceEEEEeCCC
Confidence 67888776653 3567888999999888753 45555555444 45777888998887776 4 68899999999874
Q ss_pred cccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEeeCChhhHHHHHHHHHHHHHH
Q 014936 348 SLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFAVDPYSLEECLDRIKSFYQR 407 (415)
Q Consensus 348 ~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~~~l~~~l~~l~~~~~~ 407 (415)
. .+..++...+ .++||.+.++ ++++||+++.+ +++++++++|++++.+
T Consensus 324 ~-----~~~~~~~~~l-~~~gi~v~~~-----~~~lRls~~~~-~~~~~~l~~l~~~l~~ 371 (374)
T PRK02610 324 D-----AALAALHQAL-KAQGTLVRHT-----GGGLRITIGTP-EENQRTLERLQAALTQ 371 (374)
T ss_pred C-----CCHHHHHHHH-HHCCEEEEeC-----CCeEEEeCCCH-HHHHHHHHHHHHHHhh
Confidence 2 2456666664 6789999764 47899999864 5689999999988764
No 73
>PRK06358 threonine-phosphate decarboxylase; Provisional
Probab=100.00 E-value=1.8e-45 Score=342.97 Aligned_cols=333 Identities=20% Similarity=0.329 Sum_probs=272.4
Q ss_pred cceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHH
Q 014936 35 KKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAID 114 (415)
Q Consensus 35 ~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~ 114 (415)
.++++|+.|.+. .++++.+++++.+.+. ....|+++ +.++||+++|+|+ ++++++|++|+|+++++.
T Consensus 19 ~~~~~l~~~~~~----~~~p~~~~~a~~~~~~--~~~~Y~~~-~~~~lr~~ia~~~------~~~~~~i~it~Ga~~~l~ 85 (354)
T PRK06358 19 NMILDFSANINP----LGVPESLKQAITENLD--KLVEYPDP-DYLELRKRIASFE------QLDLENVILGNGATELIF 85 (354)
T ss_pred cceEEecCCCCC----CCCCHHHHHHHHHHHH--hhhcCCCc-cHHHHHHHHHHHh------CCChhhEEECCCHHHHHH
Confidence 457999999754 4557889999988764 35578874 6899999999998 579999999999999999
Q ss_pred HHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHH
Q 014936 115 VAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQH 194 (415)
Q Consensus 115 ~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~ 194 (415)
.++.++ .+ ++|+++.|+|+.+...++..|+++..++.+.++++.+| +++.+.+..+++++++++||||||.+++.++
T Consensus 86 ~~~~~~-~~-~~v~i~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d-~~~~~~~~~~~~~v~~~~P~NPtG~~~~~~~ 162 (354)
T PRK06358 86 NIVKVT-KP-KKVLILAPTFAEYERALKAFDAEIEYAELTEETNFAAN-EIVLEEIKEEIDLVFLCNPNNPTGQLISKEE 162 (354)
T ss_pred HHHHHh-CC-CcEEEecCChHHHHHHHHHcCCeeEEEeCccccCCCcc-HHHHHhhccCCCEEEEeCCCCCCCCccCHHH
Confidence 999987 44 68999999999999999999999999998766677888 6666666667899999999999999999999
Q ss_pred HHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHHH
Q 014936 195 LQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVER 274 (415)
Q Consensus 195 l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~ 274 (415)
+++|+++|+++|+++|+||+|.++.+++.....+..++..+++|+++||||.|+++|+|+||+++++ +.+++.
T Consensus 163 ~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RiG~lv~~~-------~~~~~~ 235 (354)
T PRK06358 163 MKKILDKCEKRNIYLIIDEAFMDFLEENETISMINYLENFKNLIIIRAFTKFFAIPGLRLGYGLTSN-------KNLAEK 235 (354)
T ss_pred HHHHHHHHHhcCCEEEEeCcccccCCCccchhHHHhccCCCCEEEEEechhhccCcchhheeeecCC-------HHHHHH
Confidence 9999999999999999999999998876433334445556789999999999999999999999854 246677
Q ss_pred HHhhccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCccccCCCC
Q 014936 275 MKKYFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLDDII 354 (415)
Q Consensus 275 ~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~~~~~ 354 (415)
+..... .++.+.++|.++..+|++ ..++++.++.++++++.+.+.|++++++. +..| .|.|+|++++.
T Consensus 236 ~~~~~~-~~~~~~~~q~~~~~~l~~--~~~~~~~~~~~~~~r~~l~~~L~~~~~~~-~~~~-~g~f~~~~~~~------- 303 (354)
T PRK06358 236 LLQMRE-PWSINTFADLAGQTLLDD--KEYIKKTIQWIKEEKDFLYNGLSEFKGIK-VYKP-SVNFIFFKLEK------- 303 (354)
T ss_pred HHHhCC-CCcchHHHHHHHHHHhcc--HHHHHHHHHHHHHHHHHHHHHHhcCCCcE-EcCC-cceEEEEEcCc-------
Confidence 766544 467788899999999964 46778889999999999999999887776 4345 56699998863
Q ss_pred CHHHHHHHHHhhcCeEEEcCCCCCC--CCeEEEEeeCChhhHHHHHHHHHHHH
Q 014936 355 DDIDFCFKLAKEESVIILPGTAVGL--KNWLRVTFAVDPYSLEECLDRIKSFY 405 (415)
Q Consensus 355 ~~~~~~~~ll~~~gi~v~~g~~~~~--~~~iRi~~~~~~~~l~~~l~~l~~~~ 405 (415)
..++...++ ++||.+.||+.|+. ++++||+++.+ ++.+.+++.|.+++
T Consensus 304 -~~~~~~~l~-~~gI~v~~~~~f~~~~~~~iRls~~~~-~~~~~l~~~l~~~~ 353 (354)
T PRK06358 304 -PIDLRKELL-KKGILIRSCSNYRGLDENYYRVAVKSR-EDNKKLLKALEVIL 353 (354)
T ss_pred -hHHHHHHHH-HCCeEEEECCCCCCCCCCEEEEEeCCH-HHHHHHHHHHHHHh
Confidence 467777765 57999999999853 57899998653 45566676666543
No 74
>PRK03158 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=6.6e-46 Score=347.75 Aligned_cols=331 Identities=21% Similarity=0.308 Sum_probs=277.2
Q ss_pred CcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHH
Q 014936 34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAI 113 (415)
Q Consensus 34 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al 113 (415)
...+++|+.|.+. +++++.+.+++.+.+.. . .|.+..|.+++|+++|+++ ++++++|++|+|+++++
T Consensus 28 ~~~~i~l~~n~~~----~~~~~~v~~a~~~~~~~--~-~~~p~~g~~~lr~~ia~~~------~~~~~~i~~t~G~~~~l 94 (359)
T PRK03158 28 LEKIVKLASNENP----YGPSPKVKEAIAAHLDE--L-ALYPDGYAPELRTKVAKHL------GVDEEQLLFGAGLDEVI 94 (359)
T ss_pred CCceEEecCCCCC----CCCCHHHHHHHHHHHHH--h-hcCCCCcHHHHHHHHHHHh------CCCHHHEEECCCHHHHH
Confidence 3478999999864 56688899999887753 3 3444578999999999998 56789999999999999
Q ss_pred HHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHH
Q 014936 114 DVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQ 193 (415)
Q Consensus 114 ~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~ 193 (415)
..++.+++++||+|++++|+|+.+...+...|.++..++.+ ++.+|++.+++.++++++++++++|+||||.+++.+
T Consensus 95 ~~~~~~~~~~gd~v~~~~p~y~~~~~~~~~~g~~~~~~~~~---~~~~d~~~l~~~~~~~~~~v~i~~p~NPtG~~~~~~ 171 (359)
T PRK03158 95 QMISRALLNPGTNTVMAEPTFSQYRHNAIIEGAEVREVPLK---DGGHDLEAMLKAIDEQTKIVWICNPNNPTGTYVNHE 171 (359)
T ss_pred HHHHHHHhCCCCEEEEcCCCHHHHHHHHHHcCCeEEEEecC---CCCcCHHHHHHhcCCCCCEEEEeCCCCCCCCCCCHH
Confidence 99999999999999999999999999999999999999874 356899999998888899999999999999999999
Q ss_pred HHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHH
Q 014936 194 HLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVE 273 (415)
Q Consensus 194 ~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~ 273 (415)
++.++++.|+ +|+++|+||+|.++.+.+.....+...+..+++++++||||.|+++|+|+||+++++ ++++
T Consensus 172 ~l~~~~~~~~-~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~~v~~~--------~~~~ 242 (359)
T PRK03158 172 ELLSFLESVP-SHVLVVLDEAYYEYVTAEDYPDTLPLLEKYENLIVLRTFSKAYGLAALRVGYGIASE--------ELIE 242 (359)
T ss_pred HHHHHHHhCC-CCcEEEEECchHhhcCCcccccHHHHHHhcCCEEEEEechHhhcCcchhhehhcCCH--------HHHH
Confidence 9999999875 699999999999988765333333334445689999999999999999999999865 6788
Q ss_pred HHHhhccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCccccCCC
Q 014936 274 RMKKYFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLDDI 353 (415)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~~~~ 353 (415)
.+..... .+..+.++|.++..+|++ .+++++.++.++++++.+.+.|+++ ++. + .|.+|+|+|++++.
T Consensus 243 ~~~~~~~-~~~~~~~~q~~~~~~l~~--~~~~~~~~~~~~~~~~~~~~~l~~~-~~~-~-~~~~g~~i~~~~~~------ 310 (359)
T PRK03158 243 KLNIARP-PFNTTRIAQYAAIAALED--QAFLKECVEKNAEGLEQYYAFCKEY-GLF-Y-YPSQTNFIFVDTGR------ 310 (359)
T ss_pred HHHHhcC-CCCCCHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHHHHHC-CCe-e-CCCcCcEEEEECCC------
Confidence 8876654 357899999999999975 4678888888899999999999888 676 4 56678999998742
Q ss_pred CCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEeeCChhhHHHHHHHHHHH
Q 014936 354 IDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFAVDPYSLEECLDRIKSF 404 (415)
Q Consensus 354 ~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~~~l~~~l~~l~~~ 404 (415)
++.++...++ ++||.+.||..|+.++++||+++ +.++++.++++|+++
T Consensus 311 -~~~~~~~~l~-~~gv~v~~g~~f~~~~~iRi~~~-~~~~~~~l~~al~~~ 358 (359)
T PRK03158 311 -DANELFEALL-KKGYIVRSGAALGFPTGVRITIG-LKEQNDKIIELLKEL 358 (359)
T ss_pred -CHHHHHHHHH-HCCeEEeeCCCCCCCCeEEEecC-CHHHHHHHHHHHHHh
Confidence 4667777775 57999999999987899999997 567778888888764
No 75
>TIGR03801 asp_4_decarbox aspartate 4-decarboxylase. This enzyme, aspartate 4-decarboxylase (EC 4.1.1.12), removes the side-chain carboxylate from L-aspartate, converting it to L-alanine plus carbon dioxide. It is a PLP-dependent enzyme, homologous to aspartate aminotransferase (EC 2.6.1.1).
Probab=100.00 E-value=1.8e-45 Score=349.76 Aligned_cols=386 Identities=18% Similarity=0.306 Sum_probs=282.5
Q ss_pred CccCCcchhhHHHHHHHhhhcccccccC----cceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHH
Q 014936 7 GIDNTGSIITIKGMLSLLMQSVDDEKNE----KKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLT 82 (415)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~l 82 (415)
+.+..|...+|..-+..+....+. ..| +++++++.|.|+ +++++ +++++.+.+.. . .|+++.|..++
T Consensus 63 ~~~g~~~~~g~~~r~~~~~~~~~~-~~g~~~l~~~i~l~~g~p~----~~~~~-~~~~~~~~~~~-~--~Y~~p~g~~~~ 133 (521)
T TIGR03801 63 GLGGMPQKEGIEERFETFLAENKS-QPGAEFLRDIISYVIDQLG----FDPDA-FLYEMCDGIIG-D--NYPVPDRMLPH 133 (521)
T ss_pred CcCCCcCcchHHHHHHHHHHhCCC-CchHHHHHHHHhhcCCCCC----CCCCH-HHHHHHHHhhc-C--CCCCCCCCHHH
Confidence 344455555666665544433310 001 257999999976 55555 44555555432 2 58877888888
Q ss_pred HHHHHH-HHhhhCCCC-CCCC--cEEEeCChHHHHHHHHHH-----hcCCCCEEEEcCCCCcchHHHHHhC--CCeEEEe
Q 014936 83 RRAIAE-YLSRDLPYK-LTPN--DVFVTSGCTQAIDVAMAL-----LSRPGANILLPRPGFPIYELSAAFR--HIEVRHF 151 (415)
Q Consensus 83 r~~ia~-~~~~~~~~~-~~~~--~i~i~~g~~~al~~~~~~-----l~~~gd~vi~~~p~y~~~~~~~~~~--g~~~~~~ 151 (415)
++++++ |+.+.++.. ..++ +|++|+|+++++..++.+ +++|||+|+++.|+|+.|...++.. |.+++.+
T Consensus 134 ~e~iv~~y~~~~~~~~~~~~~~~~V~it~Gat~al~~~~~~l~~~~ll~pGD~Vlv~~P~y~~y~~~~~l~~~g~~vv~i 213 (521)
T TIGR03801 134 SEKIVHQYLIQEMCGNKPPPGEFDLFAVEGGTAAMCYIFDSLKANELLKKGDKIALMTPIFTPYLEIPELPRYDFEVVRI 213 (521)
T ss_pred HHHHHHHHHHhhccCCCCCCCcCeEEEeCCHHHHHHHHHHHHhHhhcCCCCCEEEEeCCCcHHHHHHHHHhcCCcEEEEe
Confidence 888885 666554433 3334 899999999999999887 6899999999999999999987765 6777777
Q ss_pred eccCCCC-----CCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhc--CcEEEEccccCCcccCCCC
Q 014936 152 DLLPDKG-----WEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKL--KTLVIADEVYGHLVFGDKP 224 (415)
Q Consensus 152 ~~~~~~~-----~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~--~~~li~De~~~~~~~~~~~ 224 (415)
+.+++++ |.+|.++++++++++++++++++||||||.+++.+++++|+++|++| +++||+||+|+.+.+.
T Consensus 214 ~~~~~~~~g~~~~~~d~~~l~~~~~~~~kai~l~nP~NPTG~vls~e~l~~I~~ia~~~~~~l~II~DEvY~~f~~~--- 290 (521)
T TIGR03801 214 KADEMTEDGTHTWQYPDKELEKLRDPSIKALFVVNPSNPPSVAMSDESIEKIVDIVANDRPDLMILTDDVYGTFVDD--- 290 (521)
T ss_pred ecccccccccccCCCCHHHHHHhcCCCCcEEEEeCCCCCCCCCCCHHHHHHHHHHHHhcCCCeEEEECCCchhhccc---
Confidence 7654433 88999999999888999999999999999999999999999999986 9999999999987742
Q ss_pred cccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCC------hHHHHHHH-----------------------
Q 014936 225 FVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFR------KPKVVERM----------------------- 275 (415)
Q Consensus 225 ~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~------~~~~~~~~----------------------- 275 (415)
+.++... ..+++|++.||||.|+++|||+||+++++.. +++ .++..+.+
T Consensus 291 ~~sl~~~-~~~~vI~v~SfSK~fg~~G~RlG~i~~~~~~-v~d~li~~lp~~~~~~l~~ry~~~~~~p~~~~fidr~vad 368 (521)
T TIGR03801 291 FRSLFAE-LPYNTIGVYSFSKYFGATGWRLGTIALHKDN-IFDKLIAELPEEKKKELDKRYSSLTTEPRKLKFIDRLVAD 368 (521)
T ss_pred ccchhhh-CCCCEEEEEcchhhccCchhhhhhhhcCchH-HHHHHHHhccHHHHHHHhhhhccccCChhhhhhHHHHHHH
Confidence 2233232 2358999999999999999999999987521 000 00011111
Q ss_pred -Hhh-ccccCCchhHHHH-----HHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCcc
Q 014936 276 -KKY-FDILGDPATFIQA-----AVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLS 348 (415)
Q Consensus 276 -~~~-~~~~~~~~~~~~~-----a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~ 348 (415)
+.. .+++.+.+.+.|. ++.++++ ..+.+.++.++.++++++.+.+.| .+ .+. ...|.+++|+|++++..
T Consensus 369 sr~v~~~~~~g~s~p~Q~q~al~a~~all~-~~~~y~~~~~~~~~~R~~~l~~~L-g~-~~~-~~~~~g~~Y~~~di~~~ 444 (521)
T TIGR03801 369 SRQVALNHTAGLSTPQQVQMALFSLFALMD-KENAYKAETKDICRRREKLLFRGL-GL-PLQ-EDPNDVAYYTLIDLEEW 444 (521)
T ss_pred HHHHHHhccCCCCcHHHHHHHHHHHHHHhc-cchhHHHHHHHHHHHHHHHHHHhc-CC-CCc-CCCCCeEEEEEeehHHH
Confidence 222 2234556666665 3444554 345788999999999999999888 22 222 23688899999998742
Q ss_pred ccC-----------CCCCHHHHHHHHHhhcCeEEEcCCCCCC-CCeEEEEee-CChhhHHHHHHHHHHHHHHHHH
Q 014936 349 LLD-----------DIIDDIDFCFKLAKEESVIILPGTAVGL-KNWLRVTFA-VDPYSLEECLDRIKSFYQRHAK 410 (415)
Q Consensus 349 ~~~-----------~~~~~~~~~~~ll~~~gi~v~~g~~~~~-~~~iRi~~~-~~~~~l~~~l~~l~~~~~~~~~ 410 (415)
... ...++.+++.+|++++||.+.||..|+. .+++|||++ .+++++.++.++|.+++.++..
T Consensus 445 ~~~~~~~~f~~~l~~~~~~~~~~~~L~~e~gV~v~PG~~Fg~~~~~vRisla~l~~~~~~~~~~rl~~~~~~~~~ 519 (521)
T TIGR03801 445 AEKNYGEEFSSYLKKNYSPVDVLFRLAEETGIVLLPGGGFGGPEWSVRVSLANLNEYDYAEIGRAIRKILDEYYE 519 (521)
T ss_pred HHHhcchHHHHHHhccCCHHHHHHHHHHhCCEEEeCchhcCCCCCeEEEEecCCCHHHHHHHHHHHHHHHHHHHH
Confidence 100 0125789999999999999999999986 467999997 6899999999999999977654
No 76
>KOG0256 consensus 1-aminocyclopropane-1-carboxylate synthase, and related proteins [Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-45 Score=322.04 Aligned_cols=373 Identities=24% Similarity=0.398 Sum_probs=301.5
Q ss_pred ccccccCcceeEecccCCCCCCCCCCcHHHHHHHHHHHh---c-----CCCCCCCCCCCcHHHHHHHHHHHhhhCCCC--
Q 014936 28 VDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALL---S-----EKFNGYAPTAGLPLTRRAIAEYLSRDLPYK-- 97 (415)
Q Consensus 28 ~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~---~-----~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~-- 97 (415)
++++.|+.++|+++...+.. ++.....+.+.-.++.. . ..+..|.+..|.+++|+++|+|+.+.+|-.
T Consensus 66 y~~~~Np~GiIQmGlaENql--c~DL~~~wl~k~~~~~~~~~eg~~~f~~la~fqdy~Gl~~frqa~A~Fm~~~r~~~v~ 143 (471)
T KOG0256|consen 66 YDPIKNPLGIIQMGLAENQL--CFDLIESWLSKNPEASNCTREGQSSFDELAMFQDYHGLPSFRQAVAEFMERARGNRVK 143 (471)
T ss_pred CCCCCCchHHHHhhhhhhHH--HHHHHHHHHHhChhhhhcccccccchhhHhhcccccCchHHHHHHHHHHHHHhCCCCc
Confidence 36667788899998887542 11111111111111111 1 134678899999999999999999877644
Q ss_pred CCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHH-hCCCeEEEeeccCCCCCCCChhHHHhhcCC----
Q 014936 98 LTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAA-FRHIEVRHFDLLPDKGWEVDLDDIESLADQ---- 172 (415)
Q Consensus 98 ~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~---- 172 (415)
.+|+++++++|+|.+++++..+|.+|||.-+++.|.|+++..-++ ..|++++++.....+++.++++++|.++.+
T Consensus 144 fdP~~~Vv~~G~T~ane~l~fcLadpgdafLvPtPyY~gfdrdl~~rTgveivpv~c~Ss~~f~itv~alE~A~~~A~~~ 223 (471)
T KOG0256|consen 144 FDPERVVVTNGATSANETLMFCLADPGDAFLVPTPYYPGFDRDLRWRTGVEIVPVHCSSSNGFQITVEALEAALNQARKL 223 (471)
T ss_pred cCccceEEecccchhhHHHHHHhcCCCceeeecCCCCCcccccceeccCceEEEEEeecCCCccccHHHHHHHHHHHHHh
Confidence 578999999999999999999999999999999999999876554 568999999988888999999999987753
Q ss_pred --CceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccC-----CCCCeEEEccCcc
Q 014936 173 --NTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFG-----STVPILTLGSLSK 245 (415)
Q Consensus 173 --~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~-----~~~~~i~~~s~sK 245 (415)
+.+.++++||+||.|.+++.+++..+++++.++|+++|+||+|+..+|+...+.++.++. ..+++.+++|+||
T Consensus 224 ~~kVkGvlitNPsNPLG~~~~~e~L~~ll~Fa~~kniHvI~DEIya~sVF~~~~F~Sv~ev~~~~~~~~~rvHivyslSK 303 (471)
T KOG0256|consen 224 GLKVKGVLITNPSNPLGTTLSPEELISLLNFASRKNIHVISDEIYAGSVFDKSEFRSVLEVRKDPHLDPDRVHIVYSLSK 303 (471)
T ss_pred CCceeEEEEeCCCCCCCCccCHHHHHHHHHHHhhcceEEEeehhhcccccCccCceEHHHHhhccccCCCcEEEEEEecc
Confidence 568899999999999999999999999999999999999999999999988877765542 3457899999999
Q ss_pred ccCCCCceEEEEEeeCCCCCCChHHHHHHHHhhccccCCchhHHHHHHHHhhCCCc--HHHHHHHHHHHHHHHHHHHHHh
Q 014936 246 RWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQAAVPSILQQPD--EVFFKKTLNLLKQSVDICYNKI 323 (415)
Q Consensus 246 ~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~--~~~~~~~~~~~~~~~~~l~~~l 323 (415)
-||+||+|+|.+...++ ++.....+... .+..++..|..++.+|.+.. ++++++..++++.+.+++.+.|
T Consensus 304 D~GlpGfRvGviYS~ne-------~VvsaA~kmss-f~~vSs~tQ~~la~LLSD~~f~~~yl~en~~Rl~~rh~~~~~gL 375 (471)
T KOG0256|consen 304 DFGLPGFRVGVIYSNNE-------DVVSAATKMSS-FGLVSSQTQYLLASLLSDEEFTREYLRENNKRLRIRHRYIVEGL 375 (471)
T ss_pred ccCCCceEEEEEEecCh-------HHHHHHHHHhh-ccCCcHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHhhH
Confidence 99999999999999773 36666666544 46789999999999998743 5888999999999999999999
Q ss_pred hcCCCCcCCCCCCCceEEEEecCccccC-CCCCHHHHHHHHHhhcCeEEEcCCCCCC--CCeEEEEeeCC-hhhHHHHHH
Q 014936 324 KEIPCISCPHKPEGSMAVMLKLNLSLLD-DIIDDIDFCFKLAKEESVIILPGTAVGL--KNWLRVTFAVD-PYSLEECLD 399 (415)
Q Consensus 324 ~~~~~~~~~~~p~~g~~~~~~l~~~~~~-~~~~~~~~~~~ll~~~gi~v~~g~~~~~--~~~iRi~~~~~-~~~l~~~l~ 399 (415)
+++ |+.+. ..++|+|+|+++..--.+ ......++++.++.+-++-++||+.|.. +||+|++|+.. ++.++-+++
T Consensus 376 k~l-gI~cl-~s~AGlF~wvDlr~lL~s~tfe~El~Lw~~i~~~vklnlSpG~s~~C~EpGWFRvcFAn~~~~t~~~am~ 453 (471)
T KOG0256|consen 376 KAL-GIPCL-KSNAGLFCWVDLRKLLTSLTFEGELELWERILDNVKLNLSPGSSCHCHEPGWFRVCFANMSEETLEVAMR 453 (471)
T ss_pred Hhc-CCcee-ecCCeeEEEEEhHHhcCcCChHHHHHHHHHHHHhhccccCCCCcceecCCCeEEEEeccCCHHHHHHHHH
Confidence 999 88854 889999999998542221 2234568888888888999999999765 89999999764 555555999
Q ss_pred HHHHHHHHHHHHh
Q 014936 400 RIKSFYQRHAKQL 412 (415)
Q Consensus 400 ~l~~~~~~~~~~~ 412 (415)
||+.++.++...+
T Consensus 454 Ri~~~~~~~~~~l 466 (471)
T KOG0256|consen 454 RLKQFLDSQVQPL 466 (471)
T ss_pred HHHHHHHhhhccc
Confidence 9999998765544
No 77
>PRK05166 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=1.3e-44 Score=339.69 Aligned_cols=331 Identities=20% Similarity=0.313 Sum_probs=269.5
Q ss_pred CcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHH
Q 014936 34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAI 113 (415)
Q Consensus 34 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al 113 (415)
+..+++|+.|.|. +.+++.+.+++.+... ....|+++.| .+||+++|+++ ++++++|++|+|+++++
T Consensus 35 ~~~~i~l~~~~~~----~~~~~~~~~al~~~~~--~~~~Y~~~~g-~~lr~~ia~~~------~~~~~~i~~t~G~~~~l 101 (371)
T PRK05166 35 VPRIAKLGSNENP----LGPSPAVRRAFADIAE--LLRLYPDPQG-RALREAIAART------GVPADRIILGNGSEDLI 101 (371)
T ss_pred CcceEEcCCCCCC----CCCCHHHHHHHHHHHH--HhhcCCCCcH-HHHHHHHHHHh------CcCHHHEEEcCCHHHHH
Confidence 5578999999864 5667889999887543 3457998888 59999999998 56889999999999999
Q ss_pred HHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHH
Q 014936 114 DVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQ 193 (415)
Q Consensus 114 ~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~ 193 (415)
..++.+++++||.|+++.|+|+.+...++..|+++..++.++ ++++|++++++.++++++++++++||||||.+++.+
T Consensus 102 ~~~~~~~~~~gd~vli~~P~y~~~~~~~~~~g~~~~~v~~~~--~~~~~~~~l~~~~~~~~~~v~l~~p~NPtG~~~~~~ 179 (371)
T PRK05166 102 AVICRAVLRPGDRVVTLYPSFPLHEDYPTMMGARVERVTVTP--DLGFDLDALCAAVARAPRMLMFSNPSNPVGSWLTAD 179 (371)
T ss_pred HHHHHHhcCCCCEEEEcCCChHHHHHHHHHcCCeEEEeecCC--CCCCCHHHHHHhhhcCCCEEEEeCCCCCCCCCCCHH
Confidence 999999999999999999999999999999999999998753 357899999999988889999999999999999999
Q ss_pred HHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccC-CCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHH
Q 014936 194 HLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFG-STVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVV 272 (415)
Q Consensus 194 ~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~-~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~ 272 (415)
++++|+++|++ ++++|+||+|.++.+++.....+..+. ..+++|+++||||.|+++|+|+||+++++ +++.
T Consensus 180 ~~~~l~~~~~~-~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~l~GlRiG~~i~~~-------~~l~ 251 (371)
T PRK05166 180 QLARVLDATPP-ETLIVVDEAYAEYAAGDDYPSALTLLKARGLPWIVLRTFSKAYGLAGLRVGYGLVSD-------PELV 251 (371)
T ss_pred HHHHHHHhCCC-CcEEEEECcHHHhcCCcCcccHHHHHhhcCCCEEEEeechHhhhcchhheeeeecCC-------HHHH
Confidence 99999999975 889999999999885433222222222 23579999999999999999999988744 2577
Q ss_pred HHHHhhccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCccccCC
Q 014936 273 ERMKKYFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLDD 352 (415)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~~~ 352 (415)
+.+..... ....+.++|.++..++.+ ..++++.++.++++++.+.+.|++. ++. + .|.+|+|+|++++.
T Consensus 252 ~~~~~~~~-~~~~~~~~q~~~~~~l~~--~~~~~~~~~~~~~~r~~l~~~L~~~-g~~-~-~p~~g~fl~~~~~~----- 320 (371)
T PRK05166 252 GLLDRVRT-PFNVNGAAQAAALAALDD--EEHLAKGVALALAERERLKKELAEM-GYR-I-APSRANFLFFDARR----- 320 (371)
T ss_pred HHHHHhcc-CCCCCHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHHHHHC-cCe-e-CCCcCCEEEEeCCC-----
Confidence 77765543 356788889888888864 4788888899999999999999988 676 4 57778999998753
Q ss_pred CCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEeeCCh--hhHHHHHHHH
Q 014936 353 IIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFAVDP--YSLEECLDRI 401 (415)
Q Consensus 353 ~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~--~~l~~~l~~l 401 (415)
++.++...++ ++||.+.||..++.++++||+++.++ +.+.++++.+
T Consensus 321 --~~~~l~~~l~-~~gi~v~p~~~~~~~~~iRi~~~~~~~~~~l~~~l~~i 368 (371)
T PRK05166 321 --PASAVAEALL-RQGVIVKPWKQPGFETFIRVSIGSPEENDHFVAALDKV 368 (371)
T ss_pred --CHHHHHHHHH-HCCeEEecCCCCCCCCeEEEEcCCHHHHHHHHHHHHHH
Confidence 4667777775 46999999987777899999998532 4444444443
No 78
>PRK08056 threonine-phosphate decarboxylase; Provisional
Probab=100.00 E-value=2.3e-44 Score=336.18 Aligned_cols=333 Identities=21% Similarity=0.328 Sum_probs=268.2
Q ss_pred CcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHH
Q 014936 34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAI 113 (415)
Q Consensus 34 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al 113 (415)
+.++++|+.|.+. +++++.+++++.+.+.. ...|++. +..++|+++|+++ ++++++|++|+|+++++
T Consensus 19 ~~~~i~l~~~~~~----~~~p~~~~~a~~~~~~~--~~~y~~~-~~~~lr~~ia~~~------~~~~~~i~it~Ga~~~l 85 (356)
T PRK08056 19 PDQLLDFSANINP----LGMPVSLKRAIIDNLDC--AERYPDV-EYRHLHQALARHH------QVPASWILAGNGETESI 85 (356)
T ss_pred hhhEEEeccccCC----CCCCHHHHHHHHHHHHh--cccCcCc-cHHHHHHHHHHHh------CcChhhEEECCCHHHHH
Confidence 5678999999854 77889999999887763 3478764 6899999999998 57899999999999999
Q ss_pred HHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHH
Q 014936 114 DVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQ 193 (415)
Q Consensus 114 ~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~ 193 (415)
..++.++ .+|+ +++..|+|..+...++..|+++..++.++++++.+| +++++.+.++++++++++||||||.+++.+
T Consensus 86 ~~~~~~l-~~g~-viv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~-~~~~~~~~~~~k~v~l~~p~NPTG~~~~~~ 162 (356)
T PRK08056 86 FAVVSGL-KPRR-AMIVTPGFAEYRRALQQVGCEIRRYSLREADGWQLT-DAILEALTPDLDCLFLCTPNNPTGLLPERQ 162 (356)
T ss_pred HHHHHHh-CCCC-EEEeCCCcHHHHHHHHHcCCeEEEEecccccCCCcc-HHHHHhccCCCCEEEEeCCcCCCCCCCCHH
Confidence 9999887 5775 777899999999999999999999998766666666 455556667889999999999999999999
Q ss_pred HHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHH
Q 014936 194 HLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVE 273 (415)
Q Consensus 194 ~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~ 273 (415)
++++|+++|+++++++|+||+|.++.+.+....+. +...+++++++||||.|+++|+|+||+++++ +++++
T Consensus 163 ~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~--~~~~~~~i~~~S~SK~~~~~G~RiG~~v~~~-------~~~~~ 233 (356)
T PRK08056 163 LLQAIAERCKSLNIALILDEAFIDFIPDETGFIPQ--LADNPHLWVLRSLTKFYAIPGLRLGYLVNSD-------DAAVA 233 (356)
T ss_pred HHHHHHHHHHhcCCEEEEecchhccCCcchHHHHH--hccCCCEEEEEechhhccCcchhheeeecCC-------HHHHH
Confidence 99999999999999999999999987654322222 2234578999999999999999999999853 24666
Q ss_pred HHHhhccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCccccCCC
Q 014936 274 RMKKYFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLDDI 353 (415)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~~~~ 353 (415)
.+..... .++.+.++|.++..+++. ..+.++.++.++++++.+.+.|++++++. + .|.+|+|+|++++.
T Consensus 234 ~l~~~~~-~~~~~~~~~~~a~~~l~~--~~~~~~~~~~~~~~r~~l~~~L~~~~~~~-~-~~~~~~~~~~~~~~------ 302 (356)
T PRK08056 234 RMRRQQM-PWSINAFAALAGEVILQD--RAYQQATWQWLAEEGARFYQALCALPLLT-V-WPGRANYLFLRCER------ 302 (356)
T ss_pred HHHHhCC-CCchhHHHHHHHHHHhCC--HHHHHHHHHHHHHHHHHHHHHHhcCCCcE-E-cCCCCcEEEEEcCC------
Confidence 6665433 456777888888888864 46777888999999999999999887776 4 45678999998863
Q ss_pred CCHHHHHHHHHhhcCeEEEcCCCCCC--CCeEEEEeeCChhhHHHHHHHHHHHH
Q 014936 354 IDDIDFCFKLAKEESVIILPGTAVGL--KNWLRVTFAVDPYSLEECLDRIKSFY 405 (415)
Q Consensus 354 ~~~~~~~~~ll~~~gi~v~~g~~~~~--~~~iRi~~~~~~~~l~~~l~~l~~~~ 405 (415)
++.++...++ ++||.+.+|..|.. .++|||+++. .++.+.+++.|++++
T Consensus 303 -~~~~~~~~l~-~~gI~v~~~~~f~~~~~~~iRis~~~-~~~~~~l~~~l~~~~ 353 (356)
T PRK08056 303 -PDIDLQRALL-TQRILIRSCANYPGLDSRYYRVAIRS-AAENERLLAALRNVL 353 (356)
T ss_pred -ChHHHHHHHH-HCCeEEEECCCCCCCCCCEEEEEEcC-HHHHHHHHHHHHHHH
Confidence 3556777765 57999999998843 4699999974 455566666666554
No 79
>PRK07392 threonine-phosphate decarboxylase; Validated
Probab=100.00 E-value=2.8e-44 Score=336.36 Aligned_cols=329 Identities=19% Similarity=0.274 Sum_probs=263.9
Q ss_pred CcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHH
Q 014936 34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAI 113 (415)
Q Consensus 34 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al 113 (415)
..++++|+.|.+. +++++.+.+++.+.+.. ...|+++ +..+||++||+|+ ++++++|++|+|+++++
T Consensus 21 ~~~~i~l~~~~n~----~~~~~~~~~a~~~~~~~--~~~Y~~~-~~~~Lr~aia~~~------~v~~~~I~it~G~~~~i 87 (360)
T PRK07392 21 PDAILDFSASINP----LGPPESVIAAIQSALSA--LRHYPDP-DYRELRLALAQHH------QLPPEWILPGNGAAELL 87 (360)
T ss_pred cccEEEeCCcCCC----CCCCHHHHHHHHHHHHH--hhcCCCc-CHHHHHHHHHHHh------CcChhhEEECCCHHHHH
Confidence 4468999999754 67789999999887763 5579875 4689999999998 57899999999999999
Q ss_pred HHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCC---CCChhHHHhhcCCCceEEEecCCCCccccCC
Q 014936 114 DVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGW---EVDLDDIESLADQNTVALVIINPGNPCGNVY 190 (415)
Q Consensus 114 ~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~---~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~ 190 (415)
..++.++. +||.|++++|+|..+...++..|++++.++.++++++ ..+++.+++.. .+++++++++||||||.++
T Consensus 88 ~~~~~~l~-~g~~vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~nP~NPTG~~~ 165 (360)
T PRK07392 88 TWAGRELA-QLRAVYLITPAFGDYRRALRAFGATVKELPLPLDQPSPGLTLRLQTLPPQL-TPNDGLLLNNPHNPTGKLW 165 (360)
T ss_pred HHHHHHhC-CCCeEEEECCCcHHHHHHHHHcCCeEEEEecccccCCcccccCHHHHHHhc-cCCCEEEEeCCCCCCCCCc
Confidence 99999875 6899999999999999999999999999998655443 34677776554 3678899999999999999
Q ss_pred CHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHH
Q 014936 191 SYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPK 270 (415)
Q Consensus 191 ~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~ 270 (415)
+.+++.+++ +++++ +|+||+|.++.+++.....+..++..+++|+++||||.|+++|+|+||+++++ +
T Consensus 166 ~~~~l~~l~---~~~~~-~IiDE~y~~~~~~~~~~s~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~~v~~~--------~ 233 (360)
T PRK07392 166 SREAILPLL---EQFAL-VVVDEAFMDFLPPDAEQSLIPCLAEYPNLIILRSLTKFYSLPGLRLGYAIAHP--------D 233 (360)
T ss_pred CHHHHHHHH---HHCCE-EEEECchhhhccCccccchHHHhhcCCCEEEEEechhhhcCCchheeeeeCCH--------H
Confidence 977666554 56775 66799999988765322223334455689999999999999999999999865 5
Q ss_pred HHHHHHhhccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCcccc
Q 014936 271 VVERMKKYFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLL 350 (415)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~ 350 (415)
+++.+..... .++++.++|.++..+|++ ..+.++.++.++++++.+.+.|++++++. + .|.+++|+|++++.
T Consensus 234 ~~~~~~~~~~-~~~~s~~~q~~~~~~l~~--~~~~~~~~~~~~~~r~~l~~~L~~~~~~~-~-~~~~~~fl~~~~~~--- 305 (360)
T PRK07392 234 RLQRWQQWRD-PWPVNGLAAAAAIAALAD--RDFQQQTWAWLPPAREALFQGLASLPGLT-P-LPSAANFLLVQSQG--- 305 (360)
T ss_pred HHHHHHhhCC-CCCCCHHHHHHHHHHhcc--HHHHHHHHHHHHHHHHHHHHHHHhCCCcE-E-CCCCCCEEEEEcCC---
Confidence 7777765543 467889999999999975 36677777889999999999999888877 4 56889999988753
Q ss_pred CCCCCHHHHHHHHHhhcCeEEEcCCCCCC--CCeEEEEeeCCh--hhHHHHHHHH
Q 014936 351 DDIIDDIDFCFKLAKEESVIILPGTAVGL--KNWLRVTFAVDP--YSLEECLDRI 401 (415)
Q Consensus 351 ~~~~~~~~~~~~ll~~~gi~v~~g~~~~~--~~~iRi~~~~~~--~~l~~~l~~l 401 (415)
++.++...+++++||.+.||..|+. ++++||+++.++ +++.++++++
T Consensus 306 ----~~~~l~~~ll~~~gv~v~pg~~f~~~~~~~iRi~~~~~~~~~~l~~al~~~ 356 (360)
T PRK07392 306 ----SALQLQEKLLQQHRILIRDCLSFPELGDRYFRVAVRTEAENQRLLEALAAI 356 (360)
T ss_pred ----CHHHHHHHHHhhCCEEEEeCCCCCCCCCCEEEEEeCCHHHHHHHHHHHHHH
Confidence 4677888877888999999999864 579999997643 5666666654
No 80
>PLN03026 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=3.5e-44 Score=337.02 Aligned_cols=327 Identities=21% Similarity=0.292 Sum_probs=267.3
Q ss_pred CcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHH
Q 014936 34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAI 113 (415)
Q Consensus 34 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al 113 (415)
+.++++|+.|.+. +++++.+++++.+.. ....|+++ +..+||++|++++ ++++++|++|+|+++++
T Consensus 51 ~~~~i~l~~n~~p----~~~~~~v~~a~~~~~---~~~~Yp~~-~~~~lr~~ia~~~------~~~~~~I~~t~Ga~~~i 116 (380)
T PLN03026 51 PEDIVKLDANENP----YGPPPEVLEALGNMK---FPYVYPDP-ESRRLRAALAEDS------GLESENILVGCGADELI 116 (380)
T ss_pred ccceEEccCCCCC----CCCCHHHHHHHHhhH---hhccCCCC-CHHHHHHHHHHHh------CcChhhEEEcCCHHHHH
Confidence 4688999999854 667788888886531 23468764 6899999999998 57889999999999999
Q ss_pred HHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhc-CCCceEEEecCCCCccccCCCH
Q 014936 114 DVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLA-DQNTVALVIINPGNPCGNVYSY 192 (415)
Q Consensus 114 ~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~v~i~~p~nptG~~~~~ 192 (415)
..++.+++++||+|++++|+|+.|...++..|+++..++.+ .++.+|++++++.+ .++++++++++||||||.+++.
T Consensus 117 ~~~~~~~~~~gd~Vlv~~P~y~~y~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~~~~~~~~~v~l~~P~NPTG~~~~~ 194 (380)
T PLN03026 117 DLLMRCVLDPGDKIIDCPPTFGMYVFDAAVNGAEVIKVPRT--PDFSLDVPRIVEAVETHKPKLLFLTSPNNPDGSIISD 194 (380)
T ss_pred HHHHHHhcCCCCEEEEcCCChHHHHHHHHHcCCEEEEeecC--CCCCcCHHHHHHHHhccCCcEEEEeCCCCCCCCCCCH
Confidence 99999999999999999999999998899999999999874 35779999999988 6789999999999999999999
Q ss_pred HHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHH
Q 014936 193 QHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVV 272 (415)
Q Consensus 193 ~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~ 272 (415)
+++++|++.+ +++|+||+|.++.+.+. ....+...+++++++||||.|+++|+|+||+++++ +++
T Consensus 195 ~~l~~l~~~~----~~vi~DeaY~~~~~~~~---~~~~~~~~~~viv~~SfSK~~glaGlRiGy~~~~~--------~~i 259 (380)
T PLN03026 195 DDLLKILELP----ILVVLDEAYIEFSTQES---RMKWVKKYDNLIVLRTFSKRAGLAGLRVGYGAFPL--------SII 259 (380)
T ss_pred HHHHHHHhcC----CEEEEECcchhhcCCcc---hHHHHHhCCCEEEEecchHhhcCccccceeeecCH--------HHH
Confidence 9999998753 89999999998875432 12223345689999999999999999999999864 678
Q ss_pred HHHHhhccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCccccCC
Q 014936 273 ERMKKYFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLDD 352 (415)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~~~ 352 (415)
+.+..... .+..+.++|.++.++|++ .+++++.++.++++++.+.+.|++++++. + .|.+++|+|++++..
T Consensus 260 ~~l~~~~~-~~~~~~~~q~aa~~aL~~--~~~~~~~~~~~~~~r~~l~~~L~~~~~~~-~-~p~~~~f~~~~~~~~---- 330 (380)
T PLN03026 260 EYLWRAKQ-PYNVSVAAEVAACAALSN--PKYLEDVKNALVEERERLFGLLKEVPFLE-P-YPSDANFILCRVTSG---- 330 (380)
T ss_pred HHHHHhcC-CCCCCHHHHHHHHHHhhC--HHHHHHHHHHHHHHHHHHHHHHHHCCCCe-E-CCCCCeEEEEECCCC----
Confidence 88776654 356788899999999975 47788899999999999999999885554 4 688899999988631
Q ss_pred CCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEeeCChhhHHHHHHHHHH
Q 014936 353 IIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFAVDPYSLEECLDRIKS 403 (415)
Q Consensus 353 ~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~~~l~~~l~~l~~ 403 (415)
.+..++...++ ++||.+.++..++.++++||+++. .++.+.+++.|++
T Consensus 331 -~~~~~~~~~l~-~~gI~v~~~~~~~~~~~lRis~~~-~~~~~~l~~al~~ 378 (380)
T PLN03026 331 -RDAKKLKEDLA-KMGVMVRHYNSKELKGYIRVSVGK-PEHTDALMEALKQ 378 (380)
T ss_pred -CCHHHHHHHHH-HCCeEEEECCCCCCCCEEEEecCC-HHHHHHHHHHHHH
Confidence 24667777765 679999998766667899999984 4455666666543
No 81
>PLN02397 aspartate transaminase
Probab=100.00 E-value=6.9e-44 Score=338.88 Aligned_cols=345 Identities=17% Similarity=0.193 Sum_probs=258.4
Q ss_pred CcceeEecccC-CCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcE-----EEeC
Q 014936 34 EKKVISLAMGD-PTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDV-----FVTS 107 (415)
Q Consensus 34 ~~~~i~l~~g~-~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i-----~i~~ 107 (415)
+...++++.|. |+........+.+.++....+..+....|+++.|.++||+++++|+.+..+...++++| +.++
T Consensus 47 ~~~~l~l~~g~~p~~~~~p~~~~~~~~a~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~~~~~~~~~i~~~~i~~g~ 126 (423)
T PLN02397 47 SPVKLNLGVGAYRTEEGKPVVLNVVRKAEQRLLAGSRNKEYLPIEGLAEFNKLSAKLAYGADSPAIKENRVATVQCLSGT 126 (423)
T ss_pred CcceEecccceeeCCCCCcccchHHHHHHHHhhccCCCCCCCCcCCCHHHHHHHHHHHcCCCCchhhcCeeEeeecccch
Confidence 45678999996 55332112245666766555444444579999999999999999996533322233343 2333
Q ss_pred ChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcC---CCceEEEecCCCC
Q 014936 108 GCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLAD---QNTVALVIINPGN 184 (415)
Q Consensus 108 g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~---~~~~~v~i~~p~n 184 (415)
|+. ++...+..++.|||+|++++|+|+.|...++..|++++.++..+++++++|++.+++.+. ++++++++++|||
T Consensus 127 Ga~-~l~~~~~~~~~pGd~Vlv~~P~y~~y~~~~~~~g~~~~~v~l~~~~~~~~d~~~l~~~l~~~~~~~~~i~~~~P~N 205 (423)
T PLN02397 127 GSL-RLGAEFLARFYPGSTIYIPNPTWGNHHNIFRDAGVPVRTYRYYDPKTRGLDFDGLLEDLKAAPDGSFVLLHACAHN 205 (423)
T ss_pred HHH-HHHHHHHHHhCCCCEEEEeCCCchhHHHHHHHcCCeEEEeecccCcCCccCHHHHHHHHHhCCCCCEEEEeCCCCC
Confidence 333 344444455579999999999999999999999999999987444457899998877664 4578888899999
Q ss_pred ccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCC--CcccccccC-CCCCeEEEccCccccCCCCceEEEEE--e
Q 014936 185 PCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDK--PFVPMGVFG-STVPILTLGSLSKRWIVPGWRLGWFV--T 259 (415)
Q Consensus 185 ptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~--~~~~~~~~~-~~~~~i~~~s~sK~~~~~G~r~G~~~--~ 259 (415)
|||.+++.+++++|+++|++||+++|+||+|.++.+++. ...++..+. ..+++|+++||||.|+++|+|+||++ +
T Consensus 206 PTG~v~s~e~l~~i~~~a~~~~~~vI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vI~~~SfSK~~~~~G~RvG~~v~~~ 285 (423)
T PLN02397 206 PTGVDPTPEQWEQISDLIKSKNHLPFFDSAYQGFASGDLDADAQSVRMFVEDGHEILVAQSYAKNMGLYGERVGALSVVC 285 (423)
T ss_pred CCCCCCCHHHHHHHHHHHHhCCcEEEEecccCCccCCchhhhhHHHHHHHhcCCcEEEEEECcccCCCccccceEEEEEe
Confidence 999999999999999999999999999999999998641 223333332 22469999999999999999999986 3
Q ss_pred eCCCCCCChHHHHH----HHHhhc-cccCCchhHHHHHHHHhhCCCc--HH---HHHHHHHHHHHHHHHHHHHhhcCCC-
Q 014936 260 TDPCGMFRKPKVVE----RMKKYF-DILGDPATFIQAAVPSILQQPD--EV---FFKKTLNLLKQSVDICYNKIKEIPC- 328 (415)
Q Consensus 260 ~~~~~~~~~~~~~~----~~~~~~-~~~~~~~~~~~~a~~~~l~~~~--~~---~~~~~~~~~~~~~~~l~~~l~~~~~- 328 (415)
++ +++++ .+.... ....+++.+.|.++..+|+... +. ++++.++.++++++.+.+.|+++ +
T Consensus 286 ~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~L~~~~~~~~~~~~~~~~~~~~~~rr~~l~~~L~~~-~~ 357 (423)
T PLN02397 286 KS-------ADVAVRVKSQLKLIARPMYSNPPIHGASIVATILGDPELFSEWTKELKGMADRIISMRQKLYDALEAR-GS 357 (423)
T ss_pred CC-------HHHHHHHHHHHHHHHhcccCCCcHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CC
Confidence 22 13333 333332 2234567789999998887631 12 36778889999999999999988 4
Q ss_pred ---CcCCCCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEee-CChhhHHHHHHHHHHH
Q 014936 329 ---ISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFA-VDPYSLEECLDRIKSF 404 (415)
Q Consensus 329 ---~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~-~~~~~l~~~l~~l~~~ 404 (415)
+. +..|++|+|+|++++ .+++..|++++||.+.++ + |++++ .+++++++++++|+++
T Consensus 358 ~~~~~-~~~p~gg~fl~~~l~----------~~~~~~Ll~~~~V~v~~~------~--Ri~~~~~~~~~i~~~~~~i~~~ 418 (423)
T PLN02397 358 PGDWS-HITKQIGMFSFTGLN----------KEQVDRMTKEYHIYMTRD------G--RISMAGLSSKNVPYLADAIHAV 418 (423)
T ss_pred CCCCC-cccCCceEEEecCCC----------HHHHHHHHHhCCEEECCC------C--eEEEeeCCHHHHHHHHHHHHHH
Confidence 66 447999999998773 348899999999999742 2 99995 8999999999999998
Q ss_pred HH
Q 014936 405 YQ 406 (415)
Q Consensus 405 ~~ 406 (415)
+.
T Consensus 419 ~~ 420 (423)
T PLN02397 419 VT 420 (423)
T ss_pred Hh
Confidence 74
No 82
>COG0079 HisC Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase [Amino acid transport and metabolism]
Probab=100.00 E-value=1.1e-43 Score=325.09 Aligned_cols=333 Identities=21% Similarity=0.355 Sum_probs=282.2
Q ss_pred CcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHH
Q 014936 34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAI 113 (415)
Q Consensus 34 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al 113 (415)
.+++++|+++.+. +++++.+++++.+.+. .+..||++ ...+++++++++++ .+++++|++++|+++.+
T Consensus 21 ~~~~i~LssNenP----~gp~~~~~~~~~~~~~--~~~rYPd~-~~~~l~~a~a~~~~-----~~~~~~V~~gnGsde~i 88 (356)
T COG0079 21 LPGIIKLSSNENP----YGPPPKVIEAIRAALD--KLNRYPDP-DYRELRAALAEYYG-----VVDPENVLVGNGSDELI 88 (356)
T ss_pred CccceeecCCCCC----CCCCHHHHHHHHHHHH--hhccCCCC-cHHHHHHHHHHHhC-----CCCcceEEEcCChHHHH
Confidence 3368999999853 7778999999988876 56799997 67999999999993 16889999999999999
Q ss_pred HHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHH
Q 014936 114 DVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQ 193 (415)
Q Consensus 114 ~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~ 193 (415)
..++++++.+||+|++..|+|..|...++..|++++.++..+ |..|++.+...++++++++++||||||||..++.+
T Consensus 89 ~~l~~~~~~~gd~vl~~~Ptf~~Y~~~a~~~g~~~~~v~~~~---~~~d~~~~~~~~~~~~~lv~i~nPNNPTG~~~~~~ 165 (356)
T COG0079 89 ELLVRAFVEPGDTVLIPEPTFSMYEIAAQLAGAEVVKVPLKE---FRLDLDAILAAIRDKTKLVFLCNPNNPTGTLLPRE 165 (356)
T ss_pred HHHHHHhhcCCCEEEEcCCChHHHHHHHHhcCCeEEEecccc---cccCHHHHHHhhhcCCCEEEEeCCCCCCCCCCCHH
Confidence 999999999999999999999999999999999999998754 77999999999988899999999999999999999
Q ss_pred HHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHH
Q 014936 194 HLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVE 273 (415)
Q Consensus 194 ~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~ 273 (415)
+++++++.+.+ +.++|+||+|.+|.- ...........+++++.||||+|+++|+|+||++++. ++++
T Consensus 166 ~l~~l~~~~~~-~~~vVvDEAY~eF~~----~~~~~l~~~~~nlivlRTfSKa~gLAGlRlGy~ia~~--------~~i~ 232 (356)
T COG0079 166 ELRALLEALPE-GGLVVIDEAYIEFSP----ESSLELLKYPPNLIVLRTFSKAFGLAGLRVGYAIANP--------ELIA 232 (356)
T ss_pred HHHHHHHhCCC-CcEEEEeCchhhcCC----chhhhhccCCCCEEEEEecHHhhhcchhceeeccCCH--------HHHH
Confidence 99999999988 999999999999773 2222222345579999999999999999999988754 7999
Q ss_pred HHHhhccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCccccCCC
Q 014936 274 RMKKYFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLDDI 353 (415)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~~~~ 353 (415)
.++.... .+..+.+++.++.++|++. +++++..+.+++.++++.+.|+.++ +..+ .|..++|++++++. .
T Consensus 233 ~l~~vr~-p~~v~~~a~~aa~aal~~~--~~~~~~~~~~~~~r~rl~~~l~~~~-~~~v-~pS~aNFvlv~~~~-----~ 302 (356)
T COG0079 233 ALNKVRP-PFNVSSPALAAAIAALRDA--DYLEESVERIREERERLYAALKALG-LFGV-FPSQANFVLVRVPD-----A 302 (356)
T ss_pred HHHHhcC-CCCCCHHHHHHHHHHcccH--HHHHHHHHHHHHHHHHHHHHHHhCC-CCee-cCCCCcEEEEECCC-----c
Confidence 9988876 4778899999999999873 8899999999999999999999995 4423 78889999999863 1
Q ss_pred CCHHHHHHHHHhhcCeEEEcCCC-CCCCCeEEEEeeCChhhHHHHHHHHHHHHHH
Q 014936 354 IDDIDFCFKLAKEESVIILPGTA-VGLKNWLRVTFAVDPYSLEECLDRIKSFYQR 407 (415)
Q Consensus 354 ~~~~~~~~~ll~~~gi~v~~g~~-~~~~~~iRi~~~~~~~~l~~~l~~l~~~~~~ 407 (415)
....+.+.| .++||.++.... ...++|+||++++.+|. +.+++.|+++++.
T Consensus 303 -~~~~l~~~L-~~~giivR~~~~~~~~~~~lRitvgt~een-~~ll~AL~~~~~~ 354 (356)
T COG0079 303 -EAAALAEAL-LKKGILVRDCSSVGLLPGYLRITVGTPEEN-DRLLAALREVLKG 354 (356)
T ss_pred -cHHHHHHHH-HHCCEEEEeCCCCCCCCCeEEEEeCCHHHH-HHHHHHHHHHHhc
Confidence 233455555 566999998765 23467999999887776 8888888887653
No 83
>PRK02731 histidinol-phosphate aminotransferase; Validated
Probab=100.00 E-value=9.8e-44 Score=334.23 Aligned_cols=335 Identities=19% Similarity=0.285 Sum_probs=278.6
Q ss_pred CcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHH
Q 014936 34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAI 113 (415)
Q Consensus 34 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al 113 (415)
+.++++|+.|.+. +++++.+++++.+.+.. ...|++.. ..++|+++|+++ ++++++|++|+|+++++
T Consensus 31 ~~~~i~l~~~~~~----~~~~~~~~~a~~~~~~~--~~~y~~~~-~~~lr~~ia~~~------~~~~~~i~~t~G~~~~l 97 (367)
T PRK02731 31 IADIIKLASNENP----LGPSPKAIEAIRAAADE--LHRYPDGS-GFELKAALAEKF------GVDPERIILGNGSDEIL 97 (367)
T ss_pred CCceEEecCCCCC----CCCCHHHHHHHHHHHHh--hcCCCCCc-HHHHHHHHHHHh------CcCHHHEEEcCCHHHHH
Confidence 5678999999864 45678899999888753 46788754 479999999998 56789999999999999
Q ss_pred HHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHH
Q 014936 114 DVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQ 193 (415)
Q Consensus 114 ~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~ 193 (415)
..++.+++++||+|+++.|+|..+...+...|+++..++. +++.+|++.+++.++++++++++++|+||||.+++.+
T Consensus 98 ~~~~~~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~---~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~ 174 (367)
T PRK02731 98 ELLARAYLGPGDEVIYSEHGFAVYPIAAQAVGAKPVEVPA---KDYGHDLDAMLAAVTPRTRLVFIANPNNPTGTYLPAE 174 (367)
T ss_pred HHHHHHhcCCCCEEEEecCCHHHHHHHHHHcCCeEEEecc---cCCCCCHHHHHHHhCCCCcEEEEeCCCCCCCcCCCHH
Confidence 9999999999999999999999888888899999998876 4567899999999988899999999999999999999
Q ss_pred HHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHH
Q 014936 194 HLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVE 273 (415)
Q Consensus 194 ~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~ 273 (415)
++.++++.|+ +|+++|+||+|..+.+.+.....+..++..+++++++||||.|+++|+|+||+++++ ++++
T Consensus 175 ~l~~l~~~~~-~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~l~~~~--------~~~~ 245 (367)
T PRK02731 175 EVERFLAGVP-PDVLVVLDEAYAEYVRRKDYEDGLELVAKFPNVVVTRTFSKAYGLAGLRVGYGIAPP--------EIID 245 (367)
T ss_pred HHHHHHHhCC-CCcEEEEECcHHHhccCcCcccHHHHHhhcCCEEEEeeehHhhcCcccceeeeeCCH--------HHHH
Confidence 9999999886 599999999999888755433333334445679999999999999999999999865 6777
Q ss_pred HHHhhccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCccccCCC
Q 014936 274 RMKKYFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLDDI 353 (415)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~~~~ 353 (415)
.+..... .+..++++|.++..+|+. ..++++.++.++++++.+.+.|+++ ++. + .|.+|+|+|++++..
T Consensus 246 ~l~~~~~-~~~~~~~~~~~a~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~-~~~~g~~~~i~~~~~----- 314 (367)
T PRK02731 246 ALNRVRQ-PFNVNSLALAAAVAALDD--DAFVEKSRALNAEGMAWLTEFLAEL-GLE-Y-IPSVGNFILVDFDDG----- 314 (367)
T ss_pred HHHHccC-CCCCCHHHHHHHHHHhCC--HHHHHHHHHHHHHHHHHHHHHHHHC-CCc-c-CCCCceEEEEECCCC-----
Confidence 7776543 345678899999999975 4678888999999999999999988 777 4 466789999988531
Q ss_pred CCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEeeCChhhHHHHHHHHHHHHH
Q 014936 354 IDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFAVDPYSLEECLDRIKSFYQ 406 (415)
Q Consensus 354 ~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~~~l~~~l~~l~~~~~ 406 (415)
.+..++...+ .++||.+.++..|+.++++|++++ +.++++.+++.|+++++
T Consensus 315 ~~~~~~~~~L-~~~gI~v~~~~~~~~~~~iRis~~-~~~e~~~l~~aL~~~~~ 365 (367)
T PRK02731 315 KDAAEAYQAL-LKRGVIVRPVAGYGLPNALRITIG-TEEENRRFLAALKEFLA 365 (367)
T ss_pred CCHHHHHHHH-HHCCEEEEeCCCCCCCCeEEEecC-CHHHHHHHHHHHHHHHh
Confidence 2566777766 467999999988876789999997 46788999999888764
No 84
>PRK03317 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=6.7e-44 Score=334.97 Aligned_cols=335 Identities=18% Similarity=0.288 Sum_probs=272.6
Q ss_pred ceeEecccCCCCCCCCCCcHHHHHHHHHHHhc--CCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHH
Q 014936 36 KVISLAMGDPTVHSCFHTTHVATEAVAEALLS--EKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAI 113 (415)
Q Consensus 36 ~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~--~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al 113 (415)
..++|+.|.|. +++++.+++++.+.+.. .....|++ .|.++||+++|+|+++.+|.++++++|++|+|+++++
T Consensus 27 ~~i~l~~~~~~----~~~~~~~~~al~~~l~~~~~~~~~Y~~-~g~~~lr~aia~~~~~~~~~~~~~~~I~it~G~~~~l 101 (368)
T PRK03317 27 VPVRLNTNENP----YPPSPALVADIAEAVAEAAAGLNRYPD-RDAVALRADLAAYLTAQTGVGLTVENVWAANGSNEIL 101 (368)
T ss_pred ceeEecCCCCC----CCCCHHHHHHHHHHHhhhhhhhccCCC-CchHHHHHHHHHHhhhhccCCCChhhEEECCCHHHHH
Confidence 46999999864 77889999999988753 24568876 5889999999999999889899999999999999999
Q ss_pred HHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcC-CCceEEEecCCCCccccCCCH
Q 014936 114 DVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLAD-QNTVALVIINPGNPCGNVYSY 192 (415)
Q Consensus 114 ~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~v~i~~p~nptG~~~~~ 192 (415)
..++.+++++||.|+++.|+|..+...++..|.++..++. ++++++|+++++++++ .+++++++++|+||||.+++.
T Consensus 102 ~~~~~~~~~~gd~v~v~~P~y~~~~~~~~~~g~~~~~~~~--~~~~~~d~~~l~~~~~~~~~~~i~l~~p~NPtG~~~~~ 179 (368)
T PRK03317 102 QQLLQAFGGPGRTALGFVPSYSMHPIIARGTHTEWVEGPR--AADFTLDVDAAVAAIAEHRPDVVFLTSPNNPTGTALPL 179 (368)
T ss_pred HHHHHHhcCCCCEEEEeCCChHHHHHHHHhcCCeeEEccc--CCCCCCCHHHHHHHHhccCCCEEEEeCCCCCCCCCCCH
Confidence 9999999999999999999999999999999998887765 3457899999999886 467889999999999999999
Q ss_pred HHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHH
Q 014936 193 QHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVV 272 (415)
Q Consensus 193 ~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~ 272 (415)
+++++|+++| ++++|+||+|.++.+.+.. ......+..+++++++||||.|+++|+|+||+++++ +++
T Consensus 180 ~~l~~l~~~~---~~~lI~DE~y~~~~~~~~~-~~~~~~~~~~~~i~~~SfSK~~g~~GlRiG~~~~~~--------~~~ 247 (368)
T PRK03317 180 DDVEAILDAA---PGIVVVDEAYAEFRRSGTP-SALTLLPEYPRLVVSRTMSKAFAFAGGRLGYLAAAP--------AVV 247 (368)
T ss_pred HHHHHHHHHC---CceEEEeCCchhhcccCCc-CHHHHHHhCCCEEEEEechhhhccchhhhhhhhCCH--------HHH
Confidence 9999999987 6899999999998765432 222223334579999999999999999999999865 688
Q ss_pred HHHHhhccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCccccCC
Q 014936 273 ERMKKYFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLDD 352 (415)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~~~ 352 (415)
+.++.... .+..++++|.++..+|+.. +.+.+.+++++++++.+.+.|++. ++. +..|.+++++|..++
T Consensus 248 ~~l~~~~~-~~~~s~~~~~a~~~~l~~~--~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~~~~~~~~~~~~------ 316 (368)
T PRK03317 248 DALRLVRL-PYHLSAVTQAAARAALRHA--DELLASVAALRAERDRVVAWLREL-GLR-VAPSDANFVLFGRFA------ 316 (368)
T ss_pred HHHHhcCC-CCCCCHHHHHHHHHHhhCH--HHHHHHHHHHHHHHHHHHHHHHHC-CCE-eCCCCCcEEEEeccC------
Confidence 88876543 4678889999999999752 445556677889999999999887 776 446777777775553
Q ss_pred CCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEeeCChhhHHHHHHHHHHHHHH
Q 014936 353 IIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFAVDPYSLEECLDRIKSFYQR 407 (415)
Q Consensus 353 ~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~~~l~~~l~~l~~~~~~ 407 (415)
+..++...+ .++||.+.+. +.++++||+++ +.++++.+++.|+++++.
T Consensus 317 --~~~~~~~~l-~~~Gv~v~~~---~~~~~iRi~~~-~~~~~~~~~~~l~~~~~~ 364 (368)
T PRK03317 317 --DRHAVWQGL-LDRGVLIRDV---GIPGWLRVTIG-TPEENDAFLAALAEVLAT 364 (368)
T ss_pred --CHHHHHHHH-HHCCEEEEeC---CCCCeEEEecC-CHHHHHHHHHHHHHHHHH
Confidence 355666655 5679999874 34689999997 456788888888887653
No 85
>PRK04870 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=6.7e-44 Score=333.62 Aligned_cols=327 Identities=19% Similarity=0.306 Sum_probs=269.9
Q ss_pred CcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCC-CcEEEeCChHHH
Q 014936 34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTP-NDVFVTSGCTQA 112 (415)
Q Consensus 34 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~-~~i~i~~g~~~a 112 (415)
+.++++|+.|.|. +++++.+++++.+.+.......|++ .|.++||+.+|++++ +.+ ++|++|+|++++
T Consensus 25 ~~~~i~l~~~~~~----~~~~~~~~~~~~~~~~~~~~~~Y~~-~~~~~lr~~ia~~~~------~~~~~~I~~t~G~~~~ 93 (356)
T PRK04870 25 ATGMVKLDAMENP----YRLPAELRAELGERLAEVALNRYPD-PRAAALKAALRAAMG------VPAGADVLLGNGSDEL 93 (356)
T ss_pred CCCceeCcCCCCC----CCCCHHHHHHHHHHhhccccccCCC-CCHHHHHHHHHHHhC------cCCCCcEEEcCCHHHH
Confidence 4679999999864 7889999999999886555668987 578999999999983 343 589999999999
Q ss_pred HHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCC-CceEEEecCCCCccccCCC
Q 014936 113 IDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ-NTVALVIINPGNPCGNVYS 191 (415)
Q Consensus 113 l~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~v~i~~p~nptG~~~~ 191 (415)
+..++.+++++||+|+++.|+|..+...++..|++++.++.+ .++.+|++.+++.+.+ +++++++++||||||.+++
T Consensus 94 i~~~~~~~~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~i~~~--~~~~~d~~~l~~~~~~~~~~~v~l~~p~NPtG~~~~ 171 (356)
T PRK04870 94 IQLLALACAKPGATVLAPEPGFVMYRMSAKLAGLEFVGVPLT--ADFTLDLPAMLAAIAEHRPALVFLAYPNNPTGNLFD 171 (356)
T ss_pred HHHHHHHhcCCCCEEEECCCCHHHHHHHHHHcCCEEEEecCC--CCCCCCHHHHHHHhhcCCCCEEEEcCCCCCCCCCCC
Confidence 999999999999999999999999999999999999999875 3467999999998864 7899999999999999999
Q ss_pred HHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHH
Q 014936 192 YQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKV 271 (415)
Q Consensus 192 ~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~ 271 (415)
.+++++|+++| +.++|+||+|..+.... .. ..+...+++++++|||| ++++|+|+||+++++ ++
T Consensus 172 ~~~~~~i~~~~---~~~ii~De~y~~~~~~~--~~--~~~~~~~~vi~~~S~SK-~~~~GlRiG~~i~~~--------~~ 235 (356)
T PRK04870 172 DADVERIIEAA---PGLVVVDEAYQPFAGDS--WL--PRLARFPNLLVMRTVSK-LGLAGLRLGYLAGHP--------AW 235 (356)
T ss_pred HHHHHHHHHHC---CCEEEEECCchhhcCcc--hH--HHHhhCCCEEEEecchh-hhhHHHhhhhhhCCH--------HH
Confidence 99999999998 67899999998865421 11 12334457999999999 799999999999865 67
Q ss_pred HHHHHhhccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCccccC
Q 014936 272 VERMKKYFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLD 351 (415)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~~ 351 (415)
++.+..... .+..+.++|.++..++++ .+++++.+++++++++.+.+.|++++++. + .|.+|+|+|++++
T Consensus 236 i~~~~~~~~-~~~~~~~~q~~a~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~~~~~-~-~~~~~~~~~~~~~----- 305 (356)
T PRK04870 236 IAELDKVRP-PYNVNVLTQATALFALEH--VDVLDAQAAQLRAERTRLAAALAALPGVT-V-FPSAANFILVRVP----- 305 (356)
T ss_pred HHHHHHccC-CCcCCHHHHHHHHHHHhC--HHHHHHHHHHHHHHHHHHHHHHHhCCCcE-E-CCCCCeEEEEECC-----
Confidence 777776543 356778889888888864 35688888999999999999999988876 4 5777889999875
Q ss_pred CCCCHHHHHHHHHhhcCeEEEcCCCCCC--CCeEEEEeeCChhhHHHHHHHHHHH
Q 014936 352 DIIDDIDFCFKLAKEESVIILPGTAVGL--KNWLRVTFAVDPYSLEECLDRIKSF 404 (415)
Q Consensus 352 ~~~~~~~~~~~ll~~~gi~v~~g~~~~~--~~~iRi~~~~~~~~l~~~l~~l~~~ 404 (415)
+..++.. .++++||.+.|+..|+. ++++||+++. .++.+.+++.|.++
T Consensus 306 ---~~~~~~~-~l~~~gI~v~~~~~f~~~~~~~iRis~~~-~~~~~~l~~al~~~ 355 (356)
T PRK04870 306 ---DAAAVFD-GLKTRGVLVKNLSGMHPLLANCLRVTVGT-PEENAQFLAALKAA 355 (356)
T ss_pred ---CHHHHHH-HHHHCCEEEEECCCCCCCCCCeEEEeCCC-HHHHHHHHHHHHHh
Confidence 2455554 45788999999988753 6799999984 56667777777654
No 86
>PRK08153 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=3.4e-43 Score=329.48 Aligned_cols=333 Identities=17% Similarity=0.218 Sum_probs=272.3
Q ss_pred ceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHH
Q 014936 36 KVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDV 115 (415)
Q Consensus 36 ~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~ 115 (415)
.+++|+.|++. +++++.+.+++.+... ....|+++ +..+||++||+++ ++++++|++|+|+++++..
T Consensus 33 ~~~~l~~~~~~----~~~~~~~~~a~~~~~~--~~~~Y~~~-~~~~Lr~~ia~~~------~~~~~~I~it~G~~~~l~~ 99 (369)
T PRK08153 33 FRARIGANESG----FGPSPSVIAAMREAAA--EIWKYGDP-ENHDLRHALAAHH------GVAPENIMVGEGIDGLLGL 99 (369)
T ss_pred ceeEecCCCCC----CCCCHHHHHHHHHHHH--HhhcCCCC-ccHHHHHHHHHHh------CCCHHHEEEcCCHHHHHHH
Confidence 45699999864 7788999999988764 23578876 5799999999998 5788999999999999999
Q ss_pred HHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhc-CCCceEEEecCCCCccccCCCHHH
Q 014936 116 AMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLA-DQNTVALVIINPGNPCGNVYSYQH 194 (415)
Q Consensus 116 ~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~v~i~~p~nptG~~~~~~~ 194 (415)
++.+++++||.|++++|+|+.+...+...|.+++.++.+. ..+|++.+++.+ +++++++++++|+||||.++|.++
T Consensus 100 ~~~~~~~~gd~vlv~~p~y~~~~~~~~~~g~~~~~vp~~~---~~~~~~~l~~~~~~~~~~~i~l~~P~NPtG~~~~~~~ 176 (369)
T PRK08153 100 IVRLYVEPGDPVVTSLGAYPTFNYHVAGFGGRLVTVPYRD---DREDLDALLDAARRENAPLVYLANPDNPMGSWHPAAD 176 (369)
T ss_pred HHHHhcCCCCEEEECCCcchHHHHHHHHcCCeEEEeeCCC---CCCCHHHHHHHhcccCCcEEEEeCCCCCCCCCCCHHH
Confidence 9999999999999999999999988888999999988743 247899987765 457889999999999999999999
Q ss_pred HHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHHH
Q 014936 195 LQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVER 274 (415)
Q Consensus 195 l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~ 274 (415)
+++++++|++ ++++|+||+|..+.+++. ..++.. ..+++++++||||.|+++|+|+||+++++ ++++.
T Consensus 177 l~~l~~~~~~-~~~lI~DE~y~~~~~~~~-~~~~~~--~~~~~i~~~SfSK~~g~~GlRiG~~v~~~--------~~~~~ 244 (369)
T PRK08153 177 IVAFIEALPE-TTLLVLDEAYCETAPAGA-APPIDT--DDPNVIRMRTFSKAYGLAGARVGYAIGAP--------GTIKA 244 (369)
T ss_pred HHHHHHhCCC-CcEEEEeCchhhhcCccc-chhhhh--cCCCEEEEecchHhccCcchheeeeecCH--------HHHHH
Confidence 9999999874 899999999999876542 222222 23579999999999999999999999865 67777
Q ss_pred HHhhccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCccccCCCC
Q 014936 275 MKKYFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLDDII 354 (415)
Q Consensus 275 ~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~~~~~ 354 (415)
+..... .++.++++|.++..+|++ ..++++.++.++++++.+.+.|++. ++. . .|.+++|+|++++.. ..
T Consensus 245 l~~~~~-~~~~s~~~q~~~~~~l~~--~~~~~~~~~~~~~~r~~~~~~L~~~-g~~-~-~p~~~~f~~~~~~~~----~~ 314 (369)
T PRK08153 245 FDKVRN-HFGMNRIAQAAALAALKD--QAYLAEVVGKIAAARDRIAAIARAN-GLT-P-LPSATNFVAIDCGRD----GA 314 (369)
T ss_pred HHHhhc-CCCCCHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHHHHHC-CCc-c-CCCcCcEEEEECCCC----cc
Confidence 776554 357889999999999974 4778888999999999999999987 666 4 588899999987521 11
Q ss_pred CHHHHHHHHHhhcCeEEE-cCCCCCCCCeEEEEeeCChhhHHHHHHHHHHHHHHHH
Q 014936 355 DDIDFCFKLAKEESVIIL-PGTAVGLKNWLRVTFAVDPYSLEECLDRIKSFYQRHA 409 (415)
Q Consensus 355 ~~~~~~~~ll~~~gi~v~-~g~~~~~~~~iRi~~~~~~~~l~~~l~~l~~~~~~~~ 409 (415)
...++..+++ ++||.+. |+.. ..++++|++++ ++++++.+++.|++++...+
T Consensus 315 ~a~~l~~~l~-~~Gi~v~~p~~~-~~~~~iRis~~-~~~~~~~~~~al~~~~~~~~ 367 (369)
T PRK08153 315 FARAVLDGLI-ARDIFVRMPGVA-PLDRCIRVSCG-PDEELDLFAEALPEALEAAR 367 (369)
T ss_pred cHHHHHHHHH-HCCeEEeeCCCC-CCCCeEEEecC-CHHHHHHHHHHHHHHHHHhh
Confidence 3456666654 5799995 6643 23579999998 57899999999998886543
No 87
>PRK08637 hypothetical protein; Provisional
Probab=100.00 E-value=4.3e-43 Score=331.27 Aligned_cols=356 Identities=19% Similarity=0.265 Sum_probs=265.6
Q ss_pred eeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCC---CCcEEEeCChHHHH
Q 014936 37 VISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLT---PNDVFVTSGCTQAI 113 (415)
Q Consensus 37 ~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~---~~~i~i~~g~~~al 113 (415)
.+|.+.|.........+.+.+++++.+. .......|+++.|.++||+.+++++.+..+ ... .++|++|+|+++++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~~-~~~~~~~~~I~it~G~~~al 82 (388)
T PRK08637 5 KYNATIGMATEKGGPMYLSSLQDLLNDL-TPDEIFPYAPPQGIPELRDLWQEKMLRENP-SLSGKKMSLPIVTNALTHGL 82 (388)
T ss_pred ceecceeeEecCCCcchHHHHHHHHHhh-ccccccCCCCCCCCHHHHHHHHHHHhccCc-cccccccceeeEccchHHHH
Confidence 4666666543222222334444444432 223456899999999999999999876543 222 36899999999999
Q ss_pred HHHHHHhcCCCCEEEEcCCCCcchHHHHH-hCCCeEEEeeccCCCCCCCChhHHHhhcC----CCceEEEecCCCCcccc
Q 014936 114 DVAMALLSRPGANILLPRPGFPIYELSAA-FRHIEVRHFDLLPDKGWEVDLDDIESLAD----QNTVALVIINPGNPCGN 188 (415)
Q Consensus 114 ~~~~~~l~~~gd~vi~~~p~y~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~l~~~~~----~~~~~v~i~~p~nptG~ 188 (415)
.+++.+++++||.|++++|+|+.+...+. ..|.+++.++... +++++|++++++.++ +.++++++++||||||.
T Consensus 83 ~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~g~~vv~v~~~~-~~~~~d~~~l~~~~~~~~~~~~~~~~~~~P~NPTG~ 161 (388)
T PRK08637 83 SLVADLFVDQGDTVLLPDHNWGNYKLTFNTRRGAEIVTYPIFD-EDGGFDTDALKEALQAAYNKGKVIVILNFPNNPTGY 161 (388)
T ss_pred HHHHHHhcCCCCEEEEcCCCCccHHHHHHHhcCCEEEEecccC-CCCcCCHHHHHHHHHhhccCCCEEEEEeCCCCCCCC
Confidence 99999999999999999999999998754 6899999998732 234689999988876 45566788899999999
Q ss_pred CCCHHHHHHHHHHHhh-----cCcEEEEccccCCcccCCCCcccc-ccc-CCCCCe--EEEccCccccCCCCceEEEEEe
Q 014936 189 VYSYQHLQKLAETANK-----LKTLVIADEVYGHLVFGDKPFVPM-GVF-GSTVPI--LTLGSLSKRWIVPGWRLGWFVT 259 (415)
Q Consensus 189 ~~~~~~l~~i~~~~~~-----~~~~li~De~~~~~~~~~~~~~~~-~~~-~~~~~~--i~~~s~sK~~~~~G~r~G~~~~ 259 (415)
+++.+++++|+++|++ ++++||+||+|.++.+++....++ ..+ +..+++ ++++|+||.|++||+|+||+++
T Consensus 162 ~~s~~~~~~l~~~~~~~~~~~~~~~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~vi~i~~~s~SK~~~~pGlRlG~~~~ 241 (388)
T PRK08637 162 TPTEKEATAIVEAIKELADAGTKVVAVVDDAYFGLFYEDSYKESLFAALANLHSNILAVKLDGATKEEFVWGFRVGFITF 241 (388)
T ss_pred CCCHHHHHHHHHHHHHHHhcCCcEEEEecccchhcccCCccchhhHHHhhcccccceEEEeccccccCCCcccceEEEEE
Confidence 9999999999998875 899999999999998876544332 222 233464 4567999999999999999997
Q ss_pred eCCCCCCChHHHHHHHHhh----c-cccCCchhHHHHHHHHhhCCCc-HHHHHHHHHHHHHHHHHHHHHhhcC---CCCc
Q 014936 260 TDPCGMFRKPKVVERMKKY----F-DILGDPATFIQAAVPSILQQPD-EVFFKKTLNLLKQSVDICYNKIKEI---PCIS 330 (415)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~----~-~~~~~~~~~~~~a~~~~l~~~~-~~~~~~~~~~~~~~~~~l~~~l~~~---~~~~ 330 (415)
+.+.. .++++.+.+... . ....+++.+.|.++..+|++.. ..++.+.+..++++++.+.+.|+.. +++.
T Consensus 242 ~~~~~--~~~~l~~~~~~~~~~~~~~~~~~~s~~~q~a~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~l~~~~~~~~~~ 319 (388)
T PRK08637 242 GTKAG--SSQTVKEALEKKVKGLIRSNISNGPHPSQSAVLRALNSPEFDKEKQEKFQILKERYEKTKEVLYDGKYDDAWQ 319 (388)
T ss_pred ccccC--CcHHHHHHHHHHHHHHhhcccCCCCcHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCcc
Confidence 53100 012566666532 1 1234678899999999997632 2445566677888888888888754 2466
Q ss_pred CCCCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEee-CChhhHHHHHHHHHHHHHHH
Q 014936 331 CPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFA-VDPYSLEECLDRIKSFYQRH 408 (415)
Q Consensus 331 ~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~-~~~~~l~~~l~~l~~~~~~~ 408 (415)
+..|.+|+|+|++++. .++.+++..+++++||.+.+. .++++||+++ .+++++++++++|.++++++
T Consensus 320 -~~~~~~g~~~~~~l~~------~~~~~l~~~l~~~~gv~~~~~----~~~~iRi~~~~~~~~~i~~~~~~l~~~~~~~ 387 (388)
T PRK08637 320 -AYPFNSGYFMCLKLKG------VDAEELRVHLLEKYGIGTIAL----NETDLRIAFSCVEEEDIPELFDSIYKAIKDL 387 (388)
T ss_pred -cccccceEEEEecCCh------HHHHHHHHHHhhhcceEEEec----cCCceEEEeecCCHHHHHHHHHHHHHHHHhc
Confidence 4478899999998862 146778888877889988753 2578999996 57899999999999998764
No 88
>PRK05387 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=2.6e-43 Score=329.71 Aligned_cols=328 Identities=19% Similarity=0.329 Sum_probs=267.2
Q ss_pred CcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHH
Q 014936 34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAI 113 (415)
Q Consensus 34 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al 113 (415)
.+++++|+.|.+. +++++.+.+++.+.+... ...|++. +.++||++||+++ ++++++|++|+|+++++
T Consensus 23 ~~~~i~l~~~~~~----~~~~~~~~~a~~~~~~~~-~~~y~~~-~~~~lr~aia~~~------~~~~~~I~it~G~~~al 90 (353)
T PRK05387 23 LAKLIKLNTNENP----YPPSPKVLEAIRAALGDD-LRLYPDP-NADALRQAIAAYY------GLDPEQVFVGNGSDEVL 90 (353)
T ss_pred ccceeeccCCCCC----CCCCHHHHHHHHHHhhhh-hhcCCCC-cHHHHHHHHHHHh------CCCHHHEEEcCCHHHHH
Confidence 4578999999965 666889999998877643 4578765 6699999999998 47899999999999999
Q ss_pred HHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHH
Q 014936 114 DVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQ 193 (415)
Q Consensus 114 ~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~ 193 (415)
.+++++++++||+|++++|+|+.+...++..|+++..++.+ .++.+|++++++ .++++++++||||||.++|.+
T Consensus 91 ~~~~~~l~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~----~~~~v~~~~P~NPtG~~~~~~ 164 (353)
T PRK05387 91 AHAFLAFFNHDRPLLFPDITYSFYPVYAGLYGIPYEEIPLD--DDFSIDVEDYLR----PNGGIIFPNPNAPTGIALPLA 164 (353)
T ss_pred HHHHHHhcCCCCEEEEeCCCHHHHHHHHHHcCCEEEEeecC--CCCCCCHHHHHh----cCCEEEEeCCCCCCCCCCCHH
Confidence 99999999999999999999999999999999999999874 356789999874 356789999999999999999
Q ss_pred HHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHH
Q 014936 194 HLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVE 273 (415)
Q Consensus 194 ~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~ 273 (415)
++++|+++++ ++++|+||+|..+. +....++ ....+++++++||||.|+++|+|+||+++++ ++++
T Consensus 165 ~~~~l~~~~~--~~~livDe~y~~~~--~~~~~~~--~~~~~~~i~~~S~SK~~~~~GlR~G~~~~~~--------~~~~ 230 (353)
T PRK05387 165 EIERILAANP--DSVVVIDEAYVDFG--GESAIPL--IDRYPNLLVVQTFSKSRSLAGLRVGFAIGHP--------ELIE 230 (353)
T ss_pred HHHHHHHhCC--CcEEEEeCcccccC--CcchHHH--HhhCCCEEEEEehhHhhcchhhhceeeecCH--------HHHH
Confidence 9999999764 89999999998753 3222222 2334679999999999999999999999854 6777
Q ss_pred HHHhhccc--cCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCccccC
Q 014936 274 RMKKYFDI--LGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLD 351 (415)
Q Consensus 274 ~~~~~~~~--~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~~ 351 (415)
.++..... .++.+.+.|.++..++.+ .+++++.+++++++++.+.+.|+++ ++. + .|.+++|+|++++.
T Consensus 231 ~l~~~~~~~~~~~~~~~~q~~~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~-~~~~~~~~~~~~~~---- 301 (353)
T PRK05387 231 ALNRVKNSFNSYPLDRLAQAGAIAAIED--EAYFEETRAKVIATRERLVEELEAL-GFE-V-LPSKANFVFARHPS---- 301 (353)
T ss_pred HHHHhhccCCCCCcCHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHHHHHC-CCe-E-CCCcCcEEEEECCC----
Confidence 77766432 356788899999888864 4678888999999999999999988 776 4 57778899988763
Q ss_pred CCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEeeCChhhHHHHHHHHHHHHH
Q 014936 352 DIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFAVDPYSLEECLDRIKSFYQ 406 (415)
Q Consensus 352 ~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~~~l~~~l~~l~~~~~ 406 (415)
.+..++...+ .++||.+.+......++++||+++ +.++++.+++.|++++.
T Consensus 302 --~~~~~~~~~l-~~~gi~v~~~~~~~~~~~iRis~~-~~~~~~~~~~~L~~~~~ 352 (353)
T PRK05387 302 --HDAAELAAKL-RERGIIVRHFNKPRIDQFLRITIG-TDEEMEALVDALKEILA 352 (353)
T ss_pred --CCHHHHHHHH-HHCCEEEEECCCCCCCCeEEEEeC-CHHHHHHHHHHHHHHhh
Confidence 2566777776 567999976433334679999997 56889999999988754
No 89
>PRK09105 putative aminotransferase; Provisional
Probab=100.00 E-value=5.1e-43 Score=327.69 Aligned_cols=324 Identities=16% Similarity=0.180 Sum_probs=261.7
Q ss_pred cceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHH
Q 014936 35 KKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAID 114 (415)
Q Consensus 35 ~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~ 114 (415)
+++++|+.|.|. +++++.+.+++.+.+.. ...|+++ +.++||+.|++++ ++++++|++|+|+++++.
T Consensus 43 ~~~i~l~~~~~~----~~~~~~~~~a~~~~~~~--~~~Y~~~-~~~~Lr~aia~~~------~v~~e~I~it~Gs~~ai~ 109 (370)
T PRK09105 43 EGAVFLNANECP----LGPSPAARDAAARSAAL--SGRYDLE-LEDDLRTLFAAQE------GLPADHVMAYAGSSEPLN 109 (370)
T ss_pred CCcEEecCCCCC----CCCCHHHHHHHHHHHHH--hcCCCCc-hHHHHHHHHHHHh------CcChhhEEEcCChHHHHH
Confidence 457999999864 77889999999887653 2468775 4899999999987 578999999999999999
Q ss_pred HHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHH
Q 014936 115 VAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQH 194 (415)
Q Consensus 115 ~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~ 194 (415)
.++.+++++||+|++++|+|+.+...++..|++++.++.++ ++.+|++.+++. .++++++++++||||||.+++.++
T Consensus 110 ~~~~~l~~~gd~Vli~~P~y~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~-~~~~~~v~l~nP~NPTG~~~~~~~ 186 (370)
T PRK09105 110 YAVLAFTSPTAGLVTADPTYEAGWRAADAQGAPVAKVPLRA--DGAHDVKAMLAA-DPNAGLIYICNPNNPTGTVTPRAD 186 (370)
T ss_pred HHHHHHcCCCCEEEEeCCChHHHHHHHHHcCCeEEEecCCC--CCCCCHHHHHhc-CCCCCEEEEeCCCCCCCcCcCHHH
Confidence 99999999999999999999999999999999999998753 467899999876 457889999999999999999999
Q ss_pred HHHHHHHHhhcCcEEEEccccCCcccCCCCccccccc-CCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHH
Q 014936 195 LQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVF-GSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVE 273 (415)
Q Consensus 195 l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~-~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~ 273 (415)
++++++.++ +++++|+||+|..+... . +...+ +..+++++++||||.|+++|+|+||+++++ ++++
T Consensus 187 l~~l~~~~~-~~~~lIvDEaY~~f~~~---~-s~~~~~~~~~~vi~~~SfSK~~g~~GlRiG~~v~~~--------~~i~ 253 (370)
T PRK09105 187 IEWLLANKP-AGSVLLVDEAYIHFSDA---P-SVVDLVAQRKDLIVLRTFSKLYGMAGMRLGLAAARP--------DLLA 253 (370)
T ss_pred HHHHHHhCC-CCcEEEEECchHHhccC---c-chHHHHhhCCCEEEEecccHhhcCCccceeeeecCH--------HHHH
Confidence 999999764 58999999999875421 1 22222 335689999999999999999999999865 6777
Q ss_pred HHHhhccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCccccCCC
Q 014936 274 RMKKYFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLDDI 353 (415)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~~~~ 353 (415)
.+... . ....+...|.++..+|.+ ..++++.+++++++++.+.+.|+++ ++. +..|+++ |++++++.
T Consensus 254 ~l~~~-~-~~~~~~~~~~aa~~~L~~--~~~~~~~~~~~~~~r~~l~~~L~~~-g~~-~~~~~~~-f~~~~~~~------ 320 (370)
T PRK09105 254 KLARF-G-HNPLPVPAAAAGLASLRD--PKLVPQRRAENAAVREDTIAWLKKK-GYK-CTPSQAN-CFMVDVKR------ 320 (370)
T ss_pred HHHhc-C-CCCcCHHHHHHHHHHHhC--HHHHHHHHHHHHHHHHHHHHHHHHC-CCC-cCCCCCc-EEEEeCCC------
Confidence 77665 2 345777788888888865 5788899999999999999999987 777 4355555 55676642
Q ss_pred CCHHHHHHHHHhhcCeEEEcCCCCC-CCCeEEEEeeCChhhHHHHHHHHHHHH
Q 014936 354 IDDIDFCFKLAKEESVIILPGTAVG-LKNWLRVTFAVDPYSLEECLDRIKSFY 405 (415)
Q Consensus 354 ~~~~~~~~~ll~~~gi~v~~g~~~~-~~~~iRi~~~~~~~~l~~~l~~l~~~~ 405 (415)
+..++...+++ +||.+. ..|. .++++||+++. +++++.+++.|++++
T Consensus 321 -~~~~l~~~L~~-~gI~v~--~~~~~~~~~~Ris~~~-~~~~~~l~~al~~~~ 368 (370)
T PRK09105 321 -PAKAVADAMAK-QGVFIG--RSWPIWPNWVRVTVGS-EEEMAAFRSAFAKVM 368 (370)
T ss_pred -CHHHHHHHHHH-CCcEEe--cCCCCCCCeEEEEcCC-HHHHHHHHHHHHHHh
Confidence 46778787765 599983 3343 36899999984 566787777777654
No 90
>PRK14807 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=1.4e-42 Score=323.60 Aligned_cols=325 Identities=19% Similarity=0.329 Sum_probs=261.7
Q ss_pred ceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHH
Q 014936 36 KVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDV 115 (415)
Q Consensus 36 ~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~ 115 (415)
..++|+.|.|+ +++++.+.+++.+.+.......|++. +..++|+++|+++ ++++++|++|+|+++++..
T Consensus 23 ~~~~l~~~~~~----~~~p~~~~~a~~~~~~~~~~~~y~~~-~~~~lr~~ia~~~------~~~~~~i~it~G~~~~l~~ 91 (351)
T PRK14807 23 YKYKMDANETP----FELPEEVIKNIQEIVKSSQVNIYPDP-TAEKLREELARYC------SVVPTNIFVGNGSDEIIHL 91 (351)
T ss_pred ceeEccCCCCC----CCCCHHHHHHHHHHhhcCcccCCCCc-cHHHHHHHHHHHh------CCCcccEEEecCHHHHHHH
Confidence 56899999874 77889999999887765455678864 5699999999998 5788999999999999999
Q ss_pred HHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCC-CceEEEecCCCCccccCCCHHH
Q 014936 116 AMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ-NTVALVIINPGNPCGNVYSYQH 194 (415)
Q Consensus 116 ~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~v~i~~p~nptG~~~~~~~ 194 (415)
++.+++++||+|++++|+|..+...++..|++++.++.+ .++.+|++.+++++++ +++++++++|+||||.+++.++
T Consensus 92 ~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~~~~~~~k~v~l~~p~NPtG~~~~~~~ 169 (351)
T PRK14807 92 IMLAFINKGDVVIYPHPSFAMYSVYSKIAGAVEIPVKLK--EDYTYDVGSFIKVIEKYQPKLVFLCNPNNPTGSVIERED 169 (351)
T ss_pred HHHHhcCCCCEEEEeCCChHHHHHHHHHcCCeEEEeecC--CCCCCCHHHHHHHhhccCCCEEEEeCCCCCCCCCCCHHH
Confidence 999999999999999999999999899999999999875 3467899999998875 7899999999999999999888
Q ss_pred HHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHHH
Q 014936 195 LQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVER 274 (415)
Q Consensus 195 l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~ 274 (415)
+.++++ +++.++|+||+|..+. +....+ .+...+++|+++||||.|+++|+|+||++++. ++++.
T Consensus 170 l~~l~~---~~~~~~ivDe~y~~~~--~~~~~~--~~~~~~~vi~~~S~SK~~~~~GlRiG~~v~~~--------~~~~~ 234 (351)
T PRK14807 170 IIKIIE---KSRGIVVVDEAYFEFY--GNTIVD--VINEFENLIVLRTLSKAFGLAGLRVGYAVANE--------NILKY 234 (351)
T ss_pred HHHHHH---hCCCEEEEeCcchhhc--ccchHH--HhhhCCCEEEEecchHhcccchhceeeeecCH--------HHHHH
Confidence 888876 4467899999998763 322222 12334689999999999999999999999864 68888
Q ss_pred HHhhccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCccccCCCC
Q 014936 275 MKKYFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLDDII 354 (415)
Q Consensus 275 ~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~~~~~ 354 (415)
+..... .+..+.++|.++..+|++ .+++++.+.++++++.+.+.|++++++. + .|.+|+|+|++++
T Consensus 235 ~~~~~~-~~~~~~~~q~~~~~~l~~---~~~~~~~~~~~~~r~~l~~~l~~~~g~~-~-~~~~~~~~~i~~~-------- 300 (351)
T PRK14807 235 LNLVKS-PYNINSLSQVIALKVLRT---GVLKERVNYILNERERLIKELSKIPGIK-V-YPSKTNFILVKFK-------- 300 (351)
T ss_pred HHHccC-CCCcCHHHHHHHHHHHhH---HHHHHHHHHHHHHHHHHHHHHHhCCCcE-E-CcCCccEEEEEcC--------
Confidence 876543 355678899999999974 5677888888999999999998887877 5 5667889999885
Q ss_pred CHHHHHHHHHhhcCeEEEcCCC-CCCCCeEEEEeeCChhhHHHHHHHHHHH
Q 014936 355 DDIDFCFKLAKEESVIILPGTA-VGLKNWLRVTFAVDPYSLEECLDRIKSF 404 (415)
Q Consensus 355 ~~~~~~~~ll~~~gi~v~~g~~-~~~~~~iRi~~~~~~~~l~~~l~~l~~~ 404 (415)
+..++...+ .++||.+.++.. ++.++++||+++.+ ++.+.+++.|+++
T Consensus 301 ~~~~~~~~l-~~~gV~v~~~~~~~~~~~~iRis~~~~-~~~~~l~~~l~~~ 349 (351)
T PRK14807 301 DADYVYQGL-LERGILVRDFSKVEGLEGALRITVSSC-EANDYLINGLKEL 349 (351)
T ss_pred CHHHHHHHH-HHCCEEEEECCCCCCCCCeEEEEcCCH-HHHHHHHHHHHHh
Confidence 345555555 567999988653 34478999999753 4456666666543
No 91
>PRK04781 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=2.4e-42 Score=322.86 Aligned_cols=325 Identities=18% Similarity=0.294 Sum_probs=256.7
Q ss_pred ceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHH
Q 014936 36 KVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDV 115 (415)
Q Consensus 36 ~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~ 115 (415)
..++++.+.+. +++++.. . ..+..|+++ +..+||+++|+++ ++++++|++|+|+++++..
T Consensus 32 ~~~~~~~ne~~----~~~~~~~-------~--~~~~~Y~~~-~~~~lr~~ia~~~------~~~~~~I~~t~G~~~~l~~ 91 (364)
T PRK04781 32 GDVWLNANESA----WANPADP-------D--ASTRRYPDP-QPPGLRSALAALY------GCAPEQLLIGRGSDEAIDL 91 (364)
T ss_pred CCEEeeCCCCC----CCCChhh-------c--chhccCCCC-CHHHHHHHHHHHh------CcChHHEEEeCCHHHHHHH
Confidence 45788887643 3444320 1 124578876 4699999999998 5789999999999999999
Q ss_pred HHHHhcCCC-CEEEEcCCCCcchHHHHHhCCCeEEEeeccC-CCCCCCChhHHHhh-cCCCceEEEecCCCCccccCCCH
Q 014936 116 AMALLSRPG-ANILLPRPGFPIYELSAAFRHIEVRHFDLLP-DKGWEVDLDDIESL-ADQNTVALVIINPGNPCGNVYSY 192 (415)
Q Consensus 116 ~~~~l~~~g-d~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~-~~~~~~~~~~l~~~-~~~~~~~v~i~~p~nptG~~~~~ 192 (415)
++.+++++| |.|++++|+|..+...++..|.+++.++.+. ++++.+|++++++. ..++++++++++||||||.+++.
T Consensus 92 ~~~~~~~~g~~~vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~~~~~~~~lv~l~~p~NPTG~~~~~ 171 (364)
T PRK04781 92 LVRALCVPGRDAVLVTPPVFGMYAVCARLQNAPLVEVPLVDGADGFHADVPAIVAAALASNAKLVFLCSPSNPAGSAIAL 171 (364)
T ss_pred HHHHhcCCCCCeEEEcCCChHHHHHHHHHcCCEEEEEecCCCccCCCcCHHHHHHHHhccCCeEEEEcCCCCCCCCCcCH
Confidence 999999898 7999999999989888899999999999743 34567889988654 45678999999999999999999
Q ss_pred HHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHH
Q 014936 193 QHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVV 272 (415)
Q Consensus 193 ~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~ 272 (415)
+++.+++++|++ ++++|+||+|.++.+... .....+..+++++++||||+|+++|+|+||+++++ +++
T Consensus 172 ~~~~~l~~~~~~-~~~iI~Deay~~f~~~~~---~~~~~~~~~~vi~~~SfSK~~gl~GlRvGy~v~~~--------~l~ 239 (364)
T PRK04781 172 DQIERALQALQG-KALVVVDEAYGEFSDVPS---AVGLLARYDNLAVLRTLSKAHALAAARIGSLIANA--------ELI 239 (364)
T ss_pred HHHHHHHHhCCC-CcEEEEeCcchhhcCCcc---hHHHHhhCCCEEEEecChhhcccccceeeeeeCCH--------HHH
Confidence 999999999864 789999999999875321 12223445689999999999999999999999865 688
Q ss_pred HHHHhhccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCccccCC
Q 014936 273 ERMKKYFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLDD 352 (415)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~~~ 352 (415)
+.++.... .+..+.+.|.++..+|++....+..+..+.++++++.+.+.|++++++..+ .|.+|+|+|++++
T Consensus 240 ~~l~~~~~-~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~-~p~~g~f~~~~~~------ 311 (364)
T PRK04781 240 AVLRRCQA-PYPVPTPCAALAEQALSAPALAVTARRVAEVRAERERLHAALAQLPGVRRV-YPSQGNFLLVRFD------ 311 (364)
T ss_pred HHHHhccC-CCCCCHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHhCCCCCeE-CCCCCcEEEEEcC------
Confidence 88877654 356778888888889976544566677778899999999999988776423 6888999999885
Q ss_pred CCCHHHHHHHHHhhcCeEEEcCCCC-CCCCeEEEEeeCChhhHHHHHHHHHHH
Q 014936 353 IIDDIDFCFKLAKEESVIILPGTAV-GLKNWLRVTFAVDPYSLEECLDRIKSF 404 (415)
Q Consensus 353 ~~~~~~~~~~ll~~~gi~v~~g~~~-~~~~~iRi~~~~~~~~l~~~l~~l~~~ 404 (415)
+..++... +.++||.+.||..| +.++++||+++. .++.+.+++.|+++
T Consensus 312 --~~~~~~~~-l~~~gI~v~~~~~~~~~~~~~Ris~~~-~~~~~~l~~al~~~ 360 (364)
T PRK04781 312 --DAEAAFQA-LLAAGVVVRDQRAAPRLSDALRITLGT-PEQNDRVLAALQRT 360 (364)
T ss_pred --CHHHHHHH-HHHCCeEEeeCCCCCCCCCeEEEeCCC-HHHHHHHHHHHHHH
Confidence 34555555 46789999999865 346899999975 45556666666554
No 92
>PRK01688 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=5e-43 Score=326.11 Aligned_cols=321 Identities=21% Similarity=0.334 Sum_probs=259.1
Q ss_pred cceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHH
Q 014936 35 KKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAID 114 (415)
Q Consensus 35 ~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~ 114 (415)
...++|+.+.+. +++++.+ .......|+++. ..++++.+++++ ++++++|++|+|+++++.
T Consensus 28 ~~~~~l~~Nenp----~~~~~~~--------~~~~~~~Yp~~~-~~~l~~~~a~~~------g~~~~~I~~~~Gs~e~i~ 88 (351)
T PRK01688 28 NGDVWLNANEYP----TAVEFQL--------TQQTLNRYPECQ-PKAVIENYAAYA------GVKPEQVLVSRGADEGIE 88 (351)
T ss_pred CCceEecCCCCC----CCCChhh--------cccccccCCCCC-hHHHHHHHHHHh------CCCHHHEEEcCCHHHHHH
Confidence 346999999854 4445532 112456798754 479999999998 679999999999999999
Q ss_pred HHHHHhcCCC-CEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHH
Q 014936 115 VAMALLSRPG-ANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQ 193 (415)
Q Consensus 115 ~~~~~l~~~g-d~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~ 193 (415)
.++.+++++| |+|+++.|+|..|...++..|++++.++.+. ++.+|++.+++++ +++++++++|||||||.+++.+
T Consensus 89 ~~~~~~~~~g~~~vli~~P~y~~y~~~~~~~G~~~~~v~~~~--~~~~d~~~l~~~~-~~~~lv~l~nPnNPTG~~~~~~ 165 (351)
T PRK01688 89 LLIRAFCEPGKDAILYCPPTYGMYSVSAETIGVEIRTVPTLD--NWQLDLPAIADNL-DGVKVVYVCSPNNPTGNLINPQ 165 (351)
T ss_pred HHHHHhcCCCCCEEEEcCCCHHHHHHHHHHcCCEEEEeecCC--CCCCCHHHHHHhc-cCCcEEEEeCCCCCCCCCCCHH
Confidence 9999999887 8999999999999999999999999998753 4789999999887 5789999999999999999999
Q ss_pred HHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHH
Q 014936 194 HLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVE 273 (415)
Q Consensus 194 ~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~ 273 (415)
++++|++.|++ +.++|+||+|.++.... .....+...+++++++||||+|+++|+|+||+++++ ++++
T Consensus 166 ~l~~l~~~~~~-~~~vivDEay~~f~~~~---s~~~~~~~~~n~iv~rSfSK~~glaGlRiGy~i~~~--------~~i~ 233 (351)
T PRK01688 166 DLRTLLELTRG-KAIVVADEAYIEFCPQA---SLAGWLAEYPHLVILRTLSKAFALAGLRCGFTLANE--------EVIN 233 (351)
T ss_pred HHHHHHHhCCC-CcEEEEECchhhcCCCC---ChHHHHhhCCCEEEEecchHhhcCHHHHHhHHhCCH--------HHHH
Confidence 99999999986 68899999999876321 111222345689999999999999999999999864 6888
Q ss_pred HHHhhccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCccccCCC
Q 014936 274 RMKKYFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLDDI 353 (415)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~~~~ 353 (415)
.++.... .+..+.+.+.++..+|++...+++++.++.++++++++.+.|++++++. ...|.+++|+|++++
T Consensus 234 ~l~~~~~-~~~v~~~~~~~a~~~L~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~-~~~ps~~nfi~~~~~------- 304 (351)
T PRK01688 234 LLLKVIA-PYPLSTPVADIAAQALSPQGIAAMRERVAEINANRQWLIAALKEIPCVE-QVFDSETNYILARFT------- 304 (351)
T ss_pred HHHhccC-CCCCCHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHhCCCCC-eECCCCCcEEEEEcC-------
Confidence 8876643 3556777788888888754346788888999999999999999887765 236888999999875
Q ss_pred CCHHHHHHHHHhhcCeEEEcCCCC-CCCCeEEEEeeCChhhHHHHHHHH
Q 014936 354 IDDIDFCFKLAKEESVIILPGTAV-GLKNWLRVTFAVDPYSLEECLDRI 401 (415)
Q Consensus 354 ~~~~~~~~~ll~~~gi~v~~g~~~-~~~~~iRi~~~~~~~~l~~~l~~l 401 (415)
+..++...++ ++||.++++..+ +.++++||+++. .++++.+++.|
T Consensus 305 -~~~~l~~~L~-~~gi~vr~~~~~~~~~~~iRis~~~-~~e~~~l~~al 350 (351)
T PRK01688 305 -ASSAVFKSLW-DQGIILRDQNKQPGLSNCLRITIGT-REECQRVIDAL 350 (351)
T ss_pred -CHHHHHHHHH-HCCeEEEECCCcCCCCCeEEEeCCC-HHHHHHHHHhh
Confidence 3566777765 679999977654 557899999984 57888888776
No 93
>TIGR01141 hisC histidinol-phosphate aminotransferase. Histidinol-phosphate aminotransferase is a pyridoxal-phosphate dependent enzyme.
Probab=100.00 E-value=1.7e-42 Score=323.35 Aligned_cols=327 Identities=24% Similarity=0.395 Sum_probs=270.7
Q ss_pred CcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHH
Q 014936 34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAI 113 (415)
Q Consensus 34 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al 113 (415)
+.++|||++|++. +++++.+.+++.++.. ....|+++.+ +++|+.+|+++ ++++++|++++|+++++
T Consensus 18 ~~~~i~l~~~~~~----~~~~~~~~~a~~~~~~--~~~~y~~~~~-~~lr~~ia~~~------~~~~~~i~~~~G~~~~l 84 (346)
T TIGR01141 18 GKEVIKLNSNENP----FGPPPKAKEALRAEAD--KLHRYPDPDP-AELKQALADYY------GVDPEQILLGNGSDEII 84 (346)
T ss_pred CCceEEccCCCCC----CCCCHHHHHHHHHhHH--HhhcCCCCCH-HHHHHHHHHHh------CcChHHEEEcCCHHHHH
Confidence 4679999999964 6778899999998764 2357887665 89999999998 46789999999999999
Q ss_pred HHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHH
Q 014936 114 DVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQ 193 (415)
Q Consensus 114 ~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~ 193 (415)
..++.++.++||+|++++|+|+.+...++..|.++..++.+.+ +.+|++++++.++++++++++++|+||||.+++.+
T Consensus 85 ~~~~~~l~~~gd~v~~~~p~y~~~~~~~~~~g~~~~~~~~~~~--~~~d~~~l~~~~~~~~~~v~l~~p~NptG~~~~~~ 162 (346)
T TIGR01141 85 ELLIRAFLEPGDAVLVPPPTYSMYEISAKIHGAEVVKVPLDED--GQLDLEDILVAIDDKPKLVFLCSPNNPTGNLLSRS 162 (346)
T ss_pred HHHHHHhcCCCCEEEEcCCCHHHHHHHHHHcCCeEEEeccCCC--CCCCHHHHHHhcCCCCCEEEEeCCCCCCCCCCCHH
Confidence 9999999999999999999999888888999999999987543 56899999998888899999999999999999999
Q ss_pred HHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHH
Q 014936 194 HLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVE 273 (415)
Q Consensus 194 ~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~ 273 (415)
++.++++.|+ +|+++|+|++|..+...+. ..+ .....+++++++|+||.|+++|+|+||+++++ ++.+
T Consensus 163 ~~~~l~~~~~-~~~~ii~D~~y~~~~~~~~-~~~--~~~~~~~~i~~~S~sK~~g~~G~r~G~~~~~~--------~~~~ 230 (346)
T TIGR01141 163 DIEAVLERTP-EDALVVVDEAYGEFSGEPS-TLP--LLAEYPNLIVLRTLSKAFGLAGLRIGYAIANA--------EIID 230 (346)
T ss_pred HHHHHHHhCC-CCcEEEEECchhhhcCCcc-HHH--HHhhCCCEEEEehhhHhhhchhhhceeeecCH--------HHHH
Confidence 9999999987 7999999999997664321 111 12223468999999999999999999999864 6777
Q ss_pred HHHhhccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCccccCCC
Q 014936 274 RMKKYFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLDDI 353 (415)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~~~~ 353 (415)
.++.... .++.++++|.++..+++.. .++++.+++++++++.+.+.|++++++. + .|.+|+|+|+.++.
T Consensus 231 ~~~~~~~-~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~l~~~L~~~~g~~-~-~~~~g~~~~~~~~~------ 299 (346)
T TIGR01141 231 ALNKVRA-PFNLSRLAQAAAIAALRDD--DFIEKTVEEINAERERLYDGLKKLPGLE-V-YPSDANFVLIRFPR------ 299 (346)
T ss_pred HHHhccC-CCCCCHHHHHHHHHHhCCH--HHHHHHHHHHHHHHHHHHHHHHhcCCCE-E-CCCcCCEEEEecCC------
Confidence 7766543 3566788999998888753 4688889999999999999999887877 4 56678899998863
Q ss_pred CCHHHHHHHHHhhcCeEEEcCCCCCC-CCeEEEEeeCChhhHHHHHHHH
Q 014936 354 IDDIDFCFKLAKEESVIILPGTAVGL-KNWLRVTFAVDPYSLEECLDRI 401 (415)
Q Consensus 354 ~~~~~~~~~ll~~~gi~v~~g~~~~~-~~~iRi~~~~~~~~l~~~l~~l 401 (415)
+..++...+ .++||.+.||..|+. ++++|++++ ++++++++++.|
T Consensus 300 -~~~~~~~~L-~~~gI~v~~g~~f~~~~~~iRls~~-~~~~i~~~~~~l 345 (346)
T TIGR01141 300 -DADALFEAL-LEKGIIVRDLNSYPGLPNCLRITVG-TREENDRFLAAL 345 (346)
T ss_pred -CHHHHHHHH-HHCCeEEEeCCCcCCCCCeEEEecC-CHHHHHHHHHHh
Confidence 356676666 467999999988743 789999987 678888888776
No 94
>PRK07908 hypothetical protein; Provisional
Probab=100.00 E-value=1.4e-41 Score=316.96 Aligned_cols=324 Identities=17% Similarity=0.214 Sum_probs=258.0
Q ss_pred CcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHH
Q 014936 34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAI 113 (415)
Q Consensus 34 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al 113 (415)
+++++||+.|.+. +++++.+++++.+.+.. ...|+++.|..++|+++++++ ++++++|++|+|+++++
T Consensus 21 ~~~~~~l~~~~~~----~~~~~~~~~~~~~~~~~--~~~Y~~~~g~~~lr~aia~~~------~~~~~~I~it~Ga~~al 88 (349)
T PRK07908 21 GPGLLDFAVNVRH----DTPPEWLRERLAARLGD--LAAYPSTEDERRARAAVAARH------GRTPDEVLLLAGAAEGF 88 (349)
T ss_pred CCCeEEecCCCCC----CCCCHHHHHHHHHHhhH--hhcCCCccchHHHHHHHHHHh------CcChhhEEECCCHHHHH
Confidence 6789999999864 66788899999988753 457998889999999999998 57899999999999999
Q ss_pred HHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHH
Q 014936 114 DVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQ 193 (415)
Q Consensus 114 ~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~ 193 (415)
.+++. + ++ +.++++.|+|..+...++..|.++..++.+. ++.+|++.+ ++++++++++|||||||.++|.+
T Consensus 89 ~~~~~-l-~~-~~viv~~P~y~~~~~~~~~~G~~i~~v~~~~--~~~~d~~~l----~~~~~~i~l~np~NPTG~~~~~~ 159 (349)
T PRK07908 89 ALLAR-L-RP-RRAAVVHPSFTEPEAALRAAGIPVHRVVLDP--PFRLDPAAV----PDDADLVVIGNPTNPTSVLHPAE 159 (349)
T ss_pred HHHHh-c-CC-CeEEEeCCCChHHHHHHHHcCCEEEeeccCc--ccCcChhHh----ccCCCEEEEcCCCCCCCCCcCHH
Confidence 99988 4 56 4677789999999999999999999998754 267888755 34678999999999999999987
Q ss_pred HHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHH
Q 014936 194 HLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVE 273 (415)
Q Consensus 194 ~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~ 273 (415)
++.++ |+ ++.++|+||+|.++.. +. ..++...+ .+++++++||||.|+++|+|+||++++. ++++
T Consensus 160 ~l~~l---~~-~~~~iIvDe~y~~~~~-~~-~~~l~~~~-~~~~i~i~S~SK~~~l~GlRiG~~~~~~--------~~~~ 224 (349)
T PRK07908 160 QLLAL---RR-PGRILVVDEAFADAVP-GE-PESLAGDD-LPGVLVLRSLTKTWSLAGLRVGYALGAP--------DVLA 224 (349)
T ss_pred HHHHH---Hh-cCCEEEEECcchhhcc-CC-cccccccc-CCCEEEEeecccccCCccceeeeeecCH--------HHHH
Confidence 66555 54 4788999999998753 22 33443332 3479999999999999999999999864 6777
Q ss_pred HHHhhccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCccccCCC
Q 014936 274 RMKKYFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLDDI 353 (415)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~~~~ 353 (415)
.+..... .+..++..+.++..+++.....++++.+++++++++.+.+.|+++ ++. +..|.+|+|+|++++.
T Consensus 225 ~~~~~~~-~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~-~~~-~~~p~~g~~~~~~~~~------ 295 (349)
T PRK07908 225 RLTRGRA-HWPVGTLQLEAIAACCAPRAVAEAAADAARLAADRAEMVAGLRAV-GAR-VVDPAAAPFVLVRVPD------ 295 (349)
T ss_pred HHHhcCC-CCCccHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHhC-CcE-eccCCCceEEEEECCc------
Confidence 7776543 245667778888777764445778889999999999999999988 777 5477899999998862
Q ss_pred CCHHHHHHHHHhhcCeEEEcCCCCCC--CCeEEEEeeCChhhHHHHHHHHHHHHH
Q 014936 354 IDDIDFCFKLAKEESVIILPGTAVGL--KNWLRVTFAVDPYSLEECLDRIKSFYQ 406 (415)
Q Consensus 354 ~~~~~~~~~ll~~~gi~v~~g~~~~~--~~~iRi~~~~~~~~l~~~l~~l~~~~~ 406 (415)
.. .+...++++||.+.||..|+. +++|||+++ ++++++.+++.|++++.
T Consensus 296 --~~-~~~~~l~~~gI~v~~g~~f~~~~~~~vRis~~-~~~~~~~l~~al~~~~~ 346 (349)
T PRK07908 296 --AE-LLRKRLRERGIAVRRGDTFPGLDPDYLRLAVR-PRAEVPVLVQALAEILK 346 (349)
T ss_pred --HH-HHHHHHHhCCEEEEECCCCCCCCCCeEEEEeC-CCccHHHHHHHHHHHHh
Confidence 33 445556788999999998853 689999995 45677777777776643
No 95
>PRK03321 putative aminotransferase; Provisional
Probab=100.00 E-value=1.6e-41 Score=317.17 Aligned_cols=329 Identities=22% Similarity=0.298 Sum_probs=266.3
Q ss_pred cceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHH
Q 014936 35 KKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAID 114 (415)
Q Consensus 35 ~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~ 114 (415)
..+++|+.|.+. +++++.+++++.+.+. ....|++ .|..++|+.+|+++ ++++++|++++|+++++.
T Consensus 22 ~~~i~l~~~~~~----~~~~~~~~~a~~~~~~--~~~~y~~-~g~~~lr~~ia~~~------~~~~~~I~~~~G~~~~l~ 88 (352)
T PRK03321 22 PGAIKLSSNETP----FGPLPSVRAAIARAAA--GVNRYPD-MGAVELRAALAEHL------GVPPEHVAVGCGSVALCQ 88 (352)
T ss_pred ccceeccCCCCC----CCCCHHHHHHHHHHHH--hcCcCCC-CcHHHHHHHHHHHh------CcCHHHEEECCCHHHHHH
Confidence 468999999865 6667889999988775 3456865 69999999999998 467889999999999999
Q ss_pred HHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHH
Q 014936 115 VAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQH 194 (415)
Q Consensus 115 ~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~ 194 (415)
.++..+.++||+|+++.|+|..+...++..|.+++.++.+++ +.+|++.+++.++++++++++++|+||||.+++.++
T Consensus 89 ~~~~~~~~~gd~Vli~~p~y~~~~~~~~~~g~~~~~v~~~~~--~~~~~~~l~~~~~~~~~~v~l~~p~NPtG~~~~~~~ 166 (352)
T PRK03321 89 QLVQATAGPGDEVIFAWRSFEAYPILVQVAGATPVQVPLTPD--HTHDLDAMAAAITDRTRLIFVCNPNNPTGTVVTPAE 166 (352)
T ss_pred HHHHHhcCCCCEEEeCCCCHHHHHHHHHHcCCEEEEccCCCC--CCCCHHHHHHhhccCCCEEEEeCCCCCcCCCcCHHH
Confidence 999999999999999999999888888999999999987543 568999999999888999999999999999999999
Q ss_pred HHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHHH
Q 014936 195 LQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVER 274 (415)
Q Consensus 195 l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~ 274 (415)
+.++++.| ++++++|+||+|.++.+++....++..+...+++++++||||.|+++|+|+||+++++ ++++.
T Consensus 167 l~~l~~~~-~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~~v~~~--------~~~~~ 237 (352)
T PRK03321 167 LARFLDAV-PADVLVVLDEAYVEYVRDDDVPDGLELVRDHPNVVVLRTFSKAYGLAGLRVGYAVGHP--------EVIAA 237 (352)
T ss_pred HHHHHHhC-CCCeEEEEechHHHhccCcCCCcHHHHHhhCCCEEEEecchHHhhhHHHhhhhhcCCH--------HHHHH
Confidence 99999876 4699999999999988765433334444555789999999999999999999999864 67888
Q ss_pred HHhhccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCccccCCCC
Q 014936 275 MKKYFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLDDII 354 (415)
Q Consensus 275 ~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~~~~~ 354 (415)
+.... ...+.+.++|.++..+|.. .+.+.+..+.+.++++.+.+.|++. ++. + .+.+|+|+|++++.
T Consensus 238 ~~~~~-~~~~~s~~~q~~a~~~l~~--~~~~~~~~~~~~~~r~~~~~~L~~~-~~~-~-~~~~g~~i~i~l~~------- 304 (352)
T PRK03321 238 LRKVA-VPFSVNSLAQAAAIASLAA--EDELLERVDAVVAERDRVRAALRAA-GWT-V-PPSQANFVWLPLGE------- 304 (352)
T ss_pred HHHhc-CCCCCCHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHHHHHC-CCc-c-CCCCCCEEEEeCCC-------
Confidence 77653 2467788999888888864 2334455555666778888999887 666 4 45678999998852
Q ss_pred CHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEeeCChhhHHHHHHHHHHHHH
Q 014936 355 DDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFAVDPYSLEECLDRIKSFYQ 406 (415)
Q Consensus 355 ~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~~~l~~~l~~l~~~~~ 406 (415)
+..++...+ +++||.+.+ |+ ..+|||+++ +.++.+.++++|.+++.
T Consensus 305 ~~~~~~~~l-~~~gI~v~~---~~-~~~iRi~~~-~~~~~~~~~~al~~~~~ 350 (352)
T PRK03321 305 RTADFAAAA-AEAGVVVRP---FA-GEGVRVTIG-APEENDAFLRAARAWRA 350 (352)
T ss_pred CHHHHHHHH-HHCCEEEEc---cC-CCcEEEeeC-CHHHHHHHHHHHHHHhc
Confidence 456677665 678999987 33 357999984 56777888888877643
No 96
>PRK04635 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=1.5e-41 Score=317.02 Aligned_cols=320 Identities=18% Similarity=0.270 Sum_probs=252.8
Q ss_pred cceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHH
Q 014936 35 KKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAID 114 (415)
Q Consensus 35 ~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~ 114 (415)
...++|+.|.+. +++++.+ .. ..+..|+++ +.++||+++|+++ ++++++|++|+|+++++.
T Consensus 31 ~~~~~l~~ne~~----~~~~~~~------~~--~~~~~Yp~~-~~~~Lr~aia~~~------~~~~~~I~it~Gs~~~i~ 91 (354)
T PRK04635 31 RGDIWINANESP----FNNEYKL------DL--ARLNRYPEC-QPPELINAYSAYA------GVAPEQILTSRGADEAIE 91 (354)
T ss_pred CCcEEeeCCCCC----CCCChhh------hh--HHhccCCCC-CHHHHHHHHHHHh------CcCHHHEEEeCCHHHHHH
Confidence 456999999864 4444432 11 134679886 5799999999998 689999999999999999
Q ss_pred HHHHHhcCCC-CEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHH
Q 014936 115 VAMALLSRPG-ANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQ 193 (415)
Q Consensus 115 ~~~~~l~~~g-d~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~ 193 (415)
.++.+++++| |+|+++.|+|..|...++..|++++.++.+. ++.+|++.++. + ++++++++++||||||.+++.+
T Consensus 92 ~~~~~~~~~g~d~vlv~~P~y~~y~~~~~~~g~~v~~v~~~~--~~~~~~~~l~~-~-~~~~li~i~nP~NPTG~~~~~~ 167 (354)
T PRK04635 92 LLIRAFCEPGQDSIACFGPTYGMYAISAETFNVGVKALPLTA--DYQLPLDYIEQ-L-DGAKLVFICNPNNPTGTVIDRA 167 (354)
T ss_pred HHHHHhcCCCCCeEEEcCCChHHHHHHHHHcCCEEEEEecCC--CCCCCHHHHHh-c-cCCCEEEEeCCCCCCCccCCHH
Confidence 9999999998 8999999999999999999999999998753 46789988874 4 5789999999999999999999
Q ss_pred HHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHH
Q 014936 194 HLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVE 273 (415)
Q Consensus 194 ~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~ 273 (415)
++++|+++|+ ++++|+||+|..+.... .... .....+++++++||||+|+++|+|+||+++++ ++++
T Consensus 168 ~l~~l~~~~~--~~~vivDeay~~~~~~~-s~~~--~~~~~~~~iv~~S~SK~~~l~GlRlG~~i~~~--------~~~~ 234 (354)
T PRK04635 168 DIEQLIEMTP--DAIVVVDEAYIEFCPEY-SVAD--LLASYPNLVVLRTLSKAFALAGARCGFTLANE--------ELIE 234 (354)
T ss_pred HHHHHHHhCC--CcEEEEeCchHhhccCc-chHH--HHhhCCCEEEEechHHHhhhhHHHHhhhhCCH--------HHHH
Confidence 9999999887 49999999999876321 1111 12334678999999999999999999999865 6777
Q ss_pred HHHhhccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCccccCCC
Q 014936 274 RMKKYFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLDDI 353 (415)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~~~~ 353 (415)
.+..... .++.+...|.++.++|.+...+++++..+.++++++.+.+.|++++++. + .|..|.|+|++++
T Consensus 235 ~l~~~~~-~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~-~-~~~~g~f~~~~~~------- 304 (354)
T PRK04635 235 ILMRVIA-PYPVPLPVSEIATQALSEAGLARMKFQVLDLNAQGARLQAALSMYGGAK-V-LEGNGNYVLAKFD------- 304 (354)
T ss_pred HHHhhcC-CCCCCHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHhCCCce-E-CCCCCcEEEEECC-------
Confidence 7765433 3556777888888888754445677888889999999999999986566 4 3456789998875
Q ss_pred CCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEeeCChhhHHHHHHHHHH
Q 014936 354 IDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFAVDPYSLEECLDRIKS 403 (415)
Q Consensus 354 ~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~~~l~~~l~~l~~ 403 (415)
+..++.. ++.++||.+.++..++.++++|||++ +.++++.+++.|++
T Consensus 305 -~~~~~~~-~l~~~gv~v~~~~~~~~~~~lRis~~-~~e~~~~l~~al~~ 351 (354)
T PRK04635 305 -DVDAVFK-ALWDAGIVARAYKDPRLANCIRFSFS-NRAETDKLIGLIRN 351 (354)
T ss_pred -CHHHHHH-HHHHCCEEEEECCCCCCCCeEEEEeC-CHHHHHHHHHHHHH
Confidence 2445544 55778999987655555789999996 46778888877754
No 97
>PRK06425 histidinol-phosphate aminotransferase; Validated
Probab=100.00 E-value=5.2e-41 Score=310.39 Aligned_cols=313 Identities=17% Similarity=0.201 Sum_probs=241.4
Q ss_pred ceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHH
Q 014936 36 KVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDV 115 (415)
Q Consensus 36 ~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~ 115 (415)
.+++|+.+.+. ++ ....+..|+++ ...+||+++|+++ ++++++|++|+|+++++..
T Consensus 17 ~~i~l~~Nenp----~~-------------~~~~~~~Yp~~-~~~~lr~~ia~~~------~~~~~~I~it~Gs~~~l~~ 72 (332)
T PRK06425 17 RIIDFSANIND----FM-------------DIGDISIYPEI-SYTDIEDQIKIYT------QGLKIKVLIGPGLTHFIYR 72 (332)
T ss_pred CEEEeccccCC----Cc-------------ChhhcccCcCc-CHHHHHHHHHHHh------CCCcceEEECCCHHHHHHH
Confidence 57999999843 21 00134578875 4789999999998 6789999999999999999
Q ss_pred HHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHH
Q 014936 116 AMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHL 195 (415)
Q Consensus 116 ~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l 195 (415)
++.. .++| .|++++|+|+.|...++..|+++..+|.+. +..|.+.+++ .+++++++++||||||.+++.+++
T Consensus 73 ~~~~-~~~~-~vv~~~P~y~~y~~~~~~~G~~v~~vp~~~---~~~~~~~l~~---~~~k~v~l~nP~NPTG~~~s~~~~ 144 (332)
T PRK06425 73 LLSY-INVG-NIIIVEPNFNEYKGYAFTHGIRISALPFNL---INNNPEILNN---YNFDLIFIVSPDNPLGNLISRDSL 144 (332)
T ss_pred HHHH-hCCC-cEEEeCCChHHHHHHHHHcCCeEEEEeCCc---ccCcHHHHhh---cCCCEEEEeCCCCCcCCccCHHHH
Confidence 9974 5776 577779999999999999999999999753 3456666553 377899999999999999999999
Q ss_pred HHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHHHH
Q 014936 196 QKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERM 275 (415)
Q Consensus 196 ~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~ 275 (415)
++|+++|+++++++|+||+|.++.+++. ..........+++|+++||||.|+++|+|+||+++++ ++++.+
T Consensus 145 ~~l~~~a~~~~~~iI~DE~Y~~~~~~~~-~~~~~~~~~~~~vi~~~SfSK~~~l~GlRiGy~v~~~--------~li~~l 215 (332)
T PRK06425 145 LTISEICRKKGALLFIDEAFIDFVPNRA-EEDVLLNRSYGNVIIGRSLTKILGIPSLRIGYIATDD--------YNMKIS 215 (332)
T ss_pred HHHHHHHHHcCCEEEEecchhccccccc-hhHHHHhccCCCEEEEeecHHhcCCchhhheeeecCH--------HHHHHH
Confidence 9999999999999999999999886532 1112222334689999999999999999999999965 678877
Q ss_pred HhhccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCccccCCCCC
Q 014936 276 KKYFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLDDIID 355 (415)
Q Consensus 276 ~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~~~~~~ 355 (415)
..... .+..+...+.++.. . ..+.++++.++.++++++.+.+.|+++ ++. +..|.+|+|+|++++ +
T Consensus 216 ~~~~~-~~~~~~~~~~~l~~-~--~~~~~~~~~~~~~~~~r~~l~~~L~~~-g~~-~~~~~~g~f~~~~~~--------~ 281 (332)
T PRK06425 216 RKITE-PWSVCDPAIDFIRS-I--DLDYVAKHSLDIMENERSYLINNLEAM-GFR-AAGDPSANFITFMIP--------D 281 (332)
T ss_pred HHcCC-CCccCHHHHHHHHH-h--hhHHHHHHHHHHHHHHHHHHHHHHHHC-CCE-ECCCCCceEEEEEcC--------C
Confidence 76533 23333333332221 1 113566788899999999999999988 676 334567889999875 3
Q ss_pred HHHHHHHHHhhcCeEEEcCCCCCC--CCeEEEEeeCChhhHHHHHHHHHHHH
Q 014936 356 DIDFCFKLAKEESVIILPGTAVGL--KNWLRVTFAVDPYSLEECLDRIKSFY 405 (415)
Q Consensus 356 ~~~~~~~ll~~~gi~v~~g~~~~~--~~~iRi~~~~~~~~l~~~l~~l~~~~ 405 (415)
+.++...++ ++||.+.||..|+. ++++||+++.+ ++.+.+++.|++++
T Consensus 282 ~~~~~~~l~-~~gi~v~~~~~f~~~~~~~iRis~~~~-~~~~~l~~al~~~~ 331 (332)
T PRK06425 282 AHDFYSYLL-KNGILVRLLDDYECLGEQYIRIAIRRR-SFNIKLVNALRNFL 331 (332)
T ss_pred HHHHHHHHH-HCCeEEEECCCCCCCCCCEEEEEeCCH-HHHHHHHHHHHHHh
Confidence 567777775 46999999998853 47999999754 56788888877653
No 98
>PRK00950 histidinol-phosphate aminotransferase; Validated
Probab=100.00 E-value=6.2e-41 Score=314.65 Aligned_cols=325 Identities=21% Similarity=0.354 Sum_probs=261.5
Q ss_pred CcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEE-eCChHHH
Q 014936 34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFV-TSGCTQA 112 (415)
Q Consensus 34 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i-~~g~~~a 112 (415)
+.++++|+.|++. +++++.+++++.+.+.. ...|+++. .+++|+++|+++ +++++++++ ++|++++
T Consensus 33 ~~~~i~l~~~~~~----~~~~~~~~~~~~~~~~~--~~~y~~~~-~~~lr~~ia~~~------~~~~~~i~~~~~Ga~~~ 99 (361)
T PRK00950 33 PESIIKLGSNENP----LGPSPKAVEAIEKELSK--IHRYPEPD-APELREALSKYT------GVPVENIIVGGDGMDEV 99 (361)
T ss_pred ccceEEccCCCCC----CCCCHHHHHHHHHHHHh--hcCCCCCC-HHHHHHHHHHHh------CCCHHHEEEeCCCHHHH
Confidence 4588999999854 66788899998887663 35788754 499999999998 568899999 7899999
Q ss_pred HHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCH
Q 014936 113 IDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSY 192 (415)
Q Consensus 113 l~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~ 192 (415)
+..+++++.++||+|+++.|+|..+...++..|++++.++. ++++.+|++.+++.++++++++++++|+||||.+++.
T Consensus 100 i~~~~~~~~~~gd~vlv~~p~y~~~~~~~~~~g~~~~~~~~--~~~~~~~~~~l~~~~~~~~~~v~~~~p~nptG~~~~~ 177 (361)
T PRK00950 100 IDTLMRTFIDPGDEVIIPTPTFSYYEISAKAHGAKPVYAKR--EEDFSLDVDSVLNAITEKTKVIFLCTPNNPTGNLIPE 177 (361)
T ss_pred HHHHHHHhcCCCCEEEEcCCChHHHHHHHHHcCCEEEEeec--CCCCCcCHHHHHHHhccCCCEEEEeCCCCCCCCCcCH
Confidence 99999999999999999999999998889999999998874 3456799999999988788999999999999999998
Q ss_pred HHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHH
Q 014936 193 QHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVV 272 (415)
Q Consensus 193 ~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~ 272 (415)
+++.++++ ++|+++|+||+|.++. +....++ ....+++++++||||.|+++|+|+||+++++ +++
T Consensus 178 ~~l~~l~~---~~~~~li~De~y~~~~--~~~~~~~--~~~~~~vi~~~S~SK~~g~~GlRiG~~~~~~--------~~~ 242 (361)
T PRK00950 178 EDIRKILE---STDALVFVDEAYVEFA--EYDYTPL--ALEYDNLIIGRTFSKVFGLAGLRIGYGFVPE--------WLI 242 (361)
T ss_pred HHHHHHHH---HCCcEEEEECchhhhC--ccchHHH--HHhcCCEEEEEeehHhhcCchhhcchhcCCH--------HHH
Confidence 87776654 6799999999998865 2222221 2233578999999999999999999999865 677
Q ss_pred HHHHhhccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCccccCC
Q 014936 273 ERMKKYFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLDD 352 (415)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~~~ 352 (415)
+.++.... ....+++.|.++..+++. .+++++..++++++++.+.+.|+ +. + .|.+++|+|++++.
T Consensus 243 ~~~~~~~~-~~~~~~~~~~~a~~~l~~--~~~~~~~~~~~~~~r~~l~~~l~----~~-~-~~~~~~~i~~~~~~----- 308 (361)
T PRK00950 243 DYYMRAKT-PFSLTRLSQAAAIAALSD--KEYIEKSIEHGIKSREYLYNELP----FK-V-YPSEANFVLVDVTP----- 308 (361)
T ss_pred HHHHHhcC-CCCCCHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHhhcC----ee-E-CCCcceEEEEECCC-----
Confidence 77776543 245678888888888865 46788888888888888887775 34 3 56788999998842
Q ss_pred CCCHHHHHHHHHhhcCeEEEcCCCCCC--CCeEEEEeeCChhhHHHHHHHHHHHH
Q 014936 353 IIDDIDFCFKLAKEESVIILPGTAVGL--KNWLRVTFAVDPYSLEECLDRIKSFY 405 (415)
Q Consensus 353 ~~~~~~~~~~ll~~~gi~v~~g~~~~~--~~~iRi~~~~~~~~l~~~l~~l~~~~ 405 (415)
.+..++...++ ++||.+.||..|+. ++++|++++ +.++++++++.|++++
T Consensus 309 -~~~~~~~~~l~-~~gv~v~~~~~f~~~~~~~lRis~~-~~~~~~~l~~~L~~il 360 (361)
T PRK00950 309 -MTAKEFCEELL-KRGVIVRDCTSFRGLGDYYIRVSIG-TFEENERFLEILKEIV 360 (361)
T ss_pred -CCHHHHHHHHH-HCCEEEeeCCccCCCCCCeEEEECC-CHHHHHHHHHHHHHHh
Confidence 25677777775 56999999987754 579999998 4568899999888764
No 99
>PRK14808 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=8.1e-41 Score=308.85 Aligned_cols=317 Identities=16% Similarity=0.239 Sum_probs=249.8
Q ss_pred cCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHH
Q 014936 33 NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQA 112 (415)
Q Consensus 33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~a 112 (415)
.+.++++|+.|+|. +++++.+++++.+.+....+..|+++ +.++||+++++|+++.. +++++|++|+|++++
T Consensus 17 ~~~~~i~l~~~~~~----~~~p~~~~~~~~~~~~~~~~~~Y~~~-~~~~Lr~aia~~~~~~~---~~~~~i~it~Ga~~~ 88 (335)
T PRK14808 17 EKRDRTYLALNENP----FPFPEDLVDEVFRRLNSDTLRIYYDS-PDEELIEKILSYLDTDF---LSKNNVSVGNGADEI 88 (335)
T ss_pred CCCceeEecCCCCC----CCCCHHHHHHHHHHhhhhhhhcCCCC-ChHHHHHHHHHHhCCCC---CCcceEEEcCCHHHH
Confidence 46789999999965 78889999999887765445568765 89999999999996532 689999999999999
Q ss_pred HHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCH
Q 014936 113 IDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSY 192 (415)
Q Consensus 113 l~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~ 192 (415)
+..++.++ |.|++++|+|..+...++..|+++..++.+.+ +.++... + ..++++++++||||||.+++.
T Consensus 89 i~~~~~~~----d~v~v~~P~y~~~~~~~~~~g~~~~~v~~~~~--~~~~~~~----~-~~~~~i~i~nP~NPTG~~~s~ 157 (335)
T PRK14808 89 IYVMMLMF----DRSVFFPPTYSCYRIFAKAVGAKFLEVPLTKD--LRIPEVN----V-GEGDVVFIPNPNNPTGHVFER 157 (335)
T ss_pred HHHHHHHh----CcEEECCCCHHHHHHHHHHcCCeEEEecCCCc--CCCChhH----c-cCCCEEEEeCCCCCCCCCcCH
Confidence 99999887 67999999999999999999999999987542 3343222 2 246889999999999999999
Q ss_pred HHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHH
Q 014936 193 QHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVV 272 (415)
Q Consensus 193 ~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~ 272 (415)
+++++|+ ++++++|+||+|.++. +....+ .+...+++++++||||+|+++|+|+||+++++ +++
T Consensus 158 ~~l~~l~----~~~~~ii~DE~Y~~f~--~~~~~~--~~~~~~~vi~~~S~SK~~~l~GlRvG~~v~~~--------~~~ 221 (335)
T PRK14808 158 EEIERIL----KTGAFVALDEAYYEFH--GESYVD--LLKKYENLAVIRTFSKAFSLAAQRIGYVVSSE--------KFI 221 (335)
T ss_pred HHHHHHH----hcCCEEEEECchhhhc--CCchHH--HHHhCCCEEEEEechhhccCcccceEEEEeCH--------HHH
Confidence 9998887 4699999999999864 222212 12234589999999999999999999999965 688
Q ss_pred HHHHhhccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCccccCC
Q 014936 273 ERMKKYFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLDD 352 (415)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~~~ 352 (415)
+.+..... .++.+.++|.++..++++ .++.++..+.++++++.+.+.|+++ ++. + .+..|.|+|+.++.
T Consensus 222 ~~l~~~~~-~~~~~~~~q~a~~~~l~~--~~~~~~~~~~~~~~r~~l~~~L~~~-g~~-~-~~~~g~f~~~~l~~----- 290 (335)
T PRK14808 222 DAYNRVRL-PFNVSYVSQMFAKVALDH--REIFEERTKFIVEERERMKSALREM-GYR-I-TDSRGNFVFIFMEK----- 290 (335)
T ss_pred HHHHHhcC-CCCCCHHHHHHHHHHHhC--HHHHHHHHHHHHHHHHHHHHHHHHC-CCE-E-CCCCCeEEEEeCCC-----
Confidence 88876553 356778889998888864 3567777888888899999999988 676 4 34467899998863
Q ss_pred CCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEeeCChhhHHHHHHHHHH
Q 014936 353 IIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFAVDPYSLEECLDRIKS 403 (415)
Q Consensus 353 ~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~~~l~~~l~~l~~ 403 (415)
.+..++.. .+.++||.|.. | .+++||+++.. ++.+.+++.|++
T Consensus 291 -~~~~~~~~-~l~~~Gi~V~~---~--~~~~Risi~~~-~~~~~~~~~l~~ 333 (335)
T PRK14808 291 -EEKERLLE-HLRAKNIAVRS---F--REGVRITIGKR-EENDMILKELEV 333 (335)
T ss_pred -ccHHHHHH-HHHHCCeEEEE---C--CCCeEEecCCH-HHHHHHHHHHHh
Confidence 13445555 45678999985 2 37899998654 666777777764
No 100
>PRK03967 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=4.7e-40 Score=304.43 Aligned_cols=316 Identities=21% Similarity=0.316 Sum_probs=247.3
Q ss_pred CcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHH
Q 014936 34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAI 113 (415)
Q Consensus 34 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al 113 (415)
+...++|+.|.+. +++++.+.+++.+.+.......|++ .|.+++|+++++++ ++++++|++|+|+++++
T Consensus 17 ~~~~i~l~~~~~~----~~~~~~~~~~~~~~~~~~~~~~Y~~-~g~~~lr~~ia~~~------~~~~~~I~~t~G~~~~l 85 (337)
T PRK03967 17 GNYRIWLDKNENP----FDLPEELKEEIFEELKRVPFNRYPH-ITSDPLREAIAEFY------GLDAENIAVGNGSDELI 85 (337)
T ss_pred CCceEEecCCCCC----CCCCHHHHHHHHHHhhcCccccCCC-CCHHHHHHHHHHHh------CcCcceEEEcCCHHHHH
Confidence 3467999999864 6778889999988876544568875 68999999999999 47899999999999999
Q ss_pred HHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHH
Q 014936 114 DVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQ 193 (415)
Q Consensus 114 ~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~ 193 (415)
..++..+ +||+|+++.|+|..+...++..|.+++.++.+ .++.+|++.+++.. ++++++++++|+||||.+++.+
T Consensus 86 ~~~~~~~--~gd~V~v~~P~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~~-~~~~~v~~~~P~NPtG~~~~~~ 160 (337)
T PRK03967 86 SYLVKLF--EGKHIVITPPTFGMYSFYAKLNGIPVIDVPLK--EDFTIDGERIAEKA-KNASAVFICSPNNPTGNLQPEE 160 (337)
T ss_pred HHHHHHh--CCCeEEEeCCChHHHHHHHHHcCCeEEEeecC--CCCCcCHHHHHHhc-cCCCEEEEeCCCCCCCCCCCHH
Confidence 9888776 79999999999999888889999999999875 34679999998865 4678889999999999999988
Q ss_pred HHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHH
Q 014936 194 HLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVE 273 (415)
Q Consensus 194 ~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~ 273 (415)
++.+++ ++++++|+||+|.++.. ....+ .....+++++++||||.|+++|+|+||+++++ ++++
T Consensus 161 ~l~~i~----~~~~~ii~De~y~~~~~--~~~~~--~~~~~~~vi~l~S~SK~~~l~GlRiG~iv~~~--------~~i~ 224 (337)
T PRK03967 161 EILKVL----ETGKPVVLDEAYAEFSG--KSLIG--LIDEYPNLILLRTFSKAFGLAGIRAGYAIANE--------EIID 224 (337)
T ss_pred HHHHHH----hcCCEEEEECchhhhcc--cchHH--HHhhCCCEEEEecchHhhcchhhhheeeecCH--------HHHH
Confidence 777765 36999999999998652 22211 12334679999999999999999999999865 6788
Q ss_pred HHHhhccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCccccCCC
Q 014936 274 RMKKYFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLDDI 353 (415)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~~~~ 353 (415)
.+..... .++.+.++|.++..+|++ .+++.+..+.+.++++.+.+.|.+. . .|.+++|+|++++
T Consensus 225 ~~~~~~~-~~~~~~~~q~~~~~~l~~--~~~~~~~~~~~~~~r~~l~~~L~~~-----~-~~~~~~~~~~~~~------- 288 (337)
T PRK03967 225 ALYRIKP-PFSLNILTMKIVRLALDH--YDLIEERIDYIIKERERVRRELGEY-----A-YPSDANFLLLKLD------- 288 (337)
T ss_pred HHHhhcC-CCCCCHHHHHHHHHHHhC--HHHHHHHHHHHHHHHHHHHHHhccC-----c-CCCCCcEEEEhHH-------
Confidence 8877654 356788999999999974 3566666677778888888888654 2 5788999997652
Q ss_pred CCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEeeCChhhHHHHHHHHHHHH
Q 014936 354 IDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFAVDPYSLEECLDRIKSFY 405 (415)
Q Consensus 354 ~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~~~l~~~l~~l~~~~ 405 (415)
+...++ ++||.+.++.. ...+++||+++.. ++.+++++.|..+.
T Consensus 289 -----~~~~l~-~~gi~v~~~~~-~~~~~~Ri~~~~~-~~~~~l~~~l~~~~ 332 (337)
T PRK03967 289 -----AYDYLL-ENGIVVRKLSG-RLEGHIRVTVGKR-EENDEFIKALKEIK 332 (337)
T ss_pred -----HHHHHH-HCCEEEEeCCC-CCCCeEEEecCCH-HHHHHHHHHHHHHH
Confidence 345554 56999987653 2357999999752 33345555554443
No 101
>PRK06959 putative threonine-phosphate decarboxylase; Provisional
Probab=100.00 E-value=2.3e-40 Score=306.13 Aligned_cols=310 Identities=13% Similarity=0.123 Sum_probs=242.7
Q ss_pred cceeEecccCCCCCCCCCCc-HHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCC-CCcEEEeCChHHH
Q 014936 35 KKVISLAMGDPTVHSCFHTT-HVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLT-PNDVFVTSGCTQA 112 (415)
Q Consensus 35 ~~~i~l~~g~~~~~~~~~~~-~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~-~~~i~i~~g~~~a 112 (415)
..+++|+.+.+. ++++ +.+ .+ . .+..|+++ . .+||+++|+++ ++. +++|++|+|++++
T Consensus 24 ~~~i~ls~Nenp----~~~~~~~~-~~--~-----~~~~Yp~~-~-~~L~~~ia~~~------~~~~~~~I~i~~Gs~e~ 83 (339)
T PRK06959 24 DAWLDLSTGINP----HGYPVPPV-PA--D-----AWRRLPED-D-DGLAACAARYY------GAPDAAHVLPVAGSQAA 83 (339)
T ss_pred hhhceeccCCCC----CCCCCCCC-CH--H-----HHHhCCCc-h-HHHHHHHHHHh------CCCCcccEEECcCHHHH
Confidence 567999999854 3333 211 11 1 13468875 3 89999999998 454 5899999999999
Q ss_pred HHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCH
Q 014936 113 IDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSY 192 (415)
Q Consensus 113 l~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~ 192 (415)
+..+.. ++++|+ |+++.|+|+.|...++..|++++.++.+. +.+ .+..+.+++++||||||.+++.
T Consensus 84 i~~l~~-~~~~g~-v~v~~P~y~~y~~~~~~~g~~~~~v~~~~--------~~~----~~~~~~v~l~nPnNPTG~~~s~ 149 (339)
T PRK06959 84 IRALPA-LLPRGR-VGIAPLAYSEYAPAFARHGHRVVPLDEAA--------DTL----PAALTHLIVVNPNNPTAERLPA 149 (339)
T ss_pred HHHHHH-hcCCCe-EEEcCCCcHHHHHHHHHCCCEEEeecccc--------hhc----cccCCEEEEeCCCCCCCCCCCH
Confidence 997765 567776 88999999999999999999998876532 222 2234689999999999999999
Q ss_pred HHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHH
Q 014936 193 QHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVV 272 (415)
Q Consensus 193 ~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~ 272 (415)
++++++++.|.+++.++|+||+|.++... .++..+...+++++++||||.|+++|+|+||++++. +++
T Consensus 150 ~~l~~l~~~~~~~~~~vI~DEay~~~~~~----~s~~~~~~~~~vi~l~SfSK~~gl~GlRiGy~v~~~--------~li 217 (339)
T PRK06959 150 ARLLRWHAQLAARGGTLIVDEAFADTLPA----ASLAAHTDRPGLVVLRSVGKFFGLAGVRAGFVLAAP--------ALL 217 (339)
T ss_pred HHHHHHHHHHHHcCCEEEEECCCccCCCc----ccchhccCCCCEEEEecChhhcCCcchheEEEecCH--------HHH
Confidence 99999999999989999999999997632 233333234679999999999999999999999865 688
Q ss_pred HHHHhhccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCccccCC
Q 014936 273 ERMKKYFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLDD 352 (415)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~~~ 352 (415)
+.++.... .+..+.++|.++.++|++ ..+.++.++.++++++.+.+.|+++ ++. + . .+++|+|++++
T Consensus 218 ~~l~~~~~-~~~vs~~~q~a~~~~L~~--~~~~~~~~~~~~~~r~~l~~~L~~~-g~~-~-~-~~~~f~~~~~~------ 284 (339)
T PRK06959 218 AALRDALG-AWTVSGPARHAVRAAFAD--AAWQAAMRERLAADGARLAALLRAH-GFA-V-H-ATPLFSWTDDP------ 284 (339)
T ss_pred HHHHHhcC-CCCCcHHHHHHHHHHhCc--HHHHHHHHHHHHHHHHHHHHHHHHC-CCC-c-c-CcceEEEEeCC------
Confidence 88887654 456788899999999975 4678888999999999999999998 776 3 2 35789998774
Q ss_pred CCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEeeCChhhHHHHHHHHHHHHHHHH
Q 014936 353 IIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFAVDPYSLEECLDRIKSFYQRHA 409 (415)
Q Consensus 353 ~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~~~l~~~l~~l~~~~~~~~ 409 (415)
+..++...+ .++||.++. |+..+++||+++.+.++.+.+++.|+++++.+.
T Consensus 285 --~~~~l~~~l-~~~GI~vr~---~~~~~~lRisi~~~~~e~~~l~~al~~~~~~~~ 335 (339)
T PRK06959 285 --RAAALHAAL-ARRGIWTRY---FAPPPSVRFGLPADEAEWQRLEDALAECVPTLA 335 (339)
T ss_pred --CHHHHHHHH-HhCCeEEEE---CCCCCeEEEECCCCHHHHHHHHHHHHHHHHHHh
Confidence 345666665 567999974 344679999997677788899888887776654
No 102
>PRK05664 threonine-phosphate decarboxylase; Reviewed
Probab=100.00 E-value=9e-40 Score=301.67 Aligned_cols=307 Identities=14% Similarity=0.163 Sum_probs=236.4
Q ss_pred cceeEecccCCCCCCCCCCc-HHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHH
Q 014936 35 KKVISLAMGDPTVHSCFHTT-HVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAI 113 (415)
Q Consensus 35 ~~~i~l~~g~~~~~~~~~~~-~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al 113 (415)
..+++|+.|.+. ++++ +.+.+ .. ...|+.. ..+||++|++++ .+++|++|+|+++++
T Consensus 20 ~~~i~l~~ne~p----~~~~~~~~~~---~~-----~~~yp~~--~~~Lr~~ia~~~--------~~~~I~it~Gs~~al 77 (330)
T PRK05664 20 ADWLDLSTGIAP----WPWPVPAIPA---DA-----WARLPET--DDGLEAAARAYY--------GAPQLLPVAGSQAAI 77 (330)
T ss_pred HHheeecCCcCC----CCCCCcccCH---HH-----HHhCCCC--hHHHHHHHHHHh--------CCCCEEECcCHHHHH
Confidence 457999999632 2222 22211 11 2247653 389999999998 357999999999999
Q ss_pred HHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHH
Q 014936 114 DVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQ 193 (415)
Q Consensus 114 ~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~ 193 (415)
.+++. ..+||+|++++|+|+.+...++..|++++.++. +++++.++ +++++++++||||||.+++.+
T Consensus 78 ~~~~~--~~~gd~v~v~~P~y~~~~~~~~~~g~~~~~v~~----------~~~~~~~~-~~~~v~l~nP~NPTG~~~s~~ 144 (330)
T PRK05664 78 QALPR--LRAPGRVGVLSPCYAEHAHAWRRAGHQVRELDE----------AEVEAALD-SLDVLVVVNPNNPTGRRFDPA 144 (330)
T ss_pred HHHHH--ccCCCEEEEcCCChHHHHHHHHHcCCeEEEech----------hhHhhhhc-CCCEEEEeCCcCCCCCccCHH
Confidence 98863 479999999999999999999999999988864 23444443 577899999999999999999
Q ss_pred HHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHH
Q 014936 194 HLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVE 273 (415)
Q Consensus 194 ~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~ 273 (415)
++++|+++|+++++++|+||+|..+. ...++..+...+++++++||||.|+++|+|+||++++. ++++
T Consensus 145 ~l~~l~~~~~~~~~~iI~DE~y~~~~----~~~s~~~~~~~~~vi~~~SfSK~~gl~GlRiG~~v~~~--------~l~~ 212 (330)
T PRK05664 145 RLLAWHARLAARGGWLVVDEAFMDNT----PQHSLAACAHRPGLIVLRSFGKFFGLAGARLGFVLAEP--------ALLR 212 (330)
T ss_pred HHHHHHHHHHhcCCEEEEECCcccCC----CcccccccccCCCEEEEeeccccccCCCcceEEEEeCH--------HHHH
Confidence 99999999999999999999998654 11244455555689999999999999999999999965 6788
Q ss_pred HHHhhccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCccccCCC
Q 014936 274 RMKKYFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLDDI 353 (415)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~~~~ 353 (415)
.+..... .+..+...|.++..+|.+. .+.++.++.++++++.+.+.|+++ ++. . .+..++|+|++++
T Consensus 213 ~~~~~~~-~~~~~~~~~~~~~~~L~~~--~~~~~~~~~~~~~r~~l~~~L~~~-~~~-~-~~~~~~f~~~~~~------- 279 (330)
T PRK05664 213 ALAELLG-PWTVSGPTRWLAQAALADT--PWQRRQRERLLAASQRLAALLRRH-GLT-P-AGGCALFQWVRTE------- 279 (330)
T ss_pred HHHHhcC-CCCCCHHHHHHHHHHHhCh--HHHHHHHHHHHHHHHHHHHHHHHC-CCc-c-cCCcceEEEEecC-------
Confidence 8876643 3466788899999999753 566788899999999999999987 554 2 2333478887763
Q ss_pred CCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEeeCChhhHHHHHHHHHHHHH
Q 014936 354 IDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFAVDPYSLEECLDRIKSFYQ 406 (415)
Q Consensus 354 ~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~~~l~~~l~~l~~~~~ 406 (415)
+..++...+ .++||.+.+ |+..+++||+++.+.++.+++++.|+.+.+
T Consensus 280 -~~~~~~~~l-~~~gi~v~~---f~~~~~iRis~~~~~~~~~~l~~al~~~~~ 327 (330)
T PRK05664 280 -DAAALHEFL-ARRGILTRL---FEQPASLRFGLPADEADWARLDQALLAYRK 327 (330)
T ss_pred -CHHHHHHHH-HHCCeEEEE---CCCCCeEEEECCCCHHHHHHHHHHHHHHHh
Confidence 355665554 677999975 445689999998666667777777665544
No 103
>TIGR01140 L_thr_O3P_dcar L-threonine-O-3-phosphate decarboxylase. This family contains pyridoxal phosphate-binding class II aminotransferases (see PFAM:PF00222) closely related to, yet distinct from, histidinol-phosphate aminotransferase (HisC). It is found in cobalamin biosynthesis operons in Salmonella typhimurium and Bacillus halodurans (each of which also has HisC) and has been shown to have L-threonine-O-3-phosphate decarboxylase activity in Salmonella. Although the gene symbol cobD was assigned in Salmonella, cobD in other contexts refers to a different cobalamin biosynthesis enzyme, modeled by pfam03186 and called cbiB in Salmonella.
Probab=100.00 E-value=6.3e-40 Score=302.91 Aligned_cols=311 Identities=19% Similarity=0.232 Sum_probs=250.2
Q ss_pred CcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHH
Q 014936 34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAI 113 (415)
Q Consensus 34 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al 113 (415)
+++.++|+.|.+. ++++ ..+... ..+..|+++.+ +++|+.+++++ ++++++|++|+|+++++
T Consensus 16 ~~~~~~~~~~~~~----~~~~--~~~~~~-----~~~~~y~~~~~-~~lr~~la~~~------~~~~~~i~~t~G~~~~i 77 (330)
T TIGR01140 16 PEDWLDFSTGINP----LGPP--VPPIPA-----SAWARYPDPEY-DELRAAAAAYY------GLPAASVLPVNGAQEAI 77 (330)
T ss_pred hhheeEccccCCC----CCCC--hhhcch-----HHHhhCCCccH-HHHHHHHHHHh------CCChhhEEECCCHHHHH
Confidence 5578999999854 2222 222111 13457888765 99999999998 46789999999999999
Q ss_pred HHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHH
Q 014936 114 DVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQ 193 (415)
Q Consensus 114 ~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~ 193 (415)
.++..++ .+| .|++++|+|..+...++..|.++..++ |++.+++.++ +++++++++|+||||.+++.+
T Consensus 78 ~~~~~~l-~~g-~vl~~~p~y~~~~~~~~~~g~~~~~~~---------d~~~l~~~~~-~~~~v~i~~p~NPtG~~~~~~ 145 (330)
T TIGR01140 78 YLLPRLL-APG-RVLVLAPTYSEYARAWRAAGHEVVELP---------DLDRLPAALE-ELDVLVLCNPNNPTGRLIPPE 145 (330)
T ss_pred HHHHHHh-CCC-eEEEeCCCcHHHHHHHHHcCCEEEEeC---------CHHHHHhhcc-cCCEEEEeCCCCCCCCCCCHH
Confidence 9987664 677 799999999999999999999988875 7888988884 577899999999999999999
Q ss_pred HHHHHHHHHhhcCcEEEEccccCCcccCCCCccccccc-CCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHH
Q 014936 194 HLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVF-GSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVV 272 (415)
Q Consensus 194 ~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~-~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~ 272 (415)
++++|+++|+++|+++|+||+|..+.+.. ++..+ +..+++++++||||.|+++|+|+||+++++ +++
T Consensus 146 ~~~~l~~~a~~~~~~ii~De~y~~~~~~~----~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~--------~~~ 213 (330)
T TIGR01140 146 TLLALAARLRARGGWLVVDEAFIDFTPDA----SLAPQAARFPGLVVLRSLTKFFGLAGLRLGFVVAHP--------ALL 213 (330)
T ss_pred HHHHHHHHhHhcCCEEEEECcccccCCcc----chhhHhccCCCEEEEEecchhhcCchhhhhheeCCH--------HHH
Confidence 99999999999999999999999877531 22222 234678999999999999999999999865 677
Q ss_pred HHHHhhccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCccccCC
Q 014936 273 ERMKKYFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLDD 352 (415)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~~~ 352 (415)
+.+..... .++.++++|.++..++++ .++.++.+++++++++.+.+.|++++.+. + .|.+|+|+|++++
T Consensus 214 ~~l~~~~~-~~~~s~~~q~~~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~~~~~-~-~~~~~~f~~~~~~------ 282 (330)
T TIGR01140 214 ARLREALG-PWTVNGPARAAGRAALAD--TAWQAATRARLAAERARLAALLARLGGLE-V-VGGTALFLLVRTP------ 282 (330)
T ss_pred HHHHhcCC-CCCchHHHHHHHHHHHhc--hHHHHHHHHHHHHHHHHHHHHHHhCCCce-E-CCCCCeEEEEEcC------
Confidence 77776543 356788899999999975 35677888999999999999999986565 4 5678999999875
Q ss_pred CCCHHHHHHHHHhhcCeEEEcCCCCCC--CCeEEEEeeCChhhHHHHHHHH
Q 014936 353 IIDDIDFCFKLAKEESVIILPGTAVGL--KNWLRVTFAVDPYSLEECLDRI 401 (415)
Q Consensus 353 ~~~~~~~~~~ll~~~gi~v~~g~~~~~--~~~iRi~~~~~~~~l~~~l~~l 401 (415)
+..++.+.++ ++||.+.||..|.. .+++||+++.+.++ +.++++|
T Consensus 283 --~~~~l~~~l~-~~gi~v~pg~~f~~~~~~~iRi~~~~~~~~-~~~~~~l 329 (330)
T TIGR01140 283 --DAAALHEALA-RRGILIRDFDNFPGLDPRYLRFALPTDEEN-DRLEEAL 329 (330)
T ss_pred --CHHHHHHHHH-HCCEEEEECCCCCCCCCCEEEEEecCHHHH-HHHHHhh
Confidence 3567777775 56999999999853 57999999876665 7776665
No 104
>PRK08354 putative aminotransferase; Provisional
Probab=100.00 E-value=6.5e-39 Score=293.66 Aligned_cols=301 Identities=19% Similarity=0.269 Sum_probs=225.1
Q ss_pred cCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHH
Q 014936 33 NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQA 112 (415)
Q Consensus 33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~a 112 (415)
+..++++|+.|.+. ++ ++.+.+++.+.+.. ...|+. ...+|++++++++ ++|++|+|++++
T Consensus 6 ~~~~~i~l~~~~np----~~-p~~~~~a~~~~~~~--~~~yp~---~~~l~~~ia~~~~---------~~I~vt~G~~~a 66 (311)
T PRK08354 6 REEGLIDFSASVNP----YP-PEWLDEMFERAKEI--SGRYTY---YEWLEEEFSKLFG---------EPIVITAGITEA 66 (311)
T ss_pred CccceeEecCCCCC----CC-CHHHHHHHHHHHHH--hhcCCC---hHHHHHHHHHHHC---------CCEEECCCHHHH
Confidence 45678999999643 33 47889999877553 346764 3789999999982 479999999999
Q ss_pred HHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCH
Q 014936 113 IDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSY 192 (415)
Q Consensus 113 l~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~ 192 (415)
+..++..+ .+||+|++++|+|+.+...++..|.++..++ +|++.+++.++ +++.+++++||||||.+++.
T Consensus 67 l~~~~~~~-~~gd~vlv~~P~y~~~~~~~~~~g~~~~~~~--------~d~~~l~~~~~-~~~~vi~~~P~NPTG~~~~~ 136 (311)
T PRK08354 67 LYLIGILA-LRDRKVIIPRHTYGEYERVARFFAARIIKGP--------NDPEKLEELVE-RNSVVFFCNPNNPDGKFYNF 136 (311)
T ss_pred HHHHHHhh-CCCCeEEEeCCCcHHHHHHHHHcCCEEeecC--------CCHHHHHHhhc-CCCEEEEecCCCCCCCccCH
Confidence 99888655 4899999999999999999999999987642 57888988876 56789999999999999999
Q ss_pred HHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHH
Q 014936 193 QHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVV 272 (415)
Q Consensus 193 ~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~ 272 (415)
+++++|+++|+++|+++|+||+|.++.+++.. . ..+++++++||||.|+++|+|+||+++ +.
T Consensus 137 ~~l~~l~~~a~~~~~~li~De~y~~f~~~~~~------~-~~~~vi~~~S~SK~~~l~GlRiG~~v~-----------~~ 198 (311)
T PRK08354 137 KELKPLLDAVEDRNALLILDEAFIDFVKKPES------P-EGENIIKLRTFTKSYGLPGIRVGYVKG-----------FE 198 (311)
T ss_pred HHHHHHHHHhhhcCcEEEEeCcchhccccccc------c-CCCcEEEEeccHhhcCCccceeeeeee-----------hH
Confidence 99999999999999999999999998876421 1 145799999999999999999999997 23
Q ss_pred HHHHhhccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCccccCC
Q 014936 273 ERMKKYFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLDD 352 (415)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~~~ 352 (415)
+.++.... .+..+...+.++..+++. ..+++.+.++.+++.++.+.+.+ ...|. +.|+|++++
T Consensus 199 ~~l~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~l--------~~~~~-~~~~~~~~~------ 261 (311)
T PRK08354 199 EAFRSVRM-PWSIGSTGYAFLEFLIED-DFEHLRKTMPLIWREKERFEKAL--------YVKSD-ANFFIKDVG------ 261 (311)
T ss_pred HHHHHcCC-CccCCHHHHHHHHHHHHh-HHHHHHHHHHHHHHHHHHHHHhc--------CCCCC-CcEEEEECC------
Confidence 44544432 344555667777666653 22444555555555544443322 11344 455556553
Q ss_pred CCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEeeCCh--hhHHHHHHH
Q 014936 353 IIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFAVDP--YSLEECLDR 400 (415)
Q Consensus 353 ~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~--~~l~~~l~~ 400 (415)
++.++...+ .++||.+.||..|+.++++||+++.++ +.+..+++.
T Consensus 262 --~~~~~~~~l-~~~gv~v~~g~~f~~~~~iRi~~~~~~~~~~l~~al~~ 308 (311)
T PRK08354 262 --DAEKFVEFL-KRNGILVRDCTSFGLPGYIRFSVRDREENEKLIRALRE 308 (311)
T ss_pred --CHHHHHHHH-HHCCeEEEecccCCCCCeEEEEeCCHHHHHHHHHHHHH
Confidence 356676665 567999999999987899999997543 444444443
No 105
>KOG0634 consensus Aromatic amino acid aminotransferase and related proteins [Amino acid transport and metabolism]
Probab=100.00 E-value=7.9e-39 Score=282.54 Aligned_cols=329 Identities=19% Similarity=0.274 Sum_probs=267.1
Q ss_pred CCCCCCCCcHHHHHHHHHHHhhhCCCC-CCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEE
Q 014936 71 NGYAPTAGLPLTRRAIAEYLSRDLPYK-LTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVR 149 (415)
Q Consensus 71 ~~y~~~~g~~~lr~~ia~~~~~~~~~~-~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~ 149 (415)
.+|+...|.++|...+.++........ ...-+|++|+|.+.++..+++.++++||.|+++.++|.+.....+..|++++
T Consensus 94 lQYg~s~G~peLl~fik~h~~~~ih~p~~~~wdiiit~G~t~~l~~~l~~~~N~gd~vlie~~ty~~AL~s~~a~gv~~i 173 (472)
T KOG0634|consen 94 LQYGQSSGIPELLLFIKDHNRPTIHAPPYKNWDIIITNGNTDGLFKVLRTLINRGDHVLIEEYTYPSALQSMEALGVKII 173 (472)
T ss_pred hccccccCcHHHHHHHHHhccccccCCCCCCceEEEecCCchHHHHHHHHhhcCCCceEEecccchHHHHhccccCceEE
Confidence 589999999999999999765233323 3445999999999999999999999999999999999999999999998888
Q ss_pred EeeccCCCCCCCChhHHHhhcCCCc--------eEEEecCC--CCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcc
Q 014936 150 HFDLLPDKGWEVDLDDIESLADQNT--------VALVIINP--GNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLV 219 (415)
Q Consensus 150 ~~~~~~~~~~~~~~~~l~~~~~~~~--------~~v~i~~p--~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~ 219 (415)
.|+.+ ..++++|.|++.++... .-|+.+-| +||||..++.+..++|.++|++|+++||+||.|..+.
T Consensus 174 pv~md---~~Gi~pE~l~~il~~w~~~~~k~~~p~vlYTIPTgqNPTG~tls~errk~iy~LArKyDfLIVeDdpYy~Lq 250 (472)
T KOG0634|consen 174 PVKMD---QDGIDPESLEEILSNWKPGSYKKPKPHVLYTIPTGQNPTGNTLSLERRKKIYQLARKYDFLIVEDDPYYFLQ 250 (472)
T ss_pred ecccc---CCCCCHHHHHHHHhcCCcccccCCCCeEEEeCcCCCCCCCCccCHHHHHHHHHHHHHcCEEEEecCccceee
Confidence 88773 44689999998775311 23666666 8999999999999999999999999999999999999
Q ss_pred cCC---CC----------------cccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhh-c
Q 014936 220 FGD---KP----------------FVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKY-F 279 (415)
Q Consensus 220 ~~~---~~----------------~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~-~ 279 (415)
++. .. ..++.+++.+.+||.+.||||. .+||+|+||+.+++ .+++++-.. .
T Consensus 251 ~~~y~~~~~~~~p~~s~~~f~k~l~~sflslDtdGrVIr~dSFSKi-iaPGlRlG~it~~~--------~~l~ril~~ae 321 (472)
T KOG0634|consen 251 MNTYNPSLELESPAHSSSMFLKSLVPSFLSLDTDGRVIRNDSFSKI-IAPGLRLGWITGNS--------LFLKRILDLAE 321 (472)
T ss_pred ccccCCCccccCccccHHHHHHhhcCCcccccccccEEeccchhhh-hcCcceeEEeecCH--------HHHHHHhhhcc
Confidence 873 11 2234556778899999999999 79999999999976 456665554 3
Q ss_pred cccCCchhHHHHHHHHhhCCCcH----HHHHHHHHHHHHHHHHHHHHhhc-CCCC-cCCCCCCCceEEEEecCcccc---
Q 014936 280 DILGDPATFIQAAVPSILQQPDE----VFFKKTLNLLKQSVDICYNKIKE-IPCI-SCPHKPEGSMAVMLKLNLSLL--- 350 (415)
Q Consensus 280 ~~~~~~~~~~~~a~~~~l~~~~~----~~~~~~~~~~~~~~~~l~~~l~~-~~~~-~~~~~p~~g~~~~~~l~~~~~--- 350 (415)
..+.+++..+|..+.+.|+...+ +|+.+.+..+..++..+..++.+ +|.- ..+..|.+|+|+|++++-..+
T Consensus 322 ~~t~~pSg~sq~iv~a~l~~wgqeG~~~wi~~l~~~Yt~Rrn~~l~Al~kylp~~~~~~~~P~aGmFiwv~i~~~~~~~~ 401 (472)
T KOG0634|consen 322 VATSGPSGFSQGIVYAMLKRWGQEGFLRWIQHLRSSYTERRNALLSALDKYLPKSVCEYHPPKAGMFIWVEIPYINFDTK 401 (472)
T ss_pred eeecCcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeeEEecCCcceEEEEEecccccccc
Confidence 34566888999999999887654 67788888899999999999986 6654 336689999999999972111
Q ss_pred CCCCCHHHHHHHHHhhcCeEEEcCCCCCC------C-CeEEEEee-CChhhHHHHHHHHHHHHHHHHHH
Q 014936 351 DDIIDDIDFCFKLAKEESVIILPGTAVGL------K-NWLRVTFA-VDPYSLEECLDRIKSFYQRHAKQ 411 (415)
Q Consensus 351 ~~~~~~~~~~~~ll~~~gi~v~~g~~~~~------~-~~iRi~~~-~~~~~l~~~l~~l~~~~~~~~~~ 411 (415)
++..+.++++...+.++||.+.+|..|.. . -++|++++ .+.|+++++++++..+++++...
T Consensus 402 ~~i~q~~e~i~~~~vk~gV~~v~G~~F~v~p~~s~~kiffRls~a~a~~e~l~~g~~rf~~~ike~f~~ 470 (472)
T KOG0634|consen 402 KSINQIEEIIFIKAVKNGVKLVCGSWFMVDPESSWSKIFFRLSIAFAEPEKLDEGIERFGSVIKEHFIT 470 (472)
T ss_pred cchHHHHHHHHHHHHHCCeEEecCceeEEcCccCCCcceEEEEeecCCHHHHHHHHHHHHHHHHHHhhc
Confidence 12223567778888899999999998854 2 38999996 67899999999999999987654
No 106
>cd00609 AAT_like Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary hi
Probab=100.00 E-value=1.8e-36 Score=283.70 Aligned_cols=346 Identities=32% Similarity=0.541 Sum_probs=277.5
Q ss_pred eEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHH
Q 014936 38 ISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAM 117 (415)
Q Consensus 38 i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~ 117 (415)
+||+.|++. +.+++.+++++.+.........|++..|..++++.++++++...+....++++++++|+++++..++
T Consensus 1 ~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~t~a~~~~~ 76 (350)
T cd00609 1 IDLSIGEPD----FPPPPEVLEALAAAALRAGLLGYYPDPGLPELREAIAEWLGRRGGVDVPPEEIVVTNGAQEALSLLL 76 (350)
T ss_pred CCCCCCCCC----CCCCHHHHHHHHHHhhccCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCcceEEEecCcHHHHHHHH
Confidence 478888854 4556666666655222223457888899999999999999987665566889999999999999999
Q ss_pred HHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHH
Q 014936 118 ALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQK 197 (415)
Q Consensus 118 ~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~ 197 (415)
.++.++||+|+++.++|.++...++..|.++..++.+.......+.+.++....++++++++++|+||||.++|.+++++
T Consensus 77 ~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~v~i~~~~~~tG~~~~~~~l~~ 156 (350)
T cd00609 77 RALLNPGDEVLVPDPTYPGYEAAARLAGAEVVPVPLDEEGGFLLDLELLEAAKTPKTKLLYLNNPNNPTGAVLSEEELEE 156 (350)
T ss_pred HHhCCCCCEEEEcCCCchhHHHHHHHCCCEEEEEecccccCCccCHHHHHhhcCccceEEEEECCCCCCCcccCHHHHHH
Confidence 99999999999999999999999999999999999865443322226677777778999999999999999999999999
Q ss_pred HHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHHh
Q 014936 198 LAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKK 277 (415)
Q Consensus 198 i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~ 277 (415)
|+++|+++|+++|+|++|+.+.+.+.....+...+..+.++++.|++|.++.+|+|+||+++++ +++.+.+..
T Consensus 157 l~~~~~~~~~~~ivD~a~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~K~~~~~g~~~G~i~~~~-------~~~~~~~~~ 229 (350)
T cd00609 157 LAELAKKHGILIISDEAYAELVYDGEPPPALALLDAYERVIVLRSFSKTFGLPGLRIGYLIAPP-------EELLERLKK 229 (350)
T ss_pred HHHHHHhCCeEEEEecchhhceeCCcccccccCcCccCcEEEEeecccccCCcccceEEEecCH-------HHHHHHHHH
Confidence 9999999999999999999888765543222233344567999999999888999999999864 146677666
Q ss_pred hcc-ccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCccccCCCCCH
Q 014936 278 YFD-ILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLDDIIDD 356 (415)
Q Consensus 278 ~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~~~~~~~ 356 (415)
... .+.+++...+.++..+++... ++.++..++++++++.+.+.|++++... ...+..|+++|++++.. ..
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~l~~~L~~~~~~~-~~~~~~g~~~~~~~~~~------~~ 301 (350)
T cd00609 230 LLPYTTSGPSTLSQAAAAAALDDGE-EHLEELRERYRRRRDALLEALKELGPLV-VVKPSGGFFLWLDLPEG------DD 301 (350)
T ss_pred HHHhcccCCChHHHHHHHHHHhCcH-HHHHHHHHHHHHHHHHHHHHHHhcCCcc-ccCCCccEEEEEecCCC------Ch
Confidence 533 246778889999998988643 6788889999999999999999875443 23678899999988642 24
Q ss_pred HHHHHHHHhhcCeEEEcCCCCC--CCCeEEEEeeCChhhHHHHHHHHH
Q 014936 357 IDFCFKLAKEESVIILPGTAVG--LKNWLRVTFAVDPYSLEECLDRIK 402 (415)
Q Consensus 357 ~~~~~~ll~~~gi~v~~g~~~~--~~~~iRi~~~~~~~~l~~~l~~l~ 402 (415)
.+.+.+++.++||.+.++..|. .+.++|++++..+++++.++++|+
T Consensus 302 ~~~~~~~l~~~gi~i~~~~~~~~~~~~~iRi~~~~~~~~i~~~~~al~ 349 (350)
T cd00609 302 EEFLERLLLEAGVVVRPGSAFGEGGEGFVRLSFATPEEELEEALERLA 349 (350)
T ss_pred HHHHHHHHHhCCEEEecccccccCCCCeEEEEeeCCHHHHHHHHHHhh
Confidence 5677778888999999988776 578999999766999999999885
No 107
>PRK13238 tnaA tryptophanase/L-cysteine desulfhydrase, PLP-dependent; Provisional
Probab=100.00 E-value=7.6e-35 Score=277.03 Aligned_cols=345 Identities=14% Similarity=0.117 Sum_probs=255.5
Q ss_pred cCcceeEecccCCCCCCCCCCcH---HHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCCh
Q 014936 33 NEKKVISLAMGDPTVHSCFHTTH---VATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGC 109 (415)
Q Consensus 33 ~~~~~i~l~~g~~~~~~~~~~~~---~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~ 109 (415)
.+.++++|+.|+|.+. +.+++ ++.+++.+++..+. ..|++..|.++||+++++++ ..+++++|+|+
T Consensus 34 ~g~~~~~L~~g~p~~D--~~tds~t~a~~~a~~~a~~~g~-~~Y~~~~g~~~Lreaia~~~--------~~~~vv~t~gg 102 (460)
T PRK13238 34 AGYNPFLLKSEDVFID--LLTDSGTGAMSDRQWAAMMRGD-EAYAGSRSYYRLEDAVKDIF--------GYPYTIPTHQG 102 (460)
T ss_pred cCCCEEeCCCCCCCCC--CCCCCCchhhhHHHHHHHHhCC-cccCCCCCHHHHHHHHHHHh--------CCCcEEECCCH
Confidence 4889999999998422 44433 67888888876554 47999999999999999999 34689999999
Q ss_pred HHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCC------CCCC--CChhHHHhhcCC----CceEE
Q 014936 110 TQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPD------KGWE--VDLDDIESLADQ----NTVAL 177 (415)
Q Consensus 110 ~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~------~~~~--~~~~~l~~~~~~----~~~~v 177 (415)
++++.+++.+++++|| |++++|.|..+.......|++++.++.++. ++|. +|+++|++.+++ ++++|
T Consensus 103 t~A~~~~~~all~pGD-Vii~~p~~~~~~~~i~~~G~~~v~v~~~~~~~~~~~~~f~g~id~e~Le~~i~~~~~~~tk~I 181 (460)
T PRK13238 103 RAAEQILFPVLIKKGD-VVPSNYHFDTTRAHIELNGATAVDLVIDEALDTGSRHPFKGNFDLEKLEALIEEVGAENVPFI 181 (460)
T ss_pred HHHHHHHHHHhCCCCC-EEccCCcccchHHHHHHcCCEEEEEeccccccccccccccCCcCHHHHHHHHhhcCCCceeEE
Confidence 9999999999999999 999999999999989999999999988542 3444 999999999874 68999
Q ss_pred EecCCCCccc-cCCCHHHHHHHHHHHhhcCcEEEEccccCC--cccCC-----CCcccccccCCCCCeEEEccCccccCC
Q 014936 178 VIINPGNPCG-NVYSYQHLQKLAETANKLKTLVIADEVYGH--LVFGD-----KPFVPMGVFGSTVPILTLGSLSKRWIV 249 (415)
Q Consensus 178 ~i~~p~nptG-~~~~~~~l~~i~~~~~~~~~~li~De~~~~--~~~~~-----~~~~~~~~~~~~~~~i~~~s~sK~~~~ 249 (415)
++++|+|||| .+++.+++++|+++|++||+++|+|+++.. ..|.. ....++..+ +..++|++|.+.+
T Consensus 182 vl~~p~NptGG~v~s~~~l~~I~~ia~~~gi~li~Daa~~~e~a~f~~~~e~g~~~~si~~i-----~~~~~s~~D~~~~ 256 (460)
T PRK13238 182 VMTITNNSAGGQPVSMANLRAVYEIAKKYGIPVVIDAARFAENAYFIKQREPGYKDKSIKEI-----AREMFSYADGLTM 256 (460)
T ss_pred EEecCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEECcchhhhhhhhhhccccccCCCHHHH-----hhhhcccCcEEEE
Confidence 9999999997 999999999999999999999999997742 22321 112222211 1223344444444
Q ss_pred CCceE------EEEEeeCCCCCCChHHHHHHHHhhc-----cccC-CchhHHHHHHHHhhCCC-cHHHHHHHHHHHHHHH
Q 014936 250 PGWRL------GWFVTTDPCGMFRKPKVVERMKKYF-----DILG-DPATFIQAAVPSILQQP-DEVFFKKTLNLLKQSV 316 (415)
Q Consensus 250 ~G~r~------G~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~-~~~~~~~~a~~~~l~~~-~~~~~~~~~~~~~~~~ 316 (415)
+|+|. |++++++ +++.+.++... ..+. +.+...|.|++..|.+. .+++++.+ .+++
T Consensus 257 Sg~K~g~~~~GG~i~~~d-------~~l~~~~~~~~~~~~g~~t~~g~~~~~~~Ala~~l~e~~~~~~~~~~----~~~~ 325 (460)
T PRK13238 257 SAKKDAMVNIGGLLCFRD-------EDLFTECRTLCILYEGFPTYGGLAGRDMEALAVGLYEGMDEDYLAYR----IGQV 325 (460)
T ss_pred ecccCCCCcceeEEEcCh-------HHHHHHhhhcccccCCcccccCcHHHHHHHHHhhHHHhhChHHHHHH----HHHH
Confidence 44443 4555543 25777776552 1122 33555577777766542 22334333 3367
Q ss_pred HHHHHHhhcCCCCcCCCCCCCceEEEEecCccc--cCC-CCCHHHHHHHHHhhcCeEEEcCCCCCC-------------C
Q 014936 317 DICYNKIKEIPCISCPHKPEGSMAVMLKLNLSL--LDD-IIDDIDFCFKLAKEESVIILPGTAVGL-------------K 380 (415)
Q Consensus 317 ~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~--~~~-~~~~~~~~~~ll~~~gi~v~~g~~~~~-------------~ 380 (415)
++|.+.|++. |+. +..|.+|+++++++.... .++ ...+.+++.+|+++.||.+.|++.|.. .
T Consensus 326 ~~l~~~L~~~-G~~-~~~p~Gg~~v~~d~~~~~~~~~~~~~~~~~~a~~L~~e~GV~~~~~~~f~~~~~~~~~~~~~~~~ 403 (460)
T PRK13238 326 EYLGEGLEEA-GVP-IQTPAGGHAVFVDAGKFLPHIPAEQFPAQALACELYLEAGIRGVEIGSLLLGRDPKTGEQLPAPA 403 (460)
T ss_pred HHHHHHHHHC-CCC-eEccCCceEEEEEchhcCCCCCCCCCchHHHHHHHHHHcCeeeecccceecccCCCCccccCCcc
Confidence 8899999887 888 448999999999885421 100 013578999999999999999887642 2
Q ss_pred CeEEEEeeC---ChhhHHHHHHHHHHHHHH
Q 014936 381 NWLRVTFAV---DPYSLEECLDRIKSFYQR 407 (415)
Q Consensus 381 ~~iRi~~~~---~~~~l~~~l~~l~~~~~~ 407 (415)
..+|+++.. +++.++.+.++|..+.++
T Consensus 404 ~~~Rla~~rr~~~~~~~~~~~~~l~~~~~~ 433 (460)
T PRK13238 404 ELLRLAIPRRVYTQSHMDYVAEALKAVKEN 433 (460)
T ss_pred ceEEEecccccCCHHHHHHHHHHHHHHHHh
Confidence 689999965 899999999999987743
No 108
>COG3977 Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=7.2e-34 Score=239.23 Aligned_cols=381 Identities=22% Similarity=0.315 Sum_probs=271.4
Q ss_pred CccccCCccCCcchhhHHHHHHHhhhcccccccCcceeEecccCCCCCCCCCCcHHHHHHHHH----HHhcC----CCCC
Q 014936 1 MEISNGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAE----ALLSE----KFNG 72 (415)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~----~~~~~----~~~~ 72 (415)
|.+|..|.++. ...++..+++.+-+-++ ....+.++-|+|.. .|++.+..++ .+..+ ...+
T Consensus 1 m~fs~fGdkft-~~sGi~~lMdDl~d~Lr----t~g~imLggGNPa~------iPem~~~f~~~~aemla~~~~~e~~cn 69 (417)
T COG3977 1 MQFSLFGDKFT-RHSGITQLMDDLNDGLR----TPGAIMLGGGNPAR------IPEMDDYFQDLLAEMLASGKATEALCN 69 (417)
T ss_pred CchhhhhHHhh-hhhhHHHHHHHHHhhcc----CCCceeeCCCCccc------ChhHHHHHHHHHHHHHhcchHHHHHhc
Confidence 44455444432 23567777777777663 45599999999753 3445554443 33332 3578
Q ss_pred CCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcC---CC--CEEEEc-CCCCcchHHHHHhCCC
Q 014936 73 YAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSR---PG--ANILLP-RPGFPIYELSAAFRHI 146 (415)
Q Consensus 73 y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~---~g--d~vi~~-~p~y~~~~~~~~~~g~ 146 (415)
|..+.|...|.+++++++++.+|+.+++++|.+|+|++++..-++..+.+ .| ..|+++ .|.|-+|.+....-.+
T Consensus 70 Y~~pQG~~~li~ala~~l~~~ygwnit~~NIalTnGSQs~fFYlfNlF~G~~sdG~~k~illPLaPeYiGY~d~~l~~d~ 149 (417)
T COG3977 70 YDGPQGKAVLIDALAKMLRREYGWNITAQNIALTNGSQSAFFYLFNLFAGRRSDGTEKKILLPLAPEYIGYADAGLEEDL 149 (417)
T ss_pred CCCCcchhHHHHHHHHHHHHHhCCCCccceeeecCCccchHHHHHHHhcCccCCCcceeEeeccChhhccccccccCccc
Confidence 99999999999999999999999999999999999999999888877753 23 356655 7899887665432222
Q ss_pred eEEE---eeccCCCC--CCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccC
Q 014936 147 EVRH---FDLLPDKG--WEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFG 221 (415)
Q Consensus 147 ~~~~---~~~~~~~~--~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~ 221 (415)
=|.. +...+.+. +.+|.++|. +.+.+.++.++.|.||||.+++.+++.+|.+++++||+++++|.+|+.-- .
T Consensus 150 fVs~kP~iel~~~g~FKY~vDF~~l~--i~e~~g~ic~SRPtNPTGNVlTdeE~~kldalA~~~giPliIDnAYg~PF-P 226 (417)
T COG3977 150 FVSAKPNIELLPAGQFKYHVDFEHLH--IGESTGAICVSRPTNPTGNVLTDEELAKLDALARQHGIPLIIDNAYGVPF-P 226 (417)
T ss_pred eeeccCCcccccccceeeccCHHHcc--cccccceEEecCCCCCCCCcccHHHHHHHHHHhhhcCCcEEEecccCCCC-C
Confidence 1211 11112222 556777765 34678889999999999999999999999999999999999999997511 1
Q ss_pred CCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhhc-cccCCchhHHHHHHHHhhCCC
Q 014936 222 DKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYF-DILGDPATFIQAAVPSILQQP 300 (415)
Q Consensus 222 ~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~a~~~~l~~~ 300 (415)
+--+.. ...-..++++.|.|+||. |+||.|+|.++++. ++++.+..+. ..+..+....++.+..+++.+
T Consensus 227 ~iifsd-~~~~w~~NiilC~SLSK~-GLPG~R~GIiIane--------~viqaitnmn~iisLap~~~G~Aia~~mie~g 296 (417)
T COG3977 227 GIIFSD-ATPLWNENIILCMSLSKL-GLPGSRCGIIIANE--------KVIQAITNMNGIISLAPGRMGPAIAAEMIESG 296 (417)
T ss_pred ceeccc-ccccCCCCEEEEeehhhc-CCCCcceeEEEccH--------HHHHHHHhccceeeecCCCccHHHHHHHhhcc
Confidence 111111 122345789999999998 99999999999865 6888887763 344567778888888888875
Q ss_pred cH-HHHHH-HHHHHHHHHHHHHHHhhc-CCCCcC-CCCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCC
Q 014936 301 DE-VFFKK-TLNLLKQSVDICYNKIKE-IPCISC-PHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTA 376 (415)
Q Consensus 301 ~~-~~~~~-~~~~~~~~~~~l~~~l~~-~~~~~~-~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~ 376 (415)
.- ..-++ .+--++++.....+.|++ +|...+ ...|+++.|+|+.+.+-.. +..++.++ |++.||.++||..
T Consensus 297 dl~rlseqVIrPFY~~~~q~~~~~l~~~lp~~~~~iHkpEGAIFlWLWf~dLPI----tt~~LYq~-LKa~Gvl~VPG~~ 371 (417)
T COG3977 297 DLLRLSEQVIRPFYRNRVQTTIAILRRYLPEYRCLIHKPEGAIFLWLWFKDLPI----TTEELYQR-LKARGVLMVPGHY 371 (417)
T ss_pred hHHHHHHHhhhHHHHHHHHHHHHHHHHhcCccceeeecCCcceeehhhhccCCC----CHHHHHHH-HHhCeEEEecccc
Confidence 41 11122 223445555555555553 443222 3479999999998875432 45566555 4788999999998
Q ss_pred CCC---------CCeEEEEeeCChhhHHHHHHHHHHHHHHHHH
Q 014936 377 VGL---------KNWLRVTFAVDPYSLEECLDRIKSFYQRHAK 410 (415)
Q Consensus 377 ~~~---------~~~iRi~~~~~~~~l~~~l~~l~~~~~~~~~ 410 (415)
|.. ..|+|+++.-+++++++.+.+|++.+++.-+
T Consensus 372 FFpGl~~ewpH~hqC~Rmn~~~~~~~ie~Gva~lae~ve~~yq 414 (417)
T COG3977 372 FFPGLDKEWPHTHQCMRMNYVPEPEKIEKGVAILAEEVERAYQ 414 (417)
T ss_pred cCCCCCCCCCCccceEEEecCCCHHHHHHHHHHHHHHHHHHHh
Confidence 864 4799999999999999999999999887554
No 109
>TIGR03576 pyridox_MJ0158 pyridoxal phosphate enzyme, MJ0158 family. Members of this archaeal protein family are pyridoxal phosphate enzymes of unknown function. Sequence similarity to SelA, a bacterial enzyme of selenocysteine biosynthesis, has led to some members being misannotated as functionally equivalent, but selenocysteine is made on tRNA in Archaea by a two-step process that does not involve a SelA homolog.
Probab=100.00 E-value=2.6e-33 Score=258.15 Aligned_cols=309 Identities=17% Similarity=0.152 Sum_probs=232.0
Q ss_pred CCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEE
Q 014936 48 HSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANI 127 (415)
Q Consensus 48 ~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~v 127 (415)
+.++..+|.++++..+.++.. . +...-+.+|++.+|+|+ +++++++++++|+++++..++.++.++||.|
T Consensus 29 ylgl~~~~~~~~~~~~~~~~~--~--g~~~~~~~Le~~lA~~~------g~~~e~ilv~~gg~~a~~~~~~al~~~gd~V 98 (346)
T TIGR03576 29 LTGLAGGFKIDEEDLELLETY--V--GPAIFEEKVQELGREHL------GGPEEKILVFNRTSSAILATILALEPPGRKV 98 (346)
T ss_pred cccCCCChhHHHHHHHHHHHh--c--CCHHHHHHHHHHHHHHc------CCCcceEEEECCHHHHHHHHHHHhCCCCCEE
Confidence 344667899999988887642 1 22234567777777777 4578999999999999999999999999999
Q ss_pred EEc---CCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhh
Q 014936 128 LLP---RPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANK 204 (415)
Q Consensus 128 i~~---~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~ 204 (415)
+++ .|+|..+...++..|+++..+ .++++++. .+++++|++ ++++++|.+++.+++++|+++|++
T Consensus 99 li~~~d~p~~~s~~~~~~l~ga~~~~~---------~~l~~l~~--~~~~~lIii-tg~s~~G~v~~~~~L~~i~~la~~ 166 (346)
T TIGR03576 99 VHYLPEKPAHPSIPRSCKLAGAEYFES---------DELSELKK--IDGTSLVVI-TGSTMDLKVVSEEDLKRVIKQAKS 166 (346)
T ss_pred EECCCCCCCchhHHHHHHHcCCEEecc---------CCHHHHhh--CcCceEEEE-ECCCCCCcccCHHHHHHHHHHHHH
Confidence 964 579999999999999876322 24555443 245676666 557899999999999999999999
Q ss_pred cCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhhcc-ccC
Q 014936 205 LKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFD-ILG 283 (415)
Q Consensus 205 ~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 283 (415)
+|+++++||+|+.+.....+..+...+.. .+++.||||+ ++|+|+||+++++ ++++.++.... +..
T Consensus 167 ~~~~livDEAy~~~~~~~~~~~~~~~~~~---divv~s~SKa--laG~r~G~v~~~~--------~li~~l~~~~~~~~~ 233 (346)
T TIGR03576 167 KEAIVLVDDASGARVRRLYGQPPALDLGA---DLVVTSTDKL--MDGPRGGLLAGRK--------ELVDKIKSVGEQFGL 233 (346)
T ss_pred cCCEEEEECCccccccccCCCCCHHHcCC---cEEEeccchh--ccccceEEEEeCH--------HHHHHHHHhhcCccc
Confidence 99999999999986533111122222222 2667799994 7899999999865 68888877643 233
Q ss_pred CchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCccccCCCCCHHHHHHHH
Q 014936 284 DPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKL 363 (415)
Q Consensus 284 ~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~l 363 (415)
+.+++.+.++.++|+... .+..++.++++++.+.+.++.+ . + .|..++|+|++++. .++.+++..+
T Consensus 234 s~~~~~~~aa~~aL~~~~---~~~~~~~l~~r~~~~~~~l~~~---~-~-~~~~~~f~~~~~~~------~~~~~~~~~l 299 (346)
T TIGR03576 234 EAQAPLLAAVVRALEEFE---LSRIRDAFKRKEEVYLRLFDKL---N-V-ERTPTGFVIKGVEE------EKLIEIGLDL 299 (346)
T ss_pred CccHHHHHHHHHHHhhcc---HHHHHHHHHHHHHHHHHHHHhC---C-C-CcCCCeEEEEeCCC------CCHHHHHHHH
Confidence 467788999999987532 3566788888888888888743 3 3 33445589998863 1356788899
Q ss_pred HhhcCeEEEcCCCCC-CCCeEEEEeeCChh---hHHHHHHHHHHHH
Q 014936 364 AKEESVIILPGTAVG-LKNWLRVTFAVDPY---SLEECLDRIKSFY 405 (415)
Q Consensus 364 l~~~gi~v~~g~~~~-~~~~iRi~~~~~~~---~l~~~l~~l~~~~ 405 (415)
++++||.+.|+..|. .++|+||+++.+++ +.+.+++.|++.+
T Consensus 300 l~~~gV~v~~~~~f~~~~~~vRis~~~~~~~~~~~~~~~~al~~~~ 345 (346)
T TIGR03576 300 LRNYGIITITAVGMPGASKTLRFDLAAKDAERIGDDYLVEAVKDSL 345 (346)
T ss_pred HHhCCEEEeCCcccCCCCCeEEEEEecChHHhcCHHHHHHHHHhcc
Confidence 999999999998874 47899999988765 7888988887654
No 110
>PLN02822 serine palmitoyltransferase
Probab=100.00 E-value=8.5e-34 Score=272.29 Aligned_cols=348 Identities=15% Similarity=0.120 Sum_probs=255.0
Q ss_pred cCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhc-CC-----CCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEe
Q 014936 33 NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLS-EK-----FNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVT 106 (415)
Q Consensus 33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~-~~-----~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~ 106 (415)
++++++||++++. +++..+|.+++++.++++. +. -..|++..++.+|+++||++++ .++.|+++
T Consensus 107 ~G~~~id~~s~~~---lgl~~~~~i~ea~~~al~~~G~g~~g~r~~yg~~~~~~~Lee~La~~~~-------~~~~i~~s 176 (481)
T PLN02822 107 NGKDVVNFASANY---LGLIGNEKIKESCTSALEKYGVGSCGPRGFYGTIDVHLDCETKIAKFLG-------TPDSILYS 176 (481)
T ss_pred CCceEEEeECCCc---CCCCCCHHHHHHHHHHHHHhCCCCcccCccccCHHHHHHHHHHHHHHhC-------CCCEEEEC
Confidence 4788999999973 3577799999999999876 21 1246666779999999999984 45788888
Q ss_pred CChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhc--CCCc-eEEEecCCC
Q 014936 107 SGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLA--DQNT-VALVIINPG 183 (415)
Q Consensus 107 ~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~-~~v~i~~p~ 183 (415)
+|++ ++..++.+++++||.|+++...|.++...+...|.+++.++++..+++..+++++++.. .+++ ++|++..++
T Consensus 177 ~G~~-a~~sai~a~~~~gd~Ii~d~~~H~s~~~~~~ls~~~~~~~~~nd~~~l~~~l~~~~~~~~~~~~~~~~Ivve~i~ 255 (481)
T PLN02822 177 YGLS-TIFSVIPAFCKKGDIIVADEGVHWGIQNGLYLSRSTIVYFKHNDMESLRNTLEKLTAENKRKKKLRRYIVVEAIY 255 (481)
T ss_pred CHHH-HHHHHHHHhCCCCCEEEEeCCccHHHHHHHHHcCCeEEEECCCCHHHHHHHHHHHhhhhcccCCCcEEEEEecCC
Confidence 8776 67889999999999999999988888888888899999988753322222333333221 1234 577777778
Q ss_pred CccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcc--cccccCCCCCeEEEccCccccCCCCceEEEEEeeC
Q 014936 184 NPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFV--PMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTD 261 (415)
Q Consensus 184 nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~--~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~ 261 (415)
|++|.+.+ +++|+++|++||+++|+||+|+.+.++..+.. ....+...+..++++||||+|+++| ||+++++
T Consensus 256 ~~~G~i~~---L~~i~~l~~k~~~~LIvDEa~s~gvlG~~G~G~~e~~~v~~~~~dii~~s~sKalg~~G---G~i~g~~ 329 (481)
T PLN02822 256 QNSGQIAP---LDEIVRLKEKYRFRVLLDESNSFGVLGKSGRGLSEHFGVPIEKIDIITAAMGHALATEG---GFCTGSA 329 (481)
T ss_pred CCCCCccC---HHHHHHHHHHcCCEEEEECCccccccCCCCCChHHHcCCCCCCCeEEEecchhhhhhCC---eEEEcCH
Confidence 99999977 78899999999999999999998777633322 2222222244588999999999888 9999865
Q ss_pred CCCCCChHHHHHHHHhhc-cccC--CchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCc
Q 014936 262 PCGMFRKPKVVERMKKYF-DILG--DPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGS 338 (415)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g 338 (415)
++++.++... ..++ ..++..+.++.++|+.. +...+..++++++++++.+.|++++++. +..+.++
T Consensus 330 --------~ii~~~~~~~~~~~fsa~lPp~~~~Aa~~aL~~l--~~~~~~~~~l~~~~~~l~~~L~~~~g~~-~~~~~~s 398 (481)
T PLN02822 330 --------RVVDHQRLSSSGYVFSASLPPYLASAAITAIDVL--EDNPSVLAKLKENIALLHKGLSDIPGLS-IGSNTLS 398 (481)
T ss_pred --------HHHHHHHhcCCceeeccccCHHHHHHHHHHHHHH--HhCHHHHHHHHHHHHHHHHHHHhcCCcc-cCCCCCC
Confidence 6777766442 2222 33467777777777542 1235678899999999999999877887 4467788
Q ss_pred eEEEEecCccccCCCC-C---HHHHHHHHHhhcCeEEEcCCC--CCC---CCeEEEEee--CChhhHHHHHHHHHHHHHH
Q 014936 339 MAVMLKLNLSLLDDII-D---DIDFCFKLAKEESVIILPGTA--VGL---KNWLRVTFA--VDPYSLEECLDRIKSFYQR 407 (415)
Q Consensus 339 ~~~~~~l~~~~~~~~~-~---~~~~~~~ll~~~gi~v~~g~~--~~~---~~~iRi~~~--~~~~~l~~~l~~l~~~~~~ 407 (415)
+++++.++... .... + ..+++.++++++||.+.|+.. |.. +.++|++++ +++++|++++++|++++.+
T Consensus 399 pi~~l~l~~~~-~~~~~~~~~~~~~~~~Ll~e~GV~v~~~~~~~~~~~~~~~~lRi~is~~~t~edI~~~~~~l~~~~~~ 477 (481)
T PLN02822 399 PIVFLHLEKST-GSAKEDLSLLEHIADRMLKEDSVLVVVSKRSTLDKCRLPVGIRLFVSAGHTESDILKASESLKRVAAS 477 (481)
T ss_pred CEEEEEeCCCc-ccccchHHHHHHHHHHHHhcCCEEEEeeCCCCcCCCCCCCcEEEEECCCCCHHHHHHHHHHHHHHHHH
Confidence 89988886320 0000 1 356888888788999998743 321 357999884 7999999999999999887
Q ss_pred HH
Q 014936 408 HA 409 (415)
Q Consensus 408 ~~ 409 (415)
..
T Consensus 478 ~~ 479 (481)
T PLN02822 478 VL 479 (481)
T ss_pred Hh
Confidence 54
No 111
>KOG0258 consensus Alanine aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=4.3e-33 Score=242.50 Aligned_cols=348 Identities=26% Similarity=0.442 Sum_probs=273.4
Q ss_pred HHHHHHHHHHHhc--CCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhc-CCCCEEEEcC
Q 014936 55 HVATEAVAEALLS--EKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLS-RPGANILLPR 131 (415)
Q Consensus 55 ~~~~~a~~~~~~~--~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~-~~gd~vi~~~ 131 (415)
..+++.....+.. +....|....|.+-+|+.+|+|..++.|++.+|++|++|.|++.++..++..++ ++.+.|+++-
T Consensus 89 ~Dai~RA~~~L~~~gGs~GaYS~SqGv~~vR~~VA~~I~rRDG~p~~p~dI~LT~GAS~ai~~il~l~~~~~~~GvliPi 168 (475)
T KOG0258|consen 89 TDAIKRAKRILNDCGGSLGAYSDSQGVPGVRKHVAEFIERRDGIPADPEDIFLTTGASPAIRSILSLLIAGKKTGVLIPI 168 (475)
T ss_pred HHHHHHHHHHHHhcCCcccccccccCChhHHHHHHHHHHhccCCCCCHHHeeecCCCcHHHHHHHHHHhcCCCCceEeec
Confidence 3344444444443 356789999999999999999999999988999999999999999999998886 5678999999
Q ss_pred CCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCC-----CceEEEecCCCCccccCCCHHHHHHHHHHHhhcC
Q 014936 132 PGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ-----NTVALVIINPGNPCGNVYSYQHLQKLAETANKLK 206 (415)
Q Consensus 132 p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~-----~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~ 206 (415)
|.|+.|...+..+|...+.+-++.+++|.+|.++|++.+++ +++++++.||.||||++++.+-+++|+.+|.+++
T Consensus 169 PQYPLYsAti~l~~~~~v~YyLdEe~~W~ld~~el~~~~~eA~k~i~~r~lvvINPGNPTGqvls~e~ie~i~~fa~~~~ 248 (475)
T KOG0258|consen 169 PQYPLYSATISLLGGTQVPYYLDEESNWSLDVAELERSVDEARKGINPRALVVINPGNPTGQVLSEENIEGIICFAAEEG 248 (475)
T ss_pred CCCchhHHHHHHhCCcccceeeccccCCCCCHHHHHHHHHHHhccCCceEEEEECCCCccchhhcHHHHHHHHHHHHHcC
Confidence 99999999999999998888888899999999999887654 5678899999999999999999999999999999
Q ss_pred cEEEEccccCCcccCCC-Cccccc----ccC----CCCCeEEEccCccccCC-CCceEEEEEeeCCCCCCChHHHHHHHH
Q 014936 207 TLVIADEVYGHLVFGDK-PFVPMG----VFG----STVPILTLGSLSKRWIV-PGWRLGWFVTTDPCGMFRKPKVVERMK 276 (415)
Q Consensus 207 ~~li~De~~~~~~~~~~-~~~~~~----~~~----~~~~~i~~~s~sK~~~~-~G~r~G~~~~~~~~~~~~~~~~~~~~~ 276 (415)
++++.||+|...+|... .+.++. .++ ....++.++|.||.+.. .|.|-||+-.-+. +|+..+.+.
T Consensus 249 l~llaDEVYQ~Nvy~~~skFhSfKKvl~emg~~~~~~v~L~SfhSvSKGy~gECG~RGGYmEv~n~-----~prv~~qi~ 323 (475)
T KOG0258|consen 249 LVLLADEVYQDNVYTTGSKFHSFKKVLHEMGNPYPDNVSLASFHSVSKGYMGECGQRGGYMESLNR-----DPRVKQQIK 323 (475)
T ss_pred eEEechHHHHhhccCCCcchHhHHHHHHHhcCccCCceEEEeeecccccceeeecccCCeeecccC-----ChhHHHHHH
Confidence 99999999999998854 444321 122 12236888999999754 7999999976542 345666666
Q ss_pred hhccccCCchhHHHHHHHHhhCCCc------H---HHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCc
Q 014936 277 KYFDILGDPATFIQAAVPSILQQPD------E---VFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNL 347 (415)
Q Consensus 277 ~~~~~~~~~~~~~~~a~~~~l~~~~------~---~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~ 347 (415)
+......+++...|........... + ...+.....++++++.+.+.++.++|+.|- .+++++|++.++..
T Consensus 324 Kl~si~lc~~V~GQ~~vdl~VnPP~Pgd~Sy~~~~~Ekd~il~~l~~ra~l~~~~~ns~~gi~cn-~~qGAMY~fP~i~l 402 (475)
T KOG0258|consen 324 KLASIKLCPQVSGQKLVDLVVNPPKPGDPSYDLFSSEKDGILSSLRSRAKLTEDAFNSLEGISCN-PVQGAMYLFPQISL 402 (475)
T ss_pred HHHhhhhcCCccchhhhceecCCCCCCCcchhhhhhhhHhHHHHHHHHhHHHHHHHhhcCceeec-cCccceeecccccC
Confidence 6544445666667766665554322 1 234456678889999999999999999954 89999999876643
Q ss_pred cc-------cCCCCCHHHHHHHHHhhcCeEEEcCCCCCCC-C--eEEEEeeCChhhHHHHHHHHHHHHHHHHHH
Q 014936 348 SL-------LDDIIDDIDFCFKLAKEESVIILPGTAVGLK-N--WLRVTFAVDPYSLEECLDRIKSFYQRHAKQ 411 (415)
Q Consensus 348 ~~-------~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~-~--~iRi~~~~~~~~l~~~l~~l~~~~~~~~~~ 411 (415)
+. ..++..+.-++.+||+..||+++||+.||.. + ++|.++-... + +.+++++++-+++..+
T Consensus 403 P~kaie~A~~~~~~PD~FYc~~LLe~tGIcvVPGSGFGQ~~GtyH~R~TiLp~~--~-~~i~~~~~fH~~f~~~ 473 (475)
T KOG0258|consen 403 PPKAIEAAKALGIAPDEFYCLKLLEATGICVVPGSGFGQKEGTYHFRTTILPPG--L-EIIEKFKKFHAEFMDE 473 (475)
T ss_pred CHHHHHHHHHhCCCCcHHHHHHHHHhcCeEEecCCCCCCCCceeEEEEeecCch--h-HHHHHHHHHHHHHHHh
Confidence 21 1244567788999999999999999999973 3 6888883322 4 7888888887777654
No 112
>TIGR01822 2am3keto_CoA 2-amino-3-ketobutyrate coenzyme A ligase. This model represents a narrowly defined clade of animal and bacterial (almost exclusively Proteobacterial) 2-amino-3-ketobutyrate--CoA ligase. This enzyme can act in threonine catabolism. The closest homolog from Bacillus subtilis, and sequences like it, may be functionally equivalent but were not included in the model because of difficulty in finding reports of function.
Probab=100.00 E-value=8.2e-32 Score=255.77 Aligned_cols=331 Identities=14% Similarity=0.134 Sum_probs=237.1
Q ss_pred cCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCC---Cc----HHHHHHHHHHHhhhCCCCCCCCcEEE
Q 014936 33 NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTA---GL----PLTRRAIAEYLSRDLPYKLTPNDVFV 105 (415)
Q Consensus 33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~---g~----~~lr~~ia~~~~~~~~~~~~~~~i~i 105 (415)
++.+++||+.|++ ++++.+|++++++.+.+.... ..|++.. |. .++|+.+|++++ .+++++
T Consensus 36 ~g~~~i~~~~~~~---lg~~~~~~v~~~~~~~~~~~~-~~~~~s~~~~G~~~~~~~le~~ia~~~g--------~~~~ii 103 (393)
T TIGR01822 36 DGREVLNFCANNY---LGLSSHPDLIQAAKDALDEHG-FGMSSVRFICGTQDIHKELEAKIAAFLG--------TEDTIL 103 (393)
T ss_pred CCceEEEeeCCCc---cccCCCHHHHHHHHHHHHHhC-CCCCCcCcccCChHHHHHHHHHHHHHhC--------CCcEEE
Confidence 5788999999983 457889999999999887522 2455444 65 889999999983 357888
Q ss_pred eCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCC------CceEEEe
Q 014936 106 TSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ------NTVALVI 179 (415)
Q Consensus 106 ~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~------~~~~v~i 179 (415)
++|+++++..++.+++++||.|++++|+|+++...++..+.+...++ .+|++++++.+++ ++++|++
T Consensus 104 ~~~~~~a~~~~~~~l~~~gd~vi~~~~~~~s~~~~~~~~~~~~~~~~-------~~d~~~l~~~i~~~~~~~~~~~~v~~ 176 (393)
T TIGR01822 104 YASCFDANGGLFETLLGAEDAIISDALNHASIIDGVRLCKAKRYRYA-------NNDMADLEAQLKEARAAGARHRLIAT 176 (393)
T ss_pred ECchHHHHHHHHHHhCCCCCEEEEeccccHHHHHHHHhcCCceEEeC-------CCCHHHHHHHHHhhhhcCCCceEEEE
Confidence 89999999999999999999999999999999988888777765443 2688998887764 6778888
Q ss_pred cCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCC-CCCeEEEccCccccCCCCceEEEEE
Q 014936 180 INPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS-TVPILTLGSLSKRWIVPGWRLGWFV 258 (415)
Q Consensus 180 ~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~~~~G~r~G~~~ 258 (415)
.+++||||.+. ++++|+++|++||+++|+||+|+...++..+.......+. .+..++++|+||++ +|+|+||++
T Consensus 177 ~~v~~~tG~~~---~l~~i~~la~~~~~~li~De~~~~g~~~~~~~~~~~~~~~~~~~di~~~s~sK~l--~g~r~G~~~ 251 (393)
T TIGR01822 177 DGVFSMDGVIA---PLDEICDLADKYDALVMVDECHATGFLGPTGRGSHELCGVMGRVDIITGTLGKAL--GGASGGFTT 251 (393)
T ss_pred eCCccCCCCcC---CHHHHHHHHHHcCCEEEEECCccccCcCCCCCchHHhcCCCCCCeEEEEEChHHh--hCCCcEEEE
Confidence 88899999995 4788899999999999999999754433221111111111 13458899999984 478999998
Q ss_pred eeCCCCCCChHHHHHHHHhhc---cccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCC
Q 014936 259 TTDPCGMFRKPKVVERMKKYF---DILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKP 335 (415)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p 335 (415)
+++ ++.+.++... ....+.++..+.++.++++.. +..++.+++++++++++.+.|++. ++. +..+
T Consensus 252 ~~~--------~~~~~l~~~~~~~~~~~~~~~~~~~a~~~al~~~--~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~ 319 (393)
T TIGR01822 252 ARK--------EVVELLRQRSRPYLFSNSLPPAVVGASIKVLEML--EASNELRDRLWANTRYFRERMEAA-GFD-IKPA 319 (393)
T ss_pred eCH--------HHHHHHHHhCccceecCCCCHHHHHHHHHHHHHH--hcCHHHHHHHHHHHHHHHHHHHHc-CCC-CCCC
Confidence 864 5777665532 122333455555555665432 234567789999999999999886 776 3233
Q ss_pred CCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCC----CCCeEEEEee--CChhhHHHHHHHHHHHHHH
Q 014936 336 EGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVG----LKNWLRVTFA--VDPYSLEECLDRIKSFYQR 407 (415)
Q Consensus 336 ~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~----~~~~iRi~~~--~~~~~l~~~l~~l~~~~~~ 407 (415)
. +.++.+.++.. .+..++...+++ +||.+. +..|. ...++|++++ ++++++++++++|.++.++
T Consensus 320 ~-~~~~~i~~~~~-----~~~~~l~~~L~~-~gI~v~-~~~~~~~~~~~~~iRis~~~~~t~edi~~~~~~l~~~~~~ 389 (393)
T TIGR01822 320 D-HPIIPVMLYDA-----VLAQRFARRLLE-EGIYVT-GFFYPVVPKGQARIRVQISAAHTEEQLDRAVEAFTRIGRE 389 (393)
T ss_pred C-CCEEEEEeCCH-----HHHHHHHHHHHH-CCeeEe-eeCCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHHHHHH
Confidence 3 34554444321 135667777655 599987 44332 1246999884 6899999999999988764
No 113
>PRK10874 cysteine sulfinate desulfinase; Provisional
Probab=100.00 E-value=1.2e-31 Score=254.95 Aligned_cols=333 Identities=15% Similarity=0.170 Sum_probs=242.0
Q ss_pred cceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCC--CCCC------CCCcHHHHHHHHHHHhhhCCCCC-CCCcEEE
Q 014936 35 KKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFN--GYAP------TAGLPLTRRAIAEYLSRDLPYKL-TPNDVFV 105 (415)
Q Consensus 35 ~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~--~y~~------~~g~~~lr~~ia~~~~~~~~~~~-~~~~i~i 105 (415)
++.+.|+.+.. .+.++.+.+++.+.+...... .... ...+.++|+.+|+++ ++ ++++|++
T Consensus 18 ~~~~yld~a~~-----~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~------g~~~~~~i~~ 86 (401)
T PRK10874 18 DAGVYLDSAAT-----ALKPQAVIEATQQFYSLSAGNVHRSQFAAAQRLTARYEAAREQVAQLL------NAPDAKNIVW 86 (401)
T ss_pred CceEEEeCCcc-----cCCCHHHHHHHHHHHHhccCCCCCcccHHHHHHHHHHHHHHHHHHHHc------CCCCCCEEEE
Confidence 45688888863 345688999998887632110 0000 122567888888887 45 6889999
Q ss_pred eCChHHHHHHHHHHhc----CCCCEEEEcCCCCcc----hHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEE
Q 014936 106 TSGCTQAIDVAMALLS----RPGANILLPRPGFPI----YELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVAL 177 (415)
Q Consensus 106 ~~g~~~al~~~~~~l~----~~gd~vi~~~p~y~~----~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v 177 (415)
++|++++++.++.++. ++||+|++++++|++ +...++..|++++.++.+. ++.+|++++++.++++++++
T Consensus 87 ~~~~t~~i~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~--~~~~d~~~l~~~i~~~t~lv 164 (401)
T PRK10874 87 TRGTTESINLVAQSYARPRLQPGDEIIVSEAEHHANLVPWLMVAQQTGAKVVKLPLGA--DRLPDVDLLPELITPRTRIL 164 (401)
T ss_pred ECCHHHHHHHHHHHhhhccCCCcCEEEECCcchHHHHHHHHHHHHHhCCEEEEEecCC--CCcCCHHHHHHhcCcCcEEE
Confidence 9999999999999983 789999999999975 4456678899999998743 45689999999999999999
Q ss_pred EecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEE
Q 014936 178 VIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWF 257 (415)
Q Consensus 178 ~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~ 257 (415)
++++|+||||.+++ +++|+++|+++|+++++|++|+...+. ..+..++. .+++.|++|.|+.+| +|++
T Consensus 165 ~i~~~~n~tG~~~~---~~~i~~l~~~~g~~~ivD~a~~~g~~~----~~~~~~~~---d~~~~s~~K~~gp~G--~G~l 232 (401)
T PRK10874 165 ALGQMSNVTGGCPD---LARAITLAHQAGMVVMVDGAQGAVHFP----ADVQALDI---DFYAFSGHKLYGPTG--IGVL 232 (401)
T ss_pred EEeCCcccccCcCC---HHHHHHHHHHcCCEEEEECCccccccc----CCchhcCC---CEEEEecccccCCCc--cEEE
Confidence 99999999999975 678888888999999999999753321 22333332 377889999988777 6998
Q ss_pred EeeCCCCCCChHHHHHHHHhhc----------------------cccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHH
Q 014936 258 VTTDPCGMFRKPKVVERMKKYF----------------------DILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQS 315 (415)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~----------------------~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~ 315 (415)
++++ ++++.+.... ...++++...+.++..+++...+...++..++.++.
T Consensus 233 ~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gt~~~~~~~al~~al~~l~~~g~~~~~~~~~~l 304 (401)
T PRK10874 233 YGKS--------ELLEAMSPWQGGGKMLTEVSFDGFTPQSAPWRFEAGTPNVAGVIGLSAALEWLADIDINQAESWSRSL 304 (401)
T ss_pred EEch--------HHHhcCCCeecCCcceEeeccCccCCCCChhhccCCCcCHHHHHHHHHHHHHHHHhCHHHHHHHHHHH
Confidence 8765 3444432111 112355656666666666543333455667888888
Q ss_pred HHHHHHHhhcCCCCcCCCCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCC--------CCCeEEEEe
Q 014936 316 VDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVG--------LKNWLRVTF 387 (415)
Q Consensus 316 ~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~--------~~~~iRi~~ 387 (415)
++++.+.|+++|++..+ .+..+.++++.++. .+..++.. .|.++||.+.+|..|. ..++||+|+
T Consensus 305 ~~~l~~~l~~~~g~~~~-~~~~~~i~~~~~~~------~~~~~~~~-~L~~~gI~v~~g~~~~~~~~~~~g~~~~iRiS~ 376 (401)
T PRK10874 305 ATLAEDALAKLPGFRSF-RCQDSSLLAFDFAG------VHHSDLVT-LLAEYGIALRAGQHCAQPLLAALGVTGTLRASF 376 (401)
T ss_pred HHHHHHHHhcCCCEEEe-CCCCCcEEEEEECC------cCHHHHHH-HHHHCCcEEeccccchHHHHHHhCCCCEEEEEe
Confidence 99999999998888743 34445556655642 13455554 4567899999988663 368999999
Q ss_pred e--CChhhHHHHHHHHHHHHHHH
Q 014936 388 A--VDPYSLEECLDRIKSFYQRH 408 (415)
Q Consensus 388 ~--~~~~~l~~~l~~l~~~~~~~ 408 (415)
+ ++++|++.+++.|+++++.+
T Consensus 377 ~~~nt~edid~ll~al~~~~~~~ 399 (401)
T PRK10874 377 APYNTQSDVDALVNAVDRALELL 399 (401)
T ss_pred cccCCHHHHHHHHHHHHHHHHHh
Confidence 5 68999999999999887653
No 114
>TIGR03392 FeS_syn_CsdA cysteine desulfurase, catalytic subunit CsdA. Members of this protein family are CsdS. This protein, found Escherichia coli, Yersinia pestis, Photorhabdus luminescens, and related species, and related to SufS, works together with and physically interacts with CsdE (a paralog of SufE). CsdA has cysteine desulfurase activity that is enhanced by CsdE, a sulfur acceptor protein. This gene pair, although involved in FeS cluster biosynthesis, is not found next to other such genes as are its paralogs from the Suf or Isc systems.
Probab=100.00 E-value=1.9e-31 Score=253.42 Aligned_cols=333 Identities=15% Similarity=0.169 Sum_probs=240.3
Q ss_pred cceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCC-CCCCC-------CCcHHHHHHHHHHHhhhCCCCC-CCCcEEE
Q 014936 35 KKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFN-GYAPT-------AGLPLTRRAIAEYLSRDLPYKL-TPNDVFV 105 (415)
Q Consensus 35 ~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~-~y~~~-------~g~~~lr~~ia~~~~~~~~~~~-~~~~i~i 105 (415)
++.+.|+.+.. .++++.+.+++.+.+...... .+... ..+.++|+.+++++ +. ++++|++
T Consensus 15 ~~~iyld~a~~-----~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~------g~~~~~~i~~ 83 (398)
T TIGR03392 15 DGTVYLDSAAT-----ALKPQAVIDATQQFYRLSSGTVHRSQHQQAQSLTARYELARQQVARFL------NAPDAENIVW 83 (398)
T ss_pred CCeEEeeCccc-----cCCCHHHHHHHHHHHHhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHh------CCCCCCeEEE
Confidence 45788888863 345688999998887532111 11111 22456889999988 34 4689999
Q ss_pred eCChHHHHHHHHHHh----cCCCCEEEEcCCCCcc----hHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEE
Q 014936 106 TSGCTQAIDVAMALL----SRPGANILLPRPGFPI----YELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVAL 177 (415)
Q Consensus 106 ~~g~~~al~~~~~~l----~~~gd~vi~~~p~y~~----~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v 177 (415)
|+|++++++.++.++ .++||+|++++|+|++ +...++..|++++.++.+. ++.+|++.++++++++++++
T Consensus 84 t~g~t~~l~~~~~~~~~~~~~~gd~Vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~--~~~~~~~~l~~~i~~~t~lv 161 (398)
T TIGR03392 84 TRGTTESINLVAQSYARPRLQPGDEIIVSEAEHHANLIPWLMVAQQTGAKVVKLPIGA--DLLPDIRQLPELLTPRTRIL 161 (398)
T ss_pred eCChHHHHHHHHHHhhhccCCCCCEEEECCcchhHHHHHHHHHHHHcCcEEEEEecCC--CCCcCHHHHHHHhccCceEE
Confidence 999999999999987 4789999999999976 3455678899999998753 35689999999999899999
Q ss_pred EecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEE
Q 014936 178 VIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWF 257 (415)
Q Consensus 178 ~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~ 257 (415)
++++|+||||.+++ +++|+++|+++|+++++|++|+.+.+ ...+...+. .+++.|++|.++.+| +||+
T Consensus 162 ~i~~~~n~tG~~~~---~~~i~~~~~~~~~~~ivD~a~~~~~~----~~~~~~~~~---d~~~~s~~K~~gp~G--~G~l 229 (398)
T TIGR03392 162 ALGQMSNVTGGCPD---LARAITLAHQYGAVVVVDGAQGVVHG----PPDVQALDI---DFYAFSGHKLYGPTG--IGVL 229 (398)
T ss_pred EEECccccccccCC---HHHHHHHHHHcCCEEEEEhhhhcCCC----CCChhhcCC---CEEEEecccccCCCc--eEEE
Confidence 99999999999965 67788888999999999999976332 122333332 277788899887666 8999
Q ss_pred EeeCCCCCCChHHHHHHHHhhc----------------------cccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHH
Q 014936 258 VTTDPCGMFRKPKVVERMKKYF----------------------DILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQS 315 (415)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~----------------------~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~ 315 (415)
+.++ ++++.+.... .-.++++.....++.++++...+..+++..++.++.
T Consensus 230 ~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~GT~~~~~~~a~~~al~~l~~~g~~~i~~~~~~l 301 (398)
T TIGR03392 230 YGKT--------ELLEAMPPWQGGGKMLSHVSFDGFIPQAVPHRFEAGTPNIAGVIGLSAALEWLTDIDIAAAEAWSVSL 301 (398)
T ss_pred EEcH--------HHHhhCCCeecCCceEeeccccccccCCChhhccCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHH
Confidence 8865 3444332110 012345555555665555432233456677888889
Q ss_pred HHHHHHHhhcCCCCcCCCCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCC--------CCCeEEEEe
Q 014936 316 VDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVG--------LKNWLRVTF 387 (415)
Q Consensus 316 ~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~--------~~~~iRi~~ 387 (415)
++++.+.|++++++..+ .+..+.++++.++. .+..++...| .++||.+.+|..|. .+++||+|+
T Consensus 302 ~~~l~~~l~~l~g~~~~-~~~~~~i~~~~~~~------~~~~~l~~~L-~~~gI~v~~g~~~~~~~~~~~g~~~~iRvS~ 373 (398)
T TIGR03392 302 ADLAEERLAQLPGFRSF-RCPGSSLLAFDFAG------VHHSDLAALL-AESGIALRAGQHCAQPLMAALGVSGTLRASF 373 (398)
T ss_pred HHHHHHHHhcCCCeEEe-CCCCCcEEEEEeCC------cCHHHHHHHH-HhCCEEEecCccchHHHHHHhCCCCEEEEEe
Confidence 99999999988887733 33334456555542 1355666554 67899999998763 357999999
Q ss_pred e--CChhhHHHHHHHHHHHHHHH
Q 014936 388 A--VDPYSLEECLDRIKSFYQRH 408 (415)
Q Consensus 388 ~--~~~~~l~~~l~~l~~~~~~~ 408 (415)
+ ++++|++.+++.|+++++++
T Consensus 374 ~~~~t~~ei~~l~~~l~~~~~~~ 396 (398)
T TIGR03392 374 APYNTQQDVDALVDAVGAALELL 396 (398)
T ss_pred eccCCHHHHHHHHHHHHHHHHHh
Confidence 5 68999999999999887753
No 115
>TIGR00858 bioF 8-amino-7-oxononanoate synthase. This model represents 8-amino-7-oxononanoate synthase, the BioF protein of biotin biosynthesis. This model is based on a careful phylogenetic analysis to separate members of this family from 2-amino-3-ketobutyrate and other related pyridoxal phosphate-dependent enzymes. In several species, including Staphylococcus and Coxiella, a candidate 8-amino-7-oxononanoate synthase is confirmed by location in the midst of a biotin biosynthesis operon but scores below the trusted cutoff of this model.
Probab=100.00 E-value=1.3e-31 Score=251.79 Aligned_cols=328 Identities=13% Similarity=0.127 Sum_probs=235.2
Q ss_pred ccCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCC--CCC----CCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEE
Q 014936 32 KNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKF--NGY----APTAGLPLTRRAIAEYLSRDLPYKLTPNDVFV 105 (415)
Q Consensus 32 ~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~--~~y----~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i 105 (415)
.+++.++||+.|+| .+++.++.+++++.+.+..... ..| +......++++.++++++ .++.+++
T Consensus 13 ~~g~~~id~~~~~~---~g~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~~-------~~~~i~~ 82 (360)
T TIGR00858 13 RDGRRLLNFSSNDY---LGLASHPEVIQAAQQGAEQYGAGSTASRLVSGNSPLHEELEEELAEWKG-------TEAALLF 82 (360)
T ss_pred ECCceEEecccCCc---ccCCCCHHHHHHHHHHHHhcCCCCCCcCcccCCcHHHHHHHHHHHHHhC-------CCCEEEE
Confidence 45889999999964 2355678999999998764111 112 222234567777777763 3567777
Q ss_pred eCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCC----CceEEEecC
Q 014936 106 TSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ----NTVALVIIN 181 (415)
Q Consensus 106 ~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~----~~~~v~i~~ 181 (415)
++|+ +++..++.+++++||+|+++.|+|..+...++..|.++..++. +|++.+++.+++ +++++++.+
T Consensus 83 ~~G~-~~~~~~l~~~~~~gd~v~~~~~~~~~~~~~~~~~g~~~~~~~~-------~d~~~l~~~~~~~~~~~~~~v~~~~ 154 (360)
T TIGR00858 83 SSGY-LANVGVISALVGKGDLILSDALNHASLIDGCRLSGARVRRYRH-------NDVEHLERLLEKNRGERRKLIVTDG 154 (360)
T ss_pred CchH-HHHHHHHHHhCCCCCEEEEEccccHHHHHHHHhcCCceEEecC-------CCHHHHHHHHHHcccCCCeEEEEeC
Confidence 7775 4455577888899999999999999999999999998887653 578888887754 467778888
Q ss_pred CCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCc--ccccccCCCCCeEEEccCccccCCCCceEEEEEe
Q 014936 182 PGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPF--VPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVT 259 (415)
Q Consensus 182 p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~--~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~ 259 (415)
++||||.. .++++|.++|+++|+++|+||+|+.+.++.... .....+..++++++++|+||+|+++| ||+++
T Consensus 155 ~~~~~G~~---~~~~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~g---G~~~~ 228 (360)
T TIGR00858 155 VFSMDGDI---APLPQLVALAERYGAWLMVDDAHGTGVLGEDGRGTLEHFGLKPEPVDIQVGTLSKALGSYG---AYVAG 228 (360)
T ss_pred CccCCCCC---cCHHHHHHHHHHcCcEEEEECcccccCcCCCCCchHHhcCCCccCCcEEEEechhhhhccC---cEEEc
Confidence 89999988 457888889999999999999998765543221 22222334467899999999998877 99987
Q ss_pred eCCCCCCChHHHHHHHHhhcc---ccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCC
Q 014936 260 TDPCGMFRKPKVVERMKKYFD---ILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPE 336 (415)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~ 336 (415)
++ ++.+.+..... .+...++..+.++.++++.. ...++.+++++++++++.+.|+++ ++. + .+.
T Consensus 229 ~~--------~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~--~~~~~~~~~~~~~~~~l~~~L~~~-~~~-~-~~~ 295 (360)
T TIGR00858 229 SQ--------ALIDYLINRARTLIFSTALPPAVAAAALAALELI--QEEPWRREKLLALIARLRAGLEAL-GFT-L-MPS 295 (360)
T ss_pred CH--------HHHHHHHHhCccceecCCCCHHHHHHHHHHHHHH--hhCHHHHHHHHHHHHHHHHHHHHc-CCc-c-CCC
Confidence 54 56666654321 12334555555666666432 223567889999999999999987 666 4 456
Q ss_pred CceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCC---CCeEEEEee--CChhhHHHHHHHHH
Q 014936 337 GSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGL---KNWLRVTFA--VDPYSLEECLDRIK 402 (415)
Q Consensus 337 ~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~---~~~iRi~~~--~~~~~l~~~l~~l~ 402 (415)
.++++|+.++.. .+..++...+ .++||.+.++..++. .+++|++++ .++++++.++++|+
T Consensus 296 ~~~~~~~~~~~~-----~~~~~~~~~l-~~~gI~v~~~~~~~~~~~~~~iRis~~~~~~~~~i~~~l~~l~ 360 (360)
T TIGR00858 296 CTPIVPVIIGDN-----ASALALAEEL-QQQGIFVGAIRPPTVPAGTSRLRLTLSAAHTPGDIDRLAEALK 360 (360)
T ss_pred CCCEEEEEeCCH-----HHHHHHHHHH-HHCCeeEeeeCCCCCCCCCceEEEEEcCCCCHHHHHHHHHhhC
Confidence 678899887531 1345666666 567999998765532 358999996 58999999998863
No 116
>PRK06939 2-amino-3-ketobutyrate coenzyme A ligase; Provisional
Probab=100.00 E-value=2.9e-31 Score=252.70 Aligned_cols=337 Identities=15% Similarity=0.101 Sum_probs=238.6
Q ss_pred cCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCC--CCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChH
Q 014936 33 NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKF--NGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCT 110 (415)
Q Consensus 33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~--~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~ 110 (415)
.+++++||+.|++ +++++++.+.+++.+.+..... ..|....|..++++.+++++.+.+| .+++|++|+| +
T Consensus 40 ~g~~~i~l~~~~~---~~~~~~~~i~~a~~~~~~~~~~~~~~~~~~~G~~~l~~~l~~~la~~~g---~~~~i~~tsG-~ 112 (397)
T PRK06939 40 DGKEVINFCANNY---LGLANHPELIAAAKAALDSHGFGMASVRFICGTQDLHKELEEKLAKFLG---TEDAILYSSC-F 112 (397)
T ss_pred CCCeEEEeeccCc---cccCCCHHHHHHHHHHHHHcCCCCcccccccCCcHHHHHHHHHHHHHhC---CCcEEEEcCh-H
Confidence 5778999999873 3477889999999998865322 1223346888889888888888777 2367778777 7
Q ss_pred HHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCC------CceEEEecCCCC
Q 014936 111 QAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ------NTVALVIINPGN 184 (415)
Q Consensus 111 ~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~------~~~~v~i~~p~n 184 (415)
+++..++.+++++||.|++++|+|+.+...++..|.++..++. .|++++++.+++ ++++++..+.+|
T Consensus 113 ~a~~~~~~~l~~~gd~vi~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~~i~~~~~~~~~~~~v~~~~v~~ 185 (397)
T PRK06939 113 DANGGLFETLLGKEDAIISDALNHASIIDGVRLCKAKRYRYAN-------NDMADLEAQLKEAKEAGARHKLIATDGVFS 185 (397)
T ss_pred HHHHHHHHHhCCCCCEEEEEhhhhHHHHHHHHhcCCceEEeCC-------CCHHHHHHHHHhhhccCCCCeEEEEecCcC
Confidence 7888999999999999999999999999999989988877653 477888777653 566666666789
Q ss_pred ccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccC--CCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCC
Q 014936 185 PCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFG--DKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDP 262 (415)
Q Consensus 185 ptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~--~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~ 262 (415)
++|.. +++++|+++|+++|+++|+||+|+...+. +........+. .+.+++++|+||++ +|+|+||+++++
T Consensus 186 ~~G~~---~~~~~l~~la~~~~~~li~De~~~~g~~~~~~~~~~~~~~~~-~~~~i~~~S~sK~~--~g~r~G~v~~~~- 258 (397)
T PRK06939 186 MDGDI---APLPEICDLADKYDALVMVDDSHAVGFVGENGRGTVEHFGVM-DRVDIITGTLGKAL--GGASGGYTAGRK- 258 (397)
T ss_pred CCCCc---CCHHHHHHHHHHhCCEEEEECcccccCcCCCCCCHHHHcCCC-CCCcEEEEECHHHh--CccCceEEEeCH-
Confidence 99986 67899999999999999999999643322 21111111221 12458999999996 356899999865
Q ss_pred CCCCChHHHHHHHHhhcc---ccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCce
Q 014936 263 CGMFRKPKVVERMKKYFD---ILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSM 339 (415)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~ 339 (415)
++++.+..... ...+.++..+.++.++++.. ...++.+++++++++.+.+.|+.+ ++. ...+.++
T Consensus 259 -------~~~~~l~~~~~~~~~~~~~~~~~~~a~~~al~~~--~~~~~~~~~~~~~~~~l~~~L~~~-~~~-~~~~~~~- 326 (397)
T PRK06939 259 -------EVIDWLRQRSRPYLFSNSLAPAIVAASIKVLELL--EESDELRDRLWENARYFREGMTAA-GFT-LGPGEHP- 326 (397)
T ss_pred -------HHHHHHHHhCccccccCCCCHHHHHHHHHHHHHH--hcCHHHHHHHHHHHHHHHHHHHHc-CCC-cCCCCCC-
Confidence 57777765321 12233444455555555321 113467788999999999999987 666 3244444
Q ss_pred EEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCC---CCeEEEEee--CChhhHHHHHHHHHHHHHHH
Q 014936 340 AVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGL---KNWLRVTFA--VDPYSLEECLDRIKSFYQRH 408 (415)
Q Consensus 340 ~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~---~~~iRi~~~--~~~~~l~~~l~~l~~~~~~~ 408 (415)
++++.++.. .+..++...++++ ||.+.++.++.. .+++|++++ .+++++++++++|++++++.
T Consensus 327 ~~~~~~~~~-----~~~~~~~~~L~~~-gI~v~~~~~~~~~~~~~~iRi~~~~~~~~~~i~~~l~~L~~~~~~~ 394 (397)
T PRK06939 327 IIPVMLGDA-----KLAQEFADRLLEE-GVYVIGFSFPVVPKGQARIRTQMSAAHTKEQLDRAIDAFEKVGKEL 394 (397)
T ss_pred EEEEEECCH-----HHHHHHHHHHHHC-CceEeeeCCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHHHHHHh
Confidence 444334321 1356777777655 999986543221 368999984 68999999999999888653
No 117
>PRK13392 5-aminolevulinate synthase; Provisional
Probab=100.00 E-value=4.8e-31 Score=251.23 Aligned_cols=332 Identities=16% Similarity=0.152 Sum_probs=231.6
Q ss_pred CcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCC------CCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeC
Q 014936 34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKF------NGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTS 107 (415)
Q Consensus 34 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~------~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~ 107 (415)
+++.++|++++ +.+++++|.+++++.+.+..... ..|+......+|++.+|+++ + .++.+++++
T Consensus 45 ~~~~~~~~sn~---yl~l~~~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~Le~~la~~~------g-~~~~i~~~s 114 (410)
T PRK13392 45 PRRVTIWCSND---YLGMGQHPDVIGAMVDALDRYGAGAGGTRNISGTSHPHVLLERELADLH------G-KESALLFTS 114 (410)
T ss_pred CceEEEEECCC---ccCCCCCHHHHHHHHHHHHHcCCCCchhhhcccChHHHHHHHHHHHHHh------C-CCCEEEECc
Confidence 35688999887 45678899999999998764211 12333334678999999988 3 245555555
Q ss_pred ChHHHHHHHHHHhcC--CCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhc----CCCceEEEecC
Q 014936 108 GCTQAIDVAMALLSR--PGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLA----DQNTVALVIIN 181 (415)
Q Consensus 108 g~~~al~~~~~~l~~--~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~----~~~~~~v~i~~ 181 (415)
| ++++..++..+.. +|+.|+++.+.|..+...++..|.++..++.+ |.+.+++.+ .+++++|++++
T Consensus 115 G-~~a~~~~i~~l~~~~~g~~vi~~~~~h~s~~~~~~~~g~~~~~~~~~-------d~~~l~~~l~~~~~~~t~~v~i~~ 186 (410)
T PRK13392 115 G-YVSNDAALSTLGKLLPGCVILSDALNHASMIEGIRRSGAEKQVFRHN-------DLADLEEQLASVDPDRPKLIAFES 186 (410)
T ss_pred H-HHHHHHHHHHHhcCCCCCEEEEehhhhHHHHHHHHHcCCeEEEEeCC-------CHHHHHHHHHhccCCCCEEEEEeC
Confidence 5 6777778876653 78999888888888888888889888776531 334444333 34788999999
Q ss_pred CCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCC-eEEEccCccccCCCCceEEEEEee
Q 014936 182 PGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVP-ILTLGSLSKRWIVPGWRLGWFVTT 260 (415)
Q Consensus 182 p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~-~i~~~s~sK~~~~~G~r~G~~~~~ 260 (415)
|+||||.+++ +++|.++|+++|+++|+||+|+.+.++..+.......+..++ .++++|+||+|+++| ||++++
T Consensus 187 ~~n~tG~~~~---l~~i~~l~~~~~~~livDea~~~g~~g~~g~g~~~~~~~~~~~div~~tlsK~~g~~G---G~~~~~ 260 (410)
T PRK13392 187 VYSMDGDIAP---IEAICDLADRYNALTYVDEVHAVGLYGARGGGIAERDGLMDRIDMIQGTLAKAFGCLG---GYIAAS 260 (410)
T ss_pred CCCCCccccc---HHHHHHHHHHcCCEEEEECCccccCcCCCCCchhhhccCCCCCcEEEEEChHhhhccc---chhhcC
Confidence 9999999976 778888888999999999999965543222111111111122 378899999999888 999875
Q ss_pred CCCCCCChHHHHHHHHhhcc---ccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCC
Q 014936 261 DPCGMFRKPKVVERMKKYFD---ILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEG 337 (415)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~ 337 (415)
+ ++++.++.... .+...+++.+.++.++|+.. ......+++++++++++.+.|+++ ++. + .+..
T Consensus 261 ~--------~~~~~l~~~~~~~~~s~~~~~~~~~a~~aaL~~~--~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~-~~~~ 327 (410)
T PRK13392 261 A--------DLIDFVRSFAPGFIFTTALPPAVAAGATAAIRHL--KTSQTERDAHQDRVAALKAKLNAN-GIP-V-MPSP 327 (410)
T ss_pred H--------HHHHHHHHhCcchhccCcCCHHHHHHHHHHHHHH--hcCHHHHHHHHHHHHHHHHHHHHc-CCC-C-CCCC
Confidence 4 57776665432 23345667788777777642 223345577889999999999987 777 4 3444
Q ss_pred ceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCC---CCeEEEEe--eCChhhHHHHHHHHHHHHHH
Q 014936 338 SMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGL---KNWLRVTF--AVDPYSLEECLDRIKSFYQR 407 (415)
Q Consensus 338 g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~---~~~iRi~~--~~~~~~l~~~l~~l~~~~~~ 407 (415)
+.++.+.++.. .+..++...|++++||.+.++..+.. ..++|+++ ..++++++.+++.|.++.++
T Consensus 328 ~~~~~i~~~~~-----~~~~~~~~~L~~~~GI~v~~~~~p~~~~~~~~lRis~~~~~t~edid~l~~aL~~~~~~ 397 (410)
T PRK13392 328 SHIVPVMVGDP-----TLCKAISDRLMSEHGIYIQPINYPTVPRGTERLRITPTPLHDDEDIDALVAALVAIWDR 397 (410)
T ss_pred CCEEEEEeCCH-----HHHHHHHHHHHHhCCEEEeeeCCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHHHHHH
Confidence 55554444321 12456777776678999998765433 36899999 47899999999999988764
No 118
>PLN02483 serine palmitoyltransferase
Probab=100.00 E-value=9.7e-31 Score=251.72 Aligned_cols=337 Identities=12% Similarity=0.100 Sum_probs=233.8
Q ss_pred cCcceeEecccCCCCCCCCC-Cc----HHHHHHHHHHHhc--CCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEE
Q 014936 33 NEKKVISLAMGDPTVHSCFH-TT----HVATEAVAEALLS--EKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFV 105 (415)
Q Consensus 33 ~~~~~i~l~~g~~~~~~~~~-~~----~~~~~a~~~~~~~--~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i 105 (415)
...+.+||++.+ +.++. ++ +.+.+++.+.-.. +....|+...++.++++.+|++++ .++.+++
T Consensus 98 ~~~~~~n~~s~~---YLgl~~~~~~~~~~~~~ai~~~g~~~~~sr~~~g~~~~~~ele~~lA~~~g-------~~~ai~~ 167 (489)
T PLN02483 98 KTRRCLNLGSYN---YLGFAAADEYCTPRVIESLKKYSASTCSSRVDGGTTKLHRELEELVARFVG-------KPAAIVF 167 (489)
T ss_pred CCceEEEeecCC---ccCcCCCCHHHHHHHHHHHHHhCCCCCccccccCCcHHHHHHHHHHHHHhC-------CCcEEEE
Confidence 467789999998 54554 23 4555555554322 122347777889999999999984 3566666
Q ss_pred eCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcC-------CC-----
Q 014936 106 TSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLAD-------QN----- 173 (415)
Q Consensus 106 ~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~-------~~----- 173 (415)
++| +.++..++.+++++||.|++++|+|.++...++..|++++.++++ |++++++.++ ++
T Consensus 168 ~~G-~~an~~~i~al~~~Gd~Vi~d~~~h~s~~~~~~~~Ga~v~~~~~~-------d~~~le~~l~~~i~~~~p~t~~p~ 239 (489)
T PLN02483 168 GMG-YATNSTIIPALIGKGGLIISDSLNHNSIVNGARGSGATIRVFQHN-------TPSHLEEVLREQIAEGQPRTHRPW 239 (489)
T ss_pred CCH-HHHHHHHHHHhCCCCCEEEEcchhhHHHHHHHHHcCCeEEEEeCC-------CHHHHHHHHHhhhhccccccccCC
Confidence 665 556667888899999999999999999999999999999998863 3455544332 22
Q ss_pred ceEEEecCC-CCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccC--CCCcccccccCCCCCeEEEccCccccCCC
Q 014936 174 TVALVIINP-GNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFG--DKPFVPMGVFGSTVPILTLGSLSKRWIVP 250 (415)
Q Consensus 174 ~~~v~i~~p-~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~--~~~~~~~~~~~~~~~~i~~~s~sK~~~~~ 250 (415)
++.++++++ .|++|.+ .++++|+++|+++|+++|+||+|+....+ |.+..+....+..+..|+++||||+|++.
T Consensus 240 ~k~livve~v~s~~G~~---~~l~~I~~la~~~~~~livDEa~s~g~~G~~G~g~~~~~~v~~~~~dI~~~SfSKs~g~~ 316 (489)
T PLN02483 240 KKIIVIVEGIYSMEGEL---CKLPEIVAVCKKYKAYVYLDEAHSIGAVGKTGRGVCELLGVDPADVDIMMGTFTKSFGSC 316 (489)
T ss_pred ceEEEEECCCCCCCCcc---cCHHHHHHHHHHcCCEEEEECcCccCccCCCCCchHHhcCCCcccCcEEEEecchhcccC
Confidence 255666665 5899998 56889999999999999999999865443 22222333333345679999999999888
Q ss_pred CceEEEEEeeCCCCCCChHHHHHHHHhhcc---ccCCchhHHHHHHHHhhC----CCcHHHHHHHHHHHHHHHHHHHHHh
Q 014936 251 GWRLGWFVTTDPCGMFRKPKVVERMKKYFD---ILGDPATFIQAAVPSILQ----QPDEVFFKKTLNLLKQSVDICYNKI 323 (415)
Q Consensus 251 G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~a~~~~l~----~~~~~~~~~~~~~~~~~~~~l~~~l 323 (415)
| ||+++++ ++++.++.... .....++....++.+.|+ ....+...+++++++++++++.+.|
T Consensus 317 G---G~i~~~~--------~li~~l~~~~~~~~~~~~~~p~~~~~~~aaL~~l~~~~g~~~~~~~~~~l~~~~~~l~~~L 385 (489)
T PLN02483 317 G---GYIAGSK--------ELIQYLKRTCPAHLYATSMSPPAVQQVISAIKVILGEDGTNRGAQKLAQIRENSNFFRSEL 385 (489)
T ss_pred c---eEEEcCH--------HHHHHHHHhCccccccCCcCHHHHHHHHHHHHHHHhCccccchHHHHHHHHHHHHHHHHHH
Confidence 7 9998764 68888876522 122223333333444442 1112344566789999999999999
Q ss_pred hcCCCCcCCCCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCC---CCeEEEEee--CChhhHHHHH
Q 014936 324 KEIPCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGL---KNWLRVTFA--VDPYSLEECL 398 (415)
Q Consensus 324 ~~~~~~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~---~~~iRi~~~--~~~~~l~~~l 398 (415)
+++ ++. +..+.++..+|+.+... .+..++...+++ +||.+.|..++.. .+.+|++++ ++++++++++
T Consensus 386 ~~~-G~~-v~~~~~sp~~~l~l~~~-----~~~~~~~~~Ll~-~GI~v~~~~fp~~p~~~~~vRi~isa~~t~edId~~l 457 (489)
T PLN02483 386 QKM-GFE-VLGDNDSPVMPIMLYNP-----AKIPAFSRECLK-QNVAVVVVGFPATPLLLARARICISASHSREDLIKAL 457 (489)
T ss_pred HHC-CCc-ccCCCCCCEEEEEECCH-----HHHHHHHHHHHH-CCcEEeeeCCCCCCCCCceEEEEeCCCCCHHHHHHHH
Confidence 998 776 43455566666655321 124467777764 6999997433222 368999994 6899999999
Q ss_pred HHHHHHHHHHH
Q 014936 399 DRIKSFYQRHA 409 (415)
Q Consensus 399 ~~l~~~~~~~~ 409 (415)
++|+++.+.+.
T Consensus 458 ~~L~~~~~~~~ 468 (489)
T PLN02483 458 EVISEVGDLVG 468 (489)
T ss_pred HHHHHHHHHhC
Confidence 99999887654
No 119
>TIGR01825 gly_Cac_T_rel pyridoxal phosphate-dependent acyltransferase, putative. This model represents an enzyme subfamily related to three known enzymes; it appears closest to glycine C-acteyltransferase, shows no overlap with it in species distribution, and may share that function. The three closely related enzymes are glycine C-acetyltransferase (2-amino-3-ketobutyrate coenzyme A ligase), 5-aminolevulinic acid synthase, and 8-amino-7-oxononanoate synthase. All transfer the R-group (acetyl, succinyl, or 6-carboxyhexanoyl) from coenzyme A to an amino acid (Gly, Gly, Ala, respectively), with release of CO2 for the latter two reactions.
Probab=100.00 E-value=2e-30 Score=245.75 Aligned_cols=335 Identities=16% Similarity=0.148 Sum_probs=240.3
Q ss_pred cCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcC--CCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChH
Q 014936 33 NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSE--KFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCT 110 (415)
Q Consensus 33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~--~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~ 110 (415)
++++++||+.+++ +++++++.+++++.+++... ....|....|..++++.+++++.+..| .++.+++++| +
T Consensus 31 ~g~~~id~~~~~~---~g~~~~~~~~~a~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~l~~~~g---~~~~i~~~sG-~ 103 (385)
T TIGR01825 31 NGKEVINLSSNNY---LGFADHPRLKEAAAQAIQQYGVGAGAVRTIAGTLRLHEELEEKLAKFKK---TEAALVFQSG-F 103 (385)
T ss_pred CCceEEEeeccCc---cCCCCCHHHHHHHHHHHHHcCCCCCccCcccCCcHHHHHHHHHHHHHhC---CCcEEEECcH-H
Confidence 4789999999863 34778899999999987642 234577778999999999999988777 3456777777 5
Q ss_pred HHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCC----CceEEEecCCCCcc
Q 014936 111 QAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ----NTVALVIINPGNPC 186 (415)
Q Consensus 111 ~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~----~~~~v~i~~p~npt 186 (415)
+++..++.+++++||.|+++.|+|..+...+...|.++..++ .+|++++++.+++ +++++++.+++|||
T Consensus 104 ~a~~~a~~~~~~~gd~vi~~~~~~~~~~~~~~~~g~~~~~~~-------~~d~~~l~~~l~~~~~~~~~~v~~~~v~~~t 176 (385)
T TIGR01825 104 NTNQGVLSALLRKGDIVLSDELNHASIIDGLRLTKATKKIYK-------HADMDDLDRVLRENPSYGKKLIVTDGVFSMD 176 (385)
T ss_pred HHHHHHHHHhCCCCCEEEEEccccHHHHHHHHhcCCceEEeC-------CCCHHHHHHHHHhhccCCCeEEEEecCCcCC
Confidence 667788888999999999999999998888788888776553 2677888776543 57778888889999
Q ss_pred ccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccc--cccCCCCCeEEEccCccccCCCCceEEEEEeeCCCC
Q 014936 187 GNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPM--GVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCG 264 (415)
Q Consensus 187 G~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~--~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~ 264 (415)
|.+.+ +++|.++|++||+++|+||+|+.+.++....... .... .+.++++.||||+|+++| ||+++++
T Consensus 177 G~~~~---~~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~~~~g---G~~~~~~--- 246 (385)
T TIGR01825 177 GDVAP---LPEIVELAERYGAVTYVDDAHGSGVMGEAGRGTVHHFGLE-DKVDIQVGTLSKAIGVVG---GYAAGHK--- 246 (385)
T ss_pred CCccC---HHHHHHHHHHhCCEEEEECcccccCcCCCCCccHhhcCCC-cCCcEEEEeccHHhhcCC---CEEecCH---
Confidence 99855 7888999999999999999998766542211111 1222 346799999999987766 9988754
Q ss_pred CCChHHHHHHHHhhcc---ccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEE
Q 014936 265 MFRKPKVVERMKKYFD---ILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAV 341 (415)
Q Consensus 265 ~~~~~~~~~~~~~~~~---~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~ 341 (415)
++++.+..... .+...++..+.++.++++... + ..+..++++++++++.+.|+++ ++. +..|.+. ++
T Consensus 247 -----~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~-~-~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~~~~-~~ 316 (385)
T TIGR01825 247 -----ELIEYLKNRARPFLFSTAQPPAVVAALAAAVDELQ-R-SPELMERLWDNTRFFKAGLGKL-GYD-TGGSETP-IT 316 (385)
T ss_pred -----HHHHHHHHhCccccccCCCCHHHHHHHHHHHHHHh-c-CHHHHHHHHHHHHHHHHHHHHc-CCC-CCCCCCC-EE
Confidence 57777654421 122345666777777765321 1 1245677788899999999887 777 4345444 45
Q ss_pred EEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCC---CCeEEEEe--eCChhhHHHHHHHHHHHHHH
Q 014936 342 MLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGL---KNWLRVTF--AVDPYSLEECLDRIKSFYQR 407 (415)
Q Consensus 342 ~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~---~~~iRi~~--~~~~~~l~~~l~~l~~~~~~ 407 (415)
++.++.. .+..++...++++ ||.+.++..+.. ..++|+++ ..+++++++++++|++++++
T Consensus 317 ~~~~~~~-----~~~~~~~~~L~~~-gi~v~~~~~~~~~~~~~~iRi~~~~~~~~e~i~~~~~~l~~~~~~ 381 (385)
T TIGR01825 317 PVVIGDE-----KAAQEFSRRLFDE-GIFAQSIVFPTVPRGTARIRNIPTAEHTKDDLDQALDAYEKVGKE 381 (385)
T ss_pred EEEECCH-----HHHHHHHHHHHHC-CcEEcccCCCCCCCCCceEEEEEcCCCCHHHHHHHHHHHHHHHHH
Confidence 4444321 1345677777665 999854333221 36899987 47999999999999998864
No 120
>TIGR01979 sufS cysteine desulfurases, SufS subfamily. This model represents a subfamily of NifS-related cysteine desulfurases involved in FeS cluster formation needed for nitrogen fixation among other vital functions. Many cysteine desulfurases are also active as selenocysteine lyase and/or cysteine sulfinate desulfinase. This subfamily is associated with the six-gene SUF system described in E. coli and Erwinia as an FeS cluster formation system during oxidative stress. The active site Cys is this subfamily resembles GHHC with one or both His conserved.
Probab=100.00 E-value=3.6e-30 Score=245.24 Aligned_cols=334 Identities=16% Similarity=0.210 Sum_probs=239.4
Q ss_pred CcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCC----CC----CCCCcHHHHHHHHHHHhhhCCCCCC-CCcEE
Q 014936 34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNG----YA----PTAGLPLTRRAIAEYLSRDLPYKLT-PNDVF 104 (415)
Q Consensus 34 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~----y~----~~~g~~~lr~~ia~~~~~~~~~~~~-~~~i~ 104 (415)
+++++.|+.+.. .++++.+.+++.+.+....... +. ......++|+.+++++ +.+ +++|+
T Consensus 16 ~~~~~yld~~~~-----~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ia~~~------~~~~~~~v~ 84 (403)
T TIGR01979 16 GKPLVYLDSAAT-----SQKPQQVIDAVAEYYRNSNANVHRGIHTLSVRATEAYEAVREKVAKFI------NAASDEEIV 84 (403)
T ss_pred CCceEEEeCccc-----cCCCHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHHHHHHHHHHh------CcCCCCeEE
Confidence 567899999973 2456889999988765321110 10 0124568889999988 345 67999
Q ss_pred EeCChHHHHHHHHHHh----cCCCCEEEEcCCCCcch----HHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceE
Q 014936 105 VTSGCTQAIDVAMALL----SRPGANILLPRPGFPIY----ELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVA 176 (415)
Q Consensus 105 i~~g~~~al~~~~~~l----~~~gd~vi~~~p~y~~~----~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 176 (415)
+++|+++++.+++.++ .++||+|+++++.|++. ...++..|+++..++.+ .++.++++.+++.+++++++
T Consensus 85 ~~~g~t~~l~~~~~~~~~~~~~~g~~vl~~~~~~~s~~~~~~~~~~~~g~~~~~v~~~--~~~~~~~~~l~~~i~~~~~l 162 (403)
T TIGR01979 85 FTRGTTESINLVAYSWGDSNLKAGDEIVISEMEHHANIVPWQLLAERTGATLKFIPLD--DDGTLDLDDLEKLLTEKTKL 162 (403)
T ss_pred EeCCHHHHHHHHHHHhhhhcCCCCCEEEECcchhhHHHHHHHHHHHhcCcEEEEEecC--CCCCCCHHHHHHHhccCCeE
Confidence 9999999999998875 47899999999988763 34556789999999875 33568999999999989999
Q ss_pred EEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEE
Q 014936 177 LVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGW 256 (415)
Q Consensus 177 v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~ 256 (415)
+++++|+||||..+| +++|+++|+++|+++++|++|+.+. ....+..++. .+++.|++|.++.+| +|+
T Consensus 163 v~~~~~~~~tG~~~~---~~~i~~~~~~~~~~~ivD~a~~~g~----~~~~~~~~~~---d~~~~s~~K~~gp~G--~g~ 230 (403)
T TIGR01979 163 VAITHVSNVLGTVNP---VEEIAKLAHQVGAKVLVDGAQAVPH----MPVDVQALDC---DFYVFSGHKMYGPTG--IGV 230 (403)
T ss_pred EEEEcccccccccCC---HHHHHHHHHHcCCEEEEEchhhcCc----cccCccccCC---CEEEEecccccCCCC--ceE
Confidence 999999999999977 6778888889999999999997632 2222333332 388889999887666 899
Q ss_pred EEeeCCCCCCChHHHHHHHHhh----------------------ccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHH
Q 014936 257 FVTTDPCGMFRKPKVVERMKKY----------------------FDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQ 314 (415)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~----------------------~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~ 314 (415)
+++++ ++.+.+... ....++++.....++..+++...+...++..++..+
T Consensus 231 l~~~~--------~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~~~~~g~~~~~~~~~~ 302 (403)
T TIGR01979 231 LYGKE--------ELLEQMPPFLGGGEMIAEVSFEETTYNEAPHKFEAGTPNIAGVIGLGAAIDYLEAIGLENIEAHEHE 302 (403)
T ss_pred EEEch--------HHHhcCCCeecCCCceeecccCccccCCChhhcCCCCccHHHHHHHHHHHHHHHHhCHHHHHHHHHH
Confidence 98864 333333211 001134555566666666643222335677888899
Q ss_pred HHHHHHHHhhcCCCCcCCCCCC----CceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCC--------CCCCCe
Q 014936 315 SVDICYNKIKEIPCISCPHKPE----GSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTA--------VGLKNW 382 (415)
Q Consensus 315 ~~~~l~~~l~~~~~~~~~~~p~----~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~--------~~~~~~ 382 (415)
.++.+.+.|+.+++++++ .|. .+.++.+.++. .+..++. ..|+++||.+.+|.. ++.+++
T Consensus 303 l~~~l~~~l~~~~g~~~~-~~~~~~~~~~~v~~~~~~------~~~~~~~-~~L~~~gI~v~~g~~~~~~~~~~~~~~~~ 374 (403)
T TIGR01979 303 LTAYALERLGEIPGLRIY-GPRDAEDRGGIISFNVEG------VHPHDVG-TILDEEGIAVRSGHHCAQPLMRRFGVPAT 374 (403)
T ss_pred HHHHHHHHHhcCCCEEEe-CCCCccccCceEEEEeCC------cCHHHHH-HHHhhCCEEEcchhhhhHHHHHHhCCCCE
Confidence 999999999988888743 443 14455555642 1344554 455788999998763 334679
Q ss_pred EEEEee--CChhhHHHHHHHHHHHHHHH
Q 014936 383 LRVTFA--VDPYSLEECLDRIKSFYQRH 408 (415)
Q Consensus 383 iRi~~~--~~~~~l~~~l~~l~~~~~~~ 408 (415)
+|||++ ++++|++.+++.|+++++.+
T Consensus 375 iRiS~~~~~t~~di~~l~~~l~~~~~~~ 402 (403)
T TIGR01979 375 CRASFYIYNTEEDIDALVEALKKVRKFF 402 (403)
T ss_pred EEEEeccCCCHHHHHHHHHHHHHHHHHh
Confidence 999996 58899999999998877643
No 121
>KOG0633 consensus Histidinol phosphate aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=1.4e-31 Score=221.07 Aligned_cols=287 Identities=19% Similarity=0.298 Sum_probs=233.3
Q ss_pred CCCCCcEEEeCChHHHHHHHHHHhcCCC-CEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCC--C
Q 014936 97 KLTPNDVFVTSGCTQAIDVAMALLSRPG-ANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ--N 173 (415)
Q Consensus 97 ~~~~~~i~i~~g~~~al~~~~~~l~~~g-d~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~--~ 173 (415)
+.++|+|.+..|+.+.+.+++++.+.|| ++|+.-.|+|+-|.-.+...+++++.+|.++ +|.+|++.+.+.++. .
T Consensus 83 pLt~dnic~GvGsDE~ID~iiR~~c~PGkeKIl~cPPtysMY~v~A~iNd~eVvkvpl~p--dF~lnvdai~evl~~ds~ 160 (375)
T KOG0633|consen 83 PLTSDNICVGVGSDELIDLIIRCVCDPGKEKILDCPPTYSMYVVDAAINDAEVVKVPLNP--DFSLNVDAIAEVLELDSK 160 (375)
T ss_pred CCCccceEEecCcHHHHHHHHhheecCCccceeecCCcceeEEEEeecCCceEEEecCCC--CccccHHHHHHHHhcccc
Confidence 6889999999999999999999999999 8999999999999999999999999999876 577999999887754 5
Q ss_pred ceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCce
Q 014936 174 TVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWR 253 (415)
Q Consensus 174 ~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r 253 (415)
.|.+++++|+||||..+..+++++|.+.-. |.++++||+|.+|...+. .+.-....++++++.++||.||++|+|
T Consensus 161 iK~~F~tSPgNPtg~~ik~~di~KiLe~p~--nglVVvDEAYidFsg~~S---~~~lV~kYpNLivlqTlSKsfGLAGiR 235 (375)
T KOG0633|consen 161 IKCIFLTSPGNPTGSIIKEDDILKILEMPD--NGLVVVDEAYIDFSGVES---RMKLVKKYPNLIVLQTLSKSFGLAGIR 235 (375)
T ss_pred ceEEEEcCCCCCCcccccHHHHHHHHhCCC--CcEEEEeeeeEeeccccc---cchHhHhCCceeehhhhhhhcCcceeE
Confidence 788999999999999999999999998654 889999999999764322 233345567889999999999999999
Q ss_pred EEEEEeeCCCCCCChHHHHHHHHhhccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCC
Q 014936 254 LGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPH 333 (415)
Q Consensus 254 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~ 333 (415)
+|+-..+. .+++-+..... ....+..+..++.+++.+..-..++..++.+.+.+.++-+.|.++|.+.-+.
T Consensus 236 vG~~~~~~--------~ia~iln~~Ka-PYNiS~~~s~~AL~Als~~n~kkme~~rdaiv~er~RL~keLt~v~~~~~~~ 306 (375)
T KOG0633|consen 236 VGYGAFPL--------SIAEILNRAKA-PYNISVAGSVAALAALSDSNGKKMEDVRDAIVRERERLFKELTEVPFLNDYP 306 (375)
T ss_pred eecccccH--------HHHHHHHhccC-CccccchhHHHHHHhcCcccchHHHHHHHHHHHHHHHHHHHhhcCccccCCC
Confidence 99998865 57777766655 4566777888888888865557889999999999999999999988776444
Q ss_pred CCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEE-cCCCCCCCCeEEEEeeCChhhHHHHHHHHHH
Q 014936 334 KPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIIL-PGTAVGLKNWLRVTFAVDPYSLEECLDRIKS 403 (415)
Q Consensus 334 ~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~-~g~~~~~~~~iRi~~~~~~~~l~~~l~~l~~ 403 (415)
.+..++|+.+++.... +. -+..+..+++.+.||.|+ -|+-.+..+++||+.++++|. .-+++.|++
T Consensus 307 gg~daNFiLi~v~~~~--n~-~akkly~q~at~~gVvVRfrgse~~c~G~lRitvGt~Een-tvL~k~~K~ 373 (375)
T KOG0633|consen 307 GGSDANFILIEVTGGD--NG-MAKKLYKQDATKMGVVVRFRGSEEGCKGYLRITVGTPEEN-TVLMKCLKQ 373 (375)
T ss_pred CcccccEEEEEEcCCC--cH-HHHHHHHHHHHhcceEEEEcCCccccceeEEEEcCCcccc-hHHHHHHHh
Confidence 6677889999886421 11 255667777788999986 466666789999999876654 444555544
No 122
>PRK09295 bifunctional cysteine desulfurase/selenocysteine lyase; Validated
Probab=100.00 E-value=3.4e-30 Score=245.21 Aligned_cols=332 Identities=14% Similarity=0.164 Sum_probs=239.5
Q ss_pred cceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCC-C-------CCCcHHHHHHHHHHHhhhCCCCCCCCcEEEe
Q 014936 35 KKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYA-P-------TAGLPLTRRAIAEYLSRDLPYKLTPNDVFVT 106 (415)
Q Consensus 35 ~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~-~-------~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~ 106 (415)
.+++.|+.+.. .++++.+++++.+.+.....+... . .....++|+.+|++++. .++++|++|
T Consensus 22 ~~~iYld~a~~-----~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~-----~~~~~v~~t 91 (406)
T PRK09295 22 LPLAYLDSAAS-----AQKPSQVIDAEAEFYRHGYAAVHRGIHTLSAQATEKMENVRKQAALFINA-----RSAEELVFV 91 (406)
T ss_pred CceEEEeCccc-----ccCCHHHHHHHHHHHHhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHcCc-----CCCCeEEEe
Confidence 46788888863 356788999998887632211111 1 12256888888888731 257899999
Q ss_pred CChHHHHHHHHHHh----cCCCCEEEEcCCCCcc----hHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEE
Q 014936 107 SGCTQAIDVAMALL----SRPGANILLPRPGFPI----YELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALV 178 (415)
Q Consensus 107 ~g~~~al~~~~~~l----~~~gd~vi~~~p~y~~----~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~ 178 (415)
+|++++++.++.++ .++||+|+++.+.|++ +...++..|+++..++.++ ++.+|++++++++++++++++
T Consensus 92 ~g~t~~l~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~--~~~~d~~~l~~~i~~~t~lv~ 169 (406)
T PRK09295 92 RGTTEGINLVANSWGNSNVRAGDNIIISEMEHHANIVPWQMLCARVGAELRVIPLNP--DGTLQLETLPALFDERTRLLA 169 (406)
T ss_pred CCHHHHHHHHHHHhhhhcCCCcCEEEECcchhhHHHHHHHHHHHHcCcEEEEEecCC--CCCCCHHHHHHhcCCCcEEEE
Confidence 99999999998874 5789999999998875 3455677899999998753 345899999999988999999
Q ss_pred ecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEE
Q 014936 179 IINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFV 258 (415)
Q Consensus 179 i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~ 258 (415)
+++|+||||.++| +++|+++|+++|+++++|++|+.+. ....+..++.+ +++.|++|.++.+| +||++
T Consensus 170 l~~~~n~tG~~~~---~~~i~~~~~~~~~~vivD~a~~~g~----~~~~~~~~~~D---~~~~s~~K~~gp~G--~G~l~ 237 (406)
T PRK09295 170 ITHVSNVLGTENP---LAEMIALAHQHGAKVLVDGAQAVMH----HPVDVQALDCD---FYVFSGHKLYGPTG--IGILY 237 (406)
T ss_pred EecchhcccccCC---HHHHHHHHHHcCCEEEEEcccccCc----cccCchhcCCC---EEEeehhhccCCCC--cEEEE
Confidence 9999999999976 6778888889999999999997633 22333333333 78889999877777 89998
Q ss_pred eeCCCCCCChHHHHHHHHh-----------------------hccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHH
Q 014936 259 TTDPCGMFRKPKVVERMKK-----------------------YFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQS 315 (415)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~ 315 (415)
+++ ++.+.+.. .....++++.....++.++++...+..++...++.+++
T Consensus 238 ~~~--------~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~r~e~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l 309 (406)
T PRK09295 238 VKE--------ALLQEMPPWEGGGSMIATVSLTEGTTWAKAPWRFEAGTPNTGGIIGLGAALDYVSALGLNNIAEYEQNL 309 (406)
T ss_pred Ech--------HhHhhCCCcccCCceeeeeecCCccccCCchhhcCCCCccHHHHHHHHHHHHHHHHhCHHHHHHHHHHH
Confidence 865 23222210 01113466777777777777654334567777888899
Q ss_pred HHHHHHHhhcCCCCcCCCCCC-CceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCC--------CCCeEEEE
Q 014936 316 VDICYNKIKEIPCISCPHKPE-GSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVG--------LKNWLRVT 386 (415)
Q Consensus 316 ~~~l~~~l~~~~~~~~~~~p~-~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~--------~~~~iRi~ 386 (415)
++++.+.|++++++.++ .|. .+..+.+.++. .+..++.. .|.++||.++.|..|. .++++|+|
T Consensus 310 ~~~l~~~l~~~~~~~~~-~~~~~~~iv~~~~~~------~~~~~~~~-~L~~~gI~v~~g~~c~~~~~~~~~~~~~iRiS 381 (406)
T PRK09295 310 MHYALSQLESVPDLTLY-GPQNRLGVIAFNLGK------HHAYDVGS-FLDNYGIAVRTGHHCAMPLMAYYNVPAMCRAS 381 (406)
T ss_pred HHHHHHHHhcCCCEEEe-CCCCCceEEEEEECC------cCHHHHHH-HHHhCCeEEeccccchHHHHHHHCCCCEEEEE
Confidence 99999999988887744 332 22344444542 13455544 4578899999988664 24689999
Q ss_pred ee--CChhhHHHHHHHHHHHHH
Q 014936 387 FA--VDPYSLEECLDRIKSFYQ 406 (415)
Q Consensus 387 ~~--~~~~~l~~~l~~l~~~~~ 406 (415)
++ ++++|++.+++.|+++..
T Consensus 382 ~~~ynt~~did~l~~~l~~i~~ 403 (406)
T PRK09295 382 LAMYNTHEEVDRLVAGLQRIHR 403 (406)
T ss_pred ccCCCCHHHHHHHHHHHHHHHH
Confidence 95 688999999999988643
No 123
>PRK05958 8-amino-7-oxononanoate synthase; Reviewed
Probab=100.00 E-value=3e-30 Score=244.75 Aligned_cols=333 Identities=14% Similarity=0.121 Sum_probs=229.4
Q ss_pred cCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCC--CCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChH
Q 014936 33 NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEK--FNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCT 110 (415)
Q Consensus 33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~--~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~ 110 (415)
++++++||+.+++ .++.++|.+++++.+.+.... ...|....|..++++.+++.+.+.++ .+ +.+++++++
T Consensus 37 ~g~~~id~~~~~~---~g~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~~---~~-~~i~~~~g~ 109 (385)
T PRK05958 37 DGRRMLNFASNDY---LGLARHPRLIAAAQQAARRYGAGSGGSRLVTGNSPAHEALEEELAEWFG---AE-RALLFSSGY 109 (385)
T ss_pred CCceEEEeeCCCc---ccCCCCHHHHHHHHHHHHhcCCCCCCcCcccCCcHHHHHHHHHHHHHhC---CC-cEEEECcHH
Confidence 4899999999863 245678999999999886411 11222222333444444444443333 23 445555566
Q ss_pred HHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCC---ceEEEecCCCCccc
Q 014936 111 QAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQN---TVALVIINPGNPCG 187 (415)
Q Consensus 111 ~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~---~~~v~i~~p~nptG 187 (415)
+++..++..+.++||.|+++.|+|+.+...+...|.++..++. .|++.+++.+++. +.++++.+++|++|
T Consensus 110 ~~~~~~l~~~~~~gd~V~~~~~~~~~~~~~~~~~g~~~~~~~~-------~d~~~l~~~i~~~~~~~~lvi~~~~~~~~G 182 (385)
T PRK05958 110 AANLAVLTALAGKGDLIVSDKLNHASLIDGARLSRARVRRYPH-------NDVDALEALLAKWRAGRALIVTESVFSMDG 182 (385)
T ss_pred HHHHHHHHHhCCCCCEEEEeCccCHHHHHHHHhcCCceEEeCC-------CCHHHHHHHHHhccCCCeEEEEEecccCCC
Confidence 7777787888999999999999999999888888998887754 3788888887652 44555556789999
Q ss_pred cCCCHHHHHHHHHHHhhcCcEEEEccccCCcccC--CCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCC
Q 014936 188 NVYSYQHLQKLAETANKLKTLVIADEVYGHLVFG--DKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGM 265 (415)
Q Consensus 188 ~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~--~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~ 265 (415)
.. .++++|+++|+++|+++|+||+|+.+.++ +........+...++++++.|+||.|+++| ||+++++
T Consensus 183 ~~---~~l~~i~~ia~~~~~~li~De~~~~g~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~~~~G---g~~~~~~---- 252 (385)
T PRK05958 183 DL---APLAELVALARRHGAWLLVDEAHGTGVLGPQGRGLAAEAGLAGEPDVILVGTLGKALGSSG---AAVLGSE---- 252 (385)
T ss_pred Cc---CCHHHHHHHHHHhCCEEEEECcccccccCCCCCchHHhhCCCCCCceEEEEechhhcccCC---cEEEcCH----
Confidence 88 55888999999999999999999776544 222222123334457899999999998777 8888754
Q ss_pred CChHHHHHHHHhhc---cccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEE
Q 014936 266 FRKPKVVERMKKYF---DILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVM 342 (415)
Q Consensus 266 ~~~~~~~~~~~~~~---~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~ 342 (415)
++.+.+.... ..+...++....++.++|+... . .++..+++.++++++.+.|+.+ +++ + .+..|.+++
T Consensus 253 ----~~~~~~~~~~~~~~~~~~~~~~~~aa~~aal~~~~-~-~~~~~~~~~~~~~~l~~~L~~~-~~~-~-~~~~~~~~~ 323 (385)
T PRK05958 253 ----TLIDYLINRARPFIFTTALPPAQAAAARAALRILR-R-EPERRERLAALIARLRAGLRAL-GFQ-L-MDSQSAIQP 323 (385)
T ss_pred ----HHHHHHHHhCccceecCCCCHHHHHHHHHHHHHHh-c-CHHHHHHHHHHHHHHHHHHHHc-CCC-c-CCCCCCEEE
Confidence 5666654331 1123355556566666665321 1 1466788999999999999987 666 4 334566778
Q ss_pred EecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCC---CCeEEEEee--CChhhHHHHHHHHHHH
Q 014936 343 LKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGL---KNWLRVTFA--VDPYSLEECLDRIKSF 404 (415)
Q Consensus 343 ~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~---~~~iRi~~~--~~~~~l~~~l~~l~~~ 404 (415)
+.++.. .++.++...+ .++||.+.++..+.. ++++||+++ .+++++++++++|+++
T Consensus 324 ~~~~~~-----~~~~~~~~~l-~~~gI~v~~~~~~~~~~~~~~lRis~~~~~~~~~i~~~l~~l~~~ 384 (385)
T PRK05958 324 LIVGDN-----ERALALAAAL-QEQGFWVGAIRPPTVPAGTSRLRITLTAAHTEADIDRLLEALAEA 384 (385)
T ss_pred EEeCCH-----HHHHHHHHHH-HHCCceEecccCCCCCCCCceEEEEecCCCCHHHHHHHHHHHHhc
Confidence 777531 1355677776 567999988654321 468999996 6899999999999865
No 124
>PRK02627 acetylornithine aminotransferase; Provisional
Probab=100.00 E-value=2.4e-30 Score=245.93 Aligned_cols=341 Identities=16% Similarity=0.158 Sum_probs=235.9
Q ss_pred ccCcceeEecccCCCCCCCCCC-cHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChH
Q 014936 32 KNEKKVISLAMGDPTVHSCFHT-THVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCT 110 (415)
Q Consensus 32 ~~~~~~i~l~~g~~~~~~~~~~-~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~ 110 (415)
.+|+.++||..|.+... ++. +|.+.+++.+.+..... ....+..++++.+++++.+..+ .+++++++|++
T Consensus 36 ~dg~~~iD~~~g~~~~~--lG~~~p~v~~a~~~~~~~~~~---~~~~~~~~~~~~la~~l~~~~~----~~~v~~~~gg~ 106 (396)
T PRK02627 36 DDGKEYLDFLAGIAVNN--LGHCHPKLVEAIQEQAAKLIH---TSNLYYIEPQEELAEKLVELSG----MDKVFFCNSGA 106 (396)
T ss_pred CCCCEEEECCccHHhcc--CCCCCHHHHHHHHHHHhhccc---cccccCCHHHHHHHHHHHhhcC----CCEEEECCCcH
Confidence 35788999998865432 444 68999999998875321 1112235788888888876533 48999999999
Q ss_pred HHHHHHHHHhcCCC-------CEEEEcCCCCcchHHHHHhCCCeEE-EeeccC-CCCC----CCChhHHHhhcCCCceEE
Q 014936 111 QAIDVAMALLSRPG-------ANILLPRPGFPIYELSAAFRHIEVR-HFDLLP-DKGW----EVDLDDIESLADQNTVAL 177 (415)
Q Consensus 111 ~al~~~~~~l~~~g-------d~vi~~~p~y~~~~~~~~~~g~~~~-~~~~~~-~~~~----~~~~~~l~~~~~~~~~~v 177 (415)
+|+..+++.+...+ ++|++..++|+++...+...+.... .....+ ..++ ..|++++++.+.++++++
T Consensus 107 eA~~~al~~a~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~v 186 (396)
T PRK02627 107 EANEAAIKLARKYGHKKGIEKPEIITAENSFHGRTLATLSATGQPKYQEGFEPLVEGFIYVPFNDIEALKAAITDKTAAV 186 (396)
T ss_pred HHHHHHHHHHHHHhcccCCCCCeEEEECCCcCcccHHHHHhcCCccccccCCCCCCCceEeCCCCHHHHHHhcCCCeEEE
Confidence 99999999765332 6799999999987666554432211 000000 0111 128999999998788888
Q ss_pred EecCCCCccc-cCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEE
Q 014936 178 VIINPGNPCG-NVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGW 256 (415)
Q Consensus 178 ~i~~p~nptG-~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~ 256 (415)
++..++||+| ..++.+.+++|.++|+++|+++|+||+|.++.+.+.. ..+...+..+++ .+|||.++ +|+|+||
T Consensus 187 ii~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DE~~~g~g~~g~~-~~~~~~~~~pdi---~t~sK~~~-~G~rig~ 261 (396)
T PRK02627 187 MLEPIQGEGGVNPADKEYLQALRELCDENGILLILDEVQTGMGRTGKL-FAYQHYGIEPDI---MTLAKGLG-GGVPIGA 261 (396)
T ss_pred EEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhcCCCccCce-eeehhcCCCCCE---EEEcchhh-CCcccEE
Confidence 8888899999 6889999999999999999999999999987665532 222223322232 37899987 8999999
Q ss_pred EEeeCCCCCCChHHHHHHHHhh-ccccCCchhHHHHHHHHhhCCCcH-HHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCC
Q 014936 257 FVTTDPCGMFRKPKVVERMKKY-FDILGDPATFIQAAVPSILQQPDE-VFFKKTLNLLKQSVDICYNKIKEIPCISCPHK 334 (415)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~a~~~~l~~~~~-~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~ 334 (415)
+++++ ++++.+... ...+.+.+++.|.++.++|+...+ +..++.++.....++.+.+.+.++|.+. . .
T Consensus 262 ~~~~~--------~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~-~ 331 (396)
T PRK02627 262 VLAKE--------KVADVFTPGDHGSTFGGNPLACAAALAVIEIIEEEGLLENAAEVGEYLRAKLRELLEKYPGIK-E-V 331 (396)
T ss_pred EEEcH--------HHHhccCCCCCCCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHhCCCee-e-e
Confidence 99975 577766543 233567889999999988864321 2333333333333444444333343333 2 3
Q ss_pred CCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEe--eCChhhHHHHHHHHHHHHHHH
Q 014936 335 PEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTF--AVDPYSLEECLDRIKSFYQRH 408 (415)
Q Consensus 335 p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~--~~~~~~l~~~l~~l~~~~~~~ 408 (415)
+..|.++|++++. +..+++..++++ ||.+.|+. .+++|+++ ..+++++++++++|+++++++
T Consensus 332 ~~~g~~~~i~~~~-------~~~~~~~~l~~~-Gv~v~~~~----~~~lRi~~~~~~~~~~i~~~~~~l~~~l~~~ 395 (396)
T PRK02627 332 RGLGLMIGIELDR-------PAAEIVKKALEK-GLLINVTG----DNVLRLLPPLIISKEEIDEAVDRLEEVLKEL 395 (396)
T ss_pred ccCcEEEEEEecC-------cHHHHHHHHHHC-CeEEeecC----CCEEEEECCcccCHHHHHHHHHHHHHHHHhh
Confidence 4468889988742 467777777655 99999864 37899987 578999999999999988653
No 125
>PLN02855 Bifunctional selenocysteine lyase/cysteine desulfurase
Probab=100.00 E-value=8.4e-30 Score=243.74 Aligned_cols=336 Identities=15% Similarity=0.216 Sum_probs=241.8
Q ss_pred CcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCC--C---CCC---CCCcHHHHHHHHHHHhhhCCCCCC-CCcEE
Q 014936 34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFN--G---YAP---TAGLPLTRRAIAEYLSRDLPYKLT-PNDVF 104 (415)
Q Consensus 34 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~--~---y~~---~~g~~~lr~~ia~~~~~~~~~~~~-~~~i~ 104 (415)
+.+++.|+.+.+ .++++.+++++.+.+...... . |.. ...+.++|+.++++++ +. +++|+
T Consensus 30 ~~~~iyLd~a~~-----~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~------~~~~~~v~ 98 (424)
T PLN02855 30 GSKLVYLDNAAT-----SQKPAAVLDALQDYYEEYNSNVHRGIHALSAKATDAYELARKKVAAFIN------ASTSREIV 98 (424)
T ss_pred CCCeEEeeCccc-----cCCCHHHHHHHHHHHHhcCCCCCCccchHHHHHHHHHHHHHHHHHHHcC------CCCCCEEE
Confidence 456889999874 345788999998876532111 1 111 1224688899999883 43 57999
Q ss_pred EeCChHHHHHHHHHHh----cCCCCEEEEcCCCCcc----hHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceE
Q 014936 105 VTSGCTQAIDVAMALL----SRPGANILLPRPGFPI----YELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVA 176 (415)
Q Consensus 105 i~~g~~~al~~~~~~l----~~~gd~vi~~~p~y~~----~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 176 (415)
+|+|+|++++.++.++ .++||+|+++.+.|++ +...++..|++++.++.+++ ..+|++.+++.+++++++
T Consensus 99 ~t~g~t~al~~i~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~a~~~g~~v~~v~~~~~--~~~~~~~l~~~i~~~t~l 176 (424)
T PLN02855 99 FTRNATEAINLVAYTWGLANLKPGDEVILSVAEHHSNIVPWQLVAQKTGAVLKFVGLTPD--EVLDVEQLKELLSEKTKL 176 (424)
T ss_pred EeCCHHHHHHHHHHHhhhhcCCCcCEEEECCCccHHHHHHHHHHHHHcCCEEEEEecCCC--CCcCHHHHHHHhccCceE
Confidence 9999999999998863 5789999999998875 34456778999999987543 348999999999889999
Q ss_pred EEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEE
Q 014936 177 LVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGW 256 (415)
Q Consensus 177 v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~ 256 (415)
+++++|+||||.++| +++|+++|+++|+++++|++|+.. .....+..++. .+++.|++|.++.+| +||
T Consensus 177 v~i~~~~n~tG~~~~---~~~I~~l~~~~g~~vivD~a~~~g----~~~~~~~~~~~---d~~~~s~~K~~gp~G--~G~ 244 (424)
T PLN02855 177 VATHHVSNVLGSILP---VEDIVHWAHAVGAKVLVDACQSVP----HMPVDVQTLGA---DFLVASSHKMCGPTG--IGF 244 (424)
T ss_pred EEEeCccccccccCC---HHHHHHHHHHcCCEEEEEhhhhcC----CcCCCchhcCC---CEEEeecccccCCCc--cEE
Confidence 999999999999987 567788889999999999999752 22223333333 277999999876666 899
Q ss_pred EEeeCCCCCCChHHHHHHHHhh----------------------ccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHH
Q 014936 257 FVTTDPCGMFRKPKVVERMKKY----------------------FDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQ 314 (415)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~----------------------~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~ 314 (415)
+++++ ++++.+... ....++++.....++..+++...+..+++..++..+
T Consensus 245 l~~~~--------~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~ 316 (424)
T PLN02855 245 LWGKS--------DLLESMPPFLGGGEMISDVFLDHSTYAPPPSRFEAGTPAIGEAIGLGAAIDYLSEIGMDRIHEYEVE 316 (424)
T ss_pred EEEch--------hhhhcCCCEecCCCceeeeecCccccCCChhhccCCChHHHHHHHHHHHHHHHHHhCHHHHHHHHHH
Confidence 99865 233332111 011234566666666666654333467788888999
Q ss_pred HHHHHHHHhhcCCCCcCCCCCC------CceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCC--------CC
Q 014936 315 SVDICYNKIKEIPCISCPHKPE------GSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVG--------LK 380 (415)
Q Consensus 315 ~~~~l~~~l~~~~~~~~~~~p~------~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~--------~~ 380 (415)
.++++.+.|++++++.++ .|. .+.++.+.++. .+..++...|.+++||.+..|..|. .+
T Consensus 317 l~~~l~~~L~~~~g~~i~-~~~~~~~~~r~~~v~~~~~~------~~~~~v~~~L~~~~gI~v~~g~~c~~~~~~~~g~~ 389 (424)
T PLN02855 317 LGTYLYEKLSSVPGVRIY-GPKPSEGVGRAALCAFNVEG------IHPTDLSTFLDQQHGVAIRSGHHCAQPLHRYLGVN 389 (424)
T ss_pred HHHHHHHHHhcCCCEEEe-CCCcccccCcccEEEEEECC------cCHHHHHHHhcccCCEEEechhhhhHHHHHHhCCC
Confidence 999999999988888744 322 23455566642 1355666666444599999887653 35
Q ss_pred CeEEEEee--CChhhHHHHHHHHHHHHHHHH
Q 014936 381 NWLRVTFA--VDPYSLEECLDRIKSFYQRHA 409 (415)
Q Consensus 381 ~~iRi~~~--~~~~~l~~~l~~l~~~~~~~~ 409 (415)
+++|+|++ ++++|++.+++.|+++++.++
T Consensus 390 ~~iRiS~~~ynt~~di~~l~~~l~~~~~~~~ 420 (424)
T PLN02855 390 ASARASLYFYNTKEEVDAFIHALKDTIAFFS 420 (424)
T ss_pred CeEEEEeccCCCHHHHHHHHHHHHHHHHHHH
Confidence 78999995 689999999999999988754
No 126
>cd00617 Tnase_like Tryptophanase family (Tnase). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to tryptophanase (Tnase) and tyrosine phenol-lyase (TPL). Tnase and TPL are active as tetramers and catalyze beta-elimination reactions. Tnase catalyzes degradation of L-tryptophan to yield indole, pyruvate and ammonia and TPL catalyzes degradation of L-tyrosine to yield phenol, pyruvate and ammonia.
Probab=100.00 E-value=4e-30 Score=241.19 Aligned_cols=347 Identities=16% Similarity=0.144 Sum_probs=250.8
Q ss_pred cCcceeEecccCC--CCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChH
Q 014936 33 NEKKVISLAMGDP--TVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCT 110 (415)
Q Consensus 33 ~~~~~i~l~~g~~--~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~ 110 (415)
.+.++++|..+++ +...+.+. .++.++..+++..++ ..|....|.++||+++++++ ..+++++|+|++
T Consensus 9 ~g~n~~~l~~~~v~iDlltds~t-~ams~~~~~a~~~gd-~~Y~~~~g~~~Leeaia~~~--------g~~~vv~t~~Gt 78 (431)
T cd00617 9 AGYNVFLLRSEDVYIDLLTDSGT-GAMSDYQWAAMMLGD-EAYAGSKSFYDLEDAVQDLF--------GFKHIIPTHQGR 78 (431)
T ss_pred cCCCEEeCCCCCcCCCCCCCCCc-HHHHHHHHHHHHhCC-CccCCCCCHHHHHHHHHHHH--------CCCeEEEcCCHH
Confidence 4888999999998 43332222 356666666665544 36999899999999999999 346899999999
Q ss_pred HHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCC--------CCCChhHHHhhcCCC----ceEEE
Q 014936 111 QAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKG--------WEVDLDDIESLADQN----TVALV 178 (415)
Q Consensus 111 ~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~--------~~~~~~~l~~~~~~~----~~~v~ 178 (415)
+|+.+++.++++|||.| +++|.|..+.......|++++.+++++..+ +.+|+++|+++++++ +++|+
T Consensus 79 ~Al~la~~al~~pGD~V-~~~~~f~~~~~~i~~~Ga~pv~v~i~~~~~~~~~~pf~gniD~e~Le~~I~~~~~~~~~~I~ 157 (431)
T cd00617 79 GAENILFSILLKPGRTV-PSNMHFDTTRGHIEANGAVPVDLVIDEAHDAQELIPFKGNIDVAKLEKLIDEVGAENIPYIV 157 (431)
T ss_pred HHHHHHHHHhCCCCCEE-ccCCcccchHHHHHhCCCEeEEEecccccccccccCCCCCcCHHHHHHHhCcccCCCccEEE
Confidence 99999999999999987 689999999999999999999999865432 449999999999865 67889
Q ss_pred ecCCCCcc-ccCCCHHHHHHHHHHHhhcCcEEEEccccCCc--cc-----CCCCcccccccCCCCCeEEEccCccccCCC
Q 014936 179 IINPGNPC-GNVYSYQHLQKLAETANKLKTLVIADEVYGHL--VF-----GDKPFVPMGVFGSTVPILTLGSLSKRWIVP 250 (415)
Q Consensus 179 i~~p~npt-G~~~~~~~l~~i~~~~~~~~~~li~De~~~~~--~~-----~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~ 250 (415)
+++|+||+ |++++.+++++|.++|++||+++|+|+++... .+ ++....++... ++.++|++|.+.++
T Consensus 158 v~~p~N~~gG~~~s~~~l~~i~eia~~~gi~li~DaAr~~~na~~i~~r~~g~~~~si~ei-----~~e~~s~sd~~~mS 232 (431)
T cd00617 158 LTITNNTAGGQPVSMANLREVRELAHKYGIPVVLDAARFAENAYFIKEREEGYRDKSIAEI-----AREMFSYADGCTMS 232 (431)
T ss_pred EECCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEEchhhHhhhhhhhcccccccCCCHHHH-----HHHhhccCCEEEEE
Confidence 99999998 99999999999999999999999999996532 12 12222222221 23455677776667
Q ss_pred Cce------EEEEEeeCCCCCCChHHHHHHHHhhcc-----c-cCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHH
Q 014936 251 GWR------LGWFVTTDPCGMFRKPKVVERMKKYFD-----I-LGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDI 318 (415)
Q Consensus 251 G~r------~G~~~~~~~~~~~~~~~~~~~~~~~~~-----~-~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~ 318 (415)
|+| .||+++++ ++++++++.... . .++.+.....+++..|++..+ . +..+...+++++
T Consensus 233 ~~K~~~~~~GG~i~~~d-------~~l~~~~~~~~~~~~~~~~~gG~~~r~~~A~A~gL~e~~~--~-~~l~~~~~~r~~ 302 (431)
T cd00617 233 AKKDGLVNIGGFLALRD-------DELYEEARQRVVLYEGFVTYGGMAGRDMEALAQGLREAVE--E-DYLRHRVEQVRY 302 (431)
T ss_pred eecCCCCccceEEEeCc-------HHHHHHHHHhccccCCccccccccHHHHHHHHHHHHhccc--H-HHHHHHHHHHHH
Confidence 666 56888865 247777764321 1 122233334444446654211 1 222333335688
Q ss_pred HHHHhhcCCCCcCCCCCCCceEEEEecCcccc--C-CCCCHHHHHHHHHhhcCeEEEc-CCC-CC-----------CCCe
Q 014936 319 CYNKIKEIPCISCPHKPEGSMAVMLKLNLSLL--D-DIIDDIDFCFKLAKEESVIILP-GTA-VG-----------LKNW 382 (415)
Q Consensus 319 l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~--~-~~~~~~~~~~~ll~~~gi~v~~-g~~-~~-----------~~~~ 382 (415)
+.+.|++. |+. +..|.+|+++|++.+.-.. + ...++..++.+|+.+.||.+.- |+. ++ .-..
T Consensus 303 l~~~L~~~-G~~-v~~P~Ggh~v~~d~~~~~~~~~~~~~~~~~la~~L~~e~gV~~~~~g~~~~~~~~~~~~~~~~~~~~ 380 (431)
T cd00617 303 LGDRLDEA-GVP-IVEPAGGHAVFIDAREFLPHIPQEQFPAQALAAELYLEAGVRAVELGIFSAGRDPNTGENKYPELEL 380 (431)
T ss_pred HHHHHHHC-CCC-ccCCCcceEEEEEhHHhcCCCCcccCcHHHHHHHHHHHcCeeEEeecceecccCCCCCcccCCccce
Confidence 99999988 888 4489999999998764210 0 0115788999999999999643 442 11 0257
Q ss_pred EEEEe---eCChhhHHHHHHHHHHHHHH
Q 014936 383 LRVTF---AVDPYSLEECLDRIKSFYQR 407 (415)
Q Consensus 383 iRi~~---~~~~~~l~~~l~~l~~~~~~ 407 (415)
+|+++ ..+.+.++...+.|..++++
T Consensus 381 ~rl~~prr~~t~~~~~~~~~~~~~~~~~ 408 (431)
T cd00617 381 VRLAIPRRVYTQDHMDYVAAAVIALYER 408 (431)
T ss_pred eEEeccccccCHHHHHHHHHHHHHHHhh
Confidence 99999 35889999999999988876
No 127
>TIGR01821 5aminolev_synth 5-aminolevulinic acid synthase. This model represents 5-aminolevulinic acid synthase, an enzyme for one of two routes to the heme precursor 5-aminolevulinate. The protein is a pyridoxal phosphate-dependent enzyme related to 2-amino-3-ketobutyrate CoA tranferase and 8-amino-7-oxononanoate synthase. This enzyme appears restricted to the alpha Proteobacteria and mitochondrial derivatives.
Probab=100.00 E-value=6.5e-30 Score=242.94 Aligned_cols=333 Identities=16% Similarity=0.123 Sum_probs=234.9
Q ss_pred CcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCC------CCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeC
Q 014936 34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFN------GYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTS 107 (415)
Q Consensus 34 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~------~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~ 107 (415)
++++++|+.++ +.++..+|++++++.++++..... .|+......+|++.+|++++ .+..++++
T Consensus 44 ~~~~~~~~sn~---ylgl~~~p~v~~a~~~~~~~~~~~~~~s~~~~g~~~~~~~Le~~la~~~g--------~~~~l~~~ 112 (402)
T TIGR01821 44 AKDVTVWCSND---YLGMGQHPEVLQAMHETLDKYGAGAGGTRNISGTNIPHVELEAELADLHG--------KESALVFT 112 (402)
T ss_pred CeeEEEeEccC---cCCCCCCHHHHHHHHHHHHHcCCCCcchhhhhCCcHHHHHHHHHHHHHhC--------CCeEEEEC
Confidence 36789999998 677889999999999988752211 12333345788888888872 24566677
Q ss_pred ChHHHHHHHHHHhcC--CCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcC---C-CceEEEecC
Q 014936 108 GCTQAIDVAMALLSR--PGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLAD---Q-NTVALVIIN 181 (415)
Q Consensus 108 g~~~al~~~~~~l~~--~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~---~-~~~~v~i~~ 181 (415)
+|++++..++..+.. +|+.|+.+...|......+...|.++..+++ .|++++++.++ + ++++|++++
T Consensus 113 sG~~an~~ai~~l~~~~~~~~v~~~~~~h~s~~~~~~~~g~~~~~~~~-------~d~~~l~~~l~~~~~~~~~~v~~e~ 185 (402)
T TIGR01821 113 SGYVANDATLATLAKIIPGCVIFSDELNHASMIEGIRHSGAEKFIFRH-------NDVAHLEKLLQSVDPNRPKIIAFES 185 (402)
T ss_pred chHHHHHHHHHHhhCCCCCCEEEEcchHhHHHHHHHHHcCCeEEEECC-------CCHHHHHHHHHhccCCCCeEEEEcC
Confidence 779999999988765 6777777777777777777778887766543 25666666554 2 578899999
Q ss_pred CCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCC-CCCeEEEccCccccCCCCceEEEEEee
Q 014936 182 PGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS-TVPILTLGSLSKRWIVPGWRLGWFVTT 260 (415)
Q Consensus 182 p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~~~~G~r~G~~~~~ 260 (415)
|+||+|.+.+ +++|.++|+++|+++|+||+|+.+.++..+.......+. ....++++||||+|+++| ||++++
T Consensus 186 ~~~~~G~~~~---l~~i~~l~~~~~~~livDea~~~G~~g~~g~g~~~~~~~~~~~div~~t~sKa~g~~G---G~i~~~ 259 (402)
T TIGR01821 186 VYSMDGDIAP---IEEICDLADKYGALTYLDEVHAVGLYGPRGGGIAERDGLMHRIDIIEGTLAKAFGVVG---GYIAAS 259 (402)
T ss_pred CCCCCCCccC---HHHHHHHHHHcCCEEEEeCcccccccCCCCCccchhccCCCCCeEEEEechhhhccCC---ceeecC
Confidence 9999999966 788888899999999999999965544222111111121 123578899999999888 998875
Q ss_pred CCCCCCChHHHHHHHHhhc---cccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCC
Q 014936 261 DPCGMFRKPKVVERMKKYF---DILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEG 337 (415)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~ 337 (415)
+ ++++.++... .++.+.++..+.++.++|+...+ .+...++++++++++.+.|+++ ++. +..+ .
T Consensus 260 ~--------~~~~~l~~~~~~~~~t~~~~~~~~aaa~aaL~~~~~--~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~-~ 326 (402)
T TIGR01821 260 R--------KLIDAIRSYAPGFIFTTSLPPAIAAGATASIRHLKE--SQDLRRAHQENVKRLKNLLEAL-GIP-VIPN-P 326 (402)
T ss_pred H--------HHHHHHHHhCcCceecCcCCHHHHHHHHHHHHHhhc--CHHHHHHHHHHHHHHHHHHHHc-CCC-cCCC-C
Confidence 4 5777776432 12345677778887777764321 1445566778889999999887 776 3233 4
Q ss_pred ceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCC---CCeEEEEe--eCChhhHHHHHHHHHHHHHHH
Q 014936 338 SMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGL---KNWLRVTF--AVDPYSLEECLDRIKSFYQRH 408 (415)
Q Consensus 338 g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~---~~~iRi~~--~~~~~~l~~~l~~l~~~~~~~ 408 (415)
+.++.+.++.. ....++...+++++||.+.+...+.. ..++||++ .+++++++++++.|+++++++
T Consensus 327 ~~i~~i~~~~~-----~~a~~~~~~L~~~~Gi~v~~~~~p~~~~g~~~lRis~~~~~t~edi~~~~~~l~~~~~~~ 397 (402)
T TIGR01821 327 SHIVPVIIGDA-----ALCKKVSDLLLNKHGIYVQPINYPTVPRGTERLRITPTPAHTDKMIDDLVEALLLVWDRL 397 (402)
T ss_pred CCEEEEEeCCH-----HHHHHHHHHHHhcCCEEEEeECCCCCCCCCceEEEEeCCCCCHHHHHHHHHHHHHHHHHc
Confidence 55666555421 12456777766677999988654433 36899999 378999999999999988653
No 128
>PRK10534 L-threonine aldolase; Provisional
Probab=100.00 E-value=1.2e-30 Score=242.13 Aligned_cols=316 Identities=17% Similarity=0.143 Sum_probs=220.2
Q ss_pred eEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHH
Q 014936 38 ISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAM 117 (415)
Q Consensus 38 i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~ 117 (415)
|+|+++.. .+++|.+++++.+... ....|++..+..+|+++||+++ + .+.+++++|+++++.+++
T Consensus 2 ~~~~~~~~-----~~p~~~~~~a~~~~~~--~~~~Y~~~~~~~~L~~~la~~~------g--~~~~~v~~~g~~a~~~~l 66 (333)
T PRK10534 2 IDLRSDTV-----TRPSRAMLEAMMAAPV--GDDVYGDDPTVNALQDYAAELS------G--KEAALFLPTGTQANLVAL 66 (333)
T ss_pred cccccccC-----CCCCHHHHHHHHhccC--CCcccCCCHHHHHHHHHHHHHh------C--CCeEEEeCchHHHHHHHH
Confidence 67888873 3377899999877544 2357865568899999999998 2 345578888888888888
Q ss_pred HHhcCCCCEEEEcCCCCcc-hHHH-HHhCC-CeEEEeeccCCCCCCCChhHHHhhcCC------CceEEEecCCCCcccc
Q 014936 118 ALLSRPGANILLPRPGFPI-YELS-AAFRH-IEVRHFDLLPDKGWEVDLDDIESLADQ------NTVALVIINPGNPCGN 188 (415)
Q Consensus 118 ~~l~~~gd~vi~~~p~y~~-~~~~-~~~~g-~~~~~~~~~~~~~~~~~~~~l~~~~~~------~~~~v~i~~p~nptG~ 188 (415)
.+++++||+|+++.|+|.. +... +...+ ++++.++++ .++.+|+++|++++++ ++++|+++||+ +|.
T Consensus 67 ~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~d~~~l~~~i~~~~~~~~~~~lv~l~np~--~G~ 142 (333)
T PRK10534 67 LSHCERGEEYIVGQAAHNYLYEAGGAAVLGSIQPQPIDAA--ADGTLPLDKVAAKIKPDDIHFARTRLLSLENTH--NGK 142 (333)
T ss_pred HHhcCCCCeeEEechhhhhHhcCCchHHhcCceEEeecCC--CCCCCCHHHHHHhhcccCcCcccceEEEEecCC--CCe
Confidence 8889999999999888853 3221 23333 566666653 4577899999998865 57899999776 499
Q ss_pred CCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEE-EEEeeCCCCCCC
Q 014936 189 VYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLG-WFVTTDPCGMFR 267 (415)
Q Consensus 189 ~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G-~~~~~~~~~~~~ 267 (415)
+++.+++++|+++|+++++++++||+|.+....... .....+....+.++ .||||.|+++ +| |+++++
T Consensus 143 v~~~~~l~~i~~~~~~~~~~lvvDEA~~~~~~~~~~-~~~~~~~~~~~~~~-~s~SK~~~~~---~G~~~~~~~------ 211 (333)
T PRK10534 143 VLPREYLKQAWEFTRERNLALHVDGARIFNAVVAYG-CELKEITQYCDSFT-ICLSKGLGTP---VGSLLVGNR------ 211 (333)
T ss_pred ecCHHHHHHHHHHHHHcCCeEEeeHHHHHHHHHHcC-CCHHHHHhcCCEEE-EEeEcCCCCc---ccceEEcCH------
Confidence 999999999999999999999999998743211001 11111111112222 3899998654 67 576543
Q ss_pred hHHHHHHHHhhccccC---CchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEe
Q 014936 268 KPKVVERMKKYFDILG---DPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLK 344 (415)
Q Consensus 268 ~~~~~~~~~~~~~~~~---~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~ 344 (415)
++++.++.....+. ..+...+.++...|++ ..+..++..++++++.+.|+++ |+. + .+..++|+|++
T Consensus 212 --~~i~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~-----~~~~~~~~~~~r~~l~~~L~~~-g~~-~-~~~~~nfv~~~ 281 (333)
T PRK10534 212 --DYIKRARRWRKMTGGGMRQAGILAAAGLYALKH-----NVARLQEDHDNAAWLAEQLREA-GAD-V-MRQDTNMLFVR 281 (333)
T ss_pred --HHHHHHHHHHHHhCCchhhHHHHHHHHHHHHHh-----hHHHHHHHHHHHHHHHHHHHhC-CCc-c-CCCCceEEEEE
Confidence 68888876643221 2233556666556642 1233344556778999999988 787 4 34479999998
Q ss_pred cCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEee--CChhhHHHHHHHHHHHHH
Q 014936 345 LNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFA--VDPYSLEECLDRIKSFYQ 406 (415)
Q Consensus 345 l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~--~~~~~l~~~l~~l~~~~~ 406 (415)
++. .+..++ .++|+++||.+.|+. ++|++.. .+++++++++++|++++.
T Consensus 282 ~~~------~~~~~~-~~~l~~~gi~v~~~~------~~rl~~~~r~t~e~~~~~~~~l~~~~~ 332 (333)
T PRK10534 282 VGE------EQAAAL-GEYMRERNVLINASP------IVRLVTHLDVSREQLAEVVAHWRAFLA 332 (333)
T ss_pred CCc------hhHHHH-HHHHHHcCeeecCCc------eEEEEEEeCCCHHHHHHHHHHHHHHhc
Confidence 862 134444 556678899998873 5788773 689999999999987653
No 129
>PRK07179 hypothetical protein; Provisional
Probab=99.98 E-value=2e-29 Score=239.93 Aligned_cols=332 Identities=13% Similarity=0.084 Sum_probs=233.3
Q ss_pred cCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcC---C--CCCC-CCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEe
Q 014936 33 NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSE---K--FNGY-APTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVT 106 (415)
Q Consensus 33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~---~--~~~y-~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~ 106 (415)
.+..+++|+.++ +.++..+|++++++.+++... . ...+ .......+|++.+|+++ ..+.++++
T Consensus 52 ~g~~~~~~~~~~---YL~l~~~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~le~~la~~~--------g~~~~~~~ 120 (407)
T PRK07179 52 PGPDAIILQSND---YLNLSGHPDIIKAQIAALQEEGDSLVMSAVFLHDDSPKPQFEKKLAAFT--------GFESCLLC 120 (407)
T ss_pred CCCcEEEeecCC---ccCCCCCHHHHHHHHHHHHHhCCCCCccccccCCchHHHHHHHHHHHHh--------CCCcEEEE
Confidence 345678888877 667888999999999988631 1 1111 11124678888898887 23567889
Q ss_pred CChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCC-CceEEEecCCCCc
Q 014936 107 SGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ-NTVALVIINPGNP 185 (415)
Q Consensus 107 ~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~v~i~~p~np 185 (415)
+||++|+..++.++..+||.|+++.+.|.+....++..|.++..+++ .|++++++++++ .+++|++.+|+||
T Consensus 121 ~sG~~An~~~l~~l~~~g~~v~~~~~~h~s~~~~~~~~g~~~~~~~~-------~d~~~l~~~l~~~~~~lV~v~~v~n~ 193 (407)
T PRK07179 121 QSGWAANVGLLQTIADPNTPVYIDFFAHMSLWEGVRAAGAQAHPFRH-------NDVDHLRRQIERHGPGIIVVDSVYST 193 (407)
T ss_pred CCHHHHHHHHHHHhCCCCCEEEEECCcCHHHHHHHHHCCCeEEEecC-------CCHHHHHHHHHhcCCeEEEECCCCCC
Confidence 99999999999999999999999999999988888888888766543 488999998865 4778888899999
Q ss_pred cccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCC-eEEEccCccccCCCCceEEEEEeeCCCC
Q 014936 186 CGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVP-ILTLGSLSKRWIVPGWRLGWFVTTDPCG 264 (415)
Q Consensus 186 tG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~-~i~~~s~sK~~~~~G~r~G~~~~~~~~~ 264 (415)
||.+.| +++|.++|+++|+++|+||+|+.+.++..+...+..++.... .+++.|+||+++ .|+||+++++
T Consensus 194 tG~i~p---l~~I~~l~~~~~~~livDea~~~g~~g~~g~g~~~~~~~~~~vdi~~~S~sK~~g---~~~G~l~~~~--- 264 (407)
T PRK07179 194 TGTIAP---LADIVDIAEEFGCVLVVDESHSLGTHGPQGAGLVAELGLTSRVHFITASLAKAFA---GRAGIITCPR--- 264 (407)
T ss_pred CCcccc---HHHHHHHHHHcCCEEEEECcccccCcCCCCCchHHhcCCCCCCCEEEeechHhhh---ccCeEEEeCH---
Confidence 999977 677888889999999999999865543322222223332222 378889999975 3689999864
Q ss_pred CCChHHHHHHHHhhcc---ccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEE
Q 014936 265 MFRKPKVVERMKKYFD---ILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAV 341 (415)
Q Consensus 265 ~~~~~~~~~~~~~~~~---~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~ 341 (415)
++++.+..... +..+.++....++.++++.. ...+..+++++++++++.+.|+++ ++. + . ..+.++
T Consensus 265 -----~~~~~~~~~~~~~~~~~t~~~~~~aa~~aal~~~--~~~~~~~~~l~~~~~~l~~~L~~~-g~~-v-~-~~~~i~ 333 (407)
T PRK07179 265 -----ELAEYVPFVSYPAIFSSTLLPHEIAGLEATLEVI--ESADDRRARLHANARFLREGLSEL-GYN-I-R-SESQII 333 (407)
T ss_pred -----HHHHHHHHhCcCeeeCCCCCHHHHHHHHHHHHHH--hcCHHHHHHHHHHHHHHHHHHHHc-CCC-C-C-CCCCEE
Confidence 56665543321 22333444434444444431 223457788999999999999988 776 4 2 345677
Q ss_pred EEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCC---CCCeEEEEee--CChhhHHHHHHHHHHHHHHH
Q 014936 342 MLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVG---LKNWLRVTFA--VDPYSLEECLDRIKSFYQRH 408 (415)
Q Consensus 342 ~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~---~~~~iRi~~~--~~~~~l~~~l~~l~~~~~~~ 408 (415)
++.++.. ...+.+...|.++||.+..-.... ..+++||+++ +++++++++++.|++++++.
T Consensus 334 ~l~~~~~------~~~~~~~~~L~~~GI~~~~~~~p~~~~~~~~lRis~~~~~t~edi~~~~~~l~~~~~~~ 399 (407)
T PRK07179 334 ALETGSE------RNTEVLRDALEERNVFGAVFCAPATPKNRNLIRLSLNADLTASDLDRVLEVCREARDEV 399 (407)
T ss_pred EEEeCCH------HHHHHHHHHHHHCCceEeeecCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHHHHHhh
Confidence 7766421 133444445567899743211111 2478999995 68999999999999887753
No 130
>PRK01278 argD acetylornithine transaminase protein; Provisional
Probab=99.98 E-value=1.2e-29 Score=240.19 Aligned_cols=339 Identities=17% Similarity=0.137 Sum_probs=226.1
Q ss_pred ccCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHH
Q 014936 32 KNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQ 111 (415)
Q Consensus 32 ~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~ 111 (415)
.+|+.++||..|.-....+. .+|.+.+++.+++..... .+.. ...+....+++.+.+.. ..+++++++||++
T Consensus 28 ~dG~~~lD~~~g~~~~~lGh-~~p~v~~a~~~~~~~~~~--~~~~-~~~~~~~~la~~l~~~~----~~~~v~~~~sGse 99 (389)
T PRK01278 28 EDGERYLDFASGIAVNSLGH-AHPHLVEALKEQAEKLWH--VSNL-YRIPEQERLAERLVENS----FADKVFFTNSGAE 99 (389)
T ss_pred CCCCEEEECCccHhhccCCC-CCHHHHHHHHHHHHhcCc--cccc-cCChHHHHHHHHHHhhC----CCCEEEEcCCcHH
Confidence 35888999988753322233 579999999999875221 1111 11233334444443311 3479999999999
Q ss_pred HHHHHHHHh----cCCCC----EEEEcCCCCcchHHHHHhCCCeEEEeec-cC-CCCCC----CChhHHHhhcCCCceEE
Q 014936 112 AIDVAMALL----SRPGA----NILLPRPGFPIYELSAAFRHIEVRHFDL-LP-DKGWE----VDLDDIESLADQNTVAL 177 (415)
Q Consensus 112 al~~~~~~l----~~~gd----~vi~~~p~y~~~~~~~~~~g~~~~~~~~-~~-~~~~~----~~~~~l~~~~~~~~~~v 177 (415)
|+..+++++ .++|| +|++.+++|+++...+...+........ .+ ..++. .|++.+++.+++++++|
T Consensus 100 A~~~al~~ar~~~~~~G~~~r~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~av 179 (389)
T PRK01278 100 AVECAIKTARRYHYGKGHPERYRIITFEGAFHGRTLATIAAGGQEKYLEGFGPLVPGFDQVPFGDIEALKAAITPNTAAI 179 (389)
T ss_pred HHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCCcHHHHhccCChhhcccCCCCCCCceEeCCCCHHHHHHhhCCCeEEE
Confidence 999999887 34666 8999999999987766555433222110 00 11111 48999999998778887
Q ss_pred EecCCCCccc-cCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEE
Q 014936 178 VIINPGNPCG-NVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGW 256 (415)
Q Consensus 178 ~i~~p~nptG-~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~ 256 (415)
++..++|++| .++|.+++++|.++|++||+++|+||+|.++.+.+.... ....+.... +.|+||.++ +|+|+||
T Consensus 180 ivep~~~~~G~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~~~~-~~~~~~~pd---i~t~sK~l~-~G~~ig~ 254 (389)
T PRK01278 180 LIEPIQGEGGIRPAPDEFLKGLRQLCDENGLLLIFDEVQCGMGRTGKLFA-HEWAGVTPD---IMAVAKGIG-GGFPLGA 254 (389)
T ss_pred EEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCCccee-ecccCCCCC---EEEEehhcc-CCcceEE
Confidence 7776688888 788999999999999999999999999998766554221 112222222 347899975 8999999
Q ss_pred EEeeCCCCCCChHHHHHHHHhhc-cccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhh----cCCCCcC
Q 014936 257 FVTTDPCGMFRKPKVVERMKKYF-DILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIK----EIPCISC 331 (415)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~----~~~~~~~ 331 (415)
+++++ ++++.+.... ..+.+.+++.|.++.+.|+...+. +..++++++.+++.+.|+ ..+++..
T Consensus 255 ~~~~~--------~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~l~~~---~~~~~~~~~~~~l~~~l~~l~~~~~~~~~ 323 (389)
T PRK01278 255 CLATE--------EAAKGMTPGTHGSTYGGNPLAMAVGNAVLDVILAP---GFLDNVQRMGLYLKQKLEGLVDRFPDVIE 323 (389)
T ss_pred EEEcH--------HHHhccCCCCCCCCCCccHHHHHHHHHHHHHHhhh---HHHHHHHHHHHHHHHHHHHHHhhCCCcee
Confidence 99975 5666665442 334568889999988777542111 122333333333333333 3332221
Q ss_pred CCCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEe--eCChhhHHHHHHHHHHHHHH
Q 014936 332 PHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTF--AVDPYSLEECLDRIKSFYQR 407 (415)
Q Consensus 332 ~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~--~~~~~~l~~~l~~l~~~~~~ 407 (415)
. ....|.+++++++. +..++...++++ ||.+.|+. .+++||++ ..+++++++++++|.+++++
T Consensus 324 ~-v~g~G~~~~i~~~~-------~~~~~~~~l~~~-GV~~~p~~----~~~lR~~p~~~~~~~~i~~~l~~l~~~l~~ 388 (389)
T PRK01278 324 E-VRGKGLLLGLKCVV-------PNRDLVQALRDE-GLLTVGAG----DNVVRLLPPLIITEEEIDEALERLERAAES 388 (389)
T ss_pred e-EecccEEEEEEEec-------CHHHHHHHHHHC-CeEEeecC----CCEEEEeCCcccCHHHHHHHHHHHHHHHHh
Confidence 2 33467888877742 466777877655 99999874 47999997 47899999999999988764
No 131
>cd06451 AGAT_like Alanine-glyoxylate aminotransferase (AGAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to alanine-glyoxylate aminotransferase (AGAT), serine-glyoxylate aminotransferase (SGAT), and 3-hydroxykynurenine transaminase (HKT). AGAT is a homodimeric protein, which catalyses the transamination of glyoxylate to glycine, and SGAT converts serine and glyoxylate to hydroxypyruvate and glycine. HKT catalyzes the PLP-dependent transamination of 3-hydroxykynurenine, a potentially toxic metabolite of the kynurenine pathway.
Probab=99.98 E-value=6.6e-30 Score=239.56 Aligned_cols=319 Identities=16% Similarity=0.134 Sum_probs=226.2
Q ss_pred CCCcHHHHHHHHHHHhcCCCCCCCCC-CCcHHHHHHHHHHHhhhCCCCCCC-CcEEEeCChHHHHHHHHHHhcCCCCEEE
Q 014936 51 FHTTHVATEAVAEALLSEKFNGYAPT-AGLPLTRRAIAEYLSRDLPYKLTP-NDVFVTSGCTQAIDVAMALLSRPGANIL 128 (415)
Q Consensus 51 ~~~~~~~~~a~~~~~~~~~~~~y~~~-~g~~~lr~~ia~~~~~~~~~~~~~-~~i~i~~g~~~al~~~~~~l~~~gd~vi 128 (415)
.++++++.+++.+.+.. ..|+.. .-..++++.+++++ ++++ +.+++++|+++++.+++.++.++||+|+
T Consensus 8 ~~~~~~v~~a~~~~~~~---~~~~~~~~~~~~~~~~la~~~------g~~~~~~~~~~~~~t~al~~~~~~~~~~g~~vl 78 (356)
T cd06451 8 SNVPPRVLKAMNRPMLG---HRSPEFLALMDEILEGLRYVF------QTENGLTFLLSGSGTGAMEAALSNLLEPGDKVL 78 (356)
T ss_pred cCCCHHHHHHhCCCccC---CCCHHHHHHHHHHHHHHHHHh------cCCCCCEEEEecCcHHHHHHHHHHhCCCCCEEE
Confidence 56778888888654321 233321 11446677777776 3434 4578899999999999999999999999
Q ss_pred EcCCCCcc--hHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCC-CceEEEecCCCCccccCCCHHHHHHHHHHHhhc
Q 014936 129 LPRPGFPI--YELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ-NTVALVIINPGNPCGNVYSYQHLQKLAETANKL 205 (415)
Q Consensus 129 ~~~p~y~~--~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~ 205 (415)
++.++|++ +...++..|+++..++.++ ++.+|++++++.+++ +++++++++|+||+|.+++ +++|+++|+++
T Consensus 79 ~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~~~~~l~~~i~~~~~~~v~i~~~~~~~G~~~~---~~~i~~~a~~~ 153 (356)
T cd06451 79 VGVNGVFGDRWADMAERYGADVDVVEKPW--GEAVSPEEIAEALEQHDIKAVTLTHNETSTGVLNP---LEGIGALAKKH 153 (356)
T ss_pred EecCCchhHHHHHHHHHhCCCeEEeecCC--CCCCCHHHHHHHHhccCCCEEEEeccCCCcccccC---HHHHHHHHHhc
Confidence 99988876 4567788999999998754 356899999999987 8899999999999999976 56677788899
Q ss_pred CcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHHh---hc---
Q 014936 206 KTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKK---YF--- 279 (415)
Q Consensus 206 ~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~---~~--- 279 (415)
|+++++|++|+.. .....+...+. .+++.|++|+++.+ .++||++.++ ++++.+.. ..
T Consensus 154 ~~~li~D~~~~~g----~~~~~~~~~~~---d~~~~s~~K~l~~p-~g~G~l~~~~--------~~~~~~~~~~~~~~~~ 217 (356)
T cd06451 154 DALLIVDAVSSLG----GEPFRMDEWGV---DVAYTGSQKALGAP-PGLGPIAFSE--------RALERIKKKTKPKGFY 217 (356)
T ss_pred CCEEEEeeehhcc----CccccccccCc---cEEEecCchhccCC-CCcceeEECH--------HHHHHHHhcCCCCcee
Confidence 9999999998752 22222222222 25667889997654 3489999865 45555432 00
Q ss_pred --------------cccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCC--CceEEEE
Q 014936 280 --------------DILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPE--GSMAVML 343 (415)
Q Consensus 280 --------------~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~--~g~~~~~ 343 (415)
....+++...+.++.++++......+++..++.+++++++.+.|+.+ ++.....+. .+.++|+
T Consensus 218 ~~~~~~~~~~~~~~~~~~t~~~~~~~a~~aal~~l~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~ 296 (356)
T cd06451 218 FDLLLLLKYWGEGYSYPHTPPVNLLYALREALDLILEEGLENRWARHRRLAKALREGLEAL-GLKLLAKPELRSPTVTAV 296 (356)
T ss_pred ecHHHHHhhhcccCCCCCCChHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHc-CCeeccCcccCCCceEEE
Confidence 11234455555666666654333556778888899999999999987 666332222 3445566
Q ss_pred ecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEee--CChhhHHHHHHHHHHHH
Q 014936 344 KLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFA--VDPYSLEECLDRIKSFY 405 (415)
Q Consensus 344 ~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~--~~~~~l~~~l~~l~~~~ 405 (415)
.++.. .+..+++..+.+++||.+.+|..+..+++||++++ +++++++++++.|++++
T Consensus 297 ~~~~~-----~~~~~~~~~L~~~~gI~~~~g~~~~~~~~iRis~~~~~~~e~v~~~~~~l~~~~ 355 (356)
T cd06451 297 LVPEG-----VDGDEVVRRLMKRYNIEIAGGLGPTAGKVFRIGHMGEATREDVLGVLSALEEAL 355 (356)
T ss_pred ECCCC-----CCHHHHHHHHHHhCCEEEecccccccCCEEEEecCCCCCHHHHHHHHHHHHHHh
Confidence 66531 24567777765444999999886655689999995 68999999999998865
No 132
>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=99.98 E-value=8.2e-30 Score=223.62 Aligned_cols=357 Identities=19% Similarity=0.225 Sum_probs=270.8
Q ss_pred hHHHHHHHhhhcccccccCcceeEecccCC-CCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhC
Q 014936 16 TIKGMLSLLMQSVDDEKNEKKVISLAMGDP-TVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDL 94 (415)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~-~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~ 94 (415)
+|..+...+.++- ....|||++|.- +.....|.-+.|++|-+..+.......|-+..|.+++++.+++.+ +
T Consensus 12 pIlgL~e~f~~D~-----R~~KVNLgIGvY~de~Gk~pvl~aV~~Ae~~l~~~~~~k~Yl~i~G~~~f~~~~~~ll---F 83 (396)
T COG1448 12 PILGLKEAFKADP-----RPNKVNLGIGVYKDEDGKTPVLRAVKKAEKRLLEQEKTKNYLPIEGLPEFLEAVQKLL---F 83 (396)
T ss_pred chhHHHHHHhcCC-----CcCeeeeeeeeeeCCCCCcchhHHHHHHHHHhhccccccccCCcCCcHHHHHHHHHHh---c
Confidence 7777777777665 567899999962 222235667888888888777766678999999999999999998 4
Q ss_pred CCC---CCCCcE--EEeCChHHHHHHHHHHhc--CCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHH
Q 014936 95 PYK---LTPNDV--FVTSGCTQAIDVAMALLS--RPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIE 167 (415)
Q Consensus 95 ~~~---~~~~~i--~i~~g~~~al~~~~~~l~--~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~ 167 (415)
|.+ +..+++ +=|.|||.|+.++...+. .+..+|.+++|+|+++...+...|.++..++.-...+..+|.+.+.
T Consensus 84 G~d~~~l~~~Rv~t~Qt~GGTGAL~~~A~fl~~~~~~~~vwis~PtW~NH~~If~~aGl~v~~Y~Yyd~~~~~~df~~ml 163 (396)
T COG1448 84 GADSPALAEDRVATVQTLGGTGALRVAADFLARFFPDATVWISDPTWPNHKAIFEAAGLEVETYPYYDAETKGLDFDGML 163 (396)
T ss_pred CCCcHHHHhhhHhheecCCcchHHHHHHHHHHHhCCCceEEeCCCCcHhHHHHHHhcCCceeeeeccccccccccHHHHH
Confidence 433 344454 568999999999988875 4556799999999999999999999999999755555568988887
Q ss_pred hhcCC---CceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCC-CcccccccC-CCCCeEEEcc
Q 014936 168 SLADQ---NTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDK-PFVPMGVFG-STVPILTLGS 242 (415)
Q Consensus 168 ~~~~~---~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~-~~~~~~~~~-~~~~~i~~~s 242 (415)
..++. +...++...+|||||..++.+++++|+++.++.|.+.+.|-+|.+|.-+.. ....+..+. ....+++..|
T Consensus 164 a~L~~a~~~~vvLLH~CcHNPTG~D~t~~qW~~l~~~~~~r~lip~~D~AYQGF~~GleeDa~~lR~~a~~~~~~lva~S 243 (396)
T COG1448 164 ADLKTAPEGSVVLLHGCCHNPTGIDPTEEQWQELADLIKERGLIPFFDIAYQGFADGLEEDAYALRLFAEVGPELLVASS 243 (396)
T ss_pred HHHHhCCCCCEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCCeeeeehhhhhhccchHHHHHHHHHHHHhCCcEEEEeh
Confidence 66653 334445556699999999999999999999999999999999999764421 111122121 1123799999
Q ss_pred CccccCCCCceEEEEEeeCCCCCCChHHHHHHH----Hhh-ccccCCchhHHHHHHHHhhCCCc-----HHHHHHHHHHH
Q 014936 243 LSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERM----KKY-FDILGDPATFIQAAVPSILQQPD-----EVFFKKTLNLL 312 (415)
Q Consensus 243 ~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~----~~~-~~~~~~~~~~~~~a~~~~l~~~~-----~~~~~~~~~~~ 312 (415)
+||.|++.|-|+|++..-.+ +.+..+.+ ... +...++++..+...+..+|++.. +..++.+++++
T Consensus 244 ~SKnfgLYgERVGa~~vva~-----~~~~a~~v~sqlk~~iR~~ySnPP~~Ga~vva~IL~~p~Lra~W~~El~~Mr~Ri 318 (396)
T COG1448 244 FSKNFGLYGERVGALSVVAE-----DAEEADRVLSQLKAIIRTNYSNPPAHGAAVVATILNNPELRAEWEQELEEMRQRI 318 (396)
T ss_pred hhhhhhhhhhccceeEEEeC-----CHHHHHHHHHHHHHHHHhccCCCchhhHHHHHHHhCCHHHHHHHHHHHHHHHHHH
Confidence 99999999999999755321 22333333 333 23457788889999999998754 35567788999
Q ss_pred HHHHHHHHHHhhcC-C--CCcCCCCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEe-e
Q 014936 313 KQSVDICYNKIKEI-P--CISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTF-A 388 (415)
Q Consensus 313 ~~~~~~l~~~l~~~-~--~~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~-~ 388 (415)
.++|..|.+.|+.. + .+. ....+.|+|.+..+. .+.+.+|.++++|.+..+. |||+ +
T Consensus 319 ~~mR~~lv~~L~~~~~~~~f~-~i~~Q~GMFsy~Gls----------~~QV~rLree~~IY~v~sG--------Ri~vaG 379 (396)
T COG1448 319 LEMRQALVDALKALGAPRNFD-FIISQRGMFSYTGLS----------PEQVDRLREEFGIYLVASG--------RINVAG 379 (396)
T ss_pred HHHHHHHHHHHHhhCCCcccc-hHhhcCceeecCCCC----------HHHHHHHHHhccEEEecCC--------eeeecc
Confidence 99999999999973 2 366 447788999987653 3456788899999987643 9999 6
Q ss_pred CChhhHHHHHHHHHHH
Q 014936 389 VDPYSLEECLDRIKSF 404 (415)
Q Consensus 389 ~~~~~l~~~l~~l~~~ 404 (415)
.++.+++.+.+.|.++
T Consensus 380 l~~~ni~~va~ai~~v 395 (396)
T COG1448 380 LNTSNIDYVAKAIAAV 395 (396)
T ss_pred CChhhHHHHHHHHHhh
Confidence 8999999999988765
No 133
>TIGR02539 SepCysS Sep-tRNA:Cys-tRNA synthase. Aminoacylation of tRNA(Cys) with Cys, and cysteine biosynthesis in the process, happens in Methanocaldococcus jannaschii and several other archaea by misacylation of tRNA(Cys) with O-phosphoserine (Sep), followed by modification of the phosphoserine to cysteine. In some species, direct tRNA-cys aminoacylation also occurs but this pathway is required for Cys biosynthesis. Members of this protein catalyze the second step in this two step pathway, using pyridoxal phosphate and a sulfur donor to synthesize Cys from Sep while attached to the tRNA.
Probab=99.97 E-value=2e-29 Score=236.58 Aligned_cols=321 Identities=13% Similarity=0.099 Sum_probs=220.7
Q ss_pred CCcHHHHHHHHHHHhcCCCCCC--CC-----CCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCC
Q 014936 52 HTTHVATEAVAEALLSEKFNGY--AP-----TAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPG 124 (415)
Q Consensus 52 ~~~~~~~~a~~~~~~~~~~~~y--~~-----~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~g 124 (415)
.+.++..+++.+........++ +. ..-+.++++.+|+++ ..+.+++++|+++++..++.++.++|
T Consensus 19 ~~~~~~~~a~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~e~lA~~~--------g~~~~~i~~g~~~a~~~~~~~l~~~g 90 (370)
T TIGR02539 19 VLTEAARKALVEFGDGYSVCDFCGGRLDQITKPPIHDFLEDLAEFL--------GMDEARVTHGAREGKFAVMHALCKEG 90 (370)
T ss_pred CCcHHHHHHHHHHhhccccccccccccccccchHHHHHHHHHHHHh--------CCCceEEECChHHHHHHHHHHhhCCC
Confidence 4567788888776542111111 10 113567888899988 23567789999999999999999999
Q ss_pred CEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCC-------CceEEEecCCCCccccCCCHHHHHH
Q 014936 125 ANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ-------NTVALVIINPGNPCGNVYSYQHLQK 197 (415)
Q Consensus 125 d~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~-------~~~~v~i~~p~nptG~~~~~~~l~~ 197 (415)
|.|+++.+.|++....++..|+++..++++.+.++.+|+++|++.+++ ++++|++++|+||+|.. .++++
T Consensus 91 d~Vl~~~~~h~s~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lv~~~~p~~~~G~~---~~l~~ 167 (370)
T TIGR02539 91 DWVVLDGLAHYTSYVAAERAGLNVKEVPHTGHPEYKVDPEGYGEVIEEVEDESGKPPVLALLTHVDGEYGNL---PDAGK 167 (370)
T ss_pred CEEEECCcccHHHHHHHHHcCCEEEEEecCCcccCCcCHHHHHHHHHHhhhccCCCcEEEEEECCCCCCccc---cCHHH
Confidence 999999999887778889999999999986555678999999998752 57889999999999998 45778
Q ss_pred HHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHHh
Q 014936 198 LAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKK 277 (415)
Q Consensus 198 i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~ 277 (415)
|+++|+++|+++|+|++|+.+... ......+ ..++++|+||+++ +|.|+||+++++ ++++.++.
T Consensus 168 i~~la~~~~~~livDea~~~g~~~----~~~~~~~---~di~v~s~sK~~~-~~g~~G~l~~~~--------~~i~~l~~ 231 (370)
T TIGR02539 168 VAKVCREKGVPLLLNCAYTVGRMP----VSAKEIG---ADFIVGSGHKSMA-ASGPCGVLGMSE--------EWEDIVLR 231 (370)
T ss_pred HHHHHHHcCCeEEEECccccCCcC----CCHHHcC---CCEEEeeCccccc-CCCCEEEEEECH--------HHHhhhcc
Confidence 888899999999999999974211 1111222 2367799999986 566899999865 56776665
Q ss_pred hcccc---------CCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCC-CCCCCceEEEEecCc
Q 014936 278 YFDIL---------GDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCP-HKPEGSMAVMLKLNL 347 (415)
Q Consensus 278 ~~~~~---------~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~-~~p~~g~~~~~~l~~ 347 (415)
..... .+.....+.++..++... .++++...+.++. ++++.+.|+++ ++..+ ..|..++|++++++.
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~-~~~l~~~~~~~~~-~~~l~~~L~~~-g~~~~~~~~s~t~~v~~~~~~ 308 (370)
T TIGR02539 232 KSRYSPVKEVELLGCTSRGAPIVTMMASFPHV-VERVKRWDEEVKK-TRWFVAELEDI-GFIQLGQKPKEHDLVKFETPG 308 (370)
T ss_pred cccCCccceeeeecccccccHHHHHHHHHHHH-HHHHHHHHHHHHH-HHHHHHHHHhC-CcEEEccCCCcCceEEEECCc
Confidence 43210 111112344444444321 2444444444444 45899999988 67632 246778899887752
Q ss_pred cc---cCCCCCHHHHHHHHHhhcCeE-EEcCCCCCCCCeEEEEe-eCChhhHHHHHHHHHHHHHH
Q 014936 348 SL---LDDIIDDIDFCFKLAKEESVI-ILPGTAVGLKNWLRVTF-AVDPYSLEECLDRIKSFYQR 407 (415)
Q Consensus 348 ~~---~~~~~~~~~~~~~ll~~~gi~-v~~g~~~~~~~~iRi~~-~~~~~~l~~~l~~l~~~~~~ 407 (415)
.. .+...+...+ .+.|.++||. +.++ .++++|+++ +.++++++++++.|++++++
T Consensus 309 ~~~~~~~~~~~~~~~-~~~L~e~GI~~ir~~----~~~~iRis~~~~t~e~i~~l~~~L~~~~~~ 368 (370)
T TIGR02539 309 FHEIAQKHKRRGYFL-YEELKKRGIHGIRSG----QTKYFKLSVYGLTKEQVEYVVDSFEEIVEE 368 (370)
T ss_pred hhHHhhhhccccHHH-HHHHHhCCCccccCC----cceEEEEEecCCCHHHHHHHHHHHHHHHHh
Confidence 10 0001122334 4445677997 5543 357999997 56899999999999887654
No 134
>PRK09064 5-aminolevulinate synthase; Validated
Probab=99.97 E-value=2.3e-29 Score=239.74 Aligned_cols=333 Identities=16% Similarity=0.118 Sum_probs=232.8
Q ss_pred CcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCC------CCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeC
Q 014936 34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKF------NGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTS 107 (415)
Q Consensus 34 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~------~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~ 107 (415)
++++++|++++ +.+++.+|.+++++.+.+..... ..|++.....+|++.+|+++ + . +..++.+
T Consensus 45 ~~~~~~~~s~d---ylgl~~~p~v~~a~~~~~~~~~~~~~~s~~~~g~~~~~~~l~~~la~~~------g-~-~~~~~~~ 113 (407)
T PRK09064 45 EREVTVWCSND---YLGMGQHPKVIEAMIEALDRCGAGAGGTRNISGTNHYHVELERELADLH------G-K-EAALVFT 113 (407)
T ss_pred CceEEEEECCC---CcCCCCCHHHHHHHHHHHHHcCCCCCCcCcCccCHHHHHHHHHHHHHHh------C-C-CcEEEEC
Confidence 46789999998 66788899999999988764221 12333445678888888887 2 2 3445555
Q ss_pred ChHHHHHHHHHHhcC--CCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcC----CCceEEEecC
Q 014936 108 GCTQAIDVAMALLSR--PGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLAD----QNTVALVIIN 181 (415)
Q Consensus 108 g~~~al~~~~~~l~~--~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~----~~~~~v~i~~ 181 (415)
+|++++..++..+.. +++.|+.....|.+....+...+.++..+++ .|++++++.++ +++++|++++
T Consensus 114 sG~~an~~ai~~l~~~~~~~~i~~~~~~h~s~~~~~~~~~~~~~~~~~-------~d~~~le~~l~~~~~~~~~~v~~~~ 186 (407)
T PRK09064 114 SGYVSNDATLSTLAKLIPDCVIFSDELNHASMIEGIRRSRCEKHIFRH-------NDVAHLEELLAAADPDRPKLIAFES 186 (407)
T ss_pred cHHHHHHHHHHHHhCCCCCCEEEEeCcchHHHHHHHHHcCCcEEEECC-------CCHHHHHHHHHhccCCCCeEEEEeC
Confidence 566787877877654 7777777777787777777777887766553 36677776664 4678999999
Q ss_pred CCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCC-CCCeEEEccCccccCCCCceEEEEEee
Q 014936 182 PGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS-TVPILTLGSLSKRWIVPGWRLGWFVTT 260 (415)
Q Consensus 182 p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~~~~G~r~G~~~~~ 260 (415)
|+||+|.+.+ +++|.++|+++|+++|+||+|+.+.++..+.......+. ....++++||||+|+++| ||++++
T Consensus 187 v~s~~G~~~~---l~~i~~l~~~~~~~livDEa~~~G~~g~~g~g~~~~~~~~~~~div~~t~sKa~g~~G---G~~~~~ 260 (407)
T PRK09064 187 VYSMDGDIAP---IAEICDLADKYNALTYLDEVHAVGMYGPRGGGIAERDGLMDRIDIIEGTLAKAFGVMG---GYIAGS 260 (407)
T ss_pred CCCCCccccC---HHHHHHHHHHcCCEEEEECCCcccccCCCCCChHHhcCCCCCCeEEEEecchhhhccC---ceEecC
Confidence 9999999965 888888889999999999999854443222111111111 123588899999998888 998875
Q ss_pred CCCCCCChHHHHHHHHhhcc---ccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCC
Q 014936 261 DPCGMFRKPKVVERMKKYFD---ILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEG 337 (415)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~ 337 (415)
+ ++++.+..... ++...++..+.++.+.++... .....+++++++++++.+.|+++ ++. + .+..
T Consensus 261 ~--------~~~~~l~~~~~~~~~t~~~~~~~~~aa~~al~~~~--~~~~~~~~~~~~~~~l~~~L~~~-g~~-~-~~~~ 327 (407)
T PRK09064 261 A--------ALVDAVRSYAPGFIFTTSLPPAIAAAALASIRHLK--ESNEERERHQERAAKLKAALDAA-GIP-V-MPNE 327 (407)
T ss_pred H--------HHHHHHHHhCccccccCcCCHHHHHHHHHHHHHHh--cCHHHHHHHHHHHHHHHHHHHHc-CCC-C-CCCC
Confidence 4 57776654421 233456667777767665321 11334678889999999999987 676 3 3344
Q ss_pred ceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCC---CCeEEEEee--CChhhHHHHHHHHHHHHHHH
Q 014936 338 SMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGL---KNWLRVTFA--VDPYSLEECLDRIKSFYQRH 408 (415)
Q Consensus 338 g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~---~~~iRi~~~--~~~~~l~~~l~~l~~~~~~~ 408 (415)
+.++++.++.. ....++...+++++||.+.+...+.. .+++||+++ +++++++.+++.|+++++++
T Consensus 328 ~~iv~i~~~~~-----~~~~~l~~~L~~~~gi~v~~~~~p~~~~~~~~lRis~~~~~t~edi~~l~~~l~~~~~~~ 398 (407)
T PRK09064 328 SHIVPVMVGDP-----EKCKKASDMLLEEHGIYVQPINYPTVPRGTERLRITPTPFHTDEMIDHLVEALVEVWARL 398 (407)
T ss_pred CCEEEEEeCCH-----HHHHHHHHHHHHhCCEEEeeECCCCCCCCCceEEEEeCCCCCHHHHHHHHHHHHHHHHHc
Confidence 66666655421 12456777776677999988655433 268999994 68999999999999988654
No 135
>TIGR00707 argD acetylornithine and succinylornithine aminotransferases. Members of this family may also act on ornithine, like ornithine aminotransferase (EC 2.6.1.13) (see MEDLINE:90337349) and on succinyldiaminopimelate, like N-succinyldiaminopmelate-aminotransferase (EC 2.6.1.17, DapC, an enzyme of lysine biosynthesis) (see MEDLINE:99175097)
Probab=99.97 E-value=1e-29 Score=240.40 Aligned_cols=333 Identities=18% Similarity=0.158 Sum_probs=229.2
Q ss_pred cCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCC--CCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChH
Q 014936 33 NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEK--FNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCT 110 (415)
Q Consensus 33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~--~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~ 110 (415)
+++.++||..|.+....+ ..+|.+.+++.+.+.... ...|++ ....++++.+++++ | .+++++++|++
T Consensus 25 ~g~~~id~~~~~~~~~lG-~~~p~v~~a~~~~~~~~~~~~~~~~~-~~~~~l~~~la~~~----g----~~~~~~~~sg~ 94 (379)
T TIGR00707 25 NGKEYLDFVAGIAVNSLG-HAHPKLVEALKEQLEKLVHVSNLYYT-EPQEELAEKLVEHS----G----ADRVFFCNSGA 94 (379)
T ss_pred CCCEEEEcCcchhhccCC-CCCHHHHHHHHHHHhhccccccccCC-HHHHHHHHHHHhhC----C----CCEEEEeCCcH
Confidence 478899999975322222 245899999998877532 123432 33455666666665 2 35999999999
Q ss_pred HHHHHHHHHhc---C----CCCEEEEcCCCCcchHHHHHhCCCeEEE----eeccCCCCCC--CChhHHHhhcCCCceEE
Q 014936 111 QAIDVAMALLS---R----PGANILLPRPGFPIYELSAAFRHIEVRH----FDLLPDKGWE--VDLDDIESLADQNTVAL 177 (415)
Q Consensus 111 ~al~~~~~~l~---~----~gd~vi~~~p~y~~~~~~~~~~g~~~~~----~~~~~~~~~~--~~~~~l~~~~~~~~~~v 177 (415)
+++..+++++. . +||+|++++|+|+.+...+...+..... .+...+..+. .|++.+++.++++++++
T Consensus 95 ~a~~~a~~~~~~~~~~~~~~~~~vi~~~~~yh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~v 174 (379)
T TIGR00707 95 EANEAALKLARKYTGDKGKEKKKIIAFENSFHGRTMGALSATGQPKYQKGFEPLVPGFSYAPYNDIESLKKAIDDETAAV 174 (379)
T ss_pred HHHHHHHHHHHHHhhccCCCCCeEEEECCCcCCccHHHHHhcCChhhhccCCCCCCCceeeCCCCHHHHHHHhhhCeeEE
Confidence 99999998662 2 3799999999999887776655543321 1111111111 17899999988788888
Q ss_pred EecCCCCccccC-CCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEE
Q 014936 178 VIINPGNPCGNV-YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGW 256 (415)
Q Consensus 178 ~i~~p~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~ 256 (415)
++..++||+|.. ++.+++++|.++|+++|+++|+||+|.++.+.+.. .++...+..++++ +|||.++ +|+|+||
T Consensus 175 ~~~p~~~~~g~~~~~~~~l~~i~~l~~~~~~~~i~De~~~~~~~~g~~-~~~~~~~~~~d~~---t~sK~~~-~G~riG~ 249 (379)
T TIGR00707 175 IVEPIQGEGGVNPASAEFLKALREICKDKDALLIFDEVQTGIGRTGKF-FAYEHYGIEPDII---TLAKGLG-GGVPIGA 249 (379)
T ss_pred EEEccccCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccchh-hhHHhcCCCCCEE---EEccccc-CCcccEE
Confidence 886556777764 78999999999999999999999999987655432 2222222223333 6899987 9999999
Q ss_pred EEeeCCCCCCChHHHHHHHHhh-ccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcC--CC
Q 014936 257 FVTTDPCGMFRKPKVVERMKKY-FDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISC--PH 333 (415)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~--~~ 333 (415)
+++++ ++++.+... .....+.+++.|.++.++|+... ..+..++++++++.+.+.|+++ +... ..
T Consensus 250 ~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~aa~aaL~~~~---~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~ 317 (379)
T TIGR00707 250 TLAKE--------EVAEAFTPGDHGSTFGGNPLACAAALAVLEVIE---KERLLENVKEKGDYFKERLEEL-GKNYPNKE 317 (379)
T ss_pred EEEcH--------HHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHH---hhhHHHHHHHHHHHHHHHHHHH-HhhCCCCc
Confidence 99865 677777654 22345678899999988886321 1245566777777777777653 1110 11
Q ss_pred CCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEe--eCChhhHHHHHHHHHHH
Q 014936 334 KPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTF--AVDPYSLEECLDRIKSF 404 (415)
Q Consensus 334 ~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~--~~~~~~l~~~l~~l~~~ 404 (415)
.+..|+++|+.++. +..++... |.++||.+.|+. .+++|+++ ..+++++++++++|+++
T Consensus 318 ~~~~g~~~~~~~~~-------~~~~~~~~-l~~~Gv~v~~~~----~~~lRi~~~~~~t~~~i~~~~~~l~~~ 378 (379)
T TIGR00707 318 VRGKGLMLGIELEA-------PCKDIVKK-ALEKGLLVNCAG----PKVLRFLPPLIITKEEIDEAVSALEEA 378 (379)
T ss_pred cccCceEEEEEecC-------cHHHHHHH-HHHCCcEEeeCC----CCEEEEECCCcCCHHHHHHHHHHHHHh
Confidence 23468888888753 34556655 567799999864 47899997 36899999999999875
No 136
>cd06502 TA_like Low-specificity threonine aldolase (TA). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). TA catalyzes the conversion of L-threonine or L-allo-threonine to glycine and acetaldehyde in a secondary glycine biosynthetic pathway.
Probab=99.97 E-value=8.6e-30 Score=237.23 Aligned_cols=313 Identities=15% Similarity=0.105 Sum_probs=222.4
Q ss_pred CCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEc
Q 014936 51 FHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLP 130 (415)
Q Consensus 51 ~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~ 130 (415)
+++++.+++++.+..... ..|++.....++++.+++++ + ++++++++|+++++..++.++.++||+|+++
T Consensus 8 ~~~~~~v~~a~~~~~~~~--~~~~~~~~~~~l~~~~a~~~------g--~~~~~~~~~gt~a~~~~~~~l~~~gd~v~~~ 77 (338)
T cd06502 8 TGPTPEMLEAMAAANVGD--DVYGEDPTTAKLEARAAELF------G--KEAALFVPSGTAANQLALAAHTQPGGSVICH 77 (338)
T ss_pred CCCCHHHHHHHHhcccCC--cccCCCHHHHHHHHHHHHHh------C--CCeEEEecCchHHHHHHHHHhcCCCCeEEEe
Confidence 668899999998865432 25655567788999999887 2 5678888888999999999999999999999
Q ss_pred CCCCcchHH---HHHhCCCeEEEeeccCCCCCCCChhHHHhhcCC-------CceEEEecCCCCccccCCCHHHHHHHHH
Q 014936 131 RPGFPIYEL---SAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ-------NTVALVIINPGNPCGNVYSYQHLQKLAE 200 (415)
Q Consensus 131 ~p~y~~~~~---~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~-------~~~~v~i~~p~nptG~~~~~~~l~~i~~ 200 (415)
.|+|..+.. .+...|+++..++.+ .+.+|++++++++++ +++++++++|+|| |.+++.+++++|++
T Consensus 78 ~~~~~~~~~~~~~~~~~g~~~~~v~~~---~~~~d~~~l~~~i~~~~~~~~~~~~~v~l~~p~n~-g~~~~~~~l~~i~~ 153 (338)
T cd06502 78 ETAHIYTDEAGAPEFLSGVKLLPVPGE---NGKLTPEDLEAAIRPRDDIHFPPPSLVSLENTTEG-GTVYPLDELKAISA 153 (338)
T ss_pred cCcceeeecCCcHHHHcCceEEeecCC---CCcCCHHHHHHHhhccCCCcCCcceEEEEEeecCC-ccccCHHHHHHHHH
Confidence 999986543 345579999888763 256899999998864 6889999999997 66779999999999
Q ss_pred HHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhhcc
Q 014936 201 TANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFD 280 (415)
Q Consensus 201 ~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (415)
+|+++|+++|+||+|..+.....+. ++..+....+ +++.|+||+|+++| |+++..+ +++++.++....
T Consensus 154 ~~~~~~~~livDea~~~~~~~~~~~-~~~~~~~~~d-~~~~s~sK~~~~~~---g~~~~~~-------~~~~~~~~~~~~ 221 (338)
T cd06502 154 LAKENGLPLHLDGARLANAAAALGV-ALKTYKSGVD-SVSFCLSKGGGAPV---GAVVVGN-------RDFIARARRRRK 221 (338)
T ss_pred HHHHcCCeEeechHHHHHHHHhcCC-CHHHHHhcCC-EEEEeccccCCCcc---ceEEECC-------HHHHHHHHHHHH
Confidence 9999999999999986443211111 2222212222 45779999998887 5544322 257777765532
Q ss_pred ---ccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCccccCCCCCHH
Q 014936 281 ---ILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLDDIIDDI 357 (415)
Q Consensus 281 ---~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~~~~~~~~ 357 (415)
.+...+++.+.++...|+.. .+.+..+++.++++++.+.|+++ ++. + .+..++++.++++... ....
T Consensus 222 ~~~~~~~~~~~~~~a~~~~L~~~---~~~~~~~~~~~~~~~l~~~L~~~-~~~-~-~~~~~~~~~v~~~~~~----~~~~ 291 (338)
T cd06502 222 QAGGGMRQSGFLAAAGLAALEND---LWLRRLRHDHEMARRLAEALEEL-GGL-E-SEVQTNIVLLDPVEAN----AVFV 291 (338)
T ss_pred HhCCChhhHHHHHHHHHHHhcCc---hHHHHHHHHHHHHHHHHHHHHhc-CCC-c-ccccCCeEEEecCCcc----HHHH
Confidence 12345667777777777652 23455678888889999999988 454 3 3455667776664210 0112
Q ss_pred HHHHHHH--hhcCeEEEcCCCCCCCCeEEEEee--CChhhHHHHHHHHHH
Q 014936 358 DFCFKLA--KEESVIILPGTAVGLKNWLRVTFA--VDPYSLEECLDRIKS 403 (415)
Q Consensus 358 ~~~~~ll--~~~gi~v~~g~~~~~~~~iRi~~~--~~~~~l~~~l~~l~~ 403 (415)
++..++. .++|+.+.+.. .+++|++++ +++++++++++++++
T Consensus 292 ~l~~~l~~~~~~gi~~~~~~----~~~lRi~~~~~~~~~~i~~~~~~l~~ 337 (338)
T cd06502 292 ELSKEAIERRGEGVLFYAWG----EGGVRFVTHWDTTEEDVDELLSALKA 337 (338)
T ss_pred HHHHHHHHhhhCCEEEEecC----CCeEEEEeecCCCHHHHHHHHHHHhc
Confidence 2333222 15699987753 278999995 588999999998864
No 137
>PLN02721 threonine aldolase
Probab=99.97 E-value=3e-29 Score=235.04 Aligned_cols=328 Identities=16% Similarity=0.145 Sum_probs=220.9
Q ss_pred ceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHH
Q 014936 36 KVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDV 115 (415)
Q Consensus 36 ~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~ 115 (415)
.+++|+.+.+. . +++.+.+++.+.........|++ ...++|++++++++ .+.++++++|++++..
T Consensus 6 ~~~~~~~~~~~----~-~~~~~~~a~~~~~~~~~~~~~~~--~~~~l~~~la~~~~--------~~~~~~~~~Gs~a~~~ 70 (353)
T PLN02721 6 RVVDLRSDTVT----K-PTDAMRAAMANAEVDDDVLGYDP--TALRLEEEMAKIFG--------KEAALFVPSGTMGNLI 70 (353)
T ss_pred hhhhhhccccc----C-CCHHHHHHHHhccCCCcccCCCH--HHHHHHHHHHHHhC--------CceeEEecCccHHHHH
Confidence 46899999865 2 56888888876412222223433 36899999999993 2345666667777778
Q ss_pred HHHHhcC-CCCEEEEcCCCCcchHH---HHHhCCCeEEEeeccCCCCCCCChhHHHhhcC-------CCceEEEecCC-C
Q 014936 116 AMALLSR-PGANILLPRPGFPIYEL---SAAFRHIEVRHFDLLPDKGWEVDLDDIESLAD-------QNTVALVIINP-G 183 (415)
Q Consensus 116 ~~~~l~~-~gd~vi~~~p~y~~~~~---~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~-------~~~~~v~i~~p-~ 183 (415)
++.++++ +||+|++++|+|..... .+...|+++..++.+ .++.+|++.+++.++ +++++++++++ +
T Consensus 71 ~l~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~~~~~~~~~~~v~l~~~~~ 148 (353)
T PLN02721 71 SVLVHCDVRGSEVILGDNSHIHLYENGGISTLGGVHPRTVKNN--EDGTMDLDAIEAAIRPKGDDHFPTTRLICLENTHA 148 (353)
T ss_pred HHHHHccCCCCeEEEcCccceehhcccchhhhcCceeEecCCC--cCCCcCHHHHHHHHHhccCCCCCcceEEEEecccc
Confidence 8887777 99999999999876555 567789999888764 345689999999987 57888999775 7
Q ss_pred CccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCC
Q 014936 184 NPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPC 263 (415)
Q Consensus 184 nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~ 263 (415)
||+|.++|.+++++|+++|+++|+++|+|++|........+. ....+..... .++.|+||+|++ ++||++..+
T Consensus 149 np~G~~~~~~~l~~l~~l~~~~g~~livD~a~~~~~~~~~~~-~~~~~~~~~d-~~~~s~sK~l~~---~~G~~~~~~-- 221 (353)
T PLN02721 149 NCGGRCLSVEYTDKVGELAKRHGLKLHIDGARIFNASVALGV-PVHRLVKAAD-SVSVCLSKGLGA---PVGSVIVGS-- 221 (353)
T ss_pred ccCCccccHHHHHHHHHHHHHcCCEEEEEchhhhcchhhhCC-CHHHHhhhCC-EEEEecccccCC---ceeeEEecC--
Confidence 899999999999999999999999999999986432110011 1111111111 344579999754 357644322
Q ss_pred CCCChHHHHHHHHhhccc-cCCchhHHHHHH--HHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcC-CCCCCCce
Q 014936 264 GMFRKPKVVERMKKYFDI-LGDPATFIQAAV--PSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISC-PHKPEGSM 339 (415)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~a~--~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~-~~~p~~g~ 339 (415)
+++++.+...... ....+...+.++ ...++ ++.+. .++..++++.+.+.|++++++.. + .+..++
T Consensus 222 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~----~~~~~-~~~~~~~~~~l~~~L~~~~~~~~~~-~~~~~~ 290 (353)
T PLN02721 222 -----KSFIRKAKRLRKTLGGGMRQVGVLAAAALVALQ----ENVPK-LEDDHKKAKLLAEGLNQIKGLRVNV-AAVETN 290 (353)
T ss_pred -----HHHHHhHHHHHHhcCCCeehhHHHHHHHHHHHH----HHHHH-HHHHHHHHHHHHHHHHhCCCcEEec-CCccce
Confidence 2566665544321 122222222222 22232 23333 33445678889999998877742 3 344466
Q ss_pred EEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEee--CChhhHHHHHHHHHHHHH
Q 014936 340 AVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFA--VDPYSLEECLDRIKSFYQ 406 (415)
Q Consensus 340 ~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~--~~~~~l~~~l~~l~~~~~ 406 (415)
++|++++... + .+..++...+ .++||.+.|+. .+++|++++ .+++++++++++|++++.
T Consensus 291 ~~~~~~~~~~--~-~~~~~~~~~L-~~~gi~v~~~~----~~~lR~~~~~~~~~~~i~~~~~~l~~~~~ 351 (353)
T PLN02721 291 IVYFDITDGS--R-ITAEKLCKSL-EEHGVLLMPGN----SSRIRVVTHHQISDSDVQYTLSCFQQAAL 351 (353)
T ss_pred EEEEEccCCc--c-ccHHHHHHHH-HhCCcEEecCC----CceEEEEecCcCCHHHHHHHHHHHHHHhh
Confidence 7898886410 0 1355666666 57899999975 478999995 689999999999988764
No 138
>COG1104 NifS Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism]
Probab=99.97 E-value=4.4e-29 Score=223.64 Aligned_cols=331 Identities=15% Similarity=0.157 Sum_probs=248.6
Q ss_pred CCCcHHHHHHHHHHHhcC-----CCCCCC--CCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHh--c
Q 014936 51 FHTTHVATEAVAEALLSE-----KFNGYA--PTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALL--S 121 (415)
Q Consensus 51 ~~~~~~~~~a~~~~~~~~-----~~~~y~--~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l--~ 121 (415)
.++.|++++++...+... ..+.|+ ......+.|+.||+.+ ++++++|++|+|+||++++++... .
T Consensus 11 Tp~~~~v~~~m~~~~~~~fgNPsS~H~~G~~A~~~ve~AR~~iA~ll------ga~~~eIiFTSG~TEsnNlaI~g~~~a 84 (386)
T COG1104 11 TPVDPEVLEAMLPYLTEVFGNPSSLHSFGREARKAVEEAREQIAKLL------GADPEEIIFTSGATESNNLAIKGAALA 84 (386)
T ss_pred CCCCHHHHHHHHHHHHhhcCCccchhHhHHHHHHHHHHHHHHHHHHh------CCCCCeEEEecCCcHHHHHHHHhhHHh
Confidence 466799999998887642 112222 1134678899999998 678999999999999999999883 2
Q ss_pred ----CCCCEEEEcCCCCcchHHHHHhC---CCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHH
Q 014936 122 ----RPGANILLPRPGFPIYELSAAFR---HIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQH 194 (415)
Q Consensus 122 ----~~gd~vi~~~p~y~~~~~~~~~~---g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~ 194 (415)
+.|.+|+++.-.|++..+.++.. |.+|.+++++. +..+|+++|+++++++|.+|.+.+.||.+|++ .+
T Consensus 85 ~~~~~~~~HIIts~iEH~aVl~~~~~Le~~g~~Vtyl~V~~--~G~v~~e~L~~al~~~T~LVSim~aNnE~G~I---Qp 159 (386)
T COG1104 85 YRNAQKGKHIITSAIEHPAVLNTCRYLERQGFEVTYLPVDS--NGLVDLEQLEEALRPDTILVSIMHANNETGTI---QP 159 (386)
T ss_pred hhcccCCCeEEEcccccHHHHHHHHHHHhcCCeEEEeCCCC--CCeEcHHHHHHhcCCCceEEEEEecccCeeec---cc
Confidence 25789999999999988877655 99999999865 44699999999999999999999999999999 77
Q ss_pred HHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHHH
Q 014936 195 LQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVER 274 (415)
Q Consensus 195 l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~ 274 (415)
+++|.++|+++++++++|.+++. |+-+..+..+..+ +...|.+|.+|..| +|+++.++. ..-.|-+..-
T Consensus 160 I~ei~~i~k~~~i~fHvDAvQa~----Gkipi~~~~~~vD---~ls~SaHK~~GpkG--iGaLyv~~~--~~~~p~i~GG 228 (386)
T COG1104 160 IAEIGEICKERGILFHVDAVQAV----GKIPIDLEELGVD---LLSFSAHKFGGPKG--IGALYVRPG--VRLEPLIHGG 228 (386)
T ss_pred HHHHHHHHHHcCCeEEEehhhhc----CceeccccccCcc---eEEeehhhccCCCc--eEEEEECCC--CccCceeccC
Confidence 89999999999999999999998 5555555554433 55667899988888 888887442 2211222222
Q ss_pred HHhhccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcC-CCCcCCCC--CCCceEEEEecCccccC
Q 014936 275 MKKYFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEI-PCISCPHK--PEGSMAVMLKLNLSLLD 351 (415)
Q Consensus 275 ~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-~~~~~~~~--p~~g~~~~~~l~~~~~~ 351 (415)
-+......++.+.++..++..+++. ..+.++....++++.++.|.+.|... |.+..... +.-.+.+.+.++.
T Consensus 229 gQE~g~RsGTenv~~Ivg~~~A~~~-a~~~~~~~~~~~~~lr~~l~~~l~~~~p~~~~~g~~~~rlP~~~~~~f~g---- 303 (386)
T COG1104 229 GQERGLRSGTENVPGIVGFGKAAEI-AVEELEEENARLRKLRDRLEDGLLEIIPDVYLNGDDEPRLPNILNFSFPG---- 303 (386)
T ss_pred cCCCCCCCCCccHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEcCCcccCCCCeEEEEeCC----
Confidence 2333233567777777777777764 23667888899999999999999964 66552222 2223445555553
Q ss_pred CCCCHHHHHHHHHhhcCeEEEcCCCCCC-------------------CCeEEEEee--CChhhHHHHHHHHHHHHHHHHH
Q 014936 352 DIIDDIDFCFKLAKEESVIILPGTAVGL-------------------KNWLRVTFA--VDPYSLEECLDRIKSFYQRHAK 410 (415)
Q Consensus 352 ~~~~~~~~~~~ll~~~gi~v~~g~~~~~-------------------~~~iRi~~~--~~~~~l~~~l~~l~~~~~~~~~ 410 (415)
+ ..+.+.. .|..+||.++.|+.|.. .+.||||++ ++++|++.+++.|.+++++++.
T Consensus 304 -v-~gE~ll~-~L~~~gI~vStGSACsS~~~~pShVL~AmG~~~e~a~~siR~S~g~~tt~eei~~~~~~l~~~i~~lr~ 380 (386)
T COG1104 304 -V-EGESLLL-ALDLAGIAVSTGSACSSGSLEPSHVLRAMGISEELAHGSIRFSLGRFTTEEEIDAAAEALKEIIKRLRE 380 (386)
T ss_pred -C-cHHHHHH-hccccCeEEeccccccCCCCCccHHHHHcCCChHHhCccEEEEcCCCCCHHHHHHHHHHHHHHHHHHhh
Confidence 2 3444444 45778999999999864 368999995 6899999999999999999876
Q ss_pred H
Q 014936 411 Q 411 (415)
Q Consensus 411 ~ 411 (415)
.
T Consensus 381 ~ 381 (386)
T COG1104 381 L 381 (386)
T ss_pred h
Confidence 4
No 139
>cd06454 KBL_like KBL_like; this family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to serine palmitoyltransferase (SPT), 5-aminolevulinate synthase (ALAS), 8-amino-7-oxononanoate synthase (AONS), and 2-amino-3-ketobutyrate CoA ligase (KBL). SPT is responsible for the condensation of L-serine with palmitoyl-CoA to produce 3-ketodihydrospingosine, the reaction of the first step in sphingolipid biosynthesis. ALAS is involved in heme biosynthesis; it catalyzes the synthesis of 5-aminolevulinic acid from glycine and succinyl-coenzyme A. AONS catalyses the decarboxylative condensation of l-alanine and pimeloyl-CoA in the first committed step of biotin biosynthesis. KBL catalyzes the second reaction step of the metabolic degradation pathway for threonine converting 2-amino-3-ketobutyrate, to glycine and acetyl-CoA. The members of this CD are widely found in all three forms of life.
Probab=99.97 E-value=6.1e-29 Score=232.60 Aligned_cols=327 Identities=17% Similarity=0.152 Sum_probs=225.8
Q ss_pred ceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCC--CCC----CCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCCh
Q 014936 36 KVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKF--NGY----APTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGC 109 (415)
Q Consensus 36 ~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~--~~y----~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~ 109 (415)
.+++|+.++ +.+.+.+|++.+++++.+++... ..| +......++++.+++++ + . ++.++++++
T Consensus 2 ~~~~~~~~~---~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~----~--~--~~~iv~~sg 70 (349)
T cd06454 2 KVLNFCSND---YLGLANHPEVIEAAKEALDKYGVGAGGSRLISGTSDLHEELEEELAEFH----G--K--EAALVFSSG 70 (349)
T ss_pred CceecccCC---ccccCCCHHHHHHHHHHHHHhCCCCCCcCeecCCchHHHHHHHHHHHHh----C--C--CCEEEeccH
Confidence 467888776 44556679999999999874211 112 22333466777777766 2 2 245666666
Q ss_pred HHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCC-----CceEEEecCCCC
Q 014936 110 TQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ-----NTVALVIINPGN 184 (415)
Q Consensus 110 ~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~-----~~~~v~i~~p~n 184 (415)
++++..++.+++++||.|+++.|+|+.+...++..|+++..++. +|.+.+++.+++ +++++++++|+|
T Consensus 71 ~~a~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~-------~~~~~le~~i~~~~~~~~~~~v~~~~~~~ 143 (349)
T cd06454 71 YAANDGVLSTLAGKGDLIISDSLNHASIIDGIRLSGAKKRIFKH-------NDMEDLEKLLREARRPYGKKLIVTEGVYS 143 (349)
T ss_pred HHHHHHHHHHhcCCCCEEEEehhhhHHHHHHHHHcCCceEEecC-------CCHHHHHHHHHHhhccCCCeEEEEecccc
Confidence 78888888888899999999999999988888889999887652 467777777653 467778889999
Q ss_pred ccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCc-ccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCC
Q 014936 185 PCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPF-VPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPC 263 (415)
Q Consensus 185 ptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~-~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~ 263 (415)
|||... ++++|+++|+++|+++|+|++|+.+.+..... .........+.+++++|+||.++++| ||++.++
T Consensus 144 ~tG~~~---~~~~i~~~~~~~~~~livD~a~~~g~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~g---G~i~~~~-- 215 (349)
T cd06454 144 MDGDIA---PLPELVDLAKKYGAILFVDEAHSVGVYGPHGRGVEEFGGLTDDVDIIMGTLGKAFGAVG---GYIAGSK-- 215 (349)
T ss_pred CCCCcc---CHHHHHHHHHHcCCEEEEEccccccccCCCCCChhhhccccccCcEEEeechhhhcccC---CEEECCH--
Confidence 999984 47888899999999999999997644321111 00111123345699999999987765 8888754
Q ss_pred CCCChHHHHHHHHhhcc---ccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceE
Q 014936 264 GMFRKPKVVERMKKYFD---ILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMA 340 (415)
Q Consensus 264 ~~~~~~~~~~~~~~~~~---~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~ 340 (415)
++.+.+..... .+...++..+.++.+.++...+ .+..++++.++++.+.+.|+++ ++..+ .+.++.+
T Consensus 216 ------~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~--~~~~~~~~~~~~~~l~~~l~~~-g~~~~-~~~~~~~ 285 (349)
T cd06454 216 ------ELIDYLRSYARGFIFSTSLPPAVAAAALAALEVLQG--GPERRERLQENVRYLRRGLKEL-GFPVG-GSPSHII 285 (349)
T ss_pred ------HHHHHHHHhchhhhccCCCCHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHHhc-CCccc-CCCCCcE
Confidence 56666554321 1234566666677777654221 4567788999999999999887 66633 3434444
Q ss_pred EEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCC---CCCeEEEEee--CChhhHHHHHHHHHHH
Q 014936 341 VMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVG---LKNWLRVTFA--VDPYSLEECLDRIKSF 404 (415)
Q Consensus 341 ~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~---~~~~iRi~~~--~~~~~l~~~l~~l~~~ 404 (415)
.++.++.. .+..++...+++ .||.+.++.... ..+++|++++ .+++++++++++|+++
T Consensus 286 ~~~~~~~~-----~~~~~~~~~L~~-~gI~~~~~~~~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~ 348 (349)
T cd06454 286 PPLIGDDP-----AKAVAFSDALLE-RGIYVQAIRYPTVPRGTARLRISLSAAHTKEDIDRLLEALKEV 348 (349)
T ss_pred EEEeCCCh-----HHHHHHHHHHHh-CCceEEEecCCccCCCCCeEEEEEeCCCCHHHHHHHHHHHHHh
Confidence 44434311 135667677655 599998764322 1478999996 5899999999999764
No 140
>PRK03244 argD acetylornithine aminotransferase; Provisional
Probab=99.97 E-value=2.3e-29 Score=238.96 Aligned_cols=334 Identities=16% Similarity=0.112 Sum_probs=233.8
Q ss_pred ccCcceeEecccCCCCCCCCCC-cHHHHHHHHHHHhcCC--CCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCC
Q 014936 32 KNEKKVISLAMGDPTVHSCFHT-THVATEAVAEALLSEK--FNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSG 108 (415)
Q Consensus 32 ~~~~~~i~l~~g~~~~~~~~~~-~~~~~~a~~~~~~~~~--~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g 108 (415)
.+++.++||..|.+... ++. +|.+.+++.+++.... ...|+.+.+ .++.+.+++++ + ...++++++++|
T Consensus 40 ~dg~~~lD~~s~~~~~~--lG~~~p~v~~ai~~~~~~~~~~~~~~~~~~~-~~la~~l~~~~----~-~~~~~~v~~~~s 111 (398)
T PRK03244 40 VDGKEYLDLLGGIAVNA--LGHAHPAVVEAVTRQLATLGHVSNLFATEPQ-IALAERLVELL----G-APEGGRVFFCNS 111 (398)
T ss_pred CCCCEEEECCcCHhhcc--CCCCCHHHHHHHHHHHHhccCccCccCCHHH-HHHHHHHHHhC----C-CCCCCEEEEeCc
Confidence 35788999988764322 343 7999999999887532 234654322 45666665554 3 123579999999
Q ss_pred hHHHHHHHHHHhcCCC-CEEEEcCCCCcchHHHHHhC-CCe------------EEEeeccCCCCCCCChhHHHhhcCCCc
Q 014936 109 CTQAIDVAMALLSRPG-ANILLPRPGFPIYELSAAFR-HIE------------VRHFDLLPDKGWEVDLDDIESLADQNT 174 (415)
Q Consensus 109 ~~~al~~~~~~l~~~g-d~vi~~~p~y~~~~~~~~~~-g~~------------~~~~~~~~~~~~~~~~~~l~~~~~~~~ 174 (415)
+++++..+++.+..+| +.|+..+++|+++...+... |.. +..++. .|++.+++.+.+++
T Consensus 112 gsea~~~al~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~~~~~~~ 184 (398)
T PRK03244 112 GAEANEAAFKLARLTGRTKIVAAEGGFHGRTMGALALTGQPAKRAPFEPLPGGVEHVPY-------GDVDALAAAVDDDT 184 (398)
T ss_pred hHHHHHHHHHHHHHHCCCeEEEECCCcCCccHHHHhccCCcccccCCCCCCCCceEeCC-------CCHHHHHHhhcCCe
Confidence 9999999999776666 46777778998875544322 211 111211 37899999887778
Q ss_pred eEEEecCCCCccccCCCHHH-HHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCce
Q 014936 175 VALVIINPGNPCGNVYSYQH-LQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWR 253 (415)
Q Consensus 175 ~~v~i~~p~nptG~~~~~~~-l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r 253 (415)
+++++..++||+|.+++.++ +++|.++|++||+++|+||+|.++...|... .+...+..+++ .+|||+++ +|+|
T Consensus 185 ~aviiep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~gr~g~~~-~~~~~~~~pDi---~t~sK~l~-~G~~ 259 (398)
T PRK03244 185 AAVFLEPIQGEAGVVPPPAGYLAAAREITDRHGALLVLDEVQTGIGRTGAWF-AHQHDGVTPDV---VTLAKGLG-GGLP 259 (398)
T ss_pred EEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCcccchHH-hhhhhCCCCCE---EEEchhhh-CCcc
Confidence 88888888999999986655 9999999999999999999998876655422 11122222233 37899976 8999
Q ss_pred EEEEEeeCCCCCCChHHHHHHHHhh-ccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCC
Q 014936 254 LGWFVTTDPCGMFRKPKVVERMKKY-FDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCP 332 (415)
Q Consensus 254 ~G~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~ 332 (415)
+||+++++ ++++.+... ...++..+++.+.++.+.|+... -++..++++++.+++.+.|+++ +...+
T Consensus 260 ig~~~~~~--------~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~~~---~~~~~~~~~~~~~~l~~~L~~~-~~~~~ 327 (398)
T PRK03244 260 IGACLAFG--------PAADLLTPGLHGSTFGGNPVACAAALAVLDTIA---SEGLLENAERLGEQLRAGIEAL-GHPLV 327 (398)
T ss_pred cEEEEEcH--------HHHhhccCCCCcCCCCCCHHHHHHHHHHHHHHH---hccHHHHHHHHHHHHHHHHHhc-CCCce
Confidence 99999976 577766543 23356788999999999986421 1245577777788888888875 22211
Q ss_pred -CCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEee--CChhhHHHHHHHHHHHHHHH
Q 014936 333 -HKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFA--VDPYSLEECLDRIKSFYQRH 408 (415)
Q Consensus 333 -~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~--~~~~~l~~~l~~l~~~~~~~ 408 (415)
.....|+++|+.++.. ....+...+ .++||.+.+.. .++||++++ .++++++.++++|.+++++.
T Consensus 328 ~~v~g~g~~~~i~~~~~------~~~~~~~~l-~~~Gv~~~~~~----~~~iR~~p~~~~t~~~i~~~~~~l~~~l~~~ 395 (398)
T PRK03244 328 DHVRGRGLLLGIVLTAP------VAKAVEAAA-REAGFLVNAVA----PDVIRLAPPLIITDAQVDAFVAALPAILDAA 395 (398)
T ss_pred eeEeeccEEEEEEEecc------HHHHHHHHH-HHCCeEEeecC----CCEEEEECCCcCCHHHHHHHHHHHHHHHHhc
Confidence 1345788999988531 244555555 56799998742 478999983 68999999999999998753
No 141
>COG0520 csdA Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones]
Probab=99.97 E-value=2.3e-28 Score=227.85 Aligned_cols=333 Identities=18% Similarity=0.230 Sum_probs=253.2
Q ss_pred CcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcC--CC--CCCCC----CCCcHHHHHHHHHHHhhhCCCCCC-CCcEE
Q 014936 34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSE--KF--NGYAP----TAGLPLTRRAIAEYLSRDLPYKLT-PNDVF 104 (415)
Q Consensus 34 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~--~~--~~y~~----~~g~~~lr~~ia~~~~~~~~~~~~-~~~i~ 104 (415)
+++++.|+.+-.+ ..+..+.+++.+..... .. ..|.. +.-+++.|+.+|++++ .+ .++|+
T Consensus 20 ~~~~vylD~aa~~-----~~p~~V~~a~~~~~~~~~an~~r~~~~~~~~~t~~~e~aRe~va~~~~------a~~~~eIv 88 (405)
T COG0520 20 GKPLVYLDNAATS-----QKPQAVLDAVAEYYRRYNANVHRGAHTLAEEATDLYEAAREAVARFLN------ADSSDEIV 88 (405)
T ss_pred CCCeEEecCcccc-----cCCHHHHHHHHHHHHhhcCCcCcccchHHHHHHHHHHHHHHHHHHHhC------CCCCCeEE
Confidence 5677888877632 35788999998876421 11 12221 1346789999999984 46 48999
Q ss_pred EeCChHHHHHHHHHHh---cCCCCEEEEcCCCCcc----hHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEE
Q 014936 105 VTSGCTQAIDVAMALL---SRPGANILLPRPGFPI----YELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVAL 177 (415)
Q Consensus 105 i~~g~~~al~~~~~~l---~~~gd~vi~~~p~y~~----~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v 177 (415)
+|+|+|++++.+..++ .++||+|++..-.|++ +...++..|++++.++.+ +++.++.+.+++.++++|++|
T Consensus 89 ft~~tT~aln~va~~l~~~~~~gdeIv~s~~EH~sn~~pw~~~~~~~Ga~v~~i~~~--~~g~~~~~~~~~~i~~~Tklv 166 (405)
T COG0520 89 FTRGTTEALNLVARGLGRSLKPGDEIVVSDLEHHSNIVPWQELAKRTGAKVRVIPLD--DDGLLDLDALEKLITPKTKLV 166 (405)
T ss_pred EeCChhHHHHHHHHHhhhhhcCCCEEEEccCcchhhHHHHHHHHHhcCcEEEEEecC--CCCCcCHHHHHHhcCCCceEE
Confidence 9999999999999999 5899999999999985 455667789999999986 345689999999999999999
Q ss_pred EecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCC-CceEEE
Q 014936 178 VIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVP-GWRLGW 256 (415)
Q Consensus 178 ~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~-G~r~G~ 256 (415)
.+++.+|.||++ .++++|+++|+++|+++++|.+|+. +..+..++.++.+ ++..|.+|++..| | +|.
T Consensus 167 ais~vSn~tG~~---~pv~~I~~la~~~ga~v~VDaaq~~----~h~~idv~~l~~D---f~afsgHKwl~gP~G--iGv 234 (405)
T COG0520 167 ALSHVSNVTGTV---NPVKEIAELAHEHGALVLVDAAQAA----GHLPIDVQELGCD---FLAFSGHKWLLGPTG--IGV 234 (405)
T ss_pred EEECcccccccc---chHHHHHHHHHHcCCEEEEECcccc----CccCCCchhcCCC---EEEEcccccccCCCc--eEE
Confidence 999999999999 5699999999999999999999987 5555666777766 8888999954444 6 899
Q ss_pred EEeeCCCCCCChHHHHHHHHhh-----------------------ccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHH
Q 014936 257 FVTTDPCGMFRKPKVVERMKKY-----------------------FDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLK 313 (415)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~ 313 (415)
+++++ ++.+.+... ..-.++++......+.++++...+..++...++.+
T Consensus 235 Ly~r~--------~~l~~l~P~~~gg~~~~~~~~~~~~~~~~~p~rfe~gTpn~~~~i~l~aAl~~~~~ig~~~i~~~e~ 306 (405)
T COG0520 235 LYVRK--------ELLEELEPFLGGGGMIEYVSRDEGVTLAELPLRFEAGTPNIAGAIGLAAALDYLLEIGMEAIEAHER 306 (405)
T ss_pred EEEch--------HHHhhcCCcccCCCceeeecccccccccCcchhhccCCchHHHHHhHHHHHHHHHHHhHHHHHHHHH
Confidence 99876 455444110 11124555556666666665544566788889999
Q ss_pred HHHHHHHHHhhcCCCCcCCCCCC--CceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCC--------CCeE
Q 014936 314 QSVDICYNKIKEIPCISCPHKPE--GSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGL--------KNWL 383 (415)
Q Consensus 314 ~~~~~l~~~l~~~~~~~~~~~p~--~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~--------~~~i 383 (415)
++.+++.+.|+++|++.++..+. .+..+.+.++. ....++...| .++||.++.|..|.. +..+
T Consensus 307 ~L~~~~~~~L~~~~~v~i~g~~~~~r~~~vsF~v~~------~~~~dv~~~L-~~~gI~vr~g~~ca~p~~~~~~~~~~i 379 (405)
T COG0520 307 ELTEYLLEGLSELPGVEIYGPPDADRGGIVSFNVKG------IHPHDVATLL-DEKGIAVRAGHHCAQPLHRLLGVDATI 379 (405)
T ss_pred HHHHHHHHHHhcCCCeEEecCCcccCceEEEEEeCC------CCHHHHHHHH-HhCCeEEEeccccccHHHHhcCCCCce
Confidence 99999999999999998654442 34455555653 2456665555 667899999988753 4569
Q ss_pred EEEee--CChhhHHHHHHHHHHHHH
Q 014936 384 RVTFA--VDPYSLEECLDRIKSFYQ 406 (415)
Q Consensus 384 Ri~~~--~~~~~l~~~l~~l~~~~~ 406 (415)
|+|++ +++||++.+++.|+++.+
T Consensus 380 R~S~~~YNt~edid~l~~aL~~~~~ 404 (405)
T COG0520 380 RASLHLYNTEEDVDRLLEALKKALA 404 (405)
T ss_pred EEEEeecCCHHHHHHHHHHHHHHhh
Confidence 99996 689999999999998764
No 142
>PRK13393 5-aminolevulinate synthase; Provisional
Probab=99.97 E-value=3.5e-28 Score=231.15 Aligned_cols=333 Identities=14% Similarity=0.115 Sum_probs=230.9
Q ss_pred CcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCC------CCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeC
Q 014936 34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKF------NGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTS 107 (415)
Q Consensus 34 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~------~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~ 107 (415)
++++++|+.++ +.++..+|++++++.++++.... ..+....-..++++.+|++++ .+..++++
T Consensus 44 ~~~~~~~~sn~---ylgl~~~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~le~~la~~~g--------~~~~~~~~ 112 (406)
T PRK13393 44 PREVTVWCSND---YLGMGQHPAVLAAMHEALDTCGAGAGGTRNISGTNHYHVLLEAELADLHG--------KEAALLFT 112 (406)
T ss_pred CccEEEeeccc---ccCCCCCHHHHHHHHHHHHHcCCCCcccccccCChHHHHHHHHHHHHHhC--------CCcEEEeC
Confidence 46789999998 66677899999999999875221 111222235677788887762 35666666
Q ss_pred ChHHHHHHHHHHhcC--CCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcC----CCceEEEecC
Q 014936 108 GCTQAIDVAMALLSR--PGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLAD----QNTVALVIIN 181 (415)
Q Consensus 108 g~~~al~~~~~~l~~--~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~----~~~~~v~i~~ 181 (415)
+|++++..++..+.. +|+.|+++...|..........|.++..+++ .|++.+++.++ +++++|++.+
T Consensus 113 SG~~An~~ai~~l~~~~~g~~I~~~~~~H~s~~~~~~~~g~~~~~~~~-------~d~~~l~~~l~~~~~~~~~~v~~~~ 185 (406)
T PRK13393 113 SGYVSNWAALSTLGSRLPGCVILSDELNHASMIEGIRHSRAEKRIFRH-------NDPADLERKLSDLDPHRPKLVAFES 185 (406)
T ss_pred CcHHHHHHHHHHhhcCCCCCEEEEccchhHHHHHHHHHcCCeEEEeCC-------CCHHHHHHHHHhccCCCCEEEEEcC
Confidence 667899999987765 7888888888888888888888888777654 25666665553 3567888999
Q ss_pred CCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCC-CeEEEccCccccCCCCceEEEEEee
Q 014936 182 PGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTV-PILTLGSLSKRWIVPGWRLGWFVTT 260 (415)
Q Consensus 182 p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~-~~i~~~s~sK~~~~~G~r~G~~~~~ 260 (415)
++|++|.+.+ +++|.++|+++|+++|+||+|+.+.++..+.......+..+ ..++++||||.|+++| ||++++
T Consensus 186 v~~~~G~~~~---l~~i~~l~~~~~~~livDea~~~g~~g~~G~g~~~~~~~~~~~~i~~~tlsKa~g~~G---G~~~~~ 259 (406)
T PRK13393 186 VYSMDGDIAP---IAEICDVAEKHGAMTYLDEVHAVGLYGPRGGGIAEREGLADRLTIIEGTLAKAFGVMG---GYITGS 259 (406)
T ss_pred CCCCCCchhC---HHHHHHHHHHcCCEEEEECCccccccCCCCCchhhhcCCCCCCeEEEEeCchhhcccC---ceeeCC
Confidence 9999999966 78888888999999999999985554432221111111112 3577889999999888 998875
Q ss_pred CCCCCCChHHHHHHHHhhcc---ccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCC
Q 014936 261 DPCGMFRKPKVVERMKKYFD---ILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEG 337 (415)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~ 337 (415)
+ ++.+.++.... ++.+.++..+.++.++|+...+. ...+++++++++++.+.|+++ ++. + .+..
T Consensus 260 ~--------~~~~~l~~~~~~~~~t~~~~p~~~aa~~aaL~~~~~~--~~~~~~~~~~~~~l~~~L~~~-g~~-~-~~~~ 326 (406)
T PRK13393 260 A--------ALCDFIRSFASGFIFTTSLPPAVAAGALASVRHLKAS--SAERERHQDRVARLRARLDKA-GIP-H-LPNP 326 (406)
T ss_pred H--------HHHHHHHHhCcCceecCccCHHHHHHHHHHHHHHhhC--HHHHHHHHHHHHHHHHHHHHc-CCC-c-CCCC
Confidence 4 57777665432 23456677777777777643211 223466788899999999886 666 3 2344
Q ss_pred ceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCC---CCeEEEEee--CChhhHHHHHHHHHHHHHHH
Q 014936 338 SMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGL---KNWLRVTFA--VDPYSLEECLDRIKSFYQRH 408 (415)
Q Consensus 338 g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~---~~~iRi~~~--~~~~~l~~~l~~l~~~~~~~ 408 (415)
+.++.+.++.. .+..++...+++++||.+.++..+.. .+++||++. +++++++++++.|+++++++
T Consensus 327 ~~i~~v~~~~~-----~~~~~l~~~L~~~~Gi~v~~~~~p~~p~g~~~iRis~~~~~t~edid~l~~~l~~~~~~~ 397 (406)
T PRK13393 327 SHIVPVMVGDP-----VLCKQISDELLDRYGIYVQPINYPTVPRGTERLRITPSPLHTDADIEHLVQALSEIWARL 397 (406)
T ss_pred CCeEEEEeCCH-----HHHHHHHHHHHHhCCEEEEeECCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHHHHHhc
Confidence 55555544321 12456666666557999988765443 368999994 78999999999999987653
No 143
>cd00378 SHMT Serine-glycine hydroxymethyltransferase (SHMT). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). SHMT carries out interconversion of serine and glycine; it catalyzes the transfer of hydroxymethyl group of N5, N10-methylene tetrahydrofolate to glycine resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers; the mammalian enzyme forms a homotetramer comprising four pyridoxal phosphate-bound active sites.
Probab=99.97 E-value=2.1e-28 Score=233.00 Aligned_cols=339 Identities=16% Similarity=0.104 Sum_probs=233.3
Q ss_pred cceeEecccCCCCCCCCCCcHHHHHHHHHHHhcC------CCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCC
Q 014936 35 KKVISLAMGDPTVHSCFHTTHVATEAVAEALLSE------KFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSG 108 (415)
Q Consensus 35 ~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~------~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g 108 (415)
++.++|..++ ...++.+++++.+.+... ....|....+..++++.+++++++.+|. +...|+++ |
T Consensus 19 ~~~~~~~~~~------~~~~~~v~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~--~~~~v~~~-s 89 (402)
T cd00378 19 RETLELIASE------NFTSPAVMEAMGSDLTNKYAEGYPGKRYYGGCEYVDEIEDLAIERAKKLFGA--EYANVQPH-S 89 (402)
T ss_pred HhCeeeeccC------CcCCHHHHHHhcccccccccCCCCCCcccCCchHHHHHHHHHHHHHHHHhCC--CceeeecC-C
Confidence 5678997776 345789999998765311 1123445556677777766666655553 33455555 5
Q ss_pred hHHHHHHHHHHhcCCCCEEEEcCCCCcchHHH-----HHhCCCeEEEeeccCC-CCCCCChhHHHhhcC-CCceEEEecC
Q 014936 109 CTQAIDVAMALLSRPGANILLPRPGFPIYELS-----AAFRHIEVRHFDLLPD-KGWEVDLDDIESLAD-QNTVALVIIN 181 (415)
Q Consensus 109 ~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~-----~~~~g~~~~~~~~~~~-~~~~~~~~~l~~~~~-~~~~~v~i~~ 181 (415)
+++++..++.++.++||+|++++|+|.++... ++..|.++..++...+ +++.+|++++++.+. ++++++++++
T Consensus 90 gt~a~~~~l~~l~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~i~~~~~~~v~~~~ 169 (402)
T cd00378 90 GSQANLAVYFALLEPGDTIMGLDLSHGGHLTHGSFTKVSASGKLFESVPYGVDPETGLIDYDALEKMALEFKPKLIVAGA 169 (402)
T ss_pred cHHHHHHHHHHhcCCCCEEEEecCccCccccccccccccccceeEEEecCCcCcccCCcCHHHHHHHHHhCCCCEEEecC
Confidence 67999999999999999999999999876443 5667877777766443 257899999999885 5788888889
Q ss_pred CCCccccCCCHHHHHHHHHHHhhcCcEEEEcccc-CCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEee
Q 014936 182 PGNPCGNVYSYQHLQKLAETANKLKTLVIADEVY-GHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTT 260 (415)
Q Consensus 182 p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~-~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~ 260 (415)
|+||+ . .++++|+++|+++|+++|+|++| .++.+.+....++. .. + ++++|+||++ +|+|.||++++
T Consensus 170 ~~~~~--~---~~~~~I~~l~~~~~~~li~D~a~~~g~~~~g~~~~~~~--~~--d-v~~~s~sK~l--~G~~gg~i~~~ 237 (402)
T cd00378 170 SAYPR--P---IDFKRFREIADEVGAYLLVDMAHVAGLVAGGVFPNPLP--GA--D-VVTTTTHKTL--RGPRGGLILTR 237 (402)
T ss_pred cccCC--C---cCHHHHHHHHHhcCCEEEEEccchhhhhhcccCCCccc--CC--c-EEEeccccCC--CCCCceEEEec
Confidence 88764 3 35889999999999999999996 43334332222222 22 2 6789999985 78899999986
Q ss_pred CCCCCCChHHHHHHHHhhcc--ccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCc
Q 014936 261 DPCGMFRKPKVVERMKKYFD--ILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGS 338 (415)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g 338 (415)
++ ++.+.+..... ...++......++..++......+.++++++++++++.+.+.|+++ ++.++..|.++
T Consensus 238 ~~-------~~~~~l~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~ 309 (402)
T cd00378 238 KG-------ELAKKINSAVFPGLQGGPHLHVIAAKAVALKEALEPEFKAYAKQVVENAKALAEALKER-GFKVVSGGTDN 309 (402)
T ss_pred cH-------HHHHHHHHHhCccccCCchHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhC-CCeEeecCCCC
Confidence 42 46666655432 1122222333333333432222356778888999999999999988 77743346789
Q ss_pred eEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCC------CCCeEEEEee------CChhhHHHHHHHHHHHHH
Q 014936 339 MAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVG------LKNWLRVTFA------VDPYSLEECLDRIKSFYQ 406 (415)
Q Consensus 339 ~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~------~~~~iRi~~~------~~~~~l~~~l~~l~~~~~ 406 (415)
+++|++++... .+.. .+..+++++||.+.++..+. ...++|+++. .++++++.+++.|+++++
T Consensus 310 ~~v~v~~~~~~----~~~~-~~~~~l~~~gI~v~~~~~p~~~~~~~~~~~lRi~~~~~~~~~~~~~di~~~~~~l~~~~~ 384 (402)
T cd00378 310 HLVLVDLRPKG----ITGK-AAEDALEEAGITVNKNTLPWDPSSPFVPSGIRIGTPAMTTRGMGEEEMEEIADFIARALK 384 (402)
T ss_pred eEEEEeCCccC----CCHH-HHHHHHHHcCcEEcCCcCCCCCCCCCCCCeeEecCHHHHHhCCCHHHHHHHHHHHHHHHh
Confidence 99999986321 1233 44556788899997643222 2468999993 258999999999999776
Q ss_pred H
Q 014936 407 R 407 (415)
Q Consensus 407 ~ 407 (415)
+
T Consensus 385 ~ 385 (402)
T cd00378 385 D 385 (402)
T ss_pred c
Confidence 5
No 144
>cd06452 SepCysS Sep-tRNA:Cys-tRNA synthase. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Cys-tRNA(Cys) is produced by O-phosphoseryl-tRNA synthetase which ligates O-phosphoserine (Sep) to tRNA(Cys), and Sep-tRNA:Cys-tRNA synthase (SepCysS) converts Sep-tRNA(Cys) to Cys-tRNA(Cys), in methanogenic archaea. SepCysS forms a dimer, each monomer is composed of a large and small domain; the larger, a typical pyridoxal 5'-phosphate (PLP)-dependent-like enzyme fold. In the active site of each monomer, PLP is covalently bound to a conserved Lys residue near the dimer interface.
Probab=99.97 E-value=2.7e-28 Score=228.64 Aligned_cols=322 Identities=13% Similarity=0.090 Sum_probs=220.4
Q ss_pred CCCcHHHHHHHHHHHhcCCC-----CCCC--CCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCC
Q 014936 51 FHTTHVATEAVAEALLSEKF-----NGYA--PTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRP 123 (415)
Q Consensus 51 ~~~~~~~~~a~~~~~~~~~~-----~~y~--~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~ 123 (415)
-+..+++.+++.+....... .... ...-..++++.+|+++ ++ +++++++|+++++..++.+++++
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~------g~--~~i~~~~g~t~al~~~l~~~~~~ 82 (361)
T cd06452 11 GRLTPEARKALIEWGDGYSVCDFCRGRLDEIEKPPIKDFHHDLAEFL------GM--DEARVTPGAREGKFAVMHSLCEK 82 (361)
T ss_pred CCCCHHHHHHHHHHhcccCCccccccccccccCchHHHHHHHHHHHc------CC--ceEEEeCCHHHHHHHHHHHhcCC
Confidence 56678899999888742110 0111 1124678999999987 33 78999999999999999999999
Q ss_pred CCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcC-------CCceEEEecCCCCccccCCCHHHHH
Q 014936 124 GANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLAD-------QNTVALVIINPGNPCGNVYSYQHLQ 196 (415)
Q Consensus 124 gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~-------~~~~~v~i~~p~nptG~~~~~~~l~ 196 (415)
||+|+++.++|.+....++..|++++.++.+.+.++.+|+++++++++ ++++++++++|+||||.. .+++
T Consensus 83 gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lv~l~~p~n~tG~~---~~~~ 159 (361)
T cd06452 83 GDWVVVDGLAHYTSYVAAERAGLNVREVPNTGHPEYHITPEGYAEVIEEVKDEFGKPPALALLTHVDGNYGNL---HDAK 159 (361)
T ss_pred CCEEEEcCCcchHHHHHHHhcCCEEEEEecCCCCCcccCHHHHHHHHHHHhhccCCCceEEEEECCCCCCeee---ccHH
Confidence 999999999998887788999999999998655456899999998875 367899999999999988 6688
Q ss_pred HHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHH
Q 014936 197 KLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMK 276 (415)
Q Consensus 197 ~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~ 276 (415)
+|+++|+++|+++|+|++|+.... ......++. .++++|+||+++ ++.|+||+++++ ++++.+.
T Consensus 160 ~i~~~~~~~~~~vivD~a~~~g~~----~~~~~~~~~---d~~~~s~~K~l~-~~~~~G~l~~~~--------~~~~~l~ 223 (361)
T cd06452 160 KIAKVCHEYGVPLLLNGAYTVGRM----PVSGKELGA---DFIVGSGHKSMA-ASAPIGVLATTE--------EWADIVF 223 (361)
T ss_pred HHHHHHHHcCCeEEEECCcccCCc----CCCHHHcCC---CEEEecCCcccc-CCCCeEEEEECH--------HHHHHHh
Confidence 889999999999999999985321 112222332 388999999976 455999999865 5667665
Q ss_pred hhccc---------cCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCC-CCCCceEEEEecC
Q 014936 277 KYFDI---------LGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPH-KPEGSMAVMLKLN 346 (415)
Q Consensus 277 ~~~~~---------~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~-~p~~g~~~~~~l~ 346 (415)
..... ..+.......++...++.. .+.++...+ ..++++++.+.|++++++.++. .+...+++.++.+
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~-~~~~~~~~~-~~~~~~~l~~~L~~l~g~~v~~~~~~~~n~~~~~~~ 301 (361)
T cd06452 224 RTSQMFKIKEVELLGCTLRGAPLVTLMASFPHV-KERVKRWDE-EVEKARWFVAELEKIEGIKQLGEKPKNHDLMFFETP 301 (361)
T ss_pred ccccccccceeeeeccccCchHHHHHHHHHHHH-HHHHHHHHH-HHHHHHHHHHHHhcCCCeEEECCCCCCCceEEEEcC
Confidence 53211 1111111233333333211 122333322 3345578889999988887331 2344566666654
Q ss_pred cccc---CCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEe-eCChhhHHHHHHHHHHHH
Q 014936 347 LSLL---DDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTF-AVDPYSLEECLDRIKSFY 405 (415)
Q Consensus 347 ~~~~---~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~-~~~~~~l~~~l~~l~~~~ 405 (415)
.... .......++...| .++||.+.. .+...++|++. +.++++++.+++.|+++.
T Consensus 302 ~~~~~~~~~~~~~~~~~~~L-~~~gI~~~~---~~~~~~~ri~~~g~~~e~~~~l~~al~~~~ 360 (361)
T cd06452 302 SFDEIAKKHKRRGYFLYSEL-KKRGIHGIK---PGLTRYFKLSTYGLTWEQVEYVVDAFKEIA 360 (361)
T ss_pred CcchhhhhccccchhHHHHH-HHcCceEEc---CCCceEEEEEecCCCHHHHHHHHHHHHHHh
Confidence 1000 0001223566666 556998532 23356899999 668999999999988653
No 145
>TIGR01976 am_tr_V_VC1184 cysteine desulfurase family protein, VC1184 subfamily. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family (pfam00266). The most closely related characterized proteins are active as cysteine desulfurases, selenocysteine lyases, or both; some are involved in FeS cofactor biosynthesis and are designated NifS. An active site Cys residue present in those sequences, in motifs resembling GHHC or GSAC, is not found in this family. The function of members of this family is unknown, but seems unlike to be as an aminotransferase.
Probab=99.97 E-value=1.5e-28 Score=233.83 Aligned_cols=324 Identities=16% Similarity=0.175 Sum_probs=224.4
Q ss_pred eeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCC---CCCCCCCC----cHHHHHHHHHHHhhhCCCCCCCCcEEEeCCh
Q 014936 37 VISLAMGDPTVHSCFHTTHVATEAVAEALLSEKF---NGYAPTAG----LPLTRRAIAEYLSRDLPYKLTPNDVFVTSGC 109 (415)
Q Consensus 37 ~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~---~~y~~~~g----~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~ 109 (415)
.+.|..+.+ .++++.+++++.+.+..... ..|....+ ..++|+.+++++ +.++++|++++|+
T Consensus 18 ~~yl~~~~~-----~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ia~~~------~~~~~~v~~~~~~ 86 (397)
T TIGR01976 18 RVFFDNPAG-----TQIPQSVADAVSAALTRSNANRGGAYESSRRADQVVDDAREAVADLL------NADPPEVVFGANA 86 (397)
T ss_pred eEEecCCcc-----CCCCHHHHHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHc------CCCCCeEEEeCCH
Confidence 588887763 34678899999888754211 23443222 357888888887 3456689999999
Q ss_pred HHHHHHHHHHh---cCCCCEEEEcCCCCcchH----HHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCC
Q 014936 110 TQAIDVAMALL---SRPGANILLPRPGFPIYE----LSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINP 182 (415)
Q Consensus 110 ~~al~~~~~~l---~~~gd~vi~~~p~y~~~~----~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p 182 (415)
++++..++.++ .++||+|+++++.|.+.. ..++..|+++..++.+++ ++.++++++++.++++++++++++|
T Consensus 87 t~~l~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~~l~~~i~~~~~lv~i~~~ 165 (397)
T TIGR01976 87 TSLTFLLSRAISRRWGPGDEVIVTRLDHEANISPWLQAAERAGAKVKWARVDEA-TGELHPDDLASLLSPRTRLVAVTAA 165 (397)
T ss_pred HHHHHHHHHHHHhcCCCCCEEEEcCCchHhHHHHHHHHHHhcCCEEEEEecccc-CCCcCHHHHHHhcCCCceEEEEeCC
Confidence 99998877775 589999999999997643 456778999999987542 3568999999999888999999999
Q ss_pred CCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCC
Q 014936 183 GNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDP 262 (415)
Q Consensus 183 ~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~ 262 (415)
+||||.+.+ +++|+++|+++|+++++|+++.. +.....+..++. .+++.|++|++ |.|+|++++++
T Consensus 166 ~n~tG~~~~---~~~i~~~~~~~~~~~ivD~a~~~----~~~~~~~~~~~~---d~~~~s~~K~~---g~~~G~l~~~~- 231 (397)
T TIGR01976 166 SNTLGSIVD---LAAITELVHAAGALVVVDAVHYA----PHGLIDVQATGA---DFLTCSAYKFF---GPHMGILWGRP- 231 (397)
T ss_pred CCCCCccCC---HHHHHHHHHHcCCEEEEehhhhc----cccCCCHHHcCC---CEEEEechhhc---CCceEEEEEcH-
Confidence 999999964 78888888999999999999864 222222333332 26668999986 45689999865
Q ss_pred CCCCChHHHHHHHHhhcc-----------ccCCchhHHHHHH---HHhhCCCc-----------HHHHHHHHHHHHHHHH
Q 014936 263 CGMFRKPKVVERMKKYFD-----------ILGDPATFIQAAV---PSILQQPD-----------EVFFKKTLNLLKQSVD 317 (415)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~a~---~~~l~~~~-----------~~~~~~~~~~~~~~~~ 317 (415)
++++.+..... ..++++.....++ ...+.... ..++++..++..+.++
T Consensus 232 -------~~~~~l~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~ 304 (397)
T TIGR01976 232 -------ELLMNLPPYKLTFSYDTGPERFELGTPQYELLAGVVAAVDYLAGLGESANGSRRERLVASFQAIDAYENRLAE 304 (397)
T ss_pred -------HHHhhCCCccccCccCCCcchhcCCCCCHHHHHHHHHHHHHHHHhCcccccchhhhhhHHHHHHHHHHHHHHH
Confidence 45544433211 0123333333333 33332211 0135677788888999
Q ss_pred HHHHHhhcCCCCcCCCCC----CCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCC-----------CCCe
Q 014936 318 ICYNKIKEIPCISCPHKP----EGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVG-----------LKNW 382 (415)
Q Consensus 318 ~l~~~l~~~~~~~~~~~p----~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~-----------~~~~ 382 (415)
++.+.|++++++.++ .+ ..+.++.+.++. .+..++...| .++||.+..|..|. ..++
T Consensus 305 ~l~~~L~~~~~~~~~-~~~~~~~~~~~~~~~~~~------~~~~~l~~~L-~~~gI~v~~~~~~~~~~~~~~~~~~~~~~ 376 (397)
T TIGR01976 305 YLLVGLSDLPGVTLY-GVARLAARVPTVSFTVHG------LPPQRVVRRL-ADQGIDAWAGHFYAVRLLRRLGLNDEGGV 376 (397)
T ss_pred HHHHHHhcCCCEEEe-CCCCccCCCceEEEEeCC------cCHHHHHHHH-HHCCeEEEeCccchHHHHHHhCCCCCCCe
Confidence 999999888667743 33 134566655542 1345566655 67799999886653 2468
Q ss_pred EEEEee--CChhhHHHHHHHH
Q 014936 383 LRVTFA--VDPYSLEECLDRI 401 (415)
Q Consensus 383 iRi~~~--~~~~~l~~~l~~l 401 (415)
||||+. ++++|++.+++.|
T Consensus 377 iRis~~~~~t~~di~~l~~~l 397 (397)
T TIGR01976 377 VRVGLAHYNTAEEVDRLLEAL 397 (397)
T ss_pred EEEEeeccCCHHHHHHHHHhC
Confidence 999994 6889999988764
No 146
>PRK02948 cysteine desulfurase; Provisional
Probab=99.97 E-value=9.6e-29 Score=233.60 Aligned_cols=325 Identities=14% Similarity=0.080 Sum_probs=228.1
Q ss_pred CCCcHHHHHHHHHHHhcCCCCCCCC--------CCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhc-
Q 014936 51 FHTTHVATEAVAEALLSEKFNGYAP--------TAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLS- 121 (415)
Q Consensus 51 ~~~~~~~~~a~~~~~~~~~~~~y~~--------~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~- 121 (415)
.++++.+++++.+.+..... .+.. ..-..++|+.+|+++ ++++++|++++|+++++..++.++.
T Consensus 10 ~~~~~~v~~a~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~r~~la~~~------g~~~~~i~~~~g~t~a~~~~~~~~~~ 82 (381)
T PRK02948 10 TPMSKEALQTYQKAASQYFG-NESSLHDIGGTASSLLQVCRKTFAEMI------GGEEQGIYFTSGGTESNYLAIQSLLN 82 (381)
T ss_pred CCCCHHHHHHHHHHHHhcCC-CCccccHHHHHHHHHHHHHHHHHHHHh------CCCCCeEEEeCcHHHHHHHHHHHHHH
Confidence 35678899999887763211 1110 112457778888887 4578899999999999999888875
Q ss_pred ---CCCCEEEEcCCCCcchHH---HHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHH
Q 014936 122 ---RPGANILLPRPGFPIYEL---SAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHL 195 (415)
Q Consensus 122 ---~~gd~vi~~~p~y~~~~~---~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l 195 (415)
++|+.|+++...|+++.. .++..|+++..++.+. ++.+|++++++.++++++++++++|+||||.++| +
T Consensus 83 ~~~~~g~~vv~~~~~h~s~~~~~~~~~~~g~~v~~v~~~~--~~~~d~~~l~~~l~~~~~lv~~~~~~n~tG~~~~---~ 157 (381)
T PRK02948 83 ALPQNKKHIITTPMEHASIHSYFQSLESQGYTVTEIPVDK--SGLIRLVDLERAITPDTVLASIQHANSEIGTIQP---I 157 (381)
T ss_pred hccCCCCEEEECCcccHHHHHHHHHHHhCCCEEEEEeeCC--CCCCCHHHHHHhcCCCCEEEEEECCcCCcEeehh---H
Confidence 578999999977766544 4567799999998753 3568999999999888999999999999999965 6
Q ss_pred HHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHH-H
Q 014936 196 QKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVE-R 274 (415)
Q Consensus 196 ~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~-~ 274 (415)
++|.++|+++|+++++|+++.... ....+..++ ..+++.|+||.++.+| +|++++++...+. .... .
T Consensus 158 ~~I~~l~~~~~~~vivD~~~~~g~----~~~~~~~~~---~d~~~~s~~K~~gp~G--~G~l~~~~~~~~~---~~~~~~ 225 (381)
T PRK02948 158 AEIGALLKKYNVLFHSDCVQTFGK----LPIDVFEMG---IDSLSVSAHKIYGPKG--VGAVYINPQVRWK---PVFPGT 225 (381)
T ss_pred HHHHHHHHHcCCEEEEEChhhccc----cccCcccCC---CCEEEecHHhcCCCCc--EEEEEEcCCCCCC---CcccCC
Confidence 678888889999999998887632 122222333 3477889999988888 8998876532111 0000 0
Q ss_pred HHhhccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceE-----EEEecCccc
Q 014936 275 MKKYFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMA-----VMLKLNLSL 349 (415)
Q Consensus 275 ~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~-----~~~~l~~~~ 349 (415)
........++++.+.+.++.++++.. .+++++.+++++++++++.+.|+++ ++.+. ......+ +.+.++
T Consensus 226 ~~~~~~~~~t~~~~~~~a~~~al~~~-~~~~~~~~~~~~~~~~~l~~~L~~~-~~~v~-~~~~~~~~~~~i~~~~~~--- 299 (381)
T PRK02948 226 THEKGFRPGTVNVPGIAAFLTAAENI-LKNMQEESLRFKELRSYFLEQIQTL-PLPIE-VEGHSTSCLPHIIGVTIK--- 299 (381)
T ss_pred CCCCCcCCCCccHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhcC-CCCEE-EeCCCccCcCCEEEEEeC---
Confidence 00111124677888888888888653 2467888899999999999999988 55422 2111122 111222
Q ss_pred cCCCCCHHHHHHHHHhhcCeEEEcCCCCCC-------------------CCeEEEEee--CChhhHHHHHHHHHHHHHHH
Q 014936 350 LDDIIDDIDFCFKLAKEESVIILPGTAVGL-------------------KNWLRVTFA--VDPYSLEECLDRIKSFYQRH 408 (415)
Q Consensus 350 ~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~-------------------~~~iRi~~~--~~~~~l~~~l~~l~~~~~~~ 408 (415)
+. +..++...+ .++||.+.+|..|.. .+++|+|++ ++++|++.+++.|+++++++
T Consensus 300 --~~-~~~~~~~~l-~~~gI~v~~g~~c~~~~~~p~~~~~~~~~~~~~~~~~lRis~~~~~t~~di~~l~~~l~~~~~~~ 375 (381)
T PRK02948 300 --GI-EGQYTMLEC-NRRGIAISTGSACQVGKQEPSKTMLAIGKTYEEAKQFVRFSFGQQTTKDQIDTTIHALETIGNQF 375 (381)
T ss_pred --CC-CHHHHHHhc-ccCCEEEEchHhcCCCCCCCCHHHHHcCCChHHhCceEEEEcCCCCCHHHHHHHHHHHHHHHHHH
Confidence 11 345555554 677999998875421 368999995 68999999999999987765
Q ss_pred H
Q 014936 409 A 409 (415)
Q Consensus 409 ~ 409 (415)
.
T Consensus 376 ~ 376 (381)
T PRK02948 376 Y 376 (381)
T ss_pred h
Confidence 4
No 147
>cd06453 SufS_like Cysteine desulfurase (SufS)-like. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to cysteine desulfurase (SufS) and selenocysteine lyase. SufS catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine; and selenocysteine lyase catalyzes the decomposition of L-selenocysteine.
Probab=99.97 E-value=3.8e-28 Score=229.08 Aligned_cols=316 Identities=15% Similarity=0.191 Sum_probs=222.5
Q ss_pred CCCcHHHHHHHHHHHhcCCCC--CCC------CCCCcHHHHHHHHHHHhhhCCCCCC-CCcEEEeCChHHHHHHHHHHhc
Q 014936 51 FHTTHVATEAVAEALLSEKFN--GYA------PTAGLPLTRRAIAEYLSRDLPYKLT-PNDVFVTSGCTQAIDVAMALLS 121 (415)
Q Consensus 51 ~~~~~~~~~a~~~~~~~~~~~--~y~------~~~g~~~lr~~ia~~~~~~~~~~~~-~~~i~i~~g~~~al~~~~~~l~ 121 (415)
.++++.+.+++.+.+...... ... ......++|+.+++++ +.+ ++++++|+|+++++..++.++.
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~------~~~~~~~v~~~~g~t~a~~~~~~~l~ 82 (373)
T cd06453 9 SQKPQPVIDAIVDYYRHYNANVHRGVHELSARATDAYEAAREKVARFI------NAPSPDEIIFTRNTTEAINLVAYGLG 82 (373)
T ss_pred cCCCHHHHHHHHHHHHhcCCCCCCCccHHHHHHHHHHHHHHHHHHHHh------CCCCCCeEEEeCCHHHHHHHHHHHhh
Confidence 345688999998887532110 000 1123467888888888 345 6799999999999999999998
Q ss_pred C---CCCEEEEcCCCCcch----HHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHH
Q 014936 122 R---PGANILLPRPGFPIY----ELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQH 194 (415)
Q Consensus 122 ~---~gd~vi~~~p~y~~~----~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~ 194 (415)
. +||+|++++++|++. ...++..|++++.++.+ .++.+|++++++.+.++++++++++|+||||.+.+
T Consensus 83 ~~~~~g~~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~l~~~~~~v~~~~~~~~tG~~~~--- 157 (373)
T cd06453 83 RANKPGDEIVTSVMEHHSNIVPWQQLAERTGAKLKVVPVD--DDGQLDLEALEKLLTERTKLVAVTHVSNVLGTINP--- 157 (373)
T ss_pred hcCCCCCEEEECcchhHHHHHHHHHHHhhcCcEEEEeecC--CCCCcCHHHHHHHhcCCceEEEEeCcccccCCcCC---
Confidence 7 899999999999874 33445779999999875 34568999999999889999999999999999976
Q ss_pred HHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHHH
Q 014936 195 LQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVER 274 (415)
Q Consensus 195 l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~ 274 (415)
+++|.++|+++|+++++|++|+.... ...+...+. .+++.|++|.++. .++|++++++ ++++.
T Consensus 158 ~~~i~~~~~~~~~~li~D~a~~~~~~----~~~~~~~~~---d~~~~s~~K~~~~--~g~g~~~~~~--------~~~~~ 220 (373)
T cd06453 158 VKEIGEIAHEAGVPVLVDGAQSAGHM----PVDVQDLGC---DFLAFSGHKMLGP--TGIGVLYGKE--------ELLEE 220 (373)
T ss_pred HHHHHHHHHHcCCEEEEEhhhhcCce----eeeccccCC---CEEEeccccccCC--CCcEEEEEch--------HHhhc
Confidence 56788888899999999999875332 112222232 2666788999765 4589998865 34444
Q ss_pred HHhhcc---------------------c-cCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCC
Q 014936 275 MKKYFD---------------------I-LGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCP 332 (415)
Q Consensus 275 ~~~~~~---------------------~-~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~ 332 (415)
++.... + .++++.....++..+++...+..++...++.+++++++.+.|++++++.++
T Consensus 221 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~l~~~g~~~~~~~~~~~~~~l~~~l~~~~~~~~~ 300 (373)
T cd06453 221 MPPYGGGGEMIEEVSFEETTYADLPHKFEAGTPNIAGAIGLGAAIDYLEKIGMEAIAAHEHELTAYALERLSEIPGVRVY 300 (373)
T ss_pred CCCeecCCCccccccccccccCCCccccCCCCCCHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHhcCCCeEEe
Confidence 332210 0 123444445555555543323446777888889999999999998877743
Q ss_pred CCC-CCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCC--------CCCeEEEEee--CChhhHHHHHHHH
Q 014936 333 HKP-EGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVG--------LKNWLRVTFA--VDPYSLEECLDRI 401 (415)
Q Consensus 333 ~~p-~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~--------~~~~iRi~~~--~~~~~l~~~l~~l 401 (415)
..+ ..+.++++.++. .+..++.+.+ .++||.+.+|..|. .+++||++++ +++++++++++.|
T Consensus 301 ~~~~~~~~~~~~~~~~------~~~~~i~~~l-~~~gi~i~~g~~~~~~~~~~~~~~~~iRis~~~~~t~~di~~~~~~l 373 (373)
T cd06453 301 GDAEDRAGVVSFNLEG------IHPHDVATIL-DQYGIAVRAGHHCAQPLMRRLGVPGTVRASFGLYNTEEEIDALVEAL 373 (373)
T ss_pred CCccccCCeEEEEECC------cCHHHHHHHH-HHCCEEeccCccchhHHHHHhCCCCeEEEEecCCCCHHHHHHHHhhC
Confidence 111 234566666642 2455666655 56799998877542 3579999996 6899999998764
No 148
>PRK07049 methionine gamma-lyase; Validated
Probab=99.97 E-value=1.8e-27 Score=225.27 Aligned_cols=230 Identities=15% Similarity=0.171 Sum_probs=180.3
Q ss_pred CCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHH----HhCC
Q 014936 70 FNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSA----AFRH 145 (415)
Q Consensus 70 ~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~----~~~g 145 (415)
+.+|+++ ....|++.||++. ..+++++++||++++..++.+++++||+|+++.|+|+.+...+ ...|
T Consensus 77 y~R~~~P-t~~~Le~~lA~le--------g~~~~iv~~sG~~Ai~~~l~al~~~Gd~Vv~~~p~Y~~~~~~~~~~l~~~G 147 (427)
T PRK07049 77 YSRFNHP-NSEIVEDRLAVYE--------GAESAALFSSGMSAIATTLLAFVRPGDVILHSQPLYGGTETLLAKTFRNFG 147 (427)
T ss_pred ccCCCCc-CHHHHHHHHHHHh--------CCCcEEEEccHHHHHHHHHHHHhCCCCEEEEcCCCcccHHHHHHHHHHhcC
Confidence 4567764 5689999999997 3567899999999999999999999999999999999987654 4678
Q ss_pred CeEEEeeccCCCCCCCChhHHHhhcC-----CCceEEEecCCCCccccCCCHHHHHHHHHHHhh---cCcEEEEccccCC
Q 014936 146 IEVRHFDLLPDKGWEVDLDDIESLAD-----QNTVALVIINPGNPCGNVYSYQHLQKLAETANK---LKTLVIADEVYGH 217 (415)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~l~~~~~-----~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~---~~~~li~De~~~~ 217 (415)
++++.++. ..|.+.+++.+. +++++|++++|+||||.+++.+++.+|++.|.. +++++|+|++|..
T Consensus 148 i~~v~~~~------~~d~~~l~~~l~~~~~~~~tklv~lesP~NPtg~v~d~~~l~~la~~~~~~~~~~~~vvvDety~~ 221 (427)
T PRK07049 148 VGAVGFAD------GLSEAAIGAAAEAAAAKGRVSLILIETPANPTNSLVDVAAVRRVADAIEARQGHRPIIACDNTLLG 221 (427)
T ss_pred cEEEEEeC------CCCHHHHHHHHHhhccCCCceEEEEECCCCCCCcccCHHHHHHHHHHhhhcccCCCEEEEECCccc
Confidence 88666642 146677766553 478999999999999999999999999998754 6899999999865
Q ss_pred cccCCCCcccccccCCCCCeEEEccCccccC-CCCceEEEEEeeCCCCCCChHHHHHHHHhhcc-ccCCchhHHHHHHHH
Q 014936 218 LVFGDKPFVPMGVFGSTVPILTLGSLSKRWI-VPGWRLGWFVTTDPCGMFRKPKVVERMKKYFD-ILGDPATFIQAAVPS 295 (415)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~-~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~a~~~ 295 (415)
.... .++ ..+ ..+++.|+||.++ .+|+|+||+++++ ++++.+..... ...+.++..+.++..
T Consensus 222 ~~~~----~pl-~~g---~divv~S~SK~~gG~~glr~G~vv~~~--------~l~~~l~~~~~~~g~~ls~~~a~l~~r 285 (427)
T PRK07049 222 PVFQ----KPL-EHG---ADLSVYSLTKYVGGHSDLVAGAVLGRK--------ALIRQVRALRSAIGTQLDPHSCWMLGR 285 (427)
T ss_pred cccC----Ccc-ccC---CCEEEEcCceeecCCCCcEEEEEECCH--------HHHHHHHHHHHhcCCCCCHHHHHHHHc
Confidence 4321 122 122 3488889999998 5999999999754 57777766533 345678888888888
Q ss_pred hhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCC
Q 014936 296 ILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKP 335 (415)
Q Consensus 296 ~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p 335 (415)
.|+. +..+.++..++++.+.+.|++.|++..+.+|
T Consensus 286 ~L~t-----l~~R~~~~~~~a~~la~~L~~~p~V~~v~yp 320 (427)
T PRK07049 286 SLET-----LVLRMERANRNARAVAEFLRDHPKVEKLHYL 320 (427)
T ss_pred CCCh-----HHHHHHHHHHHHHHHHHHHHhCCCccEEECC
Confidence 8864 5666777799999999999998877655555
No 149
>COG0156 BioF 7-keto-8-aminopelargonate synthetase and related enzymes [Coenzyme metabolism]
Probab=99.97 E-value=8.1e-28 Score=219.59 Aligned_cols=329 Identities=17% Similarity=0.142 Sum_probs=252.8
Q ss_pred cCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcC------CCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEe
Q 014936 33 NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSE------KFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVT 106 (415)
Q Consensus 33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~------~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~ 106 (415)
++++++||+++| +.++..+|.++++..+.++.. .-.-++...-+.+|++.+|+|+ ..+..++.
T Consensus 37 ~~~~~~nf~SNd---YLGLa~~~~~~~a~~~~~~~~g~g~~gsR~i~G~~~~h~~LE~~lA~f~--------g~e~al~f 105 (388)
T COG0156 37 DGRKVLNFCSND---YLGLASHPELIEAAKAAIRRYGVGAGGSRLISGTSDLHVELEEELADFL--------GAEAALLF 105 (388)
T ss_pred CCceeEeeeccC---cccccCCHHHHHHHHHHHHHhCCCCCCcCcccCCcHHHHHHHHHHHHHh--------CCCcEEEE
Confidence 467899999999 778889999999999988752 1123455566789999999998 45677777
Q ss_pred CChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCC------CceEEEec
Q 014936 107 SGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ------NTVALVII 180 (415)
Q Consensus 107 ~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~------~~~~v~i~ 180 (415)
+++..++..++.++++++|.|+.+...|.+..+.++..+++++.+.+ .|+++|++.+++ +.+.|+..
T Consensus 106 ~SGy~AN~~~i~~l~~~~dli~~D~lnHASiidG~rls~a~~~~f~H-------nD~~~Le~~l~~~~~~~~~~~~Ivte 178 (388)
T COG0156 106 SSGFVANLGLLSALLKKGDLIFSDELNHASIIDGIRLSRAEVRRFKH-------NDLDHLEALLEEARENGARRKLIVTE 178 (388)
T ss_pred cccchhHHHHHHHhcCCCcEEEEechhhhhHHHHHHhCCCcEEEecC-------CCHHHHHHHHHhhhccCCCceEEEEe
Confidence 78888889999999999999999999999999999999999999887 378999888865 13444444
Q ss_pred CCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccC--CCCCeEEEccCccccCCCCceEEEEE
Q 014936 181 NPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFG--STVPILTLGSLSKRWIVPGWRLGWFV 258 (415)
Q Consensus 181 ~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~--~~~~~i~~~s~sK~~~~~G~r~G~~~ 258 (415)
..-...|.+ .++++|++++++|+.++++||+|+.++++..+......++ ..+..|.++||||+||..| ||+.
T Consensus 179 gVfSMdGdi---ApL~~l~~L~~ky~a~L~VDEAHa~Gv~G~~GrG~~e~~g~~~~~vdi~~gTlsKAlGs~G---g~v~ 252 (388)
T COG0156 179 GVFSMDGDI---APLPELVELAEKYGALLYVDEAHAVGVLGPNGRGLAEHFGLEPEEVDIIVGTLGKALGSSG---GYIA 252 (388)
T ss_pred ccccCCCCc---CCHHHHHHHHHHhCcEEEEEccccccccCCCCccHHHHhCCCCccceEEEEEchhhhcccC---ceee
Confidence 556778888 6689999999999999999999999999866555544443 3344799999999999988 9998
Q ss_pred eeCCCCCCChHHHHHHHHhhcc---ccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCC
Q 014936 259 TTDPCGMFRKPKVVERMKKYFD---ILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKP 335 (415)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p 335 (415)
++. .+++.+..... ++...+|....++...|+.. .....++++++++...+.+.++.. ++. + .+
T Consensus 253 g~~--------~~~d~L~~~ar~~ifStalpP~~aaa~~~al~~l--~~~~~~r~~L~~~~~~~~~~~~~~-~~~-~-~~ 319 (388)
T COG0156 253 GSA--------ALIDYLRNRARPFIFSTALPPAVAAAALAALRIL--EEGPERRERLQELAAFFRSLLKAL-GLV-L-LP 319 (388)
T ss_pred CcH--------HHHHHHHHhCCceeccCCCCHHHHHHHHHHHHHH--HhCHHHHHHHHHHHHHHHHHHHhc-CCc-c-CC
Confidence 865 67777766521 23445666556666666542 345678888999999998777666 665 3 56
Q ss_pred CCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCC---CCeEEEEe--eCChhhHHHHHHHHHHH
Q 014936 336 EGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGL---KNWLRVTF--AVDPYSLEECLDRIKSF 404 (415)
Q Consensus 336 ~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~---~~~iRi~~--~~~~~~l~~~l~~l~~~ 404 (415)
....++.+.+... ....++...++++ ||.+.+...+.. ...+|+++ .+++++++.+++.|.+.
T Consensus 320 s~s~I~pv~~gd~-----~~a~~~s~~l~~~-Gi~v~~i~~PTVp~gtarlRi~lta~ht~~~I~~l~~~l~~~ 387 (388)
T COG0156 320 SESPIIPVILGDE-----ERALEASRALLEE-GIYVSAIRPPTVPKGTARLRITLTAAHTEEDIDRLAEALSEV 387 (388)
T ss_pred CCCCeeeeEeCCH-----HHHHHHHHHHHHC-CeeEeeecCCCCCCCcceEEEEecCCCCHHHHHHHHHHHHhh
Confidence 6666776656432 1356677777666 999988777665 36899999 47899999999988764
No 150
>PRK09331 Sep-tRNA:Cys-tRNA synthetase; Provisional
Probab=99.97 E-value=1.5e-27 Score=225.04 Aligned_cols=338 Identities=12% Similarity=0.054 Sum_probs=228.6
Q ss_pred CcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCC-------CCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEe
Q 014936 34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEK-------FNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVT 106 (415)
Q Consensus 34 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~-------~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~ 106 (415)
++..||++--. .. .++++++.+++.+...... ...+.....+.++|+.+|++++ .++++++
T Consensus 17 ~~~~~~~~~~~---~~-~p~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~lA~~~g--------~~~~~~~ 84 (387)
T PRK09331 17 EEEFINLDPIQ---RG-GILTPEARKALIEYGDGYSVCDYCPGRLDQIKKPPIADFHEDLAEFLG--------MDEARVT 84 (387)
T ss_pred cccccccChhh---cC-CCCCHHHHHHHHHHHhccCCCcccccccccccChHHHHHHHHHHHHhC--------CCcEEEe
Confidence 45667775443 22 5678999999999874311 1112223357899999999982 3568899
Q ss_pred CChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCC-------CceEEEe
Q 014936 107 SGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ-------NTVALVI 179 (415)
Q Consensus 107 ~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~-------~~~~v~i 179 (415)
+|+++++.+++.++.++||+|+++.++|.+....++..|++++.+++..+.++.+|++.+++.+++ ++++|++
T Consensus 85 ~g~t~a~~~al~~l~~~gd~Vlv~~~~h~s~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lV~l 164 (387)
T PRK09331 85 HGAREGKFAVMHSLCKKGDYVVLDGLAHYTSYVAAERAGLNVREVPKTGYPEYKITPEAYAEKIEEVKEETGKPPALALL 164 (387)
T ss_pred CCHHHHHHHHHHHhcCCCCEEEECCCchHHHHHHHHHcCCEEEEEeCccCcCCCcCHHHHHHHHHHhhhccCCCCEEEEE
Confidence 999999999999999999999999999998888889999999999874334567899999998753 5789999
Q ss_pred cCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEe
Q 014936 180 INPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVT 259 (415)
Q Consensus 180 ~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~ 259 (415)
++|+|++|.. .++++|+++|+++|+++|+|++|+.... +.....++. .+++.|++|+++ ++.++||+++
T Consensus 165 ~~~~~~tG~~---~~l~~I~~la~~~g~~livD~a~~~g~~----~~~~~~~g~---D~~~~s~~K~l~-~~~~~G~l~~ 233 (387)
T PRK09331 165 THVDGNYGNL---ADAKKVAKVAHEYGIPFLLNGAYTVGRM----PVDGKKLGA---DFIVGSGHKSMA-ASAPSGVLAT 233 (387)
T ss_pred ECCCCCCccc---ccHHHHHHHHHHcCCEEEEECCcccCCc----CCCHHHcCC---CEEEeeCccccc-CCCCEEEEEE
Confidence 9999999988 5688899999999999999999986332 222223333 378899999975 4558999988
Q ss_pred eCCCCCCChHHHHHHHHhhcc---------ccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCc
Q 014936 260 TDPCGMFRKPKVVERMKKYFD---------ILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCIS 330 (415)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~ 330 (415)
++ ++++.+..... ...+..+....++...++.. .+.. +..++..++.+++.+.|++++|++
T Consensus 234 ~~--------~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aal~~~-~~~~-~~~~~~~~~~~~l~~~L~~l~g~~ 303 (387)
T PRK09331 234 TE--------EYADKVFRTSRKFGVKEVELLGCTLRGAPLVTLMASFPHV-VERV-KRWDEEVKKARWFVDELEKIEGFK 303 (387)
T ss_pred CH--------HHHhhcccccCCCcccceeeeceecCchHHHHHHHHHHHH-HHHH-HHHHHHHHHHHHHHHHHhcCCCEE
Confidence 65 55665543210 11112111222222233211 1222 234555677778999999998887
Q ss_pred CCCC-CCCceEEEEecCccc---cCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEe-eCChhhHHHHHHHHHHHH
Q 014936 331 CPHK-PEGSMAVMLKLNLSL---LDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTF-AVDPYSLEECLDRIKSFY 405 (415)
Q Consensus 331 ~~~~-p~~g~~~~~~l~~~~---~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~-~~~~~~l~~~l~~l~~~~ 405 (415)
++.. +....++.++.+... .....+..++...| +++||...+.. ....+|+.. +.++++++.+++.|++++
T Consensus 304 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~L-~~~gI~~~~~~---~~~i~ri~~~g~t~~di~~l~~aL~~i~ 379 (387)
T PRK09331 304 QLGEKPRNHDLMKFETPSFDEIAKKHKRRGFFLYEEL-KKRGIHGIKPG---ATKEFKLSTYGLTWEQVEYVADAFKEIA 379 (387)
T ss_pred EeccCcCcCCeEEEeCCchhHHhhhccccchhHHHHH-HHcCceEEccC---CceEEEEEeccCCHHHHHHHHHHHHHHH
Confidence 3311 333445555544100 00011234455555 66799854322 245678877 679999999999999887
Q ss_pred HHH
Q 014936 406 QRH 408 (415)
Q Consensus 406 ~~~ 408 (415)
+++
T Consensus 380 ~~~ 382 (387)
T PRK09331 380 EKY 382 (387)
T ss_pred Hhc
Confidence 653
No 151
>TIGR03403 nifS_epsilon cysteine desulfurase, NifS family, epsilon proteobacteria type. Members of this family are the NifS-like cysteine desulfurase of the epsilon division of the Proteobacteria, similar to the NifS protein of nitrogen-fixing bacteria. Like NifS, and unlike IscS, this protein is found as part of a system of just two proteins, a cysteine desulfurase and a scaffold, for iron-sulfur cluster biosynthesis. This protein is called NifS by Olsen, et al. (PubMed:11123951), so we use this designation.
Probab=99.97 E-value=2.7e-27 Score=223.71 Aligned_cols=331 Identities=11% Similarity=0.105 Sum_probs=234.1
Q ss_pred CCCcHHHHHHHHHHHhcCC-----CCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhc----
Q 014936 51 FHTTHVATEAVAEALLSEK-----FNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLS---- 121 (415)
Q Consensus 51 ~~~~~~~~~a~~~~~~~~~-----~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~---- 121 (415)
.++++.+++++.+.+.... ...|+. .+...++++++++... .+. .++++|++|+|+++++..++.++.
T Consensus 9 ~~~~~~v~~~~~~~~~~~~~n~~~~~~~~~-~~~~~l~~a~~~~~~~-~~~-~~~~~i~~t~g~teal~~~~~~~~~~~~ 85 (382)
T TIGR03403 9 TMLDPKVKELMDPFFCDIYGNPNSLHQFGT-ATHPAIAEALDKLYKG-INA-RDLDDIIITSCATESNNWVLKGVYFDEI 85 (382)
T ss_pred CCCCHHHHHHHHHHHHhcCcCCccccHHHH-HHHHHHHHHHHHHHHH-cCc-CCCCeEEEeCCHHHHHHHHHHHHHHhhc
Confidence 3457889999988876421 122332 3557888888887742 221 267899999999999999998762
Q ss_pred -CC-CCEEEEcCCCCcchHHH---HHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHH
Q 014936 122 -RP-GANILLPRPGFPIYELS---AAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQ 196 (415)
Q Consensus 122 -~~-gd~vi~~~p~y~~~~~~---~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~ 196 (415)
++ +++|+++...|+++... ++..|+++..++.++ ++.+|++.+++.++++++++++++|+||||.++| ++
T Consensus 86 ~~~~~~~vi~~~~e~ps~~~~~~~~~~~G~~v~~v~~~~--~g~~d~~~l~~~i~~~t~lv~~~~~~n~tG~~~~---~~ 160 (382)
T TIGR03403 86 LKGGKNHIITTEVEHPAVRATCAFLESLGVEVTYLPINE--QGTITAEQVREAITEKTALVSVMWANNETGMIFP---IK 160 (382)
T ss_pred ccCCCCEEEEcCCccHHHHHHHHHHHHCCCEEEEEecCC--CCCCCHHHHHHhcccCCeEEEEEcccCCCccccC---HH
Confidence 45 46899998777765443 566899999998753 3468999999999888999999999999999987 56
Q ss_pred HHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHH
Q 014936 197 KLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMK 276 (415)
Q Consensus 197 ~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~ 276 (415)
+|.++|+++|+++++|++++... .+..+...+.+ +++.|++|.++.+| +|++++++...+. |.+.....
T Consensus 161 ~I~~la~~~g~~~ivD~a~~~g~----~~~~~~~~~~D---~~~~s~~K~~gp~G--~g~l~vr~~~~~~--p~~~g~~~ 229 (382)
T TIGR03403 161 EIGEICKERGVLFHTDAVQAIGK----IPVDVQKAGVD---FLSFSAHKFHGPKG--VGGLYIRKGVELT--PLFHGGEH 229 (382)
T ss_pred HHHHHHHHcCCEEEEechhhcCC----CccCccccCCC---EEEEcchhhCCCCc--eEEEEECCCCCCC--CcccCCCC
Confidence 77888889999999999987522 22222223332 77789999887778 6888876532111 11110000
Q ss_pred hhccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCC---CceEEEEecCccccCCC
Q 014936 277 KYFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPE---GSMAVMLKLNLSLLDDI 353 (415)
Q Consensus 277 ~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~---~g~~~~~~l~~~~~~~~ 353 (415)
......++++...+.++..+++.. .++++...+++++.++++.+.|++++++.++ .+. .+.++.+.++. .
T Consensus 230 ~~~~~~gt~~~~~~~al~~al~~~-~~~~~~~~~~~~~l~~~l~~~L~~~~~~~~~-~~~~~~~~~~~~~~~~~-----~ 302 (382)
T TIGR03403 230 MGGRRSGTLNVPYIVAMGEAMRLA-NEYLDFEKSHVRRLRDRLEDALLELPDVFVV-GDREHRVPNTILISIKG-----V 302 (382)
T ss_pred CCCcccCCcChHHHHHHHHHHHHH-HHhHHHHHHHHHHHHHHHHHHHhcCCCEEEE-CCCCCCcCCEEEEEeCC-----C
Confidence 011124667888887888887542 3457777889999999999999988888743 332 13455555542 1
Q ss_pred CCHHHHHHHHHhhcCeEEEcCCCCCC-------------------CCeEEEEee--CChhhHHHHHHHHHHHHHHHH
Q 014936 354 IDDIDFCFKLAKEESVIILPGTAVGL-------------------KNWLRVTFA--VDPYSLEECLDRIKSFYQRHA 409 (415)
Q Consensus 354 ~~~~~~~~~ll~~~gi~v~~g~~~~~-------------------~~~iRi~~~--~~~~~l~~~l~~l~~~~~~~~ 409 (415)
+...+... |.++||.++.|..|.. .+.||+|+. ++++|++.+++.|++++++++
T Consensus 303 -~~~~~~~~-L~~~gI~v~~g~~c~~~~~~~~~v~~~~g~~~~~~~~~iR~s~~~~~t~~did~~~~~l~~~~~~~~ 377 (382)
T TIGR03403 303 -EGEAMLWD-LNKAGIAASTGSACASEDLEANPVMVAIGADKELAHTAIRLSLSRFTTEEEIDYTIEVFKKAVQRLR 377 (382)
T ss_pred -CHHHHHHh-hccCCEEEEchhccCCCCCCcCHHHHHcCCChHHhCeeEEEECCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 45566665 4678999998876631 257999994 689999999999999888754
No 152
>TIGR03402 FeS_nifS cysteine desulfurase NifS. Members of this protein family are NifS, one of several related families of cysteine desulfurase involved in iron-sulfur (FeS) cluster biosynthesis. NifS is part of the NIF system, usually associated with other nif genes involved in nitrogenase expression and nitrogen fixation. The protein family is given a fairly broad interpretation here. It includes a clade nearly always found in extended nitrogen fixation genomic regions, plus a second clade more closely related to the first than to IscS and also part of NifS-like/NifU-like systems. This model does not extend to a more distantly clade found in the epsilon proteobacteria such as Helicobacter pylori, also named NifS in the literature, built instead in TIGR03403.
Probab=99.96 E-value=1.9e-27 Score=224.63 Aligned_cols=326 Identities=13% Similarity=0.133 Sum_probs=226.4
Q ss_pred CCCcHHHHHHHHHHHhcCCCCCCCCC---------CCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhc
Q 014936 51 FHTTHVATEAVAEALLSEKFNGYAPT---------AGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLS 121 (415)
Q Consensus 51 ~~~~~~~~~a~~~~~~~~~~~~y~~~---------~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~ 121 (415)
.++++.+.+++.+.+.... .++.. .-..++|+.+++++ ++++++|++|+|++++++.++.++.
T Consensus 9 ~~~~~~v~~a~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~r~~la~~~------g~~~~~i~~t~~~t~a~~~al~~~~ 80 (379)
T TIGR03402 9 TRVDPEVLEAMLPYFTEYF--GNPSSMHSFGGEVGKAVEEAREQVAKLL------GAEPDEIIFTSGGTESDNTAIKSAL 80 (379)
T ss_pred CCCCHHHHHHHHHHHHhcC--CCCCcccHHHHHHHHHHHHHHHHHHHHh------CCCCCeEEEeCcHHHHHHHHHHHHH
Confidence 3557889999988875321 22211 12456677777777 4578899999999999999998764
Q ss_pred ---CCCCEEEEcCCCCcchHH---HHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHH
Q 014936 122 ---RPGANILLPRPGFPIYEL---SAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHL 195 (415)
Q Consensus 122 ---~~gd~vi~~~p~y~~~~~---~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l 195 (415)
.+|+.|+++..+|+++.. .+...|.++..++.+. ++.+|++++++.++++++++++++++||||.++| +
T Consensus 81 ~~~~~~~~vv~~~~~~~s~~~~~~~~~~~G~~v~~v~~~~--~g~~~~~~l~~~i~~~~~lv~i~~~~n~tG~~~~---~ 155 (379)
T TIGR03402 81 AAQPEKRHIITTAVEHPAVLSLCQHLEKQGYKVTYLPVDE--EGRLDLEELRAAITDDTALVSVMWANNETGTIFP---I 155 (379)
T ss_pred HhcCCCCeEEEcccccHHHHHHHHHHHHcCCEEEEEccCC--CCcCCHHHHHHhcCCCcEEEEEEcccCCeeeccc---H
Confidence 456899999988887543 3345799999988743 3468999999999989999999999999999977 4
Q ss_pred HHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHHHH
Q 014936 196 QKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERM 275 (415)
Q Consensus 196 ~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~ 275 (415)
++|.++|+++|+++++|++++. +..+..+...+.+ +++.|.+|.++.+| +|+++.++.... .|.+....
T Consensus 156 ~~I~~l~~~~g~~vivD~~~~~----g~~~~~~~~~~~D---~~~~s~~K~~gp~G--~g~l~v~~~~~~--~p~~~g~~ 224 (379)
T TIGR03402 156 EEIGEIAKERGALFHTDAVQAV----GKIPIDLKEMNID---MLSLSGHKLHGPKG--VGALYIRKGTRF--RPLLRGGH 224 (379)
T ss_pred HHHHHHHHHcCCEEEEECcccc----cccccCcccCCCC---EEEEcHHHcCCCCc--eEEEEECCCCCC--CCcccCCc
Confidence 6788889999999999999986 3333333333333 67778889776667 888877643211 11111100
Q ss_pred HhhccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhc-CCCCcCCCCCC---C-ceEEEEecCcccc
Q 014936 276 KKYFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKE-IPCISCPHKPE---G-SMAVMLKLNLSLL 350 (415)
Q Consensus 276 ~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~~~~~~~~~p~---~-g~~~~~~l~~~~~ 350 (415)
.......++++.....++.++++.. .++++...++.+++++.+.+.|.+ ++++.....+. . ...+|+ +.
T Consensus 225 ~~~~~~~gt~~~~~~~~l~~al~~~-~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~--~~--- 298 (379)
T TIGR03402 225 QERGRRAGTENVPGIVGLGKAAELA-TEHLEEENTRVRALRDRLEAGLLARIPDARLNGDPTKRLPNTVNISF--EY--- 298 (379)
T ss_pred cCCCcCCCCccHHHHHHHHHHHHHH-HHhHHHHHHHHHHHHHHHHHHHHhhCCCEEEeCCCccCCCCEEEEEe--cC---
Confidence 0111123556666666666666542 246777778899999999999985 77776332221 1 222333 21
Q ss_pred CCCCCHHHHHHHHHhhcCeEEEcCCCCCC-------------------CCeEEEEee--CChhhHHHHHHHHHHHHHHHH
Q 014936 351 DDIIDDIDFCFKLAKEESVIILPGTAVGL-------------------KNWLRVTFA--VDPYSLEECLDRIKSFYQRHA 409 (415)
Q Consensus 351 ~~~~~~~~~~~~ll~~~gi~v~~g~~~~~-------------------~~~iRi~~~--~~~~~l~~~l~~l~~~~~~~~ 409 (415)
.+..++... |.++||.+.+|..|.. .+.+|+|++ ++++|++++++.|++++++++
T Consensus 299 ---~~~~~~~~~-l~~~gI~v~~g~~c~~~~~~~~~~~~~lg~~~~~~~~~vR~S~~~~~t~~di~~~~~~l~~~~~~~~ 374 (379)
T TIGR03402 299 ---IEGEAILLL-LDMEGICASSGSACTSGSLEPSHVLRAMGVPHTAAHGSIRFSLSRYNTEEDIDYVLEVLPPIIARLR 374 (379)
T ss_pred ---CCHHHHHHh-hccCCEEEEchhhcCCCCCCcCHHHHHcCCChhhcCceEEEEcCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 145566554 4778999999987643 268999995 689999999999999988755
Q ss_pred H
Q 014936 410 K 410 (415)
Q Consensus 410 ~ 410 (415)
+
T Consensus 375 ~ 375 (379)
T TIGR03402 375 A 375 (379)
T ss_pred h
Confidence 3
No 153
>TIGR01977 am_tr_V_EF2568 cysteine desulfurase family protein. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family. Related families contain members active as cysteine desulfurases, selenocysteine lyases, or both. The members of this family form a distinct clade and all are shorter at the N-terminus. The function of this subfamily is unknown.
Probab=99.96 E-value=1.6e-27 Score=225.15 Aligned_cols=327 Identities=14% Similarity=0.107 Sum_probs=227.2
Q ss_pred CCCcHHHHHHHHHHHhcCC----CCCCCC----CCCcHHHHHHHHHHHhhhCCCCCC-CCcEEEeCChHHHHHHHHHHhc
Q 014936 51 FHTTHVATEAVAEALLSEK----FNGYAP----TAGLPLTRRAIAEYLSRDLPYKLT-PNDVFVTSGCTQAIDVAMALLS 121 (415)
Q Consensus 51 ~~~~~~~~~a~~~~~~~~~----~~~y~~----~~g~~~lr~~ia~~~~~~~~~~~~-~~~i~i~~g~~~al~~~~~~l~ 121 (415)
+++++.+.+++.+.++... ...|+. ..+..++|+.++++++ ++ .++|++++|+++++..++.++.
T Consensus 10 ~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~------~~~~~~v~~~~g~t~al~~~~~~~~ 83 (376)
T TIGR01977 10 YPKPDEVYEAMADFYKNYGGSPGRGRYRLALRASREVEETRQLLAKLFN------APSSAHVVFTNNATTALNIALKGLL 83 (376)
T ss_pred CCCCHHHHHHHHHHHHhcCCCCCcccchHHHHHHHHHHHHHHHHHHHhC------cCCCCeEEEeCCHHHHHHHHHHhcc
Confidence 5677899999988876422 112322 1456788999999883 33 3589999999999999999998
Q ss_pred CCCCEEEEcCCCCcchHH----HHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHH
Q 014936 122 RPGANILLPRPGFPIYEL----SAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQK 197 (415)
Q Consensus 122 ~~gd~vi~~~p~y~~~~~----~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~ 197 (415)
++||+|+++.++|+++.. .++..|.+++.++.+. ++.+|+++++++++++++++++++|+||||.+++ +++
T Consensus 84 ~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~~~~~~~~v~~~~~~n~tG~~~~---~~~ 158 (376)
T TIGR01977 84 KEGDHVITTPMEHNSVARPLECLKEQIGVEITIVKCDN--EGLISPERIKRAIKTNTKLIVVSHASNVTGTILP---IEE 158 (376)
T ss_pred CCCCEEEECcchhhHHHHHHHHHHHHcCcEEEEEecCC--CCCcCHHHHHHhcCCCCeEEEEECCCCCccccCC---HHH
Confidence 999999999999987643 4556699999888753 4568999999999888999999999999999987 567
Q ss_pred HHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHH-------
Q 014936 198 LAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPK------- 270 (415)
Q Consensus 198 i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~------- 270 (415)
|.++|+++|+++|+|++++.+.. ...+...+.+ +++.|++|+++.|. ..|+++.++......-..
T Consensus 159 i~~l~~~~~~~livD~a~~~g~~----~~~~~~~~~D---~~~~s~~K~l~~p~-g~g~l~~~~~~~~~~~~~~~~~~~~ 230 (376)
T TIGR01977 159 IGELAQENGIFFILDAAQTAGVI----PIDMTELAID---MLAFTGHKGLLGPQ-GTGGLYIREGIKLKPLKSGGTGSHS 230 (376)
T ss_pred HHHHHHHcCCEEEEEhhhccCcc----CCCchhcCCC---EEEecccccccCCC-CceEEEEcCCcCcCceecCCCcccc
Confidence 78888999999999999987442 2222222332 77889999865432 267776655321100000
Q ss_pred -HHHHHHh--hccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCC----CceEEEE
Q 014936 271 -VVERMKK--YFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPE----GSMAVML 343 (415)
Q Consensus 271 -~~~~~~~--~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~----~g~~~~~ 343 (415)
....... .....++++.....++.++++...+...+...++.+++.+++.+.|.+++++..+ .|. .+..+++
T Consensus 231 ~~~~~~~~~~~r~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~l~~~~~~~l~~~~~~~~~-~~~~~~~~~~~v~~ 309 (376)
T TIGR01977 231 ALIDQPSELPDRFESGTLNTPGIAGLNAGIKFIEKIGIANIAKKECMLTEKLLNGLREINKVKIY-GPADPANRVGVVSF 309 (376)
T ss_pred ccccccccchhhccCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCeEEe-CCCCccccCCeEEE
Confidence 0000000 0011234555556666666654333456677888899999999999988777743 321 2445666
Q ss_pred ecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCC----------CCCeEEEEee--CChhhHHHHHHHHHH
Q 014936 344 KLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVG----------LKNWLRVTFA--VDPYSLEECLDRIKS 403 (415)
Q Consensus 344 ~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~----------~~~~iRi~~~--~~~~~l~~~l~~l~~ 403 (415)
.++. .+..++...+.+++||.+.+|..|. ..+.||+++. .++++++.+++.|++
T Consensus 310 ~~~~------~~~~~~~~~L~~~~gi~v~~g~~~~~~~~~~~g~~~~~~iRis~~~~~t~~dv~~~~~~l~~ 375 (376)
T TIGR01977 310 TVEG------IDSEEVADILDEKFDIATRTGLHCAPLAHKTIGTFATGTIRLSLGYFNTEEEIEKLLEALSE 375 (376)
T ss_pred EECC------CCHHHHHHHHhccCCEEEEcccccchHHHHHhCCCCCCeEEEecCCCCCHHHHHHHHHHHhh
Confidence 6642 2456666666555599999887653 2478999994 689999999999875
No 154
>PLN02409 serine--glyoxylate aminotransaminase
Probab=99.96 E-value=3.3e-27 Score=223.45 Aligned_cols=325 Identities=14% Similarity=0.094 Sum_probs=238.4
Q ss_pred CCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEc
Q 014936 51 FHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLP 130 (415)
Q Consensus 51 ~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~ 130 (415)
...++++++++..... .|.. .+..++++.+.+.+++.+|.. ..+.+++++++++++..++..+.++||+|+++
T Consensus 18 ~~~~~~V~~a~~~~~~-----~~~~-~~~~~~~~~~~~~l~~~~g~~-~~~~vi~~~~gt~a~~~a~~~~~~~Gd~Vlv~ 90 (401)
T PLN02409 18 VNIPERVLRAMNRPNE-----DHRS-PAFPALTKELLEDVKYIFKTK-SGTPFIFPTTGTGAWESALTNTLSPGDKVVSF 90 (401)
T ss_pred CCCCHHHHHHhcCCCC-----CCCC-HHHHHHHHHHHHHHHHHhCCC-CCCEEEEeCCcHHHHHHHHHhcCCCCCEEEEe
Confidence 3456778777755332 2222 356778888888887777743 23467889999999999999999999999999
Q ss_pred CCCCcch--HHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCC----CceEEEecCCCCccccCCCHHHHHHHHHHHhh
Q 014936 131 RPGFPIY--ELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ----NTVALVIINPGNPCGNVYSYQHLQKLAETANK 204 (415)
Q Consensus 131 ~p~y~~~--~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~----~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~ 204 (415)
++.|++. ...++..|++++.++.+.+ ..++++++++.+++ +++++++++++||||.++|.+++.++++ |++
T Consensus 91 ~~~~~~~~~~~~~~~~g~~v~~v~~~~~--~~~~~~~l~~~l~~~~~~~~k~v~~~~~~~~tG~~~~~~~i~~l~~-~~~ 167 (401)
T PLN02409 91 RIGQFSLLWIDQMQRLNFDVDVVESPWG--QGADLDILKSKLRQDTNHKIKAVCVVHNETSTGVTNDLAGVRKLLD-CAQ 167 (401)
T ss_pred CCCchhHHHHHHHHHcCCceEEEECCCC--CCCCHHHHHHHHhhCcCCCccEEEEEeecccccccCCHHHHHHHHh-hhc
Confidence 9999765 4667888999999987543 34789999999875 6899999999999999998777777766 999
Q ss_pred cCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhhc-----
Q 014936 205 LKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYF----- 279 (415)
Q Consensus 205 ~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~----- 279 (415)
+|+++++|++++. +..+..+..++.+ +++.|.+|++++|. ++||++.++ +.++++....
T Consensus 168 ~g~~~vvD~v~s~----g~~~id~~~~~~D---~~~~s~~K~l~~P~-G~G~l~~~~--------~~~~~~~~~~~~~~~ 231 (401)
T PLN02409 168 HPALLLVDGVSSI----GALDFRMDEWGVD---VALTGSQKALSLPT-GLGIVCASP--------KALEASKTAKSPRVF 231 (401)
T ss_pred cCcEEEEEccccc----CCccccccccCcc---EEEEcCccccCcCC-CcceeEECH--------HHHHHHhcCCCCCee
Confidence 9999999999985 2222233333333 66777799975533 599999865 3444443210
Q ss_pred -------------cc-cCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCC----CceEE
Q 014936 280 -------------DI-LGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPE----GSMAV 341 (415)
Q Consensus 280 -------------~~-~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~----~g~~~ 341 (415)
.. ..+++...+.++.++++...+..+++..++++++++++.+.|+.+ +++++ .+. .+...
T Consensus 232 ~~~~~~~~~~~~g~~~~~Tp~~~~~~al~~al~~~~~~G~e~i~~~~~~l~~~l~~~L~~~-g~~~~-~~~~~~~s~~v~ 309 (401)
T PLN02409 232 FDWADYLKFYKLGTYWPYTPSIQLLYGLRAALDLIFEEGLENVIARHARLGEATRLAVEAW-GLKLC-TKKPEWRSDTVT 309 (401)
T ss_pred cCHHHHHHHHhcCCCCCCCccHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHc-CCeec-cCChhhcccceE
Confidence 01 235666667777777765445668888999999999999999887 77744 332 22345
Q ss_pred EEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEe-e-CChhhHHHHHHHHHHHHHHH
Q 014936 342 MLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTF-A-VDPYSLEECLDRIKSFYQRH 408 (415)
Q Consensus 342 ~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~-~-~~~~~l~~~l~~l~~~~~~~ 408 (415)
++.++.. .+..++...+++++||.+.+|........|||+. + .+.+++..++..|++++.+.
T Consensus 310 ~~~~p~~-----~~~~~l~~~l~~~~~i~i~~G~~~~~~~~~Rig~~g~~~~~~~~~~~~~~~~~l~~~ 373 (401)
T PLN02409 310 AVVVPEG-----IDSAEIVKNAWKKYNLSLGLGLNKVAGKVFRIGHLGNVNELQLLGALAGVEMVLKDV 373 (401)
T ss_pred EEeCCCC-----CCHHHHHHHHHHhCCEEEEcCCCcccCCEEEEcCCCCCCHHHHHHHHHHHHHHHHHc
Confidence 5666532 2566777888888999999887654468999999 3 58899999999999988764
No 155
>PRK02936 argD acetylornithine aminotransferase; Provisional
Probab=99.96 E-value=3.8e-27 Score=222.31 Aligned_cols=335 Identities=17% Similarity=0.160 Sum_probs=230.0
Q ss_pred ccCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHH
Q 014936 32 KNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQ 111 (415)
Q Consensus 32 ~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~ 111 (415)
.+|+.++||..|......+. .+|.+.+++.++++.... .+. ....++++.+++++.+..+ .+.+++++++++
T Consensus 26 ~~G~~~lD~~s~~~~~~lG~-~~p~v~~a~~~~~~~~~~--~~~-~~~~~~~~~la~~l~~~~~----~~~~~~~~sG~~ 97 (377)
T PRK02936 26 NNGKTYLDFTSGIAVCNLGH-CHPTVTKAVQEQLDDIWH--VSN-LFTNSLQEEVASLLAENSA----GDLVFFCNSGAE 97 (377)
T ss_pred CCCCEEEECCcchhhccCCC-CCHHHHHHHHHHHHhccc--ccc-ccCCHHHHHHHHHHHhcCC----CCEEEEeCCcHH
Confidence 35889999999974433333 679999999999875321 222 3456899999999976332 358999999999
Q ss_pred HHHHHHHHhc-CCC-CEEEEcCCCCcchHHHH-HhCCCeEE---EeeccCCCCC--CCChhHHHhhcCCCceEEEecCCC
Q 014936 112 AIDVAMALLS-RPG-ANILLPRPGFPIYELSA-AFRHIEVR---HFDLLPDKGW--EVDLDDIESLADQNTVALVIINPG 183 (415)
Q Consensus 112 al~~~~~~l~-~~g-d~vi~~~p~y~~~~~~~-~~~g~~~~---~~~~~~~~~~--~~~~~~l~~~~~~~~~~v~i~~p~ 183 (415)
++..+++... .+| +.|++.+++|++..... ...+.... ..+..++..+ ..|++.+++.+.++++++++..++
T Consensus 98 a~~~A~~~a~~~~g~~~vi~~~~~~Hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~ii~e~i~ 177 (377)
T PRK02936 98 ANEAALKLARKHTGKSKIVTFEQSFHGRTFGTMSATGQEKIKEGFGPLLPGFTHVPFNDIKALKEVMNEEVAAVMLEVVQ 177 (377)
T ss_pred HHHHHHHHHHHhcCCCeEEEECCCcCCCcHHhhhccCCccccccCCCCCCCceEeCCCCHHHHHHhccCCeEEEEEeccc
Confidence 9999998643 234 57999999888644332 22221110 0111000000 027899999998788888887778
Q ss_pred CccccC-CCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCC
Q 014936 184 NPCGNV-YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDP 262 (415)
Q Consensus 184 nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~ 262 (415)
+++|.. .+.+.+++|.++|++||+++|+||+|.++.+.+... .+..++....+ .++||.++ +|+|+||+++++
T Consensus 178 ~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DEv~~g~g~~g~~~-~~~~~~~~~di---~t~sK~l~-~G~~ig~v~~~~- 251 (377)
T PRK02936 178 GEGGVIPADPAFLQEVQTLCKKFGALLIIDEVQTGIGRTGTLF-AYEQFGLDPDI---VTVAKGLG-NGIPVGAMIGKK- 251 (377)
T ss_pred CCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCchhh-HHHhhCCCCcE---EEEccccc-CCCccEEEEEcH-
Confidence 888876 588999999999999999999999998876665422 22223222223 37899987 899999999865
Q ss_pred CCCCChHHHHHHHHhhc-cccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhc----CCCCcCCCCCCC
Q 014936 263 CGMFRKPKVVERMKKYF-DILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKE----IPCISCPHKPEG 337 (415)
Q Consensus 263 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~----~~~~~~~~~p~~ 337 (415)
++.+.+.... ..+.+.+++.|.++.++|+... .++..++++++.+++.+.|++ ++.+. . ....
T Consensus 252 -------~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~~~---~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~-~-v~~~ 319 (377)
T PRK02936 252 -------ELGTAFGPGSHGSTFGGNPLAMAAAKEVLQVIK---QPSFLEEVQEKGEYFLQKLQEELEHLECVK-N-IRGK 319 (377)
T ss_pred -------HHHhhccCCCCCCCCCCCHHHHHHHHHHHHHHH---hccHHHHHHHHHHHHHHHHHHHHhhCCcEE-e-Eeec
Confidence 5777765432 2345679999999999986531 123445666666666666654 33322 1 2345
Q ss_pred ceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEe--eCChhhHHHHHHHHHHH
Q 014936 338 SMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTF--AVDPYSLEECLDRIKSF 404 (415)
Q Consensus 338 g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~--~~~~~~l~~~l~~l~~~ 404 (415)
|+++|+.++. +...+.. .+.++||.+.|+. .+++|+++ ..+++++++++++|.++
T Consensus 320 g~~~~i~~~~-------~~~~~~~-~l~~~gv~v~~~g----~~~lRi~p~~~~~~~~i~~~i~~l~~~ 376 (377)
T PRK02936 320 GLMIGIECTE-------EVAPVIE-QLREEGLLVLSAG----PNVIRLLPPLVVTKEELDQAVYLLKKV 376 (377)
T ss_pred ceEEEEEecc-------hHHHHHH-HHHHCCeEEecCC----CCEEEEECCcccCHHHHHHHHHHHHHh
Confidence 7889998863 2344444 5577899998853 47999996 57899999999999875
No 156
>PF12897 Aminotran_MocR: Alanine-glyoxylate amino-transferase; InterPro: IPR024551 This entry represents a family of putative aminotransferases.; PDB: 3D6K_C 3EZ1_A 3PPL_B.
Probab=99.96 E-value=4.3e-28 Score=213.18 Aligned_cols=366 Identities=19% Similarity=0.272 Sum_probs=221.3
Q ss_pred hHHHHHHHhhhcccccccCcceeEecccCCCCCCCCCCcHHHHHHHHHH--H-hcCCCCCC-CCCCCcHHHHHHHHHHHh
Q 014936 16 TIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEA--L-LSEKFNGY-APTAGLPLTRRAIAEYLS 91 (415)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~--~-~~~~~~~y-~~~~g~~~lr~~ia~~~~ 91 (415)
.+.+...++.++|+.-+...=-+||+-|.|+... +.....+....... . ...+.-+| +...|++++|+.+|+.+
T Consensus 5 eL~~~~~~l~~~y~~~ka~~L~LdmtRGKPs~eQ-LdLS~~lL~~~~~~~~~~dG~D~RNY~G~l~Gipe~r~l~a~ll- 82 (425)
T PF12897_consen 5 ELAALLAELRKQYEELKAKGLKLDMTRGKPSPEQ-LDLSNPLLDLPGSSDYLADGTDCRNYPGGLDGIPEARELFAELL- 82 (425)
T ss_dssp -HHHCHHHHHHHHHHHHHTT--EES---S--HHH-HHGGGGGGGSSTTCCBECTTEBTTSS-S-SS--HHHHHHHHHHH-
T ss_pred HHHHHHHHHHHHHHHHHHcCCCcccCCCCCCHHH-HhhhHHHhcCCCCccccCCCccccCCCCccCChHHHHHHHHHHh-
Confidence 3444445555555433445556899999875221 11111121111110 0 01134589 88899999999999999
Q ss_pred hhCCCCCCCCcEEEeCChHHHHHHHH--HHh----cC--------CCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCC
Q 014936 92 RDLPYKLTPNDVFVTSGCTQAIDVAM--ALL----SR--------PGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDK 157 (415)
Q Consensus 92 ~~~~~~~~~~~i~i~~g~~~al~~~~--~~l----~~--------~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~ 157 (415)
++++++|++..+++-.++--. .++ .+ +.-+.+++.|+|..++..++.+|++.+.||..++
T Consensus 83 -----gv~~~~viv~gNSSL~lM~d~i~~a~~~G~~~~~~PW~~~~~vKfLCPvPGYDRHFai~E~~Giemi~VpM~~d- 156 (425)
T PF12897_consen 83 -----GVPPENVIVGGNSSLNLMHDTISRAMLHGVPGSETPWCKEEKVKFLCPVPGYDRHFAITEHFGIEMIPVPMTED- 156 (425)
T ss_dssp -----TS-GGGEEE-SS-HHHHHHHHHHHHHHH--TT-SS-GGGSS--EEEEEES--HHHHHHHHHCT-EEEEEEEETT-
T ss_pred -----CCCHHHEEEeccchHHHHHHHHHHHHhcCCCCCCCCchhccCceEEecCCCchHHHHHHHhhCcEEEecCCCCC-
Confidence 789999999888765543222 221 11 1237899999999999999999999999998643
Q ss_pred CCCCChhHHHhhcCC-CceEEEecCC--CCccccCCCHHHHHHHHHH-HhhcCcEEEEccccCCcccCCC-Cccc---c-
Q 014936 158 GWEVDLDDIESLADQ-NTVALVIINP--GNPCGNVYSYQHLQKLAET-ANKLKTLVIADEVYGHLVFGDK-PFVP---M- 228 (415)
Q Consensus 158 ~~~~~~~~l~~~~~~-~~~~v~i~~p--~nptG~~~~~~~l~~i~~~-~~~~~~~li~De~~~~~~~~~~-~~~~---~- 228 (415)
++|++.+++++.+ .....++|.| +||||+++|.+..++++++ +...+..|+.|++|....+.+. .... +
T Consensus 157 --GPDmD~Ve~LV~~D~svKGiWcVP~ySNPtG~tySde~vrrlA~m~~AA~DFRI~WDNAY~vHhL~~~~~~~~~~nil 234 (425)
T PF12897_consen 157 --GPDMDMVEELVAEDPSVKGIWCVPKYSNPTGITYSDEVVRRLAAMKTAAPDFRIFWDNAYAVHHLYDEEPRDALLNIL 234 (425)
T ss_dssp --EE-HHHHHHHTHTSTTEEEEEE-SSS-TTT-----HHHHHHHHHS--SSTT-EEEEE-TTTT-BSSSSSS------HH
T ss_pred --CCCHHHHHHHHhcCCccceEEeCCCccCCCCccCCHHHHHHHhcCCcCCcCeEEEeecCceEeeccccccchhhhHHH
Confidence 5899999998843 3445577777 8999999999999999998 3467999999999998776322 2111 1
Q ss_pred ---cccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhh-ccccCCchhHHHHHHHHhhCCCc---
Q 014936 229 ---GVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKY-FDILGDPATFIQAAVPSILQQPD--- 301 (415)
Q Consensus 229 ---~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~a~~~~l~~~~--- 301 (415)
...+..++++.+.|+||. ..+|-.++++.++. +-++.+... ...+.++..+.|..-.+++.+..
T Consensus 235 ~~~~~AGnpdrv~~F~STSKI-Tf~GaGva~~aaS~--------~Nl~~~~~~~~~~tIgpdKvNQLRHvrff~d~~gGv 305 (425)
T PF12897_consen 235 DACAKAGNPDRVYVFASTSKI-TFPGAGVAFFAASE--------ANLAWIKKHLSVQTIGPDKVNQLRHVRFFKDAEGGV 305 (425)
T ss_dssp HHHHHTT-TTSEEEEEESTTT-S-TTSS-EEEEE-H--------HHHHHHHHHHHHH-S---HHHHHHHHHHHHSHHTHH
T ss_pred HHHHHcCCCCeEEEEeccccc-ccCCcceeeeecCH--------HHHHHHHHHhcCceeCccHHHHHHHHHHhcChhhHH
Confidence 223556789999999999 89999999999975 455555554 34467889999999999998743
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhc-CC---CCcCCCCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEc-CCC
Q 014936 302 EVFFKKTLNLLKQSVDICYNKIKE-IP---CISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILP-GTA 376 (415)
Q Consensus 302 ~~~~~~~~~~~~~~~~~l~~~l~~-~~---~~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~-g~~ 376 (415)
..+++++.+.++-+.+...+.|++ +. ++..+..|.+|+|++++... .....+.+++++.||.+.| |..
T Consensus 306 ~aHM~kHa~il~PKF~~V~~~L~~~L~~~~~ia~Wt~P~GGYFIsld~~~-------G~AkrvV~lakeAGV~LT~AGAt 378 (425)
T PF12897_consen 306 RAHMRKHAAILRPKFEAVLEILEEELGDGLGIASWTKPKGGYFISLDVLD-------GTAKRVVELAKEAGVALTPAGAT 378 (425)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHGTGGTSEEE---SBSS-EEEEEST-------T-HHHHHHHHHHTTEE---TTTT
T ss_pred HHHHHHHHHHHhhhHHHHHHHHHHhcCCCCCeeEecCCCCceEEEEecCC-------ChHHHHHHHHHHhCceeCCCCCC
Confidence 467777888888777777777764 43 45447799999999998864 2344556677999999998 555
Q ss_pred CCC-----CCeEEEEeeC-ChhhHHHHHHHHHHHHHH
Q 014936 377 VGL-----KNWLRVTFAV-DPYSLEECLDRIKSFYQR 407 (415)
Q Consensus 377 ~~~-----~~~iRi~~~~-~~~~l~~~l~~l~~~~~~ 407 (415)
|-. +..|||+.+. +.++++.+++.+.-.++-
T Consensus 379 fPyg~DP~D~nIRiAPS~P~leel~~Am~~~~~cv~l 415 (425)
T PF12897_consen 379 FPYGKDPRDSNIRIAPSYPSLEELETAMDVFATCVKL 415 (425)
T ss_dssp SGGG--TTS-EEEE--SSS-HHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCcEEecCCCCCHHHHHHHHHHHHHHHHH
Confidence 532 5789999986 569999999999877664
No 157
>TIGR03301 PhnW-AepZ 2-aminoethylphosphonate aminotransferase. This family includes a number of 2-aminoethylphosphonate aminotransferases, some of which are indicated to operate in the catabolism of 2-aminoethylphosphonate (AEP) and others which are involved in the biosynthesis of the same compound. The catabolic enzyme (PhnW, ) is known to use pyruvate:alanine as the transfer partner and is modeled by the equivalog-level alignment (TIGR02326). The PhnW family is apparently a branch of a larger tree including genes (AepZ) adjacent to others responsible for the biosynthesis of phosphonoacetaldehyde. The identity of the transfer partner is unknown for these enzymes and considering the reversed flux compared to PhnW, it may very well be different.
Probab=99.96 E-value=5.6e-27 Score=219.86 Aligned_cols=317 Identities=15% Similarity=0.147 Sum_probs=220.9
Q ss_pred CCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCC--cEEEeCChHHHHHHHHHHhcCCCCEEE
Q 014936 51 FHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPN--DVFVTSGCTQAIDVAMALLSRPGANIL 128 (415)
Q Consensus 51 ~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~--~i~i~~g~~~al~~~~~~l~~~gd~vi 128 (415)
..+++.+++++...... ....|. .-..++|+.+++++ +++++ .|++++|+++++..++.++..+||+++
T Consensus 8 ~~~~~~~~~~~~~~~~~-~~~~~~--~~~~~~~~~la~~~------~~~~~~~~i~~~~~gt~~l~~~~~~~~~~~~~vi 78 (355)
T TIGR03301 8 LSTSATVRDAMLVDWCH-WDSEFN--DVTDQVRDRLLALA------GGDDNHTCVLLQGSGTFAVEATIGSLVPRDGKLL 78 (355)
T ss_pred CCCCHHHHHHhhhhccC-CCHHHH--HHHHHHHHHHHHHh------cCCCCCcEEEEeCCcHHHHHHHHHhccCCCCeEE
Confidence 45678888888773321 111233 23567777787777 33443 678899999999999999998888877
Q ss_pred EcCCCCcc--hHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCC--CceEEEecCCCCccccCCCHHHHHHHHHHHhh
Q 014936 129 LPRPGFPI--YELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ--NTVALVIINPGNPCGNVYSYQHLQKLAETANK 204 (415)
Q Consensus 129 ~~~p~y~~--~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~ 204 (415)
+..+.+++ +...++..|.++..++.+. ++.+|++++++.+++ +.+.+++++++||||...+ +++|+++|++
T Consensus 79 ~~~~~~~~~~~~~~a~~~g~~~~~i~~~~--~~~~d~~~l~~~l~~~~~~~~v~~~~~~~~~G~~~~---~~~i~~l~~~ 153 (355)
T TIGR03301 79 VLINGAYGERLAKICEYLGIPHTDLNFSE--YEPPDLNRIEEALAADPDITHVATVHHETTTGILNP---LEAIAKVARS 153 (355)
T ss_pred EECCCchhhHHHHHHHHcCCceEEEecCC--CCCCCHHHHHHHHHhCCCceEEEEEecCCcccchhH---HHHHHHHHHH
Confidence 66665544 4566788999999888643 456899999998864 4567778899999999954 7889999999
Q ss_pred cCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCcccc-CCCCceEEEEEeeCCCCCCChHHHHHHHHhh-----
Q 014936 205 LKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRW-IVPGWRLGWFVTTDPCGMFRKPKVVERMKKY----- 278 (415)
Q Consensus 205 ~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~-~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~----- 278 (415)
+|+++|+|++++.+. ...++..++. .++++|++|++ +++| +||+++++ ++++.+...
T Consensus 154 ~~~~livD~~~s~g~----~~~~~~~~~~---d~~~~s~~K~l~~~~G--~g~~~~~~--------~~~~~~~~~~~~~~ 216 (355)
T TIGR03301 154 HGAVLIVDAMSSFGA----IPIDIEELDV---DALIASANKCLEGVPG--FGFVIARR--------DLLEASAGNARSLY 216 (355)
T ss_pred cCCEEEEEeccccCC----cccchhhcCc---cEEEecCCcccccCCc--eeEEEECH--------HHHHHhhCCCCCce
Confidence 999999999887632 2223333332 37889999985 4556 79999865 455554411
Q ss_pred -------------ccccCCchhHHHHHHHHhhCCCcHH-HHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCC--CCceEEE
Q 014936 279 -------------FDILGDPATFIQAAVPSILQQPDEV-FFKKTLNLLKQSVDICYNKIKEIPCISCPHKP--EGSMAVM 342 (415)
Q Consensus 279 -------------~~~~~~~~~~~~~a~~~~l~~~~~~-~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p--~~g~~~~ 342 (415)
....++++...+.++..+++...++ ++++..++++++++++.+.|+++ ++.++..+ .++.++|
T Consensus 217 ~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~~~~~L~~~-g~~~~~~~~~~~~~~~~ 295 (355)
T TIGR03301 217 LDLYDQWAYMEKTGKWRFTPPTHTVYAFAQALEELEAEGGVPARIARYRRNRELLVDGLRAL-GFQPLLPERWQSPIIVS 295 (355)
T ss_pred eeHHHHHHHhhhcCCCCCCCcHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHc-CCeeecCCCCCCCcEEE
Confidence 0112356667777766666543223 36778889999999999999887 66633222 2355677
Q ss_pred EecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEee--CChhhHHHHHHHHHHH
Q 014936 343 LKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFA--VDPYSLEECLDRIKSF 404 (415)
Q Consensus 343 ~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~--~~~~~l~~~l~~l~~~ 404 (415)
+.++... . .+..++... +.++||.+.+|..+.. +++||++. .++++++.+++.|+++
T Consensus 296 ~~~~~~~--~-~~~~~~~~~-l~~~gi~i~~~~~~~~-~~iRis~~~~~~~~~i~~~~~~l~~~ 354 (355)
T TIGR03301 296 FLYPDDP--D-FDFDDFYQE-LKERGFVIYPGKLTLA-DTFRIGTIGEIDAADIERLLEAIKDA 354 (355)
T ss_pred EECCCCC--c-chHHHHHHH-HHHCCEEEECCccccc-cEEEEecCCCCCHHHHHHHHHHHHhh
Confidence 7776311 0 123455555 4677999999875543 79999983 5899999999999865
No 158
>PRK05093 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; Reviewed
Probab=99.96 E-value=6.4e-27 Score=222.11 Aligned_cols=336 Identities=18% Similarity=0.167 Sum_probs=225.0
Q ss_pred ccCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCC-CCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChH
Q 014936 32 KNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKF-NGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCT 110 (415)
Q Consensus 32 ~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~-~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~ 110 (415)
.+|+.++||..|.-....+. .+|.+.+++.+.+++... .......-..++.+.++++. ..+.++++++|+
T Consensus 37 ~dG~~~iD~~~~~~~~~lGh-~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~--------~~~~~~~~~sGs 107 (403)
T PRK05093 37 QQGKEYIDFAGGIAVTALGH-CHPALVKALKEQGEKLWHISNVFTNEPALRLAKKLIDAT--------FAERVFFANSGA 107 (403)
T ss_pred CCCCEEEEcCcCHHhccCCC-CCHHHHHHHHHHHHhcCcccCccCCHHHHHHHHHHHhhC--------CCCEEEEeCchH
Confidence 34778999977732222233 689999999998875221 11111111234455555442 246999999999
Q ss_pred HHHHHHHHHhcC-------C-CCEEEEcCCCCcchHHHHHhCCC-------------eEEEeeccCCCCCCCChhHHHhh
Q 014936 111 QAIDVAMALLSR-------P-GANILLPRPGFPIYELSAAFRHI-------------EVRHFDLLPDKGWEVDLDDIESL 169 (415)
Q Consensus 111 ~al~~~~~~l~~-------~-gd~vi~~~p~y~~~~~~~~~~g~-------------~~~~~~~~~~~~~~~~~~~l~~~ 169 (415)
+|+..+++.... . .+.|+..+.+|++....+...+. ++..++. .|++.+++.
T Consensus 108 eA~e~a~klar~~~~~~~~~~~~~ii~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~~ 180 (403)
T PRK05093 108 EANEAAFKLARRYACDRHGPEKTEIIAFHNSFHGRTLFTVSVGGQPKYSDGFGPKPADITHVPF-------NDLAAVKAV 180 (403)
T ss_pred HHHHHHHHHHHHHHhhcCCCCCCeEEEEcCCcCCchhhhHhhcCChhhhhcCCCCCCCcEEeCC-------CCHHHHHHH
Confidence 999999987521 1 25788888888875543322111 1111111 278999998
Q ss_pred cCCCceEEEecCCCCccccCC--CHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCcccc
Q 014936 170 ADQNTVALVIINPGNPCGNVY--SYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRW 247 (415)
Q Consensus 170 ~~~~~~~v~i~~p~nptG~~~--~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~ 247 (415)
+.+++++|++. |.||+|-++ +.+.+++|+++|++||+++|+||+|.++.+.|... +....+.... +.||||.+
T Consensus 181 l~~~~aaiiie-p~~~~gg~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~~~-~~~~~~~~pd---i~s~sK~l 255 (403)
T PRK05093 181 IDDHTCAVVVE-PIQGEGGVIPATPEFLQGLRELCDQHNALLIFDEVQTGMGRTGDLF-AYMHYGVTPD---ILTSAKAL 255 (403)
T ss_pred hcCCeEEEEEe-cccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCccch-hhhhcCCCCC---EEEecccc
Confidence 87666655555 888887664 88999999999999999999999999877766532 2222222212 45899997
Q ss_pred CCCCceEEEEEeeCCCCCCChHHHHHHHHhh-ccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcC
Q 014936 248 IVPGWRLGWFVTTDPCGMFRKPKVVERMKKY-FDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEI 326 (415)
Q Consensus 248 ~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 326 (415)
+ +|+|+||+++++ ++++.+... ...+.+.+++.|.++.+.|+... -.+..++++++++++.+.|+++
T Consensus 256 ~-~G~rig~vv~~~--------~i~~~l~~~~~~~t~~~~~~~~~aa~a~L~~~~---~~~~~~~~~~~~~~l~~~L~~~ 323 (403)
T PRK05093 256 G-GGFPIGAMLTTA--------EIASHFKVGTHGSTYGGNPLACAVAEAVFDIIN---TPEVLEGVKARRQRFVDGLQKI 323 (403)
T ss_pred c-CCcceEEEEEcH--------HHHhhcCCCCCCCCCCCCHHHHHHHHHHHHHHh---hccHHHHHHHHHHHHHHHHHHH
Confidence 6 899999999976 677777653 33355678899998888775421 2345678888888888888875
Q ss_pred C-CCcC-CCCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEe--eCChhhHHHHHHHHH
Q 014936 327 P-CISC-PHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTF--AVDPYSLEECLDRIK 402 (415)
Q Consensus 327 ~-~~~~-~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~--~~~~~~l~~~l~~l~ 402 (415)
. .... ...+..|.++|+.++... .....+++..++ ++||.+.|+. .+++|+++ ..+++++++++++|.
T Consensus 324 ~~~~~~~~~~~~~G~~~~~~l~~~~---~~~~~~~~~~l~-~~Gv~v~~~g----~~~lRl~~~~~~~~~~i~~~~~~l~ 395 (403)
T PRK05093 324 NQKYGVFSEIRGMGLLIGAELKPQY---KGRARDFLNAAA-EEGVMVLVAG----PDVLRFAPSLVIEEADIDEGLARFE 395 (403)
T ss_pred HhhCCCeEeEeeCceEEEEEecCcc---hhHHHHHHHHHH-HCCeEEecCC----CCEEEEeCCCCCCHHHHHHHHHHHH
Confidence 1 1111 124567889998885310 013456777665 4699998753 47899976 458999999999999
Q ss_pred HHHHHH
Q 014936 403 SFYQRH 408 (415)
Q Consensus 403 ~~~~~~ 408 (415)
+++.++
T Consensus 396 ~~l~~~ 401 (403)
T PRK05093 396 KAVAKV 401 (403)
T ss_pred HHHHHh
Confidence 988653
No 159
>PRK04073 rocD ornithine--oxo-acid transaminase; Provisional
Probab=99.96 E-value=6.6e-27 Score=221.53 Aligned_cols=327 Identities=16% Similarity=0.136 Sum_probs=223.9
Q ss_pred cCcceeEecccCCCCCCCCC-CcHHHHHHHHHHHhcCCCC-CCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChH
Q 014936 33 NEKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLSEKFN-GYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCT 110 (415)
Q Consensus 33 ~~~~~i~l~~g~~~~~~~~~-~~~~~~~a~~~~~~~~~~~-~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~ 110 (415)
+|+.++||..|.-... ++ .+|.+.+++.++++..... .+.......+|.++++++. ..+.++++++|+
T Consensus 38 ~G~~~lD~~~g~~~~~--lGh~~p~v~~ai~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~--------~~~~~~~~~SGs 107 (396)
T PRK04073 38 EGNRYMDMLSAYSAVN--QGHRHPKIIQALKDQADKVTLTSRAFHSDQLGPWYEKVAKLT--------GKDMVLPMNTGA 107 (396)
T ss_pred CCCEEEEcCCCHHhcc--CCCCCHHHHHHHHHHHhhccccccccCCHHHHHHHHHHHhcC--------CCCeEEEcCChH
Confidence 4788999977753211 22 5799999999988753221 1111122345555555543 246999999999
Q ss_pred HHHHHHHHHhcC---------CC-CEEEEcCCCCcchHHHHHh-CCCe------------EEEeeccCCCCCCCChhHHH
Q 014936 111 QAIDVAMALLSR---------PG-ANILLPRPGFPIYELSAAF-RHIE------------VRHFDLLPDKGWEVDLDDIE 167 (415)
Q Consensus 111 ~al~~~~~~l~~---------~g-d~vi~~~p~y~~~~~~~~~-~g~~------------~~~~~~~~~~~~~~~~~~l~ 167 (415)
+|+..+++.... +| ++|+...-+|++....+.. .+.. +..++. .|++.++
T Consensus 108 eA~e~Alk~a~~~~~~~~g~~~~r~~ii~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~ 180 (396)
T PRK04073 108 EAVETAIKAARRWAYDVKGVEPNKAEIIACEGNFHGRTMAAVSLSSEEEYKRGFGPMLPGIKKIPY-------GDLEALK 180 (396)
T ss_pred HHHHHHHHHHHHHhhhccCCCCCCCEEEEECCCcCCCCHHHHhhcCCcccccCCCCCCCCceEeCC-------CCHHHHH
Confidence 999999998631 34 6788888888875544322 2211 111111 2789999
Q ss_pred hhcCCCceEEEecCCCCccccCCCH-HHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccc
Q 014936 168 SLADQNTVALVIINPGNPCGNVYSY-QHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKR 246 (415)
Q Consensus 168 ~~~~~~~~~v~i~~p~nptG~~~~~-~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~ 246 (415)
+.++++++++++..++||+|.+++. +.+++|.++|+++|+++|+||+|.++...+.... ....+...+ +.++||.
T Consensus 181 ~~i~~~~~~viiep~~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~g~g~~g~~~~-~~~~~~~pd---i~~~sK~ 256 (396)
T PRK04073 181 AAITPNTAAFLVEPIQGEAGINIPPEGFLKAARELCKEENVLFIADEIQTGLGRTGKLFA-CDWDNVTPD---MYILGKA 256 (396)
T ss_pred HhcccCeEEEEEcCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhCCCcCcHHHH-hhhcCCCCC---EEEeccc
Confidence 9888788877887889999999765 4699999999999999999999998765543221 111222222 3357999
Q ss_pred cCCCCceEEEEEeeCCCCCCChHHHHHHHHhh-ccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhc
Q 014936 247 WIVPGWRLGWFVTTDPCGMFRKPKVVERMKKY-FDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKE 325 (415)
Q Consensus 247 ~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 325 (415)
++++|+|+||+++++ ++.+.+... ...+++.+++.+.++.+.|+...+ +...++.+++++++.+.|++
T Consensus 257 lg~gg~~ig~~~~~~--------~i~~~~~~~~~~~t~~~~~~~~aaa~aaL~~~~~---~~l~~~~~~~~~~l~~~L~~ 325 (396)
T PRK04073 257 LGGGVFPISCVAANR--------DILGVFTPGSHGSTFGGNPLACAVSIAALEVLEE---EKLPERSLELGEYFKEQLKE 325 (396)
T ss_pred ccCCCCcceEEEEcH--------HHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHh---cCHHHHHHHHHHHHHHHHHh
Confidence 999999999999865 677777543 233566788999999888864211 23446667778888888887
Q ss_pred C--CCCcCCCCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEe--eCChhhHHHHHHHH
Q 014936 326 I--PCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTF--AVDPYSLEECLDRI 401 (415)
Q Consensus 326 ~--~~~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~--~~~~~~l~~~l~~l 401 (415)
+ +.+. . .+..|++++++++. +..++...+ .++||.+.+.. .++|||++ ..+++++++++++|
T Consensus 326 l~~~~i~-~-~~~~g~~~~~~~~~-------~~~~~~~~l-~~~Gv~~~~~~----~~~iRi~p~l~~t~e~i~~~~~~l 391 (396)
T PRK04073 326 IDNPMIK-E-VRGRGLFIGVELNE-------PARPYCEAL-KEEGLLCKETH----ETVIRFAPPLVITKEELDWAFEKI 391 (396)
T ss_pred hcCCccc-c-eecceEEEEEEecc-------hHHHHHHHH-HHCCeEEecCC----CCEEEEECCcccCHHHHHHHHHHH
Confidence 5 2233 2 24457788887752 355666665 56799997632 47899996 57999999999999
Q ss_pred HHHH
Q 014936 402 KSFY 405 (415)
Q Consensus 402 ~~~~ 405 (415)
++++
T Consensus 392 ~~~l 395 (396)
T PRK04073 392 KAVL 395 (396)
T ss_pred HHHh
Confidence 8764
No 160
>cd00610 OAT_like Acetyl ornithine aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to ornithine aminotransferase, acetylornithine aminotransferase, alanine-glyoxylate aminotransferase, dialkylglycine decarboxylase, 4-aminobutyrate aminotransferase, beta-alanine-pyruvate aminotransferase, adenosylmethionine-8-amino-7-oxononanoate aminotransferase, and glutamate-1-semialdehyde 2,1-aminomutase. All the enzymes belonging to this family act on basic amino acids and their derivatives are involved in transamination or decarboxylation.
Probab=99.96 E-value=3.1e-27 Score=226.07 Aligned_cols=345 Identities=18% Similarity=0.163 Sum_probs=228.0
Q ss_pred cCcceeEecccCCCCCCCCC-CcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHH
Q 014936 33 NEKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQ 111 (415)
Q Consensus 33 ~~~~~i~l~~g~~~~~~~~~-~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~ 111 (415)
+|+.++||..|..... ++ .+|.+.+++.+.+... ..|+...+..++...+++.+.+..+ ...+++++++|+++
T Consensus 34 dG~~~id~~~~~~~~~--lG~~~p~v~~a~~~~~~~~--~~~~~~~~~~~~~~~l~~~l~~~~~--~~~~~v~~~~sgse 107 (413)
T cd00610 34 DGNRYLDFLSGIGVLN--LGHNHPEVVEALKEQLAKL--THFSLGFFYNEPAVELAELLLALTP--EGLDKVFFVNSGTE 107 (413)
T ss_pred CCCEEEEcCccHHhhc--cCCCCHHHHHHHHHHHHhC--cCccCcccCCHHHHHHHHHHHHhCC--CCCCEEEEcCcHHH
Confidence 5889999998753222 33 6899999999988643 2444332334555555555554443 36789999999999
Q ss_pred HHHHHHHHhc--CCCCEEEEcCCCCcchHHHHHhCC-------------CeEEEeeccCC----CCCCCChhHHHhhcCC
Q 014936 112 AIDVAMALLS--RPGANILLPRPGFPIYELSAAFRH-------------IEVRHFDLLPD----KGWEVDLDDIESLADQ 172 (415)
Q Consensus 112 al~~~~~~l~--~~gd~vi~~~p~y~~~~~~~~~~g-------------~~~~~~~~~~~----~~~~~~~~~l~~~~~~ 172 (415)
++..+++.+. .+++.|++.+++|++........+ .++..++.+.. ..+..|++.|++.+++
T Consensus 108 a~~~al~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~ 187 (413)
T cd00610 108 AVEAALKLARAYTGRKKIISFEGAYHGRTLGALSLTGSKKYRGGFGPLLPGVLHVPYPYRYRPPAELADDLEALEEALEE 187 (413)
T ss_pred HHHHHHHHHHHHcCCCeEEEECCCcCCccHHHHHhcCCccccccCCCCCCCcEEeCCCccccchhhHHHHHHHHHHHHhc
Confidence 9999999874 568999999999998665443322 23445554311 1233488899988876
Q ss_pred --CceEEEecCC-CCccccCC-CHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccC
Q 014936 173 --NTVALVIINP-GNPCGNVY-SYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWI 248 (415)
Q Consensus 173 --~~~~v~i~~p-~nptG~~~-~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~ 248 (415)
....+++++| ++++|..+ +.+.+++|.++|+++|+++|+||+|.++...+... .....+... .+.|+||.++
T Consensus 188 ~~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~Dev~~g~g~~g~~~-~~~~~~~~~---d~~t~sK~l~ 263 (413)
T cd00610 188 HPEEVAAVIVEPIQGEGGVIVPPPGYLKALRELCRKHGILLIADEVQTGFGRTGKMF-AFEHFGVEP---DIVTLGKGLG 263 (413)
T ss_pred CCCCEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCcchh-hHhhcCCCC---CeEEEccccc
Confidence 3445566666 56779876 67779999999999999999999999764443321 111122221 2348899976
Q ss_pred CCCceEEEEEeeCCCCCCChHHHHHHH--Hhhc-cccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhc
Q 014936 249 VPGWRLGWFVTTDPCGMFRKPKVVERM--KKYF-DILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKE 325 (415)
Q Consensus 249 ~~G~r~G~~~~~~~~~~~~~~~~~~~~--~~~~-~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 325 (415)
. |+|+||+++++ ++++.+ .... ..+.+.+++.+.++.+.|+...+ ++..++++++.+++.+.|+.
T Consensus 264 ~-g~~~g~~~~~~--------~~~~~~~~~~~~~~~t~~~~~~~~~a~~a~l~~l~~---~~~~~~~~~~~~~l~~~l~~ 331 (413)
T cd00610 264 G-GLPLGAVLGRE--------EIMDAFPAGPGLHGGTFGGNPLACAAALAVLEVLEE---EGLLENAAELGEYLRERLRE 331 (413)
T ss_pred C-ccccEEEEEcH--------HHHHhhccCCCCCCCCCCcCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHH
Confidence 5 79999999864 577765 2222 23456788888888777754211 34567777777777777775
Q ss_pred CCC-CcC-CCCCCCceEEEEecCcccc---CCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEee--CChhhHHHHH
Q 014936 326 IPC-ISC-PHKPEGSMAVMLKLNLSLL---DDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFA--VDPYSLEECL 398 (415)
Q Consensus 326 ~~~-~~~-~~~p~~g~~~~~~l~~~~~---~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~--~~~~~l~~~l 398 (415)
+.. ... ...+..|.++++.++.... .+......+...+ .++||.+.|+. .+.+|++++ .+++++++++
T Consensus 332 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~gv~v~~~~----~~~lR~~~~~~~t~~~i~~~~ 406 (413)
T cd00610 332 LAEKHPLVGDVRGRGLMIGIELVKDRATKPPDKELAAKIIKAA-LERGLLLRPSG----GNVIRLLPPLIITEEEIDEGL 406 (413)
T ss_pred HHhhCCcEEEeecCceEEEEEEecCCCcCCcchHHHHHHHHHH-HHCCeEEeecC----CCEEEEECCCcCCHHHHHHHH
Confidence 411 111 1123457788887754210 0001234555554 56799999975 478999884 5889999999
Q ss_pred HHHHHH
Q 014936 399 DRIKSF 404 (415)
Q Consensus 399 ~~l~~~ 404 (415)
++|.++
T Consensus 407 ~~l~~~ 412 (413)
T cd00610 407 DALDEA 412 (413)
T ss_pred HHHHHh
Confidence 999875
No 161
>cd00613 GDC-P Glycine cleavage system P-protein, alpha- and beta-subunits. This family consists of Glycine cleavage system P-proteins EC:1.4.4.2 from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex EC:2.1.2.10 (GDC) also annotated as glycine cleavage system or glycine synthase. GDC consists of four proteins P, H, L and T. The reaction catalysed by this protein is: Glycine + lipoylprotein <= S-aminomethyldihydrolipoylprotein + CO2. Alpha-beta-type dimers associate to form an alpha(2)beta(2) tetramer, where the alpha- and beta-subunits are structurally similar and appear to have arisen by gene duplication and subsequent divergence with a loss of one active site. The members of this CD are widely dispersed among all three forms of cellular life.
Probab=99.96 E-value=9.1e-27 Score=221.68 Aligned_cols=330 Identities=17% Similarity=0.192 Sum_probs=223.3
Q ss_pred CcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCC-----CCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCC
Q 014936 34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAP-----TAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSG 108 (415)
Q Consensus 34 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~-----~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g 108 (415)
+.++++++.|+|+ +++++.+.++..+. . ....|.+ ..|.+++++++++++.+.+|. +.++++++++
T Consensus 19 ~~~~~~l~~g~~~----~~~p~~~~~~~~~~-~--~~~~~~~~~~~~~~g~~~~~~~~~~~la~~~g~--~~~~v~~~~~ 89 (398)
T cd00613 19 DQSMSFLGSGTYK----HNPPAVIKRNILEN-E--FYTAYTPYQPEISQGRLQALFELQTMLCELTGM--DVANASLQDE 89 (398)
T ss_pred ccCcccccccccC----CcCcHHHHHHhccc-c--CcccCCCCChhhhhhHHHHHHHHHHHHHHHHCC--CccceeccCc
Confidence 5567999999975 55667666656555 2 2234554 678999999999999988774 4446766665
Q ss_pred hH-HHHHHHHHHhcCC--CCEEEEcCCCCcchHHHHHhCC----CeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecC
Q 014936 109 CT-QAIDVAMALLSRP--GANILLPRPGFPIYELSAAFRH----IEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIIN 181 (415)
Q Consensus 109 ~~-~al~~~~~~l~~~--gd~vi~~~p~y~~~~~~~~~~g----~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~ 181 (415)
++ ++...+..++..+ ||+|++++|.|+.+...+...| .+++.+++++ ++.+|++++++.+.+++++|++++
T Consensus 90 g~~~~~~~~~~~~~~~~~gd~Vl~~~~~h~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~~t~~viv~~ 167 (398)
T cd00613 90 ATAAAEAAGLAAIRAYHKRNKVLVPDSAHPTNPAVARTRGEPLGIEVVEVPSDE--GGTVDLEALKEEVSEEVAALMVQY 167 (398)
T ss_pred hHHHHHHHHHHHHhcccCCCEEEEcCccCcchHHHHHHhcccCCcEEEEeccCC--CCCcCHHHHHHhcCCCeEEEEEEC
Confidence 55 4555555555565 9999999999999888877776 8888888743 346899999999988899999999
Q ss_pred CCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCC----CceEEEE
Q 014936 182 PGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVP----GWRLGWF 257 (415)
Q Consensus 182 p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~----G~r~G~~ 257 (415)
|+ |+|.+. +.+++|+++|+++|+++|+|+++..+... .....++ ..++++|+||++ +| |+++||+
T Consensus 168 ~~-~~G~~~--~~l~~i~~la~~~g~~livD~~~~~~~~~----~~~~~~~---~d~~~~s~~K~~-~p~g~Ggp~~g~l 236 (398)
T cd00613 168 PN-TLGVFE--DLIKEIADIAHSAGALVYVDGDNLNLTGL----KPPGEYG---ADIVVGNLQKTG-VPHGGGGPGAGFF 236 (398)
T ss_pred CC-CCceec--chHHHHHHHHHhcCCEEEEEeccccccCC----CChHHcC---CCEEEeeccccC-CCCCCCCCceeEE
Confidence 85 899983 45799999999999999999988653311 1111222 238889999997 55 7899999
Q ss_pred EeeCCCCCCChHHHHHHHHh------------------------------hccccCCchhHHHHHHHHhhCCCcHHHHHH
Q 014936 258 VTTDPCGMFRKPKVVERMKK------------------------------YFDILGDPATFIQAAVPSILQQPDEVFFKK 307 (415)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~------------------------------~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~ 307 (415)
+.++ ++.+.+.. ......+.++....++...+....+..+++
T Consensus 237 ~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~e~~~~~~~~~~~~~~~~a~~~l~~~~~~g~~~ 308 (398)
T cd00613 237 AVKK--------ELVRFLPGRLVGVTKDAEGNRAFRLALQTREQHIRREKATSNICTGQALLALMAAMYIVYLGPEGLKE 308 (398)
T ss_pred EEhh--------hhHhhCCCCeeccccccCCCcceEEecccchhhcccccccccceecHHHHHHHHHHHHHHhCHHHHHH
Confidence 9864 23333210 000012222333333333333334467888
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceE--EEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEE
Q 014936 308 TLNLLKQSVDICYNKIKEIPCISCPHKPEGSMA--VMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRV 385 (415)
Q Consensus 308 ~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~--~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi 385 (415)
..++++++++++.+.|+++++.. .+.+..+ ++++++... + .+..++...| .++||.+.... ....+.+|+
T Consensus 309 ~~~~~~~~~~~l~~~L~~~~~~~---~~~~~~~~~v~~~~~~~~--~-~~~~~~~~~L-~~~gi~~~~~~-~~~~~~lRi 380 (398)
T cd00613 309 IAERAHLNANYLAKRLKEVGGVL---PFNGPFFHEFVLRLPPLY--G-IRAEDLAKAL-IDGGFHAPTMY-LPVDGTLMI 380 (398)
T ss_pred HHHHHHHHHHHHHHHHHhcCCcc---cCCCCeeEEEEEEcCCcc--h-HHHHHHHHhh-hhcCccccccc-cCCCCeEEE
Confidence 89999999999999999885443 2323322 455554210 0 1345666666 46698864421 122578999
Q ss_pred Eee--CChhhHHHHHHHH
Q 014936 386 TFA--VDPYSLEECLDRI 401 (415)
Q Consensus 386 ~~~--~~~~~l~~~l~~l 401 (415)
++. ++++|++.+++.|
T Consensus 381 s~~~~~t~edid~~~~~L 398 (398)
T cd00613 381 EPTETETKEELDALLEAL 398 (398)
T ss_pred EcCCCCCHHHHHHHHHhC
Confidence 994 6899999998764
No 162
>PRK06234 methionine gamma-lyase; Provisional
Probab=99.96 E-value=2e-26 Score=217.08 Aligned_cols=289 Identities=13% Similarity=0.155 Sum_probs=203.6
Q ss_pred CCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHH----HHhCCCe
Q 014936 72 GYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELS----AAFRHIE 147 (415)
Q Consensus 72 ~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~----~~~~g~~ 147 (415)
+|++ .+..+|++.+|++++ .++.++++||++++..++.+++++||+|+++.|.|..+... ++..|++
T Consensus 60 r~~~-p~~~~Le~~iA~~~g--------~~~~l~~~sG~~Ai~~al~~ll~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~~ 130 (400)
T PRK06234 60 RLGN-PTSTEVENKLALLEG--------GEAAVVAASGMGAISSSLWSALKAGDHVVASDTLYGCTFALLNHGLTRYGVE 130 (400)
T ss_pred CCCC-ccHHHHHHHHHHHhC--------CCcEEEEcCHHHHHHHHHHHHhCCCCEEEEecCccchHHHHHHHHHhhCCeE
Confidence 3444 578999999999983 35788999999999999999999999999999999875543 4668999
Q ss_pred EEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhc--CcEEEEccccCCcccCCCCc
Q 014936 148 VRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKL--KTLVIADEVYGHLVFGDKPF 225 (415)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~--~~~li~De~~~~~~~~~~~~ 225 (415)
+..++. .|++++++++++++++|++++|+||||.+.+ +++|+++|+++ |+++|+|++|+.+.+.
T Consensus 131 v~~vd~-------~d~e~l~~~i~~~tklI~iesP~NPtG~v~d---l~~I~~la~~~~~~i~livDea~~~~~~~---- 196 (400)
T PRK06234 131 VTFVDT-------SNLEEVRNALKANTKVVYLETPANPTLKVTD---IKAISNIAHENNKECLVFVDNTFCTPYIQ---- 196 (400)
T ss_pred EEEECC-------CCHHHHHHHhccCCeEEEEECCCCCCCCcCC---HHHHHHHHHhcCCCCEEEEECCCCchhcC----
Confidence 888864 2789999999889999999999999999965 77777778786 9999999999875532
Q ss_pred ccccccCCCCCeEEEccCccccCCCCceE-EEEEeeCCCCCCChHHHHHHHHhh--c-cccCCchhHHHHHHHHhhCCCc
Q 014936 226 VPMGVFGSTVPILTLGSLSKRWIVPGWRL-GWFVTTDPCGMFRKPKVVERMKKY--F-DILGDPATFIQAAVPSILQQPD 301 (415)
Q Consensus 226 ~~~~~~~~~~~~i~~~s~sK~~~~~G~r~-G~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~~a~~~~l~~~~ 301 (415)
.++ ..+ ..+++.|+||.++++|.++ ||+++++ ++++.++.. . ..+...++.....+...|+.
T Consensus 197 ~~l-~~g---~Divv~S~sK~l~g~g~~~gG~v~~~~--------~~~~~l~~~~~~~~~g~~l~p~~a~l~~~~l~t-- 262 (400)
T PRK06234 197 RPL-QLG---ADVVVHSATKYLNGHGDVIAGFVVGKE--------EFINQVKLFGIKDMTGSVIGPFEAFLIIRGMKT-- 262 (400)
T ss_pred Cch-hhC---CcEEEeeccccccCCCCceeEEEEecH--------HHHHHHHHHHHHHhcCCCCCHHHHHHHHhccCc--
Confidence 122 122 2388999999999889875 8888764 566666542 1 22345566666666666654
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCC----------------CceEEEEecCccccCCCCCHHHHHHHHHh
Q 014936 302 EVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPE----------------GSMAVMLKLNLSLLDDIIDDIDFCFKLAK 365 (415)
Q Consensus 302 ~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~----------------~g~~~~~~l~~~~~~~~~~~~~~~~~ll~ 365 (415)
+..+.++.+++...+.+.|+..|.+..+.+|. .|..+.++++.. .....+|+..+ +
T Consensus 263 ---l~~r~~~~~~na~~~a~~L~~~~~V~~V~~p~l~~~~~~~~~~~~~~~~g~l~s~~l~~~----~~~~~~f~~~l-~ 334 (400)
T PRK06234 263 ---LQIRMEKHCKNAMKVAKFLESHPAVEKVYYPGLESFEYYELAKKQMSLPGAMISFELKGG----VEEGKVVMNNV-K 334 (400)
T ss_pred ---HHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCCcHHHHHHhCCCCCceEEEEecCc----HHHHHHHHHhC-C
Confidence 55667777788888888888776554333442 234555666421 11223444443 4
Q ss_pred hcCeEEEcCCCCCC-----------------------CCeEEEEeeCChhhHHHHHHHHHHHHHH
Q 014936 366 EESVIILPGTAVGL-----------------------KNWLRVTFAVDPYSLEECLDRIKSFYQR 407 (415)
Q Consensus 366 ~~gi~v~~g~~~~~-----------------------~~~iRi~~~~~~~~l~~~l~~l~~~~~~ 407 (415)
-.++..+-|..... ++.||+|++.. +.+.+++.|+++++.
T Consensus 335 ~~~~~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~l~R~svGlE--~~~dl~~dl~~al~~ 397 (400)
T PRK06234 335 LATLAVSLGDAETLIQHPASMTHSPYTAEERKEAGISDGLVRLSVGLE--DVDDIIADLKQALDL 397 (400)
T ss_pred cceEeccCCCCCceecCCccCCCCCCCHHHHHhcCCCCCeEEEEeCCC--CHHHHHHHHHHHHHH
Confidence 44555544533210 35799999874 455666666666654
No 163
>PLN03227 serine palmitoyltransferase-like protein; Provisional
Probab=99.96 E-value=3e-26 Score=215.61 Aligned_cols=338 Identities=14% Similarity=0.113 Sum_probs=221.5
Q ss_pred eEecccCCCCCCCCCCcHHHHHHHHHHHhc-------CCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChH
Q 014936 38 ISLAMGDPTVHSCFHTTHVATEAVAEALLS-------EKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCT 110 (415)
Q Consensus 38 i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~-------~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~ 110 (415)
+||++++ +.++..+|+++++..++++. ... .|+...++.+|++.+|++++ ..+.+++++|.+
T Consensus 1 ~~f~s~d---yLgl~~~~~~~~~~~~a~~~~g~~~~~sr~-~yg~~~~~~~LE~~lA~~~g-------~e~al~~~sG~~ 69 (392)
T PLN03227 1 LNFATHD---FLSTSSSPTLRQTALESLSHYGCGSCGPRG-FYGTIDAHLELEQCMAEFLG-------TESAILYSDGAS 69 (392)
T ss_pred CCCcCcC---ccCCCCCHHHHHHHHHHHHHhCCCCccccc-ccCChHHHHHHHHHHHHHhC-------CCcEEEecCcHH
Confidence 4677776 56678899999999998875 232 47766788999999999983 235566666655
Q ss_pred HHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcC-----------CCceEEEe
Q 014936 111 QAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLAD-----------QNTVALVI 179 (415)
Q Consensus 111 ~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~-----------~~~~~v~i 179 (415)
+.. .++.++.++||.|+++++.|.++...+...+.++..+++... -+++.+.+.+. ++++.|++
T Consensus 70 a~~-~~i~~l~~~GD~Vl~~~~~h~s~~~~~~l~~~~~~~~~~~d~----~~l~~~~~~i~~~~~a~~~~~~~~t~~vi~ 144 (392)
T PLN03227 70 TTS-STVAAFAKRGDLLVVDRGVNEALLVGVSLSRANVRWFRHNDM----KDLRRVLEQVRAQDVALKRKPTDQRRFLVV 144 (392)
T ss_pred HHH-HHHHHhCCCCCEEEEeccccHHHHHHHHHcCCeEEEeCCCCH----HHHHHHHHHhhhhccccccccCCCcEEEEE
Confidence 555 777788999999999999999998888777888877765311 13344333332 35777888
Q ss_pred cCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccc--cCC-CCCeEEEccCccccCCCCceEEE
Q 014936 180 INPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGV--FGS-TVPILTLGSLSKRWIVPGWRLGW 256 (415)
Q Consensus 180 ~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~--~~~-~~~~i~~~s~sK~~~~~G~r~G~ 256 (415)
..++||+|.+.+ +++++++|++||+++|+||+|+....+..+...... +.+ .+..+++.|+||.++.. .|+
T Consensus 145 E~v~~~~G~i~~---l~~i~~l~~~~g~~livDe~~~~g~~g~~G~g~~~~~g~~p~~~~Div~~slsk~~g~~---gg~ 218 (392)
T PLN03227 145 EGLYKNTGTLAP---LKELVALKEEFHYRLILDESFSFGTLGKSGRGSLEHAGLKPMVHAEIVTFSLENAFGSV---GGM 218 (392)
T ss_pred cCCcCCCCcccC---HHHHHHHHHHcCCEEEEECcccccccCCCCCcHHHHcCCCCCCCceEEEeechhhhhcc---CcE
Confidence 888999999977 778889999999999999999844333221111221 111 22358888999987544 488
Q ss_pred EEeeCCCCCCChHHHHHHHHhhc-c--ccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCC
Q 014936 257 FVTTDPCGMFRKPKVVERMKKYF-D--ILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPH 333 (415)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~ 333 (415)
+++++ ++++.++... . ++...++..+.++...+.... ..+++.++++++.+++.+.|++. ++..+.
T Consensus 219 v~~~~--------~~~~~~~~~~~~~~~~~~~~p~~~~aa~~al~~~~--~~~~~~~~l~~~~~~l~~~L~~~-~~~~~~ 287 (392)
T PLN03227 219 TVGSE--------EVVDHQRLSGSGYCFSASAPPFLAKADATATAGEL--AGPQLLNRLHDSIANLYSTLTNS-SHPYAL 287 (392)
T ss_pred EecCH--------HHHHHHHHhCcCccccCCCCHHHHHHHHHHHHHHh--cCHHHHHHHHHHHHHHHHHHHhc-CCcccc
Confidence 87754 5666554331 1 222334656666655553311 13466778888888999988752 221110
Q ss_pred ---------CCCCceEEEEecCccccCC-CC---CHHHHHHHHHhhcCeEEEcCC-------CCCCCCeEEEEe--eCCh
Q 014936 334 ---------KPEGSMAVMLKLNLSLLDD-II---DDIDFCFKLAKEESVIILPGT-------AVGLKNWLRVTF--AVDP 391 (415)
Q Consensus 334 ---------~p~~g~~~~~~l~~~~~~~-~~---~~~~~~~~ll~~~gi~v~~g~-------~~~~~~~iRi~~--~~~~ 391 (415)
....++++.+.+....... .. ...++...+ .++|+.+.+.. .+..+..+|+++ .+++
T Consensus 288 ~~rg~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~-~~~Gi~~~~~~~~~~~~~~~~P~~~iR~~~~~~~t~ 366 (392)
T PLN03227 288 KLRNRLVITSDPISPIIYLRLSDQEATRRTDETLILDQIAHHS-LSEGVAVVSTGGHVKKFLQLVPPPCLRVVANASHTR 366 (392)
T ss_pred ccccccccCCCCCCCEEEEEeCCHHHhhhhhhhhHHHHHHHHH-HHCCCEEEecccccCCcCCCCCCceEEEEecCCCCH
Confidence 1223556666664311000 00 012455554 56799986522 122357899999 4799
Q ss_pred hhHHHHHHHHHHHHHHHH
Q 014936 392 YSLEECLDRIKSFYQRHA 409 (415)
Q Consensus 392 ~~l~~~l~~l~~~~~~~~ 409 (415)
|+++++++.|++++++..
T Consensus 367 eei~~~~~~l~~~~~~~~ 384 (392)
T PLN03227 367 EDIDKLLTVLGEAVEAIL 384 (392)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 999999999999998764
No 164
>TIGR02006 IscS cysteine desulfurase IscS. This model represents IscS, one of several cysteine desulfurases from a larger protein family designated (misleadingly, in this case) class V aminotransferases. IscS is one of at least 6 enzymes characteristic of the IscSUA-hscAB-fsx system of iron-sulfur cluster assembly. Scoring almost as well as proteobacterial sequences included in the model are mitochondrial cysteine desulfurases, apparently from an analogous system in eukaryotes. The sulfur, taken from cysteine, may be used in other systems as well, such as tRNA base modification and biosynthesis of other cofactors.
Probab=99.96 E-value=6.5e-26 Score=215.31 Aligned_cols=337 Identities=14% Similarity=0.109 Sum_probs=227.7
Q ss_pred eEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCC--C------CCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCCh
Q 014936 38 ISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGY--A------PTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGC 109 (415)
Q Consensus 38 i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y--~------~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~ 109 (415)
+.|+.+.+ .+.++.+++++.+.+........ . ......++|+.+++++ ++++++|++++|+
T Consensus 5 ~yld~aa~-----~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~------g~~~~~v~~~~g~ 73 (402)
T TIGR02006 5 IYLDYAAT-----TPVDPRVAEKMMPYLTEKFGNPASRSHSFGWEAEEAVENARNQVAELI------GADSREIVFTSGA 73 (402)
T ss_pred EEeeCCcC-----CCCCHHHHHHHHHHHHhcCCCCChhhhHHHHHHHHHHHHHHHHHHHHh------CCCCCeEEEeCCH
Confidence 56666653 35678899999887753211111 0 0123556788888887 4678899999999
Q ss_pred HHHHHHHHHHhc----CCCCEEEEcCCCCcchHHH---HHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCC
Q 014936 110 TQAIDVAMALLS----RPGANILLPRPGFPIYELS---AAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINP 182 (415)
Q Consensus 110 ~~al~~~~~~l~----~~gd~vi~~~p~y~~~~~~---~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p 182 (415)
+++++.++.++. ++||+|+++.++|+++... ++..|+++..++.++ ++.+|++.+++.+++++++++++++
T Consensus 74 t~a~~~~l~~l~~~~~~~g~~Vi~~~~~h~s~~~~~~~~~~~g~~v~~v~~~~--~~~~d~~~l~~~l~~~~~lv~v~~~ 151 (402)
T TIGR02006 74 TESNNLAIKGIAHFYKSKGNHIITSKTEHKAVLDTCRYLEREGFEVTYLPPKS--NGLIDLEELKAAIRDDTILVSIMHV 151 (402)
T ss_pred HHHHHHHHHHHHHhhcCCCCEEEECCCccHHHHHHHHHHHhcCCEEEEEccCC--CCcCCHHHHHHhcCCCCEEEEEECC
Confidence 999999887763 6899999999999876544 345699999988753 3568999999999888999999999
Q ss_pred CCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCC
Q 014936 183 GNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDP 262 (415)
Q Consensus 183 ~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~ 262 (415)
+||||.+.+ +++|.++|+++|+++++|++++... .+..+...+.+ +++.|.+|.++.+| +|++++++.
T Consensus 152 ~n~tG~~~~---~~~I~~l~~~~g~~livD~a~a~g~----~~~~~~~~~~D---~~~~s~~K~~gp~G--~G~l~~~~~ 219 (402)
T TIGR02006 152 NNEIGVIQD---IAAIGEICRERKVFFHVDAAQSVGK----IPINVNELKVD---LMSISGHKIYGPKG--IGALYVRRK 219 (402)
T ss_pred CcCceeccc---HHHHHHHHHHcCCEEEEEcchhcCC----cccCccccCCC---EEEEehhhhcCCCc--eEEEEEccC
Confidence 999999964 7788888999999999999998633 22223333333 77788899876556 899888753
Q ss_pred CCCCChHHHHHHHHhhccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCC--CceE
Q 014936 263 CGMFRKPKVVERMKKYFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPE--GSMA 340 (415)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~--~g~~ 340 (415)
......+.+...-.......++++.....++..+++.. ...++...++.+++++.+.+.|+.++++.+...+. ....
T Consensus 220 ~~~~~~~~~~g~~~~~~~~~gt~~~~~~~al~~al~~~-~~~~~~~~~~~~~l~~~l~~~l~~~~~v~~~~~~~~~~p~~ 298 (402)
T TIGR02006 220 PRVRLEALIHGGGHERGMRSGTLPTHQIVGMGEAFRIA-KEEMAQDTAHVLALRDRLLNGIKSIEEVYLNGDLEHRVPGN 298 (402)
T ss_pred CCCCCCceecCCCccCCccCCCccHHHHHHHHHHHHHH-HHhHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCccccCCCe
Confidence 21110110000000001112455666666666666532 24577788899999999999999887765321111 1111
Q ss_pred EEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCC-------------------CCeEEEEee--CChhhHHHHHH
Q 014936 341 VMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGL-------------------KNWLRVTFA--VDPYSLEECLD 399 (415)
Q Consensus 341 ~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~-------------------~~~iRi~~~--~~~~~l~~~l~ 399 (415)
+.+.++. .+...+...+ ++|.+..|..|.. .+++|+|++ ++++|++.+++
T Consensus 299 ~~v~f~~------~~~~~~~~~l---~~i~v~~G~~c~~~~~~~~~~l~~lg~~~~~~~~~vR~S~~~~~t~edid~l~~ 369 (402)
T TIGR02006 299 LNVSFNY------VEGESLIMAL---KDLAVSSGSACTSASLEPSYVLRALGINDELAHSSIRFTIGRFTTEEEIDYAVK 369 (402)
T ss_pred EEEEEeC------cCHHHHHHhc---CCEEEechhhcCCCCCCccHHHHHcCCChhhcCceEEEEecCCCCHHHHHHHHH
Confidence 1222321 1233443332 4888888877642 378999995 68999999999
Q ss_pred HHHHHHHHHH
Q 014936 400 RIKSFYQRHA 409 (415)
Q Consensus 400 ~l~~~~~~~~ 409 (415)
.|+++++.++
T Consensus 370 ~l~~~~~~~~ 379 (402)
T TIGR02006 370 LVKSAIDKLR 379 (402)
T ss_pred HHHHHHHHHH
Confidence 9999887753
No 165
>PRK12381 bifunctional succinylornithine transaminase/acetylornithine transaminase; Provisional
Probab=99.96 E-value=5.1e-26 Score=215.74 Aligned_cols=345 Identities=19% Similarity=0.160 Sum_probs=229.1
Q ss_pred ccCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCC--CCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCCh
Q 014936 32 KNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKF--NGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGC 109 (415)
Q Consensus 32 ~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~--~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~ 109 (415)
.+++.++||..|.-....+.. +|.+.+|+.+++..... ..|.. ....++.+.+++.. ..++++++++|
T Consensus 36 ~dG~~~lD~~~g~~~~~lGh~-~p~v~~A~~~~~~~~~~~~~~~~~-~~~~~la~~l~~~~--------~~~~v~~~~sG 105 (406)
T PRK12381 36 QQGKEYIDFAGGIAVNALGHA-HPALREALNEQASKFWHTGNGYTN-EPVLRLAKKLIDAT--------FADRVFFCNSG 105 (406)
T ss_pred CCCCEEEEcCcCHhhccCCCC-CHHHHHHHHHHHhhcccccCccCC-HHHHHHHHHHHhhC--------CCCeEEEcCCc
Confidence 347789999886432222333 89999999999874211 11211 12344555555543 24799999999
Q ss_pred HHHHHHHHHHhc--------CCCCEEEEcCCCCcchHHHHHhCCCeEEE----eeccC--CCCCCCChhHHHhhcCCCce
Q 014936 110 TQAIDVAMALLS--------RPGANILLPRPGFPIYELSAAFRHIEVRH----FDLLP--DKGWEVDLDDIESLADQNTV 175 (415)
Q Consensus 110 ~~al~~~~~~l~--------~~gd~vi~~~p~y~~~~~~~~~~g~~~~~----~~~~~--~~~~~~~~~~l~~~~~~~~~ 175 (415)
++|++.+++... .....|+..+.+|++....+...+..... .+..+ ....-.|++.+++.+++++.
T Consensus 106 seA~e~Alk~ar~~~~~~~~~~r~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~a 185 (406)
T PRK12381 106 AEANEAALKLARKYAHDRYGSHKSGIVAFKNAFHGRTLFTVSAGGQPKYSQDFAPLPPDIRHAAYNDLNSASALIDDQTC 185 (406)
T ss_pred HHHHHHHHHHHHHHHhhcCCCCCCeEEEECCCcCCcchhHHhhcCCcccccCCCCCCCCeeEeCCCCHHHHHHhccCCee
Confidence 999999999863 13467999999999876554433321110 00000 00011478999998876666
Q ss_pred EEEecCCCCccccCC--CHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCce
Q 014936 176 ALVIINPGNPCGNVY--SYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWR 253 (415)
Q Consensus 176 ~v~i~~p~nptG~~~--~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r 253 (415)
++++ +|.|++|-++ +.+.+++|.++|++||+++|+||+|.++.+.|... ....++.... +.|+||.++ +|+|
T Consensus 186 avii-EPv~~~gg~~~~~~~~l~~l~~l~~~~~~llI~DEv~tG~gr~G~~~-~~~~~~v~pD---i~t~sK~l~-gG~~ 259 (406)
T PRK12381 186 AVIV-EPIQGEGGVIPADKAFLQGLRELCDRHNALLIFDEVQTGVGRTGELY-AYMHYGVTPD---VLTTAKALG-GGFP 259 (406)
T ss_pred EEEE-eCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEcchhhCCCCCcchh-hhHhhCCCCC---EEEehhhhh-CCCc
Confidence 5555 8999887654 78999999999999999999999998876666432 2222222222 348999975 7999
Q ss_pred EEEEEeeCCCCCCChHHHHHHHHhhc-cccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCC-CCcC
Q 014936 254 LGWFVTTDPCGMFRKPKVVERMKKYF-DILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIP-CISC 331 (415)
Q Consensus 254 ~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~-~~~~ 331 (415)
+||+++++ ++++.+.... ..+++.+++.+.++.+.|+.. .-++..++++++.+++.+.|+++. ....
T Consensus 260 ig~~~~~~--------~~~~~~~~~~~~~t~~~~pl~~aaa~a~l~~l---~~~~~~~~~~~~~~~l~~~L~~l~~~~~~ 328 (406)
T PRK12381 260 IGAMLTTE--------KCASVMTVGTHGTTYGGNPLASAVAGKVLELI---NTPEMLNGVKQRHDWFVERLNTINARYGL 328 (406)
T ss_pred eEEEEEcH--------HHHhhcCCCCCCCCCCCCHHHHHHHHHHHHHH---hhccHHHHHHHHHHHHHHHHHHHHhhCCC
Confidence 99999865 6777775532 334577889999888877542 123567888888888888887651 1221
Q ss_pred C-CCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEee--CChhhHHHHHHHHHHHHHHH
Q 014936 332 P-HKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFA--VDPYSLEECLDRIKSFYQRH 408 (415)
Q Consensus 332 ~-~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~--~~~~~l~~~l~~l~~~~~~~ 408 (415)
+ ..+..|.++++.++... ......+...+.++||.+.+.. ++.+|++++ .+++++++++++|.++++++
T Consensus 329 ~~~vrg~Gl~~~~~l~~~~----~~~~~~~~~~l~~~Gv~v~~~g----~~~lRl~p~~~~t~~~i~~~~~~l~~~l~~~ 400 (406)
T PRK12381 329 FSEIRGLGLLIGCVLNAEY----AGKAKQISQEAAKAGVMVLIAG----PNVVRFAPALNISEEEITTGLDRFARACERF 400 (406)
T ss_pred EEEEecCeEEEEEEecCch----hhHHHHHHHHHHHCCcEEeeCC----CCEEEEeCCccCCHHHHHHHHHHHHHHHHHH
Confidence 1 12355788888775310 0122334445567899997642 468999984 78999999999999999876
Q ss_pred HHH
Q 014936 409 AKQ 411 (415)
Q Consensus 409 ~~~ 411 (415)
.++
T Consensus 401 ~~~ 403 (406)
T PRK12381 401 VSR 403 (406)
T ss_pred Hhc
Confidence 554
No 166
>PRK08247 cystathionine gamma-synthase; Reviewed
Probab=99.95 E-value=9.6e-26 Score=210.55 Aligned_cols=290 Identities=19% Similarity=0.193 Sum_probs=205.9
Q ss_pred CCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHH----HHHhCC
Q 014936 70 FNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYEL----SAAFRH 145 (415)
Q Consensus 70 ~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~----~~~~~g 145 (415)
+.+|+++ ...+|++.+|++.+ .+..++++|+++++.+++ .++++||+|+++.|+|++... .+...|
T Consensus 46 y~r~~~p-t~~~le~~la~l~g--------~~~~~~~~sG~~ai~~~~-~ll~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G 115 (366)
T PRK08247 46 YSRTGNP-TRGVLEQAIADLEG--------GDQGFACSSGMAAIQLVM-SLFRSGDELIVSSDLYGGTYRLFEEHWKKWN 115 (366)
T ss_pred ccCCCCc-hHHHHHHHHHHHhC--------CCcEEEEcCHHHHHHHHH-HHhCCCCEEEEecCCcCcHHHHHHHHhhccC
Confidence 4566664 57899999999982 234578888899999876 567899999999999997533 445689
Q ss_pred CeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCc
Q 014936 146 IEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPF 225 (415)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~ 225 (415)
+++..++. .|++.+++++++++++|++++|+||+|.. .++++|+++|+++|+++|+|++|......
T Consensus 116 ~~v~~vd~-------~d~~~l~~~i~~~tklv~le~P~NP~~~~---~dl~~I~~la~~~g~~lIvD~t~~~~~~~---- 181 (366)
T PRK08247 116 VRFVYVNT-------ASLKAIEQAITPNTKAIFIETPTNPLMQE---TDIAAIAKIAKKHGLLLIVDNTFYTPVLQ---- 181 (366)
T ss_pred ceEEEECC-------CCHHHHHHhcccCceEEEEECCCCCCCcH---HHHHHHHHHHHHcCCEEEEECCCcccccc----
Confidence 99888764 37899999998899999999999998665 89999999999999999999999643221
Q ss_pred ccccccCCCCCeEEEccCccccCC-CCceEEEEEeeCCCCCCChHHHHHHHHhhcc-ccCCchhHHHHHHHHhhCCCcHH
Q 014936 226 VPMGVFGSTVPILTLGSLSKRWIV-PGWRLGWFVTTDPCGMFRKPKVVERMKKYFD-ILGDPATFIQAAVPSILQQPDEV 303 (415)
Q Consensus 226 ~~~~~~~~~~~~i~~~s~sK~~~~-~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~a~~~~l~~~~~~ 303 (415)
.++. . ...+++.|+||.++. ++++.|++++++ .++.+.+..... .....++..+.++...|+.
T Consensus 182 ~p~~-~---g~di~i~S~sK~~~g~~d~~~G~iv~~~-------~~l~~~~~~~~~~~g~~~s~~~a~l~~~~l~t---- 246 (366)
T PRK08247 182 RPLE-E---GADIVIHSATKYLGGHNDVLAGLVVAKG-------QELCERLAYYQNAAGAVLSPFDSWLLIRGMKT---- 246 (366)
T ss_pred Cchh-c---CCcEEEeecceeccCCCceeeeEEecCh-------HHHHHHHHHHHHhcCCCCChHHHHHHHhccCc----
Confidence 1111 1 234899999999865 356899988753 246666655433 2345677777777777764
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCC-CCceEEEEecCccccCCCCCHHHHHHHH---------HhhcCeEEEc
Q 014936 304 FFKKTLNLLKQSVDICYNKIKEIPCISCPHKP-EGSMAVMLKLNLSLLDDIIDDIDFCFKL---------AKEESVIILP 373 (415)
Q Consensus 304 ~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p-~~g~~~~~~l~~~~~~~~~~~~~~~~~l---------l~~~gi~v~~ 373 (415)
+..+.++.+++++.+.+.|++.|++..+.+| .+|++.| .++.. .....++..+ .....+.+.|
T Consensus 247 -l~~r~~~~~~~a~~l~~~L~~~p~v~~v~~P~~gg~~sf-~~~~~-----~~~~~~~~~l~~~~~~~slg~~~sl~~~p 319 (366)
T PRK08247 247 -LALRMRQHEENAKAIAAFLNEQPGVTDVLYPGRGGMLSF-RLQDE-----EWVNPFLKSLKLITFAESLGGVESFITYP 319 (366)
T ss_pred -HHHHHHHHHHHHHHHHHHHHhCCCeeEEecCCcCcEEEE-EECCH-----HHHHHHHHcCCcceEccCCCCCceEEECC
Confidence 5566777899999999999998887755466 6777766 56410 0011222211 1123455567
Q ss_pred CCCCCC-------------CCeEEEEeeCChhhHHHHHHHHHHHHHH
Q 014936 374 GTAVGL-------------KNWLRVTFAVDPYSLEECLDRIKSFYQR 407 (415)
Q Consensus 374 g~~~~~-------------~~~iRi~~~~~~~~l~~~l~~l~~~~~~ 407 (415)
++.+.. ++-+|+|++.. +.+.+++.|.+++++
T Consensus 320 ~~~~~~~~~~~~r~~~gi~~~~~R~svGlE--~~~dl~~dl~~al~~ 364 (366)
T PRK08247 320 ATQTHADIPEEIRIANGVCNRLLRFSVGIE--NVEDLIADLKQAFKQ 364 (366)
T ss_pred cccccccCCHHHHHhcCCCCCeEEEEeccC--CHHHHHHHHHHHHhh
Confidence 654321 35799999874 566677777776653
No 167
>PRK13479 2-aminoethylphosphonate--pyruvate transaminase; Provisional
Probab=99.95 E-value=5e-26 Score=214.15 Aligned_cols=320 Identities=16% Similarity=0.142 Sum_probs=219.9
Q ss_pred CCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCC--CcEEEeCChHHHHHHHHHHhcCCCCEEE
Q 014936 51 FHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTP--NDVFVTSGCTQAIDVAMALLSRPGANIL 128 (415)
Q Consensus 51 ~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~--~~i~i~~g~~~al~~~~~~l~~~gd~vi 128 (415)
.++.+.+++++.+.. ......|. ....++|+.++++++ .++ +.+++++|+++++..++.++..+||.|+
T Consensus 14 ~~~~~~~~~a~~~~~-~~~~~~~~--~~~~~~~~~l~~l~~------~~~~~~~i~~~~~gt~~l~~~~~~l~~~~~~vl 84 (368)
T PRK13479 14 LTTSRTVREAMLRDW-GSWDDDFN--ALTASVRAKLVAIAT------GEEGYTCVPLQGSGTFSVEAAIGSLVPRDGKVL 84 (368)
T ss_pred CCCCHHHHHHhCCCC-CCCChHHH--HHHHHHHHHHHHHhC------CCCCceEEEEcCCcHHHHHHHHHhccCCCCeEE
Confidence 456788877775543 11111133 245677777777763 333 5688999999999999999999999999
Q ss_pred EcCCCCcchH--HHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCC--CceEEEecCCCCccccCCCHHHHHHHHHHHhh
Q 014936 129 LPRPGFPIYE--LSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ--NTVALVIINPGNPCGNVYSYQHLQKLAETANK 204 (415)
Q Consensus 129 ~~~p~y~~~~--~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~ 204 (415)
+..++|++.. ..++..|+++..++.+. ++.+|++++++.+++ +++++++++|+||||...| +++|.++|++
T Consensus 85 v~~~~~~~~~~~~~~~~~g~~~~~i~~~~--~~~~d~~~l~~~l~~~~~~~~v~~~~~~~~tG~~~~---~~~i~~l~~~ 159 (368)
T PRK13479 85 VPDNGAYGARIAQIAEYLGIAHVVLDTGE--DEPPDAAEVEAALAADPRITHVALVHCETTTGILNP---LDEIAAVAKR 159 (368)
T ss_pred EEeCCchHHHHHHHHHHcCCcEEEEECCC--CCCCCHHHHHHHHHhCCCCcEEEEEcccCccccccC---HHHHHHHHHH
Confidence 9988887653 67788999999998753 346899999998854 4567899999999999976 6688888889
Q ss_pred cCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCcccc-CCCCceEEEEEeeCCCCCCChHHHHHHHHhhc----
Q 014936 205 LKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRW-IVPGWRLGWFVTTDPCGMFRKPKVVERMKKYF---- 279 (415)
Q Consensus 205 ~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~-~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~---- 279 (415)
+|+++|+|++++.. ....++..++.+ +++.|++|++ +.+| +||+++++ ++++.+....
T Consensus 160 ~~~~livDa~~~~g----~~~~~~~~~~~d---~~v~s~~K~l~g~~G--~G~l~~~~--------~~~~~~~~~~~~~~ 222 (368)
T PRK13479 160 HGKRLIVDAMSSFG----AIPIDIAELGID---ALISSANKCIEGVPG--FGFVIARR--------SELEACKGNSRSLS 222 (368)
T ss_pred cCCEEEEEcccccC----CccccccccCce---EEEecCccccccCCC--ceEEEECH--------HHHHHhhcCCCCee
Confidence 99999999877542 222333333332 6678999975 5677 69999865 4444443321
Q ss_pred --------------cccCCchhHHHHHHHHhhCCCc-HHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCC---CceEE
Q 014936 280 --------------DILGDPATFIQAAVPSILQQPD-EVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPE---GSMAV 341 (415)
Q Consensus 280 --------------~~~~~~~~~~~~a~~~~l~~~~-~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~---~g~~~ 341 (415)
....+++...+.++.++++... ..++++..++++++++.+.+.|+++ ++..+ .+. .+..+
T Consensus 223 ~~~~~~~~~~~~~~~~~~t~~~~~~~~l~~al~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~~~~~~~~~ 300 (368)
T PRK13479 223 LDLYDQWAYMEKTGQWRFTPPTHVVAAFYQALLELEEEGGVPARGARYANNQRTLVAGMRAL-GFEPL-LDAEIQSPIIV 300 (368)
T ss_pred ecHHHHHhhhcccCCCCCCCcHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHc-CCccc-CCchhcCceEE
Confidence 1112455555555555554322 2346778899999999999999988 77633 221 11122
Q ss_pred EEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEe-e-CChhhHHHHHHHHHHHHHHH
Q 014936 342 MLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTF-A-VDPYSLEECLDRIKSFYQRH 408 (415)
Q Consensus 342 ~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~-~-~~~~~l~~~l~~l~~~~~~~ 408 (415)
.+.++... + .+..++...+ .++||.+.+|..+. .+++|+++ + .++++++.+++.|+++++++
T Consensus 301 ~~~~~~~~--~-~~~~~l~~~L-~~~gi~v~~g~~~~-~~~iRis~~~~~t~edi~~~l~~L~~~l~~~ 364 (368)
T PRK13479 301 TFHAPADP--A-YDFKEFYERL-KEQGFVIYPGKLTQ-VDTFRIGCIGDVDAADIRRLVAAIAEALYWM 364 (368)
T ss_pred EEECCCCC--C-cCHHHHHHHH-HHCCEEEecCCCCC-CCEEEEecCCCCCHHHHHHHHHHHHHHHHHc
Confidence 22333210 0 1345666665 56699999886542 46899986 4 58999999999999888753
No 168
>PRK13520 L-tyrosine decarboxylase; Provisional
Probab=99.95 E-value=1.7e-25 Score=211.04 Aligned_cols=325 Identities=18% Similarity=0.131 Sum_probs=222.2
Q ss_pred CCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcC----CCCE
Q 014936 51 FHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSR----PGAN 126 (415)
Q Consensus 51 ~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~----~gd~ 126 (415)
.+++|.+.+++.+.+..... ......+..++.+.+.+.+++..| .+++++++++|+++++..++.++.+ +|++
T Consensus 30 ~~~~~~~~~a~~~~~~~~~~-~~~~~~~~~~~~~~~~~~la~~~g--~~~~~~~~~~ggt~a~~~a~~~~~~~~~~~~~~ 106 (371)
T PRK13520 30 TEPHPIARKAHEMFLETNLG-DPGLFPGTAKLEEEAVEMLGELLH--LPDAYGYITSGGTEANIQAVRAARNLAKAEKPN 106 (371)
T ss_pred cCchHHHHHHHHHHHhcCCC-CcccCccHHHHHHHHHHHHHHHhC--CCCCCeEEecCcHHHHHHHHHHHHhhccCCCce
Confidence 34578888999888764211 111112334433444444444344 4556789999999999999877653 5789
Q ss_pred EEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcC
Q 014936 127 ILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLK 206 (415)
Q Consensus 127 vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~ 206 (415)
|++.++.|.++...++..|.++..++.+ .++.+|+++|+++++++++.+++++++|+||.+.| +++|.++|+++|
T Consensus 107 vl~~~~~h~s~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~~~~vi~~~~~~~tG~~~~---l~~I~~l~~~~g 181 (371)
T PRK13520 107 IVVPESAHFSFDKAADMLGVELRRAPLD--DDYRVDVKAVEDLIDDNTIGIVGIAGTTELGQVDP---IPELSKIALENG 181 (371)
T ss_pred EEecCcchHHHHHHHHHcCceEEEecCC--CCCcCCHHHHHHHHhhCCEEEEEEcCCcCCcccCC---HHHHHHHHHHcC
Confidence 9999999999999999899999998874 34568999999999888888888889999999955 788888889999
Q ss_pred cEEEEccccCCcccCC-CCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhhcc-----
Q 014936 207 TLVIADEVYGHLVFGD-KPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFD----- 280 (415)
Q Consensus 207 ~~li~De~~~~~~~~~-~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~----- 280 (415)
+++++|++|+.+...- .....+ .+....-..+..|.+|+ +.+|.++|+++..++ ++.+.+.....
T Consensus 182 ~~livD~a~~~~~~~~~~~~~~~-~~~~~~vd~~~~s~~K~-~~a~~~~G~~~~~~~-------~~~~~l~~~~~~~~~~ 252 (371)
T PRK13520 182 IFLHVDAAFGGFVIPFLDDPPNF-DFSLPGVDSITIDPHKM-GLAPIPAGGILFRDE-------SYLDALAVDTPYLTSK 252 (371)
T ss_pred CCEEEEecchhHHHHhhcCCCCc-cccCCCCceEEECCccc-cCccCCceEEEEcCH-------HHHHhhcccCccccCC
Confidence 9999999998765321 111111 11111111444577895 777889999887542 35454432110
Q ss_pred ----ccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCccccCCCCCH
Q 014936 281 ----ILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLDDIIDD 356 (415)
Q Consensus 281 ----~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~~~~~~~ 356 (415)
..++.+.....++..+|+...++.+++..++..++++++.+.|+++ ++..+..|. ..++.+.++ +.
T Consensus 253 ~~~~~~gt~~~~~~~~~~~al~~l~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~-~~~v~~~~~--------~~ 322 (371)
T PRK13520 253 KQATLTGTRSGAGVAATYAVMKYLGREGYRKVVERCMENTRWLAEELKER-GFEPVIEPV-LNIVAFDDP--------NP 322 (371)
T ss_pred CCcceEeeccChHHHHHHHHHhhhcHhHHHHHHHHHHHHHHHHHHHHHhC-CCEEecCCC-ceEEEEecC--------CH
Confidence 0112333455666666665445667888899999999999999988 776232443 446666554 34
Q ss_pred HHHHHHHHhhcCeEEEcCCCCCCCCeEEEEee--CChhhHHHHHHHHHHHHH
Q 014936 357 IDFCFKLAKEESVIILPGTAVGLKNWLRVTFA--VDPYSLEECLDRIKSFYQ 406 (415)
Q Consensus 357 ~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~--~~~~~l~~~l~~l~~~~~ 406 (415)
.++...| .++||.+.++. ..+++|+++. +++++++.+++.|+++++
T Consensus 323 ~~v~~~L-~~~gi~v~~~~---~~~~iRis~~~~~t~edi~~~~~~l~~~~~ 370 (371)
T PRK13520 323 DEVREKL-RERGWRVSVTR---CPEALRIVCMPHVTREHIENFLEDLKEVKK 370 (371)
T ss_pred HHHHHHH-HHCCceeccCC---CCCEEEEEEECCCCHHHHHHHHHHHHHHhh
Confidence 5666665 45699987643 2568999984 689999999999988764
No 169
>cd06450 DOPA_deC_like DOPA decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to DOPA/tyrosine decarboxylase (DDC), histidine decarboxylase (HDC), and glutamate decarboxylase (GDC). DDC is active as a dimer and catalyzes the decarboxylation of tyrosine. GDC catalyzes the decarboxylation of glutamate and HDC catalyzes the decarboxylation of histidine.
Probab=99.95 E-value=8e-27 Score=217.83 Aligned_cols=309 Identities=16% Similarity=0.113 Sum_probs=222.2
Q ss_pred cHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcC-----------
Q 014936 54 THVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSR----------- 122 (415)
Q Consensus 54 ~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~----------- 122 (415)
+..+.+.+...+.... ..|+...+..++++++++++.+.+|.+..++++++|+|+++++..++.++..
T Consensus 12 ~~~~~~~~~~~~n~~~-~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~~~ 90 (345)
T cd06450 12 PALLLEMLTSAKNAID-FTWDESPAATEMEAEVVNWLAKLFGLPSEDADGVFTSGGSESNLLALLAARDRARKRLKAGGG 90 (345)
T ss_pred HHHHHHHHHHhcCCCC-cccccCchhHHHHHHHHHHHHHHhCCCCCCCCEEEeCChhHHHHHHHHHHHHHhhhhhhcccc
Confidence 3455555666655444 3588778899999999999998888664556899999999999999988742
Q ss_pred -C--CCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCC------CceEEEecCCCCccccCCCHH
Q 014936 123 -P--GANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ------NTVALVIINPGNPCGNVYSYQ 193 (415)
Q Consensus 123 -~--gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~------~~~~v~i~~p~nptG~~~~~~ 193 (415)
+ ++.|+++.++|.++...+...|.+++.++.+++ +.+|+++|++.+++ +++++++++|+||||.+ +
T Consensus 91 ~~~~~~~v~~~~~~h~~~~~~~~~~g~~~~~v~~~~~--~~~d~~~l~~~i~~~~~~~~~~~~v~~~~~~~~tG~~---~ 165 (345)
T cd06450 91 RGIDKLVIVCSDQAHVSVEKAAAYLDVKVRLVPVDED--GRMDPEALEAAIDEDKAEGLNPIMVVATAGTTDTGAI---D 165 (345)
T ss_pred cccCCeEEEEcCcchhHHHHHHHHHhcCeEEeeeCCC--CCcCHHHHHHHHHHHHHCCCCcEEEEEecccCCCCCC---C
Confidence 2 347889999999998888888999999987543 36899999999876 77888999999999998 6
Q ss_pred HHHHHHHHHhhcCcEEEEccccCCcccCCCCccc-ccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHH
Q 014936 194 HLQKLAETANKLKTLVIADEVYGHLVFGDKPFVP-MGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVV 272 (415)
Q Consensus 194 ~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~-~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~ 272 (415)
++++|+++|+++|+++++|++|+.+.+....... ...+. .-..+..|++|+ +.++.++|+++.
T Consensus 166 ~~~~i~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~--~~d~~~~s~~K~-l~~p~g~g~~~~------------- 229 (345)
T cd06450 166 PLEEIADLAEKYDLWLHVDAAYGGFLLPFPEPRHLDFGIE--RVDSISVDPHKY-GLVPLGCSAVLV------------- 229 (345)
T ss_pred CHHHHHHHHHHhCCeEEEechhhHHHhhChhhHHHhcCcc--ccCEEEEchhHh-hCCCcchHHHHH-------------
Confidence 6899999999999999999999887643221111 11111 112556799997 456667777643
Q ss_pred HHHHhhccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCccccCC
Q 014936 273 ERMKKYFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLDD 352 (415)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~~~ 352 (415)
. ...+.++...+. ...++++.++..++++++.+.|++++++.++..+. +.++.+.++.....+
T Consensus 230 ~-------------~~~~~~~l~~l~---~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~-~~iv~f~~~~~~~~~ 292 (345)
T cd06450 230 R-------------ALKLWATLRRFG---RDGYGEHIDRIVDLAKYLAELIRADPGFELLGEPN-LSLVCFRLKPSVKLD 292 (345)
T ss_pred H-------------HHHHHHHHHHHh---HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCc-eeEEEEEECCcchhh
Confidence 1 344445555554 36688888999999999999999988877442344 445555554210000
Q ss_pred CCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEee--C-ChhhHHHHHHHHHH
Q 014936 353 IIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFA--V-DPYSLEECLDRIKS 403 (415)
Q Consensus 353 ~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~--~-~~~~l~~~l~~l~~ 403 (415)
.+..++...+ .++|+.+.++..+..+.++|++++ . +.++++.+++.|++
T Consensus 293 -~~~~~i~~~L-~~~g~~~~~~~~~~~~~~lRis~~~~~~t~~di~~l~~~l~~ 344 (345)
T cd06450 293 -ELNYDLSDRL-NERGGWHVPATTLGGPNVLRFVVTNPLTTRDDADALLEDIER 344 (345)
T ss_pred -HHHHHHHHHH-HhcCCEEEEeeEECCeEEEEEEecCCCCCHHHHHHHHHHHHh
Confidence 1234555555 566666555554445679999995 3 78999999999875
No 170
>TIGR02326 transamin_PhnW 2-aminoethylphosphonate--pyruvate transaminase. Members of this family are 2-aminoethylphosphonate--pyruvate transaminase. This enzyme acts on the most common type of naturally occurring phosphonate. It interconverts 2-aminoethylphosphonate plus pyruvate with 2-phosphonoacetaldehyde plus alanine. The enzyme phosphonoacetaldehyde hydrolase (EC 3.11.1.1), usually encoded by an adjacent gene, then cleaves the C-P bond of phosphonoacetaldehyde, adding water to yield acetaldehyde plus inorganic phosphate. Species with this pathway generally have an identified phosphonate ABC transporter but do not also have the multisubunit C-P lysase complex as found in Escherichia coli.
Probab=99.95 E-value=9.3e-26 Score=211.83 Aligned_cols=293 Identities=14% Similarity=0.136 Sum_probs=209.2
Q ss_pred cHHHHHHHHHHHhhhCCCCCCC--CcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcch--HHHHHhCCCeEEEeecc
Q 014936 79 LPLTRRAIAEYLSRDLPYKLTP--NDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIY--ELSAAFRHIEVRHFDLL 154 (415)
Q Consensus 79 ~~~lr~~ia~~~~~~~~~~~~~--~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~--~~~~~~~g~~~~~~~~~ 154 (415)
..++|+.+++++ ++++ +.|++|+|+|++++.++.++..+||.+++..+++++. ...++..|.+++.++.+
T Consensus 37 ~~~~r~~la~l~------~~~~~~~~i~~t~~~t~al~~~~~~l~~~~~~vlv~~~~~~~~~~~~~a~~~g~~~~~v~~~ 110 (363)
T TIGR02326 37 VEQIRQQLLALA------TAEEGYTSVLLQGSGTFAVEAVIGSAVPKDGKLLVVINGAYGARIVQIAEYLGIPHHVVDTG 110 (363)
T ss_pred HHHHHHHHHHHh------CCCCCceEEEEcCCCHHHHHHHHHhcCCCCCeEEEEeCChhhHHHHHHHHHcCCceEEEeCC
Confidence 345677777776 3444 4799999999999999999988888887776666554 36678899999998874
Q ss_pred CCCCCCCChhHHHhhcCC--CceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccC
Q 014936 155 PDKGWEVDLDDIESLADQ--NTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFG 232 (415)
Q Consensus 155 ~~~~~~~~~~~l~~~~~~--~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~ 232 (415)
+ ++.+|++.++++++. +++.+.+++++||||..+| +++|+++|+++|+++++|++++. |..+.++..++
T Consensus 111 ~--~~~~d~~~l~~~l~~~~~~~~v~~~~~~~~tG~~~~---i~~I~~l~~~~g~~livD~~~~~----g~~~~~~~~~~ 181 (363)
T TIGR02326 111 E--VEPPDVVEVEAILAADPAITHIALVHCETTTGILNP---IEAVAKLAHRHGKVTIVDAMSSF----GGIPIDIAELH 181 (363)
T ss_pred C--CCCCCHHHHHHHHhhCCCccEEEEEeecCCccccCc---HHHHHHHHHHcCCEEEEEccccc----cCcccchhhcC
Confidence 3 446899999998864 3467888999999999976 67889999999999999999875 22233444444
Q ss_pred CCCCeEEEccCcccc-CCCCceEEEEEeeCCCCCCChHHHHHHHHh---------------h----ccccCCchhHHHHH
Q 014936 233 STVPILTLGSLSKRW-IVPGWRLGWFVTTDPCGMFRKPKVVERMKK---------------Y----FDILGDPATFIQAA 292 (415)
Q Consensus 233 ~~~~~i~~~s~sK~~-~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~---------------~----~~~~~~~~~~~~~a 292 (415)
.+ ++++|++|++ +.+| +||+++++ +.++.+.. . ....++++...+.+
T Consensus 182 ~D---~~~~s~~K~l~~p~G--~G~l~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ft~~~~~~~a 248 (363)
T TIGR02326 182 ID---YLISSANKCIQGVPG--FGFVIARQ--------AELAACKGNARSLSLDLYDQWRCMEDNHGKWRFTSPTHVVHA 248 (363)
T ss_pred cc---EEEecCccccccCCc--ceEEEECH--------HHHHHhhcCCCceeecHHHHHHHHhccCCCCCCCCcHHHHHH
Confidence 33 7788999986 3456 79999865 33333211 0 00123556677777
Q ss_pred HHHhhCCCcHH-HHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCC--CCceEEEEecCccccCCCCCHHHHHHHHHhhcCe
Q 014936 293 VPSILQQPDEV-FFKKTLNLLKQSVDICYNKIKEIPCISCPHKP--EGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESV 369 (415)
Q Consensus 293 ~~~~l~~~~~~-~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p--~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi 369 (415)
+.++++...+. .+++..++++++++++.+.|+++ ++..+..+ ..+...++.++... + .+..++...+ +++||
T Consensus 249 l~~al~~l~~~g~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~v~~~L-~~~gi 323 (363)
T TIGR02326 249 FAQALLELEKEGGVAARHQRYQQNQKTLVAGMRAL-GFEPLLDDEIQSPIITSFYSPEDP--D-YRFADFYQRL-KEQGF 323 (363)
T ss_pred HHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHc-CCeeccCcccCCceEEEEECCCCC--C-CCHHHHHHHH-HHCCE
Confidence 77666543222 46778899999999999999887 66633222 34445677665310 0 1344555555 67799
Q ss_pred EEEcCCCCCCCCeEEEEe-e-CChhhHHHHHHHHHHHH
Q 014936 370 IILPGTAVGLKNWLRVTF-A-VDPYSLEECLDRIKSFY 405 (415)
Q Consensus 370 ~v~~g~~~~~~~~iRi~~-~-~~~~~l~~~l~~l~~~~ 405 (415)
.+.||..+. .++|||++ + .+.++++.+++.|++++
T Consensus 324 ~v~~g~~~~-~~~iRi~~~~~~~~edv~~~l~~l~~~l 360 (363)
T TIGR02326 324 VIYPGKVSQ-VDCFRIGNIGEVDAADITRLLTAIGKAM 360 (363)
T ss_pred EEECCcCCC-CCEEEEecCCCCCHHHHHHHHHHHHHHh
Confidence 999997653 57999997 4 68999999999998875
No 171
>PLN02242 methionine gamma-lyase
Probab=99.95 E-value=8.7e-26 Score=212.97 Aligned_cols=219 Identities=16% Similarity=0.147 Sum_probs=168.1
Q ss_pred CCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHH-----HhCCCeEEEe
Q 014936 77 AGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSA-----AFRHIEVRHF 151 (415)
Q Consensus 77 ~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~-----~~~g~~~~~~ 151 (415)
....+|++.+|+++ ..+.+++++||++|+..++.+++++||+|+++.|.|+.+...+ +..|+++..+
T Consensus 76 Pt~~~LE~~lA~l~--------g~~~~l~~~sG~~Ai~~al~al~~~GD~Vl~~~~~Y~~~~~~~~~~~~~~~G~~~~~~ 147 (418)
T PLN02242 76 PTVLNLGRQMAALE--------GTEAAYCTASGMSAISSVLLQLCSSGGHVVASNTLYGGTHALLAHFLPRKCNITTTFV 147 (418)
T ss_pred hhHHHHHHHHHHHh--------CCCeEEEEccHHHHHHHHHHHHhCCCCEEEEcCCcHHHHHHHHHHhhhhccCceEEEc
Confidence 46789999999987 4567789999999999999999999999999999998876654 3467777665
Q ss_pred eccCCCCCCCChhHHHhhcCC-CceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccc
Q 014936 152 DLLPDKGWEVDLDDIESLADQ-NTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGV 230 (415)
Q Consensus 152 ~~~~~~~~~~~~~~l~~~~~~-~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~ 230 (415)
+. .|++.+++++++ ++++|++++|+||||.+. ++++|+++|+++|+++|+|++|..+.+.. ..
T Consensus 148 d~-------~d~e~l~~~i~~~~tklV~lesp~NPtG~v~---dl~~I~~la~~~gi~livDea~~~~~~~~------~~ 211 (418)
T PLN02242 148 DI-------TDLEAVKKAVVPGKTKVLYFESISNPTLTVA---DIPELARIAHEKGVTVVVDNTFAPMVLSP------AR 211 (418)
T ss_pred CC-------CCHHHHHHhcCcCCCEEEEEecCCCCCCccc---CHHHHHHHHHHhCCEEEEECCCCccCCCH------HH
Confidence 43 379999999988 499999999999999995 68888999999999999999998755421 12
Q ss_pred cCCCCCeEEEccCccccCCCCce-EEEEEeeCCCCCCChHHHHHHHHhhcc---ccCCchhHHHHHHHHhhCCCcHHHHH
Q 014936 231 FGSTVPILTLGSLSKRWIVPGWR-LGWFVTTDPCGMFRKPKVVERMKKYFD---ILGDPATFIQAAVPSILQQPDEVFFK 306 (415)
Q Consensus 231 ~~~~~~~i~~~s~sK~~~~~G~r-~G~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~a~~~~l~~~~~~~~~ 306 (415)
++ ..+++.|+||.++++|++ .||+++++ ++++.++.... ...+.....|.|...++.. ..+.
T Consensus 212 ~g---~divv~S~SK~l~g~g~~~gG~iv~~~--------~li~~l~~~~~~~~~~~g~~~~~~~A~l~~~~l---~tl~ 277 (418)
T PLN02242 212 LG---ADVVVHSISKFISGGADIIAGAVCGPA--------ELVNSMMDLHHGALMLLGPTMNPKVAFELSERL---PHLS 277 (418)
T ss_pred cC---CcEEEEeCccccCCCCCceEEEEEcCH--------HHHHHHHHHhhhhhhccCCCCCHHHHHHHHcCC---CcHH
Confidence 22 348899999999999988 58888754 56666665422 1233444455666555543 3466
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCCcCCCCC
Q 014936 307 KTLNLLKQSVDICYNKIKEIPCISCPHKP 335 (415)
Q Consensus 307 ~~~~~~~~~~~~l~~~l~~~~~~~~~~~p 335 (415)
.+.++++++++.+.+.|+++ ++. +.+|
T Consensus 278 ~r~~~~~~~a~~la~~L~~~-~~~-V~yP 304 (418)
T PLN02242 278 LRMKEHCRRAMEYAKRMKEL-GLK-VIYP 304 (418)
T ss_pred HHHHHHHHHHHHHHHHHHhC-CCE-EECC
Confidence 67789999999999999987 455 3344
No 172
>TIGR00713 hemL glutamate-1-semialdehyde-2,1-aminomutase. This enzyme, glutamate-1-semialdehyde-2,1-aminomutase (glutamate-1-semialdehyde aminotransferase, GSA aminotransferase), contains a pyridoxal phosphate attached at a Lys residue at position 283 of the seed alignment. It is in the family of class III aminotransferases.
Probab=99.95 E-value=4.8e-26 Score=217.67 Aligned_cols=345 Identities=17% Similarity=0.121 Sum_probs=227.1
Q ss_pred ccCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHH
Q 014936 32 KNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQ 111 (415)
Q Consensus 32 ~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~ 111 (415)
.+|+.++|+..|...... -..+|.+.+++++++...... +.+..+..+|+++|++++. ..+++++++|+++
T Consensus 45 ~dG~~ylD~~~g~~~~~l-Gh~~p~v~~ai~~q~~~~~~~-~~~~~~~~~lae~l~~~~~-------~~~~v~~~~sGse 115 (423)
T TIGR00713 45 VDGNEYIDYVLSWGPLIL-GHAHPRVVEAVKEALERGTSY-GAPTEAEILLAKEIISRVP-------SVEMVRFVNSGTE 115 (423)
T ss_pred CCCCEEEEcccccccccc-CCCCHHHHHHHHHHHHhCCcC-CCCCHHHHHHHHHHHHhCC-------cccEEEEeCCHHH
Confidence 358899999988754321 135799999999998865432 2244577899999999872 2368999999999
Q ss_pred HHHHHHHHhc--CCCCEEEEcCCCCcchHHHHHh---CCCeEEEeeccCC-------CCC---CCChhHHHhhcC---CC
Q 014936 112 AIDVAMALLS--RPGANILLPRPGFPIYELSAAF---RHIEVRHFDLLPD-------KGW---EVDLDDIESLAD---QN 173 (415)
Q Consensus 112 al~~~~~~l~--~~gd~vi~~~p~y~~~~~~~~~---~g~~~~~~~~~~~-------~~~---~~~~~~l~~~~~---~~ 173 (415)
|+..+++... ...++|+...++|+++...+.. .+......+..+. ... ..|++++++.++ .+
T Consensus 116 A~e~Alk~ar~~~gr~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~ 195 (423)
T TIGR00713 116 ATMSAVRLARGYTGRDKIIKFEGCYHGHHDALLVKAGSGAATLGLPTSPGVPEDFAKLTLVLPYNDLEALEEVFEEYGEE 195 (423)
T ss_pred HHHHHHHHHHHhhCCCEEEEEcCCCCCChhhhhccccCcccccCCCCCCCCCcccccceEEeCCCCHHHHHHHHHHcCCc
Confidence 9999998643 2348999999999997654432 1111110111000 000 027889988875 34
Q ss_pred ceEEEec-CCCCccccCCC-HHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCC
Q 014936 174 TVALVII-NPGNPCGNVYS-YQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPG 251 (415)
Q Consensus 174 ~~~v~i~-~p~nptG~~~~-~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G 251 (415)
++++++. .|+| +|.+++ .+.+++|.++|++||+++|+||+|.++.++...... .++...+ +.+|||.++ +|
T Consensus 196 ~aavi~ep~~~~-~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~r~g~~~~~~--~~~~~pD---i~t~sK~l~-~G 268 (423)
T TIGR00713 196 IAGVIVEPVAGN-MGVVPPKPEFLAGLRALTEEYGSLLIFDEVMTGFRVALGGAQE--YFGVEPD---LTTLGKIIG-GG 268 (423)
T ss_pred EEEEEEeCCCCC-CCCcCCCHHHHHHHHHHHHHhCCEEEEEccccccccCcchhHH--HhCCCcc---hhhhhhhhc-CC
Confidence 5666663 6677 788877 689999999999999999999999887432211111 1222222 337999986 89
Q ss_pred ceEEEEEeeCCCCCCChHHHHHHHHhh----ccccCCchhHHHHHHHHhhCCCc-HHHHHHHHHHHHHHHHHHHHHhhcC
Q 014936 252 WRLGWFVTTDPCGMFRKPKVVERMKKY----FDILGDPATFIQAAVPSILQQPD-EVFFKKTLNLLKQSVDICYNKIKEI 326 (415)
Q Consensus 252 ~r~G~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~a~~~~l~~~~-~~~~~~~~~~~~~~~~~l~~~l~~~ 326 (415)
+|+||+++++ ++++.+... ...+++.+++++.++.+.|+... ++..++..+..+.+++.+.+.++++
T Consensus 269 ~pig~v~~~~--------~i~~~~~~~~~~~~~~T~~~~~~~~aaa~a~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 340 (423)
T TIGR00713 269 LPVGAFGGRR--------EIMERLAPEGPVYQAGTLSGNPLAMAAGLATLKLLDEEGVYTELDELAKRLAEGLSEVLEDT 340 (423)
T ss_pred CceeeeeEHH--------HHHHhhCcCCCeeeccCCCCCHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHhc
Confidence 9999999975 677777531 22345789999998888886432 2356666677777777777777776
Q ss_pred CCCcCCCCCCCceEEEEecCccccCC-----CCCH---HHHHHHHHhhcCeEEEcCCCCCCCCeEEEEeeCChhhHHHHH
Q 014936 327 PCISCPHKPEGSMAVMLKLNLSLLDD-----IIDD---IDFCFKLAKEESVIILPGTAVGLKNWLRVTFAVDPYSLEECL 398 (415)
Q Consensus 327 ~~~~~~~~p~~g~~~~~~l~~~~~~~-----~~~~---~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~~~l~~~l 398 (415)
++... ....|.++.+.+......+ ..+. ..+...++ ++||.+.++. + +.+|+++..+++++++++
T Consensus 341 -~~~~~-v~~~g~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~~-~---~~~~l~~~~t~~~i~~~~ 413 (423)
T TIGR00713 341 -GIPHT-VNRVGSMFSLFFTEEEVTNYADAKKSDTELFAKFFHEML-DKGVFLPPSQ-F---EACFLSAAHTEEDIENTI 413 (423)
T ss_pred -CCCeE-EEeeccEEEEEEecCCCCChhhhhcccHHHHHHHHHHHH-HCCeEEecCC-c---cceeeECCCCHHHHHHHH
Confidence 44311 1223434443343211000 0011 24555554 5799987542 2 458999888999999999
Q ss_pred HHHHHHHHH
Q 014936 399 DRIKSFYQR 407 (415)
Q Consensus 399 ~~l~~~~~~ 407 (415)
++|.+++++
T Consensus 414 ~~l~~~l~~ 422 (423)
T TIGR00713 414 EAAEEVFAE 422 (423)
T ss_pred HHHHHHHhh
Confidence 999988864
No 173
>PRK07504 O-succinylhomoserine sulfhydrylase; Reviewed
Probab=99.95 E-value=6e-25 Score=206.81 Aligned_cols=228 Identities=19% Similarity=0.241 Sum_probs=167.5
Q ss_pred CCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHH----HHhCC
Q 014936 70 FNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELS----AAFRH 145 (415)
Q Consensus 70 ~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~----~~~~g 145 (415)
+.+|+++ ...+|++.+|++++ .+..+++++|++++..++.+++++||+|+++.+.|..+... +...|
T Consensus 59 y~r~~~p-~~~~Le~~lA~l~G--------~~~~~~~~sG~~Ai~~~l~~~l~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G 129 (398)
T PRK07504 59 YSRYSNP-TVDMFEKRMCALEG--------AEDARATASGMAAVTAAILCQVKAGDHVVAARALFGSCRYVVETLLPRYG 129 (398)
T ss_pred eecCCCc-hHHHHHHHHHHHhC--------CCeeeEecCHHHHHHHHHHHHhCCCCEEEEcCCchhHHHHHHHHHHhhcC
Confidence 3456553 56899999999982 33445677889999888888889999999999999975543 34568
Q ss_pred CeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCc
Q 014936 146 IEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPF 225 (415)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~ 225 (415)
+++..++ ..|++++++++++++++|++++|+||+|.+.+ +++|.++|+++|+++|+|++|+...+.
T Consensus 130 ~~v~~vd-------~~d~e~l~~ai~~~tklV~lesp~NptG~v~d---l~~I~~la~~~gi~lvvD~a~a~~~~~---- 195 (398)
T PRK07504 130 IESTLVD-------GLDLDNWEKAVRPNTKVFFLESPTNPTLEVID---IAAVAKIANQAGAKLVVDNVFATPLFQ---- 195 (398)
T ss_pred eEEEEEC-------CCCHHHHHHhcCcCceEEEEECCCCCCcEecC---HHHHHHHHHHcCCEEEEECCccccccC----
Confidence 8887774 26899999999999999999999999999976 777888888999999999999865432
Q ss_pred ccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhh-ccccCCchhHHHHHHHHhhCCCcHHH
Q 014936 226 VPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKY-FDILGDPATFIQAAVPSILQQPDEVF 304 (415)
Q Consensus 226 ~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~a~~~~l~~~~~~~ 304 (415)
.++ .++. .+++.|+||.++.+|+++|++++.++. .+.+.++.. .......++.....+...|+.
T Consensus 196 ~~~-~~ga---Divv~S~sK~l~g~g~~~GG~vv~~~~------~i~~~~~~~~~~~g~~~s~~~A~~~l~~L~t----- 260 (398)
T PRK07504 196 KPL-ELGA---HIVVYSATKHIDGQGRCLGGVVLSDKA------WIEEHLQDYFRHTGPSLSPFNAWTLLKGLET----- 260 (398)
T ss_pred Cch-hhCC---CEEEeeccccccCCccceEEEEEeCcH------HHHHHHHHHHHHhCCCCCHHHHHHHHhccch-----
Confidence 111 2232 378899999999999999765544321 232334432 233345666666666666654
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCCCcCCCCC
Q 014936 305 FKKTLNLLKQSVDICYNKIKEIPCISCPHKP 335 (415)
Q Consensus 305 ~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p 335 (415)
+..+.++..++...+.+.|++.|++..+.+|
T Consensus 261 l~~R~~~~~~na~~la~~L~~~p~v~~v~yp 291 (398)
T PRK07504 261 LPVRVRQQTESAAAIADFLAGHPKVARVIYP 291 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCccEEECC
Confidence 6777778888999999999887766534343
No 174
>PRK06767 methionine gamma-lyase; Provisional
Probab=99.95 E-value=2.3e-25 Score=209.37 Aligned_cols=290 Identities=16% Similarity=0.157 Sum_probs=201.3
Q ss_pred CCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHH----HhCC
Q 014936 70 FNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSA----AFRH 145 (415)
Q Consensus 70 ~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~----~~~g 145 (415)
+.+|+++ ...+|++.+|++++ .+..+++++|++++..++.+++++||+|+++.|.|......+ ...|
T Consensus 55 y~r~~~p-t~~~Le~~lA~l~G--------~~~al~~~sG~~Ai~~~l~al~~~Gd~Vv~~~~~y~~~~~~~~~~~~~~g 125 (386)
T PRK06767 55 YSRLGNP-TVKLFEERMAVLEG--------GEEALAFGSGMAAISATLIGFLKAGDHIICSNGLYGCTYGFLEVLEEKFM 125 (386)
T ss_pred ccCCCCc-chHHHHHHHHHHhC--------CCcEEEECCHHHHHHHHHHHHhCCCCEEEEcCCcHHHHHHHHHHHHhhcC
Confidence 4466664 46899999999983 345566667778999999999999999999999998765543 3346
Q ss_pred CeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCc
Q 014936 146 IEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPF 225 (415)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~ 225 (415)
+++..++. .|++++++++++++++|++++|+||||.+.+ +++|.++|+++|+++|+|++|+...+.
T Consensus 126 i~~~~~~~-------~d~~~l~~~i~~~tklV~lesp~NptG~v~d---l~~I~~la~~~g~~vivD~a~a~~~~~---- 191 (386)
T PRK06767 126 ITHSFCDM-------ETEADIENKIRPNTKLIFVETPINPTMKLID---LKQVIRVAKRNGLLVIVDNTFCSPYLQ---- 191 (386)
T ss_pred eEEEEeCC-------CCHHHHHHhhCcCceEEEEeCCCCCCceecC---HHHHHHHHHHcCCEEEEECCCcccccC----
Confidence 65554432 3789999999889999999999999999976 677788888999999999999753321
Q ss_pred ccccccCCCCCeEEEccCccccCCCCceE-EEEEeeCCCCCCChHHHHHHHHh-hc-cccCCchhHHHHHHHHhhCCCcH
Q 014936 226 VPMGVFGSTVPILTLGSLSKRWIVPGWRL-GWFVTTDPCGMFRKPKVVERMKK-YF-DILGDPATFIQAAVPSILQQPDE 302 (415)
Q Consensus 226 ~~~~~~~~~~~~i~~~s~sK~~~~~G~r~-G~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~a~~~~l~~~~~ 302 (415)
.++ ..+. .+++.|+||.++.+|.++ ||+++++ +.++.+.. .. ......++..+.++...|+.
T Consensus 192 ~pl-~~g~---Div~~S~sK~l~g~g~~~gG~v~~~~--------~~i~~~~~~~~~~~g~~~~~~~a~l~~~~L~t--- 256 (386)
T PRK06767 192 RPL-ELGC---DAVVHSATKYIGGHGDVVAGVTICKT--------RALAEKIRPMRKDIGGIMAPFDAWLLLRGLKT--- 256 (386)
T ss_pred Cch-hcCC---cEEEecCcceecCCCCceeEEEEeCh--------HHHHHHHHHHHHHhCCCCCHHHHHHHHcCCCc---
Confidence 122 1222 277889999998889886 7888765 44544332 22 22334466655665555543
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCC----------CceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEE
Q 014936 303 VFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPE----------GSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIIL 372 (415)
Q Consensus 303 ~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~----------~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~ 372 (415)
+..+.++.++++..+.+.|+++|++..+.+|. .|..+.+.++.. ..+..+++..+ +..++.++
T Consensus 257 --l~~r~~~~~~~a~~la~~L~~~p~v~~v~~p~~~~~~~~~~~~gg~vsf~l~~~----~~~~~~f~~~l-~~~~~~~s 329 (386)
T PRK06767 257 --LAVRMDRHCDNAEKIVSFLKNHDAVEGVWYPEGELASRQMKRGGGVISFSIKGG----KEETQAFINDL-HFITIAVS 329 (386)
T ss_pred --HHHHHHHHHHHHHHHHHHHHcCCCccEEECCCcHHHHHhCCCCCceEEEEEcCC----HHHHHHHHHhC-CccEEecC
Confidence 55677888999999999999999887554442 233455556421 11344555554 66677776
Q ss_pred cCCCCCC-----------------------CCeEEEEeeCChhhHHHHHHHHHHHHH
Q 014936 373 PGTAVGL-----------------------KNWLRVTFAVDPYSLEECLDRIKSFYQ 406 (415)
Q Consensus 373 ~g~~~~~-----------------------~~~iRi~~~~~~~~l~~~l~~l~~~~~ 406 (415)
-|..... ++.||+|++.. +.+.+++.|.+++.
T Consensus 330 ~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~l~R~svGlE--~~~dl~~dl~~al~ 384 (386)
T PRK06767 330 LGDTETLIQHPATMTHAAIPAELRQEMGIYDNLIRLSVGLE--SWEDIVSDLEQALK 384 (386)
T ss_pred CCCcCccccCCCccccccCCHHHHHhcCCCCCeEEEEeccC--CHHHHHHHHHHHHh
Confidence 6643210 35799999874 46666666666664
No 175
>PRK08776 cystathionine gamma-synthase; Provisional
Probab=99.95 E-value=6.9e-25 Score=206.23 Aligned_cols=227 Identities=19% Similarity=0.221 Sum_probs=169.8
Q ss_pred CCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcc----hHHHHHhCC
Q 014936 70 FNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPI----YELSAAFRH 145 (415)
Q Consensus 70 ~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~----~~~~~~~~g 145 (415)
+.+|+++ ...+|++.+|++.+ .++. +++++|++++.+++.+++++||+|+++.|+|+. +...+...|
T Consensus 54 y~R~~~p-~~~~Le~~lA~l~g-------~~~~-v~~~sG~~Ai~~~l~all~pGD~Vvv~~p~Y~~t~~~~~~~~~~~g 124 (405)
T PRK08776 54 YTRSGNP-TRDLLGEALAELEG-------GAGG-VITATGMGAINLVLNALLQPGDTLVVPHDAYGGSWRLFNALAKKGH 124 (405)
T ss_pred ccCCCCh-HHHHHHHHHHHHhC-------CCce-EEEcCHHHHHHHHHHHHhCCCCEEEEccCCchHHHHHHHHHHHhcC
Confidence 4455553 45788888888762 2344 566666899999999999999999999999987 344455667
Q ss_pred CeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCc
Q 014936 146 IEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPF 225 (415)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~ 225 (415)
.++..++. .|++.+++.+++++++|++++|+||||.+ .++++|+++|+++|+++|+|++|.... ..
T Consensus 125 ~~v~~v~~-------~d~~~l~~~i~~~tklV~l~~P~NPtG~v---~dl~~I~~la~~~gi~vIvD~a~a~~~----~~ 190 (405)
T PRK08776 125 FALITADL-------TDPRSLADALAQSPKLVLIETPSNPLLRI---TDLRFVIEAAHKVGALTVVDNTFLSPA----LQ 190 (405)
T ss_pred cEEEEECC-------CCHHHHHHhcCcCCeEEEEECCCCCCCcc---CCHHHHHHHHHHcCCEEEEECCCcccc----cC
Confidence 77777653 37899999998889999999999999999 568899999999999999999997532 12
Q ss_pred ccccccCCCCCeEEEccCccccCCC-CceEEEEEeeCCCCCCChHHHHHHHHhhcc-ccCCchhHHHHHHHHhhCCCcHH
Q 014936 226 VPMGVFGSTVPILTLGSLSKRWIVP-GWRLGWFVTTDPCGMFRKPKVVERMKKYFD-ILGDPATFIQAAVPSILQQPDEV 303 (415)
Q Consensus 226 ~~~~~~~~~~~~i~~~s~sK~~~~~-G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~a~~~~l~~~~~~ 303 (415)
.++ .++.+ +++.|++|.++.+ ++..|++++++ +++.+++..... .....+++.+.++...++
T Consensus 191 ~pl-~~gaD---ivv~S~tK~l~g~~~~~~G~vv~~~-------~~l~~~l~~~~~~~g~~~s~~~a~l~~~gl~----- 254 (405)
T PRK08776 191 KPL-EFGAD---LVLHSTTKYINGHSDVVGGAVVARD-------AELHQQLVWWANALGLTGSPFDAFLTLRGLR----- 254 (405)
T ss_pred Ccc-cccCC---EEEecCceeecCCCCceEEEEEeCC-------HHHHHHHHHHHHhcCCCCCHHHHHHHHhhhC-----
Confidence 222 23333 8888999998765 57789888754 246666654432 234567777777766664
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCC
Q 014936 304 FFKKTLNLLKQSVDICYNKIKEIPCISCPHKP 335 (415)
Q Consensus 304 ~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p 335 (415)
+++.+.++..+++..+.+.|+..|.+..+.+|
T Consensus 255 tl~~r~~~~~~na~~la~~L~~~p~v~~V~yP 286 (405)
T PRK08776 255 TLDARLRVHQENADAIAALLDGHAAVNQVYYP 286 (405)
T ss_pred cHHHHHHHHHHHHHHHHHHHHcCCCeeEEECC
Confidence 47889999999999999999987765544444
No 176
>PRK00854 rocD ornithine--oxo-acid transaminase; Reviewed
Probab=99.95 E-value=3.6e-25 Score=210.49 Aligned_cols=333 Identities=13% Similarity=0.103 Sum_probs=222.6
Q ss_pred cCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCC-CCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHH
Q 014936 33 NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNG-YAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQ 111 (415)
Q Consensus 33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~-y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~ 111 (415)
+++.++|+..|.-.... --.+|.+.+++.++++...... +.......++.+.++++. ..+.++++++|++
T Consensus 39 ~g~~~lD~~~~~~~~~~-Gh~~~~i~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~--------~~~~~~~~~SGs~ 109 (401)
T PRK00854 39 DGNRYLDCLSAYSAVNQ-GHCHPKILAAMVEQAGRLTLTSRAFRNDQLAPLYEELAALT--------GSHKVLPMNSGAE 109 (401)
T ss_pred CCCEEEEcCcchhhccC-CCCCHHHHHHHHHHHhhccccccccCCHHHHHHHHHHHhhC--------CCCEEEEeCCcHH
Confidence 47788998777422111 1137899999999987543211 112233456677777664 2468999999999
Q ss_pred HHHHHHHHhcC---------CC-CEEEEcCCCCcchHHHHHhCCC-------------eEEEeeccCCCCCCCChhHHHh
Q 014936 112 AIDVAMALLSR---------PG-ANILLPRPGFPIYELSAAFRHI-------------EVRHFDLLPDKGWEVDLDDIES 168 (415)
Q Consensus 112 al~~~~~~l~~---------~g-d~vi~~~p~y~~~~~~~~~~g~-------------~~~~~~~~~~~~~~~~~~~l~~ 168 (415)
|+..+++++.. +| ++|++...+|++....+...+. ++..++. .|++.+++
T Consensus 110 A~e~al~~a~~~~~~~~g~~~~~~~vi~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~le~ 182 (401)
T PRK00854 110 AVETAIKAVRKWGYEVKGVPEGQAEIIVCADNFHGRTLSIVGFSTDPDARGGFGPFTPGFRVVPF-------GDAEALEA 182 (401)
T ss_pred HHHHHHHHHHHHHHhccCCCCCCceEEEECCCcCCccHHHHhccCCccccccCCCCCCCeEEeCC-------CCHHHHHH
Confidence 99999998842 23 6788888888775544433222 1222221 47899999
Q ss_pred hcCCCceEEEecCCCCccccCCC-HHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCcccc
Q 014936 169 LADQNTVALVIINPGNPCGNVYS-YQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRW 247 (415)
Q Consensus 169 ~~~~~~~~v~i~~p~nptG~~~~-~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~ 247 (415)
.+.+++++|++.+|+||+|.+++ .+.+++|.++|++||+++|+||+|.++.+.+.... ....+....++ + ++|.+
T Consensus 183 ~i~~~~~aii~e~~~~~~G~~~~~~~~l~~l~~l~~~~gi~lI~DEv~~g~g~~g~~~~-~~~~g~~~D~~-~--~~K~l 258 (401)
T PRK00854 183 AITPNTVAFLVEPIQGEAGVIIPPAGYFTRVRELCTANNVTLILDEIQTGLGRTGKLLA-EEHEGIEADVT-L--IGKAL 258 (401)
T ss_pred HhCCCeEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCchHhH-HhhcCCCCCEE-E--ecccc
Confidence 99888999999999999999987 45699999999999999999999987655443211 11112111223 2 47997
Q ss_pred CCCCceEEEEEeeCCCCCCChHHHHHHHHhh-ccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcC
Q 014936 248 IVPGWRLGWFVTTDPCGMFRKPKVVERMKKY-FDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEI 326 (415)
Q Consensus 248 ~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 326 (415)
+...+|+||+++++ ++.+.+... ...+.+.+++.+.++.+.|+... -+...++++++.+++.+.|+++
T Consensus 259 ~gg~~~ig~v~~~~--------~~~~~l~~~~~~~t~~~~~~~~aa~~a~L~~l~---~~~~~~~~~~~~~~l~~~L~~~ 327 (401)
T PRK00854 259 SGGFYPVSAVLSNS--------EVLGVLKPGQHGSTFGGNPLACAVARAALKVLT---EEGMIENAAEMGAYFLEGLRSI 327 (401)
T ss_pred cCCccCeEEEEEcH--------HHHhcccCCCCCCCCCcCHHHHHHHHHHHHHHH---HcCHHHHHHHHHHHHHHHHHhh
Confidence 65558999999975 566666543 22344578889999988886421 1235678888889999999876
Q ss_pred CCCcCCC-CCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEe--eCChhhHHHHHHHHHH
Q 014936 327 PCISCPH-KPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTF--AVDPYSLEECLDRIKS 403 (415)
Q Consensus 327 ~~~~~~~-~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~--~~~~~~l~~~l~~l~~ 403 (415)
. ...+. ....|.++.+.+.... .+..++...++ ++||.+.+.. .+++|+++ ..+++++++++++|++
T Consensus 328 ~-~~~~~~~~g~g~~~~i~~~~~~----~~~~~~~~~L~-~~GV~v~~~~----~~~lR~~p~~~~t~e~i~~~i~~l~~ 397 (401)
T PRK00854 328 R-SNIVREVRGRGLMLAVELEPEA----GGARQYCEALK-ERGLLAKDTH----DHTIRLAPPLVITREQVDWALEQIAK 397 (401)
T ss_pred c-cCceEEEeccceEEEEEEecCc----hhHHHHHHHHH-HCCeEEecCC----CCEEEEeCCcccCHHHHHHHHHHHHH
Confidence 2 22111 1233544444442210 13456777765 5699997532 47999997 4789999999999998
Q ss_pred HHH
Q 014936 404 FYQ 406 (415)
Q Consensus 404 ~~~ 406 (415)
++.
T Consensus 398 ~l~ 400 (401)
T PRK00854 398 VLA 400 (401)
T ss_pred Hhh
Confidence 763
No 177
>TIGR03812 tyr_de_CO2_Arch tyrosine decarboxylase MnfA. Members of this protein family are the archaeal form, MnfA, of tyrosine decarboxylase, and are involved in methanofuran biosynthesis. Members show clear homology to the Enterococcus form, Tdc, that is involved in tyrosine decarboxylation for resistance to acidic conditions.
Probab=99.95 E-value=8.1e-25 Score=206.50 Aligned_cols=314 Identities=17% Similarity=0.160 Sum_probs=215.0
Q ss_pred cHHHHHHHHHHHhcC--CCCCCCC-CCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhc------CCC
Q 014936 54 THVATEAVAEALLSE--KFNGYAP-TAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLS------RPG 124 (415)
Q Consensus 54 ~~~~~~a~~~~~~~~--~~~~y~~-~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~------~~g 124 (415)
.+.+.+++...+... ....|+. ..-..++++.+|+++ +++++++++++|+++++..++.++. ++|
T Consensus 33 ~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~------g~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g 106 (373)
T TIGR03812 33 HPIAVKAYDMFIETNLGDPGLFPGTKKIEEEVVGSLGNLL------HLPDAYGYIVSGGTEANIQAVRAAKNLAREEKRT 106 (373)
T ss_pred hHHHHHHHHHHhhcCCCCcccCccHHHHHHHHHHHHHHHh------CCCCCCeEEeccHHHHHHHHHHHHHHHHhccCCC
Confidence 466677777765432 1112321 111245666666665 3566788999999999988877654 467
Q ss_pred CEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhh
Q 014936 125 ANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANK 204 (415)
Q Consensus 125 d~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~ 204 (415)
|+|++++++|.++...++..|++++.++++ .++.+|++++++.+++++..++++.|+||||.+. ++++|+++|++
T Consensus 107 ~~vl~~~~~h~~~~~~~~~~G~~~~~v~~~--~~~~~d~~~l~~~l~~~~~~vv~~~~~~~tG~~~---~~~~i~~l~~~ 181 (373)
T TIGR03812 107 PNIIVPESAHFSFEKAAEMLGLELRYAPLD--EDYTVDVKDVEDLIDDNTIGIVGIAGTTELGQID---DIEELSKIALE 181 (373)
T ss_pred cEEEECCcchHHHHHHHHHcCCeEEEEeeC--CCCCcCHHHHHHHHhhCcEEEEEECCCCCCCccC---CHHHHHHHHHH
Confidence 999999999999999999999999999875 3466899999999987776666666899999994 57788888889
Q ss_pred cCcEEEEccccCCcccC--C--CC--cccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhh
Q 014936 205 LKTLVIADEVYGHLVFG--D--KP--FVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKY 278 (415)
Q Consensus 205 ~~~~li~De~~~~~~~~--~--~~--~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~ 278 (415)
+|+++|+|++|+.+... . .. ...+.....+ .+..|.+| |+.++.+.|+++..++ ++.+.++..
T Consensus 182 ~~~~livD~a~~~~~~~~~~~~~~~~~~d~~~~~~d---~~~~s~~K-~~~~~~~~G~~~~~~~-------~~~~~l~~~ 250 (373)
T TIGR03812 182 NGIYLHVDAAFGGFVIPFLKKGYNPPPFDFSLPGVQ---SITIDPHK-MGLSPIPAGGILFRSK-------SYLKYLSVD 250 (373)
T ss_pred cCCeEEEEcCchhHHHHHHhcCCCCCCccccCCCCC---EEEECccc-cCCCcCCceEEEEeCH-------HHHhhhccc
Confidence 99999999999865421 0 00 1111111111 34457789 4777788887776442 355544321
Q ss_pred ccc---------cCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCccc
Q 014936 279 FDI---------LGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSL 349 (415)
Q Consensus 279 ~~~---------~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~ 349 (415)
... .++.+.....++..+|+...+..+++..+++.++++++.+.|+++ ++..+ .+....++.+.++
T Consensus 251 ~~~~~~~~~~~~~gt~~~~~~~~~~~~l~~l~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~~~~~v~~~~~--- 325 (373)
T TIGR03812 251 APYLTVKKQATITGTRSGASAAATYAVIKYLGREGYRKIVAECMENTRYLVEELKKI-GFEPV-IEPVLNIVAFEVD--- 325 (373)
T ss_pred CcccCCCCCcceEeechhHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEE-cCCCceEEEEEeC---
Confidence 110 023344556666666765445778888999999999999999988 45423 2334556666654
Q ss_pred cCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEee--CChhhHHHHHHHHHH
Q 014936 350 LDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFA--VDPYSLEECLDRIKS 403 (415)
Q Consensus 350 ~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~--~~~~~l~~~l~~l~~ 403 (415)
+..++...| .++||.+.++. .++++|++++ +++++++.+++.|++
T Consensus 326 -----~~~~v~~~L-~~~gi~v~~~~---~~~~iRis~~~~~t~edid~l~~~L~~ 372 (373)
T TIGR03812 326 -----DPEEVRKKL-RDRGWYVSVTR---CPKALRIVVMPHVTREHIEEFLEDLKE 372 (373)
T ss_pred -----CHHHHHHHH-HHCCceeccCC---CCCEEEEEEECCCCHHHHHHHHHHHhh
Confidence 234555555 56699987653 3579999995 689999999999875
No 178
>PRK14012 cysteine desulfurase; Provisional
Probab=99.95 E-value=7.4e-25 Score=208.35 Aligned_cols=334 Identities=13% Similarity=0.135 Sum_probs=219.0
Q ss_pred eEecccCCCCCCCCCCcHHHHHHHHHHHh--cCCCCCCC--------CCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeC
Q 014936 38 ISLAMGDPTVHSCFHTTHVATEAVAEALL--SEKFNGYA--------PTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTS 107 (415)
Q Consensus 38 i~l~~g~~~~~~~~~~~~~~~~a~~~~~~--~~~~~~y~--------~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~ 107 (415)
+.|+.+.. .++++.+.+++.+.+. ........ ......++|+.+++++ +.+++++++++
T Consensus 5 iyld~a~~-----~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ia~~~------g~~~~~v~~~~ 73 (404)
T PRK14012 5 IYLDYSAT-----TPVDPRVAEKMMPYLTMDGTFGNPASRSHRFGWQAEEAVDIARNQIADLI------GADPREIVFTS 73 (404)
T ss_pred EEecCcCC-----CCCCHHHHHHHHHHHHhcccCcCCCchhhHHHHHHHHHHHHHHHHHHHHc------CcCcCeEEEeC
Confidence 55666653 3567889999988775 21111110 0123556788888887 45778899999
Q ss_pred ChHHHHHHHHHHhc----CCCCEEEEcCCCCcchHHHH---HhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEec
Q 014936 108 GCTQAIDVAMALLS----RPGANILLPRPGFPIYELSA---AFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVII 180 (415)
Q Consensus 108 g~~~al~~~~~~l~----~~gd~vi~~~p~y~~~~~~~---~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~ 180 (415)
|+|+++++++.++. ++||+|+++.++|++..... +..|++++.++.++ ++.+|++++++++++++++++++
T Consensus 74 g~t~al~~~l~~l~~~~~~~gd~Vi~~~~~~~s~~~~~~~~~~~g~~~~~v~~~~--~g~~d~~~l~~~i~~~t~lv~~~ 151 (404)
T PRK14012 74 GATESDNLAIKGAAHFYQKKGKHIITSKTEHKAVLDTCRQLEREGFEVTYLDPQS--NGIIDLEKLEAAMRDDTILVSIM 151 (404)
T ss_pred CHHHHHHHHHHHHHHhhcCCCCEEEEecCccHHHHHHHHHHHhCCCEEEEEccCC--CCcCCHHHHHHhcCCCCEEEEEE
Confidence 99999999887764 78999999999998765543 34699999888753 45689999999999999999999
Q ss_pred CCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEee
Q 014936 181 NPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTT 260 (415)
Q Consensus 181 ~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~ 260 (415)
+++||||.+.+ +++|.++|+++|+++|+|++++... ....+...+.+ +++.|++|.++.. ++|+++++
T Consensus 152 ~~~n~tG~~~~---~~~I~~la~~~g~~vivD~a~~~g~----~~~~~~~~~~D---~~~~s~~K~~gp~--g~G~l~~~ 219 (404)
T PRK14012 152 HVNNEIGVIQD---IAAIGEICRERGIIFHVDAAQSVGK----VPIDLSKLKVD---LMSFSAHKIYGPK--GIGALYVR 219 (404)
T ss_pred CcCCCccchhh---HHHHHHHHHHcCCEEEEEcchhcCC----cccCcccCCCC---EEEEehhhccCCC--ceEEEEEe
Confidence 99999999954 7888889999999999999998633 22223333333 6777999976433 58999887
Q ss_pred CCCCCCChHHHHHHHHhhccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCC-C---C
Q 014936 261 DPCGMFRKPKVVERMKKYFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHK-P---E 336 (415)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~-p---~ 336 (415)
+.......+.+...-.......++.+.....++.++++.. ....+...++.++.++++.+.|++++++..... + .
T Consensus 220 ~~~~~~~~~~~~g~~~~~~~~~gt~~~~~~~~l~~al~~~-~~~~~~~~~~~~~l~~~l~~~L~~~~~i~~~~~~~~~~~ 298 (404)
T PRK14012 220 RKPRVRLEAQMHGGGHERGMRSGTLPTHQIVGMGEAARIA-KEEMATENERIRALRDRLWNGIKDIEEVYLNGDLEQRVP 298 (404)
T ss_pred cCCCCCCCceecCCCccCCccCCCcCHHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCccccCC
Confidence 6431110000000000000111233333333443444321 234556678888899999999988776652211 1 1
Q ss_pred CceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCC-------------------CCeEEEEee--CChhhHH
Q 014936 337 GSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGL-------------------KNWLRVTFA--VDPYSLE 395 (415)
Q Consensus 337 ~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~-------------------~~~iRi~~~--~~~~~l~ 395 (415)
...++++.+. +..++...+ .++.+..|..|.. .+.||+++. ++++|++
T Consensus 299 ~~~~~~~~~~--------~~~~~~~~l---~~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~iRls~~~~~t~~dvd 367 (404)
T PRK14012 299 GNLNVSFNYV--------EGESLIMAL---KDLAVSSGSACTSASLEPSYVLRALGLNDELAHSSIRFSLGRFTTEEEID 367 (404)
T ss_pred CEEEEEEeCc--------CHHHHHHhC---CCeEEEchhhhCCCCCCCCHHHHHcCCChhhcCceEEEEecCCCCHHHHH
Confidence 1223454432 223444433 3777777755522 368999994 6899999
Q ss_pred HHHHHHHHHHHHH
Q 014936 396 ECLDRIKSFYQRH 408 (415)
Q Consensus 396 ~~l~~l~~~~~~~ 408 (415)
.+++.|+++++.+
T Consensus 368 ~~~~~l~~~~~~~ 380 (404)
T PRK14012 368 YAIELVRKSIGKL 380 (404)
T ss_pred HHHHHHHHHHHHH
Confidence 9999999988765
No 179
>PRK08088 4-aminobutyrate aminotransferase; Validated
Probab=99.95 E-value=2.3e-25 Score=212.33 Aligned_cols=353 Identities=14% Similarity=0.129 Sum_probs=227.0
Q ss_pred ccCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHH
Q 014936 32 KNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQ 111 (415)
Q Consensus 32 ~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~ 111 (415)
.+++.++||..|......+ -.+|.+.+++.+++....+ .+....+.+ ...++|+++....+.+. .++++++++|++
T Consensus 38 ~dG~~~lD~~~g~~~~~lG-h~~~~i~~a~~~~~~~~~~-~~~~~~~~~-~~~~la~~l~~~~~~~~-~~~~~f~~sGse 113 (425)
T PRK08088 38 VEGREYLDFAGGIAVLNTG-HLHPKVVAAVEAQLKKLSH-TCFQVLAYE-PYLELCEKMNQKVPGDF-AKKTLLVTTGSE 113 (425)
T ss_pred CCCCEEEEcCCchhhcCCC-CCCHHHHHHHHHHHhhCCC-ccccccCCH-HHHHHHHHHHHhCCCCC-CCEEEEeCCcHH
Confidence 3478899998886443221 2478899999999876432 222222233 34477777766444222 147788888888
Q ss_pred HHHHHHHHhc--CCCCEEEEcCCCCcchHHHHHhCCCeEEE----------------eeccCCCCCCC--ChhHHHhhcC
Q 014936 112 AIDVAMALLS--RPGANILLPRPGFPIYELSAAFRHIEVRH----------------FDLLPDKGWEV--DLDDIESLAD 171 (415)
Q Consensus 112 al~~~~~~l~--~~gd~vi~~~p~y~~~~~~~~~~g~~~~~----------------~~~~~~~~~~~--~~~~l~~~~~ 171 (415)
|++.+++... .....|+..+++|++....+...+..... ++.+. ++... +++.+++.++
T Consensus 114 a~e~Alklar~~~~r~~iv~~~~~yHG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~-~~~~~~~~~~~l~~~l~ 192 (425)
T PRK08088 114 AVENAVKIARAATKRSGVIAFTGAYHGRTHYTLALTGKVNPYSAGMGLMPGHVYRALYPCPL-HGVSEDDAIASIERIFK 192 (425)
T ss_pred HHHHHHHHHHHHhCCCeEEEECCccCCccHHHHHhhCCCCccccCCCCCCCCcEEcCCCccc-cCccHHHHHHHHHHHHH
Confidence 8887777653 12346777799999887666554332110 11100 11001 1455777764
Q ss_pred ----CCceEEEecCC--CCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCcc
Q 014936 172 ----QNTVALVIINP--GNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSK 245 (415)
Q Consensus 172 ----~~~~~v~i~~p--~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK 245 (415)
....+.++..| ++++....+.+.+++|.++|+++|+++|+||+|.++.+.+.. ..+...+ .++.+.||||
T Consensus 193 ~~~~~~~~aavi~Epi~~~~G~~~~~~~~~~~l~~l~~~~~~~lI~Dev~~g~g~~g~~-~~~~~~~---~~pdi~s~sK 268 (425)
T PRK08088 193 NDAAPEDIAAIIIEPVQGEGGFYAASPAFMQRLRALCDEHGIMLIADEVQTGAGRTGTL-FAMEQMG---VAADLTTFAK 268 (425)
T ss_pred hccCCCceEEEEECcccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCcch-hHHhhcC---CCCCEEEEec
Confidence 23455677777 567677889999999999999999999999999986655432 1221222 2345789999
Q ss_pred ccCCCCceEEEEEeeCCCCCCChHHHHHHHHhhc-cccCCchhHHHHHHHHhhCCCc-HHHHHHHHHHHHHHHHHHHHHh
Q 014936 246 RWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYF-DILGDPATFIQAAVPSILQQPD-EVFFKKTLNLLKQSVDICYNKI 323 (415)
Q Consensus 246 ~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~a~~~~l~~~~-~~~~~~~~~~~~~~~~~l~~~l 323 (415)
.++ +|+|+||+++++ ++++.+.... ..+...+++.|.++..+|+... ++++++.++..+++++.+.+..
T Consensus 269 ~l~-~G~rig~v~~~~--------~~~~~~~~~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~l~ 339 (425)
T PRK08088 269 SIA-GGFPLAGVTGRA--------EVMDAIAPGGLGGTYAGNPIACAAALAVLKVFEQENLLQKANALGEKLKDGLLAIA 339 (425)
T ss_pred ccc-CCCcceeeEecH--------HHHhhcCCCCCCCCCCcCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHH
Confidence 975 899999999975 6777775542 3456788999999999997643 2445555555555555555544
Q ss_pred hcCCCCcCCCCCCCceEEEEecCcccc---CCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEee--CChhhHHHHH
Q 014936 324 KEIPCISCPHKPEGSMAVMLKLNLSLL---DDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFA--VDPYSLEECL 398 (415)
Q Consensus 324 ~~~~~~~~~~~p~~g~~~~~~l~~~~~---~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~--~~~~~l~~~l 398 (415)
.+.|.+..+ ...|+++|+.+..... ++......+...+ .++||.+.|+..+ .+.||++++ .+++++++++
T Consensus 340 ~~~~~~~~v--~g~G~~~~l~l~~~~~~~~p~~~~~~~l~~~~-~~~Gv~~~~~~~~--~~~iRl~~~~~~t~~ei~~~i 414 (425)
T PRK08088 340 EKHPEIGDV--RGLGAMIAIELFEDGDHSKPNAKLTAQIVARA-RDKGLILLSCGPY--YNVLRILVPLTIEDAQIRQGL 414 (425)
T ss_pred HhCCCeEEE--eccceEEEEEEecCCCCCCCCHHHHHHHHHHH-HhCCCEEecCCCC--CCEEEEECCCCcCHHHHHHHH
Confidence 456544322 2238899999843211 0111234555554 5679998876544 378999996 5799999999
Q ss_pred HHHHHHHHH
Q 014936 399 DRIKSFYQR 407 (415)
Q Consensus 399 ~~l~~~~~~ 407 (415)
++|.+++.+
T Consensus 415 ~~l~~~l~~ 423 (425)
T PRK08088 415 EIIAQCFDE 423 (425)
T ss_pred HHHHHHHHh
Confidence 999998864
No 180
>PLN02955 8-amino-7-oxononanoate synthase
Probab=99.95 E-value=9e-25 Score=204.24 Aligned_cols=326 Identities=16% Similarity=0.107 Sum_probs=227.1
Q ss_pred CcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCC------CCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeC
Q 014936 34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKF------NGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTS 107 (415)
Q Consensus 34 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~------~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~ 107 (415)
++++++|++++ +.++..+|+++++..+.++.... .-++...-+.+|+++||+|+ ..+..++.+
T Consensus 101 ~r~~l~FsSnd---YLGL~~~p~v~~a~~~ai~~yG~g~~gSrl~~G~~~~h~~LE~~LA~f~--------g~e~all~s 169 (476)
T PLN02955 101 FKKLLLFSGND---YLGLSSHPTISNAAANAAKEYGMGPKGSALICGYTTYHRLLESSLADLK--------KKEDCLVCP 169 (476)
T ss_pred CceEEEeeccC---ccCCCCCHHHHHHHHHHHHHcCCCCCCcCccccChHHHHHHHHHHHHHH--------CCCcEEEEC
Confidence 45889999999 67788999999999998874211 11222223478999999998 567888888
Q ss_pred ChHHHHHHHHHHh--------------cCCCCEEEEcCCCCcchHHHHHhC----CCeEEEeeccCCCCCCCChhHHHhh
Q 014936 108 GCTQAIDVAMALL--------------SRPGANILLPRPGFPIYELSAAFR----HIEVRHFDLLPDKGWEVDLDDIESL 169 (415)
Q Consensus 108 g~~~al~~~~~~l--------------~~~gd~vi~~~p~y~~~~~~~~~~----g~~~~~~~~~~~~~~~~~~~~l~~~ 169 (415)
+|..|+..++.++ .+++|.|+.+..+|.++...++.. ++++..+++ .|+++|++.
T Consensus 170 SGy~AN~~~i~aL~~~~~~~~~~~~~~~~~~d~i~~D~~~HaSI~dG~~ls~~~~~a~~~~f~H-------ND~~~Le~~ 242 (476)
T PLN02955 170 TGFAANMAAMVAIGSVASLLAASGKPLKNEKVAIFSDALNHASIIDGVRLAERQGNVEVFVYRH-------CDMYHLNSL 242 (476)
T ss_pred ChHHHHHHHHHHHhhccccccccccccCCCCcEEEEeccchHHHHHHHHhccccCCceEEEeCC-------CCHHHHHHH
Confidence 8888888888887 256788999999999999998876 577777765 378888877
Q ss_pred cCC--CceEEEecCC-CCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCC-CCCeEEEccCcc
Q 014936 170 ADQ--NTVALVIINP-GNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS-TVPILTLGSLSK 245 (415)
Q Consensus 170 ~~~--~~~~v~i~~p-~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK 245 (415)
++. ....++++.+ .++.|.+.| +++|.++|++||+++|+||+|+.+.++..+......++. .+..|+++||||
T Consensus 243 L~~~~~~~~~Vv~EgV~SmdGdiap---L~eL~~L~~~~ga~LiVDEAH~~Gv~G~~G~G~~e~~g~~~di~ii~~TLsK 319 (476)
T PLN02955 243 LSSCKMKRKVVVTDSLFSMDGDFAP---MEELSQLRKKYGFLLVIDDAHGTFVCGENGGGVAEEFNCEADVDLCVGTLSK 319 (476)
T ss_pred HHhCCCCceEEEEeCCCCCCCCcCC---HHHHHHHHHHcCcEEEEcccccCceecCCCCcHHHHhCCCCCCcEEEEeCcc
Confidence 743 1234555665 789999966 777777778999999999999998877544433333322 345689999999
Q ss_pred ccCCCCceEEEEEeeCCCCCCChHHHHHHHHhhcc--ccCCc-hhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHH
Q 014936 246 RWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFD--ILGDP-ATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNK 322 (415)
Q Consensus 246 ~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~ 322 (415)
++|+.| |++++++ ++++.++.... .+++. ++....++.+.++.... -..++++++++.+++.+.
T Consensus 320 A~G~~G---Gfi~gs~--------~~~~~l~~~~~~~ifStalpp~~aaa~laal~l~~~--~~~~r~~L~~n~~~fr~~ 386 (476)
T PLN02955 320 AAGCHG---GFIACSK--------KWKQLIQSRGRSFIFSTAIPVPMAAAAYAAVVVARK--EKWRRKAIWERVKEFKAL 386 (476)
T ss_pred chhccC---ceeecHH--------HHHHHHHHhCCCCeecccccHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHh
Confidence 987777 9998865 56777765421 22233 33344444444433211 124667888888888874
Q ss_pred hhcCCCCcCCCCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCC---CeEEEEe--eCChhhHHHH
Q 014936 323 IKEIPCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLK---NWLRVTF--AVDPYSLEEC 397 (415)
Q Consensus 323 l~~~~~~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~---~~iRi~~--~~~~~~l~~~ 397 (415)
. ++. . .+.++.+.+... ....++.++| .+.||.+.+..++..+ ..+||++ .++++||+.+
T Consensus 387 ---~-G~~-~----~sPI~pI~ig~~-----~~a~~~~~~L-~~~Gi~v~~i~yPtVP~g~~rLRi~lsA~Ht~edId~l 451 (476)
T PLN02955 387 ---S-GVD-I----SSPIISLVVGNQ-----EKALKASRYL-LKSGFHVMAIRPPTVPPNSCRLRVTLSAAHTTEDVKKL 451 (476)
T ss_pred ---c-CCC-C----CCCEEEEEeCCH-----HHHHHHHHHH-HHCCCEEEEECCCCCCCCCceEEEeeCCCCCHHHHHHH
Confidence 2 554 2 244444445421 1234555555 5679999987776653 4699999 4789999999
Q ss_pred HHHHHHHHHHH
Q 014936 398 LDRIKSFYQRH 408 (415)
Q Consensus 398 l~~l~~~~~~~ 408 (415)
++.|.++....
T Consensus 452 v~~L~~~~~~~ 462 (476)
T PLN02955 452 ITALSSCLDFD 462 (476)
T ss_pred HHHHHHHHhhh
Confidence 99998876643
No 181
>PRK08045 cystathionine gamma-synthase; Provisional
Probab=99.95 E-value=1.2e-24 Score=203.42 Aligned_cols=228 Identities=16% Similarity=0.207 Sum_probs=175.5
Q ss_pred CCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHH----HhC
Q 014936 69 KFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSA----AFR 144 (415)
Q Consensus 69 ~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~----~~~ 144 (415)
.+.+|+++ ....|++.+|++.+ .+.+++++|+++++..++.+++++||+|+++.|+|+.....+ ...
T Consensus 45 ~Y~R~~~p-t~~~L~~~lA~l~g--------~~~~i~~~sg~~Ai~~~l~~l~~~GD~Vl~~~~~y~~~~~~~~~~~~~~ 115 (386)
T PRK08045 45 DYSRRGNP-TRDVVQRALAELEG--------GAGAVLTNTGMSAIHLVTTVFLKPGDLLVAPHDCYGGSYRLFDSLAKRG 115 (386)
T ss_pred eeeCCCCc-cHHHHHHHHHHHhC--------CCeEEEECCHHHHHHHHHHHHcCCCCEEEEcCCCcHHHHHHHHHHHhhC
Confidence 35567764 56899999999972 347999999999999999999999999999999998644333 223
Q ss_pred CCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCC
Q 014936 145 HIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKP 224 (415)
Q Consensus 145 g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~ 224 (415)
|.++..++ ..|++.+++++++++++|++++|+||||.+++ +++|.++|+++|+++|+|++|.....
T Consensus 116 gi~v~~vd-------~~d~e~l~~~l~~~tklV~l~sP~NPtG~v~d---i~~I~~ia~~~g~~vivDeay~~~~~---- 181 (386)
T PRK08045 116 CYRVLFVD-------QGDEQALRAALAEKPKLVLVESPSNPLLRVVD---IAKICHLAREAGAVSVVDNTFLSPAL---- 181 (386)
T ss_pred CeEEEEeC-------CCCHHHHHHhcccCCeEEEEECCCCCCCEecC---HHHHHHHHHHcCCEEEEECCCCcccc----
Confidence 44555543 15889999999889999999999999999976 56777778899999999999986432
Q ss_pred cccccccCCCCCeEEEccCccccC-CCCceEEEEEeeCCCCCCChHHHHHHHHhh-ccccCCchhHHHHHHHHhhCCCcH
Q 014936 225 FVPMGVFGSTVPILTLGSLSKRWI-VPGWRLGWFVTTDPCGMFRKPKVVERMKKY-FDILGDPATFIQAAVPSILQQPDE 302 (415)
Q Consensus 225 ~~~~~~~~~~~~~i~~~s~sK~~~-~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~a~~~~l~~~~~ 302 (415)
..++ .++.+ ++++|++|.++ .++.+.|++++++ +++.+.+... ...+.+.++..+..+...|+.
T Consensus 182 ~~pl-~~gaD---ivv~S~tK~l~G~~d~~~G~vi~~~-------~~~~~~l~~~~~~~g~~~~p~~~~l~~rgl~t--- 247 (386)
T PRK08045 182 QNPL-ALGAD---LVLHSCTKYLNGHSDVVAGVVIAKD-------PDVVTELAWWANNIGVTGGAFDSYLLLRGLRT--- 247 (386)
T ss_pred CCch-hhCCC---EEEeecceeccCCCCceeEEEEeCc-------HHHHHHHHHHHHhcCCCCCHHHHHHHHhhhcc---
Confidence 1222 22332 88999999975 4568899988754 2466666544 334566788888888888875
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCC
Q 014936 303 VFFKKTLNLLKQSVDICYNKIKEIPCISCPHKP 335 (415)
Q Consensus 303 ~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p 335 (415)
+..++++..+++..+.+.|+..|.+..+.+|
T Consensus 248 --l~~R~~~~~~na~~la~~L~~~p~v~~V~yp 278 (386)
T PRK08045 248 --LVPRMELAQRNAQAIVKYLQTQPLVKKLYHP 278 (386)
T ss_pred --HHHHHHHHHHHHHHHHHHHHcCCCEeEEECC
Confidence 8888999999999999999988766544444
No 182
>PRK08133 O-succinylhomoserine sulfhydrylase; Validated
Probab=99.95 E-value=1.1e-24 Score=204.73 Aligned_cols=221 Identities=18% Similarity=0.174 Sum_probs=165.1
Q ss_pred CCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHH----HHHhCCCeEEEee
Q 014936 77 AGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYEL----SAAFRHIEVRHFD 152 (415)
Q Consensus 77 ~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~----~~~~~g~~~~~~~ 152 (415)
+...++++.+|+++ ..+++++++|+++|+..++.+++++||+|+++.+.|.+... .+...|+++..++
T Consensus 61 p~~~~le~~la~l~--------g~~~~v~~ssG~~Ai~~al~al~~~Gd~Vi~~~~~y~~t~~~~~~~~~~~G~~v~~vd 132 (390)
T PRK08133 61 PTVTMFQERLAALE--------GAEACVATASGMAAILAVVMALLQAGDHVVSSRSLFGSTVSLFEKIFARFGIETTFVD 132 (390)
T ss_pred hHHHHHHHHHHHHh--------CCCcEEEECCHHHHHHHHHHHHhCCCCEEEEccCcchhHHHHHHHHHHHcCcEEEEEC
Confidence 34678999999987 34578999999999999999999999999999999986544 4567899998886
Q ss_pred ccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccC
Q 014936 153 LLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFG 232 (415)
Q Consensus 153 ~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~ 232 (415)
. .|++++++++++++++|++.+|+||+|.+.+ +++|+++|+++|+++|+|++|+..... .++ .++
T Consensus 133 ~-------~d~~~l~~~i~~~tklV~ie~p~NptG~v~d---l~~I~~la~~~gi~livD~t~~~~~~~----~pl-~~g 197 (390)
T PRK08133 133 L-------TDLDAWRAAVRPNTKLFFLETPSNPLTELAD---IAALAEIAHAAGALLVVDNCFCTPALQ----QPL-KLG 197 (390)
T ss_pred C-------CCHHHHHHhcCcCCeEEEEECCCCCCCCcCC---HHHHHHHHHHcCCEEEEECCCcccccC----Cch-hhC
Confidence 5 2789999999999999999999999999964 788888899999999999998754321 122 122
Q ss_pred CCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhh-ccccCCchhHHHHHHHHhhCCCcHHHHHHHHHH
Q 014936 233 STVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKY-FDILGDPATFIQAAVPSILQQPDEVFFKKTLNL 311 (415)
Q Consensus 233 ~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~ 311 (415)
. .+++.|+||.++.+|.++|++++.+. ++++.+... .......++..+..+...++ .+..+.++
T Consensus 198 ~---Divv~S~sK~~~g~g~~~GG~vv~~~-------~~~~~~~~~~~~~g~~~~~~~a~~~l~gl~-----tl~~R~~~ 262 (390)
T PRK08133 198 A---DVVIHSATKYLDGQGRVLGGAVVGSK-------ELMEEVFGFLRTAGPTLSPFNAWVFLKGLE-----TLSLRMEA 262 (390)
T ss_pred C---cEEEeecceeecCCcceEeEEEEcCH-------HHHHHHHHHHHHhCCCCCHHHHHHHHcccc-----hHHHHHHH
Confidence 2 27889999999999999855544331 455555443 22233445555444433332 46777778
Q ss_pred HHHHHHHHHHHhhcCCCCcCCCCC
Q 014936 312 LKQSVDICYNKIKEIPCISCPHKP 335 (415)
Q Consensus 312 ~~~~~~~l~~~l~~~~~~~~~~~p 335 (415)
..+++..+.+.|++.|++..+.+|
T Consensus 263 ~~~~a~~la~~L~~~p~v~~v~yp 286 (390)
T PRK08133 263 HSANALALAEWLEAHPGVERVFYP 286 (390)
T ss_pred HHHHHHHHHHHHHhCCCeeEEECC
Confidence 888999999999988776544444
No 183
>PRK08249 cystathionine gamma-synthase; Provisional
Probab=99.95 E-value=8.9e-25 Score=205.26 Aligned_cols=225 Identities=15% Similarity=0.157 Sum_probs=169.4
Q ss_pred CCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHH----HHHhCCCe
Q 014936 72 GYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYEL----SAAFRHIE 147 (415)
Q Consensus 72 ~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~----~~~~~g~~ 147 (415)
+|+. +...++++.+|++. ..+..+++++|++++..++.+++++||+|+++.|+|.+... .+...|++
T Consensus 60 r~~~-p~~~~le~~lA~l~--------g~~~~i~~ssG~~Ai~~~l~all~~GD~Vi~~~~~y~~~~~~~~~~~~~~Gi~ 130 (398)
T PRK08249 60 RNTN-PTVQAFEEKVRILE--------GAEAATAFSTGMAAISNTLYTFLKPGDRVVSIKDTYGGTNKIFTEFLPRMGVD 130 (398)
T ss_pred CCCC-hHHHHHHHHHHHHh--------CCCeEEEeCChHHHHHHHHHHhcCCCCEEEEcCCchHHHHHHHHHHHhhCCeE
Confidence 4444 45689999999998 24567788888999999999999999999999999987543 34567888
Q ss_pred EEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCccc
Q 014936 148 VRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVP 227 (415)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~ 227 (415)
+..++. .|++.+++++++++++|++++|+||||.+++ +++|+++|+++|+++|+|++|+..... .+
T Consensus 131 v~~vd~-------~d~e~l~~~i~~~tklV~ie~p~NPtg~v~d---l~~I~~la~~~gi~livD~t~a~~~~~----~~ 196 (398)
T PRK08249 131 VTLCET-------GDHEQIEAEIAKGCDLLYLETPTNPTLKIVD---IERLAAAAKKVGALVVVDNTFATPINQ----NP 196 (398)
T ss_pred EEEcCC-------CCHHHHHHhcCCCCeEEEEECCCCCCCccCC---HHHHHHHHHHcCCEEEEECCcCccccC----Cc
Confidence 776643 5899999999989999999999999999976 667888889999999999999864422 12
Q ss_pred ccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhhcc-ccCCchhHHHHHHHHhhCCCcHHHHH
Q 014936 228 MGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFD-ILGDPATFIQAAVPSILQQPDEVFFK 306 (415)
Q Consensus 228 ~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~ 306 (415)
+ ..+.+ +++.|+||.++.+|.++|++++.+ +++++.++.... .....++..+..+...++. +.
T Consensus 197 l-~~~~D---ivv~S~sK~l~g~~~~~gG~vv~~-------~~l~~~l~~~~~~~g~~~s~~~a~l~l~~l~t-----L~ 260 (398)
T PRK08249 197 L-ALGAD---LVIHSATKFLSGHADALGGVVCGS-------KELMEQVYHYREINGATMDPMSAYLILRGMKT-----LK 260 (398)
T ss_pred h-hhCCC---EEeccCceecCCCCCceEEEEECC-------HHHHHHHHHHHHhcCCCCCHHHHHHHHhCcch-----HH
Confidence 2 12222 778999999888887765544432 257777765543 3345677777766666654 67
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCCcCCCCC
Q 014936 307 KTLNLLKQSVDICYNKIKEIPCISCPHKP 335 (415)
Q Consensus 307 ~~~~~~~~~~~~l~~~l~~~~~~~~~~~p 335 (415)
.+.++..+++..+.+.|+..|.+..+.+|
T Consensus 261 ~R~~~~~~na~~la~~L~~~p~v~~V~yP 289 (398)
T PRK08249 261 LRVRQQQESAMALAKYLQTHPKVEAVYYP 289 (398)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCeeEEECC
Confidence 77788889999999999987665544444
No 184
>PRK00011 glyA serine hydroxymethyltransferase; Reviewed
Probab=99.95 E-value=9.1e-25 Score=208.76 Aligned_cols=335 Identities=14% Similarity=0.100 Sum_probs=215.4
Q ss_pred CcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCC-----CCCC-CCCCcHHHHH----HHHHHHhhhCCCCCCCCcE
Q 014936 34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKF-----NGYA-PTAGLPLTRR----AIAEYLSRDLPYKLTPNDV 103 (415)
Q Consensus 34 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~-----~~y~-~~~g~~~lr~----~ia~~~~~~~~~~~~~~~i 103 (415)
.+..++|..++ .++++.+++++.+.+..... ..|. .......+++ .+++++ | ++...|
T Consensus 24 ~~~~~~l~~~~------n~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~~~----g--~~~~~i 91 (416)
T PRK00011 24 QEEHIELIASE------NFVSPAVMEAQGSVLTNKYAEGYPGKRYYGGCEYVDVVEQLAIDRAKELF----G--AEYANV 91 (416)
T ss_pred HhcCeeeeccc------CcCCHHHHHHHhchhhcccccCCCCccccccchHHHHHHHHHHHHHHHHh----C--CCceee
Confidence 46779999987 34678999998776432110 0111 1111223333 455554 3 345556
Q ss_pred EEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHH-----HHHhCCCeEEEeeccCCCCCCCChhHHHhhcCC-CceEE
Q 014936 104 FVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYEL-----SAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ-NTVAL 177 (415)
Q Consensus 104 ~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~-----~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~v 177 (415)
++++ |++++..++.++.++||+|+++.|+|.++.. .+...|++++.+++++ +++.+|++++++++++ +++++
T Consensus 92 ~~~s-gt~al~~~l~~l~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~d~~~l~~~i~~~~~k~v 169 (416)
T PRK00011 92 QPHS-GSQANAAVYFALLKPGDTILGMDLAHGGHLTHGSPVNFSGKLYNVVSYGVDE-ETGLIDYDEVEKLALEHKPKLI 169 (416)
T ss_pred ecCC-chHHHHHHHHHhcCCCCEEEEeccccCCccccccccccccceeeEeecCcCc-ccCCcCHHHHHHHHHhcCCCEE
Confidence 5555 5779999999999999999999999976432 1233456777777643 2467999999999864 68888
Q ss_pred EecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcc-cCCCCcccccccCCCCCeEEEccCccccCCCCceEEE
Q 014936 178 VIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLV-FGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGW 256 (415)
Q Consensus 178 ~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~-~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~ 256 (415)
++++++++ .. .++++|+++|+++|+++|+|++|.... +.+.....+. . ..+++.|+||++ +|.|.||
T Consensus 170 ~~~~~~~~--~~---~~~~~I~~la~~~~~~livD~a~~~g~~~~g~~~~~~~--~---~di~~~S~~K~l--~g~~gg~ 237 (416)
T PRK00011 170 IAGASAYS--RP---IDFKRFREIADEVGAYLMVDMAHIAGLVAAGVHPSPVP--H---ADVVTTTTHKTL--RGPRGGL 237 (416)
T ss_pred EECCCcCC--Cc---cCHHHHHHHHHHcCCEEEEECcchhcccccCccCCCCC--C---CcEEEecCCcCC--CCCCceE
Confidence 88766554 33 357889999999999999999986432 2222122222 1 137789999974 6888999
Q ss_pred EEeeCCCCCCChHHHHHHHHhhcccc--CCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCC
Q 014936 257 FVTTDPCGMFRKPKVVERMKKYFDIL--GDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHK 334 (415)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~ 334 (415)
+++++ +++.+.++...... .++....+.++..++.....+++++..++++++++.+.+.|+++ ++.+...
T Consensus 238 i~~~~-------~~~~~~l~~~~~~~~~~~~~~~~~aa~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~ 309 (416)
T PRK00011 238 ILTND-------EELAKKINSAVFPGIQGGPLMHVIAAKAVAFKEALEPEFKEYAQQVVKNAKALAEALAER-GFRVVSG 309 (416)
T ss_pred EEeCC-------HHHHHHHHHHhCccccCCccHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhC-CCeeeec
Confidence 99864 25777776553221 22222233333233322222457888899999999999999987 7763211
Q ss_pred CCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCC-C-----CCCCeEEEEe------eCChhhHHHHHHHHH
Q 014936 335 PEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTA-V-----GLKNWLRVTF------AVDPYSLEECLDRIK 402 (415)
Q Consensus 335 p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~-~-----~~~~~iRi~~------~~~~~~l~~~l~~l~ 402 (415)
...++++|+.++... .+..++ ...|+++||.+..+.. + ..+..+|++. +.++++++.+++.|+
T Consensus 310 ~~~~~~~~i~~~~~~----~~~~~~-~~~L~~~GI~v~~~~~p~~~~~~~~~~~~Ri~~~~~~~~~~t~~di~~l~~~l~ 384 (416)
T PRK00011 310 GTDNHLVLVDLRSKG----LTGKEA-EAALEEANITVNKNAVPFDPRSPFVTSGIRIGTPAITTRGFKEAEMKEIAELIA 384 (416)
T ss_pred CCCCeEEEEeCcccC----CCHHHH-HHHHHHcCcEEccCcCCCCCCCCCCCCceEecCHHHhhcCcCHHHHHHHHHHHH
Confidence 233588888885321 134454 4455778999974321 1 1246799965 346899999999999
Q ss_pred HHHHH
Q 014936 403 SFYQR 407 (415)
Q Consensus 403 ~~~~~ 407 (415)
+++..
T Consensus 385 ~~~~~ 389 (416)
T PRK00011 385 DVLDN 389 (416)
T ss_pred HHHhc
Confidence 87664
No 185
>TIGR02080 O_succ_thio_ly O-succinylhomoserine (thiol)-lyase. This family consists of O-succinylhomoserine (thiol)-lyase, one of three different enzymes designated cystathionine gamma-synthase and involved in methionine biosynthesis. In all three cases, sulfur is added by transsulfuration from Cys to yield cystathionine rather than by a sulfhydrylation step that uses H2S directly and bypasses cystathionine.
Probab=99.95 E-value=1.2e-24 Score=203.39 Aligned_cols=227 Identities=18% Similarity=0.189 Sum_probs=170.8
Q ss_pred CCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHH----HhCC
Q 014936 70 FNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSA----AFRH 145 (415)
Q Consensus 70 ~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~----~~~g 145 (415)
+.+|+++ ...+|++.+|++. ..+++++++|+++++.+++.+++++||+|+++.|+|......+ ...+
T Consensus 45 Y~R~~~p-~~~~le~~lA~l~--------g~~~v~~~~gg~~Ai~~~l~all~~GD~Vl~~~p~y~~~~~~~~~~~~~~~ 115 (382)
T TIGR02080 45 YSRSGNP-TRDLLQQALAELE--------GGAGAVVTNTGMSAIHLVTTALLGPDDLLVAPHDCYGGTYRLLNALAKKGC 115 (382)
T ss_pred ccCCCCc-hHHHHHHHHHHHh--------CCCcEEEEcCHHHHHHHHHHHHcCCCCEEEEcCCCcHHHHHHHHHHHhhcC
Confidence 5677764 5689999999987 3568999999999999999999999999999999998655433 2234
Q ss_pred CeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCc
Q 014936 146 IEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPF 225 (415)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~ 225 (415)
.++..++. .|++.+++++++++++|++++|+||||.+++ +++|+++|+++|+++|+|++|..+...
T Consensus 116 ~~v~~~d~-------~d~~~l~~ai~~~tklV~l~~p~NPtG~~~d---l~~I~~la~~~g~~vvvD~a~~~~~~~---- 181 (382)
T TIGR02080 116 FRVLFVDQ-------GDEQALRAALAQKPKLVLIETPSNPLLRVVD---IAKICHLAKAVGAVVVVDNTFLSPALQ---- 181 (382)
T ss_pred eEEEEECC-------CCHHHHHHhcCcCceEEEEECCCCCCCEecC---HHHHHHHHHHcCCEEEEECCCcccccC----
Confidence 55554421 3789999999889999999999999999976 567788888999999999999764422
Q ss_pred ccccccCCCCCeEEEccCccccC-CCCceEEEEEeeCCCCCCChHHHHHHHHhhcc-ccCCchhHHHHHHHHhhCCCcHH
Q 014936 226 VPMGVFGSTVPILTLGSLSKRWI-VPGWRLGWFVTTDPCGMFRKPKVVERMKKYFD-ILGDPATFIQAAVPSILQQPDEV 303 (415)
Q Consensus 226 ~~~~~~~~~~~~i~~~s~sK~~~-~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~a~~~~l~~~~~~ 303 (415)
.++ .++.+ ++++|+||.++ .++++.|++++++ +++.+++..... .+...++.....+...++
T Consensus 182 ~pl-~~gaD---ivv~S~sK~l~G~~~~~~G~i~~~~-------~~~~~~l~~~~~~~g~~~sp~~a~l~lr~l~----- 245 (382)
T TIGR02080 182 NPL-ALGAD---LVLHSCTKYLNGHSDVIAGAVIAKD-------PQVAEELAWWANNLGVTGGAFDSYLTLRGLR----- 245 (382)
T ss_pred Cch-hhCCC---EEEeecceeccCCCCceeEEEEeCC-------HHHHHHHHHHHHccCCCCCHHHHHHHHcccc-----
Confidence 122 12222 88899999876 4778999988754 256666665533 345667776666655554
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCC
Q 014936 304 FFKKTLNLLKQSVDICYNKIKEIPCISCPHKP 335 (415)
Q Consensus 304 ~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p 335 (415)
-+..+.++..+++..+.+.|+..|.+..+.+|
T Consensus 246 tl~~R~~~~~~na~~~a~~L~~~p~v~~V~yP 277 (382)
T TIGR02080 246 TLVARMRLQQRNAQAIVEYLQTQPLVKKIYYP 277 (382)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhCCCeeEEECC
Confidence 36666788889999999999987765544444
No 186
>TIGR01437 selA_rel uncharacterized pyridoxal phosphate-dependent enzyme. This model describes a protein related to a number of pyridoxal phosphate-dependent enzymes, and in particular to selenocysteine synthase (SelA), which converts Ser to selenocysteine on its tRNA. While resembling SelA, this protein is found only in species that have a better candidate SelA or else lack the other genes (selB, selC, and selD) required for selenocysteine incorporation.
Probab=99.95 E-value=5.3e-25 Score=205.16 Aligned_cols=322 Identities=16% Similarity=0.126 Sum_probs=211.9
Q ss_pred cceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHH
Q 014936 35 KKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAID 114 (415)
Q Consensus 35 ~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~ 114 (415)
.++||-.---.. .....+++++++++.+..++ |. +..++++++++++++.+| .+++++|+|+|+++.
T Consensus 8 ~~~ina~g~~t~-~g~s~~~~~v~~a~~~~~~~-----~~---~~~~~~~~~~~~~a~~~g----~~~~~~~~g~t~al~ 74 (363)
T TIGR01437 8 KKVINASGKMTI-LGVSTVSDEVADAQKRGAQN-----YF---EIKELVNKTGEYIANLLG----VEDAVIVSSASAGIA 74 (363)
T ss_pred ceEEECCcEeec-CCCCCCCHHHHHHHHHHHhc-----CC---CHHHHHHHHHHHHHHhhC----CCeEEEEcCHHHHHH
Confidence 455665433322 22245789999999998642 22 235677777777766555 357899999999999
Q ss_pred HHHHHhcCCCC---------------EEEEcCCCCcch----HHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCce
Q 014936 115 VAMALLSRPGA---------------NILLPRPGFPIY----ELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTV 175 (415)
Q Consensus 115 ~~~~~l~~~gd---------------~vi~~~p~y~~~----~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 175 (415)
+++.+++++|| +|+++.|.|..+ ...+...|++++.++. ++.+|+++++++++++|+
T Consensus 75 ~al~al~~~Gd~~~~~~~~~s~~~~~eVi~~~~~~~~~~~~~~~~~~~~g~~~v~v~~----~~~~d~~~le~ai~~~t~ 150 (363)
T TIGR01437 75 QSVAAVITRGNRYLVENLHDSKIEVNEVVLPKGHNVDYGAPVETMVRLGGGKVVEAGY----ANECSAEQLEAAITEKTA 150 (363)
T ss_pred HHHHHHhcCCCcchhhcccccccccceEEEECccchhcCCchHHHHHhcCCeEEEEcC----CCCCCHHHHHHhcChhce
Confidence 99999999998 999999888755 4667788999988875 235899999999999999
Q ss_pred EEE-ecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceE
Q 014936 176 ALV-IINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRL 254 (415)
Q Consensus 176 ~v~-i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~ 254 (415)
+++ +++|+||+|.+.+ +++|+++|+++|+++|+|++|+.-. ..+..++. .+++.|+||.+ +|++.
T Consensus 151 ai~~v~~~~~~~g~~~~---~~~i~~~a~~~gi~vivD~a~~~~~------~~~~~~g~---D~~~~S~~K~l--~gp~~ 216 (363)
T TIGR01437 151 AILYIKSHHCVQKSMLS---VEDAAQVAQEHNLPLIVDAAAEEDL------QKYYRLGA---DLVIYSGAKAI--EGPTS 216 (363)
T ss_pred EEEEEecCCCCcCCcCC---HHHHHHHHHHcCCeEEEECCCCCch------HHHHHcCC---CEEEEeCCccc--CCCce
Confidence 776 5678999999866 5678899999999999999997211 11122322 27778999974 67789
Q ss_pred EEEEeeCCCCCCChHHHHHHHHhhccc------cCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCC
Q 014936 255 GWFVTTDPCGMFRKPKVVERMKKYFDI------LGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPC 328 (415)
Q Consensus 255 G~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~ 328 (415)
|+++.++ ++++.++..... .+..+..++.++...+... ..+..+.+.++++.+.+.|+++|+
T Consensus 217 G~l~~~~--------~~i~~~~~~~~~~~~~~~~~~~~~~gl~aAl~~~~~~----~~~~~~~~~~~~~~l~~~L~~i~g 284 (363)
T TIGR01437 217 GLVLGKK--------KYIEWVKLQSKGIGRAMKVGKENILGLTAALEQYLST----GKESGAEMVAKLTPFIEALNTLKG 284 (363)
T ss_pred EEEEEcH--------HHHHHHHhccCCCcceeccCHHHHHHHHHHHHHHHcc----CcccHHHHHHHHHHHHHHHhcCCC
Confidence 9988754 455555332211 0112223333333333221 123333444567789999999988
Q ss_pred CcCCCC-CCCce---EEEEecCccccCCCCCHHHHHHHHHhhcC--eEEEcCCCCCCCCeEEEEe-eCChhhHHHHHHHH
Q 014936 329 ISCPHK-PEGSM---AVMLKLNLSLLDDIIDDIDFCFKLAKEES--VIILPGTAVGLKNWLRVTF-AVDPYSLEECLDRI 401 (415)
Q Consensus 329 ~~~~~~-p~~g~---~~~~~l~~~~~~~~~~~~~~~~~ll~~~g--i~v~~g~~~~~~~~iRi~~-~~~~~~l~~~l~~l 401 (415)
+.+... +..+. ...+.++... .+ .+..++...| ++++ |.+++ .+...+.+|+++ ..+++|++.++++|
T Consensus 285 ~~~~~~~~~~~~~~~~~~v~~~~~~-~g-~~~~~l~~~L-~~~~~~I~~r~--~~~~~~~~~l~~~~~~~~e~~~~~~~l 359 (363)
T TIGR01437 285 VSASIVQDEAGRDIARAEIRFDESE-LG-MTAADVVQAL-RQGEPAIYTRG--YKANEGIIEIDPRSVTGGQLDIIVERI 359 (363)
T ss_pred eEEEEecCCCCCcCceEEEEEeccC-CC-CCHHHHHHHH-hcCCCCEEEee--eeecCCeEEEEeecCCHHHHHHHHHHH
Confidence 874311 11111 1112232110 01 2566766665 5556 55554 455578999999 46789999999998
Q ss_pred HHH
Q 014936 402 KSF 404 (415)
Q Consensus 402 ~~~ 404 (415)
.++
T Consensus 360 ~~~ 362 (363)
T TIGR01437 360 REI 362 (363)
T ss_pred HHh
Confidence 875
No 187
>PRK08861 cystathionine gamma-synthase; Provisional
Probab=99.95 E-value=2e-24 Score=201.31 Aligned_cols=227 Identities=15% Similarity=0.173 Sum_probs=175.4
Q ss_pred CCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHH----HHhCC
Q 014936 70 FNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELS----AAFRH 145 (415)
Q Consensus 70 ~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~----~~~~g 145 (415)
+.+|+++ ....|++++|++. ..+++++++|+++++.+++.+++++||+|+++.|+|...... +...|
T Consensus 47 Y~R~~np-t~~~Le~~lA~le--------g~e~ivvt~gg~~Ai~~~l~all~~Gd~Il~~~~~y~~~~~~~~~~~~~~g 117 (388)
T PRK08861 47 YTRSGNP-NRGLLEQTLSELE--------SGKGAVVTNCGTSALNLWVSALLGPDDLIVAPHDCYGGTYRLFNTRANKGD 117 (388)
T ss_pred ccCCCCc-hHHHHHHHHHHHh--------CCCeEEEECCHHHHHHHHHHHHcCCCCEEEEcCCchHHHHHHHHHHHhcCC
Confidence 4566664 5789999999998 368999999999999999999999999999999999864433 23456
Q ss_pred CeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCc
Q 014936 146 IEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPF 225 (415)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~ 225 (415)
+++..++. .|++++++++++++++|++++|+||||.+++ +++|+++|+++|+++|+|++|....+.
T Consensus 118 i~v~~vd~-------~d~e~l~~~i~~~tklV~lesP~NPtG~v~d---l~~I~~la~~~gi~vIvDea~~~~~~~---- 183 (388)
T PRK08861 118 FKVQFVDQ-------SDAAALDAALAKKPKLILLETPSNPLVRVVD---IAELCQKAKAVGALVAVDNTFLTPVLQ---- 183 (388)
T ss_pred eEEEEECC-------CCHHHHHHhcCcCCeEEEEECCCCCCCcccC---HHHHHHHHHHcCCEEEEECCccccccC----
Confidence 77777642 4789999999889999999999999999987 557777888999999999999864422
Q ss_pred ccccccCCCCCeEEEccCccccCCC-CceEEEEEeeCCCCCCChHHHHHHHHhhc-cccCCchhHHHHHHHHhhCCCcHH
Q 014936 226 VPMGVFGSTVPILTLGSLSKRWIVP-GWRLGWFVTTDPCGMFRKPKVVERMKKYF-DILGDPATFIQAAVPSILQQPDEV 303 (415)
Q Consensus 226 ~~~~~~~~~~~~i~~~s~sK~~~~~-G~r~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~a~~~~l~~~~~~ 303 (415)
.++ .++.+ +++.|++|.++.+ +...|++++++ +++.+.++... ......+|.....+..-|+.
T Consensus 184 ~pl-~~GaD---ivv~S~tK~l~G~~d~~gG~i~~~~-------~~~~~~~~~~~~~~G~~~~p~~a~l~~rgl~T---- 248 (388)
T PRK08861 184 KPL-ELGAD---FVIHSTTKYINGHSDVIGGVLITKT-------KEHAEELAWWGNCIGATGTPFDSYMTLRGIRT---- 248 (388)
T ss_pred CCc-ccCCC---EEEeecceeccCCCcceeEEEEecH-------HHHHHHHHHHHhccCCCCChHHHHHHHhcCCC----
Confidence 122 23333 8889999997654 47788887754 24666665543 33456678887877777776
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCC
Q 014936 304 FFKKTLNLLKQSVDICYNKIKEIPCISCPHKP 335 (415)
Q Consensus 304 ~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p 335 (415)
+.-+.++..+++..+.+.|+..|.+..+.+|
T Consensus 249 -l~lR~~~~~~~a~~~a~~L~~~p~v~~V~yP 279 (388)
T PRK08861 249 -LGARMRVHEESAQQILAYLQTQSLVGTIYHP 279 (388)
T ss_pred -HHHHHHHHHHHHHHHHHHHHhCCCeeEEECC
Confidence 7778888899999999999988776545455
No 188
>PRK04260 acetylornithine aminotransferase; Provisional
Probab=99.95 E-value=1.4e-24 Score=204.37 Aligned_cols=333 Identities=13% Similarity=0.092 Sum_probs=229.7
Q ss_pred cCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCC-cEEEeCChHH
Q 014936 33 NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPN-DVFVTSGCTQ 111 (415)
Q Consensus 33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~-~i~i~~g~~~ 111 (415)
+++.++|+..|.-. .+++.+|++++++.+++.... .+++ ....++++.+++.+.. .++ .+++++++++
T Consensus 27 dg~~~lD~~s~~~~--~~lG~~p~v~~a~~~~~~~~~--~~~~-~~~~~~~~~la~~l~~------~~~~~~~~~~SGse 95 (375)
T PRK04260 27 DGKKYLDFSSGIGV--TNLGFHPQVQQALQKQAGLIW--HSPN-LYLNSLQEEVAQKLIG------DKDYLAFFCNSGAE 95 (375)
T ss_pred CCCEEEECCCCccc--ccCCCCHHHHHHHHHHHHhcC--cccC-ccCCHHHHHHHHHHhc------CcCCEEEEcCccHH
Confidence 47789999877422 235668999999999887532 2332 2356789999998742 234 4689999999
Q ss_pred HHHHHHHHhc--CCCCEEEEcCCCCcchH-HHHHhCCCeEE------EeeccCCCCCCCChhHHHhhcCCCceEEEecCC
Q 014936 112 AIDVAMALLS--RPGANILLPRPGFPIYE-LSAAFRHIEVR------HFDLLPDKGWEVDLDDIESLADQNTVALVIINP 182 (415)
Q Consensus 112 al~~~~~~l~--~~gd~vi~~~p~y~~~~-~~~~~~g~~~~------~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p 182 (415)
++..+++... .++++|++.+.+|++.. ..+...|.+.. .++..+... ..|++.+++.+++++.++++..+
T Consensus 96 A~~~Al~~ar~~~~~~~vv~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~dl~~l~~~l~~~~a~vi~e~v 174 (375)
T PRK04260 96 ANEAAIKIARKATGKQEIITFQNSFHGRTFGSMSATGQDKIKDGFGDGVPHFSYAI-FNDLNSVKALVNKNTAAVMLELV 174 (375)
T ss_pred HHHHHHHHHHHhcCCCeEEEECCCcCcccHHHHhccCCcccCCCCCCCCCCeEEeC-CCCHHHHHHhcCCCeEEEEECCe
Confidence 9998888763 34578888888888643 33222222110 000000001 14789999988777777888888
Q ss_pred CCccccCC-CHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeC
Q 014936 183 GNPCGNVY-SYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTD 261 (415)
Q Consensus 183 ~nptG~~~-~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~ 261 (415)
+|++|... +.+.++++.++|+++|+++|+||+|.++...+... .....+..++ +.||||.+ .+|+|+||+++++
T Consensus 175 ~~~~G~~~~~~~~l~~~~~l~~~~~~~~i~De~~~g~g~~g~~~-~~~~~~~~pd---i~t~sK~l-~~G~~ig~~~~~~ 249 (375)
T PRK04260 175 QGESGVLPADKDFVKALADYCQETGILLIVDEVQTGMGRTGKLY-AFEHYGIEPD---IFTLAKGL-ANGVPVGAMLAKS 249 (375)
T ss_pred ECCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCcccchh-hhHhhCCCCC---EEEecccc-cCCcceEEEEEcH
Confidence 99999874 56789999999999999999999998765544322 2112222222 33899996 4789999999975
Q ss_pred CCCCCChHHHHHHHHhh-ccccCCchhHHHHHHHHhhCCCc-HHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCce
Q 014936 262 PCGMFRKPKVVERMKKY-FDILGDPATFIQAAVPSILQQPD-EVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSM 339 (415)
Q Consensus 262 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~a~~~~l~~~~-~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~ 339 (415)
++.+.+... ...+.+.+++.+.++.++|+... ++..++.++..+..++.+.+.+.+.+.+. . .+..|+
T Consensus 250 --------~~~~~~~~~~~~~t~~~~~~~~~aa~a~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~-~~~~g~ 319 (375)
T PRK04260 250 --------SLGGAFGYGSHGSTFGGNKLSMAAASATLDIMLTAGFLEQALENGNYLQEQLQKALQDKETVT-T-VRGLGY 319 (375)
T ss_pred --------HHHhhcCCCCCCCCCCcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhhCCCee-E-Eeccce
Confidence 566666543 23346678889999999986543 35566677777777777777776664333 2 345799
Q ss_pred EEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEe--eCChhhHHHHHHHHHHH
Q 014936 340 AVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTF--AVDPYSLEECLDRIKSF 404 (415)
Q Consensus 340 ~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~--~~~~~~l~~~l~~l~~~ 404 (415)
++|++++. +..++...+ .++||.+.|+. .+.+|+++ ..+++++++++++|+++
T Consensus 320 ~~~~~~~~-------~~~~~~~~l-~~~Gi~v~~~~----~~~lR~~~~~~~t~~~i~~~l~~l~~~ 374 (375)
T PRK04260 320 MIGIETTA-------DLSQLVEAA-RDKGLIVLTAG----TNVIRLLPPLTLTKEEIEQGIAILSEV 374 (375)
T ss_pred EEEEEecC-------cHHHHHHHH-HhCCCEEecCC----CCEEEEcCCCccCHHHHHHHHHHHHHh
Confidence 99998842 355666655 56799998753 47899999 36899999999999765
No 189
>PRK09028 cystathionine beta-lyase; Provisional
Probab=99.94 E-value=3.6e-24 Score=199.24 Aligned_cols=314 Identities=15% Similarity=0.103 Sum_probs=212.9
Q ss_pred CCCcHHHHHHHHHHHhcCCCCCCCC--CCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEE
Q 014936 51 FHTTHVATEAVAEALLSEKFNGYAP--TAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANIL 128 (415)
Q Consensus 51 ~~~~~~~~~a~~~~~~~~~~~~y~~--~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi 128 (415)
+..++.+.++...... ....|+. ..+...||+.||++. ..+++++++|+++|+..++.+++++||+|+
T Consensus 35 ~~~~~~~~~~~~~~~~--~~~~Y~r~~npt~~~Le~~iA~le--------~~~~~~~~~sG~~Ai~~~l~all~~GD~Vv 104 (394)
T PRK09028 35 FDTVAEMRHAAKNRAN--GEMFYGRRGTPTHFAFQAAIVELE--------GGAGTALYPSGAAAISNALLSFLKAGDHLL 104 (394)
T ss_pred cCCHHHHHHHhccCcc--CCceecCCCCchHHHHHHHHHHHh--------CCCcEEEECCHHHHHHHHHHHHhCCCCEEE
Confidence 4445555554433211 1124544 235679999999986 335789999999999999999999999999
Q ss_pred EcCCCCcchHHHH----HhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhh
Q 014936 129 LPRPGFPIYELSA----AFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANK 204 (415)
Q Consensus 129 ~~~p~y~~~~~~~----~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~ 204 (415)
+++|.|.++...+ ...|+++..++. .+.+.+++++++++++|++.+|+||||.+ .++++|+++|++
T Consensus 105 v~~~~Y~~t~~l~~~~l~~~Gi~v~~v~~-------~~~e~l~~~l~~~TklV~lespsNPtg~v---~dl~~I~~la~~ 174 (394)
T PRK09028 105 MVDSCYEPTRDLCDKILKGFGIETTYYDP-------MIGEGIRELIRPNTKVLFLESPGSITMEV---QDVPTLSRIAHE 174 (394)
T ss_pred EECCCcHHHHHHHHHhhhhcceEEEEECC-------CCHHHHHHhcCcCceEEEEECCCCCCCcH---HHHHHHHHHHHH
Confidence 9999998876543 457888776642 14578899998899999999999999888 889999999999
Q ss_pred cCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCC-CceEEEEEeeCCCCCCChHHHHHHHHhhc-ccc
Q 014936 205 LKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVP-GWRLGWFVTTDPCGMFRKPKVVERMKKYF-DIL 282 (415)
Q Consensus 205 ~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~-G~r~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 282 (415)
+|+++++|++|+... ...++ .++.+ +++.|.+|.++.+ ++-.|+++.++ ++.+.+.... ...
T Consensus 175 ~g~~lvvD~t~a~p~----~~~Pl-~~GaD---ivv~S~tK~l~Gh~d~~~G~~~~~~--------~~~~~l~~~~~~~G 238 (394)
T PRK09028 175 HDIVVMLDNTWASPI----NSRPF-EMGVD---ISIQAATKYIVGHSDVMLGTATANE--------KHWDQLREHSYLMG 238 (394)
T ss_pred cCCEEEEECCccccc----cCCcc-ccCce---EEEEeCCeEecCCCCEEEEEEECCH--------HHHHHHHHHHHhcC
Confidence 999999999998632 11222 23443 8999999998665 46667655432 4555555432 334
Q ss_pred CCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCC----------------CceEEEEecC
Q 014936 283 GDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPE----------------GSMAVMLKLN 346 (415)
Q Consensus 283 ~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~----------------~g~~~~~~l~ 346 (415)
...++.....+..-|+. +.-+.++..+++..+.+.|++.|.+..+.+|. .|-.+.+.++
T Consensus 239 ~~~~p~~a~l~~rgl~T-----L~lR~~~~~~na~~la~~L~~~p~v~~V~yPgl~s~p~~~~~~~~~~g~gg~~sf~l~ 313 (394)
T PRK09028 239 QCTSPDDVYLAMRGLRT-----LGVRLAQHEKNALKVANWLATRPEVDHVRHPAFETCPGHEFFKRDFSGSNGLFSFVLK 313 (394)
T ss_pred CCCCHHHHHHHHcccCc-----HHHHHHHHHHHHHHHHHHHhcCCCccEEECCCCCCCccHHHHHHhccCCCceEEEEEC
Confidence 56788877777777765 78888999999999999999888766555552 2334555564
Q ss_pred ccccCCCCCHHHHHHHHHhhcCeEEEcCCCCC-------------------CCCeEEEEeeCChhhHHHHHHHHHHHHHH
Q 014936 347 LSLLDDIIDDIDFCFKLAKEESVIILPGTAVG-------------------LKNWLRVTFAVDPYSLEECLDRIKSFYQR 407 (415)
Q Consensus 347 ~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~-------------------~~~~iRi~~~~~~~~l~~~l~~l~~~~~~ 407 (415)
.. +......|+..+ +-..+.++-|.... .++.||+|++.. +.+.+++.|.++++.
T Consensus 314 ~~---~~~~~~~f~~~l-~l~~~~~slG~~~sLv~~p~~~~~~~~~~~~~~~~~liR~svGlE--d~~dLi~Dl~~Al~~ 387 (394)
T PRK09028 314 QG---DPKAVTALVEGM-QHFKMGFSWGGFESLILGVFGINKLRTATNWDFSKPLIRLHIGLE--DVDDLIADLEAGFER 387 (394)
T ss_pred CC---CHHHHHHHHHhC-CcceEecccCCCcceeECCCCcCccCchhhhcCCCCeEEEEeCcC--CHHHHHHHHHHHHHH
Confidence 21 001122333332 22222222222111 025699999874 466666777777766
Q ss_pred HHHH
Q 014936 408 HAKQ 411 (415)
Q Consensus 408 ~~~~ 411 (415)
+...
T Consensus 388 ~~~~ 391 (394)
T PRK09028 388 YNAV 391 (394)
T ss_pred HHHH
Confidence 5544
No 190
>PRK07810 O-succinylhomoserine sulfhydrylase; Provisional
Probab=99.94 E-value=1.7e-24 Score=203.76 Aligned_cols=227 Identities=16% Similarity=0.141 Sum_probs=174.4
Q ss_pred CCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcc----hHHHHHhCC
Q 014936 70 FNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPI----YELSAAFRH 145 (415)
Q Consensus 70 ~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~----~~~~~~~~g 145 (415)
+.+|+++ ...+|++.+|++. ..++.+++++|+.++..++.++.++||+|+++...|.+ +...++..|
T Consensus 64 Y~r~~~p-~~~~le~~lA~l~--------g~~~al~~~sG~~Ai~~~l~all~~Gd~Vl~~~~~~~~t~~~~~~~~~~~G 134 (403)
T PRK07810 64 YSRYGNP-TVSMFEERLRLIE--------GAEACFATASGMSAVFTALGALLGAGDRLVAARSLFGSCFVVCNEILPRWG 134 (403)
T ss_pred eeCCCCc-hHHHHHHHHHHHh--------CCCcEEEECChHHHHHHHHHHHhCCCCEEEEccCCcchHHHHHHHHHHHcC
Confidence 4566764 4789999999998 34588899999999999999999999999999866644 345567789
Q ss_pred CeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCc
Q 014936 146 IEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPF 225 (415)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~ 225 (415)
+++..++. .|++++++++++++++|++.+|+||+|.+. ++++|+++|+++|+++|+|++|+...+..
T Consensus 135 ~~v~~vd~-------~d~~~l~~ai~~~tklV~~esp~Nptg~v~---dl~~I~~la~~~g~~vivD~a~a~~~~~~--- 201 (403)
T PRK07810 135 VETVFVDG-------EDLSQWEEALSVPTQAVFFETPSNPMQSLV---DIAAVSELAHAAGAKVVLDNVFATPLLQR--- 201 (403)
T ss_pred cEEEEECC-------CCHHHHHHhcCcCceEEEEECCCCCCCeec---CHHHHHHHHHHcCCEEEEECCCCccccCC---
Confidence 99988864 388999999998999999999999999995 58888888999999999999998654321
Q ss_pred ccccccCCCCCeEEEccCccccCCCCceE-EEEEeeCCCCCCChHHHHHHHHhh-ccccCCchhHHHHHHHHhhCCCcHH
Q 014936 226 VPMGVFGSTVPILTLGSLSKRWIVPGWRL-GWFVTTDPCGMFRKPKVVERMKKY-FDILGDPATFIQAAVPSILQQPDEV 303 (415)
Q Consensus 226 ~~~~~~~~~~~~i~~~s~sK~~~~~G~r~-G~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~a~~~~l~~~~~~ 303 (415)
++ .++. .+++.|++|.++..|.++ |++++++ . .+.+.++.. .......++..+..+...|+.
T Consensus 202 -~~-~~ga---Divv~S~tK~l~g~g~~~gG~v~~~~-~------~~~~~l~~~~~~~g~~~s~~~a~l~l~~L~t---- 265 (403)
T PRK07810 202 -GL-PLGA---DVVVYSGTKHIDGQGRVLGGAILGDR-E------YIDGPVQKLMRHTGPALSAFNAWVLLKGLET---- 265 (403)
T ss_pred -hh-hcCC---cEEEccCCceecCCcCceeEEEEeCh-H------HHHHHHHHHHHHhCCCCCHHHHHHHHhccCc----
Confidence 11 2232 388899999998889887 6666544 1 132334433 233456788888887777765
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCC
Q 014936 304 FFKKTLNLLKQSVDICYNKIKEIPCISCPHKP 335 (415)
Q Consensus 304 ~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p 335 (415)
+..+.++..++...+.+.|++.|.+..+.+|
T Consensus 266 -l~~R~~~~~~~a~~~a~~L~~~p~v~~V~yP 296 (403)
T PRK07810 266 -LALRVRHSNASALRIAEFLEGHPAVRWVRYP 296 (403)
T ss_pred -HHHHHHHHHHHHHHHHHHHhcCCCccEEECC
Confidence 7788888888999999999988877655444
No 191
>cd00614 CGS_like CGS_like: Cystathionine gamma-synthase is a PLP dependent enzyme and catalyzes the committed step of methionine biosynthesis. This pathway is unique to microorganisms and plants, rendering the enzyme an attractive target for the development of antimicrobials and herbicides. This subgroup also includes cystathionine gamma-lyases (CGL), O-acetylhomoserine sulfhydrylases and O-acetylhomoserine thiol lyases. CGL's are very similar to CGS's. Members of this group are widely distributed among all three forms of life.
Probab=99.94 E-value=2e-24 Score=202.16 Aligned_cols=285 Identities=14% Similarity=0.136 Sum_probs=203.0
Q ss_pred CCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHH----HHhCCCe
Q 014936 72 GYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELS----AAFRHIE 147 (415)
Q Consensus 72 ~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~----~~~~g~~ 147 (415)
+|++ +...+|++.++++. ..+..+++++|++|+..++.+++++||+|+++.++|+..... +...|++
T Consensus 36 r~~~-p~~~~le~~la~l~--------g~~~a~~~~sG~~Ai~~~l~~l~~~gd~Vl~~~~~y~~~~~~~~~~~~~~g~~ 106 (369)
T cd00614 36 RIGN-PTVDALEKKLAALE--------GGEAALAFSSGMAAISTVLLALLKAGDHVVASDDLYGGTYRLFERLLPKLGIE 106 (369)
T ss_pred CCCC-hhHHHHHHHHHHHH--------CCCCEEEEcCHHHHHHHHHHHHcCCCCEEEECCCCcchHHHHHHHHHhhcCeE
Confidence 3444 56789999999987 235778888899999999999999999999999999886543 4567888
Q ss_pred EEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCccc
Q 014936 148 VRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVP 227 (415)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~ 227 (415)
+..++.+ |++++++++++++++|++.+|+||+|.+.+ +++|+++|+++|+++|+|++|+...+. .+
T Consensus 107 ~~~v~~~-------d~~~l~~~i~~~~~~v~~e~~~np~g~~~d---l~~i~~la~~~g~~livD~t~~~~~~~----~~ 172 (369)
T cd00614 107 VTFVDPD-------DPEALEAAIKPETKLVYVESPTNPTLKVVD---IEAIAELAHEHGALLVVDNTFATPYLQ----RP 172 (369)
T ss_pred EEEeCCC-------CHHHHHHhcCCCCeEEEEECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCcchhcC----Ch
Confidence 8877642 589999999888999999999999999965 778888999999999999999864431 11
Q ss_pred ccccCCCCCeEEEccCccccCCCC-ceEEEEEeeCCCCCCChHHHHHHHHhhc-cccCCchhHHHHHHHHhhCCCcHHHH
Q 014936 228 MGVFGSTVPILTLGSLSKRWIVPG-WRLGWFVTTDPCGMFRKPKVVERMKKYF-DILGDPATFIQAAVPSILQQPDEVFF 305 (415)
Q Consensus 228 ~~~~~~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~a~~~~l~~~~~~~~ 305 (415)
+ .++. .+++.|++|.++.+| .+.||+++++ .++++.++... ......++....++...|+. +
T Consensus 173 ~-~~g~---Divv~S~tK~l~g~~~~~gG~v~~~~-------~~l~~~l~~~~~~~g~~~~p~~a~~~l~~l~t-----l 236 (369)
T cd00614 173 L-ELGA---DIVVHSATKYIGGHSDVIAGVVVGSG-------EALIQRLRFLRLALGTILSPFDAWLLLRGLKT-----L 236 (369)
T ss_pred h-hhCC---cEEEeccceeccCCCCceEEEEEeCc-------HHHHHHHHHHHHhhCCCCCHHHHHHHHcCCCC-----H
Confidence 1 1222 388999999987766 7899999854 14666666553 23455677766666666653 5
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCCCcCCCCC----------------CCceEEEEecCccccCCCCCHHHHHHHHHhhcCe
Q 014936 306 KKTLNLLKQSVDICYNKIKEIPCISCPHKP----------------EGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESV 369 (415)
Q Consensus 306 ~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p----------------~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi 369 (415)
..+.++..+++..+.+.|++.|++..+.+| ..|..+.+.++. +.+....++..-++
T Consensus 237 ~~r~~~~~~na~~la~~L~~~~~v~~V~~p~l~~~~~~~~~~~~~~g~g~i~s~~l~~--------~~~~~~~f~~~l~~ 308 (369)
T cd00614 237 PLRMERHSENALKVAEFLEKHPKVERVYYPGLPSHPQHELAKKQMSGYGGVFSFELKG--------GLEAAKKFLNALKL 308 (369)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCccEEECCCCCCCchHHHHHHhcCCCceEEEEEeCC--------CHHHHHHHHHcCCc
Confidence 667788889999999999988766544445 235566666642 11223333343343
Q ss_pred E---EEcCCCC----------------------CC-CCeEEEEeeCChhhHHHHHHHHHHHH
Q 014936 370 I---ILPGTAV----------------------GL-KNWLRVTFAVDPYSLEECLDRIKSFY 405 (415)
Q Consensus 370 ~---v~~g~~~----------------------~~-~~~iRi~~~~~~~~l~~~l~~l~~~~ 405 (415)
. ++-|... +. ++-+|+|++. |+.+.+++.|.+++
T Consensus 309 ~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~liR~svGl--E~~~dl~~dl~~al 368 (369)
T cd00614 309 FSLAVSLGGVESLVEHPASMTHSQLPPEERAAAGITPGLVRLSVGI--EDVEDLIADLEQAL 368 (369)
T ss_pred ceEcccCCCCceeeeCCcccccccCCHHHHHhcCCCCCeEEEEeCc--CCHHHHHHHHHHhh
Confidence 3 2222211 11 3579999987 46677777777664
No 192
>PRK07505 hypothetical protein; Provisional
Probab=99.94 E-value=2.1e-24 Score=204.97 Aligned_cols=332 Identities=14% Similarity=0.117 Sum_probs=205.5
Q ss_pred ccCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCC-CCCCC-----CCCCcHHHHHHHHHHHhhhCCCCCCCCcEEE
Q 014936 32 KNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEK-FNGYA-----PTAGLPLTRRAIAEYLSRDLPYKLTPNDVFV 105 (415)
Q Consensus 32 ~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~-~~~y~-----~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i 105 (415)
.+|+.++||..++ ..++..+|++.+++.+++.... ..... ......++++.+++++ + . +.++
T Consensus 43 ~~g~~~ld~~s~~---~lgl~~~p~v~~A~~~~l~~~g~~~~~~~~~~~~~~~~~~l~~~la~~~----~--~---~~~~ 110 (402)
T PRK07505 43 ADGHTFVNFVSCS---YLGLDTHPAIIEGAVDALKRTGSLHLSSSRTRVRSQILKDLEEALSELF----G--A---SVLT 110 (402)
T ss_pred cCCceEEEeecCC---ccCCCCCHHHHHHHHHHHHHhCCCCCCccchhhhhHHHHHHHHHHHHHh----C--C---CEEE
Confidence 3478899998764 2234568999999999887411 11111 1123456666666665 2 2 5555
Q ss_pred eCChHHHHHHHHHHhc----CCCC-EEEEcCCCCcchH---HHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEE
Q 014936 106 TSGCTQAIDVAMALLS----RPGA-NILLPRPGFPIYE---LSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVAL 177 (415)
Q Consensus 106 ~~g~~~al~~~~~~l~----~~gd-~vi~~~p~y~~~~---~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v 177 (415)
++++++++..++..+. .+|+ .|++.+..|++.. ......+.++..+++ .|++.++++++++++++
T Consensus 111 ~~sG~~a~~~ai~~~~~~~~~~~~~~vi~~~~~~H~s~~~~~~~~~~~~~v~~~~~-------~d~~~l~~~~~~~~~~~ 183 (402)
T PRK07505 111 FTSCSAAHLGILPLLASGHLTGGVPPHMVFDKNAHASLNILKGICADETEVETIDH-------NDLDALEDICKTNKTVA 183 (402)
T ss_pred ECChHHHHHHHHHHHHhcccCCCCCCEEEEchhhhHhHHhhhhhhhcCCeEEEeCC-------CCHHHHHHHHhcCCCEE
Confidence 5566778887776543 2232 3556655554322 112223556666654 37899999887778899
Q ss_pred EecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcc-cccccC--CCCCeEEEccCccccCCCCceE
Q 014936 178 VIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFV-PMGVFG--STVPILTLGSLSKRWIVPGWRL 254 (415)
Q Consensus 178 ~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~-~~~~~~--~~~~~i~~~s~sK~~~~~G~r~ 254 (415)
++++|+||+|.+++ +++|.++|+++|+++|+||+|+...++..+.. ....++ ..++++++.|+||.|+++|
T Consensus 184 vl~~p~~~~G~~~~---~~~i~~l~~~~~~~li~DEa~~~~~~g~~g~~~~~~~~~~~~~d~~i~~~s~sK~~~~~G--- 257 (402)
T PRK07505 184 YVADGVYSMGGIAP---VKELLRLQEKYGLFLYIDDAHGLSIYGKNGEGYVRSELDYRLNERTIIAASLGKAFGASG--- 257 (402)
T ss_pred EEEecccccCCcCC---HHHHHHHHHHcCCEEEEECcccccCcCCCCCchHHHHcCCCCCCCeEEEEechhhhhccC---
Confidence 99999999999987 67777888899999999999976544322211 112223 2456899999999998877
Q ss_pred EEEEeeCCCCCCChHHHHHHHHhhcc---ccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcC
Q 014936 255 GWFVTTDPCGMFRKPKVVERMKKYFD---ILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISC 331 (415)
Q Consensus 255 G~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~ 331 (415)
||+++++ +++.+.+..... +..++++.+..++.+.++...++++.+..+.++++.+.+...+...
T Consensus 258 g~~~~~~-------~~~~~~~~~~~~~~t~~~~~~~~a~aa~~a~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~----- 325 (402)
T PRK07505 258 GVIMLGD-------AEQIELILRYAGPLAFSQSLNVAALGAILASAEIHLSEELDQLQQKLQNNIALFDSLIPTE----- 325 (402)
T ss_pred eEEEeCC-------HHHHHHHHHhCCCceeCCCCCHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHhc-----
Confidence 8876543 257777665422 1224455677777666652222344455566666655543332111
Q ss_pred CCCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCC---CCeEEEEee--CChhhHHHHHHHHHHHHH
Q 014936 332 PHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGL---KNWLRVTFA--VDPYSLEECLDRIKSFYQ 406 (415)
Q Consensus 332 ~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~---~~~iRi~~~--~~~~~l~~~l~~l~~~~~ 406 (415)
. .....++.++.++.. ....++...++ +.||.+.++..+.. .++|||++. .++++++++++.|+++++
T Consensus 326 ~-~g~~~~i~~~~~~~~-----~~~~~~~~~l~-~~Gi~v~~~~~p~~~~~~~~lRi~~~~~~t~eei~~~~~~l~~~l~ 398 (402)
T PRK07505 326 Q-SGSFLPIRLIYIGDE-----DTAIKAAKQLL-DRGFYTSPVFFPVVAKGRAGLRIMFRASHTNDEIKRLCSLLKEILD 398 (402)
T ss_pred C-CCCCCCEEEEEeCCH-----HHHHHHHHHHH-HCCCeEeeecCCCCCCCCceEEEecCccCCHHHHHHHHHHHHHHHH
Confidence 1 111112223322210 12455666664 67999998754432 268999996 699999999999998876
Q ss_pred H
Q 014936 407 R 407 (415)
Q Consensus 407 ~ 407 (415)
+
T Consensus 399 ~ 399 (402)
T PRK07505 399 E 399 (402)
T ss_pred h
Confidence 4
No 193
>PRK00451 glycine dehydrogenase subunit 1; Validated
Probab=99.94 E-value=1e-24 Score=210.08 Aligned_cols=326 Identities=19% Similarity=0.201 Sum_probs=216.0
Q ss_pred ceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCC--CCcHHHHHHHHHHH---hhhCCCCCCCCcEEEeCChH
Q 014936 36 KVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPT--AGLPLTRRAIAEYL---SRDLPYKLTPNDVFVTSGCT 110 (415)
Q Consensus 36 ~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~--~g~~~lr~~ia~~~---~~~~~~~~~~~~i~i~~g~~ 110 (415)
...+++.|.++ +..+..+.++....- ....|.+. .....+++.++++. .+..| ++.+++++++|++
T Consensus 69 ~~~~lg~g~~~----~~~p~~~~~~~~~~~---~~~~y~~~~~~~~~g~~~~~~e~~~~la~l~g--~~~~~v~~~~g~t 139 (447)
T PRK00451 69 YPSFLGAGAYD----HYIPAVVDHIISRSE---FYTAYTPYQPEISQGTLQAIFEYQTMICELTG--MDVANASMYDGAT 139 (447)
T ss_pred CcccCcccccC----CcCcHHHHHHHhchh---HHHhcCCCCCccchHHHHHHHHHHHHHHHHhC--CCcceEEecCcHH
Confidence 56788888754 444555555443321 11234330 12344665555333 55555 4566899999999
Q ss_pred HHHHHHHHHhc-CCCCEEEEcCCCCcchHHHHHh----CCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCc
Q 014936 111 QAIDVAMALLS-RPGANILLPRPGFPIYELSAAF----RHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNP 185 (415)
Q Consensus 111 ~al~~~~~~l~-~~gd~vi~~~p~y~~~~~~~~~----~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~np 185 (415)
+++..++.++. .+||+|+++.+.|+.+...++. .|.+++.++.++ + .+|++++++.++++++++++++| ||
T Consensus 140 ~~~~~~~~a~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~G~~~~~v~~~~--~-~~d~~~l~~~i~~~t~~v~l~~p-n~ 215 (447)
T PRK00451 140 ALAEAALMAVRITKRKKVLVSGAVHPEYREVLKTYLKGQGIEVVEVPYED--G-VTDLEALEAAVDDDTAAVVVQYP-NF 215 (447)
T ss_pred HHHHHHHHHHHhcCCCEEEEeCccCHHHHHHHHHHHHhCCcEEEEecCCC--C-CCCHHHHHHhcCCCeEEEEEECC-CC
Confidence 99999988874 7899999999999988776554 689999998754 3 68999999999989999999999 89
Q ss_pred cccCCCHHHHHHHHHHHhhcCcEEEE--ccccCCcccCCCCcccccccCCCCCeEEEc---cCccccCCCCceEEEEEee
Q 014936 186 CGNVYSYQHLQKLAETANKLKTLVIA--DEVYGHLVFGDKPFVPMGVFGSTVPILTLG---SLSKRWIVPGWRLGWFVTT 260 (415)
Q Consensus 186 tG~~~~~~~l~~i~~~~~~~~~~li~--De~~~~~~~~~~~~~~~~~~~~~~~~i~~~---s~sK~~~~~G~r~G~~~~~ 260 (415)
||.+ .++++|+++|+++|+++++ |.+..... . ....++.+ ++++ ++||.+.++|+++||++++
T Consensus 216 tG~v---~~l~~I~~~a~~~~~~~iv~~d~~~~g~~-----~-~~~~~~~D---~~~~s~~k~~~~~~~~Gpg~G~l~~~ 283 (447)
T PRK00451 216 FGVI---EDLEEIAEIAHAGGALFIVGVDPVSLGLL-----K-PPGEYGAD---IVVGEGQPLGIPLSFGGPYLGFFATR 283 (447)
T ss_pred CCee---CCHHHHHHHHHHCCCEEEEEcChHHhccC-----C-CcccCCCC---EEEECCCcCCCCCCCCCCCchHHHhh
Confidence 9999 5688889999999999988 54322111 0 11122222 4444 6777777889999999875
Q ss_pred CCCCCCChHHHHHHH----------------------------Hhhccc-cCCchhHHH-HHHHHhhCCCcHHHHHHHHH
Q 014936 261 DPCGMFRKPKVVERM----------------------------KKYFDI-LGDPATFIQ-AAVPSILQQPDEVFFKKTLN 310 (415)
Q Consensus 261 ~~~~~~~~~~~~~~~----------------------------~~~~~~-~~~~~~~~~-~a~~~~l~~~~~~~~~~~~~ 310 (415)
+ ++.+.+ +..... +...+...+ .++...+....+..+++..+
T Consensus 284 ~--------~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~~l~~~~~~g~~~~~~ 355 (447)
T PRK00451 284 K--------KLVRQMPGRLVGETVDADGKRGFVLTLQAREQHIRREKATSNICTNQALNALAAAIYMSLLGPEGLRELAE 355 (447)
T ss_pred H--------HHHhhCCCCEeeeecccCCCeeeEeeccccccccccccccccccccHHHHHHHHHHHHHHHCHHHHHHHHH
Confidence 4 344432 111111 111122222 33333333233577899999
Q ss_pred HHHHHHHHHHHHhhcCCCCcCCCCCCCceEEE--EecCccccCCCCCHHHHHHHHHhhcCeEE-EcCCCCC--CCCeEEE
Q 014936 311 LLKQSVDICYNKIKEIPCISCPHKPEGSMAVM--LKLNLSLLDDIIDDIDFCFKLAKEESVII-LPGTAVG--LKNWLRV 385 (415)
Q Consensus 311 ~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~--~~l~~~~~~~~~~~~~~~~~ll~~~gi~v-~~g~~~~--~~~~iRi 385 (415)
++.++++++.+.|++++++. + . .++.|.+ ++++. +..++..+|+++ ||.+ .++..+. ..+++|+
T Consensus 356 ~~~~~~~~l~~~L~~~~g~~-~-~-~~~~~~~~~v~~~~-------~~~~~~~~L~~~-gi~~~~~~~~~~~~~~~~~rv 424 (447)
T PRK00451 356 QNHQKAHYLAERLAEIGGVE-L-F-DGPFFNEFVVRLPK-------PAEEVNEALLEK-GILGGYDLGRYYPELGNHLLV 424 (447)
T ss_pred HHHHHHHHHHHHHhhcCCEE-e-c-CCCeEEEEEEecCC-------CHHHHHHHHHhc-CCCCCcccccccCCcCCEEEE
Confidence 99999999999999987887 3 2 3344433 44421 456777777654 6653 3444443 2579999
Q ss_pred Eee--CChhhHHHHHHHHHHHH
Q 014936 386 TFA--VDPYSLEECLDRIKSFY 405 (415)
Q Consensus 386 ~~~--~~~~~l~~~l~~l~~~~ 405 (415)
++. .++++++++++.|++++
T Consensus 425 s~~~~~t~e~i~~l~~~L~~~~ 446 (447)
T PRK00451 425 CVTEKRTKEDIDALVAALGEVL 446 (447)
T ss_pred ecCCCCCHHHHHHHHHHHHHHh
Confidence 994 68899999999998654
No 194
>PRK07811 cystathionine gamma-synthase; Provisional
Probab=99.94 E-value=2.9e-24 Score=201.68 Aligned_cols=225 Identities=18% Similarity=0.157 Sum_probs=166.3
Q ss_pred CCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHH----hCCCe
Q 014936 72 GYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAA----FRHIE 147 (415)
Q Consensus 72 ~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~----~~g~~ 147 (415)
+|+. ....+|++.+|++.+ .+..++++++++|+.+++.+++++||+|+++.|+|......+. ..|++
T Consensus 57 r~~~-p~~~~Le~~lA~~~g--------~~~~i~~~sG~~Ai~~~l~all~~Gd~Vl~~~~~y~~t~~~~~~~~~~~gi~ 127 (388)
T PRK07811 57 RTGN-PTRTALEEQLAALEG--------GAYGRAFSSGMAATDCLLRAVLRPGDHIVIPNDAYGGTFRLIDKVFTRWGVE 127 (388)
T ss_pred CCCC-ccHHHHHHHHHHHhC--------CCceEEeCCHHHHHHHHHHHHhCCCCEEEEcCCCchHHHHHHHHhCcCCCeE
Confidence 3444 568899999999983 2334556677999999999999999999999999996544332 35777
Q ss_pred EEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCccc
Q 014936 148 VRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVP 227 (415)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~ 227 (415)
+..++. .|++++++++++++++|++++|+||+|.+ .++++|+++|+++|+++|+|++|+..... .+
T Consensus 128 ~~~~d~-------~d~e~l~~~i~~~tklV~ie~p~NPtg~~---~dl~~I~~la~~~gi~lIvD~a~a~~~~~----~p 193 (388)
T PRK07811 128 YTPVDL-------SDLDAVRAAITPRTKLIWVETPTNPLLSI---TDIAALAELAHDAGAKVVVDNTFASPYLQ----QP 193 (388)
T ss_pred EEEeCC-------CCHHHHHHhcCcCCeEEEEECCCCCccee---cCHHHHHHHHHHcCCEEEEECCCCccccC----Cc
Confidence 766643 48999999998899999999999999988 67888999999999999999999864421 12
Q ss_pred ccccCCCCCeEEEccCccccCCCC-ceEEEEEeeCCCCCCChHHHHHHHHhhccc-cCCchhHHHHHHHHhhCCCcHHHH
Q 014936 228 MGVFGSTVPILTLGSLSKRWIVPG-WRLGWFVTTDPCGMFRKPKVVERMKKYFDI-LGDPATFIQAAVPSILQQPDEVFF 305 (415)
Q Consensus 228 ~~~~~~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~a~~~~l~~~~~~~~ 305 (415)
+. .+.+ +++.|++|.++.+| .+.||++++++ ++.+.++..... ....++.....+...|+. +
T Consensus 194 ~~-~gaD---ivv~S~sK~l~g~~~~~gG~vv~~~~-------~l~~~~~~~~~~~g~~~s~~~a~l~~~~L~t-----l 257 (388)
T PRK07811 194 LA-LGAD---VVVHSTTKYIGGHSDVVGGALVTNDE-------ELDEAFAFLQNGAGAVPGPFDAYLTLRGLKT-----L 257 (388)
T ss_pred hh-hCCc---EEEecCceeecCCCCcEEEEEEECCH-------HHHHHHHHHHHhcCCCCCHHHHHHHHhccCc-----H
Confidence 21 2222 88999999988754 57899887642 465655544332 334455555555555543 6
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCCCcCCCCC
Q 014936 306 KKTLNLLKQSVDICYNKIKEIPCISCPHKP 335 (415)
Q Consensus 306 ~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p 335 (415)
..+.++..++...+.+.|+..|++..+.+|
T Consensus 258 ~~R~~~~~~na~~la~~L~~~p~v~~V~yP 287 (388)
T PRK07811 258 AVRMDRHSENAEAVAEFLAGHPEVSTVLYP 287 (388)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCeeEEECC
Confidence 677788888999999999988776544444
No 195
>PRK07503 methionine gamma-lyase; Provisional
Probab=99.94 E-value=3e-24 Score=202.37 Aligned_cols=226 Identities=18% Similarity=0.205 Sum_probs=167.3
Q ss_pred CCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchH----HHHHhCC
Q 014936 70 FNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYE----LSAAFRH 145 (415)
Q Consensus 70 ~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~----~~~~~~g 145 (415)
+.+|+. +...+|++.++++.+ .+..+++++|++++.+++.+++++||+|+++.|+|.... ..+...|
T Consensus 59 y~r~~~-p~~~~le~~lA~l~g--------~~~~i~~~sG~~Al~~~l~~ll~~Gd~Viv~~~~y~~t~~~~~~~~~~~G 129 (403)
T PRK07503 59 YSRISN-PTLALLEQRMASLEG--------GEAAVALASGMGAITATLWTLLRPGDEVIVDQTLYGCTFAFLHHGLGEFG 129 (403)
T ss_pred eeCCCC-chHHHHHHHHHHHhC--------CCcEEEEcCHHHHHHHHHHHHcCCCCEEEEccCccchHHHHHHHHHhhCC
Confidence 345555 357899999999872 234677778899999999999999999999999997643 3455688
Q ss_pred CeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCc
Q 014936 146 IEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPF 225 (415)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~ 225 (415)
+++..++. .|++.+++++++++++|++++|+||+|.+.+ +++|+++|+++|+++|+|++|+.....
T Consensus 130 ~~v~~vd~-------~d~~~l~~~i~~~tklV~le~p~NPtG~~~d---i~~I~~la~~~gi~lIvD~a~a~~~~~---- 195 (403)
T PRK07503 130 VTVRHVDL-------TDPAALKAAISDKTRMVYFETPANPNMRLVD---IAAVAEIAHGAGAKVVVDNTYCTPYLQ---- 195 (403)
T ss_pred EEEEEeCC-------CCHHHHHHhcCccCcEEEEeCCCCCCCeeeC---HHHHHHHHHHcCCEEEEECCCcccccC----
Confidence 88888765 2789999999889999999999999999954 788888889999999999999864321
Q ss_pred ccccccCCCCCeEEEccCccccCCCC-ceEEEEEeeCCCCCCChHHHHHHHHhh--cc-ccCCchhHHHHHHHHhhCCCc
Q 014936 226 VPMGVFGSTVPILTLGSLSKRWIVPG-WRLGWFVTTDPCGMFRKPKVVERMKKY--FD-ILGDPATFIQAAVPSILQQPD 301 (415)
Q Consensus 226 ~~~~~~~~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~--~~-~~~~~~~~~~~a~~~~l~~~~ 301 (415)
.++ .++. .+++.|+||.++.+| .+.|+++.++ +++++++.. .. .....++..+..+...|+.
T Consensus 196 ~~l-~~g~---Di~v~S~tK~l~g~gd~~gG~v~~~~--------~l~~~l~~~~~~~~~g~~~s~~~a~l~l~~L~t-- 261 (403)
T PRK07503 196 RPL-ELGA---DLVVHSATKYLGGHGDITAGLVVGGK--------ALADRIRLEGLKDMTGAVMSPFDAFLLMRGLKT-- 261 (403)
T ss_pred Cch-hhCC---CEEEccccccccCCCceeEEEEEcCH--------HHHHHHHhhhHHhCcCCCCCHHHHHHHHcCcch--
Confidence 122 1222 288999999988765 7788887533 576766532 22 2345666666666555543
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCC
Q 014936 302 EVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKP 335 (415)
Q Consensus 302 ~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p 335 (415)
+..+.++..++...+.+.|+..|.+..+.+|
T Consensus 262 ---l~~r~~~~~~na~~~a~~L~~~p~v~~V~~P 292 (403)
T PRK07503 262 ---LALRMDRHCASAQAVAEWLARHPAVELVHYP 292 (403)
T ss_pred ---HHHHHHHHHHHHHHHHHHHHhCCCccEEECC
Confidence 6666677778888888899887765534333
No 196
>TIGR01328 met_gam_lyase methionine gamma-lyase. This model describes a methionine gamma-lyase subset of a family of PLP-dependent trans-sulfuration enzymes. The member from the parasite Trichomonas vaginalis is described as catalyzing alpha gamma- and alpha-beta eliminations and gamma-replacement reactions on methionine, cysteine, and some derivatives. Likewise, the enzyme from Pseudomonas degrades cysteine as well as methionine.
Probab=99.94 E-value=4.9e-24 Score=200.20 Aligned_cols=226 Identities=13% Similarity=0.144 Sum_probs=167.3
Q ss_pred CCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchH----HHHHhCC
Q 014936 70 FNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYE----LSAAFRH 145 (415)
Q Consensus 70 ~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~----~~~~~~g 145 (415)
+.+|+++ ...+|++.+|++.+ .+..+++++|++++..++.+++++||+|+++.|.|.... ..+...|
T Consensus 53 y~r~~~p-~~~~le~~lA~l~g--------~~~av~~~sG~~Ai~~~l~al~~~Gd~Vi~~~~~y~~t~~~~~~~~~~~G 123 (391)
T TIGR01328 53 YSRLGNP-TVSNLEGRIAFLEG--------TEAAVATSSGMGAIAATLLTILKAGDHLISDECLYGCTFALLEHALTKFG 123 (391)
T ss_pred eeCCCCc-hHHHHHHHHHHHhC--------CCcEEEECCHHHHHHHHHHHHhCCCCEEEEecCcchHHHHHHHHHHhcCC
Confidence 4456654 56889999999983 345788888899999999999999999999999887543 3445678
Q ss_pred CeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCc
Q 014936 146 IEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPF 225 (415)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~ 225 (415)
+++..++.+ |++++++++++++++|++++|+||+|.+.+ +++|+++|+++|+++|+|++|+.....
T Consensus 124 ~~~~~vd~~-------d~e~l~~~i~~~tklV~le~p~Np~G~v~d---l~~I~~la~~~gi~livD~a~a~~~~~---- 189 (391)
T TIGR01328 124 IQVDFINMA-------IPEEVKAHIKDNTKIVYFETPANPTMKLID---MERVCRDAHSQGVKVIVDNTFATPMLT---- 189 (391)
T ss_pred eEEEEECCC-------CHHHHHHhhccCCeEEEEECCCCCCCcccC---HHHHHHHHHHcCCEEEEECCCchhccC----
Confidence 888887652 789999999889999999999999999965 777888888999999999999864331
Q ss_pred ccccccCCCCCeEEEccCccccCCCCceE-EEEEeeCCCCCCChHHHHHHHHhhc--c-ccCCchhHHHHHHHHhhCCCc
Q 014936 226 VPMGVFGSTVPILTLGSLSKRWIVPGWRL-GWFVTTDPCGMFRKPKVVERMKKYF--D-ILGDPATFIQAAVPSILQQPD 301 (415)
Q Consensus 226 ~~~~~~~~~~~~i~~~s~sK~~~~~G~r~-G~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~a~~~~l~~~~ 301 (415)
.++ ....+ +++.|++|.++.+|.++ |++++++ ++++.++... . .....++.....+...|+.
T Consensus 190 ~~~-~~g~D---ivv~S~sK~lgg~g~~~gG~v~~~~--------~li~~l~~~~~~~~~g~~l~~~~a~l~l~~L~t-- 255 (391)
T TIGR01328 190 NPV-ALGVD---VVVHSATKYIGGHGDVVAGLICGKA--------ELLQQIRMVGIKDMTGSVISPFDAWLILRGLKT-- 255 (391)
T ss_pred Cch-hcCCC---EEEccccccccCCCCceEEEEEcCH--------HHHHHHHHHHHHhCCCCCCCcHHHHHHHhCcCc--
Confidence 122 12222 78899999999888875 5554432 5666666432 1 1234555555555555543
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCC
Q 014936 302 EVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKP 335 (415)
Q Consensus 302 ~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p 335 (415)
+..+.++..++...+.+.|+..|++..+.+|
T Consensus 256 ---l~~r~~~~~~na~~la~~L~~~p~v~~v~yp 286 (391)
T TIGR01328 256 ---LNIRMKRHSENAMKVAEYLKSHPAVEKVYYP 286 (391)
T ss_pred ---HHHHHHHHHHHHHHHHHHHHhCCCccEEECC
Confidence 5667788888999999999988776544444
No 197
>PRK06460 hypothetical protein; Provisional
Probab=99.94 E-value=3.4e-24 Score=200.37 Aligned_cols=224 Identities=15% Similarity=0.102 Sum_probs=159.8
Q ss_pred CCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCc----chHHHHHhCCCe
Q 014936 72 GYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFP----IYELSAAFRHIE 147 (415)
Q Consensus 72 ~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~----~~~~~~~~~g~~ 147 (415)
++.+ ....+|++.+|++.+ .. ..+ ++++|++++..++.+++++||+|+++.|.|. .+...++..|++
T Consensus 41 r~~~-p~~~~L~~~lA~l~g------~~-~~v-~~~sG~~ai~~~l~al~~~Gd~Vl~~~~~~~~ty~~~~~~~~~~G~~ 111 (376)
T PRK06460 41 REAN-PTVLELTKKIVELEN------AE-MGV-AFSSGMGAISTTALALLKPGNSVLVHRDMFGRSYRFFTDYLKNWGVN 111 (376)
T ss_pred CCCC-ccHHHHHHHHHHHhC------CC-cEE-EeCCHHHHHHHHHHHHhCCCCEEEEecCCcCcHHHHHHHHHHhhCcE
Confidence 3344 577999999999983 22 344 4466679999999999999999999987654 445667888999
Q ss_pred EEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCccc
Q 014936 148 VRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVP 227 (415)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~ 227 (415)
+..++.+ +.+.+++.+++++++|++++|+||||.+++. ++|+++|+++|+++|+|++|+... . ..+
T Consensus 112 v~~~~~~-------~~~~l~~~~~~~tklV~l~sp~NPtG~v~d~---~~I~~la~~~g~~vivDea~~~~~-~---~~~ 177 (376)
T PRK06460 112 VDASNPG-------SDNIIEKAKSKRYDVVFVENITNPLLRVVDI---TELSKVCKENGSILIVDATFSTPI-N---QKP 177 (376)
T ss_pred EEEECCC-------CHHHHHHhcCCCceEEEEECCCCCCCcccCH---HHHHHHHHHcCCEEEEECCcCccc-c---CCh
Confidence 8877642 2244555556789999999999999999875 467788889999999999997532 1 111
Q ss_pred ccccCCCCCeEEEccCccccCCC-CceEEEEEeeCCCCCCChHHHHHHHHhhcc-ccCCchhHHHHHHHHhhCCCcHHHH
Q 014936 228 MGVFGSTVPILTLGSLSKRWIVP-GWRLGWFVTTDPCGMFRKPKVVERMKKYFD-ILGDPATFIQAAVPSILQQPDEVFF 305 (415)
Q Consensus 228 ~~~~~~~~~~i~~~s~sK~~~~~-G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~ 305 (415)
+ .. +..+++.|+||.|+.. +.++||+++++ ++++.++.... .+.+.++.. +..+++. .+++
T Consensus 178 l-~~---~~divv~S~sK~l~G~~~~~~G~~~~~~--------~l~~~l~~~~~~~g~~~~~~~---a~~~l~~--~~~l 240 (376)
T PRK06460 178 L-EL---GADIVVHSASKFLAGHNDVIAGLAAGYG--------KLLNVIDQMRRTLGTSLDPHA---AYLTLRG--IKTL 240 (376)
T ss_pred h-hc---CCCEEEeecceeccCCCCceEEEEecCH--------HHHHHHHHHHHhcCCCCCHHH---HHHHHhc--hhhH
Confidence 1 11 2348899999997533 37899998754 67777765533 233334432 2233332 3678
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCCCcCCCCC
Q 014936 306 KKTLNLLKQSVDICYNKIKEIPCISCPHKP 335 (415)
Q Consensus 306 ~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p 335 (415)
+.+++++.++++.+.+.|++.|.+..+.+|
T Consensus 241 ~~r~~~~~~n~~~l~~~L~~~p~v~~v~yp 270 (376)
T PRK06460 241 KIRMDVINRNAEQIAEFLEGHPKVVKVYYP 270 (376)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCccEEECC
Confidence 889999999999999999988776544454
No 198
>TIGR03246 arg_catab_astC succinylornithine transaminase family. Members of the seed alignment for this protein family are the enzyme succinylornithine transaminase (EC 2.6.1.81), which catalyzes the third of five steps in arginine succinyltransferase (AST) pathway, an ammonia-releasing pathway of arginine degradation. All seed alignment sequences are found within arginine succinyltransferase operons, and all proteins that score above 820.0 bits should function as succinylornithine transaminase. However, a number of sequences extremely closely related in sequence, found in different genomic contexts, are likely to act in different biological processes and may act on different substrates. This model is desigated subfamily rather than equivalog, pending further consideration, for this reason.
Probab=99.94 E-value=5e-24 Score=201.50 Aligned_cols=334 Identities=18% Similarity=0.160 Sum_probs=218.0
Q ss_pred cCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCC--CCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChH
Q 014936 33 NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKF--NGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCT 110 (415)
Q Consensus 33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~--~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~ 110 (415)
+++.++||..|.-....+. .+|.+.+++.+++..... ..|+. ....+|.+.++++. ..+.++++++|+
T Consensus 33 dG~~ylD~~~g~~~~~lGh-~~p~v~~a~~~~~~~~~~~~~~~~~-~~~~~la~~L~~~~--------~~~~~~f~~SGs 102 (397)
T TIGR03246 33 QGKEYIDFAGGIAVNALGH-AHPELVKALIEQADKLWHIGNGYTN-EPVLRLAKKLVDAT--------FADKVFFCNSGA 102 (397)
T ss_pred CCCEEEECCcCHhhccCCC-CCHHHHHHHHHHHHhcccccCccCC-HHHHHHHHHHHhhC--------CCCEEEEeCCcH
Confidence 4788999988742222233 489999999998875221 12221 22345555555543 246999999999
Q ss_pred HHHHHHHHHhc-------CCC-CEEEEcCCCCcchHHHHHh-CCC------------eEEEeeccCCCCCCCChhHHHhh
Q 014936 111 QAIDVAMALLS-------RPG-ANILLPRPGFPIYELSAAF-RHI------------EVRHFDLLPDKGWEVDLDDIESL 169 (415)
Q Consensus 111 ~al~~~~~~l~-------~~g-d~vi~~~p~y~~~~~~~~~-~g~------------~~~~~~~~~~~~~~~~~~~l~~~ 169 (415)
+|+..+++... ++| +.|+..+-+|++....+.. .+. .+..++. .|++.+++.
T Consensus 103 eA~e~Alk~ar~~~~~~~~~~r~~ii~~~~~yHG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~~ 175 (397)
T TIGR03246 103 EANEAALKLARRYALDKHGADKSEIVAFKNSFHGRTLFTVSVGGQPKYSQGFAPLPGGIKHAPY-------NDLAAAKAL 175 (397)
T ss_pred HHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHHhcCCcccccCCCCCCCceEEeCC-------CCHHHHHHH
Confidence 99999999862 122 5678888788776544332 221 1111211 378999999
Q ss_pred cCCCceEEEecCCCCccccC-CCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccC
Q 014936 170 ADQNTVALVIINPGNPCGNV-YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWI 248 (415)
Q Consensus 170 ~~~~~~~v~i~~p~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~ 248 (415)
+.+++.+|++..++++.|.. .+.+.+++|.++|++||+++|+||+|.++...|... ....++.... +.++||.++
T Consensus 176 l~~~~aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tG~Gr~G~~~-a~~~~gv~pD---i~t~~K~lg 251 (397)
T TIGR03246 176 ISDKTCAVIVEPIQGEGGVVPADPAFLKGLRELCDRHNALLIFDEVQTGVGRTGELY-AYMHYGVTPD---ILTSAKALG 251 (397)
T ss_pred hccCeEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhcCCccccch-hhhhcCCCCC---EEEeehhhh
Confidence 87776666665445566655 388999999999999999999999998776555432 1122222222 337899975
Q ss_pred CCCceEEEEEeeCCCCCCChHHHHHHHHhhc-cccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCC
Q 014936 249 VPGWRLGWFVTTDPCGMFRKPKVVERMKKYF-DILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIP 327 (415)
Q Consensus 249 ~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~ 327 (415)
+|+++||+++++ ++.+.+.... ..+++.+++.+.++.+.|+... -++..++++++.+++.+.|+++.
T Consensus 252 -gG~pigav~~~~--------~i~~~~~~~~~~~t~~~~p~~~aaa~a~l~~~~---~~~l~~~~~~~~~~l~~~L~~l~ 319 (397)
T TIGR03246 252 -GGFPIGAMLTTT--------EIAAHLKVGTHGTTYGGNPLACAVAGKVLDLVN---TPELLAGVKQRHDLFVDGLEKIN 319 (397)
T ss_pred -CCcceeEEEEcH--------HHHHhccCCCcCCCCCCCHHHHHHHHHHHHHHh---hccHHHHHHHHHHHHHHHHHHHH
Confidence 789999999975 5777765432 2345678888888888886421 23566778888888888887652
Q ss_pred C-CcCC-CCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEe--eCChhhHHHHHHHHHH
Q 014936 328 C-ISCP-HKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTF--AVDPYSLEECLDRIKS 403 (415)
Q Consensus 328 ~-~~~~-~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~--~~~~~~l~~~l~~l~~ 403 (415)
. ...+ ..+..|.++.+.+.... ......++..+ .++||.+.+.. .+++|+++ ..+++++++++++|.+
T Consensus 320 ~~~~~~~~vrg~G~~~~i~~~~~~---~~~~~~~~~~l-~~~Gv~~~~~g----~~~lR~~p~~~~t~~~i~~~~~~l~~ 391 (397)
T TIGR03246 320 ARYNVFSEIRGKGLLIGAVLTEAY---QGKAKQFVNAA-AEEGVIALIAG----PNVVRFAPSLVISDDDIDEGLARFER 391 (397)
T ss_pred hcCCCeEeeecCceEEEEEEcCch---hhHHHHHHHHH-HHCCeEEeecC----CCEEEEeCCCCCCHHHHHHHHHHHHH
Confidence 1 1111 12334555555553210 01245566655 56699987632 37899966 5789999999999998
Q ss_pred HHHH
Q 014936 404 FYQR 407 (415)
Q Consensus 404 ~~~~ 407 (415)
++.+
T Consensus 392 ~l~~ 395 (397)
T TIGR03246 392 AIEQ 395 (397)
T ss_pred HHHH
Confidence 8865
No 199
>PRK05937 8-amino-7-oxononanoate synthase; Provisional
Probab=99.94 E-value=5.2e-24 Score=199.92 Aligned_cols=327 Identities=16% Similarity=0.111 Sum_probs=207.1
Q ss_pred CcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcC-------CCCCCC------CCCCcHHHHHHHHHHHhhhCCCCCCC
Q 014936 34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSE-------KFNGYA------PTAGLPLTRRAIAEYLSRDLPYKLTP 100 (415)
Q Consensus 34 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~-------~~~~y~------~~~g~~~lr~~ia~~~~~~~~~~~~~ 100 (415)
+..+++|++++ +.++..++.+++++.+++... .....+ ...-+.++|+.+|++++ . +
T Consensus 3 ~~~~~~~~s~~---YL~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~gs~~~~g~~~~~~~~e~~la~~~~------~-~ 72 (370)
T PRK05937 3 ESLSIDFVTND---FLGFSRSDTLVHEVEKRYRLYCRQFPHAQLGYGGSRAILGPSSLLDDLEHKIAHFHG------A-P 72 (370)
T ss_pred CCceEEeECCC---ccCCCCCHHHHHHHHHHHHHhccccCCCCCCCCCcCcccCChHHHHHHHHHHHHHhC------C-C
Confidence 45689999999 777888888988888876542 111111 22346788888999883 2 3
Q ss_pred CcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCC------Cc
Q 014936 101 NDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ------NT 174 (415)
Q Consensus 101 ~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~------~~ 174 (415)
+.+++++| +.++..++..+.++||.|+++.-.|.+....++........+++ .|+++|++.+++ .+
T Consensus 73 ~~l~~~sG-~~a~~~~~~~~~~~~d~ii~d~~~H~sv~~~~~~~~~~~~~~~~-------~d~~~l~~~l~~~~~~~~~~ 144 (370)
T PRK05937 73 EAFIVPSG-YMANLGLCAHLSSVTDYVLWDEQVHISVVYSLSVISGWHQSFRH-------NDLDHLESLLESCRQRSFGR 144 (370)
T ss_pred eEEEECCh-HHHHHHHHHHhCCCCCEEEEEhhhhHHHHHHHHHcCCceEEecC-------CCHHHHHHHHHhhhccCCCc
Confidence 34555555 45666666666678899999899998888777665433333432 578988887752 35
Q ss_pred eEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceE
Q 014936 175 VALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRL 254 (415)
Q Consensus 175 ~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~ 254 (415)
.++++++++|++|.+.| +++|+++|+++|+++++|++|+.+.++.........+...+..+.+.||||.++..|
T Consensus 145 ~~v~v~~v~s~~G~i~p---l~eI~~l~~~~~~~livDea~~~G~~g~~g~g~~~~~~~~~~~~~~~tlsK~~g~~G--- 218 (370)
T PRK05937 145 IFIFVCSVYSFKGTLAP---LEQIIALSKKYHAHLIVDEAHAMGIFGDDGKGFCHSLGYENFYAVLVTYSKALGSMG--- 218 (370)
T ss_pred EEEEEecCCCCCCCccC---HHHHHHHHHHcCCEEEEECCccccccCCCCCchHHhhCCCCCcEEEEechhhhhcCc---
Confidence 56678899999999976 778888888999999999999975544222111111222222366789999998877
Q ss_pred EEEEeeCCCCCCChHHHHHHHHhh---ccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcC
Q 014936 255 GWFVTTDPCGMFRKPKVVERMKKY---FDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISC 331 (415)
Q Consensus 255 G~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~ 331 (415)
+.++..+ +..+.+... ..+..+.++....++.++++...+. .+..+++++++++++.+.|... +
T Consensus 219 ~~vl~~~--------~~~~~~~~~~~~~~~s~~~~~~~~~a~~aal~~l~~~-~~~~~~~l~~l~~~l~~~l~~~-~--- 285 (370)
T PRK05937 219 AALLSSS--------EVKQDLMLNSPPLRYSTGLPPHLLISIQVAYDFLSQE-GELARKQLFRLKEYFAQKFSSA-A--- 285 (370)
T ss_pred eEEEcCH--------HHHHHHHHhCCCCeecCCCCHHHHHHHHHHHHHHHhC-cHHHHHHHHHHHHHHHHhcCCC-C---
Confidence 3334322 344443321 1223445666666555555432111 2345677788888888777542 1
Q ss_pred CCCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEee--CChhhHHHHHHHHHHHHHHHH
Q 014936 332 PHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFA--VDPYSLEECLDRIKSFYQRHA 409 (415)
Q Consensus 332 ~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~--~~~~~l~~~l~~l~~~~~~~~ 409 (415)
+..... +.++. .....+ ...|.++||.+.... +...+++|++++ ++++|++.+++.|.++++++-
T Consensus 286 ---~~~~~~--i~~~~------~~~~~~-~~~L~~~gi~v~~~~-~~~~~~iRis~~~~~t~edid~l~~~L~~~~~~~~ 352 (370)
T PRK05937 286 ---PGCVQP--IFLPG------ISEQEL-YSKLVETGIRVGVVC-FPTGPFLRVNLHAFNTEDEVDILVSVLATYLEKYQ 352 (370)
T ss_pred ---CCCEEE--EEeCC------hhHHHH-HHHHHHCCeeEEeeC-CCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHhC
Confidence 111111 22332 123444 444577799886422 122578999995 789999999999999887754
Q ss_pred H
Q 014936 410 K 410 (415)
Q Consensus 410 ~ 410 (415)
+
T Consensus 353 ~ 353 (370)
T PRK05937 353 K 353 (370)
T ss_pred C
Confidence 3
No 200
>TIGR01325 O_suc_HS_sulf O-succinylhomoserine sulfhydrylase. This model describes O-succinylhomoserine sulfhydrylase, one of several related pyridoxal phosphate-dependent enzymes of cysteine and methionine metabolism. This enzyme is part of an alternative pathway of homocysteine biosynthesis, a step in methionine biosynthesis.
Probab=99.94 E-value=6.5e-24 Score=199.12 Aligned_cols=226 Identities=20% Similarity=0.241 Sum_probs=168.6
Q ss_pred CCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchH----HHHHhCC
Q 014936 70 FNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYE----LSAAFRH 145 (415)
Q Consensus 70 ~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~----~~~~~~g 145 (415)
+.+|++ ....++++.+++++ ..+.+++++||++++..++.+++++||+|+++.+.|.+.. ..+...|
T Consensus 48 y~r~~~-p~~~~le~~la~l~--------g~~~~~~~~sG~~Ai~~al~al~~~Gd~Vl~~~~~~~~t~~~~~~~~~~~g 118 (380)
T TIGR01325 48 YSRYAN-PTVAAFEERIAALE--------GAERAVATATGMSAIQAALMTLLQAGDHVVASRSLFGSTVGFISEILPRFG 118 (380)
T ss_pred eecCCC-chHHHHHHHHHHHh--------CCCcEEEECCHHHHHHHHHHHHhCCCCEEEEecCCcchHHHHHHHHHHHhC
Confidence 345665 35789999999987 2357889999999999999999999999999999887633 3566789
Q ss_pred CeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCc
Q 014936 146 IEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPF 225 (415)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~ 225 (415)
+++..++. .|++.+++++++++++|++++|+||+|.+. ++++|+++|+++|+++|+|++|+...+. .
T Consensus 119 ~~v~~v~~-------~d~~~l~~~i~~~tklV~le~p~np~g~~~---dl~~I~~la~~~gi~livD~a~~~~~~~--~- 185 (380)
T TIGR01325 119 IEVSFVDP-------TDLNAWEAAVKPNTKLVFVETPSNPLGELV---DIAALAELAHAIGALLVVDNVFATPVLQ--Q- 185 (380)
T ss_pred CEEEEECC-------CCHHHHHHhcCCCceEEEEECCCCCCCeee---CHHHHHHHHHHcCCEEEEECCCcccccC--C-
Confidence 99888764 268999999988899999999999999995 5788888889999999999999864322 1
Q ss_pred ccccccCCCCCeEEEccCccccCCCCceE-EEEEeeCCCCCCChHHHHHHHHhhc-cccCCchhHHHHHHHHhhCCCcHH
Q 014936 226 VPMGVFGSTVPILTLGSLSKRWIVPGWRL-GWFVTTDPCGMFRKPKVVERMKKYF-DILGDPATFIQAAVPSILQQPDEV 303 (415)
Q Consensus 226 ~~~~~~~~~~~~i~~~s~sK~~~~~G~r~-G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~a~~~~l~~~~~~ 303 (415)
++ .++. .+++.|++|.++.+|.++ |++++++ ++++.++... ......++....++...++
T Consensus 186 -pl-~~g~---Divv~S~sK~l~g~g~~~gG~vv~~~--------~~~~~l~~~~~~~g~~~~p~~a~~~l~~l~----- 247 (380)
T TIGR01325 186 -PL-KLGA---DVVVYSATKHIDGQGRVMGGVIAGSE--------ELMAEVAVYLRHTGPAMSPFNAWVLLKGLE----- 247 (380)
T ss_pred -ch-hhCC---CEEEeeccceecCCCCeEEEEEEeCH--------HHHHHHHHHHHhhCCCCCHHHHHHHHhccC-----
Confidence 22 2233 277889999998888887 5555543 4666666543 2233445555444444443
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCC
Q 014936 304 FFKKTLNLLKQSVDICYNKIKEIPCISCPHKP 335 (415)
Q Consensus 304 ~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p 335 (415)
.+..+.++..+++..+.+.|+++|.+..+.+|
T Consensus 248 tl~~r~~~~~~~a~~la~~L~~~p~v~~V~yp 279 (380)
T TIGR01325 248 TLSLRMQKQFDSALAIAEWLQAQPQVQAVYYP 279 (380)
T ss_pred cHHHHHHHHHHHHHHHHHHHHcCCCccEEECC
Confidence 36667888888999999999988776544444
No 201
>PLN00144 acetylornithine transaminase
Probab=99.94 E-value=4.1e-24 Score=200.43 Aligned_cols=342 Identities=15% Similarity=0.129 Sum_probs=219.0
Q ss_pred ccCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHH
Q 014936 32 KNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQ 111 (415)
Q Consensus 32 ~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~ 111 (415)
.+++.++|+..|.-.... --.+|++.+++++++..... +.. ....+....+|+.+.+.. ..+.++++++|++
T Consensus 12 ~dG~~ylD~~~g~~~~~l-Gh~~p~v~~ai~~q~~~~~~--~~~-~~~~~~~~~la~~l~~~~----~~~~v~f~~sGse 83 (382)
T PLN00144 12 VEGKEYLDMAAGIAVNAL-GHGDPDWVKAVAEQAGTLAH--VSN-VYHTIPQVELAKRLVASS----FADRVFFCNSGTE 83 (382)
T ss_pred CCCCEEEECCcCHHhccC-CCCCHHHHHHHHHHHHhcCC--ccc-cccCHHHHHHHHHHHhcC----CCCeEEEeCCcHH
Confidence 358899999877522111 12479999999999875322 111 112344455555554321 2469999999999
Q ss_pred HHHHHHHHhc---C-C-----------CCEEEEcCCCCcchHHHHHhCCCeEE----EeeccCCCC--CCCChhHHHhhc
Q 014936 112 AIDVAMALLS---R-P-----------GANILLPRPGFPIYELSAAFRHIEVR----HFDLLPDKG--WEVDLDDIESLA 170 (415)
Q Consensus 112 al~~~~~~l~---~-~-----------gd~vi~~~p~y~~~~~~~~~~g~~~~----~~~~~~~~~--~~~~~~~l~~~~ 170 (415)
|++.+++... + + ..+|+....+|++....+........ ..+..+... ...|++.+++.+
T Consensus 84 A~e~AlklAr~~~~~~~~~~~~~~~~~r~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~ 163 (382)
T PLN00144 84 ANEAAIKFARKYQRVRAPDKKDPAASSATEFVSFSNSFHGRTLGALALTSKEQYRTPFEPLMPGVTFVEYGNLEAARKLI 163 (382)
T ss_pred HHHHHHHHHHHHHhccCCCCccccccccceEEEECCCcccccHHHHhcCCCccccccCCCCCCCeEEeCCCCHHHHHHhc
Confidence 9999998753 1 0 24799999999987665544322110 011000000 012689999888
Q ss_pred CCCceEEEecCC-CCccccC-CCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCccc-ccccCCCCCeEEEccCcccc
Q 014936 171 DQNTVALVIINP-GNPCGNV-YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVP-MGVFGSTVPILTLGSLSKRW 247 (415)
Q Consensus 171 ~~~~~~v~i~~p-~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~-~~~~~~~~~~i~~~s~sK~~ 247 (415)
.....+.+++.| +||.|.. ++.+.+++|.++|++||+++|+||+|.++...+..... ...+.++ +.||||.+
T Consensus 164 ~~~~~aavi~eP~q~~gg~~~~~~~~~~~l~~l~~~~g~llI~DEv~tg~gr~g~~~~~~~~~~~PD-----i~t~sK~l 238 (382)
T PLN00144 164 QKGKTAAVFVEPVQGEGGIYPATKEFLQGLRALCDEAGALLVFDEVQCGLGRTGYLWAHEAYGVEPD-----IMTLAKPL 238 (382)
T ss_pred CCCCeEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchHhhhhhcCCCCC-----EEEecccc
Confidence 654455566666 7885543 34555999999999999999999999988776653221 3334433 55889994
Q ss_pred CCCCceEEEEEeeCCCCCCChHHHHHHHHhh-ccccCCchhHHHHHHHHhhCCCcH-HHHHHHHHHHHHHHHHHHHHhhc
Q 014936 248 IVPGWRLGWFVTTDPCGMFRKPKVVERMKKY-FDILGDPATFIQAAVPSILQQPDE-VFFKKTLNLLKQSVDICYNKIKE 325 (415)
Q Consensus 248 ~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~a~~~~l~~~~~-~~~~~~~~~~~~~~~~l~~~l~~ 325 (415)
.+|+|+||+++++ ++.+.+... ...++..+++.+.++.+.|+...+ +..++..+.-+..++.+.+.+.+
T Consensus 239 -~~G~pig~v~~~~--------~~~~~~~~~~~~~T~~~~pl~~aaa~a~l~~i~~~~~~~~~~~~g~~l~~~l~~~~~~ 309 (382)
T PLN00144 239 -AGGLPIGAVLVTE--------KVASAINPGDHGSTFAGGPLVCNAALAVLDKISKPGFLASVAKKGEYLRELLRRKLGG 309 (382)
T ss_pred -cCCcceEEEEEcH--------HHHhccCCCCCCCCCCCCHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHhh
Confidence 6789999999975 577666543 334567889999888855543221 22222222222223444444555
Q ss_pred CCCCcCCCCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEee--CChhhHHHHHHHHHH
Q 014936 326 IPCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFA--VDPYSLEECLDRIKS 403 (415)
Q Consensus 326 ~~~~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~--~~~~~l~~~l~~l~~ 403 (415)
.|.+.. ....|+++|+.+.. ....+...+ .++||.+.|+.. .+.||++++ .+++++++++++|.+
T Consensus 310 ~~~~~~--vrg~G~~~~l~l~~-------~~~~~~~~~-~~~Gv~i~~~~~---~~~lrl~p~~~~~~~~i~~~~~~l~~ 376 (382)
T PLN00144 310 NPHVKE--VRGVGLLVGIQLDV-------PAGPLVDAC-RDSGLLVLTAGK---GDVVRLVPPLVISEAELEQAVEILAD 376 (382)
T ss_pred CCCcee--eecCceEEEEEecC-------ccHHHHHHH-HHCCeEEeecCC---CCEEEEeCCCccCHHHHHHHHHHHHH
Confidence 544431 23479999999842 245565554 567999988732 479999994 678999999999999
Q ss_pred HHHHH
Q 014936 404 FYQRH 408 (415)
Q Consensus 404 ~~~~~ 408 (415)
++.++
T Consensus 377 ~l~~~ 381 (382)
T PLN00144 377 CLPAL 381 (382)
T ss_pred HHHhc
Confidence 98753
No 202
>PLN02651 cysteine desulfurase
Probab=99.94 E-value=3.1e-24 Score=201.35 Aligned_cols=314 Identities=15% Similarity=0.127 Sum_probs=212.2
Q ss_pred CCCcHHHHHHHHHHHhcCCCCCC------CC--CCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHh--
Q 014936 51 FHTTHVATEAVAEALLSEKFNGY------AP--TAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALL-- 120 (415)
Q Consensus 51 ~~~~~~~~~a~~~~~~~~~~~~y------~~--~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l-- 120 (415)
.++++.+.+++.+.+.....+.. .. ..-..++|+.+++++ +.++++|++++|++++++.++..+
T Consensus 9 ~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~------g~~~~~v~~t~~~t~a~~~~l~~~~~ 82 (364)
T PLN02651 9 TPIDPRVLDAMLPFLIEHFGNPHSRTHLYGWESEDAVEKARAQVAALI------GADPKEIIFTSGATESNNLAIKGVMH 82 (364)
T ss_pred CCCCHHHHHHHHHHHHhCCCCCChhhhHHHHHHHHHHHHHHHHHHHHh------CCCCCeEEEeCCHHHHHHHHHHHHHH
Confidence 35678899999887653211111 00 112456677777777 457789999999999988887664
Q ss_pred --cCCCCEEEEcCCCCcchHHH---HHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHH
Q 014936 121 --SRPGANILLPRPGFPIYELS---AAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHL 195 (415)
Q Consensus 121 --~~~gd~vi~~~p~y~~~~~~---~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l 195 (415)
.++||+|++....|+++... +...|+++..++.+ .++.+|+++++++++++++++++++++|+||.+.| +
T Consensus 83 ~~~~~g~~vl~~~~~h~s~~~~~~~~~~~g~~v~~v~~~--~~~~~d~~~l~~~i~~~t~lv~v~~~~n~tG~~~~---l 157 (364)
T PLN02651 83 FYKDKKKHVITTQTEHKCVLDSCRHLQQEGFEVTYLPVK--SDGLVDLDELAAAIRPDTALVSVMAVNNEIGVIQP---V 157 (364)
T ss_pred hccCCCCEEEEcccccHHHHHHHHHHHhcCCEEEEEccC--CCCcCCHHHHHHhcCCCcEEEEEECCCCCceeccc---H
Confidence 46899999999888765443 34578898888875 34568999999999999999999999999999955 7
Q ss_pred HHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHHHH
Q 014936 196 QKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERM 275 (415)
Q Consensus 196 ~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~ 275 (415)
++|.++|+++|+++++|.+++... .+..+..++.+ +++.|.+|+++.+| +|+++++++....-.|.+...-
T Consensus 158 ~~I~~~~~~~g~~~~vD~a~~~g~----~~~~~~~~~~D---~~~~s~hK~~gp~G--~g~l~v~~~~~~~l~p~~~g~~ 228 (364)
T PLN02651 158 EEIGELCREKKVLFHTDAAQAVGK----IPVDVDDLGVD---LMSISGHKIYGPKG--VGALYVRRRPRVRLEPLMSGGG 228 (364)
T ss_pred HHHHHHHHHcCCEEEEEcchhhCC----cccCcccCCCC---EEEechhhhCCCCc--eEEEEEcCCCCCCCCccccCCC
Confidence 788888999999999999998732 22334444443 77888999744445 8998887632111111111000
Q ss_pred HhhccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhc-CCCCcCCCCC---CC--ceEEEEecCccc
Q 014936 276 KKYFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKE-IPCISCPHKP---EG--SMAVMLKLNLSL 349 (415)
Q Consensus 276 ~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~~~~~~~~~p---~~--g~~~~~~l~~~~ 349 (415)
.......++++.....++.++|+... +..+...++.++.++++.+.|++ +|+++++ .| .. ...+.+.++.
T Consensus 229 ~~~~~~~GT~~~~~~~~l~~al~~~~-~~~~~i~~~~~~l~~~l~~~l~~~~~~~~i~-~~~~~~~~~~~i~~~~~~~-- 304 (364)
T PLN02651 229 QERGRRSGTENTPLVVGLGAACELAM-KEMDYDEKHMKALRERLLNGLRAKLGGVRVN-GPRDPEKRYPGTLNLSFAY-- 304 (364)
T ss_pred ccCCccCCCccHHHHHHHHHHHHHHH-HhHHHHHHHHHHHHHHHHHHHHhhCCCEEEE-CCCCcccCcCCEEEEEeCC--
Confidence 00111245667777777777776433 23477778889999999999985 6787744 33 11 2244444542
Q ss_pred cCCCCCHHHHHHHHHhhcCeEEEcCCCCCC-------------------CCeEEEEee--CChhhHH
Q 014936 350 LDDIIDDIDFCFKLAKEESVIILPGTAVGL-------------------KNWLRVTFA--VDPYSLE 395 (415)
Q Consensus 350 ~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~-------------------~~~iRi~~~--~~~~~l~ 395 (415)
.+..++...| .+ |.++.|..|.. .+.+|+|++ ++++|++
T Consensus 305 ----~~~~~~~~~L-~~--i~v~~g~~c~~~~~~~~~~~~~~g~~~~~~~~~vR~S~~~~~t~~did 364 (364)
T PLN02651 305 ----VEGESLLMGL-KE--VAVSSGSACTSASLEPSYVLRALGVPEEMAHGSLRLGVGRFTTEEEVD 364 (364)
T ss_pred ----CCHHHHHHHh-CC--EEEEchhhcCCCCCCcCHHHHHcCCChHHhCceEEEEcCCCCCHHHcC
Confidence 1456666665 44 99998887632 268999995 5777764
No 203
>PTZ00125 ornithine aminotransferase-like protein; Provisional
Probab=99.94 E-value=5.2e-24 Score=202.68 Aligned_cols=341 Identities=17% Similarity=0.176 Sum_probs=217.5
Q ss_pred cCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCC--CCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChH
Q 014936 33 NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAP--TAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCT 110 (415)
Q Consensus 33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~--~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~ 110 (415)
.++.++||..|.-.... --.+|.+.+++.+.+....+ .... .....++++.++++. ..+.++++++|+
T Consensus 29 dg~~~lD~~~~~~~~~~-Gh~~p~v~~a~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~--------~~~~~~~~~SGs 98 (400)
T PTZ00125 29 EGKKYYDFLSAYSAVNQ-GHCHPKILAALINQAQKLTL-TSRAFYNDVLGLAEKYITDLF--------GYDKVLPMNSGA 98 (400)
T ss_pred CCCEEEEcccCHhhccC-CcCCHHHHHHHHHHHHhccc-ccccccCHHHHHHHHHHHhCC--------CCCEEEEeCCcH
Confidence 47889999877522110 11578999999998764322 1111 112234444444432 236899999999
Q ss_pred HHHHHHHHHhcC----------CCCEEEEcCCCCcchHHHHHhCCCeEEEe----eccCC--CCCCCChhHHHhhcC-CC
Q 014936 111 QAIDVAMALLSR----------PGANILLPRPGFPIYELSAAFRHIEVRHF----DLLPD--KGWEVDLDDIESLAD-QN 173 (415)
Q Consensus 111 ~al~~~~~~l~~----------~gd~vi~~~p~y~~~~~~~~~~g~~~~~~----~~~~~--~~~~~~~~~l~~~~~-~~ 173 (415)
+|+..+++.+.. .+++|++.+-+|++........+...... +..+. .-.-.|++++++.++ ++
T Consensus 99 ~A~e~al~~~~~~~~~~~~~~~~~~~vl~~~~~~Hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~ 178 (400)
T PTZ00125 99 EAGETALKFARKWGYEVKGIPENQAKIIFCNGNFSGRTIGACSASTDPKCYNNFGPFVPGFELVDYNDVEALEKLLQDPN 178 (400)
T ss_pred HHHHHHHHHHHHHHHhccCCCCCCCeEEEECCCcCCccHHHHhhcCCcchhccCCCCCCCceEeCCCCHHHHHHHhCCCC
Confidence 999999997741 24688888888887654433222111000 00000 000137999999886 56
Q ss_pred ceEEEecCCCCccccCCC-HHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCc
Q 014936 174 TVALVIINPGNPCGNVYS-YQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGW 252 (415)
Q Consensus 174 ~~~v~i~~p~nptG~~~~-~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~ 252 (415)
+++|++..++||+|.+++ .+.+++|.++|++||+++|+||+|.++.+.|.... ....+....++ ++||.++.+++
T Consensus 179 ~~~v~~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~lli~Dev~~g~g~~G~~~~-~~~~~~~pd~~---~~sK~l~~g~~ 254 (400)
T PTZ00125 179 VAAFIVEPIQGEAGVIVPDDGYLKQVYELCKKYNVLLIVDEIQTGLGRTGKLLA-HDHEGVKPDIV---LLGKALSGGLY 254 (400)
T ss_pred eEEEEEcCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccchhhH-HHhcCCCCCEE---EEcccccCCCc
Confidence 777777777999999886 55699999999999999999999987665554211 11122122233 46899866556
Q ss_pred eEEEEEeeCCCCCCChHHHHHHHHhhc-cccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcC----C
Q 014936 253 RLGWFVTTDPCGMFRKPKVVERMKKYF-DILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEI----P 327 (415)
Q Consensus 253 r~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~----~ 327 (415)
|+||+++++ ++.+.+.... ..+.+.+++.+.++.+.|+...++ ...++++++.+++.+.|+++ +
T Consensus 255 ~ig~v~~~~--------~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~i~~~---~~~~~~~~~~~~l~~~l~~l~~~~~ 323 (400)
T PTZ00125 255 PISAVLAND--------DVMLVIKPGEHGSTYGGNPLACAVAVEALEVLKEE---KLAENAQRLGEVFRDGLKELLKKSP 323 (400)
T ss_pred CcEEEEEcH--------HHHhhccCCCCCCCCCcCHHHHHHHHHHHHHHHhc---CHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 999999976 6777765432 234567888888887776542111 23344445555555555543 2
Q ss_pred CCcCCCCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEe--eCChhhHHHHHHHHHHHH
Q 014936 328 CISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTF--AVDPYSLEECLDRIKSFY 405 (415)
Q Consensus 328 ~~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~--~~~~~~l~~~l~~l~~~~ 405 (415)
.+. . ....|.++++.++... .....++...++ ++||.+.|+. .+++||++ ..+++++++++++|.+++
T Consensus 324 ~~~-~-~~~~g~~~~v~~~~~~---~~~~~~~~~~l~-~~Gv~v~~~~----~~~lRi~~~~~~~~~~i~~~l~~l~~~l 393 (400)
T PTZ00125 324 WVK-E-IRGKGLLNAIVFDHSD---GVNAWDLCLKLK-ENGLLAKPTH----DNIIRFAPPLVITKEQLDQALEIIKKVL 393 (400)
T ss_pred CeE-E-EecccEEEEEEEccCc---chHHHHHHHHHH-HCCeEEeecC----CCEEEEECCccCCHHHHHHHHHHHHHHH
Confidence 222 1 2335778887775311 013456666665 6799998863 47999997 478999999999999988
Q ss_pred HHH
Q 014936 406 QRH 408 (415)
Q Consensus 406 ~~~ 408 (415)
+++
T Consensus 394 ~~~ 396 (400)
T PTZ00125 394 KSF 396 (400)
T ss_pred HHH
Confidence 765
No 204
>PRK07582 cystathionine gamma-lyase; Validated
Probab=99.94 E-value=4.9e-24 Score=198.74 Aligned_cols=283 Identities=16% Similarity=0.205 Sum_probs=194.0
Q ss_pred CCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHH----HhCC
Q 014936 70 FNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSA----AFRH 145 (415)
Q Consensus 70 ~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~----~~~g 145 (415)
+.+|++ ....+|++++|++. . ++.++++++++++..++.+++++||+|+++.|+|+.+...+ ...|
T Consensus 45 y~ry~~-p~~~~Le~~lA~l~--------~-~~~v~~~sG~~Ai~~~l~all~~Gd~Vl~~~~~y~~~~~~~~~~l~~~G 114 (366)
T PRK07582 45 YGRASN-PTWRALEAALGELE--------G-AEALVFPSGMAAITAVLRALLRPGDTVVVPADGYYQVRALAREYLAPLG 114 (366)
T ss_pred eECCCC-ccHHHHHHHHHHHc--------C-CCEEEECCHHHHHHHHHHHhcCCCCEEEEeCCCcHhHHHHHHHHHhcCe
Confidence 456666 46799999999986 2 35666677778999999999999999999999998876654 4578
Q ss_pred CeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCc
Q 014936 146 IEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPF 225 (415)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~ 225 (415)
+++..++.... .+ .+.++++++++++|+||+|.+ .++++|+++|+++|+++|+|++|.... +.
T Consensus 115 ~~v~~v~~~~~------~~----~~~~~t~lV~le~p~NPtg~v---~di~~I~~~a~~~g~~lvVD~t~~~~~--~~-- 177 (366)
T PRK07582 115 VTVREAPTAGM------AE----AALAGADLVLAETPSNPGLDV---CDLAALAAAAHAAGALLVVDNTTATPL--GQ-- 177 (366)
T ss_pred EEEEEECCCCh------HH----HhccCceEEEEECCCCCCCCc---cCHHHHHHHHHHcCCEEEEECCCCCcc--cc--
Confidence 89888875321 11 223578999999999999987 468899999999999999999986421 22
Q ss_pred ccccccCCCCCeEEEccCccccCC-CCceEEEEEeeCCCCCCChHHHHHHHHhhcc-ccCCchhHHHHHHHHhhCCCcHH
Q 014936 226 VPMGVFGSTVPILTLGSLSKRWIV-PGWRLGWFVTTDPCGMFRKPKVVERMKKYFD-ILGDPATFIQAAVPSILQQPDEV 303 (415)
Q Consensus 226 ~~~~~~~~~~~~i~~~s~sK~~~~-~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~a~~~~l~~~~~~ 303 (415)
.++. ++.+ ++++|+||.++. +|+++||+++++ +++.+.++.... ....+++.....+...|+.
T Consensus 178 ~p~~-~g~D---ivv~S~sK~l~G~~g~~~G~v~~~~-------~~l~~~l~~~~~~~g~~~~~~~a~l~~r~l~t---- 242 (366)
T PRK07582 178 RPLE-LGAD---LVVASDTKALTGHSDLLLGYVAGRD-------PELMAAVERWRLLAGAIPGPFEAWLAHRSLGT---- 242 (366)
T ss_pred Cchh-cCCc---EEEecccccccCCCCeeEEEEEcCc-------HHHHHHHHHHHHHhCCCCCHHHHHHHHhcccc----
Confidence 1221 2322 788999998744 679999999754 256676665533 3345677777777666654
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCC----------------CceEEEEecCccccCCCCCHHHHHHHHHhhc
Q 014936 304 FFKKTLNLLKQSVDICYNKIKEIPCISCPHKPE----------------GSMAVMLKLNLSLLDDIIDDIDFCFKLAKEE 367 (415)
Q Consensus 304 ~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~----------------~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~ 367 (415)
+..+.++.+++...+.+.|++.|.+..+.+|. .|-.+.++++ + .+.+.+.+.+.
T Consensus 243 -l~~R~~~~~~na~~la~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~~~gg~~s~~~~--------~-~~~~~~~~~~l 312 (366)
T PRK07582 243 -LGLRFARQCANALAVAELLAGHPAVRGVRYPGLPGDPAHEVAARQMRRFGGLVSFELA--------D-AAAAERFVAAS 312 (366)
T ss_pred -HHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHhhCCCCcceEEEEeC--------C-HHHHHHHHHhC
Confidence 56677888889999999999887765443332 2334455553 2 22344455666
Q ss_pred CeEEE---cCCCCC-----------C-CCeEEEEeeCChhhHHHHHHHHHHHHH
Q 014936 368 SVIIL---PGTAVG-----------L-KNWLRVTFAVDPYSLEECLDRIKSFYQ 406 (415)
Q Consensus 368 gi~v~---~g~~~~-----------~-~~~iRi~~~~~~~~l~~~l~~l~~~~~ 406 (415)
++... -|.... . ++.||+|++.. +.+..++.|.++++
T Consensus 313 ~~~~~~~s~G~~~sl~~~~~~~~~~~~~~liR~svGlE--~~~dli~dl~~al~ 364 (366)
T PRK07582 313 RLVVAATSFGGVHTSADRRARWGDAVPEGFVRLSCGIE--DTDDLVADLERALD 364 (366)
T ss_pred CcceecccCCCccchhhhHHHcCCCCCCCeEEEEeccC--CHHHHHHHHHHHHh
Confidence 66543 122111 1 35799999864 34555666665554
No 205
>PRK08574 cystathionine gamma-synthase; Provisional
Probab=99.94 E-value=1.9e-23 Score=195.60 Aligned_cols=224 Identities=16% Similarity=0.130 Sum_probs=166.3
Q ss_pred CCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHH---HhCCCeE
Q 014936 72 GYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSA---AFRHIEV 148 (415)
Q Consensus 72 ~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~---~~~g~~~ 148 (415)
++++ +...+|++.+|+++ ..+++++++|+++|+..++.+++++||+|+++.|+|.++...+ ...|+++
T Consensus 49 r~~n-p~~~~lE~~lA~l~--------g~~~~l~~~sG~~Ai~~~l~~ll~~GD~Vlv~~~~y~~~~~~~~~~~~~g~~v 119 (385)
T PRK08574 49 REEN-PTLRPLEEALAKLE--------GGVDALAFNSGMAAISTLFFSLLKAGDRVVLPMEAYGTTLRLLKSLEKFGVKV 119 (385)
T ss_pred CCCC-ccHHHHHHHHHHHh--------CCCcEEEeCCHHHHHHHHHHHHhCCCCEEEEcCCCchhHHHHHHHhhccCcEE
Confidence 4444 46789999999998 3467888999999999999999999999999999999877665 4457776
Q ss_pred EEeeccCCCCCCCChhHHHhhcCC-CceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCccc
Q 014936 149 RHFDLLPDKGWEVDLDDIESLADQ-NTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVP 227 (415)
Q Consensus 149 ~~~~~~~~~~~~~~~~~l~~~~~~-~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~ 227 (415)
..++ +|++++++++++ ++++|++.+|+||||.+++ +++|+++|+++|+++|+|++|+.... ..+
T Consensus 120 ~~~~--------~d~~~l~~~i~~~~tklV~ie~p~NPtG~v~d---l~~I~~la~~~gi~livD~t~a~~~~----~~~ 184 (385)
T PRK08574 120 VLAY--------PSTEDIIEAIKEGRTKLVFIETMTNPTLKVID---VPEVAKAAKELGAILVVDNTFATPLL----YRP 184 (385)
T ss_pred EEEC--------CCHHHHHHhcCccCceEEEEECCCCCCCEecC---HHHHHHHHHHcCCEEEEECCCCcccc----CCh
Confidence 6542 368899999987 8999999999999999976 66888889999999999999965331 112
Q ss_pred ccccCCCCCeEEEccCccccCCCCceE-EEEEeeCCCCCCChHHHHHHHHhhcc-ccCCchhHHHHHHHHhhCCCcHHHH
Q 014936 228 MGVFGSTVPILTLGSLSKRWIVPGWRL-GWFVTTDPCGMFRKPKVVERMKKYFD-ILGDPATFIQAAVPSILQQPDEVFF 305 (415)
Q Consensus 228 ~~~~~~~~~~i~~~s~sK~~~~~G~r~-G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~ 305 (415)
+ ..+. .+++.|++|.++.+|-.+ |++++.+ .++.+.++.... .+...++.....+...|+. +
T Consensus 185 l-~~Ga---Divv~S~sK~l~g~~d~~gG~vi~~~-------~~~~~~~~~~~~~~g~~~~p~~a~l~l~~l~t-----L 248 (385)
T PRK08574 185 L-RHGA---DFVVHSLTKYIAGHNDVVGGVAVAWS-------GEFLEELWEWRRRLGTIMQPFEAYLVLRGLKT-----L 248 (385)
T ss_pred h-hhCC---cEEEeeCceeecCCCCceeEEEEECc-------HHHHHHHHHHHHhcCCCCCHHHHHHHHcccCc-----H
Confidence 2 1222 388999999987777654 6566643 246666655433 3445566655555555554 6
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCCCcCCCCC
Q 014936 306 KKTLNLLKQSVDICYNKIKEIPCISCPHKP 335 (415)
Q Consensus 306 ~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p 335 (415)
..+.++..+++..+.+.|+..|.+..+.+|
T Consensus 249 ~~R~~~~~~na~~la~~L~~~p~v~~V~yP 278 (385)
T PRK08574 249 EVRFERQCRNAMAIAEFLSEHPKVAEVYYP 278 (385)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCcCEEECC
Confidence 677778888889999999887765534343
No 206
>PRK07050 cystathionine beta-lyase; Provisional
Probab=99.94 E-value=1.1e-23 Score=197.88 Aligned_cols=294 Identities=16% Similarity=0.113 Sum_probs=203.7
Q ss_pred CCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHH----HHHhCC
Q 014936 70 FNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYEL----SAAFRH 145 (415)
Q Consensus 70 ~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~----~~~~~g 145 (415)
+.+|+++ ...+|++.++++. ..+++++++|+++|+.+++.+++++||+|+++.|+|..+.. .+...|
T Consensus 59 Y~r~~~p-t~~~Le~~lA~l~--------g~~~~l~~~sgt~Ai~~~l~al~~~GD~Vl~~~~~y~~~~~~~~~~~~~~G 129 (394)
T PRK07050 59 YGLHATP-TSLALAQRLAEIE--------GGRHALLQPSGLAAISLVYFGLVKAGDDVLIPDNAYGPNRDHGEWLARDFG 129 (394)
T ss_pred cCCCCCH-HHHHHHHHHHHHh--------CCCeEEEeccHHHHHHHHHHHHhCCCCEEEEecCCcccHHHHHHHHHHhcC
Confidence 4566553 5688999999887 35789999999999999999999999999999999998664 456789
Q ss_pred CeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCc
Q 014936 146 IEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPF 225 (415)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~ 225 (415)
+++..++.. +.+.+++++++++++|++++|+||+|.. .++++|+++|+++|+++|+|++|+...+ .
T Consensus 130 i~v~~vd~~-------~~~~l~~~i~~~tklV~le~p~Np~~~~---~di~~I~~ia~~~gi~livD~a~a~~~~----~ 195 (394)
T PRK07050 130 ITVRFYDPL-------IGAGIADLIQPNTRLIWLEAPGSVTMEV---PDVPAITAAARARGVVTAIDNTYSAGLA----F 195 (394)
T ss_pred eEEEEECCC-------CHHHHHHhcCCCCeEEEEECCCCCCccH---hhHHHHHHHHHHcCCEEEEECCcccccc----c
Confidence 988877531 4577888898999999999999999765 8999999999999999999999976432 1
Q ss_pred ccccccCCCCCeEEEccCccccCC-CCceEEEEEeeCCCCCCChHHHHHHHHhhcc-ccCCchhHHHHHHHHhhCCCcHH
Q 014936 226 VPMGVFGSTVPILTLGSLSKRWIV-PGWRLGWFVTTDPCGMFRKPKVVERMKKYFD-ILGDPATFIQAAVPSILQQPDEV 303 (415)
Q Consensus 226 ~~~~~~~~~~~~i~~~s~sK~~~~-~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~a~~~~l~~~~~~ 303 (415)
.++ .++. .+++.|++|.++. .+.+.|++++.+ +++.++++.... ...+.++.....+...|+.
T Consensus 196 ~~l-~~Ga---Di~v~S~tK~~~g~~~~~gG~v~~~~-------~~~~~~~~~~~~~~G~~~~~~~a~l~lr~l~t---- 260 (394)
T PRK07050 196 KPF-EHGV---DISVQALTKYQSGGSDVLMGATITAD-------AELHAKLKLARMRLGIGVSADDCSLVLRGLPS---- 260 (394)
T ss_pred CHH-HcCC---eEEEEECCceecCCCCeeEEEEEECC-------HHHHHHHHHHHHhcCCCCCHHHHHHHHcCCCc----
Confidence 111 1222 3889999999753 456789888754 257777765543 3456666666655555554
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCC----------------CceEEEEecCccccCCCCCHHHHHHHHHhhc
Q 014936 304 FFKKTLNLLKQSVDICYNKIKEIPCISCPHKPE----------------GSMAVMLKLNLSLLDDIIDDIDFCFKLAKEE 367 (415)
Q Consensus 304 ~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~----------------~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~ 367 (415)
+..+.++..++...+.+.|++.|.+..+.+|. .|..+.+.+.... +..+..+++.. ++..
T Consensus 261 -l~~Rl~~~~~~a~~la~~L~~~p~v~~v~~p~l~~~p~~~~~~~~~~~~g~~~s~~l~~~~--~~~~~~~~~~~-l~~~ 336 (394)
T PRK07050 261 -LQVRLAAHDRSALEVAEWLKARPEIATVLHPALPDCPGHAFWMRDFTGAGGLFSVVFDERY--SPAQVDAFVEA-LELF 336 (394)
T ss_pred -HHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCCceEEEEEECCCC--CHHHHHHHHHc-CCCC
Confidence 45577777777788888888776655343332 1223344443210 00123344443 3555
Q ss_pred CeEEEcCCCCCC-----------------CCeEEEEeeCChhhHHHHHHHHHHHHHH
Q 014936 368 SVIILPGTAVGL-----------------KNWLRVTFAVDPYSLEECLDRIKSFYQR 407 (415)
Q Consensus 368 gi~v~~g~~~~~-----------------~~~iRi~~~~~~~~l~~~l~~l~~~~~~ 407 (415)
++.++-|..... .+.||+|++.. +.+.+++.|.+++.+
T Consensus 337 ~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~iR~svGlE--~~~dl~~dl~~al~~ 391 (394)
T PRK07050 337 AIGWSWGGACSLAMPYDVASMRTAKWPHRGTLVRLYIGLE--DEADLIADLEQALEA 391 (394)
T ss_pred eeccccCCccceEeeCcccccchhhcCCCCCEEEEEeCcC--CHHHHHHHHHHHHHH
Confidence 655554443210 25799999874 566666777766654
No 207
>TIGR03235 DNA_S_dndA cysteine desulfurase DndA. This model describes DndA, a protein related to IscS and part of a larger family of cysteine desulfurases. It is encoded, typically, divergently from a conserved, sparsely distributed operon for sulfur modification of DNA. This modification system is designated dnd, after the phenotype of DNA degradation during electrophoresis. The system is sporadically distributed in bacteria, much like some restriction enzyme operons. DndB is described as a putative ATPase.
Probab=99.93 E-value=1.1e-24 Score=203.70 Aligned_cols=317 Identities=14% Similarity=0.117 Sum_probs=211.9
Q ss_pred CCCcHHHHHHHHHHHhcCCC--CCCCCC------CCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhc-
Q 014936 51 FHTTHVATEAVAEALLSEKF--NGYAPT------AGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLS- 121 (415)
Q Consensus 51 ~~~~~~~~~a~~~~~~~~~~--~~y~~~------~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~- 121 (415)
.++++.+++++.+.+..... ...... .-..++|+.+++++ ++++++|++++|++++++.++.++.
T Consensus 8 ~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~------g~~~~~v~~~~g~t~a~~~~l~~l~~ 81 (353)
T TIGR03235 8 TPIDPAVAEAMLPWLLEEFGNPSSRTHEFGHNAKKAVERARKQVAEAL------GADTEEVIFTSGATESNNLAILGLAR 81 (353)
T ss_pred CCCCHHHHHHHHHHHHhcCCCCCchhhHHHHHHHHHHHHHHHHHHHHh------CCCCCeEEEeCCHHHHHHHHHHHHHH
Confidence 35678999999888753111 110000 11457888888887 4678899999999999999998875
Q ss_pred ---CCC-CEEEEcCCCCcchHH---HHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHH
Q 014936 122 ---RPG-ANILLPRPGFPIYEL---SAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQH 194 (415)
Q Consensus 122 ---~~g-d~vi~~~p~y~~~~~---~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~ 194 (415)
++| +.|++....|+++.. .++..|++++.++.+. ++.+|++++++.++++++++++++|+||||.++|
T Consensus 82 ~~~~~g~~~vi~~~~~~~s~~~~~~~~~~~G~~v~~v~~~~--~~~~d~~~l~~~l~~~~~lv~~~~~~n~tG~~~~--- 156 (353)
T TIGR03235 82 AGEQKGKKHIITSAIEHPAVLEPIRALERNGFTVTYLPVDE--SGRIDVDELADAIRPDTLLVSIMHVNNETGSIQP--- 156 (353)
T ss_pred hcccCCCCeeeEcccccHHHHHHHHHHHhcCCEEEEEccCC--CCcCCHHHHHHhCCCCCEEEEEEcccCCceeccC---
Confidence 356 788888877776544 3455799999988753 4568999999999888999999999999999976
Q ss_pred HHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCC--ChHHHH
Q 014936 195 LQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMF--RKPKVV 272 (415)
Q Consensus 195 l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~--~~~~~~ 272 (415)
+++|+++|+++|+++++|++++.... ...+...+.+ +++.|.+|+++.+| +|+++++++.... ..|.+.
T Consensus 157 ~~~I~~l~~~~~~~~ivD~a~~~g~~----~~~~~~~~~D---~~~~s~~K~~gp~g--~g~l~~~~~~~~~~~~~~~~~ 227 (353)
T TIGR03235 157 IREIAEVLEAHEAFFHVDAAQVVGKI----TVDLSADRID---LISCSGHKIYGPKG--IGALVIRKRGKPKAPLKPIMF 227 (353)
T ss_pred HHHHHHHHHHcCCEEEEEchhhcCCc----cccccccCCC---EEEeehhhcCCCCc--eEEEEEccCcccccccCceee
Confidence 68888889999999999999986432 2223222222 77778899876666 8999887632100 000000
Q ss_pred HHHHhhccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCC--ceEEEEecCcccc
Q 014936 273 ERMKKYFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEG--SMAVMLKLNLSLL 350 (415)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~--g~~~~~~l~~~~~ 350 (415)
..-.......++++.....++.++++.. ....++..++++++++++.+.|++ ++++++..+.. ..++.+.++.
T Consensus 228 ~~~~~~~~~~gt~~~~~~~al~~al~~~-~~~~~~~~~~~~~l~~~l~~~l~~-~g~~~~~~~~~~~~~i~~~~~~~--- 302 (353)
T TIGR03235 228 GGGQERGLRPGTLPVHLIVGMGEAAEIA-RRNAQAWEVKLRAMRNQLRDALQT-LGVKLNGDPAETIPHILNFSIDG--- 302 (353)
T ss_pred CCCCcCccccCCCChHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHHHHHhcc-CCeEEeCCcccccCCEEEEEeCC---
Confidence 0000001113455666666666666542 245678889999999999999988 48774322322 1233333331
Q ss_pred CCCCCHHHHHHHHHhhcCeEEEcCCCCCCC----CeEEEEeeCChhhHHHH
Q 014936 351 DDIIDDIDFCFKLAKEESVIILPGTAVGLK----NWLRVTFAVDPYSLEEC 397 (415)
Q Consensus 351 ~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~----~~iRi~~~~~~~~l~~~ 397 (415)
. +..++...| ++ +|.+.+|..|... .++|.+++.+++++..+
T Consensus 303 --~-~~~~v~~~L-~~-~i~v~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~ 348 (353)
T TIGR03235 303 --V-NSEALIVNL-RA-DAAVSTGSACSSSKYEPSHVLQAMGLDTDRARGA 348 (353)
T ss_pred --c-CHHHHHHHH-hC-CeEEEchhhcCCCCCCCCHHHHHcCCCHHHhCcc
Confidence 1 445555554 55 9999999998653 36888887776655443
No 208
>PF00266 Aminotran_5: Aminotransferase class-V; InterPro: IPR000192 Aminotransferases share certain mechanistic features with other pyridoxal- phosphate dependent enzymes, such as the covalent binding of the pyridoxal- phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. This entry represents the class V aminotransferases and the related, though functionally distinct, cysteine desulfurases.; GO: 0008152 metabolic process; PDB: 3FFR_A 1N2T_B 1ELQ_A 1N31_A 1ELU_B 1QZ9_A 1VJO_A 3ISL_B 1BJO_B 1BJN_B ....
Probab=99.93 E-value=2.3e-23 Score=196.17 Aligned_cols=312 Identities=21% Similarity=0.246 Sum_probs=223.8
Q ss_pred CCCcHHHHHHHHHHHhcCCCCC----CCC----CCCcHHHHHHHHHHHhhhCCCCCCC-CcEEEeCChHHHHHHHHHHh-
Q 014936 51 FHTTHVATEAVAEALLSEKFNG----YAP----TAGLPLTRRAIAEYLSRDLPYKLTP-NDVFVTSGCTQAIDVAMALL- 120 (415)
Q Consensus 51 ~~~~~~~~~a~~~~~~~~~~~~----y~~----~~g~~~lr~~ia~~~~~~~~~~~~~-~~i~i~~g~~~al~~~~~~l- 120 (415)
.+.++.+.+++.+.+.....+. +.. .....++|+.+++++ ++++ ++|++++|++++++.++.++
T Consensus 9 ~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~l------g~~~~~~v~~~~~~t~a~~~~~~~l~ 82 (371)
T PF00266_consen 9 GPMPKSVLEAISDYLRNFYANPHSGVSHRSREFAEILEEAREALAKLL------GAPPDEEVVFTSNGTEALNAVASSLL 82 (371)
T ss_dssp -B-BHHHHHHHHHHHHHSGSSTSTSSSTTSHHHHHHHHHHHHHHHHHH------TSSTTEEEEEESSHHHHHHHHHHHHH
T ss_pred cCCCHHHHHHHHHHHHHhhhcCcccccchhhhhhHHHHHHHHHHHHhc------CCccccccccccccchhhhhhhhccc
Confidence 3567889999998876422111 111 122457888888888 4567 89999999999999999999
Q ss_pred --cCCCCEEEEcCCCCcchH----HHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHH
Q 014936 121 --SRPGANILLPRPGFPIYE----LSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQH 194 (415)
Q Consensus 121 --~~~gd~vi~~~p~y~~~~----~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~ 194 (415)
.++|++|++.+-.|++.. ...+..|+++..++.+.. ..+|++++++.++++++++++++.+|.||...|
T Consensus 83 ~~~~~g~~vl~~~~~~~s~~~~~~~~~~~~g~~v~~i~~~~~--~~~~~~~~~~~l~~~~~lv~~~~~~~~tG~~~p--- 157 (371)
T PF00266_consen 83 NPLKPGDEVLVTSNEHPSNRYPWEEIAKRKGAEVRVIPADPG--GSLDLEDLEEALNPDTRLVSISHVENSTGVRNP--- 157 (371)
T ss_dssp HHGTTTCEEEEEESSHHHHHHHHHHHHHHTTEEEEEEEEGTT--SSCSHHHHHHHHHTTESEEEEESBETTTTBBSS---
T ss_pred cccccccccccccccccccccccccccccchhhhcccccccc--chhhhhhhhhhhccccceEEeecccccccEEee---
Confidence 789999999999998765 344578999999987543 358999999999999999999999999999965
Q ss_pred HHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHHH
Q 014936 195 LQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVER 274 (415)
Q Consensus 195 l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~ 274 (415)
+++|.++|+++|+++++|.+++... .+..+..++.+ ++++|.+|.++.+| +|+++.++ +..+.
T Consensus 158 i~~I~~~~~~~~~~~~vD~~~~~g~----~~id~~~~~~D---~~~~s~~Kl~gp~G--~g~l~v~~--------~~~~~ 220 (371)
T PF00266_consen 158 IEEIAKLAHEYGALLVVDAAQSAGC----VPIDLDELGAD---FLVFSSHKLGGPPG--LGFLYVRP--------EAIER 220 (371)
T ss_dssp HHHHHHHHHHTTSEEEEE-TTTTTT----SS--TTTTTES---EEEEESTSTTSSST--EEEEEEEH--------HHHHH
T ss_pred eceehhhhhccCCceeEechhcccc----ccccccccccc---eeeecccccCCCCc--hhhheehh--------hhhhc
Confidence 7788888889999999999999733 33444444443 78889999656667 79998876 44444
Q ss_pred HHhhc----------------------cccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCC
Q 014936 275 MKKYF----------------------DILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCP 332 (415)
Q Consensus 275 ~~~~~----------------------~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~ 332 (415)
++... ...++++.....++..+++...+..+++..++..++.+++.+.|++++++..+
T Consensus 221 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~~~~~l~~~~~~~~~ 300 (371)
T PF00266_consen 221 LRPAKPGGGYLDFPSLQEYGLADDARRFEGGTPNVPAIYALNEALKLLEEIGIERIRERIRELAEYLREALEELPGIEVL 300 (371)
T ss_dssp HHTSSSSSSTTTHHHHHHHCHHSTTTGSSSSS--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTEEES
T ss_pred cccccccccccccccchhcccccccccccccceeeehhhhHHHHHhhhhccccccchhhhhhHHHHHHhhhhcCCceeEe
Confidence 42210 01235666666777777765445667888899999999999999998877733
Q ss_pred C---CCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCC--------CCCeEEEEee--CChhhHHHH
Q 014936 333 H---KPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVG--------LKNWLRVTFA--VDPYSLEEC 397 (415)
Q Consensus 333 ~---~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~--------~~~~iRi~~~--~~~~~l~~~ 397 (415)
. .+..+..+.+.++. .+..++...| ++.||.+..|..+. ..+.||+|+. .+++|++++
T Consensus 301 ~~~~~~~~~~i~~~~~~~------~~~~~~~~~L-~~~~I~~~~G~~~~~~~~~~~~~~~~iRvS~~~~nt~~dv~~l 371 (371)
T PF00266_consen 301 GPDDEPRRPSIVSFNLPG------SDADDVVKYL-EERGIAVSTGSACAGPSLDILGMGGVIRVSLHYYNTEEDVDRL 371 (371)
T ss_dssp SSSCGGBGTTEEEEEETT------SSHHHHHHHH-HHHTEEEEESTTTCHHHHHHHHTTTEEEEE-GTTSSHHHHHHH
T ss_pred eecccccccceEEEeecC------CCHHHHHHHH-hhcCEEEeccCcccHHHHHHhCCCCEEEEeccCCCCHHHHhhC
Confidence 2 12223445555543 2455555555 55699999988776 3589999995 688998864
No 209
>PRK05968 hypothetical protein; Provisional
Probab=99.93 E-value=3.7e-23 Score=194.29 Aligned_cols=288 Identities=16% Similarity=0.103 Sum_probs=202.1
Q ss_pred CCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchH----HHHHhCCC
Q 014936 71 NGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYE----LSAAFRHI 146 (415)
Q Consensus 71 ~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~----~~~~~~g~ 146 (415)
.+|+.+ ...+|++.+|++.+ .+..+++++|++|+..++.+++++||+|+++.+.|.+.. ..+...|+
T Consensus 58 ~r~~~p-~~~~le~~lA~l~g--------~~~av~~~sG~~Ai~~al~al~~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~ 128 (389)
T PRK05968 58 SRGDNP-TVRAFEEMLAKLEG--------AEDARGFASGMAAISSTVLSFVEPGDRIVAVRHVYPDAFRLFETILKRMGV 128 (389)
T ss_pred cCCCCh-hHHHHHHHHHHHhC--------CCcEEEECCHHHHHHHHHHHHhCCCCEEEEeCCCchHHHHHHHHHHHHcCc
Confidence 344443 46899999999983 234556677788999999999999999999999998643 45566799
Q ss_pred eEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcc
Q 014936 147 EVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFV 226 (415)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~ 226 (415)
++..++. .|++++++++ +++++|++.+|+||++.+ .++++|+++|+++|+++|+|++|+...+..
T Consensus 129 ~v~~vd~-------~d~~~l~~~i-~~tklV~ie~pt~~~~~~---~dl~~i~~la~~~gi~vivD~a~a~~~~~~---- 193 (389)
T PRK05968 129 EVDYVDG-------RDEEAVAKAL-PGAKLLYLESPTSWVFEL---QDVAALAALAKRHGVVTMIDNSWASPVFQR---- 193 (389)
T ss_pred eEEEeCC-------CCHHHHHHhc-ccCCEEEEECCCCCCCcH---HHHHHHHHHHHHcCCEEEEECCCcchhccC----
Confidence 9888753 2789999888 578899998877766555 999999999999999999999997654321
Q ss_pred cccccCCCCCeEEEccCccccCCCC-ceEEEEEeeCCCCCCChHHHHHHHHhhc--cccCCchhHHHHHHHHhhCCCcHH
Q 014936 227 PMGVFGSTVPILTLGSLSKRWIVPG-WRLGWFVTTDPCGMFRKPKVVERMKKYF--DILGDPATFIQAAVPSILQQPDEV 303 (415)
Q Consensus 227 ~~~~~~~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~a~~~~l~~~~~~ 303 (415)
++ ..+. .+++.|++|.++.+| ++.|+++.++ +++++++... ......++.....+...|+.
T Consensus 194 p~-~~g~---Divv~S~tK~l~g~~~~~gG~i~~~~--------~~~~~l~~~~~~~~g~~~~~~~A~~~l~~L~t---- 257 (389)
T PRK05968 194 PI-TLGV---DLVIHSASKYLGGHSDTVAGVVAGSK--------EHIARINAEAYPYLGAKLSPFEAWLLLRGLRT---- 257 (389)
T ss_pred ch-hcCC---cEEEeeccccccCCCCeEEEEEEECH--------HHHHHHHHHHHHhCCCCCChHHHHHHHcccCc----
Confidence 12 1222 277889999988755 5788887654 5666666432 22345666666666666654
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCC-----------CceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEE
Q 014936 304 FFKKTLNLLKQSVDICYNKIKEIPCISCPHKPE-----------GSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIIL 372 (415)
Q Consensus 304 ~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~-----------~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~ 372 (415)
+..+.++..++...+.+.|+.+|++..+.+|. .|..+.++++. + .+..+++..| +..++.++
T Consensus 258 -l~~r~~~~~~~a~~la~~L~~~p~v~~v~~p~l~~~~~~~~~g~g~~~sf~~~~----~-~~~~~f~~~L-~~~~~~~s 330 (389)
T PRK05968 258 -LPLRMKAHEASALEIARRLKAHPVVERVCHPALANHPPAGLSGTSGLFSFIFRE----G-IDVRAFADAL-KLFRLGVS 330 (389)
T ss_pred -HHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCChHHhCCCCceEEEEEECC----H-HHHHHHHHhC-CccEEecC
Confidence 57777777888889999999988886555552 23355555642 1 1345555554 55676666
Q ss_pred cCCCCC----------------------C-CCeEEEEeeCChhhHHHHHHHHHHHHHH
Q 014936 373 PGTAVG----------------------L-KNWLRVTFAVDPYSLEECLDRIKSFYQR 407 (415)
Q Consensus 373 ~g~~~~----------------------~-~~~iRi~~~~~~~~l~~~l~~l~~~~~~ 407 (415)
-|..+. . ++.||+|++.. +.+.+++.|++++++
T Consensus 331 ~G~~~slv~p~~~~~~~~~~~~~~~~~gi~~~liR~SvGlE--~~~dl~~dl~~al~~ 386 (389)
T PRK05968 331 WGGHESLVVPAEVVLQQKAQPNSAARFGVSPRSVRLHVGLE--GTEALWADLEQALAA 386 (389)
T ss_pred CCCCCceeeeCcccccccCCHHHHHhcCCCCCeEEEEeccC--CHHHHHHHHHHHHHH
Confidence 665544 1 46899999863 455666666666654
No 210
>PRK08248 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.93 E-value=1e-22 Score=192.75 Aligned_cols=232 Identities=15% Similarity=0.122 Sum_probs=170.3
Q ss_pred CCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchH----HHHHhCCCe
Q 014936 72 GYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYE----LSAAFRHIE 147 (415)
Q Consensus 72 ~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~----~~~~~~g~~ 147 (415)
+++. +....|++.+|++. ..+..++++||++|+..++..++++||+|+++.+.|++.. ..++..|++
T Consensus 60 r~~~-p~~~~Le~~lA~le--------g~~~al~~~sG~~Ai~~al~~ll~~GD~Vlv~~~~y~~t~~~~~~~~~~~Gv~ 130 (431)
T PRK08248 60 RIMN-PTTDVFEKRIAALE--------GGIGALAVSSGQAAITYSILNIASAGDEIVSSSSLYGGTYNLFAHTLPKLGIT 130 (431)
T ss_pred CCCC-chHHHHHHHHHHHh--------CCCcEEEECCHHHHHHHHHHHHhCCCCEEEEccCchhhHHHHHHHHHHhCCEE
Confidence 3344 35678999999987 3568889999999999999999999999999999997643 345678999
Q ss_pred EEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCccc
Q 014936 148 VRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVP 227 (415)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~ 227 (415)
++.++. .|++++++++++++++|++++|+||||.+++ +++|+++|+++|+++|+|++++. +....+
T Consensus 131 v~~vd~-------~d~e~l~~ai~~~tklV~l~sp~NPtG~v~d---i~~I~~la~~~gi~vIvD~t~a~----~~~~~p 196 (431)
T PRK08248 131 VKFVDP-------SDPENFEAAITDKTKALFAETIGNPKGDVLD---IEAVAAIAHEHGIPLIVDNTFAS----PYLLRP 196 (431)
T ss_pred EEEECC-------CCHHHHHHhcCCCCeEEEEECCCCCCCcccC---HHHHHHHHHHcCCEEEEeCCCCc----cccCCh
Confidence 988864 3789999999889999999999999999976 56888889999999999999863 112222
Q ss_pred ccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCC-----------Ch--------------HHH-HHHHHhh-cc
Q 014936 228 MGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMF-----------RK--------------PKV-VERMKKY-FD 280 (415)
Q Consensus 228 ~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~-----------~~--------------~~~-~~~~~~~-~~ 280 (415)
+ .++. .+++.|++|.++.+|.++|++++.+....+ .+ +.+ .+..... ..
T Consensus 197 l-~~ga---Divv~S~tK~lgg~g~~~Gg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (431)
T PRK08248 197 I-EHGA---DIVVHSATKFIGGHGTSIGGVIVDSGKFDWKGSGKFPGLTEPDPSYHGLVYTDAVGEAAYITKARVQLLRD 272 (431)
T ss_pred h-HcCC---CEEEEcCccccCCCCCceEEEEEeCCccccccccccccccCCccccccchhhhhhchhhHHHHHHHHHHHh
Confidence 2 2333 388899999999999999998875432110 00 000 1111111 22
Q ss_pred ccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCC
Q 014936 281 ILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKP 335 (415)
Q Consensus 281 ~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p 335 (415)
.....++.....+..-|+. +..+.++..++...+.+.|++.|.+..+.+|
T Consensus 273 ~G~~l~p~~a~l~~rgl~t-----l~~R~~~~~~nA~~la~~L~~~p~v~~V~yP 322 (431)
T PRK08248 273 LGAALSPFNSFLLLQGLET-----LHLRMERHSENALAVAKFLEEHEAVEWVSYP 322 (431)
T ss_pred cCCCCCHHHHHHHhcCcCc-----HHHHHHHHHHHHHHHHHHHHhCCCcceEECC
Confidence 3345566666666666655 6778888899999999999988876644444
No 211
>TIGR00700 GABAtrnsam 4-aminobutyrate aminotransferase, prokaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=99.93 E-value=4.4e-23 Score=196.25 Aligned_cols=352 Identities=16% Similarity=0.099 Sum_probs=212.9
Q ss_pred cCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHH
Q 014936 33 NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQA 112 (415)
Q Consensus 33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~a 112 (415)
+|+.++|+..|.-....+ -.+|.+.+++++++.......+.. ...+.+..+|+.+.+..+ +...+.++++++|++|
T Consensus 31 dG~~ylD~~~g~~~~~lG-h~~p~v~~a~~~ql~~~~~~~~~~--~~~~~~~~la~~l~~~~p-~~~~~~v~f~~sGseA 106 (420)
T TIGR00700 31 DGNRLIDFASGIAVLNIG-HSHPRVVDAVRTQVAEFTHTCFMV--TPYEGYVALAEKLNRIAP-GSGPKKSVFFNSGAEA 106 (420)
T ss_pred CCCEEEECccCHHhccCC-CCCHHHHHHHHHHHHhccCccccc--cCChHHHHHHHHHHHhCC-CCCCCEEEEeCCcHHH
Confidence 488999998885322111 247899999999987643322221 112233344444433221 1123689999999999
Q ss_pred HHHHHHHhc--CCCCEEEEcCCCCcchHHHHHhCCC--------------eEEEeeccCC-C------C--CCCChhHHH
Q 014936 113 IDVAMALLS--RPGANILLPRPGFPIYELSAAFRHI--------------EVRHFDLLPD-K------G--WEVDLDDIE 167 (415)
Q Consensus 113 l~~~~~~l~--~~gd~vi~~~p~y~~~~~~~~~~g~--------------~~~~~~~~~~-~------~--~~~~~~~l~ 167 (415)
++.+++... ....+|+....+|++....+..... .+..++.... . . +.-+++.++
T Consensus 107 ~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (420)
T TIGR00700 107 VENAVKIARSYTGRPGVVAFDHGFHGRTNMTMALTAKVMPYKSGFGPFAPEVYRAPLPYPYRDGLLDKQLSTDGELAAAR 186 (420)
T ss_pred HHHHHHHHHHhcCCCcEEEECCCcCCCcHHHHHhcCCCcccccCCCCCCCCcEEeCCCccccccccccchhHHHHHHHHH
Confidence 999998754 1225788899999987655443211 1111221100 0 0 000245566
Q ss_pred hhcC----CCceEEEecCC-CCccccCC-CHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEc
Q 014936 168 SLAD----QNTVALVIINP-GNPCGNVY-SYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLG 241 (415)
Q Consensus 168 ~~~~----~~~~~v~i~~p-~nptG~~~-~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 241 (415)
+.+. ....+.+|..| +..+|..+ +.+.+++|.++|++||+++|+||+|.++.+.+. ...+..++.. ..+.
T Consensus 187 ~~~~~~~~~~~iAavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~gillI~DEV~tg~gr~g~-~~a~~~~~~~---pDi~ 262 (420)
T TIGR00700 187 AIFVIDVGANNVAALVIEPVQGEGGFIVPAKGFVPALLDWCREHGIVFIADEVQTGFARTGA-MFACEHEGPE---PDLI 262 (420)
T ss_pred HHHHhhcCCCcEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEEecccCCcccch-hHHHhhcCCC---CCEE
Confidence 5542 23455667777 55678765 555599999999999999999999999877664 2222223222 2234
Q ss_pred cCccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhh-ccccCCchhHHHHHHHHhhCCCcH-HHHHHHHHHHHHHHHHH
Q 014936 242 SLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKY-FDILGDPATFIQAAVPSILQQPDE-VFFKKTLNLLKQSVDIC 319 (415)
Q Consensus 242 s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~a~~~~l~~~~~-~~~~~~~~~~~~~~~~l 319 (415)
++||.++ +|+|+||+++++ ++++.+... ...+.+.+++++.++.+.|+...+ ...++..+.-+..++.+
T Consensus 263 ~lsK~l~-~G~pig~v~~~~--------~i~~~~~~~~~~~T~~~~pl~~aaa~a~l~~l~~~~~~~~~~~~g~~l~~~L 333 (420)
T TIGR00700 263 TTAKSLA-DGLPLSGVTGRA--------EIMDAPAPGGLGGTYAGNPLACAAALAVLAIIESEGLIERARQIGRLVTDRL 333 (420)
T ss_pred Eeecccc-CCcceEEEEecH--------HHHhhcCCCCcCCCCCcCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHH
Confidence 6899976 899999999975 677766533 234567889999999777754222 22233323333333334
Q ss_pred HHHhhcCCCCcCCCCCCCceEEEEecCcccc--CCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEee--CChhhHH
Q 014936 320 YNKIKEIPCISCPHKPEGSMAVMLKLNLSLL--DDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFA--VDPYSLE 395 (415)
Q Consensus 320 ~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~--~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~--~~~~~l~ 395 (415)
.+..+++|.+..+ .+. |.++|+.+..... +.......+... +.++||.+.|+..|+ +++||+++ .++++++
T Consensus 334 ~~l~~~~~~~~~v-rg~-G~~~~i~~~~~~~~~~~~~~~~~l~~~-~~~~Gv~i~p~~~f~--~~lRl~p~l~~~~~~l~ 408 (420)
T TIGR00700 334 TTLKAVDPRIGDV-RGL-GAMIAVELVDPGTTEPDAGLAERIATA-AHAAGLLLLTCGMFG--NIIRFLPPLTIGDELLS 408 (420)
T ss_pred HHHHhhCCCEEEe-ecc-ceEEEEEEecCCCCCccHHHHHHHHHH-HHHCCeEEeccCCCC--CEEEEECCCCcCHHHHH
Confidence 3333445544422 333 7888887732100 000012233333 357899999987664 79999984 5899999
Q ss_pred HHHHHHHHHHH
Q 014936 396 ECLDRIKSFYQ 406 (415)
Q Consensus 396 ~~l~~l~~~~~ 406 (415)
+++++|.+++.
T Consensus 409 ~~~~~l~~~l~ 419 (420)
T TIGR00700 409 EGLDILCAILA 419 (420)
T ss_pred HHHHHHHHHhh
Confidence 99999998874
No 212
>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.93 E-value=5.8e-23 Score=192.75 Aligned_cols=229 Identities=16% Similarity=0.129 Sum_probs=166.8
Q ss_pred CCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHH----HHhCCCeEEEee
Q 014936 77 AGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELS----AAFRHIEVRHFD 152 (415)
Q Consensus 77 ~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~----~~~~g~~~~~~~ 152 (415)
+....|++.+|++. ..+..+++++|++|+.+++.+++++||+|+++.++|.+.... +...|+++..++
T Consensus 61 Ptv~~lE~~la~le--------g~~~av~~~SG~aAi~~al~all~~GD~VI~~~~~Y~~T~~~~~~~l~~~Gi~v~~vd 132 (432)
T PRK06702 61 PTLAAFEQKLAELE--------GGVGAVATASGQAAIMLAVLNICSSGDHLLCSSTVYGGTFNLFGVSLRKLGIDVTFFN 132 (432)
T ss_pred cHHHHHHHHHHHHh--------CCCcEEEECCHHHHHHHHHHHhcCCCCEEEECCCchHHHHHHHHHHHHHCCCEEEEEC
Confidence 35688999999987 345688999999999999999999999999999999876665 677899988875
Q ss_pred ccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccC
Q 014936 153 LLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFG 232 (415)
Q Consensus 153 ~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~ 232 (415)
. .+|++.++++++++|++|++.+|+||++.+.+ +.+|+++|+++|+++|+|++++... ...+ ..++
T Consensus 133 ~------~~d~~~l~~~I~~~Tk~I~~e~pgnP~~~v~D---i~~I~~iA~~~gi~livD~T~~tP~----~~~p-l~~G 198 (432)
T PRK06702 133 P------NLTADEIVALANDKTKLVYAESLGNPAMNVLN---FKEFSDAAKELEVPFIVDNTLATPY----LCQA-FEHG 198 (432)
T ss_pred C------CCCHHHHHHhCCcCCeEEEEEcCCCccccccC---HHHHHHHHHHcCCEEEEECCCCchh----hCCh-hhcC
Confidence 3 36889999999999999999999999999955 8888999999999999999985211 1111 1233
Q ss_pred CCCCeEEEccCcc-----ccCCCCceE-----EEEEeeCCCCCCCh--------------HHHHHHH--HhhccccCCch
Q 014936 233 STVPILTLGSLSK-----RWIVPGWRL-----GWFVTTDPCGMFRK--------------PKVVERM--KKYFDILGDPA 286 (415)
Q Consensus 233 ~~~~~i~~~s~sK-----~~~~~G~r~-----G~~~~~~~~~~~~~--------------~~~~~~~--~~~~~~~~~~~ 286 (415)
.+ |++.|+|| ..+++|.++ +|...++......+ +.+..+. ..........+
T Consensus 199 AD---Ivv~S~TKy~~Ghsd~l~G~v~~~~~~~w~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~s 275 (432)
T PRK06702 199 AN---IIVHSTTKYIDGHASSLGGIVIDGGNFDWTNGKYPELVEPDPSYHGVSYVQNFGAAAYIVKARVQLLRDYGNCMS 275 (432)
T ss_pred CC---EEEEccccccCCCcceeceEEEeCCCcccccccccccccccccccccchhhccchhhHHHHHHHHHHHHccCCCC
Confidence 33 89999999 444455444 34333221111000 0111111 12233456778
Q ss_pred hHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCC
Q 014936 287 TFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKP 335 (415)
Q Consensus 287 ~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p 335 (415)
+.....+...|+. ++.+.++..++...+.+.|++.|.+..+.+|
T Consensus 276 p~~a~l~~rgL~T-----l~lR~~r~~~Na~~la~~L~~~p~V~~V~yP 319 (432)
T PRK06702 276 PFNAYISNIGLET-----LHLRMERHSENALAVAKWLADHERIEWVNYP 319 (432)
T ss_pred HHHHHHHHhccCc-----HHHHHHHHHHHHHHHHHHHHhCCCcceEECC
Confidence 8888888888876 6777778889999999999988776644444
No 213
>PRK07269 cystathionine gamma-synthase; Reviewed
Probab=99.93 E-value=4.7e-23 Score=191.28 Aligned_cols=291 Identities=15% Similarity=0.144 Sum_probs=197.7
Q ss_pred CCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEE
Q 014936 70 FNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVR 149 (415)
Q Consensus 70 ~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~ 149 (415)
+.+|+. +...+|++++|++. ..+++++++|+++|+.+++. ++++||+|+++.+.|......+...-...
T Consensus 48 Y~R~~~-p~~~~le~~lA~le--------g~~~~v~~~sG~aAi~~~l~-~l~~GD~VI~~~~~yg~~~~~~~~~~~~~- 116 (364)
T PRK07269 48 YTRTKN-PTRAKLEETLAAIE--------SADYALATSSGMSAIVLAFS-VFPVGSKVVAVRDLYGGSFRWFNQQEKEG- 116 (364)
T ss_pred eeCCCC-ccHHHHHHHHHHHh--------CCCeEEEeCCHHHHHHHHHH-HhCCCCEEEEecCCcCchHHHHHHHHhcC-
Confidence 455666 46789999999998 57799999999999999985 56899999999999987665443221110
Q ss_pred EeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCccccc
Q 014936 150 HFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMG 229 (415)
Q Consensus 150 ~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~ 229 (415)
.+.. .+..|++++++++++++++|++++|+||+|.+. ++++|+++|+++|+++|+|++|....+ ..++
T Consensus 117 ~~~~----~~~~d~~~l~~~i~~~TklV~lesP~NPtg~~~---di~~I~~la~~~gi~vvvD~t~~~~~~----~~pl- 184 (364)
T PRK07269 117 RFHF----TYANTEEELIAAIEEDTDIVYIETPTNPLMVEF---DIEKVAKLAHAKGAKVIVDNTFYSPIY----QRPI- 184 (364)
T ss_pred cEEE----EecCCHHHHHHhcCcCceEEEEECCCCCCCeee---CHHHHHHHHHHcCCEEEEECCCccccc----CCch-
Confidence 0110 123588999999999999999999999999884 788888899999999999999754321 1222
Q ss_pred ccCCCCCeEEEccCccccCCCCc-eEEEEEeeCCCCCCChHHHHHHHHhhc-cccCCchhHHHHHHHHhhCCCcHHHHHH
Q 014936 230 VFGSTVPILTLGSLSKRWIVPGW-RLGWFVTTDPCGMFRKPKVVERMKKYF-DILGDPATFIQAAVPSILQQPDEVFFKK 307 (415)
Q Consensus 230 ~~~~~~~~i~~~s~sK~~~~~G~-r~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~a~~~~l~~~~~~~~~~ 307 (415)
....+ +++.|++|.++.+|- =.|++++++ +++.++++... ......++.....+...|+. +..
T Consensus 185 ~~gaD---ivv~S~tK~l~g~~d~~gG~v~~~~-------~~l~~~~~~~~~~~G~~~s~~~a~l~~~~L~t-----L~~ 249 (364)
T PRK07269 185 ELGAD---IVLHSATKYLSGHNDVLAGVVVTND-------LELYEKLFYNLNTTGAVLSPFDSYLLMRGLKT-----LSL 249 (364)
T ss_pred hhCCc---EEEecCceeccCCCcccceEEEeCc-------HHHHHHHHHHHHHhCCCCCHHHHHHHHcCCCc-----HHH
Confidence 22333 889999999765442 357777654 24666665443 22345677777777777765 788
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCccccCCCCCHHHHHHHH---------HhhcCeEEEcCCCCC
Q 014936 308 TLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKL---------AKEESVIILPGTAVG 378 (415)
Q Consensus 308 ~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~l---------l~~~gi~v~~g~~~~ 378 (415)
+.++.++++..+.+.|+..|.+..+.+|..|-.+.+.+... .....++..+ .....+.+.|+..+.
T Consensus 250 r~~~~~~na~~~a~~L~~~p~v~~v~ypg~gg~~sf~~~~~-----~~~~~f~~~l~~~~~~~slG~~~sl~~~p~~~~~ 324 (364)
T PRK07269 250 RMERSTANAQEVVAFLKKSPAVKEVLYTGKGGMISFKVADE-----TRIPHILNSLKVFTFAESLGGVESLITYPTTQTH 324 (364)
T ss_pred HHHHHHHHHHHHHHHHHhCCCccEEeCCCcCcEEEEEECCH-----HHHHHHHHhCCcceEccCCCCcCeEeeCCccccc
Confidence 88888999999999999988766565565554444445310 0122222222 111234444543221
Q ss_pred C-------------CCeEEEEeeCChhhHHHHHHHHHHHH
Q 014936 379 L-------------KNWLRVTFAVDPYSLEECLDRIKSFY 405 (415)
Q Consensus 379 ~-------------~~~iRi~~~~~~~~l~~~l~~l~~~~ 405 (415)
. ++-||+|++.. +.+.+++.|.+++
T Consensus 325 ~~~~~~~r~~~Gi~~~liRlsvGlE--~~~dli~dl~~al 362 (364)
T PRK07269 325 ADIPAEVRHSYGLTDDLLRLSIGIE--DARDLIADLKQAL 362 (364)
T ss_pred ccCCHHHHHhcCCCCCeEEEEeccC--CHHHHHHHHHHHh
Confidence 1 46799999874 5666666666665
No 214
>COG4992 ArgD Ornithine/acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=99.93 E-value=4.5e-23 Score=184.72 Aligned_cols=340 Identities=18% Similarity=0.207 Sum_probs=229.0
Q ss_pred ccCcceeEecccCCCCCCCCC-CcHHHHHHHHHHHhcCC--CCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCC
Q 014936 32 KNEKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLSEK--FNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSG 108 (415)
Q Consensus 32 ~~~~~~i~l~~g~~~~~~~~~-~~~~~~~a~~~~~~~~~--~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g 108 (415)
.+++.++||..|..... ++ .+|.+.++++++++.-. .+.|.++ ...+|-+.+++.. + ..+.++++||
T Consensus 39 ~~G~~YlDf~~Giav~~--lGH~hP~iv~al~~Q~~kl~h~sn~~~~~-~~~~la~~L~~~s------~-~~d~vff~NS 108 (404)
T COG4992 39 QQGREYLDFAAGIAVNN--LGHCHPALVEALKEQAEKLWHVSNLFYNE-PQAELAEKLVELS------P-FADRVFFCNS 108 (404)
T ss_pred CCCCEeeeeccceeeec--cCCCCHHHHHHHHHHHHHhhhcccccCCh-HHHHHHHHHHhhC------c-cccEEEEcCC
Confidence 45889999988874322 33 58999999999877522 2334332 2234444444443 2 3789999999
Q ss_pred hHHHHHHHHHHhcCC-----CCEEEEcCCCCcchHHHHHhCCCeEEEe----eccCCC---CCCCChhHHHhhcCCCceE
Q 014936 109 CTQAIDVAMALLSRP-----GANILLPRPGFPIYELSAAFRHIEVRHF----DLLPDK---GWEVDLDDIESLADQNTVA 176 (415)
Q Consensus 109 ~~~al~~~~~~l~~~-----gd~vi~~~p~y~~~~~~~~~~g~~~~~~----~~~~~~---~~~~~~~~l~~~~~~~~~~ 176 (415)
|+||++.+++...+- ..+|+....+|++-.-.+...+.+..+- |..+.- .| -|+++++++++++|.+
T Consensus 109 GaEA~EaAiKlARk~~~~~~k~~Iia~~nsFHGRT~galS~t~~~ky~~~F~Pl~~g~~~vpf-nDi~al~~ai~~~taA 187 (404)
T COG4992 109 GAEANEAALKLARKYTGDPEKSKIIAFENSFHGRTLGALSATGQPKYRKGFGPLLPGFRHVPF-NDIEALEAAIDEDTAA 187 (404)
T ss_pred cHHHHHHHHHHHHHHcCCCCCcEEEEEcCCcCCccceeeeccCChhhccCCCCCCCCceecCC-CCHHHHHHHhccCeEE
Confidence 999999999986522 1378888888887544443333333111 111110 11 2899999999998887
Q ss_pred EEecCCCCccccC-CCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEE
Q 014936 177 LVIINPGNPCGNV-YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLG 255 (415)
Q Consensus 177 v~i~~p~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G 255 (415)
|++---+...|++ .+.+.++++.++|++||+++|.||++.++..+|+-... ..++-.++ |.++.|. ...|+++|
T Consensus 188 vivEPIQGEgGV~~~~~~fl~~lr~lCd~~g~LLI~DEVQtG~GRTGk~fA~-e~~gV~PD---I~tlaK~-LgGG~Pig 262 (404)
T COG4992 188 VIVEPIQGEGGVIPAPPEFLKALRELCDEHGALLILDEVQTGLGRTGKLFAY-EHYGVEPD---ILTLAKA-LGGGFPIG 262 (404)
T ss_pred EEEecccCCCCCCCCCHHHHHHHHHHHHHhCeEEEEeccccCCCccchHHHH-HHhCCCCC---EEEeecc-ccCCccce
Confidence 7666558888887 56777999999999999999999999998877763321 22222222 3367899 46679999
Q ss_pred EEEeeCCCCCCChHHHHHHHHhhc-cccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhc----CCCCc
Q 014936 256 WFVTTDPCGMFRKPKVVERMKKYF-DILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKE----IPCIS 330 (415)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~----~~~~~ 330 (415)
.+++.. .+.+.+.... ..+++.||++.+++.+.|+...+ ++..++.++.-++|.+.|++ .|-+.
T Consensus 263 A~la~~--------~~~~~~~~G~HgSTfGGNpLacAv~~a~l~~l~~---e~ll~~v~~~g~~~~~~L~~l~~~~~~v~ 331 (404)
T COG4992 263 AMLATE--------EIASAFTPGDHGSTFGGNPLACAVALAVLEVLLE---EGLLENVREKGEYLLQRLRELKRRYPLVK 331 (404)
T ss_pred eeEEch--------hhhhcCCCCcccCCCCcCHHHHHHHHHHHHHHcc---hhHHHHHHHHHHHHHHHHHHHhhcCCcee
Confidence 999864 3444444442 24578899999999888876332 23334444555555555554 43232
Q ss_pred CCCCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEee--CChhhHHHHHHHHHHHHHHH
Q 014936 331 CPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFA--VDPYSLEECLDRIKSFYQRH 408 (415)
Q Consensus 331 ~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~--~~~~~l~~~l~~l~~~~~~~ 408 (415)
....-|+++-+.+.... ...+++..+ .++|+.+.+.. ++.+|+... .+++++++++++|+++++..
T Consensus 332 --~vRG~GLmiGiel~~~~-----~a~~~~~~~-~~~gvL~~~a~----~~ViR~~PpL~i~~eei~~~~~~l~~~l~~~ 399 (404)
T COG4992 332 --EVRGRGLMIGIELKEPY-----RARDIVRAL-REEGVLVLPAG----PNVIRFLPPLVITEEEIDEALDALERALAAA 399 (404)
T ss_pred --eeecceeEEEEEecCcc-----cHHHHHHHH-HHCCeEEecCC----CCeEEecCCccCCHHHHHHHHHHHHHHHHHh
Confidence 24556778777776421 246666665 67799998765 479999994 69999999999999999876
Q ss_pred HH
Q 014936 409 AK 410 (415)
Q Consensus 409 ~~ 410 (415)
..
T Consensus 400 ~~ 401 (404)
T COG4992 400 SA 401 (404)
T ss_pred hh
Confidence 54
No 215
>PRK04366 glycine dehydrogenase subunit 2; Validated
Probab=99.93 E-value=2.5e-22 Score=193.57 Aligned_cols=341 Identities=13% Similarity=0.086 Sum_probs=223.9
Q ss_pred ecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCC---CCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHH
Q 014936 40 LAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGY---APTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVA 116 (415)
Q Consensus 40 l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y---~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~ 116 (415)
.+.|.+. +..++.+.+++.+...-...+.| +...|..++++.+.+++.+..|. +...+..++|+++.+..+
T Consensus 73 ~g~G~~~----~~~~p~i~~~~~~~~~~~~~tpYq~e~~sqG~lel~~~~~~~la~l~G~--~~~~l~~~~GA~a~~~~l 146 (481)
T PRK04366 73 YPLGSCT----MKYNPKINEKVARLPGFAELHPLQPEETVQGALELMYELQEWLKEITGM--DAVTLQPAAGAHGELTGL 146 (481)
T ss_pred ecCcccC----CCCCHHHHHHHHhCcchhcCCCCCChhhhhHHHHHHHHHHHHHHHHhCC--CceEEEeCcHHHHHHHHH
Confidence 4555543 55678888888775221244567 34568889999999999987774 333444455555444422
Q ss_pred --HH-HhcCCCC----EEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccC
Q 014936 117 --MA-LLSRPGA----NILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNV 189 (415)
Q Consensus 117 --~~-~l~~~gd----~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~ 189 (415)
++ .+.++|| +|+++.|+|+.+...++..|++++.++.+ .++.+|+++|++++++++++|++++|+ |||.+
T Consensus 147 ~~~r~~~~~~Gd~~~~~Vlv~~~~hp~~~~~~~~~G~~vv~v~~~--~~~~~D~e~L~~~i~~~t~~V~v~~Pn-~tG~~ 223 (481)
T PRK04366 147 LMIRAYHEARGDTKRTEVIVPDSAHGTNPASAAMAGFKVVEIPSN--EDGLVDLEALKAAVGEDTAALMLTNPN-TLGLF 223 (481)
T ss_pred HHHHHHhhccCcCCCCEEEEcCCccHhHHHHHHHcCCEEEEeecC--CCCCcCHHHHHhhcccCCeEEEEeCCC-Ccccc
Confidence 22 3456676 99999999999999999999999999874 346789999999998899999999998 99965
Q ss_pred CCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCC----CceEEEEEeeCCCCC
Q 014936 190 YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVP----GWRLGWFVTTDPCGM 265 (415)
Q Consensus 190 ~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~----G~r~G~~~~~~~~~~ 265 (415)
..++++|+++|+++|+++++|.++.....+ . .....++.+ +++++.+|+|+.| |..+|++.+++
T Consensus 224 --~~dl~eI~~~a~~~gal~iVD~a~~~~~~g-~--~~~~~~GaD---~~~~~~hK~l~~P~g~Ggp~~G~l~~~~---- 291 (481)
T PRK04366 224 --ERNILEIAEIVHEAGGLLYYDGANLNAILG-K--ARPGDMGFD---VVHLNLHKTFSTPHGGGGPGSGPVGVKE---- 291 (481)
T ss_pred --chHHHHHHHHHHHcCCEEEEEecChhhhcc-c--CCccccCCC---EEEEechhhcCCCCCCCCCCeeeeeehh----
Confidence 357999999999999999999998643221 1 122334443 8888999997644 45578887754
Q ss_pred CChHHHHHHHHhh--------------------ccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhc
Q 014936 266 FRKPKVVERMKKY--------------------FDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKE 325 (415)
Q Consensus 266 ~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 325 (415)
++.+.+... .....+.+.....++..++.....+.+++..++..++.+++.+.|++
T Consensus 292 ----~~~~~lp~~~v~~~g~~~~l~~~r~~~i~r~~a~t~~~l~~~~a~~~l~~~G~~Gl~~~a~~~~~~a~~l~~~L~~ 367 (481)
T PRK04366 292 ----ELAPFLPVPVVEKDGDRYRLDYDRPKSIGRVRAFYGNFGVLVRAYAYIRSLGAEGLREVSEDAVLNANYLKARLKD 367 (481)
T ss_pred ----hhHhhCCCCeeeccCCceeecccccccCCCcccccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHh
Confidence 222222100 00011223344455555555555567778888888889999999988
Q ss_pred CCCCcCCCCCCCc-eEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCC-CCCeEEEEe--eCChhhHHHHHHHH
Q 014936 326 IPCISCPHKPEGS-MAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVG-LKNWLRVTF--AVDPYSLEECLDRI 401 (415)
Q Consensus 326 ~~~~~~~~~p~~g-~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~-~~~~iRi~~--~~~~~~l~~~l~~l 401 (415)
+..+. .+... .-+.+..+.....+. +..++.+.| .++||.+....... ..+.+|+++ .+++++|+.+++.|
T Consensus 368 ~~~~~---~~~~~~~~~~~~~~~~~~~g~-~~~~v~~~L-~~~Gi~~~~~~~p~~~~~~l~is~~e~~t~edid~l~~~l 442 (481)
T PRK04366 368 IYDLP---YDRPCMHEFVLSGKKLKETGV-RTLDIAKRL-LDYGFHPPTIYFPLIVPEALMIEPTETESKETLDAFIAAM 442 (481)
T ss_pred hCccc---CCCCeeEEEEEECccccccCC-CHHHHHHHH-HHCCccCCccccccccCCeEEEcccCCCCHHHHHHHHHHH
Confidence 62332 22111 112222221011111 456666666 56798864211111 257899999 46899999999999
Q ss_pred HHHHHHHHH
Q 014936 402 KSFYQRHAK 410 (415)
Q Consensus 402 ~~~~~~~~~ 410 (415)
+++.++...
T Consensus 443 ~~i~~~~~~ 451 (481)
T PRK04366 443 KQIAEEAKE 451 (481)
T ss_pred HHHHHHHHh
Confidence 999876543
No 216
>PLN02624 ornithine-delta-aminotransferase
Probab=99.93 E-value=6.8e-23 Score=196.92 Aligned_cols=347 Identities=17% Similarity=0.159 Sum_probs=217.9
Q ss_pred ccCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCC--CCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCCh
Q 014936 32 KNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNG--YAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGC 109 (415)
Q Consensus 32 ~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~--y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~ 109 (415)
.+++.++||..|.-.... --.+|.+.+++++++....+.. +. .....+|.+.+++++ ..+.++++++|
T Consensus 72 ~dG~~ylD~~sg~~~~~~-Gh~~p~v~~ai~~ql~~~~~~~~~~~-~~~~~~la~~L~~~~--------~~~~~~f~~SG 141 (474)
T PLN02624 72 PEGKKYLDFLSAYSAVNQ-GHCHPKIIKALTEQAEKLTLSSRAFY-NDKFPEFAEYLTSMF--------GYDMVLPMNTG 141 (474)
T ss_pred CCCCEEEEcccchhcccC-CCCCHHHHHHHHHHHHhcCCcccccC-CHHHHHHHHHHHhhc--------CCCeEEEeCCh
Confidence 347788899777532211 1247999999999988533211 22 233456666666654 24689999999
Q ss_pred HHHHHHHHHHhcC-----C----CC-EEEEcCCCCcchHHHHHhCCCeEEE----eeccCC---CCCCCChhHHHhhcC-
Q 014936 110 TQAIDVAMALLSR-----P----GA-NILLPRPGFPIYELSAAFRHIEVRH----FDLLPD---KGWEVDLDDIESLAD- 171 (415)
Q Consensus 110 ~~al~~~~~~l~~-----~----gd-~vi~~~p~y~~~~~~~~~~g~~~~~----~~~~~~---~~~~~~~~~l~~~~~- 171 (415)
++|++.+++.... + +. .|+....+|++....+.....+... .|..+. -.+ .|++.+++.++
T Consensus 142 seA~e~AlklAr~~~~~~~g~~~~~~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~-~d~~~l~~~l~~ 220 (474)
T PLN02624 142 AEGVETAIKLARKWGYEKKGIPKNEAIIVSCCGCFHGRTLAAISMSCDNEATRGFGPLLPGHLKVDF-GDLDALEKIFEE 220 (474)
T ss_pred HHHHHHHHHHHHHHHHhhcCCCCCCcEEEEECCCcCCCCHHHhhcCCCccccccCCCCCCCceEeCC-CCHHHHHHHHHh
Confidence 9999999986542 1 22 5788888888765544332211100 000000 001 26788888775
Q ss_pred --CCceEEEecCCCCccccCCCHH-HHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccC
Q 014936 172 --QNTVALVIINPGNPCGNVYSYQ-HLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWI 248 (415)
Q Consensus 172 --~~~~~v~i~~p~nptG~~~~~~-~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~ 248 (415)
++..++++..++|++|.+++.+ .+++|.++|++||+++|+||+|.++...|.... ....+....++ ++||.++
T Consensus 221 ~~~~iaaiiiEpv~~~~G~v~p~~~~L~~l~~lc~~~gillI~DEv~tG~GrtG~~~a-~~~~~i~pDiv---~lsK~lg 296 (474)
T PLN02624 221 DGDRIAAFLFEPIQGEAGVVIPPDGYLKAVRELCSKHNVLMIADEIQTGLARTGKMLA-CDWEEVRPDVV---ILGKALG 296 (474)
T ss_pred CCCCEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCcCcCcchhh-HHhcCCCCCEE---Eeccccc
Confidence 3456667777799999987766 599999999999999999999997665554221 11122222233 4689998
Q ss_pred CCCceEEEEEeeCCCCCCChHHHHHHHHhhc-cccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhc--
Q 014936 249 VPGWRLGWFVTTDPCGMFRKPKVVERMKKYF-DILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKE-- 325 (415)
Q Consensus 249 ~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~-- 325 (415)
.+++++|+++.++ ++.+.+.... ..+.+.+++.+.++.+.|+...+. +..++..++.+.+.+.|++
T Consensus 297 gG~~pigav~~~~--------~i~~~~~~~~~~~T~~g~pl~~aaa~aaLe~l~~~---~l~~~~~~~~~~l~~~L~~l~ 365 (474)
T PLN02624 297 GGVIPVSAVLADK--------DVMLCIKPGEHGSTFGGNPLASAVAMAALQVVQDE---KLAERSAKLGQELRDQLQKIQ 365 (474)
T ss_pred CCCCcceeeeecH--------HHHhHhccCCcCCCCCCCHHHHHHHHHHHHHHHhc---hHHHHHHHHHHHHHHHHHHHH
Confidence 8889999999865 5666554332 234467888898888888643221 2333444444444444443
Q ss_pred --CCC-CcCCCCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEe--eCChhhHHHHHHH
Q 014936 326 --IPC-ISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTF--AVDPYSLEECLDR 400 (415)
Q Consensus 326 --~~~-~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~--~~~~~~l~~~l~~ 400 (415)
++. +. . ....|.++.+.++.... +.....++...+ .++||.+.|+. .+++||++ .++++++++++++
T Consensus 366 ~~~~~~i~-~-vrg~G~~~~i~l~~~~~-~~~~a~~~~~~L-~e~GV~v~p~~----~~~lR~~p~l~~t~e~id~~l~~ 437 (474)
T PLN02624 366 KQFPKLIK-E-VRGRGLLNAVVLNSPKL-GPVSAYDVCLKL-KERGLLAKPTH----DTIIRLAPPLSISEDELQECSKA 437 (474)
T ss_pred HhCCCceE-E-EEeeEEEEEEEecCCCc-ChHHHHHHHHHH-HhCCeEEecCC----CCEEEEECCccCCHHHHHHHHHH
Confidence 332 22 1 12335555555543210 001244566664 67899998863 47899997 5789999999999
Q ss_pred HHHHHHHHHHHh
Q 014936 401 IKSFYQRHAKQL 412 (415)
Q Consensus 401 l~~~~~~~~~~~ 412 (415)
|.+++++...++
T Consensus 438 L~~~l~~~~~~~ 449 (474)
T PLN02624 438 LSDVLEHDLPKL 449 (474)
T ss_pred HHHHHHHHHHHh
Confidence 999998866554
No 217
>TIGR01326 OAH_OAS_sulfhy OAH/OAS sulfhydrylase. This model describes a distinct clade of the Cys/Met metabolism pyridoxal phosphate-dependent enzyme superfamily. Members include examples of OAH/OAS sulfhydrylase, an enzyme with activity both as O-acetylhomoserine (OAH) sulfhydrylase (EC 2.5.1.49) and O-acetylserine (OAS) sulphydrylase (EC 2.5.1.47). An alternate name for OAH sulfhydrylase is homocysteine synthase. This model is designated subfamily because it may or may not have both activities.
Probab=99.92 E-value=8.9e-23 Score=193.54 Aligned_cols=234 Identities=18% Similarity=0.142 Sum_probs=163.2
Q ss_pred CCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchH----HHHHhCC
Q 014936 70 FNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYE----LSAAFRH 145 (415)
Q Consensus 70 ~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~----~~~~~~g 145 (415)
+.+|+++ ...+|++.+|++.+ .+..+++++|++++..++.+++++||+|+++.+.|++.. ..+...|
T Consensus 51 ysr~~~p-~~~~le~~lA~l~g--------~~~~v~~~sG~~Ai~~al~~l~~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G 121 (418)
T TIGR01326 51 YSRLMNP-TTDVLEQRIAALEG--------GVAALAVASGQAAITYAILNLAQAGDNIVSSSYLYGGTYNLFKHTLKRLG 121 (418)
T ss_pred eECCCCh-hHHHHHHHHHHHhC--------CCeEEEEccHHHHHHHHHHHHhCCCCEEEEECCCcHHHHHHHHHHHHHcC
Confidence 3455553 46899999999972 357899999999999999999999999999999997543 3456789
Q ss_pred CeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCc
Q 014936 146 IEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPF 225 (415)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~ 225 (415)
+++..++. .|++++++++++++++|++.+|+||+|.+.+ +++|+++|+++|+++|+|++|+.... .
T Consensus 122 ~~v~~v~~-------~d~~~l~~~l~~~t~~V~le~p~NPtg~v~d---l~~I~~la~~~~i~livD~t~~~~~~----~ 187 (418)
T TIGR01326 122 IEVRFVDP-------DDPEEFEKAIDENTKAVFAETIGNPAINVPD---IEAIAEVAHAHGVPLIVDNTFATPYL----C 187 (418)
T ss_pred cEEEEECC-------CCHHHHHHhcCcCCeEEEEECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCchhhc----C
Confidence 99888864 2789999999889999999999999999964 77888889999999999999975321 1
Q ss_pred ccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCC------------------------hHHHH-HHH-Hhhc
Q 014936 226 VPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFR------------------------KPKVV-ERM-KKYF 279 (415)
Q Consensus 226 ~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~------------------------~~~~~-~~~-~~~~ 279 (415)
.++ .. ...+++.|+||.++++|+|+||++++....... +.... +.. ....
T Consensus 188 ~~l-~~---g~Divv~S~sK~l~g~G~~lGg~v~~~~~~~~~~~~~~~~~~~~~~q~a~~~~~~~~~~~~~~~~~~~~~~ 263 (418)
T TIGR01326 188 RPI-DH---GADIVVHSATKYIGGHGTAIGGVIVDGGKFDWANGRFPLFTTPDPSYHGLVFTETFGNPAFIVKARVQLLR 263 (418)
T ss_pred Cch-hc---CCeEEEECccccccCCccceEEEEEecccccccccccccccCCCCccccchhhhhhchhhHHHHHHHHHHH
Confidence 111 11 235899999999999999999999864221100 00000 000 1111
Q ss_pred cccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCC
Q 014936 280 DILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKP 335 (415)
Q Consensus 280 ~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p 335 (415)
......++.....+..-++. +..+.++..++...+.+.|...|++..+.+|
T Consensus 264 ~~G~~~~p~~a~~~~~~l~t-----l~~R~~~~~~~a~~la~~L~~~~~V~~V~yP 314 (418)
T TIGR01326 264 DLGAALSPFNAFLLLQGLET-----LSLRMERHVENALKVAEFLEAHPKVAWVNYP 314 (418)
T ss_pred hcCCCCCHHHHHHHHCCccc-----HHHHHHHHHHHHHHHHHHHHhCCCccEEECC
Confidence 22333444444444333332 4445566666778888888877665544333
No 218
>PRK09792 4-aminobutyrate transaminase; Provisional
Probab=99.92 E-value=2.1e-22 Score=191.25 Aligned_cols=351 Identities=15% Similarity=0.152 Sum_probs=215.6
Q ss_pred ccCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHH
Q 014936 32 KNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQ 111 (415)
Q Consensus 32 ~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~ 111 (415)
.+++.++|+..|.-....+ -.+|.+.+++++++.......+.. ...+.+..+|+.+.+..+ ....+.++++++|++
T Consensus 37 ~dG~~ylD~~~g~~~~~lG-h~~p~v~~ai~~ql~~~~~~~~~~--~~~~~~~~la~~l~~~~p-~~~~~~~~f~~sGse 112 (421)
T PRK09792 37 VEGNEYIDFAAGIAVLNTG-HRHPDLVAAVEQQLQQFTHTAYQI--VPYESYVTLAEKINALAP-VSGQAKTAFFTTGAE 112 (421)
T ss_pred CCCCEEEEccCchhhhcCC-CCCHHHHHHHHHHHHhccCcccCc--cCCHHHHHHHHHHHHhCC-CCCCceEEEeCChHH
Confidence 3588899997775322211 247899999999988643222211 112344455555543222 012258999999999
Q ss_pred HHHHHHHHhcC-CC-CEEEEcCCCCcchHHHHHhC-CC-------------eEEEeeccCCCCCCC----ChhHHHhhcC
Q 014936 112 AIDVAMALLSR-PG-ANILLPRPGFPIYELSAAFR-HI-------------EVRHFDLLPDKGWEV----DLDDIESLAD 171 (415)
Q Consensus 112 al~~~~~~l~~-~g-d~vi~~~p~y~~~~~~~~~~-g~-------------~~~~~~~~~~~~~~~----~~~~l~~~~~ 171 (415)
|++.+++.... .| .+|+....+|++....+... +. .+..++... +...+ +++.+++.++
T Consensus 113 A~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~v~~p~-~~~~~~~~~~~~~l~~~~~ 191 (421)
T PRK09792 113 AVENAVKIARAHTGRPGVIAFSGGFHGRTYMTMALTGKVAPYKIGFGPFPGSVYHVPYPS-DLHGISTQDSLDAIERLFK 191 (421)
T ss_pred HHHHHHHHHHHhcCCCeEEEECCCcCCccHHHHhhcCCCcccccCCCCCCCCcEEcCCCc-ccccccHHHHHHHHHHHHH
Confidence 99999988641 22 57899999998865544322 11 112222211 11111 2467777765
Q ss_pred ----CCceEEEecCC-CCccccCC-CHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCcc
Q 014936 172 ----QNTVALVIINP-GNPCGNVY-SYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSK 245 (415)
Q Consensus 172 ----~~~~~v~i~~p-~nptG~~~-~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK 245 (415)
....+.++..| ++++|..+ |.+.+++|.++|++||+++|+||++.++.+.|.. ..+..++.... +.+++|
T Consensus 192 ~~~~~~~iaavi~EPvq~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~G~~-~a~~~~~~~pD---i~t~gK 267 (421)
T PRK09792 192 SDIEAKQVAAIIFEPVQGEGGFNVAPKELVAAIRRLCDEHGIVMIADEVQSGFARTGKL-FAMDHYADKPD---LMTMAK 267 (421)
T ss_pred hccCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCCch-hHHHhcCCCCc---EEEeeh
Confidence 23345566666 78999865 8999999999999999999999999998776653 33333432222 458899
Q ss_pred ccCCCCceEEEEEeeCCCCCCChHHHHHHHHhh-ccccCCchhHHHHHHHHhhCCCcH-HHHHHHHHHHHHHHHHHHHHh
Q 014936 246 RWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKY-FDILGDPATFIQAAVPSILQQPDE-VFFKKTLNLLKQSVDICYNKI 323 (415)
Q Consensus 246 ~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~a~~~~l~~~~~-~~~~~~~~~~~~~~~~l~~~l 323 (415)
.+ .+|+|+||+++++ ++.+.+... ...+...+++++.++.+.++...+ +.+++.++.-++.++.+.+..
T Consensus 268 ~l-~~G~pigav~~~~--------~i~~~~~~~~~~~T~~gnpl~~aaa~a~l~~l~~~~~~~~~~~~g~~l~~~l~~l~ 338 (421)
T PRK09792 268 SL-AGGMPLSGVVGNA--------NIMDAPAPGGLGGTYAGNPLAVAAAHAVLNIIDKESLCERANQLGQRLKNTLIDAK 338 (421)
T ss_pred hh-cCCCceEEEEEcH--------HHHhccCCCCcCCCCCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHH
Confidence 96 4889999999865 566665433 234567889999977766654322 233333322222222222222
Q ss_pred hcCCCCcCCCCCCC-ceEEEEecCccccC--CCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEee--CChhhHHHHH
Q 014936 324 KEIPCISCPHKPEG-SMAVMLKLNLSLLD--DIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFA--VDPYSLEECL 398 (415)
Q Consensus 324 ~~~~~~~~~~~p~~-g~~~~~~l~~~~~~--~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~--~~~~~l~~~l 398 (415)
+++|.+. .+.+ |+++|+.++..... .......+...+ .++||.+.+... ..+.||+.++ .+++++++++
T Consensus 339 ~~~p~v~---~vrG~Gl~~~ie~~~~~~~~~~~~~~~~l~~~~-~~~Gv~i~~~g~--~~~~irl~P~l~i~~~ei~~~~ 412 (421)
T PRK09792 339 ESVPAIA---AVRGLGSMIAAEFNDPQTGEPSAAIAQKIQQRA-LAQGLLLLTCGA--YGNVIRFLYPLTIPDAQFDAAM 412 (421)
T ss_pred HhCCCcc---eecccceEEEEEecCCccCCcchHHHHHHHHHH-HHCCcEEeecCC--CCCEEEEeCCCcCCHHHHHHHH
Confidence 2354332 4555 99999998642100 001123444444 567999864221 1478999984 6899999999
Q ss_pred HHHHHHHH
Q 014936 399 DRIKSFYQ 406 (415)
Q Consensus 399 ~~l~~~~~ 406 (415)
++|.+++.
T Consensus 413 ~~l~~~l~ 420 (421)
T PRK09792 413 KILQDALS 420 (421)
T ss_pred HHHHHHHh
Confidence 99998874
No 219
>PRK04612 argD acetylornithine transaminase protein; Provisional
Probab=99.92 E-value=2e-22 Score=190.05 Aligned_cols=346 Identities=16% Similarity=0.105 Sum_probs=225.7
Q ss_pred ccCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHH
Q 014936 32 KNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQ 111 (415)
Q Consensus 32 ~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~ 111 (415)
.+|+.++|+..|.-.... --.+|.+.+++++++..... ++.. ...+....+++.+....+ ..+.++++++|++
T Consensus 37 ~dG~~ylD~~~g~~~~~l-Gh~~p~v~~ai~~q~~~~~~--~~~~-~~~~~~~~la~~L~~~~~---~~~~v~f~~sGse 109 (408)
T PRK04612 37 DQGREYLDLAAGIAVCGL-GHNDPDLVAALTEQAGKLWH--TSNV-FYSAPPLKLAEELVTASR---FAEKVFLCNSGTE 109 (408)
T ss_pred CCCCEEEEcCccHhhccC-CCCCHHHHHHHHHHHHhccc--cccc-cCCHHHHHHHHHHHhhCC---CCCEEEEcCchHH
Confidence 358889999877532211 12479999999999875322 1211 123444556666644222 1279999999999
Q ss_pred HHHHHHHHhcC----CC-----CEEEEcCCCCcchHHHHHhCCCeEE-E---eeccCC--CCCCCChhHHHhhcCCCceE
Q 014936 112 AIDVAMALLSR----PG-----ANILLPRPGFPIYELSAAFRHIEVR-H---FDLLPD--KGWEVDLDDIESLADQNTVA 176 (415)
Q Consensus 112 al~~~~~~l~~----~g-----d~vi~~~p~y~~~~~~~~~~g~~~~-~---~~~~~~--~~~~~~~~~l~~~~~~~~~~ 176 (415)
|++.+++.... .| .+|+....+|++....+........ . -+..+. .-...|++.+++.+++++.+
T Consensus 110 A~e~AlklAr~~~~~~g~~~~r~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~a 189 (408)
T PRK04612 110 ANEAAIKLVRKWASSQGRPADKRVIVTFRGSFHGRTLAAVTATAQPKYQEGYEPLPGGFRYVDFNDVEALEAAMAGGDVA 189 (408)
T ss_pred HHHHHHHHHHHHHHhhCCCCCCcEEEEECCCcCCccHHHHHhcCCcccccCCCCCCCCceEcCCCCHHHHHHhhCCCCEE
Confidence 99999987541 12 3689999999987655433211110 0 000000 00013788899888767788
Q ss_pred EEecCCCCccccCCC--HHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceE
Q 014936 177 LVIINPGNPCGNVYS--YQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRL 254 (415)
Q Consensus 177 v~i~~p~nptG~~~~--~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~ 254 (415)
.+++.|.+++|-+++ .+.+++|.++|+++|+++|+||+|.++...|... .. ...+.+..+.++||.++ +|+|+
T Consensus 190 avi~eP~~~~gg~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~---a~-~~~~~~pdi~t~~K~l~-~G~pi 264 (408)
T PRK04612 190 AVMLEPIQGEGGVMPAAPGFLARVRALCDQHDALLVLDEIQCGMGRTGTLF---AH-WQEQVTPDIVTLAKALG-GGFPI 264 (408)
T ss_pred EEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCCchh---hh-hhcCCCCCEEEEcchhc-CCCce
Confidence 899999887776654 6789999999999999999999999876655321 11 11223456778999975 78999
Q ss_pred EEEEeeCCCCCCChHHHHHHHHhh-ccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcC----CCC
Q 014936 255 GWFVTTDPCGMFRKPKVVERMKKY-FDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEI----PCI 329 (415)
Q Consensus 255 G~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~----~~~ 329 (415)
||+++++ ++.+.+... ...+++.+++.+.++.+.|+...+ ++..++++++.+++.+.|+++ +.+
T Consensus 265 ga~~~~~--------~~~~~~~~~~~~~t~~~~p~~~aaa~a~L~~~~~---~~l~~~~~~~g~~l~~~l~~l~~~~~~i 333 (408)
T PRK04612 265 GAMLAGP--------KVAETMQFGAHGTTFGGNPLAAAVARVALRKLAS---PQIAANVARQSAALRAGLEALNAEFGVF 333 (408)
T ss_pred EEEEECH--------HHHhhhcCCCcCCCCCCCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHHHHhhCCCe
Confidence 9999865 566666543 233566789999999998865322 245566666666666666553 222
Q ss_pred cCCCCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEe--eCChhhHHHHHHHHHHHHHH
Q 014936 330 SCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTF--AVDPYSLEECLDRIKSFYQR 407 (415)
Q Consensus 330 ~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~--~~~~~~l~~~l~~l~~~~~~ 407 (415)
. . ...-|.++-+.+.... ......+.. .+.++||.+.+.. .+.+|+.+ ..+++++++++++|.+++.+
T Consensus 334 ~-~-vrg~Gl~~~i~~~~~~---~~~a~~i~~-~l~~~Gvlv~~~g----~~~lRl~Ppl~it~eeid~~l~~l~~~l~~ 403 (408)
T PRK04612 334 A-Q-VRGRGLMLGAVLAPAH---AGQAGAILD-LAAEHGLLLLQAG----PDVLRFVPALNLTDAELADGLARLRLALAD 403 (408)
T ss_pred e-e-eeccceEEEEEecCch---hhHHHHHHH-HHHHCCeEEeeCC----CCEEEEcCCccCCHHHHHHHHHHHHHHHHH
Confidence 2 1 2344666666663210 011334444 4567899997742 37899997 47899999999999999987
Q ss_pred HHH
Q 014936 408 HAK 410 (415)
Q Consensus 408 ~~~ 410 (415)
+.+
T Consensus 404 ~~~ 406 (408)
T PRK04612 404 YVA 406 (408)
T ss_pred Hhh
Confidence 654
No 220
>PRK06084 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.92 E-value=2e-22 Score=190.62 Aligned_cols=232 Identities=18% Similarity=0.177 Sum_probs=166.8
Q ss_pred CCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHh----CCCe
Q 014936 72 GYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAF----RHIE 147 (415)
Q Consensus 72 ~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~----~g~~ 147 (415)
+++. +...+|++.+|++. ..+..+++++|++|+..++.++.++||+|+++.+.|+.....+.. .|++
T Consensus 54 r~~~-pt~~~Le~~lA~l~--------g~~~~l~~ssG~~Ai~~al~al~~~Gd~Vl~~~~~Y~~t~~~~~~~l~~~gi~ 124 (425)
T PRK06084 54 RIMN-PTNDVLEQRVAALE--------GGVGALAVASGMAAITYAIQTIAEAGDNIVSVAKLYGGTYNLLAHTLPRIGIE 124 (425)
T ss_pred CCCC-chHHHHHHHHHHHh--------CCCceeEehhHHHHHHHHHHHHhCCCCEEEEeCCCcchHHHHHHHhcccceeE
Confidence 3344 34678999999987 235677888999999999999999999999999999865554432 4666
Q ss_pred EEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCccc
Q 014936 148 VRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVP 227 (415)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~ 227 (415)
+..++. .|++++++++++++++|++++|+||+|.+++ +++|+++|+++|+++|+|++|+.... ..+
T Consensus 125 v~~~d~-------~d~e~le~ai~~~tklV~lesp~NPtG~v~d---l~~I~~la~~~~i~vVvD~a~a~~~~----~~p 190 (425)
T PRK06084 125 TRFAAH-------DDIAALEALIDERTKAVFCESIGNPAGNIID---IQALADAAHRHGVPLIVDNTVATPVL----CRP 190 (425)
T ss_pred EEEECC-------CCHHHHHHHhccCCcEEEEeCCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCccccc----CCh
Confidence 655542 3899999999889999999999999999976 68888889999999999999985332 112
Q ss_pred ccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCC------------hH--------------HHHHHHH-h-hc
Q 014936 228 MGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFR------------KP--------------KVVERMK-K-YF 279 (415)
Q Consensus 228 ~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~------------~~--------------~~~~~~~-~-~~ 279 (415)
+ .++.+ +++.|++|.++.+|.++|.+++.+....+. ++ ....... . ..
T Consensus 191 ~-~~gaD---ivv~S~tK~l~G~g~~~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 266 (425)
T PRK06084 191 F-EHGAD---IVVHSLTKYIGGHGTSIGGIVVDSGKFPWAEHKERFALLNTPDPSYHGVTYTEAFGPAAFIGRCRVVPLR 266 (425)
T ss_pred h-hcCCC---EEEECchhcccccccceeEEEEeCCccchhhccccccccccCCcccccchhhhhcchHHHHHHHHHHHHH
Confidence 2 22333 889999999999999999988753221000 00 0000000 0 11
Q ss_pred cccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCC
Q 014936 280 DILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKP 335 (415)
Q Consensus 280 ~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p 335 (415)
..+...++.....+..-|+. +..+.++.+++...+.+.|+..|.+..+.+|
T Consensus 267 ~~g~~l~~~~a~l~lrgl~t-----l~~R~~~~~~na~~la~~L~~~p~v~~V~yP 317 (425)
T PRK06084 267 NMGAALSPFNAFLILQGLET-----LALRMERHTENALKVARYLQQHPQVAWVKYA 317 (425)
T ss_pred hcCCCCCHHHHHHHHcCcCc-----HHHHHHHHHHHHHHHHHHHHhCCCccEEECC
Confidence 23455666666666666655 7788888899999999999988776544444
No 221
>TIGR01329 cysta_beta_ly_E cystathionine beta-lyase, eukaryotic. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.92 E-value=8.3e-23 Score=191.19 Aligned_cols=282 Identities=13% Similarity=0.161 Sum_probs=195.8
Q ss_pred cHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHH----HHHhCCCeEEEeecc
Q 014936 79 LPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYEL----SAAFRHIEVRHFDLL 154 (415)
Q Consensus 79 ~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~----~~~~~g~~~~~~~~~ 154 (415)
..++++.+++++ | .+++++++++++++.+++. ++++||+|+++.+.|.++.. .+...|+++..++.
T Consensus 49 ~~~le~~la~l~----g----~~~~l~~~sG~~al~~~l~-ll~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~vd~- 118 (378)
T TIGR01329 49 RTALESLLAKLD----K----ADRAFAFSSGMAALDVITR-LLNNGDEIIAGDDLYGGTDRLLTQVVPRSGVVVVHVDT- 118 (378)
T ss_pred HHHHHHHHHHHh----C----CCcEEEECCHHHHHHHHHH-HhCCCCEEEEcCCCchHHHHHHHHHHHHcCcEEEEeCC-
Confidence 467777777776 2 3567777888889998776 67999999999999987654 34568999988865
Q ss_pred CCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCC
Q 014936 155 PDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGST 234 (415)
Q Consensus 155 ~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~ 234 (415)
.|++.+++++++++++|++++|+||+|.+. ++++|+++|+++|+++|+|++++... ...++ .++.+
T Consensus 119 ------~d~~~le~~i~~~tklv~le~psnptg~v~---dl~~I~~la~~~g~~vivD~a~~~~~----~~~~l-~~g~D 184 (378)
T TIGR01329 119 ------TDLDKVKAALGPKTKLVLLESPTNPLQKIV---DIRKISEMAHAQNALVVVDNTMMSPL----LCNPL-ELGAD 184 (378)
T ss_pred ------CCHHHHHHhcCcCceEEEEECCCCCCCeee---cHHHHHHHHHHcCCEEEEECCCcccc----cCChh-hcCCc
Confidence 278999999998999999999999999995 58888999999999999999985422 22223 22333
Q ss_pred CCeEEEccCccccCC-CCceEEEEEeeCCCCCCChHHHHHHHHhhcc-ccCCchhHHHHHHHHhhCCCcHHHHHHHHHHH
Q 014936 235 VPILTLGSLSKRWIV-PGWRLGWFVTTDPCGMFRKPKVVERMKKYFD-ILGDPATFIQAAVPSILQQPDEVFFKKTLNLL 312 (415)
Q Consensus 235 ~~~i~~~s~sK~~~~-~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~ 312 (415)
+++.|++|.++. .+...|+++++++ .+.++++.... .....++.....+...++. +..+.++.
T Consensus 185 ---i~v~S~tK~l~G~~~~~~G~v~~~~~-------~~~~~~~~~~~~~G~~~~~~~a~l~~~~l~t-----l~~R~e~~ 249 (378)
T TIGR01329 185 ---IVYHSATKFLAGHSDVMAGVLAVKGE-------EIAKKVYFLQNSTGSGLAPFDCWLLLRGIKT-----LAIRIEKQ 249 (378)
T ss_pred ---EEEEecceeccCCccceeEEEEeCcH-------HHHHHHHHHHHhcCCcCCHHHHHHHHccCCC-----HHHHHHHH
Confidence 888999998765 3578899988542 35566655543 2344555554444444443 67777888
Q ss_pred HHHHHHHHHHhhcCCCCcCCCCCC----------------CceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCC
Q 014936 313 KQSVDICYNKIKEIPCISCPHKPE----------------GSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTA 376 (415)
Q Consensus 313 ~~~~~~l~~~l~~~~~~~~~~~p~----------------~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~ 376 (415)
.++...+.+.|++.|.+..+.+|. .|..+.+.+. +.....+++..| +..++.++.|..
T Consensus 250 ~~na~~la~~L~~~~~v~~v~~p~l~~~p~~~l~~~~~~g~~~~~sf~~~-----~~~~~~~~~~~L-~~~~i~~s~G~~ 323 (378)
T TIGR01329 250 QENARAIAMFLSTHPRVKKVRYAGLPSHPGFHLHFSQAKGAGSVLSFETG-----SVALSKRLVEAT-KLFSITVSFGSV 323 (378)
T ss_pred HHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCcceEEEEEEC-----CHHHHHHHHHhC-cCcccccCCCCC
Confidence 888888888888766543233321 2334445552 111244666665 677888877764
Q ss_pred CCC-----------------------CCeEEEEeeCChhhHHHHHHHHHHHHHH
Q 014936 377 VGL-----------------------KNWLRVTFAVDPYSLEECLDRIKSFYQR 407 (415)
Q Consensus 377 ~~~-----------------------~~~iRi~~~~~~~~l~~~l~~l~~~~~~ 407 (415)
... ++.||+|++.. +.+.+++.|++++++
T Consensus 324 ~sl~~~p~~~~~~~~~~~~~~~~gi~~~liR~svGlE--~~~dl~~dl~~al~~ 375 (378)
T TIGR01329 324 NSLISMPCFMSHASIPAEVREERGLPEDLVRLSVGIE--DVDDLISDLDIAFVT 375 (378)
T ss_pred CceeeCCCccccccCCHHHHHhcCCCCCeEEEEeccC--CHHHHHHHHHHHHHh
Confidence 321 36899999874 566667777776653
No 222
>TIGR01324 cysta_beta_ly_B cystathionine beta-lyase, bacterial. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.92 E-value=1.8e-22 Score=188.11 Aligned_cols=284 Identities=13% Similarity=0.117 Sum_probs=196.8
Q ss_pred CcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHH----HHhCCCeEEEeec
Q 014936 78 GLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELS----AAFRHIEVRHFDL 153 (415)
Q Consensus 78 g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~----~~~~g~~~~~~~~ 153 (415)
....|++.+|++. ..+++++++|+++|+..++.+++++||+|+++++.|++.... +...|+++..++.
T Consensus 51 t~~~lE~~lA~l~--------g~~~~~~~~sG~~Ai~~al~all~~GD~Vl~~~~~y~~t~~~~~~~~~~~gi~v~~~d~ 122 (377)
T TIGR01324 51 THFALQDAMCELE--------GGAGCYLYPSGLAAVTNSILAFVKAGDHVLMVDSAYEPTRYFCDIVLKRMGVDITYYDP 122 (377)
T ss_pred cHHHHHHHHHHHh--------CCCcEEEECcHHHHHHHHHHHhcCCCCEEEEcCCCcHHHHHHHHHHHHhcCcEEEEECC
Confidence 3469999999987 356899999999999999999999999999999999876543 3557888776642
Q ss_pred cCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCC
Q 014936 154 LPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS 233 (415)
Q Consensus 154 ~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~ 233 (415)
. +.+.+++++++++++|++.+|+||+|.. .++++|+++|+++|+++|+|++|+..... .++ .++.
T Consensus 123 ~-------~~e~l~~~i~~~tklV~lesp~Np~g~~---~dl~~I~~la~~~g~~livD~t~a~g~~~----~pl-~~ga 187 (377)
T TIGR01324 123 L-------IGEDIATLIQPNTKVLFLEAPSSITFEI---QDIPAIAKAARNPGIVIMIDNTWAAGLLF----KPL-EHGV 187 (377)
T ss_pred C-------CHHHHHHhcCCCceEEEEECCCCCCCcH---HHHHHHHHHHHHcCCEEEEECCCcccccc----Ccc-ccCc
Confidence 1 2378999999999999999999999888 78999999999999999999999874421 122 2333
Q ss_pred CCCeEEEccCccccCCC-CceEEEEEeeCCCCCCChHHHHHHHHhh-ccccCCchhHHHHHHHHhhCCCcHHHHHHHHHH
Q 014936 234 TVPILTLGSLSKRWIVP-GWRLGWFVTTDPCGMFRKPKVVERMKKY-FDILGDPATFIQAAVPSILQQPDEVFFKKTLNL 311 (415)
Q Consensus 234 ~~~~i~~~s~sK~~~~~-G~r~G~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~ 311 (415)
.++++|++|.++.+ +.-.|++++++ +.++.++.. .......++.....+...++. +.-+.++
T Consensus 188 ---Divv~S~tK~l~G~~d~~gG~v~~~~--------~~~~~l~~~~~~~G~~l~p~~a~~~~rgl~t-----l~~R~~~ 251 (377)
T TIGR01324 188 ---DISIQAGTKYLVGHSDIMIGTVVANA--------RTWDQLREHSYLMGQMVDADDAYTTLRGLRT-----LGVRLKQ 251 (377)
T ss_pred ---eEEEecCceeccCCCCceEEEEEeCH--------HHHHHHHHHHHHhCCCCCHHHHHHHHhhhhh-----HHHHHHH
Confidence 38899999998654 46778887654 455555533 233445566655555555543 6667788
Q ss_pred HHHHHHHHHHHhhcCCCCcCCCCCC----------------CceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCC
Q 014936 312 LKQSVDICYNKIKEIPCISCPHKPE----------------GSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGT 375 (415)
Q Consensus 312 ~~~~~~~l~~~l~~~~~~~~~~~p~----------------~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~ 375 (415)
..++...+.+.|++.|.+..+.+|. .|..+.++++.. +.....+++..+ +-.++.++-|.
T Consensus 252 ~~~~a~~la~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~~~g~~~s~~l~~~---~~~~~~~~~~~l-~~~~~~~slG~ 327 (377)
T TIGR01324 252 HQESSLAIAKWLSEQPEVARVLHPALPSCPGHEFWKRDFSGSSGLFSFVLQRL---TQKQVHAFLDHL-QLFGLGYSWGG 327 (377)
T ss_pred HHHHHHHHHHHHHhCCCcCEEECCCCCCCccHHHHHHhccCCCceEEEEECCC---CHHHHHHHHHhC-CcceEeccCCC
Confidence 8888888999998877664444442 233445556420 001223444443 44455544443
Q ss_pred CCC-------------------CCCeEEEEeeCChhhHHHHHHHHHHHHH
Q 014936 376 AVG-------------------LKNWLRVTFAVDPYSLEECLDRIKSFYQ 406 (415)
Q Consensus 376 ~~~-------------------~~~~iRi~~~~~~~~l~~~l~~l~~~~~ 406 (415)
... ..+.||+|++.. +.+.+++.|.++++
T Consensus 328 ~~sl~~~~~~~~~~~~~~~~~~~~~liR~svGlE--~~~dl~~dl~~al~ 375 (377)
T TIGR01324 328 YESLALCNQPELGHRPNIKRNLEGPLIRVHIGLE--NVDDLKADLKAGFE 375 (377)
T ss_pred ccceeecCCCCCCHHHHHhccCCCCEEEEEeCCC--CHHHHHHHHHHHHh
Confidence 211 125699999874 45666666666654
No 223
>PRK06918 4-aminobutyrate aminotransferase; Reviewed
Probab=99.92 E-value=2.2e-22 Score=192.91 Aligned_cols=355 Identities=16% Similarity=0.165 Sum_probs=213.5
Q ss_pred cCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHH
Q 014936 33 NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQA 112 (415)
Q Consensus 33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~a 112 (415)
+|+.++||..|.-....+ -.+|.+.+++++++....+.... ....+.+..+|+.+.+..+.+ ..+.++++++|++|
T Consensus 52 dG~~ylD~~~g~~~~~lG-h~~p~v~~ai~~q~~~~~~~~~~--~~~~~~~~~la~~L~~~~p~~-~~~~v~f~~sGseA 127 (451)
T PRK06918 52 DGNQYIDFAGAIGTINVG-HSHPKVKEALHKQVDQYIHTGFN--VMMYEPYIELAEKLAALAPGS-FDKKVLFLNSGAEA 127 (451)
T ss_pred CCCEEEEcCCchhhcCCC-CCCHHHHHHHHHHHHhccCcccc--ccccHHHHHHHHHHHHhCCCC-CCCEEEEcCCcHHH
Confidence 477899998775322211 24788999999998754321111 111244455555554432211 11589999999999
Q ss_pred HHHHHHHhc--CCCCEEEEcCCCCcchHHHHHhCCCe--------------EEEeeccCC--CCCCCC--------hhHH
Q 014936 113 IDVAMALLS--RPGANILLPRPGFPIYELSAAFRHIE--------------VRHFDLLPD--KGWEVD--------LDDI 166 (415)
Q Consensus 113 l~~~~~~l~--~~gd~vi~~~p~y~~~~~~~~~~g~~--------------~~~~~~~~~--~~~~~~--------~~~l 166 (415)
++.+++... ..-.+|+....+|++....+...... +..+|.... ...+.. ++.+
T Consensus 128 ~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (451)
T PRK06918 128 VENAVKIARKYTKRQGIISFSRGFHGRTLMTMTMTSKVKPYKFGFGPFAPEVYKAPFPYEYRRPEGLTEEQYDDFMIEEF 207 (451)
T ss_pred HHHHHHHHHHHhCCCcEEEECCCcCccchhhhhhcCCCccccccCCCCCCCcEEcCCCccccccccCchHHHHHHHHHHH
Confidence 999998764 12257888999999876655432111 111211100 000110 1223
Q ss_pred Hhhc----CCCceEEEecCCCCc-cccC-CCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEE
Q 014936 167 ESLA----DQNTVALVIINPGNP-CGNV-YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTL 240 (415)
Q Consensus 167 ~~~~----~~~~~~v~i~~p~np-tG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~ 240 (415)
++.+ .+...+.+|..|-+. .|.+ .+.+.+++|.++|++||+++|+||+|.++.+.+.. .++..++.... +
T Consensus 208 ~~~~~~~~~~~~iAavi~EPi~g~gG~~~~~~~~l~~l~~l~~~~gillI~DEV~tg~gr~g~~-~a~~~~~v~pD---i 283 (451)
T PRK06918 208 KNFFISEVAPETIAAVVMEPVQGEGGFIVPSKKFVQEVRNICSEHGILFVADEIQTGFARTGKY-FAIEHFDVVPD---L 283 (451)
T ss_pred HHHHHhhcCCCceEEEEECcccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCcCccCce-ehhHhcCCCCC---E
Confidence 3322 234567788888544 4664 45566999999999999999999999998776642 23344442222 4
Q ss_pred ccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhh-ccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHH
Q 014936 241 GSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKY-FDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDIC 319 (415)
Q Consensus 241 ~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l 319 (415)
.|+||.++ +|+|+||+++++ ++++.+... ...+.+.+++.+.++.+.|+...+..+ .+++++..+++
T Consensus 284 ~t~sK~l~-~G~pig~v~~~~--------~i~~~~~~~~~~~T~~g~~l~~aaa~a~l~~i~~~~~---~~~~~~~g~~l 351 (451)
T PRK06918 284 ITVSKSLG-AGVPISGVIGRK--------EIMDESAPGELGGTYAGSPLGCAAALAVLDIIEKENL---NDRAIELGKVV 351 (451)
T ss_pred Eeeehhhc-CCCccEEEEEcH--------HHHhccCCCCcCcCCCcCHHHHHHHHHHHHHHHHCCH---HHHHHHHHHHH
Confidence 48999976 899999999965 577766543 234567899999997777753222222 22233333333
Q ss_pred HHHhh----cCCCCcCCCCCCCceEEEEecCcc--ccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEee--CCh
Q 014936 320 YNKIK----EIPCISCPHKPEGSMAVMLKLNLS--LLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFA--VDP 391 (415)
Q Consensus 320 ~~~l~----~~~~~~~~~~p~~g~~~~~~l~~~--~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~--~~~ 391 (415)
.+.|+ +.+.+..+ .+.++++.|...... ..++......+... +.++||.+.|+..|+ +++|++++ .++
T Consensus 352 ~~~l~~l~~~~~~~~~v-rg~G~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~Gvlv~~~~~~~--~~lrl~p~l~~t~ 427 (451)
T PRK06918 352 MNRFEEMKNKYNCIGDV-RGLGAMCAFELVQDRKTKEPDKTLTANICKE-ANKRGLLLLSAGTYG--NVIRVLMPLVITD 427 (451)
T ss_pred HHHHHHHHhhCCCceee-ccceeEEEEEEccCCCcCCCcHHHHHHHHHH-HHHCCeEEeecCCCC--CEEEEECCCccCH
Confidence 33333 34333312 455566555433211 01000012233333 466899999986554 78999984 689
Q ss_pred hhHHHHHHHHHHHHHHHHHH
Q 014936 392 YSLEECLDRIKSFYQRHAKQ 411 (415)
Q Consensus 392 ~~l~~~l~~l~~~~~~~~~~ 411 (415)
+++++++++|.++++++..+
T Consensus 428 ~~id~~l~~l~~~l~~~~~~ 447 (451)
T PRK06918 428 EQLEEGLTIIEESLQACYEK 447 (451)
T ss_pred HHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999876443
No 224
>COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase [Amino acid transport and metabolism]
Probab=99.92 E-value=2.3e-22 Score=182.01 Aligned_cols=332 Identities=18% Similarity=0.195 Sum_probs=239.2
Q ss_pred CCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEc
Q 014936 51 FHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLP 130 (415)
Q Consensus 51 ~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~ 130 (415)
.+.++.+++++......+ ..+ .+.++-+.+.+.++..++.. +.+-+++++++|.+++.++.++.+|||+|++.
T Consensus 14 ~~v~~~V~~am~~~~~~h----~s~--~F~~~~~~~~~~L~~v~~t~-~~~~~ll~gsGt~amEAav~sl~~pgdkVLv~ 86 (383)
T COG0075 14 VPVPPRVLLAMARPMVGH----RSP--DFVGIMKEVLEKLRKVFGTE-NGDVVLLSGSGTLAMEAAVASLVEPGDKVLVV 86 (383)
T ss_pred CCCCHHHHHHhcCCCCCC----CCH--HHHHHHHHHHHHHHHHhcCC-CCcEEEEcCCcHHHHHHHHHhccCCCCeEEEE
Confidence 556788888776643321 111 22334444444444333422 23566788889999999999999999999999
Q ss_pred CCCCcc--hHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCC--CceEEEecCCCCccccCCCHHHHHHHHHHHhhcC
Q 014936 131 RPGFPI--YELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ--NTVALVIINPGNPCGNVYSYQHLQKLAETANKLK 206 (415)
Q Consensus 131 ~p~y~~--~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~ 206 (415)
..+.++ +.+.++.+|+++..+... .+-.++++++++.++. ..++|.++|...+||+. .++++|+++|++||
T Consensus 87 ~nG~FG~R~~~ia~~~g~~v~~~~~~--wg~~v~p~~v~~~L~~~~~~~~V~~vH~ETSTGvl---npl~~I~~~~k~~g 161 (383)
T COG0075 87 VNGKFGERFAEIAERYGAEVVVLEVE--WGEAVDPEEVEEALDKDPDIKAVAVVHNETSTGVL---NPLKEIAKAAKEHG 161 (383)
T ss_pred eCChHHHHHHHHHHHhCCceEEEeCC--CCCCCCHHHHHHHHhcCCCccEEEEEeccCccccc---CcHHHHHHHHHHcC
Confidence 888875 567899999999998764 4456899999999984 46788999999999999 67899999999999
Q ss_pred cEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCC-CCceEEEEEeeCCC-----------CCCChHHHHHH
Q 014936 207 TLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIV-PGWRLGWFVTTDPC-----------GMFRKPKVVER 274 (415)
Q Consensus 207 ~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~-~G~r~G~~~~~~~~-----------~~~~~~~~~~~ 274 (415)
.++|+|.+-+. |.....+..++-+ +++.+..|++++ || +|.+..+++. ..++-..+.+.
T Consensus 162 ~l~iVDaVsS~----Gg~~~~vd~wgiD---v~itgSQK~l~~PPG--la~v~~S~~a~e~~~~~~~~~~ylDL~~~~~~ 232 (383)
T COG0075 162 ALLIVDAVSSL----GGEPLKVDEWGID---VAITGSQKALGAPPG--LAFVAVSERALEAIEERKHPSFYLDLKKWLKY 232 (383)
T ss_pred CEEEEEecccC----CCcccchhhcCcc---EEEecCchhccCCCc--cceeEECHHHHHHHhcCCCCceeecHHHHHHH
Confidence 99999999986 3344455556555 777778999865 56 7777765421 22211122222
Q ss_pred HHhhccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCC--CceEEEEecCccccCC
Q 014936 275 MKKYFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPE--GSMAVMLKLNLSLLDD 352 (415)
Q Consensus 275 ~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~--~g~~~~~~l~~~~~~~ 352 (415)
++....+.++++.....++..+|+...++.++.+.++++++.+.+++.++.+ |++.+..+. ......+..|. +
T Consensus 233 ~~~~~~~p~Tppv~~i~aL~~al~~i~~EGle~r~~RH~~~~~a~r~~~~al-Gl~~~~~~~~~s~tvta~~~P~----g 307 (383)
T COG0075 233 MEKKGSTPYTPPVNLIYALREALDLILEEGLEARIARHRRLAEALRAGLEAL-GLELFADPERRSPTVTAIKVPE----G 307 (383)
T ss_pred HhhcCCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHc-CCccccCcccCCCceEEEECCC----C
Confidence 2222233467777777888888887767889999999999999999999998 888553221 11233444554 2
Q ss_pred CCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEe-e-CChhhHHHHHHHHHHHHHHHH
Q 014936 353 IIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTF-A-VDPYSLEECLDRIKSFYQRHA 409 (415)
Q Consensus 353 ~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~-~-~~~~~l~~~l~~l~~~~~~~~ 409 (415)
. ++.+....+++++|+.+.+|........+||+. + .+.+++..++..|..++.++.
T Consensus 308 ~-~~~~~~~~~~~~~g~~i~gg~~~l~gkifRIGhMG~~~~~dv~~~l~ale~~L~~~g 365 (383)
T COG0075 308 V-DDKKVRRALLKEYGVEIAGGQGPLKGKIFRIGHMGNVRPEDVLAALAALEAALRELG 365 (383)
T ss_pred C-CcHHHHHHHHHhCCEEecccccccCccEEEEecCccCCHHHHHHHHHHHHHHHHHcC
Confidence 2 344455578888999999888766678999999 4 678999999999999988753
No 225
>KOG1549 consensus Cysteine desulfurase NFS1 [Amino acid transport and metabolism]
Probab=99.92 E-value=4.1e-23 Score=185.93 Aligned_cols=203 Identities=17% Similarity=0.183 Sum_probs=165.3
Q ss_pred CcceeEecccCCCCCCCCCCcHHHHHHHHHHHhc----CCCCCCC--CCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeC
Q 014936 34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLS----EKFNGYA--PTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTS 107 (415)
Q Consensus 34 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~----~~~~~y~--~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~ 107 (415)
+.+.+.++.+.. .+.+++|.+++.+.+.. .+...|+ ...+.++.|+.+|+++ +.++.+|++|+
T Consensus 41 ~~~~vyld~~at-----~p~~~~Vldam~~~~~~~~~nPh~~~y~w~~~~~~E~aR~~VAklI------nAd~~dIiFts 109 (428)
T KOG1549|consen 41 GTRPVYLDNQAT-----GPMDPRVLDAMLPYLLEYLGNPHSRSYGWKAEDAVEAAREQVAKLI------NADPSDIVFTS 109 (428)
T ss_pred CCccEEEecCcC-----CCCCHHHHHHHHHHHHHhhcCCCccccchhhhHHHHHHHHHHHHHh------CCCCCcEEEeC
Confidence 556777877762 45678999999887653 2211133 3344789999999999 45888899999
Q ss_pred ChHHHHHHHHHHhc-CCCC----EEEEcCCCCcchHHH---HHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEe
Q 014936 108 GCTQAIDVAMALLS-RPGA----NILLPRPGFPIYELS---AAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVI 179 (415)
Q Consensus 108 g~~~al~~~~~~l~-~~gd----~vi~~~p~y~~~~~~---~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i 179 (415)
|+|++++++++... ..+| +|++.+-.|.+.... ++..|+++..+|+. +++-+|++.+++.++++|+++.+
T Consensus 110 ~ATEs~Nlvl~~v~~~~~~~~~k~iitl~~eH~~v~~s~~~l~~~g~~Vt~lpv~--~~~~~d~~~~~~~i~~~T~lv~I 187 (428)
T KOG1549|consen 110 GATESNNLVLKGVARFFGDKTKKHIITLQTEHPCVLDSCRALQEEGLEVTYLPVE--DSGLVDISKLREAIRSKTRLVSI 187 (428)
T ss_pred CchHHHHHHHHHhhccccccccceEEEecccCcchhHHHHHHHhcCeEEEEeccC--ccccccHHHHHHhcCCCceEEEE
Confidence 99999999999975 2455 899999999887665 46679999999986 44568999999999999999999
Q ss_pred cCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEe
Q 014936 180 INPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVT 259 (415)
Q Consensus 180 ~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~ 259 (415)
.+.+|.+|+.+| +++|+.+|+++|+.+++|.+|+- |.-...++.++.+ .+..+.+|+|+.+| +|++++
T Consensus 188 ~~Vnn~~gv~~P---v~EI~~icr~~~v~v~~DaAQav----G~i~vDV~eln~D---~~s~s~HK~ygp~~--iGaLYv 255 (428)
T KOG1549|consen 188 MHVNNEIGVLQP---VKEIVKICREEGVQVHVDAAQAV----GKIPVDVQELNAD---FLSISAHKIYGPPG--IGALYV 255 (428)
T ss_pred EecccCcccccc---HHHHHHHhCcCCcEEEeehhhhc----CCccccHHHcCch---heeeecccccCCCc--ceEEEE
Confidence 999999999955 78888899999999999999997 6666677788776 66678999999999 999999
Q ss_pred eC
Q 014936 260 TD 261 (415)
Q Consensus 260 ~~ 261 (415)
+.
T Consensus 256 r~ 257 (428)
T KOG1549|consen 256 RR 257 (428)
T ss_pred cc
Confidence 75
No 226
>PRK05939 hypothetical protein; Provisional
Probab=99.92 E-value=4.5e-22 Score=186.77 Aligned_cols=226 Identities=16% Similarity=0.104 Sum_probs=164.4
Q ss_pred cHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHH---HHHhCCCeEEEeeccC
Q 014936 79 LPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYEL---SAAFRHIEVRHFDLLP 155 (415)
Q Consensus 79 ~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~---~~~~~g~~~~~~~~~~ 155 (415)
...|++.+|++. ..+..++++++++|+..++.++.++||+|+++++.|++... .+...|+++..++.
T Consensus 49 ~~~lE~~la~le--------g~~~~v~~ssG~~Ai~~~l~all~~Gd~Vv~~~~~y~~t~~~~~~l~~~G~~v~~v~~-- 118 (397)
T PRK05939 49 TAALEAKITKME--------GGVGTVCFATGMAAIAAVFLTLLRAGDHLVSSQFLFGNTNSLFGTLRGLGVEVTMVDA-- 118 (397)
T ss_pred HHHHHHHHHHHh--------CCCeEEEeCCHHHHHHHHHHHHcCCCCEEEECCCccccHHHHHHHHHhcCCEEEEECC--
Confidence 348999999987 23445666677999999999999999999999999976443 45678999888865
Q ss_pred CCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCC
Q 014936 156 DKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTV 235 (415)
Q Consensus 156 ~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~ 235 (415)
.|++++++++++++++|++.+|+||+|.+ .++++|+++|+++|+++|+|++|+... ...+ ..++
T Consensus 119 -----~d~e~l~~~l~~~tklV~vesp~NptG~v---~dl~~I~~la~~~gi~livD~t~a~~~----~~~~-~~~g--- 182 (397)
T PRK05939 119 -----TDVQNVAAAIRPNTRMVFVETIANPGTQV---ADLAGIGALCRERGLLYVVDNTMTSPW----LFRP-KDVG--- 182 (397)
T ss_pred -----CCHHHHHHhCCCCCeEEEEECCCCCCCCH---HhHHHHHHHHHHcCCEEEEECCccccc----ccCc-cccC---
Confidence 37899999999999999999999999999 789999999999999999999986422 1111 1122
Q ss_pred CeEEEccCccccCCCCceEEEEEeeCCCC-------CCC-----h--HHHHHHHHhh--ccccCCchhHHHHHHHHhhCC
Q 014936 236 PILTLGSLSKRWIVPGWRLGWFVTTDPCG-------MFR-----K--PKVVERMKKY--FDILGDPATFIQAAVPSILQQ 299 (415)
Q Consensus 236 ~~i~~~s~sK~~~~~G~r~G~~~~~~~~~-------~~~-----~--~~~~~~~~~~--~~~~~~~~~~~~~a~~~~l~~ 299 (415)
..+++.|+||.++..|.++|++++.+... ... . ......++.. .......++.....+..-|+.
T Consensus 183 aDivv~S~sK~~~g~g~~igg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~p~~a~l~~rgl~t 262 (397)
T PRK05939 183 ASLVINSLSKYIAGHGNALGGAVTDTGLFDWSAYPNIFPAYRKGDPQQWGLTQIRKKGLRDMGATLSSEAAHRIAIGAET 262 (397)
T ss_pred CEEEEecCeecccCCCCeEEEEEecCcccccccccchhhhhhccchhhHHHHHHHHHHHHhcCCCCCHHHHHHHHcCcCc
Confidence 34899999999999999999988753210 000 0 0001122211 123345566666666666654
Q ss_pred CcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCC
Q 014936 300 PDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKP 335 (415)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p 335 (415)
+.-+.++..+++..+.+.|+..|.+..+.+|
T Consensus 263 -----l~~R~~~~~~na~~la~~L~~~p~V~~V~yP 293 (397)
T PRK05939 263 -----LALRVDRSCSNALALAQFLEAHPKVARVYYP 293 (397)
T ss_pred -----HHHHHHHHHHHHHHHHHHHHhCCCccEEECC
Confidence 6677777788999999999988766544454
No 227
>TIGR01885 Orn_aminotrans ornithine aminotransferase. This model describes the final step in the biosynthesis of ornithine from glutamate via the non-acetylated pathway. Ornithine amino transferase takes L-glutamate 5-semialdehyde and makes it into ornithine, which is used in the urea cycle, as well as in the biosynthesis of arginine. This model includes low-GC bacteria and eukaryotic species. The genes from two species are annotated as putative acetylornithine aminotransferases - one from Porphyromonas gingivalis, and the other from Staphylococcus aureus. After homology searching using BLAST it was determined that these two sequences were most closely related to ornithine aminotransferases. This model's seed includes one characterized hit, from Bacillus subtilis.
Probab=99.92 E-value=2.3e-22 Score=191.01 Aligned_cols=334 Identities=17% Similarity=0.155 Sum_probs=216.2
Q ss_pred cCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCC-CCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHH
Q 014936 33 NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKF-NGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQ 111 (415)
Q Consensus 33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~-~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~ 111 (415)
+++.++||..+...... --.+|++.+++++.++.... .......-..++.+.+++++ ..+.++++++|++
T Consensus 35 ~g~~~lD~~s~~~~~~~-Gh~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~--------~~~~~~~~~SGs~ 105 (401)
T TIGR01885 35 EGKRYLDFLSAYSAVNQ-GHCHPKIVKALTEQAQKLTLSSRAFYNDVFGEFAEYVTKLF--------GYDKVLPMNTGAE 105 (401)
T ss_pred CCCEEEEcccCHhhccC-CCCCHHHHHHHHHHHHhccccccccCCHHHHHHHHHHHhhc--------CCCEEEEeCccHH
Confidence 57889999887532111 12479999999998774221 11001223456666666654 2469999999999
Q ss_pred HHHHHHHHhcC---------C-CCEEEEcCCCCcch-HHHHHhCCC------------eEEEeeccCCCCCCCChhHHHh
Q 014936 112 AIDVAMALLSR---------P-GANILLPRPGFPIY-ELSAAFRHI------------EVRHFDLLPDKGWEVDLDDIES 168 (415)
Q Consensus 112 al~~~~~~l~~---------~-gd~vi~~~p~y~~~-~~~~~~~g~------------~~~~~~~~~~~~~~~~~~~l~~ 168 (415)
|+..+++.+.. + .+.|+....+|++. .......+. .+..+++ .|++.+++
T Consensus 106 A~e~ai~~a~~~~~~~~~~~~~~~~i~~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~le~ 178 (401)
T TIGR01885 106 AVETAIKLARKWGYKVKGIPENQAIIVSAKGNFHGRTLGAISMSTDPDSRTNFGPYVPGFKKIPY-------NNLEALEE 178 (401)
T ss_pred HHHHHHHHHHHHhhhhcCCCCCCCEEEEECCCcCcccHHHHhCcCCcccccccCCCCCCceEeCC-------CCHHHHHH
Confidence 99999998521 2 35788888888864 333322221 1222221 26788888
Q ss_pred hcC---CCceEEEecCCCCccccCCC-HHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCc
Q 014936 169 LAD---QNTVALVIINPGNPCGNVYS-YQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLS 244 (415)
Q Consensus 169 ~~~---~~~~~v~i~~p~nptG~~~~-~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~s 244 (415)
.++ ++..++++..+++++|...+ .+.+++|.++|++||+++|+||+|.++.+.|... .....+..++++ ++|
T Consensus 179 ~l~~~~~~~~avi~E~v~~~~G~~~~~~~~l~~l~~l~~~~~~lli~DEv~~g~g~~G~~~-~~~~~~~~~di~---~~g 254 (401)
T TIGR01885 179 ALEDHGPNVCAFIVEPIQGEAGVVVPDDGYLKKVRELCTKHNVLLIADEIQTGLGRTGKLL-CVDHENVKPDIV---LLG 254 (401)
T ss_pred HHHhcCCCEEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchhh-HHhhcCCCCCEE---Eee
Confidence 774 34445555555889999875 4579999999999999999999998766555432 111122222233 467
Q ss_pred cccCCCCceEEEEEeeCCCCCCChHHHHHHHHhh-ccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHh
Q 014936 245 KRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKY-FDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKI 323 (415)
Q Consensus 245 K~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l 323 (415)
|.++.+++|+|++++++ ++++.++.. ...+.+.+++.+.++.++|+...++ ...++++++.+++.+.|
T Consensus 255 K~l~~g~~~ig~v~~~~--------~i~~~~~~~~~~~t~~~~p~~~~aa~a~L~~i~~~---~l~~~~~~~~~~~~~~L 323 (401)
T TIGR01885 255 KALSGGVYPVSAVLADD--------DVMLTIKPGEHGSTYGGNPLACAVAVAALEVLEEE---KLAENAEKLGEIFRDQL 323 (401)
T ss_pred ccccCCCCCcEEEEEcH--------HHHhhccCCCCCCCCCCCHHHHHHHHHHHHHHHhc---cHHHHHHHHHHHHHHHH
Confidence 99887779999999865 577766542 2234556788888888888653222 34467777788899999
Q ss_pred hcCCCCcCC-CCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEe--eCChhhHHHHHHH
Q 014936 324 KEIPCISCP-HKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTF--AVDPYSLEECLDR 400 (415)
Q Consensus 324 ~~~~~~~~~-~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~--~~~~~~l~~~l~~ 400 (415)
++++ ..++ ..+..|.+..+.++.... + .+..++...+ .++||.+.|+. ++.+||++ ..+++++++++++
T Consensus 324 ~~l~-~~~~~~~~g~g~~~~i~~~~~~~-~-~~~~~l~~~l-~~~Gv~v~~~~----~~~lRi~p~l~~t~~~i~~~l~~ 395 (401)
T TIGR01885 324 KKLP-KPIITEVRGRGLLNAIVIDESKT-G-RTAWDLCLKL-KEKGLLAKPTH----GNIIRLAPPLVITEEQLDEGLEI 395 (401)
T ss_pred Hhcc-CCceeEEeecCeeEEEEeccCcc-h-hHHHHHHHHH-HhCCEEEEecC----CCEEEEeCCccCCHHHHHHHHHH
Confidence 8872 2211 122345555555543210 0 1245666665 56799998753 47899998 4789999999999
Q ss_pred HHHHH
Q 014936 401 IKSFY 405 (415)
Q Consensus 401 l~~~~ 405 (415)
|.+++
T Consensus 396 l~~~l 400 (401)
T TIGR01885 396 IKKVI 400 (401)
T ss_pred HHHHh
Confidence 98765
No 228
>TIGR02379 ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase. This family consists of TDP-4-keto-6-deoxy-D-glucose transaminases, the WecE (formerly RffA) protein of enterobacterial common antigen (ECA) biosynthesis, from enterobacteria. It also includes closely matching sequence from species not expected to make ECA, but which contain other genes for the biosynthesis of TDP-4-keto-6-deoxy-D-Glc, an intermediate in the biosynthesis of other compounds as well and the substrate of WecA. This family belongs to the DegT/DnrJ/EryC1/StrS aminotransferase family (pfam01041).
Probab=99.92 E-value=8.9e-22 Score=183.96 Aligned_cols=309 Identities=21% Similarity=0.273 Sum_probs=197.8
Q ss_pred cHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHh-cCCCCEEEEcCC
Q 014936 54 THVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALL-SRPGANILLPRP 132 (415)
Q Consensus 54 ~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l-~~~gd~vi~~~p 132 (415)
.+.-++++.+.+..+.+. +. .++++++++++.+.. ..+++++|+|+++++.+++.++ .++||+|+++.+
T Consensus 10 ~~~e~~a~~~~~~~~~~~--~~----g~~~~~~e~~la~~~----g~~~~v~~~sgt~aL~~~l~al~~~pGd~Viv~~~ 79 (376)
T TIGR02379 10 TGQELEYIAEAISEGKLS--GD----GPFSRRCETWLENRT----GTKKALLTPSCTAALEMAALLLDIQPGDEVIMPSY 79 (376)
T ss_pred CHHHHHHHHHHHHcCCcc--CC----cHHHHHHHHHHHHHh----CCCeEEEeCCHHHHHHHHHHHcCCCCcCEEEECCC
Confidence 455688888888765432 11 234444444444332 3578999999999999999887 789999999999
Q ss_pred CCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEc
Q 014936 133 GFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIAD 212 (415)
Q Consensus 133 ~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D 212 (415)
+|..+...+...|++++.+++++ +++.+|++++++++++++++|+ |+||+|... ++.+|.++|+++|+++|+|
T Consensus 80 t~~~~~~~~~~~G~~~v~vd~d~-~~~~~d~~~le~~i~~~tk~Ii---p~~~~G~~~---d~~~I~~la~~~~i~vIeD 152 (376)
T TIGR02379 80 TFVSTANAFVLRGAKIVFVDIRP-DTMNIDETLIESAITHRTKAIV---PVHYAGVAC---DMDTIMALANKHQLFVIED 152 (376)
T ss_pred CcHHHHHHHHHcCCEEEEEecCC-CcCCCCHHHHHHhcCcCceEEE---EeCCCCCcc---CHHHHHHHHHHCCCEEEEE
Confidence 99999888899999999999875 3477999999999988888876 566789885 4678888899999999999
Q ss_pred cccCCcc-cCCCCcccccccCCCCCeEEEccCc--cccCCCCceEEEEEeeCCCCCCChHHHHHHHHhhcccc-------
Q 014936 213 EVYGHLV-FGDKPFVPMGVFGSTVPILTLGSLS--KRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDIL------- 282 (415)
Q Consensus 213 e~~~~~~-~~~~~~~~~~~~~~~~~~i~~~s~s--K~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~------- 282 (415)
++|+.+. +.+... ..+.. +.+.||+ |.+ .+|.+.|++++++ +++.++++......
T Consensus 153 aa~~~g~~~~~~~~---g~~~~----~~~fSf~~~K~l-~~g~~gG~v~~~~-------~~~~~~~~~~~~~g~~~~~~~ 217 (376)
T TIGR02379 153 AAQGVMSTYKGRAL---GSIGH----LGTFSFHETKNY-TSGGEGGALLIND-------QAFIERAEIIREKGTNRSQFF 217 (376)
T ss_pred CccccCCccCCccc---CCCCC----EEEEeCCCCCcC-cccCCceEEEECC-------HHHHHHHHHHHHhCCCCcccc
Confidence 9999865 544322 22221 3333433 663 5677889998875 35666666543211
Q ss_pred ---------------CCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCC--C-CcCCCCCCC---c-eE
Q 014936 283 ---------------GDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIP--C-ISCPHKPEG---S-MA 340 (415)
Q Consensus 283 ---------------~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~--~-~~~~~~p~~---g-~~ 340 (415)
...+.+....+...| +.+++..++.+++.+...+.|..++ + +.....|.+ . .+
T Consensus 218 ~~~~~~~~~~~~g~n~~~~~~~Aa~g~~qL-----~~l~~~~~~r~~~~~~y~~~L~~~~~~~~~~~~~~~~~~~~~~~~ 292 (376)
T TIGR02379 218 RGEVDKYTWRDIGSSYLPSELQAAYLWAQL-----EQADRINQDRLATWQLYQDALKPLEEKGIIELPSIPNGCQHNAHM 292 (376)
T ss_pred ccCCCcceeeeecccCCccHHHHHHHHHHH-----HHhHHHHHHHHHHHHHHHHHhccCCcCCeeeCCCCCCCCeeeeEE
Confidence 011112211111223 3355555666666666666666543 1 221111222 1 23
Q ss_pred EEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCC----------CC------------CCeEEEEe--eCChhhHHH
Q 014936 341 VMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAV----------GL------------KNWLRVTF--AVDPYSLEE 396 (415)
Q Consensus 341 ~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~----------~~------------~~~iRi~~--~~~~~~l~~ 396 (415)
+++.++.. .+..++... |+++||.+.++... .. ...+.+-+ ..++++++.
T Consensus 293 ~~i~~~~~-----~~r~~l~~~-L~~~gI~~~~~~~p~~~~~~~~~~~~~~~~~p~~~~~~~~~l~LP~~~~l~~~~~~~ 366 (376)
T TIGR02379 293 FYIKLKDE-----DDRNELIKY-LKEQEIMAVFHYVPLHSSPAGRYFGRFHGEDIYTTKESERLVRLPLYYGLSKEDQAR 366 (376)
T ss_pred EEEEECCc-----CCHHHHHHH-HHHCCCCccccCcCCCcchhHHhhCCCCCCChHHHHHHhceEEccCCCCCCHHHHHH
Confidence 34555431 134455555 47789987643210 00 12355555 368899999
Q ss_pred HHHHHHHHH
Q 014936 397 CLDRIKSFY 405 (415)
Q Consensus 397 ~l~~l~~~~ 405 (415)
.++.|++++
T Consensus 367 i~~~i~~~~ 375 (376)
T TIGR02379 367 VIQTICDYL 375 (376)
T ss_pred HHHHHHHHh
Confidence 999988754
No 229
>PRK06777 4-aminobutyrate aminotransferase; Provisional
Probab=99.92 E-value=3.9e-22 Score=189.37 Aligned_cols=348 Identities=17% Similarity=0.169 Sum_probs=218.6
Q ss_pred ccCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHH
Q 014936 32 KNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQ 111 (415)
Q Consensus 32 ~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~ 111 (415)
.+|+.++|+..|.-.... --.+|.+.+++++++.+.....+.. ...+.+..+|+.+.+..+ .-..+.++++++|++
T Consensus 37 ~dG~~ylD~~~g~~~~~l-Gh~~p~v~~ai~~ql~~~~~~~~~~--~~~~~~~~la~~l~~~~p-~~~~~~~~f~~sGse 112 (421)
T PRK06777 37 VEGREYIDFAAGIAVLNT-GHRHPKVVAAVRQQLDQFTHTAYQI--VPYASYVTLAERINALAP-IDGPAKTAFFTTGAE 112 (421)
T ss_pred CCCCEEEEcccCHHhhcc-CCCCHHHHHHHHHHHhhcccccccc--cCChHHHHHHHHHHHhCC-CCCCceEEEeCCcHH
Confidence 358889999877522111 1247889999999988643322211 112233344444443221 012468999999999
Q ss_pred HHHHHHHHhcC-CC-CEEEEcCCCCcchHHHHHhC-CCe-------------EEEeeccCCCCCC----CChhHHHhhcC
Q 014936 112 AIDVAMALLSR-PG-ANILLPRPGFPIYELSAAFR-HIE-------------VRHFDLLPDKGWE----VDLDDIESLAD 171 (415)
Q Consensus 112 al~~~~~~l~~-~g-d~vi~~~p~y~~~~~~~~~~-g~~-------------~~~~~~~~~~~~~----~~~~~l~~~~~ 171 (415)
|++.+++.... .| .+|+....+|++....+... +.. +..++. ++.... .+++.+++.++
T Consensus 113 A~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~t~~~~~~~~~~~~~~~~~~~~~~-p~~~~~~~~~~~~~~l~~~~~ 191 (421)
T PRK06777 113 AVENAVKIARAYTGRPGVIAFGGAFHGRTLLTMALTGKVAPYKVGFGPFPGSIFHALY-PNELHGVSVEEALSSVERLFK 191 (421)
T ss_pred HHHHHHHHHHHhhCCCeEEEEcCCcCCccHHHHhhcCCCcccccCCCCCCCCcEEcCC-CccccCcCHHHHHHHHHHHHH
Confidence 99999987641 22 47889999999876655432 210 011111 100000 12556777664
Q ss_pred ----CCceEEEecCC-CCcccc-CCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCcc
Q 014936 172 ----QNTVALVIINP-GNPCGN-VYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSK 245 (415)
Q Consensus 172 ----~~~~~v~i~~p-~nptG~-~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK 245 (415)
+...+.++..| ++..|. ++|.+.+++|.++|++||+++|.||+|.++.+.+.. .....++....++ ++||
T Consensus 192 ~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~g~~-~~~~~~~~~pDiv---~~sK 267 (421)
T PRK06777 192 ADIAPDQVAAILLEPIQGEGGFNVAPPEFMSALRTLCDEHGILLIADEVQTGFARTGKL-FAMEYYDVKPDLI---TMAK 267 (421)
T ss_pred hccCCCceEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCccCCch-hhhhhcCCCCCEE---eeeh
Confidence 23345566677 667785 588999999999999999999999999987766642 2233333323333 7899
Q ss_pred ccCCCCceEEEEEeeCCCCCCChHHHHHHHHhh-ccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhh
Q 014936 246 RWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKY-FDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIK 324 (415)
Q Consensus 246 ~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~ 324 (415)
.++ +|+|+||+++++ ++++.+... ...+.+.+++++.++.+.|+...+ ++..++++++.+++.+.|+
T Consensus 268 ~l~-~G~pigav~~~~--------~i~~~~~~~~~~~T~~~~p~~~aaa~a~L~~~~~---~~l~~~~~~~g~~l~~~L~ 335 (421)
T PRK06777 268 SLG-GGMPISAVVGRA--------EVMDAPAPGGLGGTYAGNPLAVAAALAVLDVIAE---EKLCQRALILGAHLVEVLE 335 (421)
T ss_pred hhc-CCCceEEEEEcH--------HHHhccCCCCCCCCCCcCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHH
Confidence 987 899999999965 576666543 234567899999999999864321 3456666677777777666
Q ss_pred cC----CCCcCCCCCCCceEEEEecCccccCCCCCHHHHHHHH---HhhcCeEEEcCCCCCCCCeEEEEe--eCChhhHH
Q 014936 325 EI----PCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKL---AKEESVIILPGTAVGLKNWLRVTF--AVDPYSLE 395 (415)
Q Consensus 325 ~~----~~~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~l---l~~~gi~v~~g~~~~~~~~iRi~~--~~~~~~l~ 395 (415)
++ |.+. ...+.+. ++.+.+..... +. ++.++...+ +.++||.+.|+..|+ +++||.+ ..++++++
T Consensus 336 ~l~~~~~~i~-~vrg~G~-~~~i~~~~~~~-~~-~~~~~~~~l~~~~~~~Gv~i~~~~~~g--~~lr~~ppl~i~~~~i~ 409 (421)
T PRK06777 336 KAKASCPAIV-DIRARGS-MVAVEFNDPQT-GK-PSPEFTRQYQRQALEEGLLLLSCGVHG--NVIRFLYPLTIPDAQFS 409 (421)
T ss_pred HHHHhCCCeE-EecCceE-EEEEEEecCcc-CC-ccHHHHHHHHHHHHhCCeEEeecCCCC--CEEEEeCCCCCCHHHHH
Confidence 53 4333 2244544 44444432110 11 122222222 456899999987654 6899999 47899999
Q ss_pred HHHHHHHHHHH
Q 014936 396 ECLDRIKSFYQ 406 (415)
Q Consensus 396 ~~l~~l~~~~~ 406 (415)
+++++|.+++.
T Consensus 410 ~~~~~l~~~l~ 420 (421)
T PRK06777 410 KALNILTRLLA 420 (421)
T ss_pred HHHHHHHHHHh
Confidence 99999998864
No 230
>PRK08064 cystathionine beta-lyase; Provisional
Probab=99.92 E-value=7e-22 Score=185.74 Aligned_cols=281 Identities=15% Similarity=0.146 Sum_probs=187.6
Q ss_pred CcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchH----HHHHhCCCeEEEeec
Q 014936 78 GLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYE----LSAAFRHIEVRHFDL 153 (415)
Q Consensus 78 g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~----~~~~~~g~~~~~~~~ 153 (415)
...++++.+|++.+ .+ +. +++++|+.++.+++. +.++||+|+++.|.|++.. ..++..|+++..++.
T Consensus 55 ~~~~le~~lA~l~g------~~-~~-v~~~sG~~ai~~~l~-~l~~Gd~Vlv~~~~y~~~~~~~~~~~~~~G~~v~~v~~ 125 (390)
T PRK08064 55 TREALEDIIAELEG------GT-KG-FAFASGMAAISTAFL-LLSKGDHVLISEDVYGGTYRMITEVLSRFGIEHTFVDM 125 (390)
T ss_pred hHHHHHHHHHHHhC------CC-Ce-EEECCHHHHHHHHHH-HhCCCCEEEEccCccchHHHHHHHHHHHcCCEEEEECC
Confidence 46789999999873 23 34 555666788888886 6689999999999998544 345668999988865
Q ss_pred cCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCC
Q 014936 154 LPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS 233 (415)
Q Consensus 154 ~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~ 233 (415)
.|++.+++.+++++++|++++|+||||.+. ++++|.++|+++|+++|+|++|+.+... .++ .++.
T Consensus 126 -------~d~~~l~~~l~~~tklV~l~~p~NptG~~~---dl~~I~~la~~~g~~vvvD~a~~~~~~~----~~~-~~g~ 190 (390)
T PRK08064 126 -------TNLEEVAQNIKPNTKLFYVETPSNPLLKVT---DIRGVVKLAKAIGCLTFVDNTFLTPLLQ----KPL-DLGA 190 (390)
T ss_pred -------CCHHHHHHhcCCCceEEEEECCCCCCcEec---cHHHHHHHHHHcCCEEEEECCCCccccc----Cch-hhCC
Confidence 268999999988999999999999999995 5778888888999999999998764321 112 2232
Q ss_pred CCCeEEEccCccccCC-CCceEEEEEeeCCCCCCChHHHHHHHHhhccc-cCCchhHHHHHHHHhhCCCcHHHHHHHHHH
Q 014936 234 TVPILTLGSLSKRWIV-PGWRLGWFVTTDPCGMFRKPKVVERMKKYFDI-LGDPATFIQAAVPSILQQPDEVFFKKTLNL 311 (415)
Q Consensus 234 ~~~~i~~~s~sK~~~~-~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~ 311 (415)
.+++.|++|.++. +|.-.|++++.+ +++.+.++..... ....++.....+..-+ +.+..+.++
T Consensus 191 ---Divv~S~tK~~~G~~~~laG~~v~~~-------~~~~~~l~~~~~~~g~~~~~~~a~l~~~gl-----~tl~~R~~~ 255 (390)
T PRK08064 191 ---DVVLHSATKFLAGHSDVLAGLAVVKD-------EELAQKLYFLQNSFGAVLGVQDCWLVLRGL-----KTLHVRLEH 255 (390)
T ss_pred ---cEEEeecceeccCCccceeEEEEeCC-------HHHHHHHHHHHHhcCCCCCHHHHHHHHccc-----CcHHHHHHH
Confidence 3788999999764 445678777653 2577777666442 2333333333332223 336777788
Q ss_pred HHHHHHHHHHHhhcCCCCcCCCCCC----------------CceEEEEecCccccCCCCCHHHHHHHHHhhcCe---EEE
Q 014936 312 LKQSVDICYNKIKEIPCISCPHKPE----------------GSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESV---IIL 372 (415)
Q Consensus 312 ~~~~~~~l~~~l~~~~~~~~~~~p~----------------~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi---~v~ 372 (415)
..+++..+.+.|++.|.+..+.+|. .|..+.+.++ + .+.+..++...++ .++
T Consensus 256 ~~~~a~~la~~L~~~~~v~~v~yp~l~~~p~~~~~~~~~~g~gg~~sf~~~--------~-~~~~~~f~~~l~l~~~~~s 326 (390)
T PRK08064 256 SSETANKIALYLQEHPKVQNVYYPGLQTHLGFDIQQSQATSAGAVLSFTLQ--------S-EEAVRQFVSHVKLPVFAVS 326 (390)
T ss_pred HHHHHHHHHHHHhcCCCcceEECCCCCCCccHHHHHHhCCCcceEEEEEEC--------C-HHHHHHHHHhCCcceEccc
Confidence 8888888899998776544333331 2334444553 1 2234455566666 455
Q ss_pred cCCC------------CC----------C-CCeEEEEeeCChhhHHHHHHHHHHHHHHH
Q 014936 373 PGTA------------VG----------L-KNWLRVTFAVDPYSLEECLDRIKSFYQRH 408 (415)
Q Consensus 373 ~g~~------------~~----------~-~~~iRi~~~~~~~~l~~~l~~l~~~~~~~ 408 (415)
-|.. +. . ++.+|+|++.. +.+..++.|.+++++.
T Consensus 327 ~G~~~sl~~~~~~~~h~~~~~~~~~~~gi~~~liR~SvGle--~~~dli~dl~~Al~~~ 383 (390)
T PRK08064 327 LGAVESILSYPAKMSHAAMPKEERDERGITDGLLRLSVGLE--NVDDLIADFEQALSYV 383 (390)
T ss_pred CCCCcceeECCcccccccCCHHHHHhcCCCCCeEEEEeccC--CHHHHHHHHHHHHHhc
Confidence 5521 11 1 46799999863 4455555666565543
No 231
>PRK00062 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.92 E-value=1.5e-22 Score=192.86 Aligned_cols=347 Identities=19% Similarity=0.103 Sum_probs=215.8
Q ss_pred ccCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHH
Q 014936 32 KNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQ 111 (415)
Q Consensus 32 ~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~ 111 (415)
.+++.++||..|.+....+. .+|.+.+++.+++..... .|.+..+..+|.+.+++.+ . ..+.+++++||++
T Consensus 47 ~dG~~~lD~~~g~~~~~lGh-~~p~i~~a~~~~~~~~~~-~~~~~~~~~~la~~L~~~~----~---~~~~v~~~~sGse 117 (426)
T PRK00062 47 VDGNEYIDYVGSWGPMILGH-AHPEVVEAVIEAAEKGLS-FGAPTELEVELAELVIELV----P---SIEMVRMVNSGTE 117 (426)
T ss_pred CCCCEEEEcccchhhhhcCC-CCHHHHHHHHHHHHhCCc-CCCCCHHHHHHHHHHHHhC----C---CCCEEEEecCHHH
Confidence 35889999998865433222 679999999999886432 3344445556666666654 1 3578999999999
Q ss_pred HHHHHHHHhcC--CCCEEEEcCCCCcchHHHHHhC-CC-------eE-----EEeeccCCCCCCCChhHHHhhcCC--Cc
Q 014936 112 AIDVAMALLSR--PGANILLPRPGFPIYELSAAFR-HI-------EV-----RHFDLLPDKGWEVDLDDIESLADQ--NT 174 (415)
Q Consensus 112 al~~~~~~l~~--~gd~vi~~~p~y~~~~~~~~~~-g~-------~~-----~~~~~~~~~~~~~~~~~l~~~~~~--~~ 174 (415)
|+..+++.... ..++|+..+++|+++...+... |. .. ..+..........|++.+++.++. ..
T Consensus 118 A~e~Aik~a~~~~g~~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~ 197 (426)
T PRK00062 118 ATMSAIRLARGYTGRDKIIKFEGCYHGHADSLLVKAGSGAATLGLPDSPGVPEDFAKHTLTAPYNDLEAVEELFEEYGDE 197 (426)
T ss_pred HHHHHHHHHHHHhCCCeEEEEcCccCCchhhhhhccCccccccCCCCCCCCCcccccceEEcCCCCHHHHHHHHHhCCCc
Confidence 99999998542 2578999999999976444322 10 00 000000000001368888877742 23
Q ss_pred eEEEecCC-CCccccCCC-HHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCc
Q 014936 175 VALVIINP-GNPCGNVYS-YQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGW 252 (415)
Q Consensus 175 ~~v~i~~p-~nptG~~~~-~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~ 252 (415)
.+.+++.| ...+|.+.+ .+.+++|.++|++||+++|+||+|.++.. +.. .....++..+. +.++||.++ .|+
T Consensus 198 ~aaiivEpv~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~G~r~-g~~-~~~~~~~~~pD---i~~~gK~l~-~G~ 271 (426)
T PRK00062 198 IAAVIVEPVAGNMGVVPPKPGFLEGLRELCDEHGALLIFDEVMTGFRV-ALG-GAQGYYGVTPD---LTTLGKIIG-GGL 271 (426)
T ss_pred EEEEEEeCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeechhcccc-CCc-cHHHHhCCCcc---hHhhhhHhh-CCC
Confidence 34455555 445787765 88899999999999999999999997733 321 11112222111 458899976 789
Q ss_pred eEEEEEeeCCCCCCChHHHHHHHHhh----ccccCCchhHHHHHHHHhhCCCcH-HHHHHHHHHHHHHHHHHHHHhhcCC
Q 014936 253 RLGWFVTTDPCGMFRKPKVVERMKKY----FDILGDPATFIQAAVPSILQQPDE-VFFKKTLNLLKQSVDICYNKIKEIP 327 (415)
Q Consensus 253 r~G~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~a~~~~l~~~~~-~~~~~~~~~~~~~~~~l~~~l~~~~ 327 (415)
++|++++++ ++.+.+... ...+.+.+++.+.++.+.|+...+ +..++..+.....++.+.+..++.
T Consensus 272 p~ga~~~~~--------~i~~~~~~~~~~~~~~T~~~~p~~~aaa~a~L~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~- 342 (426)
T PRK00062 272 PVGAFGGRR--------EIMEQLAPLGPVYQAGTLSGNPLAMAAGLATLKLLKEPGFYEELEALTKRLAEGLKEAAKKA- 342 (426)
T ss_pred cceeeeEHH--------HHHHhhccCCCceecccCcCCHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHc-
Confidence 999998865 677777422 122456788899888888865322 234444444444444444444445
Q ss_pred CCcCCCCCCCceEEEEecCccccCC-----CCC---HHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEeeCChhhHHHHHH
Q 014936 328 CISCPHKPEGSMAVMLKLNLSLLDD-----IID---DIDFCFKLAKEESVIILPGTAVGLKNWLRVTFAVDPYSLEECLD 399 (415)
Q Consensus 328 ~~~~~~~p~~g~~~~~~l~~~~~~~-----~~~---~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~~~l~~~l~ 399 (415)
++. ......|.++-+.+....... ..+ ...+...+ .++||.+.|.. .+.+++++..++++++++++
T Consensus 343 ~~~-~~vrg~G~~~~i~l~~~~~~~~~~~~~~~~~~~~~i~~~l-~~~Gv~v~~~~----~~~~~~~~~~t~~ei~~~~~ 416 (426)
T PRK00062 343 GIP-LTVNRVGSMFGLFFTDEPVTNYADAKKSDTERFARFFHAM-LDEGVYLAPSQ----FEAGFVSAAHTDEDIEKTLE 416 (426)
T ss_pred CCc-eEEEEecceEEEEEecCCCcchhhhccccHHHHHHHHHHH-HHCCeEeecCC----cCceeeeccCCHHHHHHHHH
Confidence 333 112334555555553211000 001 13455444 56799998743 24567888889999999999
Q ss_pred HHHHHHHHH
Q 014936 400 RIKSFYQRH 408 (415)
Q Consensus 400 ~l~~~~~~~ 408 (415)
+|.++++++
T Consensus 417 ~l~~~l~~~ 425 (426)
T PRK00062 417 AARKAFAAL 425 (426)
T ss_pred HHHHHHHhh
Confidence 999988753
No 232
>cd00616 AHBA_syn 3-amino-5-hydroxybenzoic acid synthase family (AHBA_syn). AHBA_syn family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The members of this CD are involved in various biosynthetic pathways for secondary metabolites. Some well studied proteins in this CD are AHBA_synthase, protein product of pleiotropic regulatory gene degT, Arnb aminotransferase and pilin glycosylation protein. The prototype of this family, the AHBA_synthase, is a dimeric PLP dependent enzyme. AHBA_syn is the terminal enzyme of 3-amino-5-hydroxybenzoic acid (AHBA) formation which is involved in the biosynthesis of ansamycin antibiotics, including rifamycin B. Some members of this CD are involved in 4-amino-6-deoxy-monosaccharide D-perosamine synthesis. Perosamine is an important element in the glycosylation of several cell products, such as antibiotics and lipopolysaccharides of gram-positive and gram-negative bacteria. The pilin glycosylation protein
Probab=99.91 E-value=7.8e-22 Score=184.77 Aligned_cols=302 Identities=19% Similarity=0.178 Sum_probs=202.5
Q ss_pred HHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHh-cCCCCEEEEcCCCCcch
Q 014936 59 EAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALL-SRPGANILLPRPGFPIY 137 (415)
Q Consensus 59 ~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l-~~~gd~vi~~~p~y~~~ 137 (415)
+++.+.+..+.+ .......++++.++++++ .+++++++|+++++..++.++ .++||+|+++.++|..+
T Consensus 3 ~~~~~~~~~~~~---~~~~~~~~~~~~la~~~~--------~~~~~~~~sgt~al~~~l~~l~~~~gd~vl~~~~~~~~~ 71 (352)
T cd00616 3 EAVEEVLDSGWL---TLGPKVREFEKAFAEYLG--------VKYAVAVSSGTAALHLALRALGIGPGDEVIVPSFTFVAT 71 (352)
T ss_pred HHHHHHHHcCCc---cCCHHHHHHHHHHHHHhC--------CCeEEEECCHHHHHHHHHHHcCCCCCCEEEeCCcchHHH
Confidence 455566655433 222357899999999982 357888899999999999998 58999999999999999
Q ss_pred HHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCC
Q 014936 138 ELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGH 217 (415)
Q Consensus 138 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~ 217 (415)
...+...|+++..+++++ +++.+|++.+++.++++++++++++ ++|... ++++|.++|+++|+++|+|++|+.
T Consensus 72 ~~~~~~~g~~~~~~~~~~-~~~~~d~~~l~~~i~~~~~~v~~~~---~~G~~~---~~~~i~~l~~~~~i~li~D~a~~~ 144 (352)
T cd00616 72 ANAILLLGATPVFVDIDP-DTYNIDPELIEAAITPRTKAIIPVH---LYGNPA---DMDAIMAIAKRHGLPVIEDAAQAL 144 (352)
T ss_pred HHHHHHcCCeEEEEecCC-CcCCcCHHHHHHhcCcCCeEEEEEC---CCCCcC---CHHHHHHHHHHcCCeEEEECCCCC
Confidence 999999999999998854 3567899999999988889888765 688874 477788888999999999999986
Q ss_pred cccCCCCcccccccCCCCCeEEEccCc--cccCCCCceEEEEEeeCCCCCCChHHHHHHHHhhccc--------------
Q 014936 218 LVFGDKPFVPMGVFGSTVPILTLGSLS--KRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDI-------------- 281 (415)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~i~~~s~s--K~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~-------------- 281 (415)
+..... ..+..+. .+.+.|++ |.+ ++.+.|++++++ +++.+.++.....
T Consensus 145 g~~~~~--~~~~~~~----d~~~~S~~~~K~~--~~~~gg~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (352)
T cd00616 145 GATYKG--RKVGTFG----DAGAFSFHPTKNL--TTGEGGAVVTND-------EELAERARLLRNHGRDRDRFKYEHEIL 209 (352)
T ss_pred CCeECC--EEcccCc----ceeEEcCCCCCCC--cccCceEEEECC-------HHHHHHHHHHHHcCCCCCCCcccccee
Confidence 432111 1111111 15566766 886 344568888754 2455555433110
Q ss_pred --cCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCC----CceEEEEecCccccCCCCC
Q 014936 282 --LGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPE----GSMAVMLKLNLSLLDDIID 355 (415)
Q Consensus 282 --~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~----~g~~~~~~l~~~~~~~~~~ 355 (415)
+...+..........+ ..+++..++.+++.+++.+.|++++++..+..+. ....+.+.++.. ...+
T Consensus 210 ~~~~~~~~~~aa~~~~~l-----~~~~~~~~~~~~~~~~~~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~---~~~~ 281 (352)
T cd00616 210 GYNYRLSEIQAAIGLAQL-----EKLDEIIARRREIAERYKELLADLPGIRLPDVPPGVKHSYHLYVIRLDPE---AGES 281 (352)
T ss_pred eeccCcCHHHHHHHHHHH-----HhhHHHHHHHHHHHHHHHHHhcCCCCccCCCCCCCCceeeEEEEEEECCc---CCCC
Confidence 1112222222222222 3467777888899999999999988887442222 123344444420 0124
Q ss_pred HHHHHHHHHhhcCeEEEcCCCCC----------------C-------CCeEEEEee--CChhhHHHHHHHHH
Q 014936 356 DIDFCFKLAKEESVIILPGTAVG----------------L-------KNWLRVTFA--VDPYSLEECLDRIK 402 (415)
Q Consensus 356 ~~~~~~~ll~~~gi~v~~g~~~~----------------~-------~~~iRi~~~--~~~~~l~~~l~~l~ 402 (415)
..++...| +++||.+....... . .+.+|+++. .++++++.+++.|+
T Consensus 282 ~~~v~~~L-~~~gI~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~l~l~~~~~~t~~di~~i~~~l~ 352 (352)
T cd00616 282 RDELIEAL-KEAGIETRVHYPPLHHQPPYKKLLGYPPGDLPNAEDLAERVLSLPLHPSLTEEEIDRVIEALR 352 (352)
T ss_pred HHHHHHHH-HHCCCCeeeecCccccCHhhhhccCCCcCCChHHHHHHhCeEEccCCCCCCHHHHHHHHHHhC
Confidence 55666665 66799765322110 0 257999994 78999999988763
No 233
>COG2008 GLY1 Threonine aldolase [Amino acid transport and metabolism]
Probab=99.91 E-value=2.2e-22 Score=176.75 Aligned_cols=327 Identities=17% Similarity=0.162 Sum_probs=218.9
Q ss_pred eEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHH
Q 014936 38 ISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAM 117 (415)
Q Consensus 38 i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~ 117 (415)
++|.+.+ .-.++|++.+++.+.-.. ....|++.+-...+++.+++.+ ..+.++++++||+++.+++
T Consensus 2 ~~f~SDn-----~~g~~~~m~eam~~a~~~-~~~~YG~D~~~~~~e~~~ae~~--------g~~a~~Fv~sGT~aN~lal 67 (342)
T COG2008 2 IDFRSDN-----VAGPTPEMREALAAANAV-GDDVYGEDPTTNALEQRIAELF--------GKEAALFVPSGTQANQLAL 67 (342)
T ss_pred CccccCc-----cCCCCHHHHHHHHhcccc-CCCCCCCCHHHHHHHHHHHHHh--------CCceEEEecCccHHHHHHH
Confidence 4555555 145789999999887532 2347887766777777777776 2389999999999999999
Q ss_pred HHhcCCCCEEEEcCCCCcchHHH--HHhCCCeEEEeeccCCCCCCCChhHHHhhcCC------CceEEEecCCCCccccC
Q 014936 118 ALLSRPGANILLPRPGFPIYELS--AAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ------NTVALVIINPGNPCGNV 189 (415)
Q Consensus 118 ~~l~~~gd~vi~~~p~y~~~~~~--~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~------~~~~v~i~~p~nptG~~ 189 (415)
.+.++||..|++..-.|-...++ ...++ .+..++..+..+..+++++++..+.+ .+.++++.+++|..|++
T Consensus 68 ~~~~~~~~~vi~~~~aHi~~~E~Ga~~~~~-~~~~~~~~~g~~Gklt~e~v~~~i~~~d~~~~~~~~~~~e~~~te~GtV 146 (342)
T COG2008 68 AAHCQPGESVICHETAHIYTDECGAPEFFG-GGQKLPIVPGADGKLTPEDVEAAIRPDDIHHAPTPLAVLENTATEGGTV 146 (342)
T ss_pred HHhcCCCCeEEEeccccceecccCcHHHHc-CCceeccCCCCCCCcCHHHHHHhhcCCCcccCCCceEEEeeccCCCcee
Confidence 99999999999999988765543 22222 22233444545678999999997763 24556666666688999
Q ss_pred CCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChH
Q 014936 190 YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKP 269 (415)
Q Consensus 190 ~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~ 269 (415)
+|.+++++|+++|+++|+.+++|.+--+....... .+...+...-.++++ ++||..+.+ +|.++..+ .
T Consensus 147 y~l~el~~i~~~~k~~~l~LHmDGAR~~nA~valg-~~~~~~~~~~D~v~~-~~tK~g~~~---~gAiv~gn-------~ 214 (342)
T COG2008 147 YPLDELEAISAVCKEHGLPLHMDGARLANALVALG-VALKTIKSYVDSVSF-CLTKGGGAP---VGAIVFGN-------R 214 (342)
T ss_pred cCHHHHHHHHHHHHHhCCceeechHHHHHHHHHcC-CCHHHHHhhCCEEEE-ecccCCcce---eeeEEEcC-------H
Confidence 99999999999999999999999987654322212 222223222233444 689995444 58888765 3
Q ss_pred HHHHHHHhhccccCCc---hhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecC
Q 014936 270 KVVERMKKYFDILGDP---ATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLN 346 (415)
Q Consensus 270 ~~~~~~~~~~~~~~~~---~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~ 346 (415)
+++++++......++. ..+...+...+|++ +.......+-.+.+..+.+.|+..||++ +..|...+.++++++
T Consensus 215 ~~~~~a~~~rK~~Ggl~~k~r~laA~~~~~l~~---~~~~~~~~Han~mA~~La~~~~~~~G~~-~~~~~~tN~vf~~l~ 290 (342)
T COG2008 215 DFAKRARRWRKRAGGLMRKARFLAAQGLYALED---DVWRLAADHANAMAARLAEGLEAKPGVK-LAFPVETNMVFVRLP 290 (342)
T ss_pred HHHHHHHHHHHHhcccHhhhhHHHHHHHHHHhc---cHHHHHHHHHHHHHHHHHHhhhhcCCce-eccCCcccEEEEECC
Confidence 6777777664333332 22233333444544 4444555666667889999999888998 446678889999987
Q ss_pred ccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEee--CChhhHHHHHHHHHHHH
Q 014936 347 LSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFA--VDPYSLEECLDRIKSFY 405 (415)
Q Consensus 347 ~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~--~~~~~l~~~l~~l~~~~ 405 (415)
.... ........+...|+.+.+++ .-+|+.++ ++++++++++..++.++
T Consensus 291 ~~~i-----~~l~~~~~~~~~~~~~~~~~-----~~vRfvts~a~~~edv~~~~~~~~~~~ 341 (342)
T COG2008 291 ESAI-----EALRLAGALFYRGVLIGAHG-----EIVRFVTSWATSEEDVDELVAAIKALL 341 (342)
T ss_pred hHHH-----HHHHhhchhheeeeeccCCC-----ceEEEEeeccCCHHHHHHHHHHHHHhh
Confidence 4211 11111112233344443322 36899884 78999999999888764
No 234
>PRK08360 4-aminobutyrate aminotransferase; Provisional
Probab=99.91 E-value=2.7e-21 Score=184.10 Aligned_cols=350 Identities=16% Similarity=0.140 Sum_probs=213.9
Q ss_pred ccCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHH
Q 014936 32 KNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQ 111 (415)
Q Consensus 32 ~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~ 111 (415)
.+|+.++|+..|.-.... --.+|.+.+++.+++..... +.......+.+.++|+.+.+..+ ..-+.++++++|++
T Consensus 38 ~dG~~ylD~~~g~~~~~l-Gh~~p~v~~Ai~~ql~~~~~--~~~~~~~~~~~~~la~~L~~~~p--~~~~~v~f~~sGsE 112 (443)
T PRK08360 38 IEGNEYIDFLSDAAVQNV-GHNNPRVVKAIKEQTDKLIH--YTPIYGFPVEPLLLAEKLIEIAP--GDNPKVSFGLSGSD 112 (443)
T ss_pred CCCCEEEEccccHhhccc-CCCCHHHHHHHHHHHHhccC--ccccccCcHHHHHHHHHHHHhCC--CCCCEEEEcCCHHH
Confidence 358899999888422111 12479999999999875322 12111223445555555554322 12368999999999
Q ss_pred HHHHHHHHhc--CCCCEEEEcCCCCcchHHHHHh-CCC------------eEEEeeccCCC--CCC--------CChhHH
Q 014936 112 AIDVAMALLS--RPGANILLPRPGFPIYELSAAF-RHI------------EVRHFDLLPDK--GWE--------VDLDDI 166 (415)
Q Consensus 112 al~~~~~~l~--~~gd~vi~~~p~y~~~~~~~~~-~g~------------~~~~~~~~~~~--~~~--------~~~~~l 166 (415)
|++.+++... ..-..|+....+|++....+.. .|. .+..++..... .+. .+++.+
T Consensus 113 Ave~AlklAr~~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (443)
T PRK08360 113 ANDGAIKFARAYTKRRKILSYLRSYYGSTYGAMSLTGLDFPVRALVGELSDVHYIPYPDCYRCPFGKEPGSCKMECVEYI 192 (443)
T ss_pred HHHHHHHHHHHhcCCCeEEEEeCCcCCcCHHHHHhcCCCcccccCCCCCCCcEEEeCCccccccccCchhhhHHHHHHHH
Confidence 9999998764 1225788888888876543322 121 11222211000 000 123445
Q ss_pred HhhcCC----CceEEEecCC-CCccccCCC-HHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEE
Q 014936 167 ESLADQ----NTVALVIINP-GNPCGNVYS-YQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTL 240 (415)
Q Consensus 167 ~~~~~~----~~~~v~i~~p-~nptG~~~~-~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~ 240 (415)
++.++. ...+.++..| +||+|.+++ .+.+++|.++|++||+++|+||+|.++.+.|... ....++..++++
T Consensus 193 ~~~l~~~~~~~~iAAvi~eP~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~G~~~-a~~~~~~~pDii-- 269 (443)
T PRK08360 193 KEKFEGEVYAEGVAALFAEPIQGDAGMIVPPEDYFKKLKKILDEHGILLVVDEVQSGLGRTGKWF-AIEHFGVEPDII-- 269 (443)
T ss_pred HHHHHhccCCCCeEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCccch-hhhhcCCCCCEE--
Confidence 555531 2334455567 699999876 5579999999999999999999999877666432 222223333333
Q ss_pred ccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhh-ccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHH
Q 014936 241 GSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKY-FDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDIC 319 (415)
Q Consensus 241 ~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l 319 (415)
++||.++ +|+|+||+++++ ++++.+... ...+...+++.+.++.+.|+...++ +..++++++-+++
T Consensus 270 -tlsK~l~-~G~pigav~~~~--------~i~~~~~~~~~~~T~~~~p~~~aaa~a~l~~l~~~---~l~~~~~~~g~~l 336 (443)
T PRK08360 270 -TLGKPLG-GGLPISATIGRA--------EIMDSLPPLAHAFTLSGNPVASAAALAVIEEIEEK---NLLKRAEKLGNYT 336 (443)
T ss_pred -Eeccccc-CCceeEEEEEcH--------HHHhhhcCCCCCCCCCcCHHHHHHHHHHHHHHHHc---CHHHHHHHHHHHH
Confidence 6799976 899999999865 677777544 2335667888898888888653221 2344555555555
Q ss_pred HHHhhc----CCCCcCCCCCCCceEEEEecCcccc---CCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEe--eCC
Q 014936 320 YNKIKE----IPCISCPHKPEGSMAVMLKLNLSLL---DDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTF--AVD 390 (415)
Q Consensus 320 ~~~l~~----~~~~~~~~~p~~g~~~~~~l~~~~~---~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~--~~~ 390 (415)
.+.|++ .|.+. . ...-|.++-+.+..... .+......+... +.++||.+.+.. .+.+|+++ .++
T Consensus 337 ~~~L~~l~~~~~~v~-~-vrg~Gl~~gie~~~~~~~~~~~~~~~~~~~~~-l~~~Gi~~~~~~----~~~lr~~P~l~~t 409 (443)
T PRK08360 337 KKRLEEMKKKHELIG-D-VRGIGLMIGVDLVKDRETKERAYEEAAKVVWR-AWELGLIVTFFS----GNVLRIQPPLTIE 409 (443)
T ss_pred HHHHHHHHHhCCCee-e-eeccceEEEEEEecCCcccCccHHHHHHHHHH-HHHCCeEEeecC----CCEEEEeCCCCCC
Confidence 555543 43222 1 23456666666532110 000012244444 466799986532 37899977 579
Q ss_pred hhhHHHHHHHHHHHHHHHH
Q 014936 391 PYSLEECLDRIKSFYQRHA 409 (415)
Q Consensus 391 ~~~l~~~l~~l~~~~~~~~ 409 (415)
++++++++++|.++++...
T Consensus 410 ~~~id~~~~~l~~~l~~~~ 428 (443)
T PRK08360 410 KEVLDEGLDILEEAIEDVE 428 (443)
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 9999999999999998754
No 235
>PRK07671 cystathionine beta-lyase; Provisional
Probab=99.91 E-value=1.4e-21 Score=182.60 Aligned_cols=226 Identities=17% Similarity=0.152 Sum_probs=160.6
Q ss_pred CCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHH----HHHhCC
Q 014936 70 FNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYEL----SAAFRH 145 (415)
Q Consensus 70 ~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~----~~~~~g 145 (415)
+.+|+++ ...+|++.+|++.+ .+..+++++|+.++..++ .++++||+|+++.|+|++... .+...|
T Consensus 44 y~r~~~p-~~~~Le~~lA~l~g--------~~~~~~~~sG~aai~~~~-~~l~~Gd~Viv~~~~y~~~~~~~~~~~~~~G 113 (377)
T PRK07671 44 YSRTGNP-TRAALEELIAVLEG--------GHAGFAFGSGMAAITAVM-MLFSSGDHVILTDDVYGGTYRVMTKVLNRFG 113 (377)
T ss_pred cCCCCCh-HHHHHHHHHHHHhC--------CCceEEeCCHHHHHHHHH-HHhCCCCEEEECCCccchHHHHHHHHHhcCC
Confidence 3445543 46889999999872 233455666677887765 567899999999999985443 334578
Q ss_pred CeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCc
Q 014936 146 IEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPF 225 (415)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~ 225 (415)
+++..++. .|++++++++++++++|++++|+||+|.+ .++++|+++|+++|+++|+|++|+...+. .
T Consensus 114 ~~v~~v~~-------~d~~~l~~ai~~~tklV~le~P~NPtg~~---~dl~~I~~la~~~g~~lvvD~a~~~~~~~-~-- 180 (377)
T PRK07671 114 IEHTFVDT-------SNLEEVEEAIRPNTKAIYVETPTNPLLKI---TDIKKISTIAKEKGLLTIVDNTFMTPYWQ-S-- 180 (377)
T ss_pred eEEEEECC-------CCHHHHHHhcCCCCeEEEEECCCCCCCcc---cCHHHHHHHHHHcCCEEEEECCCCccccC-C--
Confidence 88888753 37899999999999999999999999998 56888888889999999999999753322 1
Q ss_pred ccccccCCCCCeEEEccCccccCCCC-ceEEEEEeeCCCCCCChHHHHHHHHhhccc-cCCchhHHHHHHHHhhCCCcHH
Q 014936 226 VPMGVFGSTVPILTLGSLSKRWIVPG-WRLGWFVTTDPCGMFRKPKVVERMKKYFDI-LGDPATFIQAAVPSILQQPDEV 303 (415)
Q Consensus 226 ~~~~~~~~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~a~~~~l~~~~~~ 303 (415)
++ .++. .+++.|+||.++.++ .-.|++++++ +++.+.++..... ....++.....+..-++
T Consensus 181 -p~-~~g~---Divv~S~sK~l~G~~~~~~G~~v~~~-------~~l~~~~~~~~~~~g~~~~~~~a~l~~~~l~----- 243 (377)
T PRK07671 181 -PI-SLGA---DIVLHSATKYLGGHSDVVAGLVVVNS-------PELAEDLHFVQNSTGGILGPQDSWLLLRGLK----- 243 (377)
T ss_pred -hh-hhCC---eEEEecCcccccCCccceeEEEEeCc-------HHHHHHHHHHHHhhcCCCCHHHHHHHHcCcC-----
Confidence 22 2222 388999999987554 3456666644 2466666655432 34455555554444443
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCC
Q 014936 304 FFKKTLNLLKQSVDICYNKIKEIPCISCPHKP 335 (415)
Q Consensus 304 ~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p 335 (415)
-+..+.++..++...+.+.|++.|++..+.+|
T Consensus 244 tl~~R~~~~~~na~~la~~L~~~~~v~~v~~p 275 (377)
T PRK07671 244 TLGIRMEEHETNSRAIAEFLNNHPAVNKVYYP 275 (377)
T ss_pred hHHHHHHHHHHHHHHHHHHHHcCCCeeEEECC
Confidence 36668888889999999999987766544444
No 236
>PRK11706 TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional
Probab=99.91 E-value=3.1e-21 Score=181.23 Aligned_cols=310 Identities=18% Similarity=0.252 Sum_probs=196.9
Q ss_pred HHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHh-cCCCCEEEEcCCC
Q 014936 55 HVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALL-SRPGANILLPRPG 133 (415)
Q Consensus 55 ~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l-~~~gd~vi~~~p~ 133 (415)
+.-.+++.+.+..+.. |+. .++++++++++++..| .+++++++|+++++.+++.++ .++||+|+++.|+
T Consensus 11 ~~~~~~~~~~l~~~~~--~g~----~~~~~~~e~~la~~~g----~~~~v~~~sgt~al~~~l~~~~~~~Gd~Viv~~~t 80 (375)
T PRK11706 11 GTELDYIQQAMSSGKL--CGD----GGFTRRCQQWLEQRFG----SAKVLLTPSCTAALEMAALLLDIQPGDEVIMPSYT 80 (375)
T ss_pred HHHHHHHHHHHHcCCc--cCC----CHHHHHHHHHHHHHhC----CCeEEEECCHHHHHHHHHHHhCCCCCCEEEECCCC
Confidence 4456777777775443 332 2445555555544333 469999999999999887766 6899999999999
Q ss_pred CcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEcc
Q 014936 134 FPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADE 213 (415)
Q Consensus 134 y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De 213 (415)
|..+...+...|++++.+++++ +++.+|++++++++++++++|++++ ++|.. .++.+|.++|+++|+++|+|+
T Consensus 81 ~~~~~~~~~~~G~~~v~~d~d~-~~~~~d~~~le~~i~~~tk~i~~~~---~~G~~---~~~~~i~~la~~~~i~vIeD~ 153 (375)
T PRK11706 81 FVSTANAFVLRGAKIVFVDIRP-DTMNIDETLIEAAITPKTRAIVPVH---YAGVA---CEMDTIMALAKKHNLFVVEDA 153 (375)
T ss_pred cHHHHHHHHHcCCEEEEEecCC-CcCCcCHHHHHHhcCCCCeEEEEeC---CCCCc---cCHHHHHHHHHHcCCEEEEEC
Confidence 9999999999999999999865 3467899999999988899888765 58877 457888899999999999999
Q ss_pred ccCCcc-cCCCCcccccccCCCCCeEEEccCc--cccCCCCceEEEEEeeCCCCCCChHHHHHHHHhhcccc--------
Q 014936 214 VYGHLV-FGDKPFVPMGVFGSTVPILTLGSLS--KRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDIL-------- 282 (415)
Q Consensus 214 ~~~~~~-~~~~~~~~~~~~~~~~~~i~~~s~s--K~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~-------- 282 (415)
+|+.+. +++.. +..+.. +.+.||+ |.++ +|.+.+++..++ ++.++++......
T Consensus 154 a~a~g~~~~~~~---~g~~~~----~~~~Sf~~~K~l~-~g~gG~~~~~~~--------~~~~~~~~~~~~g~~~~~~~~ 217 (375)
T PRK11706 154 AQGVMSTYKGRA---LGTIGH----IGCFSFHETKNYT-AGEGGALLINDP--------ALIERAEIIREKGTNRSQFFR 217 (375)
T ss_pred ccccccccCCee---eecCcC----EEEEeCCCCcccc-ccCCeEEEECCH--------HHHHHHHHHHHcCCCcchhhc
Confidence 999876 34332 222221 4444555 9864 466666665432 5666554443210
Q ss_pred ----------CCchhHHH-HHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCC---CCcCCCCCC----CceEEEEe
Q 014936 283 ----------GDPATFIQ-AAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIP---CISCPHKPE----GSMAVMLK 344 (415)
Q Consensus 283 ----------~~~~~~~~-~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~---~~~~~~~p~----~g~~~~~~ 344 (415)
.+.+.... ..++-.+.. -..+++..++.+++.+.+.+.|..++ .+.....|. ...++++.
T Consensus 218 ~~~~~~~~~~~g~~~~~~~~~aa~~~~q--l~~l~~~~~~R~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (375)
T PRK11706 218 GQVDKYTWVDIGSSYLPSELQAAYLWAQ--LEAADRINQRRLALWQRYYDALAPLAEAGRIELPSIPDDCKHNAHMFYIK 295 (375)
T ss_pred cCCCcceeeecccccCcCHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHhcCCCcCCeeecCCCCCCCceeeEEEEEE
Confidence 11221111 111111111 13466677777777778888887764 233111222 23355666
Q ss_pred cCccccCCCCCHHHHHHHHHhhcCeEEEcCCC----------CC-----C-------CCeEEEEe--eCChhhHHHHHHH
Q 014936 345 LNLSLLDDIIDDIDFCFKLAKEESVIILPGTA----------VG-----L-------KNWLRVTF--AVDPYSLEECLDR 400 (415)
Q Consensus 345 l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~----------~~-----~-------~~~iRi~~--~~~~~~l~~~l~~ 400 (415)
++.. .+..++...+ .++||.+..... ++ . ...+-+-+ ..++++++..++.
T Consensus 296 ~~~~-----~~r~~l~~~L-~~~gI~~~~~~~p~~~~~~~~~~~~~~~~~p~a~~~~~~~l~lP~~~~l~~~~~~~i~~~ 369 (375)
T PRK11706 296 LRDL-----EDRSALINFL-KEAGIMAVFHYIPLHSSPAGERFGRFHGEDRYTTKESERLLRLPLFYNLTDVEQRTVIDT 369 (375)
T ss_pred ECCc-----CCHHHHHHHH-HHCCCCccccCCccCcchhhHhcCCCCCCChHHHHHHhCcEeccCCCCCCHHHHHHHHHH
Confidence 6531 1344555554 677998653210 00 0 23344444 3578899999888
Q ss_pred HHHHH
Q 014936 401 IKSFY 405 (415)
Q Consensus 401 l~~~~ 405 (415)
|++++
T Consensus 370 i~~~~ 374 (375)
T PRK11706 370 ILEFF 374 (375)
T ss_pred HHHHh
Confidence 88754
No 237
>PLN02509 cystathionine beta-lyase
Probab=99.91 E-value=2.5e-21 Score=183.43 Aligned_cols=228 Identities=16% Similarity=0.166 Sum_probs=162.5
Q ss_pred CCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHH----HHHhCCC
Q 014936 71 NGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYEL----SAAFRHI 146 (415)
Q Consensus 71 ~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~----~~~~~g~ 146 (415)
..|... |.+ .++.+++++++..+ .++.++++|+++++.+++ .++++||+|+++.+.|+++.. .+...|+
T Consensus 125 ~~Y~r~-gnp-t~~aLE~~lA~leg----~e~ai~~~SG~aAi~~il-~ll~~GD~VI~~~~~y~~t~~ll~~~l~~~G~ 197 (464)
T PLN02509 125 YDYTRS-GNP-TRDALESLLAKLDK----ADRAFCFTSGMAALSAVT-HLIKNGEEIVAGDDVYGGSDRLLSQVVPRSGV 197 (464)
T ss_pred CccCCC-CCH-HHHHHHHHHHHHhC----CCEEEEeCcHHHHHHHHH-HHhCCCCEEEEcCCchhhHHHHHHHHHHHCCe
Confidence 356653 543 56666666655433 566778888889987666 567999999999999998763 3456788
Q ss_pred eEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcc
Q 014936 147 EVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFV 226 (415)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~ 226 (415)
++..++. .|++++++++++++++|++++|+||+|.+ .++++|+++|+++|+++|+|++|+..... .
T Consensus 198 ~v~~vd~-------~d~e~l~~ai~~~TklV~lesPsNPtG~i---~Dl~~I~~lAk~~g~~lIVD~A~a~~~~~----~ 263 (464)
T PLN02509 198 VVKRVNT-------TNLDEVAAAIGPQTKLVWLESPTNPRQQI---SDIRKIAEMAHAQGALVLVDNSIMSPVLS----R 263 (464)
T ss_pred EEEEeCC-------CCHHHHHHhCCcCCeEEEEECCCCCCCCH---HHHHHHHHHHHHcCCEEEEECCccccccC----C
Confidence 8887753 37899999999899999999999999997 88999999999999999999998754321 1
Q ss_pred cccccCCCCCeEEEccCccccCCCC-ceEEEEEeeCCCCCCChHHHHHHHHhhccc-cCCchhHHHHHHHHhhCCCcHHH
Q 014936 227 PMGVFGSTVPILTLGSLSKRWIVPG-WRLGWFVTTDPCGMFRKPKVVERMKKYFDI-LGDPATFIQAAVPSILQQPDEVF 304 (415)
Q Consensus 227 ~~~~~~~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~a~~~~l~~~~~~~ 304 (415)
++ .++. .++++|++|.++.+| .-.|.++++++ .+.+.++..... ....++.....+...|+ .
T Consensus 264 pl-~~ga---Divv~S~tK~l~G~gdv~gG~v~~~~~-------~l~~~~~~~~~~~g~~l~p~~A~l~lr~L~-----t 327 (464)
T PLN02509 264 PL-ELGA---DIVMHSATKFIAGHSDVMAGVLAVKGE-------KLAKEVYFLQNSEGSGLAPFDCWLCLRGIK-----T 327 (464)
T ss_pred hh-hcCC---cEEEecCcccccCCCccceeEEEeccH-------HHHHHHHHHHHhcCCCcCHHHHHHHHhhhh-----h
Confidence 22 1222 288899999976644 33566665431 344444333221 23345555555555554 4
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCCCcCCCCC
Q 014936 305 FKKTLNLLKQSVDICYNKIKEIPCISCPHKP 335 (415)
Q Consensus 305 ~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p 335 (415)
+..+.++.++++..+.+.|++.|.+..+.+|
T Consensus 328 L~~R~~r~~~nA~~la~~L~~~p~V~~V~yP 358 (464)
T PLN02509 328 MALRIEKQQENARKIAMYLSSHPRVKKVYYA 358 (464)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCccEEECC
Confidence 7888899999999999999988877545555
No 238
>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional
Probab=99.91 E-value=2.1e-21 Score=182.38 Aligned_cols=310 Identities=14% Similarity=0.131 Sum_probs=203.6
Q ss_pred HHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHh-cCCCCEEEEcCCC
Q 014936 55 HVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALL-SRPGANILLPRPG 133 (415)
Q Consensus 55 ~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l-~~~gd~vi~~~p~ 133 (415)
+.-++++.+.+..+.+ .+++ ...+|++.+|++++ .+++++++|+++|+.+++.++ +++||+|+++.++
T Consensus 14 ~~e~~~~~~~l~~~~~-~~g~--~~~~le~~la~~~g--------~~~~v~~~sgt~al~lal~al~~~~Gd~Viv~~~~ 82 (379)
T PRK11658 14 DEELAAVKEVLRSGWI-TTGP--KNQALEQAFCQLTG--------NQHAIAVSSATAGMHITLMALGIGPGDEVITPSLT 82 (379)
T ss_pred HHHHHHHHHHHHcCCc-cCCH--hHHHHHHHHHHHhC--------CCeEEEECCHHHHHHHHHHHcCCCCCCEEEECCCc
Confidence 5567788888776543 3333 46899999999983 346888999999999999999 7999999999999
Q ss_pred CcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEcc
Q 014936 134 FPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADE 213 (415)
Q Consensus 134 y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De 213 (415)
|..+...+...|++++.+++++ +++.+|++.+++++++++++|+ |+|++|.. .++++|+++|+++|+++|+|+
T Consensus 83 ~~~~~~~~~~~G~~~v~vd~~~-~~~~~d~~~l~~~i~~~tkav~---~~~~~G~~---~d~~~i~~~a~~~gi~vi~D~ 155 (379)
T PRK11658 83 WVSTLNMIVLLGATPVMVDVDR-DTLMVTPEAIEAAITPRTKAII---PVHYAGAP---ADLDAIRAIGERYGIPVIEDA 155 (379)
T ss_pred HHHHHHHHHHcCCEEEEEecCC-CcCCcCHHHHHHhcccCCeEEE---EeCCCCCc---CCHHHHHHHHHHcCCeEEEEC
Confidence 9999999999999999999865 4467899999999988898877 55568987 457788899999999999999
Q ss_pred ccCCcc-cCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhhccccCC--------
Q 014936 214 VYGHLV-FGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILGD-------- 284 (415)
Q Consensus 214 ~~~~~~-~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------- 284 (415)
+|+... +.+.. +...+ +.+.||++...+++.+.|++++++ +++.++++........
T Consensus 156 a~a~g~~~~~~~---~g~~g-----~~~~Sf~~~K~l~~g~GG~v~~~~-------~~~~~~~~~~~~~G~~~~~~~~~~ 220 (379)
T PRK11658 156 AHAVGTYYKGRH---IGARG-----TAIFSFHAIKNITCAEGGLVVTDD-------DELADRLRSLKFHGLGVDAFDRQT 220 (379)
T ss_pred CCccCCeECCee---cCCCC-----CEEEeCCCCCcCcccCceEEEECC-------HHHHHHHHHHHHcCCCcchhhhhc
Confidence 998643 33321 22222 134566654445667788888754 2466655543211100
Q ss_pred -------------ch-hH--HHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCC----ceE-EEE
Q 014936 285 -------------PA-TF--IQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEG----SMA-VML 343 (415)
Q Consensus 285 -------------~~-~~--~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~----g~~-~~~ 343 (415)
.+ .+ .++|+. ... .+.+++..++.+++.+.+.+.|+.++... +..|.. .++ +.+
T Consensus 221 ~~~~~~~~~~~~G~n~~~~~l~AAl~-~~q---l~~l~~~~~~r~~~a~~~~~~L~~~~~~~-~~~~~~~~~~~~~~~~~ 295 (379)
T PRK11658 221 QGRAPQAEVLTPGYKYNLADINAAIA-LVQ---LAKLEALNARRREIAARYLQALADLPFQP-LSLPAWPHQHAWHLFII 295 (379)
T ss_pred ccCCCcceeeccccccCcCHHHHHHH-HHH---HHHHHHHHHHHHHHHHHHHHHhcCCCCcc-CcCCCCCCceeEEEEEE
Confidence 00 01 122222 111 24577788888888888889998875433 212221 222 223
Q ss_pred ecCccccCCCCCHHHHHHHHHhhcCeEEEcCCC-------CC-------C-------CCeEEEEe--eCChhhHHHHHHH
Q 014936 344 KLNLSLLDDIIDDIDFCFKLAKEESVIILPGTA-------VG-------L-------KNWLRVTF--AVDPYSLEECLDR 400 (415)
Q Consensus 344 ~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~-------~~-------~-------~~~iRi~~--~~~~~~l~~~l~~ 400 (415)
.++.... + .+..++...| +++||.+.+... |. . ...+-+-+ ..++++++..++.
T Consensus 296 ~~~~~~~-~-~~r~~~~~~L-~~~gI~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~lP~~~~l~~~~~~~i~~~ 372 (379)
T PRK11658 296 RVDEERC-G-ISRDALMEAL-KERGIGTGLHFRAAHTQKYYRERFPTLSLPNTEWNSERICSLPLFPDMTDADVDRVITA 372 (379)
T ss_pred EECCccc-c-CCHHHHHHHH-HHCCCCCcccCcCcccChhhhccCCCCCChHHHHHHhCeEEccCCCCCCHHHHHHHHHH
Confidence 3432100 1 1345565655 677987652210 00 0 23344444 3678999999998
Q ss_pred HHHHH
Q 014936 401 IKSFY 405 (415)
Q Consensus 401 l~~~~ 405 (415)
|++++
T Consensus 373 i~~~~ 377 (379)
T PRK11658 373 LQQIA 377 (379)
T ss_pred HHHHH
Confidence 88764
No 239
>PRK05967 cystathionine beta-lyase; Provisional
Probab=99.91 E-value=4.8e-21 Score=178.01 Aligned_cols=204 Identities=16% Similarity=0.141 Sum_probs=153.4
Q ss_pred cEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHH----HHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEE
Q 014936 102 DVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYEL----SAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVAL 177 (415)
Q Consensus 102 ~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~----~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v 177 (415)
..+++++|++|+..++.+++++||+|+++.|.|+++.. .++..|+++..++.. +.+.+++++++++++|
T Consensus 81 ~~v~~sSG~aAi~~~l~all~~GD~Vlv~~~~Y~~~~~l~~~~l~~~Gi~v~~vd~~-------~~e~l~~al~~~TklV 153 (395)
T PRK05967 81 GTILVPSGLAAVTVPFLGFLSPGDHALIVDSVYYPTRHFCDTMLKRLGVEVEYYDPE-------IGAGIAKLMRPNTKVV 153 (395)
T ss_pred CEEEECcHHHHHHHHHHHhcCCCCEEEEccCCcHHHHHHHHHHHHhcCeEEEEeCCC-------CHHHHHHhcCcCceEE
Confidence 44566668999999999999999999999999998765 457789988887431 3577999999999999
Q ss_pred EecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCC-CCceEEE
Q 014936 178 VIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIV-PGWRLGW 256 (415)
Q Consensus 178 ~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~-~G~r~G~ 256 (415)
++.+|+||++.+ .++++|+++|+++|+++++|++|+...+ ..++ .++.+ +++.|++|.++. ++.-.|+
T Consensus 154 ~lesPsNP~l~v---~dl~~I~~la~~~g~~vvVD~t~a~p~~----~~pl-~~GaD---ivv~S~tKy~~Gh~d~~~G~ 222 (395)
T PRK05967 154 HTEAPGSNTFEM---QDIPAIAEAAHRHGAIVMMDNTWATPLY----FRPL-DFGVD---ISIHAATKYPSGHSDILLGT 222 (395)
T ss_pred EEECCCCCCCcH---HHHHHHHHHHHHhCCEEEEECCccCcee----cChh-HcCCC---EEEEecccccCCCCCeeEEE
Confidence 999999998766 8999999999999999999999976331 1122 23444 889999998654 4466776
Q ss_pred EEeeCCCCCCChHHHHHHHHhh-ccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCC
Q 014936 257 FVTTDPCGMFRKPKVVERMKKY-FDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKP 335 (415)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p 335 (415)
++.++ ++++.+... .......++.....+..-|+. +.-+.++..+++..+.+.|++.|.+..+.+|
T Consensus 223 v~~~~--------~~~~~l~~~~~~~G~~~~p~da~l~~rgl~T-----l~lR~~~~~~na~~lA~~L~~hp~v~~V~yP 289 (395)
T PRK05967 223 VSANE--------KCWPQLLEAHGTLGLCAGPDDTYQILRGLRT-----MGIRLEHHRKSALEIARWLEGRPDVARVLHP 289 (395)
T ss_pred EEcCH--------HHHHHHHHHHHHcCCCCCHHHHHHHHcCccc-----HHHHHHHHHHHHHHHHHHHHhCCCCcEEECC
Confidence 65432 345555433 233456677776666666654 7778888889999999999988777545555
Q ss_pred C
Q 014936 336 E 336 (415)
Q Consensus 336 ~ 336 (415)
.
T Consensus 290 g 290 (395)
T PRK05967 290 A 290 (395)
T ss_pred C
Confidence 3
No 240
>PRK13034 serine hydroxymethyltransferase; Reviewed
Probab=99.91 E-value=3.7e-21 Score=182.43 Aligned_cols=332 Identities=13% Similarity=0.071 Sum_probs=207.7
Q ss_pred cceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCC------CCCCCcHHHHH----HHHHHHhhhCCCCCCCCcE-
Q 014936 35 KKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGY------APTAGLPLTRR----AIAEYLSRDLPYKLTPNDV- 103 (415)
Q Consensus 35 ~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y------~~~~g~~~lr~----~ia~~~~~~~~~~~~~~~i- 103 (415)
++.+++-..+ ...+|.+++++...+......++ +..+...+|++ .++++++ .+..
T Consensus 28 ~~~~~l~~se------n~~~p~v~~a~~~~~~~~~~~g~~gsr~~~G~~~~~~lE~~~~~~la~l~g--------~~~al 93 (416)
T PRK13034 28 QDHLELIASE------NFTSPAVMEAQGSVLTNKYAEGYPGKRYYGGCEFVDEVEALAIERAKQLFG--------CDYAN 93 (416)
T ss_pred hcCeeecccc------cCCCHHHHHHhcchhhcCCCCCCCCCcccCCChHHHHHHHHHHHHHHHHhC--------CCceE
Confidence 5667776665 34589999999888522111111 11234677777 7777772 3345
Q ss_pred EEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcc-hHHHHHh--CCCeE--EEeeccCCCCCCCChhHHHhhcCC-CceEE
Q 014936 104 FVTSGCTQAIDVAMALLSRPGANILLPRPGFPI-YELSAAF--RHIEV--RHFDLLPDKGWEVDLDDIESLADQ-NTVAL 177 (415)
Q Consensus 104 ~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~-~~~~~~~--~g~~~--~~~~~~~~~~~~~~~~~l~~~~~~-~~~~v 177 (415)
+.+++|+.|+..++.+++++||+|+++..+|.+ +...++. .+... ..+++++. .+.+|++++++.++. ++++|
T Consensus 94 v~~~SG~~A~~~~l~al~~~GD~Vl~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~d~~~le~~l~~~~~klV 172 (416)
T PRK13034 94 VQPHSGSQANGAVYLALLKPGDTILGMSLSHGGHLTHGAKVSLSGKWYNAVQYGVDRL-TGLIDYDEVEELAKEHKPKLI 172 (416)
T ss_pred EecCCcHHHHHHHHHHhcCCCCEEEEcCccceeeeecCCcceeccceeeeEEcccccc-cCCcCHHHHHHHHhhcCCeEE
Confidence 556889999999999999999999999999987 3322221 12222 23444332 345899999988743 57777
Q ss_pred EecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEE
Q 014936 178 VIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWF 257 (415)
Q Consensus 178 ~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~ 257 (415)
++.++. +|.. .++.+|.++|+++|+++++|++|+.+.+.... ....+. .-.++++|++|+++.+. .|++
T Consensus 173 i~~~~~--~g~~---~dl~~l~~la~~~g~~livD~Aha~G~~~~g~--~~~~~~--~~Di~~~s~~K~l~g~~--GG~v 241 (416)
T PRK13034 173 IAGFSA--YPRE---LDFARFREIADEVGALLMVDMAHIAGLVAAGE--HPNPFP--HAHVVTTTTHKTLRGPR--GGMI 241 (416)
T ss_pred EECCCc--cccc---cCHHHHHHHHHHcCCEEEEeCcccccCcccCC--CCCCCC--CceEEEEeCcccCCCCC--CeEE
Confidence 766654 3555 46778888899999999999999887654211 111111 12388899999974332 3777
Q ss_pred EeeCCCCCCChHHHHHHHHhhcccc--CCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCC
Q 014936 258 VTTDPCGMFRKPKVVERMKKYFDIL--GDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKP 335 (415)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p 335 (415)
++++ +.+...++.....+ ....+....++...+....+....+.++++.++.+++.+.|+++ |+.+. .+
T Consensus 242 ~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~aa~~~al~~~~~~~~~~~~~~l~~~a~~l~~~L~~~-G~~~~-~~ 312 (416)
T PRK13034 242 LTND-------EEIAKKINSAVFPGLQGGPLMHVIAAKAVAFGEALQPEFKTYAKQVIANAQALAEVLKER-GYDLV-SG 312 (416)
T ss_pred EECc-------HHHHHHHHhhcCCcccCCccHHHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHc-CCEec-cC
Confidence 7654 23444454433221 22333333333323322111223456789999999999999988 77733 32
Q ss_pred -CCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCC------CCCCCCeEEEEee------CChhhHHHHHHHHH
Q 014936 336 -EGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGT------AVGLKNWLRVTFA------VDPYSLEECLDRIK 402 (415)
Q Consensus 336 -~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~------~~~~~~~iRi~~~------~~~~~l~~~l~~l~ 402 (415)
..+..+++.+.... .....+...|++.||.+.+-. ....+..+|+++. .++++++.+++.|.
T Consensus 313 ~~~t~i~~v~~~~~~-----~~~~~~~~~L~~~GI~v~~~~~p~~~~~p~~~~~lR~~~~~~t~~~~~~~di~~l~~~l~ 387 (416)
T PRK13034 313 GTDNHLLLVDLRPKG-----LSGKDAEQALERAGITVNKNTVPGDTESPFVTSGIRIGTPAGTTRGFGEAEFREIANWIL 387 (416)
T ss_pred CCCCcEEEEEcCCCC-----CCHHHHHHHHHhCCcEEeccCCCCCCcCCCCCCeeEeCcHHHHhCCCCHHHHHHHHHHHH
Confidence 34566666665321 133444455577899997521 1223568999972 46899999999999
Q ss_pred HHHH
Q 014936 403 SFYQ 406 (415)
Q Consensus 403 ~~~~ 406 (415)
+++.
T Consensus 388 ~~~~ 391 (416)
T PRK13034 388 DVLD 391 (416)
T ss_pred HHHh
Confidence 7776
No 241
>TIGR01814 kynureninase kynureninase. This model describes kynureninase, a pyridoxal-phosphate enzyme. Kynurinine is a Trp breakdown product and a precursor for NAD. In Chlamydia psittaci, an obligate intracellular pathogen, kynureninase makes anthranilate, a Trp precursor, from kynurenine. This counters the tryptophan hydrolysis that occurs in the host cell in response to the pathogen.
Probab=99.90 E-value=3.2e-21 Score=183.42 Aligned_cols=331 Identities=15% Similarity=0.106 Sum_probs=208.7
Q ss_pred cceeEecccCCCCCCCCCCcHHHHHHHHHHHhcC----CCCCCCCCCC---cHHHHHHHHHHHhhhCCCCCCCCcEEEeC
Q 014936 35 KKVISLAMGDPTVHSCFHTTHVATEAVAEALLSE----KFNGYAPTAG---LPLTRRAIAEYLSRDLPYKLTPNDVFVTS 107 (415)
Q Consensus 35 ~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~----~~~~y~~~~g---~~~lr~~ia~~~~~~~~~~~~~~~i~i~~ 107 (415)
+.++.|+.+... +.++.+.+++.+.+... ....+....+ ..+.++.+ +++ ++++++|++++
T Consensus 26 ~~~iyld~~a~g-----~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~------g~~~~~v~~~~ 93 (406)
T TIGR01814 26 NAVIYLDGNSLG-----LMPKAARNALKEELDKWAKIAIRGHNTGKAPWFTLDESLLKL-RLV------GAKEDEVVVMN 93 (406)
T ss_pred CCcEEecCCCcC-----cCcHHHHHHHHHHHHHHHHhhhccCccCCCChhhhhhhhccc-ccc------CCCCCcEEEeC
Confidence 567899877622 34788888887765421 1011110011 12222333 443 46789999999
Q ss_pred ChHHHHHHHHHHhcCCC---CEEEEcCCCCcchHH----HHHhCCCeE----EEeeccCCCCCCCChhHHHhhc---CCC
Q 014936 108 GCTQAIDVAMALLSRPG---ANILLPRPGFPIYEL----SAAFRHIEV----RHFDLLPDKGWEVDLDDIESLA---DQN 173 (415)
Q Consensus 108 g~~~al~~~~~~l~~~g---d~vi~~~p~y~~~~~----~~~~~g~~~----~~~~~~~~~~~~~~~~~l~~~~---~~~ 173 (415)
|+|++++.++.++.++| +.|++....|++... .++..|+++ ..++. +.++.++++.+++.+ .++
T Consensus 94 ~~t~~l~~~~~~~~~~~~~~~~i~~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~--~~~g~~~~~~l~~~~~~~~~~ 171 (406)
T TIGR01814 94 TLTINLHLLLASFYKPTPKRYKILLEAKAFPSDHYAIESQLQLHGLTVEESMVQIEP--REEETLRLEDILDTIEKNGDD 171 (406)
T ss_pred CchHHHHHHHHHhcCCcCCccEEEecCCCCChHHHHHHHHHHhcCCCcccceEEecc--CCCCccCHHHHHHHHHhcCCC
Confidence 99999999999876554 368888899987332 345678876 34433 334457888888776 467
Q ss_pred ceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccC-CCCc
Q 014936 174 TVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWI-VPGW 252 (415)
Q Consensus 174 ~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~-~~G~ 252 (415)
+++|++++++|.||.+.| +++|+++|+++|+++++|++++.. ..+..+...+.+ +++.|.+|++. .+|
T Consensus 172 t~lv~~~~v~~~tG~~~~---~~~i~~~~~~~g~~~~vD~aq~~G----~~~id~~~~gvD---~~~~s~hK~l~g~pG- 240 (406)
T TIGR01814 172 IAVILLSGVQYYTGQLFD---MAAITRAAHAKGALVGFDLAHAVG----NVPLDLHDWGVD---FACWCTYKYLNAGPG- 240 (406)
T ss_pred eEEEEEeccccccceecC---HHHHHHHHHHcCCEEEEEcccccC----CcccccccCCCC---EEEEcCccccCCCCC-
Confidence 899999999999999965 788888899999999999999983 333334444443 88889999863 445
Q ss_pred eEEEEEeeCCCCCCChHHHHHH--------H--------HhhccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHH
Q 014936 253 RLGWFVTTDPCGMFRKPKVVER--------M--------KKYFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSV 316 (415)
Q Consensus 253 r~G~~~~~~~~~~~~~~~~~~~--------~--------~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~ 316 (415)
|.++..++......|.+... + .......++++.....++.++|+...+..+++..++.+++.
T Consensus 241 --~~l~v~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~ 318 (406)
T TIGR01814 241 --AGAFVHEKHAHTERPRLAGWWGHARPTRFKMDNTLGLIPCGFRISNPPILSVAALRGSLDIFDQAGMEALRKKSLLLT 318 (406)
T ss_pred --eEEEEehhhhhhcCCCCCcccCCCCccccccccccCCCccceeeCCccHHHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Confidence 33333221100000000000 0 00001124556666666666665433344677888888888
Q ss_pred HHHHHHhhcC----CCCcCCCCCC----CceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEe-
Q 014936 317 DICYNKIKEI----PCISCPHKPE----GSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTF- 387 (415)
Q Consensus 317 ~~l~~~l~~~----~~~~~~~~p~----~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~- 387 (415)
+++.+.|+++ +++.++ .|. .+..+.+.++. +..++...| .++||.+... ..+.||+|+
T Consensus 319 ~~l~~~l~~~~~~~~~~~i~-~~~~~~~r~~~v~~~~~~-------~~~~~~~~L-~~~gi~v~~~----~~~~iRiS~~ 385 (406)
T TIGR01814 319 DYLEELIKARCGGPPVLTII-TPRDHAQRGCQLSLTHPV-------PGKAVFQAL-IKRGVIGDKR----EPSVIRVAPV 385 (406)
T ss_pred HHHHHHHHhhcCCCCceEEe-CCCChhhcCCeEEEEecC-------CHHHHHHHH-HHCCEEEecc----CCCeEEEech
Confidence 9999888764 346533 332 13344555541 345666665 5679987532 246899998
Q ss_pred e--CChhhHHHHHHHHHHHH
Q 014936 388 A--VDPYSLEECLDRIKSFY 405 (415)
Q Consensus 388 ~--~~~~~l~~~l~~l~~~~ 405 (415)
. ++++|++.+++.|++++
T Consensus 386 ~~~nt~~did~l~~~l~~~~ 405 (406)
T TIGR01814 386 PLYNTFVDVYDAVNVLEEIL 405 (406)
T ss_pred hccCCHHHHHHHHHHHHHHh
Confidence 3 48899999999998764
No 242
>PRK08134 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.90 E-value=7.6e-21 Score=179.92 Aligned_cols=227 Identities=14% Similarity=0.091 Sum_probs=164.0
Q ss_pred CCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHH----HhCCCeEEEee
Q 014936 77 AGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSA----AFRHIEVRHFD 152 (415)
Q Consensus 77 ~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~----~~~g~~~~~~~ 152 (415)
+...++++.+|++.+ .+..++++++++|+.+++.++.++||+|+++...|.+....+ ...|+++..++
T Consensus 64 p~~~~le~~lA~l~g--------~~~av~~sSGt~Al~~al~~ll~~Gd~Vi~~~~~y~~t~~~~~~~l~~~Gi~v~~vd 135 (433)
T PRK08134 64 PTVAVLEERVAALEG--------GVGAIATASGQAALHLAIATLMGAGSHIVASSALYGGSHNLLHYTLRRFGIETTFVK 135 (433)
T ss_pred hHHHHHHHHHHHHhC--------CCcEEEeCCHHHHHHHHHHHHhCCCCEEEEeCCccHHHHHHHHHHHhhCCeEEEEEC
Confidence 346889999999872 345789999999999999999999999999999998754443 45799998887
Q ss_pred ccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccC
Q 014936 153 LLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFG 232 (415)
Q Consensus 153 ~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~ 232 (415)
.+ |+++++++++++|++|++.+|+||+|.+. ++++|+++|+++|+++|+|.+++.... ..++ .++
T Consensus 136 ~~-------d~~~l~~~i~~~TklV~~e~~~np~g~v~---Di~~I~~la~~~gi~livD~t~a~~~~----~~pl-~~G 200 (433)
T PRK08134 136 PG-------DIDGWRAAIRPNTRLLFGETLGNPGLEVL---DIPTVAAIAHEAGVPLLVDSTFTTPYL----LRPF-EHG 200 (433)
T ss_pred CC-------CHHHHHHhcCCCCeEEEEECCCcccCccc---CHHHHHHHHHHcCCEEEEECCCccccc----CCch-hcC
Confidence 52 78999999999999999999999999995 478888889999999999999875332 2222 334
Q ss_pred CCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChH-------------------------HHHHHHH--hhccccCCc
Q 014936 233 STVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKP-------------------------KVVERMK--KYFDILGDP 285 (415)
Q Consensus 233 ~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~-------------------------~~~~~~~--~~~~~~~~~ 285 (415)
.+ +++.|.+|.++.+|..+|++++......+.+. .+....+ .........
T Consensus 201 aD---~vv~S~tK~l~g~g~~~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~~l 277 (433)
T PRK08134 201 AD---LVYHSATKFLGGHGTAIGGVLVDGGRFDWEASGKFPELTEPYAGFHGMVFAEESTVAAFLLRARREGLRDFGACL 277 (433)
T ss_pred CC---EEEeccccccCCCCCceEEEEEecCccccccccccccccCCcccccccchhhccchhHHHHHHHHHHHHhcCCCC
Confidence 43 88889999988888888887763211110000 0001111 112223345
Q ss_pred hhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCC
Q 014936 286 ATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHK 334 (415)
Q Consensus 286 ~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~ 334 (415)
++.....+..-|+. +..+.++..++...+.+.|+..|.+..+.+
T Consensus 278 s~~~A~l~~~gL~t-----l~~R~~~~~~nA~~la~~L~~~p~V~~V~y 321 (433)
T PRK08134 278 SPMNAWQLLQGIET-----LPLRMERHVANTRKVVAFLASHPAVARVAH 321 (433)
T ss_pred CHHHHHHHhcCCCc-----HHHHHHHHHHHHHHHHHHHHhCCCccEEEC
Confidence 55555555555554 778888888899999999988776543333
No 243
>PRK06176 cystathionine gamma-synthase/cystathionine beta-lyase; Validated
Probab=99.90 E-value=6.4e-21 Score=178.29 Aligned_cols=221 Identities=15% Similarity=0.136 Sum_probs=153.7
Q ss_pred CCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHH----HHHhCC
Q 014936 70 FNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYEL----SAAFRH 145 (415)
Q Consensus 70 ~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~----~~~~~g 145 (415)
+.+|+++ ....|++.+|++.+ .+..+++++|+.++.+++ .++++||+|++++|.|++... .+...|
T Consensus 44 y~r~~~p-~~~~Le~~la~l~g--------~~~al~~~SG~~Al~~~l-~~l~pGd~Vi~~~~~y~~t~~~~~~~~~~~g 113 (380)
T PRK06176 44 YSRSGNP-TRFALEELIADLEG--------GVKGFAFASGLAGIHAVF-SLFQSGDHVLLGDDVYGGTFRLFDKVLVKNG 113 (380)
T ss_pred ccCCCCh-hHHHHHHHHHHHhC--------CCCEEEECCHHHHHHHHH-HHcCCCCEEEEcCCChhHHHHHHHHHHHhcC
Confidence 3455553 46889999999872 334566677778998766 466899999999999986543 445678
Q ss_pred CeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCc
Q 014936 146 IEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPF 225 (415)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~ 225 (415)
+++..++. .|++++++++++++++|++.+|+||+|.+.+ +++|+++|+++|+++|+|++|+...+. .
T Consensus 114 i~v~~vd~-------~d~e~l~~ai~~~t~lV~lesP~Nptg~~~d---i~~I~~la~~~gi~vivD~t~a~~~~~-~-- 180 (380)
T PRK06176 114 LSCTIIDT-------SDLSQIKKAIKPNTKALYLETPSNPLLKITD---LAQCASVAKDHGLLTIVDNTFATPYYQ-N-- 180 (380)
T ss_pred eEEEEcCC-------CCHHHHHHhcCcCceEEEEECCCCCCceecC---HHHHHHHHHHcCCEEEEECCccccccC-C--
Confidence 88777653 3799999999989999999999999999954 778888899999999999999864322 1
Q ss_pred ccccccCCCCCeEEEccCccccCCCCc-eEEEEEeeCCCCCCChHHHHHHHHhhccc-cCCchhHHHHHHHHhhCCCcHH
Q 014936 226 VPMGVFGSTVPILTLGSLSKRWIVPGW-RLGWFVTTDPCGMFRKPKVVERMKKYFDI-LGDPATFIQAAVPSILQQPDEV 303 (415)
Q Consensus 226 ~~~~~~~~~~~~i~~~s~sK~~~~~G~-r~G~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~a~~~~l~~~~~~ 303 (415)
++ .++.+ +++.|++|.++.+|- -.|++++++ +++.++++..... ....++.....+...++.
T Consensus 181 -p~-~~gaD---ivv~S~tK~l~g~~d~~gG~vv~~~-------~~~~~~~~~~~~~~G~~~~~~~~~l~~~gl~t---- 244 (380)
T PRK06176 181 -PL-LLGAD---IVVHSGTKYLGGHSDVVAGLVTTNN-------EALAQEIAFFQNAIGGVLGPQDSWLLQRGIKT---- 244 (380)
T ss_pred -cc-ccCCC---EEEecCceeccCCccceeeEEEecH-------HHHHHHHHHHHHHhcCCCCHHHHHHHHhccCc----
Confidence 22 22333 888999999877664 345555533 2465666554332 223344444444434432
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCCc
Q 014936 304 FFKKTLNLLKQSVDICYNKIKEIPCIS 330 (415)
Q Consensus 304 ~~~~~~~~~~~~~~~l~~~l~~~~~~~ 330 (415)
+..+.++..++...+.+.|++.|.+.
T Consensus 245 -l~~R~~~~~~~a~~la~~L~~~p~v~ 270 (380)
T PRK06176 245 -LGLRMEAHQKNALCVAEFLEKHPKVE 270 (380)
T ss_pred -HHHHHHHHHHHHHHHHHHHHhCCCee
Confidence 45566666677777888888766554
No 244
>PRK08117 4-aminobutyrate aminotransferase; Provisional
Probab=99.90 E-value=4.2e-21 Score=183.62 Aligned_cols=352 Identities=18% Similarity=0.115 Sum_probs=215.9
Q ss_pred ccCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCC--CCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCCh
Q 014936 32 KNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGY--APTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGC 109 (415)
Q Consensus 32 ~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y--~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~ 109 (415)
.+|+.++|+..|......+ -.+|.+.+++.+++........ .......+|.+.+++++ +-..+.++++++|
T Consensus 40 ~dG~~ylD~~~g~~~~~lG-h~~p~v~~a~~~q~~~~~~~~~~~~~~~~~~~la~~L~~~~------~~~~~~v~f~~SG 112 (433)
T PRK08117 40 VDGKEYLDFTSGIAVANVG-HRHPKVVQAIKEQADKLMHGPSGVIYYESILKLAEELAEIT------PGGLDCFFFSNSG 112 (433)
T ss_pred CCCCEEEECCcchhhccCC-CCCHHHHHHHHHHHHhccCccccccCCHHHHHHHHHHHHhC------CCCCCEEEEeCcH
Confidence 3478899998875322211 2578999999999875322111 11122344555555543 1134689999999
Q ss_pred HHHHHHHHHHhc--CCCCEEEEcCCCCcchHHHHHhCCC--------------eEEEeeccCCC--CCC--------CCh
Q 014936 110 TQAIDVAMALLS--RPGANILLPRPGFPIYELSAAFRHI--------------EVRHFDLLPDK--GWE--------VDL 163 (415)
Q Consensus 110 ~~al~~~~~~l~--~~gd~vi~~~p~y~~~~~~~~~~g~--------------~~~~~~~~~~~--~~~--------~~~ 163 (415)
++|++.+++... ....+|+....+|++....+..... .+..+|..... .+. .++
T Consensus 113 seA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (433)
T PRK08117 113 AEAIEGALKLAKHVTKRPYIISFTGCFHGRTLGALSVTTSKSKYRKYYQPLLGSVYQAPYPYCDRCPKGEDPEVCFLECL 192 (433)
T ss_pred HHHHHHHHHHHHHhcCCCeEEEECCCcCCcCHHHHhhcCCCccccccCCCCCCCcEEeCCCccccccccCchhHHHHHHH
Confidence 999999998743 1125788888888876554322110 11122211000 000 144
Q ss_pred hHHHhhcC----CCceEEEecCC-CCccccC-CCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCe
Q 014936 164 DDIESLAD----QNTVALVIINP-GNPCGNV-YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPI 237 (415)
Q Consensus 164 ~~l~~~~~----~~~~~v~i~~p-~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~ 237 (415)
+.+++.++ ....+.+++.| ....|.+ .+.+.++++.++|++||+++|+||+|.++...|..... ..++..
T Consensus 193 ~~l~~~~~~~~~~~~~aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tG~gr~G~~~~~-~~~gv~--- 268 (433)
T PRK08117 193 RDLESLFKHQVTPEEVAAVIIEPVLGEGGYIVPPKSFLKKLREICDRHGILLIFDEVQTGFGRTGEWFAA-QTFGVV--- 268 (433)
T ss_pred HHHHHHHHhccCCCcEEEEEECCeeCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhccCccccchhH-hhcCCC---
Confidence 55666553 23456677777 5556765 57888999999999999999999999987666543221 222222
Q ss_pred EEEccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhh-ccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHH
Q 014936 238 LTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKY-FDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSV 316 (415)
Q Consensus 238 i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~ 316 (415)
..+.++||.++ +|+++|++++++ ++.+.+... ...+.+.+++++.++.+.|+...+ +...++++++.
T Consensus 269 pDi~t~sK~lg-~G~pigav~~~~--------~i~~~~~~~~~~~T~~~np~~~aaa~a~L~~l~~---~~l~~~~~~~g 336 (433)
T PRK08117 269 PDIMTIAKGIA-SGLPLSAVVASK--------ELMEQWPLGSHGTTFGGNPVACAAALATLEVIKE---EKLLDNANEMG 336 (433)
T ss_pred CCEeehhhhcc-CCCcceeEEEcH--------HHHhhccCCCCCCCCCcCHHHHHHHHHHHHHHHh---ccHHHHHHHHH
Confidence 22458999976 789999999865 576666443 223456789999999888875321 23444555555
Q ss_pred HHHHHHhhc----CCCCcCCCCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEe--eCC
Q 014936 317 DICYNKIKE----IPCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTF--AVD 390 (415)
Q Consensus 317 ~~l~~~l~~----~~~~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~--~~~ 390 (415)
+++.+.|++ ++.+. ..+..|.++.+.+..............+...+.++||.+.+... ..+.+|+++ .++
T Consensus 337 ~~l~~~L~~l~~~~~~~~--~vrg~Gl~~gi~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g~--~~~~lRl~p~~~~t 412 (433)
T PRK08117 337 AYALERLEVLKEKHPVIG--DVRGIGLMIGIEIVDPDGEPDGDAVEKILDKCLEKGLLFYLCGN--AGNVLRMIPPLTVT 412 (433)
T ss_pred HHHHHHHHHHHhcCCcee--eeecCCcEEEEEEecCCCCcchHHHHHHHHHHHHCCCEEeecCC--CCCEEEEeCCccCC
Confidence 555555554 32221 24556777777774321000001223334445678999876321 247899996 579
Q ss_pred hhhHHHHHHHHHHHHHHHHH
Q 014936 391 PYSLEECLDRIKSFYQRHAK 410 (415)
Q Consensus 391 ~~~l~~~l~~l~~~~~~~~~ 410 (415)
++++++++++|.++++++.+
T Consensus 413 ~~~i~~~~~~l~~~l~~~~~ 432 (433)
T PRK08117 413 KEEIDEGLDILDEALTEYEA 432 (433)
T ss_pred HHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999887643
No 245
>PRK07812 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.90 E-value=8.3e-21 Score=179.42 Aligned_cols=229 Identities=15% Similarity=0.094 Sum_probs=165.0
Q ss_pred CCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHH----HHhCCCeEEEee
Q 014936 77 AGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELS----AAFRHIEVRHFD 152 (415)
Q Consensus 77 ~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~----~~~~g~~~~~~~ 152 (415)
+....|++.+|++. ..+..+++++|++|+.+++.+++++||+|+++...|.+.... +...|+++..++
T Consensus 69 p~~~~Le~~lA~l~--------g~~~av~~sSG~aAi~~al~all~~Gd~Vv~~~~~y~~t~~~~~~~l~~~Gi~v~~vd 140 (436)
T PRK07812 69 PTQDVVEQRIAALE--------GGVAALLLASGQAAETFAILNLAGAGDHIVSSPRLYGGTYNLFHYTLPKLGIEVSFVE 140 (436)
T ss_pred chHHHHHHHHHHHh--------CCCeEEEEccHHHHHHHHHHHHhCCCCEEEEeCCcchHHHHHHHHHhhcCeEEEEEEC
Confidence 34678889999887 345678888999999999999999999999999999876543 344677777664
Q ss_pred ccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccC
Q 014936 153 LLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFG 232 (415)
Q Consensus 153 ~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~ 232 (415)
++ .|++.+++++++++++|++.+|+||+|.+. ++++|+++|+++|+++|+|++++.... ..++ .++
T Consensus 141 -d~-----~d~e~l~~ai~~~tklV~ie~~sNp~G~v~---Dl~~I~~la~~~gi~liVD~t~a~~~~----~~pl-~~G 206 (436)
T PRK07812 141 -DP-----DDLDAWRAAVRPNTKAFFAETISNPQIDVL---DIPGVAEVAHEAGVPLIVDNTIATPYL----IRPL-EHG 206 (436)
T ss_pred -CC-----CCHHHHHHhCCCCCeEEEEECCCCCCCeec---CHHHHHHHHHHcCCEEEEECCCccccc----CCch-hcC
Confidence 21 389999999999999999999999999995 578888888899999999999875221 1222 233
Q ss_pred CCCCeEEEccCccccCCCCceEEEEEeeCCCCCCC-----------------------hHHHHHHHH--hhccccCCchh
Q 014936 233 STVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFR-----------------------KPKVVERMK--KYFDILGDPAT 287 (415)
Q Consensus 233 ~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~-----------------------~~~~~~~~~--~~~~~~~~~~~ 287 (415)
.+ +++.|++|.++..|--+|++++.+....+. ++.+..+.+ .........++
T Consensus 207 aD---ivv~S~tK~lgg~G~~i~G~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~p 283 (436)
T PRK07812 207 AD---IVVHSATKYLGGHGTAIAGVIVDGGTFDWTQGRFPGFTTPDPSYHGVVFAELGPPAYALKARVQLLRDLGSAISP 283 (436)
T ss_pred CC---EEEEecccccCCCCCeEEEEEEcCCccccccccccccccCCcccccchhhhcchhHHHHHHHHHHHHhcCCCCCH
Confidence 33 777999999988887788877743211100 001111111 11233455666
Q ss_pred HHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCC
Q 014936 288 FIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKP 335 (415)
Q Consensus 288 ~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p 335 (415)
.....+..-|+. +..+.++..++...+.+.|++.|.+..+.+|
T Consensus 284 ~~a~l~~rgl~t-----L~~R~~~~~~nA~~la~~L~~~p~v~~V~yP 326 (436)
T PRK07812 284 FNAFLIAQGLET-----LSLRIERHVANAQRVAEFLEARDEVASVNYA 326 (436)
T ss_pred HHHHHHhcCcCc-----HHHHHHHHHHHHHHHHHHHHhCCCccEEECC
Confidence 666666666655 7788889999999999999998876545455
No 246
>PRK05994 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.90 E-value=1.1e-20 Score=179.20 Aligned_cols=227 Identities=16% Similarity=0.131 Sum_probs=165.1
Q ss_pred CcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHH----HHHhCCCeEEEeec
Q 014936 78 GLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYEL----SAAFRHIEVRHFDL 153 (415)
Q Consensus 78 g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~----~~~~~g~~~~~~~~ 153 (415)
...+|++.+|++. ..+..+++++|++|+.+++.+++++||+|+++.++|.+... .+...|+++..++.
T Consensus 64 ~~~~le~~lA~l~--------g~~~al~~~SG~~Ai~~al~all~pGd~VIv~~~~y~~t~~~~~~~~~~~G~~v~~vd~ 135 (427)
T PRK05994 64 TNAVLEERVAALE--------GGTAALAVASGHAAQFLVFHTLLQPGDEFIAARKLYGGSINQFGHAFKSFGWQVRWADA 135 (427)
T ss_pred cHHHHHHHHHHHh--------CCCcEEEEcCHHHHHHHHHHHHhCCCCEEEEecCcchhHHHHHHHHHHhcCcEEEEECC
Confidence 4578899999987 34468899999999999999999999999999999986443 35678999888764
Q ss_pred cCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCC
Q 014936 154 LPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS 233 (415)
Q Consensus 154 ~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~ 233 (415)
.|++.+++++++++++|++++|+||+|.+++ +++|+++|+++|+++|+|++++... ...++ .++.
T Consensus 136 -------~d~~~l~~ai~~~tklV~vesp~NptG~v~d---l~~I~~la~~~gi~livD~a~a~~~----~~~pl-~~ga 200 (427)
T PRK05994 136 -------DDPASFERAITPRTKAIFIESIANPGGTVTD---IAAIAEVAHRAGLPLIVDNTLASPY----LIRPI-EHGA 200 (427)
T ss_pred -------CCHHHHHHhcCcCCeEEEEECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCccccc----cCCcc-ccCC
Confidence 2789999999889999999999999999965 7788888999999999999997532 11222 2333
Q ss_pred CCCeEEEccCccccCCCCceEEEEEeeCCCCCC-Ch----------HH-----HH-----------HHHHhhccccCCch
Q 014936 234 TVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMF-RK----------PK-----VV-----------ERMKKYFDILGDPA 286 (415)
Q Consensus 234 ~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~-~~----------~~-----~~-----------~~~~~~~~~~~~~~ 286 (415)
+ +++.|++|.++.+|-.+|++++......+ .. +. +. ...+.........+
T Consensus 201 D---ivv~S~tK~lgg~~~~~gG~v~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~ 277 (427)
T PRK05994 201 D---IVVHSLTKFLGGHGNSMGGIIVDGGTFDWSKSGKYPMLSEPRPEYHGLVLHETFGNFAFAIAARVLGLRDLGPAIS 277 (427)
T ss_pred c---EEEEcCccccCCCCCcEEEEEEeCCccccccccccccccCCcchhhhhhHHHHhhhhhhHHHHHHHHHHhcCCCCC
Confidence 3 88899999988878777877663211100 00 00 11 11111222334456
Q ss_pred hHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCC
Q 014936 287 TFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKP 335 (415)
Q Consensus 287 ~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p 335 (415)
+.....+..-|+. +..+.++.+++...+.+.|+..|.+..+.+|
T Consensus 278 ~~~A~l~~~~l~t-----L~~r~~~~~~~a~~la~~L~~~p~v~~v~yP 321 (427)
T PRK05994 278 PFNAFLILTGIET-----LPLRMQRHSDNALAVAEWLKGHPKVSWVNYA 321 (427)
T ss_pred HHHHHHHHcCccc-----HHHHHHHHHHHHHHHHHHHHhCCCccEEECC
Confidence 6655655555654 7788888899999999999988776544444
No 247
>PRK07495 4-aminobutyrate aminotransferase; Provisional
Probab=99.90 E-value=9.3e-21 Score=179.67 Aligned_cols=350 Identities=17% Similarity=0.117 Sum_probs=213.8
Q ss_pred cCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCC-CCcEEEeCChHH
Q 014936 33 NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLT-PNDVFVTSGCTQ 111 (415)
Q Consensus 33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~-~~~i~i~~g~~~ 111 (415)
+|+.++|+..|...... --.+|.+.+++++++....+.. ......+.+..+++.+.+..+ -. .+.++++++|++
T Consensus 38 dG~~ylD~~~g~~~~~l-Gh~~p~v~~ai~~ql~~l~~~~--~~~~~~~~~~~la~~l~~~~p--~~~~~~v~f~~SGse 112 (425)
T PRK07495 38 EGRRYIDFAAGIAVVNT-GHRHPRVIAAVKAQLDRFTHTC--HQVVPYENYVRLAERLNALVP--GDFAKKTIFVTTGAE 112 (425)
T ss_pred CCCEEEEccccHHhhcc-CCCCHHHHHHHHHHHhhccCcc--cCccCCHHHHHHHHHHHHhCC--CCCCCEEEECCchHH
Confidence 48889999887532211 1247889999999987532211 101112334444555543222 11 268999999999
Q ss_pred HHHHHHHHhc--CCCCEEEEcCCCCcchHHHHHhC-CC-------------eEEEeeccCCCCCCCC----hhHHHhhcC
Q 014936 112 AIDVAMALLS--RPGANILLPRPGFPIYELSAAFR-HI-------------EVRHFDLLPDKGWEVD----LDDIESLAD 171 (415)
Q Consensus 112 al~~~~~~l~--~~gd~vi~~~p~y~~~~~~~~~~-g~-------------~~~~~~~~~~~~~~~~----~~~l~~~~~ 171 (415)
|++.+++... ....+|+....+|++....+... |. .+..++.+. ...+.+ ++.+++.+.
T Consensus 113 A~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~l~~~~~ 191 (425)
T PRK07495 113 AVENAVKIARAATGRSAVIAFGGGFHGRTFMGMSLTGKVVPYKVGFGAMMPDVYHVPFPV-ELHGVSVEQSLAALDKLFK 191 (425)
T ss_pred HHHHHHHHHHHhhCCCeEEEECCCcCCccHHHhhhcCCCcccccCCCCCCCCeEEecCCc-ccccccHHHHHHHHHHHHH
Confidence 9999998754 12357898999998865443221 10 122233211 111122 444566553
Q ss_pred ----CCceEEEecCC-CCcccc-CCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCcc
Q 014936 172 ----QNTVALVIINP-GNPCGN-VYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSK 245 (415)
Q Consensus 172 ----~~~~~v~i~~p-~nptG~-~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK 245 (415)
....+.++..| +..+|. .+|.+.+++|.++|++||+++|+||++.++...|.. .....+ +.+..+.++||
T Consensus 192 ~~~~~~~iaavi~EPv~g~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~-~a~~~~---gv~pDi~tlsK 267 (425)
T PRK07495 192 ADVDPQRVAAIIIEPVQGEGGFYPAPAAFMKALRELCDQHGILLIADEVQTGFARTGKL-FAMEHH---EVAADLTTMAK 267 (425)
T ss_pred hccCCCceEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhcCCcCCCc-eeeccc---CCCCCEEeehh
Confidence 23455667777 333774 579999999999999999999999999987665542 112222 22345678999
Q ss_pred ccCCCCceEEEEEeeCCCCCCChHHHHHHHHhh-ccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhh
Q 014936 246 RWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKY-FDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIK 324 (415)
Q Consensus 246 ~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~ 324 (415)
.+ .+|+++|++++++ ++.+.+... ...+++.+++++.++.+.|+...+. +..++++++.+++.+.|+
T Consensus 268 ~l-~~G~pigav~~~~--------~i~~~~~~~~~~~T~~~~pl~~aaa~a~l~~l~~~---~l~~~~~~~g~~l~~~L~ 335 (425)
T PRK07495 268 GL-AGGFPLAAVTGRA--------EIMDAPGPGGLGGTYGGNPLGIAAAHAVLDVIEEE---DLCERANQLGNRLKQRLA 335 (425)
T ss_pred hh-cCCccceEEEEcH--------HHHhccCCCCcCCCCCCCHHHHHHHHHHHHHHHhc---hHHHHHHHHHHHHHHHHH
Confidence 96 4789999999965 566665443 2345678899999777776542211 233444444444444444
Q ss_pred c----CCCCcCCCCCCCceEEEEecCccccCCCCCH--HHHHHHHHhhcCeEEEcCCCCCCCCeEEEEe--eCChhhHHH
Q 014936 325 E----IPCISCPHKPEGSMAVMLKLNLSLLDDIIDD--IDFCFKLAKEESVIILPGTAVGLKNWLRVTF--AVDPYSLEE 396 (415)
Q Consensus 325 ~----~~~~~~~~~p~~g~~~~~~l~~~~~~~~~~~--~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~--~~~~~~l~~ 396 (415)
+ +|.+.. ....|+++|+.+...... ..+. ...+...+.++|+.+.+.... .+.+||.. ..+++++++
T Consensus 336 ~l~~~~~~i~~--vrG~Gl~~~iel~~~~~~-~~~~~~~~~~~~~~~~~Gvl~~~~g~~--~~~~r~~Ppl~it~~~id~ 410 (425)
T PRK07495 336 SLRETVPEIAD--IRGPGFMNAVEFNDADSG-LPSAEFANRVRLKALEKGLILLTCGVH--GNVIRFLAPITIQDDVFAE 410 (425)
T ss_pred HHHhhCCCeee--eecCceEEEEEEecCCCC-CccHHHHHHHHHHHHHCCeEEeecCCC--CCEEEEeCCCccCHHHHHH
Confidence 3 443331 234489999988532110 0111 222333445679998763221 37899998 478999999
Q ss_pred HHHHHHHHHHHHH
Q 014936 397 CLDRIKSFYQRHA 409 (415)
Q Consensus 397 ~l~~l~~~~~~~~ 409 (415)
++++|.++++++.
T Consensus 411 ~~~~l~~~l~~~~ 423 (425)
T PRK07495 411 ALDILEASILEAS 423 (425)
T ss_pred HHHHHHHHHHHHh
Confidence 9999999998754
No 248
>PRK06058 4-aminobutyrate aminotransferase; Provisional
Probab=99.90 E-value=2e-20 Score=178.90 Aligned_cols=350 Identities=16% Similarity=0.109 Sum_probs=215.9
Q ss_pred cCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHH
Q 014936 33 NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQA 112 (415)
Q Consensus 33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~a 112 (415)
+|+.++|+..|.-.... --.+|.+.+++++++....+..+ .....+.+..+|+.+.+..+. ...+.++++++|++|
T Consensus 54 dG~~ylD~~~g~~~~~l-Gh~~p~v~~ai~~q~~~~~~~~~--~~~~~~~~~~la~~l~~~~p~-~~~~~v~f~~sGseA 129 (443)
T PRK06058 54 DGNRLIDLGSGIAVTSV-GNSAPRVVEAVREQVARFTHTCF--MVTPYEGYVAVAEQLNRLTPG-DHEKRSALFNSGAEA 129 (443)
T ss_pred CCCEEEEcCcchhhhcc-CCCCHHHHHHHHHHHHhccCccc--cccCCHHHHHHHHHHHHhCCC-CCCCEEEEeCCcHHH
Confidence 47788888777422111 12478999999999875322122 112245566666666543321 112589999999999
Q ss_pred HHHHHHHhc--CCCCEEEEcCCCCcchHHHHHhCCC--------------eEEEeecc-CCCC---CCC--------Chh
Q 014936 113 IDVAMALLS--RPGANILLPRPGFPIYELSAAFRHI--------------EVRHFDLL-PDKG---WEV--------DLD 164 (415)
Q Consensus 113 l~~~~~~l~--~~gd~vi~~~p~y~~~~~~~~~~g~--------------~~~~~~~~-~~~~---~~~--------~~~ 164 (415)
++.+++... ...++|+....+|++....+..... .+..++.. +.++ ... .++
T Consensus 130 ~e~AlklAr~~tgr~~ii~~~~~yHG~t~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (443)
T PRK06058 130 VENAVKIARSYTGRQAVVVFDHAYHGRTNLTMALTAKSMPYKSGFGPFAPEVYRAPMSYPYRDPKGLATDGEEAAARAIT 209 (443)
T ss_pred HHHHHHHHHHhhCCCeEEEECCCcCcChHHHHhhcCCCcccccccCCCCCCceEcCCCcccccccccccchHHHHHHHHH
Confidence 999998542 1237899999999988766543211 11112211 0000 000 123
Q ss_pred HHHhhcCCCceEEEecCCCCcc-ccC-CCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEcc
Q 014936 165 DIESLADQNTVALVIINPGNPC-GNV-YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGS 242 (415)
Q Consensus 165 ~l~~~~~~~~~~v~i~~p~npt-G~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s 242 (415)
.+++.+.....+.++..|.+.. |.. .+.+.+++|.++|++||+++|.||++.++...|.... ...++..++++ +
T Consensus 210 ~l~~~~~~~~iAavi~EPi~g~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~tGfgRtG~~fa-~~~~gv~PDiv---~ 285 (443)
T PRK06058 210 VIEKQVGADNLAAVIIEPIQGEGGFIVPAEGFLPALLEWCRENGVVFIADEVQTGFARTGAWFA-CEHEGIVPDLI---T 285 (443)
T ss_pred HHHHhhCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcChhhhH-HHhcCCCCCEE---E
Confidence 3444444344566778885544 544 5688999999999999999999999998766654321 12233332333 4
Q ss_pred CccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhh-ccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHH
Q 014936 243 LSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKY-FDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYN 321 (415)
Q Consensus 243 ~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~ 321 (415)
++|.++ +|+++|++++++ ++.+.+... ...+++.+++++.++.+.|+...+ ++..++++++.+++.+
T Consensus 286 ~gK~l~-~G~Pi~av~~~~--------~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~~~~~---~~l~~~~~~~g~~l~~ 353 (443)
T PRK06058 286 TAKGIA-GGLPLSAVTGRA--------EIMDAPHPGGLGGTYGGNPVACAAALAAIETIEE---DDLVARARQIEALMTD 353 (443)
T ss_pred Eccccc-CCCccEEEEEcH--------HHHhhccCCCCCCCCCCCHHHHHHHHHHHHHHHH---cCHHHHHHHHHHHHHH
Confidence 589976 789999999865 677766544 334677899999999999865322 2345566666666666
Q ss_pred HhhcC----CCCcCCCCCCCceEEEEecCcccc--CCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEe--eCChhh
Q 014936 322 KIKEI----PCISCPHKPEGSMAVMLKLNLSLL--DDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTF--AVDPYS 393 (415)
Q Consensus 322 ~l~~~----~~~~~~~~p~~g~~~~~~l~~~~~--~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~--~~~~~~ 393 (415)
.|+++ +.+. . ....|.++.+.+..... ++......+...+ .++||.+.++..++ +++|+.+ ..++++
T Consensus 354 ~L~~l~~~~~~i~-~-vrg~G~~~~i~~~~~~~~~~~~~~~~~l~~~~-~~~Gv~~~~~~~~~--~~lr~~Ppl~~t~~~ 428 (443)
T PRK06058 354 RLRALAAEDDRIG-D-VRGRGAMIAIELVKPGTTEPDAELTKALAAAA-HAAGVIVLTCGTYG--NVIRLLPPLVIGDEL 428 (443)
T ss_pred HHHHHHhhCCcEE-e-eeccceEEEEEEecCCCCCCcHHHHHHHHHHH-HHCCeEEeccCCCC--CEEEEECCCccCHHH
Confidence 66653 2222 1 23445566555532110 0000122333443 56799998865443 6899976 579999
Q ss_pred HHHHHHHHHHHHHH
Q 014936 394 LEECLDRIKSFYQR 407 (415)
Q Consensus 394 l~~~l~~l~~~~~~ 407 (415)
+++++++|.+++++
T Consensus 429 i~~~~~~l~~~l~~ 442 (443)
T PRK06058 429 LREGLDVLEAALAD 442 (443)
T ss_pred HHHHHHHHHHHHHh
Confidence 99999999998864
No 249
>COG0399 WecE Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=99.90 E-value=2.9e-20 Score=168.83 Aligned_cols=311 Identities=20% Similarity=0.209 Sum_probs=216.0
Q ss_pred CcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhc-CCCCEEEEcC
Q 014936 53 TTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLS-RPGANILLPR 131 (415)
Q Consensus 53 ~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~-~~gd~vi~~~ 131 (415)
.....++++.+.++++.+.. ++ -..++++++++|+ .....+.++++|.|+.++++++. ++||+||+++
T Consensus 13 i~~~e~~~v~~vl~sg~i~~-G~--~v~~FE~~~ae~~--------G~k~ava~~sgT~AL~laL~al~ig~GDeVI~ps 81 (374)
T COG0399 13 IGEEELAAVQEVLKSGWLTG-GP--FVRRFEQAFAEYL--------GVKYAVAVSSGTAALHLALLALAIGPGDEVIVPS 81 (374)
T ss_pred cchHHHHHHHHHHHcCCeec-Ch--HHHHHHHHHHHHh--------CCCeEEEecChHHHHHHHHHhcCCCCCCEEEecC
Confidence 34778888999998877644 54 3589999999998 67899999999999999999764 8999999999
Q ss_pred CCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEE
Q 014936 132 PGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIA 211 (415)
Q Consensus 132 p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~ 211 (415)
.+|....+.....|++++.+++++ +.+.+|++.+|+++++++|+|+.+|- .|.. .++.+|.++|++||++||+
T Consensus 82 ~TfvATan~i~~~Ga~PVFvDid~-~T~nid~~~ie~aIt~~tKAIipVhl---~G~~---~dm~~i~~la~~~~l~vIE 154 (374)
T COG0399 82 FTFVATANAVLLVGAKPVFVDIDP-DTLNIDPDLIEAAITPRTKAIIPVHL---AGQP---CDMDAIMALAKRHGLPVIE 154 (374)
T ss_pred CchHHHHHHHHHcCCeEEEEecCC-cccCCCHHHHHHHcccCCeEEEEehh---ccCC---CCHHHHHHHHHHcCCeEEE
Confidence 999999999999999999999987 45789999999999999999998875 3555 4788888999999999999
Q ss_pred ccccCCcc-cCCCCcccccccCCCCCeEEEccCc--cccCCCCceEEEEEeeCCCCCCChHHHHHHHHhhccccCC----
Q 014936 212 DEVYGHLV-FGDKPFVPMGVFGSTVPILTLGSLS--KRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILGD---- 284 (415)
Q Consensus 212 De~~~~~~-~~~~~~~~~~~~~~~~~~i~~~s~s--K~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 284 (415)
|.+++.+. +.|+... +++. +.++||. |.+... -.|.+++++ ++++++++....+...
T Consensus 155 DaAqa~Ga~y~gk~vG---t~Gd----~~~fSF~~~K~ittg--EGGav~tnd-------~ela~k~~~lr~hG~~~~~~ 218 (374)
T COG0399 155 DAAQAHGATYKGKKVG---SFGD----IGAFSFHATKNLTTG--EGGAVVTND-------EELAEKARSLRNHGLSRDAV 218 (374)
T ss_pred EcchhccCeecCcccc---cccc----eEEEEecCCCCcccc--CceEEEeCC-------HHHHHHHHHHHHhCcCCCcc
Confidence 99999876 5555333 3333 4455554 775443 347777755 4677777665432211
Q ss_pred -------------chhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCc---e-EEEEecCc
Q 014936 285 -------------PATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGS---M-AVMLKLNL 347 (415)
Q Consensus 285 -------------~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g---~-~~~~~l~~ 347 (415)
.+.+..+....-| +.+++..++-++..+...+.|++++++.....+.+. + .+.+.++.
T Consensus 219 ~~y~~~~~G~N~rm~~iqAAigl~QL-----~~l~~~~~~R~~~a~~Y~~~l~~~~~~~~p~~~~~~~~~~~~~~i~~~~ 293 (374)
T COG0399 219 FKYLHEELGYNYRLTEIQAAIGLAQL-----ERLDEINERRREIAQIYAEALKGLPGITLPPEPDGAVHAWHLYTILVDE 293 (374)
T ss_pred ccceeeecccccCHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCCceeeeeeeEEEecC
Confidence 1111122222222 446777777778888888888887665533233332 2 22233432
Q ss_pred cccCCCCCHHHHHHHHHhhcCe----EEEcCCCC--------C---C--------CCeEEEEe--eCChhhHHHHHHHHH
Q 014936 348 SLLDDIIDDIDFCFKLAKEESV----IILPGTAV--------G---L--------KNWLRVTF--AVDPYSLEECLDRIK 402 (415)
Q Consensus 348 ~~~~~~~~~~~~~~~ll~~~gi----~v~~g~~~--------~---~--------~~~iRi~~--~~~~~~l~~~l~~l~ 402 (415)
. . ...+.+...|++.|| ...|-..+ . . ...+.+-+ ..+++++++.++.|.
T Consensus 294 ~----~-~~R~~l~~~L~~~gi~~~~~~~P~~~~~~~~~~~~~~~~~lp~ae~~~~r~l~LP~~p~l~~~~~~~V~~~l~ 368 (374)
T COG0399 294 E----G-ISRDALMESLKEAGVGAVVYFRPLHLQPAYRQLGYFPEGDLPNAEDLSERILSLPLHPNLSEEDVDRVIEALK 368 (374)
T ss_pred C----C-CCHHHHHHHHHhCCCCceEEeeccccchhhhcccccccCCCchHHHHhhCeEEccCCCCCCHHHHHHHHHHHH
Confidence 1 0 223344455577754 44442211 0 0 24566666 478999999999999
Q ss_pred HHHHH
Q 014936 403 SFYQR 407 (415)
Q Consensus 403 ~~~~~ 407 (415)
+++.+
T Consensus 369 ~~~~~ 373 (374)
T COG0399 369 EVLGS 373 (374)
T ss_pred HHhcc
Confidence 88753
No 250
>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase. This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.
Probab=99.90 E-value=2.6e-20 Score=175.71 Aligned_cols=308 Identities=19% Similarity=0.179 Sum_probs=205.0
Q ss_pred cHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHh-cCCCCEEEEcCC
Q 014936 54 THVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALL-SRPGANILLPRP 132 (415)
Q Consensus 54 ~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l-~~~gd~vi~~~p 132 (415)
.+.-++++.+.+..+.+ .++ ....++|++++++++ .++.++++|+++|+.+++.++ .++||+|+++.+
T Consensus 9 ~~~~~~~v~~~~~~~~~-~~g--~~~~~le~~la~~~g--------~~~~v~~~sgt~al~~~l~al~~~~Gd~Viv~~~ 77 (380)
T TIGR03588 9 DQDDIDAVVEVLKSDFL-TQG--PTVPAFEEALAEYVG--------AKYAVAFNSATSALHIACLALGVGPGDRVWTTPI 77 (380)
T ss_pred CHHHHHHHHHHHhcCCc-cCC--hhHHHHHHHHHHHHC--------CCeEEEEcCHHHHHHHHHHHcCCCCCCEEEeCCc
Confidence 35557778887775432 233 356899999999983 245667778999999999998 789999999999
Q ss_pred CCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcC----CCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcE
Q 014936 133 GFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLAD----QNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTL 208 (415)
Q Consensus 133 ~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~----~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~ 208 (415)
+|..+...+...|++++.++++++ ++.+|++++++.++ +++++|++++ ++|.. .++++|.++|+++|++
T Consensus 78 ~~~~~~~~~~~~G~~~~~~~~~~~-~~~~d~~~l~~~i~~~~~~~t~~v~~~~---~~G~~---~~~~~i~~l~~~~~~~ 150 (380)
T TIGR03588 78 TFVATANCALYCGAKVDFVDIDPD-TGNIDEDALEKKLAAAKGKLPKAIVPVD---FAGKS---VDMQAIAALAKKHGLK 150 (380)
T ss_pred chHHHHHHHHHcCCEEEEEecCCC-cCCcCHHHHHHHhhcccCCCceEEEEeC---CCCcc---CCHHHHHHHHHHcCCE
Confidence 999999999999999999998653 46789999999998 6788887655 57877 4578888999999999
Q ss_pred EEEccccCCcc-cCCCCcccccc--cCCCCCeEEEccCc--cccCCCCceEEEEEeeCCCCCCChHHHHHHHHhhccccC
Q 014936 209 VIADEVYGHLV-FGDKPFVPMGV--FGSTVPILTLGSLS--KRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILG 283 (415)
Q Consensus 209 li~De~~~~~~-~~~~~~~~~~~--~~~~~~~i~~~s~s--K~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (415)
+|+|++|+.+. +.+. ++.. ++ .+.+.|++ |.++.+ ..|++++.+ +++.++++.......
T Consensus 151 lI~D~a~a~g~~~~~~---~~g~~~~~----d~~~~S~~~~K~~~~~--~GG~v~~~~-------~~~~~~~~~~~~~g~ 214 (380)
T TIGR03588 151 IIEDASHALGAEYGGK---PVGNCRYA----DATVFSFHPVKIITTA--EGGAVTTND-------EELAERMRLLRSHGI 214 (380)
T ss_pred EEEECCCcccCccCCE---eCCCcccc----ceEEEecCCCCccccc--CceEEEECC-------HHHHHHHHHHHHCCC
Confidence 99999998754 3332 2222 22 26666776 876443 357777654 246665554321110
Q ss_pred --------------------------CchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCC
Q 014936 284 --------------------------DPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEG 337 (415)
Q Consensus 284 --------------------------~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~ 337 (415)
..+.+........| ..+++..++.+++.+++.+.|..+|++.....+.+
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~g~n~~m~~l~aa~g~~qL-----~~l~~~~~~r~~~~~~~~~~L~~~~~~~~~~~~~~ 289 (380)
T TIGR03588 215 TKDPLLFEKQDEGPWYYEQQELGFNYRMTDIQAALGLSQL-----KKLDRFVAKRREIAARYDRLLKDLPYFTPLTIPLG 289 (380)
T ss_pred CCCcccccccccCcceeeeeccccccCccHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHhcCCCCccCCCCCCC
Confidence 01111111122223 23677778888888999999998876663312211
Q ss_pred ---ce-EEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCC-----------CC----------CCeEEEEee--CC
Q 014936 338 ---SM-AVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAV-----------GL----------KNWLRVTFA--VD 390 (415)
Q Consensus 338 ---g~-~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~-----------~~----------~~~iRi~~~--~~ 390 (415)
.+ ...+.++.. .+ .+..++...| +++||.+.....+ .. ...+++.+. .+
T Consensus 290 ~~~~~~~~~i~~~~~--~~-~~r~~l~~~L-~~~gI~~~~~~~~~~~~~~~~~~~~~~~~p~a~~~~~~~l~lP~~~~l~ 365 (380)
T TIGR03588 290 SKSAWHLYPILLDQE--FG-CTRKEVFEAL-RAAGIGVQVHYIPVHLQPYYRQGFGDGDLPSAENFYLAEISLPLHPALT 365 (380)
T ss_pred CEeEEEEEEEEECCc--CC-CCHHHHHHHH-HHCCCCcccCCcccccChhhhccCCcCCCcHHHHHHhceEEcCCCCCCC
Confidence 12 222334321 01 1345555554 7789988643211 00 245777773 68
Q ss_pred hhhHHHHHHHHHHH
Q 014936 391 PYSLEECLDRIKSF 404 (415)
Q Consensus 391 ~~~l~~~l~~l~~~ 404 (415)
+++++..++.|+++
T Consensus 366 ~~dv~~i~~~l~~~ 379 (380)
T TIGR03588 366 LEQQQRVVETLRKV 379 (380)
T ss_pred HHHHHHHHHHHHHh
Confidence 89999999988875
No 251
>COG0160 GabT 4-aminobutyrate aminotransferase and related aminotransferases [Amino acid transport and metabolism]
Probab=99.89 E-value=3.2e-20 Score=171.59 Aligned_cols=350 Identities=18% Similarity=0.133 Sum_probs=223.3
Q ss_pred ccCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCC--CCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCCh
Q 014936 32 KNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKF--NGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGC 109 (415)
Q Consensus 32 ~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~--~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~ 109 (415)
.+|+.++||..|...... --.+|.+.+|+++++..-.+ ..|..+ +....+|+.+.+..... ..+.++++++|
T Consensus 53 vdG~~ylDf~sgi~v~~~-GH~hP~Vv~Av~~q~~~~~h~~~~~~~~----e~~v~~ae~L~~~~p~~-~~~~~~f~~sG 126 (447)
T COG0160 53 VDGNEYLDFLSGIAVLNL-GHNHPRVVEAVKRQLAKLNHTHTRDLYY----EPYVELAEKLTALAPGS-GLKKVFFGNSG 126 (447)
T ss_pred CCCCEEEEcccCcchhcc-CCCCHHHHHHHHHHHHHhhcccCCcccc----hhHHHHHHHHHHhCCcc-cCCeEEecCCc
Confidence 458899999997544322 12589999999998875432 233332 34444444444322211 45689999999
Q ss_pred HHHHHHHHHHhc--CCCCEEEEcCCCCcchHHHHHhC-C-------------CeEEEeeccC--CCCCCC--------Ch
Q 014936 110 TQAIDVAMALLS--RPGANILLPRPGFPIYELSAAFR-H-------------IEVRHFDLLP--DKGWEV--------DL 163 (415)
Q Consensus 110 ~~al~~~~~~l~--~~gd~vi~~~p~y~~~~~~~~~~-g-------------~~~~~~~~~~--~~~~~~--------~~ 163 (415)
++|++.+++... .....||.....|++....+... | ..+..+|... .+.+.. ..
T Consensus 127 aeA~E~AiKiAr~~Tgr~~viaf~~afHG~T~galslT~~~~~~~~~~~~~~~~v~~~Pyp~~yr~p~~~~~~~~~~~~~ 206 (447)
T COG0160 127 AEAVEAAIKIARAYTGRPGVIAFDGAFHGRTLGALSLTGSKPPYKAGFGPLPPGVYHVPYPNPYRCPFGIGGEECGDDAL 206 (447)
T ss_pred HHHHHHHHHHHHHHhCCCcEEEECCcccccchhhHHhccCccccccCCCCCCCCeEEecCCccccCcccCchhhhhHHHH
Confidence 999999999864 23367888888888755443221 1 1234444321 111111 23
Q ss_pred hHHHhhcC-----CCceEEEecCC-CCccccC-CCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCC
Q 014936 164 DDIESLAD-----QNTVALVIINP-GNPCGNV-YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVP 236 (415)
Q Consensus 164 ~~l~~~~~-----~~~~~v~i~~p-~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~ 236 (415)
+.++..+. +...+.++..| +...|.+ .|.+.++++.++|++||+++|+||++.++..+| ....+..++..+.
T Consensus 207 ~~~e~~i~~~~~~~~~vAaiI~EpIQgegG~~v~p~~fl~~l~~~~~~~gillI~DEVQtG~GRTG-~~fa~E~~gv~PD 285 (447)
T COG0160 207 EYIERALFDLEVGPEEVAAIIIEPIQGEGGIIVPPKGFLKALRKLCREHGILLIADEVQTGFGRTG-KMFAFEHFGVEPD 285 (447)
T ss_pred HHHHHHHHhhcCCCCceeEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCccc-cchhhhhcCCCCC
Confidence 33444331 23456677777 6777765 788889999999999999999999999998887 3334444443333
Q ss_pred eEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhhccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHH
Q 014936 237 ILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSV 316 (415)
Q Consensus 237 ~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~ 316 (415)
+| +++|.++. |+++|.++.+. ++.+........++..|+++.+++.+.|+...++ .+.++..+.-
T Consensus 286 iv---t~aK~ig~-G~Pl~avv~r~--------ei~~~~~g~~~~Tf~GNpva~Aaa~AvL~vie~e---~L~~~a~~~G 350 (447)
T COG0160 286 IV---TLAKSLGG-GLPLSAVVGRA--------EIMDWPPGGHGGTFGGNPVACAAALAVLDVIEEE---NLLERAAELG 350 (447)
T ss_pred EE---EecccccC-CCceeEEeccH--------HhcccCCcccCCCCCcCHHHHHHHHHHHHHHHHc---cHHHHHHHHH
Confidence 44 67899655 99999999865 5666222223446788999999999999753322 4445555555
Q ss_pred HHHHHHhhc----CCCCcCCCCCCCceEEEEecCcccc---CCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEe--
Q 014936 317 DICYNKIKE----IPCISCPHKPEGSMAVMLKLNLSLL---DDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTF-- 387 (415)
Q Consensus 317 ~~l~~~l~~----~~~~~~~~~p~~g~~~~~~l~~~~~---~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~-- 387 (415)
+++.+.|.+ .|.+. . ...-|+++-+++....- ++......++.+ +.+.|+.+..+..+ .+.|||..
T Consensus 351 ~~l~~~L~~l~~~~~~Ig-d-VRG~Glm~giE~v~d~~t~~p~~~~~~~i~~~-~~~~Glil~~~G~~--~nviRi~PPL 425 (447)
T COG0160 351 EYLRDRLEELQEKHPLIG-D-VRGLGLMIGVELVKDRDTKEPDAELAAKIVAR-AFERGLLLLTCGPH--GNVLRILPPL 425 (447)
T ss_pred HHHHHHHHHHHhhcCcee-c-ccccceEEEEEEecCCCCCCCCHHHHHHHHHH-HHHcCCEEeccCCC--CcEEEEeCCc
Confidence 555555543 44333 2 34557888777754211 111112344444 46679988765433 37899998
Q ss_pred eCChhhHHHHHHHHHHHHHHH
Q 014936 388 AVDPYSLEECLDRIKSFYQRH 408 (415)
Q Consensus 388 ~~~~~~l~~~l~~l~~~~~~~ 408 (415)
..++++++.++++|.+++++.
T Consensus 426 ~is~e~~d~~l~il~~al~~~ 446 (447)
T COG0160 426 TISDEELDEGLDILEEALKEA 446 (447)
T ss_pred ccCHHHHHHHHHHHHHHHHhh
Confidence 568999999999999998763
No 252
>PRK09264 diaminobutyrate--2-oxoglutarate aminotransferase; Validated
Probab=99.89 E-value=2.7e-20 Score=177.16 Aligned_cols=353 Identities=18% Similarity=0.133 Sum_probs=212.5
Q ss_pred ccCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCC-cEEE-eCCh
Q 014936 32 KNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPN-DVFV-TSGC 109 (415)
Q Consensus 32 ~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~-~i~i-~~g~ 109 (415)
.+|+.++||..|.-.... --.+|.+.+++++++....+ .... ....+.+..+++.+.+....+-..+ .+++ +++|
T Consensus 36 ~dG~~ylD~~~g~~~~~l-Gh~~p~v~~ai~~ql~~~~~-~~~~-~~~~~~~~~lae~l~~~~~~~~~~~~~~~f~~~sG 112 (425)
T PRK09264 36 EDGKEYIDFFAGAGALNY-GHNNPVLKQALIDYLQRDGI-THGL-DMHTTAKREFLETFEETILKPRGLDYKVQFTGPTG 112 (425)
T ss_pred CCCCEeeecccchhhccC-CCCCHHHHHHHHHHHHhccc-cccc-ccCcHHHHHHHHHHHHhhcCCcCCCceEEEeCCCH
Confidence 358889999888533221 12578999999998874211 1111 1112444555555543211111122 5655 5899
Q ss_pred HHHHHHHHHHhcC-CC-CEEEEcCCCCcchHHHHHhC-C---------C---eEEEeeccCCCC-CCCChhHHHhhcCC-
Q 014936 110 TQAIDVAMALLSR-PG-ANILLPRPGFPIYELSAAFR-H---------I---EVRHFDLLPDKG-WEVDLDDIESLADQ- 172 (415)
Q Consensus 110 ~~al~~~~~~l~~-~g-d~vi~~~p~y~~~~~~~~~~-g---------~---~~~~~~~~~~~~-~~~~~~~l~~~~~~- 172 (415)
++|++.+++.... .| .+|+....+|++....+... + . .+..+|.+.... ..-|++.+++.+.+
T Consensus 113 seA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~l~~~ 192 (425)
T PRK09264 113 TNAVEAALKLARKVTGRTNIVAFTNGFHGMTLGSLAVTGNSHKRQGAGVPLNNVTRMPYDGYFGGDVDTLAYLEKLLEDS 192 (425)
T ss_pred HHHHHHHHHHHHHhcCCCeEEEECCccCCccHHHHHhcCCcccccCCCCCCCCeEEeCCCCccccchhHHHHHHHHHHhc
Confidence 9999999988641 22 57888899998876544322 1 0 122233211000 00256777877742
Q ss_pred ----CceEEEecCC-CCcccc-CCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccc
Q 014936 173 ----NTVALVIINP-GNPCGN-VYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKR 246 (415)
Q Consensus 173 ----~~~~v~i~~p-~nptG~-~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~ 246 (415)
...+.+++.| ....|. +++.+.+++|.++|++||+++|+||++.++...|... ....++..+.+ .+++|.
T Consensus 193 ~~~~~~~aavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GrtG~~~-~~~~~~v~PDi---~t~~K~ 268 (425)
T PRK09264 193 SSGVDLPAAVIVETVQGEGGINVASAEWLQRLAKLCRKHDILLIVDDIQAGCGRTGTFF-SFERAGITPDI---VTLSKS 268 (425)
T ss_pred cCCCCceEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCcEEEEechhhCCccccHHH-HHhhcCCCCCE---EEeccc
Confidence 2345667777 555676 5789999999999999999999999999876555322 12222222223 367899
Q ss_pred cCCCCceEEEEEeeCCCCCCChHHHHHHHHhh-ccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhc
Q 014936 247 WIVPGWRLGWFVTTDPCGMFRKPKVVERMKKY-FDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKE 325 (415)
Q Consensus 247 ~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 325 (415)
++..|+++|++++++ ++ ..+... ...++..++++..++.+.++... .-.+..++++++.+++.+.|++
T Consensus 269 l~~~G~pigav~~~~--------~i-~~~~~~~~~~T~~gnp~~~aaa~a~l~~~~--~~~~l~~~~~~~g~~l~~~l~~ 337 (425)
T PRK09264 269 ISGYGLPMALVLIKP--------EL-DVWKPGEHNGTFRGNNLAFVTATAALEEYW--SDDAFEKEVKAKGELVRERLEE 337 (425)
T ss_pred cCCCccceEEEEEch--------hh-hccCCCccCCCCCCCHHHHHHHHHHHHHHH--hhhHHHHHHHHHHHHHHHHHHH
Confidence 776699999999975 33 223221 22345567777777666663210 0113445555555555555543
Q ss_pred ----CCCCcCCCCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEee--CChhhHHHHHH
Q 014936 326 ----IPCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFA--VDPYSLEECLD 399 (415)
Q Consensus 326 ----~~~~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~--~~~~~l~~~l~ 399 (415)
.|.+. ...+..|+++++.++.. .....+... +.++||.+.+...+ ...||+++. .++++++++++
T Consensus 338 l~~~~~~~~-~~vrg~Gl~~~i~l~~~-----~~~~~l~~~-~~~~Gv~~~~~~~~--~~~lr~~p~l~~t~~ei~~~~~ 408 (425)
T PRK09264 338 IAAKYPGLG-AEVRGRGMMQGIDFGDG-----ELAGKIAAE-AFENGLIIETSGPE--DEVVKLLPPLTIDEEELEEGLD 408 (425)
T ss_pred HHHhCCCce-ecceecccEEEEEecCh-----HHHHHHHHH-HHHCCCEEeccCCC--CCEEEEeCCCCCCHHHHHHHHH
Confidence 33321 22355688889888531 123345544 45679999875432 367888875 78999999999
Q ss_pred HHHHHHHHHHHH
Q 014936 400 RIKSFYQRHAKQ 411 (415)
Q Consensus 400 ~l~~~~~~~~~~ 411 (415)
+|.+++++..++
T Consensus 409 ~l~~~l~~~~~~ 420 (425)
T PRK09264 409 ILEEAVAEVLAE 420 (425)
T ss_pred HHHHHHHHHHhc
Confidence 999999876543
No 253
>PRK05964 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.89 E-value=8.9e-21 Score=180.79 Aligned_cols=348 Identities=16% Similarity=0.119 Sum_probs=213.0
Q ss_pred ccCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHH
Q 014936 32 KNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQ 111 (415)
Q Consensus 32 ~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~ 111 (415)
.+|+.++||..|.-....+ -.+|++.+++++++.......+.. -..+.+..+|+.+.+..+ -..+.++++++|++
T Consensus 39 ~dG~~ylD~~~g~~~~~lG-h~~p~v~~ai~~q~~~~~~~~~~~--~~~~~~~~la~~l~~~~p--~~~~~v~f~~sGse 113 (423)
T PRK05964 39 ADGRELIDAISSWWVATHG-HNHPYIDQAIREQLDRLDHVIFAG--FTHEPAERLAQRLVALTP--GGLDHVFFSDSGSV 113 (423)
T ss_pred CCCCEEEEcchhHHhccCC-CCCHHHHHHHHHHHhhCCCccccc--cCCHHHHHHHHHHHHhCC--CCCCEEEEeCCcHH
Confidence 3588999998875322111 247999999999987533211110 012344555555544322 12468999999999
Q ss_pred HHHHHHHHhcC-------CC-CEEEEcCCCCcchHHHHHhCCCe-------------EEEeeccCCCCCCCChhHHHhhc
Q 014936 112 AIDVAMALLSR-------PG-ANILLPRPGFPIYELSAAFRHIE-------------VRHFDLLPDKGWEVDLDDIESLA 170 (415)
Q Consensus 112 al~~~~~~l~~-------~g-d~vi~~~p~y~~~~~~~~~~g~~-------------~~~~~~~~~~~~~~~~~~l~~~~ 170 (415)
|++.+++.... +| .+|+....+|++....+...... +..++....+....+++.+++.+
T Consensus 114 A~e~A~klar~~~~~~~~~~r~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~l~~~l 193 (423)
T PRK05964 114 AVEVALKMALQYWRNRGEPGRSRFLSLRGGYHGDTIGTMSVGDRGGMHALYTPLLFEQVTAPFPPDGYEQATLDALEALL 193 (423)
T ss_pred HHHHHHHHHHHHHHhcCCCCCcEEEEEcCCcCCccHHHHhcCCCccccccccCcCCCCEEeCCCcchhHHHHHHHHHHHH
Confidence 99999987631 23 57999999998866544332111 11222211000011277777777
Q ss_pred CC--CceEEEecCC--CCccccCC-CHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCcc
Q 014936 171 DQ--NTVALVIINP--GNPCGNVY-SYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSK 245 (415)
Q Consensus 171 ~~--~~~~v~i~~p--~nptG~~~-~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK 245 (415)
.+ ...+.++..| ++..|... +.+.+++|.++|++||+++|+||++.++...|... ....++.... +.+++|
T Consensus 194 ~~~~~~iaavi~Ep~i~~~gG~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~G~~~-a~~~~~v~pD---i~~~~K 269 (423)
T PRK05964 194 EKHAGEIAAFIVEPLVQGAGGMLFYDPRYLAELRRICDRHGVLLIFDEIATGFGRTGTLF-ACEQAGVSPD---IMCLSK 269 (423)
T ss_pred HhCCCcEEEEEEecccccCCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCcchh-HHHhcCCCCC---eeeeeh
Confidence 42 3344566676 56677764 89999999999999999999999998776555321 1122222222 336789
Q ss_pred ccCCCCceEEEEEeeCCCCCCChHHHHHHHHhh-------ccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHH
Q 014936 246 RWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKY-------FDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDI 318 (415)
Q Consensus 246 ~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~ 318 (415)
+++.+++++|++++++ ++.+.+... ...+++.++++..++.+.|+...+ ++..++++++.++
T Consensus 270 ~l~gG~~p~~av~~~~--------~i~~~~~~~~~~~~~~~~~T~~~np~~~aaa~a~l~~l~~---~~~~~~~~~~g~~ 338 (423)
T PRK05964 270 GLTGGYLPLAATLCTA--------EIFEAFYSDDRAKAFMHSPSYTANPLACAAANASLDLFED---EPVLERVAALSAG 338 (423)
T ss_pred hhhcCcccceEEEEcH--------HHHHhhhcCCcccccccCCCCCcCHHHHHHHHHHHHHHHh---cCHHHHHHHHHHH
Confidence 9765558999988865 677766421 112345788888888888764211 2344555555555
Q ss_pred HHHHhhcCCCCcCCC-CCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEee--CChhhHH
Q 014936 319 CYNKIKEIPCISCPH-KPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFA--VDPYSLE 395 (415)
Q Consensus 319 l~~~l~~~~~~~~~~-~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~--~~~~~l~ 395 (415)
+.+.|+++.....+. ....|.++.+.+..... + .....+...+ .++||.+.+.. +.+|+++. +++++++
T Consensus 339 l~~~l~~l~~~~~i~~vrg~Gl~~~i~l~~~~~-~-~~~~~l~~~l-~~~Gv~v~~~~-----~~lR~~p~l~~t~edId 410 (423)
T PRK05964 339 LAEGLEPFRDLPGVADVRVLGAIGAVELDRPVL-E-RDGPALRAFA-LERGVLLRPLG-----NTIYLMPPYIITAEELD 410 (423)
T ss_pred HHHHHHhhccCCCeEEeecccEEEEEEeccCcc-h-hHHHHHHHHH-HHCCeEEEecC-----CEEEEeCCcccCHHHHH
Confidence 666555442222111 23446666666643110 0 0133454544 56799998742 57999985 7999999
Q ss_pred HHHHHHHHHHHH
Q 014936 396 ECLDRIKSFYQR 407 (415)
Q Consensus 396 ~~l~~l~~~~~~ 407 (415)
.++++|++++++
T Consensus 411 ~~v~~l~~al~~ 422 (423)
T PRK05964 411 RITDAIVEVADE 422 (423)
T ss_pred HHHHHHHHHHhh
Confidence 999999999865
No 254
>TIGR02407 ectoine_ectB diaminobutyrate--2-oxoglutarate aminotransferase. Members of this family of class III pyridoxal-phosphate-dependent aminotransferases are diaminobutyrate--2-oxoglutarate aminotransferase (EC 2.6.1.76) that catalyze the first step in ectoine biosynthesis from L-aspartate beta-semialdehyde. This family is readily separated phylogenetically from enzymes with the same substrate and product but involved in other process such as siderophore or 1,3-diaminopropane biosynthesis. The family TIGR00709 previously included both groups but has now been revised to exclude the ectoine biosynthesis proteins of this family. Ectoine is a compatible solute particularly effective in conferring salt tolerance.
Probab=99.89 E-value=5.2e-20 Score=174.39 Aligned_cols=346 Identities=15% Similarity=0.084 Sum_probs=206.6
Q ss_pred ccCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCC-CCCcEEE-eCCh
Q 014936 32 KNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKL-TPNDVFV-TSGC 109 (415)
Q Consensus 32 ~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~-~~~~i~i-~~g~ 109 (415)
.+|+.++||..|.-.... --.+|.+.+++++++..... .... ....+.+..+++.+.+....+- ..+.+++ +++|
T Consensus 32 ~dG~~ylD~~~g~~~~~l-Gh~~p~v~~ai~~ql~~~~~-~~~~-~~~~~~~~~lae~l~~~~~~~~~~~~~~~f~~~sG 108 (412)
T TIGR02407 32 EDGKEYIDFFAGAGALNY-GHNNPKLKQALIDYLADDGI-IHSL-DMATEAKREFLETFNEIILKPRGLDYKVQFPGPTG 108 (412)
T ss_pred CCCCEEEEcccchhhccC-CCCCHHHHHHHHHHHhhccc-eecc-ccCcHHHHHHHHHHHHhccCccCCCceEEEeCCCc
Confidence 358899999887533221 12579999999998874221 1111 1123455556666543211011 1124655 5899
Q ss_pred HHHHHHHHHHhcC-C-CCEEEEcCCCCcchHHHHHhC-CC------------eEEEeeccCCCCC-CCChhHHHhhcCC-
Q 014936 110 TQAIDVAMALLSR-P-GANILLPRPGFPIYELSAAFR-HI------------EVRHFDLLPDKGW-EVDLDDIESLADQ- 172 (415)
Q Consensus 110 ~~al~~~~~~l~~-~-gd~vi~~~p~y~~~~~~~~~~-g~------------~~~~~~~~~~~~~-~~~~~~l~~~~~~- 172 (415)
++|++.+++.... . ..+|+....+|++....+... |. .+..+|....... .-+++.+++.+++
T Consensus 109 seA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~~~~~ 188 (412)
T TIGR02407 109 TNAVESALKLARKVTGRSNVVSFTNAFHGMTLGSLSVTGNRFKRQGAGVPLSNVSRMPYDGYLGGDVDTIAYFEKLLEDS 188 (412)
T ss_pred hHHHHHHHHHHhhhcCCCeEEEECCCcCCchHHHHHhcCCcccccCCCCCCCCeEECCCCCccccchhHHHHHHHHHHhc
Confidence 9999999988652 2 257999999999876554332 11 1122221100000 0236667777752
Q ss_pred ----CceEEEecCC-CCcccc-CCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcc-cccccCCCCCeEEEccCcc
Q 014936 173 ----NTVALVIINP-GNPCGN-VYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFV-PMGVFGSTVPILTLGSLSK 245 (415)
Q Consensus 173 ----~~~~v~i~~p-~nptG~-~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~-~~~~~~~~~~~i~~~s~sK 245 (415)
...+.++..| +++.|. ..|.+.+++|.++|++||+++|+||++.++...|.... ....+.++ + .+++|
T Consensus 189 ~~~~~~~aavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~~a~~~~~v~PD--i---~~~~K 263 (412)
T TIGR02407 189 SSGVDLPAAVILETVQGEGGINVASDEWLQRLEKLCRRHDILLIVDDIQAGCGRTGTFFSFEPAGIEPD--I---VCLSK 263 (412)
T ss_pred cCCCCceEEEEeccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchhHHhcccCCCCC--E---EEech
Confidence 1234556666 678888 57999999999999999999999999997665554321 11223332 2 35789
Q ss_pred ccCCCCceEEEEEeeCCCCCCChHHHHHHHHhh-ccccCCchhHHHHHHHHhhCC-CcHHHHHHHHHHHHHHHHHHHHHh
Q 014936 246 RWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKY-FDILGDPATFIQAAVPSILQQ-PDEVFFKKTLNLLKQSVDICYNKI 323 (415)
Q Consensus 246 ~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~~~l~~~l 323 (415)
.++..|+|+|++++++ ++ +.+... ...++..++++..++.+.|+. ..+. +..+++++..+++.+.|
T Consensus 264 ~lg~~G~pigav~~~~--------~~-~~~~~~~~~~T~~gnpl~~aaa~a~l~~~i~~~---~l~~~~~~~g~~l~~~l 331 (412)
T TIGR02407 264 SISGYGLPLALTLIKP--------EL-DVWKPGEHNGTFRGNNLAFVTATAALEYYWSDD---AFEKAVQRKSEIIQERL 331 (412)
T ss_pred hccCCccceeEEEEch--------hh-hccCCCccCCCCCccHHHHHHHHHHHHHHhccc---HHHHHHHHHHHHHHHHH
Confidence 9654499999999965 23 333222 223456777766665665542 2211 12223333333333333
Q ss_pred ----hcCCCCcCCCCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEee--CChhhHHHH
Q 014936 324 ----KEIPCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFA--VDPYSLEEC 397 (415)
Q Consensus 324 ----~~~~~~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~--~~~~~l~~~ 397 (415)
+.++++. ...+..|+++|+.++.. .....+...+ .++||.+.+...+ .+.||+++. .++++++.+
T Consensus 332 ~~l~~~~~~~~-~~vrg~Gl~~~l~l~~~-----~~~~~~~~~~-~~~Gv~v~~~~~~--~~~lr~~p~l~~t~~~i~~~ 402 (412)
T TIGR02407 332 DRIVAEYPELI-KQVRGRGLMQGIECGDG-----DLAGKIAKAA-FENGLIIETSGPN--DEVIKLLPPLTIDEETLQQG 402 (412)
T ss_pred HHHHhhCCCce-EeeecceeEEEEEecCh-----HHHHHHHHHH-HHCCCEEeccCCC--CCEEEEECCCCCCHHHHHHH
Confidence 3344333 33567799999999642 1133454544 5679999874322 367999884 789999999
Q ss_pred HHHHHHHHH
Q 014936 398 LDRIKSFYQ 406 (415)
Q Consensus 398 l~~l~~~~~ 406 (415)
+++|.++++
T Consensus 403 ~~~l~~~l~ 411 (412)
T TIGR02407 403 LDILEQAVE 411 (412)
T ss_pred HHHHHHHHh
Confidence 999999875
No 255
>PRK08114 cystathionine beta-lyase; Provisional
Probab=99.89 E-value=4.5e-20 Score=171.36 Aligned_cols=220 Identities=14% Similarity=0.130 Sum_probs=168.7
Q ss_pred CCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHH----HhCCCeEEEee
Q 014936 77 AGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSA----AFRHIEVRHFD 152 (415)
Q Consensus 77 ~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~----~~~g~~~~~~~ 152 (415)
+....|++.||+.- ..+..+++++|++|+.+++.++.++||+|+++...|.+....+ +..|+++..++
T Consensus 62 Pt~~~le~~la~LE--------g~~~a~~~~SGmaAi~~~~~~ll~~GD~Vv~~~~~Yg~t~~l~~~~l~~~Gi~v~~vd 133 (395)
T PRK08114 62 LTHFSLQEAMCELE--------GGAGCALYPCGAAAVANAILAFVEQGDHVLMTGTAYEPTQDFCSKILSKLGVTTTWFD 133 (395)
T ss_pred hhHHHHHHHHHHHh--------CCCeEEEEhHHHHHHHHHHHHHcCCCCEEEEeCCCcHHHHHHHHHHHHhcCcEEEEEC
Confidence 35577888888864 4568888888999999999999999999999999998776554 66899988876
Q ss_pred ccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhc--CcEEEEccccCCcccCCCCcccccc
Q 014936 153 LLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKL--KTLVIADEVYGHLVFGDKPFVPMGV 230 (415)
Q Consensus 153 ~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~--~~~li~De~~~~~~~~~~~~~~~~~ 230 (415)
. .|.+.+++++++++++|++.+|+||+|.+ .++++|+++|+++ |+++++|.+++.... .....
T Consensus 134 ~-------~d~~~l~~~l~~~TrlV~~EtpsNp~~~v---~DI~~Ia~ia~~~g~g~~lvVDnT~a~p~~-----~~pl~ 198 (395)
T PRK08114 134 P-------LIGADIAKLIQPNTKVVFLESPGSITMEV---HDVPAIVAAVRSVNPDAVIMIDNTWAAGVL-----FKALD 198 (395)
T ss_pred C-------CCHHHHHHhcCCCceEEEEECCCCCCCEe---ecHHHHHHHHHHhCCCCEEEEECCCccccc-----cCHHH
Confidence 3 36789999999999999999999999999 5688888888897 499999999976321 12233
Q ss_pred cCCCCCeEEEccCccccCCCC-ceEEEEEeeCCCCCCChHHHHHHHHhh-ccccCCchhHHHHHHHHhhCCCcHHHHHHH
Q 014936 231 FGSTVPILTLGSLSKRWIVPG-WRLGWFVTTDPCGMFRKPKVVERMKKY-FDILGDPATFIQAAVPSILQQPDEVFFKKT 308 (415)
Q Consensus 231 ~~~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~ 308 (415)
++.+ +++.|.+|.++.+| .-.|.++.++ +.++.++.. .......+|.....+..-|+. +.-+
T Consensus 199 ~GaD---ivv~S~tKyl~Ghsdv~~G~v~~~~--------~~~~~l~~~~~~~G~~~~p~~a~l~~rgl~T-----L~lR 262 (395)
T PRK08114 199 FGID---ISIQAGTKYLVGHSDAMIGTAVANA--------RCWEQLRENSYLMGQMVDADTAYMTSRGLRT-----LGVR 262 (395)
T ss_pred cCCc---EEEEcCcccccCCCcceeEEEEcCH--------HHHHHHHHHHHhccCCCCHHHHHHHHcCCCc-----HHHH
Confidence 4444 89999999877665 5566555432 344545433 233456677777777777766 7788
Q ss_pred HHHHHHHHHHHHHHhhcCCCCcCCCCC
Q 014936 309 LNLLKQSVDICYNKIKEIPCISCPHKP 335 (415)
Q Consensus 309 ~~~~~~~~~~l~~~l~~~~~~~~~~~p 335 (415)
.++..++...+.+.|++.|.+..+.+|
T Consensus 263 ~~~~~~na~~va~~L~~hp~V~~V~yP 289 (395)
T PRK08114 263 LRQHEESSLKVAEWLAEHPEVARVNHP 289 (395)
T ss_pred HHHHHHHHHHHHHHHHcCCCEeEEECC
Confidence 899999999999999988776545455
No 256
>TIGR01788 Glu-decarb-GAD glutamate decarboxylase. This model represents the pyridoxal phosphate-dependent glutamate (alpha) decarboxylase found in bacteria (low and hi-GC gram positive, proteobacteria and cyanobacteria), plants, fungi and at least one archaon (Methanosarcina). The product of the enzyme is gamma-aminobutyrate (GABA).
Probab=99.89 E-value=7.5e-20 Score=172.48 Aligned_cols=339 Identities=14% Similarity=0.076 Sum_probs=220.3
Q ss_pred CCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEE--EeCChHHHHHHHHHHhcC-------
Q 014936 52 HTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVF--VTSGCTQAIDVAMALLSR------- 122 (415)
Q Consensus 52 ~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~--i~~g~~~al~~~~~~l~~------- 122 (415)
++.|.+.+.+.+.+..... .+.......++.+.+.+++.+.+|.+-..+++. +|+|+|+++.+++.+...
T Consensus 52 ~~~p~~~~~~~~~l~~~~~-np~s~~~~~~le~~~~~~la~llg~~~~~~~~~g~~TsGgTEAn~~al~~ar~~~~~~~~ 130 (431)
T TIGR01788 52 WMEPEARKLMDETINKNMI-DKDEYPQTAEIENRCVNMLADLWHAPAKDAEAVGTSTIGSSEAIMLGGLAMKWRWRKRME 130 (431)
T ss_pred CCCHHHHHHHHHHHhcCCC-CcccCccHHHHHHHHHHHHHHHhCCCCCCCCCeEEEechHHHHHHHHHHHHHHHHHHHHH
Confidence 4567788988888764322 222223345788888888887777431113454 489999999998866431
Q ss_pred -CC-----CEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHH
Q 014936 123 -PG-----ANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQ 196 (415)
Q Consensus 123 -~g-----d~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~ 196 (415)
.| ..|+++.-.|+++...++..|+++..+++++ +++.+|+++|++++++++.+|+++..+|.||.+ ++++
T Consensus 131 ~~g~~~~~~~ii~s~~~H~sv~ka~~~lg~~v~~i~~d~-~~~~vd~~~L~~~i~~~t~lV~~t~g~t~tG~i---dpi~ 206 (431)
T TIGR01788 131 AAGKPTDKPNLVMGSNVQVCWEKFARYFDVELREVPMDP-GRYVIDPEQVVEAVDENTIGVVCILGTTYTGEY---EDVK 206 (431)
T ss_pred hcCCCCCCcEEEEcCcchHHHHHHHHHcCceeEEEecCC-CceeeCHHHHHHHHhhCCeEEEEEeCCCCCccc---CCHH
Confidence 12 3799999999999999999999999999865 345689999999999999999999999999999 6788
Q ss_pred HHHHHHhhc------CcEEEEccccCCccc---CCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCC
Q 014936 197 KLAETANKL------KTLVIADEVYGHLVF---GDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFR 267 (415)
Q Consensus 197 ~i~~~~~~~------~~~li~De~~~~~~~---~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~ 267 (415)
+|+++|+++ |+++++|.+|+++.. .+.....+..... .-+..|.+|++ .....+|+++.++...
T Consensus 207 ~I~~i~~~~~~~~~~~~~~HvDaaq~g~~~p~~~~~~~~~~~~~~~---DSis~s~HK~~-~~P~g~G~l~~r~~~~--- 279 (431)
T TIGR01788 207 ALNDALDEYNAKTGWDIPIHVDAASGGFIAPFVYPDLEWDFRLPRV---KSINVSGHKYG-LVYPGVGWVIWRDEEA--- 279 (431)
T ss_pred HHHHHHHHHHhhhCCCceEEEecccHHHHHHHhCCCchhhcCCCCc---eEEEECchhcc-CCCCCcEEEEEeChHH---
Confidence 888888899 999999999996442 1222222221111 14555889974 3333489998876321
Q ss_pred hHHHHHHHHh---hc-----cccCCchhHH--HHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCC-C
Q 014936 268 KPKVVERMKK---YF-----DILGDPATFI--QAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKP-E 336 (415)
Q Consensus 268 ~~~~~~~~~~---~~-----~~~~~~~~~~--~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p-~ 336 (415)
+.+.+.. +. ..+...+... .......|.......+++..++..++.+++.+.|+++|+++++ .| .
T Consensus 280 ---l~~~~~~~~~yl~~~~~~~t~~~sR~g~~al~~w~~l~~lG~~G~~~i~~~~~~la~~l~~~L~~~~~~el~-~~~~ 355 (431)
T TIGR01788 280 ---LPEELIFHVNYLGGDEPTFTLNFSRPANQVIAQYYNFLRLGREGYRKIMQNSLDVARYLAEEIAKLGPFEII-SDGS 355 (431)
T ss_pred ---cchhheecccccCCCCCCcceecCchHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEe-eCCC
Confidence 1122211 00 0011111111 1112222333345778899999999999999999999888855 43 2
Q ss_pred CceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCC---CCCeEEEEe--eCChhhHHHHHHHHHHHHHHH
Q 014936 337 GSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVG---LKNWLRVTF--AVDPYSLEECLDRIKSFYQRH 408 (415)
Q Consensus 337 ~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~---~~~~iRi~~--~~~~~~l~~~l~~l~~~~~~~ 408 (415)
....+.++++.....+ .+..++...| .+.|+.+....... ...++|+++ ..+.+.++.+++.|++++.++
T Consensus 356 ~~~iV~Fr~~~~~~~~-~~~~~l~~~L-~~~G~~~~~~~~p~~~~~~~~lR~~~~~~~~~~~~~~~~~~~~~~~~~~ 430 (431)
T TIGR01788 356 GIPLVAFKLKDDADPG-YTLYDLSHRL-RERGWIVPAYTLPKNAEDIVVMRIVVREGFSRDLAELLIEDIEAALAYL 430 (431)
T ss_pred CceEEEEEeCCCCCCC-cCHHHHHHHH-HHCCCcccCCCCCCccCCeEEEEEEecCCCCHHHHHHHHHHHHHHHHhh
Confidence 3334445554211001 1344555554 67798753322211 124689998 357889999999999887653
No 257
>KOG1360 consensus 5-aminolevulinate synthase [Coenzyme transport and metabolism]
Probab=99.88 E-value=1.9e-20 Score=164.27 Aligned_cols=335 Identities=16% Similarity=0.138 Sum_probs=244.8
Q ss_pred CcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCC------CCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeC
Q 014936 34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKF------NGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTS 107 (415)
Q Consensus 34 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~------~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~ 107 (415)
.+++--+.+++ +.+...+|.+.+|+.+.++.... +--+...-..+|++.+|+.. ..+..++.+
T Consensus 170 ~k~VtVWCSND---YLgms~Hp~V~~A~~~tl~~hG~GAGGTRNIsG~s~~hv~LE~eLA~LH--------qK~aALlFs 238 (570)
T KOG1360|consen 170 EKKVTVWCSND---YLGMSRHPEVLDAMHDTLDRHGAGAGGTRNISGHSKHHVRLEAELADLH--------QKEAALLFS 238 (570)
T ss_pred cCceEEEecCc---cccccCChHHHHHHHHHHHHcCCCcCCccccCCCCchhhhHHHHHHHHh--------cCcceeeee
Confidence 45566666666 55677899999999999885211 11123344578999999988 566677777
Q ss_pred ChHHHHHHHHHHhc--CCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCC----CceEEEecC
Q 014936 108 GCTQAIDVAMALLS--RPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ----NTVALVIIN 181 (415)
Q Consensus 108 g~~~al~~~~~~l~--~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~----~~~~v~i~~ 181 (415)
++.-|++..+..|. -||..|..+.-.|.+.....+..++.-..+.+ -|+++|++++.. .+|+|.+..
T Consensus 239 SCfVANDstLftLak~lpgcei~SD~gNHASMI~GIrns~v~K~IFrH-------ND~~hL~~lL~~~~~svPKivAFEt 311 (570)
T KOG1360|consen 239 SCFVANDSTLFTLAKKLPGCEIFSDEGNHASMIQGIRNSRVPKHIFRH-------NDLDHLEQLLQSSPKSVPKIVAFET 311 (570)
T ss_pred eeeeccchHHHHHHHHCCCcEEeccccchHHHHHHhhhcCCcceeecc-------CCHHHHHHHHHhCCCCCCceEEEee
Confidence 77777777777765 37899999999999999999998888666655 267787777643 467888888
Q ss_pred CCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCC-CCeEEEccCccccCCCCceEEEEEee
Q 014936 182 PGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGST-VPILTLGSLSKRWIVPGWRLGWFVTT 260 (415)
Q Consensus 182 p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~-~~~i~~~s~sK~~~~~G~r~G~~~~~ 260 (415)
.+..+|.+ .++++|++++++||.+.++||+|+-+.|+..+..--..-+.- .-.|+.+++.|+||+-| ||+.+.
T Consensus 312 VhSM~Gav---cpleelcDvah~yGAiTFlDEVHAVGlYG~rGaGvgerdGvm~kvDiIsGTLgKafGcVG---GYIAat 385 (570)
T KOG1360|consen 312 VHSMDGAV---CPLEELCDVAHKYGAITFLDEVHAVGLYGPRGAGVGERDGVMHKVDIISGTLGKAFGCVG---GYIAAT 385 (570)
T ss_pred eeccCCCc---CCHHHHHHHHHHhCceeeeehhhhhccccCCCCCccccCCcchhhhhcccchhhhccccc---ceehhh
Confidence 99999999 668999999999999999999999988875543321111111 11388899999999998 999886
Q ss_pred CCCCCCChHHHHHHHHhhcc---ccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCC
Q 014936 261 DPCGMFRKPKVVERMKKYFD---ILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEG 337 (415)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~ 337 (415)
. .+++.++.+.. ++.+.+|....-+.++.+...-+.-...++..+++..++++.|.++ |+. + .|..
T Consensus 386 ~--------~LvDmiRSyAaGFIFTTSLPP~vl~GAleaVr~lk~~eg~~lR~~hqrnv~~~kq~l~~~-GiP-V-i~~p 454 (570)
T KOG1360|consen 386 R--------KLVDMIRSYAAGFIFTTSLPPMVLAGALEAVRILKSEEGRVLRRQHQRNVKYVKQLLMEL-GIP-V-IPNP 454 (570)
T ss_pred h--------hHHHHHHHhcCceEEecCCChHHHHhHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHc-CCc-c-cCCC
Confidence 5 68888887732 3344455555444444433222334567788889999999999998 887 4 5666
Q ss_pred ceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCC---CCeEEEEe--eCChhhHHHHHHHHHHHHHHH
Q 014936 338 SMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGL---KNWLRVTF--AVDPYSLEECLDRIKSFYQRH 408 (415)
Q Consensus 338 g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~---~~~iRi~~--~~~~~~l~~~l~~l~~~~~~~ 408 (415)
+.++-+++... ....+....|+.++||++-.-.++.. ...+||+. .++.+.++.+++.+..++.++
T Consensus 455 SHIiPv~vgda-----~l~~~~sd~Li~~h~iYvQaINyPTV~rG~E~LRiaPTP~HT~~mm~~lv~~l~~vw~~v 525 (570)
T KOG1360|consen 455 SHIIPVRVGDA-----ALAKQASDILISKHNIYVQAINYPTVARGTERLRIAPTPHHTPQMMNILVNALLDVWNEV 525 (570)
T ss_pred cceeeeeccCH-----HHHHHHHHHHHHhcCeEEEeccCCcccccceeeecCCCCCCCHHHHHHHHHHHHHHHHHc
Confidence 66777776542 23567888899999999977665554 45789988 478899999999999988764
No 258
>KOG1412 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT2/GOT1 [Amino acid transport and metabolism]
Probab=99.88 E-value=3.6e-20 Score=157.56 Aligned_cols=364 Identities=15% Similarity=0.172 Sum_probs=245.6
Q ss_pred hHHHHHHHhhhcccccccCcceeEecccCCCCCCC-CCCcHHHHHHHHHHHhcCC-CCCCCCCCCcHHHHHHHHHHHhhh
Q 014936 16 TIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSC-FHTTHVATEAVAEALLSEK-FNGYAPTAGLPLTRRAIAEYLSRD 93 (415)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~-~~~~~~~~~a~~~~~~~~~-~~~y~~~~g~~~lr~~ia~~~~~~ 93 (415)
.+-.+...+.++. +...+||+.|.-....+ ....|.++++-.....+.. -+.|-|.-|.+.+++..++.+-..
T Consensus 16 ~vf~~~~~y~~d~-----~p~KvnL~igAYRtd~g~PWvLPvVk~~e~~i~~d~s~NHEYLpi~Gl~~F~~~A~el~lg~ 90 (410)
T KOG1412|consen 16 EVFKLNASYGEDL-----DPVKVNLGIGAYRTDDGKPWVLPVVKKAEKKIANDQSLNHEYLPILGLPTFTKAATELLLGA 90 (410)
T ss_pred HHHhhHHHhcccC-----CcceeecccceEEcCCCCeeEehhhhhhhhhccCchhccchhccccCchhhhhhhHHHhcCC
Confidence 3444444444444 45668998886332222 1244666665544443322 257888899999999999988432
Q ss_pred CCCCCCCCcEE--EeCChHHHHHHHHHHhc--CCCCEEEEcCCCCcchHHHHHhCC-CeEEEeeccCCCCCCCChhHHHh
Q 014936 94 LPYKLTPNDVF--VTSGCTQAIDVAMALLS--RPGANILLPRPGFPIYELSAAFRH-IEVRHFDLLPDKGWEVDLDDIES 168 (415)
Q Consensus 94 ~~~~~~~~~i~--i~~g~~~al~~~~~~l~--~~gd~vi~~~p~y~~~~~~~~~~g-~~~~~~~~~~~~~~~~~~~~l~~ 168 (415)
..-.+..++++ =+-|||.|+.++...+. -....|.+.+|+|..+...+...| .++..++.-....-.+|++.+..
T Consensus 91 ~s~a~kE~Rv~~vQslsGTGAl~~~A~Fl~~~~~~~~VY~SnPTW~nH~~if~~aGf~tv~~Y~yWd~~~k~~d~e~~Ls 170 (410)
T KOG1412|consen 91 DSPAIKEDRVFGVQSLSGTGALRIAADFLATFYNKNTVYVSNPTWENHHAIFEKAGFTTVATYPYWDAENKCVDLEGFLS 170 (410)
T ss_pred CchhhhhccccceeeccccchhhhhHHHHHHhcccceeEecCCchhHHHHHHHHcCCceeeeeeeecCCCceecHHHHHH
Confidence 22234556653 45567888887776653 234579999999999999999999 55777776555556789998888
Q ss_pred hcCCCc--eEEEecCC-CCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCC--cccccccCCC-CCeEEEcc
Q 014936 169 LADQNT--VALVIINP-GNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKP--FVPMGVFGST-VPILTLGS 242 (415)
Q Consensus 169 ~~~~~~--~~v~i~~p-~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~--~~~~~~~~~~-~~~i~~~s 242 (415)
.++..+ ..+++..+ +||||+-.+.|++++|++..++++.+.+.|-+|.++.-++.. ...+..+... ..++++.|
T Consensus 171 dl~~APe~si~iLhaCAhNPTGmDPT~EQW~qia~vik~k~lf~fFDiAYQGfASGD~~~DawAiR~fV~~g~e~fv~QS 250 (410)
T KOG1412|consen 171 DLESAPEGSIIILHACAHNPTGMDPTREQWKQIADVIKSKNLFPFFDIAYQGFASGDLDADAWAIRYFVEQGFELFVCQS 250 (410)
T ss_pred HHhhCCCCcEEeeeccccCCCCCCCCHHHHHHHHHHHHhcCceeeeehhhcccccCCccccHHHHHHHHhcCCeEEEEhh
Confidence 776433 34455555 999999999999999999999999999999999998755322 1122222221 34799999
Q ss_pred CccccCCCCceEEEEEeeCCCCCCChHHHHHHH----Hhh-ccccCCchhHHHHHHHHhhCCCc--HHH---HHHHHHHH
Q 014936 243 LSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERM----KKY-FDILGDPATFIQAAVPSILQQPD--EVF---FKKTLNLL 312 (415)
Q Consensus 243 ~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~----~~~-~~~~~~~~~~~~~a~~~~l~~~~--~~~---~~~~~~~~ 312 (415)
|+|.||+.+-|+|-+..-- +++..+..+ ... ....+.++..+...+.+.|+... ++| ++.+..++
T Consensus 251 FaKNfGlYneRvGnltvv~-----~n~a~i~~v~SQl~lviR~~~SNPPAyGArIV~kvL~tP~lre~W~~sik~MssRI 325 (410)
T KOG1412|consen 251 FAKNFGLYNERVGNLTVVV-----NNPAVIAGVKSQLTLVIRSNWSNPPAYGARIVHKVLSTPELREQWIQSIKTMSSRI 325 (410)
T ss_pred hhhhcccccccccceEEEe-----cChhHHHHHHHHHHHHHhhccCCCcchhhHHHHHHhcCHHHHHHHHHHHHHHHHHH
Confidence 9999999999999875421 123333333 222 22346778888899999998754 222 23333455
Q ss_pred HHHHHHHHHHhhcC--CC-CcCCCCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEe-e
Q 014936 313 KQSVDICYNKIKEI--PC-ISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTF-A 388 (415)
Q Consensus 313 ~~~~~~l~~~l~~~--~~-~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~-~ 388 (415)
++.|..++..|..+ || +. -+..+.|+|.+..+. . ..+..|.+++.|.+.+.. ||++ +
T Consensus 326 ~~MR~aLrd~L~aL~TPGtWD-HI~~QiGMFSyTGLt---------p-~qV~~li~~h~vyLl~~G--------RInisG 386 (410)
T KOG1412|consen 326 KKMRTALRDHLVALKTPGTWD-HITQQIGMFSYTGLT---------P-AQVDHLIENHKVYLLSDG--------RINISG 386 (410)
T ss_pred HHHHHHHHHHHHhcCCCCcHH-HHHhhccceeecCCC---------H-HHHHHHHHhceEEEecCC--------cEeeec
Confidence 55666666666654 33 33 224567899887663 3 346778888999987644 9999 5
Q ss_pred CChhhHHHHHHHHHHHHHHH
Q 014936 389 VDPYSLEECLDRIKSFYQRH 408 (415)
Q Consensus 389 ~~~~~l~~~l~~l~~~~~~~ 408 (415)
.....++...++|.++++..
T Consensus 387 LN~~NveyVAkAIde~Vr~~ 406 (410)
T KOG1412|consen 387 LNMKNVEYVAKAIDETVRAI 406 (410)
T ss_pred cccccHHHHHHHHHHHHHhh
Confidence 78889999999998888653
No 259
>PRK15407 lipopolysaccharide biosynthesis protein RfbH; Provisional
Probab=99.88 E-value=4.1e-19 Score=168.76 Aligned_cols=329 Identities=14% Similarity=0.155 Sum_probs=207.4
Q ss_pred cceeEecccCCCCCCCCC-CcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHH
Q 014936 35 KKVISLAMGDPTVHSCFH-TTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAI 113 (415)
Q Consensus 35 ~~~i~l~~g~~~~~~~~~-~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al 113 (415)
.....|+.|.|.+....+ ..+.-.+++.+.+..... .+++ ...++++++|+++ ..+++++++|+++++
T Consensus 23 ~~~~~~~~~~~~ip~~~~~~~~~~~~a~~~~~~~~~~-~~G~--~~~~fe~~lA~~~--------g~~~~v~~~sGt~al 91 (438)
T PRK15407 23 HAPKPFVPGKSPIPPSGKVIDAKELQNLVDASLDFWL-TTGR--FNDAFEKKLAEFL--------GVRYALLVNSGSSAN 91 (438)
T ss_pred cccccccCCCCCCCcCccCCCHHHHHHHHHHHHhCcc-cCCh--hHHHHHHHHHHHh--------CCCeEEEECCHHHHH
Confidence 344557888875432211 223333444454443322 3333 2579999999998 335799999999999
Q ss_pred HHHHHHh---------cCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCC
Q 014936 114 DVAMALL---------SRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGN 184 (415)
Q Consensus 114 ~~~~~~l---------~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~n 184 (415)
.+++.++ .++||+|+++.++|..+...+...|++++.+++++ .++.+|++.+++.+++++++|+++++
T Consensus 92 ~~aL~al~~~~~~~~~~~pGd~VIv~~~t~~a~~~~v~~~G~~pv~vdvd~-~~~~id~~~le~~i~~~tkaVi~~~~-- 168 (438)
T PRK15407 92 LLAFSALTSPKLGDRALKPGDEVITVAAGFPTTVNPIIQNGLVPVFVDVEL-PTYNIDASLLEAAVSPKTKAIMIAHT-- 168 (438)
T ss_pred HHHHHHHhhccccccCCCCCCEEEECCCCcHHHHHHHHHcCCEEEEEecCC-CcCCcCHHHHHHHcCcCCeEEEEeCC--
Confidence 9999876 37899999999999999999999999999998864 35779999999999889999999875
Q ss_pred ccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcc-cCCCCcccccccCCCCCeEEEccCc--cccCCCCceEEEEEeeC
Q 014936 185 PCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLV-FGDKPFVPMGVFGSTVPILTLGSLS--KRWIVPGWRLGWFVTTD 261 (415)
Q Consensus 185 ptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~-~~~~~~~~~~~~~~~~~~i~~~s~s--K~~~~~G~r~G~~~~~~ 261 (415)
+|.. .++++|.++|+++|+++|+|++|+.+. +.|.. +.+++. +.++||+ |.+.. | ..|++++++
T Consensus 169 -~G~p---~dl~~I~~la~~~gi~vIeDaa~a~G~~~~g~~---~G~~gd----~~~fSf~~~k~~~~-g-eGG~l~t~d 235 (438)
T PRK15407 169 -LGNP---FDLAAVKAFCDKHNLWLIEDNCDALGSTYDGRM---TGTFGD----IATLSFYPAHHITM-G-EGGAVFTND 235 (438)
T ss_pred -CCCh---hhHHHHHHHHHHCCCEEEEECccchhhhcCCee---eeccCc----eEEEeCCCCCCccc-c-CceEEEECC
Confidence 4443 578999999999999999999999865 33332 333332 4555665 55433 2 248888865
Q ss_pred CCCCCChHHHHHHHHhhcccc----------------------------------------CCchhHHHHHHHHhhCCCc
Q 014936 262 PCGMFRKPKVVERMKKYFDIL----------------------------------------GDPATFIQAAVPSILQQPD 301 (415)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~----------------------------------------~~~~~~~~~a~~~~l~~~~ 301 (415)
+ ++.+.++....+. ...+.+..+.+..-|
T Consensus 236 ~-------~l~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~n~rmsel~AAig~~qL---- 304 (438)
T PRK15407 236 P-------LLKKIIESFRDWGRDCWCAPGCDNTCGKRFGWQLGELPFGYDHKYTYSHLGYNLKITDMQAAIGLAQL---- 304 (438)
T ss_pred H-------HHHHHHHHHHHhCcccccccccccccccccccccccccccccccccccccccccCccHHHHHHHHHHH----
Confidence 3 4555544332211 011111112222222
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCC-CcCCCCCCCc---e-EEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCC
Q 014936 302 EVFFKKTLNLLKQSVDICYNKIKEIPC-ISCPHKPEGS---M-AVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTA 376 (415)
Q Consensus 302 ~~~~~~~~~~~~~~~~~l~~~l~~~~~-~~~~~~p~~g---~-~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~ 376 (415)
+.+++..++-+++.+++.+.|..+++ +.....+.+. + .+.+.++... + .+..++...| +++||.+.+...
T Consensus 305 -~~l~~~~~~R~~~a~~y~~~L~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~--~-~~Rd~l~~~L-~~~GI~~~~~~~ 379 (438)
T PRK15407 305 -EKLPGFIEARKANFAYLKEGLASLEDFLILPEATPNSDPSWFGFPITVKEDA--G-FTRVELVKYL-EENKIGTRLLFA 379 (438)
T ss_pred -HHHHHHHHHHHHHHHHHHHHhccCCCccccCcCCCCCeeEEEEEEEEECCcC--C-CCHHHHHHHH-HHCCCCccccCC
Confidence 44677777778888888888887764 3211122222 2 2223343210 1 1345666655 667997653221
Q ss_pred --------CC------C----------CCeEEEEe--eCChhhHHHHHHHHHHHHH
Q 014936 377 --------VG------L----------KNWLRVTF--AVDPYSLEECLDRIKSFYQ 406 (415)
Q Consensus 377 --------~~------~----------~~~iRi~~--~~~~~~l~~~l~~l~~~~~ 406 (415)
|. . ...+-+-+ ..++++++..++.|+++++
T Consensus 380 ~~~~~~p~~~~~~~~~~~~~P~ae~~~~~~l~LP~~~~l~~~~v~~i~~~i~~~~~ 435 (438)
T PRK15407 380 GNLTRQPYFKGVKYRVVGELTNTDRIMNDTFWIGVYPGLTEEMLDYVIEKIEEFFG 435 (438)
T ss_pred CccccChhhhhcCCCCCCCChHHHHHHhCeEEecCCCCCCHHHHHHHHHHHHHHHh
Confidence 00 0 11233333 3578999999999988774
No 260
>PF01053 Cys_Met_Meta_PP: Cys/Met metabolism PLP-dependent enzyme; InterPro: IPR000277 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent enzymes involved in the metabolism of cysteine, homocysteine and methionine have been shown [, ] to be evolutionary related. These enzymes are proteins of about 400 amino-acid residues. The pyridoxal-P group is attached to a lysine residue located in the central section of these enzymes.; GO: 0030170 pyridoxal phosphate binding, 0006520 cellular amino acid metabolic process; PDB: 1PFF_A 2NMP_A 3ELP_B 3COG_C 1CS1_A 1E5E_B 3RI6_A 1E5F_A 2FQ6_B 1CL2_B ....
Probab=99.88 E-value=9.9e-20 Score=168.75 Aligned_cols=282 Identities=16% Similarity=0.194 Sum_probs=191.7
Q ss_pred CcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHH----hCCCeEEEeec
Q 014936 78 GLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAA----FRHIEVRHFDL 153 (415)
Q Consensus 78 g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~----~~g~~~~~~~~ 153 (415)
....+++.||+.- ..+..+++++|++|+..++.+++++||+|+++...|.+....++ ..|+++..++.
T Consensus 56 t~~~le~~la~Le--------~g~~a~~~~SGmaAi~~~l~~ll~~Gd~iv~~~~~Y~~t~~~~~~~l~~~gv~v~~~d~ 127 (386)
T PF01053_consen 56 TVRALEQRLAALE--------GGEDALLFSSGMAAISAALLALLKPGDHIVASDDLYGGTYRLLEELLPRFGVEVTFVDP 127 (386)
T ss_dssp HHHHHHHHHHHHH--------T-SEEEEESSHHHHHHHHHHHHS-TTBEEEEESSSSHHHHHHHHHCHHHTTSEEEEEST
T ss_pred cHHHHHHHHHHhh--------cccceeeccchHHHHHHHHHhhcccCCceEecCCccCcchhhhhhhhcccCcEEEEeCc
Confidence 4567777777775 34789999999999999999999999999999999998776654 46899888753
Q ss_pred cCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcC-cEEEEccccCCcccCCCCcccccccC
Q 014936 154 LPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLK-TLVIADEVYGHLVFGDKPFVPMGVFG 232 (415)
Q Consensus 154 ~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~-~~li~De~~~~~~~~~~~~~~~~~~~ 232 (415)
-|++++++++++++++|++-.|.||+..+ .++++|+++|+++| +++++|+.++.... ..++ .++
T Consensus 128 -------~d~~~l~~~l~~~t~~v~~EspsNP~l~v---~Dl~~i~~~a~~~g~~~~vVDnT~atp~~----~~pL-~~G 192 (386)
T PF01053_consen 128 -------TDLEALEAALRPNTKLVFLESPSNPTLEV---PDLEAIAKLAKEHGDILVVVDNTFATPYN----QNPL-ELG 192 (386)
T ss_dssp -------TSHHHHHHHHCTTEEEEEEESSBTTTTB------HHHHHHHHHHTTT-EEEEECTTTHTTT----C-GG-GGT
T ss_pred -------hhHHHHHhhccccceEEEEEcCCCccccc---ccHHHHHHHHHHhCCceEEeeccccceee----eccC-cCC
Confidence 37999999999999999999999999877 67899999999998 99999999876321 1122 233
Q ss_pred CCCCeEEEccCccccCCCCceE-EEEEeeCCCCCCChHHHHHHHHhhc-cccCCchhHHHHHHHHhhCCCcHHHHHHHHH
Q 014936 233 STVPILTLGSLSKRWIVPGWRL-GWFVTTDPCGMFRKPKVVERMKKYF-DILGDPATFIQAAVPSILQQPDEVFFKKTLN 310 (415)
Q Consensus 233 ~~~~~i~~~s~sK~~~~~G~r~-G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~ 310 (415)
.+ |++.|++|.++..|--+ |.+++++ ..++.+.++... ......++.....+..-|+. +.-+.+
T Consensus 193 aD---ivv~S~TKyl~Ghsdv~~G~vv~~~------~~~~~~~l~~~~~~~G~~~~p~da~ll~rgl~T-----l~~R~~ 258 (386)
T PF01053_consen 193 AD---IVVHSATKYLSGHSDVMGGAVVVNG------SSELYDRLREFRRLLGATLSPFDAWLLLRGLRT-----LPLRME 258 (386)
T ss_dssp -S---EEEEETTTTTTTSSSE-EEEEEESS------HHHHHHHHHHHHHHHT-B--HHHHHHHHHHHTT-----HHHHHH
T ss_pred ce---EEEeeccccccCCcceeeEEEEECc------hhhhhhhhcchhhhcCccchHHHHHHHhcCCCc-----HHHHHH
Confidence 33 88999999977655554 4455433 125666666553 34456677777777777876 788889
Q ss_pred HHHHHHHHHHHHhhcCCCCcCCCCC----------------CCceEEEEecCccccCCCCCHHHHHHHHHhhcCeE---E
Q 014936 311 LLKQSVDICYNKIKEIPCISCPHKP----------------EGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVI---I 371 (415)
Q Consensus 311 ~~~~~~~~l~~~l~~~~~~~~~~~p----------------~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~---v 371 (415)
+..+++..+.+.|++.|.+.-+.+| ..|..+.++++. ..+.+..++..-++. .
T Consensus 259 ~~~~nA~~lA~~L~~hp~V~~V~yPgl~s~p~~~~~~~~~~g~ggl~sf~l~~--------~~~~~~~f~~~l~l~~~~~ 330 (386)
T PF01053_consen 259 RQNENAEALAEFLEEHPKVKRVYYPGLPSHPQHELAKRQMSGGGGLLSFELKG--------GEEAARRFLDALKLFSIAP 330 (386)
T ss_dssp HHHHHHHHHHHHHHTSTTEEEEEETTSTTSTTHHHHHHHCSSCTSEEEEEESS--------HHHHHHHHHHH-SSSEESS
T ss_pred HHHHHHHHHHHHHHhCCCCCeEEEcccccccceeeeeecccccCceeEEEecc--------chhhhHhHHhhhhhHhhhh
Confidence 9999999999999988776645555 233466667753 223334444443433 1
Q ss_pred EcCCCCC----------------------C-CCeEEEEeeCChhhHHHHHHHHHHHHH
Q 014936 372 LPGTAVG----------------------L-KNWLRVTFAVDPYSLEECLDRIKSFYQ 406 (415)
Q Consensus 372 ~~g~~~~----------------------~-~~~iRi~~~~~~~~l~~~l~~l~~~~~ 406 (415)
+-|.... . ++.||+|++.. +.+.+++.|+++++
T Consensus 331 SlGg~~SLi~~p~~~~h~~~~~e~~~~~Gi~~~liRlSvGlE--d~~dLi~Dl~~AL~ 386 (386)
T PF01053_consen 331 SLGGVESLISHPASTSHRSLSPEERAEAGISDGLIRLSVGLE--DPDDLIADLEQALE 386 (386)
T ss_dssp S-SSSS-EEEETTCTTTTTSCHHHHHHTTS-TTEEEEE--SS---HHHHHHHHHHHHH
T ss_pred hcCCcccccccccchhhccCChhhhhccCCCCCeeEEEeccC--CHHHHHHHHHHhcC
Confidence 2222111 0 46799999873 56667777776653
No 261
>PRK03715 argD acetylornithine transaminase protein; Provisional
Probab=99.88 E-value=1e-19 Score=171.18 Aligned_cols=339 Identities=16% Similarity=0.095 Sum_probs=215.2
Q ss_pred cCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHH
Q 014936 33 NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQA 112 (415)
Q Consensus 33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~a 112 (415)
+++.++||..|.-....+. .+|.+.+++.+++..... .+ .....+.+..+|+++.+.. ..+.++++++|++|
T Consensus 34 dG~~~lD~~sg~~~~~lGh-~~p~v~~a~~~q~~~~~~-~~--~~~~~~~~~~la~~l~~~~----~~~~v~f~~SGseA 105 (395)
T PRK03715 34 NGKRYLDFIQGWAVNCLGH-CNPGMVEALAAQAEKLIN-PS--PAFYNEPMAKLAGLLTQHS----CFDKVFFANSGAEA 105 (395)
T ss_pred CCCEEEECCcChhhccCCC-CCHHHHHHHHHHHHhccc-cc--ccccCHHHHHHHHHHhhcc----CCCEEEEeCCcHHH
Confidence 5889999987643222222 369999999998875322 12 1234577888899886521 24689999999999
Q ss_pred HHHHHHHhc------CCC-CEEEEcCCCCcchHHHHHh-CCCeEE---EeeccCC--CCCCCChhHHHhhcCCCceEEEe
Q 014936 113 IDVAMALLS------RPG-ANILLPRPGFPIYELSAAF-RHIEVR---HFDLLPD--KGWEVDLDDIESLADQNTVALVI 179 (415)
Q Consensus 113 l~~~~~~l~------~~g-d~vi~~~p~y~~~~~~~~~-~g~~~~---~~~~~~~--~~~~~~~~~l~~~~~~~~~~v~i 179 (415)
++.+++.+. ++| .+|+..+.+|++....+.. .|.... ..|..+. .....|++.+++.+.+++.++++
T Consensus 106 ~e~Aik~ar~~~~~~~~~r~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~aavi~ 185 (395)
T PRK03715 106 NEGAIKLARKWGRKHKNGAYEIITFDHSFHGRTLATMSASGKPGWDTIFAPQVPGFPKAELNDIASVEKLITDKTVAVML 185 (395)
T ss_pred HHHHHHHHHHHhhccCCCCcEEEEECCCcCCChHHHHhhcCCcccccCCCCCCCCceeeCCchHHHHHHHcCCCceEEEE
Confidence 999999875 123 5788888888876544332 232211 1111100 00013788999888766665555
Q ss_pred cCCCCccccC-CCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEE
Q 014936 180 INPGNPCGNV-YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFV 258 (415)
Q Consensus 180 ~~p~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~ 258 (415)
...++..|.. .|.+.+++|.++|++||+++|+||++.++...|.... ...++.... +.+++|.++ .|+++|.++
T Consensus 186 Epv~~~gG~~~~~~~~l~~l~~l~~~~~~llI~DEv~tG~GRtG~~~a-~~~~gv~PD---i~t~gK~lg-~G~p~~av~ 260 (395)
T PRK03715 186 EPVQGEGGVIPATREFMQQLRALTKQHGLLLIVDEVQTGCGRTGTLFA-YELSGIEPD---IMTLGKGIG-GGVPLAALL 260 (395)
T ss_pred eCCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCcchhh-HhhcCCCCc---eeeehhhhh-CCcceEEEE
Confidence 5446667776 4689999999999999999999999998655554321 112222222 347799965 579999998
Q ss_pred eeCCCCCCChHHHHHHHHhhccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcC---CCCcCCCCC
Q 014936 259 TTDPCGMFRKPKVVERMKKYFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEI---PCISCPHKP 335 (415)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~---~~~~~~~~p 335 (415)
+++ ++..........++..++++.+++.+.|+... -++..++++++.+++.+.|+++ .++. . ..
T Consensus 261 ~~~--------~i~~~~~~~~~~T~~g~pl~~aaala~L~~l~---~~~l~~~~~~~g~~l~~~L~~l~~~~~i~-~-vr 327 (395)
T PRK03715 261 AKA--------EVAVFEAGDQGGTYNGNPLMTAVGVAVISQLL---APGFLEGVRARGEYLKEKLLELSEERGLE-G-ER 327 (395)
T ss_pred Ecc--------ccccccCCCcCCCCCCCHHHHHHHHHHHHHHH---hccHHHHHHHHHHHHHHHHHHHhhcCCcC-e-EE
Confidence 865 33311111122345667888888888876432 1345566666667777766643 1233 1 23
Q ss_pred CCceEEEEecCccccCCCCCHHHHHHHHHhhc---CeEEEcCCCCCCCCeEEEEee--CChhhHHHHHHHHHHHHHHH
Q 014936 336 EGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEE---SVIILPGTAVGLKNWLRVTFA--VDPYSLEECLDRIKSFYQRH 408 (415)
Q Consensus 336 ~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~---gi~v~~g~~~~~~~~iRi~~~--~~~~~l~~~l~~l~~~~~~~ 408 (415)
..|+++-+.+... .... +...+.+. ||.+.+.. .+.+|+++. .+++++++++++|.++++++
T Consensus 328 G~Glm~~i~l~~~------~~~~-~~~~~~~~~~~Gi~~~~~~----~~~lR~~p~l~~t~~ei~~~~~~l~~~l~~~ 394 (395)
T PRK03715 328 GEGLLRALLLGKD------IGPQ-IVEKARDMQPDGLLLNAPR----PNLLRFMPALNVTTEEIDQMIAMLRSVLDKL 394 (395)
T ss_pred cceeEEEEEecCc------hHHH-HHHHHHhccCCCEEEeecC----CCEEEEeCCcccCHHHHHHHHHHHHHHHHhh
Confidence 4577777776431 1222 23333444 99986432 368999994 78999999999999998753
No 262
>PRK13580 serine hydroxymethyltransferase; Provisional
Probab=99.88 E-value=5.2e-20 Score=172.53 Aligned_cols=341 Identities=13% Similarity=0.058 Sum_probs=221.5
Q ss_pred cceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCC------CCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCC
Q 014936 35 KKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNG------YAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSG 108 (415)
Q Consensus 35 ~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~------y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g 108 (415)
...++|-... ...++.+.+++...+.+....+ |+-.....+++....+..++.++ .+..+|-.-+
T Consensus 49 ~~~l~LiasE------N~~s~~v~~a~~s~l~nkyaeg~pg~ryy~g~~~~d~ie~l~~~ra~~lf~--a~~anvqp~S- 119 (493)
T PRK13580 49 RSSLKLIASE------NYSSLAVQLAMGNLLTDKYAEGTPGHRFYAGCQNVDTVEWEAAEHAKELFG--AEHAYVQPHS- 119 (493)
T ss_pred hcCceEeccc------ccCCHHHHHHhcccccccCcCCCCCccccCCCchHHHHHHHHHHHHHHHhC--CCcccccCCC-
Confidence 5567776665 3457889888877766432222 33334455666666666665555 2333554444
Q ss_pred hHHHHHHHHHHhcCC-------------------------------CCEEEEcCCCCcchHHH-----HHhCCCeEEEee
Q 014936 109 CTQAIDVAMALLSRP-------------------------------GANILLPRPGFPIYELS-----AAFRHIEVRHFD 152 (415)
Q Consensus 109 ~~~al~~~~~~l~~~-------------------------------gd~vi~~~p~y~~~~~~-----~~~~g~~~~~~~ 152 (415)
|+.|+.+++.++++| ||+|+..++.++++... +.........++
T Consensus 120 g~~An~~v~~all~~~~~~p~~~~~g~~~~~~~~~~~~~~~~~~~~gd~i~~l~l~~GGHlthg~~~n~~~~~~~~~~y~ 199 (493)
T PRK13580 120 GADANLVAFWAILAHKVESPALEKLGAKTVNDLTEEDWEALRAELGNQRLLGMSLDSGGHLTHGFRPNISGKMFHQRSYG 199 (493)
T ss_pred cHHHHHHHHHHHhcccccCcchhccccccccccchhhhhhhhccCCCCEEEeecCCCCCeeecCcccchhhheeeeEecc
Confidence 567777888888876 79999887777554221 111124555566
Q ss_pred ccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCccc-cccc
Q 014936 153 LLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVP-MGVF 231 (415)
Q Consensus 153 ~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~-~~~~ 231 (415)
++++ ...+|.+++++.++++++.+++++.+|-++ .. ++++|+++|+++|+++++|++|+.+.+.+..... ....
T Consensus 200 vd~~-~g~iD~d~l~~~~~~~~plvii~g~S~~~~-~~---dl~~i~eia~~~gA~L~VD~AH~~Gligg~~~~~~~~~~ 274 (493)
T PRK13580 200 VDPD-TGLLDYDEIAALAREFKPLILVAGYSAYPR-RV---NFAKLREIADEVGAVLMVDMAHFAGLVAGKVFTGDEDPV 274 (493)
T ss_pred cCcc-cCccCHHHHHHHHhhcCCEEEEeCccccCC-Cc---CHHHHHHHHHHcCCEEEEECchhhceeccccchhhcCCC
Confidence 6543 346999999999999999999998887644 53 5778888888999999999999988776433210 0111
Q ss_pred CCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhhc-cccCCchhHHHHHHHHhhCCCcHHHHHHHHH
Q 014936 232 GSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYF-DILGDPATFIQAAVPSILQQPDEVFFKKTLN 310 (415)
Q Consensus 232 ~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~ 310 (415)
. ...++++|++|++. |.+.|++++++ ++.+.++... ...+++.++...+++..+.......+++.++
T Consensus 275 ~--~~D~vtgT~hKaL~--GP~GG~I~~~~--------~l~~~L~~a~P~i~gg~l~p~iAA~avAl~e~~~~ef~~y~~ 342 (493)
T PRK13580 275 P--HADIVTTTTHKTLR--GPRGGLVLAKK--------EYADAVDKGCPLVLGGPLPHVMAAKAVALAEARTPEFQKYAQ 342 (493)
T ss_pred C--CCcEEEeCChhhcc--CCCeEEEEecH--------HHHHHHhhCCCcccCCCccHHHHHHHHHHHHHhCccHHHHHH
Confidence 1 12288899999862 33358888865 5677664332 2233444444444444444322122366889
Q ss_pred HHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCC------CCeEE
Q 014936 311 LLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGL------KNWLR 384 (415)
Q Consensus 311 ~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~------~~~iR 384 (415)
++.++.+.|.+.|.+. |+.++.....+..+++.+.... .....+...|.+.||.+.+-..+.. ...||
T Consensus 343 ~l~~Na~~La~~L~~~-G~~vv~ggTdshIV~V~lg~~~-----~~g~~a~~~L~e~GI~vn~i~~Ptvp~g~~~~srLR 416 (493)
T PRK13580 343 QVVDNARALAEGFLKR-GARLVTGGTDNHLVLIDVTSFG-----LTGRQAESALLDAGIVTNRNSIPSDPNGAWYTSGIR 416 (493)
T ss_pred HHHHHHHHHHHHHHhc-CCCccCCCCCCCEEEEEeCCHH-----HHHHHHHHHHHHCCeEEccccCCCCCCCCCCCceEE
Confidence 9999999999999988 7773322345677787775321 1233556567888999986555443 46799
Q ss_pred EEee------CChhhHHHHHHHHHHHHHH
Q 014936 385 VTFA------VDPYSLEECLDRIKSFYQR 407 (415)
Q Consensus 385 i~~~------~~~~~l~~~l~~l~~~~~~ 407 (415)
|++. +++++++++++.|.++++.
T Consensus 417 Ig~~A~ttrg~teedi~~iad~l~~~l~~ 445 (493)
T PRK13580 417 LGTPALTTLGMGSDEMDEVAELIVKVLSN 445 (493)
T ss_pred eccchhhhcCCCHHHHHHHHHHHHHHHHh
Confidence 9983 2579999999999888764
No 263
>PTZ00094 serine hydroxymethyltransferase; Provisional
Probab=99.88 E-value=6.5e-20 Score=176.10 Aligned_cols=339 Identities=12% Similarity=0.072 Sum_probs=213.1
Q ss_pred CcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCC---CCC---cHH----HHHHHHHHHhhhCCCCCCCCcE
Q 014936 34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAP---TAG---LPL----TRRAIAEYLSRDLPYKLTPNDV 103 (415)
Q Consensus 34 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~---~~g---~~~----lr~~ia~~~~~~~~~~~~~~~i 103 (415)
.+..++|-... ...+|.+++++...+.+.....++. ..| ... .|+.+++++ +.+++++
T Consensus 33 ~~~~l~l~~se------n~~s~~v~~~~~~~l~~~y~~g~p~s~~~~g~~~~~~iE~~ar~~~a~lf------~a~~~~~ 100 (452)
T PTZ00094 33 QIEGLELIASE------NFTSRAVLECLGSCFTNKYAEGLPGNRYYGGNEVVDKIENLCQKRALEAF------GLDPEEW 100 (452)
T ss_pred HHcCeeEeccc------ccCCHHHHHHhcchhhccccCCCCCccccccchHHHHHHHHHHHHHHHHh------CCCcccc
Confidence 35678988886 4557889999988875422112221 111 222 345666666 3466777
Q ss_pred EEe---CChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHh----------CCCeEEEeeccCCCCCCCChhHHHhhc
Q 014936 104 FVT---SGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAF----------RHIEVRHFDLLPDKGWEVDLDDIESLA 170 (415)
Q Consensus 104 ~i~---~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~----------~g~~~~~~~~~~~~~~~~~~~~l~~~~ 170 (415)
.++ +||++++.+++.++.++||+|++....|.+....... .+.++..+++++ ++.+|+++|++.+
T Consensus 101 ~~~~~~~sgt~an~~v~~al~~~gd~Ii~~~~ehg~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~--~g~id~~~L~~~l 178 (452)
T PTZ00094 101 GVNVQPYSGSPANFAVYTALLQPHDRIMGLDLPSGGHLTHGFYTAKKKVSATSIYFESLPYQVNE--KGLIDYDKLEELA 178 (452)
T ss_pred eeecCCCchHHHHHHHHHHhcCCCCEEEecccccCCcccccccccccccccceeeeeeeecccCC--CCCcCHHHHHHHH
Confidence 666 7899999999999999999999998888765443211 112334444543 3568999999998
Q ss_pred CC-CceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCc-ccccccCCCCCeEEEccCccccC
Q 014936 171 DQ-NTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPF-VPMGVFGSTVPILTLGSLSKRWI 248 (415)
Q Consensus 171 ~~-~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~-~~~~~~~~~~~~i~~~s~sK~~~ 248 (415)
+. +++.+++. ++.+|...| +++|.++|+++|+++++|++|+.+....... .++. .. .++++|++|++.
T Consensus 179 ~~~~~~lvi~~--~s~~g~~~d---i~~I~~i~~~~ga~l~vDaaq~~G~i~~~~~~~~~~--~~---D~l~~S~hK~l~ 248 (452)
T PTZ00094 179 KAFRPKLIIAG--ASAYPRDID---YKRFREICDSVGAYLMADIAHTSGLVAAGVLPSPFP--YA---DVVTTTTHKSLR 248 (452)
T ss_pred HHhCCCEEEEe--CCCCCCccC---HHHHHHHHHHcCCEEEEeccchhccccCCCCCCCCC--CC---cEEEcCCccCCC
Confidence 54 55655543 335888855 6666777889999999999999866543221 1211 12 278899999853
Q ss_pred CCCceEEEEEeeCCCCCCChHHHHHHHHhhc--cccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcC
Q 014936 249 VPGWRLGWFVTTDPCGMFRKPKVVERMKKYF--DILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEI 326 (415)
Q Consensus 249 ~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 326 (415)
. .+.|++++++.. . ..+...+.... .+.++++.....++..+++.......++..+++.++++++.+.|.+.
T Consensus 249 G--P~Gg~l~~~~~~--~--~~l~~~~~~~~~p~~~G~~~~~~iaal~~al~~~~~~~~~~~~~~i~~l~~~l~~~L~~~ 322 (452)
T PTZ00094 249 G--PRSGLIFYRKKV--K--PDIENKINEAVFPGLQGGPHNHQIAAIAVQLKEVQSPEWKEYAKQVLKNAKALAAALEKR 322 (452)
T ss_pred C--CCceEEEEeccc--c--hHHHHhhccccCCCCCCCchHHHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHhC
Confidence 3 334888775421 1 01222222111 11235566666666666654323456677889999999999999876
Q ss_pred CCCcCCCCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEE-cCCCCC----CCCeEEEEee--C----ChhhHH
Q 014936 327 PCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIIL-PGTAVG----LKNWLRVTFA--V----DPYSLE 395 (415)
Q Consensus 327 ~~~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~-~g~~~~----~~~~iRi~~~--~----~~~~l~ 395 (415)
++.+..........++.+... +. +.. .+..+|+++||.+. ++..+. .+++||+++. + +++|++
T Consensus 323 -g~~v~~~~~~~~~~~v~~~~~---~~-~~~-~~~~~L~~~gI~vs~~~~p~~~~~~~~~~vRis~~~~tt~g~~~~di~ 396 (452)
T PTZ00094 323 -GYDLVTGGTDNHLVLVDLRPF---GI-TGS-KMEKLLDAVNISVNKNTIPGDKSALNPSGVRLGTPALTTRGAKEKDFK 396 (452)
T ss_pred -CcEEecCCCCCceEeecCCcC---CC-CHH-HHHHHHHHCCcEEecccCCCCCcCCCCCeEEECCHHHHhCCCCHHHHH
Confidence 766332111122344444321 11 334 45555677899994 444332 1579999993 2 489999
Q ss_pred HHHHHHHHHHHHH
Q 014936 396 ECLDRIKSFYQRH 408 (415)
Q Consensus 396 ~~l~~l~~~~~~~ 408 (415)
.+++.|.++++..
T Consensus 397 ~l~~~l~~~~~~~ 409 (452)
T PTZ00094 397 FVADFLDRAVKLA 409 (452)
T ss_pred HHHHHHHHHHHHH
Confidence 9999999988753
No 264
>PRK05613 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.88 E-value=1.9e-19 Score=170.17 Aligned_cols=228 Identities=16% Similarity=0.121 Sum_probs=162.2
Q ss_pred CcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchH----HHHHhCCCeEEEeec
Q 014936 78 GLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYE----LSAAFRHIEVRHFDL 153 (415)
Q Consensus 78 g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~----~~~~~~g~~~~~~~~ 153 (415)
....+++.++++.+ .+..++++++++|+.+++.++.++||+|+++...|.+.. ..+...|+++..++
T Consensus 70 t~~~le~~la~l~g--------~~~~v~fsSG~~Ai~~al~~ll~~Gd~VI~~~~~y~~t~~~~~~~l~~~Gi~v~~vd- 140 (437)
T PRK05613 70 TVEALENRIASLEG--------GVHAVAFASGQAAETAAILNLAGAGDHIVTSPRLYGGTETLFLVTLNRLGIEVTFVE- 140 (437)
T ss_pred HHHHHHHHHHHHhC--------CCeEEEeCCHHHHHHHHHHHhcCCCCEEEECCCccHHHHHHHHHHHHhcCeEEEEEC-
Confidence 45778888888872 245555566668888888888899999999999999764 34577899998886
Q ss_pred cCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCC
Q 014936 154 LPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS 233 (415)
Q Consensus 154 ~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~ 233 (415)
++ .|++++++++++++++|++.++.||+|.+ .++++|+++|+++|+++|+|.+++.... ..++ .++.
T Consensus 141 ~~-----~d~e~l~~~l~~~tk~V~~e~~~Np~~~v---~di~~I~~la~~~gi~livD~t~a~g~~----~~p~-~~Ga 207 (437)
T PRK05613 141 NP-----DDPESWQAAVQPNTKAFFGETFANPQADV---LDIPAVAEVAHRNQVPLIVDNTIATAAL----VRPL-ELGA 207 (437)
T ss_pred CC-----CCHHHHHHhCCccCeEEEEECCCCCCCcc---cCHHHHHHHHHHcCCeEEEECCCccccc----cChH-HhCC
Confidence 22 27899999999999999999999999988 4588888888899999999999876332 1222 2333
Q ss_pred CCCeEEEccCccccCCCCceEEEEEeeCCCCCCC----------------------------hHHHHHHHH--hhccccC
Q 014936 234 TVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFR----------------------------KPKVVERMK--KYFDILG 283 (415)
Q Consensus 234 ~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~----------------------------~~~~~~~~~--~~~~~~~ 283 (415)
+ +++.|++|.++..|.-+|.+++.+....+. ...+..+.. .......
T Consensus 208 D---ivv~S~~K~l~G~gd~~gG~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~ 284 (437)
T PRK05613 208 D---VVVASLTKFYTGNGSGLGGVLIDGGKFDWTVERDGKPVFPYFVTPDPAYHGLKYADLGAPAFGLKARAGLLRDTGA 284 (437)
T ss_pred C---EEEeeccceecCCCcceeEEEEecCcccccccccccccCCCCCCCccccccccccccchHHHHHHHHHHHHHhcCC
Confidence 3 888899999877776667766632110000 001111111 1123345
Q ss_pred CchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCC
Q 014936 284 DPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKP 335 (415)
Q Consensus 284 ~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p 335 (415)
..+|.....+..-|+. +.-+.++..+++..+.+.|++.|.+..+.+|
T Consensus 285 ~~~p~~a~l~~rgl~T-----L~lR~~~~~~nA~~lA~~L~~hp~V~~V~yP 331 (437)
T PRK05613 285 TLSPFNAWVTAQGLDT-----LSLRLERHNENAIKVAEFLNNHEKVAKVNFA 331 (437)
T ss_pred CCCHHHHHHHHcccCc-----HHHHHHHHHHHHHHHHHHHHcCCCcceEECC
Confidence 6777777777777765 7788888899999999999988776544443
No 265
>PLN02724 Molybdenum cofactor sulfurase
Probab=99.88 E-value=7.9e-20 Score=186.35 Aligned_cols=340 Identities=13% Similarity=0.079 Sum_probs=221.3
Q ss_pred eeEecccCCCCCCCCCCcHHHHHHHHHHHhcC---CCCCCC----CCCCcHHHHHHHHHHHhhhCCCCCCCC--cEEEeC
Q 014936 37 VISLAMGDPTVHSCFHTTHVATEAVAEALLSE---KFNGYA----PTAGLPLTRRAIAEYLSRDLPYKLTPN--DVFVTS 107 (415)
Q Consensus 37 ~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~---~~~~y~----~~~g~~~lr~~ia~~~~~~~~~~~~~~--~i~i~~ 107 (415)
.+.|+.+..+ ++++..+.+++.+..... .+..|. ...-+.+.|+.+|+++ +++++ .|++|+
T Consensus 35 ~iYLD~Aatt----~~~~~~V~~~~~~~~~~~~~np~s~~~~s~~~~~~~e~aR~~ia~~l------ga~~~~~~VvFts 104 (805)
T PLN02724 35 VVYLDHAGAT----LYSESQLEAALADFSSNVYGNPHSQSDSSMRSSDTIESARQQVLEYF------NAPPSDYACVFTS 104 (805)
T ss_pred CEeEeCCCCC----CCCHHHHHHHHHHHHhhccCCCCcCcchhhhHHHHHHHHHHHHHHHh------CCCccceEEEEeC
Confidence 5777777532 233455666665554321 111111 1123678889999988 44554 589999
Q ss_pred ChHHHHHHHHHHh-cCCCCEEEEcCCCCcchHH---HHHhCCCeEEEeeccCCC------CCCCCh--hHHHhhc-----
Q 014936 108 GCTQAIDVAMALL-SRPGANILLPRPGFPIYEL---SAAFRHIEVRHFDLLPDK------GWEVDL--DDIESLA----- 170 (415)
Q Consensus 108 g~~~al~~~~~~l-~~~gd~vi~~~p~y~~~~~---~~~~~g~~~~~~~~~~~~------~~~~~~--~~l~~~~----- 170 (415)
|+|+++++++.++ .++||+|++..-.|.+... .++..|+++..++.+... ...+++ +.+++.+
T Consensus 105 naT~alnlva~~l~~~~gd~Iv~t~~eH~svl~~~~~a~~~G~~v~~v~~~~~~~~~~~~~g~~~~~~~~l~~~~~~~l~ 184 (805)
T PLN02724 105 GATAALKLVGETFPWSSESHFCYTLENHNSVLGIREYALEKGAAAIAVDIEEAANQPTNSQGSVVVKSRGLQRRNTSKLQ 184 (805)
T ss_pred ChHHHHHHHHHHCCCCCCCeEEEeeccccchHHHHHHHHHcCCeEEeccchhccccccccccccccchhhhhhhhhhhhc
Confidence 9999999999887 5789999998888876543 345679999998875211 112332 5566543
Q ss_pred -----CCCceEEEecCCCCccccCCCHHHHHHHHHHHhhc-----CcEEEEccccCCcccCCCCcccccccCCCCCeEEE
Q 014936 171 -----DQNTVALVIINPGNPCGNVYSYQHLQKLAETANKL-----KTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTL 240 (415)
Q Consensus 171 -----~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~-----~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~ 240 (415)
.++++++.+++.+|.||.++|.+.+.++.+.++.+ ++++++|.+++. +..+..+..++.+ +++
T Consensus 185 ~~~~~~~~t~LVa~~~vsN~tG~i~pi~~i~~~~~~~~~~~~~~g~~~v~vDaaQ~~----g~~piDv~~~~~D---fl~ 257 (805)
T PLN02724 185 KREDDGEAYNLFAFPSECNFSGAKFPLDLVKLIKDNQHSNFSKSGRWMVLLDAAKGC----GTSPPDLSRYPAD---FVV 257 (805)
T ss_pred cccccCCCcceEEEEccccCCCCcCCHHHHHHHHHhcccccccCcceEEEeehhhhc----CCCCCChhhcCCC---EEE
Confidence 14568899999999999999988666555544332 368999999987 4455556666555 788
Q ss_pred ccCccccC-CCCceEEEEEeeCCCCCCChHHHHHHHHhh-------------------------ccccCCchhHHHHHHH
Q 014936 241 GSLSKRWI-VPGWRLGWFVTTDPCGMFRKPKVVERMKKY-------------------------FDILGDPATFIQAAVP 294 (415)
Q Consensus 241 ~s~sK~~~-~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~-------------------------~~~~~~~~~~~~~a~~ 294 (415)
.|++|+|+ ..| +|+++++++ +.+.+... ..-.++++..+..++.
T Consensus 258 ~S~HK~~GgP~G--~G~L~vr~~--------~~~~l~p~~~GGg~~~~~~~~~~~~~~~~~~~~rfE~GT~n~~~i~~l~ 327 (805)
T PLN02724 258 VSFYKIFGYPTG--LGALLVRRD--------AAKLLKKKYFGGGTVAASIADIDFVKRRERVEQRFEDGTISFLSIAALR 327 (805)
T ss_pred EecceeccCCCC--ceEEEEehh--------hhhhhcCCccCCCceEEEecccceeeccccHHHHhcCCCcchhHHHHHH
Confidence 89999987 346 888888652 22222111 1112456666666666
Q ss_pred HhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCC------CCcCCCCCC--------CceEEEEecCccccCCCCCHHHHH
Q 014936 295 SILQQPDEVFFKKTLNLLKQSVDICYNKIKEIP------CISCPHKPE--------GSMAVMLKLNLSLLDDIIDDIDFC 360 (415)
Q Consensus 295 ~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~------~~~~~~~p~--------~g~~~~~~l~~~~~~~~~~~~~~~ 360 (415)
++++...+..++...++.+++.+++.+.|.+++ ++.++ .+. .+..+.+.+.... +..-....+
T Consensus 328 aal~~l~~ig~~~I~~~~~~L~~~l~~~L~~l~~~~g~~~v~iy-g~~~~~~~~~~r~~ivsFnv~~~~--~~~v~~~~v 404 (805)
T PLN02724 328 HGFKLLNRLTISAIAMHTWALTHYVANSLRNLKHGNGAPVCVLY-GNHTFKLEFHIQGPIVTFNLKRAD--GSWVGHREV 404 (805)
T ss_pred HHHHHHHHhChHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEc-CCCCCCCCcccccCEEEEEEEcCC--CCEeCHHHH
Confidence 666543333467778889999999999998875 45533 221 2334444443211 000123445
Q ss_pred HHHHhhcCeEEEcCCCCCC-----------------------------------CCeEEEEee--CChhhHHHHHHHHHH
Q 014936 361 FKLAKEESVIILPGTAVGL-----------------------------------KNWLRVTFA--VDPYSLEECLDRIKS 403 (415)
Q Consensus 361 ~~ll~~~gi~v~~g~~~~~-----------------------------------~~~iRi~~~--~~~~~l~~~l~~l~~ 403 (415)
..++.++||.++.|..|.. .+.+|+|++ ++.+|++.+++.|++
T Consensus 405 ~~l~~~~gI~vR~G~~Ca~~~~~~~lg~~~~~l~~~~~~~~~c~~~~~~~~~~~~G~vRvS~g~ynt~eDvd~lv~~l~~ 484 (805)
T PLN02724 405 EKLASLSGIQLRTGCFCNPGACAKYLGLSHKDLQANFEAGHVCWDDQDVIHGRPTGAVRVSFGYMSTFEDCQKFIDFIIS 484 (805)
T ss_pred HHHHHhcCcEEeeccccCchHHHHHcCCCHHHHHHHhhcCCccCchhheecCcccceEEEEcCccCCHHHHHHHHHHHHH
Confidence 6677788999999987741 278999995 688999999999998
Q ss_pred HHH
Q 014936 404 FYQ 406 (415)
Q Consensus 404 ~~~ 406 (415)
.+-
T Consensus 485 ~~~ 487 (805)
T PLN02724 485 SFV 487 (805)
T ss_pred Hhh
Confidence 653
No 266
>PF01041 DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransferase family; InterPro: IPR000653 This entry represents a family that are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions. The family includes StsA P72454 from SWISSPROT, StsC P77952 from SWISSPROT and StsS []. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase 2.6.1.50 from EC, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin [].; PDB: 2FNI_A 2FNU_A 2FN6_A 2PO3_A 3UWC_A 1O61_B 1O62_B 1O69_B 1B9I_A 1B9H_A ....
Probab=99.88 E-value=5.2e-20 Score=172.20 Aligned_cols=306 Identities=20% Similarity=0.273 Sum_probs=205.5
Q ss_pred HHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhc-CCCCEEEEcCCC
Q 014936 55 HVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLS-RPGANILLPRPG 133 (415)
Q Consensus 55 ~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~-~~gd~vi~~~p~ 133 (415)
++-.+++.+.++++.+..+++ -..++++++++|+ ..++++.++++|.|+.+++.++. ++||+|+++..+
T Consensus 5 ~e~~~~v~~~l~s~~~~~~g~--~~~~fE~~~a~~~--------g~~~~~~~~sgt~Al~~al~~l~~~~gdeVi~p~~t 74 (363)
T PF01041_consen 5 EEEIDAVLEVLRSGWLSTYGP--YVEEFEKEFAEYF--------GVKYAVAVSSGTSALHLALRALGLGPGDEVIVPAYT 74 (363)
T ss_dssp HHHHHHHHHHHHHTCCSSSSH--HHHHHHHHHHHHH--------TSSEEEEESSHHHHHHHHHHHTTGGTTSEEEEESSS
T ss_pred HHHHHHHHHHHHhCCccCCCH--HHHHHHHHHHHHh--------CCCeEEEeCChhHHHHHHHHhcCCCcCceEecCCCc
Confidence 566778888888775544443 4689999999999 57899999999999999999985 789999999999
Q ss_pred CcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEcc
Q 014936 134 FPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADE 213 (415)
Q Consensus 134 y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De 213 (415)
|......+...|++++.+++++ +.+.+|++.+++++++++++|+++|. .|.. .++.+|.++|+++|+++|+|.
T Consensus 75 ~~~~~~ai~~~G~~pv~~Di~~-~~~~id~~~~~~~i~~~t~ai~~~h~---~G~~---~d~~~i~~~~~~~~i~lIeD~ 147 (363)
T PF01041_consen 75 FPATASAILWAGAEPVFVDIDP-ETLNIDPEALEKAITPKTKAILVVHL---FGNP---ADMDAIRAIARKHGIPLIEDA 147 (363)
T ss_dssp -THHHHHHHHTT-EEEEE-BET-TTSSB-HHHHHHHHHTTEEEEEEE-G---GGB------HHHHHHHHHHTT-EEEEE-
T ss_pred chHHHHHHHHhccEEEEEeccC-CcCCcCHHHHHHHhccCccEEEEecC---CCCc---ccHHHHHHHHHHcCCcEEEcc
Confidence 9999999999999999999976 56789999999999999999999885 3555 578999999999999999999
Q ss_pred ccCCcc-cCCCCcccccccCCCCCeEEEccCc--cccCCCCceEEEEEeeCCCCCCChHHHHHHHHhhcccc--------
Q 014936 214 VYGHLV-FGDKPFVPMGVFGSTVPILTLGSLS--KRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDIL-------- 282 (415)
Q Consensus 214 ~~~~~~-~~~~~~~~~~~~~~~~~~i~~~s~s--K~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~-------- 282 (415)
+++.+. +.|. .+..++. +.++||+ |.+.. ...|++++++ +++.++++.+....
T Consensus 148 a~a~g~~~~g~---~~G~~gd----~~~fSf~~~K~i~~--geGG~v~~~~-------~~~~~~~~~~~~~g~~~~~~~~ 211 (363)
T PF01041_consen 148 AQAFGARYKGR---PVGSFGD----IAIFSFHPTKIITT--GEGGAVVTND-------PELAERARALRNHGRSRDAFRR 211 (363)
T ss_dssp TTTTT-EETTE---ETTSSSS----EEEEESSTTSSS-S--SS-EEEEEST-------HHHHHHHHHHTBTTEETSECST
T ss_pred ccccCceeCCE---eccCCCC----ceEecCCCCCCCcC--CCCeeEEecH-------HHHHHHhhhhhccCcCcccccc
Confidence 999865 3332 2333432 6667774 77533 3357887765 46777776654321
Q ss_pred ----------CCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCc----e-EEEEecCc
Q 014936 283 ----------GDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGS----M-AVMLKLNL 347 (415)
Q Consensus 283 ----------~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g----~-~~~~~l~~ 347 (415)
...+.+..+.+..-|+ .+++..++-+++.+.+.+.|..++++.....+... + .+.+.++.
T Consensus 212 ~~~~~~~g~n~rm~~~~AAigl~QL~-----~L~~~~~~R~~~a~~y~~~L~~~~~~~~~~~~~~~~~~~~~~f~i~~~~ 286 (363)
T PF01041_consen 212 YRHELPPGYNFRMSELQAAIGLAQLK-----RLDEIIARRRENAQRYREALAGIPGIKPPPIPDGAERSSYYRFPIRLPD 286 (363)
T ss_dssp TEESSSS--B-B-BHHHHHHHHHHHH-----THHHHHHHHHHHHHHHHHHHTTGTTEEEEGCGTTTEEBCESSEEEEETC
T ss_pred ccccccCCcccccHHHHHHHHHHHHH-----HhhhhHHHHHHHHHHHHHHHhcCCCcccccccccccccccccccccccc
Confidence 1223333333334443 37788888889999999999988776322222221 1 23344443
Q ss_pred cccCCCCCHHHHHHHHHhhcCeEEEcCCC-CC-------C----------------CCeEEEEe--eCChhhHHHHHHHH
Q 014936 348 SLLDDIIDDIDFCFKLAKEESVIILPGTA-VG-------L----------------KNWLRVTF--AVDPYSLEECLDRI 401 (415)
Q Consensus 348 ~~~~~~~~~~~~~~~ll~~~gi~v~~g~~-~~-------~----------------~~~iRi~~--~~~~~~l~~~l~~l 401 (415)
... .+-.++...| ++.||.+.+... +. . ...+-+.+ ..++++++..++.|
T Consensus 287 ~~~---~~rd~l~~~L-~~~GI~~~~~~~~pl~~~~~~~~~~~~~~~~~P~ae~l~~r~l~LP~~~~lt~edv~~I~~~i 362 (363)
T PF01041_consen 287 EAL---ADRDELVEAL-RARGIETRPHYPKPLHRQPVYRSYPYYAPGDLPNAERLSQRLLSLPIHPRLTEEDVDYIAEAI 362 (363)
T ss_dssp CGC---STHHHHHHHH-HHTTBEEBCSTSSCGGGSGGGTTGEEEETSSSHHHHHHHHHEEEEEHSTTSCHHHHHHHHHHH
T ss_pred ccc---chHHHHHHHH-HHCCCcccccccCchhhhHHHHhcCccccCCCHHHHHHHhCeEECcCCCCCCHHHHHHHhhcc
Confidence 111 1344555554 677999987552 10 0 12355555 36788888888776
Q ss_pred H
Q 014936 402 K 402 (415)
Q Consensus 402 ~ 402 (415)
+
T Consensus 363 r 363 (363)
T PF01041_consen 363 R 363 (363)
T ss_dssp H
T ss_pred C
Confidence 4
No 267
>COG0001 HemL Glutamate-1-semialdehyde aminotransferase [Coenzyme metabolism]
Probab=99.87 E-value=1.8e-19 Score=163.48 Aligned_cols=343 Identities=18% Similarity=0.128 Sum_probs=224.2
Q ss_pred cCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHH
Q 014936 33 NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQA 112 (415)
Q Consensus 33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~a 112 (415)
.++.+||+..+.-..-. --.+|.|.+|+++++..+. .|+.| .+++-.+|+.+.+..+ ..+.+-+++++|+|
T Consensus 51 DGn~YIDy~~~~Gp~il-GH~~p~V~~Av~~~l~~G~--~fg~P---te~Ei~~Aell~~~~p---~~e~vrfvnSGTEA 121 (432)
T COG0001 51 DGNEYIDYVLGWGPLIL-GHAHPAVVEAVQEQLERGL--SFGAP---TELEVELAELLIERVP---SIEKVRFVNSGTEA 121 (432)
T ss_pred CCCEeeehhccCccccc-CCCCHHHHHHHHHHHHhcC--CCCCC---CHHHHHHHHHHHHhcC---cccEEEEecchhHH
Confidence 48899999888732211 1246889999999999875 45543 2555666666655433 45899999999999
Q ss_pred HHHHHHHhc--CCCCEEEEcCCCCcchHHHHH-hCCCeEEEe--ecc---CC--------CCCCCChhHHHhhcCCC--c
Q 014936 113 IDVAMALLS--RPGANILLPRPGFPIYELSAA-FRHIEVRHF--DLL---PD--------KGWEVDLDDIESLADQN--T 174 (415)
Q Consensus 113 l~~~~~~l~--~~gd~vi~~~p~y~~~~~~~~-~~g~~~~~~--~~~---~~--------~~~~~~~~~l~~~~~~~--~ 174 (415)
...+++... -.-|+|+..+-||++..+.+. ..|...... |.. +. -.| -|++.++++++.. .
T Consensus 122 tmsAiRlARa~TgR~kIikF~G~YHG~~D~~lv~agsg~~t~g~p~s~Gvp~~~a~~ti~~~y-ND~~al~~~~~~~g~~ 200 (432)
T COG0001 122 TMSAIRLARAYTGRDKIIKFEGCYHGHSDSLLVKAGSGAATLGSPSSPGVPADVAKHTLVLPY-NDLEALEEAFEEYGDD 200 (432)
T ss_pred HHHHHHHHHHhhCCCeEEEEcCCCCCCccHHHhhcCcCcccCCCCCCCCCChhhhccEEEecC-CCHHHHHHHHHHcCCc
Confidence 999998864 122899999999998776543 333111100 100 00 011 2899999988764 5
Q ss_pred eEEEecCC--CCcccc-CCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCC
Q 014936 175 VALVIINP--GNPCGN-VYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPG 251 (415)
Q Consensus 175 ~~v~i~~p--~nptG~-~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G 251 (415)
.+.+|+.| .| .|. ....+.+++|.++|+++|+++|.||+..++...-.+......+.+| +.++.|. ...|
T Consensus 201 IAaVIvEPv~gn-~g~i~p~~~Fl~~Lr~lt~e~G~lLI~DEViTGFR~~~gGaq~~~gi~PD-----lttlGKi-IGGG 273 (432)
T COG0001 201 IAAVIVEPVAGN-MGVVPPEPGFLEGLRELTEEHGALLIFDEVITGFRVALGGAQGYYGVEPD-----LTTLGKI-IGGG 273 (432)
T ss_pred EEEEEeccccCC-CCCCCCCHHHHHHHHHHHHHcCcEEEEecchhhcccCCcccccccCcCcc-----hhhhhhh-hcCC
Confidence 67788888 45 555 4567779999999999999999999999877653333344444443 5578999 7899
Q ss_pred ceEEEEEeeCCCCCCChHHHHHHHHhhc----cccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHh----
Q 014936 252 WRLGWFVTTDPCGMFRKPKVVERMKKYF----DILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKI---- 323 (415)
Q Consensus 252 ~r~G~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l---- 323 (415)
+++|.+.++. ++++.+.... .-+...+|+++.|..+.|+....+ +...+++.+..+.|.+.|
T Consensus 274 lP~ga~gGr~--------eiM~~~~p~g~vyqaGT~sgnplamaAG~atl~~l~~~--~~~y~~l~~~~~~L~~gl~~~~ 343 (432)
T COG0001 274 LPIGAFGGRA--------EIMEQLAPLGPVYQAGTLSGNPLAMAAGLATLEELMTE--EGVYERLDALGERLAEGLRAAA 343 (432)
T ss_pred cceeeeccHH--------HHHhhhCCCCCccccCCCCCcHHHHHHHHHHHHHHHhc--ccHHHHHHHHHHHHHHHHHHHH
Confidence 9999999865 6777654432 234577899999988888653210 013444444444444444
Q ss_pred hcCCCCcCCCCCCCceEEEEecCccccC--------CCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEeeCChhhHH
Q 014936 324 KEIPCISCPHKPEGSMAVMLKLNLSLLD--------DIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFAVDPYSLE 395 (415)
Q Consensus 324 ~~~~~~~~~~~p~~g~~~~~~l~~~~~~--------~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~~~l~ 395 (415)
.+. ++.......+++|.+. +...... +...-..+...+| ++||.+.|+.+ ...=+|..+++++|+
T Consensus 344 ~~~-g~~~~v~~~gsm~~i~-F~~~~~~n~~da~~sd~~~~~~~~~~~l-~~GV~l~ps~~----ea~flS~ahte~di~ 416 (432)
T COG0001 344 ERH-GIPLTVNRVGSMFGIF-FTEEGVRNYADAKRSDVERFAKFFHHLL-NRGVYLAPSQF----EAGFLSTAHTEEDID 416 (432)
T ss_pred HHh-CCCeEEeeecceEEEE-ecCCCCCCHHHHHhhchHHHHHHHHHHH-hCCcccCCccc----cceeeecccCHHHHH
Confidence 444 5553323344444332 2221010 1111345566555 45999998753 345677789999999
Q ss_pred HHHHHHHHHHHHHH
Q 014936 396 ECLDRIKSFYQRHA 409 (415)
Q Consensus 396 ~~l~~l~~~~~~~~ 409 (415)
..++.+.++++++.
T Consensus 417 ~~~~a~~~~~~~~~ 430 (432)
T COG0001 417 RTLEAADEAFKELA 430 (432)
T ss_pred HHHHHHHHHHHHhh
Confidence 99999998887654
No 268
>TIGR00709 dat 2,4-diaminobutyrate 4-transaminases. This family consists of L-diaminobutyric acid transaminases. This general designation covers both 2.6.1.76 (diaminobutyrate-2-oxoglutarate transaminase, which uses glutamate as the amino donor in DABA biosynthesis), and 2.6.1.46 (diaminobutyrate--pyruvate transaminase, which uses alanine as the amino donor). Most members with known function are 2.6.1.76, and at least some annotations as 2.6.1.46 in current databases at time of model revision are incorrect. A distinct branch of this family contains examples of 2.6.1.76 nearly all of which are involved in ectoine biosynthesis. A related enzyme is 4-aminobutyrate aminotransferase (EC 2.6.1.19), also called GABA transaminase. These enzymes all are pyridoxal phosphate-containing class III aminotransferase.
Probab=99.87 E-value=5.5e-19 Score=168.79 Aligned_cols=355 Identities=14% Similarity=0.091 Sum_probs=211.5
Q ss_pred ccCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCc-EEEeCChH
Q 014936 32 KNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPND-VFVTSGCT 110 (415)
Q Consensus 32 ~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~-i~i~~g~~ 110 (415)
.+|+.++||..|...... --.+|.+.+++.+++......... ....+.+..+|+.+.+..+....... ++++++|+
T Consensus 36 ~dG~~ylD~~~g~~~~~l-Gh~~p~i~~ai~~q~~~~~~~~~~--~~~~~~~~~lae~L~~~~p~~~~~~~~~f~~~sGs 112 (442)
T TIGR00709 36 VEGKEYLDFLAGAGTLAL-GHNHPNMKQKILDYLQSGLPLHTL--DLTTPLKDAFIEALLNIIPKRKMDYKLQFPGPSGA 112 (442)
T ss_pred CCCCEEEEccccHhhhcC-CCCCHHHHHHHHHHHHhccCcccc--ccCcHHHHHHHHHHHHhCCCcCCCccEEEeCCCHH
Confidence 358899999888532211 124789999999988753211110 01124555556655443221101124 55668999
Q ss_pred HHHHHHHHHhcC-C-CCEEEEcCCCCcchHHHHHhCCC-------------eEEEeeccCCCCCCC--------Ch----
Q 014936 111 QAIDVAMALLSR-P-GANILLPRPGFPIYELSAAFRHI-------------EVRHFDLLPDKGWEV--------DL---- 163 (415)
Q Consensus 111 ~al~~~~~~l~~-~-gd~vi~~~p~y~~~~~~~~~~g~-------------~~~~~~~~~~~~~~~--------~~---- 163 (415)
+|++.+++.... . ..+|+....+|++....+..... .+..++.. +.+.. +.
T Consensus 113 EA~e~AlklAr~~tgr~~Ii~~~~~yHG~t~~~~s~t~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 190 (442)
T TIGR00709 113 DAVEAAIKLAKTYTGRTNVISFSGGFHGMTIGALAVTGNLFAKNAVGMLMPGVQFMPYP--HEYRCPFGIGGEAGSNASI 190 (442)
T ss_pred HHHHHHHHHHHHhcCCCeEEEEcCCcCCchHHHHhhcCChhhhccCCCCCCCcEEeCCC--ccccccccCCchhHHHHHH
Confidence 999999987641 2 25799999999987665543211 11222211 11111 11
Q ss_pred hHHHhhcC-----CCceEEEecCC-CCccc-cCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCC
Q 014936 164 DDIESLAD-----QNTVALVIINP-GNPCG-NVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVP 236 (415)
Q Consensus 164 ~~l~~~~~-----~~~~~v~i~~p-~nptG-~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~ 236 (415)
+.+++.+. ....+.++..| ++..| ..+|.+.++++.++|++||+++|.||++.++...|.. .....++..+.
T Consensus 191 ~~~~~~~~~~~~~~~~iaavi~Epi~g~~G~~~~~~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~-~a~~~~gv~PD 269 (442)
T TIGR00709 191 EYFENFIEDVESGVDKPAAVILEAIQGEGGVVAAPSEWLQKIREVTRKHDIKLILDEVQAGFGRSGTM-FAFEHAGIEPD 269 (442)
T ss_pred HHHHHHHHhhccCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCCch-hHHHHcCCCCc
Confidence 11333332 12234444444 44445 5589999999999999999999999999998776642 22223333333
Q ss_pred eEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhh-ccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHH
Q 014936 237 ILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKY-FDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQS 315 (415)
Q Consensus 237 ~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~ 315 (415)
++ +++|.++. |+++|++++++ + .+.+... ...+++.++++++++.+.|+...++ ...++++++
T Consensus 270 iv---~~gK~l~~-G~Pigav~~~~--------~-~~~~~~~~~~~T~~gnpla~aaa~a~L~~i~~~---~l~~~~~~~ 333 (442)
T TIGR00709 270 FV---VMSKAVGG-GLPLAVLLIAP--------E-FDAWQPAGHTGTFRGNQLAMVTGTEALNYWKDD---NLAQNAQER 333 (442)
T ss_pred EE---EEcccccC-CcccEEEEEch--------H-HhccCCCcCCCCCCcCHHHHHHHHHHHHHHHhc---CHHHHHHHH
Confidence 34 37999766 89999999865 3 2332221 2345678999999999998653222 344555666
Q ss_pred HHHHHHHhhc----CCCCcCCCCCCCceEEEEecCccc-cCC----CC---CHHHHHHHHHhhcCeEEEcCCCCCCCCeE
Q 014936 316 VDICYNKIKE----IPCISCPHKPEGSMAVMLKLNLSL-LDD----II---DDIDFCFKLAKEESVIILPGTAVGLKNWL 383 (415)
Q Consensus 316 ~~~l~~~l~~----~~~~~~~~~p~~g~~~~~~l~~~~-~~~----~~---~~~~~~~~ll~~~gi~v~~g~~~~~~~~i 383 (415)
.+++.+.|++ .|.+. . ...-|+++.+.+.... ..+ .. .....+...+.++||.+.+.... .+.+
T Consensus 334 g~~l~~~L~~l~~~~~~v~-~-vrG~Gl~~~ie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~~~~--~~~l 409 (442)
T TIGR00709 334 GERITSFLDDMIKEHPCIG-N-VRGRGLMQGIMIVDERQSKDATGAYPRDCELAAAIQGACFENGLLLETGGRE--GEVF 409 (442)
T ss_pred HHHHHHHHHHHHHhCCCee-e-eeccceEEEEEEccCcccccccccCCcchHHHHHHHHHHHHCCeEEeecCCC--CCEE
Confidence 6666666654 33332 1 3455777777774321 000 00 01222333445679998764322 3688
Q ss_pred EEEee--CChhhHHHHHHHHHHHHHHHHHHh
Q 014936 384 RVTFA--VDPYSLEECLDRIKSFYQRHAKQL 412 (415)
Q Consensus 384 Ri~~~--~~~~~l~~~l~~l~~~~~~~~~~~ 412 (415)
|+.+. .++++++++++++.+++.+..+++
T Consensus 410 ~~~Ppl~it~~ei~~~~~~l~~~l~~~~~~~ 440 (442)
T TIGR00709 410 RLLCPITIDQEECEEGISRFKQAVEEALAEV 440 (442)
T ss_pred EEECCCCCCHHHHHHHHHHHHHHHHHHHHHh
Confidence 98884 789999999999999998876654
No 269
>cd00615 Orn_deC_like Ornithine decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to ornithine decarboxylase (ODC), arginine decarboxylase (ADC) and lysine decarboxylase (LDC). ODC is a dodecamer composed of six homodimers and catalyzes the decarboxylation of tryptophan. ADC catalyzes the decarboxylation of arginine and LDC catalyzes the decarboxylation of lysine. Members of this family are widely found in all three forms of life.
Probab=99.87 E-value=7.1e-21 Score=172.85 Aligned_cols=226 Identities=15% Similarity=0.142 Sum_probs=155.3
Q ss_pred CCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCC
Q 014936 77 AGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPD 156 (415)
Q Consensus 77 ~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~ 156 (415)
.-+.++++.+|++++ ..+.+++++|+++++.+++.+++++||+|+++.++|.+....+...|++++.++....
T Consensus 59 g~i~~~~~~~A~~~g-------a~~~~~~~~Gst~a~~~~l~al~~~gd~Vlv~~~~h~s~~~~~~~~g~~~~~v~~~~~ 131 (294)
T cd00615 59 GPIKEAQELAARAFG-------AKHTFFLVNGTSSSNKAVILAVCGPGDKILIDRNCHKSVINGLVLSGAVPVYLKPERN 131 (294)
T ss_pred hHHHHHHHHHHHHhC-------CCCEEEEcCcHHHHHHHHHHHcCCCCCEEEEeCCchHHHHHHHHHCCCEEEEecCccC
Confidence 347889999999983 2345556999999999999999999999999999999999999999999988876443
Q ss_pred CC----CCCChhHHHhhcC--CCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCc-ccCCCCccccc
Q 014936 157 KG----WEVDLDDIESLAD--QNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHL-VFGDKPFVPMG 229 (415)
Q Consensus 157 ~~----~~~~~~~l~~~~~--~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~-~~~~~~~~~~~ 229 (415)
.+ ..+|++.++++++ ++++++++++| |++|.+++ +++|+++|+++|+++|+||+|+.. .+.+.......
T Consensus 132 ~~~~~~~~i~~~~l~~~l~~~~~~k~v~l~~p-~~~G~~~d---l~~I~~~~~~~g~~livDeA~~~~~~~~~~~~~~~~ 207 (294)
T cd00615 132 PYYGIAGGIPPETFKKALIEHPDAKAAVITNP-TYYGICYN---LRKIVEEAHHRGLPVLVDEAHGAHFRFHPILPSSAA 207 (294)
T ss_pred cccCcCCCCCHHHHHHHHHhCCCceEEEEECC-CCCCEecC---HHHHHHHHHhcCCeEEEECcchhhhccCcccCcchh
Confidence 32 3689999999885 46789999999 68999965 788999999999999999999743 34332222221
Q ss_pred ccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhh--ccccCCchhHHHHHHHHhhCCCcHHHHHH
Q 014936 230 VFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKY--FDILGDPATFIQAAVPSILQQPDEVFFKK 307 (415)
Q Consensus 230 ~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~a~~~~l~~~~~~~~~~ 307 (415)
. .+..+++.|++|+ ++|++.|+++..+.. .. ...++... ...+.+++.....++..++... ..+-++
T Consensus 208 ~---~~~div~~S~hK~--l~g~~~~~~l~~~~~-~~----~~~~~~~~~~~~~ttsps~~~~asl~~a~~~~-~~~g~~ 276 (294)
T cd00615 208 M---AGADIVVQSTHKT--LPALTQGSMIHVKGD-LV----NPDRVNEALNLHQSTSPSYLILASLDVARAMM-ALEGKE 276 (294)
T ss_pred h---cCCcEEEEchhcc--cchHhHHHHHHhCCC-cC----CHHHHHHHHHHHCCCCcHHHHHHHHHHHHHHH-HHHhHH
Confidence 1 2345899999998 477776555433221 11 11222222 1123456665655555555321 122234
Q ss_pred HHHHHHHHHHHHHHHhh
Q 014936 308 TLNLLKQSVDICYNKIK 324 (415)
Q Consensus 308 ~~~~~~~~~~~l~~~l~ 324 (415)
..+++.++.+.+++.|+
T Consensus 277 ~~~~~~~~~~~~r~~l~ 293 (294)
T cd00615 277 LVEELIELALYARQEIN 293 (294)
T ss_pred HHHHHHHHHHHHHHHHh
Confidence 45556666666666554
No 270
>PRK06541 hypothetical protein; Provisional
Probab=99.86 E-value=8.9e-19 Score=167.55 Aligned_cols=356 Identities=16% Similarity=0.111 Sum_probs=218.7
Q ss_pred ccCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHH
Q 014936 32 KNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQ 111 (415)
Q Consensus 32 ~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~ 111 (415)
.+++.++|+..|.-.... --.+|.+.+++++++....+. .......+.+..+|+.+.+..+ ...+.++++++|++
T Consensus 49 ~dG~~ylD~~~g~~~~~l-Gh~~p~v~~Av~~q~~~~~~~--~~~~~~~~~~~~la~~l~~~~p--~~~~~v~f~~sGse 123 (460)
T PRK06541 49 DRGKRYLDGLAGLFVVQV-GHGRAELAEAAAKQAGTLAFF--PLWSYAHPPAIELAERLAALAP--GDLNRVFFTTGGSE 123 (460)
T ss_pred CCCCEEEECCccHHhccC-CCCCHHHHHHHHHHHhhCcCc--cccccCCHHHHHHHHHHHHhCC--CCcCEEEEcCCcHH
Confidence 358889999887422111 124799999999998753221 1101112344445555543222 12368999999999
Q ss_pred HHHHHHHHhcC-------C-CCEEEEcCCCCcchHHHHHhC-CC------------eEEEeeccCCCC---CCCC-----
Q 014936 112 AIDVAMALLSR-------P-GANILLPRPGFPIYELSAAFR-HI------------EVRHFDLLPDKG---WEVD----- 162 (415)
Q Consensus 112 al~~~~~~l~~-------~-gd~vi~~~p~y~~~~~~~~~~-g~------------~~~~~~~~~~~~---~~~~----- 162 (415)
|++.+++.... + ..+|+...-+|++....+... |. .+..++...... +.-+
T Consensus 124 Ave~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 203 (460)
T PRK06541 124 AVESAWKLAKQYFKLTGKPGKHKVISRAIAYHGTTQGALAITGLPAFKAPFEPLVPGGFRVPNTNFYRAPELGDDPEAFG 203 (460)
T ss_pred HHHHHHHHHHHHHHhcCCCCccEEEEEcCcccCcchhhhcCcCChhhccccCCCCCCcEEeCCCccccccccCCCHHHHH
Confidence 99999987541 1 267899999998866544322 11 112222110000 1111
Q ss_pred ---hhHHHhhcC---CCceEEEecCC-CCccccCC-CHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCC
Q 014936 163 ---LDDIESLAD---QNTVALVIINP-GNPCGNVY-SYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGST 234 (415)
Q Consensus 163 ---~~~l~~~~~---~~~~~v~i~~p-~nptG~~~-~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~ 234 (415)
++.+++.++ +...+.+++.| +++.|.+. |.+.+++|.++|+++|+++|+||++.++...|... ....++..
T Consensus 204 ~~~~~~l~~~l~~~~~~~~Aavi~EPv~g~~G~~~~~~~yl~~l~~lc~~~g~llI~DEV~tGfGR~G~~~-a~~~~gv~ 282 (460)
T PRK06541 204 RWAADRIEEAIEFEGPDTVAAVFLEPVQNAGGCFPPPPGYFERVREICDRYDVLLVSDEVICAFGRLGEMF-GCERFGYV 282 (460)
T ss_pred HHHHHHHHHHHHhcCCCCEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCchhh-hhhhcCCC
Confidence 356776664 34567788888 78899875 58889999999999999999999997765444322 12223322
Q ss_pred CCeEEEccCccccCCCCc-eEEEEEeeCCCCCCChHHHHHHHHhh-----ccccCCchhHHHHHHHHhhCCCcHHHHHHH
Q 014936 235 VPILTLGSLSKRWIVPGW-RLGWFVTTDPCGMFRKPKVVERMKKY-----FDILGDPATFIQAAVPSILQQPDEVFFKKT 308 (415)
Q Consensus 235 ~~~i~~~s~sK~~~~~G~-r~G~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~ 308 (415)
+.++ +++|.++ .|+ ++|++++++ ++.+.+... ...+...++++.+++.+.|+... -+..
T Consensus 283 PDiv---t~gK~l~-~G~~pigav~~~~--------~i~~~~~~~~~~~~~~~T~~gnp~~~aaala~l~~l~---~~~~ 347 (460)
T PRK06541 283 PDII---TCAKGIT-SGYSPLGAMIASD--------RLFEPFLDGPTMFLHGYTFGGHPVSAAVALANLDIFE---REGL 347 (460)
T ss_pred CCEE---Eeccccc-CCccceeEEEEcH--------HHHHHhhcCCCccccCCCCCCCHHHHHHHHHHHHHHH---hccH
Confidence 2333 5899965 776 999999975 566666432 11255678888888888876421 2245
Q ss_pred HHHHHHHHHHHHHHhhcCCCCcCC-CCCCCceEEEEecCcccc--CCCCC------HHHHHHHHHhhcCeEEEcCCCCCC
Q 014936 309 LNLLKQSVDICYNKIKEIPCISCP-HKPEGSMAVMLKLNLSLL--DDIID------DIDFCFKLAKEESVIILPGTAVGL 379 (415)
Q Consensus 309 ~~~~~~~~~~l~~~l~~~~~~~~~-~~p~~g~~~~~~l~~~~~--~~~~~------~~~~~~~ll~~~gi~v~~g~~~~~ 379 (415)
.++++++.+++.+.|+++....++ .....|.++-+.+..... ..... ....+...+.++||.+.+.. .+
T Consensus 348 ~~~~~~~g~~l~~~L~~l~~~~~v~~vrg~Gl~~~ie~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~-~g- 425 (460)
T PRK06541 348 LDHVRDNEPAFRATLEKLLDLPIVGDVRGDGYFYGIELVKDKATKETFTDDESERLLRGFLSPALFEAGLYCRADD-RG- 425 (460)
T ss_pred HHHHHHHHHHHHHHHHHhhcCCCeEEEEecceEEEEEEecCcccccCCcchhhhhhHHHHHHHHHHhCCeEEEecC-CC-
Confidence 677778888888888765222211 123456676666632110 00000 01123334456799998732 11
Q ss_pred CCeEEEEee--CChhhHHHHHHHHHHHHHHHHH
Q 014936 380 KNWLRVTFA--VDPYSLEECLDRIKSFYQRHAK 410 (415)
Q Consensus 380 ~~~iRi~~~--~~~~~l~~~l~~l~~~~~~~~~ 410 (415)
...+|+++. .+++++++++++|.+++++.-.
T Consensus 426 ~~~lrl~Ppl~~t~~~id~~~~~l~~~l~~~~~ 458 (460)
T PRK06541 426 DPVVQLAPPLISGQEEFDEIEQILRSVLTEAWA 458 (460)
T ss_pred CCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 367999995 7999999999999999976543
No 271
>COG0626 MetC Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=99.86 E-value=1.7e-18 Score=158.32 Aligned_cols=286 Identities=17% Similarity=0.136 Sum_probs=202.4
Q ss_pred CCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHH----HhCCCe
Q 014936 72 GYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSA----AFRHIE 147 (415)
Q Consensus 72 ~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~----~~~g~~ 147 (415)
++++ +....|++.++++- ..+..+.+++|.+|+..++.+++++||+|+++...|.+....+ +..|++
T Consensus 59 R~~n-PT~~~lE~~~a~LE--------g~~~~~afsSGmaAI~~~~l~ll~~GD~vl~~~~~YG~t~~~~~~~l~~~gi~ 129 (396)
T COG0626 59 RTGN-PTRDALEEALAELE--------GGEDAFAFSSGMAAISTALLALLKAGDHVLLPDDLYGGTYRLFEKILQKFGVE 129 (396)
T ss_pred cCCC-ccHHHHHHHHHHhh--------CCCcEEEecCcHHHHHHHHHHhcCCCCEEEecCCccchHHHHHHHHHHhcCeE
Confidence 3443 45678888888875 5778999999999999999999999999999999998766544 567888
Q ss_pred EEEeeccCCCCCCCChhHHHhhcC-CCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcc
Q 014936 148 VRHFDLLPDKGWEVDLDDIESLAD-QNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFV 226 (415)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~ 226 (415)
+..++. -+.+.+++++. +++++|++-.|.||+-.+ .|+.+|+++|+++|+.+|+|+.++...+- .
T Consensus 130 ~~~~d~-------~~~~~~~~~~~~~~tk~v~lEtPsNP~l~v---~DI~~i~~~A~~~g~~vvVDNTfatP~~q----~ 195 (396)
T COG0626 130 VTFVDP-------GDDEALEAAIKEPNTKLVFLETPSNPLLEV---PDIPAIARLAKAYGALVVVDNTFATPVLQ----R 195 (396)
T ss_pred EEEECC-------CChHHHHHHhcccCceEEEEeCCCCccccc---ccHHHHHHHHHhcCCEEEEECCccccccc----C
Confidence 887642 24556666666 599999999999999777 77999999999999999999999864422 1
Q ss_pred cccccCCCCCeEEEccCccccCCCCceEEEEEe-eCCCCCCChHHHHHHHHhh-c-cccCCchhHHHHHHHHhhCCCcHH
Q 014936 227 PMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVT-TDPCGMFRKPKVVERMKKY-F-DILGDPATFIQAAVPSILQQPDEV 303 (415)
Q Consensus 227 ~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~-~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~a~~~~l~~~~~~ 303 (415)
+ ..++.+ |++.|.+|.++..+-=+|.++. ++ .++.+.+... . ......+|...+.+.+-|+.
T Consensus 196 P-L~~GaD---IVvhSaTKyl~GHsDvl~G~v~~~~-------~~~~~~~~~~~~~~~G~~l~p~dA~l~lRGlkT---- 260 (396)
T COG0626 196 P-LELGAD---IVVHSATKYLGGHSDVLGGVVLTPN-------EELYELLFFAQRANTGAVLSPFDAWLLLRGLRT---- 260 (396)
T ss_pred h-hhcCCC---EEEEeccccccCCcceeeeEEecCh-------HHHHHHHHHHHHhhcCCCCCHHHHHHHHhccch----
Confidence 2 223443 9999999998776555555444 43 2455554222 2 34566788888888777776
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCC----------------CceEEEEecCccccCCCCCHHHHHHHHHhh-
Q 014936 304 FFKKTLNLLKQSVDICYNKIKEIPCISCPHKPE----------------GSMAVMLKLNLSLLDDIIDDIDFCFKLAKE- 366 (415)
Q Consensus 304 ~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~----------------~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~- 366 (415)
+.-+.++..+++..+.+.|++.|.+.-+.+|. .|-.+.+++.. + +.+..++..
T Consensus 261 -L~~Rm~~~~~nA~~IA~~L~~~p~V~~V~yPgl~shp~he~~~rq~~g~gg~~Sf~l~~--------~-~~~~~f~~~L 330 (396)
T COG0626 261 -LALRMERHNENALKIAEFLADHPKVKKVYYPGLPSHPGHELAKRQMTGYGGLFSFELKN--------E-EAAKKFLDSL 330 (396)
T ss_pred -HHHHHHHHHHHHHHHHHHHhcCCCeEEEECCCCCCCCcHHHHHHhcCCCceEEEEEeCC--------h-HHHHHHHHhC
Confidence 77888899999999999999888877666774 44455566653 1 223333333
Q ss_pred --cCeEEEcCCCCCC-----------------------CCeEEEEeeCChhhHHHHHHHHHHHHHH
Q 014936 367 --ESVIILPGTAVGL-----------------------KNWLRVTFAVDPYSLEECLDRIKSFYQR 407 (415)
Q Consensus 367 --~gi~v~~g~~~~~-----------------------~~~iRi~~~~~~~~l~~~l~~l~~~~~~ 407 (415)
..+..+-|..... ++-||+|++. |+++.+++.|++++++
T Consensus 331 ~l~~~a~SlGgveSLi~~pa~~th~~~~~~~r~~~Gi~~~LvRlSVGl--Ed~eDLi~Dl~~Al~~ 394 (396)
T COG0626 331 KLFKLAESLGGVESLISHPATMTHASIPLEERAKAGITDGLVRLSVGL--EDVEDLIADLEQALAK 394 (396)
T ss_pred CccEEeccCCCcccccccccccCcccCCHhHHHhcCCCCCeEEEEecC--CCHHHHHHHHHHHHHh
Confidence 3333344432110 4679999986 3555566666666654
No 272
>KOG1368 consensus Threonine aldolase [Amino acid transport and metabolism]
Probab=99.86 E-value=3.1e-19 Score=151.14 Aligned_cols=326 Identities=17% Similarity=0.219 Sum_probs=216.7
Q ss_pred CcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHH
Q 014936 34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAI 113 (415)
Q Consensus 34 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al 113 (415)
-.+.+||.+... .-|..++++++.++-..++ .|+......+|++.+|+.++ +...+++++|+. ++
T Consensus 20 ~~~~vDLRSDTv-----T~PTdeMr~am~eA~vgDd--VyGeD~tt~rLE~~vA~l~G-------KEAgLFv~SGTm-gN 84 (384)
T KOG1368|consen 20 THRSVDLRSDTV-----TVPTDEMRRAMAEASVGDD--VYGEDPTTNRLEQRVAELFG-------KEAGLFVPSGTM-GN 84 (384)
T ss_pred eeeccccccccc-----cCChHHHHHHHhhcccCcc--cccCCccHHHHHHHHHHHhC-------ccceeeeccccc-cc
Confidence 345678877763 3356889999988876655 45555566899999999983 333455555554 44
Q ss_pred HHHHHH-hcCCCCEEEEcCCCCcchHH---HHHhCCCeEEEeeccCCCCCCCChhHHHhhcCC--------CceEEEecC
Q 014936 114 DVAMAL-LSRPGANILLPRPGFPIYEL---SAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ--------NTVALVIIN 181 (415)
Q Consensus 114 ~~~~~~-l~~~gd~vi~~~p~y~~~~~---~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~--------~~~~v~i~~ 181 (415)
.++++. +-++|.+||+.+-+|--..+ .....|+.+..+. ++++..+++++++.+++. -|++|.+-|
T Consensus 85 llaIm~Hc~~rg~eii~gd~~HI~~~E~gg~s~l~gv~~~tv~--~e~dgtm~ledIe~~ir~~~GD~H~p~T~LIclEN 162 (384)
T KOG1368|consen 85 LLAIMVHCHQRGSEIIVGDRAHIHRYEQGGISQLAGVHVRTVK--NENDGTMDLEDIEAAIRVPKGDCHMPPTKLICLEN 162 (384)
T ss_pred HHHHHHHhcCCCceEEeccchheeehhccChhhhccceeEeee--eCCCCeeeHHHHHHhhcCCCCCccCCCceEEEeec
Confidence 555555 55799999999988853332 2345566666664 445667999999998862 468899999
Q ss_pred CCCccc-cCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEee
Q 014936 182 PGNPCG-NVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTT 260 (415)
Q Consensus 182 p~nptG-~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~ 260 (415)
.+|-+| .++|.+++.++.+||+++|+.++.|.+..+-.-...+ .++..+...-..|.+ .+||.+++| +|-+++.
T Consensus 163 T~~~~Gg~vlPle~~~~v~~lak~~glkLH~DGARi~NAavasg-V~vk~i~~~fDSVsi-CLSKglgAP---VGSViVG 237 (384)
T KOG1368|consen 163 THNNCGGKVLPLEELDRVKALAKRHGLKLHMDGARIFNAAVASG-VPVKKICSAFDSVSI-CLSKGLGAP---VGSVIVG 237 (384)
T ss_pred cccccCceEeeHHHHHHHHHHHhccCCeeecchhhhhhHHHHcC-CCHHHHHHhhhhhhh-hhhccCCCC---cccEEEc
Confidence 976565 9999999999999999999999999997654322111 122222111111333 579997665 6877765
Q ss_pred CCCCCCChHHHHHHHHhhc-cccCCc--hhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCC-C
Q 014936 261 DPCGMFRKPKVVERMKKYF-DILGDP--ATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKP-E 336 (415)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~-~~~~~~--~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p-~ 336 (415)
+ .+++++.+.++ ...++. +.+..+|+..+|.+ .+. ..+.-.+++..+.+.++..+++. +..| .
T Consensus 238 ~-------k~FI~kA~~~RKalGGGmRQsGvLaaaaLval~~----~~~-~L~~dHk~A~~lAe~~~~~~~i~-v~v~a~ 304 (384)
T KOG1368|consen 238 S-------KDFIDKARHFRKALGGGMRQSGVLAAAALVALDE----NVP-LLRADHKRAKELAEYINTPEEIR-VEVPAV 304 (384)
T ss_pred c-------HHHHHHHHHHHHHhcCchhHHHHHHHHHHHHhhc----chH-HHHHHHHHHHHHHHHhcccccee-eecchh
Confidence 4 25777766653 333332 33333344444432 223 34445566777788888776677 4455 6
Q ss_pred CceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEe--eCChhhHHHHHHHHHH
Q 014936 337 GSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTF--AVDPYSLEECLDRIKS 403 (415)
Q Consensus 337 ~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~--~~~~~~l~~~l~~l~~ 403 (415)
..+++.+.+...++ +..+++..+ +++||.+.+|.. ..+|+.+ ..++++++..+..+.+
T Consensus 305 etNiv~~~l~q~~~----~~~~l~~~~-~k~gi~lm~~~s----~r~Rivlh~Qvt~~~ve~~~~~~~k 364 (384)
T KOG1368|consen 305 ETNIVNMVLCQARL----TAEELCKFL-EKNGILLMGGAS----RRIRIVLHHQVTDEDVEYVKSVLSK 364 (384)
T ss_pred hcceeeeecccccC----CHHHHHHHH-HHCCeEEeeccc----cceEEEEEEecCHHHHHHHHHHHHH
Confidence 67788876754432 567777665 778999998764 4589999 4789999999998853
No 273
>PRK11522 putrescine--2-oxoglutarate aminotransferase; Provisional
Probab=99.86 E-value=8.2e-19 Score=167.38 Aligned_cols=350 Identities=16% Similarity=0.135 Sum_probs=216.3
Q ss_pred cCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHH
Q 014936 33 NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQA 112 (415)
Q Consensus 33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~a 112 (415)
+|+.++|+..|.-.... --.+|.+.+++.+++...... .. ....+.+..+|+.+.+..+ -..+.++++++|++|
T Consensus 80 dG~~ylD~~~g~~~~~l-GH~~p~v~~Ai~~ql~~l~~~--~~-~~~~~~~~~lae~L~~~~p--~~~~~v~f~~SGsEA 153 (459)
T PRK11522 80 QGQEFIDCLGGFGIFNV-GHRNPVVVSAVQNQLAKQPLH--SQ-ELLDPLRAMLAKTLAALTP--GKLKYSFFCNSGTES 153 (459)
T ss_pred CCCEEEECCcCHHhhhc-CCCCHHHHHHHHHHHhhCccc--cc-ccCCHHHHHHHHHHHHhCC--CCCCEEEEeCCchHH
Confidence 47789999777321111 124799999999998753221 11 1123444555555543222 123689999999999
Q ss_pred HHHHHHHhc----CCC-CEEEEcCCCCcchHHHHHhCCCeE-EE---eeccCCCC--CCCChhHHHhhcCC-----CceE
Q 014936 113 IDVAMALLS----RPG-ANILLPRPGFPIYELSAAFRHIEV-RH---FDLLPDKG--WEVDLDDIESLADQ-----NTVA 176 (415)
Q Consensus 113 l~~~~~~l~----~~g-d~vi~~~p~y~~~~~~~~~~g~~~-~~---~~~~~~~~--~~~~~~~l~~~~~~-----~~~~ 176 (415)
++.+++... ++| ..|+....+|++....+....... .. .+..+.-. .-.|.+.+++.++. ...+
T Consensus 154 ve~AlklAr~~t~~~gr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~iA 233 (459)
T PRK11522 154 VEAALKLAKAYQSPRGKFTFIATSGAFHGKSLGALSATAKSTFRKPFMPLLPGFRHVPFGNIEAMRTALSECKKTGDDVA 233 (459)
T ss_pred HHHHHHHHHHHhccCCCcEEEEecCCCCCCcHHHhhhcCCcccccCCCCCCCCCcccCCCCHHHHHHHHHHhhccCCcEE
Confidence 999998764 123 368888999998765543322111 10 11100000 01267777776642 3345
Q ss_pred EEecCC-CCccccC-CCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCC-ce
Q 014936 177 LVIINP-GNPCGNV-YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPG-WR 253 (415)
Q Consensus 177 v~i~~p-~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G-~r 253 (415)
.+++.| ....|.+ .|.+.++++.++|++||+++|+||++.++...|... ....++..+.++ +++|.++ .| ++
T Consensus 234 avIvEpv~g~~G~~~pp~~yl~~lr~lc~~~g~llI~DEV~tG~GRtG~~~-a~e~~gv~PDiv---t~gK~lg-gG~~P 308 (459)
T PRK11522 234 AVILEPIQGEGGVILPPEGYLTAVRKLCDEFGALLILDEVQTGMGRTGKMF-ACEHENVQPDIL---CLAKALG-GGVMP 308 (459)
T ss_pred EEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEeccceecCCccchhh-hhhccCCCCCEE---Eechhhh-CCCcc
Confidence 667777 5556775 577889999999999999999999998765555421 222233222233 7799954 56 68
Q ss_pred EEEEEeeCCCCCCChHHHHHHHHhh---ccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhc----C
Q 014936 254 LGWFVTTDPCGMFRKPKVVERMKKY---FDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKE----I 326 (415)
Q Consensus 254 ~G~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~----~ 326 (415)
+|.+++.+ ++.+.+... ...++..+|++.+++.+.|+...++ +..++++++-+++.+.|++ .
T Consensus 309 igav~~~~--------~i~~~~~~~~~~~~~T~~gnp~~~Aaala~L~~i~~~---~l~~~~~~~g~~l~~~L~~l~~~~ 377 (459)
T PRK11522 309 IGATIATE--------EVFSVLFDNPFLHTTTFGGNPLACAAALATINVLLEQ---NLPAQAEQKGDYLLDGFRQLAREY 377 (459)
T ss_pred ceeEEEcH--------HHHHHhccCCcccCCCCCCCHHHHHHHHHHHHHHhcc---hHHHHHHHHHHHHHHHHHHHHHhC
Confidence 99999865 566655321 2234566888888888888653222 3445566666666666654 3
Q ss_pred CCCcCCCCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEe--eCChhhHHHHHHHHHHH
Q 014936 327 PCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTF--AVDPYSLEECLDRIKSF 404 (415)
Q Consensus 327 ~~~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~--~~~~~~l~~~l~~l~~~ 404 (415)
|.+. ......|.++.+.+... .....+...+ .++||.+.+... ....+|+.+ ..+++++++++++|.++
T Consensus 378 ~~~i-~~VrG~Gl~~giel~~~-----~~~~~i~~~l-~~~Gvl~~~~~~--~~~~lr~~Ppl~~t~~~id~~l~~l~~~ 448 (459)
T PRK11522 378 PDLV-QEARGKGMLMAIEFVDN-----EIGYNFASEM-FRQRVLVAGTLN--NAKTIRIEPPLTLTIEQCEQVLKAARKA 448 (459)
T ss_pred CCce-eeEEeceeEEEEEecCc-----hHHHHHHHHH-HHCCeEEEecCC--CCCEEEEECCccCCHHHHHHHHHHHHHH
Confidence 3211 11234577777777531 1134455555 567999976421 246899988 47899999999999999
Q ss_pred HHHHHHHhh
Q 014936 405 YQRHAKQLQ 413 (415)
Q Consensus 405 ~~~~~~~~~ 413 (415)
+++..+.++
T Consensus 449 l~~~~~~~~ 457 (459)
T PRK11522 449 LAAMRVSVE 457 (459)
T ss_pred HHHHHHhhc
Confidence 988776553
No 274
>cd00611 PSAT_like Phosphoserine aminotransferase (PSAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major group in this CD corresponds to phosphoserine aminotransferase (PSAT). PSAT is active as a dimer and catalyzes the conversion of phosphohydroxypyruvate to phosphoserine.
Probab=99.86 E-value=1.7e-19 Score=168.04 Aligned_cols=311 Identities=14% Similarity=0.081 Sum_probs=204.2
Q ss_pred CCCcHHHHHHHHHHHhcC-C--CCCCCCC-------CCcHHHHHHHHHHHhhhCCCCC-CCCcEEEeCC-hHHHHHHHHH
Q 014936 51 FHTTHVATEAVAEALLSE-K--FNGYAPT-------AGLPLTRRAIAEYLSRDLPYKL-TPNDVFVTSG-CTQAIDVAMA 118 (415)
Q Consensus 51 ~~~~~~~~~a~~~~~~~~-~--~~~y~~~-------~g~~~lr~~ia~~~~~~~~~~~-~~~~i~i~~g-~~~al~~~~~ 118 (415)
...++.+++++.+.+... . -..|... .-+.+.|+.++++++ . +++++++|+| +|+++++++.
T Consensus 8 ~~~p~~V~~a~~~~~~~~~~~~rg~~~~~~r~~~~~~~~~~~r~~l~~l~~------~~~~~~vvf~~gs~T~a~~~~~~ 81 (355)
T cd00611 8 AALPEEVLEQAQKELLDFNGLGMSVMEMSHRSKDFEAIVNEAESDLRELLN------IPDNYKVLFLQGGATGQFAAVPL 81 (355)
T ss_pred CCCCHHHHHHHHHHHhhcccCCccccccCCCCHHHHHHHHHHHHHHHHHhC------CCCCceEEEEcCCchHHHHHHHH
Confidence 567899999999887421 0 0111111 235677888888873 3 4578999988 9999999999
Q ss_pred HhcC---CCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCC-hhHHHhhcCCCceEEEecCCCCccccCCCHHH
Q 014936 119 LLSR---PGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVD-LDDIESLADQNTVALVIINPGNPCGNVYSYQH 194 (415)
Q Consensus 119 ~l~~---~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~ 194 (415)
.+.. +||.|++ .+......+.++..|+++..++.+.+.++ .+ .+..+..+++++++|.+++..|.||..++
T Consensus 82 ~l~~~~~~~~~i~~-g~~~~~~~~~a~~~g~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~lV~~~h~~t~tG~~~~--- 156 (355)
T cd00611 82 NLLGDKGTADYVVT-GAWSAKAAKEAKRYGGVVVIVAAKEEGKY-TKIPDVETWDLAPDAAYVHYCSNETIHGVEFD--- 156 (355)
T ss_pred hcCCCCCeEEEEEC-CHHHHHHHHHHHhcCCCcEEEecccccCC-CCCCCHhhcCCCCCCCEEEEeCCcccccEEcc---
Confidence 9987 5556654 22222334477888999998887432222 13 33333445678999999999999999843
Q ss_pred HHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHHH
Q 014936 195 LQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVER 274 (415)
Q Consensus 195 l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~ 274 (415)
++++.+|+++++|.+++. |..+..+..++ +.+.|.+|.||.+| +|++++++ ++.++
T Consensus 157 -----~i~~~~g~~~~VDa~qs~----g~~~idv~~~~-----~~~ss~~K~lGP~G--~g~l~~~~--------~~~~~ 212 (355)
T cd00611 157 -----EVPDTGGVPLVADMSSNI----LSRPIDVSKFG-----VIYAGAQKNLGPAG--VTVVIVRK--------DLLGK 212 (355)
T ss_pred -----eecccCCCeEEEEccccc----cCCCCCHHHhC-----EEEeecccccCCCc--eEEEEECH--------HHHhh
Confidence 233458999999999997 33334444433 45566899988777 88888865 22222
Q ss_pred HHh-------------hccccCCchhHHHHHHHHhhCCCcHH-HHHHHHHHHHHHHHHHHHHhhcCCCCc-CCCCC--CC
Q 014936 275 MKK-------------YFDILGDPATFIQAAVPSILQQPDEV-FFKKTLNLLKQSVDICYNKIKEIPCIS-CPHKP--EG 337 (415)
Q Consensus 275 ~~~-------------~~~~~~~~~~~~~~a~~~~l~~~~~~-~~~~~~~~~~~~~~~l~~~l~~~~~~~-~~~~p--~~ 337 (415)
+.. .....++++.....++.++|+...+. .++.+.++.+++.+++.+.|+++||+. ....+ ..
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~Tpn~~~i~~L~aal~~l~~~gg~e~i~~~~~~l~~~l~~~l~~~~gl~~~~~~~~~rs 292 (355)
T cd00611 213 ARKITPSMLNYKTHADNNSLYNTPPTFAIYMMGLVLKWLKEQGGVEAMEKRNRQKAQLLYDTIDNSNGFYRGPVDKRARS 292 (355)
T ss_pred cccCCCCcccHHHHHhcCCCCCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCccccccCCCHHHcC
Confidence 111 11113567777778887777654445 588899999999999999999997763 11111 12
Q ss_pred ceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEee--CChhhHHHHHHHHHHH
Q 014936 338 SMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFA--VDPYSLEECLDRIKSF 404 (415)
Q Consensus 338 g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~--~~~~~l~~~l~~l~~~ 404 (415)
+..+.+.++.. ....++.. .+.+.|+.+.++.. ..+.+|+|+. ++.+|++.+++.|+++
T Consensus 293 ~~vvsf~~~~~-----~l~~~~~~-~~~r~G~~~~~~~~--~~g~vR~S~~~~nt~edi~~l~~al~~~ 353 (355)
T cd00611 293 RMNVPFRLGKE-----ELEKEFLK-EAEAAGMIGLKGHR--SVGGIRASIYNALSLEGVQALADFMKEF 353 (355)
T ss_pred ceEEEEEcCCh-----hhhHHHHH-HHHHCCCcccCCCc--ccCeEEEEccCCCCHHHHHHHHHHHHHH
Confidence 23344444421 01233333 34567998655543 3478999995 5899999999998874
No 275
>TIGR01364 serC_1 phosphoserine aminotransferase. This model represents the common form of the phosphoserine aminotransferase SerC. The phosphoserine aminotransferase of the archaeon Methanosarcina barkeri and putative phosphoserine aminotransferase of Mycobacterium tuberculosis are represented by separate models. All are members of the class V aminotransferases (pfam00266).
Probab=99.86 E-value=7.3e-19 Score=162.57 Aligned_cols=312 Identities=15% Similarity=0.092 Sum_probs=207.8
Q ss_pred CcHHHHHHHHHHHhcC---CCCCCCCC-------CCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCC-hHHHHHHHHHHhc
Q 014936 53 TTHVATEAVAEALLSE---KFNGYAPT-------AGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSG-CTQAIDVAMALLS 121 (415)
Q Consensus 53 ~~~~~~~a~~~~~~~~---~~~~y~~~-------~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g-~~~al~~~~~~l~ 121 (415)
.|..+++++.+.+... ....+... .-+.++++.+++++ +.+ +..++++++| +|.++++++..+.
T Consensus 3 ~p~~v~~~~~~~~~~~~~~~~~~~~~~hr~~~f~~~~~~~~~~l~~l~----~~~-~~~~v~~~~gsgT~a~ea~~~nl~ 77 (349)
T TIGR01364 3 LPEEVLEQAQKELLNFNGTGMSVMEISHRSKEFEAVANEAESDLRELL----NIP-DNYEVLFLQGGATGQFAAVPLNLL 77 (349)
T ss_pred CCHHHHHHHHHHHhCccCCCccccccCCCchHHHHHHHHHHHHHHHHh----CCC-CCceEEEEcCCchHHHHHHHHhcC
Confidence 4677889888887731 11122211 12233455555554 321 2346777766 9999999999999
Q ss_pred CCCCEEEEcCCCCcc--hHHHHHhCCCeEEEeeccCC--CCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHH
Q 014936 122 RPGANILLPRPGFPI--YELSAAFRHIEVRHFDLLPD--KGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQK 197 (415)
Q Consensus 122 ~~gd~vi~~~p~y~~--~~~~~~~~g~~~~~~~~~~~--~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~ 197 (415)
.+|+++++...+.++ +.+.++..|+ +..+..++. .+..++++.++ ++++++.|.+++..+.||+..+
T Consensus 78 ~~~~~~l~i~~G~fg~r~~~~a~~~g~-~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~v~~th~ETstGv~~~------ 148 (349)
T TIGR01364 78 AEGKVADYIVTGAWSKKAAKEAKKYGV-VNVVASGKEGNYTKIPDPSTWE--ISEDAAYVHYCANETIHGVEFR------ 148 (349)
T ss_pred CCCCeEEEEECCHHHHHHHHHHHHhCC-cEEEeccccCCCCCCCCHHhcC--CCCCCCEEEEcCCCCcccEecc------
Confidence 899998887766654 4567788898 766664322 22245666555 3457889999999999999865
Q ss_pred HHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHHHH--
Q 014936 198 LAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERM-- 275 (415)
Q Consensus 198 i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~-- 275 (415)
++++.+++++++|.+++. +..+..+..++ ++++|.+|.|+.+| +|+++.+++ .++++
T Consensus 149 --~l~~~~~~l~iVDavss~----g~~~id~~~~d-----~~~~ssqK~lgP~G--lg~l~~s~~--------~~~~~~~ 207 (349)
T TIGR01364 149 --ELPDVKNAPLVADMSSNI----LSRPIDVSKFG-----LIYAGAQKNIGPAG--LTVVIVRKD--------LLGRASR 207 (349)
T ss_pred --eecccCCCeEEEEccccc----cCccCCHHHcc-----EEEEecccccCCCc--eEEEEECHH--------HHhhccc
Confidence 555577999999999987 33334444332 77888899998777 888887652 22221
Q ss_pred --------H---hhccccCCchhHHHHHHHHhhCCCcHH-HHHHHHHHHHHHHHHHHHHhhcCCCCcCCCC-C--CCceE
Q 014936 276 --------K---KYFDILGDPATFIQAAVPSILQQPDEV-FFKKTLNLLKQSVDICYNKIKEIPCISCPHK-P--EGSMA 340 (415)
Q Consensus 276 --------~---~~~~~~~~~~~~~~~a~~~~l~~~~~~-~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~-p--~~g~~ 340 (415)
. ......++++.....++.++|+...+. .++.+.++.+++.+++.+.|++++++..... | ..+..
T Consensus 208 ~~~~~~~~~~~~~~~~~~~Tp~~~~i~al~~al~~l~~~gG~e~i~~r~~~l~~~l~~~l~~~~gl~~~~~~~~~rs~~v 287 (349)
T TIGR01364 208 ITPSMLNYKIHAENDSMYNTPPTFAIYVSGLVFKWLKEQGGVKAIEKRNQAKAQLLYDTIDNSNGFYRNPVDPRNRSRMN 287 (349)
T ss_pred CCCCcchHHHHHhcCCCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCCCeeccCCCHHHcCCeE
Confidence 1 111223577777778888888765455 5899999999999999999999976642311 1 12233
Q ss_pred EEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEee--CChhhHHHHHHHHHHHHHH
Q 014936 341 VMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFA--VDPYSLEECLDRIKSFYQR 407 (415)
Q Consensus 341 ~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~--~~~~~l~~~l~~l~~~~~~ 407 (415)
+.+.++.. ....++.. .+.+.|+++.+|.. ..+.+|+|+. .+.+|++.+++.|+++.++
T Consensus 288 ~sf~~~~~-----~~~~~~~~-~~~~~Gi~~~~~~~--~~g~vRvS~~~~nt~edid~l~~al~~~~~~ 348 (349)
T TIGR01364 288 VVFTLGNE-----ELEKRFLK-EAEERGLVSLKGHR--SVGGMRASIYNAMPLEGVQALVDFMKEFQKK 348 (349)
T ss_pred EEEecCCh-----hHhHHHHH-HHHHCCCcccCCcc--ccCeeEEECcCCCCHHHHHHHHHHHHHHHHh
Confidence 44444421 11234434 44668997766654 3478999994 6799999999999987664
No 276
>TIGR03372 putres_am_tran putrescine aminotransferase. Members of this family are putrescine aminotransferase, as found in Escherichia coli, Erwinia carotovora subsp. atroseptica, and closely related species. This pyridoxal phosphate enzyme, as characterized in E. coli, can act also on cadaverine and, more weakly, spermidine.
Probab=99.86 E-value=7.8e-19 Score=166.35 Aligned_cols=339 Identities=16% Similarity=0.114 Sum_probs=207.5
Q ss_pred cCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCC-CCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHH
Q 014936 33 NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKF-NGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQ 111 (415)
Q Consensus 33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~-~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~ 111 (415)
.|+.++||..|.-.... --.+|.+.+++++++..... ..|.. .+.+..+|+.+.+..+ -..+.++++++|++
T Consensus 73 dG~~ylD~~~g~~~~~l-Gh~hp~v~~Av~~ql~~l~~~~~~~~----~~~~~~lAe~L~~~~p--~~~~~v~f~~SGsE 145 (442)
T TIGR03372 73 QGNEFIDCLGGFGIFNV-GHRNPNVIAAVENQLAKQPLHSQELL----DPLRALLAKTLAALTP--GKLKYSFFCNSGTE 145 (442)
T ss_pred CCCEEEECCccHHhhhc-CCCCHHHHHHHHHHHHhCCCcccccC----CHHHHHHHHHHHHhCC--CCcCEEEEeCCchH
Confidence 47889999777311111 12479999999998875322 12222 2344445555543222 12368999999999
Q ss_pred HHHHHHHHhcC----CC-CEEEEcCCCCcchHHHHHhCCCeEE----EeeccCCCC--CCCChhHHHhhcC-----CCce
Q 014936 112 AIDVAMALLSR----PG-ANILLPRPGFPIYELSAAFRHIEVR----HFDLLPDKG--WEVDLDDIESLAD-----QNTV 175 (415)
Q Consensus 112 al~~~~~~l~~----~g-d~vi~~~p~y~~~~~~~~~~g~~~~----~~~~~~~~~--~~~~~~~l~~~~~-----~~~~ 175 (415)
|++.+++.... .| .+|+....+|++....+........ ..|..+.-. .-.|.+.+++.++ ....
T Consensus 146 A~e~AlklAr~~t~~~gr~~ii~~~~~yHG~t~~~ls~t~~~~~~~~~~p~~~~~~~~p~~d~~~~~~~l~~~~~~~~~v 225 (442)
T TIGR03372 146 SVEAALKLAKAYQSPRGKFTFIAASGAFHGKSLGALSATAKPAFRKPFMPLLPGFHHVAFGDIEAMLKALNECKKTGDDV 225 (442)
T ss_pred HHHHHHHHHHHHHhhcCCcEEEEECCCccCCCHHHhhccCCcccCCCCCCCCCCCEEeCCCCHHHHHHHHHHHhcCCCcE
Confidence 99999987542 23 5799999999987655543321110 011100000 0125666666553 1345
Q ss_pred EEEecCC-CCccccC-CCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCC-c
Q 014936 176 ALVIINP-GNPCGNV-YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPG-W 252 (415)
Q Consensus 176 ~v~i~~p-~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G-~ 252 (415)
+.++..| ....|.. .|.+.++++.++|++||+++|+||++.++...|.. .....++..+.++ +++|.++ .| +
T Consensus 226 AavIvEpv~g~gG~~~p~~~yl~~l~~lc~~~g~llI~DEV~tG~GRtG~~-~a~e~~gv~PDiv---t~gK~lg-~G~~ 300 (442)
T TIGR03372 226 AAIILEPIQGEGGVILPPEGYLPAVRALCDEFGALLILDEVQTGMGRTGKM-FACEHEGVQPDIL---CLAKALG-GGVM 300 (442)
T ss_pred EEEEEeCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeecccCCCccccc-hhhhhcCCCCCee---eehhhhc-CCcc
Confidence 6667777 4556765 57888999999999999999999999876555542 1222233222233 5899964 57 6
Q ss_pred eEEEEEeeCCCCCCChHHHHHHHHhh---ccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhc----
Q 014936 253 RLGWFVTTDPCGMFRKPKVVERMKKY---FDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKE---- 325 (415)
Q Consensus 253 r~G~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~---- 325 (415)
++|.+++++ ++.+.+... ...+++.++++.+++.+.|+...++ +..++.++.-+++.+.|++
T Consensus 301 Pigavv~~~--------~i~~~~~~~~~~~~~T~~gnp~~~Aaa~a~L~~i~~~---~l~~~~~~~G~~l~~~L~~l~~~ 369 (442)
T TIGR03372 301 PIGATIATE--------AVFSVLFDNPFLHTTTFGGNPLACAAALATINELLEK---NLPAQAAIKGDFLLDGFQQLAAE 369 (442)
T ss_pred cceEEEecH--------HHHHhhhccCccccCCCCCCHHHHHHHHHHHHHHHhc---cHHHHHHHHHHHHHHHHHHHHHh
Confidence 899999865 566666321 2234567899999888888653222 2334444445555555543
Q ss_pred CC-CCcCCCCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEee--CChhhHHHHHHHHH
Q 014936 326 IP-CISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFA--VDPYSLEECLDRIK 402 (415)
Q Consensus 326 ~~-~~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~--~~~~~l~~~l~~l~ 402 (415)
.| .+. .....|+++.+.+... .....+...+ .++||.+.+... ..+.+|+.+. .+++++++++++|.
T Consensus 370 ~~~~i~--~vRG~Gl~~giel~~~-----~~~~~i~~~l-~~~Gvl~~~~~~--~~~~lr~~Ppl~~t~~~id~~~~~l~ 439 (442)
T TIGR03372 370 YPDLII--EARGKGLLMAIEFRDN-----EIGYAFAKEL-FQQNILVAGTLN--NAKSIRIEPPLTITIEQCALVIKAAK 439 (442)
T ss_pred CCCceE--EEecceEEEEEEeCCh-----HHHHHHHHHH-HHCCcEEeecCC--CCCEEEEECCcccCHHHHHHHHHHHH
Confidence 44 222 1345678888777531 1134455555 567999875321 1368999884 79999999999998
Q ss_pred HH
Q 014936 403 SF 404 (415)
Q Consensus 403 ~~ 404 (415)
++
T Consensus 440 ~~ 441 (442)
T TIGR03372 440 DA 441 (442)
T ss_pred Hh
Confidence 75
No 277
>PRK06434 cystathionine gamma-lyase; Validated
Probab=99.85 E-value=2.6e-18 Score=159.80 Aligned_cols=280 Identities=15% Similarity=0.113 Sum_probs=184.7
Q ss_pred CCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchH----HHHHhCCCeEEEee
Q 014936 77 AGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYE----LSAAFRHIEVRHFD 152 (415)
Q Consensus 77 ~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~----~~~~~~g~~~~~~~ 152 (415)
+...+|++.++++. ..+..+++++|++|+.+++.++.++||+|+++.+.|.... ..+...|+++..++
T Consensus 64 P~~~~lE~~la~le--------g~~~av~~sSG~aAi~~al~all~~GD~Vl~~~~~yg~t~~~~~~~~~~~Gi~v~fvd 135 (384)
T PRK06434 64 PTVQAFEEKYAVLE--------NAEHALSFSSGMGAITSAILSLIKKGKRILSISDLYGQTFYFFNKVLKTLGIHVDYID 135 (384)
T ss_pred hhHHHHHHHHHHHh--------CCCcEEEeCCHHHHHHHHHHHHhCCCCEEEEecCccchHHHHHHHHHHhcCcEEEEEC
Confidence 45678888898887 3467889999999999999999999999999988777654 45667899999988
Q ss_pred ccCCCCCCCChhHHHhhcCC-CceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCccccccc
Q 014936 153 LLPDKGWEVDLDDIESLADQ-NTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVF 231 (415)
Q Consensus 153 ~~~~~~~~~~~~~l~~~~~~-~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~ 231 (415)
.++.+.+. +++ ++++|++.+|+||++.+ .++++|+++|++++ +++|.+++... .+ .++. .
T Consensus 136 ~~~~~~~~---------l~~~~tklv~~e~~snpt~~v---~Di~~I~~la~~~~--lvVD~t~~s~~-~~---~pl~-~ 196 (384)
T PRK06434 136 TDRLNSLD---------FDPSNYDLIYAESITNPTLKV---PDIKNVSSFCHEND--VIVDATFASPY-NQ---NPLD-L 196 (384)
T ss_pred CCChhhee---------ecCCCeeEEEEEcCCCCCcee---ecHHHHHHHHHHcC--eEEECCCCCcc-cC---Cchh-c
Confidence 64322222 223 68899999999999988 67888888998998 46699975321 11 1222 2
Q ss_pred CCCCCeEEEccCccccCCCC-ceEEEEEeeCCCCCCChHHHHHHHHhhc-cccCCchhHHHHHHHHhhCCCcHHHHHHHH
Q 014936 232 GSTVPILTLGSLSKRWIVPG-WRLGWFVTTDPCGMFRKPKVVERMKKYF-DILGDPATFIQAAVPSILQQPDEVFFKKTL 309 (415)
Q Consensus 232 ~~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~ 309 (415)
+.+ +++.|.+|.++.+| .=.|.+++++ +++.++++... ......++...+.+..-|+. ++.+.
T Consensus 197 gaD---ivv~S~tK~i~G~~d~~gG~vv~~~-------~~~~~~~~~~~~~~G~~~~~~~A~l~~~gL~t-----L~~R~ 261 (384)
T PRK06434 197 GAD---VVIHSATKYISGHSDVVMGVAGTNN-------KSIFNNLVERRKTLGSNPDPIQAYLALRGLKT-----LGLRM 261 (384)
T ss_pred CCC---EEEeecccccCCCCCceEEEEecCc-------HHHHHHHHHHHHhcCCCCCHHHHHHHHhCCCc-----HHHHH
Confidence 333 88889999976655 3345555533 24666665443 33344566555555555554 78888
Q ss_pred HHHHHHHHHHHHHhhcCCCCcCCCCCC----------CceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCC--
Q 014936 310 NLLKQSVDICYNKIKEIPCISCPHKPE----------GSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAV-- 377 (415)
Q Consensus 310 ~~~~~~~~~l~~~l~~~~~~~~~~~p~----------~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~-- 377 (415)
++.+++...+.+.|+..|.+..+.+|. .|..+.++++. .....+++..+ +--.+.++-|...
T Consensus 262 ~r~~~~a~~~a~~L~~~p~v~~V~yPgl~~~~~~~~g~g~~~sf~l~~-----~~~~~~f~~~l-~l~~~~~slG~~~sl 335 (384)
T PRK06434 262 EKHNKNGMELARFLRDSKKISNVYYPDTEIGKKVLRGFGGMLSFELRS-----MEDVHKFIRNL-EIPMVAASLGGVESL 335 (384)
T ss_pred HHHHHHHHHHHHHHHcCCCccEEECCChHHHHHhcCCCCceEEEEECC-----HHHHHHHHHhC-CcceEccCCCCCCee
Confidence 899999999999999988876565664 24455555641 01122333322 2122233333311
Q ss_pred --------------------CC-CCeEEEEeeCChhhHHHHHHHHHHHHH
Q 014936 378 --------------------GL-KNWLRVTFAVDPYSLEECLDRIKSFYQ 406 (415)
Q Consensus 378 --------------------~~-~~~iRi~~~~~~~~l~~~l~~l~~~~~ 406 (415)
+. ++-||+|++.. +.+.+++.|.+++.
T Consensus 336 ~~~p~~~~h~~~~~e~~~~~gi~~~liRlsvGlE--d~~dLi~dl~~Al~ 383 (384)
T PRK06434 336 ITLPVETSHSSLSPEERERLGISDNLVRFSIGIE--DIDDLIKDIENALS 383 (384)
T ss_pred eECCCccccccCCHHHHHhcCCCcCeEEEEeCcC--CHHHHHHHHHHHhc
Confidence 00 35799999874 56666777766654
No 278
>PRK05769 4-aminobutyrate aminotransferase; Provisional
Probab=99.85 E-value=6.5e-18 Score=161.08 Aligned_cols=349 Identities=18% Similarity=0.127 Sum_probs=209.8
Q ss_pred ccCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHH
Q 014936 32 KNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQ 111 (415)
Q Consensus 32 ~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~ 111 (415)
.+|+.++|+..|.-.... --.+|.+.+++++++...... ....-..+....+|+.+.+..+. -..+.++++++|++
T Consensus 51 ~dG~~ylD~~~g~~~~~l-Gh~~p~v~~Ai~~ql~~~~~~--~~~~~~~~~~~~lAe~L~~~~p~-~~~~~v~f~~SGsE 126 (441)
T PRK05769 51 VDGNVYLDFNAGIAVTNV-GHAHPKVVKAVKEQAEKFLHY--SLTDFYYEPAVELAERLVEIAPG-GFEKKVFFTNSGTE 126 (441)
T ss_pred CCCCEEEECCCchhhccc-CCCCHHHHHHHHHHHHhccCc--cCcccCCHHHHHHHHHHHHhCCC-CCCCEEEECCchHH
Confidence 347788999887532221 124688999999998753321 11101123445556655442220 01369999999999
Q ss_pred HHHHHHHHhc--CCCCEEEEcCCCCcchHHHHHhC-CC-------------eEEEeeccCCCC--CC-C--------Chh
Q 014936 112 AIDVAMALLS--RPGANILLPRPGFPIYELSAAFR-HI-------------EVRHFDLLPDKG--WE-V--------DLD 164 (415)
Q Consensus 112 al~~~~~~l~--~~gd~vi~~~p~y~~~~~~~~~~-g~-------------~~~~~~~~~~~~--~~-~--------~~~ 164 (415)
|++.+++... ....+|+....+|++....+... +. .+..++...... +. - +++
T Consensus 127 A~e~AlklAr~~tgr~~Ii~~~~~yHG~t~~~ls~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (441)
T PRK05769 127 SNEAAIKIARYHTGRKYIIAFLGAFHGRTYGSLSLTASKPVQRKGFFPLMPGVIHVPYPNPYRNPWGIENPEECGNAVLD 206 (441)
T ss_pred HHHHHHHHHHHHhCCCeEEEECCCcCCccHHHHHhcCCCcccccCCCCCCCCeEEeCCCccccccccCCchHHHHHHHHH
Confidence 9999998754 12257888899998876554332 11 112222110000 00 0 123
Q ss_pred HHHh-hc----CCCceEEEecCC-CCccccC-CCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCe
Q 014936 165 DIES-LA----DQNTVALVIINP-GNPCGNV-YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPI 237 (415)
Q Consensus 165 ~l~~-~~----~~~~~~v~i~~p-~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~ 237 (415)
.+++ .+ .....+.++..| ....|.. .+.+.+++|.++|+++|+++|.||++.++...|... ....++..+.+
T Consensus 207 ~le~~~~~~~~~~~~iaavi~Epv~g~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~tG~gr~G~~~-a~~~~gv~pDi 285 (441)
T PRK05769 207 FIEDYLFKKLVPPEEVAAIIVEPIQGEGGYVVPPKNFFKELRKLADKYGILLIDDEVQTGMGRTGKMF-AIEHFGVEPDI 285 (441)
T ss_pred HHHHHHHhhccCCCceEEEEECcccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCccccee-hhhccCCCCCE
Confidence 3554 22 234456677777 4556764 568889999999999999999999999866555422 12223322233
Q ss_pred EEEccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhhccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHH
Q 014936 238 LTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVD 317 (415)
Q Consensus 238 i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~ 317 (415)
+ +++|.++ .|+++|++++++ ++.+........+...+++++.++.+.|+...+ +..++++++.+
T Consensus 286 v---t~~K~l~-~G~p~gav~~~~--------~i~~~~~~~~~~T~~g~p~~~aaa~a~L~~l~~----~~~~~~~~~g~ 349 (441)
T PRK05769 286 I---TLAKAIA-GGLPLGAVIGRA--------ELMFLPPGSHANTFGGNPVAAAAALATLEELEE----GLLENAQKLGE 349 (441)
T ss_pred E---EEccccc-CCcccEEEEEeh--------hhhhcCCCCCCCCCCcCHHHHHHHHHHHHHHHH----HHHHHHHHHHH
Confidence 3 5789976 689999999865 444332222223456688999998888865321 45566667777
Q ss_pred HHHHHhhcC----CCCcCCCCCCCceEEEEecCcccc-CCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEee--CC
Q 014936 318 ICYNKIKEI----PCISCPHKPEGSMAVMLKLNLSLL-DDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFA--VD 390 (415)
Q Consensus 318 ~l~~~l~~~----~~~~~~~~p~~g~~~~~~l~~~~~-~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~--~~ 390 (415)
+|.+.|+++ +.+. ....-|.++-+.+..... +.......+...+ .++||.+.+.. ...+|+++. ++
T Consensus 350 ~l~~~L~~l~~~~~~~~--~vrg~G~~~~i~~~~~~~~~~~~~~~~~~~~~-~~~Gil~~~~~----~~~lr~~p~l~~t 422 (441)
T PRK05769 350 YLRKELKELKEKYEFIG--DVRGLGLMIGVELVKDRKEPDPKLRDKVLYEA-FKRGLLLLGAG----KSAIRIIPPLIIT 422 (441)
T ss_pred HHHHHHHHHHHhCCCee--eeecceEEEEEEeccCCccccHHHHHHHHHHH-HhCCcEEecCC----CCEEEEeCCCCCC
Confidence 777777643 2221 123446666666632110 0000122344444 56799987642 367999985 59
Q ss_pred hhhHHHHHHHHHHHHHHH
Q 014936 391 PYSLEECLDRIKSFYQRH 408 (415)
Q Consensus 391 ~~~l~~~l~~l~~~~~~~ 408 (415)
++++++++++|.+++.+.
T Consensus 423 ~~~id~~~~~l~~~l~~~ 440 (441)
T PRK05769 423 EEEADIGLEILEEAIKEL 440 (441)
T ss_pred HHHHHHHHHHHHHHHHHh
Confidence 999999999999998753
No 279
>PRK03080 phosphoserine aminotransferase; Provisional
Probab=99.85 E-value=4e-19 Score=166.95 Aligned_cols=323 Identities=17% Similarity=0.139 Sum_probs=203.2
Q ss_pred eEecccCCCCCCCCCCcHH-HHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCC-CCCcEEEeC-ChHHHHH
Q 014936 38 ISLAMGDPTVHSCFHTTHV-ATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKL-TPNDVFVTS-GCTQAID 114 (415)
Q Consensus 38 i~l~~g~~~~~~~~~~~~~-~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~-~~~~i~i~~-g~~~al~ 114 (415)
++|..|- ..+++. +++++.+......+....-..-+.+.|+.+++++ +. ++++|++++ |+|.+++
T Consensus 14 ~~f~~Gp------~~~~~~~v~~a~~~~~~~~~hr~~~f~~~~~~~r~~l~~l~------~~~~~~~v~~~~gs~T~~~~ 81 (378)
T PRK03080 14 PRFSSGP------CKKRPGWQLEALADALLGRSHRQKPVKALLKRVIEGTRELL------SLPEGYEVGIVPGSDTGAWE 81 (378)
T ss_pred CCcCCCC------cCCChHHHHHHHHhhhcccCcCCHHHHHHHHHHHHHHHHHh------CCCCCceEEEECCchHHHHH
Confidence 4565553 344566 9998876543211111111234567777777777 33 345788775 8999999
Q ss_pred HHHHHhcCC-CCEEEEcCCCCcc-hHH-HHHhCCC-eEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCC
Q 014936 115 VAMALLSRP-GANILLPRPGFPI-YEL-SAAFRHI-EVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVY 190 (415)
Q Consensus 115 ~~~~~l~~~-gd~vi~~~p~y~~-~~~-~~~~~g~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~ 190 (415)
+++..+.++ ++.|++ .-.|+. +.. ..+..|. ++..++.+ .+..+|+++++. ++.|.+++.+|.||...
T Consensus 82 ~~~~~l~~~~~~~vi~-~g~f~~~~~~~~~~~~g~~~v~~~~~~--~g~~~d~~~i~~-----~~~V~~~h~~t~tG~~~ 153 (378)
T PRK03080 82 MALWSLLGARRVDHLA-WESFGSKWATDVVKQLKLEDPRVLEAD--YGSLPDLSAVDF-----DRDVVFTWNGTTTGVRV 153 (378)
T ss_pred HHHHhcCCCCcceEEE-eCHHHHHHHHHHHhhcCCCCceEeccC--CCCCCCHhhcCC-----CCCEEEEecCCccceec
Confidence 999999874 445554 445544 222 2356788 88888764 334567766432 55688999999999997
Q ss_pred CHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCC-CCceEEEEEeeCCCCCCChH
Q 014936 191 SYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIV-PGWRLGWFVTTDPCGMFRKP 269 (415)
Q Consensus 191 ~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~-~G~r~G~~~~~~~~~~~~~~ 269 (415)
| +++|++ +++|+++++|.+++.+. .+..+... + +++.|.+|+++. +| +|+++.++
T Consensus 154 p---i~~I~~--~~~g~~~vVDa~qs~G~----~pidv~~i--D---~~~~s~~K~l~~P~G--~g~l~v~~-------- 209 (378)
T PRK03080 154 P---VARWIG--ADREGLTICDATSAAFA----LPLDWSKL--D---VYTFSWQKVLGGEGG--HGMAILSP-------- 209 (378)
T ss_pred c---chhhcc--ccCCCeEEEeccccccc----CCCCHHHC--c---EEEEehhhhCCCCCc--eEEEEECH--------
Confidence 7 555555 68899999999999833 33344432 2 778889998754 66 88888864
Q ss_pred HHHHHHHhh------------------------ccccCCchhHHHHHHHHhhCCCcHH-HHHHHHHHHHHHHHHHHHHhh
Q 014936 270 KVVERMKKY------------------------FDILGDPATFIQAAVPSILQQPDEV-FFKKTLNLLKQSVDICYNKIK 324 (415)
Q Consensus 270 ~~~~~~~~~------------------------~~~~~~~~~~~~~a~~~~l~~~~~~-~~~~~~~~~~~~~~~l~~~l~ 324 (415)
+..+++... .....+++.....++.++|+...+. .++.+.++.+++.+++.+.|+
T Consensus 210 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~tp~i~~i~~l~~al~~l~~~gG~e~i~~r~~~l~~~l~~~l~ 289 (378)
T PRK03080 210 RAVERLESYTPARPIPKFFRLTKGGKAIENSFKGQTINTPSMLTVEDYLDQLDWANSIGGLDALIARTAANASVLYDWAE 289 (378)
T ss_pred HHHHhhhcccCCCCCchhheeccchHHhhhhhcCCcccCchHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHH
Confidence 233322210 0011234444444445555543333 578888999999999999999
Q ss_pred cCCCCcCCCC-CC--CceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEee--CChhhHHHHHH
Q 014936 325 EIPCISCPHK-PE--GSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFA--VDPYSLEECLD 399 (415)
Q Consensus 325 ~~~~~~~~~~-p~--~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~--~~~~~l~~~l~ 399 (415)
+++++..+.. +. .+..+.+.++... . . ...++...+++ +||.+..|......+.+|+|+. ++.++++.+++
T Consensus 290 ~~~~~~~~~~~~~~~s~~i~~~~~~~~~-~-~-~~~~~~~~l~~-~~i~v~~g~~~~~~~~vRis~~~~~t~~di~~l~~ 365 (378)
T PRK03080 290 KTPWATPLVADPATRSNTSVTLDFVDAQ-A-A-VDAAAVAKLLR-ENGAVDIEPYRDAPNGLRIWCGPTVEPADVEALTP 365 (378)
T ss_pred hCCCcccccCCccccCccEEEEEcCCch-H-H-HHHHHHHHHHH-cCCeeccccccCCCCcEEEecCCCCCHHHHHHHHH
Confidence 8866653311 21 2234444554200 0 0 13345666655 4888877654323578999994 68999999999
Q ss_pred HHHHHHHHH
Q 014936 400 RIKSFYQRH 408 (415)
Q Consensus 400 ~l~~~~~~~ 408 (415)
.|++++++.
T Consensus 366 al~~~~~~~ 374 (378)
T PRK03080 366 WLDWAFERL 374 (378)
T ss_pred HHHHHHHHH
Confidence 999987654
No 280
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=99.85 E-value=2.9e-18 Score=173.86 Aligned_cols=301 Identities=11% Similarity=0.060 Sum_probs=210.3
Q ss_pred HHHHHHHHHHHhhhCCCCCCCCcEEEeCChH----HHHHHHHHHhcCC-CC----EEEEcCCCCcchHHHHHhCCCeEEE
Q 014936 80 PLTRRAIAEYLSRDLPYKLTPNDVFVTSGCT----QAIDVAMALLSRP-GA----NILLPRPGFPIYELSAAFRHIEVRH 150 (415)
Q Consensus 80 ~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~----~al~~~~~~l~~~-gd----~vi~~~p~y~~~~~~~~~~g~~~~~ 150 (415)
.++|+.+++++ | .++|.++++++ +++.++++++.++ || .|+++...|......+...|++++.
T Consensus 571 ~~~r~~la~i~----g----~~~v~f~pnaga~ge~a~~~vi~~~~~~~Gd~~r~~vli~~~aH~sn~a~a~~~G~~vv~ 642 (993)
T PLN02414 571 EDLGDLLCEIT----G----FDSFSLQPNAGAAGEYAGLMVIRAYHLSRGDHHRNVCIIPVSAHGTNPASAAMCGMKIVV 642 (993)
T ss_pred HHHHHHHHHHh----C----CCeEEEcCCCcHHHHHHHHHHHHHHHhccCCCCCCEEEeCCCcCccCHHHHHHCCCEEEE
Confidence 45666666665 3 39999999999 8999999999866 88 8999999999988888889999999
Q ss_pred eeccCCCCCCCChhHHHhhcCC---CceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCccc
Q 014936 151 FDLLPDKGWEVDLDDIESLADQ---NTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVP 227 (415)
Q Consensus 151 ~~~~~~~~~~~~~~~l~~~~~~---~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~ 227 (415)
++.+. +..+|+++|++++++ ++++|++++|+|-+|.. +++++|+++|+++|+.+++|.++..... ....
T Consensus 643 v~~d~--~G~vDle~L~~~i~~~~~~ta~V~vt~pSn~gg~e---~~I~eI~~iah~~Galv~vDgAq~~a~~---~l~~ 714 (993)
T PLN02414 643 VGTDA--KGNINIEELRKAAEAHKDNLAALMVTYPSTHGVYE---EGIDEICDIIHDNGGQVYMDGANMNAQV---GLTS 714 (993)
T ss_pred eccCC--CCCcCHHHHHHHHhccCCCeEEEEEECCCcccccc---chHHHHHHHHHHcCCEEEEEecCHHhcc---CcCC
Confidence 99853 346999999999984 67899999999999998 7799999999999999999999965221 1122
Q ss_pred ccccCCCCCeEEEccCccccC----CCCceEEEEEeeCCCCCCChHHHHHHHH------------hhccc-cCC------
Q 014936 228 MGVFGSTVPILTLGSLSKRWI----VPGWRLGWFVTTDPCGMFRKPKVVERMK------------KYFDI-LGD------ 284 (415)
Q Consensus 228 ~~~~~~~~~~i~~~s~sK~~~----~~G~r~G~~~~~~~~~~~~~~~~~~~~~------------~~~~~-~~~------ 284 (415)
...++.+ ++.+|.+|+|+ .+|..+|++.+.+. +...+- ..... .++
T Consensus 715 p~~~GaD---~~~~s~HK~f~~P~G~GGPg~G~l~~~~~--------L~p~lPg~~v~~~~~~~~r~~~s~iGt~~~a~~ 783 (993)
T PLN02414 715 PGFIGAD---VCHLNLHKTFCIPHGGGGPGMGPIGVKKH--------LAPFLPSHPVVPTGGIPRPEKTQPLGTISAAPW 783 (993)
T ss_pred ccccCCC---EEEecCCccCCcCcccCCCCeeeEEEchh--------hcccCCCCccccCCCcccccCCCCcCCccchhh
Confidence 3345554 88889999765 23556999987541 111110 00100 112
Q ss_pred chhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCce--EEEEecCccccCCCCCHHHHHHH
Q 014936 285 PATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSM--AVMLKLNLSLLDDIIDDIDFCFK 362 (415)
Q Consensus 285 ~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~--~~~~~l~~~~~~~~~~~~~~~~~ 362 (415)
.+.....++..++.....+.+.+..++...+.+++.+.|++..++. +..|.+.. -+.+.+...+-....+..++.++
T Consensus 784 g~al~l~~A~~yi~~lG~~Gl~~~a~~a~~nAnYl~~rL~~~~~~~-~~~~~~~~~hEfv~~~~~l~~~~g~~~~di~kr 862 (993)
T PLN02414 784 GSALILPISYTYIAMMGSEGLTDASKIAILNANYMAKRLEGHYPVL-FRGKNGTCAHEFIIDLRPFKNTAGIEPEDVAKR 862 (993)
T ss_pred hhHHHHHHHHHHHHHHCHhHHHHHHHHHHHHHHHHHHHHHhhCCcc-ccCCCCCeeeeEEEeccccccccCCCHHHHHHH
Confidence 1223334445555555567888889999999999999998743444 32333321 12233331110001245777777
Q ss_pred HHhhcCeEEEcCCCCCCCCeEEEEe--eCChhhHHHHHHHHHHHHHHHHH
Q 014936 363 LAKEESVIILPGTAVGLKNWLRVTF--AVDPYSLEECLDRIKSFYQRHAK 410 (415)
Q Consensus 363 ll~~~gi~v~~g~~~~~~~~iRi~~--~~~~~~l~~~l~~l~~~~~~~~~ 410 (415)
|+ ++||.... ..|...+++||++ ..++++||.+++.+..+.++...
T Consensus 863 L~-d~Gihapt-~~~pv~~~lmiepTE~~skeelDrf~~al~~i~~e~~~ 910 (993)
T PLN02414 863 LM-DYGFHAPT-MSWPVPGTLMIEPTESESKAELDRFCDALISIREEIAD 910 (993)
T ss_pred HH-HcCcEEee-eccccCCEEEEEeeeeCCHHHHHHHHHHHHHHHHHHHH
Confidence 76 78997543 3244478999999 47899999999999988877654
No 281
>PF04864 Alliinase_C: Allinase; InterPro: IPR006948 Allicin is a thiosulphinate that gives rise to dithiines, allyl sulphides and ajoenes, the three groups of active compounds in Allium species. Allicin is synthesised from sulphoxide cysteine derivatives by alliinase, whose C-S lyase activity cleaves C(beta)-S(gamma) bonds. It is thought that this enzyme forms part of a primitive plant defence system [].; GO: 0016846 carbon-sulfur lyase activity; PDB: 1LK9_B 2HOX_C 2HOR_A 3BWO_D 3BWN_B.
Probab=99.85 E-value=2.6e-20 Score=162.27 Aligned_cols=290 Identities=18% Similarity=0.204 Sum_probs=185.8
Q ss_pred CcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCC------CCEEEEcCCCCcchHHHHHhCCCeEEEe
Q 014936 78 GLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRP------GANILLPRPGFPIYELSAAFRHIEVRHF 151 (415)
Q Consensus 78 g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~------gd~vi~~~p~y~~~~~~~~~~g~~~~~~ 151 (415)
-.++|.+.|.+.....-+..++...|++.+|+|+.+++++.+|... --.|+...|.|+.|......+.-....+
T Consensus 44 ~s~eL~~~Ir~LH~~VGNAvt~gr~IV~GtGsTQL~~AalyALSp~~~~~~~p~~VVa~aPYY~~Y~~qt~~f~s~~y~w 123 (363)
T PF04864_consen 44 ISPELERQIRRLHRVVGNAVTDGRYIVFGTGSTQLFNAALYALSPNASPSSSPASVVAAAPYYSSYPEQTDFFDSRLYKW 123 (363)
T ss_dssp S-HHHHHHHHHHHHHH-SB--TTSEEEEECHHHHHHHHHHHHHCHHT-TTSSSEEEEE-SS--CHHHHHCCCT-BTTEEE
T ss_pred ccHHHHHHHHHHHHHhccccccCcEEEEcCCHHHHHHHHHHhcCCCCCCCCCCceeEecCCCccchHHHHHhccccCccc
Confidence 3578999998887654454556678999999999999999999632 1489999999999988775554433333
Q ss_pred eccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCccccccc
Q 014936 152 DLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVF 231 (415)
Q Consensus 152 ~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~ 231 (415)
.-+ ...+...-.+.+-.=++++||||-|.+ .+.++ +..+..+|.|-+|.+-.|+ ++..-
T Consensus 124 ~Gd--------a~~~~~~~~~~~~IElVTSPNNPDG~l-----r~~V~---~g~~~k~I~D~AYYWPhyT-----pI~~~ 182 (363)
T PF04864_consen 124 AGD--------ASNFKNSDNPSPYIELVTSPNNPDGQL-----REAVL---NGSSGKVIHDLAYYWPHYT-----PITAP 182 (363)
T ss_dssp EEE--------CCCGTT-S-CCGEEEEEESS-TTT-----------SS---TTTEEEEEEE-TT-STTTS--------S-
T ss_pred ccc--------HHhhccCCCCCCeEEEEeCCCCCcccc-----cchhc---CCCCcceeeeeeeeccccc-----ccCCC
Confidence 321 111111111233444899999999988 45554 3556778999999985544 22221
Q ss_pred CCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhhcc-ccCCchhHHHHHHHHhhCCCc----H----
Q 014936 232 GSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFD-ILGDPATFIQAAVPSILQQPD----E---- 302 (415)
Q Consensus 232 ~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~a~~~~l~~~~----~---- 302 (415)
.++.|.++|+||.-|.+|.|+||.++.+ .++.+++..+.. .+.+++.-+|.-++++|+... .
T Consensus 183 --aD~DiMLFT~SK~TGHAGSR~GWAlVKD-------~~Va~kM~~y~~lnTiGvS~dsQLRa~kiLk~v~~~~~~~~~~ 253 (363)
T PF04864_consen 183 --ADHDIMLFTLSKLTGHAGSRFGWALVKD-------EEVAKKMTKYMELNTIGVSRDSQLRALKILKVVLDGYGTEKGT 253 (363)
T ss_dssp --B--SEEEEEHHHHCS-GGG-EEEEEES--------HHHHHHHHHHHHHHCSS--HHHHHHHHHHHHHHHHHCCHHTTT
T ss_pred --CCCceEEEEEecccCccccccceeeecC-------HHHHHHHHHHHHHhcccCcHHHHHHHHHHHHHHHhcccCCCCc
Confidence 1223899999999899999999999976 468888877743 356778888877777765421 1
Q ss_pred -HHHHHHHHHHHHHHHHHHHHhhcCCCCcC--C----------CCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCe
Q 014936 303 -VFFKKTLNLLKQSVDICYNKIKEIPCISC--P----------HKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESV 369 (415)
Q Consensus 303 -~~~~~~~~~~~~~~~~l~~~l~~~~~~~~--~----------~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi 369 (415)
+.++--.+.++++.+.|.+.+....-+.. . .......|.|++++.. +.+-|...|++.||
T Consensus 254 ~~~F~f~~~~M~~RW~~L~~~~~~S~rFSLq~~~~~yC~ff~~~~~psPafAWlkCe~e-------ed~DC~~~l~~~~I 326 (363)
T PF04864_consen 254 EDIFHFGYSTMRERWEKLRAAVSASKRFSLQKFSPQYCNFFKRVREPSPAFAWLKCERE-------EDEDCYAVLREAKI 326 (363)
T ss_dssp TSHHHHHHHHHHHHHHHHHHHHCCSSSEEE---SCEEETTTTCEEE---SEEEEEESSC-------GGSSHHHHHHCTTE
T ss_pred cchHHHHHHHHHHHHHHHHHHHHhcCceecCcCCchhccccccccCCCCCeEEEecCCc-------ccccHHHHHHhCCc
Confidence 36677788999999999999986311110 0 0112356999999742 22346677789999
Q ss_pred EEEcCCCCCC-CCeEEEEeeCChhhHHHHHHHHHHH
Q 014936 370 IILPGTAVGL-KNWLRVTFAVDPYSLEECLDRIKSF 404 (415)
Q Consensus 370 ~v~~g~~~~~-~~~iRi~~~~~~~~l~~~l~~l~~~ 404 (415)
..+.|..|+. +.++|+|+-.++++++.++++|..+
T Consensus 327 ~tr~G~~fga~~ryVRlSml~~~d~Fd~l~~rL~~l 362 (363)
T PF04864_consen 327 ITRSGVLFGADSRYVRLSMLKRDDDFDQLLERLSKL 362 (363)
T ss_dssp EEEEGGGGTS-TTEEEEESSS-HHHHHHHHHHHHCC
T ss_pred ccCCCCccCCCCCeEEEeccCCHHHHHHHHHHHHhh
Confidence 9999999997 6899999999999999999999754
No 282
>TIGR03531 selenium_SpcS O-phosphoseryl-tRNA(Sec) selenium transferase. In the archaea and eukaryotes, the conversion of the mischarged serine to selenocysteine (Sec) on its tRNA is accomplished in two steps. This enzyme, O-phosphoseryl-tRNA(Sec) selenium transferase, acts second, after a phosphophorylation step catalyzed by a homolog of the bacterial SelA protein.
Probab=99.85 E-value=1.9e-18 Score=162.07 Aligned_cols=305 Identities=13% Similarity=0.167 Sum_probs=198.8
Q ss_pred cHHHHHHHHHHHhhhCCCCCCCCcEEEeCChH-HHHHHHHHHhcC---CCCEEEEcCCCCcchHHHHHhCCCeEEEeec-
Q 014936 79 LPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCT-QAIDVAMALLSR---PGANILLPRPGFPIYELSAAFRHIEVRHFDL- 153 (415)
Q Consensus 79 ~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~-~al~~~~~~l~~---~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~- 153 (415)
...+.+.+.+.+.+..|.. +.+..++++|+| .++.+++.++.. +||.|+++..+|.+....+...|++++.++.
T Consensus 103 ~~~l~~~~e~~~~~~~G~~-~~~~a~~v~~~Tg~al~laL~alr~~~~~gd~VI~p~~th~S~~kAi~~~G~~pv~Vd~~ 181 (444)
T TIGR03531 103 LYKLTNKLVKDFLKLLGLR-SIKSAFVVPLATGMSLSLCLSALRHKRPKAKYVIWPRIDQKSCIKAISTAGFEPRVIETV 181 (444)
T ss_pred HHHHHHHHHHHHHHHcCCC-CCCEEEEECCHHHHHHHHHHHHcCCcCCCCCEEEEECcChHHHHHHHHHcCCeEEEeeee
Confidence 3455555555555544522 124688888888 688888877752 5899999999999999999999999999985
Q ss_pred cCCCCCCCChhHHHhhcCC---CceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccc--
Q 014936 154 LPDKGWEVDLDDIESLADQ---NTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPM-- 228 (415)
Q Consensus 154 ~~~~~~~~~~~~l~~~~~~---~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~-- 228 (415)
..++.+.+|+++|++++++ +.+++++.+|+ |+.....+++++|+++|++||+++|+|++|+..... ...+
T Consensus 182 ~d~~~~~iD~e~Le~aIt~~~~kai~~Vv~Tp~--t~~~g~~ddL~eIa~la~k~gI~lIvDaAyg~~~~~---~~~~~~ 256 (444)
T TIGR03531 182 LDGDELTTDVEDIERAIEEIGPDNILCVLSTTS--CFAPRSPDDIEEIAKICANYDIPHIVNNAYGLQSNK---YMELIN 256 (444)
T ss_pred ecCcCCCcCHHHHHHHHHhccCCCEEEEEEcCC--cCCCcchhCHHHHHHHHHHcCCEEEEECcCcCcChh---hhhhhh
Confidence 2346688999999999976 44566666665 444444599999999999999999999999863211 0011
Q ss_pred cccCCCCCeEEEccCccccCCCCceEEEEE-eeCCCCCCChHHHHHHHHhhccccCCchhHHHHHHHHhhCCCcHHHHHH
Q 014936 229 GVFGSTVPILTLGSLSKRWIVPGWRLGWFV-TTDPCGMFRKPKVVERMKKYFDILGDPATFIQAAVPSILQQPDEVFFKK 307 (415)
Q Consensus 229 ~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~ 307 (415)
.......-.+++.|++|.+.++|+ |+++ +++ +++.+.+..... ....+...+.+...++. ...+.+++
T Consensus 257 ~g~~~Grad~vv~s~hK~l~~pg~--Gg~I~~~d-------~el~~~i~~~y~-g~~~~s~~~~~~~~ll~-~G~~g~~~ 325 (444)
T TIGR03531 257 KAIKVGRVDAVVSSTDKNFMVPVG--GAIIYSFD-------ENFIQEISKSYP-GRASASPSLDVLITLLS-LGSKGYLE 325 (444)
T ss_pred ccccccCCCeEEEeCccCCCCCCC--EEEEEECC-------HHHHHHHHHhcc-CCCCChHHHHHHHHHHH-hCHHHHHH
Confidence 011100013667799999888775 6655 533 357777765432 22234456666666664 34578899
Q ss_pred HHHHHHHHHHHHHHHhhcCC---CCcCCCCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeE----EEcCC-----
Q 014936 308 TLNLLKQSVDICYNKIKEIP---CISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVI----ILPGT----- 375 (415)
Q Consensus 308 ~~~~~~~~~~~l~~~l~~~~---~~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~----v~~g~----- 375 (415)
+.++..++++++.+.|+++. |-.....|....-+-+.+.... ..+... +-.+|...+|. |.||.
T Consensus 326 li~~~~~~a~~l~~~L~~l~~~~~~~~~~~~~n~is~~~~~~~~~---~~~~~~-~g~~l~~~~v~g~r~v~~~~~~~~~ 401 (444)
T TIGR03531 326 LLKERKEMYKYLKELLQKLAERHGERLLDTPENPISSAMTLSTLK---GKDPTM-LGSMLYSRRVTGPRVVTNGDSKTVG 401 (444)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhCcEeecCCCCceeEEEeccccc---ccCHHH-HHHHHHhCCCCCceeecCCCceEEC
Confidence 99999999999999988642 3332223444444444444211 112333 44455555552 34555
Q ss_pred --CC---CC------CCeEEEEe--eCChhhHHHHHHHHHHH
Q 014936 376 --AV---GL------KNWLRVTF--AVDPYSLEECLDRIKSF 404 (415)
Q Consensus 376 --~~---~~------~~~iRi~~--~~~~~~l~~~l~~l~~~ 404 (415)
.| +. ..|+-++. +.+++|++.++++|.+.
T Consensus 402 ~~~~~~~~~~~~~~~~~y~~~~~~~g~~~~~~~~~~~~l~~~ 443 (444)
T TIGR03531 402 GCEFKGYGSHTSNYPCPYITAAAAIGMTKEDVDTFVSRLEKS 443 (444)
T ss_pred CEEeecccccccCCCchhHHHHHHhCCcHHHHHHHHHHHhhc
Confidence 22 11 13565555 57899999999999865
No 283
>PRK02769 histidine decarboxylase; Provisional
Probab=99.85 E-value=6.5e-18 Score=157.28 Aligned_cols=289 Identities=14% Similarity=0.116 Sum_probs=199.9
Q ss_pred cHHHHHHHHHHHhhhCCCCCCCCc--EEEeCChHHHHHHHHHHhc--CCCCEEEEcCCCCcchHHHHHhCCCeEEEeecc
Q 014936 79 LPLTRRAIAEYLSRDLPYKLTPND--VFVTSGCTQAIDVAMALLS--RPGANILLPRPGFPIYELSAAFRHIEVRHFDLL 154 (415)
Q Consensus 79 ~~~lr~~ia~~~~~~~~~~~~~~~--i~i~~g~~~al~~~~~~l~--~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~ 154 (415)
..++++.+.+++.+.+|. ++++ .++|+|+|+++..++.... .+++.|++++-.|++....++..|.+...++.+
T Consensus 63 ~~~~e~~~~~~~a~l~g~--~~~~~~G~~TsGgTean~~a~~~ar~~~~~~~ii~s~~~H~Sv~ka~~~lg~~~~~V~~~ 140 (380)
T PRK02769 63 SFDFERDVMNFFAELFKI--PFNESWGYITNGGTEGNLYGCYLARELFPDGTLYYSKDTHYSVSKIARLLRIKSRVITSL 140 (380)
T ss_pred hHHHHHHHHHHHHHHhCC--CCCCCCEEEecChHHHHHHHHHHHHHhCCCcEEEeCCCceehHHHHHHHcCCCCceeccC
Confidence 356666666666666663 3344 4889999999887765542 467899999999999999999999998888875
Q ss_pred CCCCCCCChhHHHhhcCCC---ceEEEecCCCCccccCCCHHHHHHHHHHHhhcC---cEEEEccccCCcccCCC-Cccc
Q 014936 155 PDKGWEVDLDDIESLADQN---TVALVIINPGNPCGNVYSYQHLQKLAETANKLK---TLVIADEVYGHLVFGDK-PFVP 227 (415)
Q Consensus 155 ~~~~~~~~~~~l~~~~~~~---~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~---~~li~De~~~~~~~~~~-~~~~ 227 (415)
+ ++.+|+++|+++++++ +.+|+++.++|+||.+ +++++|+++|+++| +++++|.+++.+...-. ...+
T Consensus 141 ~--~g~id~~~L~~~i~~~~~~t~lvv~t~gtt~tG~i---dpi~~I~~i~~~~g~~~~~lHVDaA~gg~~~p~~~~~~~ 215 (380)
T PRK02769 141 P--NGEIDYDDLISKIKENKNQPPIIFANIGTTMTGAI---DNIKEIQEILKKIGIDDYYIHADAALSGMILPFVNNPPP 215 (380)
T ss_pred C--CCcCcHHHHHHHHHhCCCCcEEEEEEeCCCCCccc---CCHHHHHHHHHHhCCCceEEEEEecccceeecccCcccc
Confidence 4 4569999999998775 8889999999999999 66888888899998 69999999998653211 1011
Q ss_pred ccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhh--------ccccCCchhHHHHHHHHhhCC
Q 014936 228 MGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKY--------FDILGDPATFIQAAVPSILQQ 299 (415)
Q Consensus 228 ~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~a~~~~l~~ 299 (415)
+. +.. .-..+..|.+|.++ ....+|.++.++ +..+.+... ....++.+.....++...|+.
T Consensus 216 ~d-~~~-~vDsis~s~HK~~~-~P~g~G~l~~r~--------~~~~~~~~~~~yl~~~d~t~~GSR~g~~~l~lw~aL~~ 284 (380)
T PRK02769 216 FS-FAD-GIDSIAISGHKFIG-SPMPCGIVLAKK--------KYVERISVDVDYIGSRDQTISGSRNGHTALLLWAAIRS 284 (380)
T ss_pred CC-ccC-CCCEEEECCcccCC-CCCCcEEEEEeh--------hhhhhcccCccccCCCCCCccCCCCcHHHHHHHHHHHH
Confidence 11 111 11255668999854 334589988875 233332110 011233344455556666665
Q ss_pred CcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCC
Q 014936 300 PDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGL 379 (415)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~ 379 (415)
...+.+++..++..++++++.+.|++. +++.+..|. .+.+.++.+ ++ ++ . .|..+.+-
T Consensus 285 lg~~G~~~~~~~~~~la~~l~~~L~~~-g~~~~~~p~-~~~v~f~~~--------~~-~~----~--~~w~l~~~----- 342 (380)
T PRK02769 285 LGSKGLRQRVQHCLDMAQYAVDRLQAN-GIPAWRNPN-SITVVFPCP--------SE-RI----W--KKWHLATS----- 342 (380)
T ss_pred HCHHHHHHHHHHHHHHHHHHHHHHHhC-CCEEEcCCC-ceEEEEcCC--------CH-HH----H--hCeeEccc-----
Confidence 556788999999999999999999886 777565565 344443332 11 22 1 35555443
Q ss_pred CCeEEEEe--eCChhhHHHHHHHHHHHHHH
Q 014936 380 KNWLRVTF--AVDPYSLEECLDRIKSFYQR 407 (415)
Q Consensus 380 ~~~iRi~~--~~~~~~l~~~l~~l~~~~~~ 407 (415)
..++|+.+ ..+++.+++.++.|......
T Consensus 343 ~~~~hi~~~~~~~~~~~~~f~~dl~~~~~~ 372 (380)
T PRK02769 343 GNQAHIITMPHHNKQQIDSLIDELIFDLKN 372 (380)
T ss_pred CCEEEEEECCCCCHHHHHHHHHHHHHHHhc
Confidence 25899999 36788999999998877664
No 284
>PLN02760 4-aminobutyrate:pyruvate transaminase
Probab=99.84 E-value=6.3e-18 Score=162.85 Aligned_cols=354 Identities=16% Similarity=0.109 Sum_probs=213.2
Q ss_pred ccCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHH
Q 014936 32 KNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQ 111 (415)
Q Consensus 32 ~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~ 111 (415)
.+|+.++||..|.-....+ -.+|.+.+++++++...... .....+..+....+++.+.+... +..-+.++++++|++
T Consensus 86 ~dG~~ylD~~sg~~~~~lG-h~hp~v~~Av~~ql~~~~~~-~~~~~~~~~~~~~lae~L~~~~~-~~~~~~v~f~~SGsE 162 (504)
T PLN02760 86 INGKKYLDALAGLWCTALG-GSEPRLVAAATEQLNKLPFY-HSFWNRTTKPSLDLAKELLEMFT-ARKMGKVFFTNSGSE 162 (504)
T ss_pred CCCCEEEEcCcCHHhcccC-CCCHHHHHHHHHHHhhccce-ecccccCcHHHHHHHHHHHhhcC-CCCCCEEEEeCChHH
Confidence 3588999998874222222 35799999999998753221 01001223445555555543221 122357999999999
Q ss_pred HHHHHHHHhc-------CCC-CEEEEcCCCCcchHHHHHh-CCCe------------EEEeeccCCCCCC----------
Q 014936 112 AIDVAMALLS-------RPG-ANILLPRPGFPIYELSAAF-RHIE------------VRHFDLLPDKGWE---------- 160 (415)
Q Consensus 112 al~~~~~~l~-------~~g-d~vi~~~p~y~~~~~~~~~-~g~~------------~~~~~~~~~~~~~---------- 160 (415)
|++.+++... .++ .+|+....+|++....+.. .|.. +..++. .+.+.
T Consensus 163 A~e~AlKlAr~~~~~~g~~~r~~iI~~~~~yHG~t~~a~slsg~~~~~~~~~~~~~~~~~~~~--p~~~~~~~~~~~~~~ 240 (504)
T PLN02760 163 ANDTQVKLVWYYNNALGRPNKKKFIARSKSYHGSTLISASLSGLPALHQKFDLPAPFVLHTDC--PHYWRFHLPGETEEE 240 (504)
T ss_pred HHHHHHHHHHHHHHhcCCCCCcEEEEECCCccCChHhhhhccCChhhccCCCCCCCCcEEeCC--CcccccCCCCCcHHH
Confidence 9999999873 123 5788888888876543322 2211 111111 01010
Q ss_pred ---CChhHHHhhcC---CCceEEEecCC-CCccccC-CCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccC
Q 014936 161 ---VDLDDIESLAD---QNTVALVIINP-GNPCGNV-YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFG 232 (415)
Q Consensus 161 ---~~~~~l~~~~~---~~~~~v~i~~p-~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~ 232 (415)
...+++++.+. +...+.++..| ....|.+ .|.+.+++|.++|++||+++|.||++.++...|.... ...++
T Consensus 241 ~~~~~~~~le~~l~~~~~~~iAAvI~EPv~g~gG~~~p~~~yl~~lr~lc~~~g~lLI~DEV~TGfGRtG~~~a-~e~~g 319 (504)
T PLN02760 241 FSTRLADNLENLILKEGPETIAAFIAEPVMGAGGVIPPPATYFEKIQAVLKKYDILFIADEVICAFGRLGTMFG-CDKYN 319 (504)
T ss_pred HHHHHHHHHHHHHHhcCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEecchhhCCcccchhhH-HHhcC
Confidence 01234555552 23456677777 4455665 5788899999999999999999999987765555322 22233
Q ss_pred CCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhh--------ccccCCchhHHHHHHHHhhCCCcHHH
Q 014936 233 STVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKY--------FDILGDPATFIQAAVPSILQQPDEVF 304 (415)
Q Consensus 233 ~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~a~~~~l~~~~~~~ 304 (415)
..+. +.+++|.++.+.+++|.+++++ ++.+.+... ...+++.+|++.+++.+.|+...+
T Consensus 320 v~PD---ivtlgK~lggG~~PigAv~~~~--------~i~d~~~~~~~~~~~~~h~~T~~gnPl~~Aaala~Le~i~~-- 386 (504)
T PLN02760 320 IKPD---LVSLAKALSSAYMPIGAVLVSP--------EISDVIHSQSNKLGSFAHGFTYSGHPVSCAVALEALKIYKE-- 386 (504)
T ss_pred CCCc---EEEecccccCCccccceEeecH--------HHHhhhhcccccccCcccCCCCCCCHHHHHHHHHHHHHHHh--
Confidence 2222 3478999644336899998865 677766431 223566789999999888865322
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCCCcCC-CCCCCceEEEEecCccccC-C-CCC----HHHHHHHHHhhcCeEEEcCCCC
Q 014936 305 FKKTLNLLKQSVDICYNKIKEIPCISCP-HKPEGSMAVMLKLNLSLLD-D-IID----DIDFCFKLAKEESVIILPGTAV 377 (415)
Q Consensus 305 ~~~~~~~~~~~~~~l~~~l~~~~~~~~~-~~p~~g~~~~~~l~~~~~~-~-~~~----~~~~~~~ll~~~gi~v~~g~~~ 377 (415)
++..++++++.+++.+.|+++....++ ....-|.++-+.+...... . ... ...+... +.++||.+.+..
T Consensus 387 -~~l~~~~~~~g~~l~~~L~~l~~~~~v~~vrG~Gl~~gie~~~~~~~~~~~~~~~~~~~~i~~~-~~~~Gvl~~~~g-- 462 (504)
T PLN02760 387 -RNIPEHVNKIAPRFQDGIKAFSGSPIIGEIRGTGLILGTEFVDNKSPNDPFPAEWGVGAYFGAE-CKKRGMLVRVAG-- 462 (504)
T ss_pred -CCHHHHHHHHHHHHHHHHHHHhcCCCeeeEEeCceEEEEEEecCCcccccccchhHHHHHHHHH-HHhCCcEEEecC--
Confidence 134566666666666666554221111 1234466666666321110 0 000 2234444 456799997642
Q ss_pred CCCCeEEEEee--CChhhHHHHHHHHHHHHHHHHHH
Q 014936 378 GLKNWLRVTFA--VDPYSLEECLDRIKSFYQRHAKQ 411 (415)
Q Consensus 378 ~~~~~iRi~~~--~~~~~l~~~l~~l~~~~~~~~~~ 411 (415)
..+|+++. ++++++++++++|.+++++...+
T Consensus 463 ---~~lrl~Ppl~it~eeid~~~~~l~~al~~~~~~ 495 (504)
T PLN02760 463 ---DNIMMSPPLIITPEEVDELISIYGKALKATEER 495 (504)
T ss_pred ---CEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 56899974 89999999999999999876543
No 285
>TIGR02618 tyr_phenol_ly tyrosine phenol-lyase. This model describes a group of tyrosine phenol-lyase (4.1.99.2) (beta-tyrosinase), a pyridoxal-phosphate enzyme closely related to tryptophanase (4.1.99.1) (see model TIGR02617). Both belong to the beta-eliminating lyase family (pfam01212)
Probab=99.84 E-value=1e-17 Score=154.97 Aligned_cols=321 Identities=16% Similarity=0.132 Sum_probs=214.8
Q ss_pred HHHHHH-HHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCC
Q 014936 55 HVATEA-VAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPG 133 (415)
Q Consensus 55 ~~~~~a-~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~ 133 (415)
.++.++ +......+. .|.....+.+|++.+++++ ..+.++.+++|+.|++++....++|||.| +.++
T Consensus 50 ~aMs~~q~a~~~~GDe--~yag~~s~~~lE~~va~~~--------G~~~av~v~sGT~Al~ll~~l~l~pGDeV--psn~ 117 (450)
T TIGR02618 50 NAMSDKQWAGLMMGDE--AYAGSRNFYHLERTVRELY--------GFKYVVPTHQGRGAENLLSQIAIKPGDYV--PGNM 117 (450)
T ss_pred HHHHHHHHHHhhhcch--hhcCCCcHHHHHHHHHHHH--------CCCeEEEcCCHHHHHHHHHHhCCCCcCEE--CCce
Confidence 556665 333333333 4777678899999999998 46689999999999998877778999977 6677
Q ss_pred CcchHHH-HHhCCCeEEEeecc--------CCCCCCCChhHHHhhcCCC----ceEEEecCCCC-ccccCCCHHHHHHHH
Q 014936 134 FPIYELS-AAFRHIEVRHFDLL--------PDKGWEVDLDDIESLADQN----TVALVIINPGN-PCGNVYSYQHLQKLA 199 (415)
Q Consensus 134 y~~~~~~-~~~~g~~~~~~~~~--------~~~~~~~~~~~l~~~~~~~----~~~v~i~~p~n-ptG~~~~~~~l~~i~ 199 (415)
|...... ....|+..+.++.+ ....+.+|+++|++++++. ++++.+.+++| ..|.++|.++++++.
T Consensus 118 ~f~Tt~ahIe~~Gav~vDi~~dea~~~~~~~p~~GniD~~~Le~aI~~~~~~~~~lV~~e~t~N~~GG~pvs~~~l~~I~ 197 (450)
T TIGR02618 118 YFTTTRYHQEKNGATFVDIIIDEAHDAQLNIPFKGNVDLKKLQKLIDEVGADKIPYICLAVTVNLAGGQPVSMANMREVR 197 (450)
T ss_pred eHHHHHHHHHhCCeEEEeeecccccccccCCCCCCCcCHHHHHHHhccccCcccCceEEEEecccCCCeeCCHHHHHHHH
Confidence 7554444 67788865555332 1234678999999999763 34677888887 458999999999999
Q ss_pred HHHhhcCcEEEEccccCCcc--cC-----CCCcccc-------cccCCCCCeEEEccCccccCCC-CceEEEEEeeCCCC
Q 014936 200 ETANKLKTLVIADEVYGHLV--FG-----DKPFVPM-------GVFGSTVPILTLGSLSKRWIVP-GWRLGWFVTTDPCG 264 (415)
Q Consensus 200 ~~~~~~~~~li~De~~~~~~--~~-----~~~~~~~-------~~~~~~~~~i~~~s~sK~~~~~-G~r~G~~~~~~~~~ 264 (415)
++|++||+.+|+|.++.... +- +....++ .++.. .+..|..|.++.+ | |+++.++
T Consensus 198 elA~~~Gl~vi~DaAR~~gNA~~I~~re~g~~~~~i~ei~~e~~~~aD----~~~~S~~Kd~~~~~G---G~l~~~d--- 267 (450)
T TIGR02618 198 ELCEAHGIKVFYDATRCVENAYFIKEREQGYEDKSIAEILKEMMSYAD----GCTMSGKKDCLVNIG---GFLCMND--- 267 (450)
T ss_pred HHHHHcCCEEEEEccchhhChhhhhcccccccCCCHHHHHHHHhccCc----EEEEeeccCCCCCCc---eEEEeCC---
Confidence 99999999999999997722 10 1111122 11211 4777889997666 4 5555554
Q ss_pred CCChHHHHHHHHhhccc-----c-CCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCc
Q 014936 265 MFRKPKVVERMKKYFDI-----L-GDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGS 338 (415)
Q Consensus 265 ~~~~~~~~~~~~~~~~~-----~-~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g 338 (415)
+++.++.+..... + +..+.-.+.+++..|++..+ ....++...+.++|.+.|.+. |+.+ ..|.+|
T Consensus 268 ----~~l~~k~r~~~~~~eG~~tyGgla~r~~~ala~gL~e~~~---~~y~~~r~~~a~~La~~L~~~-Gvpv-~~p~gg 338 (450)
T TIGR02618 268 ----DEMFQSAKELVVVFEGMPSYGGLAGRDMEAMAIGIREAVD---YEYIEHRVKQVRYLGDKLKAA-GVPI-VEPVGG 338 (450)
T ss_pred ----HHHHHHHHHHhhhcCCccccCchhhhhHHHHHHHHHHhhh---HHHHHHHHHHHHHHHHHHHHC-CCcc-cCCCCc
Confidence 3677777666221 1 12233344555555554221 133344445677888888888 8884 478889
Q ss_pred eEEEEecCc----cccCCCCCHHHHHHHHHhhcCeEE-EcCCCC-CC-----------CCeEEEEee---CChhhHHHHH
Q 014936 339 MAVMLKLNL----SLLDDIIDDIDFCFKLAKEESVII-LPGTAV-GL-----------KNWLRVTFA---VDPYSLEECL 398 (415)
Q Consensus 339 ~~~~~~l~~----~~~~~~~~~~~~~~~ll~~~gi~v-~~g~~~-~~-----------~~~iRi~~~---~~~~~l~~~l 398 (415)
+.++++... -+... .....+..+|-.+.||-. .-|+.. +. -.-+|+++. .+.+.++...
T Consensus 339 h~V~vda~~~lph~~~~~-~p~~al~~~ly~~~gir~~e~g~~~~~~~~~~~~~~~~~~el~rlaiprr~yt~~h~~~v~ 417 (450)
T TIGR02618 339 HAVFLDARRFLPHIPQDQ-FPAQSLAASIYVETGVRSMERGIVSAGRNNVTGEHHRPKLELVRLTIPRRVYTYAHMDVVA 417 (450)
T ss_pred ceEEEEhHHhCCCCChhh-ChHHHHHHHHHHHhCccEEeecceecccCCCCCcccCCccceeeeccccccccHhHHHHHH
Confidence 988886532 11111 136677778877888853 334432 11 146999993 5889999999
Q ss_pred HHHHHHHHH
Q 014936 399 DRIKSFYQR 407 (415)
Q Consensus 399 ~~l~~~~~~ 407 (415)
++|..+.++
T Consensus 418 ~~~~~~~~~ 426 (450)
T TIGR02618 418 DGIIKLYKH 426 (450)
T ss_pred HHHHHHHhh
Confidence 999988775
No 286
>PRK08593 4-aminobutyrate aminotransferase; Provisional
Probab=99.84 E-value=1.1e-17 Score=159.75 Aligned_cols=351 Identities=14% Similarity=0.091 Sum_probs=208.0
Q ss_pred ccCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCC-CCcEEEeCChH
Q 014936 32 KNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLT-PNDVFVTSGCT 110 (415)
Q Consensus 32 ~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~-~~~i~i~~g~~ 110 (415)
.+|+.++||..|.-....+. .+|.+.+++++++......... ....+....+++.+.+..+ .. .+.++++++|+
T Consensus 39 ~dG~~ylD~~~g~~~~~lGH-~~p~v~~Ai~~ql~~~~~~~~~--~~~~~~~~~lae~L~~~~p--~~~~~~v~f~~SGs 113 (445)
T PRK08593 39 VDGKTYIDLLASASSQNVGH-APPRVVEAIKAQADKFIHYTPA--YMYHEPLVRLAKKLCELAP--GDFEKRVTFGLSGS 113 (445)
T ss_pred CCCCEEEECCccHHhhcCCC-CCHHHHHHHHHHHHhccCcccc--ccCCHHHHHHHHHHHHhCC--CCCCCEEEECCchH
Confidence 35888999977742211111 4799999999998754321110 0112333444444443222 12 25899999999
Q ss_pred HHHHHHHHHhc-CCC-CEEEEcCCCCcchHHHHHhC-CC-------------eEEEeeccCCCC--CC-CC-------hh
Q 014936 111 QAIDVAMALLS-RPG-ANILLPRPGFPIYELSAAFR-HI-------------EVRHFDLLPDKG--WE-VD-------LD 164 (415)
Q Consensus 111 ~al~~~~~~l~-~~g-d~vi~~~p~y~~~~~~~~~~-g~-------------~~~~~~~~~~~~--~~-~~-------~~ 164 (415)
+|++.+++... -.| .+|+....+|++....+... +. .+..++...... +. .+ ++
T Consensus 114 eA~e~AiklAr~~tgr~~ii~~~~~YHG~t~~als~s~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 193 (445)
T PRK08593 114 DANDGIIKFARAYTGRPYIISFTNAYHGSTYGSLSMSGISLNMRRKYGPLLPGFVHIPFPDKYRGMYEEPDANFVEEYLA 193 (445)
T ss_pred HHHHHHHHHHHHhhCCCeEEEECCCcCCCcHHHHhhcCCCcccccCCCCCCCCcEEeCCCccccccccCCcHHHHHHHHH
Confidence 99999998643 122 46888888888865544321 11 122222211000 00 01 23
Q ss_pred HHHhhcC----CCceEEEecCC-CCccccC-CCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeE
Q 014936 165 DIESLAD----QNTVALVIINP-GNPCGNV-YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPIL 238 (415)
Q Consensus 165 ~l~~~~~----~~~~~v~i~~p-~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i 238 (415)
.+++.++ ....+.+|..| .+..|.+ .|.+.+++|.++|++||+++|.||++.++...|... ....++..+.
T Consensus 194 ~~~~~~~~~~~~~~iAavI~EPv~g~gG~~~~~~~yl~~l~~lc~~~g~llI~DEv~tg~GrtG~~~-a~~~~gv~pD-- 270 (445)
T PRK08593 194 PLKEMFEKYLPADEVACIVIETIQGDGGLLEPVPGYFEALYKFCREHGILFAVDDIQQGLGRTGKWS-SISHFNITPD-- 270 (445)
T ss_pred HHHHHHHhhcCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCchHH-HHHhcCCCCC--
Confidence 3444332 23345566666 6667776 789999999999999999999999998776555421 1122222222
Q ss_pred EEccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhh-ccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHH
Q 014936 239 TLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKY-FDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVD 317 (415)
Q Consensus 239 ~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~ 317 (415)
+.+++|.++ .|+++|++++++ ++.+.+... ...+...+++++.++.+.|+...++ +..++.+++-+
T Consensus 271 -i~t~gK~l~-~G~p~gav~~~~--------~i~~~~~~~~~~~T~~~~pl~~aaa~a~l~~l~~~---~l~~~~~~~g~ 337 (445)
T PRK08593 271 -LMSFGKSLA-GGMPMSAIVGRK--------EIMESLEAPAHLFTTGANPVSCAAALATIDMIEDE---SLLQRSAEKGE 337 (445)
T ss_pred -Eeeeccccc-CCcccEEEEEcH--------HHHhhhccCCCCCCCCCCHHHHHHHHHHHHHHHhc---cHHHHHHHHHH
Confidence 337899964 679999999865 677766432 2235667888888888888653222 23344444444
Q ss_pred HHHHHhh----cCCCCcCCCCCCCceEEEEecCccccCCCCC---HHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEe--e
Q 014936 318 ICYNKIK----EIPCISCPHKPEGSMAVMLKLNLSLLDDIID---DIDFCFKLAKEESVIILPGTAVGLKNWLRVTF--A 388 (415)
Q Consensus 318 ~l~~~l~----~~~~~~~~~~p~~g~~~~~~l~~~~~~~~~~---~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~--~ 388 (415)
++.+.|+ +.|.+. . ...-|+++.+.+.........+ ...+...+ .++||.+.+.. .+.+|+.+ .
T Consensus 338 ~l~~~L~~l~~~~~~v~-~-vrG~Gl~~gi~l~~~~~~~~~~~~~~~~~~~~~-~~~Gv~~~~~~----~~~lr~~p~l~ 410 (445)
T PRK08593 338 YARKRFDQWVSKYNFVG-D-VRGYGLSIGIDIVSDKKLKTRDNEAALKICNYC-FEHGVVIIAVA----GNVLRFQPPLV 410 (445)
T ss_pred HHHHHHHHHHhcCCcEE-E-EeccceEEEEEEecCCCcCCCcHHHHHHHHHHH-HHCCeEEeccC----CCEEEEECCCc
Confidence 4555444 343332 1 3445666655553211000011 23444444 56799986632 36799988 4
Q ss_pred CChhhHHHHHHHHHHHHHHHHH
Q 014936 389 VDPYSLEECLDRIKSFYQRHAK 410 (415)
Q Consensus 389 ~~~~~l~~~l~~l~~~~~~~~~ 410 (415)
+++++++.+++++.++++++..
T Consensus 411 ~t~~~id~~~~~l~~~l~~~~~ 432 (445)
T PRK08593 411 ITYEQLDTALNTIEQAFTALEA 432 (445)
T ss_pred cCHHHHHHHHHHHHHHHHHHhc
Confidence 7899999999999999987543
No 287
>PRK07046 aminotransferase; Validated
Probab=99.84 E-value=5.3e-18 Score=161.76 Aligned_cols=343 Identities=16% Similarity=0.097 Sum_probs=204.5
Q ss_pred cCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHH
Q 014936 33 NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQA 112 (415)
Q Consensus 33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~a 112 (415)
.++.++||..|.-.... --.+|.+.+++++++.......++. +....+|+.+.+.. ..+.+.++++|++|
T Consensus 73 DG~~yiD~~~g~g~~~l-Gh~~p~i~~Av~~q~~~~~~~~~~~-----~~~~~lAe~l~~~~----~~~~v~F~nSGtEA 142 (453)
T PRK07046 73 DGHRYDDFCLGDTGAMF-GHSPAPVARALAEQARRGLTTMLPS-----EDAAWVGEELARRF----GLPYWQVATTATDA 142 (453)
T ss_pred CCCEEEEeccccccccc-CCCCHHHHHHHHHHHHhCCCCCCCC-----HHHHHHHHHHHHHh----CCCEEEEECCHHHH
Confidence 47889999777522111 1247899999999988654333322 34444555554322 35799999999999
Q ss_pred HHHHHHHhc--CCCCEEEEcCCCCcchHHHHHhC--CCeEE------Eee--cc---CCCCCCCChhHHHhhcCCCceEE
Q 014936 113 IDVAMALLS--RPGANILLPRPGFPIYELSAAFR--HIEVR------HFD--LL---PDKGWEVDLDDIESLADQNTVAL 177 (415)
Q Consensus 113 l~~~~~~l~--~~gd~vi~~~p~y~~~~~~~~~~--g~~~~------~~~--~~---~~~~~~~~~~~l~~~~~~~~~~v 177 (415)
++.+++... ..-++|+...-+|+++....... +.+.. .++ .. ..-.| .|++.+++.+.....+.
T Consensus 143 ~e~AlrlAR~~TGr~~ii~~~g~YHG~~d~~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-nd~~~l~~~l~~~~vAa 221 (453)
T PRK07046 143 NRFVLRWARAVTGRPKILVFNGCYHGTVDDVFVDLVDGRPVQRPGLLGQVHDLTATTRVVEF-NDLAALEAALADGDVAA 221 (453)
T ss_pred HHHHHHHHHHhhCCCEEEEECCCCCCCcHHhHhhccCCCCCCCCCCCCCCccccCceEeeCC-CCHHHHHHHhCCCCeEE
Confidence 999998864 12368999999999875432210 00000 000 00 00011 27889998886555667
Q ss_pred EecCC-CCccccC-CCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEE
Q 014936 178 VIINP-GNPCGNV-YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLG 255 (415)
Q Consensus 178 ~i~~p-~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G 255 (415)
+|..| ....|.+ .+.+.++++.++|+++|+++|.||++. +..+-.+.. ..++..+.++ +++|.+ ..|+++|
T Consensus 222 vi~EPi~g~~G~~~p~~~fl~~lr~lc~~~g~llI~DEV~t-fr~g~Gg~~--~~~gv~PDi~---t~gK~l-ggG~Pi~ 294 (453)
T PRK07046 222 VLAEPAMTNIGMVLPEPGFHEALRELTRRYGTLLVIDETHT-ISSGPGGYT--RAHGLEPDFL---VVGKPI-AGGVPCA 294 (453)
T ss_pred EEECCCCCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEcccc-CccCCcchh--HHhCCCccce---eehhhh-cCCCcce
Confidence 77788 3334544 567889999999999999999999997 322111111 1122222233 579995 5689999
Q ss_pred EEEeeCCCCCCChHHHHHHHHhh----------ccccCCchhHHHHHHHHhhCCCc-HHHHHHHHHHHHHHHHHHHHHhh
Q 014936 256 WFVTTDPCGMFRKPKVVERMKKY----------FDILGDPATFIQAAVPSILQQPD-EVFFKKTLNLLKQSVDICYNKIK 324 (415)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~a~~~~l~~~~-~~~~~~~~~~~~~~~~~l~~~l~ 324 (415)
.+++++ ++.+.+... ...++..++++.+++.+.|+... ++.+++..+.-...++.+.+.+.
T Consensus 295 av~g~~--------~i~~~~~~~~~~~~~~~~~~~~T~~gnpl~~aa~~a~L~~l~~~~~~~~~~~~g~~l~~~L~~l~~ 366 (453)
T PRK07046 295 VYGFSA--------ELAERAQAAKASAPPGHSGIGTTLSANALAMAAMRATLAEVMTEAAYAHMLALAARLAAGLRAVIA 366 (453)
T ss_pred eeeehH--------HHHHHHhhccccCCCCCceeCCCCcccHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHH
Confidence 998865 677766521 12245678999888888876432 23333333333334444444344
Q ss_pred cCCCCcCCCCCCCceEEEEecCccccCCC------CC---HHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEeeCChhhHH
Q 014936 325 EIPCISCPHKPEGSMAVMLKLNLSLLDDI------ID---DIDFCFKLAKEESVIILPGTAVGLKNWLRVTFAVDPYSLE 395 (415)
Q Consensus 325 ~~~~~~~~~~p~~g~~~~~~l~~~~~~~~------~~---~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~~~l~ 395 (415)
+. ++. .....-|..+.+.+......+. .+ ...+...+ .++||.+.|. .+.++++..+++++++
T Consensus 367 ~~-~~~-~~v~g~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~Gv~~~~~-----~~~~~~~p~~t~~did 438 (453)
T PRK07046 367 RH-GLP-WHVTRVGARVEFQFAPTPPRNGAEAAAALDPELEAALHLYL-LNRGVLITPF-----HNMMLVCPATTAADVD 438 (453)
T ss_pred hC-CCC-eEEEEeCcEEEEEEeCCCCCCHHHHhcccCHHHHHHHHHHH-HHCCCEEecc-----cCcEEEeCCCCHHHHH
Confidence 44 222 1122223333443321110000 01 12334444 4579999873 2467888889999999
Q ss_pred HHHHHHHHHHHHHH
Q 014936 396 ECLDRIKSFYQRHA 409 (415)
Q Consensus 396 ~~l~~l~~~~~~~~ 409 (415)
++++++.++++++.
T Consensus 439 ~~~~~~~~~l~~~~ 452 (453)
T PRK07046 439 RLVAAFDACLGELL 452 (453)
T ss_pred HHHHHHHHHHHHHh
Confidence 99999999987653
No 288
>KOG1359 consensus Glycine C-acetyltransferase/2-amino-3-ketobutyrate-CoA ligase [Amino acid transport and metabolism]
Probab=99.83 E-value=7.5e-19 Score=148.47 Aligned_cols=327 Identities=13% Similarity=0.108 Sum_probs=217.3
Q ss_pred ccCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCC--------CCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcE
Q 014936 32 KNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEK--------FNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDV 103 (415)
Q Consensus 32 ~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~--------~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i 103 (415)
...++++||+.++ +.++..+|++.++-.+++.... +.+|.+ -+..|+..||+|. ..++.
T Consensus 64 G~~k~ilnFcaNn---YLGLsshPeii~a~~~aleeyGaGlssvrfIcGtq~--iHk~LE~kiAqfh--------~rED~ 130 (417)
T KOG1359|consen 64 GSDKKILNFCANN---YLGLSSHPEIINAGQKALEEYGAGLSSVRFICGTQD--IHKLLESKIAQFH--------GREDT 130 (417)
T ss_pred ccccceeeecccc---cccccCChHHHHHHHHHHHHhCCCccceeEEecchH--HHHHHHHHHHHHh--------CCCce
Confidence 4467899999998 6678889999999988887421 123333 3567888999987 56788
Q ss_pred EEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcC----CCceEEEe
Q 014936 104 FVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLAD----QNTVALVI 179 (415)
Q Consensus 104 ~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~----~~~~~v~i 179 (415)
++.+++-.|+..++.++..|.|.|+.+...|.++.+..+... .+. .+|+-.++..+. .+-++|+-
T Consensus 131 ilypscfdANag~feail~pedAvfSDeLNhASIIdGirLck----ry~-------h~dv~~l~~~l~~a~k~r~klv~T 199 (417)
T KOG1359|consen 131 ILYPSCFDANAGAFEAILTPEDAVFSDELNHASIIDGIRLCK----RYR-------HVDVFDLEHCLISACKMRLKLVVT 199 (417)
T ss_pred EEeccccccchHHHHHhcChhhhhhccccccchhhhhhHHHh----hhc-------cchhHHHHHHHHHhhhheEEEEEe
Confidence 889999999999999999999999999999998887766543 111 145555554433 23344333
Q ss_pred cCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCC-CCeEEEccCccccC-CCCceEEEE
Q 014936 180 INPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGST-VPILTLGSLSKRWI-VPGWRLGWF 257 (415)
Q Consensus 180 ~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~-~~~i~~~s~sK~~~-~~G~r~G~~ 257 (415)
-..-..-|.+ .++++|++++++||.++++||+|+-+.++..+......++.. +..++.++++|++| +.| ||.
T Consensus 200 Dg~FSMDGdi---aPl~ei~~La~kYgaLlfiDecHaTgf~G~tGrGt~E~~~vm~~vdiinsTLgKAlGga~G---Gyt 273 (417)
T KOG1359|consen 200 DGVFSMDGDI---APLEEISQLAKKYGALLFIDECHATGFFGETGRGTAEEFGVMGDVDIINSTLGKALGGASG---GYT 273 (417)
T ss_pred cceeccCCCc---ccHHHHHHHHHhcCcEEEEeecccceeecCCCCChHHHhCCCCcceehhhhhhhhhcCCCC---CCc
Confidence 3335567777 567888888889999999999999888775555444444432 23488899999976 455 999
Q ss_pred EeeCCCCCCChHHHHHHHHhhcc--c-cCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCC
Q 014936 258 VTTDPCGMFRKPKVVERMKKYFD--I-LGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHK 334 (415)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~ 334 (415)
.+|+ .+++-++.... . +...+|.....+.+++.-. -.-.+...+.+.+.+.+++.++.- |+.+. .
T Consensus 274 tgp~--------~li~llrqr~RpylFSnslppavV~~a~ka~dll--m~s~~~i~~~~a~~qrfr~~me~a-GftIs-g 341 (417)
T KOG1359|consen 274 TGPK--------PLISLLRQRSRPYLFSNSLPPAVVGMAAKAYDLL--MVSSKEIQSRQANTQRFREFMEAA-GFTIS-G 341 (417)
T ss_pred cCCh--------hHHHHHHhcCCceeecCCCChhhhhhhHHHHHHH--HhhHHHHHHHHHHHHHHHHHHHhc-Cceec-C
Confidence 9876 45665555421 1 2222322222222222211 113456677778888888888765 77732 2
Q ss_pred CCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCC---CCeEEEEe--eCChhhHHHHHHHHHHHHHH
Q 014936 335 PEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGL---KNWLRVTF--AVDPYSLEECLDRIKSFYQR 407 (415)
Q Consensus 335 p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~---~~~iRi~~--~~~~~~l~~~l~~l~~~~~~ 407 (415)
.. -....+-+... ....+...++|+. ||.|..-+++.. ...||+.+ .+++|+++++++++.++.+.
T Consensus 342 ~~-hPI~pv~lGda-----~lA~~~ad~lLk~-Gi~Vigfs~PvVP~gkariRVqiSAaHt~edid~~i~Af~~vgr~ 412 (417)
T KOG1359|consen 342 AS-HPICPVMLGDA-----RLASKMADELLKR-GIYVIGFSYPVVPKGKARIRVQISAAHTEEDIDRLIEAFSEVGRF 412 (417)
T ss_pred CC-CCccceecccH-----HHHHHHHHHHHhc-CceEEeecCCcCCCCceEEEEEEehhcCHHHHHHHHHHHHHHHHh
Confidence 11 12222223321 2356777788765 999987666554 34677777 37999999999999888764
No 289
>PLN03226 serine hydroxymethyltransferase; Provisional
Probab=99.83 E-value=7.6e-18 Score=161.09 Aligned_cols=345 Identities=13% Similarity=0.062 Sum_probs=206.6
Q ss_pred cceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCC------CCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEE---
Q 014936 35 KKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGY------APTAGLPLTRRAIAEYLSRDLPYKLTPNDVFV--- 105 (415)
Q Consensus 35 ~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y------~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i--- 105 (415)
...++|-... ...++.+++++...+.+....+| +-...+.++++...+...+.++ ...+.+.+
T Consensus 34 ~~~l~liase------n~~s~~v~~a~~s~~~~ky~~G~~g~r~~~G~~~~d~lE~~~~~~~~~~f~--~~~~~~~~nv~ 105 (475)
T PLN03226 34 WKGLELIASE------NFTSRAVMEALGSCLTNKYSEGLPGARYYGGNEYIDQIETLCQKRALEAFR--LDPEKWGVNVQ 105 (475)
T ss_pred HcCeeEecCC------ccCCHHHHHHHhhHHhccccCCCCCCcCcCCChhHHHHHHHHHHHHHHHhC--CCcceeEEecC
Confidence 4567776665 45578899999888843221222 2223344554422222222222 23344433
Q ss_pred eCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHH------HHHhCCCeEE----EeeccCCCCCCCChhHHHhhcCC-Cc
Q 014936 106 TSGCTQAIDVAMALLSRPGANILLPRPGFPIYEL------SAAFRHIEVR----HFDLLPDKGWEVDLDDIESLADQ-NT 174 (415)
Q Consensus 106 ~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~------~~~~~g~~~~----~~~~~~~~~~~~~~~~l~~~~~~-~~ 174 (415)
.++|+.|+..++.+++++||+|+..+....++.. ..+..+.... .+.+++ .+..+|+++|++.+.. ++
T Consensus 106 ~~SG~~AN~av~~aL~~pgD~Il~~d~~~gGhl~H~~~~~g~~~s~~~~~~~~~~y~~~~-~~g~iD~d~Le~~l~~~~p 184 (475)
T PLN03226 106 PLSGSPANFAVYTALLQPHDRIMGLDLPHGGHLSHGYQTDGKKISATSIYFESMPYRLDE-STGLIDYDKLEKKAMLFRP 184 (475)
T ss_pred cCchHHHHHHHHHHhCCCCCEEEECCCCcCcchhhhhhhcccccccceEEEEeeeeeecC-CCCCcCHHHHHHHHhhcCC
Confidence 3778999999999999999999985532222211 1111222222 344544 3456899999998864 56
Q ss_pred eEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcc-cccccCCCCCeEEEccCccccCCCCce
Q 014936 175 VALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFV-PMGVFGSTVPILTLGSLSKRWIVPGWR 253 (415)
Q Consensus 175 ~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~-~~~~~~~~~~~i~~~s~sK~~~~~G~r 253 (415)
++|++ ..++ +|... ++++|.++|+++|+++++|++|..+........ ++. . --++++|++|++. |.+
T Consensus 185 klIv~-~~S~-~s~~~---D~a~i~~ia~~~ga~LlvD~AH~~Gli~~~~~~~p~~---~--~Div~~t~hK~L~--GP~ 252 (475)
T PLN03226 185 KLIIA-GASA-YPRDW---DYARMRKIADKVGALLMCDMAHISGLVAAQEAASPFE---Y--CDVVTTTTHKSLR--GPR 252 (475)
T ss_pred eEEEE-ecCc-CCCcc---CHHHHHHHHHHcCCEEEEEchhhhCcccCCCCCCCCC---C--CeEEEecCccccc--CCC
Confidence 65544 3333 56664 466788889999999999999988665533221 221 1 1278899999962 333
Q ss_pred EEEEEeeCCCCCC-------ChHHHHHHHHhhc--cccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhh
Q 014936 254 LGWFVTTDPCGMF-------RKPKVVERMKKYF--DILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIK 324 (415)
Q Consensus 254 ~G~~~~~~~~~~~-------~~~~~~~~~~~~~--~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~ 324 (415)
.|++++++.. .. ...++.+.++... .+.+++++....++..+++......+++..+++.++.+.+.+.|.
T Consensus 253 Gg~I~~~~~~-~~~~~~g~~~~~d~~~~i~~a~~~~~~g~p~~~~iaal~aAl~~i~~~~~~~~~~~~~~na~~L~~~L~ 331 (475)
T PLN03226 253 GGMIFFRKGP-KPPKGQGEGAVYDYEDKINFAVFPGLQGGPHNHTIAALAVALKQAMTPEFKAYQKQVKANAAALANRLM 331 (475)
T ss_pred ceEEEEchhh-cccccCCCccHHHHHHHhccccCCccCCCchHHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHH
Confidence 3888875421 00 0001222222221 123445555556666666543333456778999999999999998
Q ss_pred cCCCCcCCCCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCC-----CCCeEEEEe------eCChhh
Q 014936 325 EIPCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVG-----LKNWLRVTF------AVDPYS 393 (415)
Q Consensus 325 ~~~~~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~-----~~~~iRi~~------~~~~~~ 393 (415)
+. |+.++........+++.+... ++ ++.+ +...|.+.||.+..+..++ .++.+|++. +.++++
T Consensus 332 ~~-G~~l~~~~t~~hi~lv~~~~~---gi-~~~~-~~~~L~~~~I~~nk~~~p~~~~~~~~~giRiGt~~lt~~g~~~~d 405 (475)
T PLN03226 332 SK-GYKLVTGGTDNHLVLWDLRPL---GL-TGSR-VEKVLDLAHITLNKNAVPGDSSALVPGGVRIGTPAMTSRGLVEKD 405 (475)
T ss_pred hC-CCEEEcCCCCCCEEEEEccCC---CC-CHHH-HHHHHHHCCCEECCCCCCCCcccCCCCCcccCcHHHHHCCCCHHH
Confidence 86 888442223356667777431 11 3444 4555678899998765332 256799965 357889
Q ss_pred HHHHHHHHHHHHHH
Q 014936 394 LEECLDRIKSFYQR 407 (415)
Q Consensus 394 l~~~l~~l~~~~~~ 407 (415)
++++.+.|.++++.
T Consensus 406 ~~~ia~~i~~~~~~ 419 (475)
T PLN03226 406 FEKVAEFLHRAVTI 419 (475)
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999988874
No 290
>PRK07482 hypothetical protein; Provisional
Probab=99.83 E-value=1.2e-17 Score=159.99 Aligned_cols=354 Identities=14% Similarity=0.075 Sum_probs=215.8
Q ss_pred ccCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCC-CCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChH
Q 014936 32 KNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKF-NGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCT 110 (415)
Q Consensus 32 ~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~-~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~ 110 (415)
.+|+.++||..|.-....+ -.+|++.++++++++...+ ..+. ....+.+..+|+.+.+..+ ..-+.++++++|+
T Consensus 47 ~dG~~ylD~~sg~~~~~lG-h~~p~v~~Av~~q~~~~~~~~~~~--~~~~~~~~~lAe~L~~~~p--~~~~~v~f~~sGS 121 (461)
T PRK07482 47 AQGRRYIDAFAGLYCVNVG-YGRTEVAEAIAEQAKELAYYHTYV--GHGTEASITLSKRIIDRAP--AGMSKVYYGLSGS 121 (461)
T ss_pred CCCCEEEEcccchhhhcCC-CCCHHHHHHHHHHHHhcCcccccc--ccCCHHHHHHHHHHHHhCC--CCcCEEEEeCchH
Confidence 4588999998885332221 2479999999999886421 1111 1113455555655544222 2346899999999
Q ss_pred HHHHHHHHHhc------C-CC-CEEEEcCCCCcchHHHHHhCCC-------------eEEEeeccCCCCC---C------
Q 014936 111 QAIDVAMALLS------R-PG-ANILLPRPGFPIYELSAAFRHI-------------EVRHFDLLPDKGW---E------ 160 (415)
Q Consensus 111 ~al~~~~~~l~------~-~g-d~vi~~~p~y~~~~~~~~~~g~-------------~~~~~~~~~~~~~---~------ 160 (415)
+|++.+++... + ++ .+|+....+|++....+..... .+..++....... .
T Consensus 122 EAve~AlKlAr~~~~~~g~~~r~~Ii~~~~~YHG~t~ga~s~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 201 (461)
T PRK07482 122 DANETQIKLVWYYNNVLGRPEKKKIISRWRGYHGSGVVTGSLTGLSLFHQHFDLPIARVLHTEAPHYYRRADAGMSEEQF 201 (461)
T ss_pred HHHHHHHHHHHHHHHhcCCCCCceEEEecCccCCccHhhhhccCCchhhhccCCCCCCCEEcCCCccccccccCCCHHHH
Confidence 99999999874 1 22 5789899999986543322111 1111111100000 0
Q ss_pred --CChhHHHhhcC---CCceEEEecCC-CCccccC-CCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCC
Q 014936 161 --VDLDDIESLAD---QNTVALVIINP-GNPCGNV-YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS 233 (415)
Q Consensus 161 --~~~~~l~~~~~---~~~~~v~i~~p-~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~ 233 (415)
-+++.+++.+. ....+.+|..| +...|.+ .+.+.+++|.++|++||+++|.||++.++...|.... ...++.
T Consensus 202 ~~~~~~~l~~~~~~~~~~~iAAvi~EPvqg~gG~~~~~~~yl~~lr~lc~~~giLlI~DEV~tGfGRtG~~~a-~~~~gv 280 (461)
T PRK07482 202 SAYCADELEELILAEGPDTIAAFIAEPVLGTGGIVPPPAGYWPAIQAVLKKYDILLIADEVVTGFGRLGSMFG-SDHYGI 280 (461)
T ss_pred HHHHHHHHHHHHHhcCCCcEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHhCCEEEEeccccCCCcCcchhh-HHhcCC
Confidence 03566777663 23456677777 4455666 6788999999999999999999999999876664322 223333
Q ss_pred CCCeEEEccCccccCCCC-ceEEEEEeeCCCCCCChHHHHHHHHhh--------ccccCCchhHHHHHHHHhhCCCcHHH
Q 014936 234 TVPILTLGSLSKRWIVPG-WRLGWFVTTDPCGMFRKPKVVERMKKY--------FDILGDPATFIQAAVPSILQQPDEVF 304 (415)
Q Consensus 234 ~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~a~~~~l~~~~~~~ 304 (415)
.++++ +++|.+ ..| +++|.+++++ ++.+.+... ...+++.++++.+++.+.|+...++
T Consensus 281 ~PDiv---~~gKgl-~gG~~Pi~av~~~~--------~i~~~~~~~~~~~~~~~h~~T~~gnpl~~Aaa~a~L~~~~~~- 347 (461)
T PRK07482 281 EPDLI---TVAKGL-TSAYAPLSGSIVGE--------KVWDVLEQGSDEHGAIGHGWTYSGHPICAAAALANLDILERE- 347 (461)
T ss_pred CCCEE---EEcccc-ccCccccceeeecH--------HHHHHHhcccccCCccccCCCCCcCHHHHHHHHHHHHHHHhC-
Confidence 33344 468994 456 4899998865 566665421 2235678999999999888653221
Q ss_pred HHHHHHHHHHHHHHHHHHhh----cCCCCcCCCCCCCceEEEEecCcccc--CCCCC----HHHHHHHHHhhcCeEEEcC
Q 014936 305 FKKTLNLLKQSVDICYNKIK----EIPCISCPHKPEGSMAVMLKLNLSLL--DDIID----DIDFCFKLAKEESVIILPG 374 (415)
Q Consensus 305 ~~~~~~~~~~~~~~l~~~l~----~~~~~~~~~~p~~g~~~~~~l~~~~~--~~~~~----~~~~~~~ll~~~gi~v~~g 374 (415)
+..++.++.-+++.+.|+ +.|.+. . ...-|.++-+.+..... ..... ...+...+ .++||.+.++
T Consensus 348 --~l~~~~~~~g~~l~~~L~~l~~~~~~v~-~-vrG~Glm~giel~~~~~~~~~~~~~~~~~~~i~~~~-~~~Gvl~~~~ 422 (461)
T PRK07482 348 --NLVGNAAEVGAYFRARLRAAFGDHPLVG-E-VRGVGMLAAVEFVADRDDRTPFDPALKIGPQVSAAA-LERGVIARAM 422 (461)
T ss_pred --CHHHHHHHHHHHHHHHHHHHHhcCCCEE-E-EeeceeEEEEEeccCCCcCCCCChhhHHHHHHHHHH-HHCCcEEecC
Confidence 233334444444444443 444332 1 34557777777743110 00000 13344444 5679998653
Q ss_pred CCCCCCCeEEEEe--eCChhhHHHHHHHHHHHHHHHHHHh
Q 014936 375 TAVGLKNWLRVTF--AVDPYSLEECLDRIKSFYQRHAKQL 412 (415)
Q Consensus 375 ~~~~~~~~iRi~~--~~~~~~l~~~l~~l~~~~~~~~~~~ 412 (415)
. ..+.+|+.+ ..+++++++++++|.+++++..+++
T Consensus 423 ~---~~~~i~~~Ppl~it~~ei~~~~~~l~~~l~~~~~~~ 459 (461)
T PRK07482 423 P---HGDILGFAPPLVLTRAEADEIVAIAKDAVDEVLGRL 459 (461)
T ss_pred C---CCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHHHh
Confidence 2 136789876 5799999999999999998875543
No 291
>PRK05355 3-phosphoserine/phosphohydroxythreonine aminotransferase; Provisional
Probab=99.83 E-value=4.2e-18 Score=158.30 Aligned_cols=323 Identities=15% Similarity=0.100 Sum_probs=208.0
Q ss_pred CCCcHHHHHHHHHHHhcC---CCCCCC----CC---CCcHHHHHHHHHHHhhhCCCCCCCCcE-EEeCChHHHHHHHHHH
Q 014936 51 FHTTHVATEAVAEALLSE---KFNGYA----PT---AGLPLTRRAIAEYLSRDLPYKLTPNDV-FVTSGCTQAIDVAMAL 119 (415)
Q Consensus 51 ~~~~~~~~~a~~~~~~~~---~~~~y~----~~---~g~~~lr~~ia~~~~~~~~~~~~~~~i-~i~~g~~~al~~~~~~ 119 (415)
...++.+++++.+.+.+. ....+. .+ .-+.++++.+++++ +.+ +..++ +++++++.++++++..
T Consensus 12 ~~~p~~V~~a~~~~~~~~~~~~~g~~~~~hr~~~f~~~~~~~~~~l~~l~----~~~-~~~~v~~~~gsgt~~~Ea~~~n 86 (360)
T PRK05355 12 AMLPEEVLEQAQQELLDWNGSGMSVMEISHRSKEFEAVAEEAEADLRELL----NIP-DNYKVLFLQGGASLQFAMVPMN 86 (360)
T ss_pred CCCCHHHHHHHHHHhhccccCCccccccCCCCHHHHHHHHHHHHHHHHHh----CCC-CCcEEEEEcCCchHHHHHHHHh
Confidence 456899999998876321 001111 11 22345566666665 321 22345 4557789999999999
Q ss_pred hcCCCCEEEEcCCCCcc--hHHHHHhCCCeEEEeeccCCCCCCCChhHHHh-hcCCCceEEEecCCCCccccCCCHHHHH
Q 014936 120 LSRPGANILLPRPGFPI--YELSAAFRHIEVRHFDLLPDKGWEVDLDDIES-LADQNTVALVIINPGNPCGNVYSYQHLQ 196 (415)
Q Consensus 120 l~~~gd~vi~~~p~y~~--~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~v~i~~p~nptG~~~~~~~l~ 196 (415)
+..+|+++++...+.++ +.+.++.+|.. ..+...+..+. .+..++++ .++++++.|.+++..+.||+..+ ++.
T Consensus 87 l~~~g~~~l~i~~G~fg~r~~~~a~~~g~~-~~~~~~~~~g~-~~~~~~~~~~l~~~~~~V~~th~eTstGv~~~--~i~ 162 (360)
T PRK05355 87 LLGGGKKADYVDTGSWSKKAIKEAKKYGEV-NVAASSEDDGF-TYIPPLDEWQLSDDAAYVHYTSNETIDGTEFH--ELP 162 (360)
T ss_pred cCCCCCeEEEEECCHHHHHHHHHHHHhCCc-eEEecccccCC-CCCCChhhccCCCCCCEEEEccCCCcceEecC--ccc
Confidence 99999988877666654 45677888865 55554332332 34444444 67778899999999999999974 355
Q ss_pred HHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCC--CCC-hHHHHH
Q 014936 197 KLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCG--MFR-KPKVVE 273 (415)
Q Consensus 197 ~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~--~~~-~~~~~~ 273 (415)
+| +|+++++|.+++. +..+..+..++ +++.|..|.++.+| +|+++.+++.. ... .+.+.+
T Consensus 163 ~i------~g~l~vVDavss~----g~~~idv~~~d-----~~~~ssqK~lgP~G--lg~l~~s~~~l~~~~~~~~~~~~ 225 (360)
T PRK05355 163 DT------GDVPLVADMSSDI----LSRPIDVSKFG-----LIYAGAQKNIGPAG--LTIVIVREDLLGRALPSIPSMLD 225 (360)
T ss_pred cc------CCCcEEEEcCccc----cCccCCHHHcc-----EEEEeccccccCCc--eEEEEECHHHHhhcccCCChHHH
Confidence 55 7999999999987 33444444432 77788899998777 88888865221 000 001111
Q ss_pred HHH--hhccccCCchhHHHHHHHHhhCCCcHH-HHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCC--CCceEEEEecCcc
Q 014936 274 RMK--KYFDILGDPATFIQAAVPSILQQPDEV-FFKKTLNLLKQSVDICYNKIKEIPCISCPHKP--EGSMAVMLKLNLS 348 (415)
Q Consensus 274 ~~~--~~~~~~~~~~~~~~~a~~~~l~~~~~~-~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p--~~g~~~~~~l~~~ 348 (415)
... ......++++.....++.++|+...+. .++.+.++.++..+++.+.|++++.+..+..+ ..+..+.+.++..
T Consensus 226 ~~~~~~~~~~~~Tp~~~~i~aL~~aL~~i~~~gG~e~i~~r~~~l~~~l~~~l~~~~~~~~~~~~~~rs~~v~sf~~~~~ 305 (360)
T PRK05355 226 YKTHADNDSMYNTPPTFAIYLAGLVFKWLKEQGGVAAMEKRNQEKAALLYDAIDSSDFYRNPVAPEDRSRMNVPFTLADE 305 (360)
T ss_pred HHHHHhcCCccCCCcHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhCCCcccCCChhhcCCcEEEEEcCCh
Confidence 110 111223677777888888888765555 68999999999999999999998533222111 1223344555431
Q ss_pred ccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEee--CChhhHHHHHHHHHHHHHH
Q 014936 349 LLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFA--VDPYSLEECLDRIKSFYQR 407 (415)
Q Consensus 349 ~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~--~~~~~l~~~l~~l~~~~~~ 407 (415)
....++...+ .+.|+.+.+|.. ..+.+|+|+. ++.+|++.+++.|++++.+
T Consensus 306 -----~~~~~~~~~~-~~~Gi~~~~~~~--~~g~vRiS~~~~nt~eei~~l~~~l~~~~~~ 358 (360)
T PRK05355 306 -----ELDKKFLAEA-KAAGLVGLKGHR--SVGGMRASIYNAMPLEGVQALVDFMKEFERR 358 (360)
T ss_pred -----HHHHHHHHHH-HHCCCcccCCCC--ccCcEEEECCCCCCHHHHHHHHHHHHHHHHh
Confidence 1223443444 567999866653 3578999994 6799999999999997764
No 292
>PRK04013 argD acetylornithine/acetyl-lysine aminotransferase; Provisional
Probab=99.83 E-value=4.9e-18 Score=157.16 Aligned_cols=326 Identities=14% Similarity=0.113 Sum_probs=206.0
Q ss_pred ccCcceeEecccCCCCCCCCC-CcHHHHHHHHHHHhcCCC--CCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCC
Q 014936 32 KNEKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLSEKF--NGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSG 108 (415)
Q Consensus 32 ~~~~~~i~l~~g~~~~~~~~~-~~~~~~~a~~~~~~~~~~--~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g 108 (415)
.+++.++|+..|.-... ++ .+|++.+++++++.+... ..|.. ....++.+.++++. ..+.++++++
T Consensus 21 ~dG~~ylD~~~g~~~~~--lGh~~p~v~~ai~~ql~~~~~~~~~~~~-~~~~~la~~l~~~~--------~~~~v~~~~S 89 (364)
T PRK04013 21 SQGRRYLDLIAGIGVNV--LGHNHPEWVEEMSEQLEKLVVAGPMFEH-EEKEEMLEELSKWV--------NYEYVYMGNS 89 (364)
T ss_pred CCCCEEEEcccChhhcc--CCCCCHHHHHHHHHHHHhcCCccCCcCC-HHHHHHHHHHHhhc--------CCCEEEEeCc
Confidence 35889999987752211 23 468899999999875322 12222 22344444444443 2468999999
Q ss_pred hHHHHHHHHHHhc-CCC-CEEEEcCCCCcchHHHHHhC--------CCeEEEeeccCCCCCCCChhHHHhhcCCCceEEE
Q 014936 109 CTQAIDVAMALLS-RPG-ANILLPRPGFPIYELSAAFR--------HIEVRHFDLLPDKGWEVDLDDIESLADQNTVALV 178 (415)
Q Consensus 109 ~~~al~~~~~~l~-~~g-d~vi~~~p~y~~~~~~~~~~--------g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~ 178 (415)
+++|++.+++... .+| ++|+....+|++....+... +......++.. ..+ .|++.+++.+.+++.+++
T Consensus 90 GseA~e~Alklar~~~gr~~Ii~~~~syHG~t~~~ls~~~~~~~~~~~~p~~~~~~~-~~~-~d~~~l~~~i~~~~aAvi 167 (364)
T PRK04013 90 GTEAVEAALKFARLYTGRKEIIAMTNAFHGRTMGALSATWKPKYREDFEPLVPGFKH-IPF-NDVEAAKEAITKETAAVI 167 (364)
T ss_pred hHHHHHHHHHHHHHHhCCCEEEEECCccccCchhhccCCCCcccccCCCCCCCCcEE-ecC-CCHHHHHHHhcCCcEEEE
Confidence 9999999999865 345 78999999999866544331 11110000000 011 267888888876666666
Q ss_pred ecCCCCccccC-CCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEE
Q 014936 179 IINPGNPCGNV-YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWF 257 (415)
Q Consensus 179 i~~p~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~ 257 (415)
+...+...|.. .+.+.++++.++|++||+++|.||++.++ ..|... ....++..++++ +++|.++ .|+++|.+
T Consensus 168 vEpi~g~gG~~~~~~~yl~~lr~lc~~~gillI~DEv~tG~-RtG~~~-a~~~~gv~PDiv---~~gK~lg-gG~P~~a~ 241 (364)
T PRK04013 168 FEPIQGEGGIVPAKEEFVKTLRDLTEDVGALLIADEVQSGL-RTGKFL-AIEHYKVEPDIV---TMGKGIG-NGVPVSLT 241 (364)
T ss_pred EcCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhcC-CCCchh-HHHhcCCCCCEE---Eeccccc-CCceeEEE
Confidence 55546555664 57788999999999999999999999987 555422 222233333333 5689965 47999999
Q ss_pred EeeCCCCCCChHHHHHHHHhhccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCC
Q 014936 258 VTTDPCGMFRKPKVVERMKKYFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEG 337 (415)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~ 337 (415)
+.+. ++. . .....++..++++.+++.+.|+...++.+.+ +.++. + +.+.. +.+. . ...-
T Consensus 242 ~~~~--------~~~-~--~~~~~T~~gnp~~~aaa~a~l~~i~~~~l~~---~~~~~---l-~~l~~-~~v~-~-vRG~ 300 (364)
T PRK04013 242 LTNF--------DVE-R--GKHGSTFGGNPLACKAVAVTLRILRRERLVE---KAGEK---F-IEIKG-ERVV-T-TRGR 300 (364)
T ss_pred Eecc--------ccc-C--CCcCCCCCcCHHHHHHHHHHHHHHHhccHHH---HHHHH---H-HHhcc-Ccce-e-eeeC
Confidence 9864 221 1 1123456789999999988886543222222 22221 2 22222 2222 1 3455
Q ss_pred ceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEee--CChhhHHHHHHHHHHHHHHHH
Q 014936 338 SMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFA--VDPYSLEECLDRIKSFYQRHA 409 (415)
Q Consensus 338 g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~--~~~~~l~~~l~~l~~~~~~~~ 409 (415)
|+++-+.+.. ....+...+ .++|+.+.+.. .+.+|+... .+++++++++++|.+++.+..
T Consensus 301 Gl~~gve~~~-------~~~~i~~~~-~~~Gll~~~~g----~~vlr~~Ppl~it~~~i~~~~~~l~~~l~~~~ 362 (364)
T PRK04013 301 GLMIGIVLKK-------PVGKYVEEL-QNRGYLVHTAG----QRVIRLLPPLIISKDTMEEAKSAIEGVINDIL 362 (364)
T ss_pred cEEEEEEeCC-------cHHHHHHHH-HhCCcEEeeCC----CCEEEEeCCcccCHHHHHHHHHHHHHHHHHHh
Confidence 7777777742 234455554 56799987642 368999984 689999999999999997643
No 293
>PLN02590 probable tyrosine decarboxylase
Probab=99.83 E-value=8.1e-18 Score=161.65 Aligned_cols=340 Identities=11% Similarity=0.047 Sum_probs=219.3
Q ss_pred HHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCC-----CCcEEEeCChHHHHHHHHHHhcC-------
Q 014936 55 HVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLT-----PNDVFVTSGCTQAIDVAMALLSR------- 122 (415)
Q Consensus 55 ~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~-----~~~i~i~~g~~~al~~~~~~l~~------- 122 (415)
..+-+.+...+... ...|...+...++++.+.+|+.+.+|.+-. ...-++++|+|+++..++.+..+
T Consensus 145 ~~lgd~l~sa~n~~-~~~~~~sPa~t~lE~~vi~wl~~l~glp~~~~~~~~~gG~~~sGgSeAnl~al~aAR~~~~~~~g 223 (539)
T PLN02590 145 GFLGEMLNAGLSVV-GFTWLTSPAATELEIIVLDWLAKLLQLPDHFLSTGNGGGVIQGTGCEAVLVVVLAARDRILKKVG 223 (539)
T ss_pred HHHHHHHHHhcccc-cCCcccCchhHHHHHHHHHHHHHHhCCCcccccCCCCceEEcCchHHHHHHHHHHHHHHHHhhhc
Confidence 33444444444432 234555567789999999999998886532 13467899999998887766432
Q ss_pred ----CCCEEEEcCCCCcchHHHHHhCCC---eEEEeeccCCCCCCCChhHHHhhcCCC------ceEEEecCCCCccccC
Q 014936 123 ----PGANILLPRPGFPIYELSAAFRHI---EVRHFDLLPDKGWEVDLDDIESLADQN------TVALVIINPGNPCGNV 189 (415)
Q Consensus 123 ----~gd~vi~~~p~y~~~~~~~~~~g~---~~~~~~~~~~~~~~~~~~~l~~~~~~~------~~~v~i~~p~nptG~~ 189 (415)
+.-.|++++.+|+++..++...|+ +++.++++..+++.+|++.|++++++. +.+|+.+-.+..||.+
T Consensus 224 ~~~~~~~vvy~S~~aH~Sv~KAa~ilGlg~~~vr~Vp~d~~~~~~md~~~L~~~I~~d~~~g~~P~~VvaTaGTT~tGai 303 (539)
T PLN02590 224 KTLLPQLVVYGSDQTHSSFRKACLIGGIHEENIRLLKTDSSTNYGMPPESLEEAISHDLAKGFIPFFICATVGTTSSAAV 303 (539)
T ss_pred ccCCCCEEEEecCCchHHHHHHHHHcCCCcccEEEEeCCCCCCCcCCHHHHHHHHHHHHhcCCCcEEEEEEeCCCCCccc
Confidence 112566788899999999999998 478888865456789999999988542 3455566667789999
Q ss_pred CCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCccc-ccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCCh
Q 014936 190 YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVP-MGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRK 268 (415)
Q Consensus 190 ~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~-~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~ 268 (415)
+++.+|+++|++||+|+++|.+|+++..-...... +..+... . -+...++|+ +.....+|.++++++.
T Consensus 304 ---Dpl~~Ia~i~~~~g~WlHVDaA~GG~al~~~~~r~~~~Gie~A-D-Sit~D~HK~-l~~p~~cg~llvr~~~----- 372 (539)
T PLN02590 304 ---DPLVPLGNIAKKYGIWLHVDAAYAGNACICPEYRKFIDGIENA-D-SFNMNAHKW-LFANQTCSPLWVKDRY----- 372 (539)
T ss_pred ---CCHHHHHHHHHHhCCeEEEecchhhhhhcChhhHHHhcCCccC-C-EEEECchhh-cCcCcCEEEEEecCHH-----
Confidence 99999999999999999999999987643222111 1222111 1 334478998 5666778999887643
Q ss_pred HHHHHHHHhh-----------------ccccCCc-hhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCc
Q 014936 269 PKVVERMKKY-----------------FDILGDP-ATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCIS 330 (415)
Q Consensus 269 ~~~~~~~~~~-----------------~~~~~~~-~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~ 330 (415)
.+.+.+... ...+... -......+...|+....+.++++.++.-+.++++.+.|++.|+++
T Consensus 373 -~l~~a~~~~~~YL~~~~~~~~~~~d~~d~~i~lsRr~raLklW~~lr~~G~~G~~~~i~~~~~lA~~~~~~l~~~~~fe 451 (539)
T PLN02590 373 -SLIDALKTNPEYLEFKVSKKDTVVNYKDWQISLSRRFRSLKLWMVLRLYGSENLRNFIRDHVNLAKHFEDYVAQDPSFE 451 (539)
T ss_pred -HHHHHhhcCHHHhCCcccccccCCCccccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeE
Confidence 122222110 0001111 112222333334444457889999999999999999999998999
Q ss_pred CCCCCCCceEEEEecCccccCC--C-CCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEee---CChhhHHHHHHHHHHH
Q 014936 331 CPHKPEGSMAVMLKLNLSLLDD--I-IDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFA---VDPYSLEECLDRIKSF 404 (415)
Q Consensus 331 ~~~~p~~g~~~~~~l~~~~~~~--~-~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~---~~~~~l~~~l~~l~~~ 404 (415)
++..|.-+ .+.+++....... . .-..++.+++.+...+.+.+ +......++|+++. +++++++.+++.|.+.
T Consensus 452 l~~~~~l~-iVcFr~~~~~~~~~~~~~ln~~l~~~l~~~G~~~vs~-t~~~g~~~lR~~i~n~~T~~~dv~~~~~~i~~~ 529 (539)
T PLN02590 452 VVTTRYFS-LVCFRLAPVDGDEDQCNERNRELLAAVNSTGKIFISH-TALSGKFVLRFAVGAPLTEEKHVTEAWQIIQKH 529 (539)
T ss_pred EecCCceE-EEEEEecCCCCCHHHHHHHHHHHHHHHHhCCCEEEEe-eEECCEEEEEEEecCCCCCHHHHHHHHHHHHHH
Confidence 65444443 4444543211000 0 00234445554444444444 33333468999994 5789999999999988
Q ss_pred HHHHH
Q 014936 405 YQRHA 409 (415)
Q Consensus 405 ~~~~~ 409 (415)
..++-
T Consensus 530 a~~~~ 534 (539)
T PLN02590 530 ASKFT 534 (539)
T ss_pred HHHhc
Confidence 76653
No 294
>PLN02880 tyrosine decarboxylase
Probab=99.83 E-value=7.1e-18 Score=162.13 Aligned_cols=340 Identities=8% Similarity=-0.001 Sum_probs=218.1
Q ss_pred HHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCC-----CCcEEEeCChHHHHHHHHHHhcC-------
Q 014936 55 HVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLT-----PNDVFVTSGCTQAIDVAMALLSR------- 122 (415)
Q Consensus 55 ~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~-----~~~i~i~~g~~~al~~~~~~l~~------- 122 (415)
..+-+.+...+... ...|...+...++++.+.+|+.+.+|.+-. ...-++|+|+|+++..++.+..+
T Consensus 97 ~~lad~l~~~~n~~-~~~~~~sp~~~~lE~~vi~wl~~l~g~p~~~~~~~~~gG~~tsggs~anl~al~~AR~~~~~~~g 175 (490)
T PLN02880 97 GFLGEMLSAGLNIV-GFSWITSPAATELEMIVLDWLAKLLNLPEQFLSTGNGGGVIQGTASEAVLVVLLAARDRVLRKVG 175 (490)
T ss_pred HHHHHHHHHhhccC-CcccccCcccHHHHHHHHHHHHHHhCCCchhhcCCCCceEEcCccHHHHHHHHHHHHHHHHHHhc
Confidence 34444444444432 223443446789999999999998886532 12467899999998887766532
Q ss_pred ----CCCEEEEcCCCCcchHHHHHhCCCe---EEEeeccCCCCCCCChhHHHhhcCCC------ceEEEecCCCCccccC
Q 014936 123 ----PGANILLPRPGFPIYELSAAFRHIE---VRHFDLLPDKGWEVDLDDIESLADQN------TVALVIINPGNPCGNV 189 (415)
Q Consensus 123 ----~gd~vi~~~p~y~~~~~~~~~~g~~---~~~~~~~~~~~~~~~~~~l~~~~~~~------~~~v~i~~p~nptG~~ 189 (415)
+.-.|++++.+|+++..++...|+. ++.+|++..+++.+|++.|++++++. +.+|+.+-.+..||.+
T Consensus 176 ~~~~~~~vv~~S~~aH~Sv~Kaa~~lGlg~~~v~~Vp~d~~~~~~md~~~L~~~i~~~~~~g~~p~~vvataGTT~~Gai 255 (490)
T PLN02880 176 KNALEKLVVYASDQTHSALQKACQIAGIHPENCRLLKTDSSTNYALAPELLSEAISTDLSSGLIPFFLCATVGTTSSTAV 255 (490)
T ss_pred ccccCCeEEEEcCCchHHHHHHHHHcCCCHHHEEEeecCCCcCCcCCHHHHHHHHHHHHHCCCccEEEEEecCCCcCccc
Confidence 1125667888999999999999985 77888865556789999999988542 3455566667889999
Q ss_pred CCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcc-cccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCCh
Q 014936 190 YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFV-PMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRK 268 (415)
Q Consensus 190 ~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~-~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~ 268 (415)
+++++|+++|+++|+|+++|.+|+++........ .+..+... .-+..+++|+ +.....+|.+++++..
T Consensus 256 ---Dpl~eI~~i~~~~~iwlHVDaA~gg~~~~~~~~~~~l~gie~a--DSit~d~HKw-l~~P~~~g~llvr~~~----- 324 (490)
T PLN02880 256 ---DPLLELGKIAKSNGMWFHVDAAYAGSACICPEYRHYIDGVEEA--DSFNMNAHKW-FLTNFDCSLLWVKDRN----- 324 (490)
T ss_pred ---CcHHHHHHHHHHcCCEEEEehhhHHHHHhCHHHHHHhcCchhc--CEEEECchhh-cCCCccEEEEEEeCHH-----
Confidence 7789999999999999999999998753321111 12222111 1455689998 5677779999987522
Q ss_pred HHHHHHHHhhcc-cc--------------CC---chhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCc
Q 014936 269 PKVVERMKKYFD-IL--------------GD---PATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCIS 330 (415)
Q Consensus 269 ~~~~~~~~~~~~-~~--------------~~---~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~ 330 (415)
.+.+.+..... .. ++ ........+...|+....+.+.++.++..++++++.+.|++.++++
T Consensus 325 -~l~~~~~~~~~Yl~~~~~~~~~~~~~~~~~i~~~rr~~alklw~~l~~~G~~g~~~~i~~~~~lA~~~~~~l~~~~~~e 403 (490)
T PLN02880 325 -ALIQSLSTNPEFLKNKASQANSVVDYKDWQIPLGRRFRSLKLWMVLRLYGVENLQSYIRNHIKLAKEFEQLVAQDSRFE 403 (490)
T ss_pred -HHHHHHccCHHHhcCccccccCCCChhccCcCCCCcccHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhcCCCEE
Confidence 22222211100 00 00 0001111222224444457778888888899999999999988998
Q ss_pred CCCCCCCceEEEEecCccccCCCCC----HHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEee---CChhhHHHHHHHHHH
Q 014936 331 CPHKPEGSMAVMLKLNLSLLDDIID----DIDFCFKLAKEESVIILPGTAVGLKNWLRVTFA---VDPYSLEECLDRIKS 403 (415)
Q Consensus 331 ~~~~p~~g~~~~~~l~~~~~~~~~~----~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~---~~~~~l~~~l~~l~~ 403 (415)
++..|. ...+.++++..... ... ..++.+++.++..+.+.+.. +....++|+++. +++++++.+++.|.+
T Consensus 404 l~~~~~-~~iv~Fr~~~~~~~-~~~~~~~n~~l~~~l~~~g~~~v~~t~-~~g~~~lR~~~~n~~tt~~di~~~~~~i~~ 480 (490)
T PLN02880 404 VVTPRI-FSLVCFRLVPPKNN-EDNGNKLNHDLLDAVNSSGKIFISHTV-LSGKYVLRFAVGAPLTEERHVTAAWKVLQD 480 (490)
T ss_pred EecCCc-eEEEEEEEeCCCCC-hhhHHHHHHHHHHHHHhCCCEEEEEEE-ECCEEEEEEEecCCCCCHHHHHHHHHHHHH
Confidence 554444 44555566431110 000 13455555555566665433 333579999994 467999999999999
Q ss_pred HHHHHHH
Q 014936 404 FYQRHAK 410 (415)
Q Consensus 404 ~~~~~~~ 410 (415)
..+++..
T Consensus 481 ~~~~~~~ 487 (490)
T PLN02880 481 EASKLLG 487 (490)
T ss_pred HHHHHHH
Confidence 8887654
No 295
>PRK05639 4-aminobutyrate aminotransferase; Provisional
Probab=99.83 E-value=1.6e-17 Score=158.64 Aligned_cols=350 Identities=16% Similarity=0.147 Sum_probs=207.2
Q ss_pred ccCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCC--CCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCCh
Q 014936 32 KNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFN--GYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGC 109 (415)
Q Consensus 32 ~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~--~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~ 109 (415)
.+++.++||..|.-.... --.+|.+.+++++++....+. .|.. .+.+..+++.+.+..+ ...+.++++++|
T Consensus 50 ~dG~~ylD~~~g~~~~~l-Gh~~p~i~~Ai~~ql~~~~~~~~~~~~----~~~~~~lae~L~~~~p--~~~~~v~f~~SG 122 (457)
T PRK05639 50 VDGNVFIDFLAGAAAAST-GYSHPKLVKAVQEQVALIQHSMIGYTH----SERAIRVAEKLAEISP--IENPKVLFGLSG 122 (457)
T ss_pred CCCCEEEECCcCHHhhcc-CCCCHHHHHHHHHHHHhccccccCccC----CHHHHHHHHHHHhhCC--CCcCEEEEeCch
Confidence 347889999877422111 124788999999998753221 2222 2333344444443222 223689999999
Q ss_pred HHHHHHHHHHhc--CCCCEEEEcCCCCcchHHHHHhC-CC-------------eEEEeeccCCCC--CC----CCh----
Q 014936 110 TQAIDVAMALLS--RPGANILLPRPGFPIYELSAAFR-HI-------------EVRHFDLLPDKG--WE----VDL---- 163 (415)
Q Consensus 110 ~~al~~~~~~l~--~~gd~vi~~~p~y~~~~~~~~~~-g~-------------~~~~~~~~~~~~--~~----~~~---- 163 (415)
++|++.+++... ....+|+....+|++....+... +. ++..+|.+.... +. -+.
T Consensus 123 sEA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 202 (457)
T PRK05639 123 SDAVDMAIKVSKFSTRRPWILAFIGAYHGQTLGATSVAAFQSSQKRGFSPLMPNVVWIPYPNPYRNPWGINGYEEPDELI 202 (457)
T ss_pred HHHHHHHHHHHHHhcCCCeEEEECCCcCCccHHHHHHcCCCcccccCCCCCCCCceEeCCCccccccccccccCCHHHHH
Confidence 999999998864 22357899999999866544321 10 122233211000 00 012
Q ss_pred ----hHHHhhc-----CCCceEEEecCC-CCccccC-CCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccC
Q 014936 164 ----DDIESLA-----DQNTVALVIINP-GNPCGNV-YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFG 232 (415)
Q Consensus 164 ----~~l~~~~-----~~~~~~v~i~~p-~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~ 232 (415)
+.+++.+ .+...+.+|..| +...|.+ .|.+.+++|.++|++||+++|.||++.++...|.... ...++
T Consensus 203 ~~~~~~le~~l~~~~~~~~~iAAvI~EPiqg~gG~~~p~~~yl~~l~~lc~~~g~llI~DEv~tG~GrtG~~~a-~~~~g 281 (457)
T PRK05639 203 NRFLDYLENYVFSHVVPPDEVAALFAEPIQGDAGIVVPPENFFKELKKLLDEHGILLVMDEVQTGIGRTGKWFA-SEWFE 281 (457)
T ss_pred HHHHHHHHHHHHHhhcCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhccCcCchHHH-HHhcC
Confidence 2344433 234456677777 5556764 6788899999999999999999999997655554221 12223
Q ss_pred CCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhhccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHH
Q 014936 233 STVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLL 312 (415)
Q Consensus 233 ~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~ 312 (415)
...+++ +++|.+ ..|+.+|++++++ ++.+........+...+++...++.+.|+...+ ++..++.
T Consensus 282 v~PDiv---~~gK~l-~gG~pi~av~~~~--------~i~~~~~~~~~~T~~g~p~~~aaa~a~l~~l~~---~~l~~~~ 346 (457)
T PRK05639 282 VKPDLI---IFGKGV-ASGMGLSGVIGRK--------ELMDLTSGSALLTPAANPVISAAAEATLEIIEE---ENLLKNA 346 (457)
T ss_pred CCCCEE---Eechhh-cCCCcceeEEehH--------HHHhhcCCCcccCCCcCHHHHHHHHHHHHHHHH---ccHHHHH
Confidence 233333 379995 4578999999865 555522111223556788888888888765322 1233444
Q ss_pred HHHHHHHHHHhhc----CCCCcCCCCCCCceEEEEecCcccc-CCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEe
Q 014936 313 KQSVDICYNKIKE----IPCISCPHKPEGSMAVMLKLNLSLL-DDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTF 387 (415)
Q Consensus 313 ~~~~~~l~~~l~~----~~~~~~~~~p~~g~~~~~~l~~~~~-~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~ 387 (415)
+++-++|.+.|++ .+.+. ....-|+++-+.+..... +.......+...+ .++|+.+.+... ..+.+|+..
T Consensus 347 ~~~g~~l~~~L~~l~~~~~~~~--~VrG~Gl~~gve~~~~~~~~~~~~~~~~~~~~-~~~Gv~~~~~g~--~~~~lr~~P 421 (457)
T PRK05639 347 LKVGEFIKKRLLEMKESFEVIG--DVRGKGLMIGVEIVKENGKPDPELTGKICWRA-FELGLILPSYGM--FGNVIRITP 421 (457)
T ss_pred HHHHHHHHHHHHHHHHhCCCEE--eeccceeEEEEEEecCCCCCCHHHHHHHHHHH-HhCCeEEeecCC--CCCEEEEeC
Confidence 4455555555544 33222 134556676666632110 0000122344444 567999976421 146899998
Q ss_pred e--CChhhHHHHHHHHHHHHHHHH
Q 014936 388 A--VDPYSLEECLDRIKSFYQRHA 409 (415)
Q Consensus 388 ~--~~~~~l~~~l~~l~~~~~~~~ 409 (415)
. .+++++++++++|.+++++..
T Consensus 422 pl~it~~~id~~~~~l~~~l~~~~ 445 (457)
T PRK05639 422 PLVITKEIAEKGLEIMERAIKDAL 445 (457)
T ss_pred CCccCHHHHHHHHHHHHHHHHHHH
Confidence 4 789999999999999998764
No 296
>KOG1411 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT1/GOT2 [Amino acid transport and metabolism]
Probab=99.83 E-value=4e-19 Score=153.33 Aligned_cols=357 Identities=18% Similarity=0.198 Sum_probs=247.7
Q ss_pred hHHHHHHHhhhcccccccCcceeEecccCCCCCCC-CCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhC
Q 014936 16 TIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSC-FHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDL 94 (415)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~-~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~ 94 (415)
+|....+.+..+- +...+||+.|.-.-..+ ..+.+.|++|-++.........|-+..|.+++.+..+++. +
T Consensus 38 pILGVTeAfk~D~-----n~~KiNLgvGaYRdd~gKp~vL~~VrkAE~ql~~~~ldKEYlpI~Gl~eF~k~sakLa---~ 109 (427)
T KOG1411|consen 38 PILGVTEAFKKDP-----NPKKINLGVGAYRDDNGKPYVLPSVRKAEQQLASLSLDKEYLPITGLAEFNKLSAKLA---L 109 (427)
T ss_pred CcccHHHHHhcCC-----CcceeeecccceecCCCCeeeeHHHHHHHHHHhhhcccchhccccchHHHHHHHHHHh---h
Confidence 6666666555443 55679999996432222 3356889998888776555568999999999999999998 4
Q ss_pred CCC---CCCCcEEE--eCChHHHHHHHHHHh--cCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHH
Q 014936 95 PYK---LTPNDVFV--TSGCTQAIDVAMALL--SRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIE 167 (415)
Q Consensus 95 ~~~---~~~~~i~i--~~g~~~al~~~~~~l--~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~ 167 (415)
|.+ +..++|+. +-+||.++.+....+ .-++..|.+++|+|.+....+...|+.+..+..-.....++|.+.+.
T Consensus 110 G~~s~~ik~~Ri~tvQ~lSGTGaLriga~Fl~~f~~~~~I~ip~PTWgNh~~if~~ag~~~~~yrYyd~~t~gld~~g~l 189 (427)
T KOG1411|consen 110 GDNSPVIKEKRIVTVQTLSGTGALRVGAEFLARFYPSRDIYIPDPTWGNHKNIFKDAGLPVKFYRYYDPKTRGLDFKGML 189 (427)
T ss_pred cCCchhhhccceeEEEeccCcchhhHHHHHHHhhccccceeecCCcccccCccccccCcceeeeeeccccccccchHHHH
Confidence 422 34456654 334677776665554 35788999999999999999999999987776533344567877766
Q ss_pred hhcCCCc-eEEEec--CCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCC--cccccccCC-CCCeEEEc
Q 014936 168 SLADQNT-VALVII--NPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKP--FVPMGVFGS-TVPILTLG 241 (415)
Q Consensus 168 ~~~~~~~-~~v~i~--~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~--~~~~~~~~~-~~~~i~~~ 241 (415)
+.+.+.+ ..+++. ..|||||+-.+.+++++|..+.++.+.+-+.|-+|.+|.-+... ...+..+.. ..++..+.
T Consensus 190 edl~~~p~gs~ilLhaCaHNPTGvDPt~eqw~ki~~~~~~k~~~pffDmAYQGfaSG~~d~DA~avR~F~~~g~~~~laQ 269 (427)
T KOG1411|consen 190 EDLGEAPEGSIILLHACAHNPTGVDPTKEQWEKISDLIKEKNLLPFFDMAYQGFASGDLDKDAQAVRLFVEDGHEILLAQ 269 (427)
T ss_pred HHHhcCCCCcEEEeehhhcCCCCCCccHHHHHHHHHHhhhccccchhhhhhcccccCCchhhHHHHHHHHHcCCceEeeh
Confidence 6555432 223333 33999999999999999999999999999999999998754321 112222222 23578899
Q ss_pred cCccccCCCCceEEEE--EeeCCCCCCChHHHHHHH----Hhh-ccccCCchhHHHHHHHHhhCCCc--HHHH---HHHH
Q 014936 242 SLSKRWIVPGWRLGWF--VTTDPCGMFRKPKVVERM----KKY-FDILGDPATFIQAAVPSILQQPD--EVFF---KKTL 309 (415)
Q Consensus 242 s~sK~~~~~G~r~G~~--~~~~~~~~~~~~~~~~~~----~~~-~~~~~~~~~~~~~a~~~~l~~~~--~~~~---~~~~ 309 (415)
|++|.+|+.|-|+|.+ +|.+ .+...++ +.. +.+..+++..+...+..+|.+.. .+|+ +-+.
T Consensus 270 SyAKNMGLYgERvGa~svvc~~-------ad~A~rV~SQlk~liRpmYSnPP~hGArIv~~Il~d~~l~~~W~~evk~Ma 342 (427)
T KOG1411|consen 270 SYAKNMGLYGERVGALSVVCKD-------ADEAKRVESQLKILIRPMYSNPPLHGARIVATILSDPDLKNQWLGEVKGMA 342 (427)
T ss_pred hhhhhcchhhhccceeEEEecC-------HHHHHHHHHHHHHHhcccccCCCccchhhhhhccCChHHHHHHHHHHHHHH
Confidence 9999999999999996 4433 2333333 333 23456777788888888888743 3443 3455
Q ss_pred HHHHHHHHHHHHHhhcC--CC-CcCCCCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEE
Q 014936 310 NLLKQSVDICYNKIKEI--PC-ISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVT 386 (415)
Q Consensus 310 ~~~~~~~~~l~~~l~~~--~~-~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~ 386 (415)
+++...|..+.+.|+.. ++ +. .+..+-|+|++-.++ .+.+..+.+++-|.+.-- =|||
T Consensus 343 dRi~~mR~~L~d~L~~~gs~~~W~-hI~~QIGMF~fTgl~----------peQv~~l~ke~~iYmT~d--------GRiS 403 (427)
T KOG1411|consen 343 DRIISMRQQLFDALEKEGSPGNWS-HITKQIGMFCFTGLN----------PEQVDWLTKEYHIYLTKD--------GRIS 403 (427)
T ss_pred HhhhhhHHHHhHHhhcCCCCccHH-HHHHhhheeeecCCC----------HHHHHHHHhhheeeeccC--------ceEe
Confidence 77777888888888764 22 22 124567999987764 245677888888987632 2999
Q ss_pred e-eCChhhHHHHHHHHHHHHH
Q 014936 387 F-AVDPYSLEECLDRIKSFYQ 406 (415)
Q Consensus 387 ~-~~~~~~l~~~l~~l~~~~~ 406 (415)
+ +.+...+..+.+.|.++.+
T Consensus 404 ~aG~ss~nV~yLa~aih~vtk 424 (427)
T KOG1411|consen 404 MAGLSSSNVPYLADAIHAVTK 424 (427)
T ss_pred eccccccCCcccchhhHhHhc
Confidence 9 4677777777777665543
No 297
>PRK07678 aminotransferase; Validated
Probab=99.83 E-value=1.7e-17 Score=158.74 Aligned_cols=349 Identities=16% Similarity=0.118 Sum_probs=209.1
Q ss_pred ccCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHH
Q 014936 32 KNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQ 111 (415)
Q Consensus 32 ~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~ 111 (415)
.+|+.++||..|.-.... --.+|++.+++.+++....+.. .... .+....+|+.+.+..+ ..+.++++++|++
T Consensus 44 ~dG~~ylD~~~g~~~~~l-Gh~~p~v~~ai~~q~~~~~~~~--~~~~-~~~~~~lae~l~~~~~---~~~~v~f~~sGse 116 (451)
T PRK07678 44 IQGNRYLDGMSGLWCVNV-GYGRKELAEAAYEQLKTLSYFP--LTQS-HEPAIKLAEKLNEWLG---GEYVIFFSNSGSE 116 (451)
T ss_pred CCCCEEEEccccHHhhcC-CCCCHHHHHHHHHHHHhcCccc--cccC-CHHHHHHHHHHHHhCC---CCCEEEEeCCcHH
Confidence 348889999777422111 1247999999999887543211 1111 2333445555544332 2358999999999
Q ss_pred HHHHHHHHhcC-------CC-CEEEEcCCCCcchHHHHHhCCC-------------eEEEeeccCCCCCCC---------
Q 014936 112 AIDVAMALLSR-------PG-ANILLPRPGFPIYELSAAFRHI-------------EVRHFDLLPDKGWEV--------- 161 (415)
Q Consensus 112 al~~~~~~l~~-------~g-d~vi~~~p~y~~~~~~~~~~g~-------------~~~~~~~~~~~~~~~--------- 161 (415)
|++.+++.... +| .+|+....+|++....+..... .+..++.. +.+..
T Consensus 117 A~e~AlklAr~~t~~~g~~~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 194 (451)
T PRK07678 117 ANETAFKIARQYHAQKGEPHRYKFISRYRAYHGNSMGALAATGQAQRKYKYEPLAPGFLHVPPP--DCYRMPGIESEDIY 194 (451)
T ss_pred HHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCccHHHhhcCCCcccccccCCCCCCCEEeCCC--ccccccccCChHHH
Confidence 99999987641 23 5789999999987655433211 11112111 11110
Q ss_pred C---hhHHHhhcC---CCceEEEecCC-CCccccC-CCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCC
Q 014936 162 D---LDDIESLAD---QNTVALVIINP-GNPCGNV-YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS 233 (415)
Q Consensus 162 ~---~~~l~~~~~---~~~~~v~i~~p-~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~ 233 (415)
+ ++.+++.++ +...+.+|..| +...|.+ .+.+.++++.++|++||+++|.||++.++...|... .+..++.
T Consensus 195 ~~~~~~~l~~~~~~~~~~~iAAvi~EPiqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~-~~~~~gv 273 (451)
T PRK07678 195 DLECVKEIDRVMTWELSETIAAVIMEPIITGGGVLMPPQDYMKAVKEICQKHGALLISDEVICGFGRTGKAF-GFMNYGV 273 (451)
T ss_pred HHHHHHHHHHHHHhcCCCceEEEEEccccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhcCCcCchhH-HHHhcCC
Confidence 1 223455553 23456677777 4445665 678889999999999999999999998876555421 1223333
Q ss_pred CCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhh-------ccccCCchhHHHHHHHHhhCCCcHHHHH
Q 014936 234 TVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKY-------FDILGDPATFIQAAVPSILQQPDEVFFK 306 (415)
Q Consensus 234 ~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~a~~~~l~~~~~~~~~ 306 (415)
.+.++ +++|.++...+++|.+++++ ++.+.+... ...+++.++++.+++.+.|+...++
T Consensus 274 ~PDiv---t~gK~lggG~~Pi~av~~~~--------~i~~~~~~~~~~~~~~h~~T~~gnp~~~aaa~a~l~~l~~~--- 339 (451)
T PRK07678 274 KPDII---TMAKGITSAYLPLSATAVKK--------EIYEAFKGKGEYEHFRHVNTFGGNPAACALALKNLEIMENE--- 339 (451)
T ss_pred CCCEE---EeecccccCCcceeEEEEcH--------HHHHHHhccCcccccccCCCCCcCHHHHHHHHHHHHHHHhC---
Confidence 33333 57899654447999999975 677766531 2345678899999998888653221
Q ss_pred HHHHHHHHHHHHHHHHh----hcCCCCcCCCCCCCceEEEEecCccccC----CCCCHHHHHHHHHhhcCeEEEcCCCC-
Q 014936 307 KTLNLLKQSVDICYNKI----KEIPCISCPHKPEGSMAVMLKLNLSLLD----DIIDDIDFCFKLAKEESVIILPGTAV- 377 (415)
Q Consensus 307 ~~~~~~~~~~~~l~~~l----~~~~~~~~~~~p~~g~~~~~~l~~~~~~----~~~~~~~~~~~ll~~~gi~v~~g~~~- 377 (415)
...++.++.-+++.+.| ++.+.+. . ...-|.++-+.+...... +......+... +.++||.+.+....
T Consensus 340 ~~~~~~~~~g~~l~~~l~~~~~~~~~v~-~-vrg~Gl~~~i~~~~~~~~~~~~~~~~a~~i~~~-l~~~Gv~~~~~g~~v 416 (451)
T PRK07678 340 NLIERSAQLGELLLEQLKEELGEHPLVG-D-IRGKGLLVGIELVNDKETKEPADNDKVASVVAA-CKEKGLIIGKNGDTV 416 (451)
T ss_pred CHHHHHHHHHHHHHHHHHHHHhcCCCEE-E-EEeeceEEEEEEecCCcccCcCchHHHHHHHHH-HHHCCcEEeecCccc
Confidence 23344444444444444 3443222 1 334566666666321100 00012344444 45679999763211
Q ss_pred -CCCCeEEEEee--CChhhHHHHHHHHHHHHHH
Q 014936 378 -GLKNWLRVTFA--VDPYSLEECLDRIKSFYQR 407 (415)
Q Consensus 378 -~~~~~iRi~~~--~~~~~l~~~l~~l~~~~~~ 407 (415)
...+.+|++.. ++++++++++++|.+++++
T Consensus 417 ~~~~~~lrl~Ppl~it~~eid~~~~~l~~~l~~ 449 (451)
T PRK07678 417 AGYNNVLTLSPPLVISSEEIAFIVGTLKTALER 449 (451)
T ss_pred cCCCCEEEEECCCcCCHHHHHHHHHHHHHHHHh
Confidence 22367999984 5999999999999998865
No 298
>PRK13360 omega amino acid--pyruvate transaminase; Provisional
Probab=99.83 E-value=2.5e-17 Score=156.98 Aligned_cols=350 Identities=16% Similarity=0.134 Sum_probs=209.4
Q ss_pred ccCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCC-CCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChH
Q 014936 32 KNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKF-NGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCT 110 (415)
Q Consensus 32 ~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~-~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~ 110 (415)
.+++.++||..|.-.... --.+|.+.+++++++++..+ ..+. ...+.+..+|+.+.+..+ -..+.++++++|+
T Consensus 43 ~dG~~ylD~~~g~~~~~l-Gh~~p~v~~ai~~ql~~l~~~~~~~---~~~~~~~~la~~l~~~~p--~~~~~v~f~~sGs 116 (442)
T PRK13360 43 HDGRRVLDGTAGLWCVNA-GHGRPEIVEAVRAQAGELDYAPAFQ---MGHPKAFELANRIAEIAP--GGLNHVFFTNSGS 116 (442)
T ss_pred CCCCEEEECchhHHHhcc-CCCCHHHHHHHHHHHHhCCCcccCC---cCCHHHHHHHHHHHHhCC--CCCCEEEEeCCcH
Confidence 358889999777422111 12579999999999875221 1111 112344455555544222 1236899999999
Q ss_pred HHHHHHHHHhcC-------CC-CEEEEcCCCCcchHHHHHhC-C------------CeEEEeeccCC---CCCCC-----
Q 014936 111 QAIDVAMALLSR-------PG-ANILLPRPGFPIYELSAAFR-H------------IEVRHFDLLPD---KGWEV----- 161 (415)
Q Consensus 111 ~al~~~~~~l~~-------~g-d~vi~~~p~y~~~~~~~~~~-g------------~~~~~~~~~~~---~~~~~----- 161 (415)
+|++.+++.... +| .+|+....+|++....+... | ..+..+|.... ..+..
T Consensus 117 eA~e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~gals~tg~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~ 196 (442)
T PRK13360 117 ESVDTALKIALAYHRARGEGSRTRLIGRERGYHGVGFGGISVGGIVPNRKAFGALLPGVDHLPHTLDLARNAFSKGQPEH 196 (442)
T ss_pred HHHHHHHHHHHHHHHhcCCCCCcEEEEEcCCcCCccHhhhhccCChhhhhccCCCCCCCEEeCCCchhhccccCCChHHH
Confidence 999999987541 12 57999999999865433211 1 11122222110 00111
Q ss_pred ---ChhHHHhhcC---CCceEEEecCC-CCccccC-CCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCC
Q 014936 162 ---DLDDIESLAD---QNTVALVIINP-GNPCGNV-YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS 233 (415)
Q Consensus 162 ---~~~~l~~~~~---~~~~~v~i~~p-~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~ 233 (415)
.++.+++.+. ....+.+++.| +...|.. .+.+.+++|.++|++||+++|+||++.++...|.... ...++.
T Consensus 197 ~~~~~~~le~~l~~~~~~~~aavivEpi~g~~G~~~~~~~fl~~lr~lc~~~g~llI~DEv~tG~GrtG~~~a-~~~~gv 275 (442)
T PRK13360 197 GAELADELERLVTLHDASTIAAVIVEPVAGSTGVLIPPKGYLQRLREICDKHGILLIFDEVITGFGRLGAPFA-AQYFGV 275 (442)
T ss_pred HHHHHHHHHHHHHhcCCCcEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCccchh-hhhcCC
Confidence 1456666664 23455677777 5556765 6788899999999999999999999977654444321 122222
Q ss_pred CCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhh--------ccccCCchhHHHHHHHHhhCCCcHHHH
Q 014936 234 TVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKY--------FDILGDPATFIQAAVPSILQQPDEVFF 305 (415)
Q Consensus 234 ~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~a~~~~l~~~~~~~~ 305 (415)
...+ .+++|.++...+++|.+++++ ++.+.+... ...+++.++++..++.+.|+...+
T Consensus 276 ~PDi---vt~gK~l~gG~~P~gav~~~~--------~i~~~~~~~~~~~~~~~~~~T~~g~pl~~aaa~a~L~~l~~--- 341 (442)
T PRK13360 276 TPDL---LTCAKGLTNGAIPMGAVFVSS--------EIHDAFMQGPEAGIEFFHGYTYSGHPLACAAALATLDLYER--- 341 (442)
T ss_pred CCce---eeeeeccccCccceEEEEEcH--------HHHHHhhcCCccccccccCCCCCCCHHHHHHHHHHHHHHHh---
Confidence 2222 378999654337899998865 566655421 123556788888888888864322
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCCCcCCC-CCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEE
Q 014936 306 KKTLNLLKQSVDICYNKIKEIPCISCPH-KPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLR 384 (415)
Q Consensus 306 ~~~~~~~~~~~~~l~~~l~~~~~~~~~~-~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iR 384 (415)
+...++.+++.+++.+.|+++.....+. ....|++.-+.+............++...+ .++||.+.++. +.+|
T Consensus 342 ~~l~~~~~~~g~~l~~~l~~l~~~~~v~~vrG~Gl~~~~~l~~~~~~~~~~~~~~~~~l-~~~Gvl~~~~~-----~~lr 415 (442)
T PRK13360 342 EGLLTRAARLAPYWEDALHSLRDAPHVIDIRNLGLVGAVELAPRDGKPGKRAYEVFLKC-FEKGLMIRYTG-----DILA 415 (442)
T ss_pred CCHHHHHHHHHHHHHHHHHHhhcCCCeeeeeccceEEEEEEecCCCCcchhHHHHHHHH-HHCCcEEEecC-----CEEE
Confidence 2345666666667777776542221111 223355544444321110001233455554 56799997642 5799
Q ss_pred EEe--eCChhhHHHHHHHHHHHHHHH
Q 014936 385 VTF--AVDPYSLEECLDRIKSFYQRH 408 (415)
Q Consensus 385 i~~--~~~~~~l~~~l~~l~~~~~~~ 408 (415)
|++ ..+++++++++++|.++++++
T Consensus 416 ~~Ppl~~t~~eid~~~~~l~~~l~~~ 441 (442)
T PRK13360 416 LSPPLIIEEAQIDELFDILAQALKET 441 (442)
T ss_pred EeCCCccCHHHHHHHHHHHHHHHHHh
Confidence 997 478999999999999998653
No 299
>KOG0053 consensus Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=99.83 E-value=1.2e-17 Score=150.54 Aligned_cols=216 Identities=20% Similarity=0.126 Sum_probs=161.4
Q ss_pred CcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHH----HhCCCeEEEeec
Q 014936 78 GLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSA----AFRHIEVRHFDL 153 (415)
Q Consensus 78 g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~----~~~g~~~~~~~~ 153 (415)
....+.+.+++.. ...+.+++++|..|+..++..++..|++|+....+|.+....+ ..+|++...++.
T Consensus 78 t~~~le~~iaal~--------ga~~~l~fsSGmaA~~~al~~L~~~g~~iV~~~~~Y~gT~~~l~~~~~~~gie~~~vd~ 149 (409)
T KOG0053|consen 78 TRDVLESGIAALE--------GAAHALLFSSGMAAITVALLHLLPAGDHIVATGDVYGGTLRILRKFLPKFGGEGDFVDV 149 (409)
T ss_pred chHHHHHHHHHHh--------CCceEEEecccHHHHHHHHHHhcCCCCcEEEeCCCcccHHHHHHHHHHHhCceeeeech
Confidence 4567888888876 4567999999999999999999999999999999999866554 466777777654
Q ss_pred cCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCC
Q 014936 154 LPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS 233 (415)
Q Consensus 154 ~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~ 233 (415)
-+++.+++++++++++|++-+|.||+..+ .++++|+++|+++|+++++|+.++...+- ....++.
T Consensus 150 -------~~~~~~~~~i~~~t~~V~~ESPsNPll~v---~DI~~l~~la~~~g~~vvVDnTf~~p~~~-----~pL~lGA 214 (409)
T KOG0053|consen 150 -------DDLKKILKAIKENTKAVFLESPSNPLLKV---PDIEKLARLAHKYGFLVVVDNTFGSPYNQ-----DPLPLGA 214 (409)
T ss_pred -------hhHHHHHHhhccCceEEEEECCCCCcccc---ccHHHHHHHHhhCCCEEEEeCCcCccccc-----ChhhcCC
Confidence 26888999999999999999999999999 67888888889999999999999864321 1223444
Q ss_pred CCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhhc-cccCCchhHHHHHHHHhhCCCcHHHHHHHHHHH
Q 014936 234 TVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYF-DILGDPATFIQAAVPSILQQPDEVFFKKTLNLL 312 (415)
Q Consensus 234 ~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~ 312 (415)
+ |++.|.+|.++..+-=+|.+++.+ .+++..+++... ...++.++.....+.+-++. +.-+.++.
T Consensus 215 D---IV~hSaTKyi~Ghsdvi~G~iv~n------~~~~~~~l~~~~~~lg~~~~p~~~~ll~Rglkt-----l~lRi~~~ 280 (409)
T KOG0053|consen 215 D---IVVHSATKYIGGHSDVIGGSVVLN------SEELASRLKFLQEDLGWCEDPFDLFLLSRGLKT-----LHLRINKH 280 (409)
T ss_pred C---EEEEeeeeeecCCcceeeeEEecC------cHHHHHHHHHHHHHhcCCCCHHHHHHHhcCcch-----hhhhHHHH
Confidence 4 899999999887665555555543 236788777764 34567777776666666654 34445555
Q ss_pred HHHHHHHHHHhhcCCCCc
Q 014936 313 KQSVDICYNKIKEIPCIS 330 (415)
Q Consensus 313 ~~~~~~l~~~l~~~~~~~ 330 (415)
.++.-.+.+.|+..|.++
T Consensus 281 ~ena~~~A~~Le~~~~v~ 298 (409)
T KOG0053|consen 281 SENALKIALLLEAHPKVK 298 (409)
T ss_pred HHHHHHHHHHhhhCCcee
Confidence 566555666666555444
No 300
>PRK06943 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.83 E-value=1.8e-17 Score=158.30 Aligned_cols=350 Identities=14% Similarity=0.058 Sum_probs=212.5
Q ss_pred ccCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHH
Q 014936 32 KNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQ 111 (415)
Q Consensus 32 ~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~ 111 (415)
.+++.++|+..|.-.... --.+|.+.+++++++....+.... ....+.+..+|+.+.+..+ ..-+.++++++|++
T Consensus 51 ~dG~~ylD~~~g~~~~~l-Gh~~p~v~~Ai~~ql~~~~~~~~~--~~~~~~~~~lAe~L~~~~p--~~~~~v~f~~sGse 125 (453)
T PRK06943 51 RDGRRYLDAISSWWVNLF-GHANPRINAALKDQLDTLEHAMLA--GCTHEPAIELAERLAALTG--GTLGHAFFASDGAS 125 (453)
T ss_pred CCCCEEEEcchHHHHhcC-CCCCHHHHHHHHHHHHhcCCcccc--ccCCHHHHHHHHHHHHhCC--CCCCEEEEeCCCHH
Confidence 347889999777421111 124799999999998753211100 0112344455555544222 12358999999999
Q ss_pred HHHHHHHHhc-------CCC-CEEEEcCCCCcchHHHHHhCCC-------------eEEEeeccCCCC--CC--------
Q 014936 112 AIDVAMALLS-------RPG-ANILLPRPGFPIYELSAAFRHI-------------EVRHFDLLPDKG--WE-------- 160 (415)
Q Consensus 112 al~~~~~~l~-------~~g-d~vi~~~p~y~~~~~~~~~~g~-------------~~~~~~~~~~~~--~~-------- 160 (415)
|++.+++... .+| .+|+....+|++....+..... .+..++...... +.
T Consensus 126 Ave~AlKlA~~~~~~rg~~~r~~Ii~~~~~yHG~t~gals~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~ 205 (453)
T PRK06943 126 AVEIALKMSFHAWRNRGRGDKREFVCLANGYHGETIGALGVTDVALFKDAYDPLIRHAHVVASPDARGARPGETAADVAA 205 (453)
T ss_pred HHHHHHHHHHHHHHHhCCCCCCEEEEECCCcCCCcHHhhcccCChhhhcccccCCCCCEEECCCCccccccCCCHHHHHH
Confidence 9999999862 122 5799999999986543332211 112222111000 00
Q ss_pred CChhHHHhhcCC--CceEEEecCC--CCcccc-CCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCC
Q 014936 161 VDLDDIESLADQ--NTVALVIINP--GNPCGN-VYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTV 235 (415)
Q Consensus 161 ~~~~~l~~~~~~--~~~~v~i~~p--~nptG~-~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~ 235 (415)
-+++.+++.++. ...+.++..| +...|. ..|.+.++++.++|++||+++|.||++.++...|.... ...++..+
T Consensus 206 ~~~~~l~~~l~~~~~~iAAviiEPvvqg~gG~~~~~~~yl~~lr~lc~~~gillI~DEV~TG~GRtG~~fa-~~~~gv~P 284 (453)
T PRK06943 206 RALADVRRLFAERAGKIAALIVEPLVQCAAGMAMHDPSYLRGLRALCDRYGVHLIADEIAVGCGRTGTFFA-CEQAGVWP 284 (453)
T ss_pred HHHHHHHHHHHhCCCceEEEEEeccccccCCcccCCHHHHHHHHHHHHHcCCEEEeechhhCCCCCcchhH-HHhCCCCC
Confidence 124666666642 3455666777 566676 46889999999999999999999999998765554221 22233333
Q ss_pred CeEEEccCccccCCCC-ceEEEEEeeCCCCCCChHHHHHHHHhh-------ccccCCchhHHHHHHHHhhCCCcHHHHHH
Q 014936 236 PILTLGSLSKRWIVPG-WRLGWFVTTDPCGMFRKPKVVERMKKY-------FDILGDPATFIQAAVPSILQQPDEVFFKK 307 (415)
Q Consensus 236 ~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~a~~~~l~~~~~~~~~~ 307 (415)
+++ +++|.++ .| +++|.+++++ ++.+.+... ...+++.++++.+++.+.|+...++ +
T Consensus 285 Div---t~gKgl~-gG~~Pi~av~~~~--------ei~~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~L~~i~~~---~ 349 (453)
T PRK06943 285 DFL---CLSKGIS-GGYLPLSLVLSRD--------AIFAAFYDDDVTRGFLHSHSYTGNPLACRAALATLDLFAED---D 349 (453)
T ss_pred CeE---eeehhhc-cCcccceEEEEcH--------HHHHhhcccCccCCccCCCCCCCCHHHHHHHHHHHHHHHhc---C
Confidence 344 4689954 67 5999999975 566666421 2235667899999988888653221 2
Q ss_pred HHHHHHHHHHHHHHHhhc---CCCCcCCCCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEE
Q 014936 308 TLNLLKQSVDICYNKIKE---IPCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLR 384 (415)
Q Consensus 308 ~~~~~~~~~~~l~~~l~~---~~~~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iR 384 (415)
..++.++.-+++.+.|++ .+.+. . ...-|+++-+.+.............+... +.++||.+.+.. +.+|
T Consensus 350 l~~~~~~~G~~l~~~L~~l~~~~~v~-~-vrG~Gl~~gvel~~~~~~~~~~~~~i~~~-~~~~Gll~~~~g-----~~l~ 421 (453)
T PRK06943 350 VLARNARKSARLRAALAPLAAHPQVR-H-LRQRGTIFAFDVALDGDAARTFSRRFFEA-ALERELLLRPIG-----TTVY 421 (453)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCEE-e-EeccccEEEEEEccCCCcchHHHHHHHHH-HHHCCcEEEecC-----CEEE
Confidence 334444444555555543 34443 1 34557777776642110000012334444 456799997642 4699
Q ss_pred EEe--eCChhhHHHHHHHHHHHHHHHHH
Q 014936 385 VTF--AVDPYSLEECLDRIKSFYQRHAK 410 (415)
Q Consensus 385 i~~--~~~~~~l~~~l~~l~~~~~~~~~ 410 (415)
+++ ..+++++++++++|.+++++...
T Consensus 422 ~~Ppl~it~~eid~~~~~l~~al~~~~~ 449 (453)
T PRK06943 422 LMPPYVLDDDEIAWLAERTRATLDATLA 449 (453)
T ss_pred EeCCCcCCHHHHHHHHHHHHHHHHHHHH
Confidence 995 58999999999999999987643
No 301
>PRK12403 putative aminotransferase; Provisional
Probab=99.82 E-value=2.8e-17 Score=157.40 Aligned_cols=351 Identities=16% Similarity=0.158 Sum_probs=204.6
Q ss_pred ccCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCC-CC-C-CCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCC
Q 014936 32 KNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFN-GY-A-PTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSG 108 (415)
Q Consensus 32 ~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~-~y-~-~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g 108 (415)
.+|+.++||..|.-....+. .+|.+.+++++++....+. .+ . ......+|.+.+++++ + ...+.++++++
T Consensus 51 ~dG~~ylD~~~g~~~~~lGh-~hp~v~~A~~~q~~~~~~~~~~~~~~~~~~~~lae~L~~~~----p--~~~~~v~f~~S 123 (460)
T PRK12403 51 NDGKRYLDGMSGLWCTNLGY-GRKDLAAAAARQMEQLPYYNMFFHTTHPAVIELSELLFSLL----P--GHYSHAIYTNS 123 (460)
T ss_pred CCCCEEEECchhHHhhcCCC-CCHHHHHHHHHHHHhCCCeecccccCCHHHHHHHHHHHHhC----C--CCcCEEEEeCC
Confidence 34788999877742212222 5799999999998753211 11 1 1112334555555543 2 12368999999
Q ss_pred hHHHHHHHHHHhc-------CCCC-EEEEcCCCCcchHHHHHh-CCCe-----------EEEeeccCC--CCCCC-----
Q 014936 109 CTQAIDVAMALLS-------RPGA-NILLPRPGFPIYELSAAF-RHIE-----------VRHFDLLPD--KGWEV----- 161 (415)
Q Consensus 109 ~~~al~~~~~~l~-------~~gd-~vi~~~p~y~~~~~~~~~-~g~~-----------~~~~~~~~~--~~~~~----- 161 (415)
|++|++.+++... ++++ .|+....+|++....+.. .|.. +..++.... ..+..
T Consensus 124 GseA~e~AiklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~~~s~s~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 203 (460)
T PRK12403 124 GSEANEVLIRTVRRYWQVLGKPQKKIMIGRWNGYHGSTLAATALGGMKFMHEMGGLIPDVAHIDEPYWYANGGELTPAEF 203 (460)
T ss_pred cHHHHHHHHHHHHHHHHhhCCCCCcEEEEECCCcCcccHhhhhcCCCccccccCCCCCCCEEeCCCcccccccCCChHHH
Confidence 9999999999874 2333 355556677765443322 2211 111211000 00001
Q ss_pred ---ChhHHHhhcC---CCceEEEecCC-CCccccC-CCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCC
Q 014936 162 ---DLDDIESLAD---QNTVALVIINP-GNPCGNV-YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS 233 (415)
Q Consensus 162 ---~~~~l~~~~~---~~~~~v~i~~p-~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~ 233 (415)
+++.+++.+. ....+.++..| ....|.+ .+.+.+++|.++|++||+++|.||++.++...|.... ...++.
T Consensus 204 ~~~~~~~le~~~~~~~~~~iaavI~Epv~g~gG~~~~~~~yl~~lr~lc~~~g~lLI~DEV~tGfGRtG~~~a-~e~~gv 282 (460)
T PRK12403 204 GRRAALQLEEKILELGAENVAGFVAEPFQGAGGMIFPPESYWPEIQRICRQYDVLLCADEVIGGFGRTGEWFA-HEHFGF 282 (460)
T ss_pred HHHHHHHHHHHHHHhCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCchhhh-hhhcCC
Confidence 1244554442 23455667777 4555765 5788899999999999999999999988766654322 122333
Q ss_pred CCCeEEEccCccccCCCC-ceEEEEEeeCCCCCCChHHHHHHHHhh-----ccccCCchhHHHHHHHHhhCCCcHHHHHH
Q 014936 234 TVPILTLGSLSKRWIVPG-WRLGWFVTTDPCGMFRKPKVVERMKKY-----FDILGDPATFIQAAVPSILQQPDEVFFKK 307 (415)
Q Consensus 234 ~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~a~~~~l~~~~~~~~~~ 307 (415)
.++++ +++|.+ ..| +.+|.+++++ ++.+.+... ...+++.+|++.+++.+.|+...++ .
T Consensus 283 ~PDiv---~~gK~l-ggG~~Piga~v~~~--------~i~~~~~~~~~~~~~~~T~~gnPl~~Aaala~L~~i~~~---~ 347 (460)
T PRK12403 283 EPDTL---SIAKGL-TSGYVPMGGLVLSK--------RIAEALVEQGGVFAHGLTYSGHPVAAAVAIANLKALRDE---G 347 (460)
T ss_pred CCCeE---EEcccc-cccccceEEEEECH--------HHHHHHhcCCCccccCCCCCCCHHHHHHHHHHHHHHHhc---c
Confidence 23333 479995 456 4899998864 576666421 1234568899999888888653222 1
Q ss_pred HHHHHH-HHHHHHHHHh----hcCCCCcCCCCCCCceEEEEecCccccCC--CCCH---HHHHHHHHhhcCeEEEcCCCC
Q 014936 308 TLNLLK-QSVDICYNKI----KEIPCISCPHKPEGSMAVMLKLNLSLLDD--IIDD---IDFCFKLAKEESVIILPGTAV 377 (415)
Q Consensus 308 ~~~~~~-~~~~~l~~~l----~~~~~~~~~~~p~~g~~~~~~l~~~~~~~--~~~~---~~~~~~ll~~~gi~v~~g~~~ 377 (415)
..++++ ++-+++.+.| ++.|.+. . ...-|++..+.+....... .... ...+...+.+.|+.+.+..
T Consensus 348 l~~~~~~~~g~~l~~~L~~l~~~~~~i~-~-vrG~Gl~~gie~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~~~~-- 423 (460)
T PRK12403 348 VVTRVKDDTGPYLQRCLREVFGDHPLVG-E-VQGAGLVAALQFAEDKATRKRFANENDLAWRCRTIGFEEGVIIRSTL-- 423 (460)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCEE-e-EeecceEEEEEEccCccccccccchhHHHHHHHHHHHhCCEEEEecC--
Confidence 233442 3444444444 3443322 1 3455777777663211000 0001 1112233456799997532
Q ss_pred CCCCeEEEEee--CChhhHHHHHHHHHHHHHHHHHHh
Q 014936 378 GLKNWLRVTFA--VDPYSLEECLDRIKSFYQRHAKQL 412 (415)
Q Consensus 378 ~~~~~iRi~~~--~~~~~l~~~l~~l~~~~~~~~~~~ 412 (415)
+.+|++.. .++++++++++.|.+++.++.+++
T Consensus 424 ---~~~~l~Ppl~it~~eid~~~~~l~~al~~~~~~~ 457 (460)
T PRK12403 424 ---GRMIMAPALVAGRAEIDELVDKTRIAVDRTAREV 457 (460)
T ss_pred ---CEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHh
Confidence 45888885 499999999999999999887654
No 302
>PRK05965 hypothetical protein; Provisional
Probab=99.82 E-value=2e-17 Score=158.36 Aligned_cols=350 Identities=14% Similarity=0.093 Sum_probs=212.4
Q ss_pred ccCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHH
Q 014936 32 KNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQ 111 (415)
Q Consensus 32 ~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~ 111 (415)
.+++.++|+..|.-....+ -.+|++.+++++++....+. ........+.+..+|+.+.+..+ ...+.++++++|++
T Consensus 43 ~dG~~ylD~~~g~~~~~lG-h~~p~i~~Ai~~q~~~~~~~-~~~~~~~~~~~~~lae~L~~~~p--~~~~~v~f~~sGSE 118 (459)
T PRK05965 43 ASGHQLLDAFAGLWCVNVG-YGQESIVEAAAEQMRELPYA-TGYFHFGSEPAIRLAAKLAERAP--GSLNHVYFTLGGSD 118 (459)
T ss_pred CCCCEEEECcccHHhccCC-CCCHHHHHHHHHHHHhcCCc-ccccccCCHHHHHHHHHHHhhCC--CCcCEEEEeCChhH
Confidence 3588999997774221111 24799999999998753221 00000112333445555543221 23468999999999
Q ss_pred HHHHHHHHhcC-------CC-CEEEEcCCCCcchHHHHHhC-CC------------eEEEeeccCCC--CCCCC------
Q 014936 112 AIDVAMALLSR-------PG-ANILLPRPGFPIYELSAAFR-HI------------EVRHFDLLPDK--GWEVD------ 162 (415)
Q Consensus 112 al~~~~~~l~~-------~g-d~vi~~~p~y~~~~~~~~~~-g~------------~~~~~~~~~~~--~~~~~------ 162 (415)
|++.+++.... ++ .+|+....+|++....+... +. .+..++..... .+..|
T Consensus 119 Ave~AlKlAr~~~~~~g~~~r~kii~~~~~YHG~t~~a~s~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (459)
T PRK05965 119 AVDSAVRFIRHYWNATGRPSKKQFISLERGYHGSSSVGAGLTALPAFHRGFDLPLPWQHKIPSPYPYRNPVGDDPQAIIA 198 (459)
T ss_pred HHHHHHHHHHHHHHhcCCCCccEEEEecCCcCcccHHHHHhcCCchhhcccCCCCCCCEEcCCCcccccccCCChHHHHH
Confidence 99999987541 22 57999999999865433221 11 01122211000 00112
Q ss_pred --hhHHHhhcCC---CceEEEecCC-CCccccC-CCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCC
Q 014936 163 --LDDIESLADQ---NTVALVIINP-GNPCGNV-YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTV 235 (415)
Q Consensus 163 --~~~l~~~~~~---~~~~v~i~~p-~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~ 235 (415)
++.+++.+.. ...+.+|..| +...|.+ .|.+.++++.++|++||+++|.||++.++...|... ....++..+
T Consensus 199 ~~~~~l~~~i~~~~~~~iAAvIvEPiqg~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~tGfGRtG~~~-a~~~~gv~P 277 (459)
T PRK05965 199 ASVAALRAKVAELGADNVAAFFCEPIQGSGGVIVPPKGWLKAMREACRELGILFVADEVITGFGRTGPLF-ACEAEGVVP 277 (459)
T ss_pred HHHHHHHHHHHhcCCCceEEEEEeccccCCCCccCCHHHHHHHHHHHHHcCCEEEEechhccCccCchhh-hHhhcCCCC
Confidence 2456666642 3456677777 5556664 688899999999999999999999999987666432 222333333
Q ss_pred CeEEEccCccccCCCC-ceEEEEEeeCCCCCCChHHHHHHHHhh--------ccccCCchhHHHHHHHHhhCCCcHHHHH
Q 014936 236 PILTLGSLSKRWIVPG-WRLGWFVTTDPCGMFRKPKVVERMKKY--------FDILGDPATFIQAAVPSILQQPDEVFFK 306 (415)
Q Consensus 236 ~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~a~~~~l~~~~~~~~~ 306 (415)
.++ +++|.+ ..| +++|.+++++ ++.+.+... ...+++.++++.+++.+.|+...+ +
T Consensus 278 Div---~~gKgl-~gG~~Pi~av~~~~--------~i~~~~~~~~~~~~~~~h~~T~~gnpl~~Aaa~a~L~~l~~---~ 342 (459)
T PRK05965 278 DLM---TVAKGL-TSGYVPMGAVLMSD--------HVYQGIADGAGAAAPVGHGYTYSAHPVSAAVGLEVLRLYHE---G 342 (459)
T ss_pred CeE---Eechhh-ccCCcceeEEEEcH--------HHHHHHhccccccccccccCCCCCCHHHHHHHHHHHHHHHh---c
Confidence 344 568995 557 5999999975 677666421 223567899999988888865322 2
Q ss_pred HHHHHHHHHHHHHHHHhhcC---CCCcCCCCCCCceEEEEecCccc-cCCC-C---C-HHHHHHHHHhhcCeEEEcCCCC
Q 014936 307 KTLNLLKQSVDICYNKIKEI---PCISCPHKPEGSMAVMLKLNLSL-LDDI-I---D-DIDFCFKLAKEESVIILPGTAV 377 (415)
Q Consensus 307 ~~~~~~~~~~~~l~~~l~~~---~~~~~~~~p~~g~~~~~~l~~~~-~~~~-~---~-~~~~~~~ll~~~gi~v~~g~~~ 377 (415)
+..++.++.-+++.+.|+++ |.+. ....-|+++-+.+.... .... . . ...+... +.++||.+.+..
T Consensus 343 ~l~~~~~~~g~~l~~~l~~l~~~~~v~--~vrG~Gl~~gie~~~~~~~~~~~~~~~~~~~~i~~~-~~~~Gll~~~~g-- 417 (459)
T PRK05965 343 GLLANGQKAGPRFAAGLDALRAHPLVG--DVRGRGLLGALELVADKATKTPFDAALDPADRIFDR-AYANGLVFRAFG-- 417 (459)
T ss_pred cHHHHHHHHHHHHHHHHHhhccCCCEE--EEeecceEEEEEEeccccccCCCCchhHHHHHHHHH-HHhCCeEEEecC--
Confidence 34455555556666666553 3222 13445666666663211 0000 0 0 2234444 456799997632
Q ss_pred CCCCeEEEEe--eCChhhHHHHHHHHHHHHHHH
Q 014936 378 GLKNWLRVTF--AVDPYSLEECLDRIKSFYQRH 408 (415)
Q Consensus 378 ~~~~~iRi~~--~~~~~~l~~~l~~l~~~~~~~ 408 (415)
...+|+.+ ..+++++++++++|.++++++
T Consensus 418 --~~~i~~~PpL~it~~ei~~~~~~l~~~l~~~ 448 (459)
T PRK05965 418 --DGVLGFAPALCCTEGEFDLIFERTRKTLDDV 448 (459)
T ss_pred --CcEEEEECCCcCCHHHHHHHHHHHHHHHHHH
Confidence 36789987 478999999999999999875
No 303
>PRK06082 4-aminobutyrate aminotransferase; Provisional
Probab=99.82 E-value=4.4e-17 Score=155.90 Aligned_cols=349 Identities=15% Similarity=0.096 Sum_probs=209.0
Q ss_pred cCcceeEecccCCCCCCCCC-CcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHH
Q 014936 33 NEKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQ 111 (415)
Q Consensus 33 ~~~~~i~l~~g~~~~~~~~~-~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~ 111 (415)
+|+.++||..+.. ..++ .+|.+.+++.+++....+. ......+.+..+++.+.+..+ ...+.+++++++++
T Consensus 70 dG~~ylD~~g~~~---~~lGh~~p~v~~Ai~~ql~~~~~~---~~~~~~~~~~~lae~L~~~~p--~~~~~v~f~~sGse 141 (459)
T PRK06082 70 DGKKYMDFHGNNV---HQLGYGHPHVIEKVKEQMAKLPFS---PRRFTNETAIECAEKLTEIAG--GELNRVLFAPGGTS 141 (459)
T ss_pred CCCEEEEcccHhh---cccCCCCHHHHHHHHHHHHhCCCc---cCccCCHHHHHHHHHHHHhCC--CCCCEEEECCCcHH
Confidence 4778889863321 1233 6899999999998753221 111112444455555544332 12368999999999
Q ss_pred HHHHHHHHhc--CCCCEEEEcCCCCcchHHHHHhC-CCe------------EEEeeccCC--CCCC-C------ChhHHH
Q 014936 112 AIDVAMALLS--RPGANILLPRPGFPIYELSAAFR-HIE------------VRHFDLLPD--KGWE-V------DLDDIE 167 (415)
Q Consensus 112 al~~~~~~l~--~~gd~vi~~~p~y~~~~~~~~~~-g~~------------~~~~~~~~~--~~~~-~------~~~~l~ 167 (415)
|++.+++... ....+|+....+|++....+... |.. +..++.... ..+. . +++.++
T Consensus 142 Ave~AlklAr~~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 221 (459)
T PRK06082 142 AIGMALKLARHITGNFKVVSLWDSFHGASLDAISVGGEACFRQGMGPLMAGVERIPPAVSYRGAFPDADGSDVHYADYLE 221 (459)
T ss_pred HHHHHHHHHHHhcCCCEEEEEeCCCcCccHHHHhhcCCcccccCCCCCCCCCEEeCCCcccccccCChhHHHHHHHHHHH
Confidence 9999998764 12267888888888765433322 211 111221000 0010 0 134566
Q ss_pred hhcCC-CceEEEecCC-CCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCcc
Q 014936 168 SLADQ-NTVALVIINP-GNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSK 245 (415)
Q Consensus 168 ~~~~~-~~~~v~i~~p-~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK 245 (415)
+.++. ...+.+|..| ++..+...+.+.++++.++|++||+++|.||++.++...|.... ...++..++++ +++|
T Consensus 222 ~~i~~~~~vAavIvEPv~g~g~~~~~~~yl~~lr~lc~~~g~llI~DEV~tG~GRtG~~fa-~e~~gv~PDiv---~~gK 297 (459)
T PRK06082 222 YVIEKEGGIGAFIAEAVRNTDVQVPSKAYWKRVREICDKHNVLLIIDEIPNGMGRTGEWFT-HQAYGIEPDIL---CIGK 297 (459)
T ss_pred HHHhcCCCEEEEEECCccCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchhhH-hHhhCCCCCEE---Eecc
Confidence 66642 2455677777 44445567889999999999999999999999998765554321 12233333334 4799
Q ss_pred ccCCCCceEEEEEeeCCCCCCChHHHHHHHHhh-ccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhh
Q 014936 246 RWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKY-FDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIK 324 (415)
Q Consensus 246 ~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~ 324 (415)
.++.+.+++|.+++++ ++....... ...+...++++.+++.+.|+...+ ++..++++++-+++.+.|+
T Consensus 298 gl~gG~~P~~av~~~~--------~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l~~---~~l~~~~~~~g~~l~~~L~ 366 (459)
T PRK06082 298 GLGGGLVPIAAMITKD--------KYNTAAQISLGHYTHEKSPLGCAAALATIEVIEQ---EGLLEKVKADSQFMRERLL 366 (459)
T ss_pred cccCCCCcceEEEEcH--------HHHhhccCCCCCCCCCcCHHHHHHHHHHHHHHHh---cCHHHHHHHHHHHHHHHHH
Confidence 9654336999999865 444332211 124667889988888888864321 1344555566666666665
Q ss_pred c----CCCCcCCCCCCCceEEEEecCccccCCCCC---HHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEe--eCChhhHH
Q 014936 325 E----IPCISCPHKPEGSMAVMLKLNLSLLDDIID---DIDFCFKLAKEESVIILPGTAVGLKNWLRVTF--AVDPYSLE 395 (415)
Q Consensus 325 ~----~~~~~~~~~p~~g~~~~~~l~~~~~~~~~~---~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~--~~~~~~l~ 395 (415)
+ .|.+. ....-|+++.+.+.........+ ...+...+ .++||.+.+.. .+.+|++. ..++++++
T Consensus 367 ~l~~~~~~i~--~vrG~Gl~~~ve~~~~~~~~~~~~~~~~~~~~~~-~~~Gvl~~~~~----~~~i~~~Ppl~it~~eid 439 (459)
T PRK06082 367 EMKAKYPLIG--DVRGIGLLWGVELVTDRHTKERAYDEAEAVLYRC-LNNGLSFKVSQ----GNVIQLSPPLIITREELT 439 (459)
T ss_pred HHHhhCCCee--eeeeccceeEEEEccCccccCccHHHHHHHHHHH-HhCCCEEEecC----CCEEEEeCCCccCHHHHH
Confidence 4 33222 13445777777664211000001 22344444 56799987632 37899997 46999999
Q ss_pred HHHHHHHHHHHHHHHH
Q 014936 396 ECLDRIKSFYQRHAKQ 411 (415)
Q Consensus 396 ~~l~~l~~~~~~~~~~ 411 (415)
++++++.+++.++.+.
T Consensus 440 ~~~~~l~~~l~~~~~~ 455 (459)
T PRK06082 440 QALAILEEAIAKICQD 455 (459)
T ss_pred HHHHHHHHHHHHHhhh
Confidence 9999999999887554
No 304
>PRK07986 adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated
Probab=99.82 E-value=1.1e-17 Score=158.38 Aligned_cols=341 Identities=15% Similarity=0.096 Sum_probs=211.2
Q ss_pred ccCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHH
Q 014936 32 KNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQ 111 (415)
Q Consensus 32 ~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~ 111 (415)
.+++.++|+..|.-....+ -.+|.+.+++++++....+..... ...+.+..+|+.+.+..+ ...+.++++++|++
T Consensus 40 ~dG~~ylD~~~g~~~~~lG-h~~p~i~~Ai~~q~~~~~~~~~~~--~~~~~~~~la~~L~~~~p--~~~~~v~f~~SGsE 114 (428)
T PRK07986 40 ADGRRLVDGMSSWWAAIHG-YNHPQLNAAMKSQIDAMSHVMFGG--ITHPPAIELCRKLVAMTP--QPLECVFLADSGSV 114 (428)
T ss_pred CCCCEEEEcchhHHhhcCC-CCCHHHHHHHHHHHhhcCCccccc--cCCHHHHHHHHHHHhhCC--CCcCEEEEeCCcHH
Confidence 3588899998774221111 246899999999987533211111 112344555555544322 23469999999999
Q ss_pred HHHHHHHHhcC------CC-CEEEEcCCCCcchHHHHHhC-CC-------------eEEEeeccCCCCC-----CCChhH
Q 014936 112 AIDVAMALLSR------PG-ANILLPRPGFPIYELSAAFR-HI-------------EVRHFDLLPDKGW-----EVDLDD 165 (415)
Q Consensus 112 al~~~~~~l~~------~g-d~vi~~~p~y~~~~~~~~~~-g~-------------~~~~~~~~~~~~~-----~~~~~~ 165 (415)
|++.+++.... .| .+|+....+|++....+... +. .+..++.. ...+ .-|++.
T Consensus 115 Ave~AlklAr~~~~~~g~~r~kii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~~~~~~~d~~~ 193 (428)
T PRK07986 115 AVEVAMKMALQYWQAKGEPRQRFLTLRHGYHGDTFGAMSVCDPDNSMHSLYKGYLPENLFAPAP-QSRFDGEWDERDIAP 193 (428)
T ss_pred HHHHHHHHHHHHHHhcCCCCcEEEEECCCcCCCcHhhhcccCCchhhhhccCCCCCCCEEECCC-CcccchhhHHHHHHH
Confidence 99999987542 22 57999999998765443322 11 11112211 0010 124567
Q ss_pred HHhhcCC--CceEEEecCC--CCccccC-CCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEE
Q 014936 166 IESLADQ--NTVALVIINP--GNPCGNV-YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTL 240 (415)
Q Consensus 166 l~~~~~~--~~~~v~i~~p--~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~ 240 (415)
+++.++. ...+.++..| +...|.. .+.+.+++|.++|++||+++|+||++.++...|.... ...++..+.++
T Consensus 194 l~~~l~~~~~~iaavi~Epi~~g~gg~~~~~~~~L~~l~~lc~~~g~lLI~DEv~tG~GrtG~~fa-~~~~gv~PDi~-- 270 (428)
T PRK07986 194 FARLMAAHRHEIAAVILEPIVQGAGGMRIYHPEWLKRVRKLCDREGILLIADEIATGFGRTGKLFA-CEHAGIAPDIL-- 270 (428)
T ss_pred HHHHHHhCCCcEEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCCccCCCeee-ecccCCCCCEE--
Confidence 7776642 2345666666 4455654 5678999999999999999999999987654454321 12222222233
Q ss_pred ccCccccCCCC-ceEEEEEeeCCCCCCChHHHHHHHHhh------ccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHH
Q 014936 241 GSLSKRWIVPG-WRLGWFVTTDPCGMFRKPKVVERMKKY------FDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLK 313 (415)
Q Consensus 241 ~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~ 313 (415)
+++|.+ ..| +.+|.+++++ ++.+.+... ...+++.+|++.+++.+.|+...++ +..++++
T Consensus 271 -t~gK~l-~gG~~p~~av~~~~--------~i~~~~~~~~~~~~~~~~T~~g~p~~~aaa~a~L~~i~~~---~~~~~~~ 337 (428)
T PRK07986 271 -CLGKAL-TGGTMTLSATLTTR--------EVAETISNGEAGCFMHGPTFMGNPLACAVANASLSLLESG---DWQQQVA 337 (428)
T ss_pred -Eechhh-hCCcccCcchhchH--------HHHHHhhcCCCCccccCCCCCcCHHHHHHHHHHHHHHHhC---CHHHHHH
Confidence 589996 466 5888888865 677776542 2234567888888888888653221 3455666
Q ss_pred HHHHHHHHHhhcC---CCCcCCCCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEe--e
Q 014936 314 QSVDICYNKIKEI---PCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTF--A 388 (415)
Q Consensus 314 ~~~~~l~~~l~~~---~~~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~--~ 388 (415)
++.+++.+.|+++ +.+. . ...-|++.-+.+... .....+...+ .++||.+.+.. +.+|+.. .
T Consensus 338 ~~g~~l~~~l~~l~~~~~i~-~-vRg~Gl~~~ve~~~~-----~~~~~~~~~l-~~~Gl~~~~~g-----~~i~~~Ppl~ 404 (428)
T PRK07986 338 AIEAQLREELAPLRDAPMVA-D-VRVLGAIGVVETTRP-----VNMAALQRFF-VEQGVWIRPFG-----KLIYLMPPYI 404 (428)
T ss_pred HHHHHHHHHHHHHhcCCCEE-e-EeccceEEEEEeCCc-----ccHHHHHHHH-HHCCcEEEecC-----CEEEEeCCCC
Confidence 6666666666653 3222 1 234466766666431 1234455544 67799998742 5799977 5
Q ss_pred CChhhHHHHHHHHHHHHHH
Q 014936 389 VDPYSLEECLDRIKSFYQR 407 (415)
Q Consensus 389 ~~~~~l~~~l~~l~~~~~~ 407 (415)
.+++++++++++|.+++++
T Consensus 405 it~~ei~~~~~~l~~~l~~ 423 (428)
T PRK07986 405 ILPEQLQRLTAAVNRAVQD 423 (428)
T ss_pred CCHHHHHHHHHHHHHHHhh
Confidence 7999999999999999864
No 305
>PRK06062 hypothetical protein; Provisional
Probab=99.82 E-value=2.5e-17 Score=157.35 Aligned_cols=347 Identities=16% Similarity=0.110 Sum_probs=208.0
Q ss_pred ccCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHH
Q 014936 32 KNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQ 111 (415)
Q Consensus 32 ~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~ 111 (415)
.+++.++|+..|.-.... --.+|.+.+++++++....+. ... ...+.+..+|+.+.+..+ -..+.++++++|++
T Consensus 50 ~dG~~ylD~~~g~~~~~l-Gh~~p~v~~Ai~~q~~~~~~~--~~~-~~~~~~~~lae~L~~~~p--~~~~~v~f~~SGsE 123 (451)
T PRK06062 50 YEGRRYLDFSSQLVNTNI-GHQHPKVVAAIQEQAARLCTV--APA-HANDARSEAARLIAERAP--GDLSKVFFTNGGAD 123 (451)
T ss_pred CCCCEEEEcccCHHhhcC-CCCCHHHHHHHHHHHHhcCCc--CCc-cCCHHHHHHHHHHHHhCC--CCCCEEEEcCChHH
Confidence 358889999877522111 124789999999998753321 111 123444555555543222 12469999999999
Q ss_pred HHHHHHHHhcC-CC-CEEEEcCCCCcchHHHHHhCCC------------eEEEeeccCCC--CCC--CC-------hhHH
Q 014936 112 AIDVAMALLSR-PG-ANILLPRPGFPIYELSAAFRHI------------EVRHFDLLPDK--GWE--VD-------LDDI 166 (415)
Q Consensus 112 al~~~~~~l~~-~g-d~vi~~~p~y~~~~~~~~~~g~------------~~~~~~~~~~~--~~~--~~-------~~~l 166 (415)
|++.+++.... .| .+|+....+|++....+..... .+..++..... .+. -+ ++.+
T Consensus 124 Ave~AlklAr~~tgr~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l 203 (451)
T PRK06062 124 ANEHAVRMARLHTGRPKVLSAYRSYHGGTGSAINLTGDPRRWPNDTGRAGVVHFFGPFLYRSEFHATTEEEECERALAHL 203 (451)
T ss_pred HHHHHHHHHHHhhCCceEEEEeCCCCCCCHHHHhhcCCcccccCCCCCCCCEEeCCCCccccccCCCChHHHHHHHHHHH
Confidence 99999987641 22 5788899999887655433211 11111111000 010 12 5667
Q ss_pred HhhcCC---CceEEEecCC-CCccccC-CCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEc
Q 014936 167 ESLADQ---NTVALVIINP-GNPCGNV-YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLG 241 (415)
Q Consensus 167 ~~~~~~---~~~~v~i~~p-~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 241 (415)
++.++. ...+.++..| ....|.+ .|.+.++++.++|+++|+++|+||++.++...|... ....++..+. +.
T Consensus 204 e~~l~~~~~~~iAaviiEPv~g~gG~~~p~~~yl~~lr~lc~~~g~lLI~DEV~tGfGRtG~~~-a~~~~gv~PD---i~ 279 (451)
T PRK06062 204 ERVIELEGPSTIAAILLESVPGTAGILVPPPGYLAGVRELCDRHGIVLIADEVMAGFGRTGKWF-AIEHFGVVPD---LI 279 (451)
T ss_pred HHHHHhcCCCceEEEEEccccCCCCcccCCHHHHHHHHHHHHHcCCEEEeeccccCCCcCcHHH-HHHhcCCCCC---ee
Confidence 776642 3456677777 4455665 578889999999999999999999999875554321 1122222222 33
Q ss_pred cCccccCCCC-ceEEEEEeeCCCCCCChHHHHHHHHhh---ccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHH-
Q 014936 242 SLSKRWIVPG-WRLGWFVTTDPCGMFRKPKVVERMKKY---FDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSV- 316 (415)
Q Consensus 242 s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~- 316 (415)
+++|.+ ..| +++|.+++++ ++.+.+... ...+++.+|++.+++.+.|+...++ +..++.++.-
T Consensus 280 t~gK~l-ggG~~Pigav~~~~--------~i~~~~~~~~~~~~~T~~gnpl~~Aaa~a~L~~l~~~---~l~~~~~~~G~ 347 (451)
T PRK06062 280 TFAKGV-NSGYVPLGGVAISE--------AIAATFADRPYPGGLTYSGHPLACAAAVATINAMEEE---GIVENAARIGA 347 (451)
T ss_pred eechhh-hcCCcCcEEEEEcH--------HHHHHhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhc---CHHHHHHHHHH
Confidence 679995 456 5899999865 577766432 2235677899999888888653222 2333333333
Q ss_pred HHHHHHhh----cCCCCcCCCCCCCceEEEEecCcccc-C-CC-C------CHHHHHHHHHhhcCeEEEcCCCCCCCCeE
Q 014936 317 DICYNKIK----EIPCISCPHKPEGSMAVMLKLNLSLL-D-DI-I------DDIDFCFKLAKEESVIILPGTAVGLKNWL 383 (415)
Q Consensus 317 ~~l~~~l~----~~~~~~~~~~p~~g~~~~~~l~~~~~-~-~~-~------~~~~~~~~ll~~~gi~v~~g~~~~~~~~i 383 (415)
+++.+.|+ +.|.+. . ...-|+++-+.+..... . .. . ....+... +.++||.+.+. .+.+
T Consensus 348 ~~l~~~L~~l~~~~~~v~-~-vrG~Gl~~gve~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~Gvl~~~~-----~~~l 419 (451)
T PRK06062 348 EVLGPGLRELAERHPSVG-E-VRGLGVFWALELVADRETREPLAPYGASSAAMAAVKAA-CKERGLLPFVN-----GNRI 419 (451)
T ss_pred HHHHHHHHHHHhcCCcEE-e-EeccccEEEEEEcccccccCCCcccchhhHHHHHHHHH-HHHCCcEEeec-----CCEE
Confidence 23444443 343222 1 23446666666532110 0 00 0 02244444 45679998653 3579
Q ss_pred EEEe--eCChhhHHHHHHHHHHHHHHH
Q 014936 384 RVTF--AVDPYSLEECLDRIKSFYQRH 408 (415)
Q Consensus 384 Ri~~--~~~~~~l~~~l~~l~~~~~~~ 408 (415)
|+++ .++++++++++++|.++++++
T Consensus 420 rl~ppl~~t~~eid~~~~~l~~~l~~~ 446 (451)
T PRK06062 420 HVVPPCTVTEDEVREGLAILDAALAVA 446 (451)
T ss_pred EEECCccCCHHHHHHHHHHHHHHHHHh
Confidence 9988 579999999999999998754
No 306
>PRK06105 aminotransferase; Provisional
Probab=99.82 E-value=3.3e-17 Score=156.99 Aligned_cols=349 Identities=17% Similarity=0.142 Sum_probs=211.8
Q ss_pred ccCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCC-CCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChH
Q 014936 32 KNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKF-NGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCT 110 (415)
Q Consensus 32 ~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~-~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~ 110 (415)
.+|+.++||..|......+ -.+|++.+++++++....+ .... ....+.+.++++.+.+..+ ..-+.++++++|+
T Consensus 45 ~dG~~ylD~~~g~~~~~lG-h~~p~i~~Ai~~q~~~~~~~~~~~--~~~~~~~~~lae~L~~~~p--~~~~~v~f~~SGs 119 (460)
T PRK06105 45 DAGKRYIEGMAGLWSVALG-FSEQRLVEAAARQMKKLPFYHTFS--HKSHGPVIDLAEKLVAMAP--VPMSKVFFTNSGS 119 (460)
T ss_pred CCCCEEEEcchhHHhccCC-CCCHHHHHHHHHHHHhCCCeeccc--ccCCHHHHHHHHHHHHhCC--CCCCEEEEeCCcH
Confidence 4588999998774222211 2478999999999875321 1111 0112344445555543222 2236899999999
Q ss_pred HHHHHHHHHhc------C-CC-CEEEEcCCCCcchHHHHHhCCC-e------------EEEeeccCCCCCCC--------
Q 014936 111 QAIDVAMALLS------R-PG-ANILLPRPGFPIYELSAAFRHI-E------------VRHFDLLPDKGWEV-------- 161 (415)
Q Consensus 111 ~al~~~~~~l~------~-~g-d~vi~~~p~y~~~~~~~~~~g~-~------------~~~~~~~~~~~~~~-------- 161 (415)
+|++.+++... . +| .+|+....+|++....+..... . +..++.. +.+..
T Consensus 120 eAve~AlKlar~~~~~~g~t~r~~il~~~~~yHG~t~~a~s~t~~~~~~~~~~~~~~~~~~~~~p--~~~~~~~~~~~~~ 197 (460)
T PRK06105 120 EANDTVVKLVWYYNNALGRPEKKKIISRQRGYHGVTIASASLTGLPNNHRSFDLPLDRILHTGCP--HYYRFGLPGESEE 197 (460)
T ss_pred HHHHHHHHHHHHHHHhcCCCCCcEEEEecCccCCcchhheeccCCcccccccCCCCCCCEEcCCC--cccccccCCCChH
Confidence 99999999852 1 22 5788888888876544322111 1 1111111 10000
Q ss_pred -----ChhHHHhhcC---CCceEEEecCC-CCccccC-CCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCccccccc
Q 014936 162 -----DLDDIESLAD---QNTVALVIINP-GNPCGNV-YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVF 231 (415)
Q Consensus 162 -----~~~~l~~~~~---~~~~~v~i~~p-~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~ 231 (415)
.++++++.+. ....+.++..| +...|.. .|.+.++++.++|++||+++|.||++.++...|.... ...+
T Consensus 198 ~~~~~~~~~le~~~~~~~~~~iAavIvEPiqg~gG~~~~~~~yl~~lr~lc~~~~~llI~DEv~tG~GRtG~~f~-~~~~ 276 (460)
T PRK06105 198 AFATRLANELEALILAEGPDTIAAFIGEPVMGAGGVIVPPKTYWEKIQAVLRKYDILLVADEVICGFGRTGNMFG-CETF 276 (460)
T ss_pred HHHHHHHHHHHHHHHHcCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCeEEEeccccCCCcCchhhh-HHhc
Confidence 1345666552 23456677777 5555665 6889999999999999999999999987765554322 2223
Q ss_pred CCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhh--------ccccCCchhHHHHHHHHhhCCCcHH
Q 014936 232 GSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKY--------FDILGDPATFIQAAVPSILQQPDEV 303 (415)
Q Consensus 232 ~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~a~~~~l~~~~~~ 303 (415)
+..++++ +++|.++...+++|.+++++ ++.+.+... ...++..+|++..++.+.|+...+
T Consensus 277 ~v~PDi~---~~gK~lggG~~P~~av~~~~--------~i~~~~~~~~~~~~~~~h~~T~~gnpl~~aaa~a~L~~i~~- 344 (460)
T PRK06105 277 GIKPDIL---VMSKQLSSSYQPLSAVLMNE--------KVYDPIADESGKIGTFGHGFTASGHPVAAAVALENLAIIEE- 344 (460)
T ss_pred CCCCCee---eeecccccCcccceEEEEcH--------HHHHHHhcccccCcccccCCCCCCCHHHHHHHHHHHHHHHh-
Confidence 3322233 67999654336899999865 677766531 123567888998888888765322
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcC---CCCcCCCCCCCceEEEEecCcccc--CCCCC----HHHHHHHHHhhcCeEEEcC
Q 014936 304 FFKKTLNLLKQSVDICYNKIKEI---PCISCPHKPEGSMAVMLKLNLSLL--DDIID----DIDFCFKLAKEESVIILPG 374 (415)
Q Consensus 304 ~~~~~~~~~~~~~~~l~~~l~~~---~~~~~~~~p~~g~~~~~~l~~~~~--~~~~~----~~~~~~~ll~~~gi~v~~g 374 (415)
++..++.++.-+++.+.|+++ |.+. . ...-|.+.-+++..... ..... ...+... +.++||.+.+.
T Consensus 345 --~~l~~~v~~~g~~l~~~L~~l~~~~~v~-~-vrG~Gl~~gie~~~~~~~~~~~~~~~~~a~~i~~~-~~~~Gvl~~~~ 419 (460)
T PRK06105 345 --RDLVGNAAERGARLQARLRALADHPLVG-E-VRGVGLIAAVELVADKATKTPFEPPGKVGARANAA-AHEHGVISRAM 419 (460)
T ss_pred --ccHHHHHHHHHHHHHHHHHHhhcCCCeE-E-EEecceEEEEEEecCcccCCCCCchhHHHHHHHHH-HHHCCeEEEec
Confidence 134455555555555555543 3222 1 23446666666632110 00000 1234444 45779999873
Q ss_pred CCCCCCCeEEEEee--CChhhHHHHHHHHHHHHHHHHH
Q 014936 375 TAVGLKNWLRVTFA--VDPYSLEECLDRIKSFYQRHAK 410 (415)
Q Consensus 375 ~~~~~~~~iRi~~~--~~~~~l~~~l~~l~~~~~~~~~ 410 (415)
.+.+|++.. .+++++++++++|.++++++..
T Consensus 420 -----g~~i~l~Ppl~it~~eid~~~~~l~~~l~~~~~ 452 (460)
T PRK06105 420 -----GDTLAFCPPLIITAAQVDEMVDRFGRALDDVAA 452 (460)
T ss_pred -----CCEEEEECCCccCHHHHHHHHHHHHHHHHHHHH
Confidence 257999985 5899999999999999987654
No 307
>COG1103 Archaea-specific pyridoxal phosphate-dependent enzymes [General function prediction only]
Probab=99.82 E-value=2.2e-17 Score=138.13 Aligned_cols=323 Identities=14% Similarity=0.155 Sum_probs=212.7
Q ss_pred CCcHHHHHHHHHHHhcCCCCCCC--------CCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCC
Q 014936 52 HTTHVATEAVAEALLSEKFNGYA--------PTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRP 123 (415)
Q Consensus 52 ~~~~~~~~a~~~~~~~~~~~~y~--------~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~ 123 (415)
..+++.++|+-+.-+.-....|. ..+-+..+.+.+++|+ .-|.+-+|+|+.++=.+++.+++++
T Consensus 28 iLt~eArkal~E~gDGYSvCD~C~~Grldei~kPpI~~F~~dlaeFl--------g~D~~R~t~GARe~KfavMhal~~~ 99 (382)
T COG1103 28 ILTEEARKALLEWGDGYSVCDFCLEGRLDEITKPPIKDFLEDLAEFL--------GMDEVRVTAGAREAKFAVMHALCKE 99 (382)
T ss_pred cCCHHHHHHHHHhcCCcchhhhhccCccccccCCcHHHHHHHHHHHh--------CCceeeecccchhhHHHHHHHhccC
Confidence 45677888887764431111221 1123567888899998 5789999999999999999999999
Q ss_pred CCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcC----C---CceEEEecCCCCccccCCCHHHHH
Q 014936 124 GANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLAD----Q---NTVALVIINPGNPCGNVYSYQHLQ 196 (415)
Q Consensus 124 gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~----~---~~~~v~i~~p~nptG~~~~~~~l~ 196 (415)
||.|+++..+|+...-+++..|+++..+|....-.+.+++|...+.++ + .+.+.++++|...-|.. .+-+
T Consensus 100 gd~vV~D~~aHYttyvAAEragl~v~eVp~tg~Pey~i~~e~y~~viee~~~~~g~~~~lallTh~Dg~YGNl---~Dak 176 (382)
T COG1103 100 GDWVVVDSLAHYTTYVAAERAGLNVAEVPNTGYPEYKITPEGYAEVIEEVKDEGGDPPALALLTHVDGEYGNL---ADAK 176 (382)
T ss_pred CCEEEEcCcchHHHHHHHHhcCCeEEecCCCCCCceEecHHHHHHHHHHHHhccCCCceEEEEeccCCCcCCc---hhhH
Confidence 999999999999999999999999999997655568888887665553 2 25667899987767777 7899
Q ss_pred HHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHH
Q 014936 197 KLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMK 276 (415)
Q Consensus 197 ~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~ 276 (415)
+++++|++++++++..++|.. |..+.+....+.+ ++++|-+|++ ++.-++|.+..+. ++.+..-
T Consensus 177 kva~ic~e~gvPlllN~AYt~----Grmpvs~ke~g~D---FiVgSGHKsm-AAs~PiGvl~~~e--------E~ae~V~ 240 (382)
T COG1103 177 KVAKICREYGVPLLLNCAYTV----GRMPVSGKEIGAD---FIVGSGHKSM-AASAPIGVLAMSE--------EWAEIVL 240 (382)
T ss_pred HHHHHHHHcCCceEeecceee----ccccccccccCCC---EEEecCccch-hccCCeeEEeehh--------HHHHHHH
Confidence 999999999999999999987 4455555556655 8889999995 5555789988765 3333321
Q ss_pred hhc---------cccCCc-hhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCC-CCCCceEEEEec
Q 014936 277 KYF---------DILGDP-ATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPH-KPEGSMAVMLKL 345 (415)
Q Consensus 277 ~~~---------~~~~~~-~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~-~p~~g~~~~~~l 345 (415)
... .+-++. -......+.+.+-. -...-++.+.--+.++++.+.|+++.|+.... .|..- -++.+
T Consensus 241 r~Sg~~~~~KEvellGCT~rGapivTlmASfP~--V~eRVkrWdeEv~kaR~fv~elEkigg~~qlG~rPk~H--dLm~F 316 (382)
T COG1103 241 RRSGRAFPKKEVELLGCTVRGAPIVTLMASFPH--VVERVKRWDEEVEKARWFVAELEKIGGVKQLGERPKNH--DLMKF 316 (382)
T ss_pred hhcccccccceeeeecccccCchHHHHHhcCHH--HHHHHHHHHHHHHHHHHHHHHHHHhhhHHHhCCCCccc--ceeee
Confidence 111 011111 00111111111110 01111223333456778899999886665332 23332 22223
Q ss_pred CccccCCC----CCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEe-eCChhhHHHHHHHHHHHHHHH
Q 014936 346 NLSLLDDI----IDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTF-AVDPYSLEECLDRIKSFYQRH 408 (415)
Q Consensus 346 ~~~~~~~~----~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~-~~~~~~l~~~l~~l~~~~~~~ 408 (415)
..+.+..+ ....-|+.+-|++.||. |.-.+...++.+|+ +.+.|+++..++.++++++++
T Consensus 317 etp~f~eIakk~~r~gyFlY~ELK~RgI~---GI~~G~Tk~~K~svyGl~~Eqve~V~~afkeI~eky 381 (382)
T COG1103 317 ETPVFHEIAKKHKRKGYFLYEELKKRGIH---GIQPGQTKYFKLSVYGLSWEQVEYVVDAFKEIAEKY 381 (382)
T ss_pred cCchHHHHHHhCcCCceeeHHHHHhcCcc---ccccCceeEEEEEeecCCHHHHHHHHHHHHHHHHhc
Confidence 32211000 01112334445677775 33334468999999 899999999999999998764
No 308
>PRK06173 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.82 E-value=2.6e-17 Score=156.06 Aligned_cols=344 Identities=13% Similarity=0.104 Sum_probs=210.2
Q ss_pred ccCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHH
Q 014936 32 KNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQ 111 (415)
Q Consensus 32 ~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~ 111 (415)
.+++.++|+..|.-.... --.+|++.+++++++.+..+.... .-..+.+..+|+.+....+ ...+.++++++|++
T Consensus 41 ~dG~~ylD~~~g~~~~~l-Gh~~p~v~~ai~~q~~~~~~~~~~--~~~~~~~~~lae~L~~~~p--~~~~~v~f~~sGse 115 (429)
T PRK06173 41 KDGRRLIDGMSSWWAALH-GYNHPRLNAAATNQLAKMSHIMFG--GFTHEPAVELAQKLLEILP--PSLNKIFFADSGSV 115 (429)
T ss_pred CCCCEEEEccchHHhccC-CCCCHHHHHHHHHHHHhcCCcccc--ccCCHHHHHHHHHHHhhCC--CCcCEEEEeCCchH
Confidence 358889999776421111 124699999999988753221110 0012333444444433222 23469999999999
Q ss_pred HHHHHHHHhcC-------CC-CEEEEcCCCCcchHHHHHhC-CC-------------eEEEeeccCCCCC-----CCChh
Q 014936 112 AIDVAMALLSR-------PG-ANILLPRPGFPIYELSAAFR-HI-------------EVRHFDLLPDKGW-----EVDLD 164 (415)
Q Consensus 112 al~~~~~~l~~-------~g-d~vi~~~p~y~~~~~~~~~~-g~-------------~~~~~~~~~~~~~-----~~~~~ 164 (415)
|++.+++.... +| .+|+....+|++....+... +. .+..++.. ...+ .-+++
T Consensus 116 Ave~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~~~~~~~~l~ 194 (429)
T PRK06173 116 AVEVAMKMALQYQQAKGEVQRTKFATIRSGYHGDTWHAMSVCDPVTGMHGLFNHSLPVQYFLPQP-SIKFGEEWNDEAIE 194 (429)
T ss_pred HHHHHHHHHHHHHHHhCCCCCcEEEEECCCcCCcchhhhccCCCchhhhhcccccCCCCeEeCCC-CcccchhHHHHHHH
Confidence 99999987541 23 57889999998854332211 10 01112211 0000 01355
Q ss_pred HHHhhcC--CCceEEEecCC--CCccccC-CCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEE
Q 014936 165 DIESLAD--QNTVALVIINP--GNPCGNV-YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILT 239 (415)
Q Consensus 165 ~l~~~~~--~~~~~v~i~~p--~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~ 239 (415)
.+++.+. ....+.++..| +...|.. .|.+.++++.++|++||+++|+||++.++...|.... ...++..+.++
T Consensus 195 ~l~~~i~~~~~~iAAvi~EPi~qg~gG~~~~~~~yl~~l~~lc~~~g~llI~DEv~tG~GrtG~~~a-~~~~gv~PDiv- 272 (429)
T PRK06173 195 PLQDLLEQKGDEIAALILEPVVQGAGGMYFYSPTYLVKARELCDQYGVLLIFDEIATGFGRTGKLFA-LEHAGVVPDIM- 272 (429)
T ss_pred HHHHHHHhCCCcEEEEEEcchhhccCCcccCCHHHHHHHHHHHHHcCCeEEecchhcCCCcCCcchH-HHhcCCCCCEE-
Confidence 6667664 23456677777 5666765 7889999999999999999999999977654454321 12222222233
Q ss_pred EccCccccCCCC-ceEEEEEeeCCCCCCChHHHHHHHHh-----h-ccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHH
Q 014936 240 LGSLSKRWIVPG-WRLGWFVTTDPCGMFRKPKVVERMKK-----Y-FDILGDPATFIQAAVPSILQQPDEVFFKKTLNLL 312 (415)
Q Consensus 240 ~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~-----~-~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~ 312 (415)
+++|.+ ..| +.++.++.++ ++.+.+.. . ...++..++++.+++.+.|+...++ ...+++
T Consensus 273 --~~gK~l-~gG~~p~~a~~~~~--------~i~~~~~~~~~~~~~~~~T~~g~p~~~aaa~a~l~~i~~~---~~~~~~ 338 (429)
T PRK06173 273 --CIGKAL-TGGYLTLSATITTE--------AIAQTICSGEAKCFMHGPTFMANPLACAIAAESIRLLLES---PWQQNI 338 (429)
T ss_pred --Eeehhh-hCCccccceEEecH--------HHHHHHhcCCCCccccCCCCCcCHHHHHHHHHHHHHHHhC---CHHHHH
Confidence 489996 466 5788888765 56676642 1 1123457888888888888642211 345666
Q ss_pred HHHHHHHHHHhhcCCCCcCC-CCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEee--C
Q 014936 313 KQSVDICYNKIKEIPCISCP-HKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFA--V 389 (415)
Q Consensus 313 ~~~~~~l~~~l~~~~~~~~~-~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~--~ 389 (415)
+++-+++.+.|+++.+...+ .....|+++-+.+... .....+... +.++||.+.+.. +.+|+... .
T Consensus 339 ~~~g~~l~~~L~~~~~~~~v~~vRg~Gl~~~iel~~~-----~~~~~i~~~-l~e~Gi~v~~~g-----~~l~~~Ppl~i 407 (429)
T PRK06173 339 QRIEAQLKQELAPAAEFDSVAEVRVLGAIGVVEMKEP-----VNMATLQPR-FVEHGIWVRPFG-----KLVYIMPPFII 407 (429)
T ss_pred HHHHHHHHHHHHHhhcCCCeeeeeccceEEEEEeCCc-----ccHHHHHHH-HHHCCeEEEecC-----CEEEEeCCccC
Confidence 77777777777643222211 1224577776767531 123445554 466799997742 58999884 6
Q ss_pred ChhhHHHHHHHHHHHHHHH
Q 014936 390 DPYSLEECLDRIKSFYQRH 408 (415)
Q Consensus 390 ~~~~l~~~l~~l~~~~~~~ 408 (415)
+++++++++++|.+++.+.
T Consensus 408 t~~ei~~~~~~l~~~l~~~ 426 (429)
T PRK06173 408 SPDELSQLTSGLLRVLKQE 426 (429)
T ss_pred CHHHHHHHHHHHHHHHHHH
Confidence 8999999999999999753
No 309
>PLN03032 serine decarboxylase; Provisional
Probab=99.81 E-value=7.8e-17 Score=148.88 Aligned_cols=311 Identities=14% Similarity=0.082 Sum_probs=202.0
Q ss_pred HHHHHHHHHHHhcCCCC---CCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcE--EEeCChHHHHHHHHHHhc--CCCCEE
Q 014936 55 HVATEAVAEALLSEKFN---GYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDV--FVTSGCTQAIDVAMALLS--RPGANI 127 (415)
Q Consensus 55 ~~~~~a~~~~~~~~~~~---~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i--~i~~g~~~al~~~~~~l~--~~gd~v 127 (415)
....+++.+.+.+...+ .+.......++++.+.+++.+.+| .+++++ ++|+|||+++..++.+.. .++..|
T Consensus 37 ~~~~~~~~~~~~~~~gnP~s~~~~g~~a~~~e~~v~~~ia~llg--~~~~~~~G~fTsGGTEaNl~al~~ar~~~~~~~v 114 (374)
T PLN03032 37 YGELSQLMKYSINNLGDPFIESNYGVHSRQFEVGVLDWFARLWE--LEKDEYWGYITTCGTEGNLHGILVGREVFPDGIL 114 (374)
T ss_pred hHHHHHHHHhcccCCCCCcccCCCCccHHHHHHHHHHHHHHHhC--CCCccCCEEEeCchHHHHHHHHHHHHHhCCCcEE
Confidence 34566666665432111 111111336677777777766666 455666 999999999998887754 245689
Q ss_pred EEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCC---CceEEEecCCCCccccCCCHHHHHHHHHHHhh
Q 014936 128 LLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ---NTVALVIINPGNPCGNVYSYQHLQKLAETANK 204 (415)
Q Consensus 128 i~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~---~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~ 204 (415)
+++.-.|++....++..|.++..+|+++ ++.+|+++|++++++ ++.+++++..+|++|.+ +++++|+++|++
T Consensus 115 i~s~~~H~Sv~kaa~~lg~~~~~V~~d~--~g~id~~~L~~~i~~~~~~~~lvv~tagtt~tG~i---dpi~eI~~i~~~ 189 (374)
T PLN03032 115 YASRESHYSVFKAARMYRMEAVKVPTLP--SGEIDYDDLERALAKNRDKPAILNVNIGTTVKGAV---DDLDRILRILKE 189 (374)
T ss_pred EeCCCceeHHHHHHHHcCCCCeEeeeCC--CCcCcHHHHHHHHHHcCCCCEEEEEEecCcCCccC---CCHHHHHHHHHH
Confidence 9999999999999999999988888854 456999999999976 46677888889999999 778888899999
Q ss_pred cC-----cEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhhc
Q 014936 205 LK-----TLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYF 279 (415)
Q Consensus 205 ~~-----~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~ 279 (415)
+| +++++|.+++++...-....+...+.... .-+..|.+|.++ ....+|.++.++ ...+.+....
T Consensus 190 ~g~~~~~~~lHvDaA~gg~~~p~~~~~~~~~~~~~v-DSis~s~HK~~g-~P~g~G~ll~r~--------~~~~~~~~~~ 259 (374)
T PLN03032 190 LGYTEDRFYIHCDGALFGLMMPFVSRAPEVTFRKPI-GSVSVSGHKFLG-CPMPCGVALTRK--------KHVKALSQNV 259 (374)
T ss_pred hCCCCCCeeEEEEccchhhhhhccCCCcccCCCcCC-cEEEECcccccC-CCcCeEEEEEEc--------hhhHhhccCC
Confidence 86 58999999987543210000101111111 134558899854 334489998875 2333332110
Q ss_pred ------ccc--CCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCccccC
Q 014936 280 ------DIL--GDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLD 351 (415)
Q Consensus 280 ------~~~--~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~~ 351 (415)
..+ ++-+......+...|.....+.+.+..++..++++++.+.|++. ++..+..|... .+.++-+
T Consensus 260 ~Yl~~~d~ti~gSR~g~~~l~~w~~l~~~G~~g~~~~~~~~~~~a~~l~~~l~~~-~~~~~~~p~~~-~V~f~~~----- 332 (374)
T PLN03032 260 EYLNSRDATIMGSRNGHAPLYLWYTLRRKGYRGIKRDVQHCMRNAHYLKDRLTEA-GLTCRLNELSS-TVVFERP----- 332 (374)
T ss_pred cccCCCCCcccCCCchHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhC-CCcEEECCCce-EEEEcCC-----
Confidence 011 12222333444444555556888999999999999999999987 66655556543 3433332
Q ss_pred CCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEe--eCChhhHHHHHHHHHH
Q 014936 352 DIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTF--AVDPYSLEECLDRIKS 403 (415)
Q Consensus 352 ~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~--~~~~~~l~~~l~~l~~ 403 (415)
.... + . .|..+.+- .+++|+++ ..+.+.++++++.|++
T Consensus 333 ---~~~~----~-~-~~w~l~~~-----~~~~hi~vm~~~~~~~id~fi~dl~~ 372 (374)
T PLN03032 333 ---MDEA----F-I-KKWQLACE-----GDIAHVVVMPNVTVEKLDEFVEELVE 372 (374)
T ss_pred ---CcHh----H-h-heeeeccc-----CCEEEEEECCCCCHHHHHHHHHHHhc
Confidence 1111 2 2 25555432 35899999 3577888998888764
No 310
>PRK09221 beta alanine--pyruvate transaminase; Provisional
Probab=99.81 E-value=7e-17 Score=154.08 Aligned_cols=350 Identities=16% Similarity=0.125 Sum_probs=209.9
Q ss_pred ccCcceeEecccCCCCCCCCC-CcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChH
Q 014936 32 KNEKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCT 110 (415)
Q Consensus 32 ~~~~~~i~l~~g~~~~~~~~~-~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~ 110 (415)
.+++.++||..|.-... ++ .+|.+.+++++++..-.+ ++......+....+++.+.+..+ ...+.++++++|+
T Consensus 46 ~dG~~ylD~~~g~~~~~--lGh~~p~v~~ai~~ql~~l~~--~~~~~~~~~~~~~la~~L~~~~p--~~~~~v~f~~sGs 119 (445)
T PRK09221 46 ADGRKILDGTAGLWCCN--AGHGRPEIVEAVARQAATLDY--APAFQMGHPLAFELAERLAELAP--GGLDHVFFTNSGS 119 (445)
T ss_pred CCCCEEEEccccHhhcc--CCCCCHHHHHHHHHHHHhccC--ccccccCCHHHHHHHHHHHHhCC--CCCCEEEEeCCcH
Confidence 35889999987742221 22 578999999998875221 11100112334445555543222 1246899999999
Q ss_pred HHHHHHHHHhcC-------C-CCEEEEcCCCCcchHHHHHhCCC-------------eEEEeeccC---CCCCCC-----
Q 014936 111 QAIDVAMALLSR-------P-GANILLPRPGFPIYELSAAFRHI-------------EVRHFDLLP---DKGWEV----- 161 (415)
Q Consensus 111 ~al~~~~~~l~~-------~-gd~vi~~~p~y~~~~~~~~~~g~-------------~~~~~~~~~---~~~~~~----- 161 (415)
+|++.+++.... + -.+|+....+|++....+...+. .+..++... ...+..
T Consensus 120 eAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~gals~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (445)
T PRK09221 120 ESVDTALKIALAYHRARGQGTRTRLIGRERGYHGVGFGGISVGGIVNNRKMFGGLLPGVDHLPHTLDLPENAFSKGQPEH 199 (445)
T ss_pred HHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCccchhhhccCCChhhhhccCCCCCCCeEeCCCccccccccCCChHHH
Confidence 999999987541 1 24799999999876544322111 112222110 000000
Q ss_pred ---ChhHHHhhcCC---CceEEEecCC-CCccccC-CCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCC
Q 014936 162 ---DLDDIESLADQ---NTVALVIINP-GNPCGNV-YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS 233 (415)
Q Consensus 162 ---~~~~l~~~~~~---~~~~v~i~~p-~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~ 233 (415)
.++.+++.++. ...+.++..| ....|.. .+.+.++++.++|+++|+++|+||++.++...|.... ...++.
T Consensus 200 ~~~~~~~l~~~i~~~~~~~iAavi~Epv~g~~G~~~~~~~yl~~l~~lc~~~g~llI~DEV~tG~GRtG~~~~-~~~~gv 278 (445)
T PRK09221 200 GAELADDLERLVALHDASTIAAVIVEPMAGSAGVLVPPKGYLQRLREICDKHGILLIFDEVITGFGRLGAAFA-AERFGV 278 (445)
T ss_pred HHHHHHHHHHHHHhcCCCcEEEEEEecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCCCcCchhhH-HHhcCC
Confidence 13466666642 3455666777 5566775 5778899999999999999999999987655554321 122222
Q ss_pred CCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhh--------ccccCCchhHHHHHHHHhhCCCcHHHH
Q 014936 234 TVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKY--------FDILGDPATFIQAAVPSILQQPDEVFF 305 (415)
Q Consensus 234 ~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~a~~~~l~~~~~~~~ 305 (415)
.+.+ .+++|.++...+++|.+++++ ++.+.+... ...+++.++++..++.+.|+...+
T Consensus 279 ~PDi---~~~gK~l~gG~~Pi~av~~~~--------~i~~~~~~~~~~~~~~~~~~T~~~~pl~~aaa~a~L~~i~~--- 344 (445)
T PRK09221 279 TPDI---ITFAKGLTNGAIPMGAVIASD--------EIYDAFMQGPEYAIEFFHGYTYSAHPVACAAGLATLDIYRE--- 344 (445)
T ss_pred CCCE---EEeccccccCcccceeeEEcH--------HHHHhhccCcccccccccccCCCcCHHHHHHHHHHHHHHHh---
Confidence 2222 367999644447899998865 566665321 123556788888888887764321
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCCCcCCC-CCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEE
Q 014936 306 KKTLNLLKQSVDICYNKIKEIPCISCPH-KPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLR 384 (415)
Q Consensus 306 ~~~~~~~~~~~~~l~~~l~~~~~~~~~~-~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iR 384 (415)
+...++.+++.+++.+.|+++.....+. ...-|++.-+.+............++...+ .++||.+.++. +.+|
T Consensus 345 ~~l~~~~~~~g~~l~~~l~~l~~~~~v~~vrg~Gl~~~v~~~~~~~~~~~~~~~~~~~~-~~~Gv~~~~~~-----~~lr 418 (445)
T PRK09221 345 EDLFERAAELAPYFEDAVHSLKGLPHVIDIRNIGLVAGIELAPRPGAPGARGYEAFMKC-FEKGLLVRYTG-----DTIA 418 (445)
T ss_pred ccHHHHHHHHHHHHHHHHHhhccCCCEEEEecCceEEEEEEecccccccchHHHHHHHH-HHCCeEEeecC-----CEEE
Confidence 2345677777777777776652221111 223455555555321110001123455554 56799997642 5799
Q ss_pred EEe--eCChhhHHHHHHHHHHHHHHH
Q 014936 385 VTF--AVDPYSLEECLDRIKSFYQRH 408 (415)
Q Consensus 385 i~~--~~~~~~l~~~l~~l~~~~~~~ 408 (415)
+++ ..+++++++++++|.+++.++
T Consensus 419 ~~Ppl~~t~~eid~~~~~l~~~l~~~ 444 (445)
T PRK09221 419 LSPPLIIEKAQIDELVDALGDALRAV 444 (445)
T ss_pred EECCccCCHHHHHHHHHHHHHHHHhh
Confidence 997 478999999999999998753
No 311
>PRK13237 tyrosine phenol-lyase; Provisional
Probab=99.81 E-value=2.4e-16 Score=146.33 Aligned_cols=307 Identities=17% Similarity=0.145 Sum_probs=203.1
Q ss_pred CCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHH-HHhCCCeEEE
Q 014936 72 GYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELS-AAFRHIEVRH 150 (415)
Q Consensus 72 ~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~-~~~~g~~~~~ 150 (415)
.|.....+.+|++.+++++ ..+.++.+++|+.|+.+++...+++||.| +..+|...... ....|+....
T Consensus 73 ~Yagd~s~~~LE~~vAe~l--------G~e~aV~v~sGTaAl~ll~~l~v~pGd~V--p~n~~f~Tt~ahI~~~Ga~fvD 142 (460)
T PRK13237 73 AYAGSRNFYHLEETVQEYY--------GFKHVVPTHQGRGAENLLSRIAIKPGQYV--PGNMYFTTTRYHQELNGGIFVD 142 (460)
T ss_pred hhcCCCcHHHHHHHHHHHH--------CCCeEEEeCCHHHHHHHHHHhCCCCcCEE--CCccchHhhHHHHHhCCcEEEe
Confidence 5777678899999999998 45679999999999998877778999965 55545443333 5667775444
Q ss_pred eecc--------CCCCCCCChhHHHhhcCCC----ceEEEecCCCCcc-ccCCCHHHHHHHHHHHhhcCcEEEEccccCC
Q 014936 151 FDLL--------PDKGWEVDLDDIESLADQN----TVALVIINPGNPC-GNVYSYQHLQKLAETANKLKTLVIADEVYGH 217 (415)
Q Consensus 151 ~~~~--------~~~~~~~~~~~l~~~~~~~----~~~v~i~~p~npt-G~~~~~~~l~~i~~~~~~~~~~li~De~~~~ 217 (415)
+..+ ....+.+|+++|+++++++ +.++.+.+++|.. |+..|.++++++.++|++||+.+|+|.++..
T Consensus 143 i~~d~a~~~~~~~p~tgnlD~d~Le~~I~~~~~~~~~lV~a~itvn~~GGqpvs~~~m~~I~elA~~~Gl~Vi~DaAra~ 222 (460)
T PRK13237 143 IIIDEAHDAQSDHPFKGNVDLDKLQALIDEVGAENIAYICLAVTVNLAGGQPVSMANMRAVRELCDKHGIKVFFDATRCV 222 (460)
T ss_pred eecccccccccCCCCCCCcCHHHHHHHhccccCCccCceEEEEecccCCCeeCCHHhHHHHHHHHHHcCCEEEEECcchh
Confidence 4211 1235779999999998753 2356777787877 7999999999999999999999999999976
Q ss_pred cc----------cCCCCcc----cccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhhccc--
Q 014936 218 LV----------FGDKPFV----PMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDI-- 281 (415)
Q Consensus 218 ~~----------~~~~~~~----~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~-- 281 (415)
.. +.+.... .+.++.. +++.|++|.++.+- .|++++++ +++.++++...-.
T Consensus 223 gna~fI~~re~~y~~~~i~ei~~e~~s~aD----~~t~S~~K~~~~~~--GG~i~t~D-------~eL~~~~r~~~~~~e 289 (460)
T PRK13237 223 ENAYFIKEREEGYQDKSIKEIVHEMFSYAD----GCTMSGKKDCLVNI--GGFLAMND-------EELFDEAKELVVVYE 289 (460)
T ss_pred cChhhhcccccccCCCcHhHHhhhccCcCc----EEEEeCCCCCCCCC--ceEEEECC-------HHHHHHHHHhccccC
Confidence 42 1111110 1122222 56678999976652 37777655 4688888766221
Q ss_pred ---c-CCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCc----cccCCC
Q 014936 282 ---L-GDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNL----SLLDDI 353 (415)
Q Consensus 282 ---~-~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~----~~~~~~ 353 (415)
+ ++.+.--..+++..|.+..+. ....+...+.++|.+.|.+. |+. +..|.+|.-++++... -+...
T Consensus 290 G~~tygg~~grd~~alAvgl~E~~~~---~y~~~ri~~~~~l~~~L~~~-Gvp-v~~p~ggH~v~vda~~~lph~~~~~- 363 (460)
T PRK13237 290 GMPSYGGMAGRDMEAMAIGIEESVQY---EYIEHRVGQVRYLGEKLLAA-GVP-IVEPVGGHAVFLDARRFLPHLPQDQ- 363 (460)
T ss_pred CCcCCCChhhhHHHHHHhHHHhhchH---HHHHHHHHHHHHHHHHHHHC-CCc-eecCCCceEEEEEhHHhCCCCCccc-
Confidence 1 222222444555445443221 33344444567777777776 888 4478999888875422 11111
Q ss_pred CCHHHHHHHHHhhcCeEEE-cCCC-CCC-----------CCeEEEEee---CChhhHHHHHHHHHHHHHH
Q 014936 354 IDDIDFCFKLAKEESVIIL-PGTA-VGL-----------KNWLRVTFA---VDPYSLEECLDRIKSFYQR 407 (415)
Q Consensus 354 ~~~~~~~~~ll~~~gi~v~-~g~~-~~~-----------~~~iRi~~~---~~~~~l~~~l~~l~~~~~~ 407 (415)
.....+..+|-.+.||-.. -|+. ++. -.-+|+++. .+.+.++...++|..+.++
T Consensus 364 ~p~~al~~~ly~~~GiR~~e~g~~~~~~~~~~~~~~~~~~el~rlaiprr~yt~~h~~~v~~~~~~~~~~ 433 (460)
T PRK13237 364 FPAQALAAELYIESGVRSMERGIVSAGRDPKTGENHYPKLELVRLTIPRRVYTYAHMDVVADSVIKLYKH 433 (460)
T ss_pred ChHHHHHHHHHHHhCcCeEeecceecccCCCCCccCCCccceeeeccccccccHHHHHHHHHHHHHHHHh
Confidence 1466777888778888542 3333 111 146999993 5889999999999988775
No 312
>PRK05630 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.81 E-value=3.6e-17 Score=154.98 Aligned_cols=340 Identities=15% Similarity=0.098 Sum_probs=207.1
Q ss_pred ccCcceeEecccCCCCCCCCC-CcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChH
Q 014936 32 KNEKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCT 110 (415)
Q Consensus 32 ~~~~~~i~l~~g~~~~~~~~~-~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~ 110 (415)
.+++.++||..|.-... ++ .+|++.++++++++...+..+.. -..+....+|+.+.+..+ ..-+.++++++|+
T Consensus 37 ~dG~~ylD~~~g~~~~~--lGh~~p~i~~ai~~q~~~~~~~~~~~--~~~~~~~~lae~L~~~~p--~~~~~v~f~~SGs 110 (422)
T PRK05630 37 EDGSTVIDAMSSWWSAA--HGHGHPRLKAAAHKQIDTMSHVMFGG--LTHEPAIKLTRKLLNLTD--NGLDHVFYSDSGS 110 (422)
T ss_pred CCCCEEEEcchhHHHhc--CCCCCHHHHHHHHHHHHhCCCcccCC--cCCHHHHHHHHHHHhhCC--CCcCEEEEeCCcH
Confidence 45889999987753221 22 47899999999987633221111 012333444444443222 1246999999999
Q ss_pred HHHHHHHHHhcC-------CC-CEEEEcCCCCcchHHHHHhC-CC-------------eEEEeeccCCCCCCC-C----h
Q 014936 111 QAIDVAMALLSR-------PG-ANILLPRPGFPIYELSAAFR-HI-------------EVRHFDLLPDKGWEV-D----L 163 (415)
Q Consensus 111 ~al~~~~~~l~~-------~g-d~vi~~~p~y~~~~~~~~~~-g~-------------~~~~~~~~~~~~~~~-~----~ 163 (415)
+|++.+++.... ++ .+|+....+|++....+... +. ....+|......... + .
T Consensus 111 eA~e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~ 190 (422)
T PRK05630 111 VSVEVAIKMALQYSKGQGHPERTRLLTWRSGYHGDTFAAMSVCDPEGGMHSLWKGTLPEQIFAPAPPVRGSSPQEISEYL 190 (422)
T ss_pred HHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCccHHHhccCCCcccccccccccCCCCeEcCCCcccCCChHHHHHHH
Confidence 999999987541 23 57999999999865544322 11 112222211100000 1 2
Q ss_pred hHHHhhcCCCceEEEecCC--CCccccC-CCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEE
Q 014936 164 DDIESLADQNTVALVIINP--GNPCGNV-YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTL 240 (415)
Q Consensus 164 ~~l~~~~~~~~~~v~i~~p--~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~ 240 (415)
+.+++.+.. ..+.+|..| +...|.. .+.+.++++.++|++||+++|+||++.++...|.... ...++..+.++
T Consensus 191 ~~~~~~~~~-~iAAvi~EPi~qg~gG~~~~~~~~l~~lr~lc~~~g~llI~DEv~tG~GrtG~~~a-~~~~gv~PDi~-- 266 (422)
T PRK05630 191 RSLELLIDE-TVAAIIIEPIVQGAGGMRFHDVALIEGVRTLCDKHDILLIADEIATGFGRTGELFA-TLAAGVTPDIM-- 266 (422)
T ss_pred HHHHHHHhh-ceEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEecceeCCCcCchhhH-HHhcCCCCCee--
Confidence 344554543 445566666 5666774 6778999999999999999999999987655443221 12222222233
Q ss_pred ccCccccCCCC-ceEEEEEeeCCCCCCChHHHHHHHHhh-------ccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHH
Q 014936 241 GSLSKRWIVPG-WRLGWFVTTDPCGMFRKPKVVERMKKY-------FDILGDPATFIQAAVPSILQQPDEVFFKKTLNLL 312 (415)
Q Consensus 241 ~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~ 312 (415)
+++|.+ ..| ..+|++++++ ++.+.+... ...++..+++...++.+.|+...++ ...+++
T Consensus 267 -t~gK~l-~gG~~p~~av~~~~--------~i~~~~~~~~~~~~~~h~~T~~g~Pla~aaa~aaL~~l~~~---~~~~~~ 333 (422)
T PRK05630 267 -CVGKAL-TGGFMSFAATLCTD--------KVAQLISTPNGGGALMHGPTFMANPLACAVAHASLEIIETG---MWRKQV 333 (422)
T ss_pred -eeechh-hcCccccceeeccH--------HHHHHHhccCCCCccccCCCCcCCHHHHHHHHHHHHHHHhC---cHHHHH
Confidence 679984 346 5789999865 576666421 1235678888888888887653222 233455
Q ss_pred HHHHHHHHHHhhc---CCCCcCCCCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEee-
Q 014936 313 KQSVDICYNKIKE---IPCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFA- 388 (415)
Q Consensus 313 ~~~~~~l~~~l~~---~~~~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~- 388 (415)
+++.+++.+.|+. .|.+. . ...-|+++-+.+... .+...+... +.++|+.+.+. .+.+|+...
T Consensus 334 ~~~g~~l~~~L~~l~~~~~v~-~-vRg~Gl~~~ie~~~~-----~~~~~~~~~-~~~~Gl~~~~~-----g~~l~~~PpL 400 (422)
T PRK05630 334 KRIEAELIAGLSPLAHLPGVA-D-VRVLGAIGVVEMEQP-----VDMEEATQA-AVDHGVWLRPF-----GRLVYVMPPY 400 (422)
T ss_pred HHHHHHHHHHHHHhhcCCCee-e-eeccccEEEEEECCc-----ccHHHHHHH-HHHCCeEEEec-----CCEEEEECCc
Confidence 5555555555554 33332 1 234477777777431 123445444 46679999763 257899884
Q ss_pred -CChhhHHHHHHHHHHHHHH
Q 014936 389 -VDPYSLEECLDRIKSFYQR 407 (415)
Q Consensus 389 -~~~~~l~~~l~~l~~~~~~ 407 (415)
.+++++++++++|.+++++
T Consensus 401 ~it~~~i~~~~~~l~~al~~ 420 (422)
T PRK05630 401 ITTSEQIAQICAALAAAVKA 420 (422)
T ss_pred cCCHHHHHHHHHHHHHHHhc
Confidence 7899999999999998864
No 313
>PRK08742 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.81 E-value=7.8e-17 Score=154.25 Aligned_cols=353 Identities=14% Similarity=0.052 Sum_probs=212.1
Q ss_pred ccCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCC---CCCCcEEEeCC
Q 014936 32 KNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYK---LTPNDVFVTSG 108 (415)
Q Consensus 32 ~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~---~~~~~i~i~~g 108 (415)
.+++.++|+..|.-.... --.+|.+.+++++++..-... .. ..-..+.+..+++.+.+..+.. -..+.++++++
T Consensus 61 ~dG~~ylD~~~g~~~~~l-Gh~~p~i~~Ai~~q~~~l~~~-~~-~~~~~~~~~~lae~L~~~~p~~~~~~~~~~v~f~~s 137 (472)
T PRK08742 61 HDGRRYLDAVSSWWTNLF-GHAEPRIGAAIAAQAGELEQV-ML-AGFTHEPAVQLAEQLLAIAPRQDGRAPLSKVFYADN 137 (472)
T ss_pred CCCCEEEEcCccHHhccC-CCCCHHHHHHHHHHHHhCCCc-cc-cccCCHHHHHHHHHHHHhCCCcccCCCCCEEEEeCC
Confidence 347889999777422111 124789999999987642111 00 0011234555666655433211 12369999999
Q ss_pred hHHHHHHHHHHhcC-------CC-CEEEEcCCCCcchHHHHHhCCCe-------------EEEeeccCCC--CCCC----
Q 014936 109 CTQAIDVAMALLSR-------PG-ANILLPRPGFPIYELSAAFRHIE-------------VRHFDLLPDK--GWEV---- 161 (415)
Q Consensus 109 ~~~al~~~~~~l~~-------~g-d~vi~~~p~y~~~~~~~~~~g~~-------------~~~~~~~~~~--~~~~---- 161 (415)
|++|++.+++.... +| .+|+....+|++....+...+.. +..++..... .++.
T Consensus 138 GSEAvE~AlKlAr~~~~~~g~~~r~~ii~~~~syHG~t~gals~~~~~~~~~~~~p~~~~~~~~~~p~~~~~~~~~~~~~ 217 (472)
T PRK08742 138 GSAGVEVALKMAFHYFHNRGEHRRTRFIALENGYHGETIGALAVGDIPLYRRVYAPLLLESLFAPSPDAYLAEPGQSAED 217 (472)
T ss_pred chHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCCchhhhhccCCcccccccCCCCCCCEEeCCCCccccccCCCHHH
Confidence 99999999988631 22 57999999999876554433211 1112211000 0011
Q ss_pred ----ChhHHHhhcC--CCceEEEecCC--CCcccc-CCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccC
Q 014936 162 ----DLDDIESLAD--QNTVALVIINP--GNPCGN-VYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFG 232 (415)
Q Consensus 162 ----~~~~l~~~~~--~~~~~v~i~~p--~nptG~-~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~ 232 (415)
+++.+++.+. ....+.+|..| ++..|. ..|.+.++++.++|+++|+++|.||++.++...|.... ...++
T Consensus 218 ~~~~~~~~l~~~~~~~~~~iAAvI~EPviqg~gG~~~~p~~fl~~lr~lc~~~gillI~DEV~TGfGRtG~~~a-~e~~g 296 (472)
T PRK08742 218 YALQAADALQALFEQSPGEICALILEPRLQCAGGMRMHHPAYLRRARELCDAHGAFLIADEIATGFGRTGTLFA-CEQAG 296 (472)
T ss_pred HHHHHHHHHHHHHHhCCCceEEEEEccccccCCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCccchH-HHhcC
Confidence 2455666663 23456677777 556676 46889999999999999999999999998876664322 22233
Q ss_pred CCCCeEEEccCccccCCCC-ceEEEEEeeCCCCCCChHHHHHHHHhh-------ccccCCchhHHHHHHHHhhCCCcHHH
Q 014936 233 STVPILTLGSLSKRWIVPG-WRLGWFVTTDPCGMFRKPKVVERMKKY-------FDILGDPATFIQAAVPSILQQPDEVF 304 (415)
Q Consensus 233 ~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~a~~~~l~~~~~~~ 304 (415)
..+.++ +++|.+ ..| +++|.+++++ ++.+.+... ...+++.++++.+++.+.|+...++.
T Consensus 297 v~PDiv---~~gKgl-~gG~~Plaav~~~~--------ei~~~~~~~~~~~~~~h~~T~~gnpl~~Aaa~a~L~~i~~~~ 364 (472)
T PRK08742 297 VMPDLL---CLSKGL-TGGFLPLSAVLATQ--------QLYDAFLDDSRERAFLHSHSYTGNPLACAAALATLDIFADDD 364 (472)
T ss_pred CCCCEE---EEcccc-cCCCCCcceeeccH--------HHHHHhhccCccCccCcCCCCCccHHHHHHHHHHHHHHHHCC
Confidence 333344 468994 556 4899999865 676665421 12356678999999888887543333
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCccccC--CCCC----HHHHHHHHHhhcCeEEEcCCCCC
Q 014936 305 FKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLD--DIID----DIDFCFKLAKEESVIILPGTAVG 378 (415)
Q Consensus 305 ~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~~--~~~~----~~~~~~~ll~~~gi~v~~g~~~~ 378 (415)
+.++.+++.+....+.+.+++.|.+. . ...-|+++-+.+...... .... ...+... +.++||.+.+..
T Consensus 365 l~~~~~~~g~~l~~~~~~~~~~~~i~-d-vRG~Gl~~giel~~~~~~~~~~~~~~~~~~~~~~~-~~~~Gll~~~~g--- 438 (472)
T PRK08742 365 VIARNQPTAARMTQLAAQIGEHPHVA-D-VRQAGMVVAFELTRGGNKRTPFPPAARVGLHAYRA-ALARGVVLRPLG--- 438 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCee-e-EeccceEEEEEeccCccccccCCchhHHHHHHHHH-HHHCCeEEEecC---
Confidence 32333333332223333444554433 1 345577777766421100 0000 1233444 456799997632
Q ss_pred CCCeEEEEee--CChhhHHHHHHHHHHHHHHH
Q 014936 379 LKNWLRVTFA--VDPYSLEECLDRIKSFYQRH 408 (415)
Q Consensus 379 ~~~~iRi~~~--~~~~~l~~~l~~l~~~~~~~ 408 (415)
+.|||... .+++++++++++|.+++++.
T Consensus 439 --~vi~~~PpL~it~~ei~~~~~~l~~~l~~~ 468 (472)
T PRK08742 439 --DVLYWMPPYCVDEAQLALLADTTRHAIDEA 468 (472)
T ss_pred --CEEEEECCCCCCHHHHHHHHHHHHHHHHHH
Confidence 67999884 68999999999999999864
No 314
>PRK12389 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.81 E-value=8.5e-17 Score=153.29 Aligned_cols=343 Identities=15% Similarity=0.065 Sum_probs=205.9
Q ss_pred ccCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHH
Q 014936 32 KNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQ 111 (415)
Q Consensus 32 ~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~ 111 (415)
.+|+.++|+..|.-.... --.+|.+.+++.+++.......++. +.+..+++.+.+..+ ..+.++++++|++
T Consensus 50 ~dG~~ylD~~~g~~~~~l-Gh~~p~v~~ai~~q~~~~~~~~~~~-----~~~~~la~~l~~~~p---~~~~v~f~~sGse 120 (428)
T PRK12389 50 VDGNKYIDYLAAYGPIIT-GHAHPHITKAITEAAENGVLYGTPT-----ELEIEFAKMLKEAIP---SLEKVRFVNSGTE 120 (428)
T ss_pred CCCCEEEEcccccccccc-CCCCHHHHHHHHHHHHhCCccCCCC-----HHHHHHHHHHHHhCC---CCcEEEEeCCHHH
Confidence 358889999877532211 1247999999999988644322222 334445555543222 2469999999999
Q ss_pred HHHHHHHHhcC-C-CCEEEEcCCCCcchHHHHHhC-CCeEE--------EeeccC-CCC---CCCChhHHHhhcCC--Cc
Q 014936 112 AIDVAMALLSR-P-GANILLPRPGFPIYELSAAFR-HIEVR--------HFDLLP-DKG---WEVDLDDIESLADQ--NT 174 (415)
Q Consensus 112 al~~~~~~l~~-~-gd~vi~~~p~y~~~~~~~~~~-g~~~~--------~~~~~~-~~~---~~~~~~~l~~~~~~--~~ 174 (415)
|++.+++.... . -.+|+...-+|++....+... |.... .++... .+. .-.|++.+++.++. ..
T Consensus 121 A~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~ 200 (428)
T PRK12389 121 AVMTTIRVARAYTGRTKIIKFAGCYHGHSDLVLVAAGSGPSTLGTPDSAGVPKSIAQEVITVPFNDIEALKEALDKWGDE 200 (428)
T ss_pred HHHHHHHHHHHhhCCCEEEEECCCcCCChHHHHHhcCCcccccCCCCCCCCCCcccCceEEcCCCCHHHHHHHHHhcCCc
Confidence 99999987641 2 257888899999876554332 21110 000000 000 01267888877753 23
Q ss_pred eEEEecCC-CCccccC-CCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCc
Q 014936 175 VALVIINP-GNPCGNV-YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGW 252 (415)
Q Consensus 175 ~~v~i~~p-~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~ 252 (415)
.+.++..| .+..|.+ .+.+.+++|.++|+++|+++|.||++.++ ..+... ....++..+++ .+++|.+ ..|+
T Consensus 201 vaavi~EPv~g~~G~~~p~~~yl~~l~~lc~~~g~llI~DEV~tG~-Rt~~~~-a~~~~gv~PDi---vt~gK~l-ggG~ 274 (428)
T PRK12389 201 VAAVLVEPIVGNFGIVEPKPGFLEAVNELAHEAGALVIYDEVITAF-RFMYGG-AQDLLGVEPDL---TALGKII-GGGL 274 (428)
T ss_pred EEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEcccccc-ccCcch-hhHHhCCCCCe---eeechhh-cCCC
Confidence 45666777 5556765 56888999999999999999999999987 332211 11112222223 3789995 5679
Q ss_pred eEEEEEeeCCCCCCChHHHHHHHHh---h-ccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhc---
Q 014936 253 RLGWFVTTDPCGMFRKPKVVERMKK---Y-FDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKE--- 325 (415)
Q Consensus 253 r~G~~~~~~~~~~~~~~~~~~~~~~---~-~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~--- 325 (415)
++|.+++++ ++.+.+.. . ...++..+|++.+++.+.|+...++ +..++++++-+++.+.|++
T Consensus 275 Pi~av~~~~--------~i~~~~~~~~~~~~~~T~~gnpl~~Aaala~L~~l~~~---~l~~~~~~~g~~l~~~L~~l~~ 343 (428)
T PRK12389 275 PIGAYGGRK--------DIMEQVAPLGPAYQAGTMAGNPASMAAGIACLEVLQQE---GVYEKLDRLGAMLEEGILEAAE 343 (428)
T ss_pred ceeEEeEHH--------HHHhhhccCCCcccccCCccCHHHHHHHHHHHHHHhcc---cHHHHHHHHHHHHHHHHHHHHH
Confidence 999998865 67776642 1 2235577899988888888653221 2444555555555555543
Q ss_pred -CCCCcCCCCCCCceEEEEecCccccCCC-----CC---HHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEeeCChhhHHH
Q 014936 326 -IPCISCPHKPEGSMAVMLKLNLSLLDDI-----ID---DIDFCFKLAKEESVIILPGTAVGLKNWLRVTFAVDPYSLEE 396 (415)
Q Consensus 326 -~~~~~~~~~p~~g~~~~~~l~~~~~~~~-----~~---~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~~~l~~ 396 (415)
.|.+. ......|++ -+.+........ .+ ...+... +.++||.+.+.. .+.+.+++.++++++++
T Consensus 344 ~~~~~~-~v~r~~g~~-gi~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~Gv~~~~~~----~~~~~~~l~~t~e~id~ 416 (428)
T PRK12389 344 KHGITI-TINRLKGAL-TVYFTDEKVTNYDQAERSDGEAFGKFFKL-MLNQGINLAPSK----YEAWFLTTAHTEEDIEE 416 (428)
T ss_pred hCCCCE-EEEecCcEE-EEEEeCCCCCChhhhcccCHHHHHHHHHH-HHHCCcEeecCC----CCCeeecCCCCHHHHHH
Confidence 43211 111233433 233322110000 01 2234444 456799998753 13356677789999999
Q ss_pred HHHHHHHHHHH
Q 014936 397 CLDRIKSFYQR 407 (415)
Q Consensus 397 ~l~~l~~~~~~ 407 (415)
+++++.+++++
T Consensus 417 ~~~~l~~~l~~ 427 (428)
T PRK12389 417 TLEAVDRAFAQ 427 (428)
T ss_pred HHHHHHHHHHh
Confidence 99999998864
No 315
>PRK00615 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.80 E-value=3.2e-17 Score=155.37 Aligned_cols=346 Identities=14% Similarity=0.019 Sum_probs=204.2
Q ss_pred ccCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHH
Q 014936 32 KNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQ 111 (415)
Q Consensus 32 ~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~ 111 (415)
.+|+.++|+..|.-.... --.+|.+.+++++++.......+.. +.+..+++.+.+..+ ...+.++++++|++
T Consensus 50 ~dG~~yiD~~~g~~~~~l-Gh~~p~v~~ai~~q~~~~~~~~~~~-----~~~~~la~~L~~~~~--~~~~~v~f~~SGsE 121 (433)
T PRK00615 50 SLGKTFIDFCGSWGSLIH-GHSHPKICDAIQQGAERGTSYGLTS-----EQEILFAEELFSYLG--LEDHKIRFVSSGTE 121 (433)
T ss_pred CCCCEEEEcccchhcccc-CCCCHHHHHHHHHHHHhCCCCCCCC-----HHHHHHHHHHHHhCC--CCcCEEEEeCchHH
Confidence 358889999877532211 1247999999999987643222222 233444444443222 12368999999999
Q ss_pred HHHHHHHHhcC-CC-CEEEEcCCCCcchHHH---HHhCCCeE-----EEeeccCCCC-----CCCChhHHHhhcCC--Cc
Q 014936 112 AIDVAMALLSR-PG-ANILLPRPGFPIYELS---AAFRHIEV-----RHFDLLPDKG-----WEVDLDDIESLADQ--NT 174 (415)
Q Consensus 112 al~~~~~~l~~-~g-d~vi~~~p~y~~~~~~---~~~~g~~~-----~~~~~~~~~~-----~~~~~~~l~~~~~~--~~ 174 (415)
|++.+++.... .| .+|+....+|++.... +...+... ......+... .-.|++.+++.+.. ..
T Consensus 122 A~e~AiklAr~~tgr~~ii~~~~~yHG~td~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~ 201 (433)
T PRK00615 122 ATMTAVRLARGITGRSIIIKFLGCYHGHADTLLQGISFSETSLDTLTHLVDTDLAHPLTLSLPYNDFQIFQTVMNSLGHR 201 (433)
T ss_pred HHHHHHHHHHHhhCCCEEEEEcCccCCCCcccCcccccCCCCcCcCCCCCCCCCCCCCeEeCCCCCHHHHHHHHHhcCCc
Confidence 99999987641 23 5788889899886522 11111000 0000000000 00267888877742 23
Q ss_pred eEEEecCC-CCccccC-CCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCc
Q 014936 175 VALVIINP-GNPCGNV-YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGW 252 (415)
Q Consensus 175 ~~v~i~~p-~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~ 252 (415)
.+.+++.| ....|.. .+.+.+++|.++|++||+++|+||++.++ ..|.. .....++..+.++ +++|.++ .|+
T Consensus 202 ~aavI~Epv~~~~G~~~p~~~yl~~l~~lc~~~g~llI~DEv~tG~-R~G~~-ga~~~~gv~PDi~---~~gK~lg-gG~ 275 (433)
T PRK00615 202 VAGVIFEPICANMGVVLPKPGFIEGIIQTCRRTGSLSIMDEVVTGF-RVAQG-GAAAIYHVKPDIT---VYGKILG-GGL 275 (433)
T ss_pred eEEEEECCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEEcccccc-cccHh-HHHHhcCCCCCeE---EEccccc-CCc
Confidence 45667777 4455765 46788999999999999999999999766 33321 1112222222233 5799964 568
Q ss_pred eEEEEEeeCCCCCCChHHHHHHHHhh----ccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhh----
Q 014936 253 RLGWFVTTDPCGMFRKPKVVERMKKY----FDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIK---- 324 (415)
Q Consensus 253 r~G~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~---- 324 (415)
.+|++++++ ++++.+... ...++..+++..+++.+.|+...+ ++..++++++.+++.+.|+
T Consensus 276 p~~av~~~~--------~i~~~~~~~~~~~~~~T~~g~p~~~aa~la~L~~i~~---~~~~~~~~~~g~~l~~~l~~~~~ 344 (433)
T PRK00615 276 PAAAVVAHK--------SIMDHLAPEGTIFQAGTLSGNPLAMAAGKASINLCRE---QGFYTQLSTLEQNFLSPIEEMIR 344 (433)
T ss_pred ceeeeeecH--------HHHhhhcCCCCcccCCCCcccHHHHHHHHHHHHHHhc---ccHHHHHHHHHHHHHHHHHHHHH
Confidence 899999865 677776432 122445688888888888865322 1234444444455544443
Q ss_pred cCCCCcCCCCCCCceEEEEecCccccCCC--------CCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEeeCChhhHHH
Q 014936 325 EIPCISCPHKPEGSMAVMLKLNLSLLDDI--------IDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFAVDPYSLEE 396 (415)
Q Consensus 325 ~~~~~~~~~~p~~g~~~~~~l~~~~~~~~--------~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~~~l~~ 396 (415)
+. ++.+.... -|.++.+.+......+. .....+..++ .++||.+.|..... .=++..+++++|++
T Consensus 345 ~~-g~~v~~~r-~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~Gv~~~~~~~~~----~~ls~~ht~~did~ 417 (433)
T PRK00615 345 SQ-GFPVSLVR-YGSMFSFFFNENRPNNLAEAQLSDIEAFQTFYQSA-FSKGVYLSPSPFEA----SFLSSAHSMENLDY 417 (433)
T ss_pred Hc-CCCeEEEe-eceEEEEEEeCCCCCChHHHhhCCHHHHHHHHHHH-HHCCeeecCccccc----cceecCCCHHHHHH
Confidence 32 22211122 46666666643211000 0122455555 55799998764311 13566789999999
Q ss_pred HHHHHHHHHHHHH
Q 014936 397 CLDRIKSFYQRHA 409 (415)
Q Consensus 397 ~l~~l~~~~~~~~ 409 (415)
+++.+.+++++..
T Consensus 418 ~~~a~~~~~~~~~ 430 (433)
T PRK00615 418 AQNVLIDSLEKVF 430 (433)
T ss_pred HHHHHHHHHHHHh
Confidence 9999999998753
No 316
>COG2873 MET17 O-acetylhomoserine sulfhydrylase [Amino acid transport and metabolism]
Probab=99.80 E-value=8.1e-17 Score=141.12 Aligned_cols=293 Identities=16% Similarity=0.161 Sum_probs=196.4
Q ss_pred CCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHH----HHHhCCCeEEEee
Q 014936 77 AGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYEL----SAAFRHIEVRHFD 152 (415)
Q Consensus 77 ~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~----~~~~~g~~~~~~~ 152 (415)
+....|++.||..= ..-.-+.+++|++|+..++..+.++||+|+..+--|.+... .++.+|+++..++
T Consensus 62 PT~~vlE~RiAaLE--------GG~aa~a~aSG~AA~~~ai~~la~aGD~iVss~~LYGGT~~lf~~tl~~~Gi~v~fvd 133 (426)
T COG2873 62 PTTDVLEERIAALE--------GGVAALAVASGQAAITYAILNLAGAGDNIVSSSKLYGGTYNLFSHTLKRLGIEVRFVD 133 (426)
T ss_pred chHHHHHHHHHHhh--------cchhhhhhccchHHHHHHHHHhccCCCeeEeeccccCchHHHHHHHHHhcCcEEEEeC
Confidence 45678999999874 22345677888999999999999999999999988886544 4578899999885
Q ss_pred ccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccC
Q 014936 153 LLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFG 232 (415)
Q Consensus 153 ~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~ 232 (415)
. .|++.++++++++||+|++..-.||.+.+ -++++|+++|+++++++|+|...+.-. ...|+ ..+
T Consensus 134 ~-------~d~~~~~~aI~~nTkavf~EtigNP~~~v---~Die~ia~iAh~~gvpliVDNT~atpy----l~rP~-~hG 198 (426)
T COG2873 134 P-------DDPENFEAAIDENTKAVFAETIGNPGLDV---LDIEAIAEIAHRHGVPLIVDNTFATPY----LCRPI-EHG 198 (426)
T ss_pred C-------CCHHHHHHHhCcccceEEEEeccCCCccc---cCHHHHHHHHHHcCCcEEEecCCCcce----ecchh-hcC
Confidence 3 37999999999999999999999999999 568889999999999999999987521 11222 223
Q ss_pred CCCCeEEEccCccccCCCCceEEEEEeeCCCCCCC-------------------------hHHHHHHHHh--hccccCCc
Q 014936 233 STVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFR-------------------------KPKVVERMKK--YFDILGDP 285 (415)
Q Consensus 233 ~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~-------------------------~~~~~~~~~~--~~~~~~~~ 285 (415)
.+ |++.|++|..+..|.-+|.+++..-.+-+. .+.++-+.+. .+....+.
T Consensus 199 AD---IVvHS~TK~igGhGt~iGG~iVD~G~FDw~~~~rfP~~~~p~p~YhGl~~~~~~g~~af~~~~r~~~lRDlGa~l 275 (426)
T COG2873 199 AD---IVVHSATKYIGGHGTAIGGVIVDGGKFDWTANGRFPEFTTPDPSYHGLVYTETFGNAAFIIKARVQLLRDLGATL 275 (426)
T ss_pred CC---EEEEeecccccCCccccceEEEeCCccccccCCCCcccCCCCccccceehhhhcccHHHHHHHHHHHHHhccccc
Confidence 33 889999999999999999998854332221 0001111111 12223344
Q ss_pred hhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCC-----------------CceEEEEecCcc
Q 014936 286 ATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPE-----------------GSMAVMLKLNLS 348 (415)
Q Consensus 286 ~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~-----------------~g~~~~~~l~~~ 348 (415)
+|.....+..-|+. +.-+.++..++...+.+.|+..|.+..+.+|. .|-.+.+.+...
T Consensus 276 sPfnAfl~lqGlET-----L~LRmerH~~NA~~vA~~L~~HpkV~~V~YpgL~~~~~h~la~kyl~~g~g~vltF~~kgg 350 (426)
T COG2873 276 SPFNAFLLLQGLET-----LSLRMERHCENALKVAEFLENHPKVAWVNYPGLASHPYHALAKKYLPKGAGAVLTFGVKGG 350 (426)
T ss_pred CcHHHHHHHhchhh-----hHHHHHHHHHhHHHHHHHHhcCCCeeeeecCCCCCCcchhHHHhhccCCCceEEEEEecCh
Confidence 44444444444433 56677888889999999999888776554442 233444555421
Q ss_pred ccCCCCCHHHHHHHHH-----h----hcCeEEEcCCCCCC-------------CCeEEEEeeCChhhHHHHHHHHHHHHH
Q 014936 349 LLDDIIDDIDFCFKLA-----K----EESVIILPGTAVGL-------------KNWLRVTFAVDPYSLEECLDRIKSFYQ 406 (415)
Q Consensus 349 ~~~~~~~~~~~~~~ll-----~----~~gi~v~~g~~~~~-------------~~~iRi~~~~~~~~l~~~l~~l~~~~~ 406 (415)
.+...+++..+- . .+-+.+.|.+.... ++.||+|++. |+++.++..|+++++
T Consensus 351 ----~ea~~~fi~~l~L~s~laNvGD~rsLvIHPAsTTH~ql~~ee~~~aGv~~~~IRlSVGI--Ed~~DiiaDl~qAl~ 424 (426)
T COG2873 351 ----YEAGKKFIDALKLFSHLANIGDARSLVIHPASTTHRQLSEEEQAAAGVTPDLIRLSVGI--EDIDDIIADLEQALE 424 (426)
T ss_pred ----HHHHHHHHHHHHHHHhhccccccceeEecCcccchhcCCHHHHHhcCCCCCcEEEEecc--CCHHHHHHHHHHHHh
Confidence 112234433330 1 12345556544221 6789999986 355666666666654
No 317
>PLN02271 serine hydroxymethyltransferase
Probab=99.80 E-value=1.9e-16 Score=149.26 Aligned_cols=346 Identities=14% Similarity=0.052 Sum_probs=221.3
Q ss_pred cceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCC------CCCCcHHHHHHHHHHHhhhCCCCCCC--CcEEEe
Q 014936 35 KKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYA------PTAGLPLTRRAIAEYLSRDLPYKLTP--NDVFVT 106 (415)
Q Consensus 35 ~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~------~~~g~~~lr~~ia~~~~~~~~~~~~~--~~i~i~ 106 (415)
..-++|-... ...++.+.+++-..+.+....+|+ -...+.+++....+...+.++..... .+|...
T Consensus 148 ~~~l~LIASE------N~~S~av~~algS~ltnkYaEG~pG~Ryy~G~~~iD~iE~la~era~~lF~~~~~~~gaNVQp~ 221 (586)
T PLN02271 148 FKGIELIASE------NFVCRAVMEALGSHLTNKYSEGMPGARYYTGNQYIDQIERLCCERALAAFGLDSEKWGVNVQPY 221 (586)
T ss_pred hcCeeecccc------ccCCHHHHHHhcCcccccCCCCCCCCcCCCCChhHHHHHHHHHHHHHHHhCCcccccccceeec
Confidence 3456665544 345788888887776643322332 22334456555555555545432211 344444
Q ss_pred CChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHH---------HhCCCeEEE--eeccCCCCCCCChhHHHh-hcCCCc
Q 014936 107 SGCTQAIDVAMALLSRPGANILLPRPGFPIYELSA---------AFRHIEVRH--FDLLPDKGWEVDLDDIES-LADQNT 174 (415)
Q Consensus 107 ~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~---------~~~g~~~~~--~~~~~~~~~~~~~~~l~~-~~~~~~ 174 (415)
+|+.|+.+++.++++|||+|+..+..|.++.... ...|..+.. ++++++ ...+|.+++++ +...++
T Consensus 222 -SGs~AN~aV~~ALl~PGD~IL~ldl~~GGHlshg~~~~~g~~vs~sG~~~~~vpY~~d~~-~g~IDyd~lek~a~~~rP 299 (586)
T PLN02271 222 -SCTSANFAVYTGLLLPGDRIMGLDSPSGGHMSHGYYTPGGKKVSGASIFFESLPYKVNPQ-TGYIDYDKLEEKALDFRP 299 (586)
T ss_pred -cHHHHHHHHHHHhcCCCCEEEEecCCCCCchhcccccccccccccccceEEEEEcccccc-cCccCHHHHHHHhhhcCC
Confidence 7788889999999999999999888777654322 334544443 445433 34699999998 667789
Q ss_pred eEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCc-ccccccCCCCCeEEEccCccccCCCCce
Q 014936 175 VALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPF-VPMGVFGSTVPILTLGSLSKRWIVPGWR 253 (415)
Q Consensus 175 ~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~-~~~~~~~~~~~~i~~~s~sK~~~~~G~r 253 (415)
++|++....+| ..+ +++++.++|+++|+++++|.+|..+...+... .++.. . -++.+|.+|+ +.|.|
T Consensus 300 KLII~g~Sayp--r~~---D~~~i~eIAdevGA~LmvD~AH~aGLIa~g~~~sP~~~--a---Dvvt~TTHKt--LrGPr 367 (586)
T PLN02271 300 KILICGGSSYP--REW---DYARFRQIADKCGAVLMCDMAHISGLVAAKECVNPFDY--C---DIVTSTTHKS--LRGPR 367 (586)
T ss_pred eEEEECchhcc--CcC---CHHHHHHHHHHcCCEEEEECcccccccccCcCCCCCcC--C---cEEEeCCccc--CCCCC
Confidence 98888776777 343 36677777889999999999998866554322 22221 2 2788899999 55666
Q ss_pred EEEEEeeCCCC------------CCChHHHHHHHHhhccc--cCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHH
Q 014936 254 LGWFVTTDPCG------------MFRKPKVVERMKKYFDI--LGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDIC 319 (415)
Q Consensus 254 ~G~~~~~~~~~------------~~~~~~~~~~~~~~~~~--~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l 319 (415)
.|.+.+++... ....+++.+++...... .+++.....++++.+++......++...+++.++.+.|
T Consensus 368 GG~I~~r~~~~~~~~g~~gs~s~~~~~~d~~~kI~~aVfPglqgGphn~~IAalAvalkea~~~efk~Ya~QVv~NAkaL 447 (586)
T PLN02271 368 GGIIFYRKGPKLRKQGMLLSHGDDNSHYDFEEKINFAVFPSLQGGPHNNHIAALAIALKQVATPEYKAYMQQVKKNAQAL 447 (586)
T ss_pred ceEEEecccccccccCCccccccccccHHHHHHhhcccCCccccChhHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHH
Confidence 78888854210 00123455666554321 23333333555555565433344588999999999999
Q ss_pred HHHhhcCCCCcCCCCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCC-----CCCeEEEEe------e
Q 014936 320 YNKIKEIPCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVG-----LKNWLRVTF------A 388 (415)
Q Consensus 320 ~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~-----~~~~iRi~~------~ 388 (415)
.+.|.+. |+.++........+++++.... .....++..|++.||.+.--..++ .++.|||+. +
T Consensus 448 A~~L~~~-G~~vv~ggTdnHlvLvDl~~~g-----~~G~~ae~~Le~~~I~~Nkn~iP~d~~~~~psGiRiGT~alT~rG 521 (586)
T PLN02271 448 ASALLRR-KCRLVTGGTDNHLLLWDLTTLG-----LTGKNYEKVCEMCHITLNKTAIFGDNGTISPGGVRIGTPAMTSRG 521 (586)
T ss_pred HHHHHHC-CCeEeeCCCCcceeeecCcccC-----CCHHHHHHHHHHcCeEeccccCCCCCCCCCCCcccccCHHHHhcC
Confidence 9999987 8885544455677888875421 134556777889999985443332 257899998 2
Q ss_pred CChhhHHHHHHHHHHHHH
Q 014936 389 VDPYSLEECLDRIKSFYQ 406 (415)
Q Consensus 389 ~~~~~l~~~l~~l~~~~~ 406 (415)
..++++++..+.|.++++
T Consensus 522 ~~e~d~~~iA~~i~~~~~ 539 (586)
T PLN02271 522 CLESDFETIADFLLRAAQ 539 (586)
T ss_pred CCcHHHHHHHHHHHHHHh
Confidence 456888888888887766
No 318
>PLN02482 glutamate-1-semialdehyde 2,1-aminomutase
Probab=99.80 E-value=1.1e-16 Score=152.94 Aligned_cols=343 Identities=16% Similarity=0.096 Sum_probs=204.2
Q ss_pred ccCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHH
Q 014936 32 KNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQ 111 (415)
Q Consensus 32 ~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~ 111 (415)
.+++.++|+..|.-.... --.+|.+.+++++++..... +..+ .+.+..+|+.+.+..+ ..+.+.++++|++
T Consensus 96 ~dG~~yiD~~~g~g~~~l-Gh~~p~v~~av~~ql~~~~~--~~~~---~~~~~~lAe~l~~~~p---~~~~v~f~~SGsE 166 (474)
T PLN02482 96 VDGNEYIDYVGSWGPAII-GHADDEVLAALAETMKKGTS--FGAP---CLLENVLAEMVIDAVP---SVEMVRFVNSGTE 166 (474)
T ss_pred CCCCEEEEeccccccccc-CCCCHHHHHHHHHHHhhCCC--CCCC---CHHHHHHHHHHHHhCC---CCCEEEEeCChHH
Confidence 348889999777522111 12478999999999986543 2221 2455566666654333 2479999999999
Q ss_pred HHHHHHHHhcC-CC-CEEEEcCCCCcchHHHHHh-C--CCeE------EEeeccCC-----CCCCCChhHHHhhcCC--C
Q 014936 112 AIDVAMALLSR-PG-ANILLPRPGFPIYELSAAF-R--HIEV------RHFDLLPD-----KGWEVDLDDIESLADQ--N 173 (415)
Q Consensus 112 al~~~~~~l~~-~g-d~vi~~~p~y~~~~~~~~~-~--g~~~------~~~~~~~~-----~~~~~~~~~l~~~~~~--~ 173 (415)
|++.+++.... .| .+|+....+|+++...+.. . +... ..++.... ..+ -|++.+++.++. .
T Consensus 167 A~e~AlklAR~~tgr~~Ii~~~g~YHG~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-nd~~~l~~~l~~~~~ 245 (474)
T PLN02482 167 ACMGVLRLARAYTGREKIIKFEGCYHGHADSFLVKAGSGVATLGLPDSPGVPKAATSATLTAPY-NDLEAVKKLFEANKG 245 (474)
T ss_pred HHHHHHHHHHHhcCCCEEEEECCccCCCcchhhhhcCCCccccCCCCCCCCCCCCCCCeEEecC-CChHHHHHHHHhCCC
Confidence 99999988641 22 5789999999986543211 0 0000 00000000 011 267888887753 3
Q ss_pred ceEEEecCC-CCccccCC-CHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCC
Q 014936 174 TVALVIINP-GNPCGNVY-SYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPG 251 (415)
Q Consensus 174 ~~~v~i~~p-~nptG~~~-~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G 251 (415)
..+.++..| ....|.+. +.+.+++|.++|++||+++|+||++.++ ..+.. .....++....+ .+++|.++ .|
T Consensus 246 ~iAavI~Epv~g~~G~i~p~~~fl~~lr~lc~~~g~lLI~DEV~tGf-R~g~~-ga~~~~gv~PDi---~t~gK~lg-gG 319 (474)
T PLN02482 246 EIAAVILEPVVGNSGFIVPKKEFLEGLREITKENGALLVFDEVMTGF-RIAYG-GAQEYFGITPDL---TTLGKVIG-GG 319 (474)
T ss_pred ceEEEEECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCe-ecCcc-hHhHHhCCCCCE---EEecchhh-CC
Confidence 455677777 45567664 5788999999999999999999999876 44332 112223322223 37799964 78
Q ss_pred ceEEEEEeeCCCCCCChHHHHHHHHhh----ccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCC
Q 014936 252 WRLGWFVTTDPCGMFRKPKVVERMKKY----FDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIP 327 (415)
Q Consensus 252 ~r~G~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~ 327 (415)
+++|.+++++ ++++.+... ...++..++++..++.+.|+...+ ++..++++++-+++.+.|+++.
T Consensus 320 ~Pigav~g~~--------ei~~~~~~~~~~~~~~T~~gnpl~~aAala~L~~l~~---~~~~~~~~~~g~~l~~~L~~l~ 388 (474)
T PLN02482 320 LPVGAYGGRR--------EIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLQQ---PGTYEYLDKITKKLIQGILEAG 388 (474)
T ss_pred CceEEEEEcH--------HHHHhhccCCCcccccCcchhHHHHHHHHHHHHHHhc---cCHHHHHHHHHHHHHHHHHHHH
Confidence 9999998865 677776421 122445788888888887765321 2344555555555555555430
Q ss_pred ---CCcCCCCCCCceEEEEecCcccc---CC--CCC---HHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEeeCChhhHHH
Q 014936 328 ---CISCPHKPEGSMAVMLKLNLSLL---DD--IID---DIDFCFKLAKEESVIILPGTAVGLKNWLRVTFAVDPYSLEE 396 (415)
Q Consensus 328 ---~~~~~~~p~~g~~~~~~l~~~~~---~~--~~~---~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~~~l~~ 396 (415)
++........|++ -+.+..... .+ ..+ ...+...+ .++||.+.|... +.+ -+++.+++++|++
T Consensus 389 ~~~g~~~~~~~v~g~~-gi~f~~~~~~~~~~~~~~d~~~~~~~~~~l-~~~Gv~~~~~~~---~~~-~psl~ht~~dId~ 462 (474)
T PLN02482 389 KKAGHEMCGGYISGMF-GFFFTEGPVYNFADAKKSDTAKFARFHRGM-LEEGVYLAPSQF---EAG-FTSLAHTEEDIDF 462 (474)
T ss_pred HhcCCCEEEcccceEE-EEEEecCCccChhhhccCCHHHHHHHHHHH-HHCCeEEeccCC---CCC-cCCCCCCHHHHHH
Confidence 2221111223333 222211100 00 001 22445554 467999987432 111 1566789999999
Q ss_pred HHHHHHHHHHH
Q 014936 397 CLDRIKSFYQR 407 (415)
Q Consensus 397 ~l~~l~~~~~~ 407 (415)
+++++.+++++
T Consensus 463 ~l~al~~~l~~ 473 (474)
T PLN02482 463 TIAAAERVLAR 473 (474)
T ss_pred HHHHHHHHHHh
Confidence 99999998864
No 319
>PRK06149 hypothetical protein; Provisional
Probab=99.80 E-value=1.1e-16 Score=166.23 Aligned_cols=345 Identities=16% Similarity=0.115 Sum_probs=206.7
Q ss_pred ccCcceeEecccCCCCCCCCC-CcHHHHHHHHHHHhcCCCC-CCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCCh
Q 014936 32 KNEKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLSEKFN-GYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGC 109 (415)
Q Consensus 32 ~~~~~~i~l~~g~~~~~~~~~-~~~~~~~a~~~~~~~~~~~-~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~ 109 (415)
.+|+.++||..|.. .++ .+|++.+++.+++...... .|.. ....++.+.+++.+ +...+.++++++|
T Consensus 582 ~dG~~ylD~~~~~~----~lGh~hp~v~~Ai~~q~~~l~~~~~~~~-~~~~elae~L~~~~------p~~~~~v~f~~SG 650 (972)
T PRK06149 582 MAGRSYLDMVNNVT----VLGHGHPRLAAAAARQWSLLNTNSRFHY-AAVAEFSERLAALA------PDGLDTVFLVNSG 650 (972)
T ss_pred CCCCEEEECCCCcc----ccCCCCHHHHHHHHHHHHhccccccccC-HHHHHHHHHHHHhC------CCCcCEEEEeCCc
Confidence 34788999987653 244 6899999999988753321 1211 22344444454443 1224689999999
Q ss_pred HHHHHHHHHHhc--CCCCEEEEcCCCCcchHHHHHhC-C-----C--------eEEEeeccCC--CCCC-CC-----hhH
Q 014936 110 TQAIDVAMALLS--RPGANILLPRPGFPIYELSAAFR-H-----I--------EVRHFDLLPD--KGWE-VD-----LDD 165 (415)
Q Consensus 110 ~~al~~~~~~l~--~~gd~vi~~~p~y~~~~~~~~~~-g-----~--------~~~~~~~~~~--~~~~-~~-----~~~ 165 (415)
++|++.+++... .....|+...-+|++....+... + . .+..++.... ..+. .+ .+.
T Consensus 651 sEA~e~AlklAr~~tgr~~ii~~~~~yHG~t~ga~~~s~~~~~~~~~~~~~~~~v~~~~~p~~~~~~~~~~~~~~~~~~~ 730 (972)
T PRK06149 651 SEANDLAIRLAWAASGRRDVVSVLEAYHGWTVATDAVSTSIADNPQALETRPDWVHPVESPNTYRGRFRGADSAADYVRD 730 (972)
T ss_pred hHHHHHHHHHHHHhcCCCeEEEEeCCCCCcChhHhhhcCCccccccccCCCCCCeEEeCCCcccCCcCCCcccHHHHHHH
Confidence 999999998532 12256888888888655333111 0 0 0111211100 0011 11 233
Q ss_pred HHhhcC-----CCceEEEecCC-CCccc-cCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeE
Q 014936 166 IESLAD-----QNTVALVIINP-GNPCG-NVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPIL 238 (415)
Q Consensus 166 l~~~~~-----~~~~~v~i~~p-~nptG-~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i 238 (415)
+++.++ ....+.+|+.| ....| ...|.+.++++.++|++||+++|.||++.++...|.....+..++....++
T Consensus 731 ~~~~l~~~~~~~~~iAavI~Epv~g~gG~i~~p~~yL~~l~~lc~~~g~llI~DEV~tGfGRtG~~~~a~e~~gv~PDiv 810 (972)
T PRK06149 731 VVAQLEELDASGRGLAGFICEPVYGNAGGIALPPGYLQQVYAAVRARGGVCIADEVQVGYGRLGHYFWGFEQQGVVPDII 810 (972)
T ss_pred HHHHHHHHhhcCCceEEEEEcccccCCCcccCCHHHHHHHHHHHHHcCCEEEEEeehhcCCccCccchhhhhcCCCCCEE
Confidence 333221 23456677777 33345 457888999999999999999999999987765554322233333333333
Q ss_pred EEccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHHh--hccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHH
Q 014936 239 TLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKK--YFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSV 316 (415)
Q Consensus 239 ~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~ 316 (415)
+++|.+ ..|+.+|++++++ ++.+.+.. ....+.+.++++.+++.+.|+...++ +..++.++.-
T Consensus 811 ---t~gK~l-g~G~Pl~av~~~~--------~i~~~~~~~~~~~sT~~gnP~~~aaala~L~~i~~e---~l~~~~~~~G 875 (972)
T PRK06149 811 ---TMAKGM-GNGHPLGAVITRR--------EIAEALEAEGYFFSSTGGSPVSCRIGMAVLDVLREE---KLQENARRVG 875 (972)
T ss_pred ---Eecccc-cCCeeeEEEEEcH--------HHHhhhccCCcccCCCCCCHHHHHHHHHHHHHHHhc---CHHHHHHHHH
Confidence 679995 4679999999976 67776653 12234577899999998888653222 3344444444
Q ss_pred HHHHHHhhc----CCCCcCCCCCCCceEEEEecCcccc---CCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEee-
Q 014936 317 DICYNKIKE----IPCISCPHKPEGSMAVMLKLNLSLL---DDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFA- 388 (415)
Q Consensus 317 ~~l~~~l~~----~~~~~~~~~p~~g~~~~~~l~~~~~---~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~- 388 (415)
+++.+.|++ .|.+. . ...-|+++-+.+..... +.......+...+ .++||.+.+.... .+.+||...
T Consensus 876 ~~l~~~L~~l~~~~~~i~-~-vrG~Gl~~gvel~~~~~~~~~~~~~~~~i~~~l-~~~Gvl~~~~g~~--~~vl~~~Ppl 950 (972)
T PRK06149 876 DHLKARLEALADRHPLIG-A-VHGMGLYLGVELVRDRQTLEPATEETAAICDRL-LELGVIMQPTGDH--LNILKIKPPL 950 (972)
T ss_pred HHHHHHHHHHHHhCCCeE-E-EeecceEEEEEEecCcccCCCChHHHHHHHHHH-HhCCeEEeecCCC--CCEEEEECCC
Confidence 555555543 43332 1 34557777766632100 0000123444444 5679999874321 367998884
Q ss_pred -CChhhHHHHHHHHHHHHHH
Q 014936 389 -VDPYSLEECLDRIKSFYQR 407 (415)
Q Consensus 389 -~~~~~l~~~l~~l~~~~~~ 407 (415)
.++++++.++++|.+++.+
T Consensus 951 ~it~~~id~~~~~l~~~l~~ 970 (972)
T PRK06149 951 CLDRESADFFVDMLDRVLTE 970 (972)
T ss_pred cCCHHHHHHHHHHHHHHHHh
Confidence 7999999999999999864
No 320
>PRK07481 hypothetical protein; Provisional
Probab=99.80 E-value=1.9e-16 Score=151.49 Aligned_cols=350 Identities=15% Similarity=0.127 Sum_probs=207.2
Q ss_pred ccCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHH
Q 014936 32 KNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQ 111 (415)
Q Consensus 32 ~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~ 111 (415)
.+++.++|+..|.-.... --.+|++.+|+++++....+..... ....+.+..+|+.+.+..+ +-..+.++++++|++
T Consensus 39 ~dG~~ylD~~~g~~~~~l-Gh~~p~v~~Ai~~ql~~~~~~~~~~-~~~~~~~~~lae~L~~~~~-~~~~~~v~f~~sGsE 115 (449)
T PRK07481 39 IDGKKLLDGVGGLWNVNV-GHNREEVKEAIVRQLDELEYYSTFD-GTTHPRAIELSYELIDMFA-PEGMRRVFFSSGGSD 115 (449)
T ss_pred CCCCEEEECchhHHhhcC-CCCCHHHHHHHHHHHHhccceeccc-ccCCHHHHHHHHHHHHhcC-CCCCCEEEEcCchHH
Confidence 358889999776422111 1247899999999987533211100 0112444555555544322 112468999999999
Q ss_pred HHHHHHHHhcC-------CC-CEEEEcCCCCcchHHHHHhCCC-------------eEEEeeccCC--CCCC-CChhH--
Q 014936 112 AIDVAMALLSR-------PG-ANILLPRPGFPIYELSAAFRHI-------------EVRHFDLLPD--KGWE-VDLDD-- 165 (415)
Q Consensus 112 al~~~~~~l~~-------~g-d~vi~~~p~y~~~~~~~~~~g~-------------~~~~~~~~~~--~~~~-~~~~~-- 165 (415)
|++.+++.... +| .+|+....+|++....+...+. .+..++.+.. ..+. .|.+.
T Consensus 116 Ave~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~ga~s~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~ 195 (449)
T PRK07481 116 SVETALKLARQYWKVRGQPERTKFISLKQGYHGTHFGGASVNGNTVFRRNYEPLLPGCFHVETPWLYRNPFTEQDPEELA 195 (449)
T ss_pred HHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCcchhhhccCCCcccccccCCCCCCCEEeCCCcccccccCCCCHHHHH
Confidence 99999987541 23 5799999999986654333211 1111211100 0011 13333
Q ss_pred ------HHhhcC---CCceEEEecCC-CCccccC-CCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCC
Q 014936 166 ------IESLAD---QNTVALVIINP-GNPCGNV-YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGST 234 (415)
Q Consensus 166 ------l~~~~~---~~~~~v~i~~p-~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~ 234 (415)
+++.+. +...+.++..| +...|.+ .+.+.++++.++|++||+++|.||++.++...|.... ...++..
T Consensus 196 ~~~~~~le~~i~~~~~~~iAAviiEPvqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~a-~~~~gv~ 274 (449)
T PRK07481 196 RICARLLEREIAFQGPDTIAAFIAEPVQGAGGVIVPPANFWPLVREVCDRHGILLIADEVVTGFGRTGSWFG-SRGWGVK 274 (449)
T ss_pred HHHHHHHHHHHHhcCCCcEEEEEEecccCCcCCccCCHHHHHHHHHHHHHcCCEEEEeehhhCcCcCchhhH-hhhcCCC
Confidence 333332 23456677777 4455664 6788899999999999999999999998765554221 1223333
Q ss_pred CCeEEEccCccccCCCC-ceEEEEEeeCCCCCCChHHHHHHHHhh--------ccccCCchhHHHHHHHHhhCCCcHHHH
Q 014936 235 VPILTLGSLSKRWIVPG-WRLGWFVTTDPCGMFRKPKVVERMKKY--------FDILGDPATFIQAAVPSILQQPDEVFF 305 (415)
Q Consensus 235 ~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~a~~~~l~~~~~~~~ 305 (415)
++++ +++|.+ ..| +++|.+++++ ++.+.+... ...+++.++++.+++.+.|+...++
T Consensus 275 PDiv---~~gKgl-~gG~~Pi~av~~~~--------~i~~~~~~~~~~~~~~~h~~T~~gnpl~~aaa~a~L~~l~~~-- 340 (449)
T PRK07481 275 PDIM---CLAKGI-TSGYVPLGATMVNA--------RIADAFEANADFGGAIMHGYTYSGHPVACAAALATLDIVVRE-- 340 (449)
T ss_pred CCEE---EEeecc-cCCCcCceEEEEcH--------HHHHHHhccCccccccccCCCCCCCHHHHHHHHHHHHHHHhh--
Confidence 3333 568994 456 5999999965 677666431 1235667899998888888653221
Q ss_pred HHHHHHHHHHHHHHHHHhhc----CCCCcCCCCCCCceEEEEecCccc-cCCCCC-----HHHHHHHHHhhcCeEEEcCC
Q 014936 306 KKTLNLLKQSVDICYNKIKE----IPCISCPHKPEGSMAVMLKLNLSL-LDDIID-----DIDFCFKLAKEESVIILPGT 375 (415)
Q Consensus 306 ~~~~~~~~~~~~~l~~~l~~----~~~~~~~~~p~~g~~~~~~l~~~~-~~~~~~-----~~~~~~~ll~~~gi~v~~g~ 375 (415)
+..++.++.-+++.+.|++ .|.+. . ...-|.++.+.+.... .....+ ...+... +.++||.+.+..
T Consensus 341 -~l~~~~~~~g~~l~~~L~~l~~~~~~i~-~-vrG~Glm~gi~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~Gvl~~~~g 416 (449)
T PRK07481 341 -DLPANAAKRGAYLLEGLQPLKERFELVG-D-VRGKGLMLALDLVADKATREPIDPSKGYANAVADV-ARENGVLVRPSG 416 (449)
T ss_pred -hHHHHHHHHHHHHHHHHHHHhhcCCCeE-E-EeecceEEEEEecccccccCCCCchhHHHHHHHHH-HHhCCeEEEecC
Confidence 2334444444555555543 33222 1 2345667766663211 000001 1234444 456799998742
Q ss_pred CCCCCCeEEEEee--CChhhHHHHHHHHHHHHHHH
Q 014936 376 AVGLKNWLRVTFA--VDPYSLEECLDRIKSFYQRH 408 (415)
Q Consensus 376 ~~~~~~~iRi~~~--~~~~~l~~~l~~l~~~~~~~ 408 (415)
..+|++.. .++++++++++.|.++++++
T Consensus 417 -----~~i~l~Ppl~it~~eid~~~~~l~~~l~~~ 446 (449)
T PRK07481 417 -----TKIILSPPLVIQREDVDRIVDALDAGLSAV 446 (449)
T ss_pred -----CEEEEECCCCCCHHHHHHHHHHHHHHHHhc
Confidence 35899874 59999999999999998764
No 321
>PRK07480 putative aminotransferase; Validated
Probab=99.80 E-value=1.4e-16 Score=152.26 Aligned_cols=354 Identities=14% Similarity=0.140 Sum_probs=207.6
Q ss_pred ccCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHH
Q 014936 32 KNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQ 111 (415)
Q Consensus 32 ~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~ 111 (415)
.+++.++|+..|.-.... --.+|.+.+++++++....+.. .......+.+..+|+.+.+..+ ...+.++++++|++
T Consensus 47 ~dG~~ylD~~~g~~~~~l-Gh~~p~v~~Ai~~q~~~~~~~~-~~~~~~~~~~~~lae~L~~~~p--~~~~~v~f~~SGse 122 (456)
T PRK07480 47 SEGNKILDGMAGLWCVNV-GYGRKELADAAARQMRELPYYN-TFFKTTHPPAIELAAKLAEVAP--PGFNHVFFTNSGSE 122 (456)
T ss_pred CCCCEEEEccchHHHhcC-CCCCHHHHHHHHHHHHhcCCcc-cccccCCHHHHHHHHHHHHhCC--CCcCEEEEeCCcHH
Confidence 358889999877422111 1247999999999987532211 0001123444555555544322 23469999999999
Q ss_pred HHHHHHHHhcC-------CC-CEEEEcCCCCcchHHHHHhCCC-e------------EEEeeccCC--CCCCCC------
Q 014936 112 AIDVAMALLSR-------PG-ANILLPRPGFPIYELSAAFRHI-E------------VRHFDLLPD--KGWEVD------ 162 (415)
Q Consensus 112 al~~~~~~l~~-------~g-d~vi~~~p~y~~~~~~~~~~g~-~------------~~~~~~~~~--~~~~~~------ 162 (415)
|++.+++.... +| .+|+....+|++....+...+. . +..++.... ..+..+
T Consensus 123 A~e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~tl~a~s~~g~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~ 202 (456)
T PRK07480 123 ANDTVLRMVRHYWALKGKPQKKVIISRKNGYHGSTVAGASLGGMKYMHEQGDLPIPGIVHIDQPYWFGEGGDMTPEEFGL 202 (456)
T ss_pred HHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCcchhhhhccCChhhhcccCCCCCCCeecCCCcccccccCCChHHHHH
Confidence 99999987531 23 4688888888875543322211 0 111111000 000011
Q ss_pred --hhHHHhhcC---CCceEEEecCC-CCccccC-CCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCC
Q 014936 163 --LDDIESLAD---QNTVALVIINP-GNPCGNV-YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTV 235 (415)
Q Consensus 163 --~~~l~~~~~---~~~~~v~i~~p-~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~ 235 (415)
++.+++.+. ....+.+|..| +...|.+ .|.+.++++.++|++||+++|.||++.++...|.... ...++..+
T Consensus 203 ~~~~~l~~~~~~~~~~~vAAvi~EPiqg~gG~~~~~~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~a-~~~~gv~P 281 (456)
T PRK07480 203 AAARQLEAKILELGADNVAAFIGEPIQGAGGVIIPPATYWPEIQRICRKYDILLVADEVICGFGRTGEWFG-SQHFGIKP 281 (456)
T ss_pred HHHHHHHHHHHhcCCCcEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCcchhh-hhhcCCCC
Confidence 245554442 23455667777 4455664 6778899999999999999999999988765554321 22233322
Q ss_pred CeEEEccCccccCCCC-ceEEEEEeeCCCCCCChHHHHHHHHh----h-ccccCCchhHHHHHHHHhhCCCcHHHHHHHH
Q 014936 236 PILTLGSLSKRWIVPG-WRLGWFVTTDPCGMFRKPKVVERMKK----Y-FDILGDPATFIQAAVPSILQQPDEVFFKKTL 309 (415)
Q Consensus 236 ~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~----~-~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~ 309 (415)
.++ +++|.++ .| +++|.+++++ ++.+.+.. . ...+++.++++.+++.+.|+...++ ...
T Consensus 282 Div---~~gK~l~-gG~~Pi~av~~~~--------~i~~~~~~~~~~~~~~~T~~gnpl~~Aaa~a~L~~l~~~---~l~ 346 (456)
T PRK07480 282 DLM---TIAKGLT-SGYIPMGAVGVGD--------RVAEVLIEEGGEFNHGFTYSGHPVAAAVALANLRILRDE---GIV 346 (456)
T ss_pred Cee---eeehhhc-cCCccceEEEEcH--------HHHHHHhcCCCCcccCCCCCcCHHHHHHHHHHHHHHHhC---CHH
Confidence 333 6789954 56 4899999865 67776631 1 2235678899999999988653221 233
Q ss_pred HHH-HHHHHHHHHHhh---cCCCCcCCCCCCCceEEEEecCcccc--CCCCC---HHHHHHHHHhhcCeEEEcCCCCCCC
Q 014936 310 NLL-KQSVDICYNKIK---EIPCISCPHKPEGSMAVMLKLNLSLL--DDIID---DIDFCFKLAKEESVIILPGTAVGLK 380 (415)
Q Consensus 310 ~~~-~~~~~~l~~~l~---~~~~~~~~~~p~~g~~~~~~l~~~~~--~~~~~---~~~~~~~ll~~~gi~v~~g~~~~~~ 380 (415)
++. ++.-+++.+.|+ +.|.+. . ...-|+++-+.+..... ....+ ....+...+.++||.+.+. .
T Consensus 347 ~~~~~~~g~~l~~~l~~l~~~~~i~-~-vrG~Glm~gie~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~~~-----~ 419 (456)
T PRK07480 347 ERVRDDTGPYLQKRLRELADHPLVG-E-VRGVGLVGAIELVKDKATRERFEAGGGVGTICRDHCFANGLIMRAV-----G 419 (456)
T ss_pred HHHHHHHHHHHHHHHHHhhcCCCee-e-EEeecceEEEEEeccccccccCcchhhHHHHHHHHHHHCCcEEeec-----C
Confidence 333 233444444443 343222 1 23456676666632110 00001 1123333445679999763 2
Q ss_pred CeEEEEee--CChhhHHHHHHHHHHHHHHHHHHh
Q 014936 381 NWLRVTFA--VDPYSLEECLDRIKSFYQRHAKQL 412 (415)
Q Consensus 381 ~~iRi~~~--~~~~~l~~~l~~l~~~~~~~~~~~ 412 (415)
+.+|++.. .+++++++++++|.+++.+..+++
T Consensus 420 ~~l~~~Ppl~it~~eid~~~~~l~~al~~~~~~~ 453 (456)
T PRK07480 420 DRMIISPPLVITHAEIDELVEKARKALDATAAEL 453 (456)
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHh
Confidence 57999985 489999999999999998875543
No 322
>PRK06148 hypothetical protein; Provisional
Probab=99.79 E-value=1.5e-16 Score=165.47 Aligned_cols=345 Identities=12% Similarity=0.035 Sum_probs=209.2
Q ss_pred cCcceeEecccCCCCCCCCC-CcHHHHHHHHHHHhcCCC-CCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChH
Q 014936 33 NEKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLSEKF-NGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCT 110 (415)
Q Consensus 33 ~~~~~i~l~~g~~~~~~~~~-~~~~~~~a~~~~~~~~~~-~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~ 110 (415)
+|+.++||..|... ++ .+|++.+++++++..... ..|. .+.+..+|+.+.+..+ -..+.++++++|+
T Consensus 622 dG~~ylD~~~g~~~----lGH~hp~v~~Ai~~q~~~l~~~~~~~-----~~~~~~lAe~L~~~~p--~~~~~v~f~nSGs 690 (1013)
T PRK06148 622 RGRAYLDCFNNVCH----VGHAHPRVVAAAARQAARLNTNTRYL-----HDAIVAYAERLTATLP--DGLTVAFFVNSGS 690 (1013)
T ss_pred CCCEEEEcccChhh----cCCCCHHHHHHHHHHHhhcCCcCCcC-----CHHHHHHHHHHHHhCC--CCcCEEEEeCCcH
Confidence 47789999877522 23 579999999998875322 2232 2334444554443222 1236899999999
Q ss_pred HHHHHHHHHhcC--CCCEEEEcCCCCcchHHHHHhCCC-------------eEEEeeccC--CCCCCC-C-------hhH
Q 014936 111 QAIDVAMALLSR--PGANILLPRPGFPIYELSAAFRHI-------------EVRHFDLLP--DKGWEV-D-------LDD 165 (415)
Q Consensus 111 ~al~~~~~~l~~--~gd~vi~~~p~y~~~~~~~~~~g~-------------~~~~~~~~~--~~~~~~-~-------~~~ 165 (415)
+|++.+++.... ...+|+....+|++....+..... .+..++... ...+.. + .+.
T Consensus 691 EA~e~AlklAr~~tGr~~ii~~~~~YHG~t~~a~s~s~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 770 (1013)
T PRK06148 691 EANSLALRLARAHTGQRDAIVLDHAYHGTTTELIDLSPYKFNRKGGKGRPDHVEVAEVPDSYRGPERWPDAEHGRRFAES 770 (1013)
T ss_pred HHHHHHHHHHHHhcCCCeEEEEcCCccCCCcchhhcCchhhcccCCCCCCCCceEcCCCCccccCCCCChhhhHHHHHHH
Confidence 999999988641 235788889999876543322110 111111100 001110 1 123
Q ss_pred HHhhcC-----CCceEEEecCC-CCcccc-CCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeE
Q 014936 166 IESLAD-----QNTVALVIINP-GNPCGN-VYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPIL 238 (415)
Q Consensus 166 l~~~~~-----~~~~~v~i~~p-~nptG~-~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i 238 (415)
+++.++ ....+.+|+.| ....|. ..|.+.++++.++|+++|+++|.||++.++...|........++..+.++
T Consensus 771 l~~~i~~~~~~~~~iAAvI~EPv~g~gG~i~pp~~yl~~lr~lc~~~g~llI~DEVqtGfGRtG~~~~a~e~~gv~PDiv 850 (1013)
T PRK06148 771 VAEQIAAMAAKGRGPAFFIAESIPSVAGQIFLPEGYLREVYAMVRAAGGVCIADEVQVGFGRVGSHWWAFETQGVVPDIV 850 (1013)
T ss_pred HHHHHHhhhccCCceEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEecccCCCCCCCcchhhhhcCCCccee
Confidence 444332 13456677777 334454 56889999999999999999999999998765554222233333332333
Q ss_pred EEccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhh--ccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHH
Q 014936 239 TLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKY--FDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSV 316 (415)
Q Consensus 239 ~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~ 316 (415)
+++|.+ ..|+++|.+++++ ++.+.+... ...+++.++++.+++.+.|+...++ +..++.++.-
T Consensus 851 ---t~gK~l-ggG~Plgav~~~~--------ei~~~~~~g~~~~~Tf~gnpla~aaa~a~L~~i~~e---~l~~~~~~~G 915 (1013)
T PRK06148 851 ---TMGKPI-GNGHPMGAVVTTR--------EIADSFDNGMEYFNTFGGNPVSCAIGLAVLDIIEDE---DLQRNALEIG 915 (1013)
T ss_pred ---eecccc-cCCcceEEEEEcH--------HHHhhccCCCccccCCCCCHHHHHHHHHHHHHHhhc---cHHHHHHHHH
Confidence 678995 5689999999965 677766432 2245678999999998888653222 2334445555
Q ss_pred HHHHHHhhc----CCCCcCCCCCCCceEEEEecCccccCCCCC---HHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEe--
Q 014936 317 DICYNKIKE----IPCISCPHKPEGSMAVMLKLNLSLLDDIID---DIDFCFKLAKEESVIILPGTAVGLKNWLRVTF-- 387 (415)
Q Consensus 317 ~~l~~~l~~----~~~~~~~~~p~~g~~~~~~l~~~~~~~~~~---~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~-- 387 (415)
+++.+.|++ .|.+. . ...-|+++-+.+.........+ ...+... +.++||.+.+.... .+.+||.+
T Consensus 916 ~~l~~~L~~l~~~~~~i~-~-VrG~Gl~~gvel~~~~~~~~~~~~~~~~i~~~-~~~~Gvl~~~~g~~--~~vlr~~Ppl 990 (1013)
T PRK06148 916 NYLLAGLRELQDRFDIIG-D-VRGMGLFLGIELVTDRKTKAPATAIARYVKNG-ARERGILIGTEGPH--DNVLKIRPPL 990 (1013)
T ss_pred HHHHHHHHHHHHhCCCce-E-EeeeceEEEEEecCCccccCccHHHHHHHHHH-HHhCCeEEeccCCC--CCEEEEeCCc
Confidence 555555543 43222 1 3445777776664311100001 2234444 45679999764322 47788888
Q ss_pred eCChhhHHHHHHHHHHHHHHH
Q 014936 388 AVDPYSLEECLDRIKSFYQRH 408 (415)
Q Consensus 388 ~~~~~~l~~~l~~l~~~~~~~ 408 (415)
.++++++++++++|.+++++.
T Consensus 991 ~it~~~id~~l~~l~~~l~~~ 1011 (1013)
T PRK06148 991 IFSRADADHLLEVLDDVLAAA 1011 (1013)
T ss_pred cCCHHHHHHHHHHHHHHHHHH
Confidence 478999999999999998764
No 323
>PRK07030 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.79 E-value=1.7e-16 Score=152.05 Aligned_cols=348 Identities=13% Similarity=0.059 Sum_probs=212.1
Q ss_pred ccCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHH
Q 014936 32 KNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQ 111 (415)
Q Consensus 32 ~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~ 111 (415)
.+++.++||..|.-.... --.+|.+.+++++++....+. ... ....+.+..+++.+.+..+ ...+.++++++|++
T Consensus 44 ~dG~~ylD~~~g~~~~~l-Gh~~p~v~~Ai~~ql~~l~~~-~~~-~~~~~~~~~lae~L~~~~p--~~~~~v~f~~sGsE 118 (466)
T PRK07030 44 FEGKRYLDAVSSWWVNVF-GHANPRINQRIKDQVDQLEHV-ILA-GFSHEPVIELSERLVKITP--PGLSRCFYADNGSS 118 (466)
T ss_pred CCCCEEEEcchhHHhhcC-CCCCHHHHHHHHHHHHhcCCc-ccc-ccCCHHHHHHHHHHHHhCC--CCcCEEEEeCCcHH
Confidence 358889999877522111 124789999999998753221 110 1112444555555543221 23469999999999
Q ss_pred HHHHHHHHhcC-------CC-CEEEEcCCCCcchHHHHHhCCCe-------------EEEeeccCCC--CCCC-------
Q 014936 112 AIDVAMALLSR-------PG-ANILLPRPGFPIYELSAAFRHIE-------------VRHFDLLPDK--GWEV------- 161 (415)
Q Consensus 112 al~~~~~~l~~-------~g-d~vi~~~p~y~~~~~~~~~~g~~-------------~~~~~~~~~~--~~~~------- 161 (415)
|++.+++.... +| .+|+....+|++....+...+.. +..+|..... .++.
T Consensus 119 Ave~AlKlAr~~~~~~g~t~r~~ii~~~~~yHG~t~ga~s~~~~~~~~~~~~p~~~~~~~~p~~~~~~~~~~~~~~~~~~ 198 (466)
T PRK07030 119 AIEVALKMSFHYWRNRGKPRKKRFVTLTNSYHGETLAAMSVGDVALFTETYKPLLLDTIKVPSPDCYLRPEGMSWEEHSR 198 (466)
T ss_pred HHHHHHHHHHHHHHHhCCCCCcEEEEECCCcCcccHHHHhccCCccccccCCccCCCCEEcCCCCccccccCCCHHHHHH
Confidence 99999988631 22 57899999999876554332211 1112111000 0001
Q ss_pred -ChhHHHhhcCC--CceEEEecCC--CCcccc-CCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCC
Q 014936 162 -DLDDIESLADQ--NTVALVIINP--GNPCGN-VYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTV 235 (415)
Q Consensus 162 -~~~~l~~~~~~--~~~~v~i~~p--~nptG~-~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~ 235 (415)
+++.+++.+.. ...+.+|..| +...|. ..+.+.++++.++|+++|+++|.||++.++...|.... ...++..+
T Consensus 199 ~~l~~le~~~~~~~~~iAAvi~EP~iqg~gG~~~~~~~yl~~lr~lc~~~g~llI~DEV~TGfGRtG~~~a-~~~~gv~P 277 (466)
T PRK07030 199 RMFAHMEQTLAEHHDEIAAVIVEPLIQGAGGMRMYHPVYLKLLREACDRYGVHLIHDEIAVGFGRTGTMFA-CEQAGIRP 277 (466)
T ss_pred HHHHHHHHHHHhCCCceEEEEEecccccCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCcCccccchH-HHhcCCCC
Confidence 24556666642 3456677777 455566 46788899999999999999999999998766554221 12233333
Q ss_pred CeEEEccCccccCCCC-ceEEEEEeeCCCCCCChHHHHHHHHh--------hccccCCchhHHHHHHHHhhCCCcHHHHH
Q 014936 236 PILTLGSLSKRWIVPG-WRLGWFVTTDPCGMFRKPKVVERMKK--------YFDILGDPATFIQAAVPSILQQPDEVFFK 306 (415)
Q Consensus 236 ~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~a~~~~l~~~~~~~~~ 306 (415)
.++ +++|.+ ..| +++|.+++++ ++.+.+.. ....+++.++++.+++.+.|+...++
T Consensus 278 Div---~~gKgl-~gG~~Pi~av~~~~--------ei~~~~~~~~~~~~~~~h~~T~~gnpla~aaa~a~L~~i~~~--- 342 (466)
T PRK07030 278 DFL---CLSKAL-TGGYLPLAAVLTTD--------TVYQAFYDDYPTLRAFLHSHSYTGNPLACAAALATLDIFEQD--- 342 (466)
T ss_pred CEE---eeehhc-cCCcccceEEEecH--------HHHHHHhcccccccccccCCCCCCCHHHHHHHHHHHHHHHhc---
Confidence 344 468995 467 5999999865 67766642 12235667899999998888653221
Q ss_pred HHHHHHHHHHHHHHHHhhc---CCCCcCCCCCCCceEEEEecCccccC--CC-CC---HHHHHHHHHhhcCeEEEcCCCC
Q 014936 307 KTLNLLKQSVDICYNKIKE---IPCISCPHKPEGSMAVMLKLNLSLLD--DI-ID---DIDFCFKLAKEESVIILPGTAV 377 (415)
Q Consensus 307 ~~~~~~~~~~~~l~~~l~~---~~~~~~~~~p~~g~~~~~~l~~~~~~--~~-~~---~~~~~~~ll~~~gi~v~~g~~~ 377 (415)
+..++.++.-+++.+.|++ .|.+. . ...-|+++-+.+...... .. .+ ...+...+ .++|+.+.+..
T Consensus 343 ~l~~~~~~~G~~l~~~L~~l~~~~~v~-~-vrG~Gl~~gie~~~~~~~~~~~~~~~~~~~~i~~~~-~~~Gvl~~~~g-- 417 (466)
T PRK07030 343 NVIENNRALARRMAEATAHLADHPHVA-E-VRQTGMILAIEMVQDKASKTPYPWQERRGLKVYQHA-LERGALLRPLG-- 417 (466)
T ss_pred CHHHHHHHHHHHHHHHHHHHhcCCCEE-E-eEeceeEEEEEeccCccccccCcchhHHHHHHHHHH-HHCCeEEEecC--
Confidence 2344555555555555544 33332 1 344577777766321110 00 01 12344444 56799997632
Q ss_pred CCCCeEEEEe--eCChhhHHHHHHHHHHHHHHH
Q 014936 378 GLKNWLRVTF--AVDPYSLEECLDRIKSFYQRH 408 (415)
Q Consensus 378 ~~~~~iRi~~--~~~~~~l~~~l~~l~~~~~~~ 408 (415)
+.+|+.. ..+++++++++++|.+++++.
T Consensus 418 ---~~i~~~Ppl~it~~eid~~~~~l~~al~~~ 447 (466)
T PRK07030 418 ---SVVYFLPPYVITPEQIDFLAEVASEGIDIA 447 (466)
T ss_pred ---CEEEEECCccCCHHHHHHHHHHHHHHHHHH
Confidence 5789876 579999999999999999876
No 324
>PRK06917 hypothetical protein; Provisional
Probab=99.79 E-value=3.3e-16 Score=149.52 Aligned_cols=354 Identities=16% Similarity=0.125 Sum_probs=213.1
Q ss_pred ccCcceeEecccCCCCCCCCC-CcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChH
Q 014936 32 KNEKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCT 110 (415)
Q Consensus 32 ~~~~~~i~l~~g~~~~~~~~~-~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~ 110 (415)
.+++.++|+..|.-... ++ .+|.+.+++++++....+ .+... ...+.+..+|+.+.+..+ ...+.++++++|+
T Consensus 28 ~dG~~ylD~~~g~~~~~--lGh~hp~v~~Ai~~ql~~~~~-~~~~~-~~~~~~~~lae~L~~~~p--~~~~~v~f~~sGs 101 (447)
T PRK06917 28 QNGNKYFDGSSGAVTAG--IGHGVKEIADAIKEQAEEVSF-VYRSQ-FTSEPAEKLAKKLSDLSP--GDLNWSFFVNSGS 101 (447)
T ss_pred CCCCEEEECchhHHhcc--CCCCCHHHHHHHHHHHhhCcC-ccccc-cCCHHHHHHHHHHHHhCC--CCCCEEEEeCChH
Confidence 35889999987742211 22 479999999999886422 11110 112444455555544222 1235899999999
Q ss_pred HHHHHHHHHhc-------CCC-CEEEEcCCCCcchHHHHHhCCC-------------eEEEeeccCCCCC--C-------
Q 014936 111 QAIDVAMALLS-------RPG-ANILLPRPGFPIYELSAAFRHI-------------EVRHFDLLPDKGW--E------- 160 (415)
Q Consensus 111 ~al~~~~~~l~-------~~g-d~vi~~~p~y~~~~~~~~~~g~-------------~~~~~~~~~~~~~--~------- 160 (415)
+|++.+++... .+| .+|+....+|++....+..... .+..++....... .
T Consensus 102 EAve~AlklAr~~~~~rg~t~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 181 (447)
T PRK06917 102 EANETAMKIAIQHFQERGIQGKHKILSRWMSYHGITMGALSMSGHPLRRQRFVSLLEDYPTISAPYCYRCPVQKVYPTCQ 181 (447)
T ss_pred HHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHHhcCCccccccCCCCCCCCeEeCCCcccccccCCChHHHH
Confidence 99999999862 123 5799999999987655433211 1111111100000 0
Q ss_pred -CChhHHHhhcCC---CceEEEecCC-CC-cccc-CCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCC
Q 014936 161 -VDLDDIESLADQ---NTVALVIINP-GN-PCGN-VYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS 233 (415)
Q Consensus 161 -~~~~~l~~~~~~---~~~~v~i~~p-~n-ptG~-~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~ 233 (415)
-+++.+++.++. +..+.++..| .. ..|. ..|.+.++++.++|+++|+++|.||++.++...|.... ...++.
T Consensus 182 ~~~~~~le~~i~~~~~~~iAAvi~EPi~g~~gG~~~p~~~fl~~lr~lc~~~g~llI~DEv~tGfGRtG~~~a-~~~~gv 260 (447)
T PRK06917 182 LACATELETAIERIGAEHIAAFIAEPIIGAAGAAVVPPKGYYKVIKEICDHYDILFIADEVMTGLGRTGAMFA-MEHWGV 260 (447)
T ss_pred HHHHHHHHHHHHhcCCCceEEEEEeccccCcCceecCCHHHHHHHHHHHHHcCCEEEEechhhCcCcccchhh-HHhcCC
Confidence 023556666642 3456677777 33 3445 46789999999999999999999999988655554221 122332
Q ss_pred CCCeEEEccCccccCCCCc-eEEEEEeeCCCCCCChHHHHHHHHhh-----ccccCCchhHHHHHHHHhhCCCcHHHHHH
Q 014936 234 TVPILTLGSLSKRWIVPGW-RLGWFVTTDPCGMFRKPKVVERMKKY-----FDILGDPATFIQAAVPSILQQPDEVFFKK 307 (415)
Q Consensus 234 ~~~~i~~~s~sK~~~~~G~-r~G~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~a~~~~l~~~~~~~~~~ 307 (415)
.++++ +++|.+ ..|+ ++|.+++++ ++.+.+... ...++..++++.+++.+.|+...+ ++
T Consensus 261 ~PDi~---~~gK~l-~~G~~Pi~a~~~~~--------~i~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~l~~l~~---~~ 325 (447)
T PRK06917 261 EPDIM---TLGKGL-GAGYTPIAATVVSD--------RVMEPILRGSRSIMSGHTLSANPLSAATALAVLEYMEK---HN 325 (447)
T ss_pred CCCEE---Eeeehh-ccCCcceEEEEEcH--------HHHHHHhccCcccccccCCCCCHHHHHHHHHHHHHHHH---CC
Confidence 22333 679995 4564 899999865 677766432 113556789999888888865321 13
Q ss_pred HHHHHHHHHHHHHHHhhc----CCCCcCCCCCCCceEEEEecCcc-ccC-CCC----CHHHHHHHHHhhcCeEEEcCCCC
Q 014936 308 TLNLLKQSVDICYNKIKE----IPCISCPHKPEGSMAVMLKLNLS-LLD-DII----DDIDFCFKLAKEESVIILPGTAV 377 (415)
Q Consensus 308 ~~~~~~~~~~~l~~~l~~----~~~~~~~~~p~~g~~~~~~l~~~-~~~-~~~----~~~~~~~~ll~~~gi~v~~g~~~ 377 (415)
..++++++-++|.+.|++ .|.+. ....-|.++.+.+... ... ... ....+... +.++||.+.|...-
T Consensus 326 l~~~~~~~g~~l~~~L~~l~~~~~~i~--~vrG~Gl~~~ie~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Gvl~~~~~~~ 402 (447)
T PRK06917 326 LPEKAAEKGEYLIKGLQKVQQQSTIIG--DVRGKGLLIGVEFVADKKTKQPFSKSQAVASELISV-AAKNGLLLYPAVAG 402 (447)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCEE--EEeecceEEEEEEeccCCcCCCCcchhHHHHHHHHH-HHhCCcEEEecccc
Confidence 445555555555555544 33222 1334566666666321 000 000 12334444 45679999875211
Q ss_pred --C-CCCeEEEEee--CChhhHHHHHHHHHHHHHHHHH
Q 014936 378 --G-LKNWLRVTFA--VDPYSLEECLDRIKSFYQRHAK 410 (415)
Q Consensus 378 --~-~~~~iRi~~~--~~~~~l~~~l~~l~~~~~~~~~ 410 (415)
+ ..+.+|++.. .+++++++++++|.++++++.+
T Consensus 403 ~~g~~~~~i~l~Ppl~it~~eid~~~~~l~~~l~~~~~ 440 (447)
T PRK06917 403 QDGKEGDAVIIAPPMTITYSELDELLSIFAKSVEEMMQ 440 (447)
T ss_pred cCCCCCCEEEEECCCcCCHHHHHHHHHHHHHHHHHHHH
Confidence 1 1368999885 8999999999999999988644
No 325
>PRK07036 hypothetical protein; Provisional
Probab=99.79 E-value=2.1e-16 Score=151.48 Aligned_cols=352 Identities=14% Similarity=0.153 Sum_probs=211.7
Q ss_pred ccCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCC-CCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChH
Q 014936 32 KNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKF-NGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCT 110 (415)
Q Consensus 32 ~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~-~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~ 110 (415)
.+|+.++|+..|.-.... --.+|++.+++++++....+ ..+.. ...+.+..+|+.+.+..+ ..-+.++++++|+
T Consensus 48 ~dG~~ylD~~~g~~~~~l-Gh~~p~v~~Ai~~q~~~~~~~~~~~~--~~~~~~~~lae~L~~~~p--~~~~~v~f~~sGs 122 (466)
T PRK07036 48 ADGRRYLDGIGGMWCVNV-GYGREEMADAIADQARRLPYYTPFGD--MTNAPAAELAAKLAELAP--GDLNHVFLTTGGS 122 (466)
T ss_pred CCCCEEEECcccHHhhcC-CCCCHHHHHHHHHHHHhCcccccccc--cCCHHHHHHHHHHHHhCC--CCcCEEEEeCCch
Confidence 358889999877422211 12479999999998875321 11210 113445556666554322 2246899999999
Q ss_pred HHHHHHHHHhc------C-CC-CEEEEcCCCCcchHHHHHhCCC-------------eEEEeeccCC--CCCCCC-----
Q 014936 111 QAIDVAMALLS------R-PG-ANILLPRPGFPIYELSAAFRHI-------------EVRHFDLLPD--KGWEVD----- 162 (415)
Q Consensus 111 ~al~~~~~~l~------~-~g-d~vi~~~p~y~~~~~~~~~~g~-------------~~~~~~~~~~--~~~~~~----- 162 (415)
+|++.+++... + +| .+|+....+|++....+..... .+..++.... ..++.+
T Consensus 123 eAve~AlklAr~~~~~~g~t~r~~Ii~~~~~YHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 202 (466)
T PRK07036 123 TAVDSALRFVHYYFNVRGRPAKKHIITRGDAYHGSTYLTASLTGKAADRTEFDYASDLVHHLSSPNPYRRPAGMSEAAFC 202 (466)
T ss_pred HHHHHHHHHHHHHHHhcCCCCccEEEEEcCccCCccHhhhcccCCCcccccccCCCCCcEEecCCcccccccCCChHHHH
Confidence 99999998752 1 22 5789889999986655433211 1122221100 001111
Q ss_pred ---hhHHHhhcC---CCceEEEecCC-CCccccC-CCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCccccc-ccCC
Q 014936 163 ---LDDIESLAD---QNTVALVIINP-GNPCGNV-YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMG-VFGS 233 (415)
Q Consensus 163 ---~~~l~~~~~---~~~~~v~i~~p-~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~-~~~~ 233 (415)
++.+++.+. ....+.+|..| +...|.. .+.+.++++.++|++||+++|.||++.++...|.... .. .++.
T Consensus 203 ~~~~~~~~~~i~~~~~~~iAavi~EPv~g~gG~~~p~~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~~-~~~~~gv 281 (466)
T PRK07036 203 DFLVDEFEDKILSLGADNIAAFIAEPILGSGGVIVPPPGYHARMREICRRYDILYISDEVVTGFGRLGHFFA-SEAVFGI 281 (466)
T ss_pred HHHHHHHHHHHHHcCCCceEEEEEeCCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeechhCCCcCchhhh-hhhhcCC
Confidence 233444442 24456677777 4555664 6788899999999999999999999988765553221 12 2232
Q ss_pred CCCeEEEccCccccCCCC-ceEEEEEeeCCCCCCChHHHHHHHHhh--------ccccCCchhHHHHHHHHhhCCCcHHH
Q 014936 234 TVPILTLGSLSKRWIVPG-WRLGWFVTTDPCGMFRKPKVVERMKKY--------FDILGDPATFIQAAVPSILQQPDEVF 304 (415)
Q Consensus 234 ~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~a~~~~l~~~~~~~ 304 (415)
.+.++ +++|.+ ..| +++|.+++++ ++.+.+... ...+++.++++.+++.+.|+...+
T Consensus 282 ~PDiv---t~gK~l-~gG~~Pi~av~~~~--------~i~~~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~Le~i~~-- 347 (466)
T PRK07036 282 QPDII---TFAKGL-TSGYQPLGAVIISE--------RLLDVISGPNAKGNVFTHGFTYSGHPVACAAALKNIEIMER-- 347 (466)
T ss_pred CCCEE---EEcccc-ccCccccEEEEEcH--------HHHHHHhcccCcCcccccCCCCCCCHHHHHHHHHHHHHHHh--
Confidence 22333 578995 457 5899999865 677766421 112566789999998888865321
Q ss_pred HHHHHHHHHHHHHHHHHHhhc---CCCCcCCCCCCCceEEEEecCcccc-CCC-CC----HHHHHHHHHhhcCeEEEcCC
Q 014936 305 FKKTLNLLKQSVDICYNKIKE---IPCISCPHKPEGSMAVMLKLNLSLL-DDI-ID----DIDFCFKLAKEESVIILPGT 375 (415)
Q Consensus 305 ~~~~~~~~~~~~~~l~~~l~~---~~~~~~~~~p~~g~~~~~~l~~~~~-~~~-~~----~~~~~~~ll~~~gi~v~~g~ 375 (415)
++..++.++.-+++.+.|+. .|.+. ....-|.++.+.+..... ... .. ...+... +.++||.+.+..
T Consensus 348 -~~l~~~~~~~g~~l~~~L~~l~~~~~v~--~vrG~Gl~~~ve~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Gvl~~~~~ 423 (466)
T PRK07036 348 -EGLCEHVREVGPYFEERLASLRELPLVG--DVRGDHLMACVECVADKGSKALLPEDIAIGQRIDRH-CQERGLLVRPLE 423 (466)
T ss_pred -CCHHHHHHHHHHHHHHHHHHhccCCCEE--EEEeeceEEEEEEccCccccCCCCchhHHHHHHHHH-HHHCCcEEeecC
Confidence 23445555555555555544 33222 133456777777742110 000 01 2234444 456799997642
Q ss_pred CCCCCCeEEEEee--CChhhHHHHHHHHHHHHHHHHHHh
Q 014936 376 AVGLKNWLRVTFA--VDPYSLEECLDRIKSFYQRHAKQL 412 (415)
Q Consensus 376 ~~~~~~~iRi~~~--~~~~~l~~~l~~l~~~~~~~~~~~ 412 (415)
+.+|++.. .+++++++++++|.++++++.+.+
T Consensus 424 -----~~~~l~Ppl~it~~~id~~~~~l~~al~~~~~~~ 457 (466)
T PRK07036 424 -----HLCVLSPPLIITRAQIDEIVAILRAAIEETADEL 457 (466)
T ss_pred -----CEEEEeCCCcCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 56888874 599999999999999998875543
No 326
>cd01494 AAT_I Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis
Probab=99.79 E-value=7.7e-18 Score=140.44 Aligned_cols=166 Identities=16% Similarity=0.093 Sum_probs=129.2
Q ss_pred cHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchH-HHHHhCCCeEEEeeccCCC
Q 014936 79 LPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYE-LSAAFRHIEVRHFDLLPDK 157 (415)
Q Consensus 79 ~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~-~~~~~~g~~~~~~~~~~~~ 157 (415)
+.++++.++++++ .+.+++++++|+++++.+++.++.+++++|+++.++|++.. ..+...|.++..++.+...
T Consensus 2 ~~~~~~~l~~~~~------~~~~~~~~~~~~t~a~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~ 75 (170)
T cd01494 2 LEELEEKLARLLQ------PGNDKAVFVPSGTGANEAALLALLGPGDEVIVDANGHGSRYWVAAELAGAKPVPVPVDDAG 75 (170)
T ss_pred HHHHHHHHHHHcC------CCCCcEEEeCCcHHHHHHHHHHhCCCCCEEEEeecccceehhhHHHhcCCEEEEeccCCCC
Confidence 3678999999983 46789999999999999999999988999999999999988 7888899999998875443
Q ss_pred CCCCChhHHHhhc-CCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCC
Q 014936 158 GWEVDLDDIESLA-DQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVP 236 (415)
Q Consensus 158 ~~~~~~~~l~~~~-~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~ 236 (415)
....+.+.+++.. .++++.+++++|+|++|...+. ++|.++|+++|+++|+|++|..+...... .... ....
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~g~~~~~---~~l~~~~~~~~~~li~D~a~~~~~~~~~~-~~~~---~~~~ 148 (170)
T cd01494 76 YGGLDVAILEELKAKPNVALIVITPNTTSGGVLVPL---KEIRKIAKEYGILLLVDAASAGGASPAPG-VLIP---EGGA 148 (170)
T ss_pred ccchhhhhhhhccccCceEEEEEecCcCCCCeEcCH---HHHHHHHHHcCCEEEEecccccccccccc-cccc---cccC
Confidence 3323333554433 4578889999999999999764 78888888999999999999987755322 0111 1123
Q ss_pred eEEEccCccccCCCCceEEEEEe
Q 014936 237 ILTLGSLSKRWIVPGWRLGWFVT 259 (415)
Q Consensus 237 ~i~~~s~sK~~~~~G~r~G~~~~ 259 (415)
.+++.|++|.++. .++|++++
T Consensus 149 d~~~~s~~K~~~~--~~~G~l~~ 169 (170)
T cd01494 149 DVVTFSLHKNLGG--EGGGVVIV 169 (170)
T ss_pred CEEEEEcccccCC--CceEEEEe
Confidence 4778899999765 66999876
No 327
>TIGR00508 bioA adenosylmethionine-8-amino-7-oxononanoate transaminase. All members of the seed alignment have been demonstrated experimentally to act as EC 2.6.1.62, an enzyme in the biotin biosynthetic pathway. Alternate names include 7,8-diaminopelargonic acid aminotransferase, DAPA aminotransferase, and adenosylmethionine-8-amino-7-oxononanoate aminotransferase. The gene symbol is bioA in E. coli and BIO3 in S. cerevisiae.
Probab=99.79 E-value=1e-16 Score=152.40 Aligned_cols=340 Identities=15% Similarity=0.105 Sum_probs=208.2
Q ss_pred cCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCC--CCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChH
Q 014936 33 NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGY--APTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCT 110 (415)
Q Consensus 33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y--~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~ 110 (415)
+++.++||..|......+ -.+|++.+++.+++........ .......++-+.+++.. + ..-+.++++++|+
T Consensus 43 dG~~ylD~~~g~~~~~lG-h~~p~v~~ai~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~----~--~~~~~v~f~~sGs 115 (427)
T TIGR00508 43 DGRRLIDGMSSWWAAIHG-YNHPRLNAAAQKQIDKMSHVMFGGFTHKPAIELCQKLVKMT----P--NALDCVFLADSGS 115 (427)
T ss_pred CCCEEEEccchHHHhcCC-CCCHHHHHHHHHHHHhcCCccccccCCHHHHHHHHHHHhhC----C--CCCCEEEEeCCcH
Confidence 478899998875322222 3578999999998875321111 11112234444444433 2 2236999999999
Q ss_pred HHHHHHHHHhcC-------CC-CEEEEcCCCCcchHHHHHhC-CCe-------------EEEeeccCCCCCC-----CCh
Q 014936 111 QAIDVAMALLSR-------PG-ANILLPRPGFPIYELSAAFR-HIE-------------VRHFDLLPDKGWE-----VDL 163 (415)
Q Consensus 111 ~al~~~~~~l~~-------~g-d~vi~~~p~y~~~~~~~~~~-g~~-------------~~~~~~~~~~~~~-----~~~ 163 (415)
++++.+++.... +| .+|+....+|++....+... +.. +..++. +...+. -|+
T Consensus 116 eA~e~AlklAr~~~~~~~~~~r~~il~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~-p~~~~~~~~~~~~~ 194 (427)
T TIGR00508 116 VAVEVALKMALQYWQAKGEKNRQKFLTIRSGYHGDTFGAMSVCDPENSMHSLYKGYLPEQIFAPA-PQNRFDEEWNEEAI 194 (427)
T ss_pred HHHHHHHHHHHHHHHhhCCCCccEEEEEcCCcCCccHhhhcccCCcccccccccccCCCCeEcCC-CCccccchhHHHHH
Confidence 999999987541 23 57999999999865444322 211 011111 101110 145
Q ss_pred hHHHhhcCC--CceEEEecCC--CCcccc-CCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeE
Q 014936 164 DDIESLADQ--NTVALVIINP--GNPCGN-VYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPIL 238 (415)
Q Consensus 164 ~~l~~~~~~--~~~~v~i~~p--~nptG~-~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i 238 (415)
+++++.+.. ...+.+++.| ++..|. ..+.+.+++|.++|+++|+++|+||++.++...|..... ..++....++
T Consensus 195 ~~l~~~l~~~~~~vaavivEPv~~g~gG~~~~~~~~l~~l~~lc~~~~~llI~DEv~tG~Gr~G~~~~~-~~~~v~pDi~ 273 (427)
T TIGR00508 195 TPLAKLMELHSDEIAAVILEPIVQGAGGMRFYHPTYLKRVQALCKQYDILLIADEIATGFGRTGKLFAC-EHAGVVPDIL 273 (427)
T ss_pred HHHHHHHHhcCCcEEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCCccchh-hhcCCCCCEE
Confidence 666666642 3456677777 455555 457899999999999999999999999776555543221 1222222233
Q ss_pred EEccCccccCCCC-ceEEEEEeeCCCCCCChHHHHHHHHhh------ccccCCchhHHHHHHHHhhCCCcHHHHHHHHHH
Q 014936 239 TLGSLSKRWIVPG-WRLGWFVTTDPCGMFRKPKVVERMKKY------FDILGDPATFIQAAVPSILQQPDEVFFKKTLNL 311 (415)
Q Consensus 239 ~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~ 311 (415)
+++|.+ ..| +.++.++.++ ++.+.++.. ...++..++++..++.+.|+...+ ++..++
T Consensus 274 ---~~gK~l-~gG~~p~~a~~~~~--------~~~~~~~~~~~~~~~~~~T~~g~p~~~aaa~a~l~~l~~---~~~~~~ 338 (427)
T TIGR00508 274 ---CVGKAL-TGGYMTLSATVTTD--------KVAQTISSGEAGCFMHGPTFMGNPLACAVAEASLAILLE---GEWQKQ 338 (427)
T ss_pred ---Eechhh-hcCcccceEEEEcH--------HHHHHHhcCCCCccccCCCCCcCHHHHHHHHHHHHHHHh---CCHHHH
Confidence 379997 567 4788888754 577776542 112345688888888888764221 134567
Q ss_pred HHHHHHHHHHHhhcCCCCcCC-CCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEee--
Q 014936 312 LKQSVDICYNKIKEIPCISCP-HKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFA-- 388 (415)
Q Consensus 312 ~~~~~~~l~~~l~~~~~~~~~-~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~-- 388 (415)
++++.+++.+.|+++.....+ ....-|.++.+.+... .....+...+ .++||.+.+.. ..+|++..
T Consensus 339 ~~~~~~~l~~~L~~l~~~~~i~~vrg~G~~~~i~~~~~-----~~~~~~~~~l-~~~Gv~~~~~~-----~~l~~~ppl~ 407 (427)
T TIGR00508 339 VSAIENQLKRELSPLRKNPVVKDVRVLGAIGVVEMYKP-----VNVEELQKKF-VEQGVWIRPFG-----KLIYVMPPYI 407 (427)
T ss_pred HHHHHHHHHHHHHHhhcCCCEEeEeccccEEEEEECCc-----cCHHHHHHHH-HHCCeEEEecC-----CEEEEECCCC
Confidence 777777777777765211101 0122366666666421 1244555555 56799997642 47899885
Q ss_pred CChhhHHHHHHHHHHHHHH
Q 014936 389 VDPYSLEECLDRIKSFYQR 407 (415)
Q Consensus 389 ~~~~~l~~~l~~l~~~~~~ 407 (415)
++++++++++++|++++++
T Consensus 408 ~t~~~id~~~~~l~~~l~~ 426 (427)
T TIGR00508 408 ITTEQLQKLTAALIEALHE 426 (427)
T ss_pred CCHHHHHHHHHHHHHHHhc
Confidence 7899999999999998854
No 328
>PRK06916 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.79 E-value=1.8e-16 Score=151.88 Aligned_cols=346 Identities=16% Similarity=0.135 Sum_probs=208.8
Q ss_pred cCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCC-CCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHH
Q 014936 33 NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFN-GYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQ 111 (415)
Q Consensus 33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~-~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~ 111 (415)
+++.++|+..|.-.... --.+|.+.+++++++....+. ... ...+.+..+|+.+.+..+ ...+.++++++|++
T Consensus 54 dG~~ylD~~~g~~~~~l-Gh~~p~v~~Ai~~ql~~l~~~~~~~---~~~~~~~~lae~L~~~~p--~~~~~v~f~~SGse 127 (460)
T PRK06916 54 NGNEYYDGVSSIWLNVH-GHQVPELDEAIREQLNKIAHSTLLG---LANVPSILLAEKLIEVVP--EGLKKVFYSDSGAT 127 (460)
T ss_pred CCCEEEEcchhHHHhhc-CCCCHHHHHHHHHHHHhCCCccccc---cCCHHHHHHHHHHHHhCC--CCCCEEEEeCCcHH
Confidence 47788898766421111 124789999999998752211 110 012333444444443222 22368999999999
Q ss_pred HHHHHHHHhcC-------CC-CEEEEcCCCCcchHHHHHhCCC-------------eEEEeeccCCC--CCC--------
Q 014936 112 AIDVAMALLSR-------PG-ANILLPRPGFPIYELSAAFRHI-------------EVRHFDLLPDK--GWE-------- 160 (415)
Q Consensus 112 al~~~~~~l~~-------~g-d~vi~~~p~y~~~~~~~~~~g~-------------~~~~~~~~~~~--~~~-------- 160 (415)
|++.+++.... +| .+|+....+|++....+...+. .+..+|..... .+.
T Consensus 128 Ave~AlklAr~~~~~~g~tgr~~ii~~~~~YHG~t~~als~s~~~~~~~~~~~~~~~~~~~p~p~~~~~~~~~~~~~~~~ 207 (460)
T PRK06916 128 AVEIAIKMAFQYWQNKGKPKKQRFVTLKNAYHGDTIGAVSVGAIDLFHQVYSSLLFEAIKMPYPYTYRSPYGNDKAEIVK 207 (460)
T ss_pred HHHHHHHHHHHHHHhcCCCCCcEEEEECCcCCcccHHhHhccCCcccccccCCCCCCCEEeCCCcccccccCCChHHHHH
Confidence 99999987642 33 5799999999986654433221 11122211000 001
Q ss_pred CChhHHHhhcCC--CceEEEecCC--CCccccC-CCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCC
Q 014936 161 VDLDDIESLADQ--NTVALVIINP--GNPCGNV-YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTV 235 (415)
Q Consensus 161 ~~~~~l~~~~~~--~~~~v~i~~p--~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~ 235 (415)
-+++.+++.++. ...+.+|..| +...|.+ .|.+.++++.++|+++|+++|.||++.++...|.... ...++..+
T Consensus 208 ~~~~~l~~~l~~~~~~iAAvi~EP~iqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~TG~GRtG~~~a-~~~~gv~P 286 (460)
T PRK06916 208 KHLEELEELLKEKHEEIAAIIVEPLVQGAGGMITMPKGYLKGLRNLCTKYNVLFITDEVATGFGRTGKMFA-CEHENVTP 286 (460)
T ss_pred HHHHHHHHHHHhCCCcEEEEEEeccccCCCCcccCCHHHHHHHHHHHHHcCCEEEeechhhCCCcCchhhH-HHhcCCCC
Confidence 124556666642 3456677777 5566765 6889999999999999999999999988755554221 22233222
Q ss_pred CeEEEccCccccCCCC-ceEEEEEeeCCCCCCChHHHHHHHHh-------h-ccccCCchhHHHHHHHHhhCCCcHHHHH
Q 014936 236 PILTLGSLSKRWIVPG-WRLGWFVTTDPCGMFRKPKVVERMKK-------Y-FDILGDPATFIQAAVPSILQQPDEVFFK 306 (415)
Q Consensus 236 ~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~-------~-~~~~~~~~~~~~~a~~~~l~~~~~~~~~ 306 (415)
.++ +++|.+ ..| +++|.+++++ ++.+.+.. . ...+.+.++++..++.+.|+...+ +
T Consensus 287 Div---~~gK~l-~gG~~Pi~av~~~~--------ei~~~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~l~~l~~---~ 351 (460)
T PRK06916 287 DIM---TAGKGL-TGGYLPIAITVTTD--------EIYNAFYGDYEEQKTFFHGHSYTGNPLGCAVALANLELYEK---T 351 (460)
T ss_pred Cee---eeehhh-hcCccccceeeecH--------HHHHHhhccccccCccccCCCCCCCHHHHHHHHHHHHHHHh---c
Confidence 333 578995 467 5999999865 56665532 1 123456788998888888864322 2
Q ss_pred HHHHHHHHHHHHHHHHhhcC---CCCcCCCCCCCceEEEEecCcccc-CCC-C-C---HHHHHHHHHhhcCeEEEcCCCC
Q 014936 307 KTLNLLKQSVDICYNKIKEI---PCISCPHKPEGSMAVMLKLNLSLL-DDI-I-D---DIDFCFKLAKEESVIILPGTAV 377 (415)
Q Consensus 307 ~~~~~~~~~~~~l~~~l~~~---~~~~~~~~p~~g~~~~~~l~~~~~-~~~-~-~---~~~~~~~ll~~~gi~v~~g~~~ 377 (415)
...++++++-+++.+.|+++ +.+. ....-|.++-+.+..... .+. . + ...+... +.++||.+.|..
T Consensus 352 ~l~~~~~~~g~~l~~~l~~l~~~~~v~--~vrG~Glm~giel~~~~~~~~~~~~~~~~~~~i~~~-~~~~Gvl~~~~g-- 426 (460)
T PRK06916 352 NLIEQVARKTEYVATQLEDLFALKHVG--DIRQLGLMVGIELVKNKETKEPFEWTERVGVQVCKR-SRELGMLTRPLG-- 426 (460)
T ss_pred cHHHHHHHHHHHHHHHHHHhhcCCCeE--EeecCCceeeEEeecccccccCCCchhhHHHHHHHH-HHHCCeEEEecC--
Confidence 34455666666666666654 3222 123446666665632110 000 0 0 1234444 456799998742
Q ss_pred CCCCeEEEEe--eCChhhHHHHHHHHHHHHHHH
Q 014936 378 GLKNWLRVTF--AVDPYSLEECLDRIKSFYQRH 408 (415)
Q Consensus 378 ~~~~~iRi~~--~~~~~~l~~~l~~l~~~~~~~ 408 (415)
+.+|+.. ..+++++++++++|.++++++
T Consensus 427 ---~~l~~~Ppl~it~~~id~~~~~l~~~l~~~ 456 (460)
T PRK06916 427 ---NTIVFMPPLASTIDELDEMLRILYKAISDV 456 (460)
T ss_pred ---CEEEEeCCcccCHHHHHHHHHHHHHHHHhh
Confidence 5788886 578999999999999998753
No 329
>COG0076 GadB Glutamate decarboxylase and related PLP-dependent proteins [Amino acid transport and metabolism]
Probab=99.79 E-value=1.1e-16 Score=151.37 Aligned_cols=279 Identities=16% Similarity=0.125 Sum_probs=201.1
Q ss_pred CCCcHHHHHHHHHHHhcCC--CCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCC-----
Q 014936 51 FHTTHVATEAVAEALLSEK--FNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRP----- 123 (415)
Q Consensus 51 ~~~~~~~~~a~~~~~~~~~--~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~----- 123 (415)
..+++...+++...+..+. +..|+ +..++++.+.+++.+.++.+ ..-.-.+|+|+|+++.+++.+..+.
T Consensus 72 ~~~~~~a~~~~~~~~~~nl~d~~~~p---~a~~~E~~~v~~l~~l~~~~-~~~~G~~t~GgTean~lal~aar~~~~~~~ 147 (460)
T COG0076 72 TRVPPVAAELLVSALNKNLGDPDESP---AAAELEERVVNMLSDLLGAP-EEASGTFTSGGTEANLLALLAARERWRKRA 147 (460)
T ss_pred CCCHHHHHHHHHHHHhhcCCCcccCh---hHHHHHHHHHHHHHHHhCCC-CCCceEEEcChHHHHHHHHHHHHHHHHHHh
Confidence 3456777788877777542 22333 56899999999999988855 3445689999999999888775321
Q ss_pred ---C------CEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceE--EEecCCCCccccCCCH
Q 014936 124 ---G------ANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVA--LVIINPGNPCGNVYSY 192 (415)
Q Consensus 124 ---g------d~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~--v~i~~p~nptG~~~~~ 192 (415)
+ .+|+++.-.|.++...+...|++...++.++. ++.+|++++++++++.+.. |+-+-++.++|.+
T Consensus 148 ~~~~~~~~~~P~ii~s~~aH~s~~Kaa~~lG~~~~~v~~~~~-~~~id~~~l~~~i~~~t~~g~vV~~aGtT~~G~i--- 223 (460)
T COG0076 148 LAESGKPGGKPNIVCSETAHFSFEKAARYLGLGLRRVPTVPT-DYRIDVDALEEAIDENTIGGVVVGTAGTTDTGSI--- 223 (460)
T ss_pred hhcccccCCCCeEEecCcchhHHHHHHHHhCCCceeEEeccC-ccccCHHHHHHHHHhhccCceEEEEecCCCCCcc---
Confidence 1 16999999999999999999999999998875 6789999999999988776 8888889999999
Q ss_pred HHHHHHHHHHhhcCcEEEEccccCCcccC-CCCccc-ccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHH
Q 014936 193 QHLQKLAETANKLKTLVIADEVYGHLVFG-DKPFVP-MGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPK 270 (415)
Q Consensus 193 ~~l~~i~~~~~~~~~~li~De~~~~~~~~-~~~~~~-~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~ 270 (415)
+++++|+++|+++++++++|.+++++... ...... ...+.. -.-+..+++|. +..-+.+||++.++++ .
T Consensus 224 Ddi~~ia~ia~~~~i~lHVDAA~GG~~~pf~~~~~~~~f~l~~--vdSIt~d~HK~-g~aP~~~G~il~rd~e------~ 294 (460)
T COG0076 224 DDIEELADIAEEYGIWLHVDAAFGGFLLPFLEPDGRWDFGLEG--VDSITVDGHKY-GLAPIGCGVVLFRDEE------A 294 (460)
T ss_pred CCHHHHHHHHHHcCCcEEEEccccceeecccCccchhhcCCCC--ceEEEECcccc-cCCCCCceEEEEECHH------H
Confidence 99999999999999999999999988743 111111 111111 12334489998 7877889999998853 2
Q ss_pred HHHHHHhhc---------ccc--CCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCce
Q 014936 271 VVERMKKYF---------DIL--GDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSM 339 (415)
Q Consensus 271 ~~~~~~~~~---------~~~--~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~ 339 (415)
+.+.+.... +.+ ++.+.....++...+.....+.+.++.++..+.++++.+.|++.+.++.+..| ..+
T Consensus 295 l~~~~~~~~~yl~~~~~~~~ti~~sr~~~~~~~~~~~l~~lG~eGy~~l~~~~~~~a~~la~~l~~~~~~e~~~~p-~l~ 373 (460)
T COG0076 295 LRRILIFADYYLPGGGIPNFTILGSRPGRQALALYANLRRLGREGYRKLLDRTLELARYLAEELEKLGDFELVNEP-ELP 373 (460)
T ss_pred hhhhhhcccccCCCCCcCceeEeeccchHHHHHHHHHHHHhCHhHHHHHHHHHHHHHHHHHHHHHhCCCcEeecCC-ccc
Confidence 333332110 001 11112122333333444445788999999999999999999999778855445 555
Q ss_pred EEEEecCc
Q 014936 340 AVMLKLNL 347 (415)
Q Consensus 340 ~~~~~l~~ 347 (415)
.+.+++++
T Consensus 374 ~V~fr~~~ 381 (460)
T COG0076 374 IVAFRLKD 381 (460)
T ss_pred eEEEEcCC
Confidence 66667743
No 330
>PRK06938 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=99.78 E-value=7.4e-16 Score=147.53 Aligned_cols=353 Identities=15% Similarity=0.090 Sum_probs=208.6
Q ss_pred ccCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCC-CCcEEEe-CCh
Q 014936 32 KNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLT-PNDVFVT-SGC 109 (415)
Q Consensus 32 ~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~-~~~i~i~-~g~ 109 (415)
.+|+.++|+..|.-.... --.+|.+.+++++++......... ....+.+..+|+.+....+.... .+.++++ ++|
T Consensus 60 ~dG~~ylD~~~g~~~~~l-Gh~~p~v~~Ai~~ql~~~~~~~~~--~~~~~~~~~la~~L~~~~p~~~~~~~~v~f~~~SG 136 (464)
T PRK06938 60 VEGRQFIDCLAGAGTLAL-GHNHPVVIEAIQQVLADELPLHTL--DLTTPVKDQFVQDLFASLPEAFAREAKIQFCGPTG 136 (464)
T ss_pred CCCCEEEEccCCcccccc-CCCCHHHHHHHHHHHHhhhccccc--ccCCHHHHHHHHHHHHhCcccccccceEEEeCCCc
Confidence 347889999777532211 124789999999988642211110 01123444455555432221111 1356565 799
Q ss_pred HHHHHHHHHHhcC-CC-CEEEEcCCCCcchHHHHHhCCC-------------eEEEeeccCCC--CCC--------CChh
Q 014936 110 TQAIDVAMALLSR-PG-ANILLPRPGFPIYELSAAFRHI-------------EVRHFDLLPDK--GWE--------VDLD 164 (415)
Q Consensus 110 ~~al~~~~~~l~~-~g-d~vi~~~p~y~~~~~~~~~~g~-------------~~~~~~~~~~~--~~~--------~~~~ 164 (415)
++|++.+++.... .| .+|+....+|++....+..... ++..++..... .++ .+++
T Consensus 137 SEAve~AlklAr~~tgr~~ii~~~~~yHG~t~~als~t~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 216 (464)
T PRK06938 137 TDAVEAALKLVKTATGRSTVLSFQGGYHGMSQGALSLMGNLGPKKPLGALLPGVQFLPYPYDYRCPFGLGGEAGVRANLH 216 (464)
T ss_pred HHHHHHHHHHHHHhhCCCeEEEECCccCCccHHHHhhcCCccccccCCCCCCCcEEeCCCccccccccCchhhHHHHHHH
Confidence 9999999987641 23 5788889999987655433211 12222221100 000 1256
Q ss_pred HHHhhcCC-----CceEEEecCC-CCccccC-CCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCe
Q 014936 165 DIESLADQ-----NTVALVIINP-GNPCGNV-YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPI 237 (415)
Q Consensus 165 ~l~~~~~~-----~~~~v~i~~p-~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~ 237 (415)
.+++.++. ...+.+|..| +...|.+ .|.+.++++.++|+++|+++|.||++.++...|... ....++..+.+
T Consensus 217 ~l~~~i~~~~~~~~~iAAvI~EPiqg~gG~~~p~~~yl~~lr~lc~~~giLlI~DEV~tGfGRtG~~~-a~e~~gv~PDi 295 (464)
T PRK06938 217 YLENLLDDPESGVVLPAAVILEVVQGEGGVIPAPIEWLRGLRRITEEAGIPLIVDEIQSGFGRTGKMF-AFEHAGIIPDV 295 (464)
T ss_pred HHHHHHHhhccCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCcHHH-HHHhcCCCCCE
Confidence 67777653 1356677777 4445665 568999999999999999999999999876555422 12223333334
Q ss_pred EEEccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhh-ccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHH
Q 014936 238 LTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKY-FDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSV 316 (415)
Q Consensus 238 i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~ 316 (415)
+ +++|.+ ..|+++|.+++++ ++ +.+... ...++..++++.+++.+.|+...++ +..++.++.-
T Consensus 296 v---~~gKgl-ggG~PlsAv~~~~--------~~-~~~~~~~~~~T~~gnpla~Aaa~a~L~~l~~~---~l~~~~~~~G 359 (464)
T PRK06938 296 V---VLSKAI-GGSLPLAVVVYRE--------WL-DTWQPGAHAGTFRGNQMAMAAGSATLRYIKEH---RLAEHAAAMG 359 (464)
T ss_pred E---Eeeccc-cCCCceEEEeehh--------Hh-hccCCCCCCCCCCcCHHHHHHHHHHHHHHHHh---HHHHHHHHHH
Confidence 4 468995 4689999999865 32 333222 2245678899999998888653322 2334444444
Q ss_pred HHHHHHhhc----CCCCcCCCCCCCceEEEEecCcc-ccCC----CC-C---HHHHHHHHHhhcCeEEEcCCCCCCCCeE
Q 014936 317 DICYNKIKE----IPCISCPHKPEGSMAVMLKLNLS-LLDD----II-D---DIDFCFKLAKEESVIILPGTAVGLKNWL 383 (415)
Q Consensus 317 ~~l~~~l~~----~~~~~~~~~p~~g~~~~~~l~~~-~~~~----~~-~---~~~~~~~ll~~~gi~v~~g~~~~~~~~i 383 (415)
+++.+.|++ .|.+. ....-|+++-+.+... ...+ .. + ...+...+ .++|+.+.++..+ .+.+
T Consensus 360 ~~l~~~L~~l~~~~~~i~--~VrG~Glm~gie~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~Gll~~~~g~~--~~~l 434 (464)
T PRK06938 360 ERLREHLRQLQRDYPQLG--DVRGRGLMLGVEIVDPQGEPDALGHPPANGELASLIQREC-LRRGLILELGGRH--GSVV 434 (464)
T ss_pred HHHHHHHHHHHHhCCCee--eeeccceEEEEEeccCcccccccccCCccHHHHHHHHHHH-HHCCeEEeecCCC--CCEE
Confidence 445444443 44332 1345577777776321 1000 00 0 12344444 5679999875322 3679
Q ss_pred EEEe--eCChhhHHHHHHHHHHHHHHHH
Q 014936 384 RVTF--AVDPYSLEECLDRIKSFYQRHA 409 (415)
Q Consensus 384 Ri~~--~~~~~~l~~~l~~l~~~~~~~~ 409 (415)
|+.. ..++++++++++++.+++.+..
T Consensus 435 ~~~Ppl~it~~eid~~~~~l~~~l~~~~ 462 (464)
T PRK06938 435 RFLPPLIITAEQIDEVAEIFAEAVAAAV 462 (464)
T ss_pred EEECCCccCHHHHHHHHHHHHHHHHHHh
Confidence 9976 5799999999999999997643
No 331
>KOG1357 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.78 E-value=6.7e-18 Score=150.93 Aligned_cols=334 Identities=12% Similarity=0.117 Sum_probs=223.2
Q ss_pred ceeEecccCCC-C-CCCCCCcHHHHHHHHHHHhc-C-CCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHH
Q 014936 36 KVISLAMGDPT-V-HSCFHTTHVATEAVAEALLS-E-KFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQ 111 (415)
Q Consensus 36 ~~i~l~~g~~~-~-~~~~~~~~~~~~a~~~~~~~-~-~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~ 111 (415)
.++|+++-+-- . ....+..+.+.+++...-.. + ....-+...-+.++++.+|+|++ .++.+++..| -.
T Consensus 137 ~~lNlgSYNYLGFa~~~g~ca~~~~~~~~kygl~~css~~e~G~~~~hkelE~l~A~f~g-------~e~a~vF~mG-f~ 208 (519)
T KOG1357|consen 137 RCLNLGSYNYLGFAQSVGPCAEASLKSFDKYGLSRCSSRHEAGTTEEHKELEELVARFLG-------VEDAIVFSMG-FA 208 (519)
T ss_pred eeeeecccccccccccCCcCChHHHHHHHHhcccccccchhcccHHHHHHHHHHHHHhcC-------CcceEEEecc-cc
Confidence 46777665511 0 01245567788877775332 1 11222344456788888888873 5677777776 56
Q ss_pred HHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCC-------C-----ceEEEe
Q 014936 112 AIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ-------N-----TVALVI 179 (415)
Q Consensus 112 al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~-------~-----~~~v~i 179 (415)
.+.+.+.++++||.-|+.++..|.++...++..|+.++.+.++ |++.||+.+++ + .+.+++
T Consensus 209 TNs~~~p~l~~~gsLIiSDelNHaSi~~GaRLSgAtiRVfkHN-------dm~~LEr~Lrd~I~~gqP~Thrp~kki~ii 281 (519)
T KOG1357|consen 209 TNSMNIPSLLGKGSLIISDELNHASLITGARLSGATTRVFRHN-------DMQGLERLLRDAIVYGQPKTHRPWKKILIC 281 (519)
T ss_pred ccccCcceeecCCcceeeccccchheeccccccCceEEEEecC-------CHHHHHHHHHHHHhcCCCCcCCcchheeee
Confidence 6667788899999999999999999999999999999998873 45555555432 1 234444
Q ss_pred cCC-CCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCC--CCcccccccCCCCCeEEEccCccccCCCCceEEE
Q 014936 180 INP-GNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGD--KPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGW 256 (415)
Q Consensus 180 ~~p-~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~--~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~ 256 (415)
..- ...-|.+ ..+.+++++++++..+++.||+|+..+.+. .+...+...++.+..|.+++|.|+|++.| |+
T Consensus 282 vegiysmEg~i---v~Lp~vvalkkkykayl~lDEAHSiGA~g~tGrgvce~~g~d~~dvDImMGtftKSfga~G---Gy 355 (519)
T KOG1357|consen 282 VEGIYSMEGTI---VDLPEVVALKKKYKAYLYLDEAHSIGAMGATGRGVCEYFGVDPEDVDIMMGTFTKSFGAAG---GY 355 (519)
T ss_pred eccceeccCee---cccHHHHHhhccccEEEEeeccccccccCCCCcceeeccCCCchhheeecceehhhccccc---ce
Confidence 433 3466776 679999999999999999999999988653 33333444455556799999999999998 99
Q ss_pred EEeeCCCCCCChHHHHHHHHhhcc----ccCCchhHHHHHHHHhhCC----CcHHHHHHHHHHHHHHHHHHHHHhhcCCC
Q 014936 257 FVTTDPCGMFRKPKVVERMKKYFD----ILGDPATFIQAAVPSILQQ----PDEVFFKKTLNLLKQSVDICYNKIKEIPC 328 (415)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~a~~~~l~~----~~~~~~~~~~~~~~~~~~~l~~~l~~~~~ 328 (415)
+.+++ ++++.++.... .+..++++.|..+.. ++. ...+..++..++++++..+++..+... +
T Consensus 356 iagsk--------~lid~lrt~s~~~~yat~~sppvaqq~~ss-l~~i~G~dgt~~g~~k~~~l~~ns~yfr~~l~~~-g 425 (519)
T KOG1357|consen 356 IAGSK--------ELIDYLRTPSPSALYATSLSPPVAQQILTS-VKHIMGEDGTNRGRQKIERLAENSRYFRWELQKM-G 425 (519)
T ss_pred ecCcH--------HHHhhhccCCCceeecccCChHHHHHHHHH-HHhhcCCCcccHHHHHHHHHHhhhHHHHHhhhcC-c
Confidence 99876 67887766532 123345555544433 222 123667888899999999999999988 6
Q ss_pred CcCCCCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCC-C--CCeEEEEee--CChhhHHHHHHHHHH
Q 014936 329 ISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVG-L--KNWLRVTFA--VDPYSLEECLDRIKS 403 (415)
Q Consensus 329 ~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~-~--~~~iRi~~~--~~~~~l~~~l~~l~~ 403 (415)
+.++ ....+..+.+-+-.+ ..-..+-++++++ +|.++-..++. . ...+|++.+ ++.|+++.+++.+.+
T Consensus 426 fivy-G~~dSpVvplll~~~-----~k~~~f~r~~l~~-nigvVvvgfPatpl~e~r~R~c~Sa~ht~e~ld~~l~~i~~ 498 (519)
T KOG1357|consen 426 FIVY-GNNDSPVVPLLLYGP-----AKIVAFSREMLER-NIGVVVVGFPATPLLESRARFCLSASHTKEDLDRALEVIDR 498 (519)
T ss_pred EEEe-cCCCCCcceeeecCc-----ccccHHHHHHHhc-CceEEEEeCCCchHHHhHHHhhhcccccHHHHHHHHHHHhh
Confidence 6633 444443322222111 1234555666655 66655443322 2 567888884 688999999999887
Q ss_pred HHHH
Q 014936 404 FYQR 407 (415)
Q Consensus 404 ~~~~ 407 (415)
.-+.
T Consensus 499 ~g~~ 502 (519)
T KOG1357|consen 499 VGDE 502 (519)
T ss_pred hchh
Confidence 7544
No 332
>PRK07483 hypothetical protein; Provisional
Probab=99.78 E-value=6.8e-16 Score=147.23 Aligned_cols=351 Identities=14% Similarity=0.140 Sum_probs=209.4
Q ss_pred cCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHH
Q 014936 33 NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQA 112 (415)
Q Consensus 33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~a 112 (415)
+++.++||..|.-.... --.+|.+.++++++++...+..... ...+....+|+.+.+..+ -..+.++++++|++|
T Consensus 28 dG~~ylD~~~g~~~~~l-Gh~~p~v~~av~~ql~~~~~~~~~~--~~~~~~~~lae~L~~~~p--~~~~~v~f~~sGsEA 102 (443)
T PRK07483 28 TGKRYLDASGGAAVSCL-GHSHPRVIAAIHAQIDRLAYAHTSF--FTTEPAEALADRLVAAAP--AGLEHVYFVSGGSEA 102 (443)
T ss_pred CCCEEEEcCccHhhhcc-CCCCHHHHHHHHHHHHhccCccccc--cCCHHHHHHHHHHHHhCC--CCCCEEEEcCCcHHH
Confidence 48899999887422111 1247899999999988532111110 112344455555543221 123699999999999
Q ss_pred HHHHHHHhcC-------CC-CEEEEcCCCCcchHHHHHhCCC-------------eEEEeeccCCCCCCC----------
Q 014936 113 IDVAMALLSR-------PG-ANILLPRPGFPIYELSAAFRHI-------------EVRHFDLLPDKGWEV---------- 161 (415)
Q Consensus 113 l~~~~~~l~~-------~g-d~vi~~~p~y~~~~~~~~~~g~-------------~~~~~~~~~~~~~~~---------- 161 (415)
++.+++.... +| .+|+....+|++....+..... .+..++.. ..+..
T Consensus 103 ve~AlklAr~~~~~~g~~~r~~Ii~~~~~YHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~~--~~~~~~~~~~~~~~~ 180 (443)
T PRK07483 103 VEAALKLARQYFVEIGQPQRRHFIARRQSYHGNTLGALAIGGNAWRREPFAPLLIEAHHVSPC--YAYREQRAGESDEAY 180 (443)
T ss_pred HHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCcCHHHhhhcCCcccccccCCCCCCCEEeCCC--ccccccccCCCHHHH
Confidence 9999987541 33 4689989999887554433211 11112111 00110
Q ss_pred ---ChhHHHhhcC---CCceEEEecCCCC--cccc-CCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccC
Q 014936 162 ---DLDDIESLAD---QNTVALVIINPGN--PCGN-VYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFG 232 (415)
Q Consensus 162 ---~~~~l~~~~~---~~~~~v~i~~p~n--ptG~-~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~ 232 (415)
.++.+++.+. ....+.++..|-. ..|. ..+.+.++++.++|++||+++|.||++.++...|... ....++
T Consensus 181 ~~~~~~~l~~~~~~~~~~~iAAvivEPiqg~~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfGRtG~~~-a~~~~g 259 (443)
T PRK07483 181 GQRLADELEAKILELGPDTVAAFVAETVVGATAGAVPPVPGYFKRIREVCDRYGVLLILDEVMCGMGRTGTLF-ACEEDG 259 (443)
T ss_pred HHHHHHHHHHHHHhcCCCceEEEEEeCcccCcCCeEeCCHHHHHHHHHHHHHhCCEEEEecceeCcccCcHHH-HHhhcC
Confidence 0245665443 2345567777732 2354 5678899999999999999999999999876555422 122233
Q ss_pred CCCCeEEEccCccccCCCCc-eEEEEEeeCCCCCCChHHHHHHHHhh-----ccccCCchhHHHHHHHHhhCCCcHHHHH
Q 014936 233 STVPILTLGSLSKRWIVPGW-RLGWFVTTDPCGMFRKPKVVERMKKY-----FDILGDPATFIQAAVPSILQQPDEVFFK 306 (415)
Q Consensus 233 ~~~~~i~~~s~sK~~~~~G~-r~G~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~a~~~~l~~~~~~~~~ 306 (415)
..++++ +++|.+ ..|+ ++|.+++++ ++.+.+... ...++..++++.+++.+.|+...++
T Consensus 260 v~PDiv---~~gK~l-~gG~~Pi~av~~~~--------~i~~~~~~~~~~~~h~~T~~gnpl~~aaa~a~l~~i~~~--- 324 (443)
T PRK07483 260 VAPDLV---TIAKGL-GAGYQPIGAVLASD--------RIYDAIADGSGFFQHGHTYLGHATACAAALAVQRVIAED--- 324 (443)
T ss_pred CCCCee---eehhhh-ccCccccEEEEEcH--------HHHHHHhcCCCccccCCCCCCCHHHHHHHHHHHHHHHhc---
Confidence 333333 568994 5675 999999976 676666432 1235678899998888888653221
Q ss_pred HHHHHHHHHHHHHHHHhh----cCCCCcCCCCCCCceEEEEecCcccc--CCCC---C-HHHHHHHHHhhcCeEEEcCCC
Q 014936 307 KTLNLLKQSVDICYNKIK----EIPCISCPHKPEGSMAVMLKLNLSLL--DDII---D-DIDFCFKLAKEESVIILPGTA 376 (415)
Q Consensus 307 ~~~~~~~~~~~~l~~~l~----~~~~~~~~~~p~~g~~~~~~l~~~~~--~~~~---~-~~~~~~~ll~~~gi~v~~g~~ 376 (415)
+..++.++.-+++.+.|+ +.|.+. ....-|+++-+.+..... .... . ...+...+ .++|+.+.+...
T Consensus 325 ~l~~~~~~~g~~l~~~L~~l~~~~~~i~--~vRG~Glm~gie~~~~~~~~~~~~~~~~~~~~~~~~~-~~~Gll~~~~~~ 401 (443)
T PRK07483 325 GLLANVRARGEQLRARLRERLGQHPHVG--DIRGRGLFVGVELVADRATKAPFDPALKLHARIKREA-MARGLMVYPMGG 401 (443)
T ss_pred CHHHHHHHHHHHHHHHHHHHHhcCCCee--eEeecccEEEEEEeecccccCCCCchhhHHHHHHHHH-HHCCcEEEecCc
Confidence 233444444444444443 444332 134556666666632110 0000 0 12344444 567999986432
Q ss_pred C--C-CCCeEEEEe--eCChhhHHHHHHHHHHHHHHHH
Q 014936 377 V--G-LKNWLRVTF--AVDPYSLEECLDRIKSFYQRHA 409 (415)
Q Consensus 377 ~--~-~~~~iRi~~--~~~~~~l~~~l~~l~~~~~~~~ 409 (415)
. + ..+.+|+.. ..+++++++++++|.+++.+..
T Consensus 402 ~~~~~~~~~l~~~PpL~it~~eid~~~~~l~~~l~~~~ 439 (443)
T PRK07483 402 TIDGVRGDHVLLAPPFIITAAQIDEIVERLGDAIDAAL 439 (443)
T ss_pred cccCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 1 1 136899988 4789999999999999998754
No 333
>COG0112 GlyA Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=99.77 E-value=7.6e-16 Score=136.56 Aligned_cols=338 Identities=15% Similarity=0.115 Sum_probs=221.6
Q ss_pred cceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCC------CCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCC
Q 014936 35 KKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNG------YAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSG 108 (415)
Q Consensus 35 ~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~------y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g 108 (415)
+..|+|-... .-.++.+.++.-+.+.+....+ |+-.+-..+++....+..++.+|. +-.++--.|
T Consensus 26 ~~~ieLIASE------N~~S~aV~~A~gS~ltnKYAEGyPgkRyYgGce~VD~vE~laierak~LFga--~~anVQPhS- 96 (413)
T COG0112 26 REHIELIASE------NFTSPAVMEAQGSDLTNKYAEGYPGKRYYGGCEYVDEVEELAIERAKKLFGA--EYANVQPHS- 96 (413)
T ss_pred hhceeeeecc------ccCCHHHHHHHhhhhhhccccCCCCccccCCCeeHHHHHHHHHHHHHHHhCC--CccccCCCC-
Confidence 4567775554 3457899999888776532222 333334455666555666555552 333454444
Q ss_pred hHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHH---HhCC--CeEEEeeccCCCCCCCChhHHHhhcCC-CceEEEecCC
Q 014936 109 CTQAIDVAMALLSRPGANILLPRPGFPIYELSA---AFRH--IEVRHFDLLPDKGWEVDLDDIESLADQ-NTVALVIINP 182 (415)
Q Consensus 109 ~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~---~~~g--~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~v~i~~p 182 (415)
|++|+..++.++.+|||+|+-.+..+.++.... ...| .+.+.++++++ +..+|.|++++...+ ++|+++....
T Consensus 97 Gs~AN~av~~All~pGDtimgm~l~~GGHltHg~~v~~sG~~~~~v~Y~vd~e-t~~IDyD~~~k~a~e~kPK~ii~G~S 175 (413)
T COG0112 97 GSQANQAVYLALLQPGDTIMGLDLSHGGHLTHGSPVNFSGKLFNVVSYGVDPE-TGLIDYDEVEKLAKEVKPKLIIAGGS 175 (413)
T ss_pred chHHHHHHHHHHcCCCCeEecccCCCCCcccCCCCCCccceeEEeEecccccc-cCccCHHHHHHHHHHhCCCEEEECcc
Confidence 577888899999999999998888877654322 1122 46666777664 346999999987654 6776665432
Q ss_pred CCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcc-cCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeC
Q 014936 183 GNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLV-FGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTD 261 (415)
Q Consensus 183 ~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~-~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~ 261 (415)
..| -.-+.+++.++|++-|.++++|-+|-.+. -+|..+.|+.. . -|+.+|.+|+ +.|.|-|.+.+++
T Consensus 176 aY~-----r~id~~~~reIad~VGA~L~~DmAHiaGLVA~G~~p~P~~~--A---dvVTtTTHKT--lrGPrGG~Il~~~ 243 (413)
T COG0112 176 AYS-----RPIDFKRFREIADEVGAYLMVDMAHVAGLIAGGVHPNPLPH--A---DVVTTTTHKT--LRGPRGGIILTND 243 (413)
T ss_pred ccc-----cccCHHHHHHHHHHhCceEEehHHHHHHHHhcccCCCCCCc--c---ceEeCCcccC--CCCCCceEEEecc
Confidence 222 22357888888889999999999995444 44444444433 1 1888999999 6788889998865
Q ss_pred CCCCCChHHHHHHHHhhccccCCchh--HHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCce
Q 014936 262 PCGMFRKPKVVERMKKYFDILGDPAT--FIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSM 339 (415)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~ 339 (415)
.++.++++.........+| ...++.+.++.+..+..+++..+++.++++.|.+.|.+. |+.++..-....
T Consensus 244 -------eel~kkin~aVFPg~qggpl~HviAakaVa~~Eal~p~fk~Ya~qVv~NAkaLAe~l~~~-G~~vvsGgTdnH 315 (413)
T COG0112 244 -------EELAKKINSAVFPGLQGGPLMHVIAAKAVAFKEALEPEFKEYAKQVVKNAKALAEALKER-GFKVVSGGTDNH 315 (413)
T ss_pred -------HHHHHHhhhhcCCccCCChHHHHHHHHHHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHc-CCeEecCCccce
Confidence 2688888876443333333 333333334443333557888899999999999999987 888553344456
Q ss_pred EEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCC------CCCeEEEEe------eCChhhHHHHHHHHHHHHHH
Q 014936 340 AVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVG------LKNWLRVTF------AVDPYSLEECLDRIKSFYQR 407 (415)
Q Consensus 340 ~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~------~~~~iRi~~------~~~~~~l~~~l~~l~~~~~~ 407 (415)
.+.+++... +. ....+..+|.+.||.+.--..+. .++.|||.. +..++++++..+.|.+++..
T Consensus 316 l~lVDl~~~---~~--~Gk~ae~~L~~~~It~NKN~iP~D~~~p~~tSGIRiGtpa~TtrG~~e~e~~~Ia~~I~~vl~~ 390 (413)
T COG0112 316 LVLVDLRSK---GL--TGKKAEAALERAGITVNKNAIPFDPESPFVTSGIRIGTPAVTTRGFGEAEMEEIADLIADVLDG 390 (413)
T ss_pred EEEEEcccC---CC--CHHHHHHHHHHcCEeeccCCCCCCCCCCCCCccceeccHHHhhcCCCHHHHHHHHHHHHHHHhc
Confidence 677777621 11 34456777889999996443322 267899988 23567888888888887764
No 334
>PRK04311 selenocysteine synthase; Provisional
Probab=99.77 E-value=1.3e-15 Score=144.57 Aligned_cols=321 Identities=16% Similarity=0.092 Sum_probs=192.7
Q ss_pred CCCcHHHHHHHHHHHhcCCCCCCCC-----CCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCC
Q 014936 51 FHTTHVATEAVAEALLSEKFNGYAP-----TAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGA 125 (415)
Q Consensus 51 ~~~~~~~~~a~~~~~~~~~~~~y~~-----~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd 125 (415)
.+.++.+.+++.+.+.......|.- ..-+..+++.+++++ ..+..++++++++|+..++.++ .+||
T Consensus 96 s~l~~~v~eav~~~~~~~~~le~~l~~g~~g~r~~~~e~~lA~l~--------Gae~a~vv~sgtaAl~l~l~~l-~~Gd 166 (464)
T PRK04311 96 ALLSEAAIEAVTEAARGYSNLEYDLATGKRGSRDRALAALLCALT--------GAEDALVVNNNAAAVLLALNAL-AAGK 166 (464)
T ss_pred CCCCHHHHHHHHHHHhcccccccchhhcccchHHHHHHHHHHHHh--------CCCeEEEECCHHHHHHHHHHHh-CCCC
Confidence 3467889999988876432112211 112357888888887 3446788888999999888765 7899
Q ss_pred EEEEcCCCCcc------hHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCc--cccCCCHHHHHH
Q 014936 126 NILLPRPGFPI------YELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNP--CGNVYSYQHLQK 197 (415)
Q Consensus 126 ~vi~~~p~y~~------~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~np--tG~~~~~~~l~~ 197 (415)
+|+++...+.. +.......|++++.++.+. ..++++++++++++|+++++++++|| +|..- ..++++
T Consensus 167 eVIvs~~e~~~~ggs~~i~~~~~~~G~~l~~v~~~~----~t~~~dle~aI~~~TklV~~vh~sN~~i~G~~~-~~dl~e 241 (464)
T PRK04311 167 EVIVSRGELVEIGGAFRIPDVMRQAGARLVEVGTTN----RTHLRDYEQAINENTALLLKVHTSNYRIEGFTK-EVSLAE 241 (464)
T ss_pred EEEEcchhhhhcCcchhhHHHHHHCCcEEEEECCCC----CCCHHHHHHhcCccCeEEEEEcCCCccccccCC-cCCHHH
Confidence 99999864431 2345677899998887532 25789999999999999999999998 35321 146899
Q ss_pred HHHHHhhcCcEEEEccccCCcc----cCCCCcccccc---cCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHH
Q 014936 198 LAETANKLKTLVIADEVYGHLV----FGDKPFVPMGV---FGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPK 270 (415)
Q Consensus 198 i~~~~~~~~~~li~De~~~~~~----~~~~~~~~~~~---~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~ 270 (415)
|+++|+++|+++++|...+.+. ++-.....+.. .+.+ ++++|.+|.++.+ ..|++++++ +
T Consensus 242 I~~lak~~gi~vivD~gsG~l~~~~~~gl~~~p~~~~~l~~GaD---iv~fSg~K~LgGp--~~G~i~g~~--------~ 308 (464)
T PRK04311 242 LAALGKEHGLPVVYDLGSGSLVDLSQYGLPDEPTVQELLAAGVD---LVTFSGDKLLGGP--QAGIIVGKK--------E 308 (464)
T ss_pred HHHHHHHcCCeEEEECCCcccccchhccCCCCCchhhHHhcCCc---EEEecCcccccCC--ceEEEEEcH--------H
Confidence 9999999999999999654331 11001111222 2333 8889999987655 488888854 5
Q ss_pred HHHHHHhhc-cccCCchhHHHHH----HHHhhCCCc-------HHHHHHHHHHHHHHHHHHHHHhhcCC--CC--cCC-C
Q 014936 271 VVERMKKYF-DILGDPATFIQAA----VPSILQQPD-------EVFFKKTLNLLKQSVDICYNKIKEIP--CI--SCP-H 333 (415)
Q Consensus 271 ~~~~~~~~~-~~~~~~~~~~~~a----~~~~l~~~~-------~~~~~~~~~~~~~~~~~l~~~l~~~~--~~--~~~-~ 333 (415)
++++++... ............+ +..++.... -.-+....++++++.+.+.+.|+..+ ++ .+. .
T Consensus 309 li~~l~~~~~~r~lr~dk~~l~~l~~~l~~~~~~~~~~~~i~~l~~l~~~~~~~~~~A~~la~~L~~~~~~~~~~~~~~~ 388 (464)
T PRK04311 309 LIARLKKHPLKRALRVDKLTLAALEATLRLYLDPEKLAEEIPTLRLLTRSPEELRARAERLAAALKAALGAAFAVEVVPS 388 (464)
T ss_pred HHHHHhhchhHHHHhcchHHHHHHHHHHHHHhChhhhhhhCcHHHHhcCCHHHHHHHHHHHHHHHHhccCCCeeEEEEEc
Confidence 666665321 1011112222222 222222110 01233344677778888888887643 21 111 0
Q ss_pred --------CCCCceE-EEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEe-eCChhhHHHHHHHHHH
Q 014936 334 --------KPEGSMA-VMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTF-AVDPYSLEECLDRIKS 403 (415)
Q Consensus 334 --------~p~~g~~-~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~-~~~~~~l~~~l~~l~~ 403 (415)
.|...+. +-+.++.. + .+..++... |++....+..- -.++.+.+.+ +..+++++..+++|.+
T Consensus 389 ~~~~gggs~p~~~~~~~~v~~~~~---~-~~~~~l~~~-lr~~~~~i~~r---~~~~~~~ld~r~~~~~~~~~~~~~~~~ 460 (464)
T PRK04311 389 FSQVGGGSLPVDRLPSAAVTLTPK---D-RSLEALAAR-LRLLPPPVIGR---IEDGRLLLDLRTLEEEDEERLAAALLE 460 (464)
T ss_pred cCccCCCCCcCCCCCeEEEEEeCC---C-CCHHHHHHH-HhcCCCCEEEE---EECCEEEEEeCcCCHHHHHHHHHHHHH
Confidence 1111111 11223221 1 134555444 46644333221 1257788888 5788899999999887
Q ss_pred HHH
Q 014936 404 FYQ 406 (415)
Q Consensus 404 ~~~ 406 (415)
++.
T Consensus 461 ~~~ 463 (464)
T PRK04311 461 ALN 463 (464)
T ss_pred Hhh
Confidence 753
No 335
>PRK06931 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=99.77 E-value=2.4e-15 Score=143.99 Aligned_cols=354 Identities=16% Similarity=0.107 Sum_probs=205.4
Q ss_pred ccCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCC-CcEEEeCChH
Q 014936 32 KNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTP-NDVFVTSGCT 110 (415)
Q Consensus 32 ~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~-~~i~i~~g~~ 110 (415)
.+|+.++||..|.-.... --.+|++.+++++++......... ....+.+..+|+.+.+..+..... ..++++++|+
T Consensus 55 ~dG~~ylD~~~g~~~~~l-GH~~p~v~~Ai~~q~~~~~~~~~~--~~~~~~~~~lAe~L~~~~p~~~~~~~~~f~~~SGs 131 (459)
T PRK06931 55 VEGNQYLDCLAGAGTLAL-GHNHPDVLQSIQDVLTSGLPLHTL--DLTTPLKDAFSEYLLSLLPGQGKEYCLQFTGPSGA 131 (459)
T ss_pred CCCCEEEEcccchhhccC-CCCCHHHHHHHHHHHhhhcccccc--ccCCHHHHHHHHHHHHhCCCccccceEEEeCCCcH
Confidence 347889999888532211 124789999999988743211111 112355556666665433211111 2346668999
Q ss_pred HHHHHHHHHhc--CCCCEEEEcCCCCcchHHHHHhCCC-------------eEEEeeccCCC--CCC----CChhHH---
Q 014936 111 QAIDVAMALLS--RPGANILLPRPGFPIYELSAAFRHI-------------EVRHFDLLPDK--GWE----VDLDDI--- 166 (415)
Q Consensus 111 ~al~~~~~~l~--~~gd~vi~~~p~y~~~~~~~~~~g~-------------~~~~~~~~~~~--~~~----~~~~~l--- 166 (415)
+|++.+++... ....+|+....+|++....+...+. .+..++..... .++ -+.+.+
T Consensus 132 EAve~AlklAr~~tgr~~Ii~~~~~yHG~t~~als~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (459)
T PRK06931 132 DAVEAAIKLAKTYTGRSNVISFSGGYHGMTHGALAVTGNLSPKNAVNGLMPGVQFMPYPHEYRCPLGIGGEAGVKALTYY 211 (459)
T ss_pred HHHHHHHHHHHHhcCCCeEEEECCCcCCccHHHHhhcCCcccccCCCCCCCCcEEeCCCccccccccCCchhHHHHHHHH
Confidence 99999998754 2235799999999987766543211 12222211000 000 012222
Q ss_pred -HhhcC-----CCceEEEecCC-CCccccC-CCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeE
Q 014936 167 -ESLAD-----QNTVALVIINP-GNPCGNV-YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPIL 238 (415)
Q Consensus 167 -~~~~~-----~~~~~v~i~~p-~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i 238 (415)
++.++ ....+.+|..| +...|.+ .|.+.++++.++|++||+++|.||++.++...|.. .....++..+.++
T Consensus 212 ~~~~~~~~~~~~~~iAAvI~EPiqg~gG~~~~~~~yl~~lr~lc~~~g~LlI~DEV~tGfGRtG~~-~a~~~~gv~PDiv 290 (459)
T PRK06931 212 FENFIEDVESGVRKPAAVILEAIQGEGGVNPAPVEWLQKIREVTQKHGILLIVDEVQAGFARTGKM-FAFEHAGIEPDII 290 (459)
T ss_pred HHHHHHhhhcCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecchhcCCcCchH-HHhhhcCCCCCEE
Confidence 23322 12355677777 4445654 67899999999999999999999999987655542 1222233333333
Q ss_pred EEccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhh-ccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHH
Q 014936 239 TLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKY-FDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVD 317 (415)
Q Consensus 239 ~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~ 317 (415)
+++|.+ ..|+++|.++.++ + ++.+... ...++..++++.+++.+.|+...++ +..++.++.-+
T Consensus 291 ---t~gK~l-~gG~Pi~av~~~~--------~-~~~~~~~~~~~T~~gnpla~aaala~L~~l~~~---~l~~~~~~~G~ 354 (459)
T PRK06931 291 ---VMSKAV-GGGLPLAVLGIKK--------E-FDAWQPGGHTGTFRGNQLAMATGLTTLKILKEE---NLAQNAAERGE 354 (459)
T ss_pred ---Eecccc-cCCcceeeeeeHH--------H-HhhccCCCCCCCCCCCHHHHHHHHHHHHHHHhC---CHHHHHHHHHH
Confidence 568995 5679999988754 2 2444222 2235678999999888888653221 22333333334
Q ss_pred HHHHHhh----cCCCCcCCCCCCCceEEEEecCccc-cC----CCC-C---HHHHHHHHHhhcCeEEEcCCCCCCCCeEE
Q 014936 318 ICYNKIK----EIPCISCPHKPEGSMAVMLKLNLSL-LD----DII-D---DIDFCFKLAKEESVIILPGTAVGLKNWLR 384 (415)
Q Consensus 318 ~l~~~l~----~~~~~~~~~~p~~g~~~~~~l~~~~-~~----~~~-~---~~~~~~~ll~~~gi~v~~g~~~~~~~~iR 384 (415)
++.+.|+ +.|.+. ....-|+++-+.+.... .. ... + ...+... +.++||.+.+.... .+.+|
T Consensus 355 ~l~~~L~~l~~~~~~i~--~vrG~Glm~giel~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Gvl~~~~~~~--~~~l~ 429 (459)
T PRK06931 355 WLKAQLAELQKRYPCIG--NVRGRGLMIGIEIVDERQPADAMGSYPADGELAAAIQKA-CFENGLLLERGGRN--GNVVR 429 (459)
T ss_pred HHHHHHHHHHHhCCCeE--eEecCceEEEEEEccCcccccccccCCccHHHHHHHHHH-HHHCCcEEeecCCC--CCEEE
Confidence 4444443 444332 13455777777663211 00 000 1 1233344 45679999775322 36788
Q ss_pred EEe--eCChhhHHHHHHHHHHHHHHHHH
Q 014936 385 VTF--AVDPYSLEECLDRIKSFYQRHAK 410 (415)
Q Consensus 385 i~~--~~~~~~l~~~l~~l~~~~~~~~~ 410 (415)
+.+ ..+++++++++++|.+++++..+
T Consensus 430 ~~Ppl~it~~eid~~~~~l~~~l~~~~~ 457 (459)
T PRK06931 430 LLPPLLITQAECEEFIDRFEQALLAAVK 457 (459)
T ss_pred EECCCCcCHHHHHHHHHHHHHHHHHHHh
Confidence 887 47999999999999999987654
No 336
>KOG1404 consensus Alanine-glyoxylate aminotransferase AGT2 [Amino acid transport and metabolism]
Probab=99.77 E-value=2e-16 Score=139.24 Aligned_cols=342 Identities=17% Similarity=0.117 Sum_probs=221.1
Q ss_pred ccCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcC--CCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCCh
Q 014936 32 KNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSE--KFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGC 109 (415)
Q Consensus 32 ~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~--~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~ 109 (415)
.+++.++|+-.|...... --.+|.+.+++.+++..- ....|..+ -..++.+.+++.+ +-+-+.++++|++
T Consensus 47 e~G~ryLD~f~Gi~tvsl-GHchP~v~~a~~kQl~~l~H~t~~~~~~-pi~~~Ae~L~s~~------P~~l~~vfF~nsG 118 (442)
T KOG1404|consen 47 EEGRRYLDAFGGIVTVSL-GHCHPDVVAAAVKQLKKLYHTTSGYLNP-PIHDLAEALVSKL------PGDLKVVFFVNSG 118 (442)
T ss_pred CCCceeehhhCCeEEEEc-CCCChHHHHHHHHhhhhhEEeeccccCC-cHHHHHHHHHHhC------CCCceEEEEecCC
Confidence 357788888888644321 235799999998887542 23455553 3578888888887 3455679999999
Q ss_pred HHHHHHHHHHhc-CCC-CEEEEcCCCCcchHHHHHhC-CCeEEEe--ecc---------C--CC-CCCCC---------h
Q 014936 110 TQAIDVAMALLS-RPG-ANILLPRPGFPIYELSAAFR-HIEVRHF--DLL---------P--DK-GWEVD---------L 163 (415)
Q Consensus 110 ~~al~~~~~~l~-~~g-d~vi~~~p~y~~~~~~~~~~-g~~~~~~--~~~---------~--~~-~~~~~---------~ 163 (415)
++|++++++... ..| -.||....+|++....+... +...... |.. | .. -|+-+ .
T Consensus 119 sEANelal~mar~Yt~~~diIa~r~~YHG~t~~t~glt~~~~~k~~~~~~~~~~~~~~~Pdp~r~~~~~~~~~e~~d~~a 198 (442)
T KOG1404|consen 119 SEANELALKMARLYTGNLDIIARRNSYHGNTLYTLGLTGLSPWKQNFPGVASGVHHTMNPDPYRGIFGGSNEEEASDRYA 198 (442)
T ss_pred chHHHHHHHHHHHhcCCceEEEeeccccCCchhhcccccCCcccccCCCCCCcccccCCCCcccccCCCCchhhhHHHHH
Confidence 999999988754 112 36777778887655443222 2211111 100 0 00 01111 1
Q ss_pred hHHHhhc---CCCceEEEecCC-CCccccC-CCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeE
Q 014936 164 DDIESLA---DQNTVALVIINP-GNPCGNV-YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPIL 238 (415)
Q Consensus 164 ~~l~~~~---~~~~~~v~i~~p-~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i 238 (415)
++++..+ .+.+.+.++..+ +...|++ +++.-+++..++|+++|.++|.||++.++...| . +..+...+-+-
T Consensus 199 ~~l~d~i~~~~~~~vAafiaEtIqGvgG~v~~p~GYlka~~~~v~k~Ggl~IaDEVqtGfGRtG-~---~wgfe~h~v~P 274 (442)
T KOG1404|consen 199 KELEDLILYDGPETVAAFIAETIQGVGGIVELPPGYLKAAYKVVRKRGGLFIADEVQTGFGRTG-H---MWGFESHGVVP 274 (442)
T ss_pred HHHHHHHHhcCCCceeEEEeehhccCCccccCCchHHHHHHHHHHHcCCEEEehhhhhcccccc-c---cccccccCCCc
Confidence 2333333 245566777777 5556765 888999999999999999999999999988776 3 44454444455
Q ss_pred EEccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhhc--cccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHH
Q 014936 239 TLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYF--DILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSV 316 (415)
Q Consensus 239 ~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~ 316 (415)
-|-|++|. ...|+++|.+++.. ++.+-+.+.. ..+...+|++.++..+.|+...++.+. +..+..-
T Consensus 275 DIvTmAKg-iGnG~Pl~AVvtt~--------EIa~v~~~~~~~fnTyggnP~a~avg~aVL~Vikee~Lq---E~aa~vG 342 (442)
T KOG1404|consen 275 DIVTMAKG-IGNGFPLGAVVTTP--------EIADVLNQKSSHFNTYGGNPVACAVGLAVLKVIKEENLQ---ENAAEVG 342 (442)
T ss_pred cHHHHHhh-ccCCCcceeeecCH--------HHHHHHHhccccccccCCCchhHHHHHHHHHHHHHHhHH---HHHHHHH
Confidence 56699999 56779999999865 7888887664 345778999999888888764444444 4444455
Q ss_pred HHHHHHhhcC----CCCcCCCCCCCceEEEEecCccccCCC--C-CHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEe--
Q 014936 317 DICYNKIKEI----PCISCPHKPEGSMAVMLKLNLSLLDDI--I-DDIDFCFKLAKEESVIILPGTAVGLKNWLRVTF-- 387 (415)
Q Consensus 317 ~~l~~~l~~~----~~~~~~~~p~~g~~~~~~l~~~~~~~~--~-~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~-- 387 (415)
.+|.+.|.++ |-+- . ...-|+++=+++-..+.+.. + ....++.+.++++|+.|.-|..++. .+||+.
T Consensus 343 ~yl~~~l~~l~d~h~iIG-d-VRG~GLm~GvE~V~dk~~~~pp~~~~~~~i~~~cke~Gvlvg~g~i~G~--vfriaPPl 418 (442)
T KOG1404|consen 343 SYLLEKLAALKDKHPIIG-D-VRGRGLMLGVELVSDKSEPKPPATAEGAVIGEQCKELGVLVGKGGIHGN--VFRIAPPL 418 (442)
T ss_pred HHHHHHHHHHhhcCCcee-e-cccceeEEEEEEecccCCCCCcchHHHHHHHHHHHHhCeeeecccccce--EEEecCCe
Confidence 5555555543 3222 1 34557776665532221110 1 1234555566889999988877774 899998
Q ss_pred eCChhhHHHHHHHH
Q 014936 388 AVDPYSLEECLDRI 401 (415)
Q Consensus 388 ~~~~~~l~~~l~~l 401 (415)
..+++|++.+++..
T Consensus 419 ciT~edi~f~~~~~ 432 (442)
T KOG1404|consen 419 CITKEDIDFAVEYF 432 (442)
T ss_pred eccHHHHHHHHHHH
Confidence 57999997776654
No 337
>PF00464 SHMT: Serine hydroxymethyltransferase; InterPro: IPR001085 Synonym(s): Serine hydroxymethyltransferase, Serine aldolase, Threonine aldolase Serine hydroxymethyltransferase (SHMT) is a pyridoxal phosphate (PLP) dependent enzyme and belongs to the aspartate aminotransferase superfamily (fold type I) []. The pyridoxal-P group is attached to a lysine residue around which the sequence is highly conserved in all forms of the enzyme []. The enzyme carries out interconversion of serine and glycine using PLP as the cofactor. SHMT catalyses the transfer of a hydroxymethyl group from N5, N10- methylene tetrahydrofolate to glycine, resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers and the mammalian enzyme forms a homotetramer [, ]. PLP dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalysed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis has revealed that the PLP dependent enzymes can be classified into four major groups of different evolutionary origin: aspartate aminotransferase superfamily (fold type I), tryptophan synthase beta superfamily (fold type II), alanine racemase superfamily (fold type III), D-amino acid superfamily (fold type IV) and glycogen phophorylase family (fold type V) [, ]. In vertebrates, glycine hydroxymethyltransferase exists in a cytoplasmic and a mitochondrial form whereas only one form is found in prokaryotes.; GO: 0004372 glycine hydroxymethyltransferase activity, 0006544 glycine metabolic process, 0006563 L-serine metabolic process; PDB: 3GBX_B 3H7F_A 1YJS_A 2VMW_A 2W7H_A 2W7E_A 2VMY_B 2W7L_A 2VMZ_A 2VMS_A ....
Probab=99.76 E-value=1e-16 Score=147.27 Aligned_cols=339 Identities=17% Similarity=0.121 Sum_probs=194.0
Q ss_pred cceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCC------CCCCcHHHHHHHHHHHhhhCCCCCCCC--cEEE-
Q 014936 35 KKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYA------PTAGLPLTRRAIAEYLSRDLPYKLTPN--DVFV- 105 (415)
Q Consensus 35 ~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~------~~~g~~~lr~~ia~~~~~~~~~~~~~~--~i~i- 105 (415)
+..++|-... ...+|.+.+++...+.+.....|+ -..-..++++...+...+.++. +++ .+-+
T Consensus 20 ~~~l~LiaSE------N~~Sp~v~~al~S~l~nkyaeg~pg~ryy~G~~~id~iE~la~~ra~~lF~~--~~~~w~anvq 91 (399)
T PF00464_consen 20 RSTLNLIASE------NYMSPAVREALGSDLTNKYAEGYPGKRYYGGCEYIDEIEELAIERAKELFGA--EPKEWYANVQ 91 (399)
T ss_dssp HHSEE-CTT-----------HHHHHHHTSGGGGS-TTEETTEESSSSTHHHHHHHHHHHHHHHHHHT---STTTEEEE--
T ss_pred hcCccccCcc------cccCHHHHHHhCCcceeeccccCCCcccccCcchhhHHHHHHHHHHHHHhCC--CcccceEEee
Confidence 4567776665 345788888877766543222222 2223345555555555554553 333 2322
Q ss_pred eCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHH-----H-----HhCCCeEEEeeccCCCCCCCChhHHHhhcCC-Cc
Q 014936 106 TSGCTQAIDVAMALLSRPGANILLPRPGFPIYELS-----A-----AFRHIEVRHFDLLPDKGWEVDLDDIESLADQ-NT 174 (415)
Q Consensus 106 ~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~-----~-----~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~ 174 (415)
..+++.|+.+++.+|++|||+|+..++.+.++... . .....+...++++++ ...+|.+++++.++. ++
T Consensus 92 p~SGs~An~av~~aLl~pGD~Im~l~l~~GGHlshg~~~~~~~~~~~~~~~~~~~y~~d~~-~~~ID~d~l~~~a~~~kP 170 (399)
T PF00464_consen 92 PHSGSQANLAVYMALLKPGDTIMGLSLPHGGHLSHGSSVNFKKISASGLYFESVPYPVDPD-TGLIDYDELEKLAKEHKP 170 (399)
T ss_dssp -SSHHHHHHHHHHHHT-TT-EEEEEEGGGT--GGGT-TTSHSBSSHHHHHSEEEEEEB-TT-TSSB-HHHHHHHHHHH--
T ss_pred cCCchHHHHHHHHHHHhhcCcEEecChhhcccccccccccccccccccceEEEEeeeeecC-CCeECHHHHHHHHhhcCC
Confidence 45678899999999999999999988877654321 1 223457778888764 457999999987765 56
Q ss_pred eEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcc-cCCCCcccccccCCCCCeEEEccCccccCCCCce
Q 014936 175 VALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLV-FGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWR 253 (415)
Q Consensus 175 ~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~-~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r 253 (415)
++|++.....|. .-+.+++.++|++.|.+++.|-+|..+. .+|.-+.|+.. .+ |+.+|.+|+ ++|.|
T Consensus 171 klIi~G~S~y~~-----~~d~~~~reIad~vga~l~~D~sH~~GLIa~g~~~~P~~~--AD---vvt~sThKt--l~GPr 238 (399)
T PF00464_consen 171 KLIICGASSYPR-----PIDFKRFREIADEVGAYLMADISHIAGLIAGGLFPNPFPY--AD---VVTGSTHKT--LRGPR 238 (399)
T ss_dssp SEEEEE-SSTSS--------HHHHHHHHHHTT-EEEEE-TTTHHHHHTTSS--GCCT--SS---EEEEESSGG--G-SSS
T ss_pred CEEEECchhccC-----ccCHHHHHHHHHhcCcEEEecccccccceehheecCcccc--ce---EEEeecccc--ccccC
Confidence 666654333222 2457888888899999999999996544 44444445433 22 788899999 67888
Q ss_pred EEEEEeeC------CCCCCChHHHHHHHHhhcccc--CCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhc
Q 014936 254 LGWFVTTD------PCGMFRKPKVVERMKKYFDIL--GDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKE 325 (415)
Q Consensus 254 ~G~~~~~~------~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 325 (415)
-|.|.+++ ......++++.+++....... +++......+.+.++.+.....+++..+++.++.+.|.+.|.+
T Consensus 239 ggiI~~~~~~~~~~~~~~~~~~~l~~~I~~avfP~~qg~~h~~~iaalAval~ea~~~~fk~Ya~qVv~NAk~La~~L~~ 318 (399)
T PF00464_consen 239 GGIILTNKGSKNVDKKGKEIDEELAEKIDSAVFPGLQGGPHMHRIAALAVALKEALSPEFKEYAKQVVKNAKALAEALQE 318 (399)
T ss_dssp -EEEEES-SEEEE-TTS-EEEHHHHHHHHHHHTTTT-SS--HHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ceEEEEcCCccccCCcccccHHHHHHHhccccCCCcccCcchhHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHHHHHhh
Confidence 89999871 000000247888888764433 2333333344444444322345688999999999999999999
Q ss_pred CCCCcCCCCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCC-----CCCeEEEEee------CChhhH
Q 014936 326 IPCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVG-----LKNWLRVTFA------VDPYSL 394 (415)
Q Consensus 326 ~~~~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~-----~~~~iRi~~~------~~~~~l 394 (415)
. |+.++........+|+++.... .+...+...|++.||.+..-..++ ....|||+.. ..++++
T Consensus 319 ~-G~~v~~ggTd~H~vlvd~~~~~-----~~g~~a~~~Le~~gI~vnkn~iP~d~~~~~~sGlRlGT~~lT~rG~~e~dm 392 (399)
T PF00464_consen 319 R-GFKVVTGGTDNHQVLVDLRSFG-----IDGKEAEKALEEAGIIVNKNTIPGDRSPFVPSGLRLGTPALTRRGMKEEDM 392 (399)
T ss_dssp T-T-EEGGGS-SSSEEEEEGGGGT-----S-HHHHHHHHHHTTEE-EEE--TTTSTTTT-SEEEEESHHHHHTT--HHHH
T ss_pred C-CcEEEECCCCCCeEEEEecccc-----cchHHHHHHHHhcCeeecccccCCCCCCCCCCEEEECCHHHHhCCCCHHHH
Confidence 8 8885544556778888886421 133446677799999986432222 2578999982 345666
Q ss_pred HHHHHH
Q 014936 395 EECLDR 400 (415)
Q Consensus 395 ~~~l~~ 400 (415)
++..+.
T Consensus 393 ~~iA~~ 398 (399)
T PF00464_consen 393 KEIAEL 398 (399)
T ss_dssp HHHHHH
T ss_pred HHHHhh
Confidence 665543
No 338
>TIGR01366 serC_3 phosphoserine aminotransferase, putative. This model represents a putative variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in Mycobacterium tuberculosis and related high-GC Gram-positive bacteria.
Probab=99.76 E-value=1.7e-16 Score=147.83 Aligned_cols=313 Identities=16% Similarity=0.093 Sum_probs=191.1
Q ss_pred CCCcHHHHHHHHHHHhcCC-CCCCC--CCCCcHHHHHHHHHHHhhhCCCCCCC-CcEEEe-CChHHHHHHHHHHhcCCCC
Q 014936 51 FHTTHVATEAVAEALLSEK-FNGYA--PTAGLPLTRRAIAEYLSRDLPYKLTP-NDVFVT-SGCTQAIDVAMALLSRPGA 125 (415)
Q Consensus 51 ~~~~~~~~~a~~~~~~~~~-~~~y~--~~~g~~~lr~~ia~~~~~~~~~~~~~-~~i~i~-~g~~~al~~~~~~l~~~gd 125 (415)
...++++++++.+....-. ..... ...-+.+.|+.+++++ ++++ .+|+++ +|+|.++++++..+..+ +
T Consensus 12 ~~~~~~v~~a~~~~~~~~~~~~hr~~~f~~~~~~~r~~l~~l~------~~~~~~~v~f~~gs~T~a~~~~~~~l~~~-~ 84 (361)
T TIGR01366 12 SKVRLEQLQALTTTAASLFGTSHRQAPVKNLVGRVREGLAELF------SLPDGYEVILGNGGATAFWDAATFGLIEK-K 84 (361)
T ss_pred cCCCHHHHHHHHhcCccccccCcCChHHHHHHHHHHHHHHHHh------CCCCCceEEEECCchhHHHHHHHHhcccc-c
Confidence 4567888888764310000 00111 1234567788888887 3433 478876 55999999999998743 3
Q ss_pred EEEEcCCCCcc-hHHHHHhC--CCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHH
Q 014936 126 NILLPRPGFPI-YELSAAFR--HIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETA 202 (415)
Q Consensus 126 ~vi~~~p~y~~-~~~~~~~~--g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~ 202 (415)
.+++..-.|.. +.+.+... +.++..++.+. +..++ ..+.+++++|.+++.+|.||...|.+++ +
T Consensus 85 ~l~i~~G~~~~~~~~~a~~~~~~~~~~~~~~~~--~~~~~-----~~~~~~~~lV~~~h~et~tG~~~pi~~I------~ 151 (361)
T TIGR01366 85 SLHLSFGEFSSKFAKAVKLAPWLGEPIIVTADP--GSAPE-----PQADPGVDVIAWAHNETSTGVAVPVRRP------E 151 (361)
T ss_pred ccEEecCHHHHHHHHHHHhhhccCCceEEecCC--CCCCC-----CccCCCCCEEEEcccCCccceecccccc------c
Confidence 33444444542 33344431 23566665432 22222 2356789999999999999999876554 4
Q ss_pred hhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHHh-----
Q 014936 203 NKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKK----- 277 (415)
Q Consensus 203 ~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~----- 277 (415)
+++|+++++|.+++. +..+..+... + ++++|.+|+++.+|. ++.++.++ +.++++..
T Consensus 152 ~~~g~~~iVDavqs~----g~~~idv~~~--D---~~~~s~~K~lg~~~G-l~~~~~s~--------~~~~~~~~~~~~~ 213 (361)
T TIGR01366 152 GSDDALVVIDATSGA----GGLPVDIAET--D---VYYFAPQKNFASDGG-LWLAIMSP--------AALERIEAIAASG 213 (361)
T ss_pred ccCCCeEEEEcCccc----cCCCCCHHHC--C---EEEEEchhhcCCCCc-eEEEEECH--------HHHhhhhcccCCC
Confidence 789999999999998 3344444432 2 678899999988742 55545543 22222221
Q ss_pred ---------------h--ccccCCchhHHHHHHHHhhCCCcHH-HHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCC---
Q 014936 278 ---------------Y--FDILGDPATFIQAAVPSILQQPDEV-FFKKTLNLLKQSVDICYNKIKEIPCISCPHKPE--- 336 (415)
Q Consensus 278 ---------------~--~~~~~~~~~~~~~a~~~~l~~~~~~-~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~--- 336 (415)
. ....++++.....++.++++...+. .++...++.++..+++.+.+++++.+..+....
T Consensus 214 ~~~p~~~d~~~~~~~~~~~~t~~tp~i~~i~~l~~al~~l~~~gg~e~~~~r~~~l~~~l~~~l~~~~~~~~~~~~~~~~ 293 (361)
T TIGR01366 214 RWVPEFLSLPTAVDNSLKNQTYNTPAIATLALLAEQIDWMNGNGGLDWAVARTADSSSRLYSWAQERPYATPFVTDPGKR 293 (361)
T ss_pred CCCchhhhHHHHHhccccCCCCCCchHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhCCCcccCCCChhhc
Confidence 0 0112344444444555555543333 367778999999999999999886555331111
Q ss_pred CceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEee--CChhhHHHHHHHHHHHHHH
Q 014936 337 GSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFA--VDPYSLEECLDRIKSFYQR 407 (415)
Q Consensus 337 ~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~--~~~~~l~~~l~~l~~~~~~ 407 (415)
......+.++. + .+..++...+ +++||.+.++...-....+|+|+. ++.++++.+++.|++++++
T Consensus 294 s~~v~~v~~~~----g-~~~~~v~~~L-~~~gI~i~~~~~~l~~~~vRis~~~~~t~~di~~l~~al~~~~~~ 360 (361)
T TIGR01366 294 SQVVGTIDFVD----D-IDAATVAKIL-RANGIVDTEPYRKLGRNQLRVAMFPAIDPDDVEALTECVDWVVER 360 (361)
T ss_pred ccceEEEECCC----c-cCHHHHHHHH-HHCCCeeccCccccCCCcEEEEcCCCCCHHHHHHHHHHHHHHHhh
Confidence 11112223332 2 2556665665 667999977642222568999993 6899999999999998765
No 339
>COG0161 BioA Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [Coenzyme metabolism]
Probab=99.76 E-value=7.4e-16 Score=141.86 Aligned_cols=349 Identities=18% Similarity=0.149 Sum_probs=218.2
Q ss_pred cCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCC---CCCCCCCcHHHHHHHHHHHhhhCCCC-CCCCcEEEeCC
Q 014936 33 NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFN---GYAPTAGLPLTRRAIAEYLSRDLPYK-LTPNDVFVTSG 108 (415)
Q Consensus 33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~---~y~~~~g~~~lr~~ia~~~~~~~~~~-~~~~~i~i~~g 108 (415)
+|+.++|-.+|-=-... ---++++.+|+.+++..-.+. .+...+ -.+|-+.|++.. + -+-++|++++|
T Consensus 42 ~G~r~lDg~sg~W~~~~-Gh~~~~i~~Ai~~Q~~~l~~~~~~~~t~~P-a~~LA~~L~~~a------P~~~l~~vFf~~s 113 (449)
T COG0161 42 DGRRYLDGMSGLWCVNH-GHGRPEIAEAIKKQLDKLPHVMFGGFTHEP-AIELAEKLAELA------PEGGLDHVFFTDS 113 (449)
T ss_pred CCCEEEecccHHHHhhc-CcCCHHHHHHHHHHHHhCCchhhcccCCch-HHHHHHHHHHhC------CCCCccEEEEeCC
Confidence 46677776555300000 113688999999988753221 111211 355666666655 2 23579999999
Q ss_pred hHHHHHHHHHHhc-------CCC-CEEEEcCCCCcchHHHHHhCCC--------------eEEEeeccCC------CCCC
Q 014936 109 CTQAIDVAMALLS-------RPG-ANILLPRPGFPIYELSAAFRHI--------------EVRHFDLLPD------KGWE 160 (415)
Q Consensus 109 ~~~al~~~~~~l~-------~~g-d~vi~~~p~y~~~~~~~~~~g~--------------~~~~~~~~~~------~~~~ 160 (415)
||+|++++++... +|. .++|.-..+|++-.-.+...|. .+..++.... +.+.
T Consensus 114 GSeAvEtAlKma~qY~~~~G~p~r~~~Isr~~gYHG~T~ga~Sv~g~~~~~~~~~~~ll~~~~~~~~P~~y~~~~~~~~~ 193 (449)
T COG0161 114 GSEAVETALKMALQYWRARGQPQRKKFISRRNGYHGDTLGAMSVGGPVALRHAFYDPLLPEVLHLPAPYAYRRGFFGEGD 193 (449)
T ss_pred chHHHHHHHHHHHHHHHhcCCCcceEEEEeccCcCcccchheeccCchhhhhhhccccccCceecCCCcccccCCCCCCh
Confidence 9999999999864 233 2488888899864333322221 1112222110 1111
Q ss_pred ----CChhHHHhhcCC---CceEEEecCC--CCccccC-CCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccc
Q 014936 161 ----VDLDDIESLADQ---NTVALVIINP--GNPCGNV-YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGV 230 (415)
Q Consensus 161 ----~~~~~l~~~~~~---~~~~v~i~~p--~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~ 230 (415)
-..++|++.+.. .+.+.+|..| ...+|+. +|+.-++++.++|++||+++|.||+-.+|...|..+.. ..
T Consensus 194 ~~~~~~a~~le~~i~~~g~~~IAAfI~EPv~g~agG~~~pp~~Yl~~vr~iC~ky~ILlI~DEV~tGFGRTG~~FA~-e~ 272 (449)
T COG0161 194 EEFAEAADELEALILEHGPETIAAFIVEPVVGGAGGMLVPPPGYLKRVREICDKYGILLIADEVATGFGRTGKMFAC-EH 272 (449)
T ss_pred HHHHHHHHHHHHHHHhcCcccEEEEEecccccccCCcccCChHHHHHHHHHHHHcCcEEEeecceeCCCcCchhhhh-hh
Confidence 124556666643 5677888888 3447765 67778999999999999999999999998888765432 22
Q ss_pred cCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhh------ccccCCchhHHHHHHHHhhCCCcHHH
Q 014936 231 FGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKY------FDILGDPATFIQAAVPSILQQPDEVF 304 (415)
Q Consensus 231 ~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~a~~~~l~~~~~~~ 304 (415)
.+..+.++ +++|.+..+-+++|.+++++ ++.+.+... ..++++.+|++.+++.+-|+-..+
T Consensus 273 ~gi~PDi~---~~aKGLT~GY~Pl~a~l~~~--------~I~~~~~~~~~~~f~HG~TYsghPlacAaAla~L~i~e~-- 339 (449)
T COG0161 273 AGIVPDIL---CLAKGLTGGYLPLSAVLTSD--------RIYEAFSDGDAGAFMHGHTYSGNPLACAAALANLDILEE-- 339 (449)
T ss_pred cCCCCCee---eecccccccchhhHhHhhhH--------HHHHHHhcccCCeeccCCccccCHHHHHHHHHHHHHHHh--
Confidence 22222333 56899877778999988866 677777653 124578899999988888765321
Q ss_pred HHHHHHHHHHHHHHHHHHhhc-C---CCCcCCCCCCCceEEEEecCccccCCC---CCHHHHHHHHHhhcCeEEEcCCCC
Q 014936 305 FKKTLNLLKQSVDICYNKIKE-I---PCISCPHKPEGSMAVMLKLNLSLLDDI---IDDIDFCFKLAKEESVIILPGTAV 377 (415)
Q Consensus 305 ~~~~~~~~~~~~~~l~~~l~~-~---~~~~~~~~p~~g~~~~~~l~~~~~~~~---~~~~~~~~~ll~~~gi~v~~g~~~ 377 (415)
+.+.++.++.-.++.+.|+. + |.+. - ...-|++.-+++...+-... ......+...+.++|+.++|..
T Consensus 340 -e~l~~~~~~~~~~l~~~L~~~l~~~p~Vg-d-VR~~Gli~~iElv~d~~t~~~f~~~~~~~~~~~~~e~Gl~iRp~g-- 414 (449)
T COG0161 340 -EDLLERVAEIGAYLQAGLQAALADHPLVG-D-VRGLGLIGAIELVADKATKTPFEARVGARVRAAALERGLLIRPLG-- 414 (449)
T ss_pred -cCHHHHHHHHHHHHHHHHHHhcccCCcEE-E-eeccceEEEEEEecccccccchhhhHHHHHHHHHHHCCeEEeecC--
Confidence 23445555555556666654 3 3333 1 34567777777644221100 0123344555567899999973
Q ss_pred CCCCeEEEEe--eCChhhHHHHHHHHHHHHHHHHHH
Q 014936 378 GLKNWLRVTF--AVDPYSLEECLDRIKSFYQRHAKQ 411 (415)
Q Consensus 378 ~~~~~iRi~~--~~~~~~l~~~l~~l~~~~~~~~~~ 411 (415)
..+=++. ..++++++++++++.+++++..+.
T Consensus 415 ---~~i~~~PPliit~~eid~l~~~l~~al~~~~~~ 447 (449)
T COG0161 415 ---DVIYLMPPLIITREEIDELVDALREALDETLAD 447 (449)
T ss_pred ---CEEEEcCCccCCHHHHHHHHHHHHHHHHHHHhc
Confidence 3445554 579999999999999999876553
No 340
>KOG2862 consensus Alanine-glyoxylate aminotransferase AGT1 [General function prediction only]
Probab=99.75 E-value=3.1e-15 Score=127.87 Aligned_cols=279 Identities=17% Similarity=0.152 Sum_probs=196.2
Q ss_pred CcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcc--hHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCC-CceEE
Q 014936 101 NDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPI--YELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ-NTVAL 177 (415)
Q Consensus 101 ~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~--~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~v 177 (415)
.-+++..+|+.+++.++-.++.|||+|++..-+-.+ ..++++.+|++|..++.+. +....++.+.+.+.. +++++
T Consensus 69 ~tf~isgsGh~g~E~al~N~lePgd~vLv~~~G~wg~ra~D~~~r~ga~V~~v~~~~--G~~~~le~i~~~lsqh~p~~v 146 (385)
T KOG2862|consen 69 QTFVISGSGHSGWEAALVNLLEPGDNVLVVSTGTWGQRAADCARRYGAEVDVVEADI--GQAVPLEEITEKLSQHKPKAV 146 (385)
T ss_pred ceEEEecCCcchHHHHHHhhcCCCCeEEEEEechHHHHHHHHHHhhCceeeEEecCc--ccCccHHHHHHHHHhcCCceE
Confidence 455667778999999999999999999877655443 5678899999999997653 456899999998876 47889
Q ss_pred EecCCCCccccCCCHHH-HHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCC-CceEE
Q 014936 178 VIINPGNPCGNVYSYQH-LQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVP-GWRLG 255 (415)
Q Consensus 178 ~i~~p~nptG~~~~~~~-l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~-G~r~G 255 (415)
++++....||+. .+ +..+-++|++|+.++++|.+-+... ....+..++-+ +.+.+ -.|++++| | ++
T Consensus 147 fv~hgdsSTgV~---q~~~~~~g~lc~k~~~lllVD~VaSlgg----t~F~mDewgVD--vaytg-SQKaL~aP~G--Ls 214 (385)
T KOG2862|consen 147 FVTHGDSSTGVL---QDLLAISGELCHKHEALLLVDTVASLGG----TEFEMDEWGVD--VAYTG-SQKALGAPAG--LS 214 (385)
T ss_pred EEEecCcccccc---chHHHHHHHHhhcCCeEEEEechhhcCC----ccceehhhccc--EEEec-chhhcCCCCC--cc
Confidence 999999999999 55 6667788999999999999988622 22233444433 44444 47998764 5 33
Q ss_pred EEEeeCCCCCCChHHHHHHHHhhcc------------------------ccCCchhHHHHHHHHhhCCCcHHHHHHHHHH
Q 014936 256 WFVTTDPCGMFRKPKVVERMKKYFD------------------------ILGDPATFIQAAVPSILQQPDEVFFKKTLNL 311 (415)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~------------------------~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~ 311 (415)
-+..++ ....+++..+. +..+++....+.+.++|....++.+++..++
T Consensus 215 iisfS~--------ka~~~~~~rK~~~~~~yFd~~~~~~~wgc~~e~~~yhhT~pv~lly~Lr~AL~~I~eeGL~~~~~r 286 (385)
T KOG2862|consen 215 IISFSD--------KALEAIRDRKTKPVSFYFDILRLGNFWGCDGEPRAYHHTPPVQLLYSLRAALALIAEEGLENSWRR 286 (385)
T ss_pred eeecCH--------HHHHHHhhccCCceEEEEeHHhhcchhccCCcccccccCCcHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344433 23333333211 1234555556666666665556889999999
Q ss_pred HHHHHHHHHHHhhcCCCCcCCCCCCC---ceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEe-
Q 014936 312 LKQSVDICYNKIKEIPCISCPHKPEG---SMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTF- 387 (415)
Q Consensus 312 ~~~~~~~l~~~l~~~~~~~~~~~p~~---g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~- 387 (415)
.++..+.+...|+++ |++.....+. .-...+..+.. .|-.+.+..+..++++.+..|-.......+||.+
T Consensus 287 H~e~s~~l~~~l~~~-GLq~fv~~e~~rlptvttv~vp~g-----vDw~dVv~~~~~~~~vei~gglg~~~gKv~RIGl~ 360 (385)
T KOG2862|consen 287 HREMSKWLKLSLEAL-GLQLFVVDEELRLPTVTTVKVPYG-----VDWKDVVAYAMSHYVVEIGGGLGPTVGKVFRIGLL 360 (385)
T ss_pred HHHHHHHHHHHHHHh-CccceecChhhccCcceeeecCCC-----CCHHHHHHHHHHhcCEEeccccCCCcccEEEEEEe
Confidence 999999999999987 5553222111 11222333332 3677888888777788887766666678999999
Q ss_pred e--CChhhHHHHHHHHHHHHHH
Q 014936 388 A--VDPYSLEECLDRIKSFYQR 407 (415)
Q Consensus 388 ~--~~~~~l~~~l~~l~~~~~~ 407 (415)
+ .+-|.++..++.|+..+++
T Consensus 361 gcna~~e~i~~v~~ll~~alq~ 382 (385)
T KOG2862|consen 361 GCNANVEYIDNVVELLKLALQR 382 (385)
T ss_pred eccCCcHHHHHHHHHHHHHHhh
Confidence 4 3568999999998888765
No 341
>KOG1402 consensus Ornithine aminotransferase [Amino acid transport and metabolism]
Probab=99.75 E-value=1.9e-16 Score=136.12 Aligned_cols=339 Identities=19% Similarity=0.166 Sum_probs=220.3
Q ss_pred CcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCC---CCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChH
Q 014936 34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKF---NGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCT 110 (415)
Q Consensus 34 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~---~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~ 110 (415)
|+.++||=.+...... --.+|.+.+++++..+.-.+ ..|.+ -..++.+.+++++ .-+.++-++.|.
T Consensus 58 Gk~ylDflsaysaVnq-Ghchpki~~aLqeq~~kLtlssrafYnd--~~~~f~~~vt~lf--------~~~kvlpmnTGa 126 (427)
T KOG1402|consen 58 GKEYLDFLSAYSAVNQ-GHCHPKIIKALQEQADKLTLSSRAFYND--VLGEFAEYVTKLF--------GYDKVLPMNTGA 126 (427)
T ss_pred ccchhhhhhhhhhccc-CCCCHHHHHHHHHHHhHhhhhhHHHhhh--hHHHHHHHHHHhc--------Ccceeeecccch
Confidence 5566666555432222 23578999999988764221 23443 2356777777776 467888899999
Q ss_pred HHHHHHHHHhcC--------C-C-CEEEEcCCCCcchHHHHHhCCCeEEEee----ccCCCC---CCCChhHHHhhcCCC
Q 014936 111 QAIDVAMALLSR--------P-G-ANILLPRPGFPIYELSAAFRHIEVRHFD----LLPDKG---WEVDLDDIESLADQN 173 (415)
Q Consensus 111 ~al~~~~~~l~~--------~-g-d~vi~~~p~y~~~~~~~~~~g~~~~~~~----~~~~~~---~~~~~~~l~~~~~~~ 173 (415)
+|.+.++....+ | . ..|+....+|++-.-.+...+.+...+. .-|... ---|.++|+..++..
T Consensus 127 Ea~Eta~KLaR~wgy~~K~ip~nka~il~~~~nFhGrT~~ais~s~d~ds~~~fgp~~P~~~~~v~Y~d~eale~~l~~~ 206 (427)
T KOG1402|consen 127 EAVETACKLARKWGYRKKNIPKNKAKILSAENNFHGRTLGAISLSTDPDSWDGFGPFLPGVVDKVPYGDAEALEVALKSP 206 (427)
T ss_pred hHHHHHHHHHHHHHHhhccCCccceeEEEecccccCceeeeEEecCCcchhhccCCCCCCcceeeccCCHHHHHHHhcCC
Confidence 999999988652 2 1 2344445555543222222222221100 000000 012799999999887
Q ss_pred ceEEEecCC-CCccccC-CCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcc-cccccCCCCCeEEEccCccccCCC
Q 014936 174 TVALVIINP-GNPCGNV-YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFV-PMGVFGSTVPILTLGSLSKRWIVP 250 (415)
Q Consensus 174 ~~~v~i~~p-~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~-~~~~~~~~~~~i~~~s~sK~~~~~ 250 (415)
..+-+++.| +...|++ .|..-+++..++|.+||+++|.||++.++..+|+-.. ......+ .+|. +.|+++.+
T Consensus 207 ~vaaFivEPIQGEaGVvvP~~GYL~~vreLCtkynvl~I~DEvQTGl~RTGk~la~d~env~P--Divi---lgKalSGG 281 (427)
T KOG1402|consen 207 NVAAFIVEPIQGEAGVVVPPPGYLKKVRELCTKYNVLLIADEVQTGLARTGKLLACDYENVRP--DIVI---LGKALSGG 281 (427)
T ss_pred CeeEEEeeccccccceEeCCchhHHHHHHHHHhhcEEEEehhhhhcccccCcEEEeehhhcCC--CeEE---EeccccCC
Confidence 777888999 7778876 5667799999999999999999999999887775321 1112222 2333 56997655
Q ss_pred CceEEEEEeeCCCCCCChHHHHHHHHhhc-cccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCC--
Q 014936 251 GWRLGWFVTTDPCGMFRKPKVVERMKKYF-DILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIP-- 327 (415)
Q Consensus 251 G~r~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~-- 327 (415)
=++++.+++.+ +++-.++... ..+++.||++.+++.++|+... -+++.++.++.-+.+..+|++++
T Consensus 282 ~~Pvsavl~~~--------~im~~~~pgeHgsTyggNpLg~~vaiAalevi~---eekL~era~~lG~~l~~~L~~l~~~ 350 (427)
T KOG1402|consen 282 VYPVSAVLADD--------DIMLNIKPGEHGSTYGGNPLGCAVAIAALEVIV---EEKLVERAAKLGEILRDQLNKLQKK 350 (427)
T ss_pred eeeeEEEEecH--------HHHhccCCCccccccCCChHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHhcccc
Confidence 57899999866 5666665543 2457789999999988887532 34556666777777788887763
Q ss_pred --CCcCCCCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEe--eCChhhHHHHHHHHHH
Q 014936 328 --CISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTF--AVDPYSLEECLDRIKS 403 (415)
Q Consensus 328 --~~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~--~~~~~~l~~~l~~l~~ 403 (415)
.+- .....-|++.-+.+...+..+. +.-+.+.. +++.|+..-|-. .+.||++. ..+++++++.++.|.+
T Consensus 351 ~p~~v-~~VRGrGl~~ai~i~~~~~~~~-~aw~~cl~-lk~~g~LAkptH----~~IiRfaPPL~I~e~dl~eg~e~i~k 423 (427)
T KOG1402|consen 351 FPHVV-KEVRGRGLLNAIVINPSKTSGQ-DAWDVCLA-LKENGLLAKPTH----GNIIRFAPPLVISEEDLREGIEAIEK 423 (427)
T ss_pred ccchh-heeeccceEEEEEeccccccch-hHHHHHHc-ccccccccCCCC----CCeEEecCCcccCHHHHHHHHHHHHH
Confidence 222 2245568888777764433222 44455554 477888877654 46899998 5799999999999988
Q ss_pred HHH
Q 014936 404 FYQ 406 (415)
Q Consensus 404 ~~~ 406 (415)
.+.
T Consensus 424 ~i~ 426 (427)
T KOG1402|consen 424 TIA 426 (427)
T ss_pred Hhc
Confidence 763
No 342
>PRK08297 L-lysine aminotransferase; Provisional
Probab=99.74 E-value=3.3e-15 Score=142.52 Aligned_cols=343 Identities=14% Similarity=0.149 Sum_probs=194.0
Q ss_pred cCcceeEecccCCCCCCCCCCcHHHHH--HHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChH
Q 014936 33 NEKKVISLAMGDPTVHSCFHTTHVATE--AVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCT 110 (415)
Q Consensus 33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~--a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~ 110 (415)
+|+.++|+..|.-.... --.+|.+.+ ++++++..-.+..........+....+++.+.+..+ +-..+.++++++|+
T Consensus 43 dG~~ylD~~~g~~~~~l-Gh~~p~v~~~~ai~~ql~~l~~~~~~~~~~~~~~~~~la~~l~~~~~-p~~~~~v~f~~SGs 120 (443)
T PRK08297 43 TGRRYLDMFTFFASSAL-GMNHPALADDPEFRAELGRAALNKPSNSDVYTVEMARFVDTFARVLG-DPELPHLFFVDGGA 120 (443)
T ss_pred CCCEeeecccCHhhhcC-CCCChHHhhHHHHHHHHHHhhhhccccCCcCCHHHHHHHHHHHhhcC-CCCCCEEEEeCchH
Confidence 47888898777422111 124688988 888887642110000000011233334444432211 11346999999999
Q ss_pred HHHHHHHHHhc--------CCC------CEEEEcCCCCcchHHHHHhCCC-eE-E----------EeeccCC----CCCC
Q 014936 111 QAIDVAMALLS--------RPG------ANILLPRPGFPIYELSAAFRHI-EV-R----------HFDLLPD----KGWE 160 (415)
Q Consensus 111 ~al~~~~~~l~--------~~g------d~vi~~~p~y~~~~~~~~~~g~-~~-~----------~~~~~~~----~~~~ 160 (415)
+|++.+++... ..| .+|+....+|++....+..... .. . .++.... .+..
T Consensus 121 EAve~AlKlAr~~~~~~~~~~g~~~~~r~kii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (443)
T PRK08297 121 LAVENALKVAFDWKSRKNEARGIDPALGTKVLHLRGAFHGRSGYTLSLTNTDPRKTARFPKFDWPRIDNPKLRFPLPGED 200 (443)
T ss_pred HHHHHHHHHHHHHhhccccccCCCCCCCceEEEECCCcCCcchhhhhhcCCcccccccCCCCCccccCCCCCCCCCcccc
Confidence 99999999873 112 5799999999987665543321 10 0 0100000 0000
Q ss_pred ---C------ChhHHHhhcCC--CceEEEecCC-CCcccc-CCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCccc
Q 014936 161 ---V------DLDDIESLADQ--NTVALVIINP-GNPCGN-VYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVP 227 (415)
Q Consensus 161 ---~------~~~~l~~~~~~--~~~~v~i~~p-~nptG~-~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~ 227 (415)
. +++.+++.+.. ...+.++..| ....|. ..|.+.+++|.++|++||+++|.||++.++...|....
T Consensus 201 ~~~~~~~~~~~~~~~~~~i~~~~~~iAavI~EPi~g~~G~~~pp~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~a- 279 (443)
T PRK08297 201 LEEVEALEAEALAQARAAFERHPHDIACFIAEPIQGEGGDNHFRPEFFAAMRELCDEHDALLIFDEVQTGVGLTGTAWA- 279 (443)
T ss_pred cchhhHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhccCccchHHH-
Confidence 0 23445555542 3455666777 444565 47889999999999999999999999998765554221
Q ss_pred ccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHHH----HH--hhccccCCchhHHHHHHHHhhCCCc
Q 014936 228 MGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVER----MK--KYFDILGDPATFIQAAVPSILQQPD 301 (415)
Q Consensus 228 ~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~----~~--~~~~~~~~~~~~~~~a~~~~l~~~~ 301 (415)
...++..+.++ +++|.++ +|.+++.+ ++.+. +. .....+++.++++..++.+.|+...
T Consensus 280 ~~~~gv~PDiv---~~gK~l~-----~~a~l~~~--------~i~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l~ 343 (443)
T PRK08297 280 YQQLGVRPDIV---AFGKKTQ-----VCGIMAGR--------RVDEVEDNVFAVSSRINSTWGGNLVDMVRARRILEVIE 343 (443)
T ss_pred HHhcCCCCCEE---Eeccccc-----ccceecch--------HHHHhhhhhccCccccCCCCCccHHHHHHHHHHHHHHH
Confidence 12222222333 5789853 23344432 22211 11 1122355678889888888886432
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhh----cCCCCcCCCCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCC
Q 014936 302 EVFFKKTLNLLKQSVDICYNKIK----EIPCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAV 377 (415)
Q Consensus 302 ~~~~~~~~~~~~~~~~~l~~~l~----~~~~~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~ 377 (415)
++ +..++.++.-+++.+.|+ +.|.+. ......|.++.+.++.. .....+...+ .++||.+.|+.
T Consensus 344 ~~---~l~~~~~~~g~~l~~~L~~l~~~~~~~~-~~vrg~G~~~~i~~~~~-----~~~~~~~~~l-~~~Gvl~~~~~-- 411 (443)
T PRK08297 344 ED---GLVENAARQGEYLLARLEELAAEFPAVV-SNVRGRGLMCAFDLPTT-----ADRDEVIRRL-WEEGVLVLPCG-- 411 (443)
T ss_pred hc---CHHHHHHHHHHHHHHHHHHHHHHCCCcc-eeeeccceEEEEEecCH-----HHHHHHHHHH-HHCCEEEecCC--
Confidence 11 233344444444444443 344332 11234477777777531 1133555555 46799998753
Q ss_pred CCCCeEEEEe--eCChhhHHHHHHHHHHHHHHH
Q 014936 378 GLKNWLRVTF--AVDPYSLEECLDRIKSFYQRH 408 (415)
Q Consensus 378 ~~~~~iRi~~--~~~~~~l~~~l~~l~~~~~~~ 408 (415)
...+|+++ .++++++++++++|.++++++
T Consensus 412 --~~~lr~~P~l~~t~~eid~~l~~l~~~l~~~ 442 (443)
T PRK08297 412 --ERSIRFRPALTVTTEEIDAAIDALRRALPEV 442 (443)
T ss_pred --CCeEEEECCccCCHHHHHHHHHHHHHHHHhh
Confidence 25688866 578999999999999988754
No 343
>PRK06209 glutamate-1-semialdehyde 2,1-aminomutase; Provisional
Probab=99.74 E-value=1.9e-15 Score=144.09 Aligned_cols=332 Identities=16% Similarity=0.119 Sum_probs=187.0
Q ss_pred ccCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCC-CCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChH
Q 014936 32 KNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPT-AGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCT 110 (415)
Q Consensus 32 ~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~-~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~ 110 (415)
.+++.++|+..|.-.... --.+|.+.+++++++..... +..+ ....++.+.+++.+ + ..+.++++++|+
T Consensus 45 ~dG~~ylD~~~g~~~~~l-Gh~~p~v~~Ai~~q~~~~~~--~~~~~~~~~~la~~l~~~~----p---~~~~v~f~~sGs 114 (431)
T PRK06209 45 VDGNEYIEYGMGLRAVGL-GHAYPPVVEAVREALQDGCN--FTRPSAIELDAAESFLELI----D---GADMVKFCKNGS 114 (431)
T ss_pred CCCCEEEEccccccchhc-CCCCHHHHHHHHHHHHhCcC--CCCCCHHHHHHHHHHHHhC----C---ccceEEEecCHH
Confidence 358889999877532221 12478999999999886432 3221 11123455555543 1 136899999999
Q ss_pred HHHHHHHHHhc-CCC-CEEEEc-CCCCcchHHHHH-----hCCCe------EEEeeccCCCCCCCChhHHHhhcCC--Cc
Q 014936 111 QAIDVAMALLS-RPG-ANILLP-RPGFPIYELSAA-----FRHIE------VRHFDLLPDKGWEVDLDDIESLADQ--NT 174 (415)
Q Consensus 111 ~al~~~~~~l~-~~g-d~vi~~-~p~y~~~~~~~~-----~~g~~------~~~~~~~~~~~~~~~~~~l~~~~~~--~~ 174 (415)
+|++.+++... -.| ..|+.. .-+|++...... ..|.. +..++ -.|++++++.++. ..
T Consensus 115 eA~e~AlklAr~~tgr~~i~~~~~~~~h~~~~~~~g~~~~~~~~~~~~~~~~~~~~-------~~d~~~l~~~l~~~~~~ 187 (431)
T PRK06209 115 DATSAAVRLARAYTGRDLVARCADHPFFSTDDWFIGTTPMSAGIPASVSALTVTFR-------YNDIASLEALFEDHPGR 187 (431)
T ss_pred HHHHHHHHHHHHHhCCCeEEEeccCccccccccccccCCCCCCCChhHhccccccC-------CCCHHHHHHHHHhCCCC
Confidence 99999999754 123 345554 233332211110 00110 11111 1278888887753 34
Q ss_pred eEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceE
Q 014936 175 VALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRL 254 (415)
Q Consensus 175 ~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~ 254 (415)
.+.+++.|- .|...+.+.+++|.++|++||+++|+||++.++...+..... .++..+. +.+++|.++ .|+.+
T Consensus 188 ~aavi~Epv--~g~~~~~~~l~~l~~lc~~~g~lLI~DEv~tG~~~~~~g~~~--~~gv~PD---i~t~gK~lg-gG~p~ 259 (431)
T PRK06209 188 IACVILEPA--TADEPQDGFLHEVRRLCHENGALFILDEMITGFRWHMRGAQK--LYGIVPD---LSCFGKALG-NGFAV 259 (431)
T ss_pred EEEEEEccc--cCCCCCHHHHHHHHHHHHHcCCEEEEEcccccCCcCcchhhH--HhCCCcc---eeeehhhhc-CCccc
Confidence 556677774 344778899999999999999999999999776433211111 1222222 357899965 56889
Q ss_pred EEEEeeCCCCCCChHHHHHH--HHh---h----ccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhh-
Q 014936 255 GWFVTTDPCGMFRKPKVVER--MKK---Y----FDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIK- 324 (415)
Q Consensus 255 G~~~~~~~~~~~~~~~~~~~--~~~---~----~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~- 324 (415)
|++++++ ++.+. +.. . ...+.+++++..+++.+.|+...++ ...++++++.+++.+.|+
T Consensus 260 ~av~~~~--------~i~~~~~~~~~~~~~~~~~~~T~~~np~~~aaa~a~l~~i~~~---~~~~~~~~~g~~l~~~L~~ 328 (431)
T PRK06209 260 SALAGKR--------EYMELGGLEHTDRERVFLLSTTHGAETHALAAAIATMAIYRDE---DVIERLHEQGAKLAAGVNE 328 (431)
T ss_pred EEEEEHH--------HHHhhhcccccCCCCceeeccCCCCCHHHHHHHHHHHHHHhcc---CHHHHHHHHHHHHHHHHHH
Confidence 9999865 56554 211 0 1224456778888777777643221 233444444444444443
Q ss_pred ---cCCCCcCCCCCCCceEEEEecCccccCCCCCH---HHHHHHHHhhcCeEEEcCCCCCCCCeEEEEeeCChhhHHHHH
Q 014936 325 ---EIPCISCPHKPEGSMAVMLKLNLSLLDDIIDD---IDFCFKLAKEESVIILPGTAVGLKNWLRVTFAVDPYSLEECL 398 (415)
Q Consensus 325 ---~~~~~~~~~~p~~g~~~~~~l~~~~~~~~~~~---~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~~~l~~~l 398 (415)
+++ +.......+..+.+..+.... .+.... ..+...+ .++||.+. .++++..++++++++++
T Consensus 329 ~~~~~~-~~~~vr~~G~~~~~~~~~~~~-~~~~~~~~~~~~~~~l-~~~Gi~~p---------~l~is~~ht~~dId~~l 396 (431)
T PRK06209 329 AAAEHG-LQDHVRVSGRPCCLTYSTLDG-NGQPSQAFRTLFLQET-IRRGVLMP---------SLVVSYAHGDADIERTI 396 (431)
T ss_pred HHHhCC-CCeEEEeecceEEEEEecCCc-ccCCcHHHHHHHHHHH-HHCCcccc---------cccccccCCHHHHHHHH
Confidence 342 221111122222211111100 000111 1344454 56699762 25677678999999999
Q ss_pred HHHHHHHHHHHHH
Q 014936 399 DRIKSFYQRHAKQ 411 (415)
Q Consensus 399 ~~l~~~~~~~~~~ 411 (415)
++|.+++.+.++.
T Consensus 397 ~~l~~~l~~~~~~ 409 (431)
T PRK06209 397 DAVHGALGVYRKA 409 (431)
T ss_pred HHHHHHHHHHHHH
Confidence 9999999987543
No 344
>PLN02263 serine decarboxylase
Probab=99.74 E-value=2.6e-14 Score=134.10 Aligned_cols=296 Identities=14% Similarity=0.035 Sum_probs=202.0
Q ss_pred CcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcC--CCCEEEEcCCCCcchHHHHHhCCCeEEEeeccC
Q 014936 78 GLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSR--PGANILLPRPGFPIYELSAAFRHIEVRHFDLLP 155 (415)
Q Consensus 78 g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~--~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~ 155 (415)
+..++++.+-+|+.+.+|.+-+.-.-++|+|||+++..++.+..+ +...+++++.+|+++.+.++..|++++.+|++
T Consensus 130 ~s~~~E~~Vi~wla~L~g~p~~~~~G~vtsGGTEaNL~Al~aARe~~~~~vvy~S~~aH~Sv~KAa~llgi~~~~Vp~d- 208 (470)
T PLN02263 130 HSRQFEVGVLDWFARLWEIEKNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDTL- 208 (470)
T ss_pred hHHHHHHHHHHHHHHHhCCCCCCCeEEEeCcHHHHHHHHHHHHHhhcCCcEEEEcCCccHHHHHHHHhcCCcceEeccC-
Confidence 568999999999998888542222358899999999998888754 23478899999999999999999999999985
Q ss_pred CCCCCCChhHHHhhcCCC---ceEEEecCCCCccccCCCHHHHHHHHHHHhhcCc-----EEEEccccCCcccCCCCccc
Q 014936 156 DKGWEVDLDDIESLADQN---TVALVIINPGNPCGNVYSYQHLQKLAETANKLKT-----LVIADEVYGHLVFGDKPFVP 227 (415)
Q Consensus 156 ~~~~~~~~~~l~~~~~~~---~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~-----~li~De~~~~~~~~~~~~~~ 227 (415)
.++.+|+++|++++.++ +.+|+.+-++.++|.+ +++.+|+++|+++|+ |+++|.+|+++...-....+
T Consensus 209 -~~g~mD~~aL~~aI~~d~~~P~iVvataGTT~~GAi---Dpi~eIa~i~~~~g~~~~~iwlHVDAA~GG~~lPf~~~~~ 284 (470)
T PLN02263 209 -VSGEIDCADFKAKLLANKDKPAIINVNIGTTVKGAV---DDLDLVIKTLEECGFSQDRFYIHCDGALFGLMMPFVKRAP 284 (470)
T ss_pred -CCCcCcHHHHHHHHHhCCCCcEEEEEEecCCCCcCC---CCHHHHHHHHHHcCCccCCeeEEEeccchhhHhhhccccc
Confidence 45679999999988654 3445566678899999 999999999999997 99999999887642111111
Q ss_pred ccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhh------cccc--CCchhHHHHHHHHhhCC
Q 014936 228 MGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKY------FDIL--GDPATFIQAAVPSILQQ 299 (415)
Q Consensus 228 ~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~------~~~~--~~~~~~~~~a~~~~l~~ 299 (415)
...+.....-| ..+.+|+ +...+..|.++.++. ..+.+... ...+ ++-+......+...|..
T Consensus 285 ~~df~~~vDSI-svD~HK~-l~~P~~cgvll~R~~--------~~~~~~~~~~Yl~~~d~ti~gSR~g~~al~lW~~L~~ 354 (470)
T PLN02263 285 KVTFKKPIGSV-SVSGHKF-VGCPMPCGVQITRME--------HINVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNR 354 (470)
T ss_pred ccCCCcCccEE-EECCccc-cCCCcCEEEEEEehh--------hHhhhccChHhhCCCCCCcCCCCCcHHHHHHHHHHHH
Confidence 11111111224 4478998 667778999998752 22222110 0011 11111122333444555
Q ss_pred CcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCC
Q 014936 300 PDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGL 379 (415)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~ 379 (415)
...+.+.++.++..++++++.+.|++. ++..+..|... .+.++-+ .+.. ...|..+.+-
T Consensus 355 ~G~~G~~~~i~~~~~~A~~l~~~l~~~-g~~~~~~p~s~-~V~f~~p--------~~~~------~~~gW~L~~~----- 413 (470)
T PLN02263 355 KGYRGFQKEVQKCLRNAHYLKDRLREA-GISAMLNELSS-TVVFERP--------KDEE------FVRRWQLACQ----- 413 (470)
T ss_pred hCHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEEeCCCce-EEEEecC--------chHH------hhcceEEccC-----
Confidence 556889999999999999999999988 66645556544 3333322 1111 1236665542
Q ss_pred CCeEEEEee--CChhhHHHHHHHHHHHHHHHH
Q 014936 380 KNWLRVTFA--VDPYSLEECLDRIKSFYQRHA 409 (415)
Q Consensus 380 ~~~iRi~~~--~~~~~l~~~l~~l~~~~~~~~ 409 (415)
+..+++++. .+.+.++++++.|++..+.+.
T Consensus 414 ~~~~Hivvmphv~~~~id~fi~DL~~~~~~~~ 445 (470)
T PLN02263 414 GNIAHVVVMPSVTIEKLDYFLKELVEKRSTWY 445 (470)
T ss_pred CCcEEEEEcCCCCHHHHHHHHHHHHHHHhhhh
Confidence 356899883 578999999999988877543
No 345
>PRK05367 glycine dehydrogenase; Provisional
Probab=99.73 E-value=9.8e-15 Score=149.17 Aligned_cols=342 Identities=15% Similarity=0.109 Sum_probs=208.1
Q ss_pred CcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCC------CCcHHHHHHHHHHHhhhCCCCCCCCcEEEeC
Q 014936 34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPT------AGLPLTRRAIAEYLSRDLPYKLTPNDVFVTS 107 (415)
Q Consensus 34 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~------~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~ 107 (415)
...+|-+++.. ....+.+...+.. ...+..|.|. .|..++...+.+++.+..|. +++-+..
T Consensus 498 ~~~~i~lGsct------~~~~p~~~~~~~~---~~~f~~~hP~qp~e~~qG~l~~i~e~q~~l~eltG~----d~~sl~~ 564 (954)
T PRK05367 498 DRSMIPLGSCT------MKLNAAAEMIPIT---WPEFANLHPFAPAEQAAGYRELIDQLEAWLAEITGY----DAVSLQP 564 (954)
T ss_pred ccceeeCCcCC------CcCCHHHHHHHHh---CccccccCCCChHHHHHHHHHHHHHHHHHHHHHHCC----CCEEECc
Confidence 34567777743 2234544443322 2223334432 34567777777777765552 3565555
Q ss_pred -ChHHHHHHHHHHhc----CCCC----EEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCC---Cce
Q 014936 108 -GCTQAIDVAMALLS----RPGA----NILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ---NTV 175 (415)
Q Consensus 108 -g~~~al~~~~~~l~----~~gd----~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~---~~~ 175 (415)
|++++..+.+.++. ++|+ +|++++..|++....+...|.+++.++.+. +..+|+++|++++++ ++.
T Consensus 565 ~~ga~ge~agL~a~r~~~~~~G~~~r~~vlis~~aH~snp~sa~~~G~~vv~v~~d~--~G~iD~~~L~~~i~~~~~~la 642 (954)
T PRK05367 565 NAGAQGEYAGLLAIRAYHESRGEGHRDVCLIPSSAHGTNPASAVMAGMKVVVVACDE--NGNIDLDDLRAKAEEHADNLA 642 (954)
T ss_pred cHHHHHHHHHHHHHHHHhhccCCCCCCEEEEEchhhhhhHHHHHHCCCEEEEECCCC--CCCcCHHHHHHHHhccCCCeE
Confidence 45555534333332 4565 599999999988888999999999998754 346999999998865 466
Q ss_pred EEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCC----CC
Q 014936 176 ALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIV----PG 251 (415)
Q Consensus 176 ~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~----~G 251 (415)
+|++++|++-.+.. +++++|+++|+++|+++++|.++......-. ....++.+ ++..+++|+|+. +|
T Consensus 643 ~V~it~pst~G~~e---~~I~eI~~i~h~~G~~v~VDgA~~~al~~l~---~pg~~GAD---i~~~s~HK~f~~P~G~GG 713 (954)
T PRK05367 643 AIMITYPSTHGVFE---ETIREICEIVHEHGGQVYLDGANMNAQVGLA---RPGDIGAD---VSHLNLHKTFCIPHGGGG 713 (954)
T ss_pred EEEEEcCCCCeeec---CCHHHHHHHHHHcCCEEEEECcChhhccCCC---ChhhcCCC---EEEecCcccCCCCcCCCC
Confidence 77888888754444 4689999999999999999999964322111 12234443 778889999752 34
Q ss_pred ceEEEEEeeCCCCCCChHHHHHHHHhhc---------cccCCchhH----HHHHHHHhhCCCcHHHHHHHHHHHHHHHHH
Q 014936 252 WRLGWFVTTDPCGMFRKPKVVERMKKYF---------DILGDPATF----IQAAVPSILQQPDEVFFKKTLNLLKQSVDI 318 (415)
Q Consensus 252 ~r~G~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~----~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~ 318 (415)
..+|.+.+.+. +...+.... ..+...++. ....+..++.....+.+.+..+..-.++++
T Consensus 714 Pg~G~l~vr~~--------l~p~lpg~~v~~~~~~~~~g~v~ta~~g~al~~~~a~~yi~~~G~~Glr~~a~~~~~~A~Y 785 (954)
T PRK05367 714 PGVGPIGVKAH--------LAPFLPGHPVQIAGGETGIGAVSAAPFGSASILPISWMYIRMMGAEGLRQATEVAILNANY 785 (954)
T ss_pred CceEEEeeccc--------ccccCCCCccCcCCCCCCcCcchhHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH
Confidence 45888887531 111111100 000111222 222233444444567788888888889999
Q ss_pred HHHHhhcCCCCcCCCCCCC--ceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEe--eCChhhH
Q 014936 319 CYNKIKEIPCISCPHKPEG--SMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTF--AVDPYSL 394 (415)
Q Consensus 319 l~~~l~~~~~~~~~~~p~~--g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~--~~~~~~l 394 (415)
+.+.|++...+. +..|.+ ..-+.+++...+.....+..++.++| .++|+.... ..|...+.+||++ ..+++||
T Consensus 786 l~~~L~~~~~~~-~~~~~~~~~~e~i~~~~~~~~~~g~~~~di~krL-~d~G~~~~t-~~~pv~~~l~i~ptE~~s~~el 862 (954)
T PRK05367 786 IAKRLKDHYPVL-YTGANGRVAHECILDLRPLKESTGITVDDIAKRL-IDYGFHAPT-MSFPVAGTLMVEPTESESKAEL 862 (954)
T ss_pred HHHHHHhhcCcc-ccCCCCCcccceEEEeecccccCCCCHHHHHHHH-HHCCCeEee-cCCccCCEEEEEeeecCCHHHH
Confidence 999997642333 212211 11122333211101011456677776 677998644 2344578899998 4788999
Q ss_pred HHHHHHHHHHHHHHHH
Q 014936 395 EECLDRIKSFYQRHAK 410 (415)
Q Consensus 395 ~~~l~~l~~~~~~~~~ 410 (415)
+.+++.+..+.++..+
T Consensus 863 Dr~~~al~~i~~e~~~ 878 (954)
T PRK05367 863 DRFCDAMIAIRAEIDE 878 (954)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999999988877654
No 346
>KOG1358 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.73 E-value=3e-16 Score=137.98 Aligned_cols=341 Identities=16% Similarity=0.153 Sum_probs=226.3
Q ss_pred ccCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcC------CCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEE
Q 014936 32 KNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSE------KFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFV 105 (415)
Q Consensus 32 ~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~------~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i 105 (415)
.+|++++||++.+ +.++...+++++.....++.. .-.-|+...-+..+++.||+|+ ..++-++
T Consensus 91 i~G~~~~N~aS~N---fL~l~~~~~ike~a~~~lrkyGvGsCGPrGFYGt~DvHldlE~~iakF~--------G~E~aiv 159 (467)
T KOG1358|consen 91 IDGKDVLNFASAN---FLGLIENEEIKEEASFTLRKYGVGSCGPRGFYGTIDVHLDLEKRIAKFM--------GTEDAIV 159 (467)
T ss_pred ecCceeecccchh---hhhhcccHHHHHHHHHHHHHhCCCCcCCCcccccceeecccHHHHHHhh--------CCcceee
Confidence 4688899999998 445777899999888887752 2235777777889999999998 4556666
Q ss_pred eCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCc-----------
Q 014936 106 TSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNT----------- 174 (415)
Q Consensus 106 ~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~----------- 174 (415)
.+-+-+++..++.+++++||.|.+..-....+...++...-.+.++.++ |+++++..+.+.+
T Consensus 160 Ys~gF~ti~S~ipafsKrGDIi~~de~~nfaIq~GlqlSRS~i~~Fkhn-------dm~~lerll~E~~~~~~K~~k~~~ 232 (467)
T KOG1358|consen 160 YSYGFSTIESAIPAFSKRGDIIFVDEAVNFAIQKGLQLSRSTISYFKHN-------DMEDLERLLPEQEDEDQKNPKKAL 232 (467)
T ss_pred eccccchhhhcchhhhccCcEEEEehhhhHHHHHHHhhhhheeEEecCC-------CHHHHHHhccCcchhhhhcccccc
Confidence 6777888888999999999999999999988888888888888887763 6677765553322
Q ss_pred -eEEEecCC-CCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCC--CCcccccccCCCCCeEEEccCccccCCC
Q 014936 175 -VALVIINP-GNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGD--KPFVPMGVFGSTVPILTLGSLSKRWIVP 250 (415)
Q Consensus 175 -~~v~i~~p-~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~--~~~~~~~~~~~~~~~i~~~s~sK~~~~~ 250 (415)
+..+++.. .-++|.+ .++.+|+++..++...+|+||.++.+..+. .+.......+..+-.++++|+.-+++..
T Consensus 233 ~Rrfiv~EGl~~N~g~i---~pl~~iv~lk~Kyk~RvildEs~SfG~lg~~GrGvteH~~v~~~~iDiv~~sm~~alas~ 309 (467)
T KOG1358|consen 233 TRRFIVVEGLYANTGDI---CPLPEIVKLKNKYKFRVILDESLSFGVLGKTGRGVTEHFGVPITDIDIVTASMETALASG 309 (467)
T ss_pred ceEEEEEEeeccCCCcc---cccHHHHHHHhhheEEEEEecccccccccccCccccccCCCCccceeeeeeccccccccc
Confidence 33333333 4468888 457788888889999999999999887664 4444444444334448888888886666
Q ss_pred CceEEEEEeeCCCCCCChHHHHHHHHhh-ccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCC
Q 014936 251 GWRLGWFVTTDPCGMFRKPKVVERMKKY-FDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCI 329 (415)
Q Consensus 251 G~r~G~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~ 329 (415)
| |+.+++. .+. ..+++.-. ..++...++....++..++.. .++-....+.++.....+-+.|....++
T Consensus 310 G---gFc~G~~--~i~----~hQrLSg~~Y~fSAslPp~la~aa~~ai~i--~~~~p~~~~~L~~k~~~~H~~l~~~s~~ 378 (467)
T KOG1358|consen 310 G---GFCAGKS--FIA----DHQRLSGSGYCFSASLPPYLAGAAIKAILI--EEWNPEIVQPLRAKVAKFHAALSSNSGF 378 (467)
T ss_pred C---ceeecce--eeE----eeeeccccceeeeccCchhhhhhHHHHHHH--HhhCcchhhhhhccccccchhhhcCCce
Confidence 5 6666633 111 22333333 223445566666666666543 1333345556666666677777765556
Q ss_pred cCCCCCCCceEEEEecCccccCCCCCH----HHHHHHHHhhcCeEEEcCCCC------CCCCeEEEEe--eCChhhHHHH
Q 014936 330 SCPHKPEGSMAVMLKLNLSLLDDIIDD----IDFCFKLAKEESVIILPGTAV------GLKNWLRVTF--AVDPYSLEEC 397 (415)
Q Consensus 330 ~~~~~p~~g~~~~~~l~~~~~~~~~~~----~~~~~~ll~~~gi~v~~g~~~------~~~~~iRi~~--~~~~~~l~~~ 397 (415)
.+...|. +..+.+.+..... ..++. ++++...+.+ ++.+.....- ..+..+||++ +.++++++++
T Consensus 379 ~v~~~~~-SPi~hl~l~~~~~-s~e~e~~lL~eivd~~i~~-~~ll~~a~~~~~~e~~~~~pSiri~~~a~~seeel~ra 455 (467)
T KOG1358|consen 379 IVSGSPE-SPIIHLQLERSYG-SREKEEKLLEEIVDKCIAE-GVLLTRAKYLEKLERCPIPPSIRICVSAGMSEEELERA 455 (467)
T ss_pred EEecCcC-Cceeeeeeccccc-chHHHHHHHHHHHHHHHhh-cceehhhhhhhhcccCCCCCcEEEEEeCCCCHHHHHHH
Confidence 6333333 4455555543211 11122 2334444444 7777544332 2256899999 4789999999
Q ss_pred HHHHHHHHHH
Q 014936 398 LDRIKSFYQR 407 (415)
Q Consensus 398 l~~l~~~~~~ 407 (415)
.+.|++....
T Consensus 456 ~~~ik~~~~~ 465 (467)
T KOG1358|consen 456 AELIKEVASA 465 (467)
T ss_pred HHHHHHHHHh
Confidence 9999988764
No 347
>PLN02452 phosphoserine transaminase
Probab=99.71 E-value=1.7e-14 Score=133.50 Aligned_cols=328 Identities=13% Similarity=0.073 Sum_probs=209.7
Q ss_pred ceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCC-----CCCC-CCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCCh
Q 014936 36 KVISLAMGDPTVHSCFHTTHVATEAVAEALLSEK-----FNGY-APTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGC 109 (415)
Q Consensus 36 ~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~-----~~~y-~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~ 109 (415)
..++|+-|- ...++.|++++.+.+.+-. .... .-.....++-+.+.+.+.+.++.+-+-+-+++..|+
T Consensus 7 ~~~~f~pGP------~~lp~~Vl~~~~~~~~~~~~~g~s~~~~sHRs~~f~~i~~~~~~~L~~l~~~p~~y~v~~l~Gsg 80 (365)
T PLN02452 7 RVFNFSAGP------ATLPANVLAKAQAELYNWEGSGMSVMEMSHRGKEFLSIIQKAEADLRELLDIPDNYEVLFLQGGA 80 (365)
T ss_pred ceEeeeCCC------CCCCHHHHHHHHHHHhcccccCccccccCCCchHHHHHHHHHHHHHHHHhCCCCCceEEEEeCcc
Confidence 467888874 5567899999887653200 0001 111223344444445554444532222345677889
Q ss_pred HHHHHHHHHHhcCCCCEEEEcCCCCcc--hHHHHHhCCCeEEEeeccCCCC--CCCChhHHHhhcCCCceEEEecCCCCc
Q 014936 110 TQAIDVAMALLSRPGANILLPRPGFPI--YELSAAFRHIEVRHFDLLPDKG--WEVDLDDIESLADQNTVALVIINPGNP 185 (415)
Q Consensus 110 ~~al~~~~~~l~~~gd~vi~~~p~y~~--~~~~~~~~g~~~~~~~~~~~~~--~~~~~~~l~~~~~~~~~~v~i~~p~np 185 (415)
|.++++++..++.+|+++++...++++ +.+.++.+|...+.... +..+ ..+++++++. +++.+.+.+++....
T Consensus 81 t~~~ea~~~nl~~~~~~~l~~~~G~fg~r~~~~a~~~g~~~~~~~~-~~~~~~~~~~~~~~~~--~~~~~~v~~~hnETs 157 (365)
T PLN02452 81 STQFAAIPLNLCKPGDKADFVVTGSWSKKAAKEAKKYCKTNVIASG-KDEKYTKIPSVSEWEL--TPDAKFVHICANETI 157 (365)
T ss_pred HHHHHHHHHhcCCCCCeEEEEECCHHHHHHHHHHHHhCCCcEEEec-CCCCCCCCCChHHcCC--CCCCcEEEECCCCCC
Confidence 999999999999999988888777665 45567778864333321 1121 1356666532 345677888888889
Q ss_pred cccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCC
Q 014936 186 CGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGM 265 (415)
Q Consensus 186 tG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~ 265 (415)
||+.++ +++++. ++++++|.+.+. +..+..+..++ +...|..|.+|.+| +|.+++++
T Consensus 158 tGv~~~--~~~~i~------~~~lvVDa~Ss~----g~~pidv~~~~-----v~~~saqK~lGP~G--l~~v~vr~---- 214 (365)
T PLN02452 158 HGVEFK--DYPDVG------NVPLVADMSSNF----LSKPVDVSKYG-----VIYAGAQKNVGPSG--VTIVIIRK---- 214 (365)
T ss_pred CcEecC--cccccC------CCeEEEECCccc----cCcccCHHHcC-----EEEEecccccCCCC--eEEEEEcH----
Confidence 999643 344442 379999999987 33444444443 23458899999888 78888865
Q ss_pred CChHHHHHHHHh-------------hccccCCchhHHHHHHHHhhCCCcHH-HHHHHHHHHHHHHHHHHHHhhcCCCCcC
Q 014936 266 FRKPKVVERMKK-------------YFDILGDPATFIQAAVPSILQQPDEV-FFKKTLNLLKQSVDICYNKIKEIPCISC 331 (415)
Q Consensus 266 ~~~~~~~~~~~~-------------~~~~~~~~~~~~~~a~~~~l~~~~~~-~~~~~~~~~~~~~~~l~~~l~~~~~~~~ 331 (415)
+++++... ......+++....+++..+|+...++ .++.+.++.+++.+++.+.|++.+|+..
T Consensus 215 ----~~l~~~~~~~~~~~~~~~~~~~~s~~~TP~v~~i~~l~~aL~~l~~~gGl~~~~~r~~~~a~~l~~~l~~~~G~y~ 290 (365)
T PLN02452 215 ----DLIGNARPITPGMLDYKIHAENDSLYNTPPCFGIYMCGLVFEDLLAQGGLKAMEKRNIRKADLLYDAIDESNGFYV 290 (365)
T ss_pred ----HHHhhcccCCCchhhHHHHHhcCCccCChhHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhCCCccc
Confidence 23222111 11123577777888888887754443 5889999999999999999998767621
Q ss_pred C-CCC--CCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEe--eCChhhHHHHHHHHHHHHH
Q 014936 332 P-HKP--EGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTF--AVDPYSLEECLDRIKSFYQ 406 (415)
Q Consensus 332 ~-~~p--~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~--~~~~~~l~~~l~~l~~~~~ 406 (415)
. ..+ .....+.+.++.. ....+|... ++++|+...+|.... +.+|+|+ +.+.++++.+++.++++-+
T Consensus 291 ~~~~~~~rs~~~vsF~~~~~-----~~~~~f~~~-~~~~g~~~~~G~r~~--gg~R~s~yna~~~~~v~~L~~~m~~f~~ 362 (365)
T PLN02452 291 CPVEKSVRSLMNVPFTLGGS-----ELEAEFVKE-AAKAGMVQLKGHRSV--GGMRASIYNAMPLAGVEKLVAFMKDFQA 362 (365)
T ss_pred CCCChHHhCCeEEEEEcCCc-----hhHHHHHHH-HHHCCCcccCCcccc--CceEEECcCCCCHHHHHHHHHHHHHHHH
Confidence 1 111 1333455555431 235555555 578899999887542 3499999 6799999999998888776
Q ss_pred H
Q 014936 407 R 407 (415)
Q Consensus 407 ~ 407 (415)
+
T Consensus 363 ~ 363 (365)
T PLN02452 363 K 363 (365)
T ss_pred h
Confidence 4
No 348
>TIGR03799 NOD_PanD_pyr putative pyridoxal-dependent aspartate 1-decarboxylase. This enzyme is proposed here to be a form of aspartate 1-decarboxylase, pyridoxal-dependent, that represents a non-orthologous displacement to the more widely distributed pyruvoyl-dependent form (TIGR00223). Aspartate 1-decarboxylase makes beta-alanine, used usually in pathothenate biosynthesis, by decarboxylation from asparatate. A number of species with the PanB and PanC enzymes, however, lack PanD. This protein family occurs in a number of Proteobacteria that lack PanD. This enzyme family appears to be a pyridoxal-dependent enzyme (see pfam00282). The family was identified by Partial Phylogenetic Profiling; members in Geobacter sulfurreducens, G. metallireducens, and Pseudoalteromonas atlantica are clustered with the genes for PanB and PanC. We suggest the gene symbol panP (panthothenate biosynthesis enzyme, Pyridoxal-dependent).
Probab=99.71 E-value=1.1e-14 Score=140.43 Aligned_cols=267 Identities=15% Similarity=0.124 Sum_probs=172.8
Q ss_pred HHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCC----------C-CCCcEEEeCChHHHHHHHHHHhcC-------
Q 014936 61 VAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYK----------L-TPNDVFVTSGCTQAIDVAMALLSR------- 122 (415)
Q Consensus 61 ~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~----------~-~~~~i~i~~g~~~al~~~~~~l~~------- 122 (415)
+...++... ..+...+...++++.+.+|+.+..+.. . +...-++|+|||+++..++.+..+
T Consensus 110 l~~~lN~n~-~~~~~spa~t~lE~~v~~wl~~l~~~~~~~~~~~~~~~~~~~~G~~tsGGS~ANl~Al~~AR~~~~~~~~ 188 (522)
T TIGR03799 110 LMVALNQNL-VKIETSKAFTPLERQVLGMMHHLVYGQDDDFYRKWMHSADHSLGAFCSGGTVANITALWVARNRLLKADG 188 (522)
T ss_pred HHHHhcCCc-ceeecCcchHHHHHHHHHHHHHHhccCcccchhhcccCCCCCCeEEcCchHHHHHHHHHHHHHHhccccc
Confidence 444444432 344444567899999999998866310 1 112357899999998887766431
Q ss_pred -------------------CCCEEEEcCCCCcchHHHHHhCCC---eEEEeeccCCCCCCCChhHHHhhcC----CCceE
Q 014936 123 -------------------PGANILLPRPGFPIYELSAAFRHI---EVRHFDLLPDKGWEVDLDDIESLAD----QNTVA 176 (415)
Q Consensus 123 -------------------~gd~vi~~~p~y~~~~~~~~~~g~---~~~~~~~~~~~~~~~~~~~l~~~~~----~~~~~ 176 (415)
++..|++++-.|+++...+...|+ +++.+|++. ++.+|+++|++.++ .+++.
T Consensus 189 ~~~~~~~~gl~~~~~~~~~~~~~v~~S~~~H~S~~kaa~~lglg~~~v~~vp~d~--~g~~d~~~L~~~i~~~~~~g~~~ 266 (522)
T TIGR03799 189 DFKGVAREGLFAALKHYGYDGLAILVSERGHYSLGKAADVLGIGRDNLIAIKTDA--NNRIDVDALRDKCAELAEQNIKP 266 (522)
T ss_pred cccccccccchhhhhhccCCceEEEECCCchHHHHHHHHHcCCCcccEEEEEeCC--CCcCCHHHHHHHHHHHHHCCCCc
Confidence 134689999999999999998888 688888853 45799999999885 34444
Q ss_pred EEec--CCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCc-ccccccCCCCCeEEEccCccccCCCCce
Q 014936 177 LVII--NPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPF-VPMGVFGSTVPILTLGSLSKRWIVPGWR 253 (415)
Q Consensus 177 v~i~--~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~-~~~~~~~~~~~~i~~~s~sK~~~~~G~r 253 (415)
+.++ ..++.||.+ +++++|+++|+++|+++++|.+|++...-.... ..+..+... ..+..+.+|++ .....
T Consensus 267 ~~vvataGtt~tGai---Dpl~eIa~i~~~~g~~lHVDaA~gg~~~~~~~~r~~l~gle~a--DSit~d~HK~l-~~P~g 340 (522)
T TIGR03799 267 LAIVGVAGTTETGNI---DPLDEMADIAQELGCHFHVDAAWGGATLLSNTYRHLLKGIERA--DSVTIDAHKQL-YVPMG 340 (522)
T ss_pred EEEEEEecCcCCCCc---CCHHHHHHHHHHcCCeEEEEchhhhHHHhCHHHHHHhcCchhC--CEEEEChhhcC-CcCcc
Confidence 4443 556789999 778999999999999999999998754221111 112222111 15566899963 33344
Q ss_pred EEEEEeeCCCCCCChHHHHHHHHhh---c-----------cccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHH
Q 014936 254 LGWFVTTDPCGMFRKPKVVERMKKY---F-----------DILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDIC 319 (415)
Q Consensus 254 ~G~~~~~~~~~~~~~~~~~~~~~~~---~-----------~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l 319 (415)
+|.++.+++. +.+.+... . ...++.+..+ ..+...|+......+++..++..++++++
T Consensus 341 ~G~llvr~~~-------~~~~~~~~~~Yl~~~~~~d~~~~~legsR~~~a-l~lw~aL~~lG~~G~~~ii~~~~~la~~l 412 (522)
T TIGR03799 341 AGMVLFKDPA-------LMSAIEHHAEYILRKGSKDLGSHTLEGSRPGMA-MLVYAGLHIIGRKGYELLIDQSIEKAKYF 412 (522)
T ss_pred cEEEEEeCHH-------HHHHhccCcchhcCCCCCccccceeecCcchHH-HHHHHHHHHHhHHHHHHHHHHHHHHHHHH
Confidence 8998887632 33333221 0 0011112111 22334444444578899999999999999
Q ss_pred HHHhhcCCCCcCCCCCCCceEEEEec
Q 014936 320 YNKIKEIPCISCPHKPEGSMAVMLKL 345 (415)
Q Consensus 320 ~~~l~~~~~~~~~~~p~~g~~~~~~l 345 (415)
.+.|++.|+++++..|.-+. +.+++
T Consensus 413 ~~~L~~~~~~el~~~p~l~i-v~Fr~ 437 (522)
T TIGR03799 413 ADLIQQQPDFELVTEPELCL-LTYRY 437 (522)
T ss_pred HHHHhhCCCeEEecCCCccE-EEEEE
Confidence 99999999999664454443 33443
No 349
>TIGR03251 LAT_fam L-lysine 6-transaminase. Characterized members of this protein family are L-lysine 6-transaminase, also called lysine epsilon-aminotransferase (LAT). The immediate product of the reaction of this enzyme on lysine, 2-aminoadipate 6-semialdehyde, becomes 1-piperideine 6-carboxylate, or P6C. This product may be converted subsequently to pipecolate or alpha-aminoadipate, lysine catabolites that may be precursors of certain seconary metabolites.
Probab=99.71 E-value=1.6e-14 Score=137.72 Aligned_cols=343 Identities=13% Similarity=0.120 Sum_probs=190.1
Q ss_pred cCcceeEecccCCCCCCCCCCcHHHH--HHHHHHHhcCCCCCCCC-CCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCCh
Q 014936 33 NEKKVISLAMGDPTVHSCFHTTHVAT--EAVAEALLSEKFNGYAP-TAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGC 109 (415)
Q Consensus 33 ~~~~~i~l~~g~~~~~~~~~~~~~~~--~a~~~~~~~~~~~~y~~-~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~ 109 (415)
+|+.++|+..|.-....+ -.+|.+. +++.+++....+..... ....+. ...+++.+.+..+ +-..+.++++++|
T Consensus 36 dG~~ylD~~~g~~~~~lG-h~~p~v~~~~ai~~q~~~~~~~~~~~~~~~~~~-~~~l~~~l~~~~~-~~~~~~v~f~~sG 112 (431)
T TIGR03251 36 DGRRYLDMFSFFASMALG-MNHPALVDDLAFRARLGAAAVNKPSNSDVYTVA-MARFVDTFARVLG-DPALPHLFFIEGG 112 (431)
T ss_pred CCCChhhcccChhhcCCC-CCChhhhHHHHHHHHHHHhhhcccccCCCCCHH-HHHHHHHHHHhcC-CCCcCEEEEeCCc
Confidence 478889997775322211 2468888 88888877532111111 111222 3334433332211 1134689999999
Q ss_pred HHHHHHHHHHhcC--------C------CCEEEEcCCCCcchHHHHHhC-CCe-EE--Eeec-------cCCC--CC---
Q 014936 110 TQAIDVAMALLSR--------P------GANILLPRPGFPIYELSAAFR-HIE-VR--HFDL-------LPDK--GW--- 159 (415)
Q Consensus 110 ~~al~~~~~~l~~--------~------gd~vi~~~p~y~~~~~~~~~~-g~~-~~--~~~~-------~~~~--~~--- 159 (415)
++|++.+++.... . +.+|+....+|++....+... |.. .. ..+. .+.. .+
T Consensus 113 sEAve~AlklAr~~t~~~~~~~g~~~~~~~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 192 (431)
T TIGR03251 113 ALAVENALKTAFDWKSRHNQARGIPAALGTQVLHLRQAFHGRSGYTLSLTNTDPRKTARFPKFDWPRIDNPKLTFPLDAP 192 (431)
T ss_pred HHHHHHHHHHHHHHhhcchhhcCCCCCCCceEEEECCccCCcchhhhhccCCccccccCCCCCCCccCCCCcccCCcccc
Confidence 9999999988631 1 367999999999876554332 211 00 0010 0000 00
Q ss_pred --C-------CChhHHHhhcC--CCceEEEecCC-CCccccC-CCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcc
Q 014936 160 --E-------VDLDDIESLAD--QNTVALVIINP-GNPCGNV-YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFV 226 (415)
Q Consensus 160 --~-------~~~~~l~~~~~--~~~~~v~i~~p-~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~ 226 (415)
. -+++.+++.+. +...+.++..| +...|.+ .+.+.+++|.++|++||+++|+||++.++...|...
T Consensus 193 ~~~~~~~~~~~~l~~~~~~~~~~~~~iAavivEPv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GrtG~~~- 271 (431)
T TIGR03251 193 NLDQVIALEEEALRQARAAFAERPHDIACFIAEPIQGEGGDNHFRPEFLRAMRALCDEHDALLIFDEVQTGVGLTGTAW- 271 (431)
T ss_pred ccchhhHHHHHHHHHHHHHHHhCCCcEEEEEEeccccCCCCcCCCHHHHHHHHHHHHHcCCEEEEecchhccCccchHH-
Confidence 0 12344444553 23344555666 5556765 688999999999999999999999999876654321
Q ss_pred cccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHHH-HHh--hccccCCchhHHHHHHHHhhCCCcH-
Q 014936 227 PMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVER-MKK--YFDILGDPATFIQAAVPSILQQPDE- 302 (415)
Q Consensus 227 ~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~~~~a~~~~l~~~~~- 302 (415)
....++..+.++ +++|.+ +. .|++.... +. ++... +.. ....+.+.++++..++.+.|+...+
T Consensus 272 a~~~~gv~PDi~---~~gK~~--~~--~g~~~~~~---i~---~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l~~~ 338 (431)
T TIGR03251 272 AYQQLGVQPDIV---AFGKKT--QV--CGIMAGRR---VD---EVADNVFAVPSRLNSTWGGNLVDMVRATRILEIIEEE 338 (431)
T ss_pred HHHhcCCCCCEE---EecccC--cc--ceEEecch---HH---HhhhhcccCccccCCCCCCCHHHHHHHHHHHHHHHhc
Confidence 112223222333 468984 22 25554321 00 11111 110 1223456788888888888765322
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCe
Q 014936 303 VFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNW 382 (415)
Q Consensus 303 ~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~ 382 (415)
...++..+.-+..++.+.+..++.+++... ....|.++.+.++.. .....+...+ .++||.+.|.. ...
T Consensus 339 ~l~~~~~~~g~~l~~~L~~l~~~~~~~i~~-vrg~G~~~~i~~~~~-----~~~~~~~~~l-~~~Gvl~~~~g----~~~ 407 (431)
T TIGR03251 339 RLVDNARVQGAHLLARLHELAAEFPHLVSN-PRGRGLMCAFDLPST-----ADRDEVIRQL-YREGVLLLGCG----ERS 407 (431)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHhCccceec-ccccceeEEEEeCCH-----HHHHHHHHHH-HhCCeEEecCC----CCe
Confidence 223344444444444444433345423212 234467777777531 1123455555 56799998753 256
Q ss_pred EEEEe--eCChhhHHHHHHHHHH
Q 014936 383 LRVTF--AVDPYSLEECLDRIKS 403 (415)
Q Consensus 383 iRi~~--~~~~~~l~~~l~~l~~ 403 (415)
+|+++ .++++++++++++|.+
T Consensus 408 lr~~P~l~~t~~eid~~l~~l~~ 430 (431)
T TIGR03251 408 IRFRPPLTVTREEIDAAIDAIRR 430 (431)
T ss_pred EEEECCccCCHHHHHHHHHHHHh
Confidence 89887 4789999999999875
No 350
>TIGR00474 selA seryl-tRNA(sec) selenium transferase. In bacteria, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This model describes SelA. This model excludes homologs that appear to differ in function from Frankia alni, Helicobacter pylori, Methanococcus jannaschii and other archaea, and so on.
Probab=99.70 E-value=2.8e-14 Score=135.29 Aligned_cols=314 Identities=16% Similarity=0.118 Sum_probs=183.3
Q ss_pred CCCcHHHHHHHHHHHhcCCCCCCCC-----CCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCC
Q 014936 51 FHTTHVATEAVAEALLSEKFNGYAP-----TAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGA 125 (415)
Q Consensus 51 ~~~~~~~~~a~~~~~~~~~~~~y~~-----~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd 125 (415)
.+.++.+++++.+.+.......|.- ..-+..+++.++++++ .+..++++++++|+.+++.+ +.+||
T Consensus 91 s~l~~~vieAv~~~~~~y~~l~~~l~~g~~g~r~~~le~~lA~l~g--------ae~alvv~sg~aAi~l~l~~-l~~Gd 161 (454)
T TIGR00474 91 APLAEEAIEAVTDAARGYSNLEYDLETGKRGSRYSHVEGLLCELTG--------AEDALVVNNNAAAVLLALNT-LAKGK 161 (454)
T ss_pred CCCCHHHHHHHHHHHhcccchhccccccccchHHHHHHHHHHHHhC--------CCcEEEECCHHHHHHHHHHH-hCCcC
Confidence 3457899999988876422112211 1123688888998872 34466788888999988865 47899
Q ss_pred EEEEcCCCCc---c---hHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCcc--cc--CCCHHHH
Q 014936 126 NILLPRPGFP---I---YELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPC--GN--VYSYQHL 195 (415)
Q Consensus 126 ~vi~~~p~y~---~---~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~npt--G~--~~~~~~l 195 (415)
+|+++...|. + +....+..|++++.++.+. ..++++++++++++|+++++++++|++ |. . .++
T Consensus 162 eVIvs~~e~v~~ggs~~i~~~~~~~G~~~~~v~~~~----~~~l~dle~aI~~~T~lv~~~h~sN~~~~G~~~~---~dl 234 (454)
T TIGR00474 162 EVIVSRGELVEIGGSFRIPDVMEQSGAKLVEVGTTN----RTHLKDYEDAITENTALLLKVHTSNYRIVGFTEE---VSI 234 (454)
T ss_pred EEEECCChhhhhcchhhHHHHHHHcCCEEEEeCCCC----CCCHHHHHHhcCcCCEEEEEEccCcccccCCCCC---CCH
Confidence 9999987642 1 2345677899998887532 247899999999999999999999985 53 4 468
Q ss_pred HHHHHHHhhcCcEEEEccccCCcccC---CCCccc----ccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCCh
Q 014936 196 QKLAETANKLKTLVIADEVYGHLVFG---DKPFVP----MGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRK 268 (415)
Q Consensus 196 ~~i~~~~~~~~~~li~De~~~~~~~~---~~~~~~----~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~ 268 (415)
++|+++|+++|+++++|.+.+.+.-. +-...+ ....+.+ ++++|.+|.++.| ..|++++++
T Consensus 235 ~~I~~la~~~g~~vivD~~sG~l~~~~~~gl~~~p~~~~~~~~GaD---iv~fSg~K~LgGp--~~G~i~g~~------- 302 (454)
T TIGR00474 235 AELVALGREHGLPVMEDLGSGSLVDLSRYGLPDEPTVQEVIAAGVD---LVTFSGDKLLGGP--QAGIIVGKK------- 302 (454)
T ss_pred HHHHHHHHHcCCeEEEECCCcccccchhccCCCCcccccHhHcCCC---EEEecCccccCCC--eEEEEEECH-------
Confidence 88999999999999999864432100 000111 1122333 8888999997655 478888764
Q ss_pred HHHHHHHHhhcc-ccCCchhH----HHHHHHHhhCCCc-------HHHHHHHHHHHHHHHHHHHHHhhcC--CCCcCCCC
Q 014936 269 PKVVERMKKYFD-ILGDPATF----IQAAVPSILQQPD-------EVFFKKTLNLLKQSVDICYNKIKEI--PCISCPHK 334 (415)
Q Consensus 269 ~~~~~~~~~~~~-~~~~~~~~----~~~a~~~~l~~~~-------~~~~~~~~~~~~~~~~~l~~~l~~~--~~~~~~~~ 334 (415)
++++.++.... ........ .+.++..++.... -.-+....++++++...+.+.|+.. +++.+-..
T Consensus 303 -~~i~~l~~~~l~r~lr~~k~~la~l~~~l~~~~~~~~a~~~~~~l~~l~~~~~~~~~~A~~la~~L~~~~~~~~~~~~~ 381 (454)
T TIGR00474 303 -ELIERLKKNPLTRALRVDKLTLAALEATLRLYLDPEKALEKIPTLRMLTQSPEELRARAERLAKRLKAALGPGFELEIV 381 (454)
T ss_pred -HHHHhhhhchhHHHHhhChHHHHHHHHHHHHHhCchhhhhhchHHHHhccCHHHHHHHHHHHHHHHHhhccCCceEEEE
Confidence 45554433211 00111111 1222222222110 0122334456666777777777653 33221111
Q ss_pred C-----CCc------e-EEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEe-eCChhhHHHHHHHH
Q 014936 335 P-----EGS------M-AVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTF-AVDPYSLEECLDRI 401 (415)
Q Consensus 335 p-----~~g------~-~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~-~~~~~~l~~~l~~l 401 (415)
+ .+| + -+-+.+... + .+..++.. .|++....+..- -.++.+.+.+ +..++|++..+++|
T Consensus 382 ~~~~~~ggg~~p~~~l~~~~v~~~~~---~-~~~~~l~~-~lr~~~~~ii~r---~~~~~~~ld~r~~~~~~~~~~~~~~ 453 (454)
T TIGR00474 382 PGLSQVGGGSLPDERLPSYAVTLTPD---G-LSAEKLEA-RLRELPPPIIGR---IEDDRFLLDLRTLLEDEEELLIEAL 453 (454)
T ss_pred EcCCcccCCCCcCCCCCeEEEEEecC---C-CCHHHHHH-HHhcCCCCEEEE---EECCEEEEEeCcCCHHHHHHHHHHh
Confidence 1 111 1 111222211 1 13455544 446655333321 1257788888 56778888777765
No 351
>TIGR01365 serC_2 phosphoserine aminotransferase, Methanosarcina type. This model represents a variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in a small number of distantly related species, including Caulobacter crescentus, Mesorhizobium loti, and the archaeon Methanosarcina barkeri.
Probab=99.70 E-value=2.4e-14 Score=132.46 Aligned_cols=313 Identities=15% Similarity=0.092 Sum_probs=194.4
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhc-CCCCEEEEcCCCCc
Q 014936 57 ATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLS-RPGANILLPRPGFP 135 (415)
Q Consensus 57 ~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~-~~gd~vi~~~p~y~ 135 (415)
.++++++.+-...+ +. +...++-+.+.+.+.+.++.+.+.+-+++++|||.++++++..++ ++|++|++.. .|+
T Consensus 19 ~~~~~~~~~~~~~H--Rs--~~F~~i~~e~~~~L~~l~~~~~~~~v~~l~GsGT~a~Eaa~~nl~~~~g~~vLv~g-~FG 93 (374)
T TIGR01365 19 SIEELKNAPLGRSH--RS--KLGKEKLAEAIKKTREMLGVPADYLIGIVPASDTGAVEMALWSMLGCRGVDVLAWE-SFG 93 (374)
T ss_pred hHHHHhhhhcccCc--CC--HHHHHHHHHHHHHHHHHhCCCCCcEEEEECCchHHHHHHHHHHcCCCCCCeEEEEC-HHH
Confidence 66667665433221 12 233455555555555545532223346779999999999999998 5888888865 444
Q ss_pred c-hH-HHHHhCCC-eEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEc
Q 014936 136 I-YE-LSAAFRHI-EVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIAD 212 (415)
Q Consensus 136 ~-~~-~~~~~~g~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D 212 (415)
. +. +.++..|+ ++..+... .+..+++++++. + +.|.+++....||+..|. ++++..+ ++.++|+|
T Consensus 94 ~r~~~eia~~~g~~~v~~l~~~--~g~~~~~~~ve~--~---~~v~~vhnETSTGv~npv---~~i~~~~--~~~lliVD 161 (374)
T TIGR01365 94 KGWVTDVTKQLKLPDVRVLEAE--YGKLPDLKKVDF--K---NDVVFTWNGTTSGVRVPN---GDFIPAD--REGLTICD 161 (374)
T ss_pred HHHHHHHHHhcCCCCcEEEcCC--CCCCCCHHHcCC--C---CCEEEecCCCchheeccc---ccccccc--CCCcEEEE
Confidence 3 24 77888999 47777542 444688988873 1 236788888899999775 3444322 48999999
Q ss_pred cccCCcccCCCCcccccccCCCCCeEEEccCccccCC-CCceEEEEEeeCCCCCCChHHHHHHHHh--------------
Q 014936 213 EVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIV-PGWRLGWFVTTDPCGMFRKPKVVERMKK-------------- 277 (415)
Q Consensus 213 e~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~-~G~r~G~~~~~~~~~~~~~~~~~~~~~~-------------- 277 (415)
.+-+.+. .+..+..+ .+++.|..|.+++ || +++++.+++ .+++.+.
T Consensus 162 avSs~g~----~~l~~d~i-----Dv~~tgsQK~L~~ppG--ls~v~vs~~--------Al~~~~~~~~y~~~~~~~~~~ 222 (374)
T TIGR01365 162 ATSAAFA----QDLDYHKL-----DVVTFSWQKVLGGEGA--HGMLILSPR--------AVARLESYTPAWPLPKIFRLT 222 (374)
T ss_pred ccchhcC----CCCChhHC-----cEEEEechhccCCCCc--eEEEEECHH--------HHHHHhhcCCCCCChhhhccc
Confidence 9998733 22333322 2677788999876 45 666666542 2222110
Q ss_pred ---------h-ccccCCchhHHHHHHHHhhCCCcHH-HHHHHHHHHHHHHHHHHHHhhcCCCCcCCCC-CC-Cce-EEEE
Q 014936 278 ---------Y-FDILGDPATFIQAAVPSILQQPDEV-FFKKTLNLLKQSVDICYNKIKEIPCISCPHK-PE-GSM-AVML 343 (415)
Q Consensus 278 ---------~-~~~~~~~~~~~~~a~~~~l~~~~~~-~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~-p~-~g~-~~~~ 343 (415)
. ..+..+++.....++..+|+...++ .++.+.++++++.+.+++.++.++.+..+.. +. .+. ...+
T Consensus 223 ~~~~~~~~~~~~~t~~TP~v~~l~a~~~~l~~i~~egGle~~~~Rh~~~a~~l~~~l~~lg~l~~~~~~~~~rS~tvt~v 302 (374)
T TIGR01365 223 KGGKLNKKIFEGSTINTPSMLCVEDWLDALKWAESIGGLKPLIARADDNLAVLEAFVAKNNWIHFLAETPEIRSNTSVCL 302 (374)
T ss_pred cccchhhhhhcCCCCCChHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHHCCCcccCCCChhhcCCCeEEE
Confidence 0 1122345555556666666432233 5899999999999999999999843553311 11 122 2333
Q ss_pred ecCccccCCCC-C-----HHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEe-e-CChhhHHHHHHHHHHHHH
Q 014936 344 KLNLSLLDDII-D-----DIDFCFKLAKEESVIILPGTAVGLKNWLRVTF-A-VDPYSLEECLDRIKSFYQ 406 (415)
Q Consensus 344 ~l~~~~~~~~~-~-----~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~-~-~~~~~l~~~l~~l~~~~~ 406 (415)
.++.+...... + ..+ +...++++||.+.+|..-.....|||+. + .+.++++.+++.|.-+.+
T Consensus 303 ~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~gi~i~~G~~~~~~~~fRIg~~G~i~~~di~~l~~~l~~~~~ 372 (374)
T TIGR01365 303 KVVDPAIDALDEDAQADFAKE-LISTLEKEGVAYDIGSYRDAPSGLRIWCGATVEKSDLECLCPWLDWAFA 372 (374)
T ss_pred EeCCccccccccchhhHHHHH-HHHHHHHCCEEEeccccccCCCceEEecCCcCCHHHHHHHHHHHHHHHh
Confidence 44332110000 1 244 4445567799998887654468899999 3 789999999999986654
No 352
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=99.70 E-value=8.3e-14 Score=140.09 Aligned_cols=306 Identities=13% Similarity=0.084 Sum_probs=195.7
Q ss_pred CCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcC--------CCCEEEEcCCCCcchHHHHHhCCCeE
Q 014936 77 AGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSR--------PGANILLPRPGFPIYELSAAFRHIEV 148 (415)
Q Consensus 77 ~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~--------~gd~vi~~~p~y~~~~~~~~~~g~~~ 148 (415)
.|..++...+.+|+.+..|.+ ..-+..++|+++-.+.+.++.. .-++|+++...|+.....++..|+++
T Consensus 526 qG~lq~i~elq~~l~eltGmd---~~Sl~p~aGA~gE~agL~aiR~y~~~rge~~R~~vlip~saHgtnPasa~~~G~~V 602 (939)
T TIGR00461 526 EGYQELIAQLEKWLCSITGFD---AISLQPNSGAQGEYAGLRVIRSYHESRGENHRNICLIPVSAHGTNPASAAMAGMQV 602 (939)
T ss_pred HHHHHHHHHHHHHHHHHHCCC---CcccCCchHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEccccCcCHHHHHHCCCEE
Confidence 455667777777776655543 2334445555554443433321 12579999999988888899999999
Q ss_pred EEeeccCCCCCCCChhHHHhhcCC---CceEEEecCCCCccccCCCHHH-HHHHHHHHhhcCcEEEEccccCCcccCCCC
Q 014936 149 RHFDLLPDKGWEVDLDDIESLADQ---NTVALVIINPGNPCGNVYSYQH-LQKLAETANKLKTLVIADEVYGHLVFGDKP 224 (415)
Q Consensus 149 ~~~~~~~~~~~~~~~~~l~~~~~~---~~~~v~i~~p~nptG~~~~~~~-l~~i~~~~~~~~~~li~De~~~~~~~~~~~ 224 (415)
+.++.+. ++.+|+++|++.+++ ++++|++++|+| +|.+ ++ +++|+++|+++|.++++|.++......
T Consensus 603 v~V~~d~--~G~iDle~L~~~i~~~~~~taaV~iT~pst-~G~~---e~~I~eI~~iah~~G~~v~VDgAq~~al~~--- 673 (939)
T TIGR00461 603 VPVNCDQ--DGNIDLVDLKNKAEQHGDELAAVMVTYPST-HGVF---EPTIQHACDIVHSFGGQVYLDGANMNAQVG--- 673 (939)
T ss_pred EEeccCC--CCCcCHHHHHHHHhhcCCceEEEEEEeCCc-Ccee---cccHHHHHHHHHHcCCEEEEEecChhhCCC---
Confidence 9998753 456999999999974 788999999999 7888 55 999999999999999999999652211
Q ss_pred cccccccCCCCCeEEEccCccccC----CCCceEEEEEeeCCCCCCChHHHHHHHH---------------hhccc-c-C
Q 014936 225 FVPMGVFGSTVPILTLGSLSKRWI----VPGWRLGWFVTTDPCGMFRKPKVVERMK---------------KYFDI-L-G 283 (415)
Q Consensus 225 ~~~~~~~~~~~~~i~~~s~sK~~~----~~G~r~G~~~~~~~~~~~~~~~~~~~~~---------------~~~~~-~-~ 283 (415)
......++.+ ++.+|.+|+|+ .+|.-+|.+.+++. +...+- ..... + .
T Consensus 674 l~~Pg~~GaD---i~~~s~HKtf~~P~G~GGPg~G~i~vr~~--------L~~~lPg~~v~~t~d~~greq~Iga~s~~~ 742 (939)
T TIGR00461 674 LTSPGDLGAD---VCHLNLHKTFCIPHGGGGPGMGPIGVKSH--------LIPFLPKHDVVSMITGIGGSKSIGSVSAAP 742 (939)
T ss_pred CCCccccCCC---EEEecCCccCCCCCCCCCCCeEEEEEhhh--------chhhcCCCcccccccCCCCccccccccccc
Confidence 1122334444 88889999765 24566899988642 111110 00000 1 1
Q ss_pred CchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCC-Cce---EEEEecCccccCCCCCHHHH
Q 014936 284 DPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPE-GSM---AVMLKLNLSLLDDIIDDIDF 359 (415)
Q Consensus 284 ~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~-~g~---~~~~~l~~~~~~~~~~~~~~ 359 (415)
..+......+..+|.....+.+.+..+..-.+.+++.+.|++. ++ +..+. .+. -+.++++..+-....+..++
T Consensus 743 ~g~a~~~l~a~~yi~~lG~~GL~~~a~~ailnAnYl~~rL~~~--~~-~l~~~~~~~~~hEfv~~~~~~~~~~g~~~~dI 819 (939)
T TIGR00461 743 YGSASILPISWMYIKMMGNEGLPKASVVAILNANYMATRLKDH--YP-ILFVGTLKHVAHECILDLRPLKAKTGIEAIDV 819 (939)
T ss_pred cCcHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHhhcc--Cc-ccccCCCCceeEEEEEeccchhhhcCCCHHHH
Confidence 2222233444444554456788898898999999999999874 34 22332 222 13344542111111246777
Q ss_pred HHHHHhhcCeEEEcCCCCCCCCeE--EEEeeCChhhHHHHHHHHHHHHHHHHH
Q 014936 360 CFKLAKEESVIILPGTAVGLKNWL--RVTFAVDPYSLEECLDRIKSFYQRHAK 410 (415)
Q Consensus 360 ~~~ll~~~gi~v~~g~~~~~~~~i--Ri~~~~~~~~l~~~l~~l~~~~~~~~~ 410 (415)
.++|+ ++|+..-. ..|...+.+ +.+-+.++++||.+++.+.++.++..+
T Consensus 820 akrL~-d~G~hapt-~~~pv~g~lmiepTE~eskeelD~f~~al~~I~~e~~~ 870 (939)
T TIGR00461 820 AKRLQ-DYGFHAPT-LSFPVPGTLMVEPTESESLEELDRFCDAMIAIKEEINA 870 (939)
T ss_pred HHHHH-hCCeeccc-cCCccCCeEEEEeeccCCHHHHHHHHHHHHHHHHHHHH
Confidence 77764 56997432 223344544 444467899999999999888777654
No 353
>PF01276 OKR_DC_1: Orn/Lys/Arg decarboxylase, major domain; InterPro: IPR000310 Pyridoxal-dependent decarboxylases are bacterial proteins acting on ornithine, lysine, arginine and related substrates []. One of the regions of sequence similarity contains a conserved lysine residue, which is the site of attachment of the pyridoxal-phosphate group.; GO: 0003824 catalytic activity; PDB: 1C4K_A 1ORD_A 2X3L_B 3Q16_C 3N75_A 2VYC_D.
Probab=99.70 E-value=4.9e-16 Score=143.45 Aligned_cols=235 Identities=17% Similarity=0.171 Sum_probs=147.4
Q ss_pred CCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCC
Q 014936 77 AGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPD 156 (415)
Q Consensus 77 ~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~ 156 (415)
.-+.+.++.+|+.++ ..+..++++|+|.++.+++.+++++||+|+++..||-+....+...|+.+++++.. .
T Consensus 66 G~I~eAe~~aA~~fG-------Ad~t~flvnGsT~g~~a~i~a~~~~gd~VLv~RN~HkSv~~alil~ga~Pvyi~p~-~ 137 (417)
T PF01276_consen 66 GIIKEAEELAARAFG-------ADKTFFLVNGSTSGNQAMIMALCRPGDKVLVDRNCHKSVYNALILSGAIPVYIPPE-D 137 (417)
T ss_dssp THHHHHHHHHHHHHT-------ESEEEEESSHHHHHHHHHHHHHTTTTCEEEEETT--HHHHHHHHHHTEEEEEEEEE-E
T ss_pred cHHHHHHHHHHHhcC-------CCeEEEEecCchHHHHHHHHHhcCCCCEEEEcCCcHHHHHHHHHHcCCeEEEecCC-c
Confidence 346677888888873 45677899999999999999999999999999999999999999999999988754 2
Q ss_pred CCC----CCCh-----hHHHhhcCC--CceE---EEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcc-cC
Q 014936 157 KGW----EVDL-----DDIESLADQ--NTVA---LVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLV-FG 221 (415)
Q Consensus 157 ~~~----~~~~-----~~l~~~~~~--~~~~---v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~-~~ 221 (415)
+.+ .+++ +.+++++++ ..++ +++++|+. -|++ .++++|+++|+++++.|++||||+... |.
T Consensus 138 ~~~gi~~~i~~~~~~~~~i~~~l~~~p~~k~~~~vvlt~PTY-~Gv~---~di~~I~~~~h~~~~~llvDEAhGah~~F~ 213 (417)
T PF01276_consen 138 NEYGIIGGISPDEFNEEDIEEALKEHPDAKAPRLVVLTSPTY-YGVC---YDIKEIAEICHKHGIPLLVDEAHGAHFGFH 213 (417)
T ss_dssp -TTS-BEEB-GGGGSHHHHHHHHHHCTTCHCESEEEEESS-T-TSEE---E-HHHHHHHHCCTECEEEEE-TT-TTGGCS
T ss_pred cccCCccCCChhhhhHHHHHHHHHhCccccCceEEEEeCCCC-CeEE---ECHHHHHHHhcccCCEEEEEccccccccCC
Confidence 322 3455 888888764 2344 89999975 6788 578999999999999999999996544 44
Q ss_pred CCCcccccccCC----CCCeEEEccCccccCCCCce-EEEEEeeCCCCCCChHHHHHHHHhhc--cccCCchhHHHHHHH
Q 014936 222 DKPFVPMGVFGS----TVPILTLGSLSKRWIVPGWR-LGWFVTTDPCGMFRKPKVVERMKKYF--DILGDPATFIQAAVP 294 (415)
Q Consensus 222 ~~~~~~~~~~~~----~~~~i~~~s~sK~~~~~G~r-~G~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~a~~ 294 (415)
..+.+...++. +..++++.|.+|. ++++. .+++..++... . -.++++... ..+.+++.+.++.+.
T Consensus 214 -~lp~~a~~~gad~~~~~~~~vvqS~HKt--L~altQts~lh~~~~~~-v----~~~~~~~~l~~~~TTSPSY~lmASlD 285 (417)
T PF01276_consen 214 -PLPRSALALGADRPNDPGIIVVQSTHKT--LPALTQTSMLHVKGDRI-V----DHERVNEALSMHQTTSPSYPLMASLD 285 (417)
T ss_dssp -GGGTTCSSTTSS-CTSBEEEEEEEHHHH--SSS-TT-EEEEEETCCC-T----THHHHHHHHHHHS-SS--HHHHHHHH
T ss_pred -CCccchhhccCccccccceeeeechhhc--ccccccceEEEecCCCc-c----cHHHHHHHHHHHcCCChHHHHHHHHH
Confidence 22222222222 2347999999999 44544 56666665321 2 123333332 123455555444444
Q ss_pred HhhCCCcHHHHHHHHHHHHHHHHHHHHHh---hcCCCCcC
Q 014936 295 SILQQPDEVFFKKTLNLLKQSVDICYNKI---KEIPCISC 331 (415)
Q Consensus 295 ~~l~~~~~~~~~~~~~~~~~~~~~l~~~l---~~~~~~~~ 331 (415)
.+........-++..++..++.+.+++.| ++++++.+
T Consensus 286 ~a~~~m~~~~G~~l~~~~i~~a~~~R~~i~~~~~~~~~~~ 325 (417)
T PF01276_consen 286 VARAQMEEEEGRELLEEAIELAEEFRKKINRLNDIWGFKV 325 (417)
T ss_dssp HHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHCCT-SSEE
T ss_pred HHHHHHhhhhhHHHHHHHHHHHHHHHHHHHhcCCCceEec
Confidence 33322112333445555555555666666 55555553
No 354
>PRK15029 arginine decarboxylase; Provisional
Probab=99.70 E-value=1.7e-14 Score=142.88 Aligned_cols=231 Identities=10% Similarity=0.032 Sum_probs=146.5
Q ss_pred CCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCC
Q 014936 77 AGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPD 156 (415)
Q Consensus 77 ~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~ 156 (415)
.-+.+..+..|+.++ .....++++|+|.++.+++.+++++||+|+++..||-+...++...|+.++++.-..
T Consensus 205 G~I~eAq~~aA~~fg-------A~~t~FlvNGST~gn~a~i~a~~~~gd~Vlv~RN~HKSv~~al~L~ga~Pvyl~P~~- 276 (755)
T PRK15029 205 GAFGESEKYAARVFG-------ADRSWSVVVGTSGSNRTIMQACMTDNDVVVVDRNCHKSIEQGLILTGAKPVYMVPSR- 276 (755)
T ss_pred cHHHHHHHHHHHHhC-------CCcEEEEeCChhHHHHHHHHHhcCCCCEEEeecccHHHHHHHHHHcCCeEEEecccc-
Confidence 335666777777663 456789999999999999999999999999999999999999999999999886322
Q ss_pred CCC----CCC-----hhHHHhhcCCC--ce--------EEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCC
Q 014936 157 KGW----EVD-----LDDIESLADQN--TV--------ALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGH 217 (415)
Q Consensus 157 ~~~----~~~-----~~~l~~~~~~~--~~--------~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~ 217 (415)
+.+ .++ ++.++++++.. .+ ++++++|+. -|++ .++++|+++|+++++++++||||+.
T Consensus 277 ~~~Gi~~~i~~~~~~~e~i~~~l~~~p~~k~~~~~~~~avvlt~PTY-~Gv~---~di~~I~~~~h~~~~~llvDEAhGa 352 (755)
T PRK15029 277 NRYGIIGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNCTY-DGVC---YNAKEAQDLLEKTSDRLHFDEAWYG 352 (755)
T ss_pred cccCCccCCCccccCHHHHHHHHHhCchhhhccccCceEEEEECCCC-ccee---eCHHHHHHHHHhcCCeEEEECcccc
Confidence 222 233 88888887432 23 899999975 6888 4678889999999999999999965
Q ss_pred cc-cCCCCccccccc-----C-CCCCeEEEccCccccCCCCceEE-EEEeeCCCCCCChHHHHHHHHhhcc--ccCCchh
Q 014936 218 LV-FGDKPFVPMGVF-----G-STVPILTLGSLSKRWIVPGWRLG-WFVTTDPCGMFRKPKVVERMKKYFD--ILGDPAT 287 (415)
Q Consensus 218 ~~-~~~~~~~~~~~~-----~-~~~~~i~~~s~sK~~~~~G~r~G-~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 287 (415)
.. |... .+....+ . ....++++.|.+|. ++++..| ++...+...... .++++.... .+.+++.
T Consensus 353 h~~F~~~-~p~~sa~~~~~~~~~Gad~~vvqStHKt--L~alTQaS~LHv~~~~~~id----~~r~~~~l~~~qSTSPSY 425 (755)
T PRK15029 353 YARFNPI-YADHYAMRGEPGDHNGPTVFATHSTHKL--LNALSQASYIHVREGRGAIN----FSRFNQAYMMHATTSPLY 425 (755)
T ss_pred ccccCcc-ccccccccccccccCCCceEEEEchhhc--ccchhhhhhheeCCCccccC----HHHHHHHHHHHcCCCcHH
Confidence 43 4432 1111112 1 11235889999999 5555544 455533211121 134444322 1344454
Q ss_pred HHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcC
Q 014936 288 FIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEI 326 (415)
Q Consensus 288 ~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 326 (415)
+.++.+..+........-++..+...+....+++.+.++
T Consensus 426 ~LmASLD~ar~~m~~~~G~~l~~~~i~~~~~~r~~l~~~ 464 (755)
T PRK15029 426 AICASNDVAVSMMDGNSGLSLTQEVIDEAVDFRQAMARL 464 (755)
T ss_pred HHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHhc
Confidence 444333332211100123334444455555555555544
No 355
>KOG1401 consensus Acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=99.69 E-value=9.6e-15 Score=129.81 Aligned_cols=347 Identities=18% Similarity=0.138 Sum_probs=215.1
Q ss_pred ccCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcC--CCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCCh
Q 014936 32 KNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSE--KFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGC 109 (415)
Q Consensus 32 ~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~--~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~ 109 (415)
.+++.++|+..+......+ ...|++.+++.+....- ..+.|...+ .-++.+.+.+.+.+ -..+.|++.++|
T Consensus 53 ~~g~EyiD~~ssw~~~~~G-hanpev~ral~~q~~k~~hs~~~~~t~e-av~l~~~l~~~~~~-----~~~~rvff~nsG 125 (433)
T KOG1401|consen 53 PDGKEYIDFTSSWAVTILG-HANPEVARALAEQAKKLGHSSNGYFTLE-AVELEEVLSAVLGK-----GSAERVFFCNSG 125 (433)
T ss_pred CCcceeeeeccceeccccC-CCCHHHHHHHHHHHhhheeccCccccHH-HHHHHHHHHhcccC-----CCccEEEEecCC
Confidence 3588999998886433332 34799999998887652 233333322 35566666655532 277899999999
Q ss_pred HHHHHHHHHHhcCC------C--CEEEEcCCCCcchHHHHHh-CCCeEEEeeccC---C--CCCCCChhHHHhhcCCCc-
Q 014936 110 TQAIDVAMALLSRP------G--ANILLPRPGFPIYELSAAF-RHIEVRHFDLLP---D--KGWEVDLDDIESLADQNT- 174 (415)
Q Consensus 110 ~~al~~~~~~l~~~------g--d~vi~~~p~y~~~~~~~~~-~g~~~~~~~~~~---~--~~~~~~~~~l~~~~~~~~- 174 (415)
|+|++.++....+. - ..+|....+|++-...+.. .+......+.+| + ..---|.+.+++.++.+.
T Consensus 126 TeAne~ALK~Ark~~~~~~~~~~t~~Iaf~nsyHG~tlgals~~~~s~y~~~~~p~~p~v~~~~ynd~t~l~k~~~~h~~ 205 (433)
T KOG1401|consen 126 TEANETALKFARKFTGKKHPEKKTKFIAFENSYHGRTLGALSVTGNSKYGLPFDPIAPDVVTAEYNDSTALEKLFESHKG 205 (433)
T ss_pred cHHHHHHHHHHHHhhcccCCccceeEEEEecCcCCcchhHHHhhcccccCCCCCCCCCceeecccCCHHHHHHHHHhCCC
Confidence 99999999886421 1 2489999999875444322 122111121111 1 001126889999887655
Q ss_pred -eEEEecCC-CCccccC-CCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCC
Q 014936 175 -VALVIINP-GNPCGNV-YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPG 251 (415)
Q Consensus 175 -~~v~i~~p-~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G 251 (415)
.+.+|+.| +...|.+ .+++.+..|...|+++++++|.||++-++...|..-. ...+... --|.++.|. ...|
T Consensus 206 ~IaAVIvEPiqGaGG~~p~~peFl~~L~k~C~~~~vl~I~DEV~tG~gR~g~~~a-~e~~~~~---PDI~t~aK~-L~gG 280 (433)
T KOG1401|consen 206 EIAAVIVEPIQGAGGIIPADPEFLIGLRKECDDNGVLLIFDEVQTGLGRLGYGWA-QEYFGVT---PDITTVAKP-LGGG 280 (433)
T ss_pred ceEEEEEecccCCCCcccCCHHHHHHHHHHHhhcCceEEeehhhhCccccchHHH-HHHhCcC---Ccceeehhh-ccCC
Confidence 45577777 6667776 6888999999999999999999999998776654321 1122222 124467898 5677
Q ss_pred ceEEEEEeeCCCCCCChHHHHHHHHhhc----cccCCchhHHHHHHHHhhCCCc-HHHHHHHHHHHHHHHHHHHHHhhcC
Q 014936 252 WRLGWFVTTDPCGMFRKPKVVERMKKYF----DILGDPATFIQAAVPSILQQPD-EVFFKKTLNLLKQSVDICYNKIKEI 326 (415)
Q Consensus 252 ~r~G~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~a~~~~l~~~~-~~~~~~~~~~~~~~~~~l~~~l~~~ 326 (415)
+++|..++++ ++.+.+..-. ..++..++++..++...|+... .+++++..+.-+..++.+.+.+.+.
T Consensus 281 lPigA~~v~~--------kV~~~i~~~~~l~hg~Tf~gnpLacsa~~~~l~~l~~~e~~k~vs~~~k~L~~~l~e~~~~~ 352 (433)
T KOG1401|consen 281 LPIGATGVRD--------KVAEMISPGDHLYHGGTFSGNPLACSAGIKVLDELKDPETLKNVSKIGKELRKLLDEYLKKT 352 (433)
T ss_pred ceeEEEeehH--------HHHhhcCCCCccccCcccCCChhhhhHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 9999999976 6777775442 2456789999999988887644 4777777788888888888888775
Q ss_pred CCCcCCCCCCCceEEEEecCccccCCCCCHHHHHHHHHh-------hcCeEEEcCCCCCCCCeEEEEeeCChhhHHHHHH
Q 014936 327 PCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAK-------EESVIILPGTAVGLKNWLRVTFAVDPYSLEECLD 399 (415)
Q Consensus 327 ~~~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~-------~~gi~v~~g~~~~~~~~iRi~~~~~~~~l~~~l~ 399 (415)
+...+- ....++++-+.+..+... ..+.......+.. +.|+.+.|-. -+++.+++|.++.+++
T Consensus 353 ~~~i~g-~~grgl~ig~~~~~p~~~-~~d~~~~~~ll~~~~~~~~~~~gv~i~P~~--------~l~~~~~~E~i~~~l~ 422 (433)
T KOG1401|consen 353 PNSICG-GVGRGLVIGFEFEGPVYK-FADAAREQGLLILTLGKGLLEEGVRIAPIY--------LLTVEHTPEVIQRLLT 422 (433)
T ss_pred CCceee-eeeeEEEEEEEEeechhh-hhhhhhhhhHHHHHHhcccccceEEEeccc--------cccccCcHHHHHHHHH
Confidence 433211 234455554444321111 0111111111111 1133333300 1122345788888888
Q ss_pred HHHHHHHHH
Q 014936 400 RIKSFYQRH 408 (415)
Q Consensus 400 ~l~~~~~~~ 408 (415)
.+.+.+.++
T Consensus 423 i~~~~l~~~ 431 (433)
T KOG1401|consen 423 ILEKVLSAL 431 (433)
T ss_pred HHHHHHHHh
Confidence 888777654
No 356
>TIGR00699 GABAtrns_euk 4-aminobutyrate aminotransferase, eukaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=99.69 E-value=1.1e-14 Score=138.46 Aligned_cols=340 Identities=14% Similarity=0.083 Sum_probs=192.3
Q ss_pred ccCcceeEecccCCCCCCCCCCcHHHHHHHHHH-HhcCC--CCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCC
Q 014936 32 KNEKKVISLAMGDPTVHSCFHTTHVATEAVAEA-LLSEK--FNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSG 108 (415)
Q Consensus 32 ~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~-~~~~~--~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g 108 (415)
.+|+.++|+..|...... --.+|.+.++++++ ..... ...+... ...++.+.+++.+.... +...+.++++++
T Consensus 55 ~dG~~ylD~~sg~~~~~l-Gh~~p~i~~Ai~~q~~~~~l~~~~~~~~~-~~~~la~~l~~~l~~~~--p~~~~~v~f~~S 130 (464)
T TIGR00699 55 VDGNRLLDLYSQISSIPI-GYNNPALLKAAQSPEMATTLINRPALGNF-PSKDWAKILKEGILKVA--PKGQDQVWTGMS 130 (464)
T ss_pred CCCCEEEEccCCHhhhcC-CCCCHHHHHHHHHHHHHHhhcccccCCcH-HHHHHHHHHHHhHHhhC--CCCcCEEEEeCC
Confidence 357889999888633221 12579999999874 22211 1122221 12334444443222211 112368999999
Q ss_pred hHHHHHHHHHHhcC--------------------------CC---CEEEEcCCCCcchHHHHHhC-CCe-----------
Q 014936 109 CTQAIDVAMALLSR--------------------------PG---ANILLPRPGFPIYELSAAFR-HIE----------- 147 (415)
Q Consensus 109 ~~~al~~~~~~l~~--------------------------~g---d~vi~~~p~y~~~~~~~~~~-g~~----------- 147 (415)
|++|++.+++.... +| .+|+....+|++....+... +..
T Consensus 131 GsEAvE~AlKlAr~~~~~~~r~~~~~~t~~~~~~~~~~~~~g~~r~~ii~~~~syHG~t~~als~t~~~~~~~~~~~~~~ 210 (464)
T TIGR00699 131 GSDANELAFKAAFMYYRSKQRGYQADFSEEENESCMDNQAPGSPDLSILSFKGAFHGRLFGSLSTTRSKPIHKLDIPAFD 210 (464)
T ss_pred cHHHHHHHHHHHHHHHHhcCCCcccccccccccccccccccCCcCCEEEEECCCcCCccHHHHHhcCCccccccCCCCCC
Confidence 99999999998731 11 27999999999876554432 111
Q ss_pred EEEeeccCC-CCC-----------CCChhHHHhhcCC--CceEEEecCC-CCccccCC-CHHHHHHHHHHHhhcCcEEEE
Q 014936 148 VRHFDLLPD-KGW-----------EVDLDDIESLADQ--NTVALVIINP-GNPCGNVY-SYQHLQKLAETANKLKTLVIA 211 (415)
Q Consensus 148 ~~~~~~~~~-~~~-----------~~~~~~l~~~~~~--~~~~v~i~~p-~nptG~~~-~~~~l~~i~~~~~~~~~~li~ 211 (415)
+..+|.... ..+ .-+++.+++.++. ...+.++..| ....|.+. +.+.++++.++|++||+++|+
T Consensus 211 ~~~~p~p~~~~~~~~~~~~~~~~~~~~l~~l~~~l~~~~~~iAAvI~EPv~g~~G~~~~~~~yl~~lr~lc~~~g~lLI~ 290 (464)
T TIGR00699 211 WPQAPFPSLKYPLEEHVKENAKEEQRCLEEVEDLIKKWHKPVAAIIVEPIQSEGGDNHASPDFFRKLRDITKKHNVAFIV 290 (464)
T ss_pred ceecCCCCcccccccccccchhHHHHHHHHHHHHHHhcCCcEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEE
Confidence 011111100 000 0134556666642 2345566677 55567765 788999999999999999999
Q ss_pred ccccCCcccCCCCcccccccCCC--CCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHHh-hccccCCchhH
Q 014936 212 DEVYGHLVFGDKPFVPMGVFGST--VPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKK-YFDILGDPATF 288 (415)
Q Consensus 212 De~~~~~~~~~~~~~~~~~~~~~--~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 288 (415)
||++.++...|... ....++.. ..+ .+++|.++..| +++..+ ....... ....++..+++
T Consensus 291 DEV~tGfGrtG~~f-a~e~~gv~~~PDi---~t~gK~lg~gG----~~~~~~---------~~~~~~~~~~~~T~~gnp~ 353 (464)
T TIGR00699 291 DEVQTGVGATGKFW-AHEHWNLDDPPDM---VTFSKKFQTAG----YFFHDP---------AFRPNKPYRQFNTWMGDPS 353 (464)
T ss_pred eeeeeCCCCCcchh-HHHhcCCCCCCCE---EEehhhhccCC----ccccch---------hccCCCCcccccCCCCCHH
Confidence 99998876544321 11222211 222 36789964444 333321 1111111 12235677888
Q ss_pred HHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhh----cCC-CCcCCCCCCCceEEEEecCccccCCCCCHHHHHHHH
Q 014936 289 IQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIK----EIP-CISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKL 363 (415)
Q Consensus 289 ~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~----~~~-~~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~l 363 (415)
+..++.+.|+...+ ++..++.++.-+++.+.|+ ++| .+..+.....|+++-+.++.. .....+...+
T Consensus 354 ~~aaa~a~L~~l~~---~~l~~~~~~~g~~l~~~L~~l~~~~~~~i~~vRg~G~Glm~gie~~~~-----~~~~~i~~~~ 425 (464)
T TIGR00699 354 RALILREIIQEIKR---KDLLENVAHVGDYLYTGLEDLQKKYPEFIQNLRGKGRGTFIAWDTPDE-----AKRDKLLKKA 425 (464)
T ss_pred HHHHHHHHHHHHHh---cCHHHHHHHHHHHHHHHHHHHHHhCCCceeeecccCeEEEEEEecCCH-----HHHHHHHHHH
Confidence 88888877754321 1233444444444444444 344 222121114577777776421 0133455554
Q ss_pred HhhcCeEEEcCCCCCCCCeEEEEe--eCChhhHHHHHHHHHHHH
Q 014936 364 AKEESVIILPGTAVGLKNWLRVTF--AVDPYSLEECLDRIKSFY 405 (415)
Q Consensus 364 l~~~gi~v~~g~~~~~~~~iRi~~--~~~~~~l~~~l~~l~~~~ 405 (415)
.++||.+.+.. .+.|||.. ..++++++.++++|.+++
T Consensus 426 -~~~Gvl~~~~g----~~~ir~~Ppl~it~~eid~~~~~l~~~~ 464 (464)
T TIGR00699 426 -RNNGVNIGGCG----VKAIRLRPMLVFQKHHADIFLEIISKII 464 (464)
T ss_pred -HHCCcEEecCC----CCeEEEeCCCCCCHHHHHHHHHHHHHhC
Confidence 56799997641 36899998 478999999999998753
No 357
>PRK12566 glycine dehydrogenase; Provisional
Probab=99.67 E-value=9.7e-14 Score=138.72 Aligned_cols=311 Identities=14% Similarity=0.112 Sum_probs=196.5
Q ss_pred CCCCC---CCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeC-ChHHHHHHHHHHhc----C---C-CCEEEEcCCCCcchH
Q 014936 71 NGYAP---TAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTS-GCTQAIDVAMALLS----R---P-GANILLPRPGFPIYE 138 (415)
Q Consensus 71 ~~y~~---~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~-g~~~al~~~~~~l~----~---~-gd~vi~~~p~y~~~~ 138 (415)
+.|.+ ..|+.++...+.+++.+..|. +.+-+.+ +|+.+..+++.++. . + .++|+++.-.|+...
T Consensus 530 hPyqp~e~sQG~lq~i~elq~~l~eLtGm----d~~Sl~p~sGA~gE~A~Lmair~yh~~~Ge~~r~~vLIp~saHgtNp 605 (954)
T PRK12566 530 HPFAPREQAEGYRAMIDELEAWLCAITGF----DAICMQPNSGAQGEYAGLLAIRRYHRSRGQSQRDICLIPSSAHGTNP 605 (954)
T ss_pred CCCCchhhhcCHHHHHHHHHHHHHHHHCC----CeEeecCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEecccccccCH
Confidence 45555 577777777777777665553 3334444 45555545555533 1 2 257889998887766
Q ss_pred HHHHhCCCeEEEeeccCCCCCCCChhHHHhhcC---CCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEcccc
Q 014936 139 LSAAFRHIEVRHFDLLPDKGWEVDLDDIESLAD---QNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVY 215 (415)
Q Consensus 139 ~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~---~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~ 215 (415)
..+...|++++.++.++ +..+|+++|++.++ +++.+|.+++|++-++.. +++++|+++|+++|+.+++|.++
T Consensus 606 asa~~~GieVv~Vp~D~--~G~iDle~L~a~I~~~~~~laaVmiT~Pnt~Gv~e---~~V~eI~~iah~~Galv~vDgA~ 680 (954)
T PRK12566 606 ASAQMAGMRVVIVECDP--DGNVDLDDLKAKAAAAGDRLSCLMITYPSTHGVYE---EGIREICEVVHQHGGQVYMDGAN 680 (954)
T ss_pred HHHHHCCCEEEEeccCC--CCCcCHHHHHHHhhccCCCEEEEEEEecCcCceec---chHHHHHHHHHHcCCEEEEEeeC
Confidence 77888999999999864 34699999999987 577788888998755554 77999999999999999999999
Q ss_pred CCcccCCCCcccccccCCCCCeEEEccCccccCCC----CceEEEEEeeCCCCCCChHHHHHHHHhh------------c
Q 014936 216 GHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVP----GWRLGWFVTTDPCGMFRKPKVVERMKKY------------F 279 (415)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~----G~r~G~~~~~~~~~~~~~~~~~~~~~~~------------~ 279 (415)
..... .......++.+ ++.++++|+|+.| |.-+|.+.+.+ .+...+... .
T Consensus 681 ~~a~~---~l~~Pg~~GAD---i~~~s~HKtf~~P~G~GGP~vG~iav~~--------~L~pfLp~~P~~d~~G~~~r~g 746 (954)
T PRK12566 681 LNAQV---GLARPADIGAD---VSHMNLHKTFCIPHGGGGPGMGPIGVRA--------HLAPFVANHPVVPVEGPDPNNG 746 (954)
T ss_pred hhhcc---CCCChhhcCCC---EEEecCCcccCcCccCCCCccchhhhhh--------hhhhhccCCCCcCCCCCCCCCC
Confidence 64221 11122345554 8888999988532 44466655543 111111110 0
Q ss_pred cc--cCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCce---EEEEecCccc-cCCC
Q 014936 280 DI--LGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSM---AVMLKLNLSL-LDDI 353 (415)
Q Consensus 280 ~~--~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~---~~~~~l~~~~-~~~~ 353 (415)
.. ....+.....++..++.....+ +.+.......+.+++.+.|.+..++. + .+..+. -+.+++...+ ..+
T Consensus 747 a~S~~~~gsa~~l~~A~~Yi~~lG~e-Lk~aa~~ailnAnYla~rL~~~~~v~-~-~~~~~~~~hEfii~~~~l~~~~g- 822 (954)
T PRK12566 747 AVSAAPWGSASILPISWMYIAMMGPQ-LADASEVAILSANYLANQLGGAFPVL-Y-RGRNERVAHECILDLRPLKAQTG- 822 (954)
T ss_pred ceeecccchHHHHHHHHHHHHHHCHH-HHHHHHHHHHHHHHHHHHhHhhCCCC-c-CCCCCCeeeEEEEEccccccccC-
Confidence 00 1122222234444455444445 66666666778899999997643444 3 332222 1222332111 111
Q ss_pred CCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEe--eCChhhHHHHHHHHHHHHHHHHH
Q 014936 354 IDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTF--AVDPYSLEECLDRIKSFYQRHAK 410 (415)
Q Consensus 354 ~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~--~~~~~~l~~~l~~l~~~~~~~~~ 410 (415)
.+..++.++|+ ++||...- ..|...+++||+. ..++++||.+++.|..+.++..+
T Consensus 823 ~~~~dvakRL~-d~Gihapt-~~fPv~~~LmIepTE~eskeEIDrf~eAL~~I~~e~~~ 879 (954)
T PRK12566 823 ISEEDVAKRLM-DYGFHAPT-MSFPVPGTLMVEPTESESKAELDRFVEAMLSIRAEIGK 879 (954)
T ss_pred CCHHHHHHHHH-HCCcEEeE-EeeccCCEEEEEeeeeCCHHHHHHHHHHHHHHHHHHHH
Confidence 24567777776 78997543 3444478999999 57899999999999988887654
No 358
>PF01212 Beta_elim_lyase: Beta-eliminating lyase; InterPro: IPR001597 This domain is found in many tryptophanases (tryptophan indole-lyase, TNase), tyrosine phenol-lyases (TPL) and threonine aldolases. It is involved in the degradation of amino acids. The glycine cleavage system is composed of four proteins: P, T, L and H. In Bacillus subtilis, the P 'protein' is an heterodimer of two subunits. The glycine cleavage system catalyses the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; GO: 0016829 lyase activity, 0006520 cellular amino acid metabolic process; PDB: 3PJ0_C 2C44_C 2V0Y_A 2OQX_A 2V1P_A 1AX4_B 3LWS_A 1C7G_A 1V72_A 2YHK_B ....
Probab=99.66 E-value=2.3e-16 Score=140.95 Aligned_cols=247 Identities=14% Similarity=0.132 Sum_probs=160.9
Q ss_pred CcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCC
Q 014936 53 TTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRP 132 (415)
Q Consensus 53 ~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p 132 (415)
++|++.+++.+.... +- .|+......++++.+++.+ ..+..+++++||.++.++++++++|++.|++..+
T Consensus 7 ~~~~m~~a~~~a~~g-d~-~Yg~D~~~~~l~~~i~~l~--------g~e~a~f~~sGT~An~~al~~~~~~~~~vi~~~~ 76 (290)
T PF01212_consen 7 PTPAMLEAMAAANVG-DD-AYGEDPTTARLEERIAELF--------GKEAALFVPSGTMANQLALRAHLRPGESVICADT 76 (290)
T ss_dssp S-HHEEHHHHHTTSB--C-CTTSSHHHHHHHHHHHHHH--------TSSEEEEESSHHHHHHHHHHHHHHTTEEEEEETT
T ss_pred CCHHHHHHHHccccC-Cc-ccCCChhHHHHHHHHHHHc--------CCCEEEEeCCCChHHHHHHHHHHhcCCceecccc
Confidence 578899999555443 33 6888778899999999998 4567779999999999999999999999999999
Q ss_pred CCcchHH---HHHhCCCeEEEeeccCCCCCCCChhHHHhhcCC------CceEEEecCCCCc-cccCCCHHHHHHHHHHH
Q 014936 133 GFPIYEL---SAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ------NTVALVIINPGNP-CGNVYSYQHLQKLAETA 202 (415)
Q Consensus 133 ~y~~~~~---~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~------~~~~v~i~~p~np-tG~~~~~~~l~~i~~~~ 202 (415)
+|....+ .....|.++..++.. ++..+++++|++.++. +++.|.+.+|+|. .|+++|.+++++|.++|
T Consensus 77 aHi~~~E~ga~~~~~G~~~~~l~~~--~~G~l~~~~l~~~~~~~~~h~~~~~~v~le~t~~~~GG~~~s~~el~ai~~~a 154 (290)
T PF01212_consen 77 AHIHFDETGAIEELSGAKLIPLPSD--DDGKLTPEDLEAAIEEHGAHHPQPAVVSLENTTELAGGTVYSLEELRAISELA 154 (290)
T ss_dssp EHHHHSSTTHHHHHTTCEEEEEBEC--TGTBB-HHHHHHHHHHHTGTSGGEEEEEEESSBTTTTSB---HHHHHHHHHHH
T ss_pred ceeeeeccchhhHhcCcEEEECCCc--ccCCCCHHHHHHHhhhccccCCCccEEEEEecCcCCCCeeCCHHHHHHHHHHH
Confidence 8864332 335689999888753 2257999999988754 5788999999985 48999999999999999
Q ss_pred hhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhh-ccc
Q 014936 203 NKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKY-FDI 281 (415)
Q Consensus 203 ~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~-~~~ 281 (415)
++||+.+++|.+--+-...... .++..+...-.++ ..|++|.+++++ |.+++-++ ++++..... ...
T Consensus 155 ~~~gl~lhmDGARl~~a~~~~~-~~~~e~~~~~D~v-~~~~tK~~g~~~---Gavl~~~~-------~~i~~~~~~~k~~ 222 (290)
T PF01212_consen 155 REHGLPLHMDGARLANAAAALG-VSLAEIAAGADSV-SFGGTKNGGAPG---GAVLAGNK-------EFIAKARRQRKRL 222 (290)
T ss_dssp HHHT-EEEEEETTHHHHHCHHH-HHHHHHHTTSSEE-EEETTSTT-SSS---EEEEEESH-------HHHHHHHHHHHHH
T ss_pred HhCceEEEEehhhHHHhhhccc-ccHHHHhhhCCEE-EEEEEccccccc---ceEEEech-------HHHHHHHHHHHHh
Confidence 9999999999986432211000 1122222222234 447899977766 66666442 443332222 221
Q ss_pred cCCch---hHH-----HHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCC
Q 014936 282 LGDPA---TFI-----QAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPC 328 (415)
Q Consensus 282 ~~~~~---~~~-----~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~ 328 (415)
..... .+. +.++...++. ...+..+..++.+.+.+.|+.+++
T Consensus 223 gg~~~~~G~~~a~~~~~~~~l~~l~~-----~~~~~~~~~~~A~~La~~l~~~~~ 272 (290)
T PF01212_consen 223 GGGMRQAGVLAAAELYQFAALRALEL-----WLERARHANAMAKRLAAGLEALGG 272 (290)
T ss_dssp THHHHHTTHHHHHHHHHHHHHCHEEC-----SHHHHHCHHHHHHCHHHCHHEECE
T ss_pred ccCeeecceeeeechhhHHHHHHHHh-----hHHHHHHHHHHHHHHHHHHHHCCC
Confidence 11100 111 1133333443 244556666778888888888743
No 359
>PLN02974 adenosylmethionine-8-amino-7-oxononanoate transaminase
Probab=99.65 E-value=1.1e-13 Score=139.19 Aligned_cols=345 Identities=18% Similarity=0.111 Sum_probs=206.8
Q ss_pred ceeEecccCCCCCCCCC--CcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHH
Q 014936 36 KVISLAMGDPTVHSCFH--TTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAI 113 (415)
Q Consensus 36 ~~i~l~~g~~~~~~~~~--~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al 113 (415)
+++|+..+.-.. +++ .+|++.+|+.+++..-.+. .......+-...+|+.+.+..+ .-..++++++++|++|+
T Consensus 366 ~ylD~~sg~w~~--~lG~h~~p~I~~Ai~~Qa~rl~hv--~~~~~~hepa~~LAe~L~~~~~-~~~l~rVffs~sGSeAv 440 (817)
T PLN02974 366 QQFDACASWWTQ--GPDPTLQPELARAVAYAAGRYGHV--MFPENVHEPALRAAELLLGGPG-KGWASRVFFSDNGSTAI 440 (817)
T ss_pred eEEEcchhHHHh--CCCcCCCHHHHHHHHHHHhhCCcc--ccCccCCHHHHHHHHHHHhccC-CCCCCEEEECCchHHHH
Confidence 677776663111 233 4899999999998753321 1111123445556666643111 00135899999999999
Q ss_pred HHHHHHhcC-----C----------------CCEEEEcCCCCcchHHHHHhCCCe---------E------EEeecc---
Q 014936 114 DVAMALLSR-----P----------------GANILLPRPGFPIYELSAAFRHIE---------V------RHFDLL--- 154 (415)
Q Consensus 114 ~~~~~~l~~-----~----------------gd~vi~~~p~y~~~~~~~~~~g~~---------~------~~~~~~--- 154 (415)
+.+++...+ . -.+||....+|++-...+...+.. . ..++..
T Consensus 441 E~AlKmA~r~y~~~~G~~~~~~~~~~~~~~~r~kIIa~~gsYHG~T~GAms~sg~~~~~~~~~~p~~~~~~~~~~~P~~~ 520 (817)
T PLN02974 441 EVALKMAFRKFIVDHGFLENSGNEKRGGDLIELKVLALDGSYHGDTLGAMEAQAPSVFTGFLQQPWYSGRGLFLDPPTVG 520 (817)
T ss_pred HHHHHHHHHHHHHhcCCCcccccccccccCCCCEEEEECCCcCCCCHHHHhhCCchhhhcccccccccCCCcccCCCccc
Confidence 999887621 1 236999999998755544333210 0 001000
Q ss_pred ----------CCC----------CCC-----CC------------hhHHHhhcC-------CCceEEEecCC--CCcccc
Q 014936 155 ----------PDK----------GWE-----VD------------LDDIESLAD-------QNTVALVIINP--GNPCGN 188 (415)
Q Consensus 155 ----------~~~----------~~~-----~~------------~~~l~~~~~-------~~~~~v~i~~p--~nptG~ 188 (415)
+.. .|. ++ .+.+++.++ ....+.+|..| +...|+
T Consensus 521 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~f~~~r~~~~~~~~~~~~le~~l~~~~~~~~~~~iAAvI~EPviqGaGGm 600 (817)
T PLN02974 521 MRNGRWNISLPEGFSSGLEGEETTWESRDEVFDKTRDSTPLAKAYRSYIEQQLDEYEASAKNGHIAALIIEPVLHGAGGM 600 (817)
T ss_pred cccccccccCCccccccccccccccccccccccccccchhhhHHHHHHHHHHHHhhccccCCCCEEEEEEeccccCCCCc
Confidence 000 000 00 134555553 23456778888 566787
Q ss_pred C-CCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCC-ceEEEEEeeCCCCCC
Q 014936 189 V-YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPG-WRLGWFVTTDPCGMF 266 (415)
Q Consensus 189 ~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~ 266 (415)
+ .+.+.++++.++|++||+++|.||++.++...|.... ...++..+.++ +++|.+ ..| +++|.+++++
T Consensus 601 i~~~~~yl~~lr~lc~~~gilLI~DEV~TGfGRtG~~fa-~e~~gv~PDIi---~~gKgL-tgG~~Plaa~l~~~----- 670 (817)
T PLN02974 601 LLIDPLFQRALVQVCRSRKIPVIFDEVFTGLWRLGVESA-WELLGCKPDIA---CYAKLL-TGGLVPLAATLATE----- 670 (817)
T ss_pred ccCCHHHHHHHHHHHHHhCCEEEEeecccCCCcccchhh-HHhcCCCCCEE---eecccc-cCCCCccEEEEEcH-----
Confidence 6 5788899999999999999999999999887765432 22233333334 568994 567 6999999976
Q ss_pred ChHHHHHHHHh------h-ccccCCchhHHHHHHHHhhCCCcH-HHHHHHHHHHHHHHHHHHHH----hhcCCCCcCCCC
Q 014936 267 RKPKVVERMKK------Y-FDILGDPATFIQAAVPSILQQPDE-VFFKKTLNLLKQSVDICYNK----IKEIPCISCPHK 334 (415)
Q Consensus 267 ~~~~~~~~~~~------~-~~~~~~~~~~~~~a~~~~l~~~~~-~~~~~~~~~~~~~~~~l~~~----l~~~~~~~~~~~ 334 (415)
++.+.+.. + ...+++.++++.+++.+.|+...+ +..++..+..++..+++.+. +.++|.+.- .
T Consensus 671 ---~I~~~f~~~~~~~~~~hg~Ty~gnpl~cAaala~L~~~~~~~~~~~l~~~~~~l~~~l~~~l~~~l~~~p~V~~--V 745 (817)
T PLN02974 671 ---EVFEAFRGPSKLDALLHGHSYTAHPMGCAAAAKALQWYKDPSTNPNLIPPGSRLRELWDEELVRAISSLPNVER--V 745 (817)
T ss_pred ---HHHHhhccccccCCcccCCCCCcCHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHhhCCCeeE--E
Confidence 67777642 1 234678899999999888765332 22333444444444444433 444554431 3
Q ss_pred CCCceEEEEecCcccc-CCC--CCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEe--eCChhhHHHHHHHHHHHH
Q 014936 335 PEGSMAVMLKLNLSLL-DDI--IDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTF--AVDPYSLEECLDRIKSFY 405 (415)
Q Consensus 335 p~~g~~~~~~l~~~~~-~~~--~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~--~~~~~~l~~~l~~l~~~~ 405 (415)
..-|.++-+.+..... .+. .....+...++.++||.++|.. +.||+.. .+++++++++++.|.+.+
T Consensus 746 Rg~Gl~~~iel~~~~~~~~~~~~~a~~v~~~~~~~~Gl~~r~~G-----nvi~l~pP~~i~~e~l~~~~~~l~~~~ 816 (817)
T PLN02974 746 VSLGTVLALELDAEGSGSGYSSLYARSVVRRLRREDGIYARPLG-----NVVYLMCGPTTSPETCTRLLRKVYRRL 816 (817)
T ss_pred EeeeeEEEEEEecCCcccccchHHHHHHHHHHHHhCCEEEEecC-----CEEEEeCCCCCCHHHHHHHHHHHHHHh
Confidence 3456777777743211 011 0123444444327899998842 5788765 468999999999988765
No 360
>PRK12462 phosphoserine aminotransferase; Provisional
Probab=99.63 E-value=7.3e-13 Score=121.26 Aligned_cols=335 Identities=14% Similarity=0.080 Sum_probs=201.7
Q ss_pred eeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCC-----CCC-CCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChH
Q 014936 37 VISLAMGDPTVHSCFHTTHVATEAVAEALLSEKF-----NGY-APTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCT 110 (415)
Q Consensus 37 ~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~-----~~y-~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~ 110 (415)
.++|+.|- ...+++|.+++++.+.+-.. ... .-..-..++-+.+.+.+++.++++-+-+-+++..|+|
T Consensus 5 ~~nF~aGP------a~lp~~Vl~~~~~~~~~~~~~g~si~eisHRs~~F~~i~~~~~~~Lr~Ll~~P~~y~Vlfl~GggT 78 (364)
T PRK12462 5 QLNFSGGP------GALPDTVLEQVRQAVVELPETGLSVLGMSHRSSWFSSLLAQAEADLRDLLGIPDEYGVVFLQGGSS 78 (364)
T ss_pred cceecCCC------cCCCHHHHHHHHHHHhcccccCccccccccccHHHHHHHHHHHHHHHHHhCCCCCCeEEEEeccHH
Confidence 56888884 44578888888876643110 001 1112234455555555555555432333446666799
Q ss_pred HHHHHHHHHhcCCCCEEE-EcCCCCcc--hHHHHHhCCCeEEEeeccCCCC--CCCChhHHHhhcCCCceEEEecCCCCc
Q 014936 111 QAIDVAMALLSRPGANIL-LPRPGFPI--YELSAAFRHIEVRHFDLLPDKG--WEVDLDDIESLADQNTVALVIINPGNP 185 (415)
Q Consensus 111 ~al~~~~~~l~~~gd~vi-~~~p~y~~--~~~~~~~~g~~~~~~~~~~~~~--~~~~~~~l~~~~~~~~~~v~i~~p~np 185 (415)
.++.++...++.+||+++ +...++.+ +.+.++.+| ++..+......+ ..++++.+ .++++.+.|.+++-...
T Consensus 79 ~~~ea~~~Nll~~g~~~~~~~~tG~fg~r~~~ea~~~g-~v~~~~~~~~~~~~~~p~~~~~--~~~~d~~~v~~t~NETs 155 (364)
T PRK12462 79 LQFSMIPMNFSRPGAAAPEYVTTGYWSRKAIGEASRVA-AMRVVWDGAASGYRTLPSLAEL--DWDARAPFRHYVSNETV 155 (364)
T ss_pred HHHHHHHHHcCCCCCcEEEEEeCCHHHHHHHHHHHhcC-CceEecCcCCCCCCcCCCHHHh--ccCCCCcEEEEccCCCC
Confidence 999999999999999654 44444433 445666676 544443211111 23455555 23345677778887789
Q ss_pred cccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCC-
Q 014936 186 CGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCG- 264 (415)
Q Consensus 186 tG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~- 264 (415)
||+.++ ++.+.++.++|+|.+...+. .+..+..++ ++..+..|.++.|| ++.++.+++..
T Consensus 156 tGv~~~--------~~~~~~~~llvvD~sS~~~s----~pid~~~~d-----vi~agsQKnlgP~G--ltvvivs~~al~ 216 (364)
T PRK12462 156 EGLQFP--------DAAGLPDSPLIADMSSDFMS----RPFDVEAYG-----MVYAHAQKNLGPAG--VTVAIIRRALLE 216 (364)
T ss_pred ceEecC--------cccccCCCeEEEEcCchhhC----CCCChHHcc-----EEEeeccccCCCCc--eEEEEECHHHHh
Confidence 999986 22223589999999988733 333444442 56667799999888 67777754210
Q ss_pred CC--ChHHHHHHHHh--hccccCCchhHHHHHHHHhhCCCcHH--HHHHHHHHHHHHHHHHHHHhhcCCCCcCC-CCCC-
Q 014936 265 MF--RKPKVVERMKK--YFDILGDPATFIQAAVPSILQQPDEV--FFKKTLNLLKQSVDICYNKIKEIPCISCP-HKPE- 336 (415)
Q Consensus 265 ~~--~~~~~~~~~~~--~~~~~~~~~~~~~~a~~~~l~~~~~~--~~~~~~~~~~~~~~~l~~~l~~~~~~~~~-~~p~- 336 (415)
.. .-|.+.+.... ......+++....+++...|+...++ .++.+.++.++..+.+++.+++++++... ..+.
T Consensus 217 ~~~~~~p~~ldy~~~~~~~s~~nTPpv~~iy~l~~~l~~i~~e~GGl~~~~~r~~~ka~~ly~~id~~~~~~~~~~~~~~ 296 (364)
T PRK12462 217 RVPDTLPPMLDFRTHVEHRSNYNTPPVFAIYVMALVLRWIRDEIGGVHAMRDINARKAAMLYATLDALNEVIDCHAHRAA 296 (364)
T ss_pred hccccCCchhhHHHHHhcCCCCCCchHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHhCCCcccCCCChhh
Confidence 00 00112111111 11123467777778887777654445 78899999999999999999988655421 1221
Q ss_pred -CceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEe--eCChhhHHHHHHHHHHHHHH
Q 014936 337 -GSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTF--AVDPYSLEECLDRIKSFYQR 407 (415)
Q Consensus 337 -~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~--~~~~~~l~~~l~~l~~~~~~ 407 (415)
.-.-+.++++.. ..+.+|+.. +++.|+.-.-|. ...+.+|+|+ +.+.|.++.+++-++++-++
T Consensus 297 RS~mnv~f~~~~~-----~l~~~f~~~-a~~~gl~~lkGh--r~vgg~Ras~yna~~~e~v~~L~~fm~~f~~~ 362 (364)
T PRK12462 297 RSTMNVAFRFRQP-----RLDTLFKEQ-STEAGFCGLSGH--RSIGGIRASLYNAVSEQAVSRLCAFLKDFAIR 362 (364)
T ss_pred cCcceEEEEcCCH-----HHHHHHHHH-HHHCCCccccCC--cccCceEEEcCCCCCHHHHHHHHHHHHHHHHh
Confidence 223344455432 124555555 477898865554 3357799999 68888888888888777654
No 361
>PF00282 Pyridoxal_deC: Pyridoxal-dependent decarboxylase conserved domain; InterPro: IPR002129 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent decarboxylases share regions of sequence similarity, particularly in the vicinity of a conserved lysine residue, which provides the attachment site for the pyridoxal-phosphate (PLP) group [, ]. Among these enzymes are aromatic-L-amino-acid decarboxylase (L-dopa decarboxylase or tryptophan decarboxylase), which catalyses the decarboxylation of tryptophan to tryptamine []; tyrosine decarboxylase, which converts tyrosine into tyramine; and histidine decarboxylase, which catalyses the decarboxylation of histidine to histamine []. These enzymes belong to the group II decarboxylases [, ].; GO: 0016831 carboxy-lyase activity, 0030170 pyridoxal phosphate binding, 0019752 carboxylic acid metabolic process; PDB: 3MC6_A 1XEY_A 1ES0_B 2OKK_A 2JIS_B 2QMA_A 3MAF_B 3MAD_B 3MAU_A 3MBB_A ....
Probab=99.61 E-value=1.1e-13 Score=128.80 Aligned_cols=274 Identities=15% Similarity=0.160 Sum_probs=174.2
Q ss_pred HHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCC-----CCcEEEeCChHHHHHHHHHHhcC-------
Q 014936 55 HVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLT-----PNDVFVTSGCTQAIDVAMALLSR------- 122 (415)
Q Consensus 55 ~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~-----~~~i~i~~g~~~al~~~~~~l~~------- 122 (415)
.-+-+.+...++.. ...|...+...++++.+.+|+.+.+|.+.. ...-++|+|+|+++..++.+..+
T Consensus 54 ~i~~~~l~~~~n~n-~~~~~~~P~~~~~E~~vi~~l~~l~g~~~~~~~~~~~~G~~t~Ggt~anl~al~aAR~~~~~~~~ 132 (373)
T PF00282_consen 54 SILADLLASALNQN-GFTWEASPAATEIEREVIRWLADLFGLPESFTFSKDAGGVFTSGGTEANLYALLAARERALPRSK 132 (373)
T ss_dssp HHHHHHHHHHHT-B-TTSTTTSHHHHHHHHHHHHHHHHHTTGSGGTTSTTTSEEEEESSHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhhccc-ccccccccccccchHHHHHHHHHHhCCcccccccCCCceeEeccchHHHHHHHHHHHHHHhhhhh
Confidence 33444445555443 335554456789999999999998887621 24578999999999888766531
Q ss_pred -CC------CEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCC---C--ce-EEEecCCCCccccC
Q 014936 123 -PG------ANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ---N--TV-ALVIINPGNPCGNV 189 (415)
Q Consensus 123 -~g------d~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~---~--~~-~v~i~~p~nptG~~ 189 (415)
.| -.|++++-+|+++...+...|+.++.+++++ ++.+|+++|+++++. + +. .|+.+-++..+|.+
T Consensus 133 ~~~~~~~~~~~i~~s~~aH~S~~Kaa~~lGlg~~~I~~~~--~~~md~~~L~~~l~~~~~~g~~p~~vvat~Gtt~~Ga~ 210 (373)
T PF00282_consen 133 AKGVEEIPKPVIYVSEQAHYSIEKAARILGLGVRKIPTDE--DGRMDIEALEKALEKDIANGKTPFAVVATAGTTNTGAI 210 (373)
T ss_dssp HHTTTHCSSEEEEEETTS-THHHHHHHHTTSEEEEE-BBT--TSSB-HHHHHHHHHHHHHTTEEEEEEEEEBS-TTTSBB
T ss_pred hcccccccccccccccccccHHHHhcceeeeEEEEecCCc--chhhhHHHhhhhhcccccccccceeeeccCCCcccccc
Confidence 12 2577778899999999999999999999875 457999999988753 2 23 45566667889999
Q ss_pred CCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCccc-ccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCCh
Q 014936 190 YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVP-MGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRK 268 (415)
Q Consensus 190 ~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~-~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~ 268 (415)
+++.+|+++|+++|+|+++|.+|++..+-...... ...+... .-|. .+++|. +.....+|+++.+++.
T Consensus 211 ---D~l~~i~~i~~~~~~wlHVDaA~gg~~~~~~~~~~~~~gi~~a-dSit-~d~HK~-l~~P~~~~~~l~r~~~----- 279 (373)
T PF00282_consen 211 ---DPLEEIADICEKYNIWLHVDAAYGGSALLSPEYRHLLFGIERA-DSIT-IDPHKW-LGVPYGCGVLLVRDKS----- 279 (373)
T ss_dssp ----SHHHHHHHHHHCT-EEEEEETTGGGGGGHCTTGGGGTTGGGE-SEEE-EETTTT-TS-SSS-EEEEESSGG-----
T ss_pred ---cCHHHHhhhccccceeeeecccccccccccccccccccccccc-cccc-cchhhh-hcCCccceeEEeeccc-----
Confidence 99999999999999999999999984432111111 1112111 1243 478998 4566789999987743
Q ss_pred HHHHHHHHh-----------------hccccCCchh-HHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCc
Q 014936 269 PKVVERMKK-----------------YFDILGDPAT-FIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCIS 330 (415)
Q Consensus 269 ~~~~~~~~~-----------------~~~~~~~~~~-~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~ 330 (415)
.+...+.. ....+...+. .....+...|+....+.++++.++..+.++++.+.|++.+.++
T Consensus 280 -~l~~~~~~~~~Yl~~~~~~~~~~~~~~~~tl~~SR~~~alk~w~~l~~~G~~G~~~~i~~~~~~a~~l~~~l~~~~~~e 358 (373)
T PF00282_consen 280 -DLRDAFSINADYLGNDDRESDESYDYGDYTLQGSRRFRALKLWATLKSLGREGYRERIRRCIELARYLADRLRKDPRFE 358 (373)
T ss_dssp -GHHGGGEEEETCTT-S-SSS-GGGCEEEGSSSSSGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTEE
T ss_pred -chHHHhccChhhhcccccccccccccccccccccccchHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhCCCEE
Confidence 12221100 0011112222 1222222334333457889999999999999999999998888
Q ss_pred CCCCCCCceEEEEe
Q 014936 331 CPHKPEGSMAVMLK 344 (415)
Q Consensus 331 ~~~~p~~g~~~~~~ 344 (415)
++..|.-+ .+.++
T Consensus 359 l~~~~~~~-~vcFr 371 (373)
T PF00282_consen 359 LVNEPDLN-IVCFR 371 (373)
T ss_dssp ESSTTSSS-EEEEE
T ss_pred EEcCCCce-EEEEE
Confidence 55444444 44333
No 362
>PRK13578 ornithine decarboxylase; Provisional
Probab=99.61 E-value=2.9e-13 Score=132.86 Aligned_cols=167 Identities=13% Similarity=0.148 Sum_probs=118.6
Q ss_pred cHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHH-HHhCCCeEEEeeccCCC
Q 014936 79 LPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELS-AAFRHIEVRHFDLLPDK 157 (415)
Q Consensus 79 ~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~-~~~~g~~~~~~~~~~~~ 157 (415)
+.+..+..|+.++ ..+..++++|+|.++.+++.+++.+||.|+++..||-+.... +...|+.++++.... +
T Consensus 176 i~eAq~~AA~~fg-------Ad~tyFlvNGTS~gn~a~i~a~~~~Gd~VLvdRN~HKSv~hgaLiLsGa~PVYl~P~~-n 247 (720)
T PRK13578 176 AKDAQKHAAKVFN-------ADKTYFVLNGTSASNKVVTNALLTPGDLVLFDRNNHKSNHHGALIQAGATPVYLETAR-N 247 (720)
T ss_pred HHHHHHHHHHHhC-------CCceEEEeCChhHHHHHHHHHhcCCCCEEEeecccHHHHHHHHHHHcCCeEEEeeccc-c
Confidence 5566677777663 346778999999999999999999999999999999998885 889999999886432 2
Q ss_pred CC----CCCh-----hHHHhhcCCC----------ceEEEecCCCCccccCCCHHHHHHHHHH-HhhcCcEEEEccccCC
Q 014936 158 GW----EVDL-----DDIESLADQN----------TVALVIINPGNPCGNVYSYQHLQKLAET-ANKLKTLVIADEVYGH 217 (415)
Q Consensus 158 ~~----~~~~-----~~l~~~~~~~----------~~~v~i~~p~nptG~~~~~~~l~~i~~~-~~~~~~~li~De~~~~ 217 (415)
.+ .++. +.+++++++. .+++++++|+. -|++++ +++|+++ ++.++ +|++||+|+.
T Consensus 248 ~~Gi~g~I~~~~~~~~~i~~~i~~~~p~~~~~~~p~k~vvit~pTY-dG~~yd---i~~I~~~~~h~~~-~llvDEAhga 322 (720)
T PRK13578 248 PFGFIGGIDAHCFDEEYLREQIREVAPERADEARPFRLAVIQLGTY-DGTIYN---ARQVVDKIGHLCD-YILFDSAWVG 322 (720)
T ss_pred ccCCcCCCChHHccHHHHHHHHHhcCccccccccCceEEEEECCCC-cceeec---HHHHHHHhhccCC-cEEEeCcchh
Confidence 22 2354 4477777543 47889999875 688855 5667776 56777 9999999976
Q ss_pred cc-cCCC--Ccccc-cccCC-CCCeEEEccCccccCCCCceE-EEEEee
Q 014936 218 LV-FGDK--PFVPM-GVFGS-TVPILTLGSLSKRWIVPGWRL-GWFVTT 260 (415)
Q Consensus 218 ~~-~~~~--~~~~~-~~~~~-~~~~i~~~s~sK~~~~~G~r~-G~~~~~ 260 (415)
.. |... ...+. ...+. +..++++.|.+|. ++++-. +++...
T Consensus 323 h~~F~p~~~~~p~~al~~GaD~p~i~v~QStHKt--L~alTQaS~LHvk 369 (720)
T PRK13578 323 YEQFIPMMADCSPLLLELNENDPGIFVTQSVHKQ--QAGFSQTSQIHKK 369 (720)
T ss_pred hhccCcccccCChhhhhcCCCCCCeEEEEChhhc--chhhhhHhhhhcC
Confidence 54 4431 11111 12233 3457999999999 455544 445553
No 363
>PRK05367 glycine dehydrogenase; Provisional
Probab=99.57 E-value=3.2e-12 Score=130.99 Aligned_cols=271 Identities=14% Similarity=0.090 Sum_probs=175.6
Q ss_pred cHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhc-CC--CCEEEEcCCCCcchHHH----HHhCCCeEEEe
Q 014936 79 LPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLS-RP--GANILLPRPGFPIYELS----AAFRHIEVRHF 151 (415)
Q Consensus 79 ~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~-~~--gd~vi~~~p~y~~~~~~----~~~~g~~~~~~ 151 (415)
+.++++.++++. ++++.++-+..++|++.+.++.++. .+ +++|++++..|+..... ++..|++++.+
T Consensus 123 l~~~Qt~la~Lt------G~~~anaSl~d~aTAa~ea~~~a~~~~~~~~~~vlv~~~~hP~~~~v~~t~a~~~G~ev~~~ 196 (954)
T PRK05367 123 LLNFQTMVADLT------GLEIANASLLDEATAAAEAMALAKRVSKSKSNRFFVDDDVHPQTLDVLRTRAEPLGIEVVVG 196 (954)
T ss_pred HHHHHHHHHHHH------CCChhhccccccHHHHHHHHHHhhhhccCCCCEEEEcCccCHHHHHHHHHHHHhCCCEEEEe
Confidence 445666777776 6788999999999999998887763 34 48999999999986654 46689999988
Q ss_pred eccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCccccccc
Q 014936 152 DLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVF 231 (415)
Q Consensus 152 ~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~ 231 (415)
+... +++ .+++..+++.+| |-+|.+ .++++|+++|+++|+++++|..+..+... .+...+
T Consensus 197 ~~~~------d~~------~~~~~~vlvq~p-~~~G~i---~d~~~i~~~ah~~Gal~~vda~~~Al~~l----~~pge~ 256 (954)
T PRK05367 197 DAAK------ALD------HDDVFGVLLQYP-GTSGEV---RDYTALIAAAHARGALVAVAADLLALTLL----TPPGEM 256 (954)
T ss_pred cCcc------CCC------cccEEEEEEecC-CCCeee---ccHHHHHHHHHHcCCEEEEEehhhhccCC----CChhhc
Confidence 7632 111 224445556666 459999 56999999999999999999866332211 123455
Q ss_pred CCCCCeEEEccCccc-----cCCCCceEEEEEeeCCCCCCChHHHHHHHHhh-------------------------ccc
Q 014936 232 GSTVPILTLGSLSKR-----WIVPGWRLGWFVTTDPCGMFRKPKVVERMKKY-------------------------FDI 281 (415)
Q Consensus 232 ~~~~~~i~~~s~sK~-----~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~-------------------------~~~ 281 (415)
+.+ +++++..|+ ||.|| .|++.+++ ++.+.+.-. ..-
T Consensus 257 GaD---i~vgs~qkfg~P~g~GGP~--aGflavr~--------~~~r~lpgrivG~s~d~~g~~~~~lalqtReqhiRre 323 (954)
T PRK05367 257 GAD---IAVGSAQRFGVPMGFGGPH--AAYFAVRD--------AYKRSMPGRIVGVSVDAAGNPALRLALQTREQHIRRE 323 (954)
T ss_pred CCC---EEEeeCcccCCCCCCCCCC--EEEEEECH--------HHHhhCCCCeeeeecccCCCccccccccccccccccc
Confidence 555 888899997 55555 89988865 222222100 000
Q ss_pred cCCchhH---HHHHHHH--hhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCccccCCCCCH
Q 014936 282 LGDPATF---IQAAVPS--ILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLDDIIDD 356 (415)
Q Consensus 282 ~~~~~~~---~~~a~~~--~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~~~~~~~ 356 (415)
..+.|.- ...++.+ ++..+....+++..++...+..++.+.|+.. |++.. .+.-...+.++++ .+.
T Consensus 324 kaTsNict~qaL~a~~a~~y~~~~g~~Gl~~Ia~~~~~la~~l~~~L~~~-G~~~~-~~~~f~~~~~~~~-------~~~ 394 (954)
T PRK05367 324 KATSNICTAQVLLAVMASMYAVYHGPEGLKAIARRVHRLAAILAAGLRAL-GLEVV-HDSFFDTLTVEVG-------GDA 394 (954)
T ss_pred ccccccchHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhc-CcccC-CCCCCCeEEEeCC-------CCH
Confidence 0111111 1111111 1222334678888899999999999999874 77732 2211112223332 145
Q ss_pred HHHHHHHHhhcCeEEEcCCCCCCCCeEEEEe--eCChhhHHHHHHHHH
Q 014936 357 IDFCFKLAKEESVIILPGTAVGLKNWLRVTF--AVDPYSLEECLDRIK 402 (415)
Q Consensus 357 ~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~--~~~~~~l~~~l~~l~ 402 (415)
.++.+++ .++||.+..- ..+.+|+|+ .+++++|+.+++.|.
T Consensus 395 ~~i~~~l-~~~gi~~~~~----~~~~l~is~~e~~t~~did~l~~~l~ 437 (954)
T PRK05367 395 AAVLARA-LAAGINLRRV----DDDHVGISLDETTTREDLAALLAVFG 437 (954)
T ss_pred HHHHHHH-HHCCceeccc----cCCEEEEEecccCCHHHHHHHHHHHc
Confidence 6666666 5669987322 146899999 468899999999997
No 364
>TIGR02617 tnaA_trp_ase tryptophanase, leader peptide-associated. Members of this family belong to the beta-eliminating lyase family (pfam01212) and act as tryptophanase (L-tryptophan indole-lyase). The tryptophanases of this family, as a rule, are found with a tryptophanase leader peptide (TnaC) encoded upstream. Both tryptophanases (4.1.99.1) and tyrosine phenol-lyases (EC 4.1.99.2) are found between trusted and noise cutoffs, but this model captures nearly all tryptophanases for which the leader peptide gene tnaC can be found upstream.
Probab=99.57 E-value=3.4e-12 Score=117.36 Aligned_cols=341 Identities=16% Similarity=0.134 Sum_probs=210.7
Q ss_pred CcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHH
Q 014936 34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAI 113 (415)
Q Consensus 34 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al 113 (415)
+.=+|||-+..-+ -.+.++.++++.. ++ -.|........|++.+++.+ ..+.++.|+.++.+-
T Consensus 40 ~dV~IDLrSDTgT----~apS~~m~aAM~~----GD-D~Y~gdpSv~~Lee~vael~--------G~E~alpthqGRgaE 102 (467)
T TIGR02617 40 EDVFIDLLTDSGT----GAVTQSMQAAMMR----GD-EAYSGSRSYYALAESVKNIF--------GYQYTIPTHQGRGAE 102 (467)
T ss_pred CCeEEECccCCCC----CCCCHHHHHHHHc----CC-cccccCchHHHHHHHHHHHh--------CCceEEECCCCchHH
Confidence 3345777776522 1357778887775 23 25776677899999999998 456788999999999
Q ss_pred HHHHHHhcC-CCCEEEEcCC-------CCcc-hHHHHHhCCCeEEEeecc--------CCCCCCCChhHHHhhcCCC---
Q 014936 114 DVAMALLSR-PGANILLPRP-------GFPI-YELSAAFRHIEVRHFDLL--------PDKGWEVDLDDIESLADQN--- 173 (415)
Q Consensus 114 ~~~~~~l~~-~gd~vi~~~p-------~y~~-~~~~~~~~g~~~~~~~~~--------~~~~~~~~~~~l~~~~~~~--- 173 (415)
.++++.+++ +|+.+++..+ .|+. ....+...|+.+..++.+ ......+|+++|++++++.
T Consensus 103 ~Il~~~~~~~~g~e~g~~~~~~~v~hn~~fett~g~a~l~G~~~~~l~~~ea~~~~~~~~fkG~~dl~~le~~I~~~g~~ 182 (467)
T TIGR02617 103 QIYIPVLIKKREQEKGLDRSKMVAFSNYFFDTTQGHSQINGCTARNVYTKEAFDTGVRYDFKGNFDLEGLERGIEEVGPN 182 (467)
T ss_pred HHHHHhhcccccccccccccccccceEEEEecchHHHHHcCceeecccchhhcccccCCCCCCCcCHHHHHHHHhhcCCC
Confidence 999999988 7887776554 2222 234566778877665321 1223468999999998742
Q ss_pred -ceEEEecCCCC-ccccCCCHHHHHHHHHHHhhcCcEEEEccccCCc-c---------cCCCCccccc-ccCCCCCeEEE
Q 014936 174 -TVALVIINPGN-PCGNVYSYQHLQKLAETANKLKTLVIADEVYGHL-V---------FGDKPFVPMG-VFGSTVPILTL 240 (415)
Q Consensus 174 -~~~v~i~~p~n-ptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~-~---------~~~~~~~~~~-~~~~~~~~i~~ 240 (415)
...+...-.+| -.|+++|.+.++++.++|++||+.++.|.+--+- . +.+.....+. .+...-. .+.
T Consensus 183 ~i~~v~~tlt~N~~GGqpvslenlr~V~~la~~~GIplhLDgARl~nNA~fIk~rE~~a~~~si~eI~rE~~~~aD-svt 261 (467)
T TIGR02617 183 NVPYIVATITCNSAGGQPVSLANLKAVYEIAKKYDIPVVMDSARFAENAYFIKQREAEYKNWSIEQITRETYKYAD-MLA 261 (467)
T ss_pred CceeeeeeEEEecCCCEEeCHHHHHHHHHHHHHcCCcEEEEhHHHHHHhhhhhhcchhhcCCCHHHHHHHhhccCC-EEE
Confidence 11221111123 4689999999999999999999999999976441 1 2222222111 0011111 344
Q ss_pred ccCccccCCC-CceEEEEEeeCCCCCCChHHHHHHHHhhc------cccCCchhHHHHHHHHhhCCCc-HHHHHHHHHHH
Q 014936 241 GSLSKRWIVP-GWRLGWFVTTDPCGMFRKPKVVERMKKYF------DILGDPATFIQAAVPSILQQPD-EVFFKKTLNLL 312 (415)
Q Consensus 241 ~s~sK~~~~~-G~r~G~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~a~~~~l~~~~-~~~~~~~~~~~ 312 (415)
.|+||.+++| | |+++++++. +. ++.++.+... .+.++.+.-.+.|++.-|.+.. ++++..+..
T Consensus 262 ~slsKglgApvG---g~Lag~d~~-~~---~l~~~~~~~~i~~EGf~tYGGlagrd~ea~a~Gl~e~~~~~yl~~ri~-- 332 (467)
T TIGR02617 262 MSAKKDAMVPMG---GLLCFKDDS-FF---DVYTECRTLCVVQEGFPTYGGLEGGAMERLAVGLYDGMNLDWLAYRIN-- 332 (467)
T ss_pred EEcCCCCCCccc---ceEEecchh-HH---HHHHHHHhhcccccCCcCcCchhHHHHHHHHhhhhhcccHHHHHHHHH--
Confidence 5899998766 3 555554421 11 3444444421 1234556566667766666532 355555544
Q ss_pred HHHHHHHHHHhhcCCCCcCCCCCCCceEEEEec----CccccCCCCCHHHHHHHHHhhcCeEE-EcCCCC-CC-------
Q 014936 313 KQSVDICYNKIKEIPCISCPHKPEGSMAVMLKL----NLSLLDDIIDDIDFCFKLAKEESVII-LPGTAV-GL------- 379 (415)
Q Consensus 313 ~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l----~~~~~~~~~~~~~~~~~ll~~~gi~v-~~g~~~-~~------- 379 (415)
..++|.+.|.+. |+.++ . .+|.-++++- |.-+.... ....+..+|-.+.||-. .-|+.. +.
T Consensus 333 --qv~yl~~~L~~~-Gvpi~-~-~Gghav~iDa~~~lphip~~~f-pa~al~~~ly~~~GiR~~e~G~~~~~rd~~~~~~ 406 (467)
T TIGR02617 333 --QVQYLVNGLEEI-GVVCQ-Q-AGGHAAFVDAGKLLPHIPADQF-PAHALACELYKVAGIRAVEIGSLLLGRDPKTGKQ 406 (467)
T ss_pred --HHHHHHHHHHhC-CCcEE-e-cCccEEEEehhhhCCCCChhhC-cHHHHHHHHHHHcCcceEeecceecccCCCCCcc
Confidence 445666666666 77743 5 7777776642 11111111 36677777777888863 334431 11
Q ss_pred ----CCeEEEEee---CChhhHHHHHHHHHHHHHH
Q 014936 380 ----KNWLRVTFA---VDPYSLEECLDRIKSFYQR 407 (415)
Q Consensus 380 ----~~~iRi~~~---~~~~~l~~~l~~l~~~~~~ 407 (415)
-.-+|+++. .+.+.++...++|..+.++
T Consensus 407 ~~~~~el~RlaipRrvyt~~h~d~v~~~~~~~~~~ 441 (467)
T TIGR02617 407 LPCPAELLRLTIPRATYTQTHMDFIIEAFKHVKEN 441 (467)
T ss_pred CCCccceeeeccccccccHhHHHHHHHHHHHHHhh
Confidence 146999993 5889999999999988775
No 365
>PRK15400 lysine decarboxylase CadA; Provisional
Probab=99.57 E-value=1.1e-12 Score=128.61 Aligned_cols=297 Identities=13% Similarity=0.082 Sum_probs=175.4
Q ss_pred cHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCC
Q 014936 79 LPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKG 158 (415)
Q Consensus 79 ~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~ 158 (415)
+.+..+.+|+.++ .....++++|+|.++.+++.+++.+||.|+++..||-+...++...|+.++++.... +.
T Consensus 197 i~eAe~~AA~~fg-------Ad~tyfvvNGTS~~n~av~~a~~~~Gd~VLvdRN~HKSv~haLilsga~PVYl~P~r-n~ 268 (714)
T PRK15400 197 HKEAEEYIARVFN-------ADRSYMVTNGTSTANKIVGMYSAPAGSTVLIDRNCHKSLTHLMMMSDVTPIYFRPTR-NA 268 (714)
T ss_pred HHHHHHHHHHHhC-------CCcEEEEeCchHHHHHHHHHHhcCCCCEEEeecccHHHHHHHHHHcCCeEEEecccc-cc
Confidence 4566777777663 345778999999999999999999999999999999999999999999999986432 22
Q ss_pred C----CCC-----hhHHHhhcCCCc--e---EEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcc-cCCC
Q 014936 159 W----EVD-----LDDIESLADQNT--V---ALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLV-FGDK 223 (415)
Q Consensus 159 ~----~~~-----~~~l~~~~~~~~--~---~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~-~~~~ 223 (415)
+ .++ .+.+++++...+ + .+++++|+ --|.+++ +++|++.|+.++ +++||||+... |...
T Consensus 269 ~Gi~g~I~~~~~~~e~i~~~i~~~p~ak~p~~~vit~pT-YdG~~yd---~~~I~~~~~~~~--ilvDEAwgah~~F~p~ 342 (714)
T PRK15400 269 YGILGGIPQSEFQHATIAKRVKETPNATWPVHAVITNST-YDGLLYN---TDFIKKTLDVKS--IHFDSAWVPYTNFSPI 342 (714)
T ss_pred cCCccCCCccccCHHHHHHHHHhCccccCccEEEEECCC-CccEecC---HHHHHHHhCCCC--EEEEccchhhhccCcc
Confidence 2 234 788888876432 2 68888885 4788865 566677777776 78999997654 4432
Q ss_pred C--ccccccc-CCCCCeEEEccCccccCCCCceEEE-EEeeCCCCCCChHHHHHHHHhhcc--ccCCchhHHHHHHH---
Q 014936 224 P--FVPMGVF-GSTVPILTLGSLSKRWIVPGWRLGW-FVTTDPCGMFRKPKVVERMKKYFD--ILGDPATFIQAAVP--- 294 (415)
Q Consensus 224 ~--~~~~~~~-~~~~~~i~~~s~sK~~~~~G~r~G~-~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~a~~--- 294 (415)
- ..++... +.++.++++.|.+|. ++|+.-+. +...+ . .+ .++++.... .+.+++.+..+.+.
T Consensus 343 ~~~~sam~~ga~~~~~i~vtQStHKt--L~alTQaS~LHvkg--~-vd----~~~~n~a~~m~~STSPsY~l~ASLD~a~ 413 (714)
T PRK15400 343 YEGKCGMSGGRVEGKVIYETQSTHKL--LAAFSQASMIHVKG--D-VN----EETFNEAYMMHTTTSPHYGIVASTETAA 413 (714)
T ss_pred cCCcChhhcCCCCCCceEEEEchhhc--ccchhHHhHHHHcC--C-CC----HHHHHHHHHHHcCCCcHHHHHHHHHHHH
Confidence 1 1222211 112456999999999 45554443 43322 1 11 133433322 12344444333222
Q ss_pred HhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCC------CcCCCCCC-------------Cce----------E-----
Q 014936 295 SILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPC------ISCPHKPE-------------GSM----------A----- 340 (415)
Q Consensus 295 ~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~------~~~~~~p~-------------~g~----------~----- 340 (415)
+.++. ..-++..+...+....+++.|.++++ +.++ .|. ..+ +
T Consensus 414 ~~m~~---~~G~~l~~~~i~~a~~~R~~l~~~~~~~~~w~~~~~-~~~~~~~~~~w~~~p~~~whgf~~~~~~~~~lDP~ 489 (714)
T PRK15400 414 AMMKG---NAGKRLINGSIERAIKFRKEIKRLRTESDGWFFDVW-QPDHIDTTECWPLRSDSTWHGFKNIDNEHMYLDPI 489 (714)
T ss_pred HHHHh---hhhHHHHHHHHHHHHHHHHHHHhCCCcccCceEEec-ChhhcccchhcccCccccccCcccccccccccCCc
Confidence 23331 12334444555555555666655544 3322 111 000 0
Q ss_pred -EEEecCcccc------CCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEeeCChhhHHHHHHHHHHHHH
Q 014936 341 -VMLKLNLSLL------DDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFAVDPYSLEECLDRIKSFYQ 406 (415)
Q Consensus 341 -~~~~l~~~~~------~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~~~l~~~l~~l~~~~~ 406 (415)
+.+..+.-.. .|. .+.. +...|+++||.+.-.+.+. --+-++++.++++++.+++.|.++-+
T Consensus 490 Klti~tpgi~~~g~~~~~Gi-pg~~-v~~~L~e~gI~~E~~d~~~--iLfl~s~g~t~~~~~~L~~aL~~f~~ 558 (714)
T PRK15400 490 KVTLLTPGMKKDGTMSDFGI-PASI-VAKYLDEHGIVVEKTGPYN--LLFLFSIGIDKTKALSLLRALTDFKR 558 (714)
T ss_pred eEEEEeCCCCCCccccccCC-CHHH-HHHHHHHcCCEEEecCCCe--EEEEeCCCCCHHHHHHHHHHHHHHHH
Confidence 1111111000 011 2334 4445588899987654311 12344446788999988888887644
No 366
>PRK15399 lysine decarboxylase LdcC; Provisional
Probab=99.55 E-value=9.1e-12 Score=122.37 Aligned_cols=165 Identities=15% Similarity=0.082 Sum_probs=115.1
Q ss_pred cHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCC
Q 014936 79 LPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKG 158 (415)
Q Consensus 79 ~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~ 158 (415)
+.+..+.+|+.++ .....++++|+|.++.+++.+++.+||.|+++..||-+...++...|+.++++.... +.
T Consensus 197 i~eAe~~aA~~fg-------Ad~tyfvvNGTS~~n~av~~a~~~~Gd~VLvdRN~HKSv~~aLilsga~PVYl~P~~-n~ 268 (713)
T PRK15399 197 HLEAEEYIARTFG-------AEQSYIVTNGTSTSNKIVGMYAAPAGSTLLIDRNCHKSLAHLLMMSDVVPIWLKPTR-NA 268 (713)
T ss_pred HHHHHHHHHHHhC-------CCcEEEEeCChHHHHHHHHHHhcCCCCEEEeecccHHHHHHHHHHcCCeeEEecccc-cc
Confidence 4566677777663 345778999999999999999999999999999999999999999999999986322 22
Q ss_pred C----CCCh-----hHHHhhcCCC-----ceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEE-EEccccCCcc-cCC
Q 014936 159 W----EVDL-----DDIESLADQN-----TVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLV-IADEVYGHLV-FGD 222 (415)
Q Consensus 159 ~----~~~~-----~~l~~~~~~~-----~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~l-i~De~~~~~~-~~~ 222 (415)
+ .++. +.+++++++. ++++++++|+ --|.+++.+ +|++.| |+.+ ++||+|+... |..
T Consensus 269 ~Gi~g~I~~~~~~~e~I~~~i~~~p~~~~p~~vvit~pT-YdGi~yd~~---~I~~~~---g~~~ilvDEAhgah~~F~p 341 (713)
T PRK15399 269 LGILGGIPRREFTRDSIEEKVAATTQAQWPVHAVITNST-YDGLLYNTD---WIKQTL---DVPSIHFDSAWVPYTHFHP 341 (713)
T ss_pred cCCcCCCChhhccHHHHHHHHHhCCCcCCceEEEEECCC-CCceeeCHH---HHHHHh---CCCEEEEeccchhhhhcCc
Confidence 2 2344 8888877542 3578899985 478997654 455555 4555 6999997654 433
Q ss_pred CC--ccccccc-CCCCCeEEEccCccccCCCCceE-EEEEee
Q 014936 223 KP--FVPMGVF-GSTVPILTLGSLSKRWIVPGWRL-GWFVTT 260 (415)
Q Consensus 223 ~~--~~~~~~~-~~~~~~i~~~s~sK~~~~~G~r~-G~~~~~ 260 (415)
.- ..++... +.+..++++.|.+|. ++|+.- +++..+
T Consensus 342 ~~~~~sam~~~~~aD~~i~~tQStHKt--L~alTQaS~iHvk 381 (713)
T PRK15399 342 IYQGKSGMSGERVPGKVIFETQSTHKM--LAAFSQASLIHIK 381 (713)
T ss_pred ccCCcChhhCCCCCCeeeeeeeehhcc--ccccchheeeeec
Confidence 11 1222221 223345678999999 455544 455553
No 367
>PF00202 Aminotran_3: Aminotransferase class-III; InterPro: IPR005814 Aminotransferases share certain mechanistic features with other pyridoxalphosphate-dependent enzymes, such as the covalent binding of the pyridoxalphosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. One of these, called class-III, includes acetylornithine aminotransferase (2.6.1.11 from EC), which catalyzes the transfer of an amino group from acetylornithine to alpha-ketoglutarate, yielding N-acetyl-glutamic-5-semi-aldehyde and glutamic acid; ornithine aminotransferase (2.6.1.13 from EC), which catalyzes the transfer of an amino group from ornithine to alpha-ketoglutarate, yielding glutamic-5-semi-aldehyde and glutamic acid; omega-amino acid--pyruvate aminotransferase (2.6.1.18 from EC), which catalyzes transamination between a variety of omega-amino acids, mono- and diamines, and pyruvate; 4-aminobutyrate aminotransferase (2.6.1.19 from EC) (GABA transaminase), which catalyzes the transfer of an amino group from GABA to alpha-ketoglutarate, yielding succinate semialdehyde and glutamic acid; DAPA aminotransferase (2.6.1.62 from EC), a bacterial enzyme (bioA), which catalyzes an intermediate step in the biosynthesis of biotin, the transamination of 7-keto-8-aminopelargonic acid to form 7,8-diaminopelargonic acid; 2,2-dialkylglycine decarboxylase (4.1.1.64 from EC), a Burkholderia cepacia (Pseudomonas cepacia) enzyme (dgdA) that catalyzes the decarboxylating amino transfer of 2,2-dialkylglycine and pyruvate to dialkyl ketone, alanine and carbon dioxide; glutamate-1-semialdehyde aminotransferase (5.4.3.8 from EC) (GSA); Bacillus subtilis aminotransferases yhxA and yodT; Haemophilus influenzae aminotransferase HI0949; and Caenorhabditis elegans aminotransferase T01B11.2.; GO: 0008483 transaminase activity, 0030170 pyridoxal phosphate binding; PDB: 2JJE_A 2CJH_A 2CIN_A 2JJH_A 2JJF_A 2JJG_A 2CJG_A 2CJD_A 3BS8_A 2YKX_C ....
Probab=99.54 E-value=1.8e-13 Score=126.42 Aligned_cols=283 Identities=19% Similarity=0.199 Sum_probs=171.0
Q ss_pred ccCcceeEecccCCCCCCCCC-CcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChH
Q 014936 32 KNEKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCT 110 (415)
Q Consensus 32 ~~~~~~i~l~~g~~~~~~~~~-~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~ 110 (415)
.+++.++||..+.-... ++ .+|.+.+++++++...... .......+....+++.+.+..+ -..++++++++++
T Consensus 13 ~dG~~~lD~~~~~~~~~--lGh~~p~i~~ai~~~~~~~~~~--~~~~~~~~~~~~la~~L~~~~p--~~~~~v~f~~sGs 86 (339)
T PF00202_consen 13 VDGREYLDFMSGYGSVN--LGHNHPEIAEAIAEQANKLNYV--SFSGFTHPEAAELAEKLAELFP--GGLDRVFFANSGS 86 (339)
T ss_dssp TTSEEEEESSHHHHTTT--T-BT-HHHHHHHHHHHHHCSSC--STTTSEEHHHHHHHHHHHHHSS--TTEEEEEEESSHH
T ss_pred CCCCEEEECCCCcccee--cCCCccccchhHHHHhhhcccc--cccceeccchhhhhhhhhhccc--cccceeeeccCch
Confidence 45889999987642211 22 4689999999988754321 1122334556666666665443 2457999999999
Q ss_pred HHHHHHHHHhc-------CCC-CEEEEcCCCCcchHHHHHhCC-------------CeEEEeeccCCCCCCCChhH----
Q 014936 111 QAIDVAMALLS-------RPG-ANILLPRPGFPIYELSAAFRH-------------IEVRHFDLLPDKGWEVDLDD---- 165 (415)
Q Consensus 111 ~al~~~~~~l~-------~~g-d~vi~~~p~y~~~~~~~~~~g-------------~~~~~~~~~~~~~~~~~~~~---- 165 (415)
+|++.+++... .++ .+|+....+|++....+...+ ..+..+|.+ ++..
T Consensus 87 eAve~Alkla~~~~~~~~~~~r~~il~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~p~~-------~~~~~~~~ 159 (339)
T PF00202_consen 87 EAVEAALKLARQYHNKRAYTGRRKILAFEGSYHGRTLGALSLTGNPPYRKGFGPLYPGVVFVPFP-------DPAADEEE 159 (339)
T ss_dssp HHHHHHHHHHHHHHHHTHHHTTTEEEEETTTB-TSSHHHHHHSSSTHHHTTTCSSSTTEEEEETT-------CHHHHHHH
T ss_pred HHHHHHHHHhhcccccccccCCceEEEeeeeeeccCcccccccCCccccccccccccccccccCC-------ccchhhhH
Confidence 99999999876 122 689999999987554333211 122334431 2222
Q ss_pred ------HHhh---cCCCceEEEecCC-CCccccC-CCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCC
Q 014936 166 ------IESL---ADQNTVALVIINP-GNPCGNV-YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGST 234 (415)
Q Consensus 166 ------l~~~---~~~~~~~v~i~~p-~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~ 234 (415)
+++. ......+.+|..| +...|.. ++.+.+++|.++|++||+++|.||++.++...|... ....++..
T Consensus 160 ~~~~~~~~~~~~~~~~~~iaavivEPi~g~~G~~~~~~~~l~~l~~lc~~~gillI~DEV~tG~gRtG~~~-a~~~~gv~ 238 (339)
T PF00202_consen 160 QACLNALEELIAALNADEIAAVIVEPIQGEGGMIPPPPEYLRELRELCREHGILLIADEVQTGFGRTGKFF-ASEHYGVD 238 (339)
T ss_dssp HHHHHHHHHHHHHHHGGGEEEEEEESSBTTTTSBEE-TTHHHHHHHHHHHTT-EEEEEETTTTTTTTSSSS-GHHHHTSS
T ss_pred HHHHHHHHHHHHhhcCCcEEEEEEeccccccCccccccchhhehcccccccccceecccccccccccCCcc-ceeccccc
Confidence 2222 2234456677777 4445554 678899999999999999999999999987666533 22333333
Q ss_pred CCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhh-ccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHH
Q 014936 235 VPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKY-FDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLK 313 (415)
Q Consensus 235 ~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~ 313 (415)
+.++ +++|.+ ..|+.+|.+++++ ++.+.+... ...++..++++..++.+.|+...++ +..++.+
T Consensus 239 PDiv---~~gK~l-~gG~p~sav~~~~--------~i~~~~~~~~~~~T~~g~p~~~aaa~~~l~~~~~~---~~~~~~~ 303 (339)
T PF00202_consen 239 PDIV---TFGKGL-GGGLPISAVLGSE--------EIMEAFQPGSHGSTFGGNPLSCAAALATLEILEEE---DLLERVR 303 (339)
T ss_dssp SSEE---EEEGGG-GTTSSEEEEEEEH--------HHHTTSCTTSSTCTTTT-HHHHHHHHHHHHHHHHT---THHHHHH
T ss_pred Cccc---ccccch-hhhhhcccccccc--------hhhccccccccccccccchHhhhhhhhHHHhhccH---HHHHHHH
Confidence 3344 457995 4569999999976 566655433 2345667889998888888653221 2334444
Q ss_pred HHHHHHHHHhhc----CCCCcCCCCCCCceEEEEec
Q 014936 314 QSVDICYNKIKE----IPCISCPHKPEGSMAVMLKL 345 (415)
Q Consensus 314 ~~~~~l~~~l~~----~~~~~~~~~p~~g~~~~~~l 345 (415)
+.-+++.+.|++ .+.+. . ...-|+++-+++
T Consensus 304 ~~g~~l~~~L~~l~~~~~~i~-~-vrg~Gl~~~ie~ 337 (339)
T PF00202_consen 304 ELGERLREGLRELAARYPLIG-E-VRGIGLMIGIEL 337 (339)
T ss_dssp HHHHHHHHHHHHHHHHTTTEE-E-EEEETTEEEEEE
T ss_pred HHHHHHHHHHHHHHHhCCCeE-E-EeeeCeEEEEEE
Confidence 444444444443 23332 1 334466665555
No 368
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=99.51 E-value=2e-11 Score=124.73 Aligned_cols=299 Identities=13% Similarity=0.079 Sum_probs=185.7
Q ss_pred CCcHHHHHHHHHHHhcCCCCCCCCCC-----C----cHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhc-
Q 014936 52 HTTHVATEAVAEALLSEKFNGYAPTA-----G----LPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLS- 121 (415)
Q Consensus 52 ~~~~~~~~a~~~~~~~~~~~~y~~~~-----g----~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~- 121 (415)
..++.+.+++.+... .+..|+|.. | +.+++..|++++ +++++++-++.++|++.++++.++.
T Consensus 116 ~~P~~v~~~i~~~~~--~~TaytPYqaEisQG~lqal~~~Qt~ia~Lt------G~~~anaSL~d~aTAaaea~~~a~~~ 187 (993)
T PLN02414 116 HVPPVILRNILENPG--WYTQYTPYQAEIAQGRLESLLNYQTMITDLT------GLPMSNASLLDEGTAAAEAMAMCNNI 187 (993)
T ss_pred cCCHHHHHHHHhChH--HHhhcCCCchHHHHHHHHHHHHHHHHHHHHh------CCChhhEeecCChHHHHHHHHHHHhc
Confidence 456666677766443 223444321 2 456777788887 6889999999999999998887763
Q ss_pred CC--CCEEEEcCCCCcchHHHH----HhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHH
Q 014936 122 RP--GANILLPRPGFPIYELSA----AFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHL 195 (415)
Q Consensus 122 ~~--gd~vi~~~p~y~~~~~~~----~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l 195 (415)
.+ +++|++++..|+.+.... +..|++++.++.... + ...+....+++..|+ .+|.+ .++
T Consensus 188 ~~g~~~~VlVs~~~hP~~~~v~~t~a~~~GieV~~v~~~~~-----~------~~~~~v~~vlvq~P~-~~G~v---~dv 252 (993)
T PLN02414 188 LKGKKKKFLIASNCHPQTIDVCQTRADGLGLEVVVADEKDF-----D------YSSGDVCGVLVQYPA-TDGEV---LDY 252 (993)
T ss_pred ccCCCCEEEEcCccCHhHHHHHHHhhhhcCCEEEEecchhh-----c------cccCceEEEEEecCC-CCeEE---cCH
Confidence 43 478999999999876544 456899888875321 1 111123344444444 49999 568
Q ss_pred HHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCcccc---CCCCceEEEEEeeCCCCCCChHHHH
Q 014936 196 QKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRW---IVPGWRLGWFVTTDPCGMFRKPKVV 272 (415)
Q Consensus 196 ~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~---~~~G~r~G~~~~~~~~~~~~~~~~~ 272 (415)
++|+++|+++|+++++ .++..... ...+...++.+ +++++..|+. +..|.+.|++.+++. +.
T Consensus 253 ~~I~~~ah~~GaL~iV-aad~lal~---~l~~pge~GAD---i~vgsgqKwg~P~G~GGP~aGflavr~~--------~~ 317 (993)
T PLN02414 253 AEFVKNAHANGVKVVM-ATDLLALT---MLKPPGEWGAD---IVVGSAQRFGVPMGYGGPHAAFLATSQE--------YK 317 (993)
T ss_pred HHHHHHHHHcCCEEEE-EECHHHhc---CCCCHhhccCc---EEEECCCccccCCCCCCCCeeEEEECHH--------HH
Confidence 8999999999999999 55443111 11134455555 8889999984 124566999998652 21
Q ss_pred HHHH-------------------------hhccccCCchhHHHHHHHHhh-----CCCcHHHHHHHHHHHHHHHHHHHHH
Q 014936 273 ERMK-------------------------KYFDILGDPATFIQAAVPSIL-----QQPDEVFFKKTLNLLKQSVDICYNK 322 (415)
Q Consensus 273 ~~~~-------------------------~~~~~~~~~~~~~~~a~~~~l-----~~~~~~~~~~~~~~~~~~~~~l~~~ 322 (415)
+.+- ..+.-.++.|.-+..++.+.+ ..+....+++..++..++..++.+.
T Consensus 318 r~~PgriVG~s~d~~g~~~~~l~LqtReqhiRrEkaTsNict~qaL~A~la~~y~~~~g~~Gl~~Ia~ri~~la~~l~~~ 397 (993)
T PLN02414 318 RLMPGRIIGVSVDSSGKPALRMAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGVFAAG 397 (993)
T ss_pred hhCCCcccCcccCCCCCcccccccccccchhhhcccccchhHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHH
Confidence 1110 000001222322222222222 1222355788888899999999999
Q ss_pred hhcCCCCcCCCCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEee--CChhhHHHHHHH
Q 014936 323 IKEIPCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFA--VDPYSLEECLDR 400 (415)
Q Consensus 323 l~~~~~~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~--~~~~~l~~~l~~ 400 (415)
|+.. |+++...|..+ .+.++++ +..++.+.+ .++||.+.... .+.+|+|+. ++++||+.+++.
T Consensus 398 L~~~-G~~~~~~~~f~-~vt~~~~--------~~~~v~~~L-~~~gI~l~~~~----~~~lrvs~~e~~T~edId~L~~~ 462 (993)
T PLN02414 398 LKKL-GFQVQSLPFFD-TVKVKCS--------DADAIADAA-AKVGINLRVVD----ANTVTVSFDETTTLEDVDKLFKV 462 (993)
T ss_pred Hhhc-CCccCCCCCcC-eEEEecC--------CHHHHHHHH-HHCCCeeEEec----CCeEEEEeeccCCHHHHHHHHHH
Confidence 9876 67743222212 2333332 345666665 56799775432 467999994 689999999999
Q ss_pred HHH
Q 014936 401 IKS 403 (415)
Q Consensus 401 l~~ 403 (415)
|..
T Consensus 463 l~~ 465 (993)
T PLN02414 463 FAG 465 (993)
T ss_pred Hcc
Confidence 963
No 369
>PLN02994 1-aminocyclopropane-1-carboxylate synthase
Probab=99.51 E-value=3.3e-13 Score=108.20 Aligned_cols=115 Identities=18% Similarity=0.310 Sum_probs=89.9
Q ss_pred hHHHHHHHhhh-cccccccCcceeEecccCCCC-------------CCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHH
Q 014936 16 TIKGMLSLLMQ-SVDDEKNEKKVISLAMGDPTV-------------HSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPL 81 (415)
Q Consensus 16 ~~~~~~~~~~~-~~~~~~~~~~~i~l~~g~~~~-------------~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~ 81 (415)
+.-+.+..+.+ .+++..|+..+|+|+.+.+.. .+++.+++.+++++.+. ..|++..|.++
T Consensus 23 ~~~~~~~~~~~~~y~~~~np~G~I~lg~aEN~l~~dli~~~i~~~p~~d~~~~~~i~~~~~~~------a~Y~~~~G~~~ 96 (153)
T PLN02994 23 PYFAGWKAYDLNPFDLLHNPQGIIQMGLAENQLCSDLIEEWIEENPHADICTAEGTIDSFKDI------ALFQDYHGLAN 96 (153)
T ss_pred hHHHHHHHHhcCCCCcccCCCceEeeehhhhHhHHHHHHHHHhCCCccccCCcHHHHHHHHHH------hcCCCCCCcHH
Confidence 44455555555 367778999999999987521 12233344444444442 24888899999
Q ss_pred HHHHHHHHHhhhCC--CCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcc
Q 014936 82 TRRAIAEYLSRDLP--YKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPI 136 (415)
Q Consensus 82 lr~~ia~~~~~~~~--~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~ 136 (415)
||+++|+|+++++| ..+++++|++|+|+++++.+++.+++++||.|++++|+|+.
T Consensus 97 lR~AiA~~l~~~~g~~v~~~pd~Ivvt~Ga~~al~~l~~~l~dpGD~VlVp~P~Y~~ 153 (153)
T PLN02994 97 FRKAIANFMAEARGGRVKFDADMIVLSAGATAANEIIMFCIADPGDAFLVPTPYYAA 153 (153)
T ss_pred HHHHHHHHHHHHhCCCCccchhheEEcCCHHHHHHHHHHHHcCCCCEEEEeCCCCCC
Confidence 99999999999888 56889999999999999999999999999999999999974
No 370
>KOG1383 consensus Glutamate decarboxylase/sphingosine phosphate lyase [Amino acid transport and metabolism]
Probab=99.45 E-value=5.2e-11 Score=107.98 Aligned_cols=314 Identities=14% Similarity=0.101 Sum_probs=201.3
Q ss_pred CCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhc----C-CC---CEEEEcCCCCcchHHHHHhCCCeE
Q 014936 77 AGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLS----R-PG---ANILLPRPGFPIYELSAAFRHIEV 148 (415)
Q Consensus 77 ~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~----~-~g---d~vi~~~p~y~~~~~~~~~~g~~~ 148 (415)
++..++..++-+++...++.+ ....=..|+|+|+++.++.+... . +| ..++++...+.++...++.++.++
T Consensus 116 p~~~~~e~~~Vnm~~~L~~~~-~~~~g~~t~G~Ses~l~~~k~~~~~r~~~k~I~~p~iv~~~~v~~a~eK~a~yf~v~l 194 (491)
T KOG1383|consen 116 PVVRKLEAECVNMIANLFNAP-SDSCGCGTVGGSESGLAAKKSYRNRRKAQKGIDKPNIVTPQNVHAAFEKAARYFEVEL 194 (491)
T ss_pred chhHHHHHHHHHHHHHHhcCC-ccccCccccccchHHHHHHHHHHHHHHhccCCCCccccchHHHHHHHHHHHhhEEEEE
Confidence 456788888888888777755 22344678899999666655532 1 23 368888889999999999999999
Q ss_pred EEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhh-cCcEEEEccccCCcccC-CCCcc
Q 014936 149 RHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANK-LKTLVIADEVYGHLVFG-DKPFV 226 (415)
Q Consensus 149 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~-~~~~li~De~~~~~~~~-~~~~~ 226 (415)
..+++++ +++.+|+..+.+.+++++..++..-|+.|+|.+ +++++|.++..+ +++.+++|.+-+.|... +....
T Consensus 195 ~~V~~~~-~~~~~D~~k~~~~i~eNti~lv~~~~~~p~G~~---e~ve~l~~l~~e~w~ipiHvDa~~GgFi~p~~~~~~ 270 (491)
T KOG1383|consen 195 REVPLDE-GDYRVDPGKVVRMIDENTIMLVGSLPNFPTGEI---EDVEKLADLLLEIWDIPIHVDACLGGFINPAGYLNE 270 (491)
T ss_pred Eeeeccc-cceEecHHHHHHHhccceEEEEEEcCCCCccch---hhHHHHHHHHHHHhCCceeecccCccccccccccCc
Confidence 9999976 678999999999999999999999999999999 999999999999 99999999999998863 21111
Q ss_pred cccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCC----hHHHHHHHHhhccccC---CchhHHHHHHHHhhCC
Q 014936 227 PMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFR----KPKVVERMKKYFDILG---DPATFIQAAVPSILQQ 299 (415)
Q Consensus 227 ~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~----~~~~~~~~~~~~~~~~---~~~~~~~~a~~~~l~~ 299 (415)
.-..+....-+=.-.+.+|. |+.--..||++-++...+.. +.+....+.......+ +.....|++. ++ .
T Consensus 271 ~~fdFr~p~V~Sisa~~HKY-Gl~~~G~~~vl~r~k~~~~~q~~~~~~w~Gg~y~s~TlngSR~g~~va~~wa~--~~-~ 346 (491)
T KOG1383|consen 271 EEFDFRVPGVTSISADGHKY-GLAPAGSSWVLYRNKELLPHQLFFHTDWLGGIYASPTLNGSRPGSQVAAQWAA--LM-S 346 (491)
T ss_pred cccccCCCCceeEeecccee-eeeecCcEEEEEcccccccceEEEeccccCccccCcccccCCcccHHHHHHHH--HH-H
Confidence 11112111111122244674 66444489998876542210 0000000111100111 1222333333 23 2
Q ss_pred CcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCC
Q 014936 300 PDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGL 379 (415)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~ 379 (415)
..++.+.+..+.+.+....+.+.+++.+++.++..|.-++.. +.... -+.-+ +..+|++.|-.+..-..
T Consensus 347 lG~eGY~~~~~~ive~~~~l~egie~i~~i~i~gkp~vs~~~---~~s~~----~~i~e-lsd~l~~~GW~lnalq~--- 415 (491)
T KOG1383|consen 347 LGEEGYRENTQNIVETARKLREGIENIKGIKIVGKPLVSFIL---FGSND----VNIFE-LSDLLRKKGWILNALQF--- 415 (491)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHhhhccccceecCCCcEEEEE---ccCCc----cchhh-hhHHHHhcCcCccccCC---
Confidence 334667778888999999999999998888865444433222 22211 12333 45566777877654333
Q ss_pred CCeEEEEe--e-CChhhHHHHHHHHHHHHHHHHH
Q 014936 380 KNWLRVTF--A-VDPYSLEECLDRIKSFYQRHAK 410 (415)
Q Consensus 380 ~~~iRi~~--~-~~~~~l~~~l~~l~~~~~~~~~ 410 (415)
+..+-+++ - ..++--++++..|.++++++..
T Consensus 416 P~a~Hi~vt~~~~~~~~A~~~v~Di~~~~~el~~ 449 (491)
T KOG1383|consen 416 PAAIHICVTRVHAREDVADRFVADIRKVVEELKS 449 (491)
T ss_pred CCceEEEEEeeeccHHHHHHHHHHHHHHHHHHHh
Confidence 23455555 2 3344457777888887777654
No 371
>TIGR03811 tyr_de_CO2_Ent tyrosine decarboxylase, Enterococcus type. This model represents tyrosine decarboxylases in the family of the Enterococcus faecalis enzyme Tdc. These enzymes often are encoded next to tyrosine/tyramine antiporter, together comprising a system in which tyrosine decarboxylation can protect against exposure to acid conditions. This clade differs from the archaeal tyrosine decarboxylases associated with methanofuran biosynthesis.
Probab=99.45 E-value=3.3e-10 Score=110.64 Aligned_cols=256 Identities=13% Similarity=0.118 Sum_probs=161.8
Q ss_pred cHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCC----------
Q 014936 54 THVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRP---------- 123 (415)
Q Consensus 54 ~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~---------- 123 (415)
.+.+...+...+-+.....|...++...+++.+.+++.+..|++- ..=.+|+|||.|+..++....+.
T Consensus 96 ~paila~~~a~~~N~n~~~~e~SP~~t~lE~~vi~~la~l~G~~~--~~G~~TsGGT~ANl~aL~~AR~~k~~p~a~~~~ 173 (608)
T TIGR03811 96 MPAILAYNYAMLWNGNNVAYESSPATSQMEEEVGKEFATLMGYKN--GWGHIVADGSLANLEGLWYARNIKSLPFAMKEV 173 (608)
T ss_pred HHHHHHHHHHHHhCCCCCccccCchHHHHHHHHHHHHHHHhCCCC--CCeEEeCChHHHHHHHHHHHHHhhhccchhhhc
Confidence 344444443433333333444445678999999999999888753 33458899999888766554310
Q ss_pred ------------------------------------------C------CEEEEcCCCCcchHHHHHhCCCe---EEEee
Q 014936 124 ------------------------------------------G------ANILLPRPGFPIYELSAAFRHIE---VRHFD 152 (415)
Q Consensus 124 ------------------------------------------g------d~vi~~~p~y~~~~~~~~~~g~~---~~~~~ 152 (415)
| .+++++.-.|+++...+...|+. ++.+|
T Consensus 174 ~~~~~~~~~~w~l~n~~~~~~~~l~~~~~~~~~~~~~~~~~~g~~~~~~~~vl~s~~aHyS~~KAa~ilGlG~~~vv~Vp 253 (608)
T TIGR03811 174 KPELVAGKSDWELLNMPTKEIMDLLESAGDQIDEIKAHSARSGKDLQKLGKWLVPQTKHYSWLKAADIIGIGLDQVIPVP 253 (608)
T ss_pred cccccccccchhhcccccccccccccccccchhhhhhhccccccccccceEEEECCCccHHHHHHHHHcCCCcccEEEee
Confidence 0 05888888899999999999984 78888
Q ss_pred ccCCCCCCCChhHHHhhcCC----C--ceEEEecCCCCccccCCCHHHHHHHHHHH---hhcCc--EEEEccccCCcc--
Q 014936 153 LLPDKGWEVDLDDIESLADQ----N--TVALVIINPGNPCGNVYSYQHLQKLAETA---NKLKT--LVIADEVYGHLV-- 219 (415)
Q Consensus 153 ~~~~~~~~~~~~~l~~~~~~----~--~~~v~i~~p~nptG~~~~~~~l~~i~~~~---~~~~~--~li~De~~~~~~-- 219 (415)
++ .++.+|++.|++.+++ . +-+|+.+-.+..+|.+ +++.+|+++| +++|+ ++++|.+|+++.
T Consensus 254 vD--~~~rmd~~~L~~~I~~~~~~g~p~~~VVataGTT~~Gai---Dpl~eI~~l~~~~~~~gl~~~lHVDAAyGG~~~~ 328 (608)
T TIGR03811 254 VD--SNYRMDINELEKIIRKLAAEKTPILGVVGVVGSTEEGAV---DGIDKIVALRNKLMKEGIYFYLHVDAAYGGYGRA 328 (608)
T ss_pred cC--CCCcCCHHHHHHHHHHHHhcCCCeEEEEEEcCCcCCccc---CCHHHHHHHHHHHHHcCCceeEeeeccccchhhh
Confidence 75 4567999999988753 1 3345666778889999 6777777776 67887 699999999853
Q ss_pred -cCCCC--cc----------------------------cccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCCh
Q 014936 220 -FGDKP--FV----------------------------PMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRK 268 (415)
Q Consensus 220 -~~~~~--~~----------------------------~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~ 268 (415)
+-... .. .+..+... ..|.+ .+||. +......|.++.++..
T Consensus 329 l~~~~~~~~~p~~~~~~~~~~~~~f~~~~~~l~~~~~~~l~gle~A-DSItv-DpHK~-g~~Py~~G~ll~Rd~~----- 400 (608)
T TIGR03811 329 IFLDEDDNFIPYDDLQEVHAEYGVFTEKKEYISREVYNAYKAISEA-ESVTI-DPHKM-GYIPYSAGGIVIQDIR----- 400 (608)
T ss_pred hhccccccccccchhhcccccccccccccccccHhHHHHHhcCcCc-eEEEe-Ccccc-cccCCCeEEEEEeCHH-----
Confidence 11100 00 01111111 12433 78998 6666778999987632
Q ss_pred HHHHHHHHhh---cc------------ccCCchhHHH--HHHHHhhCCC--cHHHHHHHHHHHHHHHHHHHHHhhcC
Q 014936 269 PKVVERMKKY---FD------------ILGDPATFIQ--AAVPSILQQP--DEVFFKKTLNLLKQSVDICYNKIKEI 326 (415)
Q Consensus 269 ~~~~~~~~~~---~~------------~~~~~~~~~~--~a~~~~l~~~--~~~~~~~~~~~~~~~~~~l~~~l~~~ 326 (415)
+.+.+... .. .....+.... .++...++.. ..+.+.++.++..+.++++.+.|+.+
T Consensus 401 --~~~~~~~~a~Yl~~~~~~~p~~~g~~~legSR~ga~AlklW~~lr~l~~G~~Gyg~~i~~~i~~A~~~~~~L~~~ 475 (608)
T TIGR03811 401 --MRDVISYFATYVFEKGADIPALLGAYILEGSKAGATAASVWAAHKVLPLNVTGYGKLIGASIEGAHRFYDFLNNL 475 (608)
T ss_pred --HHHHHhcCcchhccccccCcccccccceecCCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 33322211 00 0112222222 2222222222 35678888899999999999999874
No 372
>COG1982 LdcC Arginine/lysine/ornithine decarboxylases [Amino acid transport and metabolism]
Probab=99.39 E-value=5e-10 Score=105.90 Aligned_cols=235 Identities=14% Similarity=0.093 Sum_probs=152.2
Q ss_pred CcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCC
Q 014936 78 GLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDK 157 (415)
Q Consensus 78 g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~ 157 (415)
-+.+..+..|+.++ .....++++|+|.++.+++.+++.+||.|+++.+||-+....+...|+..+++......
T Consensus 71 ~i~eAqe~aA~~fg-------Ad~tyFvvNGTS~ank~vi~a~~~~GD~VLvdRN~HKSi~~glilaGa~Pvyl~p~~np 143 (557)
T COG1982 71 PIKEAQELAARVFG-------ADHTYFVVNGTSTANKAVINAVLTPGDKVLVDRNCHKSIHHGLILAGATPVYLEPSRNP 143 (557)
T ss_pred cHHHHHHHHHHHhC-------CCceEEEECCccHHHHHHHHhhcCCCCEEEecCCccHHHHHHHHHcCCceEEecCCCCc
Confidence 35677788888773 34578999999999999999999999999999999999999999999998887643222
Q ss_pred ----CCCCChhHHHhhcCC--Cc-eEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccc
Q 014936 158 ----GWEVDLDDIESLADQ--NT-VALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGV 230 (415)
Q Consensus 158 ----~~~~~~~~l~~~~~~--~~-~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~ 230 (415)
-.+++.+.+++.+.. .. +++++++|+. -|++++ +++|.++++..++++.+|+++....-..... +- +
T Consensus 144 ~~gi~ggI~~~~~~~~l~~~~~~~k~~vitnpTY-dGv~~n---~~~i~~~~~~~~a~v~~deah~~~~~~~~~l-~~-~ 217 (557)
T COG1982 144 LYGIIGGIPLETFKEALLAHPDAEKLAVITNPTY-DGVCYN---LRKIVELLHHYGAWVLYDEAHPAHFDFSPML-PE-S 217 (557)
T ss_pred cccccCCCCHHHHHHHHHhChhhheeEEEecCcc-ceEeec---HHHHHHHHhhcCceEEhhhcCcccccccccC-cc-h
Confidence 145789999886643 34 7788988865 578855 6677777779999999999997644211111 11 1
Q ss_pred cCCCCCeEEEccCccccCCCCce-EEEEEeeCCCCCCChHHHHHHHHhhcc-c-cCCchhHHHHHHH---HhhCCCcHHH
Q 014936 231 FGSTVPILTLGSLSKRWIVPGWR-LGWFVTTDPCGMFRKPKVVERMKKYFD-I-LGDPATFIQAAVP---SILQQPDEVF 304 (415)
Q Consensus 231 ~~~~~~~i~~~s~sK~~~~~G~r-~G~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~a~~---~~l~~~~~~~ 304 (415)
-.....+++..|.+|. .+++. .+.+...+.. .. -.++++.... + +.+++.+..+.+. ..........
T Consensus 218 ~~~~~~~~~tqS~HK~--l~alSQaS~iHv~~~~-~~----~~~r~nea~~~h~STSPsY~l~ASlD~Ar~~~~~~G~~l 290 (557)
T COG1982 218 ALNGGADFVTQSTHKL--LAALSQASMIHVKDGR-AV----NHERFNEALMMHQSTSPSYPLMASLDVARMQEGNAGREL 290 (557)
T ss_pred hhhcCceEEEechhhh--hhhhhhhHHHhhCCCc-cC----CHHHHHHHHHHHccCCchHHHHHHHHHHHHhhhhhhHHH
Confidence 1113456899999998 34444 4445554311 11 1234443322 1 2333333322222 2222222344
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCCCcCC
Q 014936 305 FKKTLNLLKQSVDICYNKIKEIPCISCP 332 (415)
Q Consensus 305 ~~~~~~~~~~~~~~l~~~l~~~~~~~~~ 332 (415)
+++..+..-+.++.+.+.+++++++.++
T Consensus 291 ~~~~~~~~i~~r~~~~~~~~~~~~~~~~ 318 (557)
T COG1982 291 WQEVIDEAIDFRKALRRLINEIGFFPVL 318 (557)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCeeec
Confidence 4445666667777777777777666644
No 373
>KOG2467 consensus Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=99.36 E-value=1.3e-09 Score=95.77 Aligned_cols=336 Identities=15% Similarity=0.111 Sum_probs=197.9
Q ss_pred CCcHHHHHHHHHHHhcCCCCCCCC--CCCcHHHHHHHHHHHhhh--CCCCCCCC----cEEEeCChHHHHHHHHHHhcCC
Q 014936 52 HTTHVATEAVAEALLSEKFNGYAP--TAGLPLTRRAIAEYLSRD--LPYKLTPN----DVFVTSGCTQAIDVAMALLSRP 123 (415)
Q Consensus 52 ~~~~~~~~a~~~~~~~~~~~~y~~--~~g~~~lr~~ia~~~~~~--~~~~~~~~----~i~i~~g~~~al~~~~~~l~~~ 123 (415)
-.+.++.+|+-..+.+....+|+- ..|-.+....+.....++ --++++|+ +|.-. +++.|+..+..++++|
T Consensus 51 Fts~aVmeAlGS~ltNKYSEGyPG~RYYGGne~ID~iE~LCq~RALeaF~ldp~kWGVNVQp~-SGSPANfavYtall~P 129 (477)
T KOG2467|consen 51 FTSRAVMEALGSCLTNKYSEGYPGARYYGGNEYIDQIELLCQKRALEAFGLDPEKWGVNVQPY-SGSPANFAVYTALLKP 129 (477)
T ss_pred chHHHHHHHHhHHhhcccccCCCcccccCcchHHHHHHHHHHHHHHHHhCCCHHHCceeeccC-CCCchhhHHHhhhcCC
Confidence 346888899888887644444442 222234443333322211 01234443 33333 4567778899999999
Q ss_pred CCEEEEcCCCCcc-hHHHHHhCCCeE---------EEeeccCCCCCCCChhHHHhhcCC-CceEEEecCCCCccccCCCH
Q 014936 124 GANILLPRPGFPI-YELSAAFRHIEV---------RHFDLLPDKGWEVDLDDIESLADQ-NTVALVIINPGNPCGNVYSY 192 (415)
Q Consensus 124 gd~vi~~~p~y~~-~~~~~~~~g~~~---------~~~~~~~~~~~~~~~~~l~~~~~~-~~~~v~i~~p~nptG~~~~~ 192 (415)
+++|.--+.-+.+ .......-+-++ ..+.+++..+ -+|-+.|++.... +++++ ++..+. --..++.
T Consensus 130 h~RiMGLDLP~GGHLsHGy~T~~kkISa~SiyFeSmPYkv~~~TG-~IDYD~Le~~A~~frPk~i-iaG~Sa-Y~R~~DY 206 (477)
T KOG2467|consen 130 HERIMGLDLPSGGHLSHGYQTPTKKISATSIYFESMPYKVDPSTG-YIDYDKLEKTATLFRPKLI-IAGTSA-YSRLIDY 206 (477)
T ss_pred CCeeeeccCCCCCccccccccCCceeeeeeeecccCceeeCCCCC-ceehHHHHHHHHhcCCcEE-Eecccc-chhhccH
Confidence 9999744322221 111111111222 2233455444 5899999875443 45544 443211 1122344
Q ss_pred HHHHHHHHHHhhcCcEEEEccccCC-cccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCC----
Q 014936 193 QHLQKLAETANKLKTLVIADEVYGH-LVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFR---- 267 (415)
Q Consensus 193 ~~l~~i~~~~~~~~~~li~De~~~~-~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~---- 267 (415)
. ++.++|.+.|.+++.|-+|.- ++-.+.-+.|+..-+ |+..+.+|+ +-|.|.|.+.-++--.-.+
T Consensus 207 a---R~R~Iad~~gA~Lm~DMAHISgLVAA~vipsPFey~D-----iVTTTTHKs--LRGPRg~mIFyRkGvk~~~~k~g 276 (477)
T KOG2467|consen 207 A---RFRKIADKVGAYLMADMAHISGLVAAGVIPSPFEYCD-----IVTTTTHKS--LRGPRGAMIFYRKGVKSIKPKQG 276 (477)
T ss_pred H---HHHHHHHhcCceeehhhhhHHHHHhcccCCCcccccc-----eeecccccc--ccCCcceeEEEeccCCcCCCCCC
Confidence 4 444555588999999999954 333344444443322 778899998 6788888877643110000
Q ss_pred ---hHHHHHHHHhhcc--ccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEE
Q 014936 268 ---KPKVVERMKKYFD--ILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVM 342 (415)
Q Consensus 268 ---~~~~~~~~~~~~~--~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~ 342 (415)
--++-++++.... +.+++......+++.+|++-....+....+++.++.+.+.+.|.++ |...+........++
T Consensus 277 ~~i~ydlE~kINfaVFP~lQGGPHNhtIaalAvALkQa~tpefk~Yq~qV~~Nakala~~l~~~-Gy~lvtgGTDnHlvL 355 (477)
T KOG2467|consen 277 KEILYDLEDKINFAVFPGLQGGPHNHTIAALAVALKQAMTPEFKEYQKQVLKNAKALASALISR-GYKLVTGGTDNHLVL 355 (477)
T ss_pred CcceechhhhhhhhccccccCCCCcchHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHHc-CceEecCCccceEEE
Confidence 0134445544322 3356666677778888887655677888899999999999999988 777554445556677
Q ss_pred EecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCC-----CCeEEEEe-e-----CChhhHHHHHHHHHHHHHH
Q 014936 343 LKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGL-----KNWLRVTF-A-----VDPYSLEECLDRIKSFYQR 407 (415)
Q Consensus 343 ~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~-----~~~iRi~~-~-----~~~~~l~~~l~~l~~~~~~ 407 (415)
+++..... +...++..|+.-+|.++--..++. ++.||+.. + ..++|+++..+-|.++++-
T Consensus 356 vDLr~~G~-----dGarvE~vle~~~I~~NKNtvpGD~Sal~PgGiRiGtPAmTsRG~~e~df~~v~~fi~~av~i 426 (477)
T KOG2467|consen 356 VDLRPKGV-----DGARVEKVLELCHIALNKNTVPGDKSALSPGGIRIGTPAMTSRGFGEEDFEKVADFIDRAVKI 426 (477)
T ss_pred EeccccCC-----chHHHHHHHHHhhhhhcCCcCCCCccccCCCceeccchhhcccCccHHHHHHHHHHHHHHHHH
Confidence 77765322 334456777777888765555553 78999987 3 3468888888877777653
No 374
>COG1003 GcvP Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain [Amino acid transport and metabolism]
Probab=99.35 E-value=1.4e-09 Score=97.97 Aligned_cols=315 Identities=16% Similarity=0.129 Sum_probs=195.4
Q ss_pred CCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCCh-HH----HHHHHHHHh-cCCC----CEEEEcCCCCcchHHHHHhCC
Q 014936 76 TAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGC-TQ----AIDVAMALL-SRPG----ANILLPRPGFPIYELSAAFRH 145 (415)
Q Consensus 76 ~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~-~~----al~~~~~~l-~~~g----d~vi~~~p~y~~~~~~~~~~g 145 (415)
..|+.++...+.+|+.+-- .-|.|-+.+.+ .+ ++. +++.. -..| +.+++++..|......+...|
T Consensus 104 vqG~l~li~~Lq~~L~~IT----G~DavsLQP~AGAqGE~aGll-~Ir~YHe~rG~~~R~~~LIP~SAHGTNPASAam~G 178 (496)
T COG1003 104 VQGYLELIYELQEWLKEIT----GMDAVSLQPNAGAQGEYAGLL-AIRAYHESRGEGHRNICLIPDSAHGTNPASAAMAG 178 (496)
T ss_pred HHHHHHHHHHHHHHHHHhc----CCceeeccCCCCcchhhHHHH-HHHHHHHHcCCCcCcEEEeeccccCCChhhHhhcC
Confidence 3677888888888887522 34566554442 22 333 23332 2333 589999999999999999999
Q ss_pred CeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCc
Q 014936 146 IEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPF 225 (415)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~ 225 (415)
.+|+.|+.+.+ ..+|+++|+++..+++.++.+++|+. .|.. .+.+.+|+++.+++|..+..|.+.-....+-..+
T Consensus 179 ~~VV~V~~~~~--G~VDlddLk~k~~~~~AalMiTnPsT-~GvF--E~~I~ei~~ivH~~Gg~vY~DGANlNA~vG~~rP 253 (496)
T COG1003 179 FKVVVVKCDEN--GNVDLDDLRAKAEDNLAALMITNPST-LGVF--EEDIREICEIVHEAGGQVYYDGANLNAIVGLARP 253 (496)
T ss_pred ceEEEEecCCC--CCccHHHHHHHhccceeEEEeccCcc-cccc--hhhHHHHHHHHHHcCCEEEecCcchhhhhccccc
Confidence 99999998654 45999999999999999999999985 3443 2779999999999999999999976655443333
Q ss_pred ccccccCCCCCeEEEccCccccCC----CCceEEEEEeeCCCC-CCChH----HHHH-HHH--hh----ccccCCchhHH
Q 014936 226 VPMGVFGSTVPILTLGSLSKRWIV----PGWRLGWFVTTDPCG-MFRKP----KVVE-RMK--KY----FDILGDPATFI 289 (415)
Q Consensus 226 ~~~~~~~~~~~~i~~~s~sK~~~~----~G~r~G~~~~~~~~~-~~~~~----~~~~-~~~--~~----~~~~~~~~~~~ 289 (415)
.. ++.+ |+=.-++|+|.. +|..+|=+.+...-. ....| +..+ .+. .. .......|...
T Consensus 254 Gd---~G~D---V~HlNLHKTF~iPHGGGGPG~GPvgVk~~L~pfLP~p~~~~~~~~y~~~~~~~~s~g~~~a~~Gs~~i 327 (496)
T COG1003 254 GD---MGFD---VVHLNLHKTFCIPHGGGGPGAGPVGVKAHLAPFLPGPVVYHDVGEYRLDYDGKKSIGVSAAPYGSASI 327 (496)
T ss_pred cc---cccc---eEEeecccccccCCCCCCCCCCceehHhhccccCCCCcccCCCccccccCCCCccceeeccccCcchH
Confidence 22 3332 333358888853 345566666532100 00000 0000 000 00 00011122222
Q ss_pred HHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCC--CceEEEEecCccccCCCCCHHHHHHHHHhhc
Q 014936 290 QAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPE--GSMAVMLKLNLSLLDDIIDDIDFCFKLAKEE 367 (415)
Q Consensus 290 ~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~--~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~ 367 (415)
...+.+++.....+.+++..+..--+++++.++|+..=.+. + .+. ...-+.+.....+-+...+..++.++|+ .+
T Consensus 328 l~~a~~YI~~mG~~GL~~ase~AvLNANYia~rL~~~y~~~-y-~~~~~~~HE~ild~r~l~~~~Gv~~~DvAKrLl-D~ 404 (496)
T COG1003 328 LPIAWAYIRMMGADGLKQASEVAVLNANYIARRLKGYYPVP-Y-TGENRVAHECILDARPLKKETGVRALDVAKRLL-DY 404 (496)
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHhHHHHHHHhhhcCccc-c-CCCCcceeEEEeechHhHhhcCCcHHHHHHHHH-hc
Confidence 33333344444457788888888889999999998621222 1 333 2333444443211112225678888875 57
Q ss_pred CeEEEcCCCCC--CCCeEEEEe--eCChhhHHHHHHHHHHHHHHHHH
Q 014936 368 SVIILPGTAVG--LKNWLRVTF--AVDPYSLEECLDRIKSFYQRHAK 410 (415)
Q Consensus 368 gi~v~~g~~~~--~~~~iRi~~--~~~~~~l~~~l~~l~~~~~~~~~ 410 (415)
|+.- |--+|- ..+.+-|=. +-++++||..++++.++.++..+
T Consensus 405 GfHa-PT~~FPliV~~tLMIEPTEsEsk~eLDrf~dami~I~~Ea~~ 450 (496)
T COG1003 405 GFHA-PTMYFPLIVAGTLMIEPTESESKEELDRFIDAMIAIREEADA 450 (496)
T ss_pred CCCC-CcccCccccccceeecCCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 8874 444454 467777777 45779999999999988877544
No 375
>COG3844 Kynureninase [Amino acid transport and metabolism]
Probab=99.35 E-value=1.6e-09 Score=93.97 Aligned_cols=298 Identities=16% Similarity=0.118 Sum_probs=189.7
Q ss_pred cHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcC--CCCEEEEcCCCCcc-----hHHHHHhCCCeEEEe
Q 014936 79 LPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSR--PGANILLPRPGFPI-----YELSAAFRHIEVRHF 151 (415)
Q Consensus 79 ~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~--~gd~vi~~~p~y~~-----~~~~~~~~g~~~~~~ 151 (415)
.-++-+.+.+.+.... +..+.+++++.+++-.++.++.+..+ +|++||+++-.-++ ....+...+.. +
T Consensus 74 W~~lp~~lgdklApLi--GA~~~Evvv~dtts~nl~k~L~aalr~~~~r~vIv~E~~~fpTdly~a~g~~~~~~~~---~ 148 (407)
T COG3844 74 WFDLPERLGDKLAPLI--GARAGEVVVTDTTSINLFKVLAAALRPQEGRRVIVSEGDNFPTDLYIAEGLADLLGIG---Y 148 (407)
T ss_pred hhhchhHHHHHhhhhh--cCCCCceEEeCCcchHHHHHHHHHhccCCCceEEeecCCCCCcchhhhcchhhhhccc---c
Confidence 3455555555554333 45788999999999988888877653 58888888644332 22233333433 1
Q ss_pred eccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCccccccc
Q 014936 152 DLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVF 231 (415)
Q Consensus 152 ~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~ 231 (415)
++ ...+.+++++++++..+..|++++.+.-||+.+ ++.+|-++++++|++++-|-+|+.+. -+..+...
T Consensus 149 ~~----~~~~~P~~~~~~~~dd~AvV~L~~V~y~TGql~---dm~aiT~~AH~~galv~wDLAHsaGa----vp~~Lh~~ 217 (407)
T COG3844 149 DL----EGVIAPRALEEAITDDVAVVLLSHVNYKTGQLL---DMRAITALAHQHGALVGWDLAHSAGA----VPVDLHAA 217 (407)
T ss_pred cc----eeeeChHHHHHhhccceEEEEecccccccccee---eHHHHHHHHHhcCceEEeehhcccCC----cceeeccc
Confidence 11 112467789999988888889999999999995 58888888999999999999998743 33334444
Q ss_pred CCCCCeEEEccCccccCC-CCceEEEEEeeCCC--------CCCChH---HHHHHHHhh----ccccCCchhHHHHHHHH
Q 014936 232 GSTVPILTLGSLSKRWIV-PGWRLGWFVTTDPC--------GMFRKP---KVVERMKKY----FDILGDPATFIQAAVPS 295 (415)
Q Consensus 232 ~~~~~~i~~~s~sK~~~~-~G~r~G~~~~~~~~--------~~~~~~---~~~~~~~~~----~~~~~~~~~~~~~a~~~ 295 (415)
+.+ +-|++..|.+.. ||-..|..+.++.. .+++.. ++.+.+... ....++++..+..++..
T Consensus 218 gaD---faigcsyKYLNgGPGapa~l~v~~~h~e~~~~~lsgW~gha~pf~m~~~y~p~~ga~rf~~gt~~V~s~aal~~ 294 (407)
T COG3844 218 GAD---FAIGCSYKYLNGGPGAPAGLFVAPRHRERSWPPLSGWWGHARPFAMEEVYAPGPGARRFLCGTQPVLSLAALEG 294 (407)
T ss_pred CCC---eeeeeeceeccCCCCCceeEEeccccccccccccccccCCCCcchhhhccCcCccccceeeCCcchhhhHHHhh
Confidence 443 778888898743 55444444443211 111000 001000000 00123445555566666
Q ss_pred hhCCCcHHHHHHHHHHHHHHHHHHHHHhhcC-C--CCcCCCCCCC----ceEEEEecCccccCCCCCHHHHHHHHHhhcC
Q 014936 296 ILQQPDEVFFKKTLNLLKQSVDICYNKIKEI-P--CISCPHKPEG----SMAVMLKLNLSLLDDIIDDIDFCFKLAKEES 368 (415)
Q Consensus 296 ~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-~--~~~~~~~p~~----g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~g 368 (415)
.|+...+-.+.+.+++--...+++.+.++.. + ++. +..|.. |-.+.+..+ ...++.+.| .+.|
T Consensus 295 aLDifa~~~i~~lR~kSlaLTd~fieLvEa~~~~~~l~-l~tPr~~~~rGsqvS~~hp--------~~~~V~qaL-i~rG 364 (407)
T COG3844 295 ALDIFADVDITELRKKSLALTDYFIELVEARCEYYGLT-LVTPRAHEERGSQVSLYHP--------HGYQVMQAL-IDRG 364 (407)
T ss_pred hhhhhhhcCHHHHHHhhhHHHHHHHHHHHhccccCCcE-EeccchhhhccceeeEecC--------cHHHHHHHH-HHcC
Confidence 6654434447888888888999999998853 2 455 334432 455665565 456666665 6679
Q ss_pred eEEEcCCCCCCCCeEEEEee---CChhhHHHHHHHHHHHHHHHH
Q 014936 369 VIILPGTAVGLKNWLRVTFA---VDPYSLEECLDRIKSFYQRHA 409 (415)
Q Consensus 369 i~v~~g~~~~~~~~iRi~~~---~~~~~l~~~l~~l~~~~~~~~ 409 (415)
|.. .|..++.+|+.++ .+-+|+-.+++.|.++++...
T Consensus 365 Vig----D~R~P~vlRfgftPlY~~~~DVw~AV~~L~evL~t~a 404 (407)
T COG3844 365 VIG----DFREPDVLRFGFTPLYVSFVDVWDAVDALEEVLDTLA 404 (407)
T ss_pred ccc----cccCCCeeeecCccceechhHHHHHHHHHHHHHHhhc
Confidence 862 3555789999995 578999999999999987643
No 376
>KOG1403 consensus Predicted alanine-glyoxylate aminotransferase [General function prediction only]
Probab=99.34 E-value=2.1e-10 Score=98.16 Aligned_cols=348 Identities=12% Similarity=0.099 Sum_probs=200.2
Q ss_pred cCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCC-CCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHH
Q 014936 33 NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKF-NGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQ 111 (415)
Q Consensus 33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~-~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~ 111 (415)
++..++|.-.+..- .--.+|++.+|....+..... .++-. .+|-+-....... +. .-+-+++++++++
T Consensus 45 ~g~~yLDCInNVaH---vghchp~VV~A~~kQmat~~tN~RFlh----d~lv~cA~~l~st-lP---eLsvc~F~NSGSE 113 (452)
T KOG1403|consen 45 EGTRYLDCINNVAH---VGHCHPEVVRAGAKQMATISTNNRFLH----DELVQCARTLTST-LP---ELSVCFFVNSGSE 113 (452)
T ss_pred CcccHHHHhhhhhh---cccCCHHHHHHHHHHHhHhcccchhhH----HHHHHHHHHHhhc-CC---CceEEEEecCCch
Confidence 35555554333221 123578898888777664221 12211 2333322222211 11 2346789999999
Q ss_pred HHHHHHHHhc---CCCCEEEEcCCCCcchHHHHH-------hCCC---eEEEeeccCC-CC----C----C-------CC
Q 014936 112 AIDVAMALLS---RPGANILLPRPGFPIYELSAA-------FRHI---EVRHFDLLPD-KG----W----E-------VD 162 (415)
Q Consensus 112 al~~~~~~l~---~~gd~vi~~~p~y~~~~~~~~-------~~g~---~~~~~~~~~~-~~----~----~-------~~ 162 (415)
|+.++++... +..|. |+.+..|++...... ..|. ++.++.+-|. +- + . .-
T Consensus 114 ANDLALRLAR~ftkhqDv-ItldHAYHGHl~s~mE~SPYKF~~g~~v~kpd~VHVAPcPDvyrGK~r~~~~~~a~~~~~Y 192 (452)
T KOG1403|consen 114 ANDLALRLARNFTKHQDV-ITLDHAYHGHLQSVMEVSPYKFNQGGGVAKPDYVHVAPCPDVYRGKFRDKMYPDADMGALY 192 (452)
T ss_pred hhHHHHHHHHhhcccCce-EEEechhccceeeeeeccceeccCCCCcCCCceeEecCCccccccccccccCCcccchhhh
Confidence 9999998864 34454 445555654433211 0111 1122222110 00 0 0 01
Q ss_pred hhHHHhhcC----C-CceEEEecCC-CCccccCC-CHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCC
Q 014936 163 LDDIESLAD----Q-NTVALVIINP-GNPCGNVY-SYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTV 235 (415)
Q Consensus 163 ~~~l~~~~~----~-~~~~v~i~~p-~nptG~~~-~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~ 235 (415)
.+.+++.+. . +..+.++... ++-.|+++ |..-.+++++..+.+|-..|.||++-+|..-|...+.++.++.-+
T Consensus 193 ad~vk~I~~d~~~~g~gvAAfiAEslQSCGGQiiPPagYFq~Va~~Vr~aGGv~IaDEVQvGFGRvG~hyWafq~y~fiP 272 (452)
T KOG1403|consen 193 ADPVKEICQDQLAKGQGVAAFIAESLQSCGGQIIPPAGYFQAVADAVRSAGGVCIADEVQVGFGRVGSHYWAFQTYNFIP 272 (452)
T ss_pred hhHHHHHHHHHHhcCCcHHHHHHHHHHhcCCcccCchhHHHHHHHHHhcCCCeEEeehhhhcccccchhhhhhhhhcccc
Confidence 122333221 1 1222233333 55567765 455588999999999999999999999888788877776665433
Q ss_pred CeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhh---ccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHH
Q 014936 236 PILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKY---FDILGDPATFIQAAVPSILQQPDEVFFKKTLNLL 312 (415)
Q Consensus 236 ~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~ 312 (415)
.++ ++.|. ...|.+++.+++.+ ++.+.+... ...+++.+|++.++..+.++..+++.+..+.+++
T Consensus 273 DIV---tmgKp-mGNGhPVa~Vattk--------eIA~Af~atgv~YFNTyGGnPVsCAv~laVm~v~e~E~Lq~ha~~v 340 (452)
T KOG1403|consen 273 DIV---TMGKP-MGNGHPVAAVATTK--------EIAQAFHATGVEYFNTYGGNPVSCAVGLAVMRVCEDENLQEHAQQV 340 (452)
T ss_pred chh---eeccc-CCCCCeeeEEeccH--------HHHHHhccccceehhccCCCchhHHHHHHHHHHHhhhhHHHHHHHH
Confidence 333 66798 67899999999865 788888763 2345788999999988888765556666666666
Q ss_pred HHHHHHHHHHhhc-CCCCcCCCCCCCceEEEEecCcccc---CCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEe-
Q 014936 313 KQSVDICYNKIKE-IPCISCPHKPEGSMAVMLKLNLSLL---DDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTF- 387 (415)
Q Consensus 313 ~~~~~~l~~~l~~-~~~~~~~~~p~~g~~~~~~l~~~~~---~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~- 387 (415)
-+..+.+...++. .+.+- . ...-|+|+-+++-+... ++.......+.++-+.++|.++.-.. ..+.+.|-.
T Consensus 341 G~~L~~lL~~~k~kh~~IG-D-vRGvGLFiGIdLVkD~~tRtP~tk~A~~~v~rlke~y~VLlsaDGP--h~NilKiKPP 416 (452)
T KOG1403|consen 341 GEKLEVLLRRLKQKHECIG-D-VRGVGLFIGIDLVKDRKTRTPDTKEAHWVVNRLKELYRVLLSADGP--HRNILKIKPP 416 (452)
T ss_pred HHHHHHHHHHHhhhcccee-c-cccceEEEeeeeecccccCCCcHHHHHHHHHHHHHhhhEEEecCCC--CCceeecCCC
Confidence 6666555555553 33333 2 34557777776632111 11112345556666668898865322 135566655
Q ss_pred -eCChhhHHHHHHHHHHHHHHH
Q 014936 388 -AVDPYSLEECLDRIKSFYQRH 408 (415)
Q Consensus 388 -~~~~~~l~~~l~~l~~~~~~~ 408 (415)
+.++++.++.+..|.+++.-.
T Consensus 417 mCFneena~e~v~~ld~iLT~m 438 (452)
T KOG1403|consen 417 MCFNEENADEFVLGLDEILTVM 438 (452)
T ss_pred cccChhhHHHHHHHHHHHHHHH
Confidence 467777777777777776543
No 377
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=99.32 E-value=3.8e-09 Score=107.03 Aligned_cols=280 Identities=14% Similarity=0.147 Sum_probs=170.2
Q ss_pred HHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhc---CCCCEEEEcCCCCcchHHHH----HhCCCeEEEee
Q 014936 80 PLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLS---RPGANILLPRPGFPIYELSA----AFRHIEVRHFD 152 (415)
Q Consensus 80 ~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~---~~gd~vi~~~p~y~~~~~~~----~~~g~~~~~~~ 152 (415)
-++...+++.. +.+..+.-+..++|++-++++.+.. +++++|++++-.|+.+.... +..|.+++.+
T Consensus 112 ~e~Qt~i~eLt------Gm~~aNaSl~d~atA~aEa~~~a~~~~~~~~~~vlv~~~~hP~~~~v~~t~a~~~g~~v~~~- 184 (939)
T TIGR00461 112 LNFQTVVSDLT------GLPVANASLLDEGTAAAEAMALSFNVSKKKANKFFVAKDLHPQTKSVLHTRAKPFGIEVIVV- 184 (939)
T ss_pred HHHHHHHHHHH------CCChhhhhccchhhHHHHHHHHHHHhhcCCCCEEEECCCCCcchHHHHHHHHHhcCcEEEEE-
Confidence 44556666665 5677788888888888787776642 23479999999998877544 4678888775
Q ss_pred ccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccC
Q 014936 153 LLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFG 232 (415)
Q Consensus 153 ~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~ 232 (415)
|+++|+..+ ++.++++.+|+. .|.+ +++++|+++++++|.+++++.-...+. ...+...++
T Consensus 185 ---------~~~~l~~~~--~~~~v~~q~Pn~-~G~i---ed~~~i~~~~h~~gal~~~~ad~~al~----ll~~Pge~G 245 (939)
T TIGR00461 185 ---------DCSDIKKAV--DVFGCLLQYPAT-DGSI---LDYKQLIDALHSHKSLVSVAADLMALT----LLTPPGHYG 245 (939)
T ss_pred ---------cHHHHhhcC--CEEEEEEECCCC-CeEE---ecHHHHHHHHHHcCCEEEEEechHHhC----CcCCHHHcC
Confidence 345566555 466777888875 8888 689999999999999999854433222 122223344
Q ss_pred CCCCeEEEccCccccCC----CCceEEEEEeeCCC---------CCCCh----HHHH-------HHHHhhccccC-Cch-
Q 014936 233 STVPILTLGSLSKRWIV----PGWRLGWFVTTDPC---------GMFRK----PKVV-------ERMKKYFDILG-DPA- 286 (415)
Q Consensus 233 ~~~~~i~~~s~sK~~~~----~G~r~G~~~~~~~~---------~~~~~----~~~~-------~~~~~~~~~~~-~~~- 286 (415)
.+ |++++ +|.|+. +|.-.|++.+++.- .+..| +.+. +.++..+.++. +.+
T Consensus 246 aD---i~vg~-~q~fg~p~g~GGP~aG~~a~~~~l~r~lPgrivG~s~D~~G~~~~~l~LqtReqhIrRekAtSNICt~q 321 (939)
T TIGR00461 246 AD---IVLGS-SQRFGVPMGYGGPHAAFFAVKDEYNRKMPGRIVGVSKDALGNTALRLALQTREQHIRRDKATSNICTAQ 321 (939)
T ss_pred Cc---EEeeC-CCccCCCCCCCCCceeeeeecHhhHhhCCCCceeEEecCCCCccceeecccccccccccccCcchhHHH
Confidence 43 55554 444454 24447777764420 00000 0000 11111111111 122
Q ss_pred hHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCccccCCCCCHHHHHHHHHhh
Q 014936 287 TFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKE 366 (415)
Q Consensus 287 ~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~ 366 (415)
.+...++..++..+..+.+++..++...++.++.+.|++. |++.. .+ .+|--+.+... . .+..++.+.+ .+
T Consensus 322 aL~a~~a~~Y~~~~G~~GL~~iA~~~~~~a~~l~~~L~~~-G~~~~-~~--~fF~~~~v~~~---~-~~~~~i~~~~-~~ 392 (939)
T TIGR00461 322 VLLANVASSYCVYHGPKGLKNIARRIHSLTSILANGLEND-PHELI-NK--TWFDTLTVKVG---N-GISSELLKAA-EE 392 (939)
T ss_pred HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHhC-CCccc-CC--CccceEEEEeC---C-CCHHHHHHHH-HH
Confidence 2222222223443456889999999999999999999985 88833 33 33422222210 0 1355666665 56
Q ss_pred cCeEEEcCCCCCCCCeEEEEe--eCChhhHHHHHHHHH
Q 014936 367 ESVIILPGTAVGLKNWLRVTF--AVDPYSLEECLDRIK 402 (415)
Q Consensus 367 ~gi~v~~g~~~~~~~~iRi~~--~~~~~~l~~~l~~l~ 402 (415)
.||.+.... .+.+++|+ .+++++++.+++.+.
T Consensus 393 ~gi~l~~~~----~~~i~~s~~E~~t~~di~~l~~~~~ 426 (939)
T TIGR00461 393 FNINLRAVD----TTTVGIALDETTTKADVENLLKVFD 426 (939)
T ss_pred CCCeeeecC----CCEEEEEeecCCCHHHHHHHHHHhc
Confidence 699976532 46899999 478899999999985
No 378
>PF02347 GDC-P: Glycine cleavage system P-protein; InterPro: IPR020580 This family consists of glycine cleavage system P-proteins (1.4.4.2 from EC) from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex (2.1.2.10 from EC (GDC) also annotated as glycine cleavage system or glycine synthase. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor, carbon dioxide is released and the remaining methylamin moiety is then transferred to the lipoamide cofactor of the H protein. GDC consists of four proteins P, H, L and T []. The reaction catalysed by this protein is: Glycine + lipoylprotein = S-aminomethyldihydrolipoylprotein + CO2 ; GO: 0004375 glycine dehydrogenase (decarboxylating) activity, 0055114 oxidation-reduction process; PDB: 1WYV_A 1WYT_C 1WYU_A.
Probab=99.19 E-value=1.1e-08 Score=95.14 Aligned_cols=281 Identities=15% Similarity=0.174 Sum_probs=145.1
Q ss_pred HHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHh---cCCCCEEEEcCCCCcchHHHH----HhCCCeEEEee
Q 014936 80 PLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALL---SRPGANILLPRPGFPIYELSA----AFRHIEVRHFD 152 (415)
Q Consensus 80 ~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l---~~~gd~vi~~~p~y~~~~~~~----~~~g~~~~~~~ 152 (415)
-++...+++.. +.+.-+.-+..+++++-+.++.+. .++.++|+++...|+.+.... ...|++++.++
T Consensus 113 fe~Qs~i~eLT------GmdvaNaSlyd~atA~aEa~~ma~r~~~~~~~~vlv~~~~hP~~~~v~~t~a~~~g~~iv~~~ 186 (429)
T PF02347_consen 113 FEYQSMICELT------GMDVANASLYDGATAAAEAMLMAVRATKRKRNKVLVPESLHPQTRAVLRTYAAPLGIEIVEVP 186 (429)
T ss_dssp HHHHHHHHHHH------TSSEE-SEBSSCCHHHHHHHHHHHHHHTT---EEEEETTS-CHHHHHHHHHCCHCCEEEEEE-
T ss_pred HHHHHHHHHhh------CCCccCCCCCChhHHHHHHHHHHHHhcccCCcEEEEcCCcChhhHHHHHHhhhhCCeEEEEec
Confidence 34555555555 344445556667666655554443 344569999999999887744 45788888888
Q ss_pred ccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccC
Q 014936 153 LLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFG 232 (415)
Q Consensus 153 ~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~ 232 (415)
.+... ..| ++++.+|++.+|+. .|.+ +++++|+++++++|..+++ .+.-. .... ..+...++
T Consensus 187 ~~~~~--~~d--------~~~~a~v~vq~Pn~-~G~~---ed~~~i~~~~h~~gal~~~-~ad~~-aL~~--l~~Pge~G 248 (429)
T PF02347_consen 187 LDEDG--TTD--------DDDTAAVMVQNPNT-FGVF---EDIKEIADIAHAAGALVIV-GADPN-ALGG--LKSPGEYG 248 (429)
T ss_dssp BBTTC--SB---------STTEEEEEEESS-T-TSB-----THHHHHHHHHHTT-EEEE-CGGCC-GCCT--C--GGGGT
T ss_pred ccccC--Ccc--------ccCeEEEEeecCCC-CceE---eeHHHHHHHHHHcCCEEEE-ecCHH-HHhC--cCChhhcC
Confidence 65432 223 56788999999986 7888 7799999999999998887 33322 2221 12233455
Q ss_pred CCCCeEEEccCccccCCC----CceEEEEEeeCCCCCC--------------ChHH-------HHHHHHhhcccc-CCch
Q 014936 233 STVPILTLGSLSKRWIVP----GWRLGWFVTTDPCGMF--------------RKPK-------VVERMKKYFDIL-GDPA 286 (415)
Q Consensus 233 ~~~~~i~~~s~sK~~~~~----G~r~G~~~~~~~~~~~--------------~~~~-------~~~~~~~~~~~~-~~~~ 286 (415)
.| |++++ +|.||.| |.-.|++.+++.- .. ++.. --+.+++.+.++ .+.+
T Consensus 249 AD---I~vg~-~Q~fg~p~~~GGP~~G~~a~~~~l-~r~lPGRiVG~t~D~~G~~~~~ltLqtREQHIrReKAtSNIctn 323 (429)
T PF02347_consen 249 AD---IVVGE-HQTFGIPMGFGGPGAGFFAVREDL-VRQLPGRIVGQTKDADGKRAFVLTLQTREQHIRREKATSNICTN 323 (429)
T ss_dssp -S---EEEEC-CTTTT---CCC-S--EEEEE-GGG-GGGS-S-EEEEEEBCCCSCCEEEE-GGGTCHHHGCCSTT---SS
T ss_pred cc---EEeeC-CCCCcccCCCCCCCeeeEEEhhhh-hhhCCCceecccccccccceeeeccccccccccccchhhhhhhh
Confidence 54 66765 8887653 5668888886521 00 0000 001222222212 2222
Q ss_pred -hHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCccccCCCCCHHHHHHHHHh
Q 014936 287 -TFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAK 365 (415)
Q Consensus 287 -~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~ 365 (415)
.+...++..++..+..+.+++..++...++.++.+.|++..+.. + ....+|=++.... .. ....++++
T Consensus 324 qaL~A~~a~~Yl~~~G~~GL~~iA~~~~~~A~yl~~~L~~~~~~~-~--~~~~f~e~v~~~~-------~~-~~~~~l~~ 392 (429)
T PF02347_consen 324 QALLALAAAIYLAYLGPEGLREIAERIHLNAHYLAERLKKIYGLP-F--DNPFFFEFVVVFS-------KD-KEVEELLK 392 (429)
T ss_dssp -HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCTTBEC-S--SSSSBSSEEEEES-------S--HHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHhcCcc-c--CCCCceeeeeecC-------Cc-HHHHHHHH
Confidence 22223344445445578999999999999999999999873443 2 2333322221211 11 22223332
Q ss_pred hcCeEEEcCCCCCCCCeEEEEee--CChhhHHHHHHHH
Q 014936 366 EESVIILPGTAVGLKNWLRVTFA--VDPYSLEECLDRI 401 (415)
Q Consensus 366 ~~gi~v~~g~~~~~~~~iRi~~~--~~~~~l~~~l~~l 401 (415)
+ ++.-.-+..+...+++-+++. .++++|+.+++.|
T Consensus 393 ~-~~~~gl~~~~~~~~~~li~~TE~~t~edid~lv~~f 429 (429)
T PF02347_consen 393 R-GIEGGLNLRYPDDGALLICVTETRTKEDIDRLVEAF 429 (429)
T ss_dssp T-T----EEEGGG-SSEEEEE--TT--HHHHHHHHH--
T ss_pred H-HHhcCCCccccCCCeEEEEccCCCCHHHHHHHHhcC
Confidence 2 333211111222458888884 6789999988764
No 379
>COG1921 SelA Selenocysteine synthase [seryl-tRNASer selenium transferase] [Amino acid transport and metabolism]
Probab=99.18 E-value=3.3e-09 Score=96.06 Aligned_cols=225 Identities=19% Similarity=0.122 Sum_probs=152.2
Q ss_pred CCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHH-HHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEE
Q 014936 51 FHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRR-AIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILL 129 (415)
Q Consensus 51 ~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~-~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~ 129 (415)
....+++++++........-..|.-..|...-|- .+++.+. + ....+.++++++.+.++..++.++.. +.+|++
T Consensus 37 s~~~~e~iea~~~~~~~~v~Le~~l~~g~~~~R~~~~~~~~~---~-~~~aea~~ivnnn~aAVll~~~al~~-~~EvVi 111 (395)
T COG1921 37 SLYSPEAIEAMKEAMRAPVELETDLKTGKRGARLTELAELLC---G-LTGAEAAAIVNNNAAAVLLTLNALAE-GKEVVV 111 (395)
T ss_pred ccCCHHHHHHHHHHhcccceeeeecccchhhHHHHHHHHHHh---c-ccchhheeeECCcHHHHHHHHhhhcc-CCeEEE
Confidence 3456889999988877542224433233222222 3333332 2 23467899999999999999999876 444443
Q ss_pred c-----CCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhh
Q 014936 130 P-----RPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANK 204 (415)
Q Consensus 130 ~-----~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~ 204 (415)
. +++++++.+..+..|++++.+... ......+++.++.+++.+++-++-+|- |+.-. =.+++++++|++
T Consensus 112 s~g~lV~gg~~~v~d~~~~aG~~l~EvG~t----n~t~~~d~~~AIne~ta~llkV~s~~~-~f~~~-l~~~~l~~ia~~ 185 (395)
T COG1921 112 SRGELVEGGAFRVPDIIRLAGAKLVEVGTT----NRTHLKDYELAINENTALLLKVHSSNY-GFTGM-LSEEELVEIAHE 185 (395)
T ss_pred EccccccCCCCChhHHHHHcCCEEEEeccc----CcCCHHHHHHHhccCCeeEEEEeeccc-ccccc-ccHHHHHHHHHH
Confidence 2 268888999999999999988642 235789999999999999887776653 33311 135668888889
Q ss_pred cCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhh-ccccC
Q 014936 205 LKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKY-FDILG 283 (415)
Q Consensus 205 ~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 283 (415)
+|+++++|.+.+...-...........+.+ ++++|-.|. +.|.+.|.+++.+ +++++++.. .....
T Consensus 186 ~~lpvivD~aSg~~v~~e~~l~~~la~GaD---LV~~SgdKl--lgGPqaGii~GkK--------elI~~lq~~~l~Ral 252 (395)
T COG1921 186 KGLPVIVDLASGALVDKEPDLREALALGAD---LVSFSGDKL--LGGPQAGIIVGKK--------ELIEKLQSHPLKRAL 252 (395)
T ss_pred cCCCEEEecCCccccccccchhHHHhcCCC---EEEEecchh--cCCCccceEechH--------HHHHHHHhhhhhhhh
Confidence 999999999987765322222233334444 778899998 4577789998866 788888776 33345
Q ss_pred CchhHHHHHHHHhhCC
Q 014936 284 DPATFIQAAVPSILQQ 299 (415)
Q Consensus 284 ~~~~~~~~a~~~~l~~ 299 (415)
.......+++.++|+.
T Consensus 253 rv~K~tla~l~~aLe~ 268 (395)
T COG1921 253 RVDKETLAALEAALEL 268 (395)
T ss_pred hcCcHhHHHHHHHHHH
Confidence 5666777777777664
No 380
>PF06838 Met_gamma_lyase: Methionine gamma-lyase ; InterPro: IPR009651 This family represents the aluminium resistance protein, which confers resistance to aluminium in bacteria [].; PDB: 3JZL_A 3I16_C 3GWP_A 3FD0_B 3HT4_F.
Probab=99.17 E-value=2e-09 Score=95.47 Aligned_cols=197 Identities=22% Similarity=0.248 Sum_probs=118.3
Q ss_pred HHHHHHHHHHHhc------CCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEE---eCChHHHHHHHHHHhcCCCC
Q 014936 55 HVATEAVAEALLS------EKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFV---TSGCTQAIDVAMALLSRPGA 125 (415)
Q Consensus 55 ~~~~~a~~~~~~~------~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i---~~g~~~al~~~~~~l~~~gd 125 (415)
..|.+|+++.-.. .+.+.|.+ .|-..|.+-.|+.+ ..+..++ .-++|+|+.+++..+++|||
T Consensus 27 ~KVL~Af~~~~vs~~hf~~tTGYGY~D-~GRd~le~iyA~vf--------gaE~ALVRpq~vSGTHAi~~~Lfg~LrpGD 97 (403)
T PF06838_consen 27 LKVLKAFQENRVSDSHFAGTTGYGYDD-IGRDKLERIYADVF--------GAEDALVRPQFVSGTHAIALALFGVLRPGD 97 (403)
T ss_dssp HHHHHHHHHTT--GGGCS---TT-TT--HHHHHHHHHHHHHC--------T-SEEEEETTS-SHHHHHHHHHHHH--TT-
T ss_pred HHHHHHHHHcCCChhhcCCCCcCCCCC-ccHHHHHHHHHHHh--------CchhhhhcccccchHHHHHHHHHhcCCCCC
Confidence 4566666654221 12234444 35556666666665 2444444 34679999999999999999
Q ss_pred EEEEc-CCCCcchHHH----------HHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCC-CCccccCCCHH
Q 014936 126 NILLP-RPGFPIYELS----------AAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINP-GNPCGNVYSYQ 193 (415)
Q Consensus 126 ~vi~~-~p~y~~~~~~----------~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p-~nptG~~~~~~ 193 (415)
+.+.. -.-|...... ++.+|+....+++.+ +..+|.+.+++++++++++++|... ...+-..++.+
T Consensus 98 ~ll~~tG~PYDTL~~VIG~~g~~~GSL~e~Gi~Y~~v~L~~--dg~~D~~~i~~~~~~~tk~v~IQRSrGYs~R~sl~i~ 175 (403)
T PF06838_consen 98 ELLSITGKPYDTLEEVIGIRGNGPGSLKEFGIKYREVPLTE--DGTIDWEAIKKALKPNTKMVLIQRSRGYSWRPSLTIE 175 (403)
T ss_dssp EEEESSSS--CCHHHHHTSSSSSSSSTGGGT-EEEE--B-T--TSSB-HHHHHHHHHTTEEEEEEE-S-TTSSS----HH
T ss_pred eEEEcCCCchhhHHHHhCCCCCCCCChHHhCceeEEEeecC--CCCcCHHHHHHhhccCceEEEEecCCCCCCCCCCCHH
Confidence 99854 3444444433 345677888888754 3469999999999999999988754 33344458889
Q ss_pred HHHHHHHHHhhc--CcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCc--eEEEEEeeCCCCCCChH
Q 014936 194 HLQKLAETANKL--KTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGW--RLGWFVTTDPCGMFRKP 269 (415)
Q Consensus 194 ~l~~i~~~~~~~--~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~--r~G~~~~~~~~~~~~~~ 269 (415)
+++++++++++. ++++++|.+|+.|.-. ..+ ...+.+ ++.+|+=|.-| .|+ --||++++.
T Consensus 176 ~I~~~i~~vk~~~p~~iifVDNCYGEFvE~--~EP--~~vGAD---l~aGSLIKNpG-GgiAptGGYIaGr~-------- 239 (403)
T PF06838_consen 176 EIKEIIKFVKEINPDVIIFVDNCYGEFVET--QEP--TEVGAD---LMAGSLIKNPG-GGIAPTGGYIAGRK-------- 239 (403)
T ss_dssp HHHHHHHHHHHH-TTSEEEEE-TTTTTTSS--S-G--GGGT-S---EEEEETTSGGG-TTT-SS-EEEEESH--------
T ss_pred HHHHHHHHHHhhCCCeEEEEeCCcceeccc--cCc--cccchh---heeccceeCCC-CCccCcCCEEechH--------
Confidence 999999999875 7899999999997733 221 234444 89999999843 332 258998865
Q ss_pred HHHHHHHhh
Q 014936 270 KVVERMKKY 278 (415)
Q Consensus 270 ~~~~~~~~~ 278 (415)
++++.....
T Consensus 240 ~lVe~~a~R 248 (403)
T PF06838_consen 240 DLVERAAYR 248 (403)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHhh
Confidence 677766554
No 381
>KOG0628 consensus Aromatic-L-amino-acid/L-histidine decarboxylase [Amino acid transport and metabolism]
Probab=99.09 E-value=3.7e-07 Score=83.24 Aligned_cols=323 Identities=10% Similarity=0.045 Sum_probs=189.7
Q ss_pred CCCCcHHHHHHHHHHHhhhCCCC-------CCCCcEEEeCChHHHHHHHHHHhc-------CCC-----------C-EEE
Q 014936 75 PTAGLPLTRRAIAEYLSRDLPYK-------LTPNDVFVTSGCTQAIDVAMALLS-------RPG-----------A-NIL 128 (415)
Q Consensus 75 ~~~g~~~lr~~ia~~~~~~~~~~-------~~~~~i~i~~g~~~al~~~~~~l~-------~~g-----------d-~vi 128 (415)
..+...||+.-+-+|+.+..+.+ ..+..=++..+++++..+++.+.. +.+ + .+.
T Consensus 107 ssPa~TELE~ivmDWL~kml~LP~~Fl~~~~g~GgGviQ~tases~lvallaaR~~~i~~~k~~~p~~~e~~~~~~lV~Y 186 (511)
T KOG0628|consen 107 SSPACTELEVIVMDWLGKMLGLPAEFLSLGLGDGGGVIQGTASESVLVALLAARTEKIEEIKSRPPELHESSVLARLVAY 186 (511)
T ss_pred cCcchHHHHHHHHHHHHHHhcCcHHHhccCCCCCcceEecCcchhHHHHHHHHHHHHHHHhhcCCCcccchhhhhhheEE
Confidence 33467899999999999876643 123344566666677666665532 112 1 456
Q ss_pred EcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCc-----eEEEecCCCCccccCCCHHHHHHHHHHHh
Q 014936 129 LPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNT-----VALVIINPGNPCGNVYSYQHLQKLAETAN 203 (415)
Q Consensus 129 ~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-----~~v~i~~p~nptG~~~~~~~l~~i~~~~~ 203 (415)
..+.+|.+....+...|++.+.++.+. +++++.+.|+++++++. ..++..+- .-||.+ ..+++.+|..+|+
T Consensus 187 ~SDqahssveka~~i~~VklR~l~td~--n~~mr~~~L~~AIe~D~arGlIPf~v~at~-GTT~~c-a~D~l~elg~Vc~ 262 (511)
T KOG0628|consen 187 CSDQAHSSVEKACLIAGVKLRALPTDE--NFGMRGDTLRKAIEEDIARGLIPFFVCATL-GTTSSC-AFDELEELGPVCR 262 (511)
T ss_pred ecCcccchHHHhHhhcceeEEEeeccc--CcCCCHHHHHHHHHHHHhCCCccEEEEEee-cCcccc-ccccHHHhcchhh
Confidence 778999999999999999999998753 78899999999987532 22222222 123332 3378999999999
Q ss_pred hcCcEEEEccccCCcccCCCCcccc-cccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCC----CChHHHHHHHHhh
Q 014936 204 KLKTLVIADEVYGHLVFGDKPFVPM-GVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGM----FRKPKVVERMKKY 278 (415)
Q Consensus 204 ~~~~~li~De~~~~~~~~~~~~~~~-~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~----~~~~~~~~~~~~~ 278 (415)
++|+|+++|.+|++..+.-.....+ ..+...+ -+....||+ ++--+-+..+...+...+ .=+|.+.+.-...
T Consensus 263 ~~glWLHVDAAYAGsa~iCpE~r~l~rGie~aD--Sfn~n~hK~-~~vnfDCs~lWvkd~~~~~~~~~vdp~yL~h~~~~ 339 (511)
T KOG0628|consen 263 EEGLWLHVDAAYAGSAFICPEFRYLMRGIEYAD--SFNFNPHKW-LLVNFDCSPLWVKDGTKLSRAFNVDPLYLKHAYQG 339 (511)
T ss_pred hcCEEEEeehhhccccccCHHHHHHhhcchhhc--cccCChhhe-eEEeeeeecceeecCceeeeeeecChHhhcchhhc
Confidence 9999999999999766554332221 1111111 112234555 333333333333332100 0001111111000
Q ss_pred cc--ccCCchhHH--HHHHHHh--hCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCccccCC
Q 014936 279 FD--ILGDPATFI--QAAVPSI--LQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLDD 352 (415)
Q Consensus 279 ~~--~~~~~~~~~--~~a~~~~--l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~~~ 352 (415)
.. .....-|++ ..++..+ ++...-+.+++++++..+..+.+.+.+.+-+.++++..+.=|+ +.+++...+
T Consensus 340 ~~~Dyrhwqipl~rRfRSLKlWfv~R~~Gve~lq~~iR~h~~La~~fe~lv~~d~~FE~~~~~~lgL-vcFRlk~~N--- 415 (511)
T KOG0628|consen 340 SAPDYRHWQIPLGRRFRSLKLWFVLRSYGVENLQNYIREHVRLAKEFETLVRADPRFEIVNKRILGL-VCFRLKGDN--- 415 (511)
T ss_pred cCCCccccccccccchhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhcCCcceeecccccce-eEEeecCCc---
Confidence 00 000001111 1122211 2222235667777777778888887777767788543333344 444665421
Q ss_pred CCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEee---CChhhHHHHHHHHHHHHHHHHH
Q 014936 353 IIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFA---VDPYSLEECLDRIKSFYQRHAK 410 (415)
Q Consensus 353 ~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~---~~~~~l~~~l~~l~~~~~~~~~ 410 (415)
...+.++.++-...+|.+.|.+.-+ .-.+|++++ ++.++++.+.+.|.+....+..
T Consensus 416 -~~ne~Ll~~in~~g~i~l~~~~l~g-k~vlRf~V~s~~t~~~di~~a~~~I~~~a~~l~~ 474 (511)
T KOG0628|consen 416 -EINEALLNRLNSSGRIHLVPASLHG-KFVLRFAVCSPLTNESDIDEAWKIIFEAADELFE 474 (511)
T ss_pred -HHHHHHHHHHHhcCcEEEEEeeecc-eEEEEEEecCCCCcHHHHHHHHHHHHHHHHHHHh
Confidence 2466778888777889998876533 346899993 5679999999999998887544
No 382
>COG3033 TnaA Tryptophanase [Amino acid transport and metabolism]
Probab=99.04 E-value=6.5e-08 Score=85.27 Aligned_cols=312 Identities=14% Similarity=0.115 Sum_probs=192.9
Q ss_pred CCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCC-----CEEEEcCCCCcchH-HHHHhCC
Q 014936 72 GYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPG-----ANILLPRPGFPIYE-LSAAFRH 145 (415)
Q Consensus 72 ~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~g-----d~vi~~~p~y~~~~-~~~~~~g 145 (415)
.|.-..++..|++++.+.+ .-+.++-|.-|..|=++++..+.++| .+.++++..|.... ...+..|
T Consensus 74 AYagsrs~~~L~~avkdif--------Gfq~~iPthQGRgAE~Il~~i~ik~~~~~pg~~~~~~sN~~FdTTr~h~~~ng 145 (471)
T COG3033 74 AYAGSRSYYALADAVKDIF--------GFQYTIPTHQGRGAENILIPILIKKGEQEPGSKMVAFSNYHFDTTRGHIQING 145 (471)
T ss_pred hhcccccHHHHHHHHHHhc--------CceeeeeccCCccHHHHHHHHHhhhccccCCccccccccceecchhHHHHhcC
Confidence 6776778889999999987 34788889988888888888877544 45556666666443 3456677
Q ss_pred CeEEEeeccCCC--------CCCCChhHHHhhcCC----CceEEEecCC-CCccccCCCHHHHHHHHHHHhhcCcEEEEc
Q 014936 146 IEVRHFDLLPDK--------GWEVDLDDIESLADQ----NTVALVIINP-GNPCGNVYSYQHLQKLAETANKLKTLVIAD 212 (415)
Q Consensus 146 ~~~~~~~~~~~~--------~~~~~~~~l~~~~~~----~~~~v~i~~p-~nptG~~~~~~~l~~i~~~~~~~~~~li~D 212 (415)
..++.++++... ...+|++.|++.+++ +...|+++.. |...|+..|.+-+++..++|++|++.++.|
T Consensus 146 ~~~~n~~~~ea~d~~~~~pFKGd~D~~kLe~lidevG~~nvp~I~~tiT~NsagGQpVSm~n~r~v~~ia~ky~ipvv~D 225 (471)
T COG3033 146 ATPRNVYVDEAFDTEVKYPFKGNFDLEKLERLIDEVGADNVPYIVLTITNNSAGGQPVSMANMKAVYEIAKKYDIPVVMD 225 (471)
T ss_pred CccccccccccccccccCCCCCccCHHHHHHHHHHhCcccCcEEEEEEeccccCCCcchHHhHHHHHHHHHHcCCcEEee
Confidence 777666653211 135789999998865 3344554444 457899999999999999999999999999
Q ss_pred cccC-CcccC-CCC-----ccccccc-----CCCCCeEEEccCccccCCCCceE-EEEEeeCCCCCCChHHHHHHHHhhc
Q 014936 213 EVYG-HLVFG-DKP-----FVPMGVF-----GSTVPILTLGSLSKRWIVPGWRL-GWFVTTDPCGMFRKPKVVERMKKYF 279 (415)
Q Consensus 213 e~~~-~~~~~-~~~-----~~~~~~~-----~~~~~~i~~~s~sK~~~~~G~r~-G~~~~~~~~~~~~~~~~~~~~~~~~ 279 (415)
.+.. .-++- ... ..++..+ .-.+ -+..|.-|- ++.- + |+++.++ ...+ ++....+...
T Consensus 226 a~RfaENaYFIk~rE~gYrd~sI~~IarEm~sYaD--~~~mS~KKD-~lvn--mGGfl~~~D-~~~f---Dvy~~~~~~~ 296 (471)
T COG3033 226 AARFAENAYFIKQREPGYRDWSIEEIAREMYSYAD--GCTMSAKKD-GLVN--MGGFLCFKD-DSFF---DVYEECRTLV 296 (471)
T ss_pred hhhhhhhhhhhhhcCcccccccHHHHHHHHHhhhh--hheeecccc-ceec--cccEEEecC-ccHH---HHHHHHHhhe
Confidence 8742 11111 111 1111111 0011 234466677 4322 3 4455444 2222 3444444332
Q ss_pred c------ccCCchhHHHHHHHHhhCCCc-HHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCc----c
Q 014936 280 D------ILGDPATFIQAAVPSILQQPD-EVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNL----S 348 (415)
Q Consensus 280 ~------~~~~~~~~~~~a~~~~l~~~~-~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~----~ 348 (415)
. ..++.+.-.+.+++.-|.+.. .+|+..+..+. ++|.+.|++. |+. +..|.+|.-++++..+ -
T Consensus 297 V~~eG~~tYGgl~GrdmealAvGL~e~~~~~yl~~Rv~Qv----~YL~~~l~~~-GVp-i~~paGGHavfvda~~~lphi 370 (471)
T COG3033 297 VVQEGFPTYGGLAGRDMEALAVGLREGVNFDYLAHRVAQV----QYLADGLEEA-GVP-IVQPAGGHAVFVDAGKFLPHI 370 (471)
T ss_pred EeeccccccCcccchhHHHHHHHHHHhcCcHHHHHHHHHH----HHHHHHHHhc-CCe-eEecCCCceEEeehhhhcCCC
Confidence 1 123334445556655565432 46666665554 5667777776 787 4488888888876422 1
Q ss_pred ccCCCCCHHHHHHHHHhhcCeEEEcCCCCC--C-----------CCeEEEEee---CChhhHHHHHHHHHHHHHH
Q 014936 349 LLDDIIDDIDFCFKLAKEESVIILPGTAVG--L-----------KNWLRVTFA---VDPYSLEECLDRIKSFYQR 407 (415)
Q Consensus 349 ~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~--~-----------~~~iRi~~~---~~~~~l~~~l~~l~~~~~~ 407 (415)
+-+.. ....+..+|-++.||-..--..|. . -.-+|+++. .+.+.++-.++.++++.+.
T Consensus 371 p~eqF-paqala~ely~e~GiRavElG~~~~~rd~ktg~q~~~~~elvRltipRrtYt~~HmD~V~~a~~~l~e~ 444 (471)
T COG3033 371 PAEQF-PAQALACELYKEAGIRAVELGSFSLGRDPKTGKQHPPPAELVRLTIPRRTYTQTHMDFVIEAFKALKEN 444 (471)
T ss_pred ChhhC-cHHHHHHHHHHHhCeeeeeeeceecccCCCccccCCCchheeeEeccccccchhHHHHHHHHHHHHHhc
Confidence 11111 466788888888999765433322 1 146999992 4788899998888877664
No 383
>KOG0629 consensus Glutamate decarboxylase and related proteins [Amino acid transport and metabolism]
Probab=98.96 E-value=2.3e-08 Score=89.89 Aligned_cols=332 Identities=13% Similarity=0.138 Sum_probs=186.2
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcC-------CC-----
Q 014936 57 ATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSR-------PG----- 124 (415)
Q Consensus 57 ~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~-------~g----- 124 (415)
..+-+.+.++.+. ..|...+...-.++.+-....+-.|+....|.|+--.|+.+.+++..-+--+ .|
T Consensus 118 ag~wlT~t~Ntn~-~TYEiAPvF~lmE~~vl~km~~ivGw~~~~DgIf~pggsisn~Ya~~~Aryk~~Pe~K~~Gm~~~p 196 (510)
T KOG0629|consen 118 AGEWLTSTANTNM-FTYEIAPVFVLMEEEVLAKMREIVGWEEGGDGIFAPGGSISNMYAMNCARYKNFPEVKTKGMFALP 196 (510)
T ss_pred HHHHHHhccCCCC-ceEEecceEEeehHHHHHHHHHHhCCCCCCCceecCCchhHHHHHHHHHHhhcCchhhhhhhhcCC
Confidence 3344444444433 4777666665666666666655566666656666666666666655544211 12
Q ss_pred C-EEEEcCCCCcchHHHHHhCCC---eEEEeeccCCCCCCCChhHHHhhcCCC-ce-EE-EecCC---CCccccCCCHHH
Q 014936 125 A-NILLPRPGFPIYELSAAFRHI---EVRHFDLLPDKGWEVDLDDIESLADQN-TV-AL-VIINP---GNPCGNVYSYQH 194 (415)
Q Consensus 125 d-~vi~~~p~y~~~~~~~~~~g~---~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~-~v-~i~~p---~nptG~~~~~~~ 194 (415)
+ ...+++.+|+++..++..+|+ .+..++.+ ...++.+++||+.+-+. .+ .+ ++++. ...-|.. ++
T Consensus 197 ~lilFtSeesHYSi~kaAa~lg~gtd~c~~v~t~--e~Gkm~~~dLe~kile~k~kg~~Pf~vnaTaGTTV~GAF---Dd 271 (510)
T KOG0629|consen 197 PLILFTSEESHYSIKKAAAFLGLGTDHCIKVKTD--ERGKMIPDDLEKKILEAKAKGGVPFFVNATAGTTVLGAF---DD 271 (510)
T ss_pred cEEEEecccchhhHHHHHHHhccCCceeEEeccc--ccCccchHHHHHHHHHHHhcCCCCeEEEecCCceeeecc---Cc
Confidence 2 345668899999999999984 45556554 33568999999877442 11 11 33333 4455676 89
Q ss_pred HHHHHHHHhhcCcEEEEccccCCcccCCCCcc-cccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHH
Q 014936 195 LQKLAETANKLKTLVIADEVYGHLVFGDKPFV-PMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVE 273 (415)
Q Consensus 195 l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~-~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~ 273 (415)
+..|+++|++|++|+++|.+.++...-..... -+......+ -+.++.+|. ....+.++..+.+.+. +.+
T Consensus 272 L~~iadiC~k~~lWmHvDAAwGGglLmS~k~R~kl~Giera~--SvtwnpHK~-~gaplqCsa~l~r~~g-------ll~ 341 (510)
T KOG0629|consen 272 LNGIADICEKHKLWMHVDAAWGGGLLMSRKHRHKLTGIERAN--SVTWNPHKL-MGAPLQCSAFLTREEG-------LLQ 341 (510)
T ss_pred HHHHHHHHHhcCEEEEeecccccccccChhhHhhccCccccC--ceeecHHHh-hcCcchhhHHHHHHHH-------HHH
Confidence 99999999999999999999987443222211 122221111 345678998 4566777776654322 222
Q ss_pred HHHhhcc-----------cc-CCchhHHHH-------HHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCC
Q 014936 274 RMKKYFD-----------IL-GDPATFIQA-------AVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHK 334 (415)
Q Consensus 274 ~~~~~~~-----------~~-~~~~~~~~~-------a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~ 334 (415)
+-+.... .+ -+..-..|- -+--.++......+++..+++-++++++.+.|++.+++..+..
T Consensus 342 ~Cn~~~A~YLFq~dK~YdvS~DTgdK~iQCGRh~D~FKlWlmwkaKG~~Gfe~~v~k~~~lA~yl~~~lrer~~~~~l~~ 421 (510)
T KOG0629|consen 342 RCNQMSAIYLFQQDKFYDVSYDTGDKAIQCGRHVDVFKLWLMWKAKGTQGFEAQVDKCLRLAEYLYDRLREREGFEMLFE 421 (510)
T ss_pred hhcccchhhhhccCceeecccccccchhhcCccccHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHhcccceehhc
Confidence 2111100 00 011111110 0111222223466888999999999999999998767553433
Q ss_pred --CCCceEEEEecCccccCCCCCHHH-----------HHHHHHhhcCeEEEcCCCCC-CCCeEEEEee---CChhhHHHH
Q 014936 335 --PEGSMAVMLKLNLSLLDDIIDDID-----------FCFKLAKEESVIILPGTAVG-LKNWLRVTFA---VDPYSLEEC 397 (415)
Q Consensus 335 --p~~g~~~~~~l~~~~~~~~~~~~~-----------~~~~ll~~~gi~v~~g~~~~-~~~~iRi~~~---~~~~~l~~~ 397 (415)
|+..++.+-..|.. ..+++.+.+ +-..++ +.|-....-...+ .++++|+.++ .+.++++-+
T Consensus 422 ~~pe~~nv~fw~vp~~-lR~~~~~~e~~~rL~kVaPkIK~~Mm-~~Gt~Mi~YqPl~~~~nffr~v~sn~a~~~ad~dfl 499 (510)
T KOG0629|consen 422 LEPEHVNVCFWYVPPS-LRGWQENPERDSRLVKVAPKIKERMM-KKGTTMIGYQPLGDKPNFFRMVISNPALTEADLDFL 499 (510)
T ss_pred CCCceEEEeeccCchH-hccCcccchhhhHHHhhCcHHHHHHH-hccceeeEecccccccchhheecccchhhhhhHHHH
Confidence 55444433223321 112222111 112222 2344433222222 2578999884 467899999
Q ss_pred HHHHHHHHH
Q 014936 398 LDRIKSFYQ 406 (415)
Q Consensus 398 l~~l~~~~~ 406 (415)
++.|..+-+
T Consensus 500 ldEIerlgq 508 (510)
T KOG0629|consen 500 LDEIERLGQ 508 (510)
T ss_pred HHHHHHhcc
Confidence 998887643
No 384
>KOG1405 consensus 4-aminobutyrate aminotransferase [Amino acid transport and metabolism]
Probab=98.88 E-value=2.8e-07 Score=81.12 Aligned_cols=215 Identities=17% Similarity=0.108 Sum_probs=123.1
Q ss_pred hhHHHhhcCC-----CceEEEecCC-CCcccc-CCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCC-cccccccCCC
Q 014936 163 LDDIESLADQ-----NTVALVIINP-GNPCGN-VYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKP-FVPMGVFGST 234 (415)
Q Consensus 163 ~~~l~~~~~~-----~~~~v~i~~p-~nptG~-~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~-~~~~~~~~~~ 234 (415)
+++++.++.+ .+.+.+|+.| +...|- ..|++..++|.++|++|++.+|+||++.+..-+|.- ......++..
T Consensus 255 l~~Ve~li~~~~~k~~pVaaiIvEPIQsEGGDnhaSp~Ff~kLrdi~~Kh~v~fivDEVQTGgGaTGk~WaHehw~l~~P 334 (484)
T KOG1405|consen 255 LAEVEDLIVKYRKKKKPVAAIIVEPIQSEGGDNHASPDFFRKLRDITKKHGVAFIVDEVQTGGGATGKFWAHEHWNLDSP 334 (484)
T ss_pred HHHHHHHHHHHhhcCCCeEEEEeechhccCCCccCCHHHHHHHHHHHHhcCeEEEeeeeecCCCccCceeeehhcCCCCC
Confidence 5556655532 4677788899 555554 478899999999999999999999999886655431 0111222222
Q ss_pred CCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhhccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHH
Q 014936 235 VPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQ 314 (415)
Q Consensus 235 ~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~ 314 (415)
.-+-+|||-| ..| ||..-.+ ... -+..+.+. ++...|.-...+..+++... -+.+....+.
T Consensus 335 ---pD~vTFSKK~-q~g---Gffh~~~--frp-----n~pYrifN--TWmGdP~k~lll~~vv~~I~---~~~Ll~n~~~ 395 (484)
T KOG1405|consen 335 ---PDVVTFSKKF-QTG---GFFHDEE--FRP-----NEPYRIFN--TWMGDPSKNLLLEEVVQEIK---REDLLNNVAH 395 (484)
T ss_pred ---ccceehhhhh-hcC---ccccCcc--cCC-----CchHHHhh--hhcCChHHHHHHHHHHHHHh---HHHHHHHHHH
Confidence 2233799986 444 5654321 111 11222222 34444444444444544322 2233444444
Q ss_pred HHHHHHHHhhc----CCCCcCCCCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEee--
Q 014936 315 SVDICYNKIKE----IPCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFA-- 388 (415)
Q Consensus 315 ~~~~l~~~l~~----~~~~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~-- 388 (415)
.-+.+.+.|.+ .|+.- -.....|-|+..+++.. ...+.+...++-+||.+.. |+ ...||+..+
T Consensus 396 vG~~l~~gL~~Lq~~~p~~~-~~~RGrGTF~a~d~ps~------~~Rdk~i~~~~~nGv~~GG---Cg-~~siRfRPsLv 464 (484)
T KOG1405|consen 396 VGKALLKGLLELQAKYPGKI-NNLRGRGTFIAWDCPSG------SIRDKLILIARLNGVNLGG---CG-DKSIRFRPSLV 464 (484)
T ss_pred HHHHHHHHHHHHHHhCchhh-hcccccceEEEEeCCCh------HHHHHHHHHHHHcCceecc---cc-cceeeecccee
Confidence 44555555543 45533 22344566777778753 2334444556778988743 23 355676664
Q ss_pred CChhhHHHHHHHHHHHHHH
Q 014936 389 VDPYSLEECLDRIKSFYQR 407 (415)
Q Consensus 389 ~~~~~l~~~l~~l~~~~~~ 407 (415)
..+...+-.++++.+.++.
T Consensus 465 f~~~Ha~i~l~~~~k~l~~ 483 (484)
T KOG1405|consen 465 FRKHHADIFLDIFDKILAG 483 (484)
T ss_pred ehhhhHHHHHHHHHHHhcc
Confidence 5677778888888877653
No 385
>COG0403 GcvP Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain [Amino acid transport and metabolism]
Probab=98.87 E-value=1.2e-05 Score=73.24 Aligned_cols=276 Identities=15% Similarity=0.144 Sum_probs=157.1
Q ss_pred CCCCCcEEEeCChHHHHHHHHHHh---cCCCCEEEEcCCCCcchHHHHH----hCCCeEEEeeccCCCCCCCChhHHHhh
Q 014936 97 KLTPNDVFVTSGCTQAIDVAMALL---SRPGANILLPRPGFPIYELSAA----FRHIEVRHFDLLPDKGWEVDLDDIESL 169 (415)
Q Consensus 97 ~~~~~~i~i~~g~~~al~~~~~~l---~~~gd~vi~~~p~y~~~~~~~~----~~g~~~~~~~~~~~~~~~~~~~~l~~~ 169 (415)
+.+..+-=+.-++|.+=+++..+. .++..+++++.-+|+.+.+.++ ..|.++..++.+ |++.+++.
T Consensus 134 Gm~VANASm~DeaTAaAEAm~ma~r~~k~k~~~~~V~~~vhpqt~~Vl~Tra~~~g~~i~~~~~~-------d~~~l~~~ 206 (450)
T COG0403 134 GLDVANASMLDEATAAAEAMLMAKRVTKKKRNKFLVPKDVHPQTLDVLRTRAEGLGIEIEVVDAD-------DLDDLESA 206 (450)
T ss_pred CCCcccchhhhhHHHHHHHHHHHHHhhcCcCceEEecCCCCHHHHHHHHhhcccCceEEEEeccc-------hhhhhhhc
Confidence 344444444455555545444443 3446899999999998877764 345666665542 67888887
Q ss_pred cCCCceEEEecCCCCccc-cCCCHHHHHHHHHHHhhcCcEEEEc-cccCCcccCCCCcccccccCCCCCeEEEccCcccc
Q 014936 170 ADQNTVALVIINPGNPCG-NVYSYQHLQKLAETANKLKTLVIAD-EVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRW 247 (415)
Q Consensus 170 ~~~~~~~v~i~~p~nptG-~~~~~~~l~~i~~~~~~~~~~li~D-e~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~ 247 (415)
.+..+.++++..|+. .| .. +++++|.+.++++|.++++= +.-+... ..+...++.+ |++++....
T Consensus 207 ~~~~~~gv~vQyP~~-~G~~~---~d~~~l~~~~h~~~al~~v~aDplaL~L-----L~pPGe~GAD---IvvG~~Qrf- 273 (450)
T COG0403 207 DDGDVFGVLVQYPNT-FGIVE---EDLRALIEAAHSAGALVIVAADPLALGL-----LKPPGEFGAD---IVVGSAQRF- 273 (450)
T ss_pred cccCeEEEEEecCCC-CCccc---hhHHHHHHHHhhcCCEEEEEechhHhhc-----cCCccccCCc---eEEecCccc-
Confidence 334678889999984 56 44 77999999999999876642 1111111 1223344544 788876654
Q ss_pred CC----CCceEEEEEeeCCC-------------CCCChHHHH-------HHHHhhcccc-CCchh-HHHHHHHHhhCCCc
Q 014936 248 IV----PGWRLGWFVTTDPC-------------GMFRKPKVV-------ERMKKYFDIL-GDPAT-FIQAAVPSILQQPD 301 (415)
Q Consensus 248 ~~----~G~r~G~~~~~~~~-------------~~~~~~~~~-------~~~~~~~~~~-~~~~~-~~~~a~~~~l~~~~ 301 (415)
|. +|.-+||+.+.++- ...+++.+. +.+++.+.++ -+.+. +...++..++..+.
T Consensus 274 GvPmgfGGPhag~fA~~~~~~R~mPGRlVG~S~D~~G~~A~rLaLQTREQHIRReKATSNICTnQaLlA~~As~y~~~hG 353 (450)
T COG0403 274 GVPMGFGGPHAGYFAVKDEFKRQMPGRLVGVSVDAAGKRAFRLALQTREQHIRREKATSNICTNQALLALAASMYAVYHG 353 (450)
T ss_pred CCCcCCCCcceeeeeEhHhHhhcCCCceeeeeecCCCCchhhhhHHHHHHHHhhhccchhhhHHHHHHHHHHHHHHHHhC
Confidence 54 36778888875421 000111111 1222222222 22222 22223333333355
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCC-CCcCCCCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCC
Q 014936 302 EVFFKKTLNLLKQSVDICYNKIKEIP-CISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLK 380 (415)
Q Consensus 302 ~~~~~~~~~~~~~~~~~l~~~l~~~~-~~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~ 380 (415)
.+.+++...+..+...++.+.|++.. +++ + ... .+|--+.+..+. .....+..+. ...|+-+..-. .
T Consensus 354 p~GLk~iA~r~~~~a~~la~~L~~~~~g~~-~-~~~-~fFdt~~v~~~~----~~~~~l~~~~-~~~G~~L~~~~----~ 421 (450)
T COG0403 354 PQGLKEIAERIHRLAAYLAAGLKEIGAGVE-L-VFD-HFFDTFTVRVPE----EVAEALLAAA-IAGGINLRRVD----A 421 (450)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhhcCCceE-e-ccc-cceeeEEEecch----hHHHHHHHHH-HhcCCceeeec----C
Confidence 78899999999999999999999652 455 2 112 444333332110 0122222222 34466654322 2
Q ss_pred CeEEEEe--eCChhhHHHHHHHHHHH
Q 014936 381 NWLRVTF--AVDPYSLEECLDRIKSF 404 (415)
Q Consensus 381 ~~iRi~~--~~~~~~l~~~l~~l~~~ 404 (415)
..+-+++ .+++++++.+++.+...
T Consensus 422 ~~~~ia~tEt~t~~~i~~l~~~~~~~ 447 (450)
T COG0403 422 DTVLIALTETTTKEDIDALVAAFGGV 447 (450)
T ss_pred CceEEEeecccCHHHHHHHHHHHhhh
Confidence 4566666 35788999988887654
No 386
>PF03841 SelA: L-seryl-tRNA selenium transferase; InterPro: IPR018319 In prokaryotes, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This family describes SelA. A close homologue of SelA is found in Helicobacter pylori, but all other required elements are missing and the protein is shorter at the N terminus than SelA from other species. The trusted cut-off is set above the score generated for Helicobacter pylori putative SelA.; PDB: 2AEV_A 2AEU_A.
Probab=98.84 E-value=3.5e-09 Score=95.15 Aligned_cols=250 Identities=20% Similarity=0.151 Sum_probs=50.4
Q ss_pred CCcHHHHHHHHHHHhcCCCCCCCCCCCc-----HHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCE
Q 014936 52 HTTHVATEAVAEALLSEKFNGYAPTAGL-----PLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGAN 126 (415)
Q Consensus 52 ~~~~~~~~a~~~~~~~~~~~~y~~~~g~-----~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~ 126 (415)
+.++++.+++.+......-..|.-..|. ..+.+.++... ..+..+++++..+|+.+++.++. +|.+
T Consensus 17 ~l~~~a~~a~~~~a~~Y~nLE~dl~~G~Rg~R~~~v~~ll~~lt--------gAeaA~VvNnnaAAv~L~l~~la-~~~E 87 (367)
T PF03841_consen 17 PLSEEAIEAVAEVASGYSNLEYDLETGKRGSRYAHVEELLCELT--------GAEAALVVNNNAAAVLLALNTLA-KGKE 87 (367)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccccccccccccccccccccccccccccccccccccccccccc--------ccccccccccccccccccccccc-cccc
Confidence 3457777777766543221233222121 22333333332 46788888998999999988886 5677
Q ss_pred EEEcCCCC------cchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCc--cccCCCHHHHHHH
Q 014936 127 ILLPRPGF------PIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNP--CGNVYSYQHLQKL 198 (415)
Q Consensus 127 vi~~~p~y------~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~np--tG~~~~~~~l~~i 198 (415)
|++..-.- +.+.+..+..|++++.+-... .-.+++.++++.++|.+++.++++|- .|..-+ -.++++
T Consensus 88 vIvsRGelVeiGgsFRip~vm~~sGa~lvEVGttN----~t~~~Dye~AI~e~Ta~ll~Vh~Sn~~i~GFt~~-~~~~el 162 (367)
T PF03841_consen 88 VIVSRGELVEIGGSFRIPDVMRQSGARLVEVGTTN----RTHLSDYEKAITENTAALLKVHTSNFRIQGFTGE-VSLEEL 162 (367)
T ss_dssp ------------------------------------------------------------------------------HH
T ss_pred ccccccccccccccccccccccccccccccccccc----cccccccccccccccccccccccccccccccccc-ccHHHH
Confidence 77664322 224566777888888876421 34688999999999999999999774 343322 358889
Q ss_pred HHHHhhcCcEEEEccccCCcc----cCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHHH
Q 014936 199 AETANKLKTLVIADEVYGHLV----FGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVER 274 (415)
Q Consensus 199 ~~~~~~~~~~li~De~~~~~~----~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~ 274 (415)
++++++||+++++|-..+.+. ++-...+.+...-...-.++++|-.|.++ |...|.+++.+ +++++
T Consensus 163 ~~la~~~~lp~i~DlgsG~l~dl~~~gl~~Ep~v~~~~~~GaDlV~fSGdKlLG--GPQaGiI~Gkk--------~lI~~ 232 (367)
T PF03841_consen 163 AELAKEHGLPVIVDLGSGLLVDLSPYGLPDEPTVQEYLAAGADLVTFSGDKLLG--GPQAGIIVGKK--------ELIEK 232 (367)
T ss_dssp HHHHHHHT--EEEE-TTHHHHHHHTT----------CCCCT-SEEEEETTSSSS--S-S-EEEEEEH--------HHHHH
T ss_pred HHHHhhcCCcEEEECCCCCCcCcccccCccccHHHHHhhcCCCEEEEECCCcCC--CCCeEEEEeCH--------HHHHH
Confidence 999999999999998874432 11111222333322222377888899855 55689999876 78998
Q ss_pred HHhhc-cccCCchhHHHHHHHHhhCCCcH-----------HHHHHHHHHHHHHHHHHHHHhhc
Q 014936 275 MKKYF-DILGDPATFIQAAVPSILQQPDE-----------VFFKKTLNLLKQSVDICYNKIKE 325 (415)
Q Consensus 275 ~~~~~-~~~~~~~~~~~~a~~~~l~~~~~-----------~~~~~~~~~~~~~~~~l~~~l~~ 325 (415)
++... ....-.......++.+.|+...+ ..+....+.++++.+.+...|+.
T Consensus 233 lk~~pl~RalrvdK~tla~L~atL~~Y~~~~~~~~~ip~l~ml~~~~~~L~~rA~~l~~~l~~ 295 (367)
T PF03841_consen 233 LKKHPLGRALRVDKLTLAALEATLRLYLDPDKAKEEIPTLRMLTQSLEELRARAERLAAQLKA 295 (367)
T ss_dssp HHHHHHTTT-B--HHHHHHHHHHHHH-------------------------------------
T ss_pred HhhCCCcceEeeCHHHHHHHHHHHHHHHHhhcccccccccccccccccccccccccccccccc
Confidence 87652 22344556666666655543211 22333445566666666666654
No 387
>PF05889 SLA_LP_auto_ag: Soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen); InterPro: IPR008829 This family consists of several eukaryotic and archaeal proteins which are related to the Homo sapiens soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen). Autoantibodies are a hallmark of autoimmune hepatitis, but most are not disease specific. Autoantibodies to soluble liver antigen (SLA) and to liver and pancreas antigen (LP) have been described as disease specific, occurring in about 30% of all patients with autoimmune hepatitis []. The function of SLA/LP is unknown, however, it has been suggested that the protein may function as a serine hydroxymethyltransferase and may be an important enzyme in the thus far poorly understood selenocysteine pathway []. The archaeal sequences Q8TXK0 from SWISSPROT and Q8TYR3 from SWISSPROT are annotated as being pyridoxal phosphate-dependent enzymes.; GO: 0016740 transferase activity; PDB: 2E7J_B 2E7I_B 2Z67_C 3HL2_D 3BC8_A 3BCA_A 3BCB_A.
Probab=98.84 E-value=4.9e-07 Score=82.19 Aligned_cols=289 Identities=13% Similarity=0.138 Sum_probs=152.0
Q ss_pred CcEEEeCChH-HHHHHHHHHhc--CCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCC-CCCChhHHHhhcCC---C
Q 014936 101 NDVFVTSGCT-QAIDVAMALLS--RPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKG-WEVDLDDIESLADQ---N 173 (415)
Q Consensus 101 ~~i~i~~g~~-~al~~~~~~l~--~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~-~~~~~~~l~~~~~~---~ 173 (415)
...++++-+| -++.+.+.++. ..++.|+.+.-.+.+...++...|.+++.++...+.+ ...|++.+++.+++ .
T Consensus 75 ~~~~~vP~atgm~l~l~l~~l~~r~~a~~Viw~ridqkSc~kai~~AGl~~~vV~~~~~~d~l~td~~~ie~~i~~~G~~ 154 (389)
T PF05889_consen 75 KSCFVVPMATGMSLTLCLLALRMRPKAKYVIWPRIDQKSCFKAIERAGLEPVVVENVLEGDELITDLEAIEAKIEELGAD 154 (389)
T ss_dssp CEEEEESS-HHHHHHHHHHHHHHHCT--EEEEEEEETHHHHHHHHHTT-EEEEE-EEEETTEEEEHHHHHHHHHHHHCGG
T ss_pred cceEEEecccccHHHHHHHHHhcccCCceEEEeeccccchHHHHHhcCCeEEEeeccCCCCeeeccHHHHHHHHHHhCCC
Confidence 4455555543 34444455553 4678999999888888888999999999988543333 23456777766643 4
Q ss_pred ceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCC-CCcccccccCCCCCeEEEccCccccCCCCc
Q 014936 174 TVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGD-KPFVPMGVFGSTVPILTLGSLSKRWIVPGW 252 (415)
Q Consensus 174 ~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~-~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~ 252 (415)
..+.++++++.--+... +++++|+++|+++|++.|+..+|+.-...- +........+-- .+++.|+-|.|..|-
T Consensus 155 ~iLcvltttscfapr~~--D~i~~IakiC~~~~IPhlvNnAYgvQ~~~~~~~i~~a~~~GRv--da~vqS~dkNF~VPv- 229 (389)
T PF05889_consen 155 NILCVLTTTSCFAPRLP--DDIEEIAKICKEYDIPHLVNNAYGVQSSKCMHLIQQAWRVGRV--DAFVQSTDKNFMVPV- 229 (389)
T ss_dssp GEEEEEEESSTTTTB------HHHHHHHHHHHT--EEEEGTTTTT-HHHHHHHHHHHHHSTC--SEEEEEHHHHHCEES-
T ss_pred CeEEEEEecCccCCCCC--ccHHHHHHHHHHcCCceEEccchhhhHHHHHHHHHHHHhcCCc--ceeeeecCCCEEecC-
Confidence 56777877653333331 459999999999999999999998511000 000000011111 167888999986542
Q ss_pred eEEEEEeeCCCCCCChHHHHHHHHhhccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhc----CCC
Q 014936 253 RLGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKE----IPC 328 (415)
Q Consensus 253 r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~----~~~ 328 (415)
.|.+++.. +|..+..+...+.--...++ .......+|.-+ ...+........+...++.+.|++ . +
T Consensus 230 -Ggai~As~------~~~~i~~vs~~YpGRas~sp-~ld~~itLl~LG-~~g~~~ll~~r~~~f~~l~erl~~~aee~-~ 299 (389)
T PF05889_consen 230 -GGAIMASF------DPSGILAVSKEYPGRASASP-SLDLFITLLSLG-CTGYGALLKERKASFPYLKERLKKWAEEV-G 299 (389)
T ss_dssp -SHEEEEES------SHHHHHHHHHTSHSHBTSHH-HHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHT-T
T ss_pred -CCcEEEec------CHHHHHHHHHHhhhhhhccc-chHHHHHHHHHh-hhHHHHHHHHHHHHHHHHHHHHHHHHHHh-h
Confidence 14444433 34677777665431122222 223333333322 223334444444444444444432 3 2
Q ss_pred CcCCCCCCCceEEEEecCccccCCCC-CHHHHHHHHHhhcCeE----EEcCCCCC-------CCCeEEEEe--eCChhhH
Q 014936 329 ISCPHKPEGSMAVMLKLNLSLLDDII-DDIDFCFKLAKEESVI----ILPGTAVG-------LKNWLRVTF--AVDPYSL 394 (415)
Q Consensus 329 ~~~~~~p~~g~~~~~~l~~~~~~~~~-~~~~~~~~ll~~~gi~----v~~g~~~~-------~~~~iRi~~--~~~~~~l 394 (415)
-.....|....-+.+.++.. .... ...-++-..|...||. +.|+.... ...++-++. +.++||+
T Consensus 300 e~ll~~p~N~is~a~tl~~l--~~~~~k~~~~lgs~Lf~R~VsG~RvV~~~~~~~tsh~~~yp~~Ylt~AsaiG~~~eev 377 (389)
T PF05889_consen 300 ERLLETPRNHISMAFTLDTL--YEISQKDGTFLGSMLFKRGVSGIRVVTPGGKKQTSHSSNYPCPYLTAASAIGMTREEV 377 (389)
T ss_dssp EEBSSSTT-SSEEEEE-TTC--CTCCSSHHHHHHHHHHHTTEESSEEEETSSCEEETTSS--SSSEEEEEE-TT--HHHH
T ss_pred hhhcCCCCCCeeEEEECccc--hhhccchhhhHHHHHHhCCcccceeeccCCCcccccCCCCchHHHHHHHHhCCCHHHH
Confidence 22122455554455555421 1111 2344556666776764 23322211 136888855 6899999
Q ss_pred HHHHHHHHHHHH
Q 014936 395 EECLDRIKSFYQ 406 (415)
Q Consensus 395 ~~~l~~l~~~~~ 406 (415)
+.++++|++.++
T Consensus 378 d~~v~rL~k~i~ 389 (389)
T PF05889_consen 378 DYFVKRLDKIIK 389 (389)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHhC
Confidence 999999998874
No 388
>COG4100 Cystathionine beta-lyase family protein involved in aluminum resistance [Inorganic ion transport and metabolism]
Probab=98.76 E-value=5.9e-07 Score=77.41 Aligned_cols=174 Identities=21% Similarity=0.256 Sum_probs=114.6
Q ss_pred CCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCC-CCcchHH----------H
Q 014936 72 GYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRP-GFPIYEL----------S 140 (415)
Q Consensus 72 ~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p-~y~~~~~----------~ 140 (415)
+|.+ -|-.-|.+..|+-++. ....-+.-+.+ +|.|+..++..+++|||+.+...- -|....+ .
T Consensus 61 GydD-~GRdtLe~vyA~vf~a----E~a~VRpq~is-GTHAI~~aLfg~LRpgDell~i~G~PYDTLeevIG~rg~~~gS 134 (416)
T COG4100 61 GYDD-LGRDTLERVYAQVFGA----EAALVRPQIIS-GTHAIACALFGILRPGDELLYITGSPYDTLEEVIGLRGEGQGS 134 (416)
T ss_pred Cccc-cchhHHHHHHHHHhcc----ccceeeeeeec-chhHHHHHHHhccCCCCeEEEecCCcchhHHHHhccCCCCccc
Confidence 3444 5767777777777632 11112334444 589999999999999999875432 2333332 2
Q ss_pred HHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCC-CCccccCCCHHHHHHHHHHHhhc--CcEEEEccccCC
Q 014936 141 AAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINP-GNPCGNVYSYQHLQKLAETANKL--KTLVIADEVYGH 217 (415)
Q Consensus 141 ~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p-~nptG~~~~~~~l~~i~~~~~~~--~~~li~De~~~~ 217 (415)
++.+|+....+++.+ +.++|.+.++..+++++|++.|... ....--.++.+++++++++.++. |+++++|.+|+.
T Consensus 135 L~dfgi~Y~~v~Lt~--~gkiD~~~v~~~i~~~tkli~IQRS~GY~~RpS~~I~eI~~~i~~vk~inpn~ivFVDNCYGE 212 (416)
T COG4100 135 LKDFGIKYKAVPLTA--DGKIDIQAVKTAISDRTKLIGIQRSKGYAWRPSLSIAEIEEMITFVKEINPNVIVFVDNCYGE 212 (416)
T ss_pred HHHhCcceeeccccc--CCcccHHHHHHhcCccceEEEEEeccCcCCCCcccHHHHHHHHHHHHhcCCCEEEEEeccchh
Confidence 445667777777754 3469999999999999999887644 22222237779999999999875 689999999999
Q ss_pred cccCCCCcccccccCCCCCeEEEccCccccCCCCc--eEEEEEeeC
Q 014936 218 LVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGW--RLGWFVTTD 261 (415)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~--r~G~~~~~~ 261 (415)
|+-... +. ..+.+ +..+|+-|. ...|+ -.||+.++.
T Consensus 213 FvE~~E-Pt---~vGaD---liAGSLIKN-pGGgiaktGGYiaGk~ 250 (416)
T COG4100 213 FVEEKE-PT---HVGAD---LIAGSLIKN-PGGGIAKTGGYIAGKA 250 (416)
T ss_pred hhhccC-cc---ccchh---hhccceeeC-CCCceeeccceeechH
Confidence 874322 11 22332 677888887 34443 236777644
No 389
>COG1932 SerC Phosphoserine aminotransferase [Coenzyme metabolism / Amino acid transport and metabolism]
Probab=98.75 E-value=4.1e-06 Score=74.84 Aligned_cols=331 Identities=15% Similarity=0.104 Sum_probs=175.8
Q ss_pred cceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCC------CCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCC
Q 014936 35 KKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYA------PTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSG 108 (415)
Q Consensus 35 ~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~------~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g 108 (415)
+.+.||+.|- ...++++.+..++.+.+-...+++ ...-...+-+...+.+++.++++-+-+-+++-.|
T Consensus 4 ~~~~nFsaGP------a~lp~~vL~~a~~e~~~~~g~g~svme~SHRsk~~~~v~~~a~~~lreLl~iPd~Y~VlflqGG 77 (365)
T COG1932 4 PRVYNFSAGP------AALPPEVLQQAQKELLDWNGLGMSVMEISHRSKEFKNVLEEAEKDLRELLNIPDDYKVLFLQGG 77 (365)
T ss_pred CCCCCCCCCc------ccCCHHHHHHHHHHHhhhccCCcceeeeccccHHHHHHHHHHHHHHHHHhCCCCCceEEEEcCc
Confidence 4468899884 344566666666654431110111 1111233333333444444454433334455666
Q ss_pred hHHHHHHHHHHhcCCCCEEEEcCCCCcch-HHHHHhCCCeEEEeecc-CCCC--CCCChhHHHhhcCCCceEEEecCCCC
Q 014936 109 CTQAIDVAMALLSRPGANILLPRPGFPIY-ELSAAFRHIEVRHFDLL-PDKG--WEVDLDDIESLADQNTVALVIINPGN 184 (415)
Q Consensus 109 ~~~al~~~~~~l~~~gd~vi~~~p~y~~~-~~~~~~~g~~~~~~~~~-~~~~--~~~~~~~l~~~~~~~~~~v~i~~p~n 184 (415)
+|....++...|..+...-.+..-.|... ...++..+..+...... ...+ .-++++.+. +..+..-|.+|+-..
T Consensus 78 at~qf~~~p~nLl~~~~~~yv~~g~Ws~~a~~eA~~~~~~~~~~~~~~~~~~~~~iP~~~~~~--~~~~~ayv~~~~NeT 155 (365)
T COG1932 78 ATGQFAMAPMNLLGKRGTDYVDTGAWSEFAIKEAKKVGKQPKLIDARIEEAGYGSIPDLSKWD--FSDNDAYVHFCWNET 155 (365)
T ss_pred cHHHHHHHHHhhhcccCceeEeeeehhHhHHHHHHHhcccccccccceeccCccCCCChhhcc--cCCCccEEEEecCCc
Confidence 79999999999886543212333334321 23344445322211111 1121 122333322 222322255555455
Q ss_pred ccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCC
Q 014936 185 PCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCG 264 (415)
Q Consensus 185 ptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~ 264 (415)
-+|+.++. ...+. .+.++|.|-....+. ....+..++ ++-.+.-|.+|..| ++.++.++
T Consensus 156 i~Gv~v~~--~p~~~-----~~~~~v~D~SS~ils----r~iDvsk~d-----viyagaQKnlGpaG--ltvvIvr~--- 214 (365)
T COG1932 156 ISGVEVPE--LPDIG-----SDGLLVADASSAILS----RPIDVSKYD-----VIYAGAQKNLGPAG--LTVVIVRP--- 214 (365)
T ss_pred ccceEccC--CCCCC-----CCceEEEecccHHhc----CCCChhHcc-----eEEEehhhccCccc--eEEEEEcH---
Confidence 67877652 11111 127889998876643 233343443 55567899999999 88888765
Q ss_pred CCChHHHHHHHHhh--------------ccccCCchhHHHHHHHHhhCCCc-HHHHHHHHHHHHHHHHHHHHHhhcCCCC
Q 014936 265 MFRKPKVVERMKKY--------------FDILGDPATFIQAAVPSILQQPD-EVFFKKTLNLLKQSVDICYNKIKEIPCI 329 (415)
Q Consensus 265 ~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~a~~~~l~~~~-~~~~~~~~~~~~~~~~~l~~~l~~~~~~ 329 (415)
++.++.+.. ..+..+++....+.+...++-.. ...++...++-+++.+.+.+.+++.+-.
T Consensus 215 -----~~l~r~~~~~~P~if~y~~~~~~~s~yNTPptfa~y~~~lv~~Wlk~~GGl~~~~~rn~~ka~~LY~~id~s~fy 289 (365)
T COG1932 215 -----DLLERAESYTLPSIFDYLTHADNGSMYNTPPTFAWYLLGLVFKWLKSQGGLEALEARNQAKAQLLYDWIDKSDFY 289 (365)
T ss_pred -----HHHhcccccCCchHhhchhhhccCCccCCcHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCCcc
Confidence 444444321 11234555555555554443211 2446777788888889999999876322
Q ss_pred cCCCCCC--CceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEe--eCChhhHHHHHHHHHHHH
Q 014936 330 SCPHKPE--GSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTF--AVDPYSLEECLDRIKSFY 405 (415)
Q Consensus 330 ~~~~~p~--~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~--~~~~~~l~~~l~~l~~~~ 405 (415)
.....+. .-+-+.+++... .-+..++..+ +++|+..--| ....+.+|+++ +.+.++++.+++-++.+.
T Consensus 290 ~~~v~~~~RS~mnV~f~~~~~-----~ld~~fv~ea-e~~gl~~lkG--hr~vgGmRasiynA~~~e~veaL~~fm~~f~ 361 (365)
T COG1932 290 RNLVAKANRSRMNVTFTLVDA-----ELDKGFVAEA-EAAGLIYLKG--HRSVGGLRASIYNAVPLEDVEALTDFMDWFE 361 (365)
T ss_pred ccccchhhccceeEEEEcCcH-----HHHHHHHHHH-HHcCCceecc--ccCCCceeeeeecCCCHHHHHHHHHHHHHHH
Confidence 2111221 223344445432 1245666665 4557766556 23356699999 568899999999888877
Q ss_pred HH
Q 014936 406 QR 407 (415)
Q Consensus 406 ~~ 407 (415)
++
T Consensus 362 ~~ 363 (365)
T COG1932 362 ET 363 (365)
T ss_pred Hh
Confidence 65
No 390
>PRK12566 glycine dehydrogenase; Provisional
Probab=98.60 E-value=5.1e-05 Score=77.31 Aligned_cols=269 Identities=13% Similarity=0.116 Sum_probs=153.3
Q ss_pred HHHHHHHHHHhhhCCCCCCCCcEEEeCChHH---HHHHHHHHhcCCCCEEEEcCCCCcchHHHHH----hCCCeEEEeec
Q 014936 81 LTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQ---AIDVAMALLSRPGANILLPRPGFPIYELSAA----FRHIEVRHFDL 153 (415)
Q Consensus 81 ~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~---al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~----~~g~~~~~~~~ 153 (415)
++...|++.. +.+..+--+.-++|+ |+.++.+.-.++..+|+++.-.|+.+...++ ..|++++.
T Consensus 128 e~Qtmi~~Lt------Gm~vaNASl~D~atA~aEA~~ma~~~~~~k~~~~~v~~~~hP~~~~v~~t~~~~~g~~i~~--- 198 (954)
T PRK12566 128 NFQQMTIDLT------GLDLANASLLDEATAAAEAMALAKRVAKSKSNRFFVDEHCHPQTLSVLRTRAEGFGFELVV--- 198 (954)
T ss_pred HHHHHHHHHh------CchhhhhhhccchhHHHHHHHHHHHHhhcCCCEEEECCCCCHHHHHHHHHhhhcCCcEEEE---
Confidence 3444455544 334334334445444 4444443322234689999999988776543 44566553
Q ss_pred cCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCC
Q 014936 154 LPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS 233 (415)
Q Consensus 154 ~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~ 233 (415)
+++++.++.++.++++.+|+. .|.+ +++++|.++++++|.+++ +.+.- +... ...+...++.
T Consensus 199 ----------~~~~~~~~~~~~~v~vq~P~~-~G~i---~d~~~i~~~~h~~gal~~-~~~d~-laL~--ll~~Pge~GA 260 (954)
T PRK12566 199 ----------DAVDNLAAHAVFGALLQYPDT-HGEI---RDLRPLIDQLHGQQALAC-VAADL-LSLL--VLTPPGELGA 260 (954)
T ss_pred ----------cchhhcCCCCEEEEEEECCCC-ceEE---ccHHHHHHHHHHcCCEEE-EEeCH-HHHh--CCCChhhcCC
Confidence 223334445677888889975 7888 789999999999998765 32221 1111 1112234444
Q ss_pred CCCeEEEccCccccCC----CCceEEEEEeeCCCCCCChHHHHHH----------------------------HHhhccc
Q 014936 234 TVPILTLGSLSKRWIV----PGWRLGWFVTTDPCGMFRKPKVVER----------------------------MKKYFDI 281 (415)
Q Consensus 234 ~~~~i~~~s~sK~~~~----~G~r~G~~~~~~~~~~~~~~~~~~~----------------------------~~~~~~~ 281 (415)
+ |++++ ++.||. +|.-.|++.+.+ ++.+. +++.+..
T Consensus 261 D---I~vG~-~Q~fGvp~~~GGP~ag~~a~~~--------~~~R~~PGRivG~s~D~~G~~a~~l~LqtREQHIRReKAt 328 (954)
T PRK12566 261 D---VVLGS-TQRFGVPMGYGGPHAAYFACRD--------DYKRAMPGRIIGVSRDARGNTALRMALQTREQHIRREKAN 328 (954)
T ss_pred c---EEeeC-CCcCCCCCCCCCCCeeeeeehH--------HHHhhCCCCccceeecCCCCeeeehhhhHHHHHhhhcccc
Confidence 4 66664 343443 355688888754 22222 2222222
Q ss_pred cC-CchhH-HHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCccccCCCCCHHHH
Q 014936 282 LG-DPATF-IQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDF 359 (415)
Q Consensus 282 ~~-~~~~~-~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~ 359 (415)
+. +.+.. ...++..++..+..+.+++..++..+++.++.+.|.+. |++ + ....+|--+.+... ....++
T Consensus 329 SNICT~qaL~A~~a~~Y~~~~Gp~Gl~~ia~~~~~~a~~l~~~l~~~-g~~-~--~~~~fF~~~~v~~~-----~~~~~~ 399 (954)
T PRK12566 329 SNICTAQVLLANIAGFYAVYHGPEGLKRIAQRVHRLTAILAAGLEAK-GIK-R--LNRHFFDTLTLEVG-----GAQAAI 399 (954)
T ss_pred chhhHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHhc-CCc-c--ccCCccceEEEEcc-----CCHHHH
Confidence 22 22222 22222223333456788999999999999999999984 887 3 22344543333321 023444
Q ss_pred HHHHHhhcCeEEEcCCCCCCCCeEEEEe--eCChhhHHHHHHHHH
Q 014936 360 CFKLAKEESVIILPGTAVGLKNWLRVTF--AVDPYSLEECLDRIK 402 (415)
Q Consensus 360 ~~~ll~~~gi~v~~g~~~~~~~~iRi~~--~~~~~~l~~~l~~l~ 402 (415)
.... .+.||-++--. ++.+.||+ .++.++++.++..+.
T Consensus 400 ~~~a-~~~~~n~r~~~----~~~~~~s~de~~~~~~~~~~~~~f~ 439 (954)
T PRK12566 400 IESA-EAARINLRILG----RGRLGVSLDETCDEATVARLFDIFL 439 (954)
T ss_pred HHHH-HHCCCeeEEeC----CCeEEEEeCCCCCHHHHHHHHHHhc
Confidence 4444 45688776432 36788888 467899999998884
No 391
>KOG3846 consensus L-kynurenine hydrolase [Amino acid transport and metabolism]
Probab=97.95 E-value=0.0057 Score=53.61 Aligned_cols=327 Identities=13% Similarity=0.064 Sum_probs=174.1
Q ss_pred CcHHHHHHHHHHHhc-CCCCCC-------CCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCC
Q 014936 53 TTHVATEAVAEALLS-EKFNGY-------APTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPG 124 (415)
Q Consensus 53 ~~~~~~~a~~~~~~~-~~~~~y-------~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~g 124 (415)
.++..++.+++-++. .....| |-..+....-..++... +...++|.++++-|..+..++.++.+|-
T Consensus 79 mPK~t~~~~~~eLDkWak~av~gH~~GkvPW~~~De~il~l~~~iV------GA~e~EvavmNsLTvNlh~Ll~sFyKPT 152 (465)
T KOG3846|consen 79 MPKSTRNSINAELDKWAKCAVEGHFKGKVPWVSIDEPILPLLAPIV------GAQENEVAVMNSLTVNLHSLLISFYKPT 152 (465)
T ss_pred CchhhHhHHHHHHHHHHhhhhhcccccccceeecchhhhhhhhhhc------cCCchhhhhHhhhhhHHHHHHHHhcCCc
Confidence 356666667666553 011122 22233445555666665 4577899999999999999999998765
Q ss_pred C---EEEEcCCCCcc----hHHHHHhCCCeEEE--eeccC-CCCCCCChhHHHhhcCCC--c-eEEEecCCCCccccCCC
Q 014936 125 A---NILLPRPGFPI----YELSAAFRHIEVRH--FDLLP-DKGWEVDLDDIESLADQN--T-VALVIINPGNPCGNVYS 191 (415)
Q Consensus 125 d---~vi~~~p~y~~----~~~~~~~~g~~~~~--~~~~~-~~~~~~~~~~l~~~~~~~--~-~~v~i~~p~nptG~~~~ 191 (415)
. +|+++.-.|++ +...++..|..+.. +...| ++...+..+++.+.++.+ . .+|.++..+.-||+.++
T Consensus 153 ekR~KILlE~kaFPSDhYAiesQ~~lhG~~~e~sm~~iePREGEetlRteDILd~IEkngDeiA~v~fSGvqyYTGQ~Fd 232 (465)
T KOG3846|consen 153 EKRFKILLEKKAFPSDHYAIESQCKLHGISPENSMIQIEPREGEETLRTEDILDTIEKNGDEIALVCFSGVQYYTGQYFD 232 (465)
T ss_pred chhhhhhhccCCCCchHHHHHhhhhhcCCChHHheEEecccccccchhHHHHHHHHHhcCCeEEEEEeecceeecccccc
Confidence 3 68877666654 55566777876532 22222 233345677776666543 2 33455666889999976
Q ss_pred HHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHH
Q 014936 192 YQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKV 271 (415)
Q Consensus 192 ~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~ 271 (415)
+.+|-..-...|+++=.|-+|+. |.-+..+..++.+ ..++.--|....+.-.+|.+.+.........|.+
T Consensus 233 ---i~aIT~Agq~kgc~VGfDLAHAv----gNVpL~LHdWgVD---FACWCSYKYlnaGaGgIgGlFvHekh~~~~~prl 302 (465)
T KOG3846|consen 233 ---IGAITFAGQFKGCLVGFDLAHAV----GNVPLQLHDWGVD---FACWCSYKYLNAGAGGIGGLFVHEKHTKESLPRL 302 (465)
T ss_pred ---hhhhhhcccCCCcEechhhhhhh----cCCceEEeecCCc---eEEEeeecccccCCCccceeeeehhhhcchhhHH
Confidence 45555444567888889999987 4444444444443 5666666764322222444444332211111222
Q ss_pred HHHHHhh----------cc--------ccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCC-----
Q 014936 272 VERMKKY----------FD--------ILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPC----- 328 (415)
Q Consensus 272 ~~~~~~~----------~~--------~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~----- 328 (415)
...+..- .. ..++++.....++...|+.-.+..+++.+++---...++...++...+
T Consensus 303 ~GWwgh~~s~RF~Mdnvl~lipGa~GfRiSNPpi~~v~al~~SLe~F~q~~~~~lRkrS~lLTgYleyL~k~~~g~~~~~ 382 (465)
T KOG3846|consen 303 AGWWGHDPSKRFQMDNVLELIPGALGFRISNPPIIDVVALRSSLELFAQFNINELRKRSLLLTGYLEYLLKASKGYKHPL 382 (465)
T ss_pred hhhccCCcchhhhhccccccCccccccccCCCcHhHHHHHHhhHHHHHHhhHHHHhhhhhhHHhHHHHHHHHhcccCchh
Confidence 2222110 00 012333333344444443211111233332222223333333332111
Q ss_pred ------CcCCCCC----CCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEee---CChhhHH
Q 014936 329 ------ISCPHKP----EGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFA---VDPYSLE 395 (415)
Q Consensus 329 ------~~~~~~p----~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~---~~~~~l~ 395 (415)
+. +..| +.|.-+.+.+.. +...++.+| .+.|+.+-- ..++.||+... .+-.++.
T Consensus 383 rt~Kl~~~-IiTP~~~~erGcQLsl~Fss-------p~~~vfqeL-~krGv~~Dk----R~PNvIRvAPvpLYN~f~Dvy 449 (465)
T KOG3846|consen 383 RTEKLFFT-IITPTSTDERGCQLSLYFSS-------PTPKVFQEL-HKRGVIGDK----RRPNVIRVAPVPLYNTFSDVY 449 (465)
T ss_pred hhcceeEE-EeCCcccccccceEEEEeCC-------CchHHHHHH-HHcCeeccc----cCCCceEeecchhhccHHHHH
Confidence 22 1122 234445555542 223445555 667987532 22688999984 4668899
Q ss_pred HHHHHHHHHHHHH
Q 014936 396 ECLDRIKSFYQRH 408 (415)
Q Consensus 396 ~~l~~l~~~~~~~ 408 (415)
.+++.|.+++...
T Consensus 450 ~f~n~L~e~~d~~ 462 (465)
T KOG3846|consen 450 IFVNALNEAMDKL 462 (465)
T ss_pred HHHHHHHHHHHHh
Confidence 9999988887654
No 392
>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]
Probab=97.89 E-value=0.0031 Score=60.68 Aligned_cols=309 Identities=14% Similarity=0.099 Sum_probs=172.8
Q ss_pred CCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCCh-----HHHHHHHHHHh-cCCC----CEEEEcCCCCcchHHHHHhCCC
Q 014936 77 AGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGC-----TQAIDVAMALL-SRPG----ANILLPRPGFPIYELSAAFRHI 146 (415)
Q Consensus 77 ~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~-----~~al~~~~~~l-~~~g----d~vi~~~p~y~~~~~~~~~~g~ 146 (415)
.|+.++-+.+.+++..- ..-|.+.+.+++ ..++. ++++. ..+| ...+++...|......++..|.
T Consensus 578 qGY~~lf~~Le~~Lc~i----TG~D~~s~QPNsGA~GEYaGL~-~IRaY~~~kge~hRnvClIPvSAHGTNPASA~Magm 652 (1001)
T KOG2040|consen 578 QGYQQLFTELEKDLCEI----TGFDSFSLQPNSGAQGEYAGLR-VIRAYLESKGEGHRNVCLIPVSAHGTNPASAAMAGM 652 (1001)
T ss_pred hhHHHHHHHHHHHhhee----ecccceeecCCCCcccchhhHH-HHHHHHHhccCCcceeEEEeecccCCChhhHHhcCC
Confidence 56777777777776431 234666664442 23333 34443 3334 2457788888888889999999
Q ss_pred eEEEeeccCCCCCCCChhHHHhhcCCC---ceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCC
Q 014936 147 EVRHFDLLPDKGWEVDLDDIESLADQN---TVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDK 223 (415)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~l~~~~~~~---~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~ 223 (415)
+++.+..+. +..+|..+|+...+.+ -.++.++-|+. .|+. .+.+.+++++.++||--+..|.+.-....+-.
T Consensus 653 kvvpV~~~~--~G~id~~dLk~kaekh~~~Laa~MvTYPST-~Gvf--E~~i~d~cd~iHehGGQVYlDGANMNAqVGlc 727 (1001)
T KOG2040|consen 653 KVVPVGCDA--NGNIDMVDLKAKAEKHKDNLAALMVTYPST-HGVF--EEGIDDICDIIHEHGGQVYLDGANMNAQVGLC 727 (1001)
T ss_pred EEEEeeccC--CCCccHHHHHHHHHHhhhhhheeEEecccc-cccc--cccHHHHHHHHHhcCCEEEecCCCccceeccc
Confidence 999988754 3458999998766543 35677777764 2333 25689999999999999999988644322211
Q ss_pred CcccccccCCCCCeEEEccCccccCC----CCceEEEEEeeCCC--CCCChHHHHHHHHhh--ccc---c--CCchh---
Q 014936 224 PFVPMGVFGSTVPILTLGSLSKRWIV----PGWRLGWFVTTDPC--GMFRKPKVVERMKKY--FDI---L--GDPAT--- 287 (415)
Q Consensus 224 ~~~~~~~~~~~~~~i~~~s~sK~~~~----~G~r~G~~~~~~~~--~~~~~~~~~~~~~~~--~~~---~--~~~~~--- 287 (415)
.+ ..++.+ |.=-.++|+|.. +|..+|-+.+.+.- ++- ...++...+.. ... + ...+.
T Consensus 728 ~p---Gd~GaD---V~HLNLHKTFcIPHGGGGPg~gPIgVK~HLapfLP-~HpVvs~~~~~~~~~~gsVsaaP~Gsa~IL 800 (1001)
T KOG2040|consen 728 RP---GDIGAD---VCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLP-SHPVVSPGRPEDTSPVGSVSAAPWGSALIL 800 (1001)
T ss_pred CC---cccccc---ceeecccceeeecCCCCCCCCCccchhhhccccCC-CCCccCCCCCCCCCCccceeccCCCcceee
Confidence 11 222322 333356777743 34446666553210 000 00011100000 000 0 00011
Q ss_pred HHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCC--ceEEEEecCcccc-CCCCCHHHHHHHHH
Q 014936 288 FIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEG--SMAVMLKLNLSLL-DDIIDDIDFCFKLA 364 (415)
Q Consensus 288 ~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~--g~~~~~~l~~~~~-~~~~~~~~~~~~ll 364 (415)
+..++..+++.. ..+.+..+...-+.+++.++|+..=.+- +..+.+ +.-+.+++..-+- .++ ...++.++|
T Consensus 801 pISwaYikmMG~---~GL~~as~~AiLNaNYMakRLe~hYkil-~~~~~~~vaHEFIlD~r~fK~~agi-eavDvAKRL- 874 (1001)
T KOG2040|consen 801 PISWAYIKMMGS---GGLKDASKIAILNANYMAKRLESHYKIL-FRGENGLVAHEFILDLRPFKKTAGI-EAVDVAKRL- 874 (1001)
T ss_pred hhHHHHHHHhcc---cccchhhHHHhhhhHHHHHHHhhcccee-EecCCcceeeeeeeechhhccccCC-cHHHHHHHH-
Confidence 122333334332 4455666666678889999998631222 212222 2223444433222 223 466777766
Q ss_pred hhcCeEEEcCCCCCCCCeEEEEe--eCChhhHHHHHHHHHHHHHHHH
Q 014936 365 KEESVIILPGTAVGLKNWLRVTF--AVDPYSLEECLDRIKSFYQRHA 409 (415)
Q Consensus 365 ~~~gi~v~~g~~~~~~~~iRi~~--~~~~~~l~~~l~~l~~~~~~~~ 409 (415)
..+|... |--.+...+.+-|-. +-+.++++++++++-.+-++.+
T Consensus 875 ~DYgFHa-PTmswPV~gtLMIEPTESE~k~ElDRfcdAliSIreEI~ 920 (1001)
T KOG2040|consen 875 MDYGFHA-PTMSWPVAGTLMIEPTESEDKAELDRFCDALISIREEIA 920 (1001)
T ss_pred HhccCCC-CccccccCCceEeccCccccHHHHHHHHHHHHHHHHHHH
Confidence 6788874 333444567888877 4567899999999887766644
No 393
>KOG2790 consensus Phosphoserine aminotransferase [Coenzyme transport and metabolism; Amino acid transport and metabolism]
Probab=97.78 E-value=0.0037 Score=54.13 Aligned_cols=333 Identities=14% Similarity=0.120 Sum_probs=173.6
Q ss_pred CcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCC------CCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeC
Q 014936 34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYA------PTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTS 107 (415)
Q Consensus 34 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~------~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~ 107 (415)
++.++||+.|-.. .+.+-+.++-++.++-... +-+ .......+.+.-...+.+.+.++-+-+-+++..
T Consensus 5 ~~~vvnFaaGPAk-----lp~~VL~e~qkdl~n~~g~-GisV~EmSHRsk~f~kii~~tes~lreLlniPdn~~vlf~QG 78 (370)
T KOG2790|consen 5 PERVVNFAAGPAK-----LPESVLLEAQKDLLNFNGS-GISVMEMSHRSKDFAKIINDTESLLRELLNIPDNYKVLFLQG 78 (370)
T ss_pred ccceeecCCCccc-----CCHHHHHHHHHHhhccCCC-cceEEEecccchhHHHHHHHHHHHHHHHHcCCCceeEEEEeC
Confidence 5678999999532 2345455544444432110 000 011122333333333333344443334455666
Q ss_pred ChHHHHHHHHHHhc--CCC---CEEEEcCCCCcchHHHHHhCCCeEEEeeccCCC-CCCCChhHHHhhcCCCceEEEecC
Q 014936 108 GCTQAIDVAMALLS--RPG---ANILLPRPGFPIYELSAAFRHIEVRHFDLLPDK-GWEVDLDDIESLADQNTVALVIIN 181 (415)
Q Consensus 108 g~~~al~~~~~~l~--~~g---d~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~-~~~~~~~~l~~~~~~~~~~v~i~~ 181 (415)
|+|..+.++...|. +.| |-|++-.++--.+.++.+......+..+..... +--+|.+.++. +++.+.+.+|.
T Consensus 79 GGt~qFaAv~lNL~glK~g~~AdYiVTGsWS~KA~~EAkk~~~~~~V~~~~k~y~ygkvPd~~~w~~--~~da~yvyyCa 156 (370)
T KOG2790|consen 79 GGTGQFAAVPLNLIGLKHGRCADYVVTGSWSAKAAEEAKKYGTPNIVIPKLKSYTYGKVPDPSTWEL--NPDASYVYYCA 156 (370)
T ss_pred CCcccccccchhhhccccCCccceEEeccccHHHHHHHHhhCCceEEeccccccccCcCCChhhccc--CCCccEEEEec
Confidence 77877777776665 344 566665555545444444333334443332221 01134444443 34455677776
Q ss_pred CCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeC
Q 014936 182 PGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTD 261 (415)
Q Consensus 182 p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~ 261 (415)
-....|+-++.-. +-..++.++|.|-+.-++. .+..+..+ -+++.+..|.+|.+| +-.++.++
T Consensus 157 NETVHGVEf~~~P------~~~~~~~vlVaDmSSnflS----rpvDvsk~-----gvi~aGAQKN~G~aG--~Tvvivr~ 219 (370)
T KOG2790|consen 157 NETVHGVEFDFIP------VNDPKGAVLVADMSSNFLS----RPVDVSKF-----GVIFAGAQKNVGPAG--VTVVIVRK 219 (370)
T ss_pred CceeeceecCCCC------CCCCCCceEEEecccchhc----CCccchhc-----ceEEeccccccCccc--cEEEEEeh
Confidence 5555676654322 2235688888887765533 22223223 367778899988888 44555544
Q ss_pred CCCCCChHHHHHHHHhh-------------ccccCCchhHHHHHHHHhhCCCc-HHHHHHHHHHHHHHHHHHHHHhhcCC
Q 014936 262 PCGMFRKPKVVERMKKY-------------FDILGDPATFIQAAVPSILQQPD-EVFFKKTLNLLKQSVDICYNKIKEIP 327 (415)
Q Consensus 262 ~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~a~~~~l~~~~-~~~~~~~~~~~~~~~~~l~~~l~~~~ 327 (415)
+++...... .....+++..+.++..-.++... ...+....+.-.+..+.+.+.+.+..
T Consensus 220 --------dllg~~~~~tP~v~dyk~~~~NnSlyNTpP~f~iy~~~Lv~~~il~~GGl~a~e~~n~~KskllYd~iD~s~ 291 (370)
T KOG2790|consen 220 --------DLLGNALDITPSVLDYKIMDKNNSLYNTPPCFGIYVMGLVFEWILEKGGLAAMEKLNQEKSKLLYDAIDNSN 291 (370)
T ss_pred --------hhhcccccCCccccceeeeccccccccCCCeeeeeehhhHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhcC
Confidence 233222110 11123444444443333332211 13456666666778888999998765
Q ss_pred CCcC-CCCCCC--ceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEe--eCChhhHHHHHHHHH
Q 014936 328 CISC-PHKPEG--SMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTF--AVDPYSLEECLDRIK 402 (415)
Q Consensus 328 ~~~~-~~~p~~--g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~--~~~~~~l~~~l~~l~ 402 (415)
|+.. ...|.. -+-+.+++.+. +-+.+|+....+++=|.+. |. ..-+.+|-|+ +.+-++.+.+++-++
T Consensus 292 gfy~cpVe~~~RS~MNV~Fri~~d-----~Le~eFLkeA~~~~mv~LK-Gh--RSVGGiRASlYNAisv~~~q~L~~~m~ 363 (370)
T KOG2790|consen 292 GFYRCPVEPSVRSRMNVPFRIEKD-----ELEAEFLKEAAKEHMVQLK-GH--RSVGGIRASLYNAISVEEVQKLAAFMK 363 (370)
T ss_pred CeEEcccchhhhhhcccceeecch-----HHHHHHHHHHHHhhhhccc-cc--cccccchhhhhccccHHHHHHHHHHHH
Confidence 6542 222322 23344555432 2356777776665444443 22 2357899999 678889898888888
Q ss_pred HHHHH
Q 014936 403 SFYQR 407 (415)
Q Consensus 403 ~~~~~ 407 (415)
++.+.
T Consensus 364 ~F~k~ 368 (370)
T KOG2790|consen 364 EFQKK 368 (370)
T ss_pred HHHHh
Confidence 77764
No 394
>KOG3843 consensus Predicted serine hydroxymethyltransferase SLA/LP (autoimmune hepatitis marker in humans) [Translation, ribosomal structure and biogenesis]
Probab=97.60 E-value=0.0006 Score=58.20 Aligned_cols=302 Identities=15% Similarity=0.167 Sum_probs=145.9
Q ss_pred CCCCCCCcEEEeCChHHHHHHHHHHhc--CCCC-EEEEcCCCCcchHHHHHhCCCeEEEeeccCCCC-CCCChhHHHhhc
Q 014936 95 PYKLTPNDVFVTSGCTQAIDVAMALLS--RPGA-NILLPRPGFPIYELSAAFRHIEVRHFDLLPDKG-WEVDLDDIESLA 170 (415)
Q Consensus 95 ~~~~~~~~i~i~~g~~~al~~~~~~l~--~~gd-~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~-~~~~~~~l~~~~ 170 (415)
|...-..++++.-.+...+.+.+..+. +|-. .|+-..-.--+.....-..|.+++.+.-..+.+ -.-|++.++..+
T Consensus 71 glhav~nc~vvpl~tgmslslc~~s~r~krpkakyiiw~ridqks~~ksi~~agfepiiie~i~d~d~l~tdleav~~~i 150 (432)
T KOG3843|consen 71 GLHAVANCFVVPLATGMSLSLCFLSLRHKRPKAKYIIWLRIDQKSCFKSIIHAGFEPIIIENILDGDELITDLEAVEAII 150 (432)
T ss_pred hhhhhhceeEEeccccccHHHHHHHHhhcCCcccEEEEEecchHHHHHHHHhcCCCceeeeccccchHHHHhHHHHHHHH
Confidence 333334455544334344455555554 3333 333332222233344455688776665433322 334777777776
Q ss_pred CCCceEEEec-CCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCe-EEEccCccccC
Q 014936 171 DQNTVALVII-NPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPI-LTLGSLSKRWI 248 (415)
Q Consensus 171 ~~~~~~v~i~-~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~-i~~~s~sK~~~ 248 (415)
++...-.++| +.....=..-+++.+++|+.+|..|+++-++..+|+.-.-. -...++.-..-.++ .++.|+-|.|.
T Consensus 151 ee~g~dcilci~sttscfapr~pd~leaiaaica~~diphivnnayglqsee--~i~~iaa~~~~grida~vqsldknf~ 228 (432)
T KOG3843|consen 151 EELGEDCILCIHSTTSCFAPRSPDNLEAIAAICAAHDIPHIVNNAYGLQSEE--CIHKIAAAAECGRIDAFVQSLDKNFM 228 (432)
T ss_pred HHhCCceEEEEeecccccCCCCCchHHHHHHHHHccCchhhhccccccchHH--HHHHHHHHhhhccHHHHHHHhhhcce
Confidence 5532221222 21111111224578999999999999999999999752210 00001111111111 45678999987
Q ss_pred CCCceEEEEEeeCCCCCCChHHHHHHHHhhccccCCchhHHHHHHHHhhCCCcH---HHHHHHHHHHHHHHHHHHHHhhc
Q 014936 249 VPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQAAVPSILQQPDE---VFFKKTLNLLKQSVDICYNKIKE 325 (415)
Q Consensus 249 ~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~---~~~~~~~~~~~~~~~~l~~~l~~ 325 (415)
.|= .|.+++.- +..+++.+.+... ....+.++...+..+|..+.. +.+.+..+.....++.+.+.-+.
T Consensus 229 vpv--ggaiia~f------k~n~iq~iak~yp-grasa~ps~dllitll~~gqn~f~e~~~eqkemf~~l~~ki~~~ae~ 299 (432)
T KOG3843|consen 229 VPV--GGAIIAAF------KDNFIQEIAKMYP-GRASASPSLDLLITLLSLGQNAFKELFGEQKEMFLKLRNKIIKFAEA 299 (432)
T ss_pred eec--chhHhhHh------HHHHHHHHHHhCC-CccccCccHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 652 13444311 1135566655432 112223344444445544332 22334444444444444444433
Q ss_pred CCCCcCCCCCCCceEEEEec---CccccCCCCCHHHHHHHHHhhcCeE---EEcCCCC------------CC------CC
Q 014936 326 IPCISCPHKPEGSMAVMLKL---NLSLLDDIIDDIDFCFKLAKEESVI---ILPGTAV------------GL------KN 381 (415)
Q Consensus 326 ~~~~~~~~~p~~g~~~~~~l---~~~~~~~~~~~~~~~~~ll~~~gi~---v~~g~~~------------~~------~~ 381 (415)
+.. ..+..|+...-....+ ++.+. ....++-.+|..+||. |+|.+.. +. .+
T Consensus 300 ~~e-~l~~~p~n~is~amtl~ti~~~k~----kavt~~gsilfak~isgarvv~~~q~kttieg~ef~~f~sht~e~~~~ 374 (432)
T KOG3843|consen 300 IGE-CLLETPENEISLAMTLKTIDEAKD----KAVTLFGSILFAKGISGARVVPLGQMKTTIEGCEFIGFGSHTNEQHCA 374 (432)
T ss_pred hhh-hhhcCCCchhhhhhhhccCChHHh----hHHHHHHHHHHhccccCceEeeccccceeeeceEEeccccccCcCchh
Confidence 321 1133455543332223 22111 1233445555555653 4443221 11 12
Q ss_pred eEEEEe--eCChhhHHHHHHHHHHHHHHHHHHh
Q 014936 382 WLRVTF--AVDPYSLEECLDRIKSFYQRHAKQL 412 (415)
Q Consensus 382 ~iRi~~--~~~~~~l~~~l~~l~~~~~~~~~~~ 412 (415)
++-+.+ +.++.++++.+++|...++++++++
T Consensus 375 yln~a~aigm~~hdld~~~~rl~~~~a~~~ke~ 407 (432)
T KOG3843|consen 375 YLNAACAIGMKDHDLDEFFNRLDRCLAAFRKEL 407 (432)
T ss_pred HhhHHHhcCCcHhHHHHHHHHHHHHHHHHHHHH
Confidence 444444 4678899999999999999988875
No 395
>PLN02672 methionine S-methyltransferase
Probab=97.12 E-value=0.021 Score=60.14 Aligned_cols=218 Identities=15% Similarity=0.108 Sum_probs=129.8
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhc------CCCCEEEEc
Q 014936 57 ATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLS------RPGANILLP 130 (415)
Q Consensus 57 ~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~------~~gd~vi~~ 130 (415)
....+...+....+..|.++.|...+|..||.|++.+.++++++++|++.++-..|++.+++.+. +.+.+-.++
T Consensus 406 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 485 (1082)
T PLN02672 406 FLAYLASALKGLSYFPCEPPAGSKRFRNLIAGFMRIYHHIPLTPDNVVVFPSRAVAIENALRLFSPRLAIVDEHLTRWLP 485 (1082)
T ss_pred HHHHHHHHHccCCCCCCCCCccchHHHHHHHHHHHHhcCCcCCccceEEeccHHHHHHHHHHhhChHHHhhhhhhhccCC
Confidence 34456667777777899999999999999999999999999999999999999999988887753 333221111
Q ss_pred CCCCcchHHHHHhCC--------CeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHH
Q 014936 131 RPGFPIYELSAAFRH--------IEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETA 202 (415)
Q Consensus 131 ~p~y~~~~~~~~~~g--------~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~ 202 (415)
..|...+...| ..+..+......+ -+-+|.+.+ +++.|+..-... -..+-...+.|.+.+
T Consensus 486 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~--~~~~~~~~~~~~---~~~~~~~~~~~~~~~ 553 (1082)
T PLN02672 486 ----KKWLTSLAIENATSDSKSDDVITVIEAPRQSD---LVIELIKKL--KPQVVVTGMADF---EMRTSTAFEHLLNVT 553 (1082)
T ss_pred ----HHHHhHhhhhcccccCccCCeEEEEeCCCcch---HHHHHHHhC--CCeEEEEeccch---hhhhHHHHHHHHHHH
Confidence 11222222222 2222222111111 122333333 344444333322 223336789999999
Q ss_pred hhcCcEEEEccccCCcccC-CCCccccccc---CCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhh
Q 014936 203 NKLKTLVIADEVYGHLVFG-DKPFVPMGVF---GSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKY 278 (415)
Q Consensus 203 ~~~~~~li~De~~~~~~~~-~~~~~~~~~~---~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~ 278 (415)
++-|.+++.|..-.+-.-. ......+..+ ....+..++.++-|.-..+.+-+.+++.-++ .+...+...
T Consensus 554 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~ 626 (1082)
T PLN02672 554 AEIGARLFLDISDHLELSSLPGSNGVLKYLAGHPLPSHAAIICGLVKNQVYSDLEVAFVISENE-------AVLKALSKT 626 (1082)
T ss_pred HhhCcEEEEehhhheeeccCCCcccHHHHhcCCCCCcchhHhhhhhhccccccceEEEEecCcH-------HHHHHHHHH
Confidence 9999999999875432211 1111112222 2223445666788886779999999997542 355666554
Q ss_pred cc-ccCCchhHHHHHH
Q 014936 279 FD-ILGDPATFIQAAV 293 (415)
Q Consensus 279 ~~-~~~~~~~~~~~a~ 293 (415)
.. ..+..+..+|.-.
T Consensus 627 ~~~~~~~~~~~~~~~~ 642 (1082)
T PLN02672 627 GEVLEGRTAIISQFYY 642 (1082)
T ss_pred HHhhccchHHHHHHHH
Confidence 32 2344555555433
No 396
>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]
Probab=95.45 E-value=3 Score=41.17 Aligned_cols=88 Identities=11% Similarity=0.024 Sum_probs=57.9
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCC
Q 014936 301 DEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLK 380 (415)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~ 380 (415)
..+.+++..+++......+...|++. +-++. .-.+|-.+++... .+.+++..+.++ .+|-++--. +
T Consensus 389 Gp~gL~~IArrvh~~T~~l~~~l~~a-ghel~---~k~fFDTLkI~~~-----~s~~~~l~rA~~-~~iNlr~~e----d 454 (1001)
T KOG2040|consen 389 GPHGLKEIARRVHNLTLILAEGLKNA-GHELQ---HKPFFDTLKIRCG-----CSAEEVLDRAAK-RQINLRLVE----D 454 (1001)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHhhc-chhhc---cccccceEEEEec-----CcHHHHHHHHHh-hcCceEEee----c
Confidence 35778899999999999999999876 55522 2236655555442 135555555544 456544322 5
Q ss_pred CeEEEEe--eCChhhHHHHHHHHH
Q 014936 381 NWLRVTF--AVDPYSLEECLDRIK 402 (415)
Q Consensus 381 ~~iRi~~--~~~~~~l~~~l~~l~ 402 (415)
+.|-+++ ..+++|++.++..+.
T Consensus 455 ~tigvslDETv~~~DvddLl~vf~ 478 (1001)
T KOG2040|consen 455 GTIGVSLDETVTEKDVDDLLWVFN 478 (1001)
T ss_pred CceEEeecccccHHHHHHHHHHHc
Confidence 6788888 467889999888775
No 397
>COG2102 Predicted ATPases of PP-loop superfamily [General function prediction only]
Probab=80.06 E-value=23 Score=30.25 Aligned_cols=98 Identities=17% Similarity=0.230 Sum_probs=62.8
Q ss_pred cEEEeCChHHHHHHHHHHhcCCCCEEE-----Ec-CC--------CCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHH
Q 014936 102 DVFVTSGCTQAIDVAMALLSRPGANIL-----LP-RP--------GFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIE 167 (415)
Q Consensus 102 ~i~i~~g~~~al~~~~~~l~~~gd~vi-----~~-~p--------~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~ 167 (415)
-+.+.|||-.++.++..++. .|-.|. .+ ++ ........++..|+.+......- ...-.+++|.
T Consensus 3 ~~aL~SGGKDS~~Al~~a~~-~G~eV~~Ll~~~p~~~dS~m~H~~n~~~~~~~Ae~~gi~l~~~~~~g--~~e~eve~L~ 79 (223)
T COG2102 3 VIALYSGGKDSFYALYLALE-EGHEVVYLLTVKPENGDSYMFHTPNLELAELQAEAMGIPLVTFDTSG--EEEREVEELK 79 (223)
T ss_pred EEEEEecCcHHHHHHHHHHH-cCCeeEEEEEEecCCCCeeeeeccchHHHHHHHHhcCCceEEEecCc--cchhhHHHHH
Confidence 36788898888887777663 443321 11 11 11122345677888888776532 1223567777
Q ss_pred hhcCC-CceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEE
Q 014936 168 SLADQ-NTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLV 209 (415)
Q Consensus 168 ~~~~~-~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~l 209 (415)
++++. +-..|+ +|.+.+..++..+-++|++.|+..
T Consensus 80 ~~l~~l~~d~iv-------~GaI~s~yqk~rve~lc~~lGl~~ 115 (223)
T COG2102 80 EALRRLKVDGIV-------AGAIASEYQKERVERLCEELGLKV 115 (223)
T ss_pred HHHHhCcccEEE-------EchhhhHHHHHHHHHHHHHhCCEE
Confidence 77654 222333 799999999999999999998763
No 398
>PRK10595 SOS cell division inhibitor; Provisional
Probab=79.30 E-value=33 Score=27.95 Aligned_cols=103 Identities=10% Similarity=0.020 Sum_probs=62.4
Q ss_pred cEEEe---CChHH-HHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEE
Q 014936 102 DVFVT---SGCTQ-AIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVAL 177 (415)
Q Consensus 102 ~i~i~---~g~~~-al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v 177 (415)
++++. +|-.+ .+.=++..+...+.-|+...|-+..+...+...|++...+-.....+..-.+...|++++......
T Consensus 30 Ell~~~~qpg~~e~LLlP~L~~l~~~~rwilwI~PP~~p~~~~L~~~Gl~l~rvl~v~~~~~~d~Lwa~EqaLrsG~~~a 109 (164)
T PRK10595 30 ELVYREDQPMMTQLLLLPLLQQLGQQSRWQLWLTPQQKLSREWLQASGLPLTKVMQLSQLSPCHTVEAMERALRTGNYSV 109 (164)
T ss_pred EEeecCCCchHHHHHHHHHHHHHhccCceEEEECCCCCCCHHHHHHcCCCcccEEEEecCCcHHHHHHHHHHHhhCCCcE
Confidence 55664 34344 222233334455667888888888899999999987654432211111123677788888877777
Q ss_pred EecCCCCccccCCCHHHHHHHHHHHhhcCcE
Q 014936 178 VIINPGNPCGNVYSYQHLQKLAETANKLKTL 208 (415)
Q Consensus 178 ~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~ 208 (415)
++....+ -++.+++++|--.|.+-+..
T Consensus 110 VL~Wlp~----~l~~~~~RRLQlAAe~g~~l 136 (164)
T PRK10595 110 VLGWLPD----ELTEEEHARLVDAAQEGNAM 136 (164)
T ss_pred EEECCcc----cCCHHHHHHHHHHHHhCCCE
Confidence 7777421 24457788887767665543
No 399
>TIGR00623 sula cell division inhibitor SulA. All proteins in this family for which the functions are known are cell division inhibitors. In E. coli, SulA is one of the SOS regulated genes.
Probab=74.84 E-value=41 Score=27.47 Aligned_cols=83 Identities=10% Similarity=-0.001 Sum_probs=54.3
Q ss_pred hcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeec-cCCCCCCCChhHHHhhcCCCceEEEecC-CCCccccCCCHHHHHH
Q 014936 120 LSRPGANILLPRPGFPIYELSAAFRHIEVRHFDL-LPDKGWEVDLDDIESLADQNTVALVIIN-PGNPCGNVYSYQHLQK 197 (415)
Q Consensus 120 l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~l~~~~~~~~~~v~i~~-p~nptG~~~~~~~l~~ 197 (415)
+...+.-|+...|-+..+...+...|++...+-. .+... .-.++..|++++..+...++++ |+. ++.+++++
T Consensus 56 Ls~~~Rwlv~IaPP~~~~~~~L~~~Gl~l~rvlli~~~~~-~d~lwa~EQaLrSG~c~aVL~WLp~~-----l~~~~lRR 129 (168)
T TIGR00623 56 LGQQSRWQLWLTPQQKLSKEWVQSSGLPLTKVMQISQLSP-CNTVESMIRALRTGNYSVVIGWLTDE-----LTEEEHAK 129 (168)
T ss_pred hcccCceEEEECCCCccCHHHHHHcCCChhHEEEEecCCc-hhHHHHHHHHHHhCCCcEEEecCCcc-----CCHHHHHH
Confidence 3445667777777777888899999987654422 11111 1247888999988777777777 532 45577888
Q ss_pred HHHHHhhcCcE
Q 014936 198 LAETANKLKTL 208 (415)
Q Consensus 198 i~~~~~~~~~~ 208 (415)
|--.+..-+.+
T Consensus 130 LqlAA~~G~al 140 (168)
T TIGR00623 130 LVRAAEEGNAM 140 (168)
T ss_pred HHHHHHhCCCe
Confidence 77666655544
No 400
>TIGR03573 WbuX N-acetyl sugar amidotransferase. This enzyme has been implicated in the formation of the acetamido moiety (sugar-NC(=NH)CH3) which is found on some exopolysaccharides and is positively charged at neutral pH. The reaction involves ligation of ammonia with a sugar N-acetyl group, displacing water. In E. coli (O145 strain) and Pseudomonas aeruginosa (O12 strain) this gene is known as wbuX and ifnA respectively and likely acts on sialic acid. In Campylobacter jejuni, the gene is known as pseA and acts on pseudaminic acid in the process of flagellin glycosylation. In other Pseudomonas strains and various organisms it is unclear what the identity of the sugar substrate is, and in fact, the phylogenetic tree of this family sports a considerably deep branching suggestive of possible major differences in substrate structure. Nevertheless, the family is characterized by a conserved tetracysteine motif (CxxC.....[GN]xCxxC) possibly indicative of a metal binding site, as well as an
Probab=66.59 E-value=59 Score=30.28 Aligned_cols=109 Identities=14% Similarity=0.091 Sum_probs=59.8
Q ss_pred CCcEEEeCChHHHHHHHHHHhcCCCCEE--EEcCCCCc------chHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcC
Q 014936 100 PNDVFVTSGCTQAIDVAMALLSRPGANI--LLPRPGFP------IYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLAD 171 (415)
Q Consensus 100 ~~~i~i~~g~~~al~~~~~~l~~~gd~v--i~~~p~y~------~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~ 171 (415)
-|.++-.|||--+..++..+...-|..+ +..++.+. .....++..|++...+.. |.+.+.....
T Consensus 60 yD~iV~lSGGkDSs~la~ll~~~~gl~~l~vt~~~~~~~e~~~~n~~~~~~~lgvd~~~i~~--------d~~~~~~l~~ 131 (343)
T TIGR03573 60 YDCIIGVSGGKDSTYQAHVLKKKLGLNPLLVTVDPGWNTELGVKNLNNLIKKLGFDLHTITI--------NPETFRKLQR 131 (343)
T ss_pred CCEEEECCCCHHHHHHHHHHHHHhCCceEEEEECCCCCCHHHHHHHHHHHHHcCCCeEEEeC--------CHHHHHHHHH
Confidence 5788888998666555533322224333 45566654 234456668888776653 4444433322
Q ss_pred CCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCC
Q 014936 172 QNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGD 222 (415)
Q Consensus 172 ~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~ 222 (415)
.... -..+|..+.. ......+.++|+++|+.+|+..-...-.++|
T Consensus 132 ~~~~--~~~~pc~~c~----~~~~~~l~~~A~~~gi~~Il~G~~~dE~fgG 176 (343)
T TIGR03573 132 AYFK--KVGDPEWPQD----HAIFASVYQVALKFNIPLIIWGENIAEEYGG 176 (343)
T ss_pred HHHh--ccCCCchhhh----hHHHHHHHHHHHHhCCCEEEeCCCHHHhcCC
Confidence 1111 1122322222 1335677888999999999887766544443
No 401
>PF04392 ABC_sub_bind: ABC transporter substrate binding protein; InterPro: IPR007487 ABC transporters belong to the ATP-Binding Cassette (ABC) superfamily, which uses the hydrolysis of ATP to energize diverse biological systems. ABC transporters are minimally constituted of two conserved regions: a highly conserved ATP binding cassette (ABC) and a less conserved transmembrane domain (TMD). These regions can be found on the same protein or on two different ones. Most ABC transporters function as a dimer and therefore are constituted of four domains, two ABC modules and two TMDs. This family contains many hypothetical proteins and some ABC transporter substrate binding proteins.; PDB: 3LFT_A 3LKV_A.
Probab=66.59 E-value=30 Score=31.32 Aligned_cols=142 Identities=18% Similarity=0.178 Sum_probs=66.7
Q ss_pred HHHHHHHHHHHhcCCCCC------CCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEE
Q 014936 55 HVATEAVAEALLSEKFNG------YAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANIL 128 (415)
Q Consensus 55 ~~~~~a~~~~~~~~~~~~------y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi 128 (415)
....+.+++.+....+.. |.+..+..+.-+.+++.+.. ..-+++++.|+..+.. +...+.+. --|+
T Consensus 14 ~~~~~gf~~~L~~~g~~~~~~~~~~~~a~~d~~~~~~~~~~l~~------~~~DlIi~~gt~aa~~-~~~~~~~~-iPVV 85 (294)
T PF04392_consen 14 DDIVRGFKDGLKELGYDEKNVEIEYKNAEGDPEKLRQIARKLKA------QKPDLIIAIGTPAAQA-LAKHLKDD-IPVV 85 (294)
T ss_dssp HHHHHHHHHHHHHTT--CCCEEEEEEE-TT-HHHHHHHHHHHCC------TS-SEEEEESHHHHHH-HHHH-SS--S-EE
T ss_pred HHHHHHHHHHHHHcCCccccEEEEEecCCCCHHHHHHHHHHHhc------CCCCEEEEeCcHHHHH-HHHhcCCC-cEEE
Confidence 556666777776432222 34456667777777776631 3346888888777755 44444431 2343
Q ss_pred E---cCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhc
Q 014936 129 L---PRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKL 205 (415)
Q Consensus 129 ~---~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~ 205 (415)
. .+|....+......-|.++..+... ....-.++.+.+.+....+..++.+|+.+.+ ....+.+.+.++++
T Consensus 86 f~~V~dp~~~~l~~~~~~~~~nvTGv~~~--~~~~~~l~l~~~l~P~~k~igvl~~~~~~~~----~~~~~~~~~~a~~~ 159 (294)
T PF04392_consen 86 FCGVSDPVGAGLVDSLDRPGKNVTGVSER--PPIEKQLELIKKLFPDAKRIGVLYDPSEPNS----VAQIEQLRKAAKKL 159 (294)
T ss_dssp EECES-TTTTTS-S-SSS--SSEEEEEE-----HHHHHHHHHHHSTT--EEEEEEETT-HHH----HHHHHHHHHHHHHT
T ss_pred EEeccChhhhhccccccCCCCCEEEEECC--cCHHHHHHHHHHhCCCCCEEEEEecCCCccH----HHHHHHHHHHHHHc
Confidence 2 2444444433333333444444311 1111123334444332344446777766532 24577777778888
Q ss_pred CcEEE
Q 014936 206 KTLVI 210 (415)
Q Consensus 206 ~~~li 210 (415)
|+-++
T Consensus 160 g~~l~ 164 (294)
T PF04392_consen 160 GIELV 164 (294)
T ss_dssp T-EEE
T ss_pred CCEEE
Confidence 87765
No 402
>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain. This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.
Probab=65.10 E-value=87 Score=26.64 Aligned_cols=96 Identities=22% Similarity=0.188 Sum_probs=55.6
Q ss_pred CCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEE
Q 014936 98 LTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVAL 177 (415)
Q Consensus 98 ~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v 177 (415)
.....+++..||..|...+ ..|.+.|..|.+.+|....-.......| ++..+.- . ...+.+. . ..+
T Consensus 7 l~gk~vlVvGgG~va~rk~-~~Ll~~ga~VtVvsp~~~~~l~~l~~~~-~i~~~~~----~--~~~~dl~-----~-~~l 72 (205)
T TIGR01470 7 LEGRAVLVVGGGDVALRKA-RLLLKAGAQLRVIAEELESELTLLAEQG-GITWLAR----C--FDADILE-----G-AFL 72 (205)
T ss_pred cCCCeEEEECcCHHHHHHH-HHHHHCCCEEEEEcCCCCHHHHHHHHcC-CEEEEeC----C--CCHHHhC-----C-cEE
Confidence 3456888888888887755 4555678788887776653333333333 4444432 1 2223332 2 234
Q ss_pred EecCCCCccccCCCHHHHHHHHHHHhhcCcEEE-Eccc
Q 014936 178 VIINPGNPCGNVYSYQHLQKLAETANKLKTLVI-ADEV 214 (415)
Q Consensus 178 ~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li-~De~ 214 (415)
++..|+++ +.=.++...|++.++++- .|+.
T Consensus 73 Vi~at~d~-------~ln~~i~~~a~~~~ilvn~~d~~ 103 (205)
T TIGR01470 73 VIAATDDE-------ELNRRVAHAARARGVPVNVVDDP 103 (205)
T ss_pred EEECCCCH-------HHHHHHHHHHHHcCCEEEECCCc
Confidence 45555442 234688999999888763 5554
No 403
>KOG0630 consensus Predicted pyridoxal-dependent decarboxylase [Amino acid transport and metabolism]
Probab=64.02 E-value=96 Score=30.04 Aligned_cols=71 Identities=15% Similarity=0.183 Sum_probs=45.9
Q ss_pred HHHHHhCCCeEEEeeccCCCC-----CCCChhHHHhhcCC-----CceEEEecCC-CCccccCCCHHHHHHHHHHHhhcC
Q 014936 138 ELSAAFRHIEVRHFDLLPDKG-----WEVDLDDIESLADQ-----NTVALVIINP-GNPCGNVYSYQHLQKLAETANKLK 206 (415)
Q Consensus 138 ~~~~~~~g~~~~~~~~~~~~~-----~~~~~~~l~~~~~~-----~~~~v~i~~p-~nptG~~~~~~~l~~i~~~~~~~~ 206 (415)
...++.+|+....+...++.+ ..+|.-.+++.+++ ++.++++..- ..-.|+. +-+.+|.++|++++
T Consensus 246 hYaarefGIa~~aI~~~~dhdqgeiegriDhh~feKiideDlaagkkPLilia~iGasi~Gqn---Dmi~kildi~eaha 322 (838)
T KOG0630|consen 246 HYAAREFGIADEAIKPILDHDQGEIEGRIDHHLFEKIIDEDLAAGKKPLILIADIGASICGQN---DMILKILDICEAHA 322 (838)
T ss_pred HHHHHHhCCchhheecccccccccccccccHHHHHHHHHHHHhCCCCCeEEEEeccchhhcch---HHHHHHHHHHHHhh
Confidence 345677887655544333322 36788888887764 3455555443 4456666 88999999999987
Q ss_pred -cEEEE
Q 014936 207 -TLVIA 211 (415)
Q Consensus 207 -~~li~ 211 (415)
+|++.
T Consensus 323 kfWLHa 328 (838)
T KOG0630|consen 323 KFWLHA 328 (838)
T ss_pred heeEee
Confidence 66554
No 404
>PRK10886 DnaA initiator-associating protein DiaA; Provisional
Probab=63.96 E-value=76 Score=26.82 Aligned_cols=41 Identities=24% Similarity=0.344 Sum_probs=28.4
Q ss_pred hHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEE
Q 014936 164 DDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIA 211 (415)
Q Consensus 164 ~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~ 211 (415)
..++...++...+++++. +|.. +.+.++++.++++|+.+|.
T Consensus 101 ~ql~~~~~~gDvli~iS~----SG~s---~~v~~a~~~Ak~~G~~vI~ 141 (196)
T PRK10886 101 KQVRALGHAGDVLLAIST----RGNS---RDIVKAVEAAVTRDMTIVA 141 (196)
T ss_pred HHHHHcCCCCCEEEEEeC----CCCC---HHHHHHHHHHHHCCCEEEE
Confidence 444555555556666665 3333 7799999999999988775
No 405
>COG0296 GlgB 1,4-alpha-glucan branching enzyme [Carbohydrate transport and metabolism]
Probab=59.58 E-value=12 Score=37.60 Aligned_cols=34 Identities=21% Similarity=0.154 Sum_probs=29.8
Q ss_pred CCHHHHHHHHHHHhhcCcEEEEccccCCcccCCC
Q 014936 190 YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDK 223 (415)
Q Consensus 190 ~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~ 223 (415)
-++++++++++-|++.||-||+|=+|.++.-++.
T Consensus 211 GtPedfk~fVD~aH~~GIgViLD~V~~HF~~d~~ 244 (628)
T COG0296 211 GTPEDFKALVDAAHQAGIGVILDWVPNHFPPDGN 244 (628)
T ss_pred CCHHHHHHHHHHHHHcCCEEEEEecCCcCCCCcc
Confidence 3569999999999999999999999999775543
No 406
>COG0074 SucD Succinyl-CoA synthetase, alpha subunit [Energy production and conversion]
Probab=59.52 E-value=38 Score=30.15 Aligned_cols=84 Identities=21% Similarity=0.207 Sum_probs=60.2
Q ss_pred CCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHH
Q 014936 123 PGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETA 202 (415)
Q Consensus 123 ~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~ 202 (415)
+|...+..-|.|....++.+..+++...+-+++. +-.+++.++++..-+.+++..-+ .|..|..++.+.+
T Consensus 43 kgG~~~~g~PVf~tV~EA~~~~~a~~svI~Vp~~----~aadai~EAida~i~liv~ITEg------IP~~D~~~~~~~a 112 (293)
T COG0074 43 KGGQTILGLPVFNTVEEAVKETGANASVIFVPPP----FAADAILEAIDAGIKLVVIITEG------IPVLDMLELKRYA 112 (293)
T ss_pred CCceEEcCccHHHHHHHHHHhhCCCEEEEecCcH----HHHHHHHHHHhCCCcEEEEEeCC------CCHHHHHHHHHHH
Confidence 3456667788888888888888888776666443 35677777887666666655444 3448999999999
Q ss_pred hhcCcEEEEccccC
Q 014936 203 NKLKTLVIADEVYG 216 (415)
Q Consensus 203 ~~~~~~li~De~~~ 216 (415)
++.+..+|==++-+
T Consensus 113 ~~~g~~iiGPncpG 126 (293)
T COG0074 113 REKGTRLIGPNCPG 126 (293)
T ss_pred HhcCCEEECCCCCc
Confidence 99998877554443
No 407
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=59.21 E-value=1.1e+02 Score=26.37 Aligned_cols=95 Identities=15% Similarity=0.092 Sum_probs=51.5
Q ss_pred EEeCC-hHHHHHHHHHHhcCCCCEE-EEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecC
Q 014936 104 FVTSG-CTQAIDVAMALLSRPGANI-LLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIIN 181 (415)
Q Consensus 104 ~i~~g-~~~al~~~~~~l~~~gd~v-i~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~ 181 (415)
+++.+ |..+-. ++.+|..++-.| ++..+.-......++..|++++..+. -|.+.|.++++.-.. ++++.
T Consensus 2 ~V~GatG~~G~~-v~~~L~~~~~~V~~l~R~~~~~~~~~l~~~g~~vv~~d~-------~~~~~l~~al~g~d~-v~~~~ 72 (233)
T PF05368_consen 2 LVTGATGNQGRS-VVRALLSAGFSVRALVRDPSSDRAQQLQALGAEVVEADY-------DDPESLVAALKGVDA-VFSVT 72 (233)
T ss_dssp EEETTTSHHHHH-HHHHHHHTTGCEEEEESSSHHHHHHHHHHTTTEEEES-T-------T-HHHHHHHHTTCSE-EEEES
T ss_pred EEECCccHHHHH-HHHHHHhCCCCcEEEEeccchhhhhhhhcccceEeeccc-------CCHHHHHHHHcCCce-EEeec
Confidence 44443 455533 444444455433 34444433334456678888775543 278999999875444 44444
Q ss_pred CCCccccCCCHHHHHHHHHHHhhcCcEEE
Q 014936 182 PGNPCGNVYSYQHLQKLAETANKLKTLVI 210 (415)
Q Consensus 182 p~nptG~~~~~~~l~~i~~~~~~~~~~li 210 (415)
+... .-..+..+.+++.|++.|+-.+
T Consensus 73 ~~~~---~~~~~~~~~li~Aa~~agVk~~ 98 (233)
T PF05368_consen 73 PPSH---PSELEQQKNLIDAAKAAGVKHF 98 (233)
T ss_dssp SCSC---CCHHHHHHHHHHHHHHHT-SEE
T ss_pred Ccch---hhhhhhhhhHHHhhhccccceE
Confidence 4322 1223567888998988775443
No 408
>COG1184 GCD2 Translation initiation factor 2B subunit, eIF-2B alpha/beta/delta family [Translation, ribosomal structure and biogenesis]
Probab=59.17 E-value=1.4e+02 Score=27.08 Aligned_cols=109 Identities=17% Similarity=0.155 Sum_probs=61.3
Q ss_pred CCCCcEEEeCChHHHHHHHHHHhcCCCC--EEEEc--CCCCcch--HHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcC
Q 014936 98 LTPNDVFVTSGCTQAIDVAMALLSRPGA--NILLP--RPGFPIY--ELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLAD 171 (415)
Q Consensus 98 ~~~~~i~i~~g~~~al~~~~~~l~~~gd--~vi~~--~p~y~~~--~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~ 171 (415)
....++++|.|.+.++..++....+.|. +|++. .|.+.+. ...++..|+++..+. | .+.-..++
T Consensus 117 i~dg~~IlTh~~S~~v~~~l~~A~~~~k~~~V~VtESRP~~eG~~~ak~L~~~gI~~~~I~---------D-sa~~~~~~ 186 (301)
T COG1184 117 IHDGDVILTHSFSKTVLEVLKTAADRGKRFKVIVTESRPRGEGRIMAKELRQSGIPVTVIV---------D-SAVGAFMS 186 (301)
T ss_pred ccCCCEEEEecCcHHHHHHHHHhhhcCCceEEEEEcCCCcchHHHHHHHHHHcCCceEEEe---------c-hHHHHHHH
Confidence 3567999999998888888888877775 55554 4666643 344566787766653 1 11222222
Q ss_pred CCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEE-EccccC
Q 014936 172 QNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVI-ADEVYG 216 (415)
Q Consensus 172 ~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li-~De~~~ 216 (415)
.-.+.++=.+.--.-|.++++-=-..|+..|++.+.+++ +=|.|-
T Consensus 187 ~vd~VivGad~I~~nG~lvnkiGT~~lA~~A~e~~~Pf~v~aesyK 232 (301)
T COG1184 187 RVDKVLVGADAILANGALVNKIGTSPLALAARELRVPFYVVAESYK 232 (301)
T ss_pred hCCEEEECccceecCCcEEeccchHHHHHHHHHhCCCEEEEeeeec
Confidence 222222211221112333333334567777888888766 444443
No 409
>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B ....
Probab=56.63 E-value=82 Score=25.73 Aligned_cols=89 Identities=17% Similarity=0.116 Sum_probs=47.7
Q ss_pred EEEeCC-hHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecC
Q 014936 103 VFVTSG-CTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIIN 181 (415)
Q Consensus 103 i~i~~g-~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~ 181 (415)
|+++.+ |.-+ ..++..|.+.|-+|....-.-..... ..++++...+. .|.+.+.+++.... .++.+-
T Consensus 1 I~V~GatG~vG-~~l~~~L~~~~~~V~~~~R~~~~~~~---~~~~~~~~~d~-------~d~~~~~~al~~~d-~vi~~~ 68 (183)
T PF13460_consen 1 ILVFGATGFVG-RALAKQLLRRGHEVTALVRSPSKAED---SPGVEIIQGDL-------FDPDSVKAALKGAD-AVIHAA 68 (183)
T ss_dssp EEEETTTSHHH-HHHHHHHHHTTSEEEEEESSGGGHHH---CTTEEEEESCT-------TCHHHHHHHHTTSS-EEEECC
T ss_pred eEEECCCChHH-HHHHHHHHHCCCEEEEEecCchhccc---ccccccceeee-------hhhhhhhhhhhhcc-hhhhhh
Confidence 345554 4444 34555565666666554333222222 34455444322 47888998887544 444443
Q ss_pred CCCccccCCCHHHHHHHHHHHhhcCc
Q 014936 182 PGNPCGNVYSYQHLQKLAETANKLKT 207 (415)
Q Consensus 182 p~nptG~~~~~~~l~~i~~~~~~~~~ 207 (415)
+.++. +.+..+.+++.|++.|+
T Consensus 69 ~~~~~----~~~~~~~~~~a~~~~~~ 90 (183)
T PF13460_consen 69 GPPPK----DVDAAKNIIEAAKKAGV 90 (183)
T ss_dssp HSTTT----HHHHHHHHHHHHHHTTS
T ss_pred hhhcc----ccccccccccccccccc
Confidence 32222 25667888888887653
No 410
>cd06568 GH20_SpHex_like A subgroup of the Glycosyl hydrolase family 20 (GH20) catalytic domain found in proteins similar to the N-acetylhexosaminidase from Streptomyces plicatus (SpHex). SpHex catalyzes the hydrolysis of N-acetyl-beta-hexosaminides. An Asp residue within the active site plays a critical role in substrate-assisted catalysis by orienting the 2-acetamido group and stabilizing the transition state. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by solvent or the enzyme, but by the substrate itself. Proteins belonging to this subgroup lack the C-terminal PKD (polycystic kidney disease I)-like domain found in the chitobiases.
Probab=54.51 E-value=30 Score=31.95 Aligned_cols=68 Identities=19% Similarity=0.367 Sum_probs=40.0
Q ss_pred HHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEE
Q 014936 139 LSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVI 210 (415)
Q Consensus 139 ~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li 210 (415)
+.....+.++..+.+..+.+|.+..+..-++-.... ......+.|..++.+++++|++.|+++|+-||
T Consensus 25 d~ma~~KlN~lhlHLtD~~~~rle~~~~P~lt~~ga----~~~~~~~~~~~YT~~di~elv~yA~~rgI~vI 92 (329)
T cd06568 25 DLLALYKLNVLHLHLTDDQGWRIEIKSWPKLTEIGG----STEVGGGPGGYYTQEDYKDIVAYAAERHITVV 92 (329)
T ss_pred HHHHHhCCcEEEEEeecCCcceeeecCccccccccc----ccccCCCCCCcCCHHHHHHHHHHHHHcCCEEE
Confidence 334455666666655444445444333322211100 01112355678999999999999999999887
No 411
>TIGR00262 trpA tryptophan synthase, alpha subunit. Tryptophan synthase catalyzes the last step in the biosynthesis of tryptophan. The alpha chain is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. In bacteria and plants each domain is found on a separate subunit (alpha and beta chains), while in fungi the two domains are fused together on a single multifunctional protein. The signature pattern for trpA contains three conserved acidic residues. [LIVM]-E-[LIVM]-G-x(2)-[FYC]-[ST]-[DE]-[PA]-[LIVMY]-[AGLI]-[DE]-G and this is located between residues 43-58 of the model. The Sulfolobus solfataricus trpA is known to be quite divergent from other known trpA sequences.
Probab=53.15 E-value=1.6e+02 Score=26.02 Aligned_cols=139 Identities=9% Similarity=0.021 Sum_probs=61.4
Q ss_pred cCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCC-hHH
Q 014936 33 NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSG-CTQ 111 (415)
Q Consensus 33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g-~~~ 111 (415)
++-+++-++.--.++.. =-|.++++-..++.++.. ....-+.-+++.+.. . .+....+...+- -..
T Consensus 36 ~Gad~iElGiPfsDP~a---DGpvIq~a~~~al~~G~~-----~~~~~~~v~~ir~~~---~--~~plv~m~Y~Npi~~~ 102 (256)
T TIGR00262 36 AGADALELGVPFSDPLA---DGPTIQAADLRALRAGMT-----PEKCFELLKKVRQKH---P--NIPIGLLTYYNLIFRK 102 (256)
T ss_pred cCCCEEEECCCCCCCCC---cCHHHHHHHHHHHHcCCC-----HHHHHHHHHHHHhcC---C--CCCEEEEEeccHHhhh
Confidence 46666666665433222 236677776666664321 112223333333221 1 122122222221 122
Q ss_pred HHHHHHHHhcCCC-CEEEEcCCCCc---chHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccc
Q 014936 112 AIDVAMALLSRPG-ANILLPRPGFP---IYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCG 187 (415)
Q Consensus 112 al~~~~~~l~~~g-d~vi~~~p~y~---~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG 187 (415)
++...+..+.+.| |.|++++..+. .+...++..|.....+-. |. -+.+.++...+.....+++.+-+.-||
T Consensus 103 G~e~f~~~~~~aGvdgviipDlp~ee~~~~~~~~~~~gl~~i~lv~-P~----T~~eri~~i~~~~~gfiy~vs~~G~TG 177 (256)
T TIGR00262 103 GVEEFYAKCKEVGVDGVLVADLPLEESGDLVEAAKKHGVKPIFLVA-PN----ADDERLKQIAEKSQGFVYLVSRAGVTG 177 (256)
T ss_pred hHHHHHHHHHHcCCCEEEECCCChHHHHHHHHHHHHCCCcEEEEEC-CC----CCHHHHHHHHHhCCCCEEEEECCCCCC
Confidence 3444444554444 56666655443 234455666766543321 21 234555554443332444434345666
Q ss_pred cC
Q 014936 188 NV 189 (415)
Q Consensus 188 ~~ 189 (415)
..
T Consensus 178 ~~ 179 (256)
T TIGR00262 178 AR 179 (256)
T ss_pred Cc
Confidence 53
No 412
>cd01018 ZntC Metal binding protein ZntC. These proteins are predicted to function as initial receptors in ABC transport of metal ions. They belong to the TroA superfamily of helical backbone metal receptor proteins that share a distinct fold and ligand binding mechanism. They are comprised of two globular subdomains connected by a long alpha helix and bind their specific ligands in the cleft between these domains. In addition, many of these proteins possess a metal-binding histidine-rich motif (repetitive HDH sequence).
Probab=52.62 E-value=1.7e+02 Score=26.01 Aligned_cols=74 Identities=16% Similarity=0.218 Sum_probs=40.9
Q ss_pred CCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHH---HhhcCCCceEEEecCCCCccccCCCHHHHHHHH
Q 014936 123 PGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDI---ESLADQNTVALVIINPGNPCGNVYSYQHLQKLA 199 (415)
Q Consensus 123 ~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l---~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~ 199 (415)
++..+++..+. +..+++.+|+++..+.. .+..+++.+| .+.++.....+++.+|+.+. ...+
T Consensus 169 ~~~~~v~~H~a---f~Y~~~~ygl~~~~~~~---~~~eps~~~l~~l~~~ik~~~v~~if~e~~~~~------~~~~--- 233 (266)
T cd01018 169 KQRAFMVYHPA---WGYFARDYGLTQIPIEE---EGKEPSPADLKRLIDLAKEKGVRVVFVQPQFST------KSAE--- 233 (266)
T ss_pred CCCeEEEECch---hHHHHHHcCCEEEecCC---CCCCCCHHHHHHHHHHHHHcCCCEEEEcCCCCc------HHHH---
Confidence 35567775554 45677889999775421 2334555444 44455444446666676544 2233
Q ss_pred HHHhhcCcEEEE
Q 014936 200 ETANKLKTLVIA 211 (415)
Q Consensus 200 ~~~~~~~~~li~ 211 (415)
.++++.|+.++.
T Consensus 234 ~la~~~g~~v~~ 245 (266)
T cd01018 234 AIAREIGAKVVT 245 (266)
T ss_pred HHHHHcCCeEEE
Confidence 344566766543
No 413
>COG0552 FtsY Signal recognition particle GTPase [Intracellular trafficking and secretion]
Probab=51.79 E-value=74 Score=29.23 Aligned_cols=99 Identities=19% Similarity=0.196 Sum_probs=63.0
Q ss_pred HHHHHHHHHHhcCCCCEEEEcC-CCCcc-----hHHHHHhCCCeEEEeeccCCCCCCCChh-----HHHhhcCCCceEEE
Q 014936 110 TQAIDVAMALLSRPGANILLPR-PGFPI-----YELSAAFRHIEVRHFDLLPDKGWEVDLD-----DIESLADQNTVALV 178 (415)
Q Consensus 110 ~~al~~~~~~l~~~gd~vi~~~-p~y~~-----~~~~~~~~g~~~~~~~~~~~~~~~~~~~-----~l~~~~~~~~~~v~ 178 (415)
|..+.-+..-+.+.|-+|++.. -+|.. ...+++..|++++.-+ .+-|+. .++.+...+...|+
T Consensus 153 TTTIaKLA~~l~~~g~~VllaA~DTFRAaAiEQL~~w~er~gv~vI~~~------~G~DpAaVafDAi~~Akar~~Dvvl 226 (340)
T COG0552 153 TTTIAKLAKYLKQQGKSVLLAAGDTFRAAAIEQLEVWGERLGVPVISGK------EGADPAAVAFDAIQAAKARGIDVVL 226 (340)
T ss_pred HhHHHHHHHHHHHCCCeEEEEecchHHHHHHHHHHHHHHHhCCeEEccC------CCCCcHHHHHHHHHHHHHcCCCEEE
Confidence 6677777777778888877664 33321 2234556677765432 123444 45555555555555
Q ss_pred ecCC---CCccccCCCHHHHHHHHHHHhhcC------cEEEEccccCC
Q 014936 179 IINP---GNPCGNVYSYQHLQKLAETANKLK------TLVIADEVYGH 217 (415)
Q Consensus 179 i~~p---~nptG~~~~~~~l~~i~~~~~~~~------~~li~De~~~~ 217 (415)
+-.. ||-+..+ ++|++|.+++++.. ++++.|..-+-
T Consensus 227 iDTAGRLhnk~nLM---~EL~KI~rV~~k~~~~ap~e~llvlDAttGq 271 (340)
T COG0552 227 IDTAGRLHNKKNLM---DELKKIVRVIKKDDPDAPHEILLVLDATTGQ 271 (340)
T ss_pred EeCcccccCchhHH---HHHHHHHHHhccccCCCCceEEEEEEcccCh
Confidence 5544 7888888 99999999998865 56666877543
No 414
>PRK04296 thymidine kinase; Provisional
Probab=51.40 E-value=72 Score=26.67 Aligned_cols=96 Identities=16% Similarity=0.144 Sum_probs=52.5
Q ss_pred hHHHHHHHHHHhcCCCCEEEEcCCCCc---chHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcC---CCceEEEecCC
Q 014936 109 CTQAIDVAMALLSRPGANILLPRPGFP---IYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLAD---QNTVALVIINP 182 (415)
Q Consensus 109 ~~~al~~~~~~l~~~gd~vi~~~p~y~---~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~---~~~~~v~i~~p 182 (415)
++.++..+.++. ..|.+|++..|... .....+...|..+..+.. ...+++.+.+. .+..+|++-..
T Consensus 16 TT~~l~~~~~~~-~~g~~v~i~k~~~d~~~~~~~i~~~lg~~~~~~~~-------~~~~~~~~~~~~~~~~~dvviIDEa 87 (190)
T PRK04296 16 STELLQRAYNYE-ERGMKVLVFKPAIDDRYGEGKVVSRIGLSREAIPV-------SSDTDIFELIEEEGEKIDCVLIDEA 87 (190)
T ss_pred HHHHHHHHHHHH-HcCCeEEEEeccccccccCCcEecCCCCcccceEe-------CChHHHHHHHHhhCCCCCEEEEEcc
Confidence 356666665554 45788887766432 123344444544332211 12233332222 24455666554
Q ss_pred CCccccCCCHHHHHHHHHHHhhcCcEEEEccccCC
Q 014936 183 GNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGH 217 (415)
Q Consensus 183 ~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~ 217 (415)
..++.+++.++++.++..|+.+|+=.-...
T Consensus 88 -----q~l~~~~v~~l~~~l~~~g~~vi~tgl~~~ 117 (190)
T PRK04296 88 -----QFLDKEQVVQLAEVLDDLGIPVICYGLDTD 117 (190)
T ss_pred -----ccCCHHHHHHHHHHHHHcCCeEEEEecCcc
Confidence 346667788899988888888876544433
No 415
>PRK05678 succinyl-CoA synthetase subunit alpha; Validated
Probab=51.11 E-value=50 Score=29.91 Aligned_cols=76 Identities=17% Similarity=0.146 Sum_probs=44.7
Q ss_pred CCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEE
Q 014936 132 PGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIA 211 (415)
Q Consensus 132 p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~ 211 (415)
|+|....+.....+.++..+-+.++ .-++.+++..+...+.+++..-. . +.++-++|.++++++|+.++=
T Consensus 52 ~~y~sv~dlp~~~~~DlAvi~vp~~----~v~~~l~e~~~~gvk~avI~s~G----f--~~~~~~~l~~~a~~~girvlG 121 (291)
T PRK05678 52 PVFNTVAEAVEATGANASVIYVPPP----FAADAILEAIDAGIDLIVCITEG----I--PVLDMLEVKAYLERKKTRLIG 121 (291)
T ss_pred eccCCHHHHhhccCCCEEEEEcCHH----HHHHHHHHHHHCCCCEEEEECCC----C--CHHHHHHHHHHHHHcCCEEEC
Confidence 4455555555431234333332211 24677777777677776655433 2 235556899999999999886
Q ss_pred ccccCC
Q 014936 212 DEVYGH 217 (415)
Q Consensus 212 De~~~~ 217 (415)
=.+.+.
T Consensus 122 PNc~Gi 127 (291)
T PRK05678 122 PNCPGI 127 (291)
T ss_pred CCCCcc
Confidence 666554
No 416
>KOG2741 consensus Dimeric dihydrodiol dehydrogenase [Carbohydrate transport and metabolism; Secondary metabolites biosynthesis, transport and catabolism]
Probab=50.44 E-value=1.3e+02 Score=27.75 Aligned_cols=76 Identities=9% Similarity=0.085 Sum_probs=48.7
Q ss_pred cCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEE
Q 014936 130 PRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLV 209 (415)
Q Consensus 130 ~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~l 209 (415)
..-.|++|.++++.-.+++++++..... ..+-+-.++ .+.|.|+.--|- .++.++.++|++.|+++| .+
T Consensus 57 ~~k~y~syEeLakd~~vDvVyi~~~~~q----H~evv~l~l-~~~K~VL~EKPl-----a~n~~e~~~iveaA~~rg-v~ 125 (351)
T KOG2741|consen 57 NPKAYGSYEELAKDPEVDVVYISTPNPQ----HYEVVMLAL-NKGKHVLCEKPL-----AMNVAEAEEIVEAAEARG-VF 125 (351)
T ss_pred CCccccCHHHHhcCCCcCEEEeCCCCcc----HHHHHHHHH-HcCCcEEecccc-----cCCHHHHHHHHHHHHHcC-cE
Confidence 3446788999999888999888763211 122222222 244556655552 356689999999999998 55
Q ss_pred EEccccC
Q 014936 210 IADEVYG 216 (415)
Q Consensus 210 i~De~~~ 216 (415)
+.|..+.
T Consensus 126 ~meg~~~ 132 (351)
T KOG2741|consen 126 FMEGLWW 132 (351)
T ss_pred EEeeeee
Confidence 5565544
No 417
>PLN00191 enolase
Probab=49.81 E-value=66 Score=31.25 Aligned_cols=99 Identities=9% Similarity=0.063 Sum_probs=59.7
Q ss_pred ChHHHHHHHHHHhcCCCCEEEEcCCCCcch-HHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCcc
Q 014936 108 GCTQAIDVAMALLSRPGANILLPRPGFPIY-ELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPC 186 (415)
Q Consensus 108 g~~~al~~~~~~l~~~gd~vi~~~p~y~~~-~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~npt 186 (415)
++.+++.. +..+.++-+-+.+++|....- ..+.+.... ..+++-.++.+..+++.+++.++.+..-++..-++. .
T Consensus 296 s~~e~i~~-~~~L~~~y~I~~IEDPl~~~D~eg~~~Lt~~--~~ipIvgDE~~vtn~~~l~~~I~~~aad~i~iKl~q-i 371 (457)
T PLN00191 296 SGDELIDL-YKEFVSDYPIVSIEDPFDQDDWEHWAKLTSL--EDVQIVGDDLLVTNPKRVAKAIQEKACNALLLKVNQ-I 371 (457)
T ss_pred CHHHHHHH-HHHHhhcCCcEEEECCCCcccHHHHHHHHcc--CCCcEEccCcccCCHHHHHHHHHhCCCCEEEecccc-c
Confidence 44555554 444555556788999997532 222222211 112222222233568899988877655566666665 3
Q ss_pred ccCCCHHHHHHHHHHHhhcCcEEEEcc
Q 014936 187 GNVYSYQHLQKLAETANKLKTLVIADE 213 (415)
Q Consensus 187 G~~~~~~~l~~i~~~~~~~~~~li~De 213 (415)
|.+ .+..+++++|+.+|+.+++-.
T Consensus 372 GGI---Tea~~~a~lA~~~G~~~~ish 395 (457)
T PLN00191 372 GTV---TESIEAVKMSKAAGWGVMTSH 395 (457)
T ss_pred CCH---HHHHHHHHHHHHCCCEEEeCC
Confidence 444 578899999999999887644
No 418
>TIGR00524 eIF-2B_rel eIF-2B alpha/beta/delta-related uncharacterized proteins. This model, eIF-2B_rel, describes half of a superfamily, where the other half consists of eukaryotic translation initiation factor 2B (eIF-2B) subunits alpha, beta, and delta. It is unclear whether the eIF-2B_rel set is monophyletic, or whether they are all more closely related to each other than to any eIF-2B subunit because the eIF-2B clade is highly derived. Members of this branch of the family are all uncharacterized with respect to function and are found in the Archaea, Bacteria, and Eukarya, although a number are described as putative translation intiation factor components. Proteins found by eIF-2B_rel include at least three clades, including a set of uncharacterized eukaryotic proteins, a set found in some but not all Archaea, and a set universal so far among the Archaea and closely related to several uncharacterized bacterial proteins.
Probab=49.72 E-value=2.1e+02 Score=26.17 Aligned_cols=104 Identities=13% Similarity=0.045 Sum_probs=51.8
Q ss_pred CCCcEEEeCChH--------HHHHHHHHHhcCCC--CEEEEc--CCCCcc---hHHHHHhCCCeEEEeeccCCCCCCCCh
Q 014936 99 TPNDVFVTSGCT--------QAIDVAMALLSRPG--ANILLP--RPGFPI---YELSAAFRHIEVRHFDLLPDKGWEVDL 163 (415)
Q Consensus 99 ~~~~i~i~~g~~--------~al~~~~~~l~~~g--d~vi~~--~p~y~~---~~~~~~~~g~~~~~~~~~~~~~~~~~~ 163 (415)
...++++|.|.+ .....+++...+.| -+|++. .|.+.+ ....+...|+++..++-
T Consensus 117 ~~g~~ILT~~~Sg~lat~~~~tv~~~l~~A~~~g~~~~V~v~EsrP~~~G~~~~a~~L~~~gI~vtlI~D---------- 186 (303)
T TIGR00524 117 KDGDTVLTHCNAGALATSDYGTALGVIRSAWEDGKRIRVIACETRPRNQGSRLTAWELMQDGIDVTLITD---------- 186 (303)
T ss_pred cCCCEEEEecCCccccccCcchHHHHHHHHHHcCCceEEEECCCCCccchHHHHHHHHHHCCCCEEEECh----------
Confidence 345678888765 33333444443333 355555 566655 22344567877776531
Q ss_pred hHHHhhcCC-CceEEEe-cCCCCccccCCCHHHHHHHHHHHhhcCcEEEEc
Q 014936 164 DDIESLADQ-NTVALVI-INPGNPCGNVYSYQHLQKLAETANKLKTLVIAD 212 (415)
Q Consensus 164 ~~l~~~~~~-~~~~v~i-~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D 212 (415)
..+-..++. +...+++ .+.-...|.++..-=-..++-.|+.+++++++=
T Consensus 187 sa~~~~m~~~~vd~VlvGAd~v~~nG~v~nk~GT~~lA~~Ak~~~vPv~V~ 237 (303)
T TIGR00524 187 SMAAYFMQKGEIDAVIVGADRIARNGDVANKIGTYQLAVLAKEFRIPFFVA 237 (303)
T ss_pred hHHHHHccccCCCEEEEcccEEecCCCEeEhhhHHHHHHHHHHhCCCEEEe
Confidence 222333331 2223332 122122333333333356677778889887753
No 419
>cd02742 GH20_hexosaminidase Beta-N-acetylhexosaminidases of glycosyl hydrolase family 20 (GH20) catalyze the removal of beta-1,4-linked N-acetyl-D-hexosamine residues from the non-reducing ends of N-acetyl-beta-D-hexosaminides including N-acetylglucosides and N-acetylgalactosides. These enzymes are broadly distributed in microorganisms, plants and animals, and play roles in various key physiological and pathological processes. These processes include cell structural integrity, energy storage, cellular signaling, fertilization, pathogen defense, viral penetration, the development of carcinomas, inflammatory events and lysosomal storage disorders. The GH20 enzymes include the eukaryotic beta-N-acetylhexosaminidases A and B, the bacterial chitobiases, dispersin B, and lacto-N-biosidase. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by the solvent or the enzyme, but by the substrate itself.
Probab=49.51 E-value=35 Score=31.11 Aligned_cols=67 Identities=28% Similarity=0.453 Sum_probs=38.8
Q ss_pred HHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEE
Q 014936 139 LSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVI 210 (415)
Q Consensus 139 ~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li 210 (415)
+.....+.++..+-+....+|.+..+..-++-+.... .++ .+.|-.++.+++++|++.|+++|+-||
T Consensus 23 d~ma~~K~N~lhlHl~D~~~~~le~~~~p~l~~~g~~----~~~-~~~~~~yT~~di~elv~yA~~rgI~vi 89 (303)
T cd02742 23 DVLARYKINTFHWHLTDDQAWRIESKKFPELAEKGGQ----INP-RSPGGFYTYAQLKDIIEYAAARGIEVI 89 (303)
T ss_pred HHHHHhCCcEEEEeeecCCCceEeeCccchhhhhccc----ccC-CCCCCeECHHHHHHHHHHHHHcCCEEE
Confidence 3344566666666554444454443332222111100 111 234568999999999999999999887
No 420
>COG1105 FruK Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) [Carbohydrate transport and metabolism]
Probab=49.49 E-value=1.6e+02 Score=26.86 Aligned_cols=39 Identities=21% Similarity=0.190 Sum_probs=28.7
Q ss_pred EecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCc
Q 014936 178 VIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHL 218 (415)
Q Consensus 178 ~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~ 218 (415)
++.+.+=|.| ++.+...++++.|++.|..+++|.....+
T Consensus 133 VvlsGSlP~g--~~~d~y~~li~~~~~~g~~vilD~Sg~~L 171 (310)
T COG1105 133 VVLSGSLPPG--VPPDAYAELIRILRQQGAKVILDTSGEAL 171 (310)
T ss_pred EEEeCCCCCC--CCHHHHHHHHHHHHhcCCeEEEECChHHH
Confidence 3334444444 44588999999999999999999876543
No 421
>cd00532 MGS-like MGS-like domain. This domain composes the whole protein of methylglyoxal synthetase, which catalyzes the enolization of dihydroxyacetone phosphate (DHAP) to produce methylglyoxal. The family also includes the C-terminal domain in carbamoyl phosphate synthetase (CPS) where it catalyzes the last phosphorylation of a coaboxyphosphate intermediate to form the product carbamoyl phosphate and may also play a regulatory role. This family also includes inosine monophosphate cyclohydrolase. The known structures in this family show a common phosphate binding site.
Probab=48.87 E-value=1.1e+02 Score=22.89 Aligned_cols=94 Identities=16% Similarity=0.083 Sum_probs=52.1
Q ss_pred HHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCC-CceEEEecCCCCccccCC
Q 014936 112 AIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ-NTVALVIINPGNPCGNVY 190 (415)
Q Consensus 112 al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~v~i~~p~nptG~~~ 190 (415)
.+..++..+.+.|-+++.+. +....++..|+++..+....+++ + .++.+.+.. ...-++++.|. +.-..-
T Consensus 13 ~~~~~a~~l~~~G~~i~AT~----gTa~~L~~~Gi~~~~v~~~~~~g---~-~~i~~~i~~~g~idlVIn~~~-~~~~~~ 83 (112)
T cd00532 13 MLVDLAPKLSSDGFPLFATG----GTSRVLADAGIPVRAVSKRHEDG---E-PTVDAAIAEKGKFDVVINLRD-PRRDRC 83 (112)
T ss_pred HHHHHHHHHHHCCCEEEECc----HHHHHHHHcCCceEEEEecCCCC---C-cHHHHHHhCCCCEEEEEEcCC-CCcccc
Confidence 33344444445566665444 23344556787776654322211 2 344555555 55556666664 111011
Q ss_pred CHHHHHHHHHHHhhcCcEEEEccc
Q 014936 191 SYQHLQKLAETANKLKTLVIADEV 214 (415)
Q Consensus 191 ~~~~l~~i~~~~~~~~~~li~De~ 214 (415)
...+-..|.+.|.++|++++.+-.
T Consensus 84 ~~~dg~~iRR~A~~~~Ip~~T~~~ 107 (112)
T cd00532 84 TDEDGTALLRLARLYKIPVTTPNA 107 (112)
T ss_pred cCCChHHHHHHHHHcCCCEEECHH
Confidence 235678899999999999987743
No 422
>PF02603 Hpr_kinase_N: HPr Serine kinase N terminus; InterPro: IPR011126 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. This entry represents the N-terminal region of Hpr Serine/threonine kinase PtsK. This kinase is the sensor in a multicomponent phosphorelay system in control of carbon catabolic repression in bacteria []. This kinase in unusual in that it recognises the tertiary structure of its target and is a member of a novel family unrelated to any previously described protein phosphorylating enzymes []. X-ray analysis of the full-length crystalline enzyme from Staphylococcus xylosus at a resolution of 1.95 A shows the enzyme to consist of two clearly separated domains that are assembled in a hexameric structure resembling a three-bladed propeller. The blades are formed by two N-terminal domains each, and the compact central hub assembles the C-terminal kinase domains []. ; GO: 0000155 two-component sensor activity, 0004672 protein kinase activity, 0005524 ATP binding, 0000160 two-component signal transduction system (phosphorelay), 0006109 regulation of carbohydrate metabolic process; PDB: 1KNX_B 1KO7_A.
Probab=48.65 E-value=26 Score=27.21 Aligned_cols=39 Identities=21% Similarity=0.301 Sum_probs=23.5
Q ss_pred hHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEE
Q 014936 164 DDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIA 211 (415)
Q Consensus 164 ~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~ 211 (415)
+.+++.++.++.+++++.-..|. +.+.++|++++++++.
T Consensus 72 ~~l~~l~~~~~P~iIvt~~~~~p---------~~l~e~a~~~~ipll~ 110 (127)
T PF02603_consen 72 ERLEKLFSYNPPCIIVTRGLEPP---------PELIELAEKYNIPLLR 110 (127)
T ss_dssp CHHHHHCTTT-S-EEEETTT------------HHHHHHHHHCT--EEE
T ss_pred HHHHHHhCCCCCEEEEECcCCCC---------HHHHHHHHHhCCcEEE
Confidence 34566667788889998765443 6677778899998774
No 423
>KOG1465 consensus Translation initiation factor 2B, beta subunit (eIF-2Bbeta/GCD7) [Translation, ribosomal structure and biogenesis]
Probab=48.31 E-value=2.1e+02 Score=25.91 Aligned_cols=105 Identities=16% Similarity=0.201 Sum_probs=59.5
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCC--EEEEcC--CCCcchHHH--HHhCCCeEEEeeccCCCCCCCChhHHHhhcCC
Q 014936 99 TPNDVFVTSGCTQAIDVAMALLSRPGA--NILLPR--PGFPIYELS--AAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ 172 (415)
Q Consensus 99 ~~~~i~i~~g~~~al~~~~~~l~~~gd--~vi~~~--p~y~~~~~~--~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~ 172 (415)
-..+|++|.|.+..+...+....++|. +|++.+ |.+.++..+ +...|++...++ | .++-..+..
T Consensus 161 hsnEviLT~g~SrTV~~FL~~A~kk~Rkf~viVaE~~p~~qgH~~Ak~la~~giettVI~---------d-aaVfA~Msr 230 (353)
T KOG1465|consen 161 HSNEVILTLGSSRTVENFLKHAAKKGRKFRVIVAEGAPNNQGHELAKPLAQAGIETTVIP---------D-AAVFAMMSR 230 (353)
T ss_pred ccCceEEecCccHHHHHHHHHHHhccCceEEEEeecCCcccchHhhHHHHHcCCeeEEec---------c-HHHHHHhhh
Confidence 456899999999888888888777664 455553 444432222 224566654442 2 333334433
Q ss_pred CceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEcc
Q 014936 173 NTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADE 213 (415)
Q Consensus 173 ~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De 213 (415)
-.|.++-++.--+-|-+....-...++..|+.|-+++++=.
T Consensus 231 VnKVIigt~avl~NGgl~~~~G~~~vAlaAk~h~vPv~VlA 271 (353)
T KOG1465|consen 231 VNKVIIGTHAVLANGGLRAPSGVHTVALAAKHHSVPVIVLA 271 (353)
T ss_pred cceEEEEeeeEecCCCeeccchHHHHHHHHHhcCCcEEEec
Confidence 33444433332222334444445677778888888877643
No 424
>cd06570 GH20_chitobiase-like_1 A functionally uncharacterized subgroup of the Glycosyl hydrolase family 20 (GH20) catalytic domain found in proteins similar to the chitobiase of Serratia marcescens, a beta-N-1,4-acetylhexosaminidase that hydrolyzes the beta-1,4-glycosidic linkages in oligomers derived from chitin. Chitin is degraded by a two step process: i) a chitinase hydrolyzes the chitin to oligosaccharides and disaccharides such as di-N-acetyl-D-glucosamine and chitobiose, ii) chitobiase then further degrades these oligomers into monomers. This subgroup lacks the C-terminal PKD (polycystic kidney disease I)-like domain found in the chitobiases. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by solvent or the enzyme, but by the substrate itself.
Probab=47.93 E-value=42 Score=30.71 Aligned_cols=24 Identities=17% Similarity=0.308 Sum_probs=21.9
Q ss_pred ccCCCHHHHHHHHHHHhhcCcEEE
Q 014936 187 GNVYSYQHLQKLAETANKLKTLVI 210 (415)
Q Consensus 187 G~~~~~~~l~~i~~~~~~~~~~li 210 (415)
|-.++.+++++|++.|+++|+-||
T Consensus 62 ~~~yT~~di~elv~yA~~rgI~vI 85 (311)
T cd06570 62 GLYYTQEQIREVVAYARDRGIRVV 85 (311)
T ss_pred CCccCHHHHHHHHHHHHHcCCEEE
Confidence 567999999999999999999877
No 425
>PRK13937 phosphoheptose isomerase; Provisional
Probab=46.15 E-value=1.7e+02 Score=24.31 Aligned_cols=36 Identities=25% Similarity=0.273 Sum_probs=24.2
Q ss_pred hcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEE
Q 014936 169 LADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIA 211 (415)
Q Consensus 169 ~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~ 211 (415)
.++++..+++++.. |.. .++.++++.|+++|+.+|.
T Consensus 103 ~~~~~Dl~i~iS~s----G~t---~~~~~~~~~ak~~g~~~I~ 138 (188)
T PRK13937 103 LGRPGDVLIGISTS----GNS---PNVLAALEKARELGMKTIG 138 (188)
T ss_pred hCCCCCEEEEEeCC----CCc---HHHHHHHHHHHHCCCeEEE
Confidence 34555555556553 333 7889999999999876653
No 426
>PF03748 FliL: Flagellar basal body-associated protein FliL; InterPro: IPR005503 This FliL protein controls the rotational direction of the flagella during chemotaxis []. FliL is a cytoplasmic membrane protein associated with the basal body [].; GO: 0001539 ciliary or flagellar motility, 0006935 chemotaxis, 0009425 bacterial-type flagellum basal body
Probab=46.00 E-value=25 Score=25.61 Aligned_cols=53 Identities=17% Similarity=0.189 Sum_probs=36.6
Q ss_pred cHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeC
Q 014936 54 THVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTS 107 (415)
Q Consensus 54 ~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~ 107 (415)
.+.+++++...+.......-..+.|...|++.+.+.+++.++ +...++|++|.
T Consensus 43 ~~~ird~ii~~l~~~~~~~l~~~~g~~~Lk~~l~~~in~~l~-~~~V~~V~ft~ 95 (99)
T PF03748_consen 43 MPRIRDAIISYLSSKTAEDLSGPEGKERLKDELKDRINKILG-KGKVKDVYFTD 95 (99)
T ss_pred cHHHHHHHHHHHHcCCHHHhcChhhHHHHHHHHHHHHHHhhc-cCcEEEEEEEE
Confidence 367777777777654433444557899999999999987665 22456777663
No 427
>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=45.97 E-value=1.2e+02 Score=27.31 Aligned_cols=101 Identities=13% Similarity=0.057 Sum_probs=53.5
Q ss_pred CCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcc---hHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCC--
Q 014936 98 LTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPI---YELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ-- 172 (415)
Q Consensus 98 ~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~---~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~-- 172 (415)
+..+-+++|.||+..=..+..-+.+.|.++++-+-.-.+ ..+.++..| ++..+..+-.+. -++..+.+.+++
T Consensus 36 v~g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~~~g-~~~~y~cdis~~--eei~~~a~~Vk~e~ 112 (300)
T KOG1201|consen 36 VSGEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIRKIG-EAKAYTCDISDR--EEIYRLAKKVKKEV 112 (300)
T ss_pred ccCCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHHHHhcC-ceeEEEecCCCH--HHHHHHHHHHHHhc
Confidence 455667777776666556666677888877554333322 333344445 566555533211 123333333332
Q ss_pred CceEEEecCCCC---ccccCCCHHHHHHHHHH
Q 014936 173 NTVALVIINPGN---PCGNVYSYQHLQKLAET 201 (415)
Q Consensus 173 ~~~~v~i~~p~n---ptG~~~~~~~l~~i~~~ 201 (415)
.+.-++++|..= -.....+.+++++..++
T Consensus 113 G~V~ILVNNAGI~~~~~ll~~~d~ei~k~~~v 144 (300)
T KOG1201|consen 113 GDVDILVNNAGIVTGKKLLDCSDEEIQKTFDV 144 (300)
T ss_pred CCceEEEeccccccCCCccCCCHHHHHHHHHH
Confidence 345567777632 22334677777776654
No 428
>cd01422 MGS Methylglyoxal synthase catalyzes the enolization of dihydroxyacetone phosphate (DHAP) to produce methylglyoxal. The first part of the catalytic mechanism is believed to be similar to TIM (triosephosphate isomerase) in that both enzymes utilize DHAP to form an ene-diolate phosphate intermediate. In MGS, the second catalytic step is characterized by the elimination of phosphate and collapse of the enediolate to form methylglyoxal instead of reprotonation to form the isomer glyceraldehyde 3-phosphate, as in TIM. This is the first reaction in the methylglyoxal bypass of the Embden-Myerhoff glycolytic pathway and is believed to provide physiological benefits under non-ideal growth conditions in bacteria.
Probab=45.73 E-value=1.3e+02 Score=22.76 Aligned_cols=63 Identities=16% Similarity=0.185 Sum_probs=36.9
Q ss_pred CCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEE
Q 014936 144 RHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIA 211 (415)
Q Consensus 144 ~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~ 211 (415)
.|+.+..++..+.++ + ..+.+.+......+++..|+ |.|......+-..|.+.|.+++++++.
T Consensus 44 ~Gi~v~~vk~~~~~g---~-~~i~~~i~~g~i~~VInt~~-~~~~~~~~~dg~~iRr~a~~~~Ip~~T 106 (115)
T cd01422 44 TGLTVNRMKSGPLGG---D-QQIGALIAEGEIDAVIFFRD-PLTAQPHEPDVKALLRLCDVYNIPLAT 106 (115)
T ss_pred hCCcEEEEecCCCCc---h-hHHHHHHHcCceeEEEEcCC-CCCCCcccccHHHHHHHHHHcCCCEEE
Confidence 577776663322222 2 34555555555555666553 223322236788999999999998774
No 429
>cd06562 GH20_HexA_HexB-like Beta-N-acetylhexosaminidases catalyze the removal of beta-1,4-linked N-acetyl-D-hexosamine residues from the non-reducing ends of N-acetyl-beta-D-hexosaminides including N-acetylglucosides and N-acetylgalactosides. The hexA and hexB genes encode the alpha- and beta-subunits of the two major beta-N-acetylhexosaminidase isoenzymes, N-acetyl-beta-D-hexosaminidase A (HexA) and beta-N-acetylhexosaminidase B (HexB). Both the alpha and the beta catalytic subunits have a TIM-barrel fold and belong to the glycosyl hydrolase family 20 (GH20). The HexA enzyme is a heterodimer containing one alpha and one beta subunit while the HexB enzyme is a homodimer containing two beta-subunits. Hexosaminidase mutations cause an inability to properly hydrolyze certain sphingolipids which accumulate in lysosomes within the brain, resulting in the lipid storage disorders Tay-Sachs and Sandhoff. Mutations in the alpha subunit cause in a deficiency in the HexA enzyme and result in
Probab=44.84 E-value=38 Score=31.56 Aligned_cols=62 Identities=16% Similarity=0.319 Sum_probs=37.5
Q ss_pred HHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEE
Q 014936 140 SAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVI 210 (415)
Q Consensus 140 ~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li 210 (415)
.......++..+.+..+.+|.+....+.++-... ....|-.++.+++++|++.|+++|+-||
T Consensus 26 ~ma~~KlN~lh~HltDd~~~rle~~~~P~Lt~~g---------a~~~~~~YT~~di~eiv~yA~~rgI~vI 87 (348)
T cd06562 26 AMAYNKLNVLHWHITDSQSFPLESPSYPELSKKG---------AYSPSEVYTPEDVKEIVEYARLRGIRVI 87 (348)
T ss_pred HHHHhCCcEEEEeEEcCCCceEeeCCCchhhhcc---------CcCCCceECHHHHHHHHHHHHHcCCEEE
Confidence 3344566666655544444544433332221110 1124667899999999999999999888
No 430
>cd01020 TroA_b Metal binding protein TroA_b. These proteins are predicted to function as initial receptors in ABC transport of metal ions. They belong to the TroA superfamily of helical backbone metal receptor proteins that share a distinct fold and ligand binding mechanism. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind the metal ion in the cleft between these domains. In addition, these proteins sometimes have a low complexity region containing a metal-binding histidine-rich motif (repetitive HDH sequence).
Probab=44.81 E-value=2.2e+02 Score=25.19 Aligned_cols=79 Identities=15% Similarity=0.196 Sum_probs=44.8
Q ss_pred CCCEEEEcCCCCcchHHHHHhCCCeEEEeec---cCCCCCCCChhHHH---hhcCCCceEEEecCCCCccccCCCHHHHH
Q 014936 123 PGANILLPRPGFPIYELSAAFRHIEVRHFDL---LPDKGWEVDLDDIE---SLADQNTVALVIINPGNPCGNVYSYQHLQ 196 (415)
Q Consensus 123 ~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~---~~~~~~~~~~~~l~---~~~~~~~~~v~i~~p~nptG~~~~~~~l~ 196 (415)
++..+++ .|..+..+++.+|++...+.. ....+..+++.++. +.++.+...+++.+|+.+. ...+
T Consensus 152 ~~~~~v~---~H~af~Y~~~~yGl~~~~~~~~~~~~~~~~~ps~~~l~~l~~~ik~~~v~~if~e~~~~~------k~~~ 222 (264)
T cd01020 152 KGAPVAA---TEPVFDYLLDALGMKERTPKGYTATTESETEPSPADIAAFQNAIKNRQIDALIVNPQQAS------SATT 222 (264)
T ss_pred CCCeEEE---eCchHHHHHHHCCCcccCHHHHHhhhcCCCCCCHHHHHHHHHHHHhCCCCEEEeCCCCCc------HHHH
Confidence 3456666 455666778889998653210 00113345555544 4445554456777776544 3446
Q ss_pred HHHHHHhhcCcEEE
Q 014936 197 KLAETANKLKTLVI 210 (415)
Q Consensus 197 ~i~~~~~~~~~~li 210 (415)
.+..++++.|+.++
T Consensus 223 ~l~~la~~~~~~v~ 236 (264)
T cd01020 223 NITGLAKRSGVPVV 236 (264)
T ss_pred HHHHHHHHcCCCEE
Confidence 56667778877653
No 431
>smart00642 Aamy Alpha-amylase domain.
Probab=44.72 E-value=29 Score=28.40 Aligned_cols=28 Identities=25% Similarity=0.323 Sum_probs=24.9
Q ss_pred HHHHHHHHHHHhhcCcEEEEccccCCcc
Q 014936 192 YQHLQKLAETANKLKTLVIADEVYGHLV 219 (415)
Q Consensus 192 ~~~l~~i~~~~~~~~~~li~De~~~~~~ 219 (415)
.++++++++.|+++|+.+|.|-+..+..
T Consensus 69 ~~d~~~lv~~~h~~Gi~vilD~V~NH~~ 96 (166)
T smart00642 69 MEDFKELVDAAHARGIKVILDVVINHTS 96 (166)
T ss_pred HHHHHHHHHHHHHCCCEEEEEECCCCCC
Confidence 3999999999999999999999887633
No 432
>TIGR00290 MJ0570_dom MJ0570-related uncharacterized domain. Proteins with this uncharacterized domain include two apparent ortholog families in the Archaea, one of which is universal among the first four completed archaeal genomes, and YLR143W, a much longer protein from Saccharomyces cerevisiae. The domain comprises the full length of the archaeal proteins and the first third of the yeast protein.
Probab=44.53 E-value=2.1e+02 Score=24.76 Aligned_cols=96 Identities=18% Similarity=0.216 Sum_probs=59.2
Q ss_pred EEEeCChHHHHHHHHHHhcCCCCEEEE----cCC--C--Cc-----chHHHHHhCCCeEEEeeccCCCCCCCChhHHHhh
Q 014936 103 VFVTSGCTQAIDVAMALLSRPGANILL----PRP--G--FP-----IYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESL 169 (415)
Q Consensus 103 i~i~~g~~~al~~~~~~l~~~gd~vi~----~~p--~--y~-----~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~ 169 (415)
++..|||-.+..++..+..+ .+.+.+ +.. . |+ .....++..|+.+..++.... ..--.+.+.++
T Consensus 4 ~~l~SGGKDS~~al~~a~~~-~~v~~L~t~~~~~~~s~~~H~~~~~~~~~qA~algipl~~~~~~~~--~e~~~e~l~~~ 80 (223)
T TIGR00290 4 AALISGGKDSCLALYHALKE-HEVISLVNIMPENEESYMFHGVNAHLTDLQAESIGIPLIKLYTEGT--EEDEVEELKGI 80 (223)
T ss_pred EEEecCcHHHHHHHHHHHHh-CeeEEEEEEecCCCCcccccccCHHHHHHHHHHcCCCeEEeecCCC--ccHHHHHHHHH
Confidence 56788888888888877765 443221 111 1 11 123456778888766554221 12235666665
Q ss_pred cCC-CceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcE
Q 014936 170 ADQ-NTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTL 208 (415)
Q Consensus 170 ~~~-~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~ 208 (415)
+++ ....++ +|.+.+......+-++|.+.|+.
T Consensus 81 l~~~gv~~vv-------~GdI~s~~qr~~~e~v~~~lgl~ 113 (223)
T TIGR00290 81 LHTLDVEAVV-------FGAIYSEYQKTRIERVCRELGLK 113 (223)
T ss_pred HHHcCCCEEE-------ECCcccHHHHHHHHHHHHhcCCE
Confidence 543 222333 79999999999999999998875
No 433
>PRK11070 ssDNA exonuclease RecJ; Provisional
Probab=44.51 E-value=2.5e+02 Score=28.35 Aligned_cols=99 Identities=14% Similarity=0.138 Sum_probs=58.8
Q ss_pred EeCChHHHHHHHHHHhcCCCCEEEEc-CCCCcch------HHHHHhCCC-eE-EEeeccCCCCCCCChhHHHhhcCCCce
Q 014936 105 VTSGCTQAIDVAMALLSRPGANILLP-RPGFPIY------ELSAAFRHI-EV-RHFDLLPDKGWEVDLDDIESLADQNTV 175 (415)
Q Consensus 105 i~~g~~~al~~~~~~l~~~gd~vi~~-~p~y~~~------~~~~~~~g~-~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~ 175 (415)
...+-..+...+..++.+ +.+|++. +..-.++ ...++..|. .+ .++|.-..++|+++.+.+++.......
T Consensus 51 ~l~~m~~a~~ri~~ai~~-~e~I~I~gDyD~DGitstail~~~L~~~g~~~~~~~IP~R~~eGYGl~~~~i~~~~~~~~~ 129 (575)
T PRK11070 51 QLSGIEKAVELLYNALRE-GTRIIVVGDFDADGATSTALSVLALRSLGCSNVDYLVPNRFEDGYGLSPEVVDQAHARGAQ 129 (575)
T ss_pred HhhCHHHHHHHHHHHHHC-CCEEEEEEecCccHHHHHHHHHHHHHHcCCCceEEEeCCCCcCCCCCCHHHHHHHHhcCCC
Confidence 346677777777777654 3454443 3332222 344566777 34 456655567889999999987766667
Q ss_pred EEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEcc
Q 014936 176 ALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADE 213 (415)
Q Consensus 176 ~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De 213 (415)
+++.+.+. .. . .+.++.|+++|+-+|+=|
T Consensus 130 LiItvD~G----i~----~-~e~i~~a~~~gidvIVtD 158 (575)
T PRK11070 130 LIVTVDNG----IS----S-HAGVAHAHALGIPVLVTD 158 (575)
T ss_pred EEEEEcCC----cC----C-HHHHHHHHHCCCCEEEEC
Confidence 77766642 22 1 233455667787655533
No 434
>KOG1467 consensus Translation initiation factor 2B, delta subunit (eIF-2Bdelta/GCD2) [Translation, ribosomal structure and biogenesis]
Probab=44.11 E-value=2.9e+02 Score=26.87 Aligned_cols=133 Identities=17% Similarity=0.173 Sum_probs=79.1
Q ss_pred CCCCcHHHHHHHHHHHhhhCCC-----------CCCCCcEEEeCChHHHHHHHHHHhcCCC---CEEEEc-CCCCcc--h
Q 014936 75 PTAGLPLTRRAIAEYLSRDLPY-----------KLTPNDVFVTSGCTQAIDVAMALLSRPG---ANILLP-RPGFPI--Y 137 (415)
Q Consensus 75 ~~~g~~~lr~~ia~~~~~~~~~-----------~~~~~~i~i~~g~~~al~~~~~~l~~~g---d~vi~~-~p~y~~--~ 137 (415)
+.++-.+|.+.|-+|+...... .+...++++|=|.+..++.++....+.| ..|+++ .|.+-+ .
T Consensus 323 e~eaKe~L~~~I~~~i~eki~~A~qaI~q~a~~KI~dgdviltyg~s~vV~~ill~A~~~~k~frVvVVDSRP~~EG~~~ 402 (556)
T KOG1467|consen 323 ESEAKEELQSDIDRFIAEKIILADQAISQHAVTKIQDGDVLLTYGSSSVVNMILLEAKELGKKFRVVVVDSRPNLEGRKL 402 (556)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCEEEEecchHHHHHHHHHHHHhCcceEEEEEeCCCCcchHHH
Confidence 3455667777777777653221 2455688888888888887776654433 233444 455544 3
Q ss_pred HHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEc-cccC
Q 014936 138 ELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIAD-EVYG 216 (415)
Q Consensus 138 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D-e~~~ 216 (415)
...+...|+++.++-++. +.-.+.+-++.++=++.--.-|.+|+..--..++=.++.+|+++|+= |+|-
T Consensus 403 lr~Lv~~GinctYv~I~a----------~syim~evtkvfLGahailsNG~vysR~GTa~valvAna~nVPVlVCCE~yK 472 (556)
T KOG1467|consen 403 LRRLVDRGINCTYVLINA----------ASYIMLEVTKVFLGAHAILSNGAVYSRVGTACVALVANAFNVPVLVCCEAYK 472 (556)
T ss_pred HHHHHHcCCCeEEEEehh----------HHHHHHhcceeeechhhhhcCcchhhhcchHHHHHHhcccCCCEEEEechhh
Confidence 344567788888765421 11112223454444444233477877666677777889999988754 4444
Q ss_pred C
Q 014936 217 H 217 (415)
Q Consensus 217 ~ 217 (415)
+
T Consensus 473 F 473 (556)
T KOG1467|consen 473 F 473 (556)
T ss_pred h
Confidence 3
No 435
>PRK11889 flhF flagellar biosynthesis regulator FlhF; Provisional
Probab=43.74 E-value=3e+02 Score=26.40 Aligned_cols=97 Identities=7% Similarity=-0.079 Sum_probs=42.9
Q ss_pred HHHHHHHHHHhcCCCCEEEEcC-CCCc--ch---HHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcC---C--CceEEE
Q 014936 110 TQAIDVAMALLSRPGANILLPR-PGFP--IY---ELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLAD---Q--NTVALV 178 (415)
Q Consensus 110 ~~al~~~~~~l~~~gd~vi~~~-p~y~--~~---~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~---~--~~~~v~ 178 (415)
|..+..+...+.+.|.+|.+.+ -.|. .. ...+...|+.+... .+.+.+.+.+. . +...|+
T Consensus 255 TTTiaKLA~~L~~~GkkVglI~aDt~RiaAvEQLk~yae~lgipv~v~---------~d~~~L~~aL~~lk~~~~~DvVL 325 (436)
T PRK11889 255 TTTLAKMAWQFHGKKKTVGFITTDHSRIGTVQQLQDYVKTIGFEVIAV---------RDEAAMTRALTYFKEEARVDYIL 325 (436)
T ss_pred HHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHhhhcCCcEEec---------CCHHHHHHHHHHHHhccCCCEEE
Confidence 3334444444556665554332 2332 22 22333455554332 14455554442 1 235566
Q ss_pred ecCCC-CccccCCCHHHHHHHHHHHhhcCcEEEEccccC
Q 014936 179 IINPG-NPCGNVYSYQHLQKLAETANKLKTLVIADEVYG 216 (415)
Q Consensus 179 i~~p~-nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~ 216 (415)
+-.+. ++. .....+++.++.+....+.+++++|....
T Consensus 326 IDTaGRs~k-d~~lm~EL~~~lk~~~PdevlLVLsATtk 363 (436)
T PRK11889 326 IDTAGKNYR-ASETVEEMIETMGQVEPDYICLTLSASMK 363 (436)
T ss_pred EeCccccCc-CHHHHHHHHHHHhhcCCCeEEEEECCccC
Confidence 66552 221 11111344444444444567788886543
No 436
>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]
Probab=43.36 E-value=2.6e+02 Score=25.50 Aligned_cols=110 Identities=23% Similarity=0.193 Sum_probs=59.8
Q ss_pred cEEEeCChHHHHHHHHHHhcCC-C-C-EEEEcCCCCcchHHHHHh-CC-CeEEEeeccCCCCCCCChhHHHhhcCC-Cce
Q 014936 102 DVFVTSGCTQAIDVAMALLSRP-G-A-NILLPRPGFPIYELSAAF-RH-IEVRHFDLLPDKGWEVDLDDIESLADQ-NTV 175 (415)
Q Consensus 102 ~i~i~~g~~~al~~~~~~l~~~-g-d-~vi~~~p~y~~~~~~~~~-~g-~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~ 175 (415)
.+++|.|+--.=+..++.+.+. . + .+.++..+|.+....+.. .+ .....+..+ --|.+.+.+.+.+ ++.
T Consensus 2 ~iLVTGGaGFIGsnfvr~~~~~~~d~~v~~~DkLTYAgn~~~l~~~~~~~~~~fv~~D-----I~D~~~v~~~~~~~~~D 76 (340)
T COG1088 2 KILVTGGAGFIGSNFVRYILNKHPDDHVVNLDKLTYAGNLENLADVEDSPRYRFVQGD-----ICDRELVDRLFKEYQPD 76 (340)
T ss_pred cEEEecCcchHHHHHHHHHHhcCCCceEEEEecccccCCHHHHHhhhcCCCceEEecc-----ccCHHHHHHHHHhcCCC
Confidence 4677777544434444444432 2 3 467889999886665433 22 244444332 1356777777664 233
Q ss_pred EEE-----------ecCC-----CCccccCCCHHHHHHHHHHHhhcCc-----EEEEccccCCcccCCC
Q 014936 176 ALV-----------IINP-----GNPCGNVYSYQHLQKLAETANKLKT-----LVIADEVYGHLVFGDK 223 (415)
Q Consensus 176 ~v~-----------i~~p-----~nptG~~~~~~~l~~i~~~~~~~~~-----~li~De~~~~~~~~~~ 223 (415)
+|+ |..| .|-.|+ ..|++.+++++. .+=.||+|+.+..++.
T Consensus 77 ~VvhfAAESHVDRSI~~P~~Fi~TNv~GT-------~~LLEaar~~~~~frf~HISTDEVYG~l~~~~~ 138 (340)
T COG1088 77 AVVHFAAESHVDRSIDGPAPFIQTNVVGT-------YTLLEAARKYWGKFRFHHISTDEVYGDLGLDDD 138 (340)
T ss_pred eEEEechhccccccccChhhhhhcchHHH-------HHHHHHHHHhcccceEEEeccccccccccCCCC
Confidence 332 2223 233333 345556666652 3447999999886643
No 437
>TIGR01019 sucCoAalpha succinyl-CoA synthetase, alpha subunit. ATP citrate lyases appear to form an outgroup.
Probab=43.34 E-value=75 Score=28.69 Aligned_cols=78 Identities=15% Similarity=0.081 Sum_probs=45.2
Q ss_pred cCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEE
Q 014936 130 PRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLV 209 (415)
Q Consensus 130 ~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~l 209 (415)
--|+|.+..+.....+.++..+-+... .-++.++++.+...+.+++..... +..+-++|.++|+++|+.+
T Consensus 48 G~~~y~sv~dlp~~~~~Dlavi~vpa~----~v~~~l~e~~~~Gvk~avIis~Gf------~e~~~~~l~~~a~~~giri 117 (286)
T TIGR01019 48 GLPVFDSVKEAVEETGANASVIFVPAP----FAADAIFEAIDAGIELIVCITEGI------PVHDMLKVKRYMEESGTRL 117 (286)
T ss_pred CeeccCCHHHHhhccCCCEEEEecCHH----HHHHHHHHHHHCCCCEEEEECCCC------CHHHHHHHHHHHHHcCCEE
Confidence 334566666655432233333332211 236667777766666666654332 2234578999999999998
Q ss_pred EEccccCC
Q 014936 210 IADEVYGH 217 (415)
Q Consensus 210 i~De~~~~ 217 (415)
+==.+.+.
T Consensus 118 lGPNc~Gi 125 (286)
T TIGR01019 118 IGPNCPGI 125 (286)
T ss_pred ECCCCceE
Confidence 86666554
No 438
>PF14258 DUF4350: Domain of unknown function (DUF4350)
Probab=43.29 E-value=1e+02 Score=20.69 Aligned_cols=61 Identities=20% Similarity=0.218 Sum_probs=36.4
Q ss_pred chHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCC-HHHHHHHHHHHhhcCcEEEEc
Q 014936 136 IYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYS-YQHLQKLAETANKLKTLVIAD 212 (415)
Q Consensus 136 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~-~~~l~~i~~~~~~~~~~li~D 212 (415)
.+...++..|.++..+.. ..+.+.. ....+++.+|... ++ .+++++|.++.++=|-++|+|
T Consensus 9 a~~~~L~~~g~~v~~~~~--------~~~~l~~----~~~tll~i~~~~~----~~~~~~~~~l~~~v~~G~~lvl~a 70 (70)
T PF14258_consen 9 ALYQLLEEQGVKVERWRK--------PYEALEA----DDGTLLVIGPDLR----LSEPEEAEALLEWVEAGNTLVLAA 70 (70)
T ss_pred HHHHHHHHCCCeeEEecc--------cHHHhCC----CCCEEEEEeCCCC----CCchHHHHHHHHHHHcCCEEEEeC
Confidence 455667777888866532 1333332 3334566666522 33 488999999998656555554
No 439
>smart00839 ELFV_dehydrog Glutamate/Leucine/Phenylalanine/Valine dehydrogenase. Glutamate, leucine, phenylalanine and valine dehydrogenases are structurally and functionally related. They contain a Gly-rich region containing a conserved Lys residue, which has been implicated in the catalytic activity, in each case a reversible oxidative deamination reaction.
Probab=42.08 E-value=1.4e+02 Score=22.05 Aligned_cols=55 Identities=7% Similarity=0.080 Sum_probs=33.9
Q ss_pred HHHHHhhcCeEEEcCCCCCCCCeEEEEe---eC---ChhhHH-HHHHHHHHHHHHHHHHhhh
Q 014936 360 CFKLAKEESVIILPGTAVGLKNWLRVTF---AV---DPYSLE-ECLDRIKSFYQRHAKQLQR 414 (415)
Q Consensus 360 ~~~ll~~~gi~v~~g~~~~~~~~iRi~~---~~---~~~~l~-~~l~~l~~~~~~~~~~~~~ 414 (415)
....|.+.||.+.|.......+.+...+ .. +.+++. ...+++.+.+.+..+..++
T Consensus 40 a~~~L~~rGi~~~PD~~~NaGGvi~s~~E~~~~~~~~~e~v~~~~~~~i~~~~~~v~~~a~~ 101 (102)
T smart00839 40 ADDILEDRGVLYAPDFAANAGGVIVSALEMLQNLARTAEEVFTDLSEIMRNALEEIFETAQK 101 (102)
T ss_pred HHHHHHHCCCEEcCcceecCCCEEeehhhhhcccCCCHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 5666788899999976554433333333 11 444444 7777777777776665444
No 440
>PLN03244 alpha-amylase; Provisional
Probab=41.48 E-value=43 Score=34.64 Aligned_cols=37 Identities=19% Similarity=0.164 Sum_probs=30.7
Q ss_pred ccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccC
Q 014936 185 PCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFG 221 (415)
Q Consensus 185 ptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~ 221 (415)
|+...-+.++++++++.|++.|+-||+|-++.++.-+
T Consensus 433 pssRYGTPeDLK~LVD~aH~~GI~VILDvV~NH~~~d 469 (872)
T PLN03244 433 ASSRYGTPDDFKRLVDEAHGLGLLVFLDIVHSYAAAD 469 (872)
T ss_pred cCcccCCHHHHHHHHHHHHHCCCEEEEEecCccCCCc
Confidence 4444456799999999999999999999999886643
No 441
>TIGR02104 pulA_typeI pullulanase, type I. Pullulan is an unusual, industrially important polysaccharide in which short alpha-1,4 chains (maltotriose) are connected in alpha-1,6 linkages. Enzymes that cleave alpha-1,6 linkages in pullulan and release maltotriose are called pullulanases although pullulan itself may not be the natural substrate. This family consists of pullulanases related to the subfamilies described in TIGR02102 and TIGR02103 but having a different domain architecture with shorter sequences. Members are called type I pullulanases.
Probab=41.37 E-value=26 Score=35.49 Aligned_cols=28 Identities=25% Similarity=0.376 Sum_probs=25.4
Q ss_pred HHHHHHHHHHHhhcCcEEEEccccCCcc
Q 014936 192 YQHLQKLAETANKLKTLVIADEVYGHLV 219 (415)
Q Consensus 192 ~~~l~~i~~~~~~~~~~li~De~~~~~~ 219 (415)
.++++++++.|+++|+-||+|-++.+..
T Consensus 228 ~~efk~lV~~~H~~Gi~VilDvV~NH~~ 255 (605)
T TIGR02104 228 IRELKQMIQALHENGIRVIMDVVYNHTY 255 (605)
T ss_pred HHHHHHHHHHHHHCCCEEEEEEEcCCcc
Confidence 3899999999999999999999997754
No 442
>PRK00077 eno enolase; Provisional
Probab=41.05 E-value=80 Score=30.41 Aligned_cols=86 Identities=8% Similarity=-0.024 Sum_probs=52.7
Q ss_pred HhcCCCCEEEEcCCCCcc----hHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHH
Q 014936 119 LLSRPGANILLPRPGFPI----YELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQH 194 (415)
Q Consensus 119 ~l~~~gd~vi~~~p~y~~----~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~ 194 (415)
.+.++-+-+.+++|.... +..+.+..|-.+ .+-. ++.+..+++.+++.++.+..-++...++.-.| + .+
T Consensus 272 ~l~e~y~i~~iEdPl~~~D~~g~~~L~~~~~~~i-pI~g--dE~~~t~~~~~~~~i~~~a~d~v~ik~~~~GG-i---te 344 (425)
T PRK00077 272 ELVDKYPIVSIEDGLDENDWEGWKLLTEKLGDKV-QLVG--DDLFVTNTKRLKKGIEKGAANSILIKVNQIGT-L---TE 344 (425)
T ss_pred HHHhhCCcEEEEcCCCCccHHHHHHHHHhcCCCC-eEEc--CCCccCCHHHHHHHHHhCCCCEEEeCccccCC-H---HH
Confidence 344555678899999763 333334443121 1111 12122368899888876655566666665333 3 58
Q ss_pred HHHHHHHHhhcCcEEEE
Q 014936 195 LQKLAETANKLKTLVIA 211 (415)
Q Consensus 195 l~~i~~~~~~~~~~li~ 211 (415)
..+++++|+.+|+.+++
T Consensus 345 a~~ia~lA~~~gi~~~v 361 (425)
T PRK00077 345 TLDAIELAKRAGYTAVV 361 (425)
T ss_pred HHHHHHHHHHcCCeEEE
Confidence 89999999999986553
No 443
>cd03313 enolase Enolase: Enolases are homodimeric enzymes that catalyse the reversible dehydration of 2-phospho-D-glycerate to phosphoenolpyruvate as part of the glycolytic and gluconeogenesis pathways. The reaction is facilitated by the presence of metal ions.
Probab=40.06 E-value=75 Score=30.43 Aligned_cols=93 Identities=11% Similarity=-0.005 Sum_probs=56.7
Q ss_pred HHHHHHHHHHhcCCCCEEEEcCCCCcc----hHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCc
Q 014936 110 TQAIDVAMALLSRPGANILLPRPGFPI----YELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNP 185 (415)
Q Consensus 110 ~~al~~~~~~l~~~gd~vi~~~p~y~~----~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~np 185 (415)
.+++.... .+.++-+-+.+++|.... +..+.+..|..+. +- .++.+..+++.+++.++.+..-++...|+.-
T Consensus 264 ~eai~~~~-~l~e~~~i~~iEdPl~~~D~eg~~~L~~~~g~~ip-i~--gdE~~~~~~~~~~~~i~~~a~d~v~ik~~~i 339 (408)
T cd03313 264 EELIDYYK-ELVKKYPIVSIEDPFDEDDWEGWAKLTAKLGDKIQ-IV--GDDLFVTNPERLKKGIEKKAANALLIKVNQI 339 (408)
T ss_pred HHHHHHHH-HHHHhCCcEEEEeCCCCcCHHHHHHHHHhcCCCCe-EE--cCCcccCCHHHHHHHHHhCCCCEEEEccccc
Confidence 45555333 334445677899999753 3334444422322 11 1121234788998888766555666676654
Q ss_pred cccCCCHHHHHHHHHHHhhcCcEEE
Q 014936 186 CGNVYSYQHLQKLAETANKLKTLVI 210 (415)
Q Consensus 186 tG~~~~~~~l~~i~~~~~~~~~~li 210 (415)
.|. .+..+++++|+.+|+.++
T Consensus 340 GGi----te~~~ia~lA~~~G~~~~ 360 (408)
T cd03313 340 GTL----TETIEAIKLAKKNGYGVV 360 (408)
T ss_pred CCH----HHHHHHHHHHHHcCCeEE
Confidence 443 588999999999998876
No 444
>TIGR00511 ribulose_e2b2 ribose-1,5-bisphosphate isomerase, e2b2 family. The delineation of this family was based originally, in part, on a discussion and neighbor-joining phylogenetic study by Kyrpides and Woese of archaeal and other proteins homologous to the alpha, beta, and delta subunits of eukaryotic initiation factor 2B (eIF-2B), a five-subunit molecule that catalyzes GTP recycling for eIF-2. Recently, Sato, et al. assigned the function ribulose-1,5 bisphosphate isomerase.
Probab=39.06 E-value=3e+02 Score=25.05 Aligned_cols=103 Identities=14% Similarity=0.056 Sum_probs=50.8
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCC--EEEEc--CCCCcch--HHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCC
Q 014936 99 TPNDVFVTSGCTQAIDVAMALLSRPGA--NILLP--RPGFPIY--ELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ 172 (415)
Q Consensus 99 ~~~~i~i~~g~~~al~~~~~~l~~~gd--~vi~~--~p~y~~~--~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~ 172 (415)
...++++|.|.+..+..++....+.|. +|++. .|.+.+. ...+...|+++..++- ..+-..+..
T Consensus 114 ~~g~~ILT~~~S~tv~~~l~~a~~~~~~f~V~v~EsrP~~~G~~~a~~L~~~gI~vtlI~D----------sa~~~~m~~ 183 (301)
T TIGR00511 114 RDGDVVMTHCNSEAALSVIKTAFEQGKDIEVIATETRPRKQGHITAKELRDYGIPVTLIVD----------SAVRYFMKE 183 (301)
T ss_pred CCCCEEEEECCcHHHHHHHHHHHHcCCcEEEEEecCCCcchHHHHHHHHHHCCCCEEEEeh----------hHHHHHHHh
Confidence 345678888866666556655544443 45544 3444442 2334556877776641 122222222
Q ss_pred CceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEE
Q 014936 173 NTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIA 211 (415)
Q Consensus 173 ~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~ 211 (415)
-.+.++=.+--...|.++.+-=-..++-.|+.+++++++
T Consensus 184 vd~VivGad~v~~nG~v~nkiGT~~lA~~Ak~~~vPv~V 222 (301)
T TIGR00511 184 VDHVVVGADAITANGALINKIGTSQLALAAREARVPFMV 222 (301)
T ss_pred CCEEEECccEEecCCCEEEHHhHHHHHHHHHHhCCCEEE
Confidence 222221112211223333333335677778888888775
No 445
>PRK08265 short chain dehydrogenase; Provisional
Probab=38.30 E-value=2.7e+02 Score=24.30 Aligned_cols=55 Identities=18% Similarity=0.003 Sum_probs=29.5
Q ss_pred CCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeecc
Q 014936 100 PNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLL 154 (415)
Q Consensus 100 ~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~ 154 (415)
...+++|.+++..=..+...|.+.|..|++..-.-..........+.++..+..+
T Consensus 6 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D 60 (261)
T PRK08265 6 GKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASLGERARFIATD 60 (261)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCeeEEEEec
Confidence 3455666555444444555566788888776433322333444445555555543
No 446
>PTZ00081 enolase; Provisional
Probab=38.18 E-value=1.1e+02 Score=29.61 Aligned_cols=97 Identities=13% Similarity=0.095 Sum_probs=60.1
Q ss_pred ChHHHHHHHHHHhcCCCCEEEEcCCCCcc----hHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCC
Q 014936 108 GCTQAIDVAMALLSRPGANILLPRPGFPI----YELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPG 183 (415)
Q Consensus 108 g~~~al~~~~~~l~~~gd~vi~~~p~y~~----~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~ 183 (415)
++.+.+......+ ++-+-+.+++|.... +..+.+..|-.+..+ -++.+.-+++.+.+.++.+..-++...++
T Consensus 282 s~~eli~~~~~~l-~~y~I~~IEDPl~~~D~eg~~~Lt~~lg~~i~Iv---gDE~~~tn~~~l~~~I~~~aad~i~iKvn 357 (439)
T PTZ00081 282 TGEELVELYLDLV-KKYPIVSIEDPFDQDDWEAYAKLTAAIGQKVQIV---GDDLLVTNPTRIKKAIEKKACNALLLKVN 357 (439)
T ss_pred CHHHHHHHHHHHH-hcCCcEEEEcCCCcccHHHHHHHHHhhCCCceEE---cCCcccCCHHHHHHHHHhCCCCEEEeccc
Confidence 4445555444444 445577889999653 444445553232221 12223346889988887766556666666
Q ss_pred CccccCCCHHHHHHHHHHHhhcCcEEEEc
Q 014936 184 NPCGNVYSYQHLQKLAETANKLKTLVIAD 212 (415)
Q Consensus 184 nptG~~~~~~~l~~i~~~~~~~~~~li~D 212 (415)
. .|.+ .+..+++++|+++|+.+++=
T Consensus 358 q-iGGI---Te~l~~a~lA~~~Gi~~iis 382 (439)
T PTZ00081 358 Q-IGTV---TEAIEAAKLAQKNGWGVMVS 382 (439)
T ss_pred c-ccCH---HHHHHHHHHHHHcCCcEEEe
Confidence 5 3433 58889999999999887763
No 447
>PF04748 Polysacc_deac_2: Divergent polysaccharide deacetylase; InterPro: IPR006837 This is a family of uncharacterised proteins that includes YibQ.; PDB: 2QV5_A 2NLY_A.
Probab=37.90 E-value=1.8e+02 Score=24.95 Aligned_cols=119 Identities=17% Similarity=0.168 Sum_probs=62.4
Q ss_pred CcHHHHHHHHHHHhhhCCCCCCCCcEEEe----C---ChHHHHHHHHHHhcCCCCEEEEcCCCC--cchHHHHHhCCCeE
Q 014936 78 GLPLTRRAIAEYLSRDLPYKLTPNDVFVT----S---GCTQAIDVAMALLSRPGANILLPRPGF--PIYELSAAFRHIEV 148 (415)
Q Consensus 78 g~~~lr~~ia~~~~~~~~~~~~~~~i~i~----~---g~~~al~~~~~~l~~~gd~vi~~~p~y--~~~~~~~~~~g~~~ 148 (415)
.-.++++.+...+.+ -|..+=+. + .-..++..++..+.+.| -..+++-+- .-....++..|+..
T Consensus 72 ~~~~i~~~l~~al~~------vp~a~GvnNhmGS~~T~~~~~m~~vl~~l~~~g-l~FvDS~T~~~s~a~~~A~~~gvp~ 144 (213)
T PF04748_consen 72 SEEEIRKRLEAALAR------VPGAVGVNNHMGSRFTSDREAMRWVLEVLKERG-LFFVDSRTTPRSVAPQVAKELGVPA 144 (213)
T ss_dssp -HHHHHHHHHHHHCC------STT-SEEEEEE-CCHHC-HHHHHHHHHHHHHTT--EEEE-S--TT-SHHHHHHHCT--E
T ss_pred CHHHHHHHHHHHHHH------CCCcEEEecCCCccccCCHHHHHHHHHHHHHcC-CEEEeCCCCcccHHHHHHHHcCCCE
Confidence 346777777777753 22222221 1 22556777777776665 444443333 34567788899887
Q ss_pred EEeeccCCCCCCCChhHHHhhcC-------CCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEE
Q 014936 149 RHFDLLPDKGWEVDLDDIESLAD-------QNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVI 210 (415)
Q Consensus 149 ~~~~~~~~~~~~~~~~~l~~~~~-------~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li 210 (415)
...++.-++. .+.+.+++.++ .+..+|.|.||+..| .+.+++...-.++.|+-++
T Consensus 145 ~~rdvfLD~~--~~~~~I~~ql~~~~~~A~~~G~aI~Igh~~p~T-----l~~L~~~~~~l~~~gi~lV 206 (213)
T PF04748_consen 145 ARRDVFLDND--QDEAAIRRQLDQAARIARKQGSAIAIGHPRPET-----LEALEEWLPELEAQGIELV 206 (213)
T ss_dssp EE-SEETTST---SHHHHHHHHHHHHHHHHCCSEEEEEEE-SCCH-----HHHHHHHHHHHHHCTEEE-
T ss_pred EeeceecCCC--CCHHHHHHHHHHHHHhhhhcCcEEEEEcCCHHH-----HHHHHHHHhHHhhCCEEEE
Confidence 6655543333 56666665543 366788899987654 2445555554556666554
No 448
>PRK08638 threonine dehydratase; Validated
Probab=36.82 E-value=1.9e+02 Score=26.84 Aligned_cols=52 Identities=15% Similarity=0.075 Sum_probs=36.3
Q ss_pred CcEEEeCChHHHHHHHHHHhc-CCCCEEEEcCCCCcchHHHHHhCCCeEEEee
Q 014936 101 NDVFVTSGCTQAIDVAMALLS-RPGANILLPRPGFPIYELSAAFRHIEVRHFD 152 (415)
Q Consensus 101 ~~i~i~~g~~~al~~~~~~l~-~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~ 152 (415)
..|+.+++|..++.++..+-. +-.-.|+++......-....+.+|++++.++
T Consensus 76 ~~vv~~SsGN~g~alA~~aa~~G~~~~iv~p~~~~~~k~~~~~~~GA~V~~~~ 128 (333)
T PRK08638 76 KGVVACSAGNHAQGVALSCALLGIDGKVVMPKGAPKSKVAATCGYGAEVVLHG 128 (333)
T ss_pred CeEEEeCCcHHHHHHHHHHHHcCCCEEEEeCCCCcHHHHHHHHHcCCEEEEEC
Confidence 467778888888877776643 2224666666665566678899999998764
No 449
>COG2984 ABC-type uncharacterized transport system, periplasmic component [General function prediction only]
Probab=35.71 E-value=3.5e+02 Score=24.81 Aligned_cols=144 Identities=21% Similarity=0.148 Sum_probs=78.3
Q ss_pred cHHHHHHHHHHHhcCC----CCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEE
Q 014936 54 THVATEAVAEALLSEK----FNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILL 129 (415)
Q Consensus 54 ~~~~~~a~~~~~~~~~----~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~ 129 (415)
-.+.++.+++.+.... -..|....|.....+.|++.+.. +..+++++-++..| ..+..+..+ --|++
T Consensus 44 Ld~~~~G~~~aLk~~G~~n~~i~~~na~~~~~~a~~iarql~~------~~~dviv~i~tp~A-q~~~s~~~~--iPVV~ 114 (322)
T COG2984 44 LDAAREGVKEALKDAGYKNVKIDYQNAQGDLGTAAQIARQLVG------DKPDVIVAIATPAA-QALVSATKT--IPVVF 114 (322)
T ss_pred HHHHHHHHHHHHHhcCccCeEEEeecCCCChHHHHHHHHHhhc------CCCcEEEecCCHHH-HHHHHhcCC--CCEEE
Confidence 3455555666665321 12556678888999999999842 44477777776666 334444432 22444
Q ss_pred cCCCCc---chHHHHHhCCCeEEEeeccCCCCCCCChhHHH---hhcCCCceEE-EecCCCCccccCCCHHHHHHHHHHH
Q 014936 130 PRPGFP---IYELSAAFRHIEVRHFDLLPDKGWEVDLDDIE---SLADQNTVAL-VIINPGNPCGNVYSYQHLQKLAETA 202 (415)
Q Consensus 130 ~~p~y~---~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~---~~~~~~~~~v-~i~~p~nptG~~~~~~~l~~i~~~~ 202 (415)
..-+.+ ........-|.++..+. + ..++++-. +.+-++.+-+ ++.+|+-+ .|...++++.+.+
T Consensus 115 aavtd~v~a~Lv~~~~~pg~NvTGvs-----D-~~~v~q~i~lik~~~Pnak~Igv~Y~p~E~----ns~~l~eelk~~A 184 (322)
T COG2984 115 AAVTDPVGAKLVKSLEQPGGNVTGVS-----D-LLPVAQQIELIKALLPNAKSIGVLYNPGEA----NSVSLVEELKKEA 184 (322)
T ss_pred EccCchhhccCCccccCCCCceeecC-----C-cchHHHHHHHHHHhCCCCeeEEEEeCCCCc----ccHHHHHHHHHHH
Confidence 332221 12222222344444432 1 12333322 3334555444 78887422 1236788999999
Q ss_pred hhcCcEEEEccccC
Q 014936 203 NKLKTLVIADEVYG 216 (415)
Q Consensus 203 ~~~~~~li~De~~~ 216 (415)
++.|+-+++=.+..
T Consensus 185 ~~~Gl~vve~~v~~ 198 (322)
T COG2984 185 RKAGLEVVEAAVTS 198 (322)
T ss_pred HHCCCEEEEEecCc
Confidence 99999888765533
No 450
>PF13872 AAA_34: P-loop containing NTP hydrolase pore-1
Probab=35.67 E-value=31 Score=31.21 Aligned_cols=28 Identities=14% Similarity=0.256 Sum_probs=23.2
Q ss_pred HHHHHHHHHH-hhcCcEEEEccccCCccc
Q 014936 193 QHLQKLAETA-NKLKTLVIADEVYGHLVF 220 (415)
Q Consensus 193 ~~l~~i~~~~-~~~~~~li~De~~~~~~~ 220 (415)
..+++|++|| ..++..||.||+|..-..
T Consensus 159 sRl~ql~~W~g~dfdgvivfDEcH~akn~ 187 (303)
T PF13872_consen 159 SRLDQLVDWCGEDFDGVIVFDECHKAKNL 187 (303)
T ss_pred chHHHHHHHHhcCCCceEEeccchhcCCC
Confidence 6799999999 457889999999976443
No 451
>PRK08535 translation initiation factor IF-2B subunit delta; Provisional
Probab=35.52 E-value=3.5e+02 Score=24.76 Aligned_cols=102 Identities=15% Similarity=0.104 Sum_probs=52.7
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCC--CEEEEc--CCCCcc--hHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCC
Q 014936 99 TPNDVFVTSGCTQAIDVAMALLSRPG--ANILLP--RPGFPI--YELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ 172 (415)
Q Consensus 99 ~~~~i~i~~g~~~al~~~~~~l~~~g--d~vi~~--~p~y~~--~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~ 172 (415)
...++++|.|.+.....++....+.| -+|++. .|...+ ....+...|+++..++- ..+-..+..
T Consensus 119 ~~g~~ILT~~~S~tv~~~l~~A~~~~k~~~V~v~EsrP~~~G~~~a~~L~~~GI~vtlI~D----------sav~~~m~~ 188 (310)
T PRK08535 119 RDGDVIMTHCNSSAALSVIKTAHEQGKDIEVIATETRPRNQGHITAKELAEYGIPVTLIVD----------SAVRYFMKD 188 (310)
T ss_pred CCCCEEEEeCCcHHHHHHHHHHHHCCCeEEEEEecCCchhhHHHHHHHHHHCCCCEEEEeh----------hHHHHHHHh
Confidence 45568888887766666666654444 345554 344333 12334566888777642 112222222
Q ss_pred CceEEEe-cCCCCccccCCCHHHHHHHHHHHhhcCcEEEE
Q 014936 173 NTVALVI-INPGNPCGNVYSYQHLQKLAETANKLKTLVIA 211 (415)
Q Consensus 173 ~~~~v~i-~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~ 211 (415)
...+++ .+.-...|.++.+-=-..++-.|+.+++++++
T Consensus 189 -vd~VivGAd~v~~nG~v~nkiGT~~~A~~Ak~~~vPv~V 227 (310)
T PRK08535 189 -VDKVVVGADAITANGAVINKIGTSQIALAAHEARVPFMV 227 (310)
T ss_pred -CCEEEECccEEecCCCEEeHHhHHHHHHHHHHhCCCEEE
Confidence 222322 22222334443333345677778888888775
No 452
>PF01008 IF-2B: Initiation factor 2 subunit family; InterPro: IPR000649 Initiation factor 2 binds to Met-tRNA, GTP and the small ribosomal subunit. The eukaryotic translation initiation factor EIF-2B is a complex made up of five different subunits, alpha, beta, gamma, delta and epsilon, and catalyses the exchange of EIF-2-bound GDP for GTP. This family includes initiation factor 2B alpha, beta and delta subunits from eukaryotes; related proteins from archaebacteria and IF-2 from prokaryotes and also contains a subfamily of proteins in eukaryotes, archaeae (e.g. Pyrococcus furiosus), or eubacteria such as Bacillus subtilis and Thermotoga maritima. Many of these proteins were initially annotated as putative translation initiation factors despite the fact that there is no evidence for the requirement of an IF2 recycling factor in prokaryotic translation initiation. Recently, one of these proteins from B. subtilis has been functionally characterised as a 5-methylthioribose-1-phosphate isomerase (MTNA) []. This enzyme participates in the methionine salvage pathway catalysing the isomerisation of 5-methylthioribose-1-phosphate to 5-methylthioribulose-1-phosphate []. The methionine salvage pathway leads to the synthesis of methionine from methylthioadenosine, the end product of the spermidine and spermine anabolism in many species.; GO: 0044237 cellular metabolic process; PDB: 1VB5_A 1T5O_D 3A11_E 3VM6_C 1W2W_A 1T9K_A 3ECS_B 2YRF_A 2YVK_B 2A0U_A ....
Probab=34.90 E-value=1.9e+02 Score=25.83 Aligned_cols=119 Identities=17% Similarity=0.131 Sum_probs=56.5
Q ss_pred HHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCC--EEEEc--CCCCcc--hHHHHHhCCCeEEEeec
Q 014936 80 PLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGA--NILLP--RPGFPI--YELSAAFRHIEVRHFDL 153 (415)
Q Consensus 80 ~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd--~vi~~--~p~y~~--~~~~~~~~g~~~~~~~~ 153 (415)
...++.|+++..+ -+....+++|.|-+..+..++....+.|. +|++. .|...+ ....+...|+++..++-
T Consensus 91 ~~~~~~I~~~~~~----~I~~~~~ILT~~~S~~v~~~l~~a~~~~~~~~V~v~es~P~~eG~~~a~~L~~~gi~v~~i~d 166 (282)
T PF01008_consen 91 EQAREKIADHASE----LINDGDTILTHGYSSTVERFLLSAKKKGKKFRVIVLESRPYNEGRLMAKELAEAGIPVTLIPD 166 (282)
T ss_dssp HHHHHHHHHHHHC----CC-TTEEEEEES--SHHHHHHHHHHHTTEEEEEEEE--TTTTHHHTHHHHHHHTT-EEEEE-G
T ss_pred HHHHHHHHHHHHH----hccCCeEEEEeCCchHHHHHHHHHHHcCCeEEEEEccCCcchhhhhHHHHhhhcceeEEEEec
Confidence 4455555555543 24567888888888887777776655452 44444 344433 23344567888877642
Q ss_pred cCCCCCCCChhHHHhhcCC-CceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEc
Q 014936 154 LPDKGWEVDLDDIESLADQ-NTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIAD 212 (415)
Q Consensus 154 ~~~~~~~~~~~~l~~~~~~-~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D 212 (415)
..+-..+.. -.+.++=...--+.|.++..-=-..++-.|+++++++++=
T Consensus 167 ----------~~~~~~m~~~vd~VliGad~v~~nG~v~nk~Gt~~~a~~Ak~~~vPv~v~ 216 (282)
T PF01008_consen 167 ----------SAVGYVMPRDVDKVLIGADAVLANGGVVNKVGTLQLALAAKEFNVPVYVL 216 (282)
T ss_dssp ----------GGHHHHHHCTESEEEEE-SEEETTS-EEEETTHHHHHHHHHHTT-EEEEE
T ss_pred ----------hHHHHHHHHhCCeeEEeeeEEecCCCEeehhhHHHHHHHHHhhCCCEEEE
Confidence 222223322 2222221121112222222222245666778899887754
No 453
>COG0352 ThiE Thiamine monophosphate synthase [Coenzyme metabolism]
Probab=34.59 E-value=1.5e+02 Score=25.35 Aligned_cols=52 Identities=13% Similarity=0.099 Sum_probs=36.1
Q ss_pred hhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccC
Q 014936 163 LDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYG 216 (415)
Q Consensus 163 ~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~ 216 (415)
++.++++++....++-+=.-+..+-.. .+..+++.++|++|++.+|+++-..
T Consensus 24 ~~~ve~al~~Gv~~vQlR~K~~~~~~~--~~~a~~~~~lc~~~~v~liINd~~d 75 (211)
T COG0352 24 LEWVEAALKGGVTAVQLREKDLSDEEY--LALAEKLRALCQKYGVPLIINDRVD 75 (211)
T ss_pred HHHHHHHHhCCCeEEEEecCCCChHHH--HHHHHHHHHHHHHhCCeEEecCcHH
Confidence 677888887665655554444333222 4667899999999999999876543
No 454
>PTZ00187 succinyl-CoA synthetase alpha subunit; Provisional
Probab=34.58 E-value=1.3e+02 Score=27.64 Aligned_cols=78 Identities=17% Similarity=0.158 Sum_probs=49.0
Q ss_pred cCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHH-hhcCcE
Q 014936 130 PRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETA-NKLKTL 208 (415)
Q Consensus 130 ~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~-~~~~~~ 208 (415)
--|+|....+.....+++...+-+.+. .-++.++++++...+.+++..-.-|. .+..++.+++ +++|+.
T Consensus 73 Gvpvy~sv~ea~~~~~~D~avI~VPa~----~v~dai~Ea~~aGI~~~ViiteGfpe------~d~~~l~~~~~~~~g~r 142 (317)
T PTZ00187 73 GLPVFATVKEAKKATGADASVIYVPPP----HAASAIIEAIEAEIPLVVCITEGIPQ------HDMVKVKHALLSQNKTR 142 (317)
T ss_pred CccccCCHHHHhcccCCCEEEEecCHH----HHHHHHHHHHHcCCCEEEEECCCCch------hhHHHHHHHHhhcCCCE
Confidence 679999988888776666555544332 34778888887777776665543322 3344454554 457888
Q ss_pred EEEccccCC
Q 014936 209 VIADEVYGH 217 (415)
Q Consensus 209 li~De~~~~ 217 (415)
+|==.+.+.
T Consensus 143 liGPNc~Gi 151 (317)
T PTZ00187 143 LIGPNCPGI 151 (317)
T ss_pred EECCCCceE
Confidence 775555543
No 455
>TIGR02402 trehalose_TreZ malto-oligosyltrehalose trehalohydrolase. Members of this family are the trehalose biosynthetic enzyme malto-oligosyltrehalose trehalohydrolase, formally known as 4-alpha-D-{(1-4)-alpha-D-glucano}trehalose trehalohydrolase (EC 3.2.1.141). It is the TreZ protein of the TreYZ pathway for trehalose biosynthesis, and alternative to the OtsAB system.
Probab=34.31 E-value=67 Score=32.11 Aligned_cols=29 Identities=34% Similarity=0.416 Sum_probs=26.3
Q ss_pred CHHHHHHHHHHHhhcCcEEEEccccCCcc
Q 014936 191 SYQHLQKLAETANKLKTLVIADEVYGHLV 219 (415)
Q Consensus 191 ~~~~l~~i~~~~~~~~~~li~De~~~~~~ 219 (415)
+.++++++++.|+++|+-||+|-++.+..
T Consensus 158 ~~~e~k~lV~~aH~~Gi~VilD~V~NH~~ 186 (542)
T TIGR02402 158 GPDDLKALVDAAHGLGLGVILDVVYNHFG 186 (542)
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEccCCCC
Confidence 45999999999999999999999998754
No 456
>PRK05234 mgsA methylglyoxal synthase; Validated
Probab=34.05 E-value=2.4e+02 Score=22.37 Aligned_cols=69 Identities=14% Similarity=0.105 Sum_probs=38.3
Q ss_pred HHHHhC-CCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCC--CCccccCCCHHHHHHHHHHHhhcCcEEEEccc
Q 014936 139 LSAAFR-HIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINP--GNPCGNVYSYQHLQKLAETANKLKTLVIADEV 214 (415)
Q Consensus 139 ~~~~~~-g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p--~nptG~~~~~~~l~~i~~~~~~~~~~li~De~ 214 (415)
..++.. |+++..+-..+.++ + ..+...+......++++.| ..+-+ ...+...|.+.|.++|++++..-.
T Consensus 43 ~~L~~~~Gi~v~~vi~~~~gg---~-~~i~~~I~~g~i~lVInt~dp~~~~~---~~~D~~~IRR~Av~~~IP~~T~l~ 114 (142)
T PRK05234 43 GLIQEATGLDVTRLLSGPLGG---D-QQIGALIAEGKIDMLIFFRDPLTAQP---HDPDVKALLRLADVWNIPVATNRA 114 (142)
T ss_pred HHHHhccCCeeEEEEcCCCCC---c-hhHHHHHHcCceeEEEEecCCCCCCc---ccchHHHHHHHHHHcCCCEEcCHH
Confidence 334444 66665552111111 2 3344455555555555554 43332 235778999999999999886543
No 457
>COG1580 FliL Flagellar basal body-associated protein [Cell motility and secretion]
Probab=33.99 E-value=55 Score=26.55 Aligned_cols=54 Identities=15% Similarity=0.115 Sum_probs=36.2
Q ss_pred cHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeC
Q 014936 54 THVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTS 107 (415)
Q Consensus 54 ~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~ 107 (415)
.|.+++++...+.+.+...-.++.|...|+.+|.+.++..+..+....+|++|.
T Consensus 102 ~p~vrd~li~lfsskt~~eL~t~~Gke~Lk~ei~~~in~~L~~g~~V~dV~fT~ 155 (159)
T COG1580 102 KPEVRDALLMLFSSKTAAELSTPEGKEKLKAEIKDRINTILKEGQVVKDVLFTN 155 (159)
T ss_pred hHHHHHHHHHHHHhCCHHHhcCchhHHHHHHHHHHHHHHHHhcCCeeEEEeeeh
Confidence 356666666666654443445568999999999999987655443556777664
No 458
>TIGR00649 MG423 conserved hypothetical protein. Contains an ATP-binding domain at the N-terminal end of the protein. Possibly part of a superfamily of beta-lactmases
Probab=33.08 E-value=3.4e+02 Score=26.02 Aligned_cols=94 Identities=14% Similarity=0.164 Sum_probs=49.2
Q ss_pred CcEEEeCChHHH-HHHHHHHhc--------CCCCEEEEcCCCCcchH--------H-HHHhCCCeEEE-eeccCCCCCCC
Q 014936 101 NDVFVTSGCTQA-IDVAMALLS--------RPGANILLPRPGFPIYE--------L-SAAFRHIEVRH-FDLLPDKGWEV 161 (415)
Q Consensus 101 ~~i~i~~g~~~a-l~~~~~~l~--------~~gd~vi~~~p~y~~~~--------~-~~~~~g~~~~~-~~~~~~~~~~~ 161 (415)
+.|++++|++.. +..+.+... ++||.|++..+..+++. + .....|+++.. +.+ ... -
T Consensus 287 ~~vii~tg~~g~~~~~l~~~~~~~~~~i~l~~~d~vi~s~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~h~-SgH---a 362 (422)
T TIGR00649 287 NYLIITTGSQGEPYAALTRIANNEHEQIRIRKGDTVVFSAPPIPGNENIAVSILLDIRLNEVGARVIKRIHV-SGH---A 362 (422)
T ss_pred cEEEEEeCCCCcHHHHHHHHhCCCCCcEEeCCCCEEEEECCCCCcHHHHHHHHHHHHHHHhcCCEEEeceEe-cCC---C
Confidence 456676665433 333333332 37789998887777654 1 23346776543 211 111 2
Q ss_pred ChhHHHhhcCC-CceEEEecCCCCccccCCCHHHHHHHHHHHhhcC
Q 014936 162 DLDDIESLADQ-NTVALVIINPGNPCGNVYSYQHLQKLAETANKLK 206 (415)
Q Consensus 162 ~~~~l~~~~~~-~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~ 206 (415)
+-++|...++- +++.++-++.. . ..+.+.++++++.|
T Consensus 363 ~~~dl~~~i~~~~Pk~~ipvHge-----~---~~~~~~~~~a~~~g 400 (422)
T TIGR00649 363 SQEDHKLLLRLLKPKYIIPVHGE-----Y---RMLINHTKLAEEEG 400 (422)
T ss_pred CHHHHHHHHHHhCCCEEEecCCc-----H---HHHHHHHHHHHHcC
Confidence 44555443321 45666665532 2 45677777776655
No 459
>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]
Probab=33.05 E-value=3e+02 Score=26.44 Aligned_cols=93 Identities=15% Similarity=0.202 Sum_probs=58.2
Q ss_pred EEeCChHHHHHHHHHHhcCCC-CEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCC
Q 014936 104 FVTSGCTQAIDVAMALLSRPG-ANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINP 182 (415)
Q Consensus 104 ~i~~g~~~al~~~~~~l~~~g-d~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p 182 (415)
++.-|+.+....++..|.+.| ..|.+.+=++......+...|..+. .++++...+.+.. ++++..
T Consensus 181 vlvIGAGem~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~~~~~~------------~l~el~~~l~~~D--vVissT 246 (414)
T COG0373 181 VLVIGAGEMGELVAKHLAEKGVKKITIANRTLERAEELAKKLGAEAV------------ALEELLEALAEAD--VVISST 246 (414)
T ss_pred EEEEcccHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHhCCeee------------cHHHHHHhhhhCC--EEEEec
Confidence 333445555566788888777 7899999999888888988885543 4555555554332 344433
Q ss_pred CCccccCCCHHHHHHHHHHHhhcCcEEEEccc
Q 014936 183 GNPCGNVYSYQHLQKLAETANKLKTLVIADEV 214 (415)
Q Consensus 183 ~nptG~~~~~~~l~~i~~~~~~~~~~li~De~ 214 (415)
+.|+ .+++.+.++..... ++. .+++|-+
T Consensus 247 sa~~-~ii~~~~ve~a~~~--r~~-~livDia 274 (414)
T COG0373 247 SAPH-PIITREMVERALKI--RKR-LLIVDIA 274 (414)
T ss_pred CCCc-cccCHHHHHHHHhc--ccC-eEEEEec
Confidence 3332 34566777776653 223 7888854
No 460
>cd01424 MGS_CPS_II Methylglyoxal synthase-like domain from type II glutamine-dependent carbamoyl phosphate synthetase (CSP). CSP, a CarA and CarB heterodimer, catalyzes the production of carbamoyl phosphate which is subsequently employed in the metabolic pathways responsible for the synthesis of pyrimidine nucleotides or arginine. The MGS-like domain is the C-terminal domain of CarB and appears to play a regulatory role in CPS function by binding allosteric effector molecules, including UMP and ornithine.
Probab=32.99 E-value=2e+02 Score=21.27 Aligned_cols=89 Identities=13% Similarity=0.088 Sum_probs=53.3
Q ss_pred HHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCC
Q 014936 111 QAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVY 190 (415)
Q Consensus 111 ~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~ 190 (415)
+.+..++..+.+.|-++..... ....++..|+.+..+....+ .-..+.+.+.++...+++..|....
T Consensus 13 ~~~~~~~~~l~~~G~~l~aT~g----T~~~l~~~gi~~~~v~~~~~-----~~~~i~~~i~~~~id~vIn~~~~~~---- 79 (110)
T cd01424 13 PEAVEIAKRLAELGFKLVATEG----TAKYLQEAGIPVEVVNKVSE-----GRPNIVDLIKNGEIQLVINTPSGKR---- 79 (110)
T ss_pred hHHHHHHHHHHHCCCEEEEchH----HHHHHHHcCCeEEEEeecCC-----CchhHHHHHHcCCeEEEEECCCCCc----
Confidence 3444555566666777765543 34456667888766654321 2244555555565566666664211
Q ss_pred CHHHHHHHHHHHhhcCcEEEEc
Q 014936 191 SYQHLQKLAETANKLKTLVIAD 212 (415)
Q Consensus 191 ~~~~l~~i~~~~~~~~~~li~D 212 (415)
...+-..|.+.|-++|++++..
T Consensus 80 ~~~~~~~iRR~Av~~~ipl~T~ 101 (110)
T cd01424 80 AIRDGFSIRRAALEYKVPYFTT 101 (110)
T ss_pred cCccHHHHHHHHHHhCCCEEec
Confidence 1244568888999999999854
No 461
>TIGR00289 conserved hypothetical protein TIGR00289. Homologous proteins related to MJ0570 of Methanococcus jannaschii include both the apparent orthologs found by this model above the trusted cutoff, the much longer protein YLR143W from Saccharomyces cerevisiae, and second homologous proteins from Archaeoglobus fulgidus and Pyrococcus horikoshii that appear to represent a second orthologous group.
Probab=32.85 E-value=3.3e+02 Score=23.58 Aligned_cols=96 Identities=17% Similarity=0.116 Sum_probs=57.7
Q ss_pred EEEeCChHHHHHHHHHHhcCCCCEEE--EcCC------CCc-----chHHHHHhCCCeEEEeeccCCCCCCCChhHHHhh
Q 014936 103 VFVTSGCTQAIDVAMALLSRPGANIL--LPRP------GFP-----IYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESL 169 (415)
Q Consensus 103 i~i~~g~~~al~~~~~~l~~~gd~vi--~~~p------~y~-----~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~ 169 (415)
++..|||-.+..++..+..+ .+.+. +..| +++ .....++..|+....+.... .+.-..+++.+.
T Consensus 4 ~vl~SGGKDS~lAl~~~~~~-~~V~~L~~~~~~~~~s~~~h~~~~~~~~~qA~algiPl~~~~~~~--~~e~~~~~l~~~ 80 (222)
T TIGR00289 4 AVLYSGGKDSILALYKALEE-HEVISLVGVFSENEESYMFHSPNLHLTDLVAEAVGIPLIKLYTSG--EEEKEVEDLAGQ 80 (222)
T ss_pred EEEecCcHHHHHHHHHHHHc-CeeEEEEEEcCCCCCccccccCCHHHHHHHHHHcCCCeEEEEcCC--chhHHHHHHHHH
Confidence 45778887777777766654 44322 1111 122 23345678888876665422 111234555554
Q ss_pred cCC-CceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcE
Q 014936 170 ADQ-NTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTL 208 (415)
Q Consensus 170 ~~~-~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~ 208 (415)
++. ....++ +|.+.+..+...+-++|.+.|+.
T Consensus 81 l~~~gv~~vv-------~GdI~s~~qr~~~e~vc~~~gl~ 113 (222)
T TIGR00289 81 LGELDVEALC-------IGAIESNYQKSRIDKVCRELGLK 113 (222)
T ss_pred HHHcCCCEEE-------ECccccHHHHHHHHHHHHHcCCE
Confidence 433 223333 79999999999999999998875
No 462
>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]
Probab=32.82 E-value=3.6e+02 Score=24.07 Aligned_cols=97 Identities=16% Similarity=0.217 Sum_probs=50.3
Q ss_pred cEEEeCChHHHHHHHH-HHhcCCCCEEEEcCCCCcchHHH----HHhCCCeEEEeeccCCCCCCCChhHHHhhcCCC--c
Q 014936 102 DVFVTSGCTQAIDVAM-ALLSRPGANILLPRPGFPIYELS----AAFRHIEVRHFDLLPDKGWEVDLDDIESLADQN--T 174 (415)
Q Consensus 102 ~i~i~~g~~~al~~~~-~~l~~~gd~vi~~~p~y~~~~~~----~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~ 174 (415)
..++.+|+|++|-..+ ..|.+.|..+++..=.=...... -...|.++..++.|-.+. -+++.+...+..+ .
T Consensus 7 ~~~lITGASsGIG~~~A~~lA~~g~~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~--~~~~~l~~~l~~~~~~ 84 (265)
T COG0300 7 KTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKTGVEVEVIPADLSDP--EALERLEDELKERGGP 84 (265)
T ss_pred cEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCCh--hHHHHHHHHHHhcCCc
Confidence 3445556666665444 44667887776654343333333 334567777777654322 2455555555443 4
Q ss_pred eEEEecCCC-Cccc--cCCCHHHHHHHHH
Q 014936 175 VALVIINPG-NPCG--NVYSYQHLQKLAE 200 (415)
Q Consensus 175 ~~v~i~~p~-nptG--~~~~~~~l~~i~~ 200 (415)
.-++++|.. .-.| .-.+.++..++.+
T Consensus 85 IdvLVNNAG~g~~g~f~~~~~~~~~~mi~ 113 (265)
T COG0300 85 IDVLVNNAGFGTFGPFLELSLDEEEEMIQ 113 (265)
T ss_pred ccEEEECCCcCCccchhhCChHHHHHHHH
Confidence 456666663 2233 2234455555544
No 463
>KOG4589 consensus Cell division protein FtsJ [Cell cycle control, cell division, chromosome partitioning]
Probab=32.54 E-value=3e+02 Score=23.15 Aligned_cols=37 Identities=16% Similarity=0.116 Sum_probs=23.1
Q ss_pred HHhhcCCCceEEEecCC-CCccccCCCHHHHHHHHHHHhh
Q 014936 166 IESLADQNTVALVIINP-GNPCGNVYSYQHLQKLAETANK 204 (415)
Q Consensus 166 l~~~~~~~~~~v~i~~p-~nptG~~~~~~~l~~i~~~~~~ 204 (415)
+.+++..+..-++++.- .|+||..+. +-..+.++|.+
T Consensus 128 i~e~lp~r~VdvVlSDMapnaTGvr~~--Dh~~~i~LC~s 165 (232)
T KOG4589|consen 128 IFEALPNRPVDVVLSDMAPNATGVRIR--DHYRSIELCDS 165 (232)
T ss_pred HHHhCCCCcccEEEeccCCCCcCcchh--hHHHHHHHHHH
Confidence 34445445566777755 799998753 34456677754
No 464
>COG0826 Collagenase and related proteases [Posttranslational modification, protein turnover, chaperones]
Probab=32.31 E-value=1.1e+02 Score=28.51 Aligned_cols=46 Identities=17% Similarity=0.171 Sum_probs=34.8
Q ss_pred ChhHHHhhcCCCceEEEecCC-CCccccC--CCHHHHHHHHHHHhhcCc
Q 014936 162 DLDDIESLADQNTVALVIINP-GNPCGNV--YSYQHLQKLAETANKLKT 207 (415)
Q Consensus 162 ~~~~l~~~~~~~~~~v~i~~p-~nptG~~--~~~~~l~~i~~~~~~~~~ 207 (415)
+++.+..+++....+|++..+ -|-.+.. ++.+++++++++|+++|.
T Consensus 15 ~l~~l~~ai~~GADaVY~G~~~~~~R~~a~nfs~~~l~e~i~~ah~~gk 63 (347)
T COG0826 15 NLEDLKAAIAAGADAVYIGEKEFGLRRRALNFSVEDLAEAVELAHSAGK 63 (347)
T ss_pred CHHHHHHHHHcCCCEEEeCCcccccccccccCCHHHHHHHHHHHHHcCC
Confidence 678888887766677887766 3444444 888999999999999887
No 465
>PF03652 UPF0081: Uncharacterised protein family (UPF0081); InterPro: IPR005227 Holliday junction resolvases (HJRs) are key enzymes of DNA recombination. The principal HJRs are now known or confidently predicted for all bacteria and archaea whose genomes have been completely sequenced, with many species encoding multiple potential HJRs. Structural and evolutionary relationships of HJRs and related nucleases suggests that the HJR function has evolved independently from at least four distinct structural folds, namely RNase H, endonuclease, endonuclease VII-colicin E and RusA (IPR008822 from INTERPRO): The endonuclease fold, whose structural prototypes are the phage exonuclease, the very short patch repair nuclease (Vsr) and type II restriction enzymes, is shown to encompass by far a greater diversity of nucleases than previously suspected. This fold unifies archaeal HJRs (IPR002732 from INTERPRO), repair nucleases such as RecB (IPR004586 from INTERPRO) and Vsr (IPR004603 from INTERPRO), restriction enzymes and a variety of predicted nucleases whose specific activities remain to be determined. The RNase H fold characterises the RuvC family (IPR002176 from INTERPRO), which is nearly ubiquitous in bacteria, and in addition the YqgF family (IPR005227 from INTERPRO). The proteins of this family, typified by Escherichia coli YqgF, are likely to function as an alternative to RuvC in most bacteria, but could be the principal HJRs in low-GC Gram-positive bacteria and Aquifex. Endonuclease VII of phage T4 (IPR004211 from INTERPRO) is shown to serve as a structural template for many nucleases, including McrA and other type II restriction enzymes. Together with colicin E7, endonuclease VII defines a distinct metal-dependent nuclease fold. Horizontal gene transfer, lineage-specific gene loss and gene family expansion, and non-orthologous gene displacement seem to have been major forces in the evolution of HJRs and related nucleases. A remarkable case of displacement is seen in the Lyme disease spirochete Borrelia burgdorferi, which does not possess any of the typical HJRs, but instead encodes, in its chromosome and each of the linear plasmids, members of the exonuclease family predicted to function as HJRs. The diversity of HJRs and related nucleases in bacteria and archaea contrasts with their near absence in eukaryotes. The few detected eukaryotic representatives of the endonuclease fold and the RNase H fold have probably been acquired from bacteria via horizontal gene transfer. The identity of the principal HJR(s) involved in recombination in eukaryotes remains uncertain; this function could be performed by topoisomerase IB or by a novel, so far undetected, class of enzymes. Likely HJRs and related nucleases were identified in the genomes of numerous bacterial and eukaryotic DNA viruses. Gene flow between viral and cellular genomes has probably played a major role in the evolution of this class of enzymes. This family represents the YqgF family of putative Holliday junction resolvases. With the exception of the spirochetes, the YqgF family is represented in all bacterial lineages, including the mycoplasmas with their highly degenerate genomes. The RuvC resolvases are conspicuously absent in the low-GC Gram-positive bacterial lineage, with the exception of Ureaplasma parvum (Ureaplasma urealyticum biotype 1) (Q9PQY7 from SWISSPROT, []). Furthermore, loss of function ruvC mutants of E. coli show a residual HJR activity that cannot be ascribed to the prophage-encoded RusA resolvase []. This suggests that the YqgF family proteins could be alternative HJRs whose function partially overlaps with that of RuvC [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006281 DNA repair, 0006310 DNA recombination, 0006974 response to DNA damage stimulus, 0005737 cytoplasm; PDB: 1NU0_A 1OVQ_A 1NMN_B 1VHX_B 1IV0_A.
Probab=32.25 E-value=1.4e+02 Score=23.48 Aligned_cols=58 Identities=26% Similarity=0.339 Sum_probs=37.9
Q ss_pred CCChhHHHhhcCC-CceEEEecCCCCccccCCC-HHHHHHHHHHHhh-c-CcEEE-EccccCC
Q 014936 160 EVDLDDIESLADQ-NTVALVIINPGNPCGNVYS-YQHLQKLAETANK-L-KTLVI-ADEVYGH 217 (415)
Q Consensus 160 ~~~~~~l~~~~~~-~~~~v~i~~p~nptG~~~~-~~~l~~i~~~~~~-~-~~~li-~De~~~~ 217 (415)
..+++.|.+.+++ +...+++..|-|.-|..-+ ....++.++...+ . ++.++ +||-++-
T Consensus 37 ~~~~~~l~~li~~~~i~~iVvGlP~~~~G~~~~~~~~v~~f~~~L~~~~~~ipV~~~DEr~TT 99 (135)
T PF03652_consen 37 EKDIEELKKLIEEYQIDGIVVGLPLNMDGSESEQARRVRKFAEELKKRFPGIPVILVDERLTT 99 (135)
T ss_dssp CCCHHHHHHHHHHCCECEEEEEEEBBCTSSC-CCHHHHHHHHHHHHHHH-TSEEEEEECSCSH
T ss_pred chHHHHHHHHHHHhCCCEEEEeCCcccCCCccHHHHHHHHHHHHHHHhcCCCcEEEECCChhH
Confidence 4678888888765 4678899999777666533 2344555554444 3 66654 8988764
No 466
>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]
Probab=31.93 E-value=3e+02 Score=24.79 Aligned_cols=97 Identities=14% Similarity=0.053 Sum_probs=49.1
Q ss_pred ChhHHHhhcCCC-ceEEEecCC-CCccccCCC--------HHHHHHHHHHHhhcCcEEEEccccCCcccCCCCccccccc
Q 014936 162 DLDDIESLADQN-TVALVIINP-GNPCGNVYS--------YQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVF 231 (415)
Q Consensus 162 ~~~~l~~~~~~~-~~~v~i~~p-~nptG~~~~--------~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~ 231 (415)
|.+.+.+.+++. +..||-+-. ++.-..--. ..--..++++|++.|+++|.= ..+++|+|....+...-
T Consensus 38 d~~~v~~~i~~~~PDvVIn~AAyt~vD~aE~~~e~A~~vNa~~~~~lA~aa~~~ga~lVhi--STDyVFDG~~~~~Y~E~ 115 (281)
T COG1091 38 DPDAVLEVIRETRPDVVINAAAYTAVDKAESEPELAFAVNATGAENLARAAAEVGARLVHI--STDYVFDGEKGGPYKET 115 (281)
T ss_pred ChHHHHHHHHhhCCCEEEECccccccccccCCHHHHHHhHHHHHHHHHHHHHHhCCeEEEe--ecceEecCCCCCCCCCC
Confidence 667777776553 454443333 222222222 122467899999999887742 22334555543333222
Q ss_pred CCCCCeEEEccCccccCC-------C---CceEEEEEeeC
Q 014936 232 GSTVPILTLGSLSKRWIV-------P---GWRLGWFVTTD 261 (415)
Q Consensus 232 ~~~~~~i~~~s~sK~~~~-------~---G~r~G~~~~~~ 261 (415)
+.. +-+.+.+-||..|= + =+|.+|+....
T Consensus 116 D~~-~P~nvYG~sKl~GE~~v~~~~~~~~I~Rtswv~g~~ 154 (281)
T COG1091 116 DTP-NPLNVYGRSKLAGEEAVRAAGPRHLILRTSWVYGEY 154 (281)
T ss_pred CCC-CChhhhhHHHHHHHHHHHHhCCCEEEEEeeeeecCC
Confidence 221 12334466665321 1 14788887754
No 467
>KOG2774 consensus NAD dependent epimerase [General function prediction only]
Probab=31.64 E-value=3.5e+02 Score=23.59 Aligned_cols=73 Identities=14% Similarity=0.121 Sum_probs=42.6
Q ss_pred hHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCC-ceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEcccc
Q 014936 137 YELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQN-TVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVY 215 (415)
Q Consensus 137 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~ 215 (415)
|.+.+..-+.+-..+. ..-+|-+...+|..+..+. ..+.+- ...+-+..|.+++.+|++.+++-..-
T Consensus 93 y~DILD~K~L~eIVVn--~RIdWL~HfSALLSAvGE~NVpLA~~----------VNI~GvHNil~vAa~~kL~iFVPSTI 160 (366)
T KOG2774|consen 93 YLDILDQKSLEEIVVN--KRIDWLVHFSALLSAVGETNVPLALQ----------VNIRGVHNILQVAAKHKLKVFVPSTI 160 (366)
T ss_pred hhhhhccccHHHhhcc--cccceeeeHHHHHHHhcccCCceeee----------ecchhhhHHHHHHHHcCeeEeecccc
Confidence 4444444444433332 2234666677777766543 222222 22244678889999999999998877
Q ss_pred CCcccC
Q 014936 216 GHLVFG 221 (415)
Q Consensus 216 ~~~~~~ 221 (415)
+.|.-+
T Consensus 161 GAFGPt 166 (366)
T KOG2774|consen 161 GAFGPT 166 (366)
T ss_pred cccCCC
Confidence 765543
No 468
>PRK03892 ribonuclease P protein component 3; Provisional
Probab=31.49 E-value=3.3e+02 Score=23.24 Aligned_cols=21 Identities=19% Similarity=0.104 Sum_probs=16.0
Q ss_pred CHHHHHHHHHHHhhcCcEEEE
Q 014936 191 SYQHLQKLAETANKLKTLVIA 211 (415)
Q Consensus 191 ~~~~l~~i~~~~~~~~~~li~ 211 (415)
-...++++..++++|++++++
T Consensus 151 ~L~~~r~~l~L~rKYd~P~VI 171 (216)
T PRK03892 151 ILRFMMKAWQLVNKYKVPRFI 171 (216)
T ss_pred HHHHHHHHHHHHHHcCCCEEE
Confidence 346788889999999877654
No 469
>COG0159 TrpA Tryptophan synthase alpha chain [Amino acid transport and metabolism]
Probab=31.05 E-value=3.9e+02 Score=23.86 Aligned_cols=90 Identities=12% Similarity=0.128 Sum_probs=45.8
Q ss_pred HHHHHHHHHhcCCC-CEEEEcCCCCc---chHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCcc
Q 014936 111 QAIDVAMALLSRPG-ANILLPRPGFP---IYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPC 186 (415)
Q Consensus 111 ~al~~~~~~l~~~g-d~vi~~~p~y~---~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~npt 186 (415)
-++...++-+.+.| |.+++++--.. .+...++.+|+..+.+-. | + -+.+.+++..+....-+++.+-+..|
T Consensus 109 ~Gie~F~~~~~~~GvdGlivpDLP~ee~~~~~~~~~~~gi~~I~lva-P-t---t~~~rl~~i~~~a~GFiY~vs~~GvT 183 (265)
T COG0159 109 YGIEKFLRRAKEAGVDGLLVPDLPPEESDELLKAAEKHGIDPIFLVA-P-T---TPDERLKKIAEAASGFIYYVSRMGVT 183 (265)
T ss_pred hhHHHHHHHHHHcCCCEEEeCCCChHHHHHHHHHHHHcCCcEEEEeC-C-C---CCHHHHHHHHHhCCCcEEEEeccccc
Confidence 34444444444444 66776654332 245556667776655432 1 1 13344554443333445566666667
Q ss_pred ccCCC-HHHHHHHHHHHhhc
Q 014936 187 GNVYS-YQHLQKLAETANKL 205 (415)
Q Consensus 187 G~~~~-~~~l~~i~~~~~~~ 205 (415)
|.-.+ ...+.++++..+++
T Consensus 184 G~~~~~~~~~~~~v~~vr~~ 203 (265)
T COG0159 184 GARNPVSADVKELVKRVRKY 203 (265)
T ss_pred CCCcccchhHHHHHHHHHHh
Confidence 76654 22356666655553
No 470
>PF00128 Alpha-amylase: Alpha amylase, catalytic domain; InterPro: IPR006047 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Enzymes containing this domain, such as alpha-amylase, belong to family 13 (GH13 from CAZY) of the glycosyl hydrolases. The maltogenic alpha-amylase is an enzyme which catalyses hydrolysis of (1-4)-alpha-D-glucosidic linkages in polysaccharides so as to remove successive alpha-maltose residues from the non-reducing ends of the chains in the conversion of starch to maltose. Other enzymes include neopullulanase, which hydrolyses pullulan to panose, and cyclomaltodextrinase, which hydrolyses cyclodextrins. This entry represents the catalytic domain found in several protein members of this family. It has a structure consisting of an 8 stranded alpha/beta barrel that contains the active site, interrupted by a ~70 amino acid calcium-binding domain protruding between beta strand 3 and alpha helix 3, and a carboxyl-terminal Greek key beta-barrel domain []. More information about this protein can be found at Protein of the Month: alpha-Amylase [].; GO: 0003824 catalytic activity, 0043169 cation binding, 0005975 carbohydrate metabolic process; PDB: 3FAX_A 3FAW_A 2DH3_B 2DH2_A 1CIU_A 1A47_A 3BMW_A 3BMV_A 2FH8_A 2FH6_A ....
Probab=30.84 E-value=38 Score=30.53 Aligned_cols=28 Identities=29% Similarity=0.337 Sum_probs=25.4
Q ss_pred HHHHHHHHHHHhhcCcEEEEccccCCcc
Q 014936 192 YQHLQKLAETANKLKTLVIADEVYGHLV 219 (415)
Q Consensus 192 ~~~l~~i~~~~~~~~~~li~De~~~~~~ 219 (415)
.++++++++.|+++|+.||+|-+.-+..
T Consensus 51 ~~d~~~Lv~~~h~~gi~VilD~V~NH~~ 78 (316)
T PF00128_consen 51 MEDFKELVDAAHKRGIKVILDVVPNHTS 78 (316)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEEETSEEE
T ss_pred hhhhhhhhhccccccceEEEeeeccccc
Confidence 3999999999999999999999987654
No 471
>cd06448 L-Ser-dehyd Serine dehydratase is a pyridoxal phosphate (PLP)-dependent enzyme which catalyzes the conversion of L- , D-serine, or L-threonine to pyruvate/ketobutyrate and ammonia.
Probab=30.75 E-value=4.1e+02 Score=24.30 Aligned_cols=53 Identities=17% Similarity=0.068 Sum_probs=33.7
Q ss_pred CCcEEEeCChHHHHHHHHHHhc-CCCCEEEEcCCCCcchHHHHHhCCCeEEEee
Q 014936 100 PNDVFVTSGCTQAIDVAMALLS-RPGANILLPRPGFPIYELSAAFRHIEVRHFD 152 (415)
Q Consensus 100 ~~~i~i~~g~~~al~~~~~~l~-~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~ 152 (415)
...|+..++|..+..++..+-. +---.|+++...-..-....+.+|+++..++
T Consensus 51 ~~~vv~aSsGN~g~alA~~a~~~G~~~~iv~p~~~~~~k~~~l~~~GA~v~~~~ 104 (316)
T cd06448 51 CVHVVCSSGGNAGLAAAYAARKLGVPCTIVVPESTKPRVVEKLRDEGATVVVHG 104 (316)
T ss_pred CCeEEEeCCcHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHcCCEEEEEC
Confidence 3467777777777766665532 2223555555444455677889999998875
No 472
>COG2266 GTP:adenosylcobinamide-phosphate guanylyltransferase [Coenzyme metabolism]
Probab=30.74 E-value=2.4e+02 Score=23.31 Aligned_cols=95 Identities=17% Similarity=0.165 Sum_probs=58.3
Q ss_pred CCcEEEeCChHHHHHHHHHHhcC-CCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEE
Q 014936 100 PNDVFVTSGCTQAIDVAMALLSR-PGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALV 178 (415)
Q Consensus 100 ~~~i~i~~g~~~al~~~~~~l~~-~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~ 178 (415)
++.-++--+|.-.+.-++.++.+ -++.++..+|..+.....++..|+++..- +..+|--|+...-+.+.+ ..++
T Consensus 17 ~EKPlleV~GkpLI~~v~~al~~~~d~i~v~isp~tp~t~~~~~~~gv~vi~t---pG~GYv~Dl~~al~~l~~--P~lv 91 (177)
T COG2266 17 PEKPLLEVCGKPLIDRVLEALRKIVDEIIVAISPHTPKTKEYLESVGVKVIET---PGEGYVEDLRFALESLGT--PILV 91 (177)
T ss_pred CcCcchhhCCccHHHHHHHHHHhhcCcEEEEeCCCCHhHHHHHHhcCceEEEc---CCCChHHHHHHHHHhcCC--ceEE
Confidence 66667777778888888888865 34667788999999999999999776653 345553344333333322 3333
Q ss_pred ecCCCCccccCCCHHHHHHHHHHHh
Q 014936 179 IINPGNPCGNVYSYQHLQKLAETAN 203 (415)
Q Consensus 179 i~~p~nptG~~~~~~~l~~i~~~~~ 203 (415)
++ ..=|. +....+..+.+-+.
T Consensus 92 vs-aDLp~---l~~~~i~~vi~~~~ 112 (177)
T COG2266 92 VS-ADLPF---LNPSIIDSVIDAAA 112 (177)
T ss_pred Ee-ccccc---CCHHHHHHHHHHHh
Confidence 22 11111 22356677776555
No 473
>TIGR02012 tigrfam_recA protein RecA. This model describes orthologs of the recA protein. RecA promotes hybridization of homolgous regions of DNA. A segment of ssDNA can be hybridized to another ssDNA region, or to a dsDNA region. ATP is hydrolyzed in the process. Part of the SOS respones, it is regulated by LexA via autocatalytic cleavage.
Probab=30.46 E-value=1.6e+02 Score=27.19 Aligned_cols=24 Identities=21% Similarity=0.181 Sum_probs=16.1
Q ss_pred HHHHHHHHHhhcCeEEEcCCCCCC
Q 014936 356 DIDFCFKLAKEESVIILPGTAVGL 379 (415)
Q Consensus 356 ~~~~~~~ll~~~gi~v~~g~~~~~ 379 (415)
-..-+.++..+.||.-.+|+.|..
T Consensus 266 ~~~~~~~~a~~~g~i~k~g~w~~~ 289 (321)
T TIGR02012 266 KLGEIIDLAVELDIIKKAGSWYSY 289 (321)
T ss_pred hhhHHHHHHHhCCcEEcccCEEEE
Confidence 333445566788999988876544
No 474
>PRK08057 cobalt-precorrin-6x reductase; Reviewed
Probab=30.39 E-value=1.7e+02 Score=25.75 Aligned_cols=91 Identities=15% Similarity=0.138 Sum_probs=51.3
Q ss_pred CcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCC-ChhHHHhhcCCCc-eEEE
Q 014936 101 NDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEV-DLDDIESLADQNT-VALV 178 (415)
Q Consensus 101 ~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~-~~~~l~~~~~~~~-~~v~ 178 (415)
..|++-.|++++-.++- .|.+.|..+++.--+-+.. ....+..+.. ..+ |.+.+++.++++. .+|+
T Consensus 3 ~~IlvlgGT~egr~la~-~L~~~g~~v~~Svat~~g~---~~~~~~~v~~--------G~l~~~~~l~~~l~~~~i~~VI 70 (248)
T PRK08057 3 PRILLLGGTSEARALAR-ALAAAGVDIVLSLAGRTGG---PADLPGPVRV--------GGFGGAEGLAAYLREEGIDLVI 70 (248)
T ss_pred ceEEEEechHHHHHHHH-HHHhCCCeEEEEEccCCCC---cccCCceEEE--------CCCCCHHHHHHHHHHCCCCEEE
Confidence 46899999999977654 4445676666554333222 2223333321 236 7888888876543 3333
Q ss_pred -ecCCCCccccCCCHHHHHHHHHHHhhcCcEEE
Q 014936 179 -IINPGNPCGNVYSYQHLQKLAETANKLKTLVI 210 (415)
Q Consensus 179 -i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li 210 (415)
.+|| .-..+ =+.+.+.|++.|+..+
T Consensus 71 DATHP---fA~~i----s~~a~~ac~~~~ipyi 96 (248)
T PRK08057 71 DATHP---YAAQI----SANAAAACRALGIPYL 96 (248)
T ss_pred ECCCc---cHHHH----HHHHHHHHHHhCCcEE
Confidence 3454 22222 2556677778777644
No 475
>TIGR01060 eno phosphopyruvate hydratase. Alternate name: enolase
Probab=29.95 E-value=1.4e+02 Score=28.76 Aligned_cols=92 Identities=11% Similarity=0.034 Sum_probs=53.6
Q ss_pred HHHHHHHHHhcCCCCEEEEcCCCCcc----hHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCcc
Q 014936 111 QAIDVAMALLSRPGANILLPRPGFPI----YELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPC 186 (415)
Q Consensus 111 ~al~~~~~~l~~~gd~vi~~~p~y~~----~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~npt 186 (415)
+++..+-. ++++-+-+.+++|.... +..+.+..|-.+ .+-. ++.+.-+++.+++.++.+..-++...++. .
T Consensus 266 eai~~~~~-lle~~~i~~iEdPl~~~D~~~~~~L~~~~~~~i-pI~g--DE~~~t~~~~~~~~i~~~a~d~v~ik~~~-i 340 (425)
T TIGR01060 266 EMIEYYKE-LVEKYPIVSIEDGLSEEDWEGWAELTKELGDKV-QIVG--DDLFVTNTEILREGIEMGVANSILIKPNQ-I 340 (425)
T ss_pred HHHHHHHH-HHhcCCcEEEEcCCCcccHHHHHHHHHhcCCCC-eEEe--CCCcccCHHHHHHHHHhCCCCEEEecccc-c
Confidence 55553332 33444567899999763 223333332121 1111 12222368888888876655566666655 4
Q ss_pred ccCCCHHHHHHHHHHHhhcCcEEE
Q 014936 187 GNVYSYQHLQKLAETANKLKTLVI 210 (415)
Q Consensus 187 G~~~~~~~l~~i~~~~~~~~~~li 210 (415)
|.+ .+..+++++|+.+|+.++
T Consensus 341 GGI---tea~~ia~lA~~~Gi~~v 361 (425)
T TIGR01060 341 GTL---TETLDAVELAKKAGYTAV 361 (425)
T ss_pred CCH---HHHHHHHHHHHHcCCcEE
Confidence 444 588999999999998644
No 476
>PF01408 GFO_IDH_MocA: Oxidoreductase family, NAD-binding Rossmann fold; InterPro: IPR000683 This group of enzymes utilise NADP or NAD, and is known as the GFO/IDH/MOCA family in UniProtKB/Swiss-Prot. GFO is a glucose--fructose oxidoreductase, which converts D-glucose and D-fructose into D-gluconolactone and D-glucitol in the sorbitol-gluconate pathway. MOCA is a rhizopine catabolism protein which may catalyse the NADH-dependent dehydrogenase reaction involved in rhizopine catabolism. Other proteins belonging to this family include Gal80, a negative regulator for the expression of lactose and galactose metabolic genes; and several hypothetical proteins from yeast, Escherichia coli and Bacillus subtilis. The oxidoreductase, N-terminal domain is almost always associated with the oxidoreductase, C-terminal domain (see IPR004104 from INTERPRO).; GO: 0016491 oxidoreductase activity; PDB: 1LC0_A 1LC3_A 1GCU_A 3IP3_E 3CEA_C 3EVN_A 3NTQ_A 3NTR_B 3NT5_A 3MZ0_A ....
Probab=29.81 E-value=1.4e+02 Score=22.31 Aligned_cols=21 Identities=19% Similarity=0.298 Sum_probs=15.7
Q ss_pred CHHHHHHHHHHHhhcCcEEEE
Q 014936 191 SYQHLQKLAETANKLKTLVIA 211 (415)
Q Consensus 191 ~~~~l~~i~~~~~~~~~~li~ 211 (415)
+.++.++|.++++++|..+.+
T Consensus 98 ~~~~~~~l~~~a~~~~~~~~V 118 (120)
T PF01408_consen 98 TLEEAEELVEAAKEKGVKVMV 118 (120)
T ss_dssp SHHHHHHHHHHHHHHTSCEEE
T ss_pred CHHHHHHHHHHHHHhCCEEEE
Confidence 557788888888888776654
No 477
>PF02571 CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: IPR003723 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt. Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents CobK and CbiJ precorrin-6x reductase (1.3.1.54 from EC). In the aerobic pathway, CobK catalyses the reduction of the macrocycle of precorrin-6X to produce precorrin-6Y; while in the anaerobic pathway CbiJ catalyses the reduction of the macrocycle of cobalt-precorrin-6X into cobalt-precorrin-6Y [, ].; GO: 0016994 precorrin-6A reductase activity, 0009236 cobalamin biosynthetic process, 0055114 oxidation-reduction process
Probab=29.43 E-value=1.6e+02 Score=25.98 Aligned_cols=91 Identities=18% Similarity=0.177 Sum_probs=47.1
Q ss_pred cEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHh--CCCeEEEeeccCCCCCCC-ChhHHHhhcCCCc-eEE
Q 014936 102 DVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAF--RHIEVRHFDLLPDKGWEV-DLDDIESLADQNT-VAL 177 (415)
Q Consensus 102 ~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~--~g~~~~~~~~~~~~~~~~-~~~~l~~~~~~~~-~~v 177 (415)
+|++..|++++-.++- .|.+.|. |+++--+-.+ ...... .+..+.. .++ +.+.+++.++++. .+|
T Consensus 2 ~ILvlgGTtE~r~la~-~L~~~g~-v~~sv~t~~g-~~~~~~~~~~~~v~~--------G~lg~~~~l~~~l~~~~i~~v 70 (249)
T PF02571_consen 2 KILVLGGTTEGRKLAE-RLAEAGY-VIVSVATSYG-GELLKPELPGLEVRV--------GRLGDEEGLAEFLRENGIDAV 70 (249)
T ss_pred EEEEEechHHHHHHHH-HHHhcCC-EEEEEEhhhh-HhhhccccCCceEEE--------CCCCCHHHHHHHHHhCCCcEE
Confidence 5889999999987555 5556666 5443322221 111111 1222211 135 7788887776543 333
Q ss_pred E-ecCCCCccccCCCHHHHHHHHHHHhhcCcEEE
Q 014936 178 V-IINPGNPCGNVYSYQHLQKLAETANKLKTLVI 210 (415)
Q Consensus 178 ~-i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li 210 (415)
+ .+|| .-..+ =+.+.+.|++.|+..+
T Consensus 71 IDATHP---fA~~i----s~na~~a~~~~~ipyl 97 (249)
T PF02571_consen 71 IDATHP---FAAEI----SQNAIEACRELGIPYL 97 (249)
T ss_pred EECCCc---hHHHH----HHHHHHHHhhcCcceE
Confidence 3 3444 22222 2556667777776644
No 478
>PRK07718 fliL flagellar basal body-associated protein FliL; Reviewed
Probab=29.39 E-value=66 Score=25.51 Aligned_cols=52 Identities=15% Similarity=0.241 Sum_probs=33.4
Q ss_pred HHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeC
Q 014936 55 HVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTS 107 (415)
Q Consensus 55 ~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~ 107 (415)
|.+++++...+.+-....-..+.|...||+.+.+.++..++-+ ..++|++|+
T Consensus 87 p~Ird~ii~~L~~~~~~~l~~~~G~~~Lr~el~~~in~~l~~g-~V~~Vyft~ 138 (142)
T PRK07718 87 FQVKNIIIEELADMNAEDFKGKKGLEALKEQLKEKINNLMQEG-KVEKVYITS 138 (142)
T ss_pred hhhHHHHHHHHHcCCHHHhcChhHHHHHHHHHHHHHHHhhccC-ceEEEEEEe
Confidence 3455555555554333334456789999999999998765422 456777764
No 479
>PF04016 DUF364: Domain of unknown function (DUF364); InterPro: IPR007161 This is a entry represents of bacterial and archaeal proteins of unknown function.; PDB: 3L5O_B 3NPG_A.
Probab=29.16 E-value=2.2e+02 Score=22.66 Aligned_cols=76 Identities=25% Similarity=0.275 Sum_probs=44.0
Q ss_pred CCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCC----CCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHH
Q 014936 122 RPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKG----WEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQK 197 (415)
Q Consensus 122 ~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~----~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~ 197 (415)
.+|++|.+.-. +.++...++..+.++..++.+++.. ..+..+.-++.+. +...+++ ||..+-..-+..
T Consensus 9 ~~~~~V~~VG~-f~P~~~~l~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~l~-~aD~vii------TGsTlvN~Ti~~ 80 (147)
T PF04016_consen 9 GPGDKVGMVGY-FQPLVEKLKERGAEVRVFDLNPDNIGEEPGDVPDEDAEEILP-WADVVII------TGSTLVNGTIDD 80 (147)
T ss_dssp TTTSEEEEES---HCCHHHHCCCCSEEEEEESSGGG--SSCT-EEGGGHHHHGG-G-SEEEE------ECHHCCTTTHHH
T ss_pred cCCCEEEEEcC-cHHHHHHHhcCCCCEEEEECCCCCCCCCCCcCCHHHHHHHHc-cCCEEEE------EeeeeecCCHHH
Confidence 46788877653 3346666667788888888776321 1123334444443 4455555 444444455899
Q ss_pred HHHHHhhc
Q 014936 198 LAETANKL 205 (415)
Q Consensus 198 i~~~~~~~ 205 (415)
|.+.|++.
T Consensus 81 iL~~~~~~ 88 (147)
T PF04016_consen 81 ILELARNA 88 (147)
T ss_dssp HHHHTTTS
T ss_pred HHHhCccC
Confidence 99999843
No 480
>PLN02591 tryptophan synthase
Probab=28.92 E-value=4.1e+02 Score=23.48 Aligned_cols=158 Identities=16% Similarity=0.167 Sum_probs=87.5
Q ss_pred ccCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCCh--
Q 014936 32 KNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGC-- 109 (415)
Q Consensus 32 ~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~-- 109 (415)
.++-+++-++.--.++..+ -|.++++-.+++.++.. . ...-+.+.+.- + ..+ --+++.+-.
T Consensus 27 ~~Gad~iElGiPfSDP~aD---GpvIq~a~~rAL~~G~~-----~---~~~~~~~~~~r-~----~~~-~p~ilm~Y~N~ 89 (250)
T PLN02591 27 ACGADVIELGVPYSDPLAD---GPVIQAAATRALEKGTT-----L---DSVISMLKEVA-P----QLS-CPIVLFTYYNP 89 (250)
T ss_pred HCCCCEEEECCCCCCCccc---CHHHHHHHHHHHHcCCC-----H---HHHHHHHHHHh-c----CCC-CCEEEEecccH
Confidence 3477888887775443222 48888888888875432 1 23333333322 1 011 123333332
Q ss_pred --HHHHHHHHHHhcCCC-CEEEEcCCCCc---chHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCC
Q 014936 110 --TQAIDVAMALLSRPG-ANILLPRPGFP---IYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPG 183 (415)
Q Consensus 110 --~~al~~~~~~l~~~g-d~vi~~~p~y~---~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~ 183 (415)
.-++...+..+.+.| |.+++++--+. .+...++.+|+..+.+-. |. .+.+.+++..+.....++++.-.
T Consensus 90 i~~~G~~~F~~~~~~aGv~GviipDLP~ee~~~~~~~~~~~gl~~I~lv~-Pt----t~~~ri~~ia~~~~gFIY~Vs~~ 164 (250)
T PLN02591 90 ILKRGIDKFMATIKEAGVHGLVVPDLPLEETEALRAEAAKNGIELVLLTT-PT----TPTERMKAIAEASEGFVYLVSST 164 (250)
T ss_pred HHHhHHHHHHHHHHHcCCCEEEeCCCCHHHHHHHHHHHHHcCCeEEEEeC-CC----CCHHHHHHHHHhCCCcEEEeeCC
Confidence 235566666666666 78998887664 355667788888665432 11 23455555544444556665556
Q ss_pred CccccCCC-HHHHHHHHHHHhhc-CcEEEE
Q 014936 184 NPCGNVYS-YQHLQKLAETANKL-KTLVIA 211 (415)
Q Consensus 184 nptG~~~~-~~~l~~i~~~~~~~-~~~li~ 211 (415)
..||..-. .+.+.++++.++++ ++++++
T Consensus 165 GvTG~~~~~~~~~~~~i~~vk~~~~~Pv~v 194 (250)
T PLN02591 165 GVTGARASVSGRVESLLQELKEVTDKPVAV 194 (250)
T ss_pred CCcCCCcCCchhHHHHHHHHHhcCCCceEE
Confidence 67776422 36677766666653 555554
No 481
>COG2089 SpsE Sialic acid synthase [Cell envelope biogenesis, outer membrane]
Probab=28.67 E-value=4.2e+02 Score=24.45 Aligned_cols=75 Identities=9% Similarity=-0.040 Sum_probs=47.4
Q ss_pred CCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHH
Q 014936 123 PGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETA 202 (415)
Q Consensus 123 ~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~ 202 (415)
.-+-++.++|+-....+.+...+.....+..- ...++.-++...+.+.. ++++ ||+. +.+++++.+++|
T Consensus 101 ~~Gi~~~SSPfd~~svd~l~~~~~~ayKIaS~----E~~~~plik~iA~~~kP-iIlS-----TGma-~~~ei~~av~~~ 169 (347)
T COG2089 101 KRGIIFFSSPFDLTAVDLLESLNPPAYKIASG----EINDLPLIKYIAKKGKP-IILS-----TGMA-TIEEIEEAVAIL 169 (347)
T ss_pred HcCeEEEecCCCHHHHHHHHhcCCCeEEecCc----cccChHHHHHHHhcCCC-EEEE-----cccc-cHHHHHHHHHHH
Confidence 33467777787777788888888777766531 12355555555444433 4443 4443 347888888888
Q ss_pred hhcCcE
Q 014936 203 NKLKTL 208 (415)
Q Consensus 203 ~~~~~~ 208 (415)
+++|..
T Consensus 170 r~~g~~ 175 (347)
T COG2089 170 RENGNP 175 (347)
T ss_pred HhcCCC
Confidence 887755
No 482
>CHL00200 trpA tryptophan synthase alpha subunit; Provisional
Probab=28.63 E-value=4.2e+02 Score=23.57 Aligned_cols=95 Identities=18% Similarity=0.261 Sum_probs=49.2
Q ss_pred HHHHHHHHhcCCC-CEEEEcCCCCcc---hHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccc
Q 014936 112 AIDVAMALLSRPG-ANILLPRPGFPI---YELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCG 187 (415)
Q Consensus 112 al~~~~~~l~~~g-d~vi~~~p~y~~---~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG 187 (415)
+++-.+..+.+.| |.|++++.-+.. +...++..|+....+-. |. -+.+.+++..+.....|++++-...||
T Consensus 107 G~e~F~~~~~~aGvdgviipDLP~ee~~~~~~~~~~~gi~~I~lv~-Pt----T~~eri~~i~~~a~gFIY~vS~~GvTG 181 (263)
T CHL00200 107 GINKFIKKISQAGVKGLIIPDLPYEESDYLISVCNLYNIELILLIA-PT----SSKSRIQKIARAAPGCIYLVSTTGVTG 181 (263)
T ss_pred CHHHHHHHHHHcCCeEEEecCCCHHHHHHHHHHHHHcCCCEEEEEC-CC----CCHHHHHHHHHhCCCcEEEEcCCCCCC
Confidence 4444555555555 677777655542 34556677776655432 11 134555554443333455545455677
Q ss_pred cCCC-HHHHHHHHHHHhhc-CcEEEE
Q 014936 188 NVYS-YQHLQKLAETANKL-KTLVIA 211 (415)
Q Consensus 188 ~~~~-~~~l~~i~~~~~~~-~~~li~ 211 (415)
.--. .+.+.++++..+++ +.++.+
T Consensus 182 ~~~~~~~~~~~~i~~ir~~t~~Pi~v 207 (263)
T CHL00200 182 LKTELDKKLKKLIETIKKMTNKPIIL 207 (263)
T ss_pred CCccccHHHHHHHHHHHHhcCCCEEE
Confidence 6311 24466666666543 444544
No 483
>PRK08335 translation initiation factor IF-2B subunit alpha; Validated
Probab=28.45 E-value=4.4e+02 Score=23.69 Aligned_cols=110 Identities=22% Similarity=0.213 Sum_probs=55.7
Q ss_pred HHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCC--EEEEcC--CCCcch--HHHHHhCCCeEEEeecc
Q 014936 81 LTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGA--NILLPR--PGFPIY--ELSAAFRHIEVRHFDLL 154 (415)
Q Consensus 81 ~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd--~vi~~~--p~y~~~--~~~~~~~g~~~~~~~~~ 154 (415)
+..+.|+++-... +...++++|.+.+.....+++...+.|. +|++.+ |.+.+. ...+...|+++..+.-
T Consensus 94 ~~~~~I~~~a~~~----I~~g~~ILTh~~S~tv~~~l~~A~~~gk~~~V~v~EsrP~~qG~~la~eL~~~GI~vtlI~D- 168 (275)
T PRK08335 94 EAKREIGNIGSEL----IDDGDVIITHSFSSAVLEILKTAKRKGKRFKVILTESAPDYEGLALANELEFLGIEFEVITD- 168 (275)
T ss_pred HHHHHHHHHHHHH----cCCCCEEEEECCcHHHHHHHHHHHHcCCceEEEEecCCCchhHHHHHHHHHHCCCCEEEEec-
Confidence 4445554444332 2345678887766555555555544453 566554 655542 2234456877776541
Q ss_pred CCCCCCCChhHHHhhcCCCceEE-----EecCC--CCccccCCCHHHHHHHHHHHhhcCcEEEE
Q 014936 155 PDKGWEVDLDDIESLADQNTVAL-----VIINP--GNPCGNVYSYQHLQKLAETANKLKTLVIA 211 (415)
Q Consensus 155 ~~~~~~~~~~~l~~~~~~~~~~v-----~i~~p--~nptG~~~~~~~l~~i~~~~~~~~~~li~ 211 (415)
+ .+..+-+.+ .+.+ +..|. -|..|+. .++-+|+.|++++++
T Consensus 169 --s----a~~~~m~~v---d~VivGAD~I~~nG~v~NKiGT~-------~lA~~Ak~~~vPfyV 216 (275)
T PRK08335 169 --A----QLGLFAKEA---TLALVGADNVTRDGYVVNKAGTY-------LLALACHDNGVPFYV 216 (275)
T ss_pred --c----HHHHHHHhC---CEEEECccEEecCCCEeehhhHH-------HHHHHHHHcCCCEEE
Confidence 1 122222211 1222 22222 2555544 566677889988876
No 484
>cd06563 GH20_chitobiase-like The chitobiase of Serratia marcescens is a beta-N-1,4-acetylhexosaminidase with a glycosyl hydrolase family 20 (GH20) domain that hydrolyzes the beta-1,4-glycosidic linkages in oligomers derived from chitin. Chitin is degraded by a two step process: i) a chitinase hydrolyzes the chitin to oligosaccharides and disaccharides such as di-N-acetyl-D-glucosamine and chitobiose, ii) chitobiase then further degrades these oligomers into monomers. This GH20 domain family includes an N-acetylglucosamidase (GlcNAcase A) from Pseudoalteromonas piscicida and an N-acetylhexosaminidase (SpHex) from Streptomyces plicatus. SpHex lacks the C-terminal PKD (polycystic kidney disease I)-like domain found in the chitobiases. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by solvent or the enzyme, but by the substrate itself.
Probab=28.45 E-value=60 Score=30.42 Aligned_cols=26 Identities=23% Similarity=0.461 Sum_probs=23.4
Q ss_pred ccccCCCHHHHHHHHHHHhhcCcEEE
Q 014936 185 PCGNVYSYQHLQKLAETANKLKTLVI 210 (415)
Q Consensus 185 ptG~~~~~~~l~~i~~~~~~~~~~li 210 (415)
+.|-.++.+++++|++.|+++|+-||
T Consensus 78 ~~~~~YT~~di~eiv~yA~~rgI~VI 103 (357)
T cd06563 78 PYGGFYTQEEIREIVAYAAERGITVI 103 (357)
T ss_pred ccCceECHHHHHHHHHHHHHcCCEEE
Confidence 45678999999999999999999887
No 485
>PRK13656 trans-2-enoyl-CoA reductase; Provisional
Probab=28.16 E-value=5.3e+02 Score=24.58 Aligned_cols=54 Identities=17% Similarity=0.166 Sum_probs=30.0
Q ss_pred CCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHH---HHHhcCCCCEEEEc
Q 014936 75 PTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVA---MALLSRPGANILLP 130 (415)
Q Consensus 75 ~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~---~~~l~~~gd~vi~~ 130 (415)
.|.|+.+--+.-.+|.+.. |........++..|++.++..+ ...| +.|..+++.
T Consensus 16 hp~gc~~~v~~qi~~~~~~-~~~~~ggK~aLVTGaSsGIGlA~~IA~al-~~GA~Vi~v 72 (398)
T PRK13656 16 HPVGCEANVKEQIEYVKAQ-GPIANGPKKVLVIGASSGYGLASRIAAAF-GAGADTLGV 72 (398)
T ss_pred CCHHHHHHHHHHHHHHHhc-CCcCCCCCEEEEECCCchHhHHHHHHHHH-HcCCeEEEE
Confidence 4567666666666666542 2111223455556666677666 4556 778765443
No 486
>PRK09441 cytoplasmic alpha-amylase; Reviewed
Probab=28.08 E-value=63 Score=31.71 Aligned_cols=28 Identities=21% Similarity=0.176 Sum_probs=25.6
Q ss_pred HHHHHHHHHHHhhcCcEEEEccccCCcc
Q 014936 192 YQHLQKLAETANKLKTLVIADEVYGHLV 219 (415)
Q Consensus 192 ~~~l~~i~~~~~~~~~~li~De~~~~~~ 219 (415)
.++++++++.|+++|+.||+|-+.-+..
T Consensus 80 ~~dl~~Li~~~H~~Gi~vi~D~V~NH~~ 107 (479)
T PRK09441 80 KEELLNAIDALHENGIKVYADVVLNHKA 107 (479)
T ss_pred HHHHHHHHHHHHHCCCEEEEEECccccc
Confidence 3999999999999999999999987755
No 487
>cd00951 KDGDH 5-dehydro-4-deoxyglucarate dehydratase, also called 5-keto-4-deoxy-glucarate dehydratase (KDGDH), which is member of dihydrodipicolinate synthase (DHDPS) family that comprises several pyruvate-dependent class I aldolases. The enzyme is involved in glucarate metabolism, and its mechanism presumbly involves a Schiff-base intermediate similar to members of DHDPS family. While in the case of Pseudomonas sp. 5-dehydro-4-deoxy-D-glucarate is degraded by KDGDH to 2,5-dioxopentanoate, in certain species of Enterobacteriaceae it is degraded instead to pyruvate and glycerate.
Probab=27.71 E-value=1.6e+02 Score=26.54 Aligned_cols=48 Identities=10% Similarity=0.007 Sum_probs=30.4
Q ss_pred CCCCCChhHHHhhcCC----CceEEEecCCCCccccCCCHHHHHHHHHHHhhc
Q 014936 157 KGWEVDLDDIESLADQ----NTVALVIINPGNPCGNVYSYQHLQKLAETANKL 205 (415)
Q Consensus 157 ~~~~~~~~~l~~~~~~----~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~ 205 (415)
.+..+|.+.+++.++. .... +++..++--+..++.++++++++.+.+.
T Consensus 14 ~dg~iD~~~l~~l~~~l~~~Gv~g-i~v~GstGE~~~Ls~eEr~~l~~~~~~~ 65 (289)
T cd00951 14 ADGSFDEDAYRAHVEWLLSYGAAA-LFAAGGTGEFFSLTPDEYAQVVRAAVEE 65 (289)
T ss_pred CCCCcCHHHHHHHHHHHHHcCCCE-EEECcCCcCcccCCHHHHHHHHHHHHHH
Confidence 3457888888766542 2333 3344444456778888888888876653
No 488
>cd01563 Thr-synth_1 Threonine synthase is a pyridoxal phosphate (PLP) dependent enzyme that catalyses the last reaction in the synthesis of threonine from aspartate. It proceeds by converting O-phospho-L-homoserine (OPH) into threonine and inorganic phosphate. In plants, OPH is an intermediate between the methionine and threonine/isoleucine pathways. Thus threonine synthase competes for OPH with cystathionine-gamma-synthase, the first enzyme in the methionine pathway. These enzymes are in general dimers. Members of this CD, Thr-synth_1, are widely distributed in bacteria, archaea and higher plants.
Probab=27.66 E-value=4.3e+02 Score=24.19 Aligned_cols=53 Identities=13% Similarity=-0.063 Sum_probs=34.1
Q ss_pred CCcEEEeCChHHHHHHHHHHhc-CCCCEEEEcCCCCcchHHHHHhCCCeEEEee
Q 014936 100 PNDVFVTSGCTQAIDVAMALLS-RPGANILLPRPGFPIYELSAAFRHIEVRHFD 152 (415)
Q Consensus 100 ~~~i~i~~g~~~al~~~~~~l~-~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~ 152 (415)
.+.|+..++|..+..++..+-. +-.-.|+++...-..-....+.+|+++..++
T Consensus 70 ~~~vv~~SsGN~g~alA~~a~~~G~~~~ivvp~~~~~~k~~~l~~~GA~Vi~~~ 123 (324)
T cd01563 70 VKAVACASTGNTSASLAAYAARAGIKCVVFLPAGKALGKLAQALAYGATVLAVE 123 (324)
T ss_pred CCEEEEeCCCHHHHHHHHHHHHcCCceEEEEeCCCCHHHHHHHHHcCCEEEEEC
Confidence 4567777778777776654432 2224566665553445567788999998875
No 489
>PF10609 ParA: ParA/MinD ATPase like; InterPro: IPR019591 This entry represents ATPases involved in plasmid partitioning []. It also contains cytosolic Fe-S cluster assembling factors, NBP35 and CFD1 which are required for biogenesis and export of both ribosomal subunits probably through assembling the ISCs in RLI1, a protein which performs rRNA processing and ribosome export [, , ].; PDB: 2PH1_A 3KB1_B.
Probab=27.37 E-value=2.3e+02 Score=20.03 Aligned_cols=33 Identities=15% Similarity=0.304 Sum_probs=23.1
Q ss_pred CceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEE
Q 014936 173 NTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVI 210 (415)
Q Consensus 173 ~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li 210 (415)
...+++++.|+. ++..+.++..++|++.++.++
T Consensus 25 ~~g~ivVTTPq~-----la~~dv~r~~~~~~~~~vpil 57 (81)
T PF10609_consen 25 IDGAIVVTTPQE-----LALADVRRAIDMFRKLNVPIL 57 (81)
T ss_dssp -SEEEEEE-CCC-------HHHHHHHHHHHHCTT-EEE
T ss_pred CCeEEEEeCCHH-----HHHHHHHHHHHHHHhcCCCcE
Confidence 456788888875 456789999999999998765
No 490
>COG0505 CarA Carbamoylphosphate synthase small subunit [Amino acid transport and metabolism / Nucleotide transport and metabolism]
Probab=27.29 E-value=1.8e+02 Score=26.96 Aligned_cols=71 Identities=18% Similarity=0.237 Sum_probs=45.8
Q ss_pred CCCCEEEEcCCCCc-chHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecC-CCCccccCCCHHHHHHHH
Q 014936 122 RPGANILLPRPGFP-IYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIIN-PGNPCGNVYSYQHLQKLA 199 (415)
Q Consensus 122 ~~gd~vi~~~p~y~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~-p~nptG~~~~~~~l~~i~ 199 (415)
+++.+|++.+.+.- ++...+...|+++..+|.+ .+.+++.+. ++..|+++| |.+|.-.. +.+..|.
T Consensus 177 ~~~~~Vv~iD~GvK~nIlr~L~~rg~~vtVVP~~------t~~eeIl~~---~pDGiflSNGPGDP~~~~---~~i~~ik 244 (368)
T COG0505 177 EPGKHVVVIDFGVKRNILRELVKRGCRVTVVPAD------TSAEEILAL---NPDGIFLSNGPGDPAPLD---YAIETIK 244 (368)
T ss_pred CCCcEEEEEEcCccHHHHHHHHHCCCeEEEEcCC------CCHHHHHhh---CCCEEEEeCCCCChhHHH---HHHHHHH
Confidence 34557777666654 6777788899999998863 366766553 567888775 57885444 3444444
Q ss_pred HHHhh
Q 014936 200 ETANK 204 (415)
Q Consensus 200 ~~~~~ 204 (415)
++...
T Consensus 245 ~l~~~ 249 (368)
T COG0505 245 ELLGT 249 (368)
T ss_pred HHhcc
Confidence 44443
No 491
>TIGR00655 PurU formyltetrahydrofolate deformylase. This model describes formyltetrahydrofolate deformylases. The enzyme is a homohexamer. Sequences from a related enzyme formyl tetrahydrofolate-specific enzyme, phosphoribosylglycinamide formyltransferase, serve as an outgroup for phylogenetic analysis. Putative members of this family, scoring below the trusted cutoff, include a sequence from Rhodobacter capsulatus that lacks an otherwise conserved C-terminal region.
Probab=27.11 E-value=4.7e+02 Score=23.57 Aligned_cols=75 Identities=9% Similarity=-0.093 Sum_probs=41.9
Q ss_pred cHHHHHHHHHHHhhhCCCC-------CCCCcEEEeCChHHHHHHHHHHhcCCC--CEEEEcCCCCcchHHHHHhCCCeEE
Q 014936 79 LPLTRRAIAEYLSRDLPYK-------LTPNDVFVTSGCTQAIDVAMALLSRPG--ANILLPRPGFPIYELSAAFRHIEVR 149 (415)
Q Consensus 79 ~~~lr~~ia~~~~~~~~~~-------~~~~~i~i~~g~~~al~~~~~~l~~~g--d~vi~~~p~y~~~~~~~~~~g~~~~ 149 (415)
..++++.+.+.+.+.++.. -...=.++.||..+.+..++....... -.|.+.-..++.....++..|+...
T Consensus 57 ~~~l~~~l~~~~~~~~~l~i~l~~~~~~~ki~vl~Sg~g~nl~~l~~~~~~g~l~~~i~~visn~~~~~~~A~~~gIp~~ 136 (280)
T TIGR00655 57 ESSLLAAFKSALAEKFEMTWELILADKLKRVAILVSKEDHCLGDLLWRWYSGELDAEIALVISNHEDLRSLVERFGIPFH 136 (280)
T ss_pred HHHHHHHHHHHHHHHhCCEEEEecCCCCcEEEEEEcCCChhHHHHHHHHHcCCCCcEEEEEEEcChhHHHHHHHhCCCEE
Confidence 5677777666333333311 122234677887888888887764321 2333222233334456888999887
Q ss_pred Eeec
Q 014936 150 HFDL 153 (415)
Q Consensus 150 ~~~~ 153 (415)
.++.
T Consensus 137 ~~~~ 140 (280)
T TIGR00655 137 YIPA 140 (280)
T ss_pred EcCC
Confidence 7764
No 492
>PRK12313 glycogen branching enzyme; Provisional
Probab=26.94 E-value=94 Score=31.80 Aligned_cols=30 Identities=23% Similarity=0.168 Sum_probs=26.9
Q ss_pred CCHHHHHHHHHHHhhcCcEEEEccccCCcc
Q 014936 190 YSYQHLQKLAETANKLKTLVIADEVYGHLV 219 (415)
Q Consensus 190 ~~~~~l~~i~~~~~~~~~~li~De~~~~~~ 219 (415)
-+.++++++++.|+++|+-||.|-++.+..
T Consensus 217 Gt~~d~k~lv~~~H~~Gi~VilD~V~nH~~ 246 (633)
T PRK12313 217 GTPEDFMYLVDALHQNGIGVILDWVPGHFP 246 (633)
T ss_pred CCHHHHHHHHHHHHHCCCEEEEEECCCCCC
Confidence 367899999999999999999999988764
No 493
>COG2515 Acd 1-aminocyclopropane-1-carboxylate deaminase [Amino acid transport and metabolism]
Probab=26.86 E-value=4.9e+02 Score=23.76 Aligned_cols=103 Identities=17% Similarity=0.179 Sum_probs=60.8
Q ss_pred CCcEEEeCChHHHHHHHHHHhc--CCC--CEEEEcCCC--Cc--chHHHHHhCCCeEEEeeccCCCCC--CCChhHHHhh
Q 014936 100 PNDVFVTSGCTQAIDVAMALLS--RPG--ANILLPRPG--FP--IYELSAAFRHIEVRHFDLLPDKGW--EVDLDDIESL 169 (415)
Q Consensus 100 ~~~i~i~~g~~~al~~~~~~l~--~~g--d~vi~~~p~--y~--~~~~~~~~~g~~~~~~~~~~~~~~--~~~~~~l~~~ 169 (415)
....++|-|+.+++.+-..+.. +-| ...++..+. |. +........|..+..++. ..++ ....+.+.+.
T Consensus 63 g~dTlvT~GgiQSNh~r~tAavA~~lGl~~v~ile~~~~~y~~ngn~Ll~~l~G~~~~~~~~--~~d~~~~~~~~~~~e~ 140 (323)
T COG2515 63 GADTLVTYGGIQSNHVRQTAAVAAKLGLKCVLILENIEANYLLNGNLLLSKLMGAEVRAVDA--GTDIGINASAEELAEE 140 (323)
T ss_pred CCcEEEEecccchhHHHHHHHHHHhcCCcEEEEEeccccccccccchhhhhhcCceEEEecC--CCChhhchhhHHHHHH
Confidence 4468999999888776555543 333 344455544 32 234455778999888764 2333 2345555554
Q ss_pred cCCC--ceEEEecCCCCccccCCCHHHHHHHHHHHhh
Q 014936 170 ADQN--TVALVIINPGNPCGNVYSYQHLQKLAETANK 204 (415)
Q Consensus 170 ~~~~--~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~ 204 (415)
++.+ ..-++.....||.|..-=.+-..||.+.+++
T Consensus 141 ~~~~g~kpyvIp~GG~~~~g~lGyv~~a~Ei~~Q~~~ 177 (323)
T COG2515 141 VRKQGGKPYVIPEGGSSPLGALGYVRLALEIAEQAEQ 177 (323)
T ss_pred HHhcCCCCcEeccCCcCccccccHHHHHHHHHHHHhh
Confidence 4432 3344554557886655333777888888875
No 494
>PLN02960 alpha-amylase
Probab=26.81 E-value=93 Score=32.82 Aligned_cols=36 Identities=19% Similarity=0.159 Sum_probs=30.1
Q ss_pred ccccCCCHHHHHHHHHHHhhcCcEEEEccccCCccc
Q 014936 185 PCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVF 220 (415)
Q Consensus 185 ptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~ 220 (415)
|.+..-+.++++++++.|+++|+-||+|-++.++.-
T Consensus 458 ~~~~yGtp~dfk~LVd~aH~~GI~VILDvV~NH~~~ 493 (897)
T PLN02960 458 VSSRFGTPDDFKRLVDEAHGLGLLVFLDIVHSYAAA 493 (897)
T ss_pred cccccCCHHHHHHHHHHHHHCCCEEEEEecccccCC
Confidence 344445779999999999999999999999988653
No 495
>TIGR02717 AcCoA-syn-alpha acetyl coenzyme A synthetase (ADP forming), alpha domain. Although technically reversible, it is believed that this group of ADP-dependent acetyl-CoA synthetases (ACS) act in the direction of acetate and ATP production in the organisms in which it has been characterized. In most species this protein exists as a fused alpha-beta domain polypeptide. In Pyrococcus and related species, however the domains exist as separate polypeptides. This model represents the alpha (N-terminal) domain. In Pyrococcus and related species there appears to have been the development of a paralogous family such that four other proteins are close relatives. In reference, one of these (along with its beta-domain partner) was characterized as ACS-II showing specificity for phenylacetyl-CoA. This model has been constructed to exclude these non-ACS-I paralogs. This may result in new, authentic ACS-I sequences falling below the trusted cutoff.
Probab=26.56 E-value=2.4e+02 Score=27.41 Aligned_cols=58 Identities=17% Similarity=0.170 Sum_probs=36.5
Q ss_pred ChhHHHhhcCCCceEEEecCC-CCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCccc
Q 014936 162 DLDDIESLADQNTVALVIINP-GNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVF 220 (415)
Q Consensus 162 ~~~~l~~~~~~~~~~v~i~~p-~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~ 220 (415)
-.+.++++.+...+.+++... -..+|.- ..+.-+++.+.|+++|+.++--.+.+....
T Consensus 77 ~~~~l~e~~~~gv~~~vi~s~gf~e~g~~-g~~~~~~l~~~a~~~girvlGPnc~G~~~~ 135 (447)
T TIGR02717 77 VPQVVEECGEKGVKGAVVITAGFKEVGEE-GAELEQELVEIARKYGMRLLGPNCLGIINT 135 (447)
T ss_pred HHHHHHHHHhcCCCEEEEECCCccccCcc-hHHHHHHHHHHHHHcCCEEEecCeeeEecC
Confidence 356667666666666655433 2233321 112347899999999999998888766543
No 496
>PF03460 NIR_SIR_ferr: Nitrite/Sulfite reductase ferredoxin-like half domain; InterPro: IPR005117 Sulphite reductases (SiRs) and related nitrite reductases (NiRs) catalyse the six-electron reduction reactions of sulphite to sulphide, and nitrite to ammonia, respectively. The Escherichia coli SiR enzyme is a complex composed of two proteins, a flavoprotein alpha-component (SiR-FP) and a hemoprotein beta-component (SiR-HP), and has an alpha(8)beta(4) quaternary structure []. SiR-FP contains both FAD and FMN, while SiR-HP contains a Fe(4)S(4) cluster coupled to a sirohaem through a cysteine bridge. Electrons are transferred from NADPH to FAD, and on to FMN in SiR-FP, from which they are transferred to the metal centre of SiR-HP, where they reduce the siroheme-bound sulphite. SiR-HP has a two-fold symmetry, which generates a distinctive three-domain alpha/beta fold that controls assembly and reactivity []. This entry describes the ferrodoxin-like (alpha/beta sandwich) domain, which consists of a duplication containing two subdomains of this fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3B0H_A 4GEP_A 2GEP_A 2AOP_A 5AOP_A 6GEP_A 4AOP_A 1AOP_A 3AOP_A 8GEP_A ....
Probab=26.53 E-value=46 Score=22.30 Aligned_cols=25 Identities=36% Similarity=0.432 Sum_probs=19.6
Q ss_pred CCCCccccCCCHHHHHHHHHHHhhcC
Q 014936 181 NPGNPCGNVYSYQHLQKLAETANKLK 206 (415)
Q Consensus 181 ~p~nptG~~~~~~~l~~i~~~~~~~~ 206 (415)
.+.-|.|.+ +.+.++.|++++++++
T Consensus 13 ~~~~~~G~i-~~~~l~~la~ia~~yg 37 (69)
T PF03460_consen 13 RIRIPGGRI-SAEQLRALAEIAEKYG 37 (69)
T ss_dssp EEB-GGGEE-EHHHHHHHHHHHHHHS
T ss_pred EEeCCCEEE-CHHHHHHHHHHHHHhC
Confidence 334456777 7799999999999987
No 497
>PF00408 PGM_PMM_IV: Phosphoglucomutase/phosphomannomutase, C-terminal domain; InterPro: IPR005843 The alpha-D-phosphohexomutase superfamily is composed of four related enzymes, each of which catalyses a phosphoryl transfer on their sugar substrates: phosphoglucomutase (PGM), phosphoglucomutase/phosphomannomutase (PGM/PMM), phosphoglucosamine mutase (PNGM), and phosphoacetylglucosamine mutase (PAGM) []. PGM (5.4.2.2 from EC) converts D-glucose 1-phosphate into D-glucose 6-phosphate, and participates in both the breakdown and synthesis of glucose []. PGM/PMM (5.4.2.2 from EC; 5.4.2.8 from EC) are primarily bacterial enzymes that use either glucose or mannose as substrate, participating in the biosynthesis of a variety of carbohydrates such as lipopolysaccharides and alginate [, ]. Both PNGM (5.4.2.3 from EC) and PAGM (5.4.2.10 from EC) are involved in the biosynthesis of UDP-N-acetylglucosamine [, ]. Despite differences in substrate specificity, these enzymes share a similar catalytic mechanism, converting 1-phospho-sugars to 6-phospho-sugars via a biphosphorylated 1,6-phospho-sugar. The active enzyme is phosphorylated at a conserved serine residue and binds one magnesium ion; residues around the active site serine are well conserved among family members. The reaction mechanism involves phosphoryl transfer from the phosphoserine to the substrate to create a biophosphorylated sugar, followed by a phosphoryl transfer from the substrate back to the enzyme []. The structures of PGM and PGM/PMM have been determined, and were found to be very similar in topology. These enzymes are both composed of four domains and a large central active site cleft, where each domain contains residues essential for catalysis and/or substrate recognition. Domain I contains the catalytic phosphoserine, domain II contains a metal-binding loop to coordinate the magnesium ion, domain III contains the sugar-binding loop that recognises the two different binding orientations of the 1- and 6-phospho-sugars, and domain IV contains a phosphate-binding site required for orienting the incoming phospho-sugar substrate. This entry represents the C-terminal domain alpha-D-phosphohexomutase enzymes.; GO: 0016868 intramolecular transferase activity, phosphotransferases, 0005975 carbohydrate metabolic process; PDB: 1KFQ_B 1KFI_A 3PDK_B 2F7L_A 1TUO_A 2FKM_X 3C04_A 1K2Y_X 1P5G_X 2H4L_X ....
Probab=26.52 E-value=2.1e+02 Score=19.36 Aligned_cols=27 Identities=30% Similarity=0.279 Sum_probs=21.9
Q ss_pred CCeEEEEe-eCChhhHHHHHHHHHHHHH
Q 014936 380 KNWLRVTF-AVDPYSLEECLDRIKSFYQ 406 (415)
Q Consensus 380 ~~~iRi~~-~~~~~~l~~~l~~l~~~~~ 406 (415)
...+|+-+ +.+.+.++...+.+.+.++
T Consensus 46 EP~iRv~~Ea~~~~~~~~~~~~i~~~ik 73 (73)
T PF00408_consen 46 EPKIRVYVEAPDEEELEEIAEEIAEAIK 73 (73)
T ss_dssp SSEEEEEEEESSHHHHHHHHHHHHHHHH
T ss_pred CceEEEEEEeCCHHHHHHHHHHHHHhhC
Confidence 57899999 7788888888888877653
No 498
>TIGR01515 branching_enzym alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase. A sequence from Arabidopsis thaliana, GP|9294564, scores just above trusted, but appears either to contain corrupt sequence or, more likely, to be a pseudogene as some of the conserved catalytic residues common to the alpha amylase family are not conserved here.
Probab=26.47 E-value=95 Score=31.61 Aligned_cols=31 Identities=19% Similarity=0.171 Sum_probs=27.2
Q ss_pred CCCHHHHHHHHHHHhhcCcEEEEccccCCcc
Q 014936 189 VYSYQHLQKLAETANKLKTLVIADEVYGHLV 219 (415)
Q Consensus 189 ~~~~~~l~~i~~~~~~~~~~li~De~~~~~~ 219 (415)
.-+.++++++++.|+++|+-||+|-++.+..
T Consensus 202 ~Gt~~dlk~lV~~~H~~Gi~VilD~V~NH~~ 232 (613)
T TIGR01515 202 FGTPDDFMYFVDACHQAGIGVILDWVPGHFP 232 (613)
T ss_pred cCCHHHHHHHHHHHHHCCCEEEEEecccCcC
Confidence 3356899999999999999999999988755
No 499
>PRK06027 purU formyltetrahydrofolate deformylase; Reviewed
Probab=26.27 E-value=4.9e+02 Score=23.51 Aligned_cols=76 Identities=11% Similarity=-0.002 Sum_probs=44.3
Q ss_pred CCcHHHHHHHHHHHhhhCCC------CCCCCcE-EEeCChHHHHHHHHHHhcC---CCCEEEEcCCCCcchHHHHHhCCC
Q 014936 77 AGLPLTRRAIAEYLSRDLPY------KLTPNDV-FVTSGCTQAIDVAMALLSR---PGANILLPRPGFPIYELSAAFRHI 146 (415)
Q Consensus 77 ~g~~~lr~~ia~~~~~~~~~------~~~~~~i-~i~~g~~~al~~~~~~l~~---~gd~vi~~~p~y~~~~~~~~~~g~ 146 (415)
....+|++.+.+.-.+ ++. ...+-+| ++.+|....+..++.+... +.+.+++.. ........++..|+
T Consensus 61 ~~~~~L~~~L~~l~~~-l~l~i~l~~~~~~~ri~vl~Sg~gsnl~al~~~~~~~~~~~~i~~vis-n~~~~~~lA~~~gI 138 (286)
T PRK06027 61 FNLETLRADFAALAEE-FEMDWRLLDSAERKRVVILVSKEDHCLGDLLWRWRSGELPVEIAAVIS-NHDDLRSLVERFGI 138 (286)
T ss_pred CCHHHHHHHHHHHHHH-hCCEEEEcccccCcEEEEEEcCCCCCHHHHHHHHHcCCCCcEEEEEEE-cChhHHHHHHHhCC
Confidence 4467788777765543 221 1233344 5677777777877777643 223333222 22344556888999
Q ss_pred eEEEeecc
Q 014936 147 EVRHFDLL 154 (415)
Q Consensus 147 ~~~~~~~~ 154 (415)
.+..++..
T Consensus 139 p~~~~~~~ 146 (286)
T PRK06027 139 PFHHVPVT 146 (286)
T ss_pred CEEEeccC
Confidence 98887654
No 500
>PRK15452 putative protease; Provisional
Probab=26.19 E-value=1.6e+02 Score=28.55 Aligned_cols=25 Identities=8% Similarity=0.030 Sum_probs=12.5
Q ss_pred eEEEEe-eCChhhHHHHHHHHHHHHH
Q 014936 382 WLRVTF-AVDPYSLEECLDRIKSFYQ 406 (415)
Q Consensus 382 ~iRi~~-~~~~~~l~~~l~~l~~~~~ 406 (415)
.+||-. ..+.+.+...++.-.+++.
T Consensus 284 s~KIEgR~ks~~yv~~vv~~YR~ald 309 (443)
T PRK15452 284 SLKIEGRTKSFYYVARTAQVYRKAID 309 (443)
T ss_pred EEEEEeeeCCHHHHHHHHHHHHHHHH
Confidence 455555 2345555555554444443
Done!