Query 014936
Match_columns 415
No_of_seqs 173 out of 2194
Neff 10.4
Searched_HMMs 29240
Date Mon Mar 25 03:46:20 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014936.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/014936hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3dyd_A Tyrosine aminotransfera 100.0 7.7E-53 2.6E-57 403.3 39.2 388 16-409 38-425 (427)
2 1b5p_A Protein (aspartate amin 100.0 2E-52 7E-57 395.2 36.3 379 1-406 1-383 (385)
3 1bw0_A TAT, protein (tyrosine 100.0 1.4E-50 4.8E-55 386.7 38.6 372 34-409 32-414 (416)
4 1j32_A Aspartate aminotransfer 100.0 1.8E-50 6.3E-55 382.4 36.1 384 1-408 1-387 (388)
5 3h14_A Aminotransferase, class 100.0 6.9E-50 2.4E-54 378.8 37.7 378 1-410 3-384 (391)
6 2x5d_A Probable aminotransfera 100.0 2.4E-49 8.2E-54 377.6 35.8 386 1-408 8-398 (412)
7 1gd9_A Aspartate aminotransfer 100.0 5.8E-49 2E-53 372.2 37.3 379 1-407 1-385 (389)
8 3fvs_A Kynurenine--oxoglutarat 100.0 1.3E-49 4.4E-54 380.8 33.2 381 2-407 5-421 (422)
9 3ele_A Amino transferase; RER0 100.0 2.7E-49 9.4E-54 375.6 34.7 381 1-408 2-396 (398)
10 3aow_A Putative uncharacterize 100.0 6.3E-49 2.1E-53 377.7 34.5 354 34-409 75-446 (448)
11 3b46_A Aminotransferase BNA3; 100.0 3.8E-49 1.3E-53 379.8 30.5 356 33-403 55-442 (447)
12 1o4s_A Aspartate aminotransfer 100.0 2.8E-48 9.5E-53 367.4 35.4 347 33-406 39-387 (389)
13 3jtx_A Aminotransferase; NP_28 100.0 2.6E-48 9E-53 368.6 35.3 348 32-405 27-395 (396)
14 3e2y_A Kynurenine-oxoglutarate 100.0 1.1E-48 3.9E-53 372.8 31.4 356 33-403 21-408 (410)
15 1u08_A Hypothetical aminotrans 100.0 7.9E-48 2.7E-52 364.1 36.7 349 35-403 30-385 (386)
16 2o1b_A Aminotransferase, class 100.0 5.4E-49 1.9E-53 374.0 28.8 352 34-407 46-402 (404)
17 3nra_A Aspartate aminotransfer 100.0 3.9E-48 1.3E-52 368.8 33.7 356 36-408 40-405 (407)
18 2o0r_A RV0858C (N-succinyldiam 100.0 3.5E-48 1.2E-52 369.5 32.2 380 1-409 1-397 (411)
19 3tcm_A Alanine aminotransferas 100.0 1.9E-47 6.5E-52 372.1 37.9 371 36-412 65-498 (500)
20 1xi9_A Putative transaminase; 100.0 4.4E-48 1.5E-52 368.2 32.6 364 33-409 36-404 (406)
21 3ihj_A Alanine aminotransferas 100.0 9.6E-48 3.3E-52 373.5 33.8 370 36-412 64-497 (498)
22 3fdb_A Beta C-S lyase, putativ 100.0 2.8E-48 9.7E-53 365.9 29.2 350 33-407 21-375 (377)
23 3dzz_A Putative pyridoxal 5'-p 100.0 1.7E-47 5.8E-52 362.4 34.6 355 34-408 26-389 (391)
24 2dou_A Probable N-succinyldiam 100.0 7.2E-48 2.5E-52 363.0 31.6 349 33-405 23-375 (376)
25 3kax_A Aminotransferase, class 100.0 3.3E-47 1.1E-51 359.3 35.9 353 33-405 22-382 (383)
26 1yiz_A Kynurenine aminotransfe 100.0 3.1E-47 1.1E-51 365.0 33.7 359 34-406 36-427 (429)
27 2z61_A Probable aspartate amin 100.0 7.3E-47 2.5E-51 355.4 35.5 364 3-406 2-369 (370)
28 3ezs_A Aminotransferase ASPB; 100.0 1.8E-47 6.1E-52 360.3 30.4 342 33-408 22-375 (376)
29 1c7n_A Cystalysin; transferase 100.0 6.1E-47 2.1E-51 359.6 34.1 356 35-410 31-395 (399)
30 4dq6_A Putative pyridoxal phos 100.0 1.9E-46 6.3E-51 355.2 36.0 351 34-405 31-390 (391)
31 2r2n_A Kynurenine/alpha-aminoa 100.0 6.4E-48 2.2E-52 369.1 26.0 376 3-407 7-423 (425)
32 3qgu_A LL-diaminopimelate amin 100.0 4.2E-47 1.5E-51 366.2 31.6 356 33-408 67-440 (449)
33 3k7y_A Aspartate aminotransfer 100.0 1.2E-46 4.2E-51 355.3 33.4 368 5-406 6-403 (405)
34 2gb3_A Aspartate aminotransfer 100.0 4E-46 1.4E-50 354.9 37.2 376 3-409 16-403 (409)
35 2zc0_A Alanine glyoxylate tran 100.0 4.2E-46 1.4E-50 354.8 37.3 381 3-409 7-405 (407)
36 1d2f_A MALY protein; aminotran 100.0 2.9E-46 1E-50 353.8 35.4 353 35-408 28-389 (390)
37 3piu_A 1-aminocyclopropane-1-c 100.0 1.3E-46 4.5E-51 361.2 32.3 375 20-409 22-433 (435)
38 1v2d_A Glutamine aminotransfer 100.0 1.8E-46 6.1E-51 354.2 32.2 366 1-411 1-374 (381)
39 1vp4_A Aminotransferase, putat 100.0 7.3E-47 2.5E-51 361.8 29.7 357 34-411 42-421 (425)
40 4f4e_A Aromatic-amino-acid ami 100.0 1.4E-46 4.7E-51 359.3 30.9 372 1-405 22-419 (420)
41 3l8a_A METC, putative aminotra 100.0 1.8E-46 6.3E-51 358.6 30.6 353 34-406 60-420 (421)
42 3ei9_A LL-diaminopimelate amin 100.0 3.8E-46 1.3E-50 357.7 32.0 353 33-406 54-426 (432)
43 1iay_A ACC synthase 2, 1-amino 100.0 1.2E-45 4E-50 353.9 34.5 390 3-407 2-426 (428)
44 3ffh_A Histidinol-phosphate am 100.0 3.8E-45 1.3E-49 342.8 36.9 333 33-404 30-362 (363)
45 2zyj_A Alpha-aminodipate amino 100.0 9.3E-46 3.2E-50 351.1 32.3 371 3-410 10-395 (397)
46 3g0t_A Putative aminotransfera 100.0 8.3E-46 2.8E-50 356.0 31.8 352 33-407 42-436 (437)
47 3t18_A Aminotransferase class 100.0 3.2E-45 1.1E-49 349.2 31.4 379 1-409 6-411 (413)
48 2x5f_A Aspartate_tyrosine_phen 100.0 8.7E-46 3E-50 355.0 26.9 348 35-408 47-429 (430)
49 3ly1_A Putative histidinol-pho 100.0 7.2E-45 2.5E-49 339.7 32.3 335 33-407 14-351 (354)
50 3get_A Histidinol-phosphate am 100.0 8.4E-45 2.9E-49 340.7 32.0 333 34-405 29-364 (365)
51 3euc_A Histidinol-phosphate am 100.0 5.2E-44 1.8E-48 335.6 36.4 331 34-405 29-365 (367)
52 3rq1_A Aminotransferase class 100.0 1.1E-44 3.8E-49 346.1 32.0 378 4-408 10-415 (418)
53 3asa_A LL-diaminopimelate amin 100.0 5E-45 1.7E-49 346.4 28.3 352 33-408 31-393 (400)
54 7aat_A Aspartate aminotransfer 100.0 1.7E-44 5.8E-49 342.9 30.9 361 16-405 14-400 (401)
55 3fsl_A Aromatic-amino-acid ami 100.0 1.8E-44 6.3E-49 342.3 31.0 358 16-404 12-396 (397)
56 3g7q_A Valine-pyruvate aminotr 100.0 9.3E-45 3.2E-49 346.5 28.7 383 1-410 2-415 (417)
57 3d6k_A Putative aminotransfera 100.0 3.3E-45 1.1E-49 349.9 23.6 348 36-410 33-420 (422)
58 1fg7_A Histidinol phosphate am 100.0 9E-44 3.1E-48 332.3 32.4 322 35-403 29-353 (356)
59 3op7_A Aminotransferase class 100.0 3.1E-44 1.1E-48 338.1 28.5 325 60-409 47-372 (375)
60 3ppl_A Aspartate aminotransfer 100.0 1.4E-44 4.7E-49 346.3 26.2 351 33-410 31-422 (427)
61 1lc5_A COBD, L-threonine-O-3-p 100.0 3E-43 1E-47 329.9 34.4 336 33-408 22-360 (364)
62 1ajs_A Aspartate aminotransfer 100.0 4.2E-44 1.4E-48 341.5 28.7 369 5-407 7-410 (412)
63 3if2_A Aminotransferase; YP_26 100.0 2.4E-44 8.1E-49 346.5 26.8 386 1-410 2-442 (444)
64 1yaa_A Aspartate aminotransfer 100.0 3.2E-44 1.1E-48 342.2 27.5 374 1-407 2-410 (412)
65 3meb_A Aspartate aminotransfer 100.0 3.5E-43 1.2E-47 338.1 33.1 374 3-407 24-443 (448)
66 3ftb_A Histidinol-phosphate am 100.0 8.5E-43 2.9E-47 326.6 34.3 333 33-405 24-358 (361)
67 3b1d_A Betac-S lyase; HET: PLP 100.0 1E-47 3.4E-52 364.0 0.0 351 36-406 32-391 (392)
68 3ez1_A Aminotransferase MOCR f 100.0 4.5E-44 1.6E-48 342.4 23.4 352 33-411 23-418 (423)
69 3f6t_A Aspartate aminotransfer 100.0 1.9E-43 6.5E-48 345.9 27.8 360 36-413 104-530 (533)
70 2q7w_A Aspartate aminotransfer 100.0 2.9E-43 9.8E-48 333.9 24.8 349 34-404 25-395 (396)
71 2zy4_A L-aspartate beta-decarb 100.0 1.8E-42 6.1E-47 338.9 30.6 351 37-411 106-525 (546)
72 4eu1_A Mitochondrial aspartate 100.0 2.8E-43 9.5E-48 335.4 24.2 363 5-405 18-408 (409)
73 3cq5_A Histidinol-phosphate am 100.0 2.6E-41 8.9E-46 317.4 33.8 331 37-406 32-366 (369)
74 3fkd_A L-threonine-O-3-phospha 100.0 5.8E-42 2E-46 319.5 28.4 326 33-407 13-341 (350)
75 2ay1_A Aroat, aromatic amino a 100.0 2.3E-42 7.9E-47 327.5 24.1 365 8-404 6-392 (394)
76 3p1t_A Putative histidinol-pho 100.0 1.7E-40 5.7E-45 308.0 34.8 321 33-405 14-334 (337)
77 3hdo_A Histidinol-phosphate am 100.0 1.2E-40 4.1E-45 311.8 33.8 329 33-407 24-354 (360)
78 3bwn_A AT1G70560, L-tryptophan 100.0 2.2E-43 7.7E-48 333.4 14.1 331 33-408 20-387 (391)
79 4h51_A Aspartate aminotransfer 100.0 2.2E-41 7.4E-46 319.2 27.1 376 1-410 15-419 (420)
80 2hox_A ALLIIN lyase 1; cystein 100.0 3.3E-42 1.1E-46 328.5 20.3 333 32-407 53-424 (427)
81 1uu1_A Histidinol-phosphate am 100.0 8.6E-40 2.9E-44 302.9 27.8 316 35-404 19-334 (335)
82 3a2b_A Serine palmitoyltransfe 100.0 9.3E-38 3.2E-42 296.2 30.2 337 33-408 41-392 (398)
83 1t3i_A Probable cysteine desul 100.0 3.3E-36 1.1E-40 287.5 26.0 334 34-408 26-413 (420)
84 3tqx_A 2-amino-3-ketobutyrate 100.0 1.1E-35 3.7E-40 282.1 28.0 334 34-408 42-396 (399)
85 1vjo_A Alanine--glyoxylate ami 100.0 7.3E-36 2.5E-40 282.7 25.8 319 51-405 43-392 (393)
86 1kmj_A Selenocysteine lyase; p 100.0 8.9E-36 3E-40 283.2 25.4 333 34-408 21-405 (406)
87 2dr1_A PH1308 protein, 386AA l 100.0 3.2E-35 1.1E-39 277.6 28.4 325 51-411 29-382 (386)
88 1bs0_A Protein (8-amino-7-oxon 100.0 3.5E-35 1.2E-39 277.2 27.3 329 34-404 38-383 (384)
89 2w8t_A SPT, serine palmitoyltr 100.0 9.6E-35 3.3E-39 277.8 29.3 335 33-409 62-416 (427)
90 1eg5_A Aminotransferase; PLP-d 100.0 3.5E-35 1.2E-39 277.0 24.8 331 38-409 3-377 (384)
91 1e5e_A MGL, methionine gamma-l 100.0 1.5E-33 5E-38 267.2 35.7 315 38-409 21-396 (404)
92 2bwn_A 5-aminolevulinate synth 100.0 6.8E-35 2.3E-39 276.8 24.7 334 34-407 45-399 (401)
93 1elu_A L-cysteine/L-cystine C- 100.0 3.9E-35 1.3E-39 277.3 22.0 330 35-404 15-388 (390)
94 1fc4_A 2-amino-3-ketobutyrate 100.0 1.2E-34 3.9E-39 275.2 25.0 332 33-408 43-397 (401)
95 2huf_A Alanine glyoxylate amin 100.0 1.7E-34 5.6E-39 273.4 25.3 332 34-410 17-385 (393)
96 3kki_A CAI-1 autoinducer synth 100.0 9.1E-34 3.1E-38 269.7 28.8 331 33-407 57-403 (409)
97 2z9v_A Aspartate aminotransfer 100.0 4.7E-34 1.6E-38 270.2 26.6 330 38-409 10-372 (392)
98 2e7j_A SEP-tRNA:Cys-tRNA synth 100.0 1.3E-35 4.6E-40 278.7 15.7 324 34-407 6-369 (371)
99 3f9t_A TDC, L-tyrosine decarbo 100.0 1.5E-33 5.2E-38 266.9 28.9 322 51-406 40-396 (397)
100 4eb5_A Probable cysteine desul 100.0 1.5E-33 5.1E-38 265.7 28.5 328 51-411 10-376 (382)
101 2ch1_A 3-hydroxykynurenine tra 100.0 4.9E-34 1.7E-38 270.4 23.7 321 51-409 27-384 (396)
102 1iug_A Putative aspartate amin 100.0 9.4E-34 3.2E-38 264.1 25.0 316 51-408 10-348 (352)
103 2eh6_A Acoat, acetylornithine 100.0 1E-33 3.5E-38 266.2 24.7 322 33-404 26-374 (375)
104 3lvm_A Cysteine desulfurase; s 100.0 1.2E-33 4.1E-38 270.2 25.3 333 32-410 18-401 (423)
105 4hvk_A Probable cysteine desul 100.0 6.3E-33 2.1E-37 261.3 29.8 328 51-412 10-377 (382)
106 1sff_A 4-aminobutyrate aminotr 100.0 4.5E-34 1.5E-38 273.4 21.2 347 33-408 39-424 (426)
107 4adb_A Succinylornithine trans 100.0 1.5E-33 5.2E-38 267.9 23.7 336 33-410 37-402 (406)
108 3zrp_A Serine-pyruvate aminotr 100.0 3.4E-33 1.2E-37 263.4 25.2 319 51-409 11-364 (384)
109 1v72_A Aldolase; PLP-dependent 100.0 8.6E-34 2.9E-38 264.8 20.5 329 34-408 6-353 (356)
110 3nnk_A Ureidoglycine-glyoxylat 100.0 7.9E-33 2.7E-37 263.4 26.3 320 51-408 22-390 (411)
111 1svv_A Threonine aldolase; str 100.0 7.5E-33 2.6E-37 258.6 25.3 331 34-407 12-357 (359)
112 3cai_A Possible aminotransfera 100.0 8.2E-33 2.8E-37 262.9 25.9 327 36-403 26-404 (406)
113 2ord_A Acoat, acetylornithine 100.0 7.2E-34 2.5E-38 269.4 18.3 330 33-406 38-395 (397)
114 2yrr_A Aminotransferase, class 100.0 2.1E-33 7.1E-38 261.8 20.8 317 51-406 9-351 (353)
115 3isl_A Purine catabolism prote 100.0 3E-32 1E-36 259.8 27.8 320 51-408 20-390 (416)
116 3ruy_A Ornithine aminotransfer 100.0 1.7E-32 5.9E-37 259.5 25.6 327 33-405 34-391 (392)
117 3kgw_A Alanine-glyoxylate amin 100.0 1.5E-32 5.2E-37 259.8 23.5 321 51-409 32-389 (393)
118 2aeu_A Hypothetical protein MJ 100.0 7.6E-32 2.6E-36 252.9 27.9 329 34-408 26-371 (374)
119 3i4j_A Aminotransferase, class 100.0 2.9E-32 1E-36 261.0 25.1 352 33-408 27-428 (430)
120 2eo5_A 419AA long hypothetical 100.0 8.5E-32 2.9E-36 256.7 27.7 339 33-407 40-417 (419)
121 1jg8_A L-ALLO-threonine aldola 100.0 1.4E-32 4.7E-37 255.8 21.7 326 34-407 2-345 (347)
122 1m32_A 2-aminoethylphosphonate 100.0 2.9E-32 9.9E-37 255.3 23.3 329 36-406 4-363 (366)
123 3f0h_A Aminotransferase; RER07 100.0 1.2E-31 4E-36 252.3 27.5 331 36-407 19-373 (376)
124 2pb2_A Acetylornithine/succiny 100.0 4.2E-32 1.4E-36 258.8 23.9 335 33-408 55-418 (420)
125 1vef_A Acetylornithine/acetyl- 100.0 1.9E-32 6.7E-37 259.3 21.4 336 33-405 43-394 (395)
126 1b9h_A AHBA synthase, protein 100.0 1E-30 3.5E-35 246.9 32.0 314 55-407 17-387 (388)
127 3ffr_A Phosphoserine aminotran 100.0 2.5E-31 8.7E-36 248.5 27.5 327 36-405 4-361 (362)
128 2ez2_A Beta-tyrosinase, tyrosi 100.0 3.1E-31 1.1E-35 255.9 28.7 322 52-407 55-430 (456)
129 2dkj_A Serine hydroxymethyltra 100.0 7.2E-32 2.5E-36 256.5 23.5 336 34-407 22-387 (407)
130 3vax_A Putative uncharacterize 100.0 5E-33 1.7E-37 263.8 15.5 338 33-407 17-399 (400)
131 1zod_A DGD, 2,2-dialkylglycine 100.0 3.7E-32 1.3E-36 260.5 21.5 349 33-408 41-432 (433)
132 1s0a_A Adenosylmethionine-8-am 100.0 1.8E-31 6.3E-36 255.4 25.7 338 33-407 41-423 (429)
133 3nx3_A Acoat, acetylornithine 100.0 2E-31 7E-36 252.3 24.5 334 33-407 34-394 (395)
134 4ffc_A 4-aminobutyrate aminotr 100.0 6.9E-32 2.4E-36 259.5 21.6 355 33-410 62-451 (453)
135 2rfv_A Methionine gamma-lyase; 100.0 2.3E-30 8E-35 245.2 31.8 317 39-403 24-395 (398)
136 3dxv_A Alpha-amino-epsilon-cap 100.0 2.2E-31 7.4E-36 255.6 23.5 347 33-408 41-425 (439)
137 2po3_A 4-dehydrase; external a 100.0 6.8E-30 2.3E-34 244.1 33.1 332 33-409 12-387 (424)
138 2oga_A Transaminase; PLP-depen 100.0 6.6E-31 2.3E-35 249.0 25.7 324 35-407 30-395 (399)
139 4a6r_A Omega transaminase; tra 100.0 7.5E-31 2.6E-35 253.0 26.3 354 33-412 48-453 (459)
140 2bkw_A Alanine-glyoxylate amin 100.0 1.4E-31 4.7E-36 252.6 20.4 329 36-407 5-383 (385)
141 3gju_A Putative aminotransfera 100.0 1.5E-30 5.2E-35 250.9 27.3 356 32-410 48-458 (460)
142 1z7d_A Ornithine aminotransfer 100.0 5.8E-31 2E-35 251.7 24.1 334 32-409 62-430 (433)
143 3a9z_A Selenocysteine lyase; P 100.0 6.9E-31 2.4E-35 251.7 24.5 333 35-409 17-429 (432)
144 3n5m_A Adenosylmethionine-8-am 100.0 1.2E-30 4.1E-35 251.3 25.6 350 33-406 47-450 (452)
145 1w23_A Phosphoserine aminotran 100.0 1.5E-31 5.2E-36 250.0 18.7 323 36-407 3-359 (360)
146 2oat_A Ornithine aminotransfer 100.0 6.7E-30 2.3E-34 244.7 29.9 332 32-407 73-438 (439)
147 3l44_A Glutamate-1-semialdehyd 100.0 8.9E-31 3E-35 251.0 23.1 344 33-410 53-432 (434)
148 1ax4_A Tryptophanase; tryptoph 100.0 9.2E-31 3.1E-35 253.3 23.2 330 55-408 55-441 (467)
149 3lws_A Aromatic amino acid bet 100.0 3.8E-31 1.3E-35 247.0 19.0 315 55-405 21-356 (357)
150 3mc6_A Sphingosine-1-phosphate 100.0 8.7E-30 3E-34 248.3 28.8 330 52-409 75-438 (497)
151 3oks_A 4-aminobutyrate transam 100.0 1.1E-30 3.7E-35 251.1 22.0 352 33-407 59-450 (451)
152 3mad_A Sphingosine-1-phosphate 100.0 7.4E-30 2.5E-34 249.6 28.1 309 72-410 130-471 (514)
153 2c0r_A PSAT, phosphoserine ami 100.0 5.1E-31 1.7E-35 246.6 19.1 325 36-408 4-361 (362)
154 3pj0_A LMO0305 protein; struct 100.0 4.5E-31 1.5E-35 246.7 16.7 328 35-404 13-358 (359)
155 1ibj_A CBL, cystathionine beta 100.0 5.5E-30 1.9E-34 245.7 23.9 328 34-407 88-461 (464)
156 2c81_A Glutamine-2-deoxy-scyll 100.0 9.9E-29 3.4E-33 235.6 32.2 319 53-408 14-414 (418)
157 1mdo_A ARNB aminotransferase; 100.0 2.9E-29 9.9E-34 237.4 28.1 323 36-408 9-386 (393)
158 3dod_A Adenosylmethionine-8-am 100.0 6.3E-30 2.2E-34 245.9 23.7 348 33-409 42-444 (448)
159 1qz9_A Kynureninase; kynurenin 100.0 1E-29 3.5E-34 242.3 25.0 319 35-407 27-401 (416)
160 3tfu_A Adenosylmethionine-8-am 100.0 1.7E-30 5.9E-35 249.7 19.5 339 33-408 71-453 (457)
161 3k28_A Glutamate-1-semialdehyd 100.0 3E-30 1E-34 246.9 20.9 342 32-408 50-427 (429)
162 3a8u_X Omega-amino acid--pyruv 100.0 1.6E-29 5.5E-34 243.3 26.1 345 33-407 48-446 (449)
163 3uwc_A Nucleotide-sugar aminot 100.0 2.4E-29 8.1E-34 236.3 26.0 323 34-407 5-370 (374)
164 3i5t_A Aminotransferase; pyrid 100.0 2.5E-29 8.5E-34 242.9 26.3 351 32-412 51-458 (476)
165 3hmu_A Aminotransferase, class 100.0 2.4E-29 8.1E-34 242.6 24.7 352 32-412 52-456 (472)
166 3ndn_A O-succinylhomoserine su 100.0 4.7E-29 1.6E-33 236.2 26.0 286 78-405 82-413 (414)
167 3n0l_A Serine hydroxymethyltra 100.0 2E-29 6.8E-34 240.4 23.6 337 35-407 25-388 (417)
168 2cy8_A D-phgat, D-phenylglycin 100.0 2.4E-29 8.1E-34 242.4 24.2 335 33-410 55-437 (453)
169 1gc0_A Methionine gamma-lyase; 100.0 3.2E-28 1.1E-32 230.4 30.5 280 77-403 65-396 (398)
170 1wyu_B Glycine dehydrogenase s 100.0 4.9E-29 1.7E-33 241.1 24.9 332 36-407 67-440 (474)
171 2epj_A Glutamate-1-semialdehyd 100.0 1.5E-29 5.2E-34 242.4 20.8 336 33-408 54-431 (434)
172 2e7u_A Glutamate-1-semialdehyd 100.0 5.8E-29 2E-33 237.6 24.2 332 33-404 50-423 (424)
173 2fnu_A Aminotransferase; prote 100.0 5.9E-28 2E-32 226.9 30.6 314 51-408 9-372 (375)
174 2dgk_A GAD-beta, GADB, glutama 100.0 6.2E-28 2.1E-32 232.3 31.0 337 52-410 53-436 (452)
175 3fq8_A Glutamate-1-semialdehyd 100.0 4.2E-29 1.4E-33 238.8 20.9 334 33-407 50-426 (427)
176 1rv3_A Serine hydroxymethyltra 100.0 8.9E-29 3E-33 239.4 23.2 346 35-407 44-430 (483)
177 2oqx_A Tryptophanase; lyase, p 100.0 2.2E-29 7.6E-34 243.7 18.4 329 55-408 53-442 (467)
178 1cs1_A CGS, protein (cystathio 100.0 1.4E-27 4.9E-32 225.1 30.3 288 72-408 48-383 (386)
179 4e77_A Glutamate-1-semialdehyd 100.0 5.3E-29 1.8E-33 238.2 20.3 344 32-406 50-427 (429)
180 3frk_A QDTB; aminotransferase, 100.0 7.2E-29 2.5E-33 233.0 20.1 322 36-407 4-367 (373)
181 3dr4_A Putative perosamine syn 100.0 2.5E-28 8.6E-33 230.8 23.6 322 34-405 21-390 (391)
182 3ecd_A Serine hydroxymethyltra 100.0 1.1E-27 3.8E-32 228.8 28.1 335 35-408 32-397 (425)
183 3e9k_A Kynureninase; kynurenin 100.0 8E-29 2.7E-33 239.5 20.2 332 35-408 66-461 (465)
184 3qhx_A Cystathionine gamma-syn 100.0 2.3E-27 8E-32 223.6 29.4 284 77-405 66-391 (392)
185 3acz_A Methionine gamma-lyase; 100.0 4.2E-27 1.4E-31 221.9 30.7 281 77-406 59-387 (389)
186 2cjg_A L-lysine-epsilon aminot 100.0 8.8E-29 3E-33 237.7 18.9 335 33-408 52-448 (449)
187 2cb1_A O-acetyl homoserine sul 100.0 5.1E-27 1.7E-31 223.1 30.8 307 51-402 32-410 (412)
188 3gbx_A Serine hydroxymethyltra 100.0 2.1E-28 7E-33 233.5 20.3 326 53-407 42-395 (420)
189 3nyt_A Aminotransferase WBPE; 100.0 4.7E-28 1.6E-32 226.9 22.3 304 53-404 14-360 (367)
190 1pff_A Methionine gamma-lyase; 100.0 5.3E-27 1.8E-31 216.6 28.6 276 81-403 2-329 (331)
191 1qgn_A Protein (cystathionine 100.0 5E-27 1.7E-31 223.4 29.1 284 78-407 115-444 (445)
192 3h7f_A Serine hydroxymethyltra 100.0 4.8E-28 1.6E-32 232.5 22.3 336 36-407 46-413 (447)
193 3hbx_A GAD 1, glutamate decarb 100.0 4.9E-27 1.7E-31 228.2 29.4 349 34-410 54-446 (502)
194 2fyf_A PSAT, phosphoserine ami 100.0 7E-28 2.4E-32 228.2 22.8 324 35-407 39-397 (398)
195 3ri6_A O-acetylhomoserine sulf 100.0 4.5E-27 1.5E-31 223.1 28.0 294 72-405 78-429 (430)
196 1n8p_A Cystathionine gamma-lya 100.0 2E-27 6.7E-32 224.1 25.3 282 77-403 55-390 (393)
197 3cog_A Cystathionine gamma-lya 100.0 1.3E-26 4.3E-31 219.3 29.6 287 70-408 61-398 (403)
198 1o69_A Aminotransferase; struc 100.0 2E-26 6.9E-31 217.8 28.3 311 54-407 11-386 (394)
199 2vi8_A Serine hydroxymethyltra 100.0 2.2E-27 7.6E-32 225.3 21.8 332 35-408 24-387 (405)
200 3ju7_A Putative PLP-dependent 100.0 1.1E-26 3.8E-31 217.7 24.5 314 50-407 11-374 (377)
201 2okj_A Glutamate decarboxylase 100.0 6.4E-26 2.2E-30 221.1 30.0 328 59-407 111-501 (504)
202 2qma_A Diaminobutyrate-pyruvat 100.0 1.1E-26 3.9E-31 226.0 24.4 334 52-407 111-495 (497)
203 1js3_A DDC;, DOPA decarboxylas 99.9 1.3E-26 4.6E-31 225.0 23.1 333 54-410 87-476 (486)
204 2fq6_A Cystathionine beta-lyas 99.9 7.9E-26 2.7E-30 213.9 27.7 214 77-329 82-303 (415)
205 3ke3_A Putative serine-pyruvat 99.9 4.1E-26 1.4E-30 214.5 24.4 298 81-409 35-377 (379)
206 3vp6_A Glutamate decarboxylase 99.9 3E-25 1E-29 215.9 30.4 332 55-407 110-504 (511)
207 3nmy_A Xometc, cystathionine g 99.9 2.4E-25 8.4E-30 209.7 26.7 288 72-406 63-397 (400)
208 3bb8_A CDP-4-keto-6-deoxy-D-gl 99.9 3.8E-25 1.3E-29 211.9 27.9 311 54-406 42-434 (437)
209 2a7v_A Serine hydroxymethyltra 99.9 5.2E-25 1.8E-29 211.0 26.2 344 36-407 55-440 (490)
210 4e1o_A HDC, histidine decarbox 99.9 4.2E-25 1.5E-29 213.6 24.5 331 54-409 92-479 (481)
211 3k40_A Aromatic-L-amino-acid d 99.9 4.8E-25 1.6E-29 212.7 23.4 337 55-410 88-473 (475)
212 2yky_A Beta-transaminase; tran 99.9 2.2E-28 7.5E-33 233.1 0.0 335 32-410 97-462 (465)
213 2ctz_A O-acetyl-L-homoserine s 99.9 5.9E-24 2E-28 202.3 30.3 287 78-405 59-420 (421)
214 2x3l_A ORN/Lys/Arg decarboxyla 99.9 5.3E-26 1.8E-30 217.8 15.5 289 74-407 54-352 (446)
215 2z67_A O-phosphoseryl-tRNA(SEC 99.9 2.1E-25 7.3E-30 214.5 18.8 299 79-405 131-455 (456)
216 3b8x_A WBDK, pyridoxamine 5-ph 99.9 1.9E-23 6.5E-28 197.2 30.9 307 52-401 12-389 (390)
217 2jis_A Cysteine sulfinic acid 99.9 6.4E-24 2.2E-28 207.3 27.9 314 72-406 139-513 (515)
218 1ohv_A 4-aminobutyrate aminotr 99.9 8.8E-25 3E-29 210.8 21.2 340 32-407 60-470 (472)
219 1wyu_A Glycine dehydrogenase ( 99.9 5.9E-24 2E-28 203.7 23.2 282 80-405 111-437 (438)
220 3jzl_A Putative cystathionine 99.9 1.5E-23 5.2E-28 197.2 23.3 268 55-364 32-336 (409)
221 3hvy_A Cystathionine beta-lyas 99.9 1.7E-23 5.7E-28 197.5 22.5 254 55-346 47-340 (427)
222 3i16_A Aluminum resistance pro 99.9 3.7E-23 1.3E-27 195.2 23.3 267 55-363 46-352 (427)
223 1c4k_A Protein (ornithine deca 99.9 8.4E-23 2.9E-27 204.2 23.7 309 77-409 173-567 (730)
224 3ht4_A Aluminum resistance pro 99.9 7.5E-23 2.6E-27 194.1 20.2 277 54-364 37-342 (431)
225 3e77_A Phosphoserine aminotran 99.9 4E-22 1.4E-26 184.7 23.3 326 51-408 22-375 (377)
226 3qm2_A Phosphoserine aminotran 99.9 2.3E-22 8E-27 187.3 20.7 323 51-408 36-385 (386)
227 3m5u_A Phosphoserine aminotran 99.9 5.7E-22 2E-26 183.0 22.6 324 34-408 3-360 (361)
228 2vyc_A Biodegradative arginine 99.9 1.3E-21 4.3E-26 197.6 25.0 310 78-409 206-606 (755)
229 4ao9_A Beta-phenylalanine amin 99.9 9.4E-20 3.2E-24 172.4 23.3 338 32-410 84-448 (454)
230 3n75_A LDC, lysine decarboxyla 99.8 2.3E-19 7.8E-24 178.0 24.3 305 75-407 193-559 (715)
231 4atq_A 4-aminobutyrate transam 99.8 7.4E-19 2.5E-23 167.1 25.3 350 32-407 61-454 (456)
232 4e3q_A Pyruvate transaminase; 99.8 1.3E-18 4.6E-23 165.9 25.4 353 32-412 64-472 (473)
233 3hl2_A O-phosphoseryl-tRNA(SEC 99.8 3.7E-17 1.3E-21 150.8 22.2 307 87-412 123-465 (501)
234 4a0g_A Adenosylmethionine-8-am 99.8 2.3E-18 7.9E-23 175.0 12.7 344 36-407 381-827 (831)
235 3ou5_A Serine hydroxymethyltra 99.7 2.1E-15 7.3E-20 138.5 26.7 345 36-406 55-439 (490)
236 3bc8_A O-phosphoseryl-tRNA(SEC 99.7 5.4E-16 1.8E-20 145.2 20.6 318 79-413 96-448 (450)
237 2yvq_A Carbamoyl-phosphate syn 77.2 21 0.00073 27.2 9.5 109 97-212 21-131 (143)
238 1ofu_X SULA, hypothetical prot 71.8 25 0.00085 25.9 8.2 102 102-208 6-112 (119)
239 1oft_A SULA, hypothetical prot 71.2 35 0.0012 26.6 9.4 102 101-208 47-154 (161)
240 4fgs_A Probable dehydrogenase 58.7 41 0.0014 28.9 8.3 96 102-202 30-134 (273)
241 3gh5_A HEX1, beta-hexosaminida 54.7 64 0.0022 30.7 9.6 111 96-210 126-273 (525)
242 3rwb_A TPLDH, pyridoxal 4-dehy 49.4 85 0.0029 26.0 8.9 95 100-200 6-109 (247)
243 4hp8_A 2-deoxy-D-gluconate 3-d 49.1 77 0.0026 26.7 8.3 96 102-202 10-110 (247)
244 1bqc_A Protein (beta-mannanase 47.9 44 0.0015 28.9 7.0 22 192-213 64-85 (302)
245 3mwd_B ATP-citrate synthase; A 47.8 37 0.0013 30.2 6.3 77 131-217 64-142 (334)
246 2yv2_A Succinyl-COA synthetase 47.6 24 0.00082 30.8 5.1 76 132-217 57-133 (297)
247 4dqx_A Probable oxidoreductase 46.1 89 0.0031 26.5 8.6 96 99-200 26-130 (277)
248 1oi7_A Succinyl-COA synthetase 46.0 19 0.00067 31.2 4.2 77 132-218 51-127 (288)
249 2fp4_A Succinyl-COA ligase [GD 45.6 17 0.00057 31.9 3.8 77 133-219 59-136 (305)
250 3m1a_A Putative dehydrogenase; 45.3 98 0.0033 26.2 8.8 64 102-170 7-70 (281)
251 2gjx_A Beta-hexosaminidase alp 45.3 2E+02 0.0068 27.2 11.3 27 185-211 207-233 (507)
252 2nu8_A Succinyl-COA ligase [AD 44.7 23 0.00077 30.8 4.5 75 133-217 52-126 (288)
253 3tpc_A Short chain alcohol deh 43.9 1E+02 0.0034 25.7 8.5 66 100-170 7-72 (257)
254 3rd5_A Mypaa.01249.C; ssgcid, 43.4 55 0.0019 28.1 6.8 68 99-171 15-82 (291)
255 4e6p_A Probable sorbitol dehyd 42.8 1E+02 0.0035 25.7 8.4 66 100-170 8-73 (259)
256 2yv1_A Succinyl-COA ligase [AD 42.8 17 0.00059 31.7 3.4 76 132-217 57-132 (294)
257 3grp_A 3-oxoacyl-(acyl carrier 40.7 86 0.003 26.4 7.6 67 99-170 26-92 (266)
258 1now_A Beta-hexosaminidase bet 40.2 2.4E+02 0.0083 26.6 11.1 24 187-210 214-237 (507)
259 3ppi_A 3-hydroxyacyl-COA dehyd 40.0 97 0.0033 26.2 7.9 54 101-154 31-84 (281)
260 3ruf_A WBGU; rossmann fold, UD 39.8 1.8E+02 0.0062 25.3 10.0 101 99-207 24-143 (351)
261 4eso_A Putative oxidoreductase 39.7 1.2E+02 0.0041 25.3 8.3 97 100-201 8-112 (255)
262 4gkb_A 3-oxoacyl-[acyl-carrier 39.3 1.7E+02 0.0059 24.6 9.2 95 102-201 8-112 (258)
263 3gvc_A Oxidoreductase, probabl 38.7 95 0.0033 26.4 7.6 65 101-170 30-94 (277)
264 2gjh_A Designed protein; oblig 38.5 59 0.002 19.2 4.0 27 382-408 3-30 (62)
265 2e8y_A AMYX protein, pullulana 38.5 17 0.00057 36.4 2.9 28 192-219 315-342 (718)
266 1c7s_A Beta-N-acetylhexosamini 38.1 70 0.0024 32.5 7.2 26 185-210 392-417 (858)
267 3rjz_A N-type ATP pyrophosphat 38.0 1.8E+02 0.006 24.3 9.8 99 101-209 6-119 (237)
268 3tzq_B Short-chain type dehydr 37.7 1.8E+02 0.0062 24.4 9.2 66 100-170 11-76 (271)
269 3guy_A Short-chain dehydrogena 37.4 78 0.0027 25.8 6.7 93 102-200 3-101 (230)
270 3pxx_A Carveol dehydrogenase; 36.9 97 0.0033 26.3 7.4 96 100-201 10-127 (287)
271 3zu3_A Putative reductase YPO4 36.7 2.5E+02 0.0084 25.6 10.3 54 76-130 23-78 (405)
272 2o23_A HADH2 protein; HSD17B10 36.2 1.8E+02 0.0063 24.0 9.8 66 100-170 12-77 (265)
273 2q5c_A NTRC family transcripti 36.0 1.2E+02 0.0042 24.3 7.3 11 102-112 53-63 (196)
274 1wzu_A Quinolinate synthetase 36.0 45 0.0016 29.0 4.9 100 102-210 121-228 (300)
275 4g81_D Putative hexonate dehyd 35.8 1.8E+02 0.006 24.5 8.6 98 99-201 8-116 (255)
276 3n74_A 3-ketoacyl-(acyl-carrie 35.7 1E+02 0.0036 25.6 7.3 66 100-170 9-74 (261)
277 3dqp_A Oxidoreductase YLBE; al 35.3 1.7E+02 0.0058 23.4 9.2 92 103-205 3-96 (219)
278 2epl_X N-acetyl-beta-D-glucosa 35.1 2E+02 0.0069 28.0 9.8 102 98-211 43-163 (627)
279 3e2i_A Thymidine kinase; Zn-bi 33.8 1.3E+02 0.0043 24.8 7.0 102 110-227 43-147 (219)
280 3op4_A 3-oxoacyl-[acyl-carrier 33.8 1.4E+02 0.0049 24.6 7.8 66 100-170 9-74 (248)
281 3tsm_A IGPS, indole-3-glycerol 33.8 1.5E+02 0.005 25.4 7.7 50 158-213 127-176 (272)
282 2ya0_A Putative alkaline amylo 33.5 26 0.00089 35.0 3.4 28 192-219 254-281 (714)
283 2yl5_A Beta-N-acetylhexosamini 33.4 33 0.0011 31.9 3.8 27 184-210 86-112 (442)
284 3pff_A ATP-citrate synthase; p 33.2 70 0.0024 32.3 6.3 78 131-218 550-629 (829)
285 4gqr_A Pancreatic alpha-amylas 33.1 27 0.00094 32.6 3.4 31 186-219 73-103 (496)
286 3lkv_A Uncharacterized conserv 32.9 2E+02 0.007 24.6 8.9 145 55-214 23-177 (302)
287 3l6e_A Oxidoreductase, short-c 31.9 1.4E+02 0.0047 24.5 7.3 64 102-170 5-68 (235)
288 1jak_A Beta-N-acetylhexosamini 31.8 73 0.0025 30.2 6.0 25 187-211 225-249 (512)
289 3si9_A DHDPS, dihydrodipicolin 31.3 2.3E+02 0.0077 24.7 8.8 54 80-136 74-130 (315)
290 2pju_A Propionate catabolism o 31.1 2.2E+02 0.0076 23.4 8.3 15 193-207 141-155 (225)
291 3av3_A Phosphoribosylglycinami 31.0 94 0.0032 25.4 5.9 88 104-196 8-101 (212)
292 1hdc_A 3-alpha, 20 beta-hydrox 30.5 2.2E+02 0.0075 23.5 8.5 65 101-170 6-70 (254)
293 3qfe_A Putative dihydrodipicol 30.4 2.7E+02 0.0091 24.3 9.1 53 80-135 63-118 (318)
294 3gem_A Short chain dehydrogena 30.4 1.6E+02 0.0055 24.6 7.6 52 99-150 26-77 (260)
295 4fn4_A Short chain dehydrogena 30.2 1.7E+02 0.0057 24.7 7.5 95 102-201 8-115 (254)
296 3auf_A Glycinamide ribonucleot 29.6 1.1E+02 0.0037 25.4 6.0 89 103-196 26-120 (229)
297 1hxh_A 3BETA/17BETA-hydroxyste 29.4 2.4E+02 0.0082 23.2 8.7 65 101-170 7-71 (253)
298 4ibo_A Gluconate dehydrogenase 29.4 2.3E+02 0.0079 23.8 8.5 67 99-170 25-94 (271)
299 3s5o_A 4-hydroxy-2-oxoglutarat 29.2 2.8E+02 0.0096 24.0 9.4 52 80-135 66-121 (307)
300 3bzy_B ESCU; auto cleavage pro 29.2 32 0.0011 23.4 2.2 25 193-217 27-51 (83)
301 2yl6_A Beta-N-acetylhexosamini 29.1 32 0.0011 31.8 3.0 26 185-210 84-109 (434)
302 3bk2_A RNAse J, metal dependen 29.1 1.3E+02 0.0044 28.9 7.4 78 122-207 337-423 (562)
303 3h7a_A Short chain dehydrogena 28.6 2.5E+02 0.0085 23.2 10.0 96 100-200 7-112 (252)
304 3ecs_A Translation initiation 28.3 3E+02 0.01 24.0 10.0 98 98-212 119-229 (315)
305 1ht6_A AMY1, alpha-amylase iso 28.2 45 0.0015 30.5 3.8 28 192-219 68-95 (405)
306 4dzz_A Plasmid partitioning pr 28.2 1.9E+02 0.0063 22.7 7.4 49 108-156 60-108 (206)
307 2ya1_A Putative alkaline amylo 28.0 36 0.0012 35.5 3.4 28 192-219 561-588 (1014)
308 1i4n_A Indole-3-glycerol phosp 27.9 73 0.0025 26.9 4.8 50 159-214 109-158 (251)
309 1b93_A Protein (methylglyoxal 27.8 94 0.0032 23.9 4.9 66 144-214 56-121 (152)
310 1g94_A Alpha-amylase; beta-alp 27.7 36 0.0012 31.6 3.2 28 192-219 64-91 (448)
311 3i6i_A Putative leucoanthocyan 27.6 2.1E+02 0.0073 24.9 8.3 97 101-211 11-116 (346)
312 3o1l_A Formyltetrahydrofolate 27.6 1.2E+02 0.0039 26.5 6.1 114 78-197 78-201 (302)
313 1lwj_A 4-alpha-glucanotransfer 27.4 46 0.0016 30.8 3.8 28 192-219 69-96 (441)
314 2j9r_A Thymidine kinase; TK1, 27.3 1.8E+02 0.0063 23.7 7.0 103 109-227 42-147 (214)
315 4dmm_A 3-oxoacyl-[acyl-carrier 27.1 1.8E+02 0.0063 24.3 7.4 97 99-201 27-136 (269)
316 3uve_A Carveol dehydrogenase ( 27.0 1.9E+02 0.0064 24.5 7.5 32 99-130 10-41 (286)
317 3f9i_A 3-oxoacyl-[acyl-carrier 26.9 1.5E+02 0.0052 24.3 6.8 68 99-171 13-80 (249)
318 2ew8_A (S)-1-phenylethanol deh 26.9 2.6E+02 0.009 22.9 9.7 65 101-170 8-73 (249)
319 3tsc_A Putative oxidoreductase 26.6 2E+02 0.007 24.1 7.7 31 100-130 11-41 (277)
320 1mxg_A Alpha amylase; hyperthe 26.6 49 0.0017 30.6 3.8 28 192-219 86-113 (435)
321 1wjw_A Phosphoacetylglucosamin 26.3 1.8E+02 0.006 20.9 6.0 39 368-409 58-97 (112)
322 3qlj_A Short chain dehydrogena 26.2 2.7E+02 0.0094 24.0 8.6 96 101-201 28-144 (322)
323 3lyl_A 3-oxoacyl-(acyl-carrier 26.2 2.7E+02 0.0091 22.7 8.3 65 101-170 6-73 (247)
324 2al1_A Enolase 1, 2-phospho-D- 26.2 55 0.0019 30.3 4.0 92 110-211 276-371 (436)
325 3n0v_A Formyltetrahydrofolate 26.1 1E+02 0.0035 26.6 5.5 114 78-197 63-186 (286)
326 3ged_A Short-chain dehydrogena 25.9 2.6E+02 0.0089 23.3 7.9 94 102-201 4-105 (247)
327 3sx2_A Putative 3-ketoacyl-(ac 25.8 1.7E+02 0.0059 24.5 7.1 32 100-131 13-44 (278)
328 1vl8_A Gluconate 5-dehydrogena 25.7 2.9E+02 0.0099 23.0 8.9 66 100-170 21-90 (267)
329 2guy_A Alpha-amylase A; (beta- 25.6 51 0.0018 30.8 3.8 28 192-219 97-124 (478)
330 1wza_A Alpha-amylase A; hydrol 25.6 55 0.0019 30.7 4.1 28 192-219 81-108 (488)
331 1gcy_A Glucan 1,4-alpha-maltot 25.4 60 0.0021 30.9 4.3 29 192-220 92-120 (527)
332 1hvx_A Alpha-amylase; hydrolas 25.4 45 0.0015 31.6 3.4 28 192-219 81-108 (515)
333 3gaf_A 7-alpha-hydroxysteroid 25.2 2.7E+02 0.0091 23.0 8.1 96 99-200 11-117 (256)
334 3daq_A DHDPS, dihydrodipicolin 25.1 1.9E+02 0.0064 24.9 7.1 54 80-136 54-110 (292)
335 1iuk_A Hypothetical protein TT 25.1 71 0.0024 24.0 3.9 21 196-216 107-127 (140)
336 2dh2_A 4F2 cell-surface antige 25.1 59 0.002 29.9 4.0 28 192-219 81-108 (424)
337 2kfp_A Pspto_3016 protein; alp 25.1 85 0.0029 23.1 4.2 39 360-400 71-111 (125)
338 4aie_A Glucan 1,6-alpha-glucos 25.1 49 0.0017 31.5 3.6 27 192-218 79-105 (549)
339 3l5o_A Uncharacterized protein 25.0 97 0.0033 26.5 5.0 73 123-205 140-212 (270)
340 3tfo_A Putative 3-oxoacyl-(acy 25.0 3E+02 0.01 22.9 8.7 64 102-170 5-72 (264)
341 1ud2_A Amylase, alpha-amylase; 25.0 47 0.0016 31.1 3.4 28 192-219 80-107 (480)
342 3bh4_A Alpha-amylase; calcium, 25.0 47 0.0016 31.2 3.4 28 192-219 78-105 (483)
343 3is3_A 17BETA-hydroxysteroid d 24.9 2.1E+02 0.007 24.0 7.3 95 101-200 19-125 (270)
344 1uls_A Putative 3-oxoacyl-acyl 24.8 2.9E+02 0.0098 22.6 8.6 31 101-131 6-36 (245)
345 2d59_A Hypothetical protein PH 24.8 1E+02 0.0035 23.2 4.8 21 196-216 114-134 (144)
346 2z1k_A (NEO)pullulanase; hydro 24.8 55 0.0019 30.6 3.8 28 192-219 96-123 (475)
347 4iin_A 3-ketoacyl-acyl carrier 24.6 2.8E+02 0.0096 23.1 8.2 68 98-170 27-98 (271)
348 3tjr_A Short chain dehydrogena 24.6 3.1E+02 0.011 23.3 8.6 95 100-200 31-137 (301)
349 3pgx_A Carveol dehydrogenase; 24.5 2.3E+02 0.0078 23.8 7.6 32 100-131 15-46 (280)
350 2aaa_A Alpha-amylase; glycosid 24.5 64 0.0022 30.2 4.3 29 192-220 97-125 (484)
351 3kvo_A Hydroxysteroid dehydrog 24.5 3.6E+02 0.012 23.7 9.7 65 101-170 46-120 (346)
352 3dhn_A NAD-dependent epimerase 24.5 2.7E+02 0.0092 22.2 8.0 70 101-180 5-74 (227)
353 3qtp_A Enolase 1; glycolysis, 24.4 2E+02 0.0068 26.5 7.2 94 109-212 281-379 (441)
354 1wzl_A Alpha-amylase II; pullu 24.3 55 0.0019 31.6 3.8 29 191-219 218-246 (585)
355 3na8_A Putative dihydrodipicol 24.2 2.8E+02 0.0096 24.1 8.1 54 80-136 76-132 (315)
356 4dyv_A Short-chain dehydrogena 24.2 2.4E+02 0.0084 23.6 7.7 64 102-170 29-93 (272)
357 1ua7_A Alpha-amylase; beta-alp 24.2 58 0.002 29.9 3.8 29 192-220 74-102 (422)
358 3ak4_A NADH-dependent quinucli 24.1 3E+02 0.01 22.7 8.8 32 100-131 12-43 (263)
359 1wpc_A Glucan 1,4-alpha-maltoh 24.1 50 0.0017 31.0 3.4 28 192-219 82-109 (485)
360 4fc7_A Peroxisomal 2,4-dienoyl 24.0 3.2E+02 0.011 22.9 9.2 94 101-200 28-134 (277)
361 3faw_A Reticulocyte binding pr 23.8 49 0.0017 33.8 3.4 28 192-219 369-396 (877)
362 1ea9_C Cyclomaltodextrinase; h 23.8 86 0.003 30.2 5.1 29 191-219 217-245 (583)
363 1vb5_A Translation initiation 23.7 3.4E+02 0.012 23.1 9.1 117 80-211 93-216 (276)
364 2vt1_B Surface presentation of 23.6 45 0.0016 23.2 2.2 24 193-216 27-50 (93)
365 1j0h_A Neopullulanase; beta-al 23.3 59 0.002 31.4 3.8 29 191-219 221-249 (588)
366 3rkr_A Short chain oxidoreduct 23.3 3.2E+02 0.011 22.6 8.6 65 101-170 30-97 (262)
367 3v2g_A 3-oxoacyl-[acyl-carrier 23.3 2.7E+02 0.0093 23.3 7.8 99 98-201 29-139 (271)
368 2wsb_A Galactitol dehydrogenas 23.3 3E+02 0.01 22.4 8.2 67 99-170 10-77 (254)
369 2a4k_A 3-oxoacyl-[acyl carrier 23.0 3.1E+02 0.011 22.8 8.1 65 101-170 7-71 (263)
370 1nff_A Putative oxidoreductase 23.0 3.2E+02 0.011 22.6 8.7 31 101-131 8-38 (260)
371 3dmy_A Protein FDRA; predicted 22.9 73 0.0025 29.9 4.2 74 130-214 20-94 (480)
372 1jae_A Alpha-amylase; glycosid 22.8 53 0.0018 30.7 3.3 29 192-220 74-102 (471)
373 3sju_A Keto reductase; short-c 22.6 3.2E+02 0.011 22.9 8.2 65 101-170 25-92 (279)
374 3lou_A Formyltetrahydrofolate 22.5 1.1E+02 0.0038 26.4 5.0 114 78-197 68-191 (292)
375 1x1t_A D(-)-3-hydroxybutyrate 22.5 3.3E+02 0.011 22.4 9.0 64 102-170 6-74 (260)
376 4b79_A PA4098, probable short- 22.4 2.5E+02 0.0087 23.3 7.1 92 102-201 12-106 (242)
377 3t7c_A Carveol dehydrogenase; 22.4 3.6E+02 0.012 22.9 9.3 33 99-131 27-59 (299)
378 3e96_A Dihydrodipicolinate syn 22.2 1.7E+02 0.0057 25.6 6.2 53 158-211 27-86 (316)
379 4a29_A Engineered retro-aldol 22.1 2.1E+02 0.0072 24.1 6.4 78 126-211 81-158 (258)
380 3ksu_A 3-oxoacyl-acyl carrier 22.0 3.4E+02 0.012 22.5 9.1 97 99-200 10-120 (262)
381 3l77_A Short-chain alcohol deh 22.0 3.1E+02 0.011 22.0 9.4 94 102-201 4-110 (235)
382 3t7y_A YOP proteins translocat 21.7 44 0.0015 23.5 1.8 24 193-216 42-65 (97)
383 3uuw_A Putative oxidoreductase 21.6 2.2E+02 0.0074 24.5 6.9 72 134-217 57-128 (308)
384 2cfc_A 2-(R)-hydroxypropyl-COM 21.5 2.9E+02 0.0098 22.5 7.5 64 102-170 4-71 (250)
385 3l21_A DHDPS, dihydrodipicolin 21.4 1.8E+02 0.006 25.3 6.2 54 157-211 29-89 (304)
386 1yht_A DSPB; beta barrel, hydr 21.4 63 0.0021 29.1 3.3 68 139-210 40-112 (367)
387 3m5v_A DHDPS, dihydrodipicolin 21.3 3.7E+02 0.013 23.1 8.3 54 80-136 59-116 (301)
388 3nyw_A Putative oxidoreductase 21.3 2.6E+02 0.0089 23.0 7.2 33 101-133 8-40 (250)
389 1geg_A Acetoin reductase; SDR 21.2 3.4E+02 0.012 22.2 8.0 63 103-170 5-70 (256)
390 2plg_A TLL0839 protein; hypoth 21.2 1.4E+02 0.0048 23.2 4.8 57 355-412 87-149 (163)
391 2wc7_A Alpha amylase, catalyti 21.2 56 0.0019 30.7 3.1 27 193-219 103-129 (488)
392 1zja_A Trehalulose synthase; s 21.0 71 0.0024 30.6 3.8 28 192-219 79-106 (557)
393 1vhx_A Putative holliday junct 21.0 1.8E+02 0.0063 22.1 5.5 58 160-217 41-102 (150)
394 3osu_A 3-oxoacyl-[acyl-carrier 21.0 2.8E+02 0.0097 22.6 7.3 64 102-170 6-73 (246)
395 3c01_E Surface presentation of 20.9 47 0.0016 23.4 1.8 24 193-216 27-50 (98)
396 1meo_A Phosophoribosylglycinam 20.9 1.7E+02 0.0057 23.8 5.5 87 104-195 5-97 (209)
397 2wkj_A N-acetylneuraminate lya 20.9 1.5E+02 0.0052 25.7 5.6 54 157-211 25-85 (303)
398 3qze_A DHDPS, dihydrodipicolin 20.9 4.1E+02 0.014 23.0 9.2 54 80-136 75-131 (314)
399 1m53_A Isomaltulose synthase; 20.8 71 0.0024 30.7 3.8 28 192-219 92-119 (570)
400 3dhu_A Alpha-amylase; structur 20.8 64 0.0022 29.9 3.4 29 191-219 82-110 (449)
401 3e48_A Putative nucleoside-dip 20.8 2.9E+02 0.01 23.1 7.6 43 162-207 55-98 (289)
402 1pq4_A Periplasmic binding pro 20.7 1.8E+02 0.0062 25.0 6.1 57 123-185 189-248 (291)
403 4aef_A Neopullulanase (alpha-a 20.7 66 0.0023 31.5 3.6 28 191-218 284-311 (645)
404 2pcq_A Putative dihydrodipicol 20.7 49 0.0017 28.5 2.4 51 158-210 13-66 (283)
405 3rcn_A Beta-N-acetylhexosamini 20.7 70 0.0024 30.6 3.6 113 97-210 83-241 (543)
406 2whl_A Beta-mannanase, baman5; 20.7 68 0.0023 27.6 3.3 23 191-213 62-84 (294)
407 2rhc_B Actinorhodin polyketide 20.6 3.7E+02 0.013 22.4 8.4 65 101-170 23-90 (277)
408 2nuw_A 2-keto-3-deoxygluconate 20.5 4E+02 0.014 22.7 8.6 51 80-136 51-104 (288)
409 2jah_A Clavulanic acid dehydro 20.5 3.5E+02 0.012 22.1 8.6 65 101-170 8-75 (247)
410 2v9d_A YAGE; dihydrodipicolini 20.5 3.6E+02 0.012 23.7 8.1 53 80-135 83-138 (343)
411 3flu_A DHDPS, dihydrodipicolin 20.4 4.1E+02 0.014 22.8 9.3 54 80-136 59-115 (297)
412 3r1i_A Short-chain type dehydr 20.4 3.8E+02 0.013 22.4 9.3 67 99-170 31-100 (276)
413 1oaa_A Sepiapterin reductase; 20.4 2.8E+02 0.0097 22.8 7.3 53 102-154 8-68 (259)
414 3mfq_A TROA, high-affinity zin 20.3 84 0.0029 27.0 3.8 76 125-210 164-242 (282)
415 1x92_A APC5045, phosphoheptose 20.3 3.2E+02 0.011 21.4 12.7 39 165-210 106-144 (199)
416 1qys_A TOP7; alpha-beta, novel 20.1 1.5E+02 0.005 19.5 3.9 28 381-408 46-74 (106)
417 1pjq_A CYSG, siroheme synthase 20.1 5.1E+02 0.018 23.8 9.6 96 98-215 10-107 (457)
No 1
>3dyd_A Tyrosine aminotransferase; PLP, SGC, structural genomics, structural genomics consortium, disease mutation, phenylalani catabolism; HET: PLP; 2.30A {Homo sapiens} PDB: 3pdx_A*
Probab=100.00 E-value=7.7e-53 Score=403.27 Aligned_cols=388 Identities=39% Similarity=0.730 Sum_probs=326.8
Q ss_pred hHHHHHHHhhhcccccccCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCC
Q 014936 16 TIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLP 95 (415)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~ 95 (415)
+++.+...+..+. ..++++|+|+.|+|+....+++++.+++++.+.+.......|++..|..++|+++++++.+. +
T Consensus 38 ~i~~~~~~~~~~~---~~~~~~i~l~~g~~~~~g~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~la~~~~~~-~ 113 (427)
T 3dyd_A 38 PIRAIVDNMKVKP---NPNKTMISLSIGDPTVFGNLPTDPEVTQAMKDALDSGKYNGYAPSIGFLSSREEIASYYHCP-E 113 (427)
T ss_dssp ---------CCCC---CTTSCCEECCCSCTTTTSSSCCCHHHHHHHHHHHHHCCSSSCCCTTCCHHHHHHHHHHHCBT-T
T ss_pred hHHHHHHHHhhcc---cCCCCEEeCCCcCCCccCCCCCCHHHHHHHHHHHhcCcCCCCCCCCCcHHHHHHHHHHHhhc-C
Confidence 4666655444333 34678999999998754457889999999999988765668988889999999999999765 6
Q ss_pred CCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCce
Q 014936 96 YKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTV 175 (415)
Q Consensus 96 ~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 175 (415)
..+++++|++|+|+++++.+++.++.++||+|+++.|+|..+...++..|.++..++.++++++.+|++.+++.++++++
T Consensus 114 ~~~~~~~v~~t~g~t~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~ 193 (427)
T 3dyd_A 114 APLEAKDVILTSGCSQAIDLCLAVLANPGQNILVPRPGFSLYKTLAESMGIEVKLYNLLPEKSWEIDLKQLEYLIDEKTA 193 (427)
T ss_dssp BCCCGGGEEEESSHHHHHHHHHHHHCCTTCEEEEEESCCTHHHHHHHHTTCEEEEEEEEGGGTTEECHHHHHSSCCTTEE
T ss_pred CCCChHHEEEecCcHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEEecccccCCCCCHHHHHHHhccCCC
Confidence 66789999999999999999999999999999999999999999999999999999987767788999999999988899
Q ss_pred EEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEE
Q 014936 176 ALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLG 255 (415)
Q Consensus 176 ~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G 255 (415)
++++++|+||||.+++.+++++|+++|+++|+++|+||+|+++.+++....++..+..+.++++++|+||.|+++|+|+|
T Consensus 194 ~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~~i~Deay~~~~~~g~~~~~~~~~~~~~~vi~~~S~sK~~~~~G~riG 273 (427)
T 3dyd_A 194 CLIVNNPSNPCGSVFSKRHLQKILAVAARQCVPILADEIYGDMVFSDCKYEPLATLSTDVPILSCGGLAKRWLVPGWRLG 273 (427)
T ss_dssp EEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCCEEEECTTTTCBCSSCCCCCGGGGCSSCCEEEEEESTTTSSCGGGCCE
T ss_pred EEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEcCchhhccCCCcCccHHHhCCCCcEEEEeeccccCCCcCcceE
Confidence 99999999999999999999999999999999999999999999887766677777777778999999999999999999
Q ss_pred EEEeeCCCCCCChHHHHHHHHhhccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCC
Q 014936 256 WFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKP 335 (415)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p 335 (415)
|++++++.... .+++.+.+......+++++++.|.++.++|+....+++++.+++++++++.+.+.|+++|++. +..|
T Consensus 274 ~~~~~~~~~~~-~~~i~~~l~~~~~~~~~~~~~~~~a~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~-~~~p 351 (427)
T 3dyd_A 274 WILIHDRRDIF-GNEIRDGLVKLSQRILGPCTIVQGALKSILCRTPGEFYHNTLSFLKSNADLCYGALAAIPGLR-PVRP 351 (427)
T ss_dssp EEEEECSTTSS-HHHHHHHHHHHHHHHCCSCHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHSTTEE-EECC
T ss_pred EEEecCcchhh-HHHHHHHHHHHHhccCCCCHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHhcCCCce-ecCC
Confidence 99997642221 124666666554335788999999999999854568889999999999999999999988887 4479
Q ss_pred CCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEeeCChhhHHHHHHHHHHHHHHHH
Q 014936 336 EGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFAVDPYSLEECLDRIKSFYQRHA 409 (415)
Q Consensus 336 ~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~~~l~~~l~~l~~~~~~~~ 409 (415)
.+|+|+|++++....++..+..+++..+++++||.+.||..|+.++++||+++.+++++++++++|.++++++.
T Consensus 352 ~~g~~~~~~l~~~~~~~~~~~~~~~~~l~~~~gV~v~~g~~~~~~~~iRis~~~~~e~i~~~l~~l~~~l~~~~ 425 (427)
T 3dyd_A 352 SGAMYLMVGIEMEHFPEFENDVEFTERLVAEQSVHCLPATCFEYPNFIRVVITVPEVMMLEACSRIQEFCEQHY 425 (427)
T ss_dssp SBTTEEEEEECGGGCTTCSSHHHHHHHHHHHHCEECEEGGGGTCTTEEEEESCSCHHHHHHHHHHHHHHHHHHC
T ss_pred CeeEEEEEecCHhhcCCCCCHHHHHHHHHHHCCEEEECCcccCCCCeEEEEECCCHHHHHHHHHHHHHHHHHhh
Confidence 99999999887543333335678888888788999999999988899999999999999999999999987653
No 2
>1b5p_A Protein (aspartate aminotransferase); pyridoxal enzyme; HET: PLP; 1.80A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1gck_A* 1b5o_A* 5bj4_A* 1gc4_A* 1gc3_A* 1bkg_A* 5bj3_A* 1bjw_A*
Probab=100.00 E-value=2e-52 Score=395.20 Aligned_cols=379 Identities=24% Similarity=0.394 Sum_probs=316.3
Q ss_pred Cc-cccCCccCCcchhhHHHHHHHhhhcccccccCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCc
Q 014936 1 ME-ISNGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGL 79 (415)
Q Consensus 1 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~ 79 (415)
|+ ++++....+++ .+..+.....+.. ..++++++|+.|+|+ +++++.+.+++.+.+... ...|++..|.
T Consensus 1 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~---~~~~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~~-~~~y~~~~g~ 70 (385)
T 1b5p_A 1 MRGLSRRVQAMKPS--ATVAVNAKALELR---RQGVDLVALTAGEPD----FDTPEHVKEAARRALAQG-KTKYAPPAGI 70 (385)
T ss_dssp CCCCCHHHHHCCCC--HHHHHHHHHHHHH---HTTCCCEECCCSSCS----SCCCHHHHHHHHHHHHTT-CCSCCCTTCC
T ss_pred CchhhhHHhhcCcc--hHHHHHHHHHHHH---hcCCCEEEecCCCCC----CCCCHHHHHHHHHHHhcC-CCCCCCCCCC
Confidence 44 56666666676 4555444333322 235678999999874 556789999998887654 3479888899
Q ss_pred HHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCC
Q 014936 80 PLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGW 159 (415)
Q Consensus 80 ~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~ 159 (415)
+++|+++++++++.+|..+++++|++|+|+++++.+++.+++++||+|+++.|+|..+...++..|.+++.+++++++++
T Consensus 71 ~~lr~~ia~~~~~~~g~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~ 150 (385)
T 1b5p_A 71 PELREALAEKFRRENGLSVTPEETIVTVGGSQALFNLFQAILDPGDEVIVLSPYWVSYPEMVRFAGGVVVEVETLPEEGF 150 (385)
T ss_dssp HHHHHHHHHHHHHTTCCCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTHHHHHHHHTTCEEEEEECCGGGTT
T ss_pred HHHHHHHHHHHHHHhCCCCChHHEEEcCChHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEeecCcccCC
Confidence 99999999999988888888999999999999999999999999999999999999999999999999999998765567
Q ss_pred CCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEE
Q 014936 160 EVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILT 239 (415)
Q Consensus 160 ~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~ 239 (415)
.+|+++++++++++++++++++||||||.++|.+++++|+++|+++|+++|+||+|+.+.+++ ...++..+.. +++++
T Consensus 151 ~~d~~~l~~~l~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~-~~~~~~~~~~-~~~i~ 228 (385)
T 1b5p_A 151 VPDPERVRRAITPRTKALVVNSPNNPTGAVYPKEVLEALARLAVEHDFYLVSDEIYEHLLYEG-EHFSPGRVAP-EHTLT 228 (385)
T ss_dssp CCCHHHHHTTCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBSSS-CCCCGGGTCT-TTEEE
T ss_pred CCCHHHHHHhcCCCCEEEEEeCCCCCCCCCcCHHHHHHHHHHHHHcCCEEEEEccchhcccCC-CCCCHHHcCC-CCEEE
Confidence 899999999998889999999999999999999999999999999999999999999988876 4445555544 68999
Q ss_pred EccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhhcc-ccCCchhHHHHHHHHhhCCC--cHHHHHHHHHHHHHHH
Q 014936 240 LGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFD-ILGDPATFIQAAVPSILQQP--DEVFFKKTLNLLKQSV 316 (415)
Q Consensus 240 ~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~a~~~~l~~~--~~~~~~~~~~~~~~~~ 316 (415)
++||||.|+++|+|+||+++++ ++++.+..... .+.+++.+.|.++.++|+.. ..+++++.++++++++
T Consensus 229 ~~s~SK~~~~~G~RiG~~~~~~--------~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~ 300 (385)
T 1b5p_A 229 VNGAAKAFAMTGWRIGYACGPK--------EVIKAMASVSRQSTTSPDTIAQWATLEALTNQEASRAFVEMAREAYRRRR 300 (385)
T ss_dssp EEESTTTTTCGGGCCEEEECCH--------HHHHHHHHHHHTTTCSCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH
T ss_pred EEechhhcCCcccceEEEEeCH--------HHHHHHHHHHhhccCCCCHHHHHHHHHHHhCCCcchHHHHHHHHHHHHHH
Confidence 9999999999999999999864 67777766533 34577888999988888641 2467888999999999
Q ss_pred HHHHHHhhcCCCCcCCCCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEeeCChhhHHH
Q 014936 317 DICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFAVDPYSLEE 396 (415)
Q Consensus 317 ~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~~~l~~ 396 (415)
+.+.+.|+++ ++. +..|.+++|+|+.++.. + .+..++...++ ++||.+.||..|+.++++|||++.+++++++
T Consensus 301 ~~l~~~L~~~-g~~-~~~~~~~~~~~~~~~~~---~-~~~~~l~~~l~-~~gv~v~~g~~f~~~~~iRis~~~~~~~i~~ 373 (385)
T 1b5p_A 301 DLLLEGLTAL-GLK-AVRPSGAFYVLMDTSPI---A-PDEVRAAERLL-EAGVAVVPGTDFAAFGHVRLSYATSEENLRK 373 (385)
T ss_dssp HHHHHHHHHH-TCC-BCCCSBTTEEEEECTTT---C-SSHHHHHHHHH-HTTEECEESGGGTCTTEEEEECCSCHHHHHH
T ss_pred HHHHHHHHHC-CCe-ecCCCeeEEEEEecCCC---C-CCHHHHHHHHH-HCCeEEecccccCCCCeEEEEecCCHHHHHH
Confidence 9999999988 777 44788899999888531 1 25677777776 7899999999988788999999999999999
Q ss_pred HHHHHHHHHH
Q 014936 397 CLDRIKSFYQ 406 (415)
Q Consensus 397 ~l~~l~~~~~ 406 (415)
++++|+++++
T Consensus 374 ~l~~l~~~l~ 383 (385)
T 1b5p_A 374 ALERFARVLG 383 (385)
T ss_dssp HHHHGGGGC-
T ss_pred HHHHHHHHHh
Confidence 9999987764
No 3
>1bw0_A TAT, protein (tyrosine aminotransferase); tyrosine catabolism, pyridoxal-5'-phosphate, PLP; HET: LLP; 2.50A {Trypanosoma cruzi} SCOP: c.67.1.1
Probab=100.00 E-value=1.4e-50 Score=386.75 Aligned_cols=372 Identities=34% Similarity=0.602 Sum_probs=311.6
Q ss_pred CcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhh------hCCCCCCCCcEEEeC
Q 014936 34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSR------DLPYKLTPNDVFVTS 107 (415)
Q Consensus 34 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~------~~~~~~~~~~i~i~~ 107 (415)
++++++|+.|+|...+.+++++.+++++.+.+.......|++..|..++|+++|+++++ ..|..+++++|++|+
T Consensus 32 ~~~~i~l~~g~p~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~la~~~~~~~~~~~~~~~~~~~~~v~~~~ 111 (416)
T 1bw0_A 32 PKPIIKLSVGDPTLDKNLLTSAAQIKKLKEAIDSQECNGYFPTVGSPEAREAVATWWRNSFVHKEELKSTIVKDNVVLCS 111 (416)
T ss_dssp CSCCEECCCCCTTTTSCSCCCHHHHHHHHHHHHTTCSSSCCCTTCCHHHHHHHHHHHHHHHCCSTTTGGGCCGGGEEEES
T ss_pred CCCeEEecCcCCCcccCCCCCHHHHHHHHHHhhCCccCCcCCCCCCHHHHHHHHHHHHhhhcccccCCCCCCcceEEEeC
Confidence 46799999999865445788999999999998765556898878999999999999982 256667889999999
Q ss_pred ChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccc
Q 014936 108 GCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCG 187 (415)
Q Consensus 108 g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG 187 (415)
|+++++.+++.+++++||+|+++.|+|+++...++..|++++.+++++++++.+|+++|++.++++++++++++|+||||
T Consensus 112 g~~~al~~~~~~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~v~i~~p~nptG 191 (416)
T 1bw0_A 112 GGSHGILMAITAICDAGDYALVPQPGFPHYETVCKAYGIGMHFYNCRPENDWEADLDEIRRLKDDKTKLLIVTNPSNPCG 191 (416)
T ss_dssp HHHHHHHHHHHHHCCTTCEEEEEESCCTHHHHHHHHTTCEEEEEEEEGGGTTEECHHHHHHHCCTTEEEEEEESSCTTTC
T ss_pred ChHHHHHHHHHHhCCCCCEEEEcCCCcHhHHHHHHHcCcEEEEeecCcccCCCCCHHHHHHHhccCCeEEEEeCCCCCCC
Confidence 99999999999999999999999999999999999999999999886655677899999999988889999999999999
Q ss_pred cCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCC----CcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCC-
Q 014936 188 NVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDK----PFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDP- 262 (415)
Q Consensus 188 ~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~----~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~- 262 (415)
.++|.+++++|+++|+++|+++|+||+|.++.+++. ...++..+....++++++|+||.|+++|+|+||++++++
T Consensus 192 ~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~Glr~G~~~~~~~~ 271 (416)
T 1bw0_A 192 SNFSRKHVEDIVRLAEELRLPLFSDEIYAGMVFKGKDPNATFTSVADFETTVPRVILGGTAKNLVVPGWRLGWLLYVDPH 271 (416)
T ss_dssp CCCCHHHHHHHHHHHHHHTCCEEEECTTTTCBCCSSCTTCCCCCTTSSCCSCCEEEEEESTTTTSCGGGCCEEEEEECTT
T ss_pred cccCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCCCCccCHHHccCCCcEEEEecchhhCCCCCceEEEEEeeCch
Confidence 999999999999999999999999999999888765 445555555555789999999999999999999999764
Q ss_pred CCCCChHHHHHHHHhhccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEE
Q 014936 263 CGMFRKPKVVERMKKYFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVM 342 (415)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~ 342 (415)
.... .+...++......++++++.|.++.++|+...+.++++..++++++++.+.+.|+++|++. +..|.+|+|+|
T Consensus 272 ~~~~---~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~-~~~~~~~~~~~ 347 (416)
T 1bw0_A 272 GNGP---SFLEGLKRVGMLVCGPCTVVQAALGEALLNTPQEHLDQIVAKIEESAMYLYNHIGECIGLA-PTMPRGAMYLM 347 (416)
T ss_dssp CSCH---HHHHHHHHHHHHHTCSCHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHHHHHHTTSTTEE-ECCCCBTTEEE
T ss_pred hhHH---HHHHHHHHHhccccCCCcHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHhCCCCc-ccCCCeeEEEE
Confidence 2111 2333333332234678889999999999865568889999999999999999999988887 44678899999
Q ss_pred EecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEeeCChhhHHHHHHHHHHHHHHHH
Q 014936 343 LKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFAVDPYSLEECLDRIKSFYQRHA 409 (415)
Q Consensus 343 ~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~~~l~~~l~~l~~~~~~~~ 409 (415)
++++...+++..+..++...+++++||.+.||..|+.++++||+++.+++++++++++|.+++++..
T Consensus 348 ~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~iRis~~~~~e~l~~~l~~l~~~l~~~~ 414 (416)
T 1bw0_A 348 SRIDLEKYRDIKTDVEFFEKLLEEENVQVLPGTIFHAPGFTRLTTTRPVEVYREAVERIKAFCQRHA 414 (416)
T ss_dssp EEECGGGBSSCCSHHHHHHHHHHHHCEECEEGGGGTCTTEEEEECCSCHHHHHHHHHHHHHHHHHHB
T ss_pred EeCCHHHcCCCCCHHHHHHHHHHHCCEEEecccccCCCCeEEEEecCCHHHHHHHHHHHHHHHHHhh
Confidence 8886432221125667778877778999999999887889999999889999999999999987643
No 4
>1j32_A Aspartate aminotransferase; HET: PLP; 2.10A {Phormidium lapideum} SCOP: c.67.1.1
Probab=100.00 E-value=1.8e-50 Score=382.37 Aligned_cols=384 Identities=22% Similarity=0.364 Sum_probs=318.4
Q ss_pred CccccCCccCCcchhhHHHHHHHhhhcccccccCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcH
Q 014936 1 MEISNGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLP 80 (415)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~ 80 (415)
|.+|++.....++ .+..+.....+.. ..++++++|+.|.+. +++++.+.+++.+.+... ...|++..|..
T Consensus 1 ~~~~~~~~~~~~~--~~~~~~~~~~~~~---~~g~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~~-~~~y~~~~g~~ 70 (388)
T 1j32_A 1 MKLAARVESVSPS--MTLIIDAKAKAMK---AEGIDVCSFSAGEPD----FNTPKHIVEAAKAALEQG-KTRYGPAAGEP 70 (388)
T ss_dssp CCCCHHHHTSCCC--SSTTTHHHHHHHH---TTTCCCEECCCSSCS----SCCCHHHHHHHHHHHHTT-CCSCCCTTCCH
T ss_pred CchhhHhHhCCcc--HHHHHHHHHHHHH---hcCCCEEECCCCCCC----CCCCHHHHHHHHHHHhcC-CCCCCCCCCCH
Confidence 6677777666666 3333333222222 246789999999864 556789999999988654 35798888999
Q ss_pred HHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCC
Q 014936 81 LTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWE 160 (415)
Q Consensus 81 ~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~ 160 (415)
++|+++++++.+.+|..+++++|++|+|+++++..+++++.++||+|+++.|+|+++...++..|.+++.++.++++++.
T Consensus 71 ~l~~~la~~~~~~~g~~~~~~~v~~~~g~~~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~ 150 (388)
T 1j32_A 71 RLREAIAQKLQRDNGLCYGADNILVTNGGKQSIFNLMLAMIEPGDEVIIPAPFWVSYPEMVKLAEGTPVILPTTVETQFK 150 (388)
T ss_dssp HHHHHHHHHHHHHHCCCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEESSCCTHHHHHHHHTTCEEEEECCCGGGTTC
T ss_pred HHHHHHHHHHHHhcCCCCChhhEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHcCCEEEEecCCcccCCC
Confidence 99999999999878877889999999999999999999999999999999999999999999999999999886545677
Q ss_pred CChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCC--CCCeE
Q 014936 161 VDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS--TVPIL 238 (415)
Q Consensus 161 ~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~--~~~~i 238 (415)
+|+++|++.++++++++++++|+||||.++|.+++++|+++|+++|+++|+||+|+.+.+++....++..+.. .++++
T Consensus 151 ~d~~~l~~~l~~~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (388)
T 1j32_A 151 VSPEQIRQAITPKTKLLVFNTPSNPTGMVYTPDEVRAIAQVAVEAGLWVLSDEIYEKILYDDAQHLSIGAASPEAYERSV 230 (388)
T ss_dssp CCHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSCHHHHHTEE
T ss_pred CCHHHHHHhcCcCceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCCCHHHccccccCCEE
Confidence 9999999999888999999999999999999999999999999999999999999999887665555555442 34689
Q ss_pred EEccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhhc-cccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHH
Q 014936 239 TLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYF-DILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVD 317 (415)
Q Consensus 239 ~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~ 317 (415)
++.|+||.|+++|+|+||+++++ ++++.+.... ..+.+++++.+.++..+|+.. .+++++.+++++++++
T Consensus 231 ~~~s~sK~~~~~G~r~G~~~~~~--------~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~-~~~~~~~~~~~~~~~~ 301 (388)
T 1j32_A 231 VCSGFAKTYAMTGWRVGFLAGPV--------PLVKAATKIQGHSTSNVCTFAQYGAIAAYENS-QDCVQEMLAAFAERRR 301 (388)
T ss_dssp EEEESTTTTTCTTTCCEEEECCH--------HHHHHHHHHHHTTTCSCCHHHHHHHHHHHHSC-SHHHHHHHHHHHHHHH
T ss_pred EEeechhccCCcccceEEEEeCH--------HHHHHHHHHHhhcccCCCHHHHHHHHHHHhCC-cHHHHHHHHHHHHHHH
Confidence 99999999988999999999865 6777776653 234567888898888888743 4778899999999999
Q ss_pred HHHHHhhcCCCCcCCCCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEeeCChhhHHHH
Q 014936 318 ICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFAVDPYSLEEC 397 (415)
Q Consensus 318 ~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~~~l~~~ 397 (415)
++.+.|+++|++. +..|.+++++|++++.. + .+..++...+++++||.+.||..|+.++++|++++.++++++++
T Consensus 302 ~l~~~L~~~~g~~-~~~~~~~~~~~~~~~~~---~-~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~~~~~~i~~~ 376 (388)
T 1j32_A 302 YMLDALNAMPGLE-CPKPDGAFYMFPSIAKT---G-RSSLDFCSELLDQHQVATVPGAAFGADDCIRLSYATDLDTIKRG 376 (388)
T ss_dssp HHHHHHHTCTTCB-CCCCCBTTEECCBCGGG---T-CCHHHHHHHHHHHHCEECEEGGGGTCTTBEEEECCSCHHHHHHH
T ss_pred HHHHHHhhCCCCc-ccCCCeeEEEEEecCCC---C-CCHHHHHHHHHHhCCEEEeChhhhCCCCcEEEEecCCHHHHHHH
Confidence 9999999988888 44778888899877531 1 25677777776667999999998887899999999899999999
Q ss_pred HHHHHHHHHHH
Q 014936 398 LDRIKSFYQRH 408 (415)
Q Consensus 398 l~~l~~~~~~~ 408 (415)
+++|+++++++
T Consensus 377 ~~~l~~~l~~~ 387 (388)
T 1j32_A 377 MERLEKFLHGI 387 (388)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHh
Confidence 99999988753
No 5
>3h14_A Aminotransferase, classes I and II; YP_167802.1, SPO258 structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.90A {Silicibacter pomeroyi dss-3}
Probab=100.00 E-value=6.9e-50 Score=378.80 Aligned_cols=378 Identities=21% Similarity=0.342 Sum_probs=307.7
Q ss_pred CccccCCccCCcchhhHHHHHHHhhhcccccccCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcH
Q 014936 1 MEISNGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLP 80 (415)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~ 80 (415)
|.++ +.....++ .+........+.. .++++++||+.|++. +++++.+++++.+.+.... ..|++..|..
T Consensus 3 ~~~~-~~~~~~~~--~~~~~~~~~~~~~---~~g~~~i~l~~g~~~----~~~~~~v~~a~~~~~~~~~-~~y~~~~g~~ 71 (391)
T 3h14_A 3 LKNS-SRSAVDPF--IVMDVMEAARRAE---EAGRRIIHMEVGQPG----TGAPRGAVEALAKSLETDA-LGYTVALGLP 71 (391)
T ss_dssp CCCC-STTCCCCC--TTHHHHHHHHHHH---HTTCCCEECCCSSCS----SCSCHHHHHHHHHHHC-----------CCH
T ss_pred chhh-hHhhcCcc--hHHHHHHHHHHHH---hcCCCeEEccCCCCC----CCCCHHHHHHHHHHHhcCC-CCCCCCCChH
Confidence 4566 66677776 4444443322221 347889999999865 6678999999999887643 5898888999
Q ss_pred HHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCC
Q 014936 81 LTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWE 160 (415)
Q Consensus 81 ~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~ 160 (415)
++|+++++++++.+|.++++++|++|+|+++++..++.+++++||+|+++.|+|..+...++..|.++..+++++++++.
T Consensus 72 ~lr~~ia~~~~~~~g~~~~~~~v~~t~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ 151 (391)
T 3h14_A 72 ALRQRIARLYGEWYGVDLDPGRVVITPGSSGGFLLAFTALFDSGDRVGIGAPGYPSYRQILRALGLVPVDLPTAPENRLQ 151 (391)
T ss_dssp HHHHHHHHHHHHHHCCCCCGGGEEEESSHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHHTTCEEEEEECCGGGTTS
T ss_pred HHHHHHHHHHHHHhCCCCCHHHEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCccHHHHHHHcCCEEEEeecCcccCCC
Confidence 99999999999888888899999999999999999999999999999999999999999999999999999987766778
Q ss_pred CChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEE
Q 014936 161 VDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTL 240 (415)
Q Consensus 161 ~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~ 240 (415)
+|++++++. +++++++++|+||||.+++.+++++|+++|+++|+++|+||+|+++.+++... ++..+ .++++++
T Consensus 152 ~d~~~l~~~---~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~-~~~~~--~~~~i~~ 225 (391)
T 3h14_A 152 PVPADFAGL---DLAGLMVASPANPTGTMLDHAAMGALIEAAQAQGASFISDEIYHGIEYEAKAV-TALEL--TDECYVI 225 (391)
T ss_dssp CCHHHHTTS---CCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBSSSCCC-CGGGT--CSSSEEE
T ss_pred CCHHHHHhc---CCeEEEECCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEECcchhcccCCCCc-Chhhc--CCCEEEE
Confidence 899999887 78899999999999999999999999999999999999999999988876532 22222 4568999
Q ss_pred ccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhhc-cccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHH
Q 014936 241 GSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYF-DILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDIC 319 (415)
Q Consensus 241 ~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l 319 (415)
+|+||.++++|+|+||+++++ ++++.+.... ..+.+++++.+.++.++++ ..+++++.+++++++++.+
T Consensus 226 ~s~sK~~g~~G~r~G~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~--~~~~~~~~~~~~~~~~~~l 295 (391)
T 3h14_A 226 NSFSKYFSMTGWRVGWMVVPE--------DQVRVVERIAQNMFICAPHASQVAALAALD--CDAELQANLDVYKANRKLM 295 (391)
T ss_dssp EESSSTTCCTTSCCEEEECCG--------GGHHHHHHHHHHTTCCCCHHHHHHHHHHTT--CHHHHHHHHHHHHHHHHHH
T ss_pred EechhccCCccceeEEEEeCH--------HHHHHHHHHHhhhccCCCHHHHHHHHHHhC--ChHHHHHHHHHHHHHHHHH
Confidence 999999989999999999865 5667776653 3356788899999888887 4688999999999999999
Q ss_pred HHHhhcCCCCcCCCCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCC---CCeEEEEeeCChhhHHH
Q 014936 320 YNKIKEIPCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGL---KNWLRVTFAVDPYSLEE 396 (415)
Q Consensus 320 ~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~---~~~iRi~~~~~~~~l~~ 396 (415)
.+.|+++ ++..+..|.+++++|+.++... .+..++...+++++||.+.||..|+. ++++||+++.+++++++
T Consensus 296 ~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~~iRis~~~~~~~i~~ 370 (391)
T 3h14_A 296 LERLPKA-GFTRIAPPDGAFYVYADVSDLT----DDSRAFAAEILEKAGVAVTPGLDFDPERGAGTLRFSYARATADIEE 370 (391)
T ss_dssp HHHHHHH-TCCCBCCCCBTTEEEEECTTTC----SCHHHHHHHHHHHHCEECEEGGGTCTTTGGGEEEEECCSCHHHHHH
T ss_pred HHHHHHc-CCCcccCCCeeEEEEEecCccC----CCHHHHHHHHHHHCCEEEcCchhhCCCCCCCeEEEEecCCHHHHHH
Confidence 9999987 4432447888899999886421 25678888887777999999999876 57999999889999999
Q ss_pred HHHHHHHHHHHHHH
Q 014936 397 CLDRIKSFYQRHAK 410 (415)
Q Consensus 397 ~l~~l~~~~~~~~~ 410 (415)
++++|++++++...
T Consensus 371 ~l~~l~~~~~~~~~ 384 (391)
T 3h14_A 371 GLDRLEAFMQARGE 384 (391)
T ss_dssp HHHHHHHHHHHC--
T ss_pred HHHHHHHHHHHhcc
Confidence 99999999987554
No 6
>2x5d_A Probable aminotransferase; HET: LLP PLP; 2.25A {Pseudomonas aeruginosa}
Probab=100.00 E-value=2.4e-49 Score=377.64 Aligned_cols=386 Identities=20% Similarity=0.307 Sum_probs=300.9
Q ss_pred CccccCCccCCcchhhHHHHHHHhhhcccccccCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcH
Q 014936 1 MEISNGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLP 80 (415)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~ 80 (415)
|.++++.....++ .+........ ++. ..+++++||+.|.+. +++++.+++++.+.+.......|++..|..
T Consensus 8 ~~~~~~~~~~~~~--~~~~~~~~~~-~~~--~~g~~~idl~~g~~~----~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~ 78 (412)
T 2x5d_A 8 ARRFARIDRLPPY--VFNITAELKM-AAR--RRGEDIIDLSMGNPD----GPTPPHIVEKLCTVAQREDTHGYSTSRGIP 78 (412)
T ss_dssp ---------------CHHHHHHHHH-HHH--HTTCCCEECSSCCCC----SCCCHHHHHHHHHTC---------CTTCCH
T ss_pred cchhHHHhhcCch--HHHHHHHHHH-HHh--hcCCCEEecCCCCCC----CCCCHHHHHHHHHHHhCCCCCCCCCCCCcH
Confidence 4455555555554 3333333222 121 347789999999864 557899999999887654345788778999
Q ss_pred HHHHHHHHHHhhhCCCCCCC-CcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCC
Q 014936 81 LTRRAIAEYLSRDLPYKLTP-NDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGW 159 (415)
Q Consensus 81 ~lr~~ia~~~~~~~~~~~~~-~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~ 159 (415)
++|+.+++++.+.+|..+++ ++|++|+|+++++.+++.++.++||+|+++.|+|+++...++..|.++..++.++++++
T Consensus 79 ~l~~~ia~~~~~~~g~~~~~~~~v~~t~g~~~a~~~~~~~~~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~ 158 (412)
T 2x5d_A 79 RLRRAISHWYRDRYDVQIDPESEAIVTIGSKEGLAHLMLATLDHGDTILVPNPSYPIHIYGAVIAGAQVRSVPLVPGIDF 158 (412)
T ss_dssp HHHHHHHHHHHHHHCCCCCTTTSEEEESCHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHHHTCEEEEEECSTTSCH
T ss_pred HHHHHHHHHHHHHhCCCCCCCcCEEEcCChHHHHHHHHHHhCCCCCEEEEcCCCchhHHHHHHHcCCEEEEeecCCccCC
Confidence 99999999998877877788 79999999999999999999999999999999999999999999999999998654456
Q ss_pred CCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCC-CCCeE
Q 014936 160 EVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS-TVPIL 238 (415)
Q Consensus 160 ~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~-~~~~i 238 (415)
.+|++.+++++++++++|++++|+||||.++|.+++++|+++|+++|+++|+||+|..+.+++....++..+.. .++++
T Consensus 159 ~~d~~~l~~~i~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i 238 (412)
T 2x5d_A 159 FNELERAIRESIPKPRMMILGFPSNPTAQCVELDFFERVVALAKQYDVMVVHDLAYADIVYDGWKAPSIMQVPGAKDIAV 238 (412)
T ss_dssp HHHHHHHHHTEESCCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTTGGGTEE
T ss_pred CCCHHHHHHhcccCceEEEECCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCChhhccCccCcEE
Confidence 67899999999888899999999999999999999999999999999999999999999887655555555532 45789
Q ss_pred EEccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhhcc-ccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHH
Q 014936 239 TLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFD-ILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVD 317 (415)
Q Consensus 239 ~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~ 317 (415)
++.|+||.|+++|+|+||+++++ ++++.+..... .+++.+++.+.++..+|+.. ++++++.+++++++++
T Consensus 239 ~~~s~sK~~~~~G~r~G~~~~~~--------~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~-~~~~~~~~~~~~~~~~ 309 (412)
T 2x5d_A 239 EFFTLSKSYNMAGWRIGFMVGNP--------ELVSALARIKSYHDYGTFTPLQVAAIAALEGD-QQCVRDIARQYQQRRD 309 (412)
T ss_dssp EEEECC-CCSCTTSCCEEEEECH--------HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHSC-SHHHHHHHHHHHHHHH
T ss_pred EEecCccccCCcccceEEEEcCH--------HHHHHHHHHHhhhccCCCHHHHHHHHHHHhCC-HHHHHHHHHHHHHHHH
Confidence 99999999988999999999854 67777766532 35678899999999999754 3678899999999999
Q ss_pred HHHHHhhcCCCCcCCCCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCC--CCeEEEEeeCChhhHH
Q 014936 318 ICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGL--KNWLRVTFAVDPYSLE 395 (415)
Q Consensus 318 ~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~--~~~iRi~~~~~~~~l~ 395 (415)
.+.+.|+++ ++. +..|.+|+|+|++++... . ..+..++...+++++||.+.||..|+. .+++||+++.++++++
T Consensus 310 ~l~~~L~~~-g~~-~~~~~~g~~~~~~~~~~~-~-~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~iRis~~~~~~~l~ 385 (412)
T 2x5d_A 310 VLVKGLREA-GWM-VENPKASMYVWAKIPEPY-A-HLGSLEFAKKLLQDAKVSVSPGIGFGDYGDDHVRFALIENRDRLR 385 (412)
T ss_dssp HHHHHHHHH-TCC-CCCCSBSSEEEEECCTTT-G-GGCHHHHHHHHHHHHCEECEEGGGGCGGGTTEEEEECCSCHHHHH
T ss_pred HHHHHHHHC-CCE-ecCCCeeeEEEEEcCCcc-C-CCCHHHHHHHHHHHCCEEEeCchhhCCCCCCeEEEEecCCHHHHH
Confidence 999999987 777 446778899999886310 0 014667778877778999999988864 5799999988999999
Q ss_pred HHHHHHHHHHHHH
Q 014936 396 ECLDRIKSFYQRH 408 (415)
Q Consensus 396 ~~l~~l~~~~~~~ 408 (415)
+++++|.++++++
T Consensus 386 ~~l~~l~~~l~~~ 398 (412)
T 2x5d_A 386 QAVRGIKAMFRAD 398 (412)
T ss_dssp HHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhc
Confidence 9999999998763
No 7
>1gd9_A Aspartate aminotransferase; pyridoxal enzyme, temperature dependence O substrate recognition; HET: PLP; 1.80A {Pyrococcus horikoshii} SCOP: c.67.1.1 PDB: 1gde_A* 1dju_A*
Probab=100.00 E-value=5.8e-49 Score=372.25 Aligned_cols=379 Identities=25% Similarity=0.447 Sum_probs=314.8
Q ss_pred CccccCCccCCcchhhHHHHHHHhhhcccccccCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcH
Q 014936 1 MEISNGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLP 80 (415)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~ 80 (415)
|.+|++....+++ .+.++.....+ .+++++|+.|.++ +++++.+.+++.+.+.... ..|++..|..
T Consensus 1 ~~~~~~~~~~~~~--~~~~~~~~~~~-------~~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~~~-~~y~~~~g~~ 66 (389)
T 1gd9_A 1 MALSDRLELVSAS--EIRKLFDIAAG-------MKDVISLGIGEPD----FDTPQHIKEYAKEALDKGL-THYGPNIGLL 66 (389)
T ss_dssp -CHHHHHHHSCCC--HHHHHHHHHHT-------CSSCEECCCCSCS----SCCCHHHHHHHHHHHHTTC-CSCCCTTCCH
T ss_pred CchhhHhHhCChh--HHHHHHHHHhh-------hcCeEecCCCCCC----CCCCHHHHHHHHHHHhCCC-CCCCCCCCcH
Confidence 6677777777777 56655553321 2468999999864 5568999999999887643 4788878999
Q ss_pred HHHHHHHHHHhhhCCCCCCCCc-EEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCC
Q 014936 81 LTRRAIAEYLSRDLPYKLTPND-VFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGW 159 (415)
Q Consensus 81 ~lr~~ia~~~~~~~~~~~~~~~-i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~ 159 (415)
++|+++++++.+.+|..+++++ +++|+|+++++..++.++.++||+|+++.|+|+++...++..|.++..++.++++++
T Consensus 67 ~l~~~la~~~~~~~g~~~~~~~~v~~~~g~~~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~ 146 (389)
T 1gd9_A 67 ELREAIAEKLKKQNGIEADPKTEIMVLLGANQAFLMGLSAFLKDGEEVLIPTPAFVSYAPAVILAGGKPVEVPTYEEDEF 146 (389)
T ss_dssp HHHHHHHHHHHHHHCCCCCTTTSEEEESSTTHHHHHHHTTTCCTTCEEEEEESCCTTHHHHHHHHTCEEEEEECCGGGTT
T ss_pred HHHHHHHHHHHHHhCCCCCCCCeEEEcCChHHHHHHHHHHhCCCCCEEEEcCCCchhHHHHHHHCCCEEEEeccCCccCC
Confidence 9999999999887787778899 999999999999999999999999999999999999999999999999998654567
Q ss_pred CCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCC-CCCeE
Q 014936 160 EVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS-TVPIL 238 (415)
Q Consensus 160 ~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~-~~~~i 238 (415)
.+|+++|++.++++++++++++|+||||.++|.+++++|+++|+++|+++|+||+|+.+.+++....++..+.. .++++
T Consensus 147 ~~d~~~l~~~l~~~~~~v~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i 226 (389)
T 1gd9_A 147 RLNVDELKKYVTDKTRALIINSPCNPTGAVLTKKDLEEIADFVVEHDLIVISDEVYEHFIYDDARHYSIASLDGMFERTI 226 (389)
T ss_dssp CCCHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTCCCCCGGGSTTCGGGEE
T ss_pred CCCHHHHHHhcCcCceEEEEECCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEehhhhhcccCCCCCCCHhhccCCCCCEE
Confidence 78999999999888899999999999999999999999999999999999999999998887653444544432 45689
Q ss_pred EEccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhhcc-ccCCchhHHHHHHHHhhCCCcH-HHHHHHHHHHHHHH
Q 014936 239 TLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFD-ILGDPATFIQAAVPSILQQPDE-VFFKKTLNLLKQSV 316 (415)
Q Consensus 239 ~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~a~~~~l~~~~~-~~~~~~~~~~~~~~ 316 (415)
+++|+||.|+++|+|+||+++++ ++++.+..... .+++.+++.+.++.++|+.... .++++.++++++++
T Consensus 227 ~~~s~sK~~~~~G~r~G~~~~~~--------~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~ 298 (389)
T 1gd9_A 227 TVNGFSKTFAMTGWRLGFVAAPS--------WIIERMVKFQMYNATCPVTFIQYAAAKALKDERSWKAVEEMRKEYDRRR 298 (389)
T ss_dssp EEEESTTTTTCGGGCCEEEECCH--------HHHHHHHHHHTTTTCSCCHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHH
T ss_pred EEecChhhcCCcccceEEEEECH--------HHHHHHHHHHhhhccCCCHHHHHHHHHHHhCCCcchHHHHHHHHHHHHH
Confidence 99999999988999999999864 67777776533 3467788999999999976321 27888999999999
Q ss_pred HHHHHHhhcCCCCcCCCCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCC--CCeEEEEeeCChhhH
Q 014936 317 DICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGL--KNWLRVTFAVDPYSL 394 (415)
Q Consensus 317 ~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~--~~~iRi~~~~~~~~l 394 (415)
+.+.+.|+++ ++. +..|.+|+++|++++.. + .+..++...+++++||.+.||..|+. ++++||+++.+++++
T Consensus 299 ~~l~~~L~~~-g~~-~~~~~~~~~~~~~~~~~---~-~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRi~~~~~~~~i 372 (389)
T 1gd9_A 299 KLVWKRLNEM-GLP-TVKPKGAFYIFPRIRDT---G-LTSKKFSELMLKEARVAVVPGSAFGKAGEGYVRISYATAYEKL 372 (389)
T ss_dssp HHHHHHHHHT-TCC-CCCCCBTTEECCBCGGG---T-CCHHHHHHHHHHHTCEECEEGGGGCGGGTTBEEEECCSCHHHH
T ss_pred HHHHHHHHHc-CCe-ecCCCeeeEEEEeccCC---C-CCHHHHHHHHHHhCCEEEeCchhhCCCCCCeEEEEecCCHHHH
Confidence 9999999988 787 44678888999888531 1 25667777776578999999988864 679999998899999
Q ss_pred HHHHHHHHHHHHH
Q 014936 395 EECLDRIKSFYQR 407 (415)
Q Consensus 395 ~~~l~~l~~~~~~ 407 (415)
++++++|.+++++
T Consensus 373 ~~~l~~l~~~~~~ 385 (389)
T 1gd9_A 373 EEAMDRMERVLKE 385 (389)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh
Confidence 9999999998864
No 8
>3fvs_A Kynurenine--oxoglutarate transaminase 1; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: LLP; 1.50A {Homo sapiens} SCOP: c.67.1.1 PDB: 3fvu_A* 3fvx_A* 1w7l_A* 1w7m_A* 1w7n_A*
Probab=100.00 E-value=1.3e-49 Score=380.78 Aligned_cols=381 Identities=22% Similarity=0.365 Sum_probs=319.2
Q ss_pred ccccCCccCCcchhhHHHHHHHhhhcccccccCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCC-CCCCCCCCCcH
Q 014936 2 EISNGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEK-FNGYAPTAGLP 80 (415)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~-~~~y~~~~g~~ 80 (415)
.++++.....++ .+.++.... .+.++++|+.|+|+ +++++.+++++.+.+.... ...|++..|..
T Consensus 5 ~~~~~~~~~~~~--~~~~~~~~~--------~~~~~i~l~~g~~~----~~~~~~v~~a~~~~~~~~~~~~~y~~~~g~~ 70 (422)
T 3fvs_A 5 LQARRLDGIDYN--PWVEFVKLA--------SEHDVVNLGQGFPD----FPPPDFAVEAFQHAVSGDFMLNQYTKTFGYP 70 (422)
T ss_dssp CSCGGGTTCCCC--HHHHHHHHH--------HTSCCEECCCSSCS----SCCCHHHHHHHHHHHHSCGGGGSCCCTTCCH
T ss_pred hHHHHhhccCcc--HHHHHHHHh--------hcCCceEeCCCCCC----CCCCHHHHHHHHHHHhCCCccCCCCCCCCCH
Confidence 456666666666 555554421 24678999999965 6788999999999987644 45899888999
Q ss_pred HHHHHHHHHHhhhCCCCCCC-CcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccC----
Q 014936 81 LTRRAIAEYLSRDLPYKLTP-NDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLP---- 155 (415)
Q Consensus 81 ~lr~~ia~~~~~~~~~~~~~-~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~---- 155 (415)
++|+++++++++.+|..+++ ++|++|+|+++++..++.+++++||+|+++.|+|+++...++..|.++..+++++
T Consensus 71 ~lr~~la~~~~~~~g~~~~~~~~i~~~~g~~~a~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~ 150 (422)
T 3fvs_A 71 PLTKILASFFGELLGQEIDPLRNVLVTVGGYGALFTAFQALVDEGDEVIIIEPFFDCYEPMTMMAGGRPVFVSLKPGPIQ 150 (422)
T ss_dssp HHHHHHHHHHHHHHTCCCCHHHHEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECBCCCCC
T ss_pred HHHHHHHHHHHHhhCCCCCCCCcEEEECChHHHHHHHHHHHcCCCCEEEEcCCCchhhHHHHHHcCCEEEEEeccccccc
Confidence 99999999999888888888 7999999999999999999999999999999999999999999999999999865
Q ss_pred ------CCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCccccc
Q 014936 156 ------DKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMG 229 (415)
Q Consensus 156 ------~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~ 229 (415)
..++.+|+++++++++++++++++++|+||||.++|.+++++|+++|+++|+++|+||+|+++.+++....++.
T Consensus 151 ~G~~~~~~~~~~d~~~l~~~~~~~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~ 230 (422)
T 3fvs_A 151 NGELGSSSNWQLDPMELAGKFTSRTKALVLNTPNNPLGKVFSREELELVASLCQQHDVVCITDEVYQWMVYDGHQHISIA 230 (422)
T ss_dssp SSSCCBGGGSBCCHHHHHTTCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGG
T ss_pred ccccccccCCCCCHHHHHhhcCCCceEEEECCCCCCCCcCCCHHHHHHHHHHHHHcCcEEEEEccchhhccCCCCCCChh
Confidence 23567899999999998999999999999999999999999999999999999999999999998877666666
Q ss_pred ccCC-CCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhhcc-ccCCchhHHHHHHHHhhCC------Cc
Q 014936 230 VFGS-TVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFD-ILGDPATFIQAAVPSILQQ------PD 301 (415)
Q Consensus 230 ~~~~-~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~a~~~~l~~------~~ 301 (415)
.+.. .++++++.|+||.|+++|+|+||+++++ ++++.+..... ..++++++.+.++..+|+. ..
T Consensus 231 ~~~~~~~~~i~~~S~sK~~g~~G~r~G~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~ 302 (422)
T 3fvs_A 231 SLPGMWERTLTIGSAGKTFSATGWKVGWVLGPD--------HIMKHLRTVHQNSVFHCPTQSQAAVAESFEREQLLFRQP 302 (422)
T ss_dssp GSTTTGGGEEEEEEHHHHHTCGGGCCEEEECCH--------HHHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHTTTCT
T ss_pred hcccccCcEEEEecchhccCCccceEEEEEeCH--------HHHHHHHHHHhhccCCCCcHHHHHHHHHHhhccccccch
Confidence 6543 3678999999999999999999999865 67777766532 3567788999998888863 12
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCccccCCCCC---------HHHHHHHHHhhcCeEEE
Q 014936 302 EVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLDDIID---------DIDFCFKLAKEESVIIL 372 (415)
Q Consensus 302 ~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~~~~~~---------~~~~~~~ll~~~gi~v~ 372 (415)
+.++++.+++++++++.+.+.|+++ ++. +..|.+|+|+|++++..... ..+ ..+++..+++++||.+.
T Consensus 303 ~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ll~~~gv~v~ 379 (422)
T 3fvs_A 303 SSYFVQFPQAMQRCRDHMIRSLQSV-GLK-PIIPQGSYFLITDISDFKRK-MPDLPGAVDEPYDRRFVKWMIKNKGLVAI 379 (422)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHTT-TCE-EEBCSBSSEEEEECHHHHHH-CCCCCCCTTCCHHHHHHHHHHHHHCEECE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHc-CCe-ecCCCeeeEEEEechhhccc-ccccccccccccHHHHHHHHHHhcCEEEe
Confidence 4678899999999999999999998 787 44889999999988542110 001 45788888888899999
Q ss_pred cCCCCCC-------CCeEEEEeeCChhhHHHHHHHHHHHHHH
Q 014936 373 PGTAVGL-------KNWLRVTFAVDPYSLEECLDRIKSFYQR 407 (415)
Q Consensus 373 ~g~~~~~-------~~~iRi~~~~~~~~l~~~l~~l~~~~~~ 407 (415)
||+.|+. .+++||+++.+++++++++++|++++++
T Consensus 380 ~g~~f~~~~~~~~~~~~iRis~~~~~e~i~~~l~~l~~~l~~ 421 (422)
T 3fvs_A 380 PVSIFYSVPHQKHFDHYIRFCFVKDEATLQAMDEKLRKWKVE 421 (422)
T ss_dssp EGGGGSCHHHHTTSCSEEEEECCCCHHHHHHHHHHHHHHHHC
T ss_pred CcHHhcCCcCCCCCCCeEEEEecCCHHHHHHHHHHHHHHHhh
Confidence 9998853 6899999988999999999999988753
No 9
>3ele_A Amino transferase; RER070207001803, structural genomics, JOI for structural genomics, JCSG; HET: MSE PLP; 2.10A {Eubacterium rectale}
Probab=100.00 E-value=2.7e-49 Score=375.61 Aligned_cols=381 Identities=21% Similarity=0.370 Sum_probs=307.9
Q ss_pred CccccCCccC--CcchhhHHHHHHHhhhcccccccCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCC---CCCCCC
Q 014936 1 MEISNGGIDN--TGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEK---FNGYAP 75 (415)
Q Consensus 1 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~---~~~y~~ 75 (415)
|.+|.++.+. .++ .++++..... ......++++++||+.|+|. +++++.+.+++.+.+.... ...|++
T Consensus 2 ~~~~~~~~~~~~~~~--~~~~~~~~~~-~~~~~~~~~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~~~~~~~~~y~~ 74 (398)
T 3ele_A 2 MVVNESMYQLGSVRS--AIRELFEYGK-KRAAIVGKENVYDFSIGNPS----IPAPQIVNDTIKELVTDYDSVALHGYTS 74 (398)
T ss_dssp CSSCHHHHHHHHCCC--HHHHHHHHHH-HHHHHHCGGGCEECCSCCCC----SCCCHHHHHHHHHHHHHSCHHHHHSCCC
T ss_pred cchhHHHhccccCch--hHHHHHHHHH-HHHhhcCCCCeEEeecCCCC----CCCCHHHHHHHHHHHhcCCccccCCcCC
Confidence 6777777776 355 4555443222 11111245789999999765 5678999999999887532 457988
Q ss_pred CCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCC-CEEEEcCCCCcchHHHHHhCCCeEEEeecc
Q 014936 76 TAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPG-ANILLPRPGFPIYELSAAFRHIEVRHFDLL 154 (415)
Q Consensus 76 ~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~g-d~vi~~~p~y~~~~~~~~~~g~~~~~~~~~ 154 (415)
..|..++|+++++++++.+|.++++++|++|+|+++++..++.+++++| |+|+++.|+|+.+...++..|.++..++++
T Consensus 75 ~~g~~~lr~~la~~l~~~~g~~~~~~~i~~~~g~~~al~~~~~~l~~~g~d~vl~~~p~~~~~~~~~~~~g~~~~~v~~~ 154 (398)
T 3ele_A 75 AQGDVETRAAIAEFLNNTHGTHFNADNLYMTMGAAASLSICFRALTSDAYDEFITIAPYFPEYKVFVNAAGARLVEVPAD 154 (398)
T ss_dssp TTCCHHHHHHHHHHHHHHHCCCCCGGGEEEESSHHHHHHHHHHHHCCSTTCEEEEESSCCTHHHHHHHHTTCEEEEECCC
T ss_pred CCCcHHHHHHHHHHHHHHhCCCCChHHEEEccCHHHHHHHHHHHHcCCCCCEEEEeCCCchhhHHHHHHcCCEEEEEecC
Confidence 8899999999999999888888899999999999999999999999999 999999999999999999999999999986
Q ss_pred CCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhh------cCcEEEEccccCCcccCCCCcccc
Q 014936 155 PDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANK------LKTLVIADEVYGHLVFGDKPFVPM 228 (415)
Q Consensus 155 ~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~------~~~~li~De~~~~~~~~~~~~~~~ 228 (415)
+ +++.+|+++|+++++++++++++++|+||||.+++.+++++|+++|++ +|+++|+||+|+.+.+++......
T Consensus 155 ~-~~~~~d~~~l~~~l~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~~~~~~li~De~~~~~~~~~~~~~~~ 233 (398)
T 3ele_A 155 T-EHFQIDFDALEERINAHTRGVIINSPNNPSGTVYSEETIKKLSDLLEKKSKEIGRPIFIIADEPYREIVYDGIKVPFV 233 (398)
T ss_dssp T-TTSSCCHHHHHHTCCTTEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHHHHHTSCCEEEEECTTTTCBCTTCCCCCG
T ss_pred C-cCCcCCHHHHHHHhCcCCCEEEEcCCCCCCCCCCCHHHHHHHHHHHHhhhhccCCCeEEEEeccccccccCCCCcCCh
Confidence 4 367899999999999899999999999999999999999999999999 999999999999998876543332
Q ss_pred cccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhhcc--ccCCchhHHHHHHHHhhCCCcHHHHH
Q 014936 229 GVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFD--ILGDPATFIQAAVPSILQQPDEVFFK 306 (415)
Q Consensus 229 ~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~a~~~~l~~~~~~~~~ 306 (415)
. ...+++++++|+||.|+++|+|+||+++++.. .....+.+.+..... .+.+++.+.+.++..+++...
T Consensus 234 ~--~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~----- 304 (398)
T 3ele_A 234 T--KYYDNTLVCYSYSKSLSLPGERIGYVLVPDEV--YDKAELYAAVCGAGRALGYVCAPSLFQKMIVKCQGATG----- 304 (398)
T ss_dssp G--GTCSSEEEEEESTTTSSCTTTCCEEEECCTTS--TTHHHHHHHHHHHHHHTTCCCSCHHHHHHHTTCTTCCC-----
T ss_pred H--hhcCCeEEEEehhhcCCCccceeEEEEEcchh--hhHHHHHHHHHHHhhhccccCCCHHHHHHHHHHhcCHH-----
Confidence 2 23357899999999998999999999997632 111124444443322 135667788888888887542
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEE
Q 014936 307 KTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVT 386 (415)
Q Consensus 307 ~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~ 386 (415)
.+++++++++.+.+.|+++ ++. +..|.+++++|++++. .+..++... +.++||.+.||..|+.++++||+
T Consensus 305 -~~~~~~~~~~~l~~~L~~~-g~~-~~~~~~~~~~~~~~~~------~~~~~~~~~-l~~~gi~v~~g~~~~~~~~iRis 374 (398)
T 3ele_A 305 -DINAYKENRDLLYEGLTRI-GYH-CFKPDGAFYMFVKALE------DDSNAFCEK-AKEEDVLIVAADGFGCPGWVRIS 374 (398)
T ss_dssp -CHHHHHHHHHHHHHHHHHH-TCC-EECCSBSSEEEEECSS------SCHHHHHHH-HHTTTEECEESGGGTCTTEEEEE
T ss_pred -HHHHHHHHHHHHHHHHHHc-CCe-ecCCCeeEEEEEEcCC------CCHHHHHHH-HHHCCEEEeCccccCCCCeEEEE
Confidence 3567788888899999887 777 4478889999998864 145666665 46789999999999888999999
Q ss_pred eeCChhhHHHHHHHHHHHHHHH
Q 014936 387 FAVDPYSLEECLDRIKSFYQRH 408 (415)
Q Consensus 387 ~~~~~~~l~~~l~~l~~~~~~~ 408 (415)
++.+++++++++++|.++++++
T Consensus 375 ~~~~~e~i~~~l~~l~~~l~~~ 396 (398)
T 3ele_A 375 YCVDREMIKHSMPAFEKIYKKY 396 (398)
T ss_dssp CCSCHHHHHHHHHHHHHHHHHH
T ss_pred ecCCHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999998765
No 10
>3aow_A Putative uncharacterized protein PH0207; protein-PLP-AKG triple complex, schiff-base linkage, kynuren aminotransferase; HET: PLP AKG; 1.56A {Pyrococcus horikoshii} PDB: 3aov_A* 3ath_A* 3av7_A* 1x0m_A 1wst_A*
Probab=100.00 E-value=6.3e-49 Score=377.71 Aligned_cols=354 Identities=22% Similarity=0.330 Sum_probs=299.8
Q ss_pred CcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcC--CCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHH
Q 014936 34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSE--KFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQ 111 (415)
Q Consensus 34 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~--~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~ 111 (415)
++++|+|+.|.|+.. +.+++.+.+++.+.+... ....|+++.|.++||+++++++++.+|.. ++++|++|+|+++
T Consensus 75 ~~~~i~l~~g~p~~~--~~p~~~v~~a~~~~l~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~-~~~~v~~t~G~~~ 151 (448)
T 3aow_A 75 TSDIISLAGGLPNPK--TFPKEIIRDILVEIMEKYADKALQYGTTKGFTPLRETLMKWLGKRYGIS-QDNDIMITSGSQQ 151 (448)
T ss_dssp TSSSEECCCCCCCGG--GSCHHHHHHHHHHHHHHSHHHHHSCCCTTCCHHHHHHHHHHHHHHHCCC-TTSEEEEESSHHH
T ss_pred CCCcEeCCCCCCCch--hCCHHHHHHHHHHHHHhhhHHHhCCCCCCCcHHHHHHHHHHHHHhcCcC-ChhhEEEeCcHHH
Confidence 456899999998632 446788999998887653 23479888899999999999997767766 7899999999999
Q ss_pred HHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcC----C--CceEE-EecCCCC
Q 014936 112 AIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLAD----Q--NTVAL-VIINPGN 184 (415)
Q Consensus 112 al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~----~--~~~~v-~i~~p~n 184 (415)
++..++++++++||+|+++.|+|+++...++..|++++.++.+++ ++|+++|+++++ + ++++| ++++|+|
T Consensus 152 al~~~~~~l~~~Gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~---g~d~~~L~~~l~~~~~~~~~~k~v~~~~~~~N 228 (448)
T 3aow_A 152 ALDLIGRVFLNPGDIVVVEAPTYLAALQAFNFYEPQYIQIPLDDE---GMKVEILEEKLKELKSQGKKVKVVYTVPTFQN 228 (448)
T ss_dssp HHHHHHHHHCCTTCEEEEEESCCHHHHHHHHTTCCEEEEEEEETT---EECHHHHHHHHHHHHHTTCCEEEEEECCSSCT
T ss_pred HHHHHHHHHcCCCCEEEEeCCChHHHHHHHHHcCCEEEEeccCCC---CCCHHHHHHHHhhhhccCCCCeEEEECCCCCC
Confidence 999999999999999999999999999999999999999988542 489999999886 5 67887 5789999
Q ss_pred ccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCC
Q 014936 185 PCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCG 264 (415)
Q Consensus 185 ptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~ 264 (415)
|||.++|.+++++|+++|+++|+++|+||+|..+.+++....++..++..++++++.||||.|+ +|+|+||+++++
T Consensus 229 PtG~~~~~~~l~~i~~la~~~~~~lI~De~y~~~~~~g~~~~~~~~~~~~~~vi~~~S~SK~~~-~GlriG~v~~~~--- 304 (448)
T 3aow_A 229 PAGVTMNEDRRKYLLELASEYDFIVVEDDPYGELRYSGNPEKKIKALDNEGRVIYLGTFSKILA-PGFRIGWMVGDP--- 304 (448)
T ss_dssp TTCCCCCHHHHHHHHHHHHHHTCEEEEECSCTTCBCSSCCCCCTGGGCTTSCEEEEEESTTTTC-GGGCCEEEEECH---
T ss_pred CcCCCCCHHHHHHHHHHHHHcCCEEEEECCCccccCCCCCCcCHHhcCCCCCEEEEccchhhcc-ccccEEEEEeCH---
Confidence 9999999999999999999999999999999999988766666777766678999999999988 999999999965
Q ss_pred CCChHHHHHHHHhhcc-ccCCchhHHHHHHHHhhCCCc-HHHHHHHHHHHHHHHHHHHHHhhc-CC-CCcCCCCCCCceE
Q 014936 265 MFRKPKVVERMKKYFD-ILGDPATFIQAAVPSILQQPD-EVFFKKTLNLLKQSVDICYNKIKE-IP-CISCPHKPEGSMA 340 (415)
Q Consensus 265 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~a~~~~l~~~~-~~~~~~~~~~~~~~~~~l~~~l~~-~~-~~~~~~~p~~g~~ 340 (415)
++++.+..... .+.+++++.|.++.++|+... ++++++.++.++++++.+.+.|++ +| ++. +..|.+|+|
T Consensus 305 -----~l~~~l~~~~~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~g~~-~~~p~~g~~ 378 (448)
T 3aow_A 305 -----GIIRKMEIAKQSTDLCTNVFGQVVAWRYVDGGYLEKHIPEIRKFYKPRRDAMLEALEEFMPEGVK-WTKPEGGMF 378 (448)
T ss_dssp -----HHHHHHHHHHHHHHSSCCHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCE-ECCCSBSSE
T ss_pred -----HHHHHHHHHHHHhcCCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeE-EeCCCccEE
Confidence 67777766532 345678899999999997642 477888899999999999999986 67 577 447889999
Q ss_pred EEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCC----CCeEEEEeeC-ChhhHHHHHHHHHHHHHHHH
Q 014936 341 VMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGL----KNWLRVTFAV-DPYSLEECLDRIKSFYQRHA 409 (415)
Q Consensus 341 ~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~----~~~iRi~~~~-~~~~l~~~l~~l~~~~~~~~ 409 (415)
+|++++.. .+..+++..++++ ||.+.||..|+. ++++|++++. +++++++++++|.+++++..
T Consensus 379 ~~v~~~~~-----~~~~~l~~~l~~~-gV~v~pg~~f~~~~~~~~~iRls~~~~~~e~i~~~~~~L~~~l~~~~ 446 (448)
T 3aow_A 379 IWVTLPDG-----IDSKKMLERAIKK-GVAYVPGEAFYAHRDVKNTMRLNFTYVDEDKIMEGIKRLAETIKEEL 446 (448)
T ss_dssp EEEECSTT-----CCHHHHHHHHHHT-TEECEEGGGGSTTCCCCSEEEEECSSSCTHHHHHHHHHHHHHHHHHH
T ss_pred EEEEcCCC-----CCHHHHHHHHHHC-CcEEEcchhhcCCCCCCCEEEEEeCCCCHHHHHHHHHHHHHHHHHHH
Confidence 99999642 2567777777655 999999988853 5799999975 78999999999999987654
No 11
>3b46_A Aminotransferase BNA3; kynurenine aminotransferase, LLP, PLP, cytoplasm, mitochondrion, pyridoxal phosphate; HET: LLP; 2.00A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.8e-49 Score=379.77 Aligned_cols=356 Identities=24% Similarity=0.384 Sum_probs=299.9
Q ss_pred cCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHH
Q 014936 33 NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQA 112 (415)
Q Consensus 33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~a 112 (415)
.++++|||+.|.|+ +++++.+.+++.+++.......|++..|.+++|+++++++.+.+|.++++++|++|+|++++
T Consensus 55 ~~~~~i~l~~g~~~----~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~G~~~a 130 (447)
T 3b46_A 55 QGRELINLGQGFFS----YSPPQFAIKEAQKALDIPMVNQYSPTRGRPSLINSLIKLYSPIYNTELKAENVTVTTGANEG 130 (447)
T ss_dssp TTSCCEECCCCSCS----SCCCHHHHHHHHHHTTSGGGGSCCCTTCCHHHHHHHHHHHTTTTTSCCCGGGEEEESHHHHH
T ss_pred cCCCeEEccCCCCC----CCCCHHHHHHHHHHHhCcCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCChhhEEEeCCHHHH
Confidence 46789999999875 56789999999998875334589888899999999999999888888888999999999999
Q ss_pred HHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCC----------CCCCChhHHHhhcCCCceEEEecCC
Q 014936 113 IDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDK----------GWEVDLDDIESLADQNTVALVIINP 182 (415)
Q Consensus 113 l~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~----------~~~~~~~~l~~~~~~~~~~v~i~~p 182 (415)
+..++.+++++||+|+++.|+|+.+...++..|.+++.++.++++ +|.+|+++|+++++++++++++++|
T Consensus 131 l~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p 210 (447)
T 3b46_A 131 ILSCLMGLLNAGDEVIVFEPFFDQYIPNIELCGGKVVYVPINPPKELDQRNTRGEEWTIDFEQFEKAITSKTKAVIINTP 210 (447)
T ss_dssp HHHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEEEECCGGGGTSCBCSTTSEECHHHHHTTCCTTEEEEEEESS
T ss_pred HHHHHHHHcCCCCEEEEeCCCchhHHHHHHHcCCEEEEEeCCCccccccccccccCcccCHHHHHHhhccCCeEEEEeCC
Confidence 999999999999999999999999999999999999999876543 5779999999999888999999999
Q ss_pred CCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCccccccc--CCCCCeEEEccCccccCCCCceEEEEEe-
Q 014936 183 GNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVF--GSTVPILTLGSLSKRWIVPGWRLGWFVT- 259 (415)
Q Consensus 183 ~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~--~~~~~~i~~~s~sK~~~~~G~r~G~~~~- 259 (415)
+||||.++|.+++++|+++|++||+++|+||+|.++.+++ ...++..+ +..++++++.|+||.|+++|+|+||+++
T Consensus 211 ~nptG~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~~g-~~~~~~~~~~~~~~~~i~i~S~sK~~~~~G~riG~~~~~ 289 (447)
T 3b46_A 211 HNPIGKVFTREELTTLGNICVKHNVVIISDEVYEHLYFTD-SFTRIATLSPEIGQLTLTVGSAGKSFAATGWRIGWVLSL 289 (447)
T ss_dssp CTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSS-CCCCGGGSCHHHHTTEEEEEEHHHHTTCTTSCCEEEECS
T ss_pred CCCCCcccCHHHHHHHHHHHHHcCcEEEEeccchhcccCC-CCcCHHHcCCCCCCcEEEEecCchhcCCcchhhEEEEeC
Confidence 9999999999999999999999999999999999998876 33344444 1235789999999999999999999998
Q ss_pred eCCCCCCChHHHHHHHHhhc-cccCCchhHHHHHHHHhhCCCc-HHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCC
Q 014936 260 TDPCGMFRKPKVVERMKKYF-DILGDPATFIQAAVPSILQQPD-EVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEG 337 (415)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~a~~~~l~~~~-~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~ 337 (415)
++ ++++.+.... ...++.+++.|.++.++|+... ++++++.+++++++++.+.+.|+++ ++. +..|.+
T Consensus 290 ~~--------~l~~~l~~~~~~~~~~~~~~~~~a~~~aL~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~~~ 359 (447)
T 3b46_A 290 NA--------ELLSYAAKAHTRICFASPSPLQEACANSINDALKIGYFEKMRQEYINKFKIFTSIFDEL-GLP-YTAPEG 359 (447)
T ss_dssp CH--------HHHHHHHHHHHHHTSSCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHH-TCC-EECCSB
T ss_pred CH--------HHHHHHHHHHhhccCCCChHHHHHHHHHHhCCcchHHHHHHHHHHHHHHHHHHHHHHHC-CCe-ecCCCe
Confidence 54 6777776653 3356778889999888887532 4568889999999999999999987 777 447889
Q ss_pred ceEEEEecCccccCC----------CCCHHHHHHHHHhhcCeEEEcCCCCCC-------CCeEEEEeeCChhhHHHHHHH
Q 014936 338 SMAVMLKLNLSLLDD----------IIDDIDFCFKLAKEESVIILPGTAVGL-------KNWLRVTFAVDPYSLEECLDR 400 (415)
Q Consensus 338 g~~~~~~l~~~~~~~----------~~~~~~~~~~ll~~~gi~v~~g~~~~~-------~~~iRi~~~~~~~~l~~~l~~ 400 (415)
|+|+|++++....+. ..++.+++..+++++||.+.||+.|+. .+++||+++.+++++++++++
T Consensus 360 g~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~pg~~f~~~~~~~~~~~~iRls~~~~~e~l~~~~~~ 439 (447)
T 3b46_A 360 TYFVLVDFSKVKIPEDYPYPEEILNKGKDFRISHWLINELGVVAIPPTEFYIKEHEKAAENLLRFAVCKDDAYLENAVER 439 (447)
T ss_dssp SSEEEEECTTCCCCTTCCCCGGGSSSCHHHHHHHHHHHHTCEECBCGGGGSCGGGGGGGTTEEEEECCSCHHHHHHHHHH
T ss_pred eEEEEEecccccCccccccccccccCCCHHHHHHHHHHhCCEEEECchHhCCCCccCCCCCEEEEEEeCCHHHHHHHHHH
Confidence 999999986421110 113557777787778999999988763 589999998899999999999
Q ss_pred HHH
Q 014936 401 IKS 403 (415)
Q Consensus 401 l~~ 403 (415)
|.+
T Consensus 440 l~~ 442 (447)
T 3b46_A 440 LKL 442 (447)
T ss_dssp GGG
T ss_pred HHH
Confidence 976
No 12
>1o4s_A Aspartate aminotransferase; TM1255, structural genomics, JCS protein structure initiative, joint center for structural G transferase; HET: PLP; 1.90A {Thermotoga maritima} SCOP: c.67.1.1
Probab=100.00 E-value=2.8e-48 Score=367.40 Aligned_cols=347 Identities=27% Similarity=0.439 Sum_probs=297.2
Q ss_pred cCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHH
Q 014936 33 NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQA 112 (415)
Q Consensus 33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~a 112 (415)
.++++++|+.|.+. +++++.+.+++.+.+.... ..|++..|..++|+++++++++.+|..++++++++|+|++++
T Consensus 39 ~g~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~~~-~~y~~~~g~~~lr~~la~~~~~~~g~~~~~~~v~~~~g~t~a 113 (389)
T 1o4s_A 39 KGEDVINLTAGEPD----FPTPEPVVEEAVRFLQKGE-VKYTDPRGIYELREGIAKRIGERYKKDISPDQVVVTNGAKQA 113 (389)
T ss_dssp TTCCCEECCCSSCS----SCCCHHHHHHHHHHHTTCC-CCCCCTTCCHHHHHHHHHHHHHHHTCCCCGGGEEEESHHHHH
T ss_pred cCCCEEEccCCCCC----CCCCHHHHHHHHHHHhcCC-CCCCCCCCCHHHHHHHHHHHHHHhCCCCCHHHEEEecCHHHH
Confidence 36789999999864 5567999999999887543 478887899999999999998877877788999999999999
Q ss_pred HHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCH
Q 014936 113 IDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSY 192 (415)
Q Consensus 113 l~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~ 192 (415)
+..++.++.++||+|+++.|+|+++...++..|.++..++.++++++.+|+++|+++++++++++++++|+||||.++|.
T Consensus 114 l~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~p~nptG~~~~~ 193 (389)
T 1o4s_A 114 LFNAFMALLDPGDEVIVFSPVWVSYIPQIILAGGTVNVVETFMSKNFQPSLEEVEGLLVGKTKAVLINSPNNPTGVVYRR 193 (389)
T ss_dssp HHHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECCGGGTTCCCHHHHHHTCCTTEEEEEEESSCTTTCCCCCH
T ss_pred HHHHHHHhCCCCCEEEEcCCCchhHHHHHHHcCCEEEEEecCCccCCCCCHHHHHHhcccCceEEEEcCCCCCCCCCCCH
Confidence 99999999999999999999999999999999999999998654567889999999998889999999999999999999
Q ss_pred HHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCC-CCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHH
Q 014936 193 QHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS-TVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKV 271 (415)
Q Consensus 193 ~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~ 271 (415)
+++++|+++|+++|+++|+||+|+.+.+++ ...++..+.. .+++++++|+||.|+++|+|+||+++++ ++
T Consensus 194 ~~l~~l~~~~~~~~~~li~Dea~~~~~~~g-~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~l~~~~--------~~ 264 (389)
T 1o4s_A 194 EFLEGLVRLAKKRNFYIISDEVYDSLVYTD-EFTSILDVSEGFDRIVYINGFSKSHSMTGWRVGYLISSE--------KV 264 (389)
T ss_dssp HHHHHHHHHHHHHTCEEEEECTTTTSBCSS-CCCCHHHHCSSSTTEEEEEESTTTTTCGGGCCEEEECCH--------HH
T ss_pred HHHHHHHHHHHHcCCEEEEEccccccccCC-CCCCHhhcCCCCCcEEEEeechhhcCCcccceEEEEeCH--------HH
Confidence 999999999999999999999999988765 2334444432 4568999999999988999999999865 67
Q ss_pred HHHHHhhcc-ccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCcccc
Q 014936 272 VERMKKYFD-ILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLL 350 (415)
Q Consensus 272 ~~~~~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~ 350 (415)
++.+..... .+.+++++.+.++.++|+.. +++.+++++++++++.+.|+++ ++. +..|.+++++|++++
T Consensus 265 ~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~----~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~~~~~~~~~~~~---- 334 (389)
T 1o4s_A 265 ATAVSKIQSHTTSCINTVAQYAALKALEVD----NSYMVQTFKERKNFVVERLKKM-GVK-FVEPEGAFYLFFKVR---- 334 (389)
T ss_dssp HHHHHHHHHHHTCSCCHHHHHHHHHHTTCC----CHHHHHHHHHHHHHHHHHHHHT-TCC-CCCCSBSSEEEEECS----
T ss_pred HHHHHHHhhhcccCCCHHHHHHHHHHHhcc----HHHHHHHHHHHHHHHHHHHHhc-CCe-eecCCcceEEEEeCC----
Confidence 777766532 34567888999998898763 6788889999999999999988 777 446788899998885
Q ss_pred CCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEeeCChhhHHHHHHHHHHHHH
Q 014936 351 DDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFAVDPYSLEECLDRIKSFYQ 406 (415)
Q Consensus 351 ~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~~~l~~~l~~l~~~~~ 406 (415)
.+..++...+++++||.+.||..|+.++++|++++.+++++++++++|.++++
T Consensus 335 ---~~~~~l~~~l~~~~gi~v~~g~~f~~~~~~Ris~~~~~~~l~~~l~~l~~~l~ 387 (389)
T 1o4s_A 335 ---GDDVKFCERLLEEKKVALVPGSAFLKPGFVRLSFATSIERLTEALDRIEDFLN 387 (389)
T ss_dssp ---SCHHHHHHHHHHHHCEECEEGGGGTCTTEEEEECCSCHHHHHHHHHHHHHHHT
T ss_pred ---CCHHHHHHHHHHHCCEEEeCchhcCCCCeEEEEEeCCHHHHHHHHHHHHHHHh
Confidence 14677778776578999999998887789999998899999999999998764
No 13
>3jtx_A Aminotransferase; NP_283882.1, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; HET: LLP MES; 1.91A {Neisseria meningitidis Z2491}
Probab=100.00 E-value=2.6e-48 Score=368.60 Aligned_cols=348 Identities=22% Similarity=0.350 Sum_probs=297.6
Q ss_pred ccCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCC-CCCC-cEEEeCCh
Q 014936 32 KNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYK-LTPN-DVFVTSGC 109 (415)
Q Consensus 32 ~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~-~~~~-~i~i~~g~ 109 (415)
..++++|||+.|++. +++++.+++++.+.+. ....|++..|..++|+++++++++.+|.. ++++ +|++|+|+
T Consensus 27 ~~g~~~i~l~~~~~~----~~~~~~v~~a~~~~~~--~~~~y~~~~g~~~lr~~la~~l~~~~g~~~~~~~~~i~~t~g~ 100 (396)
T 3jtx_A 27 PEGMEAVPLHIGEPK----HPTPKVITDALTASLH--ELEKYPLTAGLPELRQACANWLKRRYDGLTVDADNEILPVLGS 100 (396)
T ss_dssp CTTCCCEECSCCSCC----SCCCHHHHHHHHHTGG--GGGSCCCTTCCHHHHHHHHHHHHHHTTTCCCCTTTSEEEESSH
T ss_pred ccCCCeEEeCCcCCC----CCCCHHHHHHHHHHhh--hccCCCCCCCcHHHHHHHHHHHHHhcCCCCCCCCCeEEEcCCc
Confidence 357899999999964 6678999999998875 34589988899999999999999888876 7888 99999999
Q ss_pred HHHHHHHHHHhcCCC-----CEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCC
Q 014936 110 TQAIDVAMALLSRPG-----ANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGN 184 (415)
Q Consensus 110 ~~al~~~~~~l~~~g-----d~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~n 184 (415)
++++.+++.++.++| |+|+++.|+|+.+...++..|.++..++. .++++.+|+++|+++++++++++++++|+|
T Consensus 101 ~~al~~~~~~~~~~g~~~~~d~vl~~~p~~~~~~~~~~~~g~~~~~v~~-~~~g~~~d~~~l~~~~~~~~~~v~l~~p~n 179 (396)
T 3jtx_A 101 REALFSFVQTVLNPVSDGIKPAIVSPNPFYQIYEGATLLGGGEIHFANC-PAPSFNPDWRSISEEVWKRTKLVFVCSPNN 179 (396)
T ss_dssp HHHHHHHHHHHCCC---CCCCEEEEEESCCHHHHHHHHHTTCEEEEEEC-CTTTCCCCGGGSCHHHHHTEEEEEEESSCT
T ss_pred HHHHHHHHHHHhCCCCccCCCEEEEcCCCcHhHHHHHHHcCCEEEEeec-CCCCCccCHHHHHHhhccCcEEEEEECCCC
Confidence 999999999999997 79999999999999999999999999998 445677899999998888899999999999
Q ss_pred ccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccc----cC-CCCCeEEEccCccccCCCCceEEEEEe
Q 014936 185 PCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGV----FG-STVPILTLGSLSKRWIVPGWRLGWFVT 259 (415)
Q Consensus 185 ptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~----~~-~~~~~i~~~s~sK~~~~~G~r~G~~~~ 259 (415)
|||.+++.+++++|+++|+++|+++|+||+|+++.+++........ +. ..++++++.|+||.|+++|+|+||+++
T Consensus 180 ptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~ 259 (396)
T 3jtx_A 180 PSGSVLDLDGWKEVFDLQDKYGFIIASDECYSEIYFDGNKPLGCLQAAAQLGRSRQKLLMFTSLSKRSNVPGLRSGFVAG 259 (396)
T ss_dssp TTCCCCCHHHHHHHHHHHHHHCCEEEEECTTTTCCSTTCCCCCHHHHHHHTTCCCTTEEEEEESTTTSSCGGGCCEEEEE
T ss_pred CCCCcCCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCchHHhhhhhcccccCcEEEEeccccccCCcccceEEEEe
Confidence 9999999999999999999999999999999998887632222211 11 246789999999999999999999988
Q ss_pred eCCCCCCChHHHHHHHHhhc-cccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCc
Q 014936 260 TDPCGMFRKPKVVERMKKYF-DILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGS 338 (415)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g 338 (415)
++ ++++.+.... ..+++++++.|.++..+|+. .+++++.+++++++++.+.+.|+++ +. +..|.+|
T Consensus 260 ~~--------~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~--~~~~~~~~~~~~~~~~~l~~~l~~~--~~-~~~~~~~ 326 (396)
T 3jtx_A 260 DA--------ELLKNFLLYRTYHGSAMSIPVQRASIAAWDD--EQHVIDNRRLYQEKFERVIPILQQV--FD-VKLPDAS 326 (396)
T ss_dssp CH--------HHHHHHHHHHHHHTCCCCHHHHHHHHHHHHC--CHHHHHHHHHHHHHHHHHHHHHTTT--SC-CCCCSSS
T ss_pred CH--------HHHHHHHHHHhhcccCCCHHHHHHHHHHhCC--HHHHHHHHHHHHHHHHHHHHHHHhc--CC-ccCCCee
Confidence 54 6778777653 33567889999999999875 4788999999999999999999876 33 3378889
Q ss_pred eEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCC--------CCeEEEEeeCChhhHHHHHHHHHHHH
Q 014936 339 MAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGL--------KNWLRVTFAVDPYSLEECLDRIKSFY 405 (415)
Q Consensus 339 ~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~--------~~~iRi~~~~~~~~l~~~l~~l~~~~ 405 (415)
+|+|++++. .+..++...+++++||.+.||..|+. .+++||+++.+++++++++++|++++
T Consensus 327 ~~~~~~~~~------~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~~~~~~~iRis~~~~~~~i~~~l~~l~~~l 395 (396)
T 3jtx_A 327 FYIWLKVPD------GDDLAFARNLWQKAAIQVLPGRFLARDTEQGNPGEGYVRIALVADVATCVKAAEDIVSLY 395 (396)
T ss_dssp SEEEEECTT------SCHHHHHHHHHHHHCEECEEGGGGCCCCTTCCTTTTEEEEECCSCHHHHHHHHHHHHHHC
T ss_pred EEEEEECCC------CCHHHHHHHHHHHCCEEEeCChHhCCcccccCCCCCeEEEEEcCCHHHHHHHHHHHHHHh
Confidence 999999874 25678888887888999999998874 47999999889999999999998764
No 14
>3e2y_A Kynurenine-oxoglutarate transaminase 3; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: GLN PMP; 2.26A {Mus musculus} SCOP: c.67.1.0 PDB: 2zjg_A* 3e2f_A* 3e2z_A*
Probab=100.00 E-value=1.1e-48 Score=372.79 Aligned_cols=356 Identities=22% Similarity=0.371 Sum_probs=304.0
Q ss_pred cCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCC-CcEEEeCChHH
Q 014936 33 NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTP-NDVFVTSGCTQ 111 (415)
Q Consensus 33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~-~~i~i~~g~~~ 111 (415)
.+.++|+|+.|+|+ +++++.+++++.+.+.......|++..|..++|+++++++++.+|..+++ ++|++|+|+++
T Consensus 21 ~~~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~la~~~~~~~~~~~~~~~~i~~~~g~~~ 96 (410)
T 3e2y_A 21 ADPSVVNLGQGFPD----ISPPSYVKEELSKAAFIDNMNQYTRGFGHPALVKALSCLYGKIYQRQIDPNEEILVAVGAYG 96 (410)
T ss_dssp TSTTSEECSSCCCC----SCCCHHHHHHHHHHHTCGGGGSCCCTTCCHHHHHHHHHHHHHHHTSCCCTTTSEEEESHHHH
T ss_pred cCCCeEEecCCCCC----CCCCHHHHHHHHHHHhCccccCCCCCCChHHHHHHHHHHHHHHhCCCCCCCCCEEEeCCcHH
Confidence 35789999999965 77889999999999876555689988899999999999999888888888 89999999999
Q ss_pred HHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccC---------CCCCCCChhHHHhhcCCCceEEEecCC
Q 014936 112 AIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLP---------DKGWEVDLDDIESLADQNTVALVIINP 182 (415)
Q Consensus 112 al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~---------~~~~~~~~~~l~~~~~~~~~~v~i~~p 182 (415)
++..++.+++++||+|+++.|+|+.+...++..|.++..+++++ ..++.+|++++++++++++++|++++|
T Consensus 97 a~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~~~d~~~l~~~~~~~~~~v~~~~p 176 (410)
T 3e2y_A 97 SLFNSIQGLVDPGDEVIIMVPFYDCYEPMVRMAGAVPVFIPLRSKPTDGMKWTSSDWTFDPRELESKFSSKTKAIILNTP 176 (410)
T ss_dssp HHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECEECCCCSSCCBGGGEECCHHHHHTTCCTTEEEEEEESS
T ss_pred HHHHHHHHhcCCCCEEEEeCCCchhhHHHHHHcCCEEEEEeccccccccccccccCCcCCHHHHHhhcCCCceEEEEeCC
Confidence 99999999999999999999999999999999999999998763 234668999999999888999999999
Q ss_pred CCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCC-CCCeEEEccCccccCCCCceEEEEEeeC
Q 014936 183 GNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS-TVPILTLGSLSKRWIVPGWRLGWFVTTD 261 (415)
Q Consensus 183 ~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~~~~G~r~G~~~~~~ 261 (415)
+||||.+++.+++++|+++|+++|+++|+||+|+++.+++....++..+.. .++++++.|+||.|+++|+|+||+++++
T Consensus 177 ~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~g~~G~r~G~~~~~~ 256 (410)
T 3e2y_A 177 HNPLGKVYTRQELQVIADLCVKHDTLCISDEVYEWLVYTGHTHVKIATLPGMWERTITIGSAGKTFSVTGWKLGWSIGPA 256 (410)
T ss_dssp CTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTTCGGGEEEEEEHHHHSSCGGGCCEEEECCH
T ss_pred CCCCCcCcCHHHHHHHHHHHHHcCcEEEEEhhhhhcccCCCCCCCHHHcCCccCeEEEEecchhhcCCCCceEEEEEECH
Confidence 999999999999999999999999999999999999988766656655542 3678999999999999999999999865
Q ss_pred CCCCCChHHHHHHHHhhc-cccCCchhHHHHHHHHhhCC------CcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCC
Q 014936 262 PCGMFRKPKVVERMKKYF-DILGDPATFIQAAVPSILQQ------PDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHK 334 (415)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~a~~~~l~~------~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~ 334 (415)
++++.+.... ..+++++++.+.++..+|+. ....++++.+++++++++.+.+.|+++ ++. +..
T Consensus 257 --------~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~ 326 (410)
T 3e2y_A 257 --------HLIKHLQTVQQNSFYTCATPLQAALAEAFWIDIKRMDDPECYFNSLPKELEVKRDRMVRLLNSV-GLK-PIV 326 (410)
T ss_dssp --------HHHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHTTTTSTTSHHHHHHHHHHHHHHHHHHHHHTT-TCE-EEB
T ss_pred --------HHHHHHHHHHHhhccCCChHHHHHHHHHHHhhhccccchHHHHHHHHHHHHHHHHHHHHHHHHC-CCe-ecC
Confidence 6777776653 33567788999999888862 224678899999999999999999998 787 458
Q ss_pred CCCceEEEEecCccccCCC-------CCHHHHHHHHHhhcCeEEEcCCCCCC-------CCeEEEEeeCChhhHHHHHHH
Q 014936 335 PEGSMAVMLKLNLSLLDDI-------IDDIDFCFKLAKEESVIILPGTAVGL-------KNWLRVTFAVDPYSLEECLDR 400 (415)
Q Consensus 335 p~~g~~~~~~l~~~~~~~~-------~~~~~~~~~ll~~~gi~v~~g~~~~~-------~~~iRi~~~~~~~~l~~~l~~ 400 (415)
|.+|+|+|+++..... +. .++.+++..+++++||.+.||+.|+. .+++||+++.+++++++++++
T Consensus 327 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~f~~~~~~~~~~~~iRis~~~~~e~l~~~l~~ 405 (410)
T 3e2y_A 327 PDGGYFIIADVSSLGA-DLSDMNSDEPYDYKFVKWMTKHKKLTAIPVSAFCDSKSKPHFEKLVRFCFIKKDSTLDAAEEI 405 (410)
T ss_dssp CSBSSEEEEECGGGCC-CCTTCCSSCCHHHHHHHHHHHHHSEECEEGGGGSCTTTHHHHTTEEEEECCCCHHHHHHHHHH
T ss_pred CCccEEEEEEchhhhc-ccccccccccCHHHHHHHHHHHcCEEEeCchhhCCCCCCCCCCCEEEEEEcCCHHHHHHHHHH
Confidence 8999999998854211 01 11347778888888999999998863 489999999999999999999
Q ss_pred HHH
Q 014936 401 IKS 403 (415)
Q Consensus 401 l~~ 403 (415)
|++
T Consensus 406 l~~ 408 (410)
T 3e2y_A 406 FRA 408 (410)
T ss_dssp HHT
T ss_pred HHh
Confidence 875
No 15
>1u08_A Hypothetical aminotransferase YBDL; alpha beta protein; HET: PLP; 2.35A {Escherichia coli} SCOP: c.67.1.1
Probab=100.00 E-value=7.9e-48 Score=364.06 Aligned_cols=349 Identities=23% Similarity=0.391 Sum_probs=296.6
Q ss_pred cceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCC-cEEEeCChHHHH
Q 014936 35 KKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPN-DVFVTSGCTQAI 113 (415)
Q Consensus 35 ~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~-~i~i~~g~~~al 113 (415)
.++++|+.|.++ +++++.+.+++.+.+... ...|++..|..++|+++++++.+.+|.+++++ +|++|+|+++++
T Consensus 30 ~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~~-~~~y~~~~g~~~l~~~la~~l~~~~g~~~~~~~~v~~~~g~~~a~ 104 (386)
T 1u08_A 30 HQAINLSQGFPD----FDGPRYLQERLAHHVAQG-ANQYAPMTGVQALREAIAQKTERLYGYQPDADSDITVTAGATEAL 104 (386)
T ss_dssp TTCEECCCSSCS----SCCCHHHHHHHHHHHHTT-CCSCCCTTCCHHHHHHHHHHHHHHHSCCCCTTTTEEEESSHHHHH
T ss_pred CCeEEecCCCCC----CCCCHHHHHHHHHHHHhh-ccCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCEEEcCChHHHH
Confidence 468999999864 557899999999988753 35788878899999999999988778778898 999999999999
Q ss_pred HHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHH
Q 014936 114 DVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQ 193 (415)
Q Consensus 114 ~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~ 193 (415)
..++.++.++||+|+++.|+|+.+...++..|.++..++.+++ ++.+|+++|+++++++++++++++|+||||.++|.+
T Consensus 105 ~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~-~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~ 183 (386)
T 1u08_A 105 YAAITALVRNGDEVICFDPSYDSYAPAIALSGGIVKRMALQPP-HFRVDWQEFAALLSERTRLVILNTPHNPSATVWQQA 183 (386)
T ss_dssp HHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECCTT-TCCCCHHHHHHHCCTTEEEEEEESSCTTTCCCCCHH
T ss_pred HHHHHHhCCCCCEEEEeCCCchhHHHHHHHcCCEEEEeecCcc-cCcCCHHHHHHhhcccCEEEEEeCCCCCCCccCCHH
Confidence 9999999999999999999999999999999999999998543 467999999999988899999999999999999999
Q ss_pred HHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccC-CCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHH
Q 014936 194 HLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFG-STVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVV 272 (415)
Q Consensus 194 ~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~-~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~ 272 (415)
++++|+++|+++|+++|+||+|+.+.+++....++..+. ..++++++.|+||.|+++|+|+||+++++ +++
T Consensus 184 ~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~--------~~~ 255 (386)
T 1u08_A 184 DFAALWQAIAGHEIFVISDEVYEHINFSQQGHASVLAHPQLRERAVAVSSFGKTYHMTGWKVGYCVAPA--------PIS 255 (386)
T ss_dssp HHHHHHHHHTTSCCEEEEECTTTTCBCCSSCCCCGGGSHHHHTTEEEEEEHHHHTTCGGGCCEEEECCH--------HHH
T ss_pred HHHHHHHHHHHcCcEEEEEccccccccCCCCCcChhcccCccCcEEEEecchhhcCCcccceEEEEcCH--------HHH
Confidence 999999999999999999999999988766555554442 23568999999999988999999999865 677
Q ss_pred HHHHhhcc-ccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCccccC
Q 014936 273 ERMKKYFD-ILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLD 351 (415)
Q Consensus 273 ~~~~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~~ 351 (415)
+.+..... ..++.+++.|.++..+|+.. ++++++.+++++++++.+.+.|+++ ++. +..|.+|+|+|++++...
T Consensus 256 ~~l~~~~~~~~~~~~~~~~~a~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~~~g~~~~~~~~~~~-- 330 (386)
T 1u08_A 256 AEIRKVHQYLTFSVNTPAQLALADMLRAE-PEHYLALPDFYRQKRDILVNALNES-RLE-ILPCEGTYFLLVDYSAVS-- 330 (386)
T ss_dssp HHHHHHHHHHTSSCCHHHHHHHHHHHHHC-THHHHTHHHHHHHHHHHHHHHTTSS-SCE-ECCCCBSSEEEEECTTTC--
T ss_pred HHHHHHHHhhccCCChHHHHHHHHHHhCC-cHHHHHHHHHHHHHHHHHHHHHHHC-CCe-ecCCCceEEEEEecCCCC--
Confidence 77766532 34667888888888888754 5788899999999999999999988 777 446778899999886420
Q ss_pred CCCCHHHHHHHHHhhcCeEEEcCCCCC----CCCeEEEEeeCChhhHHHHHHHHHH
Q 014936 352 DIIDDIDFCFKLAKEESVIILPGTAVG----LKNWLRVTFAVDPYSLEECLDRIKS 403 (415)
Q Consensus 352 ~~~~~~~~~~~ll~~~gi~v~~g~~~~----~~~~iRi~~~~~~~~l~~~l~~l~~ 403 (415)
..+..++...+++++||.+.||..|+ .++++||+++.+++++++++++|++
T Consensus 331 -~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~~~iRis~~~~~~~i~~~~~~l~~ 385 (386)
T 1u08_A 331 -TLDDVEFCQWLTQEHGVAAIPLSVFCADPFPHKLIRLCFAKKESTLLAAAERLRQ 385 (386)
T ss_dssp -CSCHHHHHHHHHHHSCEECEEGGGGCSSCCCSCEEEEECCSCHHHHHHHHHHHTT
T ss_pred -CCCHHHHHHHHHHhCCEEEeCchHhCCCCCCCCEEEEEEcCCHHHHHHHHHHHhh
Confidence 01466777778777899999998775 3679999998899999999999864
No 16
>2o1b_A Aminotransferase, class I; aminotrasferase; HET: PLP; 1.95A {Staphylococcus aureus}
Probab=100.00 E-value=5.4e-49 Score=373.98 Aligned_cols=352 Identities=20% Similarity=0.299 Sum_probs=297.5
Q ss_pred CcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCC-CcEEEeCChHHH
Q 014936 34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTP-NDVFVTSGCTQA 112 (415)
Q Consensus 34 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~-~~i~i~~g~~~a 112 (415)
+++++||+.|.+. +++++.+++++.+.+.......|++..|..++|+++++++.+.+|..+++ ++|++|+|++++
T Consensus 46 g~~~idl~~g~~~----~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~~v~~t~G~~~a 121 (404)
T 2o1b_A 46 PLPLINMAVGIPD----GPTPQGIIDHFQKALTIPENQKYGAFHGKEAFKQAIVDFYQRQYNVTLDKEDEVCILYGTKNG 121 (404)
T ss_dssp SSCCEECCCCSCS----SCCCHHHHHHHHHHTTCHHHHSCCCTTCCHHHHHHHHHHHHHHHCCCCCTTTSEEEESSHHHH
T ss_pred CCCEEecCCcCCC----CCCCHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCcccEEEcCCcHHH
Confidence 5678999999874 55679999999998764334478887899999999999998877877776 799999999999
Q ss_pred HHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCH
Q 014936 113 IDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSY 192 (415)
Q Consensus 113 l~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~ 192 (415)
+.+++.++.++||+|+++.|+|+++...++..|.+++.++.++ +++.+|+++|+++++++++++++++|+||||.++|.
T Consensus 122 l~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~-~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~ 200 (404)
T 2o1b_A 122 LVAVPTCVINPGDYVLLPDPGYTDYLAGVLLADGKPVPLNLEP-PHYLPDWSKVDSQIIDKTKLIYLTYPNNPTGSTATK 200 (404)
T ss_dssp HHHHHHHHCCTTCEEEEEESCCSSHHHHHHHTTCEEEEEECCT-TTCCCCGGGSCHHHHHHEEEEEECSSCTTTCCCCCH
T ss_pred HHHHHHHhcCCCCEEEEcCCCchhHHHHHHHCCCEEEEeccCc-ccCcCCHHHHHHhhccCceEEEEcCCCCCCCccCCH
Confidence 9999999999999999999999999999999999999999865 456789999998887778999999999999999999
Q ss_pred HHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccC-CCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHH
Q 014936 193 QHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFG-STVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKV 271 (415)
Q Consensus 193 ~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~-~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~ 271 (415)
+++++|+++|+++|+++|+||+|..+.+++ ...++..+. ..++++++.|+||.|+++|+|+||+++++ ++
T Consensus 201 ~~l~~l~~~~~~~~~~li~De~~~~~~~~g-~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~--------~~ 271 (404)
T 2o1b_A 201 EVFDEAIAKFKGTDTKIVHDFAYGAFGFDA-KNPSILASENGKDVAIEIYSLSKGYNMSGFRVGFAVGNK--------DM 271 (404)
T ss_dssp HHHHHHHHHHTTSSCEEEEECTTTTCBSSS-CCCCGGGSTTHHHHEEEEEESTTTTTCGGGCCEEEEECH--------HH
T ss_pred HHHHHHHHHHHHcCCEEEEEccchhcccCC-CCCChhhcCCCCCCEEEEEecchhccCchhheEeEecCH--------HH
Confidence 999999999999999999999999988765 233333332 22467999999999988999999999854 67
Q ss_pred HHHHHhhcc-ccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCcccc
Q 014936 272 VERMKKYFD-ILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLL 350 (415)
Q Consensus 272 ~~~~~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~ 350 (415)
++.+..... .+.+++++.|.++.++|+.. +.++++.+++++++++.+.+.|+++ ++. +..|.+|+|+|++++..
T Consensus 272 ~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~~~g~~~~~~~~~~-- 346 (404)
T 2o1b_A 272 IQALKKYQTHTNAGMFGALQDAAIYALNHY-DDFLEEQSNVFKTRRDRFEAMLAKA-DLP-FVHAKGGIYVWLETPPG-- 346 (404)
T ss_dssp HHHHHHHHHHHCCCCCHHHHHHHHHHHHHC-HHHHHHHHHHHHHHHHHHHHHHHHT-TCC-EECCCBSSEEEEECCTT--
T ss_pred HHHHHHHHhhccCCCCHHHHHHHHHHHhcC-HHHHHHHHHHHHHHHHHHHHHHHhc-CCe-ecCCCcceEEEEeCCCC--
Confidence 777776532 34678889999999998754 5788999999999999999999988 777 44677888999988631
Q ss_pred CCCCCHHHHHHHHHhhcCeEEEcCCCCCC--CCeEEEEeeCChhhHHHHHHHHHHHHHH
Q 014936 351 DDIIDDIDFCFKLAKEESVIILPGTAVGL--KNWLRVTFAVDPYSLEECLDRIKSFYQR 407 (415)
Q Consensus 351 ~~~~~~~~~~~~ll~~~gi~v~~g~~~~~--~~~iRi~~~~~~~~l~~~l~~l~~~~~~ 407 (415)
.+..++...+++++||.+.||..|+. ++++||+++.+++++++++++|++++++
T Consensus 347 ---~~~~~l~~~l~~~~gi~v~~g~~f~~~~~~~iRis~~~~~e~l~~~l~~l~~~l~~ 402 (404)
T 2o1b_A 347 ---YDSEQFEQFLVQEKSILVAPGKPFGENGNRYVRISLALDDQKLDEAAIRLTELAYL 402 (404)
T ss_dssp ---CCHHHHHHHHHHHHCEECEESGGGCGGGTTEEEEECCSCTTHHHHHHHHHHGGGGG
T ss_pred ---CCHHHHHHHHHHHCCEEEeCchhhCcCCCCeEEEEEcCCHHHHHHHHHHHHHHHHh
Confidence 24667788877778999999998874 6899999988889999999999887654
No 17
>3nra_A Aspartate aminotransferase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: LLP; 2.15A {Rhodobacter sphaeroides}
Probab=100.00 E-value=3.9e-48 Score=368.79 Aligned_cols=356 Identities=19% Similarity=0.260 Sum_probs=305.7
Q ss_pred ceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCC-CcEEEeCChHHHHH
Q 014936 36 KVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTP-NDVFVTSGCTQAID 114 (415)
Q Consensus 36 ~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~-~~i~i~~g~~~al~ 114 (415)
.++||+.|++. .+++++.+++++.+.+.......|++..|..++++++++++.+.+|..+++ ++|++|+|+++++.
T Consensus 40 ~~id~~~g~~~---~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~l~~~l~~~~g~~~~~~~~i~~~~g~~~a~~ 116 (407)
T 3nra_A 40 RPVDFSHGDVD---AHEPTPGAFDLFSAGVQSGGVQAYTEYRGDLGIRDLLAPRLAAFTGAPVDARDGLIITPGTQGALF 116 (407)
T ss_dssp CCEETTSCCTT---TSCCCTTHHHHHHHHHHHTHHHHSCCTTCCHHHHHHHHHHHHHHHTSCCCTTTSEEEESHHHHHHH
T ss_pred ceeeecCcCCC---CCCCcHHHHHHHHHHHhcCCCCCcCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEeCCcHHHHH
Confidence 48999999865 367889999999998875444468888899999999999999888877766 79999999999999
Q ss_pred HHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccC----CCCCCCChhHHHhhcCCCceEEEecCCCCccccCC
Q 014936 115 VAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLP----DKGWEVDLDDIESLADQNTVALVIINPGNPCGNVY 190 (415)
Q Consensus 115 ~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~----~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~ 190 (415)
.++.++.++||+|+++.|+|.++...++..|.++..+++++ ++++.+|+++|+++++++++++++++|+||||.++
T Consensus 117 ~~~~~l~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~p~nptG~~~ 196 (407)
T 3nra_A 117 LAVAATVARGDKVAIVQPDYFANRKLVEFFEGEMVPVQLDYVSADETRAGLDLTGLEEAFKAGARVFLFSNPNNPAGVVY 196 (407)
T ss_dssp HHHHTTCCTTCEEEEEESCCTHHHHHHHHTTCEEEEEEBCCCSSCCSSCCBCHHHHHHHHHTTCCEEEEESSCTTTCCCC
T ss_pred HHHHHhCCCCCEEEEcCCcccchHHHHHHcCCEEEEeecccccccCcCCCcCHHHHHHHHhhCCcEEEEcCCCCCCCccc
Confidence 99999999999999999999999999999999999999843 35677999999999988899999999999999999
Q ss_pred CHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccC--CCCCeEEEccCccccCCCCceEEEEEeeCCCCCCCh
Q 014936 191 SYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFG--STVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRK 268 (415)
Q Consensus 191 ~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~--~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~ 268 (415)
|.+++++|+++|+++|+++|+||+|+.+.+++....++..++ ..++++++.|+||.|+++|+|+||+++++
T Consensus 197 ~~~~l~~i~~~~~~~~~~li~Dea~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~------- 269 (407)
T 3nra_A 197 SAEEIGQIAALAARYGATVIADQLYSRLRYAGASYTHLRAEAAVDAENVVTIMGPSKTESLSGYRLGVAFGSR------- 269 (407)
T ss_dssp CHHHHHHHHHHHHHHTCEEEEECTTTTSBCTTCCCCCGGGCTTSCGGGEEEEECSSSTTCCGGGCCEEEEECH-------
T ss_pred CHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCCChhhcCcccCCcEEEEeCcccccCCCeeeEEEEEcCH-------
Confidence 999999999999999999999999999998877666666653 34578999999999999999999999864
Q ss_pred HHHHHHHHhhc-cccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCc
Q 014936 269 PKVVERMKKYF-DILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNL 347 (415)
Q Consensus 269 ~~~~~~~~~~~-~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~ 347 (415)
++++.+.... ..+.+++++.+.++..+|+.. ..++++.+++++++++.+.+.|+++|++. +..|.+++|+|+.++.
T Consensus 270 -~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~-~~~~~~~~~~~~~~~~ 346 (407)
T 3nra_A 270 -AIIARMEKLQAIVSLRAAGYSQAVLRGWFDEA-PGWMEDRIARHQAIRDELLHVLRGCEGVF-ARTPQAGSYLFPRLPK 346 (407)
T ss_dssp -HHHHHHHHHHHHHTSSSCHHHHGGGGGTTCCC-TTHHHHHHHHHHHHHHHHHHHHHTSTTCB-CCCCSBSSEECCBCCC
T ss_pred -HHHHHHHHHHhhhccCCChHHHHHHHHHHhcc-chHHHHHHHHHHHHHHHHHHHHhcCCCce-eccCCeeEEEEEeCCC
Confidence 6777777653 334566788888888888742 36788888999999999999999988888 4478888999998864
Q ss_pred cccCCCCCHHHHHHHHHhhcCeEEEcCCCCCC--CCeEEEEeeCChhhHHHHHHHHHHHHHHH
Q 014936 348 SLLDDIIDDIDFCFKLAKEESVIILPGTAVGL--KNWLRVTFAVDPYSLEECLDRIKSFYQRH 408 (415)
Q Consensus 348 ~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~--~~~iRi~~~~~~~~l~~~l~~l~~~~~~~ 408 (415)
.. .+..++...+++++||.+.||..|+. .+++||+++.+++++++++++|+++++++
T Consensus 347 ~~----~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRis~~~~~~~i~~~~~~l~~~~~~~ 405 (407)
T 3nra_A 347 LA----VAPAEFVKILRLQAGVVVTPGTEFSPHTADSVRLNFSQDHEAAVAAARRIVTLVERY 405 (407)
T ss_dssp BS----SCHHHHHHHHHHHHCEECEEGGGTCTTCTTBEEEECCSCHHHHHHHHHHHHHHHHHH
T ss_pred CC----CCHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHh
Confidence 21 25677778777778999999998874 68999999889999999999999998765
No 18
>2o0r_A RV0858C (N-succinyldiaminopimelate aminotransfera; PLP-binding enzyme, lysine biosynthesis, aminotransferase, S genomics; HET: LLP; 2.00A {Mycobacterium tuberculosis}
Probab=100.00 E-value=3.5e-48 Score=369.47 Aligned_cols=380 Identities=26% Similarity=0.377 Sum_probs=310.5
Q ss_pred CccccCCccCCcchhhHHHHHHHhhhcccccccCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcH
Q 014936 1 MEISNGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLP 80 (415)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~ 80 (415)
|.+|++.....++ .+..+.. . ..+.++++|+.|.++ +++++.+.+++.+.+... ...|++..|..
T Consensus 1 ~~~~~~~~~~~~~--~~~~~~~-----~---~~~~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~~-~~~y~~~~g~~ 65 (411)
T 2o0r_A 1 MATVSRLRPYATT--VFAEMSA-----L---ATRIGAVNLGQGFPD----EDGPPKMLQAAQDAIAGG-VNQYPPGPGSA 65 (411)
T ss_dssp -CCCGGGGGGSSC--HHHHHHH-----H---HHTTTCEESSCSSCS----SCCCHHHHHHHHHHHHTT-CCSCCCTTCCH
T ss_pred CchhhHhHhcCcc--HHHHHHH-----H---hhcCCeeeccCcCCC----CCCCHHHHHHHHHHHhcC-CCCCCCCCCCH
Confidence 6778887777766 3333322 1 124468999999864 556899999999998753 45898888899
Q ss_pred HHHHHHHHHHhhhCCCCCCCC-cEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCC-CC
Q 014936 81 LTRRAIAEYLSRDLPYKLTPN-DVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPD-KG 158 (415)
Q Consensus 81 ~lr~~ia~~~~~~~~~~~~~~-~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~-~~ 158 (415)
++|+++++++.+.+|.+++++ +|++|+|+++++.+++.++.++||+|+++.|+|+++...++..|.++..++.+++ ++
T Consensus 66 ~l~~~la~~~~~~~g~~~~~~~~v~~t~g~~~al~~~~~~~~~~gd~Vl~~~~~y~~~~~~~~~~g~~~~~v~~~~~~~~ 145 (411)
T 2o0r_A 66 PLRRAIAAQRRRHFGVDYDPETEVLVTVGATEAIAAAVLGLVEPGSEVLLIEPFYDSYSPVVAMAGAHRVTVPLVPDGRG 145 (411)
T ss_dssp HHHHHHHHHHHHHHCCCCCTTTSEEEEEHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECEEETTE
T ss_pred HHHHHHHHHHHHHcCCCCCCCceEEEeCCHHHHHHHHHHHhcCCCCEEEEeCCCcHhHHHHHHHcCCEEEEeeccccccC
Confidence 999999999988778778888 9999999999999999999999999999999999999999999999999987653 24
Q ss_pred CCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCC-CCCe
Q 014936 159 WEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS-TVPI 237 (415)
Q Consensus 159 ~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~-~~~~ 237 (415)
+.+|+++|++++++++++|++++|+||||.++|.+++++|+++|+++|+++|+||+|+++.+++....++..+.. .+++
T Consensus 146 ~~~d~~~l~~~l~~~~~~v~l~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~ 225 (411)
T 2o0r_A 146 FALDADALRRAVTPRTRALIINSPHNPTGAVLSATELAAIAEIAVAANLVVITDEVYEHLVFDHARHLPLAGFDGMAERT 225 (411)
T ss_dssp EECCHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTCCCCCGGGSTTTGGGE
T ss_pred CCCCHHHHHHhhccCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCcChhhccCCCCCE
Confidence 668999999999888999999999999999999999999999999999999999999999887665555555432 3568
Q ss_pred EEEccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhhcc-ccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHH
Q 014936 238 LTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFD-ILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSV 316 (415)
Q Consensus 238 i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~ 316 (415)
+++.|+||.++++|+|+||+++++ ++++.+..... .+++.+++.|.++..+|+.. ++++++.++++++++
T Consensus 226 i~~~s~sK~~~~~G~r~G~~~~~~--------~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~-~~~~~~~~~~~~~~~ 296 (411)
T 2o0r_A 226 ITISSAAKMFNCTGWKIGWACGPA--------ELIAGVRAAKQYLSYVGGAPFQPAVALALDTE-DAWVAALRNSLRARR 296 (411)
T ss_dssp EEEEEHHHHTTCTTTCEEEEECCH--------HHHHHHHHHHHHHTSCCCTTHHHHHHHHHHHC-HHHHHHHHHHHHHHH
T ss_pred EEEeechhhcCCccceEEEEeeCH--------HHHHHHHHHHhhccCCCChHHHHHHHHHHhCC-hHHHHHHHHHHHHHH
Confidence 999999999988999999999854 67777765532 34566778888888888644 577889999999999
Q ss_pred HHHHHHhhcCCCCcCCCCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCC-------------CCCeE
Q 014936 317 DICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVG-------------LKNWL 383 (415)
Q Consensus 317 ~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~-------------~~~~i 383 (415)
+++.+.|+++ ++. +..|.+|+|+|++++... + .+..++...+++++||.+.||..|. ..+++
T Consensus 297 ~~l~~~L~~~-g~~-~~~~~~g~~~~~~~~~~~--~-~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~~~~~~~~~~~~i 371 (411)
T 2o0r_A 297 DRLAAGLTEI-GFA-VHDSYGTYFLCADPRPLG--Y-DDSTEFCAALPEKVGVAAIPMSAFCDPAAGQASQQADVWNHLV 371 (411)
T ss_dssp HHHHHHHHHH-TCE-ECCCCBSSEEEEECGGGT--C-CCHHHHHHHHHHHHSEECEEGGGGSCCC--------CCGGGCE
T ss_pred HHHHHHHHHc-CCE-ecCCCeeEEEEEecCCCC--C-CCHHHHHHHHHHhCCEEEcChhhhCCCccccccccccCCCCeE
Confidence 9999999987 777 446788889999886410 0 1466777878777899999998772 24689
Q ss_pred EEEeeCChhhHHHHHHHHHHHHHHHH
Q 014936 384 RVTFAVDPYSLEECLDRIKSFYQRHA 409 (415)
Q Consensus 384 Ri~~~~~~~~l~~~l~~l~~~~~~~~ 409 (415)
||+++.+++++++++++|++++++..
T Consensus 372 Ris~~~~~e~i~~~~~~l~~~~~~~~ 397 (411)
T 2o0r_A 372 RFTFCKRDDTLDEAIRRLSVLAERPA 397 (411)
T ss_dssp EEECCSCHHHHHHHHHHHGGGGC---
T ss_pred EEEecCCHHHHHHHHHHHHHHHhccC
Confidence 99998889999999999998776543
No 19
>3tcm_A Alanine aminotransferase 2; pyridoxal phosphate (PLP)-binding; HET: DCS; 2.71A {Hordeum vulgare}
Probab=100.00 E-value=1.9e-47 Score=372.06 Aligned_cols=371 Identities=21% Similarity=0.342 Sum_probs=302.6
Q ss_pred ceeEecccCCCCCCCCC-------------------------CcHHHHHHHHHHHhcC---CCCCCCCCCCcHHHHHHHH
Q 014936 36 KVISLAMGDPTVHSCFH-------------------------TTHVATEAVAEALLSE---KFNGYAPTAGLPLTRRAIA 87 (415)
Q Consensus 36 ~~i~l~~g~~~~~~~~~-------------------------~~~~~~~a~~~~~~~~---~~~~y~~~~g~~~lr~~ia 87 (415)
.+|+..+|+|.....-+ .++.++++..+.+... ....|++..|.+++|++++
T Consensus 65 ~~i~~~iG~~~~~~~~p~~~~~~~~~~~~~p~~i~~~~~~~~~p~~~~~~a~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia 144 (500)
T 3tcm_A 65 EILYCNIGNPQSLGQQPVTFFREVLALCDHPDLLQREEIKTLFSADSISRAKQILAMIPGRATGAYSHSQGIHGLRDAIA 144 (500)
T ss_dssp SCEECSSCCGGGTTCCCCHHHHHHHHHHHSGGGGGCTTHHHHSCHHHHHHHHHHHTTSTTSCSSSCCCTTCCHHHHHHHH
T ss_pred HhhhhcCcChhhcCCCCCcHHHHHHHhhcCcccccCCCCcccCCHHHHHHHHHHHHcCCCCcCCCcCCCcChHHHHHHHH
Confidence 78999999874322211 3444666666666652 4568999999999999999
Q ss_pred HHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhc-CCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHH
Q 014936 88 EYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLS-RPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDI 166 (415)
Q Consensus 88 ~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~-~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l 166 (415)
+++.+..|..+++++|++|+|+++++..++.+++ ++||.|+++.|+|..+...++..|.+++.++.+.+++|.+|+++|
T Consensus 145 ~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l 224 (500)
T 3tcm_A 145 SGIASRDGFPANADDIFLTDGASPGVHLMMQLLIRNEKDGILVPIPQYPLYSASIALHGGALVPYYLNESTGWGLETSDV 224 (500)
T ss_dssp HHHHHHHSSCCCGGGEEEESSSHHHHHHHHHHHCCSTTEEEEEEESCCTHHHHHHHHTTCEEEEEECBTTTTSBCCHHHH
T ss_pred HHHHhhcCCCCCcccEEEcCCHHHHHHHHHHHHcCCCCCEEEEeCCCcHhHHHHHHHcCCEEEEEecccccCCCCCHHHH
Confidence 9999888888999999999999999999999998 899999999999999999999999999999998877889999999
Q ss_pred HhhcCC------CceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCC-Cccccc----cc---C
Q 014936 167 ESLADQ------NTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDK-PFVPMG----VF---G 232 (415)
Q Consensus 167 ~~~~~~------~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~-~~~~~~----~~---~ 232 (415)
++++++ +++++++++|+||||.++|.+++++|+++|+++|+++|+||+|+.+.+++. ...++. .+ .
T Consensus 225 ~~~l~~~~~~~~~~k~ivl~~p~NPtG~~~s~~~l~~i~~la~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~~~~~~ 304 (500)
T 3tcm_A 225 KKQLEDARSRGINVRALVVINPGNPTGQVLAEENQYDIVKFCKNEGLVLLADEVYQENIYVDNKKFHSFKKIVRSLGYGE 304 (500)
T ss_dssp HHHHHHHHHTTCEEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCCTTCCCCCHHHHHHHTTCSS
T ss_pred HHHHHHHHhcCCCceEEEEECCCCCCcccCCHHHHHHHHHHHHHcCCEEEEecCccccccCCCCCCCcHHHHHHHhcccc
Confidence 999876 688999999999999999999999999999999999999999999988643 344432 22 2
Q ss_pred CCCCeEEEccCcccc-CCCCceEEEEEeeCCCCCCChHHHHHHHHhhccccCCchhHHHHHHHHhhCCCc---------H
Q 014936 233 STVPILTLGSLSKRW-IVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQAAVPSILQQPD---------E 302 (415)
Q Consensus 233 ~~~~~i~~~s~sK~~-~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~---------~ 302 (415)
...++++++||||.| +++|+|+||+++... ++++++.+........+++.+.|.++..++.... .
T Consensus 305 ~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~-----~~~~~~~l~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~ 379 (500)
T 3tcm_A 305 EDLPLVSYQSVSKGYYGECGKRGGYFEITGF-----SAPVREQIYKIASVNLCSNITGQILASLVMNPPKASDESYASYK 379 (500)
T ss_dssp SCCCEEEEEESSSTTTCCGGGCCEEEEEESC-----CTTHHHHHHHHHHTTCCCCHHHHHHHHHHHSCCCSSSTHHHHHH
T ss_pred CCeEEEEEecCCccCCCCCccceEEEEEeCC-----CHHHHHHHHHHHhcccCCCHHHHHHHHHHhcCccccchhHHHHH
Confidence 334689999999998 889999999998320 1157777776655567788999999999987421 2
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCccc-------cCCCCCHHHHHHHHHhhcCeEEEcCC
Q 014936 303 VFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSL-------LDDIIDDIDFCFKLAKEESVIILPGT 375 (415)
Q Consensus 303 ~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~-------~~~~~~~~~~~~~ll~~~gi~v~~g~ 375 (415)
.++++.+++++++++.+.+.|+++|++. +..|++++|+|+++..+. ..+..++..++..+|+++||.+.||+
T Consensus 380 ~~~~~~~~~l~~~~~~l~~~L~~~~g~~-~~~~~g~~~~~~~~~lp~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pg~ 458 (500)
T 3tcm_A 380 AEKDGILASLARRAKALEHAFNKLEGIT-CNEAEGAMYVFPQICLPQKAIEAAKAANKAPDAFYALRLLESTGIVVVPGS 458 (500)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTSTTEE-CCCCCBTTEECCEECCCHHHHHHHHHHTSCHHHHHHHHHHHHHCEECEEST
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCcE-EecCCeEEEEeeeecCchhhHHHHHhcCCCcHHHHHHHHHHHCCEEEEeCc
Confidence 4567778899999999999999998998 458899999996553210 00122244456788888999999999
Q ss_pred CCCC---CCeEEEEeeCChhhHHHHHHHHHHHHHHHHHHh
Q 014936 376 AVGL---KNWLRVTFAVDPYSLEECLDRIKSFYQRHAKQL 412 (415)
Q Consensus 376 ~~~~---~~~iRi~~~~~~~~l~~~l~~l~~~~~~~~~~~ 412 (415)
.|+. .++||++++.+++++++++++|+++++++.++.
T Consensus 459 ~f~~~~g~~~iRis~~~~~e~i~~~i~~l~~~~~~~~~~~ 498 (500)
T 3tcm_A 459 GFGQVPGTWHFRCTILPQEDKIPAVISRFTVFHEAFMSEY 498 (500)
T ss_dssp TTCCCTTCCBEEEESCSCTTTHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHh
Confidence 9985 458999999889999999999999999887764
No 20
>1xi9_A Putative transaminase; alanine aminotransferase, southeast collaboratory for structural genomics, secsg; HET: PLP; 2.33A {Pyrococcus furiosus} SCOP: c.67.1.1
Probab=100.00 E-value=4.4e-48 Score=368.20 Aligned_cols=364 Identities=29% Similarity=0.494 Sum_probs=301.8
Q ss_pred cCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHH
Q 014936 33 NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQA 112 (415)
Q Consensus 33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~a 112 (415)
.++++++|+.|.|... .+++++.+.+++.+.+.... ..|++..|..++|+++++++++.+|.++++++|++|+|++++
T Consensus 36 ~g~~~i~l~~~~~~~~-~~~~~~~v~~a~~~~~~~~~-~~y~~~~g~~~l~~~la~~l~~~~g~~~~~~~v~~t~g~~~a 113 (406)
T 1xi9_A 36 KGIKVIRLNIGDPVKF-DFQPPEHMKEAYCKAIKEGH-NYYGDSEGLPELRKAIVEREKRKNGVDITPDDVRVTAAVTEA 113 (406)
T ss_dssp TTCCCEECCCCCGGGT-TCCCCHHHHHHHHHHHHTTC-CSCCCTTCCHHHHHHHHHHHHHHHCCCCCGGGEEEESHHHHH
T ss_pred cCCCEEEecCCCCCcC-CCCCCHHHHHHHHHHHhcCC-CCCCCCCCcHHHHHHHHHHHHHhcCCCCCHHHEEEcCChHHH
Confidence 4678999999987321 25667999999999887543 478887899999999999999888888889999999999999
Q ss_pred HHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCH
Q 014936 113 IDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSY 192 (415)
Q Consensus 113 l~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~ 192 (415)
+.+++.++.++||+|+++.|+|+++...++..|.+++.++.++++++.+|++.|++.++++++++++++|+||||.++|.
T Consensus 114 l~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~v~i~~p~nptG~~~~~ 193 (406)
T 1xi9_A 114 LQLIFGALLDPGDEILVPGPSYPPYTGLVKFYGGKPVEYRTIEEEDWQPDIDDIRKKITDRTKAIAVINPNNPTGALYDK 193 (406)
T ss_dssp HHHHHHHHCCTTCEEEEEESCCHHHHHHHHHTTCEEEEEEEEGGGTSEECHHHHHHHCCTTEEEEEEESSCTTTCCCCCH
T ss_pred HHHHHHHhCCCCCEEEEcCCCCccHHHHHHHcCCEEEEeecCCCcCCcCCHHHHHHhhCcCceEEEEECCCCCCCCCcCH
Confidence 99999999999999999999999999999999999999998654567789999999998889999999999999999999
Q ss_pred HHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCC-eEEEccCccccCCCCceEEEEE--eeCCCCCCChH
Q 014936 193 QHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVP-ILTLGSLSKRWIVPGWRLGWFV--TTDPCGMFRKP 269 (415)
Q Consensus 193 ~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~-~i~~~s~sK~~~~~G~r~G~~~--~~~~~~~~~~~ 269 (415)
+++++|+++|+++|+++|+||+|+.+.+++ ...++..++ .++ +++++|+||.++++|+|+||++ ++++. . .
T Consensus 194 ~~l~~i~~~a~~~~~~li~De~~~~~~~~~-~~~~~~~~~-~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~-~---~ 267 (406)
T 1xi9_A 194 KTLEEILNIAGEYEIPVISDEIYDLMTYEG-EHISPGSLT-KDVPVIVMNGLSKVYFATGWRLGYMYFVDPENK-L---S 267 (406)
T ss_dssp HHHHHHHHHHHHHTCCEEEECTTTTCBSSS-CCCCHHHHC-SSSCEEEEEESTTTTCCGGGCCEEEEEECTTCT-T---H
T ss_pred HHHHHHHHHHHHcCCEEEEEcCccccccCC-CCCCHHHcC-CCceEEEEeccccccCCCccEEEEEEEecCchh-H---H
Confidence 999999999999999999999999988743 333455554 456 8999999999988999999998 53210 0 0
Q ss_pred HHHHHHHhhccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCccc
Q 014936 270 KVVERMKKYFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSL 349 (415)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~ 349 (415)
++++.+.......++++++.+.++.++|+.. .+++++.+++++++++++.+.|+++|++. +..|.+|+++|++++...
T Consensus 268 ~l~~~l~~~~~~~~~~~~~~~~a~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~-~~~~~~~~~~~~~~~~~~ 345 (406)
T 1xi9_A 268 EVREAIDRLARIRLCPNTPAQFAAIAGLTGP-MDYLKEYMKKLKERRDYIYKRLNEIPGIS-TTKPQGAFYIFPKIEVGP 345 (406)
T ss_dssp HHHHHHHHHHHHTCCSCSHHHHHHHHHHHSC-CHHHHHHHHHHHHHHHHHHHHHHTSTTEE-CCCCCBSSEECCEECSCS
T ss_pred HHHHHHHHHHHhhcCCCHHHHHHHHHHHhCC-cHHHHHHHHHHHHHHHHHHHHHHhCCCCe-eecCCeeEEEEEecCccC
Confidence 4666666553322677888999999999643 35688899999999999999999988887 446788889998775310
Q ss_pred cCCCCCHHHHHHHHHhhcCeEEEcCCCCCC--CCeEEEEeeCChhhHHHHHHHHHHHHHHHH
Q 014936 350 LDDIIDDIDFCFKLAKEESVIILPGTAVGL--KNWLRVTFAVDPYSLEECLDRIKSFYQRHA 409 (415)
Q Consensus 350 ~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~--~~~iRi~~~~~~~~l~~~l~~l~~~~~~~~ 409 (415)
+ .+..++...+++++||.+.||..|+. .+++||+++.+++++++++++|+++++++.
T Consensus 346 --~-~~~~~l~~~l~~~~gi~v~~g~~f~~~~~~~lRis~~~~~~~i~~~~~~l~~~l~~~~ 404 (406)
T 1xi9_A 346 --W-KNDKEFVLDVLHNAHVLFVHGSGFGEYGAGHFRAVFLPPIEILEEAMDRFEKFMKERL 404 (406)
T ss_dssp --C-SSHHHHHHHHHHHHCEECEEGGGGCGGGTTBEEEECCSCHHHHHHHHHHHHHHHHHC-
T ss_pred --C-CCHHHHHHHHHHhCCEEEeCchhcCCCCCCEEEEEecCCHHHHHHHHHHHHHHHHHHh
Confidence 1 24667777777678999999998875 689999999899999999999999987643
No 21
>3ihj_A Alanine aminotransferase 2; helix, structural genomics, structural genomics consortium, pyridoxal phosphate; HET: PLP; 2.30A {Homo sapiens}
Probab=100.00 E-value=9.6e-48 Score=373.51 Aligned_cols=370 Identities=22% Similarity=0.392 Sum_probs=289.8
Q ss_pred ceeEecccCCCCCCCCCC----------------------cHHHHHHHHHHHhcC---CCCCCCCCCCcHHHHHHHHHHH
Q 014936 36 KVISLAMGDPTVHSCFHT----------------------THVATEAVAEALLSE---KFNGYAPTAGLPLTRRAIAEYL 90 (415)
Q Consensus 36 ~~i~l~~g~~~~~~~~~~----------------------~~~~~~a~~~~~~~~---~~~~y~~~~g~~~lr~~ia~~~ 90 (415)
+++++.+|+|.... ..+ +..+.+++.+.+... ....|++..|.+++|++|++++
T Consensus 64 ~~i~~nig~p~~~~-~~~~~~~r~~l~l~~~p~~~~~~~~P~~~~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~ 142 (498)
T 3ihj_A 64 EVIRANIGDAQAMG-QQPITFLRQVMALCTYPNLLDSPSFPEDAKKRARRILQACGGNSLGSYSASQGVNCIREDVAAYI 142 (498)
T ss_dssp SCBCCC-----------CCHHHHHHHHHHHCGGGGGCSSSCHHHHHHHHHHHHHC----------CCSCHHHHHHHHHHH
T ss_pred hhhhcCCcCccccc-CCcchHHHHHHHHhcCccccCcccCCHHHHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHH
Confidence 89999999985432 212 344455556666542 3468999999999999999999
Q ss_pred hhhCC-CCCCCCcEEEeCChHHHHHHHHHHhcCCCC----EEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhH
Q 014936 91 SRDLP-YKLTPNDVFVTSGCTQAIDVAMALLSRPGA----NILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDD 165 (415)
Q Consensus 91 ~~~~~-~~~~~~~i~i~~g~~~al~~~~~~l~~~gd----~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 165 (415)
.+.+| +.+++++|++|+|+++++..++.++.++|| .|+++.|+|+.+...++..|++++.++++++++|.+|+++
T Consensus 143 ~~~~gG~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~~~d~Vlv~~p~y~~~~~~~~~~g~~~v~~~~~~~~~~~~d~~~ 222 (498)
T 3ihj_A 143 TRRDGGVPADPDNIYLTTGASDGISTILKILVSGGGKSRTGVMIPIPQYPLYSAVISELDAIQVNYYLDEENCWALNVNE 222 (498)
T ss_dssp HHHTTTCCCCGGGEEEESSHHHHHHHHHHHHCCCCGGGSEEEEEEESCCTHHHHHHHHTTCEEEEEECBGGGTTBCCHHH
T ss_pred HHhcCCCCCCcccEEEcCCHHHHHHHHHHHHcCCCCCCCCEEEEeCCCchhHHHHHHHcCCEEEEeeccccccCCCCHHH
Confidence 98884 888999999999999999999999998875 9999999999999999999999999999887789999999
Q ss_pred HHhhcCC-----CceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCC-CcccccccC-------
Q 014936 166 IESLADQ-----NTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDK-PFVPMGVFG------- 232 (415)
Q Consensus 166 l~~~~~~-----~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~-~~~~~~~~~------- 232 (415)
|++++++ +++++++++|+||||.++|.+++++|+++|+++|+++|+||+|+.+.+++. ...++..+.
T Consensus 223 le~~l~~~~~~~~~k~i~l~np~NPTG~v~s~~~l~~i~~la~~~~~~li~De~y~~~~~~~~~~~~s~~~~~~~~~~~~ 302 (498)
T 3ihj_A 223 LRRAVQEAKDHCDPKVLCIINPGNPTGQVQSRKCIEDVIHFAWEEKLFLLADEVYQDNVYSPDCRFHSFKKVLYEMGPEY 302 (498)
T ss_dssp HHHHHHHHTTTSEEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCCTTCCCCCHHHHHHHTCHHH
T ss_pred HHHHHHhhhccCCCeEEEEECCCCCCCCcCCHHHHHHHHHHHHHcCcEEEEEcCccccccCCCCCcCCHHHHHHHhcccc
Confidence 9998876 589999999999999999999999999999999999999999999998754 444544431
Q ss_pred -CCCCeEEEccCcccc-CCCCceEEEEEeeCCCCCCChHHHHHHHHhhccccCCchhHHHHHHHHhhCCC------cH--
Q 014936 233 -STVPILTLGSLSKRW-IVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQAAVPSILQQP------DE-- 302 (415)
Q Consensus 233 -~~~~~i~~~s~sK~~-~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~------~~-- 302 (415)
...++++++||||.| +++|+|+||++... .++++++.+........+++.+.|.++..++... .+
T Consensus 303 ~~~~~~i~~~S~SK~~~G~~G~R~G~~~~~~-----~~~~l~~~l~~~~~~~~~~~~~~q~a~~~~l~~~~~g~~~~~~~ 377 (498)
T 3ihj_A 303 SSNVELASFHSTSKGYMGECGYRGGYMEVIN-----LHPEIKGQLVKLLSVRLCPPVSGQAAMDIVVNPPVAGEESFEQF 377 (498)
T ss_dssp HTTCCEEEEEESSSSTTCCSSSCCEEEEEES-----CCHHHHHHHHHHHHHSCCCCHHHHHHHHHHTCCCCTTSTTHHHH
T ss_pred cCceeEEEEeccccccccCcccceEEEEEec-----CCHHHHHHHHHHHhccCCCCHHHHHHHHHHhcCCccCcccHHHH
Confidence 234589999999999 78999999998421 0136888887765556778889999999888741 12
Q ss_pred -HHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCccc-------cCCCCCHHHHHHHHHhhcCeEEEcC
Q 014936 303 -VFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSL-------LDDIIDDIDFCFKLAKEESVIILPG 374 (415)
Q Consensus 303 -~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~-------~~~~~~~~~~~~~ll~~~gi~v~~g 374 (415)
.+.++.+++++++++.+.+.|+++|++. +..|.+|+|+|++++.+. ..+...+..++.++|+++||.+.||
T Consensus 378 ~~~~~~~~~~l~~~~~~l~~~L~~~~g~~-~~~p~gg~~~~~~l~~p~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pG 456 (498)
T 3ihj_A 378 SREKESVLGNLAKKAKLTEDLFNQVPGIH-CNPLQGAMYAFPRIFIPAKAVEAAQAHQMAPDMFYCMKLLEETGICVVPG 456 (498)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTSTTEE-CCCCCBSSEECCEECCCHHHHHHHHHTTSCHHHHHHHHHHHHHCBCCEEG
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCcE-ecCCCeEEEEEEeccCchhhhHHHHhcCCCcHHHHHHHHHHHCCEEEEeC
Confidence 2345677889999999999999998998 458899999998764210 0022123333778888899999999
Q ss_pred CCCCC---CCeEEEEeeCChhhHHHHHHHHHHHHHHHHHHh
Q 014936 375 TAVGL---KNWLRVTFAVDPYSLEECLDRIKSFYQRHAKQL 412 (415)
Q Consensus 375 ~~~~~---~~~iRi~~~~~~~~l~~~l~~l~~~~~~~~~~~ 412 (415)
+.|+. .+++|++++.+++++++++++|+++++++.++.
T Consensus 457 ~~f~~~~~~~~~Ris~~~~~e~l~~~i~~L~~~~~~~~~~~ 497 (498)
T 3ihj_A 457 SGFGQREGTYHFRMTILPPVEKLKTVLQKVKDFHINFLEKY 497 (498)
T ss_dssp GGTCCCTTCCBEEEECCSCHHHHHHHHHHHHHHHHHHHHHC
T ss_pred cccCCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHHHHh
Confidence 99985 459999999899999999999999999887653
No 22
>3fdb_A Beta C-S lyase, putative PLP-dependent beta-cystathionase; PLP-dependent transferase-like fold, structural genomics; HET: LLP; 1.99A {Corynebacterium diphtheriae}
Probab=100.00 E-value=2.8e-48 Score=365.92 Aligned_cols=350 Identities=20% Similarity=0.314 Sum_probs=302.0
Q ss_pred cCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHH
Q 014936 33 NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQA 112 (415)
Q Consensus 33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~a 112 (415)
.+++++||+.|++. +++++.+++++.+.+... ...|++ .+ .++|+.+++++++.+|..+++++|++|+|++++
T Consensus 21 ~g~~~idl~~~~~~----~~~~~~v~~a~~~~~~~~-~~~y~~-~~-~~lr~~la~~~~~~~~~~~~~~~i~~t~g~~~a 93 (377)
T 3fdb_A 21 YGQGVLPLWVAESD----FSTCPAVLQAITDAVQRE-AFGYQP-DG-SLLSQATAEFYADRYGYQARPEWIFPIPDVVRG 93 (377)
T ss_dssp SCTTSEECCSSCCC----SCCCHHHHHHHHHHHHTT-CCSSCC-SS-CCHHHHHHHHHHHHHCCCCCGGGEEEESCHHHH
T ss_pred cCCCeeeecccCCC----CCCCHHHHHHHHHHHHcC-CCCCCC-CC-HHHHHHHHHHHHHHhCCCCCHHHEEEeCChHHH
Confidence 37889999999854 678899999999988764 347888 77 899999999999888888899999999999999
Q ss_pred HHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCH
Q 014936 113 IDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSY 192 (415)
Q Consensus 113 l~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~ 192 (415)
+..++.++.++||+|+++.|+|+++...++..|.++..++.+++ +|+++++++++++++++++++|+||||.++|.
T Consensus 94 ~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~----~d~~~l~~~l~~~~~~v~i~~p~nptG~~~~~ 169 (377)
T 3fdb_A 94 LYIAIDHFTPAQSKVIVPTPAYPPFFHLLSATQREGIFIDATGG----INLHDVEKGFQAGARSILLCNPYNPLGMVFAP 169 (377)
T ss_dssp HHHHHHHHSCTTCCEEEEESCCTHHHHHHHHHTCCEEEEECTTS----CCHHHHHHHHHTTCCEEEEESSBTTTTBCCCH
T ss_pred HHHHHHHhcCCCCEEEEcCCCcHhHHHHHHHcCCEEEEccCCCC----CCHHHHHHHhccCCCEEEEeCCCCCCCCCCCH
Confidence 99999999999999999999999999999999999999998643 89999999998889999999999999999999
Q ss_pred HHHHHHHHHHhhcCcEEEEccccCCcccCC-CCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHH
Q 014936 193 QHLQKLAETANKLKTLVIADEVYGHLVFGD-KPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKV 271 (415)
Q Consensus 193 ~~l~~i~~~~~~~~~~li~De~~~~~~~~~-~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~ 271 (415)
+++++|+++|+++|+++|+||+|+.+.+++ ....++..+...++++++.|+||.++++|+|+||+++.+ +++
T Consensus 170 ~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~-------~~~ 242 (377)
T 3fdb_A 170 EWLNELCDLAHRYDARVLVDEIHAPLVFDGQHTVAAGVSDTAASVCITITAPSKAWNIAGLKCAQIIFSN-------PSD 242 (377)
T ss_dssp HHHHHHHHHHHHTTCEEEEECTTGGGBSSSCCCCGGGSCHHHHHHEEEEECSTTTTTCGGGCCEEEECCS-------HHH
T ss_pred HHHHHHHHHHHHcCCEEEEEcccchhhcCCCCCcccHHHccCCCcEEEEEeChHhccCcchhheEEEeCC-------HHH
Confidence 999999999999999999999999998877 555555554445678999999999999999999998754 257
Q ss_pred HHHHHhhcc-ccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhc-CCCCcCCCCCCCceEEEEecCccc
Q 014936 272 VERMKKYFD-ILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKE-IPCISCPHKPEGSMAVMLKLNLSL 349 (415)
Q Consensus 272 ~~~~~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~~~~~~~~~p~~g~~~~~~l~~~~ 349 (415)
++.+..... .+.+++++.+.++.++|+.. ++++++.+++++++++.+.+.|++ +|++. +..|.+++++|++++...
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~-~~~~~~~~~~~~~~~~~~ 320 (377)
T 3fdb_A 243 AEHWQQLSPVIKDGASTLGLIAAEAAYRYG-TDFLNQEVAYLKNNHDFLLHEIPKRIPGAK-ITPMQATYLMWIDFRDTT 320 (377)
T ss_dssp HHHHHHSCHHHHCCCCHHHHHHHHHHHHHC-HHHHHHHHHHHHHHHHHHHHHHHHHSTTCE-ECCCSBCSEEEEECTTSC
T ss_pred HHHHHHHHHhhcCCCCHHHHHHHHHHHhcc-HHHHHHHHHHHHHHHHHHHHHHHhhCCCce-EecCCeeEEEEEECcccC
Confidence 777776533 34678899999988888753 577899999999999999999998 88888 557888888899887521
Q ss_pred cCCCCCHHHHHHHHHhhcCeEEEcCCCCCC--CCeEEEEeeCChhhHHHHHHHHHHHHHH
Q 014936 350 LDDIIDDIDFCFKLAKEESVIILPGTAVGL--KNWLRVTFAVDPYSLEECLDRIKSFYQR 407 (415)
Q Consensus 350 ~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~--~~~iRi~~~~~~~~l~~~l~~l~~~~~~ 407 (415)
.+.+++..+++++||.+.||..|+. ++++||+++.+++++++++++|++++++
T Consensus 321 -----~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~~Ris~~~~~e~i~~~l~~l~~~l~~ 375 (377)
T 3fdb_A 321 -----IEGSPSEFFIEKAKVAMNDGAWFGEDGTGFCRLNFATSREVLEEAIDRMAKAVSH 375 (377)
T ss_dssp -----CCSCHHHHHHHHHCEECEEGGGGCGGGTTEEEEECCSCHHHHHHHHHHHHHHHTT
T ss_pred -----CCHHHHHHHHHhCCEEecCChhccCCCCCEEEEEeCCCHHHHHHHHHHHHHHHhh
Confidence 1245677777778999999998875 6899999988999999999999988754
No 23
>3dzz_A Putative pyridoxal 5'-phosphate-dependent C-S LYA; putative PLP-dependent aminotransferase; HET: MSE LLP PG4; 1.61A {Lactobacillus delbrueckii subsp} SCOP: c.67.1.0
Probab=100.00 E-value=1.7e-47 Score=362.37 Aligned_cols=355 Identities=19% Similarity=0.288 Sum_probs=304.8
Q ss_pred CcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHH
Q 014936 34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAI 113 (415)
Q Consensus 34 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al 113 (415)
+++++||+.|++. +++++.+.+++.+.+... ...|++. ..++++++++++++.+|.++++++|++|+|+++++
T Consensus 26 g~~~i~~~~~~~~----~~~~~~v~~a~~~~~~~~-~~~y~~~--~~~l~~~la~~l~~~~g~~~~~~~i~~~~g~~~a~ 98 (391)
T 3dzz_A 26 KEKELPMWIAEMD----FKIAPEIMASMEEKLKVA-AFGYESV--PAEYYKAVADWEEIEHRARPKEDWCVFASGVVPAI 98 (391)
T ss_dssp CTTCEECCSSCCS----SCCCHHHHHHHHHHHTTC-CCCCBCC--CHHHHHHHHHHHHHHHSCCCCGGGEEEESCHHHHH
T ss_pred CCCceeccccCCC----CCCCHHHHHHHHHHHhcC-cCCCCCC--CHHHHHHHHHHHHHHhCCCCCHHHEEECCCHHHHH
Confidence 6789999999854 778999999999998764 3467764 58999999999998888888899999999999999
Q ss_pred HHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeecc-CCCCCCCChhHHHhhcC-CCceEEEecCCCCccccCCC
Q 014936 114 DVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLL-PDKGWEVDLDDIESLAD-QNTVALVIINPGNPCGNVYS 191 (415)
Q Consensus 114 ~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~-~~~~~~~~~~~l~~~~~-~~~~~v~i~~p~nptG~~~~ 191 (415)
.+++.++.++||+|+++.|+|+++...++..|.+++.++++ .++.+.+|+++|+++++ +++++|++++|+||||.++|
T Consensus 99 ~~~~~~l~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~v~i~~p~nptG~~~~ 178 (391)
T 3dzz_A 99 SAMVRQFTSPGDQILVQEPVYNMFYSVIEGNGRRVISSDLIYENSKYSVNWADLEEKLATPSVRMMVFCNPHNPIGYAWS 178 (391)
T ss_dssp HHHHHHHSCTTCEEEECSSCCHHHHHHHHHTTCEEEECCCEEETTEEECCHHHHHHHHTSTTEEEEEEESSBTTTTBCCC
T ss_pred HHHHHHhCCCCCeEEECCCCcHHHHHHHHHcCCEEEEeeeeecCCceeecHHHHHHHHhccCceEEEEECCCCCCCcccC
Confidence 99999999999999999999999999999999999999885 34456689999999997 68999999999999999999
Q ss_pred HHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCC--CCCeEEEccCccccCCCCceEEEEEeeCCCCCCChH
Q 014936 192 YQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS--TVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKP 269 (415)
Q Consensus 192 ~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~--~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~ 269 (415)
.+++++|+++|+++|+++|+||+|+++.+.+....++..+.. .++++++.|+||.++++|+|+||+++++ +
T Consensus 179 ~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~d~~i~~~s~sK~~g~~G~r~G~~~~~~-------~ 251 (391)
T 3dzz_A 179 EEEVKRIAELCAKHQVLLISDEIHGDLVLTDEDITPAFTVDWDAKNWVVSLISPSKTFNLAALHAACAIIPN-------P 251 (391)
T ss_dssp HHHHHHHHHHHHHTTCEEEEECTTTTCBCSSCCCCCGGGSCTTTGGGEEEEECSHHHHTCTTTCCEEEECCS-------H
T ss_pred HHHHHHHHHHHHHCCCEEEEecccccccCCCCCceehhhcCccccCcEEEEEeChhhccccchhheEEEECC-------H
Confidence 999999999999999999999999999988766666666553 4578999999999999999999999863 2
Q ss_pred HHHHHHHhhcc--ccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhc-CCCCcCCCCCCCceEEEEecC
Q 014936 270 KVVERMKKYFD--ILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKE-IPCISCPHKPEGSMAVMLKLN 346 (415)
Q Consensus 270 ~~~~~~~~~~~--~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~~~~~~~~~p~~g~~~~~~l~ 346 (415)
++.+.+..... ..++++++.+.++..+++. ...++++.+++++++++.+.+.|++ +|++. +..|.+++++|++++
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~-~~~~~~~~~~~~~~~ 329 (391)
T 3dzz_A 252 DLRARAEESFFLAGIGEPNLLAIPAAIAAYEE-GHDWLRELKQVLRDNFAYAREFLAKEVPEVK-VLDSNASYLAWVDIS 329 (391)
T ss_dssp HHHHHHHHHHHHHTCSSCCTTHHHHHHHHHHH-CHHHHHHHHHHHHHHHHHHHHHHHHHCTTSE-ECCCCBSSEEEEECG
T ss_pred HHHHHHHHHHHhhccCCCCHHHHHHHHHHHhc-cHHHHHHHHHHHHHHHHHHHHHHHhhCCCcE-EeccCceEEEEEehh
Confidence 57777766532 2356788888888888865 3577899999999999999999998 88988 557888999999886
Q ss_pred ccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCC--CCeEEEEeeCChhhHHHHHHHHHHHHHHH
Q 014936 347 LSLLDDIIDDIDFCFKLAKEESVIILPGTAVGL--KNWLRVTFAVDPYSLEECLDRIKSFYQRH 408 (415)
Q Consensus 347 ~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~--~~~iRi~~~~~~~~l~~~l~~l~~~~~~~ 408 (415)
... .+..++...+++++||.+.||..|+. ++++||+++.+++++++++++|+++++++
T Consensus 330 ~~~----~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRis~~~~~~~i~~~l~~l~~~l~~~ 389 (391)
T 3dzz_A 330 ALG----MNAEDFCKYLREKTGLIISAGNGYRGNGHEFVRINLACPKELVIDGMQRLKQGVLNL 389 (391)
T ss_dssp GGC----SCHHHHHHHHHHHHCEECEESGGGCTTGGGEEEEECCSCHHHHHHHHHHHHHHHHTC
T ss_pred hcC----CCHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEecCCHHHHHHHHHHHHHHHHHh
Confidence 421 25677878776678999999998876 48999999989999999999999988653
No 24
>2dou_A Probable N-succinyldiaminopimelate aminotransfera; PLP-dependent enzyme, structural genomics, NPPSFA; HET: EPE; 2.30A {Thermus thermophilus}
Probab=100.00 E-value=7.2e-48 Score=363.04 Aligned_cols=349 Identities=20% Similarity=0.301 Sum_probs=293.4
Q ss_pred cCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCC-cEEEeCChHH
Q 014936 33 NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPN-DVFVTSGCTQ 111 (415)
Q Consensus 33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~-~i~i~~g~~~ 111 (415)
.+++++||+.|.+. +++++.+++++.+.+.......|++..|..++|+++++++.+.+|..++++ +|++|+|+++
T Consensus 23 ~g~~~idl~~~~~~----~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~l~~~ia~~~~~~~g~~~~~~~~v~~~~g~~~ 98 (376)
T 2dou_A 23 RGVGLIDLSIGSTD----LPPPEAPLKALAEALNDPTTYGYCLKSCTLPFLEEAARWYEGRYGVGLDPRREALALIGSQE 98 (376)
T ss_dssp TTCCCEECSSCCCC----CCCCHHHHHHHHHHTTCGGGSSCCCHHHHHHHHHHHHHHHHHHHSCCCCTTTSEEEESSHHH
T ss_pred cCCCEEeccCCCCC----CCCCHHHHHHHHHHHhCCCcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCccEEEcCCcHH
Confidence 36789999999864 556899999999988654455788766889999999999988778777777 9999999999
Q ss_pred HHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCC
Q 014936 112 AIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYS 191 (415)
Q Consensus 112 al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~ 191 (415)
++.+++.++.++||+|+++.|+|+.+...++..|.++..+++ ++++.+|++++++.++++++++++++|+||||.++|
T Consensus 99 a~~~~~~~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~--~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~ 176 (376)
T 2dou_A 99 GLAHLLLALTEPEDLLLLPEVAYPSYFGAARVASLRTFLIPL--REDGLADLKAVPEGVWREAKVLLLNYPNNPTGAVAD 176 (376)
T ss_dssp HHHHHHHHHCCTTCEEEEESSCCHHHHHHHHHTTCEEEEECB--CTTSSBCGGGSCHHHHHHEEEEEECSSCTTTCCCCC
T ss_pred HHHHHHHHhcCCCCEEEECCCCcHhHHHHHHHcCCEEEEeeC--CCCCCCCHHHHHHhhccCceEEEECCCCCCcCccCC
Confidence 999999999999999999999999999999999999999987 456678999999888777899999999999999999
Q ss_pred HHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHH
Q 014936 192 YQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKV 271 (415)
Q Consensus 192 ~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~ 271 (415)
.+++++|+++|+++|+++|+||+|+.+.+++.....+...+..++++++.|+||.|+++|+|+||+++++ ++
T Consensus 177 ~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~--------~~ 248 (376)
T 2dou_A 177 WGYFEEALGLARKHGLWLIHDNPYVDQVYEGEAPSPLALPGAKERVVELFSLSKSYNLAGFRLGFALGSE--------EA 248 (376)
T ss_dssp HHHHHHHHHHHHHTTCEEEEECTTGGGBSSSCCCCGGGSTTGGGTEEEEEEHHHHHTCGGGCCEEEEECH--------HH
T ss_pred HHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCChhhcCCCCCcEEEEecchhhcCChhheeEEEecCH--------HH
Confidence 9999999999999999999999999988765322222222334578999999999989999999999864 67
Q ss_pred HHHHHhhcc-ccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCcccc
Q 014936 272 VERMKKYFD-ILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLL 350 (415)
Q Consensus 272 ~~~~~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~ 350 (415)
++.+..... .+.+.+++.+.++.++|+.. ++++++.+++++++++.+.+.|+++ +. +..|.+|+|+|++++..
T Consensus 249 ~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~--~~-~~~~~~~~~~~~~~~~~-- 322 (376)
T 2dou_A 249 LARLERVKGVIDFNQYAGVLRMGVEALKTP-KEVVRGYARVYRERALGMAEALKGV--LS-LLPPRATMYLWGRLPEG-- 322 (376)
T ss_dssp HHHHHHHHHHHCCCSCHHHHHHHHHHHTSC-HHHHHHHHHHHHHHHHHHHHHHTTT--SE-ECCCCBSSEEEEECCTT--
T ss_pred HHHHHHHHHhcccCCCHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHHHHHHh--cC-ccCCCeeEEEEEECCCC--
Confidence 777776533 34567889999999999764 6788999999999999999999887 66 44677889999988641
Q ss_pred CCCCCHHHHHHHHHhhcCeEEEcCCCCCC--CCeEEEEeeCChhhHHHHHHHHHHHH
Q 014936 351 DDIIDDIDFCFKLAKEESVIILPGTAVGL--KNWLRVTFAVDPYSLEECLDRIKSFY 405 (415)
Q Consensus 351 ~~~~~~~~~~~~ll~~~gi~v~~g~~~~~--~~~iRi~~~~~~~~l~~~l~~l~~~~ 405 (415)
.+..++...++++ ||.+.||..|+. ++++||+++.+++++++++++|++++
T Consensus 323 ---~~~~~~~~~l~~~-gi~v~~g~~f~~~~~~~~Ris~~~~~~~i~~~l~~l~~~l 375 (376)
T 2dou_A 323 ---VDDLEFGLRLVER-GVALAPGRGFGPGGKGFVRIALVRPLEELLEAAKRIREAL 375 (376)
T ss_dssp ---CCHHHHHHHHHHT-TEECEEGGGGCGGGTTEEEEECCSCHHHHHHHHHHHHHTC
T ss_pred ---CCHHHHHHHHHHC-CEEEcCchhhCCCCCCeEEEEecCCHHHHHHHHHHHHHHh
Confidence 2456777777655 999999988864 68999999888999999999998764
No 25
>3kax_A Aminotransferase, classes I and II; PLP, C-S lyase, transf structural genomics, center for structural genomics of INFE diseases, csgid; HET: LLP MSE PLP; 1.70A {Bacillus anthracis str} PDB: 3t32_A*
Probab=100.00 E-value=3.3e-47 Score=359.34 Aligned_cols=353 Identities=17% Similarity=0.315 Sum_probs=303.0
Q ss_pred cCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHH
Q 014936 33 NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQA 112 (415)
Q Consensus 33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~a 112 (415)
+++++++|+.|++. +++++.+.+++.+.+... ...|++. ..++++++++++++.+|..+++++|++|+|++++
T Consensus 22 ~~~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~~-~~~y~~~--~~~~~~~l~~~l~~~~g~~~~~~~v~~~~g~~~a 94 (383)
T 3kax_A 22 KNEELIHAWIADMD----FEVPQPIQTALKKRIEHP-IFGYTLP--PENIGDIICNWTKKQYNWDIQKEWIVFSAGIVPA 94 (383)
T ss_dssp SSSCCEECCCSSCS----SCCCHHHHHHHHHHHHSC-CCCCCCC--CTTHHHHHHHHHHHHHCCCCCGGGEEEESCHHHH
T ss_pred CCCCeeecccccCC----CCCCHHHHHHHHHHHhcC-CCCCCCC--CHHHHHHHHHHHHHHhCCCCChhhEEEcCCHHHH
Confidence 36789999999854 778899999999998764 3467764 5799999999999888877889999999999999
Q ss_pred HHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCC-CCCCChhHHHhhcCCCceEEEecCCCCccccCCC
Q 014936 113 IDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDK-GWEVDLDDIESLADQNTVALVIINPGNPCGNVYS 191 (415)
Q Consensus 113 l~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~-~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~ 191 (415)
+..++.++.++||+|+++.|+|+++...++..|.++..+++++++ +|.+|+++|+++++++++++++++|+||||.++|
T Consensus 95 ~~~~~~~l~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~i~~p~nptG~~~~ 174 (383)
T 3kax_A 95 LSTSIQAFTKENESVLVQPPIYPPFFEMVTTNNRQLCVSPLQKQNDTYAIDFEHLEKQFQQGVKLMLLCSPHNPIGRVWK 174 (383)
T ss_dssp HHHHHHHHCCTTCEEEECSSCCHHHHHHHHHTTCEEEECCCEEETTEEECCHHHHHHHHTTTCCEEEEESSBTTTTBCCC
T ss_pred HHHHHHHhCCCCCEEEEcCCCcHHHHHHHHHcCCEEEeccceecCCcEEEcHHHHHHHhCcCCeEEEEeCCCCCCCcCcC
Confidence 999999999999999999999999999999999999999886433 3668999999999888999999999999999999
Q ss_pred HHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCC--CCCeEEEccCccccCCCCceEEEEEeeCCCCCCChH
Q 014936 192 YQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS--TVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKP 269 (415)
Q Consensus 192 ~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~--~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~ 269 (415)
.+++++|+++|+++|+++|+||+|+.+.+++....++..+.. .++++++.|+||.++++|+|+||+++++ +
T Consensus 175 ~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~-------~ 247 (383)
T 3kax_A 175 KEELTKLGSLCTKYNVIVVADEIHSDIIYADHTHTPFASLSEELAARTITCMAPSKTFNIAGLQASIIIIPN-------E 247 (383)
T ss_dssp HHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSCHHHHTTEEEEECSHHHHTCGGGCCEEEECCC-------H
T ss_pred HHHHHHHHHHHHHCCCEEEEEccccccccCCCCceeHhhcCccccCcEEEEEEChhhccCcchhheEEEeCC-------H
Confidence 999999999999999999999999999988766666666654 3678999999999999999999999854 2
Q ss_pred HHHHHHHhhcc--ccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhc-CCCCcCCCCCCCceEEEEecC
Q 014936 270 KVVERMKKYFD--ILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKE-IPCISCPHKPEGSMAVMLKLN 346 (415)
Q Consensus 270 ~~~~~~~~~~~--~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~~~~~~~~~p~~g~~~~~~l~ 346 (415)
++.+.++.... ..++++++.+.++..+++. .++++++.+++++++++.+.+.|++ +|++. +..|.+++++|+.++
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~-~~~~~~~~~~~~~~~ 325 (383)
T 3kax_A 248 KLRQAFTSIQYRQGFHGLNIFAYTAMQSAYTE-CNDWLNEIRFYIEDNAKFACEYIKDHIPTLS-VMKPEGSFLLWIDCS 325 (383)
T ss_dssp HHHHHHHHHHHHTTCCCCCHHHHHHHHHHTTT-CHHHHHHHHHHHHHHHHHHHHHHHHHCTTCE-ECCCSBSSEEEEECG
T ss_pred HHHHHHHHHHhhcccCCCCHHHHHHHHHHHHh-hHHHHHHHHHHHHHHHHHHHHHHHhhCCCce-EecCCceEEEEEEcc
Confidence 57777766532 2247888999999988876 3577899999999999999999997 78888 447888999999886
Q ss_pred ccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCC--CCeEEEEeeCChhhHHHHHHHHHHHH
Q 014936 347 LSLLDDIIDDIDFCFKLAKEESVIILPGTAVGL--KNWLRVTFAVDPYSLEECLDRIKSFY 405 (415)
Q Consensus 347 ~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~--~~~iRi~~~~~~~~l~~~l~~l~~~~ 405 (415)
... .+..++...+++++||.+.||..|+. .+++|++++.+++++++++++|++++
T Consensus 326 ~~~----~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRi~~~~~~~~i~~~l~~l~~~l 382 (383)
T 3kax_A 326 ALN----LSQDERTKLLEEKGKIIVEPGEKYGLGGEEHIGINIGCPRSVLEEILNRLRHTF 382 (383)
T ss_dssp GGC----CCHHHHHHHHHHTSCEECEESGGGCTTCTTEEEEECSSCHHHHHHHHHHHHHHH
T ss_pred ccC----CCHHHHHHHHHhhCCEEeECchhhcCCCCCeEEEEEcCCHHHHHHHHHHHHHHh
Confidence 421 25677888876678999999998876 58999999989999999999998875
No 26
>1yiz_A Kynurenine aminotransferase; glutamine transaminase; kynurenic acid, mosquito, PLP-enzyme, pyridoxal phosphate, PLP; HET: LLP; 1.55A {Aedes aegypti} SCOP: c.67.1.1 PDB: 1yiy_A* 2r5c_A* 2r5e_A*
Probab=100.00 E-value=3.1e-47 Score=364.97 Aligned_cols=359 Identities=23% Similarity=0.359 Sum_probs=300.1
Q ss_pred CcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcC--CCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCC-cEEEeCChH
Q 014936 34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSE--KFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPN-DVFVTSGCT 110 (415)
Q Consensus 34 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~--~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~-~i~i~~g~~ 110 (415)
+.++|+|+.|.++ +++++.+.+++.+.+... ....|++..|..++|+++++++++.+|.+++++ +|++|+|++
T Consensus 36 ~~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~~~~~~~~y~~~~g~~~l~~~la~~l~~~~g~~~~~~~~v~~~~g~~ 111 (429)
T 1yiz_A 36 QYKPLNLGQGFPD----YHAPKYALNALAAAANSPDPLANQYTRGFGHPRLVQALSKLYSQLVDRTINPMTEVLVTVGAY 111 (429)
T ss_dssp HHCCEECCSSSCS----SCCCHHHHHHHHHHHTCSCGGGGSCCCSSCCHHHHHHHHHHHHHHHTSCCCTTTSEEEESHHH
T ss_pred cCCEEEecCCCCC----CCCCHHHHHHHHHHHhccccCccCCCCCCCcHHHHHHHHHHHHHHhCCCCCCcCCEEEecChH
Confidence 3568999999864 567899999999988752 235788878899999999999988778778888 999999999
Q ss_pred HHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCC--------CCCCChhHHHhhcCCCceEEEecCC
Q 014936 111 QAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDK--------GWEVDLDDIESLADQNTVALVIINP 182 (415)
Q Consensus 111 ~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~--------~~~~~~~~l~~~~~~~~~~v~i~~p 182 (415)
+++..++++++++||+|+++.|+|+.+...++..|.++..++.++++ ++.+|++.|+++++++++++++++|
T Consensus 112 ~a~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~p 191 (429)
T 1yiz_A 112 EALYATIQGHVDEGDEVIIIEPFFDCYEPMVKAAGGIPRFIPLKPNKTGGTISSADWVLDNNELEALFNEKTKMIIINTP 191 (429)
T ss_dssp HHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECBCCCSSSSEEGGGCBCCHHHHHHHCCTTEEEEEEESS
T ss_pred HHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEEeCCcccccccccccCcccCHHHHHHHhccCceEEEECCC
Confidence 99999999999999999999999999999999999999999986543 5678999999999888999999999
Q ss_pred CCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccC-CCCCeEEEccCccccCCCCceEEEEEeeC
Q 014936 183 GNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFG-STVPILTLGSLSKRWIVPGWRLGWFVTTD 261 (415)
Q Consensus 183 ~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~-~~~~~i~~~s~sK~~~~~G~r~G~~~~~~ 261 (415)
+||||.++|.+++++|+++|+++|+++|+||+|.++.+++.+..++..+. ..++++++.|+||.|+++|+|+||+++++
T Consensus 192 ~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~~~~s~sK~~~~~G~r~G~~~~~~ 271 (429)
T 1yiz_A 192 HNPLGKVMDRAELEVVANLCKKWNVLCVSDEVYEHMVFEPFEHIRICTLPGMWERTITIGSAGKTFSLTGWKIGWAYGPE 271 (429)
T ss_dssp CTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTSCCCCGGGSTTTGGGEEEEEEHHHHHTCGGGCCEEEESCH
T ss_pred CCCCCccCCHHHHHHHHHHHHHcCcEEEEeccccccccCCCCCcChhhccCCcCceEEEecchhccCCCCcceEEEEeCH
Confidence 99999999999999999999999999999999999988776555555553 34568999999999998999999999865
Q ss_pred CCCCCChHHHHHHHHhhc-cccCCchhHHHHHHHHhhCC-----Cc-HHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCC
Q 014936 262 PCGMFRKPKVVERMKKYF-DILGDPATFIQAAVPSILQQ-----PD-EVFFKKTLNLLKQSVDICYNKIKEIPCISCPHK 334 (415)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~a~~~~l~~-----~~-~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~ 334 (415)
++++.+.... ..+++.+++.|.++.++|+. .. ++++++.+++++++++.+.+.|+++ ++. +..
T Consensus 272 --------~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~ 341 (429)
T 1yiz_A 272 --------ALLKNLQMVHQNCVYTCATPIQEAIAVGFETELKRLKSPECYFNSISGELMAKRDYMASFLAEV-GMN-PTV 341 (429)
T ss_dssp --------HHHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHTTTTSTTSHHHHHHHHHHHHHHHHHHHHHHH-TCE-EEE
T ss_pred --------HHHHHHHHHHhhcccCCChHHHHHHHHHHhcccccccchHHHHHHHHHHHHHHHHHHHHHHHhC-CCc-ccC
Confidence 6777776653 33567788899888888875 32 4678899999999999999999987 777 446
Q ss_pred CCCceEEEEecCcccc-------CCCCCHHHHHHHHHhhcCeEEEcCCCCCC-------CCeEEEEeeCChhhHHHHHHH
Q 014936 335 PEGSMAVMLKLNLSLL-------DDIIDDIDFCFKLAKEESVIILPGTAVGL-------KNWLRVTFAVDPYSLEECLDR 400 (415)
Q Consensus 335 p~~g~~~~~~l~~~~~-------~~~~~~~~~~~~ll~~~gi~v~~g~~~~~-------~~~iRi~~~~~~~~l~~~l~~ 400 (415)
|.+|+|+|++++.... .+..+..++...+++++||.+.||..|+. .+++||+++.+++++++++++
T Consensus 342 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gv~v~~g~~f~~~~~~~~~~~~iRis~~~~~e~i~~~l~~ 421 (429)
T 1yiz_A 342 PQGGYFMVADWSSLDSKVDLTQETDARKDYRFTKWMTKSVGLQGIPPSAFYSEPNKHLGEDFVRYCFFKKDENLQKAAEI 421 (429)
T ss_dssp CSBSSEEEEECCSSCTTTTCCSSSSSCHHHHHHHHHHHHTSEECBCGGGGSCGGGGGGTTTEEEEECCSCHHHHHHHHHH
T ss_pred CCcceEEEEEcccccccccccccccCCCHHHHHHHHHHhCCEEEeCchHhCCCcccCCCCCeEEEEecCCHHHHHHHHHH
Confidence 7789999999864210 00013456777777678999999987753 579999998899999999999
Q ss_pred HHHHHH
Q 014936 401 IKSFYQ 406 (415)
Q Consensus 401 l~~~~~ 406 (415)
|+++++
T Consensus 422 l~~~l~ 427 (429)
T 1yiz_A 422 LRKWKG 427 (429)
T ss_dssp HHHHSC
T ss_pred HHHhcc
Confidence 988753
No 27
>2z61_A Probable aspartate aminotransferase 2; amino acid aminotransferase, kynurenine aminotransferase, MJ0684, cytoplasm; HET: LLP; 2.20A {Methanococcus jannaschii}
Probab=100.00 E-value=7.3e-47 Score=355.38 Aligned_cols=364 Identities=23% Similarity=0.415 Sum_probs=301.0
Q ss_pred cccCCccCCcchhhHHHHHHHhhhcccccccCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHH
Q 014936 3 ISNGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLT 82 (415)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~l 82 (415)
+|++.....++ .+.++.....+.. ..++++++|+.|.++ +++++.+++++.+.+... ...|++..|..++
T Consensus 2 ~~~~~~~~~~~--~~~~~~~~~~~~~---~~g~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~~-~~~y~~~~~~~~l 71 (370)
T 2z61_A 2 LSKRLLNFESF--EVMDILALAQKLE---SEGKKVIHLEIGEPD----FNTPKPIVDEGIKSLKEG-KTHYTDSRGILEL 71 (370)
T ss_dssp CCHHHHHCCCC--TTHHHHHHHHHHH---HTTCCCEECCCCSCS----SCCCHHHHHHHHHHHHTT-CCSCCCTTCCHHH
T ss_pred hhhhhhhcccc--HHHHHHHHHHHHH---hcCCCEEEccCCCCC----CCCCHHHHHHHHHHHHcC-ccCCCCCCCCHHH
Confidence 34555555665 4555555433322 236789999999874 455789999999988754 3578887899999
Q ss_pred HHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCC
Q 014936 83 RRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVD 162 (415)
Q Consensus 83 r~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 162 (415)
|+++++++++.+|..+++++|++|+|+++++..++.++.++||+|+++.|+|+++...++..|.++..++ +|
T Consensus 72 ~~~la~~~~~~~g~~~~~~~v~~~~g~~~a~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~v~--------~d 143 (370)
T 2z61_A 72 REKISELYKDKYKADIIPDNIIITGGSSLGLFFALSSIIDDGDEVLIQNPCYPCYKNFIRFLGAKPVFCD--------FT 143 (370)
T ss_dssp HHHHHHHHHHHSSCCCCGGGEEEESSHHHHHHHHHHHHCCTTCEEEEESSCCTHHHHHHHHTTCEEEEEC--------SS
T ss_pred HHHHHHHHHHHhCCCCChhhEEECCChHHHHHHHHHHhcCCCCEEEEeCCCchhHHHHHHHcCCEEEEeC--------CC
Confidence 9999999998888888999999999999999999999999999999999999999999999999998876 58
Q ss_pred hhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccC-CCCCeEEEc
Q 014936 163 LDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFG-STVPILTLG 241 (415)
Q Consensus 163 ~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~-~~~~~i~~~ 241 (415)
+++|++.++++++++++++|+||||.+++.+ |+++|+++|+++|+||+|+.+.+++. ..++..+. ..++++++.
T Consensus 144 ~~~l~~~l~~~~~~v~~~~p~nptG~~~~~~----l~~~~~~~~~~li~De~~~~~~~~g~-~~~~~~~~~~~~~~i~~~ 218 (370)
T 2z61_A 144 VESLEEALSDKTKAIIINSPSNPLGEVIDRE----IYEFAYENIPYIISDEIYNGLVYEGK-CYSAIEFDENLEKTILIN 218 (370)
T ss_dssp HHHHHHHCCSSEEEEEEESSCTTTCCCCCHH----HHHHHHHHCSEEEEECTTTTCBSSSC-CCCGGGTCTTCSSEEEEE
T ss_pred HHHHHHhcccCceEEEEcCCCCCcCcccCHH----HHHHHHHcCCEEEEEcchhhcccCCC-CcCHHHccCCCCcEEEEe
Confidence 9999999988889999999999999999977 88999999999999999999887653 33444442 345789999
Q ss_pred cCccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhhcc-ccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHH
Q 014936 242 SLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFD-ILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICY 320 (415)
Q Consensus 242 s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~ 320 (415)
|+||.++++|+|+||+++++ ++++.++.... .+++++++.+.++.++|+...+.++++.+++++++++.+.
T Consensus 219 s~sK~~~~~G~r~G~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~ 290 (370)
T 2z61_A 219 GFSKLYAMTGWRIGYVISND--------EIIEAILKLQQNLFISAPTISQYAALKAFEKETEREINSMIKEFDRRRRLVL 290 (370)
T ss_dssp ESTTTTTCGGGCCEEEECCH--------HHHHHHHHHHHHHTSSSCHHHHHHHGGGGSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cChhccCCccceEEEEEECH--------HHHHHHHHHHhhcccCCCHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHH
Confidence 99999988999999999865 67777766533 3457888999999888864125678889999999999999
Q ss_pred HHhhcCCCCcCCCCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCC--CCeEEEEeeCChhhHHHHH
Q 014936 321 NKIKEIPCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGL--KNWLRVTFAVDPYSLEECL 398 (415)
Q Consensus 321 ~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~--~~~iRi~~~~~~~~l~~~l 398 (415)
+.|+++ ++. +..|.+|+++|++++. +..++...+++++||.+.||..|+. ++++||+++.+++++++++
T Consensus 291 ~~L~~~-g~~-~~~~~~~~~~~~~~~~-------~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~~Ri~~~~~~~~i~~~~ 361 (370)
T 2z61_A 291 KYVKDF-GWE-VNNPIGAYYVFPNIGE-------DGREFAYKLLKEKFVALTPGIGFGSKGKNYIRISYANSYENIKEGL 361 (370)
T ss_dssp HHHHHT-TCB-CCCCCBTTEECCBCSS-------CHHHHHHHHHHHHCEECEEGGGGCGGGSSBEEEECCSCHHHHHHHH
T ss_pred HHHHHc-CCe-ecCCCcceEEEEecCC-------CHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEEeCCHHHHHHHH
Confidence 999988 777 4467889999988753 4667777776578999999988874 6899999998999999999
Q ss_pred HHHHHHHH
Q 014936 399 DRIKSFYQ 406 (415)
Q Consensus 399 ~~l~~~~~ 406 (415)
++|+++++
T Consensus 362 ~~l~~~l~ 369 (370)
T 2z61_A 362 ERIKEFLN 369 (370)
T ss_dssp HHHHHHHC
T ss_pred HHHHHHHh
Confidence 99998764
No 28
>3ezs_A Aminotransferase ASPB; NP_207418.1, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 2.19A {Helicobacter pylori 26695} SCOP: c.67.1.0
Probab=100.00 E-value=1.8e-47 Score=360.34 Aligned_cols=342 Identities=22% Similarity=0.302 Sum_probs=288.8
Q ss_pred cCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHH
Q 014936 33 NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQA 112 (415)
Q Consensus 33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~a 112 (415)
++ +++||+.|++. +++++.+++++.+.+. ....|++..|..++|+++++++.+.+|..+++++|++|+|++++
T Consensus 22 ~g-~~i~l~~~~~~----~~~~~~v~~a~~~~~~--~~~~y~~~~g~~~lr~~la~~l~~~~g~~~~~~~i~~t~g~~~a 94 (376)
T 3ezs_A 22 KK-RGLDLGIGEPQ----FETPKFIQDALKNHTH--SLNIYPKSAFEESLRAAQRGFFKRRFKIELKENELISTLGSREV 94 (376)
T ss_dssp SS-CCCBCSSCCCC----SCCCHHHHHHHHTTGG--GGGSCCCTTCCHHHHHHHHHHHHHHHSCCCCGGGEEEESSSHHH
T ss_pred cC-CEEEeCCCCCC----CCCCHHHHHHHHHhhh--hcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCHHHEEECcCcHHH
Confidence 45 89999999964 6678999999988773 34589988899999999999998888877789999999999999
Q ss_pred HHHHHHHhcCC--CCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCC
Q 014936 113 IDVAMALLSRP--GANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVY 190 (415)
Q Consensus 113 l~~~~~~l~~~--gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~ 190 (415)
+..++.++.++ ||+|+++.|+|+.+...++..|.++..++.++++++ ++ ++++.+.++++++++++|+||||.++
T Consensus 95 l~~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~--~~-~l~~~~~~~~~~v~~~~p~nptG~~~ 171 (376)
T 3ezs_A 95 LFNFPSFVLFDYQNPTIAYPNPFYQIYEGAAKFIKAKSLLMPLTKENDF--TP-SLNEKELQEVDLVILNSPNNPTGRTL 171 (376)
T ss_dssp HHHHHHHHTTTCSSCEEEEEESCCTHHHHHHHHTTCEEEEEECCGGGTS--CC-CCCHHHHHHCSEEEECSSCTTTCCCC
T ss_pred HHHHHHHHcCCCCCCEEEEecCCcHhHHHHHHHcCCEEEEcccCCCCCc--ch-hHHhhhccCCCEEEEcCCCCCcCCCC
Confidence 99999999999 999999999999999999999999999998655443 33 55555656788999999999999999
Q ss_pred CHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccC-----CCCCeEEEccCccccCCCCceEEEEEeeCCCCC
Q 014936 191 SYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFG-----STVPILTLGSLSKRWIVPGWRLGWFVTTDPCGM 265 (415)
Q Consensus 191 ~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~-----~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~ 265 (415)
+.+++++|+++|+++|+++|+||+|..+.+++.....+...+ ..++++++.|+||.|+++|+|+||+++++
T Consensus 172 ~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~---- 247 (376)
T 3ezs_A 172 SLEELISWVKLALKHDFILINDECYSEIYENTPPPSLLEACMLAGNEAFKNVLVIHSLSKRSSAPGLRSGFIAGDS---- 247 (376)
T ss_dssp CHHHHHHHHHHHHHHTCEEEEECTTTTCBSSSCCCCHHHHHHHTTCTTCTTEEEEEESTTTTTCGGGCCEEEEECH----
T ss_pred CHHHHHHHHHHHHHcCcEEEEEccchhhccCCCCCCHHHccccccccccCcEEEEecchhccCCccceeEEEeeCH----
Confidence 999999999999999999999999999888763322222211 45678999999999989999999999854
Q ss_pred CChHHHHHHHHhhcc-ccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEe
Q 014936 266 FRKPKVVERMKKYFD-ILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLK 344 (415)
Q Consensus 266 ~~~~~~~~~~~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~ 344 (415)
++++.+..... .+++.+++.+.++.++|+. .+++++.+++++++++.+.+.|+ ++. .|.+|+|+|++
T Consensus 248 ----~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~--~~~~~~~~~~~~~~~~~l~~~l~---~~~---~~~~~~~~~~~ 315 (376)
T 3ezs_A 248 ----RLLEKYKAFRAYLGYTSANAIQKASEAAWLD--DRHAEFFRNIYANNLKLARKIFK---NTL---IYPYSFYVYLP 315 (376)
T ss_dssp ----HHHHHHHHHHTTTCCCCCHHHHHHHHHHHHC--SHHHHHHHHHHHHHHHHHHHHST---TCC---CCSBSSEEEEE
T ss_pred ----HHHHHHHHHHhhhcCCCChHHHHHHHHHHhC--cHHHHHHHHHHHHHHHHHHHHhc---CCC---CCCcceEEEEE
Confidence 68888776643 3567889999999999986 36788999999999999999997 343 67889999998
Q ss_pred cCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCC----CCCeEEEEeeCChhhHHHHHHHHHHHHHHH
Q 014936 345 LNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVG----LKNWLRVTFAVDPYSLEECLDRIKSFYQRH 408 (415)
Q Consensus 345 l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~----~~~~iRi~~~~~~~~l~~~l~~l~~~~~~~ 408 (415)
++ +..++...+++++||.+.||..|+ .++++||+++.+++++++++++|+++++++
T Consensus 316 ~~--------~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~~~iRis~~~~~~~i~~~l~~l~~~l~~~ 375 (376)
T 3ezs_A 316 VQ--------NGENFAKTLYQNEGIITLPALYLGRNRIGADYVRLALVYDTPLLEKPLEIIETYRENH 375 (376)
T ss_dssp CS--------CHHHHHHHHHHHHCCBCEEGGGGCSTTTTTTEEEEECCSCHHHHHHHHHHHHHHHCC-
T ss_pred CC--------CHHHHHHHHHHhCCEEEeCcHHhCCCCCCCCeEEEEEcCCHHHHHHHHHHHHHHHHhc
Confidence 86 366777887765899999999887 368999999889999999999999987643
No 29
>1c7n_A Cystalysin; transferase, aminotransferase, pyridoxal phosphate; HET: PLP; 1.90A {Treponema denticola} SCOP: c.67.1.3 PDB: 1c7o_A*
Probab=100.00 E-value=6.1e-47 Score=359.59 Aligned_cols=356 Identities=17% Similarity=0.267 Sum_probs=298.5
Q ss_pred cceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHH
Q 014936 35 KKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAID 114 (415)
Q Consensus 35 ~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~ 114 (415)
+++++|+.|++. +++++.+.+++.+.+... ...|++. ..++|+++++++++.+|..+++++|++|+|+++++.
T Consensus 31 ~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~~-~~~y~~~--~~~l~~~la~~l~~~~g~~~~~~~v~~t~g~~~a~~ 103 (399)
T 1c7n_A 31 NEVVPLSVADME----FKNPPELIEGLKKYLDET-VLGYTGP--TEEYKKTVKKWMKDRHQWDIQTDWIINTAGVVPAVF 103 (399)
T ss_dssp TTCCCCCSSSCS----SCCCHHHHHHHHHHHHHC-CCSSBCC--CHHHHHHHHHHHHHHHCCCCCGGGEEEESSHHHHHH
T ss_pred CCceeeeecCCC----CCCCHHHHHHHHHHHhcC-CCCCCCC--cHHHHHHHHHHHHHHhCCCCChhhEEEcCCHHHHHH
Confidence 578999999854 667899999999988643 3478764 899999999999887777788899999999999999
Q ss_pred HHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCC-CCCCChhHHHhhcC-CCceEEEecCCCCccccCCCH
Q 014936 115 VAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDK-GWEVDLDDIESLAD-QNTVALVIINPGNPCGNVYSY 192 (415)
Q Consensus 115 ~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~-~~~~~~~~l~~~~~-~~~~~v~i~~p~nptG~~~~~ 192 (415)
+++.++.++||+|+++.|+|+++...++..|.++..++.++++ +|.+|+++|+++++ ++++++++++|+||||.++|.
T Consensus 104 ~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~~ 183 (399)
T 1c7n_A 104 NAVREFTKPGDGVIIITPVYYPFFMAIKNQERKIIECELLEKDGYYTIDFQKLEKLSKDKNNKALLFCSPHNPVGRVWKK 183 (399)
T ss_dssp HHHHHHCCTTCEEEECSSCCTHHHHHHHTTTCEEEECCCEEETTEEECCHHHHHHHHTCTTEEEEEEESSBTTTTBCCCH
T ss_pred HHHHHhcCCCCEEEEcCCCcHhHHHHHHHcCCEEEecccccCCCCEEEcHHHHHHHhccCCCcEEEEcCCCCCCCcCcCH
Confidence 9999999999999999999999999999999999998875322 45689999999987 678999999999999999999
Q ss_pred HHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCC--CCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHH
Q 014936 193 QHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS--TVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPK 270 (415)
Q Consensus 193 ~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~--~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~ 270 (415)
+++++|+++|+++|+++|+||+|+.+.+++....++..+.. .++++++.|+||.++++|+|+||+++++ ++
T Consensus 184 ~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~-------~~ 256 (399)
T 1c7n_A 184 DELQKIKDIVLKSDLMLWSDEIHFDLIMPGYEHTVFQSIDEQLADKTITFTAPSKTFNIAGMGMSNIIIKN-------PD 256 (399)
T ss_dssp HHHHHHHHHHHHSSCEEEEECTTTTCBCTTCCCCCGGGSCHHHHTTEEEEECSHHHHTCGGGCCEEEECCC-------HH
T ss_pred HHHHHHHHHHHHcCCEEEEEccccccccCCCCcccHHHcCccccCcEEEEEeChhhccccchheEEEEECC-------HH
Confidence 99999999999999999999999999887765555655543 4578999999999998999999999864 24
Q ss_pred HHHHHHhhcccc--CCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhc-CCCCcCCCCCCCceEEEEecCc
Q 014936 271 VVERMKKYFDIL--GDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKE-IPCISCPHKPEGSMAVMLKLNL 347 (415)
Q Consensus 271 ~~~~~~~~~~~~--~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~~~~~~~~~p~~g~~~~~~l~~ 347 (415)
+++.+....... .+++++.+.++.++|+.. .+++++.+++++++++.+.+.|++ +|++. +..|.+++++|++++.
T Consensus 257 ~~~~l~~~~~~~~~~~~~~~~~~a~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~-~~~~~~~~~~~~~~~~ 334 (399)
T 1c7n_A 257 IRERFTKSRDATSGMPFTTLGYKACEICYKEC-GKWLDGCIKVIDKNQRIVKDFFEVNHPEIK-APLIEGTYLQWIDFRA 334 (399)
T ss_dssp HHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHC-HHHHHHHHHHHHHHHHHHHHHHHHHCTTSB-CCCCSBSSEEEEECGG
T ss_pred HHHHHHHHHhhcccCCCCHHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHHHhhCCCCe-EecCCceEEEEEEccc
Confidence 777776653322 357888999888888643 578889999999999999999998 88888 4477888888998864
Q ss_pred cccCCCCCHHHHHHHHHhhcCeEEEcCCCCC--CCCeEEEEeeCChhhHHHHHHHHHHHHHHHHH
Q 014936 348 SLLDDIIDDIDFCFKLAKEESVIILPGTAVG--LKNWLRVTFAVDPYSLEECLDRIKSFYQRHAK 410 (415)
Q Consensus 348 ~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~--~~~~iRi~~~~~~~~l~~~l~~l~~~~~~~~~ 410 (415)
.. .+..++...+++++||.+.||..|+ .++++||+++.+++++++++++|+++++++.+
T Consensus 335 ~~----~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRis~~~~~~~l~~~l~~l~~~l~~~~~ 395 (399)
T 1c7n_A 335 LK----MDHKAMEEFMIHKAQIFFDEGYIFGDGGIGFERINLAAPSSVIQESLERLNKALKDLKN 395 (399)
T ss_dssp GC----CCHHHHHHHHHHTTCCCCEEGGGGCGGGTTEEEEECCSCHHHHHHHHHHHHHHHHHHC-
T ss_pred CC----CCHHHHHHHHHHhCCEEEeCccccCCCCCCeEEEEeccCHHHHHHHHHHHHHHHHHHHh
Confidence 21 1466777777657899999998886 36899999988889999999999999887543
No 30
>4dq6_A Putative pyridoxal phosphate-dependent transferas; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PLP; 1.50A {Clostridium difficile} PDB: 4dgt_A*
Probab=100.00 E-value=1.9e-46 Score=355.24 Aligned_cols=351 Identities=20% Similarity=0.346 Sum_probs=300.5
Q ss_pred CcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHH
Q 014936 34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAI 113 (415)
Q Consensus 34 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al 113 (415)
+.++++|+.|++. +++++.+.+++.+.+.... ..|++ +..++++++++++.+.+|..+++++|++|+|+++++
T Consensus 31 ~~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~~~-~~y~~--~~~~~~~~l~~~l~~~~g~~~~~~~v~~~~g~~~a~ 103 (391)
T 4dq6_A 31 TNDLLPMWVADMD----FKAAPCIIDSLKNRLEQEI-YGYTT--RPDSYNESIVNWLYRRHNWKIKSEWLIYSPGVIPAI 103 (391)
T ss_dssp CSCSEECCSSSCS----SCCCHHHHHHHHHHHTTCC-CCCBC--CCHHHHHHHHHHHHHHHCCCCCGGGEEEESCHHHHH
T ss_pred CCCceeccccCCC----CCCCHHHHHHHHHHHhCCC-CCCCC--CCHHHHHHHHHHHHHHhCCCCcHHHeEEcCChHHHH
Confidence 5789999999854 6788999999999887533 46665 568999999999998888778899999999999999
Q ss_pred HHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeecc--CCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCC
Q 014936 114 DVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLL--PDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYS 191 (415)
Q Consensus 114 ~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~--~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~ 191 (415)
.+++.++.++||+|+++.|+|+++...++..|.+++.++++ .++++.+|++++++++++ ++++++++|+||||.++|
T Consensus 104 ~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~d~~~l~~~l~~-~~~v~i~~p~nptG~~~~ 182 (391)
T 4dq6_A 104 SLLINELTKANDKIMIQEPVYSPFNSVVKNNNRELIISPLQKLENGNYIMDYEDIENKIKD-VKLFILCNPHNPVGRVWT 182 (391)
T ss_dssp HHHHHHHSCTTCEEEECSSCCTHHHHHHHHTTCEEEECCCEECTTSCEECCHHHHHHHCTT-EEEEEEESSBTTTTBCCC
T ss_pred HHHHHHhCCCCCEEEEcCCCCHHHHHHHHHcCCeEEeeeeeecCCCceEeeHHHHHHHhhc-CCEEEEECCCCCCCcCcC
Confidence 99999999999999999999999999999999999999987 345577899999999988 999999999999999999
Q ss_pred HHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCC--CCCeEEEccCccccCCCCceEEEEEeeCCCCCCChH
Q 014936 192 YQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS--TVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKP 269 (415)
Q Consensus 192 ~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~--~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~ 269 (415)
.+++++|+++|+++|+++|+||+|+++.+++....++..+.. .++++++.|+||.++++|+|+||+++++ +
T Consensus 183 ~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~-------~ 255 (391)
T 4dq6_A 183 KDELKKLGDICLKHNVKIISDEIHSDIILKKHKHIPMASISKEFEKNTITCMAPTKTFNIAGLQSSYVVLPD-------E 255 (391)
T ss_dssp HHHHHHHHHHHHHTTCEEEEECTTTTCBCTTCCCCCGGGSCHHHHHTEEEEECSHHHHTCGGGCCEEEECCS-------H
T ss_pred HHHHHHHHHHHHHcCCEEEeeccccccccCCCCccCHHHcCccccCcEEEEEechhhccCcccceEEEEeCC-------H
Confidence 999999999999999999999999999988776666666654 3678999999999999999999999864 2
Q ss_pred HHHHHHHhhcc--ccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhc-CCCCcCCCCCCCceEEEEecC
Q 014936 270 KVVERMKKYFD--ILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKE-IPCISCPHKPEGSMAVMLKLN 346 (415)
Q Consensus 270 ~~~~~~~~~~~--~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~~~~~~~~~p~~g~~~~~~l~ 346 (415)
++.+.+..... ...+++++.+.++..+++. .++++++.+++++++++.+.+.|++ +|++. +..|.+++++|++++
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~-~~~~~~~~~~~~~~~ 333 (391)
T 4dq6_A 256 KDYKLLDDAFTRIDIKRNNCFSLVATEASYNN-GESWLESFLEYLESNIDFAIKYINENMPKLK-VRKPEGTYLLWVDFS 333 (391)
T ss_dssp HHHHHHHHHHHHTTCCCCCHHHHHHHHHHHHH-CHHHHHHHHHHHHHHHHHHHHHHHHHCTTSE-ECCCSBSSEEEEECG
T ss_pred HHHHHHHHHHHhhcCCCCCHHHHHHHHHHHhc-hHHHHHHHHHHHHHHHHHHHHHHHhhCCCCE-ecCCCccEEEEEEhh
Confidence 46777766532 2346788888888888875 3577889999999999999999987 78888 547888899999886
Q ss_pred ccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCC--CCeEEEEeeCChhhHHHHHHHHHHHH
Q 014936 347 LSLLDDIIDDIDFCFKLAKEESVIILPGTAVGL--KNWLRVTFAVDPYSLEECLDRIKSFY 405 (415)
Q Consensus 347 ~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~--~~~iRi~~~~~~~~l~~~l~~l~~~~ 405 (415)
... .+..++...+++++||.+.||..|+. .+++|++++.+++++++++++|++++
T Consensus 334 ~~~----~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRis~~~~~~~i~~~l~~l~~~l 390 (391)
T 4dq6_A 334 ALG----LSDEELESILVQKGKVALNQGNSFGIGGSGYQRINLACPRSMLEEALIRIKNAI 390 (391)
T ss_dssp GGC----CCHHHHHHHHHHTTCEECEEGGGGCTTCTTEEEEECCSCHHHHHHHHHHHHHHH
T ss_pred hcC----CCHHHHHHHHHHhCCEEeeCchhhCCCCCCeEEEEEcCCHHHHHHHHHHHHHHh
Confidence 421 25677777776656999999998876 48999999999999999999998875
No 31
>2r2n_A Kynurenine/alpha-aminoadipate aminotransferase mitochondrial; alpha & beta protein, PLP-dependent transferase, aminotransf mitochondrion; HET: PMP KYN; 1.95A {Homo sapiens} PDB: 2qlr_A* 3dc1_A* 3ue8_A* 2vgz_A* 2xh1_A*
Probab=100.00 E-value=6.4e-48 Score=369.06 Aligned_cols=376 Identities=21% Similarity=0.278 Sum_probs=296.0
Q ss_pred cccCCccCCcchhhHHHHHHHhhhcccccccCcceeEecccCCCCCCCCCCcHHHHHHH---------HHHHhcCCCCCC
Q 014936 3 ISNGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAV---------AEALLSEKFNGY 73 (415)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~---------~~~~~~~~~~~y 73 (415)
+|++.....++ .+..+.....+ .++++++|+.|.|+... ++ ...+..++ .+... ....|
T Consensus 7 ~s~~~~~~~~~--~~~~~~~~~~~------~~~~~i~l~~G~p~~~~-~p-~~~~~~~~~~~~~~~~~~~~~~--~~~~Y 74 (425)
T 2r2n_A 7 ITAASAARNPS--PIRTMTDILSR------GPKSMISLAGGLPNPNM-FP-FKTAVITVENGKTIQFGEEMMK--RALQY 74 (425)
T ss_dssp SCHHHHTCCCC--SGGGHHHHHHH------SCTTCEECCCCCCCGGG-CS-EEEEEEEETTSCCEEECHHHHH--HHTSC
T ss_pred HHHHHhcCCCc--hHHHHHHHhhc------CCCCeEEcCCcCCCchh-CC-HHHHHHHHhhcccccccccchh--hhcCC
Confidence 45666666776 44444442221 13568999999987432 22 11111000 01111 12379
Q ss_pred CCCCCcHHHHHHHHHHHhhhCCCCCC-------CCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCC
Q 014936 74 APTAGLPLTRRAIAEYLSRDLPYKLT-------PNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHI 146 (415)
Q Consensus 74 ~~~~g~~~lr~~ia~~~~~~~~~~~~-------~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~ 146 (415)
+++.|++++|+++++++++.+|.... +++|++|+|+++++..++.+++++||+|+++.|+|+.+...++..|.
T Consensus 75 ~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~ 154 (425)
T 2r2n_A 75 SPSAGIPELLSWLKQLQIKLHNPPTIHYPPSQGQMDLCVTSGSQQGLCKVFEMIINPGDNVLLDEPAYSGTLQSLHPLGC 154 (425)
T ss_dssp CCTTCCHHHHHHHHHHHHHHHCCTTTTSCGGGTCEEEEEESSHHHHHHHHHHHHCCTTCEEEEESSCCHHHHHHHGGGTC
T ss_pred CCCCCCHHHHHHHHHHHHHhcCCCCccccccCCcCcEEEeCcHHHHHHHHHHHhCCCCCEEEEeCCCcHHHHHHHHHcCC
Confidence 88899999999999999887786653 37999999999999999999999999999999999999999999999
Q ss_pred eEEEeeccCCCCCCCChhHHHhhcC------------CCceEEEe-cCCCCccccCCCHHHHHHHHHHHhhcCcEEEEcc
Q 014936 147 EVRHFDLLPDKGWEVDLDDIESLAD------------QNTVALVI-INPGNPCGNVYSYQHLQKLAETANKLKTLVIADE 213 (415)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~l~~~~~------------~~~~~v~i-~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De 213 (415)
+++.++++. .++|+++|++.++ ++++++++ ++||||||.++|.+++++|+++|+++|+++|+||
T Consensus 155 ~~~~v~~~~---~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~a~~~~~~li~De 231 (425)
T 2r2n_A 155 NIINVASDE---SGIVPDSLRDILSRWKPEDAKNPQKNTPKFLYTVPNGNNPTGNSLTSERKKEIYELARKYDFLIIEDD 231 (425)
T ss_dssp EEEEECEET---TEECHHHHHHHHTTSCSTTSSSTTSCCCSEEEECCSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEC
T ss_pred EEEEeCcCC---CCCCHHHHHHHHHhhhccccccccCCCceEEEECCCCcCCCCCcCCHHHHHHHHHHHHHcCCEEEEEC
Confidence 999998753 2489999999886 35677765 6899999999999999999999999999999999
Q ss_pred ccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhhc-cccCCchhHHHHH
Q 014936 214 VYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYF-DILGDPATFIQAA 292 (415)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~a 292 (415)
+|+++.+++....++..++..+++++++||||+|+ +|+|+||+++++ ++++.+.... ..+++++++.|.+
T Consensus 232 ~~~~~~~~g~~~~~~~~~~~~~~~i~~~s~SK~~~-~GlRiG~~~~~~--------~l~~~l~~~~~~~~~~~~~~~q~a 302 (425)
T 2r2n_A 232 PYYFLQFNKFRVPTFLSMDVDGRVIRADSFSKIIS-SGLRIGFLTGPK--------PLIERVILHIQVSTLHPSTFNQLM 302 (425)
T ss_dssp TTGGGBSSSSCCCCTGGGCTTSCEEEEEESTTTTC-STTCCEEEEEEH--------HHHHHHHHHHHTTTCSSCHHHHHH
T ss_pred CcccccCCCCCCCCccccCCCCCEEEEccchhhcc-CccceEEEecCH--------HHHHHHHHHHHHhcCCCCHHHHHH
Confidence 99999888766666777766678999999999987 999999999975 6778777653 3346788999999
Q ss_pred HHHhhCCCc----HHHHHHHHHHHHHHHHHHHHHhhc-CCCCcCCCCCCCceEEEEecCccccCCCCCHHHHHHHHHhhc
Q 014936 293 VPSILQQPD----EVFFKKTLNLLKQSVDICYNKIKE-IPCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEE 367 (415)
Q Consensus 293 ~~~~l~~~~----~~~~~~~~~~~~~~~~~l~~~l~~-~~~~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~ 367 (415)
+.++|+... .+++++.+++++++++.+.+.|++ +|++..+..|.+|+|+|++++.. .+..+++...+.++
T Consensus 303 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~p~~g~~~~~~~~~~-----~~~~~~~~~~l~~~ 377 (425)
T 2r2n_A 303 ISQLLHEWGEEGFMAHVDRVIDFYSNQKDAILAAADKWLTGLAEWHVPAAGMFLWIKVKGI-----NDVKELIEEKAVKM 377 (425)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSSEEECCCSBSSEEEEEETTC-----SCCHHHHHTHHHHT
T ss_pred HHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCeEEeCCCceEEEEEEeCCC-----CCHHHHHHHHHHHC
Confidence 999987521 366788889999999999999987 67763244789999999998642 13455445556788
Q ss_pred CeEEEcCCCCCC-----CCeEEEEee-CChhhHHHHHHHHHHHHHH
Q 014936 368 SVIILPGTAVGL-----KNWLRVTFA-VDPYSLEECLDRIKSFYQR 407 (415)
Q Consensus 368 gi~v~~g~~~~~-----~~~iRi~~~-~~~~~l~~~l~~l~~~~~~ 407 (415)
||.+.||..|+. .+++||+++ .+++++++++++|++++++
T Consensus 378 gv~v~pg~~f~~~~~~~~~~iRis~~~~~~~~i~~~~~~l~~~l~~ 423 (425)
T 2r2n_A 378 GVLMLPGNAFYVDSSAPSPYLRASFSSASPEQMDVAFQVLAQLIKE 423 (425)
T ss_dssp TEECEEGGGGSSSTTSCCCEEEEECSSCCHHHHHHHHHHHHHHHHH
T ss_pred CcEEechhhhcCCCCCCCCEEEEEeCCCCHHHHHHHHHHHHHHHHH
Confidence 999999998864 479999997 7899999999999998865
No 32
>3qgu_A LL-diaminopimelate aminotransferase; L-lysine, pyridoxal-5' phosphate, chamydomonas reinhardtii; HET: GOL; 1.55A {Chlamydomonas reinhardtii}
Probab=100.00 E-value=4.2e-47 Score=366.16 Aligned_cols=356 Identities=18% Similarity=0.263 Sum_probs=291.9
Q ss_pred cCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhc----CCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCC
Q 014936 33 NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLS----EKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSG 108 (415)
Q Consensus 33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~----~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g 108 (415)
.++++|+|+.|+++ +++++.+++++.+.+.. .....|++..|..+||+++++++. +|+++++++|++|+|
T Consensus 67 ~~~~~i~l~~g~~~----~~~~~~v~~a~~~~~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~--~g~~~~~~~i~~t~G 140 (449)
T 3qgu_A 67 PDAKIISLGIGDTT----EPLPKYIADAMAKAAAGLATREGYSGYGAEQGQGALREAVASTFY--GHAGRAADEIFISDG 140 (449)
T ss_dssp TTCCCEECSSCCCC----CCCCHHHHHHHHHHHHGGGGSCCCCCSTTTTCCHHHHHHHHHHHH--TTTTCCGGGEEEESC
T ss_pred CCCCEEEeeCCCCC----CCCCHHHHHHHHHHHHhhccccCCCCCCCCCCcHHHHHHHHHHHH--cCCCCCHHHEEEccC
Confidence 36789999999864 67789999999998873 344589888899999999999997 777788999999999
Q ss_pred hHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCe----------EEEeeccCCCCCCCChhHHHhhcCCCceEEE
Q 014936 109 CTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIE----------VRHFDLLPDKGWEVDLDDIESLADQNTVALV 178 (415)
Q Consensus 109 ~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~----------~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~ 178 (415)
+++++..+ ..++++||+|+++.|+|+++...++..|.+ +..+++++++++..+++++ +++++|+
T Consensus 141 ~~~al~~~-~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~v~ 214 (449)
T 3qgu_A 141 SKCDIARI-QMMFGSKPTVAVQDPSYPVYVDTSVMMGMTGDHNGTGFDGIEYMVCNPDNHFFPDLSKA-----KRTDIIF 214 (449)
T ss_dssp HHHHHHHH-HHHHCSSSCEEEEESCCTHHHHHHHHHTCSCCBCSSSBTTEEEEECCGGGTTCCCGGGC-----CCCSEEE
T ss_pred HHHHHHHH-HHHhCCCCEEEEcCCCChhHHHHHHHcCCcccccccccceeEEEecccccCCcCChhHc-----CCCCEEE
Confidence 99999998 788899999999999999999999999998 9999987655555555432 5788999
Q ss_pred ecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCC-CCCeEEEccCccccCCCCceEEEE
Q 014936 179 IINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS-TVPILTLGSLSKRWIVPGWRLGWF 257 (415)
Q Consensus 179 i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~~~~G~r~G~~ 257 (415)
+++|+||||.+++.+++++|+++|+++|+++|+||+|+++.+++....++..++. .++++++.|+||.|+++|+|+||+
T Consensus 215 l~~p~NPtG~~~~~~~l~~l~~l~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~ 294 (449)
T 3qgu_A 215 FCSPNNPTGAAATRAQLTELVNFARKNGSILVYDAAYALYISNPDCPKTIYEIPGADEVAIETCSFSKYAGFTGVRLGWT 294 (449)
T ss_dssp EESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCCTTSCSSGGGSTTGGGTEEEEEECSGGGTCTTCCCEEE
T ss_pred EeCCCCCCCCcCCHHHHHHHHHHHHHCCcEEEEEcchHhhhcCCCCCCCHhhccCCCCcEEEEecchhhcCCccceeEEE
Confidence 9999999999999999999999999999999999999999988766666665543 456899999999999999999999
Q ss_pred EeeCCCCCCChHHHHHHHHhhc-cccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCC
Q 014936 258 VTTDPCGMFRKPKVVERMKKYF-DILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPE 336 (415)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~ 336 (415)
+++++........+...+.... ..+.+++++.|.++..++.....+++++.+++++++++++.+.|+++ ++. +..|.
T Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~~ 372 (449)
T 3qgu_A 295 VVPKALKYANGEPVHADWNRVMTTCFNGASNIVQAGGLACLQPEGLKEMNAMIKFYKENAQILKTTFTEM-GFS-VYGGD 372 (449)
T ss_dssp ECCTTCBCTTSCBHHHHHHHHHHHSCCCCCHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TCC-EEESS
T ss_pred ecCHHHHhhhhhhHHHHHHHHhhcccCCCCHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHC-CCe-eeCCC
Confidence 9976321000000122333332 22357788999999999875334678899999999999999999988 777 44778
Q ss_pred CceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCC--CCeEEEEeeCChhhHHHHHHHHHHHHHHH
Q 014936 337 GSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGL--KNWLRVTFAVDPYSLEECLDRIKSFYQRH 408 (415)
Q Consensus 337 ~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~--~~~iRi~~~~~~~~l~~~l~~l~~~~~~~ 408 (415)
+++|+|+.++. .+..+++..+++++||.+.||..|+. +++|||++..+++++++++++|++++++.
T Consensus 373 ~~~~~~~~~~~------~~~~~~~~~l~~~~gI~v~pg~~f~~~~~~~iRis~~~~~e~i~~~l~~l~~~~~~~ 440 (449)
T 3qgu_A 373 DAPYIWVGFPG------KPSWDVFAEILERCNIVTTPGSGYGPAGEGFVRASAFGSRENILEAVRRFKEAYGKR 440 (449)
T ss_dssp SSSEEEEECTT------SCHHHHHHHHHHHHCEECEEGGGGCGGGTTEEEEECCSCHHHHHHHHHHHHHHHC--
T ss_pred CeeEEEEECCC------CCHHHHHHHHHHHCCEEEecchHhCCCCCCeEEEEecCCHHHHHHHHHHHHHHHHhc
Confidence 89999998861 25778888888878999999998875 68999999889999999999999988653
No 33
>3k7y_A Aspartate aminotransferase; aminotrans pyridoxal phosphate; HET: PLP; 2.80A {Plasmodium falciparum} SCOP: c.67.1.0
Probab=100.00 E-value=1.2e-46 Score=355.27 Aligned_cols=368 Identities=13% Similarity=0.095 Sum_probs=284.4
Q ss_pred cCCccCCcchhhHHHHHHHhhhcccccccCcceeEecccCC-CCCCCCCCcHHHHHHHHHHH-hcCCCCCCCCCCCcHHH
Q 014936 5 NGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDP-TVHSCFHTTHVATEAVAEAL-LSEKFNGYAPTAGLPLT 82 (415)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~-~~~~~~~~~~~~~~a~~~~~-~~~~~~~y~~~~g~~~l 82 (415)
.+....+++ ++..+.....+.. ..++|||+.|.+ +..+.+++++.++++.. .+ ..+....|++..|.++|
T Consensus 6 ~~~~~~~~~--~i~~~~~~~~~~~-----~~~~I~l~~G~~~d~~~~~~~~~~v~~a~~-~~~~~~~~~~Y~~~~G~~~l 77 (405)
T 3k7y_A 6 SSLENIEVD--NILKTAREFKEDT-----CEEKINLSIGVCCNDDGDLHIFDSVLNADK-LVTENYKEKPYLLGNGTEDF 77 (405)
T ss_dssp GGCCCCCCC--HHHHHHHHHTTSS-----CSSCEECSCSSCBCTTSSBCCCHHHHHHHH-HHHHHCCCCCCCTTSSCHHH
T ss_pred hcCCCCCCC--hHHHHHHHHhcCC-----CcCcEEeeeeeeECCCCCCcccHHHHHHHH-HhcCCCCCCCCCCCCCcHHH
Confidence 344555666 6666666555443 467899999973 33334567889999887 44 33445689999999999
Q ss_pred HHHHHHHHhhhCCCCCCCCc--EEEeCChHHHHHHHHHHhcC--CCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCC
Q 014936 83 RRAIAEYLSRDLPYKLTPND--VFVTSGCTQAIDVAMALLSR--PGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKG 158 (415)
Q Consensus 83 r~~ia~~~~~~~~~~~~~~~--i~i~~g~~~al~~~~~~l~~--~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~ 158 (415)
|+++++|+.+..+..+++++ +++|+|+++++.+++.++.+ + |+|++++|+|+.|...++..|++++.++...+++
T Consensus 78 r~aia~~~~~~~~~~~~~~~i~i~~t~G~~~al~~~~~~l~~~~~-d~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~ 156 (405)
T 3k7y_A 78 STLTQNLIFGNNSKYIEDKKICTIQCIGGTGAIFVLLEFLKMLNV-ETLYVTNPPYINHVNMIESRGFNLKYINFFDYNL 156 (405)
T ss_dssp HHHHHHHHHCSSCTTTTTTCEEEEEEEHHHHHHHHHHHHHHTTTC-CEEEEESSCCHHHHHHHHTTTCEEEEECCEETTT
T ss_pred HHHHHHHHcCCCCccccccceEEEEcCchHHHHHHHHHHHHhcCC-CEEEEeCCCCHhHHHHHHHcCCeEEEEecccccc
Confidence 99999999765555566664 59999999999999999987 8 9999999999999999999999999998754456
Q ss_pred CCCChhHHHhhcCC--CceEEEecCC-CCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCC--ccccccc-C
Q 014936 159 WEVDLDDIESLADQ--NTVALVIINP-GNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKP--FVPMGVF-G 232 (415)
Q Consensus 159 ~~~~~~~l~~~~~~--~~~~v~i~~p-~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~--~~~~~~~-~ 232 (415)
+++|++.+++.+++ .+++++++.| |||||.+++.+++++|+++|++||+++|+||+|.++.+++.. ..++..+ .
T Consensus 157 ~~~d~~~l~~~l~~~~~~~~i~l~~~~~NPTG~~~s~~~~~~l~~~~~~~~~~vi~De~Y~~l~~~~~~~~~~~~~~~~~ 236 (405)
T 3k7y_A 157 IDINYDLFLNDLRNIPNGSSVILQISCYNPCSVNIEEKYFDEIIEIVLHKKHVIIFDIAYQGFGHTNLEEDVLLIRKFEE 236 (405)
T ss_dssp TEECHHHHHHHHHHSCSSCEEEECCSSCTTTCCCCCHHHHHHHHHHHHHHCCEEEEEESCTTTSSSSTTGGGHHHHHHHT
T ss_pred CCcCHHHHHHHHHhCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCeEEEEecCcccccCCCcccchHHHHHHHh
Confidence 88999999998863 4567777665 899999999999999999999999999999999998876421 1222222 2
Q ss_pred CCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHH----hh-ccccCCchhHHHHHHHHhhCCCc-----H
Q 014936 233 STVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMK----KY-FDILGDPATFIQAAVPSILQQPD-----E 302 (415)
Q Consensus 233 ~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~----~~-~~~~~~~~~~~~~a~~~~l~~~~-----~ 302 (415)
..+++|+++||||.|+++|+|+||+++... ++++++.+. .. .....+++.++|.++..+|.+.. .
T Consensus 237 ~~~~~i~~~S~SK~~~l~GlRiG~~~~~~~-----~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~l~~~~~ 311 (405)
T 3k7y_A 237 KNIAFSVCQSFSKNMSLYGERAGALHIVCK-----NQEEKKIVFNNLCFIVRKFYSSPVIHTNRILCQLLNNQNLKLNWI 311 (405)
T ss_dssp TTCCEEEEEECTTTSCCTTTTEEEEEEECS-----SHHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHHCHHHHHHHH
T ss_pred cCCcEEEEeeCCccCCCccccceEEEEEeC-----CHHHHHHHHHHHHHHHhcccCCCcHHHHHHHHHHhCCHHHHHHHH
Confidence 346899999999999999999999975321 124554443 22 12234567788989888887631 2
Q ss_pred HHHHHHHHHHHHHHHHHHHHhh----cCC---CCcCCCCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCC
Q 014936 303 VFFKKTLNLLKQSVDICYNKIK----EIP---CISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGT 375 (415)
Q Consensus 303 ~~~~~~~~~~~~~~~~l~~~l~----~~~---~~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~ 375 (415)
+++++.+++++++|+.+.+.|+ +++ ++. +..|++|+|+|++++. +++..+ +++||.+.||.
T Consensus 312 ~~l~~~~~~~~~~R~~l~~~L~~~~~~~g~~~~~~-~~~p~gg~f~~~~l~~----------~~~~~L-~~~gV~v~p~~ 379 (405)
T 3k7y_A 312 KELSQLSQRITNNRILFFNKLETYQKKYNLNYDWN-VYKKQRGLFSFVPLLA----------KIAEHL-KTHHIYIINNG 379 (405)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCGG-GGSSCCSSEEECGGGG----------GGTTTT-TTTTEECCTTS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCc-cccCCceEEEecCCCH----------HHHHHH-HHCCEeecCCC
Confidence 4456677889999999999999 762 156 4489999999987752 334556 88999999963
Q ss_pred CCCCCCeEEEEee-CChhhHHHHHHHHHHHHH
Q 014936 376 AVGLKNWLRVTFA-VDPYSLEECLDRIKSFYQ 406 (415)
Q Consensus 376 ~~~~~~~iRi~~~-~~~~~l~~~l~~l~~~~~ 406 (415)
|||++ .++++++.++++|+++++
T Consensus 380 --------Ris~a~~~~~~i~~~~~~i~~~~~ 403 (405)
T 3k7y_A 380 --------RINVSGITKNNVDYIADKICLSLS 403 (405)
T ss_dssp --------EEEGGGCCTTHHHHHHHHHHHHHH
T ss_pred --------eEEEeccCHHHHHHHHHHHHHHHh
Confidence 99995 689999999999999875
No 34
>2gb3_A Aspartate aminotransferase; TM1698, structural genomics, PSI structure initiative, joint center for structural genomics; HET: LLP; 2.50A {Thermotoga maritima} SCOP: c.67.1.1
Probab=100.00 E-value=4e-46 Score=354.93 Aligned_cols=376 Identities=23% Similarity=0.385 Sum_probs=306.3
Q ss_pred cccCCccCCcchhhHHHHHHHhhhcccccccCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHH
Q 014936 3 ISNGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLT 82 (415)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~l 82 (415)
++.+....+++ .+..+...+.+.. ..++++++|+.|.+. +++++.+++++ +.+... ...|++..|..++
T Consensus 16 ~~~~~~~~~~~--~~~~~~~~~~~~~---~~g~~~i~l~~~~~~----~~~~~~v~~a~-~~l~~~-~~~y~~~~g~~~l 84 (409)
T 2gb3_A 16 FSDRVLLTEES--PIRKLVPFAEMAK---KRGVRIHHLNIGQPD----LKTPEVFFERI-YENKPE-VVYYSHSAGIWEL 84 (409)
T ss_dssp CCHHHHSCCCC--TTGGGHHHHHHHH---HTTCEEEECSSCCCC----SCCCTHHHHHH-HHTCCS-SCCCCCTTCCHHH
T ss_pred HHHHhhcCCcc--HHHHHHHHHHHHH---hcCCCEEeccCCCCC----CCCCHHHHHHH-HHHhcC-CCCCCCCCCcHHH
Confidence 45555566666 3333333322222 236789999999864 55678899999 887653 3578888889999
Q ss_pred HHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCC
Q 014936 83 RRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVD 162 (415)
Q Consensus 83 r~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 162 (415)
|+++++++++.+|.+++++++++|+|+++++..++.++.++||+|+++.|+|+++...++..|.+++.++.++++++.+
T Consensus 85 ~~~la~~~~~~~g~~~~~~~v~~~~g~t~a~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~- 163 (409)
T 2gb3_A 85 REAFASYYKRRQRVDVKPENVLVTNGGSEAILFSFAVIANPGDEILVLEPFYANYNAFAKIAGVKLIPVTRRMEEGFAI- 163 (409)
T ss_dssp HHHHHHHHHHTSCCCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTHHHHHHHHHTCEEEEEECCGGGTSCC-
T ss_pred HHHHHHHHHHHhCCCCCHHHEEEeCCHHHHHHHHHHHhCCCCCEEEEcCCCchhHHHHHHHcCCEEEEeccCCCCCCcc-
Confidence 9999999998888888889999999999999999999999999999999999999999999999999999865345555
Q ss_pred hhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccC-CCCCeEEEc
Q 014936 163 LDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFG-STVPILTLG 241 (415)
Q Consensus 163 ~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~-~~~~~i~~~ 241 (415)
+++|+++++++++++++++|+||||.++|.+++++|+++|+++|+++|+||+|+++.+++. ..++ +. ..+++++++
T Consensus 164 ~~~l~~~l~~~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~Dea~~~~~~~~~-~~~~--~~~~~~~~i~~~ 240 (409)
T 2gb3_A 164 PQNLESFINERTKGIVLSNPCNPTGVVYGKDEMRYLVEIAERHGLFLIVDEVYSEIVFRGE-FASA--LSIESDKVVVID 240 (409)
T ss_dssp CTTGGGGCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSC-CCCG--GGSCCTTEEEEE
T ss_pred HHHHHHhhCcCCeEEEECCCCCCCCCCcCHHHHHHHHHHHHHcCCEEEEECcccccccCCC-CCCc--cccCCCCEEEEe
Confidence 8999999988899999999999999999999999999999999999999999999887653 2222 21 134679999
Q ss_pred cCccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhhcc-ccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHH
Q 014936 242 SLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFD-ILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICY 320 (415)
Q Consensus 242 s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~ 320 (415)
|+||.++++|+|+||+++++ +++++.+..... .+ +++++.+.++.++|+. ...++++.+++++++++.+.
T Consensus 241 s~sK~~g~~G~r~G~~~~~~-------~~l~~~l~~~~~~~~-~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~~l~ 311 (409)
T 2gb3_A 241 SVSKKFSACGARVGCLITRN-------EELISHAMKLAQGRL-APPLLEQIGSVGLLNL-DDSFFDFVRETYRERVETVL 311 (409)
T ss_dssp ESTTTTTCGGGCCEEEECSC-------HHHHHHHHHHHHHSC-CCCHHHHHHHHHHHTC-CHHHHHHHHHHHHHHHHHHH
T ss_pred cchhccCCccceEEEEEECc-------HHHHHHHHHHHhccC-CCCHHHHHHHHHHHhc-cHHHHHHHHHHHHHHHHHHH
Confidence 99999988999999999864 146677665532 23 7788999999999975 36778899999999999999
Q ss_pred HHhhcCCCCcCCCCCCCceEEEEecCccccCCCCCHHHHHHHHHhh-----cCeEEEcCCCCCC-----CCeEEEEeeCC
Q 014936 321 NKIKEIPCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKE-----ESVIILPGTAVGL-----KNWLRVTFAVD 390 (415)
Q Consensus 321 ~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~-----~gi~v~~g~~~~~-----~~~iRi~~~~~ 390 (415)
+.|+++ ++..+..|.+|+++|++++. .+..++...++++ +||.+.||..|+. ++++||+++.+
T Consensus 312 ~~L~~~-g~~~~~~~~~~~~~~~~~~~------~~~~~l~~~l~~~~~~~~~gi~v~~g~~f~~~~~~~~~~iRis~~~~ 384 (409)
T 2gb3_A 312 KKLEEH-GLKRFTKPSGAFYITAELPV------EDAEEFARWMLTDFNMDGETTMVAPLRGFYLTPGLGKKEIRIACVLE 384 (409)
T ss_dssp HHHHHT-TCCCBCCCSBSSEEEEECSS------SCHHHHHHHHHHSCCBTTEEEECEEGGGGCSSTTTTSSEEEEECCSC
T ss_pred HHHHHc-CceeeeCCCeeEEEEEEeCC------CCHHHHHHHHHhccccccCcEEEeCchHhCCCCCCCCCEEEEEeCCC
Confidence 999988 77731478889999988861 2567777777665 5999999988753 57999999999
Q ss_pred hhhHHHHHHHHHHHHHHHH
Q 014936 391 PYSLEECLDRIKSFYQRHA 409 (415)
Q Consensus 391 ~~~l~~~l~~l~~~~~~~~ 409 (415)
++++++++++|+++++++.
T Consensus 385 ~e~i~~~~~~l~~~l~~~~ 403 (409)
T 2gb3_A 385 KDLLSRAIDVLMEGLKMFC 403 (409)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhh
Confidence 9999999999999998764
No 35
>2zc0_A Alanine glyoxylate transaminase; alanine:glyoxylate aminotransferase, archaea, thermococcus L transferase; HET: PMP; 2.30A {Thermococcus litoralis}
Probab=100.00 E-value=4.2e-46 Score=354.76 Aligned_cols=381 Identities=23% Similarity=0.349 Sum_probs=308.0
Q ss_pred cccCCccCCcchhhHHHHHHHhhhcccccccCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcC--CCCCCCCCCCcH
Q 014936 3 ISNGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSE--KFNGYAPTAGLP 80 (415)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~--~~~~y~~~~g~~ 80 (415)
+|++.....++ .+..+.....+.. ..|++++||+.|.|+.. ..+++.+.+++.+.+... ... |+++.|..
T Consensus 7 ~~~~~~~~~~~--~~~~~~~~~~~~~---~~g~~~idl~~g~~~~~--~~~~~~v~~a~~~~~~~~~~~~~-y~~~~~~~ 78 (407)
T 2zc0_A 7 LAGRANWIKGS--ALADVMKKASELQ---KKGVKLISLAAGDPDPE--LIPRAVLGEIAKEVLEKEPKSVM-YTPANGIP 78 (407)
T ss_dssp SCGGGGGCCCC--HHHHHHHHHHHHH---HSSCCCEECCSCCCCTT--TSCHHHHHHHHHHHHHHCGGGGS-CCCTTCCH
T ss_pred hhhhhccCCch--HHHHHHHhhhccc---CCCCceEeCCCCCCCch--hCCHHHHHHHHHHHHhhcccccc-CCCCCCCH
Confidence 56666666666 4555554322111 12557899999987632 346788999999888653 234 88878999
Q ss_pred HHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCC
Q 014936 81 LTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWE 160 (415)
Q Consensus 81 ~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~ 160 (415)
++|+++++++.+.+|..+++++|++|+|+++++.+++.++.++||+|+++.|+|+++...++..|.++..++.+++ +
T Consensus 79 ~l~~~la~~~~~~~g~~~~~~~v~~t~g~t~a~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~---~ 155 (407)
T 2zc0_A 79 ELREELAAFLKKYDHLEVSPENIVITIGGTGALDLLGRVLIDPGDVVITENPSYINTLLAFEQLGAKIEGVPVDND---G 155 (407)
T ss_dssp HHHHHHHHHHHHHSCCCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHTTTCEEEEEEEETT---E
T ss_pred HHHHHHHHHHHHhcCCCCCcceEEEecCHHHHHHHHHHHhcCCCCEEEEeCCChHHHHHHHHHcCCEEEEcccCCC---C
Confidence 9999999999887787788899999999999999999999999999999999999999999999999999987542 3
Q ss_pred CChhHHHhhcC----C--CceEE-EecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCC
Q 014936 161 VDLDDIESLAD----Q--NTVAL-VIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS 233 (415)
Q Consensus 161 ~~~~~l~~~~~----~--~~~~v-~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~ 233 (415)
+|+++|+++++ + ++++| ++++|+||||.++|.+++++|+++|+++|+++|+||+|+.+.+++....++..++.
T Consensus 156 ~d~~~l~~~l~~~~~~~~~~~~v~~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~ 235 (407)
T 2zc0_A 156 MRVDLLEEKIKELKAKGQKVKLIYTIPTGQNPMGVTMSMERRKALLEIASKYDLLIIEDTAYNFMRYEGGDIVPLKALDN 235 (407)
T ss_dssp ECHHHHHHHHHHHHHTTCCEEEEEECCSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTSBSSCSSCCCGGGGCS
T ss_pred CCHHHHHHHHHhhhcccCCceEEEECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEECCCcccccCCCCCCChhhcCC
Confidence 89999999887 5 67776 57899999999999999999999999999999999999998887665555666655
Q ss_pred CCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhhcc-ccCCchhHHHHHHHHhhCCCc-H-HHHHHHHH
Q 014936 234 TVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFD-ILGDPATFIQAAVPSILQQPD-E-VFFKKTLN 310 (415)
Q Consensus 234 ~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~a~~~~l~~~~-~-~~~~~~~~ 310 (415)
.+++++++|+||.++ +|+|+||+++++ ++++.+..... .+.+++++.+.++..+|+... + .++++.++
T Consensus 236 ~~~~i~~~s~sK~~~-~G~r~G~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 306 (407)
T 2zc0_A 236 EGRVIVAGTLSKVLG-TGFRIGWIIAEG--------EILKKVLMQKQPIDFCAPAISQYIALEYLKRGYFEKYHLEGALL 306 (407)
T ss_dssp SCCEEEEEESTTTTC-TTSCCEEEECCH--------HHHHHHHHHHTTTTSSSCHHHHHHHHHHHHTTHHHHHTTTTHHH
T ss_pred CCCEEEEcccccccC-CCcceEEEecCH--------HHHHHHHHHHHhhcCCCCHHHHHHHHHHHHcCCchHHHHHHHHH
Confidence 567899999999988 999999999864 67777766532 335568889999999997642 3 56778888
Q ss_pred HHHHHHHHHHHHhhc-CCCCcCCCCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCC----CCeEEE
Q 014936 311 LLKQSVDICYNKIKE-IPCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGL----KNWLRV 385 (415)
Q Consensus 311 ~~~~~~~~l~~~l~~-~~~~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~----~~~iRi 385 (415)
+++++++.+.+.|++ +|++. +..|.+|+|+|++++.. .+..++...+++++||.+.||..|.. .+++||
T Consensus 307 ~~~~~~~~l~~~L~~~~~~~~-~~~~~~~~~~~~~~~~~-----~~~~~l~~~l~~~~gi~v~~g~~~~~~~~~~~~iRi 380 (407)
T 2zc0_A 307 GYKEKRDIMLKALENHLPNAE-FTKPIAGMFVMFFLPEG-----ADGISFANELMEREGVVVVPGKPFYTDESGKNAIRL 380 (407)
T ss_dssp HHHHHHHHHHHHHHHHCTTSC-BCCCSBSSEEEEECSTT-----CCHHHHHHHHHHHTCEECBCSGGGCSSSCCTTEEEE
T ss_pred HHHHHHHHHHHHHHHhCCCCE-EecCCCcEEEEEEcCCC-----CCHHHHHHHHHHhCCeEEECchhccCCCCCCCeEEE
Confidence 999999999999987 57777 44678899999998641 24667777776656999999988753 579999
Q ss_pred EeeC-ChhhHHHHHHHHHHHHHHHH
Q 014936 386 TFAV-DPYSLEECLDRIKSFYQRHA 409 (415)
Q Consensus 386 ~~~~-~~~~l~~~l~~l~~~~~~~~ 409 (415)
+++. +++++++++++|+++++++.
T Consensus 381 s~~~~~~~~i~~~~~~l~~~l~~~~ 405 (407)
T 2zc0_A 381 NFSRPSKEEIPIGIKKLAKLYKEKF 405 (407)
T ss_dssp ECSSSCTTHHHHHHHHHHHHHHHHC
T ss_pred EeCCCCHHHHHHHHHHHHHHHHHHh
Confidence 9975 78999999999999987654
No 36
>1d2f_A MALY protein; aminotransferase fold, large PLP-binding domain, small C-TER domain, open alpha-beta structure., transferase; HET: PLP; 2.50A {Escherichia coli} SCOP: c.67.1.3
Probab=100.00 E-value=2.9e-46 Score=353.79 Aligned_cols=353 Identities=19% Similarity=0.282 Sum_probs=293.0
Q ss_pred cceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHH-HHHHHHHHHhhhCCCCCCCCcEEEeCChHHHH
Q 014936 35 KKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPL-TRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAI 113 (415)
Q Consensus 35 ~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~-lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al 113 (415)
++++||+.|++. +++++.+.+++.+.+... ...|++. ..+ +|+++++++++.+|..+++++|++|+|+++++
T Consensus 28 ~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~~-~~~y~~~--~~~~lr~~la~~l~~~~g~~~~~~~v~~t~g~~~al 100 (390)
T 1d2f_A 28 ADLLPFTISDMD----FATAPCIIEALNQRLMHG-VFGYSRW--KNDEFLAAIAHWFSTQHYTAIDSQTVVYGPSVIYMV 100 (390)
T ss_dssp --CEECCSSSCS----SCCCHHHHHHHHHHHTTC-CCCCCCS--CCHHHHHHHHHHHHHHSCCCCCGGGEEEESCHHHHH
T ss_pred CCeeEeeecCCC----CCCCHHHHHHHHHHHhCC-CCCCCCC--ChHHHHHHHHHHHHHhcCCCCCHHHEEEcCCHHHHH
Confidence 478999999864 667899999999988653 3478774 678 99999999998888778899999999999999
Q ss_pred HHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCC-CCCCChhHHHhhcCC-CceEEEecCCCCccccCCC
Q 014936 114 DVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDK-GWEVDLDDIESLADQ-NTVALVIINPGNPCGNVYS 191 (415)
Q Consensus 114 ~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~-~~~~~~~~l~~~~~~-~~~~v~i~~p~nptG~~~~ 191 (415)
.+++.++.++||+|+++.|+|+++...++..|.+++.++.++++ +|.+|+++|++++++ +++++++++|+||||.++|
T Consensus 101 ~~~~~~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~l~~~~~~~v~l~~p~nptG~~~~ 180 (390)
T 1d2f_A 101 SELIRQWSETGEGVVIHTPAYDAFYKAIEGNQRTVMPVALEKQADGWFCDMGKLEAVLAKPECKIMLLCSPQNPTGKVWT 180 (390)
T ss_dssp HHHHHHSSCTTCEEEEEESCCHHHHHHHHHTTCEEEEEECEECSSSEECCHHHHHHHHTSTTEEEEEEESSCTTTCCCCC
T ss_pred HHHHHHhcCCCCEEEEcCCCcHHHHHHHHHCCCEEEEeecccCCCccccCHHHHHHHhccCCCeEEEEeCCCCCCCcCcC
Confidence 99999999999999999999999999999999999999886543 466899999999876 7889999999999999999
Q ss_pred HHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHH
Q 014936 192 YQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKV 271 (415)
Q Consensus 192 ~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~ 271 (415)
.+++++|+++|+++|+++|+||+|+.+.+++....++..+.....-. +.|+||.|+++|+|+||+++++ +++
T Consensus 181 ~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~d~-~~s~sK~~~~~G~r~G~~~~~~-------~~~ 252 (390)
T 1d2f_A 181 CDELEIMADLCERHGVRVISDEIHMDMVWGEQPHIPWSNVARGDWAL-LTSGSKSFNIPALTGAYGIIEN-------SSS 252 (390)
T ss_dssp TTHHHHHHHHHHHTTCEEEEECTTTTCBCSSSCCCCGGGTCCSSEEE-EECSHHHHTCGGGCCEEEEECS-------HHH
T ss_pred HHHHHHHHHHHHHcCCEEEEEccccccccCCCCCcCHHHcchhhHhh-ccCccHhhcccChhheEEEECC-------HHH
Confidence 99999999999999999999999999988766555555554321013 8899999988999999999864 257
Q ss_pred HHHHHhhcc--cc-CCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhc-CCCCcCCCCCCCceEEEEecCc
Q 014936 272 VERMKKYFD--IL-GDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKE-IPCISCPHKPEGSMAVMLKLNL 347 (415)
Q Consensus 272 ~~~~~~~~~--~~-~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~~~~~~~~~p~~g~~~~~~l~~ 347 (415)
.+.+..... .. ++++++.+.++.++++.. ++++++.+++++++++.+.+.|++ +|++. +..|.+++++|++++.
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~-~~~~~~~~~~~~~~~~ 330 (390)
T 1d2f_A 253 RDAYLSALKGRDGLSSPSVLALTAHIAAYQQG-APWLDALRIYLKDNLTYIADKMNAAFPELN-WQIPQSTYLAWLDLRP 330 (390)
T ss_dssp HHHHHHHHHTTSCCCSCCHHHHHHHHHHHHHC-HHHHHHHHHHHHHHHHHHHHHHHHHCSSCC-CCCCSBCSEEEEECGG
T ss_pred HHHHHHHHhhhcccCCCCHHHHHHHHHHHhcC-HHHHHHHHHHHHHHHHHHHHHHHhhCCCCE-EecCCccEEEEEEccc
Confidence 777765532 23 367888888888888642 567889999999999999999998 88887 4477788888998864
Q ss_pred cccCCCCCHHHHHHHHHhhcCeEEEcCCCCCC--CCeEEEEeeCChhhHHHHHHHHHHHHHHH
Q 014936 348 SLLDDIIDDIDFCFKLAKEESVIILPGTAVGL--KNWLRVTFAVDPYSLEECLDRIKSFYQRH 408 (415)
Q Consensus 348 ~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~--~~~iRi~~~~~~~~l~~~l~~l~~~~~~~ 408 (415)
.. .+..++...+++++||.+.||..|+. ++++||+++.+++++++++++|+++++++
T Consensus 331 ~~----~~~~~l~~~l~~~~gi~v~~g~~f~~~~~~~~Ris~~~~~~~l~~~l~~l~~~l~~~ 389 (390)
T 1d2f_A 331 LN----IDDNALQKALIEQEKVAIMPGYTYGEEGRGFVRLNAGCPRSKLEKGVAGLINAIRAV 389 (390)
T ss_dssp GC----CCHHHHHHHHHHTTCEECEEGGGGCGGGTTEEEEECCSCHHHHHHHHHHHHHHHHHH
T ss_pred cC----CCHHHHHHHHHHHcCEEeeCccccCCCCCCeEEEEecCCHHHHHHHHHHHHHHHHhh
Confidence 21 14667777776578999999998863 68999999888899999999999998764
No 37
>3piu_A 1-aminocyclopropane-1-carboxylate synthase; fruit ripening, ethylene biosynthesis, lyase, pyridoxal 5'-P binding; HET: LLP PLR; 1.35A {Malus domestica} SCOP: c.67.1.4 PDB: 1m4n_A* 1m7y_A* 1ynu_A* 1b8g_A*
Probab=100.00 E-value=1.3e-46 Score=361.17 Aligned_cols=375 Identities=19% Similarity=0.305 Sum_probs=303.0
Q ss_pred HHHHh-hhcccccccCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCC-----------CCCCCCCCCcHHHHHHHH
Q 014936 20 MLSLL-MQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEK-----------FNGYAPTAGLPLTRRAIA 87 (415)
Q Consensus 20 ~~~~~-~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~-----------~~~y~~~~g~~~lr~~ia 87 (415)
.+..+ .+.++++.++..+++|+.+.. ...++.+.+++.+...... ...|++..|.++||++++
T Consensus 22 ~~~~~~~~~y~~~~~p~~~i~lg~~~~-----~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~y~~~~g~~~l~~~la 96 (435)
T 3piu_A 22 GWQEYEKNPYHEVHNTNGIIQMGLAEN-----QLCFDLLESWLAKNPEAAAFKKNGESIFAELALFQDYHGLPAFKKAMV 96 (435)
T ss_dssp HHHHHHHSBCBTTTBTTSBEECSSCCC-----CSSHHHHHHHHHHCTTGGGTEETTEECHHHHHHCCCTTCCHHHHHHHH
T ss_pred HHHHhhcCCCCcccCCCCeEEeccccc-----cccHHHHHHHHHhCccccccccccccccccccccCCCCCcHHHHHHHH
Confidence 44444 455676677778999999763 3347888888877544221 146998899999999999
Q ss_pred HHHhhhCC--CCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHH-hCCCeEEEeeccCCCCCCCChh
Q 014936 88 EYLSRDLP--YKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAA-FRHIEVRHFDLLPDKGWEVDLD 164 (415)
Q Consensus 88 ~~~~~~~~--~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~ 164 (415)
+++++.++ ..+++++|++|+|+++++..++.++.++||.|+++.|+|.++...+. ..|.++..+++++++++.+|++
T Consensus 97 ~~~~~~~~~~~~~~~~~v~~~~gg~~a~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~ 176 (435)
T 3piu_A 97 DFMAEIRGNKVTFDPNHLVLTAGATSANETFIFCLADPGEAVLIPTPYYPGFDRDLKWRTGVEIVPIHCTSSNGFQITET 176 (435)
T ss_dssp HHHHHHTTTSSCCCGGGEEEEEHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHTTTTTCCEEEEEECCGGGTSCCCHH
T ss_pred HHHHHhhCCCCCCCHHHEEEcCChHHHHHHHHHHhcCCCCeEEECCCccccHHHHHHHhcCCEEEEeeCCCccCCcCCHH
Confidence 99986544 45778999999999999999999999999999999999999988887 7899999999877667889999
Q ss_pred HHHhhcCC------CceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCC-----
Q 014936 165 DIESLADQ------NTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS----- 233 (415)
Q Consensus 165 ~l~~~~~~------~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~----- 233 (415)
+|++++++ ++++|++++|+||||.+++.+++++|+++|++||+++|+||+|+.+.+++....++..+..
T Consensus 177 ~l~~~l~~~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~d 256 (435)
T 3piu_A 177 ALEEAYQEAEKRNLRVKGVLVTNPSNPLGTTMTRNELYLLLSFVEDKGIHLISDEIYSGTAFSSPSFISVMEVLKDRNCD 256 (435)
T ss_dssp HHHHHHHHHHHTTCCEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCSSSCCCCHHHHHHC----
T ss_pred HHHHHHHHHHhcCCCeEEEEEcCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCcCHHHhccccccc
Confidence 99998865 7889999999999999999999999999999999999999999998888766555544332
Q ss_pred -----CCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhhccccCCchhHHHHHHHHhhCCCc--HHHHH
Q 014936 234 -----TVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQAAVPSILQQPD--EVFFK 306 (415)
Q Consensus 234 -----~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~--~~~~~ 306 (415)
.+++++++|+||.|+++|+|+||+++++ +.+.+.++.... ....+++.+.++..+++... +++++
T Consensus 257 ~~~~~~~~~i~i~s~sK~~g~~G~r~G~~~~~~-------~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~ 328 (435)
T 3piu_A 257 ENSEVWQRVHVVYSLSKDLGLPGFRVGAIYSND-------DMVVAAATKMSS-FGLVSSQTQHLLSAMLSDKKLTKNYIA 328 (435)
T ss_dssp ---CGGGGEEEEEESSSSSCCGGGCEEEEEESC-------HHHHHHHHHHGG-GSCCCHHHHHHHHHHHHCHHHHHHHHH
T ss_pred cccCCCCCEEEEEeeecccCCCceeEEEEEeCC-------HHHHHHHHHHhh-cCCCCHHHHHHHHHHhcChHHHHHHHH
Confidence 4578999999999999999999999854 246666665543 35677888999888887632 34667
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCccccCC-CCCHHHHHHHHHhhcCeEEEcCCCCCC--CCeE
Q 014936 307 KTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLDD-IIDDIDFCFKLAKEESVIILPGTAVGL--KNWL 383 (415)
Q Consensus 307 ~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~~~-~~~~~~~~~~ll~~~gi~v~~g~~~~~--~~~i 383 (415)
+.+++++++++.+.+.|+++ ++. +..+.+|+|+|+.++...... ..+..+++..+++++||.+.||..|+. ++++
T Consensus 329 ~~~~~~~~~~~~l~~~L~~~-g~~-~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~i 406 (435)
T 3piu_A 329 ENHKRLKQRQKKLVSGLQKS-GIS-CLNGNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYEVHLNISPGSSCHCTEPGWF 406 (435)
T ss_dssp HHHHHHHHHHHHHHHHHHTT-TCE-ECCCCSSSEEEEECGGGSSSSSHHHHHHHHHHHHHTSCEECEEGGGGTCSSTTEE
T ss_pred HHHHHHHHHHHHHHHHHHhc-CCc-ccCCCeeEEEEEEcccccccCCchhHHHHHHHHHHHCCEEEeCCcccCCCCCCEE
Confidence 88899999999999999988 787 447788899999987521100 002456777777777999999998864 6899
Q ss_pred EEEeeC-ChhhHHHHHHHHHHHHHHHH
Q 014936 384 RVTFAV-DPYSLEECLDRIKSFYQRHA 409 (415)
Q Consensus 384 Ri~~~~-~~~~l~~~l~~l~~~~~~~~ 409 (415)
||+++. +++++++++++|++++++++
T Consensus 407 Ri~~~~~~~e~i~~~l~~l~~~l~~~~ 433 (435)
T 3piu_A 407 RVCFANLPERTLDLAMQRLKAFVGEYY 433 (435)
T ss_dssp EEECSSSCHHHHHHHHHHHHHHHHHHC
T ss_pred EEEeeCCCHHHHHHHHHHHHHHHHHHh
Confidence 999976 89999999999999987653
No 38
>1v2d_A Glutamine aminotransferase; PLP, riken structural genomics/proteomics initi RSGI, structural genomics; HET: PLP; 1.90A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1v2e_A* 1v2f_A*
Probab=100.00 E-value=1.8e-46 Score=354.16 Aligned_cols=366 Identities=28% Similarity=0.404 Sum_probs=294.3
Q ss_pred CccccCCccCCcchhhHHHHHHHhhhcccccccCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcH
Q 014936 1 MEISNGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLP 80 (415)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~ 80 (415)
|.++++.....++ .+..+.... ..++++||+.|.|+ +++++.+.+++.+.+.. ...|++..+..
T Consensus 1 ~~~~~~~~~~~~~--~~~~~~~~~--------~~~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~--~~~y~~~~~~~ 64 (381)
T 1v2d_A 1 MRLHPRTEAAKES--IFPRMSGLA--------QRLGAVNLGQGFPS----NPPPPFLLEAVRRALGR--QDQYAPPAGLP 64 (381)
T ss_dssp CCCCGGGGGC-----CHHHHHHHH--------HHHTCEECCCCSCS----SCCCHHHHHHHHHHTTT--SCSCCCTTCCH
T ss_pred CchhhhhhhcCcc--HHHHHHHHH--------hcCCeEEecCCCCC----CCCCHHHHHHHHHHHHH--hcCCCCCCCCH
Confidence 6777777777666 343333311 12457999999864 56789999999998875 45788877899
Q ss_pred HHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeecc--CCCC
Q 014936 81 LTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLL--PDKG 158 (415)
Q Consensus 81 ~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~--~~~~ 158 (415)
++|+.+++++ +++++++++|+|+++++..++.++.++||+|+++.|+|+.+...++..|.++..++.+ ++ +
T Consensus 65 ~l~~~la~~~------~~~~~~v~~~~g~~~a~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~-~ 137 (381)
T 1v2d_A 65 ALREALAEEF------AVEPESVVVTSGATEALYVLLQSLVGPGDEVVVLEPFFDVYLPDAFLAGAKARLVRLDLTPE-G 137 (381)
T ss_dssp HHHHHHHHHH------TSCGGGEEEESSHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECEEETT-E
T ss_pred HHHHHHHHhc------CCChhhEEEcCChHHHHHHHHHHhCCCCCEEEEcCCCchhHHHHHHHcCCEEEEEeCCCCCc-c
Confidence 9999999998 5678899999999999999999999999999999999999999999999999999875 32 3
Q ss_pred CCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeE
Q 014936 159 WEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPIL 238 (415)
Q Consensus 159 ~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i 238 (415)
+.+|+++|++.++++++++++++|+||||.++|.+++++|+++|+++|+++|+||+|+++.+ +....++..+ ..++++
T Consensus 138 ~~~d~~~l~~~l~~~~~~v~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~-g~~~~~~~~~-~~~~~~ 215 (381)
T 1v2d_A 138 FRLDLSALEKALTPRTRALLLNTPMNPTGLVFGERELEAIARLARAHDLFLISDEVYDELYY-GERPRRLREF-APERTF 215 (381)
T ss_dssp EECCHHHHHTTCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBS-SSCCCCHHHH-CTTTEE
T ss_pred CCcCHHHHHHhcCcCCEEEEECCCCCCCCCccCHHHHHHHHHHHHHcCCEEEEEcCcccccc-CCCCCCHHHh-cCCCEE
Confidence 67899999999988899999999999999999999999999999999999999999999887 4433344433 345789
Q ss_pred EEccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhhc-cccCCchhHHHHHHHHhhCCCc-HHHHHHHHHHHHHHH
Q 014936 239 TLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYF-DILGDPATFIQAAVPSILQQPD-EVFFKKTLNLLKQSV 316 (415)
Q Consensus 239 ~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~a~~~~l~~~~-~~~~~~~~~~~~~~~ 316 (415)
++.|+||.|+++|+|+||+++++ ++++.+.... ..+++.+++.+.++..+|+... ++++++.++++++++
T Consensus 216 ~~~s~sK~~~~~G~r~G~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~ 287 (381)
T 1v2d_A 216 TVGSAGKRLEATGYRVGWIVGPK--------EFMPRLAGMRQWTSFSAPTPLQAGVAEALKLARREGFYEALREGYRRRR 287 (381)
T ss_dssp EEEEHHHHTTCGGGCCEEEECCT--------TTHHHHHHHHHHHTSSCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHH
T ss_pred EEeechhhcCCcccceEEEEeCH--------HHHHHHHHHHhhcccCCCcHHHHHHHHHHhCcccHHHHHHHHHHHHHHH
Confidence 99999999988999999999865 4566665542 2346678888888888886421 356788899999999
Q ss_pred HHHHHHhhcCCCCcCCCCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCC----CCeEEEEeeCChh
Q 014936 317 DICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGL----KNWLRVTFAVDPY 392 (415)
Q Consensus 317 ~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~----~~~iRi~~~~~~~ 392 (415)
+++.+.|++. ++. +..|.+|+|+|++++. .+ +..++.++||.+.||..|+. .+++||+++.+++
T Consensus 288 ~~l~~~L~~~-g~~-~~~~~~~~~~~~~~~~-------~~---~~~~l~~~gi~v~~g~~~~~~~~~~~~iRi~~~~~~~ 355 (381)
T 1v2d_A 288 DLLAGGLRAM-GLR-VYVPEGTYFLMAELPG-------WD---AFRLVEEARVALIPASAFYLEDPPKDLFRFAFCKTEE 355 (381)
T ss_dssp HHHHHHHHHT-TCC-EECCSBSSEEEEECTT-------CC---HHHHHHHTCEECEEGGGGCSSSCCTTEEEEECCSCHH
T ss_pred HHHHHHHHHC-CCE-ecCCCcceEEEEecCh-------Hh---HHHHHHhCCEEEecchHhCCCCCCCCEEEEEeCCCHH
Confidence 9999999986 777 4467778999998863 11 55667788999999988864 6799999988999
Q ss_pred hHHHHHHHHHHHHHHHHHH
Q 014936 393 SLEECLDRIKSFYQRHAKQ 411 (415)
Q Consensus 393 ~l~~~l~~l~~~~~~~~~~ 411 (415)
++++++++|++++++.++.
T Consensus 356 ~i~~~~~~l~~~l~~~r~~ 374 (381)
T 1v2d_A 356 ELHLALERLGRVVNSPREA 374 (381)
T ss_dssp HHHHHHHHHHHHC------
T ss_pred HHHHHHHHHHHHHhhcccc
Confidence 9999999999998876653
No 39
>1vp4_A Aminotransferase, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE PLP; 1.82A {Thermotoga maritima} SCOP: c.67.1.1
Probab=100.00 E-value=7.3e-47 Score=361.82 Aligned_cols=357 Identities=20% Similarity=0.283 Sum_probs=296.9
Q ss_pred CcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcC--CCCCCCCCCCcHHHHHHHHHHHhhhCCCC-CCCCcEEEeCChH
Q 014936 34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSE--KFNGYAPTAGLPLTRRAIAEYLSRDLPYK-LTPNDVFVTSGCT 110 (415)
Q Consensus 34 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~--~~~~y~~~~g~~~lr~~ia~~~~~~~~~~-~~~~~i~i~~g~~ 110 (415)
+++++||+.|.|+.. ..+++.+.+++.+.+... ....|++..|..++|+++++++.+.+|.. +++++|++|+|++
T Consensus 42 ~~~~idl~~g~~~~~--~~~~~~v~~a~~~~~~~~~~~~~~y~~~~g~~~lr~~la~~l~~~~g~~~~~~~~v~~t~G~~ 119 (425)
T 1vp4_A 42 DKDAISFGGGVPDPE--TFPRKELAEIAKEIIEKEYHYTLQYSTTEGDPVLKQQILKLLERMYGITGLDEDNLIFTVGSQ 119 (425)
T ss_dssp STTCEECCCCSCCGG--GSCHHHHHHHHHHHHHHSHHHHTSCCCTTCCHHHHHHHHHHHHHHHCCCSCCGGGEEEEEHHH
T ss_pred CCCceeCCCCCCCcc--cCCHHHHHHHHHHHHhhcchhhcCCCCCCCCHHHHHHHHHHHHhccCCCCCCcccEEEeccHH
Confidence 567899999987532 346788999999888653 13578887899999999999997765766 7889999999999
Q ss_pred HHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCC--------CceEE-EecC
Q 014936 111 QAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ--------NTVAL-VIIN 181 (415)
Q Consensus 111 ~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~--------~~~~v-~i~~ 181 (415)
+++.+++.++.++||+|+++.|+|+++...++..|.++..++.+++ ++|+++|++.+++ ++++| ++++
T Consensus 120 ~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~---~~d~~~l~~~l~~~~~~~~~~~~~~v~~~~~ 196 (425)
T 1vp4_A 120 QALDLIGKLFLDDESYCVLDDPAYLGAINAFRQYLANFVVVPLEDD---GMDLNVLERKLSEFDKNGKIKQVKFIYVVSN 196 (425)
T ss_dssp HHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHTTTCEEEEEEEETT---EECHHHHHHHHHHHHHTTCGGGEEEEEEECS
T ss_pred HHHHHHHHHhCCCCCEEEEeCCCcHHHHHHHHHcCCEEEEeccCCC---CCCHHHHHHHHHhhhhcccCCCceEEEECCC
Confidence 9999999999999999999999999999999999999999988542 3899999988865 67887 5789
Q ss_pred CCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeC
Q 014936 182 PGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTD 261 (415)
Q Consensus 182 p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~ 261 (415)
|+||||.++|.+++++|+++|+++|+++|+||+|+.+.+++....++..++..++++++.|+||.|+ +|+|+||+++++
T Consensus 197 ~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~~-~G~r~G~~~~~~ 275 (425)
T 1vp4_A 197 FHNPAGVTTSLEKRKALVEIAEKYDLFIVEDDPYGALRYEGETVDPIFKIGGPERVVLLNTFSKVLA-PGLRIGMVAGSK 275 (425)
T ss_dssp SCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECSSTTCBCSSCCCCCHHHHHCTTTEEEEEESTTTTC-GGGCEEEEECCH
T ss_pred CCCCCCCcCCHHHHHHHHHHHHHcCCEEEEECCCccccCCCCCCcCHHHhCCCCCEEEEeccccccc-cccceEEEeeCH
Confidence 9999999999999999999999999999999999999887665555655555567899999999998 999999999864
Q ss_pred CCCCCChHHHHHHHHhhc-cccCCchhHHHHHHHHhhCCCc-HHHHHHHHHHHHHHHHHHHHHhhc-CC---CCcCCCCC
Q 014936 262 PCGMFRKPKVVERMKKYF-DILGDPATFIQAAVPSILQQPD-EVFFKKTLNLLKQSVDICYNKIKE-IP---CISCPHKP 335 (415)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~a~~~~l~~~~-~~~~~~~~~~~~~~~~~l~~~l~~-~~---~~~~~~~p 335 (415)
++++.+.... ..+.+++++.|.++.++|+... ++++++.+++++++++.+.+.|++ +| ++. +..|
T Consensus 276 --------~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~g~~-~~~~ 346 (425)
T 1vp4_A 276 --------EFIRKIVQAKQSADLCSPAITHRLAARYLERYDLLEQLKPTIELYRRKRTVMLNALEEYFSDIPGVK-WVKS 346 (425)
T ss_dssp --------HHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHSCHHHHTHHHHHHHHHHHHHHHHHHHHHSTTSTTCE-ECCC
T ss_pred --------HHHHHHHHHhhhhcCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCceE-EecC
Confidence 6777776653 2345678899999999987642 467888899999999999999987 45 576 4468
Q ss_pred CCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCC----CCeEEEEeeC-ChhhHHHHHHHHHHHHHHHHH
Q 014936 336 EGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGL----KNWLRVTFAV-DPYSLEECLDRIKSFYQRHAK 410 (415)
Q Consensus 336 ~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~----~~~iRi~~~~-~~~~l~~~l~~l~~~~~~~~~ 410 (415)
.+|+|+|++++.. .+..++...++++ ||.+.||..|+. .+++||+++. +++++++++++|+++++++.+
T Consensus 347 ~~g~~~~~~~~~~-----~~~~~l~~~l~~~-gi~v~~g~~f~~~~~~~~~iRis~~~~~~e~i~~~l~~l~~~l~~~~~ 420 (425)
T 1vp4_A 347 EGGLFIWLTLPEG-----FDTWEMFEYAKRK-KVFYVPGRVFKVYDEPSPSMRLSFCLPPDEKIVEGIKRLREVVLEYGK 420 (425)
T ss_dssp SBSSEEEEECCTT-----CCTTTTHHHHHHH-TEECEEGGGGCTTCCCCSEEEEECSSSCHHHHHHHHHHHHHHHHHHHH
T ss_pred CccEEEEEEcCCC-----CCHHHHHHHHHHC-CCEEECchhhcCCCCCCCeEEEEeCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 8899999998641 1345667777655 999999988853 5799999975 789999999999999988766
Q ss_pred H
Q 014936 411 Q 411 (415)
Q Consensus 411 ~ 411 (415)
+
T Consensus 421 ~ 421 (425)
T 1vp4_A 421 E 421 (425)
T ss_dssp H
T ss_pred h
Confidence 5
No 40
>4f4e_A Aromatic-amino-acid aminotransferase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: LLP; 1.80A {Burkholderia pseudomallei} PDB: 4eff_A*
Probab=100.00 E-value=1.4e-46 Score=359.34 Aligned_cols=372 Identities=15% Similarity=0.166 Sum_probs=296.7
Q ss_pred CccccCCccCCcchhhHHHHHHHhhhcccccccCcceeEeccc---CCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCC
Q 014936 1 MEISNGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMG---DPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTA 77 (415)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g---~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~ 77 (415)
|.++++....+++ ++..+.....++. .+++|||+.| +|+. ..++++.+++++.+.+.......|++..
T Consensus 22 ~~~~~~~~~~~~~--~i~~~~~~~~~~~-----~~~~i~l~~G~y~d~~~--~~~~~~~v~~a~~~~~~~~~~~~Y~~~~ 92 (420)
T 4f4e_A 22 MSLFSAVELAPRD--PILGLNEAFNADT-----RPTKVNLGVGVYTNEDG--KIPLLRAVRDAEKARVEAGLPRGYLPID 92 (420)
T ss_dssp CCTTTTCCCCCCC--HHHHHHHHHHHCC-----CSSCEECCCCSCCCTTS--CCCCCHHHHHHHHHHHHTCCCCCCCCTT
T ss_pred cCHhhcCCcCCCC--hHHHHHHHHHhcC-----CCCcEEeeeeeeECCCC--CccCcHHHHHHHHHHhccCCCCCCCCCC
Confidence 6788888888888 7777776555443 4578999999 5542 2456699999999988875556899989
Q ss_pred CcHHHHHHHHHHHhhhCCCCCCCC--cEEEeCChHHHHHHHH--HHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeec
Q 014936 78 GLPLTRRAIAEYLSRDLPYKLTPN--DVFVTSGCTQAIDVAM--ALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDL 153 (415)
Q Consensus 78 g~~~lr~~ia~~~~~~~~~~~~~~--~i~i~~g~~~al~~~~--~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~ 153 (415)
|.+++|+++++++....+..++++ +|++|+|+++++..++ .+++++||+|++++|+|.++...++..|.+++.++.
T Consensus 93 g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~t~al~~~~~~~~~~~~gd~Vlv~~p~~~~~~~~~~~~g~~~~~v~~ 172 (420)
T 4f4e_A 93 GIAAYDASVQKLLLGDDSPLIAAGRVVTAQALGGTGALKIGADFLRTLNPKAKVAISDPSWENHRALFDMAGFEVVAYPY 172 (420)
T ss_dssp CCHHHHHHHHHHHHCTTCHHHHTTCEEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEESCCHHHHHHHHHTTCCEEEEEC
T ss_pred CcHHHHHHHHHHhcCCCccccccCceEEEECCccHHHHHHHHHHHHHhCCCCEEEEeCCCcHhHHHHHHHcCCeEEEeee
Confidence 999999999999975444334678 8999999999999994 456799999999999999999999999999999998
Q ss_pred cCCCCCCCChhHHHhhcC---CCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCC-Cccccc
Q 014936 154 LPDKGWEVDLDDIESLAD---QNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDK-PFVPMG 229 (415)
Q Consensus 154 ~~~~~~~~~~~~l~~~~~---~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~-~~~~~~ 229 (415)
..++++.+|++.+++.++ ++++++++++|+||||.+++.+++++|+++|+++|+++|+||+|.++.+++. ...++.
T Consensus 173 ~~~~~~~~d~~~l~~~l~~~~~~~~~v~i~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~ 252 (420)
T 4f4e_A 173 YDAKTNGVNFDGMLAALNGYEPGTIVVLHACCHNPTGVDLNDAQWAQVVEVVKARRLVPFLDIAYQGFGESIEADAAAVR 252 (420)
T ss_dssp EETTTTEECHHHHHHHHTTCCTTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTSSSCTTGGGHHHH
T ss_pred eccccCccCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEccccccccCCcchhhHHHH
Confidence 444567899999999987 5778899999999999999999999999999999999999999999998742 233333
Q ss_pred cc-CCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHHH----HHhhc-cccCCchhHHHHHHHHhhCCCc--
Q 014936 230 VF-GSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVER----MKKYF-DILGDPATFIQAAVPSILQQPD-- 301 (415)
Q Consensus 230 ~~-~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~----~~~~~-~~~~~~~~~~~~a~~~~l~~~~-- 301 (415)
.+ +..+++++++||||.|+++|+|+||+++... ++++++. ++... ..+.+++...|.++..++....
T Consensus 253 ~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~ 327 (420)
T 4f4e_A 253 LFAAANLNVFVSSSFSKSFSLYGERVGALSIITD-----SKDEAARVLSQLKRVIRTNYSNPPTHGGAIVAAVLASPELR 327 (420)
T ss_dssp HHHHTTCCEEEEEECTTTTTCGGGCEEEEEEECS-----SHHHHHHHHHHHHHHHHTTTSSCCSHHHHHHHHHHHCHHHH
T ss_pred HHHhcCCCEEEEEeCCccCcCcCCCcEEEEEEcC-----CHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHhcCHHHH
Confidence 33 3456789999999999999999999975321 1234433 32221 2335567888888888887632
Q ss_pred ---HHHHHHHHHHHHHHHHHHHHHhhcC---CCCcCCCCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCC
Q 014936 302 ---EVFFKKTLNLLKQSVDICYNKIKEI---PCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGT 375 (415)
Q Consensus 302 ---~~~~~~~~~~~~~~~~~l~~~l~~~---~~~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~ 375 (415)
++++++.+++++++++.+.+.|+++ +++. +..|.+|+|+|+.++ . +.+..++.++||.+.|+.
T Consensus 328 ~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~-~~~~~~g~~~~~~~~---------~-~~~~~~l~~~gI~v~~~~ 396 (420)
T 4f4e_A 328 ASWVQELGEMRDRIRAMRNGLVERLKAAGIERDFS-FINAQRGMFSYSGLT---------S-AQVDRLREEFGIYAVSTG 396 (420)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSCCT-HHHHSCSSEEECCCC---------H-HHHHHHHHHHCEECCTTS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCce-eECCCccEEEEeCCC---------H-HHHHHHHHhCCEEecCCC
Confidence 3567888999999999999999986 3666 447889999997663 2 345667788899998852
Q ss_pred CCCCCCeEEEEeeC-ChhhHHHHHHHHHHHH
Q 014936 376 AVGLKNWLRVTFAV-DPYSLEECLDRIKSFY 405 (415)
Q Consensus 376 ~~~~~~~iRi~~~~-~~~~l~~~l~~l~~~~ 405 (415)
|++++. +++++++++++|++++
T Consensus 397 --------Ris~~~~~~~~i~~~~~~l~~~l 419 (420)
T 4f4e_A 397 --------RICVAALNTRNLDVVANAIAAVL 419 (420)
T ss_dssp --------EEEGGGCCTTTHHHHHHHHHHHH
T ss_pred --------eEEEecCCHHHHHHHHHHHHHHh
Confidence 999964 8888999999998875
No 41
>3l8a_A METC, putative aminotransferase, probable beta-cystathi; beta-cystathionase, lyase; HET: PLP; 1.54A {Streptococcus mutans}
Probab=100.00 E-value=1.8e-46 Score=358.58 Aligned_cols=353 Identities=18% Similarity=0.284 Sum_probs=302.8
Q ss_pred CcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHH
Q 014936 34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAI 113 (415)
Q Consensus 34 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al 113 (415)
++++++|+.|++. ++++|.+.+++.+.+.... ..|++. ..++++++++++.+.+++.+++++|++++|+++++
T Consensus 60 g~~~i~~~~~~~~----~~~~~~v~~a~~~~~~~~~-~~y~~~--~~~l~~~l~~~l~~~~g~~~~~~~v~~~~g~~ea~ 132 (421)
T 3l8a_A 60 NPELLQMWVADMD----FLPVPEIKEAIINYGREHI-FGYNYF--NDDLYQAVIDWERKEHDYAVVKEDILFIDGVVPAI 132 (421)
T ss_dssp CTTCEECCSSCCC----SCCCHHHHHHHHHHHHHCC-SSCBCC--CHHHHHHHHHHHHHHHCCCCCGGGEEEESCHHHHH
T ss_pred CCCeeecccCCCC----CCCCHHHHHHHHHHHhcCC-cCCCCC--CHHHHHHHHHHHHHHhCCCCCHHHEEEcCCHHHHH
Confidence 6789999999854 7789999999999887533 467654 38999999999998888888899999999999999
Q ss_pred HHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeecc-CCCCCCCChhHHHhhcC-CCceEEEecCCCCccccCCC
Q 014936 114 DVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLL-PDKGWEVDLDDIESLAD-QNTVALVIINPGNPCGNVYS 191 (415)
Q Consensus 114 ~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~-~~~~~~~~~~~l~~~~~-~~~~~v~i~~p~nptG~~~~ 191 (415)
+.+++++.++||+|+++.|+|+++...+...|.++..++.+ .+.++.+|+++|+++++ ++++++++++|+||||.+++
T Consensus 133 ~~a~~~~~~~gd~Vi~~~~~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~vil~~p~nptG~~~~ 212 (421)
T 3l8a_A 133 SIALQAFSEKGDAVLINSPVYYPFARTIRLNDHRLVENSLQIINGRFEIDFEQLEKDIIDNNVKIYLLCSPHNPGGRVWD 212 (421)
T ss_dssp HHHHHHHSCTEEEEEEEESCCHHHHHHHHHTTEEEEEEECEEETTEEECCHHHHHHHHHHTTEEEEEEESSBTTTTBCCC
T ss_pred HHHHHHhcCCCCEEEECCCCcHHHHHHHHHCCCEEEeccccccCCCeeeCHHHHHHHhhccCCeEEEECCCCCCCCCcCC
Confidence 99999999999999999999999999999999999999876 44556789999999997 68999999999999999999
Q ss_pred HHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCC--CCCeEEEccCccccCCCCceEEEEEeeCCCCCCChH
Q 014936 192 YQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS--TVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKP 269 (415)
Q Consensus 192 ~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~--~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~ 269 (415)
.+++++|+++|+++|+++|+||+|.++.+++....++..+.. .++++++.|+||.|+++|+|+||+++++ +
T Consensus 213 ~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~~~G~~~~~~-------~ 285 (421)
T 3l8a_A 213 NDDLIKIAELCKKHGVILVSDEIHQDLALFGNTHHSLNTLDASYKDFTIILSSATKTFNIAGTKNSFAIIQN-------E 285 (421)
T ss_dssp HHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSCTTGGGTEEEEECSHHHHTCGGGCCEEEECCS-------H
T ss_pred HHHHHHHHHHHHHcCCEEEEEccccccccCCCCCccHHHcCchhcCcEEEEEeChhhccCchhheEeEEcCC-------H
Confidence 999999999999999999999999999988876667666644 3678999999999999999999999874 2
Q ss_pred HHHHHHHhhc-c-ccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCc
Q 014936 270 KVVERMKKYF-D-ILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNL 347 (415)
Q Consensus 270 ~~~~~~~~~~-~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~ 347 (415)
++.+.+.... . ...+++++++.++.++++. .++++++..++++++++++.+.|+++|++. +..|.++++.|++++.
T Consensus 286 ~l~~~~~~~~~~~~~~~~n~~~~~a~~aal~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~~i~-~~~~~~~~~~~v~~~~ 363 (421)
T 3l8a_A 286 SLRRKFQYRQLANNQHEVPTVGMIATQAAFQY-GKPWLEELKTVIEGNIKLVIKELEAKTKIK-VMEPEGTYLVWLDFSA 363 (421)
T ss_dssp HHHHHHHHHHHHTTCSCCCHHHHHHHHHHHHH-CHHHHHHHHHHHHHHHHHHHHHHHHHCSCE-EECCSBSSEEEEECGG
T ss_pred HHHHHHHHHHHhcccCCCCHHHHHHHHHHHhc-cHHHHHHHHHHHHHHHHHHHHHHHhCCCce-EeCCCeeEEEEEeccc
Confidence 5777776653 2 2347888999999888874 357889999999999999999998877888 4478889999998864
Q ss_pred cccCCCCCHHHHHHHHHhhcCeEEEcCCCCCC--CCeEEEEeeCChhhHHHHHHHHHHHHH
Q 014936 348 SLLDDIIDDIDFCFKLAKEESVIILPGTAVGL--KNWLRVTFAVDPYSLEECLDRIKSFYQ 406 (415)
Q Consensus 348 ~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~--~~~iRi~~~~~~~~l~~~l~~l~~~~~ 406 (415)
.. .+..++...+++++||.+.||..|+. .+++||+++++++++++++++|+++++
T Consensus 364 ~~----~~~~~l~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~~~~~~~i~~~l~~l~~~l~ 420 (421)
T 3l8a_A 364 YA----IAQPQLSEKLQNEAKVVLNDGAHFGKEGKYFARLNVATPKNTVQEALSRIISVFG 420 (421)
T ss_dssp GT----CCTTHHHHHHHHTTCEECEEGGGGCGGGTTEEEEECCSCHHHHHHHHHHHHHHC-
T ss_pred cC----CCHHHHHHHHHHhCCEEEECchhhCCCCCCEEEEEecCCHHHHHHHHHHHHHHHh
Confidence 21 14567778777778999999998875 689999999999999999999998764
No 42
>3ei9_A LL-diaminopimelate aminotransferase; lysine biosynthesis, pyridoxal 5' phosphat external aldimine, chloroplast, pyridox phosphate; HET: PL6; 1.55A {Arabidopsis thaliana} PDB: 3ei8_A* 3eib_A* 3ei6_A* 2z1z_A* 3ei5_A* 2z20_A* 3ei7_A 3eia_A*
Probab=100.00 E-value=3.8e-46 Score=357.70 Aligned_cols=353 Identities=21% Similarity=0.304 Sum_probs=283.3
Q ss_pred cCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhc----CCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCC
Q 014936 33 NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLS----EKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSG 108 (415)
Q Consensus 33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~----~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g 108 (415)
.++++|+|+.|+++ +++++.+++++.+.+.. .....|++..|..+||+++++|+.+ ++++++++|++|+|
T Consensus 54 ~~~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~~~~~~~~~~y~~~~g~~~l~~~ia~~~~~--~~~~~~~~i~~t~G 127 (432)
T 3ei9_A 54 PDAQVISLGIGDTT----EPIPEVITSAMAKKAHELSTIEGYSGYGAEQGAKPLRAAIAKTFYG--GLGIGDDDVFVSDG 127 (432)
T ss_dssp TTCCCEECSSCCCC----SCCCHHHHHHHHHHHHHTTSTTTCCCCCCTTCCHHHHHHHHHHHHT--TTTCCGGGEEEESC
T ss_pred CCCCeEEccCCCCC----CCCCHHHHHHHHHHHhcccccCCccCCCCCCCCHHHHHHHHHHHHc--cCCCCcceEEECCC
Confidence 35689999999865 67889999999998763 2335788888999999999999974 55678899999999
Q ss_pred hHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCC------------eEEEeeccCCCCCCCChhHHHhhcCCCceE
Q 014936 109 CTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHI------------EVRHFDLLPDKGWEVDLDDIESLADQNTVA 176 (415)
Q Consensus 109 ~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~------------~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 176 (415)
+++++.++ ..++++||.|+++.|+|+++...++..|. ++..++++.++++..+++. .+++++
T Consensus 128 ~~~al~~l-~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-----~~~~~~ 201 (432)
T 3ei9_A 128 AKCDISRL-QVMFGSNVTIAVQDPSYPAYVDSSVIMGQTGQFNTDVQKYGNIEYMRCTPENGFFPDLST-----VGRTDI 201 (432)
T ss_dssp HHHHHHHH-HHHHCTTCCEEEEESCCTHHHHHHHHHTCSCCEETTTTEETTCEEEECCGGGTTSCCGGG-----CCCCSE
T ss_pred hHHHHHHH-HHHcCCCCEEEEeCCCCHHHHHHHHHcCCcccccccccccCceEEeccCcccCCcCChhh-----CCCCCE
Confidence 99999975 67778999999999999999998887774 6777887655454455443 357889
Q ss_pred EEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccC-CCCCeEEEccCccccCCCCceEE
Q 014936 177 LVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFG-STVPILTLGSLSKRWIVPGWRLG 255 (415)
Q Consensus 177 v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~-~~~~~i~~~s~sK~~~~~G~r~G 255 (415)
+++++|+||||.+++.+++++|+++|+++|+++|+||+|+++.+++... ++..+. ..++++++.|+||.|+++|+|+|
T Consensus 202 v~l~~p~NPtG~~~~~~~l~~l~~la~~~~~~li~Dea~~~~~~~~~~~-~~~~~~~~~~~~i~~~S~SK~~g~~G~r~G 280 (432)
T 3ei9_A 202 IFFCSPNNPTGAAATREQLTQLVEFAKKNGSIIVYDSAYAMYMSDDNPR-SIFEIPGAEEVAMETASFSNYAGFTGVRLG 280 (432)
T ss_dssp EEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCSSCCS-SGGGSTTGGGTEEEEEESHHHHCTTTTCCE
T ss_pred EEEeCCCCCCCCCCCHHHHHHHHHHHHHcCcEEEEccchHhhccCCCCC-ChhhcCCCCCeEEEEecchhccCCcccceE
Confidence 9999999999999999999999999999999999999999988765432 333332 24578999999999999999999
Q ss_pred EEEeeCCCCCCChHHHHHHHHhhc-cccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCC
Q 014936 256 WFVTTDPCGMFRKPKVVERMKKYF-DILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHK 334 (415)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~ 334 (415)
|++++++........+.+.+.... ....++++++|.++.+++.....+++++.+++++++++++.+.|+++ ++. +..
T Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~ 358 (432)
T 3ei9_A 281 WTVIPKKLLYSDGFPVAKDFNRIICTCFNGASNISQAGALACLTPEGLEAMHKVIGFYKENTNIIIDTFTSL-GYD-VYG 358 (432)
T ss_dssp EEECCTTCBCTTSCBHHHHHHHHHHHSCCCSCHHHHHHHHHHSSHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TCC-EEE
T ss_pred EEEEChHHhhcchHHHHHHHHHHhccccCCCCHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHC-Cce-ecC
Confidence 999976320000001255555442 23456788999998888864334678899999999999999999988 777 436
Q ss_pred CCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCC--CCeEEEEeeCChhhHHHHHHHHHHHHH
Q 014936 335 PEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGL--KNWLRVTFAVDPYSLEECLDRIKSFYQ 406 (415)
Q Consensus 335 p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~--~~~iRi~~~~~~~~l~~~l~~l~~~~~ 406 (415)
|.+++|+|+.++. .+..+++..+++++||.+.||..|+. ++++||+++.+++++++++++|++..+
T Consensus 359 ~~~~~~~~~~~~~------~~~~~~~~~ll~~~gv~v~~g~~f~~~~~~~iRis~~~~~e~l~~~l~rl~~~~~ 426 (432)
T 3ei9_A 359 GKNAPYVWVHFPN------QSSWDVFAEILEKTHVVTTPGSGFGPGGEGFVRVSAFGHRENILEACRRFKQLYK 426 (432)
T ss_dssp CSSSSEEEEECTT------SCHHHHHHHHHHHHCEECEEGGGGCGGGTTEEEEECCSCHHHHHHHHHHHHHHHT
T ss_pred CCcceEEEEECCC------CCHHHHHHHHHHHCCEEEeCchHhCCCCCCEEEEEecCCHHHHHHHHHHHHHHhh
Confidence 6789999999872 25778888888888999999998875 689999998899999999999987643
No 43
>1iay_A ACC synthase 2, 1-aminocyclopropane-1-carboxylate synthase 2; protein-cofactor-inhibitor complex, V6-dependent enzyme, LYA; HET: PLP AVG; 2.70A {Solanum lycopersicum} SCOP: c.67.1.4 PDB: 1iax_A*
Probab=100.00 E-value=1.2e-45 Score=353.88 Aligned_cols=390 Identities=19% Similarity=0.310 Sum_probs=299.9
Q ss_pred cccCCccCCcc-hhhHHHHHHHhh-hcccccccCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhc----------CCC
Q 014936 3 ISNGGIDNTGS-IITIKGMLSLLM-QSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLS----------EKF 70 (415)
Q Consensus 3 ~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~----------~~~ 70 (415)
+|+|+...... ..++-+.+..+. +.++...++..+++|+.+.+. + .++.+.+++.+.... ...
T Consensus 2 ~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~----~-~~~~v~~~~~~~~~~~~~~~~~~~~~~~ 76 (428)
T 1iay_A 2 LSKLATNEEHGENSPYFDGWKAYDSDPFHPLKNPNGVIQMGLAENQ----L-CLDLIEDWIKRNPKGSICSEGIKSFKAI 76 (428)
T ss_dssp CCTTGGGC-----CCTTHHHHHHHHSBCCSSSSTTSBEECSSCCCC----S-SHHHHHHHHHHCTTSSTTC----CHHHH
T ss_pred cccccccccCcccccccchhhhhccCCCCcccCCCceeeeccccch----h-hHHHHHHHHHhccccccccccccccHhh
Confidence 57787665533 223333333232 345544445678999987632 2 346788888753210 123
Q ss_pred CCCCCCCCcHHHHHHHHHHHhhhCCCC--CCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHH-HhCCCe
Q 014936 71 NGYAPTAGLPLTRRAIAEYLSRDLPYK--LTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSA-AFRHIE 147 (415)
Q Consensus 71 ~~y~~~~g~~~lr~~ia~~~~~~~~~~--~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~-~~~g~~ 147 (415)
..|+++.|..++|+++|+++++.+|.. +++++|++++|+++++.+++++++++||+|+++.|+|+.+...+ ...|++
T Consensus 77 ~~Y~~~~g~~~lr~~la~~~~~~~g~~~~~~~~~i~~~~G~~~ai~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~~g~~ 156 (428)
T 1iay_A 77 ANFQDYHGLPEFRKAIAKFMEKTRGGRVRFDPERVVMAGGATGANETIIFCLADPGDAFLVPSPYYPAFNRDLRWRTGVQ 156 (428)
T ss_dssp HHCCCTTCCHHHHHHHHHHHHHHTTTCSCCCTTSCEEEEHHHHHHHHHHHHHCCTTCEEEEESSCCTTHHHHTTTTTCCE
T ss_pred cCCCCCCCcHHHHHHHHHHHHHhcCCCCCCChhhEEEccChHHHHHHHHHHhCCCCCeEEEccCCCcchHHHHHHhcCCE
Confidence 578888889999999999999877755 77899999999999999999999999999999999999987755 468999
Q ss_pred EEEeeccCCCCCCCChhHHHhhcCC------CceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccC
Q 014936 148 VRHFDLLPDKGWEVDLDDIESLADQ------NTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFG 221 (415)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~l~~~~~~------~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~ 221 (415)
++.++.+.++++.+|++.+++++++ +++++++++|+||||.+++.+++++|+++|+++|+++|+||+|..+.++
T Consensus 157 ~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~ 236 (428)
T 1iay_A 157 LIPIHCESSNNFKITSKAVKEAYENAQKSNIKVKGLILTNPSNPLGTTLDKDTLKSVLSFTNQHNIHLVCDEIYAATVFD 236 (428)
T ss_dssp EEEECCCTTTTTCCCHHHHHHHHHHHHHTTCCEEEEEEESSCTTTCCCCCHHHHHHHHHHHHTTTCEEEEECTTGGGCCS
T ss_pred EEEeecCCccCCcCCHHHHHHHHHHHHhcCCceEEEEEcCCCCCCCCcCCHHHHHHHHHHHHHCCeEEEEeccccccccC
Confidence 9999886555678899999988753 6888999999999999999999999999999999999999999998876
Q ss_pred CCCcccccccCC--------CCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhhccccCCchhHHHHHH
Q 014936 222 DKPFVPMGVFGS--------TVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQAAV 293 (415)
Q Consensus 222 ~~~~~~~~~~~~--------~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 293 (415)
+....++..+.. .++++++.|+||.|+++|+|+||+++++ +++++.++.... .++.++++|.++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~d~viv~~s~sK~~g~~Glr~G~~~~~~-------~~~~~~~~~~~~-~~~~~~~~~~a~ 308 (428)
T 1iay_A 237 TPQFVSIAEILDEQEMTYCNKDLVHIVYSLSKDMGLPGFRVGIIYSFN-------DDVVNCARKMSS-FGLVSTQTQYFL 308 (428)
T ss_dssp SSCCCCHHHHHTSGGGTTSCTTSEEEEEESTTTSSCGGGCEEEEEESC-------HHHHHHHHHHHT-TSCCCHHHHHHH
T ss_pred CCCccCHHHhccccccccCCCCcEEEEecchhhcCCCCceEEEEEeCC-------HHHHHHHHHHHh-cccCCHHHHHHH
Confidence 654444444432 3678999999999999999999999854 257777765533 356788999999
Q ss_pred HHhhCCCc--HHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCccccCC-CCCHHHHHHHHHhhcCeE
Q 014936 294 PSILQQPD--EVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLDD-IIDDIDFCFKLAKEESVI 370 (415)
Q Consensus 294 ~~~l~~~~--~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~~~-~~~~~~~~~~ll~~~gi~ 370 (415)
..+|+... ++++++.+++++++++.+.+.|+++ ++. +..+.+|+|+|++++...... ..+..++...+++++||.
T Consensus 309 ~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~ 386 (428)
T 1iay_A 309 AAMLSDEKFVDNFLRESAMRLGKRHKHFTNGLEVV-GIK-CLKNNAGLFCWMDLRPLLRESTFDSEMSLWRVIINDVKLN 386 (428)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TCC-BCCCSSSSEEEEECGGGCSSSSHHHHHHHHHHHHHTSCEE
T ss_pred HHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCc-ccCCCeeEEEEEechhhcCCCchhHHHHHHHHHHHhCCEE
Confidence 99997632 2467888899999999999999988 777 435668999999986421000 002346667766666999
Q ss_pred EEcCCCCCC--CCeEEEEee-CChhhHHHHHHHHHHHHHH
Q 014936 371 ILPGTAVGL--KNWLRVTFA-VDPYSLEECLDRIKSFYQR 407 (415)
Q Consensus 371 v~~g~~~~~--~~~iRi~~~-~~~~~l~~~l~~l~~~~~~ 407 (415)
+.||..|+. ++++||+++ .+++++++++++|++++++
T Consensus 387 v~~~~~~~~~~~~~iRis~~~~~~e~i~~~~~~l~~~l~~ 426 (428)
T 1iay_A 387 VSPGSSFECQEPGWFRVCFANMDDGTVDIALARIRRFVGV 426 (428)
T ss_dssp CEEGGGGTCSSSSEEEEECSSSCHHHHHHHHHHHHHHHHT
T ss_pred EeCchhhCCCCCCEEEEEEecCCHHHHHHHHHHHHHHHhc
Confidence 999988765 579999997 8899999999999988753
No 44
>3ffh_A Histidinol-phosphate aminotransferase; APC88260, listeria in CLIP11262, structural genomics, PSI-2; 2.31A {Listeria innocua} SCOP: c.67.1.0
Probab=100.00 E-value=3.8e-45 Score=342.78 Aligned_cols=333 Identities=18% Similarity=0.264 Sum_probs=284.4
Q ss_pred cCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHH
Q 014936 33 NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQA 112 (415)
Q Consensus 33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~a 112 (415)
+.+++++|+.|.+. +++++.+++++.+.+. ....|++ .+..++|+++++++ ++++++|++|+|++++
T Consensus 30 ~~~~~i~l~~~~~~----~~~~~~v~~a~~~~~~--~~~~y~~-~~~~~lr~~la~~~------~~~~~~v~~~~g~t~a 96 (363)
T 3ffh_A 30 GLTKITKLSSNENP----LGTSKKVAAIQANSSV--ETEIYPD-GWASSLRKEVADFY------QLEEEELIFTAGVDEL 96 (363)
T ss_dssp TCSCCEECSSCSCT----TCCCHHHHHHHHTCBS--CCCBC-----CHHHHHHHHHHH------TCCGGGEEEESSHHHH
T ss_pred CCCceEEccCCCCC----CCCCHHHHHHHHHHHH--HhhcCCC-cchHHHHHHHHHHh------CCChhhEEEeCCHHHH
Confidence 35689999999864 6788999999988664 3456765 58899999999999 4678999999999999
Q ss_pred HHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCH
Q 014936 113 IDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSY 192 (415)
Q Consensus 113 l~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~ 192 (415)
+..++.++.++||+|+++.|+|+.+...++..|.++..++.++ ++.+|+++++++++++++++++++|+||||.++|.
T Consensus 97 ~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~~ 174 (363)
T 3ffh_A 97 IELLTRVLLDTTTNTVMATPTFVQYRQNALIEGAEVREIPLLQ--DGEHDLEGMLNAIDEKTTIVWICNPNNPTGNYIEL 174 (363)
T ss_dssp HHHHHHHHCSTTCEEEEEESSCHHHHHHHHHHTCEEEEEECCT--TSCCCHHHHHHHCCTTEEEEEEESSCTTTCCCCCH
T ss_pred HHHHHHHHccCCCEEEEcCCChHHHHHHHHHcCCEEEEecCCC--CCCcCHHHHHHhcccCCCEEEEeCCCCCcCCCcCH
Confidence 9999999999999999999999999999999999999999864 56799999999999899999999999999999999
Q ss_pred HHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHH
Q 014936 193 QHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVV 272 (415)
Q Consensus 193 ~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~ 272 (415)
+++.+|++.|++ |+++|+||+|+++.+ +............++++++.|+||.++++|+|+||+++++ +++
T Consensus 175 ~~l~~l~~~~~~-~~~li~De~~~~~~~-~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~--------~~~ 244 (363)
T 3ffh_A 175 ADIQAFLDRVPS-DVLVVLDEAYIEYVT-PQPEKHEKLVRTYKNLIITRTFSKIYGLASARVGYGIADK--------EII 244 (363)
T ss_dssp HHHHHHHTTSCT-TSEEEEECTTGGGCS-SCCCCCGGGGGTCTTEEEEEESSSTTCCSSCCCEEEEECH--------HHH
T ss_pred HHHHHHHHhCCC-CcEEEEeCchHhhcC-ccccCHHHHhhcCCCEEEEeechhhhcCchhceeeeecCH--------HHH
Confidence 999999999988 999999999998887 4434444444556789999999999999999999999954 688
Q ss_pred HHHHhhccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCccccCC
Q 014936 273 ERMKKYFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLDD 352 (415)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~~~ 352 (415)
+.++.... .++.+++.+.++..+|+. .+++++.+++++++++.+.+.|++++++. + .|..|+|+|++++.
T Consensus 245 ~~l~~~~~-~~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~l~~~l~~~~g~~-~-~~~~~~~~~~~~~~----- 314 (363)
T 3ffh_A 245 RQLNIVRP-PFNTTSIGQKLAIEAIKD--QAFIGECRTSNANGIKQYEAFAKRFEKVK-L-YPANGNFVLIDLGI----- 314 (363)
T ss_dssp HHHHHTCC-SCCCBHHHHHHHHHHHHC--HHHHHHHHHHHHHHHHHHHHHHHHCTTCE-E-CCCCSSEEEEECSS-----
T ss_pred HHHHHhCC-CCCCCHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHHHhhCCCce-E-CCCCCeEEEEECCC-----
Confidence 88877654 567899999999999975 47889999999999999999999866887 4 46667889998863
Q ss_pred CCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEeeCChhhHHHHHHHHHHH
Q 014936 353 IIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFAVDPYSLEECLDRIKSF 404 (415)
Q Consensus 353 ~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~~~l~~~l~~l~~~ 404 (415)
+..++...+. ++||.+.||..|+.++++||+++ ++++++.+++.|+++
T Consensus 315 --~~~~~~~~l~-~~gi~v~~g~~~~~~~~iRis~~-~~~~i~~~~~~l~~~ 362 (363)
T 3ffh_A 315 --EAGTIFSYLE-KNGYITRSGAALGFPTAVRITIG-KEEDNSAVIALLEKL 362 (363)
T ss_dssp --CHHHHHHHHH-HTTEECEETTTTTCTTEEEEECC-CHHHHHHHHHHHHHH
T ss_pred --CHHHHHHHHH-HCCeEEEeCccCCCCCeEEEECC-CHHHHHHHHHHHHHh
Confidence 4667777665 57999999999988899999998 889999999998875
No 45
>2zyj_A Alpha-aminodipate aminotransferase; alpha-aminoadipate aminotransferase; HET: PGU; 1.67A {Thermus thermophilus} PDB: 2egy_A* 2dtv_A* 2zg5_A* 2zp7_A* 2z1y_A* 3cbf_A*
Probab=100.00 E-value=9.3e-46 Score=351.15 Aligned_cols=371 Identities=21% Similarity=0.312 Sum_probs=300.0
Q ss_pred cccCCccCCcchhhHHHHHHHhhhcccccccCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcC--CCCCCCCCCCcH
Q 014936 3 ISNGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSE--KFNGYAPTAGLP 80 (415)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~--~~~~y~~~~g~~ 80 (415)
+|++.....++ .++.+... . .+++++||+.|.|+.. ..+++.+.+++.+.+... ....|++..|..
T Consensus 10 ~~~~~~~~~~~--~~~~~~~~----~----~~~~~i~l~~g~~~~~--~~~~~~v~~a~~~~~~~~~~~~~~y~~~~~~~ 77 (397)
T 2zyj_A 10 FGKGAGRIQAS--TIRELLKL----T----QRPGILSFAGGLPAPE--LFPKEEAAEAAARILREKGEVALQYSPTEGYA 77 (397)
T ss_dssp SCGGGGGCCCC--HHHHHHHH----H----TSTTCEEESSCCCCGG--GCCHHHHHHHHHHHHHHHHHHHTSCCCTTCCH
T ss_pred hhhhhcccCch--HHHHHHhh----c----cCCCceecCCCCCCch--hCCHHHHHHHHHHHHHhcchhhhCCCCCCCCH
Confidence 55666665555 34444331 1 2457899999987532 336788999998887642 235788878999
Q ss_pred HHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCC
Q 014936 81 LTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWE 160 (415)
Q Consensus 81 ~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~ 160 (415)
++|+++++++ ++++++|++|+|+++++.+++.++.++||+|+++.|+|+++...++..|.++..++.+++ +
T Consensus 78 ~l~~~la~~~------g~~~~~v~~~~g~~~al~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~---~ 148 (397)
T 2zyj_A 78 PLRAFVAEWI------GVRPEEVLITTGSQQALDLVGKVFLDEGSPVLLEAPSYMGAIQAFRLQGPRFLTVPAGEE---G 148 (397)
T ss_dssp HHHHHHHHHH------TSCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHTTCCEEEEEEEETT---E
T ss_pred HHHHHHHHHh------CCChhhEEEeccHHHHHHHHHHHhCCCCCEEEEeCCCcHHHHHHHHHcCCEEEecCcCCC---C
Confidence 9999999999 467889999999999999999999999999999999999999999999999999987542 3
Q ss_pred CChhHHHhhcCC-CceEE-EecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCC---C
Q 014936 161 VDLDDIESLADQ-NTVAL-VIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGST---V 235 (415)
Q Consensus 161 ~~~~~l~~~~~~-~~~~v-~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~---~ 235 (415)
+|+++|++.+++ +++++ ++++|+||||.+++.+++++|+++|+++|+++|+||+|+.+.+++....++..++.+ +
T Consensus 149 ~d~~~l~~~l~~~~~~~v~~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~ 228 (397)
T 2zyj_A 149 PDLDALEEVLKRERPRFLYLIPSFQNPTGGLTPLPARKRLLQMVMERGLVVVEDDAYRELYFGEARLPSLFELAREAGYP 228 (397)
T ss_dssp ECHHHHHHHHHHCCCSCEEECCBSCTTTCCBCCHHHHHHHHHHHHHHTCCEEEECTTTTCBCSSCCCCCHHHHHHHHTCC
T ss_pred CCHHHHHHHHhhcCCeEEEECCCCcCCCCCcCCHHHHHHHHHHHHHcCCEEEEeCCcccccCCCCCCCchhhhCcccCCC
Confidence 899999998875 67777 578999999999999999999999999999999999999998876655555555544 6
Q ss_pred CeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhhc-cccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHH
Q 014936 236 PILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYF-DILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQ 314 (415)
Q Consensus 236 ~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~ 314 (415)
+++++.|+||+|+ +|+|+||+++++ ++++.+.... ..+.+.+++.+.++.++|+....+++++.++++++
T Consensus 229 ~~i~~~s~sK~~~-~G~r~G~~~~~~--------~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~ 299 (397)
T 2zyj_A 229 GVIYLGSFSKVLS-PGLRVAFAVAHP--------EALQKLVQAKQGADLHTPMLNQMLVHELLKEGFSERLERVRRVYRE 299 (397)
T ss_dssp CEEEEEESTTTTC-GGGCCEEEECCH--------HHHHHHHHHHHHHHSSCCHHHHHHHHHHHTTTHHHHHHHHHHHHHH
T ss_pred eEEEEeccccccc-ccceeEEEecCH--------HHHHHHHHHHHhhcCCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 7899999999988 999999999864 6777776553 23355688999999999986422568888899999
Q ss_pred HHHHHHHHhhc-CC-CCcCCCCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCC----CCCeEEEEee
Q 014936 315 SVDICYNKIKE-IP-CISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVG----LKNWLRVTFA 388 (415)
Q Consensus 315 ~~~~l~~~l~~-~~-~~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~----~~~~iRi~~~ 388 (415)
+++.+.+.|++ +| ++. +..|.+|+|+|++++.. .+..++...+++ +||.+.||..|+ .++++||+++
T Consensus 300 ~~~~l~~~L~~~~~~g~~-~~~~~~g~~~~~~~~~~-----~~~~~~~~~l~~-~gi~v~~g~~f~~~~~~~~~iRis~~ 372 (397)
T 2zyj_A 300 KAQAMLHALDREVPKEVR-YTRPKGGMFVWMELPKG-----LSAEGLFRRALE-ENVAFVPGGPFFANGGGENTLRLSYA 372 (397)
T ss_dssp HHHHHHHHHHHHSCTTSE-ECCCSBSSEEEEECSTT-----CCHHHHHHHHHH-TTEEEEESGGGCTTSCCTTEEEEECS
T ss_pred HHHHHHHHHHHHCCCCeE-EccCCccEEEEEEcCCC-----CCHHHHHHHHHH-CCCEEechHHhcCCCCCCCeEEEEcC
Confidence 99999999986 67 577 44688899999998641 246677777755 499999998885 3589999997
Q ss_pred C-ChhhHHHHHHHHHHHHHHHHH
Q 014936 389 V-DPYSLEECLDRIKSFYQRHAK 410 (415)
Q Consensus 389 ~-~~~~l~~~l~~l~~~~~~~~~ 410 (415)
. +++++++++++|+++++++.+
T Consensus 373 ~~~~~~i~~~~~~l~~~l~~~~~ 395 (397)
T 2zyj_A 373 TLDREGIAEGVRRLGRALKGLLA 395 (397)
T ss_dssp SSCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHHh
Confidence 5 689999999999999987653
No 46
>3g0t_A Putative aminotransferase; NP_905498.1, putative aspartate aminotransferase, structural genomics, joint center for structural genomics; HET: MSE LLP PE4; 1.75A {Porphyromonas gingivalis}
Probab=100.00 E-value=8.3e-46 Score=355.99 Aligned_cols=352 Identities=16% Similarity=0.198 Sum_probs=296.8
Q ss_pred cCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHH
Q 014936 33 NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQA 112 (415)
Q Consensus 33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~a 112 (415)
.++++++|+.|++. +++++.+++++.+.+..+....|++..|..++|+++++++++.+|..+++++|++|+|++++
T Consensus 42 ~g~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~la~~~~~~~g~~~~~~~i~~t~g~t~a 117 (437)
T 3g0t_A 42 TGTKFCRMEMGVPG----LPAPQIGIETEIQKLREGVASIYPNLDGLPELKQEASRFAKLFVNIDIPARACVPTVGSMQG 117 (437)
T ss_dssp HTCCCEECCCCSCC----SCCCHHHHHHHHHHHHHTGGGSCCCTTCCHHHHHHHHHHHHHHHCCCCCGGGEEEESHHHHH
T ss_pred cCCCEEeccCcCCC----CCCCHHHHHHHHHHHhCCcCcCCCCCCChHHHHHHHHHHHHHhhCCCCCcccEEEeCCHHHH
Confidence 36789999999964 67789999999998876443689988899999999999999888888899999999999999
Q ss_pred HHHHHHHhc--CCCC--EEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhc-CCCceEEEecCCCCccc
Q 014936 113 IDVAMALLS--RPGA--NILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLA-DQNTVALVIINPGNPCG 187 (415)
Q Consensus 113 l~~~~~~l~--~~gd--~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~v~i~~p~nptG 187 (415)
+.+++.++. ++|| +|+++.|+|.++...++..|.+++.++++ ++++.+|++.|++++ +++++++++++|+||||
T Consensus 118 l~~~~~~l~~~~~gd~~~Vl~~~p~~~~~~~~~~~~g~~~~~v~~~-~~~~~~d~~~l~~~l~~~~~~~v~l~~p~nptG 196 (437)
T 3g0t_A 118 CFVSFLVANRTHKNREYGTLFIDPGFNLNKLQCRILGQKFESFDLF-EYRGEKLREKLESYLQTGQFCSIIYSNPNNPTW 196 (437)
T ss_dssp HHHHHHHHTTSCTTCSCCEEEEESCCHHHHHHHHHHTCCCEEEEGG-GGCTTHHHHHHHHHHTTTCCCEEEEESSCTTTC
T ss_pred HHHHHHHHhcCCCCCccEEEEeCCCcHhHHHHHHHcCCEEEEEeec-CCCCccCHHHHHHHHhcCCceEEEEeCCCCCCC
Confidence 999999998 9999 99999999999999999999999999986 456678999999999 67889999999999999
Q ss_pred cCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcc----cc-cccCC-CCCeEEEccCccccCCCCceEEEEEeeC
Q 014936 188 NVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFV----PM-GVFGS-TVPILTLGSLSKRWIVPGWRLGWFVTTD 261 (415)
Q Consensus 188 ~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~----~~-~~~~~-~~~~i~~~s~sK~~~~~G~r~G~~~~~~ 261 (415)
.+++.+++++|+++|+++|+++|+||+|+.+.+++.... ++ ..+.. .++++++.|+||.++++|+|+||+++++
T Consensus 197 ~~~~~~~l~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~ 276 (437)
T 3g0t_A 197 QCMTDEELRIIGELATKHDVIVIEDLAYFGMDFRKDYSHPGEPLYQPSVANYTDNYILALSSSKAFSYAGQRIGVLMISG 276 (437)
T ss_dssp CCCCHHHHHHHHHHHHHTTCEEEEECTTTTCCTTSCCCSTTSSCCCCCGGGTCSCEEEEEESTTTTSCGGGCCEEEEECH
T ss_pred CcCCHHHHHHHHHHHHHCCcEEEEEcchhhcccCCCcCcccccchhhccCCCCCcEEEEEcCccCCCCccceeEEEEECH
Confidence 999999999999999999999999999999887632211 11 33333 5678999999999989999999999965
Q ss_pred CCCCCChHHHHH-H-----------------HHhhc-cccCCchhHHHHHHHHhhCCCcHHH---HHHHHHHHHHHHHHH
Q 014936 262 PCGMFRKPKVVE-R-----------------MKKYF-DILGDPATFIQAAVPSILQQPDEVF---FKKTLNLLKQSVDIC 319 (415)
Q Consensus 262 ~~~~~~~~~~~~-~-----------------~~~~~-~~~~~~~~~~~~a~~~~l~~~~~~~---~~~~~~~~~~~~~~l 319 (415)
++++ . +.... ...++++++.+.++..+|+.. ..+ +++.+++++++++.+
T Consensus 277 --------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~-~~~~~~~~~~~~~~~~~~~~l 347 (437)
T 3g0t_A 277 --------KLYEREYPDLEESFGRLRFGEALSSSALYALSSGATHSAQWGMAAMLKAC-NDGEYNFRDSVIEYGRKARIM 347 (437)
T ss_dssp --------HHHHCBCGGGHHHHSCSBHHHHHHTTHHHHHHSSSCHHHHHHHHHHHHHH-HTTSCCHHHHHHHHHHHHHHH
T ss_pred --------HHhhhhhhcccccccccchhHHHHHHHHhhhcCCCCHHHHHHHHHHHhCc-HhHHHHHHHHHHHHHHHHHHH
Confidence 5666 5 55443 235678889999999998752 112 788999999999999
Q ss_pred HHHhhcCCCCcCCC------CC-CCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCC--CeEEEEeeC-
Q 014936 320 YNKIKEIPCISCPH------KP-EGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLK--NWLRVTFAV- 389 (415)
Q Consensus 320 ~~~l~~~~~~~~~~------~p-~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~--~~iRi~~~~- 389 (415)
.+.|+++ ++. +. .| .+++|+|++++. .+..++...++ ++||.+.|+..|+.. +++||+++.
T Consensus 348 ~~~L~~~-g~~-~~~~~~~~~~~~~~~~~~~~~~~------~~~~~l~~~L~-~~gi~v~~~~~~~~~~~~~iRis~~~~ 418 (437)
T 3g0t_A 348 KKMFLDN-GFN-IVYDKDGNEPLADGFYFTVGYKG------MDSSKLIEKFV-RYGMCAITLKTTGSKRNEAMRICTSLL 418 (437)
T ss_dssp HHHHHTT-TEE-ESSCEETTEECCSSSEEEEEETT------CCHHHHHHHHH-HTTEECEESTTTTCCCTTCEEEECSSS
T ss_pred HHHHHHc-CCE-EeccccCCCCCceeEEEEEecCC------CCHHHHHHHHH-HcCeEEeeccccCCCCCCEEEEEEecC
Confidence 9999998 777 43 25 889999998862 25677777775 569999999988763 789999964
Q ss_pred ChhhHHHHHHHHHHHHHH
Q 014936 390 DPYSLEECLDRIKSFYQR 407 (415)
Q Consensus 390 ~~~~l~~~l~~l~~~~~~ 407 (415)
+++++++++++|++++++
T Consensus 419 ~~e~i~~~~~~l~~~~~~ 436 (437)
T 3g0t_A 419 PESQFPDLEKRLQMLNAE 436 (437)
T ss_dssp CGGGHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHhc
Confidence 899999999999988753
No 47
>3t18_A Aminotransferase class I and II; PSI-biology, MCSG, midwest center for structural genomics, P 5'-phosphate binding; HET: PLP; 2.86A {Anaerococcus prevotii} PDB: 4emy_A*
Probab=100.00 E-value=3.2e-45 Score=349.24 Aligned_cols=379 Identities=17% Similarity=0.167 Sum_probs=292.5
Q ss_pred CccccCCccCCcchhhHHHHHHHhhhcccccccCcceeEecccCC-CCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCc
Q 014936 1 MEISNGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDP-TVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGL 79 (415)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~-~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~ 79 (415)
|.++++.....++ .+........+.... .+++++++|+.|+| +...++++++.+.+++.+.... ....|++..|.
T Consensus 6 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~~-~g~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~-~~~~Y~~~~g~ 81 (413)
T 3t18_A 6 MTIKRATWNNGPD--LAFDINNKANAAIEK-YGREAVINAALGTLLDDKGKIIALPSVYDRLDEMDRS-HIASYAPIEGE 81 (413)
T ss_dssp SSCTTTCCCCCCC--HHHHHHHHHHHHHHH-HCGGGCEECCSCCCBCTTSCBCCCHHHHHHHHHSCHH-HHHSCCCTTCC
T ss_pred hhhhhcccCCCCC--hHHHHHHHHhhhhhh-ccccceEeccccCccCCCCCcCChHHHHHHHHhcCcc-cccCcCCCCCC
Confidence 3456777777777 555555544333211 23678999999986 2223467889999988764332 23478888899
Q ss_pred HHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCC
Q 014936 80 PLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGW 159 (415)
Q Consensus 80 ~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~ 159 (415)
+++|+++++++....+. .++++|++|+|+++++..++.+++++||+|+++.|+|..+...++..|.+++.++..+++ +
T Consensus 82 ~~lr~~la~~~~~~~~~-~~~~~i~~t~g~~~al~~~~~~~~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~-~ 159 (413)
T 3t18_A 82 KDYRKIVIDTLFGPYKP-EGYISAIATPGGTGAIRSAIFSYLDEGDPLICHDYYWAPYRKICEEFGRNFKTFEFFTDD-F 159 (413)
T ss_dssp HHHHHHHHHHHHGGGCC-SSEEEEEEESHHHHHHHHHHHHHCCSSCEEEEESSCCTHHHHHHHHHTCEEEEECCBCTT-S
T ss_pred HHHHHHHHHHHhcccCc-cccCcEEEcCccHHHHHHHHHHhcCCCCEEEECCCCcccHHHHHHHhCCeEEEeeccCCC-C
Confidence 99999999998654431 144599999999999999999999999999999999999999999999999999875433 7
Q ss_pred CCChhHHHhhcCC----Cce-EEEecCC-CCccccCCCHHHHHHHHHHHh------hcCcEEEEccccCCcccCCCCccc
Q 014936 160 EVDLDDIESLADQ----NTV-ALVIINP-GNPCGNVYSYQHLQKLAETAN------KLKTLVIADEVYGHLVFGDKPFVP 227 (415)
Q Consensus 160 ~~~~~~l~~~~~~----~~~-~v~i~~p-~nptG~~~~~~~l~~i~~~~~------~~~~~li~De~~~~~~~~~~~~~~ 227 (415)
.+|++.|++.+++ +++ ++++++| |||||.+++.+++++|+++|+ ++|+++|+||+|.++.+.+....+
T Consensus 160 ~~d~~~l~~~l~~~~~~~~~~~vi~~~p~~NPtG~~~~~~~l~~l~~~~~~~~~~~~~~~~li~De~y~~~~~~~~~~~~ 239 (413)
T 3t18_A 160 AFNIDVYKEAIDEGIRDSDRIASLINSPGNNPTGYSLSDEEWDEVITFLKEKAEDKDKKITLIVDVAYLEFAGDGDQQRK 239 (413)
T ss_dssp SBCHHHHHHHHHHHHHHCSEEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTTSTTCEEEEEEECTTGGGSSSSSTTTG
T ss_pred CcCHHHHHHHHHHHhhcCCCEEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHHhhccCCcEEEEEecccccccCChhhHHH
Confidence 8999999998875 566 7788899 999999999999999999999 899999999999999887764444
Q ss_pred ccc-cC-CCCC--eEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhhcc-----ccCCchhHHHHHHHHhhC
Q 014936 228 MGV-FG-STVP--ILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFD-----ILGDPATFIQAAVPSILQ 298 (415)
Q Consensus 228 ~~~-~~-~~~~--~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~a~~~~l~ 298 (415)
+.. .. ..++ +++++||||.|+++|+|+||++++.. ++++++.+..... ....++..+|.++..+++
T Consensus 240 ~~~~~~~~~~~~~~i~~~S~sK~~~~~G~riG~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~ 314 (413)
T 3t18_A 240 FFEKFSNLPRNLFVVVAFSMSKSHTAYGLRSGAAVGISS-----SKEIIEEFEASLAHSARCNWSNGTHAAQNILIELER 314 (413)
T ss_dssp GGGGGTTCCTTEEEEEEEEHHHHTTCGGGCCEEEEEEES-----CHHHHHHHHHHHHHHHHHHTSSCCHHHHHHHHHTTS
T ss_pred HHHHHhhcCCCeeEEEEEecCccCCCcCcCcEEEEEecC-----CHHHHHHHHHHHHHhhhccccCCChHHHHHHHHHhc
Confidence 322 22 1234 58899999999999999999998310 1267777765422 124578889999988887
Q ss_pred CCc----HHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcC
Q 014936 299 QPD----EVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPG 374 (415)
Q Consensus 299 ~~~----~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g 374 (415)
+.. .++.++.+++++++++.+.+.|+++ ++. +..|.+++|+|+++. +..++...+ .++||.+.||
T Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~-~~~~~~~~~~~~~~~--------~~~~~~~~l-~~~gv~v~~g 383 (413)
T 3t18_A 315 AENKKIYEQELVDLRNMLKSRADVFVTAAKEN-KLT-MIPYFGGFFTFIPTD--------KAFDIVKDL-EKENIFTIPS 383 (413)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TCC-CBCCCSSSCEEEECS--------CHHHHHHHH-HHTTEECEEC
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CCC-ccCCCceEEEEeCCC--------CHHHHHHHH-HhCCEEEecC
Confidence 531 2345567788999999999999988 787 457889999998763 466776654 7789999998
Q ss_pred CCCCCCCeEEEEee-CChhhHHHHHHHHHHHHHHHH
Q 014936 375 TAVGLKNWLRVTFA-VDPYSLEECLDRIKSFYQRHA 409 (415)
Q Consensus 375 ~~~~~~~~iRi~~~-~~~~~l~~~l~~l~~~~~~~~ 409 (415)
++++||+++ .+++++ +++|.++++++.
T Consensus 384 -----~~~iRis~~~~~~~~~---l~~l~~~l~~~~ 411 (413)
T 3t18_A 384 -----AKGIRVAICGVGEEKI---PKLVQRLAFYTN 411 (413)
T ss_dssp -----SSEEEECTTTSCGGGH---HHHHHHHHHHHH
T ss_pred -----CCceEEEEeeCCHHHH---HHHHHHHHHHHh
Confidence 479999996 467776 888888887754
No 48
>2x5f_A Aspartate_tyrosine_phenylalanine pyridoxal-5' phosphate-dependent aminotransferase...; HET: PLP EPE; 1.80A {Staphylococcus aureus}
Probab=100.00 E-value=8.7e-46 Score=355.02 Aligned_cols=348 Identities=16% Similarity=0.239 Sum_probs=285.8
Q ss_pred cceeEecccCC-CCCCCCCCcHHH--HHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCc---EEEeCC
Q 014936 35 KKVISLAMGDP-TVHSCFHTTHVA--TEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPND---VFVTSG 108 (415)
Q Consensus 35 ~~~i~l~~g~~-~~~~~~~~~~~~--~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~---i~i~~g 108 (415)
++++||+.|+| + ++.++.+ .+++.+.+.......|+++.|..++|+++|+++.+.. .++++++ |++|+|
T Consensus 47 ~~~i~l~~g~~~~----~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~-~~~~~~~~~~i~~t~g 121 (430)
T 2x5f_A 47 STTYNATIGMATN----KDGKMFASSLDAMFNDLTPDEIFPYAPPQGIEELRDLWQQKMLRDN-PELSIDNMSRPIVTNA 121 (430)
T ss_dssp TCSEECCCSSCEE----TTEECCCHHHHTTBSSCCGGGTSSCCCTTCCHHHHHHHHHHHHHHC-TTCCGGGBCCCEEESH
T ss_pred CCcEEeeeeeccC----CCCchhhHHHHHHHHhcCcccccccCCCCCCHHHHHHHHHHHhccC-cccCCCccceEEEcCC
Confidence 56899999997 4 3334444 6666555543235689988899999999999998764 6678888 999999
Q ss_pred hHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHh-CCCeEEEeeccCCCCCCCChhHHHhhcCC---CceEEEecCCCC
Q 014936 109 CTQAIDVAMALLSRPGANILLPRPGFPIYELSAAF-RHIEVRHFDLLPDKGWEVDLDDIESLADQ---NTVALVIINPGN 184 (415)
Q Consensus 109 ~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~l~~~~~~---~~~~v~i~~p~n 184 (415)
+++++..++.+++++||+|+++.|+|+++...++. .|.++..++.++++ +.+|+++|++.+++ +++++++++|+|
T Consensus 122 ~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~g~~~~~~~~~~~~-~~~d~~~l~~~l~~~~~~~~~v~i~~p~n 200 (430)
T 2x5f_A 122 LTHGLSLVGDLFVNQDDTILLPEHNWGNYKLVFNTRNGANLQTYPIFDKD-GHYTTDSLVEALQSYNKDKVIMILNYPNN 200 (430)
T ss_dssp HHHHHHHHHHHHCCTTCEEEEESSCCTHHHHHHTTTTCCEEEEECCBCTT-SCBCSHHHHHHHHHCCSSEEEEEECSSCT
T ss_pred chHHHHHHHHHHhCCCCEEEEcCCcCccHHHHHHHhcCCeEEEEeccCcc-CCcCHHHHHHHHHhcCCCCEEEEEcCCCC
Confidence 99999999999999999999999999999999999 99999999886533 67999999998876 788999999999
Q ss_pred ccccCCCHHHHHHHHHHHhh-----cCcEEEEccccCCcccCCCCccccc-ccCC-CCC---eEEEccCccccCCCCceE
Q 014936 185 PCGNVYSYQHLQKLAETANK-----LKTLVIADEVYGHLVFGDKPFVPMG-VFGS-TVP---ILTLGSLSKRWIVPGWRL 254 (415)
Q Consensus 185 ptG~~~~~~~l~~i~~~~~~-----~~~~li~De~~~~~~~~~~~~~~~~-~~~~-~~~---~i~~~s~sK~~~~~G~r~ 254 (415)
|||.+++.+++++|+++|++ +|+++|+||+|.++.+++....++. .+.. .++ +++++|+||.|+++|+|+
T Consensus 201 ptG~~~~~~~l~~i~~~~~~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~ri 280 (430)
T 2x5f_A 201 PTGYTPTHKEVTTIVEAIKALANKGTKVIAVVDDAYYGLFYEDVYTQSLFTALTNLHSNAILPIRLDGATKEFFAWGFRV 280 (430)
T ss_dssp TTCCCCCHHHHHHHHHHHHHHHHTTCEEEEEEECTTTTCBCSSSCCSCHHHHHHTTCCTTEEEEEEEEHHHHTTCGGGCC
T ss_pred CCCCcCCHHHHHHHHHHHHhhhhccCCEEEEEehhcccccCCcccchHHHHHHhhccCCcceEEEEEecccCCCCCCCCe
Confidence 99999999999999999999 9999999999999988765444443 4432 456 899999999998899999
Q ss_pred EEEEe---eCCCCCCChHHHHHHHHhhcc-----ccCCchhHHHHHHHHhhC-CCc-HHHHHHHHHHHHHHHHHHHHHhh
Q 014936 255 GWFVT---TDPCGMFRKPKVVERMKKYFD-----ILGDPATFIQAAVPSILQ-QPD-EVFFKKTLNLLKQSVDICYNKIK 324 (415)
Q Consensus 255 G~~~~---~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~a~~~~l~-~~~-~~~~~~~~~~~~~~~~~l~~~l~ 324 (415)
||+++ ++ ++++.+..... .+.+++++.|.++.++|+ ... .+.+++.+++++++++.+.+.|+
T Consensus 281 G~~~~~~~~~--------~~~~~l~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~ 352 (430)
T 2x5f_A 281 GFMTFGTSDQ--------TTKEVLEAKVKGLIRSNISSGPLPTQSAVKHVLKNNKQFDKEIEQNIQTLKERYEVTKEVVY 352 (430)
T ss_dssp EEEEEBCCCH--------HHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred EEEEEecCCH--------HHHHHHHHHHhhhhhcccCCCChHHHHHHHHHHccChHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99998 54 67777765432 346789999999999997 631 13334488999999999999998
Q ss_pred ----cCCCCcCCCCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEee-CChhhHHHHHH
Q 014936 325 ----EIPCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFA-VDPYSLEECLD 399 (415)
Q Consensus 325 ----~~~~~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~-~~~~~l~~~l~ 399 (415)
+. ++. +..|.+|+|+|++++. .+..++...+++++||.+.|| .++++||+++ .++++++++++
T Consensus 353 ~~~~~~-g~~-~~~~~~g~~~~~~~~~------~~~~~~~~~l~~~~gi~v~~g----~~~~iRis~~~~~~e~i~~~~~ 420 (430)
T 2x5f_A 353 ADQYHS-HWQ-AYDFNSGYFMAIKVHD------VDPEALRKHLIDKYSIGVIAL----NATDIRIAFSCVEKDDIPHVFD 420 (430)
T ss_dssp CGGGTT-TEE-ECCCCBSSEEEEEESS------SCHHHHHHHHHHHHCEECEEC----SSSEEEEEGGGSCGGGHHHHHH
T ss_pred hhCCCC-Cce-eeCCCceEEEEeCCCC------CCHHHHHHHHHHhCCEEEecC----CCCeEEEEEecCCHHHHHHHHH
Confidence 55 676 4477888999998861 256778888766589999998 3579999997 88999999999
Q ss_pred HHHHHHHHH
Q 014936 400 RIKSFYQRH 408 (415)
Q Consensus 400 ~l~~~~~~~ 408 (415)
+|+++++++
T Consensus 421 ~l~~~l~~~ 429 (430)
T 2x5f_A 421 SIAKAIDDL 429 (430)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHhc
Confidence 999998754
No 49
>3ly1_A Putative histidinol-phosphate aminotransferase; structural G joint center for structural genomics, JCSG; HET: MSE PLP CIT; 1.80A {Erwinia carotovora atroseptica}
Probab=100.00 E-value=7.2e-45 Score=339.74 Aligned_cols=335 Identities=17% Similarity=0.286 Sum_probs=287.1
Q ss_pred cCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHH
Q 014936 33 NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQA 112 (415)
Q Consensus 33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~a 112 (415)
.++.+++|+.|.+. +++++.+++++.+.+.. ...|++ .+..++|+.+++++ ++++++|++|+|++++
T Consensus 14 ~~~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~--~~~y~~-~~~~~l~~~la~~~------~~~~~~i~~~~g~~~a 80 (354)
T 3ly1_A 14 STDNPIRINFNENP----LGMSPKAQAAARDAVVK--ANRYAK-NEILMLGNKLAAHH------QVEAPSILLTAGSSEG 80 (354)
T ss_dssp CSSSCEECSSCCCS----SCCCHHHHHHHHHTGGG--TTSCCH-HHHHHHHHHHHHHT------TSCGGGEEEESHHHHH
T ss_pred CCCceEEccCCCCC----CCCCHHHHHHHHHHHhh--CcCCCC-CchHHHHHHHHHHh------CCChHHEEEeCChHHH
Confidence 47789999999854 67889999999998774 457865 57899999999998 4678999999999999
Q ss_pred HHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcC--CCceEEEecCCCCccccCC
Q 014936 113 IDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLAD--QNTVALVIINPGNPCGNVY 190 (415)
Q Consensus 113 l~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~v~i~~p~nptG~~~ 190 (415)
+.+++.++.++||+|+++.|+|+++...++..|.+++.++.++ ++.+|+++|++.++ ++++++++++|+||||.++
T Consensus 81 ~~~~~~~l~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~--~~~~d~~~l~~~l~~~~~~~~v~l~~p~nptG~~~ 158 (354)
T 3ly1_A 81 IRAAIEAYASLEAQLVIPELTYGDGEHFAKIAGMKVTKVKMLD--NWAFDIEGLKAAVAAYSGPSIVYLVNPNNPTGTIT 158 (354)
T ss_dssp HHHHHHHHCCTTCEEEEESSSCTHHHHHHHHTTCEEEEECCCT--TSCCCHHHHHHHHHTCSSCEEEEEESSCTTTCCCC
T ss_pred HHHHHHHHhCCCCeEEECCCCchHHHHHHHHcCCEEEEecCCC--CCCCCHHHHHHHhccCCCCCEEEEeCCCCCcCCCc
Confidence 9999999999999999999999999999999999999998753 47799999999998 7899999999999999999
Q ss_pred CHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCC-CCeEEEccCccccCCCCceEEEEEeeCCCCCCChH
Q 014936 191 SYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGST-VPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKP 269 (415)
Q Consensus 191 ~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~-~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~ 269 (415)
+.+++.+|+++| ++|+++|+||+|+++.+++.....+...+.. +++++++|+||.|+++|+|+||+++++
T Consensus 159 ~~~~l~~l~~~~-~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~-------- 229 (354)
T 3ly1_A 159 PADVIEPWIASK-PANTMFIVDEAYAEFVNDPRFRSISPMITQGAENIILLKTFSKIHAMAGMRVGYAVAHP-------- 229 (354)
T ss_dssp CHHHHHHHHHTC-CTTEEEEEECTTGGGCCCTTCCCSHHHHHTTCSSEEEEEESSSTTCCGGGCCEEEECCH--------
T ss_pred CHHHHHHHHHhC-CCCeEEEEeccHHHhccccccCCHHHHhhhcCCCEEEEeeChhhccChhhhheeeecCH--------
Confidence 999999999999 8999999999999988776544444444444 678999999999999999999999854
Q ss_pred HHHHHHHhhccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCccc
Q 014936 270 KVVERMKKYFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSL 349 (415)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~ 349 (415)
++++.+...... ++++++.+.++..+|+. .+++++.+++++++++.+.+.|+++ ++. + .|..|.|+|++++.
T Consensus 230 ~~~~~~~~~~~~-~~~~~~~~~a~~~~l~~--~~~~~~~~~~~~~~~~~l~~~l~~~-~~~-~-~~~~~~~~~~~~~~-- 301 (354)
T 3ly1_A 230 TVIALMGRYVAG-EKINFSGVDAALASMND--SAFITYSKKSNDVSRQILLKALEDL-KLP-Y-LPSEGNFVFHQLVV-- 301 (354)
T ss_dssp HHHHHHGGGTTC-SCCCHHHHHHHHHHTTC--HHHHHHHHHHHHHHHHHHHHHHHHH-TCC-B-CCCCSSEEEEECSS--
T ss_pred HHHHHHHHhcCC-CCCCHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHHHHHC-CCe-E-CCCCceEEEEECCC--
Confidence 688888776553 68899999999999985 3788999999999999999999988 777 4 46678889998863
Q ss_pred cCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEeeCChhhHHHHHHHHHHHHHH
Q 014936 350 LDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFAVDPYSLEECLDRIKSFYQR 407 (415)
Q Consensus 350 ~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~~~l~~~l~~l~~~~~~ 407 (415)
+..++...+ .++||.+. |..++.++++||+++ ++++++++++.|++++++
T Consensus 302 -----~~~~~~~~l-~~~gi~v~-g~~~~~~~~iRis~~-~~~~i~~~~~~l~~~l~~ 351 (354)
T 3ly1_A 302 -----PLKDYQTHM-ADAGVLIG-RAFPPADNWCRISLG-TPQEMQWVADTMREFRKK 351 (354)
T ss_dssp -----CHHHHHHHH-HHTTEECC-CCCTTCTTEEEEECC-CHHHHHHHHHHHHHHHHT
T ss_pred -----CHHHHHHHH-HHCCEEEe-ecCCCCCCEEEEEcC-CHHHHHHHHHHHHHHHHh
Confidence 456666666 46799998 777777899999997 688999999999988763
No 50
>3get_A Histidinol-phosphate aminotransferase; NP_281508.1, structural genomics, joint center for structural genomics; HET: LLP MSE; 2.01A {Campylobacter jejuni subsp}
Probab=100.00 E-value=8.4e-45 Score=340.69 Aligned_cols=333 Identities=18% Similarity=0.230 Sum_probs=283.4
Q ss_pred CcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHH
Q 014936 34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAI 113 (415)
Q Consensus 34 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al 113 (415)
.+++++|+.|.+. +++++.+++++.+.+. ....|++..+ .++|+++|+++ ++++++|++|+|+++++
T Consensus 29 ~~~~i~l~~~~~~----~~~~~~v~~a~~~~~~--~~~~y~~~~~-~~lr~~la~~~------~~~~~~v~~~~g~~~a~ 95 (365)
T 3get_A 29 VKEVIKLASNENP----FGTPPKAIECLRQNAN--KAHLYPDDSM-IELKSTLAQKY------KVQNENIIIGAGSDQVI 95 (365)
T ss_dssp CSCCEECSSCCCT----TCSCHHHHHHHHHHGG--GTTSCCCTTC-HHHHHHHHHHH------TCCGGGEEEESSHHHHH
T ss_pred CCceEEecCCCCC----CCCCHHHHHHHHHHHH--hhccCCCCCh-HHHHHHHHHHh------CCCcceEEECCCHHHHH
Confidence 4679999999864 6788999999999887 3457887666 89999999998 46789999999999999
Q ss_pred HHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHH
Q 014936 114 DVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQ 193 (415)
Q Consensus 114 ~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~ 193 (415)
.+++.+++++||+|+++.|+|..+...++..|.++..+++ +++++ +|+++++++++++++++++++|+||||.++|.+
T Consensus 96 ~~~~~~l~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~-~~~~~-~d~~~l~~~l~~~~~~v~~~~p~nptG~~~~~~ 173 (365)
T 3get_A 96 EFAIHSKLNSKNAFLQAGVTFAMYEIYAKQCGAKCYKTQS-ITHNL-DEFKKLYETHKDEIKLIFLCLPNNPLGECLDAS 173 (365)
T ss_dssp HHHHHHHCCTTCEEEECSSCCTHHHHHHHHHTCEEEECSS-SSCCH-HHHHHHHHHTTTTEEEEEEESSCTTTCCCCCHH
T ss_pred HHHHHHHhCCCCEEEEeCCChHHHHHHHHHcCCEEEEEec-CCCCC-CCHHHHHHHhCCCCCEEEEcCCCCCCCCCcCHH
Confidence 9999999999999999999999999999999999999987 34567 999999999998999999999999999999999
Q ss_pred HHHHHHHHHhhcCcEEEEccccCCccc--CCCCcc-cccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHH
Q 014936 194 HLQKLAETANKLKTLVIADEVYGHLVF--GDKPFV-PMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPK 270 (415)
Q Consensus 194 ~l~~i~~~~~~~~~~li~De~~~~~~~--~~~~~~-~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~ 270 (415)
++.+|+++| ++|+++|+||+|+.+.+ .+.... .....+..+++++++|+||.|+++|+|+||+++++ +
T Consensus 174 ~l~~l~~~~-~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~--------~ 244 (365)
T 3get_A 174 EATEFIKGV-NEDCLVVIDAAYNEFASFKDSKKHLEPCELIKEFDNVLYLGTFSKLYGLGGLRIGYGIANA--------N 244 (365)
T ss_dssp HHHHHHHTS-CTTSEEEEECTTHHHHHHHCGGGCCCHHHHHHHCTTEEEEEESSSTTSCTTTCCEEEEECH--------H
T ss_pred HHHHHHHhC-CCCcEEEEeCccHHHhcccCCcccccHhHHhccCCCEEEEeecchHhcCcchheEEEEcCH--------H
Confidence 999999999 56999999999998775 433222 22333445678999999999999999999999854 6
Q ss_pred HHHHHHhhccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCcccc
Q 014936 271 VVERMKKYFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLL 350 (415)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~ 350 (415)
+++.+..... .++++++.+.++..+|+. .+++++.+++++++++.+.+.|+++ ++. + .+..|.|+|++++..
T Consensus 245 ~~~~~~~~~~-~~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~l~~~l~~~-g~~-~-~~~~~~~~~~~~~~~-- 316 (365)
T 3get_A 245 IISAFYKLRA-PFNVSNLALKAAVAAMDD--DEFTEKTLENNFSQMELYKEFAKKH-NIK-I-IDSYTNFITYFFDEK-- 316 (365)
T ss_dssp HHHHHHHHSC-TTCSCHHHHHHHHHHHTC--HHHHHHHHHHHHHHHHHHHHHHHHT-TCE-E-CCCSSSEEEEECSSS--
T ss_pred HHHHHHHhcC-CCCcCHHHHHHHHHHhCC--HHHHHHHHHHHHHHHHHHHHHHHhC-CCE-E-CCCCCeEEEEECCCC--
Confidence 8888877654 356889999999999985 4788999999999999999999988 777 4 456677899988641
Q ss_pred CCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEeeCChhhHHHHHHHHHHHH
Q 014936 351 DDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFAVDPYSLEECLDRIKSFY 405 (415)
Q Consensus 351 ~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~~~l~~~l~~l~~~~ 405 (415)
+..++...+. ++||.+.||..|+ ++++|++++ ++++++++++.|++++
T Consensus 317 ----~~~~~~~~l~-~~gi~v~~g~~~~-~~~iRis~~-~~~~i~~l~~~l~~~l 364 (365)
T 3get_A 317 ----NSTDLSEKLL-KKGIIIRNLKSYG-LNAIRITIG-TSYENEKFFTEFDKIL 364 (365)
T ss_dssp ----CHHHHHHHHH-TTTEECEECGGGT-CSEEEEECC-CHHHHHHHHHHHHHHH
T ss_pred ----CHHHHHHHHH-HCCEEEEECccCC-CCEEEEEcC-CHHHHHHHHHHHHHHh
Confidence 4667777664 5699999999988 899999998 7889999999998765
No 51
>3euc_A Histidinol-phosphate aminotransferase 2; YP_297314.1, structur genomics, joint center for structural genomics, JCSG; HET: MSE; 2.05A {Ralstonia eutropha JMP134} SCOP: c.67.1.0
Probab=100.00 E-value=5.2e-44 Score=335.55 Aligned_cols=331 Identities=18% Similarity=0.292 Sum_probs=284.6
Q ss_pred CcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCC-CCCcEEEeCChHHH
Q 014936 34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKL-TPNDVFVTSGCTQA 112 (415)
Q Consensus 34 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~-~~~~i~i~~g~~~a 112 (415)
++.+++|+.|.+. +++++.+++++.+.+.......|++ .+..++|+++++++ ++ ++++|++|+|++++
T Consensus 29 ~~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~~~~~~y~~-~~~~~l~~~la~~~------g~~~~~~i~~~~g~t~a 97 (367)
T 3euc_A 29 SHGLVKLDAMENP----YRLPPALRSELAARLGEVALNRYPV-PSSEALRAKLKEVM------QVPAGMEVLLGNGSDEI 97 (367)
T ss_dssp CTTCEECCSSCCC----CCCCHHHHHHHHHHHHHHHTTCSCC-CCHHHHHHHHHHHH------TCCTTCEEEEEEHHHHH
T ss_pred CCCeeEccCCCCC----CCCCHHHHHHHHHHhhhhhhhcCCC-CcHHHHHHHHHHHh------CCCCcceEEEcCCHHHH
Confidence 5689999999854 6788999999999887544567877 58899999999998 44 67899999999999
Q ss_pred HHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCC-CceEEEecCCCCccccCCC
Q 014936 113 IDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ-NTVALVIINPGNPCGNVYS 191 (415)
Q Consensus 113 l~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~v~i~~p~nptG~~~~ 191 (415)
+.+++.++.++||+|+++.|+|..+...++..|.++..++.++ ++.+|++++++++++ +++++++++|+||||.+++
T Consensus 98 ~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~ 175 (367)
T 3euc_A 98 ISMLALAAARPGAKVMAPVPGFVMYAMSAQFAGLEFVGVPLRA--DFTLDRGAMLAAMAEHQPAIVYLAYPNNPTGNLFD 175 (367)
T ss_dssp HHHHHHHTCCTTCEEEEEESCSCCSCHHHHTTTCEEEEEECCT--TSCCCHHHHHHHHHHHCCSEEEEESSCTTTCCCCC
T ss_pred HHHHHHHHcCCCCEEEEcCCCHHHHHHHHHHcCCeEEEecCCC--CCCCCHHHHHHHhhccCCCEEEEcCCCCCCCCCCC
Confidence 9999999999999999999999999999999999999999864 567999999999987 8999999999999999999
Q ss_pred HHHHHHHHHHHhhc--CcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChH
Q 014936 192 YQHLQKLAETANKL--KTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKP 269 (415)
Q Consensus 192 ~~~l~~i~~~~~~~--~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~ 269 (415)
.+++++|+++|++| |+++|+||+|+.+...+ . ...+...++++++.|+||. +++|+|+||+++++
T Consensus 176 ~~~l~~i~~~~~~~~~~~~li~De~~~~~~~~~--~--~~~~~~~~~~i~~~s~sK~-~~~G~r~G~~~~~~-------- 242 (367)
T 3euc_A 176 AADMEAIVRAAQGSVCRSLVVVDEAYQPFAQES--W--MSRLTDFGNLLVMRTVSKL-GLAGIRLGYVAGDP-------- 242 (367)
T ss_dssp HHHHHHHHHHTBTTSCBCEEEEECTTCCSSSCC--S--GGGGGTCTTEEEEEECCCT-TSCSCCEEEEEECH--------
T ss_pred HHHHHHHHHhhhhcCCCcEEEEeCcchhhcccc--h--HHHHhhCCCEEEEecchhh-cccccCceeeeeCH--------
Confidence 99999999999999 99999999999866332 2 2233445678999999999 99999999999864
Q ss_pred HHHHHHHhhccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCccc
Q 014936 270 KVVERMKKYFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSL 349 (415)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~ 349 (415)
++.+.+..... .++.+++.+.++..+|+. .+++++.+++++++++.+.+.|+++|++. + .|..|+|+|++++
T Consensus 243 ~~~~~~~~~~~-~~~~~~~~~~a~~~~l~~--~~~~~~~~~~~~~~~~~l~~~l~~~~g~~-~-~~~~~~~~~~~~~--- 314 (367)
T 3euc_A 243 QWLEQLDKVRP-PYNVNVLTEATALFALEH--VAVLDEQAAQLRAERSRVAEGMAAHGGVT-V-FPSAANFLLARVP--- 314 (367)
T ss_dssp HHHHHHGGGCC-SSCCCHHHHHHHHHHHTT--HHHHHHHHHHHHHHHHHHHHHHHTSTTCE-E-CCCSSSEEEEECS---
T ss_pred HHHHHHHHhCC-CCCCCHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHHHHhCCCcE-E-CCCCCeEEEEECC---
Confidence 67887776644 467899999999999986 67889999999999999999999998888 4 6777889998885
Q ss_pred cCCCCCHHHHHHHHHhhcCeEEEcCCCCCC--CCeEEEEeeCChhhHHHHHHHHHHHH
Q 014936 350 LDDIIDDIDFCFKLAKEESVIILPGTAVGL--KNWLRVTFAVDPYSLEECLDRIKSFY 405 (415)
Q Consensus 350 ~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~--~~~iRi~~~~~~~~l~~~l~~l~~~~ 405 (415)
+..++...+ .++||.+.+|..|+. .+++||+++ ++++++++++.|++++
T Consensus 315 -----~~~~l~~~l-~~~gi~v~~~~~~~~~~~~~iRis~~-~~~~i~~~~~~l~~~l 365 (367)
T 3euc_A 315 -----DAAQTFDRL-LARKVLIKNVSKMHPLLANCLRVTVS-TPEENAQFLEAFAASL 365 (367)
T ss_dssp -----CHHHHHHHH-HTTTEECEECGGGCGGGTTEEEEECC-CHHHHHHHHHHHHHHT
T ss_pred -----CHHHHHHHH-HHCCeEEEECCccCCCCCCEEEEecC-CHHHHHHHHHHHHHHh
Confidence 355666665 678999999988753 689999998 7899999999998775
No 52
>3rq1_A Aminotransferase class I and II; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta structure, cytosol; HET: AKG GOL; 2.20A {Veillonella parvula}
Probab=100.00 E-value=1.1e-44 Score=346.11 Aligned_cols=378 Identities=13% Similarity=0.156 Sum_probs=289.2
Q ss_pred ccCCccCCcchhhHHHHHHHhhhcccccccCcceeEecccCC-CCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHH
Q 014936 4 SNGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDP-TVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLT 82 (415)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~-~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~l 82 (415)
+.+.....++ .+........+.... .++.++++|+.|+| +...++++++.+.+++.+.... ....|++..|.+++
T Consensus 10 ~~~~~~~~~~--~~~~~~~~~~~~~~~-~g~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~-~~~~y~~~~g~~~l 85 (418)
T 3rq1_A 10 KHAKGKKLKD--VIFVTAGQAQADAKE-NGRENVVNGTLGAIHDEEGNLVFLKTVKEEYLSLSDS-EHVGYAPIAGIPDF 85 (418)
T ss_dssp TTTTTCCCCC--HHHHHHHHHHHHHHH-HCGGGCEECCSSCCBCTTSCBCCCHHHHHHHHTCCHH-HHHSCCCTTCCHHH
T ss_pred hhcCCCCCCc--hHHHHHHHHHhhhhh-hcCCCeEECCCCcccCCCCCccccHHHHHHHHHhccc-ccCCCCCCCChHHH
Confidence 3344444555 444544444333311 23668999999986 2123477889998888764432 23478888899999
Q ss_pred HHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCC
Q 014936 83 RRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVD 162 (415)
Q Consensus 83 r~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 162 (415)
|+++++++....+.. .+++|++|+|+++++..++.+++++||+|+++.|+|..+...++..|.+++.++..+++ +.+|
T Consensus 86 r~~ia~~~~~~~~~~-~~~~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~-~~~d 163 (418)
T 3rq1_A 86 LCAAEKECFGNFRPE-GHIRSIATAGGTGGIHHLIHNYTEPGDEVLTADWYWGAYRVICSDTGRTLVTYSLFDEH-NNFN 163 (418)
T ss_dssp HHHHHHHHHGGGCCS-SEEEEEEESHHHHHHHHHHHHHSCTTCEEEEESSCCTHHHHHHHHTTCEEEEECSBCTT-SSBC
T ss_pred HHHHHHHHhcccCcc-ccccEEECCchHHHHHHHHHHhcCCCCEEEECCCCchhHHHHHHHcCCEEEEEeeeCCC-CCcC
Confidence 999999997644311 12399999999999999999999999999999999999999999999999999985543 6799
Q ss_pred hhHHHhhcCC----Cce-EEEecCC-CCccccCCCHHHHHHHHHHHh------hcCcEEEEccccCCcccCCCCcccccc
Q 014936 163 LDDIESLADQ----NTV-ALVIINP-GNPCGNVYSYQHLQKLAETAN------KLKTLVIADEVYGHLVFGDKPFVPMGV 230 (415)
Q Consensus 163 ~~~l~~~~~~----~~~-~v~i~~p-~nptG~~~~~~~l~~i~~~~~------~~~~~li~De~~~~~~~~~~~~~~~~~ 230 (415)
++.|++.+++ +++ ++++++| +||||.+++.+++++|+++|+ ++|+++|+||+|.++.+++....++..
T Consensus 164 ~~~l~~~l~~~~~~~~~~~vi~~~p~~NPtG~~~~~~~l~~l~~~~~~~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~ 243 (418)
T 3rq1_A 164 HEAFQNRVNELAAKQTNVVVIFNTPGNNPTGYSIEDKDWDSILNFLKDLVAIGRNNVIIGIDVAYLDYSGEKDEVRAFFN 243 (418)
T ss_dssp HHHHHHHHHHHHHHCSEEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHHHTSSCEEEEEEECTTGGGSSCHHHHHGGGG
T ss_pred HHHHHHHHHHhhccCCCEEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHhhhccCCCeEEEEecccccccCChHHHHHHHH
Confidence 9999998874 555 7788899 999999999999999999999 899999999999998876543223222
Q ss_pred -cC-CCCC--eEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhhcc-----ccCCchhHHHHHHHHhhCCCc
Q 014936 231 -FG-STVP--ILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFD-----ILGDPATFIQAAVPSILQQPD 301 (415)
Q Consensus 231 -~~-~~~~--~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~a~~~~l~~~~ 301 (415)
.. ..++ +++++||||.|+++|+|+||+++... ++++++.+..... ....++..+|.++..+|++..
T Consensus 244 ~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~ 318 (418)
T 3rq1_A 244 KFSHLPKEILTCVCYSLSKGFTMYGQRVGAMIGISD-----DEEIADEFFEVNKSTSRATWSNICRPAMRTMANIVADPA 318 (418)
T ss_dssp GGTTCCTTEEEEEEEESTTTTTCCSSCCEEEEEEES-----SHHHHHHHHHHHHHHHHHHTSSCCHHHHHHHHHHHTCHH
T ss_pred HHHhcCCCceEEEEEeCCCCCcCcCCcceEEEEEeC-----CHHHHHHHHHHHHHHHhhccCCCchHHHHHHHHHhCCHH
Confidence 21 1234 58899999999999999999998210 1267777765432 124578899999999997632
Q ss_pred -----HHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCC
Q 014936 302 -----EVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTA 376 (415)
Q Consensus 302 -----~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~ 376 (415)
.+.+++.+++++++++.+.+.|+++ ++. +..|.+++|+|++++ +..++... |.++||.+.||.
T Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~~~~~~~~~~~~--------~~~~~~~~-l~~~gi~v~~g~- 386 (418)
T 3rq1_A 319 KFKEYEAERNCYYQLIRDRADIFKQEAAQV-GLP-MLPYRGGFFITIPTD--------SANAICEE-LKKEHIYVIALA- 386 (418)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-TCC-CCCCCSSSEEEEECT--------THHHHHHH-HHHTTEECEECS-
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCC-CCCCCceEEEEcCCC--------CHHHHHHH-HHhCCEEEecCC-
Confidence 1233466788899999999999988 787 447889999998774 45666654 577899999984
Q ss_pred CCCCCeEEEEee-CChhhHHHHHHHHHHHHHHH
Q 014936 377 VGLKNWLRVTFA-VDPYSLEECLDRIKSFYQRH 408 (415)
Q Consensus 377 ~~~~~~iRi~~~-~~~~~l~~~l~~l~~~~~~~ 408 (415)
+++||+++ .+++++++++++|+++++++
T Consensus 387 ----~~iRis~~~~~~~~i~~~~~~l~~~l~~~ 415 (418)
T 3rq1_A 387 ----NGIRIAACGIPKCQMTGLAEKIYNAMKSL 415 (418)
T ss_dssp ----SEEEEEGGGSCHHHHTTHHHHHHHHHHHT
T ss_pred ----CCeEEEEecCCHHHHHHHHHHHHHHHHHH
Confidence 78999997 69999999999999998754
No 53
>3asa_A LL-diaminopimelate aminotransferase; PLP dependent aminotransferase; 2.05A {Chlamydia trachomatis} PDB: 3asb_A*
Probab=100.00 E-value=5e-45 Score=346.36 Aligned_cols=352 Identities=18% Similarity=0.249 Sum_probs=271.1
Q ss_pred cCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcC----CCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCC
Q 014936 33 NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSE----KFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSG 108 (415)
Q Consensus 33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~----~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g 108 (415)
.++++++|+.|+++ +++++.+++++.+.+... ....|++..|..++|+++++++. .|. +++++|++|+|
T Consensus 31 ~~~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~~~~~~~~~~y~~~~g~~~lr~~la~~l~--~g~-~~~~~v~~~~G 103 (400)
T 3asa_A 31 PQHTVINLSIGDTT----QPLNASVAEAFASSIARLSSPTTCRGYGPDFGLPALRQKLSEDFY--RGF-VDAKEIFISDG 103 (400)
T ss_dssp TTSCCEECSSCCCC----CCCCHHHHHHHHHHHHHHTSSSCCCCCCCTTCCHHHHHHHHHTTS--TTS-SCGGGEEEESC
T ss_pred CCCceEeccCCCCC----CCCCHHHHHHHHHHHhcccccccccCCCCCCCCHHHHHHHHHHHH--cCC-CCHHHEEEccC
Confidence 36789999999864 567889999998877531 24578877899999999999964 343 67899999999
Q ss_pred hHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCe-EEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccc
Q 014936 109 CTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIE-VRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCG 187 (415)
Q Consensus 109 ~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG 187 (415)
+++++..++.. +++||+|+++.|+|+++...++..|.+ +..++.++++++..++++ . +++++|++++|+||||
T Consensus 104 ~~~al~~~~~~-~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~---~--~~~~~v~l~~p~nptG 177 (400)
T 3asa_A 104 AKVDLFRLLSF-FGPNQTVAIQDPSYPAYLDIARLTGAKEIIALPCLQENAFFPEFPE---D--THIDILCLCSPNNPTG 177 (400)
T ss_dssp HHHHHHHHHHH-HCSSCEEEEEESCCHHHHHHHHHTTCSEEEEEECCGGGTTCCCCCT---T--CCCSEEEEESSCTTTC
T ss_pred hHHHHHHHHHH-cCCCCEEEECCCCcHHHHHHHHHcCCcceEecccchhcCcccChhh---c--cCccEEEEeCCCCCCC
Confidence 99999987654 478999999999999999999999998 999987654444444432 1 4678999999999999
Q ss_pred cCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCC-CCCeEEEccCccccCCCCceEEEEEeeCCCCCC
Q 014936 188 NVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS-TVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMF 266 (415)
Q Consensus 188 ~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~ 266 (415)
.++|.+++++|+++|+++|+++|+||+|.++.+++....++..++. .+++++++|+||.|+++|+|+||+++++.....
T Consensus 178 ~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~GlriG~~~~~~~~~~~ 257 (400)
T 3asa_A 178 TVLNKDQLRAIVHYAIEHEILILFDAAYSTFISDPSLPKSIFEIPDARFCAIEINSFSKPLGFAGIRLGWTVIPQELTYA 257 (400)
T ss_dssp CCCCHHHHHHHHHHHHHTTCEEEEECTTGGGCCCTTSCSSGGGSTTGGGTEEEEEECCGGGTTTTCCCEEEECCTTCBCT
T ss_pred CcCCHHHHHHHHHHHHHcCCEEEEEchhhhhhcCCCCCCchhhCCCCCCceEEEecchhhcCCcchheeEEeeChhhccc
Confidence 9999999999999999999999999999988776543444545432 356899999999999999999999986521000
Q ss_pred ChHHHHHHHHhh-c-cccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEe
Q 014936 267 RKPKVVERMKKY-F-DILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLK 344 (415)
Q Consensus 267 ~~~~~~~~~~~~-~-~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~ 344 (415)
.... ++.+... . ....+++++.|.++..+|+.. ++++.+++++++++.+.+.|+++ ++. +..|.+|+|+|++
T Consensus 258 ~~~~-~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~---~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~~~~~~~~~~ 331 (400)
T 3asa_A 258 DGHF-VIQDWERFLSTTFNGASIPAQEAGVAGLSIL---PQLEAIHYYRENSDLLRKALLAT-GFE-VFGGEHAPYLWVK 331 (400)
T ss_dssp TSCB-HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHT---TTCHHHHHHHHHHHHHHHHHHHT-TCE-EEECSSSSEEEEE
T ss_pred hhhh-HHHHHHHHhccCccCCChHHHHHHHHHhCcH---HHHHHHHHHHHHHHHHHHHHHHC-CCe-eeCCCCceEEEEe
Confidence 0000 2333221 1 222467889999998888753 57788899999999999999987 777 4466788999998
Q ss_pred -cCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCC--CCeEEEEeeCChhhHHHHHHHHHHHHHHH
Q 014936 345 -LNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGL--KNWLRVTFAVDPYSLEECLDRIKSFYQRH 408 (415)
Q Consensus 345 -l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~--~~~iRi~~~~~~~~l~~~l~~l~~~~~~~ 408 (415)
++.. .+..++...+++++||.+.||..|+. ++++||++..+++++++++++|++++++.
T Consensus 332 ~~~~~-----~~~~~~~~~l~~~~gv~v~~g~~f~~~~~~~iRis~~~~~e~i~~~l~~l~~~~~~~ 393 (400)
T 3asa_A 332 PTQAN-----ISDRDLFDFFLREYHIAITPGIGFGRSGSGFVRFSSLGKREDILAACERLQMAPALQ 393 (400)
T ss_dssp CCCTT-----CCTTTHHHHHHHHHSEECEEGGGGCGGGTTCEEEECCSCHHHHHHHHHHHHC-----
T ss_pred ccCCC-----CCHHHHHHHHHHhCCEEEeChhHhCCCCCCEEEEEeeCCHHHHHHHHHHHHHHHHhh
Confidence 7531 13446777777778999999988863 57999998788999999999999888754
No 54
>7aat_A Aspartate aminotransferase; transferase(aminotransferase); HET: PLP; 1.90A {Gallus gallus} SCOP: c.67.1.1 PDB: 1ivr_A* 1map_A* 1maq_A* 1oxo_A* 1oxp_A* 1ama_A* 1tas_A* 1tat_A* 1tar_A* 8aat_A* 9aat_A* 1aka_A* 1akb_A* 1akc_A* 3pd6_A* 3hlm_A* 3pdb_A*
Probab=100.00 E-value=1.7e-44 Score=342.95 Aligned_cols=361 Identities=17% Similarity=0.155 Sum_probs=280.3
Q ss_pred hHHHHHHHhhhcccccccCcceeEecccCC-CCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhC
Q 014936 16 TIKGMLSLLMQSVDDEKNEKKVISLAMGDP-TVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDL 94 (415)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~-~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~ 94 (415)
.+......+..+. .+.+++|+.|.+ +.....++.+.+++++.+.........|++..|.+++|+++++++++.+
T Consensus 14 ~i~~~~~~~~~~~-----~~~~i~l~~g~~~d~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~ 88 (401)
T 7aat_A 14 PILGVTEAFKRDT-----NSKKMNLGVGAYRDDNGKPYVLNCVRKAEAMIAAKKMDKEYLPIAGLADFTRASAELALGEN 88 (401)
T ss_dssp HHHHHHHHHHHCC-----CTTCEECCCCSCCCTTSCCCCCHHHHHHHHHHHHTTCCCCCCCTTCCHHHHHHHHHHHHCTT
T ss_pred hhHHHHHHHhhCC-----CCCceeeeeeeEECCCCCEechHHHHHHHHHhcccccccCCCCCCCCHHHHHHHHHHhcCCC
Confidence 4555555444332 455899999997 5433334557899988887764345689988899999999999998777
Q ss_pred CCCCCCCcEEE--eCChHHHHHHHHHHhc---CCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhh
Q 014936 95 PYKLTPNDVFV--TSGCTQAIDVAMALLS---RPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESL 169 (415)
Q Consensus 95 ~~~~~~~~i~i--~~g~~~al~~~~~~l~---~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~ 169 (415)
|..+++++|++ |+|+++++.+++.++. ++||+|++++|+|..+...++..|.++..++.+.+.++.+|++.+++.
T Consensus 89 ~~~~~~~~i~~v~t~G~~~al~~~~~~l~~~~~~gd~Vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~ 168 (401)
T 7aat_A 89 SEAFKSGRYVTVQGISGTGSLRVGANFLQRFFKFSRDVYLPKPSWGNHTPIFRDAGLQLQAYRYYDPKTCSLDFTGAMED 168 (401)
T ss_dssp CHHHHTTCEEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEEESCCTTHHHHHHHTTCEEEEEECEETTTTEECHHHHHHH
T ss_pred ccccccCceEEEecCcchHHHHHHHHHHHHhccCCCEEEEcCCCchhHHHHHHHcCCeeEeeeeeccccCccCHHHHHHH
Confidence 76677999987 9999999998887765 899999999999999999999999999999986555678999976665
Q ss_pred cC---CCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCC--ccccccc-CCCCCeEEEccC
Q 014936 170 AD---QNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKP--FVPMGVF-GSTVPILTLGSL 243 (415)
Q Consensus 170 ~~---~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~--~~~~~~~-~~~~~~i~~~s~ 243 (415)
++ ++++++++++||||||.+++.+++++|+++|+++|+++|+||+|..+.+++.. ..++..+ ...+++++++|+
T Consensus 169 l~~~~~~~~~v~i~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~ 248 (401)
T 7aat_A 169 ISKIPEKSIILLHACAHNPTGVDPRQEQWKELASVVKKRNLLAYFDMAYQGFASGDINRDAWALRHFIEQGIDVVLSQSY 248 (401)
T ss_dssp HTTSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTTTSCHHHHTHHHHHHHHTTCCCEEEEEC
T ss_pred HHhCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEccccccccCCCccccHHHHHHHHhcCCcEEEEecC
Confidence 54 56789999999999999999999999999999999999999999998876431 2222222 345678999999
Q ss_pred ccccCCCCceEEEEEeeCCCCCCChHH----HHHHHHhhc-cccCCchhHHHHHHHHhhCCCc-----HHHHHHHHHHHH
Q 014936 244 SKRWIVPGWRLGWFVTTDPCGMFRKPK----VVERMKKYF-DILGDPATFIQAAVPSILQQPD-----EVFFKKTLNLLK 313 (415)
Q Consensus 244 sK~~~~~G~r~G~~~~~~~~~~~~~~~----~~~~~~~~~-~~~~~~~~~~~~a~~~~l~~~~-----~~~~~~~~~~~~ 313 (415)
||.|+++|+|+||++++.. +++ +...++... ..+.+++...|.++..++.+.. .+++++.+++++
T Consensus 249 sK~~~~~G~RiG~l~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 323 (401)
T 7aat_A 249 AKNMGLYGERAGAFTVICR-----DAEEAKRVESQLKILIRPMYSNPPMNGARIASLILNTPELRKEWLVEVKGMADRII 323 (401)
T ss_dssp TTTSCCGGGCEEEEEEECS-----SHHHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH
T ss_pred CcccccccCceEEEEEEeC-----CHHHHHHHHHHHHHHHHhccCCCChHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999987421 123 334444432 2345566778888877776521 355778889999
Q ss_pred HHHHHHHHHhhcC---CCCcCCCCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEee-C
Q 014936 314 QSVDICYNKIKEI---PCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFA-V 389 (415)
Q Consensus 314 ~~~~~l~~~l~~~---~~~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~-~ 389 (415)
++++.+.+.|+++ +++. +..|.+++|+|+.++ .+++..+++++||.+.|+ +|++++ .
T Consensus 324 ~~r~~l~~~L~~~~~~~~~~-~~~~~~~~~~~~~~~----------~~~~~~ll~~~gi~v~~~--------~Ris~~~~ 384 (401)
T 7aat_A 324 SMRTQLVSNLKKEGSSHNWQ-HITDQIGMFCFTGLK----------PEQVERLTKEFSIYMTKD--------GRISVAGV 384 (401)
T ss_dssp HHHHHHHHHHHHTTCCSCCH-HHHHCCSSEEECCCC----------HHHHHHHHHHHCEECCTT--------CEEEGGGC
T ss_pred HHHHHHHHHHHhcCCCCCCc-eecCCcceEEecCCC----------HHHHHHHHHhCCEeccCC--------CeEEeccC
Confidence 9999999999886 2355 446889999997653 345577778889999765 599995 6
Q ss_pred ChhhHHHHHHHHHHHH
Q 014936 390 DPYSLEECLDRIKSFY 405 (415)
Q Consensus 390 ~~~~l~~~l~~l~~~~ 405 (415)
++++++.+++.|++++
T Consensus 385 ~~~~i~~~~~~l~~~~ 400 (401)
T 7aat_A 385 ASSNVGYLAHAIHQVT 400 (401)
T ss_dssp CTTTHHHHHHHHHHHH
T ss_pred ChhhHHHHHHHHHHHh
Confidence 7777999999998765
No 55
>3fsl_A Aromatic-amino-acid aminotransferase; tyrosine aminotransferase, pyridoxal phosphate, internal ALD schiff base, amino-acid biosynthesis; HET: PLR; 2.35A {Escherichia coli k-12} SCOP: c.67.1.1 PDB: 3tat_A*
Probab=100.00 E-value=1.8e-44 Score=342.26 Aligned_cols=358 Identities=15% Similarity=0.135 Sum_probs=282.8
Q ss_pred hHHHHHHHhhhcccccccCcceeEeccc---CCCCCCCCCCcHHHHHHHHH-HHhcCCCCCCCCCCCcHHHHHHHHHHHh
Q 014936 16 TIKGMLSLLMQSVDDEKNEKKVISLAMG---DPTVHSCFHTTHVATEAVAE-ALLSEKFNGYAPTAGLPLTRRAIAEYLS 91 (415)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~i~l~~g---~~~~~~~~~~~~~~~~a~~~-~~~~~~~~~y~~~~g~~~lr~~ia~~~~ 91 (415)
.+..+...+..+. .++++||+.| +|. ...++++.+++++.+ .+.......|++..|..++|+++++++.
T Consensus 12 ~~~~~~~~~~~~~-----~~~~i~l~~g~y~d~~--~~~~~~~~v~~a~~~~~~~~~~~~~y~~~~g~~~lr~~la~~~~ 84 (397)
T 3fsl_A 12 PILTLMERFKEDP-----RSDKVNLSIGLYYNED--GIIPQLQAVAEAEARLNAQPHGASLYLPMEGLNCYRHAIAPLLF 84 (397)
T ss_dssp HHHHHHHHHHTCC-----CSCCEECSSCCCCCTT--SCCCCCHHHHHHHHHHHHSCCCCCCCCCTTCCHHHHHHHHHHHH
T ss_pred chhhHHHHHhcCC-----CCCeEEEeeeEEECCC--CCccCcHHHHHHHHhhccCccccccCCCCCchHHHHHHHHHHHh
Confidence 4555555444333 4678999999 443 224556999999999 8876455689988899999999999997
Q ss_pred hhCCCCCCCC--cEEEeCChHHHHHHHH--HHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHH
Q 014936 92 RDLPYKLTPN--DVFVTSGCTQAIDVAM--ALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIE 167 (415)
Q Consensus 92 ~~~~~~~~~~--~i~i~~g~~~al~~~~--~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~ 167 (415)
...+..++++ +|++|+|+++++..++ .++.++||+|+++.|+|..+...++..|.++..+++.+++++.+|+++++
T Consensus 85 ~~~~~~~~~~~~~i~~t~g~~~a~~~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~ 164 (397)
T 3fsl_A 85 GADHPVLKQQRVATIQTLGGSGALKVGADFLKRYFPESGVWVSDPTWENHVAIFAGAGFEVSTYPWYDEATNGVRFNDLL 164 (397)
T ss_dssp CTTCHHHHTTCEEEEEESHHHHHHHHHHHHHHHHCTTCCEEEESSCCHHHHHHHHHTTCCEEEECCEETTTTEECHHHHH
T ss_pred cCCcccccccceEEEEcCCcHHHHHHHHHHHHhcCCCCeEEEeCCCchhHHHHHHHcCCceEEEeeeeccCCcCcHHHHH
Confidence 5444334688 9999999999999995 45568999999999999999999999999999998854556789999999
Q ss_pred hhcC---CCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCC-Cccccccc-CCCCCeEEEcc
Q 014936 168 SLAD---QNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDK-PFVPMGVF-GSTVPILTLGS 242 (415)
Q Consensus 168 ~~~~---~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~-~~~~~~~~-~~~~~~i~~~s 242 (415)
+.++ ++++++++++|+||||.+++.+++++|+++|+++|+++|+||+|+++.+++. ...++..+ +..+++++++|
T Consensus 165 ~~l~~~~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S 244 (397)
T 3fsl_A 165 ATLKTLQAGSIVLLHPCCHNPTGADLTNDQWDAVIEILKARELIPFLDIAYQGFGAGMEEDAYAIRAIASAGLPALVSNS 244 (397)
T ss_dssp HHHTTCCTTCEEEECSSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTSSSCTTGGGHHHHHHHHTTCCEEEEEE
T ss_pred HHHHhCCCCCEEEEeCCCCCCCCcCCCHHHHHHHHHHHHhCCEEEEEecCchhhccCcccccHHHHHHHhcCCCEEEEec
Confidence 9987 5678889999999999999999999999999999999999999999887632 22333333 34568999999
Q ss_pred CccccCCCCceEEEEEeeCCCCCCChHHHHHHHHh----h-ccccCCchhHHHHHHHHhhCCCc-----HHHHHHHHHHH
Q 014936 243 LSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKK----Y-FDILGDPATFIQAAVPSILQQPD-----EVFFKKTLNLL 312 (415)
Q Consensus 243 ~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~----~-~~~~~~~~~~~~~a~~~~l~~~~-----~~~~~~~~~~~ 312 (415)
+||.|+++|+|+||++++.. ++++++.+.. . ...+..++.+++.++..++.... .+++++.++++
T Consensus 245 ~SK~~~~~G~riG~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~ 319 (397)
T 3fsl_A 245 FSKIFSLYGERVGGLSVMCE-----DAEAAGRVLGQLKATVRRNYSSPPNFGAQVVAAVLNDEALKASWLKEVEEMRTRI 319 (397)
T ss_dssp CTTTTTCGGGCCEEEEEECS-----SHHHHHHHHHHHHHHHHTTTSSCCSHHHHHHHHHHTSHHHHHHHHHHHHHHHHHH
T ss_pred ccccccCcCCCeeEEEEecC-----CHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHH
Confidence 99999999999999986321 1234443322 1 12234567888988888887532 46678889999
Q ss_pred HHHHHHHHHHhhcCC---CCcCCCCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEeeC
Q 014936 313 KQSVDICYNKIKEIP---CISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFAV 389 (415)
Q Consensus 313 ~~~~~~l~~~l~~~~---~~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~ 389 (415)
+++++.+.+.|++++ ++. +..|.+|+|+|++++ . +.+..+++++||.+.||. ||+++.
T Consensus 320 ~~~~~~l~~~L~~~~~~~~~~-~~~~~~~~~~~~~~~---------~-~~~~~~l~~~gi~v~~g~--------Ris~~~ 380 (397)
T 3fsl_A 320 LAMRQELVKVLSTEMPERNFD-YLLNQRGMFSYTGLS---------A-AQVDRLREEFGVYLIASG--------RMCVAG 380 (397)
T ss_dssp HHHHHHHHHHHHHHCTTSCCT-HHHHCCSSEEECCCC---------H-HHHHHHHHTTCEECCTTC--------EEEGGG
T ss_pred HHHHHHHHHHHHhcCCCCCce-eecCCceEEEecCCC---------H-HHHHHHHHhCCEEECCCC--------eEEEEe
Confidence 999999999999864 566 446888999997763 2 345667788899999874 999965
Q ss_pred -ChhhHHHHHHHHHHH
Q 014936 390 -DPYSLEECLDRIKSF 404 (415)
Q Consensus 390 -~~~~l~~~l~~l~~~ 404 (415)
+++++++++++|+++
T Consensus 381 ~~~~~i~~~~~~l~~~ 396 (397)
T 3fsl_A 381 LNTANVQRVAKAFAAV 396 (397)
T ss_dssp CCTTTHHHHHHHHHHH
T ss_pred cCHhhHHHHHHHHHhh
Confidence 888999999999875
No 56
>3g7q_A Valine-pyruvate aminotransferase; NP_462565.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.80A {Salmonella typhimurium}
Probab=100.00 E-value=9.3e-45 Score=346.55 Aligned_cols=383 Identities=21% Similarity=0.252 Sum_probs=275.8
Q ss_pred CccccCCccCCcchhhHHHHHHHhhhcccccccCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCC----CCCCCCC
Q 014936 1 MEISNGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEK----FNGYAPT 76 (415)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~----~~~y~~~ 76 (415)
|.+|..+...... ..+...+.++.+.. .++++++|+.|.|... ..+.+.+.+++.+.+.+.. ...|+++
T Consensus 2 m~~s~~~~~~~~~-~~~~~~~~~~~~~~----~~~~~i~l~~g~p~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~ 74 (417)
T 3g7q_A 2 MTFSLFGDKFTRH-SGITRLMEDLNDGL----RTPGAIMLGGGNPAHI--PAMQDYFQTLLTDMVESGKAADALCNYDGP 74 (417)
T ss_dssp ---------------CHHHHHHHHHC---------CCEECSCCCCCCC--HHHHHHHHHHHHHHHHHTHHHHHHHSTTCT
T ss_pred Cchhhhhhhhhcc-ccHHHHHHHHHhhc----cCCCceEecCcCCCCC--ChHHHHHHHHHHHHhhCCcccceeeccCCC
Confidence 6677777766543 34555555454433 3578999999987631 1123667777777665431 2379988
Q ss_pred CCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCC-----EEEEc-CCCCcchHHHHHhC------
Q 014936 77 AGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGA-----NILLP-RPGFPIYELSAAFR------ 144 (415)
Q Consensus 77 ~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd-----~vi~~-~p~y~~~~~~~~~~------ 144 (415)
.|.+++|+++|+++.+.+|.++++++|++|+|++++++++++++.++|| +|+++ .|+|+.+...+...
T Consensus 75 ~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~t~al~~~~~~l~~~gd~~~~~~vi~~~~p~~~~~~~~~~~~~~~~~~ 154 (417)
T 3g7q_A 75 QGKTALLNALAVLLRETLGWDIEPQNIALTNGSQSAFFYLFNLFAGRRADGSTKKVLFPLAPEYIGYADSGLEDDLFVSA 154 (417)
T ss_dssp TSHHHHHHHHHHHHHHHHCCCCCGGGEEEESCHHHHHHHHHHHHSBC----CCBEEEESSCCCHHHHHC-----CCEEEC
T ss_pred CCcHHHHHHHHHHHHHHhCCCCCcccEEEeCCcHHHHHHHHHHHcCCCccCCcceEEEeCCCccccchhhccchhhhccc
Confidence 9999999999999998888889999999999999999999999999987 89997 99999887765322
Q ss_pred CCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCC
Q 014936 145 HIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKP 224 (415)
Q Consensus 145 g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~ 224 (415)
+..+..++.+ ..++.+|++.++ ++++++++++++|+||||.+++.+++++|+++|++||+++|+||+|+.+... ..
T Consensus 155 ~~~~~~~~~~-~~~~~~d~~~l~--~~~~~~~v~~~~p~NptG~~~~~~~~~~l~~~a~~~~~~li~De~~~~~~~~-~~ 230 (417)
T 3g7q_A 155 RPNIELLPEG-QFKYHVDFEHLH--IGEETGMICVSRPTNPTGNVITDEELMKLDRLANQHNIPLVIDNAYGVPFPG-II 230 (417)
T ss_dssp CCEEEEEGGG-EEEEECCGGGCC--CCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCCEEEECTTCTTTTC-CB
T ss_pred cCcccccCCc-ccccccCHHHhc--cccCceEEEECCCCCCCCCccCHHHHHHHHHHHHHcCCEEEEeCCCcccccc-cc
Confidence 2333333321 114568999888 6778999999999999999999999999999999999999999999863211 11
Q ss_pred cccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhhc-cccCCchhHHHHHHHHhhCCCc-H
Q 014936 225 FVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYF-DILGDPATFIQAAVPSILQQPD-E 302 (415)
Q Consensus 225 ~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~a~~~~l~~~~-~ 302 (415)
..... ....++++++.|+|| ++++|+|+||+++++ ++++.+.... ..+.+++++.+.++..+++... .
T Consensus 231 ~~~~~-~~~~~~~i~~~s~sK-~~~~G~r~G~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 300 (417)
T 3g7q_A 231 FSEAR-PLWNPNIILCMSLSK-LGLPGSRCGIIIAND--------KTITAIANMNGIISLAPGGMGPAMMCEMIKRNDLL 300 (417)
T ss_dssp CSCCC-CCCCTTEEEEEESGG-GTCTTSCCEEEECCH--------HHHHHHHHHHHHHCCCCCSHHHHHHHHHHHTTCHH
T ss_pred ccccc-cCCCCCEEEEEechh-ccCCCcceEEEEeCH--------HHHHHHHHhhcceeeCCCcHHHHHHHHHHcCcchH
Confidence 11111 122457899999999 599999999999864 6888877663 3345678899999999988654 2
Q ss_pred HHHHH-HHHHHHHHHHHHHHHhhc-CCC--CcCCCCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCC
Q 014936 303 VFFKK-TLNLLKQSVDICYNKIKE-IPC--ISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVG 378 (415)
Q Consensus 303 ~~~~~-~~~~~~~~~~~l~~~l~~-~~~--~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~ 378 (415)
.+..+ .+++++++++.+.+.|++ +++ +. +..|.+|+++|++++... .+..++...+ .++||.+.||..|+
T Consensus 301 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~-~~~~~~g~~~~~~~~~~~----~~~~~l~~~l-~~~gi~v~~g~~f~ 374 (417)
T 3g7q_A 301 RLSETVIKPFYYQRVQQTIAIIRRYLSEERCL-IHKPEGAIFLWLWFKDLP----ITTELLYQRL-KARGVLMVPGHYFF 374 (417)
T ss_dssp HHHHHTHHHHHHHHHHHHHHHHHHHCCTTTCE-EECCCBSSEEEEECTTCS----SCHHHHHHHH-HHTTEECEEGGGGC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcccCCce-eeCCCcceEEEEEcCCCC----CCHHHHHHHH-HHCCEEEECchhhC
Confidence 33344 667888888888888876 554 55 447889999999987421 2566776666 67799999999886
Q ss_pred C---------CCeEEEEeeCChhhHHHHHHHHHHHHHHHHH
Q 014936 379 L---------KNWLRVTFAVDPYSLEECLDRIKSFYQRHAK 410 (415)
Q Consensus 379 ~---------~~~iRi~~~~~~~~l~~~l~~l~~~~~~~~~ 410 (415)
. ++++||+++.+++++++++++|++++++..+
T Consensus 375 ~~~~~~~~~~~~~iRis~~~~~~~i~~~~~~l~~~l~~~~~ 415 (417)
T 3g7q_A 375 PGLDKPWPHTHQCMRMNYVPEPDKIEAGVKILAEEIERAWR 415 (417)
T ss_dssp TTBSSCCGGGGGEEEEESCSCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCccccccCCCeEEEEecCCHHHHHHHHHHHHHHHHHHHh
Confidence 4 4699999988999999999999999988765
No 57
>3d6k_A Putative aminotransferase; APC82464, corynebacterium diphthe structural genomics, PSI-2, protein structure initiative; 2.00A {Corynebacterium diphtheriae}
Probab=100.00 E-value=3.3e-45 Score=349.91 Aligned_cols=348 Identities=16% Similarity=0.152 Sum_probs=275.3
Q ss_pred ceeEecccCCCCCCCCCCcHHHHHHHHHHH--hcC-CCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHH
Q 014936 36 KVISLAMGDPTVHSCFHTTHVATEAVAEAL--LSE-KFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQA 112 (415)
Q Consensus 36 ~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~--~~~-~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~a 112 (415)
.+++|+.|.|+.. .+++++.+++++.+.+ ... ....|+++.|.++||+++|+|+ ++++++|++|+|++++
T Consensus 33 ~~i~l~~g~~~~~-~~~~~~~~~~a~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~------~~~~~~i~~t~G~~~a 105 (422)
T 3d6k_A 33 LSLDLTRGKPSAE-QLDLSNDLLSLPGGDFRTKDGVDCRNYGGLLGIADIRELWAEAL------GLPADLVVAQDGSSLN 105 (422)
T ss_dssp CCEECCCCSCCHH-HHHTTGGGGGCSTTCCBCTTCCBTTSSCCSSCCHHHHHHHHHHH------TCCGGGEEECSSCHHH
T ss_pred CeEeCCCCCCChh-hCCCcHHHHHHHHHHHhhccchhhhCCCCCCCCHHHHHHHHHHh------CCChhHEEEecchHHH
Confidence 4799999997421 1455667777776553 122 3568999999999999999999 5788999999999999
Q ss_pred H--HHHHHHhcCC------------CCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCC-CceEE
Q 014936 113 I--DVAMALLSRP------------GANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ-NTVAL 177 (415)
Q Consensus 113 l--~~~~~~l~~~------------gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~v 177 (415)
+ .+++.++.++ +|+|+++.|+|+.+...++..|.+++.++.+.+ ++|++.+++.+++ +++++
T Consensus 106 l~l~~~~~~l~~~~~~g~~~~~~~d~~~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~---g~d~~~l~~~l~~~~~~~v 182 (422)
T 3d6k_A 106 IMFDLISWSYTWGNNDSSRPWSAEEKVKWLCPVPGYDRHFTITEHFGFEMINVPMTDE---GPDMGVVRELVKDPQVKGM 182 (422)
T ss_dssp HHHHHHHHHHHHCCTTCSSCGGGSSCCEEEEEESCCHHHHHHHHHHTCEEEEEEEETT---EECHHHHHHHHTSTTEEEE
T ss_pred HHHHHHHHHhcCcccccccccccCCCCEEEEeCCccHHHHHHHHHcCCEEEecCCCCC---CCCHHHHHHHHhcCCCeEE
Confidence 7 6777777655 458999999999999999999999999998642 3899999999875 67887
Q ss_pred E-ecCCCCccccCCCHHHHHHHHHHHh-hcCcEEEEccccCC--cccCCCCcccccc----cCCCCCeEEEccCccccCC
Q 014936 178 V-IINPGNPCGNVYSYQHLQKLAETAN-KLKTLVIADEVYGH--LVFGDKPFVPMGV----FGSTVPILTLGSLSKRWIV 249 (415)
Q Consensus 178 ~-i~~p~nptG~~~~~~~l~~i~~~~~-~~~~~li~De~~~~--~~~~~~~~~~~~~----~~~~~~~i~~~s~sK~~~~ 249 (415)
+ +++||||||.++|.+++++|+++|+ ++|+++|+||+|.. +..++....++.. .+..+++++++||||. ++
T Consensus 183 ~~~~~~~NPtG~~~~~~~l~~l~~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~-~~ 261 (422)
T 3d6k_A 183 WTVPVFGNPTGVTFSEQTCRELAEMSTAAPDFRIVWDNAYALHTLSDEFPIVHNVIEFAQAAGNPNRFWFMSSTSKI-TH 261 (422)
T ss_dssp EECCSSCTTTCCCCCHHHHHHHHHCCCSSTTCEEEEECTTTTCBSSSCCCCCCCHHHHHHHTTCTTCEEEEEESTTT-SC
T ss_pred EEcCCCCCCCCCCCCHHHHHHHHHHHhhccCCEEEEECCccccccCCCCCCCcChhhHhhccCCCCcEEEEcChhhh-cC
Confidence 7 7899999999999999999999999 99999999999986 3333323334422 2345689999999998 89
Q ss_pred CCceEEEEEeeCCCCCCChHHHHHHHHhhc-cccCCchhHHHHHHHHhhCCCc--HHHHHHHHHHHHHHHHHHHHHhhc-
Q 014936 250 PGWRLGWFVTTDPCGMFRKPKVVERMKKYF-DILGDPATFIQAAVPSILQQPD--EVFFKKTLNLLKQSVDICYNKIKE- 325 (415)
Q Consensus 250 ~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~a~~~~l~~~~--~~~~~~~~~~~~~~~~~l~~~l~~- 325 (415)
+|+|+||+++++ ++++.+.... ..++++++++|.++..+|+... ++++++.++.++++++.+.+.|.+
T Consensus 262 ~GlriG~~~~~~--------~l~~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 333 (422)
T 3d6k_A 262 AGSGVSFFASSK--------ENIEWYASHANVRGIGPNKLNQLAHAQFFGDVAGLKAHMLKHAASLAPKFERVLEILDSR 333 (422)
T ss_dssp TTSSCEEEECCH--------HHHHHHHHHHHHHCSCCCHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccceEEEEeCH--------HHHHHHHHHHHhhcCCCCHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999864 6778777663 3346789999999999998621 367788888888899888888864
Q ss_pred ---CCCCcCCCCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEc-CCCCC-----CCCeEEEEee-CChhhHH
Q 014936 326 ---IPCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILP-GTAVG-----LKNWLRVTFA-VDPYSLE 395 (415)
Q Consensus 326 ---~~~~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~-g~~~~-----~~~~iRi~~~-~~~~~l~ 395 (415)
++++. +..|.+|+|+|++++.. +...+ ..++.++||.+.| |..|. ..+++||+++ .++++++
T Consensus 334 l~~~~~~~-~~~p~~g~~~~~~~~~~------~~~~~-~~~l~~~gV~v~~~g~~f~~~~~~~~~~iRis~~~~~~e~i~ 405 (422)
T 3d6k_A 334 LSEYGVAK-WTSPTGGYFISVDVVPG------TASRV-VELAKEAGIALTGAGSSFPLHNDPNNENIRLAPSLPPVAELE 405 (422)
T ss_dssp HGGGTCEE-ECCCSBSSCEEEEESTT------CHHHH-HHHHHHTTEECCCTTTTSGGGCCTTSCEEEECCSSSCHHHHH
T ss_pred cCcCCceE-EeCCCcceEEEEECCCC------CHHHH-HHHHHHCCeEEEcCccccCCCCCCCCCeEEEecCCCCHHHHH
Confidence 33355 34788999999998641 34444 5566788999999 55563 2589999998 6999999
Q ss_pred HHHHHHHHHHHHHHH
Q 014936 396 ECLDRIKSFYQRHAK 410 (415)
Q Consensus 396 ~~l~~l~~~~~~~~~ 410 (415)
+++++|++++++...
T Consensus 406 ~~~~~l~~~l~~~~~ 420 (422)
T 3d6k_A 406 VAMDGFATCVLMAAL 420 (422)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHh
Confidence 999999999887654
No 58
>1fg7_A Histidinol phosphate aminotransferase; HISC, histidine biosynthesis, pyridoxal PH montreal-kingston bacterial structural genomics initiative; HET: PMP; 1.50A {Escherichia coli} SCOP: c.67.1.1 PDB: 1fg3_A* 1gew_A* 1gex_A* 1gey_A* 1iji_A*
Probab=100.00 E-value=9e-44 Score=332.30 Aligned_cols=322 Identities=20% Similarity=0.331 Sum_probs=265.8
Q ss_pred cceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHH
Q 014936 35 KKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAID 114 (415)
Q Consensus 35 ~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~ 114 (415)
+.+++|+.|.+. +++++.+ .+ .....|+++ +..++|+++|+++ ++++++|++|+|+++++.
T Consensus 29 ~~~i~l~~~~~~----~~~~~~v------a~--~~~~~Y~~~-~~~~lr~~la~~~------~~~~~~v~~~~G~~~ai~ 89 (356)
T 1fg7_A 29 NGDVWLNANEYP----TAVEFQL------TQ--QTLNRYPEC-QPKAVIENYAQYA------GVKPEQVLVSRGADEGIE 89 (356)
T ss_dssp TCSEECSSCCCS----SCCCCCC------CC--CCTTSCCCS-SCHHHHHHHHHHH------TSCGGGEEEESHHHHHHH
T ss_pred CceEEeeCCCCC----CCCCHhH------hh--hhhccCCCc-cHHHHHHHHHHHh------CCChHHEEEcCCHHHHHH
Confidence 468999999864 4445544 12 245689885 5899999999999 567899999999999999
Q ss_pred HHHHHhcCCC-CEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHH
Q 014936 115 VAMALLSRPG-ANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQ 193 (415)
Q Consensus 115 ~~~~~l~~~g-d~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~ 193 (415)
.+++++.++| |+|+++.|+|+.+...++..|.++..++.+ .++.+|++++++.++ +++++++++|+||||.++|.+
T Consensus 90 ~~~~~~~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~-~~~~v~l~~p~nptG~~~~~~ 166 (356)
T 1fg7_A 90 LLIRAFCEPGKDAILYCPPTYGMYSVSAETIGVECRTVPTL--DNWQLDLQGISDKLD-GVKVVYVCSPNNPTGQLINPQ 166 (356)
T ss_dssp HHHHHHCCTTTCEEEECSSSCTHHHHHHHHHTCEEEECCCC--TTSCCCHHHHHTSCT-TEEEEEEESSCTTTCCCCCHH
T ss_pred HHHHHHhCCCCCEEEEeCCChHHHHHHHHHcCCEEEEeeCC--CCCCCCHHHHHHHhc-CCCEEEEeCCCCCCCCCCCHH
Confidence 9999999999 999999999999999999999999988875 356789999999888 889999999999999999999
Q ss_pred HHHHHHHHHhhcCcEEEEccccCCcccCCCCccccccc-CCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHH
Q 014936 194 HLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVF-GSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVV 272 (415)
Q Consensus 194 ~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~-~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~ 272 (415)
++++|+++|+ +|+++|+||+|.++.. + .++..+ +..++++++.|+||.|+++|+|+||+++++ +++
T Consensus 167 ~l~~l~~~~~-~~~~li~De~~~~~~~-~---~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~--------~~~ 233 (356)
T 1fg7_A 167 DFRTLLELTR-GKAIVVADEAYIEFCP-Q---ASLAGWLAEYPHLAILRTLSKAFALAGLRCGFTLANE--------EVI 233 (356)
T ss_dssp HHHHHHHHHT-TTCEEEEECTTGGGSG-G---GCSGGGTTTCTTEEEEEESSSTTCCGGGCCEEEEECH--------HHH
T ss_pred HHHHHHHhCC-CCCEEEEEccchhhcC-C---CcHHHHHhhCCCEEEEecchHhhcCchhhhEEEEeCH--------HHH
Confidence 9999999999 9999999999998652 1 222222 334678999999999999999999999854 678
Q ss_pred HHHHhhccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCccccCC
Q 014936 273 ERMKKYFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLDD 352 (415)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~~~ 352 (415)
+.+..... .++++++.|.++.++|++...+++++.+++++++++++.+.|++++++. ...|.+|+|+|++++
T Consensus 234 ~~l~~~~~-~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~-~~~~~~~~~~~~~~~------ 305 (356)
T 1fg7_A 234 NLLMKVIA-PYPLSTPVADIAAQALSPQGIVAMRERVAQIIAEREYLIAALKEIPCVE-QVFDSETNYILARFK------ 305 (356)
T ss_dssp HHHHHHSC-SSCSCHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTEE-EECCCSSSEEEEEET------
T ss_pred HHHHHhcC-CCCCCHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHHHHHHhCCCce-EECCCCCeEEEEECC------
Confidence 88776644 3478889999999999752223388899999999999999999886543 225778899999885
Q ss_pred CCCHHHHHHHHHhhcCeEEEc-CCCCCCCCeEEEEeeCChhhHHHHHHHHHH
Q 014936 353 IIDDIDFCFKLAKEESVIILP-GTAVGLKNWLRVTFAVDPYSLEECLDRIKS 403 (415)
Q Consensus 353 ~~~~~~~~~~ll~~~gi~v~~-g~~~~~~~~iRi~~~~~~~~l~~~l~~l~~ 403 (415)
+..++...+ .++||.+.| |..|+.++++||+++ +++++++++++|++
T Consensus 306 --~~~~l~~~L-~~~gI~v~~~g~~~~~~~~iRis~~-~~~e~~~~~~~l~~ 353 (356)
T 1fg7_A 306 --ASSAVFKSL-WDQGIILRDQNKQPSLSGCLRITVG-TREESQRVIDALRA 353 (356)
T ss_dssp --THHHHHHHH-HHTTEECEECTTSTTCTTEEEEECC-CHHHHHHHHHHHHT
T ss_pred --CHHHHHHHH-HHCCEEEEECCCCCCCCCeEEEEeC-CHHHHHHHHHHHHh
Confidence 356677766 678999999 888887789999997 47889999988865
No 59
>3op7_A Aminotransferase class I and II; PLP-dependent transferase, structural genomics, joint center structural genomics, JCSG; HET: LLP UNL; 1.70A {Streptococcus suis 89} PDB: 3p6k_A*
Probab=100.00 E-value=3.1e-44 Score=338.09 Aligned_cols=325 Identities=22% Similarity=0.391 Sum_probs=277.0
Q ss_pred HHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHH
Q 014936 60 AVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYEL 139 (415)
Q Consensus 60 a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~ 139 (415)
++.+.+.... ..|++..|..++|+++++++. +++++++++|+|+++++.+++.++.++||+|+++.|+|+++..
T Consensus 47 ~~~~~~~~~~-~~y~~~~g~~~l~~~la~~~~-----~~~~~~v~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~ 120 (375)
T 3op7_A 47 DFYKKLQGTK-LNYGWIEGSPAFKKSVSQLYT-----GVKPEQILQTNGATGANLLVLYSLIEPGDHVISLYPTYQQLYD 120 (375)
T ss_dssp HHHHHHHTSC-CSSCCTTCCHHHHHHHHTTSS-----SCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESSCTHHHH
T ss_pred HHHHHHhcCC-cCCCCCCChHHHHHHHHHHhc-----cCChhhEEEcCChHHHHHHHHHHhcCCCCEEEEeCCCchhHHH
Confidence 4445555444 478888899999999999873 4678999999999999999999999999999999999999999
Q ss_pred HHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcc
Q 014936 140 SAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLV 219 (415)
Q Consensus 140 ~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~ 219 (415)
.++..|.+++.+++++++++.+|+++++++++++++++++++|+||||.++|.+++++|+++|++||+++|+||+|+.+.
T Consensus 121 ~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~nptG~~~~~~~l~~i~~la~~~~~~li~De~~~~~~ 200 (375)
T 3op7_A 121 IPKSLGAEVDLWQIEEENGWLPDLEKLRQLIRPTTKMICINNANNPTGAVMDRTYLEELVEIASEVGAYILSDEVYRSFS 200 (375)
T ss_dssp HHHHTTCEEEEEEEEGGGTTEECHHHHHHHCCTTCCEEEEESSCTTTCCCCCHHHHHHHHHHHHTTTCEEEEECCSCCCS
T ss_pred HHHHcCCEEEEEeccccCCCCCCHHHHHHhhccCCeEEEEcCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEccccccc
Confidence 99999999999998766678889999999999899999999999999999999999999999999999999999999987
Q ss_pred cCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhhcc-ccCCchhHHHHHHHHhhC
Q 014936 220 FGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFD-ILGDPATFIQAAVPSILQ 298 (415)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~a~~~~l~ 298 (415)
+. +...+.. ..+++++++||||.++++|+|+||+++++ ++++.++.... .+.+++++.+.++..+++
T Consensus 201 ~~--~~~~~~~--~~~~~i~~~s~sK~~~~~G~r~G~v~~~~--------~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 268 (375)
T 3op7_A 201 EL--DVPSIIE--VYDKGIAVNSLSKTYSLPGIRIGWVAANH--------QVTDILRDYRDYTMICAGVFDDLVAQLALA 268 (375)
T ss_dssp SS--CCCCHHH--HCTTEEEEEESSSSSSCGGGCCEEEECCH--------HHHHHHTTTGGGTTSCCCHHHHHHHHHHHH
T ss_pred cc--CCCchhh--hcCCEEEEeEChhhcCCcccceEEEEeCH--------HHHHHHHHHHhhhccCCCcHHHHHHHHHHh
Confidence 65 2222222 24567999999999988999999999854 68888877643 345668888888888887
Q ss_pred CCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCC
Q 014936 299 QPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVG 378 (415)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~ 378 (415)
. .+.++++.++.++++++.+.+.|++.+++. +..|.++++.|+.++.. .+..+++..+++++||.+.||..|+
T Consensus 269 ~-~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~-~~~~~~~~~~~~~~~~~-----~~~~~~~~~ll~~~gi~v~~g~~~~ 341 (375)
T 3op7_A 269 H-YQEILERNRHILEENLAILDQWIEEEPLVS-YIRPAVVSTSFVKIAVD-----MPMEDFCLQLLQEHGVLLVPGNRFE 341 (375)
T ss_dssp T-HHHHHHHHHHHHHHHHHHHHHHHHHCTTEE-ECCCSSSSCEEEEECCS-----SCHHHHHHHHHHHHCEECEEGGGGT
T ss_pred c-cHHHHHHHHHHHHHHHHHHHHHHhhCCCce-EecCCCeEEEeEEcCCC-----CCHHHHHHHHHHhCCEEEeChhhhC
Confidence 4 356788888999999999999999888887 44788888888887642 2567888888788899999999998
Q ss_pred CCCeEEEEeeCChhhHHHHHHHHHHHHHHHH
Q 014936 379 LKNWLRVTFAVDPYSLEECLDRIKSFYQRHA 409 (415)
Q Consensus 379 ~~~~iRi~~~~~~~~l~~~l~~l~~~~~~~~ 409 (415)
.++++|++++.+++++++++++|.++++++.
T Consensus 342 ~~~~iRi~~~~~~~~i~~~l~~l~~~l~~~~ 372 (375)
T 3op7_A 342 RDGYVRLGFACEQETLIKGLEKLSQFLRRFD 372 (375)
T ss_dssp CTTEEEECCCSCHHHHHHHHHHHHHHHGGGC
T ss_pred CCCeEEEEecCCHHHHHHHHHHHHHHHHHHh
Confidence 8899999998888999999999999987653
No 60
>3ppl_A Aspartate aminotransferase; dimer, PLP-dependent transferase-like fold structural genomics, joint center for structural genomics; HET: MSE PLP UNL; 1.25A {Corynebacterium glutamicum}
Probab=100.00 E-value=1.4e-44 Score=346.29 Aligned_cols=351 Identities=16% Similarity=0.152 Sum_probs=280.4
Q ss_pred cCcceeEecccCCCCCCCCCCcHHHHHHH--HHHHhcC--CCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCC
Q 014936 33 NEKKVISLAMGDPTVHSCFHTTHVATEAV--AEALLSE--KFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSG 108 (415)
Q Consensus 33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~--~~~~~~~--~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g 108 (415)
.....+||+.|.|+... ++.++.+.+++ .+.+... ....|+++.|.++||++||+++ ++++++|++|+|
T Consensus 31 ~~~~~i~~~~G~p~~~~-~p~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~------~~~~~~i~~t~G 103 (427)
T 3ppl_A 31 SKNLKLDLTRGKPSSEQ-LDFADELLALPGKGDFKAADGTDVRNYGGLDGIVDIRQIWADLL------GVPVEQVLAGDA 103 (427)
T ss_dssp HTCCCEECCCCSCCHHH-HHTTGGGGGCSCTTCCBCTTSCBTTSSCCSSCCHHHHHHHHHHH------TSCGGGEEECSS
T ss_pred cCCceEecCCCCCChHH-CCCcHHHHHHhhhHHHhhccchhhcCCCCCCCcHHHHHHHHHHh------CCCcceEEEeCC
Confidence 35568999999976321 22334566665 4544432 3568999899999999999999 578899999999
Q ss_pred hHHHH--HHHHHHhcC--C----------CCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcC-CC
Q 014936 109 CTQAI--DVAMALLSR--P----------GANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLAD-QN 173 (415)
Q Consensus 109 ~~~al--~~~~~~l~~--~----------gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~-~~ 173 (415)
+++++ ++++.++.+ + ||+|++++|+|..+...++..|.+++.++++.+ ++|++.|+++++ ++
T Consensus 104 ~~~al~~~~~~~~l~~~~~g~~~~~~~~~gd~V~v~~p~y~~~~~~~~~~g~~~~~v~~~~~---g~d~~~l~~~l~~~~ 180 (427)
T 3ppl_A 104 SSLNIMFDVISWSYIFGNNDSVQPWSKEETVKWICPVPGYDRHFSITERFGFEMISVPMNED---GPDMDAVEELVKNPQ 180 (427)
T ss_dssp CHHHHHHHHHHHHHHHCCTTCSSCGGGSSCCEEEEEESCCHHHHHHHHHTTCEEEEEEEETT---EECHHHHHHHTTSTT
T ss_pred cHHHHHHHHHHHHHhccCCcccccccCCCCCEEEEcCCCcHHHHHHHHHcCCEEEEeCCCCC---CCCHHHHHHHHhcCC
Confidence 99999 588888876 6 899999999999999999999999999998643 489999999985 57
Q ss_pred ceEEEec-CCCCccccCCCHHHHHHHHHHH-hhcCcEEEEccccCCcccCCCCcc--ccccc----CCCCCeEEEccCcc
Q 014936 174 TVALVII-NPGNPCGNVYSYQHLQKLAETA-NKLKTLVIADEVYGHLVFGDKPFV--PMGVF----GSTVPILTLGSLSK 245 (415)
Q Consensus 174 ~~~v~i~-~p~nptG~~~~~~~l~~i~~~~-~~~~~~li~De~~~~~~~~~~~~~--~~~~~----~~~~~~i~~~s~sK 245 (415)
+++++++ +||||||.++|.+++++|+++| +++|+++|+||+|+.+.|.+.+.. ++..+ +..+++++++||||
T Consensus 181 ~~~v~~~p~~~NPtG~~~~~~~~~~l~~~a~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK 260 (427)
T 3ppl_A 181 VKGMWVVPVFSNPTGFTVTEDVAKRLSAMETAAPDFRVVWDNAYAVHTLTDEFPEVIDIVGLGEAAGNPNRFWAFTSTSK 260 (427)
T ss_dssp EEEEEECCSSCTTTCCCCCHHHHHHHHHCCCSSTTCEEEEECTTTTCBSSSCCCCCCCHHHHHHHTTCTTSEEEEEESTT
T ss_pred CeEEEECCCCCCCCCccCCHHHHHHHHHHHhhcCCCEEEEECCCcccccCCCCCCccchhhhhhccCCCCcEEEEechhh
Confidence 7877654 7899999999999999999999 999999999999999887765432 33332 24568999999999
Q ss_pred ccCCCCceEEEEEeeCCCCCCChHHHHHHHHhhc-cccCCchhHHHHHHHHhhCCCc--HHHHHHHHHHHHHHHHHHHHH
Q 014936 246 RWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYF-DILGDPATFIQAAVPSILQQPD--EVFFKKTLNLLKQSVDICYNK 322 (415)
Q Consensus 246 ~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~a~~~~l~~~~--~~~~~~~~~~~~~~~~~l~~~ 322 (415)
. +++|+|+||+++++ ++++.+.... ....+++++.|.++..+++... ..++++.++.++++++.+.+.
T Consensus 261 ~-~~~G~r~G~~~~~~--------~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~ 331 (427)
T 3ppl_A 261 I-TLAGAGVSFFLTSA--------ENRKWYTGHAGIRGIGPNKVNQLAHARYFGDAEGVRAVMRKHAASLAPKFNKVLEI 331 (427)
T ss_dssp T-SCTTSSCEEEECCH--------HHHHHHHHHHHHHCSCCCHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred c-cCcCccEEEEEcCH--------HHHHHHHHHhhcccCCCCHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 9 89999999999865 6777777663 3456788999999999998622 467788888888888888888
Q ss_pred hhc----CCCCcCCCCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEc-CCCCC-----CCCeEEEEeeC-Ch
Q 014936 323 IKE----IPCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILP-GTAVG-----LKNWLRVTFAV-DP 391 (415)
Q Consensus 323 l~~----~~~~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~-g~~~~-----~~~~iRi~~~~-~~ 391 (415)
|.+ ++++. +..|.+|+|+|++++.. +..++.. .+.++||.+.| |..|. .++++||+++. ++
T Consensus 332 L~~~l~~~~~~~-~~~p~~g~~~~~~~~~~------~~~~~~~-~l~~~gv~v~~~g~~~~~~~~~~~~~~Ris~~~~~~ 403 (427)
T 3ppl_A 332 LDSRLAEYGVAQ-WTVPAGGYFISLDVVPG------TASRVAE-LAKEAGIALTGAGSSYPLRQDPENKNLRLAPSLPPV 403 (427)
T ss_dssp HHHHHGGGTCCE-ECCCSBSSCEEEECSTT------CHHHHHH-HHHHTTEECCCTTTTSGGGCCTTSCEEEECCSSSCH
T ss_pred HHHhcCCCCceE-EeCCCccEEEEEECCcc------hHHHHHH-HHHHCCCEEecCcCcCCCCCCCCCCeEEEECCCCCH
Confidence 764 33455 44788999999999742 3555554 55778999999 55554 36899999975 78
Q ss_pred hhHHHHHHHHHHHHHHHHH
Q 014936 392 YSLEECLDRIKSFYQRHAK 410 (415)
Q Consensus 392 ~~l~~~l~~l~~~~~~~~~ 410 (415)
+++++++++|.+++++...
T Consensus 404 ~~i~~~~~~l~~~l~~~~~ 422 (427)
T 3ppl_A 404 EELEVAMDGVATCVLLAAA 422 (427)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 9999999999999987654
No 61
>1lc5_A COBD, L-threonine-O-3-phosphate decarboxylase; PLP-dependent decarboxylase cobalamin, lyase; 1.46A {Salmonella enterica} SCOP: c.67.1.1 PDB: 1lc7_A* 1lc8_A* 1lkc_A*
Probab=100.00 E-value=3e-43 Score=329.94 Aligned_cols=336 Identities=20% Similarity=0.299 Sum_probs=273.0
Q ss_pred cCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHH
Q 014936 33 NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQA 112 (415)
Q Consensus 33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~a 112 (415)
++++++||+.|.+. +++++.+++++.+.+.. ...|++ .+..++|+++++++ ++++++|++|+|++++
T Consensus 22 ~~~~~idl~~~~~~----~~~~~~v~~a~~~~~~~--~~~y~~-~~~~~l~~~la~~~------~~~~~~v~~~~g~~~a 88 (364)
T 1lc5_A 22 SPDQLLDFSANINP----LGMPVSVKRALIDNLDC--IERYPD-ADYFHLHQALARHH------QVPASWILAGNGETES 88 (364)
T ss_dssp CGGGSEECSSCCCT----TCCCHHHHHHHHHTGGG--GGSCCC-TTCHHHHHHHHHHH------TSCGGGEEEESSHHHH
T ss_pred CccceEEeccccCC----CCCCHHHHHHHHHHHHH--hhcCCC-CCHHHHHHHHHHHH------CcCHHHEEECCCHHHH
Confidence 35679999999853 55789999999988764 357876 47899999999999 4678899999999999
Q ss_pred HHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCH
Q 014936 113 IDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSY 192 (415)
Q Consensus 113 l~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~ 192 (415)
+.+++.++ +||+|+++.|+|+++...++..|.++..++.++++++.+ ++++.+.++++++++++++|+||||.++|.
T Consensus 89 l~~~~~~~--~gd~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~-l~~~~~~~~~~~~~v~i~~p~nptG~~~~~ 165 (364)
T 1lc5_A 89 IFTVASGL--KPRRAMIVTPGFAEYGRALAQSGCEIRRWSLREADGWQL-TDAILEALTPDLDCLFLCTPNNPTGLLPER 165 (364)
T ss_dssp HHHHHHHH--CCSEEEEEESCCTHHHHHHHHTTCEEEEEECCGGGTTCC-CTTHHHHCCTTCCEEEEESSCTTTCCCCCH
T ss_pred HHHHHHHc--CCCeEEEeCCCcHHHHHHHHHcCCeEEEEeCCcccccch-hHHHHHhccCCCCEEEEeCCCCCCCCCCCH
Confidence 99999999 679999999999999999999999999998865334433 576666676778889999999999999999
Q ss_pred HHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEE-eeCCCCCCChHHH
Q 014936 193 QHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFV-TTDPCGMFRKPKV 271 (415)
Q Consensus 193 ~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~-~~~~~~~~~~~~~ 271 (415)
+++++|+++|+++|+++|+||+|+.+.+++... +...+..++++++.|+||.|+++|+|+||++ +++ ++
T Consensus 166 ~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~--~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~--------~~ 235 (364)
T 1lc5_A 166 PLLQAIADRCKSLNINLILDEAFIDFIPHETGF--IPALKDNPHIWVLRSLTKFYAIPGLRLGYLVNSDD--------AA 235 (364)
T ss_dssp HHHHHHHHHHHHHTCEEEEECTTGGGSTTCCCS--GGGCTTCTTEEEEEESTTTTTCTTTCCEEEECCCH--------HH
T ss_pred HHHHHHHHHhhhcCcEEEEECcChhhccCccch--hhHhccCCCEEEEEECchhhcCCccceEEEEECCH--------HH
Confidence 999999999999999999999999887653222 2223444578999999999988999999999 644 67
Q ss_pred HHHHHhhccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCccccC
Q 014936 272 VERMKKYFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLD 351 (415)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~~ 351 (415)
++.++.... +++.+++.+.++.++|+. .+++++.+++++++++.+.+.|+++|++. + .+..|+|+|++++.
T Consensus 236 ~~~l~~~~~-~~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~~~~~-~-~~~~g~~~~~~~~~---- 306 (364)
T 1lc5_A 236 MARMRRQQM-PWSVNALAALAGEVALQD--SAWQQATWHWLREEGARFYQALCQLPLLT-V-YPGRANYLLLRCER---- 306 (364)
T ss_dssp HHHHHHHSC-TTCSCHHHHHHHHHGGGC--HHHHHHHHHHHHHHHHHHHHHHHTSTTEE-E-CCCSSSEEEEEESC----
T ss_pred HHHHHHhCC-CCCCCHHHHHHHHHHHhC--cHHHHHHHHHHHHHHHHHHHHHhcCCCCE-E-CCCCCeEEEEECCC----
Confidence 777776543 467889999999999986 46888999999999999999999888887 4 45667888888753
Q ss_pred CCCCHHHHHHHHHhhcCeEEEcCCCCCC--CCeEEEEeeCChhhHHHHHHHHHHHHHHH
Q 014936 352 DIIDDIDFCFKLAKEESVIILPGTAVGL--KNWLRVTFAVDPYSLEECLDRIKSFYQRH 408 (415)
Q Consensus 352 ~~~~~~~~~~~ll~~~gi~v~~g~~~~~--~~~iRi~~~~~~~~l~~~l~~l~~~~~~~ 408 (415)
+..++...++ ++||.+.||..|+. ++++||+++. .++++++++.|+++++++
T Consensus 307 ---~~~~l~~~l~-~~gi~v~~g~~~~~~~~~~iRis~~~-~~~~~~l~~~l~~~~~~~ 360 (364)
T 1lc5_A 307 ---EDIDLQRRLL-TQRILIRSCANYPGLDSRYYRVAIRS-AAQNERLLAALRNVLTGI 360 (364)
T ss_dssp ---TTCCHHHHHH-TTTEECEECTTSTTCCTTEEEEECCC-HHHHHHHHHHHHHHC---
T ss_pred ---cHHHHHHHHH-HCCcEEeeCcccCCCCCCEEEEEeCC-HHHHHHHHHHHHHHhhcc
Confidence 2334666664 56999999998753 5799999864 677888888888776654
No 62
>1ajs_A Aspartate aminotransferase; PIG, in the presence of ligand 2-methylaspartate; HET: LLP PLA; 1.60A {Sus scrofa} SCOP: c.67.1.1 PDB: 1ajr_A* 3ii0_A* 1aat_A 2cst_A*
Probab=100.00 E-value=4.2e-44 Score=341.48 Aligned_cols=369 Identities=14% Similarity=0.132 Sum_probs=289.2
Q ss_pred cCCccCCcchhhHHHHHHHhhhcccccccCcceeEecccCC-CCCCCCCCcHHHHHHHHHHHhc-CCCCCCCCCCCcHHH
Q 014936 5 NGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDP-TVHSCFHTTHVATEAVAEALLS-EKFNGYAPTAGLPLT 82 (415)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~-~~~~~~~~~~~~~~a~~~~~~~-~~~~~y~~~~g~~~l 82 (415)
.+....+++ .+..+.....+. .+++++||+.|.+ +......+++.+.+++.+.+.. .....|++..|..++
T Consensus 7 ~~~~~~~~~--~~~~~~~~~~~~-----~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~y~~~~g~~~l 79 (412)
T 1ajs_A 7 AEVPQAQPV--LVFKLIADFRED-----PDPRKVNLGVGAYRTDDCQPWVLPVVRKVEQRIANNSSLNHEYLPILGLAEF 79 (412)
T ss_dssp TTCCCCCCC--HHHHHHHHHHTC-----CCTTCEECCSCCCCCTTSCCCCCHHHHHHHHHHHTCTTCCCCCCCTTCCHHH
T ss_pred hhCcccCCc--hHHHHHHHHhhc-----CCCCceeeccceecCCCCCccccHHHHHHHHHhhhChhhccCCCCCCCCHHH
Confidence 344455555 666666644432 2578999999986 3322245678999999988732 244579888899999
Q ss_pred HHHHHHHHhhhCCCCCCCCcEEE--eCChHHHHHHHHH--HhcCCC-----CEEEEcCCCCcchHHHHHhCCCe-EEEee
Q 014936 83 RRAIAEYLSRDLPYKLTPNDVFV--TSGCTQAIDVAMA--LLSRPG-----ANILLPRPGFPIYELSAAFRHIE-VRHFD 152 (415)
Q Consensus 83 r~~ia~~~~~~~~~~~~~~~i~i--~~g~~~al~~~~~--~l~~~g-----d~vi~~~p~y~~~~~~~~~~g~~-~~~~~ 152 (415)
|+++++++...++..+++++|++ |+|+++++.+++. .++++| |+|+++.|+|+++...++..|.+ +..++
T Consensus 80 r~~la~~~~~~~~~~~~~~~v~~~~t~gg~~a~~~~~~~~~~~~~g~~~~~d~Vl~~~p~y~~~~~~~~~~g~~~~~~~~ 159 (412)
T 1ajs_A 80 RTCASRLALGDDSPALQEKRVGGVQSLGGTGALRIGAEFLARWYNGTNNKDTPVYVSSPTWENHNGVFTTAGFKDIRSYR 159 (412)
T ss_dssp HHHHHHHHHCTTCHHHHTTCEEEEEEEHHHHHHHHHHHHHHHHSSSSSCCCSCEEEEESCCTHHHHHHHHTTCSCEEEEE
T ss_pred HHHHHHHHhcCCCCccCCCcEEEEECCCcHHHHHHHHHHHHHhCcCcCCCCCeEEEcCCCcHHHHHHHHHcCCceeEEEe
Confidence 99999999654554457899999 9999999999964 445789 99999999999999999999999 99998
Q ss_pred ccCCCCCCCChhHHHhhcCC---CceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCC--CCccc
Q 014936 153 LLPDKGWEVDLDDIESLADQ---NTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGD--KPFVP 227 (415)
Q Consensus 153 ~~~~~~~~~~~~~l~~~~~~---~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~--~~~~~ 227 (415)
..+++++.+|++++++.+++ +++++++++|+||||.+++.+++++|+++|+++|+++|+||+|.++.+++ ....+
T Consensus 160 ~~~~~~~~~d~~~l~~~l~~~~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~ 239 (412)
T 1ajs_A 160 YWDTEKRGLDLQGFLSDLENAPEFSIFVLHACAHNPTGTDPTPEQWKQIASVMKRRFLFPFFDSAYQGFASGNLEKDAWA 239 (412)
T ss_dssp CEETTTTEECHHHHHHHHHHSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTTTTSCHHHHTHH
T ss_pred eecCCCCccCHHHHHHHHHhCCCCcEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEcccccccCCcccccchH
Confidence 75546678999999988864 56788899999999999999999999999999999999999999988764 12223
Q ss_pred ccccC-CCCCeEEEccCccccCCCCceEEEEEe---eCCCCCCChHH----HHHHHHhhc-cccCCchhHHHHHHHHhhC
Q 014936 228 MGVFG-STVPILTLGSLSKRWIVPGWRLGWFVT---TDPCGMFRKPK----VVERMKKYF-DILGDPATFIQAAVPSILQ 298 (415)
Q Consensus 228 ~~~~~-~~~~~i~~~s~sK~~~~~G~r~G~~~~---~~~~~~~~~~~----~~~~~~~~~-~~~~~~~~~~~~a~~~~l~ 298 (415)
+..+. ..++++++.|+||.|+++|+|+||+++ ++ + +++.+.... ..+.++++++|.++.++|+
T Consensus 240 ~~~~~~~~~~~i~~~s~sK~~~~~G~riG~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~ 311 (412)
T 1ajs_A 240 IRYFVSEGFELFCAQSFSKNFGLYNERVGNLTVVAKEP--------DSILRVLSQMQKIVRVTWSNPPAQGARIVARTLS 311 (412)
T ss_dssp HHHHHHTTCCEEEEEECTTTSCCGGGCEEEEEEECSSH--------HHHHHHHHHHHHHHHTTTSSCCSHHHHHHHHHHH
T ss_pred HHHHhccCCcEEEEEecccccCCCCcceEEEEEecCCH--------HHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHc
Confidence 33332 345789999999999999999999998 33 3 444444422 2234468899999999997
Q ss_pred CCc-----HHHHHHHHHHHHHHHHHHHHHhhcCC---CCcCCCCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeE
Q 014936 299 QPD-----EVFFKKTLNLLKQSVDICYNKIKEIP---CISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVI 370 (415)
Q Consensus 299 ~~~-----~~~~~~~~~~~~~~~~~l~~~l~~~~---~~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~ 370 (415)
... ++++++.+++++++++.+.+.|++++ ++. +..|.+|+|+|+.++ .+++..+++++||.
T Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~-~~~~~~~~~~~~~~~----------~~~~~~~l~~~gv~ 380 (412)
T 1ajs_A 312 DPELFHEWTGNVKTMADRILSMRSELRARLEALKTPGTWN-HITDQIGMFSFTGLN----------PKQVEYLINQKHIY 380 (412)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSCCH-HHHHCCSSEEECCCC----------HHHHHHHHHTTCEE
T ss_pred CcchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCee-EEcCCCceEEEeCCC----------HHHHHHHHHhCCEE
Confidence 642 34778899999999999999999874 366 446788999997552 35667777888999
Q ss_pred EEcCCCCCCCCeEEEEee-CChhhHHHHHHHHHHHHHH
Q 014936 371 ILPGTAVGLKNWLRVTFA-VDPYSLEECLDRIKSFYQR 407 (415)
Q Consensus 371 v~~g~~~~~~~~iRi~~~-~~~~~l~~~l~~l~~~~~~ 407 (415)
+.|+ +||+++ .+++++++++++|++++++
T Consensus 381 v~~~--------~Ris~~~~~~~~i~~~~~~l~~~l~~ 410 (412)
T 1ajs_A 381 LLPS--------GRINMCGLTTKNLDYVATSIHEAVTK 410 (412)
T ss_dssp CCTT--------SEEEGGGCCTTTHHHHHHHHHHHHHH
T ss_pred ecCC--------cEEEeeeCCHHHHHHHHHHHHHHHHh
Confidence 9874 599997 5899999999999998764
No 63
>3if2_A Aminotransferase; YP_265399.1, structura genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI-2; HET: PLP; 2.50A {Psychrobacter arcticus 273-4}
Probab=100.00 E-value=2.4e-44 Score=346.52 Aligned_cols=386 Identities=20% Similarity=0.268 Sum_probs=295.4
Q ss_pred CccccCCccCCcchhhHHHHHHHhhhcccccccCccee-EecccCCCCCCCCCCcHHHHHHHHHHHhc-------CC---
Q 014936 1 MEISNGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVI-SLAMGDPTVHSCFHTTHVATEAVAEALLS-------EK--- 69 (415)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i-~l~~g~~~~~~~~~~~~~~~~a~~~~~~~-------~~--- 69 (415)
|++|+++..+.+. ..+...+..+.+.. +.+++| +|+.|.|... ..+.+.+++++.+.+.+ ..
T Consensus 2 ~~~s~~~~~~~~~-~~~~~~~~~~~~~~----~~~~~i~~l~~g~p~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 74 (444)
T 3if2_A 2 MKFSKFGQKFTQP-TGISQLMDDLGDAL----KSDQPVNMLGGGNPAKI--DAVNELFLETYKALGNDNDTGKANSSAII 74 (444)
T ss_dssp CCCCHHHHHHHSC-CHHHHHHHHHHHHH----HSSSCCEECSCCCCCCC--HHHHHHHHHHHHHHHSCSCTTCCCCHHHH
T ss_pred CCcchhhhhccCc-hhHHHHHHHHHhhh----cCchhhhccCCCCCCcc--cchHHHHHHHHHHHHhccccccccchhhh
Confidence 7888888777764 24555555444443 246789 9999997621 11225667777776654 21
Q ss_pred -CCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCC--------------EEEEc-CCC
Q 014936 70 -FNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGA--------------NILLP-RPG 133 (415)
Q Consensus 70 -~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd--------------~vi~~-~p~ 133 (415)
...|++..|.+++|+++|+|+++.+|.++++++|++|+|+++++++++.++.++|| +|+++ .|+
T Consensus 75 ~~~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~t~al~~~~~~l~~~gd~~~~~~~~~~g~~~~vi~~~~p~ 154 (444)
T 3if2_A 75 SMANYSNPQGDSAFIDALVGFFNRHYDWNLTSENIALTNGSQNAFFYLFNLFGGAFVNEHSQDKESKSVDKSILLPLTPE 154 (444)
T ss_dssp HHHSCCCTTCCHHHHHHHHHHHHHHHCCCCCGGGEEEESSHHHHHHHHHHHSSEEEECC-------CEEEEEEEESSSSC
T ss_pred hhhccCCCCCCHHHHHHHHHHHHhhcCCCCCHHHEEEecCcHHHHHHHHHHHhCCCccccccccccccccceEEEeCCCC
Confidence 24799889999999999999998889889999999999999999999999998888 78775 999
Q ss_pred CcchHHH------HHhCCCeEEEeeccCCC---CCCCChhHHHhh---cCCCceEEEecCCCCccccCCCHHHHHHHHHH
Q 014936 134 FPIYELS------AAFRHIEVRHFDLLPDK---GWEVDLDDIESL---ADQNTVALVIINPGNPCGNVYSYQHLQKLAET 201 (415)
Q Consensus 134 y~~~~~~------~~~~g~~~~~~~~~~~~---~~~~~~~~l~~~---~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~ 201 (415)
|..+... +...|..+..++.+.++ ++.+|++.|+++ ++++++++++++|+||||.++|.+++++|+++
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~~l~~~l~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~ 234 (444)
T 3if2_A 155 YIGYSDVHVEGQHFAAVLPHIDEVTHDGEEGFFKYRVDFEALENLPALKEGRIGAICCSRPTNPTGNVLTDEEMAHLAEI 234 (444)
T ss_dssp CGGGTTCCSSSCCEEECCCEEEEEEETTEEEEEEEECCHHHHHTCHHHHTTCEEEEEEESSCTTTCCCCCHHHHHHHHHH
T ss_pred ccchhhcccccchhhccCceEEecccccccCccccCCCHHHHHHHHHhcCCCceEEEeCCCCCCCCCcCCHHHHHHHHHH
Confidence 9988763 44567788777765321 357899999988 67789999999999999999999999999999
Q ss_pred HhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhhcc-
Q 014936 202 ANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFD- 280 (415)
Q Consensus 202 ~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~- 280 (415)
|+++|+++|+||+|+.+... ....... ....+++++++|+||. +++|+|+||+++++ ++++.+.....
T Consensus 235 a~~~~~~li~De~~~~~~~~-~~~~~~~-~~~~~~~i~~~S~sK~-~~~G~r~G~~~~~~--------~l~~~~~~~~~~ 303 (444)
T 3if2_A 235 AKRYDIPLIIDNAYGMPFPN-IIYSDAH-LNWDNNTILCFSLSKI-GLPGMRTGIIVADA--------KVIEAVSAMNAV 303 (444)
T ss_dssp HHHTTCCEEEECTTCTTTTC-CBCSCCC-CCCCTTEEEEEESTTT-TCGGGCCEEEECCH--------HHHHHHHHHHHH
T ss_pred HHHCCCEEEEECCCCCcccc-ccccccc-ccCCCCEEEEechhhc-cCCCCceEEEEECH--------HHHHHHHHHHHh
Confidence 99999999999999863211 1111111 1224578999999997 89999999999864 67777776633
Q ss_pred ccCCchhHHHHHHHHhhCCCc-HHHHHH-HHHHHHHHHHHHHHHhhc-CCC--CcCCCCCCCceEEEEecCccccCCCCC
Q 014936 281 ILGDPATFIQAAVPSILQQPD-EVFFKK-TLNLLKQSVDICYNKIKE-IPC--ISCPHKPEGSMAVMLKLNLSLLDDIID 355 (415)
Q Consensus 281 ~~~~~~~~~~~a~~~~l~~~~-~~~~~~-~~~~~~~~~~~l~~~l~~-~~~--~~~~~~p~~g~~~~~~l~~~~~~~~~~ 355 (415)
.+.+++++.+.++..+++... ..+..+ .++.++++++.+.+.|.+ +++ +. +..|.+|+++|+.++... .+
T Consensus 304 ~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~-~~~~~~g~~~~~~~~~~~----~~ 378 (444)
T 3if2_A 304 VNLAPTRFGAAIATPLVANDRIKQLSDNEIKPFYQKQATLAVKLLKQALGDYPLM-IHKPEGAIFLWLWFKDLP----IS 378 (444)
T ss_dssp HHSSCCCHHHHHHHHHHHTSHHHHHHHHTHHHHHHHHHHHHHHHHHHHSSSSSEE-EECCCBSSEEEEEETTCS----SC
T ss_pred ccCCCChHHHHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHHHHHHHhcccCCce-EecCCccEEEEEEcCCCC----CC
Confidence 346778899999999887643 233333 667788888888888875 554 44 346888999999886411 25
Q ss_pred HHHHHHHHHhhcCeEEEcCCCCCC----------CCeEEEEeeCChhhHHHHHHHHHHHHHHHHH
Q 014936 356 DIDFCFKLAKEESVIILPGTAVGL----------KNWLRVTFAVDPYSLEECLDRIKSFYQRHAK 410 (415)
Q Consensus 356 ~~~~~~~ll~~~gi~v~~g~~~~~----------~~~iRi~~~~~~~~l~~~l~~l~~~~~~~~~ 410 (415)
..++...+ .++||.+.||+.|.. .+++||+++.+++++++++++|+++++++..
T Consensus 379 ~~~l~~~l-~~~gi~v~~g~~~~~~~~~~~~~~~~~~iRis~~~~~e~i~~~l~~l~~~~~~~~~ 442 (444)
T 3if2_A 379 TLDLYERL-KAKGTLIVPSEYFFPGVDVSDYQHAHECIRMSIAADEQTLIDGIKVIGEVVRELYD 442 (444)
T ss_dssp HHHHHHHH-HHTTEECEEGGGSCTTCCCTTCSGGGSEEEEESSSCHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHH-HHCCeEEecchhhcCCCCCcccccCCCeEEEEEeCCHHHHHHHHHHHHHHHHHHHc
Confidence 66776665 677999999998854 2689999988999999999999999987653
No 64
>1yaa_A Aspartate aminotransferase; HET: PLP; 2.05A {Saccharomyces cerevisiae} SCOP: c.67.1.1
Probab=100.00 E-value=3.2e-44 Score=342.23 Aligned_cols=374 Identities=13% Similarity=0.114 Sum_probs=288.1
Q ss_pred CccccCCccCCcchhhHHHHHHHhhhcccccccCcceeEecccCC-CCCCCCCCcHHHHHHHHH-HHhcCCCCCCCCCCC
Q 014936 1 MEISNGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDP-TVHSCFHTTHVATEAVAE-ALLSEKFNGYAPTAG 78 (415)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~-~~~~~~~~~~~~~~a~~~-~~~~~~~~~y~~~~g 78 (415)
|..+++....+++ .+......+.+. .+++++||+.|.+ +.....++++.+++++.+ .+.......|++..|
T Consensus 2 ~~~~~~~~~~~~~--~~~~~~~~~~~~-----~~~~~i~l~~g~~~d~~~~~~~~~~v~~a~~~~~~~~~~~~~y~~~~g 74 (412)
T 1yaa_A 2 ATLFNNIELLPPD--ALFGIKQRYGQD-----QRATKVDLGIGAYRDDNGKPWVLPSVKAAEKLIHNDSSYNHEYLGITG 74 (412)
T ss_dssp TTTTTTCCCCCCC--TTHHHHHHHHTC-----CCSSCEECSSCCCBCTTSCBCCCHHHHHHHHHHHTCTTCCCCCCCTTC
T ss_pred cchhccCcccCCC--cHHHHHHHHhcC-----CCCCeEEEeeeeeeCCCCCCCCcHHHHHHHHhhhcCcccccCCCCCCC
Confidence 3445666666666 555555544333 2577899999986 322234577999999999 876544557988889
Q ss_pred cHHHHHHHHHHHhhhCCCCCCCCcEEE--eCChHHHHHHHH--HHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeecc
Q 014936 79 LPLTRRAIAEYLSRDLPYKLTPNDVFV--TSGCTQAIDVAM--ALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLL 154 (415)
Q Consensus 79 ~~~lr~~ia~~~~~~~~~~~~~~~i~i--~~g~~~al~~~~--~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~ 154 (415)
.+++|+++++++...+|..+++++|++ |+|+++++.+++ ..+.++||+|+++.|+|+.+...++..|.++..++..
T Consensus 75 ~~~lr~~ia~~~~~~~~~~~~~~~i~~~~t~g~~~a~~~~~~~~~~~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~v~~~ 154 (412)
T 1yaa_A 75 LPSLTSNAAKIIFGTQSDALQEDRVISVQSLSGTGALHISAKFFSKFFPDKLVYLSKPTWANHMAIFENQGLKTATYPYW 154 (412)
T ss_dssp CHHHHHHHHHHHHCTTCHHHHTTCEEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEESCCTTHHHHHHTTTCCEEEEECE
T ss_pred cHHHHHHHHHHHhcCCCCCCCcceEEEEeccchHhHHHHHHHHHHHhCCCCEEEEeCCCCccHHHHHHHcCceEEEEeee
Confidence 999999999999765555567899999 999999999884 3444799999999999999999999999999999872
Q ss_pred CCCCCCCChhHHHhhcCCC---ceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCC--CCccccc
Q 014936 155 PDKGWEVDLDDIESLADQN---TVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGD--KPFVPMG 229 (415)
Q Consensus 155 ~~~~~~~~~~~l~~~~~~~---~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~--~~~~~~~ 229 (415)
..+++.+|++++++.++++ +.++++++|+||||.+++.+++++|+++|+++|+++|+||+|..+.+++ ....++.
T Consensus 155 ~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~p~nPtG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~ 234 (412)
T 1yaa_A 155 ANETKSLDLNGFLNAIQKAPEGSIFVLHSCAHNPTGLDPTSEQWVQIVDAIASKNHIALFDTAYQGFATGDLDKDAYAVR 234 (412)
T ss_dssp ETTTTEECHHHHHHHHHHSCTTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTSSSCHHHHTHHHH
T ss_pred cCCCCccCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEecccccccCCcccchhHHHH
Confidence 2235779999999888653 4455569999999999999999999999999999999999999888764 1222232
Q ss_pred ccC-CCC---CeEEEccCccccCCCCceEEEEE--e----eCCCCCCChHH----HHHHHHhh-ccccCCchhHHHHHHH
Q 014936 230 VFG-STV---PILTLGSLSKRWIVPGWRLGWFV--T----TDPCGMFRKPK----VVERMKKY-FDILGDPATFIQAAVP 294 (415)
Q Consensus 230 ~~~-~~~---~~i~~~s~sK~~~~~G~r~G~~~--~----~~~~~~~~~~~----~~~~~~~~-~~~~~~~~~~~~~a~~ 294 (415)
.+. ..+ ++++++|+||.|+++|+|+||++ + ++ ++ +++.+... ...+.+++++.|.++.
T Consensus 235 ~~~~~~~~~~~~i~~~s~sK~~~~~GlriG~~~~~~~~~~~~-------~~~~~~l~~~l~~~~~~~~~~~~~~~~~a~~ 307 (412)
T 1yaa_A 235 LGVEKLSTVSPVFVCQSFAKNAGMYGERVGCFHLALTKQAQN-------KTIKPAVTSQLAKIIRSEVSNPPAYGAKIVA 307 (412)
T ss_dssp HHHHHTTTTCCEEEEEECTTTSCCGGGCEEEEEEECCSCTTH-------HHHHHHHHHHHHHHHHTTTSSCCHHHHHHHH
T ss_pred HHHhcCCCCcceEEEeccCCCCCCcCCcceEEEEEecCCCCC-------HHHHHHHHHHHHHHHhhccCCCChHHHHHHH
Confidence 221 123 78999999999998899999998 6 12 24 66666653 2334456888999999
Q ss_pred HhhCCCc-----HHHHHHHHHHHHHHHHHHHHHhhcCC---CCcCCCCCCCceEEEEecCccccCCCCCHHHHHHHHHhh
Q 014936 295 SILQQPD-----EVFFKKTLNLLKQSVDICYNKIKEIP---CISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKE 366 (415)
Q Consensus 295 ~~l~~~~-----~~~~~~~~~~~~~~~~~l~~~l~~~~---~~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~ 366 (415)
++|+... ++++++.+++++++++.+.+.|++++ ++. +..|.+|+|+|+.++ ... +..++++
T Consensus 308 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~-~~~~~~~~~~~~~~~---------~~~-~~~~l~~ 376 (412)
T 1yaa_A 308 KLLETPELTEQWHKDMVTMSSRITKMRHALRDHLVKLGTPGNWD-HIVNQCGMFSFTGLT---------PQM-VKRLEET 376 (412)
T ss_dssp HHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSSCCT-HHHHCCSSEEECCCC---------HHH-HHHHHHH
T ss_pred HHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCee-eeccCceEEEeeCCC---------HHH-HHHHHHh
Confidence 9997642 35788899999999999999999874 376 446888999997552 333 4777778
Q ss_pred cCeEEEcCCCCCCCCeEEEEeeC-ChhhHHHHHHHHHHHHHH
Q 014936 367 ESVIILPGTAVGLKNWLRVTFAV-DPYSLEECLDRIKSFYQR 407 (415)
Q Consensus 367 ~gi~v~~g~~~~~~~~iRi~~~~-~~~~l~~~l~~l~~~~~~ 407 (415)
+||.+.| ++||+++. +++++++++++|+++++.
T Consensus 377 ~gi~v~~--------~~Ris~~~~~~~~i~~~~~~l~~~~~~ 410 (412)
T 1yaa_A 377 HAVYLVA--------SGRASIAGLNQGNVEYVAKAIDEVVRF 410 (412)
T ss_dssp HCEECCT--------TSEEEGGGCCTTTHHHHHHHHHHHHHH
T ss_pred CCEEecc--------CcEEEEccCCHhHHHHHHHHHHHHHHh
Confidence 8999876 47999974 899999999999988753
No 65
>3meb_A Aspartate aminotransferase; pyridoxal PHOS transferase, structural genomics, seattle structural genomi for infectious disease, ssgcid; HET: PLP; 1.90A {Giardia lamblia}
Probab=100.00 E-value=3.5e-43 Score=338.06 Aligned_cols=374 Identities=16% Similarity=0.144 Sum_probs=285.2
Q ss_pred cccCCccCCcchhhHHHHHHHhhhcccccccCcceeEecccCC-CCCCCCCCcHHHHHHHHHHH--hcCCCCCCCCCCCc
Q 014936 3 ISNGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDP-TVHSCFHTTHVATEAVAEAL--LSEKFNGYAPTAGL 79 (415)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~-~~~~~~~~~~~~~~a~~~~~--~~~~~~~y~~~~g~ 79 (415)
...+....+++ ++......+..+- .+.+|||+.|.+ +.....++.+++++++.+.. .......|.+..|.
T Consensus 24 ~~~~~~~~~~~--~i~~~~~~~~~~~-----~~~~i~l~~g~~~d~~~~~~v~~av~~a~~~~~~~~~~~~~~Y~~~~G~ 96 (448)
T 3meb_A 24 VFSGFPASPPD--AILNLTVLYNADT-----NPKKVNLGVGAYRDESGKPWILPAVKEAEAIISSDLSKYNKEYPPVAGF 96 (448)
T ss_dssp TTTTCCCCCCC--TTHHHHHHHHHCC-----CTTCEEESSCCCCCTTSCCCCCHHHHHHHHHHHHCTTTTCCSCCCTTCC
T ss_pred HHhcCCCCCCC--hHHHHHHHHHhCC-----CCCeEEeecccccCCCCCEechHHHHHHHHHHhhcccCCCCCCCCCcch
Confidence 33444444444 5666665444432 345799999997 53333456788888877665 22334589888999
Q ss_pred HHHHHHHHHHHhhhCCCC---CCCCcEEE--eCChHHHHHH--HHHHhcCCCCEEEEcCCCCcchHHHHH----hCCCeE
Q 014936 80 PLTRRAIAEYLSRDLPYK---LTPNDVFV--TSGCTQAIDV--AMALLSRPGANILLPRPGFPIYELSAA----FRHIEV 148 (415)
Q Consensus 80 ~~lr~~ia~~~~~~~~~~---~~~~~i~i--~~g~~~al~~--~~~~l~~~gd~vi~~~p~y~~~~~~~~----~~g~~~ 148 (415)
+++|+++++++. |.. +++++|++ |+|+++++.+ .+..++++||+|++++|+|..+...++ ..|.++
T Consensus 97 ~~lr~~ia~~l~---g~~~~~~~~~~i~~~~t~ggt~al~l~~~~~~~~~~gd~Vlv~~p~~~~~~~~~~~~~~~~G~~v 173 (448)
T 3meb_A 97 PLFLEAAQFLMF---GKDSKAAQEGRIASCQSLSGTGSLHIGFEFLHLWMPKAEFYMPSTTWPNHYGIYDKVFNKLKVPY 173 (448)
T ss_dssp HHHHHHHHHHHH---CTTCHHHHTTCEEEEEESHHHHHHHHHHHHHHHHCTTCCEEEESSCCTHHHHHHHHHHCTTTSCC
T ss_pred HHHHHHHHHHhc---CCCccccCcCcEEEEECCcHHHHHHHHHHHHHHhCCCCEEEECCCCCHhHHHHHHhhHHhCCCeE
Confidence 999999999983 222 22689999 9999999988 455667899999999999999999999 999999
Q ss_pred EEeeccCCC-CCCCChhHHHhhcCC---CceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCC-
Q 014936 149 RHFDLLPDK-GWEVDLDDIESLADQ---NTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDK- 223 (415)
Q Consensus 149 ~~~~~~~~~-~~~~~~~~l~~~~~~---~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~- 223 (415)
+.++....+ ++.+|++.+++.+++ +++++++++||||||.+++.+++++|+++|+++|+++|+||+|..+.+++.
T Consensus 174 ~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~l~~~~~~~li~Deay~~~~~~~~~ 253 (448)
T 3meb_A 174 KEYTYLRKDGELEIDFSNTKKDIQSAPEKSIFLFHACAHNPSGIDFTEAQWKELLPIMKEKKHIAFFDSAYQGFATGSFE 253 (448)
T ss_dssp EEECCBCTTSCSSBCHHHHHHHHHHSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTTSSSCHH
T ss_pred EEEeccccccCCCcCHHHHHHHHHhCCCCcEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHCCCEEEEecccccccCCCcc
Confidence 999984444 678999999998863 577888999999999999999999999999999999999999999887642
Q ss_pred -Cccccccc-CCCCCeEEEccCccccCCCCceEEEE--Ee--------eCCCCCCChHHHHHHHHhh-ccccCCchhHHH
Q 014936 224 -PFVPMGVF-GSTVPILTLGSLSKRWIVPGWRLGWF--VT--------TDPCGMFRKPKVVERMKKY-FDILGDPATFIQ 290 (415)
Q Consensus 224 -~~~~~~~~-~~~~~~i~~~s~sK~~~~~G~r~G~~--~~--------~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 290 (415)
...++..+ ...++++++.||||.|+++|+|+||+ ++ +++... .++.+.+... ...+.+++.+.|
T Consensus 254 ~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~l~~v~~~~~~~~~~~~~~~---~~l~~~l~~~~~~~~~~~~~~~~ 330 (448)
T 3meb_A 254 ADAFAVRMFVDAGVEVLVAQSFSKNFGLYGERIGCLHVVHAGVEGSVEKNKALS---AAMVSGMTLQIRKTWSMSAIHGA 330 (448)
T ss_dssp HHTHHHHHHHHTTCCEEEEEECTTTSCCGGGCCEEEEEECCCCSSSHHHHHHHH---HHHHHHHHHHHHTTTSSCCHHHH
T ss_pred cCchhHHHHhhcCCcEEEEecccccCCCccccceeeeeeeccccccccCCHHHH---HHHHHHHHHHHhcccCCccHHHH
Confidence 12222222 23457899999999999999999998 65 331000 0355555543 233456788999
Q ss_pred HHHHHhhCCCc-----HHHHHHHHHHHHHHHHHHHHHhhcC--CC------CcCCCCCCCceEEEEecCccccCCCCCHH
Q 014936 291 AAVPSILQQPD-----EVFFKKTLNLLKQSVDICYNKIKEI--PC------ISCPHKPEGSMAVMLKLNLSLLDDIIDDI 357 (415)
Q Consensus 291 ~a~~~~l~~~~-----~~~~~~~~~~~~~~~~~l~~~l~~~--~~------~~~~~~p~~g~~~~~~l~~~~~~~~~~~~ 357 (415)
.++..+|.... .+++++.+++++++++.+.+.|+++ ++ +. ...|.+|+|+|+.++ .
T Consensus 331 ~a~~~~l~~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~----------~ 399 (448)
T 3meb_A 331 YIVQVIVHDKRLLQMFYDNVKEMSARIHRMRSLLHASLAKRKTPGPGSKGTWD-HILTAIGMFTFTGLT----------P 399 (448)
T ss_dssp HHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCSTTTCCCT-HHHHCCSSEEECCCC----------H
T ss_pred HHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCcCcccccc-eeCCCceEEEecCCC----------H
Confidence 99999987632 1447888899999999999999876 55 55 346889999997663 3
Q ss_pred HHHHHHHhhcCeEEEcCCCCCCCCeEEEEeeC-ChhhHHHHHHHHHHHHHH
Q 014936 358 DFCFKLAKEESVIILPGTAVGLKNWLRVTFAV-DPYSLEECLDRIKSFYQR 407 (415)
Q Consensus 358 ~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~l~~~l~~l~~~~~~ 407 (415)
+++..+++++||.+.||+ .|||++. +++++++++++|++++++
T Consensus 400 ~~~~~ll~~~gV~v~~G~-------gRis~a~~~~~~i~~~~~~l~~~l~~ 443 (448)
T 3meb_A 400 EHVDYLKEKWSIYLVKAG-------GRMSMCGLTESNCDYVAEAIHDAVTK 443 (448)
T ss_dssp HHHHHHHHHHCEEECSGG-------GEEEGGGCCTTTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCEEEeCCC-------cEEEEecCCHHHHHHHHHHHHHHHHh
Confidence 567778888999999976 2999965 888899999999998873
No 66
>3ftb_A Histidinol-phosphate aminotransferase; structural genomics, PSI, MCSG, protein structure initiative; 2.00A {Clostridium acetobutylicum} SCOP: c.67.1.0
Probab=100.00 E-value=8.5e-43 Score=326.55 Aligned_cols=333 Identities=18% Similarity=0.273 Sum_probs=273.3
Q ss_pred cCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHH
Q 014936 33 NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQA 112 (415)
Q Consensus 33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~a 112 (415)
++++++||+.|.+. +++++.+++++.+.+.. ...|++ .+..++|+.+++++ +++++++++|+|++++
T Consensus 24 ~~~~~idl~~~~~~----~~~~~~v~~a~~~~~~~--~~~y~~-~~~~~l~~~la~~~------~~~~~~i~~~~g~t~a 90 (361)
T 3ftb_A 24 KGRELLDYSSNINP----LGIPKSFLNNIDEGIKN--LGVYPD-VNYRRLNKSIENYL------KLKDIGIVLGNGASEI 90 (361)
T ss_dssp ----CEETTCCCCT----TCSCHHHHTTHHHHHHG--GGSCCC-TTCHHHHHHHHHHH------TCCSCEEEEESSHHHH
T ss_pred CCCCEEEecCCCCC----CCCCHHHHHHHHHHHHH--hcCCCC-ccHHHHHHHHHHHh------CCCcceEEEcCCHHHH
Confidence 47889999999754 66789999999998875 346765 67899999999999 5678999999999999
Q ss_pred HHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCH
Q 014936 113 IDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSY 192 (415)
Q Consensus 113 l~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~ 192 (415)
+.+++.++ |+|+++.|+|+.+...++..|.+++.++.++++ .++++++++++++ ++++++++|+||||.++|.
T Consensus 91 l~~~~~~~----d~vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~~--~~~~~~l~~~l~~-~~~v~i~~p~nptG~~~~~ 163 (361)
T 3ftb_A 91 IELSISLF----EKILIIVPSYAEYEINAKKHGVSVVFSYLDENM--CIDYEDIISKIDD-VDSVIIGNPNNPNGGLINK 163 (361)
T ss_dssp HHHHHTTC----SEEEEEESCCTHHHHHHHHTTCEEEEEECCTTS--CCCHHHHHHHTTT-CSEEEEETTBTTTTBCCCH
T ss_pred HHHHHHHc----CcEEEecCChHHHHHHHHHcCCeEEEeecCccc--CCCHHHHHHhccC-CCEEEEeCCCCCCCCCCCH
Confidence 99999888 899999999999999999999999999986543 4678999999988 9999999999999999999
Q ss_pred HHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHH
Q 014936 193 QHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVV 272 (415)
Q Consensus 193 ~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~ 272 (415)
+++++|+++|+++|+++|+||+|+++.++ ............++++++.|+||.++++|+|+||+++.+ +++.
T Consensus 164 ~~l~~i~~~~~~~~~~li~De~~~~~~~~-~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~g~~~~~~-------~~~~ 235 (361)
T 3ftb_A 164 EKFIHVLKLAEEKKKTIIIDEAFIEFTGD-PSSSFVGEIKNYSCLFIIRAMTKFFAMPGIRFGYGITNN-------KEIA 235 (361)
T ss_dssp HHHHHHHHHHHHHTCEEEEECSSGGGTCC-TTSSSGGGTTTCSSEEEEEESSSTTSCGGGCCEEEEESC-------HHHH
T ss_pred HHHHHHHHHhhhcCCEEEEECcchhhcCC-cccchhHhcccCCCEEEEeeChhhcCCCCcceeEEEeCC-------HHHH
Confidence 99999999999999999999999998876 333333344455678999999999999999999998433 2688
Q ss_pred HHHHhhccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCccccCC
Q 014936 273 ERMKKYFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLDD 352 (415)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~~~ 352 (415)
+.++.... .++++++.+.++.++|+. .+++++.+++++++++.+.+.|+++|++.. ..+..|.|+|++++.
T Consensus 236 ~~~~~~~~-~~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~-~~~~~~~~~~~~~~~----- 306 (361)
T 3ftb_A 236 AKIKAKQN-PWNINCFAEMAAINCLKD--TNYIEESLLWIKKERKRFIEELNKIGFIKR-VFSPHANFVLCRLEN----- 306 (361)
T ss_dssp HHHHTTSC-TTCSCHHHHHHHHHTSSC--HHHHHHHHHHHHHHHHHHHHHHHHSSSEEE-EECCSSSEEEEEESS-----
T ss_pred HHHHhhCC-CCCCCHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHHHHhCCCCce-ecCCCCeEEEEEcCC-----
Confidence 88877654 467889999999999985 578899999999999999999999887761 245567788888864
Q ss_pred CCCHHHHHHHHHhhcCeEEEcCCCCCC--CCeEEEEeeCChhhHHHHHHHHHHHH
Q 014936 353 IIDDIDFCFKLAKEESVIILPGTAVGL--KNWLRVTFAVDPYSLEECLDRIKSFY 405 (415)
Q Consensus 353 ~~~~~~~~~~ll~~~gi~v~~g~~~~~--~~~iRi~~~~~~~~l~~~l~~l~~~~ 405 (415)
.+..++...+++ +||.+.||..|+. ++++|++++ +.++++.+++.|+++.
T Consensus 307 -~~~~~l~~~l~~-~gi~v~~g~~~~~~~~~~iRis~~-~~~~~~~l~~~l~~~~ 358 (361)
T 3ftb_A 307 -ISGEKLYDSLLK-EDIVIRRCCNFIGLDDSFVRFAIK-DEKKNTKFLRALKGVE 358 (361)
T ss_dssp -SCHHHHHHHHHT-TTEECEECTTSTTCCTTEEEEECC-CHHHHHHHHHHHHHHH
T ss_pred -CCHHHHHHHHHH-CCeEEeeCccCCCCCCCEEEEEcC-CHHHHHHHHHHHHHHH
Confidence 256777777755 5999999998864 689999997 4555566666665544
No 67
>3b1d_A Betac-S lyase; HET: PLP PLS EPE; 1.66A {Streptococcus anginosus} PDB: 3b1c_A* 3b1e_A*
Probab=100.00 E-value=1e-47 Score=364.02 Aligned_cols=351 Identities=17% Similarity=0.281 Sum_probs=292.5
Q ss_pred ceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHH
Q 014936 36 KVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDV 115 (415)
Q Consensus 36 ~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~ 115 (415)
++++|+.|+++ +++++.+.+++.+.+... ...|++. ..++|+++++++.+.+|..+++++|++|+|+++++.+
T Consensus 32 ~~i~l~~~~~~----~~~~~~v~~a~~~~~~~~-~~~y~~~--~~~l~~~la~~l~~~~g~~~~~~~v~~~~g~~~a~~~ 104 (392)
T 3b1d_A 32 QLLPAWIADMD----FEVMPEVKQAIHDYAEQL-VYGYTYA--SDELLQAVLDWEKSEHQYSFDKEDIVFVEGVVPAISI 104 (392)
Confidence 89999999864 677899999999887643 3477764 7899999999998877877889999999999999999
Q ss_pred HHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCC-CCCCChhHHHhhcC-CCceEEEecCCCCccccCCCHH
Q 014936 116 AMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDK-GWEVDLDDIESLAD-QNTVALVIINPGNPCGNVYSYQ 193 (415)
Q Consensus 116 ~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~-~~~~~~~~l~~~~~-~~~~~v~i~~p~nptG~~~~~~ 193 (415)
++.++.++||+|+++.|+|+.+...++..|.++..++.++++ +|.+|++.+++.++ ++++++++++|+||||.+++.+
T Consensus 105 ~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~~~ 184 (392)
T 3b1d_A 105 AIQAFTKEGEAVLINSPVYPPFARSVRLNNRKLVSNSLKEENGLFQIDFEQLENDIVENDVKLYLLCNPHNPGGRVWERE 184 (392)
Confidence 999999999999999999999999999999999888875332 46689999999887 5788899999999999999999
Q ss_pred HHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCC--CCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHH
Q 014936 194 HLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS--TVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKV 271 (415)
Q Consensus 194 ~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~--~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~ 271 (415)
++++|+++|+++|+++|+||+|.++.+++....++..+.. .++++++.|+||.|+++|+|+||++++++ ++
T Consensus 185 ~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~-------~~ 257 (392)
T 3b1d_A 185 VLEQIGHLCQKHHVILVSDEIHQDLTLFGHEHVSFNTVSPDFKDFALVLSSATKTFNIAGTKNSYAIIENP-------TL 257 (392)
Confidence 9999999999999999999999999887765555655543 56789999999999899999999998652 26
Q ss_pred HHHHHhhcccc--CCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhc-CCCCcCCCCCCCceEEEEecCcc
Q 014936 272 VERMKKYFDIL--GDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKE-IPCISCPHKPEGSMAVMLKLNLS 348 (415)
Q Consensus 272 ~~~~~~~~~~~--~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~~~~~~~~~p~~g~~~~~~l~~~ 348 (415)
++.+....... .+++++.|.++.++|+.. ++++++.++.++++++.+.+.|++ +|++. +..|.+++++|++++..
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~-~~~~~~~~~~~i~~~~~ 335 (392)
T 3b1d_A 258 CAQFKHQQLVNNHHEVSSLGYIATETAYRYG-KPWLVALKAVLEENIQFAVEYFAQEAPRLK-VMKPQGTYLIWLDFSDY 335 (392)
Confidence 66665553322 356888898888888753 467888999999999999999987 78887 54788888889888641
Q ss_pred ccCCCCCHHHHHHHHHhhcCeEEEcCCCCCC--CCeEEEEeeCChhhHHHHHHHHHHHHH
Q 014936 349 LLDDIIDDIDFCFKLAKEESVIILPGTAVGL--KNWLRVTFAVDPYSLEECLDRIKSFYQ 406 (415)
Q Consensus 349 ~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~--~~~iRi~~~~~~~~l~~~l~~l~~~~~ 406 (415)
. .+..++...+++++||.+.||..|+. ++++||+++.+++++++++++|+++++
T Consensus 336 ~----~~~~~l~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~~~~~e~i~~~l~~l~~~l~ 391 (392)
T 3b1d_A 336 G----LTDDALFTLLHDQAKVILNRGSDYGSEGELHARLNIAAPKSLVEEICKRIVCCLP 391 (392)
Confidence 1 13456677776678999999998873 579999998888999999999988764
No 68
>3ez1_A Aminotransferase MOCR family; YP_604413.1, struct genomics, joint center for structural genomics, JCSG; 2.60A {Deinococcus geothermalis dsm 11300}
Probab=100.00 E-value=4.5e-44 Score=342.39 Aligned_cols=352 Identities=18% Similarity=0.250 Sum_probs=280.1
Q ss_pred cCcceeEecccCCCCCCCCCCcHHHHHHHH--HHHhcC-CCCCC-CCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCC
Q 014936 33 NEKKVISLAMGDPTVHSCFHTTHVATEAVA--EALLSE-KFNGY-APTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSG 108 (415)
Q Consensus 33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~--~~~~~~-~~~~y-~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g 108 (415)
.....+||+.|.|+... ++.++.+.+++. +.+..+ ....| +++.|.++||+++|+++ ++++++|++|+|
T Consensus 23 ~~~~~i~l~~g~p~~~~-~~~~~~v~~a~~~~~~~~~~~~~~~Yp~~~~g~~~lr~~ia~~~------~~~~~~i~~t~G 95 (423)
T 3ez1_A 23 ARGLNLNMQRGQPADAD-FDLSNGLLTVLGAEDVRMDGLDLRNYPGGVAGLPSARALFAGYL------DVKAENVLVWNN 95 (423)
T ss_dssp HHTCCEESCCCCCCHHH-HHTTGGGGGSCCGGGCEETTEETTSSCSCTTCCHHHHHHHHHHT------TSCGGGEEECSS
T ss_pred cCCceEecCCCCCChHh-CCCcHHHHHHHhhhHHhhcchhhhCCCCCCCChHHHHHHHHHHh------CCChhhEEEeCC
Confidence 35568999999976321 456677888875 544422 34689 88889999999999998 578899999999
Q ss_pred hHHHHH--HHHHHhcC--C---------CCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhc--CCC
Q 014936 109 CTQAID--VAMALLSR--P---------GANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLA--DQN 173 (415)
Q Consensus 109 ~~~al~--~~~~~l~~--~---------gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~--~~~ 173 (415)
+++++. +++.++.+ + ||+|+++.|+|..+...++..|.+++.++.+.+ ++|++.|++++ .++
T Consensus 96 ~~~al~~~~~~~~l~~~~~g~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~---g~d~~~l~~~l~~~~~ 172 (423)
T 3ez1_A 96 SSLELQGLVLTFALLHGVRGSTGPWLSQTPKMIVTVPGYDRHFLLLQTLGFELLTVDMQSD---GPDVDAVERLAGTDPS 172 (423)
T ss_dssp CHHHHHHHHHHHHHHTCCTTCSSCGGGGCCEEEEEESCCHHHHHHHHHHTCEEEEEEEETT---EECHHHHHHHHHSCTT
T ss_pred cHHHHHHHHHHHHHhccCCCccccccCCCCEEEEcCCCcHHHHHHHHHcCCEEEeccCCCC---CCCHHHHHHHHhhCCC
Confidence 999998 88888877 7 599999999999999999999999999998643 48999999998 567
Q ss_pred ceEEEe-cCCCCccccCCCHHHHHHHHHHH-hhcCcEEEEccccCCcccCC-C--Cccccccc----CCCCCeEEEccCc
Q 014936 174 TVALVI-INPGNPCGNVYSYQHLQKLAETA-NKLKTLVIADEVYGHLVFGD-K--PFVPMGVF----GSTVPILTLGSLS 244 (415)
Q Consensus 174 ~~~v~i-~~p~nptG~~~~~~~l~~i~~~~-~~~~~~li~De~~~~~~~~~-~--~~~~~~~~----~~~~~~i~~~s~s 244 (415)
+++|++ ++|+||||.+++.+++++|+++| +++|+++|+||+|..+.+.+ . ...++..+ +..+++++++|||
T Consensus 173 ~~~v~~~~~~~NPtG~~~~~~~l~~l~~~a~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~s 252 (423)
T 3ez1_A 173 VKGILFVPTYSNPGGETISLEKARRLAGLQAAAPDFTIFADDAYRVHHLVEEDRAEPVNFVVLARDAGYPDRAFVFASTS 252 (423)
T ss_dssp EEEEEECSSSCTTTCCCCCHHHHHHHHTCCCSSTTCEEEEECTTSSCBCCSSSCCCCCCHHHHHHHHTCTTSEEEEEEST
T ss_pred ceEEEECCCCCCCCCcCCCHHHHHHHHHHHHhccCCEEEEECCcchhhcCCCCCCCCcchhhhhhccCCCCeEEEEeCch
Confidence 888864 48899999999999999999999 99999999999999766554 2 22233332 3456899999999
Q ss_pred cccCCCCceEEEEEeeCCCCCCChHHHHHHHHhhc-cccCCchhHHHHHHHHhhCC--Cc-HHHHHHHHHHHHHHHHHHH
Q 014936 245 KRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYF-DILGDPATFIQAAVPSILQQ--PD-EVFFKKTLNLLKQSVDICY 320 (415)
Q Consensus 245 K~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~a~~~~l~~--~~-~~~~~~~~~~~~~~~~~l~ 320 (415)
|. +++|+|+||+++++ ++++.+.... ..+.+++++.|.++..+++. .. ..++++.++.++++++.+.
T Consensus 253 K~-~~~G~r~G~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~ 323 (423)
T 3ez1_A 253 KI-TFAGAGLGFVASSE--------DNIRWLSKYLGAQSIGPNKVEQARHVKFLTEYPGGLEGLMRDHAAIIAPKFRAVD 323 (423)
T ss_dssp TT-SCSSSSCEEEEECH--------HHHHHHHHHHHHSCSCCCHHHHHHHHHHHHHSTTHHHHHHHHHHHHHHHHHHHHH
T ss_pred hh-ccCCcceEEEEeCH--------HHHHHHHHHHhhhccCCCHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHH
Confidence 98 79999999999865 6778777664 34567888999999988875 22 4677778888888888777
Q ss_pred HHhhc----CC-CCcCCCCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEc-CCCCCC-----CCeEEEEeeC
Q 014936 321 NKIKE----IP-CISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILP-GTAVGL-----KNWLRVTFAV 389 (415)
Q Consensus 321 ~~l~~----~~-~~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~-g~~~~~-----~~~iRi~~~~ 389 (415)
+.|.+ ++ ++. +..|.+|+|+|++++.. +... +..++.++||.+.| |..|+. ++++||+++.
T Consensus 324 ~~l~~~l~~~~~~~~-~~~p~~g~~~~~~~~~~------~~~~-~~~~l~~~gv~v~~~g~~~~~~~~~~~~~iRis~~~ 395 (423)
T 3ez1_A 324 EVLRAELGEGGEYAT-WTLPKGGYFISLDTAEP------VADR-VVKLAEAAGVSLTPAGATYPAGQDPHNRNLRLAPTR 395 (423)
T ss_dssp HHHHHHHTTTTSSEE-ECCCSBSSCEEEEESSS------CHHH-HHHHHHHTTEECCCTTTTSSTTCCSSSCEEEECCSS
T ss_pred HHHHHhcCcCCCceE-EeCCCccEEEEEECCCC------cHHH-HHHHHHHCCcEEecCcccccCCCCCCCCeEEEEcCC
Confidence 77754 42 255 44788999999998741 3444 45556788999999 666652 5899999974
Q ss_pred -ChhhHHHHHHHHHHHHHHHHHH
Q 014936 390 -DPYSLEECLDRIKSFYQRHAKQ 411 (415)
Q Consensus 390 -~~~~l~~~l~~l~~~~~~~~~~ 411 (415)
+++++++++++|++++++...+
T Consensus 396 ~~~~~i~~~~~~l~~~l~~~~~~ 418 (423)
T 3ez1_A 396 PPVEEVRTAMQVVAACIRLATEE 418 (423)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHH
Confidence 8999999999999999876653
No 69
>3f6t_A Aspartate aminotransferase; YP_194538.1, STRU genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: LLP; 2.15A {Lactobacillus acidophilus ncfm}
Probab=100.00 E-value=1.9e-43 Score=345.90 Aligned_cols=360 Identities=20% Similarity=0.292 Sum_probs=284.1
Q ss_pred ceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCC-CCCCcHHHHHHHHHHHhhh-CC-CCCC-CCcEEEeCChHH
Q 014936 36 KVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYA-PTAGLPLTRRAIAEYLSRD-LP-YKLT-PNDVFVTSGCTQ 111 (415)
Q Consensus 36 ~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~-~~~g~~~lr~~ia~~~~~~-~~-~~~~-~~~i~i~~g~~~ 111 (415)
.+++|+.|.|+ ++ ++.+++++.+.+... .|+ +..|.+++|+.+++++.+. .+ ..+. +++|++|+|+++
T Consensus 104 ~~i~l~~g~~~----~~-~~~~v~a~~~~~~~~---~y~~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~~i~~t~G~t~ 175 (533)
T 3f6t_A 104 DAVNYCHTELG----LN-RDKVVAEWVNGAVAN---NYPVPDRCLVNTEKIINYFLQELSYKDANLAEQTDLFPTEGGTA 175 (533)
T ss_dssp HHHHHHHHTTC----CC-HHHHHHHHHHHHHTC---SCCSSSSCCHHHHHHHHHHHHHHHTTTCCCGGGEEEEEEEHHHH
T ss_pred hheeccCCCCC----cC-CcHHHHHHHHHHHhC---CCCCCcccHHHHHHHHHHHHHHhcCCCCCCCCcceEEEECCHHH
Confidence 57899999865 33 566666666666532 444 6689999999999999765 33 3444 479999999999
Q ss_pred HHHHHHHH-----hcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccC--CCCCCCChhHHHhhcCCCceEEEecCCCC
Q 014936 112 AIDVAMAL-----LSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLP--DKGWEVDLDDIESLADQNTVALVIINPGN 184 (415)
Q Consensus 112 al~~~~~~-----l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~--~~~~~~~~~~l~~~~~~~~~~v~i~~p~n 184 (415)
++..++.+ ++++||+|+++.|+|.++...++..|.++..++++. ++++.+|+++|++++++++++|++++|+|
T Consensus 176 al~~~~~~l~~~~l~~~gd~Viv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~d~~~l~~~l~~~~k~v~l~~p~N 255 (533)
T 3f6t_A 176 AIVYAFHSLAENHLLKKGDKIAINEPIFTPYLRIPELKDYELVEVDLHSYEKNDWEIEPNEIEKLKDPSIKALIVVNPTN 255 (533)
T ss_dssp HHHHHHHHHHHTTSSCTTCEEEEESSCCHHHHTSGGGGGSEEEEECCCEETTTTSEECHHHHHHHSCTTEEEEEEESSCT
T ss_pred HHHHHHHHhhhhhccCCcCEEEEcCCCcHHHHHHHHHcCCeEEEEEecCCcccCCCCCHHHHHHHhCCCCeEEEEeCCCC
Confidence 99999998 789999999999999999999999999999998865 56688999999999998999999999999
Q ss_pred ccccCCCHHHHHHHHHHHh-hcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCC
Q 014936 185 PCGNVYSYQHLQKLAETAN-KLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPC 263 (415)
Q Consensus 185 ptG~~~~~~~l~~i~~~~~-~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~ 263 (415)
|||.+++.+++++|+++|+ ++|+++|+||+|+++.++.. ++.... .+++++++||||.|+++|+|+||+++++..
T Consensus 256 PtG~~~~~~~l~~l~~la~~~~~~~li~De~y~~~~~~~~---~~~~~~-~~~~i~~~S~SK~~g~~G~RiG~l~~~~~~ 331 (533)
T 3f6t_A 256 PTSKEFDTNALNAIKQAVEKNPKLMIISDEVYGAFVPNFK---SIYSVV-PYNTMLVYSYSKLFGCTGWRLGVIALNEKN 331 (533)
T ss_dssp TTCBCCCHHHHHHHHHHHHHCTTCEEEEECTTGGGSTTCC---CHHHHS-GGGEEEEEESHHHHTCGGGCEEEEEEESSC
T ss_pred CCccccCHHHHHHHHHHHHhCCCCEEEEcCCccccccCcc---CHhhcC-CCCEEEEecCcccCCCcccceEEEEECcHH
Confidence 9999999999999999999 68999999999998776432 232222 357899999999999999999999998642
Q ss_pred CCCChHHHHH--------------------------------HHHhh-ccccCCchhHHHHH----HHHhhC-----CCc
Q 014936 264 GMFRKPKVVE--------------------------------RMKKY-FDILGDPATFIQAA----VPSILQ-----QPD 301 (415)
Q Consensus 264 ~~~~~~~~~~--------------------------------~~~~~-~~~~~~~~~~~~~a----~~~~l~-----~~~ 301 (415)
... .+++ .++.. ...+.+++++.|.+ +..+|. ...
T Consensus 332 ~~~---~li~~l~~~~~~~~~~~~~~~~~~p~~~~~i~rl~~~~~~~~~~~~~~~~~~~q~a~a~~a~~~L~~~~g~~~~ 408 (533)
T 3f6t_A 332 VFD---DNIAHLDKVELRQLHKRYSSVVLDPDKMKFIDRLCADSRSIGLYHTAGLSTPQQIMEALFSMTHLLTSTNGGSD 408 (533)
T ss_dssp HHH---HHHHTSCHHHHHHHHHHHHTTCSCGGGCCHHHHHHHHHTTTTTGGGCSCCHHHHHHHHHHHHHHHTTCBGGGTB
T ss_pred HHH---HHHHhcchhhHHHHHhhhhccccCcchhhhHHHHHHHHHHHHHhcccCCChHHHHHHHHHHHHHHhhhccccch
Confidence 000 0211 11222 22345677778877 445564 234
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCccc-c-CC---------CCCHHHHHHHHHhhcCeE
Q 014936 302 EVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSL-L-DD---------IIDDIDFCFKLAKEESVI 370 (415)
Q Consensus 302 ~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~-~-~~---------~~~~~~~~~~ll~~~gi~ 370 (415)
..++++.++.++++++.+.+.|. + ++. +..|.+++|+|++++... . .+ ..++.+++..+++++||.
T Consensus 409 ~~~~~~~~~~~~~r~~~l~~~L~-~-~~~-~~~~~~g~~~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~ll~~~GV~ 485 (533)
T 3f6t_A 409 DPYIDIARKLVSERYDQLHDAMQ-A-PKD-ETDTNTHYYSLIDIYRLAEKIYGKEFRDYLTNNFEQVDFLLKLAEKNGVV 485 (533)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHT-C-CCC-CSTTBCCSEEEEEHHHHHHHHHCHHHHHHHHHHCCHHHHHHHHHHHTTSS
T ss_pred HHHHHHHHHHHHHHHHHHHHhcC-C-Ccc-ccCCCceEEEEEehHhhhhhccchHHHHHhhccCCHHHHHHHHHHhCCEE
Confidence 58899999999999999999997 6 566 457899999999885300 0 00 014567888888889999
Q ss_pred EEcCCCCCC-CCeEEEEee-CChhhHHHHHHHHHHHHHHHHHHhh
Q 014936 371 ILPGTAVGL-KNWLRVTFA-VDPYSLEECLDRIKSFYQRHAKQLQ 413 (415)
Q Consensus 371 v~~g~~~~~-~~~iRi~~~-~~~~~l~~~l~~l~~~~~~~~~~~~ 413 (415)
+.||+.|+. ++++|++++ .+++++++++++|.++++++.++.+
T Consensus 486 v~pg~~f~~~~~~iRls~a~~~~e~i~~~i~~L~~~l~~~~~~~~ 530 (533)
T 3f6t_A 486 LVDGVGFGAKPGELRVSQANLPTEDYALIGKQVLELLKEYYEEFK 530 (533)
T ss_dssp SCTTEEECSSTTEEEEESSSSCHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred EeCCcccCCCCCEEEEEEeeCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999886 689999997 6899999999999999998877643
No 70
>2q7w_A Aspartate aminotransferase; mechanism-based inhibitor, PLP, sadta, PH dependence; HET: KST PSZ PMP GOL; 1.40A {Escherichia coli} SCOP: c.67.1.1 PDB: 2qa3_A* 2qb2_A* 2qb3_A* 2qbt_A* 3qn6_A* 3pa9_A* 1aaw_A* 1amq_A* 1ams_A* 1arg_A* 1amr_A* 1art_A* 1asa_A* 1asd_A* 1ase_A* 1asl_A* 1asm_A* 1asn_A* 1c9c_A* 1cq6_A* ...
Probab=100.00 E-value=2.9e-43 Score=333.93 Aligned_cols=349 Identities=18% Similarity=0.176 Sum_probs=270.2
Q ss_pred CcceeEecccCC-CCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEE--eCChH
Q 014936 34 EKKVISLAMGDP-TVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFV--TSGCT 110 (415)
Q Consensus 34 ~~~~i~l~~g~~-~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i--~~g~~ 110 (415)
+++++||+.|.+ +.....++++.+++++.+.+.......|++..|..++|+++++++....+..+++++|++ |+|++
T Consensus 25 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~la~~~~~~~~~~~~~~~v~~~~~~g~~ 104 (396)
T 2q7w_A 25 RPGKINLGIGVYKDETGKTPVLTSVKKAEQYLLENETTKNYLGIDGIPEFGRCTQELLFGKGSALINDKRARTAQTPGGT 104 (396)
T ss_dssp ---CEESSCCSCCCTTSCCCCCHHHHHHHHHHHHHCCCCCCCCTTCCHHHHHHHHHHHHCTTCHHHHTTCEEEEEESHHH
T ss_pred CCCceecccccccCCCCCccCcHHHHHHHHhhcCcccccCCCCCCCCHHHHHHHHHHHhcCCCCccccccEEEEecccch
Confidence 467899999983 222224667999999988876544558988889999999999999653332245889998 99999
Q ss_pred HHHHHHHHHhc--CCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCC---CceEEEecCCCCc
Q 014936 111 QAIDVAMALLS--RPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ---NTVALVIINPGNP 185 (415)
Q Consensus 111 ~al~~~~~~l~--~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~---~~~~v~i~~p~np 185 (415)
+++++++.++. ++||+|+++.|+|+.+...++..|.++..++.++++++.+|++++++.+++ +++++++++|+||
T Consensus 105 ~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~v~~~~p~np 184 (396)
T 2q7w_A 105 GALRVAADFLAKNTSVKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHGCCHNP 184 (396)
T ss_dssp HHHHHHHHHHHHHSCCCEEEEEESCCTHHHHHHHHTTCEEEEEECEETTTTEECHHHHHHHHTTCCTTCEEEEECSSCTT
T ss_pred hhHHHHHHHHHHhCCCCEEEEcCCCchhHHHHHHHcCCceEEEecccCCCCCcCHHHHHHHHHhCCCCCEEEEeCCCCCC
Confidence 99999987763 699999999999999999999999999999886545678999999998864 3677888999999
Q ss_pred cccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCC-CCcccccccCC-CCCeEEEccCccccCCCCceEEEEEe--eC
Q 014936 186 CGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGD-KPFVPMGVFGS-TVPILTLGSLSKRWIVPGWRLGWFVT--TD 261 (415)
Q Consensus 186 tG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~-~~~~~~~~~~~-~~~~i~~~s~sK~~~~~G~r~G~~~~--~~ 261 (415)
||.+++.+++++|+++|+++|+++|+||+|..+.+++ ....++..+.. .+++++++|+||.|+++|+|+||+++ ++
T Consensus 185 tG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~riG~~~~~~~~ 264 (396)
T 2q7w_A 185 TGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARGLEEDAEGLRAFAAMHKELIVASSYSXNFGLYNERVGACTLVAAD 264 (396)
T ss_dssp TCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTSSSCHHHHTHHHHHHHHHCSCEEEEEECTTTTTCGGGCCEEEEEECSS
T ss_pred CCCCCCHHHHHHHHHHHHHCCCEEEEecccccccCCccchhHHHHHHHhcCCcEEEEEeccccccccccccceEEEEcCC
Confidence 9999999999999999999999999999999988753 12223333322 35789999999999989999999996 33
Q ss_pred CCCCCChHHHHHHHHhhc-cccCCchhHHHHHHHHhhCCCc-----HHHHHHHHHHHHHHHHHHHHHhhcCC---CCcCC
Q 014936 262 PCGMFRKPKVVERMKKYF-DILGDPATFIQAAVPSILQQPD-----EVFFKKTLNLLKQSVDICYNKIKEIP---CISCP 332 (415)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~a~~~~l~~~~-----~~~~~~~~~~~~~~~~~l~~~l~~~~---~~~~~ 332 (415)
+... .++.+.+.... ..+.+++++++.++.++|+... ++++++.+++++++++.+.+.|++++ ++. +
T Consensus 265 ~~~~---~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~-~ 340 (396)
T 2q7w_A 265 SETV---DRAFSQMKAAIRANYSNPPAHGASVVATILSNDALRAIWEQELTDMRQRIQRMRQLFVNTLQEKGANRDFS-F 340 (396)
T ss_dssp HHHH---HHHHHHHHHHHHTTTSSCCHHHHHHHHHHHTSHHHHHHHHHHHHHC-CHHHHHHHHHHHHHHHTTCCSCCT-H
T ss_pred HHHH---HHHHHHHHHHHhhccCCCCcHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcc-e
Confidence 1000 02444444322 2234568889999999997631 35778888999999999999999873 366 4
Q ss_pred CCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEeeC-ChhhHHHHHHHHHHH
Q 014936 333 HKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFAV-DPYSLEECLDRIKSF 404 (415)
Q Consensus 333 ~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~l~~~l~~l~~~ 404 (415)
..|.+|+|+|++++ . +++..+++++||.+.|| +||+++. +++++++++++|+++
T Consensus 341 ~~~~~~~~~~~~~~---------~-~~~~~~l~~~gv~v~~~--------~Ris~~~~~~e~i~~~~~~l~~~ 395 (396)
T 2q7w_A 341 IIKQNGMFSFSGLT---------K-EQVLRLREEFGVYAVAS--------GRVNVAGMTPDNMAPLCEAIVAV 395 (396)
T ss_dssp HHHCCSSEEECCCC---------H-HHHHHHHHHHCEECCTT--------CEEEGGGCCTTTHHHHHHHHHHH
T ss_pred ecCCCceEEEecCC---------H-HHHHHHHHhcCeeecCC--------ceEEEeecCHHHHHHHHHHHHhc
Confidence 46788999997653 2 45667777889999874 5999974 899999999999875
No 71
>2zy4_A L-aspartate beta-decarboxylase; pyridoxal 5'-phosphate, aminotransferase, lyase; HET: PLP; 2.00A {Alcaligenes faecalis subsp} PDB: 2zy3_A* 2zy5_A* 3fdd_A* 2zy2_A*
Probab=100.00 E-value=1.8e-42 Score=338.93 Aligned_cols=351 Identities=16% Similarity=0.258 Sum_probs=273.6
Q ss_pred eeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHh-hhCCCCC---CCCcEEEeCChHHH
Q 014936 37 VISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLS-RDLPYKL---TPNDVFVTSGCTQA 112 (415)
Q Consensus 37 ~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~-~~~~~~~---~~~~i~i~~g~~~a 112 (415)
+++|+.|.|. + +++.+.+++.+.+. ...|+++.|..++|+++++++. +..+.++ ++++|++|+|++++
T Consensus 106 ~i~l~~g~~~----~-~~~~~~~al~~~~~---~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~~~I~~t~G~~ea 177 (546)
T 2zy4_A 106 SLSYVRDQLG----L-DPAAFLHEMVDGIL---GCNYPVPPRMLNISEKIVRQYIIREMGADAIPSESVNLFAVEGGTAA 177 (546)
T ss_dssp HHHHHHHTSC----C-CHHHHHHHHHHHHH---TCSCCSSSSCCHHHHHHHHHHHHHHTTCTTSCGGGEEEEEEEHHHHH
T ss_pred hhecccCCCC----C-CChHHHHHHHHhhh---cCCCCCCcCCHHHHHHHHHHHHHHhccCCCCCCCcceEEEECCHHHH
Confidence 7899999864 3 34667777777664 2479998899999999887664 4443322 46899999999999
Q ss_pred HHHHHHH-----hcCCCCEEEEcCCCCcchHHHHHh--CCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCc
Q 014936 113 IDVAMAL-----LSRPGANILLPRPGFPIYELSAAF--RHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNP 185 (415)
Q Consensus 113 l~~~~~~-----l~~~gd~vi~~~p~y~~~~~~~~~--~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~np 185 (415)
+..++.+ ++++||+|++++|+|+.+...+.. .|++++.++.+++++|.+|++.|++.++++++++++++|+||
T Consensus 178 l~~~~~~l~~~~l~~~Gd~Vlv~~P~y~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~~~k~v~l~~p~NP 257 (546)
T 2zy4_A 178 MAYIFESLKLNGLLKAGDKVAIGMPVFTPYIEIPELAQYALEEVAINADPSLNWQYPDSELDKLKDPAIKIFFCVNPSNP 257 (546)
T ss_dssp HHHHHHHHHHTTSSCTTCEEEEEESCCHHHHHHHHSTTSCCEEEEEECBGGGTTBCCHHHHGGGGSTTEEEEEEESSCSS
T ss_pred HHHHHHHhhhhhcCCCCCEEEEeCCCCccHHHHHHHcCCCcEEEEEecCcccCCCCCHHHHHHhhCCCCeEEEEECCCCC
Confidence 9999988 578999999999999999987654 468888898877777889999999988888999999999999
Q ss_pred cccCCCHHHHHHHHHHH--hhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCC
Q 014936 186 CGNVYSYQHLQKLAETA--NKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPC 263 (415)
Q Consensus 186 tG~~~~~~~l~~i~~~~--~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~ 263 (415)
||.+++.+++++|+++| +++|+++|+||+|+.+.++ ..++.... .++++++.||||.|+++|+|+||++++++.
T Consensus 258 tG~~~~~~~l~~l~~~a~~~~~~~~ii~De~y~~~~~~---~~s~~~~~-~~~~i~~~S~SK~~g~~GlRiG~~~~~~~~ 333 (546)
T 2zy4_A 258 PSVKMDQRSLERVRNIVAEHRPDLMILTDDVYGTFADD---FQSLFAIC-PENTLLVYSFSKYFGATGWRLGVVAAHQQN 333 (546)
T ss_dssp SCBCCCHHHHHHHHHHHHHTCTTCEEEEECTTGGGSTT---CCCHHHHC-GGGEEEEEESTTTTTCGGGCEEEEEEESSC
T ss_pred CCccCCHHHHHHHHHHHHhccCCcEEEEeCcchhhccc---CcCHHHhC-CCCEEEEEeCccccCCCCcceEEEEECCHH
Confidence 99999999999999999 8899999999999988753 22333332 257899999999999999999999997631
Q ss_pred CCCChHHHHHHHHhh-------------------------------------ccccCCchhHHHHHH-----HHhhCCCc
Q 014936 264 GMFRKPKVVERMKKY-------------------------------------FDILGDPATFIQAAV-----PSILQQPD 301 (415)
Q Consensus 264 ~~~~~~~~~~~~~~~-------------------------------------~~~~~~~~~~~~~a~-----~~~l~~~~ 301 (415)
+++.+... ...+.+.+.+.|.++ .+++++ .
T Consensus 334 -------l~~~l~~~~p~~~~~~l~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~s~~~Q~a~a~~a~~all~~-~ 405 (546)
T 2zy4_A 334 -------VFDLALDKLQESEKVALDHRYRSLLPDVRSLKFIDRLVADSRAVALNHTAGLSTPQQVQMALFSLFALMDE-A 405 (546)
T ss_dssp -------HHHHHHHTSCHHHHHHHHHHHTTTCSCGGGCCHHHHHHHHTTTTTTGGGCSSCHHHHHHHHHHHHHHHHCT-T
T ss_pred -------HHHHHHhhcchhhhHHHHHHhhhccccccchhhhhhhhhhhHHHHhhccCCCCcHHHHHHHHHHHHHHHhc-c
Confidence 44444210 012245677777663 345553 2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCcc---ccC---------CCCCHHHHHHHHHhhcCe
Q 014936 302 EVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLS---LLD---------DIIDDIDFCFKLAKEESV 369 (415)
Q Consensus 302 ~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~---~~~---------~~~~~~~~~~~ll~~~gi 369 (415)
+.+.++.++.++++++.+.+.|. + ++. +..|.+++|+|++++.- ..+ +. ++.+++.+++.++||
T Consensus 406 ~~~~~~~r~~~~~r~~~l~~~L~-~-~~~-~~~~~~~~~l~~~l~~~~~~~~~~~~~~wl~~~~-~~~~~l~~ll~~~gV 481 (546)
T 2zy4_A 406 DEYKHTLKQLIRRRETTLYRELG-M-PPL-RDENAVDYYTLIDLQDVTAKLYGEAFSEWAVKQS-STGDMLFRIADETGI 481 (546)
T ss_dssp CHHHHHHHHHHHHHHHHHHGGGT-S-SCC-CCTTBCCSEEEEEHHHHHHHHHCHHHHHHHHHHC-CHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHHHHHHHHHhcC-C-Ccc-cCCCCeeEEEEEEHHHhhcccccHHHHHHhhccC-CHHHHHHHHHHHCCE
Confidence 47888999999999999999986 4 344 33678899999987520 000 01 345667778888999
Q ss_pred EEEcCCCCCC-CCeEEEEeeC-ChhhHHHHHHHHHHHHHHHHHH
Q 014936 370 IILPGTAVGL-KNWLRVTFAV-DPYSLEECLDRIKSFYQRHAKQ 411 (415)
Q Consensus 370 ~v~~g~~~~~-~~~iRi~~~~-~~~~l~~~l~~l~~~~~~~~~~ 411 (415)
.+.||..|+. ++++||+++. +++++++++++|+++++++.++
T Consensus 482 ~v~pG~~F~~~~~~iRis~~~~~~e~i~~~~~~l~~~l~~~~~~ 525 (546)
T 2zy4_A 482 VLLPGRGFGSNRPSGRASLANLNEYEYAAIGRALRKMADELYAE 525 (546)
T ss_dssp CCEESSCTTCSSCEEEEESSSSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEeCccccCCCCCeEEEEeccCCHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999976 5789999975 8899999999999998877654
No 72
>4eu1_A Mitochondrial aspartate aminotransferase; ssgcid, structural genomics, SEA structural genomics center for infectious disease; HET: LLP; 2.30A {Trypanosoma brucei}
Probab=100.00 E-value=2.8e-43 Score=335.40 Aligned_cols=363 Identities=17% Similarity=0.161 Sum_probs=270.5
Q ss_pred cCCccCCcchhhHHHHHHHhhhcccccccCcceeEecccCC-CCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHH
Q 014936 5 NGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDP-TVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTR 83 (415)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~-~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr 83 (415)
.+....+++ ++......+.++. .++++||+.|+| + ++.++.+.+++.++.. .....|++..|.+++|
T Consensus 18 ~~~~~~~~~--~i~~~~~~~~~~~-----~~~~i~l~~g~~~d----~~~~~~v~~a~~~a~~-~~~~~y~~~~g~~~lr 85 (409)
T 4eu1_A 18 GPGSMGKPD--PILGLGQDFRMDP-----AKRKVNLSIGVYRD----DADQPFVLECVKQATL-GTNMDYAPVTGIASFV 85 (409)
T ss_dssp -----------CHHHHHHHHHHCC-----CSSCEECCCSSCCC----TTSCCCCCHHHHTCCC-CSCCCCCCTTCCHHHH
T ss_pred hcCCCCCCC--hHHHHHHHHhhCC-----CcCceeeeeeEEEC----CCCCEeecHHHHhcCc-cccccCCCCCCcHHHH
Confidence 344445555 4555555444443 467899999996 4 3344455666665532 3446898889999999
Q ss_pred HHHHHHHhhhCCCCCCCCcEE--EeCChHHHHHHHH---HHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCC
Q 014936 84 RAIAEYLSRDLPYKLTPNDVF--VTSGCTQAIDVAM---ALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKG 158 (415)
Q Consensus 84 ~~ia~~~~~~~~~~~~~~~i~--i~~g~~~al~~~~---~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~ 158 (415)
+++++++....+..+++++|. .+.|+++++..+. .++.++||+|+++.|+|..+...++..|.+++.++...+++
T Consensus 86 ~~ia~~~~~~~~~~~~~~~i~~~~~~~g~ga~~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~ 165 (409)
T 4eu1_A 86 EEAQKLCFGPTCAALRDGRIASCQTLGGTGALRIGGDLLNRFVANCNRIYGPDVGYPNHESIFAKAGMELTPYSYYDPAT 165 (409)
T ss_dssp HHHHHHHHCSSCHHHHTTCEEEEEESHHHHHHHHHHHHGGGTSSSCCEEEEESSCCTHHHHHHHHTTCEEEEECCEETTT
T ss_pred HHHHHHHcCCCchhhccCceeeeecccchHHHHHHHHHHHHhcCCCCEEEEeCCCcHhHHHHHHHcCCeEEEEEeecCcC
Confidence 999999842111112267884 5999999988754 44568999999999999999999999999999999865567
Q ss_pred CCCChhHHHhhcC---CCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCC--Cccccccc-C
Q 014936 159 WEVDLDDIESLAD---QNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDK--PFVPMGVF-G 232 (415)
Q Consensus 159 ~~~~~~~l~~~~~---~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~--~~~~~~~~-~ 232 (415)
+.+|++++++.++ +.++++++++||||||.+++.+++++|+++|+++|+++|+||+|.++.+++. ...++..+ +
T Consensus 166 ~~~d~~~l~~~l~~~~~~~~~i~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~ 245 (409)
T 4eu1_A 166 KGLNLAGMLECLDKAPEGSVILVHACAHNPTGVDPTHDDWRQVCDVIKRRNHIPFVDMAYQGFATGQLDYDAFVPRHLVD 245 (409)
T ss_dssp TEECHHHHHHHHHHSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTTTSCHHHHTHHHHHHHT
T ss_pred CcCcHHHHHHHHHhCCCCcEEEEECCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEeccccccccCCcccchHHHHHHHh
Confidence 8899999999885 3456667799999999999999999999999999999999999999887652 11222222 3
Q ss_pred CCCCeEEEccCccccCCCCceEEEE--EeeCCCCCCChHH----HHHHHHhhc-cccCCchhHHHHHHHHhhCCCc----
Q 014936 233 STVPILTLGSLSKRWIVPGWRLGWF--VTTDPCGMFRKPK----VVERMKKYF-DILGDPATFIQAAVPSILQQPD---- 301 (415)
Q Consensus 233 ~~~~~i~~~s~sK~~~~~G~r~G~~--~~~~~~~~~~~~~----~~~~~~~~~-~~~~~~~~~~~~a~~~~l~~~~---- 301 (415)
..+++++++||||.|+++|+|+||+ ++++ ++ +.+.++... ..+.+++++.|.++..+|+...
T Consensus 246 ~~~~~i~~~S~SK~~g~~G~riG~~~~v~~~-------~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 318 (409)
T 4eu1_A 246 MVPNLIVAQSFSKNFGLYGHRCGALHISTAS-------AEEAKRLVSQLALLIRPMYNNPPLYGAWVVSSILKDPQLTAL 318 (409)
T ss_dssp TSSCCEEEEECTTTSSCGGGCCEEEEEECSS-------HHHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHCHHHHHH
T ss_pred hCCcEEEEecCcccccCccCCceEEEEEeCC-------HHHHHHHHHHHHHHHhhhcCCCChHHHHHHHHHhCCHHHHHH
Confidence 4567899999999999999999997 5544 24 555555542 3345677889999998887632
Q ss_pred -HHHHHHHHHHHHHHHHHHHHHhhcCC--C-CcCCCCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCC
Q 014936 302 -EVFFKKTLNLLKQSVDICYNKIKEIP--C-ISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAV 377 (415)
Q Consensus 302 -~~~~~~~~~~~~~~~~~l~~~l~~~~--~-~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~ 377 (415)
.+++++.+++++++++.+.+.|++++ + +. +..|.+|+|+|+.++ .+++..+++++||.+.||
T Consensus 319 ~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~-~~~~~~~~~~~~~~~----------~~~~~~ll~~~gv~v~p~--- 384 (409)
T 4eu1_A 319 WKKELKQMSSRIAEVRKRLVSELKACGSVHDWS-HIERQVGMMAYTGLT----------REQVELLRSEYHIYMTLN--- 384 (409)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTCCSCCH-HHHHSCSSEEECCCC----------HHHHHHHHHHHCEECCTT---
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcc-eecCCceEEEEeCCC----------HHHHHHHHHcCCEEEcCC---
Confidence 34577888999999999999999872 1 55 446889999996553 355778888889999986
Q ss_pred CCCCeEEEEee-CChhhHHHHHHHHHHHH
Q 014936 378 GLKNWLRVTFA-VDPYSLEECLDRIKSFY 405 (415)
Q Consensus 378 ~~~~~iRi~~~-~~~~~l~~~l~~l~~~~ 405 (415)
.||+++ .++++++.++++|++++
T Consensus 385 -----~Ri~~~~~~~~~i~~~~~~l~~~l 408 (409)
T 4eu1_A 385 -----GRAAVSGLNSTNVEYVSQAIHNVT 408 (409)
T ss_dssp -----CEEEGGGCCTTTHHHHHHHHHHHH
T ss_pred -----CEEEEEecCHhhHHHHHHHHHHHh
Confidence 399995 67888999999998765
No 73
>3cq5_A Histidinol-phosphate aminotransferase; PLP, PMP, amino-acid biosynthesis, histidine biosynthesis, pyridoxal phosphate; HET: PMP; 1.80A {Corynebacterium glutamicum} PDB: 3cq6_A* 3cq4_A
Probab=100.00 E-value=2.6e-41 Score=317.36 Aligned_cols=331 Identities=18% Similarity=0.232 Sum_probs=273.7
Q ss_pred eeEecccCCCCCCCCCCcHHHHHHHHHHHhcC--CCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHH
Q 014936 37 VISLAMGDPTVHSCFHTTHVATEAVAEALLSE--KFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAID 114 (415)
Q Consensus 37 ~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~--~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~ 114 (415)
.+||+.|.+. +++++.+.+++.+.+... ....|++..+ .++|+++++++++.+|.++++++|++|+|+++++.
T Consensus 32 ~idl~~~~~~----~~~~~~v~~a~~~~~~~~~~~~~~y~~~~~-~~l~~~la~~l~~~~g~~~~~~~v~~~~G~~~al~ 106 (369)
T 3cq5_A 32 DIRLNTNENP----YPPSEALVADLVATVDKIATELNRYPERDA-VELRDELAAYITKQTGVAVTRDNLWAANGSNEILQ 106 (369)
T ss_dssp SEECSSCCCC----SCCCHHHHHHHHHHHHHHGGGTTSCCCTTC-HHHHHHHHHHHHHHHCCCCCGGGEEEESHHHHHHH
T ss_pred ceeccCCCCC----CCCCHHHHHHHHHHHHhcccccccCCCccH-HHHHHHHHHhhhhcccCCCChHhEEECCChHHHHH
Confidence 4899999863 667899999999887642 2457877655 89999999999888887888999999999999999
Q ss_pred HHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCC-CceEEEecCCCCccccCCCHH
Q 014936 115 VAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ-NTVALVIINPGNPCGNVYSYQ 193 (415)
Q Consensus 115 ~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~v~i~~p~nptG~~~~~~ 193 (415)
.++.++.++||+|+++.|+|+++...++..|.++..++.+ +++.+|++++++.+++ +++++++++|+||||.++|.+
T Consensus 107 ~~~~~l~~~gd~Vl~~~~~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~~~ 184 (369)
T 3cq5_A 107 QLLQAFGGPGRTALGFQPSYSMHPILAKGTHTEFIAVSRG--ADFRIDMDVALEEIRAKQPDIVFVTTPNNPTGDVTSLD 184 (369)
T ss_dssp HHHHHHCSTTCEEEEEESSCTHHHHHHHHTTCEEEEEECC--TTSSCCHHHHHHHHHHHCCSEEEEESSCTTTCCCCCHH
T ss_pred HHHHHhcCCCCEEEEcCCChHHHHHHHHHcCCEEEEecCC--cCCCCCHHHHHHHhhccCCCEEEEeCCCCCCCCCCCHH
Confidence 9999999999999999999999999999999999999864 4467899999998876 788999999999999999988
Q ss_pred HHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCC-CeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHH
Q 014936 194 HLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTV-PILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVV 272 (415)
Q Consensus 194 ~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~-~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~ 272 (415)
++.+|++.| ++++|+||+|+.+.++ ...+...+..+ +++++.|+||.++++|+|+||+++++ +++
T Consensus 185 ~l~~l~~~~---~~~li~De~~~~~~~~---~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~--------~~~ 250 (369)
T 3cq5_A 185 DVERIINVA---PGIVIVDEAYAEFSPS---PSATTLLEKYPTKLVVSRTMSKAFDFAGGRLGYFVANP--------AFI 250 (369)
T ss_dssp HHHHHHHHC---SSEEEEECTTGGGCCS---CCGGGGTTTCTTTEEEEEESSSTTSCGGGCCEEEEECT--------HHH
T ss_pred HHHHHHHhC---CCEEEEECCchhhcCC---cchHHHHhhCCCCEEEEEechHhcCCcccceEEEEeCH--------HHH
Confidence 888888765 4999999999987753 11122223334 78999999999988999999999975 677
Q ss_pred HHHHhhccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCccccCC
Q 014936 273 ERMKKYFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLDD 352 (415)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~~~ 352 (415)
+.+..... .++++++.+.++.++|+. .+++++.+++++++++.+.+.|++. ++. + .|..|+|+|++++.
T Consensus 251 ~~l~~~~~-~~~~~~~~~~a~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~-~~~~~~~~~~~~~~----- 319 (369)
T 3cq5_A 251 DAVMLVRL-PYHLSALSQAAAIVALRH--SADTLGTVEKLSVERVRVAARLEEL-GYA-V-VPSESNFVFFGDFS----- 319 (369)
T ss_dssp HHHHTTSC-TTCSCHHHHHHHHHHHHT--HHHHHTHHHHHHHHHHHHHHHHHHH-TCE-E-ECCSSSEEEEECCS-----
T ss_pred HHHHHcCC-CCCCCHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHHHHhC-CCE-E-CCCCCeEEEEECCC-----
Confidence 87776544 356888999999999975 4678889999999999999999885 777 4 36667889988751
Q ss_pred CCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEeeCChhhHHHHHHHHHHHHH
Q 014936 353 IIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFAVDPYSLEECLDRIKSFYQ 406 (415)
Q Consensus 353 ~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~~~l~~~l~~l~~~~~ 406 (415)
+..++...+ .++||.+.|| +.++++|++++ ++++++.+++.|+++++
T Consensus 320 --~~~~l~~~l-~~~gi~v~~~---~~~~~iRis~~-~~~~i~~~~~~l~~~~~ 366 (369)
T 3cq5_A 320 --DQHAAWQAF-LDRGVLIRDV---GIAGHLRTTIG-VPEENDAFLDAAAEIIK 366 (369)
T ss_dssp --SHHHHHHHH-HHTTEECBCC---SCTTEEEEECC-CHHHHHHHHHHHHHHHT
T ss_pred --CHHHHHHHH-HHCCEEEEEC---CCCCeEEEEeC-CHHHHHHHHHHHHHHHh
Confidence 456676666 5779999998 33689999998 78899999999988764
No 74
>3fkd_A L-threonine-O-3-phosphate decarboxylase; structural genomic, , structural genomics, PSI-2, protein structure initiative; 2.50A {Porphyromonas gingivalis}
Probab=100.00 E-value=5.8e-42 Score=319.54 Aligned_cols=326 Identities=16% Similarity=0.219 Sum_probs=263.0
Q ss_pred cCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHH
Q 014936 33 NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQA 112 (415)
Q Consensus 33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~a 112 (415)
.+++++||+.|.+. +++++.+++++.+.+. ....|+++.+ .++|+++|+++ ++++++|++|+|++++
T Consensus 13 ~g~~~id~~~~~~~----~~~~~~v~~a~~~~~~--~~~~y~~~~~-~~lr~~la~~~------~~~~~~i~~t~g~~~a 79 (350)
T 3fkd_A 13 LSSEIVNFSTTVWT----DGDKDHLEKHLVENLN--CIRHYPEPDA-GTLRQMLAKRN------SVDNNAILVTNGPTAA 79 (350)
T ss_dssp ---CCEECSCCSCC----CSCCHHHHHHHHHTGG--GGGSCCCTTC-HHHHHHHHHHT------TCCGGGEEEESHHHHH
T ss_pred ccccEEEccCCCCC----CCCCHHHHHHHHHhHh--HHhcCCCCcH-HHHHHHHHHHh------CcCHHHEEEcCCHHHH
Confidence 36889999999864 6678999999998873 3457888766 89999999998 5688999999999999
Q ss_pred HHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeec-cCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCC
Q 014936 113 IDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDL-LPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYS 191 (415)
Q Consensus 113 l~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~ 191 (415)
+.+++.++. ||+|+++.|+|..+...++..|++++.++. +..++ +++ ++++++++++|+||||.+++
T Consensus 80 l~~~~~~l~--gd~Vi~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~--~~~--------~~~~~v~i~~p~nptG~~~~ 147 (350)
T 3fkd_A 80 FYQIAQAFR--GSRSLIAIPSFAEYEDACRMYEHEVCFYPSNEDIGE--ADF--------SNMDFCWLCNPNNPDGRLLQ 147 (350)
T ss_dssp HHHHHHHTT--TCEEEEEESCCHHHHHHHHHTTCEEEEEETTSCGGG--SCC--------TTCSEEEEESSCTTTCCCCC
T ss_pred HHHHHHHHC--CCEEEEeCCCcHHHHHHHHHcCCeEEEEecCCcccc--Ccc--------CCCCEEEEeCCCCCcCCCCC
Confidence 999999997 999999999999999999999999999987 43233 333 47889999999999999999
Q ss_pred HHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHH
Q 014936 192 YQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKV 271 (415)
Q Consensus 192 ~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~ 271 (415)
.+++.+|+++|+++ ++|+||+|+.+.+.+... ...++..+++++++|+||.++++|+|+||+++++ ++
T Consensus 148 ~~~l~~l~~~~~~~--~li~Dea~~~~~~~~~~~--~~~~~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~--------~~ 215 (350)
T 3fkd_A 148 RTEILRLLNDHPDT--TFVLDQSYVSFTTEEVIR--PADIKGRKNLVMVYSFSHAYGIPGLRIGYIVANK--------DF 215 (350)
T ss_dssp HHHHHHHHHHCTTS--EEEEECTTTTSCSSCCCC--GGGGTTCSSEEEEEESHHHHSCGGGCCEEEECCH--------HH
T ss_pred HHHHHHHHHhCCCC--EEEEECchhhhccCcchh--hHHhhcCCCEEEEecCchhccCcchheEeEEeCH--------HH
Confidence 99999999999865 999999999987665432 2344556788999999999999999999999854 68
Q ss_pred HHHHHhhccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCccccC
Q 014936 272 VERMKKYFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLD 351 (415)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~~ 351 (415)
++.+..... .++++++.+.++..+|+... .+.++..+.. ++++.+.+.|+++|++. + .|..+.|+|++++..
T Consensus 216 ~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~-~~~~~l~~~L~~~~~~~-~-~~~~~~~~~~~~~~~--- 287 (350)
T 3fkd_A 216 MKRVAAFST-PWAVNALAIEAAKFILIHPA-QFTLPIRKWQ-RNTVDFITALNRLDGVE-V-HPSGTTFFLLRLKKG--- 287 (350)
T ss_dssp HHHHHTTCC-TTCSCHHHHHHHHHHHHCTT-TTCCCHHHHH-HHHHHHHHHHHHSTTEE-E-CCCSSSEEEEEESSS---
T ss_pred HHHHHHhCC-CCCCCHHHHHHHHHHHhCHH-HHHHHHHHHH-HHHHHHHHHHhcCCCcE-E-CCCCCcEEEEECCCC---
Confidence 888877654 46788999999999987642 2333343333 88889999999888888 4 566788888888741
Q ss_pred CCCCHHHHHHHHHhhcCeEEEcCCCCCC--CCeEEEEeeCChhhHHHHHHHHHHHHHH
Q 014936 352 DIIDDIDFCFKLAKEESVIILPGTAVGL--KNWLRVTFAVDPYSLEECLDRIKSFYQR 407 (415)
Q Consensus 352 ~~~~~~~~~~~ll~~~gi~v~~g~~~~~--~~~iRi~~~~~~~~l~~~l~~l~~~~~~ 407 (415)
+..++...+++++||.+.||..|+. ++++||+++ ++++++.+++.|+++.++
T Consensus 288 ---~~~~l~~~L~~~~gi~v~~g~~f~~~~~~~iRis~~-~~~~~~~l~~al~~~~~~ 341 (350)
T 3fkd_A 288 ---TAAELKKYMLEEYNMLIRDASNFRGLDESYVRITTQ-RPAQNQLFIKALETFLEK 341 (350)
T ss_dssp ---CHHHHHHHHHHTTCEECEECTTSTTCCTTEEEEECC-CHHHHHHHHHHHHHHHTC
T ss_pred ---CHHHHHHHHHHHCCEEEEeCccCCCCCCCEEEEEcC-CHHHHHHHHHHHHHHHHH
Confidence 4677888776658999999998875 689999997 566777777777776654
No 75
>2ay1_A Aroat, aromatic amino acid aminotransferase; HET: PLP AHC; 2.20A {Paracoccus denitrificans} SCOP: c.67.1.1 PDB: 1ay5_A* 1ay4_A* 1ay8_A* 2ay2_A* 2ay3_A* 2ay4_A* 2ay5_A* 2ay6_A* 2ay7_A* 2ay8_A* 2ay9_A*
Probab=100.00 E-value=2.3e-42 Score=327.49 Aligned_cols=365 Identities=15% Similarity=0.157 Sum_probs=277.2
Q ss_pred ccCCcchhhHHHHHHHhhhcccccccCcceeEecccCCC-CCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHH
Q 014936 8 IDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPT-VHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAI 86 (415)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~-~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~i 86 (415)
...+++ .+........+.. +++++||+.|.+. .....++++.+++++.+.+.......|++..|..++|+++
T Consensus 6 ~~~~~~--~~~~~~~~~~~~~-----~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~l 78 (394)
T 2ay1_A 6 KPQAPD--KILALMGEFRADP-----RQGKIDLGVGVYKDATGHTPIMRAVHAAEQRMLETETTKTYAGLSGEPEFQKAM 78 (394)
T ss_dssp CCCCCC--SHHHHHHHHHHCC-----CTTCEECCCCSCCCTTSCCCCCHHHHHHHHHHHHHCCCCCCCCSSCCHHHHHHH
T ss_pred ccCCCc--cHHHHHHHHHhCC-----CccccccccceeeCCCCCccCcHHHHHHHHHhcCCcccCCCCCCCCcHHHHHHH
Confidence 344455 5555555444332 5678999999852 1222467899999999887654456898888999999999
Q ss_pred HHHHhhhCCCCCCCCcEEE--eCChHHHHHHHHHHhcC--CCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCC
Q 014936 87 AEYLSRDLPYKLTPNDVFV--TSGCTQAIDVAMALLSR--PGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVD 162 (415)
Q Consensus 87 a~~~~~~~~~~~~~~~i~i--~~g~~~al~~~~~~l~~--~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 162 (415)
++++.. .++++++|++ |+|+++++++++.++.. +||+|+++.|+|+.+...++..|.++..++.++++++.+|
T Consensus 79 a~~~~~---~~~~~~~v~~~~~~g~~~a~~~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d 155 (394)
T 2ay1_A 79 GELILG---DGLKSETTATLATVGGTGALRQALELARMANPDLRVFVSDPTWPNHVSIMNFMGLPVQTYRYFDAETRGVD 155 (394)
T ss_dssp HHHHHG---GGCCGGGEEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEESCCHHHHHHHHHHTCCEEEEECEETTTTEEC
T ss_pred HHHHhC---CCCCcccEEEEecCCchhHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHcCCceEEEecccccCCccC
Confidence 999842 1236789999 99999999999988754 8999999999999999999999999999988654567899
Q ss_pred hhHHHhhcCC---CceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCC-CcccccccC-CCCCe
Q 014936 163 LDDIESLADQ---NTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDK-PFVPMGVFG-STVPI 237 (415)
Q Consensus 163 ~~~l~~~~~~---~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~-~~~~~~~~~-~~~~~ 237 (415)
++++++.+++ .++++++++|+||||.++|.+++++|+++|+++|+++|+||+|+++.+++. ...++..+. ..+++
T Consensus 156 ~~~l~~~l~~~~~~~~~~~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (394)
T 2ay1_A 156 FEGMKADLAAAKKGDMVLLHGCCHNPTGANLTLDQWAEIASILEKTGALPLIDLAYQGFGDGLEEDAAGTRLIASRIPEV 235 (394)
T ss_dssp HHHHHHHHHTCCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEECCTTSSSCHHHHHHHHHHHHHHCSSE
T ss_pred HHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEecCccccccCcccchHHHHHHhhcCCCE
Confidence 9999998864 356777899999999999999999999999999999999999999876531 112232222 13468
Q ss_pred EEEccCccccCCCCceEEEEEe--eCCCCCCChHHHHHHHHhh-ccccCCchhHHHHHHHHhhCCCc-----HHHHHHHH
Q 014936 238 LTLGSLSKRWIVPGWRLGWFVT--TDPCGMFRKPKVVERMKKY-FDILGDPATFIQAAVPSILQQPD-----EVFFKKTL 309 (415)
Q Consensus 238 i~~~s~sK~~~~~G~r~G~~~~--~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~a~~~~l~~~~-----~~~~~~~~ 309 (415)
++++|+||.|+++|+|+||+++ +++..+ ..+.+.+... ...+.+++++.+.++.++|+... .+++++.+
T Consensus 236 i~~~s~sK~~~~~G~riG~~~~~~~~~~~~---~~l~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~l~~~~~~~~~~~~ 312 (394)
T 2ay1_A 236 LIAASCSKNFGIYRERTGCLLALCADAATR---ELAQGAMAFLNRQTYSFPPFHGAKIVSTVLTTPELRADWMAELEAVR 312 (394)
T ss_dssp EEEEECTTTTTCGGGCEEEEEEECSSHHHH---HHHHHHHHHHHHTTTSSCCCHHHHHHHHHHHSHHHHHHHHHHHHHHH
T ss_pred EEEEeccCCCcCcCCccceEEEEeCCHHHH---HHHHHHHHHHHhhhcCCCChHHHHHHHHHhcChHHHHHHHHHHHHHH
Confidence 9999999999889999999997 331100 0123333322 12234458889999999887631 35788889
Q ss_pred HHHHHHHHHHHHHhhcCC---CCcCCCCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEE
Q 014936 310 NLLKQSVDICYNKIKEIP---CISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVT 386 (415)
Q Consensus 310 ~~~~~~~~~l~~~l~~~~---~~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~ 386 (415)
++++++++.+.+.|++++ ++. +..|.+|+|+|++++ . +.+..+++++||.+.|| +||+
T Consensus 313 ~~~~~~~~~l~~~L~~~~~~~~~~-~~~~~~g~~~~~~~~---------~-~~~~~~l~~~gi~v~~~--------~Ris 373 (394)
T 2ay1_A 313 SGMLRLREQLAGELRDLSGSDRFG-FVAEHRGMFSRLGAT---------P-EQVKRIKEEFGIYMVGD--------SRIN 373 (394)
T ss_dssp HHHHHHHHHHHHHHHHHHTSSTTT-HHHHCCSSEEECCCC---------H-HHHHHHHHHHCEECCTT--------CEEE
T ss_pred HHHHHHHHHHHHHHHhcCCCCCee-EEcCCceEEEeeCCC---------H-HHHHHHHHhCCEEecCC--------CeEE
Confidence 999999999999998763 366 436788999997663 2 34566777889999874 5999
Q ss_pred ee-CChhhHHHHHHHHHHH
Q 014936 387 FA-VDPYSLEECLDRIKSF 404 (415)
Q Consensus 387 ~~-~~~~~l~~~l~~l~~~ 404 (415)
++ .+++++++++++|+++
T Consensus 374 ~~~~~~~~i~~~~~~l~~~ 392 (394)
T 2ay1_A 374 IAGLNDNTIPILARAIIEV 392 (394)
T ss_dssp GGGCCTTTHHHHHHHHHHH
T ss_pred eecCCHhhHHHHHHHHHHc
Confidence 96 5899999999999875
No 76
>3p1t_A Putative histidinol-phosphate aminotransferase; PLP-dependent transferase-like, structural genomics, joint C structural genomics, JCSG; HET: TLA; 2.60A {Burkholderia pseudomallei}
Probab=100.00 E-value=1.7e-40 Score=308.00 Aligned_cols=321 Identities=17% Similarity=0.229 Sum_probs=260.5
Q ss_pred cCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHH
Q 014936 33 NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQA 112 (415)
Q Consensus 33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~a 112 (415)
..+.+|+|+.+.+. +++++.+++++.+.+.. ...|++ .+..++|+++|+++ ++++++|++|+|++++
T Consensus 14 ~~~~~i~l~~n~~~----~~~~~~v~~a~~~~~~~--~~~y~~-~~~~~lr~~la~~~------~~~~~~i~~t~G~~~~ 80 (337)
T 3p1t_A 14 AAAQAVCLAFNENP----EAVEPRVQAAIAAAAAR--INRYPF-DAEPRVMRKLAEHF------SCPEDNLMLVRGIDEC 80 (337)
T ss_dssp CCCCCEECSSCCCC----SCCCHHHHHHHHHHGGG--TTSCCT-THHHHHHHHHHHHH------TSCGGGEEEESHHHHH
T ss_pred CCCCceEeeCCCCC----CCCCHHHHHHHHHhhhh--hccCCC-CchHHHHHHHHHHh------CcCHHHEEEeCCHHHH
Confidence 46678999999743 67889999999998764 457865 68999999999998 5678899999999999
Q ss_pred HHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCH
Q 014936 113 IDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSY 192 (415)
Q Consensus 113 l~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~ 192 (415)
+.+++.++ +||+|+++.|+|..+...++..|++++.++.+ .++.+|++++++. .+++++++++|+||||.++|.
T Consensus 81 l~~~~~~~--~gd~vl~~~p~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~--~~~~~v~i~~p~nptG~~~~~ 154 (337)
T 3p1t_A 81 FDRISAEF--SSMRFVTAWPGFDGYRARIAVSGLRHFEIGLT--DDLLLDPNDLAQV--SRDDCVVLANPSNPTGQALSA 154 (337)
T ss_dssp HHHHHHHS--TTSEEEEESSSCSHHHHHHTTSCCEEEEECBC--TTSSBCHHHHTTC--CTTEEEEEESSCTTTCCCCCH
T ss_pred HHHHHHhc--CCCeEEEeCCCcHHHHHHHHHcCCEEEEecCC--CCCCCCHHHHHhh--cCCCEEEEeCCCCCCCCCCCH
Confidence 99999988 89999999999999999999999999999875 3567999999987 467899999999999999998
Q ss_pred HHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHH
Q 014936 193 QHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVV 272 (415)
Q Consensus 193 ~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~ 272 (415)
+++.+|++ .+++ +|+||+|+.+...+.. . ....+++++++|+||.|+++|+|+||+++++ +++
T Consensus 155 ~~l~~l~~---~~~~-~ivDea~~~~~~~~~~--~---~~~~~~~i~~~S~sK~~g~~G~r~G~~~~~~--------~~~ 217 (337)
T 3p1t_A 155 GELDQLRQ---RAGK-LLIDETYVDYSSFRAR--G---LAYGENELVFRSFSKSYGLAGLRLGALFGPS--------ELI 217 (337)
T ss_dssp HHHHHHHH---HCSE-EEEECTTGGGSSCSSS--C---CCCBTTEEEEEESSSTTCCTTTCCEEEECCH--------HHH
T ss_pred HHHHHHHH---hCCc-EEEECCChhhcccccc--c---cccCCCEEEEeeCchhccCcchheEEEEeCH--------HHH
Confidence 88777765 5665 6669999986643321 1 2234568999999999999999999999865 677
Q ss_pred HHHHhhccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCccccCC
Q 014936 273 ERMKKYFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLDD 352 (415)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~~~ 352 (415)
+.+..... .++.+++.+.++..+|+. ..++++..+++.++++.+.+.|+++ ++. + .+..+.|+|+..+
T Consensus 218 ~~l~~~~~-~~~~~~~~~~a~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~-~~~~~~~~~~~~~------ 285 (337)
T 3p1t_A 218 AAMKRKQW-FCNVGTLDLHALEAALDN--DRAREAHIAKTLAQRRRVADALRGL-GYR-V-ASSEANFVLVENA------ 285 (337)
T ss_dssp HHHHTTSC-TTCSCHHHHHHHHHHHTC--HHHHHHHHHHHHHHHHHHHHHHHHT-TCC-B-CCCSSSEEEEECT------
T ss_pred HHHHhhcC-CCCCCHHHHHHHHHHhCC--HHHHHHHHHHHHHHHHHHHHHHHHC-cCE-E-CCCCCeEEEEEcC------
Confidence 87776543 467788899999999975 3456777788888899999999988 777 4 3445567776664
Q ss_pred CCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEeeCChhhHHHHHHHHHHHH
Q 014936 353 IIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFAVDPYSLEECLDRIKSFY 405 (415)
Q Consensus 353 ~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~~~l~~~l~~l~~~~ 405 (415)
+..++ ..+|.++||.+.||..|+.++++||+++ ++++++.+++.|+++.
T Consensus 286 --~~~~~-~~~l~~~gi~v~~g~~~~~~~~iRis~~-~~~~~~~l~~al~~~~ 334 (337)
T 3p1t_A 286 --AGERT-LRFLRERGIQVKDAGQFGLHHHIRISIG-REEDNDRLLAALAEYS 334 (337)
T ss_dssp --TTHHH-HHHHHHTTEECEEGGGGTCCSEEEEECC-CHHHHHHHHHHHHHHT
T ss_pred --CHHHH-HHHHHHCCeEEEECccCCCCCeEEEecC-CHHHHHHHHHHHHHHh
Confidence 23344 4455778999999999988899999998 5788888888887764
No 77
>3hdo_A Histidinol-phosphate aminotransferase; PSI-II, histidinol-phosphate aminotrans structural genomics, protein structure initiative; 1.61A {Geobacter metallireducens gs-15}
Probab=100.00 E-value=1.2e-40 Score=311.83 Aligned_cols=329 Identities=15% Similarity=0.256 Sum_probs=267.4
Q ss_pred cCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcC--CCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChH
Q 014936 33 NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSE--KFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCT 110 (415)
Q Consensus 33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~--~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~ 110 (415)
+++.+++|+.|++. +++++.+++++.+.+... ....|++. +..++|+++++++ ++++++|++|+|++
T Consensus 24 ~~~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~~~~~~~~y~~~-~~~~lr~~la~~~------g~~~~~i~~t~g~~ 92 (360)
T 3hdo_A 24 DIASWIKLNTNENP----YPPSPEVVKAILEELGPDGAALRIYPSA-SSQKLREVAGELY------GFDPSWIIMANGSD 92 (360)
T ss_dssp CCTTSEECSSCCCS----SCCCHHHHHHHHHHHTTTCGGGGSCCCS-SCHHHHHHHHHHH------TCCGGGEEEESSHH
T ss_pred cccceeeccCCCCC----CCCCHHHHHHHHHHHhcccchhhcCCCC-chHHHHHHHHHHh------CcCcceEEEcCCHH
Confidence 35679999999864 778999999999988764 14578764 6799999999999 46789999999999
Q ss_pred HHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCC
Q 014936 111 QAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVY 190 (415)
Q Consensus 111 ~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~ 190 (415)
+++..++.++.++||+|+++.|+|.++...++..|.++..++.+. ++.+ +++++.+ +++++++++|+||||.++
T Consensus 93 ~al~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~v~~~~--~~~~--~~l~~~~--~~~~v~i~~p~nptG~~~ 166 (360)
T 3hdo_A 93 EVLNNLIRAFAAEGEEIGYVHPSYSYYGTLAEVQGARVRTFGLTG--DFRI--AGFPERY--EGKVFFLTTPNAPLGPSF 166 (360)
T ss_dssp HHHHHHHHHHCCTTCEEEEESSSCTHHHHHHHHHTCEEEEECBCT--TSSB--TTCCSSB--CSSEEEEESSCTTTCCCC
T ss_pred HHHHHHHHHHhCCCCEEEEcCCChHHHHHHHHHCCCEEEEeeCCC--CCCH--HHHHhhc--CCCEEEEeCCCCCCCCCc
Confidence 999999999999999999999999999999999999999998743 3334 5555444 356899999999999999
Q ss_pred CHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHH
Q 014936 191 SYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPK 270 (415)
Q Consensus 191 ~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~ 270 (415)
+.+++.+| |+++|+++|+||+|+.+. +..... ..+..++++++.|+||.|+++|+|+||+++++ +
T Consensus 167 ~~~~l~~l---~~~~~~~li~De~~~~~~--~~~~~~--~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~--------~ 231 (360)
T 3hdo_A 167 PLEYIDEL---ARRCAGMLVLDETYAEFA--ESNALE--LVRRHENVVVTRTLSKSYSLAGMRIGLAIARP--------E 231 (360)
T ss_dssp CHHHHHHH---HHHBSSEEEEECTTGGGS--SCCCTH--HHHHCSSEEEEEESTTTTSCTTSCCEEEECCH--------H
T ss_pred CHHHHHHH---HHHCCCEEEEECChHhhC--CcchhH--HhccCCCEEEEecchHhhcCCccceeeEeeCH--------H
Confidence 98766555 557899999999999863 332222 22334678999999999999999999999854 6
Q ss_pred HHHHHHhhccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCcccc
Q 014936 271 VVERMKKYFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLL 350 (415)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~ 350 (415)
+++.+..... .++.+++.+.++.++|+. .+++++.+++++++++.+.+.|+++ ++. + .+..+.|+|+.++.
T Consensus 232 ~~~~~~~~~~-~~~~~~~~~~a~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~-~~~-~-~~~~~~~~~~~~~~--- 302 (360)
T 3hdo_A 232 VIAALDKIRD-HYNLDRLAQAACVAALRD--QAYLSECCRRIRETREWFTTELRSI-GYD-V-IPSQGNYLFATPPD--- 302 (360)
T ss_dssp HHHHHHHHSC-SCCSCHHHHHHHHHHHHC--HHHHHHHHHHHHHHHHHHHHHHHHT-TCE-E-CCCSSSEEEEECTT---
T ss_pred HHHHHHHhCC-CCCCCHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHHHHHC-CCE-E-cCCCccEEEEECCC---
Confidence 8888877654 467899999999999986 5778999999999999999999988 777 4 46677888887753
Q ss_pred CCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEeeCChhhHHHHHHHHHHHHHH
Q 014936 351 DDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFAVDPYSLEECLDRIKSFYQR 407 (415)
Q Consensus 351 ~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~~~l~~~l~~l~~~~~~ 407 (415)
.+..++...+ .++||.+.|+..++.++++||+++ ++++++.+++.|+++.+.
T Consensus 303 ---~~~~~l~~~l-~~~gi~v~~~~~~~~~~~iRis~~-~~~e~~~l~~al~~~~~~ 354 (360)
T 3hdo_A 303 ---RDGKRVYDGL-YARKVLVRHFSDPLLAHGMRISIG-TREEMEQTLAALKEIGEG 354 (360)
T ss_dssp ---CCHHHHHHHH-HHTTEECBCCCSTTTTTSEEEECC-CHHHHHHHHHHHHHHHC-
T ss_pred ---CCHHHHHHHH-HHCCEEEEECCCCCCCCEEEEEcC-CHHHHHHHHHHHHHHhcc
Confidence 2456666655 567999999887666789999998 788999999998887654
No 78
>3bwn_A AT1G70560, L-tryptophan aminotransferase; auxin synthesis, pyridoxal-5'- phosphate, indole-3-pyruvate; HET: LLP PMP PHE; 2.25A {Arabidopsis thaliana} PDB: 3bwo_A*
Probab=100.00 E-value=2.2e-43 Score=333.40 Aligned_cols=331 Identities=19% Similarity=0.205 Sum_probs=254.8
Q ss_pred cCcceeEecccCCCCCCCCCCcHHHHHHHHHHHh-c--CCCCCCCCCCCc-----HHHHHHHHHHHhhhCCCCCCC-CcE
Q 014936 33 NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALL-S--EKFNGYAPTAGL-----PLTRRAIAEYLSRDLPYKLTP-NDV 103 (415)
Q Consensus 33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~-~--~~~~~y~~~~g~-----~~lr~~ia~~~~~~~~~~~~~-~~i 103 (415)
.++++++|+.|.|+ ++.++.+.+++.+... . .....|+++.|. ++||+++|+|++ .+|..+.+ ++|
T Consensus 20 ~~~~~i~l~~g~p~----~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~~~~~~lr~aia~~~~-~~g~~~~~~~~i 94 (391)
T 3bwn_A 20 MSDFVVNLDHGDPT----AYEEYWRKMGDRCTVTIRGCDLMSYFSDMTNLCWFLEPELEDAIKDLHG-VVGNAATEDRYI 94 (391)
T ss_dssp TTTSCEECSSCCCG----GGHHHHHHTGGGSCEEECTTTTCSSCSCTTSSSTTSCHHHHHHHHHHHH-HHCSBCCSSSEE
T ss_pred CCCCeeEcCCCCCC----CCCCHHHHHhHHHHhhcCccchhhcCCCCCCcccccCHHHHHHHHHHHH-hcCCCCCCCCeE
Confidence 46778999999975 4445556555533221 1 134579998998 999999999998 45767777 599
Q ss_pred EEeCChHHHHHHHHHHhcCCCC----EEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEe
Q 014936 104 FVTSGCTQAIDVAMALLSRPGA----NILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVI 179 (415)
Q Consensus 104 ~i~~g~~~al~~~~~~l~~~gd----~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i 179 (415)
++|+|+++++.+++.+++++|| +|++++|+|..+...++..|+++..++++.+ + +. .++++++++
T Consensus 95 ~~t~G~~~al~~~~~~l~~~Gd~~~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~~d~~-~--l~--------~~~~k~v~l 163 (391)
T 3bwn_A 95 VVGTGSTQLCQAAVHALSSLARSQPVSVVAAAPFYSTYVEETTYVRSGMYKWEGDAW-G--FD--------KKGPYIELV 163 (391)
T ss_dssp EEEEHHHHHHHHHHHHHHHTSSSSSEEEEECSSCCTHHHHHHHTTCBTTEEEEEEST-T--CC--------CCSCEEEEE
T ss_pred EEeCChHHHHHHHHHHhcCCCCCCcceEEEcCCCchhHHHHHHHcCCeEEEecCCHH-H--cC--------CCCCEEEEE
Confidence 9999999999999999999999 9999999999999999999999988887532 2 22 246889999
Q ss_pred cCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEe
Q 014936 180 INPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVT 259 (415)
Q Consensus 180 ~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~ 259 (415)
++||||||.+++ +|++.++.+++++|+||+|.. + ...++.. ..+++++++||||.|+++|+|+||+++
T Consensus 164 ~~p~NPtG~~~~-----~l~~~~~~~~~~ii~De~y~~----~-~~~~l~~--~~~~~i~~~S~SK~~g~~GlRiG~~~~ 231 (391)
T 3bwn_A 164 TSPNNPDGTIRE-----TVVNRPDDDEAKVIHDFAYYW----P-HYTPITR--RQDHDIMLFTFSKITGHAGSRIGWALV 231 (391)
T ss_dssp ESSCTTTCCCCC-----CCC-----CCCEEEEECTTCS----T-TTSCCCC--CBCCSEEEEEHHHHHSCGGGCEEEEEE
T ss_pred CCCCCCCchhHH-----HHHHHhhcCCCEEEEeCCCCC----C-CCCcccc--CCCCeEEEEechhhcCCCccceEEEEe
Confidence 999999999986 354422333499999999974 1 1223322 345789999999999999999999997
Q ss_pred eCCCCCCChHHHHHHHHhhcc-ccCCchhHHHHHHHHhhCCCc---------HHHHHHHHHHHHHHHHHHHHHhhcCCCC
Q 014936 260 TDPCGMFRKPKVVERMKKYFD-ILGDPATFIQAAVPSILQQPD---------EVFFKKTLNLLKQSVDICYNKIKEIPCI 329 (415)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~a~~~~l~~~~---------~~~~~~~~~~~~~~~~~l~~~l~~~~~~ 329 (415)
++ +++++.+..... ...+++.+.|.++..+|+... +.++++.++.++++++.+.+.|+++|++
T Consensus 232 ~~-------~~l~~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~ 304 (391)
T 3bwn_A 232 KD-------KEVAKKMVEYIIVNSIGVSKESQVRTAKILNVLKETCKSESESENFFKYGREMMKNRWEKLREVVKESDAF 304 (391)
T ss_dssp CC-------HHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHHHHHTTCCCTTTSHHHHHHHHHHHHHHHHHHHHHTCSSE
T ss_pred cC-------HHHHHHHHHHhcccccCCCHHHHHHHHHHHhCcchhccccccHHHHHHHHHHHHHHHHHHHHHHHHhCCCc
Confidence 32 257777776643 346788999999999987531 3578899999999999999999988766
Q ss_pred cCCCC-------------CCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCC-CCeEEEEeeCChhhHH
Q 014936 330 SCPHK-------------PEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGL-KNWLRVTFAVDPYSLE 395 (415)
Q Consensus 330 ~~~~~-------------p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~-~~~iRi~~~~~~~~l~ 395 (415)
. +.. |.+|+|+|++++. . +.+..+++++||.+.||+.|+. ++++|||++.++++++
T Consensus 305 ~-~~~p~~~~~~f~~~~~~~~g~~~~~~~~~--------~-~~~~~~l~~~gV~v~pg~~fg~~~~~iRis~~~~~e~i~ 374 (391)
T 3bwn_A 305 T-LPKYPEAFCNYFGKSLESYPAFAWLGTKE--------E-TDLVSELRRHKVMSRAGERCGSDKKHVRVSMLSREDVFN 374 (391)
T ss_dssp E-CCCCCCEEETTTTEEECCCCSEEEEEESS--------S-CCHHHHHHHTTEECEEGGGGTCCTTEEEEESCSCHHHHH
T ss_pred c-cccCCccccccccccCCCcceEEEecCCc--------H-HHHHHHHHHCCEEEccCCCCCCCCCEEEEEecCCHHHHH
Confidence 5 323 3456689998863 1 2455667788999999999986 6899999988899999
Q ss_pred HHHHHHHHHHHHH
Q 014936 396 ECLDRIKSFYQRH 408 (415)
Q Consensus 396 ~~l~~l~~~~~~~ 408 (415)
+++++|++++++.
T Consensus 375 ~~~~~L~~~~~~~ 387 (391)
T 3bwn_A 375 VFLERLANMKLIK 387 (391)
T ss_dssp HHHHHHHSCC---
T ss_pred HHHHHHHHHHHhh
Confidence 9999999887653
No 79
>4h51_A Aspartate aminotransferase; ssgcid, structural genomics, seattle struc genomics center for infectious disease, aspartate aminotran transferase; HET: LLP; 1.85A {Leishmania major}
Probab=100.00 E-value=2.2e-41 Score=319.23 Aligned_cols=376 Identities=13% Similarity=0.068 Sum_probs=271.7
Q ss_pred CccccCCccCCcc-hhhHHHHHHHhhhcccccccCcceeEecccCC-CCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCC
Q 014936 1 MEISNGGIDNTGS-IITIKGMLSLLMQSVDDEKNEKKVISLAMGDP-TVHSCFHTTHVATEAVAEALLSEKFNGYAPTAG 78 (415)
Q Consensus 1 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~-~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g 78 (415)
|+.+.|....+.. ..+|..+...+.++ +.+.|||+.|.. +.....++.+.|++|.+..++.+....|.+..|
T Consensus 15 m~~~~~~~~v~~~p~d~i~~l~~~~~~d------~~~kinLgvG~y~d~~g~~~vl~~Vk~A~~~~~~~~~~~~Y~p~~G 88 (420)
T 4h51_A 15 MTTAERWQKIQAQAPDVIFDLAKRAAAA------KGPKANLVIGAYRDEQGRPYPLRVVRKAEQLLLDMNLDYEYLPISG 88 (420)
T ss_dssp CCHHHHHHTCCCCCCCHHHHHHHHHHHC------CSSCEECCSCCCBCTTSCBCCCHHHHHHHHHHHHTTCCCCCCCTTC
T ss_pred hhhhHHHhCCCCCCCChHHHHHHHHhcC------CCCCEEeecCcccCCCCCCCCCHHHHHHHHHHhcCCCCCCCCCcCC
Confidence 4444444444333 23666666654443 335899999942 111224566899999888877665557999999
Q ss_pred cHHHHHHHHHHHhhhCCCCCCCCc--EEEeCChHHHHHHHHHHh----cCCCCEEEEcCCCCcchHHHHHhCCCe-EEEe
Q 014936 79 LPLTRRAIAEYLSRDLPYKLTPND--VFVTSGCTQAIDVAMALL----SRPGANILLPRPGFPIYELSAAFRHIE-VRHF 151 (415)
Q Consensus 79 ~~~lr~~ia~~~~~~~~~~~~~~~--i~i~~g~~~al~~~~~~l----~~~gd~vi~~~p~y~~~~~~~~~~g~~-~~~~ 151 (415)
.++||+++++++.. -....+. .+-|.|+|.|+..++..+ .++||+|++++|+|++|...++..|.+ +..+
T Consensus 89 ~p~lr~aia~~~~g---~~~~~~~~~~~qt~ggtga~~~a~~~l~~~~~~pgd~V~ip~P~w~~y~~i~~~aG~~~V~~~ 165 (420)
T 4h51_A 89 YQPFIDEAVKIIYG---NTVELENLVAVQTLSGTGAVSLGAKLLTRVFDAETTPIYLSDPTWPNHYGVVKAAGWKNICTY 165 (420)
T ss_dssp CHHHHHHHHHHHHC------CGGGEEEEEEEHHHHHHHHHHHHHTTTSCTTTSCEEEEESCCTHHHHHHHHTTCCCEEEE
T ss_pred hHHHHHHHHHHhcC---CCccccccceeeecCchHHHHHHHHHHHHhcCCCCCEEEEecCCchhHHHHHHHcCCeEEEee
Confidence 99999999999842 2223333 345888888887766654 479999999999999999999999987 4555
Q ss_pred eccCCCCCCCChhHHHhhc---CCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccc
Q 014936 152 DLLPDKGWEVDLDDIESLA---DQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPM 228 (415)
Q Consensus 152 ~~~~~~~~~~~~~~l~~~~---~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~ 228 (415)
+....+.+.+|.+.+.+.+ .++++++++++||||||.+++.+++++|+++|+++++++|+|++|.++.+++......
T Consensus 166 ~~~~~~~~~~d~~~~~~~l~~~~~~~~vll~~~p~NPtG~~~~~~~~~~i~~~~~~~~~~~~~D~~Y~~~~~~~~~~~~~ 245 (420)
T 4h51_A 166 AYYDPKTVSLNFEGMKKDILAAPDGSVFILHQCAHNPTGVDPSQEQWNEIASLMLAKHHQVFFDSAYQGYASGSLDTDAY 245 (420)
T ss_dssp ECEEGGGTEECHHHHHHHHHHSCSSCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTTTTSCHHHHTH
T ss_pred ccccccccCCCHHHHHHHHhccCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceEeeehhhhhhccCCcccchH
Confidence 5544455677888877655 3567788889999999999999999999999999999999999999998765332221
Q ss_pred ---cccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHH----HHHhh-ccccCCchhHHHHHHHHhhCCC
Q 014936 229 ---GVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVE----RMKKY-FDILGDPATFIQAAVPSILQQP 300 (415)
Q Consensus 229 ---~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~----~~~~~-~~~~~~~~~~~~~a~~~~l~~~ 300 (415)
......++++++.||||.|+++|+|+||++++... .+... .+... .....+++...|.++..++.+.
T Consensus 246 ~~~~~~~~~~~~i~~~s~SK~~~~~G~RvG~~~~~~~~-----~~~~~~~~~~l~~~~r~~~s~~p~~~a~~~~~~l~d~ 320 (420)
T 4h51_A 246 AARLFARRGIEVLLAQSFSKNMGLYSERAGTLSLLLKD-----KTKRADVKSVMDSLIREEYTCPPAHGARLAHLILSNN 320 (420)
T ss_dssp HHHHHHHTTCCCEEEEECTTTSCCGGGCEEEEEEECSC-----HHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHHSH
T ss_pred HHHhHHhhCceEEEEeccccccccccCceEEEEecccC-----HHHHHHHHHHHHHhhhcccCcchHHHHHHHHHHhcCH
Confidence 11233457899999999999999999999887532 12222 22222 2234677888898888888763
Q ss_pred c-----HHHHHHHHHHHHHHHHHHHHHhhcCC---CCcCCCCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEE
Q 014936 301 D-----EVFFKKTLNLLKQSVDICYNKIKEIP---CISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIIL 372 (415)
Q Consensus 301 ~-----~~~~~~~~~~~~~~~~~l~~~l~~~~---~~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~ 372 (415)
. +..++.++++++++|+.+.+.|+++. .+. ...+++|+|.|+.++ .+ .++ +|+++||.+.
T Consensus 321 ~l~~~~~~~~~~m~~r~~~~R~~l~~~L~~~g~~~~~~-~i~~q~GmF~~~gls---------~e-~v~-~L~e~~Vy~~ 388 (420)
T 4h51_A 321 ELRKEWEAELSAMAERIRTMRRTVYDELLRLQTPGSWE-HVINQIGMFSFLGLS---------KA-QCE-YCQNHNIFIT 388 (420)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSCCT-HHHHCCSSEEECCCC---------HH-HHH-HHHHTTEECC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCC-eecCCCceEEecCcC---------HH-HHH-HHHhCCEEEc
Confidence 2 24567788899999999999998762 133 235788999997663 23 344 5578899998
Q ss_pred cCCCCCCCCeEEEEee-CChhhHHHHHHHHHHHHHHHHH
Q 014936 373 PGTAVGLKNWLRVTFA-VDPYSLEECLDRIKSFYQRHAK 410 (415)
Q Consensus 373 ~g~~~~~~~~iRi~~~-~~~~~l~~~l~~l~~~~~~~~~ 410 (415)
|+. |||++ .++++++.++++|.+++++..+
T Consensus 389 ~~g--------Ris~Agl~~~ni~~~a~aI~~vvr~i~r 419 (420)
T 4h51_A 389 VSG--------RANMAGLTHETALMLAQTINDAVRNVNR 419 (420)
T ss_dssp TTC--------EEEGGGCCHHHHHHHHHHHHHHHC----
T ss_pred CCC--------EEEeccCCHHHHHHHHHHHHHHHHHhhc
Confidence 864 99995 7999999999999999987655
No 80
>2hox_A ALLIIN lyase 1; cysteine sulphoxide lyase, ALLIINASE; HET: NAG FUC BMA P1T; 1.40A {Allium sativum} SCOP: c.67.1.1 PDB: 2hor_A* 1lk9_A*
Probab=100.00 E-value=3.3e-42 Score=328.55 Aligned_cols=333 Identities=14% Similarity=0.147 Sum_probs=267.4
Q ss_pred ccCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCC--CCCCCCC-C---cHHHHHHHHHHHhhhCCCCCCCCcEEE
Q 014936 32 KNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKF--NGYAPTA-G---LPLTRRAIAEYLSRDLPYKLTPNDVFV 105 (415)
Q Consensus 32 ~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~--~~y~~~~-g---~~~lr~~ia~~~~~~~~~~~~~~~i~i 105 (415)
.+++.+++|+.|+|+ +++++.+++++.+.+..... ..|++.. | .++||++||+|+++..+..+++++|++
T Consensus 53 ~~~~~~i~l~~g~~~----~~~~~~v~~a~~~~l~~~~~~~~~Y~~~~~G~~~~~~lr~aia~~~~~~~~~~~~~~~iv~ 128 (427)
T 2hox_A 53 KIQGCSADVASGDGL----FLEEYWKQHKEASAVLVSPWHRMSYFFNPVSNFISFELEKTIKELHEVVGNAAAKDRYIVF 128 (427)
T ss_dssp ECTTCCEECCSCCCG----GGHHHHTTSHHHHCEEECTTTTCSSSCSSCCTTCCHHHHHHHHHHHHHHTCBCCTTCEEEE
T ss_pred cCCCceEEecCcCCC----CCCCHHHHHhHHhhhhcCCcccccCCCCCCCccchHHHHHHHHHHHHHhCCcCCCCCEEEE
Confidence 456688999999975 56678888888877732222 2498877 8 999999999999876666678999999
Q ss_pred eCChHHHHHHHHHHh--------cCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEE
Q 014936 106 TSGCTQAIDVAMALL--------SRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVAL 177 (415)
Q Consensus 106 ~~g~~~al~~~~~~l--------~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v 177 (415)
|+|+++++.+++.++ .++||+|+++.|+|..+...++..|.+++.+ .+|++.|+++++++++++
T Consensus 129 t~G~~~al~~~~~~l~~~~~~~~~~~Gd~Vlv~~P~y~~~~~~~~~~g~~~~~~--------~~d~~~l~~~~~~~~k~v 200 (427)
T 2hox_A 129 GVGVTQLIHGLVISLSPNMTATPDAPESKVVAHAPFYPVFREQTKYFDKKGYVW--------AGNAANYVNVSNPEQYIE 200 (427)
T ss_dssp ESHHHHHHHHHHHHHSCCTTTCTTSCCEEEEECSSCCHHHHHHHHHSCBTTEEE--------EEEGGGGTTCSCGGGEEE
T ss_pred eCCHHHHHHHHHHHHhhccccccCCCCCEEEEeCCCcccHHHHHHHcCCeeeee--------cCCHHHHHHhhcCCceEE
Confidence 999999999999999 8999999999999999999999999887643 357888988888889999
Q ss_pred EecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEE
Q 014936 178 VIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWF 257 (415)
Q Consensus 178 ~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~ 257 (415)
++++||||||.+++ +. ++ ++..+.|+++.. ...++..+. .+++++++||||.|+++|+|+||+
T Consensus 201 ~l~~p~NPtG~~~~-~~-------l~--~~~~i~d~~~~~------~~~s~~~~~-~~~~i~~~S~SK~~g~~G~RiG~~ 263 (427)
T 2hox_A 201 MVTSPNNPEGLLRH-AV-------IK--GCKSIYDMVYYW------PHYTPIKYK-ADEDILLFTMSKFTGHSGSRFGWA 263 (427)
T ss_dssp EEESSCTTTCCCCC-CS-------ST--TCEEEEECTTCS------TTTSCCCSC-BCCSEEEEEHHHHTSCGGGCCEEE
T ss_pred EEcCCCCCcccccH-HH-------Hc--CCCEEEeecccC------CCCCccccC-CCceEEEEeChhcCCCCCceEEEE
Confidence 99999999999999 42 22 556778877742 122333333 467899999999999999999999
Q ss_pred EeeCCCCCCChHHHHHHHHhhcc-ccCCchhHHHHHHHHhhCCC----------cHHHHHHHHHHHHHHHHHHHHHhhcC
Q 014936 258 VTTDPCGMFRKPKVVERMKKYFD-ILGDPATFIQAAVPSILQQP----------DEVFFKKTLNLLKQSVDICYNKIKEI 326 (415)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~a~~~~l~~~----------~~~~~~~~~~~~~~~~~~l~~~l~~~ 326 (415)
++++ +++++.+..... ...+++.+.|.++..+|+.. .++++++.++.++++++.+.+.|+++
T Consensus 264 ~~~~-------~~l~~~l~~~~~~~~~~~~~~~q~a~~~~L~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 336 (427)
T 2hox_A 264 LIKD-------ESVYNNLLNYMTKNTEGTPRETQLRSLKVLKEVVAMVKTQKGTMRDLNTFGFKKLRERWVNITALLDQS 336 (427)
T ss_dssp EECC-------HHHHHHHHHHHHHHTSSCCHHHHHHHHHHHHHHHHHHHHHTTSTTSHHHHHHHHHHHHHHHHHHHHTTS
T ss_pred EECC-------HHHHHHHHHHHHhcCCCCCHHHHHHHHHHhhcchhhhccccchhHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 9953 268888877643 34678889999988888752 13466778899999999999999987
Q ss_pred CCCcC-------------CCCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCC-CCeEEEEeeCChh
Q 014936 327 PCISC-------------PHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGL-KNWLRVTFAVDPY 392 (415)
Q Consensus 327 ~~~~~-------------~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~-~~~iRi~~~~~~~ 392 (415)
+++.+ +..|.+|+|+|++++. +..+++..+++++||.+.||..|+. ++++|||++.+++
T Consensus 337 ~g~~~~~~~~~~~~~~~~~~~p~~g~f~~~~~~~-------~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~Ris~~~~~e 409 (427)
T 2hox_A 337 DRFSYQELPQSEYCNYFRRMRPPSPSYAWVKCEW-------EEDKDCYQTFQNGRINTQNGVGFEASSRYVRLSLIKTQD 409 (427)
T ss_dssp SSEECCCCCSCEEETTTTEEECCCCSEEEEEECS-------GGGCSHHHHHHHTTEECEEGGGGTSCTTEEEEECSSCHH
T ss_pred cCccccccccccccccccccCCCCceEEEEECCC-------cHHHHHHHHHHHCCEEEcCCCccCCCCCEEEEEecCCHH
Confidence 66652 1246679999999863 2445677777788999999999886 7899999988999
Q ss_pred hHHHHHHHHHHHHHH
Q 014936 393 SLEECLDRIKSFYQR 407 (415)
Q Consensus 393 ~l~~~l~~l~~~~~~ 407 (415)
++++++++|++++++
T Consensus 410 ~l~~~l~~l~~~~~~ 424 (427)
T 2hox_A 410 DFDQLMYYLKDMVKA 424 (427)
T ss_dssp HHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHhh
Confidence 999999999988753
No 81
>1uu1_A Histidinol-phosphate aminotransferase; histidine biosynthesis, pyridoxal phosphate, complete proteome; HET: PMP HSA; 2.38A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1uu0_A 1h1c_A* 1uu2_A* 2f8j_A*
Probab=100.00 E-value=8.6e-40 Score=302.91 Aligned_cols=316 Identities=17% Similarity=0.247 Sum_probs=255.8
Q ss_pred cceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHH
Q 014936 35 KKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAID 114 (415)
Q Consensus 35 ~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~ 114 (415)
+.+++|+.|.+. +++++.+++++.+.+.......|++. +..++|+++++++++. .+++++|++|+|+++++.
T Consensus 19 ~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~~~~~~y~~~-~~~~lr~~la~~~~~~---~~~~~~v~~~~G~~~al~ 90 (335)
T 1uu1_A 19 RDKTYLALNENP----FPFPEDLVDEVFRRLNSDALRIYYDS-PDEELIEKILSYLDTD---FLSKNNVSVGNGADEIIY 90 (335)
T ss_dssp CCSEEESSCCCS----SCCCHHHHHHHHHTCCGGGGGSCCCS-SCHHHHHHHHHHHTCS---SCCGGGEEEESSHHHHHH
T ss_pred CcceECCCCCCC----CCCCHHHHHHHHHHhhhhhhhcCCCC-chHHHHHHHHHHcCCC---CCCHHHEEEcCChHHHHH
Confidence 468999999853 56789999999998743334578764 6899999999999532 367889999999999999
Q ss_pred HHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHH
Q 014936 115 VAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQH 194 (415)
Q Consensus 115 ~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~ 194 (415)
.++.++ ||+|+++ |+|+.+...++..|.++..++.+ .++.+|++++ ++++++++++|+||||.++|.++
T Consensus 91 ~~~~~~---gd~Vl~~-p~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l-----~~~~~v~l~~p~nptG~~~~~~~ 159 (335)
T 1uu1_A 91 VMMLMF---DRSVFFP-PTYSCYRIFAKAVGAKFLEVPLT--KDLRIPEVNV-----GEGDVVFIPNPNNPTGHVFEREE 159 (335)
T ss_dssp HHHHHS---SEEEECS-SSCHHHHHHHHHHTCEEEECCCC--TTSCCCCCCC-----CTTEEEEEESSCTTTCCCCCHHH
T ss_pred HHHHHh---CCcEEEC-CCcHHHHHHHHHcCCeEEEeccC--CCCCCCHHHc-----CCCCEEEEeCCCCCCCCCCCHHH
Confidence 999998 8999999 99999999999999999988874 3456787776 46889999999999999999999
Q ss_pred HHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHHH
Q 014936 195 LQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVER 274 (415)
Q Consensus 195 l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~ 274 (415)
+.+|+++| | ++|+||+|+++... .. +..++..+++++++|+||.|+++|+|+||+++++ ++++.
T Consensus 160 l~~l~~~~---~-~li~De~~~~~~~~--~~--~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~--------~~~~~ 223 (335)
T 1uu1_A 160 IERILKTG---A-FVALDEAYYEFHGE--SY--VDFLKKYENLAVIRTFSKAFSLAAQRVGYVVASE--------KFIDA 223 (335)
T ss_dssp HHHHHHTT---C-EEEEECTTHHHHCC--CC--GGGGGTCSSEEEEEESTTTTTCGGGCCEEEEECH--------HHHHH
T ss_pred HHHHHHhC---C-EEEEECcchhhcch--hH--HHHhhhCCCEEEEecchhhcCCcccCeEEEEeCH--------HHHHH
Confidence 99999987 7 89999999976532 11 2223444578999999999988999999999954 67777
Q ss_pred HHhhccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCccccCCCC
Q 014936 275 MKKYFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLDDII 354 (415)
Q Consensus 275 ~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~~~~~ 354 (415)
+..... .++++++.|.++.++|+. .+++++.+++++++++.+.+.|+++ ++. + .|.+|+|+|++++. .
T Consensus 224 l~~~~~-~~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~-~~~~~~~~~~~~~~------~ 291 (335)
T 1uu1_A 224 YNRVRL-PFNVSYVSQMFAKVALDH--REIFEERTKFIVEERERMKSALREM-GYR-I-TDSRGNFVFVFMEK------E 291 (335)
T ss_dssp HHHHSC-TTCSCHHHHHHHHHHHHT--HHHHHHHHHHHHHHHHHHHHHHHHH-TCC-B-CCCCSSEEEEECCT------H
T ss_pred HHHhcC-CCCcCHHHHHHHHHHhCC--HHHHHHHHHHHHHHHHHHHHHHHHC-CcE-E-cCCCCeEEEEECCC------C
Confidence 776543 357889999999999976 3678889999999999999999987 676 4 46678899988863 1
Q ss_pred CHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEeeCChhhHHHHHHHHHHH
Q 014936 355 DDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFAVDPYSLEECLDRIKSF 404 (415)
Q Consensus 355 ~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~~~l~~~l~~l~~~ 404 (415)
+..++...++ ++||.+.|+ ++++|++++. ++++++++++|+++
T Consensus 292 ~~~~~~~~l~-~~gi~v~~~-----~~~iRis~~~-~~~i~~~~~~l~~~ 334 (335)
T 1uu1_A 292 EKERLLEHLR-TKNVAVRSF-----REGVRITIGK-REENDMILRELEVF 334 (335)
T ss_dssp HHHHHHHHHH-HHTEEEEEE-----TTEEEEECCC-HHHHHHHHHHHHCC
T ss_pred CHHHHHHHHH-HCCEEEEEC-----CCeEEEEeCC-HHHHHHHHHHHHhh
Confidence 3456666665 579999983 4799999965 56799999888753
No 82
>3a2b_A Serine palmitoyltransferase; vitamin B6-dependent enzyme fold type I, acyltransferase, PY phosphate; HET: PLP; 2.30A {Sphingobacterium multivorum}
Probab=100.00 E-value=9.3e-38 Score=296.24 Aligned_cols=337 Identities=14% Similarity=0.133 Sum_probs=260.5
Q ss_pred cCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcC--CCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChH
Q 014936 33 NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSE--KFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCT 110 (415)
Q Consensus 33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~--~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~ 110 (415)
+++.++||+.|+| .++++++.+.+++.+.+... ....|+...|..++++++++++++.+| .+++++|+|++
T Consensus 41 ~g~~~idl~~~~~---~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g----~~~v~~~~ggt 113 (398)
T 3a2b_A 41 DGRRVLMFGSNSY---LGLTTDTRIIKAAQDALEKYGTGCAGSRFLNGTLDIHVELEEKLSAYVG----KEAAILFSTGF 113 (398)
T ss_dssp TTEEEEECSCSCT---TCGGGCHHHHHHHHHHHHHHCSCCCSBTTTTCCCHHHHHHHHHHHHHHT----CSEEEEESSHH
T ss_pred CCceEEEeecccc---cCCCCCHHHHHHHHHHHHHcCCCCCCcCcccCCcHHHHHHHHHHHHHhC----CCcEEEECCHH
Confidence 3567899999986 23557899999999887642 223455667778888888888887666 36999999999
Q ss_pred HHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCC----CceEEEecCCCCcc
Q 014936 111 QAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ----NTVALVIINPGNPC 186 (415)
Q Consensus 111 ~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~----~~~~v~i~~p~npt 186 (415)
+++..++.++.++||.|+++.|+|..+...++..|.+++.++. +|+++|++.+++ +++++++++|+|||
T Consensus 114 ~a~~~~~~~~~~~gd~V~~~~p~~~~~~~~~~~~g~~~~~v~~-------~d~~~l~~~l~~~~~~~~~~v~~~~~~npt 186 (398)
T 3a2b_A 114 QSNLGPLSCLMGRNDYILLDERDHASIIDGSRLSFSKVIKYGH-------NNMEDLRAKLSRLPEDSAKLICTDGIFSME 186 (398)
T ss_dssp HHHHHHHHHSSCTTCEEEEETTCCHHHHHHHHHSSSEEEEECT-------TCHHHHHHHHHTSCSSSCEEEEEESBCTTT
T ss_pred HHHHHHHHHHhCCCCEEEECCccCHHHHHHHHHcCCceEEeCC-------CCHHHHHHHHHhhccCCceEEEEeCCCCCC
Confidence 9999999999999999999999999999999999999998875 578999988866 68899999999999
Q ss_pred ccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCC-eEEEccCccccCCCCceEEEEEeeCCCCC
Q 014936 187 GNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVP-ILTLGSLSKRWIVPGWRLGWFVTTDPCGM 265 (415)
Q Consensus 187 G~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~-~i~~~s~sK~~~~~G~r~G~~~~~~~~~~ 265 (415)
|.+++ +++|+++|+++|+++|+||+|+.+.++.........++..++ +++++|+||.++++| ||+++++
T Consensus 187 G~~~~---~~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~di~~~s~sK~~~~~G---G~~~~~~---- 256 (398)
T 3a2b_A 187 GDIVN---LPELTSIANEFDAAVMVDDAHSLGVIGHKGAGTASHFGLNDDVDLIMGTFSKSLASLG---GFVAGDA---- 256 (398)
T ss_dssp CCBCC---HHHHHHHHHHHTCEEEEECTTTTTTSSGGGCCHHHHHTCGGGCSEEEEESSSTTCSSC---EEEEECH----
T ss_pred CCccC---HHHHHHHHHHcCcEEEEECCCcccccCCCCCchHhhcCCCcCCeEEEecccccccCCC---cEEEeCH----
Confidence 99976 788899999999999999999987664222111122222233 499999999998778 9999864
Q ss_pred CChHHHHHHHHhh-c-cccCCchhHHHH-HHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEE
Q 014936 266 FRKPKVVERMKKY-F-DILGDPATFIQA-AVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVM 342 (415)
Q Consensus 266 ~~~~~~~~~~~~~-~-~~~~~~~~~~~~-a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~ 342 (415)
++++.+... . ....+.+.+.|. ++..+|+. .+++++.+++++++++++.+.|+++ ++. +..| .|+++|
T Consensus 257 ----~~~~~l~~~~~~~~~~~~~~~~~~a~~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~-~g~~~~ 327 (398)
T 3a2b_A 257 ----DVIDFLKHNARSVMFSASMTPASVASTLKALEI--IQNEPEHIEKLWKNTDYAKAQLLDH-GFD-LGAT-ESPILP 327 (398)
T ss_dssp ----HHHHHHHHHCHHHHSSBCCCHHHHHHHHHHHHH--HHHCTHHHHHHHHHHHHHHHHHHHT-TCC-BCSC-CSSEEE
T ss_pred ----HHHHHHHHhcccceecCCCCHHHHHHHHHHHHH--HhhCHHHHHHHHHHHHHHHHHHHhc-CCC-cCCC-CCCEEE
Confidence 677777663 2 222333444554 55567754 2445678899999999999999988 777 4344 478999
Q ss_pred EecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCC---CCeEEEEee--CChhhHHHHHHHHHHHHHHH
Q 014936 343 LKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGL---KNWLRVTFA--VDPYSLEECLDRIKSFYQRH 408 (415)
Q Consensus 343 ~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~---~~~iRi~~~--~~~~~l~~~l~~l~~~~~~~ 408 (415)
+.++.. .+..++...++++ ||.+.||..|.. .+++||+++ .+++++++++++|+++++++
T Consensus 328 ~~~~~~-----~~~~~l~~~l~~~-gi~v~~~~~~~~~~~~~~iRis~~~~~~~e~i~~~~~~l~~~l~~~ 392 (398)
T 3a2b_A 328 IFIRSN-----EKTFWVTKMLQDD-GVFVNPVVSPAVPAEESLIRFSLMATHTYDQIDEAIEKMVKVFKQA 392 (398)
T ss_dssp EECCCH-----HHHHHHHHHHHHT-TEECEEECTTTSCGGGCEEEEECCTTCCHHHHHHHHHHHHHHHHHC
T ss_pred EEcCCH-----HHHHHHHHHHHHC-CcEEEeeCCCCCCCCCceEEEEEeCCCCHHHHHHHHHHHHHHHHHh
Confidence 988631 1355666776554 999999988753 579999997 48999999999999988753
No 83
>1t3i_A Probable cysteine desulfurase; PLP-binding enzyme, transferase; HET: 2OS PLP; 1.80A {Synechocystis SP} SCOP: c.67.1.3
Probab=100.00 E-value=3.3e-36 Score=287.51 Aligned_cols=334 Identities=13% Similarity=0.203 Sum_probs=252.7
Q ss_pred CcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCC------CCCCCC--CCCcHHHHHHHHHHHhhhCCCCC-CCCcEE
Q 014936 34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEK------FNGYAP--TAGLPLTRRAIAEYLSRDLPYKL-TPNDVF 104 (415)
Q Consensus 34 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~------~~~y~~--~~g~~~lr~~ia~~~~~~~~~~~-~~~~i~ 104 (415)
++++++|+.|.+. +.++.+++++.+.+.... ...|++ ..+..++|+.++++++ . ++++++
T Consensus 26 g~~~i~l~~~~~~-----~~~~~v~~a~~~~~~~~~~~~~~~~~~y~~~~~~~~~~l~~~la~~~~------~~~~~~v~ 94 (420)
T 1t3i_A 26 GHPLVYLDNAATS-----QKPRAVLEKLMHYYENDNANVHRGAHQLSVRATDAYEAVRNKVAKFIN------ARSPREIV 94 (420)
T ss_dssp TEECEECBTTTCC-----CCCHHHHHHHHHHHHHTCCCC--CCSHHHHHHHHHHHHHHHHHHHHTT------CSCGGGEE
T ss_pred CCceEEecCCccC-----CCCHHHHHHHHHHHHhccCCCCcccchHHHHHHHHHHHHHHHHHHHcC------CCCCCeEE
Confidence 4568999999864 456889999998876421 123443 3567899999999983 3 568999
Q ss_pred EeCChHHHHHHHHHHh----cCCCCEEEEcCCCCcc----hHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceE
Q 014936 105 VTSGCTQAIDVAMALL----SRPGANILLPRPGFPI----YELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVA 176 (415)
Q Consensus 105 i~~g~~~al~~~~~~l----~~~gd~vi~~~p~y~~----~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 176 (415)
+|+|+++++.+++.++ .++||+|+++.|+|++ +...++..|.+++.++.+ .++.+|++++++++++++++
T Consensus 95 ~~~g~t~a~~~~~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~l~~~~~~ 172 (420)
T 1t3i_A 95 YTRNATEAINLVAYSWGMNNLKAGDEIITTVMEHHSNLVPWQMVAAKTGAVLKFVQLD--EQESFDLEHFKTLLSEKTKL 172 (420)
T ss_dssp EESSHHHHHHHHHHHTHHHHCCTTCEEEEETTCCGGGTHHHHHHHHHHCCEEEEECBC--TTSSBCHHHHHHHCCTTEEE
T ss_pred EcCChHHHHHHHHHHhhhcccCCCCEEEECcchhHHHHHHHHHHHHhcCcEEEEeccC--CCCCcCHHHHHHhhCCCceE
Confidence 9999999999999999 8999999999999998 456677889999998875 45668999999999888999
Q ss_pred EEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEE
Q 014936 177 LVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGW 256 (415)
Q Consensus 177 v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~ 256 (415)
|++++|+||||.+++ +++|.++|+++|+++|+|++|+.+... ..+..++ ..+++.|+||.++.+| +||
T Consensus 173 v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~D~a~~~~~~~----~~~~~~~---~di~~~s~sK~~~~~g--~G~ 240 (420)
T 1t3i_A 173 VTVVHISNTLGCVNP---AEEIAQLAHQAGAKVLVDACQSAPHYP----LDVQLID---CDWLVASGHKMCAPTG--IGF 240 (420)
T ss_dssp EEEESBCTTTCBBCC---HHHHHHHHHHTTCEEEEECTTTTTTSC----CCHHHHT---CSEEEEEGGGTTSCTT--CEE
T ss_pred EEEeCCcccccCcCC---HHHHHHHHHHcCCEEEEEhhhccCCcc----CchhhcC---CCEEEEehhhhcCCCc--eEE
Confidence 999999999999988 788889999999999999999874321 1222333 3488999999887777 899
Q ss_pred EEeeCCCCCCChHHHHHHHHhhcc---------------------ccCCchhHHHHHHHH-hhCCCcHHHHHHHHHHHHH
Q 014936 257 FVTTDPCGMFRKPKVVERMKKYFD---------------------ILGDPATFIQAAVPS-ILQQPDEVFFKKTLNLLKQ 314 (415)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~a~~~-~l~~~~~~~~~~~~~~~~~ 314 (415)
+++++ ++++.++.... +..+.+++.+.++.. +++...+.++++..+++++
T Consensus 241 ~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~ 312 (420)
T 1t3i_A 241 LYGKE--------EILEAMPPFFGGGEMIAEVFFDHFTTGELPHKFEAGTPAIAEAIALGAAVDYLTDLGMENIHNYEVE 312 (420)
T ss_dssp EEECH--------HHHHHSCCCSCSTTSEEEECSSCEEECCTTGGGCCSSCCHHHHHHHHHHHHHHHHHCHHHHHHHHHH
T ss_pred EEEch--------HHHhhcCceecCCCccccccccccCCCCchhhccCCCccHHHHHHHHHHHHHHHHhHHHHHHHHHHH
Confidence 99865 57766654321 112344455554333 4433222346788899999
Q ss_pred HHHHHHHHhhcCCCCcCCCCCC-----CceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCC--------CCCC
Q 014936 315 SVDICYNKIKEIPCISCPHKPE-----GSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAV--------GLKN 381 (415)
Q Consensus 315 ~~~~l~~~l~~~~~~~~~~~p~-----~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~--------~~~~ 381 (415)
+++++.+.|++++++.++ .|. .+.++++.++. .+..++.. .|.++||.+.||..| +.++
T Consensus 313 ~~~~l~~~L~~~~g~~~~-~~~~~~~~~~~~~~~~~~~------~~~~~~~~-~l~~~gi~v~~~~~~~~~~~~~~g~~~ 384 (420)
T 1t3i_A 313 LTHYLWQGLGQIPQLRLY-GPNPKHGDRAALASFNVAG------LHASDVAT-MVDQDGIAIRSGHHCTQPLHRLFDASG 384 (420)
T ss_dssp HHHHHHHHHHTCTTEEEE-SCCGGGSCBCSEEEEEETT------BCHHHHHH-HHHTTTEECBCSCTTCHHHHHHTTCCC
T ss_pred HHHHHHHHHHhCCCeEEe-CCCccccccCCEEEEEECC------CCHHHHHH-HHHHCCeEEeeccccchHHHHhcCCCC
Confidence 999999999998888733 453 25555656652 14556654 457789999998644 3368
Q ss_pred eEEEEee--CChhhHHHHHHHHHHHHHHH
Q 014936 382 WLRVTFA--VDPYSLEECLDRIKSFYQRH 408 (415)
Q Consensus 382 ~iRi~~~--~~~~~l~~~l~~l~~~~~~~ 408 (415)
++||+++ .++++++.++++|+++++.+
T Consensus 385 ~iRis~~~~~~~~~i~~~~~~l~~~~~~~ 413 (420)
T 1t3i_A 385 SARASLYFYNTKEEIDLFLQSLQATIRFF 413 (420)
T ss_dssp CEEEECCTTCCHHHHHHHHHHHHHHHHHT
T ss_pred eEEEecCCCCCHHHHHHHHHHHHHHHHHh
Confidence 9999996 48999999999999988764
No 84
>3tqx_A 2-amino-3-ketobutyrate coenzyme A ligase; energy metabolism, transferase; HET: PLP; 2.30A {Coxiella burnetii}
Probab=100.00 E-value=1.1e-35 Score=282.07 Aligned_cols=334 Identities=13% Similarity=0.094 Sum_probs=249.2
Q ss_pred CcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCC----C--CCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeC
Q 014936 34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEK----F--NGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTS 107 (415)
Q Consensus 34 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~----~--~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~ 107 (415)
++.++||+.++|- ++.+++.+.+++.+.+.... . ..|+...+..++++.++++++ . ++. ++++
T Consensus 42 g~~~id~~~~~~~---g~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~~------~-~~~-i~~~ 110 (399)
T 3tqx_A 42 EKEVLNFCANNYL---GLADHPALIKTAQTVVEQYGFGMASVRFICGTQTIHKELEKDISEFLG------T-DDT-ILYS 110 (399)
T ss_dssp TEEEEECSSCCTT---SCTTCHHHHHHHHHHHHHHCSCCCSCCCCCCCBHHHHHHHHHHHHHHT------C-SEE-EEES
T ss_pred CeeEEEeeccCcc---cccCCHHHHHHHHHHHHHhCCCCCCcCccccCchHHHHHHHHHHHHHC------C-CcE-EEEC
Confidence 4678999999642 24567899999988876411 1 112233446899999999883 2 244 4445
Q ss_pred ChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCC------CceEEEecC
Q 014936 108 GCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ------NTVALVIIN 181 (415)
Q Consensus 108 g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~------~~~~v~i~~ 181 (415)
+|++++..++.++.++||.|+++.|+|..+...++..|.++..++. .|++.+++.+++ +++++++++
T Consensus 111 sGt~a~~~~l~~~~~~gd~v~~~~~~~~~~~~~~~~~g~~~~~~~~-------~d~~~l~~~l~~~~~~~~~~~~v~~~~ 183 (399)
T 3tqx_A 111 SCFDANGGLFETLLGPEDAIISDELNHASIIDGIRLCKAQRYRYKN-------NAMGDLEAKLKEADEKGARFKLIATDG 183 (399)
T ss_dssp CHHHHHHTTHHHHCCTTCEEEEETTCCHHHHHHHHSCCSEEEEECT-------TCTTHHHHHHHHHHTTTCSSEEEEEES
T ss_pred chHHHHHHHHHHhcCCCCEEEECCcccHHHHHHHHHcCCceeEeCC-------CCHHHHHHHHHhhhccCCCceEEEEeC
Confidence 5688999999999999999999999999999999999999988875 467788877765 789999999
Q ss_pred CCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCC-CCCeEEEccCccccCCCCceEEEEEee
Q 014936 182 PGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS-TVPILTLGSLSKRWIVPGWRLGWFVTT 260 (415)
Q Consensus 182 p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~~~~G~r~G~~~~~ 260 (415)
|+||||.+++ +++|+++|+++|+++|+||+|+.+.++..........+. .+..++++|+||+++ |++.||++++
T Consensus 184 ~~nptG~~~~---l~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~di~~~s~sK~~~--g~~gG~~~~~ 258 (399)
T 3tqx_A 184 VFSMDGIIAD---LKSICDLADKYNALVMVDDSHAVGFIGENGRGTPEYCGVADRVDILTGTLGKALG--GASGGYTSGH 258 (399)
T ss_dssp EETTTTEECC---HHHHHHHHHHTTCEEEEECTTTTTTSSTTSCCHHHHHTCTTCCSEEEEESSSSSC--SSCCEEEEEC
T ss_pred CCCCCCCcCC---HHHHHHHHHHcCCEEEEECCccccccCCCCCchHHhhCCCCCCcEEEecchHhcc--cCceEEEEcC
Confidence 9999999988 889999999999999999999744333222222222221 234589999999987 4455999986
Q ss_pred CCCCCCChHHHHHHHHhhc---cccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCC
Q 014936 261 DPCGMFRKPKVVERMKKYF---DILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEG 337 (415)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~ 337 (415)
+ ++++.+.... ..+.+.++..+.++...++.. ..+.++.+++++++++++.+.|+++ ++. + .+..
T Consensus 259 ~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~-~~~~ 326 (399)
T 3tqx_A 259 K--------EIIEWLRNRSRPYLFSNTVAPVIVATSLKVLELL-KTEGPQLRKQLQENSRYFRAGMEKL-GFQ-L-VPGN 326 (399)
T ss_dssp H--------HHHHHHHHHCHHHHSSCCCCHHHHHHHHHHHHHH-HHTHHHHHHHHHHHHHHHHHHHHHH-TCC-B-CCCS
T ss_pred H--------HHHHHHHHhCcceeccCCCcHHHHHHHHHHHHHH-hhccHHHHHHHHHHHHHHHHHHHHc-CCC-c-CCCC
Confidence 5 6777776542 123466777777777777642 1457888999999999999999988 777 4 3556
Q ss_pred ceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCC---CCeEEEEee--CChhhHHHHHHHHHHHHHHH
Q 014936 338 SMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGL---KNWLRVTFA--VDPYSLEECLDRIKSFYQRH 408 (415)
Q Consensus 338 g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~---~~~iRi~~~--~~~~~l~~~l~~l~~~~~~~ 408 (415)
+.++|+.++.. .+..++...++ ++||.+.|+..+.. .+++|++++ .+++++++++++|+++++++
T Consensus 327 ~~~~~~~~~~~-----~~~~~~~~~l~-~~gi~v~~~~~~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~ 396 (399)
T 3tqx_A 327 HPIIPVMLGDA-----QLATNMADHLL-QEGIYVVGFSYPVVPMGKARIRVQMSAVHTQQQLDRAIEAFGQVGKKL 396 (399)
T ss_dssp SSEEEEEEECH-----HHHHHHHHHHH-HTTEECCEECTTTSCTTCEEEEEECCTTCCHHHHHHHHHHHHHHHHHT
T ss_pred CCEEEEEeCCH-----HHHHHHHHHHH-HCCCEEeeeCCCCCCCCCceEEEEeecCCCHHHHHHHHHHHHHHHHHh
Confidence 77888877532 13456667665 46999998765532 469999995 68999999999999988753
No 85
>1vjo_A Alanine--glyoxylate aminotransferase; 17130350, ALR1004, STR genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: PLP; 1.70A {Nostoc SP} SCOP: c.67.1.3
Probab=100.00 E-value=7.3e-36 Score=282.69 Aligned_cols=319 Identities=13% Similarity=0.137 Sum_probs=248.0
Q ss_pred CCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCC-cEEEeCChHHHHHHHHHHhcCCCCEEEE
Q 014936 51 FHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPN-DVFVTSGCTQAIDVAMALLSRPGANILL 129 (415)
Q Consensus 51 ~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~-~i~i~~g~~~al~~~~~~l~~~gd~vi~ 129 (415)
.++++.+.+++.+.+.. .|++. ..++++.+++++.+.+| ++++ ++++|+|+++++..++.++.++||+|++
T Consensus 43 ~~~~~~v~~a~~~~~~~----~~~~~--~~~~~~~~~~~la~~~g--~~~~~~v~~t~g~t~al~~~~~~~~~~gd~Vl~ 114 (393)
T 1vjo_A 43 SNAHPSVLQAMNVSPVG----HLDPA--FLALMDEIQSLLRYVWQ--TENPLTIAVSGTGTAAMEATIANAVEPGDVVLI 114 (393)
T ss_dssp CCCCHHHHHHHSSCCCC----TTSHH--HHHHHHHHHHHHHHHHT--CCCSCEEEESSCHHHHHHHHHHHHCCTTCEEEE
T ss_pred CCCCHHHHHHHhccccc----ccCHH--HHHHHHHHHHHHHHHhC--CCCCcEEEEeCchHHHHHHHHHhccCCCCEEEE
Confidence 45678888888766542 45432 45777777777777666 3567 8999999999999999999999999999
Q ss_pred cCCCCcc--hHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCC-CceEEEecCCCCccccCCCHHHHHHHHHHHhhcC
Q 014936 130 PRPGFPI--YELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ-NTVALVIINPGNPCGNVYSYQHLQKLAETANKLK 206 (415)
Q Consensus 130 ~~p~y~~--~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~ 206 (415)
+.|+|++ +...++..|.++..++.+. ++.+|+++|++.+++ +++++++++|+||||.+++ +++|+++|+++|
T Consensus 115 ~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~ 189 (393)
T 1vjo_A 115 GVAGYFGNRLVDMAGRYGADVRTISKPW--GEVFSLEELRTALETHRPAILALVHAETSTGARQP---LEGVGELCREFG 189 (393)
T ss_dssp EESSHHHHHHHHHHHHTTCEEEEEECCT--TCCCCHHHHHHHHHHHCCSEEEEESEETTTTEECC---CTTHHHHHHHHT
T ss_pred EcCChhHHHHHHHHHHcCCceEEEecCC--CCCCCHHHHHHHHhhCCceEEEEeccCCCcceecc---HHHHHHHHHHcC
Confidence 9999998 8888999999999998754 456899999999987 7899999999999999976 678888899999
Q ss_pred cEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhh------c-
Q 014936 207 TLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKY------F- 279 (415)
Q Consensus 207 ~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~------~- 279 (415)
+++|+||+|+.. .....+. ..+..+++.|+||+++.+| |+||+++++ ++++.++.. .
T Consensus 190 ~~li~Dea~~~g----~~~~~~~---~~~~di~~~s~sK~l~~~~-~~G~l~~~~--------~~~~~~~~~~~~~~~~~ 253 (393)
T 1vjo_A 190 TLLLVDTVTSLG----GVPIFLD---AWGVDLAYSCSQKGLGCSP-GASPFTMSS--------RAIEKLQRRRTKVANWY 253 (393)
T ss_dssp CEEEEECTTTTT----TSCCCTT---TTTCSEEECCSSSTTCSCS-SCEEEEECH--------HHHHHHHTCSSCCSCST
T ss_pred CEEEEECCcccc----CcCCccc---ccCccEEEEcCcccccCCC-ceEEEEECH--------HHHHHHhccCCCCCcee
Confidence 999999999942 1122222 2234588999999988888 999999965 566666421 0
Q ss_pred -------------cccC-CchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCC---ceEEE
Q 014936 280 -------------DILG-DPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEG---SMAVM 342 (415)
Q Consensus 280 -------------~~~~-~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~---g~~~~ 342 (415)
.... +++++.+.++..+|+...+.++++.+++++++++++.+.|+++ ++. +..|.+ +.+++
T Consensus 254 ~~~~~~~~~~~~~~~~~g~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~~~~~~~~~~~ 331 (393)
T 1vjo_A 254 LDMNLLGKYWGSERVYHHTAPINLYYALREALRLIAQEGLANCWQRHQKNVEYLWERLEDI-GLS-LHVEKEYRLPTLTT 331 (393)
T ss_dssp TCHHHHHHHHSTTCCCCSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCC-BSSCGGGBCSSEEE
T ss_pred cCcHhhhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHc-CCc-ccCCccccCCcEEE
Confidence 1122 6788888888888865333457788999999999999999988 777 435543 35677
Q ss_pred EecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEe-e--CChhhHHHHHHHHHHHH
Q 014936 343 LKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTF-A--VDPYSLEECLDRIKSFY 405 (415)
Q Consensus 343 ~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~-~--~~~~~l~~~l~~l~~~~ 405 (415)
+.++.. .+..++...+++++||.+.||..|..++++||++ + .+++++++++++|++++
T Consensus 332 ~~~~~~-----~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~~~~~~~~~i~~~~~~l~~~l 392 (393)
T 1vjo_A 332 VCIPDG-----VDGKAVARRLLNEHNIEVGGGLGELAGKVWRVGLMGFNSRKESVDQLIPALEQVL 392 (393)
T ss_dssp EECCTT-----CCHHHHHHHHHHHHCEECEECCGGGTTTEEEEECCGGGCSHHHHHHHHHHHHHHH
T ss_pred EEcCCC-----CCHHHHHHHHHhhCCEEEecCccccCCCEEEEeCCccCChHHHHHHHHHHHHHHh
Confidence 777531 2466777777655599999999877789999995 3 46778999999998875
No 86
>1kmj_A Selenocysteine lyase; persulfide perselenide NIFS pyridoxal phosphate, structural PSI, protein structure initiative; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.3 PDB: 1i29_A* 1jf9_A* 1kmk_A* 1c0n_A*
Probab=100.00 E-value=8.9e-36 Score=283.23 Aligned_cols=333 Identities=13% Similarity=0.140 Sum_probs=249.8
Q ss_pred CcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCC--CCC------CCCCCCcHHHHHHHHHHHhhhCCCCC-CCCcEE
Q 014936 34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEK--FNG------YAPTAGLPLTRRAIAEYLSRDLPYKL-TPNDVF 104 (415)
Q Consensus 34 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~--~~~------y~~~~g~~~lr~~ia~~~~~~~~~~~-~~~~i~ 104 (415)
++++++|+.+.+. +.++.+.+++.+.+.... ... |.+..+..++|+.+++++ +. ++++|+
T Consensus 21 g~~~i~l~~~~~~-----~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~------~~~~~~~v~ 89 (406)
T 1kmj_A 21 GLPLAYLDSAASA-----QKPSQVIDAEAEFYRHGYAAVHRGIHTLSAQATEKMENVRKRASLFI------NARSAEELV 89 (406)
T ss_dssp TEECEECCTTTCC-----CCCHHHHHHHHHHHHHTCCCCSSCSSHHHHHHHHHHHHHHHHHHHHT------TCSCGGGEE
T ss_pred CCceEEecCCccC-----CCCHHHHHHHHHHHHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHc------CCCCCCeEE
Confidence 4578999999864 356889999999886421 111 223456789999999998 33 578999
Q ss_pred EeCChHHHHHHHHHHh----cCCCCEEEEcCCCCcchH----HHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceE
Q 014936 105 VTSGCTQAIDVAMALL----SRPGANILLPRPGFPIYE----LSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVA 176 (415)
Q Consensus 105 i~~g~~~al~~~~~~l----~~~gd~vi~~~p~y~~~~----~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 176 (415)
+|+|+++++.+++.++ .++||+|+++.|+|++.. ..++..|.++..++.+. ++.+|+++|++++++++++
T Consensus 90 ~~~g~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~--~~~~d~~~l~~~l~~~~~~ 167 (406)
T 1kmj_A 90 FVRGTTEGINLVANSWGNSNVRAGDNIIISQMEHHANIVPWQMLCARVGAELRVIPLNP--DGTLQLETLPTLFDEKTRL 167 (406)
T ss_dssp EESSHHHHHHHHHHHTHHHHCCTTCEEEEETTCCGGGTHHHHHHHHHHTCEEEEECBCT--TSCBCGGGHHHHCCTTEEE
T ss_pred EeCChhHHHHHHHHHhhhhcCCCCCEEEEecccchHHHHHHHHHHHhCCCEEEEEecCC--CCCcCHHHHHHHhccCCeE
Confidence 9999999999999999 899999999999998653 34667899999998753 4568999999999888999
Q ss_pred EEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEE
Q 014936 177 LVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGW 256 (415)
Q Consensus 177 v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~ 256 (415)
|++++|+||||.+++ +++|+++|+++|+++|+|++|+.+.. ...+... +..+++.|+||.++.+| +||
T Consensus 168 v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~D~~~~~g~~----~~~~~~~---~~d~~~~s~~K~~g~~G--~G~ 235 (406)
T 1kmj_A 168 LAITHVSNVLGTENP---LAEMITLAHQHGAKVLVDGAQAVMHH----PVDVQAL---DCDFYVFSGHKLYGPTG--IGI 235 (406)
T ss_dssp EEEESBCTTTCCBCC---HHHHHHHHHHTTCEEEEECTTTTTTS----CCCHHHH---TCSEEEEEGGGTTSCTT--CEE
T ss_pred EEEeCCCccccCcCC---HHHHHHHHHHcCCEEEEEchhhcCCC----CCccccc---CCCEEEEEchhccCCCC--cEE
Confidence 999999999999988 88889999999999999999987432 1122222 24588999999988778 899
Q ss_pred EEeeCCCCCCChHHHHHHHHhhcc----------------------ccCCchhHHHHHHH-HhhCCCcHHHHHHHHHHHH
Q 014936 257 FVTTDPCGMFRKPKVVERMKKYFD----------------------ILGDPATFIQAAVP-SILQQPDEVFFKKTLNLLK 313 (415)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~----------------------~~~~~~~~~~~a~~-~~l~~~~~~~~~~~~~~~~ 313 (415)
+++++ ++++.+..... +..+.+++.+.++. .+++...+.++++..++++
T Consensus 236 ~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~ 307 (406)
T 1kmj_A 236 LYVKE--------ALLQEMPPWEGGGSMIATVSLSEGTTWTKAPWRFEAGTPNTGGIIGLGAALEYVSALGLNNIAEYEQ 307 (406)
T ss_dssp EEECH--------HHHHHCCCSSCSTTSEEEEETTTEEEECCTTGGGCCSSCCHHHHHHHHHHHHHHHHHCHHHHHHHHH
T ss_pred EEEeH--------HHHhhcCCcccCCCceeecccccccccCCCchhccCCCCCHHHHHHHHHHHHHHHHcCHHHHHHHHH
Confidence 99864 56666654321 11223445554433 4554322235678889999
Q ss_pred HHHHHHHHHhhcCCCCcCCCCC--CCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCC--------CCCCeE
Q 014936 314 QSVDICYNKIKEIPCISCPHKP--EGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAV--------GLKNWL 383 (415)
Q Consensus 314 ~~~~~l~~~l~~~~~~~~~~~p--~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~--------~~~~~i 383 (415)
++++++.+.|+++|++. +..| .+++ +++.++. .+..++... |.++||.+.||..| +.++++
T Consensus 308 ~~~~~l~~~L~~~~~~~-~~~~~~~~~~-~~~~~~~------~~~~~~~~~-l~~~gi~v~~g~~~~~~~~~~~g~~~~i 378 (406)
T 1kmj_A 308 NLMHYALSQLESVPDLT-LYGPQNRLGV-IAFNLGK------HHAYDVGSF-LDNYGIAVRTGHHCAMPLMAYYNVPAMC 378 (406)
T ss_dssp HHHHHHHHHHTTSTTEE-EESCTTCCSE-EEEEETT------CCHHHHHHH-HHHTTEECEEECTTCHHHHHHTTCSCEE
T ss_pred HHHHHHHHHHhcCCCeE-EecCCCcCCE-EEEEECC------CCHHHHHHH-HhhCCcEEEeccccchHHHHhcCCCCeE
Confidence 99999999999988887 4355 4554 4445642 145566654 56779999998754 336899
Q ss_pred EEEee--CChhhHHHHHHHHHHHHHHH
Q 014936 384 RVTFA--VDPYSLEECLDRIKSFYQRH 408 (415)
Q Consensus 384 Ri~~~--~~~~~l~~~l~~l~~~~~~~ 408 (415)
||+++ +++++++.+++.|+++++.+
T Consensus 379 Ris~~~~~t~~~i~~~~~~l~~~~~~l 405 (406)
T 1kmj_A 379 RASLAMYNTHEEVDRLVTGLQRIHRLL 405 (406)
T ss_dssp EEECCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred EEEeecCCCHHHHHHHHHHHHHHHHhh
Confidence 99996 48999999999999887653
No 87
>2dr1_A PH1308 protein, 386AA long hypothetical serine aminotransferase; PLP, structural genomics, NPPSFA; HET: PLP; 1.90A {Pyrococcus horikoshii}
Probab=100.00 E-value=3.2e-35 Score=277.58 Aligned_cols=325 Identities=14% Similarity=0.120 Sum_probs=251.8
Q ss_pred CCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEc
Q 014936 51 FHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLP 130 (415)
Q Consensus 51 ~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~ 130 (415)
.+.++.+.+++.+.+. ..|++. ..++++.+++++.+.+|.. +++++++|+|+++++..++.++.++||+|+++
T Consensus 29 ~~~~~~v~~a~~~~~~----~~~~~~--~~~~~~~~~~~la~~~g~~-~~~~v~~~~g~t~a~~~~~~~l~~~gd~vl~~ 101 (386)
T 2dr1_A 29 VACFPEVLEIMKVQMF----SHRSKE--YRKVHMDTVERLREFLEVE-KGEVLLVPSSGTGIMEASIRNGVSKGGKVLVT 101 (386)
T ss_dssp CCCCHHHHHHTTSCCC----CTTSHH--HHHHHHHHHHHHHHHHTCS-SSEEEEESSCHHHHHHHHHHHHSCTTCEEEEE
T ss_pred cCCcHHHHHHHhcccc----cccCHH--HHHHHHHHHHHHHHHhCCC-CCcEEEEeCChHHHHHHHHHHhhcCCCeEEEE
Confidence 3557888887766543 245432 3678888888887777754 46789999999999999999999999999999
Q ss_pred CCCCcc--hHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhc--CCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcC
Q 014936 131 RPGFPI--YELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLA--DQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLK 206 (415)
Q Consensus 131 ~p~y~~--~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~ 206 (415)
.|+|++ +...++..|++++.++.+. ++.+|+++|++++ .++++++++++|+||||.+.+ +++|+++|+++|
T Consensus 102 ~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~l~~~~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~ 176 (386)
T 2dr1_A 102 IIGAFGKRYKEVVESNGRKAVVLEYEP--GKAVKPEDLDDALRKNPDVEAVTITYNETSTGVLNP---LPELAKVAKEHD 176 (386)
T ss_dssp ESSHHHHHHHHHHHHTTCEEEEEECCT--TCCCCHHHHHHHHHHCTTCCEEEEESEETTTTEECC---HHHHHHHHHHTT
T ss_pred cCCchhHHHHHHHHHhCCceEEEecCC--CCCCCHHHHHHHHhcCCCCcEEEEEeecCCcchhCC---HHHHHHHHHHcC
Confidence 999998 8888899999999998754 4568999999988 467899999999999999965 788899999999
Q ss_pred cEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHH----------
Q 014936 207 TLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMK---------- 276 (415)
Q Consensus 207 ~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~---------- 276 (415)
+++|+|++|+.+.+. .++..+ +..++++|+||+++.++ ++||+++++ ++++.+.
T Consensus 177 ~~li~D~a~~~~~~~----~~~~~~---~~di~~~s~sK~~~~~~-g~G~~~~~~--------~~~~~~~~~~~~~~~~~ 240 (386)
T 2dr1_A 177 KLVFVDAVSAMGGAD----IKFDKW---GLDVVFSSSQKAFGVPP-GLAIGAFSE--------RFLEIAEKMPERGWYFD 240 (386)
T ss_dssp CEEEEECTTTBTTBC----CCTTTT---TCSEEEEETTSTTCCCS-SCEEEEECH--------HHHHHHTTCTTCCSTTC
T ss_pred CeEEEEccccccCcc----cccccc---CCcEEEEeccccccCCC-ceEEEEECH--------HHHHHHhcCCCCceEEe
Confidence 999999999975532 122222 34589999999987662 389999965 5655552
Q ss_pred ------hh---ccccCCchhHHHHHHHHhhCCCcHH-HHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCC---CceEEEE
Q 014936 277 ------KY---FDILGDPATFIQAAVPSILQQPDEV-FFKKTLNLLKQSVDICYNKIKEIPCISCPHKPE---GSMAVML 343 (415)
Q Consensus 277 ------~~---~~~~~~~~~~~~~a~~~~l~~~~~~-~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~---~g~~~~~ 343 (415)
.. ....+++++..+.++..+|+...+. .+++.+++++++++++.+.|+++ ++. +..|. .+.++|+
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~~~~~~~~~~~~ 318 (386)
T 2dr1_A 241 IPLYVKYLKEKESTPSTPPMPQVFGINVALRIIEKMGGKEKWLEMYEKRAKMVREGVREI-GLD-ILAEPGHESPTITAV 318 (386)
T ss_dssp HHHHHHHHHHHSSCSSCCCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHT-TCC-BSSCTTCBCSSEEEE
T ss_pred HHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHc-CCe-eCcCccccCCceEEE
Confidence 11 1224567888888888888642222 36788899999999999999988 777 33453 4778888
Q ss_pred ecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEee--CChhhHHHHHHHHHHHHHHHHHH
Q 014936 344 KLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFA--VDPYSLEECLDRIKSFYQRHAKQ 411 (415)
Q Consensus 344 ~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~--~~~~~l~~~l~~l~~~~~~~~~~ 411 (415)
.++.. .+..++...++++ ||.+.||..+...+++||+++ .+++++++++++|+++++++..+
T Consensus 319 ~~~~~-----~~~~~~~~~l~~~-gi~v~~~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~~~~ 382 (386)
T 2dr1_A 319 LTPPG-----IKGDEVYEAMRKR-GFELAKGYGSVKEKTFRIGHMGYMKFEDIQEMLDNLREVINELKKQ 382 (386)
T ss_dssp ECCTT-----CCHHHHHHHHHHT-TEECEECCGGGTTTEEEEECCSSCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred EcCCC-----CCHHHHHHHHHHC-CeEEecCccccCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHcCCC
Confidence 88631 2466777777655 999999987656789999996 68999999999999998876543
No 88
>1bs0_A Protein (8-amino-7-oxonanoate synthase); PLP-dependent acyl-COA synthase, biotin biosynthesis, 8-AMIN oxonanoate synthase; 1.65A {Escherichia coli} SCOP: c.67.1.4 PDB: 2g6w_A* 1dje_A* 1dj9_A*
Probab=100.00 E-value=3.5e-35 Score=277.21 Aligned_cols=329 Identities=12% Similarity=0.086 Sum_probs=246.8
Q ss_pred CcceeEecccCCCCCCCCCCcHHHHHHHHHHHhc-CC---CCCC--CCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeC
Q 014936 34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLS-EK---FNGY--APTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTS 107 (415)
Q Consensus 34 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~-~~---~~~y--~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~ 107 (415)
++.++||+.|.+ .++++++.+++++.+.+.. +. ...| +...+..++|+.+++++ +++ +.++++
T Consensus 38 g~~~id~~~~~~---~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~------g~~--~~i~~~ 106 (384)
T 1bs0_A 38 DRQYLNFSSNDY---LGLSHHPQIIRAWQQGAEQFGIGSGGSGHVSGYSVVHQALEEELAEWL------GYS--RALLFI 106 (384)
T ss_dssp TEEEEECSCCCT---TSGGGCHHHHHHHHHHHHHHCSCCCSBTTTTCCCHHHHHHHHHHHHHH------TCS--EEEEES
T ss_pred CceEEEeeccCc---cCCCCCHHHHHHHHHHHHHhCCCCCCcCcccCChHHHHHHHHHHHHHh------CCC--cEEEeC
Confidence 567899999874 2345689999999988764 21 1123 44567889999999998 332 455555
Q ss_pred ChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCC---ceEEEecCCCC
Q 014936 108 GCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQN---TVALVIINPGN 184 (415)
Q Consensus 108 g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~---~~~v~i~~p~n 184 (415)
+|++++..++.++.++||.|+++.|+|..+...++..|.+++.++. .|+++|++.+++. ++++++++|+|
T Consensus 107 sGt~a~~~~~~~~~~~gd~v~~~~~~~~~~~~~~~~~g~~~~~~~~-------~d~~~l~~~l~~~~~~~~~v~~~~~~n 179 (384)
T 1bs0_A 107 SGFAANQAVIAAMMAKEDRIAADRLSHASLLEAASLSPSQLRRFAH-------NDVTHLARLLASPCPGQQMVVTEGVFS 179 (384)
T ss_dssp CHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHHTSSSEEEEECT-------TCHHHHHHHHHSCCSSCEEEEEESBCT
T ss_pred CcHHHHHHHHHHhCCCCcEEEEcccccHHHHHHHHHcCCCEEEeCC-------CCHHHHHHHHHhcCCCCeEEEEeCCCC
Confidence 5589999999999999999999999999999999999999988874 4788998887643 67888899999
Q ss_pred ccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCC
Q 014936 185 PCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCG 264 (415)
Q Consensus 185 ptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~ 264 (415)
|||.+++ +++|+++|+++|+++|+||+|+.+.++.........++.. ..++++|+||+++++| ||+++++
T Consensus 180 ptG~~~~---l~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~-~di~~~s~sK~~~~~G---G~~~~~~--- 249 (384)
T 1bs0_A 180 MDGDSAP---LAEIQQVTQQHNGWLMVDDAHGTGVIGEQGRGSCWLQKVK-PELLVVTFGKGFGVSG---AAVLCSS--- 249 (384)
T ss_dssp TTCCBCC---HHHHHHHHHHTTCEEEEECTTTTTTSSGGGCCHHHHTTCC-CSEEEEESSSTTSSCC---EEEEECH---
T ss_pred CCCCccC---HHHHHHHHHHcCcEEEEECCcccceecCCCCchHHhcCCC-CcEEEeeccchhhccC---cEEEeCH---
Confidence 9999987 7788999999999999999998765431111111222221 2388999999998777 9999864
Q ss_pred CCChHHHHHHHHhhc-c--ccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEE
Q 014936 265 MFRKPKVVERMKKYF-D--ILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAV 341 (415)
Q Consensus 265 ~~~~~~~~~~~~~~~-~--~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~ 341 (415)
++++.+.... . .+.+.+++.+.++.++++...+.+.++..++++++++++.+.|+++ ++. + .+..++++
T Consensus 250 -----~~~~~l~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~-~~~~~~~~ 321 (384)
T 1bs0_A 250 -----TVADYLLQFARHLIYSTSMPPAQAQALRASLAVIRSDEGDARREKLAALITRFRAGVQDL-PFT-L-ADSCSAIQ 321 (384)
T ss_dssp -----HHHHHHHHHCHHHHSSBCCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTS-SCE-E-CSCCSSBC
T ss_pred -----HHHHHHHHhchhhhcCCCCCHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHhc-CCc-c-cCCCCCEE
Confidence 6777776542 1 2235788888887777754211156788899999999999999988 676 4 35667788
Q ss_pred EEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCC---CCeEEEEee--CChhhHHHHHHHHHHH
Q 014936 342 MLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGL---KNWLRVTFA--VDPYSLEECLDRIKSF 404 (415)
Q Consensus 342 ~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~---~~~iRi~~~--~~~~~l~~~l~~l~~~ 404 (415)
|+.++.. .+..++...++ ++||.+.|+..|+. .+++||+++ ++++++++++++|+++
T Consensus 322 ~~~~~~~-----~~~~~l~~~l~-~~gi~v~~~~~~~~~~~~~~~Ri~~~~~~~~~~i~~~~~~l~~~ 383 (384)
T 1bs0_A 322 PLIVGDN-----SRALQLAEKLR-QQGCWVTAIRPPTVPAGTARLRLTLTAAHEMQDIDRLLEVLHGN 383 (384)
T ss_dssp CEEEESH-----HHHHHHHHHHH-HTTEECCEECTTSSCTTCEEECCBCCTTCCHHHHHHHHHHHHHH
T ss_pred EEEeCCH-----HHHHHHHHHHH-HCCcEEEeecCCCCCCCCceEEEEEcCCCCHHHHHHHHHHHHhh
Confidence 8877521 13456666665 55999999987753 378999996 3899999999998764
No 89
>2w8t_A SPT, serine palmitoyltransferase; HET: LLP; 1.25A {Sphingomonas paucimobilis} PDB: 2w8u_A* 2w8w_A* 2xbn_A* 2w8j_A* 2w8v_A* 2jg2_A* 2jgt_A 2x8u_A*
Probab=100.00 E-value=9.6e-35 Score=277.80 Aligned_cols=335 Identities=14% Similarity=0.095 Sum_probs=249.8
Q ss_pred cCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhc-CC-CCCCCCC----CCcHHHHHHHHHHHhhhCCCCCCCCcEEEe
Q 014936 33 NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLS-EK-FNGYAPT----AGLPLTRRAIAEYLSRDLPYKLTPNDVFVT 106 (415)
Q Consensus 33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~-~~-~~~y~~~----~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~ 106 (415)
+++.++||+.|++ .++.+++.+++++.+.+.. +. ...|... ....++++.++++++ . ++.+++
T Consensus 62 ~g~~~id~~~~~~---lg~~~~~~v~~a~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~la~~~g------~--~~~i~~ 130 (427)
T 2w8t_A 62 RGKDTILLGTYNY---MGMTFDPDVIAAGKEALEKFGSGTCGSRMLNGTFHDHMEVEQALRDFYG------T--TGAIVF 130 (427)
T ss_dssp TTEEEEECSCCCT---TCGGGCHHHHHHHHHHHHHHCSCCCSCTTTTCCCHHHHHHHHHHHHHHT------C--SEEEEE
T ss_pred CCceEEEEECccc---ccCCCCHHHHHHHHHHHHHhCCCCcccccccCCcHHHHHHHHHHHHHhC------C--CceEEe
Confidence 3567899999973 2345789999999988764 21 2223223 334788888888872 2 366777
Q ss_pred CChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCC----CceEEEecCC
Q 014936 107 SGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ----NTVALVIINP 182 (415)
Q Consensus 107 ~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~----~~~~v~i~~p 182 (415)
++|++++..++.++.++||.|+++.|+|.++...++..|.+++.++. .|+++|++.+++ ++++|++++|
T Consensus 131 ~sGs~a~~~al~~l~~~gd~vl~~~~~h~~~~~~~~~~g~~~~~~~~-------~d~~~le~~l~~~~~~~~~~v~~~~~ 203 (427)
T 2w8t_A 131 STGYMANLGIISTLAGKGEYVILDADSHASIYDGCQQGNAEIVRFRH-------NSVEDLDKRLGRLPKEPAKLVVLEGV 203 (427)
T ss_dssp SCHHHHHHHHHHHHSCTTCEEEEETTCCHHHHHHHHHSCSEEEEECT-------TCHHHHHHHHHTSCSSSCEEEEEESE
T ss_pred cCcHHHHHHHHHHhcCCCCEEEECCcccHHHHHHHHHcCCeeEEeCC-------CCHHHHHHHHHhccCCCCeEEEEcCC
Confidence 77788999999999999999999999999999999999999988764 589999988865 6789999999
Q ss_pred CCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCC-CCCeEEEccCccccCCCCceEEEEEeeC
Q 014936 183 GNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS-TVPILTLGSLSKRWIVPGWRLGWFVTTD 261 (415)
Q Consensus 183 ~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~~~~G~r~G~~~~~~ 261 (415)
+||||.+++ +++|+++|+++|+++|+||+|+.+.++..+......++. .+.+++++||||+++++| ||+++++
T Consensus 204 ~n~tG~~~~---l~~l~~l~~~~g~~li~Dea~~~~~~~~~g~~~~~~~~~~~~~di~~~s~sK~~g~~g---G~v~~~~ 277 (427)
T 2w8t_A 204 YSMLGDIAP---LKEMVAVAKKHGAMVLVDEAHSMGFFGPNGRGVYEAQGLEGQIDFVVGTFSKSVGTVG---GFVVSNH 277 (427)
T ss_dssp ETTTTEECC---HHHHHHHHHHTTCEEEEECTTTTTTSSTTSCCHHHHTTCTTCCSEEEEESSSTTCSCC---EEEEECC
T ss_pred CCCCCCccC---HHHHHHHHHHcCCEEEEECCccccccCCCCCchHhhcCCCcCCcEEEecchhhhccCC---CEEEeCH
Confidence 999999987 888899999999999999999998775322222211221 234689999999998777 9999865
Q ss_pred CCCCCChHHHHHHHHhh---ccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCC-C
Q 014936 262 PCGMFRKPKVVERMKKY---FDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPE-G 337 (415)
Q Consensus 262 ~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~-~ 337 (415)
++++.+... ...+.+.++..+.++.++|+.. ..+++.+++++++++++.+.|+++ ++. +..+. .
T Consensus 278 --------~l~~~l~~~~~~~~~~~~~~~~~~aa~~~al~~~--~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~~~~ 345 (427)
T 2w8t_A 278 --------PKFEAVRLACRPYIFTASLPPSVVATATTSIRKL--MTAHEKRERLWSNARALHGGLKAM-GFR-LGTETCD 345 (427)
T ss_dssp --------TTGGGGGGTCHHHHSSCCCCHHHHHHHHHHHHHH--TSCHHHHHHHHHHHHHHHHHHHHH-TCE-ESCSSCC
T ss_pred --------HHHHHHHHhcccccccCCCCHHHHHHHHHHHHHH--hcCHHHHHHHHHHHHHHHHHHHHc-CCc-ccCCCCC
Confidence 344444433 1123456777777766676532 124678889999999999999987 776 33233 5
Q ss_pred ceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCC---CCeEEEEee--CChhhHHHHHHHHHHHHHHHH
Q 014936 338 SMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGL---KNWLRVTFA--VDPYSLEECLDRIKSFYQRHA 409 (415)
Q Consensus 338 g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~---~~~iRi~~~--~~~~~l~~~l~~l~~~~~~~~ 409 (415)
+.++|+.++.. .+..++...++ ++||.+.|+..|+. .+++|++++ +++++++.++++|+++++++.
T Consensus 346 ~~~~~~~~~~~-----~~~~~l~~~L~-~~Gi~v~~~~~~~~~~~~~~lRi~~~~~~t~e~i~~~~~~l~~~l~~~~ 416 (427)
T 2w8t_A 346 SAIVAVMLEDQ-----EQAAMMWQALL-DGGLYVNMARPPATPAGTFLLRCSICAEHTPAQIQTVLGMFQAAGRAVG 416 (427)
T ss_dssp SSEEEEEESSH-----HHHHHHHHHHH-HTTEECEEECTTTSCTTCEEEEEECCTTCCHHHHHHHHHHHHHHHHHHT
T ss_pred CCEEEEEECCH-----HHHHHHHHHHH-HCCeEEeeeCCCCCCCCCeEEEEEeCCCCCHHHHHHHHHHHHHHHHHhC
Confidence 67888888531 12456666665 45999999987764 368999996 489999999999999987643
No 90
>1eg5_A Aminotransferase; PLP-dependent enzymes, iron-sulfur-cluster synthesis, C-S BE transferase; HET: PLP; 2.00A {Thermotoga maritima} SCOP: c.67.1.3 PDB: 1ecx_A*
Probab=100.00 E-value=3.5e-35 Score=277.01 Aligned_cols=331 Identities=12% Similarity=0.085 Sum_probs=244.0
Q ss_pred eEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCC-------CCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChH
Q 014936 38 ISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFN-------GYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCT 110 (415)
Q Consensus 38 i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~-------~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~ 110 (415)
+.|+.+.. .++++.+++++.+.+...... .|....+..++++.+++++ +++++++++|+|++
T Consensus 3 ~yld~~~~-----~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~------g~~~~~v~~~~g~t 71 (384)
T 1eg5_A 3 VYFDNNAT-----TRVDDRVLEEMIVFYREKYGNPNSAHGMGIEANLHMEKAREKVAKVL------GVSPSEIFFTSCAT 71 (384)
T ss_dssp EECBTTTC-----CCCCHHHHHHHHHHHHTCCCCTTCSSHHHHHHHHHHHHHHHHHHHHH------TSCGGGEEEESCHH
T ss_pred EEEecCcc-----CCCCHHHHHHHHHHHHhcCCCCccccHHHHHHHHHHHHHHHHHHHHc------CCCCCeEEEECCHH
Confidence 44555542 356899999999988642100 1222345688999999998 46778999999999
Q ss_pred HHHHHHHHHhc----CCCCEEEEcCCCCcchHHHH---HhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCC
Q 014936 111 QAIDVAMALLS----RPGANILLPRPGFPIYELSA---AFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPG 183 (415)
Q Consensus 111 ~al~~~~~~l~----~~gd~vi~~~p~y~~~~~~~---~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~ 183 (415)
+++..++.++. ++||+|+++.|+|+++...+ +..|.+++.++.++ ++.+|+++|++.++++++++++++|+
T Consensus 72 ~a~~~~~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~~~~~v~~~~~~ 149 (384)
T 1eg5_A 72 ESINWILKTVAETFEKRKRTIITTPIEHKAVLETMKYLSMKGFKVKYVPVDS--RGVVKLEELEKLVDEDTFLVSIMAAN 149 (384)
T ss_dssp HHHHHHHHHHHHHTTTTCCEEEECTTSCHHHHHHHHHHHHTTCEEEECCBCT--TSCBCHHHHHHHCCTTEEEEEEESBC
T ss_pred HHHHHHHHhhhhhccCCCCEEEECCCCchHHHHHHHHHHhcCCEEEEEccCC--CCccCHHHHHHHhCCCCeEEEEECCC
Confidence 99999999998 79999999999999876655 67899999988753 46689999999998889999999999
Q ss_pred CccccCCCHHHHHHHHHHHhhcC--cEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeC
Q 014936 184 NPCGNVYSYQHLQKLAETANKLK--TLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTD 261 (415)
Q Consensus 184 nptG~~~~~~~l~~i~~~~~~~~--~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~ 261 (415)
||||.+++ +++|.++|+++| +++|+||+|+... ....+..+ +..+++.|+||.++++| +||+++++
T Consensus 150 nptG~~~~---~~~i~~l~~~~~~~~~li~Dea~~~~~----~~~~~~~~---~~di~~~s~sK~~g~~G--~G~~~~~~ 217 (384)
T 1eg5_A 150 NEVGTIQP---VEDVTRIVKKKNKETLVHVDAVQTIGK----IPFSLEKL---EVDYASFSAHKFHGPKG--VGITYIRK 217 (384)
T ss_dssp TTTCBBCC---HHHHHHHHHHHCTTCEEEEECTTTTTT----SCCCCTTT---CCSEEEEEGGGGTSCTT--CEEEEECT
T ss_pred CCcccccC---HHHHHHHHHhcCCceEEEEEhhhhcCC----cccCchhc---CCCEEEecHHHhcCCCc--eEEEEEcC
Confidence 99999988 678888888999 9999999998421 11122222 34588999999988888 79999976
Q ss_pred CCCCCChHHHHHHHHh----hccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCC-
Q 014936 262 PCGMFRKPKVVERMKK----YFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPE- 336 (415)
Q Consensus 262 ~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~- 336 (415)
+.. +...+.. .....++.+.+.+.++..+|+.. .+++++.+++++++++++.+.|++ +++.++ .|.
T Consensus 218 ~~~------~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~-~~~~~~~~~~~~~~~~~l~~~L~~-~g~~~~-~~~~ 288 (384)
T 1eg5_A 218 GVP------IRPLIHGGGQERGLRSGTQNVPGIVGAARAMEIA-VEELSEAAKHMEKLRSKLVSGLMN-LGAHII-TPLE 288 (384)
T ss_dssp TSC------CCCSBCSSCTTTTTBCSCCCHHHHHHHHHHHHHH-HHTHHHHHHHHHHHHHHHHHHHHT-TTCEEC-SCTT
T ss_pred CCc------cccccccCcccccccCCCCChHHHHHHHHHHHHH-HHhHHHHHHHHHHHHHHHHHHhCC-CCeEEe-CCcc
Confidence 310 0111111 11134567888888888888642 346788899999999999999998 477733 432
Q ss_pred C--ceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCC-------------------CCeEEEEee--CChhh
Q 014936 337 G--SMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGL-------------------KNWLRVTFA--VDPYS 393 (415)
Q Consensus 337 ~--g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~-------------------~~~iRi~~~--~~~~~ 393 (415)
+ +.++++.++. .+..++...+ .++||.+.+|..|+. .+++||+++ .++++
T Consensus 289 ~~~~~~~~~~~~~------~~~~~~~~~l-~~~gi~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~ 361 (384)
T 1eg5_A 289 ISLPNTLSVSFPN------IRGSTLQNLL-SGYGIYVSTSSACTSKDERLRHVLDAMGVDRRIAQGAIRISLCKYNTEEE 361 (384)
T ss_dssp SBCTTEEEEECTT------CCHHHHHHHH-HHTTEECBC------------CHHHHTTCCHHHHHHEEEEECCTTCCHHH
T ss_pred cCCCCEEEEEeCC------CCHHHHHHHH-hhCCeEEeccccccCCCCcchHHHHHcCCChhhcCCeEEEECCCCCCHHH
Confidence 2 3456666642 1456666665 678999999887642 368999997 68999
Q ss_pred HHHHHHHHHHHHHHHH
Q 014936 394 LEECLDRIKSFYQRHA 409 (415)
Q Consensus 394 l~~~l~~l~~~~~~~~ 409 (415)
+++++++|+++++++.
T Consensus 362 i~~~~~~l~~~~~~~~ 377 (384)
T 1eg5_A 362 VDYFLKKIEEILSFLD 377 (384)
T ss_dssp HHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999999999987654
No 91
>1e5e_A MGL, methionine gamma-lyase; methionine biosynthesis, PLP-dependent enzymes, C-S gamma lyase; HET: PPJ; 2.18A {Trichomonas vaginalis} SCOP: c.67.1.3 PDB: 1e5f_A*
Probab=100.00 E-value=1.5e-33 Score=267.19 Aligned_cols=315 Identities=15% Similarity=0.094 Sum_probs=232.4
Q ss_pred eEecccCCCCCCCCCCcHHHHHHHHHHHh----cCCCCCCCCCCCcH---HHHHHHHHHHhhhCCCCCCCCcEEEeCChH
Q 014936 38 ISLAMGDPTVHSCFHTTHVATEAVAEALL----SEKFNGYAPTAGLP---LTRRAIAEYLSRDLPYKLTPNDVFVTSGCT 110 (415)
Q Consensus 38 i~l~~g~~~~~~~~~~~~~~~~a~~~~~~----~~~~~~y~~~~g~~---~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~ 110 (415)
.+++.++|+. .+++.+.+++.+.++ ......|+. .|.+ ++++.++++++ .+++++++|++
T Consensus 21 ~~~~~~~p~~----~~~~~~~~~~~~~~~~~~~~~~~~~Y~~-~~~~~~~~l~~~ia~~~g--------~~~~i~~~~g~ 87 (404)
T 1e5e_A 21 QFGAAIPPIY----QTSTFVFDNCQQGGNRFAGQESGYIYTR-LGNPTVSNLEGKIAFLEK--------TEACVATSSGM 87 (404)
T ss_dssp TTCCSSCCCC----CCSBCCCSSHHHHHHHHTTSSCSCCBTT-TCCHHHHHHHHHHHHHHT--------CSEEEEESSHH
T ss_pred CCCCcCCCCc----CCCccccCCHHHHHHhhcCCcCCccccC-CcChHHHHHHHHHHHHhC--------CCcEEEeCChH
Confidence 4678888763 333333333333332 223346776 5666 89999999983 24788888889
Q ss_pred HHHHHHHHHhcCCCCEEEEcCCCCcchHH----HHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCcc
Q 014936 111 QAIDVAMALLSRPGANILLPRPGFPIYEL----SAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPC 186 (415)
Q Consensus 111 ~al~~~~~~l~~~gd~vi~~~p~y~~~~~----~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~npt 186 (415)
+++..++.+++++||+|+++.|+|+++.. .++..|++++.++.+ |++++++.+++++++|++++|+|||
T Consensus 88 ~ai~~~~~~l~~~gd~Vl~~~~~y~~~~~~~~~~~~~~g~~~~~v~~~-------d~~~l~~~i~~~t~~v~l~~p~Npt 160 (404)
T 1e5e_A 88 GAIAATVLTILKAGDHLISDECLYGCTHALFEHALTKFGIQVDFINTA-------IPGEVKKHMKPNTKIVYFETPANPT 160 (404)
T ss_dssp HHHHHHHHHHCCTTCEEEEESCCCHHHHHHHHTHHHHTTCEEEEECTT-------STTHHHHHCCTTEEEEEEESSCTTT
T ss_pred HHHHHHHHHHhCCCCEEEEeCCCchhHHHHHHHHHHHcCCEEEEECCC-------CHHHHHHhcCCCCcEEEEECCCCCC
Confidence 99999999999999999999999999888 678899999988762 7899999998899999999999999
Q ss_pred ccCCCHHHHHHHHHHHhh-cCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceE-EEEEeeCCCC
Q 014936 187 GNVYSYQHLQKLAETANK-LKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRL-GWFVTTDPCG 264 (415)
Q Consensus 187 G~~~~~~~l~~i~~~~~~-~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~-G~~~~~~~~~ 264 (415)
|.+++ +++|+++|++ +|+++|+||+|+.+.+. .++ .+ ++++++.|+||.|+++|+|+ ||+++++
T Consensus 161 G~v~~---l~~i~~la~~~~~~~li~De~~~~~~~~----~~~-~~---~~di~~~S~sK~~~~~g~ri~G~~~~~~--- 226 (404)
T 1e5e_A 161 LKIID---MERVCKDAHSQEGVLVIADNTFCSPMIT----NPV-DF---GVDVVVHSATKYINGHTDVVAGLICGKA--- 226 (404)
T ss_dssp CCCCC---HHHHHHHHHTSTTCEEEEECTTTCTTTC----CGG-GG---TCSEEEEETTTTTTCSSCCCCEEEEECH---
T ss_pred CcccC---HHHHHHHHHhhcCCEEEEECCCchhhhC----Ccc-cc---CCEEEEEcCccccCCCCCCeEEEEEECH---
Confidence 99985 8889999999 99999999999987653 122 22 34589999999999999998 9999875
Q ss_pred CCChHHHHH-HHHhhccc--cCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCC--------------
Q 014936 265 MFRKPKVVE-RMKKYFDI--LGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIP-------------- 327 (415)
Q Consensus 265 ~~~~~~~~~-~~~~~~~~--~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~-------------- 327 (415)
++++ .+...... ....+++.+.++...++. +..+.++..++.+.+.+.+++.+
T Consensus 227 -----~~~~~~l~~~~~~~~g~~~~~~~~~~~~~~l~~-----~~~~~~~~~~~~~~l~~~l~~~~~v~~~~~~~L~~~p 296 (404)
T 1e5e_A 227 -----DLLQQIRMVGIKDITGSVISPHDAWLITRGLST-----LNIRMKAESENAMKVAEYLKSHPAVEKVYYPGFEDHE 296 (404)
T ss_dssp -----HHHHHHHHTCCCCCCCCCCCHHHHHHHHHHHTT-----HHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTCSSST
T ss_pred -----HHHHHHHHHHHHhCCCCCCCHHHHHHHHHhHhH-----HHHHHHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCc
Confidence 5666 77665432 345788888888888875 34445555566666666665443
Q ss_pred CCcCCCCC----CCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCC-------------------------
Q 014936 328 CISCPHKP----EGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVG------------------------- 378 (415)
Q Consensus 328 ~~~~~~~p----~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~------------------------- 378 (415)
++. +..| .++++.| +++. ..+....++.+.|| +.+|..|+
T Consensus 297 ~~~-~~~~~~~~~g~~~~~-~~~~--------~~~~~~~~l~~~~i-~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~ 365 (404)
T 1e5e_A 297 GHD-IAKKQMRMYGSMITF-ILKS--------GFEGAKKLLDNLKL-ITLAVSLGGCESLIQHPASMTHAVVPKEEREAA 365 (404)
T ss_dssp THH-HHHHHCSSCCSEEEE-EETT--------HHHHHHHHHHTCSS-SEESSCCCSSSCEEECGGGTTTTTSCHHHHHHT
T ss_pred cHH-HHHhhCCCCceEEEE-EeCC--------CHHHHHHHHHhCCC-ceeccCCCCcceeeecccccccccCCHHHHHhc
Confidence 222 1111 1455555 7752 33445667788899 45554443
Q ss_pred -C-CCeEEEEeeCChhhHHHHHHHHHHHHHHHH
Q 014936 379 -L-KNWLRVTFAVDPYSLEECLDRIKSFYQRHA 409 (415)
Q Consensus 379 -~-~~~iRi~~~~~~~~l~~~l~~l~~~~~~~~ 409 (415)
. ++++|||++. |+++++++.|+++++...
T Consensus 366 g~~~~~iRis~g~--e~~~~li~~l~~al~~~~ 396 (404)
T 1e5e_A 366 GITDGMIRLSVGI--EDADELIADFKQGLDALL 396 (404)
T ss_dssp TCCTTEEEEECCS--SCHHHHHHHHHHHHHHHH
T ss_pred CCCCCeEEEEeCC--CCHHHHHHHHHHHHHHHH
Confidence 1 5799999988 889999999999887654
No 92
>2bwn_A 5-aminolevulinate synthase; tetrapyrrole biosynthesis, heme biosynthesis, pyridoxal PHOS dependent, transferase, acyltransferase; HET: LLP; 2.1A {Rhodobacter capsulatus} SCOP: c.67.1.4 PDB: 2bwo_A* 2bwp_A*
Probab=100.00 E-value=6.8e-35 Score=276.80 Aligned_cols=334 Identities=15% Similarity=0.105 Sum_probs=244.7
Q ss_pred CcceeEecccCCCCCCCCCCcHHHHHHHHHHHhc-CC-----CCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeC
Q 014936 34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLS-EK-----FNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTS 107 (415)
Q Consensus 34 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~-~~-----~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~ 107 (415)
++++++|..++.. +++++|.+.+++.+.+.. .. ...|+...+..++|+.+|++++ .+++|++++
T Consensus 45 g~~~i~~~~~~~~---~~~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~-------~~~~i~~~s 114 (401)
T 2bwn_A 45 KQDITVWCGNDYL---GMGQHPVVLAAMHEALEAVGAGSGGTRNISGTTAYHRRLEAEIAGLHQ-------KEAALVFSS 114 (401)
T ss_dssp EEEEEECSCSCTT---SGGGCHHHHHHHHHHHHHHCSCCCSBTTTBCCBHHHHHHHHHHHHHTT-------CSEEEEESC
T ss_pred CCcEEEeeCCCcc---cCCCCHHHHHHHHHHHHHcCCCCCCcCcccCChHHHHHHHHHHHHHhC-------CCcEEEECC
Confidence 4567888877531 244577899999988764 11 1245565678999999999983 257788877
Q ss_pred ChHHHHHHHHHHhc--CCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcC----CCceEEEecC
Q 014936 108 GCTQAIDVAMALLS--RPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLAD----QNTVALVIIN 181 (415)
Q Consensus 108 g~~~al~~~~~~l~--~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~----~~~~~v~i~~ 181 (415)
|++ ++..++..+. ++||.|+++.|+|+++...++..|++++.++.+ |++++++.++ ++++++++++
T Consensus 115 G~~-a~~~~~~~l~~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~-------d~~~le~~l~~~~~~~~~~v~~~~ 186 (401)
T 2bwn_A 115 AYN-ANDATLSTLRVLFPGLIIYSDSLNHASMIEGIKRNAGPKRIFRHN-------DVAHLRELIAADDPAAPKLIAFES 186 (401)
T ss_dssp HHH-HHHHHHHHHHHHSTTCEEEEETTCCHHHHHHHHHSCCCEEEECTT-------CHHHHHHHHHHSCTTSCEEEEEES
T ss_pred cHH-HHHHHHHHHhcCCCCCEEEECchhhHHHHHHHHHcCCeEEEEcCC-------CHHHHHHHHHhhccCCceEEEEec
Confidence 766 7777776653 589999999999999999999999999988752 6778877765 5789999999
Q ss_pred CCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCC-CCCeEEEccCccccCCCCceEEEEEee
Q 014936 182 PGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS-TVPILTLGSLSKRWIVPGWRLGWFVTT 260 (415)
Q Consensus 182 p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~~~~G~r~G~~~~~ 260 (415)
|+||||.+++ +++|+++|+++|+++|+||+|+.+.++..+...+...+. ...+++++|+||+|+++| ||++++
T Consensus 187 ~~nptG~~~~---l~~i~~l~~~~~~~li~Dea~~~g~~~~~g~~~~~~~~~~~~~~i~~~s~sK~~~~~G---G~~~~~ 260 (401)
T 2bwn_A 187 VYSMDGDFGP---IKEICDIAEEFGALTYIDEVHAVGMYGPRGAGVAERDGLMHRIDIFNGTLAKAYGVFG---GYIAAS 260 (401)
T ss_dssp BCTTTCCBCC---HHHHHHHHHHHTCEEEEECTTTTTTSSTTSCCHHHHHTCGGGCSEEEEESSSTTCSCC---EEEEEC
T ss_pred CcCCCCCcCC---HHHHHHHHHHcCCEEEEeccccccccCCCCceeeeccCccccCcEEEeechhhccCCC---CEEecC
Confidence 9999999987 788899999999999999999966554222211111221 123588999999998888 999885
Q ss_pred CCCCCCChHHHHHHHHhhc---cccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCC
Q 014936 261 DPCGMFRKPKVVERMKKYF---DILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEG 337 (415)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~ 337 (415)
+ ++.+.+.... ......++..+.++.++++...+..+++.+++++++++++.+.|+++ ++. +..|.+
T Consensus 261 ~--------~~~~~l~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~~~ 330 (401)
T 2bwn_A 261 A--------RMVDAVRSYAPGFIFSTSLPPAIAAGAQASIAFLKTAEGQKLRDAQQMHAKVLKMRLKAL-GMP-IIDHGS 330 (401)
T ss_dssp H--------HHHHHHHHHCHHHHTSBCCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHH-TCC-BCCCSS
T ss_pred H--------HHHHHHHHhCcCceecCCCCHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHC-CCc-ccCCCC
Confidence 4 5666665431 12233445777766666654222345788899999999999999987 777 434554
Q ss_pred ceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCC---CeEEEEee--CChhhHHHHHHHHHHHHHH
Q 014936 338 SMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLK---NWLRVTFA--VDPYSLEECLDRIKSFYQR 407 (415)
Q Consensus 338 g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~---~~iRi~~~--~~~~~l~~~l~~l~~~~~~ 407 (415)
.++|+.++.. .+..++...+++++||.+.|+..|+.+ +++|++++ .++++++.++++|++++++
T Consensus 331 -~~~~~~~~~~-----~~~~~~~~~L~~~~gi~v~~~~~~~~~~~~~~iRis~~~~~t~~~i~~~~~~l~~~~~~ 399 (401)
T 2bwn_A 331 -HIVPVVIGDP-----VHTKAVSDMLLSDYGVYVQPINFPTVPRGTERLRFTPSPVHDLKQIDGLVHAMDLLWAR 399 (401)
T ss_dssp -SCEEEECCCH-----HHHHHHHHHHHHHHCEECCEECTTTSCTTCCEEEECCCTTSCHHHHHHHHHHHHHHC--
T ss_pred -CeEEEEeCCh-----HHHHHHHHHHHhcCCEEEeecCCCCCCCCCceEEEEeeCCCCHHHHHHHHHHHHHHHHh
Confidence 4788887531 134566667665779999998877643 58999996 5899999999999988754
No 93
>1elu_A L-cysteine/L-cystine C-S lyase; FES cluster biosynthesis, pyridoxal 5'-phosphate, thiocystei aminoacrylate, enzyme-product complex; HET: PDA; 1.55A {Synechocystis SP} SCOP: c.67.1.3 PDB: 1elq_A* 1n2t_A* 1n31_A*
Probab=100.00 E-value=3.9e-35 Score=277.33 Aligned_cols=330 Identities=15% Similarity=0.103 Sum_probs=245.9
Q ss_pred cceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCC-CC-----CCCC-CCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeC
Q 014936 35 KKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEK-FN-----GYAP-TAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTS 107 (415)
Q Consensus 35 ~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~-~~-----~y~~-~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~ 107 (415)
++.++|+.+.+ .+.++.+++++.+.+.... .. .|+. ..+..++|+.+++++ ++++++|++|+
T Consensus 15 ~~~i~l~~~~~-----~~~~~~v~~a~~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~~la~~~------g~~~~~v~~~~ 83 (390)
T 1elu_A 15 ANKTYFNFGGQ-----GILPTVALEAITAMYGYLQENGPFSIAANQHIQQLIAQLRQALAETF------NVDPNTITITD 83 (390)
T ss_dssp TTSEECCTTTC-----CCCCHHHHHHHHHHHHHHHHHCSSSHHHHHHHHHHHHHHHHHHHHHT------TSCGGGEEEES
T ss_pred CCeEEecCCcc-----CCCCHHHHHHHHHHHHHHhccCCcchhhHHHHHHHHHHHHHHHHHHc------CCCHHHEEEeC
Confidence 45788888863 3456789999988876421 01 3443 357789999999998 46778999999
Q ss_pred ChHHHHHHHHHHh-cCCCCEEEEcCCCCcchHHH----HHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCC
Q 014936 108 GCTQAIDVAMALL-SRPGANILLPRPGFPIYELS----AAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINP 182 (415)
Q Consensus 108 g~~~al~~~~~~l-~~~gd~vi~~~p~y~~~~~~----~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p 182 (415)
|+++++..++.++ .++||+|+++.|+|+++... ++..|.+++.++.++++++.+|++.|++.+++++++|++++|
T Consensus 84 g~t~a~~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~ 163 (390)
T 1elu_A 84 NVTTGCDIVLWGLDWHQGDEILLTDCEHPGIIAIVQAIAARFGITYRFFPVAATLNQGDAAAVLANHLGPKTRLVILSHL 163 (390)
T ss_dssp SHHHHHHHHHHHSCCCTTCEEEEETTCCHHHHHHHHHHHHHHCCEEEEECCGGGSSSSCHHHHHHTTCCTTEEEEEEESB
T ss_pred ChHHHHHHHHhCCCCCCCCEEEEecCcccHHHHHHHHHHHHhCcEEEEEcCCCCCCccchHHHHHHhcCCCceEEEEecc
Confidence 9999999999999 79999999999999987653 566799999998764356778999999999888999999999
Q ss_pred CCccccCCCHHHHHHHHHHHh----hcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEE
Q 014936 183 GNPCGNVYSYQHLQKLAETAN----KLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFV 258 (415)
Q Consensus 183 ~nptG~~~~~~~l~~i~~~~~----~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~ 258 (415)
+||||.+++ +++|.++|+ ++|+++|+||+|+.+. ....+.. ....+++.|+||. ..+|.++||++
T Consensus 164 ~nptG~~~~---~~~i~~l~~~~~~~~~~~li~Dea~~~g~----~~~~~~~---~~~d~~~~s~~K~-~~~~~g~G~~~ 232 (390)
T 1elu_A 164 LWNTGQVLP---LAEIMAVCRRHQGNYPVRVLVDGAQSAGS----LPLDFSR---LEVDYYAFTGHKW-FAGPAGVGGLY 232 (390)
T ss_dssp CTTTCCBCC---HHHHHHHHHHCCSSSCCEEEEECTTTBTT----BCCCTTT---SCCSEEEEESSST-TCCCTTCEEEE
T ss_pred ccCCceecC---HHHHHHHHhhhhhhcCcEEEEEcccccCC----cCCChhh---cCCCEEEcccccc-ccCCCceEEEE
Confidence 999999988 788888888 9999999999998632 1112222 2234889999994 45566799999
Q ss_pred eeCCCCCCChHHHHHHHHhh-----------------------ccccCCchhHHHHHHHHhhCCCcH-HHHHHHHHHHHH
Q 014936 259 TTDPCGMFRKPKVVERMKKY-----------------------FDILGDPATFIQAAVPSILQQPDE-VFFKKTLNLLKQ 314 (415)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~~~a~~~~l~~~~~-~~~~~~~~~~~~ 314 (415)
+++ ++++.+... ....++++...+.++..+++...+ .++++..+++++
T Consensus 233 ~~~--------~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~l~~~~~~~~~~~~~~~ 304 (390)
T 1elu_A 233 IHG--------DCLGEINPTYVGWRSITYGAKGEPTGWAEGGKRFEVATSAYPQYAGLLAALQLHQRQGTAEERYQAICQ 304 (390)
T ss_dssp ECT--------TTGGGCCCCSCCTTTEEECTTSCEEEECSGGGGGCCSCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
T ss_pred ECH--------HhHhhcCCccccCCcccccccCcccccccchHhhCCCCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 975 233333321 111245566777766666543222 247888999999
Q ss_pred HHHHHHHHhhcCCCCcCCCCC--CCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEee--CC
Q 014936 315 SVDICYNKIKEIPCISCPHKP--EGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFA--VD 390 (415)
Q Consensus 315 ~~~~l~~~l~~~~~~~~~~~p--~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~--~~ 390 (415)
+++++.+.|++++++.++ .| ..+.+++++++.. .+..++...+ .++||.+.+|. .++++||+++ .+
T Consensus 305 ~~~~l~~~L~~~~g~~~~-~~~~~~~~~~~~~~~~~-----~~~~~~~~~l-~~~gi~v~~~~---~~~~iRis~~~~~~ 374 (390)
T 1elu_A 305 RSEFLWRGLNQLPHVHCL-ATSAPQAGLVSFTVDSP-----LGHRAIVQKL-EEQRIYLRTIA---DPDCIRACCHYITD 374 (390)
T ss_dssp HHHHHHHHHHHSTTEEES-CSSCCSSSEEEEEECSS-----SCHHHHHHHH-HHTTEECEEET---TTTEEEEECCTTCC
T ss_pred HHHHHHHHHHhcCCcEEe-cCccccccEEEEEcCCC-----CCHHHHHHHH-HHCCEEEEecC---CCCeEEEecccCCC
Confidence 999999999988788733 32 3455555577521 2466677776 56799999986 3589999994 78
Q ss_pred hhhHHHHHHHHHHH
Q 014936 391 PYSLEECLDRIKSF 404 (415)
Q Consensus 391 ~~~l~~~l~~l~~~ 404 (415)
++++++++++|+++
T Consensus 375 ~~~i~~~~~~l~~~ 388 (390)
T 1elu_A 375 EEEINHLLARLADF 388 (390)
T ss_dssp HHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHhh
Confidence 99999999998753
No 94
>1fc4_A 2-amino-3-ketobutyrate conenzyme A ligase; 2-amino-3-ketobutyrate COA ligase, pyridoxal phosphate, COEN transferase, structural genomics; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.4
Probab=100.00 E-value=1.2e-34 Score=275.22 Aligned_cols=332 Identities=13% Similarity=0.091 Sum_probs=250.6
Q ss_pred cCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhc-CCC---CCCC--CCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEe
Q 014936 33 NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLS-EKF---NGYA--PTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVT 106 (415)
Q Consensus 33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~-~~~---~~y~--~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~ 106 (415)
+++.++||+.|+|- ++.+++.+.+++.+.+.. ... ..|+ ...+..++|+.+++++ +++ +.+ ++
T Consensus 43 ~g~~~id~~~~~~~---g~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~------g~~-~~i-~~ 111 (401)
T 1fc4_A 43 DGSHVINFCANNYL---GLANHPDLIAAAKAGMDSHGFGMASVRFICGTQDSHKELEQKLAAFL------GME-DAI-LY 111 (401)
T ss_dssp TSCEEEECCCSCTT---SCTTCHHHHHHHHHHHHHHCSCCCSCHHHHCCBHHHHHHHHHHHHHH------TCS-EEE-EE
T ss_pred CCccEEEeeccCcc---cccCCHHHHHHHHHHHHHhCCCCCCCCcccCCcHHHHHHHHHHHHHh------CCC-cEE-Ee
Confidence 46789999999641 123589999999988764 211 1221 2456789999999998 334 455 45
Q ss_pred CChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCC------CceEEEec
Q 014936 107 SGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ------NTVALVII 180 (415)
Q Consensus 107 ~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~------~~~~v~i~ 180 (415)
++|++++..+++++.++||.|+++.|+|..+...++..|.+++.++. .|++++++.+++ ++++++++
T Consensus 112 ~sGs~a~~~~~~~~~~~gd~v~~~~~~~~~~~~~~~~~g~~~~~~~~-------~d~~~l~~~l~~~~~~~~~~~~v~~~ 184 (401)
T 1fc4_A 112 SSCFDANGGLFETLLGAEDAIISDALNHASIIDGVRLCKAKRYRYAN-------NDMQELEARLKEAREAGARHVLIATD 184 (401)
T ss_dssp SCHHHHHHTTHHHHCCTTCEEEEETTCCHHHHHHHHTSCSEEEEECT-------TCHHHHHHHHHHHHHTTCSSEEEEEE
T ss_pred CChHHHHHHHHHHHcCCCCEEEEcchhHHHHHHHHHHcCCceEEECC-------CCHHHHHHHHHHhhccCCCceEEEEe
Confidence 55678999999999999999999999999888889999999988763 478888888764 68899999
Q ss_pred CCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccC-Cccc-CCCCcccccccCCCCCeEEEccCcccc-CCCCceEEEE
Q 014936 181 NPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYG-HLVF-GDKPFVPMGVFGSTVPILTLGSLSKRW-IVPGWRLGWF 257 (415)
Q Consensus 181 ~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~-~~~~-~~~~~~~~~~~~~~~~~i~~~s~sK~~-~~~G~r~G~~ 257 (415)
+|+||||.+++ +++|.++|+++|+++|+||+|+ ++.+ .+....+...+.. +..++++|+||.| +++| ||+
T Consensus 185 ~~~nptG~~~~---~~~i~~l~~~~~~~li~De~~~~g~~~~~g~~~~~~~~~~~-~~di~~~s~sK~~~~~~g---G~~ 257 (401)
T 1fc4_A 185 GVFSMDGVIAN---LKGVCDLADKYDALVMVDDSHAVGFVGENGRGSHEYCDVMG-RVDIITGTLGKALGGASG---GYT 257 (401)
T ss_dssp SEETTTTEECC---HHHHHHHHHHTTEEEEEECTTTTTTSSTTSCCHHHHTTCTT-CCSEEEEESSSTTCSSSC---EEE
T ss_pred CCcCCCCCCCC---HHHHHHHHHHcCCEEEEECcccccccCCCCCccHHHcCCCc-CCcEEEecchhhccCCCC---EEE
Confidence 99999999988 8888999999999999999996 6543 3333222122222 3458899999998 5555 999
Q ss_pred EeeCCCCCCChHHHHHHHHhhc---cccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCC
Q 014936 258 VTTDPCGMFRKPKVVERMKKYF---DILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHK 334 (415)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~ 334 (415)
++++ ++++.+.... ..+.+.+++.+.++.++|+.. ...++.+++++++++++.+.|+++ ++. + .
T Consensus 258 ~~~~--------~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l~~~--~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~-~ 324 (401)
T 1fc4_A 258 AARK--------EVVEWLRQRSRPYLFSNSLAPAIVAASIKVLEMV--EAGSELRDRLWANARQFREQMSAA-GFT-L-A 324 (401)
T ss_dssp EECH--------HHHHHHHHHCHHHHHSCCCCHHHHHHHHHHHHHH--HTCHHHHHHHHHHHHHHHHHHHHT-TCC-B-C
T ss_pred EcCH--------HHHHHHHHhCcCceeCCCCCHHHHHHHHHHHHHH--hcCHHHHHHHHHHHHHHHHHHHHc-CCc-c-c
Confidence 9854 6777776543 124577888888888887642 113678889999999999999988 777 4 3
Q ss_pred CCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCC---CCeEEEEee--CChhhHHHHHHHHHHHHHHH
Q 014936 335 PEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGL---KNWLRVTFA--VDPYSLEECLDRIKSFYQRH 408 (415)
Q Consensus 335 p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~---~~~iRi~~~--~~~~~l~~~l~~l~~~~~~~ 408 (415)
|..++++|++++.. .+..++...++ ++||.+.++..|+. .+++||+++ .+++++++++++|+++++++
T Consensus 325 ~~~~~~~~~~~~~~-----~~~~~l~~~l~-~~gi~v~~~~~~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~ 397 (401)
T 1fc4_A 325 GADHAIIPVMLGDA-----VVAQKFARELQ-KEGIYVTGFFYPVVPKGQARIRTQMSAAHTPEQITRAVEAFTRIGKQL 397 (401)
T ss_dssp CSSSSEEEEEEECH-----HHHHHHHHHHH-HTTEECCEECTTSSCTTCEEEEEECCTTCCHHHHHHHHHHHHHHHHHT
T ss_pred CCCCCEEEEEcCCh-----HHHHHHHHHHH-HCCcEEeeecCCCCCCCCceEEEEeCCCCCHHHHHHHHHHHHHHHHHh
Confidence 67788999888531 13456666664 56999999987764 358999996 68999999999999988753
No 95
>2huf_A Alanine glyoxylate aminotransferase; alpha and beta protein, PLP-dependent transferase; HET: LLP; 1.75A {Aedes aegypti} PDB: 2hui_A* 2huu_A*
Probab=100.00 E-value=1.7e-34 Score=273.38 Aligned_cols=332 Identities=12% Similarity=0.065 Sum_probs=248.0
Q ss_pred CcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCC--CCCCcHHHHHHHHHHHhhhCCCCCCCC-cEEEeCChH
Q 014936 34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYA--PTAGLPLTRRAIAEYLSRDLPYKLTPN-DVFVTSGCT 110 (415)
Q Consensus 34 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~--~~~g~~~lr~~ia~~~~~~~~~~~~~~-~i~i~~g~~ 110 (415)
+...+++..|. +++++.+++++.+.+.. .|. ...+..++++.+++++ +++++ ++++|+|++
T Consensus 17 ~~~~~~~~~g~------~~~~~~v~~a~~~~~~~----~~~~~~~~~~~~l~~~la~~~------g~~~~~~i~~~~g~t 80 (393)
T 2huf_A 17 TPNKLLMGPGP------SNAPQRVLDAMSRPILG----HLHPETLKIMDDIKEGVRYLF------QTNNIATFCLSASGH 80 (393)
T ss_dssp CCCCEECSSSC------CCCCHHHHHHTTSCCCC----TTSHHHHHHHHHHHHHHHHHH------TCCCSEEEEESSCHH
T ss_pred CCCeEEecCCC------CCCCHHHHHHHHhhhcc----CCCHHHHHHHHHHHHHHHHHh------CCCCCcEEEEcCcHH
Confidence 44556776663 56788898888776543 232 1245688999999988 45565 899999999
Q ss_pred HHHHHHHHHhcCCCCEEEEcCCCCcch--HHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCC-CceEEEecCCCCccc
Q 014936 111 QAIDVAMALLSRPGANILLPRPGFPIY--ELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ-NTVALVIINPGNPCG 187 (415)
Q Consensus 111 ~al~~~~~~l~~~gd~vi~~~p~y~~~--~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~v~i~~p~nptG 187 (415)
+++..++.++.++||+|+++.|+|+++ ...++..|.+++.++.++ ++.+|++++++.+++ ++++|++++|+||||
T Consensus 81 ~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG 158 (393)
T 2huf_A 81 GGMEATLCNLLEDGDVILIGHTGHWGDRSADMATRYGADVRVVKSKV--GQSLSLDEIRDALLIHKPSVLFLTQGDSSTG 158 (393)
T ss_dssp HHHHHHHHHHCCTTCEEEEEESSHHHHHHHHHHHHTTCEEEEEECCT--TCCCCHHHHHHHHHHHCCSEEEEESEETTTT
T ss_pred HHHHHHHHHHhCCCCEEEEECCCcchHHHHHHHHHcCCeeEEEeCCC--CCCCCHHHHHHHHhccCCcEEEEEccCCCcc
Confidence 999999999999999999999999874 334566899999998754 346899999999887 789999999999999
Q ss_pred cCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccc-cCCCCceEEEEEeeCCCCCC
Q 014936 188 NVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKR-WIVPGWRLGWFVTTDPCGMF 266 (415)
Q Consensus 188 ~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~-~~~~G~r~G~~~~~~~~~~~ 266 (415)
.+++ +++|+++|+++|+++|+|++++... ....+..+ +..+++.|+||+ ++++|+ ||+++++
T Consensus 159 ~~~~---l~~i~~~~~~~~~~li~D~a~~~~~----~~~~~~~~---~~d~~~~s~sK~l~g~~G~--G~~~~~~----- 221 (393)
T 2huf_A 159 VLQG---LEGVGALCHQHNCLLIVDTVASLGG----APMFMDRW---EIDAMYTGSQKVLGAPPGI--TPVSFSH----- 221 (393)
T ss_dssp EECC---CTTHHHHHHHTTCEEEEECTTTBTT----BCCCTTTT---TCSEEECCSSSTTCCCSSC--EEEEECH-----
T ss_pred ccCC---HHHHHHHHHHcCCEEEEEcccccCC----CCcchhhc---CccEEEECCCcccccCCCe--EEEEECH-----
Confidence 9987 6788888999999999999987522 11122222 345888999997 456776 9999864
Q ss_pred ChHHHHHHHHhhc----c--------------------ccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHH
Q 014936 267 RKPKVVERMKKYF----D--------------------ILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNK 322 (415)
Q Consensus 267 ~~~~~~~~~~~~~----~--------------------~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~ 322 (415)
++++.++... . ..++++...+.++.++++...+..+++..++++++++++.+.
T Consensus 222 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~ 298 (393)
T 2huf_A 222 ---RAVERYKRRNTKVKVYYWDMSLVGDYWGCFGRPRIYHHTISSTLLYGLREAIAMACEEGLPALIARHEDCAKRLYRG 298 (393)
T ss_dssp ---HHHHHHHTCSSCCSCGGGCHHHHHHHTTCSSSCCCCSCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHH
T ss_pred ---HHHHHHhhcCCCCceEEEchHHHHhhhccccccCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHH
Confidence 5777765430 0 012456666666666665322234778889999999999999
Q ss_pred hhcCCCCcCCCCCC---CceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEe-e--CChhhHHH
Q 014936 323 IKEIPCISCPHKPE---GSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTF-A--VDPYSLEE 396 (415)
Q Consensus 323 l~~~~~~~~~~~p~---~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~-~--~~~~~l~~ 396 (415)
|+++ ++.++ .|. .+.+++++++.. .+..++...+++++||.+.+|..|...+++||++ + ++++++++
T Consensus 299 L~~~-g~~~~-~~~~~~~~~~~~~~~~~~-----~~~~~~~~~L~~~~gi~v~~g~~~~~~~~~Ri~~~~~~~~~e~i~~ 371 (393)
T 2huf_A 299 LQDA-GFELY-ADPKDRLSTVTTIKVPQG-----VDWLKAAQYAMKTYLVEISGGLGPTAGQVFRIGLMGQNATTERVDR 371 (393)
T ss_dssp HHHT-TCCBS-SCGGGBCTTEEEEECCTT-----CCHHHHHHHHHHHHCEECBCCCGGGTTTEEEEECCGGGCSHHHHHH
T ss_pred HHHc-CCeec-cCccccCCcEEEEEcCCC-----CCHHHHHHHHHHhCCEEEecCcccccCCEEEEEcccCcCCHHHHHH
Confidence 9988 77733 443 345777777521 2466777777666799999998776678999999 6 46889999
Q ss_pred HHHHHHHHHHHHHH
Q 014936 397 CLDRIKSFYQRHAK 410 (415)
Q Consensus 397 ~l~~l~~~~~~~~~ 410 (415)
++++|+++++++..
T Consensus 372 ~~~~l~~~~~~~~~ 385 (393)
T 2huf_A 372 VLQVFQEAVAAVKP 385 (393)
T ss_dssp HHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHcCC
Confidence 99999999876543
No 96
>3kki_A CAI-1 autoinducer synthase; quorum sensing, CQSA, P virulence, acyltransferase, aminotransferase, pyridoxal PHO transferase; HET: PLP; 1.80A {Vibrio cholerae} PDB: 3hqt_A* 2wk9_A* 2wk8_A* 2wka_A* 2wk7_A
Probab=100.00 E-value=9.1e-34 Score=269.72 Aligned_cols=331 Identities=12% Similarity=0.087 Sum_probs=244.7
Q ss_pred cCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCC--C----CCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEe
Q 014936 33 NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEK--F----NGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVT 106 (415)
Q Consensus 33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~--~----~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~ 106 (415)
.++.++||+.+++ .+++.+|.+.+++.+.+.... . ..|+......++++.++++++ .+..+++
T Consensus 57 ~g~~~ld~~s~~~---l~~~~~p~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g--------~~~~i~~ 125 (409)
T 3kki_A 57 ASPDDIILQSNDY---LALANHPLIKARLAKSLLEEQQSLFMSASFLQNDYDKPMIEKRLAKFTG--------FDECLLS 125 (409)
T ss_dssp CCTTSEECCCSCT---TCCTTCHHHHHHHHHHHHSCCCCCCSBGGGGCSTTTSCHHHHHHHHHHT--------CSEEEEE
T ss_pred CCCceEEeeccCc---cCCcCCHHHHHHHHHHHHHcCCCCCccccccCCcHHHHHHHHHHHHHhC--------CCeEEEe
Confidence 3567899988763 356678999999999887521 1 122333456789999999983 2345666
Q ss_pred CChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCC-CceEEEecCCCCc
Q 014936 107 SGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ-NTVALVIINPGNP 185 (415)
Q Consensus 107 ~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~v~i~~p~np 185 (415)
++|++++..++.++.++||.|+++.|+|..+...+...|.++..++. .|+++|++.+++ +++++++++|+||
T Consensus 126 ~sGt~a~~~~l~~~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~-------~d~~~le~~l~~~~~~~vi~~~~~np 198 (409)
T 3kki_A 126 QSGWNANVGLLQTICQPNTNVYIDFFAHMSLWEGARYANAQAHPFMH-------NNCDHLRMLIQRHGPGIIVVDSIYST 198 (409)
T ss_dssp SCHHHHHHHHHHHHCCTTCEEEEETTSCHHHHHHHHHTTCEEEEECT-------TCHHHHHHHHHHHCSCEEEEESBCTT
T ss_pred cchHHHHHHHHHHhcCCCCEEEECCCcCHHHHHHHHHcCCeEEEecC-------CCHHHHHHHHHhcCCeEEEECCCCCC
Confidence 77789999999999999999999999999999999999999888764 589999998875 4789999999999
Q ss_pred cccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCC-CCCeEEEccCccccCCCCceEEEEEeeCCCC
Q 014936 186 CGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS-TVPILTLGSLSKRWIVPGWRLGWFVTTDPCG 264 (415)
Q Consensus 186 tG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~ 264 (415)
||.+++ +++|+++|+++|+++|+||+|+.+.++..+.......+. .+..+++.|+||+|+++| ||+++++
T Consensus 199 tG~~~~---l~~l~~la~~~~~~li~De~~~~g~~g~~g~~~~~~~~~~~~~di~~~s~sK~~~~~g---g~v~~~~--- 269 (409)
T 3kki_A 199 LGTIAP---LAELVNISKEFGCALLVDESHSLGTHGPNGAGLLAELGLTREVHFMTASLAKTFAYRA---GAIWCNN--- 269 (409)
T ss_dssp TCCBCC---HHHHHHHHHHHTCEEEEECTTTTTTSSGGGCCHHHHHTCGGGCSEEEEESSSTTCSSC---EEEEESS---
T ss_pred CCCcCC---HHHHHHHHHHcCCEEEEECCccccccCCCCCcchhhcCCCCCCCEEEeecchhhCCCc---eEEEECH---
Confidence 999987 888999999999999999999986554222221111221 123488899999988775 9999865
Q ss_pred CCChHHHHHHHHhh---ccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEE
Q 014936 265 MFRKPKVVERMKKY---FDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAV 341 (415)
Q Consensus 265 ~~~~~~~~~~~~~~---~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~ 341 (415)
++++.+... ...+...++..+.++.+.++.. +..++.+++++++++++.+.|+++ ++. + +..++++
T Consensus 270 -----~~~~~~~~~~~~~~~~~~~~~~~~aa~~aal~~~--~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~--~~~~~~~ 338 (409)
T 3kki_A 270 -----EVNRCVPFISYPAIFSSTLLPYEAAGLETTLEII--ESADNRRQHLDRMARKLRIGLSQL-GLT-I--RSESQII 338 (409)
T ss_dssp -----SGGGTHHHHCHHHHHSBCCCHHHHHHHHHHHHHH--HHCHHHHHHHHHHHHHHHHHHHTT-TCC-C--CCSSSEE
T ss_pred -----HHHHHHHHhCcCccccCCCcHHHHHHHHHHHHHH--hcCHHHHHHHHHHHHHHHHHHHHc-CCc-c--CCCCCEE
Confidence 233433332 1123345666666776666532 223677889999999999999988 676 3 2477888
Q ss_pred EEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCC---CCeEEEEee--CChhhHHHHHHHHHHHHHH
Q 014936 342 MLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGL---KNWLRVTFA--VDPYSLEECLDRIKSFYQR 407 (415)
Q Consensus 342 ~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~---~~~iRi~~~--~~~~~l~~~l~~l~~~~~~ 407 (415)
|+.++.. .+..++...+++ +||.+.|+..+.. .+++||+++ .+++++++++++|+++++.
T Consensus 339 ~~~~~~~-----~~~~~~~~~L~~-~Gv~v~~~~~~~~~~~~~~iRi~~~~~~t~e~i~~~~~~l~~~l~~ 403 (409)
T 3kki_A 339 GLETGDE-----RNTEKVRDYLES-NGVFGSVFCRPATSKNKNIIRLSLNSDVNDEQIAKIIEVCSDAVNY 403 (409)
T ss_dssp EEEEESH-----HHHHHHHHHHHH-TTEECEEECTTSSCTTCEEEEEECCTTCCHHHHHHHHHHHHHHHHH
T ss_pred EEEeCCH-----HHHHHHHHHHHH-CCceEeeeCCCCcCCCCcEEEEEccCCCCHHHHHHHHHHHHHHHhc
Confidence 8887532 124456666654 5999988654422 479999995 6899999999999998864
No 97
>2z9v_A Aspartate aminotransferase; pyridoxamine, pyruvate; HET: PXM; 1.70A {Mesorhizobium loti} PDB: 2z9u_A* 2z9w_A* 2z9x_A*
Probab=100.00 E-value=4.7e-34 Score=270.19 Aligned_cols=330 Identities=10% Similarity=0.044 Sum_probs=242.5
Q ss_pred eEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHH
Q 014936 38 ISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAM 117 (415)
Q Consensus 38 i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~ 117 (415)
+.|..+.+ .++++.+++++.+.+.. ...+....+..++|+.+++++ +++++++++|+|+++++.+++
T Consensus 10 ~yl~~~~~-----~~~~~~v~~a~~~~~~~--~~~~~~~~~~~~l~~~la~~~------g~~~~~v~~t~g~t~a~~~~~ 76 (392)
T 2z9v_A 10 VITLTAGP-----VNAYPEVLRGLGRTVLY--DYDPAFQLLYEKVVDKAQKAM------RLSNKPVILHGEPVLGLEAAA 76 (392)
T ss_dssp SEECSSSC-----CCCCHHHHHHTTSCCCC--TTSHHHHHHHHHHHHHHHHHT------TCSSCCEEESSCTHHHHHHHH
T ss_pred ceeecCCC-----cCCCHHHHHHHhccccc--cccHHHHHHHHHHHHHHHHHh------CCCCCEEEEeCCchHHHHHHH
Confidence 45555543 45678888888776543 111222235678899999887 456789999999999999999
Q ss_pred HHhcCCCCEEEEcCCCCcch--HHHHHhCCCeEEEeeccCCCCCCCChhHHHhhc--CCCceEEEecCCCCccccCCCHH
Q 014936 118 ALLSRPGANILLPRPGFPIY--ELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLA--DQNTVALVIINPGNPCGNVYSYQ 193 (415)
Q Consensus 118 ~~l~~~gd~vi~~~p~y~~~--~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~v~i~~p~nptG~~~~~~ 193 (415)
.++.++||+|+++.|+|+++ ...++..|.+++.++.+. ++.+|+++|++++ .++++++++++|+||||.+++
T Consensus 77 ~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~l~~~~~~~~v~~~~~~nptG~~~~-- 152 (392)
T 2z9v_A 77 ASLISPDDVVLNLASGVYGKGFGYWAKRYSPHLLEIEVPY--NEAIDPQAVADMLKAHPEITVVSVCHHDTPSGTINP-- 152 (392)
T ss_dssp HHHCCTTCCEEEEESSHHHHHHHHHHHHHCSCEEEEECCT--TSCCCHHHHHHHHHHCTTCCEEEEESEEGGGTEECC--
T ss_pred HHhcCCCCEEEEecCCcccHHHHHHHHHcCCceEEeeCCC--CCCCCHHHHHHHHhcCCCCcEEEEeccCCCCceecc--
Confidence 99999999999999999875 344566799999998754 3458999999988 457899999999999999987
Q ss_pred HHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCcccc-CCCCceEEEEEeeCCCCCCChHHHH
Q 014936 194 HLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRW-IVPGWRLGWFVTTDPCGMFRKPKVV 272 (415)
Q Consensus 194 ~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~-~~~G~r~G~~~~~~~~~~~~~~~~~ 272 (415)
+++|.++|+++|+++|+|++|+... ....+..++ ..++++|+||++ +.+| +||+++++ +++
T Consensus 153 -l~~i~~l~~~~~~~li~D~a~~~g~----~~~~~~~~~---~d~~~~s~sK~~~~~~g--~G~l~~~~--------~~~ 214 (392)
T 2z9v_A 153 -IDAIGALVSAHGAYLIVDAVSSFGG----MKTHPEDCK---ADIYVTGPNKCLGAPPG--LTMMGVSE--------RAW 214 (392)
T ss_dssp -HHHHHHHHHHTTCEEEEECTTTBTT----BSCCGGGGT---CSEEEECSSSTTCCCSC--CEEEEECH--------HHH
T ss_pred -HHHHHHHHHHcCCeEEEEcccccCC----ccccccccc---ceEEEecCcccccCCCc--eeEEEECH--------HHH
Confidence 6788889999999999999998522 112222222 348889999963 3456 59999865 566
Q ss_pred HHHHhh---------------------ccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcC
Q 014936 273 ERMKKY---------------------FDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISC 331 (415)
Q Consensus 273 ~~~~~~---------------------~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~ 331 (415)
+.++.. ....++.+...+.++..+++...+..+++..++++++++++.+.|+++ ++.+
T Consensus 215 ~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~ 293 (392)
T 2z9v_A 215 AKMKANPLAPRASMLSIVDWENAWSRDKPFPFTPSVSEINGLDVALDLYLNEGPEAVWARHALTAKAMRAGVTAM-GLSV 293 (392)
T ss_dssp HHHHTCTTSCCSSTTCSGGGTTTTSTTSCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCB
T ss_pred HHhhhccCCCCceeccHHHHHhhhcccCCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHc-CCee
Confidence 666431 111244566666666666653211226788899999999999999987 7773
Q ss_pred CCCCC----CceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEe-e--CChhhHHHHHHHHHHH
Q 014936 332 PHKPE----GSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTF-A--VDPYSLEECLDRIKSF 404 (415)
Q Consensus 332 ~~~p~----~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~-~--~~~~~l~~~l~~l~~~ 404 (415)
+ .|. .+.++++.++.. .+..++...+++++||.+.+|..+..++++|+++ + .+++++++++++|+++
T Consensus 294 ~-~~~~~~~~~~~~~~~~~~~-----~~~~~l~~~L~~~~gi~v~~g~~~~~~~~lRi~~~~~~~~~~~i~~~~~~l~~~ 367 (392)
T 2z9v_A 294 W-AASDSIASPTTTAVRTPDG-----VDEKALRQAARARYGVVFSSGRGETLGKLTRIGHMGPTAQPIYAIAALTALGGA 367 (392)
T ss_dssp S-SSSGGGBCTTEEEEECCTT-----CCHHHHHHHHHHHHCEECEECCGGGTTTEEEEECCGGGCSHHHHHHHHHHHHHH
T ss_pred c-cCCccccCCceEEEECCCC-----CCHHHHHHHHHhcCCEEEecCCCCCCCCeEEEeCcccccCHHHHHHHHHHHHHH
Confidence 3 423 467788887531 2466777777555599999998766678999995 4 6899999999999999
Q ss_pred HHHHH
Q 014936 405 YQRHA 409 (415)
Q Consensus 405 ~~~~~ 409 (415)
++++.
T Consensus 368 ~~~~~ 372 (392)
T 2z9v_A 368 MNAAG 372 (392)
T ss_dssp HHHTT
T ss_pred HHHcC
Confidence 87643
No 98
>2e7j_A SEP-tRNA:Cys-tRNA synthase; seven-stranded BETE-strand, lyase, structural genomics; HET: PLP; 2.40A {Archaeoglobus fulgidus} SCOP: c.67.1.9 PDB: 2e7i_A*
Probab=100.00 E-value=1.3e-35 Score=278.67 Aligned_cols=324 Identities=11% Similarity=0.081 Sum_probs=240.0
Q ss_pred CcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCC--------CCCCCCCCCcHHHHHH-HHHHHhhhCCCCCCCCcEE
Q 014936 34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEK--------FNGYAPTAGLPLTRRA-IAEYLSRDLPYKLTPNDVF 104 (415)
Q Consensus 34 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~--------~~~y~~~~g~~~lr~~-ia~~~~~~~~~~~~~~~i~ 104 (415)
++++++|+.|.+. .++++.+.+++.+.+.... ...|.+..+..++++. ++++++ .+ +++
T Consensus 6 ~~~~i~ld~~~~~----~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~la~~~~------~~--~v~ 73 (371)
T 2e7j_A 6 TKDFINIDPLQTG----GKLTEEARQALLEWGDGYSVCDFCTTGRLDEIKTPPIHDFIHNQLPKFLG------CD--VAR 73 (371)
T ss_dssp --CCEECCHHHHT----CCCCHHHHHHHHHC--------------------CCHHHHHHTHHHHHTT------SS--EEE
T ss_pred CCCcEEecccccC----CCCCHHHHHHHHHHHhhcccCCccccccchhhHHHHHHHHHHHHHHHHcC------CC--EEE
Confidence 4567888886532 4568999999988776421 1234456789999999 999983 33 999
Q ss_pred EeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEee--ccCCCCCCCChhHHHhhcC-----CCceEE
Q 014936 105 VTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFD--LLPDKGWEVDLDDIESLAD-----QNTVAL 177 (415)
Q Consensus 105 i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~--~~~~~~~~~~~~~l~~~~~-----~~~~~v 177 (415)
+++|+++++..++.++.++||+|+++.|+|+++...++..|++++.++ .+ .++.+|+++|++.++ ++++++
T Consensus 74 ~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~--~~~~~d~~~l~~~l~~~~~~~~~~~v 151 (371)
T 2e7j_A 74 VTNGAREAKFAVMHSLAKKDAWVVMDENCHYSSYVAAERAGLNIALVPKTDY--PDYAITPENFAQTIEETKKRGEVVLA 151 (371)
T ss_dssp EESSHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHHHTTCEEEEECCCCT--TTCCCCHHHHHHHHHHHTTTSCEEEE
T ss_pred EeCChHHHHHHHHHHHhCCCCEEEEccCcchHHHHHHHHcCCeEEEeecccC--CCCCcCHHHHHHHHHhhcccCCeEEE
Confidence 999999999999999999999999999999999999999999999998 54 346789999999887 688999
Q ss_pred EecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEE
Q 014936 178 VIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWF 257 (415)
Q Consensus 178 ~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~ 257 (415)
++++|+||||.+++ +++|+++|+++|+++|+|++|+.+... ..+..++. .++++|+||+++.+ .|+||+
T Consensus 152 ~~~~~~nptG~~~~---~~~i~~~~~~~~~~li~D~a~~~~~~~----~~~~~~~~---di~~~s~sK~~~~~-~~~G~~ 220 (371)
T 2e7j_A 152 LITYPDGNYGNLPD---VKKIAKVCSEYDVPLLVNGAYAIGRMP----VSLKEIGA---DFIVGSGHKSMAAS-GPIGVM 220 (371)
T ss_dssp EEESSCTTTCCCCC---HHHHHHHHHTTTCCEEEECTTTBTTBC----CCHHHHTC---SEEEEEHHHHSSCC-SSCEEE
T ss_pred EEECCCCCCcccCC---HHHHHHHHHHcCCeEEEECccccCCCC----CChhhcCC---CEEEecCCcCCCCC-CCcEEE
Confidence 99999999999987 588888899999999999999985432 22333333 38899999987655 499999
Q ss_pred EeeCCCCCCChHHHHHH-HHhhcc---c-----cCCchhHHHHHHHHhhCCCcHHHHH-HHHHHH--HHHHHHHHHHhhc
Q 014936 258 VTTDPCGMFRKPKVVER-MKKYFD---I-----LGDPATFIQAAVPSILQQPDEVFFK-KTLNLL--KQSVDICYNKIKE 325 (415)
Q Consensus 258 ~~~~~~~~~~~~~~~~~-~~~~~~---~-----~~~~~~~~~~a~~~~l~~~~~~~~~-~~~~~~--~~~~~~l~~~l~~ 325 (415)
++++ ++++. ++.... . .++.++..+.++..+++. ++ +..+++ +++++++.+.|++
T Consensus 221 ~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~-----~~~~~~~~~~~~~~~~~l~~~L~~ 287 (371)
T 2e7j_A 221 GMKE--------EWAEIVLRRSEKYKNKEVELLGCTARGATIITLMASFPH-----VRERIKRWDEEVEKARRFAAEMEK 287 (371)
T ss_dssp EECT--------TTTTTTTCBCSSCTTSBGGGTTCCCCSHHHHHHHHHHHH-----HHHHGGGHHHHHHHHHHHHHHHHH
T ss_pred EEec--------hhhhhhccccccCcccccccccCCcCHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9976 23333 333221 1 344566666666666643 22 566777 8889999999988
Q ss_pred CCCCcCCCCCC--CceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCC------CCeEE-EEee---CChhh
Q 014936 326 IPCISCPHKPE--GSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGL------KNWLR-VTFA---VDPYS 393 (415)
Q Consensus 326 ~~~~~~~~~p~--~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~------~~~iR-i~~~---~~~~~ 393 (415)
+ ++..+ .|. .+.++|++++ +..++...+ .++||.+.| ..+.. ++++| ++++ .++++
T Consensus 288 ~-~~~~~-~~~~~~~~~~~~~~~--------~~~~~~~~l-~~~gi~~~~-~~~~~~~~g~~~~~iRii~~~~~~~~~~~ 355 (371)
T 2e7j_A 288 L-GIKQL-GDNPHNHDLMFFHAE--------VLYEISKKA-KGGRFFLYR-ELKSRKIHGIKPGLTRYFKLSTYGLSDEE 355 (371)
T ss_dssp T-TCEEE-SSSSCCSSEEEEECH--------HHHHHHHHS-SSGGGHHHH-HHHHTTEECSCTTCCSEEEEECTTCCHHH
T ss_pred c-CcEEe-cCCCccCceEEEECC--------CHHHHHHHH-HHCCEEEEe-ccccccccCCCCCceEEEEeeccCCCHHH
Confidence 7 77733 443 4668888774 245565555 578999988 43322 68999 9997 68999
Q ss_pred HHHHHHHHHHHHHH
Q 014936 394 LEECLDRIKSFYQR 407 (415)
Q Consensus 394 l~~~l~~l~~~~~~ 407 (415)
++.++++|++++++
T Consensus 356 i~~~~~~l~~~~~~ 369 (371)
T 2e7j_A 356 VDYVLNAFKEIIEK 369 (371)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh
Confidence 99999999988764
No 99
>3f9t_A TDC, L-tyrosine decarboxylase MFNA; NP_247014.1, L-tyrosine decarboxylase MFNA (EC 4.1.1.25), ST genomics; HET: PLP; 2.11A {Methanocaldococcus jannaschii}
Probab=100.00 E-value=1.5e-33 Score=266.85 Aligned_cols=322 Identities=14% Similarity=0.048 Sum_probs=238.1
Q ss_pred CCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCC-------
Q 014936 51 FHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRP------- 123 (415)
Q Consensus 51 ~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~------- 123 (415)
.++++.+.+++.+.+..... .+....+..++++.+++++.+.+| ++++++++|+|+++++..++.++..+
T Consensus 40 ~~~~~~v~~a~~~~~~~~~~-~~~~~~~~~~~~~~l~~~la~~~~--~~~~~i~~~~ggt~a~~~~~~~~~~~~~~~~~~ 116 (397)
T 3f9t_A 40 SNVLPITRKIVDIFLETNLG-DPGLFKGTKLLEEKAVALLGSLLN--NKDAYGHIVSGGTEANLMALRCIKNIWREKRRK 116 (397)
T ss_dssp CCCCTHHHHHHHHHTTCCTT-SGGGBHHHHHHHHHHHHHHHHHTT--CTTCEEEEESCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCcHHHHHHHHHHHhhcCC-CcccChhHHHHHHHHHHHHHHHhC--CCCCCEEEecCcHHHHHHHHHHHHHHHHhhhhh
Confidence 45578899999988764221 222212445666666666665554 56789999999999999999998765
Q ss_pred ------CCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCC-CceEEEecCCCCccccCCCHHHHH
Q 014936 124 ------GANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ-NTVALVIINPGNPCGNVYSYQHLQ 196 (415)
Q Consensus 124 ------gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~v~i~~p~nptG~~~~~~~l~ 196 (415)
||+|+++.|+|+++...++..|++++.++.++ ++.+|+++|++++++ +++++++++|+||||.+.+ ++
T Consensus 117 ~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~---l~ 191 (397)
T 3f9t_A 117 GLSKNEHPKIIVPITAHFSFEKGREMMDLEYIYAPIKE--DYTIDEKFVKDAVEDYDVDGIIGIAGTTELGTIDN---IE 191 (397)
T ss_dssp TCCCCSSCEEEEETTCCTHHHHHHHHHTCEEEEECBCT--TSSBCHHHHHHHHHHSCCCEEEEEBSCTTTCCBCC---HH
T ss_pred cccCCCCeEEEECCcchhHHHHHHHHcCceeEEEeeCC--CCcCCHHHHHHHHhhcCCeEEEEECCCCCCCCCCC---HH
Confidence 99999999999999999999999999998754 467899999999988 8999999999999999965 77
Q ss_pred HHHHHHhhcCcEEEEccccCCcccCCCCc-------ccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChH
Q 014936 197 KLAETANKLKTLVIADEVYGHLVFGDKPF-------VPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKP 269 (415)
Q Consensus 197 ~i~~~~~~~~~~li~De~~~~~~~~~~~~-------~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~ 269 (415)
+|.++|+++|+++|+||+|+.+.+...+. .....+.. ...+++.|++|. +.+|.|+|+++++++.
T Consensus 192 ~i~~l~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~~K~-~~~~~~~g~~~~~~~~------ 263 (397)
T 3f9t_A 192 ELSKIAKENNIYIHVDAAFGGLVIPFLDDKYKKKGVNYKFDFSL-GVDSITIDPHKM-GHCPIPSGGILFKDIG------ 263 (397)
T ss_dssp HHHHHHHHHTCEEEEECTTGGGTGGGCCGGGCCTTCCCCCSGGG-TCSEEECCTTTT-TCCCSSCEEEEESSGG------
T ss_pred HHHHHHHHhCCeEEEEccccchhhhhcccccccccccccccccc-cCCeEEEccccc-cCCCCCceEEEEeCHH------
Confidence 88999999999999999998765432110 00011111 234788899997 5678899999987632
Q ss_pred HHHHHHHhhccc------------cCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCC
Q 014936 270 KVVERMKKYFDI------------LGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEG 337 (415)
Q Consensus 270 ~~~~~~~~~~~~------------~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~ 337 (415)
+.+.+...... ....+...+.++...+. ...++++.++++++++++.+.|+++ ++..+ .+..
T Consensus 264 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~---~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~~ 337 (397)
T 3f9t_A 264 -YKRYLDVDAPYLTETRQATILGTRVGFGGACTYAVLRYLG---REGQRKIVNECMENTLYLYKKLKEN-NFKPV-IEPI 337 (397)
T ss_dssp -GGGGTCEECTTSSSSEECSSCSSCCSHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHT-TCCBS-SCCS
T ss_pred -HHHhhccCCccccCCCccccccccccchHHHHHHHHHHHh---HHHHHHHHHHHHHHHHHHHHHHHHC-CCEEE-cCCC
Confidence 33322211110 01235556666666654 3677888899999999999999988 77734 5556
Q ss_pred ceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEee--CChhhHHHHHHHHHHHHH
Q 014936 338 SMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFA--VDPYSLEECLDRIKSFYQ 406 (415)
Q Consensus 338 g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~--~~~~~l~~~l~~l~~~~~ 406 (415)
+.++++.++ +..++...+ .++||.+.++.. ++++||+++ ++++++++++++|+++++
T Consensus 338 ~~~~~~~~~--------~~~~~~~~l-~~~gi~v~~~~~---~~~~Ri~~~~~~~~e~i~~~~~~l~~~l~ 396 (397)
T 3f9t_A 338 LNIVAIEDE--------DYKEVCKKL-RDRGIYVSVCNC---VKALRIVVMPHIKREHIDNFIEILNSIKR 396 (397)
T ss_dssp SSEEEEECT--------THHHHHHHH-HHTTCBCEECSS---SSEEEEECCTTCCHHHHHHHHHHHHHHC-
T ss_pred ccEEEEEeC--------CHHHHHHHH-HhCCeEEeccCC---CCEEEEEEcCCCCHHHHHHHHHHHHHhhC
Confidence 777777764 345666666 456999998764 589999996 589999999999998764
No 100
>4eb5_A Probable cysteine desulfurase 2; scaffold, transferase-metal binding protein complex; HET: PLP EPE; 2.53A {Archaeoglobus fulgidus} PDB: 4eb7_A*
Probab=100.00 E-value=1.5e-33 Score=265.72 Aligned_cols=328 Identities=14% Similarity=0.086 Sum_probs=240.7
Q ss_pred CCCcHHHHHHHHHHHhcCC---CCCCCC----CCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhc--
Q 014936 51 FHTTHVATEAVAEALLSEK---FNGYAP----TAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLS-- 121 (415)
Q Consensus 51 ~~~~~~~~~a~~~~~~~~~---~~~y~~----~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~-- 121 (415)
.++++.+++++.+.+.... ...|.. .....++|+.+++++ +++++++++|+|+++++.+++.++.
T Consensus 10 ~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~------g~~~~~v~~~~g~t~a~~~~~~~l~~~ 83 (382)
T 4eb5_A 10 KPVDERILEAMLPYMTESFGNPSSVHSYGFKAREAVQEAREKVAKLV------NGGGGTVVFTSGATEANNLAIIGYAMR 83 (382)
T ss_dssp CCCCHHHHHHHHHHHHTSCCCTTCSSHHHHHHHHHHHHHHHHHHHHH------TCTTEEEEEESSHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHhccCCCCCCcHHHHHHHHHHHHHHHHHHHHh------CCCCCeEEEcCchHHHHHHHHHHHHhh
Confidence 3568999999999886411 111321 135677888888887 4567899999999999999999998
Q ss_pred --CCCCEEEEcCCCCcchHHHHH---hCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHH
Q 014936 122 --RPGANILLPRPGFPIYELSAA---FRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQ 196 (415)
Q Consensus 122 --~~gd~vi~~~p~y~~~~~~~~---~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~ 196 (415)
++||+|++++|+|+++...+. ..|++++.+++++ ++.+|+++|++.++++++++++++|+||||.+++ ++
T Consensus 84 ~~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~---l~ 158 (382)
T 4eb5_A 84 NARKGKHILVSAVEHMSVINPAKFLQKQGFEVEYIPVGK--YGEVDVSFIDQKLRDDTILVSVQHANNEIGTIQP---VE 158 (382)
T ss_dssp HGGGCCEEEEETTCCHHHHHHHHHHTTTTCEEEEECBCT--TSCBCHHHHHHHCCTTEEEEECCSBCTTTCBBCC---HH
T ss_pred ccCCCCEEEECCCcchHHHHHHHHHHhCCcEEEEeccCC--CCccCHHHHHHHhcCCCeEEEEeccCCCccccCC---HH
Confidence 899999999999998876654 3699999998753 4568999999999888999999999999999987 67
Q ss_pred HHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHHHH-
Q 014936 197 KLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERM- 275 (415)
Q Consensus 197 ~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~- 275 (415)
+|+++|+++|++ |+|++|+... ....+..++ ..++++|+||.++.+| +||++++++..+. ......
T Consensus 159 ~i~~l~~~~~~~-i~D~a~~~g~----~~~~~~~~~---~di~~~s~sK~~g~~g--~G~~~~~~~~~l~---~~~~~~~ 225 (382)
T 4eb5_A 159 EISEVLAGKAAL-HIDATASVGQ----IEVDVEKIG---ADMLTISSNDIYGPKG--VGALWIRKEAKLQ---PVILGGG 225 (382)
T ss_dssp HHHHHHTTSSEE-EEECTTTBTT----BCCCHHHHT---CSEEEEETGGGTCCSS--CEEEEEETTCCCC---CSSCSSC
T ss_pred HHHHHHHHCCCE-EEEcchhcCC----cccCccccC---CCEEEeehHHhcCCCc--eEEEEEccccccC---ceecCCC
Confidence 889999999999 9999998421 111222222 3488999999977666 7999987642111 000000
Q ss_pred HhhccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCC---ceEEEEecCccccCC
Q 014936 276 KKYFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEG---SMAVMLKLNLSLLDD 352 (415)
Q Consensus 276 ~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~---g~~~~~~l~~~~~~~ 352 (415)
.......++++...+.++..+++.. .+++++.+++++++++++.+.|+++|++. +..|.+ +.++++.++.
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~al~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~-~~~~~~~~~~~~~~~~~~~----- 298 (382)
T 4eb5_A 226 QENGLRSGSENVPSIVGFGKAAEIT-AMEWREEAERLRRLRDRIIDNVLKIEESY-LNGHPEKRLPNNVNVRFSY----- 298 (382)
T ss_dssp TGGGTSCSCCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHTTSTTEE-ECSCSSSBCTTEEEEEETT-----
T ss_pred ccccccCCCccHHHHHHHHHHHHHH-HHhHHHHHHHHHHHHHHHHHHHhhCCCeE-EeCCcccCCCCEEEEEeCC-----
Confidence 0011123455666666666666532 24578888999999999999999988877 334432 5567777652
Q ss_pred CCCHHHHHHHHHhhcCeEEEcCCCCCC-------------------CCeEEEEee--CChhhHHHHHHHHHHHHHHHHHH
Q 014936 353 IIDDIDFCFKLAKEESVIILPGTAVGL-------------------KNWLRVTFA--VDPYSLEECLDRIKSFYQRHAKQ 411 (415)
Q Consensus 353 ~~~~~~~~~~ll~~~gi~v~~g~~~~~-------------------~~~iRi~~~--~~~~~l~~~l~~l~~~~~~~~~~ 411 (415)
.+..++...+ .++||.+.+|..|.. .+++||+++ .++++++.++++|+++++++++.
T Consensus 299 -~~~~~~~~~l-~~~gi~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~~~~ 376 (382)
T 4eb5_A 299 -IEGESIVLSL-DMAGIQASTGSACSSKTLQPSHVLMACGLKHEEAHGTLLLTLGRYNTDEDVDRLLEVLPGVIERLRSM 376 (382)
T ss_dssp -SCHHHHHHHH-HHHTCBCBCCCGGGTSSCCCCHHHHHTTCCHHHHTTEEEEECCTTCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred -cCHHHHHHHH-HHCCEEEeccccccCCCCcccHHHHHcCCChhccCCeEEEECCCCCCHHHHHHHHHHHHHHHHHHHHh
Confidence 2466676666 567999999876432 479999996 58999999999999999887653
No 101
>2ch1_A 3-hydroxykynurenine transaminase; PLP-enzyme, kynurenine pathway, transferase; HET: LLP; 2.4A {Anopheles gambiae} SCOP: c.67.1.3 PDB: 2ch2_A*
Probab=100.00 E-value=4.9e-34 Score=270.39 Aligned_cols=321 Identities=11% Similarity=0.081 Sum_probs=241.7
Q ss_pred CCCcHHHHHHHHHHHhcCCCCCCCC-C-CCcHHHHHHHHHHHhhhCCCCCCCC-cEEEeCChHHHHHHHHHHhcCCCCEE
Q 014936 51 FHTTHVATEAVAEALLSEKFNGYAP-T-AGLPLTRRAIAEYLSRDLPYKLTPN-DVFVTSGCTQAIDVAMALLSRPGANI 127 (415)
Q Consensus 51 ~~~~~~~~~a~~~~~~~~~~~~y~~-~-~g~~~lr~~ia~~~~~~~~~~~~~~-~i~i~~g~~~al~~~~~~l~~~gd~v 127 (415)
.++++.+++++.+.+.. .|.+ + ....++|+.+++++ +.+++ ++++|+|+++++..++.++.++||+|
T Consensus 27 ~~~~~~v~~a~~~~~~~----~~~~~~~~~~~~l~~~la~~~------~~~~~~~v~~~~g~t~al~~~~~~~~~~gd~v 96 (396)
T 2ch1_A 27 SNCSKRVLTAMTNTVLS----NFHAELFRTMDEVKDGLRYIF------QTENRATMCVSGSAHAGMEAMLSNLLEEGDRV 96 (396)
T ss_dssp CCCCHHHHHHTTSCCCC----TTCHHHHHHHHHHHHHHHHHH------TCCCSCEEEESSCHHHHHHHHHHHHCCTTCEE
T ss_pred CCCCHHHHHHhcccccc----CCChhHHHHHHHHHHHHHHHh------CCCCCcEEEECCcHHHHHHHHHHHhcCCCCeE
Confidence 45678888877665432 2432 1 23789999999998 45677 89999999999999999999999999
Q ss_pred EEcCCCCcchH--HHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCC-CceEEEecCCCCccccCCCHHHHHHHHHHHhh
Q 014936 128 LLPRPGFPIYE--LSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ-NTVALVIINPGNPCGNVYSYQHLQKLAETANK 204 (415)
Q Consensus 128 i~~~p~y~~~~--~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~ 204 (415)
+++.|+|+++. ..++..|++++.++.+. ++.+|++++++.+++ ++++|++++|+||||.+++ +++|+++|++
T Consensus 97 l~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~---~~~i~~l~~~ 171 (396)
T 2ch1_A 97 LIAVNGIWAERAVEMSERYGADVRTIEGPP--DRPFSLETLARAIELHQPKCLFLTHGDSSSGLLQP---LEGVGQICHQ 171 (396)
T ss_dssp EEEESSHHHHHHHHHHHHTTCEEEEEECCT--TSCCCHHHHHHHHHHHCCSEEEEESEETTTTEECC---CTTHHHHHHH
T ss_pred EEEcCCcccHHHHHHHHHcCCceEEecCCC--CCCCCHHHHHHHHHhCCCCEEEEECCCCCCceecC---HHHHHHHHHH
Confidence 99999999874 47788999999998753 456899999999877 7899999999999999988 6788888889
Q ss_pred cCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhh------
Q 014936 205 LKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKY------ 278 (415)
Q Consensus 205 ~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~------ 278 (415)
+|+++|+||+|+... ....+..++. .+++.|++|.++. +.++|++++++ ++++.+...
T Consensus 172 ~~~~li~Dea~~~g~----~~~~~~~~~~---d~~~~s~~K~~~~-~~g~g~~~~~~--------~~~~~~~~~~~~~~~ 235 (396)
T 2ch1_A 172 HDCLLIVDAVASLCG----VPFYMDKWEI---DAVYTGAQKVLGA-PPGITPISISP--------KALDVIRNRRTKSKV 235 (396)
T ss_dssp TTCEEEEECTTTBTT----BCCCTTTTTC---CEEECCCC-CCCC-CSSCEEEEECH--------HHHHHHHTCSSCCSC
T ss_pred cCCEEEEEccccccC----CccchhhcCc---CEEEEcCCccccC-CCCeEEEEECH--------HHHHhhhhccCcccc
Confidence 999999999998422 2222222222 2667899997432 23469998865 455555321
Q ss_pred ------------------ccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCC---
Q 014936 279 ------------------FDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEG--- 337 (415)
Q Consensus 279 ------------------~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~--- 337 (415)
....++.+...+.++..+|+...++++++..++++++++++.+.|+++ ++. +..+.+
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~~~~~~ 313 (396)
T 2ch1_A 236 FYWDLLLLGNYWGCYDEPKRYHHTVASNLIFALREALAQIAEEGLENQIKRRIECAQILYEGLGKM-GLD-IFVKDPRHR 313 (396)
T ss_dssp GGGCHHHHHHHTTCSSSCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHH-TCC-BSSCSGGGB
T ss_pred eEechHHHHHhhhhhcccCCCCCCCcHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHC-CCe-eccCCcccc
Confidence 111245677778877777764333557788899999999999999988 777 334543
Q ss_pred -ceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEe-e--CChhhHHHHHHHHHHHHHHHH
Q 014936 338 -SMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTF-A--VDPYSLEECLDRIKSFYQRHA 409 (415)
Q Consensus 338 -g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~-~--~~~~~l~~~l~~l~~~~~~~~ 409 (415)
+.+++++++.. .+..++...+++++||.+.+|..+..++++||++ + .+++++++++++|+++++++.
T Consensus 314 ~~~~~~~~~~~~-----~~~~~~~~~L~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~e~i~~~~~~l~~~l~~~~ 384 (396)
T 2ch1_A 314 LPTVTGIMIPKG-----VDWWKVSQYAMNNFSLEVQGGLGPTFGKAWRVGIMGECSTVQKIQFYLYGFKESLKATH 384 (396)
T ss_dssp CTTEEEEECCTT-----CCHHHHHHHHHHHHCBCCBCCCGGGTTTEEEEECCGGGCSHHHHHHHHHHHHHHHHHHC
T ss_pred CCceEEEEcCCC-----CCHHHHHHHHHHhCCEEEecCccccCCCEEEEECCCCcCCHHHHHHHHHHHHHHHHHhC
Confidence 24778777531 2567777777666799999987666678999999 4 478999999999999988754
No 102
>1iug_A Putative aspartate aminotransferase; wild type, pyridoxal-5'-phosphate form, riken structural genomics/proteomics initiative, RSGI; HET: LLP; 2.20A {Thermus thermophilus} SCOP: c.67.1.3
Probab=100.00 E-value=9.4e-34 Score=264.10 Aligned_cols=316 Identities=19% Similarity=0.178 Sum_probs=235.6
Q ss_pred CCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEc
Q 014936 51 FHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLP 130 (415)
Q Consensus 51 ~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~ 130 (415)
.++++.+++++.+.+.. ...|....+..++|+.+++++ +++++++++|+|+++++.+++.++.++||+|+++
T Consensus 10 ~~~~~~v~~a~~~~~~~--~~~~~~~~~~~~l~~~la~~~------g~~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~ 81 (352)
T 1iug_A 10 VRLHPKALEALARPQLH--HRTEAAREVFLKARGLLREAF------RTEGEVLILTGSGTLAMEALVKNLFAPGERVLVP 81 (352)
T ss_dssp CCCCHHHHHHHHSCCCC--TTSHHHHHHHHHHHHHHHHHH------TCSSEEEEEESCHHHHHHHHHHHHCCTTCEEEEE
T ss_pred CCCCHHHHHHhccCCCC--ccCHHHHHHHHHHHHHHHHHh------CCCCceEEEcCchHHHHHHHHHhccCCCCeEEEE
Confidence 56789999999877642 111222235688999999998 4567899999999999999999999999999999
Q ss_pred CCCCcchH--HHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhc--C
Q 014936 131 RPGFPIYE--LSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKL--K 206 (415)
Q Consensus 131 ~p~y~~~~--~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~--~ 206 (415)
.|+|+++. ..++..|.+++.++.+. ++.+|++++++ ++++++++++|+||||.+++ +++|.++|+++ |
T Consensus 82 ~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~---~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~ 153 (352)
T 1iug_A 82 VYGKFSERFYEIALEAGLVVERLDYPY--GDTPRPEDVAK---EGYAGLLLVHSETSTGALAD---LPALARAFKEKNPE 153 (352)
T ss_dssp ECSHHHHHHHHHHHHTTCEEEEEECCT--TCCCCTTTSCC---SSCSEEEEESEETTTTEECC---HHHHHHHHHHHCTT
T ss_pred eCCchhHHHHHHHHHcCCceEEEeCCC--CCCCCHHHHhc---cCCcEEEEEEecCCcceecC---HHHHHHHHHhhCCC
Confidence 99999865 44566899999998753 34578888877 57889999999999999987 67888899999 9
Q ss_pred cEEEEccccCCcccCCCCcccccccCCCCCeEEEccCcccc-CCCCceEEEEEeeCCCCCCChHHHHHH---------HH
Q 014936 207 TLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRW-IVPGWRLGWFVTTDPCGMFRKPKVVER---------MK 276 (415)
Q Consensus 207 ~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~-~~~G~r~G~~~~~~~~~~~~~~~~~~~---------~~ 276 (415)
+++|+|++|+... ....+..++ ..+++.|+||++ +.+| +||+++++ ++++. +.
T Consensus 154 ~~li~D~a~~~~~----~~~~~~~~~---~d~~~~s~~K~~~~~~g--~G~~~~~~--------~~~~~~~~~~~~~~~~ 216 (352)
T 1iug_A 154 GLVGADMVTSLLV----GEVALEAMG---VDAAASGSQKGLMCPPG--LGFVALSP--------RALERLKPRGYYLDLA 216 (352)
T ss_dssp CEEEEECTTTBTT----BCCCSGGGT---CSEEEEESSSTTCCCSC--EEEEEECH--------HHHHTCCCCSSTTCHH
T ss_pred CEEEEECCccccC----cceeccccC---eeEEEecCcccccCCCc--eeEEEECH--------HHHHHhhCCCceeeHH
Confidence 9999999998522 111222222 347889999953 3334 89999865 33332 11
Q ss_pred ----hh--ccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCC-CceEEEEecCccc
Q 014936 277 ----KY--FDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPE-GSMAVMLKLNLSL 349 (415)
Q Consensus 277 ----~~--~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~-~g~~~~~~l~~~~ 349 (415)
.. ....++.+...+.++.++++... .++++.+++++++++++.+.|+++ ++. +..|. .+.++|++++..
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~-~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~~~~~~~~~~~~~~~- 292 (352)
T 1iug_A 217 RELKAQKEGESAWTPAINLVLAVAAVLEEVL-PRLEEHLALKAWQNALLYGVGEEG-GLR-PVPKRFSPAVAAFYLPEG- 292 (352)
T ss_dssp HHHHHHTTTCCSSCCCHHHHHHHHHHHHHHG-GGHHHHHHHHHHHHHHHHHHHHHT-TCE-ESCSSBCTTCEEEECCTT-
T ss_pred HHHhhcccCCCCCCCCHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHC-CCc-ccccccCCeEEEEEcCCC-
Confidence 11 12235667777777766665422 227788899999999999999988 777 43453 677888888631
Q ss_pred cCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEee--CChhhHHHHHHHHHHHHHHH
Q 014936 350 LDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFA--VDPYSLEECLDRIKSFYQRH 408 (415)
Q Consensus 350 ~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~--~~~~~l~~~l~~l~~~~~~~ 408 (415)
.+..++...+. ++||.+.+|..+..++++||+++ .+++++++++++|+++++++
T Consensus 293 ----~~~~~~~~~l~-~~gi~v~~~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~ 348 (352)
T 1iug_A 293 ----VPYARVKEAFA-QRGAVIAGGQGPLKGKVFRLSLMGAYDRYEALGVAGMFREVLEEI 348 (352)
T ss_dssp ----CCHHHHHHHHH-TTTEECEECCGGGTTTEEEECCCSSCCHHHHHHHHHHHHHHHHHH
T ss_pred ----CCHHHHHHHHH-HCCEEEEeCCCccCCCEEEEEccccCCHHHHHHHHHHHHHHHHHh
Confidence 24667777765 55999999885544689999996 47899999999999988765
No 103
>2eh6_A Acoat, acetylornithine aminotransferase; ARGD, structural genomics, NPPSFA, national project on prote structural and functional analyses; HET: PLP; 1.90A {Aquifex aeolicus}
Probab=100.00 E-value=1e-33 Score=266.22 Aligned_cols=322 Identities=16% Similarity=0.151 Sum_probs=240.8
Q ss_pred cCcceeEecccCCCCCCCCC-CcHHHHHHHHHHHhcC--CCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCCh
Q 014936 33 NEKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLSE--KFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGC 109 (415)
Q Consensus 33 ~~~~~i~l~~g~~~~~~~~~-~~~~~~~a~~~~~~~~--~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~ 109 (415)
++..++||+.+.|.. .++ +++.+.+++.+.+... ....|+. .+..++++.+++++ ++ ++++++++|+
T Consensus 26 ~g~~~ld~~~~~~~~--~~g~~~~~v~~a~~~~~~~~~~~~~~y~~-~~~~~l~~~la~~~------g~-~~~v~~~~g~ 95 (375)
T 2eh6_A 26 EGKEYLDFVSGIGVN--SLGHAYPKLTEALKEQVEKLLHVSNLYEN-PWQEELAHKLVKHF------WT-EGKVFFANSG 95 (375)
T ss_dssp TCCEEEESSHHHHTC--TTCBSCHHHHHHHHHHHHHCSCCCTTBCC-HHHHHHHHHHHHTS------SS-CEEEEEESSH
T ss_pred CCCEEEEcCCccccc--ccCCCCHHHHHHHHHHHHhccccCcccCC-HHHHHHHHHHHhhc------CC-CCeEEEeCch
Confidence 467899999997532 255 7899999999987642 1235644 56788999999986 33 4899999999
Q ss_pred HHHHHHHHHH---hc---CCC-CEEEEcCCCCcchHHHHHhCCCe-------------EEEeeccCCCCCCCChhHHHhh
Q 014936 110 TQAIDVAMAL---LS---RPG-ANILLPRPGFPIYELSAAFRHIE-------------VRHFDLLPDKGWEVDLDDIESL 169 (415)
Q Consensus 110 ~~al~~~~~~---l~---~~g-d~vi~~~p~y~~~~~~~~~~g~~-------------~~~~~~~~~~~~~~~~~~l~~~ 169 (415)
++++.+++.+ +. ++| |+|++++|+|+.+...+...+.. +..++. .|+++|+++
T Consensus 96 t~a~~~~~~~~~~~~~~~~~g~~~vl~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~~ 168 (375)
T 2eh6_A 96 TESVEAAIKLARKYWRDKGKNKWKFISFENSFHGRTYGSLSATGQPKFHKGFEPLVPGFSYAKL-------NDIDSVYKL 168 (375)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCCCEEEEEBTCCCCSSHHHHHHCBCGGGTTTTCSCCSSEEEECT-------TCHHHHHTT
T ss_pred HHHHHHHHHHHHHHhccCCCCCCEEEEECCCcCCCchhhhhhcCCccccCCCCCCCCCceeCCC-------chHHHHHHH
Confidence 9999999875 34 788 99999999999877655443322 222221 489999999
Q ss_pred cCCCceEEEecCCCCccccC-CCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccC
Q 014936 170 ADQNTVALVIINPGNPCGNV-YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWI 248 (415)
Q Consensus 170 ~~~~~~~v~i~~p~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~ 248 (415)
+++++++|++++|+||||.+ .+.+++++|+++|+++|+++|+||+|+++...+... .+..++...+++ ||||.++
T Consensus 169 l~~~~~~v~~~~~~~~tG~~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~-~~~~~~~~~d~~---s~SK~~~ 244 (375)
T 2eh6_A 169 LDEETAGIIIEVIQGEGGVNEASEDFLSKLQEICKEKDVLLIIDEVQTGIGRTGEFY-AYQHFNLKPDVI---ALAKGLG 244 (375)
T ss_dssp CCTTEEEEEECSEETTTTSEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSS-GGGGGTCCCSEE---EECGGGG
T ss_pred hcCCeEEEEEeCccCCCCCcCCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCcch-hhhhcCCCCCEE---EEccccc
Confidence 98889999999999999998 568889999999999999999999999755443221 233333222333 7889987
Q ss_pred CCCceEEEEEeeCCCCCCChHHHHHHHHhh-ccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCC
Q 014936 249 VPGWRLGWFVTTDPCGMFRKPKVVERMKKY-FDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIP 327 (415)
Q Consensus 249 ~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~ 327 (415)
+|+|+||+++++ ++++.++.. ...+.+.+++.+.++.++|+. +++..++++++++++.+.|++++
T Consensus 245 -~g~~~G~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-----~~~~~~~~~~~~~~l~~~L~~~~ 310 (375)
T 2eh6_A 245 -GGVPIGAILARE--------EVAQSFTPGSHGSTFGGNPLACRAGTVVVDE-----VEKLLPHVREVGNYFKEKLKELG 310 (375)
T ss_dssp -TTSCCEEEEEEH--------HHHTTCCTTSCCCSSTTCHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHTT
T ss_pred -CCCCeEEEEEcH--------HHHhhhcCCCCCCCCCCCHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHh
Confidence 699999999975 566555542 122345678888888777753 22677888999999999998874
Q ss_pred CCcCCCCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEee--CChhhHHHHHHHHHHH
Q 014936 328 CISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFA--VDPYSLEECLDRIKSF 404 (415)
Q Consensus 328 ~~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~--~~~~~l~~~l~~l~~~ 404 (415)
. . . .+..|+++|++++. +..++...++ ++||.+.|+. ++++|++++ .+++++++++++|+++
T Consensus 311 ~-~-~-~~~~g~~~~~~~~~-------~~~~~~~~l~-~~gi~~~~~~----~~~iRi~~~~~~~~~~i~~~~~~l~~~ 374 (375)
T 2eh6_A 311 K-G-K-VKGRGLMLGLELER-------ECKDYVLKAL-EKGLLINCTA----GKVLRFLPPLIIQKEHIDRAISVLREI 374 (375)
T ss_dssp S-S-E-EEEETTEEEEECSS-------CCHHHHHHHH-HTTEECEEET----TTEEEECCCTTCCHHHHHHHHHHHHHH
T ss_pred c-C-C-ceEEEEEEEEEEcC-------cHHHHHHHHH-HCCCEEecCC----CCEEEEECCCCCCHHHHHHHHHHHHHh
Confidence 3 3 2 35568899998863 3456777665 5799999863 589999984 6899999999999865
No 104
>3lvm_A Cysteine desulfurase; structural genomics, montreal-kingston bacterial structural genomics initiative, BSGI, transferase; HET: PLP; 2.05A {Escherichia coli} PDB: 3lvk_A* 3lvl_B* 3lvj_A* 1p3w_B*
Probab=100.00 E-value=1.2e-33 Score=270.15 Aligned_cols=333 Identities=14% Similarity=0.154 Sum_probs=243.8
Q ss_pred ccCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCC------------CCcHHHHHHHHHHHhhhCCCCCC
Q 014936 32 KNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPT------------AGLPLTRRAIAEYLSRDLPYKLT 99 (415)
Q Consensus 32 ~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~------------~g~~~lr~~ia~~~~~~~~~~~~ 99 (415)
..+++.+.|+.+.+ .++++.+.+++.+.+.... .|+.+ ....++++.+++++ +++
T Consensus 18 ~~~~~~iyld~~~~-----~~~~~~v~~a~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~------~~~ 84 (423)
T 3lvm_A 18 RAMKLPIYLDYSAT-----TPVDPRVAEKMMQFMTMDG--TFGNPASRSHRFGWQAEEAVDIARNQIADLV------GAD 84 (423)
T ss_dssp --CCSSEECBTTTC-----CCCCHHHHHHHTTSSSTTS--CCSCTTCTTSHHHHHHHHHHHHHHHHHHHHH------TCC
T ss_pred cccCCCEeecCCCc-----CCCCHHHHHHHHHHHhhcc--cccCCCccccchhHHHHHHHHHHHHHHHHHc------CCC
Confidence 34778888888764 3567889999988766111 22221 23467888888887 457
Q ss_pred CCcEEEeCChHHHHHHHHHHhcC----CCCEEEEcCCCCcchHHHH---HhCCCeEEEeeccCCCCCCCChhHHHhhcCC
Q 014936 100 PNDVFVTSGCTQAIDVAMALLSR----PGANILLPRPGFPIYELSA---AFRHIEVRHFDLLPDKGWEVDLDDIESLADQ 172 (415)
Q Consensus 100 ~~~i~i~~g~~~al~~~~~~l~~----~gd~vi~~~p~y~~~~~~~---~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~ 172 (415)
++++++|+|+++++.+++.++.+ +||+|+++.|+|+++...+ ...|+++..++.++ ++.+|+++|++++++
T Consensus 85 ~~~v~~~~ggt~a~~~a~~~l~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~ 162 (423)
T 3lvm_A 85 PREIVFTSGATESDNLAIKGAANFYQKKGKHIITSKTEHKAVLDTCRQLEREGFEVTYLAPQR--NGIIDLKELEAAMRD 162 (423)
T ss_dssp GGGEEEESSHHHHHHHHHHHHHHHHTTTCCEEEEETTSCHHHHHHHHHHHHTTCEEEEECCCT--TSCCCHHHHHHHCCT
T ss_pred CCeEEEeCChHHHHHHHHHHHHHhhccCCCEEEECCccchHHHHHHHHHHHcCCEEEEeccCC--CCccCHHHHHHhcCC
Confidence 78999999999999999998873 7999999999999987776 45599999998754 456899999999998
Q ss_pred CceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCc
Q 014936 173 NTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGW 252 (415)
Q Consensus 173 ~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~ 252 (415)
+++++++++|+||||.+++ +++|+++|+++|+++|+||+|+.... ...+...+ ..+++.|+||.++.+|
T Consensus 163 ~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~Dea~~~~~~----~~~~~~~~---~di~~~s~sK~~g~~g- 231 (423)
T 3lvm_A 163 DTILVSIMHVNNEIGVVQD---IAAIGEMCRARGIIYHVDATQSVGKL----PIDLSQLK---VDLMSFSGHKIYGPKG- 231 (423)
T ss_dssp TEEEEECCSBCTTTCBBCC---HHHHHHHHHHHTCEEEEECTTTTTTS----CCCTTTSC---CSEEEEESTTTTSCSS-
T ss_pred CcEEEEEeCCCCCCccccC---HHHHHHHHHHcCCEEEEEhhhhcCCC----CcChhhcC---CCEEEechHHhcCCCC-
Confidence 9999999999999999988 77788889999999999999986332 11222222 3488899999877666
Q ss_pred eEEEEEeeCCCCCCChHHHHHHHHhhc--------cccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhh
Q 014936 253 RLGWFVTTDPCGMFRKPKVVERMKKYF--------DILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIK 324 (415)
Q Consensus 253 r~G~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~ 324 (415)
+||++++++. .+.+.... ...++.+...+.++..+++.. ..++++..++++++++.+.+.|+
T Consensus 232 -~G~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~-~~~~~~~~~~~~~~~~~l~~~L~ 301 (423)
T 3lvm_A 232 -IGALYVRRKP--------RVRIEAQMHGGGHERGMRSGTLPVHQIVGMGEAYRIA-KEEMATEMERLRGLRNRLWNGIK 301 (423)
T ss_dssp -CEEEEECBTT--------BCCCCCSSCSSCTTTTTCCSCCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHT
T ss_pred -eEEEEEeccc--------cCCCCccccCCcccccccCCCCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHh
Confidence 8999987522 12222211 123455666666666666532 24478889999999999999999
Q ss_pred cCCCCcCCCCCCC---ceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCC-------------------CCe
Q 014936 325 EIPCISCPHKPEG---SMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGL-------------------KNW 382 (415)
Q Consensus 325 ~~~~~~~~~~p~~---g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~-------------------~~~ 382 (415)
++|++.++ .+.+ +.++++.++. .+..++...+ .+ |.+.+|..|.. .++
T Consensus 302 ~~~~~~~~-~~~~~~~~~~~~~~~~~------~~~~~l~~~l-~~--i~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~ 371 (423)
T 3lvm_A 302 DIEEVYLN-GDLEHGAPNILNVSFNY------VEGESLIMAL-KD--LAVSSGSACTSASLEPSYVLRALGLNDELAHSS 371 (423)
T ss_dssp TSTTEEEE-SCSTTBCTTEEEEEETT------SCHHHHHHHT-TT--EECBCCCC-----CCCCHHHHHHTCCHHHHHTE
T ss_pred cCCCEEEe-CCccccCCCeEEEEeCC------CCHHHHHHHH-hh--heeccCccccCCCccccHHHHHhCCCccccCce
Confidence 99888743 4432 3455555532 2455665554 44 88889877543 388
Q ss_pred EEEEee--CChhhHHHHHHHHHHHHHHHHH
Q 014936 383 LRVTFA--VDPYSLEECLDRIKSFYQRHAK 410 (415)
Q Consensus 383 iRi~~~--~~~~~l~~~l~~l~~~~~~~~~ 410 (415)
+||+++ .++++++.++++|+++++++++
T Consensus 372 iRi~~~~~~t~e~i~~~~~~l~~~~~~~~~ 401 (423)
T 3lvm_A 372 IRFSLGRFTTEEEIDYTIELVRKSIGRLRD 401 (423)
T ss_dssp EEEECCTTCCHHHHHHHHHHHHHHHHHHHT
T ss_pred EEEECCCCCCHHHHHHHHHHHHHHHHHhhc
Confidence 999995 5789999999999999988764
No 105
>4hvk_A Probable cysteine desulfurase 2; transferase and ISCS, transferase; HET: PMP PG4; 1.43A {Archaeoglobus fulgidus} PDB: 4eb7_A* 4eb5_A*
Probab=100.00 E-value=6.3e-33 Score=261.27 Aligned_cols=328 Identities=14% Similarity=0.108 Sum_probs=234.7
Q ss_pred CCCcHHHHHHHHHHHhcCCCCCCCCC---------CCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhc
Q 014936 51 FHTTHVATEAVAEALLSEKFNGYAPT---------AGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLS 121 (415)
Q Consensus 51 ~~~~~~~~~a~~~~~~~~~~~~y~~~---------~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~ 121 (415)
.++++.+.+++.+.+.... .++.. ....++++.+++++ +++++++++++|+++++.+++.++.
T Consensus 10 ~~~~~~v~~a~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~la~~~------~~~~~~i~~~~g~~~a~~~~~~~~~ 81 (382)
T 4hvk_A 10 KPVDERILEAMLPYMTESF--GNPSSVHSYGFKAREAVQEAREKVAKLV------NGGGGTVVFTSGATEANNLAIIGYA 81 (382)
T ss_dssp CCCCHHHHHHHHHHHHTSC--CCTTCSSHHHHHHHHHHHHHHHHHHHHT------TCTTEEEEEESSHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHhhc--CCCcccchHHHHHHHHHHHHHHHHHHHc------CCCcCeEEEECCchHHHHHHHHHhh
Confidence 4567899999999886421 22221 11236677777776 3567899999999999999999998
Q ss_pred ----CCCCEEEEcCCCCcchHHHHH---hCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHH
Q 014936 122 ----RPGANILLPRPGFPIYELSAA---FRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQH 194 (415)
Q Consensus 122 ----~~gd~vi~~~p~y~~~~~~~~---~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~ 194 (415)
++||+|+++.++|+++...+. ..|+++..++.+. ++.+|+++|+++++++++++++++|+||||.+++
T Consensus 82 ~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~--- 156 (382)
T 4hvk_A 82 MRNARKGKHILVSAVEHMSVINPAKFLQKQGFEVEYIPVGK--YGEVDVSFIDQKLRDDTILVSVQHANNEIGTIQP--- 156 (382)
T ss_dssp HHHGGGCCEEEEETTCCHHHHHHHHHHHHTTCEEEEECBCT--TSCBCHHHHHHHCCTTEEEEECCSBCTTTCBBCC---
T ss_pred hhhcCCCCEEEECCCCcHHHHHHHHHHHhcCCEEEEeccCC--CCCcCHHHHHHHhccCceEEEEECCCCCceeeCC---
Confidence 899999999999998876544 3699999998753 4568999999999989999999999999999977
Q ss_pred HHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHHH
Q 014936 195 LQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVER 274 (415)
Q Consensus 195 l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~ 274 (415)
+++|+++|+++|+ +|+|++|+.... ...+...+ ..+++.|+||.++.+| +|++++++...+. +.+...
T Consensus 157 ~~~i~~l~~~~~~-li~D~a~~~~~~----~~~~~~~~---~d~~~~s~~K~~g~~g--~g~~~~~~~~~~~--~~~~~~ 224 (382)
T 4hvk_A 157 VEEISEVLAGKAA-LHIDATASVGQI----EVDVEKIG---ADMLTISSNDIYGPKG--VGALWIRKEAKLQ--PVILGG 224 (382)
T ss_dssp HHHHHHHHSSSSE-EEEECTTTBTTB----CCCHHHHT---CSEEEEESGGGTSCTT--CEEEEEETTCCCC--CSSCSS
T ss_pred HHHHHHHHHHcCE-EEEEhHHhcCCC----CCCchhcC---CCEEEEeHHHhcCCCc--eEEEEEcCccCcC--cccccC
Confidence 6688889999999 999999875321 12222222 2388999999876666 7777776532111 000000
Q ss_pred HHhhccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCC---ceEEEEecCccccC
Q 014936 275 MKKYFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEG---SMAVMLKLNLSLLD 351 (415)
Q Consensus 275 ~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~---g~~~~~~l~~~~~~ 351 (415)
........++.+...+.++..+++. ..+++++..++++++++++.+.|+++|++.+. .+.+ +.++++.++.
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~al~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-~~~~~~~~~~~~~~~~~---- 298 (382)
T 4hvk_A 225 GQENGLRSGSENVPSIVGFGKAAEI-TAMEWREEAERLRRLRDRIIDNVLKIEESYLN-GHPEKRLPNNVNVRFSY---- 298 (382)
T ss_dssp CTGGGTSCSCCCHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHTTSTTEEEC-SCSSSBCTTEEEEEETT----
T ss_pred CCcCccccCCcCHHHHHHHHHHHHH-HHhhHHHHHHHHHHHHHHHHHHHhcCCCeEEe-CCccccCCCEEEEEECC----
Confidence 0001111345566677776666652 23577889999999999999999998888733 4432 3456666642
Q ss_pred CCCCHHHHHHHHHhhcCeEEEcCCCCCC-------------------CCeEEEEee--CChhhHHHHHHHHHHHHHHHHH
Q 014936 352 DIIDDIDFCFKLAKEESVIILPGTAVGL-------------------KNWLRVTFA--VDPYSLEECLDRIKSFYQRHAK 410 (415)
Q Consensus 352 ~~~~~~~~~~~ll~~~gi~v~~g~~~~~-------------------~~~iRi~~~--~~~~~l~~~l~~l~~~~~~~~~ 410 (415)
.+..++...+ .++||.+.+|..|.. ++++|++++ .++++++.++++|+++++++.+
T Consensus 299 --~~~~~~~~~l-~~~gi~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRl~~~~~~t~e~i~~~~~~l~~~~~~~~~ 375 (382)
T 4hvk_A 299 --IEGESIVLSL-DMAGIQASTGSACSSKTLQPSHVLMACGLKHEEAHGTLLLTLGRYNTDEDVDRLLEVLPGVIERLRS 375 (382)
T ss_dssp --CCHHHHHHHH-HHTTCBCBCC--------CCCHHHHHTTCCHHHHHTEEEEECCTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred --CCHHHHHHHH-HHCCEEEeeCCccCCCCCcchHHHHHcCCChhhcCCeEEEEcCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 2456666555 667999999976653 478999996 5789999999999999988766
Q ss_pred Hh
Q 014936 411 QL 412 (415)
Q Consensus 411 ~~ 412 (415)
..
T Consensus 376 ~~ 377 (382)
T 4hvk_A 376 MS 377 (382)
T ss_dssp TC
T ss_pred hc
Confidence 43
No 106
>1sff_A 4-aminobutyrate aminotransferase; enzyme complexes; HET: IK2; 1.90A {Escherichia coli} SCOP: c.67.1.4 PDB: 1sf2_A* 1szk_A* 1szu_A* 1szs_A*
Probab=100.00 E-value=4.5e-34 Score=273.37 Aligned_cols=347 Identities=13% Similarity=0.093 Sum_probs=239.5
Q ss_pred cCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCC--CCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChH
Q 014936 33 NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKF--NGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCT 110 (415)
Q Consensus 33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~--~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~ 110 (415)
.++.++||+.+.+....++ +++.+++++.+.+..... ..|.+..+..++++.|++++. + . .+++|++|+|++
T Consensus 39 ~g~~~id~~~~~~~~~lg~-~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~---~-~-~~~~v~~~~g~~ 112 (426)
T 1sff_A 39 EGREYLDFAGGIAVLNTGH-LHPKVVAAVEAQLKKLSHTCFQVLAYEPYLELCEIMNQKVP---G-D-FAKKTLLVTTGS 112 (426)
T ss_dssp TCCEEEESSHHHHTCTTCB-TCHHHHHHHHHHTTTCSCCCTTTEECHHHHHHHHHHHHHSS---C-S-SCEEEEEESSHH
T ss_pred CCCEEEEcccChhhcccCC-CCHHHHHHHHHHHHhCCCccccccCCHHHHHHHHHHHHhCC---c-c-cccEEEEeCchH
Confidence 4677899988874322222 678999999998865322 135556788999999999973 2 1 348999999999
Q ss_pred HHHHHHHH---HhcCCCCEEEEcCCCCcchHH-HHHhCCCe-------------EEEeeccCC---CCCCCChhHHHhhc
Q 014936 111 QAIDVAMA---LLSRPGANILLPRPGFPIYEL-SAAFRHIE-------------VRHFDLLPD---KGWEVDLDDIESLA 170 (415)
Q Consensus 111 ~al~~~~~---~l~~~gd~vi~~~p~y~~~~~-~~~~~g~~-------------~~~~~~~~~---~~~~~~~~~l~~~~ 170 (415)
+++..+++ .+.++| .|++++|+|+.+.. .+...|.+ +..++.+.. .++.+|+++|++++
T Consensus 113 ~a~~~~~~~a~~~~~~~-~vi~~~p~y~~~~~~~~~~~g~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~d~~~l~~~l 191 (426)
T 1sff_A 113 EAVENAVKIARAATKRS-GTIAFSGAYHGRTHYTLALTGKVNPYSAGMGLMPGHVYRALYPCPLHGISEDDAIASIHRIF 191 (426)
T ss_dssp HHHHHHHHHHHHHHTCC-EEEEETTCCCCSSHHHHHHSSCCTTTTTTSCCCCSSEEEECCCBGGGTBCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhCCC-eEEEECCCcCCCchHhhhhcCCccccccccCCCCCCcEEeCCCccccccchHHHHHHHHHHH
Confidence 99999988 677776 89999999987654 45555542 555665320 12346899999887
Q ss_pred C-----CCceEEEe-cCCCCccc-cCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccC
Q 014936 171 D-----QNTVALVI-INPGNPCG-NVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSL 243 (415)
Q Consensus 171 ~-----~~~~~v~i-~~p~nptG-~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~ 243 (415)
+ +++++|++ .+++| || .++|.+++++|+++|+++|+++|+||+|+++.+.+... .+...+. .+.+.||
T Consensus 192 ~~~~~~~~~~~v~~~p~~~n-tG~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~-~~~~~~~---~~di~s~ 266 (426)
T 1sff_A 192 KNDAAPEDIAAIVIEPVQGE-GGFYASSPAFMQRLRALCDEHGIMLIADEVQSGAGRTGTLF-AMEQMGV---APDLTTF 266 (426)
T ss_dssp HHTCCGGGEEEEEECSBCTT-TTSCBCCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSS-GGGGTTS---CCSEEEE
T ss_pred HhccCCCceEEEEEecccCC-CCcccCCHHHHHHHHHHHHHcCCEEEEechhhccCcccchh-hhhhcCC---CCCEEEE
Confidence 5 34555544 24467 99 78899999999999999999999999999876554321 1222221 1234489
Q ss_pred ccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhh-ccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHH
Q 014936 244 SKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKY-FDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNK 322 (415)
Q Consensus 244 sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~ 322 (415)
||+|++ |+|+||+++++ ++++.+... ...+.+.+++.+.++.++|+...+ +...++++++++.+.+.
T Consensus 267 sK~~~~-GlriG~~~~~~--------~~~~~l~~~~~~~~~~~~~~~~~a~~aal~~~~~---~~~~~~~~~~~~~l~~~ 334 (426)
T 1sff_A 267 AKSIAG-GFPLAGVTGRA--------EVMDAVAPGGLGGTYAGNPIACVAALEVLKVFEQ---ENLLQKANDLGQKLKDG 334 (426)
T ss_dssp CGGGGT-SSCCEEEEEEH--------HHHTTSCTTSBCCSSSSCHHHHHHHHHHHHHHHH---TTHHHHHHHHHHHHHHH
T ss_pred cccccC-CCceEEEEEcH--------HHHhhhccCCcCcCCCCCHHHHHHHHHHHHHHHh---cCHHHHHHHHHHHHHHH
Confidence 999886 99999999975 566655432 223456788899888877753211 13456666677777766
Q ss_pred hhc----CCCCcCCCCCCCceEEEEecCcccc---CCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEee--CChhh
Q 014936 323 IKE----IPCISCPHKPEGSMAVMLKLNLSLL---DDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFA--VDPYS 393 (415)
Q Consensus 323 l~~----~~~~~~~~~p~~g~~~~~~l~~~~~---~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~--~~~~~ 393 (415)
|++ ++.+. ...+ .|+++|++++.... +...+..++...++ ++||.+.||..+ .+++||+++ .++++
T Consensus 335 l~~~~~~~~~~~-~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~gi~v~~~~~~--~~~iRi~~~~~~~~~~ 409 (426)
T 1sff_A 335 LLAIAEKHPEIG-DVRG-LGAMIAIELFEDGDHNKPDAKLTAEIVARAR-DKGLILLSCGPY--YNVLRILVPLTIEDAQ 409 (426)
T ss_dssp HHHHHHTCTTEE-EEEE-ETTEEEEEEBGGGCTTSBCHHHHHHHHHHHH-HTTEECEEESTT--SCEEEECCCTTCCHHH
T ss_pred HHHHHHhCCCeE-EEEE-EEEEEEEEEecCccccCCChHHHHHHHHHHH-HCCcEEecCCCC--CCEEEEECCccCCHHH
Confidence 664 33332 2133 37899998853100 00012455666664 569999998764 589999984 68999
Q ss_pred HHHHHHHHHHHHHHH
Q 014936 394 LEECLDRIKSFYQRH 408 (415)
Q Consensus 394 l~~~l~~l~~~~~~~ 408 (415)
+++++++|+++++++
T Consensus 410 i~~~~~~l~~~l~~~ 424 (426)
T 1sff_A 410 IRQGLEIISQCFDEA 424 (426)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 999999999988754
No 107
>4adb_A Succinylornithine transaminase; transferase, PLP enzymes, aminotransferase; HET: PLP; 2.20A {Escherichia coli} PDB: 4adc_A* 4add_A* 4ade_A
Probab=100.00 E-value=1.5e-33 Score=267.93 Aligned_cols=336 Identities=20% Similarity=0.185 Sum_probs=241.5
Q ss_pred cCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCC--CCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChH
Q 014936 33 NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKF--NGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCT 110 (415)
Q Consensus 33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~--~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~ 110 (415)
+++.++||+.+.+....++ .+|.+.+++.+.+..... ..|+. ....++++.+++++ ..+++++|+|++
T Consensus 37 ~g~~~lD~~~~~~~~~lg~-~~p~v~~a~~~~~~~~~~~~~~~~~-~~~~~l~~~la~~~--------~~~~v~~~~gg~ 106 (406)
T 4adb_A 37 QGKEYIDFAGGIAVNALGH-AHPELREALNEQASKFWHTGNGYTN-EPVLRLAKKLIDAT--------FADRVFFCNSGA 106 (406)
T ss_dssp TCCEEEESSHHHHTCTTCB-TCHHHHHHHHHHHTTCSCCCTTSCC-HHHHHHHHHHHHHS--------SCSEEEEESSHH
T ss_pred CCCEEEECCCchhhcccCC-CCHHHHHHHHHHHHhcccccCCcCC-HHHHHHHHHHHhhC--------CCCeEEEeCcHH
Confidence 4678999998843222222 578999999998875321 22332 23456666666665 356999999999
Q ss_pred HHHHHHHHHhcC-------CC-CEEEEcCCCCcchHHHHHhCCC-------------eEEEeeccCCCCCCCChhHHHhh
Q 014936 111 QAIDVAMALLSR-------PG-ANILLPRPGFPIYELSAAFRHI-------------EVRHFDLLPDKGWEVDLDDIESL 169 (415)
Q Consensus 111 ~al~~~~~~l~~-------~g-d~vi~~~p~y~~~~~~~~~~g~-------------~~~~~~~~~~~~~~~~~~~l~~~ 169 (415)
+++..+++++.. +| |.|++++|+|+.+...+...+. ++..++. .|+++|+++
T Consensus 107 ~a~~~al~~~~~~~~~~~~~g~~~vi~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~~ 179 (406)
T 4adb_A 107 EANEAALKLARKFAHDRYGSHKSGIVAFKNAFHGRTLFTVSAGGQPAYSQDFAPLPADIRHAAY-------NDINSASAL 179 (406)
T ss_dssp HHHHHHHHHHHHHHHHHTCTTCCEEEEETTCCCCSSHHHHHHSSCGGGTGGGCSCCSSEEEECT-------TCHHHHHTT
T ss_pred HHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCCcHHHhhccCCccccccCCCCCCCceEeCC-------CcHHHHHHH
Confidence 999999998864 56 9999999999988665544443 2233322 379999999
Q ss_pred cCCCceEEEecCCCCccccCC--CHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCcccc
Q 014936 170 ADQNTVALVIINPGNPCGNVY--SYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRW 247 (415)
Q Consensus 170 ~~~~~~~v~i~~p~nptG~~~--~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~ 247 (415)
+++++++++++ |+||+|.++ +.+++++|+++|++||+++|+||+|+++.+.+... .+...+...+++ ||||.+
T Consensus 180 l~~~~~~v~~~-p~np~g~~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~-~~~~~~~~~d~~---t~sK~~ 254 (406)
T 4adb_A 180 IDDSTCAVIVE-PIQGEGGVVPASNAFLQGLRELCNRHNALLIFDEVQTGVGRTGELY-AYMHYGVTPDLL---TTAKAL 254 (406)
T ss_dssp CSTTEEEEEEC-SEETTTTSEECCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSS-HHHHHTCCCSEE---EECGGG
T ss_pred hcCCeEEEEEe-CCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccchhH-HHHhcCCCCCEE---Eechhh
Confidence 98888888887 999999988 99999999999999999999999999876655432 222333333344 679998
Q ss_pred CCCCceEEEEEeeCCCCCCChHHHHHHHHhhc-cccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcC
Q 014936 248 IVPGWRLGWFVTTDPCGMFRKPKVVERMKKYF-DILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEI 326 (415)
Q Consensus 248 ~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 326 (415)
+ +|+|+||+++++ ++++.+.... ..+.+.+++.+.++.++|+.... ++..++++++++++.+.|+++
T Consensus 255 ~-~G~r~G~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~---~~~~~~~~~~~~~l~~~l~~~ 322 (406)
T 4adb_A 255 G-GGFPVGALLATE--------ECARVMTVGTHGTTYGGNPLASAVAGKVLELINT---PEMLNGVKQRHDWFVERLNTI 322 (406)
T ss_dssp G-TTSCCEEEEECH--------HHHHTCCTTSSCCSSTTCHHHHHHHHHHHHHHSS---HHHHHHHHHHHHHHHHHHHHH
T ss_pred c-CCCCeEEEEEcH--------HHHhhhccCCcCCCCCCCHHHHHHHHHHHHHHHh---cCHHHHHHHHHHHHHHHHHHH
Confidence 8 899999999865 6777666542 33567788999888888764211 566777778888888877764
Q ss_pred CC-CcCC-CCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEe--eCChhhHHHHHHHHH
Q 014936 327 PC-ISCP-HKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTF--AVDPYSLEECLDRIK 402 (415)
Q Consensus 327 ~~-~~~~-~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~--~~~~~~l~~~l~~l~ 402 (415)
.. +..+ ..+..|.++++.++... ..+..++...++ ++||.+.|+. .+++|+++ ..+++++++++++|+
T Consensus 323 ~~~~~~~~~~~~~g~~~~~~~~~~~---~~~~~~~~~~l~-~~gi~v~~~~----~~~iRi~~~~~~~~e~i~~~~~~l~ 394 (406)
T 4adb_A 323 NHRYGLFSEVRGLGLLIGCVLNADY---AGQAKQISQEAA-KAGVMVLIAG----GNVVRFAPALNVSEEEVTTGLDRFA 394 (406)
T ss_dssp HHHHCCEEEEEEETTEEEEEECTTT---TTCHHHHHHHHH-HTTEECEESS----TTEEEECCCTTCCHHHHHHHHHHHH
T ss_pred HHhCCCceEEEEEEEEEEEEEeCCc---HHHHHHHHHHHH-HCCcEEeecC----CCeEEEECCCCCCHHHHHHHHHHHH
Confidence 11 1101 12335778888886421 013567777765 5599999865 58999965 578999999999999
Q ss_pred HHHHHHHH
Q 014936 403 SFYQRHAK 410 (415)
Q Consensus 403 ~~~~~~~~ 410 (415)
++++++.+
T Consensus 395 ~~l~~~~~ 402 (406)
T 4adb_A 395 AACEHFVS 402 (406)
T ss_dssp HHHHHHHC
T ss_pred HHHHHHHh
Confidence 99987654
No 108
>3zrp_A Serine-pyruvate aminotransferase (AGXT); HET: PLP; 1.75A {Sulfolobus solfataricus} PDB: 3zrq_A* 3zrr_A*
Probab=100.00 E-value=3.4e-33 Score=263.39 Aligned_cols=319 Identities=12% Similarity=0.126 Sum_probs=237.1
Q ss_pred CCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCC--CcEEEeCChHHHHHHHHHHhcCCCCEEE
Q 014936 51 FHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTP--NDVFVTSGCTQAIDVAMALLSRPGANIL 128 (415)
Q Consensus 51 ~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~--~~i~i~~g~~~al~~~~~~l~~~gd~vi 128 (415)
.++++.+++++.+.+.... .+.......++++.+++++ ++++ +++++|+|+++++. ++..+.++||+|+
T Consensus 11 ~~~~~~v~~a~~~~~~~~~--~~~~~~~~~~~~~~la~~~------~~~~~~~~v~~~~g~t~al~-~~~~~~~~gd~vi 81 (384)
T 3zrp_A 11 TTIKEDVLVAGLENNVGFT--SKEFVEALAYSLKGLRYVM------GASKNYQPLIIPGGGTSAME-SVTSLLKPNDKIL 81 (384)
T ss_dssp SCCCHHHHHHTTCCSCCTT--SHHHHHHHHHHHHHHHHHH------TCCTTSEEEEEESCHHHHHH-HGGGGCCTTCEEE
T ss_pred CCCCHHHHHHhhccccccc--cHHHHHHHHHHHHHHHHHh------CCCCCCcEEEEcCCcHHHHH-HHHhhcCCCCEEE
Confidence 5667888888766543211 1111234567788888877 3455 88999999999999 9999999999999
Q ss_pred EcCCCCcc--hHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCC-CceEEEecCCCCccccCCCHHHHHHHHHHHhhc
Q 014936 129 LPRPGFPI--YELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ-NTVALVIINPGNPCGNVYSYQHLQKLAETANKL 205 (415)
Q Consensus 129 ~~~p~y~~--~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~ 205 (415)
++.|+|++ +...++..|.+++.++.+. ++.+|++++++.+++ +++++++++|+||||.+++ +++|.++|+++
T Consensus 82 ~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~ 156 (384)
T 3zrp_A 82 VVSNGVFGDRWEQIFKRYPVNVKVLRPSP--GDYVKPGEVEEEVRKSEYKLVALTHVETSTGVREP---VKDVINKIRKY 156 (384)
T ss_dssp EECSSHHHHHHHHHHTTSSCEEEEECCST--TCCCCHHHHHHHHHHSCEEEEEEESEETTTTEECC---HHHHHHHHGGG
T ss_pred EecCCcchHHHHHHHHHcCCcEEEecCCC--CCCCCHHHHHHHHHhCCCcEEEEeCCCCCCceECc---HHHHHHHHHhc
Confidence 99999965 5566778899999998754 446899999999987 7899999999999999987 77889999999
Q ss_pred CcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHHHH----------
Q 014936 206 KTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERM---------- 275 (415)
Q Consensus 206 ~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~---------- 275 (415)
|+++|+|++|+.... ...+... +..+++.|+||+++. +.++||+++++ ++++.+
T Consensus 157 ~~~li~D~a~~~~~~----~~~~~~~---~~d~~~~s~~K~~~~-~~g~g~~~~~~--------~~~~~~~~~~~~~~~~ 220 (384)
T 3zrp_A 157 VELIVVDGVSSVGAE----EVKAEEW---NVDVYLTASQKALGS-AAGLGLLLLSP--------KALSILDSQNSIAGYY 220 (384)
T ss_dssp EEEEEEECTTTTTTS----CCCTTTT---TCSEEEEETTSTTCC-CSSEEEEEECH--------HHHHHHHHCCCSCCST
T ss_pred CCEEEEECcccccCc----ccccccc---CCCEEEecCcccccC-CCceEEEEECH--------HHHHHhcCCCCCCccc
Confidence 999999999986332 1122222 234889999998642 23499999865 555554
Q ss_pred ---Hhhc----------ccc-CCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCC----C
Q 014936 276 ---KKYF----------DIL-GDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPE----G 337 (415)
Q Consensus 276 ---~~~~----------~~~-~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~----~ 337 (415)
.... ... ++++...+.++..+++......+++..++++++++++.+.|+++ ++. +..+. .
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~~~~~~~ 298 (384)
T 3zrp_A 221 LDLRNWLPVMRGAEEGKAAYFATPPVHVILQLAEAFRLIEKEGIENRIKRHTMVASAIRAGLEAL-GLE-IVARRPESYS 298 (384)
T ss_dssp TCHHHHHHHHHHHHTTCCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCC-BSCSSGGGBC
T ss_pred ccHHHHHHHHHhhcccCCCcCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHC-CCe-EccCcccccC
Confidence 1111 111 25566666666666653223447888999999999999999988 777 33444 4
Q ss_pred ceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEee--CChhhHHHHHHHHHHHHHHHH
Q 014936 338 SMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFA--VDPYSLEECLDRIKSFYQRHA 409 (415)
Q Consensus 338 g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~--~~~~~l~~~l~~l~~~~~~~~ 409 (415)
+.++|+.++. .+..++...+. ++||.+.+|..+.. +++|+++. ++++++++++++|+++++++.
T Consensus 299 ~~~~~~~~~~------~~~~~~~~~l~-~~gi~v~~g~~~~~-~~iRi~~~~~~~~e~i~~~~~~l~~~l~~~~ 364 (384)
T 3zrp_A 299 NTVTGVILKV------ADPQKVLAGTV-NEGVEFAPGVHPAF-KYFRIGHMGWVTPNDAIIAISVIERTLRKLG 364 (384)
T ss_dssp SSEEEEECSS------SCHHHHHHHHH-TTTCCCEECCCTTC-CEEEEECCSSCCHHHHHHHHHHHHHHHHHHT
T ss_pred ccEEEEECCC------CCHHHHHHHHH-HCCEEEecCCCCCc-CEEEEeccccCCHHHHHHHHHHHHHHHHHcC
Confidence 6777888763 25667777765 45999999875443 89999985 689999999999999998754
No 109
>1v72_A Aldolase; PLP-dependent enzyme, lyase; HET: PLP; 2.05A {Pseudomonas putida} SCOP: c.67.1.1
Probab=100.00 E-value=8.6e-34 Score=264.76 Aligned_cols=329 Identities=10% Similarity=0.098 Sum_probs=234.2
Q ss_pred CcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHH
Q 014936 34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAI 113 (415)
Q Consensus 34 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al 113 (415)
.+.+++|+.+.+ .++++.+++++.+.... ....|+......++++.+++++ | .++++++++|+++++
T Consensus 6 ~~~~id~~~~~~-----~~~~~~v~~a~~~~~~~-~~~~~~~~~~~~~l~~~la~~~----g---~~~~v~~~~~gt~a~ 72 (356)
T 1v72_A 6 RPPALGFSSDNI-----AGASPEVAQALVKHSSG-QAGPYGTDELTAQVKRKFCEIF----E---RDVEVFLVPTGTAAN 72 (356)
T ss_dssp CCCCCBCSCGGG-----CCCCHHHHHHHHHTTSS-CCCSTTCSHHHHHHHHHHHHHH----T---SCCEEEEESCHHHHH
T ss_pred CCceEeeccCCc-----cCCCHHHHHHHHhhccC-cccccccchHHHHHHHHHHHHh----C---CCCcEEEeCCccHHH
Confidence 456889998863 45679999999887542 2235654444566666666665 3 345699999999999
Q ss_pred HHHHHHhcCCCCEEEEcCCCCcchHHH--HHhC--CCeEEEeeccCCCCCCCChhHHHh-hcCC-------CceEEEecC
Q 014936 114 DVAMALLSRPGANILLPRPGFPIYELS--AAFR--HIEVRHFDLLPDKGWEVDLDDIES-LADQ-------NTVALVIIN 181 (415)
Q Consensus 114 ~~~~~~l~~~gd~vi~~~p~y~~~~~~--~~~~--g~~~~~~~~~~~~~~~~~~~~l~~-~~~~-------~~~~v~i~~ 181 (415)
.+++.++.++||.|+++.|+|...... +... |.+++.++.+ ++.+|+++|++ ++++ ++++|++++
T Consensus 73 ~~al~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~---~~~~d~~~l~~~~i~~~~~~~~~~~~~v~~~~ 149 (356)
T 1v72_A 73 ALCLSAMTPPWGNIYCHPASHINNDECGAPEFFSNGAKLMTVDGP---AAKLDIVRLRERTREKVGDVHTTQPACVSITQ 149 (356)
T ss_dssp HHHHHTSCCTTEEEEECTTSHHHHSSTTHHHHHTTSCEEEECCCG---GGCCCHHHHHHHTTSSTTCTTSCEEEEEEEES
T ss_pred HHHHHHhcCCCCEEEEcCccchhhhhchHHHHHhCCcEEEEecCC---CCeEcHHHHHHHhhhcchhhccCCceEEEEEc
Confidence 999999999999999999999876655 6666 9999888763 35789999999 8875 578899999
Q ss_pred CCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCccc--CCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEe
Q 014936 182 PGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVF--GDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVT 259 (415)
Q Consensus 182 p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~--~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~ 259 (415)
|+| ||.+++.+++++|+++|++||+++|+|++|..+.. .+.....+ .+..... +++.|+||+ +.+ ...||+++
T Consensus 150 ~~~-tG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~-~~~~~~d-~~~~s~sK~-g~~-~G~g~~~~ 224 (356)
T 1v72_A 150 ATE-VGSIYTLDEIEAIGDVCKSSSLGLHMDGSRFANALVSLGCSPAEM-TWKAGVD-ALSFGATKN-GVL-AAEAIVLF 224 (356)
T ss_dssp SCT-TSCCCCHHHHHHHHHHHHHTTCEEEEEETTHHHHHHHHTCCTTTT-TGGGTCC-EEEECCGGG-TCS-SCEEEEES
T ss_pred CCC-CCccCCHHHHHHHHHHHHHcCCeEEEEchhhHhHhccCCCCHHHh-hhhhcCC-EEEEecccC-CCc-CccEEEEE
Confidence 987 99999999999999999999999999999976431 12211111 1111122 345589998 432 22347776
Q ss_pred eCCCCCCChHHHHHHHHhhccccC---CchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCC
Q 014936 260 TDPCGMFRKPKVVERMKKYFDILG---DPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPE 336 (415)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~ 336 (415)
++ ++++.+........ ......+.++...++. ..+.+..++++++++++.+.|++++++. +..|.
T Consensus 225 ~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~---~~~~~~~~~~~~~~~~l~~~L~~~~g~~-~~~~~ 292 (356)
T 1v72_A 225 NT--------SLATEMSYRRKRAGHLSSKMRFLSAQIDAYLTD---DLWLRNARKANAAAQRLAQGLEGLGGVE-VLGGT 292 (356)
T ss_dssp SG--------GGHHHHHHHHHHTTCCCSSTHHHHHHHHHHTST---THHHHHHHHHHHHHHHHHHHHTTCTTEE-EESCC
T ss_pred CH--------HHHhhHHHHhhccCchhhhHHHHHHHHHHHHHh---hhHHHHHHHHHHHHHHHHHHHhhCCCcE-EccCC
Confidence 43 45555544321111 1122333334455543 3445567788899999999999887887 43677
Q ss_pred CceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEee--CChhhHHHHHHHHHHHHHHH
Q 014936 337 GSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFA--VDPYSLEECLDRIKSFYQRH 408 (415)
Q Consensus 337 ~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~--~~~~~l~~~l~~l~~~~~~~ 408 (415)
+++++|++++ .++...+ .++||.+.||. |+ .+++|++++ ++++++++++++|++++++.
T Consensus 293 ~~~~~~~~~~----------~~~~~~l-~~~gi~v~~g~-~~-~~~iRi~~~~~~~~~~i~~~~~~l~~~l~~~ 353 (356)
T 1v72_A 293 EANILFCRLD----------SAMIDAL-LKAGFGFYHDR-WG-PNVVRFVTSFATTAEDVDHLLNQVRLAADRT 353 (356)
T ss_dssp CSSEEEEEEC----------HHHHHHH-HHTTCBCBCSS-SS-TTEEEEECCTTCCHHHHHHHHHHHHHTC---
T ss_pred CccEEEEEcC----------HHHHHHH-HhcCeEEeccc-cC-CCeEEEEecCCCCHHHHHHHHHHHHHHHHhh
Confidence 8889998774 2566666 56799999987 55 789999985 58999999999999887653
No 110
>3nnk_A Ureidoglycine-glyoxylate aminotransferase; PLP-dependent; HET: LLP; 2.58A {Klebsiella pneumoniae}
Probab=100.00 E-value=7.9e-33 Score=263.39 Aligned_cols=320 Identities=12% Similarity=0.015 Sum_probs=238.0
Q ss_pred CCCcHHHHHHHHHHHhcCCCCCCCC--CCCcHHHHHHHHHHHhhhCCCCCCCCc-EEEeCChHHHHHHHHHHhcCCCCEE
Q 014936 51 FHTTHVATEAVAEALLSEKFNGYAP--TAGLPLTRRAIAEYLSRDLPYKLTPND-VFVTSGCTQAIDVAMALLSRPGANI 127 (415)
Q Consensus 51 ~~~~~~~~~a~~~~~~~~~~~~y~~--~~g~~~lr~~ia~~~~~~~~~~~~~~~-i~i~~g~~~al~~~~~~l~~~gd~v 127 (415)
.++++.+.+++.+.+. ..|.+ .....++++.+++++ +.+.++ +++++|+++++..++.++.++||+|
T Consensus 22 ~~~~~~v~~a~~~~~~----~~~~~~~~~~~~~~~~~la~~~------~~~~~~~v~~~~sgt~al~~~~~~~~~~gd~V 91 (411)
T 3nnk_A 22 INADPRVLRAMSSQLI----GQYDPAMTHYMNEVMALYRGVF------RTENRWTMLVDGTSRAGIEAILVSAIRPGDKV 91 (411)
T ss_dssp CCCCHHHHHHHTSCCC----CTTCHHHHHHHHHHHHHHHHHH------TCCCSEEEEEESCHHHHHHHHHHHHCCTTCEE
T ss_pred CCCCHHHHHHhhcccc----ccccHHHHHHHHHHHHHHHHHh------CCCCCcEEEECCCcHHHHHHHHHHhcCCCCEE
Confidence 5677888888765431 12221 122356677777776 334554 7889999999999999999999999
Q ss_pred EEcCCCCcc--hHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCC-CceEEEecCCCCccccCCCHHHHHHHHHHHhh
Q 014936 128 LLPRPGFPI--YELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ-NTVALVIINPGNPCGNVYSYQHLQKLAETANK 204 (415)
Q Consensus 128 i~~~p~y~~--~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~ 204 (415)
+++.|+|++ +...++..|.+++.++.+ .++.+|+++|++++++ ++++|++++|+||||.+.+ +++|+++|++
T Consensus 92 l~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~ 166 (411)
T 3nnk_A 92 LVPVFGRFGHLLCEIARRCRAEVHTIEVP--WGEVFTPDQVEDAVKRIRPRLLLTVQGDTSTTMLQP---LAELGEICRR 166 (411)
T ss_dssp EEEECSHHHHHHHHHHHHTTCEEEEEECC--TTCCCCHHHHHHHHHHHCCSEEEEESEETTTTEECC---CTTHHHHHHH
T ss_pred EEecCCchHHHHHHHHHHcCCeEEEEecC--CCCCCCHHHHHHHHhhCCCeEEEEeCCCCCcceecc---HHHHHHHHHH
Confidence 999999987 888889999999999874 3456899999999976 8999999999999999977 6788888999
Q ss_pred cCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhhc-----
Q 014936 205 LKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYF----- 279 (415)
Q Consensus 205 ~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~----- 279 (415)
+|+++|+|++++.... ...+... ...+++.|+||++. ++.++|++++++ ++.+.+....
T Consensus 167 ~~~~li~Dea~~~~~~----~~~~~~~---~~d~~~~s~~K~l~-~~~g~g~~~~~~--------~~~~~~~~~~~~~~~ 230 (411)
T 3nnk_A 167 YDALFYTDATASLGGN----PLETDVW---GLDAVSAGMQKCLG-GPSGTSPITLSA--------RMEEAIRRRKCVEEG 230 (411)
T ss_dssp HTCEEEEECTTTBTTB----CCCTTTT---TCSEEECCSTTTTC-CCSSEEEEEECH--------HHHHHHHTTCCCCGG
T ss_pred cCCEEEEECCcccCCc----ccchhcc---CCcEEEecCccccC-CCCceEEEEECH--------HHHHHHhhccccccc
Confidence 9999999999876321 1122222 23488999999732 333589999865 5666665432
Q ss_pred --------------------------------cccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCC
Q 014936 280 --------------------------------DILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIP 327 (415)
Q Consensus 280 --------------------------------~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~ 327 (415)
...++.+...+.++..+++...+..+++..++++++++++.+.|+++
T Consensus 231 ~~g~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~- 309 (411)
T 3nnk_A 231 IRTDAHRDGDEEMIYSNYFDLGMVMDYWGPERLNHHTEATTALFGARECARLILQEGLDYGIARHKLHGDALVKGIQAM- 309 (411)
T ss_dssp GCCTTCCCCSSCCCSCSTTCHHHHHHHHSTTCCCCSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-
T ss_pred ccccccccccCCCCcccccchHHHHhhhccccCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHc-
Confidence 11245566777777666654322337888899999999999999987
Q ss_pred CCcCCCCCCC---ceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEe-e--CChhhHHHHHHHH
Q 014936 328 CISCPHKPEG---SMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTF-A--VDPYSLEECLDRI 401 (415)
Q Consensus 328 ~~~~~~~p~~---g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~-~--~~~~~l~~~l~~l 401 (415)
++..+ .+.+ +.++++.++.. .+..++...+++++||.+.+|......+++||++ + ++++++++++++|
T Consensus 310 g~~~~-~~~~~~~~~~~~~~~~~~-----~~~~~l~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~i~~~~~~l 383 (411)
T 3nnk_A 310 GLETF-GDLKHKMNNVLGVVIPQG-----INGDQARKLMLEDFGIEIGTSFGPLHGKVWRIGTMGYNARKDCVMTTLSAL 383 (411)
T ss_dssp TCCBC-SCGGGBCSSEEEEECCTT-----CCHHHHHHHHHHHHSEEEEECCGGGTTTEEEEECCGGGCSHHHHHHHHHHH
T ss_pred CCEeC-CCcccccccEEEEECCCC-----CCHHHHHHHHHHhcCeEEeCccCCCCCCEEEEeCccCcCCHHHHHHHHHHH
Confidence 77733 4433 67788887531 2567777777666799999986554568999998 4 4789999999999
Q ss_pred HHHHHHH
Q 014936 402 KSFYQRH 408 (415)
Q Consensus 402 ~~~~~~~ 408 (415)
+++++++
T Consensus 384 ~~~l~~~ 390 (411)
T 3nnk_A 384 EAVLNYL 390 (411)
T ss_dssp HHHHHHT
T ss_pred HHHHHHc
Confidence 9998764
No 111
>1svv_A Threonine aldolase; structural genomics, structural genomics of pathogenic proto SGPP, protein structure initiative, PSI; 2.10A {Leishmania major} SCOP: c.67.1.1
Probab=100.00 E-value=7.5e-33 Score=258.64 Aligned_cols=331 Identities=13% Similarity=0.064 Sum_probs=237.4
Q ss_pred CcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHH
Q 014936 34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAI 113 (415)
Q Consensus 34 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al 113 (415)
.+.+++|+.+.+ .++++.+++++.+.+. .|....|..++++.+++++.+.+| .+++++++|+|+++++
T Consensus 12 ~p~~i~l~~~~~-----~~~~~~v~~a~~~~~~-----~~~~~~g~~~~~~~~~~~l~~~~g--~~~~~v~~~~g~t~a~ 79 (359)
T 1svv_A 12 KPKPYSFVNDYS-----VGMHPKILDLMARDNM-----TQHAGYGQDSHCAKAARLIGELLE--RPDADVHFISGGTQTN 79 (359)
T ss_dssp ---CEECSCSCS-----SCCCHHHHHHHHHHTT-----CCCCSTTCSHHHHHHHHHHHHHHT--CTTSEEEEESCHHHHH
T ss_pred CCeeEEecCCCc-----CCCCHHHHHHHHHHHh-----hccccccccHHHHHHHHHHHHHhC--CCCccEEEeCCchHHH
Confidence 345799998653 2567999999998865 355555667888888888877666 5678999999999999
Q ss_pred HHHHHHhcCCCCEEEEcCCCCcchHH--HHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCC-------ceEEEecCCCC
Q 014936 114 DVAMALLSRPGANILLPRPGFPIYEL--SAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQN-------TVALVIINPGN 184 (415)
Q Consensus 114 ~~~~~~l~~~gd~vi~~~p~y~~~~~--~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~-------~~~v~i~~p~n 184 (415)
..++.++.++||+|+++.|+|+++.. .++..|.+++.++.+ ++.+|+++|++.++++ ++++++++| |
T Consensus 80 ~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~---~~~~d~~~l~~~l~~~~~~~~~~~~~v~~~~~-~ 155 (359)
T 1svv_A 80 LIACSLALRPWEAVIATQLGHISTHETGAIEATGHKVVTAPCP---DGKLRVADIESALHENRSEHMVIPKLVYISNT-T 155 (359)
T ss_dssp HHHHHHHCCTTEEEEEETTSHHHHSSTTHHHHTTCCEEEECCT---TSCCCHHHHHHHHHHSCSTTSCEEEEEEEESS-C
T ss_pred HHHHHHHhCCCCEEEEcccchHHHHHHHHHhcCCCeeEEEeCC---CCeecHHHHHHHHHHHHhccCCCceEEEEEcC-C
Confidence 99999999999999999999998877 478889999999863 5679999999988765 788999999 7
Q ss_pred ccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCC-CCCeEEEccCccccCCCCceEEEEEeeCCC
Q 014936 185 PCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS-TVPILTLGSLSKRWIVPGWRLGWFVTTDPC 263 (415)
Q Consensus 185 ptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~ 263 (415)
|||.++|.+++++|+++|+++|+++|+||+|..+.++..+. ....+.. ....++..|++|. +.+ ...|++++++
T Consensus 156 ptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~-~~~~~~~~~~~d~~~~s~~K~-g~~-~~~g~l~~~~-- 230 (359)
T 1svv_A 156 EVGTQYTKQELEDISASCKEHGLYLFLDGARLASALSSPVN-DLTLADIARLTDMFYIGATKA-GGM-FGEALIILND-- 230 (359)
T ss_dssp TTSCCCCHHHHHHHHHHHHHHTCEEEEECTTHHHHHTSTTC-CCCHHHHHHHCSEEEEECTTT-TCS-SCEEEEECSG--
T ss_pred CCceecCHHHHHHHHHHHHHhCCEEEEEccchhhhhcCCCc-chhhhhhhhcCCEEEEecccC-CCC-CceEEEEEcc--
Confidence 99999999999999999999999999999995432221111 1111000 0012677789997 332 4579988854
Q ss_pred CCCChHHHHHHHHhh---ccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceE
Q 014936 264 GMFRKPKVVERMKKY---FDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMA 340 (415)
Q Consensus 264 ~~~~~~~~~~~~~~~---~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~ 340 (415)
++++.+... .......+.....++..+++. ..+++..++++++++++.+.| +.+++. +..|.++++
T Consensus 231 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~---~~~~~~~~~~~~~~~~l~~~L-~~~~~~-~~~~~~~~~ 299 (359)
T 1svv_A 231 ------ALKPNARHLIKQRGALMAKGWLLGIQFEVLMKD---NLFFELGAHSNKMAAILKAGL-EACGIR-LAWPSASNQ 299 (359)
T ss_dssp ------GGCTTHHHHHHHTTCCCTTTHHHHHHHHHHTST---THHHHHHHHHHHHHHHHHHHH-HHTTCC-BSSCCSSSE
T ss_pred ------cHHHHHHHHHhcCCcccccchhhHHHHHHHHhh---hhHHHHHHHHHHHHHHHHHHh-ccCCeE-EccCCccce
Confidence 233333322 111111122223334455654 346788899999999999999 556887 446788889
Q ss_pred EEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEee--CChhhHHHHHHHHHHHHHH
Q 014936 341 VMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFA--VDPYSLEECLDRIKSFYQR 407 (415)
Q Consensus 341 ~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~--~~~~~l~~~l~~l~~~~~~ 407 (415)
+|++++ .++...+++++||.+.+.. ...++++|++++ .+++++++++++|++++++
T Consensus 300 ~~~~~~----------~~~~~~l~~~~gi~v~~~~-~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~ 357 (359)
T 1svv_A 300 LFPILE----------NTMIAELNNDFDMYTVEPL-KDGTCIMRLCTSWATEEKECHRFVEVLKRLVAS 357 (359)
T ss_dssp ECBEEE----------HHHHHHHTTTEECEEEEEE-TTTEEEEEEECCTTCCHHHHHHHHHHHHHC---
T ss_pred EEEEcC----------HHHHHHHHHhcCEEEEecc-cCCCceEEEEccCcCCHHHHHHHHHHHHHHHhc
Confidence 887663 3566666555599984311 123578999884 6899999999999988765
No 112
>3cai_A Possible aminotransferase; RV3778C; 1.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=8.2e-33 Score=262.90 Aligned_cols=327 Identities=12% Similarity=0.109 Sum_probs=239.6
Q ss_pred ceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCC---CCCC----CCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCC
Q 014936 36 KVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKF---NGYA----PTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSG 108 (415)
Q Consensus 36 ~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~---~~y~----~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g 108 (415)
+.+.|+.+.+. ++++.+++++.+.+..... ..|+ ...+..++|+.+++++ ++++++|++|+|
T Consensus 26 ~~~~ld~~~~~-----~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~------g~~~~~v~~~~g 94 (406)
T 3cai_A 26 GWVHFDAPAGM-----LIPDSVATTVSTAFRRSGASTVGAHPSARRSAAVLDAAREAVADLV------NADPGGVVLGAD 94 (406)
T ss_dssp SCEECBGGGCC-----CCCHHHHHHHHHHHHHCCSSSCSSSHHHHHHHHHHHHHHHHHHHHH------TCCGGGEEEESC
T ss_pred CeEEEeCCCcC-----CCCHHHHHHHHHHHHhcCCCCCCccHHHHHHHHHHHHHHHHHHHHh------CCCCCeEEEeCC
Confidence 46888887642 5678999999998764211 1232 1245688999999998 456789999999
Q ss_pred hHHHHHHHHHHh---cCCCCEEEEcCCCCcchHHHHHh----CCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecC
Q 014936 109 CTQAIDVAMALL---SRPGANILLPRPGFPIYELSAAF----RHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIIN 181 (415)
Q Consensus 109 ~~~al~~~~~~l---~~~gd~vi~~~p~y~~~~~~~~~----~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~ 181 (415)
+++++.+++.++ .++||+|+++.|+|+++...+.. .|.+++.+++++ .++.+|+++|++.+++++++|++++
T Consensus 95 ~t~al~~~~~~l~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~v~~v~~~~-~~~~~d~~~l~~~l~~~~~~v~~~~ 173 (406)
T 3cai_A 95 RAVLLSLLAEASSSRAGLGYEVIVSRLDDEANIAPWLRAAHRYGAKVKWAEVDI-ETGELPTWQWESLISKSTRLVAVNS 173 (406)
T ss_dssp HHHHHHHHHHHTGGGGBTTCEEEEETTSCGGGTHHHHHHHHHHBCEEEEECCCT-TTCCCCGGGHHHHCCTTEEEEEEES
T ss_pred hHHHHHHHHHHHhhccCCCCEEEEcCCccHHHHHHHHHHHHhcCCeEEEEecCc-ccCCcCHHHHHHHhCCCceEEEEeC
Confidence 999999999987 68999999999999986655443 699999998763 3456899999999988899999999
Q ss_pred CCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEE-EEEee
Q 014936 182 PGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLG-WFVTT 260 (415)
Q Consensus 182 p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G-~~~~~ 260 (415)
|+||||.+++ +++|.++|+++|+++|+|++|+... ....+..++ ..+++.|+||.++ ++ +| |++++
T Consensus 174 ~~nptG~~~~---l~~i~~l~~~~~~~li~D~a~~~g~----~~~~~~~~~---~d~~~~s~~K~~g-~~--~G~~~~~~ 240 (406)
T 3cai_A 174 ASGTLGGVTD---LRAMTKLVHDVGALVVVDHSAAAPY----RLLDIRETD---ADVVTVNAHAWGG-PP--IGAMVFRD 240 (406)
T ss_dssp BCTTTCBBCC---CHHHHHHHHHTTCEEEEECTTTTTT----CCCCHHHHC---CSEEEEEGGGGTS-CS--CEEEEESC
T ss_pred CcCCccccCC---HHHHHHHHHHcCCEEEEEcccccCC----CCCCchhcC---CCEEEeehhhhcC-CC--cCeEEEEe
Confidence 9999999987 6788888899999999999998522 112222333 3488899999864 44 89 99886
Q ss_pred CCCCCCChHHHHHHHHhhcc----------ccCCchhHHHHHHHHhhCCCcH--------------HHHHHHHHHHHHHH
Q 014936 261 DPCGMFRKPKVVERMKKYFD----------ILGDPATFIQAAVPSILQQPDE--------------VFFKKTLNLLKQSV 316 (415)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~a~~~~l~~~~~--------------~~~~~~~~~~~~~~ 316 (415)
+ ++.+.++.... ..++.+...+.++..+++.... .++++..+++++++
T Consensus 241 ~--------~~~~~l~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (406)
T 3cai_A 241 P--------SVMNSFGSVSTNPYATGPARLEIGVHQFGLLAGVVASIEYLAALDESARGSRRERLAVSMQSADAYLNRVF 312 (406)
T ss_dssp H--------HHHHTSCCCCSCTTCCGGGGGCCSCCCHHHHHHHHHHHHHHHTSSTTCCSSHHHHHHHHHHHHHHHHHHHH
T ss_pred h--------HHHhhcCCcccCCCCCccccccCCCccHHHHHHHHHHHHHHHHhccccccchhhhhhhhHHHHHHHHHHHH
Confidence 4 56655543321 1244566555554444432110 15788889999999
Q ss_pred HHHHHHhhcCCCCcCCCCCC--CceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCC------CCCC---CCeEEE
Q 014936 317 DICYNKIKEIPCISCPHKPE--GSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGT------AVGL---KNWLRV 385 (415)
Q Consensus 317 ~~l~~~l~~~~~~~~~~~p~--~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~------~~~~---~~~iRi 385 (415)
+++.+.|++++++. +..|. .+.++++.++. .+..++...+ .++||.+.+|. .++. .+++|+
T Consensus 313 ~~l~~~L~~~~~~~-~~~~~~~~~~~~~~~~~~------~~~~~~~~~L-~~~gi~v~~g~~~~~~~~~g~~~~~~~iRi 384 (406)
T 3cai_A 313 DYLMVSLRSLPLVM-LIGRPEAQIPVVSFAVHK------VPADRVVQRL-ADNGILAIANTGSRVLDVLGVNDVGGAVTV 384 (406)
T ss_dssp HHHHHHHHTCTTEE-ECCCCSSBCSEEEEEETT------BCHHHHHHHH-HHTTEECEECCSCHHHHHHTTTTTTCCEEE
T ss_pred HHHHHHHhcCCCeE-EcCCccccCCEEEEEECC------cCHHHHHHHH-HHCCcEEecCChHHHHHHcCCCCCCCeEEE
Confidence 99999999988877 33443 23367777652 1456666666 56799999987 3332 478999
Q ss_pred Eee--CChhhHHHHHHHHHH
Q 014936 386 TFA--VDPYSLEECLDRIKS 403 (415)
Q Consensus 386 ~~~--~~~~~l~~~l~~l~~ 403 (415)
+++ .++++++.++++|++
T Consensus 385 s~~~~~t~e~i~~~~~~l~~ 404 (406)
T 3cai_A 385 GLAHYSTMAEVDQLVRALAS 404 (406)
T ss_dssp ECCTTCCHHHHHHHHHHHHT
T ss_pred EeecCCCHHHHHHHHHHHHH
Confidence 996 478999999999875
No 113
>2ord_A Acoat, acetylornithine aminotransferase; TM1785, acetylornithine aminotransferase (EC 2.6.1.11) (ACOA structural genomics; HET: MSE PLP; 1.40A {Thermotoga maritima MSB8} PDB: 2e54_A*
Probab=100.00 E-value=7.2e-34 Score=269.37 Aligned_cols=330 Identities=12% Similarity=0.123 Sum_probs=233.4
Q ss_pred cCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCC--CCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChH
Q 014936 33 NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFN--GYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCT 110 (415)
Q Consensus 33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~--~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~ 110 (415)
+++.++||+.+......++ .++.+.+++.+.+...... .|+ .....++++.+++++ | .+++++++|++
T Consensus 38 ~g~~~ld~~~~~~~~~lg~-~~~~v~~a~~~~~~~~~~~~~~~~-~~~~~~l~~~la~~~----g----~~~v~~~~gg~ 107 (397)
T 2ord_A 38 KGNAYLDFTSGIAVNVLGH-SHPRLVEAIKDQAEKLIHCSNLFW-NRPQMELAELLSKNT----F----GGKVFFANTGT 107 (397)
T ss_dssp TCCEEEESSHHHHTCTTCB-TCHHHHHHHHHHHHHCSCCCTTSE-EHHHHHHHHHHHHTT----T----SCEEEEESSHH
T ss_pred CCCEEEECCccccccccCC-CCHHHHHHHHHHHHhcccCccccC-CHHHHHHHHHHHHhc----C----CCeEEEeCCHH
Confidence 3677899988731111122 5789999999988653211 121 122344555555544 3 58999999999
Q ss_pred HHHHHHHHHhcC------C-CCEEEEcCCCCcchHH-HHHhCCCe------------EEEeeccCCCCCCCChhHHHhhc
Q 014936 111 QAIDVAMALLSR------P-GANILLPRPGFPIYEL-SAAFRHIE------------VRHFDLLPDKGWEVDLDDIESLA 170 (415)
Q Consensus 111 ~al~~~~~~l~~------~-gd~vi~~~p~y~~~~~-~~~~~g~~------------~~~~~~~~~~~~~~~~~~l~~~~ 170 (415)
+++..+++++.. + ++.|++.+|+|++... .+...|.+ +..++. .|+++|++.+
T Consensus 108 ~a~~~al~~~~~~~~~~~~~~~~vi~~~~~yh~~~~~~~~~~g~~~~~~~~~p~~~~~~~~~~-------~d~~~l~~~l 180 (397)
T 2ord_A 108 EANEAAIKIARKYGKKKSEKKYRILSAHNSFHGRTLGSLTATGQPKYQKPFEPLVPGFEYFEF-------NNVEDLRRKM 180 (397)
T ss_dssp HHHHHHHHHHHHHHHHHCTTCCEEEEEBTCCCCSSHHHHHHSBCHHHHGGGCSCCTTEEEECT-------TCHHHHHHHC
T ss_pred HHHHHHHHHHHHHhhcCCCCCceEEEEcCCcCCCchhhhhccCChhhccccCCCCCCeeEecC-------CCHHHHHHHh
Confidence 999999998863 4 4789999999976544 66667765 555543 2899999999
Q ss_pred CCCceEEEecCCCCcccc-CCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCC
Q 014936 171 DQNTVALVIINPGNPCGN-VYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIV 249 (415)
Q Consensus 171 ~~~~~~v~i~~p~nptG~-~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~ 249 (415)
++++++|++++|+||||. +++.+++++|+++|+++|+++|+||+|.++.+.+.. ..+..++...+++ ||||.++
T Consensus 181 ~~~~~~v~~~~~~nptG~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~-~~~~~~~~~~d~~---s~sK~~~- 255 (397)
T 2ord_A 181 SEDVCAVFLEPIQGESGIVPATKEFLEEARKLCDEYDALLVFDEVQCGMGRTGKL-FAYQKYGVVPDVL---TTAKGLG- 255 (397)
T ss_dssp CTTEEEEEECSEECTTTCEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSS-SHHHHHTCCCSEE---EECGGGG-
T ss_pred hcCeEEEEEecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEecccCCccCccc-hhhhhhCCCCCee---eeccccC-
Confidence 888999999999999999 999999999999999999999999999976655532 2223333222233 7899987
Q ss_pred CCceEEEEEeeCCCCCCChHHHHHHHHhh-ccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCC-
Q 014936 250 PGWRLGWFVTTDPCGMFRKPKVVERMKKY-FDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIP- 327 (415)
Q Consensus 250 ~G~r~G~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~- 327 (415)
+|+|+||++++++ ++ .++.. ...+++.+++.+.++.++|+...+ ++..++++++++++.+.|++++
T Consensus 256 ~G~r~G~~~~~~~--------~~-~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~---~~~~~~~~~~~~~l~~~L~~~~~ 323 (397)
T 2ord_A 256 GGVPIGAVIVNER--------AN-VLEPGDHGTTFGGNPLACRAGVTVIKELTK---EGFLEEVEEKGNYLMKKLQEMKE 323 (397)
T ss_dssp TTSCCEEEEECST--------TC-CCCTTSSCCSSTTCHHHHHHHHHHHHHHTS---TTHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCcCeEEEEEchH--------hc-ccCCCCcCCCCCCCHHHHHHHHHHHHHHHh---CCHHHHHHHHHHHHHHHHHHHHH
Confidence 8999999999762 33 33321 223456788888888888754221 3567778888888888887642
Q ss_pred CCcCC-CCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEe--eCChhhHHHHHHHHHHH
Q 014936 328 CISCP-HKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTF--AVDPYSLEECLDRIKSF 404 (415)
Q Consensus 328 ~~~~~-~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~--~~~~~~l~~~l~~l~~~ 404 (415)
++..+ ..+..|.++|++++.. .+..++...++ ++||.+.|+. ++++|+++ ..+++++++++++|+++
T Consensus 324 ~~~~~~~~~~~g~~~~~~~~~~-----~~~~~l~~~l~-~~gi~v~~~~----~~~iRis~~~~~~~e~i~~~~~~l~~~ 393 (397)
T 2ord_A 324 EYDVVADVRGMGLMIGIQFREE-----VSNREVATKCF-ENKLLVVPAG----NNTIRFLPPLTVEYGEIDLAVETLKKV 393 (397)
T ss_dssp HCTTEEEEEEETTEEEEEECTT-----SCHHHHHHHHH-HTTEECEEET----TTEEEECCCTTCCHHHHHHHHHHHHHH
T ss_pred hCCceEEEEEEeEEEEEEECCh-----HHHHHHHHHHH-HCCCEEccCC----CCEEEEECCcCCCHHHHHHHHHHHHHH
Confidence 22211 1234567888887631 14667777765 4799999874 57999996 47899999999999988
Q ss_pred HH
Q 014936 405 YQ 406 (415)
Q Consensus 405 ~~ 406 (415)
++
T Consensus 394 l~ 395 (397)
T 2ord_A 394 LQ 395 (397)
T ss_dssp HH
T ss_pred Hh
Confidence 75
No 114
>2yrr_A Aminotransferase, class V; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; HET: PLP; 1.86A {Thermus thermophilus} PDB: 2yri_A*
Probab=100.00 E-value=2.1e-33 Score=261.76 Aligned_cols=317 Identities=12% Similarity=0.052 Sum_probs=235.2
Q ss_pred CCCcHHHHHHHHHHHhcCCCCCCCC-CCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEE
Q 014936 51 FHTTHVATEAVAEALLSEKFNGYAP-TAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILL 129 (415)
Q Consensus 51 ~~~~~~~~~a~~~~~~~~~~~~y~~-~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~ 129 (415)
.++++.+++++.+.+.. ..|+. ..+..++|+.++++++ ...+++++++|+|+++++..++.++.+ |+|++
T Consensus 9 ~~~~~~v~~a~~~~~~~---~~~~~~~~~~~~l~~~la~~~g----~~~~~~~v~~t~g~t~a~~~~~~~~~~--d~vl~ 79 (353)
T 2yrr_A 9 TPIPERVQKALLRPMRG---HLDPEVLRVNRAIQERLAALFD----PGEGALVAALAGSGSLGMEAGLANLDR--GPVLV 79 (353)
T ss_dssp CCCCHHHHGGGGSCCCC---TTCHHHHHHHHHHHHHHHHHHC----CCTTCEEEEESSCHHHHHHHHHHTCSC--CCEEE
T ss_pred CCCCHHHHHHHhccccc---ccCHHHHHHHHHHHHHHHHHhC----CCCCCceEEEcCCcHHHHHHHHHHhcC--CcEEE
Confidence 56788899888776653 22322 2346788888888873 222468899999999999999999876 89999
Q ss_pred cCCCCcch--HHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCC-CceEEEecCCCCccccCCCHHHHHHHHHHHhhcC
Q 014936 130 PRPGFPIY--ELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ-NTVALVIINPGNPCGNVYSYQHLQKLAETANKLK 206 (415)
Q Consensus 130 ~~p~y~~~--~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~ 206 (415)
+.++|+++ ...++..|.+++.++.++ ++.+|++++++.+++ +++++++++|+||||.+++ +++|.++|+++|
T Consensus 80 ~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~---~~~i~~l~~~~~ 154 (353)
T 2yrr_A 80 LVNGAFSQRVAEMAALHGLDPEVLDFPP--GEPVDPEAVARALKRRRYRMVALVHGETSTGVLNP---AEAIGALAKEAG 154 (353)
T ss_dssp EECSHHHHHHHHHHHHTTCCEEEEECCT--TSCCCHHHHHHHHHHSCCSEEEEESEETTTTEECC---HHHHHHHHHHHT
T ss_pred EcCCCchHHHHHHHHHcCCceEEEeCCC--CCCCCHHHHHHHHHhCCCCEEEEEccCCCcceecC---HHHHHHHHHHcC
Confidence 99999875 455677899999998753 456899999999877 7899999999999999987 668888899999
Q ss_pred cEEEEccccCCcccCCCCcccccccCCCCCeEEEccCcccc-CCCCceEEEEEeeCCCCCCChHHHHHHHHh--------
Q 014936 207 TLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRW-IVPGWRLGWFVTTDPCGMFRKPKVVERMKK-------- 277 (415)
Q Consensus 207 ~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~-~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~-------- 277 (415)
+++|+|++|+... ...++..++. .+++.|++|++ +.+| +||+++++ ++++.++.
T Consensus 155 ~~li~D~a~~~~~----~~~~~~~~~~---d~~~~s~~K~~~~~~g--~G~~~~~~--------~~~~~l~~~~~~~~~~ 217 (353)
T 2yrr_A 155 ALFFLDAVTTLGM----LPFSMRAMGV---DYAFTGSQKCLSAPPG--LAPIAASL--------EARKAFTGKRGWYLDL 217 (353)
T ss_dssp CEEEEECTTTTTT----SCCCHHHHTC---SEEECCTTSTTCCCSS--CEEEEECH--------HHHHHCCCCSCSTTCH
T ss_pred CeEEEEcCccccc----ccccccccCc---eEEEecCcccccCCCc--eEEEEECH--------HHHHHhccCCCccccH
Confidence 9999999997532 1222333332 37788999964 4456 79999865 45554430
Q ss_pred --------hccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCC--CceEEEEecCc
Q 014936 278 --------YFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPE--GSMAVMLKLNL 347 (415)
Q Consensus 278 --------~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~--~g~~~~~~l~~ 347 (415)
.....++.+...+.++..+++...+..+++.+++++++++++.+.|+++ ++..+ .+. .++++|++++.
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~~~~~~~~~~~~~~ 295 (353)
T 2yrr_A 218 ARVAEHWERGGYHHTTPVLLHYALLEALDLVLEEGVAARERRAREVYAWVLEELKAR-GFRPY-PKASPLPTVLVVRPPE 295 (353)
T ss_dssp HHHHHHHTTCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCEES-CSSSBCTTEEEEECCT
T ss_pred HHHhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHC-CCccc-cCccCCCeEEEEECCC
Confidence 1122345677777777666654222337788899999999999999987 77733 343 56667787753
Q ss_pred cccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEe-e-CChhhHH-HHHHHHHHHHH
Q 014936 348 SLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTF-A-VDPYSLE-ECLDRIKSFYQ 406 (415)
Q Consensus 348 ~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~-~-~~~~~l~-~~l~~l~~~~~ 406 (415)
. .+..++...+. ++||.+.+|..|..++++|+++ . .++++++ +++++|+++++
T Consensus 296 ~-----~~~~~~~~~l~-~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~~~l~~~l~ 351 (353)
T 2yrr_A 296 G-----VDADRLVRALY-AEGVAVAGGIGPTRGQVLRLGLMGEGARREAYQAFLKALDRALA 351 (353)
T ss_dssp T-----CCHHHHHHHHH-HTTEECEECCGGGTTTCEEEECSGGGSCHHHHHHHHHHHHHHHH
T ss_pred C-----CCHHHHHHHHH-HCCEEEeCCccccCCCeEEEecCccCCHHHHHHHHHHHHHHHHh
Confidence 1 24667777665 5599999998777778999999 3 6788888 99999998765
No 115
>3isl_A Purine catabolism protein PUCG; pyridoxalphosphate, PLP dependent enzymes, purine metabolism transaminases, aminotransferases; HET: PLP; 2.06A {Bacillus subtilis}
Probab=100.00 E-value=3e-32 Score=259.77 Aligned_cols=320 Identities=13% Similarity=0.061 Sum_probs=233.7
Q ss_pred CCCcHHHHHHHHHHHhcCCCCCCCC--CCCcHHHHHHHHHHHhhhCCCCCCCCcEE-EeCChHHHHHHHHHHhcCCCCEE
Q 014936 51 FHTTHVATEAVAEALLSEKFNGYAP--TAGLPLTRRAIAEYLSRDLPYKLTPNDVF-VTSGCTQAIDVAMALLSRPGANI 127 (415)
Q Consensus 51 ~~~~~~~~~a~~~~~~~~~~~~y~~--~~g~~~lr~~ia~~~~~~~~~~~~~~~i~-i~~g~~~al~~~~~~l~~~gd~v 127 (415)
.++++++.+++.+ .....|++ .....++++.+++++ +++++.++ +++|+++++..++.++.++||+|
T Consensus 20 ~~~~~~v~~a~~~----~~~~~~~~~~~~~~~~l~~~la~~~------g~~~~~~~~~~~s~t~al~~~~~~l~~~gd~V 89 (416)
T 3isl_A 20 VEVDPRVLRVMST----PVVGQFDPAFTGIMNETMEMLRELF------QTKNRWAYPIDGTSRAGIEAVLASVIEPEDDV 89 (416)
T ss_dssp CCCCHHHHHHTTS----CCCCTTSHHHHHHHHHHHHHHHHHT------TCCCSEEEEEESCHHHHHHHHHHHHCCTTCEE
T ss_pred cCcCHHHHHHhcc----cCCCCccHHHHHHHHHHHHHHHHHh------CCCCCcEEEecCcHHHHHHHHHHHhcCCCCEE
Confidence 4456777666544 22223332 123456666666666 34566665 88999999999999999999999
Q ss_pred EEcCCCCcc--hHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcC-CCceEEEecCCCCccccCCCHHHHHHHHHHHhh
Q 014936 128 LLPRPGFPI--YELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLAD-QNTVALVIINPGNPCGNVYSYQHLQKLAETANK 204 (415)
Q Consensus 128 i~~~p~y~~--~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~ 204 (415)
+++.|+|++ +...++..|++++.++.+. ++.+|+++|+++++ +++++|++++|+||||.+++ +++|+++|++
T Consensus 90 l~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~ 164 (416)
T 3isl_A 90 LIPIYGRFGYLLTEIAERYGANVHMLECEW--GTVFDPEDIIREIKKVKPKIVAMVHGETSTGRIHP---LKAIGEACRT 164 (416)
T ss_dssp EEEESSHHHHHHHHHHHHTTCEEEEEECCT--TCCCCHHHHHHHHHHHCCSEEEEESEETTTTEECC---CHHHHHHHHH
T ss_pred EEecCCcccHHHHHHHHhcCCeeEEEecCC--CCCCCHHHHHHHHhhCCCcEEEEEccCCCCceecC---HHHHHHHHHH
Confidence 999999997 6778889999999999864 34689999999997 58899999999999999977 7788889999
Q ss_pred cCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhh------
Q 014936 205 LKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKY------ 278 (415)
Q Consensus 205 ~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~------ 278 (415)
+|+++|+|++|+.... ...+...+ ..+++.|+||++ .++.++|++++++ ++++.+...
T Consensus 165 ~~~~li~D~a~~~~~~----~~~~~~~~---~d~~~~s~~K~l-~g~~g~g~~~~~~--------~~~~~~~~~~~~~~G 228 (416)
T 3isl_A 165 EDALFIVDAVATIGGC----EVKVDEWK---IDAAIGGTQKCL-SVPSGMAPITYNE--------RVADVIAARKKVERG 228 (416)
T ss_dssp TTCEEEEECTTTTTTS----CCCTTTTT---CSEEECCSSSTT-CCCSSEEEEEECH--------HHHHHHHTC------
T ss_pred cCCEEEEECCccccCC----CcchhhcC---CCEEEecCcccc-CCCCCeEEEEECH--------HHHHHhhcccccccc
Confidence 9999999999985332 11222222 348899999973 2334589999865 566655421
Q ss_pred ---------------------------------ccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhc
Q 014936 279 ---------------------------------FDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKE 325 (415)
Q Consensus 279 ---------------------------------~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 325 (415)
....++.+...+.++.++++...+..+++..++++++++++.+.|++
T Consensus 229 w~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~ 308 (416)
T 3isl_A 229 IATQADRAALSGNRPITSNYFDLSQLEDYWSERRLNHHTEATTMLYALREGVRLVLEEGLETRFERHRHHEAALAAGIKA 308 (416)
T ss_dssp ------------CCCCSCSTTCHHHHHHHTSTTCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccccccchhccCCCCCCccccchHHHHhhhcccCCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHH
Confidence 11133556677777767765422222788999999999999999998
Q ss_pred CCCCcCCCCCCC---ceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEe-e-CChhh-HHHHHH
Q 014936 326 IPCISCPHKPEG---SMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTF-A-VDPYS-LEECLD 399 (415)
Q Consensus 326 ~~~~~~~~~p~~---g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~-~-~~~~~-l~~~l~ 399 (415)
+ ++.++ .+.+ +.++++.++.. .+..++...+++++||.+.+|.....++++|+++ . .++++ ++++++
T Consensus 309 ~-g~~~~-~~~~~~~~~~~~~~~~~~-----~~~~~l~~~L~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~e~i~~~~~ 381 (416)
T 3isl_A 309 M-GLRLF-GDDSCKMPVVTCVEIPGG-----IDGESVRDMLLAQFGIEIASSFGPLAGKIWRIGTMGYSCRKENVLFVLA 381 (416)
T ss_dssp T-TCCBC-SCGGGBCTTEEEEECCTT-----CCHHHHHHHHHHHHCEECBCCCSTTTTTEEEEECCGGGCSHHHHHHHHH
T ss_pred c-CCEec-cCccccCCcEEEEeCCCC-----CCHHHHHHHHHHhCCEEEecCCCCCCCCEEEEecccCCCcHHHHHHHHH
Confidence 6 77733 4443 56788877531 2567787877666699999987655578999999 2 34555 999999
Q ss_pred HHHHHHHHH
Q 014936 400 RIKSFYQRH 408 (415)
Q Consensus 400 ~l~~~~~~~ 408 (415)
+|+++++++
T Consensus 382 ~l~~~~~~~ 390 (416)
T 3isl_A 382 GLEAVLLRH 390 (416)
T ss_dssp HHHHHHHHT
T ss_pred HHHHHHHHc
Confidence 999998764
No 116
>3ruy_A Ornithine aminotransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha and beta protein; HET: LLP; 2.65A {Bacillus anthracis} SCOP: c.67.1.0
Probab=100.00 E-value=1.7e-32 Score=259.46 Aligned_cols=327 Identities=16% Similarity=0.124 Sum_probs=239.0
Q ss_pred cCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCC-CCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHH
Q 014936 33 NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKF-NGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQ 111 (415)
Q Consensus 33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~-~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~ 111 (415)
+++.++||+.+.+....+. .+|.+.+++.+.+..... ..+.+.....++++.+++++ .++++++++|+++
T Consensus 34 ~g~~~lD~~~~~~~~~lG~-~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~--------g~~~v~~~~~gt~ 104 (392)
T 3ruy_A 34 EGNRYMDLLSAYSAVNQGH-RHPKIINALIDQANRVTLTSRAFHSDQLGPWYEKVAKLT--------NKEMVLPMNTGAE 104 (392)
T ss_dssp TCCEEEESSHHHHTCTTCB-TCHHHHHHHHHHHTTCSCCCTTSEETTHHHHHHHHHHHH--------TCSEEEEESSHHH
T ss_pred CCCEEEEcCCChhhhccCC-CCHHHHHHHHHHHHhccccccccCCHHHHHHHHHHHHhc--------CCCEEEEeCcHHH
Confidence 4778999998864322111 579999999998865322 11122345678888888887 3789999999999
Q ss_pred HHHHHHHHhcCC----------CCEEEEcCCCCcchHHHHHhCCCe-------------EEEeeccCCCCCCCChhHHHh
Q 014936 112 AIDVAMALLSRP----------GANILLPRPGFPIYELSAAFRHIE-------------VRHFDLLPDKGWEVDLDDIES 168 (415)
Q Consensus 112 al~~~~~~l~~~----------gd~vi~~~p~y~~~~~~~~~~g~~-------------~~~~~~~~~~~~~~~~~~l~~ 168 (415)
++..+++.+..+ +|+|+++.|+|+++...+...+.. +..++. .|+++|++
T Consensus 105 a~~~al~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~ 177 (392)
T 3ruy_A 105 AVETAIKTARRWAYDVKKVEANRAEIIVCEDNFHGRTMGAVSMSSNEEYKRGFGPMLPGIIVIPY-------GDLEALKA 177 (392)
T ss_dssp HHHHHHHHHHHHHHHTSCCCTTCCEEEEETTCCCCSSHHHHHTCSCTTTTTTCCSCCSSEEEECT-------TCHHHHHH
T ss_pred HHHHHHHHHHHhhhhccCCCCCCcEEEEEcCCcCCCCHhhhhccCChhhccccCCCCCCCeeeCc-------ccHHHHHH
Confidence 999999987643 679999999998877666544322 333322 27999999
Q ss_pred hcCCCceEEEecCCCCccccCCCHHH-HHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCcccc
Q 014936 169 LADQNTVALVIINPGNPCGNVYSYQH-LQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRW 247 (415)
Q Consensus 169 ~~~~~~~~v~i~~p~nptG~~~~~~~-l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~ 247 (415)
++++++++|++++|+||||.+++.++ +++|+++|++||+++|+||+|.++.+.+... .....+...+++ |+||.+
T Consensus 178 ~l~~~~~~v~~~~~~nptG~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~~g~~~-~~~~~~~~~d~~---~~SK~l 253 (392)
T 3ruy_A 178 AITPNTAAFILEPIQGEAGINIPPAGFLKEALEVCKKENVLFVADEIQTGLGRTGKVF-ACDWDNVTPDMY---ILGKAL 253 (392)
T ss_dssp HCCTTEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHTTTCEEEEECTTTTTTTTSSSS-GGGGGTCCCSEE---EECGGG
T ss_pred HhccCeEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeechhCCCccccch-hhhccCCCCCEE---EEchhh
Confidence 99988999999999999999996555 9999999999999999999998776655432 222222222333 678984
Q ss_pred CCCC-ceEEEEEeeCCCCCCChHHHHHHHHhhc-cccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhc
Q 014936 248 IVPG-WRLGWFVTTDPCGMFRKPKVVERMKKYF-DILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKE 325 (415)
Q Consensus 248 ~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 325 (415)
.+| +|+||+++++ ++++.+.... ..+++.+++.+.++.++|+.. . .++..++++++++++.+.|++
T Consensus 254 -~gG~~~~G~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~--~-~~~~~~~~~~~~~~l~~~L~~ 321 (392)
T 3ruy_A 254 -GGGVFPISCAAANR--------DILGVFEPGSHGSTFGGNPLACAVSIAALEVL--E-EEKLTERSLQLGEKLVGQLKE 321 (392)
T ss_dssp -GTTTSCCEEEEECH--------HHHTTCCTTSSCCSSTTCHHHHHHHHHHHHHH--H-HTTHHHHHHHHHHHHHHHHTT
T ss_pred -hCChhhhEEEEECH--------HHHhhhccCCcCCCCCCCHHHHHHHHHHHHHH--H-hhhHHHHHHHHHHHHHHHHHH
Confidence 346 9999999865 5666655442 235677889999998888642 1 267788999999999999998
Q ss_pred C--CCCcCCCCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEe--eCChhhHHHHHHHH
Q 014936 326 I--PCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTF--AVDPYSLEECLDRI 401 (415)
Q Consensus 326 ~--~~~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~--~~~~~~l~~~l~~l 401 (415)
+ +.+. . .+..|.++++.++. +..++...++ ++||.+.|+. .+++|+++ ..+++++++++++|
T Consensus 322 ~~~~~~~-~-~~~~g~~~~~~~~~-------~~~~l~~~l~-~~gi~v~~~~----~~~iRi~~~~~~~~~~i~~~~~~l 387 (392)
T 3ruy_A 322 IDNPMIT-E-VRGKGLFIGIELNE-------PARPYCEQLK-AAGLLCKETH----ENVIRIAPPLVISEEDLEWAFQKI 387 (392)
T ss_dssp CCCTTEE-E-EEEETTEEEEEESS-------CSHHHHHHHH-TTTEECCCBT----TTEEEECCCTTCCHHHHHHHHHHH
T ss_pred hcCCCce-E-EEeeeeEEEEEEcc-------hHHHHHHHHH-HCCcEEecCC----CCEEEEECCCCCCHHHHHHHHHHH
Confidence 7 2233 2 23345566666653 3566777664 6799999875 58999996 47899999999999
Q ss_pred HHHH
Q 014936 402 KSFY 405 (415)
Q Consensus 402 ~~~~ 405 (415)
++++
T Consensus 388 ~~~l 391 (392)
T 3ruy_A 388 KAVL 391 (392)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 8875
No 117
>3kgw_A Alanine-glyoxylate aminotransferase; AAH25799.1, putative aminotransferase, structural genomics, center for structural genomics, JCSG; HET: PLP; 1.65A {Mus musculus} SCOP: c.67.1.3 PDB: 3kgx_A 3imz_A* 3r9a_A* 1h0c_A* 1j04_A*
Probab=100.00 E-value=1.5e-32 Score=259.77 Aligned_cols=321 Identities=14% Similarity=0.075 Sum_probs=237.4
Q ss_pred CCCcHHHHHHHHHHHhcCCCCCCCC-CCCcHHHHHHHHHHHhhhCCCCCCCC-cEEEeCChHHHHHHHHHHhcCCCCEEE
Q 014936 51 FHTTHVATEAVAEALLSEKFNGYAP-TAGLPLTRRAIAEYLSRDLPYKLTPN-DVFVTSGCTQAIDVAMALLSRPGANIL 128 (415)
Q Consensus 51 ~~~~~~~~~a~~~~~~~~~~~~y~~-~~g~~~lr~~ia~~~~~~~~~~~~~~-~i~i~~g~~~al~~~~~~l~~~gd~vi 128 (415)
.++++.+++++.+.+.. ..++. .....++++.++++++ .+.+ ++++|+|+++++..++.++.++||+|+
T Consensus 32 ~~~~~~v~~a~~~~~~~---~~~~~~~~~~~~l~~~la~~~~------~~~~~~v~~~~gg~~al~~~~~~~~~~gd~vl 102 (393)
T 3kgw_A 32 SNLAPRVLAAGSLRMIG---HMQKEMLQIMEEIKQGIQYVFQ------TRNPLTLVVSGSGHCAMETALFNLLEPGDSFL 102 (393)
T ss_dssp CCCCHHHHHHTTCCCCC---TTSHHHHHHHHHHHHHHHHHHT------CCCSEEEEESCCTTTHHHHHHHHHCCTTCEEE
T ss_pred CCCCHHHHHHhcccccC---cccHHHHHHHHHHHHHHHHHhC------CCCCcEEEEeCCcHHHHHHHHHhcCCCCCEEE
Confidence 56678888877653321 11111 1234567777777763 3333 699999999999999999999999999
Q ss_pred EcCCCCcc--hHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCC-CceEEEecCCCCccccCCCHHHHHHHHHHHhhc
Q 014936 129 LPRPGFPI--YELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ-NTVALVIINPGNPCGNVYSYQHLQKLAETANKL 205 (415)
Q Consensus 129 ~~~p~y~~--~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~ 205 (415)
++.++|++ +...++..|.++..++.+. ++.+|+++|++.+++ +++++++++|+||||.+++ +++|.++|+++
T Consensus 103 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~--~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~ 177 (393)
T 3kgw_A 103 TGTNGIWGMRAAEIADRIGARVHQMIKKP--GEHYTLQEVEEGLAQHKPVLLFLVHGESSTGVVQP---LDGFGELCHRY 177 (393)
T ss_dssp EEESSHHHHHHHHHHHHTTCEEEEEECCT--TCCCCHHHHHHHHHHHCCSEEEEESEETTTTEECC---CTTHHHHHHHT
T ss_pred EEeCCchhHHHHHHHHHcCCceEEEeCCC--CCCCCHHHHHHHHhhCCCcEEEEeccCCcchhhcc---HHHHHHHHHHc
Confidence 99988863 3667788999999998754 346899999999987 8999999999999999987 67888889999
Q ss_pred CcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCcccc-CCCCceEEEEEeeCCCCCCChHHHHHHHHhhc-----
Q 014936 206 KTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRW-IVPGWRLGWFVTTDPCGMFRKPKVVERMKKYF----- 279 (415)
Q Consensus 206 ~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~-~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~----- 279 (415)
|+++|+||+|+.... ...+... ...+++.|+||++ +.+| +||+++++ ++++.+....
T Consensus 178 ~~~li~De~~~~g~~----~~~~~~~---~~d~~~~s~sK~~~~~~g--~g~~~~~~--------~~~~~~~~~~~~~~~ 240 (393)
T 3kgw_A 178 QCLLLVDSVASLGGV----PIYMDQQ---GIDIMYSSSQKVLNAPPG--ISLISFND--------KAKYKVYSRKTKPVS 240 (393)
T ss_dssp TCEEEEECTTTTTTS----CCCTTTT---TCCEEEEESSSTTCCCSS--CEEEEECH--------HHHHHHHTCSSCCSC
T ss_pred CCEEEEECCccccCc----ccchhhc---CCCEEEecCcccccCCCc--eeEEEECH--------HHHHHHhccCCCCCc
Confidence 999999999985321 1111122 2347888999975 3444 89999865 6777765421
Q ss_pred -------------------cccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCC----
Q 014936 280 -------------------DILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPE---- 336 (415)
Q Consensus 280 -------------------~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~---- 336 (415)
...++.+...+.++..+++...+..+++..++++++++++.+.|+++ ++..+ .+.
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~~~~~ 318 (393)
T 3kgw_A 241 FYTDITYLAKLWGCEGETRVIHHTTPVTSLYCLRESLALIAEQGLENCWRRHREATAHLHKHLQEM-GLKFF-VKDPEIR 318 (393)
T ss_dssp STTCHHHHHHHTTCSSSCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCBS-SSSGGGB
T ss_pred eeecHHHHHHhhhhccccCCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHc-CCeec-cCChhhc
Confidence 11235567777777667654333457888999999999999999988 77733 333
Q ss_pred CceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEe-e--CChhhHHHHHHHHHHHHHHHH
Q 014936 337 GSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTF-A--VDPYSLEECLDRIKSFYQRHA 409 (415)
Q Consensus 337 ~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~-~--~~~~~l~~~l~~l~~~~~~~~ 409 (415)
.+.++++.++.. .+..++...+++++||.+.+|..+...+++|+++ + .+++++++++++|+++++++.
T Consensus 319 ~~~~~~~~~~~~-----~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~i~~~~~~l~~~l~~~~ 389 (393)
T 3kgw_A 319 LPTITTVTVPAG-----YNWRDIVSYVLDHFSIEISGGLGPTEERVLRIGLLGYNATTENVDRVAEALREALQHCP 389 (393)
T ss_dssp CSSEEEEECCTT-----BCHHHHHHHHHHHHCEECBCCCGGGTTTEEEEECCGGGCCHHHHHHHHHHHHHHHHHSC
T ss_pred CCeEEEEeCCCC-----CCHHHHHHHHHHhCCEEEeCCcccCCCCEEEEEecccCCCHHHHHHHHHHHHHHHHhhh
Confidence 256677777531 2567777777666699999998776688999998 5 489999999999999987643
No 118
>2aeu_A Hypothetical protein MJ0158; selenocysteine synthase, PLP, pyridoxal phosphate, HOMO- oligomerization, unknown function; 1.70A {Methanocaldococcus jannaschii} SCOP: c.67.1.8 PDB: 2aev_A*
Probab=100.00 E-value=7.6e-32 Score=252.86 Aligned_cols=329 Identities=15% Similarity=0.107 Sum_probs=222.4
Q ss_pred Cc-ceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHH
Q 014936 34 EK-KVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQA 112 (415)
Q Consensus 34 ~~-~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~a 112 (415)
+. +++|++.+.+. .++++.+++++. .|..+ ..+++.++++..+.+|.. +++++++++|++++
T Consensus 26 g~~~v~~~~~~~~~----~~~~~~v~~a~~---------~~~~~---~~~~~~~~~~~a~~~g~~-~~~~~~~~~ggt~a 88 (374)
T 2aeu_A 26 GRDALYDLSGLSGG----FLIDEKDKALLN---------TYIGS---SYFAEKVNEYGLKHLGGD-ENDKCVGFNRTSSA 88 (374)
T ss_dssp CGGGCEECSSCCCC----CCCCHHHHHHHT---------STTHH---HHHHHHHHHHHHHHHTCC-TTEEEEEESSHHHH
T ss_pred CccceeeecccCCC----CCCCHHHHHHHH---------HhcCc---hHHHHHHHHHHHHHhCCC-CcceEEEEcChHHH
Confidence 55 78999988643 677898888875 12211 345556666555544532 35789999999999
Q ss_pred HHHHHHHhcCCCCEEEEcCCCCcchHH---HHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceE-EEecCCCCcccc
Q 014936 113 IDVAMALLSRPGANILLPRPGFPIYEL---SAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVA-LVIINPGNPCGN 188 (415)
Q Consensus 113 l~~~~~~l~~~gd~vi~~~p~y~~~~~---~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-v~i~~p~nptG~ 188 (415)
+..++.++ +||+|+++.|+|+++.. .++..|++++.+ .|++++++. ++++++ |++++|+||||.
T Consensus 89 ~~~~~~~~--~gd~Vl~~~~~y~~~~~~~~~~~~~g~~~~~v---------~d~~~l~~~-~~~~~~~v~~~~p~nptG~ 156 (374)
T 2aeu_A 89 ILATILAL--KPKKVIHYLPELPGHPSIERSCKIVNAKYFES---------DKVGEILNK-IDKDTLVIITGSTMDLKVI 156 (374)
T ss_dssp HHHHHHHH--CCSEEEEECSSSSCCTHHHHHHHHTTCEEEEE---------SCHHHHHTT-CCTTEEEEEECBCTTSCBC
T ss_pred HHHHHHhC--CCCEEEEecCCCCccHHHHHHHHHcCcEEEEe---------CCHHHHHhc-CCCccEEEEEccCCCCCCC
Confidence 99999988 99999999998877544 667789988876 278999988 778999 999999999996
Q ss_pred CCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCCh
Q 014936 189 VYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRK 268 (415)
Q Consensus 189 ~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~ 268 (415)
+..++++|.++|+++|+++|+||+|+.+........+....+ ..++++|+||+ ++|+|+||+++++
T Consensus 157 --~~~~l~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~---~di~~~S~sK~--l~g~~~G~~~~~~------- 222 (374)
T 2aeu_A 157 --ELENFKKVINTAKNKEAIVFVDDASGARVRLLFNQPPALKLG---ADLVVTSTDKL--MEGPRGGLLAGKK------- 222 (374)
T ss_dssp --CHHHHHHHHHHHHHHTCCEEEECTTHHHHHHHTTCCCHHHHT---CSEEEEETTSS--SSSCSCEEEEEEH-------
T ss_pred --CcccHHHHHHHHHHcCCEEEEECCcccccccccccCCccccC---CcEEEecCccc--ccCcceEEEEECH-------
Confidence 669999999999999999999999987641000000011122 23888999998 4578999999865
Q ss_pred HHHHHHHHhhcc-ccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHH----HHHHHHHhhcC---CCCcCCCCCCCceE
Q 014936 269 PKVVERMKKYFD-ILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQS----VDICYNKIKEI---PCISCPHKPEGSMA 340 (415)
Q Consensus 269 ~~~~~~~~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~----~~~l~~~l~~~---~~~~~~~~p~~g~~ 340 (415)
++++.++.... ...+++++.+.++..+|+....+.+++..+..+.. ++.+.+.|..+ +++.+...|.+.++
T Consensus 223 -~~~~~l~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~~~~~~~g~~~ 301 (374)
T 2aeu_A 223 -ELVDKIYIEGTKFGLEAQPPLLAGIYRALKNFNLERIRKAFERAKNFDLSKIEKLNKELKAIDDNINIVYERTPTGFVI 301 (374)
T ss_dssp -HHHHHHHHHHHTTTCBCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHTTTCTTEEEEEEECSSEEEE
T ss_pred -HHHHHHHHhhccccCCCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccCcceeeCCceEEE
Confidence 67787776543 23456788888888888754322333333333333 45566666554 24442224555555
Q ss_pred EEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCC-CCCeEEEEeeC-C--hhhHHHHHHHHHHHHHHH
Q 014936 341 VMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVG-LKNWLRVTFAV-D--PYSLEECLDRIKSFYQRH 408 (415)
Q Consensus 341 ~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~-~~~~iRi~~~~-~--~~~l~~~l~~l~~~~~~~ 408 (415)
.|..++... +..++.+++..+++++||.+.||..|. ..+++||+++. + +++++.+++.|+++++++
T Consensus 302 ~~~~~~~~~--~~~~~~~~~~~ll~~~gV~v~~g~~~~~~~~~lRi~~~~~~~~~~~l~~l~~~l~~~l~~~ 371 (374)
T 2aeu_A 302 KRVYKDDTI--NIKKLIEIGFNLLKNYGIITITVAGMPGASKSLRIDLTSRDAERIDDNYIIKAIVESIKMA 371 (374)
T ss_dssp EEEESSHHH--HHHHHHHHHHHHHHHHCEECSTTSSSCSSCCSEEEETTSGGGGGSCHHHHHHHHHHHHHHH
T ss_pred Eeecccccc--cccchHHHHHHHHHhCCEEEecCCCCCCCCCeEEEEcCCchHHHHHHHHHHHHHHHHHHHH
Confidence 554443100 000122366677788899999998763 35799999953 2 234666666666665543
No 119
>3i4j_A Aminotransferase, class III; structural GENOMICS,NYSGXRC, target 11246C, deino radiodurans, pyridoxal phosphate, transfe PSI-2; 1.70A {Deinococcus radiodurans}
Probab=100.00 E-value=2.9e-32 Score=260.98 Aligned_cols=352 Identities=14% Similarity=0.064 Sum_probs=223.9
Q ss_pred cCcceeEecccCCCCCCCCC-CcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHH
Q 014936 33 NEKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQ 111 (415)
Q Consensus 33 ~~~~~i~l~~g~~~~~~~~~-~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~ 111 (415)
+++.++||+.+.+... ++ .+|.+++++.+.+.... .|....+..+.++++++++.+..+ .+.++|++++|+++
T Consensus 27 ~g~~~lD~~~~~~~~~--lG~~~p~v~~a~~~~~~~~~--~~~~~~~~~~~~~~l~~~la~~~~--~~~~~v~~~~gg~e 100 (430)
T 3i4j_A 27 AGRRYLDGSSGALVAN--IGHGRAEVGERMAAQAARLP--FVHGSQFSSDVLEEYAGRLARFVG--LPTFRFWAVSGGSE 100 (430)
T ss_dssp TSCEEEETTHHHHTCT--TCBCCHHHHHHHHHHHHHCC--CCCTTTCEEHHHHHHHHHHHHHTT--CTTCEEEEESSHHH
T ss_pred CCCEEEECCCchhccc--cCCCCHHHHHHHHHHHHhcc--cccccccCCHHHHHHHHHHHHhCC--CCCCEEEEeCcHHH
Confidence 4778999998743222 33 38999999999887532 333334455666677777666554 56779999999999
Q ss_pred HHHHHHHHhc--------CCCCEEEEcCCCCcchHHHHHhCCC---------------eEEEeeccCCCC---CCCChhH
Q 014936 112 AIDVAMALLS--------RPGANILLPRPGFPIYELSAAFRHI---------------EVRHFDLLPDKG---WEVDLDD 165 (415)
Q Consensus 112 al~~~~~~l~--------~~gd~vi~~~p~y~~~~~~~~~~g~---------------~~~~~~~~~~~~---~~~~~~~ 165 (415)
++..+++++. .+++.|++.+|+|+++...+...+. ++..++.+ +. ...|+++
T Consensus 101 a~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 178 (430)
T 3i4j_A 101 ATESAVKLARQYHVERGEPGRFKVITRVPSYHGASLGSLAASGMGARRELYTPLMRPEAWPKLPKP--DPARNGAEDAEG 178 (430)
T ss_dssp HHHHHHHHHHHHHHHTTCTTCCEEEEETTC-------------------------CGGGSCEECCC--CTTSCHHHHHTH
T ss_pred HHHHHHHHHHHHHHhcCCCCCcEEEEEeCCcCCCCcccccccCccccccccCCcCCCCCceEcCCC--cccchhhHHHHH
Confidence 9999999886 3478999999999987765544433 22222221 11 1125688
Q ss_pred HHhhcCC---CceEEEecCC-CC-cccc-CCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCccccccc-CCCCCeE
Q 014936 166 IESLADQ---NTVALVIINP-GN-PCGN-VYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVF-GSTVPIL 238 (415)
Q Consensus 166 l~~~~~~---~~~~v~i~~p-~n-ptG~-~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~-~~~~~~i 238 (415)
|++.++. .+.++++++| +| ++|. .++.+++++|.++|++||+++|+||+|.++.+.+.. ..+..+ +...++
T Consensus 179 le~~l~~~~~~~~~~vi~~p~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~~~~~~g~~-~~~~~~~~~~~di- 256 (430)
T 3i4j_A 179 LRALLEREGPETVAAFMAEPVVGASDAALAPAPGYYERVRDICDEAGIIFIADEVMSGMGRCGSP-LALSRWSGVTPDI- 256 (430)
T ss_dssp HHHHHHHHCGGGEEEEEECSSCCGGGTTCCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSS-SGGGGTTTCCCSE-
T ss_pred HHHHHHhcCCCCEEEEEEcCcccCcCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcccch-hhhhhhcCCCCcE-
Confidence 8887762 4556666777 56 7886 578888999999999999999999999987765542 222233 222223
Q ss_pred EEccCccccCCCC-ceEEEEEeeCCCCCCChHHHHHHHHhh-----ccccCCchhHHHHHHHHhhCCCc-HHHHHHHHHH
Q 014936 239 TLGSLSKRWIVPG-WRLGWFVTTDPCGMFRKPKVVERMKKY-----FDILGDPATFIQAAVPSILQQPD-EVFFKKTLNL 311 (415)
Q Consensus 239 ~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~a~~~~l~~~~-~~~~~~~~~~ 311 (415)
.+|||+++. | +|+||+++++ ++++.+... ...+++.+++++.++.++|+... ++..++.++.
T Consensus 257 --~t~sK~l~~-G~~r~G~~~~~~--------~i~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~ 325 (430)
T 3i4j_A 257 --AVLGKGLAA-GYAPLAGLLAAP--------QVYETVMGGSGAFMHGFTYAGHPVSVAAGLSVLDIVEREDLTGAAKER 325 (430)
T ss_dssp --EEECGGGTT-TSSCCEEEEECH--------HHHHHHHHTTCBCCCCCTTTTCHHHHHHHHHHHHHHHHTTHHHHHHHH
T ss_pred --EEEcccccC-CccccEEEEECH--------HHHHHHhccCCcccccCCCCCCHHHHHHHHHHHHHHHcccHHHHHHHH
Confidence 368999874 9 9999999865 788888752 23456789999999888886421 1334444444
Q ss_pred HHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCccccCC----CCCHHHHHHHHHhhcCeEEEcCCCCC---CCCeEE
Q 014936 312 LKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLDD----IIDDIDFCFKLAKEESVIILPGTAVG---LKNWLR 384 (415)
Q Consensus 312 ~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~~~----~~~~~~~~~~ll~~~gi~v~~g~~~~---~~~~iR 384 (415)
.+..++.+.+.+.++|++. . .+..|.|+++.+....... .....++...++ ++||.+.|+..+. ..+++|
T Consensus 326 ~~~~~~~l~~~~~~~~~~~-~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~~~~~~~~~~~~iR 402 (430)
T 3i4j_A 326 GAQLLAGLQALQARFPQMM-Q-VRGTGLLLGVVLGDLATGQAFETPGIASRIGAAAL-KRGLITYPGSGAEPNGRGDHLL 402 (430)
T ss_dssp HHHHHHHHHHHHHHCTTEE-E-EEEETTEEEEEEC------------CHHHHHHHHH-HTTEECC-----------CEEE
T ss_pred HHHHHHHHHHHHHhCCCeE-E-EEEEEEEEEEEeccccccCCCccHHHHHHHHHHHH-hCCCEEEecccccCCCCCCEEE
Confidence 4444555555544566555 3 3445778887774211000 011245666654 6799999874322 157899
Q ss_pred EEee--CChhhHHHHHHHHHHHHHHH
Q 014936 385 VTFA--VDPYSLEECLDRIKSFYQRH 408 (415)
Q Consensus 385 i~~~--~~~~~l~~~l~~l~~~~~~~ 408 (415)
|+++ .+++++++++++|+++++++
T Consensus 403 i~~~~~~t~e~i~~~l~~l~~~l~~~ 428 (430)
T 3i4j_A 403 LGPPLSITAAEVDGLLALLAGALEDV 428 (430)
T ss_dssp ECCCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred EECCCCCCHHHHHHHHHHHHHHHHHh
Confidence 9996 68999999999999998764
No 120
>2eo5_A 419AA long hypothetical aminotransferase; PLP enzyme, structural genomics, NPPSFA, N project on protein structural and functional analyses; HET: PLP; 1.90A {Sulfolobus tokodaii}
Probab=100.00 E-value=8.5e-32 Score=256.74 Aligned_cols=339 Identities=16% Similarity=0.141 Sum_probs=228.8
Q ss_pred cCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHH
Q 014936 33 NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQA 112 (415)
Q Consensus 33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~a 112 (415)
+++.++|++.+.+....+++.+|.+++++.+.+..... |++..+..+++..+++.+.+..|... +++|++|+|++++
T Consensus 40 ~g~~~lD~~~~~~~~~lG~~~~p~v~~a~~~~~~~~~~--~~~~~~~~~~~~~l~~~la~~~~~~~-~~~v~~~~gg~ea 116 (419)
T 2eo5_A 40 DGNKYLDFTSGIGVNNLGWPSHPEVIKIGIEQMQKLAH--AAANDFYNIPQLELAKKLVTYSPGNF-QKKVFFSNSGTEA 116 (419)
T ss_dssp TSCEEEESSGGGGTTTTCBSCCHHHHHHHHHHHTTSCC--CSCSCSCCHHHHHHHHHHHHHSSCSS-CEEEEEESSHHHH
T ss_pred CCCEEEEccCChhhhccCCCCCHHHHHHHHHHHhhCcc--ccccccCCHHHHHHHHHHHHhCCCCc-CCEEEEeCchHHH
Confidence 46778999888743221122279999999999875321 22111222344444444444444322 7899999999999
Q ss_pred HHHHHHHhcC-CCCEEEEcCCCCcchHHHHH-hCC-------------CeEEEeeccCCC--CCC------------CCh
Q 014936 113 IDVAMALLSR-PGANILLPRPGFPIYELSAA-FRH-------------IEVRHFDLLPDK--GWE------------VDL 163 (415)
Q Consensus 113 l~~~~~~l~~-~gd~vi~~~p~y~~~~~~~~-~~g-------------~~~~~~~~~~~~--~~~------------~~~ 163 (415)
+..+++++.. +||+|++.+|+|+++...+. ..| .++..++.+... .|+ +|+
T Consensus 117 ~~~ai~~~~~~~~~~vi~~~p~yh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~g~~~~~~~~~~~~~~~ 196 (419)
T 2eo5_A 117 IEASIKVVKNTGRKYIIAFLGGFHGRTFGSISLTASKAVQRSIVGPFMPGVIHVPYPNPYRNPWHINGYENPSELVNRVI 196 (419)
T ss_dssp HHHHHHHHHTTSCCEEEEETTCCCCSSHHHHHHCCSCGGGGCSSCCCCTTEEEECCCCSSSCTTCCCTTTCHHHHHHHHH
T ss_pred HHHHHHHHHHhhCCcEEEECCCcCCCCHhhHhhcCCccccccccCCCCCCCEEECCCccccccccccccccchhhHHHHH
Confidence 9999987653 48999999999987554332 211 245666653210 011 367
Q ss_pred hHHH-hhcCC----CceEEEecCCC-Ccccc-CCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCC
Q 014936 164 DDIE-SLADQ----NTVALVIINPG-NPCGN-VYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVP 236 (415)
Q Consensus 164 ~~l~-~~~~~----~~~~v~i~~p~-nptG~-~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~ 236 (415)
++|+ +++++ ....+++++|+ ||||. +.+.+++++|+++|++||+++|+||+|.++.+.+.. ..+...+...+
T Consensus 197 ~~l~~~~i~~~~~~~~~~~vi~~p~~~~tG~~~~~~~~l~~l~~l~~~~~~~li~DE~~~~~g~~g~~-~~~~~~~~~~d 275 (419)
T 2eo5_A 197 EFIEDYIFVNLVPPEEVAGIFFEPIQGEGGYVIPPKNFFAELQKLAKKYGILLVDDEVQMGLGRTGKL-FAIENFNTVPD 275 (419)
T ss_dssp HHHHHTHHHHTCCGGGEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSS-SGGGGGTCCCS
T ss_pred HHHHHHHHhhccCCCCEEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCccCcch-hhHHhcCCCCC
Confidence 8898 88763 23456777885 57896 678899999999999999999999999987655432 12222222233
Q ss_pred eEEEccCccccCCCC-ceEEEEEeeCCCCCCChHHHHHHHHhhccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHH
Q 014936 237 ILTLGSLSKRWIVPG-WRLGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQS 315 (415)
Q Consensus 237 ~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~ 315 (415)
++ ||||.|+. | +|+||+++++ +++ .+......+++.+++++.++.++|+. +++..++++++
T Consensus 276 ~~---t~sK~~~~-G~~riG~~~~~~--------~~~-~~~~~~~~t~~~n~~~~~aa~aal~~-----~~~~~~~~~~~ 337 (419)
T 2eo5_A 276 VI---TLAKALGG-GIMPIGATIFRK--------DLD-FKPGMHSNTFGGNALACAIGSKVIDI-----VKDLLPHVNEI 337 (419)
T ss_dssp EE---EECGGGGT-TTSCCEEEEEEG--------GGC-CC------CCCCCHHHHHHHHHHHHH-----HHHHHHHHHHH
T ss_pred EE---EecccccC-CccceEEEEEch--------Hhh-cCCcccCCCCCCCHHHHHHHHHHHHH-----HHHHHHHHHHH
Confidence 33 79999874 9 9999999976 233 33112223567789999999999863 33377889999
Q ss_pred HHHHHHHhhcCCCCcCCCCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEe--eCChhh
Q 014936 316 VDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTF--AVDPYS 393 (415)
Q Consensus 316 ~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~--~~~~~~ 393 (415)
++++.+.|+++ +. . .+..|+|+|+++.... .... +...++ ++||.+.|+. .+++||++ ..++++
T Consensus 338 ~~~l~~~L~~~--~~-~-~~~~g~~~~i~~~~~~----~~~~-~~~~l~-~~Gv~v~~~~----~~~lRis~~~~~t~e~ 403 (419)
T 2eo5_A 338 GKIFAEELQGL--AD-D-VRGIGLAWGLEYNEKK----VRDR-IIGESF-KRGLLLLPAG----RSAIRVIPPLVISEEE 403 (419)
T ss_dssp HHHHHHHHTTS--SS-E-EEEETTEEEEECSCHH----HHHH-HHHHHH-HTTEECEEET----TTEEEECCCTTCCHHH
T ss_pred HHHHHHHHHHh--hh-h-eEeeeEEEEEEEecCc----cHHH-HHHHHH-HCCCEEecCC----CCEEEEECCCCCCHHH
Confidence 99999999876 33 2 3445778888883110 0133 666654 6799999874 57999987 468999
Q ss_pred HHHHHHHHHHHHHH
Q 014936 394 LEECLDRIKSFYQR 407 (415)
Q Consensus 394 l~~~l~~l~~~~~~ 407 (415)
+++++++|++++++
T Consensus 404 i~~~l~~l~~~l~~ 417 (419)
T 2eo5_A 404 AKQGLDILKKVIKV 417 (419)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh
Confidence 99999999988764
No 121
>1jg8_A L-ALLO-threonine aldolase; glycine biosynthesis, pyridoxal-5'- phosphate, calcium binding site, structural genomics, PSI; HET: LLP; 1.80A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1lw4_A* 1lw5_A* 1m6s_A* 2fm1_A*
Probab=100.00 E-value=1.4e-32 Score=255.75 Aligned_cols=326 Identities=18% Similarity=0.158 Sum_probs=225.0
Q ss_pred CcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHH
Q 014936 34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAI 113 (415)
Q Consensus 34 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al 113 (415)
+..+|+|+.+.+. .+++.+++++.+.... . ..|.+..+..+||+++|++++ .+++++++|+++++
T Consensus 2 ~~~~i~~~~~~~~-----~p~~~~~~a~~~~~~~-~-~~y~~~~~~~~l~~~la~~~g--------~~~~~~~~~gt~a~ 66 (347)
T 1jg8_A 2 PHMMIDLRSDTVT-----KPTEEMRKAMAQAEVG-D-DVYGEDPTINELERLAAETFG--------KEAALFVPSGTMGN 66 (347)
T ss_dssp ---CEECSCGGGC-----CCCHHHHHHHHTCCCC-C-GGGTCCHHHHHHHHHHHHHHT--------CSEEEEESCHHHHH
T ss_pred CceEEEeccccCC-----CCCHHHHHHHhcCCCC-C-cccCCChHHHHHHHHHHHHhC--------CceEEEecCcHHHH
Confidence 3457899999743 3568888888655322 1 256666788999999999983 35788889999999
Q ss_pred HHHHHHhcCCCCEEEEcCCCCcchH---HHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCC------CceEEEecCCCC
Q 014936 114 DVAMALLSRPGANILLPRPGFPIYE---LSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ------NTVALVIINPGN 184 (415)
Q Consensus 114 ~~~~~~l~~~gd~vi~~~p~y~~~~---~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~------~~~~v~i~~p~n 184 (415)
.+++.++.++||+|+++.|+|.... ..+...|++++.+ .+ .++.+|++++++++++ ++++|++++|+|
T Consensus 67 ~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v-~~--~~~~~d~~~l~~~i~~~~~~~~~~~~v~~~~~~n 143 (347)
T 1jg8_A 67 QVSIMAHTQRGDEVILEADSHIFWYEVGAMAVLSGVMPHPV-PG--KNGAMDPDDVRKAIRPRNIHFPRTSLIAIENTHN 143 (347)
T ss_dssp HHHHHHHCCTTCEEEEETTCHHHHSSTTHHHHHTCCEEEEE-CE--ETTEECHHHHHHHSCCSCTTSCCEEEEEEESSBT
T ss_pred HHHHHHhcCCCCEEEEcCcchhhhccccchhhccCeEEEEe-cC--CCCccCHHHHHHHhccccccccCceEEEEecccc
Confidence 9999999999999999999997543 2567789998887 33 2345799999999875 588999999999
Q ss_pred cc-ccCCCHHHHHHHHHHHhhcCcEEEEccccCCcc--cCCCCcccccccCCCCCeEEEccCccccCCCCceEEE-EEee
Q 014936 185 PC-GNVYSYQHLQKLAETANKLKTLVIADEVYGHLV--FGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGW-FVTT 260 (415)
Q Consensus 185 pt-G~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~--~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~-~~~~ 260 (415)
|| |.++|.+++++|+++|+++|+++|+|++|..+. +.+.....+.. . .+ .++.|+||+++++ +|| ++.+
T Consensus 144 pt~G~~~~~~~l~~i~~~a~~~~~~li~D~a~~~~~~~~~~~~~~~~~~-~-~d--~~~~s~sK~l~~~---~G~~~~~~ 216 (347)
T 1jg8_A 144 RSGGRVVPLENIKEICTIAKEHGINVHIDGARIFNASIASGVPVKEYAG-Y-AD--SVMFCLSKGLCAP---VGSVVVGD 216 (347)
T ss_dssp TTTSBCCCHHHHHHHHHHHHHHTCEEEEEETTHHHHHHHHCCCHHHHHH-T-CS--EEEEESSSTTCCS---SCEEEEEC
T ss_pred ccCCccCcHHHHHHHHHHHHHCCCEEEeehhhhhcchhhcCCChHHhcc-c-cc--EEEEecccccCCC---ceEEEEcC
Confidence 99 999999999999999999999999999975421 11221111111 1 12 3345899997643 575 4443
Q ss_pred CCCCCCChHHHHHHHHhhcc-cc--CCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCC
Q 014936 261 DPCGMFRKPKVVERMKKYFD-IL--GDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEG 337 (415)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~ 337 (415)
+ ++++.+..... .. ...+...+.++...|+... +.+ ++..++++.+.+.|+++ ++.+...|..
T Consensus 217 ~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~----~~~~~~~~~l~~~L~~~-~~~~~~~~~~ 282 (347)
T 1jg8_A 217 R--------DFIERARKARKMLGGGMRQAGVLAAAGIIALTKMV-DRL----KEDHENARFLALKLKEI-GYSVNPEDVK 282 (347)
T ss_dssp H--------HHHHHHHHHHHHHTCCCSSTHHHHHHHHHHHHHSS-TTH----HHHHHHHHHHHHHHHHH-TCBCCGGGCC
T ss_pred H--------HHHHHHHHHHHHcCCchhHHHHHHHHHHHHHHHHH-HHH----HHHHHHHHHHHHHHHhc-CceeccCCCc
Confidence 2 56666554322 11 1223344444444454221 112 22334667777888776 6652223556
Q ss_pred ceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEee--CChhhHHHHHHHHHHHHHH
Q 014936 338 SMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFA--VDPYSLEECLDRIKSFYQR 407 (415)
Q Consensus 338 g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~--~~~~~l~~~l~~l~~~~~~ 407 (415)
++++|++++.. + .+..++...++ ++||.+.++. .+++|+++. .+++++++++++|++++++
T Consensus 283 ~~~~~~~~~~~---~-~~~~~~~~~l~-~~gi~v~~~~----~~~iRl~~~~~~~~e~i~~~~~~l~~~l~~ 345 (347)
T 1jg8_A 283 TNMVILRTDNL---K-VNAHGFIEALR-NSGVLANAVS----DTEIRLVTHKDVSRNDIEEALNIFEKLFRK 345 (347)
T ss_dssp SSEEEEECTTS---S-SCHHHHHHHHH-HHTEECEEEE----TTEEEEECCTTSCHHHHHHHHHHHHHHHHH
T ss_pred ceEEEEEcccc---c-CCHHHHHHHHH-HCCCEEecCC----CCeEEEEeCCCCCHHHHHHHHHHHHHHHHh
Confidence 77899888631 1 24667777775 6799998753 478999984 5899999999999988764
No 122
>1m32_A 2-aminoethylphosphonate-pyruvate aminotransferase; PLP-dependent aminotransferase fold; HET: PLP; 2.20A {Salmonella typhimurium} SCOP: c.67.1.3
Probab=100.00 E-value=2.9e-32 Score=255.28 Aligned_cols=329 Identities=11% Similarity=0.097 Sum_probs=239.0
Q ss_pred ceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCC-C-CCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHH
Q 014936 36 KVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAP-T-AGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAI 113 (415)
Q Consensus 36 ~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~-~-~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al 113 (415)
++++|+.| | .++++.+++++.+.+. +.|+. . .+..++|+.++++++ ...+++++++|+|+++++
T Consensus 4 ~~~~~~~g-p-----~~~~~~v~~a~~~~~~----~~~~~~~~~~~~~l~~~la~~~g----~~~~~~~v~~~~g~t~a~ 69 (366)
T 1m32_A 4 NYLLLTPG-P-----LTTSRTVKEAMLFDSC----TWDDDYNIGVVEQIRQQLTALAT----ASEGYTSVLLQGSGSYAV 69 (366)
T ss_dssp -CEECSSS-S-----CCCCHHHHHTTCCCCC----TTSHHHHTTTHHHHHHHHHHHHC----SSSSEEEEEEESCHHHHH
T ss_pred ccccccCC-C-----cCCCHHHHHHHhhhhc----CCCHHHHHHHHHHHHHHHHHHhC----CCCcCcEEEEecChHHHH
Confidence 36888888 3 3467888888876431 22321 1 678999999999983 112235899999999999
Q ss_pred HHHHHHhcCCCCEEEEcC-CCCcc-hHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCC--CceEEEecCCCCccccC
Q 014936 114 DVAMALLSRPGANILLPR-PGFPI-YELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ--NTVALVIINPGNPCGNV 189 (415)
Q Consensus 114 ~~~~~~l~~~gd~vi~~~-p~y~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~~v~i~~p~nptG~~ 189 (415)
..++.++.++||+|++.+ ++|+. +...+...|.++..++.+. ++.+|+++|++++++ +++++++++|+||||.+
T Consensus 70 ~~~~~~~~~~gd~vi~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~l~~~~~~~~v~~~~~~nptG~~ 147 (366)
T 1m32_A 70 EAVLGSALGPQDKVLIVSNGAYGARMVEMAGLMGIAHHAYDCGE--VARPDVQAIDAILNADPTISHIAMVHSETTTGML 147 (366)
T ss_dssp HHHHHHSCCTTCCEEEEESSHHHHHHHHHHHHHTCCEEEEECCT--TSCCCHHHHHHHHHHCTTCCEEEEESEETTTTEE
T ss_pred HHHHHHhcCCCCeEEEEeCCCccHHHHHHHHHhCCceEEEeCCC--CCCCCHHHHHHHHhcCCCeEEEEEecccCCccee
Confidence 999999999999988776 55554 5567788899999998753 456899999998865 47889999999999999
Q ss_pred CCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChH
Q 014936 190 YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKP 269 (415)
Q Consensus 190 ~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~ 269 (415)
++ +++|+++|+++|+++|+||+|+.+.. ...+... +..+++.|+||+++. +.++||+++++
T Consensus 148 ~~---l~~i~~l~~~~~~~li~Dea~~~~~~----~~~~~~~---~~di~~~s~~K~~~~-~~g~G~~~~~~-------- 208 (366)
T 1m32_A 148 NP---IDEVGALAHRYGKTYIVDAMSSFGGI----PMDIAAL---HIDYLISSANKCIQG-VPGFAFVIARE-------- 208 (366)
T ss_dssp CC---HHHHHHHHHHHTCEEEEECTTTTTTS----CCCTTTT---TCSEEEEESSSTTCC-CSSEEEEEEEH--------
T ss_pred cC---HHHHHHHHHHcCCEEEEECCccccCc----Ccccccc---CccEEEecCcccccC-CCceEEEEECH--------
Confidence 88 67888999999999999999986432 1122222 234889999997532 23479999975
Q ss_pred HHHHHHHhh-------------------ccccCCchhHHHHHHHHhhCCCcHHH-HHHHHHHHHHHHHHHHHHhhcCCCC
Q 014936 270 KVVERMKKY-------------------FDILGDPATFIQAAVPSILQQPDEVF-FKKTLNLLKQSVDICYNKIKEIPCI 329 (415)
Q Consensus 270 ~~~~~~~~~-------------------~~~~~~~~~~~~~a~~~~l~~~~~~~-~~~~~~~~~~~~~~l~~~l~~~~~~ 329 (415)
++++.+... ....++.+...+.++.++++...+.. +++.+++++++++++.+.|+++ ++
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~l~~~L~~~-~~ 287 (366)
T 1m32_A 209 QKLAACKGHSRSLSLDLYAQWRCMEDNHGKWRFTSPTHTVLAFAQALKELAKEGGVAARHQRYQQNQRSLVAGMRAL-GF 287 (366)
T ss_dssp HHHTTCTTCCSCSTTCHHHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHT-TC
T ss_pred HHHHhhcCCCCCccccHHHHHhhhcccCCCCCCCCCHHHHHHHHHHHHHHHHccCHhHHHHHHHHHHHHHHHHHHHC-CC
Confidence 444433221 00024567777777777775422121 6778899999999999999988 77
Q ss_pred cCCCCC---CCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEee--CChhhHHHHHHHHHHH
Q 014936 330 SCPHKP---EGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFA--VDPYSLEECLDRIKSF 404 (415)
Q Consensus 330 ~~~~~p---~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~--~~~~~l~~~l~~l~~~ 404 (415)
.++ .| ..++++|+.++.. .+ .+..++...++ ++||.+.+|..|. .+++|++++ .+++++++++++|+++
T Consensus 288 ~~~-~~~~~~~~~~~~~~~~~~--~~-~~~~~~~~~l~-~~gi~v~~~~~~~-~~~iRi~~~~~~~~~~i~~~~~~l~~~ 361 (366)
T 1m32_A 288 NTL-LDDELHSPIITAFYSPED--PQ-YRFSEFYRRLK-EQGFVIYPGKVSQ-SDCFRIGNIGEVYAADITALLTAIRTA 361 (366)
T ss_dssp CBS-SCGGGBCSSEEEEECCCC--TT-CCHHHHHHHHH-HTTEECEECCCSS-SCEEEEECCSSCCHHHHHHHHHHHHHH
T ss_pred eec-cCchhcCceEEEEEcCcc--CC-CCHHHHHHHHH-HCCEEEECCcCCC-CCEEEEecCCCCCHHHHHHHHHHHHHH
Confidence 733 43 3567889888631 01 24667777665 5599999998773 689999996 4789999999999887
Q ss_pred HH
Q 014936 405 YQ 406 (415)
Q Consensus 405 ~~ 406 (415)
++
T Consensus 362 ~~ 363 (366)
T 1m32_A 362 MY 363 (366)
T ss_dssp CT
T ss_pred HH
Confidence 64
No 123
>3f0h_A Aminotransferase; RER070207000802, structural genomics, JOIN for structural genomics, JCSG; HET: MSE LLP; 1.70A {Eubacterium rectale}
Probab=100.00 E-value=1.2e-31 Score=252.27 Aligned_cols=331 Identities=15% Similarity=0.114 Sum_probs=229.4
Q ss_pred ceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHH
Q 014936 36 KVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDV 115 (415)
Q Consensus 36 ~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~ 115 (415)
..++|..|. .++++.+++++.+.+.. .+.+ +..++.+.+.+++.+.+|.+.+.+.+++++|+++++.+
T Consensus 19 ~~~~~~pgp------~~~~~~v~~a~~~~~~~----~~~~--~~~~~~~~~~~~la~~~g~~~~~~~i~~~~ggt~al~~ 86 (376)
T 3f0h_A 19 GMLNFTVGP------VMSSEEVRAIGAEQVPY----FRTT--EFSSTMLENEKFMLEYAKAPEGSKAVFMTCSSTGSMEA 86 (376)
T ss_dssp SCEECSSSS------CCCCHHHHHHHTSCCCC----CSSH--HHHHHHHHHHHHHHHHHTCCTTCEEEEESSCHHHHHHH
T ss_pred CceeecCCC------CCCcHHHHHHhcCCCCC----CCCH--HHHHHHHHHHHHHHHHhCCCCCceEEEEcCChhHHHHH
Confidence 446666663 56788888888665431 1211 22345555555555444433223455669999999999
Q ss_pred HHHHhcCCCCEEEEcCCCCcchH--HHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHH
Q 014936 116 AMALLSRPGANILLPRPGFPIYE--LSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQ 193 (415)
Q Consensus 116 ~~~~l~~~gd~vi~~~p~y~~~~--~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~ 193 (415)
++.++.++||+|+++.|+|++.. ..+...|.++..++.+ .++.+|++++++.++++++++++++|+||||.++|
T Consensus 87 ~~~~~~~~gd~vi~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~~~~~~~~v~~~~~~nptG~~~~-- 162 (376)
T 3f0h_A 87 VVMNCFTKKDKVLVIDGGSFGHRFVQLCEIHEIPYVALKLE--HGKKLTKEKLYEYDNQNFTGLLVNVDETSTAVLYD-- 162 (376)
T ss_dssp HHHHHCCTTCCEEEEESSHHHHHHHHHHHHTTCCEEEEECC--TTCCCCHHHHHTTTTSCCCEEEEESEETTTTEECC--
T ss_pred HHHhccCCCCeEEEEeCChhhHHHHHHHHHcCCceEEEeCC--CCCCCCHHHHHHhhccCceEEEEecccCCcceecC--
Confidence 99999999999999999877644 3467789999988875 34678999999998888999999999999999988
Q ss_pred HHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccC-CCCceEEEEEeeCCCCCCChHHHH
Q 014936 194 HLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWI-VPGWRLGWFVTTDPCGMFRKPKVV 272 (415)
Q Consensus 194 ~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~-~~G~r~G~~~~~~~~~~~~~~~~~ 272 (415)
+++|+++|+++|+++|+|++++.+... ..+...+. .+++.|+||+++ .+| +|++++++ +++
T Consensus 163 -l~~i~~l~~~~~~~li~D~~~~~~~~~----~~~~~~~~---d~~~~s~~K~l~~~~G--~g~~~~~~--------~~~ 224 (376)
T 3f0h_A 163 -TMMIGEFCKKNNMFFVCDCVSAFLADP----FNMNECGA---DVMITGSQKVLACPPG--ISVIVLAP--------RGV 224 (376)
T ss_dssp -HHHHHHHHHHTTCEEEEECTTTTTTSC----CCHHHHTC---SEEEEETTTTTCCCSS--CEEEEECH--------HHH
T ss_pred -HHHHHHHHHHcCCEEEEEcCccccCcc----ccccccCc---cEEEecCcccccCCCc--eEEEEECH--------HHH
Confidence 888999999999999999999874422 12222222 388889999987 566 67777754 566
Q ss_pred HHHHhhcc------------------ccCCchhHHHHHHHHhhCCCcHH-HHHHHHHHHHHHHHHHHHHhhcCCCCcCCC
Q 014936 273 ERMKKYFD------------------ILGDPATFIQAAVPSILQQPDEV-FFKKTLNLLKQSVDICYNKIKEIPCISCPH 333 (415)
Q Consensus 273 ~~~~~~~~------------------~~~~~~~~~~~a~~~~l~~~~~~-~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~ 333 (415)
+.+..... ...+++...+.++.++++...+. .+++..++++++++++.+.|+++ ++...
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-~~~~~- 302 (376)
T 3f0h_A 225 ERVEKSKVRTMYFDLKDALKNQERGQTPFTPAVGILLQINERLKEIKKHGGADAEVARIASQAADFRAKIKDL-PFELV- 302 (376)
T ss_dssp HHHHTCCCCCSTTCHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHTTTS-SEEEC-
T ss_pred HHhhcCCCCceeecHHHHHhhcccCCCCCCCcHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHc-CCccC-
Confidence 66653210 12234443334444444322222 57888899999999999999987 55522
Q ss_pred CCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEee--CChhhHHHHHHHHHHHHHH
Q 014936 334 KPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFA--VDPYSLEECLDRIKSFYQR 407 (415)
Q Consensus 334 ~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~--~~~~~l~~~l~~l~~~~~~ 407 (415)
.+.....++...+. + .+..++...+++++||.+.+|......+++|+++. .+++++++++++|++++++
T Consensus 303 ~~~~~~~~~~~~~~----~-~~~~~l~~~l~~~~gi~v~~g~~~~~~~~lRis~~~~~t~e~i~~~~~~l~~~l~~ 373 (376)
T 3f0h_A 303 SESPANGVTSVHPT----T-ANAYDIFLKLKDEYGIWICPNGGEMKDTIFRVGHIGALTHEDNTTLVNAFKDLQKR 373 (376)
T ss_dssp CSSBBTTEEEEEES----S-SCHHHHHHHHHHHSSEECEECCGGGTTTCEEEECCSSCCHHHHHHHHHHHHHHHHT
T ss_pred ccccCceEEEEeCC----C-CCHHHHHHHHHHhCCEEEecCccccCCCEEEEecCCCCCHHHHHHHHHHHHHHHHh
Confidence 33222222221221 1 25677777776656999999854445689999994 6899999999999988753
No 124
>2pb2_A Acetylornithine/succinyldiaminopimelate aminotran; ARGD, pyridoxal 5'-phosphate, arginine metabolism, lysine biosynthesis, gabaculine; HET: PLP; 1.91A {Salmonella typhimurium} PDB: 2pb0_A*
Probab=100.00 E-value=4.2e-32 Score=258.76 Aligned_cols=335 Identities=16% Similarity=0.129 Sum_probs=233.1
Q ss_pred cCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHH
Q 014936 33 NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQA 112 (415)
Q Consensus 33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~a 112 (415)
+++.++||+.|......++ .+|.+.+++.+.+..... +.. ....++++.+++.+.+..| .+++++++|++++
T Consensus 55 ~g~~~lD~~~~~~~~~lG~-~~p~v~~ai~~~~~~~~~--~~~-~~~~~~~~~l~~~la~~~g----~~~v~~~~ggteA 126 (420)
T 2pb2_A 55 QGKEYIDFAGGIAVTALGH-CHPALVEALKSQGETLWH--TSN-VFTNEPALRLGRKLIDATF----AERVLFMNSGTEA 126 (420)
T ss_dssp TCCEEEESSHHHHTCTTCB-TCHHHHHHHHHHHTTCCC--CCT-TSCCHHHHHHHHHHHHHSS----CSEEEEESSHHHH
T ss_pred CCCEEEEccccccccccCC-CCHHHHHHHHHHHHhccc--ccC-ccCCHHHHHHHHHHHhhCC----CCeEEEeCCHHHH
Confidence 4678899988732111122 578999999999875321 111 1123455555555554443 5899999999999
Q ss_pred HHHHHHHhcC-------CC-CEEEEcCCCCcchHHH-HHhCCCe------------EEEeeccCCCCCCCChhHHHhhcC
Q 014936 113 IDVAMALLSR-------PG-ANILLPRPGFPIYELS-AAFRHIE------------VRHFDLLPDKGWEVDLDDIESLAD 171 (415)
Q Consensus 113 l~~~~~~l~~-------~g-d~vi~~~p~y~~~~~~-~~~~g~~------------~~~~~~~~~~~~~~~~~~l~~~~~ 171 (415)
+..+++++.. +| +.|++.+|+|+++... ....|.+ +..++. .|+++|+++++
T Consensus 127 ~~~al~~~~~~~~~~~~~g~~~vi~~~~~yh~~~~~~~~~~g~~~~~~~~~p~~~~~~~~~~-------~d~~~le~~i~ 199 (420)
T 2pb2_A 127 NETAFKLARHYACVRHSPFKTKIIAFHNAFHGRSLFTVSVGGQPKYSDGFGPKPADIIHVPF-------NDLHAVKAVMD 199 (420)
T ss_dssp HHHHHHHHHHHHHHHTCTTCCEEEEETTCCCCSSHHHHHHSSCHHHHTTSSSCCSCEEEECT-------TCHHHHHHHCC
T ss_pred HHHHHHHHHHHhhhccCCCCCEEEEEeCCcCCcCHHHHHhcCCccccccCCCCCCCeEEecC-------CCHHHHHHHhc
Confidence 9999998865 67 4999999999876543 3444543 333332 37999999998
Q ss_pred CCceEEEecCCCCcccc-CCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCC
Q 014936 172 QNTVALVIINPGNPCGN-VYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVP 250 (415)
Q Consensus 172 ~~~~~v~i~~p~nptG~-~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~ 250 (415)
+++++|+++.++|++|. +++.+++++|.++|+++|+++|+||+|.++.+.+... .+..++...+++ ||||.++ +
T Consensus 200 ~~~~~vi~~p~~~~gG~~~~~~~~l~~l~~l~~~~gi~lI~Dev~~g~~~~g~~~-~~~~~~~~~dii---t~sK~l~-~ 274 (420)
T 2pb2_A 200 DHTCAVVVEPIQGEGGVQAATPEFLKGLRDLCDEHQALLVFDEVQCGMGRTGDLF-AYMHYGVTPDIL---TSAKALG-G 274 (420)
T ss_dssp TTEEEEEECSEETTTTSEECCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSS-HHHHHTCCCSEE---EECGGGG-T
T ss_pred cCceEEEEeCCcCCCCeecCCHHHHHHHHHHHHHcCCEEEEEcCCcCcccCCcHH-HHHhcCCCCCeE---Eeccccc-C
Confidence 88888888777888884 6999999999999999999999999998776655422 112222223333 6899987 8
Q ss_pred CceEEEEEeeCCCCCCChHHHHHHHHhh-ccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcC---
Q 014936 251 GWRLGWFVTTDPCGMFRKPKVVERMKKY-FDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEI--- 326 (415)
Q Consensus 251 G~r~G~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~--- 326 (415)
|+|+||+++++ ++++.+... ...+++.+++++.++.++|+...+ ++..++++++++++.+.|+++
T Consensus 275 G~~iG~~~~~~--------~l~~~l~~~~~~~t~~~~~~~~aa~~a~L~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~ 343 (420)
T 2pb2_A 275 GFPVSAMLTTQ--------EIASAFHVGSHGSTYGGNPLACAVAGAAFDIINT---PEVLQGIHTKRQQFVQHLQAIDEQ 343 (420)
T ss_dssp TSCCEEEEECH--------HHHTTCC----CCEECCCHHHHHHHHHHHHHHSS---HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCceEEEEEhH--------HHHHhhcCCCcCcccCcCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHHHHhc
Confidence 99999999965 455554432 123456788888888887764221 355677777777787777654
Q ss_pred -CCCcCCCCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEe--eCChhhHHHHHHHHHH
Q 014936 327 -PCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTF--AVDPYSLEECLDRIKS 403 (415)
Q Consensus 327 -~~~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~--~~~~~~l~~~l~~l~~ 403 (415)
|.+. . .+..|.+++++++... ..+..++...++ ++||.+.|+. ++++|+++ ..+++++++++++|++
T Consensus 344 ~~~~~-~-~~~~g~~~~v~~~~~~---~~~~~~l~~~l~-~~Gi~v~~~~----~~~iRl~~~~~~t~eei~~~~~~l~~ 413 (420)
T 2pb2_A 344 FDIFS-D-IRGMGLLIGAELKPKY---KGRARDFLYAGA-EAGVMVLNAG----ADVMRFAPSLVVEEADIHEGMQRFAQ 413 (420)
T ss_dssp HCCEE-E-EEEETTEEEEEECGGG---TTCHHHHHHHHH-HTTEECEESS----TTEEEECCCTTCCHHHHHHHHHHHHH
T ss_pred CCCeE-E-EEecceEEEEEECCCc---hHHHHHHHHHHH-HCCCEEEeCC----CCEEEEECCCCCCHHHHHHHHHHHHH
Confidence 3333 2 2345778888876421 013566766665 5799999874 57999997 4789999999999999
Q ss_pred HHHHH
Q 014936 404 FYQRH 408 (415)
Q Consensus 404 ~~~~~ 408 (415)
+++++
T Consensus 414 ~l~~~ 418 (420)
T 2pb2_A 414 AVGKV 418 (420)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 88764
No 125
>1vef_A Acetylornithine/acetyl-lysine aminotransferase; PLP, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: PLP; 1.35A {Thermus thermophilus} SCOP: c.67.1.4 PDB: 1wkg_A* 1wkh_A*
Probab=100.00 E-value=1.9e-32 Score=259.35 Aligned_cols=336 Identities=18% Similarity=0.142 Sum_probs=233.0
Q ss_pred cCcceeEecccCCCCCCCCC-CcHHHHHHHHHHHhcCCC--CCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCCh
Q 014936 33 NEKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLSEKF--NGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGC 109 (415)
Q Consensus 33 ~~~~~i~l~~g~~~~~~~~~-~~~~~~~a~~~~~~~~~~--~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~ 109 (415)
+++.++||+.+.+... ++ +++.+++++.+.+..... ..|+ .....++++.+++++ +++++++++++|+
T Consensus 43 ~g~~~ld~~~~~~~~~--~g~~~~~v~~a~~~~~~~~~~~~~~~~-~~~~~~l~~~la~~~------~~~~~~v~~~~gg 113 (395)
T 1vef_A 43 EGNEYIDCVGGYGVAN--LGHGNPEVVEAVKRQAETLMAMPQTLP-TPMRGEFYRTLTAIL------PPELNRVFPVNSG 113 (395)
T ss_dssp TSCEEEESSHHHHTCT--TCBTCHHHHHHHHHHHHHCCCCCTTSC-CHHHHHHHHHHHHTS------CTTEEEEEEESSH
T ss_pred CCCEEEEccCcccccc--CCCCCHHHHHHHHHHHHhCCCCccccC-CHHHHHHHHHHHHhc------CCCcCEEEEcCcH
Confidence 3567889988853211 33 789999999998864321 1232 234455666666654 3467899999999
Q ss_pred HHHHHHHHHHhc--CCCCEEEEcCCCCcch-HHHHHhCCCeEEE---eeccCCCC--CCCChhHHHhhcCCCceEEEecC
Q 014936 110 TQAIDVAMALLS--RPGANILLPRPGFPIY-ELSAAFRHIEVRH---FDLLPDKG--WEVDLDDIESLADQNTVALVIIN 181 (415)
Q Consensus 110 ~~al~~~~~~l~--~~gd~vi~~~p~y~~~-~~~~~~~g~~~~~---~~~~~~~~--~~~~~~~l~~~~~~~~~~v~i~~ 181 (415)
++++.++++++. .+||.|++.+|+|++. ...+...|.+... .+...+.. ...|+++|++++++++++++++.
T Consensus 114 ~~a~~~al~~~~~~~~~~~vi~~~~~y~~~~~~~~~~~g~~~~~~~~~p~~~~~~~~~~~d~~~l~~~i~~~~~~v~~~~ 193 (395)
T 1vef_A 114 TEANEAALKFARAHTGRKKFVAAMRGFSGRTMGSLSVTWEPKYREPFLPLVEPVEFIPYNDVEALKRAVDEETAAVILEP 193 (395)
T ss_dssp HHHHHHHHHHHHHHHSCCEEEEETTCCCCSSHHHHHTCCCHHHHGGGCSCSSCEEEECTTCHHHHHHHCCTTEEEEEECS
T ss_pred HHHHHHHHHHHHHHhCCCeEEEEcCCcCCCchhhhhhcCCcccccccCCCCCCeeEeCCCcHHHHHHHhccCEEEEEEeC
Confidence 999999998764 5789999999999764 4455656665211 11100000 01489999999988888777655
Q ss_pred CCCccccCC-CHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEee
Q 014936 182 PGNPCGNVY-SYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTT 260 (415)
Q Consensus 182 p~nptG~~~-~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~ 260 (415)
++||||.++ +.+++++|+++|+++|+++|+||+|+++.+.+... ++...+...+++ ||||.+++ |+|+||++++
T Consensus 194 ~~~~tG~~~~~~~~l~~i~~l~~~~~~~li~Dea~~~~~~~g~~~-~~~~~~~~~d~~---s~sK~~~~-g~~~G~~~~~ 268 (395)
T 1vef_A 194 VQGEGGVRPATPEFLRAAREITQEKGALLILDEIQTGMGRTGKRF-AFEHFGIVPDIL---TLAKALGG-GVPLGVAVMR 268 (395)
T ss_dssp EETTTTSEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSS-THHHHTCCCSEE---EECGGGGT-TSSCEEEEEE
T ss_pred ccCCCCccCCCHHHHHHHHHHHHHcCCEEEEEecccCCccCCchh-HhhhcCCCCCEE---EEcccccC-CCceEEEEeh
Confidence 578999864 68889999999999999999999999754444321 122222222233 78999876 8999999997
Q ss_pred CCCCCCChHHHHHHHHhh-ccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCC-CCCCCc
Q 014936 261 DPCGMFRKPKVVERMKKY-FDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCP-HKPEGS 338 (415)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~-~~p~~g 338 (415)
+ ++++.+... ...+.+.+++.+.++.++|+... -++..++++++++++.+.|++++. ..+ ..+..|
T Consensus 269 ~--------~~~~~l~~~~~~~~~~~~~~~~~a~~~al~~~~---~~~~~~~~~~~~~~l~~~l~~~~~-~~~~~~~~~g 336 (395)
T 1vef_A 269 E--------EVARSMPKGGHGTTFGGNPLAMAAGVAAIRYLE---RTRLWERAAELGPWFMEKLRAIPS-PKIREVRGMG 336 (395)
T ss_dssp H--------HHHHTSCTTSSCCSSTTCHHHHHHHHHHHHHHH---HHTTHHHHHHHHHHHHHHHHTSCC-TTEEEEEEET
T ss_pred H--------HHHhhhccCCcCCCcCCCHHHHHHHHHHHHHHH---hCCHHHHHHHHHHHHHHHHHHhhc-CceEEEEEEE
Confidence 5 566655442 12245678888888888876421 135678888999999999988732 211 134567
Q ss_pred eEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEee--CChhhHHHHHHHHHHHH
Q 014936 339 MAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFA--VDPYSLEECLDRIKSFY 405 (415)
Q Consensus 339 ~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~--~~~~~l~~~l~~l~~~~ 405 (415)
+++|++++. +..++...+++++||.+.|+. .+++||+++ .+++++++++++|++++
T Consensus 337 ~~~~~~~~~-------~~~~l~~~l~~~~gi~v~~~~----~~~iRi~~~~~~~~~~i~~~~~~l~~~l 394 (395)
T 1vef_A 337 LMVGLELKE-------KAAPYIARLEKEHRVLALQAG----PTVIRFLPPLVIEKEDLERVVEAVRAVL 394 (395)
T ss_dssp TEEEEEESS-------CSHHHHHHHHHHHCEECEESS----TTEEEECCCTTCCHHHHHHHHHHHHHHH
T ss_pred EEEEEEEcC-------hHHHHHHHHHHHCCeEEecCC----CCEEEEeCCCCCCHHHHHHHHHHHHHHh
Confidence 889988863 245677777636799999863 589999884 68999999999998765
No 126
>1b9h_A AHBA synthase, protein (3-amino-5-hydroxybenzoic acid synthase); rifamycin biosynthesis (RIFD gene); HET: PLP; 2.00A {Amycolatopsis mediterranei} SCOP: c.67.1.4 PDB: 1b9i_A*
Probab=100.00 E-value=1e-30 Score=246.89 Aligned_cols=314 Identities=13% Similarity=0.112 Sum_probs=229.4
Q ss_pred HHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHh-cCCCCEEEEcCCC
Q 014936 55 HVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALL-SRPGANILLPRPG 133 (415)
Q Consensus 55 ~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l-~~~gd~vi~~~p~ 133 (415)
+.+++++.+.+..+.+ .|.+..+..++|+.++++++ . .+.|++++| ++++.+++.++ .++||+|+++.|+
T Consensus 17 ~~~~~a~~~~l~~~~~-~~~~~~~~~~l~~~la~~~~------~-~~~i~~~sG-t~al~~~l~~l~~~~gd~Vi~~~~~ 87 (388)
T 1b9h_A 17 DAERNGLVRALEQGQW-WRMGGDEVNSFEREFAAHHG------A-AHALAVTNG-THALELALQVMGVGPGTEVIVPAFT 87 (388)
T ss_dssp HHHHHHHHHHHHTSCC-BTTTCSHHHHHHHHHHHHTT------C-SEEEEESCH-HHHHHHHHHHTTCCTTCEEEEESSS
T ss_pred HHHHHHHHHHHHcCCe-eecCCHHHHHHHHHHHHHhC------C-CeEEEeCCH-HHHHHHHHHHcCCCCcCEEEECCCc
Confidence 8999999999876433 45556788999999999983 2 255666655 89999999999 8999999999999
Q ss_pred CcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEcc
Q 014936 134 FPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADE 213 (415)
Q Consensus 134 y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De 213 (415)
|+++...++..|++++.++++++ ++.+|+++|++++++++++|+ |+||||.+. ++++|.++|+++|+++|+|+
T Consensus 88 ~~~~~~~~~~~g~~~~~v~~~~~-~~~~d~~~l~~~i~~~~~~v~---~~n~tG~~~---~l~~i~~la~~~~~~li~D~ 160 (388)
T 1b9h_A 88 FISSSQAAQRLGAVTVPVDVDAA-TYNLDPEAVAAAVTPRTKVIM---PVHMAGLMA---DMDALAKISADTGVPLLQDA 160 (388)
T ss_dssp CTHHHHHHHHTTCEEEEECBCTT-TCCBCHHHHHHHCCTTEEEEC---CBCGGGCCC---CHHHHHHHHHHHTCCBCEEC
T ss_pred cHHHHHHHHHcCCEEEEEecCCC-cCCCCHHHHHHhcCcCceEEE---EeCCccCcC---CHHHHHHHHHHcCCEEEEec
Confidence 99999999999999999998653 467999999999987777655 999999995 57888888999999999999
Q ss_pred ccCCcc-cCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHH--HHHHHhhcc----------
Q 014936 214 VYGHLV-FGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKV--VERMKKYFD---------- 280 (415)
Q Consensus 214 ~~~~~~-~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~--~~~~~~~~~---------- 280 (415)
+|+.+. +.+. .+..++ .+.+.||||.++++|.|+||+++++.. + .+.+.....
T Consensus 161 a~~~g~~~~~~---~~~~~~----~i~~~S~s~~K~l~g~~~G~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~ 226 (388)
T 1b9h_A 161 AHAHGARWQGK---RVGELD----SIATFSFQNGKLMTAGEGGAVVFPDGE-------TEKYETAFLRHSCGRPRDDRRY 226 (388)
T ss_dssp TTCTTCEETTE---EGGGSS----SCEEEECCTTSSSCSSSCEEEEECTTC-------HHHHHHHHHHTBTTCCTTCSSC
T ss_pred chhcCCccCCe---eccccc----ceEEEEccCCCcccCCCeEEEEECCHH-------HHHHHHHHHHHhCCCCccCccc
Confidence 998643 3222 222232 377889997766777899999987622 4 444432211
Q ss_pred ------ccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCC-----CCCceEEEEecCccc
Q 014936 281 ------ILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHK-----PEGSMAVMLKLNLSL 349 (415)
Q Consensus 281 ------~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~-----p~~g~~~~~~l~~~~ 349 (415)
.+...++....++...++ ++++..++++++++++.+.|+++|++..... +.+++++|+.++...
T Consensus 227 ~~~~~g~~~~~~~~~~a~~~~~~~-----~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (388)
T 1b9h_A 227 FHKIAGSNMRLNEFSASVLRAQLA-----RLDEQIAVRDERWTLLSRLLGAIDGVVPQGGDVRADRNSHYMAMFRIPGLT 301 (388)
T ss_dssp CCCSCCCBCBCBHHHHHHHHHHHT-----THHHHHHHHHHHHHHHHHHHHTSTTCEECCCCTTCCBCCCSEEEEECTTCC
T ss_pred eeecccccCCcCHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHhccCCCccccCCCcCCCccceEEEEEEeCCcC
Confidence 011134444344333343 3667788888999999999998888773321 345789999886310
Q ss_pred cCCCCCHHHHHHHHHhhcCeEEEcCCCCCC-----------------------------CCeEEEEee--C-ChhhHHHH
Q 014936 350 LDDIIDDIDFCFKLAKEESVIILPGTAVGL-----------------------------KNWLRVTFA--V-DPYSLEEC 397 (415)
Q Consensus 350 ~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~-----------------------------~~~iRi~~~--~-~~~~l~~~ 397 (415)
..+..++...+ .++||.+.++..... .+.+|+++. + ++++++.+
T Consensus 302 ---~~~~~~l~~~L-~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~t~edi~~~ 377 (388)
T 1b9h_A 302 ---EERRNALVDRL-VEAGLPAFAAFRAIYRTDAFWELGAPDESVDAIARRCPNTDAISSDCVWLHHRVLLAGEPELHAT 377 (388)
T ss_dssp ---HHHHHHHHHHH-HHTTCCEEECCCCGGGSHHHHHSSCCSSCHHHHHHTCHHHHHHHHHEEEEEGGGGGSCHHHHHHH
T ss_pred ---cccHHHHHHHH-HHCCCCcccccCccccChHhHhcCCCcccccccccCCHHHHHHHhCeEEecCCCCCCCHHHHHHH
Confidence 00244566665 467999987653210 135999994 6 89999999
Q ss_pred HHHHHHHHHH
Q 014936 398 LDRIKSFYQR 407 (415)
Q Consensus 398 l~~l~~~~~~ 407 (415)
++.|++++++
T Consensus 378 ~~~l~~~~~~ 387 (388)
T 1b9h_A 378 AEIIADAVAR 387 (388)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHhh
Confidence 9999988753
No 127
>3ffr_A Phosphoserine aminotransferase SERC; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP MSE P33; 1.75A {Cytophaga hutchinsonii atcc 33406}
Probab=100.00 E-value=2.5e-31 Score=248.53 Aligned_cols=327 Identities=11% Similarity=0.034 Sum_probs=233.5
Q ss_pred ceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHH
Q 014936 36 KVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDV 115 (415)
Q Consensus 36 ~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~ 115 (415)
+.++|.-|. .++++.+.+++.+.+.......+.......++.+.+.+++.+.+|.. +++++++|+|+++++.+
T Consensus 4 ~~~~~~p~p------~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~-~~~~v~~~~g~t~al~~ 76 (362)
T 3ffr_A 4 NKIYFTPGP------SELYPTVRQHMITALDEKIGVISHRSKKFEEVYKTASDNLKTLLELP-SNYEVLFLASATEIWER 76 (362)
T ss_dssp CCEEECSSS------CCCCTTHHHHHHHHHHTTTTTSCTTSHHHHHHHHHHHHHHHHHTTCC-TTEEEEEESCHHHHHHH
T ss_pred cceeccCCC------cCCCHHHHHHHHHHhcCCccCcCCCCHHHHHHHHHHHHHHHHHhCCC-CCcEEEEeCCchHHHHH
Confidence 346666553 45678888888887765431111112233355555555555555532 56789999999999999
Q ss_pred HHHHhcCCCCEEEEcCCCCc-chHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHH
Q 014936 116 AMALLSRPGANILLPRPGFP-IYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQH 194 (415)
Q Consensus 116 ~~~~l~~~gd~vi~~~p~y~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~ 194 (415)
++.++.++ +.+++..+.|. .+...++..|+++..++.+ .++.+|+++++ ++++++++++++|+||||.+++
T Consensus 77 ~~~~l~~~-~~i~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~--~~~~~~~v~~~~~~nptG~~~~--- 148 (362)
T 3ffr_A 77 IIQNCVEK-KSFHCVNGSFSKRFYEFAGELGREAYKEEAA--FGKGFYPADIT--VPADAEIICLTHNETSSGVSMP--- 148 (362)
T ss_dssp HHHHHCSS-EEEEEECSHHHHHHHHHHHHTTCEEEEEECC--TTCCCCGGGCC--CCTTCCEEEEESEETTTTEECC---
T ss_pred HHHhccCC-cEEEEcCcHHHHHHHHHHHHhCCCeEEEecC--CCCCCCHHHHh--ccCCccEEEEEcCCCCcceeCC---
Confidence 99999987 55555665665 2345677889999999874 34678999998 7778999999999999999987
Q ss_pred HHHHHHHHhhc-CcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccC-CCCceEEEEEeeCCCCCCChHHHH
Q 014936 195 LQKLAETANKL-KTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWI-VPGWRLGWFVTTDPCGMFRKPKVV 272 (415)
Q Consensus 195 l~~i~~~~~~~-~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~-~~G~r~G~~~~~~~~~~~~~~~~~ 272 (415)
+++|+++|+++ |+++|+|++|+.+... ..+.. ..+++.|+||+++ ++| +|++++++ +++
T Consensus 149 l~~i~~la~~~p~~~li~D~a~~~~~~~----~~~~~-----~d~~~~s~~K~~~~~~G--~g~~~~~~--------~~~ 209 (362)
T 3ffr_A 149 VEDINTFRDKNKDALIFVDAVSSLPYPK----FDWTK-----IDSVFFSVQKCFGLPAG--LGVWILND--------RVI 209 (362)
T ss_dssp HHHHTTSGGGSTTSEEEEECTTTTTSSC----CCTTS-----CSEEEEETTSTTCCCSC--CEEEEEEH--------HHH
T ss_pred HHHHHHHHHhCCCCEEEEecccccCCcc----cChhH-----CcEEEEecccccCCCCc--eEEEEECH--------HHH
Confidence 77788889999 9999999999864321 11111 2378899999987 677 56677754 565
Q ss_pred HHHHhhcc----------------------ccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCc
Q 014936 273 ERMKKYFD----------------------ILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCIS 330 (415)
Q Consensus 273 ~~~~~~~~----------------------~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~ 330 (415)
+.+..... ..++++...+.++..+++......+++..++++++++++.+.|+++|++.
T Consensus 210 ~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~ 289 (362)
T 3ffr_A 210 EKSKALLAKRKSIGTYHTIPSMLEKARVNQTPETPNAMNIFLLGKVTGDMLQISADGIRKQTEEKAALINTYIESSKVFS 289 (362)
T ss_dssp HHHHHHHHTTCCCCSTTSHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCSSEE
T ss_pred HHhhhccccCCCCcccccHHHHHHHhhcCCCCCCchHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHccCce
Confidence 55554321 13456667777776666532223378888999999999999999998887
Q ss_pred CCCCC----CCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEee--CChhhHHHHHHHHHHH
Q 014936 331 CPHKP----EGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFA--VDPYSLEECLDRIKSF 404 (415)
Q Consensus 331 ~~~~p----~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~--~~~~~l~~~l~~l~~~ 404 (415)
.+ .| ..+.++|+.++. +..++...+.+ +||.+.+|..+..++++|++++ .++++++.+++.|+++
T Consensus 290 ~~-~~~~~~~~~~~~~~~~~~-------~~~~~~~~l~~-~gi~~~~g~~~~~~~~iRis~~~~~~~e~i~~l~~~l~~~ 360 (362)
T 3ffr_A 290 FG-VEDAKLRSMTTIVANTTM-------LPGEINKILEP-FDMAVGAGYGSKKETQIRIANFPAHSLEQVHKLVQTLKEK 360 (362)
T ss_dssp ES-SSCGGGBCSSEEEEEESS-------CHHHHHHHHGG-GTEEEEECSGGGTTTEEEEECCTTSCHHHHHHHHHHHHHH
T ss_pred ec-cCChhhcCCceEEEecCC-------CHHHHHHHHHH-CCeEEecCccccCCCEEEEECCCCCCHHHHHHHHHHHHHH
Confidence 43 32 235677777753 46677777654 5999999876666789999995 5789999999998875
Q ss_pred H
Q 014936 405 Y 405 (415)
Q Consensus 405 ~ 405 (415)
+
T Consensus 361 ~ 361 (362)
T 3ffr_A 361 I 361 (362)
T ss_dssp T
T ss_pred h
Confidence 3
No 128
>2ez2_A Beta-tyrosinase, tyrosine phenol-lyase; PLP-dependent enzyme, pyridoxal-5'-phosphate, domain lyase; 1.85A {Citrobacter freundii} PDB: 2ez1_A 2vlf_A* 2vlh_A* 2yct_A* 1tpl_A 2tpl_A* 2ycn_A* 2yhk_A* 2ycp_A* 1c7g_A*
Probab=100.00 E-value=3.1e-31 Score=255.86 Aligned_cols=322 Identities=15% Similarity=0.120 Sum_probs=223.6
Q ss_pred CCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcC
Q 014936 52 HTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPR 131 (415)
Q Consensus 52 ~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~ 131 (415)
++.+.+.+++. .. ...|.+..+..+||+++++++ ..+++++++|+++++..++.++.++|| +++.
T Consensus 55 ~~~~~~~~a~~----~~-~~~y~~~~~~~~l~~~la~~~--------~~~~~~~~~~gt~a~~~al~~l~~~gd--i~~~ 119 (456)
T 2ez2_A 55 AMSDKQWAGMM----MG-DEAYAGSENFYHLERTVQELF--------GFKHIVPTHQGRGAENLLSQLAIKPGQ--YVAG 119 (456)
T ss_dssp CCCHHHHHHHT----TC-CCCSSSCHHHHHHHHHHHHHH--------CCSEEEEESSHHHHHHHHHHHHCCTTC--EEEE
T ss_pred cCCHHHHHHhh----cc-hhhcccChhHHHHHHHHHHHh--------CCCcEEEeCCcHHHHHHHHHHhCCCCC--Eecc
Confidence 44566666664 22 235777778899999999998 345899999999999999999999999 7888
Q ss_pred CCC-cchHHHHHhCCCeEEEeeccC----CC----CCCCChhHHHhhcCCCc----eEEEecCCCC-ccccCCCHHHHHH
Q 014936 132 PGF-PIYELSAAFRHIEVRHFDLLP----DK----GWEVDLDDIESLADQNT----VALVIINPGN-PCGNVYSYQHLQK 197 (415)
Q Consensus 132 p~y-~~~~~~~~~~g~~~~~~~~~~----~~----~~~~~~~~l~~~~~~~~----~~v~i~~p~n-ptG~~~~~~~l~~ 197 (415)
|+| ..+...+...|.+++.+++++ ++ ++.+|+++|++++++++ +++++++|+| |||.+++.+++++
T Consensus 120 ~~~~~~~~~~~~~~G~~~~~v~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~t~~~~~~v~l~~p~n~ptG~~~~~~~l~~ 199 (456)
T 2ez2_A 120 NMYFTTTRYHQEKNGAVFVDIVRDEAHDAGLNIAFKGDIDLKKLQKLIDEKGAENIAYICLAVTVNLAGGQPVSMANMRA 199 (456)
T ss_dssp SSCCHHHHHHHHHTTCEEEECBCGGGGCTTCCCSCTTCBCHHHHHHHHHHHCGGGEEEEEEESSBTTTTSBCCCHHHHHH
T ss_pred ccccchhHHHHHHcCCEEEEecccccccccccccccCCCCHHHHHHHHHhccccceeEEEEeccCCCCCCccCCHHHHHH
Confidence 999 677888899999999988763 12 36789999999887655 8889999998 9999999999999
Q ss_pred HHHHHhhcCcEEEEccccCC----------cccCCCCccccc-ccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCC
Q 014936 198 LAETANKLKTLVIADEVYGH----------LVFGDKPFVPMG-VFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMF 266 (415)
Q Consensus 198 i~~~~~~~~~~li~De~~~~----------~~~~~~~~~~~~-~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~ 266 (415)
|+++|++||+++|+||+|+. ..+.+....++. .+....+++++ |++|. +++| +.||+++++
T Consensus 200 i~~la~~~~i~li~De~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~~-S~kk~-~~~~-~gG~~~~~~----- 271 (456)
T 2ez2_A 200 VRELTEAHGIKVFYDATRCVENAYFIKEQEQGFENKSIAEIVHEMFSYADGCTM-SGKKD-CLVN-IGGFLCMND----- 271 (456)
T ss_dssp HHHHHHHTTCCEEEECTTHHHHHHHHHHHSTTCTTSCHHHHHHHHHTTCSEEEE-ETTTT-TCCS-SCEEEEESC-----
T ss_pred HHHHHHHcCCeEEEEccccccccccccccccccCCcchhhhhhhhcccCCEEEE-eCccc-CCCC-ceeEEEECC-----
Confidence 99999999999999999986 334443211110 11111234555 77887 5566 789998843
Q ss_pred ChHHHHHHHHhhccc------cCCchhHHHHH-HHHhhCCCcHHHH-HHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCc
Q 014936 267 RKPKVVERMKKYFDI------LGDPATFIQAA-VPSILQQPDEVFF-KKTLNLLKQSVDICYNKIKEIPCISCPHKPEGS 338 (415)
Q Consensus 267 ~~~~~~~~~~~~~~~------~~~~~~~~~~a-~~~~l~~~~~~~~-~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g 338 (415)
+++++.+...... ..+.+.....+ +...++ .+ +...++.+++.+++.+.|++. ++. +..|.++
T Consensus 272 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~a~~~~~-----~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~p~~~ 342 (456)
T 2ez2_A 272 --DEMFSSAKELVVVYEGMPSYGGLAGRDMEAMAIGLRE-----AMQYEYIEHRVKQVRYLGDKLKAA-GVP-IVEPVGG 342 (456)
T ss_dssp --HHHHHHHHHHHHHHTCCTTTTTCCHHHHHHHHHHHHH-----HTCHHHHHHHHHHHHHHHHHHHHT-TCC-BCSSCCS
T ss_pred --HHHHHHHHHHHhhccCcccccCcchhHHHHHHHHHHH-----HhHHHHHHHHHHHHHHHHHHHhcC-CCc-cccCCCc
Confidence 2566665543211 11222222222 333332 22 344455566677788888775 776 4468889
Q ss_pred eEEEEecCccccCCCCCHHHH-----HHHHHhhcCeEEEc-CCCC------------CCCCeEEEEee---CChhhHHHH
Q 014936 339 MAVMLKLNLSLLDDIIDDIDF-----CFKLAKEESVIILP-GTAV------------GLKNWLRVTFA---VDPYSLEEC 397 (415)
Q Consensus 339 ~~~~~~l~~~~~~~~~~~~~~-----~~~ll~~~gi~v~~-g~~~------------~~~~~iRi~~~---~~~~~l~~~ 397 (415)
+++|+.+.... ++ .+..++ ...+++++||.+.+ |..| ...+++||+++ .++++++++
T Consensus 343 ~~~~~~~~~~~-~~-~~~~~~~~~~l~~~L~~~~gv~~~~~g~~~~~~~~~~g~~~~~~~~~iRis~~~~~~t~e~i~~~ 420 (456)
T 2ez2_A 343 HAVFLDARRFC-EH-LTQDEFPAQSLAASIYVETGVRSMERGIISAGRNNVTGEHHRPKLETVRLTIPRRVYTYAHMDVV 420 (456)
T ss_dssp SEEEEEHHHHT-TT-SCGGGCHHHHHHHHHHHHHSEECEEESHHHHCBCTTTCSBCCCSCCEEEEECCTTTCCHHHHHHH
T ss_pred eEEEEEhHHhc-CC-CChhhccHHHHHHHHHHhcCeeeecccccccccCccccccccCCCCeEEEEeCCCCCCHHHHHHH
Confidence 99998763100 01 122233 56665778998765 4322 11378999996 689999999
Q ss_pred HHHHHHHHHH
Q 014936 398 LDRIKSFYQR 407 (415)
Q Consensus 398 l~~l~~~~~~ 407 (415)
+++|++++++
T Consensus 421 ~~~l~~~l~~ 430 (456)
T 2ez2_A 421 ADGIIKLYQH 430 (456)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHHhh
Confidence 9999998875
No 129
>2dkj_A Serine hydroxymethyltransferase; PLP dependent enzyme, structural genomics; HET: PLP; 1.15A {Thermus thermophilus}
Probab=100.00 E-value=7.2e-32 Score=256.45 Aligned_cols=336 Identities=14% Similarity=0.130 Sum_probs=236.4
Q ss_pred CcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCC---CcHH--HHH-----HHHHHHhhhCCCCCCCCcE
Q 014936 34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTA---GLPL--TRR-----AIAEYLSRDLPYKLTPNDV 103 (415)
Q Consensus 34 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~---g~~~--lr~-----~ia~~~~~~~~~~~~~~~i 103 (415)
.+++++|..|.+. .++.+.+++.+.+.......|+... |.+. +++ .+++++ | ++++++
T Consensus 22 ~~~~i~~~~~~~~------~~~~v~~a~~~~~~~~~~~~y~~~~~~~g~~~~~~~e~~ar~~la~~~----g--~~~~~i 89 (407)
T 2dkj_A 22 QREGLELIASENF------VSKQVREAVGSVLTNKYAEGYPGARYYGGCEVIDRVESLAIERAKALF----G--AAWANV 89 (407)
T ss_dssp HHTSEECCTTCCC------CCHHHHHHHTSGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHH----T--CSEEEC
T ss_pred hhcceeeccCCCC------CCHHHHHHHHhhhhcCcccCCCcccccCCchHHHHHHHHHHHHHHHHh----C--CCcceE
Confidence 3578999999843 2799999998887642234555432 4443 333 555555 3 445555
Q ss_pred EEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchH---HHHHhCCCeEEEeeccC-CCCCCCChhHHHhhcCC-CceEEE
Q 014936 104 FVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYE---LSAAFRHIEVRHFDLLP-DKGWEVDLDDIESLADQ-NTVALV 178 (415)
Q Consensus 104 ~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~---~~~~~~g~~~~~~~~~~-~~~~~~~~~~l~~~~~~-~~~~v~ 178 (415)
++++| ++++..++.++.++||+|+++.|+|+.+. ..+...|..+..++... .+++.+|++++++.+++ ++++++
T Consensus 90 ~~~sG-t~a~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~v~ 168 (407)
T 2dkj_A 90 QPHSG-SQANMAVYMALMEPGDTLMGMDLAAGGHLTHGSRVNFSGKLYKVVSYGVRPDTELIDLEEVRRLALEHRPKVIV 168 (407)
T ss_dssp CCSSH-HHHHHHHHHHHCCTTCEEEEECGGGTCCGGGTCTTSHHHHHSEEEEECCCTTTSSCCHHHHHHHHHHHCCSEEE
T ss_pred Eecch-HHHHHHHHHHhcCCCCEEEEecccccCccchHHHHHhcCceEEEEecCCCcccCccCHHHHHHHHhhcCCeEEE
Confidence 56665 56999999999999999999999999873 44445555333333321 13567999999998874 788888
Q ss_pred ecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCC-cccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEE
Q 014936 179 IINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGH-LVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWF 257 (415)
Q Consensus 179 i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~-~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~ 257 (415)
+++|+|| ... ++++|.++|+++|+++|+||+|+. +.+.+.....+ . ...++++|+||+ ++|+|+||+
T Consensus 169 ~~~p~~~--~~~---~l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~~---~--~~di~~~s~sK~--l~g~~~G~~ 236 (407)
T 2dkj_A 169 AGASAYP--RFW---DFKAFREIADEVGAYLVVDMAHFAGLVAAGLHPNPL---P--YAHVVTSTTHKT--LRGPRGGLI 236 (407)
T ss_dssp ECCSSCC--SCC---CHHHHHHHHHHHTCEEEEECTTTHHHHHTTCSCCCT---T--TCSEEEEESSGG--GCCCSCEEE
T ss_pred EeccccC--CCC---CHHHHHHHHHHcCCEEEEEccccccccccCccCCcc---c--cccEEEEecccc--CCCCCceEE
Confidence 8999998 443 388999999999999999999997 44443322111 1 135889999996 458889999
Q ss_pred EeeCCCCCCChHHHHHHHHhhcc-c-cCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCC
Q 014936 258 VTTDPCGMFRKPKVVERMKKYFD-I-LGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKP 335 (415)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p 335 (415)
++++ +++++.+..... . ..++++....++.++++.....++++..++++++++++.+.|+++ ++.++..+
T Consensus 237 ~~~~-------~~~~~~l~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~ 308 (407)
T 2dkj_A 237 LSND-------PELGKRIDKLIFPGIQGGPLEHVIAGKAVAFFEALQPEFKEYSRLVVENAKRLAEELARR-GYRIVTGG 308 (407)
T ss_dssp EESC-------HHHHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHT-TCEEGGGS
T ss_pred EECC-------HHHHHHHHhhhcccccCCCcHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhC-CceeecCC
Confidence 9863 257777765432 1 234444444455555543223677889999999999999999988 77733225
Q ss_pred CCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCC------CCCCeEEEEee------CChhhHHHHHHHHHH
Q 014936 336 EGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAV------GLKNWLRVTFA------VDPYSLEECLDRIKS 403 (415)
Q Consensus 336 ~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~------~~~~~iRi~~~------~~~~~l~~~l~~l~~ 403 (415)
..++++|+.++... .+..++...+ .++||.+.+|..+ ..++++|++++ .++++++.++++|++
T Consensus 309 ~~~~~~~~~~~~~~----~~~~~~~~~l-~~~gi~v~~~~~~~~~~~~~~~~~iRis~~~~~~~~~~~~~i~~~~~~l~~ 383 (407)
T 2dkj_A 309 TDNHLFLVDLRPKG----LTGKEAEERL-DAVGITVNKNAIPFDPKPPRVTSGIRIGTPAITTRGFTPEEMPLVAELIDR 383 (407)
T ss_dssp CSSSEEEEECGGGT----CCHHHHHHHH-HHTTEECEECCCTTCSSCTTTCSEEEEECHHHHHTTCCGGGHHHHHHHHHH
T ss_pred CCceEEEEECcccC----CCHHHHHHHH-HHcCceecCCcCccccccccCCCceeeecccccccCCCHHHHHHHHHHHHH
Confidence 67889999886421 1355565555 6789999998753 23578999994 789999999999999
Q ss_pred HHHH
Q 014936 404 FYQR 407 (415)
Q Consensus 404 ~~~~ 407 (415)
++++
T Consensus 384 ~~~~ 387 (407)
T 2dkj_A 384 ALLE 387 (407)
T ss_dssp HHHH
T ss_pred HHhc
Confidence 9887
No 130
>3vax_A Putative uncharacterized protein DNDA; desulfurase, transferase; HET: PLP; 2.40A {Streptomyces lividans}
Probab=100.00 E-value=5e-33 Score=263.80 Aligned_cols=338 Identities=14% Similarity=0.083 Sum_probs=219.9
Q ss_pred cCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCC---CCCC----CCCCcHHHHHHHHHHHhhhCCCCCCCCcEEE
Q 014936 33 NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKF---NGYA----PTAGLPLTRRAIAEYLSRDLPYKLTPNDVFV 105 (415)
Q Consensus 33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~---~~y~----~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i 105 (415)
+.+..+.|+.+.+ .++++.+++++.+.+..... ..|. ......++++.+++++ +++++++++
T Consensus 17 ~~~~~iyld~~~~-----~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~------~~~~~~v~~ 85 (400)
T 3vax_A 17 RGSHMTYLDAAAT-----TRVDQRVADIVLHWMTAEFGNAGSRHEYGIRAKRGVERAREYLASTV------SAEPDELIF 85 (400)
T ss_dssp -----CCCCCCCC-----SSSCHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHHHHHHHHHHHHHT------TCCGGGEEE
T ss_pred ccCCcEEecCCCC-----CCCCHHHHHHHHHHHHhccCCCcccchhHHHHHHHHHHHHHHHHHHc------CCCCCcEEE
Confidence 4556677776653 35678999999888753110 0111 1122456777777776 356789999
Q ss_pred eCChHHHHHHHHHHhc----CCCC-EEEEcCCCCcchHHHHH---hCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEE
Q 014936 106 TSGCTQAIDVAMALLS----RPGA-NILLPRPGFPIYELSAA---FRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVAL 177 (415)
Q Consensus 106 ~~g~~~al~~~~~~l~----~~gd-~vi~~~p~y~~~~~~~~---~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v 177 (415)
|+|+++++.+++.++. ++|| .|+++.++|+++...+. ..|++++.++.++ ++.+|+++|+++++++++++
T Consensus 86 ~~g~t~al~~~~~~l~~~~~~~gd~~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~~~~~v 163 (400)
T 3vax_A 86 TSGATESNNIALLGLAPYGERTGRRHIITSAIEHKAVLEPLEHLAGRGFEVDFLTPGP--SGRISVEGVMERLRPDTLLV 163 (400)
T ss_dssp ESCHHHHHHHHHHTTHHHHHHHTCCEEEEETTSCHHHHHHHHHHHTTTCEEEEECCCT--TCCCCHHHHHTTCCTTEEEE
T ss_pred eCCHHHHHHHHHHHHHHhhccCCCCEEEECccccHhHHHHHHHHHhcCCeEEEEccCC--CCCcCHHHHHHhcCCCceEE
Confidence 9999999999999997 8999 99999999998766554 3699999998754 45689999999999899999
Q ss_pred EecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEE
Q 014936 178 VIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWF 257 (415)
Q Consensus 178 ~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~ 257 (415)
++++|+||||.+++ +++|+++|+++|+++|+|++|+... ....+..+ ..+++.|+||.++.+| +|++
T Consensus 164 ~~~~~~nptG~~~~---l~~i~~la~~~~~~li~D~a~~~~~----~~~~~~~~----~d~~~~s~~K~~g~~g--~g~~ 230 (400)
T 3vax_A 164 SLMHVNNETGVIQP---VAELAQQLRATPTYLHVDAAQGYGK----VPGDLTTP----IDMISISGHKIGAPKG--VGAL 230 (400)
T ss_dssp ECCSBCTTTCBBCC---HHHHHHHHTTSSCEEEEECTTTTTT----SGGGGGSC----CSEEEEETGGGTSCSS--CEEE
T ss_pred EEECCCCCceeeCc---HHHHHHHHHhcCCEEEEEhhhhcCC----CCcChhhc----CcEEEEeHHHhCCCCc--eEEE
Confidence 99999999999977 6788899999999999999998532 22222222 2388899999866555 6777
Q ss_pred E-eeCCCCCCChHHHHHHHH----hhccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCC
Q 014936 258 V-TTDPCGMFRKPKVVERMK----KYFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCP 332 (415)
Q Consensus 258 ~-~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~ 332 (415)
+ ++++........+...+. ......++.+...+.++..+++.. .+++++.+++++++++++.+.|+ .+++.+.
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~-~~~~~~~~~~~~~~~~~l~~~L~-~~~~~~~ 308 (400)
T 3vax_A 231 VTRRREEMDDERVPLEPIMFGGGQERKLRPGTLPVPLIMGLAEAAKIF-EAEHAQWQVAAQDLRSRLLAGLA-STSFQVN 308 (400)
T ss_dssp EECBCSSSTTCBCCCCCSSCSSCTGGGTSCSCCCHHHHHHHHHHHHHH-HHSHHHHHHHHHHHHHHHHHHHT-TTTCEEC
T ss_pred EEecchhccccccccCceecCCCceeeeecCCCCHHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHHHHhhC-CCCEEEe
Confidence 7 665210000000101000 011123455666776666666431 24578889999999999999998 7788733
Q ss_pred CCCCC---ceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCC-------------------CCeEEEEe-e-
Q 014936 333 HKPEG---SMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGL-------------------KNWLRVTF-A- 388 (415)
Q Consensus 333 ~~p~~---g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~-------------------~~~iRi~~-~- 388 (415)
.+.+ +.++++.++. .+..++...+. +||.+.+|..|.. .+++||++ +
T Consensus 309 -~~~~~~~~~~~~~~~~~------~~~~~l~~~L~--~gi~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRls~~~~ 379 (400)
T 3vax_A 309 -GDQDHVVPHILNLSFED------VDAEAFLVTLK--DLVAVATGSASTSASFTPSHVLRAMGLPEEAASKSLRFSWTPG 379 (400)
T ss_dssp -SCTTSBCTTEEEEECTT------CCHHHHHHHHH--HHHHHTTTTEEEEEEECCHHHHHTTTCCHHHHTSEEEEEEEEC
T ss_pred -CCcccCCCCEEEEEeCC------CCHHHHHHHHh--cCcEEEecccccCCCCCccHHHHHcCCCccccCceEEEEccCC
Confidence 4443 3466666652 24666766664 7999999875532 38999999 6
Q ss_pred -CChhhHHHHHHHHHHHHHH
Q 014936 389 -VDPYSLEECLDRIKSFYQR 407 (415)
Q Consensus 389 -~~~~~l~~~l~~l~~~~~~ 407 (415)
.++++++.++++|++++++
T Consensus 380 ~~t~e~i~~~~~~l~~~~~~ 399 (400)
T 3vax_A 380 QATDLDVEELARGVAKLKPS 399 (400)
T ss_dssp --------------------
T ss_pred CCCHHHHHHHHHHHHHHhcc
Confidence 5789999999999988754
No 131
>1zod_A DGD, 2,2-dialkylglycine decarboxylase; pyridoxal, cesium, lyase; HET: MES PLP; 1.80A {Burkholderia cepacia} SCOP: c.67.1.4 PDB: 1dka_A* 1m0o_A* 1m0p_A* 1m0n_A* 1zc9_A* 1zob_A* 1m0q_A* 2dkb_A* 1dgd_A* 1dge_A* 1d7u_A* 1d7s_A* 1d7r_A* 1d7v_A* 1z3z_A*
Probab=100.00 E-value=3.7e-32 Score=260.54 Aligned_cols=349 Identities=13% Similarity=0.031 Sum_probs=230.7
Q ss_pred cCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCC--CCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChH
Q 014936 33 NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKF--NGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCT 110 (415)
Q Consensus 33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~--~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~ 110 (415)
+++.++||..+.+....+. .+|.+++++.+.+..... ..|+ .++++.+++.+.+..+ +++++|++++|++
T Consensus 41 ~g~~~lD~~~~~~~~~lG~-~~p~v~~a~~~~~~~~~~~~~~~~-----~~~~~~l~~~la~~~~--~~~~~v~~~~gg~ 112 (433)
T 1zod_A 41 DGRAILDFTSGQMSAVLGH-CHPEIVSVIGEYAGKLDHLFSEML-----SRPVVDLATRLANITP--PGLDRALLLSTGA 112 (433)
T ss_dssp TCCEEEETTHHHHTCTTCB-TCHHHHHHHHHHHHHCCCCCTTCC-----CHHHHHHHHHHHHHSC--TTCCEEEEESCHH
T ss_pred CCCEEEEcccchhccccCC-CCHHHHHHHHHHHHhCcccccccC-----CHHHHHHHHHHHHhCC--CCcCEEEEeCchH
Confidence 4667889977764322222 478999999998865321 1232 2344444444444443 4578999999999
Q ss_pred HHHHHHHHHhc--CCCCEEEEcCCCCcchHHHHHhCC------------CeEEEeeccC--CCCC--------CCChhHH
Q 014936 111 QAIDVAMALLS--RPGANILLPRPGFPIYELSAAFRH------------IEVRHFDLLP--DKGW--------EVDLDDI 166 (415)
Q Consensus 111 ~al~~~~~~l~--~~gd~vi~~~p~y~~~~~~~~~~g------------~~~~~~~~~~--~~~~--------~~~~~~l 166 (415)
+++..+++.+. ..+++|++.+|+|++....+.... ..+..++... ...+ .+|++.|
T Consensus 113 ea~~~a~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~d~~~l 192 (433)
T 1zod_A 113 ESNEAAIRMAKLVTGKYEIVGFAQSWHGMTGAAASATYSAGRKGVGPAAVGSFAIPAPFTYRPRFERNGAYDYLAELDYA 192 (433)
T ss_dssp HHHHHHHHHHHHHHTCCEEEEETTCCCCSSHHHHHTCCSSCCSSSCCCCTTEEEECCCCTTSCCCEETTEECHHHHHHHH
T ss_pred HHHHHHHHHHHHhhCCCeEEEECCCcCCCChhHHhhcCCccccccCCCCCCceEecCCcccccccCCchhhhHHHHHHHH
Confidence 99999998653 235799999999987665443221 1333333311 1111 1358999
Q ss_pred HhhcCC---CceEEEecCC-CCcccc-CCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEc
Q 014936 167 ESLADQ---NTVALVIINP-GNPCGN-VYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLG 241 (415)
Q Consensus 167 ~~~~~~---~~~~v~i~~p-~nptG~-~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 241 (415)
++.+++ ....+++++| +||||. +++.+++++|+++|++||+++|+||+|.++.+.+.. ..+...+...+ +.
T Consensus 193 e~~l~~~~~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~~~g~~g~~-~~~~~~~~~~d---i~ 268 (433)
T 1zod_A 193 FDLIDRQSSGNLAAFIAEPILSSGGIIELPDGYMAALKRKCEARGMLLILDEAQTGVGRTGTM-FACQRDGVTPD---IL 268 (433)
T ss_dssp HHHHHHHCCSCEEEEEECSEETTTTCEECCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSS-STHHHHTCCCS---EE
T ss_pred HHHHHhcCCCCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCcCchH-hHHhhcCCCCC---EE
Confidence 988863 3344566778 588996 578899999999999999999999999987654431 11222222222 33
Q ss_pred cCccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhhc-c--ccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHH
Q 014936 242 SLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYF-D--ILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDI 318 (415)
Q Consensus 242 s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~ 318 (415)
|+||.|++ |+|+||+++++ ++++.+.... . .+.+.+++++.++.++|+...+ +...+++++++++
T Consensus 269 s~sK~~~~-G~~ig~~~~~~--------~~~~~~~~~~~~~~~t~~~~~~~~~a~~aal~~~~~---~~~~~~~~~~~~~ 336 (433)
T 1zod_A 269 TLSKTLGA-GLPLAAIVTSA--------AIEERAHELGYLFYTTHVSDPLPAAVGLRVLDVVQR---DGLVARANVMGDR 336 (433)
T ss_dssp EECHHHHT-TSSCEEEEECH--------HHHHHHHHTTCCCCCTTTTCHHHHHHHHHHHHHHHH---TTHHHHHHHHHHH
T ss_pred EecccccC-CCCeeEEEEhH--------HHHHhhccCCCCCCCCCCcCHHHHHHHHHHHHHHHh---CCHHHHHHHHHHH
Confidence 89999876 99999999965 6777776531 1 3456788899888888753211 2345666666677
Q ss_pred HHHHhhc----CCCCcCCCCCCCceEEEEecCcccc---CCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEe--eC
Q 014936 319 CYNKIKE----IPCISCPHKPEGSMAVMLKLNLSLL---DDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTF--AV 389 (415)
Q Consensus 319 l~~~l~~----~~~~~~~~~p~~g~~~~~~l~~~~~---~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~--~~ 389 (415)
+.+.|++ +|.+. . .+..|.|+|++++.... +......++...++ ++||.+.||..|+.++++||++ ..
T Consensus 337 l~~~l~~l~~~~~~~~-~-~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~~~~~~~~~lRi~~~~~~ 413 (433)
T 1zod_A 337 LRRGLLDLMERFDCIG-D-VRGRGLLLGVEIVKDRRTKEPADGLGAKITRECM-NLGLSMNIVQLPGMGGVFRIAPPLTV 413 (433)
T ss_dssp HHHHHHHHHHHCTTEE-E-EEEETTEEEEEEEEETTTTEECTTHHHHHHHHHH-HTTEECCEECCTTSCCEEEECCCTTC
T ss_pred HHHHHHHHHHhCCCeE-E-EEEEEEEEEEEEecCccccCCChHHHHHHHHHHH-HCCCeEeccCCCCCCCEEEEECCcCC
Confidence 7666654 34333 2 34457788887753110 00012456666665 6799999988766568999987 47
Q ss_pred ChhhHHHHHHHHHHHHHHH
Q 014936 390 DPYSLEECLDRIKSFYQRH 408 (415)
Q Consensus 390 ~~~~l~~~l~~l~~~~~~~ 408 (415)
+++++++++++|+++++++
T Consensus 414 t~~~i~~~l~~l~~~l~~~ 432 (433)
T 1zod_A 414 SEDEIDLGLSLLGQAIERA 432 (433)
T ss_dssp CHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHh
Confidence 8999999999999988653
No 132
>1s0a_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; fold type I, subclass II, homodimer; HET: LLP; 1.71A {Escherichia coli} SCOP: c.67.1.4 PDB: 1qj5_A* 1mlz_A* 1qj3_A* 1mly_A* 1s06_A* 1s08_A* 1s09_A* 1s07_A* 1mgv_A* 1dty_A*
Probab=100.00 E-value=1.8e-31 Score=255.36 Aligned_cols=338 Identities=16% Similarity=0.110 Sum_probs=231.8
Q ss_pred cCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCC---CCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCCh
Q 014936 33 NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKF---NGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGC 109 (415)
Q Consensus 33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~---~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~ 109 (415)
+++.++|++.+.+....+. .+|.+++++.+.+..... ..|+. ....++++.+++++ ++++++|++|+|+
T Consensus 41 ~g~~ylD~~~~~~~~~lg~-~~p~v~~a~~~~~~~~~~~~~~~~~~-~~~~~l~~~la~~~------~~~~~~v~~~~gg 112 (429)
T 1s0a_A 41 DGRRLVDGMSSWWAAIHGY-NHPQLNAAMKSQIDAMSHVMFGGITH-APAIELCRKLVAMT------PQPLECVFLADSG 112 (429)
T ss_dssp TSCEEEESSTTTTTCTTCB-SCHHHHHHHHHHHHHCSCCCCSSEEC-HHHHHHHHHHHHHS------CTTCCEEEEESSH
T ss_pred CCCEEEEcCccHhhccCCC-CCHHHHHHHHHHHHhcccccccccCC-HHHHHHHHHHHHhC------CCCCCEEEEeCCH
Confidence 3667889988874322222 579999999998865321 13332 22356666777665 3578999999999
Q ss_pred HHHHHHHHHHhc---C----CCCEEEEcCCCCcchHHHHHhC-C-------------CeEEEeeccC---CCCC-CCChh
Q 014936 110 TQAIDVAMALLS---R----PGANILLPRPGFPIYELSAAFR-H-------------IEVRHFDLLP---DKGW-EVDLD 164 (415)
Q Consensus 110 ~~al~~~~~~l~---~----~gd~vi~~~p~y~~~~~~~~~~-g-------------~~~~~~~~~~---~~~~-~~~~~ 164 (415)
+++++.+++++. + +||+|++.+|+|+++...+... | .++..++.+. ++.+ .+|++
T Consensus 113 tea~~~ai~~~~~~~~~~g~~~~~vi~~~~~yh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 192 (429)
T 1s0a_A 113 SVAVEVAMKMALQYWQAKGEARQRFLTFRNGYHGDTFGAMSVCDPDNSMHSLWKGYLPENLFAPAPQSRMDGEWDERDMV 192 (429)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCCCEEEEETTCCCCSSHHHHTTSCTTTTTGGGGTTTSCCCEEECCCCSBC-CCCCGGGGH
T ss_pred HHHHHHHHHHHHHHhcccCCCCCeEEEECCCCCCCchhhhhhcCCchhhcccccCCCCCceEeCCCcccccccchHHHHH
Confidence 999999998653 2 6899999999999865543221 1 1344444421 1123 47899
Q ss_pred HHHhhcCC--CceEEEecCC--CCcccc-CCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEE
Q 014936 165 DIESLADQ--NTVALVIINP--GNPCGN-VYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILT 239 (415)
Q Consensus 165 ~l~~~~~~--~~~~v~i~~p--~nptG~-~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~ 239 (415)
+|++++++ ....+++++| +||||. ..+.+++++|+++|+++|+++|+||+|.++...+.. ..+...+...+++
T Consensus 193 ~l~~~l~~~~~~~~~vi~~p~~~n~tG~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~g~~g~~-~~~~~~~~~~d~~- 270 (429)
T 1s0a_A 193 GFARLMAAHRHEIAAVIIEPIVQGAGGMRMYHPEWLKRIRKICDREGILLIADEIATGFGRTGKL-FACEHAEIAPDIL- 270 (429)
T ss_dssp HHHHHHHHHTTTEEEEEECSSEECTTTCEEBCTHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSS-SGGGGGTCCCSEE-
T ss_pred HHHHHHHhCCCCEEEEEEeecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCCcccchH-HHhhhcCCCCCEE-
Confidence 99988863 2344566677 589996 567888999999999999999999999976554432 1222222222333
Q ss_pred EccCccccCCCC-ceEEEEEeeCCCCCCChHHHHHHHHhh------ccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHH
Q 014936 240 LGSLSKRWIVPG-WRLGWFVTTDPCGMFRKPKVVERMKKY------FDILGDPATFIQAAVPSILQQPDEVFFKKTLNLL 312 (415)
Q Consensus 240 ~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~ 312 (415)
|+||.++ +| +|+||+++++ ++++.+... ...+.+.+++++.++.++|+...+ +...+++
T Consensus 271 --t~sK~l~-~G~~~iG~~~~~~--------~~~~~l~~~~~~~~~~~~t~~~n~~~~~a~~aal~~~~~---~~~~~~~ 336 (429)
T 1s0a_A 271 --CLGKALT-GGTMTLSATLTTR--------EVAETISNGEAGCFMHGPTFMGNPLACAAANASLAILES---GDWQQQV 336 (429)
T ss_dssp --EECGGGG-TSSSCCEEEEECH--------HHHHHHHTSTTSSCSCCCTTTTCHHHHHHHHHHHHHHHT---CHHHHHH
T ss_pred --Eeccccc-CCCccceEEEeCH--------HHHHHhhcCCCcccccCCCCCCCHHHHHHHHHHHHHHHh---CCHHHHH
Confidence 7899976 58 9999999865 677777652 123456788899888888753111 2455777
Q ss_pred HHHHHHHHHHhhcC---CCCcCCCCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEe--
Q 014936 313 KQSVDICYNKIKEI---PCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTF-- 387 (415)
Q Consensus 313 ~~~~~~l~~~l~~~---~~~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~-- 387 (415)
+++++++.+.|+++ |++. . .+..|.++|++++.. .+..++...++ ++||.+.|+ .+++||++
T Consensus 337 ~~~~~~l~~~L~~l~~~~~~~-~-~~~~g~~~~~~~~~~-----~~~~~l~~~l~-~~Gi~v~~~-----~~~iRis~~~ 403 (429)
T 1s0a_A 337 ADIEVQLREQLAPARDAEMVA-D-VRVLGAIGVVETTHP-----VNMAALQKFFV-EQGVWIRPF-----GKLIYLMPPY 403 (429)
T ss_dssp HHHHHHHHHHHGGGGGCTTEE-E-EEEETTEEEEEESSC-----BCHHHHHHHHH-HTTEECCCB-----TTEEEECCCT
T ss_pred HHHHHHHHHHHHHHhcCCCEE-E-EEEeeEEEEEEECCc-----ccHHHHHHHHH-HCCCEEecc-----CCEEEEECCC
Confidence 77888888888765 4443 2 233467888887631 14566777665 679999874 37899996
Q ss_pred eCChhhHHHHHHHHHHHHHH
Q 014936 388 AVDPYSLEECLDRIKSFYQR 407 (415)
Q Consensus 388 ~~~~~~l~~~l~~l~~~~~~ 407 (415)
..+++++++++++|++++++
T Consensus 404 ~~t~e~i~~~~~~l~~~~~~ 423 (429)
T 1s0a_A 404 IILPQQLQRLTAAVNRAVQD 423 (429)
T ss_dssp TCCHHHHHHHHHHHHHHTSS
T ss_pred CCCHHHHHHHHHHHHHHHHh
Confidence 47899999999999988654
No 133
>3nx3_A Acoat, acetylornithine aminotransferase; csgid, structural genomics, center for structural genomics O infectious diseases; 1.80A {Campylobacter jejuni subsp}
Probab=100.00 E-value=2e-31 Score=252.32 Aligned_cols=334 Identities=16% Similarity=0.132 Sum_probs=229.4
Q ss_pred cCcceeEecccCCCCCCCCC-CcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHH
Q 014936 33 NEKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQ 111 (415)
Q Consensus 33 ~~~~~i~l~~g~~~~~~~~~-~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~ 111 (415)
+++.++||+.+.+... ++ .+|.+++++.+.+....+ .|. .+..++++++++++.+..+ ++++++++|+++
T Consensus 34 ~g~~~lD~~~~~~~~~--lG~~~p~v~~a~~~~~~~~~~-~~~--~~~~~~~~~l~~~la~~~~----~~~v~~~~gg~e 104 (395)
T 3nx3_A 34 KAKKYLDFSSGIGVCA--LGYNHAKFNAKIKAQVDKLLH-TSN--LYYNENIAAAAKNLAKASA----LERVFFTNSGTE 104 (395)
T ss_dssp TCCEEEESSHHHHTCT--TCBSCHHHHHHHHHHHTTCSC-CCT--TSBCHHHHHHHHHHHHHHT----CSEEEEESSHHH
T ss_pred CCCEEEECCCcHHhcc--CCCCCHHHHHHHHHHHHhccc-ccc--ccCCHHHHHHHHHHHHhcC----CCeEEEeCCHHH
Confidence 4778999998853211 33 579999999998875322 221 1223444444444444333 689999999999
Q ss_pred HHHHHHHHhc-------CCCCEEEEcCCCCcchHHHHHhCC-------------CeEEEeeccCCCCCCCChhHHHhhcC
Q 014936 112 AIDVAMALLS-------RPGANILLPRPGFPIYELSAAFRH-------------IEVRHFDLLPDKGWEVDLDDIESLAD 171 (415)
Q Consensus 112 al~~~~~~l~-------~~gd~vi~~~p~y~~~~~~~~~~g-------------~~~~~~~~~~~~~~~~~~~~l~~~~~ 171 (415)
++..+++++. .+++.|++.+|+|+++...+...+ .++..++. .|+++|+++++
T Consensus 105 a~~~al~~~~~~~~~~g~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~~l~ 177 (395)
T 3nx3_A 105 SIEGAMKTARKYAFNKGVKGGQFIAFKHSFHGRTLGALSLTANEKYQKPFKPLISGVKFAKY-------NDISSVEKLVN 177 (395)
T ss_dssp HHHHHHHHHHHHHHHTTCTTCEEEEETTCCCCSSHHHHTTCCCHHHHGGGCSCCSCEEEECT-------TCHHHHHTTCC
T ss_pred HHHHHHHHHHHHhhccCCCCCEEEEEcCCcCCCCHHHHhhcCCcccccccCCCCCCcEEeCC-------CCHHHHHHhcc
Confidence 9999998875 357999999999998765544333 23333332 27999999998
Q ss_pred CCceEEEecCCCCccccC-CCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCC
Q 014936 172 QNTVALVIINPGNPCGNV-YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVP 250 (415)
Q Consensus 172 ~~~~~v~i~~p~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~ 250 (415)
++++++++..++|++|.+ ++.+.+++|.++|++||+++|+||+|.++...+... .....+.. ..+.|+||.++.
T Consensus 178 ~~~~~v~~~~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~Dev~~~~g~~g~~~-~~~~~~~~---~d~~t~sK~~~~- 252 (395)
T 3nx3_A 178 EKTCAIILESVQGEGGINPANKDFYKALRKLCDEKDILLIADEIQCGMGRSGKFF-AYEHAQIL---PDIMTSAKALGC- 252 (395)
T ss_dssp TTEEEEEEESEECTTSCEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSS-GGGGGTCC---CSEEEECGGGTT-
T ss_pred CCeEEEEEeCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEecccCCCcCCcch-hHHhcCCC---CCEEEecccccC-
Confidence 888877777777777766 788889999999999999999999999876544321 12222222 223478999875
Q ss_pred CceEEEEEeeCCCCCCChHHH-HHHHHhhc-cccCCchhHHHHHHHHhhCCCc-HHHHHHHHHHHHHHHHHHHHHhhcCC
Q 014936 251 GWRLGWFVTTDPCGMFRKPKV-VERMKKYF-DILGDPATFIQAAVPSILQQPD-EVFFKKTLNLLKQSVDICYNKIKEIP 327 (415)
Q Consensus 251 G~r~G~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~a~~~~l~~~~-~~~~~~~~~~~~~~~~~l~~~l~~~~ 327 (415)
|+|+||+++++ ++ ++.+.... ..++..+++++.++.++|+... +++.++..+..+..++.+.+.+.++|
T Consensus 253 G~~~G~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~aa~aal~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 324 (395)
T 3nx3_A 253 GLSVGAFVINQ--------KVASNSLEAGDHGSTYGGNPLVCAGVNAVFEIFKEEKILENVNKLTPYLEQSLDELINEFD 324 (395)
T ss_dssp TSCCEEEEECH--------HHHHHHSCTTCCSSCBSCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCT
T ss_pred CCceEEEEEch--------hhhhhhcCCcccCCCCCCCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 89999999865 56 66665542 2356778899988888886321 13333444444444444444444455
Q ss_pred CCcCCCCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEe--eCChhhHHHHHHHHHHHH
Q 014936 328 CISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTF--AVDPYSLEECLDRIKSFY 405 (415)
Q Consensus 328 ~~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~--~~~~~~l~~~l~~l~~~~ 405 (415)
.+. . .+..|.++|+.++.. .+..++...+ .++||.+.|+. .+++||++ ..+++++++++++|++++
T Consensus 325 ~~~-~-~~~~g~~~~~~~~~~-----~~~~~~~~~l-~~~Gi~v~~~~----~~~iRi~~~~~~t~e~i~~~l~~l~~~l 392 (395)
T 3nx3_A 325 FCK-K-RKGLGFMQGLSLDKS-----VKVAKVIQKC-QENALLLISCG----ENDLRFLPPLILQKEHIDEMSEKLRKAL 392 (395)
T ss_dssp TEE-E-EEEETTEEEEEECTT-----SCHHHHHHHH-HHTTEECEEET----TTEEEECCCTTCCHHHHHHHHHHHHHHH
T ss_pred CeE-E-EEeEEEEEEEEeCCc-----chHHHHHHHH-HHCCCEEecCC----CCEEEEECCCCCCHHHHHHHHHHHHHHH
Confidence 444 2 345577888888642 2456666665 56799999875 58999987 468999999999999887
Q ss_pred HH
Q 014936 406 QR 407 (415)
Q Consensus 406 ~~ 407 (415)
++
T Consensus 393 ~~ 394 (395)
T 3nx3_A 393 KS 394 (395)
T ss_dssp HT
T ss_pred Hh
Confidence 53
No 134
>4ffc_A 4-aminobutyrate aminotransferase (GABT); structural genomics, niaid, national institute of allergy AN infectious diseases; HET: LLP; 1.80A {Mycobacterium abscessus}
Probab=100.00 E-value=6.9e-32 Score=259.51 Aligned_cols=355 Identities=14% Similarity=0.048 Sum_probs=234.2
Q ss_pred cCcceeEecccCCCCCCCCC-CcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHH
Q 014936 33 NEKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQ 111 (415)
Q Consensus 33 ~~~~~i~l~~g~~~~~~~~~-~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~ 111 (415)
+++.++||..|..... ++ .+|.+++++.+++.... .|....+..+.++++++++.+..+.. ..+++++|+|+++
T Consensus 62 ~G~~ylD~~~~~~~~~--lGh~~p~v~~A~~~~~~~~~--~~~~~~~~~~~~~~la~~l~~~~~~~-~~~~v~~~~sGse 136 (453)
T 4ffc_A 62 DGNSFIDLGAGIAVTT--VGASHPAVAAAIADQATHFT--HTCFMVTPYEQYVQVAELLNALTPGD-HDKRTALFNSGAE 136 (453)
T ss_dssp TSCEEEESSHHHHTCT--TCTTCHHHHHHHHHHHHHCS--CCTTTTSCCHHHHHHHHHHHHHSSCS-SCEEEEEESSHHH
T ss_pred CCCEEEEcCCCcccCc--CCCCCHHHHHHHHHHHHhcc--ccccCcCCCHHHHHHHHHHHHhCCCC-CCcEEEEeCcHHH
Confidence 4677899988853211 33 48999999999887543 34433344566666666666655411 3579999999999
Q ss_pred HHHHHHHHhcC--CCCEEEEcCCCCcchHHHHHhCCC--------------eEEEeeccC--CCCCCCC--------hhH
Q 014936 112 AIDVAMALLSR--PGANILLPRPGFPIYELSAAFRHI--------------EVRHFDLLP--DKGWEVD--------LDD 165 (415)
Q Consensus 112 al~~~~~~l~~--~gd~vi~~~p~y~~~~~~~~~~g~--------------~~~~~~~~~--~~~~~~~--------~~~ 165 (415)
|++.+++.+.. .++.|++.+++|+++...+...+. .+..++... .+.++.+ ++.
T Consensus 137 A~~~alk~a~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 216 (453)
T 4ffc_A 137 AVENAIKVARLATGRPAVVAFDNAYHGRTNLTMALTAKSMPYKSQFGPFAPEVYRMPASYPLRDEPGLTGEEAARRAISR 216 (453)
T ss_dssp HHHHHHHHHHHHHCCCEEEEETTCCCCSSHHHHHHCCCCTTTTTTSCSCCSSEEEECCCCTTTSCTTCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCEEEEEcCccCCcchHHHhhcCCCcccccCCCCCCCCcEEeCCCccccCccccchHHHHHHHHHH
Confidence 99999987652 458999999999987766544322 344444421 1112222 456
Q ss_pred HHhhcCCCceEEEecCCCCccc--cCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccC
Q 014936 166 IESLADQNTVALVIINPGNPCG--NVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSL 243 (415)
Q Consensus 166 l~~~~~~~~~~v~i~~p~nptG--~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~ 243 (415)
|++.+.+.+.++++++|.|++| ...+.+.+++|.++|++||+++|+||+|.++.+.+.. .....++.. ..+.+|
T Consensus 217 l~~~i~~~~~aavi~ep~~~~gG~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~g~~g~~-~a~~~~~~~---pdi~t~ 292 (453)
T 4ffc_A 217 IETQIGAQSLAAIIIEPIQGEGGFIVPAPGFLATLTAWASENGVVFIADEVQTGFARTGAW-FASEHEGIV---PDIVTM 292 (453)
T ss_dssp HHHHTCGGGEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSS-STHHHHTCC---CSEEEE
T ss_pred HHHhcCCCCEEEEEEcCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEecCccCCCccccc-chhhhcCCC---cchHhh
Confidence 6776766778889999988776 4558888999999999999999999999987655532 122222222 223478
Q ss_pred ccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhhc-cccCCchhHHHHHHHHhhCCCcH-HHHHHHHHHHHHHHHHHHH
Q 014936 244 SKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYF-DILGDPATFIQAAVPSILQQPDE-VFFKKTLNLLKQSVDICYN 321 (415)
Q Consensus 244 sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~a~~~~l~~~~~-~~~~~~~~~~~~~~~~l~~ 321 (415)
||.+++ |+|+||+++++ ++++.+.... ..+++.+++++.++.++|+...+ +..++..+..+..++.+.+
T Consensus 293 sK~~~~-G~~~G~~~~~~--------~i~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~l~~ 363 (453)
T 4ffc_A 293 AKGIAG-GMPLSAVTGRA--------ELMDAVYAGGLGGTYGGNPVTCAAAVAALGVMRELDLPARARAIEASVTSRLSA 363 (453)
T ss_dssp CGGGGT-TSSCEEEEEEH--------HHHTTSCTTSSCCSSSSCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHH
T ss_pred hhhhcC-CcCeEEEEECH--------HHHhhhcccCcCCCCCcCHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHH
Confidence 999866 89999999865 5766665442 34567889999999888864211 2233333333334444444
Q ss_pred HhhcCCCCcCCCCCCCceEEEEecCcccc--CCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEe--eCChhhHHHH
Q 014936 322 KIKEIPCISCPHKPEGSMAVMLKLNLSLL--DDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTF--AVDPYSLEEC 397 (415)
Q Consensus 322 ~l~~~~~~~~~~~p~~g~~~~~~l~~~~~--~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~--~~~~~~l~~~ 397 (415)
.+.++|.+. . .+..|.++|+.+..... +......++...+ .++||.+.|+..++ +++|+++ ..++++++++
T Consensus 364 ~~~~~~~~~-~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~Gv~v~~~~~~~--~~iRi~~~~~~t~e~i~~~ 438 (453)
T 4ffc_A 364 LAEEVDIIG-E-VRGRGAMLAIEIVKPGTLEPDAALTKSIAAEA-LSQGVLILTCGTFG--NVIRLLPPLVIGDDLLDEG 438 (453)
T ss_dssp HHHHCSSEE-E-EEEETTEEEEEEBCTTSCCBCHHHHHHHHHHH-HHTTEECCEECTTS--CEEEECCCTTCCHHHHHHH
T ss_pred HHhhCCCeE-E-EEeeceEEEEEEecCcccCCCHHHHHHHHHHH-HhCCCEEecCCCCC--CEEEEECCCCCCHHHHHHH
Confidence 444555444 2 34557788887742100 0001234555555 56799999976543 7899987 4689999999
Q ss_pred HHHHHHHHHHHHH
Q 014936 398 LDRIKSFYQRHAK 410 (415)
Q Consensus 398 l~~l~~~~~~~~~ 410 (415)
+++|+++++++.+
T Consensus 439 l~~l~~~l~~~~~ 451 (453)
T 4ffc_A 439 ITALSDIIRAKAS 451 (453)
T ss_dssp HHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHHh
Confidence 9999999987543
No 135
>2rfv_A Methionine gamma-lyase; pyridoxal-5'-phosphate, PLP-dependent enzyme; HET: LLP; 1.35A {Citrobacter freundii} PDB: 1y4i_A* 3jwa_A* 3jw9_A* 3jwb_A* 3mkj_A*
Probab=100.00 E-value=2.3e-30 Score=245.17 Aligned_cols=317 Identities=13% Similarity=0.118 Sum_probs=218.0
Q ss_pred EecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCC--CCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHH
Q 014936 39 SLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYA--PTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVA 116 (415)
Q Consensus 39 ~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~--~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~ 116 (415)
+++.++|+........+++.+++...........|+ +.....++++.++++++ . ++.+++++|++++..+
T Consensus 24 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g------~--~~~i~~~sG~~a~~~~ 95 (398)
T 2rfv_A 24 TGALSTPIFQTSTFVFDSAEQGAARFALEESGYIYTRLGNPTTDALEKKLAVLER------G--EAGLATASGISAITTT 95 (398)
T ss_dssp TCCSSCCCCCCSBCCCSSHHHHHHHC-----CCSBTTTCCHHHHHHHHHHHHHHT------C--SEEEEESSHHHHHHHH
T ss_pred CCCcCCCCcCCCccccCCHHHHHHhhcCCCCCCceeCCCChHHHHHHHHHHHHhC------C--CcEEEECCHHHHHHHH
Confidence 577777764433344555666554211111222333 33456788888888872 2 3666677778999999
Q ss_pred HHHhcCCCCEEEEcCCCCcchHHHH----HhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCH
Q 014936 117 MALLSRPGANILLPRPGFPIYELSA----AFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSY 192 (415)
Q Consensus 117 ~~~l~~~gd~vi~~~p~y~~~~~~~----~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~ 192 (415)
+.++.++||+|+++.|+|+++...+ ...|.++..++.+ |++++++.++++++++++++|+||||.+++
T Consensus 96 l~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-------d~~~l~~~i~~~~~~v~~~~~~nptG~~~~- 167 (398)
T 2rfv_A 96 LLTLCQQGDHIVSASAIYGCTHAFLSHSMPKFGINVRFVDAA-------KPEEIRAAMRPETKVVYIETPANPTLSLVD- 167 (398)
T ss_dssp HHHHCCTTCEEEEESSSCHHHHHHHHTHHHHTTCEEEEECTT-------SHHHHHHHCCTTEEEEEEESSBTTTTBCCC-
T ss_pred HHHHhCCCCEEEEcCCCcccHHHHHHHHHHHcCCEEEEeCCC-------CHHHHHHhcCCCCeEEEEECCCCCCCcccC-
Confidence 9999999999999999999887766 7889999888752 799999999889999999999999999986
Q ss_pred HHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceE-EEEEeeCCCCCCChHHH
Q 014936 193 QHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRL-GWFVTTDPCGMFRKPKV 271 (415)
Q Consensus 193 ~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~-G~~~~~~~~~~~~~~~~ 271 (415)
+++|+++|+++|+++|+||+|+.+.+.. ++ .++ ..+++.|+||.++++|+|+ ||+++++ ++
T Consensus 168 --l~~i~~l~~~~~~~li~De~~~~~~~~~----~~-~~~---~di~~~s~sK~~~~~g~~~~G~~~~~~--------~~ 229 (398)
T 2rfv_A 168 --IETVAGIAHQQGALLVVDNTFMSPYCQQ----PL-QLG---ADIVVHSVTKYINGHGDVIGGIIVGKQ--------EF 229 (398)
T ss_dssp --HHHHHHHHHHTTCEEEEECTTTCTTTCC----GG-GGT---CSEEEEETTTTTTCSSCCCCEEEEECH--------HH
T ss_pred --HHHHHHHHHHcCCEEEEECCCcccccCC----ch-hhC---CcEEEEeCcccccCCCCceEEEEEECH--------HH
Confidence 8888999999999999999999766431 22 222 3588999999999999998 9999865 45
Q ss_pred HH-HHHhhcc-c-cCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCC--------------CCcCCCC
Q 014936 272 VE-RMKKYFD-I-LGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIP--------------CISCPHK 334 (415)
Q Consensus 272 ~~-~~~~~~~-~-~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~--------------~~~~~~~ 334 (415)
++ .++.... . +.+.+++.+.++.+.++. +..+.+++.++.+.+.+.|++.+ ++.+. .
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-----~~~~~~~~~~~~~~l~~~l~~~~~v~~~~~~~L~~~p~~~~~-~ 303 (398)
T 2rfv_A 230 IDQARFVGLKDITGGCMSPFNAWLTLRGVKT-----LGIRMERHCENALKIARFLEGHPSITRVYYPGLSSHPQYELG-Q 303 (398)
T ss_dssp HHHHHHTHHHHTTCCCCCHHHHHHHHHHHTT-----HHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTSTTHHHH-H
T ss_pred HHHHHHHHHHhCCCCCCCHHHHHHHHhhhhh-----HHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHH-H
Confidence 55 5554432 2 356788888888888865 33344455556666666666532 22211 1
Q ss_pred C---CCceEEEEecCccccCCCCCHHHHHHHHHhh---cCeEEEcCCCCC----------------------C-CCeEEE
Q 014936 335 P---EGSMAVMLKLNLSLLDDIIDDIDFCFKLAKE---ESVIILPGTAVG----------------------L-KNWLRV 385 (415)
Q Consensus 335 p---~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~---~gi~v~~g~~~~----------------------~-~~~iRi 385 (415)
| ..|.+++++++. ..+....++.+ .|+.+++|..+. . ++.+|+
T Consensus 304 ~~~~~~g~~~~~~~~~--------~~~~~~~l~~~~~~~~i~~~~G~~~~li~~~~~~~~~~~~~~~~~~~g~~~~~iRl 375 (398)
T 2rfv_A 304 RQMSLPGGIISFEIAG--------GLEAGRRMINSVELCLLAVSLGDTETLIQHPASMTHSPVAPEERLKAGITDGLIRL 375 (398)
T ss_dssp HHCSSCCSEEEEEETT--------HHHHHHHHHTTCSSSEECSCCSSSSCEEECHHHHTSSSSCHHHHHHTTCCTTEEEE
T ss_pred hhCCCCceEEEEEEcC--------CHHHHHHHHHhCCcceeccCCCCcceeeecccccccccCCHHHHHhcCCCCCeEEE
Confidence 1 245666667752 12223334444 378888886531 1 579999
Q ss_pred EeeC--ChhhHHHHHHHHHH
Q 014936 386 TFAV--DPYSLEECLDRIKS 403 (415)
Q Consensus 386 ~~~~--~~~~l~~~l~~l~~ 403 (415)
|++. ++++++.+++.|++
T Consensus 376 s~~~~~~~~~i~~l~~al~~ 395 (398)
T 2rfv_A 376 SVGLEDPEDIINDLEHAIRK 395 (398)
T ss_dssp ECCSSCHHHHHHHHHHHHHH
T ss_pred EecCCCHHHHHHHHHHHHHh
Confidence 9964 45566555555543
No 136
>3dxv_A Alpha-amino-epsilon-caprolactam racemase; fold-TYPE1, pyridoxal-5'-phosphate dependent racemase, pyrid phosphate, isomerase; HET: PLP; 2.21A {Achromobacter obae} PDB: 2zuk_A* 3dxw_A*
Probab=100.00 E-value=2.2e-31 Score=255.64 Aligned_cols=347 Identities=14% Similarity=0.087 Sum_probs=231.3
Q ss_pred cCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCC-CcEEEeCChHH
Q 014936 33 NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTP-NDVFVTSGCTQ 111 (415)
Q Consensus 33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~-~~i~i~~g~~~ 111 (415)
+++.++||+.+.+....+. .+|.+.+++.+.+... ..|+...+..++++++++++.+..+. .. +++++++|+++
T Consensus 41 ~g~~~lD~~~~~~~~~lG~-~~p~v~~a~~~~~~~~--~~~~~~~~~~~~~~~l~~~la~~~~~--~~~~~v~~~~ggse 115 (439)
T 3dxv_A 41 NGRELIDLSGAWGAASLGY-GHPAIVAAVSAAAANP--AGATILSASNAPAVTLAERLLASFPG--EGTHKIWFGHSGSD 115 (439)
T ss_dssp TSCEEEESSTTTTTCTTCB-SCHHHHHHHHHHHHSC--SCSCSSSSEEHHHHHHHHHHHHTTTC--TTTEEEEEESSHHH
T ss_pred CCCEEEECCCchhhccCCC-CCHHHHHHHHHHHHhc--cCccccccCCHHHHHHHHHHHHhCCC--CCCCEEEEeCCHHH
Confidence 4778999999986432222 6899999999988754 24544456667888888888776542 33 79999999999
Q ss_pred HHHHHHHHh--cCCCCEEEEcCCCCcchHHHHHhCCCe-E--------------EEeeccCCCCCCC-----ChhHHHhh
Q 014936 112 AIDVAMALL--SRPGANILLPRPGFPIYELSAAFRHIE-V--------------RHFDLLPDKGWEV-----DLDDIESL 169 (415)
Q Consensus 112 al~~~~~~l--~~~gd~vi~~~p~y~~~~~~~~~~g~~-~--------------~~~~~~~~~~~~~-----~~~~l~~~ 169 (415)
++..+++++ ..+++.|++.+++|++....+...+.. . ..++.+ +.+.. |+++|+++
T Consensus 116 a~~~al~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~d~~~le~~ 193 (439)
T 3dxv_A 116 ANEAAYRAIVKATGRSGVIAFAGAYHGCTVGSMAFSGHSVQADAAKADGLILLPYPDPYR--PYRNDPTGDAILTLLTEK 193 (439)
T ss_dssp HHHHHHHHHHHHHSCCEEEEETTCCCCSSHHHHCC-------------CEEEECCCCSSS--CBTTBTTSHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCEEEEECCCCCCCcHHHHhhcCCCchhhccccCCCCCCcEEcCCC--cccccccHHHHHHHHHHH
Confidence 999999985 235678999999998766655444322 1 122221 11111 68999998
Q ss_pred c----CCCceEEEecCCCCccccCC-CHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCc
Q 014936 170 A----DQNTVALVIINPGNPCGNVY-SYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLS 244 (415)
Q Consensus 170 ~----~~~~~~v~i~~p~nptG~~~-~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~s 244 (415)
+ .++++++++..++|++|.+. +.+.+++|.++|++||+++|+||+|.++...+.. .....++...+++ |||
T Consensus 194 l~~~~~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DE~~~g~g~~g~~-~~~~~~~~~~di~---s~s 269 (439)
T 3dxv_A 194 LAAVPAGSIGAAFIEPIQSDGGLIVPPDGFLRKFADICRAHGILVVCDEVKVGLARSGRL-HCFEHEGFVPDIL---VLG 269 (439)
T ss_dssp HHTSCTTCEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTCTTTTSSS-SGGGGTTCCCSEE---EEC
T ss_pred HHhcCCCCEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCchh-hHHHhcCCCCCEE---EEc
Confidence 8 44566666666677888765 5555999999999999999999999976555432 1222223222333 899
Q ss_pred cccCCCCceEEEEEeeCCCCCCChHHHHHHHHhhc-cccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHh
Q 014936 245 KRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYF-DILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKI 323 (415)
Q Consensus 245 K~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l 323 (415)
|+++ +|+|+||+++++ ++++.+.... ..++ .+++++.++.++|+...+ ++..++++++++.+.+.|
T Consensus 270 K~~~-~G~riG~~~~~~--------~~~~~~~~~~~~~t~-~~~~~~~aa~aal~~~~~---~~~~~~~~~~~~~~~~~l 336 (439)
T 3dxv_A 270 KGLG-GGLPLSAVIAPA--------EILDCASAFAMQTLH-GNPISAAAGLAVLETIDR---DDLPAMAERKGRLLRDGL 336 (439)
T ss_dssp GGGG-TTSCCEEEEEEH--------HHHTSCSSSSCCTTT-TCHHHHHHHHHHHHHHHH---TTHHHHHHHHHHHHHHHH
T ss_pred chhc-CCcceEEEEECH--------HHHhhhcCCCcCCCc-ccHHHHHHHHHHHHHHHh---cCHHHHHHHHHHHHHHHH
Confidence 9987 599999999975 5666665442 2345 788888888888764211 234445555555555555
Q ss_pred h----cCCCCcCCCCCCCceEEEEecCcccc---CCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEe--eCChhhH
Q 014936 324 K----EIPCISCPHKPEGSMAVMLKLNLSLL---DDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTF--AVDPYSL 394 (415)
Q Consensus 324 ~----~~~~~~~~~~p~~g~~~~~~l~~~~~---~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~--~~~~~~l 394 (415)
+ .++.+. . .+..|.|+++.+..... +......++...++ ++||.+.|+..+ .+++||++ ..+++++
T Consensus 337 ~~~~~~~~~~~-~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~~~~--~~~iRi~~~~~~t~e~i 411 (439)
T 3dxv_A 337 SELAKRHPLIG-D-IRGRGLACGMELVCDRQSREPARAETAKLIYRAY-QLGLVVYYVGMN--GNVLEFTPPLTITETDI 411 (439)
T ss_dssp HHHHHHCTTEE-E-EEEETTEEEEEEEEETTTTEECHHHHHHHHHHHH-HHTEECEEESTT--SCEEEECCCTTCCHHHH
T ss_pred HHHHHhCCCeE-E-EEEEEEEEEEEEecCccccCCCHHHHHHHHHHHH-HCCcEEeecCCC--CCEEEEECCCCCCHHHH
Confidence 4 344444 2 34567788877632100 00012445666665 559999998543 48999987 4689999
Q ss_pred HHHHHHHHHHHHHH
Q 014936 395 EECLDRIKSFYQRH 408 (415)
Q Consensus 395 ~~~l~~l~~~~~~~ 408 (415)
++++++|+++++++
T Consensus 412 ~~~l~~l~~~l~~~ 425 (439)
T 3dxv_A 412 HKALDLLDRAFSEL 425 (439)
T ss_dssp HHHHHHHHHHHHTG
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999998765
No 137
>2po3_A 4-dehydrase; external aldimine, PLP, aminotransferase, TDP-sugar; HET: T4K; 2.10A {Streptomyces venezuelae}
Probab=99.98 E-value=6.8e-30 Score=244.06 Aligned_cols=332 Identities=14% Similarity=0.122 Sum_probs=238.7
Q ss_pred cCccee--EecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCC-CCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCCh
Q 014936 33 NEKKVI--SLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAP-TAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGC 109 (415)
Q Consensus 33 ~~~~~i--~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~-~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~ 109 (415)
++.+++ +|+.|.|+ +++++.+++++.+.+..+ .|++ ..+..++|+.++++++ .+++++|+|+
T Consensus 12 gg~~~~~~~l~~~~p~----~~~p~~~~~a~~~~~~~~---~y~~~~~~~~~l~~~la~~~~--------~~~v~~~~gg 76 (424)
T 2po3_A 12 GGPAAFDQPLLVGRPN----RIDRARLYERLDRALDSQ---WLSNGGPLVREFEERVAGLAG--------VRHAVATCNA 76 (424)
T ss_dssp TCCCSCSSCEETTCCC----CCCHHHHHHHHHHHHHHT---CCSSSCHHHHHHHHHHHHHHT--------SSEEEEESCH
T ss_pred cCCccccccccccCCC----CCChHHHHHHHHHHHhcC---CcccCCHHHHHHHHHHHHHhC--------CCeEEEeCCH
Confidence 345554 68888865 666789999999888653 4776 6788999999999993 3699999999
Q ss_pred HHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccC
Q 014936 110 TQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNV 189 (415)
Q Consensus 110 ~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~ 189 (415)
++++.+++.++. +||+|+++.|+|+.+...+...|++++.+++++ +++.+|+++|++.+++++++|++++ |||..
T Consensus 77 t~al~~~l~~l~-~gd~Vlv~~~~~~~~~~~~~~~G~~~~~v~~~~-~~~~~d~~~l~~~i~~~~~~v~~~~---~tG~~ 151 (424)
T 2po3_A 77 TAGLQLLAHAAG-LTGEVIMPSMTFAATPHALRWIGLTPVFADIDP-DTGNLDPDQVAAAVTPRTSAVVGVH---LWGRP 151 (424)
T ss_dssp HHHHHHHHHHHT-CCSEEEEESSSCTHHHHHHHHTTCEEEEECBCT-TTSSBCHHHHGGGCCTTEEEEEEEC---GGGCC
T ss_pred HHHHHHHHHHcC-CCCEEEECCCccHHHHHHHHHcCCEEEEEecCC-CcCCcCHHHHHHhhCcCCcEEEEEC---CCCCc
Confidence 999999999985 789999999999999999999999999999864 3567899999999988888888754 89987
Q ss_pred CCHHHHHHHHHHHhhcCcEEEEccccCC-cccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCCh
Q 014936 190 YSYQHLQKLAETANKLKTLVIADEVYGH-LVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRK 268 (415)
Q Consensus 190 ~~~~~l~~i~~~~~~~~~~li~De~~~~-~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~ 268 (415)
.++++|+++|+++|+++|+|++|+. +.+++. ++..+. + +++.||||.++++|+|+||+++++
T Consensus 152 ---~~l~~i~~la~~~~~~li~Dea~~~g~~~~~~---~~~~~~---d-i~~~S~sk~K~l~~~~~G~~v~~~------- 214 (424)
T 2po3_A 152 ---CAADQLRKVADEHGLRLYFDAAHALGCAVDGR---PAGSLG---D-AEVFSFHATKAVNAFEGGAVVTDD------- 214 (424)
T ss_dssp ---CCHHHHHHHHHHTTCEEEEECTTCTTCEETTE---ETTSSS---S-EEEEECCTTSSSCCSSCEEEEESC-------
T ss_pred ---CCHHHHHHHHHHcCCEEEEECccccCCeECCe---eccccc---C-EEEEeCCCCCCccCCCCeEEEeCC-------
Confidence 6788999999999999999999994 555442 222222 2 888999966667779999999863
Q ss_pred HHHHHHHHhhccccC-------------CchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCC
Q 014936 269 PKVVERMKKYFDILG-------------DPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKP 335 (415)
Q Consensus 269 ~~~~~~~~~~~~~~~-------------~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p 335 (415)
+++++.+........ ..++....++... .+.+++..++.+++++++.+.|++++++.+...|
T Consensus 215 ~~l~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~l~~-----~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~ 289 (424)
T 2po3_A 215 ADLAARIRALHNFGFDLPGGSPAGGTNAKMSEAAAAMGLTS-----LDAFPEVIDRNRRNHAAYREHLADLPGVLVADHD 289 (424)
T ss_dssp HHHHHHHHHHHBTTTTCTTCCTTCCCBCCCCHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHTCSCTTEEECCGG
T ss_pred HHHHHHHHHHHhcCccccccccccCcCCCcCHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHhccCCCccccCCC
Confidence 257776665432110 1122222222211 2456777888888889999999988787733223
Q ss_pred CCc----eEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCC--------------CCC-------eEEEEe--e
Q 014936 336 EGS----MAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVG--------------LKN-------WLRVTF--A 388 (415)
Q Consensus 336 ~~g----~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~--------------~~~-------~iRi~~--~ 388 (415)
.++ .++++.++.... + .+..++... |.++||.+.+..... .++ .||+++ .
T Consensus 290 ~~~~~~~~~~~i~~~~~~~-~-~~~~~l~~~-L~~~gI~v~~~~~~~~~~~~~~~~~g~~~~~~~~r~~~~~l~l~~~~~ 366 (424)
T 2po3_A 290 RHGLNNHQYVIVEIDEATT-G-IHRDLVMEV-LKAEGVHTRAYFSPGCHELEPYRGQPHAPLPHTERLAARVLSLPTGTA 366 (424)
T ss_dssp GGSCCCCCCEEEEECHHHH-S-SCHHHHHHH-HHHTTEECBCTTCSCGGGSTTTTTSCCCCCHHHHHHHTTEEEECCSTT
T ss_pred CCCccccEEEEEEECCccc-h-hhHHHHHHH-HHHCCCceecccCCccccchhhhhcCCCCChhHHHHhcCEEEeeCCCC
Confidence 333 234455542000 1 145556554 467899998721100 011 277774 4
Q ss_pred CChhhHHHHHHHHHHHHHHHH
Q 014936 389 VDPYSLEECLDRIKSFYQRHA 409 (415)
Q Consensus 389 ~~~~~l~~~l~~l~~~~~~~~ 409 (415)
.++++++.+++.|++++++..
T Consensus 367 ~t~e~i~~~~~~L~~~~~~~~ 387 (424)
T 2po3_A 367 IGDDDIRRVADLLRLCATRGR 387 (424)
T ss_dssp CCHHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHhhhH
Confidence 689999999999999887643
No 138
>2oga_A Transaminase; PLP-dependent enzyme, desosamine, deoxysugars, antibiotics, hydrolase; HET: PGU; 2.05A {Streptomyces venezuelae} PDB: 2oge_A*
Probab=99.98 E-value=6.6e-31 Score=249.04 Aligned_cols=324 Identities=16% Similarity=0.152 Sum_probs=240.7
Q ss_pred cceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHH
Q 014936 35 KKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAID 114 (415)
Q Consensus 35 ~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~ 114 (415)
.+++||+.|.|. + ++.+++++.+.+... .|.+..+..++|+.++++++ .+++++++||++++.
T Consensus 30 ~~~id~~~~~~~----~--~~~v~~a~~~~~~~~---~y~~~~~~~~l~~~la~~~~--------~~~~v~~~~Gt~a~~ 92 (399)
T 2oga_A 30 VPFLDLKAAYEE----L--RAETDAAIARVLDSG---RYLLGPELEGFEAEFAAYCE--------TDHAVGVNSGMDALQ 92 (399)
T ss_dssp BCSCCHHHHHHH----T--HHHHHHHHHHHHHHT---CCSSSHHHHHHHHHHHHHTT--------SSEEEEESCHHHHHH
T ss_pred CcccccCcCCCC----C--CHHHHHHHHHHHhcC---CCCCchhHHHHHHHHHHHHC--------CCeEEEecCHHHHHH
Confidence 578999999753 2 388999999887642 46555678999999999983 236788888899999
Q ss_pred HHHHHh-cCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHH
Q 014936 115 VAMALL-SRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQ 193 (415)
Q Consensus 115 ~~~~~l-~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~ 193 (415)
.++.++ .++||+|+++.|+|+.+...++..|.+++.++.++ +++.+|++++++.+++++++|+ |+||||.+.+
T Consensus 93 ~~l~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~d~~~l~~~i~~~~~~v~---~~n~tG~~~~-- 166 (399)
T 2oga_A 93 LALRGLGIGPGDEVIVPSHTYIASWLAVSATGATPVPVEPHE-DHPTLDPLLVEKAITPRTRALL---PVHLYGHPAD-- 166 (399)
T ss_dssp HHHHHTTCCTTCEEEEESSSCTHHHHHHHHTTCEEEEECBCS-SSSSBCHHHHHHHCCTTEEEEC---CBCGGGCCCC--
T ss_pred HHHHHhCCCCcCEEEECCCccHHHHHHHHHCCCEEEEEecCC-CCCCcCHHHHHHhcCCCCeEEE---EeCCcCCccC--
Confidence 999999 89999999999999999999999999999998764 3467999999999988777665 5789999855
Q ss_pred HHHHHHHHHhhcCcEEEEccccCCcc-cCCCCcccccccCCCCCeEEEccC--ccccCCCCceEEEEEeeCCCCCCChHH
Q 014936 194 HLQKLAETANKLKTLVIADEVYGHLV-FGDKPFVPMGVFGSTVPILTLGSL--SKRWIVPGWRLGWFVTTDPCGMFRKPK 270 (415)
Q Consensus 194 ~l~~i~~~~~~~~~~li~De~~~~~~-~~~~~~~~~~~~~~~~~~i~~~s~--sK~~~~~G~r~G~~~~~~~~~~~~~~~ 270 (415)
+++|.++|+++|+++|+|++|+.+. +++. .+..+. .+++.|+ ||.++.+| |+||+++++ ++
T Consensus 167 -l~~i~~l~~~~~~~li~Dea~~~g~~~~~~---~~~~~~----di~~~S~~~sK~~~~~G-~~g~~~~~~-------~~ 230 (399)
T 2oga_A 167 -MDALRELADRHGLHIVEDAAQAHGARYRGR---RIGAGS----SVAAFSFYPGKNLGCFG-DGGAVVTGD-------PE 230 (399)
T ss_dssp -HHHHHHHHHHHTCEECEECTTCTTCEETTE---ETTCTT----CEEEEECCTTSSSCCSS-CCEEEEESC-------HH
T ss_pred -HHHHHHHHHHcCCEEEEECcccccCccCCe---eccccc----CEEEEeCCCCccCCcCC-ceEEEEeCC-------HH
Confidence 7888889999999999999998753 3222 121121 2778888 79988878 999999864 25
Q ss_pred HHHHHHhhccc-------------cCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCC
Q 014936 271 VVERMKKYFDI-------------LGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEG 337 (415)
Q Consensus 271 ~~~~~~~~~~~-------------~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~ 337 (415)
+++.++..... ++..+++.+.++...++. ++...++.+++++++.+.|++++++.....|..
T Consensus 231 ~~~~l~~~~~~g~~~~~~~~~~g~~~~~~~~~~a~~~~~l~~-----~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~ 305 (399)
T 2oga_A 231 LAERLRMLRNYGSRQKYSHETKGTNSRLDEMQAAVLRIRLAH-----LDSWNGRRSALAAEYLSGLAGLPGIGLPVTAPD 305 (399)
T ss_dssp HHHHHHHHHBTTCSSTTCCCSCCCBCCCCHHHHHHHHHHHHT-----HHHHHHHHHHHHHHHHHHTTTCTTCBCCCCCTT
T ss_pred HHHHHHHHHhcCccccccccccccCCCcCHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHhccCCCccccCCCCC
Confidence 76666554221 124466666666666653 455666777788889999998888774334556
Q ss_pred ceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCC-----------CC------------CCeEEEEee--CChh
Q 014936 338 SMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAV-----------GL------------KNWLRVTFA--VDPY 392 (415)
Q Consensus 338 g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~-----------~~------------~~~iRi~~~--~~~~ 392 (415)
+.++|+.++... .+..++...+ .++||.+.++... +. .+++||++. .+++
T Consensus 306 ~~~~~~~~~~~~----~~~~~l~~~L-~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~lRi~~~~~~t~e 380 (399)
T 2oga_A 306 TDPVWHLFTVRT----ERRDELRSHL-DARGIDTLTHYPVPVHLSPAYAGEAPPEGSLPRAESFARQVLSLPIGPHLERP 380 (399)
T ss_dssp EECCCSSEEEEC----SSHHHHHHHH-HHTTBCCBCSCSSCGGGSHHHHTTSCCTTSCHHHHHHHHHEEEECCSTTCCHH
T ss_pred CcceeEEEEEEC----CCHHHHHHHH-HHCCCceecCCCCccccchhhcccCCCCCCChhHHHHHhCEEEccCCCCCCHH
Confidence 666653332210 1455666665 5679999875321 00 157999994 6899
Q ss_pred hHHHHHHHHHHHHHH
Q 014936 393 SLEECLDRIKSFYQR 407 (415)
Q Consensus 393 ~l~~~l~~l~~~~~~ 407 (415)
+++.+++.|++++++
T Consensus 381 di~~~~~~l~~~~~~ 395 (399)
T 2oga_A 381 QALRVIDAVREWAER 395 (399)
T ss_dssp HHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHH
Confidence 999999999988764
No 139
>4a6r_A Omega transaminase; transferase, PLP-binding enzyme, transaminase fold type I; HET: TA8; 1.35A {Chromobacterium violaceum} PDB: 4a6t_A* 4a6u_A 4a72_A* 4ah3_A*
Probab=99.98 E-value=7.5e-31 Score=253.03 Aligned_cols=354 Identities=12% Similarity=0.045 Sum_probs=235.5
Q ss_pred cCcceeEecccCCCCCCCCC-CcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHH
Q 014936 33 NEKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQ 111 (415)
Q Consensus 33 ~~~~~i~l~~g~~~~~~~~~-~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~ 111 (415)
+++.++||..|..... ++ .+|.+++++.+++..... .|....+..+.++++++++.+..+ .+.++|++++|+++
T Consensus 48 ~g~~ylD~~~~~~~~~--lG~~~p~v~~A~~~~~~~~~~-~~~~~~~~~~~~~~la~~l~~~~~--~~~~~v~~~~ggse 122 (459)
T 4a6r_A 48 EGNKIIDGMAGLWCVN--VGYGRKDFAEAARRQMEELPF-YNTFFKTTHPAVVELSSLLAEVTP--AGFDRVFYTNSGSE 122 (459)
T ss_dssp TCCEEEETTHHHHTCT--TCBCCHHHHHHHHHHHHHCSC-CCTTSSSCCHHHHHHHHHHHHHSC--TTCCEEEEESSHHH
T ss_pred CCCEEEECCCchhccc--CCCCCHHHHHHHHHHHHhccc-cccccccCCHHHHHHHHHHHHhCC--CCCCEEEEeCchHH
Confidence 4678999988843211 22 479999999998875331 233333445666777777766544 46779999999999
Q ss_pred HHHHHHHHhcC--------CCCEEEEcCCCCcchHHHHHhCCC-------------eEEEeeccC--C-CCCCCC-----
Q 014936 112 AIDVAMALLSR--------PGANILLPRPGFPIYELSAAFRHI-------------EVRHFDLLP--D-KGWEVD----- 162 (415)
Q Consensus 112 al~~~~~~l~~--------~gd~vi~~~p~y~~~~~~~~~~g~-------------~~~~~~~~~--~-~~~~~~----- 162 (415)
++..+++++.+ +++.|++.+|+|+++...+...+. .+..++... . +++ .|
T Consensus 123 A~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~-~d~~~~~ 201 (459)
T 4a6r_A 123 SVDTMIRMVRRYWDVQGKPEKKTLIGRWNGYHGSTIGGASLGGMKYMHEQGDLPIPGMAHIEQPWWYKHGKD-MTPDEFG 201 (459)
T ss_dssp HHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHSCCTTTC---CCSCSSEEEECCCCHHHHCTT-CCHHHHH
T ss_pred HHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHhhcCChhhccccCCCCCCCEEeCCCccccCCcc-cCHHHHH
Confidence 99999999875 578999999999987766554322 222333211 0 111 34
Q ss_pred ---hhHHHhhcCC---CceEEEecCCC-Ccccc-CCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCC
Q 014936 163 ---LDDIESLADQ---NTVALVIINPG-NPCGN-VYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGST 234 (415)
Q Consensus 163 ---~~~l~~~~~~---~~~~v~i~~p~-nptG~-~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~ 234 (415)
+++|++.++. ...++++++|. |++|. .++.+.+++|.++|++||+++|+||+|.++...|... ....++..
T Consensus 202 ~~~~~~le~~i~~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~gr~G~~~-~~~~~~~~ 280 (459)
T 4a6r_A 202 VVAARWLEEKILEIGADKVAAFVGEPIQGAGGVIVPPATYWPEIERICRKYDVLLVADEVICGFGRTGEWF-GHQHFGFQ 280 (459)
T ss_dssp HHHHHHHHHHHHHHCGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSS-HHHHHTCC
T ss_pred HHHHHHHHHHHHHcCCCCEEEEEECCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcccccc-hHhhcCCC
Confidence 7788887752 45566777775 45555 5699999999999999999999999999876665422 12222322
Q ss_pred CCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHH---hh-ccccCCchhHHHHHHHHhhCCCc-HHHHHHHH
Q 014936 235 VPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMK---KY-FDILGDPATFIQAAVPSILQQPD-EVFFKKTL 309 (415)
Q Consensus 235 ~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~---~~-~~~~~~~~~~~~~a~~~~l~~~~-~~~~~~~~ 309 (415)
.+++ +|||+++.+|+|+||+++++ ++++.+. .. ...+++.+++++.++.++|+... ++.+++.+
T Consensus 281 pdi~---t~sK~l~gg~~~lg~v~~~~--------~i~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~ 349 (459)
T 4a6r_A 281 PDLF---TAAKGLSSGYLPIGAVFVGK--------RVAEGLIAGGDFNHGFTYSGHPVCAAVAHANVAALRDEGIVQRVK 349 (459)
T ss_dssp CSEE---EECGGGGTTSSCCEEEEECH--------HHHHHHHHHCTTHHHHHHCSCHHHHHHHHHHHHHHHHTCHHHHHH
T ss_pred CCee---ehhhhhcCCCCCccceeeCH--------HHHHHhhcCCCcccCCCCCCCHHHHHHHHHHHHHHhcchHHHHHH
Confidence 2333 68899766669999999965 6888776 22 22356788999999998886422 12333444
Q ss_pred -HHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCccccC--C----CCCHHHHHHHHHhhcCeEEEcCCCCCCCCe
Q 014936 310 -NLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLD--D----IIDDIDFCFKLAKEESVIILPGTAVGLKNW 382 (415)
Q Consensus 310 -~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~~--~----~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~ 382 (415)
+.....++.+.+.|.++|.+. . .+..|.|+++.+...... . .....++...+ .++||.+.|+. ++
T Consensus 350 ~~~~~~~~~~l~~~l~~~~~~~-~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~Gv~v~~~g-----~~ 421 (459)
T 4a6r_A 350 DDIGPYMQKRWRETFSRFEHVD-D-VRGVGMVQAFTLVKNKAKRELFPDFGEIGTLCRDIF-FRNNLIMRACG-----DH 421 (459)
T ss_dssp HTHHHHHHHHHHHHHTTCTTEE-E-EEEETTEEEEEECSBTTTTBCCSSTTHHHHHHHHHH-HHTTEECEEET-----TE
T ss_pred HHHHHHHHHHHHHHHhcCCCeE-E-EEEEEEEEEEEEecCccccccccchHHHHHHHHHHH-HHCCeEEecCC-----CE
Confidence 344444444545555555454 2 344567777776532100 0 00034555555 45699999863 79
Q ss_pred EEEEe--eCChhhHHHHHHHHHHHHHHHHHHh
Q 014936 383 LRVTF--AVDPYSLEECLDRIKSFYQRHAKQL 412 (415)
Q Consensus 383 iRi~~--~~~~~~l~~~l~~l~~~~~~~~~~~ 412 (415)
+||++ ..+++++++++++|++++++...++
T Consensus 422 iRi~~~~~~t~e~i~~~l~~l~~~l~~~~~~~ 453 (459)
T 4a6r_A 422 IVSAPPLVMTRAEVDEMLAVAERCLEEFEQTL 453 (459)
T ss_dssp EEECCCTTCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 99996 5789999999999999998876654
No 140
>2bkw_A Alanine-glyoxylate aminotransferase 1; analine-glyoxylate aminotransferase, pyridoxal-5-phosphate, SAD, glycolate pathway; HET: LLP; 2.57A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=99.98 E-value=1.4e-31 Score=252.56 Aligned_cols=329 Identities=15% Similarity=0.145 Sum_probs=234.8
Q ss_pred ceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCC-CCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHH
Q 014936 36 KVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAP-TAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAID 114 (415)
Q Consensus 36 ~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~-~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~ 114 (415)
+.+.|..|. .++++.+++++.+.... ..++. .....++++.++++++... +++++++++|+|+++++.
T Consensus 5 ~~~~~~p~p------~~~~~~v~~a~~~~~~~---~~~~~~~~~~~~~~~~l~~~~~~~~--~~~~~~v~~~~g~t~al~ 73 (385)
T 2bkw_A 5 VDTLLIPGP------IILSGAVQKALDVPSLG---HTSPEFVSIFQRVLKNTRAVFKSAA--ASKSQPFVLAGSGTLGWD 73 (385)
T ss_dssp CCEECSSSS------CCCCHHHHHTTSCCCCC---TTSHHHHHHHHHHHHHHHHHTTCCG--GGTCEEEEEESCTTHHHH
T ss_pred cceeecCCC------cCchHHHHHHHhccccc---cCCHHHHHHHHHHHHHHHHHhCCCC--CCCCceEEEcCchHHHHH
Confidence 346666663 45678888777654331 11211 1135678888888886432 245789999999999999
Q ss_pred HHHHHhc---CCCCEEEEc-CCCCcchH-HHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCC-CceEEEecCCCCcccc
Q 014936 115 VAMALLS---RPGANILLP-RPGFPIYE-LSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ-NTVALVIINPGNPCGN 188 (415)
Q Consensus 115 ~~~~~l~---~~gd~vi~~-~p~y~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~v~i~~p~nptG~ 188 (415)
+++.++. ++||+|+++ .++|+... ..++..|++++.++.. +.++.+|+++|++++++ ++++|++++|+||||.
T Consensus 74 ~~~~~~~~~~~~gd~vlv~~~~~~~~~~~~~~~~~g~~~~~v~~~-~~~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~ 152 (385)
T 2bkw_A 74 IFASNFILSKAPNKNVLVVSTGTFSDRFADCLRSYGAQVDVVRPL-KIGESVPLELITEKLSQNSYGAVTVTHVDTSTAV 152 (385)
T ss_dssp HHHHHHSCTTCSCCEEEEECSSHHHHHHHHHHHHTTCEEEEECCS-STTSCCCHHHHHHHHHHSCCSEEEEESEETTTTE
T ss_pred HHHHHHhccCCCCCeEEEEcCCcchHHHHHHHHHcCCceEEEecC-CCCCCCCHHHHHHHHhcCCCCEEEEEccCCCcCe
Confidence 9999998 899999887 55666553 6778889999999872 23456899999999876 7899999999999999
Q ss_pred CCCHHHHHHHHHHHhhc--CcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccC-CCCceEEEEEeeCCCCC
Q 014936 189 VYSYQHLQKLAETANKL--KTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWI-VPGWRLGWFVTTDPCGM 265 (415)
Q Consensus 189 ~~~~~~l~~i~~~~~~~--~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~-~~G~r~G~~~~~~~~~~ 265 (415)
+++ +++|+++|+++ |+++|+|++|+... ....+..++ ..+++.|+||+++ .+| +||+++++
T Consensus 153 ~~~---l~~i~~~~~~~~~~~~li~D~a~~~~~----~~~~~~~~~---~d~~~~s~~K~~~~~~G--~G~~~~~~---- 216 (385)
T 2bkw_A 153 LSD---LKAISQAIKQTSPETFFVVDAVCSIGC----EEFEFDEWG---VDFALTASQKAIGAPAG--LSISLCSS---- 216 (385)
T ss_dssp ECC---HHHHHHHHHHHCTTSEEEEECTTTTTT----SCCCTTTTT---CSEEEEESSSTTCCCSC--EEEEEECH----
T ss_pred EcC---HHHHHHHHHhhCCCCEEEEECccccCC----ccccccccC---ceEEEecCccccccCCc--ceEEEEcH----
Confidence 987 66888899999 99999999998532 111222222 3478899999654 467 59999865
Q ss_pred CChHHHHH-HHH----------------------hhcc----ccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHH
Q 014936 266 FRKPKVVE-RMK----------------------KYFD----ILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDI 318 (415)
Q Consensus 266 ~~~~~~~~-~~~----------------------~~~~----~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~ 318 (415)
++++ .++ .... ..++.+...+.++..+++...+..+++..+++++++++
T Consensus 217 ----~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~ 292 (385)
T 2bkw_A 217 ----RFMDYALNDSKNGHVHGYFSSLRRWTPIMENYEAGKGAYFATPPVQLINSLDVALKEILEEGLHKRWDLHREMSDW 292 (385)
T ss_dssp ----HHHHHHTCHHHHCCCSCSTTCHHHHHHHHHHHHTTCCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHH
T ss_pred ----HHHHHHHhhccCCCCCceeecHHHHhhHHHhhhccCCCCCCCCCHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHH
Confidence 3443 221 1110 01356667777776666532222367788999999999
Q ss_pred HHHHh-hcCCCCcCCCCC-----CCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCC-CCeEEEE-ee--
Q 014936 319 CYNKI-KEIPCISCPHKP-----EGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGL-KNWLRVT-FA-- 388 (415)
Q Consensus 319 l~~~l-~~~~~~~~~~~p-----~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~-~~~iRi~-~~-- 388 (415)
+.+.| +++ ++.++ .| ..++++|+.++ +..++...+ .++||.+.+|..+.. .+++||+ ++
T Consensus 293 l~~~L~~~~-g~~~~-~~~~~~~~~~~~~~~~~~--------~~~~~~~~l-~~~gi~v~~g~~~~~~~~~iRis~~~~~ 361 (385)
T 2bkw_A 293 FKDSLVNGL-QLTSV-SRYPSNMSAHGLTAVYVA--------DPPDVIAFL-KSHGVVIAGGIHKDIGPKYIRIGHMGVT 361 (385)
T ss_dssp HHHHHHTTT-CCEES-SCSSSTTBCSSCEEEECS--------CHHHHHHHH-HHTTEECBCCCCTTTGGGEEEECCCGGG
T ss_pred HHHHHHHhc-Cceec-ccCcccccCCceEEEecC--------CHHHHHHHH-HHCCeEEeCCCCcccCCCEEEEEccccc
Confidence 99999 888 77733 32 24778888875 245666666 567999999876532 5799999 65
Q ss_pred ---CChhhHHHHHHHHHHHHHH
Q 014936 389 ---VDPYSLEECLDRIKSFYQR 407 (415)
Q Consensus 389 ---~~~~~l~~~l~~l~~~~~~ 407 (415)
.+++++++++++|++++++
T Consensus 362 ~~~~~~e~i~~~~~~l~~~~~~ 383 (385)
T 2bkw_A 362 ACNKNLPYMKNCFDLIKLALQR 383 (385)
T ss_dssp TSSTTCTHHHHHHHHHHHHTTC
T ss_pred cccCCHHHHHHHHHHHHHHHHh
Confidence 4889999999999987653
No 141
>3gju_A Putative aminotransferase; pyridoxal phosphate, PLP-dependent transferase-like fold, ST genomics, joint center for structural genomics, JCSG; HET: MSE LLP PLP; 1.55A {Mesorhizobium loti} PDB: 3fcr_A*
Probab=99.98 E-value=1.5e-30 Score=250.93 Aligned_cols=356 Identities=13% Similarity=0.010 Sum_probs=236.6
Q ss_pred ccCcceeEecccCCCCCCCCC-CcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChH
Q 014936 32 KNEKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCT 110 (415)
Q Consensus 32 ~~~~~~i~l~~g~~~~~~~~~-~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~ 110 (415)
.+++.++||..|..... ++ .+|.+++++.+++..... .|....+..++++++++++.+.. +.+.++|++++|++
T Consensus 48 ~~G~~~lD~~~~~~~~~--lG~~~p~v~~A~~~~~~~~~~-~~~~~~~~~~~~~~la~~l~~~~--~~~~~~v~~~~gGs 122 (460)
T 3gju_A 48 NNGRKSIDAFAGLYCVN--VGYGRQKIADAIATQAKNLAY-YHAYVGHGTEASITLAKMIIDRA--PKGMSRVYFGLSGS 122 (460)
T ss_dssp TTCCEEEETTHHHHTCT--TCBCCHHHHHHHHHHHHHHSC-CCCCTTCCCHHHHHHHHHHHHHS--CTTEEEEEEESSHH
T ss_pred CCCCEEEECCcchhhcc--CCCCCHHHHHHHHHHHHhccc-cccccccCCHHHHHHHHHHHhhC--CCCcCEEEEeCchH
Confidence 35778999998842211 22 469999999998775321 23333344566666666666543 34678999999999
Q ss_pred HHHHHHHHHhcC--------CCCEEEEcCCCCcchHHHHHhCCC-------------eEEEeeccC---CCCCCCC----
Q 014936 111 QAIDVAMALLSR--------PGANILLPRPGFPIYELSAAFRHI-------------EVRHFDLLP---DKGWEVD---- 162 (415)
Q Consensus 111 ~al~~~~~~l~~--------~gd~vi~~~p~y~~~~~~~~~~g~-------------~~~~~~~~~---~~~~~~~---- 162 (415)
++++.+++++.. +++.|++.+++|+++...+...+. .+..++... .++++.+
T Consensus 123 eA~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~ 202 (460)
T 3gju_A 123 DANETNIKLIWYYNNVLGRPEKKKIISRWRGYHGSGVMTGSLTGLDLFHNAFDLPRAPVLHTEAPYYFRRTDRSMSEEQF 202 (460)
T ss_dssp HHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHCCCGGGTTTTTCSCTTEEEECCCCGGGCSCTTCCHHHH
T ss_pred HHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCCCHHHhhccCCcccccccCCCCCCCEEeCCCccccCCccccChhHH
Confidence 999999999873 468999999999987765544321 233344211 0111233
Q ss_pred ----hhHHHhhcCC---CceEEEecCC-CCcccc-CCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCC
Q 014936 163 ----LDDIESLADQ---NTVALVIINP-GNPCGN-VYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS 233 (415)
Q Consensus 163 ----~~~l~~~~~~---~~~~v~i~~p-~nptG~-~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~ 233 (415)
+++|+++++. ...++++++| +|++|. +++.+.+++|.++|++||+++|+||+|.++...|... ....++.
T Consensus 203 ~~~~~~~le~~i~~~~~~~~aaii~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~gr~g~~~-~~~~~~~ 281 (460)
T 3gju_A 203 SQHCADKLEEMILAEGPETIAAFIGEPILGTGGIVPPPAGYWEKIQAVLKKYDVLLVADEVVTGFGRLGTMF-GSDHYGI 281 (460)
T ss_dssp HHHHHHHHHHHHHHHCGGGEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSC-HHHHHTC
T ss_pred HHHHHHHHHHHHHhcCCCCEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcccccc-hHhhcCC
Confidence 5788887752 3344555555 667776 6788899999999999999999999999876555322 1222232
Q ss_pred CCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhh--------ccccCCchhHHHHHHHHhhCCCc-HHH
Q 014936 234 TVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKY--------FDILGDPATFIQAAVPSILQQPD-EVF 304 (415)
Q Consensus 234 ~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~a~~~~l~~~~-~~~ 304 (415)
..++ .+|||+++.+++|+||+++++ ++++.+... ...+++.+++++.++.++|+... ++.
T Consensus 282 ~pdi---~t~sK~l~gG~~~lg~v~~~~--------~i~~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~ 350 (460)
T 3gju_A 282 KPDL---ITIAKGLTSAYAPLSGVIVAD--------RVWQVLVQGSDKLGSLGHGWTYSAHPICVAAGVANLELIDEMDL 350 (460)
T ss_dssp CCSE---EEECGGGTTTSSCCEEEEEEH--------HHHHHHHHHHHHHCSCSCCCTTTTCHHHHHHHHHHHHHHHHTTH
T ss_pred CCCe---eeeehhhcCCCCCeEEEEECH--------HHHHHHhcccccccccccCCCCCCCHHHHHHHHHHHHHHHhccH
Confidence 2223 368999654338999999976 688877521 22356788999999998887422 234
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCccccC--C----CCCHHHHHHHHHhhcCeEEEcCCCCC
Q 014936 305 FKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLD--D----IIDDIDFCFKLAKEESVIILPGTAVG 378 (415)
Q Consensus 305 ~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~~--~----~~~~~~~~~~ll~~~gi~v~~g~~~~ 378 (415)
+++..+..+..++.+.+.++++|.+. . .+..|.++++.+...... . .....++...+ .++||.+.|+.
T Consensus 351 ~~~~~~~~~~~~~~l~~~l~~~~~~~-~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~Gv~v~~~~--- 424 (460)
T 3gju_A 351 VTNAGETGAYFRAELAKAVGGHKNVG-E-VRGDGMLAAVEFVADKDDRVFFDASQKIGPQVATAL-AASGVIGRAMP--- 424 (460)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTSTTEE-E-EEEETTEEEEEECSBTTTTBCCCGGGCHHHHHHHHH-HHTTEECEECS---
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCeE-E-EeeeeEEEEEEEccCccccccccchHHHHHHHHHHH-HHCCeEEecCC---
Confidence 55555666666666666666666554 2 344567777776532110 0 00133455555 56699999875
Q ss_pred CCCeEEEEe--eCChhhHHHHHHHHHHHHHHHHH
Q 014936 379 LKNWLRVTF--AVDPYSLEECLDRIKSFYQRHAK 410 (415)
Q Consensus 379 ~~~~iRi~~--~~~~~~l~~~l~~l~~~~~~~~~ 410 (415)
..+++||++ ..+++++++++++|++++++..+
T Consensus 425 ~~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~~~~ 458 (460)
T 3gju_A 425 QGDILGFAPPLCLTREQADIVVSKTADAVKSVFA 458 (460)
T ss_dssp SSCEEEECCCTTCCHHHHHHHHHHHHHHHHHHHC
T ss_pred CCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 358999996 57899999999999999987654
No 142
>1z7d_A Ornithine aminotransferase; structural genomics consortium, SGC, malaria; 2.10A {Plasmodium yoelii yoelii} SCOP: c.67.1.4 PDB: 3lg0_A 3ntj_A
Probab=99.98 E-value=5.8e-31 Score=251.71 Aligned_cols=334 Identities=16% Similarity=0.173 Sum_probs=223.2
Q ss_pred ccCcceeEecccCCCCCCCCC-CcHHHHHHHHHHHhcCCC--CCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCC
Q 014936 32 KNEKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLSEKF--NGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSG 108 (415)
Q Consensus 32 ~~~~~~i~l~~g~~~~~~~~~-~~~~~~~a~~~~~~~~~~--~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g 108 (415)
.+++.++||..|.+. ..++ .+|.+.+++.+++..... ..|+ .....++++.+++++ ..+++++++|
T Consensus 62 ~~G~~ylD~~~g~~~--~~lgh~~p~v~~ai~~~~~~~~~~~~~~~-~~~~~~l~~~la~~~--------g~~~v~~~~s 130 (433)
T 1z7d_A 62 VNDKRYYDFLSAYSS--VNQGHCHPNILNAMINQAKNLTICSRAFF-SVPLGICERYLTNLL--------GYDKVLMMNT 130 (433)
T ss_dssp TTCCEEEESSHHHHT--TTTCBTCHHHHHHHHHHHTTCSCCCTTSE-EHHHHHHHHHHHHHH--------TCSEEEEESS
T ss_pred CCCCEEEEcccchhh--cccCCCCHHHHHHHHHHHHhCCCccCCcC-CHHHHHHHHHHHhhc--------CCCeEEEeCC
Confidence 346778999887532 1255 789999999999875322 1232 223456666666665 3589999999
Q ss_pred hHHHHHHHHHHhc---------CCC-CEEEEcCCCCcchHHHH-HhCC------------CeEEEeeccCCCCCCCChhH
Q 014936 109 CTQAIDVAMALLS---------RPG-ANILLPRPGFPIYELSA-AFRH------------IEVRHFDLLPDKGWEVDLDD 165 (415)
Q Consensus 109 ~~~al~~~~~~l~---------~~g-d~vi~~~p~y~~~~~~~-~~~g------------~~~~~~~~~~~~~~~~~~~~ 165 (415)
+++|+..+++++. .+| ++|++.+|+|++....+ ...| .++..++. .|+++
T Consensus 131 GseA~~~al~~a~~~~~~~~g~~~gr~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~p~~~~v~~~~~-------~d~~~ 203 (433)
T 1z7d_A 131 GAEANETAYKLCRKWGYEVKKIPENMAKIVVCKNNFSGRTLGCISASTTKKCTSNFGPFAPQFSKVPY-------DDLEA 203 (433)
T ss_dssp HHHHHHHHHHHHHHHHHHTSCCCTTCCEEEEETTC--------------------------CEEEECT-------TCHHH
T ss_pred HHHHHHHHHHHHHHHhhhccCCCCCCCeEEEEeCCcCCcchhhhcccCCccccccCCCCCCCeEEeCC-------CCHHH
Confidence 9999999998864 467 99999999998765432 2223 23333432 38999
Q ss_pred HHhhc-CCCceEEEecCC-CCccccC-CCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEcc
Q 014936 166 IESLA-DQNTVALVIINP-GNPCGNV-YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGS 242 (415)
Q Consensus 166 l~~~~-~~~~~~v~i~~p-~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s 242 (415)
|++++ .+++++ ++++| +|++|.+ ++.+++++|.++|+++|+++|+||+|.++.+.+... .+..++...+++ |
T Consensus 204 le~~l~~~~~~~-vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~g~~g~~~-~~~~~~~~~di~---t 278 (433)
T 1z7d_A 204 LEEELKDPNVCA-FIVEPIQGEAGVIVPSDNYLQGVYDICKKYNVLFVADEVQTGLGRTGKLL-CVHHYNVKPDVI---L 278 (433)
T ss_dssp HHHHHTSTTEEE-EEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSS-GGGGGTCCCSEE---E
T ss_pred HHHHhCCCCEEE-EEEECCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCccCCCcCCcch-hhHhcCCCCCEE---E
Confidence 99998 455555 55556 5678975 788999999999999999999999998765544321 122222222232 8
Q ss_pred CccccCCCC-ceEEEEEeeCCCCCCChHHHHHHHHhh-ccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHH
Q 014936 243 LSKRWIVPG-WRLGWFVTTDPCGMFRKPKVVERMKKY-FDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICY 320 (415)
Q Consensus 243 ~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~ 320 (415)
+||.++ +| +|+||+++++ ++++.+... ...+++.+++++.++.++|+...+ ++..++++++++++.
T Consensus 279 ~sK~l~-~G~~~~G~v~~~~--------~~~~~l~~~~~~~t~~~~~~~~aaa~aal~~~~~---~~~~~~~~~~~~~l~ 346 (433)
T 1z7d_A 279 LGKALS-GGHYPISAVLAND--------DIMLVIKPGEHGSTYGGNPLAASICVEALNVLIN---EKLCENAEKLGGPFL 346 (433)
T ss_dssp ECGGGG-TTSSCCEEEEECH--------HHHTTCCTTCCCCTTTTCHHHHHHHHHHHHHHHH---TTHHHHHHHHHHHHH
T ss_pred ECcccc-CCCCCeEEEEECH--------HHHhhhccccccccCCCCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHH
Confidence 899987 78 9999999965 566655443 223456788888888888764211 245667777777777
Q ss_pred HHhhcC-CCCcCC-CCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEee--CChhhHHH
Q 014936 321 NKIKEI-PCISCP-HKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFA--VDPYSLEE 396 (415)
Q Consensus 321 ~~l~~~-~~~~~~-~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~--~~~~~l~~ 396 (415)
+.|+++ .++..+ ..+..|.++|+.++... .+..++...++ ++||.+.|+. .+++|++++ .+++++++
T Consensus 347 ~~L~~l~~~~~~~~~~~~~g~~~~i~~~~~~----~~~~~~~~~l~-~~Gv~v~~~~----~~~iRi~~~~~~t~e~i~~ 417 (433)
T 1z7d_A 347 ENLKRELKDSKIVRDVRGKGLLCAIEFKNEL----VNVLDICLKLK-ENGLITRDVH----DKTIRLTPPLCITKEQLDE 417 (433)
T ss_dssp HHHHHHHTTCTTEEEEEEETTEEEEEECTTT----CCHHHHHHHHH-HTTEECCEET----TTEEEECCCTTCCHHHHHH
T ss_pred HHHHHHHHhCCCeEEEEeeeeEEEEEEccCh----hHHHHHHHHHH-HCCeEEecCC----CCEEEEECCcCCCHHHHHH
Confidence 777653 122211 12446778888886421 13566777765 5699998862 579999884 68999999
Q ss_pred HHHHHHHHHHHHH
Q 014936 397 CLDRIKSFYQRHA 409 (415)
Q Consensus 397 ~l~~l~~~~~~~~ 409 (415)
++++|++++++..
T Consensus 418 ~l~~l~~~l~~~~ 430 (433)
T 1z7d_A 418 CTEIIVKTVKFFD 430 (433)
T ss_dssp HHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHH
Confidence 9999999987653
No 143
>3a9z_A Selenocysteine lyase; PLP, cytoplasm, pyridoxal phosphate, transferase; HET: PLP SLP; 1.55A {Rattus norvegicus} PDB: 3a9x_A* 3a9y_A* 3gzd_A* 3gzc_A* 2hdy_A*
Probab=99.98 E-value=6.9e-31 Score=251.69 Aligned_cols=333 Identities=14% Similarity=0.102 Sum_probs=222.2
Q ss_pred cceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCC---------CcHHHHHHHHHHHhhhCCCCCCCCcEEE
Q 014936 35 KKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTA---------GLPLTRRAIAEYLSRDLPYKLTPNDVFV 105 (415)
Q Consensus 35 ~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~---------g~~~lr~~ia~~~~~~~~~~~~~~~i~i 105 (415)
.+.+.|+.+.+. ++++.+++++.+.+.. ...|+... ...++|+.+++++ ++++++|++
T Consensus 17 ~~~~~Ld~~~~~-----~~~~~v~~a~~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~~la~~~------g~~~~~v~~ 83 (432)
T 3a9z_A 17 NRKVYMDYNATT-----PLEPEVIQAVTEAMKE--AWGNPSSSYVAGRKAKDIINTARASLAKMI------GGKPQDIIF 83 (432)
T ss_dssp -CCEECBTTTCC-----CCCHHHHHHHHHHHHH--CCSCTTCSSHHHHHHHHHHHHHHHHHHHHH------TCCGGGEEE
T ss_pred CCcEEeeCCccC-----CCCHHHHHHHHHHHHH--hcCCCccCcHHHHHHHHHHHHHHHHHHHHc------CCCcCeEEE
Confidence 456888887642 5678999999998764 22344321 1358999999998 457789999
Q ss_pred eCChHHHHHHHHHHhc--------CCCCEEEEcCCCCcch-----------------HHHHHhCCCeEEEeeccCCCCCC
Q 014936 106 TSGCTQAIDVAMALLS--------RPGANILLPRPGFPIY-----------------ELSAAFRHIEVRHFDLLPDKGWE 160 (415)
Q Consensus 106 ~~g~~~al~~~~~~l~--------~~gd~vi~~~p~y~~~-----------------~~~~~~~g~~~~~~~~~~~~~~~ 160 (415)
|+|+++++.+++.++. ++||+|+++.|+|+.+ ...++..|.+++.++.+++ ++.
T Consensus 84 ~~g~t~a~~~~~~~~~~~~~~~~~~~gd~vl~~~p~y~~~~~i~~~~~~h~s~~~~~~~~~~~~g~~v~~v~~~~~-~~~ 162 (432)
T 3a9z_A 84 TSGGTESNNLVIHSTVRCFHEQQTLQGRTVDQISPEEGTRPHFITCTVEHDSIRLPLEHLVEDQVAEVTFVPVSKV-NGQ 162 (432)
T ss_dssp ESCHHHHHHHHHHHHHHHHHHHHHHC------------CCCEEEEETTCCHHHHHHHHHHHHTTSCEEEEECCCTT-TSS
T ss_pred eCChHHHHHHHHHHHHhhhhhccccCCccccccccccccCCeEEEecCcchhHHHHHHHHHHhcCcEEEEEecCcc-cCC
Confidence 9999999999999986 5899999999999865 3344557999999987542 346
Q ss_pred CChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcC----------cEEEEccccCCcccCCCCcccccc
Q 014936 161 VDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLK----------TLVIADEVYGHLVFGDKPFVPMGV 230 (415)
Q Consensus 161 ~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~----------~~li~De~~~~~~~~~~~~~~~~~ 230 (415)
+|+++|++++++++++|++++|+||||.+++. ++|.++|+++| +++|+|++|+.+. ....+..
T Consensus 163 ~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~~---~~i~~l~~~~~~~~~~~~~~~~~livDea~~~~~----~~~~~~~ 235 (432)
T 3a9z_A 163 VEVEDILAAVRPTTCLVTIMLANNETGVIMPI---SEISRRIKALNQIRAASGLPRVLVHTDAAQALGK----RRVDVED 235 (432)
T ss_dssp CCHHHHHHTCCTTEEEEECCSBCTTTCBBCCH---HHHHHHHHHHHHHHHHHTCCCCEEEEECTTTTTT----SCCCHHH
T ss_pred cCHHHHHHhccCCceEEEEECcccCcccccCH---HHHHHHHHhcCcccccccCCceEEEEEchhhhCC----cccChhh
Confidence 89999999998889999999999999999885 56778888988 9999999997632 2222222
Q ss_pred cCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHHh--------hccccCCchhHHHHHHHHhhCCCcH
Q 014936 231 FGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKK--------YFDILGDPATFIQAAVPSILQQPDE 302 (415)
Q Consensus 231 ~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~a~~~~l~~~~~ 302 (415)
...+ +++.|+||++ |.|+||+++++... ...+.. .....++.+...+.++.++++.. .
T Consensus 236 ~~~d---~~~~s~~K~~---g~~~G~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~aal~~~-~ 301 (432)
T 3a9z_A 236 LGVD---FLTIVGHKFY---GPRIGALYVRGVGK-------LTPLYPMLFGGGQERNFRPGTENTPMIAGLGKAADLV-S 301 (432)
T ss_dssp HCCS---EEEEEGGGTT---CCSCEEEEETTBTT-------TBCCCCSCCSSCGGGGTSCSCCCHHHHHHHHHHHHHH-H
T ss_pred cCCC---EEEEehhHhc---CCcceEEEEccccc-------cCCcCceeecCCccccccCCCcCHHHHHHHHHHHHHH-H
Confidence 3332 5688999986 46699999975320 111111 11123456777777776676532 2
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCCCcCC-CCC-----CCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCC
Q 014936 303 VFFKKTLNLLKQSVDICYNKIKEIPCISCP-HKP-----EGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTA 376 (415)
Q Consensus 303 ~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~-~~p-----~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~ 376 (415)
+++++..++++++++++.+.|++++++.+. ..| ..+..+++.++... .+..++...+ .++.+.+|..
T Consensus 302 ~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~l---~~i~~~~G~~ 374 (432)
T 3a9z_A 302 ENCETYEAHMRDIRDYLEERLEAEFGKRIHLNSRFPGVERLPNTCNFSIQGSQ----LRGYMVLAQC---QTLLASVGAS 374 (432)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHGGGEEESSCCTTCCBCTTEEEEEECSTT----CCHHHHHHHC---SSEECBSSCG
T ss_pred hhHHHHHHHHHHHHHHHHHHHHhccCCcEEEeCCCCcccCCCCEEEEEeCCCC----CcHHHHHHHh---cCeEEecccc
Confidence 467888899999999999999875454311 122 12334544454210 1344444432 3777777654
Q ss_pred C---------------CC-----CCeEEEEeeC--ChhhHHHHHHHHHHHHHHHH
Q 014936 377 V---------------GL-----KNWLRVTFAV--DPYSLEECLDRIKSFYQRHA 409 (415)
Q Consensus 377 ~---------------~~-----~~~iRi~~~~--~~~~l~~~l~~l~~~~~~~~ 409 (415)
| +. .+++||+++. ++++++.++++|++++++++
T Consensus 375 ~~~~~~~~~~~~l~~~g~~~~~~~~~iRis~~~~~t~eei~~~~~~l~~~~~~~~ 429 (432)
T 3a9z_A 375 CHSDHEDRPSPVLLSCGIPVDVARNAVRLSVGRSTTRAEVDLIVQDLKQAVNQLE 429 (432)
T ss_dssp GGGGGTTSCCHHHHHTTCCHHHHTTEEEEECCTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCCCCCccHHHHhcCCCccccCceEEEEcCCCCCHHHHHHHHHHHHHHHHHhc
Confidence 4 22 3789999964 89999999999999987653
No 144
>3n5m_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, csgid; 2.05A {Bacillus anthracis}
Probab=99.98 E-value=1.2e-30 Score=251.35 Aligned_cols=350 Identities=14% Similarity=0.078 Sum_probs=225.8
Q ss_pred cCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHH
Q 014936 33 NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQA 112 (415)
Q Consensus 33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~a 112 (415)
+++.++||..|.+....+ ..+|.+++++.+++..... ....+..+.++++++++.+..+ ...+ |++|+|++++
T Consensus 47 ~g~~~lD~~~~~~~~~lG-~~~p~v~~A~~~~~~~~~~---~~~~~~~~~~~~la~~l~~~~~--~~~~-v~~~~ggseA 119 (452)
T 3n5m_A 47 QGKRYLDGMSGLWCVNSG-YGRKELAEAAYKQLQTLSY---FPMSQSHEPAIKLAEKLNEWLG--GEYV-IFFSNSGSEA 119 (452)
T ss_dssp TCCEEEETTHHHHTCTTC-BCCHHHHHHHHHHHTTCCC---CCTTSEEHHHHHHHHHHHHHHT--SCEE-EEEESSHHHH
T ss_pred CCCEEEECCcchhhccCC-CCCHHHHHHHHHHHHhcCC---cccccCCHHHHHHHHHHHHhCC--CCce-EEEeCchHHH
Confidence 477899999884221211 2479999999999875322 1122334555555555554433 3344 9999999999
Q ss_pred HHHHHHHhc-----C---CCCEEEEcCCCCcchHHHHHhCCCe-------------EEEeeccCCCCCCC-C--------
Q 014936 113 IDVAMALLS-----R---PGANILLPRPGFPIYELSAAFRHIE-------------VRHFDLLPDKGWEV-D-------- 162 (415)
Q Consensus 113 l~~~~~~l~-----~---~gd~vi~~~p~y~~~~~~~~~~g~~-------------~~~~~~~~~~~~~~-~-------- 162 (415)
++.+++.+. . +++.|++.+|+|+++...+...+.. +..++......... |
T Consensus 120 ~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (452)
T 3n5m_A 120 NETAFKIARQYYAQKGEPHRYKFMSRYRGYHGNTMATMAATGQAQRRYQYEPFASGFLHVTPPDCYRMPGIERENIYDVE 199 (452)
T ss_dssp HHHHHHHHHHHHHTTTCTTCCEEEEETTCCCCSSHHHHHSCCCGGGTTTTCCCCSCEEEECCCCTTTSTTTTTSCGGGCH
T ss_pred HHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCCCHHHHhcCCchhhccccCCCCCCCeEeCCCccccCccCCchhhHHHH
Confidence 999999987 5 7899999999999877665544322 22222211000001 1
Q ss_pred -hhHHHhhcC----CCceEEEecCC-CCccccCC-CHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCC
Q 014936 163 -LDDIESLAD----QNTVALVIINP-GNPCGNVY-SYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTV 235 (415)
Q Consensus 163 -~~~l~~~~~----~~~~~v~i~~p-~nptG~~~-~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~ 235 (415)
+++|++.++ ++++++++..+ +| +|.++ +.+.+++|.++|++||+++|+||+|.++.+.|... .....+...
T Consensus 200 ~~~~le~~l~~~~~~~~~~vi~ep~~~n-~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~g~~g~~~-~~~~~~~~~ 277 (452)
T 3n5m_A 200 CVKEVDRVMTWELSETIAAFIMEPIITG-GGILMAPQDYMKAVHETCQKHGALLISDEVICGFGRTGKAF-GFMNYDVKP 277 (452)
T ss_dssp HHHHHHHHHHHHCGGGEEEEEECSSBTT-TTCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSS-GGGGTTCCC
T ss_pred HHHHHHHHHHhcCCCCEEEEEEccccCC-CCeeeCCHHHHHHHHHHHHHcCCEEEEecchhCCCcccccc-hhhhcCCCC
Confidence 788988886 34555555555 79 99765 88889999999999999999999999876655422 222222222
Q ss_pred CeEEEccCccccCCCC-ceEEEEEeeCCCCCCChHHHHHHHHh----h---ccccCCchhHHHHHHHHhhCCCcH-HHHH
Q 014936 236 PILTLGSLSKRWIVPG-WRLGWFVTTDPCGMFRKPKVVERMKK----Y---FDILGDPATFIQAAVPSILQQPDE-VFFK 306 (415)
Q Consensus 236 ~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~----~---~~~~~~~~~~~~~a~~~~l~~~~~-~~~~ 306 (415)
+ +.+|||.+++ | +|+||+++++ ++++.+.. . ...+++.+++++.++.++|+...+ +..+
T Consensus 278 d---i~t~sK~l~~-G~~~ig~~~~~~--------~i~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~ 345 (452)
T 3n5m_A 278 D---IITMAKGITS-AYLPLSATAVKR--------EIYEAFKGKGEYEFFRHINTFGGNPAACALALKNLEIIENENLIE 345 (452)
T ss_dssp S---EEEECGGGGT-TSSCCEEEEEEH--------HHHGGGCSSSTTCSCCCCCSSTTCHHHHHHHHHHHHHHHHTTHHH
T ss_pred C---EEeecccccC-CCcceEEEEECH--------HHHHHHhhccCCCCccccCCCCCCHHHHHHHHHHHHHHHhccHHH
Confidence 2 3368999866 9 9999999975 67777643 1 123567889999999888864211 2233
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCccccCC--C--CCHHHHHHHHHhhcCeEEEcCCCCCC--C
Q 014936 307 KTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLDD--I--IDDIDFCFKLAKEESVIILPGTAVGL--K 380 (415)
Q Consensus 307 ~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~~~--~--~~~~~~~~~ll~~~gi~v~~g~~~~~--~ 380 (415)
+..+..+..++.+.+.+.++|.+. . .+..|.++++.+....... . ....++...+ .++||.+.|+..|.. .
T Consensus 346 ~~~~~~~~l~~~L~~~~~~~~~~~-~-~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~l-~~~Gv~~~~~~~~~~~~~ 422 (452)
T 3n5m_A 346 RSAQMGSLLLEQLKEEIGEHPLVG-D-IRGKGLLVGIELVNDKETKEPIDNDKIASVVNAC-KEKGLIIGRNGMTTAGYN 422 (452)
T ss_dssp HHHHHHHHHHHHHHHHHTTCTTEE-E-EEESSSCEEEEEEEETTTTEECCHHHHHHHHHHH-HHTTEECEECTTSSTTCC
T ss_pred HHHHHHHHHHHHHHHHHhcCCCeE-E-EEEEEEEEEEEEecCCcccCCCCHHHHHHHHHHH-HHCCcEEeecCcccCCCC
Confidence 333333334444444444555444 2 3455667777663211000 0 0013455555 567999999886533 5
Q ss_pred CeEEEEe--eCChhhHHHHHHHHHHHHH
Q 014936 381 NWLRVTF--AVDPYSLEECLDRIKSFYQ 406 (415)
Q Consensus 381 ~~iRi~~--~~~~~~l~~~l~~l~~~~~ 406 (415)
+++||++ ..+++++++++++|+++++
T Consensus 423 ~~iRi~~~~~~t~e~i~~~l~~l~~~l~ 450 (452)
T 3n5m_A 423 NILTLAPPLVISSEEIAFVIGTLKTAME 450 (452)
T ss_dssp CEEEECCCTTCCHHHHHHHHHHHHHHHT
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHHHHH
Confidence 8999986 4789999999999998875
No 145
>1w23_A Phosphoserine aminotransferase; pyridoxal-5'-phosphate; HET: PGE PLP EPE; 1.08A {Bacillus alcalophilus} SCOP: c.67.1.4 PDB: 2bhx_A* 2bi1_A* 2bi2_A* 2bi3_A* 2bi5_A* 2bi9_A* 2bia_A* 2bie_A* 2big_A*
Probab=99.98 E-value=1.5e-31 Score=249.96 Aligned_cols=323 Identities=15% Similarity=0.111 Sum_probs=224.5
Q ss_pred ceeEecccCCCCCCCCCCcHHHHHHHHHHHhcC---CCCCCCC---CCC----cHHHHHHHHHHHhhhCCCCCCCCcEEE
Q 014936 36 KVISLAMGDPTVHSCFHTTHVATEAVAEALLSE---KFNGYAP---TAG----LPLTRRAIAEYLSRDLPYKLTPNDVFV 105 (415)
Q Consensus 36 ~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~---~~~~y~~---~~g----~~~lr~~ia~~~~~~~~~~~~~~~i~i 105 (415)
.++++..|. .++++.+++++.+.+... ....|.. ..+ ..++++.+++++ |.. ++++|++
T Consensus 3 ~~~~~~~g~------~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~----g~~-~~~~v~~ 71 (360)
T 1w23_A 3 QVFNFNAGP------SALPKPALERAQKELLNFNDTQMSVMELSHRSQSYEEVHEQAQNLLRELL----QIP-NDYQILF 71 (360)
T ss_dssp CCEECCSSS------CCCCHHHHHHHHHTSSSSTTSSSCGGGSCTTSHHHHHHHHHHHHHHHHHH----TCC-TTEEEEE
T ss_pred ceEeecCCC------cCCCHHHHHHHHHHhhhhccccccccccCCCCHHHHHHHHHHHHHHHHHh----CCC-CCceEEE
Confidence 357777774 366799999999887531 0111111 122 345556666655 432 3579999
Q ss_pred eCCh-HHHHHHHHHHhcCC---CCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHh-hcCCCceEEEec
Q 014936 106 TSGC-TQAIDVAMALLSRP---GANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIES-LADQNTVALVII 180 (415)
Q Consensus 106 ~~g~-~~al~~~~~~l~~~---gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~v~i~ 180 (415)
++|+ ++++.+++.++..+ ||.|+++.++|.. ...++..| +++.++.+++++ .+|++++++ ++++++++++++
T Consensus 72 ~~g~gt~al~~~~~~l~~~~~~g~~vi~~~~~~~~-~~~~~~~g-~~~~v~~~~~~~-~~d~~~l~~~~i~~~~k~v~~~ 148 (360)
T 1w23_A 72 LQGGASLQFTMLPMNLLTKGTIGNYVLTGSWSEKA-LKEAKLLG-ETHIAASTKANS-YQSIPDFSEFQLNENDAYLHIT 148 (360)
T ss_dssp ESSHHHHHHHHHHHHHCCTTCEEEEEECSHHHHHH-HHHHHTTS-EEEEEEECGGGT-SCSCCCGGGCCCCTTEEEEEEE
T ss_pred ECCcchHHHHHHHHHhcCCCCcccEEEecchhHHH-HHHHHHhC-CeEEeecccccC-cCCccchHhhccCCCCCEEEEe
Confidence 9999 99999999998865 5677777777765 34467789 999998864333 378999998 888889999999
Q ss_pred CCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEee
Q 014936 181 NPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTT 260 (415)
Q Consensus 181 ~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~ 260 (415)
+|+||||.+++ ++ ++++|+++|+|++|+.+.. ...+..+ .++++|+||.|+++| +||++++
T Consensus 149 ~~~nptG~~~~--~i------~~~~~~~li~D~a~~~~~~----~~~~~~~-----di~~~s~sK~~~~~G--~G~~~~~ 209 (360)
T 1w23_A 149 SNNTIYGTQYQ--NF------PEINHAPLIADMSSDILSR----PLKVNQF-----GMIYAGAQKNLGPSG--VTVVIVK 209 (360)
T ss_dssp SEETTTTEECS--SC------CCCCSSCEEEECTTTTTSS----CCCGGGC-----SEEEEETTTTTSCTT--CEEEEEE
T ss_pred CCCCCcceecc--cc------cccCCceEEEechhhcCCC----CcCcccC-----CEEEEEcccccCCCC--cEEEEEc
Confidence 99999999987 22 2379999999999987542 1223222 178899999988777 8999987
Q ss_pred CCCCCCChHHHHHHHHhhc-------------cccCCchhHHHHHHHHhhCCCcHH-HHHHHHHHHHHHHHHHHHHhhcC
Q 014936 261 DPCGMFRKPKVVERMKKYF-------------DILGDPATFIQAAVPSILQQPDEV-FFKKTLNLLKQSVDICYNKIKEI 326 (415)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~a~~~~l~~~~~~-~~~~~~~~~~~~~~~l~~~l~~~ 326 (415)
+ ++++.+.... ....+++...+.++..+++...+. ++++..++++++++++.+.|+++
T Consensus 210 ~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 281 (360)
T 1w23_A 210 K--------DLLNTKVEQVPTMLQYATHIKSDSLYNTPPTFSIYMLRNVLDWIKDLGGAEAIAKQNEEKAKIIYDTIDES 281 (360)
T ss_dssp H--------HHHCSCCTTCCGGGCHHHHHHTTTCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred H--------HHHhhcccCCcchhhhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHc
Confidence 5 3443332211 112345666666666666532222 57888999999999999999988
Q ss_pred CCC-cCCCCC--CCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEee--CChhhHHHHHHHH
Q 014936 327 PCI-SCPHKP--EGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFA--VDPYSLEECLDRI 401 (415)
Q Consensus 327 ~~~-~~~~~p--~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~--~~~~~l~~~l~~l 401 (415)
+++ .....| .++.++|+.++.. .+..++...+ .++||.+.||..+ ++++|++++ .+++++++++++|
T Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~l-~~~gi~~~~~~~~--~~~iRis~~~~~~~~~i~~~~~~l 353 (360)
T 1w23_A 282 NGFYVGHAEKGSRSLMNVTFNLRNE-----ELNQQFLAKA-KEQGFVGLNGHRS--VGGCRASIYNAVPIDACIALRELM 353 (360)
T ss_dssp TTSSEESSCGGGBCSSEEEEECSSH-----HHHHHHHHHH-HHTTEESCBCCTT--TCSEEEECCTTSCHHHHHHHHHHH
T ss_pred cCcccccCCchhccCcEEEEEcCCC-----ccHHHHHHHH-HHCCeeeecCCCC--CCeEEEEecCCCCHHHHHHHHHHH
Confidence 655 411123 2355889888631 1234565554 6679999888754 589999996 5889999999999
Q ss_pred HHHHHH
Q 014936 402 KSFYQR 407 (415)
Q Consensus 402 ~~~~~~ 407 (415)
++++++
T Consensus 354 ~~~~~~ 359 (360)
T 1w23_A 354 IQFKEN 359 (360)
T ss_dssp HHHHHH
T ss_pred HHHHhh
Confidence 887653
No 146
>2oat_A Ornithine aminotransferase; 5-fluoromethylornithine, PLP-dependent ENZ pyridoxal phosphate; HET: PFM; 1.95A {Homo sapiens} SCOP: c.67.1.4 PDB: 1oat_A* 2byj_A* 2byl_A* 1gbn_A* 2can_A*
Probab=99.97 E-value=6.7e-30 Score=244.68 Aligned_cols=332 Identities=14% Similarity=0.113 Sum_probs=235.5
Q ss_pred ccCcceeEecccCCCCCCCCC-CcHHHHHHHHHHHhcCCCC--CCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCC
Q 014936 32 KNEKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLSEKFN--GYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSG 108 (415)
Q Consensus 32 ~~~~~~i~l~~g~~~~~~~~~-~~~~~~~a~~~~~~~~~~~--~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g 108 (415)
.+++.++||..|.+.. .++ .+|.+.+++.+++...... .|. .....++++.+++++ ..+++++++|
T Consensus 73 ~~g~~ylD~~sg~~~~--~lgh~~p~v~~Ai~~~~~~~~~~~~~~~-~~~~~~l~~~la~~~--------g~~~v~~~~s 141 (439)
T 2oat_A 73 VEGRKYFDFLSSYSAV--NQGHCHPKIVNALKSQVDKLTLTSRAFY-NNVLGEYEEYITKLF--------NYHKVLPMNT 141 (439)
T ss_dssp TTCCEEEESSGGGGTT--TTCBTCHHHHHHHHHHHTTCSCCCTTSE-ESSHHHHHHHHHHHH--------TCSEEEEESS
T ss_pred CCCCEEEEccCCcccc--cCCCCCHHHHHHHHHHHHhcCcccCccC-CHHHHHHHHHHHHhc--------CCCEEEEeCC
Confidence 3467789998876431 255 7899999999998753221 232 245678888888877 3689999999
Q ss_pred hHHHHHHHHHHhc---------CCC-CEEEEcCCCCcchHH-HHHhCC------------CeEEEeeccCCCCCCCChhH
Q 014936 109 CTQAIDVAMALLS---------RPG-ANILLPRPGFPIYEL-SAAFRH------------IEVRHFDLLPDKGWEVDLDD 165 (415)
Q Consensus 109 ~~~al~~~~~~l~---------~~g-d~vi~~~p~y~~~~~-~~~~~g------------~~~~~~~~~~~~~~~~~~~~ 165 (415)
+++|+..+++++. .+| |.|++.+|+|++... .....| .++..++. .|+++
T Consensus 142 GseA~~~al~~~~~~~~~~~g~~~g~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~p~~~~v~~~~~-------~d~~~ 214 (439)
T 2oat_A 142 GVEAGETACKLARKWGYTVKGIQKYKAKIVFAAGNFWGRTLSAISSSTDPTSYDGFGPFMPGFDIIPY-------NDLPA 214 (439)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCCTTCCEEEEETTCCCCSSHHHHTTCCCHHHHTTSCSCCTTEEEECS-------SCHHH
T ss_pred HHHHHHHHHHHHHHHhhhccCCCCCCCeEEEEcCCCCCCCHhHhhcCCChhcccCCCCCCCCeEEeCC-------CCHHH
Confidence 9999999999875 357 899999999987654 333334 34445543 38999
Q ss_pred HHhhcC-CCceEEEecCC-CCcccc-CCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEcc
Q 014936 166 IESLAD-QNTVALVIINP-GNPCGN-VYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGS 242 (415)
Q Consensus 166 l~~~~~-~~~~~v~i~~p-~nptG~-~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s 242 (415)
|++.++ ++++ +++++| +|++|. .++.+++++|.++|++||+++|+||+|.++.+.+... .+..++...+++ |
T Consensus 215 le~~l~~~~~~-~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~g~g~~g~~~-~~~~~~~~~Di~---t 289 (439)
T 2oat_A 215 LERALQDPNVA-AFMVEPIQGEAGVVVPDPGYLMGVRELCTRHQVLFIADEIQTGLARTGRWL-AVDYENVRPDIV---L 289 (439)
T ss_dssp HHHHTTSTTEE-EEEECSSBTTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSS-GGGGGTCCCSEE---E
T ss_pred HHHHhCCCCEE-EEEEECCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCccCCcch-hHHHhCCCCcEE---E
Confidence 999984 4555 455566 567896 5799999999999999999999999998765555322 122222222232 8
Q ss_pred CccccCCCC-ceEEEEEeeCCCCCCChHHHHHHHHhh-ccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHH
Q 014936 243 LSKRWIVPG-WRLGWFVTTDPCGMFRKPKVVERMKKY-FDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICY 320 (415)
Q Consensus 243 ~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~ 320 (415)
+||.++ +| +|+||+++++ ++++.+... ...+++.+++++.++.++|+...+ ++..++++++++++.
T Consensus 290 ~sK~l~-~G~~~~G~v~~~~--------~~~~~l~~~~~~~t~~~~~~~~aaa~aal~~~~~---~~~~~~~~~~~~~l~ 357 (439)
T 2oat_A 290 LGKALS-GGLYPVSAVLCDD--------DIMLTIKPGEHGSTYGGNPLGCRVAIAALEVLEE---ENLAENADKLGIILR 357 (439)
T ss_dssp ECGGGG-TTSSCCEEEEECH--------HHHTTSCTTSSCCSSTTCHHHHHHHHHHHHHHHH---TTHHHHHHHHHHHHH
T ss_pred eccccc-CCCCCeEEEEECH--------HHHhccCCCCcccCCCcCHHHHHHHHHHHHHHhh---hhHHHHHHHHHHHHH
Confidence 999976 58 9999999965 566655443 223456788888888888864211 256788889999999
Q ss_pred HHhhcCCCCcCC-CCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEee--CChhhHHHH
Q 014936 321 NKIKEIPCISCP-HKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFA--VDPYSLEEC 397 (415)
Q Consensus 321 ~~l~~~~~~~~~-~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~--~~~~~l~~~ 397 (415)
+.|+++ ++..+ ..+..|.++|+.++... + .+..++...++ ++||.+.|+. .+++|++++ .++++++++
T Consensus 358 ~~L~~l-~~~~~~~~~~~g~~~~v~l~~~~--~-~~~~~l~~~l~-~~Gv~v~~~~----~~~iRi~~~~~~t~e~i~~~ 428 (439)
T 2oat_A 358 NELMKL-PSDVVTAVRGKGLLNAIVIKETK--D-WDAWKVCLRLR-DNGLLAKPTH----GDIIRFAPPLVIKEDELRES 428 (439)
T ss_dssp HHHTTS-CTTTEEEEEEETTEEEEEECCCS--S-CCHHHHHHHHH-HTTEECCBSS----SSEEEECCCTTCCHHHHHHH
T ss_pred HHHHHh-cCCCcEEEEeeeeEEEEEEecCc--c-HHHHHHHHHHH-HCCeEEecCC----CCEEEEECccCCCHHHHHHH
Confidence 999887 44321 13446778888886421 0 13566777765 5699998853 579999874 789999999
Q ss_pred HHHHHHHHHH
Q 014936 398 LDRIKSFYQR 407 (415)
Q Consensus 398 l~~l~~~~~~ 407 (415)
+++|++++++
T Consensus 429 l~~l~~~l~~ 438 (439)
T 2oat_A 429 IEIINKTILS 438 (439)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHHHh
Confidence 9999988753
No 147
>3l44_A Glutamate-1-semialdehyde 2,1-aminomutase 1; alpha beta class, PLP-dependent transferase-like, bacillus A csgid, porphyrin biosynthesis; HET: LLP; 2.05A {Bacillus anthracis} SCOP: c.67.1.0
Probab=99.97 E-value=8.9e-31 Score=251.01 Aligned_cols=344 Identities=14% Similarity=0.042 Sum_probs=225.1
Q ss_pred cCcceeEecccCCCCCCCCC-CcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHH
Q 014936 33 NEKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQ 111 (415)
Q Consensus 33 ~~~~~i~l~~g~~~~~~~~~-~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~ 111 (415)
+++.++||..+..... ++ .+|.+++++.+++.......|+. ....+|++.+++++ + .++++++++|+++
T Consensus 53 ~g~~ylD~~~~~~~~~--lG~~~p~v~~a~~~~~~~~~~~~~~~-~~~~~l~~~la~~~------~-~~~~v~~~~sGse 122 (434)
T 3l44_A 53 DGNKYIDYLAAYGPII--TGHAHPHITKAITTAAENGVLYGTPT-ALEVKFAKMLKEAM------P-ALDKVRFVNSGTE 122 (434)
T ss_dssp TCCEEEECCGGGTTCS--SCBTCHHHHHHHHHHHHHCSCCSSCC-HHHHHHHHHHHHHC------T-TCSEEEEESSHHH
T ss_pred CCCEEEECCCchhccc--cCCCCHHHHHHHHHHHHhCcCCCCCC-HHHHHHHHHHHHhC------C-CCCEEEEeCchHH
Confidence 4778999998864322 33 58999999999887654444554 45567777777775 2 5789999999999
Q ss_pred HHHHHHHHhcC--CCCEEEEcCCCCcchHHHHHhCCC-eEEEeeccCCCCC------------CCChhHHHhhcCC--Cc
Q 014936 112 AIDVAMALLSR--PGANILLPRPGFPIYELSAAFRHI-EVRHFDLLPDKGW------------EVDLDDIESLADQ--NT 174 (415)
Q Consensus 112 al~~~~~~l~~--~gd~vi~~~p~y~~~~~~~~~~g~-~~~~~~~~~~~~~------------~~~~~~l~~~~~~--~~ 174 (415)
+++.+++.+.. ++++|++.+|+|+++...+...+. ....+......+. -.|+++|+++++. ..
T Consensus 123 a~~~ai~~a~~~~~~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~ 202 (434)
T 3l44_A 123 AVMTTIRVARAYTGRTKIMKFAGCYHGHSDLVLVAAGSGPSTLGTPDSAGVPQSIAQEVITVPFNNVETLKEALDKWGHE 202 (434)
T ss_dssp HHHHHHHHHHHHHCCCEEEEETTCCCCSSGGGGBC-------CCCBSSTTCCHHHHTTEEEECTTCHHHHHHHHHHHGGG
T ss_pred HHHHHHHHHHHhhCCCEEEEEcCccCCCcHHHHhhcCCcccccCCCCcCCCCCcCCCceEecCcccHHHHHHHHHhCCCC
Confidence 99999988764 678999999999987655443322 1111111000000 0178999988863 34
Q ss_pred eEEEecCCC-CccccCC-CHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCc
Q 014936 175 VALVIINPG-NPCGNVY-SYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGW 252 (415)
Q Consensus 175 ~~v~i~~p~-nptG~~~-~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~ 252 (415)
.++++++|+ |++|.+. +.+.+++|.++|++||+++|+||+|.++ ..+... ....++...+ +.|+||.++ +|+
T Consensus 203 ~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~illI~DEv~~g~-~~g~~~-~~~~~~~~~d---i~t~sK~~~-~G~ 276 (434)
T 3l44_A 203 VAAILVEPIVGNFGIVEPKPGFLEKVNELVHEAGALVIYDEVITAF-RFMYGG-AQDLLGVTPD---LTALGKVIG-GGL 276 (434)
T ss_dssp EEEEEECSSBCTTSCBCCCTTHHHHHHHHHHTTTCEEEEECTTTTT-TSSSSC-HHHHHTCCCS---EEEEEGGGG-TTS
T ss_pred EEEEEEcCCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccce-eccccH-HHHHcCCCCC---eeehhhhhc-CCc
Confidence 456666664 5566654 8899999999999999999999999987 444321 1222222222 347899986 799
Q ss_pred eEEEEEeeCCCCCCChHHHHHHHHhh----ccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhh----
Q 014936 253 RLGWFVTTDPCGMFRKPKVVERMKKY----FDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIK---- 324 (415)
Q Consensus 253 r~G~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~---- 324 (415)
|+||+++++ ++++.+... ...+++.+++++.++.++|+...+ ++..++++++++++.+.|+
T Consensus 277 ~iG~~~~~~--------~i~~~~~~~~~~~~~~t~~~~~~a~aaa~aal~~~~~---~~~~~~~~~~~~~l~~~L~~~~~ 345 (434)
T 3l44_A 277 PIGAYGGKK--------EIMEQVAPLGPAYQAGTMAGNPASMASGIACLEVLQQ---EGLYEKLDELGATLEKGILEQAA 345 (434)
T ss_dssp SCEEEEECH--------HHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHHHHTS---TTHHHHHHHHHHHHHHHHHHHHH
T ss_pred CeeeEEEcH--------HHHHhhccCCCcccCCCCCcCHHHHHHHHHHHHHHHc---ccHHHHHHHHHHHHHHHHHHHHH
Confidence 999998865 677666542 223567888999888888763211 2333444444444444444
Q ss_pred cCCCCcCCCCCCCceEEEEecCccccC--------CCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEeeCChhhHHH
Q 014936 325 EIPCISCPHKPEGSMAVMLKLNLSLLD--------DIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFAVDPYSLEE 396 (415)
Q Consensus 325 ~~~~~~~~~~p~~g~~~~~~l~~~~~~--------~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~~~l~~ 396 (415)
.++.+. . .+..|.++++.+...... +.....++...+ .++||.+.|+. .+.+|+++..+++++++
T Consensus 346 ~~~~~~-~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~Gv~v~~~~----~~~~rl~~~~t~e~i~~ 418 (434)
T 3l44_A 346 KHNIDI-T-LNRLKGALTVYFTTNTIEDYDAAQDTDGEMFGKFFKLM-LQEGVNLAPSK----YEAWFLTTEHTKEDIEY 418 (434)
T ss_dssp HTTCCE-E-EEEETTEEEEEESSSCCCSHHHHHHSCHHHHHHHHHHH-HHTTEECCSST----TCCEECCTTCCHHHHHH
T ss_pred hCCCCE-E-EEeeccEEEEEEecCcccchhhccccCHHHHHHHHHHH-HHCCeEEeecC----CCcEEEecccCHHHHHH
Confidence 343222 2 345577777766421110 000124455555 56699999875 35789988889999999
Q ss_pred HHHHHHHHHHHHHH
Q 014936 397 CLDRIKSFYQRHAK 410 (415)
Q Consensus 397 ~l~~l~~~~~~~~~ 410 (415)
++++|+++++++.+
T Consensus 419 ~l~~l~~~l~~~~~ 432 (434)
T 3l44_A 419 TIEAVGRAFAALAD 432 (434)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh
Confidence 99999999987654
No 148
>1ax4_A Tryptophanase; tryptophan biosynthesis, tryptophan indole-lyase, pyridoxal 5'-phosphate, monovalent cation binding site; HET: LLP; 2.10A {Proteus vulgaris} SCOP: c.67.1.2
Probab=99.97 E-value=9.2e-31 Score=253.35 Aligned_cols=330 Identities=15% Similarity=0.144 Sum_probs=222.4
Q ss_pred HHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcC----CCCE---E
Q 014936 55 HVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSR----PGAN---I 127 (415)
Q Consensus 55 ~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~----~gd~---v 127 (415)
+.+++++.+.+..+. ..|++..+..++|+++++++ ..+++++|+|+++|+.+++.++.+ +||+ |
T Consensus 55 ~~v~~a~~~~~~~~~-~~y~~~~~~~~l~~~la~~~--------~~~~v~~t~ggt~A~~~al~~~~~~~~~~Gd~~~~v 125 (467)
T 1ax4_A 55 NAMSDHQWAAMITGD-EAYAGSRNYYDLKDKAKELF--------NYDYIIPAHQGRGAENILFPVLLKYKQKEGKAKNPV 125 (467)
T ss_dssp CCEEHHHHHHHHTCC-CCSSSCHHHHHHHHHHHHHH--------CCCEEEEESSHHHHHHHHHHHHHHHHHHTTCCSSCE
T ss_pred HHHHHHHHHHHhhcc-cccccCccHHHHHHHHHHHc--------CCCcEEEcCCcHHHHHHHHHHHHHhhccCCCccceE
Confidence 567777777665443 36777678899999999998 347999999999999999999988 9998 9
Q ss_pred EEcCCCCcchHHHHHhCCCeEEEeeccC---C-----CCCCCChhHHHhhcCC----CceEEEecCCCCcc-ccCCCHHH
Q 014936 128 LLPRPGFPIYELSAAFRHIEVRHFDLLP---D-----KGWEVDLDDIESLADQ----NTVALVIINPGNPC-GNVYSYQH 194 (415)
Q Consensus 128 i~~~p~y~~~~~~~~~~g~~~~~~~~~~---~-----~~~~~~~~~l~~~~~~----~~~~v~i~~p~npt-G~~~~~~~ 194 (415)
+++.+.|..+...+...|.++..++... . .++.+|+++|++++++ ++++|++++|+||+ |.+++.++
T Consensus 126 iv~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~~~~vi~~~~~np~gG~~~~~~~ 205 (467)
T 1ax4_A 126 FISNFHFDTTAAHVELNGCKAINIVTEKAFDSETYDDWKGDFDIKKLKENIAQHGADNIVAIVSTVTCNSAGGQPVSMSN 205 (467)
T ss_dssp EEESSCCHHHHHHHHHTTCEEEECBCGGGGCTTSCCTTTTCBCHHHHHHHHHHHCGGGEEEEEEESSBTTTTSBCCCHHH
T ss_pred EEeccccchhhHHHhccCCceecccccccccccccCCcccccCHHHHHHHHHhcCCCCeeEEEEeccccCCCccCCChhH
Confidence 9986666676777888898887665421 1 1346899999998864 68899999999999 89999999
Q ss_pred HHHHHHHHhhcCcEEEEccccCC-c---------ccCCCCccccc-ccCCCCCeEEEccCccccCCC-CceEEEEEeeCC
Q 014936 195 LQKLAETANKLKTLVIADEVYGH-L---------VFGDKPFVPMG-VFGSTVPILTLGSLSKRWIVP-GWRLGWFVTTDP 262 (415)
Q Consensus 195 l~~i~~~~~~~~~~li~De~~~~-~---------~~~~~~~~~~~-~~~~~~~~i~~~s~sK~~~~~-G~r~G~~~~~~~ 262 (415)
+++|+++|++||+++|+|+++.. . .+.+.....+. ....... +++.|+||.++++ | |+++.+++
T Consensus 206 l~~i~~la~~~gi~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d-~~~~s~sK~~g~~~G---g~~~~~d~ 281 (467)
T 1ax4_A 206 LKEVYEIAKQHGIFVVMDSARFCENAYFIKARDPKYKNATIKEVIFDMYKYAD-ALTMSAKKDPLLNIG---GLVAIRDN 281 (467)
T ss_dssp HHHHHHHHHHHTCCEEEECTTHHHHHHHHHHHCGGGTTCCHHHHHHHHGGGCS-EEEEETTSTTCCSSC---EEEEESSC
T ss_pred HHHHHHHHHHcCCEEEEEchhhhhcchhccccccccCCCchhhhhhhhccccc-eEEEeccccCCCCcc---eEEEeCCH
Confidence 99999999999999999998654 1 12222111111 0001111 4567999998765 4 67766532
Q ss_pred CCCCChHHHHHHHHhhcc------ccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCC
Q 014936 263 CGMFRKPKVVERMKKYFD------ILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPE 336 (415)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~ 336 (415)
. ++++.+..... .....+.....++...++...+ ++..++..++++++.+.|++ +++. +..|.
T Consensus 282 ~------~l~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~---~~~~~~~~~~~~~l~~~L~~-~~~~-~~~~~ 350 (467)
T 1ax4_A 282 E------EIFTLARQRCVPMEGFVTYGGLAGRDMAAMVQGLEEGTE---EEYLHYRIGQVKYLGDRLRE-AGIP-IQYPT 350 (467)
T ss_dssp H------HHHHHHHHHHHHHTCSTTTTTCCHHHHHHHHHHHHHTTC---HHHHHHHHHHHHHHHHHHHH-TTCC-BCSSC
T ss_pred H------HHHHHHHhhccccccccccCCccchHHHHHHHHHHHhhh---hhHHHHHHHHHHHHHHHHHh-CCCC-cccCC
Confidence 0 35555443311 1112232233333323432211 11223334566778888877 3777 44788
Q ss_pred CceEEEEecCcc--ccC-CCCCHHHHHHHHHhhcCeEEEc-CCCC-------C-----CCCeEEEEee---CChhhHHHH
Q 014936 337 GSMAVMLKLNLS--LLD-DIIDDIDFCFKLAKEESVIILP-GTAV-------G-----LKNWLRVTFA---VDPYSLEEC 397 (415)
Q Consensus 337 ~g~~~~~~l~~~--~~~-~~~~~~~~~~~ll~~~gi~v~~-g~~~-------~-----~~~~iRi~~~---~~~~~l~~~ 397 (415)
+++++|+++... ... ...+..++...++.++||.+.| |..+ + ..+++||++. +++++++++
T Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gv~v~~~g~~~~~~~~~~g~~~~~~~~~iRls~~~~~~t~e~i~~~ 430 (467)
T 1ax4_A 351 GGHAVFVDCKKLVPQIPGDQFPAQAVINALYLESGVRAVEIGSFLLGRDPATGEQKHADMEFMRLTIARRVYTNDHMDYI 430 (467)
T ss_dssp CSSEEEEESTTTCTTSCGGGCHHHHHHHHHHHHHCEECEEESHHHHCBCTTTCSBCCCSCCEEEEECCTTSSCHHHHHHH
T ss_pred CceEEEEehhhhccccccCCCCHHHHHHHHHHhcCceeeecCccccccccccccccccccceEEEecccccCCHHHHHHH
Confidence 899999883110 000 0013566777775788999998 5432 1 1379999996 689999999
Q ss_pred HHHHHHHHHHH
Q 014936 398 LDRIKSFYQRH 408 (415)
Q Consensus 398 l~~l~~~~~~~ 408 (415)
+++|++++++.
T Consensus 431 ~~~l~~~~~~~ 441 (467)
T 1ax4_A 431 ADALIGLKEKF 441 (467)
T ss_dssp HHHHHTTHHHH
T ss_pred HHHHHHHHHhh
Confidence 99999988763
No 149
>3lws_A Aromatic amino acid beta-eliminating lyase/threonine aldolase; structural genomics, joint center for structural genomics, JCSG; HET: LLP MSE; 2.00A {Exiguobacterium sibiricum}
Probab=99.97 E-value=3.8e-31 Score=247.00 Aligned_cols=315 Identities=10% Similarity=0.022 Sum_probs=213.7
Q ss_pred HHHHHHHHHHHhc----CCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCC--EEE
Q 014936 55 HVATEAVAEALLS----EKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGA--NIL 128 (415)
Q Consensus 55 ~~~~~a~~~~~~~----~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd--~vi 128 (415)
|.+.+++++.+.. .....|++..+..+|++.++++++ .+..++++|+++++.+++.++.++|| .|+
T Consensus 21 p~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~l~~~la~~~~--------~~~~i~~~~G~~a~~~al~~~~~~gd~~~vi 92 (357)
T 3lws_A 21 KRNVGVLKTAFAAVADEMASDQYGTGAIIEPFEQKFADVLG--------MDDAVFFPSGTMAQQVALRIWSDETDNRTVA 92 (357)
T ss_dssp CCBHHHHHHHHTTSCTTCBCEETTEETTHHHHHHHHHHHHT--------CSEEEEESCHHHHHHHHHHHHHHHHTCCEEE
T ss_pred CCCHHHHHHHHHHhhcccCcccccCChHHHHHHHHHHHHhC--------CCcEEEecCcHHHHHHHHHHHhhcCCCcEEE
Confidence 3344445444442 123467776788999999999983 23446668888999999999988888 677
Q ss_pred EcCCCCcchHH---HHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCcc-ccCCCHHHHHHHHHHHhh
Q 014936 129 LPRPGFPIYEL---SAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPC-GNVYSYQHLQKLAETANK 204 (415)
Q Consensus 129 ~~~p~y~~~~~---~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~npt-G~~~~~~~l~~i~~~~~~ 204 (415)
++.++|..... .....|+++..++. .++.+|+++++++. +++++++++|+||| |.+++.+++++|+++|++
T Consensus 93 ~~~~~~~~~~~~~~~~~~~g~~~~~v~~---~~~~~d~~~l~~~~--~~~~v~~~~p~np~~G~~~~~~~l~~i~~~~~~ 167 (357)
T 3lws_A 93 YHPLCHLEIHEQDGLKELHPIETILVGA---ADRLMTLDEIKALP--DIACLLLELPQREIGGVAPAFSELETISRYCRE 167 (357)
T ss_dssp ECTTCHHHHSSTTHHHHHSSCEEEECSC---TTSCCCHHHHHTCC--SCSEEEEESSBGGGTSBCCCHHHHHHHHHHHHH
T ss_pred ecccceeeeeccchhhhccCcEEEEecC---CCCCcCHHHHhcCc--CcceEEEEcccccCCceeCCHHHHHHHHHHHHH
Confidence 77776654333 35566888887763 34568999999884 38899999999998 999999999999999999
Q ss_pred cCcEEEEccccCCcc--cCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhhcc-c
Q 014936 205 LKTLVIADEVYGHLV--FGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFD-I 281 (415)
Q Consensus 205 ~~~~li~De~~~~~~--~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-~ 281 (415)
||+++|+|++|.... +.+.....+. ...+ +++.|+||+|+.++. ||+++++ ++++.+..... .
T Consensus 168 ~~~~li~D~a~~~~~~~~~~~~~~~~~--~~~d--~~~~s~sK~~~~~~g--g~~~~~~--------~~~~~~~~~~~~~ 233 (357)
T 3lws_A 168 RGIRLHLDGARLFEMLPYYEKTAAEIA--GLFD--SIYISFYKGLGGIAG--AILAGPA--------AFCQTARIWKRRY 233 (357)
T ss_dssp TTCEEEEEETTHHHHHHHHTCCHHHHH--TTSS--EEEEESSSTTCCSSC--EEEEECH--------HHHHHHHHHHHHT
T ss_pred cCCEEEEECchhhhhhhhcCCChHHHH--hcCC--EEEEeccccCCCCce--EEEEcCH--------HHHHHHHHHHHHh
Confidence 999999999986211 1122221221 1111 447899999844332 8888754 67777765432 1
Q ss_pred c--CCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCccccCCCCCHHHH
Q 014936 282 L--GDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDF 359 (415)
Q Consensus 282 ~--~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~ 359 (415)
. .......+.++...|+. +. +..+++.++++++.+.|+++|++.+...|.+++|+|++++.... .+..++
T Consensus 234 ~~~~~~~~~~~~~~~~~l~~----~~-~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~---~~~~~~ 305 (357)
T 3lws_A 234 GGDLISLYPYIVSADYYYEL----RK-DRMGQYYEQAKQLAEQFNALPGVHTTPEVPVSNMFHLHFDGQAA---DISPKL 305 (357)
T ss_dssp TCCCSCCHHHHHHHHHHHHH----HT-TCHHHHHHHHHHHHHHHHTSTTEEEESSSCSSSEEEEEEESCHH---HHHHHH
T ss_pred cCCcccchHHHHHHHHHHHH----HH-HHHHHHHHHHHHHHHHHHhCCCCeeccCCCcceEEEEEecCChH---HHHHHH
Confidence 1 11122233333344432 22 23344677888999999999888842367788999998864110 013344
Q ss_pred HHHHHhhcCeEEEcCCCCCC-CCeEEEEee-----CChhhHHHHHHHHHHHH
Q 014936 360 CFKLAKEESVIILPGTAVGL-KNWLRVTFA-----VDPYSLEECLDRIKSFY 405 (415)
Q Consensus 360 ~~~ll~~~gi~v~~g~~~~~-~~~iRi~~~-----~~~~~l~~~l~~l~~~~ 405 (415)
...|.++||.+.||..+.. ..++|++++ .+.+++++++++|.+++
T Consensus 306 -~~~l~~~Gi~v~~g~~~~~~~~~~r~~i~~~~~~~~~~~l~~al~~l~~al 356 (357)
T 3lws_A 306 -EQVQEETGLGFVGYLVDKDGYCSTEISVGDAYGELDQQTRDAGFARLRQAF 356 (357)
T ss_dssp -HHHHHHHCEESCSCCEECSSEEEEEEEBCTTGGGSCHHHHHHHHHHHHHHC
T ss_pred -HHHHHhcCeEEecccccCCCceEEEEEecchhhhcCHHHHHHHHHHHHHhc
Confidence 4455778999999976652 238999985 46789999999988764
No 150
>3mc6_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxyl phosphate; HET: LLP; 3.15A {Saccharomyces cerevisiae}
Probab=99.97 E-value=8.7e-30 Score=248.29 Aligned_cols=330 Identities=15% Similarity=0.118 Sum_probs=241.2
Q ss_pred CCcHHHHHHHHHHHhcC---CCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcC-----C
Q 014936 52 HTTHVATEAVAEALLSE---KFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSR-----P 123 (415)
Q Consensus 52 ~~~~~~~~a~~~~~~~~---~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~-----~ 123 (415)
..++.+.+++.+.+... ....|....+..++++.+++++.+.+|...+++++++++|+++++.+++.++.+ +
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~~~~ggt~a~~~a~~a~~~~~~~~~ 154 (497)
T 3mc6_A 75 HGGDDLIHLQTIAYEKYCVANQLHPDVFPAVRKMESEVVSMVLRMFNAPSDTGCGTTTSGGTESLLLACLSAKMYALHHR 154 (497)
T ss_dssp CCCHHHHHHHHHHHHHTSSCBTTCTTTCHHHHHHHHHHHHHHHHHTTCCTTTCCEEEESSHHHHHHHHHHHHHHHHHHHS
T ss_pred CCchHHHHHHHHHHHHHhhcCCCCcccChHHHHHHHHHHHHHHHHhCCCCCCCeEEEcCcHHHHHHHHHHHHHHHHHhcC
Confidence 34577888887776542 223455556778999999999998888766688999999999999999999864 4
Q ss_pred C---CEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHH
Q 014936 124 G---ANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAE 200 (415)
Q Consensus 124 g---d~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~ 200 (415)
| |+|+++.++|.++...++..|++++.++.++ +++.+|+++|++++++++++|++++|+||||.+.+ +++|++
T Consensus 155 g~~~~~Vi~~~~~h~~~~~~~~~~G~~~~~v~~~~-~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~---l~~i~~ 230 (497)
T 3mc6_A 155 GITEPEIIAPVTAHAGFDKAAYYFGMKLRHVELDP-TTYQVDLGKVKKFINKNTVLLVGSAPNFPHGIADD---IEGLGK 230 (497)
T ss_dssp CCSSCEEEEETTSCHHHHHHHHHSCCEEEEECBCT-TTCSBCTTTTGGGCCSSEEEEEEETTCTTTCCCCS---CTTTTT
T ss_pred CCCCceEEEeCCccHHHHHHHHHcCCeEEEEecCc-ccCcCCHHHHHHHHhhCCEEEEEECCCCCCCcCCC---HHHHHH
Confidence 6 8999999999999999999999999999864 35679999999999999999999999999999955 678888
Q ss_pred HHhhcCcEEEEccccCCcccC-----CCCcc-cccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHHH
Q 014936 201 TANKLKTLVIADEVYGHLVFG-----DKPFV-PMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVER 274 (415)
Q Consensus 201 ~~~~~~~~li~De~~~~~~~~-----~~~~~-~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~ 274 (415)
+|+++|+++|+|++|+.+... +.+.. ++. .......+++.|++|. +.+|.++||+++++ +....
T Consensus 231 la~~~g~~livD~a~~~~~~~f~~~~~~~~~~~~~-~~~~g~d~~~~s~~K~-l~~~~~~g~~~~~~--------~~~~~ 300 (497)
T 3mc6_A 231 IAQKYKLPLHVDSCLGSFIVSFMEKAGYKNLPLLD-FRVPGVTSISCDTHKY-GFAPKGSSVIMYRN--------SDLRM 300 (497)
T ss_dssp HHHHTTCCEEEETTTTHHHHGGGTTTTCCSCCCCS-TTSTTCCEEEEETTTT-TCCCSSCEEEECSS--------HHHHT
T ss_pred HHHHhCCEEEEECcchhhhhhhhhhhcccCCcccc-ccCCCCcEEEECchhh-cCCCCCceeEEecC--------HHHHh
Confidence 899999999999999865421 11111 111 1111224777899997 57788899999876 23322
Q ss_pred HHhhcccc------------CCch---hHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhc-CCCCcCCCCCCCc
Q 014936 275 MKKYFDIL------------GDPA---TFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKE-IPCISCPHKPEGS 338 (415)
Q Consensus 275 ~~~~~~~~------------~~~~---~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~~~~~~~~~p~~g 338 (415)
........ ++.+ ..++.++...+. ...+++..++..++++++.+.|++ +|++.++..|..+
T Consensus 301 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~a~~aal~~l~---~~~~~~~~~~~~~~~~~l~~~L~~~~~g~~~~~~~~~~ 377 (497)
T 3mc6_A 301 HQYYVNPAWTGGLYGSPTLAGSRPGAIVVGCWATMVNMG---ENGYIESCQEIVGAAMKFKKYIQENIPDLDIMGNPRYS 377 (497)
T ss_dssp TTSCCBTTCTTSCBCCSSSCSSCBHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHSCTTCEECSCCCSS
T ss_pred hhhcccccccCCCcCCcCcccCCcchhHHHHHHHHHHHh---HHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEecCCCee
Confidence 21111100 0111 233445544443 366788889999999999999998 7898854344444
Q ss_pred eEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEee-CChhhHHHHHHHHHHHHHHHH
Q 014936 339 MAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFA-VDPYSLEECLDRIKSFYQRHA 409 (415)
Q Consensus 339 ~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~-~~~~~l~~~l~~l~~~~~~~~ 409 (415)
++++..+. .+..++...+ .++||.+.++.. +..+|++++ .+++++++++++|++++++..
T Consensus 378 -~v~~~~~~------~~~~~l~~~L-~~~Gi~v~~~~~---~~~~ri~~~~~t~e~i~~~~~~L~~~l~~~~ 438 (497)
T 3mc6_A 378 -VISFSSKT------LNIHELSDRL-SKKGWHFNALQK---PVALHMAFTRLSAHVVDEICDILRTTVQELK 438 (497)
T ss_dssp -EEEEECTT------TTHHHHHHHH-HTTTCBCEECCS---SCCEEEECCTTTTCTHHHHHHHHHHHHHHHT
T ss_pred -EEEEeCCC------CCHHHHHHHH-HhCCEEEecCCC---CCeEEEEEeCCCHHHHHHHHHHHHHHHHHHH
Confidence 44444432 2456666666 556999877653 357899995 678999999999999988754
No 151
>3oks_A 4-aminobutyrate transaminase; ssgcid, transferase, seattle structural genomics center for infectious disease; HET: LLP; 1.80A {Mycobacterium smegmatis} PDB: 3r4t_A* 3q8n_A
Probab=99.97 E-value=1.1e-30 Score=251.14 Aligned_cols=352 Identities=15% Similarity=0.058 Sum_probs=228.0
Q ss_pred cCcceeEecccCCCCCCCCC-CcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHH
Q 014936 33 NEKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQ 111 (415)
Q Consensus 33 ~~~~~i~l~~g~~~~~~~~~-~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~ 111 (415)
+++.++||..|.+... ++ .+|.+++++.+++.... .|....+..+.++++++++.+..+. ...+++++|+|+++
T Consensus 59 ~g~~ylD~~~~~~~~~--lGh~~p~v~~A~~~~~~~~~--~~~~~~~~~~~~~~la~~l~~~~~~-~~~~~v~~~~sGse 133 (451)
T 3oks_A 59 DGNRLIDLGSGIAVTT--VGNSAPKVVEAVRSQVGDFT--HTCFMVTPYEGYVAVCEQLNRLTPV-RGDKRSALFNSGSE 133 (451)
T ss_dssp TSCEEEESSHHHHTCT--TCTTCHHHHHHHHHHHTTCS--CCTTTTSCCHHHHHHHHHHHHHSSC-CSSEEEEEESSHHH
T ss_pred CCCEEEEcCCCccccc--cCCCCHHHHHHHHHHHHhcc--cccCCccCCHHHHHHHHHHHHhCCc-CCCCEEEEeCcHHH
Confidence 4677899988743211 33 37999999999987542 3443345556777777777765542 13579999999999
Q ss_pred HHHHHHHHhcC--CCCEEEEcCCCCcchHHHHHhCCC--------------eEEEeeccC--------CCCCCC---Chh
Q 014936 112 AIDVAMALLSR--PGANILLPRPGFPIYELSAAFRHI--------------EVRHFDLLP--------DKGWEV---DLD 164 (415)
Q Consensus 112 al~~~~~~l~~--~gd~vi~~~p~y~~~~~~~~~~g~--------------~~~~~~~~~--------~~~~~~---~~~ 164 (415)
|++.+++.+.. .++.|++..++|+++...+...+. .+..++... .+.... +++
T Consensus 134 A~~~Alk~a~~~~g~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 213 (451)
T 3oks_A 134 AVENAVKIARSHTHKPAVVAFDHAYHGRTNLTMALTAKVMPYKDGFGPFAPEIYRAPLSYPFRDAEFGKELATDGELAAK 213 (451)
T ss_dssp HHHHHHHHHHHHHCCCEEEEETTCCCCSSHHHHHHCCCCTTTTTTCCSCCSSEEEECCCCHHHHGGGCTTTTTCHHHHHH
T ss_pred HHHHHHHHHHHhcCCCeEEEEcCCcCCccHHHHHhcCCCcccccCCCCCCCCcEEeCCCccccccccccccchhhHHHHH
Confidence 99999988753 348999999999987766544322 344444320 000001 233
Q ss_pred HHHhh----cCCCceEEEecCCCCccc--cCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeE
Q 014936 165 DIESL----ADQNTVALVIINPGNPCG--NVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPIL 238 (415)
Q Consensus 165 ~l~~~----~~~~~~~v~i~~p~nptG--~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i 238 (415)
.+++. +.+.+.++++++|.|++| ...+.+.+++|.++|++||+++|+||+|.++.+.+.. .....++...+++
T Consensus 214 ~~~~~l~~~~~~~~~aavi~ep~~~~gG~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~~-~~~~~~~~~pdi~ 292 (451)
T 3oks_A 214 RAITVIDKQIGADNLAAVVIEPIQGEGGFIVPADGFLPTLLDWCRKNDVVFIADEVQTGFARTGAM-FACEHEGIDPDLI 292 (451)
T ss_dssp HHHHHHHHHTCGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSS-SGGGGGTCCCSEE
T ss_pred HHHHHHHhhcCCCCEEEEEEcCCcCCCCccCCCHHHHHHHHHHHHHcCCEEEEEecccCCCccccc-hhhhhcCCCCCee
Confidence 33333 334667788888976665 3457778999999999999999999999987665542 2223333222233
Q ss_pred EEccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhh-ccccCCchhHHHHHHHHhhCCCcH-HHHHHHHHHHHHHH
Q 014936 239 TLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKY-FDILGDPATFIQAAVPSILQQPDE-VFFKKTLNLLKQSV 316 (415)
Q Consensus 239 ~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~a~~~~l~~~~~-~~~~~~~~~~~~~~ 316 (415)
||||.++. |+|+||+++++ ++++.+... ...+++.+++++.++.++|+...+ +..++..+..+..+
T Consensus 293 ---t~sK~l~~-G~~iG~v~~~~--------~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~ 360 (451)
T 3oks_A 293 ---VTAKGIAG-GLPLSAVTGRA--------EIMDSPHVSGLGGTYGGNPIACAAALATIETIESEGLVARAQQIEKIMK 360 (451)
T ss_dssp ---EECGGGGT-TSSCEEEEEEH--------HHHTCSCTTSBCCSSSSCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHH
T ss_pred ---eehhhhhC-CcceEEEEECH--------HHHhhhcCCCcCCCCCCCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHH
Confidence 88999865 89999999865 566666544 234567899999998888864211 22333333333344
Q ss_pred HHHHHHhhcCCCCcCCCCCCCceEEEEecCcccc--CCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEe--eCChh
Q 014936 317 DICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLL--DDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTF--AVDPY 392 (415)
Q Consensus 317 ~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~--~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~--~~~~~ 392 (415)
+.+.+.+.++|.+. . .+..|.++|+.+..... +......++...+ .++||.+.|+..|+ +++|+++ ..+++
T Consensus 361 ~~L~~~~~~~~~~~-~-~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~Gv~v~~~~~~~--~~iRi~~~~~~t~e 435 (451)
T 3oks_A 361 DRLGRLQAEDDRIG-D-VRGRGAMIAMELVKAGTTEPDADLTKALCAGA-HAAGVIVLSCGTYG--NVVRFLPPLSIGDD 435 (451)
T ss_dssp HHHHHHHHHCTTEE-E-EEEETTEEEEEEBSTTSCCBCHHHHHHHHHHH-HHTTEECEEECTTS--CEEEECCCTTCCHH
T ss_pred HHHHHHHhhCCCeE-E-EEEeeEEEEEEEecCccCCCCHHHHHHHHHHH-HhCCcEEecCCCCC--CEEEEECCCCCCHH
Confidence 44444444455444 2 34457788887732100 0001234455555 56799999976543 6899987 46899
Q ss_pred hHHHHHHHHHHHHHH
Q 014936 393 SLEECLDRIKSFYQR 407 (415)
Q Consensus 393 ~l~~~l~~l~~~~~~ 407 (415)
++++++++|++++++
T Consensus 436 ~i~~~l~~l~~~l~~ 450 (451)
T 3oks_A 436 LLNEGLDVLEEVLRG 450 (451)
T ss_dssp HHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHhh
Confidence 999999999988753
No 152
>3mad_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxal phosphate; HET: LLP; 2.00A {Symbiobacterium thermophilum} PDB: 3maf_A* 3mau_A* 3mbb_A*
Probab=99.97 E-value=7.4e-30 Score=249.61 Aligned_cols=309 Identities=14% Similarity=0.108 Sum_probs=229.1
Q ss_pred CCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcE--EEeCChHHHHHHHHHHhcCCC--------CEEEEcCCCCcchHHHH
Q 014936 72 GYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDV--FVTSGCTQAIDVAMALLSRPG--------ANILLPRPGFPIYELSA 141 (415)
Q Consensus 72 ~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i--~i~~g~~~al~~~~~~l~~~g--------d~vi~~~p~y~~~~~~~ 141 (415)
.|....+..++++.+++++.+.+|...+++++ ++|+|+++++..+++++.++| |+|+++.|+|.++...+
T Consensus 130 ~~~~~p~~~~le~~l~~~la~~~g~~~~~~~v~~~~t~ggt~a~~~al~a~~~~g~~~~g~~~d~Vi~~~~~~~~~~~~~ 209 (514)
T 3mad_A 130 HPDLWPSTAKFEAEVVAMTAHMLGGDAAGGTVCGTVTSGGTESLLLAMKTYRDWARATKGITAPEAVVPVSAHAAFDKAA 209 (514)
T ss_dssp CTTTCHHHHHHHHHHHHHHHHHTTGGGGTSCCEEEEESSHHHHHHHHHHHHHHHHHHHHCCSSCEEEEETTSCTHHHHHH
T ss_pred ccccChHHHHHHHHHHHHHHHHcCCCCccCCcceEEcCcHHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCccchHHHHHH
Confidence 44444566788888988888888866555788 999999999999999998766 89999999999999999
Q ss_pred HhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccC
Q 014936 142 AFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFG 221 (415)
Q Consensus 142 ~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~ 221 (415)
+..|++++.++.+. ++.+|+++|++++++++++|++++|+||||.+.+ +++|+++|+++|+++|+|++|+++.+.
T Consensus 210 ~~~G~~v~~v~~~~--~~~~d~~~Le~~i~~~~~~v~~~~~~nptG~~~~---l~~i~~la~~~~i~livDea~~~~~~~ 284 (514)
T 3mad_A 210 QYFGIKLVRTPLDA--DYRADVAAMREAITPNTVVVAGSAPGYPHGVVDP---IPEIAALAAEHGIGCHVDACLGGFILP 284 (514)
T ss_dssp HHHTCEEEEECBCT--TSCBCHHHHHHHCCTTEEEEEEETTCTTTCCCCC---HHHHHHHHHHHTCEEEEECTTTTTTHH
T ss_pred HHcCCeeEEeeeCC--CCCCCHHHHHHHhccCCEEEEEeCCCCCCccccC---HHHHHHHHHHhCCeEEEecccccccch
Confidence 99999999998864 5679999999999989999999999999999966 788888999999999999999987541
Q ss_pred -----CCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhhcc------------ccCC
Q 014936 222 -----DKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFD------------ILGD 284 (415)
Q Consensus 222 -----~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~ 284 (415)
+....++. .......+++.|++|. +.+|.++|++++++ +.......... ..++
T Consensus 285 ~~~~~g~~~~~~~-~~~~g~d~~~~s~~K~-l~~~~~~g~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~gs 354 (514)
T 3mad_A 285 WAERLGYPVPPFD-FRLEGVTSVSADTHKY-GYGAKGTSVILYRR--------PDLLHYQYFIAADWPGGLYFSPTFAGS 354 (514)
T ss_dssp HHHHTTCCCCCCS-TTSTTCCEEEECTTTT-TCCCSSCEEEEESS--------HHHHTTTCEEESSCTTCSEEESSSCSS
T ss_pred hHHhcCCCCCccc-ccCCCCcEEEECchhc-cCCCCCeEEEEEeC--------HHHhccccccccccCCCcccCCccCCC
Confidence 21111121 1112234778899998 56778899999876 22222111100 0112
Q ss_pred chh---HHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCccccCCCCCHHHHHH
Q 014936 285 PAT---FIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCF 361 (415)
Q Consensus 285 ~~~---~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~ 361 (415)
.+. ..+.++...+. ..++++..+++.++++++.+.|++++++..+ .+..+ ++++..+. .+..++..
T Consensus 355 ~~~~~~~a~~aal~~l~---~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~-~~~~~-~~~~~~~~------~~~~~l~~ 423 (514)
T 3mad_A 355 RPGALSATAWAAMLSLG---EEGYLDATRRILQAADRLKAGVRAIPSLKIL-GDPLW-VIAVASDE------LNIYQVME 423 (514)
T ss_dssp CCHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHTSTTCEES-SCCSS-EEEEECSS------SCHHHHHH
T ss_pred CchHHHHHHHHHHHHHh---HHHHHHHHHHHHHHHHHHHHHHhhCCCeEEe-CCCeE-EEEEeCCC------CCHHHHHH
Confidence 222 23334433342 4678889999999999999999998888843 44444 66665532 24666766
Q ss_pred HHHhhcCeEEEcCCCCCCCCeEEEEee---CChhhHHHHHHHHHHHHHHHHH
Q 014936 362 KLAKEESVIILPGTAVGLKNWLRVTFA---VDPYSLEECLDRIKSFYQRHAK 410 (415)
Q Consensus 362 ~ll~~~gi~v~~g~~~~~~~~iRi~~~---~~~~~l~~~l~~l~~~~~~~~~ 410 (415)
.+ .++||.+ +|..+ ++++|++++ ++++++++++++|++++++..+
T Consensus 424 ~L-~~~Gi~v-~g~~~--~~~~Ri~~~~~~~~~e~i~~~l~~L~~~l~~~~~ 471 (514)
T 3mad_A 424 EM-AGRGWRL-NGLHR--PPAFHVALTLRHTEPGVVDRFLADLQDAVAQVRA 471 (514)
T ss_dssp HH-HTTTCBC-EEETT--TTEEEEECCGGGGSTTHHHHHHHHHHHHHHHHHH
T ss_pred HH-HhcCCEe-ccCCC--CCeEEEEEecCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 66 4569987 44332 578999995 4579999999999999987654
No 153
>2c0r_A PSAT, phosphoserine aminotransferase; pyridoxal-5'-phosphate, pyridine serine biosynthesis, amino-acid biosynthesis, pyridoxal phosphate; HET: PLP; 1.2A {Bacillus circulans} SCOP: c.67.1.4 PDB: 1bt4_A* 1w3u_A*
Probab=99.97 E-value=5.1e-31 Score=246.63 Aligned_cols=325 Identities=13% Similarity=0.106 Sum_probs=224.3
Q ss_pred ceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCC--------CCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCC-c-EEE
Q 014936 36 KVISLAMGDPTVHSCFHTTHVATEAVAEALLSEK--------FNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPN-D-VFV 105 (415)
Q Consensus 36 ~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~--------~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~-~-i~i 105 (415)
.++.+..|. .++++.+++++.+.+.... ...|. .+..++++++.+.+++.+|. +++ + +++
T Consensus 4 ~~~l~~~~~------~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~la~~~g~--~~~~~~i~~ 73 (362)
T 2c0r_A 4 RAYNFNAGP------AALPLEVLERAQAEFVDYQHTGMSIMEMSHRG--AVYEAVHNEAQARLLALLGN--PTGYKVLFI 73 (362)
T ss_dssp CCEECCSSS------CCCCHHHHHHHHHTSSSSTTSSSCGGGSCTTS--HHHHHHHHHHHHHHHHHTTC--CSSEEEEEE
T ss_pred ceeeccCCC------CCCCHHHHHHHHHHHhhhhhcCccccccCCCc--HHHHHHHHHHHHHHHHHhCC--CCCcEEEEE
Confidence 356666663 6778999999998875310 01111 12345566666666666663 443 5 567
Q ss_pred eCChHHHHHHHHHHhcCCCCEEEEcCCCCcch--HHHHHhCCCeEEEeeccCCCCC--CCChhHHHhhcCCCceEEEecC
Q 014936 106 TSGCTQAIDVAMALLSRPGANILLPRPGFPIY--ELSAAFRHIEVRHFDLLPDKGW--EVDLDDIESLADQNTVALVIIN 181 (415)
Q Consensus 106 ~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~--~~~~~~~g~~~~~~~~~~~~~~--~~~~~~l~~~~~~~~~~v~i~~ 181 (415)
|+|+++++..++.+++++||+|++..+.++.. ...++..| +++.++.+++.++ .+|.++++ +++++++|++++
T Consensus 74 t~g~t~a~~~~~~~l~~~gd~vl~~~~~~~~~~~~~~~~~~g-~~~~v~~~~~~~~~~~~~~~~~~--i~~~t~~v~~~~ 150 (362)
T 2c0r_A 74 QGGASTQFAMIPMNFLKEGQTANYVMTGSWASKALKEAKLIG-DTHVAASSEASNYMTLPKLQEIQ--LQDNAAYLHLTS 150 (362)
T ss_dssp SSHHHHHHHHHHHHHCCTTCEEEEEECSHHHHHHHHHHHHHS-CEEEEEECGGGTTCSCCCGGGCC--CCTTEEEEEEES
T ss_pred CCCchHHHHHHHHhcCCCCCeEEEEecCcHhHHHHHHHHHhC-CeEEEecccccccccCCCHHHcc--cCCCcCEEEEeC
Confidence 89999999999999999999999887765543 35667789 9998887532223 34655544 677899999999
Q ss_pred CCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeC
Q 014936 182 PGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTD 261 (415)
Q Consensus 182 p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~ 261 (415)
|+||||..++ ++++| +|+++|+|++|+.+.. +..+... .+++.|+||+++++| +||+++++
T Consensus 151 ~~n~tG~~~~--~l~~i------~~~~vivD~a~~~~~~----~~~~~~~-----d~~~~s~~K~~g~~G--~G~l~~~~ 211 (362)
T 2c0r_A 151 NETIEGAQFK--AFPDT------GSVPLIGDMSSDILSR----PFDLNQF-----GLVYAGAQKNLGPSG--VTVVIVRE 211 (362)
T ss_dssp EETTTTEECS--SCCCC------TTSCEEEECTTTTTSS----CCCGGGC-----SEEEEETTTTTCCSS--CEEEEEEG
T ss_pred CcCccceecc--ccccc------CCCEEEEEChhhccCC----ccchhHC-----cEEEEeccccccCcC--cEEEEEcH
Confidence 9999999754 34554 7999999999987432 1222222 277789999998888 99999976
Q ss_pred CCCCCChHHHHHHHHh-------------hccccCCchhHHHHHHHHhhCCCcHH-HHHHHHHHHHHHHHHHHHHhhcCC
Q 014936 262 PCGMFRKPKVVERMKK-------------YFDILGDPATFIQAAVPSILQQPDEV-FFKKTLNLLKQSVDICYNKIKEIP 327 (415)
Q Consensus 262 ~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~a~~~~l~~~~~~-~~~~~~~~~~~~~~~l~~~l~~~~ 327 (415)
+ +++.+.. .....++++...+.++..+|+...+. .+++.+++++++++++.+.|++++
T Consensus 212 ~--------~~~~l~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~ 283 (362)
T 2c0r_A 212 D--------LVAESPKHLPTMLRYDTYVKNNSLYNTPPSFGIYMVNEVLKWIEERGGLEGVQQANRKKASLIYDAIDQSG 283 (362)
T ss_dssp G--------GSSSCCTTSCGGGCHHHHHHTTTCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHTST
T ss_pred H--------HHhhccccCchHHhHHHHhhccCcCCCchHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHcC
Confidence 3 2221111 11223567778888888888643222 678899999999999999999985
Q ss_pred CC-cCCCCC--CCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEee--CChhhHHHHHHHHH
Q 014936 328 CI-SCPHKP--EGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFA--VDPYSLEECLDRIK 402 (415)
Q Consensus 328 ~~-~~~~~p--~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~--~~~~~l~~~l~~l~ 402 (415)
++ .+...+ ..+.++++.++.. .+..++...| .++||.+.+|..+ .+++|||++ .++++++.+++.|+
T Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~L-~~~gi~~~~g~~~--~~~iRis~~~~~~~e~i~~l~~~l~ 355 (362)
T 2c0r_A 284 GFYRGCVDVDSRSDMNITFRLASE-----ELEKEFVKAS-EQEGFVGLKGHRS--VGGLRASIYNAVPYESCEALVQFME 355 (362)
T ss_dssp TSSEESSCGGGBCSSEEEEECSCH-----HHHHHHHHHH-HHTTEESCBCCTT--TCSEEEECCTTSCHHHHHHHHHHHH
T ss_pred CccccCCChHHcCCcEEEEEcCCc-----chHHHHHHHH-HHCCCeeccCCCC--CCEEEEECCCCCCHHHHHHHHHHHH
Confidence 35 522111 2345677777531 1345666654 6779998888765 468999996 47899999999999
Q ss_pred HHHHHH
Q 014936 403 SFYQRH 408 (415)
Q Consensus 403 ~~~~~~ 408 (415)
++++++
T Consensus 356 ~~~~~~ 361 (362)
T 2c0r_A 356 HFKRSR 361 (362)
T ss_dssp HHHHHH
T ss_pred HHHHhc
Confidence 887653
No 154
>3pj0_A LMO0305 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, lyase; HET: LLP MSE; 1.80A {Listeria monocytogenes}
Probab=99.97 E-value=4.5e-31 Score=246.73 Aligned_cols=328 Identities=13% Similarity=0.026 Sum_probs=222.7
Q ss_pred cceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHH
Q 014936 35 KKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAID 114 (415)
Q Consensus 35 ~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~ 114 (415)
-....++.+.+. ++++|.+++++.+.+. ...|++..+..++++.++++++ .+..++++|+++++.
T Consensus 13 ~~~~~~~~~~~~----~g~~p~v~~ai~~~~~---~~~~~~~~~~~~l~~~la~~~~--------~~~~i~~~~g~~a~~ 77 (359)
T 3pj0_A 13 TPYKLGGNGPRN----VGVLTEALQNIDDNLE---SDIYGNGAVIEDFETKIAKILG--------KQSAVFFPSGTMAQQ 77 (359)
T ss_dssp CSEESSSSSCCB----HHHHHHHTTTSCTTCB---CCBTTBSHHHHHHHHHHHHHHT--------CSEEEEESCHHHHHH
T ss_pred cchhhcCCCccc----cCCCHHHHHHHHhhcc---cCcccCCHHHHHHHHHHHHHhC--------CCcEEEeCCHHHHHH
Confidence 334445555421 4567888888877432 2356666678999999999983 233466688899999
Q ss_pred HHHHHhcCCCCE--EEEcCCCCcchH---HHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCcc-cc
Q 014936 115 VAMALLSRPGAN--ILLPRPGFPIYE---LSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPC-GN 188 (415)
Q Consensus 115 ~~~~~l~~~gd~--vi~~~p~y~~~~---~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~npt-G~ 188 (415)
+++.++.++||. |+++.++|.... ......|.+++.++. +++.+|+++++++ .++++++++++|+||+ |.
T Consensus 78 ~a~~~~~~~g~~~vvi~~~~~~~~~~~~~~~~~~~g~~~~~v~~---~~~~~d~~~l~~~-~~~~~~v~~~~p~n~~~G~ 153 (359)
T 3pj0_A 78 IALRIWADRKENRRVAYHPLSHLEIHEQDGLKELQQITPLLLGT---ANQLLTIDDIKSL-REPVSSVLIELPQREIGGQ 153 (359)
T ss_dssp HHHHHHHHHHTCCEEEECTTCHHHHSSTTHHHHHHCCEEEECSC---TTSCCCHHHHHTC-SSCCSEEEEESSBGGGTSB
T ss_pred HHHHHHHhcCCCcEEEEeccceeeehhcchHHHhcCceEEecCC---cCCCcCHHHHHhc-cCCceEEEEEecccCCCcc
Confidence 999999888886 555555554322 222456889888775 3457899999988 7789999999999998 79
Q ss_pred CCCHHHHHHHHHHHhhcCcEEEEccccCCccc--CCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCC
Q 014936 189 VYSYQHLQKLAETANKLKTLVIADEVYGHLVF--GDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMF 266 (415)
Q Consensus 189 ~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~--~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~ 266 (415)
+++.+++++|+++|++||+++|+|++|..+.. .+.....+. .... +++.|+||+++.++. ||++.++
T Consensus 154 ~~~~~~l~~l~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~---~~~d-~~~~s~sK~~~~~~g--g~~~~~~----- 222 (359)
T 3pj0_A 154 LPAFEELEKISEYCHEQGISLHLDGARLWEITPFYQKSAEEIC---ALFD-SVYVSFYKGIGGIAG--AILAGND----- 222 (359)
T ss_dssp CCCHHHHHHHHHHHHHHTCEEEEEETTCGGGHHHHTCCHHHHH---TTCS-EEEEESSSTTCCSSC--EEEEECH-----
T ss_pred cCCHHHHHHHHHHHHHcCCEEEEECcchhcchhhhCCCHHHhh---ccCC-EEEEeccccCCCcce--EEEECCH-----
Confidence 99999999999999999999999999876442 122211221 1112 455689998766532 7777654
Q ss_pred ChHHHHHHHHhhcc-ccCC--chhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEE
Q 014936 267 RKPKVVERMKKYFD-ILGD--PATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVML 343 (415)
Q Consensus 267 ~~~~~~~~~~~~~~-~~~~--~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~ 343 (415)
++++.++.... .... .......++...++. .. +..+++.++++.+.+.|+++|++.+...|..++++|+
T Consensus 223 ---~l~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~----~~-~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~ 294 (359)
T 3pj0_A 223 ---DFVQEAKIWKRRYGGDLISLYPYILSADYYFEK----RI-GKMAEYFEAAKGLAERFNSCSGVKTVPEVPVSNMFHV 294 (359)
T ss_dssp ---HHHHHHHHHHHHTTCCCSCCHHHHHHHHHHHHH----HG-GGHHHHHHHHHHHHHHHHTSTTEEEESSSCSSSEEEE
T ss_pred ---HHHHHHHHHHHHhCCCcchhHHHHHHHHHHHHH----HH-HHhHHHHHHHHHHHHHHhhCCCceeeccCCcceEEEE
Confidence 67877765421 1111 122222333334432 22 4445677888999999999888873235677888888
Q ss_pred ecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCC--CCeEEEEee-----CChhhHHHHHHHHHHH
Q 014936 344 KLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGL--KNWLRVTFA-----VDPYSLEECLDRIKSF 404 (415)
Q Consensus 344 ~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~--~~~iRi~~~-----~~~~~l~~~l~~l~~~ 404 (415)
+++.... .+.+.+.+.+.++||.+.||..|+. .+++|++++ .+.+++++++++|.+.
T Consensus 295 ~~~~~~~----~~~~~l~~~l~~~GV~v~~g~~~~~~~~~~~r~~i~~~~~~~~~e~l~~~l~~l~~~ 358 (359)
T 3pj0_A 295 YFENSAD----EIGAILTKIQDETGVGISGYLQEKSADVCAFEVSVGDAFAEIPAKNLELVFRCLEKE 358 (359)
T ss_dssp EESSCHH----HHHHHHHHHHHHHCEECCSCCEEEETTEEEEEEECCTTGGGSCHHHHHHHHHHHHHH
T ss_pred EecCccc----hhHHHHHHHHHhcCcEecCCccccCCCceEEEEEecCccccCCHHHHHHHHHHHHhc
Confidence 8764110 1233444455778999999987654 358999885 4678999999998764
No 155
>1ibj_A CBL, cystathionine beta-lyase; PLP-dependent enzyme, methionine biosynthesis, transsulfurat lyase; HET: PLP; 2.30A {Arabidopsis thaliana} SCOP: c.67.1.3
Probab=99.97 E-value=5.5e-30 Score=245.65 Aligned_cols=328 Identities=13% Similarity=0.131 Sum_probs=222.8
Q ss_pred CcceeEeccc-CCCCCCCCCCcHHHHHHHHHH---HhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCCh
Q 014936 34 EKKVISLAMG-DPTVHSCFHTTHVATEAVAEA---LLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGC 109 (415)
Q Consensus 34 ~~~~i~l~~g-~~~~~~~~~~~~~~~~a~~~~---~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~ 109 (415)
+..+++++.| +|+ +++++.+.++.... ........|+. .|.+ +++++++++.+..| .+++++++||
T Consensus 88 ~~~~i~l~~g~~~~----~~~~~~i~~a~~~~~~~~~~~~~~~Y~~-~g~~-~~~~l~~~la~~~g----~~~~i~~~sG 157 (464)
T 1ibj_A 88 STLLVNLDNKFDPF----DAMSTPLYQTATFKQPSAIENGPYDYTR-SGNP-TRDALESLLAKLDK----ADRAFCFTSG 157 (464)
T ss_dssp HHHHTCCCCSSCTT----CCSSCCCCCCSBCCCSSSSCCCSCSBTT-TCCH-HHHHHHHHHHHHHT----CSEEEEESSH
T ss_pred CCeEEECCCCCCCC----CCCCccHHhhhhhhhhcccccCCccccC-CCCH-HHHHHHHHHHHHhC----CCeEEEECCH
Confidence 3457888887 543 55566566555432 11122345663 4555 67777777776555 2478888888
Q ss_pred HHHHHHHHHHhcCCCCEEEEcCCCCcchHHH----HHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCc
Q 014936 110 TQAIDVAMALLSRPGANILLPRPGFPIYELS----AAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNP 185 (415)
Q Consensus 110 ~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~----~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~np 185 (415)
++++..++. ++++||+|+++.|+|+++... ++..|++++.++.+ |++++++++++++++|++++|+||
T Consensus 158 t~al~~~l~-~~~~Gd~Vi~~~~~y~~~~~~~~~~~~~~G~~v~~v~~~-------d~~~l~~~i~~~tk~v~l~~p~Np 229 (464)
T 1ibj_A 158 MAALSAVTH-LIKNGEEIVAGDDVYGGSDRLLSQVVPRSGVVVKRVNTT-------KLDEVAAAIGPQTKLVWLESPTNP 229 (464)
T ss_dssp HHHHHHHHT-TSCTTCEEEEESSCCHHHHHHHHHTSGGGTCEEEEECTT-------SHHHHHHHCCSSEEEEEECSSCTT
T ss_pred HHHHHHHHH-HhCCCCEEEEECCCchhHHHHHHHHHHHcCCEEEEeCCC-------CHHHHHHHhccCceEEEEeCCCCC
Confidence 999998885 779999999999999988754 46679999888752 799999999989999999999999
Q ss_pred cccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCC-CCceEEEEEeeCCCC
Q 014936 186 CGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIV-PGWRLGWFVTTDPCG 264 (415)
Q Consensus 186 tG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~-~G~r~G~~~~~~~~~ 264 (415)
||.+++ +++|+++|+++|+++|+||+|.... ...++. + +..+++.|+||.|+. +|+|+||+++++
T Consensus 230 tG~v~~---l~~i~~la~~~gi~livDea~~~g~----~~~~~~-~---~~div~~S~sK~~~g~~Gl~~G~l~~~~--- 295 (464)
T 1ibj_A 230 RQQISD---IRKISEMAHAQGALVLVDNSIMSPV----LSRPLE-L---GADIVMHSATKFIAGHSDVMAGVLAVKG--- 295 (464)
T ss_dssp TCCCCC---HHHHHHHHHTTTCEEEEECTTTCTT----TCCGGG-T---TCSEEEEETTTTTTCSSCCCCEEEEECS---
T ss_pred CCEeec---HHHHHHHHHHcCCEEEEECCCcccc----cCChhh-c---CCEEEEECCcccccCCCCCcEEEEEECh---
Confidence 999985 7888999999999999999997632 111222 2 345899999998765 489999999964
Q ss_pred CCChHHHHHHHHhhcc-ccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHH----------HhhcCCCCcCCC
Q 014936 265 MFRKPKVVERMKKYFD-ILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYN----------KIKEIPCISCPH 333 (415)
Q Consensus 265 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~----------~l~~~~~~~~~~ 333 (415)
+++++.+..... ..++.++..+.++...++.. ...+++..+......+++.+ .|+++|++.+.
T Consensus 296 ----~~l~~~l~~~~~~~g~~~~~~~~~a~~~al~~~-~~r~~~~~~~~~~l~~~l~~~~~v~~~~~~~L~~~p~~~~~- 369 (464)
T 1ibj_A 296 ----EKLAKEVYFLQNSEGSGLAPFDCWLCLRGIKTM-ALRIEKQQENARKIAMYLSSHPRVKKVYYAGLPDHPGHHLH- 369 (464)
T ss_dssp ----HHHHHHHHHHHHHTTCBCCHHHHHHHHHHHTTH-HHHHHHHHHHHHHHHHHHHTCTTCCEEECTTSTTSTTHHHH-
T ss_pred ----HHHHHHHHHHHHhcCCCCCHHHHHHHHhchhhH-HHHHHHHHHHHHHHHHHHHhCCCceEEECCCCCCCcchHHH-
Confidence 246677765532 34556788888888888642 12233332223333333322 23333444422
Q ss_pred CCC---CceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCC------------CC----------CC-CCeEEEEe
Q 014936 334 KPE---GSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGT------------AV----------GL-KNWLRVTF 387 (415)
Q Consensus 334 ~p~---~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~------------~~----------~~-~~~iRi~~ 387 (415)
.|. .|.++++.++. ......++.. |+..||.+++|. .+ +. ++++|+++
T Consensus 370 ~~~~~g~g~~~~~~l~~-----~~~~~~~~~~-L~~~gi~v~~G~~~sl~~~p~~~~~~~~~~~~~~~~g~~~~~iRlsv 443 (464)
T 1ibj_A 370 FSQAKGAGSVFSFITGS-----VALSKHLVET-TKYFSIAVSFGSVKSLISMPCFMSHASIPAEVREARGLTEDLVRISA 443 (464)
T ss_dssp TTTCSCCCSEEEEECSC-----HHHHHHHHHH-CSSSEECSCCCSSSCEEECTTTTTTCSCCSSSSSSSSCCTTCEEEEC
T ss_pred hccCCCCceEEEEEECC-----HHHHHHHHHh-cCcceEeecCCCCceeeecccccccccCCHHHHHhcCCCcCeEEEEe
Confidence 332 35678877741 0012234444 355788888875 11 22 47899999
Q ss_pred eCChhhHHHHHHHHHHHHHH
Q 014936 388 AVDPYSLEECLDRIKSFYQR 407 (415)
Q Consensus 388 ~~~~~~l~~~l~~l~~~~~~ 407 (415)
+. |++++++++|++++++
T Consensus 444 g~--edi~~li~~L~~al~~ 461 (464)
T 1ibj_A 444 GI--EDVDDLISDLDIAFKT 461 (464)
T ss_dssp CS--SCHHHHHHHHHHHHHS
T ss_pred CC--CCHHHHHHHHHHHHhh
Confidence 88 8999999999988753
No 156
>2c81_A Glutamine-2-deoxy-scyllo-inosose aminotransferase; SMAT, butirosin, aminoglycoside antibiotics; HET: PMP; 1.7A {Bacillus circulans} PDB: 2c7t_A*
Probab=99.97 E-value=9.9e-29 Score=235.60 Aligned_cols=319 Identities=15% Similarity=0.187 Sum_probs=224.3
Q ss_pred CcHHHHHHHHHHHhcCCCCCCCCCCC----cHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHh-cCCCCEE
Q 014936 53 TTHVATEAVAEALLSEKFNGYAPTAG----LPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALL-SRPGANI 127 (415)
Q Consensus 53 ~~~~~~~a~~~~~~~~~~~~y~~~~g----~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l-~~~gd~v 127 (415)
.++.+++++.+.+.......|++..| ..++++.+++++ | ++ ++++++++++++..++.++ .++||+|
T Consensus 14 ~~~~~~~a~~~~~~~~~~~~~~~~~g~~~l~~~l~~~la~~~----g--~~--~~i~~~~gt~al~~~~~~~~~~~gd~V 85 (418)
T 2c81_A 14 HSDRTRRKIEEVFQSNRWAISGYWTGEESMERKFAKAFADFN----G--VP--YCVPTTSGSTALMLALEALGIGEGDEV 85 (418)
T ss_dssp CCHHHHHHHHHHHHHTCCSTTSBCCSSCCHHHHHHHHHHHHH----T--CS--EEEEESCHHHHHHHHHHHTTCCTTCEE
T ss_pred CCHHHHHHHHHHHhcCCccccCcccCCHHHHHHHHHHHHHHh----C--CC--cEEEeCCHHHHHHHHHHHcCCCCcCEE
Confidence 47899999999987655444777667 455666666655 3 22 5777888899999999999 8999999
Q ss_pred EEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCc
Q 014936 128 LLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKT 207 (415)
Q Consensus 128 i~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~ 207 (415)
+++.|+|.++...++..|++++.+++++ +++.+|+++|++.+++++++|+++ ||||.. .++++|.++|+++|+
T Consensus 86 l~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~d~~~l~~~i~~~~~~v~~~---~~~G~~---~~~~~i~~~~~~~~~ 158 (418)
T 2c81_A 86 IVPSLTWIATATAVLNVNALPVFVDVEA-DTYCIDPQLIKSAITDKTKAIIPV---HLFGSM---ANMDEINEIAQEHNL 158 (418)
T ss_dssp EEESSSCTHHHHHHHHTTCEEEEECBCT-TTCSBCHHHHGGGCCTTEEEECCB---CCTTCC---CCHHHHHHHHHHTTC
T ss_pred EECCCccHhHHHHHHHcCCEEEEEecCC-CCCCcCHHHHHHhhCCCCeEEEEe---CCcCCc---ccHHHHHHHHHHCCC
Confidence 9999999999999999999999998854 356799999999998888887765 478987 568899999999999
Q ss_pred EEEEccccCCcc-cCCCCcccccccCCCCCeEEEccC--ccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhhcccc--
Q 014936 208 LVIADEVYGHLV-FGDKPFVPMGVFGSTVPILTLGSL--SKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDIL-- 282 (415)
Q Consensus 208 ~li~De~~~~~~-~~~~~~~~~~~~~~~~~~i~~~s~--sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 282 (415)
++|+|++|+.+. +++.. +..+. .+.+.|| ||.++. | |+||+++++ +++++.++......
T Consensus 159 ~li~D~a~~~~~~~~~~~---~~~~~----~~~~~s~s~~K~~~~-g-~~g~~~~~~-------~~l~~~~~~~~~~~~~ 222 (418)
T 2c81_A 159 FVIEDCAQSHGSVWNNQR---AGTIG----DIGAFSCQQGKVLTA-G-EGGIIVTKN-------PRLFELIQQLRADSRV 222 (418)
T ss_dssp EEEEECTTCTTCEETTEE---TTSSS----SEEEEECCTTSSSCS-S-SCEEEEESC-------HHHHHHHHHHHBTTEE
T ss_pred EEEEECcccccCccCCEe---ccccc----ceEEEeccCCcccCC-C-CeEEEEECC-------HHHHHHHHHHHHhCcc
Confidence 999999999876 54322 22222 1666777 999877 7 999999853 24666665432110
Q ss_pred -----------CC--c-----------hhHHHHHHH-HhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCC
Q 014936 283 -----------GD--P-----------ATFIQAAVP-SILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEG 337 (415)
Q Consensus 283 -----------~~--~-----------~~~~~~a~~-~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~ 337 (415)
.. . ....+.++. ..++ .+++..++.+++++++.+.|+++|++.+...|.+
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~~~~l~-----~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~ 297 (418)
T 2c81_A 223 YCDDSSELMHGDMQLVKKGDIQGSNYCLSEFQSAILLDQLQ-----ELDDKNAIREKNAMFLNDALSKIDGIKVMKRPPQ 297 (418)
T ss_dssp ECSCGGGCCTTCBSEEECCSSCCCBCCCCHHHHHHHHHHHT-----THHHHHHHHHHHHHHHHHHHTTSTTEEECCCCTT
T ss_pred ccccccccccchhhccccccccCcCCCcCHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHhccCCCcccCCCCCC
Confidence 00 0 011122221 2232 3566777788888999999998888873323444
Q ss_pred -ceE---EE-EecCccccCCCCCHHHHHHHHHhhcCeE---EEcCCCCC----------------------------C--
Q 014936 338 -SMA---VM-LKLNLSLLDDIIDDIDFCFKLAKEESVI---ILPGTAVG----------------------------L-- 379 (415)
Q Consensus 338 -g~~---~~-~~l~~~~~~~~~~~~~~~~~ll~~~gi~---v~~g~~~~----------------------------~-- 379 (415)
+.. ++ +.++.....+ .+..++...|.+++||. +.++..+. .
T Consensus 298 ~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~L~~~~gI~~~~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 376 (418)
T 2c81_A 298 VSRQTYYGYVFRFDPVKFGG-LNADQFCEILREKLNMGTFYLHPPYLPVHKNPLFCPWTKNRYLKSVRKTEAYWRGLHYP 376 (418)
T ss_dssp EEECCCSEEEEEECGGGTTT-CCHHHHHHHHHHHHTCCTTTEECCCCCGGGCTTCCGGGCTTSCHHHHCCHHHHHTCCCH
T ss_pred CcccccEEEEEEEccccccc-cCHHHHHHHHHHcCCCCcccccccccccccCchhcccccccccccccccccccccCCCh
Confidence 222 22 5554210001 24667777765444999 88875220 0
Q ss_pred ------CCeEEEEe--eC-ChhhHHHHHHHHHHHHHHH
Q 014936 380 ------KNWLRVTF--AV-DPYSLEECLDRIKSFYQRH 408 (415)
Q Consensus 380 ------~~~iRi~~--~~-~~~~l~~~l~~l~~~~~~~ 408 (415)
.+.||+++ .+ ++++++.+++.|+++++++
T Consensus 377 ~~~~~~~~~lrl~~~~~~gt~edi~~~~~~l~~~~~~~ 414 (418)
T 2c81_A 377 VSERASGQSIVIHHAILLAEPSHLSLLVDAVAELARKF 414 (418)
T ss_dssp HHHHHHHHEEEEEGGGGGSCHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHhCEEEecCCccCCCHHHHHHHHHHHHHHHHhh
Confidence 14799999 47 8999999999999887653
No 157
>1mdo_A ARNB aminotransferase; type 1 aminotransferase fold; HET: MSE PMP; 1.70A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1mdx_A* 1mdz_A*
Probab=99.97 E-value=2.9e-29 Score=237.35 Aligned_cols=323 Identities=12% Similarity=0.075 Sum_probs=232.0
Q ss_pred ceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHH
Q 014936 36 KVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDV 115 (415)
Q Consensus 36 ~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~ 115 (415)
++|+|+. |. + ++.+++++.+.+.... |.+..+..++|+.++++++ .+++++++|+++++..
T Consensus 9 ~~i~~~~--p~----~--~~~~~~a~~~~~~~~~---~~~~~~~~~l~~~la~~~~--------~~~~~~~~~gt~al~~ 69 (393)
T 1mdo_A 9 DFLPFSR--PA----M--GAEELAAVKTVLDSGW---ITTGPKNQELEAAFCRLTG--------NQYAVAVSSATAGMHI 69 (393)
T ss_dssp CCBCSCC--CC----C--CHHHHHHHHHHHHHTC---CSSSHHHHHHHHHHHHHHC--------CSEEEEESCHHHHHHH
T ss_pred cccccCC--CC----C--CHHHHHHHHHHHhcCC---cCCChHHHHHHHHHHHHhC--------CCcEEEecChHHHHHH
Confidence 3567765 32 3 3678899988887542 3344678999999999983 3589999999999999
Q ss_pred HHHHh-cCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHH
Q 014936 116 AMALL-SRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQH 194 (415)
Q Consensus 116 ~~~~l-~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~ 194 (415)
++.++ .++||+|+++.|+|+++...++..|++++.++.++ +++.+|++++++.+++++++|++++ |||... +
T Consensus 70 ~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~-~~~~~d~~~l~~~l~~~~~~v~~~~---~~G~~~---~ 142 (393)
T 1mdo_A 70 ALMALGIGEGDEVITPSMTWVSTLNMIVLLGANPVMVDVDR-DTLMVTPEHIEAAITPQTKAIIPVH---YAGAPA---D 142 (393)
T ss_dssp HHHHTTCCTTCEEEEESSSCHHHHHHHHHTTCEEEEECBCT-TTCCBCHHHHHHHCCTTEEEECCBC---GGGCCC---C
T ss_pred HHHHcCCCCCCEEEeCCCccHhHHHHHHHCCCEEEEEeccC-CcCCCCHHHHHHhcCCCceEEEEeC---CCCCcC---C
Confidence 99999 89999999999999999999999999999998864 3467999999999988888877754 799985 4
Q ss_pred HHHHHHHHhhcCcEEEEccccCCc-ccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHH
Q 014936 195 LQKLAETANKLKTLVIADEVYGHL-VFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVE 273 (415)
Q Consensus 195 l~~i~~~~~~~~~~li~De~~~~~-~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~ 273 (415)
+++|.++|+++|+++|+|++|+.+ .+.+. ++ +. ..+++.|+||...++|.|+||+++++ +++.+
T Consensus 143 ~~~i~~l~~~~~~~li~D~a~~~g~~~~~~---~~---~~--~d~~~~S~~k~K~l~~~~~g~~~~~~-------~~~~~ 207 (393)
T 1mdo_A 143 LDAIYALGERYGIPVIEDAAHATGTSYKGR---HI---GA--RGTAIFSFHAIKNITCAEGGIVVTDN-------PQFAD 207 (393)
T ss_dssp HHHHHHHHHHHTCCBCEECTTCTTCEETTE---ET---TS--SSEEEEECCTTSSSCSSSCEEEEESC-------HHHHH
T ss_pred HHHHHHHHHHcCCeEEEECccccCCeECCe---ec---CC--CCeEEEeCCCCCccccccceEEEeCC-------HHHHH
Confidence 888889999999999999999964 33321 11 11 34888999943345556899999863 25666
Q ss_pred HHHhhcccc-------------------------CCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCC
Q 014936 274 RMKKYFDIL-------------------------GDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPC 328 (415)
Q Consensus 274 ~~~~~~~~~-------------------------~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~ 328 (415)
.+....... ...+++...++...++ .+++..++.+++++++.+.|++++
T Consensus 208 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~a~~~~~l~-----~~~~~~~~~~~~~~~l~~~L~~~~- 281 (393)
T 1mdo_A 208 KLRSLKFHGLGVDAWDRQSGGRAPQAEVLAPGYKYNLPDLNAAIALAQLQ-----KLDALNARRAAIAAQYHQAMADLP- 281 (393)
T ss_dssp HHHHHTBTTEECC-----------CCEESSCCCBCCCCHHHHHHHHHHHH-----THHHHHHHHHHHHHHHHHHHHTSS-
T ss_pred HHHHHHhcCCcccchhhhcccccccccccccCccCCCCHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHhcCC-
Confidence 665432211 1123343333333443 255666777788888999998885
Q ss_pred CcCCCCC-----CCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCC--------------CC-------CCe
Q 014936 329 ISCPHKP-----EGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAV--------------GL-------KNW 382 (415)
Q Consensus 329 ~~~~~~p-----~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~--------------~~-------~~~ 382 (415)
+.....| .+++++|+.++.... + .+..++...+ .++||.+.+|..+ .. ..+
T Consensus 282 ~~~~~~~~~~~~~~~~~~~v~~~~~~~-~-~~~~~l~~~l-~~~gi~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (393)
T 1mdo_A 282 FQPLSLPSWEHIHAWHLFIIRVDEARC-G-ITRDALMASL-KTKGIGTGLHFRAAHTQKYYRERFPTLTLPDTEWNSERI 358 (393)
T ss_dssp CEECCCCSSCEECCCSCEEEECCHHHH-S-SCHHHHHHHH-HHTTBCCBCCCCCGGGSHHHHHHSTTCCCHHHHHHHTTE
T ss_pred cccccCCCCCCCceeEEEEEEeccccc-c-cCHHHHHHHH-HhCCCCcccccCccccChhhhccCCccCChhHHHHHhCE
Confidence 6532123 455678888863100 0 1456666665 5679999988754 11 347
Q ss_pred EEEEee--CChhhHHHHHHHHHHHHHHH
Q 014936 383 LRVTFA--VDPYSLEECLDRIKSFYQRH 408 (415)
Q Consensus 383 iRi~~~--~~~~~l~~~l~~l~~~~~~~ 408 (415)
+|+++. .++++++.+++.|+++++..
T Consensus 359 lRi~~~~~~t~~~i~~~~~~l~~~~~~~ 386 (393)
T 1mdo_A 359 CSLPLFPDMTESDFDRVITALHQIAGQG 386 (393)
T ss_dssp EEECCCTTCCHHHHHHHHHHHHHHHC--
T ss_pred EEecCCCCCCHHHHHHHHHHHHHHHhcC
Confidence 999996 68999999999999887653
No 158
>3dod_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, biotin biosynthesis, pyridoxal phosphate, adenosyl-L-methionine; HET: PLP; 1.90A {Bacillus subtilis} SCOP: c.67.1.0 PDB: 3drd_A 3du4_A*
Probab=99.97 E-value=6.3e-30 Score=245.86 Aligned_cols=348 Identities=14% Similarity=0.068 Sum_probs=221.4
Q ss_pred cCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHH
Q 014936 33 NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQA 112 (415)
Q Consensus 33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~a 112 (415)
+++.++||..|......+. .+|.+.+++.+++.... .|....+..+.++++++++.+..+ ...+++++++|+++|
T Consensus 42 ~g~~ylD~~~~~~~~~lG~-~~p~v~~A~~~~~~~~~--~~~~~~~~~~~~~~la~~l~~~~~--~~~~~v~~~~sGseA 116 (448)
T 3dod_A 42 NGKEYYDGFSSVWLNVHGH-RKKELDDAIKKQLGKIA--HSTLLGMTNVPATQLAETLIDISP--KKLTRVFYSDSGAEA 116 (448)
T ss_dssp TSCEEEETTHHHHTCSSCB-SCHHHHHHHHHHHTTCS--CCCCSSSEEHHHHHHHHHHHHHSC--TTEEEEEEESSHHHH
T ss_pred CCCEEEECCcchhhccCCC-CCHHHHHHHHHHHHhcc--CccccccCCHHHHHHHHHHHHhCC--CCCCEEEEeCchHHH
Confidence 4778999998753222222 47999999999987542 233334455677777777776554 345899999999999
Q ss_pred HHHHHHHhcC----CC----CEEEEcCCCCcchHHHHHhCCC-------------eEEEeeccCCCCCCC----------
Q 014936 113 IDVAMALLSR----PG----ANILLPRPGFPIYELSAAFRHI-------------EVRHFDLLPDKGWEV---------- 161 (415)
Q Consensus 113 l~~~~~~l~~----~g----d~vi~~~p~y~~~~~~~~~~g~-------------~~~~~~~~~~~~~~~---------- 161 (415)
+..+++++.. +| |+|++.+|+|+++...+...+. .+..++. .+.+..
T Consensus 117 ~~~al~~~~~~~~~~G~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~ 194 (448)
T 3dod_A 117 MEIALKMAFQYWKNIGKPEKQKFIAMKNGYHGDTIGAVSVGSIELFHHVYGPLMFESYKAPI--PYVYRSESGDPDECRD 194 (448)
T ss_dssp HHHHHHHHHHHHHHTTCTTCCEEEEEC-----------------------------CEEECC--CCCTTSSSCCHHHHHH
T ss_pred HHHHHHHHHHHHHhhCCCCCCEEEEECCCCCCccHHHHHhcCCccccccccCCCCCceEeCC--CccccCCccchhhhhH
Confidence 9999999865 44 9999999999887654433322 1222222 122222
Q ss_pred -ChhHHHhhcC--CCceEEEecCC-C-Ccccc-CCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCC
Q 014936 162 -DLDDIESLAD--QNTVALVIINP-G-NPCGN-VYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTV 235 (415)
Q Consensus 162 -~~~~l~~~~~--~~~~~v~i~~p-~-nptG~-~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~ 235 (415)
|+++|+++++ +...++++++| + |++|. +++.+.+++|.++|++||+++|+||+|.++.+.|... ....++...
T Consensus 195 ~d~~~le~~l~~~~~~~a~vi~ep~~~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DEv~~g~g~~g~~~-a~~~~~~~~ 273 (448)
T 3dod_A 195 QCLRELAQLLEEHHEEIAALSIESMVQGASGMIVMPEGYLAGVRELCTTYDVLMIVDEVATGFGRTGKMF-ACEHENVQP 273 (448)
T ss_dssp HHHHHHHHHHHHHGGGEEEEEEESSEESTTTCEECCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSS-GGGGGTCCC
T ss_pred HHHHHHHHHHHhCCCCEEEEEEeCcccCCCCeecCCHHHHHHHHHHHHHhCCEEEEeccccCCCcccchh-hhhhcCCCC
Confidence 3788888886 33444555555 5 77774 5788889999999999999999999999876655432 222233222
Q ss_pred CeEEEccCccccCCCC-ceEEEEEeeCCCCCCChHHHHHHHHh-------h-ccccCCchhHHHHHHHHhhCCCc-HHHH
Q 014936 236 PILTLGSLSKRWIVPG-WRLGWFVTTDPCGMFRKPKVVERMKK-------Y-FDILGDPATFIQAAVPSILQQPD-EVFF 305 (415)
Q Consensus 236 ~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~-------~-~~~~~~~~~~~~~a~~~~l~~~~-~~~~ 305 (415)
+ +.+|||+++. | +|+||+++++ ++++.+.. . ...+++.+++++.++.++|+... ++.+
T Consensus 274 d---i~t~sK~l~~-G~~~ig~v~~~~--------~~~~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~ 341 (448)
T 3dod_A 274 D---LMAAGKGITG-GYLPIAVTFATE--------DIYKAFYDDYENLKTFFHGHSYTGNQLGCAVALENLALFESENIV 341 (448)
T ss_dssp S---EEEECGGGGT-TSSCCEEEEEEH--------HHHHTTCSCGGGCCCCCCCCTTTTCHHHHHHHHHHHHHHHHTTHH
T ss_pred C---EEEecccccC-CcCceEEEEECH--------HHHHHhhhccccCCcccccCCCCcCHHHHHHHHHHHHHHhcccHH
Confidence 2 3368999754 8 5999999975 67777765 2 22356778999999988886421 1233
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCccccCCC--C---C-HHHHHHHHHhhcCeEEEcCCCCCC
Q 014936 306 KKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLDDI--I---D-DIDFCFKLAKEESVIILPGTAVGL 379 (415)
Q Consensus 306 ~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~~~~--~---~-~~~~~~~ll~~~gi~v~~g~~~~~ 379 (415)
++.++..+..++.+.+ +..+|.+. . .+..|.++|+.+........ . . ..++...++ ++||.+.|+.
T Consensus 342 ~~~~~~~~~~~~~l~~-l~~~~~~~-~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~~~~~~---- 413 (448)
T 3dod_A 342 EQVAEKSKKLHFLLQD-LHALPHVG-D-IRQLGFMCGAELVRSKETKEPYPADRRIGYKVSLKMR-ELGMLTRPLG---- 413 (448)
T ss_dssp HHHHHHHHHHHHHHHH-HTTSTTEE-E-EEEETTEEEEEECSBTTTTBCCCGGGCHHHHHHHHHH-HTTEECCEET----
T ss_pred HHHHHHHHHHHHHHHH-HhcCCCeE-E-EEeeeEEEEEEEccCcccccccchhhHHHHHHHHHHH-HCCcEEeccC----
Confidence 3444444444444544 44554333 2 33457788887754211000 0 0 245666665 5699998872
Q ss_pred CCeEEEEe--eCChhhHHHHHHHHHHHHHHHH
Q 014936 380 KNWLRVTF--AVDPYSLEECLDRIKSFYQRHA 409 (415)
Q Consensus 380 ~~~iRi~~--~~~~~~l~~~l~~l~~~~~~~~ 409 (415)
+++||++ ..+++++++++++|++++++..
T Consensus 414 -~~iRi~~~~~~t~e~i~~~l~~l~~~l~~~~ 444 (448)
T 3dod_A 414 -DVIAFLPPLASTAEELSEMVAIMKQAIHEVT 444 (448)
T ss_dssp -TEEEECCCTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred -CEEEEECCCCCCHHHHHHHHHHHHHHHHHHh
Confidence 7999966 5789999999999999998754
No 159
>1qz9_A Kynureninase; kynurenine, tryptophan, PLP, vitamin B6, pyridoxal-5'-phosph hydrolase; HET: PLP P3G; 1.85A {Pseudomonas fluorescens} SCOP: c.67.1.3
Probab=99.97 E-value=1e-29 Score=242.34 Aligned_cols=319 Identities=13% Similarity=0.075 Sum_probs=224.5
Q ss_pred cceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCC--------CCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEe
Q 014936 35 KKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYA--------PTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVT 106 (415)
Q Consensus 35 ~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~--------~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~ 106 (415)
++.+.|+.+.+. +.++.+.+++.+.+... +..+. ......++++.+++++ ++++++|++|
T Consensus 27 ~~~~yld~~~~~-----~~~~~v~~a~~~~l~~~-~~~~~~~~~~~~~~~~~~~~l~~~la~~~------g~~~~~v~~~ 94 (416)
T 1qz9_A 27 EGVIYLDGNSLG-----ARPVAALARAQAVIAEE-WGNGLIRSWNSAGWRDLSERLGNRLATLI------GARDGEVVVT 94 (416)
T ss_dssp TTCEECCTTTSC-----CCBTTHHHHHHHHHHTC-CCCCGGGHHHHTSGGGHHHHHHHHHHTTT------TCCTTSEEEC
T ss_pred CCeEeecCCCcC-----CCcHHHHHHHHHHHHHH-HhccCccccchhhHHHHHHHHHHHHHHHc------CCCcccEEEe
Confidence 456788877632 45778999999988642 11111 0133456777777766 3567899999
Q ss_pred CChHHHHHHHHHHhc------CCCCE-EEEcCCCCcchHHH----HHhC--CCeEEEeeccCCCCCCCChhHHHhhcCCC
Q 014936 107 SGCTQAIDVAMALLS------RPGAN-ILLPRPGFPIYELS----AAFR--HIEVRHFDLLPDKGWEVDLDDIESLADQN 173 (415)
Q Consensus 107 ~g~~~al~~~~~~l~------~~gd~-vi~~~p~y~~~~~~----~~~~--g~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 173 (415)
+|+++++..++.++. ++||+ |+++.++|+.+... ++.. |++++.++. +++|+++++++
T Consensus 95 ~g~t~al~~al~~~~~~~~~~~~gd~vii~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~---------~~~l~~~i~~~ 165 (416)
T 1qz9_A 95 DTTSINLFKVLSAALRVQATRSPERRVIVTETSNFPTDLYIAEGLADMLQQGYTLRLVDS---------PEELPQAIDQD 165 (416)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHSTTCCEEEEETTSCHHHHHHHHHHHHHHCSSCEEEEESS---------GGGHHHHCSTT
T ss_pred CChhHHHHHHHHhhcccccccCCCCcEEEEcCCCCCchHHHHHHHHHHhcCCceEEEeCc---------HHHHHHHhCCC
Confidence 999999998888876 88987 55556677765443 2333 888888764 78889888888
Q ss_pred ceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCce
Q 014936 174 TVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWR 253 (415)
Q Consensus 174 ~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r 253 (415)
++++++++|+||||.+++ +++|.++|+++|+++|+|++|+... ....+..++. .+++.|+||++ .+|.+
T Consensus 166 ~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~D~a~~~g~----~~~~~~~~~~---d~~~~s~~K~l-~~g~~ 234 (416)
T 1qz9_A 166 TAVVMLTHVNYKTGYMHD---MQALTALSHECGALAIWDLAHSAGA----VPVDLHQAGA---DYAIGCTYKYL-NGGPG 234 (416)
T ss_dssp EEEEEEESBCTTTCBBCC---HHHHHHHHHHHTCEEEEECTTTTTT----SCCCHHHHTC---SEEEECSSSTT-CCCTT
T ss_pred ceEEEEeccccCcccccC---HHHHHHHHHHcCCEEEEEccccccC----cCCChhhcCC---CEEEecCcccC-CCCCC
Confidence 999999999999999987 7888889999999999999998522 2222223332 37888999984 56777
Q ss_pred E-EEEEeeCCCCCCChHHHHHHHHhh------------------------ccccCCchhHHHHHHHHhhCCCcHHHHHHH
Q 014936 254 L-GWFVTTDPCGMFRKPKVVERMKKY------------------------FDILGDPATFIQAAVPSILQQPDEVFFKKT 308 (415)
Q Consensus 254 ~-G~~~~~~~~~~~~~~~~~~~~~~~------------------------~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~ 308 (415)
+ |+++++++ +++.+... ....++.+...+.++.++++.....++++.
T Consensus 235 ~~g~l~~~~~--------~~~~l~~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~ 306 (416)
T 1qz9_A 235 SQAFVWVSPQ--------LCDLVPQPLSGWFGHSRQFAMEPRYEPSNGIARYLCGTQPITSLAMVECGLDVFAQTDMASL 306 (416)
T ss_dssp CCCEEEECTT--------TTTTSCCSCCCGGGBCTTSCCCSSCCBCSSGGGGCCSCCCHHHHHHHHHHHHHHTTSCHHHH
T ss_pred CeEEEEECHH--------HHhccCCCccccCccccccCCCCccCCCcchHHhcCCCCCHHHHHHHHHHHHHHHhcCHHHH
Confidence 7 99998763 22222211 111235566666666666543222357788
Q ss_pred HHHHHHHHHHHHHHhhcC-C--CCcCCCCCC----CceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCC
Q 014936 309 LNLLKQSVDICYNKIKEI-P--CISCPHKPE----GSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKN 381 (415)
Q Consensus 309 ~~~~~~~~~~l~~~l~~~-~--~~~~~~~p~----~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~ 381 (415)
.++++++++++.+.|+++ | ++.++ .|. .+.++|+.++ +..++...+ .++||.+... ..+
T Consensus 307 ~~~~~~~~~~l~~~L~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~--------~~~~l~~~l-~~~gi~~~~~----~~~ 372 (416)
T 1qz9_A 307 RRKSLALTDLFIELVEQRCAAHELTLV-TPREHAKRGSHVSFEHP--------EGYAVIQAL-IDRGVIGDYR----EPR 372 (416)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTSCCEEC-SCSSGGGBCSEEEEECT--------THHHHHHHH-HTTTEECEEE----TTT
T ss_pred HHHHHHHHHHHHHHHHhhccCCCeEEe-CCCCHHHcCCEEEEecC--------CHHHHHHHH-HhCCcEeccC----CCC
Confidence 899999999999999875 6 77733 443 3567888775 255666666 4669987532 358
Q ss_pred eEEEEee---CChhhHHHHHHHHHHHHHH
Q 014936 382 WLRVTFA---VDPYSLEECLDRIKSFYQR 407 (415)
Q Consensus 382 ~iRi~~~---~~~~~l~~~l~~l~~~~~~ 407 (415)
++||+++ ++++++++++++|++++++
T Consensus 373 ~lRis~~~~~~t~~~i~~~~~~l~~~~~~ 401 (416)
T 1qz9_A 373 IMRFGFTPLYTTFTEVWDAVQILGEILDR 401 (416)
T ss_dssp EEEEECCTTTCCHHHHHHHHHHHHHHHHH
T ss_pred eEEEeCcccCCCHHHHHHHHHHHHHHHhc
Confidence 9999996 4899999999999998875
No 160
>3tfu_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; transferase, transferase-transferase inhibitor complex; HET: PL8; 1.94A {Mycobacterium tuberculosis} PDB: 3tft_A* 3bv0_A* 3lv2_A*
Probab=99.97 E-value=1.7e-30 Score=249.69 Aligned_cols=339 Identities=12% Similarity=0.043 Sum_probs=232.2
Q ss_pred cCc--ceeEecccCCCCCCCCC-CcHHHHHHHHHHHhcCCC---CCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEe
Q 014936 33 NEK--KVISLAMGDPTVHSCFH-TTHVATEAVAEALLSEKF---NGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVT 106 (415)
Q Consensus 33 ~~~--~~i~l~~g~~~~~~~~~-~~~~~~~a~~~~~~~~~~---~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~ 106 (415)
+|+ .++||..|..... ++ .+|.+.+++.+++..... ..|+ .....+|++.+++++ +...++++++
T Consensus 71 dG~~~~ylD~~s~~~~~~--lGh~~p~v~~A~~~~~~~~~~~~~~~~~-~~~~~~L~e~la~~~------~~~~~~v~~~ 141 (457)
T 3tfu_A 71 DGQPIEVLDAMSSWWTAI--HGHGHPALDQALTTQLRVMNHVMFGGLT-HEPAARLAKLLVDIT------PAGLDTVFFS 141 (457)
T ss_dssp TTEEEEEEETTHHHHTCT--TCBTCHHHHHHHHHHHHHCSCCCSSSEE-CHHHHHHHHHHHHHS------STTEEEEEEE
T ss_pred CCCeeEEEECCCcHhhhc--cCCCCHHHHHHHHHHHHhccCccccccC-CHHHHHHHHHHHHhC------CCCcCEEEEe
Confidence 577 8999988742111 22 589999999998875322 1222 233456666666665 3456799999
Q ss_pred CChHHHHHHHHHHhcC-------CC-CEEEEcCCCCcchHHHHHhCCC--------------eEEEeeccCCCCCCCChh
Q 014936 107 SGCTQAIDVAMALLSR-------PG-ANILLPRPGFPIYELSAAFRHI--------------EVRHFDLLPDKGWEVDLD 164 (415)
Q Consensus 107 ~g~~~al~~~~~~l~~-------~g-d~vi~~~p~y~~~~~~~~~~g~--------------~~~~~~~~~~~~~~~~~~ 164 (415)
+|++++++.+++.+.. +| +.|++.+++|+++...+...+. .+..++.........|++
T Consensus 142 ~sGseA~~~Alk~a~~~~~~~g~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~d~~ 221 (457)
T 3tfu_A 142 DSGSVSVEVAAKMALQYWRGRGLPGKRRLMTWRGGYHGDTFLAMSICDPHGGMHSLWTDVLAAQVFAPQVPRDYDPAYSA 221 (457)
T ss_dssp SSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHTTSCCC----------CCCCEEECCCCSSCCHHHHH
T ss_pred CcHHHHHHHHHHHHHHHHHhcCCCCCceEEEEcCCcCCccHHhhcccCCcccccccccCCCCCceEecCCCcccCHHHHH
Confidence 9999999999998864 55 4899999999987665554421 223333322111123788
Q ss_pred HHHhhcC---CCceEEEecC-CCCccccCC-CHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEE
Q 014936 165 DIESLAD---QNTVALVIIN-PGNPCGNVY-SYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILT 239 (415)
Q Consensus 165 ~l~~~~~---~~~~~v~i~~-p~nptG~~~-~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~ 239 (415)
+|+++++ ++++++++.. ++|++|.++ +.+.+++|.++|++||+++|+||+|.++...|... .+..++...+++
T Consensus 222 ~le~~l~~~~~~~aavi~ep~~~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~g~gr~G~~~-a~~~~~~~pdii- 299 (457)
T 3tfu_A 222 AFEAQLAQHAGELAAVVVEPVVQGAGGMRFHDPRYLHDLRDICRRYEVLLIFDEIATGFGRTGALF-AADHAGVSPDIM- 299 (457)
T ss_dssp HHHHHHHHHGGGEEEEEECSSEECTTTCEECCTHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSS-THHHHTCCCSEE-
T ss_pred HHHHHHHhCCCCEEEEEEeCCCcCCCCcccCCHHHHHHHHHHHHHcCCEEEEEcCccCCccccchh-HhHhcCCCceEE-
Confidence 8998886 4556666666 689999875 78889999999999999999999999876655422 222233333333
Q ss_pred EccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhh------ccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHH
Q 014936 240 LGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKY------FDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLK 313 (415)
Q Consensus 240 ~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~ 313 (415)
||||.++.+.+|+||+++++ ++++.+... ...+++.+++++.++.++|+...+ +...++++
T Consensus 300 --t~sK~l~gG~~~lG~v~~~~--------~i~~~~~~~~~~~~~~~~t~~~n~~a~aaa~aaL~~~~~---~~~~~~~~ 366 (457)
T 3tfu_A 300 --CVGKALTGGYLSLAATLCTA--------DVAHTISAGAAGALMHGPTFMANPLACAVSVASVELLLG---QDWRTRIT 366 (457)
T ss_dssp --EECGGGGTTSSCCEEEEEEH--------HHHHHHHHSSSCSCCCCCTTTTCHHHHHHHHHHHHHHHT---SCHHHHHH
T ss_pred --EEChhhhCCCcceEEEEEcH--------HHHHHhhccCCCceeEecCCCcCHHHHHHHHHHHHHHhh---hHHHHHHH
Confidence 88998644337999999976 688877521 123467789999988888863111 24456666
Q ss_pred HHHHHHHHHhhcC---CCCcCCCCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEe--e
Q 014936 314 QSVDICYNKIKEI---PCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTF--A 388 (415)
Q Consensus 314 ~~~~~l~~~l~~~---~~~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~--~ 388 (415)
++.+++.+.|+++ +++. . .+..|+++++.++.. .+..++...++ ++||.+.|.. +++||++ .
T Consensus 367 ~~~~~l~~~L~~l~~~~~v~-~-vr~~G~~~~i~l~~~-----~~~~~~~~~l~-~~Gv~v~~~~-----~~lRi~p~~~ 433 (457)
T 3tfu_A 367 ELAAGLTAGLDTARALPAVT-D-VRVCGAIGVIECDRP-----VDLAVATPAAL-DRGVWLRPFR-----NLVYAMPPYI 433 (457)
T ss_dssp HHHHHHHHHHGGGGGSTTEE-E-EEECSSCEEEEESSC-----CCHHHHHHHHH-HTTEECCCBT-----TEEEECCCTT
T ss_pred HHHHHHHHHHHHHhcCCCee-e-eecCCeEEEEEECCc-----ccHHHHHHHHH-HCCeEEEecC-----CEEEEECCCC
Confidence 7777777777654 3443 2 244577888888642 13566777665 5599998743 7899987 4
Q ss_pred CChhhHHHHHHHHHHHHHHH
Q 014936 389 VDPYSLEECLDRIKSFYQRH 408 (415)
Q Consensus 389 ~~~~~l~~~l~~l~~~~~~~ 408 (415)
.+++++++++++|++++++.
T Consensus 434 ~t~eei~~~l~~L~~~l~~~ 453 (457)
T 3tfu_A 434 CTPAEITQITSAMVEVARLV 453 (457)
T ss_dssp CCHHHHHHHHHHHHHHHHHC
T ss_pred CCHHHHHHHHHHHHHHHHHh
Confidence 68999999999999998764
No 161
>3k28_A Glutamate-1-semialdehyde 2,1-aminomutase 2; biosynthesis of cofactors, prosthetic groups, and carriers, csgid, cytoplasm, isomerase; HET: MSE PLP; 1.95A {Bacillus anthracis str} SCOP: c.67.1.4 PDB: 3bs8_A*
Probab=99.97 E-value=3e-30 Score=246.88 Aligned_cols=342 Identities=15% Similarity=0.070 Sum_probs=228.7
Q ss_pred ccCcceeEecccCCCCCCCCC-CcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChH
Q 014936 32 KNEKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCT 110 (415)
Q Consensus 32 ~~~~~~i~l~~g~~~~~~~~~-~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~ 110 (415)
.+++.++||..|..... ++ .+|.+++++.+++.......|++ ....+|++.+++++ + .++++++++|++
T Consensus 50 ~~g~~ylD~~~~~~~~~--lG~~~p~v~~A~~~~~~~~~~~~~~~-~~~~~l~~~la~~~------~-~~~~v~~~~~Gs 119 (429)
T 3k28_A 50 IDGNEYIDYVLSWGPLI--HGHANDRVVEALKAVAERGTSFGAPT-EIENKLAKLVIERV------P-SIEIVRMVNSGT 119 (429)
T ss_dssp TTCCEEEESCGGGTTCT--TCBSCHHHHHHHHHHHHHCSCCSSCC-HHHHHHHHHHHHHS------T-TCSEEEEESSHH
T ss_pred CCCCEEEECCCChhhcc--cCCCCHHHHHHHHHHHhhCcCcCCCC-HHHHHHHHHHHHhC------C-CCCEEEEeCChH
Confidence 35788999998864322 33 58999999999887654434544 45678888888876 2 578999999999
Q ss_pred HHHHHHHHHhcC--CCCEEEEcCCCCcchHHHHHh-CCCeEEEeeccCCCCCC------------CChhHHHhhcCC--C
Q 014936 111 QAIDVAMALLSR--PGANILLPRPGFPIYELSAAF-RHIEVRHFDLLPDKGWE------------VDLDDIESLADQ--N 173 (415)
Q Consensus 111 ~al~~~~~~l~~--~gd~vi~~~p~y~~~~~~~~~-~g~~~~~~~~~~~~~~~------------~~~~~l~~~~~~--~ 173 (415)
++++.+++.+.. +++.|++.+|+|+++...+.. .|..+..+......+.. -|+++|+++++. .
T Consensus 120 ea~~~ai~~a~~~~~~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~ 199 (429)
T 3k28_A 120 EATMSALRLARGYTGRNKILKFIGCYHGHGDSLLIKAGSGVATLGLPDSPGVPEGVAKNTITVAYNDLESVKYAFEQFGD 199 (429)
T ss_dssp HHHHHHHHHHHHHHTCCEEEEEETCCCCSCGGGCSSCCTTC-----CCCTTCCHHHHTTEEEEETTCHHHHHHHHHHHGG
T ss_pred HHHHHHHHHHHHhhCCCEEEEECCCcCCCcHHHHHhcCCcccccCCCCcCCCCCcccCceeecCCCCHHHHHHHHHhCCC
Confidence 999999988763 568999999999876544332 22222111111001100 178899888763 3
Q ss_pred ceEEEecCCC-CccccC-CCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCC
Q 014936 174 TVALVIINPG-NPCGNV-YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPG 251 (415)
Q Consensus 174 ~~~v~i~~p~-nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G 251 (415)
..++++++|. |++|.+ .+.+.+++|.++|++||+++|+||+|.++ ..+... ....++...+ +.|+||.++ +|
T Consensus 200 ~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~g~-~~g~~~-~~~~~~~~~d---i~t~sK~~~-~G 273 (429)
T 3k28_A 200 DIACVIVEPVAGNMGVVPPQPGFLEGLREVTEQNGALLIFDEVMTGF-RVAYNC-GQGYYGVTPD---LTCLGKVIG-GG 273 (429)
T ss_dssp GEEEEEECSSBCTTSCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTT-TSSTTH-HHHHHTCCCS---EEEECGGGG-TT
T ss_pred CEEEEEEcCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEecccccc-ccCcch-HHHHhCCCCc---eehhhhhhc-CC
Confidence 4455666664 455655 46888999999999999999999999887 444321 1222222222 347899986 49
Q ss_pred ceEEEEEeeCCCCCCChHHHHHHHHhh----ccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhc--
Q 014936 252 WRLGWFVTTDPCGMFRKPKVVERMKKY----FDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKE-- 325 (415)
Q Consensus 252 ~r~G~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~-- 325 (415)
+|+||+++++ ++++.+... ...+++.+++++.++.++|+... ++..++++++++++.+.|++
T Consensus 274 ~~iG~~~~~~--------~~~~~~~~~~~~~~~~t~~~~~~a~aaa~aal~~~~----~~~~~~~~~~~~~l~~~L~~~~ 341 (429)
T 3k28_A 274 LPVGAYGGKA--------EIMRQVAPSGPIYQAGTLSGNPLAMAAGYETLVQLT----PESYVEFERKAEMLEAGLRKAA 341 (429)
T ss_dssp SCCEEEEECH--------HHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHHTCC----HHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCeEEEEEcH--------HHHhhhccCCCccccCCCCCChHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999865 576666442 22346788999999999998653 45566666666666666654
Q ss_pred --CCCCcCCCCCCCceEEEEecCcccc--------CCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEeeCChhhHH
Q 014936 326 --IPCISCPHKPEGSMAVMLKLNLSLL--------DDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFAVDPYSLE 395 (415)
Q Consensus 326 --~~~~~~~~~p~~g~~~~~~l~~~~~--------~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~~~l~ 395 (415)
.+.+. . .+..|.++++.+..... ++.....++...+ .++||.+.|+. .+.+|+++..++++++
T Consensus 342 ~~~~~~~-~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~Gv~v~~~~----~~~~r~~~~~t~e~i~ 414 (429)
T 3k28_A 342 EKHGIPH-H-INRAGSMIGIFFTDEPVINYDAAKSSNLQFFAAYYREM-VEQGVFLPPSQ----FEGLFLSTVHSDADIE 414 (429)
T ss_dssp HHTTCCC-E-EEEETTEEEEESSSSCCCSHHHHTTSCHHHHHHHHHHH-HHTTEECCSST----TSCBCCCTTCCHHHHH
T ss_pred hhCCCCE-E-EEeeccEEEEEEecCCcccccccccccHHHHHHHHHHH-HHCCeEEecCC----CCCEEEECCCCHHHHH
Confidence 33333 2 34556677776643110 0000124555555 46799999874 3678998888999999
Q ss_pred HHHHHHHHHHHHH
Q 014936 396 ECLDRIKSFYQRH 408 (415)
Q Consensus 396 ~~l~~l~~~~~~~ 408 (415)
+++++|+++++++
T Consensus 415 ~~l~~l~~~l~~~ 427 (429)
T 3k28_A 415 ATIAAAEIAMSKL 427 (429)
T ss_dssp HHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHH
Confidence 9999999988653
No 162
>3a8u_X Omega-amino acid--pyruvate aminotransferase; large pleated sheet, transaminase, pyridox phosphate; HET: PLP; 1.40A {Pseudomonas putida}
Probab=99.97 E-value=1.6e-29 Score=243.29 Aligned_cols=345 Identities=15% Similarity=0.135 Sum_probs=231.4
Q ss_pred cCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCC-CCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHH
Q 014936 33 NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPT-AGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQ 111 (415)
Q Consensus 33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~-~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~ 111 (415)
.++.++|+..+.+....++. +|.+++++.+.+.... +... .+..++++.+++.+.+..+ .++++|++++|+++
T Consensus 48 ~g~~~lD~~~~~~~~~lG~~-~~~v~~a~~~~~~~~~---~~~~~~~~~~~~~~l~~~la~~~~--~~~~~v~~~~ggse 121 (449)
T 3a8u_X 48 KGRKVYDSLSGLWTCGAGHT-RKEIQEAVAKQLSTLD---YSPGFQYGHPLSFQLAEKITDLTP--GNLNHVFFTDSGSE 121 (449)
T ss_dssp TCCEEEETTHHHHTCTTCBS-CHHHHHHHHHHTTTCS---CCCSSSCCCHHHHHHHHHHHTTSS--TTEEEEEEESSHHH
T ss_pred CCCEEEECCccHhhccCCCC-CHHHHHHHHHHHHhCC---CccccccCCHHHHHHHHHHHHhCC--CCCCEEEEcCcHHH
Confidence 46678899777532222223 7999999999886532 1111 2333455566666655433 46789999999999
Q ss_pred HHHHHHHHhcC--------CCCEEEEcCCCCcchHH-HHHhCCC------------eEEEeeccC--CCC-CCCC-----
Q 014936 112 AIDVAMALLSR--------PGANILLPRPGFPIYEL-SAAFRHI------------EVRHFDLLP--DKG-WEVD----- 162 (415)
Q Consensus 112 al~~~~~~l~~--------~gd~vi~~~p~y~~~~~-~~~~~g~------------~~~~~~~~~--~~~-~~~~----- 162 (415)
+++.+++++.. +||+|++.+|+|++... .....|. .+..++.+. ..+ .++|
T Consensus 122 a~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~d~~~~~ 201 (449)
T 3a8u_X 122 CALTAVKMVRAYWRLKGQATKTKMIGRARGYHGVNIAGTSLGGVNGNRKLFGQPMQDVDHLPHTLLASNAYSRGMPKEGG 201 (449)
T ss_dssp HHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHCCCHHHHTTTCCCSCSEEEECCCCCGGGTTCSSSCSSSH
T ss_pred HHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCCChhhhhccCChhhccccCCCCCCCeEecCCccccCccccCChHHHH
Confidence 99999998763 67999999999997654 3443331 234444321 111 1245
Q ss_pred ---hhHHHhhcCC---CceEEEecCCC-Ccccc-CCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCC
Q 014936 163 ---LDDIESLADQ---NTVALVIINPG-NPCGN-VYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGST 234 (415)
Q Consensus 163 ---~~~l~~~~~~---~~~~v~i~~p~-nptG~-~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~ 234 (415)
+++|+++++. ...++++++|+ |+||. ..+.+.+++|.++|++||+++|+||+|.++...+.. ..+..++..
T Consensus 202 ~~~~~~le~~l~~~~~~~~~~vi~~p~~~~tG~~~~~~~~l~~l~~l~~~~~~~li~Dev~~~~g~~g~~-~~~~~~~~~ 280 (449)
T 3a8u_X 202 IALADELLKLIELHDASNIAAVFVEPLAGSAGVLVPPEGYLKRNREICNQHNILLVFDEVITGFGRTGSM-FGADSFGVT 280 (449)
T ss_dssp HHHHHHHHHHHHHHCGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSS-SHHHHHTCC
T ss_pred HHHHHHHHHHHHhcCCCCEEEEEEcCccCCCCCccCCHHHHHHHHHHHHHhCCEEEEeccccCccccCcc-hhhhhcCCC
Confidence 8999988862 23355667774 67997 567999999999999999999999999876544432 122222222
Q ss_pred CCeEEEccCccccCCCC-ceEEEEEeeCCCCCCChHHHHHHHHhh----------ccccCCchhHHHHHHHHhhCCCcHH
Q 014936 235 VPILTLGSLSKRWIVPG-WRLGWFVTTDPCGMFRKPKVVERMKKY----------FDILGDPATFIQAAVPSILQQPDEV 303 (415)
Q Consensus 235 ~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~a~~~~l~~~~~~ 303 (415)
.+++ |+||.++. | +|+||+++++ ++++.+... ...+.+.+++++.++.++|+...+
T Consensus 281 ~di~---s~sK~l~~-G~~~~G~~~~~~--------~~~~~l~~~~~~~~~~~~~~~~t~~~~~~~~aa~~aal~~~~~- 347 (449)
T 3a8u_X 281 PDLM---CIAKQVTN-GAIPMGAVIAST--------EIYQTFMNQPTPEYAVEFPHGYTYSAHPVACAAGLAALCLLQK- 347 (449)
T ss_dssp CSEE---EECGGGGT-TSSCCEEEEEEH--------HHHHHHHTCSSCTTSCSSCCCCTTTTCHHHHHHHHHHHHHHHH-
T ss_pred CCEE---EEcccccC-CCCceEEEEECH--------HHHHHhhccCcccccccccccCCCcccHHHHHHHHHHHHHHHh-
Confidence 2233 88999864 7 9999999865 677777653 122456788888888888863211
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCCcCC-CCCCCceEEEEecCccccCCCC--CHHHHHHHHHhhcCeEEEcCCCCCCC
Q 014936 304 FFKKTLNLLKQSVDICYNKIKEIPCISCP-HKPEGSMAVMLKLNLSLLDDII--DDIDFCFKLAKEESVIILPGTAVGLK 380 (415)
Q Consensus 304 ~~~~~~~~~~~~~~~l~~~l~~~~~~~~~-~~p~~g~~~~~~l~~~~~~~~~--~~~~~~~~ll~~~gi~v~~g~~~~~~ 380 (415)
+...++++++++++.+.|++++.+..+ ..+..|+++|+.++.... .. +..++...++ ++||.+.|+.
T Consensus 348 --~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~~~~g~~~~i~~~~~~~--~~~~~~~~~~~~l~-~~Gv~v~~~g----- 417 (449)
T 3a8u_X 348 --ENLVQSVAEVAPHFEKALHGIKGAKNVIDIRNFGLAGAIQIAPRDG--DAIVRPFEAGMALW-KAGFYVRFGG----- 417 (449)
T ss_dssp --TTHHHHHHHHHHHHHHHHHTTTTSTTEEEEEEETTEEEEEECCBTT--BSSHHHHHHHHHHH-HHTEECEEET-----
T ss_pred --cCHHHHHHHHHHHHHHHHHHHhcCCCeEEEeeeEEEEEEEEecCcc--cccccHHHHHHHHH-HCCcEEecCC-----
Confidence 246677888888888888775333311 124567889998864210 00 1225666665 5699999872
Q ss_pred CeEEEEe--eCChhhHHHHHHHHHHHHHH
Q 014936 381 NWLRVTF--AVDPYSLEECLDRIKSFYQR 407 (415)
Q Consensus 381 ~~iRi~~--~~~~~~l~~~l~~l~~~~~~ 407 (415)
+++||++ ..+++++++++++|++++++
T Consensus 418 ~~iRis~~~~~t~~~i~~~l~~l~~~l~~ 446 (449)
T 3a8u_X 418 DTLQFGPTFNSKPQDLDRLFDAVGEVLNK 446 (449)
T ss_dssp TEEEECCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred CEEEEECCCcCCHHHHHHHHHHHHHHHHH
Confidence 7899996 57899999999999998765
No 163
>3uwc_A Nucleotide-sugar aminotransferase; lipopolysaccharide biosynthesis; HET: MSE PMP; 1.80A {Coxiella burnetii}
Probab=99.97 E-value=2.4e-29 Score=236.35 Aligned_cols=323 Identities=15% Similarity=0.156 Sum_probs=229.8
Q ss_pred CcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHH
Q 014936 34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAI 113 (415)
Q Consensus 34 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al 113 (415)
+.++++++.+.|. ..+ +++++.+.+... .|.+..+..++|+.++++++ .+++++++||++++
T Consensus 5 ~~~~~~l~~~~~~------~~~-~~~~~~~~~~~~---~~~~~~~~~~l~~~la~~~~--------~~~~~~~~~gt~a~ 66 (374)
T 3uwc_A 5 RVPYSYLERQFAD------IEP-YLNDLREFIKTA---DFTLGAELEKFEKRFAALHN--------APHAIGVGTGTDAL 66 (374)
T ss_dssp CBCSCCHHHHTSS------CHH-HHHHHHHHHHHT---CCSSCHHHHHHHHHHHHHTT--------CSEEEEESCHHHHH
T ss_pred cceeeccccCCCC------chH-HHHHHHHHHHcC---CcccChhHHHHHHHHHHHhC--------CCcEEEeCCHHHHH
Confidence 4567899999754 234 888888877653 45566788999999999983 34889999999999
Q ss_pred HHHHHHh-cCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCH
Q 014936 114 DVAMALL-SRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSY 192 (415)
Q Consensus 114 ~~~~~~l-~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~ 192 (415)
..++.++ .++||+|+++.|+|+++...++..|.++..++++ .++.+|++++++.+++++++++ |+||||...+
T Consensus 67 ~~~~~~~~~~~gd~v~~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~d~~~l~~~~~~~~~~v~---~~n~~G~~~~- 140 (374)
T 3uwc_A 67 AMSFKMLNIGAGDEVITCANTFIASVGAIVQAGATPVLVDSE--NGYVIDPEKIEAAITDKTKAIM---PVHYTGNIAD- 140 (374)
T ss_dssp HHHHHHTTCCTTCEEEEESSSCHHHHHHHHHTTCEEEEECBC--TTSSBCGGGTGGGCCTTEEEEC---CBCGGGCCCC-
T ss_pred HHHHHHcCCCCCCEEEECCCccHHHHHHHHHcCCEEEEEecC--CCCCcCHHHHHHhCCCCceEEE---EeCCcCCcCC-
Confidence 9999999 8999999999999999999999999999999886 4567899999999988777666 8999999854
Q ss_pred HHHHHHHHHHhhcCcEEEEccccCCcc-cCCCCcccccccCCCCCeEEEccCc--cccCCCCceEEEEEeeCCCCCCChH
Q 014936 193 QHLQKLAETANKLKTLVIADEVYGHLV-FGDKPFVPMGVFGSTVPILTLGSLS--KRWIVPGWRLGWFVTTDPCGMFRKP 269 (415)
Q Consensus 193 ~~l~~i~~~~~~~~~~li~De~~~~~~-~~~~~~~~~~~~~~~~~~i~~~s~s--K~~~~~G~r~G~~~~~~~~~~~~~~ 269 (415)
+++|.++|+++|+++|+|++|+.+. +.+. ....+. .+++.|+| |.++.+|. .|++++++ +
T Consensus 141 --~~~i~~~~~~~~~~li~D~~~~~g~~~~~~---~~~~~~----d~~~~s~~~~K~l~~~g~-~g~~~~~~-------~ 203 (374)
T 3uwc_A 141 --MPALAKIAKKHNLHIVEDACQTILGRINDK---FVGSWG----QFACFSLHPLKNLNVWSD-AGVIITHS-------D 203 (374)
T ss_dssp --HHHHHHHHHHTTCEEEEECTTCTTCEETTE---ETTSSS----SEEEEECSSSSSSCCSSC-CEEEEESC-------H
T ss_pred --HHHHHHHHHHcCCEEEEeCCCccCceeCCe---eccccc----cEEEEeCCCCCcCCccce-eEEEEeCC-------H
Confidence 7888889999999999999998754 2221 111111 26777866 99765455 78888765 2
Q ss_pred HHHHHHHhhccc-------------cCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCC-CcCCCCC
Q 014936 270 KVVERMKKYFDI-------------LGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPC-ISCPHKP 335 (415)
Q Consensus 270 ~~~~~~~~~~~~-------------~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~-~~~~~~p 335 (415)
++.+.++..... +...+.....+....+ +.+++..++.+++.+.+.+.|+++++ +.....+
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~~~~-----~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~ 278 (374)
T 3uwc_A 204 EYAEKLRLYRNHGLINRDVCVEYGINCRMDTIQAVIANRLM-----NQLETITEKRRGIAHLYDQSFVDLSEFIDVPVRR 278 (374)
T ss_dssp HHHHHHHHHTBTTEEETTEESSCCCBCBCCHHHHHHHHHHG-----GGHHHHHHHHHHHHHHHHHHTGGGTTTEECCCCC
T ss_pred HHHHHHHHHHhcCccccCccccccccCCCCHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHhccCCCeEEeccCC
Confidence 465655544210 1112333333332233 23567778888888999999998866 6633233
Q ss_pred CCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCC----------------C-------CCeEEEEee--CC
Q 014936 336 EGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVG----------------L-------KNWLRVTFA--VD 390 (415)
Q Consensus 336 ~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~----------------~-------~~~iRi~~~--~~ 390 (415)
.++...|..+.... .+..++...+ .++||.+.++.... . .+.+|+++. ++
T Consensus 279 ~~~~~~~~~~~~~~----~~~~~l~~~L-~~~gi~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lrl~~~~~~t 353 (374)
T 3uwc_A 279 EGVYHVFHIYVLRV----KYRDQLFQYL-KDNGIEVKIHYPIAMHLQPAAKSLGYQQGDFPMAEKHGEAVITLPAHPYLT 353 (374)
T ss_dssp TTEECCCSSEEEEE----TTHHHHHHHH-HHTTBCCBCSCSSCGGGSGGGGGGCCCTTSCHHHHHHHHHEEEECCCTTSC
T ss_pred CCCceeeEEEEEEc----CCHHHHHHHH-HHCCCccccCCCCccccChhhhhcCCccCCCccHHHHHhCEEEccCCCCCC
Confidence 33322221111100 1355665555 56799998875110 0 167999984 68
Q ss_pred hhhHHHHHHHHHHHHHH
Q 014936 391 PYSLEECLDRIKSFYQR 407 (415)
Q Consensus 391 ~~~l~~~l~~l~~~~~~ 407 (415)
+++++.+++.|++++++
T Consensus 354 ~edi~~~~~~l~~~l~~ 370 (374)
T 3uwc_A 354 EEEINYIIKKVREFYLE 370 (374)
T ss_dssp HHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHh
Confidence 99999999999998764
No 164
>3i5t_A Aminotransferase; pyridoxal 5'-phosphate, PSI-2, NYSGXRC, ST genomics, protein structure initiative; HET: PLP; 2.00A {Rhodobacter sphaeroides 2}
Probab=99.97 E-value=2.5e-29 Score=242.86 Aligned_cols=351 Identities=13% Similarity=0.102 Sum_probs=237.3
Q ss_pred ccCcceeEecccCCCCCCCCC-CcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChH
Q 014936 32 KNEKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCT 110 (415)
Q Consensus 32 ~~~~~~i~l~~g~~~~~~~~~-~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~ 110 (415)
.+++.++||..|..... ++ .+|.+++|+.+++..... .+. ..+..+.++++++++.+..+ ...+++++++|++
T Consensus 51 ~~G~~ylD~~s~~~~~~--lGh~~p~v~~A~~~~l~~~~~-~~~-~~~~~~~~~~la~~l~~~~~--~~~~~v~~~~sGs 124 (476)
T 3i5t_A 51 EDGRRLIDGPAGMWCAQ--VGYGRREIVDAMAHQAMVLPY-ASP-WYMATSPAARLAEKIATLTP--GDLNRIFFTTGGS 124 (476)
T ss_dssp TTCCEEEETTHHHHTCT--TCBCCHHHHHHHHHHHHHCCC-CCT-TTCBCHHHHHHHHHHHTTSS--TTCCEEEEESSHH
T ss_pred CCCCEEEECCCchhhcc--CCCCCHHHHHHHHHHHHhccC-ccc-CccCCHHHHHHHHHHHhcCC--CCcCEEEEeCchH
Confidence 35788999988842211 23 479999999998875321 122 14556788888888887654 3457999999999
Q ss_pred HHHHHHHHHhcC--------CCCEEEEcCCCCcchHHHHHhCCCe-------------EEEeeccCC-CCCCCC------
Q 014936 111 QAIDVAMALLSR--------PGANILLPRPGFPIYELSAAFRHIE-------------VRHFDLLPD-KGWEVD------ 162 (415)
Q Consensus 111 ~al~~~~~~l~~--------~gd~vi~~~p~y~~~~~~~~~~g~~-------------~~~~~~~~~-~~~~~~------ 162 (415)
+|+..+++.+.. .++.|++.+|+|+++...+...+.. +..++.... ..+..+
T Consensus 125 eA~~~Aik~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 204 (476)
T 3i5t_A 125 TAVDSALRFSEFYNNVLGRPQKKRIIVRYDGYHGSTALTAACTGRTGNWPNFDIAQDRISFLSSPNPRHAGNRSQEAFLD 204 (476)
T ss_dssp HHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHTCCCGGGCTTSCCCCTTEEEECCCCGGGCTTSCHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCcCcCChhhccccCChhhccccCCCCCCcEEeCCCcccccCCCchHHHHH
Confidence 999999999853 3579999999999887666544322 122221100 001122
Q ss_pred --hhHHHhhcC----CCceEEEecCCCCcccc-CCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCccccc-ccCCC
Q 014936 163 --LDDIESLAD----QNTVALVIINPGNPCGN-VYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMG-VFGST 234 (415)
Q Consensus 163 --~~~l~~~~~----~~~~~v~i~~p~nptG~-~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~-~~~~~ 234 (415)
+++|++.++ +++.++++..++|++|. +++.+.+++|.++|++||+++|+||+|.++...|... .+. .++..
T Consensus 205 ~~~~~le~~i~~~~~~~~aavi~ep~~~~~G~~~~~~~~L~~l~~lc~~~gillI~DEv~~g~gr~G~~~-~~~~~~~v~ 283 (476)
T 3i5t_A 205 DLVQEFEDRIESLGPDTIAAFLAEPILASGGVIIPPAGYHARFKAICEKHDILYISDEVVTGFGRCGEWF-ASEKVFGVV 283 (476)
T ss_dssp HHHHHHHHHHHHHCGGGEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSC-HHHHTTCCC
T ss_pred HHHHHHHHHHHhcCCCCEEEEEECCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEecccCCccccCce-eeecccCCC
Confidence 678888775 23455555555778885 7899999999999999999999999999877666422 222 23322
Q ss_pred CCeEEEccCccccCCCC-ceEEEEEeeCCCCCCChHHHHHHHHhh--------ccccCCchhHHHHHHHHhhCCCcHHHH
Q 014936 235 VPILTLGSLSKRWIVPG-WRLGWFVTTDPCGMFRKPKVVERMKKY--------FDILGDPATFIQAAVPSILQQPDEVFF 305 (415)
Q Consensus 235 ~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~a~~~~l~~~~~~~~ 305 (415)
++++ ++||+++ .| +|+|++++++ ++++.+... ...+++.+++++.++.++|+...+
T Consensus 284 pdi~---t~sK~l~-~G~~plg~v~~~~--------~i~~~~~~~~~~~~~~~~~~t~~~np~a~aAa~aaL~~~~~--- 348 (476)
T 3i5t_A 284 PDII---TFAKGVT-SGYVPLGGLAISE--------AVLARISGENAKGSWFTNGYTYSNQPVACAAALANIELMER--- 348 (476)
T ss_dssp CSEE---EECGGGG-TTSSCCEEEEECH--------HHHHTTSGGGCTTCEECCCCTTTTCHHHHHHHHHHHHHHHH---
T ss_pred cchh---hhhhhhc-CCCcCeEEEEECH--------HHHHHHhcCCcccccccccCCCCcCHHHHHHHHHHHHHHHh---
Confidence 3333 6789976 48 9999999965 677777642 123567899999999998864211
Q ss_pred HHHHHHHHHHHHHHHHHhhcC---CCCcCCCCCCCceEEEEecCccccCCCC------CHHHHHHHHHhhcCeEEEcCCC
Q 014936 306 KKTLNLLKQSVDICYNKIKEI---PCISCPHKPEGSMAVMLKLNLSLLDDII------DDIDFCFKLAKEESVIILPGTA 376 (415)
Q Consensus 306 ~~~~~~~~~~~~~l~~~l~~~---~~~~~~~~p~~g~~~~~~l~~~~~~~~~------~~~~~~~~ll~~~gi~v~~g~~ 376 (415)
+...++++++.+++.+.|+.+ |.+. . .+..|.++++.+......... ....+...+ .++||.+.|..
T Consensus 349 ~~~~~~~~~~~~~l~~~L~~l~~~~~v~-~-v~~~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~Gv~v~~~g- 424 (476)
T 3i5t_A 349 EGIVDQAREMADYFAAALASLRDLPGVA-E-TRSVGLVGCVQCLLDPTRADGTAEDKAFTLKIDERC-FELGLIVRPLG- 424 (476)
T ss_dssp TTHHHHHHHHHHHHHHHHHTTTTSTTEE-E-EEEETTEEEEEECCC-----CCHHHHHHHHHHHHHH-HHTTEECEEET-
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCeE-E-EEecCceeEEEEecCccccccccchhHHHHHHHHHH-HHCCCEEEecC-
Confidence 345666777777777777654 3333 2 344566777777532100000 033455555 45699998842
Q ss_pred CCCCCeEEEEe--eCChhhHHHHHHHHHHHHHHHHHHh
Q 014936 377 VGLKNWLRVTF--AVDPYSLEECLDRIKSFYQRHAKQL 412 (415)
Q Consensus 377 ~~~~~~iRi~~--~~~~~~l~~~l~~l~~~~~~~~~~~ 412 (415)
+++||++ ..+++++++++++|++++++..+++
T Consensus 425 ----~~iRi~p~l~~t~e~i~~~l~~l~~~l~~~~~~~ 458 (476)
T 3i5t_A 425 ----DLCVISPPLIISRAQIDEMVAIMRQAITEVSAAH 458 (476)
T ss_dssp ----TEEEECCCTTCCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred ----CEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHh
Confidence 7999995 6799999999999999999877654
No 165
>3hmu_A Aminotransferase, class III; structural genomics, pyridoxal phosphate, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi}
Probab=99.97 E-value=2.4e-29 Score=242.62 Aligned_cols=352 Identities=15% Similarity=0.137 Sum_probs=232.3
Q ss_pred ccCcceeEecccCCCCCCCCC-CcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChH
Q 014936 32 KNEKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCT 110 (415)
Q Consensus 32 ~~~~~~i~l~~g~~~~~~~~~-~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~ 110 (415)
.+++.++||..|..... ++ .+|.+++|+.+++..... .|....+..+.+.++++.+.+..+ ...++|++++|++
T Consensus 52 ~~G~~ylD~~s~~~~~~--lGh~~p~v~~A~~~~~~~~~~-~~~~~~~~~~~~~~lae~l~~~~~--~~~~~v~~~~sGs 126 (472)
T 3hmu_A 52 SEGEEILDAMAGLWCVN--IGYGRDELAEVAARQMRELPY-YNTFFKTTHVPAIALAQKLAELAP--GDLNHVFFAGGGS 126 (472)
T ss_dssp TTCCEEECTTHHHHTCT--TCBCCHHHHHHHHHHHHHCSC-CCSSSSEECHHHHHHHHHHHHHSC--TTEEEEEEESSHH
T ss_pred CCCCEEEECCCchhhcc--CCCCCHHHHHHHHHHHHhccc-cccccccCCHHHHHHHHHHHHhCC--CCCCEEEEeCCHH
Confidence 35778999988842111 22 479999999998875331 222222334555555555555433 4567999999999
Q ss_pred HHHHHHHHHhcC--------CCCEEEEcCCCCcchHHHHHhCCC------------eEEEeeccC--C-CCCCCC-----
Q 014936 111 QAIDVAMALLSR--------PGANILLPRPGFPIYELSAAFRHI------------EVRHFDLLP--D-KGWEVD----- 162 (415)
Q Consensus 111 ~al~~~~~~l~~--------~gd~vi~~~p~y~~~~~~~~~~g~------------~~~~~~~~~--~-~~~~~~----- 162 (415)
++++.+++.+.. +++.|++.+++|+++...+...+. .+..++... . +++ .+
T Consensus 127 eA~~~aik~a~~~~~~~g~~~~~~ii~~~~~yHg~t~~~~~~~~~~~~~~~~~~~~~~~~v~~p~~~~~~~~-~~~~~~~ 205 (472)
T 3hmu_A 127 EANDTNIRMVRTYWQNKGQPEKTVIISRKNAYHGSTVASSALGGMAGMHAQSGLIPDVHHINQPNWWAEGGD-MDPEEFG 205 (472)
T ss_dssp HHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHSCCHHHHHTTCCCSSEEEECCCCHHHHCTT-CCHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCCCCCCEEEEEcCcCCCccHHhhhccCChhhccccCCCCCcEEeCCCccccCCcc-cCHHHHH
Confidence 999999999874 468999999999987766554433 233343211 0 111 23
Q ss_pred ---hhHHHhhcC---CCceEEEecCC-CCccccC-CCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCC
Q 014936 163 ---LDDIESLAD---QNTVALVIINP-GNPCGNV-YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGST 234 (415)
Q Consensus 163 ---~~~l~~~~~---~~~~~v~i~~p-~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~ 234 (415)
+++|++.++ +...++++++| +|++|.+ .+.+.+++|.++|+++|+++|+||+|.++...|... ....++..
T Consensus 206 ~~~~~~le~~i~~~~~~~~aavi~epv~~~gG~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G~~~-a~~~~~v~ 284 (472)
T 3hmu_A 206 LARARELEEAILELGENRVAAFIAEPVQGAGGVIVAPDSYWPEIQRICDKYDILLIADEVICGFGRTGNWF-GTQTMGIR 284 (472)
T ss_dssp HHHHHHHHHHHHHHCGGGEEEEEECSSBSTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSC-HHHHHTCC
T ss_pred HHHHHHHHHHHHhcCCCCEEEEEEcCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEccccCCcccCccc-hhHHhCCC
Confidence 677887775 23445566666 6677765 488999999999999999999999999877665422 22223333
Q ss_pred CCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhh---ccccCCchhHHHHHHHHhhCCCcHHHHHHHHHH
Q 014936 235 VPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKY---FDILGDPATFIQAAVPSILQQPDEVFFKKTLNL 311 (415)
Q Consensus 235 ~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~ 311 (415)
.+++ +|||+++.+|+|+||+++++ ++++.+... ...+++.+++++.++.++|+...+ +...++
T Consensus 285 pdi~---t~sK~l~gg~~plG~v~~~~--------~i~~~~~~~~~~~~~t~~~np~a~aAa~aaL~~~~~---~~~~~~ 350 (472)
T 3hmu_A 285 PHIM---TIAKGLSSGYAPIGGSIVCD--------EVAHVIGKDEFNHGYTYSGHPVAAAVALENLRILEE---ENILDH 350 (472)
T ss_dssp CSEE---EECGGGTTTSSCCEEEEEEH--------HHHHHHTTSCBCCCCTTTTCHHHHHHHHHHHHHHHH---TTHHHH
T ss_pred Ccee---eechhhhcCCcceEEEEECH--------HHHHhcccCCccccCCCCCCHHHHHHHHHHHHHHHH---hHHHHH
Confidence 3333 67899776669999999975 788887322 123567889999999988864211 234555
Q ss_pred HH-HHHHHHHHHhhc---CCCCcCCCCCCCceEEEEecCccccC--CC-----CCHHHHHHHHHhhcCeEEEcCCCCCCC
Q 014936 312 LK-QSVDICYNKIKE---IPCISCPHKPEGSMAVMLKLNLSLLD--DI-----IDDIDFCFKLAKEESVIILPGTAVGLK 380 (415)
Q Consensus 312 ~~-~~~~~l~~~l~~---~~~~~~~~~p~~g~~~~~~l~~~~~~--~~-----~~~~~~~~~ll~~~gi~v~~g~~~~~~ 380 (415)
++ ++.+++.+.|++ +|.+. . .+..|.++++.+...... .. ....++...+ .++||.+.|+.
T Consensus 351 ~~~~~~~~l~~~L~~l~~~~~v~-~-vr~~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~Gv~v~~~g----- 422 (472)
T 3hmu_A 351 VRNVAAPYLKEKWEALTDHPLVG-E-AKIVGMMASIALTPNKASRAKFASEPGTIGYICRERC-FANNLIMRHVG----- 422 (472)
T ss_dssp HHHTHHHHHHHHHHGGGGSTTEE-E-EEEETTEEEEEECSCGGGTCCBSSCTTHHHHHHHHHH-HHTTBCCEEET-----
T ss_pred HHHHHHHHHHHHHHHHhcCCCeE-E-EEecCceEEEEEecCccccccccchhHHHHHHHHHHH-HHCCcEEEecC-----
Confidence 55 566666666654 34343 2 344566777776431100 00 0034555555 46699999863
Q ss_pred CeEEEEe--eCChhhHHHHHHHHHHHHHHHHHHh
Q 014936 381 NWLRVTF--AVDPYSLEECLDRIKSFYQRHAKQL 412 (415)
Q Consensus 381 ~~iRi~~--~~~~~~l~~~l~~l~~~~~~~~~~~ 412 (415)
+++||++ ..+++++++++++|++++++...++
T Consensus 423 ~~iRi~p~~~~t~e~i~~~l~~l~~~l~~~~~~~ 456 (472)
T 3hmu_A 423 DRMIISPPLVITPAEIDEMFVRIRKSLDEAQAEI 456 (472)
T ss_dssp TEEEECCCTTCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 7999996 5799999999999999998876554
No 166
>3ndn_A O-succinylhomoserine sulfhydrylase; seattle structural genomics center for infectious disease, S mycobacterium, PLP, schiff base; HET: LLP; 1.85A {Mycobacterium tuberculosis}
Probab=99.97 E-value=4.7e-29 Score=236.17 Aligned_cols=286 Identities=14% Similarity=0.103 Sum_probs=205.1
Q ss_pred CcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHh----CCCeEEEeec
Q 014936 78 GLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAF----RHIEVRHFDL 153 (415)
Q Consensus 78 g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~----~g~~~~~~~~ 153 (415)
...+|++.+++++ ..+++++++||++++..++.+++++||+|+++.|+|+++...+.. .|.++..++.
T Consensus 82 ~~~~l~~~la~~~--------g~~~~~~~~sG~~Ai~~al~~l~~~Gd~Vi~~~~~y~~~~~~~~~~~~~~g~~~~~v~~ 153 (414)
T 3ndn_A 82 TVSVFEERLRLIE--------GAPAAFATASGMAAVFTSLGALLGAGDRLVAARSLFGSCFVVCSEILPRWGVQTVFVDG 153 (414)
T ss_dssp HHHHHHHHHHHHH--------TCSEEEEESSHHHHHHHHHHTTCCTTCEEEEESCCCHHHHHHHHTHHHHTTCEEEEECT
T ss_pred HHHHHHHHHHHHH--------CCCcEEEECCHHHHHHHHHHHHhCCCCEEEEcCCccchHHHHHHHHHHHcCcEEEEeCC
Confidence 4566777777766 246889999999999999999999999999999999998776644 8999998875
Q ss_pred cCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCC
Q 014936 154 LPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS 233 (415)
Q Consensus 154 ~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~ 233 (415)
+ |+++|++++++++++|++++|+||||.+.+ +++|+++|+++|+++|+|++|+...+. .++ .++.
T Consensus 154 ~-------d~~~l~~ai~~~t~~v~le~p~NptG~~~~---l~~i~~la~~~g~~livDe~~~~~~~~----~~~-~~g~ 218 (414)
T 3ndn_A 154 D-------DLSQWERALSVPTQAVFFETPSNPMQSLVD---IAAVTELAHAAGAKVVLDNVFATPLLQ----QGF-PLGV 218 (414)
T ss_dssp T-------CHHHHHHHTSSCCSEEEEESSCTTTCCCCC---HHHHHHHHHHTTCEEEEECTTTHHHHC----CCG-GGTC
T ss_pred C-------CHHHHHHhcCCCCeEEEEECCCCCCCcccc---HHHHHHHHHHcCCEEEEECCCcccccC----Cch-hcCC
Confidence 2 799999999999999999999999999955 778899999999999999999853321 111 2222
Q ss_pred CCCeEEEccCccccCCCC-ceEEEEEeeCCCCCCChHHHHH-HHHhh-ccccCCchhHHHHHHHHhhCCCcHHHHHHHHH
Q 014936 234 TVPILTLGSLSKRWIVPG-WRLGWFVTTDPCGMFRKPKVVE-RMKKY-FDILGDPATFIQAAVPSILQQPDEVFFKKTLN 310 (415)
Q Consensus 234 ~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~ 310 (415)
.+++.|+||.++.+| +++|++++++ +.+. .++.. .......++....++...++. +..+.+
T Consensus 219 ---div~~S~sK~l~~~G~~~~G~vv~~~--------~~~~~~l~~~~~~~g~~~~~~~a~~~~~~l~~-----l~~r~~ 282 (414)
T 3ndn_A 219 ---DVVVYSGTKHIDGQGRVLGGAILGDR--------EYIDGPVQKLMRHTGPAMSAFNAWVLLKGLET-----LAIRVQ 282 (414)
T ss_dssp ---SEEEEETTTTTTCSSCCCCEEEEECH--------HHHTTHHHHHHHHHCCCCCHHHHHHHHHHGGG-----HHHHHH
T ss_pred ---CeEeccCCccccCCCCceEEEEEECH--------HHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHH-----HHHHHH
Confidence 388899999998888 8999999865 3333 44433 223344566655555555543 566777
Q ss_pred HHHHHHHHHHHHhhcCCCCcCCCCCC----------------CceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcC
Q 014936 311 LLKQSVDICYNKIKEIPCISCPHKPE----------------GSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPG 374 (415)
Q Consensus 311 ~~~~~~~~l~~~l~~~~~~~~~~~p~----------------~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g 374 (415)
+..++++.+.+.|++.|++..+.+|. .|.++++.++............++.. ++..++.+++|
T Consensus 283 ~~~~~a~~l~~~L~~~p~v~~v~~p~l~~~p~~~~~~~~~~g~G~~l~~~l~~~~~~~~~~~~~~~~~-l~~~~~~~s~G 361 (414)
T 3ndn_A 283 HSNASAQRIAEFLNGHPSVRWVRYPYLPSHPQYDLAKRQMSGGGTVVTFALDCPEDVAKQRAFEVLDK-MRLIDISNNLG 361 (414)
T ss_dssp HHHHHHHHHHHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEECSCGGGHHHHHHHHHHH-CSSSEECSCCS
T ss_pred HHHHHHHHHHHHHhcCCCEeEEECCCCCCCcCHHHHHHhCCCCceEEEEEEcCCccccHHHHHHHHHh-CccceEcCCCC
Confidence 88888899999998887765343443 47788888853100000113344444 35567777777
Q ss_pred CCCC-----------------------CCCeEEEEeeCChhhHHHHHHHHHHHH
Q 014936 375 TAVG-----------------------LKNWLRVTFAVDPYSLEECLDRIKSFY 405 (415)
Q Consensus 375 ~~~~-----------------------~~~~iRi~~~~~~~~l~~~l~~l~~~~ 405 (415)
..+. .+++||+|++. |+.+.+++.|.+++
T Consensus 362 ~~~sl~~~p~~~~~~~~~~~~~~~~g~~~~~iRlsvG~--e~~~dli~dl~~al 413 (414)
T 3ndn_A 362 DAKSLVTHPATTTHRAMGPEGRAAIGLGDGVVRISVGL--EDTDDLIADIDRAL 413 (414)
T ss_dssp CSSCEEECGGGTTTCTTHHHHHHHTTCCTTEEEEECCS--SCHHHHHHHHHHHH
T ss_pred CCCceeeCccccccccCCHHHHHhcCCCCCeEEEEeCc--CCHHHHHHHHHHhh
Confidence 6532 15789999985 45556666666554
No 167
>3n0l_A Serine hydroxymethyltransferase; alpha beta class, 3-layer(ABA) sandwich, CSGI transferase, structural genomics; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=99.97 E-value=2e-29 Score=240.37 Aligned_cols=337 Identities=14% Similarity=0.078 Sum_probs=221.0
Q ss_pred cceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCC------CCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCC
Q 014936 35 KKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYA------PTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSG 108 (415)
Q Consensus 35 ~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~------~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g 108 (415)
...++|..+. .+.++.+++++.+.+.......|+ ......++++.+.+++.+.+| +++++|++++|
T Consensus 25 ~~~i~l~~~~------~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g--~~~~~i~~~sG 96 (417)
T 3n0l_A 25 CEGLEMIASE------NFTLPEVMEVMGSILTNKYAEGYPGKRYYGGCEFVDEIETLAIERCKKLFN--CKFANVQPNSG 96 (417)
T ss_dssp HHSEECCTTC------CCCCHHHHHHHTBGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHHT--CSEEECCCSSH
T ss_pred hcCeeeeccc------CCCCHHHHHHHhhhhhccccccCCCccccccchHHHHHHHHHHHHHHHHhC--CCCcceEeccH
Confidence 3467776654 334789999998877432212222 222334555533333333333 45667877777
Q ss_pred hHHHHHHHHHHhcCCCCEEEEcCCCCcchHH---HHHhCC--CeEEEeeccCCCCCCCChhHHHhhcC-CCceEEEecCC
Q 014936 109 CTQAIDVAMALLSRPGANILLPRPGFPIYEL---SAAFRH--IEVRHFDLLPDKGWEVDLDDIESLAD-QNTVALVIINP 182 (415)
Q Consensus 109 ~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~---~~~~~g--~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~v~i~~p 182 (415)
++++.+++.++.++||+|+++.|+|+++.. .....| ..+..++++ .++.+|+++|+++++ +++++|++++|
T Consensus 97 -t~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~~d~~~l~~~i~~~~~~~v~~~~~ 173 (417)
T 3n0l_A 97 -SQANQGVYAALINPGDKILGMDLSHGGHLTHGAKVSSSGKMYESCFYGVE--LDGRIDYEKVREIAKKEKPKLIVCGAS 173 (417)
T ss_dssp -HHHHHHHHHHHSCTTCEEEEECC----------------CCSEEEEECCC--TTSSCCHHHHHHHHHHHCCSEEEECCS
T ss_pred -HHHHHHHHHHhcCCCCEEEecccccccccchhhhhhhhcceeeeEeccCC--CCCCcCHHHHHHHHHhcCCeEEEECCc
Confidence 799999999999999999999999987654 223333 444555543 556799999999987 57889988888
Q ss_pred CCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCc-ccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeC
Q 014936 183 GNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHL-VFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTD 261 (415)
Q Consensus 183 ~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~-~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~ 261 (415)
+| |..++ +++|.++|+++|+++|+||+|... .+.+.....+. ...+++.|+||++ +|+|+||+++++
T Consensus 174 ~~--G~~~~---l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~~~-----~~di~~~s~sK~l--~g~~~G~~~~~~ 241 (417)
T 3n0l_A 174 AY--ARVID---FAKFREIADEIGAYLFADIAHIAGLVVAGEHPSPFP-----YAHVVSSTTHKTL--RGPRGGIIMTND 241 (417)
T ss_dssp SC--CSCCC---HHHHHHHHHHHTCEEEEECTTTHHHHHTTSSCCCTT-----TCSEEEEESSTTT--CSCSCEEEEESC
T ss_pred cc--CccCC---HHHHHHHHHHcCCEEEEECccchhhhhcccCCCccc-----cceEEEeeCcccc--CCCCeeEEEECC
Confidence 86 77766 788999999999999999997533 33333222222 1238889999985 788899999863
Q ss_pred CCCCCChHHHHHHHHhhccc--cCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCce
Q 014936 262 PCGMFRKPKVVERMKKYFDI--LGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSM 339 (415)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~ 339 (415)
+++.+.+...... ..+++...+.++..++.......+++..++++++++++.+.|++. ++.....+..++
T Consensus 242 -------~~~~~~~~~~~~~~~~~~~~~~~~aa~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~ 313 (417)
T 3n0l_A 242 -------EELAKKINSAIFPGIQGGPLMHVIAAKAVGFKFNLSDEWKVYAKQVRTNAQVLANVLMDR-KFKLVSDGTDNH 313 (417)
T ss_dssp -------HHHHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHT-TCEEGGGSCSSS
T ss_pred -------HHHHHHHhhhhCCcccCCcHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhC-CceeccCCCCce
Confidence 2577777665332 234445555555545443223567888899999999999999884 776332235567
Q ss_pred EEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCC------CCeEEEEee------CChhhHHHHHHHHHHHHHH
Q 014936 340 AVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGL------KNWLRVTFA------VDPYSLEECLDRIKSFYQR 407 (415)
Q Consensus 340 ~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~------~~~iRi~~~------~~~~~l~~~l~~l~~~~~~ 407 (415)
++|+.++... .+.. .+..+|.++||.+.++..+.. .+.+|+++. .+++++++++++|++++++
T Consensus 314 ~~~~~~~~~~----~~~~-~~~~~l~~~gi~v~~~~~~~~~~~~~~~~~~ri~~~~~~~~~~~~~~i~~~~~~l~~~l~~ 388 (417)
T 3n0l_A 314 LVLMSFLDRE----FSGK-DADLALGNAGITANKNTVPGEIRSPFITSGLRLGTPALTARGFKEKEMEIVSNYIADILDD 388 (417)
T ss_dssp EEEEECTTSS----SCHH-HHHHHHHHTTEECEECCCTTCCSCTTTCSEEEEECHHHHHTTCCHHHHHHHHHHHHHHHHT
T ss_pred EEEEEcccCC----CCHH-HHHHHHHHcCeEEeccccCCCCcccCCCCeeEecCHHHhhCCCCHHHHHHHHHHHHHHHhc
Confidence 8888775321 1344 445566788999987654322 367999983 4679999999999998864
No 168
>2cy8_A D-phgat, D-phenylglycine aminotransferase; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; 2.30A {Pseudomonas stutzeri}
Probab=99.97 E-value=2.4e-29 Score=242.35 Aligned_cols=335 Identities=15% Similarity=0.075 Sum_probs=218.6
Q ss_pred cCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHH
Q 014936 33 NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQA 112 (415)
Q Consensus 33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~a 112 (415)
.++.++||+.|.+....++ .+|.+++++.+.+.... .|+ +..++++++++++.+..+ .++++++++|++++
T Consensus 55 ~g~~~iD~~~~~~~~~lg~-~~~~v~~a~~~~~~~~~--~~~---~~~~~~~~la~~l~~~~~---~~~~v~~~~gg~eA 125 (453)
T 2cy8_A 55 DGNVYLDFFGGHGALVLGH-GHPRVNAAIAEALSHGV--QYA---ASHPLEVRWAERIVAAFP---SIRKLRFTGSGTET 125 (453)
T ss_dssp TCCEEEESCTTTTSCTTCB-TCHHHHHHHHHHHTTTC--SSC---SSCHHHHHHHHHHHHHCT---TCSEEEEESCHHHH
T ss_pred CCCEEEECcccHhhcccCC-CCHHHHHHHHHHHHhCC--CCC---CCCHHHHHHHHHHHhhCC---CCCEEEEeCCHHHH
Confidence 3667899988864322223 68999999999987643 222 346899999999988765 57899999999999
Q ss_pred HHHHHHH---hcCCCCEEEEcCCCCcchHHHHHh-----------CCCe------EEEeeccCCCCCCCChhHHHhhcCC
Q 014936 113 IDVAMAL---LSRPGANILLPRPGFPIYELSAAF-----------RHIE------VRHFDLLPDKGWEVDLDDIESLADQ 172 (415)
Q Consensus 113 l~~~~~~---l~~~gd~vi~~~p~y~~~~~~~~~-----------~g~~------~~~~~~~~~~~~~~~~~~l~~~~~~ 172 (415)
+..++++ +.++ +.|++.+|+|+++...+.. .|.. +..++. .|+++|++.+++
T Consensus 126 ~~~al~~ar~~~~~-~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-------~d~~~le~~l~~ 197 (453)
T 2cy8_A 126 TLLALRVARAFTGR-RMILRFEGHYHGWHDFSASGYNSHFDGQPAPGVLPETTANTLLIRP-------DDIEGMREVFAN 197 (453)
T ss_dssp HHHHHHHHHHHHCC-CEEEEECC----------------------------CGGGEEEECT-------TCHHHHHHHHHH
T ss_pred HHHHHHHHHHhhCC-CEEEEEcCCcCCCchhhHhhcCCccCCCcCCCCCccccCceeecCC-------CCHHHHHHHHHh
Confidence 9999998 6654 6888889999876553321 1221 222221 388999988863
Q ss_pred --CceEEEecCC-CCccccC-CCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccC
Q 014936 173 --NTVALVIINP-GNPCGNV-YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWI 248 (415)
Q Consensus 173 --~~~~v~i~~p-~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~ 248 (415)
...++++++| +|+||.+ .+.+.+++|.++|++||+++|+||+|.++ ..+. ...+..++...+ +.|+||+++
T Consensus 198 ~~~~~~~vi~ep~~~~tG~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~-~~g~-~~~~~~~~~~~d---i~s~sK~l~ 272 (453)
T 2cy8_A 198 HGSDIAAFIAEPVGSHFGVTPVSDSFLREGAELARQYGALFILDEVISGF-RVGN-HGMQALLDVQPD---LTCLAKASA 272 (453)
T ss_dssp HGGGEEEEEECSSEHHHHTEECCHHHHHHHHHHHHHTTCEEEEECTTTTT-TTCT-THHHHHHTCCCS---EEEEEGGGG
T ss_pred cCCCEEEEEECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecCcccc-ccCc-hhhhHHhCCCCc---EEEEChhhh
Confidence 2334566666 4779976 57999999999999999999999999976 4432 111222222222 238999987
Q ss_pred CCCceEEEEEeeCCCCCCChHHHHHHHHh---h---ccccCCchhHHHHHHHHhhCC-CcHHHHHHHHHHHHHHHHHHHH
Q 014936 249 VPGWRLGWFVTTDPCGMFRKPKVVERMKK---Y---FDILGDPATFIQAAVPSILQQ-PDEVFFKKTLNLLKQSVDICYN 321 (415)
Q Consensus 249 ~~G~r~G~~~~~~~~~~~~~~~~~~~~~~---~---~~~~~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~~~l~~ 321 (415)
. |+|+||+++++ ++++.+.. . ...+++.+++++.++.++|+. . .++..++++++++++.+
T Consensus 273 ~-G~~~G~v~~~~--------~~~~~l~~~~~~~~~~~~t~~~n~~~~aa~~aal~~~~----~~~~~~~~~~~~~~l~~ 339 (453)
T 2cy8_A 273 G-GLPGGILGGRE--------DVMGVLSRGSDRKVLHQGTFTGNPITAAAAIAAIDTIL----EDDVCAKINDLGQFARE 339 (453)
T ss_dssp T-TSSCEEEEECH--------HHHTTSSSCC---------CCCCHHHHHHHHHHHHHHH----HTTHHHHHHHHHHHHHH
T ss_pred C-CcceEEEechH--------HHHHHhccccCCCceeCCCCCCCHHHHHHHHHHHHHHh----hhhHHHHHHHHHHHHHH
Confidence 4 89999999865 56665544 1 122456788888888888753 2 13455666777777777
Q ss_pred HhhcCC---CCcCCCCCCCceEEEEecCc-----c----ccC-----CCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEE
Q 014936 322 KIKEIP---CISCPHKPEGSMAVMLKLNL-----S----LLD-----DIIDDIDFCFKLAKEESVIILPGTAVGLKNWLR 384 (415)
Q Consensus 322 ~l~~~~---~~~~~~~p~~g~~~~~~l~~-----~----~~~-----~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iR 384 (415)
.|+++. ++... .+..|.++|+.++. . ... +.....++...++ ++||.+.|+ +.+|
T Consensus 340 ~L~~~~~~~~~~~~-~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~Gv~v~~~------~~~~ 411 (453)
T 2cy8_A 340 AMNHLFARKGLNWL-AYGRFSGFHLMPGLPPNTTDTGSITRAEVARPDVKMIAAMRMALI-LEGVDIGGR------GSVF 411 (453)
T ss_dssp HHHHHHHHTTCCEE-EECCTTEEEEEETSCTTCCCCHHHHTTCSCCCCHHHHHHHHHHHH-HTTEECBTT------TEEE
T ss_pred HHHHHHhhCCCcEE-EEEeeeEEEEEEeccccccccccccccccccccHHHHHHHHHHHH-HCCeEEeCC------CCEE
Confidence 766431 22212 35567788988863 1 000 0001345666665 569999653 3478
Q ss_pred EEeeCChhhHHHHHHHHHHHHHHHHH
Q 014936 385 VTFAVDPYSLEECLDRIKSFYQRHAK 410 (415)
Q Consensus 385 i~~~~~~~~l~~~l~~l~~~~~~~~~ 410 (415)
+++..+++++++++++|+++++++.+
T Consensus 412 l~~~~t~~~i~~~l~~l~~~l~~~~~ 437 (453)
T 2cy8_A 412 LSAQHEREHVEHLVTTFDRVLDRLAD 437 (453)
T ss_dssp CCTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred eeccCCHHHHHHHHHHHHHHHHHHHh
Confidence 77778999999999999999887643
No 169
>1gc0_A Methionine gamma-lyase; pyridoxal-5'-phosphate; HET: LLP; 1.70A {Pseudomonas putida} SCOP: c.67.1.3 PDB: 1gc2_A* 1pg8_A* 1ukj_A* 2o7c_A*
Probab=99.97 E-value=3.2e-28 Score=230.39 Aligned_cols=280 Identities=17% Similarity=0.177 Sum_probs=201.4
Q ss_pred CCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHH----HhCCCeEEEee
Q 014936 77 AGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSA----AFRHIEVRHFD 152 (415)
Q Consensus 77 ~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~----~~~g~~~~~~~ 152 (415)
....++++.++++++ . ++.+++++|++++..++.++.++||+|+++.|+|+++...+ ...|.++..++
T Consensus 65 ~~~~~l~~~la~~~g------~--~~~i~~~sG~~a~~~~l~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 136 (398)
T 1gc0_A 65 PTLNLLEARMASLEG------G--EAGLALASGMGAITSTLWTLLRPGDEVLLGNTLYGCTFAFLHHGIGEFGVKLRHVD 136 (398)
T ss_dssp HHHHHHHHHHHHHHT------C--SEEEEESSHHHHHHHHHHHHCCTTCEEEEESSCCSHHHHHHHHTGGGGTCEEEEEC
T ss_pred hHHHHHHHHHHHHhC------C--CcEEEECCHHHHHHHHHHHHhcCCCEEEEeCCCchhHHHHHHHHHHHcCCEEEEEC
Confidence 467889999999883 2 35666667789999999999999999999999999887765 66788888886
Q ss_pred ccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccC
Q 014936 153 LLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFG 232 (415)
Q Consensus 153 ~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~ 232 (415)
. .|++++++.+++++++|++++|+||||.+.+ +++|+++|+++|+++|+|++|..+.+.. ++ ..+
T Consensus 137 ~-------~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~D~~~~~~~~~~----~~-~~~ 201 (398)
T 1gc0_A 137 M-------ADLQALEAAMTPATRVIYFESPANPNMHMAD---IAGVAKIARKHGATVVVDNTYCTPYLQR----PL-ELG 201 (398)
T ss_dssp T-------TCHHHHHHHCCTTEEEEEEESSCTTTCCCCC---HHHHHHHHGGGTCEEEEECTTTHHHHCC----GG-GGT
T ss_pred C-------CCHHHHHHhcCCCCeEEEEECCCCCCccccc---HHHHHHHHHHcCCEEEEECCCcccccCC----ch-hhC
Confidence 5 2799999999989999999999999999975 8888999999999999999998765431 12 122
Q ss_pred CCCCeEEEccCccccCCCCceE-EEEEeeCCCCCCChHHHHH-HHHhhcc--ccCCchhHHHHHHHHhhCCCcHHHHHHH
Q 014936 233 STVPILTLGSLSKRWIVPGWRL-GWFVTTDPCGMFRKPKVVE-RMKKYFD--ILGDPATFIQAAVPSILQQPDEVFFKKT 308 (415)
Q Consensus 233 ~~~~~i~~~s~sK~~~~~G~r~-G~~~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~~~~~a~~~~l~~~~~~~~~~~ 308 (415)
..+++.|+||.++.+|.|+ ||+++++ +.++ .++.... .+++.++..+.++...++. +..+
T Consensus 202 ---~d~~~~S~sK~~~~~~~~~~G~l~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-----~~~~ 265 (398)
T 1gc0_A 202 ---ADLVVHSATKYLSGHGDITAGIVVGSQ--------ALVDRIRLQGLKDMTGAVLSPHDAALLMRGIKT-----LNLR 265 (398)
T ss_dssp ---CSEEEEETTTTTTCSSSCCCEEEEECH--------HHHHHHHHTHHHHHTCCCCCHHHHHHHHHHHTT-----HHHH
T ss_pred ---ceEEEECCccccCCCCCCeEEEEEECh--------HHHHHHHHHHhhccCCCCCCHHHHHHHHhccch-----HHHH
Confidence 3488899999999999998 9988864 3443 4544432 2456788888887777764 4555
Q ss_pred HHHHHHHHHHHHHHhhcCCCCcCCC-------------CC---CCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEE
Q 014936 309 LNLLKQSVDICYNKIKEIPCISCPH-------------KP---EGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIIL 372 (415)
Q Consensus 309 ~~~~~~~~~~l~~~l~~~~~~~~~~-------------~p---~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~ 372 (415)
.++..++++.+.+.|++++.+..+. .+ ..+.++.+.++. ..+....++.+.++.+.
T Consensus 266 ~~~~~~~~~~l~~~L~~~~~v~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~--------~~~~~~~~l~~~~i~~~ 337 (398)
T 1gc0_A 266 MDRHCANAQVLAEFLARQPQVELIHYPGLASFPQYTLARQQMSQPGGMIAFELKG--------GIGAGRRFMNALQLFSR 337 (398)
T ss_dssp HHHHHHHHHHHHHHHHTCTTEEEEEEC----------------CCTTEEEEEETT--------HHHHHHHHHHHCSSSEE
T ss_pred HHHHHHHHHHHHHHHhcCCCeeEEECCCCCCCcCHHHHHhhCCCCceEEEEEECC--------CHHHHHHHHHhCCCcee
Confidence 6666777777777777654322111 11 235566666642 33445666777788776
Q ss_pred c---CCC------C----------------CC-CCeEEEEeeC--ChhhHHHHHHHHHH
Q 014936 373 P---GTA------V----------------GL-KNWLRVTFAV--DPYSLEECLDRIKS 403 (415)
Q Consensus 373 ~---g~~------~----------------~~-~~~iRi~~~~--~~~~l~~~l~~l~~ 403 (415)
. |+. + +. ++.||+|++. ++++++.+.+.|++
T Consensus 338 ~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iRis~g~~~~~~~i~~l~~al~~ 396 (398)
T 1gc0_A 338 AVSLGDAESLAQHPASMTHSSYTPEERAHYGISEGLVRLSVGLEDIDDLLADVQQALKA 396 (398)
T ss_dssp CSCCSCSSCEEECGGGTTTSSSCHHHHHHTTCCTTEEEEECCSSCHHHHHHHHHHHHHH
T ss_pred ccCCCCcceeeecccccccccCCHHHHHhcCCCCCeEEEEeCcCCHHHHHHHHHHHHHh
Confidence 5 422 0 11 4799999974 34555655555544
No 170
>1wyu_B Glycine dehydrogenase subunit 2 (P-protein); alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_B* 1wyv_B*
Probab=99.97 E-value=4.9e-29 Score=241.05 Aligned_cols=332 Identities=15% Similarity=0.106 Sum_probs=237.4
Q ss_pred ceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCC---CCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHH
Q 014936 36 KVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAP---TAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQA 112 (415)
Q Consensus 36 ~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~---~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~a 112 (415)
..+.|+ +... ...|.+.+++.+.+. .++.|.+ ..|..++++++++++.+..|.. ..+++++|++++
T Consensus 67 ~~~~lg-~~~~-----~~~p~v~~~~~~~~~--~~~~~~~~~~~~g~~~l~~~l~~~la~~~g~~---~~~~~~~ggt~a 135 (474)
T 1wyu_B 67 TFYPLG-SCTM-----KYNPKLHEEAARLFA--DLHPYQDPRTAQGALRLMWELGEYLKALTGMD---AITLEPAAGAHG 135 (474)
T ss_dssp SCCCBT-TTCC-----CCCCHHHHHHHHTTS--SCCTTSCGGGCHHHHHHHHHHHHHHHHHHTCS---EEECCCSSHHHH
T ss_pred Cccccc-cccc-----cCCHHHHHHHHHHHH--hcCCCCchhhChHHHHHHHHHHHHHHHHHCCC---ceeecChHHHHH
Confidence 456777 4311 223556666665422 2334443 4566788888888887766643 246788999999
Q ss_pred HHHHHHHh----cCCCC-----EEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCC
Q 014936 113 IDVAMALL----SRPGA-----NILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPG 183 (415)
Q Consensus 113 l~~~~~~l----~~~gd-----~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~ 183 (415)
+..++.++ .++|| +|+++.|+|+.+...++..|++++.++.+. ++.+|+++|++++++++++|++++|
T Consensus 136 ~~~al~~~~~~~~~~Gd~~~r~~Vlv~~~~h~~~~~~~~~~G~~vv~v~~~~--~~~~d~~~L~~~i~~~t~~v~~~~p- 212 (474)
T 1wyu_B 136 ELTGILIIRAYHEDRGEGRTRRVVLVPDSAHGSNPATASMAGYQVREIPSGP--EGEVDLEALKRELGPHVAALMLTNP- 212 (474)
T ss_dssp HHHHHHHHHHHHHHTTCTTTCCEEEEETTSCTHHHHHHHHTTCEEEEECBCT--TSSBCHHHHHHHCSTTEEEEEECSS-
T ss_pred HHHHHHHHHHHHHhcCCccCCCEEEEeCCcChhhHHHHHHCCCEEEEecCCC--CCCcCHHHHHHhhCCCceEEEEECC-
Confidence 99866554 35787 999999999999999999999999998753 4678999999999888999999998
Q ss_pred CccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCC-C---ceEEEEEe
Q 014936 184 NPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVP-G---WRLGWFVT 259 (415)
Q Consensus 184 nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~-G---~r~G~~~~ 259 (415)
||+|.+. +++++|+++|+++|+++|+|++|..+.++. .....++ ..+++.|+||+|+.+ | +|+||+++
T Consensus 213 n~~G~~~--~~l~~i~~l~~~~g~~li~Dea~~~~~~g~---~~~~~~g---~di~~~s~~K~~~~p~g~gG~~~G~~~~ 284 (474)
T 1wyu_B 213 NTLGLFE--RRILEISRLCKEAGVQLYYDGANLNAIMGW---ARPGDMG---FDVVHLNLHKTFTVPHGGGGPGSGPVGV 284 (474)
T ss_dssp CTTSCCC--TTHHHHHHHHHHHTCEEEEEGGGGGGTTTT---CCHHHHT---CSEEECCTTTTTCCCCTTSCCCCCCEEE
T ss_pred CCCcccC--CCHHHHHHHHHHcCCEEEEeCchhhhhccC---CCcccCC---CcEEEEeCccccccCCCCCCCCeEEEEE
Confidence 5899872 478999999999999999999998765421 1222233 238888999998766 4 59999999
Q ss_pred eCCCCCCChHHHHHHHHh-h-------------------ccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHH
Q 014936 260 TDPCGMFRKPKVVERMKK-Y-------------------FDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDIC 319 (415)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~-~-------------------~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l 319 (415)
++ ++++.+.. . .....+.+...+.++..++.....+++++..+++.++++++
T Consensus 285 ~~--------~l~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~l~~~g~~~l~~~~~~~~~~~~~l 356 (474)
T 1wyu_B 285 KA--------HLAPYLPVPLVERGEEGFYLDFDRPKSIGRVRSFYGNFLALVRAWAYIRTLGLEGLKKAAALAVLNARYL 356 (474)
T ss_dssp CG--------GGGGGCCSCEEEECSSCEEEECCCTTCCCCSSSTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cH--------HHHHhCCCCeeeccCCeeEecccCcccCcccccCcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 76 33333321 0 00112356677777777776434567888899999999999
Q ss_pred HHHhhcCCCCcCCCCCCCceE--EEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCC--CCCeEEEEeeC--Chhh
Q 014936 320 YNKIKEIPCISCPHKPEGSMA--VMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVG--LKNWLRVTFAV--DPYS 393 (415)
Q Consensus 320 ~~~l~~~~~~~~~~~p~~g~~--~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~--~~~~iRi~~~~--~~~~ 393 (415)
.+.|+++ ++.+. .+. +.+ +|+.++. + .+..++...+++ +||.+ |+..|. ..+++||+++. ++++
T Consensus 357 ~~~L~~~-g~~~~-~~~-~~~~~~~~~~~~----~-~~~~~l~~~L~~-~Gi~~-~~~~~~~~~~~~lRis~~~~~t~e~ 426 (474)
T 1wyu_B 357 KELLKEK-GYRVP-YDG-PSMHEFVAQPPE----G-FRALDLAKGLLE-LGFHP-PTVYFPLIVKEALMVEPTETEAKET 426 (474)
T ss_dssp HHHHHHT-TCBCS-SCS-SCCSCEEEBCST----T-CCHHHHHHHHHH-TTCCC-CEESCSTTSTTCEEECCCTTSCHHH
T ss_pred HHHHhhc-CcEec-CCC-CcceEEEEEcCC----C-CCHHHHHHHHHH-CCccc-cccccccccCCEEEEEeecCCCHHH
Confidence 9999987 77732 232 222 5656521 1 256777777754 59985 555553 36899999964 8999
Q ss_pred HHHHHHHHHHHHHH
Q 014936 394 LEECLDRIKSFYQR 407 (415)
Q Consensus 394 l~~~l~~l~~~~~~ 407 (415)
+++++++|++++++
T Consensus 427 id~~~~~L~~~~~~ 440 (474)
T 1wyu_B 427 LEAFAEAMGALLKK 440 (474)
T ss_dssp HHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHHHh
Confidence 99999999988754
No 171
>2epj_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.70A {Aeropyrum pernix} PDB: 2zsl_A* 2zsm_A*
Probab=99.97 E-value=1.5e-29 Score=242.40 Aligned_cols=336 Identities=15% Similarity=0.097 Sum_probs=224.1
Q ss_pred cCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHH
Q 014936 33 NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQA 112 (415)
Q Consensus 33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~a 112 (415)
+++.++||+.|.+....++ .+|.+.+++.+.+.......|+. ....++++.+++++ + ..+++++++|++++
T Consensus 54 ~g~~~lD~~~~~~~~~lG~-~~~~v~~a~~~~~~~~~~~~~~~-~~~~~l~~~la~~~----~---~~~~v~~~~sgseA 124 (434)
T 2epj_A 54 DGARIVDLVLAYGPLILGH-KHPRVLEAVEEALARGWLYGAPG-EAEVLLAEKILGYV----K---RGGMIRFVNSGTEA 124 (434)
T ss_dssp TCCEEEESSGGGTTCTTCB-TCHHHHHHHHHHHHTCSCCSSCC-HHHHHHHHHHHHHH----C---TTCEEEEESSHHHH
T ss_pred CCCEEEEcccchhcccCCC-CCHHHHHHHHHHHHhCCCCCCCC-HHHHHHHHHHHHhC----C---CCCEEEEeCCHHHH
Confidence 4677899998864322222 68999999999987643333432 22345555555554 2 47899999999999
Q ss_pred HHHHHHH---hcCCCCEEEEcCCCCcchHHHHH--------------hCCC------eEEEeeccCCCCCCCChhHHHhh
Q 014936 113 IDVAMAL---LSRPGANILLPRPGFPIYELSAA--------------FRHI------EVRHFDLLPDKGWEVDLDDIESL 169 (415)
Q Consensus 113 l~~~~~~---l~~~gd~vi~~~p~y~~~~~~~~--------------~~g~------~~~~~~~~~~~~~~~~~~~l~~~ 169 (415)
+..++++ +.+ ++.|++.+|+|+++...+. ..|+ ++..++. .|++.|++.
T Consensus 125 ~~~al~~ar~~~~-~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~-------~d~~~le~~ 196 (434)
T 2epj_A 125 TMTAIRLARGYTG-RDLILKFDGCYHGSHDAVLVAAGSAAAHYGVPTSAGVPEAVARLTLVTPY-------NDVEALERV 196 (434)
T ss_dssp HHHHHHHHHHHHC-CCEEEEEETCCCCSSGGGSEECC------CEESSTTCCHHHHTTEEEEET-------TCHHHHHHH
T ss_pred HHHHHHHHHHhhC-CCeEEEEcCCcCCCCHHHHHhcCCCccccCCCCCCCCCCcccCceEecCC-------CCHHHHHHH
Confidence 9999987 444 5788888999987554321 1132 2333332 378999988
Q ss_pred cCC--CceEEEecCC-CCccccCC-CHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCcc
Q 014936 170 ADQ--NTVALVIINP-GNPCGNVY-SYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSK 245 (415)
Q Consensus 170 ~~~--~~~~v~i~~p-~nptG~~~-~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK 245 (415)
+++ ...++++++| +|+||.++ +.+.+++|.++|++||+++|+||+|.++ ..+.. .....++...+ +.|+||
T Consensus 197 l~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~-~~g~~-~~~~~~~~~~d---i~s~sK 271 (434)
T 2epj_A 197 FAEYGDRIAGVIVEPVIANAGVIPPRREFLAALQRLSRESGALLILDEVVTGF-RLGLE-GAQGYFNIEGD---IIVLGK 271 (434)
T ss_dssp HHHHGGGEEEEEECSSBCSSSCBCCCHHHHHHHHHHHHHHTCEEEEEETTTTT-TSSTT-HHHHHHTCCCS---EEEEEG
T ss_pred HHhCCCCEEEEEEeCCcCCCCccCCCHHHHHHHHHHHHHcCCEEEEEcchhce-eCCcc-hhhHHhCCCCC---eeeecc
Confidence 863 2345566667 56799876 7999999999999999999999999976 33321 11222222222 348899
Q ss_pred ccCCCCceEEEEEeeCCCCCCChHHHHHHHHhh----ccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHH
Q 014936 246 RWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKY----FDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYN 321 (415)
Q Consensus 246 ~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~ 321 (415)
.++. |+|+||+++++ ++++.+... ...+++.+++++.++.++|+...+ ++..++++++++++.+
T Consensus 272 ~l~~-G~~~G~v~~~~--------~~~~~l~~~~~~~~~~t~~~~~~~~aa~~a~l~~~~~---~~~~~~~~~~~~~l~~ 339 (434)
T 2epj_A 272 IIGG-GFPVGAVAGSR--------EVMSLLTPQGKVFNAGTFNAHPITMAAGLATLKALEE---EPVYSVSREAAKALEE 339 (434)
T ss_dssp GGGT-TSSCEEEEECH--------HHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHHHHHH---SCHHHHHHHHHHHHHH
T ss_pred hhcC-CcceeeeeecH--------HHHHhhccCCCcccCCCCCcCHHHHHHHHHHHHHHHh---cCHHHHHHHHHHHHHH
Confidence 9876 89999999865 566655541 122456788888888888764211 3456777777777777
Q ss_pred HhhcCC---CCcCCCCCCCceEEEEecCccccCC--------CCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEeeCC
Q 014936 322 KIKEIP---CISCPHKPEGSMAVMLKLNLSLLDD--------IIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFAVD 390 (415)
Q Consensus 322 ~l~~~~---~~~~~~~p~~g~~~~~~l~~~~~~~--------~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~ 390 (415)
.|+++. ++... .+..|.++|+.++.....+ .....++...++ ++||.+.|+.. .++|+++..+
T Consensus 340 ~L~~~~~~~~~~~~-~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~~~----~~~~~~~~~t 413 (434)
T 2epj_A 340 AASEVLDRTGLPYT-INRVESMMQLFIGVEEVSNAAQARKADKKFYVKLHEEML-RRGVFIAPSNL----EAVFTGLPHQ 413 (434)
T ss_dssp HHHHHHHHHTCCEE-EEEETTEEEEEETCSCCSSHHHHTTSCHHHHHHHHHHHH-HTTEECCSSTT----SCEECCTTCS
T ss_pred HHHHHHhhCCCcEE-EEEeeeEEEEEEeCCCcccchhccccCHHHHHHHHHHHH-HCCeEEeccCC----CcEEEeccCC
Confidence 776541 23211 3456778898886411000 001345666654 67999998753 4577777789
Q ss_pred hhhHHHHHHHHHHHHHHH
Q 014936 391 PYSLEECLDRIKSFYQRH 408 (415)
Q Consensus 391 ~~~l~~~l~~l~~~~~~~ 408 (415)
++++++++++|+++++++
T Consensus 414 ~e~i~~~l~~l~~~l~~~ 431 (434)
T 2epj_A 414 GEALEIAVEGLRSSLKTV 431 (434)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 999999999999998765
No 172
>2e7u_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.90A {Thermus thermophilus}
Probab=99.97 E-value=5.8e-29 Score=237.60 Aligned_cols=332 Identities=14% Similarity=0.071 Sum_probs=223.3
Q ss_pred cCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHH
Q 014936 33 NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQA 112 (415)
Q Consensus 33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~a 112 (415)
+++.++||..|.+....++ .+|.+++++.+.+.......|+ .++++.+++++.+..+ .++++++++|++++
T Consensus 50 ~g~~~iD~~~~~~~~~lG~-~~p~v~~a~~~~~~~~~~~~~~-----~~~~~~l~~~l~~~~~---~~~~v~~~~~g~ea 120 (424)
T 2e7u_A 50 DGNRYLDYVMSWGPLILGH-AHPKVLARVRETLERGLTFGAP-----SPLEVALAKKVKRAYP---FVDLVRFVNSGTEA 120 (424)
T ss_dssp TCCEEEESSGGGTTCTTCB-TCHHHHHHHHHHHHTCSCCSSC-----CHHHHHHHHHHHHHCT---TCCEEEEESSHHHH
T ss_pred CCCEEEEccccccccccCC-CCHHHHHHHHHHHHhCCCCCCC-----CHHHHHHHHHHHHhCC---CCCEEEEeCCHHHH
Confidence 4677899998864322223 6899999999998764322332 3455566666655443 57899999999999
Q ss_pred HHHHHHH---hcCCCCEEEEcCCCCcchHHHHHh--------------CCC------eEEEeeccCCCCCCCChhHHHhh
Q 014936 113 IDVAMAL---LSRPGANILLPRPGFPIYELSAAF--------------RHI------EVRHFDLLPDKGWEVDLDDIESL 169 (415)
Q Consensus 113 l~~~~~~---l~~~gd~vi~~~p~y~~~~~~~~~--------------~g~------~~~~~~~~~~~~~~~~~~~l~~~ 169 (415)
+..+++. +.+ ++.|++.+|+|+++...+.. .|. ++..++. .|++.|++.
T Consensus 121 ~~~al~~ar~~~~-~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~-------~d~~~le~~ 192 (424)
T 2e7u_A 121 TMSALRLARGYTG-RPYIVKFRGNYHGHADGLLVEAGSGALTLGVPSSAGVPEEYAKLTLVLEY-------NDPEGLREV 192 (424)
T ss_dssp HHHHHHHHHHHHC-CCEEEEETTCCCCCCGGGSEECCSSSCCBCEESSTTCCHHHHTTEEEECT-------TCHHHHHHH
T ss_pred HHHHHHHHHHhhC-CCEEEEECCCcCCCcHHHHHhcCCcccccCCCCCCCCCCccCCceEeCCC-------CCHHHHHHH
Confidence 9999986 554 47899999999986553321 121 2333332 378999988
Q ss_pred cCC--CceEEEecCCCCc-cccCC-CHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCcc
Q 014936 170 ADQ--NTVALVIINPGNP-CGNVY-SYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSK 245 (415)
Q Consensus 170 ~~~--~~~~v~i~~p~np-tG~~~-~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK 245 (415)
++. ...++++++|+|+ ||.++ +.+.+++|.++ ++||+++|+||+|.++ ..+.. .....++...++ .|+||
T Consensus 193 l~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l-~~~g~~lI~DEv~~g~-~~g~~-~~~~~~~~~~di---~s~sK 266 (424)
T 2e7u_A 193 LKRRGEEIAAIIFEPVVGNAGVLVPTEDFLKALHEA-KAYGVLLIADEVMTGF-RLAFG-GATELLGLKPDL---VTLGK 266 (424)
T ss_dssp HHHHGGGEEEEEECSSBCTTSCBCCCHHHHHHHHHG-GGGTCEEEEECTTTTT-TSSTT-HHHHHHTCCCSE---EEECG
T ss_pred HHhCCCCEEEEEEeCCCCCCCCcCCCHHHHHHHHHH-HHcCCEEEEecCcccc-ccchh-HHHHHhCCCcch---hhhhh
Confidence 863 3456777788664 89765 79999999999 9999999999999976 33321 112222222222 38999
Q ss_pred ccCCCCceEEEEEeeCCCCCCChHHHHHHHHhh----ccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHH
Q 014936 246 RWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKY----FDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYN 321 (415)
Q Consensus 246 ~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~ 321 (415)
+++ +|+|+||+++++ ++++.+... ...+++.+++++.++.++|+... + .++..++++++++++.+
T Consensus 267 ~l~-~G~~~G~~~~~~--------~~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~-~-~~~~~~~~~~~~~~l~~ 335 (424)
T 2e7u_A 267 ILG-GGLPAAAYAGRR--------EIMEKVAPLGPVYQAGTLSGNPLAMAAGLATLELLE-E-NPGYYAYLEDLGARLEA 335 (424)
T ss_dssp GGG-TTSSCEEEEECH--------HHHTTBTTTSSBCCCCTTCSCHHHHHHHHHHHHHHH-H-CTHHHHHHHHHHHHHHH
T ss_pred hhh-CCcceEEEEEcH--------HHHhhhcccCCcccCCCCCCCHHHHHHHHHHHHHHH-h-ccHHHHHHHHHHHHHHH
Confidence 987 499999999865 566666541 12245678888888888886421 1 14566777777788777
Q ss_pred HhhcC---CCCcCCCCCCCceEEEEecCccccCC--------CCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEeeCC
Q 014936 322 KIKEI---PCISCPHKPEGSMAVMLKLNLSLLDD--------IIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFAVD 390 (415)
Q Consensus 322 ~l~~~---~~~~~~~~p~~g~~~~~~l~~~~~~~--------~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~ 390 (415)
.|+++ .++. ...+..|.++|+.++.....+ .....++...++ ++||.+.|+.. ..+|+++..+
T Consensus 336 ~L~~~~~~~~~~-~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~~~----~~~~~~~~~t 409 (424)
T 2e7u_A 336 GLKEVLKEKGLP-HTVNRVGSMITVFFTEGPVVTFQDARRTDTELFKRFFHGLL-DRGIYWPPSNF----EAAFLSVAHR 409 (424)
T ss_dssp HHHHHHHHTTCC-CEEEEETTEEEEESSSSCCCSHHHHTTSCHHHHHHHHHHHH-TTTEECCSSSS----SCEECCTTCC
T ss_pred HHHHHHHhCCCc-eEEEeeceEEEEEEeCCCCcchhhhcccCHHHHHHHHHHHH-HCCeEEeccCC----CceEeeccCC
Confidence 77653 1332 113456778999886311000 001345666665 67999998753 4578877789
Q ss_pred hhhHHHHHHHHHHH
Q 014936 391 PYSLEECLDRIKSF 404 (415)
Q Consensus 391 ~~~l~~~l~~l~~~ 404 (415)
++++++++++|+++
T Consensus 410 ~~~i~~~l~~l~~~ 423 (424)
T 2e7u_A 410 EEDVEKTLEALRKA 423 (424)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh
Confidence 99999999999875
No 173
>2fnu_A Aminotransferase; protein-product complex, structural genomics, montreal-kings bacterial structural genomics initiative, BSGI; HET: PMP UD1; 1.50A {Helicobacter pylori} SCOP: c.67.1.4 PDB: 2fni_A* 2fn6_A*
Probab=99.97 E-value=5.9e-28 Score=226.88 Aligned_cols=314 Identities=14% Similarity=0.076 Sum_probs=225.1
Q ss_pred CCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHh---cCCCCEE
Q 014936 51 FHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALL---SRPGANI 127 (415)
Q Consensus 51 ~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l---~~~gd~v 127 (415)
.++++.+++++.+.+.... |.+.....++|+.++++++ . +++++++|+++++..++.++ .++||+|
T Consensus 9 ~~~~~~v~~a~~~~~~~~~---~~~~~~~~~l~~~la~~~~------~--~~v~~~~ggt~al~~~~~~~~~~~~~gd~V 77 (375)
T 2fnu_A 9 PCLDKEDKKAVLEVLNSKQ---LTQGKRSLLFEEALCEFLG------V--KHALVFNSATSALLTLYRNFSEFSADRNEI 77 (375)
T ss_dssp CCCCHHHHHHHHHHHTSSC---CSSSHHHHHHHHHHHHHHT------C--SEEEEESCHHHHHHHHHHHSSCCCTTSCEE
T ss_pred CCCCHHHHHHHHHHHHcCc---ccCChHHHHHHHHHHHHhC------C--CeEEEeCCHHHHHHHHHHHhcccCCCCCEE
Confidence 3457899999999887532 2333467899999999983 2 39999999999999999999 8899999
Q ss_pred EEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCc
Q 014936 128 LLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKT 207 (415)
Q Consensus 128 i~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~ 207 (415)
+++.|+|+++...+...|++++.++++++. .+|++++++.++++++++++++| ||.+.+ +++|.++|+++|+
T Consensus 78 l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~--~~d~~~l~~~i~~~~~~v~~~~~---tG~~~~---l~~i~~l~~~~~~ 149 (375)
T 2fnu_A 78 ITTPISFVATANMLLESGYTPVFAGIKNDG--NIDELALEKLINERTKAIVSVDY---AGKSVE---VESVQKLCKKHSL 149 (375)
T ss_dssp EECSSSCTHHHHHHHHTTCEEEECCBCTTS--SBCGGGSGGGCCTTEEEEEEECG---GGCCCC---HHHHHHHHHHHTC
T ss_pred EECCCccHhHHHHHHHCCCEEEEeccCCCC--CCCHHHHHhhcCcCceEEEEeCC---cCCccC---HHHHHHHHHHcCC
Confidence 999999999999999999999999886532 68999999999888888888876 999865 6788888999999
Q ss_pred EEEEccccCCcccCCCCcccccccCCCCCeEEEccCc--cccCCCCceEEEEEeeCCCCCCChHHHHHHHHhhcccc---
Q 014936 208 LVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLS--KRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDIL--- 282 (415)
Q Consensus 208 ~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~s--K~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 282 (415)
++|+|++|+.+..... ..+..++ .+.+.|+| |.++. | +|++++.+ ++++.+.++......
T Consensus 150 ~li~D~a~~~~~~~~~--~~~~~~~----~i~~~s~s~~K~~~~-g--~g~~~~~~------~~~~~~~~~~~~~~~~~~ 214 (375)
T 2fnu_A 150 SFLSDSSHALGSEYQN--KKVGGFA----LASVFSFHAIKPITT-A--EGGAVVTN------DSELHEKMKLFRSHGMLK 214 (375)
T ss_dssp EEEEECTTCTTCEETT--EETTSSS----SEEEEECCTTSSSCC-S--SCEEEEES------CHHHHHHHHHHTBTTEEE
T ss_pred EEEEECccccCCeECC--eeccccC----CeEEEeCCCCCCccc-c--CceEEEeC------CHHHHHHHHHHHhcCCcc
Confidence 9999999987543211 1122221 26777888 99755 6 78888742 125666665542111
Q ss_pred --------------CCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCC-----CCceEEEE
Q 014936 283 --------------GDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKP-----EGSMAVML 343 (415)
Q Consensus 283 --------------~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p-----~~g~~~~~ 343 (415)
...+++...+....+ +++++..++.+++++++.+.|+++|++... .+ ..++++|+
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~a~~~~~~-----~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-~~~~~~~~~~~~~~~ 288 (375)
T 2fnu_A 215 KDFFEGEVKSIGHNFRLNEIQSALGLSQL-----KKAPFLMQKREEAALTYDRIFKDNPYFTPL-HPLLKDKSSNHLYPI 288 (375)
T ss_dssp SSSSCEEESSCCCBCCCCHHHHHHHHHHH-----TTHHHHHHHHHHHHHHHHHHHTTCSSEEES-GGGCSSCCCCSCEEE
T ss_pred ccccccccccccccCCCCHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHhhcCCCcccc-CCCCCCCcceEEEEE
Confidence 123333333322223 346778888999999999999998887733 33 12345577
Q ss_pred ecCccccCCCCCHHHHHHHHHhhcCeEEEcCCC-------CC-------C-------CCeEEEEee--CChhhHHHHHHH
Q 014936 344 KLNLSLLDDIIDDIDFCFKLAKEESVIILPGTA-------VG-------L-------KNWLRVTFA--VDPYSLEECLDR 400 (415)
Q Consensus 344 ~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~-------~~-------~-------~~~iRi~~~--~~~~~l~~~l~~ 400 (415)
.++... ..+..++...| .++||.+..+.. |+ . .+++||+++ .++++++.+++.
T Consensus 289 ~~~~~~---~~~~~~l~~~L-~~~gi~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~lRi~~~~~~t~~~i~~~~~~ 364 (375)
T 2fnu_A 289 LMHQKF---FTCKKLILESL-HKRGILAQVHYKPIYQYQLYQQLFNTAPLKSAEDFYHAEISLPCHANLNLESVQNIAHS 364 (375)
T ss_dssp EECGGG---GGGHHHHHHHH-HHTTEECBCCCCCGGGSHHHHHHHCCCCCHHHHHHHHHEEEECCCTTCCHHHHHHHHHH
T ss_pred EeCccc---cchHHHHHHHH-HHCCCCccccccccccchhhhcCCCccCChHHHHHHhCEEEecCCCCCCHHHHHHHHHH
Confidence 675310 00345566665 567999883211 11 1 267999996 589999999999
Q ss_pred HHHHHHHH
Q 014936 401 IKSFYQRH 408 (415)
Q Consensus 401 l~~~~~~~ 408 (415)
|+++++++
T Consensus 365 l~~~~~~~ 372 (375)
T 2fnu_A 365 VLKTFESF 372 (375)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHh
Confidence 99988754
No 174
>2dgk_A GAD-beta, GADB, glutamate decarboxylase beta; gadbd1-14, autoinhibition, substituted aldamine, lyase; HET: PLP; 1.90A {Escherichia coli} PDB: 2dgm_A* 1pmo_A* 2dgl_A* 1pmm_A* 3fz6_A* 3fz7_A 3fz8_A* 1xey_A*
Probab=99.97 E-value=6.2e-28 Score=232.25 Aligned_cols=337 Identities=14% Similarity=0.007 Sum_probs=235.9
Q ss_pred CCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCC---CcEEEeCChHHHHHHHHHHhcC------
Q 014936 52 HTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTP---NDVFVTSGCTQAIDVAMALLSR------ 122 (415)
Q Consensus 52 ~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~---~~i~i~~g~~~al~~~~~~l~~------ 122 (415)
+.++.+.+++.+++.... ..|....+..++++.+.+++.+.+|.+.+. ..+++|+|+++++.+++.++.+
T Consensus 53 ~~~~~v~e~~~~a~~~~~-~~~~~~~~~~~l~~~~~~~la~l~g~~~~~~~~~~~~~t~ggtea~~~al~a~~~~~~~~~ 131 (452)
T 2dgk_A 53 WDDENVHKLMDLSINKNW-IDKEEYPQSAAIDLRCVNMVADLWHAPAPKNGQAVGTNTIGSSEACMLGGMAMKWRWRKRM 131 (452)
T ss_dssp CCCHHHHHHHHHTTTCBT-TCTTTCHHHHHHHHHHHHHHHHHTTCCCCTTSCCEEEEESSHHHHHHHHHHHHHHHHHHHH
T ss_pred CchHHHHHHHHHHhccCC-CChhhChhHHHHHHHHHHHHHHHhCCCcccccCCceEEeCCHHHHHHHHHHHHHHHHHHHH
Confidence 456889999988876532 345555577888999988888887754332 2489999999999999988753
Q ss_pred --CC-----CEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHH
Q 014936 123 --PG-----ANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHL 195 (415)
Q Consensus 123 --~g-----d~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l 195 (415)
+| ++|+++. +|..+...++..|++++.+++++ +++.+|+++|++++++++++|++++|+||||.+ +++
T Consensus 132 ~~~G~~~~~~~vi~~~-~h~~~~~~~~~~G~~v~~v~~~~-~~~~~d~~~l~~~i~~~t~~v~~~~~~n~tG~~---~~l 206 (452)
T 2dgk_A 132 EAAGKPTDKPNLVCGP-VQICWHKFARYWDVELREIPMRP-GQLFMDPKRMIEACDENTIGVVPTFGVTYTGNY---EFP 206 (452)
T ss_dssp HHTTCCCSCCEEEESS-CCHHHHHHHHHTTCEEEECCCBT-TBCSCCHHHHHHHCCTTEEEEECBBSCTTTCBB---CCH
T ss_pred HhcCCCCCCcEEEECC-CcHHHHHHHHHcCceEEEEecCC-CCCeECHHHHHHHHhhCCEEEEEEcCCcCCccc---CCH
Confidence 45 5999999 99999999999999999998864 357899999999999899999999999999999 567
Q ss_pred HHHHHHHhhc------CcEEEEccccCCccc---CCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCC
Q 014936 196 QKLAETANKL------KTLVIADEVYGHLVF---GDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMF 266 (415)
Q Consensus 196 ~~i~~~~~~~------~~~li~De~~~~~~~---~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~ 266 (415)
++|+++|+++ |+++++|++|+.+.. .+.....+ ....-..+..+++|. +++|+++||++++++..+
T Consensus 207 ~~I~~ia~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~---~~~~~d~~~~~~hK~-~~~~~~~G~~~~~~~~~~- 281 (452)
T 2dgk_A 207 QPLHDALDKFQADTGIDIDMHIDAASGGFLAPFVAPDIVWDF---RLPRVKSISASGHKF-GLAPLGCGWVIWRDEEAL- 281 (452)
T ss_dssp HHHHHHHHHHHHHHCCCCCEEEECTTGGGTHHHHCTTCCCST---TSTTEEEEEEETTTT-TCCCSSCEEEEESSGGGS-
T ss_pred HHHHHHHHHHhhccCCCCcEEEEcccHHHHHHhhCccchhhc---CCCCCcEEEECcccc-cCCCCCeEEEEEcCHHHH-
Confidence 7888888885 999999999998653 22111111 111112566788995 788999999999753211
Q ss_pred ChHHHHHHHHhhc-c---------ccC---CchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCC
Q 014936 267 RKPKVVERMKKYF-D---------ILG---DPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPH 333 (415)
Q Consensus 267 ~~~~~~~~~~~~~-~---------~~~---~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~ 333 (415)
.+.+.... . ..+ ......+.++...+. .+.+++..++..++++++.+.|+++++++++
T Consensus 282 -----~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~aal~~lg---~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~- 352 (452)
T 2dgk_A 282 -----PQELVFNVDYLGGQIGTFAINFSRPAGQVIAQYYEFLRLG---REGYTKVQNASYQVAAYLADEIAKLGPYEFI- 352 (452)
T ss_dssp -----CGGGCEEECCTTCCEEECCSCCSCBCHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHTTSSEEEE-
T ss_pred -----HHHhccCccccCCCCCCcccCCCChhHHHHHHHHHHHHHh---HHHHHHHHHHHHHHHHHHHHHHHhCCCeEEe-
Confidence 11111100 0 001 113444555554443 3668888999999999999999999778743
Q ss_pred CC----CCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCC---CCCCCeEEEEee--CChhhHHHHHHHHHHH
Q 014936 334 KP----EGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTA---VGLKNWLRVTFA--VDPYSLEECLDRIKSF 404 (415)
Q Consensus 334 ~p----~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~---~~~~~~iRi~~~--~~~~~l~~~l~~l~~~ 404 (415)
.| ....++.++++...... .+..++...| .+.||.+..... ....+++|++++ .++++++.+++.|+++
T Consensus 353 ~~~~~~~~~~~v~f~~~~~~~~~-~~~~~l~~~L-~~~Gi~v~~~~~~~~~~~~~~lRis~~~~~t~e~id~li~~l~~~ 430 (452)
T 2dgk_A 353 CTGRPDEGIPAVCFKLKDGEDPG-YTLYDLSERL-RLRGWQVPAFTLGGEATDIVVMRIMCRRGFEMDFAELLLEDYKAS 430 (452)
T ss_dssp EECCTTTBSSEEEEEECTTCCCS-CCHHHHHHHH-HHTTCBCCEEECSTTCTTCEEEEEECCTTCCHHHHHHHHHHHHHH
T ss_pred cCCCCCCCeEEEEEEecCccccc-CCHHHHHHHH-HhcCCeeeeeeCCcccCCeEEEEEEecCCCCHHHHHHHHHHHHHH
Confidence 33 34456666665310000 1235666666 456986432211 112458999995 5689999999999998
Q ss_pred HHHHHH
Q 014936 405 YQRHAK 410 (415)
Q Consensus 405 ~~~~~~ 410 (415)
++.+.+
T Consensus 431 ~~~~~~ 436 (452)
T 2dgk_A 431 LKYLSD 436 (452)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 877654
No 175
>3fq8_A Glutamate-1-semialdehyde 2,1-aminomutase; drug resistance, microev0lution, integrated approach, chlorophyll biosynthesis; HET: PMP; 2.00A {Synechococcus elongatus pcc 6301} SCOP: c.67.1.4 PDB: 2hp1_A* 2hoz_A* 2hoy_A* 2hp2_A* 3fq7_A* 3usf_A* 2gsa_A* 3gsb_A* 4gsa_A* 3fqa_A* 2cfb_A*
Probab=99.96 E-value=4.2e-29 Score=238.84 Aligned_cols=334 Identities=13% Similarity=0.053 Sum_probs=215.9
Q ss_pred cCcceeEecccCCCCCCCCC-CcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHH
Q 014936 33 NEKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQ 111 (415)
Q Consensus 33 ~~~~~i~l~~g~~~~~~~~~-~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~ 111 (415)
+++.++||+.|.+... ++ .+|.+++++.+.+.......| + .++++++++++.+..+ .++++++++|+++
T Consensus 50 ~g~~~lD~~~~~~~~~--lG~~~p~v~~a~~~~~~~~~~~~~-~----~~~~~~la~~l~~~~~---~~~~v~~~~ggse 119 (427)
T 3fq8_A 50 DGNRYIDYVGTWGPAI--CGHAHPEVIEALKVAMEKGTSFGA-P----CALENVLAEMVNDAVP---SIEMVRFVNSGTE 119 (427)
T ss_dssp TSCEEEESSGGGTTCT--TCBTCHHHHHHHHHHHTTCSCCSS-C----CHHHHHHHHHHHHHST---TCSEEEEESSHHH
T ss_pred CCCEEEECCCchhhhc--cCCCCHHHHHHHHHHHHhCCCcCC-C----CHHHHHHHHHHHHhCC---CCCEEEEeCCHHH
Confidence 4778999999864322 33 589999999999876443333 2 3556666666665554 5789999999999
Q ss_pred HHHHHHHHhc--CCCCEEEEcCCCCcchHHHHHhC-CCe-------------------EEEeeccCCCCCCCChhHHHhh
Q 014936 112 AIDVAMALLS--RPGANILLPRPGFPIYELSAAFR-HIE-------------------VRHFDLLPDKGWEVDLDDIESL 169 (415)
Q Consensus 112 al~~~~~~l~--~~gd~vi~~~p~y~~~~~~~~~~-g~~-------------------~~~~~~~~~~~~~~~~~~l~~~ 169 (415)
+++.+++... ..++.|++..|+|+++...+... +.. +..++. -|+++|+++
T Consensus 120 a~~~al~~a~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~le~~ 192 (427)
T 3fq8_A 120 ACMAVLRIMRAYTGRDKIIKFEGCYHGHADMFLVKAGSGVATLGLPSSPGVPKKTTANTLTTPY-------NDLEAVKAL 192 (427)
T ss_dssp HHHHHHHHHHHHHCCCEEEEEETCCCCSCGGGCSSCCTHHHHHTCCSCSSSCHHHHTTEEEEET-------TCHHHHHHH
T ss_pred HHHHHHHHHHHhhCCCEEEEECCCcCCCCHHHHHhcCCcccccCCCCCCCCCCcccCceeecCC-------CCHHHHHHH
Confidence 9999995432 23478999999998755433222 111 222221 178999988
Q ss_pred cCC---CceEEEecCCCCccccCCC-HHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCcc
Q 014936 170 ADQ---NTVALVIINPGNPCGNVYS-YQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSK 245 (415)
Q Consensus 170 ~~~---~~~~v~i~~p~nptG~~~~-~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK 245 (415)
+++ +++++++..++|++|.+.+ .+.+++|.++|++||+++|+||+|.++ ..+.. ......+...+ +.|+||
T Consensus 193 l~~~~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~g~-~~g~~-~~~~~~~~~~d---i~t~sK 267 (427)
T 3fq8_A 193 FAENPGEIAGVILEPIVGNSGFIVPDAGFLEGLREITLEHDALLVFDEVITGF-RIAYG-GVQEKFGVTPD---LTTLGK 267 (427)
T ss_dssp HHHSTTTEEEEEECSSBCTTSCBCCCTTHHHHHHHHHHHTTCEEEEECTTTBT-TTBTT-HHHHHTTCCCS---EEEECG
T ss_pred HHhCCCCEEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccccc-ccCcc-hhhHhcCCCCC---hhhhhh
Confidence 865 4444445444667787654 666999999999999999999999987 44432 11122222212 358899
Q ss_pred ccCCCCceEEEEEeeCCCCCCChHHHHHHHHhh----ccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHH
Q 014936 246 RWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKY----FDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYN 321 (415)
Q Consensus 246 ~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~ 321 (415)
+++ +|+|+||+++++ ++++.+... ...+++.+++++.++.++|+...+ +...++++++++.+.+
T Consensus 268 ~~~-~G~~~G~~~~~~--------~~~~~~~~~~~~~~~~t~~~~~~~~aa~~aal~~~~~---~~~~~~~~~~~~~~~~ 335 (427)
T 3fq8_A 268 IIG-GGLPVGAYGGKR--------EIMQLVAPAGPMYQAGTLSGNPLAMTAGIKTLELLRQ---PGTYEYLDQITKRLSD 335 (427)
T ss_dssp GGG-TTSSCEEEEECH--------HHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHHHHTS---TTHHHHHHHHHHHHHH
T ss_pred hhh-CCcceEEEEEcH--------HHHHhhccCCCccccCCCCcCHHHHHHHHHHHHHHHh---cCHHHHHHHHHHHHHH
Confidence 987 799999998864 576666542 122356688899888888753211 2233444444444444
Q ss_pred Hhh----cCCCCcCCCCCCCceEEEEecCccccC--------CCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEeeC
Q 014936 322 KIK----EIPCISCPHKPEGSMAVMLKLNLSLLD--------DIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFAV 389 (415)
Q Consensus 322 ~l~----~~~~~~~~~~p~~g~~~~~~l~~~~~~--------~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~ 389 (415)
.|+ .+ ++. ...+..|+++|+.+...... +.....++...+ .++||.+.|+.. ..+|+++..
T Consensus 336 ~l~~~~~~~-~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l-~~~Gi~v~~~~~----~r~~~~~~~ 408 (427)
T 3fq8_A 336 GLLAIAQET-GHA-ACGGQVSGMFGFFFTEGPVHNYEDAKKSDLQKFSRFHRGM-LEQGIYLAPSQF----EAGFTSLAH 408 (427)
T ss_dssp HHHHHHHHT-TCC-CEEEEETTEEEEESSSCCCCSHHHHTTSCHHHHHHHHHHH-HHTTEECCSSTT----SCEECCTTC
T ss_pred HHHHHHHhC-CCC-eEEEEeeeEEEEEEecCccccccccccccHHHHHHHHHHH-HHCCcEEecCCC----CCEEeeCcC
Confidence 444 33 222 11345677888887542110 000123555555 567999998763 356666678
Q ss_pred ChhhHHHHHHHHHHHHHH
Q 014936 390 DPYSLEECLDRIKSFYQR 407 (415)
Q Consensus 390 ~~~~l~~~l~~l~~~~~~ 407 (415)
+++++++++++|++++++
T Consensus 409 t~e~i~~~l~~l~~~l~~ 426 (427)
T 3fq8_A 409 TEEDIDATLAAARTVMSA 426 (427)
T ss_dssp CHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHh
Confidence 999999999999998864
No 176
>1rv3_A Serine hydroxymethyltransferase, cytosolic; one-carbon metabolism; HET: GLY PLP; 2.40A {Oryctolagus cuniculus} SCOP: c.67.1.4 PDB: 1rv4_A* 1rvu_A* 1rvy_A* 1ls3_A* 1cj0_A* 1bj4_A* 1eji_A*
Probab=99.96 E-value=8.9e-29 Score=239.43 Aligned_cols=346 Identities=14% Similarity=0.061 Sum_probs=234.8
Q ss_pred cceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCC------CCCCCcHHHHHHHHHHHhhhCCCCCCC--CcEEEe
Q 014936 35 KKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGY------APTAGLPLTRRAIAEYLSRDLPYKLTP--NDVFVT 106 (415)
Q Consensus 35 ~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y------~~~~g~~~lr~~ia~~~~~~~~~~~~~--~~i~i~ 106 (415)
.+.|+|..+. .++++.+++++.+.+.+....+| +...+..++++.+.+++++.+|...+. .+|+++
T Consensus 44 ~~~i~L~a~e------~~~~~~V~eA~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~a~~~g~~~~~~~~~V~~~ 117 (483)
T 1rv3_A 44 RVGLELIASE------NFASRAVLEALGSCLNNKYSLGYPGQRYYGGTEHIDELETLCQKRALQAYGLDPQCWGVNVQPY 117 (483)
T ss_dssp HSSEECCTTC------CCCCHHHHHHHTSGGGTCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHTTCCTTTEEEECCCS
T ss_pred hcCeEEEcCC------CCCCHHHHHHHHHHHhccCcccCCCccccCcchhHHHHHHHHHHHHHHHhCCCcccCceEEEEC
Confidence 4578997665 34679999999888764321122 222345678877777777777744221 247777
Q ss_pred CChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHH--------HHhCC--CeEEEeeccCCCCCCCChhHHHhhcC-CCce
Q 014936 107 SGCTQAIDVAMALLSRPGANILLPRPGFPIYELS--------AAFRH--IEVRHFDLLPDKGWEVDLDDIESLAD-QNTV 175 (415)
Q Consensus 107 ~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~--------~~~~g--~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~ 175 (415)
+|+ +++.+++.++++|||+|++++++|.++... +...| ..++.+++++ .++.+|+++|+++++ ++++
T Consensus 118 sGs-~an~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~G~~~~~v~~~~~~-~~~~iD~d~le~~i~~~~tk 195 (483)
T 1rv3_A 118 SGS-PANFAVYTALVEPHGRIMGLDLPDGGHLTHGFMTDKKKISATSIFFESMAYKVNP-DTGYIDYDRLEENARLFHPK 195 (483)
T ss_dssp SHH-HHHHHHHHHHTCTTCEEEEECGGGTCCGGGCCBCSSCBCSHHHHHSEEEEECBCT-TTCSBCHHHHHHHHHHHCCS
T ss_pred CcH-HHHHHHHHHhcCCCCEEEEecCccCcCcchhhhhcccCcccccceEEEEECcccc-CCCcCCHHHHHHHHhhcCCc
Confidence 777 888888999999999999999999876532 22333 3444444443 357799999999997 7889
Q ss_pred EEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCc-ccCCCCcccccccCCCCCeEEEccCccccCCCCceE
Q 014936 176 ALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHL-VFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRL 254 (415)
Q Consensus 176 ~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~-~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~ 254 (415)
+|++ +++|++ .+++ +++|.++|+++|+++|+|++|... ...+....++. . ..+++.|+||++ .|+|.
T Consensus 196 lIi~-~~sn~~-~~~d---l~~i~~ia~~~g~~livD~ah~~g~~~~~~~~~p~~--~---~div~~s~~K~l--~Gprg 263 (483)
T 1rv3_A 196 LIIA-GTSCYS-RNLD---YGRLRKIADENGAYLMADMAHISGLVVAGVVPSPFE--H---CHVVTTTTHKTL--RGCRA 263 (483)
T ss_dssp EEEE-CCSSCC-SCCC---HHHHHHHHHHTTCEEEEECTTTHHHHHHTSSCCGGG--T---CSEEEEESSGGG--CCCSC
T ss_pred EEEE-eCCcCC-CcCC---HHHHHHHHHHcCCEEEEEccchhcccccCCCCCCCC--C---CcEEEecCcccC--CCCCc
Confidence 9888 899988 7655 788888999999999999998743 23333222322 1 127889999985 68888
Q ss_pred EEEEeeCCCCCCC-------hHHHHHHHHhhc--cccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhc
Q 014936 255 GWFVTTDPCGMFR-------KPKVVERMKKYF--DILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKE 325 (415)
Q Consensus 255 G~~~~~~~~~~~~-------~~~~~~~~~~~~--~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 325 (415)
||+++++...... ..++.+.+.... ...++++.....++..+++.....++++..+++.++++.+.+.|++
T Consensus 264 G~i~~~~~~~~~~~~~g~~~~y~~~~~~~~~~~~~~~g~~~~~~iaal~~Al~~~~~~~~~~~~~~~~~~~~~l~~~L~~ 343 (483)
T 1rv3_A 264 GMIFYRRGVRSVDPKTGKEILYNLESLINSAVFPGLQGGPHNHAIAGVAVALKQAMTPEFKEYQRQVVANCRALSAALVE 343 (483)
T ss_dssp EEEEEECSBCC-------CCBCCHHHHHHHHHTTTTCCSCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred eEEEEcchhhhhccccCcchhhHHHHHhhhhcCCcccCCccHHHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHh
Confidence 9999986421000 001333343321 1123445555555555554322356788899999999999999998
Q ss_pred CCCCcCCCCCC-CceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEE----cCCCCC-CCCeEEEEee--CC----hhh
Q 014936 326 IPCISCPHKPE-GSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIIL----PGTAVG-LKNWLRVTFA--VD----PYS 393 (415)
Q Consensus 326 ~~~~~~~~~p~-~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~----~g~~~~-~~~~iRi~~~--~~----~~~ 393 (415)
+ ++.++ .+. ...++|+.+... +. +..++ ..+|.+.||.+. ||..+. .++++||+++ ++ +++
T Consensus 344 ~-g~~~~-~~~~~~~~~~v~~~~~---g~-~~~~~-~~~L~~~gI~v~~~~~pg~~~~~~~~~iRis~~~~~t~g~~~ed 416 (483)
T 1rv3_A 344 L-GYKIV-TGGSDNHLILVDLRSK---GT-DGGRA-EKVLEACSIACNKNTCPGDKSALRPSGLRLGTPALTSRGLLEKD 416 (483)
T ss_dssp T-TCEEG-GGSCSSSEEEEEGGGG---TC-CHHHH-HHHHHHTTEECEEECCSSCSCTTSCCEEEEECHHHHHTTCCHHH
T ss_pred c-CCEec-cCCCCCceEEEeccCC---CC-CHHHH-HHHHHhCCcEEecCCCCCCCcCCCCceEEeecCCcccCCCCHHH
Confidence 8 78743 443 346778877532 11 44554 455678899999 887432 2579999995 35 899
Q ss_pred HHHHHHHHHHHHHH
Q 014936 394 LEECLDRIKSFYQR 407 (415)
Q Consensus 394 l~~~l~~l~~~~~~ 407 (415)
++++++.|.++++.
T Consensus 417 i~~~~~~l~~~l~~ 430 (483)
T 1rv3_A 417 FQKVAHFIHRGIEL 430 (483)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh
Confidence 99999999998875
No 177
>2oqx_A Tryptophanase; lyase, pyridoxal phosphate, tryptophan catabolism; HET: CME EPE; 1.90A {Escherichia coli} SCOP: c.67.1.2 PDB: 2c44_A 2v1p_A* 2v0y_A*
Probab=99.96 E-value=2.2e-29 Score=243.65 Aligned_cols=329 Identities=15% Similarity=0.132 Sum_probs=215.3
Q ss_pred HHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCC-----C----C
Q 014936 55 HVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRP-----G----A 125 (415)
Q Consensus 55 ~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~-----g----d 125 (415)
+.+++++.+.+..+. ..|++..+..++|+++++++ ..+++++|+|+++|+.+++.++.++ | |
T Consensus 53 ~~v~~a~~~~l~~~~-~~y~~~~~~~~l~~~la~~~--------~~~~v~~t~~gt~A~~~al~~~~~~~~~~~G~~~~d 123 (467)
T 2oqx_A 53 GAVTQSMQAAMMRGD-EAYSGSRSYYALAESVKNIF--------GYQYTIPTHQGRGAEQIYIPVLIKKREQEKGLDRSK 123 (467)
T ss_dssp SCCCHHHHHHTTSCC-CCSSSCHHHHHHHHHHHHHH--------CCSEEEEEC--CCSHHHHHHHHHHHHHHHHCCCTTT
T ss_pred HHHHHHHHHHhccCc-ceeccCchhHHHHHHHHHHh--------CcCcEEEcCCcHHHHHHHHHHHhccccccCCCCccc
Confidence 677788888776543 36877778899999999998 3479999999999999999999888 8 9
Q ss_pred EEEEcCCCCcchHHHHHhCCCeEEEeec----cCC----CCCCCChhHHHhhcC----CCceEEEecCCCCcc-ccCCCH
Q 014936 126 NILLPRPGFPIYELSAAFRHIEVRHFDL----LPD----KGWEVDLDDIESLAD----QNTVALVIINPGNPC-GNVYSY 192 (415)
Q Consensus 126 ~vi~~~p~y~~~~~~~~~~g~~~~~~~~----~~~----~~~~~~~~~l~~~~~----~~~~~v~i~~p~npt-G~~~~~ 192 (415)
+|++..+.|..+.......|..+..... +.. .++.+|+++|+++++ +++++|++++|+||+ |.+++.
T Consensus 124 ~Ii~~~~h~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~Le~~i~~~~~~~~~~vi~~~~~n~~gG~~~~~ 203 (467)
T 2oqx_A 124 MVAFSNYFFDTTQGHSQINGCTVRNVYIKEAFDTGVRYDFKGNFDLEGLERGIEEVGPNNVPYIVATITSNSAGGQPVSL 203 (467)
T ss_dssp CEEEESSCCHHHHHHHHHTTCEEEECBCTTTTCTTSCCTTTTCBCHHHHHHHHHHHCGGGCCCEEEESSBCGGGCBCCCH
T ss_pred eEEecccccccchhhhhccCcceeeccccccccCCCCCCccCCcCHHHHHHHHHhcCCCceeEEEEeccccCCCCccCCH
Confidence 9888743334444455556666544321 111 234679999999987 368899999999998 899999
Q ss_pred HHHHHHHHHHhhcCcEEEEccccCC-c---------ccCCCCcccccc--cCCCCCeEEEccCccccCCC-CceEEEEEe
Q 014936 193 QHLQKLAETANKLKTLVIADEVYGH-L---------VFGDKPFVPMGV--FGSTVPILTLGSLSKRWIVP-GWRLGWFVT 259 (415)
Q Consensus 193 ~~l~~i~~~~~~~~~~li~De~~~~-~---------~~~~~~~~~~~~--~~~~~~~i~~~s~sK~~~~~-G~r~G~~~~ 259 (415)
+++++|+++|++||+++|+|+++.. . .+.+.....+.. ....+ +++.|+||.++++ | ||+++
T Consensus 204 ~~l~~i~~la~~~gi~li~D~a~~~e~~~~~~~~~~~~~g~~~~~~~~~~~~~~d--~~~~s~sK~~g~~~G---g~~~~ 278 (467)
T 2oqx_A 204 ANLKAMYSIAKKYDIPVVMDSARFAENAYFIKQREAEYKDWTIEQITRETYKYAD--MLAMSAKKDAMVPMG---GLLCM 278 (467)
T ss_dssp HHHHHHHHHHHHTTCCEEEECTTHHHHHHHHHHHCGGGTTSCHHHHHHHHGGGCS--EEEEESSSTTCCSSC---EEEEE
T ss_pred HHHHHHHHHHHHcCCEEEEEchhhhhhhhhcccccccccCccHHHHhhhhhccCC--eEEEecccccCCCCc---eEEEe
Confidence 9999999999999999999977654 1 223322212110 01112 4578999998776 5 78777
Q ss_pred eCCCCCCChHHHHHHHHhhc--c----ccCCchhHHHHHHHHhhCCCcHHHH-HHHHHHHHHHHHHHHHHhhcCCCCcCC
Q 014936 260 TDPCGMFRKPKVVERMKKYF--D----ILGDPATFIQAAVPSILQQPDEVFF-KKTLNLLKQSVDICYNKIKEIPCISCP 332 (415)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~--~----~~~~~~~~~~~a~~~~l~~~~~~~~-~~~~~~~~~~~~~l~~~l~~~~~~~~~ 332 (415)
+++. +. +....++... . .....+.....++...++. ++ ++..++..++++++.+.|+++ ++. +
T Consensus 279 ~~~~-~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~l~~----~~~~~~~~~~~~~~~~l~~~L~~~-~~~-~ 348 (467)
T 2oqx_A 279 KDDS-FF---DVYTECRTLCVVQEGFPTYGGLEGGAMERLAVGLYD----GMNLDWLAYRIAQVQYLVDGLEEI-GVV-C 348 (467)
T ss_dssp CSGG-GH---HHHHHHHHHHHHTTSSCCCCCCCHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHHHHHHHT-TCC-E
T ss_pred cChh-HH---HHHHHHHHhhhccCCcccccchhhhHHHHHHHhhHh----hhhHHHHHHHHHHHHHHHHHHHHC-CCe-e
Confidence 6520 00 1333343321 1 0112222222233232221 11 123445567788888999887 777 4
Q ss_pred CCCCCceEEEEecCc--cccCCCCC-HHHHHHHHHhhcCeEEEcCCCC--C-----------CCCeEEEEee---CChhh
Q 014936 333 HKPEGSMAVMLKLNL--SLLDDIID-DIDFCFKLAKEESVIILPGTAV--G-----------LKNWLRVTFA---VDPYS 393 (415)
Q Consensus 333 ~~p~~g~~~~~~l~~--~~~~~~~~-~~~~~~~ll~~~gi~v~~g~~~--~-----------~~~~iRi~~~---~~~~~ 393 (415)
. |.+++++|+.++. .......- ...+...++.++||.+.|+..| + ..+++|++++ +++++
T Consensus 349 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gv~~~~~~~~~~~~~~~~g~~~~~~~~~iRl~~~~~~~t~e~ 427 (467)
T 2oqx_A 349 Q-QAGGHAAFVDAGKLLPHIPADQFPAQALACELYKVAGIRAVEIGSFLLGRDPKTGKQLPCPAELLRLTIPRATYTQTH 427 (467)
T ss_dssp E-EECSSCEEEEHHHHSTTSCGGGCHHHHHHHHHHHHHCEECEEESHHHHCBCTTTCSBCCCSCCEEEECCCTTTSCHHH
T ss_pred e-cCCceEEEEechhhcccCCcccccHHHHHHHHHHhcCceecccccccccccccccccccCccCeEEEEecCCCCCHHH
Confidence 4 7778889988742 11100000 3344666657789999985532 1 1379999996 78999
Q ss_pred HHHHHHHHHHHHHHH
Q 014936 394 LEECLDRIKSFYQRH 408 (415)
Q Consensus 394 l~~~l~~l~~~~~~~ 408 (415)
+++++++|++++++.
T Consensus 428 i~~~~~~l~~~l~~~ 442 (467)
T 2oqx_A 428 MDFIIEAFKHVKENA 442 (467)
T ss_dssp HHHHHHHHHHHHHSG
T ss_pred HHHHHHHHHHHHhhh
Confidence 999999999988753
No 178
>1cs1_A CGS, protein (cystathionine gamma-synthase); lyase, LLP-dependent enzymes, methionine biosynthesis; HET: LLP DHD; 1.50A {Escherichia coli} SCOP: c.67.1.3
Probab=99.96 E-value=1.4e-27 Score=225.10 Aligned_cols=288 Identities=16% Similarity=0.198 Sum_probs=206.1
Q ss_pred CCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHH----HHhCCCe
Q 014936 72 GYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELS----AAFRHIE 147 (415)
Q Consensus 72 ~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~----~~~~g~~ 147 (415)
.|++ .+..++++.++++++ .+ +.+++++| ++++..++.++.++||+|+++.|+|++.... ++..|.+
T Consensus 48 ~~~~-~~~~~l~~~la~~~~------~~-~~i~~~sG-t~a~~~~~~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~~g~~ 118 (386)
T 1cs1_A 48 RRGN-PTRDVVQRALAELEG------GA-GAVLTNTG-MSAIHLVTTVFLKPGDLLVAPHDCYGGSYRLFDSLAKRGCYR 118 (386)
T ss_dssp TTCC-HHHHHHHHHHHHHHT------CS-EEEEESSH-HHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHHHHHTTTSCE
T ss_pred CCCC-ccHHHHHHHHHHHhC------CC-cEEEeCCH-HHHHHHHHHHHhCCCCEEEEecCCcHhHHHHHHHHHHhcCCE
Confidence 4443 467899999999983 23 55666555 9999999999999999999999999975443 4677888
Q ss_pred EEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCccc
Q 014936 148 VRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVP 227 (415)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~ 227 (415)
+..++. .|++.+++.+++++++|++++|+||||.+++ +++|.++|+++|+++|+||+|..+.+.. +
T Consensus 119 ~~~~~~-------~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~De~~~~~~~~~----~ 184 (386)
T 1cs1_A 119 VLFVDQ-------GDEQALRAALAEKPKLVLVESPSNPLLRVVD---IAKICHLAREVGAVSVVDNTFLSPALQN----P 184 (386)
T ss_dssp EEEECT-------TCHHHHHHHHHTCCSEEEEECSCTTTCCCCC---HHHHHHHHHHTTCEEEEECTTTCTTTCC----G
T ss_pred EEEeCC-------CCHHHHHHhhccCCcEEEEeCCCCCCCcccC---HHHHHHHHHHcCCEEEEECCCcccccCC----c
Confidence 888865 2789999999888999999999999999975 7888889999999999999999866431 2
Q ss_pred ccccCCCCCeEEEccCccccCCCCceE-EEEEeeCCCCCCChHHHHHHHHhhcc-ccCCchhHHHHHHHHhhCCCcHHHH
Q 014936 228 MGVFGSTVPILTLGSLSKRWIVPGWRL-GWFVTTDPCGMFRKPKVVERMKKYFD-ILGDPATFIQAAVPSILQQPDEVFF 305 (415)
Q Consensus 228 ~~~~~~~~~~i~~~s~sK~~~~~G~r~-G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~ 305 (415)
+ .+ +..+++.|+||.++.+|.|+ ||+++++ +++++.+..... .+...++..+.++...++. +
T Consensus 185 ~-~~---~~di~~~s~sK~~~~~~~~~~G~~~~~~-------~~l~~~l~~~~~~~~~~~~~~~~~~~~~~l~~-----~ 248 (386)
T 1cs1_A 185 L-AL---GADLVLHSCTKYLNGHSDVVAGVVIAKD-------PDVVTELAWWANNIGVTGGAFDSYLLLRGLRT-----L 248 (386)
T ss_dssp G-GG---TCSEEEEETTTTTTCSSCCCCEEEEESS-------HHHHHHHHHHHHHHTCBCCHHHHHHHHHHHTT-----H
T ss_pred c-cc---CceEEEEcCcccccCCCCceeEEEEeCc-------HHHHHHHHHHHHhcCCCCCHHHHHHHHhcccH-----H
Confidence 2 22 24588999999999999987 9999864 246677765533 2345677777777666653 4
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCCCcCCCCC----------------CCceEEEEecCccccCCCCCHHHHHHHHHhhcCe
Q 014936 306 KKTLNLLKQSVDICYNKIKEIPCISCPHKP----------------EGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESV 369 (415)
Q Consensus 306 ~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p----------------~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi 369 (415)
....+.+.++++.+.+.|++++.+..+..| ..+.++.+.++. ... .+...+.+.||
T Consensus 249 ~~~~~~~~~~~~~l~~~l~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~-~~~~~l~~~gi 320 (386)
T 1cs1_A 249 VPRMELAQRNAQAIVKYLQTQPLVKKLYHPSLPENQGHEIAARQQKGFGAMLSFELDG-------DEQ-TLRRFLGGLSL 320 (386)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEESS-------CHH-HHHHHHHTCSS
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCeEEEECCCCCCCccHHHHHHhcCCCceEEEEEECC-------CHH-HHHHHHHhCCc
Confidence 556667777888888888776443211111 125566666642 223 34555677899
Q ss_pred EEEcCCCC-------------------------CC-CCeEEEEeeCChhhHHHHHHHHHHHHHHH
Q 014936 370 IILPGTAV-------------------------GL-KNWLRVTFAVDPYSLEECLDRIKSFYQRH 408 (415)
Q Consensus 370 ~v~~g~~~-------------------------~~-~~~iRi~~~~~~~~l~~~l~~l~~~~~~~ 408 (415)
.+.+.+.. +. ++++|++++. ++.++.+++|.+++++.
T Consensus 321 ~~~~~~~g~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iRis~~~--~~~~~~i~~l~~al~~~ 383 (386)
T 1cs1_A 321 FTLAESLGGVESLISHAATMTHAGMAPEARAAAGISETLLRISTGI--EDGEDLIADLENGFRAA 383 (386)
T ss_dssp SEEBSCCCSSSCEEEEGGGTTTTTSCHHHHHHHTCCTTEEEEECCS--SCHHHHHHHHHHHHHHH
T ss_pred ceEcccCCCcceeeecccccccccCCHHHHHhcCCCCCeEEEEEcc--CCHHHHHHHHHHHHHHh
Confidence 88742110 11 4799999976 45566666666666543
No 179
>4e77_A Glutamate-1-semialdehyde 2,1-aminomutase; structural genomics, center for structural genomics of infec diseases, csgid, porphyrin biosynthesis; 2.00A {Yersinia pestis}
Probab=99.96 E-value=5.3e-29 Score=238.24 Aligned_cols=344 Identities=15% Similarity=0.034 Sum_probs=214.2
Q ss_pred ccCcceeEecccCCCCCCCCC-CcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChH
Q 014936 32 KNEKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCT 110 (415)
Q Consensus 32 ~~~~~~i~l~~g~~~~~~~~~-~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~ 110 (415)
.+++.++||..+..... ++ .+|.+++++.+++.......|+. ....++++.+++++ + .++++++++|++
T Consensus 50 ~~g~~ylD~~~~~~~~~--lG~~~p~v~~A~~~~~~~~~~~~~~~-~~~~~la~~l~~~~----~---~~~~v~~~~sGs 119 (429)
T 4e77_A 50 VDGKAYIDYVGSWGPMI--LGHNHPAIRQAVIEAVERGLSFGAPT-EMEVKMAQLVTDLV----P---TMDMVRMVNSGT 119 (429)
T ss_dssp TTCCEEEESSGGGTTCT--TCBTCHHHHHHHHHHHTTCSCCSSCC-HHHHHHHHHHHHHS----T---TCSEEEEESSHH
T ss_pred CCCCEEEECCCchhccc--cCCCCHHHHHHHHHHHHhCcccCCCC-HHHHHHHHHHHhhC----C---CCCEEEEeCcHH
Confidence 35788999998864322 33 57999999999987654334543 33455666666554 3 578999999999
Q ss_pred HHHHHHHHHhc--CCCCEEEEcCCCCcchHHHHH-hCCCeEE--EeeccCCC------C----CCCChhHHHhhcCC--C
Q 014936 111 QAIDVAMALLS--RPGANILLPRPGFPIYELSAA-FRHIEVR--HFDLLPDK------G----WEVDLDDIESLADQ--N 173 (415)
Q Consensus 111 ~al~~~~~~l~--~~gd~vi~~~p~y~~~~~~~~-~~g~~~~--~~~~~~~~------~----~~~~~~~l~~~~~~--~ 173 (415)
++++.+++... .+++.|++..++|++....+. ..+.... ..+....- . ...|+++|+++++. .
T Consensus 120 ea~~~al~~a~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~ 199 (429)
T 4e77_A 120 EATMSAIRLARGYTGRDKIIKFEGCYHGHADCLLVKAGSGALTLGQPNSPGVPTDFAKHTLTCTYNDLASVRQAFEQYPQ 199 (429)
T ss_dssp HHHHHHHHHHHHHHCCCEEEEETTCCCC------------------CCCTTSCGGGGTTEEEECTTCHHHHHHHHHHSTT
T ss_pred HHHHHHHHHHHHhhCCCEEEEEcCccCCCChhhhhhcCCcccccCCCCcCCCCCccCCceeecCCCCHHHHHHHHHhcCC
Confidence 99999998643 245789999999987665221 1111100 00100000 0 00278999988863 3
Q ss_pred ceEEEecCCCCccc-cC-CCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCC
Q 014936 174 TVALVIINPGNPCG-NV-YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPG 251 (415)
Q Consensus 174 ~~~v~i~~p~nptG-~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G 251 (415)
..++++++|+|++| .+ .+.+.+++|.++|++||+++|+||+|.++ ..+.. .....++...+ +.|+||.++ +|
T Consensus 200 ~~~~vi~ep~~~~~g~~~~~~~~l~~l~~l~~~~~~lli~DEv~~g~-r~g~~-~~~~~~~~~pd---i~t~sK~~~-~G 273 (429)
T 4e77_A 200 EVACIIVEPVAGNMNCIPPLPEFLPGLRALCDEFGALLIIDEVMTGF-RVALA-GAQDYYHVIPD---LTCLGKIIG-GG 273 (429)
T ss_dssp TEEEEEECSSBCTTSCBCCCTTHHHHHHHHHHHHTCEEEEEETTTBT-TTBTT-CHHHHTTCCCS---EEEEEGGGG-TT
T ss_pred CEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCc-ccCcc-hHHHhcCCCCC---eeeeccccc-CC
Confidence 45667788876554 43 34666999999999999999999999987 44432 12222222222 248899987 79
Q ss_pred ceEEEEEeeCCCCCCChHHHHHHHHhh----ccccCCchhHHHHHHHHhhCCCc-HHHHHHHHHHHHHHHHHHHHHhhcC
Q 014936 252 WRLGWFVTTDPCGMFRKPKVVERMKKY----FDILGDPATFIQAAVPSILQQPD-EVFFKKTLNLLKQSVDICYNKIKEI 326 (415)
Q Consensus 252 ~r~G~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~a~~~~l~~~~-~~~~~~~~~~~~~~~~~l~~~l~~~ 326 (415)
+|+||+++++ ++++.+... ...+++.+++++.++.++|+... ++..++..+.....++.+.+.+..+
T Consensus 274 ~~~G~~~~~~--------~~~~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~ 345 (429)
T 4e77_A 274 MPVGAFGGRR--------EVMNALAPTGPVYQAGTLSGNPIAMAAGFACLTEISQVGVYETLTELTDSLATGLRHAAKEE 345 (429)
T ss_dssp SCCEEEEECH--------HHHTTBTTTSSBCC--CCCCCHHHHHHHHHHHHHHTSTTHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCeEEEEECH--------HHHHHhccCCCccccCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhC
Confidence 9999999865 576666542 22345788899988888876321 2333333333333344444444444
Q ss_pred CCCcCCCCCCCceEEEEecCccc-cC--------CCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEeeCChhhHHHH
Q 014936 327 PCISCPHKPEGSMAVMLKLNLSL-LD--------DIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFAVDPYSLEEC 397 (415)
Q Consensus 327 ~~~~~~~~p~~g~~~~~~l~~~~-~~--------~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~~~l~~~ 397 (415)
+ +. ...+..|+++|+.++... .. +.....++...++ ++||.+.|+.. ..+|+++..++++++++
T Consensus 346 ~-~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gi~v~~~~~----~~~~~~~~~t~e~i~~~ 418 (429)
T 4e77_A 346 N-IP-LVVNHVGGMFGLFFTNADTVTCYQDVMNCDVERFKRFFHLML-EEGVYLAPSAF----EAGFMSLAHSNEDIQKT 418 (429)
T ss_dssp T-CC-CEEEEETTEEEEECCSSSCCCSHHHHHTSCHHHHHHHHHHHH-HTTEECCSSTT----SCEECCTTCCHHHHHHH
T ss_pred C-Cc-eEEEEeeeEEEEEEccCcccccccccccccHHHHHHHHHHHH-HCCeEEeecCC----CCEEEeccCCHHHHHHH
Confidence 3 32 224556888998886421 00 0001155666664 56999998753 45777777899999999
Q ss_pred HHHHHHHHH
Q 014936 398 LDRIKSFYQ 406 (415)
Q Consensus 398 l~~l~~~~~ 406 (415)
+++|+++++
T Consensus 419 l~~l~~~l~ 427 (429)
T 4e77_A 419 VNAARRCFA 427 (429)
T ss_dssp HHHHHHHHT
T ss_pred HHHHHHHHH
Confidence 999998875
No 180
>3frk_A QDTB; aminotransferase, sugar-modification, natural porduct; HET: TQP; 2.15A {Thermoanaerobacteriumthermosaccharolyticum}
Probab=99.96 E-value=7.2e-29 Score=232.97 Aligned_cols=322 Identities=14% Similarity=0.116 Sum_probs=223.1
Q ss_pred ceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHH
Q 014936 36 KVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDV 115 (415)
Q Consensus 36 ~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~ 115 (415)
++++++.+.| ..++.+++++.+.+... .|.+..+..++|+.++++++ .+++++++||++++..
T Consensus 4 ~~~~l~~~~~------~~~~~~~~a~~~~~~~~---~~~~~~~~~~l~~~la~~~~--------~~~~i~~~sgt~al~~ 66 (373)
T 3frk_A 4 SFASFKPMHD------EIEYEIKFKFEEIYKRN---WFILGDEDKKFEQEFADYCN--------VNYCIGCGNGLDALHL 66 (373)
T ss_dssp CSCCCHHHHH------HHHHHHHHHHHHHHHHT---CCSSSHHHHHHHHHHHHHHT--------SSEEEEESCHHHHHHH
T ss_pred cccCCCcccC------CCCHHHHHHHHHHHHCC---CccCCchHHHHHHHHHHHhC--------CCeEEEeCCHHHHHHH
Confidence 3456665542 23577888888887653 35555688999999999983 3589999999999999
Q ss_pred HHHHh-cCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHH
Q 014936 116 AMALL-SRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQH 194 (415)
Q Consensus 116 ~~~~l-~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~ 194 (415)
++.++ .++||+|+++.++|+++...++..|++++.+++++ +++.+|++++++++++++++++ |+||||... +
T Consensus 67 ~l~~l~~~~gd~Vi~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~d~~~l~~~l~~~~~~v~---~~n~~G~~~---~ 139 (373)
T 3frk_A 67 ILKGYDIGFGDEVIVPSNTFIATALAVSYTGAKPIFVEPDI-RTYNIDPSLIESAITEKTKAII---AVHLYGQPA---D 139 (373)
T ss_dssp HHHHTTCCTTCEEEEETTSCTHHHHHHHHHSCEEEEECEET-TTTEECGGGTGGGCCTTEEEEE---EECCTTCCC---C
T ss_pred HHHHcCCCCcCEEEECCCCcHHHHHHHHHcCCEEEEEeccc-cccCcCHHHHHHhcCCCCeEEE---EECCCcCcc---c
Confidence 99999 89999999999999999999999999999999865 3467899999999988888777 778999984 5
Q ss_pred HHHHHHHHhhcCcEEEEccccCCcc-cCCCCcccccccCCCCCeEEEccCc--cccCCCCceEEEEEeeCCCCCCChHHH
Q 014936 195 LQKLAETANKLKTLVIADEVYGHLV-FGDKPFVPMGVFGSTVPILTLGSLS--KRWIVPGWRLGWFVTTDPCGMFRKPKV 271 (415)
Q Consensus 195 l~~i~~~~~~~~~~li~De~~~~~~-~~~~~~~~~~~~~~~~~~i~~~s~s--K~~~~~G~r~G~~~~~~~~~~~~~~~~ 271 (415)
+++|.++|+++|+++|+|++|+.+. +++. ....+. + +.+.||| |.++..| +.|++++++ +++
T Consensus 140 l~~i~~l~~~~~~~li~D~a~~~g~~~~~~---~~~~~~-d---~~~~S~~~~K~l~~~g-~gg~~~~~~-------~~~ 204 (373)
T 3frk_A 140 MDEIKRIAKKYNLKLIEDAAQAHGSLYKGM---KVGSLG-D---AAGFSFYPAKNLGSLG-DGGAVVTND-------KDL 204 (373)
T ss_dssp HHHHHHHHHHHTCEEEEECTTCTTCEETTE---ETTSSS-S---EEEEECCTTSSSCCSS-SCEEEEESC-------HHH
T ss_pred HHHHHHHHHHcCCEEEEECCcccCCEECCE---eccccc-c---EEEEeCcCCCccCccc-eeEEEEeCC-------HHH
Confidence 7788888999999999999998644 2222 111111 1 6777877 8864434 378888764 246
Q ss_pred HHHHHhhccc-------------cCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCc
Q 014936 272 VERMKKYFDI-------------LGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGS 338 (415)
Q Consensus 272 ~~~~~~~~~~-------------~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g 338 (415)
.+.++..... +...+.+...+....+ +.+++..++.+++.+++.+.|++++ +.....+.++
T Consensus 205 ~~~~~~~~~~g~~~~~~~~~~g~~~~~~~~~aa~~~~~~-----~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~ 278 (373)
T 3frk_A 205 AEKIKALSNYGSEKKYHHIYKGFNSRLDELQAGFLRVKL-----KYLDKWNEERRKIAQKYIAGINNPN-VIIPVEADYA 278 (373)
T ss_dssp HHHHHHHHBTTCSBTTBCCSCCCBCCCCHHHHHHHHHHH-----HTHHHHHHHHHHHHHHHHHHCCCTT-EECCCCCTTE
T ss_pred HHHHHHHHhcCcccCCccccccccCCCCHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHhccCc-eEeccCCCCC
Confidence 6666544321 1122444333333333 3366777888888899999998875 5522222222
Q ss_pred eEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCC-----------------------CCeEEEEee--CChhh
Q 014936 339 MAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGL-----------------------KNWLRVTFA--VDPYS 393 (415)
Q Consensus 339 ~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~-----------------------~~~iRi~~~--~~~~~ 393 (415)
...|..++.. ..+..++...| .++||.+.++..... .+.+|+++. ++++|
T Consensus 279 ~~~~~~~~~~----~~~~~~l~~~L-~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lrl~~~~~~t~~d 353 (373)
T 3frk_A 279 KHVWYTFVIR----SEKRDELQKYL-NNNGIGTLIHYPIPIHLQQAYKDLGFKTGNFPIAEKIANEILSIPIWYGMKNEE 353 (373)
T ss_dssp ECCCSSEEEE----ESSHHHHHHHH-HHTTBCCBCSCSSCGGGSGGGGGGCCCTTSSHHHHHHHHHEEEECCCTTCCHHH
T ss_pred ceeeEEEEEE----eCCHHHHHHHH-HHCCCCcccCcCCccccChHHHhcCCCCCCCHHHHHHHhCEEEccCCCCCCHHH
Confidence 2222111110 01355565555 566999987652110 157999994 68999
Q ss_pred HHHHHHHHHHHHHH
Q 014936 394 LEECLDRIKSFYQR 407 (415)
Q Consensus 394 l~~~l~~l~~~~~~ 407 (415)
++.+++.|++...+
T Consensus 354 i~~~~~~l~~~~~~ 367 (373)
T 3frk_A 354 IEYVIDKINAWKLE 367 (373)
T ss_dssp HHHHHHHHHTCC--
T ss_pred HHHHHHHHHHHhhh
Confidence 99999999877654
No 181
>3dr4_A Putative perosamine synthetase; deoxysugar, pyridoxal phosphate, aspartate aminotransferase, O-antigen; HET: G4M; 1.60A {Caulobacter crescentus} PDB: 3dr7_A* 3bn1_A*
Probab=99.96 E-value=2.5e-28 Score=230.76 Aligned_cols=322 Identities=14% Similarity=0.127 Sum_probs=222.7
Q ss_pred CcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCC-CCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHH
Q 014936 34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYA-PTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQA 112 (415)
Q Consensus 34 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~-~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~a 112 (415)
-.++++++.+.|. + ++.+++++.+.+..+ .|+ +..+..++|+.++++++ .+++++++||+++
T Consensus 21 ~~~~~~l~~~~p~----~--~~~~~~a~~~~~~~~---~~~~~~~~~~~l~~~la~~~~--------~~~~i~~~~gt~a 83 (391)
T 3dr4_A 21 MSDLPRISVAAPR----L--DGNERDYVLECMDTT---WISSVGRFIVEFEKAFADYCG--------VKHAIACNNGTTA 83 (391)
T ss_dssp -------CCCCCC----C--CSSHHHHHHHHHHHT---CCSSCSHHHHHHHHHHHHHHT--------CSEEEEESSHHHH
T ss_pred cCCCceeccCCCC----C--CHHHHHHHHHHHHcC---CccCCChHHHHHHHHHHHHhC--------CCcEEEeCCHHHH
Confidence 4567889988864 2 367888888887653 344 55688999999999993 3488999999999
Q ss_pred HHHHHHHh-cCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCC
Q 014936 113 IDVAMALL-SRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYS 191 (415)
Q Consensus 113 l~~~~~~l-~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~ 191 (415)
+..++.++ .++||+|+++.|+|+++...++..|.+++.+++++ +++.+|++++++++++++++++ |+||||...
T Consensus 84 l~~~l~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~d~~~l~~~~~~~~~~v~---~~n~tG~~~- 158 (391)
T 3dr4_A 84 LHLALVAMGIGPGDEVIVPSLTYIASANSVTYCGATPVLVDNDP-RTFNLDAAKLEALITPRTKAIM---PVHLYGQIC- 158 (391)
T ss_dssp HHHHHHHHTCCTTCEEEEESSSCTHHHHHHHHTTCEEEEECBCT-TTCSBCGGGSGGGCCTTEEEEC---CBCGGGCCC-
T ss_pred HHHHHHHcCCCCcCEEEECCCchHHHHHHHHHCCCEEEEEecCc-cccCcCHHHHHHhcCCCceEEE---EECCCCChh-
Confidence 99999999 89999999999999999999999999999999864 3567999999999988888766 567999984
Q ss_pred HHHHHHHHHHHhhcCcEEEEccccCCcc-cCCCCcccccccCCCCCeEEEccCc--cccCCCCceEEEEEeeCCCCCCCh
Q 014936 192 YQHLQKLAETANKLKTLVIADEVYGHLV-FGDKPFVPMGVFGSTVPILTLGSLS--KRWIVPGWRLGWFVTTDPCGMFRK 268 (415)
Q Consensus 192 ~~~l~~i~~~~~~~~~~li~De~~~~~~-~~~~~~~~~~~~~~~~~~i~~~s~s--K~~~~~G~r~G~~~~~~~~~~~~~ 268 (415)
++++|+++|+++|+++|+|++|+.+. +.+. ....+. + +.+.||| |. ++|.+.|++++++
T Consensus 159 --~~~~i~~l~~~~~~~li~D~a~~~g~~~~~~---~~~~~~-d---i~~~S~s~~K~--l~~g~gg~~~~~~------- 220 (391)
T 3dr4_A 159 --DMDPILEVARRHNLLVIEDAAEAVGATYRGK---KSGSLG-D---CATFSFFGNAI--ITTGEGGMITTND------- 220 (391)
T ss_dssp --CHHHHHHHHHHTTCEEEEECTTCTTCEETTE---ETTSSS-S---EEEEECBTTSS--SCCBSCEEEEESC-------
T ss_pred --hHHHHHHHHHHcCCEEEEECcccccceECCe---eecccC-C---EEEEECCCCCc--CCcCCeEEEEECC-------
Confidence 57888889999999999999998643 2221 111221 1 6667766 66 4556789988865
Q ss_pred HHHHHHHHhhcccc---------------CCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCC
Q 014936 269 PKVVERMKKYFDIL---------------GDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPH 333 (415)
Q Consensus 269 ~~~~~~~~~~~~~~---------------~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~ 333 (415)
+++.+.++...... ...+.+...+....+ ..+++..++.+++++++.+.|+++ ++....
T Consensus 221 ~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~l~aa~~~~~~-----~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~ 294 (391)
T 3dr4_A 221 DDLAAKMRLLRGQGMDPNRRYWFPIVGFNYRMTNIQAAIGLAQL-----ERVDEHLAARERVVGWYEQKLARL-GNRVTK 294 (391)
T ss_dssp HHHHHHHHHHHBTTCCTTSTTCCSSCCCBCBCCHHHHHHHHHHH-----HTHHHHHHHHHHHHHHHHHHHGGG-TTSEEC
T ss_pred HHHHHHHHHHHhcCCCCCCcccccccccccCCCHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHhhcC-CccccC
Confidence 24666655443211 122222222222222 346677788888888999999887 666332
Q ss_pred C--C----CCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCC---C-----------------CCCeEEEEe
Q 014936 334 K--P----EGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAV---G-----------------LKNWLRVTF 387 (415)
Q Consensus 334 ~--p----~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~---~-----------------~~~~iRi~~ 387 (415)
. + .....+++.++.. .+ .+..++...+ .++||.+.+|... . ....+|+++
T Consensus 295 ~~~~~~~~~~~~~~~i~~~~~--~~-~~~~~l~~~L-~~~GI~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~lrl~~ 370 (391)
T 3dr4_A 295 PHVALTGRHVFWMYTVRLGEG--LS-TTRDQVIKDL-DALGIESRPVFHPMHIMPPYAHLATDDLKIAEACGVDGLNLPT 370 (391)
T ss_dssp CCCCTTSCCCCSSEEEEECSS--CS-SCHHHHHHHH-HHTTCCCEECCCCGGGSGGGGGGCCTTCHHHHHHHHHEEEECC
T ss_pred cCCCCCCcceeEEEEEEECCc--cc-hhHHHHHHHH-HHCCCceeecCCccccChhhhhcCcCCChHHHHHHhCeEEccC
Confidence 2 1 1222345555431 01 2456666665 5669999987521 0 035799998
Q ss_pred e--CChhhHHHHHHHHHHHH
Q 014936 388 A--VDPYSLEECLDRIKSFY 405 (415)
Q Consensus 388 ~--~~~~~l~~~l~~l~~~~ 405 (415)
. .++++++.+++.|++++
T Consensus 371 ~~~~t~edi~~~~~~l~~~l 390 (391)
T 3dr4_A 371 HAGLTEADIDRVIAALDQVL 390 (391)
T ss_dssp CTTCCHHHHHHHHHHHHTTC
T ss_pred CCCCCHHHHHHHHHHHHHHh
Confidence 4 68999999999987653
No 182
>3ecd_A Serine hydroxymethyltransferase 2; ssgcid, decode, bupsa00008A, one-carbon metabolism, pyridoxa phosphate, structural genomics; 1.60A {Burkholderia pseudomallei}
Probab=99.96 E-value=1.1e-27 Score=228.80 Aligned_cols=335 Identities=12% Similarity=0.102 Sum_probs=211.3
Q ss_pred cceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCC------CCCCcHHHH----HHHHHHHhhhCCCCCCCCcEE
Q 014936 35 KKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYA------PTAGLPLTR----RAIAEYLSRDLPYKLTPNDVF 104 (415)
Q Consensus 35 ~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~------~~~g~~~lr----~~ia~~~~~~~~~~~~~~~i~ 104 (415)
.+.+++..+. .+.++.+++++.+.+.......|+ .......++ +.+++++ | .+. ..+
T Consensus 32 ~~~i~l~~~~------~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~----~--~~~-~~v 98 (425)
T 3ecd_A 32 QSQVELIASE------NIVSRAVLDAQGSVLTNKYAEGYPGKRYYGGCEFADEVEALAIERVKRLF----N--AGH-ANV 98 (425)
T ss_dssp HHSEECCTTC------CCCCHHHHHHHTSGGGSSCTTC------------CCHHHHHHHHHHHHHH----T--CSE-EEC
T ss_pred hcceeeeccc------CCCCHHHHHHHhhhhhcccccCCCcchhcCCChHHHHHHHHHHHHHHHHh----C--CCC-cee
Confidence 3467886665 233899999998887532111222 111111222 3344444 2 222 234
Q ss_pred EeCChHHHHHHHHHHhcCCCCEEEEcCCCCcc-hHHH--HHhCCC--eEEEeeccCCCCCCCChhHHHhhcC-CCceEEE
Q 014936 105 VTSGCTQAIDVAMALLSRPGANILLPRPGFPI-YELS--AAFRHI--EVRHFDLLPDKGWEVDLDDIESLAD-QNTVALV 178 (415)
Q Consensus 105 i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~-~~~~--~~~~g~--~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~v~ 178 (415)
+++||++++..++.++.++||+|+++.|+|++ .... ....|. .+..++.++ +++.+|+++|++.++ +++++|+
T Consensus 99 ~~~~Gs~a~~~al~~~~~~gd~Vi~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~~d~~~l~~~i~~~~~~~v~ 177 (425)
T 3ecd_A 99 QPHSGAQANGAVMLALAKPGDTVLGMSLDAGGHLTHGAKPALSGKWFNALQYGVSR-DTMLIDYDQVEALAQQHKPSLII 177 (425)
T ss_dssp CCSSHHHHHHHHHHHHCCTTCEEEEECC------------------CEEEEECCCT-TTSSCCHHHHHHHHHHHCCSEEE
T ss_pred ecCchHHHHHHHHHHccCCCCEEEEcccccccceecchhhhhcccceeeeecCCCc-ccCccCHHHHHHHHhhcCCcEEE
Confidence 58899999999999999999999999999987 2222 223454 444555443 346799999999886 5789999
Q ss_pred ecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcc-cCCCCcccccccCCCCCeEEEccCccccCCCCceEEEE
Q 014936 179 IINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLV-FGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWF 257 (415)
Q Consensus 179 i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~-~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~ 257 (415)
+++|+||+ . .++++|.++|+++|+++|+||+|.... +.+.....+.. . .+++.|+||++ +|+|+||+
T Consensus 178 ~~~~~~~~--~---~~l~~i~~l~~~~~~~li~De~~~~g~~~~~~~~~~~~~--~---di~~~s~sK~l--~g~~~g~~ 245 (425)
T 3ecd_A 178 AGFSAYPR--K---LDFARFRAIADSVGAKLMVDMAHIAGVIAAGRHANPVEH--A---HVVTSTTHKTL--RGPRGGFV 245 (425)
T ss_dssp EECSCCCS--C---CCHHHHHHHHHHHTCEEEEECGGGHHHHHTTSSCCGGGT--C---SEEEEESSGGG--CCCSCEEE
T ss_pred EccccCCC--c---CCHHHHHHHHHHcCCEEEEECcChHhhhhcccccCchhc--C---cEEEecCCccc--CCCCcEEE
Confidence 99999964 3 457899999999999999999964433 33332222221 1 27889999996 67889999
Q ss_pred EeeCCCCCCChHHHHHHHHhhcccc--CCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCC
Q 014936 258 VTTDPCGMFRKPKVVERMKKYFDIL--GDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKP 335 (415)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p 335 (415)
++++ +.+.+.+....... .+++.....++..++......++++..++++++++++.+.|++. ++.++..+
T Consensus 246 ~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~ 317 (425)
T 3ecd_A 246 LTND-------EEIAKKINSAVFPGLQGGPLMHVIAGKAVAFGEALTDDFKTYIDRVLANAQALGDVLKAG-GVDLVTGG 317 (425)
T ss_dssp EESC-------HHHHHHHHHHHC-----CCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHT-TCEEGGGS
T ss_pred EeCC-------HHHHHHHHhhhCccccCCccHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhC-CCeeccCC
Confidence 9874 24666665543321 23344444444434332223567888899999999999999886 77633223
Q ss_pred CCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEE----cCCCCC--CCCeEEEEee------CChhhHHHHHHHHHH
Q 014936 336 EGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIIL----PGTAVG--LKNWLRVTFA------VDPYSLEECLDRIKS 403 (415)
Q Consensus 336 ~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~----~g~~~~--~~~~iRi~~~------~~~~~l~~~l~~l~~ 403 (415)
..++++|+.++... .+. +.+...|.++||.+. ||..+. ..+++|+++. .++++++++++.|++
T Consensus 318 ~~~~~~~~~~~~~~----~~~-~~~~~~l~~~gi~v~~~~~p~~~~~~~~~~~iRi~~~~~~~~~~~~e~i~~~~~~l~~ 392 (425)
T 3ecd_A 318 TDNHLLLVDLRPKG----LKG-AQVEQALERAGITCNKNGIPFDPEKPTITSGIRLGTPAGTTRGFGAAEFREVGRLILE 392 (425)
T ss_dssp CSSSEEEEECGGGT----CCH-HHHHHHHHHTTEECEECCCTTCSSCTTTCSEEEEESHHHHHTTCCHHHHHHHHHHHHH
T ss_pred CCceEEEEEeCCCC----CCH-HHHHHHHHHcCCEecccccCCCCCCCCCccceeccchhheeccCCHHHHHHHHHHHHH
Confidence 56788888875321 133 445555677899999 443221 2468999962 348999999999999
Q ss_pred HHHHH
Q 014936 404 FYQRH 408 (415)
Q Consensus 404 ~~~~~ 408 (415)
++++.
T Consensus 393 ~l~~~ 397 (425)
T 3ecd_A 393 VFEAL 397 (425)
T ss_dssp HHHHH
T ss_pred HHhcc
Confidence 98775
No 183
>3e9k_A Kynureninase; kynurenine-L-hydrolase, kynurenine hydrolase, pyridoxal-5'-phosphate, inhibitor complex, 3-hydroxy hippur hydroxyhippuric acid, PLP; HET: PLP 3XH; 1.70A {Homo sapiens} PDB: 2hzp_A*
Probab=99.96 E-value=8e-29 Score=239.47 Aligned_cols=332 Identities=11% Similarity=0.060 Sum_probs=226.0
Q ss_pred cceeEecccCCCCCCCCCCcHHHHHHHHHHHh----cC---CCCCCC-CCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEe
Q 014936 35 KKVISLAMGDPTVHSCFHTTHVATEAVAEALL----SE---KFNGYA-PTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVT 106 (415)
Q Consensus 35 ~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~----~~---~~~~y~-~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~ 106 (415)
++.+.|+.+... +.++.+.+++.+.+. .+ ....|. ......++++.+++++ +.++++|++|
T Consensus 66 ~~~iyld~~~~g-----~~p~~v~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~------g~~~~~v~~t 134 (465)
T 3e9k_A 66 ENAIYFLGNSLG-----LQPKMVKTYLEEELDKWAKIAAYGHEVGKRPWITGDESIVGLMKDIV------GANEKEIALM 134 (465)
T ss_dssp CBCEECBTTTSC-----CEETTHHHHHHHHHHHHHHHGGGGGTSSSSCGGGTTHHHHGGGHHHH------TCCGGGEEEC
T ss_pred CCeEEecCCccC-----CChHHHHHHHHHHHHHHHhhCCcccccCCccHHHhHHHHHHHHHHHc------CCCcCCEEEE
Confidence 466777766532 223445555544432 11 111121 1233467888888887 4578999999
Q ss_pred CChHHHHHHHHHHhcCCCCE---EEEcCCCCcchHH----HHHhCCCeEEE--eecc-CCCCCCCChhHHHhhcC---CC
Q 014936 107 SGCTQAIDVAMALLSRPGAN---ILLPRPGFPIYEL----SAAFRHIEVRH--FDLL-PDKGWEVDLDDIESLAD---QN 173 (415)
Q Consensus 107 ~g~~~al~~~~~~l~~~gd~---vi~~~p~y~~~~~----~~~~~g~~~~~--~~~~-~~~~~~~~~~~l~~~~~---~~ 173 (415)
+|+++++++++.++.++|+. |+++.|+|++... .++..|+++.. +.+. .++++.+|+++++++++ ++
T Consensus 135 ~g~t~al~~~~~~~~~~~~~~~~Vl~~~~~~~s~~~~~~~~~~~~G~~~~~~~v~~~~~~~~~~~d~~~l~~~i~~~~~~ 214 (465)
T 3e9k_A 135 NALTVNLHLLMLSFFKPTPKRYKILLEAKAFPSDHYAIESQLQLHGLNIEESMRMIKPREGEETLRIEDILEVIEKEGDS 214 (465)
T ss_dssp SCHHHHHHHHHHHHCCCCSSSCEEEEETTCCHHHHHHHHHHHHHTTCCHHHHEEEECCCTTCSSCCHHHHHHHHHHHGGG
T ss_pred CCHHHHHHHHHHHhccccCCCCEEEEcCCcCCchHHHHHHHHHHcCCcceeeeEEEecCCCCCccCHHHHHHHHHhcCCC
Confidence 99999999999999876654 9999999987443 56678887532 1211 22456789999999986 57
Q ss_pred ceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCce
Q 014936 174 TVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWR 253 (415)
Q Consensus 174 ~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r 253 (415)
+++|++++|+||||.+++ +++|.++|+++|+++|+|++|+... ....+...+. .++++|++|.+..+..+
T Consensus 215 ~~lv~~~~~~n~tG~~~~---l~~i~~la~~~g~~vi~D~a~~~g~----~~~~~~~~~~---D~~~~s~~K~l~~gp~~ 284 (465)
T 3e9k_A 215 IAVILFSGVHFYTGQHFN---IPAITKAGQAKGCYVGFDLAHAVGN----VELYLHDWGV---DFACWCSYKYLNAGAGG 284 (465)
T ss_dssp EEEEEEESBCTTTCBBCC---HHHHHHHHHHTTCEEEEECTTTTTT----SCCCHHHHTC---CEEEECSSSTTCCCTTC
T ss_pred eEEEEEeCcccCcceeec---HHHHHHHHHHcCCEEEEEhhhhcCC----cCCchhhcCC---CEEEECcccccccCCCc
Confidence 899999999999999976 6778888999999999999998632 2223333333 37888999997433336
Q ss_pred EEEEEeeCCCCCCChHHHHHHHHhh--------------------------ccccCCchhHHHHHHHHhhCCCcHHHHHH
Q 014936 254 LGWFVTTDPCGMFRKPKVVERMKKY--------------------------FDILGDPATFIQAAVPSILQQPDEVFFKK 307 (415)
Q Consensus 254 ~G~~~~~~~~~~~~~~~~~~~~~~~--------------------------~~~~~~~~~~~~~a~~~~l~~~~~~~~~~ 307 (415)
+|++++++. +.+.+... ....++++.....++.++++...+..+++
T Consensus 285 ~g~l~~~~~--------~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~aal~~~~~~~~~~ 356 (465)
T 3e9k_A 285 IAGAFIHEK--------HAHTIKPALVGWFGHELSTRFKMDNKLQLIPGVCGFRISNPPILLVCSLHASLEIFKQATMKA 356 (465)
T ss_dssp CCEEEECGG--------GTTTSCCSSCCGGGBCHHHHTTCCSCCCBCSSGGGGCCSCCCHHHHHHHHHHHHHHHHHCHHH
T ss_pred eEEEEEcHH--------HHhhcCCcccCccCCCCCcccccCCCcCcCCChHHhccCCccHHHHHHHHHHHHHHHHcCHHH
Confidence 899888652 21111100 00112566666676666665432234788
Q ss_pred HHHHHHHHHHHHHHHhhcC----------CCCcCCCCCC----CceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEc
Q 014936 308 TLNLLKQSVDICYNKIKEI----------PCISCPHKPE----GSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILP 373 (415)
Q Consensus 308 ~~~~~~~~~~~l~~~l~~~----------~~~~~~~~p~----~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~ 373 (415)
.+++.+++++++.+.|+++ +++.++ .|. .|.++++.++. +..++...+ .++||.+..
T Consensus 357 ~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~-~p~~~~~~g~~~~~~~~~-------~~~~l~~~L-~~~Gi~v~~ 427 (465)
T 3e9k_A 357 LRKKSVLLTGYLEYLIKHNYGKDKAATKKPVVNII-TPSHVEERGCQLTITFSV-------PNKDVFQEL-EKRGVVCDK 427 (465)
T ss_dssp HHHHHHHHHHHHHHHHHHHCC---------CEEEC-SCSSGGGBCSCEEEEECC-------TTCCHHHHH-HTTTEECEE
T ss_pred HHHHHHHHHHHHHHHHHhhccccccccCCCCeEEe-CCCCHhhcccEEEEEecC-------CHHHHHHHH-HHCCEEEec
Confidence 8899999999999999874 677733 554 36788877752 234556665 456999873
Q ss_pred CCCCCCCCeEEEEe-e--CChhhHHHHHHHHHHHHHHH
Q 014936 374 GTAVGLKNWLRVTF-A--VDPYSLEECLDRIKSFYQRH 408 (415)
Q Consensus 374 g~~~~~~~~iRi~~-~--~~~~~l~~~l~~l~~~~~~~ 408 (415)
..++++|+++ . ++.++++.+++.|++++++.
T Consensus 428 ----~~~~~iRis~~~~~~t~edi~~~~~~l~~~l~~~ 461 (465)
T 3e9k_A 428 ----RNPNGIRVAPVPLYNSFHDVYKFTNLLTSILDSA 461 (465)
T ss_dssp ----ETTTEEEEBCCTTTCCHHHHHHHHHHHHHHHTC-
T ss_pred ----CCCCEEEEeCcccCCCHHHHHHHHHHHHHHHHhc
Confidence 2368999997 3 58899999999999988653
No 184
>3qhx_A Cystathionine gamma-synthase METB (CGS); structural genomics, seattle structural genomics center for infectious disease, ssgcid, CGS_LIKE; HET: LLP EPE; 1.65A {Mycobacterium ulcerans} SCOP: c.67.1.0 PDB: 3qi6_A*
Probab=99.96 E-value=2.3e-27 Score=223.65 Aligned_cols=284 Identities=17% Similarity=0.153 Sum_probs=209.7
Q ss_pred CCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHH----HhCCCeEEEee
Q 014936 77 AGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSA----AFRHIEVRHFD 152 (415)
Q Consensus 77 ~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~----~~~g~~~~~~~ 152 (415)
....++++.+++++ ..+++++++|+++++..++.++.++||+|+++.|+|+++...+ ...|.++..++
T Consensus 66 ~~~~~l~~~la~~~--------g~~~~~~~~sGt~A~~~al~~~~~~gd~Vi~~~~~y~~~~~~~~~~~~~~g~~~~~v~ 137 (392)
T 3qhx_A 66 PTRTALEAALAAVE--------DAAFGRAFSSGMAAADCALRAMLRPGDHVVIPDDAYGGTFRLIDKVFTGWNVEYTPVA 137 (392)
T ss_dssp HHHHHHHHHHHHHT--------TCSEEEEESSHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHHHTGGGGTCEEEEEC
T ss_pred hHHHHHHHHHHHHh--------CCCcEEEECCHHHHHHHHHHHHhCCCCEEEEeCCCcchHHHHHHHHHHhcCcEEEEeC
Confidence 45678899999987 2347899999999999999999999999999999999877666 66799998887
Q ss_pred ccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccC
Q 014936 153 LLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFG 232 (415)
Q Consensus 153 ~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~ 232 (415)
.+ |++++++++++++++|++.+|+||||.+.+ +++|+++|+++|+++|+|++|+.+... .+. .++
T Consensus 138 ~~-------d~~~l~~~i~~~~~~v~~~~~~nptG~~~~---l~~i~~la~~~g~~li~D~~~~~~~~~----~~~-~~~ 202 (392)
T 3qhx_A 138 LA-------DLDAVRAAIRPTTRLIWVETPTNPLLSIAD---IAGIAQLGADSSAKVLVDNTFASPALQ----QPL-SLG 202 (392)
T ss_dssp TT-------CHHHHHHHCCTTEEEEEEESSCTTTCCCCC---HHHHHHHHHHHTCEEEEECTTTCTTTC----CGG-GGT
T ss_pred CC-------CHHHHHHhhCCCCeEEEEECCCCCCcEEec---HHHHHHHHHHcCCEEEEECCCcccccC----ChH-HhC
Confidence 52 899999999999999999999999999965 888999999999999999999864321 111 222
Q ss_pred CCCCeEEEccCccccCCCC-ceEEEEEeeCCCCCCChHHHHHHHHhhcc-ccCCchhHHHHHHHHhhCCCcHHHHHHHHH
Q 014936 233 STVPILTLGSLSKRWIVPG-WRLGWFVTTDPCGMFRKPKVVERMKKYFD-ILGDPATFIQAAVPSILQQPDEVFFKKTLN 310 (415)
Q Consensus 233 ~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~ 310 (415)
. .+++.|+||.++.+| +++||+++++ +++.+.+..... .+...++..+.++...++. +..+.+
T Consensus 203 ~---di~~~S~sK~lg~~g~~~~G~v~~~~-------~~~~~~l~~~~~~~g~~~~~~~~~~~~~~l~~-----l~~~~~ 267 (392)
T 3qhx_A 203 A---DVVLHSTTKYIGGHSDVVGGALVTND-------EELDQSFAFLQNGAGAVPGPFDAYLTMRGLKT-----LVLRMQ 267 (392)
T ss_dssp C---SEEEEETTTTTTCSSCCCCEEEEESC-------HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHTT-----HHHHHH
T ss_pred C---cEEEEcCccccCCCCCceEEEEEECc-------HHHHHHHHHHHHhcCCCCCHHHHHHHHhhhhH-----HHHHHH
Confidence 2 388999999998877 7999999864 246676665532 4566778888888877765 556667
Q ss_pred HHHHHHHHHHHHhhcCCCCcCCCCCC----------------CceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcC
Q 014936 311 LLKQSVDICYNKIKEIPCISCPHKPE----------------GSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPG 374 (415)
Q Consensus 311 ~~~~~~~~l~~~l~~~~~~~~~~~p~----------------~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g 374 (415)
+..++++.+.+.|++.|.+..+.+|. .|..+++.++... .....++.. ++..++.++.|
T Consensus 268 ~~~~~~~~l~~~L~~~~~v~~v~~p~l~~~~~~~~~~~~~~g~g~~~~~~l~~~~----~~~~~~~~~-l~~~~~~~s~G 342 (392)
T 3qhx_A 268 RHSENAAAVAEFLAEHPAISTVLYPGLPSHPGHAVAARQMRGFGGMVSVRMRAGR----TAAEQLCAK-TNIFILAESLG 342 (392)
T ss_dssp HHHHHHHHHHHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEETTCH----HHHHHHHHH-CSSSEECSCCC
T ss_pred HHHHHHHHHHHHHhcCCCcceEECCCCCCCCCHHHHHHhCCCCceEEEEEeCCcH----HHHHHHHHh-CCCceECCCCC
Confidence 77888888888888876653232322 2567788785310 123344333 45567777777
Q ss_pred CCCC--------------------CCCeEEEEeeCChhhHHHHHHHHHHHH
Q 014936 375 TAVG--------------------LKNWLRVTFAVDPYSLEECLDRIKSFY 405 (415)
Q Consensus 375 ~~~~--------------------~~~~iRi~~~~~~~~l~~~l~~l~~~~ 405 (415)
+.+. .++.||||++. ++.++.++.|.+++
T Consensus 343 ~~~sl~~~~~~~~~~~~~~~~~g~~~~~iRlSvg~--e~~~~~i~~l~~al 391 (392)
T 3qhx_A 343 SVESLIEHPSAMTHASTAGSQLEVPDDLVRLSVGI--EDVADLLDDLKQAL 391 (392)
T ss_dssp CSSCEEECGGGTSCGGGBTTBCCCCTTEEEEECCS--SCHHHHHHHHHHHH
T ss_pred CCCceeeCcccccccccCHHHcCCCCCeEEEEecc--CCHHHHHHHHHHHh
Confidence 6532 14679999975 35555566555543
No 185
>3acz_A Methionine gamma-lyase; L-methionine; HET: LLP; 1.97A {Entamoeba histolytica} PDB: 3aej_A* 3ael_A* 3aem_A* 3aen_A* 3aeo_A* 3aep_A*
Probab=99.96 E-value=4.2e-27 Score=221.87 Aligned_cols=281 Identities=13% Similarity=0.143 Sum_probs=203.1
Q ss_pred CCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHH----HHhCCCeEEEee
Q 014936 77 AGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELS----AAFRHIEVRHFD 152 (415)
Q Consensus 77 ~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~----~~~~g~~~~~~~ 152 (415)
....++++.++++++ .++.+++++|++++..++.++.++||+|+++.|+|+++... ++..|.++..++
T Consensus 59 ~~~~~l~~~la~~~g--------~~~~i~~~sG~~ai~~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~~~~v~ 130 (389)
T 3acz_A 59 PTVEQFEEMVCSIEG--------AAGSAAFGSGMGAISSSTLAFLQKGDHLIAGDTLYGCTVSLFTHWLPRFGIEVDLID 130 (389)
T ss_dssp HHHHHHHHHHHHHHT--------CSEEEEESSHHHHHHHHHTTTCCTTCEEEEESSCCHHHHHHHHHHHHHTTCEEEEEC
T ss_pred hHHHHHHHHHHHHhC--------CCeEEEeCCHHHHHHHHHHHHhCCCCEEEEeCCCchHHHHHHHHHHHHcCCEEEEEC
Confidence 456789999999983 23677777888999999999999999999999999986665 577899999887
Q ss_pred ccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccC
Q 014936 153 LLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFG 232 (415)
Q Consensus 153 ~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~ 232 (415)
. .|++++++++++++++|++++|+||||.+++ +++|+++|+++|+++|+|++|..+.+. .++. ++
T Consensus 131 ~-------~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~---l~~i~~~~~~~~~~livD~~~~~~~~~----~~~~-~~ 195 (389)
T 3acz_A 131 T-------SDVEKVKAAWKPNTKMVYLESPANPTCKVSD---IKGIAVVCHERGARLVVDATFTSPCFL----KPLE-LG 195 (389)
T ss_dssp T-------TCHHHHHHTCCTTEEEEEEESSCTTTCCCCC---HHHHHHHHHHHTCEEEEECTTTCTTTC----CGGG-TT
T ss_pred C-------CCHHHHHHhcCCCCeEEEEECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCcccccc----Cccc-cC
Confidence 5 3899999999989999999999999999976 788888999999999999999876532 1221 22
Q ss_pred CCCCeEEEccCccccCCCCceE-EEEEeeCCCCCCChHHHHHHHHhhcc-ccCCchhHHHHHHHHhhCCCcHHHHHHHHH
Q 014936 233 STVPILTLGSLSKRWIVPGWRL-GWFVTTDPCGMFRKPKVVERMKKYFD-ILGDPATFIQAAVPSILQQPDEVFFKKTLN 310 (415)
Q Consensus 233 ~~~~~i~~~s~sK~~~~~G~r~-G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~ 310 (415)
..+++.|+||.++.+|.|+ ||+++++ +++++.++.... ...+.++..+.++...++. +..+.+
T Consensus 196 ---~di~~~S~sK~~~~~~~~~~G~v~~~~-------~~~~~~l~~~~~~~g~~~~~~~~~~~~~~l~~-----l~~r~~ 260 (389)
T 3acz_A 196 ---ADIALHSVSKYINGHGDVIGGVSSAKT-------AEDIATIKFYRKDAGSLMAPMDAFLCARGMKT-----LPIRMQ 260 (389)
T ss_dssp ---CSEEEEETTTTTTCSSCCCCEEEEESS-------HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHTT-----HHHHHH
T ss_pred ---CeEEEECChhhccCCCCceeEEEEECc-------HHHHHHHHHHHHhcCCCCCHHHHHHHHcCccH-----HHHHHH
Confidence 3488999999999999998 9998864 146666665532 3455677777777777764 344445
Q ss_pred HHHHHHHHHHHHhhcCCCCcCCCC----------------CCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEc-
Q 014936 311 LLKQSVDICYNKIKEIPCISCPHK----------------PEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILP- 373 (415)
Q Consensus 311 ~~~~~~~~l~~~l~~~~~~~~~~~----------------p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~- 373 (415)
+..+++..+.+.+++.+.+..+.. ...|.++.+.++ . .+....++.+.||.+.+
T Consensus 261 ~~~~~~~~l~~~l~~~~~v~~~~~~~L~~~~~~~~~~~~~~g~g~~~~~~l~--------~-~~~~~~~l~~~~i~~~~~ 331 (389)
T 3acz_A 261 IHMENGLKVAKFLEQHEKIVKVNHPGLESFPGHDIAKKQMTGYGSTFLFEMK--------S-FEAAKKLMEHLKVCTLAV 331 (389)
T ss_dssp HHHHHHHHHHHHHHHCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEES--------S-HHHHHHHHTTCSSSEEBS
T ss_pred HHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCCeEEEEEEC--------C-HHHHHHHHHhCCCcEECc
Confidence 555566666666655432111111 122456666664 2 33455667778988876
Q ss_pred --C------CCC----------------CC-CCeEEEEeeCChhhHHHHHHHHHHHHH
Q 014936 374 --G------TAV----------------GL-KNWLRVTFAVDPYSLEECLDRIKSFYQ 406 (415)
Q Consensus 374 --g------~~~----------------~~-~~~iRi~~~~~~~~l~~~l~~l~~~~~ 406 (415)
| ..| +. ++.||+|++.. +.++.++.|.++++
T Consensus 332 s~G~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iRlsvg~~--~~~~li~~l~~al~ 387 (389)
T 3acz_A 332 SLGCVDTLIEHPASMTHAAVPENIMRKQGITPELVRISVGIE--NVDDIIADLKQALE 387 (389)
T ss_dssp CCCCSSCEEECTTTTTTSSSCHHHHHHHTCCTTEEEEECCSS--CHHHHHHHHHHHHT
T ss_pred CCCCcccEeeCCcccccccCCHHHHHhcCCCcCeEEEEeccC--CHHHHHHHHHHHHh
Confidence 4 222 11 47999999764 66777777777654
No 186
>2cjg_A L-lysine-epsilon aminotransferase; internal aldimine, pyridoxal phosphate, PLP, RV3290C, lysine amino transferase; HET: PMP; 1.95A {Mycobacterium tuberculosis} PDB: 2cjd_A* 2cin_A* 2cjh_A* 2jjg_A* 2jje_A* 2jjh_A* 2jjf_A
Probab=99.96 E-value=8.8e-29 Score=237.72 Aligned_cols=335 Identities=12% Similarity=0.100 Sum_probs=221.3
Q ss_pred cCcceeEecccCCCCCCCCC-CcHHHH-H-HHHH---HHhcCCCC--CCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEE
Q 014936 33 NEKKVISLAMGDPTVHSCFH-TTHVAT-E-AVAE---ALLSEKFN--GYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVF 104 (415)
Q Consensus 33 ~~~~~i~l~~g~~~~~~~~~-~~~~~~-~-a~~~---~~~~~~~~--~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~ 104 (415)
+++.++||..+.+... ++ .+|.++ + ++.+ .+....+. .|.. ....++++.+++++ + ...+++|+
T Consensus 52 ~g~~ylD~~~~~~~~~--lG~~~p~v~~~~A~~~~~~~~~~~~~~~~~~~~-~~~~~la~~la~~~----~-~~~~~~v~ 123 (449)
T 2cjg_A 52 TGRRYLDMFTFVASSA--LGMNPPALVDDREFHAELMQAALNKPSNSDVYS-VAMARFVETFARVL----G-DPALPHLF 123 (449)
T ss_dssp TCCEEEESSHHHHTCS--SCBSCHHHHTCHHHHHHHHHHHTCCCCTTTCCC-HHHHHHHHHHHHHH----C-CTTCCEEE
T ss_pred CCcEEEEccCCccccC--CCCCCHHHHHHHHHHHHHHHHHhcCCCCcccCC-HHHHHHHHHHHHhc----C-CCCCCEEE
Confidence 3567888877764322 33 479999 8 9998 76653221 1322 22345556666655 2 24678999
Q ss_pred EeCChHHHHHHHHHHhc---C----------C-CCEEEEcCCCCcchHHHHHhC---------CC-----eEEEeeccCC
Q 014936 105 VTSGCTQAIDVAMALLS---R----------P-GANILLPRPGFPIYELSAAFR---------HI-----EVRHFDLLPD 156 (415)
Q Consensus 105 i~~g~~~al~~~~~~l~---~----------~-gd~vi~~~p~y~~~~~~~~~~---------g~-----~~~~~~~~~~ 156 (415)
+++|++++++.+++.+. + + ||+|++.+|+|+++...+... +. ++..++.+..
T Consensus 124 ~~~~gseA~~~aik~a~~~~~~~~~~~~~~~~~~~~Vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 203 (449)
T 2cjg_A 124 FVEGGALAVENALKAAFDWKSRHNQAHGIDPALGTQVLHLRGAFHGRSGYTLSLTNTKPTITARFPKFDWPRIDAPYMRP 203 (449)
T ss_dssp EESSHHHHHHHHHHHHHHHHHHHHHHTTSCTTCCCEEEEETTCCCCSSTTGGGTCCSCHHHHTTSCCCCCCEECCCCCCT
T ss_pred EeCchHHHHHHHHHHHHHHhcccccccccccCCCCEEEEECCCcCCcccchhhhcCCchhhcccCCCCCCCcEEEcCCCc
Confidence 99999999999997653 2 2 899999999999765533221 11 3444444210
Q ss_pred CCC--------CCChhHHHhhcC---CCceEEEecCC-CCccc-cCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCC
Q 014936 157 KGW--------EVDLDDIESLAD---QNTVALVIINP-GNPCG-NVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDK 223 (415)
Q Consensus 157 ~~~--------~~~~~~l~~~~~---~~~~~v~i~~p-~nptG-~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~ 223 (415)
... ..+++.|++.++ +++++ ++++| +||+| ..++.+.+++|.++|++||+++|+||+|.++.+.|.
T Consensus 204 ~~~~~~~~~~~~~~~~~le~~i~~~~~~~~~-vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~g~g~~g~ 282 (449)
T 2cjg_A 204 GLDEPAMAALEAEALRQARAAFETRPHDIAC-FVAEPIQGEGGDRHFRPEFFAAMRELCDEFDALLIFDEVQTGCGLTGT 282 (449)
T ss_dssp TCCHHHHHHHHHHHHHHHHHHHHHSTTTEEE-EEECSEETTTTCEECCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTSS
T ss_pred hhhccccchhhHHHHHHHHHHHHhcCCceEE-EEEeCcCCCCCCccCCHHHHHHHHHHHHHCCcEEEEeccccCCCccCc
Confidence 011 134566888774 45555 55556 68999 589999999999999999999999999998766554
Q ss_pred CcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHHHH-----Hhh-ccccCCchhHHHHHHHHhh
Q 014936 224 PFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERM-----KKY-FDILGDPATFIQAAVPSIL 297 (415)
Q Consensus 224 ~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~-----~~~-~~~~~~~~~~~~~a~~~~l 297 (415)
.. .+..++...++ .|+||.+ |+||+++++ ++++.+ ... ...+++.+++++.++.++|
T Consensus 283 ~~-~~~~~~~~~di---~t~sK~l-----~iG~~~~~~--------~~~~~l~~~~~~~~~~~~t~~~n~~~~~aa~aal 345 (449)
T 2cjg_A 283 AW-AYQQLDVAPDI---VAFGKKT-----QVCGVMAGR--------RVDEVADNVFAVPSRLNSTWGGNLTDMVRARRIL 345 (449)
T ss_dssp SS-THHHHTCCCSE---EEECGGG-----SSEEEEECG--------GGGGSTTCTTTSTTSSCCSSSSCHHHHHHHHHHH
T ss_pred ce-eecccCCCceE---EEecCcc-----cEEEEEECH--------HHhhhhhhcccCCcccccCCCCCHHHHHHHHHHH
Confidence 21 22222222223 3789996 799999865 344431 111 2234667889999998888
Q ss_pred CCCcHHHHHHHHHHHHHHHHHHHHHhhc----CCC-CcCCCCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEE
Q 014936 298 QQPDEVFFKKTLNLLKQSVDICYNKIKE----IPC-ISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIIL 372 (415)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~----~~~-~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~ 372 (415)
+...+ +...++++++++++.+.|++ +|. +. . .+..|.|++++++.. .+..++...++ ++||.+.
T Consensus 346 ~~~~~---~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~-~-~~~~g~~~~~~~~~~-----~~~~~~~~~l~-~~Gv~v~ 414 (449)
T 2cjg_A 346 EVIEA---EGLFERAVQHGKYLRARLDELAADFPAVVL-D-PRGRGLMCAFSLPTT-----ADRDELIRQLW-QRAVIVL 414 (449)
T ss_dssp HHHHH---HTHHHHHHHHHHHHHHHHHHHHHHSTTTSE-E-EEEETTEEEEECSSH-----HHHHHHHHHHH-HTTEECE
T ss_pred HHHHh---ccHHHHHHHHHHHHHHHHHHHHhhCCCcee-e-EeeccEEEEEEECCh-----HHHHHHHHHHH-HCCeEEe
Confidence 64211 34567777788888887775 343 43 2 234466777777531 12456777775 5799999
Q ss_pred cCCCCCCCCeEEEEe--eCChhhHHHHHHHHHHHHHHH
Q 014936 373 PGTAVGLKNWLRVTF--AVDPYSLEECLDRIKSFYQRH 408 (415)
Q Consensus 373 ~g~~~~~~~~iRi~~--~~~~~~l~~~l~~l~~~~~~~ 408 (415)
|+. .+++|+++ ..+++++++++++|+++++++
T Consensus 415 ~~g----~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~~ 448 (449)
T 2cjg_A 415 PAG----ADTVRFRPPLTVSTAEIDAAIAAVRSALPVV 448 (449)
T ss_dssp EET----TTEEEECCCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred cCC----CCEEEEECCCCCCHHHHHHHHHHHHHHHHHh
Confidence 874 48999977 478999999999999988653
No 187
>2cb1_A O-acetyl homoserine sulfhydrylase; PLP enzyme, lyase, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: LLP; 2.0A {Thermus thermophilus}
Probab=99.96 E-value=5.1e-27 Score=223.07 Aligned_cols=307 Identities=17% Similarity=0.132 Sum_probs=213.5
Q ss_pred CCCcHHHHHHHHHHHhcCCCCCCCCC--CCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEE
Q 014936 51 FHTTHVATEAVAEALLSEKFNGYAPT--AGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANIL 128 (415)
Q Consensus 51 ~~~~~~~~~a~~~~~~~~~~~~y~~~--~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi 128 (415)
++.++.+.+++. .. ..+.|+.. ....++++.++++++ .+++++++|+++++..++.++.++||+|+
T Consensus 32 ~~~~~~~~~~~~---~~-~~~~y~~~~~~~~~~l~~~la~~~g--------~~~~~~~~~gt~a~~~al~~l~~~gd~vi 99 (412)
T 2cb1_A 32 FKTLEEGQERFA---TG-EGYVYARQKDPTAKALEERLKALEG--------ALEAVVLASGQAATFAALLALLRPGDEVV 99 (412)
T ss_dssp CSSHHHHHHHHH---HC-CSCSBTTTCCHHHHHHHHHHHHHHT--------CSEEEEESSHHHHHHHHHHTTCCTTCEEE
T ss_pred cCChHHHHHHhc---cc-cCcCcCCCCChHHHHHHHHHHHHhC--------CCcEEEECCHHHHHHHHHHHHhCCCCEEE
Confidence 555666666553 22 22355543 457889999999882 34899999999999999999999999999
Q ss_pred EcCCCCcchHHH----HHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhh
Q 014936 129 LPRPGFPIYELS----AAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANK 204 (415)
Q Consensus 129 ~~~p~y~~~~~~----~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~ 204 (415)
++.|+|++.... ++..|.++..++. |+++|++++++++++|++++|+||||.+.+ +++|+++|++
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~--------~~~~l~~~i~~~~~~v~~~~~~n~~G~~~~---l~~i~~l~~~ 168 (412)
T 2cb1_A 100 AAKGLFGQTIGLFGQVLSLMGVTVRYVDP--------EPEAVREALSAKTRAVFVETVANPALLVPD---LEALATLAEE 168 (412)
T ss_dssp EETTCCHHHHHHHHHTTTTTTCEEEEECS--------SHHHHHHHCCTTEEEEEEESSCTTTCCCCC---HHHHHHHHHH
T ss_pred EeCCCchhHHHHHHHHHHHcCCEEEEECC--------CHHHHHHHhccCCeEEEEeCCCCCCccccc---HHHHHHHHHH
Confidence 999999876654 3457888888764 489999999989999999999999999975 8888999999
Q ss_pred cCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCC------C------------
Q 014936 205 LKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGM------F------------ 266 (415)
Q Consensus 205 ~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~------~------------ 266 (415)
+|+++|+|++|+.+.+.. .+. .. +..+++.|+||.++.+|.|+|++++.++... .
T Consensus 169 ~~~~li~D~~~~~~~~~~---~~~-~~---~~di~~~S~~K~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 241 (412)
T 2cb1_A 169 AGVALVVDNTFGAAGALC---RPL-AW---GAHVVVESLTKWASGHGSVLGGAVLSRETELWRNYPQFLQPDLKGQIPWE 241 (412)
T ss_dssp HTCEEEEECGGGTTTTSC---CGG-GG---TCSEEEEETTTTTTCSSCCCCEEEEECCCSGGGGSGGGGCC-------HH
T ss_pred cCCEEEEECCCccccccC---Ccc-cc---CCeEEEECCcccccCCCCcEEEEEEeccccccccccccccccccccchhh
Confidence 999999999998752211 111 12 2348899999999999999999988663210 0
Q ss_pred --ChHHHHHHHHhhc-c-ccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCC-------
Q 014936 267 --RKPKVVERMKKYF-D-ILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKP------- 335 (415)
Q Consensus 267 --~~~~~~~~~~~~~-~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p------- 335 (415)
...++.+.++... . .....++....++...++. ++.+.++..++.+.+.+.|.+.+++..+..|
T Consensus 242 ~~~~~~~~~~~r~~~~~~~g~~~~~~~a~~~~~~l~~-----l~~~~~~~~~~~~~l~~~L~~~~~v~~v~~p~~~~~p~ 316 (412)
T 2cb1_A 242 ALRARCFPERVRTLGLSLCGMALSPFNAYLLFQGLET-----VALRVARMSETARFLAERLQGHPKVKALRYPGLPEDPA 316 (412)
T ss_dssp HHGGGHHHHHHHHHHTTTTCCCCCHHHHHHHHHHGGG-----HHHHHHHHHHHHHHHHHHHHTCTTCSEEECTTSTTCTT
T ss_pred ccchHHHHHHHHHHHHHhcCCCCChHHhHHHHcCCch-----HHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCcc
Confidence 0003444454432 1 1223345555554445543 4556666778889999999988777633223
Q ss_pred ---------CCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCC---------CCC----------------C-C
Q 014936 336 ---------EGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGT---------AVG----------------L-K 380 (415)
Q Consensus 336 ---------~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~---------~~~----------------~-~ 380 (415)
..+.++.+.+ . +... +...+.+.||.+ .++ .|. . +
T Consensus 317 ~~~~~~~~~~~~~iv~~~~-~-------~~~~-~~~~l~~~~i~~-~~s~g~~~sl~~~~~~~~~~~~~~~~~~~~g~~~ 386 (412)
T 2cb1_A 317 HRNARKYLASGGPILTLDL-G-------DLER-ASRFLGAIRLLK-AANLGDARTLLVHPWTTTHSRLKEEARLQAGVTP 386 (412)
T ss_dssp HHHHHHHCSSSCSEEEEEC-S-------SHHH-HHHHHHHCSSEE-CSCCSCSSCEEECTTTTTTTTSCHHHHHHTTCCT
T ss_pred HHHHHHhCCCCceEEEEEe-C-------CHHH-HHHHHHhCCeee-ecccCCCcceeecCcccccccCCHHHHHhcCCCC
Confidence 2344666666 2 2333 455567789998 764 221 0 5
Q ss_pred CeEEEEeeC--ChhhHHHHHHHHH
Q 014936 381 NWLRVTFAV--DPYSLEECLDRIK 402 (415)
Q Consensus 381 ~~iRi~~~~--~~~~l~~~l~~l~ 402 (415)
+.||+|++. ++++++.+.+.|+
T Consensus 387 ~~iR~s~g~~~~~~~i~~l~~al~ 410 (412)
T 2cb1_A 387 GLVRVSVGLEDPLDLLALFEEALE 410 (412)
T ss_dssp TEEEEECCSSCHHHHHHHHHHHHH
T ss_pred CeEEEEeccCCHHHHHHHHHHHHh
Confidence 789999963 4567776666664
No 188
>3gbx_A Serine hydroxymethyltransferase; structural genomics, IDP01011, serine hydroxymethyltransfera salmonella typhimurium.; HET: MSE; 1.80A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1dfo_A* 3g8m_A* 1eqb_A*
Probab=99.96 E-value=2.1e-28 Score=233.54 Aligned_cols=326 Identities=12% Similarity=0.059 Sum_probs=206.1
Q ss_pred CcHHHHHHHHHHHhcCCCCCC------CCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCE
Q 014936 53 TTHVATEAVAEALLSEKFNGY------APTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGAN 126 (415)
Q Consensus 53 ~~~~~~~a~~~~~~~~~~~~y------~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~ 126 (415)
.+|.+++++.+.+.......| +.......+++...+++.+..| +++++|++++| ++++..++.++.++||+
T Consensus 42 ~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~--~~~~~v~~~sG-s~a~~~a~~~~~~~gd~ 118 (420)
T 3gbx_A 42 TSPRVMQAQGSQLTNKYAEGYPGKRYYGGCEYVDVVEQLAIDRAKELFG--ADYANVQPHSG-SQANFAVYTALLQPGDT 118 (420)
T ss_dssp CCHHHHHHHTSGGGGCCC--------------CHHHHHHHHHHHHHHHT--CSEEECCCSSH-HHHHHHHHHHHCCTTCE
T ss_pred CCHHHHHHHHHHHhcccccCCCCccccCchHHHHHHHHHHHHHHHHHhC--CCCceeEecCc-HHHHHHHHHHhcCCCCE
Confidence 589999999888743221122 2222333444433333333333 45556656555 88999999999999999
Q ss_pred EEEcCCCCcchH---HHHHhCC--CeEEEeeccCCCCCCCChhHHHhhcCC-CceEEEecCCCCccccCCCHHHHHHHHH
Q 014936 127 ILLPRPGFPIYE---LSAAFRH--IEVRHFDLLPDKGWEVDLDDIESLADQ-NTVALVIINPGNPCGNVYSYQHLQKLAE 200 (415)
Q Consensus 127 vi~~~p~y~~~~---~~~~~~g--~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~v~i~~p~nptG~~~~~~~l~~i~~ 200 (415)
|+++.|+|..+. ......| .....++.+ .++.+|+++|++++++ +++++++++|+||+ .. ++++|++
T Consensus 119 v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~~d~~~l~~~i~~~~~~~v~~~~~~~~~--~~---~l~~l~~ 191 (420)
T 3gbx_A 119 VLGMNLAQGGHLTHGSPVNFSGKLYNIVPYGID--ESGKIDYDEMAKLAKEHKPKMIIGGFSAYSG--VV---DWAKMRE 191 (420)
T ss_dssp EEEEEEC------------CHHHHSEEEEEEEC--TTCSCCHHHHHHHHHHHCCSEEEECCTTCCS--CC---CHHHHHH
T ss_pred EEecchhhcceeccchhhhhcccceeEEeccCC--ccCCcCHHHHHHHHHhcCCeEEEEecCccCC--cc---CHHHHHH
Confidence 999999998743 2212233 344444443 4567899999999876 58899998999874 43 3889999
Q ss_pred HHhhcCcEEEEccccCCccc-CCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhhc
Q 014936 201 TANKLKTLVIADEVYGHLVF-GDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYF 279 (415)
Q Consensus 201 ~~~~~~~~li~De~~~~~~~-~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~ 279 (415)
+|++||+++|+||+|..+.. .+.....+. . ..+++.|+||+++ |.+.||+++++.- .++.+.++...
T Consensus 192 l~~~~~~~li~De~~~~~~~~~~~~~~~~~---~--~di~~~s~sK~~~--g~~gg~~~~~~~~-----~~~~~~~~~~~ 259 (420)
T 3gbx_A 192 IADSIGAYLFVDMAHVAGLIAAGVYPNPVP---H--AHVVTTTTHKTLA--GPRGGLILAKGGD-----EELYKKLNSAV 259 (420)
T ss_dssp HHHHTTCEEEEECTTTHHHHHTTSSCCSTT---T--SSEEEEESSGGGC--SCSCEEEEESSCC-----HHHHHHHHHHH
T ss_pred HHHHcCCEEEEECCcchhceecccCCcccc---c--CCEEEeecccCCC--CCCceEEEEcCCc-----HHHHHHhhhhc
Confidence 99999999999999865432 222121211 1 2388999999974 4556999886410 13556665543
Q ss_pred cc--cCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCccccCCCCCHH
Q 014936 280 DI--LGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLDDIIDDI 357 (415)
Q Consensus 280 ~~--~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~~~~~~~~ 357 (415)
.. ..+++...+.++..++....+.++++..++++++++++.+.|++. ++.++..+..++++|+.++... ...
T Consensus 260 ~~~~~~~~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~-----~~~ 333 (420)
T 3gbx_A 260 FPSAQGGPLMHVIAGKAVALKEAMEPEFKVYQQQVAKNAKAMVEVFLNR-GYKVVSGGTENHLFLLDLVDKN-----LTG 333 (420)
T ss_dssp C----CCCCHHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHHHT-TCEEGGGSCSSSEEEEECGGGT-----CCH
T ss_pred CCCCCCCcchhHHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHhc-CCeeccCCCCCeEEEEEcCCCC-----CCH
Confidence 21 123444444444434433223667888999999999999999885 7773322356788888775321 123
Q ss_pred HHHHHHHhhcCeEEEc-------CCCCCCCCeEEEEee------CChhhHHHHHHHHHHHHHH
Q 014936 358 DFCFKLAKEESVIILP-------GTAVGLKNWLRVTFA------VDPYSLEECLDRIKSFYQR 407 (415)
Q Consensus 358 ~~~~~ll~~~gi~v~~-------g~~~~~~~~iRi~~~------~~~~~l~~~l~~l~~~~~~ 407 (415)
+.+...++++||.+.| +..|+ ...+||++. .++++++.+++.|++++++
T Consensus 334 ~~~~~~l~~~gi~v~~~~~~~~~~~~~~-~~~iRi~~~~~~~~~~~~~~i~~~~~~l~~~l~~ 395 (420)
T 3gbx_A 334 KEADAALGRANITVNKNSVPNDPKSPFV-TSGIRIGSPAVTRRGFKEAEVKELAGWMCDVLDN 395 (420)
T ss_dssp HHHHHHHHHTTEECEEECCTTCSSCTTT-CSEEEEECHHHHHTTCCHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHCCcEeccccCCCCccccCC-CcceEEecchhcccCCCHHHHHHHHHHHHHHHhC
Confidence 4455556788999998 33333 356999993 3578999999999888754
No 189
>3nyt_A Aminotransferase WBPE; PLP binding, nucleotide-sugar binding; HET: ULP; 1.30A {Pseudomonas aeruginosa} PDB: 3nys_A* 3nyu_A* 3nu8_A* 3nu7_A* 3nub_A*
Probab=99.96 E-value=4.7e-28 Score=226.85 Aligned_cols=304 Identities=14% Similarity=0.171 Sum_probs=220.2
Q ss_pred CcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHh-cCCCCEEEEcC
Q 014936 53 TTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALL-SRPGANILLPR 131 (415)
Q Consensus 53 ~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l-~~~gd~vi~~~ 131 (415)
..+++++++.+.+..+ .|.+..+..++|+.++++++ .+++++++||++++..++.++ .++||+|+++.
T Consensus 14 ~~~~v~~a~~~~~~~~---~~~~~~~~~~l~~~la~~~~--------~~~~~~~~sGt~al~~al~~~~~~~gd~Vi~~~ 82 (367)
T 3nyt_A 14 IKDKIDAGIQRVLRHG---QYILGPEVTELEDRLADFVG--------AKYCISCANGTDALQIVQMALGVGPGDEVITPG 82 (367)
T ss_dssp HHHHHHHHHHHHHHHC---CCSSCHHHHHHHHHHHHHHT--------CSEEEEESCHHHHHHHHHHHTTCCTTCEEEEES
T ss_pred cCHHHHHHHHHHHhcC---CccCChHHHHHHHHHHHHhC--------CCcEEEeCCHHHHHHHHHHHhCCCCcCEEEECC
Confidence 4578888888887653 34455678999999999983 348999999999999999999 79999999999
Q ss_pred CCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEE
Q 014936 132 PGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIA 211 (415)
Q Consensus 132 p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~ 211 (415)
++|+++...+...|++++.++++++ .+.+|++++++++++++++|+ |+||+|.. .++++|.++|+++|+++|+
T Consensus 83 ~~~~~~~~~~~~~G~~~~~~~~~~~-~~~~d~~~l~~~i~~~~~~v~---~~~~~G~~---~~~~~i~~la~~~~~~li~ 155 (367)
T 3nyt_A 83 FTYVATAETVALLGAKPVYVDIDPR-TYNLDPQLLEAAITPRTKAII---PVSLYGQC---ADFDAINAIASKYGIPVIE 155 (367)
T ss_dssp SSCTHHHHHHHHTTCEEEEECBCTT-TCSBCGGGTGGGCCTTEEEEC---CBCGGGCC---CCHHHHHHHHHHTTCCBEE
T ss_pred CccHHHHHHHHHcCCEEEEEecCCc-cCCcCHHHHHHhcCcCCcEEE---eeCCccCh---hhHHHHHHHHHHcCCEEEE
Confidence 9999999999999999999998653 467999999999988888766 78899977 5688888899999999999
Q ss_pred ccccCCcc-cCCCCcccccccCCCCCeEEEccC--ccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhhcc--------
Q 014936 212 DEVYGHLV-FGDKPFVPMGVFGSTVPILTLGSL--SKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFD-------- 280 (415)
Q Consensus 212 De~~~~~~-~~~~~~~~~~~~~~~~~~i~~~s~--sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-------- 280 (415)
|++|+.+. +.+.. +..++ .+.+.|| +|.++.+|. .|++++++ +++.+.++....
T Consensus 156 D~a~~~g~~~~~~~---~~~~~----di~~~Sf~~~K~l~~~g~-gg~~~~~~-------~~l~~~~~~~~~~g~~~~~~ 220 (367)
T 3nyt_A 156 DAAQSFGASYKGKR---SCNLS----TVACTSFFPSAPLGCYGD-GGAIFTND-------DELATAIRQIARHGQDRRYH 220 (367)
T ss_dssp ECTTTTTCEETTEE---TTSSS----SEEEEECCTTSSSCCSSC-CEEEEESC-------HHHHHHHHHHTBTTEEETTE
T ss_pred ECccccCCeECCee---ccCCC----CEEEEECCCCCcCCCcCc-eeEEEeCC-------HHHHHHHHHHHhcCCCcCce
Confidence 99998643 33221 22222 2777886 899876566 78888854 357666665432
Q ss_pred -----ccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCc----eEEEEecCccccC
Q 014936 281 -----ILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGS----MAVMLKLNLSLLD 351 (415)
Q Consensus 281 -----~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g----~~~~~~l~~~~~~ 351 (415)
.+...++....++...++. +++..++.+++++++.+.|+++ ++.....+.++ ..+++.++
T Consensus 221 ~~~~g~~~~~~~~~aa~~~~~l~~-----~~~~~~~~~~~~~~~~~~L~~~-~~~~~~~~~~~~~~~~~~~~~~~----- 289 (367)
T 3nyt_A 221 HIRVGVNSRLDTLQAAILLPKLEI-----FEEEIALRQKVAAEYDLSLKQV-GIGTPFIEVNNISVYAQYTVRMD----- 289 (367)
T ss_dssp ECSCCCBCCCCHHHHHHHHHHHHT-----HHHHHHHHHHHHHHHHHHHHHT-TCCCCCCCTTEECCCSSEEEECS-----
T ss_pred eeccCcCCCccHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHhccC-CeeccCCCCCCceeeEEEEEEeC-----
Confidence 1344566666666555543 5666677778888888888877 44422122221 12333332
Q ss_pred CCCCHHHHHHHHHhhcCeEEEcCCC--------CC-C-----------CCeEEEEee--CChhhHHHHHHHHHHH
Q 014936 352 DIIDDIDFCFKLAKEESVIILPGTA--------VG-L-----------KNWLRVTFA--VDPYSLEECLDRIKSF 404 (415)
Q Consensus 352 ~~~~~~~~~~~ll~~~gi~v~~g~~--------~~-~-----------~~~iRi~~~--~~~~~l~~~l~~l~~~ 404 (415)
+..++...| +++||.+.++.. |. . ...+|+++. .+++|++..++.|++.
T Consensus 290 ---~~~~l~~~L-~~~GI~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~lp~~~~~t~~~i~~v~~~~~~~ 360 (367)
T 3nyt_A 290 ---NRESVQASL-KAAGVPTAVHYPIPLNKQPAVADEKAKLPVGDKAATQVMSLPMHPYLDTASIKIICAALTNL 360 (367)
T ss_dssp ---SHHHHHHHH-HHHTCCCBCSCSSCGGGSGGGCCTTCCCHHHHHHHHHEEEECCCTTCCHHHHHHHHHHHHC-
T ss_pred ---CHHHHHHHH-HHCCCceeccCCCccccChhhhccCCCChHHHHHHhCeEEccCCCCCCHHHHHHHHHHHHHH
Confidence 345555554 667999877643 11 0 346899984 6899999999988754
No 190
>1pff_A Methionine gamma-lyase; homocysteine; 2.50A {Trichomonas vaginalis} SCOP: c.67.1.3
Probab=99.96 E-value=5.3e-27 Score=216.60 Aligned_cols=276 Identities=13% Similarity=0.075 Sum_probs=194.8
Q ss_pred HHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHH----HhCCCeEEEeeccCC
Q 014936 81 LTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSA----AFRHIEVRHFDLLPD 156 (415)
Q Consensus 81 ~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~----~~~g~~~~~~~~~~~ 156 (415)
++++.+|++++ .+ +.+++++|++++..++.++.++||+|+++.|+|+++...+ +..|.++..++.
T Consensus 2 ~l~~~la~~~g------~~--~~i~~~sG~~a~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~--- 70 (331)
T 1pff_A 2 ALEGKIAKLEH------AE--ACAATASGMGAIAASVWTFLKAGDHLISDDCLYGCTHALFEHQLRKFGVEVDFIDM--- 70 (331)
T ss_dssp HHHHHHHHHHT------CS--EEEEESSHHHHHHHHHHHHCCTTCEEEEESCCCHHHHHHHHTHHHHTTCEEEEECT---
T ss_pred hHHHHHHHHhC------CC--eEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCcchHHHHHHHHHHhcCCEEEEeCC---
Confidence 68999999983 33 4555555589999999999999999999999999877664 458999888865
Q ss_pred CCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhh-cCcEEEEccccCCcccCCCCcccccccCCCC
Q 014936 157 KGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANK-LKTLVIADEVYGHLVFGDKPFVPMGVFGSTV 235 (415)
Q Consensus 157 ~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~-~~~~li~De~~~~~~~~~~~~~~~~~~~~~~ 235 (415)
.|++++++.++++++++++++|+||||.+++ +++|.++|++ +|+++|+|++|+.+.+. .++ .. +
T Consensus 71 ----~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~---~~~i~~~~~~~~~~~li~D~a~~~~~~~----~~~-~~---~ 135 (331)
T 1pff_A 71 ----AVPGNIEKHLKPNTRIVYFETPANPTLKVID---IEDAVKQARKQKDILVIVDNTFASPILT----NPL-DL---G 135 (331)
T ss_dssp ----TSTTHHHHTCCTTEEEEEEESSCTTTCCCCC---HHHHHHHHTTSSSCEEEEECTTTHHHHC----CGG-GG---T
T ss_pred ----CCHHHHHHhhcCCCeEEEEECCCCCcCcccC---HHHHHHHHhhhcCCEEEEECCCcccccC----Chh-hc---C
Confidence 4789999999888999999999999999985 8888999999 99999999999875542 122 22 3
Q ss_pred CeEEEccCccccCCCCce-EEEEEeeCCCCCCChHHHHHHHHhhccc--cCCchhHHHHHHHHhhCCCcHHHHHHHHHHH
Q 014936 236 PILTLGSLSKRWIVPGWR-LGWFVTTDPCGMFRKPKVVERMKKYFDI--LGDPATFIQAAVPSILQQPDEVFFKKTLNLL 312 (415)
Q Consensus 236 ~~i~~~s~sK~~~~~G~r-~G~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~ 312 (415)
..+++.|+||.|+.+|.| +||+++++ +++.+.++..... +.+.++..+.++...++. +..+.+..
T Consensus 136 ~d~~~~s~~K~~~~~~~r~~G~~~~~~-------~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~-----~~~~~~~~ 203 (331)
T 1pff_A 136 VDIVVHSATKYINGHTDVVAGLVCSRA-------DIIAKVKSQGIKDITGAIISPHDAWLITRGTLT-----LDMRVKRA 203 (331)
T ss_dssp CSEEEEETTTTTSSSSSCCCEEEEECH-------HHHHHHHHTCCCCCCCCCCCHHHHHHHHHHHHH-----HHHHHHHH
T ss_pred CcEEEEECccccCCCCCceEEEEEeCc-------HHHHHHHHHHHHhhcCCCCCHHHHHHHHcCcch-----HHHHHHHH
Confidence 458999999999999999 79998853 2577777766443 446777777776666642 33334444
Q ss_pred HHHHHHHHHHhhcC--------------CCCcCCC--CCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCC
Q 014936 313 KQSVDICYNKIKEI--------------PCISCPH--KPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTA 376 (415)
Q Consensus 313 ~~~~~~l~~~l~~~--------------~~~~~~~--~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~ 376 (415)
.++.+.+.+.+++. |++..+. ....+.++.+.++ +..+ +...+.+.||.+.+.+.
T Consensus 204 ~~~~~~~~~~l~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~-~~~~l~~~gI~~~~~s~ 274 (331)
T 1pff_A 204 AENAQKVAEFLHEHKAVKKVYYPGLPDHPGHEIAKKQMKMFGSMIAFDVD--------GLEK-AKKVLDNCHVVSLAVSL 274 (331)
T ss_dssp HHHHHHHHHHHHHCTTCCCEECTTSTTSTTHHHHHHHCSSCCSEEEEECS--------SHHH-HHHHHHTCSSSEECSSC
T ss_pred HHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCceEEEEEEC--------CHHH-HHHHHHhCCCceeccCC
Confidence 44555555444432 2222100 0123556666664 2333 45556788998765421
Q ss_pred -------------------------CCC-CCeEEEEeeC--ChhhHHHHHHHHHH
Q 014936 377 -------------------------VGL-KNWLRVTFAV--DPYSLEECLDRIKS 403 (415)
Q Consensus 377 -------------------------~~~-~~~iRi~~~~--~~~~l~~~l~~l~~ 403 (415)
++. ++++|++++. ++++++.+++.|++
T Consensus 275 g~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iRis~~~~~t~~~i~~l~~~l~~ 329 (331)
T 1pff_A 275 GGPESLIQHPASMTHAGVPKEEREAAGLTDNLIRLSVGCENVQDIIDDLKQALDL 329 (331)
T ss_dssp CSSSCEEECHHHHTSTTSCHHHHHHTTCCTTEEEEECCSSCHHHHHHHHHHHHHT
T ss_pred CCcceeeecchhhcccccCHHHHHhcCCCCCeEEEEEecCCHHHHHHHHHHHHHH
Confidence 122 5799999963 56777777777654
No 191
>1qgn_A Protein (cystathionine gamma-synthase); methionine biosynthesis, pyridoxal 5'-phosphate, gamma-famil; HET: PLP; 2.90A {Nicotiana tabacum} SCOP: c.67.1.3 PDB: 1i41_A* 1i48_A* 1i43_A*
Probab=99.96 E-value=5e-27 Score=223.36 Aligned_cols=284 Identities=13% Similarity=0.103 Sum_probs=203.9
Q ss_pred CcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHH----HHhCCCeEEEeec
Q 014936 78 GLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELS----AAFRHIEVRHFDL 153 (415)
Q Consensus 78 g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~----~~~~g~~~~~~~~ 153 (415)
...++|+.++++++ .. +.+++++|++++..++.+++++||+|+++.++|+++... ++..|+++..++.
T Consensus 115 ~~~~l~~~lA~l~g------~~--~~v~~~sG~~Ai~~al~~l~~~Gd~Vi~~~~~y~~~~~~~~~~~~~~G~~v~~v~~ 186 (445)
T 1qgn_A 115 TTVVLEEKISALEG------AE--STLLMASGMCASTVMLLALVPAGGHIVTTTDCYRKTRIFIETILPKMGITATVIDP 186 (445)
T ss_dssp HHHHHHHHHHHHHT------CS--EEEEESCHHHHHHHHHHHHSCSSCEEEEETTSCHHHHHHHHHTGGGGTCEEEEECS
T ss_pred HHHHHHHHHHHHhC------CC--cEEEeCCHHHHHHHHHHHHhCCCCEEEEcCCCchhHHHHHHHHHHHcCCEEEEeCC
Confidence 45689999999873 22 445555556999999999999999999999999987664 4567999988875
Q ss_pred cCCCCCCCChhHHHhhcCCCc-eEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccC
Q 014936 154 LPDKGWEVDLDDIESLADQNT-VALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFG 232 (415)
Q Consensus 154 ~~~~~~~~~~~~l~~~~~~~~-~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~ 232 (415)
+ |++++++++++++ ++|++++|+||||.+.+ +++|+++|+++|+++|+|++|+.+... .++ .++
T Consensus 187 ~-------d~~~l~~ai~~~tv~lV~le~p~NptG~v~d---l~~I~~la~~~g~~livD~a~~~~~~~----~~~-~~g 251 (445)
T 1qgn_A 187 A-------DVGALELALNQKKVNLFFTESPTNPFLRCVD---IELVSKLCHEKGALVCIDGTFATPLNQ----KAL-ALG 251 (445)
T ss_dssp S-------CHHHHHHHHHHSCEEEEEEESSCTTTCCCCC---HHHHHHHHHHTTCEEEEECTTTCTTTC----CTT-TTT
T ss_pred C-------CHHHHHHHhccCCCCEEEEeCCCCCCCcccC---HHHHHHHHHHcCCEEEEECCCcccccC----Ccc-ccC
Confidence 2 7999999998888 99999999999999976 678888999999999999999864321 111 222
Q ss_pred CCCCeEEEccCccccCCCC-ceEEEEEeeCCCCCCChHHHHHHHHhhcc-ccCCchhHHHHHHHHhhCCCcHHHHHHHHH
Q 014936 233 STVPILTLGSLSKRWIVPG-WRLGWFVTTDPCGMFRKPKVVERMKKYFD-ILGDPATFIQAAVPSILQQPDEVFFKKTLN 310 (415)
Q Consensus 233 ~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~ 310 (415)
. .+++.|+||.++..| .++||+++++ ++++.+..... .....++....++...++. +..+.+
T Consensus 252 ~---Div~~S~sK~~gg~gd~~~G~l~~~~--------~l~~~l~~~~~~~g~~~~~~~a~~~~~~l~~-----l~~r~~ 315 (445)
T 1qgn_A 252 A---DLVLHSATKFLGGHNDVLAGCISGPL--------KLVSEIRNLHHILGGALNPNAAYLIIRGMKT-----LHLRVQ 315 (445)
T ss_dssp C---SEEEECTTTTTTCSSSCCCEEEEECH--------HHHHHHHHHHHHHCCCCCHHHHHHHHHHGGG-----HHHHHH
T ss_pred C---EEEEECCcccccccccceEEEEEECH--------HHHHHHHHHHHHhCCCCCHHHHHHHHHhHHH-----HHHHHH
Confidence 2 388999999987665 4799999865 57777765433 2334566655555556643 555666
Q ss_pred HHHHHHHHHHHHhhcCCCCcCCCCC----------------CCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcC
Q 014936 311 LLKQSVDICYNKIKEIPCISCPHKP----------------EGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPG 374 (415)
Q Consensus 311 ~~~~~~~~l~~~l~~~~~~~~~~~p----------------~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g 374 (415)
+..++++.+.+.|++.|++..+.+| ..|.++++.++.. ......++.. ++..++.++.|
T Consensus 316 ~~~~~a~~l~~~L~~~p~v~~v~~p~l~~~p~~~~~~~~~~g~g~ivsf~l~~~----~~~~~~~l~~-l~~~~i~~s~G 390 (445)
T 1qgn_A 316 QQNSTALRMAEILEAHPKVRHVYYPGLQSHPEHHIAKKQMTGFGGAVSFEVDGD----LLTTAKFVDA-LKIPYIAPSFG 390 (445)
T ss_dssp HHHHHHHHHHHHHHTCTTEEEEECTTSSSSTTHHHHHHHCSCCCSEEEEEESSC----HHHHHHHHHH-CSSSEECSCCC
T ss_pred HHHHHHHHHHHHHhcCCCceEEECCCCCCCchHHHHHHhccCCCcEEEEEECCC----HHHHHHHHHh-CCCceEeccCC
Confidence 7777788899999888776223334 1466777777531 0012333333 23347777777
Q ss_pred CCCC----------------------C-CCeEEEEeeCChhhHHHHHHHHHHHHHH
Q 014936 375 TAVG----------------------L-KNWLRVTFAVDPYSLEECLDRIKSFYQR 407 (415)
Q Consensus 375 ~~~~----------------------~-~~~iRi~~~~~~~~l~~~l~~l~~~~~~ 407 (415)
+.+. . ++.||+|++ .|+++.+++.|++++++
T Consensus 391 ~~~sl~~~p~~~~h~~~~~~~~~~~g~~~~~iRlSvG--~Edid~li~~L~~al~~ 444 (445)
T 1qgn_A 391 GCESIVDQPAIMSYWDLSQSDRAKYGIMDNLVRFSFG--VEDFDDLKADILQALDS 444 (445)
T ss_dssp SSSCEEECHHHHHSTTSCHHHHHTTTCCSSEEEEECC--SSCHHHHHHHHHHHHHH
T ss_pred CCceeeecccccccccCCHHHHHhcCCCCCeEEEEec--cCCHHHHHHHHHHHHhh
Confidence 6542 1 478999998 46799999999888763
No 192
>3h7f_A Serine hydroxymethyltransferase 1; cytoplasm, one-carbon metabolism, pyridoxal phosphate, structural genomics; HET: LLP; 1.50A {Mycobacterium tuberculosis}
Probab=99.96 E-value=4.8e-28 Score=232.53 Aligned_cols=336 Identities=14% Similarity=0.080 Sum_probs=221.4
Q ss_pred ceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCC---CCCcHHHH--HHHH-HHHhhhCCCCCCCCcEEE-eCC
Q 014936 36 KVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAP---TAGLPLTR--RAIA-EYLSRDLPYKLTPNDVFV-TSG 108 (415)
Q Consensus 36 ~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~---~~g~~~lr--~~ia-~~~~~~~~~~~~~~~i~i-~~g 108 (415)
..++|..+. .+.+|.+++++.+.+.+.....|+. ..|...++ +.++ +++.+.+| ++ ...+ ++|
T Consensus 46 ~~i~l~~~~------~~~~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~~e~~a~~~la~~~g--~~--~~~v~~~s 115 (447)
T 3h7f_A 46 DTLEMIASE------NFVPRAVLQAQGSVLTNKYAEGLPGRRYYGGCEHVDVVENLARDRAKALFG--AE--FANVQPHS 115 (447)
T ss_dssp HSEECCTTC------CCCCHHHHHHHTSGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHHT--CS--EEECCCSS
T ss_pred CceeEecCC------CCCCHHHHHHHHHHhcCCccccCCcccccCccHHHHHHHHHHHHHHHHHcC--CC--ceEEEeCC
Confidence 568885543 2348999999988775322223332 12434433 3344 44444333 22 3444 888
Q ss_pred hHHHHHHHHHHhcCCCCEEEEcCCCCcchH-HH----HHhCCCeEEEeeccCCCCCCCChhHHHhhcC-CCceEEEecCC
Q 014936 109 CTQAIDVAMALLSRPGANILLPRPGFPIYE-LS----AAFRHIEVRHFDLLPDKGWEVDLDDIESLAD-QNTVALVIINP 182 (415)
Q Consensus 109 ~~~al~~~~~~l~~~gd~vi~~~p~y~~~~-~~----~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~v~i~~p 182 (415)
|++++..++.+++++||+|+++.|+|.++. .. ....+..+..+++++ .++.+|+++++++++ .+++++++++|
T Consensus 116 Gs~a~~~a~~~~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~~d~~~l~~~i~~~~~~~i~~~~~ 194 (447)
T 3h7f_A 116 GAQANAAVLHALMSPGERLLGLDLANGGHLTHGMRLNFSGKLYENGFYGVDP-ATHLIDMDAVRATALEFRPKVIIAGWS 194 (447)
T ss_dssp HHHHHHHHHHHHCCTTCEEEEECGGGTCCGGGTCTTSHHHHSSEEEEECCCT-TTCSCCHHHHHHHHHHHCCSEEEEECS
T ss_pred HHHHHHHHHHHhcCCCCEEEecCcccccccchhhhhhhcCCeeEEEEcCcCc-ccCCcCHHHHHHHHHhcCCeEEEEcCC
Confidence 899999999999999999999999997732 11 122344556666544 345789999999885 36788888899
Q ss_pred CCccccCCCHHHHHHHHHHHhhcCcEEEEccccCC-cccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeC
Q 014936 183 GNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGH-LVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTD 261 (415)
Q Consensus 183 ~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~-~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~ 261 (415)
+||++. ++++|.++|+++|+++|+||+|.. +.+.+....++ .. ..+++.|+||++ +|+|.||+++++
T Consensus 195 ~~~~~~-----~l~~i~~l~~~~g~lli~Dea~~~g~~~~g~~~~~~---~~--~di~~~s~sK~l--~G~~gG~i~~~~ 262 (447)
T 3h7f_A 195 AYPRVL-----DFAAFRSIADEVGAKLLVDMAHFAGLVAAGLHPSPV---PH--ADVVSTTVHKTL--GGGRSGLIVGKQ 262 (447)
T ss_dssp SCCSCC-----CHHHHHHHHHHHTCEEEEECTTTHHHHHTTSSCCST---TT--CSEEEEESSGGG--CCCSCEEEEECG
T ss_pred CCCCcc-----CHHHHHHHHHHcCCEEEEECCchhhhhcCCCCCCCC---CC--CcEEEecCCcCC--CCCCeEEEEECH
Confidence 999876 589999999999999999999754 33333322222 11 127789999985 478999999865
Q ss_pred CCCCCChHHHHHHHHhhcc--ccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcC----CCCcCCCCC
Q 014936 262 PCGMFRKPKVVERMKKYFD--ILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEI----PCISCPHKP 335 (415)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~----~~~~~~~~p 335 (415)
++.+.+..... ..++++...+.++..++....+.++++..+++.++++++.+.|++. +++..+..+
T Consensus 263 --------~~~~~l~~~~~~~~~~~~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~g~~~~~~~ 334 (447)
T 3h7f_A 263 --------QYAKAINSAVFPGQQGGPLMHVIAGKAVALKIAATPEFADRQRRTLSGARIIADRLMAPDVAKAGVSVVSGG 334 (447)
T ss_dssp --------GGHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHTSHHHHHTTCEEGGGS
T ss_pred --------HHHHHHhhhcCCcccCCccHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHhccccCCCeEEecCC
Confidence 46666655422 1233333334444444443333567888899999999999999875 467633234
Q ss_pred CCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEE----cCC--CCCCCCeEEEEee------CChhhHHHHHHHHHH
Q 014936 336 EGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIIL----PGT--AVGLKNWLRVTFA------VDPYSLEECLDRIKS 403 (415)
Q Consensus 336 ~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~----~g~--~~~~~~~iRi~~~------~~~~~l~~~l~~l~~ 403 (415)
..++++|+.+.... ...+.+..++++.||.+. |+. .+..++++|+++. .++++++++++.|.+
T Consensus 335 ~~~~~~~~~~~~~~-----~~~~~~~~~l~~~GI~v~~~~i~~~~~~p~~~~~lRig~~~~~~~~~~~eei~~~~~~l~~ 409 (447)
T 3h7f_A 335 TDVHLVLVDLRDSP-----LDGQAAEDLLHEVGITVNRNAVPNDPRPPMVTSGLRIGTPALATRGFGDTEFTEVADIIAT 409 (447)
T ss_dssp CSSSEEEEECTTSS-----CCHHHHHHHHHHTTEECBC-------------CEEEEECHHHHHHTCCHHHHHHHHHHHHH
T ss_pred CCCCEEEEEcCCCC-----CCHHHHHHHHHHCCeEEecccCCCCCCCCCCCCceeccCHHHhhCCCCHHHHHHHHHHHHH
Confidence 56778888775321 134556667788899998 652 2334678999982 578999999999998
Q ss_pred HHHH
Q 014936 404 FYQR 407 (415)
Q Consensus 404 ~~~~ 407 (415)
++.+
T Consensus 410 ~l~~ 413 (447)
T 3h7f_A 410 ALAT 413 (447)
T ss_dssp HHHS
T ss_pred HHhc
Confidence 8754
No 193
>3hbx_A GAD 1, glutamate decarboxylase 1; calmodulin-binding, lyase, pyridoxal phosphate; HET: LLP; 2.67A {Arabidopsis thaliana}
Probab=99.96 E-value=4.9e-27 Score=228.18 Aligned_cols=349 Identities=13% Similarity=0.056 Sum_probs=242.9
Q ss_pred CcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEE---EeCChH
Q 014936 34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVF---VTSGCT 110 (415)
Q Consensus 34 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~---i~~g~~ 110 (415)
+++.+++..-. ..++++.+.+++.+.+.... ..|....+..++++.+.+++++.+|.+..+++++ +|+|++
T Consensus 54 gnp~~~l~s~~-----t~~~~~~v~~~l~~~~~~~~-~~~~~~p~~~~le~~~~~~la~l~g~~~~~~~~~~g~~t~ggt 127 (502)
T 3hbx_A 54 GNPRLNLASFV-----TTWMEPECDKLIMSSINKNY-VDMDEYPVTTELQNRCVNMIAHLFNAPLEEAETAVGVGTVGSS 127 (502)
T ss_dssp CCGGGBTTCCS-----CCCCCHHHHHHHHHTTTCBT-TCTTTCHHHHHHHHHHHHHHHHHTTCCCCSSCCCEEEEESSHH
T ss_pred CCCCceecccc-----CCCCCHHHHHHHHHHhccCC-CChhcChhHHHHHHHHHHHHHHHhCCCcccccCCcceecCcHH
Confidence 55555554422 13457889999988876533 2344444567888888888888888665455554 599999
Q ss_pred HHHHHHHHHhcCC--------CC-----EEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEE
Q 014936 111 QAIDVAMALLSRP--------GA-----NILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVAL 177 (415)
Q Consensus 111 ~al~~~~~~l~~~--------gd-----~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v 177 (415)
+++.+++.++.++ |+ .|+++.++|..+...++..|++++.+++++ +++.+|+++|++++++++++|
T Consensus 128 ea~~~a~~a~~~~~~~~~~~~G~~~~~~~vi~~~~~h~s~~~~~~~~G~~~~~v~~~~-~~~~~d~~~l~~~i~~~t~~v 206 (502)
T 3hbx_A 128 EAIMLAGLAFKRKWQNKRKAEGKPVDKPNIVTGANVQVCWEKFARYFEVELKEVKLSE-GYYVMDPQQAVDMVDENTICV 206 (502)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCCCSCCEEEEETTCCHHHHHHHHHTTCEEEEECCBT-TBCSCCHHHHHHHCCTTEEEE
T ss_pred HHHHHHHHHHHHHHhHHHHhcCCCCCCcEEEEcCCchHHHHHHHHHcCceeEEEecCC-CcCcCCHHHHHHHHhhCCEEE
Confidence 9999998887654 76 999999999999999999999999999754 347799999999999999999
Q ss_pred EecCCCCccccCCCHHHHHHHHHHHhhc------CcEEEEccccCCccc---CCCCcccccccCCCCCeEEEccCccccC
Q 014936 178 VIINPGNPCGNVYSYQHLQKLAETANKL------KTLVIADEVYGHLVF---GDKPFVPMGVFGSTVPILTLGSLSKRWI 248 (415)
Q Consensus 178 ~i~~p~nptG~~~~~~~l~~i~~~~~~~------~~~li~De~~~~~~~---~~~~~~~~~~~~~~~~~i~~~s~sK~~~ 248 (415)
++++|+||||.+ .++++|.++|+++ |+++++|++|+++.. .+.....+. ...-.++..+.+|. +
T Consensus 207 ~~~~~~n~tG~~---~~l~~I~~ia~~~~~~~~~~~~l~VD~A~~~~~~p~~~~~~~~~~~---~~~~D~v~~s~hK~-l 279 (502)
T 3hbx_A 207 AAILGSTLNGEF---EDVKLLNDLLVEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFR---LPLVKSINVSGHKY-G 279 (502)
T ss_dssp EEEBSCTTTCCB---CCHHHHHHHHHHHHHHHCCCCCEEEECTTGGGTHHHHCTTCCCSTT---STTEEEEEEETTTT-T
T ss_pred EEecCCCCCCcc---cCHHHHHHHHHHhhhccCCCCeEEEECCccchhhhhhCcccccccC---CCCceEEEECcccc-c
Confidence 999999999999 5577778888888 999999999987642 222111111 11113666788997 6
Q ss_pred CCCceEEEEEeeCCCCCCChHHHHHHHHhhcc----------ccCCc---hhHHHHHHHHhhCCCcHHHHHHHHHHHHHH
Q 014936 249 VPGWRLGWFVTTDPCGMFRKPKVVERMKKYFD----------ILGDP---ATFIQAAVPSILQQPDEVFFKKTLNLLKQS 315 (415)
Q Consensus 249 ~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~---~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~ 315 (415)
.++.++||+++.++..+. +.+..... ...+. ....+.++...+. .+.+.++.++..++
T Consensus 280 ~~p~g~G~~~~~~~~~l~------~~~~~~~~yl~~~~~~~~~~~sr~~~~~~a~~~al~~lg---~~g~~~~~~~~~~~ 350 (502)
T 3hbx_A 280 LVYAGIGWVIWRNKEDLP------EELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLG---HEGYRNVMENCREN 350 (502)
T ss_dssp CCCSSCEEEEESSGGGSC------GGGCEEECSSSSCEEECCSCCSCBSHHHHHHHHHHHHHH---HHHHHHHHHHHHHH
T ss_pred CCCCCeEEEEEeCHHHhh------HHhccCcccccCCCCCccccCCchHHHHHHHHHHHHHHH---HHHHHHHHHHHHHH
Confidence 677789999886533111 11110000 00111 2333444444443 35678888999999
Q ss_pred HHHHHHHhhcCCCCcCCCCC-CCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCC---CCCeEEEEee--C
Q 014936 316 VDICYNKIKEIPCISCPHKP-EGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVG---LKNWLRVTFA--V 389 (415)
Q Consensus 316 ~~~l~~~l~~~~~~~~~~~p-~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~---~~~~iRi~~~--~ 389 (415)
++++.+.|+++++++++ .+ ....++.++++... + .+..++...| .+.||.+.....+. ...++||+++ +
T Consensus 351 a~~l~~~L~~~~~~~~~-~~~~~~~~v~f~~~~~~--~-~~~~~l~~~L-~~~Gi~v~~~~~p~~~~~~~~lRisv~~~~ 425 (502)
T 3hbx_A 351 MIVLREGLEKTERFNIV-SKDEGVPLVAFSLKDSS--C-HTEFEISDML-RRYGWIVPAYTMPPNAQHITVLRVVIREDF 425 (502)
T ss_dssp HHHHHHHHHTTTCEEEC-SCSSSSSEEEEEESSCS--S-CCHHHHHHHH-HTTTCBCCEEECCTTCTTCEEEEEECCTTC
T ss_pred HHHHHHHHHhCCCEEEE-eCCCCceEEEEEecCCC--c-CCHHHHHHHH-HhCCcEEeeccCCcccCCceEEEEEeCCCC
Confidence 99999999999778844 44 45567777775321 1 1344666665 56799864332221 2368999994 6
Q ss_pred ChhhHHHHHHHHHHHHHHHHH
Q 014936 390 DPYSLEECLDRIKSFYQRHAK 410 (415)
Q Consensus 390 ~~~~l~~~l~~l~~~~~~~~~ 410 (415)
+.++++.+++.|+++++++.+
T Consensus 426 t~edid~li~~L~~~l~~l~~ 446 (502)
T 3hbx_A 426 SRTLAERLVIDIEKVMRELDE 446 (502)
T ss_dssp CHHHHHHHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHHHHHHHh
Confidence 889999999999999887654
No 194
>2fyf_A PSAT, phosphoserine aminotransferase; PLP-dependent enzyme, dimer, structural genomics; HET: PLP; 1.50A {Mycobacterium tuberculosis} PDB: 3vom_A*
Probab=99.96 E-value=7e-28 Score=228.19 Aligned_cols=324 Identities=14% Similarity=0.070 Sum_probs=214.1
Q ss_pred cceeEecccCCCCCCCCCCcHHHHHHHHHHHhc--CCCCCCCCC-CCcHHHHHHHHHHHhhhCCCCCCCCcEEE-eCChH
Q 014936 35 KKVISLAMGDPTVHSCFHTTHVATEAVAEALLS--EKFNGYAPT-AGLPLTRRAIAEYLSRDLPYKLTPNDVFV-TSGCT 110 (415)
Q Consensus 35 ~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~--~~~~~y~~~-~g~~~lr~~ia~~~~~~~~~~~~~~~i~i-~~g~~ 110 (415)
+.+++|+.|. .++++.+++++.+.... +....|+.. ....++|+.+++++ |.. .+++|++ |+|++
T Consensus 39 ~~~~~~~~~~------~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~----g~~-~~~~i~~~t~g~t 107 (398)
T 2fyf_A 39 PRDGRFGSGP------SKVRLEQLQTLTTTAAALFGTSHRQAPVKNLVGRVRSGLAELF----SLP-DGYEVILGNGGAT 107 (398)
T ss_dssp CSSCBCCSSS------CCCCHHHHHGGGTTTTTTTTSCTTSHHHHHHHHHHHHHHHHHT----TCC-TTCEEEEEETCHH
T ss_pred cCCccccCCC------CCCCHHHHHHHhhcCCCccCcCcCCHHHHHHHHHHHHHHHHHh----CCC-CCceEEEeCCchh
Confidence 3456666553 45678898888763111 111122221 12345555555555 432 3468998 99999
Q ss_pred HHHHHHHHHhcCCCCEEEEcCCCCcc-hHHHHHhC--CCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccc
Q 014936 111 QAIDVAMALLSRPGANILLPRPGFPI-YELSAAFR--HIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCG 187 (415)
Q Consensus 111 ~al~~~~~~l~~~gd~vi~~~p~y~~-~~~~~~~~--g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG 187 (415)
+++.+++.++.++| .+++..+.|.. ....+... |.+++.++.+ +++..+. .+++++++|++++|+||||
T Consensus 108 ~al~~~~~~l~~~g-v~~v~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~g~~~~~-----~i~~~~~~v~~~~~~nptG 179 (398)
T 2fyf_A 108 AFWDAAAFGLIDKR-SLHLTYGEFSAKFASAVSKNPFVGEPIIITSD--PGSAPEP-----QTDPSVDVIAWAHNETSTG 179 (398)
T ss_dssp HHHHHHHHHTCSSC-EEEEECSHHHHHHHHHHHHCTTSCCCEEEECC--TTCCCCC-----CCCTTCSEEEEESEETTTT
T ss_pred HHHHHHHHHhcCCC-eEEEeCCHHHHHHHHHHHHhCCCCceEEEecC--CCCCCCc-----cccCCCCEEEEeCcCCCcc
Confidence 99999999998887 23333333321 12245555 7888888875 2332332 2566789999999999999
Q ss_pred cCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCC
Q 014936 188 NVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFR 267 (415)
Q Consensus 188 ~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~ 267 (415)
.+++.+++.++ +|+++|+|++|+.+... ..+.. ..+++.|+||+++++| ++||+++++
T Consensus 180 ~~~~~~~i~~~------~~~~vivD~a~~~~~~~----~~~~~-----~di~~~s~sK~~~~~g-g~g~l~~~~------ 237 (398)
T 2fyf_A 180 VAVAVRRPEGS------DDALVVIDATSGAGGLP----VDIAE-----TDAYYFAPQKNFASDG-GLWLAIMSP------ 237 (398)
T ss_dssp EECCCCCCTTC------C-CEEEEECTTTTTTSC----CCGGG-----CSEEEECTTSTTCSCS-SEEEEEECH------
T ss_pred eecchHHhhhh------cCCeEEEEeccccCCcc----cCccc-----CcEEEEecCcccCCCC-ceEEEEECH------
Confidence 99998877765 79999999999875421 12211 2378889999988875 599999865
Q ss_pred hHHHHHHHHhh----------------------ccccCCchhHHHHHHHHhhCCCcHHH-HHHHHHHHHHHHHHHHHHhh
Q 014936 268 KPKVVERMKKY----------------------FDILGDPATFIQAAVPSILQQPDEVF-FKKTLNLLKQSVDICYNKIK 324 (415)
Q Consensus 268 ~~~~~~~~~~~----------------------~~~~~~~~~~~~~a~~~~l~~~~~~~-~~~~~~~~~~~~~~l~~~l~ 324 (415)
++++.++.. .....+++...+.++..+|+...+.. +++..++++++++++.+.|+
T Consensus 238 --~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~l~~~L~ 315 (398)
T 2fyf_A 238 --AALSRIEAIAATGRWVPDFLSLPIAVENSLKNQTYNTPAIATLALLAEQIDWLVGNGGLDWAVKRTADSSQRLYSWAQ 315 (398)
T ss_dssp --HHHHHHHHHHHTTCCCCGGGCHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHH
T ss_pred --HHHHHhhcccccCCCCCcEEehHHHhhhcccCCCCCCCCHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHH
Confidence 566655321 01124566666777777775322222 78888999999999999999
Q ss_pred cCCCCcCCC-CC--CCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEee--CChhhHHHHHH
Q 014936 325 EIPCISCPH-KP--EGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFA--VDPYSLEECLD 399 (415)
Q Consensus 325 ~~~~~~~~~-~p--~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~--~~~~~l~~~l~ 399 (415)
++|++.++. .| .++.++|++++.. .+..++...+.+ +||.+.+|......+++||+++ +++++++.+++
T Consensus 316 ~~~g~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~l~~~L~~-~gI~v~~g~~~~~~~~iRis~~~~~t~e~i~~~~~ 389 (398)
T 2fyf_A 316 ERPYTTPFVTDPGLRSQVVGTIDFVDD-----VDAGTVAKILRA-NGIVDTEPYRKLGRNQLRVAMFPAVEPDDVSALTE 389 (398)
T ss_dssp HSTTEEESCCSGGGBCSSEEEEEECTT-----SCHHHHHHHHHH-TTCBCCSCCTTTCSSEEEEECCTTSCHHHHHHHHH
T ss_pred HcCCceeccCChhhcCCcEEEEECCCC-----CCHHHHHHHHHH-CCcEEecCcccCCCCEEEEEecCCCCHHHHHHHHH
Confidence 887877331 14 2344888888531 246677777654 5999988732222579999996 58999999999
Q ss_pred HHHHHHHH
Q 014936 400 RIKSFYQR 407 (415)
Q Consensus 400 ~l~~~~~~ 407 (415)
+|++++++
T Consensus 390 ~l~~~l~~ 397 (398)
T 2fyf_A 390 CVDWVVER 397 (398)
T ss_dssp HHHHHHHT
T ss_pred HHHHHHHh
Confidence 99988653
No 195
>3ri6_A O-acetylhomoserine sulfhydrylase; PYR 5'-phosphate, gamma-elimination, direct sulfhydrylation, CY metabolism, protein thiocarboxylate, TR; 2.20A {Wolinella succinogenes}
Probab=99.96 E-value=4.5e-27 Score=223.06 Aligned_cols=294 Identities=15% Similarity=0.082 Sum_probs=202.9
Q ss_pred CCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHH----HHHhCCCe
Q 014936 72 GYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYEL----SAAFRHIE 147 (415)
Q Consensus 72 ~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~----~~~~~g~~ 147 (415)
+|++ +...+|++.+|++++ .+..+++++|++|+..++.+++++||+|+++.|+|+++.. .+...|++
T Consensus 78 r~~~-p~~~~le~~lA~l~g--------~~~~v~~~sG~~Ai~~al~al~~~Gd~Vi~~~~~y~~~~~~~~~~~~~~G~~ 148 (430)
T 3ri6_A 78 RSSN-PTVEDLEQRLKNLTG--------ALGVLALGSGMAAISTAILTLARAGDSVVTTDRLFGHTLSLFQKTLPSFGIE 148 (430)
T ss_dssp --CC-HHHHHHHHHHHHHHT--------CSEEEEESCHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHHTHHHHTTCE
T ss_pred CCCC-HHHHHHHHHHHHHHC--------CCcEEEECCHHHHHHHHHHHHhCCCCEEEEcCCCchhHHHHHHHHHHHcCCE
Confidence 4444 467889999999882 3456777788899999999999999999999999998777 66788999
Q ss_pred EEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCccc
Q 014936 148 VRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVP 227 (415)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~ 227 (415)
+..++.+ |++++++++++++++|++++|+||+|.+.+ +++|+++|+++|+++|+|++|+...+. .+
T Consensus 149 ~~~v~~~-------d~~~l~~ai~~~t~~v~~e~p~NptG~~~d---l~~i~~la~~~g~~livD~a~~~~~~~----~~ 214 (430)
T 3ri6_A 149 VRFVDVM-------DSLAVEHACDETTKLLFLETISNPQLQVAD---LEALSKVVHAKGIPLVVDTTMTPPYLL----EA 214 (430)
T ss_dssp EEEECTT-------CHHHHHHHCCTTEEEEEEESSCTTTCCCCC---HHHHHHHHHTTTCCEEEECTTSCTTTC----CG
T ss_pred EEEeCCC-------CHHHHHHhhCCCCeEEEEECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCcccccC----Ch
Confidence 9988752 899999999999999999999999999975 678888899999999999999864431 11
Q ss_pred ccccCCCCCeEEEccCccccCCCCceEEEEEee-CCCCCC------------ChHHHHHHHHhh--ccccCCchhHHHHH
Q 014936 228 MGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTT-DPCGMF------------RKPKVVERMKKY--FDILGDPATFIQAA 292 (415)
Q Consensus 228 ~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~-~~~~~~------------~~~~~~~~~~~~--~~~~~~~~~~~~~a 292 (415)
..++. .+++.|+||.++.+|..+|.+++. +...+. +...+++..+.. .......++.....
T Consensus 215 -~~~g~---div~~S~sK~l~g~g~~~gG~vv~~~~~~~~~~~~~~~l~~~~g~~~~i~~~~~~~~~~~g~~~~~~~a~l 290 (430)
T 3ri6_A 215 -KRLGV---DIEVLSSTKFISGGGTSVGGVLIDHGLFEWKSLPSLAPYYAKAGPMAFLYKARKEVFQNLGPSLSPHNAYL 290 (430)
T ss_dssp -GGGTC---SEEEEECCCEEETTEEECCEEEEECSCSCGGGSTTTHHHHHHHGGGHHHHHHHHTHHHHHCCCCCHHHHHH
T ss_pred -HHcCC---EEEEECCcccccCCCCceEEEEEECChHHhhhccchhhhhhhhchhhHHHHHHHHHHHhcCCCCCHHHHHH
Confidence 12222 388999999988877666666552 221110 001122333221 12233445544444
Q ss_pred HHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCC----------------CceEEEEecCccccCCCCCH
Q 014936 293 VPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPE----------------GSMAVMLKLNLSLLDDIIDD 356 (415)
Q Consensus 293 ~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~----------------~g~~~~~~l~~~~~~~~~~~ 356 (415)
+...+ +.+..+.++..+++..+.+.|++.|++..+.+|. +|+.+|++++.. .+.
T Consensus 291 ~l~~l-----~~l~~r~~~~~~na~~la~~L~~~p~v~~V~~P~l~~~p~~~~~~~~~g~Gg~~lsf~l~~~-----~~~ 360 (430)
T 3ri6_A 291 QSLGL-----ETMALRIERSCQNAQELAHWLLSIPQVKCVNHPSLPDSPFYAIAKRQFRYAGSILTFELESK-----EAS 360 (430)
T ss_dssp HHHHH-----HHHHHHHHHHHHHHHHHHHHHTTCTTCEEEECTTSTTSTTHHHHHHHCSSCCSEEEEECSSH-----HHH
T ss_pred HHhhh-----hhHHHHHHHHHHHHHHHHHHHhCCCCccEEECCCCCCCccHHHHHHhCCCCceEEEEEECCH-----HHH
Confidence 44434 3466677888899999999999888877555565 454888888621 123
Q ss_pred HHHHHHHHhhcCeEEEcCCCCC-----------------------CCCeEEEEeeCChhhHHHHHHHHHHHH
Q 014936 357 IDFCFKLAKEESVIILPGTAVG-----------------------LKNWLRVTFAVDPYSLEECLDRIKSFY 405 (415)
Q Consensus 357 ~~~~~~ll~~~gi~v~~g~~~~-----------------------~~~~iRi~~~~~~~~l~~~l~~l~~~~ 405 (415)
.+++..+ +..++.+++|..+. .+++||+|++. |+.+.+++.|++++
T Consensus 361 ~~~~~~l-~~~~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~g~~~~liRlsvG~--E~~~dl~~dl~~al 429 (430)
T 3ri6_A 361 YRFMDAL-KLIRRATNIHDNKSLILSPYHVIYALNSHEERLKLEISPAMMRLSVGI--EEIEDLKEDILQAL 429 (430)
T ss_dssp HHHHHHC-SSSEECSCCSCSSCEEECTGGGC---------CGGGSCTTEEEEECCS--SCHHHHHHHHHHHH
T ss_pred HHHHHhC-CcceecCCCCCCCceeeCCcccccccCCHHHHHhcCCCCCeEEEEecc--CCHHHHHHHHHHhh
Confidence 3444433 45566777777554 15789999985 34455555555543
No 196
>1n8p_A Cystathionine gamma-lyase; three open alpha/beta structures; HET: PLP; 2.60A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=99.96 E-value=2e-27 Score=224.15 Aligned_cols=282 Identities=15% Similarity=0.112 Sum_probs=195.7
Q ss_pred CCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHH----HHHhCCCeEEEee
Q 014936 77 AGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYEL----SAAFRHIEVRHFD 152 (415)
Q Consensus 77 ~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~----~~~~~g~~~~~~~ 152 (415)
....++|+.+|++++ . ++.++++++++++++++. +.++||+|+++.|+|++... .++..|+++..++
T Consensus 55 ~~~~~lr~~la~~~g------~--~~~i~~~sGt~a~~~al~-~~~~gd~Vi~~~~~y~~~~~~~~~~~~~~G~~v~~v~ 125 (393)
T 1n8p_A 55 PNRENLERAVAALEN------A--QYGLAFSSGSATTATILQ-SLPQGSHAVSIGDVYGGTHRYFTKVANAHGVETSFTN 125 (393)
T ss_dssp HHHHHHHHHHHHHTT------C--SEEEEESCHHHHHHHHHH-TSCSSCEEEEESSCCHHHHHHHHHTSTTTCSCCEEES
T ss_pred hhHHHHHHHHHHHhC------C--CcEEEECChHHHHHHHHH-HcCCCCEEEEeCCCchHHHHHHHHHHHHcCcEEEEeC
Confidence 457899999999983 2 256666667999999999 88999999999999986544 3466788988887
Q ss_pred ccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhc----CcEEEEccccCCcccCCCCcccc
Q 014936 153 LLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKL----KTLVIADEVYGHLVFGDKPFVPM 228 (415)
Q Consensus 153 ~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~----~~~li~De~~~~~~~~~~~~~~~ 228 (415)
.+ | +++++++++++++|++++|+||||.+++ +++|+++|+++ |+++|+|++|+.+.+. . .
T Consensus 126 ~~-------d-~~l~~~i~~~t~lv~~~~~~nptG~~~~---l~~i~~la~~~~~~~~~~livD~a~~~~~~~--~---~ 189 (393)
T 1n8p_A 126 DL-------L-NDLPQLIKENTKLVWIETPTNPTLKVTD---IQKVADLIKKHAAGQDVILVVDNTFLSPYIS--N---P 189 (393)
T ss_dssp SH-------H-HHHHHHSCSSEEEEEECSSCTTTCCCCC---HHHHHHHHHHHTTTTTCEEEEECTTTHHHHC--C---G
T ss_pred CC-------h-HHHHHhcccCceEEEEECCCCCcceecC---HHHHHHHHHHhCCCCCCEEEEeCCccccccC--C---H
Confidence 52 6 8899999888999999999999999986 78888889999 9999999999987653 1 1
Q ss_pred cccCCCCCeEEEccCccccCCCCceE-EEEEeeCCCCCCChHHHHHHHHhhcc-ccCCchhHHHHHHHHhhCCCcHHHHH
Q 014936 229 GVFGSTVPILTLGSLSKRWIVPGWRL-GWFVTTDPCGMFRKPKVVERMKKYFD-ILGDPATFIQAAVPSILQQPDEVFFK 306 (415)
Q Consensus 229 ~~~~~~~~~i~~~s~sK~~~~~G~r~-G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~ 306 (415)
..++ ..+++.|+||.++.+|+|+ ||+++++ +++++.+..... .....++....++...++. +.
T Consensus 190 ~~~~---~di~~~S~sK~~g~~G~rigG~~~~~~-------~~~~~~l~~~~~~~g~~~~~~~~~~~~~~l~~-----~~ 254 (393)
T 1n8p_A 190 LNFG---ADIVVHSATKYINGHSDVVLGVLATNN-------KPLYERLQFLQNAIGAIPSPFDAWLTHRGLKT-----LH 254 (393)
T ss_dssp GGGT---CSEEEEETTTTTTCSSCCCCEEEEESC-------HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHTT-----HH
T ss_pred HHcC---CeEEEEECcccccCCCCceeEEEEeCC-------HHHHHHHHHHHHhcCCCCCHHHHHHHHhccch-----HH
Confidence 2232 3488999999999999999 9988743 256777665532 2344566666666666654 45
Q ss_pred HHHHHHHHHHHHHHHHhhcCCC-CcCCCCC---------------C--C-ceEEEEecCccccCCCCCHHHHHHHHHhhc
Q 014936 307 KTLNLLKQSVDICYNKIKEIPC-ISCPHKP---------------E--G-SMAVMLKLNLSLLDDIIDDIDFCFKLAKEE 367 (415)
Q Consensus 307 ~~~~~~~~~~~~l~~~l~~~~~-~~~~~~p---------------~--~-g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~ 367 (415)
.+.++..+++..+.+.|++.+. +..+..| . . +.++++.++... .+...++.. ++..
T Consensus 255 ~~~~~~~~~~~~l~~~L~~~~~~l~~v~~p~l~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~----~~~~~~l~~-l~~~ 329 (393)
T 1n8p_A 255 LRVRQAALSANKIAEFLAADKENVVAVNYPGLKTHPNYDVVLKQHRDALGGGMISFRIKGGA----EAASKFASS-TRLF 329 (393)
T ss_dssp HHHHHHHHHHHHHHHHHTSCTTTEEEEECTTSTTSTTHHHHHHHSGGGCCCSEEEEEESSCH----HHHHHHHHH-CSSS
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCceEEECCCCCCCccHHHHHhhCCCCCCccEEEEEeCCcH----HHHHHHHhh-CCcc
Confidence 5566667777777777776644 2211112 1 2 567787775310 012333333 3334
Q ss_pred CeEEEcCCCC----------------------CC-CCeEEEEeeC--ChhhHHHHHHHHHH
Q 014936 368 SVIILPGTAV----------------------GL-KNWLRVTFAV--DPYSLEECLDRIKS 403 (415)
Q Consensus 368 gi~v~~g~~~----------------------~~-~~~iRi~~~~--~~~~l~~~l~~l~~ 403 (415)
++.++.|+.| +. ++.||+|++. ++++++.+.+.|++
T Consensus 330 ~~~~s~G~~~s~~~~p~~~~h~~~~~~~~~~~g~~~~~iRlS~g~~~~~~~i~~l~~al~~ 390 (393)
T 1n8p_A 330 TLAESLGGIESLLEVPAVMTHGGIPKEAREASGVFDDLVRISVGIEDTDDLLEDIKQALKQ 390 (393)
T ss_dssp EECSCCCCSSCEEECTTTTTSCSSCTTTTTTTSCCTTEEEEECCSSCHHHHHHHHHHHHHH
T ss_pred eECCCCCCCcceeeccccccccccCHHHHHhcCCCCCeEEEEEccCCHHHHHHHHHHHHHH
Confidence 5555444321 11 4789999974 45566666665554
No 197
>3cog_A Cystathionine gamma-lyase; CTH, PLP, propargylglycine, SGC, inhibitor, structural genom stockholm, structural genomics consortium; HET: PLP; 2.00A {Homo sapiens} PDB: 2nmp_A* 3elp_B
Probab=99.96 E-value=1.3e-26 Score=219.25 Aligned_cols=287 Identities=13% Similarity=0.109 Sum_probs=195.6
Q ss_pred CCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHH----HHhCC
Q 014936 70 FNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELS----AAFRH 145 (415)
Q Consensus 70 ~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~----~~~~g 145 (415)
+.+|++ .+..++|+.+|++++ .. +.+++++| ++++..++. +.++||+|+++.|+|++.... ++..|
T Consensus 61 y~r~~~-p~~~~l~~~la~~~g------~~-~~i~~~sG-~~ai~~~~~-l~~~gd~Vl~~~~~y~~~~~~~~~~~~~~G 130 (403)
T 3cog_A 61 YSRSGN-PTRNCLEKAVAALDG------AK-YCLAFASG-LAATVTITH-LLKAGDQIICMDDVYGGTNRYFRQVASEFG 130 (403)
T ss_dssp -----C-HHHHHHHHHHHHHHT------CS-EEEEESCH-HHHHHHHHT-TSCTTCEEEEESSCCHHHHHHHHHTGGGGT
T ss_pred ccCCCC-chHHHHHHHHHHHhC------CC-cEEEECCH-HHHHHHHHH-HhCCCCEEEEeCCCcchHHHHHHHHHHHcC
Confidence 345655 467899999999983 22 45555554 699999998 889999999999999975543 35679
Q ss_pred CeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcC-cEEEEccccCCcccCCCC
Q 014936 146 IEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLK-TLVIADEVYGHLVFGDKP 224 (415)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~-~~li~De~~~~~~~~~~~ 224 (415)
+++..++.+ |++++++++++++++|++++|+||||.+++ +++|+++|+++| +++|+|++|..+.+.
T Consensus 131 ~~v~~v~~~-------d~~~l~~~i~~~t~~v~~~~p~nptG~~~~---l~~i~~la~~~g~~~livD~~~~~~~~~--- 197 (403)
T 3cog_A 131 LKISFVDCS-------KIKLLEAAITPETKLVWIETPTNPTQKVID---IEGCAHIVHKHGDIILVVDNTFMSPYFQ--- 197 (403)
T ss_dssp CEEEEECTT-------SHHHHHHHCCTTEEEEEEESSCTTTCCCCC---HHHHHHHHTSSSCCEEEEECTTTCTTTC---
T ss_pred CEEEEECCC-------CHHHHHHhcCcCCeEEEEECCCCCCCeeeC---HHHHHHHHHHcCCCEEEEECCCcccccC---
Confidence 999888752 789999999989999999999999999986 888899999999 999999999986542
Q ss_pred cccccccCCCCCeEEEccCccccCCCC-ceEEEEEeeCCCCCCChHHHHHHHHhhcc-ccCCchhHHHHHHHHhhCCCcH
Q 014936 225 FVPMGVFGSTVPILTLGSLSKRWIVPG-WRLGWFVTTDPCGMFRKPKVVERMKKYFD-ILGDPATFIQAAVPSILQQPDE 302 (415)
Q Consensus 225 ~~~~~~~~~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~a~~~~l~~~~~ 302 (415)
.++. + +..+++.|+||.++.+| .|+||+++++ +++.+.++.... .+...++..+.++...++.
T Consensus 198 -~~~~-~---~~div~~S~sK~~~g~~~~~~G~v~~~~-------~~l~~~l~~~~~~~g~~~~~~~~~~~~~~l~~--- 262 (403)
T 3cog_A 198 -RPLA-L---GADISMYSATKYMNGHSDVVMGLVSVNC-------ESLHNRLRFLQNSLGAVPSPIDCYLCNRGLKT--- 262 (403)
T ss_dssp -CTTT-T---TCSEEEEETTTTTTCSSCCCCEEEEECC-------HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHTT---
T ss_pred -Cccc-c---CCeEEEEcChhhccCCCCCeEEEEEECc-------HHHHHHHHHHHHhcCCCCCHHHHHHHHhhhhH---
Confidence 1221 2 24589999999988766 5799999854 257777765533 3455678888888888865
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcC--------------CCCcCCCCC----CCceEEEEecCccccCCCCCHHHHHHHHH
Q 014936 303 VFFKKTLNLLKQSVDICYNKIKEI--------------PCISCPHKP----EGSMAVMLKLNLSLLDDIIDDIDFCFKLA 364 (415)
Q Consensus 303 ~~~~~~~~~~~~~~~~l~~~l~~~--------------~~~~~~~~p----~~g~~~~~~l~~~~~~~~~~~~~~~~~ll 364 (415)
+..+.++..++...+.+.+++. |++.+. .+ .++++. +.++. .. +....++
T Consensus 263 --l~~r~~~~~~n~~~l~~~l~~~~~v~~~~~~~L~~~p~~~~~-~~~~~~~g~~~~-~~l~~-------~~-~~~~~~l 330 (403)
T 3cog_A 263 --LHVRMEKHFKNGMAVAQFLESNPWVEKVIYPGLPSHPQHELV-KRQCTGCTGMVT-FYIKG-------TL-QHAEIFL 330 (403)
T ss_dssp --HHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTSTTHHHH-HHHCSCCCSEEE-EEESS-------CH-HHHHHHH
T ss_pred --HHHHHHHHHHHHHHHHHHHhcCCCEEEEECCCCCCCCcHHHH-HhcCCCCceEEE-EEecC-------CH-HHHHHHH
Confidence 3334444455555555555433 333211 11 244444 45642 22 3345566
Q ss_pred hhcCeEEEc---CC----------CC------------CC-CCeEEEEeeCChhhHHHHHHHHHHHHHHH
Q 014936 365 KEESVIILP---GT----------AV------------GL-KNWLRVTFAVDPYSLEECLDRIKSFYQRH 408 (415)
Q Consensus 365 ~~~gi~v~~---g~----------~~------------~~-~~~iRi~~~~~~~~l~~~l~~l~~~~~~~ 408 (415)
.+.||.+.. |. .+ +. +++||+|++. ++.++.+++|.+++++.
T Consensus 331 ~~~~i~~~~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~g~~~~~iRlSvg~--e~~~d~i~~l~~al~~~ 398 (403)
T 3cog_A 331 KNLKLFTLAESLGGFESLAELPAIMTHASVLKNDRDVLGISDTLIRLSVGL--EDEEDLLEDLDQALKAA 398 (403)
T ss_dssp HHCSSSEECSCCSSSSCEEECTTTTTTTTSCHHHHHHHTCCTTEEEEECCS--SCHHHHHHHHHHHHHHH
T ss_pred HhCCcceEccCCCCcceeeecccccccccCCHHHHHhcCCCcCeEEEEeCC--CCHHHHHHHHHHHHHHh
Confidence 777885432 21 11 22 5799999976 34455666666666543
No 198
>1o69_A Aminotransferase; structural genomics, unknown function; HET: X04; 1.84A {Campylobacter jejuni} SCOP: c.67.1.4 PDB: 1o62_A 1o61_A*
Probab=99.95 E-value=2e-26 Score=217.82 Aligned_cols=311 Identities=13% Similarity=0.135 Sum_probs=214.5
Q ss_pred cHHHHHHHHHHHhcCCCCCCCCCCC--cHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHh-cCCCCEEEEc
Q 014936 54 THVATEAVAEALLSEKFNGYAPTAG--LPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALL-SRPGANILLP 130 (415)
Q Consensus 54 ~~~~~~a~~~~~~~~~~~~y~~~~g--~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l-~~~gd~vi~~ 130 (415)
++++++++.+.+.. .|.++.| ..++|+++|++++ .+++++++|+++++.+++.++ .++||+|+++
T Consensus 11 ~~~v~~a~~~~~~~----~~~~~~g~~~~~l~~~la~~~~--------~~~v~~~~ggt~al~~~~~~l~~~~gd~Vl~~ 78 (394)
T 1o69_A 11 GGNELKYIEEVFKS----NYIAPLGEFVNRFEQSVKDYSK--------SENALALNSATAALHLALRVAGVKQDDIVLAS 78 (394)
T ss_dssp -CCHHHHHHHHHHH----TTTSCTTHHHHHHHHHHHHHHC--------CSEEEEESCHHHHHHHHHHHTTCCTTCEEEEE
T ss_pred CHHHHHHHHHHHHc----CCccCCChHHHHHHHHHHHHhC--------CCcEEEeCCHHHHHHHHHHHcCCCCCCEEEEC
Confidence 46678888888764 2555457 8999999999983 379999999999999999999 8999999999
Q ss_pred CCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCC---CceEEEecCCCCccccCCCHHHHHHHHHHHhhcCc
Q 014936 131 RPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ---NTVALVIINPGNPCGNVYSYQHLQKLAETANKLKT 207 (415)
Q Consensus 131 ~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~---~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~ 207 (415)
.|+|+++...++..|++++.++.+ .++.+|++++++.+++ ++++|++++ |+|.. .++++|.++|+++|+
T Consensus 79 ~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~~~~~~~v~~~~---~~G~~---~~l~~i~~l~~~~~~ 150 (394)
T 1o69_A 79 SFTFIASVAPICYLKAKPVFIDCD--ETYNIDVDLLKLAIKECEKKPKALILTH---LYGNA---AKMDEIVEICKENDI 150 (394)
T ss_dssp SSSCGGGTHHHHHTTCEEEEECBC--TTSSBCHHHHHHHHHHCSSCCCEEEEEC---GGGCC---CCHHHHHHHHHHTTC
T ss_pred CCccHHHHHHHHHcCCEEEEEEeC--CCCCcCHHHHHHHHhcccCCceEEEEEC---CCCCh---hhHHHHHHHHHHcCC
Confidence 999999999999999999999875 4567899999998876 688888875 78966 678889999999999
Q ss_pred EEEEccccC-CcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhhccccC-C-
Q 014936 208 LVIADEVYG-HLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILG-D- 284 (415)
Q Consensus 208 ~li~De~~~-~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~- 284 (415)
++|+|++|+ ++.+.+.... .+.. +.+.|+||..+++|.|+||+++++ +++++.++....... .
T Consensus 151 ~li~Dea~~~g~~~~~~~~~---~~~~----~~~~s~s~~K~l~~~~~G~~~~~~-------~~l~~~l~~~~~~~~~~~ 216 (394)
T 1o69_A 151 VLIEDAAEALGSFYKNKALG---TFGE----FGVYSYNGNKIITTSGGGMLIGKN-------KEKIEKARFYSTQARENC 216 (394)
T ss_dssp EEEEECTTCTTCEETTEETT---SSSS----EEEEECCTTSSSCCSSCEEEEESC-------HHHHHHHHHHTBTCCCSS
T ss_pred EEEEECcCcccceeCCcccc---cccC----cEEEEEeCCccCCCCCceEEEECC-------HHHHHHHHHHHHhccccC
Confidence 999999999 4444432211 1111 445556444345677899999953 256777765422110 0
Q ss_pred -------------chhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCC----Cce-EEEEecC
Q 014936 285 -------------PATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPE----GSM-AVMLKLN 346 (415)
Q Consensus 285 -------------~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~----~g~-~~~~~l~ 346 (415)
.++....++...++ ++++..++++++++++.+.|+++ +... .+. .++ ++++.++
T Consensus 217 ~~~~~~~~g~~~~~~~~~aa~~l~~l~-----~l~~~~~~~~~~~~~l~~~L~~~--~~~~-~~~~~~~~~~~~~~i~~~ 288 (394)
T 1o69_A 217 LHYEHLDYGYNYRLSNVLGAIGVAQME-----VLEQRVLKKREIYEWYKEFLGEY--FSFL-DELENSRSNRWLSTALIN 288 (394)
T ss_dssp SSCCCSSCCCBCBCCHHHHHHHHHHHT-----THHHHHHHHHHHHHHHHHHHTTT--EECC-CCCTTEECCCSSEEEEES
T ss_pred ccccccccCcccCcCHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHhccc--cccc-CCCCCCcceeEEEEEEec
Confidence 22233333222343 36677888899999999999876 4422 221 232 3566665
Q ss_pred ccc--------------cCC--CCCHHHHHHHHHhhcCeEEEcCCCCC--C---C---------------CeEEEEe--e
Q 014936 347 LSL--------------LDD--IIDDIDFCFKLAKEESVIILPGTAVG--L---K---------------NWLRVTF--A 388 (415)
Q Consensus 347 ~~~--------------~~~--~~~~~~~~~~ll~~~gi~v~~g~~~~--~---~---------------~~iRi~~--~ 388 (415)
... .+. ..+..++...| .++||.+++|..+. . . ..+|+.+ .
T Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L-~~~gI~v~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 367 (394)
T 1o69_A 289 FDKNELNACQKDINISQKNITLHPKISKLIEDL-KNKQIETRPLWKAMHTQEVFKGAKAYLNGNSELFFQKGICLPSGTA 367 (394)
T ss_dssp CCGGGSCCCCEEEECCCCCCCCCHHHHHHHHHH-HHTTCCCBCCCCCGGGCGGGTTCEEEECSHHHHHHHHEEEECCCTT
T ss_pred chhhccccccccccccccccccccCHHHHHHHH-HHcCCcccccCCccccchhhhccCCCCChHHHHHhcCeEEccCCCC
Confidence 210 000 00234555554 66799999885331 0 1 2344444 3
Q ss_pred CChhhHHHHHHHHHHHHHH
Q 014936 389 VDPYSLEECLDRIKSFYQR 407 (415)
Q Consensus 389 ~~~~~l~~~l~~l~~~~~~ 407 (415)
.+++|++.+++.|+++++.
T Consensus 368 ~t~edi~~~~~~l~~~~~~ 386 (394)
T 1o69_A 368 MSKDDVYEISKLILKSIKA 386 (394)
T ss_dssp CCHHHHHHHHHHHHHHHC-
T ss_pred CCHHHHHHHHHHHHHHHhc
Confidence 6899999999999887653
No 199
>2vi8_A Serine hydroxymethyltransferase; SHMT, E53Q, FTHF, enzyme memory, pyridoxal phosphate, one-carbon metabolism, PLP-dependent enzymes; HET: PLP; 1.67A {Bacillus stearothermophilus} PDB: 2vi9_A* 2via_A* 2vib_A* 1kkj_A* 1kkp_A* 1kl1_A* 1kl2_A* 1yjs_A* 2w7f_A* 2w7d_A* 2w7e_A* 2w7g_A* 2w7h_A* 1yjz_A* 1yjy_A* 2vgu_A* 2vgs_A* 2vgt_A* 2vgv_A* 2vgw_A* ...
Probab=99.95 E-value=2.2e-27 Score=225.29 Aligned_cols=332 Identities=13% Similarity=0.112 Sum_probs=222.2
Q ss_pred cceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCC------CCCCCcHHHH----HHHHHHHhhhCCCCCCCCcEE
Q 014936 35 KKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGY------APTAGLPLTR----RAIAEYLSRDLPYKLTPNDVF 104 (415)
Q Consensus 35 ~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y------~~~~g~~~lr----~~ia~~~~~~~~~~~~~~~i~ 104 (415)
+.+++++.++| .++.+++++.+.+.......| +......+++ +.+++++ +.+++.++
T Consensus 24 ~~~~~~~~~~~-------~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~r~~la~~~------g~~~~~i~ 90 (405)
T 2vi8_A 24 AKIELIASENF-------VSRAVMEAQGSVLTNKYAEGYPGRRYYGGCEYVDIVEELARERAKQLF------GAEHANVQ 90 (405)
T ss_dssp HSEECCTTCCC-------CCHHHHHHHTSGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHH------TCSEEECC
T ss_pred cceeeccCccc-------CCHHHHHHHHHHhhcccccCCCCccccccchHHHHHHHHHHHHHHHHh------CCCceEEE
Confidence 45667655542 278999999888752211122 1111234555 4666666 23433444
Q ss_pred EeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHH-H--HHhCC--CeEEEeeccCCCCCCCChhHHHhhcCC-CceEEE
Q 014936 105 VTSGCTQAIDVAMALLSRPGANILLPRPGFPIYEL-S--AAFRH--IEVRHFDLLPDKGWEVDLDDIESLADQ-NTVALV 178 (415)
Q Consensus 105 i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~-~--~~~~g--~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~v~ 178 (415)
+++| ++++..++.++.++||+|+++.|+|+.+.. . +...| .++..+++++ .++.+|++++++.+++ ++++++
T Consensus 91 ~~sG-t~a~~~a~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~~d~~~l~~~i~~~~~~~v~ 168 (405)
T 2vi8_A 91 PHSG-AQANMAVYFTVLEHGDTVLGMNLSHGGHLTHGSPVNFSGVQYNFVAYGVDP-ETHVIDYDDVREKARLHRPKLIV 168 (405)
T ss_dssp CSSH-HHHHHHHHHHHCCTTCEEEEECGGGTCCTTTTCTTSHHHHHSEEEEECBCT-TTCSBCHHHHHHHHHHHCCSEEE
T ss_pred ecCc-HHHHHHHHHHhcCCCCEEEEecccccchhcccchhhhccceeEEEeccccc-ccCCcCHHHHHHHHHhcCCeEEE
Confidence 4555 999999999999999999999999987753 1 12233 3666666543 3567899999998875 677766
Q ss_pred ecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccC-CCCceEEEE
Q 014936 179 IINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWI-VPGWRLGWF 257 (415)
Q Consensus 179 i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~-~~G~r~G~~ 257 (415)
+ +|+|. |.. .++++|.++|+++|+++|+||+|+.+..... ... ..+.. ..++++|+||+++ +.| ||+
T Consensus 169 ~-~~~~~-~~~---~~l~~i~~l~~~~~~~li~Dea~~~g~~~~~-~~~-~~~~~--~di~~~s~sK~~~g~~g---G~~ 236 (405)
T 2vi8_A 169 A-AAAAY-PRI---IDFAKFREIADEVGAYLMVDMAHIAGLVAAG-LHP-NPVPY--AHFVTTTTHKTLRGPRG---GMI 236 (405)
T ss_dssp E-CCSSC-CSC---CCHHHHHHHHHHHTCEEEEECTTTHHHHHTT-SSC-CSTTT--CSEEEEESSSTTCCCSC---EEE
T ss_pred E-eCCCC-Ccc---CCHHHHHHHHHHcCCEEEEEccccccccccC-cCC-Ccccc--CCEEEEeccccCCCCCC---eEE
Confidence 6 55553 344 3478999999999999999999995432211 111 11111 1288899999986 555 999
Q ss_pred EeeCCCCCCChHHHHHHHHhhc-ccc-CCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCC
Q 014936 258 VTTDPCGMFRKPKVVERMKKYF-DIL-GDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKP 335 (415)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p 335 (415)
++++ ++++.++... ... +++++....++.++++.....++++..++++++++++.+.|+++ ++.++ .|
T Consensus 237 ~~~~--------~~~~~l~~~~~~~~~~~~~~~~~aa~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~ 306 (405)
T 2vi8_A 237 LCQE--------QFAKQIDKAIFPGIQGGPLMHVIAAKAVAFGEALQDDFKAYAKRVVDNAKRLASALQNE-GFTLV-SG 306 (405)
T ss_dssp EECH--------HHHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHT-TCEEG-GG
T ss_pred EEcH--------HHHHHHHhhhcccccCCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhC-CCeEe-cC
Confidence 9864 5777776543 222 23345555555555543222577889999999999999999988 77733 44
Q ss_pred -CCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCC----CC--CCCeEEEEee------CChhhHHHHHHHHH
Q 014936 336 -EGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTA----VG--LKNWLRVTFA------VDPYSLEECLDRIK 402 (415)
Q Consensus 336 -~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~----~~--~~~~iRi~~~------~~~~~l~~~l~~l~ 402 (415)
..++++|+.++... .+..++...+ .++||.+.+|.. ++ .++++|++++ .++++++.++++|+
T Consensus 307 ~~~~~~~~~~~~~~~----~~~~~~~~~l-~~~gi~v~~g~~~~~~~~~~~~~~iRis~~~~~~~~~~~~~i~~~~~~l~ 381 (405)
T 2vi8_A 307 GTDNHLLLVDLRPQQ----LTGKTAEKVL-DEVGITVNKNTIPYDPESPFVTSGIRIGTAAVTTRGFGLEEMDEIAAIIG 381 (405)
T ss_dssp SCSSSEEEEECGGGT----CCHHHHHHHH-HHHTEECEEECCTTCSSCTTTCSEEEEECHHHHHTTCCHHHHHHHHHHHH
T ss_pred CCCceEEEEEccCCC----CCHHHHHHHH-HHcCceeccCcCccccCCCCCCCceEEeeeeeeecCCCHHHHHHHHHHHH
Confidence 46889999886321 1355555554 678999999863 22 2578999996 37999999999999
Q ss_pred HHHHHH
Q 014936 403 SFYQRH 408 (415)
Q Consensus 403 ~~~~~~ 408 (415)
+++++.
T Consensus 382 ~~~~~~ 387 (405)
T 2vi8_A 382 LVLKNV 387 (405)
T ss_dssp HHHTCT
T ss_pred HHHhcc
Confidence 987653
No 200
>3ju7_A Putative PLP-dependent aminotransferase; NP_978343.1, struct genomics, joint center for structural genomics, JCSG; HET: LLP PGE; 2.19A {Bacillus cereus atcc 10987}
Probab=99.95 E-value=1.1e-26 Score=217.65 Aligned_cols=314 Identities=13% Similarity=0.137 Sum_probs=218.5
Q ss_pred CCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHH-HHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHh-cCCCCEE
Q 014936 50 CFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAI-AEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALL-SRPGANI 127 (415)
Q Consensus 50 ~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~i-a~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l-~~~gd~v 127 (415)
++++++.+++++.+.+..+.+..|++ ...++++++ |++++ ..+++++++|+++++.+++.++ .++||+|
T Consensus 11 ~~~~~~~i~~a~~~~~~~~~~~~~~~--~~~~l~~~~~a~~~g-------~~~~~v~~~sgt~al~~al~~l~~~~Gd~V 81 (377)
T 3ju7_A 11 STVPVIEYLDELKEIDASHIYTNYGP--INQRFEQTIMSGFFQ-------NRGAVTTVANATLGLMAAIQLKKRKKGKYA 81 (377)
T ss_dssp CCCCGGGGHHHHHHHHHHTCCSSSCH--HHHHHHHHHHHHTST-------TCSEEEEESCHHHHHHHHHHHHSCTTCCEE
T ss_pred CCCCcHHHHHHHHHHHHcCCcccCCH--HHHHHHHHHHHHHhC-------CCCeEEEeCCHHHHHHHHHHHcCCCCcCEE
Confidence 47888999999999988755432343 468999999 99972 2678999999999999999998 8999999
Q ss_pred EEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhc-CCC--ceEEEecCCCCccccCCCHHHHHHHHHHHhh
Q 014936 128 LLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLA-DQN--TVALVIINPGNPCGNVYSYQHLQKLAETANK 204 (415)
Q Consensus 128 i~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~-~~~--~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~ 204 (415)
+++.|+|..+...+...|++++.+++++ +++.+|++++++++ +++ +++|+ |+||+|...+ +++|.++|+
T Consensus 82 i~~~~~~~~~~~~~~~~G~~~~~v~~~~-~~~~~d~~~l~~~i~~~~~~tk~v~---~~~~~G~~~~---~~~i~~la~- 153 (377)
T 3ju7_A 82 LMPSFTFPATPLAAIWCGLEPYFIDISI-DDWYMDKTVLWDKIEELKEEVAIVV---PYATFGSWMN---LEEYEELEK- 153 (377)
T ss_dssp EEESSSCTHHHHHHHHTTCEEEEECBCT-TTCSBCHHHHHHHHHHHGGGEEEEC---CBCGGGBCCC---CHHHHHHHH-
T ss_pred EECCCCcHHHHHHHHHcCCEEEEEecCC-ccCCcCHHHHHHHHhcCCCCceEEE---EECCCCCccC---HHHHHHHHh-
Confidence 9999999999999999999999999864 46789999999988 556 77766 6778999855 677788888
Q ss_pred cCcEEEEccccCCccc-CCCCcccc-cccCCCCCeEEEccC--ccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhhcc
Q 014936 205 LKTLVIADEVYGHLVF-GDKPFVPM-GVFGSTVPILTLGSL--SKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFD 280 (415)
Q Consensus 205 ~~~~li~De~~~~~~~-~~~~~~~~-~~~~~~~~~i~~~s~--sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (415)
+|+++|+|++|+.+.. .+. .+ ..+. + +.+.|| +|.++. | +.|++++++ +++.+.++....
T Consensus 154 ~~~~vi~D~a~a~g~~~~~~---~~g~~~~--d--~~~~S~~~~K~l~~-g-~gG~~~~~~-------~~l~~~~~~~~~ 217 (377)
T 3ju7_A 154 KGVPVVVDAAPGFGLMNGGM---HYGQDFS--G--MIIYSFHATKPFGI-G-EGGLIYSKN-------EEDIQRIKRMGN 217 (377)
T ss_dssp TTCCBEEECTTCTTCEETTE---ETTTTCS--S--EEEEECBTTSSSCC-B-SCEEEEESC-------HHHHHHHHHHTB
T ss_pred cCCEEEEECCCccCCeECCE---eccCCCC--c--EEEEECCCCCcCCC-C-CcEEEEECC-------HHHHHHHHHHHh
Confidence 9999999999987542 211 11 1111 1 444554 698764 4 578887755 357777665533
Q ss_pred c-------------cCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCc-----eEEE
Q 014936 281 I-------------LGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGS-----MAVM 342 (415)
Q Consensus 281 ~-------------~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g-----~~~~ 342 (415)
. ....+.+....+...++ .++...++.+++++.+.+.|++++++.....+..+ .|+.
T Consensus 218 ~g~~~~~~~~~~g~~~~~~~~~aa~~~~~l~-----~l~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ 292 (377)
T 3ju7_A 218 FGFDTNRECTMMGFNCKMSEYAAAIGIATMK-----KWDDKLKERTRISEWYKQLLQSNGLMKKGWQLQKTEAVIQQFMP 292 (377)
T ss_dssp TTBCTTSCBCSSCCBCCCCHHHHHHHHHHHH-----THHHHHHHHHHHHHHHHHHHHHTTTTTTTCBCCCCSCBCCSSEE
T ss_pred cCCCCCCceeeccccCCCCHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHhcCCCCccccccCCCCCcceEEEEE
Confidence 1 23345555444544553 36677778888888888888887654212123222 1334
Q ss_pred EecCccccCCCCCHHHHHHHHHhhcCeEEEcCCC--CCC-------------------CCeEEEEee--CChhhHHHHHH
Q 014936 343 LKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTA--VGL-------------------KNWLRVTFA--VDPYSLEECLD 399 (415)
Q Consensus 343 ~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~--~~~-------------------~~~iRi~~~--~~~~~l~~~l~ 399 (415)
+.++.. .+..++...| +++||.+..+.. +.. .+.+|+.+. .++++++..++
T Consensus 293 ~~~~~~-----~~~~~l~~~L-~~~gI~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~lp~~~~~t~~di~~v~~ 366 (377)
T 3ju7_A 293 ILCPEE-----VRNKQVIEDL-KKQKIEARLYFSPSCHQQVLFRNYKSTDLTRTNKIAKRIVSLPLWEGMTKEIVEQIVI 366 (377)
T ss_dssp EECCTT-----SCHHHHHHHH-HTTTBCCBCTTSSCGGGSGGGTTSCBSCCHHHHHHHHHEEEECCCTTCCHHHHHHHHH
T ss_pred EEeCCh-----hhHHHHHHHH-HHCCCceecccCCccccchhhhcCCCCCCHHHHHHHhCEEECCCCCCCCHHHHHHHHH
Confidence 444421 1245555554 677999877652 110 246999984 68999999999
Q ss_pred HHHHHHHH
Q 014936 400 RIKSFYQR 407 (415)
Q Consensus 400 ~l~~~~~~ 407 (415)
.|++++..
T Consensus 367 ~l~~~~~~ 374 (377)
T 3ju7_A 367 CLGQKVVS 374 (377)
T ss_dssp HHTC----
T ss_pred HHHHHHhc
Confidence 99887754
No 201
>2okj_A Glutamate decarboxylase 1; PLP-dependent decarboxylase, lyase; HET: LLP PLZ; 2.30A {Homo sapiens} PDB: 2okk_A*
Probab=99.95 E-value=6.4e-26 Score=221.08 Aligned_cols=328 Identities=11% Similarity=0.048 Sum_probs=226.8
Q ss_pred HHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcC--------CC-----C
Q 014936 59 EAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSR--------PG-----A 125 (415)
Q Consensus 59 ~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~--------~g-----d 125 (415)
+.+...+.... ..|....+..++++.+.+++.+.+|.+.+++++++|+|+|+++..++.++.. +| +
T Consensus 111 ~~l~~~~n~~~-~~~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~~t~ggtea~~~al~~~~~~~~~~~~~~G~~~~~~ 189 (504)
T 2okj_A 111 EWLTSTANTNM-FTYEIAPVFVLMEQITLKKMREIVGWSSKDGDGIFSPGGAISNMYSIMAARYKYFPEVKTKGMAAVPK 189 (504)
T ss_dssp HHHHHHHCCBS-SCTTTCHHHHHHHHHHHHHHHHHHTCCSSSCEEEEESSHHHHHHHHHHHHHHHHCTTHHHHCGGGSCC
T ss_pred HHHHHhhccCC-CchhhChHHHHHHHHHHHHHHHHhCCCCCCCCEEEeCCcHHHHHHHHHHHHHHHhhHHhhcCccccCC
Confidence 44444444332 3565545667788888888887777554478999999999999999988753 56 6
Q ss_pred -EEEEcCCCCcchHHHHHhCCC---eEEEeeccCCCCCCCChhHHHhhcCC------CceEEEecCCCCccccCCCHHHH
Q 014936 126 -NILLPRPGFPIYELSAAFRHI---EVRHFDLLPDKGWEVDLDDIESLADQ------NTVALVIINPGNPCGNVYSYQHL 195 (415)
Q Consensus 126 -~vi~~~p~y~~~~~~~~~~g~---~~~~~~~~~~~~~~~~~~~l~~~~~~------~~~~v~i~~p~nptG~~~~~~~l 195 (415)
.|+++.++|+++...++..|. +++.++.+ .++.+|+++|++++++ ++++|++++|+||||.+ +++
T Consensus 190 ~~v~~s~~~h~s~~~~~~~~g~g~~~v~~v~~~--~~~~~d~~~L~~~i~~~~~~g~~~~~V~~~~~~~~tG~i---~~l 264 (504)
T 2okj_A 190 LVLFTSEQSHYSIKKAGAALGFGTDNVILIKCN--ERGKIIPADFEAKILEAKQKGYVPFYVNATAGTTVYGAF---DPI 264 (504)
T ss_dssp EEEEEETTSCTHHHHHHHHTTSCGGGEEEECBC--TTSCBCHHHHHHHHHHHHHTTCEEEEEEECBSCSSSCCB---CCH
T ss_pred eEEEECCcchHHHHHHHHHcCCCcccEEEEecC--CCCCCCHHHHHHHHHHHHHCCCCceEEEEeCCCCCCCCc---CCH
Confidence 799999999999999988877 78888874 3577999999998865 57889999999999999 568
Q ss_pred HHHHHHHhhcCcEEEEccccCCcccCCCCc-ccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHHH
Q 014936 196 QKLAETANKLKTLVIADEVYGHLVFGDKPF-VPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVER 274 (415)
Q Consensus 196 ~~i~~~~~~~~~~li~De~~~~~~~~~~~~-~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~ 274 (415)
++|+++|+++|+++++|++|+.+.+..... ..+..+.. ..+++.+++|+++.| .++|+++++++. +.+.
T Consensus 265 ~~I~~la~~~g~~lhvD~a~~~~~~~~~~~~~~~~g~~~--~D~i~~~~hK~~~~p-~~~g~l~~~~~~-------~~~~ 334 (504)
T 2okj_A 265 QEIADICEKYNLWLHVDAAWGGGLLMSRKHRHKLNGIER--ANSVTWNPHKMMGVL-LQCSAILVKEKG-------ILQG 334 (504)
T ss_dssp HHHHHHHHHHTCEEEEEETTGGGGGGCTTTGGGGTTGGG--CSEEEECTTSTTCCC-SCCEEEEESSTT-------HHHH
T ss_pred HHHHHHHHHcCCEEEEehhhhhHHHhCHhhHhhcCCccc--CCEEEECchhhcCCC-cceEEEEEECHH-------HHHH
Confidence 889999999999999999999877543222 12222211 126677899997655 689999997632 3332
Q ss_pred HH-hhc-ccc-C-------------------CchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCC
Q 014936 275 MK-KYF-DIL-G-------------------DPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCP 332 (415)
Q Consensus 275 ~~-~~~-~~~-~-------------------~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~ 332 (415)
.. ... ... . ....+.+.++..++. .+.+++..++..++++++.+.|+++|+++++
T Consensus 335 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~rr~~~l~~~a~l~~lg---~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~ 411 (504)
T 2okj_A 335 CNQMCAGYLFQPDKQYDVSYDTGDKAIQCGRHVDIFKFWLMWKAKG---TVGFENQINKCLELAEYLYAKIKNREEFEMV 411 (504)
T ss_dssp HHCCCCSSSCCSCCSSCGGGCCGGGSSCSSCBCCHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHTTCTTEEES
T ss_pred HhcCCCccccCCcccccCcCCcccCCCCCCCCccHHHHHHHHHHhh---HHHHHHHHHHHHHHHHHHHHHHhcCCCEEEE
Confidence 11 110 000 0 012455555555554 3678888999999999999999998888854
Q ss_pred C--CCCCceEEEEecCccccCCCC-----------CHHHHHHHHHhhcCe-EEEcCCCCCCCCeEEEEee---CChhhHH
Q 014936 333 H--KPEGSMAVMLKLNLSLLDDII-----------DDIDFCFKLAKEESV-IILPGTAVGLKNWLRVTFA---VDPYSLE 395 (415)
Q Consensus 333 ~--~p~~g~~~~~~l~~~~~~~~~-----------~~~~~~~~ll~~~gi-~v~~g~~~~~~~~iRi~~~---~~~~~l~ 395 (415)
. .|..+++++...+... .+.. ...++...+. +.|+ .+.++...+..+++|++++ +++++++
T Consensus 412 ~~~~p~~~~v~f~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~L~-~~G~~~~~~~~~~~~~~~lRis~~~~~~t~edi~ 489 (504)
T 2okj_A 412 FNGEPEHTNVCFWYIPQSL-RGVPDSPQRREKLHKVAPKIKALMM-ESGTTMVGYQPQGDKANFFRMVISNPAATQSDID 489 (504)
T ss_dssp SSSCCSSSCEEEEECCGGG-SSCCCCHHHHHHHTTHHHHHHHHHH-HHTSCEEEEEEETTEEEEEEECCCCTTCCHHHHH
T ss_pred ecCCCCeEEEEEEEeCccc-cccccchhhHHHHHHHHHHHHHHHH-hCCcEEEEeeEECCceEEEEEEeCCCCCCHHHHH
Confidence 3 3666776664444210 0000 0234555554 4575 4443322122368999996 6889999
Q ss_pred HHHHHHHHHHHH
Q 014936 396 ECLDRIKSFYQR 407 (415)
Q Consensus 396 ~~l~~l~~~~~~ 407 (415)
.++++|++++++
T Consensus 490 ~~~~~l~~~~~~ 501 (504)
T 2okj_A 490 FLIEEIERLGQD 501 (504)
T ss_dssp HHHHHHHHHHTC
T ss_pred HHHHHHHHHHHH
Confidence 999999988754
No 202
>2qma_A Diaminobutyrate-pyruvate transaminase and L-2,4- diaminobutyrate decarboxylase; structural genomics, APC91511.1, glutamate decarboxylase; HET: MSE; 1.81A {Vibrio parahaemolyticus}
Probab=99.95 E-value=1.1e-26 Score=225.97 Aligned_cols=334 Identities=14% Similarity=0.133 Sum_probs=226.4
Q ss_pred CCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHh----c------
Q 014936 52 HTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALL----S------ 121 (415)
Q Consensus 52 ~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l----~------ 121 (415)
+.++.+.+++.....+.....|.......++++.+.+++.+.+|.+ ..+.+++|+|+++++..++.++ .
T Consensus 111 ~~~~~v~~~~~~~~~n~~~~~~~~~~~~~~le~~~~~~la~~~g~~-~~~~~~~t~ggt~a~~~al~~ar~~~~~~~~~~ 189 (497)
T 2qma_A 111 PLMPAVAAEAMIAALNQSMDSWDQASSATYVEQKVVNWLCDKYDLS-EKADGIFTSGGTQSNQMGLMLARDWIADKLSGH 189 (497)
T ss_dssp CBHHHHHHHHHHHHHCCCTTCGGGCHHHHHHHHHHHHHHHHHTTCC-TTCEEEEESSHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred CcHHHHHHHHHHHhhcccccchhhChHHHHHHHHHHHHHHHHhCCC-CCCCeEEcCCchHHHHHHHHHHHHHHHHhhccc
Confidence 3467777777655444333355544466788888888888777753 2379999999999999998873 2
Q ss_pred ---CC------CC-EEEEcCCCCcchHHHHHhCCC---eEEEeeccCCCCCCCChhHHHhhcCCC----c--eEEEecCC
Q 014936 122 ---RP------GA-NILLPRPGFPIYELSAAFRHI---EVRHFDLLPDKGWEVDLDDIESLADQN----T--VALVIINP 182 (415)
Q Consensus 122 ---~~------gd-~vi~~~p~y~~~~~~~~~~g~---~~~~~~~~~~~~~~~~~~~l~~~~~~~----~--~~v~i~~p 182 (415)
.+ |+ .|+++.++|+++...+...|. +++.++++ .++.+|+++|+++++++ + .+|+++++
T Consensus 190 ~~~~~G~~~~~g~~~v~~s~~~h~s~~~~~~~~g~g~~~v~~v~~~--~~~~~d~~~L~~~i~~~~~~~~~~~~vv~~~~ 267 (497)
T 2qma_A 190 SIQKLGLPDYADKLRIVCSKKSHFTVQKSASWMGLGEKAVMTVDAN--ADGTMDITKLDEVIAQAKAEGLIPFAIVGTAG 267 (497)
T ss_dssp CHHHHCSCGGGGGEEEEEETTSCTHHHHHHHHTTSCGGGEEEECBC--TTSSBCGGGHHHHHHHHHHTTCEEEEEEEEBS
T ss_pred chhhcccccccCCeEEEECCCchHHHHHHHHHcCCCcccEEEEecC--CCCcCCHHHHHHHHHHHHHCCCcceEEEEcCC
Confidence 12 46 899999999999999888876 78888875 35779999999988653 3 37888899
Q ss_pred CCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCC
Q 014936 183 GNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDP 262 (415)
Q Consensus 183 ~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~ 262 (415)
+||||.+ +++++|+++|+++|+++++|++|+.+.+.......+..+.. ..+++.|+||+++.| .++|+++++++
T Consensus 268 ~~~tG~~---~~l~~I~~l~~~~~~~l~vD~a~~~~~~~~~~~~~~~gi~~--~D~i~~s~hK~l~~p-~~~G~l~~~~~ 341 (497)
T 2qma_A 268 TTDHGAI---DDLDFIADMAVKHDMWMHVDGAYGGALILSSHKSRLKGVER--AHSISVDFHKLFYQT-ISCGALLVNDK 341 (497)
T ss_dssp CTTTCCB---CCHHHHHHHHHHHTCEEEEEETTGGGGGGSTTGGGGTTGGG--CSEEEEETTTTTCCC-SSCEEEEESCG
T ss_pred CCCCCCC---CCHHHHHHHHHHcCCEEEEehhhhHHHHhCcchHhhcCccc--CCEEEEcchhccCCC-cceEEEEEeCH
Confidence 9999998 66889999999999999999999987754321111222211 126677899986665 68999998764
Q ss_pred CCCCChHHHHHHHHh---hccccC--Cc-------------hhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhh
Q 014936 263 CGMFRKPKVVERMKK---YFDILG--DP-------------ATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIK 324 (415)
Q Consensus 263 ~~~~~~~~~~~~~~~---~~~~~~--~~-------------~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~ 324 (415)
.. .+.+.. +..... .+ ..+.+.++...+ ..+.++++.+++.++++++.+.|+
T Consensus 342 ~~-------~~~~~~~~~yl~~~~~~~~~~~~~~~~~~r~~~al~~~~~l~~l---g~~g~~~~~~~~~~~a~~l~~~L~ 411 (497)
T 2qma_A 342 SN-------FKFLLHHADYLNREHDELPNLVDKSIATTKRFDALKVFMTMQNV---GPKALGDMYDHLLAQTLEVADMIR 411 (497)
T ss_dssp GG-------GGGGCC--------------------CCSCCCTHHHHHHHHHHT---CHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HH-------HHHhcCCchhcCCccccCCCccccCCCCCCchhHHHHHHHHHHh---CHHHHHHHHHHHHHHHHHHHHHHh
Confidence 31 111110 000000 01 122333334444 347788899999999999999999
Q ss_pred cCCCCcCCCCCCCceEEEEecCccccCCCC-CHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEe---eCChhhHHHHHHH
Q 014936 325 EIPCISCPHKPEGSMAVMLKLNLSLLDDII-DDIDFCFKLAKEESVIILPGTAVGLKNWLRVTF---AVDPYSLEECLDR 400 (415)
Q Consensus 325 ~~~~~~~~~~p~~g~~~~~~l~~~~~~~~~-~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~---~~~~~~l~~~l~~ 400 (415)
++++++++..|.. .++++++..... ... ...++...+ .+.|+.+.++..+...+++|+++ .+++++++.+++.
T Consensus 412 ~~~~~~~~~~~~~-~~v~f~~~~~~~-~~~~l~~~l~~~l-~~~G~~~~~~~~~~g~~~lRis~~~~~~t~edi~~~~~~ 488 (497)
T 2qma_A 412 TNDQFELLAEPSL-STVLFRATHETA-DLDELNKALRLEA-LTRGIAVLGETIVDGKTALKFTILNPCLTTSDFESLLSK 488 (497)
T ss_dssp TCTTEEECSCCSS-SEEEEEECCSSS-CHHHHHHHHHHHH-HHHTSCBCEEEEETTEEEEEEECCCTTCCHHHHHHHHHH
T ss_pred hCCCeEEEcCCCc-eEEEEEEcCCcc-CHHHHHHHHHHHH-HhCCCEEEEeeEECCEEEEEEEecCCCCCHHHHHHHHHH
Confidence 9888884434544 466666643110 000 012344444 45688886655444457899998 3689999999999
Q ss_pred HHHHHHH
Q 014936 401 IKSFYQR 407 (415)
Q Consensus 401 l~~~~~~ 407 (415)
|++++++
T Consensus 489 l~~~~~~ 495 (497)
T 2qma_A 489 INMLAVE 495 (497)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 9988765
No 203
>1js3_A DDC;, DOPA decarboxylase; carbidopa, parkinson'S disease, vitamin; HET: PLP 142; 2.25A {Sus scrofa} SCOP: c.67.1.6 PDB: 1js6_A* 3rch_A* 3rbl_A 3rbf_A*
Probab=99.95 E-value=1.3e-26 Score=224.99 Aligned_cols=333 Identities=9% Similarity=0.029 Sum_probs=230.9
Q ss_pred cHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCC-------CCcEEEeCChHHHHHHHHHHhcCC---
Q 014936 54 THVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLT-------PNDVFVTSGCTQAIDVAMALLSRP--- 123 (415)
Q Consensus 54 ~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~-------~~~i~i~~g~~~al~~~~~~l~~~--- 123 (415)
+..+.+++...+... ...|....+..++++.+++++.+.+|.+.. ...+++|+|+|+++..++.++.++
T Consensus 87 ~~~~~~~~~~~~n~~-~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~v~t~ggTeA~~~al~~~~~~~~~ 165 (486)
T 1js3_A 87 PAMLADMLCGAIGCI-GFSWAASPACTELETVMMDWLGKMLQLPEAFLAGEAGEGGGVIQGSASEATLVALLAARTKVVR 165 (486)
T ss_dssp HHHHHHHHHHHHCCC-CSSGGGCHHHHHHHHHHHHHHHHHTTCCGGGCCTTTCSCEEEEESCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCcC-ccccccChhHHHHHHHHHHHHHHHhCCCchhcccCCCCCCeEEcCCcHHHHHHHHHHHHHHHhh
Confidence 455777777776543 335665556789999999999988886532 357899999999999998776421
Q ss_pred ------CC--------E--EEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCc------eEEEecC
Q 014936 124 ------GA--------N--ILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNT------VALVIIN 181 (415)
Q Consensus 124 ------gd--------~--vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~------~~v~i~~ 181 (415)
|| . |+++.++|+++...++..|++++.++++ .++.+|+++|++++++++ .+|++++
T Consensus 166 ~~~~~~gd~~~~~~~~~~~v~~s~~~h~s~~~~~~~~G~~v~~v~~d--~~~~~d~~~L~~~i~~~~~~g~~p~~vv~~~ 243 (486)
T 1js3_A 166 RLQAASPGLTQGAVLEKLVAYASDQAHSSVERAGLIGGVKLKAIPSD--GKFAMRASALQEALERDKAAGLIPFFVVATL 243 (486)
T ss_dssp HHHHHSTTCCHHHHHHHEEEEEETTCCHHHHHHHHHHTCEEEEECCC--TTSCCCHHHHHHHHHHHHHTTCEEEEEEEEB
T ss_pred hhhccCccchhcccCCCEEEEECCCCcHHHHHHHHhCCCceEEeecC--CCCCCCHHHHHHHHHHHHhCCCCceEEEEeC
Confidence 42 3 7889999999999999999999999874 467899999999997655 3788999
Q ss_pred CCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCccc-ccccCCCCCeEEEccCccccCCCCceEEEEEee
Q 014936 182 PGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVP-MGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTT 260 (415)
Q Consensus 182 p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~-~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~ 260 (415)
|+||||.+ +++++|+++|+++|+++++|++|+.+.+....... +..+... . .+..++||+++.| +++|+++++
T Consensus 244 ~~n~tG~~---~~l~~I~~la~~~~~~lhvD~a~g~~~~~~~~~~~~~~g~~~a-d-si~~~~hK~~~~p-~~~G~l~~~ 317 (486)
T 1js3_A 244 GTTSCCSF---DNLLEVGPICHEEDIWLHVDAAYAGSAFICPEFRHLLNGVEFA-D-SFNFNPHKWLLVN-FDCSAMWVK 317 (486)
T ss_dssp SCTTTCCB---CCHHHHHHHHHHTTCEEEEECTTGGGGGGSTTTGGGGTTGGGC-S-EEEECHHHHSSCC-SSCEEEEES
T ss_pred CCCCCCCC---CCHHHHHHHHHHcCCEEEEehhhHHHHHHCHHHHHHhcCcccc-C-eeEEchhhhcCCC-cceEEEEEe
Confidence 99999988 78999999999999999999999986643221111 1122111 2 4456889996655 889999997
Q ss_pred CCCCCCChHHHHHHHHh---hc-c-----------------ccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHH
Q 014936 261 DPCGMFRKPKVVERMKK---YF-D-----------------ILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDIC 319 (415)
Q Consensus 261 ~~~~~~~~~~~~~~~~~---~~-~-----------------~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l 319 (415)
++. .+.+.+.. +. . .+.....+.+.++...+. .+.++++.++..++++++
T Consensus 318 ~~~------~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~rr~~~~~~~~al~~~g---~~g~~~~~~~~~~~a~~l 388 (486)
T 1js3_A 318 RRT------DLTGAFKLDPVYLKHSHQGSGLITDYRHWQLPLGRRFRSLKMWFVFRMYG---VKGLQAYIRKHVQLSHEF 388 (486)
T ss_dssp CHH------HHHGGGC------------CCSCCCGGGSSSCSCCCCTHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHH
T ss_pred CHH------HHHHHhcCCchhhCCCcccccCCCCccccCCCCCCchhHHHHHHHHHHHh---HHHHHHHHHHHHHHHHHH
Confidence 621 01222110 00 0 000123344555544442 367888999999999999
Q ss_pred HHHhhcCCCCcCCCCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEee---CChhhHHH
Q 014936 320 YNKIKEIPCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFA---VDPYSLEE 396 (415)
Q Consensus 320 ~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~---~~~~~l~~ 396 (415)
.+.|+++|+++++..|..+. +.++++... ....++...+.++ |+.+.++..+...+++|+++. +++++++.
T Consensus 389 ~~~L~~~~~~~~~~~~~~~~-v~f~~~~~~----~~~~~l~~~L~~~-g~~~~~~~~~~~~~~lRi~~~~~~~t~~di~~ 462 (486)
T 1js3_A 389 EAFVLQDPRFEVCAEVTLGL-VCFRLKGSD----GLNEALLERINSA-RKIHLVPCRLRGQFVLRFAICSRKVESGHVRL 462 (486)
T ss_dssp HHHHHHCTTEEECSCCCSSE-EEEEESSCH----HHHHHHHHHHHHH-TSCBCEEEEETTEEEEEEECCCTTCCHHHHHH
T ss_pred HHHHhcCCCeEEeCCCceeE-EEEEecChH----HHHHHHHHHHHhc-CCEEEEEEEECCEEEEEEEeCCCCCCHHHHHH
Confidence 99999988888543455444 444554210 0135566666544 654333333444579999983 47899999
Q ss_pred HHHHHHHHHHHHHH
Q 014936 397 CLDRIKSFYQRHAK 410 (415)
Q Consensus 397 ~l~~l~~~~~~~~~ 410 (415)
++++|+++++++.+
T Consensus 463 ~~~~l~~~~~~~~~ 476 (486)
T 1js3_A 463 AWEHIRGLAAELLA 476 (486)
T ss_dssp HHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHh
Confidence 99999999877654
No 204
>2fq6_A Cystathionine beta-lyase; protein-inhibitor complex, PLP cofactor covalently bound to inhibitor; HET: P3F; 1.78A {Escherichia coli} SCOP: c.67.1.3 PDB: 2gqn_A* 1cl1_A* 1cl2_A*
Probab=99.95 E-value=7.9e-26 Score=213.86 Aligned_cols=214 Identities=13% Similarity=0.085 Sum_probs=160.2
Q ss_pred CCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHH----HhCCCeEEEee
Q 014936 77 AGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSA----AFRHIEVRHFD 152 (415)
Q Consensus 77 ~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~----~~~g~~~~~~~ 152 (415)
....++|+.+|++++ .++.++++|+++++++++.+++++||+|+++.+.|++....+ +..|+++..++
T Consensus 82 p~~~~le~~lA~l~g--------~~~~i~~ssGt~Ai~~al~~l~~~Gd~Vi~~~~~y~~~~~~~~~~l~~~G~~v~~v~ 153 (415)
T 2fq6_A 82 LTHFSLQQAMCELEG--------GAGCVLFPCGAAAVANSILAFIEQGDHVLMTNTAYEPSQDFCSKILSKLGVTTSWFD 153 (415)
T ss_dssp HHHHHHHHHHHHHHT--------CSEEEEESSHHHHHHHHHHTTCCTTCEEEEETTSCHHHHHHHHHTGGGGTCEEEEEC
T ss_pred chHHHHHHHHHHHhC--------CCeEEEeCCHHHHHHHHHHHHhCCCCEEEEeCCCchHHHHHHHHHHHHcCcEEEEEC
Confidence 346789999999882 346778899999999999999999999999999999877554 45789988886
Q ss_pred ccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhh--cCcEEEEccccCCcccCCCCcccccc
Q 014936 153 LLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANK--LKTLVIADEVYGHLVFGDKPFVPMGV 230 (415)
Q Consensus 153 ~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~--~~~~li~De~~~~~~~~~~~~~~~~~ 230 (415)
. .|++++++++++++++|++.+|+||+|.+.+ +++|+++|++ +|+++|+|++|+.+... .++ .
T Consensus 154 ~-------~d~~~le~ai~~~tklV~~e~~~NptG~v~d---l~~I~~la~~~~~g~~livD~a~a~~~~~----~p~-~ 218 (415)
T 2fq6_A 154 P-------LIGADIVKHLQPNTKIVFLESPGSITMEVHD---VPAIVAAVRSVVPDAIIMIDNTWAAGVLF----KAL-D 218 (415)
T ss_dssp T-------TCGGGGGGGCCTTEEEEEEESSCTTTCCCCC---HHHHHHHHHHHCTTCEEEEECTTTTTTSS----CGG-G
T ss_pred C-------CCHHHHHHhhccCCcEEEEECCCCCCCEeec---HHHHHHHHHhhcCCCEEEEECCCcccccC----Ccc-c
Confidence 4 2789999999999999999999999999975 7888888999 99999999999864321 122 2
Q ss_pred cCCCCCeEEEccCccccCCCCce-EEEEEeeCCCCCCChHHHHHHHHhhcc-ccCCchhHHHHHHHHhhCCCcHHHHHHH
Q 014936 231 FGSTVPILTLGSLSKRWIVPGWR-LGWFVTTDPCGMFRKPKVVERMKKYFD-ILGDPATFIQAAVPSILQQPDEVFFKKT 308 (415)
Q Consensus 231 ~~~~~~~i~~~s~sK~~~~~G~r-~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~ 308 (415)
++. .+++.|+||.++.+|.+ +||+++++ ++++.++.... .....++....++...+ +.+..+
T Consensus 219 ~g~---Div~~S~sK~lg~~g~~~~G~l~~~~--------~~~~~l~~~~~~~G~~~~~~~a~~~~~~l-----~~l~~r 282 (415)
T 2fq6_A 219 FGI---DVSIQAATKYLVGHSDAMIGTAVCNA--------RCWEQLRENAYLMGQMVDADTAYITSRGL-----RTLGVR 282 (415)
T ss_dssp GTC---SEEEEETTTTTTCSSSCCCEEEEECT--------TTHHHHHHHHHHTTCCCCHHHHHHHHHHH-----HHHHHH
T ss_pred cCC---eEEEEeCccccCCCCCceEEEEEeCH--------HHHHHHHHHHHhcCCCCCHHHHHHHHhhh-----hHHHHH
Confidence 333 38899999999888765 58888765 24455544432 22334554444444444 335666
Q ss_pred HHHHHHHHHHHHHHhhcCCCC
Q 014936 309 LNLLKQSVDICYNKIKEIPCI 329 (415)
Q Consensus 309 ~~~~~~~~~~l~~~l~~~~~~ 329 (415)
.++..+++..+.+.|++.|.+
T Consensus 283 ~~~~~~n~~~l~~~L~~~~~v 303 (415)
T 2fq6_A 283 LRQHHESSLKVAEWLAEHPQV 303 (415)
T ss_dssp HHHHHHHHHHHHHHHHTCTTE
T ss_pred HHHHHHHHHHHHHHHHcCCCe
Confidence 677777888888888776543
No 205
>3ke3_A Putative serine-pyruvate aminotransferase; structural genomi center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP; 2.20A {Psychrobacter arcticus 273-4}
Probab=99.95 E-value=4.1e-26 Score=214.54 Aligned_cols=298 Identities=11% Similarity=0.092 Sum_probs=207.4
Q ss_pred HHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchH--HHHHhCC--CeEEEeeccCC
Q 014936 81 LTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYE--LSAAFRH--IEVRHFDLLPD 156 (415)
Q Consensus 81 ~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~--~~~~~~g--~~~~~~~~~~~ 156 (415)
++.+.+++.+.+.+| .+ +.+++++|+++++++++..+ ++||+|++..++|++.. ..++..| .++..++.+..
T Consensus 35 ~~~~~~~~~l~~~~~--~~-~~v~~~~sgt~a~~~~~~~~-~~gd~vi~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 110 (379)
T 3ke3_A 35 EVMNDLLSNLKTVYN--AE-AAVIIPGSGTYGMEAVARQL-TIDEDCLIIRNGWFSYRWTQILEKGKFAKSSTVLTAERT 110 (379)
T ss_dssp HHHHHHHHHHHHHHT--CS-EEEEEESCHHHHHHHHHHHH-CTTCEEEEEECSHHHHHHHHHHHHHCCSSEEEEEECEES
T ss_pred HHHHHHHHHHHHHhC--CC-CEEEEcCChhHHHHHHHHhC-CCCCeEEEEeCCchhHHHHHHHHHhCCCCceEEEecccc
Confidence 344444444444333 23 68899999999999988665 69999999999998753 3455555 46777765421
Q ss_pred C------C-CCCChhHHHhhcC-CCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccc
Q 014936 157 K------G-WEVDLDDIESLAD-QNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPM 228 (415)
Q Consensus 157 ~------~-~~~~~~~l~~~~~-~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~ 228 (415)
+ . ..+|+++++++++ ++++++++++++||+|.+++.+++++|+++|+++|+++|+|++++ + + ....+
T Consensus 111 g~~~~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~~~~G~~~~~~~l~~i~~~~~~~~~~li~D~~~~-g---~-~~~~~ 185 (379)
T 3ke3_A 111 EDTEAPKPFAPVDIETAVAKIKEDKSAIVYAPHVETSSGIILSEEYIKALSEAVHSVGGLLVIDCIAS-G---C-VWLDM 185 (379)
T ss_dssp SCCSSCCCEECCCHHHHHHHHHHHTCSEEEEESEETTTTEECCHHHHHHHHHHHHHTTCEEEEECTTC-T---T-CCCCH
T ss_pred ccccccCCCCCCCHHHHHHHHhhcCCcEEEEEeecCCCceeCCHHHHHHHHHHHHHcCCEEEEEeccc-C---C-ccccc
Confidence 1 1 1479999999885 478899999999999999999999999999999999999999986 2 1 22223
Q ss_pred cccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhhc-----------------------cccCCc
Q 014936 229 GVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYF-----------------------DILGDP 285 (415)
Q Consensus 229 ~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~-----------------------~~~~~~ 285 (415)
..++.+ +++.|++|+++.+ ..+|++++++ ++++.+.... .+.+++
T Consensus 186 ~~~~~d---~~~~s~~K~l~~~-~g~g~~~~~~--------~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~t~ 253 (379)
T 3ke3_A 186 KELGID---VLISAPQKGWSST-PCAGLVMLSA--------AAIKKVESTESNCFSLDLKQWLTIMRAYENGGHAYHATM 253 (379)
T ss_dssp HHHTCS---EEEECTTTTTCSC-CCEEEEEECH--------HHHHHHHTCCCSCSTTCHHHHHHHHHHHHTTSCCCSSCC
T ss_pred cccCCC---EEEecchhhcCCC-CceEEEEECH--------HHHHhhhcCCCCceeecHHHHHHHHHhhhccCCCCCCCC
Confidence 333332 7788999986443 3489998864 4555543210 011366
Q ss_pred hhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCC---CceEEEEecCccccCCCCCHHHHHHH
Q 014936 286 ATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPE---GSMAVMLKLNLSLLDDIIDDIDFCFK 362 (415)
Q Consensus 286 ~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~---~g~~~~~~l~~~~~~~~~~~~~~~~~ 362 (415)
++..+.++.++|+...+..+++..++++++++++.+.|+++ ++.++ .+. .+....+..+. ....+ ..
T Consensus 254 ~~~~~~a~~aal~~~~~~g~~~~~~~~~~l~~~l~~~l~~~-g~~~~-~~~~~~~~~i~~~~~~~-------~~~~~-~~ 323 (379)
T 3ke3_A 254 PTDSLRQFRDAILEAKEIGFDILRDAQWELGNRVRKVLTDK-GIESV-AAEGFEAPGVVVSYTER-------DDMHK-GS 323 (379)
T ss_dssp CHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCBS-BCTTCBCSSEEEEECSC-------HHHHS-SH
T ss_pred CHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHc-CCEec-CCccccCceEEEEccCC-------cchHH-HH
Confidence 77777777777754333346788899999999999999988 77743 332 22223333321 11222 34
Q ss_pred HHhhcCeEEEcCCCCCC-----CCeEEEEee--CChhhHHHHHHHHHHHHHHHH
Q 014936 363 LAKEESVIILPGTAVGL-----KNWLRVTFA--VDPYSLEECLDRIKSFYQRHA 409 (415)
Q Consensus 363 ll~~~gi~v~~g~~~~~-----~~~iRi~~~--~~~~~l~~~l~~l~~~~~~~~ 409 (415)
.|.++||.+.+|..|.. .+.+||++. +++++++.++++|+++++++.
T Consensus 324 ~L~~~Gi~v~~g~~~~~~~~~~~~~lRis~~~~~t~~di~~~~~~l~~~l~~~~ 377 (379)
T 3ke3_A 324 AFAEAGLQIAAGVPLKVGEPDNFKTFRLGLFGLDKLTDIDGTVERFEKALDEVL 377 (379)
T ss_dssp HHHHTTCCCEECCCCSSCCCTTCCEEEEECCSHHHHTCHHHHHHHHHHHHHHHH
T ss_pred HHHHCCeEEeCCccccccccCcCCEEEEeCCcCCCHHHHHHHHHHHHHHHHHhc
Confidence 45678999999986543 579999994 688999999999999988764
No 206
>3vp6_A Glutamate decarboxylase 1; catalytic loop SWAP, lyase; HET: LLP HLD; 2.10A {Homo sapiens} PDB: 2okj_A* 2okk_A*
Probab=99.95 E-value=3e-25 Score=215.92 Aligned_cols=332 Identities=11% Similarity=0.057 Sum_probs=230.4
Q ss_pred HHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcC------------
Q 014936 55 HVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSR------------ 122 (415)
Q Consensus 55 ~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~------------ 122 (415)
..+.+.+...+.... ..|....+..++++.+++|+.+.+|.+.+++.+++|+|+|+++..++.++.+
T Consensus 110 ~~~~e~l~~~~~~~~-~~~~~~p~~~~le~~~~~~l~~~~g~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~G~~ 188 (511)
T 3vp6_A 110 GLAGEWLTSTANTNM-FTYEIAPVFVLMEQITLKKMREIVGWSSKDGDGIFSPGGAISNMYSIMAARYKYFPEVKTKGMA 188 (511)
T ss_dssp HHHHHHHHHHHCCCS-SCTTTCHHHHHHHHHHHHHHHHHHTCCSSSCEEEEESSHHHHHHHHHHHHHHHHCTHHHHHCGG
T ss_pred HHHHHHHHHHhccCC-CCcccCchHHHHHHHHHHHHHHHhCCCCCCCceEECCchHHHHHHHHHHHHHHhhhhhhhcCcc
Confidence 344566666665533 4777777889999999999999888776678999999999999998888754
Q ss_pred --CCCEEEEcCCCCcchHHHHHhCCC---eEEEeeccCCCCCCCChhHHHhhcCCC------ceEEEecCCCCccccCCC
Q 014936 123 --PGANILLPRPGFPIYELSAAFRHI---EVRHFDLLPDKGWEVDLDDIESLADQN------TVALVIINPGNPCGNVYS 191 (415)
Q Consensus 123 --~gd~vi~~~p~y~~~~~~~~~~g~---~~~~~~~~~~~~~~~~~~~l~~~~~~~------~~~v~i~~p~nptG~~~~ 191 (415)
+++.|+++.++|+++...++..|+ ++..++++ .++.+|+++|++++++. +++|++++|+||+|.+
T Consensus 189 ~~~~~~v~~s~~~H~s~~~~~~~~g~g~~~~~~v~~d--~~~~~d~~~Le~~i~~~~~~g~~~~~vv~~~~~~~~G~v-- 264 (511)
T 3vp6_A 189 AVPKLVLFTSEQSHYSIKKAGAALGFGTDNVILIKCN--ERGKIIPADFEAKILEAKQKGYVPFYVNATAGTTVYGAF-- 264 (511)
T ss_dssp GSCCEEEEEETTSCTHHHHHHHHTTSCGGGEEEECBC--TTSCBCHHHHHHHHHHHHHTTCEEEEEEEEBSCSSSCCB--
T ss_pred cCCCeEEEECCCchHHHHHHHHHcCCCCCcEEEeecC--CCCccCHHHHHHHHHHHHhcCCCcEEEEEecCCCCCccc--
Confidence 567899999999999999999998 88888875 34679999999998764 7889999999999999
Q ss_pred HHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcc-cccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHH
Q 014936 192 YQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFV-PMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPK 270 (415)
Q Consensus 192 ~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~-~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~ 270 (415)
+++++|+++|++||+++++|++|+.+........ .+..... -.+++.+++|+++.| ..+|+++++++.
T Consensus 265 -d~l~~I~~ia~~~~~~lhvD~a~~~~~~~~~~~~~~~~g~~~--aDsv~~~~hK~l~~p-~g~g~l~~~~~~------- 333 (511)
T 3vp6_A 265 -DPIQEIADICEKYNLWLHVDAAWGGGLLMSRKHRHKLNGIER--ANSVTWNPHKMMGVL-LQCSAILVKEKG------- 333 (511)
T ss_dssp -CCHHHHHHHHHHHTCEEEEEETTGGGGGGCTTTGGGGTTGGG--CSEEEECTTSTTCCC-SCCEEEEESSTT-------
T ss_pred -ccHHHHHHHHHHcCCEEEEEccchhhHhhChhhhhhccCCcc--CCEEEECcccccCCC-cCeEEEEEeCHH-------
Confidence 7799999999999999999999998665322111 1111111 125667999997655 568999887633
Q ss_pred HHHHHHhh-c-cc----------------c----CCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCC
Q 014936 271 VVERMKKY-F-DI----------------L----GDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPC 328 (415)
Q Consensus 271 ~~~~~~~~-~-~~----------------~----~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~ 328 (415)
+.+..... . .. + .....+...++...+ ..++++++.++..++++++.+.|+++|+
T Consensus 334 ~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~r~~~al~~~~al~~~---g~~gl~~~~~~~~~~a~~l~~~L~~~pg 410 (511)
T 3vp6_A 334 ILQGCNQMHASYLFQQDKHYDVSYDTGDKAIQCGRHVDIFKFWLMWKAK---GTVGFENQINKCLELAEYLYAKIKNREE 410 (511)
T ss_dssp HHHHHHCCCCTTTCCSSCSSCGGGCCGGGSSCSSCCCCHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHSCTT
T ss_pred HHHHHhccCCccccCcccccccccCccCCCCCCCCchHHHHHHHHHHHH---hHHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 33332110 0 00 0 001233334444444 3478899999999999999999999999
Q ss_pred CcCCC--CCCCceEEEEecCccccCCCCC-----------HHHHHHHHHhhcCeEEEcCCC-CCCCCeEEEEee---CCh
Q 014936 329 ISCPH--KPEGSMAVMLKLNLSLLDDIID-----------DIDFCFKLAKEESVIILPGTA-VGLKNWLRVTFA---VDP 391 (415)
Q Consensus 329 ~~~~~--~p~~g~~~~~~l~~~~~~~~~~-----------~~~~~~~ll~~~gi~v~~g~~-~~~~~~iRi~~~---~~~ 391 (415)
++++. .|..+.+.|...+. ...+..+ ..++...+. +.|+.+..... .+..+++|++++ ++.
T Consensus 411 ~~l~~~~~p~~~~v~f~~~p~-~~~~~~~~~~~~~~l~~~~~~l~~~L~-~~G~~~~~~~~~~~~~~~lRi~~~~~~~t~ 488 (511)
T 3vp6_A 411 FEMVFNGEPEHTNVCFWYIPQ-SLRGVPDSPQRREKLHKVAPKIKALMM-ESGTTMVGYQPQGDKANFFRMVISNPAATQ 488 (511)
T ss_dssp EEESSSSCCSSSCEEEEECCG-GGSSCCCCHHHHHHHHHHHHHHHHHHH-HHTSCEEEEEEETTEEEEEEECCCCTTCCH
T ss_pred EEEEecCCCCeEEEEEEEeCc-cccccccchhHHHHHHHHHHHHHHHHH-hcCCEEEEEEEeCCceEEEEEEecCCCCCH
Confidence 98553 35555544432232 1111000 124555554 45654433111 111357999983 578
Q ss_pred hhHHHHHHHHHHHHHH
Q 014936 392 YSLEECLDRIKSFYQR 407 (415)
Q Consensus 392 ~~l~~~l~~l~~~~~~ 407 (415)
++++.+++.|+++.+.
T Consensus 489 ~di~~ll~~i~~~~~~ 504 (511)
T 3vp6_A 489 SDIDFLIEEIERLGQD 504 (511)
T ss_dssp HHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHHHHHh
Confidence 9999999999887654
No 207
>3nmy_A Xometc, cystathionine gamma-lyase-like protein; Cys-Met metabolism PLP-dependent enzyme family, CYST gamma lyase, pyridoxal-phosphate; HET: PLP; 2.07A {Xanthomonas oryzae PV} SCOP: c.67.1.0 PDB: 3e6g_A* 3nnp_A*
Probab=99.94 E-value=2.4e-25 Score=209.75 Aligned_cols=288 Identities=15% Similarity=0.101 Sum_probs=201.9
Q ss_pred CCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHH-----hCCC
Q 014936 72 GYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAA-----FRHI 146 (415)
Q Consensus 72 ~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~-----~~g~ 146 (415)
+|++ +...+|++.++++. ..++.+++++|++|+.. +..++++||+|+++.|+|++....+. ..|+
T Consensus 63 r~~~-p~~~~l~~~la~l~--------g~~~~~~~~sG~~Ai~~-~~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~ 132 (400)
T 3nmy_A 63 RTHN-PTRFAYERCVAALE--------GGTRAFAFASGMAATST-VMELLDAGSHVVAMDDLYGGTFRLFERVRRRTAGL 132 (400)
T ss_dssp TTCC-HHHHHHHHHHHHHH--------TCSEEEEESSHHHHHHH-HHTTSCTTCEEEEESSCCHHHHHHHHHTHHHHHCC
T ss_pred cCCC-HHHHHHHHHHHHHh--------CCCCEEEecCHHHHHHH-HHHHcCCCCEEEEeCCCchHHHHHHHHhhHhhcCe
Confidence 4443 34578888888887 23477788888999998 56788999999999999996665543 3599
Q ss_pred eEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcc
Q 014936 147 EVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFV 226 (415)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~ 226 (415)
++..++.+ |++++++++++++++|++++|+||+|.+++ +++|+++|+++|+++|+|++|+...+. .
T Consensus 133 ~~~~v~~~-------d~~~l~~~i~~~~~~v~~e~~~np~G~~~~---l~~i~~la~~~g~~livDe~~~~~~~~----~ 198 (400)
T 3nmy_A 133 DFSFVDLT-------DPAAFKAAIRADTKMVWIETPTNPMLKLVD---IAAIAVIARKHGLLTVVDNTFASPMLQ----R 198 (400)
T ss_dssp EEEEECTT-------SHHHHHHHCCTTEEEEEEESSCTTTCCCCC---HHHHHHHHHHTTCEEEEECTTTHHHHC----C
T ss_pred EEEEECCC-------CHHHHHHHhccCCCEEEEECCCCCCCeeec---HHHHHHHHHHcCCEEEEECCCcccccC----C
Confidence 98888752 799999999999999999999999999975 888899999999999999999854322 1
Q ss_pred cccccCCCCCeEEEccCccccCCCCceEEE--EEeeCCCCCCChHHHHHHHHhhc-cccCCchhHHHHHHHHhhCCCcHH
Q 014936 227 PMGVFGSTVPILTLGSLSKRWIVPGWRLGW--FVTTDPCGMFRKPKVVERMKKYF-DILGDPATFIQAAVPSILQQPDEV 303 (415)
Q Consensus 227 ~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~--~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~a~~~~l~~~~~~ 303 (415)
++ .++ ..+++.|+||.++.+|.++|+ +++.+ +++.+.+.... ..+...++....++...++.
T Consensus 199 ~~-~~g---~div~~S~sK~l~g~g~~~gG~~vv~~~-------~~~~~~l~~~~~~~g~~~~~~~a~~~l~~l~~---- 263 (400)
T 3nmy_A 199 PL-SLG---ADLVVHSATKYLNGHSDMVGGIAVVGDN-------AELAEQMAFLQNSIGGVQGPFDSFLALRGLKT---- 263 (400)
T ss_dssp GG-GGT---CSEEEEETTTTTTCSSSCCCEEEEECSC-------HHHHHHHHHHHHHHCCBCCHHHHHHHHHHHTT----
T ss_pred hh-hcC---CcEEEecCccccCCCCCcceeEEEEeCC-------HHHHHHHHHHHHhcCCCCCHHHHHHHHHhHhH----
Confidence 11 122 238899999999888888766 44433 35777776553 23455677777777777764
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCC----------------CceEEEEecCccccCCCCCHHHHHHHHHhhc
Q 014936 304 FFKKTLNLLKQSVDICYNKIKEIPCISCPHKPE----------------GSMAVMLKLNLSLLDDIIDDIDFCFKLAKEE 367 (415)
Q Consensus 304 ~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~----------------~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~ 367 (415)
+..+.++..+++..+.+.|++.|.+..+.+|. .|.+++++++... .....++.. ++-.
T Consensus 264 -l~~r~~~~~~~a~~l~~~L~~~p~v~~V~~p~l~~~~~~~~~~~~~~g~G~~~~~~l~~~~----~~~~~~~~~-l~~~ 337 (400)
T 3nmy_A 264 -LPLRMRAHCENALALAQWLETHPAIEKVIYPGLASHPQHVLAKRQMSGFGGIVSIVLKGGF----DAAKRFCEK-TELF 337 (400)
T ss_dssp -HHHHHHHHHHHHHHHHHHHTTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEETTHH----HHHHHHHHH-CSSS
T ss_pred -HHHHHHHHHHHHHHHHHHHHcCCCEeEEECCCCCCCcCHHHHHHhCCCCCceEEEEeCCcH----HHHHHHHHc-CCcc
Confidence 56677788888999999998877665343442 3678888885310 012233333 2334
Q ss_pred CeEEEcCCCCC-----------------------CCCeEEEEeeCChhhHHHHHHHHHHHHH
Q 014936 368 SVIILPGTAVG-----------------------LKNWLRVTFAVDPYSLEECLDRIKSFYQ 406 (415)
Q Consensus 368 gi~v~~g~~~~-----------------------~~~~iRi~~~~~~~~l~~~l~~l~~~~~ 406 (415)
++.++.|..+. .++.+|+|++.. +.+.+++.|+++++
T Consensus 338 ~~~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liRlsvGle--~~~dli~dl~~al~ 397 (400)
T 3nmy_A 338 TLAESLGGVESLVNHPAVMTHASIPVARREQLGISDALVRLSVGIE--DLGDLRGDLERALV 397 (400)
T ss_dssp EECSCCCSSSCEEECTTTTTTTTSCHHHHHHHTCCTTEEEEECCSS--CHHHHHHHHHHHHC
T ss_pred eEecCCCCCcceeeCccccccccCCHHHHHhcCCCcCeEEEEeCcC--CHHHHHHHHHHHHh
Confidence 44445554321 146899999863 44455566666664
No 208
>3bb8_A CDP-4-keto-6-deoxy-D-glucose-3-dehydrase; aspartate aminotransferase fold, oxidoreductase; HET: PLP; 2.35A {Yersinia pseudotuberculosis} PDB: 3bcx_A
Probab=99.94 E-value=3.8e-25 Score=211.90 Aligned_cols=311 Identities=16% Similarity=0.097 Sum_probs=213.7
Q ss_pred cHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHh---------cCCC
Q 014936 54 THVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALL---------SRPG 124 (415)
Q Consensus 54 ~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l---------~~~g 124 (415)
.+++.+++.+.+... .|.+..+..++|+.++++++ .++++++++|++++.+++.++ .++|
T Consensus 42 ~~~~~~a~~~~~~~~---~~~~~~~~~~l~~~la~~~g--------~~~~i~~~sGt~a~~~al~~l~~~~~~~~~~~~g 110 (437)
T 3bb8_A 42 GTKELQLMVEASLDG---WLTTGRFNDAFEKKLGEYLG--------VPYVLTTTSGSSANLLALTALTSPKLGVRALKPG 110 (437)
T ss_dssp CHHHHHHHHHHHHHC---CCBSCHHHHHHHHHHHHHHT--------CSEEEEESCHHHHHHHHHHHTTCGGGGGGSCCTT
T ss_pred CHHHHHHHHHHHHcC---CcCCChHHHHHHHHHHHHHC--------CCcEEEeCCHHHHHHHHHHHhhhcccccccCCCc
Confidence 478888888887642 24444578999999999993 237888888899999999998 7899
Q ss_pred CEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhh
Q 014936 125 ANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANK 204 (415)
Q Consensus 125 d~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~ 204 (415)
|+|+++.|+|+.+...+...|++++.+++++ +++.+|++++++++++++++|++++ ++|.. .++++|.++|++
T Consensus 111 d~Vi~~~~~~~~~~~~~~~~g~~~~~v~~~~-~~~~~d~~~l~~~i~~~~~~v~~~~---~~g~~---~~~~~i~~l~~~ 183 (437)
T 3bb8_A 111 DEVITVAAGFPTTVNPTIQNGLIPVFVDVDI-PTYNVNASLIEAAVSDKTKAIMIAH---TLGNL---FDLAEVRRVADK 183 (437)
T ss_dssp CEEEECSSSCHHHHHHHHHTTCEEEECCEET-TTTEECGGGHHHHCCTTEEEEEEEC---GGGCC---CCHHHHHHHHHH
T ss_pred CEEEECCCCcHHHHHHHHHcCCEEEEEeccC-ccCCcCHHHHHHhcCCCCeEEEEeC---CCCCh---hcHHHHHHHHHH
Confidence 9999999999999999999999999998864 2567899999999988899998875 23433 468899999999
Q ss_pred cCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhhccc---
Q 014936 205 LKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDI--- 281 (415)
Q Consensus 205 ~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~--- 281 (415)
+|+++|+|++|+.+.... ...++...+ +++.||+|.++++|.+.|+++++++ .+.+.++.....
T Consensus 184 ~~~~li~D~a~~~g~~~~-----~~~~~~~~d-~~~~s~~~~k~l~~g~gg~~~~~~~-------~~~~~~~~~~~~~~~ 250 (437)
T 3bb8_A 184 YNLWLIEDCCDALGSTYD-----GKMAGTFGD-IGTVSFYPAKHITMGEGGAVFTQSA-------ELKSIIESFRDWGRD 250 (437)
T ss_dssp HTCEEEEECTTCTTCEET-----TEETTSSSS-EEEEECSTTSSSCCSSCEEEEESCH-------HHHHHHHHHHBTTBC
T ss_pred cCCEEEEECccccCceEC-----CeecccccC-EEEEECcCCcCCCCCCeEEEEeCCH-------HHHHHHHHHHHhCcc
Confidence 999999999998543211 111221111 6677888888889999999998651 122222211000
Q ss_pred -------------------------------------cCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhh
Q 014936 282 -------------------------------------LGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIK 324 (415)
Q Consensus 282 -------------------------------------~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~ 324 (415)
+...+.+...++...|+ .+++..++.+++++++.+.|+
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~l~~l~-----~~~~~~~~~~~~~~~l~~~L~ 325 (437)
T 3bb8_A 251 CYCAPGCDNTCKKRFGQQLGSLPFGYDHKYTYSHLGYNLKITDMQAACGLAQLE-----RIEEFVEKRKANFKYLKDALQ 325 (437)
T ss_dssp C----------------CCSCCCTTCCGGGCBCSCCCBCCCBHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHGG
T ss_pred cccccccccccccccccccccccccccccccccccCcccCCCHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHhh
Confidence 01123444444444443 235555666788889999998
Q ss_pred cCCCCcCCCCC------CCceEEE-EecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCC------------------
Q 014936 325 EIPCISCPHKP------EGSMAVM-LKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGL------------------ 379 (415)
Q Consensus 325 ~~~~~~~~~~p------~~g~~~~-~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~------------------ 379 (415)
+++++..+... ....|.+ +..+. + .+..++...| .++||.++++.....
T Consensus 326 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~----~-~~~~~l~~~L-~~~GI~v~~~~~~~~~~~p~~~~~~~~~~~~~~ 399 (437)
T 3bb8_A 326 SCADFIELPEATENSDPSWFGFPITLKEDS----G-VSRIDLVKFL-DEAKVGTRLLFAGNLTRQPYFHDVKYRVVGELT 399 (437)
T ss_dssp GGTTTEECCCCCTTEECCCSSEEEEECGGG----S-SCHHHHHHHH-HHTTBCCBCCTTSSGGGSGGGSSCCCEECSCCH
T ss_pred ccCCccccCCCCCCCceeeEEEEEEECCcC----c-CcHHHHHHHH-HHCCCceeccCCcccccCchhhccCccccCCCc
Confidence 88665422111 1112333 33321 1 1455666665 567999987754110
Q ss_pred ------CCeEEEEee--CChhhHHHHHHHHHHHHH
Q 014936 380 ------KNWLRVTFA--VDPYSLEECLDRIKSFYQ 406 (415)
Q Consensus 380 ------~~~iRi~~~--~~~~~l~~~l~~l~~~~~ 406 (415)
.+.+|+++. +++++++.+++.|+++++
T Consensus 400 ~~~~~~~~~lrl~~~~~~t~~di~~i~~~l~~~~~ 434 (437)
T 3bb8_A 400 NTDRIMNQTFWIGIYPGLTHDHLDYVVSKFEEFFG 434 (437)
T ss_dssp HHHHHHHHEEEECCSTTCCHHHHHHHHHHHHHHTT
T ss_pred HHHHHhcCEEEecCCCCCCHHHHHHHHHHHHHHHc
Confidence 124899984 689999999999988754
No 209
>2a7v_A Serine hydroxymethyltransferase; structural genomics, structural genomics consortium, SGC; 2.04A {Homo sapiens} PDB: 3ou5_A
Probab=99.94 E-value=5.2e-25 Score=211.02 Aligned_cols=344 Identities=15% Similarity=0.079 Sum_probs=210.1
Q ss_pred ceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCC------CCCcHHHHHHHHHHHhhhCCCCCCCC---cEEEe
Q 014936 36 KVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAP------TAGLPLTRRAIAEYLSRDLPYKLTPN---DVFVT 106 (415)
Q Consensus 36 ~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~------~~g~~~lr~~ia~~~~~~~~~~~~~~---~i~i~ 106 (415)
..+.|-.+. ..++++|++++.+.+.+....+|+. .....++++...+++++.+| .+.+ ..+++
T Consensus 55 ~~i~lias~------n~~~~~V~eA~~~~l~~~y~~G~~g~r~~~G~~~~~~lE~~a~~~~a~l~g--~~~~~~~~~v~~ 126 (490)
T 2a7v_A 55 RGLELIASE------NFCSRAALEALGSCLNNKYSEGYPGKRYYGGAEVVDEIELLCQRRALEAFD--LDPAQWGVNVQP 126 (490)
T ss_dssp HSEECCTTC------CCCCHHHHHHHTSGGGTCCCCC------------CTHHHHHHHHHHHHHTT--CCTTTEEEECCC
T ss_pred cCceEECCC------CCCCHHHHHHHHHHHcCCCccCCCcccccCccHHHHHHHHHHHHHHHHHcC--CCcccCceEEeC
Confidence 456666543 3468999999988776433223331 12234666333344433333 3443 23556
Q ss_pred CChHHHHHHHHHHhcCCCCEEEEcCCCCcchHH--------HHHhCCCe--EEEeeccCCCCCCCChhHHHhhcCC-Cce
Q 014936 107 SGCTQAIDVAMALLSRPGANILLPRPGFPIYEL--------SAAFRHIE--VRHFDLLPDKGWEVDLDDIESLADQ-NTV 175 (415)
Q Consensus 107 ~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~--------~~~~~g~~--~~~~~~~~~~~~~~~~~~l~~~~~~-~~~ 175 (415)
+||++|+.+++.+++++||+|+++++.|.++.. .+...|.. +..+++++ .++.+|++++++.+++ +++
T Consensus 127 ~sGt~An~~al~al~~pGD~Vl~~~~~h~g~l~h~~~~~~~~i~~~g~~~~~~~~~vd~-~~~~iD~d~le~~l~~~~~k 205 (490)
T 2a7v_A 127 YSGSPANLAVYTALLQPHDRIMGLDLPDGGHLTHGYMSDVKRISATSIFFESMPYKLNP-KTGLIDYNQLALTARLFRPR 205 (490)
T ss_dssp SSHHHHHHHHHHHHCCSCEECCC-------------------------------CCBCT-TTCSBCHHHHHHHHHHHCCS
T ss_pred CchHHHHHHHHHHHcCCCCEecccCccccccccchhhhcchhHHHcCCeEEEEeccccc-ccCCcCHHHHHHHHhhcCCc
Confidence 688999999999999999999999999865421 12334543 33444443 3467999999998853 678
Q ss_pred EEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCc-ccCCCCcccccccCCCCCeEEEccCccccCCCCceE
Q 014936 176 ALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHL-VFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRL 254 (415)
Q Consensus 176 ~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~-~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~ 254 (415)
+++++.|+||+ . .++++|.++|+++|+++++|++|... ...+..+.++. .. .+++.|+||++ .|.|.
T Consensus 206 lIi~~~s~~~~--~---~dl~~i~~ia~~~g~~livD~Ah~~glv~~g~~~~~~~--~a---Div~~S~hK~l--~Gp~G 273 (490)
T 2a7v_A 206 LIIAGTSAYAR--L---IDYARMREVCDEVKAHLLADMAHISGLVAAKVIPSPFK--HA---DIVTTTTHKTL--RGARS 273 (490)
T ss_dssp EEEECCSSCCS--C---CCHHHHHHHHHHTTCEEEEECGGGHHHHHTTSSCCGGG--TC---SEEEEESSGGG--CSCSC
T ss_pred EEEEcCCCCCC--c---ccHHHHHHHHHHcCCEEEEccccccccccCCcCCCCCC--CC---CEEEECCcccC--ccccc
Confidence 88888888875 3 24889999999999999999998643 33343333332 11 27788999985 46677
Q ss_pred EEEEeeCCCCCCChH--------HHHHHHHhhcc--ccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhh
Q 014936 255 GWFVTTDPCGMFRKP--------KVVERMKKYFD--ILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIK 324 (415)
Q Consensus 255 G~~~~~~~~~~~~~~--------~~~~~~~~~~~--~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~ 324 (415)
|++++++..... ++ ++.+.++.... ..++++.....++..++.......+++..+++.++++++.+.|.
T Consensus 274 G~i~~~~~~~~~-~~~~~~~~~~~l~~~i~~~~~~g~qggp~~~~iaAla~Al~~~~~~~~~~~~~~~~~na~~L~~~L~ 352 (490)
T 2a7v_A 274 GLIFYRKGVKAV-DPKTGREIPYTFEDRINFAVFPSLQGGPHNHAIAAVAVALKQACTPMFREYSLQVLKNARAMADALL 352 (490)
T ss_dssp EEEEEECSEEEE-ETTTEEEEECCCHHHHHHHHTTTTCCSCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hheeeccchhcc-cccccchhhHHHHHHHHHHhcccCCCCchHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHH
Confidence 999997631000 00 14455554422 12334444455555454432223457888999999999999999
Q ss_pred cCCCCcCCCCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCC-----CCCeEEEEe------eCChhh
Q 014936 325 EIPCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVG-----LKNWLRVTF------AVDPYS 393 (415)
Q Consensus 325 ~~~~~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~-----~~~~iRi~~------~~~~~~ 393 (415)
+. |+.++..+...+++|+.+.... . +..+ +...|++.||.+..+..++ .++.||++. +.++++
T Consensus 353 ~~-G~~v~~~~t~t~lv~vdl~~~g---~-~~~~-~~~~L~~~GI~v~~~~~p~d~~p~~~~~iRig~~a~t~~g~~~~d 426 (490)
T 2a7v_A 353 ER-GYSLVSGGTDNHLVLVDLRPKG---L-DGAR-AERVLELVSITANKNTCPGDRSAITPGGLRLGAPALTSRQFREDD 426 (490)
T ss_dssp HT-TCEEGGGSCSSSEEEEECTTTT---C-CHHH-HHHHHHHTTEECEEECCTTCCCSSSCSEEEEESHHHHHTTCCHHH
T ss_pred Hc-CcEEecCCCCCeEEEEEeCCCC---C-CHHH-HHHHHHhCCeEEecCccCCCCCCCCCCceEecccccccCCCCHHH
Confidence 87 7874322345678888876421 1 3444 4556678899998654433 257899987 247899
Q ss_pred HHHHHHHHHHHHHH
Q 014936 394 LEECLDRIKSFYQR 407 (415)
Q Consensus 394 l~~~l~~l~~~~~~ 407 (415)
++++++.|.++++.
T Consensus 427 ~~~~~~~i~~~l~~ 440 (490)
T 2a7v_A 427 FRRVVDFIDEGVNI 440 (490)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh
Confidence 99999999888764
No 210
>4e1o_A HDC, histidine decarboxylase; lyase; HET: PLP PVH; 1.80A {Homo sapiens}
Probab=99.94 E-value=4.2e-25 Score=213.65 Aligned_cols=331 Identities=10% Similarity=0.029 Sum_probs=232.4
Q ss_pred cHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCC--------CcEEEeCChHHHHHHHHHHhcC---
Q 014936 54 THVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTP--------NDVFVTSGCTQAIDVAMALLSR--- 122 (415)
Q Consensus 54 ~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~--------~~i~i~~g~~~al~~~~~~l~~--- 122 (415)
+..+.+.+...+... ...|....+..++++.+++|+.+.+|.+... ...++|+|+|+++..++.+..+
T Consensus 92 ~~~~~~~~~~~~n~~-~~~~~~~p~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~~~~g~~~~ggt~an~~al~~ar~~~~ 170 (481)
T 4e1o_A 92 PSLLGDMLADAINCL-GFTWASSPACTELEMNVMDWLAKMLGLPEHFLHHHPSSQGGGVLQSTVSESTLIALLAARKNKI 170 (481)
T ss_dssp HHHHHHHHHHHHCCC-CSSTTTCHHHHHHHHHHHHHHHHHHTCCGGGCTTCTTCBCEEEEESCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCcc-cCCcCCCcHHHHHHHHHHHHHHHHhCCChhhhccccCCCCceEEeCchHHHHHHHHHHHHHHHH
Confidence 345556666666553 3467776788999999999999988765322 3679999999999988887642
Q ss_pred ----------------CCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCC------ceEEEec
Q 014936 123 ----------------PGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQN------TVALVII 180 (415)
Q Consensus 123 ----------------~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~------~~~v~i~ 180 (415)
+++.|+++.++|.++...++..|.+++.++++ .++.+|+++|+++++++ +.+|+.+
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~~~~~~g~~~~~v~~~--~~~~~d~~~Le~~i~~~~~~g~~~~~vv~~ 248 (481)
T 4e1o_A 171 LEMKTSEPDADESSLNARLVAYASDQAHSSVEKAGLISLVKMKFLPVD--DNFSLRGEALQKAIEEDKQRGLVPVFVCAT 248 (481)
T ss_dssp HHHHHHCTTSCHHHHHTTEEEEEETTSCHHHHHHHHHHTCEEEEECCC--TTSCCCHHHHHHHHHHHHHTTCEEEEEEEE
T ss_pred HHhhhcCcccccccccCCeEEEEcCcchHHHHHHHHhCCCceEEEEcC--CCCcCCHHHHHHHHHHHHhCCCCcEEEEEe
Confidence 46799999999999999999999999999874 45679999999998654 5678888
Q ss_pred CCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCccc-ccccCCCCCeEEEccCccccCCCCceEEEEEe
Q 014936 181 NPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVP-MGVFGSTVPILTLGSLSKRWIVPGWRLGWFVT 259 (415)
Q Consensus 181 ~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~-~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~ 259 (415)
.++|++|.+ +++++|+++|++||+++++|++|+.+.+....... +..+... ..+..+++|+++.| ..+|++++
T Consensus 249 ~~~t~~G~i---d~l~~I~~la~~~~~~lhvDaA~g~~~~~~~~~~~~~~gi~~a--Dsi~~~~hK~l~~p-~g~g~l~~ 322 (481)
T 4e1o_A 249 LGTTGVCAF---DCLSELGPICAREGLWLHIDAAYAGTAFLCPEFRGFLKGIEYA--DSFTFNPSKWMMVH-FDCTGFWV 322 (481)
T ss_dssp BSCTTTCCB---CCHHHHHHHHHHHTCEEEEECTTGGGGGGSGGGGGGGTTGGGC--SEEEECHHHHSSCC-SSCEEEEE
T ss_pred cCCCCCcCc---CCHHHHHHHHHHcCCeEEeehhhHHHHHhChhhHHHhcCcccC--CEEEEChHHhcCCC-CceEEEEE
Confidence 999999988 77999999999999999999999886533221111 1111111 14556899986654 44788877
Q ss_pred eCCCCCCChHHHHH-HHHhhc-cc------------------cCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHH
Q 014936 260 TDPCGMFRKPKVVE-RMKKYF-DI------------------LGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDIC 319 (415)
Q Consensus 260 ~~~~~~~~~~~~~~-~~~~~~-~~------------------~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l 319 (415)
+++ .... .+.... .. +.....+.+.++...+. .+.++++.++..++++++
T Consensus 323 ~~~-------~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~r~~~~l~~~~al~~~g---~~g~~~~~~~~~~~a~~l 392 (481)
T 4e1o_A 323 KDK-------YKLQQTFSVNPIYLRHANSGVATDFMHWQIPLSRRFRSVKLWFVIRSFG---VKNLQAHVRHGTEMAKYF 392 (481)
T ss_dssp SBH-------HHHHTTTCCCCGGGCCTTTTTSCCGGGGSSSSCCCCTHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHH
T ss_pred eCH-------HHHHHHhcCCchhccCcccCCCCCcccccccCCCCccHHHHHHHHHHhH---HHHHHHHHHHHHHHHHHH
Confidence 652 2221 110000 00 00112344455544442 467889999999999999
Q ss_pred HHHhhcCCCCcCCCCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEee---CChhhHHH
Q 014936 320 YNKIKEIPCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFA---VDPYSLEE 396 (415)
Q Consensus 320 ~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~---~~~~~l~~ 396 (415)
.+.|+++|+++++ .+....+++++++... ....++...+.++..+.+.|+... ...++|+++. +++++++.
T Consensus 393 ~~~L~~~~g~~~~-~~~~~~~v~f~~~~~~----~~~~~l~~~L~~~g~~~~~~~~~~-g~~~lR~~~~~~~tt~~di~~ 466 (481)
T 4e1o_A 393 ESLVRNDPSFEIP-AKRHLGLVVFRLKGPN----SLTENVLKEIAKAGRLFLIPATIQ-DKLIIRFTVTSQFTTRDDILR 466 (481)
T ss_dssp HHHHHTCTTEECC-SCCCSSEEEEEESSCH----HHHHHHHHHHHHHCSSBCEEEEET-TEEEEEEECCCTTCCHHHHHH
T ss_pred HHHHhcCCCeEEe-cCCceeEEEEEeCCch----HHHHHHHHHHHhCCeEEEEeeEEC-CEEEEEEEeCCCCCCHHHHHH
Confidence 9999999999854 5555667777774310 124566677655533555554332 2468999984 37899999
Q ss_pred HHHHHHHHHHHHH
Q 014936 397 CLDRIKSFYQRHA 409 (415)
Q Consensus 397 ~l~~l~~~~~~~~ 409 (415)
++++|+++++++.
T Consensus 467 ~~~~i~~~~~~l~ 479 (481)
T 4e1o_A 467 DWNLIRDAATLIL 479 (481)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh
Confidence 9999999987754
No 211
>3k40_A Aromatic-L-amino-acid decarboxylase; PLP dependent protein, alpha beta protein, alternative splicing, catecholamine biosynthesis, lyase; HET: LLP; 1.75A {Drosophila melanogaster} SCOP: c.67.1.6
Probab=99.94 E-value=4.8e-25 Score=212.70 Aligned_cols=337 Identities=9% Similarity=0.015 Sum_probs=230.0
Q ss_pred HHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCC-------CcEEEeCChHHHHHHHHHHhcC-----
Q 014936 55 HVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTP-------NDVFVTSGCTQAIDVAMALLSR----- 122 (415)
Q Consensus 55 ~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~-------~~i~i~~g~~~al~~~~~~l~~----- 122 (415)
..+.+.+...+... ...|....+..++++.+++|+.+.+|.+... ...++|+|+|+++..++.+..+
T Consensus 88 ~~~~~~l~~~~n~~-~~~~~~~p~~~~lE~~v~~~l~~~~g~~~~~~~~~~~~~~gv~t~ggt~anl~al~~ar~~~~~~ 166 (475)
T 3k40_A 88 AIVADMLSGAIACI-GFTWIASPACTELEVVMMDWLGKMLELPAEFLACSGGKGGGVIQGTASESTLVALLGAKAKKLKE 166 (475)
T ss_dssp HHHHHHHHHHHCCC-SSSCCCCHHHHHHHHHHHHHHHHHTTCCGGGCGGGTSSCEEEEESCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCcc-ccCccCCcHHHHHHHHHHHHHHHHhCCCchhccccCCCCCeEEcCchHHHHHHHHHHHHHHHHHH
Confidence 44555566666543 3467766788999999999999988865321 3689999999999888877631
Q ss_pred --------------CCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCC------ceEEEecCC
Q 014936 123 --------------PGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQN------TVALVIINP 182 (415)
Q Consensus 123 --------------~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~------~~~v~i~~p 182 (415)
+++.|+++.++|.++...++..|++++.++++ .++ +|+++|+++++++ +.+|+++.+
T Consensus 167 ~~~~~~~~~~~~~~~~~~vi~s~~~H~s~~~~~~~~g~~~~~v~~d--~~~-~d~~~L~~~i~~~~~~~~~~~~v~~~~~ 243 (475)
T 3k40_A 167 VKELHPEWDEHTILGKLVGYCSDQAHSSVERAGLLGGVKLRSVQSE--NHR-MRGAALEKAIEQDVAEGLIPFYAVVTLG 243 (475)
T ss_dssp HHHHCTTSCHHHHHHHEEEEEETTSCHHHHHHHHHHTCEEEEECCB--TTB-CCHHHHHHHHHHHHHTTCEEEEEEEEBS
T ss_pred hhccCcccccccccCCeEEEECCCchHHHHHHHHHcCCceEEEECC--CCC-cCHHHHHHHHHHHHHCCCccEEEEEEec
Confidence 24689999999999999999999999999985 345 9999999998754 567888999
Q ss_pred CCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCccc-ccccCCCCCeEEEccCccccCCCCceEEEEEeeC
Q 014936 183 GNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVP-MGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTD 261 (415)
Q Consensus 183 ~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~-~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~ 261 (415)
+|++|.+ +++++|+++|+++|+++++|++|+.+.+....... +..+.. -..+..+++|+++.| ..+|++++++
T Consensus 244 ~t~~G~~---~~l~~I~~la~~~~~~lhvD~A~~~~~~~~~~~~~~~~gi~~--~Ds~~~~~hK~l~~p-~g~g~l~~~~ 317 (475)
T 3k40_A 244 TTNSCAF---DYLDECGPVGNKHNLWIHVDAAYAGSAFICPEYRHLMKGIES--ADSFNFNPHKWMLVN-FDCSAMWLKD 317 (475)
T ss_dssp CTTTCCB---CCHHHHHHHHHHTTCEEEEECTTGGGGGGSGGGGGGGTTGGG--CSEEEECHHHHSSCC-SSCEEEEESS
T ss_pred CCCCcCc---CCHHHHHHHHHHhCCeEEEeHHhHHHHHhCHhhHHHhcCccc--CCEEEECchhccCCC-CceEEEEEeC
Confidence 9999998 77899999999999999999999875432211111 111111 125667899985443 4588888876
Q ss_pred CCCCCC----hHHHHHHHH-----hhcccc--CC--chhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCC
Q 014936 262 PCGMFR----KPKVVERMK-----KYFDIL--GD--PATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPC 328 (415)
Q Consensus 262 ~~~~~~----~~~~~~~~~-----~~~~~~--~~--~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~ 328 (415)
+..+.. .+.+...-. .....+ .+ ...+.+.++...+ ..+.++++.++..++++++.+.|+++|+
T Consensus 318 ~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~sr~~~~l~l~~al~~~---g~~g~~~~~~~~~~~a~~l~~~L~~~~g 394 (475)
T 3k40_A 318 PSWVVNAFNVDPLYLKHDMQGSAPDYRHWQIPLGRRFRALKLWFVLRLY---GVENLQAHIRRHCNFAKQFGDLCVADSR 394 (475)
T ss_dssp GGGC---------------------------CCCGGGTHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHSTT
T ss_pred HHHHHHHhcCCccccCCCcCCCCCCcccccccCCCcccHHHHHHHHHHH---hHHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 432110 000100000 000000 00 1123344444444 2467889999999999999999999999
Q ss_pred CcCCCCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEee---CChhhHHHHHHHHHHHH
Q 014936 329 ISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFA---VDPYSLEECLDRIKSFY 405 (415)
Q Consensus 329 ~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~---~~~~~l~~~l~~l~~~~ 405 (415)
++++ .+.....++++++... ....++...+.++.++.+.|+...+ ..++|++++ +++++++.++++|++++
T Consensus 395 ~~l~-~~~~~~iv~f~~~~~~----~~~~~l~~~L~~~g~~~~~~~~~~g-~~~lR~~~~~~~tt~~di~~~~~~i~~~~ 468 (475)
T 3k40_A 395 FELA-AEINMGLVCFRLKGSN----ERNEALLKRINGRGHIHLVPAKIKD-VYFLRMAICSRFTQSEDMEYSWKEVSAAA 468 (475)
T ss_dssp EEES-SCCBTTEEEEEESSCH----HHHHHHHHHHHHHTSCBCEEEEETT-EEEEEEECCCTTCCHHHHHHHHHHHHHHH
T ss_pred EEEe-cCCceEEEEEEeCCch----HHHHHHHHHHHhCCcEEEEeeEECC-EEEEEEEeCCCCCCHHHHHHHHHHHHHHH
Confidence 9854 4545556666664310 1245677777666555566554433 578999984 47899999999999998
Q ss_pred HHHHH
Q 014936 406 QRHAK 410 (415)
Q Consensus 406 ~~~~~ 410 (415)
+++.+
T Consensus 469 ~~~~~ 473 (475)
T 3k40_A 469 DEMEQ 473 (475)
T ss_dssp HHHHT
T ss_pred HHHhc
Confidence 87654
No 212
>2yky_A Beta-transaminase; transferase; HET: PLP SFE; 1.69A {Mesorhizobium SP} PDB: 2ykv_A* 2yku_A* 2ykx_A*
Probab=99.89 E-value=2.2e-28 Score=233.12 Aligned_cols=335 Identities=16% Similarity=0.099 Sum_probs=226.6
Q ss_pred ccCcceeEecccCCCCCCCCC-CcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChH
Q 014936 32 KNEKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCT 110 (415)
Q Consensus 32 ~~~~~~i~l~~g~~~~~~~~~-~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~ 110 (415)
.+|+.++||..|..... ++ .+|.+++++.+++.......|+. ....+|.+.|++++ + ..+.+++++||+
T Consensus 97 ~dG~~yiD~~~~~~~~~--lGh~~p~V~~Av~~q~~~~~~~~~~~-~~~~~Lae~L~~~~------p-~~~~v~~~nSGs 166 (465)
T 2yky_A 97 VDGHAYVNFLGEYTAGL--FGHSHPVIRAAVERALAVGLNLSTQT-ENEALFAEAVCDRF------P-SIDLVRFTNSGT 166 (465)
Confidence 35888999998873211 22 47889999999887654445544 34567888888776 2 457899999999
Q ss_pred HHHHHHHHHhc--CCCCEEEEcCCCCcchHHHHH----hCCC--eEEEeeccCCCCCCCChhHHHhhcC---CCceEEEe
Q 014936 111 QAIDVAMALLS--RPGANILLPRPGFPIYELSAA----FRHI--EVRHFDLLPDKGWEVDLDDIESLAD---QNTVALVI 179 (415)
Q Consensus 111 ~al~~~~~~l~--~~gd~vi~~~p~y~~~~~~~~----~~g~--~~~~~~~~~~~~~~~~~~~l~~~~~---~~~~~v~i 179 (415)
+|+..+++.+. ..++.|++.+++|+++...+. ..|. .+..++. .|++.|+++++ +++++|+
T Consensus 167 eA~~~Aik~ar~~tgr~~ii~~~~~yHG~~~~~~sg~~~~g~~~~~~~~~~-------~d~~~l~~~l~~~~~~~aavi- 238 (465)
T 2yky_A 167 EANLMALATATAITGRKTVLAFDGGYHGGLLNFASGHAPTNAPYHVVLGVY-------NDVEGTADLLKRHGHDCAAIL- 238 (465)
Confidence 99999998763 345899999999988665443 1222 1222221 37888988887 4555555
Q ss_pred cCC-CCccccC-CCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEE
Q 014936 180 INP-GNPCGNV-YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWF 257 (415)
Q Consensus 180 ~~p-~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~ 257 (415)
++| ++++|.+ .+.+.+++|.++|+++|+++|+||+|. +.. +. ......++. ...+.||||.++. |+|+||+
T Consensus 239 ~epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~-~r~-g~-~~a~~~~gv---~pDi~t~sK~lg~-G~piG~v 311 (465)
T 2yky_A 239 VEPMLGAGGCVPAERAFLDLLRAEASRCGALLIFDEVMT-SRL-SG-GGAQEMLGI---SADLTTLGKYIGG-GMSFGAF 311 (465)
Confidence 455 5669965 568889999999999999999999999 632 22 111222221 2335589999875 8999999
Q ss_pred EeeCCCCCCChHHHHHHHHh------hccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCC---C
Q 014936 258 VTTDPCGMFRKPKVVERMKK------YFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIP---C 328 (415)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~---~ 328 (415)
++++ ++++.+.. ....+.+.+++++.++.+.|+...+ +...++++++.+++.+.|+++. +
T Consensus 312 ~~~~--------~i~~~l~~~~~g~~~~~~T~~~npla~aAa~aaL~~l~~---~~~~~~~~~~~~~l~~~L~~~~~~~~ 380 (465)
T 2yky_A 312 GGRR--------DLMERFDPARDGAFAHAGTFNNNILTMSAGHAALTQIYT---RQAASDLSASGDRFRANLNRIAVENQ 380 (465)
Confidence 9876 56666654 1224567889999999888875422 2355666666666666666531 2
Q ss_pred CcCCCCCCCceEEEEecCccccC--------CCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEeeCChhhHHHHHHH
Q 014936 329 ISCPHKPEGSMAVMLKLNLSLLD--------DIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFAVDPYSLEECLDR 400 (415)
Q Consensus 329 ~~~~~~p~~g~~~~~~l~~~~~~--------~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~~~l~~~l~~ 400 (415)
+. ...+..|.++|+.+...... +......++..++ ++||.+.|+.. . . +++..+++++++++++
T Consensus 381 ~~-~~v~g~G~~~~i~~~~~~~~~~~~~~~~d~~~~~~~~~~ll-~~GV~v~p~~~-~--~---~s~~~t~edid~~l~~ 452 (465)
T 2yky_A 381 AP-LQFTGLGSLGTIHFSRAPIRSAGDVRAADQQLKELFFFHML-RKGIYLAPRGM-Y--A---LSLEIADAGRDAFAEA 452 (465)
Confidence 22 22456788888877531100 0011345666665 67999998762 2 1 6777899999999999
Q ss_pred HHHHHHHHHH
Q 014936 401 IKSFYQRHAK 410 (415)
Q Consensus 401 l~~~~~~~~~ 410 (415)
|.++++++..
T Consensus 453 l~~~l~~~~~ 462 (465)
T 2yky_A 453 LADFIGEQRA 462 (465)
Confidence 9999877643
No 213
>2ctz_A O-acetyl-L-homoserine sulfhydrylase; crystal, O-acetyl homoserine sulfhydrase, structural genomic structural genomics/proteomics initiative; HET: PLP; 2.60A {Thermus thermophilus} SCOP: c.67.1.3
Probab=99.94 E-value=5.9e-24 Score=202.31 Aligned_cols=287 Identities=16% Similarity=0.117 Sum_probs=195.7
Q ss_pred CcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHH----HhCCCeEEEe-e
Q 014936 78 GLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSA----AFRHIEVRHF-D 152 (415)
Q Consensus 78 g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~----~~~g~~~~~~-~ 152 (415)
...++++.++++++ .+..+++++|++++..++.++.++||+|+++.++|+++...+ +..|+++..+ +
T Consensus 59 ~~~~l~~~la~~~g--------~~~~v~~~sGt~A~~~~l~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 130 (421)
T 2ctz_A 59 TVDVLEKRLAALEG--------GKAALATASGHAAQFLALTTLAQAGDNIVSTPNLYGGTFNQFKVTLKRLGIEVRFTSR 130 (421)
T ss_dssp HHHHHHHHHHHHHT--------CSEEEEESSHHHHHHHHHHHHCCTTCEEEECSCCCHHHHHHHHTHHHHTTCEEEECCT
T ss_pred HHHHHHHHHHHHhC--------CCceEEecCHHHHHHHHHHHHhCCCCEEEEeCCCchHHHHHHHHHHHHcCCEEEEECC
Confidence 45789999999983 224455666799999999999999999999999999877654 7789998887 5
Q ss_pred ccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEcccc-CCcccCCCCccccccc
Q 014936 153 LLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVY-GHLVFGDKPFVPMGVF 231 (415)
Q Consensus 153 ~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~-~~~~~~~~~~~~~~~~ 231 (415)
.+ |++++++++++++++|++++|+||+|.+.+ +++|+++|+++|+++|+|++| +.. +.+. ++ ..
T Consensus 131 ~~-------d~~~l~~~i~~~~~~v~~~~~~n~~G~~~~---l~~i~~~a~~~g~~livD~~~~~~g-~~~~---~~-~~ 195 (421)
T 2ctz_A 131 EE-------RPEEFLALTDEKTRAWWVESIGNPALNIPD---LEALAQAAREKGVALIVDNTFGMGG-YLLR---PL-AW 195 (421)
T ss_dssp TC-------CHHHHHHHCCTTEEEEEEESSCTTTCCCCC---HHHHHHHHHHHTCEEEEECGGGGGG-TSCC---GG-GG
T ss_pred CC-------CHHHHHHhhccCCeEEEEECCCCCCCcccC---HHHHHHHHHHcCCEEEEECCccccc-ccCC---cc-cc
Confidence 42 799999999999999999999999999977 788899999999999999999 643 2222 22 22
Q ss_pred CCCCCeEEEccCccccCCCCceEEEEEeeCC-CCC-C-ChHHHH---------------------HHHHh--hccccCCc
Q 014936 232 GSTVPILTLGSLSKRWIVPGWRLGWFVTTDP-CGM-F-RKPKVV---------------------ERMKK--YFDILGDP 285 (415)
Q Consensus 232 ~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~-~~~-~-~~~~~~---------------------~~~~~--~~~~~~~~ 285 (415)
+. .+++.|+||.++.+|.|+|++++.+. ..+ . ....+. ...+. ........
T Consensus 196 ~~---Di~~~s~~K~l~~~g~~~G~~~~~~~~~~~~~~~~~~l~~~~~g~~g~~~~~~~~~~~~~~~~r~~~~~~~g~~~ 272 (421)
T 2ctz_A 196 GA---ALVTHSLTKWVGGHGAVIAGAIVDGGNFPWEGGRYPLLTEPQPGYHGLRLTEAFGELAFIVKARVDGLRDQGQAL 272 (421)
T ss_dssp TC---SEEEEETTTTTTCSSCCCCEEEEECSCSCCTTTTCHHHHSCBGGGTTBCHHHHHGGGHHHHHHHHTHHHHHCCCC
T ss_pred CC---eEEEECCcccccCCCCcEEEEEEeccchhhcccchhhhccccchhhhhhhhhhcchhHHHHHHHHHHHHhcCCCC
Confidence 22 38889999999999999999988631 111 0 000110 00110 01122244
Q ss_pred hhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCC-----------------CCceEEEEecCcc
Q 014936 286 ATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKP-----------------EGSMAVMLKLNLS 348 (415)
Q Consensus 286 ~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p-----------------~~g~~~~~~l~~~ 348 (415)
++....++...++. +..+.++..++.+.+.+.|+++|++..+.+| ..|..+.+.++.
T Consensus 273 ~~~~a~~~~~~l~~-----l~~r~~~~~~~a~~l~~~L~~~p~v~~v~~p~~~~~~~~~~~~~~~~~~~g~ivsf~l~~- 346 (421)
T 2ctz_A 273 GPFEAWVVLLGMET-----LSLRAERHVENTLHLAHWLLEQPQVAWVNYPGLPHHPHHDRAQKYFKGKPGAVLTFGLKG- 346 (421)
T ss_dssp CHHHHHHHHHHHTT-----HHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTCTTHHHHHHHHTTCCCSEEEEEETT-
T ss_pred CHHHHHHHHcCcch-----HHHHHHHHHHhHHHHHHHHHhCCCeeEEECCCCCCCCCHHHHHHhccCCCceEEEEEeCC-
Confidence 55555555555654 4556666778899999999988887643222 234556666642
Q ss_pred ccCCCCCHHHHHHHHHhh---cCeEEEcCCCCC----------------------C-CCeEEEEeeCChhhHHHHHHHHH
Q 014936 349 LLDDIIDDIDFCFKLAKE---ESVIILPGTAVG----------------------L-KNWLRVTFAVDPYSLEECLDRIK 402 (415)
Q Consensus 349 ~~~~~~~~~~~~~~ll~~---~gi~v~~g~~~~----------------------~-~~~iRi~~~~~~~~l~~~l~~l~ 402 (415)
..+....++.+ .++.++.|..+. . ++.||+|++. ++++..++.|+
T Consensus 347 -------~~~~~~~~~~~l~~~~~~~~~G~~~sl~~~~~~~~h~~~~~~~~~~~g~~~~~vRlS~g~--e~~~~li~~l~ 417 (421)
T 2ctz_A 347 -------GYEAAKRFISRLKLISHLANVGDTRTLAIHPASTTHSQLSPEEQAQAGVSPEMVRLSVGL--EHVEDLKAELK 417 (421)
T ss_dssp -------HHHHHHHHHHTCSSSEECSCCCCSSCEEECGGGTTTTTSCHHHHHHHTCCTTEEEEECCS--SCHHHHHHHHH
T ss_pred -------CHHHHHHHHHhCCcceecccCCCCCceeeCCcccccccCCHHHHHhcCCCCCeEEEEeCC--CCHHHHHHHHH
Confidence 11222333333 444545452211 1 4789999875 57888888887
Q ss_pred HHH
Q 014936 403 SFY 405 (415)
Q Consensus 403 ~~~ 405 (415)
+++
T Consensus 418 ~al 420 (421)
T 2ctz_A 418 EAL 420 (421)
T ss_dssp HHT
T ss_pred HHh
Confidence 764
No 214
>2x3l_A ORN/Lys/Arg decarboxylase family protein; lyase; HET: LLP; 2.00A {Staphylococcus aureus}
Probab=99.93 E-value=5.3e-26 Score=217.76 Aligned_cols=289 Identities=12% Similarity=0.076 Sum_probs=189.8
Q ss_pred CCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeec
Q 014936 74 APTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDL 153 (415)
Q Consensus 74 ~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~ 153 (415)
.+.....++++.+|+ ++ .+ +++++++|+++++.+++.+++++||+|+++.|+|.++...+...|++++.++.
T Consensus 54 ~~~~~~~~~~~~la~-~g------~~-~~v~~~~G~t~a~~~~~~a~~~~gd~Vlv~~~~h~s~~~~~~~~G~~~~~v~~ 125 (446)
T 2x3l_A 54 HPEEVILKSMKQVEK-HS------DY-DGYFLVNGTTSGILSVIQSFSQKKGDILMARNVHKSVLHALDISQQEGHFIET 125 (446)
T ss_dssp SCSSHHHHHHHHHCS-CT------TE-EEEEESSHHHHHHHHHHHTTTTSSSCEEECTTCCHHHHHHHHHHTCCEEECEE
T ss_pred CcchHHHHHHHHHHh-cC------CC-ceEEEeCCHHHHHHHHHHHhcCCCCEEEEecCccHHHHHHHHHcCCeEEEEeC
Confidence 334456677887777 62 33 78999999999999999999999999999999999999999999999998887
Q ss_pred cCCCC----CCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCC-cccCCCCcccc
Q 014936 154 LPDKG----WEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGH-LVFGDKPFVPM 228 (415)
Q Consensus 154 ~~~~~----~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~-~~~~~~~~~~~ 228 (415)
..+.+ +.+|++.+ +.++++++++++ .|++|.+++ +++|+++|+++|+++|+||+|+. +.|.+. ....
T Consensus 126 ~~~~~~~~~~~~d~~~l---~~~~~~~v~~~~-~n~~G~~~~---l~~I~~l~~~~~~~livDea~~~~~~f~~~-~~~~ 197 (446)
T 2x3l_A 126 HQSPLTNHYNKVNLSRL---NNDGHKLVVLTY-PNYYGETFN---VEEVIKSLHQLNIPVLIDEAHGAHFGLQGF-PDST 197 (446)
T ss_dssp EECTTTSSEEEEEC----------CCEEEEES-SCTTSCCCC---HHHHHHHHHHTTCCEEEECTTCTTTTSTTS-CCCG
T ss_pred eeccccCcCCCCCHHHH---cCCCceEEEEEC-CCCCeEecC---HHHHHHHHHhcCCeEEEcchhhhhhccCCC-CCCh
Confidence 32222 45788877 456788999999 455999976 67888999999999999999986 334443 2233
Q ss_pred cccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhhc--cccCCchhHHHHHHHHhhCCCcHHHHH
Q 014936 229 GVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYF--DILGDPATFIQAAVPSILQQPDEVFFK 306 (415)
Q Consensus 229 ~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~a~~~~l~~~~~~~~~ 306 (415)
...+.+ +++.|+||++ .++.++||+++++.. . + ...+.... ...++++.....++..+++.......+
T Consensus 198 ~~~g~D---i~~~S~~K~l-~~~~g~g~l~~~~~~--i---~-~~~~~~~~~~~~~~s~~~~~~aal~~a~~~l~~~g~~ 267 (446)
T 2x3l_A 198 LNYQAD---YVVQSFHKTL-PALTMGSVLYIHKNA--P---Y-RENIIEYLSYFQTSSPSYLIMASLESAAQFYKTYDST 267 (446)
T ss_dssp GGGTCS---EEEECHHHHS-SSCTTCEEEEEETTC--T---T-HHHHHHHHHHHSCSSCCHHHHHHHHHHHHHHHHCCCH
T ss_pred HHcCCC---EEEECCcccc-ccccccEEEEEcCCc--C---C-HHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHhCHH
Confidence 333332 8889999963 333458999997632 1 1 12232221 112344444444443333211000011
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEE-cCCCCCCCCeEEE
Q 014936 307 KTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIIL-PGTAVGLKNWLRV 385 (415)
Q Consensus 307 ~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~-~g~~~~~~~~iRi 385 (415)
+..++.+++++.+.+. ++.++ .+..+.++|+.++. .+..++...|.+ +||.+. +|. +++|+
T Consensus 268 ~~~~~~~~l~~~l~~~-----g~~~~-~~~~~~~l~i~~~~------~~~~~l~~~L~~-~GI~v~~~g~-----~~iRi 329 (446)
T 2x3l_A 268 LFFAKRAQLIECLENK-----GFEML-QVDDPLKLLIKYEG------FTGHDIQNWFMN-AHIYLELADD-----YQALA 329 (446)
T ss_dssp HHHHHHHHHHHHHHHH-----TCEEE-ECSSTTEEEEECTT------SCHHHHHHHHHH-TTEEESEECS-----SCEEE
T ss_pred HHHHHHHHHHHHHHHc-----CCEEC-cCCCCeEEEEEeCC------cCHHHHHHHHHH-CCCEEEecCC-----CEEEE
Confidence 2445555555555554 55522 34445578887751 246667666654 599997 543 68999
Q ss_pred Eee--CChhhHHHHHHHHHHHHHH
Q 014936 386 TFA--VDPYSLEECLDRIKSFYQR 407 (415)
Q Consensus 386 ~~~--~~~~~l~~~l~~l~~~~~~ 407 (415)
+++ .+++++ .++++|++++++
T Consensus 330 ~~~~~~t~e~i-~l~~aL~~~~~~ 352 (446)
T 2x3l_A 330 ILPLWHHDDTY-LFDSLLRKIEDM 352 (446)
T ss_dssp ECCCCCTTCCC-CHHHHHHHHHTC
T ss_pred EeecCCCHHHH-HHHHHHHHHHHh
Confidence 996 488899 999999888654
No 215
>2z67_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine biosynthesis, seven-stranded BETE-strand, PYR 5'-phosphate; HET: PLP; 2.50A {Methanococcus maripaludis} SCOP: c.67.1.9
Probab=99.93 E-value=2.1e-25 Score=214.47 Aligned_cols=299 Identities=12% Similarity=0.102 Sum_probs=202.4
Q ss_pred cHHHHHHHHHHHhhhCCCCCCCCcEEEeCChH-HHHHHHHHHhcC--CCCEEEEcCCCCcchHHHHHhCCCeEEEeeccC
Q 014936 79 LPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCT-QAIDVAMALLSR--PGANILLPRPGFPIYELSAAFRHIEVRHFDLLP 155 (415)
Q Consensus 79 ~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~-~al~~~~~~l~~--~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~ 155 (415)
..++.+.+.+++.+.+|. +++ +++|+|++ .++.+++.++.. +|+.|+++.++|+++...++..|++++.++..+
T Consensus 131 ~~~~~~~~~~~la~~~g~--~~~-~~~t~g~te~a~~~al~~~~~~~~~~~vi~~~~~h~s~~~~~~~~G~~~~~v~~~~ 207 (456)
T 2z67_A 131 MYALTNKILESFFKQLGL--NVH-AIATPISTGMSISLCLSAARKKYGSNVVIYPYASHKSPIKAVSFVGMNMRLVETVL 207 (456)
T ss_dssp HHHHHHHHHHHHHHHTTC--CCE-EEEESSCHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHTTCEEEEECCEE
T ss_pred HHHHHHHHHHHHHHHcCC--CCC-EEEeCcHHHHHHHHHHHHHHHhcCCCEEEEECCCcHHHHHHHHHcCCCceEEEEec
Confidence 345555566666665553 344 99999999 566656655443 678899999999999999999999999888643
Q ss_pred -CCCCCCChhHHHhhc-C----CCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCccccc
Q 014936 156 -DKGWEVDLDDIESLA-D----QNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMG 229 (415)
Q Consensus 156 -~~~~~~~~~~l~~~~-~----~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~ 229 (415)
+.++.+|+++|++++ + +++.+|++++|+||||.+ +++++|+++|+++|+++++|++|+.+..+. .+....
T Consensus 208 ~~~~~~~d~~~l~~~i~~~~~~~~~~~vv~~~~nn~tG~i---~~l~~I~~la~~~g~~v~vD~A~~~~~~g~-~~~~~~ 283 (456)
T 2z67_A 208 DGDRVYVPVEDIENAIKKEIELGNRPCVLSTLTFFPPRNS---DDIVEIAKICENYDIPHIINGAYAIQNNYY-LEKLKK 283 (456)
T ss_dssp ETTEEECCHHHHHHHHHHHHHTTCCEEEEEESSCCTTBCC---CCHHHHHHHHHHHTCCEEEECTTTTTCHHH-HHHHHH
T ss_pred cCCCCCcCHHHHHHHHHHHhhCCCeEEEEEeCCCCCCCCc---CCHHHHHHHHHHcCCcEEEECcchHHHHHh-hHHHHH
Confidence 345779999999988 4 467778889999999999 567888888999999999999998755311 011111
Q ss_pred ccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhhcccc-CCchhHHHHHHHHhhCCCcHHHHHHH
Q 014936 230 VFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDIL-GDPATFIQAAVPSILQQPDEVFFKKT 308 (415)
Q Consensus 230 ~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~a~~~~l~~~~~~~~~~~ 308 (415)
.+....+ +++.|++|. +.+++++||+++++ +++++.+....... ...+...+.++...+. ...+++.
T Consensus 284 ~~~~~~D-~~~~s~hK~-~~~p~g~G~l~~~~-------~~~~~~l~~~~~g~~~~~~~~~~~aal~~l~---~~~~~~~ 351 (456)
T 2z67_A 284 AFKYRVD-AVVSSSDKN-LLTPIGGGLVYSTD-------AEFIKEISLSYPGRASATPVVNTLVSLLSMG---SKNYLEL 351 (456)
T ss_dssp HHTSCCS-EEEEEHHHH-HCCCSSCEEEEESC-------HHHHHHHHTTSCSCBCSHHHHHHHHHHHHHH---HHHHHHH
T ss_pred hhCCCCC-EEEEcCCCC-cCCCCCeEEEEEcC-------HHHHhhcCcCCCCCCCCCHHHHHHHHHHHHH---HHHHHHH
Confidence 1111111 567889997 45568899999954 24666664432211 1122334444444442 4678888
Q ss_pred HHHHHHHHHHHHHHhhcCC---CCcCCCCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCe---EEE------cCCC
Q 014936 309 LNLLKQSVDICYNKIKEIP---CISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESV---IIL------PGTA 376 (415)
Q Consensus 309 ~~~~~~~~~~l~~~l~~~~---~~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi---~v~------~g~~ 376 (415)
.++..++++++.+.|++++ ++. +..|. .++++.+... + ...++...|. +.|| .+. +|..
T Consensus 352 ~~~~~~~~~~l~~~L~~~~~~~g~~-v~~~~--~~v~~~~~~~---~--~~~~l~~~L~-~~gi~~~rv~~~~g~f~G~~ 422 (456)
T 2z67_A 352 VKNQKNSKKLLDELLNDLSKKTGGK-FLDVE--SPIASCISVN---S--DPVEIAAKLY-NLRVTGPRGIKKTDHFGNCY 422 (456)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSSCC-BCCCC--CSSEEEEECS---S--CHHHHHHHHH-HTTEESCEEECTTCHHHHTC
T ss_pred HHHHHHHHHHHHHHHHhcccccCCE-ecCCC--CeEEEEEecc---c--HHHHHHHHHH-HcCCCcceEEeecCcccccc
Confidence 9999999999999999875 666 43555 4555555210 0 1355666654 5565 343 2333
Q ss_pred CCC--CCeEEEEee--CChhhHHHHHHHHHHHH
Q 014936 377 VGL--KNWLRVTFA--VDPYSLEECLDRIKSFY 405 (415)
Q Consensus 377 ~~~--~~~iRi~~~--~~~~~l~~~l~~l~~~~ 405 (415)
|.. .+++|++++ ++++++++++++|++++
T Consensus 423 ~~~~~~~~vr~s~~~~~t~eeid~~l~~L~~~~ 455 (456)
T 2z67_A 423 LGTYTHDYIVMNAAIGVRTEDIVNSVSKLEKIL 455 (456)
T ss_dssp SSCCSCCEEEEECCTTCCHHHHHHHHHHHHTC-
T ss_pred ccccCcchhhhhhhcCCCHHHHHHHHHHHHHHh
Confidence 322 479999996 68999999999998754
No 216
>3b8x_A WBDK, pyridoxamine 5-phosphate-dependent dehydrase; aspartate aminotransferase, colitose, perosamine, O-antigen, pyridoxal phosphate,; HET: G4M; 1.70A {Escherichia coli} PDB: 2gms_A* 2gmu_A* 2r0t_A* 3gr9_A*
Probab=99.93 E-value=1.9e-23 Score=197.18 Aligned_cols=307 Identities=14% Similarity=0.115 Sum_probs=210.9
Q ss_pred CCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHh-------cCCC
Q 014936 52 HTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALL-------SRPG 124 (415)
Q Consensus 52 ~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l-------~~~g 124 (415)
..++.+++++.+.+... .|.+..+..++|+.++++++ .++++++++|++++..++.++ .++|
T Consensus 12 ~~~~~~~~a~~~~~~~~---~~~~~~~~~~l~~~la~~~~--------~~~~i~~~sGt~a~~~al~~~~~~~~~~~~~g 80 (390)
T 3b8x_A 12 TWDDLEYKAIQSVLDSK---MFTMGEYVKQYETQFAKTFG--------SKYAVMVSSGSTANLLMIAALFFTKKPRLKKG 80 (390)
T ss_dssp CCCHHHHHHHHHHHHHT---CCSSCHHHHHHHHHHHHHHT--------CSEEEEESCHHHHHHHHHHHTTSSSSCSCCTT
T ss_pred CCCHHHHHHHHHHHHcC---CCCCChHHHHHHHHHHHHHC--------CCcEEEECCHHHHHHHHHHHHHhhhhcCCCCc
Confidence 35688999998888653 34455678999999999983 236788888889999999998 7899
Q ss_pred CEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhh
Q 014936 125 ANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANK 204 (415)
Q Consensus 125 d~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~ 204 (415)
|+|+++.++|+++...++..|++++.++++++ ++.+|+++|++++++++++|++++ ++|.. .++++|.++|++
T Consensus 81 ~~Vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~~d~~~l~~~i~~~~~~v~~~~---~~g~~---~~~~~i~~l~~~ 153 (390)
T 3b8x_A 81 DEIIVPAVSWSTTYYPLQQYGLRVKFVDIDIN-TLNIDIESLKEAVTDSTKAILTVN---LLGNP---NNFDEINKIIGG 153 (390)
T ss_dssp CEEEEESSSCHHHHHHHHHTTCEEEEECBCTT-TCSBCHHHHHHHCCTTEEEEEEEC---GGGCC---CCHHHHHHHHTT
T ss_pred CEEEECCCCcHHHHHHHHHcCCEEEEEecCcc-ccCcCHHHHHHHhCcCCeEEEEEC---CccCh---hhHHHHHHHHHH
Confidence 99999999999999999999999999998653 467999999999988899888875 45555 578999999999
Q ss_pred cCcEEEEccccCCcccCCCCcccccccCCCCCeEEEcc--CccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhhccc-
Q 014936 205 LKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGS--LSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDI- 281 (415)
Q Consensus 205 ~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s--~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~- 281 (415)
+|+++|+|++|+.+.... ...++.... +...| .+|.+. +| +.|++++++ +++.+.++.....
T Consensus 154 ~~~~li~D~a~~~g~~~~-----~~~~g~~~~-~~~~s~~~~k~~~-~g-~gG~~~~~~-------~~l~~~~~~~~~~g 218 (390)
T 3b8x_A 154 RDIILLEDNCESMGATFN-----NKCAGTFGL-MGTFSSFYSNHIA-TM-EGGCIVTDD-------EEIYHILLCIRAHG 218 (390)
T ss_dssp SCCEEEEECTTCTTCEET-----TEETTSSSS-EEEEECCTTSSSC-SS-SCEEEEESC-------HHHHHHHHHHTBTT
T ss_pred cCCEEEEECcCcccCEEC-----Ccccccccc-eEEEEccCCCCCc-cC-CceEEEeCC-------HHHHHHHHHHHhcC
Confidence 999999999999643211 112222111 22222 245432 23 348888864 1354444332110
Q ss_pred -------------------------------cCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCc
Q 014936 282 -------------------------------LGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCIS 330 (415)
Q Consensus 282 -------------------------------~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~ 330 (415)
+...+++...++...+ +++++..++.+++++++.+.|+++|++.
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~l~~l-----~~l~~~~~~~~~~~~~l~~~L~~~~~~~ 293 (390)
T 3b8x_A 219 WTRNLPKKNKVTGVKSDDQFEESFKFVLPGYNVRPLEMSGAIGIEQL-----KKLPRFISVRRKNAEYFLDKFKDHPYLD 293 (390)
T ss_dssp BSTTSCSEETTTEECCSCTTTSSSCBCSCCCBCCCCHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHTTCSSEE
T ss_pred CCccccccccccccccccccccccceeccccccCcCHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHhcCCCCcc
Confidence 0113444444444444 4577888899999999999999888876
Q ss_pred CCCCC--CCce-EEEEecCccccCCCCCHHHHHHHHHhhcCeEEEc---CCCCCC----------------------CCe
Q 014936 331 CPHKP--EGSM-AVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILP---GTAVGL----------------------KNW 382 (415)
Q Consensus 331 ~~~~p--~~g~-~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~---g~~~~~----------------------~~~ 382 (415)
.. .+ ..++ .+++.++... + .+..++...| .++||.+.+ |..|.. .+.
T Consensus 294 ~~-~~~~~~~~~~~~i~~~~~~--~-~~~~~l~~~L-~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 368 (390)
T 3b8x_A 294 VQ-QETGESSWFGFSFIIKKDS--G-VIRKQLVENL-NSAGIECRPIVTGNFLKNTDVLKYFDYTVHNNVDNAEYLDKNG 368 (390)
T ss_dssp EC-CCCSBCCCCEEEEEECTTS--C-CCHHHHHHHH-HHTTBCCBCSTTSSGGGCHHHHTTCEEEESSCCHHHHHHHHHE
T ss_pred cC-CCCCCcccEEEEEEecCcC--c-ccHHHHHHHH-HHCCCCeeeecCCchhhcchhhhcCCCCCcCCChHHHHHhcCE
Confidence 33 32 1222 2455554210 1 1455666655 667999986 332211 135
Q ss_pred EEEEee--CChhhHHHHHHHH
Q 014936 383 LRVTFA--VDPYSLEECLDRI 401 (415)
Q Consensus 383 iRi~~~--~~~~~l~~~l~~l 401 (415)
+|+++. ++++|++.+++.|
T Consensus 369 l~l~~~~~~t~~di~~i~~~l 389 (390)
T 3b8x_A 369 LFVGNHQIELFDEIDYLREVL 389 (390)
T ss_dssp EEEECCSSCCHHHHHHHHHHT
T ss_pred EEeeCCCCCCHHHHHHHHHhh
Confidence 999994 6899999998876
No 217
>2jis_A Cysteine sulfinic acid decarboxylase; pyridoxal phosphate, alternative splicing, pyridoxal phosphate (PLP), structural genomics consortium (SGC); HET: PLP; 1.6A {Homo sapiens}
Probab=99.93 E-value=6.4e-24 Score=207.34 Aligned_cols=314 Identities=12% Similarity=0.065 Sum_probs=211.0
Q ss_pred CCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhc-------C-CCC------EEEEcCCCCcch
Q 014936 72 GYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLS-------R-PGA------NILLPRPGFPIY 137 (415)
Q Consensus 72 ~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~-------~-~gd------~vi~~~p~y~~~ 137 (415)
.|....+..++++.+.+++.+..|. +++++++|+|+|+++.+++.++. + +|+ .|+++.++|+++
T Consensus 139 ~~~~s~~~~~le~~~~~~la~l~g~--~~~~~~~t~ggtea~~~al~~ar~~~~~~~~~~G~~~~~~~~vl~s~~~h~s~ 216 (515)
T 2jis_A 139 TYEIAPVFVLMEEEVLRKLRALVGW--SSGDGIFCPGGSISNMYAVNLARYQRYPDCKQRGLRTLPPLALFTSKECHYSI 216 (515)
T ss_dssp CTTTCHHHHHHHHHHHHHHHHHHTC--SSCEEEEESSHHHHHHHHHHHHHHHHCTTHHHHCGGGSCCEEEEEETTSCTHH
T ss_pred chhhchHHHHHHHHHHHHHHHHhCC--CCCCeEEcCCcHHHHHHHHHHHHHHHhhHHhhcCccccCCeEEEECCCccHHH
Confidence 4555445566777766666666554 37899999999999999988873 2 575 899999999999
Q ss_pred HHHHHhCCC---eEEEeeccCCCCCCCChhHHHhhcCC------CceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcE
Q 014936 138 ELSAAFRHI---EVRHFDLLPDKGWEVDLDDIESLADQ------NTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTL 208 (415)
Q Consensus 138 ~~~~~~~g~---~~~~~~~~~~~~~~~~~~~l~~~~~~------~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~ 208 (415)
...++..|. +++.++.+ .++.+|+++|++++++ ++++|++++|+||||.+. ++++|+++|+++|++
T Consensus 217 ~~~~~~~g~g~~~v~~v~~~--~~~~~d~~~L~~~i~~~~~~g~~~~~Vv~~~~~n~tG~i~---~l~~I~~la~~~g~~ 291 (515)
T 2jis_A 217 QKGAAFLGLGTDSVRVVKAD--ERGKMVPEDLERQIGMAEAEGAVPFLVSATSGTTVLGAFD---PLEAIADVCQRHGLW 291 (515)
T ss_dssp HHHHHHTTSCGGGEEEECBC--TTSCBCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBC---CHHHHHHHHHHHTCE
T ss_pred HHHHHHcCCCCCcEEEEecC--CCCcCCHHHHHHHHHHHHhCCCCcEEEEEeCCCCCCCCcc---CHHHHHHHHHHcCCe
Confidence 999988888 88888875 3567999999998865 478899999999999994 588889999999999
Q ss_pred EEEccccCCcccCCCCcc-cccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHHHH----Hhhc-c--
Q 014936 209 VIADEVYGHLVFGDKPFV-PMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERM----KKYF-D-- 280 (415)
Q Consensus 209 li~De~~~~~~~~~~~~~-~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~----~~~~-~-- 280 (415)
+++|++|+.+.+...... .+..+. ...+++.+++|+++.| .++|+++++++. ++.+.. ..+. .
T Consensus 292 l~vD~a~~~~~~~~~~~~~~~~g~~--~aD~v~~s~hK~l~~p-~g~G~l~~~~~~------~~~~~~~~~~~~yl~~~~ 362 (515)
T 2jis_A 292 LHVDAAWGGSVLLSQTHRHLLDGIQ--RADSVAWNPHKLLAAG-LQCSALLLQDTS------NLLKRCHGSQASYLFQQD 362 (515)
T ss_dssp EEEEETTGGGGGGCTTTGGGGTTGG--GCSEEEECTTSTTCCC-SCCEEEEESCCS------CHHHHHHCC---------
T ss_pred EEEehhhhhHHHhChhhHhhcCCCc--cCCEEEECcccccCCC-CCeeEEEEeChH------HHHHHHhcCCchhccCCc
Confidence 999999998776433221 122221 1127778999996544 569999997741 132221 0000 0
Q ss_pred -----------c----cCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEec
Q 014936 281 -----------I----LGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKL 345 (415)
Q Consensus 281 -----------~----~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l 345 (415)
. ......+.+.++..++. ...+++..++..++++++.+.|+++|+++++..|..+.+.+...
T Consensus 363 ~~~~~~~~~~~~~~~~~rr~~al~~~~~l~~lg---~~g~~~~~~~~~~~a~~l~~~L~~~~g~~~~~~~~~~~v~f~~~ 439 (515)
T 2jis_A 363 KFYDVALDTGDKVVQCGRRVDCLKLWLMWKAQG---DQGLERRIDQAFVLARYLVEEMKKREGFELVMEPEFVNVCFWFV 439 (515)
T ss_dssp CCSCGGGCCGGGCSCSSCCCCHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHTSTTEEESSCCSSSEEEEEEC
T ss_pred ccccccCCCCCCCCCCCCcccHHHHHHHHHHHh---HHHHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCeeEEEEEEe
Confidence 0 00011334444444443 36688889999999999999999998988553455555444333
Q ss_pred CccccCC---CCCH-H-------HHHHHHHhhcCeEEEcCCC-CCCCCeEEEEee---CChhhHHHHHHHHHHHHH
Q 014936 346 NLSLLDD---IIDD-I-------DFCFKLAKEESVIILPGTA-VGLKNWLRVTFA---VDPYSLEECLDRIKSFYQ 406 (415)
Q Consensus 346 ~~~~~~~---~~~~-~-------~~~~~ll~~~gi~v~~g~~-~~~~~~iRi~~~---~~~~~l~~~l~~l~~~~~ 406 (415)
+.. ..+ ..+- . .+...+ .+.|+.+..... .+..+++|++++ +++++++.+++.|+++++
T Consensus 440 p~~-~~~~~~~~~~~~~l~~~~~~l~~~l-~~~G~~~~~~~~~~~~~~~lRis~~~~~~t~edid~~~~~l~~~~~ 513 (515)
T 2jis_A 440 PPS-LRGKQESPDYHERLSKVAPVLKERM-VKEGSMMIGYQPHGTRGNFFRVVVANSALTCADMDFLLNELERLGQ 513 (515)
T ss_dssp CGG-GTTCTTSTTHHHHHHTHHHHHHHHH-HHHTSCEEEEEEETTEEEEEEEECCCTTCCHHHHHHHHHHHHHHHT
T ss_pred Ccc-ccccccchhHHHHHHHHHHHHHHHH-HhcCCEEEEEEEECCceEEEEEEeCCCCCCHHHHHHHHHHHHHHHh
Confidence 321 001 0010 1 133334 455765432111 122468999994 689999999999988764
No 218
>1ohv_A 4-aminobutyrate aminotransferase; PLP-dependent enzyme, 4- AMIN acid, antiepileptic drug target; HET: PLP; 2.3A {Sus scrofa} SCOP: c.67.1.4 PDB: 1ohw_A* 1ohy_A*
Probab=99.93 E-value=8.8e-25 Score=210.81 Aligned_cols=340 Identities=12% Similarity=0.050 Sum_probs=221.5
Q ss_pred ccCcceeEecccCCCCCCCCC-CcHHHHHHHHHHHhcC---CCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeC
Q 014936 32 KNEKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLSE---KFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTS 107 (415)
Q Consensus 32 ~~~~~~i~l~~g~~~~~~~~~-~~~~~~~a~~~~~~~~---~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~ 107 (415)
.+|+.++||..|..... ++ .+|.+.+|+.+++... ....|+. ....++++.+++.+.+..+ ...+++++++
T Consensus 60 ~dG~~ylD~~~g~~~~~--lGh~~p~v~~A~~~~~~~~~~~~~~~~~~-~~~~~l~~~la~~l~~~~~--~~~~~v~f~~ 134 (472)
T 1ohv_A 60 VDGNRMLDLYSQISSIP--IGYSHPALVKLVQQPQNVSTFINRPALGI-LPPENFVEKLRESLLSVAP--KGMSQLITMA 134 (472)
T ss_dssp TTSCEEEESSHHHHTCS--SCBTCHHHHHHHHCGGGHHHHHCCCCTTT-SCBTTHHHHHHHTGGGGCC--TTCCEEEEES
T ss_pred CCCCEEEECCCCHhhcc--cCCCCHHHHHHHHHHHhhccccccccccc-ccHHHHHHHHHHHHHHhCC--CCcCEEEEeC
Confidence 45778999988874322 23 5899999998875321 1123443 3457899999997766443 3567999999
Q ss_pred ChHHHHHHHHHHhc--------C-----------------CC---CEEEEcCCCCcchHHHHH-hCCCe--------E--
Q 014936 108 GCTQAIDVAMALLS--------R-----------------PG---ANILLPRPGFPIYELSAA-FRHIE--------V-- 148 (415)
Q Consensus 108 g~~~al~~~~~~l~--------~-----------------~g---d~vi~~~p~y~~~~~~~~-~~g~~--------~-- 148 (415)
||++|++.+++.+. + +| +.|++.+++|+++...+. ..|.. .
T Consensus 135 sGseA~~~Aik~a~~~~~~~~~~~~~~t~~~~~~~~~~~~~g~~r~~ii~~~~~yHg~~~~~~~~~g~~~~~~~~~~~~~ 214 (472)
T 1ohv_A 135 CGSCSNENAFKTIFMWYRSKERGQSAFSKEELETCMINQAPGCPDYSILSFMGAFHGRTMGCLATTHSKAIHKIDIPSFD 214 (472)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHTTCTTTSCCCEEEEETTCCCCSSHHHHHHCCSCHHHHTTSCCCC
T ss_pred CchhHHHHHHHHHHHHhhhhccCcccccccccccccccccccCCCCeEEEECCCcccccHHHHhcCCCccccccCCCCCC
Confidence 99999999998873 1 46 899999999998766553 22321 1
Q ss_pred -EEeeccCCC-C------C-----CCChhHHHhhcCC------CceEEEecCCCCcccc-CCCHHHHHHHHHHHhhcCcE
Q 014936 149 -RHFDLLPDK-G------W-----EVDLDDIESLADQ------NTVALVIINPGNPCGN-VYSYQHLQKLAETANKLKTL 208 (415)
Q Consensus 149 -~~~~~~~~~-~------~-----~~~~~~l~~~~~~------~~~~v~i~~p~nptG~-~~~~~~l~~i~~~~~~~~~~ 208 (415)
..++..... . + ..|+++|++++++ ++++|++...+|++|. ..+.+.+++|.++|++||++
T Consensus 215 ~~~~~~p~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~vive~v~~~~G~~~~~~~~l~~l~~l~~~~g~l 294 (472)
T 1ohv_A 215 WPIAPFPRLKYPLEEFVKENQQEEARCLEEVEDLIVKYRKKKKTVAGIIVEPIQSEGGDNHASDDFFRKLRDISRKHGCA 294 (472)
T ss_dssp CCEECCCCCCSSGGGCHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECSSBCTTTCBCCCHHHHHHHHHHHHHTTCE
T ss_pred CcccCCCcccCccccccccchhHHHHHHHHHHHHHHhcCCCCCCEEEEEEcCCcCCCCCCCCCHHHHHHHHHHHHHhCCE
Confidence 111211000 0 0 1257888888865 5666665555788997 57899999999999999999
Q ss_pred EEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhh-ccccCCchh
Q 014936 209 VIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKY-FDILGDPAT 287 (415)
Q Consensus 209 li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 287 (415)
+|+||+|.++.+.|. ...+..++.. ..+.+.||||.+ ++| ||++ ++ ++. .+... ...+.+.++
T Consensus 295 li~DEv~~g~g~~g~-~~~~~~~gv~-~~~Di~t~sK~~-l~G---G~~~-~~--------~~~-~~~~~~~~~T~~~~~ 358 (472)
T 1ohv_A 295 FLVDEVQTGGGSTGK-FWAHEHWGLD-DPADVMTFSKKM-MTG---GFFH-KE--------EFR-PNAPYRIFNTWLGDP 358 (472)
T ss_dssp EEEECTTTTTTTTSS-SSGGGGGCCS-SCCSEEEECGGG-SSE---EEEE-CG--------GGS-CSSSSSSCCSSSSCH
T ss_pred EEEeCcccCCCCCCC-chhccccCCC-CCCCEEEEcccc-ccC---CccC-ch--------hhc-ccccccccCccCccH
Confidence 999999997665443 1122233311 002234889995 445 7766 32 221 11122 123446788
Q ss_pred HHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcC----CC-CcCCCCCCCceEEEEecCccccCCCCCHHHHHHH
Q 014936 288 FIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEI----PC-ISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFK 362 (415)
Q Consensus 288 ~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~----~~-~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ 362 (415)
+++.++.++|+...+ +...++++++++++.+.|+++ |. +. ...+ .|.+++++++.. ....+++..
T Consensus 359 ~~~aaa~aal~~~~~---~~~~~~~~~~~~~l~~~L~~l~~~~~~~v~-~~~~-~g~~~~~~~~~~-----~~~~~~~~~ 428 (472)
T 1ohv_A 359 SKNLLLAEVINIIKR---EDLLSNAAHAGKVLLTGLLDLQARYPQFIS-RVRG-RGTFCSFDTPDE-----SIRNKLISI 428 (472)
T ss_dssp HHHHHHHHHHHHHHH---TTHHHHHHHHHHHHHHHHHHHHHHCTTTCE-EEEE-ETTEEEEECSSH-----HHHHHHHHH
T ss_pred HHHHHHHHHHHHHHh---CCHHHHHHHHHHHHHHHHHHHHhhCCCcEE-eecC-CceEEEEEeCCh-----hHHHHHHHH
Confidence 898888888753211 235677777777777777653 32 32 1123 366777776521 124567777
Q ss_pred HHhhcCeEEEcCCCCCCCCeEEEEe--eCChhhHHHHHHHHHHHHHH
Q 014936 363 LAKEESVIILPGTAVGLKNWLRVTF--AVDPYSLEECLDRIKSFYQR 407 (415)
Q Consensus 363 ll~~~gi~v~~g~~~~~~~~iRi~~--~~~~~~l~~~l~~l~~~~~~ 407 (415)
++ ++||.+.|+. .++||+++ .++++++++++++|++++++
T Consensus 429 l~-~~Gv~~~~~g----~~~iRi~~~~~~t~e~i~~~~~~l~~~l~~ 470 (472)
T 1ohv_A 429 AR-NKGVMLGGCG----DKSIRFRPTLVFRDHHAHLFLNIFSDILAD 470 (472)
T ss_dssp HH-HTTEECEEET----TTEEEECCCTTCCHHHHHHHHHHHHHHHHT
T ss_pred HH-HCCeEEecCC----CCEEEEECCCCCCHHHHHHHHHHHHHHHHh
Confidence 65 5799998853 47999977 47899999999999988764
No 219
>1wyu_A Glycine dehydrogenase (decarboxylating) subunit 1; alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_A* 1wyv_A*
Probab=99.92 E-value=5.9e-24 Score=203.65 Aligned_cols=282 Identities=17% Similarity=0.151 Sum_probs=184.3
Q ss_pred HHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHH-hcCCCCEEEEcCCCCcchHHHH----HhCCCeEEEeecc
Q 014936 80 PLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMAL-LSRPGANILLPRPGFPIYELSA----AFRHIEVRHFDLL 154 (415)
Q Consensus 80 ~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~-l~~~gd~vi~~~p~y~~~~~~~----~~~g~~~~~~~~~ 154 (415)
.++++.+++++ +++++++++++|++.+++.+..+ ..++||+|+++.++|+.+.... +..|++++.++.
T Consensus 111 ~~~~~~la~~~------g~~~~~i~~~~g~taa~ea~~~a~~~~~gd~Viv~~~~h~s~~~~~~~~a~~~G~~v~~v~~- 183 (438)
T 1wyu_A 111 FEYQTMIAELA------GLEIANASMYDGATALAEGVLLALRETGRMGVLVSQGVHPEYRAVLRAYLEAVGAKLLTLPL- 183 (438)
T ss_dssp HHHHHHHHHHH------TSSEECSCBSSHHHHHHHHHHHHHHHHTCCEEEEETTSCHHHHHHHHHHHHHTTCEEEEECC-
T ss_pred HHHHHHHHHHh------CCCccceEEeCcHHHHHHHHHHHHhcCCCCEEEEcCccCHhHHHHHHHHHHHCCCEEEEEcC-
Confidence 45566666665 34667889999999444433333 2368999999999999887554 458999999886
Q ss_pred CCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccc-cCCcccCCCCcccccccCC
Q 014936 155 PDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEV-YGHLVFGDKPFVPMGVFGS 233 (415)
Q Consensus 155 ~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~-~~~~~~~~~~~~~~~~~~~ 233 (415)
.++.+|+++ +++++++|++++| ||||.+. ++++|+++|+++|+++++|.. ++...+. .+ ..++.
T Consensus 184 --~~~~~d~~~----i~~~t~~v~i~~p-n~tG~~~---~l~~i~~la~~~g~~vivd~d~~a~g~~~----~~-~~~g~ 248 (438)
T 1wyu_A 184 --EGGRTPLPE----VGEEVGAVVVQNP-NFLGALE---DLGPFAEAAHGAGALFVAVADPLSLGVLK----PP-GAYGA 248 (438)
T ss_dssp --BTTBCCCCC----CCTTEEEEEEESS-CTTSBCC---CHHHHHHHHHHTTCEEEEECCTTGGGTBC----CH-HHHTC
T ss_pred --cCCccCHHH----hCCCeEEEEEECC-CCCeEEe---cHHHHHHHHHHcCCEEEEEechhhccCcC----CC-ccCCC
Confidence 234577766 5678999999999 9999996 588888899999999996633 2221111 11 22333
Q ss_pred CCCeEEEccCccccC----CCCceEEEEEeeCCCCCCChHHHHHHH----------------------------Hhhccc
Q 014936 234 TVPILTLGSLSKRWI----VPGWRLGWFVTTDPCGMFRKPKVVERM----------------------------KKYFDI 281 (415)
Q Consensus 234 ~~~~i~~~s~sK~~~----~~G~r~G~~~~~~~~~~~~~~~~~~~~----------------------------~~~~~~ 281 (415)
+ ++++| +|.|+ +.|.++||+++++. +.+.+ +....
T Consensus 249 D---~~~~s-~kk~~~~~~~~Gp~~G~l~~~~~--------~~~~l~~~~~g~~~~~~~~~~~~~~l~~~~~~~r~~~~- 315 (438)
T 1wyu_A 249 D---IAVGD-GQSLGLPMGFGGPHFGFLATKKA--------FVRQLPGRLVSETVDVEGRRGFILTLQAREQYIRRAKA- 315 (438)
T ss_dssp S---EEEEE-CTTTTCCCGGGCSCCEEEEECGG--------GGGGCCSCCEEEEEBTTSCEEEEECCGGGSHHHHGGGS-
T ss_pred C---EEEEC-CcccCCCccCCCCCeeEEEEcHH--------HHHhCCCceeccccccCCCcceeeeccccccccchhcc-
Confidence 2 55556 56544 45668999998752 22221 11111
Q ss_pred cCCc---hhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCccccCCCCCHHH
Q 014936 282 LGDP---ATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLDDIIDDID 358 (415)
Q Consensus 282 ~~~~---~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~ 358 (415)
+... +.....++..++.....+.+++..+++.++++++.+.|++++|+.+. .+. ..|.++.+... .+..+
T Consensus 316 t~~~~~~~~~~a~~aa~~l~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~g~~~~-~~~-~~~~~~~~~~~-----~~~~~ 388 (438)
T 1wyu_A 316 KSNITTNAQLTALMGAMYLAALGPEGLREVALKSVEMAHKLHALLLEVPGVRPF-TPK-PFFNEFALALP-----KDPEA 388 (438)
T ss_dssp SCCCCSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTCEEC-SCS-SBCSEEEEECS-----SCHHH
T ss_pred cCCccchHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEC-CCC-CeEEEEEEeCC-----CCHHH
Confidence 1111 22222222222332223567888899999999999999999888843 443 33322222211 14667
Q ss_pred HHHHHHhhcCeEE--EcCCCCCCCCeEEEEee--CChhhHHHHHHHHHHHH
Q 014936 359 FCFKLAKEESVII--LPGTAVGLKNWLRVTFA--VDPYSLEECLDRIKSFY 405 (415)
Q Consensus 359 ~~~~ll~~~gi~v--~~g~~~~~~~~iRi~~~--~~~~~l~~~l~~l~~~~ 405 (415)
+...|+ ++||.+ .++..|. ++++||++. +++++++.++++|++++
T Consensus 389 ~~~~L~-~~gi~v~~~~~~~~~-~~~lRis~~~~~t~edi~~~~~~l~~~l 437 (438)
T 1wyu_A 389 VRRALA-ERGFHGATPVPREYG-ENLALFAATELHEEEDLLALREALKEVL 437 (438)
T ss_dssp HHHHHH-HTTCCCCEECCTTSC-SSEEEEECCTTCCHHHHHHHHHHHHHHC
T ss_pred HHHHHH-HCCceeccccccccC-CCeEEEEecccCCHHHHHHHHHHHHHHh
Confidence 777775 469998 6776554 689999996 68999999999998753
No 220
>3jzl_A Putative cystathionine beta-lyase involved in ALU resistance; putative cystathionine beta-lyase involved in aluminum resis structural genomics; HET: LLP; 1.91A {Listeria monocytogenes str} PDB: 3fd0_A*
Probab=99.92 E-value=1.5e-23 Score=197.21 Aligned_cols=268 Identities=16% Similarity=0.149 Sum_probs=191.0
Q ss_pred HHHHHHHHHHHhc------CCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEE---eCChHHHHHHHHHHhcCCCC
Q 014936 55 HVATEAVAEALLS------EKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFV---TSGCTQAIDVAMALLSRPGA 125 (415)
Q Consensus 55 ~~~~~a~~~~~~~------~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i---~~g~~~al~~~~~~l~~~gd 125 (415)
.++.+++.+.... ...+.|++. +..+|++.+|++++ .+..++ ++||++++..++.+++++||
T Consensus 32 ~~vl~a~~~~~~~~~~~~~~~~~~y~~~-~~~~Le~~lA~l~g--------~e~alv~p~~~sGt~Ai~~al~all~~GD 102 (409)
T 3jzl_A 32 AKVLDAFQENKVSDFHFHPSTGYGYDDE-GRDTLERVYATVFK--------TEAALVRPQIISGTHAISTVLFGILRPDD 102 (409)
T ss_dssp HHHHHHHHHTTCCGGGGCCCCTTCTTCH-HHHHHHHHHHHHHT--------CSEEEEETTSCSHHHHHHHHHHHHCCTTC
T ss_pred HHHHHHHHHhhhhhhccCCCcCCCCChh-HHHHHHHHHHHHhC--------CCcEEEECCCccHHHHHHHHHHHhcCCCC
Confidence 5577777765321 123456663 67889999999983 344555 88999999999999999999
Q ss_pred EEEEcC-CCCcchHHH----------HHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecC----CCCccccCC
Q 014936 126 NILLPR-PGFPIYELS----------AAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIIN----PGNPCGNVY 190 (415)
Q Consensus 126 ~vi~~~-p~y~~~~~~----------~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~----p~nptG~~~ 190 (415)
+|+++. +.|..+... ++..|+++..++.++ ++.+|++++++++++++++|++++ |+||||.+
T Consensus 103 ~Vl~~~~~~y~~~~~~~~~~g~~~~~l~~~G~~~~~v~~~~--~g~~d~e~l~~ai~~~tklV~i~~s~g~p~nptg~v- 179 (409)
T 3jzl_A 103 ELLYITGQPYDTLEEIVGIRKQGQGSLKDFHIGYSSVPLLE--NGDVDFPRIAKKMTPKTKMIGIQRSRGYADRPSFTI- 179 (409)
T ss_dssp EEEECSSSCCTTHHHHHTSSSSSSSCTGGGTCEEEECCCCT--TSCCCHHHHHHHCCTTEEEEEEECSCTTSSSCCCCH-
T ss_pred EEEEeCCCCcHhHHHHHhcccchhhHHHHcCCEEEEeCCCC--CCCcCHHHHHHhccCCCeEEEEECCCCCCCCCcCcc-
Confidence 999998 999988753 456789998888753 456899999999999999999999 99999988
Q ss_pred CHHHHHHHHHHHhh--cCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCC-ceEEEEEeeCCCCCCC
Q 014936 191 SYQHLQKLAETANK--LKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPG-WRLGWFVTTDPCGMFR 267 (415)
Q Consensus 191 ~~~~l~~i~~~~~~--~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~ 267 (415)
.++++|+++|++ +|+++++|++|+.+.+...+ . ..+. .++++|+||.++.+| ...||+++++
T Consensus 180 --~~l~~I~~la~~~~~~~~livD~a~~~~~~~~~p---~-~~g~---Div~~S~sK~lgg~~~~~GG~v~~~~------ 244 (409)
T 3jzl_A 180 --EKIKEMIVFVKNINPEVIVFVDNCYGEFVEYQEP---P-EVGA---DIIAGSLIKNPGGGLAKTGGYIAGKE------ 244 (409)
T ss_dssp --HHHHHHHHHHHHHCTTCEEEEECTTCTTTSSCCS---G-GGTC---SEEEEETTSGGGTTTCSSCEEEEECH------
T ss_pred --ccHHHHHHHHHhhCCCCEEEEeCCcccccccCCc---c-ccCC---eEEEECccccCCccCCceEEEEEeCH------
Confidence 889999999999 99999999999876643221 1 1222 388999999987766 4468888864
Q ss_pred hHHHHHHHHhhccc-----cCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCce---
Q 014936 268 KPKVVERMKKYFDI-----LGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSM--- 339 (415)
Q Consensus 268 ~~~~~~~~~~~~~~-----~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~--- 339 (415)
++++.+...... ...+......++...+ ..+..++++..+++..+.+.|+++ ++. + .|..+.
T Consensus 245 --~li~~l~~~~~~~~~g~~~g~~~~~~~~~l~gl-----~~~~~r~~~~~~~a~~la~~L~~~-g~~-v-~p~~~~~~~ 314 (409)
T 3jzl_A 245 --ALVDLCGYRLTTPGIGREAGASLYSLLEMYQGF-----FLAPHVTAQAIKGARFTAAMLAEF-GVE-A-DPVWDAPRT 314 (409)
T ss_dssp --HHHHHHHHHHSCTTTGGGCCCCTTCHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHT-TCE-E-ESCTTSCCS
T ss_pred --HHHHHHHHHhccccccccccccHHHHHHHHHHH-----hhHHHHHHHHHHHHHHHHHHHHhC-CCc-c-cCCCCCCCc
Confidence 688877663211 1122221123344444 235677788899999999999988 555 3 333322
Q ss_pred --EEEEecCccccCCCCCHHHHHHHHH
Q 014936 340 --AVMLKLNLSLLDDIIDDIDFCFKLA 364 (415)
Q Consensus 340 --~~~~~l~~~~~~~~~~~~~~~~~ll 364 (415)
.+.+.++.. ....+++..+.
T Consensus 315 ~~i~~i~l~~~-----~~~~~~~~~L~ 336 (409)
T 3jzl_A 315 DLIQSVSFHNK-----EKMVAFAQAIQ 336 (409)
T ss_dssp SSCCEEECSCH-----HHHHHHHHHHH
T ss_pred cEEEEEEeCCH-----HHHHHHHHHHH
Confidence 555566421 13445666653
No 221
>3hvy_A Cystathionine beta-lyase family protein, YNBB B.S ortholog; NP_348457.1, putative cystathionine beta-lyase involved in A resistance; HET: LLP MSE; 2.00A {Clostridium acetobutylicum}
Probab=99.92 E-value=1.7e-23 Score=197.51 Aligned_cols=254 Identities=16% Similarity=0.137 Sum_probs=184.5
Q ss_pred HHHHHHHHHHHhc------CCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEE---eCChHHHHHHHHHHhcCCCC
Q 014936 55 HVATEAVAEALLS------EKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFV---TSGCTQAIDVAMALLSRPGA 125 (415)
Q Consensus 55 ~~~~~a~~~~~~~------~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i---~~g~~~al~~~~~~l~~~gd 125 (415)
+.+.+++.+.... ...+.|++. +..+|++.+|+++ ..+..++ ++||++|+..++.+++++||
T Consensus 47 ~~Vl~a~~~~~~~~~~~~~~~gy~Y~~~-g~~~Le~~lA~l~--------g~e~alv~p~~~sGt~A~~~al~all~pGD 117 (427)
T 3hvy_A 47 LKVLKAFQEERISESHFTNSSGYGYNDI-GRDSLDRVYANIF--------NTESAFVRPHFVNGTHAIGAALFGNLRPND 117 (427)
T ss_dssp HHHHHHHHHTTCCGGGSCCCCTTCTTCH-HHHHHHHHHHHHH--------TCSEEEEETTCCSHHHHHHHHHHHTCCTTC
T ss_pred HHHHHHHHHHHHHHHhcccCcCCCCCch-hHHHHHHHHHHHh--------CCCceEEeCCCCcHHHHHHHHHHHhcCCCC
Confidence 6778888775332 122456664 6789999999998 3344566 88999999999999999999
Q ss_pred EEEEcC-CCCcchHH-----------HHHhCCCeEEEeeccCCCCCCCChhHHHhhcC--CCceEEEecC----CCCccc
Q 014936 126 NILLPR-PGFPIYEL-----------SAAFRHIEVRHFDLLPDKGWEVDLDDIESLAD--QNTVALVIIN----PGNPCG 187 (415)
Q Consensus 126 ~vi~~~-p~y~~~~~-----------~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~v~i~~----p~nptG 187 (415)
+|++++ |.|..+.. .++..|+++..++. .++.+|+++++++++ +++++|++++ |+||||
T Consensus 118 ~Vl~~~~~~y~~~~~~~g~~~~~~~~~l~~~G~~~~~v~~---~~~~~d~e~l~~~i~~~~~tklV~i~~s~gyp~nptg 194 (427)
T 3hvy_A 118 TMMSICGMPYDTLHDIIGMDDSKKVGSLREYGVKYKMVDL---KDGKVDINTVKEELKKDDSIKLIHIQRSTGYGWRKSL 194 (427)
T ss_dssp EEEECSSSCCGGGHHHHTCCTTCCSCCTGGGTCEEEECCC---BTTBCCHHHHHHHHHHCTTEEEEEEESSCCSSSSCCC
T ss_pred EEEEeCCCCchhHHHHhccccchhhhHHHHcCCEEEEecC---CCCCcCHHHHHHHhhCCCCCEEEEEECCCCCCCCccc
Confidence 999999 99988763 34567899888876 345789999999998 7899999999 999998
Q ss_pred cCCCHHHHHHHHHHHhh--cCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCC-ceEEEEEeeCCCC
Q 014936 188 NVYSYQHLQKLAETANK--LKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPG-WRLGWFVTTDPCG 264 (415)
Q Consensus 188 ~~~~~~~l~~i~~~~~~--~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~ 264 (415)
.+ .++++|+++|++ +|+++++|++|+.+.+... +. ..+. .++++|+||.++.+| .+.||+++++
T Consensus 195 ~v---~dl~~i~~ia~~~~~g~~livD~a~~~~~~~~~---p~-~~ga---Div~~S~sK~lgg~g~~~GG~i~~~~--- 261 (427)
T 3hvy_A 195 RI---AEIAEIIKSIREVNENVIVFVDNCYGEFVEEKE---PT-DVGA---DIIAGSLIKNIGGGIATTGGYIAGKE--- 261 (427)
T ss_dssp CH---HHHHHHHHHHHHHCSSSEEEEECTTCTTTSSSC---GG-GGTC---SEEEEETTSGGGTTTCCSCEEEEECH---
T ss_pred cH---HHHHHHHHHHHHhCCCCEEEEECCccccccCCC---Cc-ccCC---eEEEECCcccccccccceEEEEEECH---
Confidence 77 899999999999 8999999999987654322 11 1222 388999999987655 5568888854
Q ss_pred CCChHHHHHHHHhhcccc-----CCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCce
Q 014936 265 MFRKPKVVERMKKYFDIL-----GDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSM 339 (415)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~-----~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~ 339 (415)
++++.++...... ..++.....++...+ ..+..+.++..+++..+.+.|+++ ++. + .|..+.
T Consensus 262 -----~li~~l~~~~~~~~~g~~~~~~~~~a~~~~~gl-----~~~~~r~~~~~~~a~~la~~L~~~-g~~-V-~p~~~~ 328 (427)
T 3hvy_A 262 -----EYVTQATFRVTVPGIGGECGSTFGVMRSLYEGL-----FMAPHVTIEAVKGAVFCARIMELA-GFD-V-LPKYND 328 (427)
T ss_dssp -----HHHHHHHHHHSCTTTGGGCCCCTTCHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHT-TCE-E-ESCTTS
T ss_pred -----HHHHHHHHHhhcCCcccccCCCHHHHHHHHHhH-----hHHHHHHHHHHHHHHHHHHHHHhC-CCe-e-cCCCCC
Confidence 6888887642211 111111123333333 235667788889999999999988 555 3 343333
Q ss_pred -----EEEEecC
Q 014936 340 -----AVMLKLN 346 (415)
Q Consensus 340 -----~~~~~l~ 346 (415)
.+.+.+.
T Consensus 329 ~~~~li~~~~l~ 340 (427)
T 3hvy_A 329 KRTDIIQAIKFN 340 (427)
T ss_dssp CCSSSEEEEECS
T ss_pred CCceEEEEEeCC
Confidence 6666664
No 222
>3i16_A Aluminum resistance protein; YP_878183.1, carbon-sulfur lyase involved in aluminum resist structural genomics; HET: MSE TLA PLP; 2.00A {Clostridium novyi} PDB: 3gwp_A*
Probab=99.91 E-value=3.7e-23 Score=195.16 Aligned_cols=267 Identities=18% Similarity=0.170 Sum_probs=189.7
Q ss_pred HHHHHHHHHHHhc------CCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEE---eCChHHHHHHHHHHhcCCCC
Q 014936 55 HVATEAVAEALLS------EKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFV---TSGCTQAIDVAMALLSRPGA 125 (415)
Q Consensus 55 ~~~~~a~~~~~~~------~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i---~~g~~~al~~~~~~l~~~gd 125 (415)
+.+.+++.+.... ...+.|+.. +..+|++.+|++++ .+..++ ++||++++..++.+++++||
T Consensus 46 ~~Vl~A~~~~~~~~~~~~~~~gy~y~~~-~~~~Le~~lA~l~g--------~e~alv~p~~~sGt~Ai~~al~all~pGD 116 (427)
T 3i16_A 46 LKVLNAFQEERISEAHFTNSSGYGYGDI-GRDSLDAVYARVFN--------TESALVRPHFVNGTHALGAALFGNLRPGN 116 (427)
T ss_dssp HHHHHHHHHTTCCGGGSCCCCTTCTTCH-HHHHHHHHHHHHHT--------CSEEEEETTCCSHHHHHHHHHHHHCCTTC
T ss_pred HHHHHHHHHhchhHHhcCCCCCCCCCHH-HHHHHHHHHHHHhC--------CcceEEeCCCccHHHHHHHHHHHHhCCCC
Confidence 5677777664321 122355553 67889999999983 333455 88899999999999999999
Q ss_pred EEEEcC-CCCcchHH-----------HHHhCCCeEEEeeccCCCCCCCChhHHHhhcC--CCceEEEecC----CCCccc
Q 014936 126 NILLPR-PGFPIYEL-----------SAAFRHIEVRHFDLLPDKGWEVDLDDIESLAD--QNTVALVIIN----PGNPCG 187 (415)
Q Consensus 126 ~vi~~~-p~y~~~~~-----------~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~v~i~~----p~nptG 187 (415)
+|+++. |.|..+.. .++..|+++..++.+. ++.+|+++++++++ +++++|++++ |+||+|
T Consensus 117 ~Vl~~~~~~y~~~~~~~g~~~~~~~~~l~~~G~~~~~v~~~~--~g~~D~e~l~~~l~~~~~tklV~i~~s~~~p~nptg 194 (427)
T 3i16_A 117 TMLSVCGEPYDTLHDVIGITENSNMGSLKEFGINYKQVDLKE--DGKPNLEEIEKVLKEDESITLVHIQRSTGYGWRRAL 194 (427)
T ss_dssp EEEESSSSCCGGGHHHHTCSCCCSSCCTGGGTCEEEECCCCT--TSSCCHHHHHHHHHTCTTEEEEEEECSCCSSSSCCC
T ss_pred EEEEeCCCccHHHHHHHhccccchHHHHHHcCCEEEEecCcc--CCCcCHHHHHHHhhCCCCCEEEEEEcCCCCCCCCcc
Confidence 999999 99998774 3456789998888753 34689999999998 7899999999 999998
Q ss_pred cCCCHHHHHHHHHHHhh--cCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCC-ceEEEEEeeCCCC
Q 014936 188 NVYSYQHLQKLAETANK--LKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPG-WRLGWFVTTDPCG 264 (415)
Q Consensus 188 ~~~~~~~l~~i~~~~~~--~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~ 264 (415)
.+ .++++|+++|++ +|+++++|++|+.+.+... +. ..+. .++++|+||.++.+| .+.||+++++
T Consensus 195 ~i---~dl~~i~~la~~~~~g~~livD~a~~~~~~~~~---p~-~~ga---Div~~S~sK~lgg~g~~~gG~i~~~~--- 261 (427)
T 3i16_A 195 LI---EDIKSIVDCVKNIRKDIICFVDNCYGEFMDTKE---PT-DVGA---DLIAGSLIKNIGGGIAPTGGYLAGTK--- 261 (427)
T ss_dssp CH---HHHHHHHHHHHHHCTTSEEEEECTTTTTSSSSC---GG-GGTC---SEEEEETTSGGGTTTCCSCEEEEECH---
T ss_pred cH---HHHHHHHHHHHHhCCCCEEEEECCCccccccCC---cc-ccCC---eEEEecCcccCCCCCCceEEEEEECH---
Confidence 77 899999999999 9999999999987664322 11 1222 388999999987766 6779998864
Q ss_pred CCChHHHHHHHHhhcc---ccCCchh-HH-HHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCce
Q 014936 265 MFRKPKVVERMKKYFD---ILGDPAT-FI-QAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSM 339 (415)
Q Consensus 265 ~~~~~~~~~~~~~~~~---~~~~~~~-~~-~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~ 339 (415)
++++.++.... ......+ .. ...+...+ ..+..+.++..+++..+.+.|+++ ++. + .|..+.
T Consensus 262 -----~li~~l~~~~~~~~~g~~~~~~~~~a~~~l~gl-----~~~~~r~~~~~~~a~~la~~L~~~-g~~-V-~p~~~~ 328 (427)
T 3i16_A 262 -----DCIEKTSYRLTVPGIGGECGSTFGVVRSMYQGL-----FLAPHISMEALKGAILCSRIMELA-GFE-V-MPKYDE 328 (427)
T ss_dssp -----HHHHHHHHHHSCTTTGGGCCCCTTCHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHT-TCE-E-ESCTTS
T ss_pred -----HHHHHHHHhcccCccCccCCccHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHhC-CCe-e-cCCCCC
Confidence 68888876422 1111111 21 23333333 335678888999999999999988 455 3 444333
Q ss_pred -----EEEEecCccccCCCCCHHHHHHHH
Q 014936 340 -----AVMLKLNLSLLDDIIDDIDFCFKL 363 (415)
Q Consensus 340 -----~~~~~l~~~~~~~~~~~~~~~~~l 363 (415)
.+.+.+... ....++++.+
T Consensus 329 ~~~~~i~~i~l~~~-----~~~~~f~~~l 352 (427)
T 3i16_A 329 KRSDIIQSIKFNDK-----DKLIEFCKGI 352 (427)
T ss_dssp CCSSSCEEEECSSH-----HHHHHHHHHH
T ss_pred CCccEEEEEEECCH-----HHHHHHHHHH
Confidence 666666421 1234555555
No 223
>1c4k_A Protein (ornithine decarboxylase); lyase; HET: PLP GTP; 2.70A {Lactobacillus SP} SCOP: c.23.1.4 c.67.1.5 d.125.1.1 PDB: 1ord_A*
Probab=99.91 E-value=8.4e-23 Score=204.20 Aligned_cols=309 Identities=14% Similarity=0.068 Sum_probs=204.1
Q ss_pred CCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHH-HHhCCCeEEEeeccC
Q 014936 77 AGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELS-AAFRHIEVRHFDLLP 155 (415)
Q Consensus 77 ~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~-~~~~g~~~~~~~~~~ 155 (415)
.-+.++++.+|++++ . .+.+++++|+++++.+++.+++++||+|+++.++|.++... ++..|++++.++...
T Consensus 173 ~~i~e~e~~lA~~~g------a-e~~i~v~nGtt~an~~ai~al~~pGD~VLv~~~~H~S~~~~~~~l~Ga~~v~v~~~~ 245 (730)
T 1c4k_A 173 GPAVAAEKHAARVYN------A-DKTYFVLGGSSNANNTVTSALVSNGDLVLFDRNNHKSVYNSALAMAGGRPVYLQTNR 245 (730)
T ss_dssp THHHHHHHHHHHHTT------C-SEEEEESSHHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHTTTTCCEEEEECEEE
T ss_pred HHHHHHHHHHHHHHC------C-CcEEEECCHHHHHHHHHHHHhcCCCCEEEEcCCchHHHHHHHHHHCCCEEEEEeCCc
Confidence 446899999999983 2 34578889999999999999999999999999999998888 888899998887543
Q ss_pred CCCCC----CChhHH-----HhhcCCC------c----eEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccC
Q 014936 156 DKGWE----VDLDDI-----ESLADQN------T----VALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYG 216 (415)
Q Consensus 156 ~~~~~----~~~~~l-----~~~~~~~------~----~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~ 216 (415)
. +++ +|+++| +++++++ + +++++++| ||+|.+. ++++|+++|+++|+++++|++|+
T Consensus 246 ~-~~~i~g~id~e~L~~~~le~~i~~~~~~~~~t~~~vklviv~~p-n~~G~v~---dl~~I~~la~~~g~~livDeAh~ 320 (730)
T 1c4k_A 246 N-PYGFIGGIYDSDFDEKKIRELAAKVDPERAKWKRPFRLAVIQLG-TYDGTIY---NAHEVVKRIGHLCDYIEFDSAWV 320 (730)
T ss_dssp C-TTCCEEEECGGGSCHHHHHHHTTTSSHHHHTCSCCBSEEEEESB-CTTSEEE---CHHHHHHHHGGGBSEEEEECTTC
T ss_pred c-ccCccCCCCHHHHhhhHHHHHhhcCCcccccccCCCeEEEEECC-CCCCeec---CHHHHHHHHHHcCCeEEEEcccc
Confidence 2 233 688888 8888765 4 78999999 5899995 57889999999999999999997
Q ss_pred Cc-ccCCCC--ccccc--ccCC-CCCeEEEccCccccCCCCceE-EEEEeeCCCC-----CCChHHHHHHHHhh--cccc
Q 014936 217 HL-VFGDKP--FVPMG--VFGS-TVPILTLGSLSKRWIVPGWRL-GWFVTTDPCG-----MFRKPKVVERMKKY--FDIL 282 (415)
Q Consensus 217 ~~-~~~~~~--~~~~~--~~~~-~~~~i~~~s~sK~~~~~G~r~-G~~~~~~~~~-----~~~~~~~~~~~~~~--~~~~ 282 (415)
.. .+++.. ..++. .++. +.+++++.|+||++ +|++. |++++++... ... ...++.. ...+
T Consensus 321 ~~~~f~~~~~g~~~l~~~~~g~D~~~~iv~~S~hK~L--~g~~~gg~I~v~~~~l~g~~~~i~----~~~~~~~~~~~~s 394 (730)
T 1c4k_A 321 GYEQFIPMMRNSSPLLIDDLGPEDPGIIVVQSVHKQQ--AGFSQTSQIHKKDSHIKGQLRYCD----HKHFNNSFNLFMS 394 (730)
T ss_dssp CGGGSSGGGGGGCTTSCCCCCTTSCEEEEEECHHHHS--SCCTTCEEEEEECGGGTTSTTCCC----HHHHHHHHHHHSC
T ss_pred cccccCcccCCcCcccccccCCCCCCEEEEECCCCCC--CCCCCEEEEEecchhhcCcccccC----HHHHHHHHHHhCC
Confidence 53 343211 11221 1222 23579999999984 45544 5665654321 111 1122222 1123
Q ss_pred CCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhc-CCCCcCCCCCC-------------------------
Q 014936 283 GDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKE-IPCISCPHKPE------------------------- 336 (415)
Q Consensus 283 ~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~~~~~~~~~p~------------------------- 336 (415)
.+++.....++..++.....+...++.+++.++.+.+++.|++ ++++.++ .|.
T Consensus 395 tsp~~~~iaal~aA~~~l~~~~g~~~~~~~~~~a~~lr~~L~~~i~g~~v~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 473 (730)
T 1c4k_A 395 TSPFYPMYAALDVNAAMQEGEAGRKLWHDLLITTIEARKKLIKAGSMFRPF-VPPVVNGKKWEDGDTEDMANNIDYWRFE 473 (730)
T ss_dssp SSCCHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHTTCSSEES-SCSEETTEEGGGSCHHHHTTCGGGGBCC
T ss_pred CCCcHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHhhhCCCeEEc-cccccccccccccccccccccchhhccC
Confidence 4455555554444443222223455667788888888888887 6777633 331
Q ss_pred ------------Cc-eE-----EEEecCc-----cccCC-CCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEee--CC
Q 014936 337 ------------GS-MA-----VMLKLNL-----SLLDD-IIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFA--VD 390 (415)
Q Consensus 337 ------------~g-~~-----~~~~l~~-----~~~~~-~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~--~~ 390 (415)
.+ ++ +.+..+. ....+ ..+..++...| +++||.+.... ...+|++++ .+
T Consensus 474 ~~~~~~g~~~~~~~~~~idp~kv~i~~pg~~~~~g~~~~~g~~~~~l~~~L-~e~GI~v~~~~----~~~ir~~~s~g~t 548 (730)
T 1c4k_A 474 KGAKWHAYEGYGDNQYYVDPNKFMLTTPGINPETGDYEDFGVPATIVANYL-RDHGIIPEKSD----LNSILFLMTPAET 548 (730)
T ss_dssp TTCTTTCCTTCCTTCEEECTTEEEEECSSEETTTTEECSSCCCHHHHHHHH-HHTTCCCSEEC----SSEEEEECCTTCC
T ss_pred ccchhccccccCCcccccCCeEEEEEeCCcccccccccccCCCHHHHHHHH-HHCCcEEEECC----CCeEEEEeCCCCC
Confidence 11 11 3343421 00000 12455665555 55699886532 467899884 68
Q ss_pred hhhHHHHHHHHHHHHHHHH
Q 014936 391 PYSLEECLDRIKSFYQRHA 409 (415)
Q Consensus 391 ~~~l~~~l~~l~~~~~~~~ 409 (415)
+++++.+++.|.++.+.+.
T Consensus 549 ~e~i~~Ll~aL~~i~~~~~ 567 (730)
T 1c4k_A 549 PAKMNNLITQLLQLQRLIE 567 (730)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcc
Confidence 8999999999999887654
No 224
>3ht4_A Aluminum resistance protein; lyase, putative cystathionine BEAT-lyase, aluminium resistance protein, Q81A77_baccr, NESG, BCR213; 2.90A {Bacillus cereus atcc 14579}
Probab=99.90 E-value=7.5e-23 Score=194.12 Aligned_cols=277 Identities=16% Similarity=0.170 Sum_probs=183.8
Q ss_pred cHHHHHHHHHHHhcC------CCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEE
Q 014936 54 THVATEAVAEALLSE------KFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANI 127 (415)
Q Consensus 54 ~~~~~~a~~~~~~~~------~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~v 127 (415)
.+.+.+++.+..... ..+.|++ .+..++++.+++++ |......+++++ ||++|+..++.+++++||+|
T Consensus 37 ~~~vl~A~~~~~~~~~~~~~~~g~~y~~-~~~~~l~~~la~~~----g~~~~~~~i~~~-sGt~Ai~~al~al~~~Gd~V 110 (431)
T 3ht4_A 37 QFRVLESFGKHKISDSHFIPTTGYGYDD-IGRDTLEKVYADVF----GAEAGLVRPQII-SGTHAISTALFGILRPGDEL 110 (431)
T ss_dssp HHHHHHHHHHTTCCGGGSCCCCTTCCSC-HHHHHHHHHHHHHT----TCSEECCBTTSC-SHHHHHHHHHHTTCCTTCEE
T ss_pred HHHHHHHHHHhchhhhhcCCCCCCCCCh-hhHHHHHHHHHHHh----CCCcccccceee-CHHHHHHHHHHHhCCCCCEE
Confidence 356777776643211 1123333 23344555555554 422222233345 67899999999999999999
Q ss_pred EEcC-CCCcchHHHH----------HhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEec-CCCCccccCCCHHHH
Q 014936 128 LLPR-PGFPIYELSA----------AFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVII-NPGNPCGNVYSYQHL 195 (415)
Q Consensus 128 i~~~-p~y~~~~~~~----------~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~-~p~nptG~~~~~~~l 195 (415)
+++. |.|..+...+ +..|++++.++.++ ++.+|+++|++++++++++|+++ +|+||+|..++.+++
T Consensus 111 l~~~~~~y~~~~~~~~l~g~~~~~~~~~G~~~~~v~~~~--~~~~d~e~l~~~l~~~tk~V~i~~sp~np~~~~~~~~~l 188 (431)
T 3ht4_A 111 LYITGKPYDTLEEIVGVRGKGVGSFKEYNIGYNAVPLTE--GGLVDFEAVAAAIHSNTKMIGIQRSKGYATRPSFTISQI 188 (431)
T ss_dssp EECSSSCCTTHHHHTTSSSCSSSCSGGGTCEEEECCBCT--TSSBCHHHHHHHCCTTEEEEEEECSCTTSSSCCCCHHHH
T ss_pred EEeCCCCchhHHHHHhhcccccchHHHcCCEEEEeCCCC--CCCcCHHHHHhhcCCCCeEEEEECCCCCCCCCcCCHHHH
Confidence 9998 9999887654 44789999988754 36799999999999999999999 589999999999999
Q ss_pred HHHHHHHhh--cCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCC-CCceEEEEEeeCCCCCCChHHHH
Q 014936 196 QKLAETANK--LKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIV-PGWRLGWFVTTDPCGMFRKPKVV 272 (415)
Q Consensus 196 ~~i~~~~~~--~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~-~G~r~G~~~~~~~~~~~~~~~~~ 272 (415)
++|+++|++ +|+++|+|++|+.+.+.... ..++. .++++|+||.++. .+...||+++++ +++
T Consensus 189 ~~i~~la~~~~~~~~livDea~~~~~~~~~~----~~~g~---Di~~~S~sK~lgg~~~~~GG~v~~~~--------~li 253 (431)
T 3ht4_A 189 KEMIAFVKEIKPDVVVFVDNCYGEFIEEQEP----CHVGA---DLMAGSLIKNPGGGIVKTGGYIVGKE--------QYV 253 (431)
T ss_dssp HHHHHHHHHHCTTCEEEEECTTCTTSSSCCG----GGTTC---SEEEEETTSGGGTTTCSSCEEEEECH--------HHH
T ss_pred HHHHHHHHhhCCCCEEEEeCCChhhccCCCc----cccCC---eEEEcCccccCCCCCCCceEEEEecH--------HHH
Confidence 999999999 99999999999987754331 12222 2889999998654 223449999864 677
Q ss_pred HHHHhhccc---c--CCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCC---CCCCCceEEEEe
Q 014936 273 ERMKKYFDI---L--GDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCP---HKPEGSMAVMLK 344 (415)
Q Consensus 273 ~~~~~~~~~---~--~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~---~~p~~g~~~~~~ 344 (415)
+.++..... . ..++.....++...+ ..+..+.++..+++..+.+.|+++ ++.+. ..+..+..+.+.
T Consensus 254 ~~l~~~~~~~~~g~~~~~~~~~~~~~~~~l-----~~~~~~~~~~~~~a~~l~~~L~~~-g~~v~p~~~~~~~~li~~i~ 327 (431)
T 3ht4_A 254 EACAYRLTSPGIGAEAGASLYSLQEMYQGF-----FLAPHVAGQALKGAIFTAAFLEKL-GMNTSPAWNAPRTDLIQSVQ 327 (431)
T ss_dssp HHHHHHHSCTTTTTSCSCCCSCSHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHH-TCCEESCTTSCCSSSCCEEE
T ss_pred HHHHHHhccCCcccccCccHHHHHHHHhHh-----hhHHHHHHHHHHHHHHHHHHHHhC-cCEecCCCCCCCccEEEEEE
Confidence 777664221 1 111111123333333 235667788888899999999887 44421 012233356666
Q ss_pred cCccccCCCCCHHHHHHHHH
Q 014936 345 LNLSLLDDIIDDIDFCFKLA 364 (415)
Q Consensus 345 l~~~~~~~~~~~~~~~~~ll 364 (415)
++.. ....+++..+.
T Consensus 328 l~~~-----~~~~~~~~~l~ 342 (431)
T 3ht4_A 328 FDDK-----DRMIAFCQAIQ 342 (431)
T ss_dssp CCCH-----HHHHHHHHHHH
T ss_pred eCCH-----HHHHHHHHHHH
Confidence 6421 12345666553
No 225
>3e77_A Phosphoserine aminotransferase; SERC, PLP, structural genomi structural genomics consortium, SGC, amino-acid biosynthesi aminotransferase; HET: PLP; 2.50A {Homo sapiens}
Probab=99.90 E-value=4e-22 Score=184.68 Aligned_cols=326 Identities=14% Similarity=0.051 Sum_probs=219.0
Q ss_pred CCCcHHHHHHHHHHHhcCCCC---CC--CC-----CCCcHHHHHHHHHHHhhhCCCCCCC-CcEEE-eCChHHHHHHHHH
Q 014936 51 FHTTHVATEAVAEALLSEKFN---GY--AP-----TAGLPLTRRAIAEYLSRDLPYKLTP-NDVFV-TSGCTQAIDVAMA 118 (415)
Q Consensus 51 ~~~~~~~~~a~~~~~~~~~~~---~y--~~-----~~g~~~lr~~ia~~~~~~~~~~~~~-~~i~i-~~g~~~al~~~~~ 118 (415)
.+.+++|.+++.+.+.....+ .+ .. ..-+.+.|+.+++++ ++++ ++|++ |+|+|+++++++.
T Consensus 22 ~~~p~~Vl~a~~~~~~~~~~n~~s~~~~~hr~~~~~~~~~~ar~~la~ll------~~~~~~evif~t~~~T~a~n~a~~ 95 (377)
T 3e77_A 22 SMLPHSVLLEIQKELLDYKGVGISVLEMSHRSSDFAKIINNTENLVRELL------AVPDNYKVIFLQGGGCGQFSAVPL 95 (377)
T ss_dssp CCCCHHHHHHHHHTSSSGGGSSSCTTTCCTTSHHHHHHHHHHHHHHHHHH------TCCTTEEEEEESSHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHhcccCCccccccCCCCHHHHHHHHHHHHHHHHHh------CCCCCCeEEEEcCchHHHHHHHHH
Confidence 678899999999877531100 00 00 122466788888888 3443 57888 5899999999999
Q ss_pred HhcCC--CCEEEEcCCCCcch--HHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHH
Q 014936 119 LLSRP--GANILLPRPGFPIY--ELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQH 194 (415)
Q Consensus 119 ~l~~~--gd~vi~~~p~y~~~--~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~ 194 (415)
.+..+ ||+|++...++.+. ...++..|..+..++.+ .++..+++.++..+++++++|.+++..|.||++.|.
T Consensus 96 ~l~~~~~Gd~v~~~~~g~~~~~~~~~a~~~G~~~~~~~~~--~~~~~~~~~~~~~i~~~t~lV~~~h~et~tG~~~pi-- 171 (377)
T 3e77_A 96 NLIGLKAGRCADYVVTGAWSAKAAEEAKKFGTINIVHPKL--GSYTKIPDPSTWNLNPDASYVYYCANETVHGVEFDF-- 171 (377)
T ss_dssp HHGGGSTTCEEEECCCSHHHHHHHHHHTTTSEEEECSCCC--SSSCSCCCGGGCCCCTTCSCEEEESEETTTTEECSS--
T ss_pred hccCCCCCCeEEEEECCHHHHHHHHHHHHhCCceEEeccC--CCcCCCCChHHhccCCCccEEEEeCccCchheEchh--
Confidence 99865 89988776666543 34566778777766653 334567788888888899999999988999999886
Q ss_pred HHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCC---ChHHH
Q 014936 195 LQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMF---RKPKV 271 (415)
Q Consensus 195 l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~---~~~~~ 271 (415)
+|+++|+++++|.+++. +..+..+..++ +++.|.+|++|.+| +|+++.++..... ..|.+
T Consensus 172 ------i~~~~~~~~~vD~~q~~----g~~~id~~~~~-----~~~~s~~K~~gp~G--~g~l~~~~~~l~~~~~~~p~~ 234 (377)
T 3e77_A 172 ------IPDVKGAVLVCDMSSNF----LSKPVDVSKFG-----VIFAGAQKNVGSAG--VTVVIVRDDLLGFALRECPSV 234 (377)
T ss_dssp ------CCCCTTCCEEEECTTTT----TSSCCCGGGCS-----EEEEEGGGTTSCTT--CEEEEEETTSCSCCCTTSCGG
T ss_pred ------hhccCCCEEEEEccccc----CCCCCchhhcC-----EEEEecccccCCCc--cEEEEEcHHHHhhccCCCCch
Confidence 36789999999999997 33444444443 45678899998788 7888887543100 00112
Q ss_pred HH--HHHhhccccCCchhHHHHHHHHhhCCCcHH-HHHHHHHHHHHHHHHHHHHhhcCCCCcCCC-CC--CCceEEEEec
Q 014936 272 VE--RMKKYFDILGDPATFIQAAVPSILQQPDEV-FFKKTLNLLKQSVDICYNKIKEIPCISCPH-KP--EGSMAVMLKL 345 (415)
Q Consensus 272 ~~--~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~-~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~-~p--~~g~~~~~~l 345 (415)
.+ .........++++.....++.++|+...+. .++...++.+++.+++.+.|+++|++.... .+ ..+..+.+.+
T Consensus 235 ~~~~~~~~~~~~~~Tp~v~~i~~l~~al~~l~~~GG~~~i~~~~~~l~~~l~~~L~~~~g~~~~~~~~~~rs~~ivsf~~ 314 (377)
T 3e77_A 235 LEYKVQAGNSSLYNTPPCFSIYVMGLVLEWIKNNGGAAAMEKLSSIKSQTIYEIIDNSQGFYVCPVEPQNRSKMNIPFRI 314 (377)
T ss_dssp GCHHHHHTTTTCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHTSTTSEECCSCGGGBCSSEEEEEE
T ss_pred hhHHHHhhcCCCCCCchHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhcCCceecCCCHHHcCCcEEEEEc
Confidence 11 111111223567777777777777643334 588899999999999999999998876211 11 1233455555
Q ss_pred CccccCCCCC-HHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEee--CChhhHHHHHHHHHHHHHHH
Q 014936 346 NLSLLDDIID-DIDFCFKLAKEESVIILPGTAVGLKNWLRVTFA--VDPYSLEECLDRIKSFYQRH 408 (415)
Q Consensus 346 ~~~~~~~~~~-~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~--~~~~~l~~~l~~l~~~~~~~ 408 (415)
+.... -.+ +..++..+ .++||.+.+|.. ..+.+|+|+. +++++++.+++.|+++.++.
T Consensus 315 ~~~~~--~~~~~~~~l~~l-~~~Gi~~~~g~~--~~g~iRiS~~~~~t~edId~l~~al~~~~~~~ 375 (377)
T 3e77_A 315 GNAKG--DDALEKRFLDKA-LELNMLSLKGHR--SVGGIRASLYNAVTIEDVQKLAAFMKKFLEMH 375 (377)
T ss_dssp SSTTC--CHHHHHHHHHHH-HHTTEESCBCCT--TTCSEEEECCTTSCHHHHHHHHHHHHHHHHHH
T ss_pred CCCCC--chhHHHHHHHHH-HHCCcEEeCCCC--cCCEEEEECCCCCCHHHHHHHHHHHHHHHHHc
Confidence 53100 000 13455554 467999988753 3467999994 68999999999999988763
No 226
>3qm2_A Phosphoserine aminotransferase; structural genomics, center for structural genomics of infec diseases, csgid; 2.25A {Salmonella enterica subsp} PDB: 1bjn_A* 1bjo_A* 3qbo_A*
Probab=99.90 E-value=2.3e-22 Score=187.33 Aligned_cols=323 Identities=13% Similarity=0.034 Sum_probs=210.3
Q ss_pred CCCcHHHHHHHHHHHhcC----C----C-C-CCCCCCCcHHHHHHHHHHHhhhCCCCCCC-CcEEE-eCChHHHHHHHHH
Q 014936 51 FHTTHVATEAVAEALLSE----K----F-N-GYAPTAGLPLTRRAIAEYLSRDLPYKLTP-NDVFV-TSGCTQAIDVAMA 118 (415)
Q Consensus 51 ~~~~~~~~~a~~~~~~~~----~----~-~-~y~~~~g~~~lr~~ia~~~~~~~~~~~~~-~~i~i-~~g~~~al~~~~~ 118 (415)
.+.+++|++++.+.+... . . . ......-+.+.|+.+++++ +++. ++|++ |+|+|+++++++.
T Consensus 36 t~~p~~V~~a~~~~~~~~~~n~~s~~~~~h~~~~~~~~~~~ar~~la~ll------~~~~~~evif~t~~~T~a~n~ai~ 109 (386)
T 3qm2_A 36 AMLPAEVLKLAQQELCDWHGLGTSVMEISHRGKEFIQVAEEAEQDFRDLL------NIPSNYKVLFCHGGGRGQFAGVPL 109 (386)
T ss_dssp CCCCHHHHHHHTCC-----------------------CCHHHHHHHHHHH------TCCTTEEEEEEESCTTHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHhccccCccccccCCCCHHHHHHHHHHHHHHHHHh------CCCCCceEEEEcCCchHHHHHHHH
Confidence 567899999987765321 0 0 0 0111346789999999999 3443 46887 6999999999999
Q ss_pred HhcCCCCEEEEcCCCCcc--hHHHHHhCCCeEEEeecc-CCCCCCCChhHHHhhcCCCceEEEecCCCCccccC-CCHHH
Q 014936 119 LLSRPGANILLPRPGFPI--YELSAAFRHIEVRHFDLL-PDKGWEVDLDDIESLADQNTVALVIINPGNPCGNV-YSYQH 194 (415)
Q Consensus 119 ~l~~~gd~vi~~~p~y~~--~~~~~~~~g~~~~~~~~~-~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~-~~~~~ 194 (415)
.+.++||+|++..-++.+ +...++..| ++..++.+ +.++..++++.++.++++++++|.+++..|.||+. .|.++
T Consensus 110 ~l~~~gd~v~~~~~~~~~~~~~~~a~~~G-~v~~v~~~~~~~G~~~~~~~~~~~l~~~t~lV~~~h~et~tG~~i~pi~~ 188 (386)
T 3qm2_A 110 NLLGDKTTADYVDAGYWAASAIKEAKKYC-APQIIDAKITVDGKRAVKPMREWQLSDNAAYLHYCPNETIDGIAIDETPD 188 (386)
T ss_dssp HHCTTCCEEEEEESSHHHHHHHHHHTTTS-EEEEEECEEEETTEEEECCGGGCCCCTTCSCEEECSEETTTTEECCCCCC
T ss_pred hccCCCCeEEEEeCCHHHHHHHHHHHHhC-CeEEEecCcccCCCCCCchHHHhhcCCCCcEEEEECCcCCcCEecCchhh
Confidence 999999998755444443 334556778 88888875 12332367888888898999999999988999996 55444
Q ss_pred HHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCC---ChHHH
Q 014936 195 LQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMF---RKPKV 271 (415)
Q Consensus 195 l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~---~~~~~ 271 (415)
+ . +|+++++|.+++. +..+..+..++ +.+.|.+|++|.+| +|++++++..... ..|.+
T Consensus 189 i---~-----~g~~~~vDa~qs~----g~~pidv~~~~-----~~~~s~hK~lGP~G--~g~l~v~~~~~~~~~~~~p~~ 249 (386)
T 3qm2_A 189 F---G-----PEVVVTADFSSTI----LSAPLDVSRYG-----VIYAGAQKNIGPAG--LTLVIVREDLLGKAHESCPSI 249 (386)
T ss_dssp C---C-----TTCCEEEECTTTT----TSSCCCGGGCS-----EEEEETTTTTCCTT--EEEEEEEGGGCSCCCTTSCGG
T ss_pred h---c-----CCCEEEEEccccc----CCCCCCccccC-----EEEEecccccCCCc--cEEEEECHHHHhhhcccCCcH
Confidence 4 2 6999999999987 44444454443 45578899998777 8988887543100 00111
Q ss_pred H--HHHHhhccccCCchhHHHHHHHHhhCCCcHH-HHHHHHHHHHHHHHHHHHHhhcCCCC-cCCCCC--CCceEEEEec
Q 014936 272 V--ERMKKYFDILGDPATFIQAAVPSILQQPDEV-FFKKTLNLLKQSVDICYNKIKEIPCI-SCPHKP--EGSMAVMLKL 345 (415)
Q Consensus 272 ~--~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~-~~~~~~~~~~~~~~~l~~~l~~~~~~-~~~~~p--~~g~~~~~~l 345 (415)
. ...........+++.....++.++++...+. .++...++.+++++++.+.|+++ ++ .....+ .....+.+.+
T Consensus 250 ~~~~~~~~~~~~~gTp~v~~i~~l~~Al~~~~~~gG~~~i~~~~~~l~~~l~~~l~~~-~~~~~~~~~~~rs~~iv~f~~ 328 (386)
T 3qm2_A 250 LDYTVLNDNDSMFNTPPTFAWYLSGLVFKWLKAQGGVAAMHKINQQKAELLYGVIDNS-DFYRNDVAQANRSRMNVPFQL 328 (386)
T ss_dssp GCHHHHHHC-------CCSHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTC-SSEECCBCGGGBCSSEEEEEE
T ss_pred HHHHHHhhcCCCCCCCcHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHC-CCcccCCCHHHcCceEEEEEC
Confidence 1 1111111123455666666666666543334 58888899999999999999988 54 211112 1223455556
Q ss_pred CccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEee--CChhhHHHHHHHHHHHHHHH
Q 014936 346 NLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFA--VDPYSLEECLDRIKSFYQRH 408 (415)
Q Consensus 346 ~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~--~~~~~l~~~l~~l~~~~~~~ 408 (415)
+... .+.++... |.++||.+.+|..+ .+.+|+|+. +++++++.+++.|+++.++.
T Consensus 329 ~~~~-----~~~~~~~~-L~~~gI~~~~g~~~--~~~iRiS~~~~~t~edId~l~~~l~~~~~~~ 385 (386)
T 3qm2_A 329 ADNT-----LDKVFLEE-SFAAGLHALKGHRV--VGGMRASIYNAMPIEGVKALTDFMIDFERRH 385 (386)
T ss_dssp SSGG-----GHHHHHHH-HHHTTEECCBCCTT--TCSEEEECCTTSCHHHHHHHHHHHHHHHHHH
T ss_pred CCcc-----ccHHHHHH-HHHCCCEEeCCCCC--cCeEEEEcCCCCCHHHHHHHHHHHHHHHHhc
Confidence 5311 13455555 57789998887654 256999994 58999999999999988753
No 227
>3m5u_A Phosphoserine aminotransferase; alpha-beta half sandwich, csgid, amino-acid biosynthesis, cytoplasm, pyridoxal phosphate; HET: MES; 2.15A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=99.90 E-value=5.7e-22 Score=183.04 Aligned_cols=324 Identities=15% Similarity=0.101 Sum_probs=214.6
Q ss_pred CcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCC---CC--CC-----CCCcHHHHHHHHHHHhhhCCCCCC-CCc
Q 014936 34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFN---GY--AP-----TAGLPLTRRAIAEYLSRDLPYKLT-PND 102 (415)
Q Consensus 34 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~---~y--~~-----~~g~~~lr~~ia~~~~~~~~~~~~-~~~ 102 (415)
..++++|..|. .+.+++|++++.+.+.....+ .| .. ..-+.+.|+.+++++ +++ +++
T Consensus 3 ~~~~~~f~pgp------t~~~~~V~~a~~~~~~~~~~~~~s~~~~~hr~~~~~~~~~~~r~~la~ll------~~~~~~~ 70 (361)
T 3m5u_A 3 AMRKINFSAGP------STLPLEILEQAQKELCDYQGRGYSIMEISHRTKVFEEVHFGAQEKAKKLY------ELNDDYE 70 (361)
T ss_dssp -CCCEECCSSS------CCCCHHHHHHHHHTSSSGGGSSSCGGGSCSSSHHHHHHHHHHHHHHHHHH------TCCTTEE
T ss_pred ccceEeecCCC------CCCcHHHHHHHHHHHHhcccCCceeeccCCCCHHHHHHHHHHHHHHHHHh------CCCCCce
Confidence 45678888885 567899999999876521100 00 00 123567788888888 344 457
Q ss_pred EEE-eCChHHHHHHHHHHhcCCCCEEE-EcCCCCc-chHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEe
Q 014936 103 VFV-TSGCTQAIDVAMALLSRPGANIL-LPRPGFP-IYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVI 179 (415)
Q Consensus 103 i~i-~~g~~~al~~~~~~l~~~gd~vi-~~~p~y~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i 179 (415)
|++ |+|+|+++++++..+. +||++. +....|. .+...++..|+++..++.+.+..+.++++. + +++++++|.+
T Consensus 71 v~f~t~~~T~a~n~~~~~~~-~~~~~~~i~~~~~~~~~~~~a~~~G~~v~~~~~~~~g~~~~~~~~-~--l~~~t~lv~~ 146 (361)
T 3m5u_A 71 VLFLQGGASLQFAMIPMNLA-LNGVCEYANTGVWTKKAIKEAQILGVNVKTVASSEESNFDHIPRV-E--FSDNADYAYI 146 (361)
T ss_dssp EEEESSHHHHHHHHHHHHHC-CSSCEEEEECSHHHHHHHHHHHHTTCCEEEEEECTTTTSCSCCCC-C--CCTTSSEEEE
T ss_pred EEEEcCcHHHHHHHHHHhcC-CCCeEEEEeCCHHHHHHHHHHHHcCCceEEEecccCcCCCcCChh-h--cCCCCCEEEE
Confidence 887 9999999999999998 788652 2222222 234456778999999988654322245565 3 7888999999
Q ss_pred cCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEe
Q 014936 180 INPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVT 259 (415)
Q Consensus 180 ~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~ 259 (415)
++..|.||.+.+. +++ +|+++++|.+++.. ..+..+..++ +++.|.+|++|.+| +|+++.
T Consensus 147 ~~~e~~tG~~~~~--------i~~-~~~~~~vD~~q~~g----~~~id~~~~d-----~~~~s~~K~~gp~G--~g~l~~ 206 (361)
T 3m5u_A 147 CSNNTIYGTQYQN--------YPK-TKTPLIVDASSDFF----SRKVDFSNIA-----LFYGGVQKNAGISG--LSCIFI 206 (361)
T ss_dssp ESEETTTTEECSS--------CCC-CSSCEEEECGGGTT----SSCCCCTTEE-----EEEEETTTTSSCTT--CEEEEE
T ss_pred eCCCCCcceeCCc--------ccc-cCCEEEEEcccccC----CCCCCcccCC-----EEEEechhccCCCc--cEEEEE
Confidence 9888999998762 233 49999999999873 3333333321 66778999998777 788888
Q ss_pred eCCCCCCChHHHHHHHHh--------------hccccCCchhHHHHHHHHhhCCCcHH-HHHHHHHHHHHHHHHHHHHhh
Q 014936 260 TDPCGMFRKPKVVERMKK--------------YFDILGDPATFIQAAVPSILQQPDEV-FFKKTLNLLKQSVDICYNKIK 324 (415)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~a~~~~l~~~~~~-~~~~~~~~~~~~~~~l~~~l~ 324 (415)
++ ++.+.+.. .....++++.....++.++++...+. .++...++.+++++++.+.|+
T Consensus 207 ~~--------~~~~~~~~~~~p~~~~~~~~~~~~~~~~Tp~v~~i~~l~~al~~l~~~gG~~~i~~~~~~l~~~l~~~L~ 278 (361)
T 3m5u_A 207 RK--------DMLERSKNKQIPSMLNYLTHAENQSLFNTPPTFAIYMFNLEMDWLLNQGGLDKVHEKNSQKATMLYECID 278 (361)
T ss_dssp EH--------HHHHHHHTCCCCGGGCHHHHHHTTTCSSCCCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHH
T ss_pred cH--------HHHhhhcCCCCCceeehHHHhhcCCCCCCccHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHH
Confidence 65 34433321 11123466666666666666532223 478888999999999999999
Q ss_pred cCCCC-cCCCCCC--CceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEee--CChhhHHHHHH
Q 014936 325 EIPCI-SCPHKPE--GSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFA--VDPYSLEECLD 399 (415)
Q Consensus 325 ~~~~~-~~~~~p~--~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~--~~~~~l~~~l~ 399 (415)
+++++ ..+..+. ....+.+.++.. .+ -+.++. ..|.++||.+.+|... .+.+|+|+. ++++|++.+++
T Consensus 279 ~~~g~~~~~~~~~~rs~~ivsf~~~~~--~~--~~~~~~-~~L~~~gI~~~~g~~~--~g~iRiS~~~~~t~edId~l~~ 351 (361)
T 3m5u_A 279 LSNGFYKGHADKKDRSLMNVSFNIAKN--KD--LEPLFV-KEAEEAGMIGLKGHRI--LGGIRASIYNALNLDQVKTLCE 351 (361)
T ss_dssp TSTTSEEESSCGGGBCSSEEEEEESSC--TT--HHHHHH-HHHHHTTEECCBCCTT--TCSEEEECCTTSCHHHHHHHHH
T ss_pred HCCCeeeccCCHHHcCCeEEEEECCCc--hh--hhHHHH-HHHHHCCCEEecCCCc--cCeEEEEccCCCCHHHHHHHHH
Confidence 99766 4222221 223455555420 00 123455 4457789999877542 256999994 58999999999
Q ss_pred HHHHHHHHH
Q 014936 400 RIKSFYQRH 408 (415)
Q Consensus 400 ~l~~~~~~~ 408 (415)
.|+++.+++
T Consensus 352 al~~~~~~~ 360 (361)
T 3m5u_A 352 FMKEFQGKY 360 (361)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHhc
Confidence 999988753
No 228
>2vyc_A Biodegradative arginine decarboxylase; pyridoxal phosphate, PLP-dependent E lyase, acid resistance; HET: LLP; 2.4A {Escherichia coli}
Probab=99.89 E-value=1.3e-21 Score=197.55 Aligned_cols=310 Identities=10% Similarity=-0.009 Sum_probs=196.7
Q ss_pred CcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCC
Q 014936 78 GLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDK 157 (415)
Q Consensus 78 g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~ 157 (415)
-..++++.++++++ . .+.+++++|+++++.+++.+++++||+|+++.|+|.++...+...|++++.++.+..
T Consensus 206 ~v~~~ee~la~l~G------~-d~~i~~~~Gtt~a~~~~i~al~~~GD~Vlv~~~~h~s~~~~~~~~G~~~v~v~~~~~- 277 (755)
T 2vyc_A 206 AFGESEKYAARVFG------A-DRSWSVVVGTSGSNRTIMQACMTDNDVVVVDRNCHKSIEQGLMLTGAKPVYMVPSRN- 277 (755)
T ss_dssp HHHHHHHHHHHHHT------C-SEEEEESSHHHHHHHHHHHHHCCTTCEEEEESSCCHHHHHHHHHHCCEEEEECCCBC-
T ss_pred HHHHHHHHHHHHhC------C-CceEEECCcHHHHHHHHHHHhcCCCCEEEECCCchHHHHHHHHHcCCEEEEEeCCCC-
Confidence 35778888888873 2 356788999999999999999999999999999999999989999999998886532
Q ss_pred CCC----C-----ChhHHHhhcCC--Cce--------EEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCc
Q 014936 158 GWE----V-----DLDDIESLADQ--NTV--------ALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHL 218 (415)
Q Consensus 158 ~~~----~-----~~~~l~~~~~~--~~~--------~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~ 218 (415)
+++ + |++.|++++++ +++ ++++++| ||+|.+. ++++|+++|+++|+++++|++|+.+
T Consensus 278 ~~g~~g~i~~~~~d~e~le~~i~~~~~~k~~~~~~~klvil~~p-n~~G~v~---dl~~I~~ia~~~~~~livDeA~~~~ 353 (755)
T 2vyc_A 278 RYGIIGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNC-TYDGVCY---NAKEAQDLLEKTSDRLHFDEAWYGY 353 (755)
T ss_dssp TTSCBCCCCGGGGSHHHHHHHHHHCTTTGGGTTCCCSCEEEESS-CTTSEEE---CHHHHHHHHTTTCSEEEEECTTCTT
T ss_pred ccccccccCcCCCCHHHHHHHHHhCccccccccCCCeEEEEECC-CCCceec---CHHHHHHHHHHcCCEEEEECcCchh
Confidence 232 4 89999998854 343 8899998 7999995 5788899999999999999999754
Q ss_pred c-cCCC--Ccccccc--cC-CCCCeEEEccCccccCCCCce-EEEEEeeCCCCCCChHHHHHHHHhhccccCCchhHHHH
Q 014936 219 V-FGDK--PFVPMGV--FG-STVPILTLGSLSKRWIVPGWR-LGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQA 291 (415)
Q Consensus 219 ~-~~~~--~~~~~~~--~~-~~~~~i~~~s~sK~~~~~G~r-~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (415)
. +++. +..++.. .+ ...+++++.|+||++ +|++ .|++++++.........+.+.+.. ..+.+++.....
T Consensus 354 ~~~~~~~~~~~~~~g~~aD~~~~~~iv~~S~hK~L--~g~~~g~~i~~~~~~~~i~~~~~~~~~~~--~~s~sp~~~~ia 429 (755)
T 2vyc_A 354 ARFNPIYADHYAMRGEPGDHNGPTVFATHSTHKLL--NALSQASYIHVREGRGAINFSRFNQAYMM--HATTSPLYAICA 429 (755)
T ss_dssp GGGCGGGTTSSSSCSCCCCCSSBEEEEEEETTTSS--SCCTTCEEEEEECCBTCCCHHHHHHHHHH--TSCSSCCHHHHH
T ss_pred cccCcccCCcchhcCCcCCccCCCeEEEECccccc--cCcCCeeeeeecCcccccCHHHHHHHHHH--hCCCCHHHHHHH
Confidence 3 3321 1222211 12 234678999999984 4555 567777653111110112222211 113455555555
Q ss_pred HHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCC---------CcCCCCCC--------------------------
Q 014936 292 AVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPC---------ISCPHKPE-------------------------- 336 (415)
Q Consensus 292 a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~---------~~~~~~p~-------------------------- 336 (415)
++..+++.......+++.+++.++.+.+++.|+++++ ++++ .|.
T Consensus 430 al~aA~~~l~~~gg~~~~~~~~~~a~~~r~~L~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 508 (755)
T 2vyc_A 430 SNDVAVSMMDGNSGLSLTQEVIDEAVDFRQAMARLYKEFTADGSWFFKPW-NKEVVTDPQTGKTYDFADAPTKLLTTVQD 508 (755)
T ss_dssp HHHHHHHHHSTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCEES-SCSEEECTTTCCEEEGGGSCHHHHHHCGG
T ss_pred HHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhccccccccccceeecc-Cchhccccccccccccccccchhccchhh
Confidence 4444433211122344555556666666666655433 3322 111
Q ss_pred -----------------Cc------eEEEEecCccccCC-----CCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEee
Q 014936 337 -----------------GS------MAVMLKLNLSLLDD-----IIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFA 388 (415)
Q Consensus 337 -----------------~g------~~~~~~l~~~~~~~-----~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~ 388 (415)
.+ .-+.+.++.....| ..+...+... |+++||.+.... .+.+|+.++
T Consensus 509 ~~~~~~~~~~h~~~~~~~~~~~~Dp~~v~i~~~~~~~~G~~~~~g~~~~~l~~~-L~~~gI~~e~~~----~~~v~~~~~ 583 (755)
T 2vyc_A 509 CWVMHPGESWHGFKDIPDNWSMLDPIKVSILAPGMGEDGELEETGVPAALVTAW-LGRHGIVPTRTT----DFQIMFLFS 583 (755)
T ss_dssp GTBCCTTCTTTCCTTCCTTSEEECTTEEEEECSCBCTTSSBCSSCCCHHHHHHH-HHTTTCCCSEEC----SSEEEEECC
T ss_pred hhccCcccccccccccCCCccccCCeEEEEEcCCCCCCCCccccCCcHHHHHHH-HHHCCCEEeecC----CCeEEEEEC
Confidence 11 12233333211111 1133555544 567899875432 578999994
Q ss_pred --CChhhHHHHHHHHHHHHHHHH
Q 014936 389 --VDPYSLEECLDRIKSFYQRHA 409 (415)
Q Consensus 389 --~~~~~l~~~l~~l~~~~~~~~ 409 (415)
.++++++.+++.|.++.+.+.
T Consensus 584 ~g~t~~~~~~l~~al~~~~~~~~ 606 (755)
T 2vyc_A 584 MGVTRGKWGTLVNTLCSFKRHYD 606 (755)
T ss_dssp TTCCTTTTHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHhhh
Confidence 688999999999998876653
No 229
>4ao9_A Beta-phenylalanine aminotransferase; HET: PLP; 1.50A {Variovorax paradoxus} PDB: 4aoa_A*
Probab=99.85 E-value=9.4e-20 Score=172.40 Aligned_cols=338 Identities=14% Similarity=0.082 Sum_probs=209.2
Q ss_pred ccCcceeEecccCCCCCCCCC-CcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChH
Q 014936 32 KNEKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCT 110 (415)
Q Consensus 32 ~~~~~~i~l~~g~~~~~~~~~-~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~ 110 (415)
.+|+.++|+..|.-... ++ .+|++.+|+.+++....... .+.....++.+.|++.+. ..+.++++++|+
T Consensus 84 ~dG~~ylD~~~g~~~~~--lGH~hp~v~~Av~~q~~~~~~~~-~~~~~~~~lae~l~~~~p-------~~~~v~f~~SGs 153 (454)
T 4ao9_A 84 ADGHRYADFIAEYTAGV--YGHSAPEIRDAVIEAMQGGINLT-GHNLLEGRLARLICERFP-------QIEQLRFTNSGT 153 (454)
T ss_dssp TTCCEEEESSGGGGTTT--TCSCCHHHHHHHHHHHHTCSCCC-SEESSHHHHHHHHHHHST-------TCSEEEEESSHH
T ss_pred CCCCEEEEccccHHhhc--ccCCCHHHHHHHHHHHhcCCCcc-CCcHHHHHHHHHHHHhCC-------CCCEEEEeCchH
Confidence 45888999977752211 22 57999999999988654322 223445677777777652 468999999999
Q ss_pred HHHHHHHHHhcC--CCCEEEEcCCCCcchHHHHHhC------CCeEEEeeccCCCCCCCChhHHHhhcCCC--ceEEEec
Q 014936 111 QAIDVAMALLSR--PGANILLPRPGFPIYELSAAFR------HIEVRHFDLLPDKGWEVDLDDIESLADQN--TVALVII 180 (415)
Q Consensus 111 ~al~~~~~~l~~--~gd~vi~~~p~y~~~~~~~~~~------g~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~~~v~i~ 180 (415)
+|++.+++.... .-++|+....+|++....+... ......+|. -|++.+++.++.. ..+.+|+
T Consensus 154 EA~e~AiklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~p~-------nd~~~l~~~l~~~~~~iAavIv 226 (454)
T 4ao9_A 154 EANLMALTAALHFTGRRKIVVFSGGYHGGVLGFGARPSPTTVPFDFLVLPY-------NDAQTARAQIERHGPEIAVVLV 226 (454)
T ss_dssp HHHHHHHHHHHHHHTCCEEEEETTCBCSTTCBBSSSBCTTSCCSEEEEECT-------TCHHHHHHHHHHTGGGEEEEEE
T ss_pred HHHHHHHHHHHhcccCCeEEEEeCCcCCccccccccccCccCCCCcccCCC-------chHHHHHHHHhhcCCceEEEEe
Confidence 999999988641 2268999999998744322111 112222221 3788888877542 3456677
Q ss_pred CC-CCccccC-CCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEE
Q 014936 181 NP-GNPCGNV-YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFV 258 (415)
Q Consensus 181 ~p-~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~ 258 (415)
.| .+..|.+ .+.+.+++|.++|++||+++|.||++.+ ..+.... ...++..+.++ +++|.+ ..|+.+|.++
T Consensus 227 EPv~g~~G~~~p~~~fL~~lr~lc~~~g~lLI~DEV~tG--R~G~~~a-~e~~gv~PDi~---t~gK~l-ggG~Piga~~ 299 (454)
T 4ao9_A 227 EPMQGASGCIPGQPDFLQALRESATQVGALLVFDEVMTS--RLAPHGL-ANKLGIRSDLT---TLGKYI-GGGMSFGAFG 299 (454)
T ss_dssp CSEESTTTCEECCHHHHHHHHHHHHHHTCEEEEECTTGG--GGSTTCH-HHHHTCCCSEE---EEEGGG-GTTSSCEEEE
T ss_pred ccccCCCCccCCchhhHHHHHHHHhhcCCEEEEECCCcC--CCccccc-hhccCCCCcEE---Eecccc-CCCCcceeee
Confidence 77 5556755 6788899999999999999999999974 2232211 12223222333 678995 5679999999
Q ss_pred eeCCCCCCChHHHHHHHHhh-----ccccCCchhHHHHHHHHhhCCCc-HHHHHHHHHHHHHHHHHHHHHhhcCCCCcCC
Q 014936 259 TTDPCGMFRKPKVVERMKKY-----FDILGDPATFIQAAVPSILQQPD-EVFFKKTLNLLKQSVDICYNKIKEIPCISCP 332 (415)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~a~~~~l~~~~-~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~ 332 (415)
+++ ++++.+... ...+++.+|++..++.+.|+... ++.+++..+.-...++.+.+.+++.+ +. .
T Consensus 300 ~~~--------ei~~~~~~~~~~~~h~~T~~gnPla~AAala~L~~l~~~~~~~~~~~~g~~l~~~L~~l~~~~~-~~-~ 369 (454)
T 4ao9_A 300 GRA--------DVMALFDPRTGPLAHSGTFNNNVMTMAAGYAGLTKLFTPEAAGALAERGEALRARLNALCANEG-VA-M 369 (454)
T ss_dssp ECH--------HHHGGGCTTTCSCCCCCTTTTCHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHT-BS-C
T ss_pred eHH--------HHHHHHhhccCCccccCCCCCCHHHHHHHHHHHHHHhccChhHHHHHHHHHHHHHHHHHHhhCC-CC-E
Confidence 865 677665432 12345678999988888876543 23333333333333333333333332 22 1
Q ss_pred CCCCCceEEEEecCccccCC---C--CC---HHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEeeCChhhHHHHHHHHHHH
Q 014936 333 HKPEGSMAVMLKLNLSLLDD---I--ID---DIDFCFKLAKEESVIILPGTAVGLKNWLRVTFAVDPYSLEECLDRIKSF 404 (415)
Q Consensus 333 ~~p~~g~~~~~~l~~~~~~~---~--~~---~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~~~l~~~l~~l~~~ 404 (415)
....-|.++-+.+......+ . .+ ...++..++ ++||.+.|. +.+.++..+++++|++++++|+++
T Consensus 370 ~vrg~G~m~gi~f~~~~~~~~~~~~~~d~~~~~~~~~~ll-~~Gv~~~p~------~~~~~s~~~T~~dId~~l~al~~~ 442 (454)
T 4ao9_A 370 QFTGIGSLMNAHFVQGDVRSSEDLAAVDGRLRQLLFFHLL-NEDIYSSPR------GFVVLSLPLTDADIDRYVAAIGSF 442 (454)
T ss_dssp EEEEETTEEEEESCCSCCCSGGGGTTCCHHHHHHHHHHHH-HTTEECCTT------CEEECCTTCCHHHHHHHHHHHHHH
T ss_pred EEeeeceEEEEEEecCCCCCHHHHHhhhHHHHHHHHHHHH-HCCEEEcCC------CCEEEeCCCCHHHHHHHHHHHHHH
Confidence 12233555555553211110 0 01 123444554 569998774 345566678999999999999999
Q ss_pred HHHHHH
Q 014936 405 YQRHAK 410 (415)
Q Consensus 405 ~~~~~~ 410 (415)
+.++..
T Consensus 443 l~~~~a 448 (454)
T 4ao9_A 443 IGGHGA 448 (454)
T ss_dssp HHHSGG
T ss_pred HHhccc
Confidence 987543
No 230
>3n75_A LDC, lysine decarboxylase, inducible; pyridoxal-5'-phosphate dependent decarboxylase, acid stress stringent response; HET: LLP G4P P6G; 2.00A {Escherichia coli} PDB: 3q16_A*
Probab=99.84 E-value=2.3e-19 Score=177.95 Aligned_cols=305 Identities=14% Similarity=0.071 Sum_probs=190.2
Q ss_pred CCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeecc
Q 014936 75 PTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLL 154 (415)
Q Consensus 75 ~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~ 154 (415)
+..-+.++++.+|++++ ..+.+++++|++.++.+++.+++++||.|+++.++|.++...+...|++++.++..
T Consensus 193 ~~g~i~eaE~~lA~~fG-------a~~a~~v~nGts~An~~ai~al~~pGD~VLv~r~~H~S~~~~l~lsGa~pv~v~~~ 265 (715)
T 3n75_A 193 HSGPHKEAEQYIARVFN-------ADRSYMVTNGTSTANKIVGMYSAPAGSTILIDRNCHKSLTHLMMMSDVTPIYFRPT 265 (715)
T ss_dssp TBTHHHHHHHHHHHHHT-------CSEEEEESSHHHHHHHHHHHHHCCTTCEEEEESSCCHHHHHHHHHSCCEEEEECCC
T ss_pred CcHHHHHHHHHHHHHhC-------CCCceEECcHHHHHHHHHHHHhCCCCCEEEECCCccHHHHHHHHHcCCEEEEEecc
Confidence 33446799999999983 23456777888899999999999999999999999999999999999999998865
Q ss_pred CCCCCCC---------ChhHHHhhcCC--Cce---EEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcc-
Q 014936 155 PDKGWEV---------DLDDIESLADQ--NTV---ALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLV- 219 (415)
Q Consensus 155 ~~~~~~~---------~~~~l~~~~~~--~~~---~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~- 219 (415)
. +.+++ |++.|++++++ +++ ++++++| |++|.+++ +++|+++|+.++ +++||+|+.+.
T Consensus 266 ~-~~~gi~~~i~~~~~d~e~Le~~l~~~~~~k~p~~vivt~p-n~~G~v~d---l~~I~ela~~~~--livDEAH~~~~~ 338 (715)
T 3n75_A 266 R-NAYGILGGIPQSEFQHATIAKRVKETPNATWPVHAVITNS-TYDGLLYN---TDFIKKTLDVKS--IHFDSAWVPYTN 338 (715)
T ss_dssp B-CTTCCBCCCCGGGGSHHHHHHHHHHSTTCCSCSEEEEESS-CTTSEEEC---HHHHHHHCCCSE--EEEECTTCTTGG
T ss_pred c-cccccccCcccccCCHHHHHHHHhhCcCccCceEEEEECC-CCCCccCC---HHHHHHHhCcCc--EEEccccccccc
Confidence 3 34443 89999998864 234 7999999 99999976 556666776653 79999998654
Q ss_pred cCCCCcccccccCC---CCC-eEEEccCccccCCCCc-eEEEEEeeCCCCCCChHHHHHHHHhhccccCCchhHHHHHHH
Q 014936 220 FGDKPFVPMGVFGS---TVP-ILTLGSLSKRWIVPGW-RLGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQAAVP 294 (415)
Q Consensus 220 ~~~~~~~~~~~~~~---~~~-~i~~~s~sK~~~~~G~-r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 294 (415)
+++... ....+.. .+. ++++.|+||+++ |+ ..|++++++.. . .+......... .+.+++++..+++.
T Consensus 339 f~~~~~-~~~al~~g~~aD~vii~~~S~hKtL~--gltqgs~i~v~~~i--~--~~~~~~~~~~~-~STSpsy~~~Asld 410 (715)
T 3n75_A 339 FSPIYE-GKCGMSGGRVEGKVIYETQSTHKLLA--AFSQASMIHVKGDV--N--EETFNEAYMMH-TTTSPHYGIVASTE 410 (715)
T ss_dssp GSGGGT-TSSTTSSSCCTTCEEEEEECHHHHSS--CCTTCEEEEEESCC--C--HHHHHHHHHHT-SCSSCCHHHHHHHH
T ss_pred cCCccc-cccccccCcCCCEEEEEEeccccccc--CCCCeeEEEeCchh--h--HHHHHHHHHhh-cCCCchHHHHHHHH
Confidence 332111 0111211 123 366999999954 33 25888887631 1 12222222222 24566666666666
Q ss_pred HhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCC------CcCCCCCC-----------------------CceE-----
Q 014936 295 SILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPC------ISCPHKPE-----------------------GSMA----- 340 (415)
Q Consensus 295 ~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~------~~~~~~p~-----------------------~g~~----- 340 (415)
.+++......-+++++++.++.+.+++.|+++++ +.++ .+. .+.+
T Consensus 411 aA~~~~~~~~g~~~~~~l~~~a~~~r~~L~~i~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~w~gf~~~~~~~~~~Dp~ 489 (715)
T 3n75_A 411 TAAAMMKGNAGKRLINGSIERAIKFRKEIKRLRTESDGWFFDVW-QPDHIDTTECWPLRSDSTWHGFKNIDNEHMYLDPI 489 (715)
T ss_dssp HHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSSCCCEES-SCSCCCSCSCEECCTTCCTTCCTTCCSSSEEECTT
T ss_pred HHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhhhcccceeecc-CcccccchhhhccCcccccccccccccCcccCCCe
Confidence 5553222123345667777777777777765432 2211 111 0111
Q ss_pred -EEEecCccccCC-----CCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEe--eCChhhHHHHHHHHHHHHHH
Q 014936 341 -VMLKLNLSLLDD-----IIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTF--AVDPYSLEECLDRIKSFYQR 407 (415)
Q Consensus 341 -~~~~l~~~~~~~-----~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~--~~~~~~l~~~l~~l~~~~~~ 407 (415)
+.+..+.....| ..++..+.. .|+++||.+.-.+. ..|-+-+ +.++++++.+++.|.++.+.
T Consensus 490 Kl~i~~~~~~~~G~~~~~Gi~g~~~~~-~L~~~~I~~E~~d~----~~vl~l~s~g~~~~~~~~L~~aL~~~~~~ 559 (715)
T 3n75_A 490 KVTLLTPGMEKDGTMSDFGIPASIVAK-YLDEHGIVVEKTGP----YNLLFLFSIGIDKTKALSLLRALTDFKRA 559 (715)
T ss_dssp EEEEECSCBCTTSCBCSSCCCHHHHHH-HHHHTTCCCSEEET----TEEEEECCTTCCHHHHHHHHHHHHHHHHH
T ss_pred EEEEEcCCCCCCCccccCCCcHHHHHH-HHHHCCCEEEecCC----CcEEEEeCCCCCHHHHHHHHHHHHHHHHH
Confidence 122222110001 113445444 45778998765432 3444433 56888888888888877654
No 231
>4atq_A 4-aminobutyrate transaminase; transferase; HET: PLP; 2.75A {Arthrobacter aurescens} PDB: 4atp_A*
Probab=99.84 E-value=7.4e-19 Score=167.06 Aligned_cols=350 Identities=15% Similarity=0.110 Sum_probs=212.3
Q ss_pred ccCcceeEecccCCCCCCCCC-CcHHHHHHHHHHHhcCCCCC--CCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCC
Q 014936 32 KNEKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLSEKFNG--YAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSG 108 (415)
Q Consensus 32 ~~~~~~i~l~~g~~~~~~~~~-~~~~~~~a~~~~~~~~~~~~--y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g 108 (415)
.+|+.++|+..|.-... ++ .+|++.+|+++++....+.. +.+.....+|.+.+++.. + .-..+.++++++
T Consensus 61 ~dG~~ylD~~~g~~~~~--lGh~~p~v~~Ai~~q~~~~~~~~~~~~~~~~~~~lae~L~~~~----p-~~~~~~v~f~~s 133 (456)
T 4atq_A 61 VDGNSFIDLGSGIAVTS--VGASDPAVVAAVQEAAAHFTHTCFMVTPYEGYVAVTEQLNRLT----P-GDHAKRTVLFNS 133 (456)
T ss_dssp TTSCEEEESSHHHHTCT--TCTTCHHHHHHHHHHHHHCSCCTTTTSCCHHHHHHHHHHHHHS----S-CSSCEEEEEESS
T ss_pred CCCCEEEEccccHHHHh--cCCCCHHHHHHHHHHHhhccCcccCccCcHHHHHHHHHHHHhC----C-CCCCcEEEEeCC
Confidence 45778899977742111 22 47999999999887533211 122222334555555554 1 112457999999
Q ss_pred hHHHHHHHHHHhc--CCCCEEEEcCCCCcchHHHHHhC-C-------------CeEEEeeccC----CCCCCCChhH---
Q 014936 109 CTQAIDVAMALLS--RPGANILLPRPGFPIYELSAAFR-H-------------IEVRHFDLLP----DKGWEVDLDD--- 165 (415)
Q Consensus 109 ~~~al~~~~~~l~--~~gd~vi~~~p~y~~~~~~~~~~-g-------------~~~~~~~~~~----~~~~~~~~~~--- 165 (415)
|++|++.+++... ..-.+|+....+|++....+... + ..+..+|... ......+.+.
T Consensus 134 GsEA~e~AlklAr~~t~r~~ii~~~~~yHG~t~~als~t~~~~~~~~~~~p~~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 213 (456)
T 4atq_A 134 GAEAVENAVKVARLATGRDAVVAFDHAYHGRTNLTMALTAKAMPYKTNFGPFAPEVYRMPMSYPFREENPEITGAEAAKR 213 (456)
T ss_dssp HHHHHHHHHHHHHHHHCCCEEEEETTCCCCSSHHHHHHCCCCTTTTTTSCSCCSSEEEECCCCGGGCSSTTCCHHHHHHH
T ss_pred hHHHHHHHHHHHhhhhcCCeEEEEecccCCccccccccccCccccccCCCCccccceecccccccccCCCcccHHHHHHH
Confidence 9999999998764 12368999999999866544321 1 1233333211 0001112222
Q ss_pred ----HHhhcCCCceEEEecCC-CCccccC-CCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEE
Q 014936 166 ----IESLADQNTVALVIINP-GNPCGNV-YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILT 239 (415)
Q Consensus 166 ----l~~~~~~~~~~v~i~~p-~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~ 239 (415)
+++.+.....+.+|..| +...|.+ .+.+.+++|.++|++||+++|.||++.++...|... ....++..+.++
T Consensus 214 ~~~~~e~~~~~~~iAAvivEPiqg~gG~~~p~~~fl~~lr~lc~~~gillI~DEV~tG~GRtG~~~-a~e~~gv~PDiv- 291 (456)
T 4atq_A 214 AITMIEKQIGGDQVAAIIIEPIQGEGGFIVPAEGFLPALSEWAKEKGIVFIADEVQSGFCRTGEWF-AVDHEGVVPDII- 291 (456)
T ss_dssp HHHHHHHHTCGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSS-GGGGTTCCCSEE-
T ss_pred HHHHHHHhhcCCceEEEEeccccCCCCccccchhhhHHHHHHHhhcCCceEecccccccCCccccc-cccccCCCCchh-
Confidence 33333445667778888 4556655 678899999999999999999999999977666532 223333333333
Q ss_pred EccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhh-ccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHH
Q 014936 240 LGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKY-FDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDI 318 (415)
Q Consensus 240 ~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~ 318 (415)
+++|. ...|+.+|.+++++ ++.+.+... ...+++.++++.+++.+.|+...++ +..++.++.-++
T Consensus 292 --t~gK~-lggg~P~~av~~~~--------~i~~~~~~~~~~~Tf~gnpla~aaala~L~~i~~~---~l~~~~~~~g~~ 357 (456)
T 4atq_A 292 --TMAKG-IAGGLPLSAITGRA--------DLLDAVHPGGLGGTYGGNPVACAAALAAIDTMEQH---DLNGRARHIEEL 357 (456)
T ss_dssp --EECGG-GGTTSSCEEEEEEH--------HHHTTSCTTSSCCSSSSCHHHHHHHHHHHHHHHHT---THHHHHHHHHHH
T ss_pred --hhhhc-ccCcCCceeeEecH--------HHHhcccccCCCCCCCCChHHHHhhHHHHHHHhhc---cHHHHHHHHHHH
Confidence 56899 46889999999875 566665544 2346788999999999888653222 233344444444
Q ss_pred HHHHhhc----CCC--CcCCC-CCCCceEEEEecCccccCC--CCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEe--
Q 014936 319 CYNKIKE----IPC--ISCPH-KPEGSMAVMLKLNLSLLDD--IIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTF-- 387 (415)
Q Consensus 319 l~~~l~~----~~~--~~~~~-~p~~g~~~~~~l~~~~~~~--~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~-- 387 (415)
+.+.|++ ++. ...+. ...-|+++-+++....... ......+...+ .++|+.+.++... .+.|||..
T Consensus 358 l~~~L~~l~~~~~~~~~~~v~~VRG~Gl~~giel~~~~~~~~~~~~~~~v~~~~-~~~Gvl~~~~g~~--~~~irl~PpL 434 (456)
T 4atq_A 358 ALGKLRELAAELSAGGGSVVGDIRGRGAMLAIELVQPGSKEPNAELTKAVAAAC-LKEGVIILTCGTY--GNVIRLLPPL 434 (456)
T ss_dssp HHHHHHHHHHHCC-----CEEEEEEETTEEEEEEBCTTSCCBCHHHHHHHHHHH-HHTTEECEEECTT--SCEEEECCCT
T ss_pred HHHHHHHHHHhcccccCCceEEeeecceEEEEEEecCCCCCcCHHHHHHHHHHH-HHCCCEEEecCCC--CCEEEEECCC
Confidence 4444433 321 11010 1234667777664321110 00123444444 5679998765432 36799988
Q ss_pred eCChhhHHHHHHHHHHHHHH
Q 014936 388 AVDPYSLEECLDRIKSFYQR 407 (415)
Q Consensus 388 ~~~~~~l~~~l~~l~~~~~~ 407 (415)
..+++++++++++|.++++.
T Consensus 435 ~it~~~id~~l~~l~~al~a 454 (456)
T 4atq_A 435 VISDELLIDGLEVLAAAIKA 454 (456)
T ss_dssp TCCHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHh
Confidence 46899999999999999875
No 232
>4e3q_A Pyruvate transaminase; aminotransferase, transferase; HET: PMP; 1.90A {Vibrio fluvialis} PDB: 4e3r_A* 3nui_A
Probab=99.83 E-value=1.3e-18 Score=165.91 Aligned_cols=353 Identities=13% Similarity=0.085 Sum_probs=215.9
Q ss_pred ccCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCC-cHHHHHHHHHHHhhhCCCCCCCCcEEEeCChH
Q 014936 32 KNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAG-LPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCT 110 (415)
Q Consensus 32 ~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g-~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~ 110 (415)
.+|+.++|+..|.-....+ -.+|++.+|+++++.... .|....+ ..+....+|+.+.+..+ .+-+.++++++|+
T Consensus 64 ~dG~~ylD~~~g~~~~~lG-h~~p~v~~Ai~~q~~~l~--~~~~~~~~~~~~~~~lAe~L~~~~p--~~~~~v~f~~sGs 138 (473)
T 4e3q_A 64 VNGRRYLDANSGLWNMVAG-FDHKGLIDAAKAQYERFP--GYHAFFGRMSDQTVMLSEKLVEVSP--FDSGRVFYTNSGS 138 (473)
T ss_dssp TTCCEEEETTTTTTTCTTC-SCCHHHHHHHHHHHHHCC--CCCCCTTEEEHHHHHHHHHHHHHSS--CSSCEEEEESSHH
T ss_pred CCCCEEEEcccCHHHhhcc-CCCHHHHHHHHHHHHhcc--cccccccccCHHHHHHHHHHHhhCC--CCccEEEEeCchH
Confidence 4578899998775322111 147999999999887532 1211111 12333344444443322 3456899999999
Q ss_pred HHHHHHHHHhc-------CCC-CEEEEcCCCCcchHHHHHhCCC------------eEEEeeccCC---CCCCCC-----
Q 014936 111 QAIDVAMALLS-------RPG-ANILLPRPGFPIYELSAAFRHI------------EVRHFDLLPD---KGWEVD----- 162 (415)
Q Consensus 111 ~al~~~~~~l~-------~~g-d~vi~~~p~y~~~~~~~~~~g~------------~~~~~~~~~~---~~~~~~----- 162 (415)
+|++.+++... +++ .+|+....+|++....+..... ....++.... ......
T Consensus 139 EA~e~AiKlAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~tg~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~ 218 (473)
T 4e3q_A 139 EANDTMVKMLWFLHAAEGKPQKRKILTRWNAYHGVTAVSASMTGKPYNSVFGLPLPGFVHLTCPHYWRYGEEGETEEQFV 218 (473)
T ss_dssp HHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHSCCGGGGGGTCSCTTEEEECCCCHHHHSCTTCCHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCCCCcceEEEeeceECCCccccccccccccccccCCCCCcccccCCCcccccccccchhhHHH
Confidence 99999998753 233 5788899999875544322211 1122221100 000011
Q ss_pred ---hhHHHhhcC---CCceEEEecCC-CCccccC-CCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCC
Q 014936 163 ---LDDIESLAD---QNTVALVIINP-GNPCGNV-YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGST 234 (415)
Q Consensus 163 ---~~~l~~~~~---~~~~~v~i~~p-~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~ 234 (415)
.+++++.+. +...+.++..| +...|++ .+.+.+++|.++|++||+++|.||++.++...|.... ...++..
T Consensus 219 ~~~~~~l~~~i~~~~~~~iAavi~EPiqg~gG~~~p~~~fl~~lr~lc~~~gilLI~DEV~tGfGRtG~~fa-~e~~gv~ 297 (473)
T 4e3q_A 219 ARLARELEETIQREGADTIAGFFAEPVMGAGGVIPPAKGYFQAILPILRKYDIPVISDEVICGFGRTGNTWG-CVTYDFT 297 (473)
T ss_dssp HHHHHHHHHHHHHHCGGGEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCCEEEECTTTSSSTTSSSCH-HHHTTCC
T ss_pred HHHHHHHHHHHHhhCCCceEEEEeCCccCCCCceeCCHHHHHHHHHHhcccceEEeccCccccCCcccchhH-HHhcCCC
Confidence 223344332 34567778888 5556765 6778999999999999999999999999876665332 2233333
Q ss_pred CCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhh--------ccccCCchhHHHHHHHHhhCCCcHHHHH
Q 014936 235 VPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKY--------FDILGDPATFIQAAVPSILQQPDEVFFK 306 (415)
Q Consensus 235 ~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~a~~~~l~~~~~~~~~ 306 (415)
+.++ +++|.++..++++|.+++++ ++.+.+... ...+++.+|++.+++.+.|+...+ +
T Consensus 298 PDi~---t~~K~l~gG~~Pl~av~~~~--------~i~~~~~~~~~~~~~~~hg~T~~Gnpla~Aaala~L~~i~~---~ 363 (473)
T 4e3q_A 298 PDAI---ISSKNLTAGFFPMGAVILGP--------ELSKRLETAIEAIEEFPHGFTASGHPVGCAIALKAIDVVMN---E 363 (473)
T ss_dssp CSEE---EECGGGGTTSSCCEEEEECH--------HHHHHHHHHHHHHSCCCCCCTTTTCHHHHHHHHHHHHHHHH---S
T ss_pred CChH---HhcccccCCCCCcccccccH--------HHHHHhccccccccccccCCCCCCCcchhhhhhhhhhhhcc---c
Confidence 3334 56899655559999999976 677766432 123567889999998888864322 2
Q ss_pred HHHHHHHHHHHHHHHHhhcC---CCCcCCCCCCCceEEEEecCccccC------CCCCHHHHHHHHHhhcCeEEEcCCCC
Q 014936 307 KTLNLLKQSVDICYNKIKEI---PCISCPHKPEGSMAVMLKLNLSLLD------DIIDDIDFCFKLAKEESVIILPGTAV 377 (415)
Q Consensus 307 ~~~~~~~~~~~~l~~~l~~~---~~~~~~~~p~~g~~~~~~l~~~~~~------~~~~~~~~~~~ll~~~gi~v~~g~~~ 377 (415)
...++.++.-+++.+.|+++ |.+.. ...-|+++-+++...+.. .......+... +.++|+.+.|..
T Consensus 364 ~l~~~~~~~g~~l~~~L~~l~~~~~v~~--vRG~Gl~~gielv~~~~~~~~~~~~~~~~~~~~~~-~~~~Gll~~~~g-- 438 (473)
T 4e3q_A 364 GLAENVRRLAPRFEERLKHIAERPNIGE--YRGIGFMWALEAVKDKASKTPFDGNLSVSERIANT-CTDLGLICRPLG-- 438 (473)
T ss_dssp SHHHHHHHHHHHHHHHHHHHTTSTTEEE--EEEETTEEEEEECSBTTTTBCCCGGGCHHHHHHHH-HHHTTEECEEET--
T ss_pred cHHHHHHHHHHHHHHHHHHHhcCCCeeE--EeecceEEEEEEecCccccccccccHHHHHHHHHH-HHHCCcEEEecC--
Confidence 33445555555566665543 44331 233466666655321110 01112344444 466799998753
Q ss_pred CCCCeEEEEe--eCChhhHHHHHHHHHHHHHHHHHHh
Q 014936 378 GLKNWLRVTF--AVDPYSLEECLDRIKSFYQRHAKQL 412 (415)
Q Consensus 378 ~~~~~iRi~~--~~~~~~l~~~l~~l~~~~~~~~~~~ 412 (415)
+.+|+.. ..+++++++++++|.+++++..+++
T Consensus 439 ---~~i~l~PPL~it~~eid~~~~~l~~al~~v~ael 472 (473)
T 4e3q_A 439 ---QSVVLCPPFILTEAQMDEMFDKLEKALDKVFAEV 472 (473)
T ss_dssp ---TEEEECCCTTCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ---CEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHHHh
Confidence 6789887 4689999999999999999987765
No 233
>3hl2_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine, sepsecs, protein-RNA complex, alternative splicing, cytoplasm, protein biosynthesis, pyridoxal phosphate, selenium; HET: PLR SEP; 2.81A {Homo sapiens}
Probab=99.77 E-value=3.7e-17 Score=150.81 Aligned_cols=307 Identities=14% Similarity=0.093 Sum_probs=192.7
Q ss_pred HHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCC----CCEEEEcCCCCcchHHHHHhCCCeEEEeeccC-CCCCCC
Q 014936 87 AEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRP----GANILLPRPGFPIYELSAAFRHIEVRHFDLLP-DKGWEV 161 (415)
Q Consensus 87 a~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~----gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~-~~~~~~ 161 (415)
.+|+. ..|++ .....++++|+|.++.+++.+.+++ ||.|+++..+|.+...++...|+++++++... ++...+
T Consensus 123 ld~L~-~~G~~-~~~~~flVnGsTgg~lamilaa~r~~rpg~d~VIvpRn~HKSv~kAliL~Gl~Pv~V~p~~d~~~~~i 200 (501)
T 3hl2_A 123 LDIIK-LAGVH-TVANCFVVPMATGMSLTLCFLTLRHKRPKAKYIIWPRIDQKSCFKSMITAGFEPVVIENVLEGDELRT 200 (501)
T ss_dssp HHHHH-HTTCT-TCCEEEEESSCHHHHHHHHHHHHHHHCTTCCEEEEECCCCHHHHHHHHHTTCEEEEECEEEETTEEEE
T ss_pred HHHHH-HcCCC-CCCcEEEECcHHHHHHHHHHHHcCcccCCCCEEEEecchHHHHHHHHHHcCCeEEEEeeeecccccCC
Confidence 33443 34644 2346899999998877777777653 49999999999999999999999999886522 234678
Q ss_pred ChhHHHhhcCC---CceEEEecCC-CCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcc-cCCCCcccccccC-CCC
Q 014936 162 DLDDIESLADQ---NTVALVIINP-GNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLV-FGDKPFVPMGVFG-STV 235 (415)
Q Consensus 162 ~~~~l~~~~~~---~~~~v~i~~p-~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~-~~~~~~~~~~~~~-~~~ 235 (415)
|++.+++++++ ...++++++| .|..|.+ +++++|+++|++||+++++|++|+... +....+.....++ .+
T Consensus 201 d~e~le~aI~e~ga~~i~~V~~Ttt~y~p~~~---ddI~eIaeIch~~gIpllVDeAhGah~~~~~~lp~sA~~~GrAD- 276 (501)
T 3hl2_A 201 DLKAVEAKVQELGPDCILCIHSTTSCFAPRVP---DRLEELAVICANYDIPHIVNNAYGVQSSKCMHLIQQGARVGRID- 276 (501)
T ss_dssp CHHHHHHHHHHHCGGGEEEEEEECSCCTTBCC---CCHHHHHHHHHHHTCCEEEECTTCTTCHHHHHHHHHHHHHSCCC-
T ss_pred CHHHHHHHHHhcCCCcEEEEEecCCCCCCccc---ccHHHHHHHHHHcCCeEEEeCcchhhhhhhhhhHHHHHhcCCCc-
Confidence 99999998865 3345555544 4544455 689999999999999999999998744 1111111222233 22
Q ss_pred CeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhhccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHH
Q 014936 236 PILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQS 315 (415)
Q Consensus 236 ~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~ 315 (415)
+++.|.+|.+..+ +..|.+..++ +++.+++........+.++ +......++ +...+.+++..++..++
T Consensus 277 --~vVqS~HK~llvp-IGG~ii~~~d-------~e~l~~~~~~yPGr~S~Sp-sldl~~tLL-~lGr~Gy~~ll~e~~el 344 (501)
T 3hl2_A 277 --AFVQSLDKNFMVP-VGGAIIAGFN-------DSFIQEISKMYPGRASASP-SLDVLITLL-SLGSNGYKKLLKERKEM 344 (501)
T ss_dssp --EEEEEHHHHHCCC-SSCEEEEESC-------HHHHHHHHHTSCSCBCSHH-HHHHHHHHH-HHHHHHHHHHHHHHHHH
T ss_pred --EEEecccccceee-cCceEEEeCC-------HHHHHHHHHhCCCCCCCcH-HHHHHHHHH-HHHHHHHHHHHHHHHHH
Confidence 6778999997655 2223444443 3566666443311111222 221222222 23346678888888888
Q ss_pred HHHHHHHhhcCC---CCcCCCCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCe---EE-EcCC----------CCC
Q 014936 316 VDICYNKIKEIP---CISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESV---II-LPGT----------AVG 378 (415)
Q Consensus 316 ~~~l~~~l~~~~---~~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi---~v-~~g~----------~~~ 378 (415)
.+++.+.|+++. +-+....|....-+-+.+........ .....+-.+|...+| -| .+|. .|+
T Consensus 345 a~~L~~~L~~la~~~ge~ll~~~~n~is~a~tl~~~~~~~~-~~~t~~gs~Lf~r~vsG~Rvv~~~~~~~i~g~~f~~~g 423 (501)
T 3hl2_A 345 FSYLSNQIKKLSEAYNERLLHTPHNPISLAMTLKTLDEHRD-KAVTQLGSMLFTRQVSGARVVPLGSMQTVSGYTFRGFM 423 (501)
T ss_dssp HHHHHHHHHHHHHTTTCCBCCCTTCSSEEEEECTTSCTTTS-CHHHHHHHHHHHTTCCSCEEECTTCCEEETTEEESSTT
T ss_pred HHHHHHHHHHHHHhcChhhcCCCCCceeEEEeccccccccc-ccHHHHHHHHHhcCCCcceeecCCCceEECCeeecCcc
Confidence 888888888641 33323345555555555543211111 223344445555454 23 3444 333
Q ss_pred C------CCeEEEEe--eCChhhHHHHHHHHHHHHHHHHHHh
Q 014936 379 L------KNWLRVTF--AVDPYSLEECLDRIKSFYQRHAKQL 412 (415)
Q Consensus 379 ~------~~~iRi~~--~~~~~~l~~~l~~l~~~~~~~~~~~ 412 (415)
. ..|+-++. +.+++|++.++++|.+.+.++.++.
T Consensus 424 ~h~~~~~~~yl~~a~aiG~~~~~v~~~~~~l~~~~~~~~~~~ 465 (501)
T 3hl2_A 424 SHTNNYPCAYLNAASAIGMKMQDVDLFIKRLDRCLKAVRKER 465 (501)
T ss_dssp TTSSCCSSCEEEEECCTTCCHHHHHHHHHHHHHHHHHHHC--
T ss_pred cCCCCCCchHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhh
Confidence 2 35788877 5799999999999999999987764
No 234
>4a0g_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; BIO3-BIO1, biotin synthesis; HET: PLP; 2.50A {Arabidopsis thaliana} PDB: 4a0h_A* 4a0r_A* 4a0f_A*
Probab=99.76 E-value=2.3e-18 Score=174.98 Aligned_cols=344 Identities=13% Similarity=0.064 Sum_probs=204.0
Q ss_pred ceeEecccCCCCCCCCC-C-cHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCC-CCcEEEeCChHHH
Q 014936 36 KVISLAMGDPTVHSCFH-T-THVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLT-PNDVFVTSGCTQA 112 (415)
Q Consensus 36 ~~i~l~~g~~~~~~~~~-~-~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~-~~~i~i~~g~~~a 112 (415)
.++|+..|.-.. +++ . +|++.+|+++++..-.+..+.. ...+....+|+.+.+..+ -. .+.++++++|++|
T Consensus 381 ~ylD~~sg~~~~--~lGh~~~p~i~~Ai~~Q~~~l~h~~~~~--~~~~~~~~Lae~L~~~~p--~~~l~~vff~~SGSeA 454 (831)
T 4a0g_A 381 QQFDACASWWTQ--GPDPTFQAELAREMGYTAARFGHVMFPE--NVYEPALKCAELLLDGVG--KGWASRVYFSDNGSTA 454 (831)
T ss_dssp EEEETTHHHHTC--CCCHHHHHHHHHHHHHHHHHHSSCCCTT--EECHHHHHHHHHHHHTTT--TTTCCEEEEESSHHHH
T ss_pred heeeecccHhhc--CCCCCCCHHHHHHHHHHHhhcccccccc--cCCHHHHHHHHHHHHhCC--CCCCCEEEECCChhHH
Confidence 677887763111 133 3 7999999999877522211111 112333344555443222 12 4689999999999
Q ss_pred HHHHHHHhc-----CCC------------CEEEEcCCCCcchHHHHHh-CCCe---------------E-----------
Q 014936 113 IDVAMALLS-----RPG------------ANILLPRPGFPIYELSAAF-RHIE---------------V----------- 148 (415)
Q Consensus 113 l~~~~~~l~-----~~g------------d~vi~~~p~y~~~~~~~~~-~g~~---------------~----------- 148 (415)
++.+++... ..| .+||....+|++-...+.. .|.. +
T Consensus 455 ~E~AlK~A~r~~~~~~g~~~~~~~~~~~r~~iI~~~~syHG~T~gals~tg~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 534 (831)
T 4a0g_A 455 IEIALKMAFRKFCVDHNFCEATEEEKHIVVKVIALRGSYHGDTLGAMEAQAPSPYTGFLQQPWYTGRGLFLDPPTVFLSN 534 (831)
T ss_dssp HHHHHHHHHHHHHHTTTC---------CCEEEEEETTCCCCSSHHHHHTSCCCGGGSTTTCTTCCCCEEEECCCEEEEET
T ss_pred HHHHHHHHHHHHHhhcCCCccccccccCccEEEEecCCcccCceeeeeccCccccccccccccccCCccccCCccccccC
Confidence 999998862 222 2688888888865444332 2210 0
Q ss_pred --EEeeccCC------C--CCCCC------------------hhHHHhhcC-------CCceEEEecCC--CCccccC-C
Q 014936 149 --RHFDLLPD------K--GWEVD------------------LDDIESLAD-------QNTVALVIINP--GNPCGNV-Y 190 (415)
Q Consensus 149 --~~~~~~~~------~--~~~~~------------------~~~l~~~~~-------~~~~~v~i~~p--~nptG~~-~ 190 (415)
..++.... + .+ -+ .+.|++.++ ....+.++..| ++..|.. +
T Consensus 535 ~~~~~~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~~~~iaavi~Epvvqg~gG~~~~ 613 (831)
T 4a0g_A 535 GSWNISLPESFSEIAPEYGTF-TSRDEIFDKSRDASTLARIYSAYLSKHLQEHSGVRQSAHVGALIIEPVIHGAGGMHMV 613 (831)
T ss_dssp TEEEEECCTTSCCCCSSTTEE-SCHHHHHCGGGGGSHHHHHHHHHHHHHC---------CEEEEEEECCSEETTTTSEEE
T ss_pred CceEecCCccccccccccccc-cchhhhhcccccchhhhHHHHHHHHHHHHhhhhhcCCCcEEEEEEecccccCCCCccC
Confidence 01111100 0 00 01 256777664 23456677777 5777776 5
Q ss_pred CHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCC-ceEEEEEeeCCCCCCChH
Q 014936 191 SYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPG-WRLGWFVTTDPCGMFRKP 269 (415)
Q Consensus 191 ~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~ 269 (415)
|.+.+++|.++|++||+++|+||++.++...|... ....++..++++ +++|.++. | +++|++++++
T Consensus 614 ~~~~L~~l~~lc~~~gilLI~DEV~tGfGRtG~~f-a~e~~gv~PDii---tlsK~L~g-G~~Plgav~~~~-------- 680 (831)
T 4a0g_A 614 DPLFQRVLVNECRNRKIPVIFDEVFTGFWRLGVET-TTELLGCKPDIA---CFAKLLTG-GMVPLAVTLATD-------- 680 (831)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEECTTTTTTTTSBSS-THHHHSSCCSEE---EECGGGGT-TSSCCEEEEECH--------
T ss_pred CHHHHHHHHHHHHHcCCeEEEEcCccccccCCCch-hhHhcCCCCcEE---EEeccccc-CccCcEEEEECH--------
Confidence 88899999999999999999999999887666543 223333333333 68999655 6 8999999976
Q ss_pred HHHHHHHhh-------ccccCCchhHHHHHHHHhhCCCcH-HHHHHH---HHHHHH-HHHHHHHHhhcCCCCcCCCCCCC
Q 014936 270 KVVERMKKY-------FDILGDPATFIQAAVPSILQQPDE-VFFKKT---LNLLKQ-SVDICYNKIKEIPCISCPHKPEG 337 (415)
Q Consensus 270 ~~~~~~~~~-------~~~~~~~~~~~~~a~~~~l~~~~~-~~~~~~---~~~~~~-~~~~l~~~l~~~~~~~~~~~p~~ 337 (415)
++++.+... ...+++.++++++++.+.|+...+ +..++. .+++++ ..+.+.+.+.+.|.+. . ....
T Consensus 681 ~i~~~~~~~~~~~~~~hg~T~~g~Pla~Aaala~L~~i~~~~l~~~~~~~~~~l~~~l~~~l~~~l~~~~~v~-~-vrg~ 758 (831)
T 4a0g_A 681 AVFDSFSGDSKLKALLHGHSYSAHAMGCATAAKAIQWFKDPETNHNITSQGKTLRELWDEELVQQISSHSAVQ-R-VVVI 758 (831)
T ss_dssp HHHHTTCSSCGGGSCCCCCTTTTCHHHHHHHHHHHHHHHCTTTCTTBCTTSSBBCCCSCHHHHHHHHHSTTEE-E-EEEE
T ss_pred HHHHHHhcccccccceeecCCcccHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCce-e-Eeec
Confidence 677766432 123567789999888887753111 111111 111111 1123444555565554 2 2345
Q ss_pred ceEEEEecCccccC-C--CCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEe--eCChhhHHHHHHHHHHHHHH
Q 014936 338 SMAVMLKLNLSLLD-D--IIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTF--AVDPYSLEECLDRIKSFYQR 407 (415)
Q Consensus 338 g~~~~~~l~~~~~~-~--~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~--~~~~~~l~~~l~~l~~~~~~ 407 (415)
|.++.+.+...... . .....++...+ .++||.+.|+. +.||+++ .++++++++++++|.+++++
T Consensus 759 Gl~~~iel~~~~~~~~~~~~~a~~~~~~l-~e~Gv~v~p~g-----~~lrl~pp~~~t~e~id~~~~~l~~~l~~ 827 (831)
T 4a0g_A 759 GTLFALELKADASNSGYASLYAKSLLIML-REDGIFTRPLG-----NVIYLMCGPCTSPEICRRLLTKLYKRLGE 827 (831)
T ss_dssp TTEEEEEEC---------CHHHHHHHHHH-HHTTEECCCBT-----TEEEEECCTTCCHHHHHHHHHHHHHHHTT
T ss_pred ccEEEEEEecCccccccchHHHHHHHHHH-HHCCcEEEecC-----CEEEEECCCCCCHHHHHHHHHHHHHHHHH
Confidence 67777776431100 0 00123455554 56799998863 7899996 57899999999999988764
No 235
>3ou5_A Serine hydroxymethyltransferase, mitochondrial; structural genomics, STRU genomics consortium, SGC; 2.04A {Homo sapiens}
Probab=99.73 E-value=2.1e-15 Score=138.54 Aligned_cols=345 Identities=14% Similarity=0.061 Sum_probs=207.0
Q ss_pred ceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCC------CCCCcHHHHHHHHHHHhhhCCCCCCCC--cEEEeC
Q 014936 36 KVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYA------PTAGLPLTRRAIAEYLSRDLPYKLTPN--DVFVTS 107 (415)
Q Consensus 36 ~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~------~~~g~~~lr~~ia~~~~~~~~~~~~~~--~i~i~~ 107 (415)
.-|+|=... ...++.+.+++-..+.+....+|| -.+-..+++....+..++.+|...... +|- ..
T Consensus 55 ~~ieLIASE------N~~S~aV~~a~gS~ltnKYaEGyPg~RyYgGce~vD~iE~la~~rak~lF~a~~A~w~VNVQ-P~ 127 (490)
T 3ou5_A 55 RGLELIASE------NFCSRAALEALGSCLNNKYSEGYPGKRYYGGAEVVDEIELLCQRRALEAFDLDPAQWGVNVQ-PY 127 (490)
T ss_dssp HSEECCTTC------CCCCHHHHHHHTSGGGTCCCCC----------CHHHHHHHHHHHHHHHHTTCCTTTEEEECC-CS
T ss_pred cCceEecCC------CcCCHHHHHHhcCcccccccCCCCCccccCCChHHHHHHHHHHHHHHHHhCCCccccCCCCC-cC
Confidence 345554443 456788988888777653333443 222244555555555555565332211 333 34
Q ss_pred ChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHH--------HhCC--CeEEEeeccCCCCCCCChhHHHhhcCC-CceE
Q 014936 108 GCTQAIDVAMALLSRPGANILLPRPGFPIYELSA--------AFRH--IEVRHFDLLPDKGWEVDLDDIESLADQ-NTVA 176 (415)
Q Consensus 108 g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~--------~~~g--~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~ 176 (415)
+|++|+..++.++++|||+|+..+..+.++...- ...| .+...+++++++ ..+|.+++++.... ++++
T Consensus 128 SGs~AN~avy~All~PGD~ilg~~l~~GGHltHg~~~~~~~v~~sg~~~~~~~Y~vd~~t-~~IDyd~~~~~A~~~kPkl 206 (490)
T 3ou5_A 128 SGSPANLAVYTALLQPHDRIMGLDLPDGGHLTHGYMSDVKRISATSIFFESMPYKLNPKT-GLIDYNQLALTARLFRPRL 206 (490)
T ss_dssp SHHHHHHHHHHHHCC-CCCEECBC----------------------------CBCEETTT-TEECHHHHHHHHHHHCCSE
T ss_pred CHHHHHHHHHHHHcCCCCEEEecccCCCCcccccccCCCcccccccccccccccccCCCC-CcccHHHHHHHHhhcCCCe
Confidence 5678889999999999999999988877653221 1112 234455565543 46999999886654 6776
Q ss_pred EEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcc-cCCCCcccccccCCCCCeEEEccCccccCCCCceEE
Q 014936 177 LVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLV-FGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLG 255 (415)
Q Consensus 177 v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~-~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G 255 (415)
|+.....+|. .+ +.+++.++|++.|.++++|-+|..+. -.|..+.|+.. . + |+..|.+|+ +.|.|.|
T Consensus 207 Ii~G~SaY~r--~i---d~~~~reIAd~vGA~Lm~DmAHiaGLVA~g~~psP~~~-A-D---vVTtTTHKT--LrGPrGG 274 (490)
T 3ou5_A 207 IIAGTSAYAR--LI---DYARMREVCDEVKAHLLADMAHISGLVAAKVIPSPFKH-A-D---IVTTTTHKT--LRGARSG 274 (490)
T ss_dssp EEECCSSCCS--CC---CHHHHHHHHHHHTCEEEEECGGGHHHHHTTSSCCGGGT-C-S---EEEEESSST--TCSCSCE
T ss_pred EEECCccCcc--cc---CHHHHHHHHhhcccEEEechhhhhhhhcccccCCcccc-c-e---EEecccccc--ccCCCce
Confidence 6665444433 22 36777777779999999999995444 44444445432 2 2 778899999 6788889
Q ss_pred EEEeeCCCCCCC-------hHHHHHHHHhhcccc--CCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcC
Q 014936 256 WFVTTDPCGMFR-------KPKVVERMKKYFDIL--GDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEI 326 (415)
Q Consensus 256 ~~~~~~~~~~~~-------~~~~~~~~~~~~~~~--~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 326 (415)
.|.+++...-.. ..++.+++....... +++.....++.+.++.+.....++...+++.++++.|.+.|.+.
T Consensus 275 ~Il~~~~~~~~~~k~~~~~~~~~~kkin~aVFPg~qggp~~h~IAAkAVaf~Ea~~p~fk~Ya~qVv~NAkaLA~~L~~~ 354 (490)
T 3ou5_A 275 LIFYRKGVKAVDPKTGREIPYTFEDRINFAVFPSLQGGPHNHAIAAVAVALKQACTPMFREYSLQVLKNARAMADALLER 354 (490)
T ss_dssp EEEEECSEEEECC--CCEEECCCHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred EEEeccccccccccccchhHHHHHHHHHhhcCccccccchHHHHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHhC
Confidence 999876310000 003556666653322 33333333444433433223567889999999999999999988
Q ss_pred CCCcCCCCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEE----cCCC-CCCCCeEEEEe------eCChhhHH
Q 014936 327 PCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIIL----PGTA-VGLKNWLRVTF------AVDPYSLE 395 (415)
Q Consensus 327 ~~~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~----~g~~-~~~~~~iRi~~------~~~~~~l~ 395 (415)
|+.++........+++++.... . + ...++.+|.+.||.+. |+.. ...++.|||+. +..+++++
T Consensus 355 -G~~vvsGgTdnHlvLvDl~~~g---~-t-G~~ae~~Le~agItvNkN~iP~D~sp~~~SGiRiGTpa~TtRG~~e~dm~ 428 (490)
T 3ou5_A 355 -GYSLVSGGTDNHLVLVDLRPKG---L-D-GARAERVLELVSITANKNTCPGDRSAITPGGLRLGAPALTSRQFREDDFR 428 (490)
T ss_dssp -TCEEGGGSCSSSEEEEECGGGT---C-C-HHHHHHHHHHTTEECEEECCTTCCCSSSCSEEEEESHHHHHTTCCHHHHH
T ss_pred -CCeeecCCCCceEEEEeccccC---C-C-HHHHHHHHHHcCcEECCCCCCCCCCCCCCCeeEECCHHHHhCCCCHHHHH
Confidence 8885545556677888875421 1 3 3456677788999986 4431 11257899999 24678999
Q ss_pred HHHHHHHHHHH
Q 014936 396 ECLDRIKSFYQ 406 (415)
Q Consensus 396 ~~l~~l~~~~~ 406 (415)
+..+.|.+++.
T Consensus 429 ~IA~~I~~~l~ 439 (490)
T 3ou5_A 429 RVVDFIDEGVN 439 (490)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 88888887764
No 236
>3bc8_A O-phosphoseryl-tRNA(SEC) selenium transferase; disorder-order transition, phosphate-loop, pyridoxal phospha selenocysteine synthase (SECS, sepsecs); HET: LLP; 1.65A {Mus musculus} SCOP: c.67.1.9 PDB: 3bca_A* 3bcb_A*
Probab=99.72 E-value=5.4e-16 Score=145.16 Aligned_cols=318 Identities=12% Similarity=0.054 Sum_probs=190.4
Q ss_pred cHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCC----CCEEEEcCCCCcchHHHHHhCCCeEEEeecc
Q 014936 79 LPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRP----GANILLPRPGFPIYELSAAFRHIEVRHFDLL 154 (415)
Q Consensus 79 ~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~----gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~ 154 (415)
...+.+.+..++.+..|.+ +....++++|+|.+..+++.+.+++ ++.|+++..+|.+...++...|+.++.++..
T Consensus 96 ~~~~e~~~~~~~~~~lGlp-~~~~~~lV~GaT~~~~a~~L~aar~~~~~~~~viv~r~aHkSv~kAl~l~Gl~p~~v~~~ 174 (450)
T 3bc8_A 96 LNKITNSLVLNVIKLAGVH-SVASCFVVPMATGMSLTLCFLTLRHKRPKAKYIIWPRIDQKSCFKSMVTAGFEPVVIENV 174 (450)
T ss_dssp HHHHHHHHHHHHHHHHTCT-TCCEEEEESSCHHHHHHHHHHHHHHHCTTCCEEEEECCCCHHHHHHHHHTTCEEEEECCE
T ss_pred HHHHHHHHHHHHHHhCCCC-CCceEEEECCHHHHHHHHHHHHcchhhcCCCEEEEECCcHHHHHHHHHHcCCeeEEEEee
Confidence 4567778888887767643 2235688888874444444444333 8999999999999999999999998888653
Q ss_pred C-CCCCCCChhHHHhhcCC---CceEEEecCCC-CccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCC-cccc
Q 014936 155 P-DKGWEVDLDDIESLADQ---NTVALVIINPG-NPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKP-FVPM 228 (415)
Q Consensus 155 ~-~~~~~~~~~~l~~~~~~---~~~~v~i~~p~-nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~-~~~~ 228 (415)
+ ++...+|++.|++++++ ..+++++.+|+ +.+|.+ +++++|+++|++||+++++|++|+........ +...
T Consensus 175 ~~~~~~~id~~~le~aI~~~~~~~~~~Vv~t~t~~g~g~~---ddl~~Ia~ia~~~gi~l~VD~A~G~~~~~~~~l~~~a 251 (450)
T 3bc8_A 175 LEGDELRTDLKAVEAKIQELGPEHILCLHSTTACFAPRVP---DRLEELAVICANYDIPHVVNNAYGLQSSKCMHLIQQG 251 (450)
T ss_dssp EETTEEECCHHHHHHHHHHHCGGGEEEEEEESSCCTTBCC---CCHHHHHHHHHHHTCCEEEECTTTTTCHHHHHHHHHH
T ss_pred ecCccCCcCHHHHHHHHHhcCCCCEEEEEEECCcCCCcee---cCHHHHHHHHHHCCCeEEEECCCchhhhhhHhHHHHH
Confidence 2 23567999999999865 34666777774 456677 78999999999999999999999864321000 0011
Q ss_pred cccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhhccccCCchhHHHHHHHHhhCCCcHHHHHHH
Q 014936 229 GVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQAAVPSILQQPDEVFFKKT 308 (415)
Q Consensus 229 ~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~ 308 (415)
......| .++.|.+|++. .-...+++..++ ++..+.+........+.++ +......++.. ..+.+.+.
T Consensus 252 ~~~~~AD--~~v~S~HK~l~-a~~~~~~l~~rd-------~~~~~~~~~~~~g~~s~Sp-sL~l~~~l~~~-G~~g~~~~ 319 (450)
T 3bc8_A 252 ARVGRID--AFVQSLDKNFM-VPVGGAIIAGFN-------EPFIQDISKMYPGRASASP-SLDVLITLLSL-GCSGYRKL 319 (450)
T ss_dssp HHHSCCC--EEEEEHHHHHS-CCSSCEEEEESC-------HHHHHHHHHHSCSCBCSHH-HHHHHHHHHHH-HHHHHHHH
T ss_pred hcccCCC--EEEECCccCCC-chhccEEEEecC-------HHHHHHHHHHhhcCCcccH-HHHHHHHHHHH-HHHHHHHH
Confidence 1111111 56779999954 334456666644 3455555443311122233 22222223322 34556666
Q ss_pred HHHHHHHHHHHHHHhhcCC---CCcCCCCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcC---eEEEc--------C
Q 014936 309 LNLLKQSVDICYNKIKEIP---CISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEES---VIILP--------G 374 (415)
Q Consensus 309 ~~~~~~~~~~l~~~l~~~~---~~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~g---i~v~~--------g 374 (415)
.++..++.+++.+.|++++ +..+...+..+.-..+.++........+...+...+ ...| .-+.+ |
T Consensus 320 i~~~~~~a~~l~~~l~~~~~~~g~~~l~~~~~~~~~~~~l~~~~~~~~~D~tkl~i~~-~~~g~sG~~v~~~~~~~~~~~ 398 (450)
T 3bc8_A 320 LKERKEMFVYLSTQLKKLAEAHNERLLQTPHNPISLAMTLKTIDGHHDKAVTQLGSML-FTRQVSGARAVPLGNVQTVSG 398 (450)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCCBCCCTTCSSEEEEECTTTSSSSSCHHHHHHHHH-HHTTCCSCEEECSCCEEEETT
T ss_pred HHHHHHHHHHHHHHHHhhHHhcCceecCCccCCCcceeecccccccccCCCceeEEEe-cCCCCccceeeecccccchhH
Confidence 6666777788888887665 665332232221122222211000001344554444 2223 33331 0
Q ss_pred C---CCC------CCCeEEEEe--eCChhhHHHHHHHHHHHHHHHHHHhh
Q 014936 375 T---AVG------LKNWLRVTF--AVDPYSLEECLDRIKSFYQRHAKQLQ 413 (415)
Q Consensus 375 ~---~~~------~~~~iRi~~--~~~~~~l~~~l~~l~~~~~~~~~~~~ 413 (415)
. .|+ ...+|-+.+ +.++++++.++++|.++.+++.+++.
T Consensus 399 ~~l~~~gi~~E~~~~~~i~~~~sig~~~~di~~l~~~L~~~~~~~~~~~~ 448 (450)
T 3bc8_A 399 HTFRGFMSHADNYPCAYLNAAAAIGMKMQDVDLFIKRLDKCLNIVRKEQT 448 (450)
T ss_dssp EEEETTTTTSSCCSSCEEEEECCTTCCHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHcCCeeecCCCCcEEEEecCCCCHHHHHHHHHHHHHHHHHHHhhhc
Confidence 1 111 135565555 57899999999999999888777653
No 237
>2yvq_A Carbamoyl-phosphate synthase; conserved hypothetical protein, structural genomics, NPPSFA; 1.98A {Homo sapiens}
Probab=77.25 E-value=21 Score=27.17 Aligned_cols=109 Identities=13% Similarity=0.115 Sum_probs=64.9
Q ss_pred CCCCCcEEEeCCh--HHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCc
Q 014936 97 KLTPNDVFVTSGC--TQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNT 174 (415)
Q Consensus 97 ~~~~~~i~i~~g~--~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 174 (415)
.++...++++-+- -..+.-+.+.+.+-|-+|+.+..+ ...++..|+.+..+.-..+++..-+...+...+.++.
T Consensus 21 ~lP~~gvliSv~d~dK~~l~~~a~~l~~lGf~i~AT~GT----a~~L~~~Gi~v~~v~k~~egg~~~~~~~i~d~i~~g~ 96 (143)
T 2yvq_A 21 KIPQKGILIGIQQSFRPRFLGVAEQLHNEGFKLFATEAT----SDWLNANNVPATPVAWPSQEGQNPSLSSIRKLIRDGS 96 (143)
T ss_dssp CCCCSEEEEECCGGGHHHHHHHHHHHHTTTCEEEEEHHH----HHHHHHTTCCCEEECCGGGC-----CBCHHHHHHTTS
T ss_pred CCCCCCEEEEecccchHHHHHHHHHHHHCCCEEEECchH----HHHHHHcCCeEEEEEeccCCCcccccccHHHHHHCCC
Confidence 3333346776565 444555666777778887766533 4456778888887754332211001123444555555
Q ss_pred eEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEc
Q 014936 175 VALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIAD 212 (415)
Q Consensus 175 ~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D 212 (415)
..+++..|..- .-+..+-..|.+.|-++|++++..
T Consensus 97 i~lVInt~~~~---~~~~~d~~~iRR~Av~~~IP~~T~ 131 (143)
T 2yvq_A 97 IDLVINLPNNN---TKFVHDNYVIRRTAVDSGIPLLTN 131 (143)
T ss_dssp CCEEEECCCCC---GGGHHHHHHHHHHHHHTTCCEECS
T ss_pred ceEEEECCCCC---CcCCccHHHHHHHHHHhCCCeEcC
Confidence 55677666431 122578899999999999998753
No 238
>1ofu_X SULA, hypothetical protein PA3008; bacterial cell division inhibitor, SULA protein; HET: GDP; 2.1A {Pseudomonas aeruginosa} SCOP: c.37.1.22
Probab=71.76 E-value=25 Score=25.86 Aligned_cols=102 Identities=12% Similarity=-0.028 Sum_probs=60.1
Q ss_pred cEEEeCChHHHHHHHHH---HhcC--CCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceE
Q 014936 102 DVFVTSGCTQAIDVAMA---LLSR--PGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVA 176 (415)
Q Consensus 102 ~i~i~~g~~~al~~~~~---~l~~--~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 176 (415)
+++....+...+..++. .+.. .+.-|+...|.+..+...+...|++...+-.....+-.-.++.+|++++.....
T Consensus 6 Ell~~~~g~~e~~lLlp~L~~l~~~~~~r~ilwi~pp~~~~~~~L~~~Gl~~~rll~v~~~~~~d~lwa~EqaLrsg~~~ 85 (119)
T 1ofu_X 6 ELSLSGLPGHCLTLLAPILRELSEEQDARWLTLIAPPASLTHEWLRRAGLNRERILLLQAKDNAAALALSCEALRLGRSH 85 (119)
T ss_dssp EEEEESCHHHHHHHHHHHHHHHTTCSSSSEEEEESCCTTSCHHHHHHTTCCTTSEEEECCSSHHHHHHHHHHHHHHTCEE
T ss_pred EEeecCCCccHHHHHHHHHHHhcccccCccEEEECCCCCCCHHHHHHcCCChHHEEEEECCCcHHHHHHHHHHHhcCCcc
Confidence 44554444444444443 3443 456677778888888999998997643322111111111356678888777666
Q ss_pred EEecCCCCccccCCCHHHHHHHHHHHhhcCcE
Q 014936 177 LVIINPGNPCGNVYSYQHLQKLAETANKLKTL 208 (415)
Q Consensus 177 v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~ 208 (415)
.++..+.. ++..+.+++--.|++-+..
T Consensus 86 aVl~wl~~-----l~~~~~RRLqlAA~~g~~~ 112 (119)
T 1ofu_X 86 TVVSWLEP-----LSRAARKQLSRAAQLGQAQ 112 (119)
T ss_dssp EEEECCSS-----CCHHHHHHHHHHHHHHTCE
T ss_pred EEEECCCc-----CChHHHHHHHHHHHhCCCe
Confidence 66666432 5667788887777765554
No 239
>1oft_A SULA, hypothetical protein PA3008; bacterial cell division inhibitor, FTSZ, SULA protein; 2.9A {Pseudomonas aeruginosa} SCOP: c.37.1.22
Probab=71.18 E-value=35 Score=26.63 Aligned_cols=102 Identities=10% Similarity=-0.017 Sum_probs=61.2
Q ss_pred CcEEEeCChHHHHHHHHHH---hcC--CCCEEEEcCCCCcchHHHHHhCCCeEEEeec-cCCCCCCCChhHHHhhcCCCc
Q 014936 101 NDVFVTSGCTQAIDVAMAL---LSR--PGANILLPRPGFPIYELSAAFRHIEVRHFDL-LPDKGWEVDLDDIESLADQNT 174 (415)
Q Consensus 101 ~~i~i~~g~~~al~~~~~~---l~~--~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~l~~~~~~~~ 174 (415)
.+++....+...+..+... +.. .+..|+...|-+..+...+...|++...+-. .+.+. .-.+...|++++...
T Consensus 47 ~Ell~~~~g~gel~LL~P~La~l~~~~~~r~vlwI~Pp~~l~~~~L~~~Gl~~~rll~v~~~~~-~daLwa~EqALrsG~ 125 (161)
T 1oft_A 47 SELSLSGLPGHCLTLLAPILRELSEEQDARWLTLIAPPASLTHEWLRRAGLNRERILLLQAKDN-AAALALSCEALRLGR 125 (161)
T ss_dssp EEEEEESCHHHHHHHHHHHHHHHHTCSSSSEEEEESCCTTSCHHHHHHTTCCGGGEEEECCSST-THHHHHHHHHHHTTC
T ss_pred EEEccCCCcHHHHHHHHHHHHHhcccccCccEEEECCCCCCCHHHHHHcCCCHHHEEEEECCCh-HHHHHHHHHHHhcCC
Confidence 3566554444434333333 332 4556777777778889999999976433221 11111 113677888888777
Q ss_pred eEEEecCCCCccccCCCHHHHHHHHHHHhhcCcE
Q 014936 175 VALVIINPGNPCGNVYSYQHLQKLAETANKLKTL 208 (415)
Q Consensus 175 ~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~ 208 (415)
...++..+.. ++..+.+++---|+.-+..
T Consensus 126 ~~aVl~Wl~~-----l~~~~~RRLqlAAe~g~~~ 154 (161)
T 1oft_A 126 SHTVVSWLEP-----LSRAARKQLSRAAQLGQAQ 154 (161)
T ss_dssp EEEEEECCSS-----CCHHHHHHHHHHHHHTTCE
T ss_pred ccEEEECCCc-----CChHHHHHHHHHHHhCCCe
Confidence 6677766442 5667788887777765554
No 240
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=58.65 E-value=41 Score=28.85 Aligned_cols=96 Identities=13% Similarity=0.169 Sum_probs=53.0
Q ss_pred cEEEeCChHHHH-HHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCC-----Cce
Q 014936 102 DVFVTSGCTQAI-DVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ-----NTV 175 (415)
Q Consensus 102 ~i~i~~g~~~al-~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~-----~~~ 175 (415)
.+++.+|++.+| ..+...|.+.|..|++..-.-......++..|.+...+..+- -|.+++++.++. ...
T Consensus 30 KvalVTGas~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~~g~~~~~~~~Dv-----~~~~~v~~~~~~~~~~~G~i 104 (273)
T 4fgs_A 30 KIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEIGGGAVGIQADS-----ANLAELDRLYEKVKAEAGRI 104 (273)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTCEEEECCT-----TCHHHHHHHHHHHHHHHSCE
T ss_pred CEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCCeEEEEecC-----CCHHHHHHHHHHHHHHcCCC
Confidence 454444444444 444555678898888765443344455566677766666543 245555544432 223
Q ss_pred EEEecCC-CCcccc--CCCHHHHHHHHHHH
Q 014936 176 ALVIINP-GNPCGN--VYSYQHLQKLAETA 202 (415)
Q Consensus 176 ~v~i~~p-~nptG~--~~~~~~l~~i~~~~ 202 (415)
-++++|. .++.+- -++.+++.++.++-
T Consensus 105 DiLVNNAG~~~~~~~~~~~~e~w~~~~~vN 134 (273)
T 4fgs_A 105 DVLFVNAGGGSMLPLGEVTEEQYDDTFDRN 134 (273)
T ss_dssp EEEEECCCCCCCCCTTSCCHHHHHHHHHHH
T ss_pred CEEEECCCCCCCCChhhccHHHHHHHHHHH
Confidence 3555555 222222 35778888887753
No 241
>3gh5_A HEX1, beta-hexosaminidase; beta-N-acetylhexosaminidase, glycosphingolipids, paenibacill GH20, hydrolase, structural genomics, NPPSFA; HET: NAG; 1.60A {Paenibacillus SP} PDB: 3gh4_A* 3gh7_A* 3sur_A* 3sus_A* 3sut_A* 3suu_A* 3suv_A* 3suw_A*
Probab=54.73 E-value=64 Score=30.65 Aligned_cols=111 Identities=19% Similarity=0.249 Sum_probs=62.3
Q ss_pred CCCCCCcEEEeCChHHHHHHHHHHhc---CC---------C-C-----EEEEcCCCCcc-------------------hH
Q 014936 96 YKLTPNDVFVTSGCTQAIDVAMALLS---RP---------G-A-----NILLPRPGFPI-------------------YE 138 (415)
Q Consensus 96 ~~~~~~~i~i~~g~~~al~~~~~~l~---~~---------g-d-----~vi~~~p~y~~-------------------~~ 138 (415)
..++++.|.|+.++..++.-.+.+|. .. | . ..|.+.|.|.- +.
T Consensus 126 L~v~~~~i~I~a~~~~G~~~glqTL~QLl~~~~~~~~~~~g~~~~lp~~~I~D~Prf~~RG~mLDvsR~f~~~~~ik~~i 205 (525)
T 3gh5_A 126 LITTSNQVTLTANKPEGVFRGNQTLLQLLPAGIEKNTVVSGVQWVIPHSNISDKPEYEYRGLMLDVARHFFTVDEVKRQI 205 (525)
T ss_dssp EEECSSEEEEEESSHHHHHHHHHHHHHHSCTTTTCSSCCCSCCCEEEEEEEEECCSCSEEEEEEECSSSCCCHHHHHHHH
T ss_pred EEEeCCEEEEEECCHHHHHHHHHHHHHHHhhhccccccccCcceeccceEEeecCCcceeccccCCCCCCCCHHHHHHHH
Confidence 34677788888887766655555542 11 2 1 24566777641 12
Q ss_pred HHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEE
Q 014936 139 LSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVI 210 (415)
Q Consensus 139 ~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li 210 (415)
+.....+.++..+-+..+.+|.+..+..-++-..... .......|-.++.+++++|++.|+++++-||
T Consensus 206 d~mA~~KlN~lH~HltDdqgwriei~~~P~Lt~~Ga~----~~~~~~~~g~YT~~di~eIv~YA~~rgI~VI 273 (525)
T 3gh5_A 206 DLASQYKINKFHMHLSDDQGWRIEIKSWPDLIEIGSK----GQVGGGPGGYYTQEQFKDIVSYAAERYIEVI 273 (525)
T ss_dssp HHHHTTTCCEEEEECBCSSCBCBCCTTSTHHHHTTTS----CCTTSSCCCCBCHHHHHHHHHHHHTTTCEEE
T ss_pred HHHHHcCCcEEEEEeccCCccccccccchhhhhccCc----cccCCCCCCCcCHHHHHHHHHHHHHcCCEEE
Confidence 3344556666665554444454443322111100000 0001223667999999999999999999887
No 242
>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*
Probab=49.42 E-value=85 Score=26.05 Aligned_cols=95 Identities=16% Similarity=0.112 Sum_probs=48.8
Q ss_pred CCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCC------C
Q 014936 100 PNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ------N 173 (415)
Q Consensus 100 ~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~------~ 173 (415)
...+++|.++...=..+.+.|.+.|.+|++..-.-..........+.++..+..+- -|.+.+++.++. +
T Consensus 6 gk~vlVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv-----~~~~~v~~~~~~~~~~~g~ 80 (247)
T 3rwb_A 6 GKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASIGKKARAIAADI-----SDPGSVKALFAEIQALTGG 80 (247)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCTTEEECCCCT-----TCHHHHHHHHHHHHHHHSC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEcCC-----CCHHHHHHHHHHHHHHCCC
Confidence 34555665554443445556677898888765544444444444566666655432 245555554431 2
Q ss_pred ceEEEecCC-CCcccc--CCCHHHHHHHHH
Q 014936 174 TVALVIINP-GNPCGN--VYSYQHLQKLAE 200 (415)
Q Consensus 174 ~~~v~i~~p-~nptG~--~~~~~~l~~i~~ 200 (415)
.. +++.+. ..+.+. -.+.+++++..+
T Consensus 81 id-~lv~nAg~~~~~~~~~~~~~~~~~~~~ 109 (247)
T 3rwb_A 81 ID-ILVNNASIVPFVAWDDVDLDHWRKIID 109 (247)
T ss_dssp CS-EEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred CC-EEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 23 344333 222222 346666666554
No 243
>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}
Probab=49.11 E-value=77 Score=26.68 Aligned_cols=96 Identities=9% Similarity=-0.013 Sum_probs=52.4
Q ss_pred cEEEeCChHHHHHH-HHHHhcCCCCEEEEcCCCC-cchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEe
Q 014936 102 DVFVTSGCTQAIDV-AMALLSRPGANILLPRPGF-PIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVI 179 (415)
Q Consensus 102 ~i~i~~g~~~al~~-~~~~l~~~gd~vi~~~p~y-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i 179 (415)
.+++.+|++.+|-. +...|.+.|.+|++..-.- ....+.++..|.+...+..+-. |.+.++..++....-+++
T Consensus 10 KvalVTGas~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~g~~~~~~~~Dv~-----d~~~v~~~~~~g~iDiLV 84 (247)
T 4hp8_A 10 RKALVTGANTGLGQAIAVGLAAAGAEVVCAARRAPDETLDIIAKDGGNASALLIDFA-----DPLAAKDSFTDAGFDILV 84 (247)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTT-----STTTTTTSSTTTCCCEEE
T ss_pred CEEEEeCcCCHHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHHhCCcEEEEEccCC-----CHHHHHHHHHhCCCCEEE
Confidence 45555555555544 4455668898887654221 2234455667877777765432 233444444433333566
Q ss_pred cCCC-Cccc--cCCCHHHHHHHHHHH
Q 014936 180 INPG-NPCG--NVYSYQHLQKLAETA 202 (415)
Q Consensus 180 ~~p~-nptG--~~~~~~~l~~i~~~~ 202 (415)
+|.. .+.+ .-++.+++.++.++-
T Consensus 85 NNAGi~~~~~~~~~~~~~w~~~~~vN 110 (247)
T 4hp8_A 85 NNAGIIRRADSVEFSELDWDEVMDVN 110 (247)
T ss_dssp ECCCCCCCCCGGGCCHHHHHHHHHHH
T ss_pred ECCCCCCCCCcccccHHHHHHHHHHH
Confidence 6552 2222 236778888887753
No 244
>1bqc_A Protein (beta-mannanase); glycosyl hydrolase, family 5, thermomonospora fusca; 1.50A {Thermobifida fusca} SCOP: c.1.8.3 PDB: 2man_A* 3man_A*
Probab=47.86 E-value=44 Score=28.94 Aligned_cols=22 Identities=0% Similarity=0.092 Sum_probs=19.8
Q ss_pred HHHHHHHHHHHhhcCcEEEEcc
Q 014936 192 YQHLQKLAETANKLKTLVIADE 213 (415)
Q Consensus 192 ~~~l~~i~~~~~~~~~~li~De 213 (415)
.+.+.+++++|.++|+.+|+|-
T Consensus 64 ~~~ld~~v~~a~~~Gi~Vild~ 85 (302)
T 1bqc_A 64 PSDVANVISLCKQNRLICMLEV 85 (302)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHHHHHCCCEEEEEe
Confidence 4889999999999999999983
No 245
>3mwd_B ATP-citrate synthase; ATP-grAsp, phosphohistidine, organic acid, lyase, transferas; HET: CIT; 2.10A {Homo sapiens} PDB: 3mwe_B*
Probab=47.76 E-value=37 Score=30.16 Aligned_cols=77 Identities=16% Similarity=0.090 Sum_probs=48.9
Q ss_pred CCCCcchHHHHHhC-CCeEEEeeccCCCCCCCChhHHHhhcC-CCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcE
Q 014936 131 RPGFPIYELSAAFR-HIEVRHFDLLPDKGWEVDLDDIESLAD-QNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTL 208 (415)
Q Consensus 131 ~p~y~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~ 208 (415)
-|+|....++.... ++++..+-+.+. .-.+.+.+++. ...+.+++....- +.++..++.++++++|+.
T Consensus 64 vpvy~sv~ea~~~~p~~DlaVi~vp~~----~a~~ai~ea~~~~Gv~~vViiT~G~------~e~~~~~l~~~a~~~g~r 133 (334)
T 3mwd_B 64 IPVFKNMADAMRKHPEVDVLINFASLR----SAYDSTMETMNYAQIRTIAIIAEGI------PEALTRKLIKKADQKGVT 133 (334)
T ss_dssp EEEESSHHHHHHHCTTCCEEEECCCTT----THHHHHHHHTTSTTCCEEEECCSCC------CHHHHHHHHHHHHHHTCE
T ss_pred ceeeCCHHHHhhcCCCCcEEEEecCHH----HHHHHHHHHHHHCCCCEEEEECCCC------CHHHHHHHHHHHHHcCCE
Confidence 36777777766554 456555544332 12466666666 4566666654332 236788999999999999
Q ss_pred EEEccccCC
Q 014936 209 VIADEVYGH 217 (415)
Q Consensus 209 li~De~~~~ 217 (415)
++==.+.+.
T Consensus 134 liGPNc~Gi 142 (334)
T 3mwd_B 134 IIGPATVGG 142 (334)
T ss_dssp EECSSCCCE
T ss_pred EEccCCccc
Confidence 887666654
No 246
>2yv2_A Succinyl-COA synthetase alpha chain; COA-binding domain, ligase, structural genomics, NPPSFA; 2.20A {Aeropyrum pernix}
Probab=47.57 E-value=24 Score=30.80 Aligned_cols=76 Identities=14% Similarity=0.128 Sum_probs=46.7
Q ss_pred CCCcchHHHHHhCC-CeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEE
Q 014936 132 PGFPIYELSAAFRH-IEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVI 210 (415)
Q Consensus 132 p~y~~~~~~~~~~g-~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li 210 (415)
|+|....+.....+ .++..+-+.++ .-.+.++++++...+.+++.. +|. +.++.+++.+.|+++++.++
T Consensus 57 ~vy~sl~el~~~~~~~DvaIi~vp~~----~~~~~v~ea~~~Gi~~vVi~t----~G~--~~~~~~~l~~~A~~~gi~vi 126 (297)
T 2yv2_A 57 PVYDSVKEALAEHPEINTSIVFVPAP----FAPDAVYEAVDAGIRLVVVIT----EGI--PVHDTMRFVNYARQKGATII 126 (297)
T ss_dssp EEESSHHHHHHHCTTCCEEEECCCGG----GHHHHHHHHHHTTCSEEEECC----CCC--CHHHHHHHHHHHHHHTCEEE
T ss_pred eeeCCHHHHhhcCCCCCEEEEecCHH----HHHHHHHHHHHCCCCEEEEEC----CCC--CHHHHHHHHHHHHHcCCEEE
Confidence 34445555554333 55554443322 346667777766777555543 232 45678999999999999888
Q ss_pred EccccCC
Q 014936 211 ADEVYGH 217 (415)
Q Consensus 211 ~De~~~~ 217 (415)
-..+.+.
T Consensus 127 GPNc~Gi 133 (297)
T 2yv2_A 127 GPNCPGA 133 (297)
T ss_dssp CSSSCEE
T ss_pred cCCCCee
Confidence 7777654
No 247
>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}
Probab=46.14 E-value=89 Score=26.54 Aligned_cols=96 Identities=14% Similarity=0.101 Sum_probs=48.7
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCC------
Q 014936 99 TPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ------ 172 (415)
Q Consensus 99 ~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~------ 172 (415)
....++||.++...=..+...|.+.|.+|++..-.-..........+.++..+..+- -|.+.+++.++.
T Consensus 26 ~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv-----~d~~~v~~~~~~~~~~~g 100 (277)
T 4dqx_A 26 NQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEIGSKAFGVRVDV-----SSAKDAESMVEKTTAKWG 100 (277)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHCTTEEEEECCT-----TCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEecC-----CCHHHHHHHHHHHHHHcC
Confidence 334455555544443445556677888887765443333444444566666665532 245555544432
Q ss_pred CceEEEecCC-CCcccc--CCCHHHHHHHHH
Q 014936 173 NTVALVIINP-GNPCGN--VYSYQHLQKLAE 200 (415)
Q Consensus 173 ~~~~v~i~~p-~nptG~--~~~~~~l~~i~~ 200 (415)
+.. +++.+. ..+.+. ..+.+++.++.+
T Consensus 101 ~iD-~lv~nAg~~~~~~~~~~~~~~~~~~~~ 130 (277)
T 4dqx_A 101 RVD-VLVNNAGFGTTGNVVTIPEETWDRIMS 130 (277)
T ss_dssp CCC-EEEECCCCCCCBCTTTSCHHHHHHHHH
T ss_pred CCC-EEEECCCcCCCCCcccCCHHHHHHHHH
Confidence 223 344443 222222 356677665554
No 248
>1oi7_A Succinyl-COA synthetase alpha chain; SCS, ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.23A {Thermus thermophilus} SCOP: c.2.1.8 c.23.4.1
Probab=46.00 E-value=19 Score=31.21 Aligned_cols=77 Identities=14% Similarity=0.167 Sum_probs=46.3
Q ss_pred CCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEE
Q 014936 132 PGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIA 211 (415)
Q Consensus 132 p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~ 211 (415)
|+|....+.......++..+-+.++ .-.+.++++++...+.+++.. +|. +.++.+++.+.++++++.++-
T Consensus 51 ~vy~sl~el~~~~~~Dv~Ii~vp~~----~~~~~~~ea~~~Gi~~vVi~t----~G~--~~~~~~~l~~~a~~~gi~vig 120 (288)
T 1oi7_A 51 PVYDTVKEAVAHHEVDASIIFVPAP----AAADAALEAAHAGIPLIVLIT----EGI--PTLDMVRAVEEIKALGSRLIG 120 (288)
T ss_dssp EEESSHHHHHHHSCCSEEEECCCHH----HHHHHHHHHHHTTCSEEEECC----SCC--CHHHHHHHHHHHHHHTCEEEE
T ss_pred EeeCCHHHHhhcCCCCEEEEecCHH----HHHHHHHHHHHCCCCEEEEEC----CCC--CHHHHHHHHHHHHHcCCEEEe
Confidence 3344445555533555544433221 235556666666667555543 232 446788999999999999888
Q ss_pred ccccCCc
Q 014936 212 DEVYGHL 218 (415)
Q Consensus 212 De~~~~~ 218 (415)
..+.+..
T Consensus 121 PNc~Gii 127 (288)
T 1oi7_A 121 GNCPGII 127 (288)
T ss_dssp SSSCEEE
T ss_pred CCCCeEE
Confidence 8876543
No 249
>2fp4_A Succinyl-COA ligase [GDP-forming] alpha-chain, mitochondrial; active site phosphohistidine residue; HET: NEP GTP; 2.08A {Sus scrofa} SCOP: c.2.1.8 c.23.4.1 PDB: 2fpg_A* 2fpi_A* 2fpp_A* 1euc_A* 1eud_A*
Probab=45.62 E-value=17 Score=31.95 Aligned_cols=77 Identities=16% Similarity=0.129 Sum_probs=47.1
Q ss_pred CCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhc-CcEEEE
Q 014936 133 GFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKL-KTLVIA 211 (415)
Q Consensus 133 ~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~-~~~li~ 211 (415)
+|....+.......++..+-++++ .-.+.++++++...+.+++..+ |. +.++..++.+.|+++ |+.+|-
T Consensus 59 vy~sl~el~~~~~vD~avI~vP~~----~~~~~~~e~i~~Gi~~iv~~t~----G~--~~~~~~~l~~~a~~~~gi~liG 128 (305)
T 2fp4_A 59 VFNTVKEAKEQTGATASVIYVPPP----FAAAAINEAIDAEVPLVVCITE----GI--PQQDMVRVKHRLLRQGKTRLIG 128 (305)
T ss_dssp EESSHHHHHHHHCCCEEEECCCHH----HHHHHHHHHHHTTCSEEEECCC----CC--CHHHHHHHHHHHTTCSSCEEEC
T ss_pred eechHHHhhhcCCCCEEEEecCHH----HHHHHHHHHHHCCCCEEEEECC----CC--ChHHHHHHHHHHHhcCCcEEEe
Confidence 344445555433555554443221 2345566666666677665554 32 336678999999999 999988
Q ss_pred ccccCCcc
Q 014936 212 DEVYGHLV 219 (415)
Q Consensus 212 De~~~~~~ 219 (415)
+.+.+...
T Consensus 129 Pnc~Gii~ 136 (305)
T 2fp4_A 129 PNCPGVIN 136 (305)
T ss_dssp SSSCEEEE
T ss_pred CCCCeEec
Confidence 88876543
No 250
>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}
Probab=45.29 E-value=98 Score=26.17 Aligned_cols=64 Identities=13% Similarity=-0.015 Sum_probs=35.9
Q ss_pred cEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhc
Q 014936 102 DVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLA 170 (415)
Q Consensus 102 ~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~ 170 (415)
.+++|.++...=..+...|.+.|.+|++..-.-..........+..+..+..+- -|.+.+++.+
T Consensus 7 ~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv-----~~~~~~~~~~ 70 (281)
T 3m1a_A 7 VWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLVAAYPDRAEAISLDV-----TDGERIDVVA 70 (281)
T ss_dssp EEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHCTTTEEEEECCT-----TCHHHHHHHH
T ss_pred EEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCCceEEEeeC-----CCHHHHHHHH
Confidence 455555544333444556667888888765554555555555565666655432 2455555444
No 251
>2gjx_A Beta-hexosaminidase alpha chain; beta-hexosaminidase A, glycosidase, TAY-sachs disease, GM2 ganglisode, TIM barrel, hydrolase; HET: NAG BMA NDG; 2.80A {Homo sapiens} SCOP: c.1.8.6 d.92.2.1 PDB: 2gk1_A*
Probab=45.26 E-value=2e+02 Score=27.18 Aligned_cols=27 Identities=26% Similarity=0.388 Sum_probs=23.5
Q ss_pred ccccCCCHHHHHHHHHHHhhcCcEEEE
Q 014936 185 PCGNVYSYQHLQKLAETANKLKTLVIA 211 (415)
Q Consensus 185 ptG~~~~~~~l~~i~~~~~~~~~~li~ 211 (415)
|.+..++.+++++|++.|+++++-||-
T Consensus 207 ~~~~~YT~~di~eiv~yA~~rgI~VIP 233 (507)
T 2gjx_A 207 PVTHIYTAQDVKEVIEYARLRGIRVLA 233 (507)
T ss_dssp TTTSCBCHHHHHHHHHHHHHTTCEEEE
T ss_pred CCCCCcCHHHHHHHHHHHHHcCCEEEE
Confidence 346679999999999999999998883
No 252
>2nu8_A Succinyl-COA ligase [ADP-forming] subunit alpha; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.2.1.8 c.23.4.1 PDB: 2nu9_A* 2nu7_A* 2nua_A* 2nu6_A* 2scu_A* 1jll_A* 1scu_A* 1jkj_A* 1cqj_A* 1cqi_A*
Probab=44.70 E-value=23 Score=30.79 Aligned_cols=75 Identities=12% Similarity=0.048 Sum_probs=45.9
Q ss_pred CCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEc
Q 014936 133 GFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIAD 212 (415)
Q Consensus 133 ~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D 212 (415)
+|..+.+.......++..+-+.++ .-.+.++++++...+.+++..+ |. +.++.+++.+.|+++++.++-.
T Consensus 52 vy~sl~el~~~~~~D~viI~tP~~----~~~~~~~ea~~~Gi~~iVi~t~----G~--~~~~~~~l~~~A~~~gv~liGP 121 (288)
T 2nu8_A 52 VFNTVREAVAATGATASVIYVPAP----FCKDSILEAIDAGIKLIITITE----GI--PTLDMLTVKVKLDEAGVRMIGP 121 (288)
T ss_dssp EESSHHHHHHHHCCCEEEECCCGG----GHHHHHHHHHHTTCSEEEECCC----CC--CHHHHHHHHHHHHHHTCEEECS
T ss_pred ccCCHHHHhhcCCCCEEEEecCHH----HHHHHHHHHHHCCCCEEEEECC----CC--CHHHHHHHHHHHHHcCCEEEec
Confidence 444555555433555555444322 3456667777666665554332 33 4577889999999999988867
Q ss_pred cccCC
Q 014936 213 EVYGH 217 (415)
Q Consensus 213 e~~~~ 217 (415)
.+.+.
T Consensus 122 Nc~Gi 126 (288)
T 2nu8_A 122 NTPGV 126 (288)
T ss_dssp SCCEE
T ss_pred CCcce
Confidence 76543
No 253
>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}
Probab=43.88 E-value=1e+02 Score=25.72 Aligned_cols=66 Identities=20% Similarity=0.066 Sum_probs=29.4
Q ss_pred CCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhc
Q 014936 100 PNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLA 170 (415)
Q Consensus 100 ~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~ 170 (415)
...+++|.++...=..+...|.+.|.+|++..-.-..........+.++..+..+- -|.+.+++.+
T Consensus 7 ~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv-----~~~~~v~~~~ 72 (257)
T 3tpc_A 7 SRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAELGAAVRFRNADV-----TNEADATAAL 72 (257)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSCC------------CEEEECCT-----TCHHHHHHHH
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCceEEEEccC-----CCHHHHHHHH
Confidence 34455665554444445556667888887765443333344444455555555432 2455555444
No 254
>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}
Probab=43.37 E-value=55 Score=28.08 Aligned_cols=68 Identities=22% Similarity=0.179 Sum_probs=38.7
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcC
Q 014936 99 TPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLAD 171 (415)
Q Consensus 99 ~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~ 171 (415)
....++||.++...=..+.+.|.+.|.+|++..-.-..........+.++..+..+. -|.+.+++.++
T Consensus 15 ~gk~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl-----~d~~~v~~~~~ 82 (291)
T 3rd5_A 15 AQRTVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTMAGQVEVRELDL-----QDLSSVRRFAD 82 (291)
T ss_dssp TTCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTSSSEEEEEECCT-----TCHHHHHHHHH
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCeeEEEcCC-----CCHHHHHHHHH
Confidence 344566666654444455556667888887765433333444445566666666532 25666666554
No 255
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=42.81 E-value=1e+02 Score=25.74 Aligned_cols=66 Identities=12% Similarity=0.041 Sum_probs=35.9
Q ss_pred CCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhc
Q 014936 100 PNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLA 170 (415)
Q Consensus 100 ~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~ 170 (415)
...+++|.++...=..+...|.+.|.+|++..-.-..........+.++..+..+- -|.+.+++.+
T Consensus 8 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~v~~~~ 73 (259)
T 4e6p_A 8 GKSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEIGPAAYAVQMDV-----TRQDSIDAAI 73 (259)
T ss_dssp TCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCT-----TCHHHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCceEEEeeC-----CCHHHHHHHH
Confidence 34566666554444455566777888887765433333444444455555555432 2455555444
No 256
>2yv1_A Succinyl-COA ligase [ADP-forming] subunit alpha; COA-binding domain, structural genomics, NPPSFA; 1.70A {Methanocaldococcus jannaschii}
Probab=42.80 E-value=17 Score=31.66 Aligned_cols=76 Identities=12% Similarity=0.080 Sum_probs=45.6
Q ss_pred CCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEE
Q 014936 132 PGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIA 211 (415)
Q Consensus 132 p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~ 211 (415)
|+|..+.+.......++..+-+.++ .-.+.++++++...+.+++.. +|. +.++.+++.+.|+++++.++-
T Consensus 57 ~vy~sl~el~~~~~~Dv~ii~vp~~----~~~~~v~ea~~~Gi~~vVi~t----~G~--~~~~~~~l~~~A~~~gi~viG 126 (294)
T 2yv1_A 57 PVFDTVKEAVKETDANASVIFVPAP----FAKDAVFEAIDAGIELIVVIT----EHI--PVHDTMEFVNYAEDVGVKIIG 126 (294)
T ss_dssp EEESSHHHHHHHHCCCEEEECCCHH----HHHHHHHHHHHTTCSEEEECC----SCC--CHHHHHHHHHHHHHHTCEEEC
T ss_pred eeeCCHHHHhhcCCCCEEEEccCHH----HHHHHHHHHHHCCCCEEEEEC----CCC--CHHHHHHHHHHHHHcCCEEEc
Confidence 3344455555433455544433221 235566666666667555433 233 446789999999999998887
Q ss_pred ccccCC
Q 014936 212 DEVYGH 217 (415)
Q Consensus 212 De~~~~ 217 (415)
..+.+.
T Consensus 127 PNc~Gi 132 (294)
T 2yv1_A 127 PNTPGI 132 (294)
T ss_dssp SSCCEE
T ss_pred CCCcee
Confidence 777654
No 257
>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A
Probab=40.75 E-value=86 Score=26.44 Aligned_cols=67 Identities=21% Similarity=0.050 Sum_probs=37.1
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhc
Q 014936 99 TPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLA 170 (415)
Q Consensus 99 ~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~ 170 (415)
....++||.++...=..+...|.+.|..|++..-.-..........+.++..+..+- -|.+.+++.+
T Consensus 26 ~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv-----~d~~~v~~~~ 92 (266)
T 3grp_A 26 TGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADLGKDVFVFSANL-----SDRKSIKQLA 92 (266)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCSSEEEEECCT-----TSHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEeec-----CCHHHHHHHH
Confidence 334555555554443445556677888887765433334444555566666666533 2455555444
No 258
>1now_A Beta-hexosaminidase beta chain; (beta/alpha)8-barrel, homodimer, family 20 glycosidase, HYDR; HET: NAG IFG; 2.20A {Homo sapiens} SCOP: c.1.8.6 d.92.2.1 PDB: 1nou_A* 1np0_A* 2gjx_B* 3lmy_A* 1o7a_A* 2gk1_B*
Probab=40.23 E-value=2.4e+02 Score=26.58 Aligned_cols=24 Identities=21% Similarity=0.246 Sum_probs=22.3
Q ss_pred ccCCCHHHHHHHHHHHhhcCcEEE
Q 014936 187 GNVYSYQHLQKLAETANKLKTLVI 210 (415)
Q Consensus 187 G~~~~~~~l~~i~~~~~~~~~~li 210 (415)
|..++.+++++|++.|+++++-||
T Consensus 214 ~~~YT~~di~eiv~yA~~rgI~VI 237 (507)
T 1now_A 214 SHVYTPNDVRMVIEYARLRGIRVL 237 (507)
T ss_dssp TSCBCHHHHHHHHHHHHHTTCEEE
T ss_pred CCCCCHHHHHHHHHHHHHcCCEEE
Confidence 667999999999999999999988
No 259
>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}
Probab=39.99 E-value=97 Score=26.21 Aligned_cols=54 Identities=9% Similarity=0.004 Sum_probs=30.5
Q ss_pred CcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeecc
Q 014936 101 NDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLL 154 (415)
Q Consensus 101 ~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~ 154 (415)
..++||.++...=..+...|.+.|.+|++..-.-..........+.++..+..+
T Consensus 31 k~vlVTGas~GIG~aia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~D 84 (281)
T 3ppi_A 31 ASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALADELGNRAEFVSTN 84 (281)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECC
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCceEEEEcC
Confidence 345565555444444555667788888776543333344444556666666553
No 260
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=39.78 E-value=1.8e+02 Score=25.29 Aligned_cols=101 Identities=8% Similarity=-0.042 Sum_probs=48.4
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchH---HHHHh-------CCCeEEEeeccCCCCCCCChhHHHh
Q 014936 99 TPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYE---LSAAF-------RHIEVRHFDLLPDKGWEVDLDDIES 168 (415)
Q Consensus 99 ~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~---~~~~~-------~g~~~~~~~~~~~~~~~~~~~~l~~ 168 (415)
....|+||.++.-.=..++..|.+.|..|++..-.-.... ..... .++.+...++ -|.+.+++
T Consensus 24 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl-------~d~~~~~~ 96 (351)
T 3ruf_A 24 SPKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDI-------RDLTTCEQ 96 (351)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCT-------TCHHHHHH
T ss_pred CCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccC-------CCHHHHHH
Confidence 4567777776443334455556667777765432211111 11111 2334333222 36788888
Q ss_pred hcCCCceEEEecCCC-CccccCCC--------HHHHHHHHHHHhhcCc
Q 014936 169 LADQNTVALVIINPG-NPCGNVYS--------YQHLQKLAETANKLKT 207 (415)
Q Consensus 169 ~~~~~~~~v~i~~p~-nptG~~~~--------~~~l~~i~~~~~~~~~ 207 (415)
+++ +...|+.+-.. ++....-+ ..-...+++.|++.++
T Consensus 97 ~~~-~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~ 143 (351)
T 3ruf_A 97 VMK-GVDHVLHQAALGSVPRSIVDPITTNATNITGFLNILHAAKNAQV 143 (351)
T ss_dssp HTT-TCSEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTC
T ss_pred Hhc-CCCEEEECCccCCcchhhhCHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 876 44445544321 11111101 1123457888887764
No 261
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=39.73 E-value=1.2e+02 Score=25.30 Aligned_cols=97 Identities=18% Similarity=0.107 Sum_probs=49.6
Q ss_pred CCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCC-----Cc
Q 014936 100 PNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ-----NT 174 (415)
Q Consensus 100 ~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~-----~~ 174 (415)
...+++|.++...=..+.+.|.+.|.+|++..-.-..........+.++..+..+. -|.+.+++.++. ..
T Consensus 8 gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv-----~~~~~v~~~~~~~~~~~g~ 82 (255)
T 4eso_A 8 GKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREEFGPRVHALRSDI-----ADLNEIAVLGAAAGQTLGA 82 (255)
T ss_dssp TCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCT-----TCHHHHHHHHHHHHHHHSS
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCcceEEEccC-----CCHHHHHHHHHHHHHHhCC
Confidence 34566666655444455566777888887765443333444444455666665533 245555444321 12
Q ss_pred eEEEecCCC-Ccccc--CCCHHHHHHHHHH
Q 014936 175 VALVIINPG-NPCGN--VYSYQHLQKLAET 201 (415)
Q Consensus 175 ~~v~i~~p~-nptG~--~~~~~~l~~i~~~ 201 (415)
.-+++.+.. .+.+. -.+.+++.+..+.
T Consensus 83 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~ 112 (255)
T 4eso_A 83 IDLLHINAGVSELEPFDQVSEASYDRQFAV 112 (255)
T ss_dssp EEEEEECCCCCCCBCGGGCCHHHHHHHHHH
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHH
Confidence 234444442 22221 2466777666553
No 262
>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*
Probab=39.32 E-value=1.7e+02 Score=24.58 Aligned_cols=95 Identities=15% Similarity=0.063 Sum_probs=47.4
Q ss_pred cEEEeCChHHHHHH-HHHHhcCCCCEEEEcCCCCcc--hHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCC-----C
Q 014936 102 DVFVTSGCTQAIDV-AMALLSRPGANILLPRPGFPI--YELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ-----N 173 (415)
Q Consensus 102 ~i~i~~g~~~al~~-~~~~l~~~gd~vi~~~p~y~~--~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~-----~ 173 (415)
.+++.+|++.++-. +...|.+.|..|++..-.-.. ..+.....+.+...+..+-. |.+++++.++. .
T Consensus 8 KvalVTGas~GIG~aia~~la~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~-----~~~~v~~~v~~~~~~~G 82 (258)
T 4gkb_A 8 KVVIVTGGASGIGGAISMRLAEERAIPVVFARHAPDGAFLDALAQRQPRATYLPVELQ-----DDAQCRDAVAQTIATFG 82 (258)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCCHHHHHHHHHHCTTCEEEECCTT-----CHHHHHHHHHHHHHHHS
T ss_pred CEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCcccHHHHHHHHhcCCCEEEEEeecC-----CHHHHHHHHHHHHHHhC
Confidence 45555555555544 445566788877665422221 22333445666666665432 44444443321 1
Q ss_pred ceEEEecCCC--CccccCCCHHHHHHHHHH
Q 014936 174 TVALVIINPG--NPCGNVYSYQHLQKLAET 201 (415)
Q Consensus 174 ~~~v~i~~p~--nptG~~~~~~~l~~i~~~ 201 (415)
..-++++|.. .+...-.+.+++.+..+.
T Consensus 83 ~iDiLVNnAGi~~~~~~~~~~e~~~~~~~v 112 (258)
T 4gkb_A 83 RLDGLVNNAGVNDGIGLDAGRDAFVASLER 112 (258)
T ss_dssp CCCEEEECCCCCCCCCTTSCHHHHHHHHHH
T ss_pred CCCEEEECCCCCCCCCccCCHHHHHHHHHH
Confidence 2234555552 233334677777776654
No 263
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=38.74 E-value=95 Score=26.37 Aligned_cols=65 Identities=12% Similarity=-0.019 Sum_probs=34.0
Q ss_pred CcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhc
Q 014936 101 NDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLA 170 (415)
Q Consensus 101 ~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~ 170 (415)
..++||.++...=..+...|.+.|.+|++..-.-..........+.++..+..+. -|.+.+++.+
T Consensus 30 k~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv-----~d~~~v~~~~ 94 (277)
T 3gvc_A 30 KVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKIGCGAAACRVDV-----SDEQQIIAMV 94 (277)
T ss_dssp CEEEETTTTSTHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHCSSCEEEECCT-----TCHHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCcceEEEecC-----CCHHHHHHHH
Confidence 3455555443333344555667888887765433333444444465666555432 2455555443
No 264
>2gjh_A Designed protein; obligate symmetric HOMO-dimer, de novo protein; NMR {}
Probab=38.54 E-value=59 Score=19.17 Aligned_cols=27 Identities=11% Similarity=0.145 Sum_probs=20.2
Q ss_pred eEEEEe-eCChhhHHHHHHHHHHHHHHH
Q 014936 382 WLRVTF-AVDPYSLEECLDRIKSFYQRH 408 (415)
Q Consensus 382 ~iRi~~-~~~~~~l~~~l~~l~~~~~~~ 408 (415)
.+|||+ +.++.+-++....|-+++.++
T Consensus 3 rvrisitartkkeaekfaailikvfael 30 (62)
T 2gjh_A 3 RVRISITARTKKEAEKFAAILIKVFAEL 30 (62)
T ss_dssp EEEEEEECSSHHHHHHHHHHHHHHHHHT
T ss_pred eEEEEEEecchhHHHHHHHHHHHHHHHh
Confidence 589999 467777788877777776654
No 265
>2e8y_A AMYX protein, pullulanase; multiple domain, beta-alpha-barrel, alpha-amylase-family, HY; 2.11A {Bacillus subtilis} PDB: 2e8z_A* 2e9b_A*
Probab=38.50 E-value=17 Score=36.40 Aligned_cols=28 Identities=25% Similarity=0.362 Sum_probs=25.5
Q ss_pred HHHHHHHHHHHhhcCcEEEEccccCCcc
Q 014936 192 YQHLQKLAETANKLKTLVIADEVYGHLV 219 (415)
Q Consensus 192 ~~~l~~i~~~~~~~~~~li~De~~~~~~ 219 (415)
.++++++++-|+++|+-||.|-++-+..
T Consensus 315 ~~dfk~LV~~aH~~GI~VIlDvV~NHt~ 342 (718)
T 2e8y_A 315 KTELKQMINTLHQHGLRVILDVVFNHVY 342 (718)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECTTCCS
T ss_pred HHHHHHHHHHHHHCCCEEEEEEeccccc
Confidence 3999999999999999999999997754
No 266
>1c7s_A Beta-N-acetylhexosaminidase; glycosyl hydrolase, chitinolysis, A/B(TIM)-barrel, site directed mutagenesis; HET: CBS; 1.80A {Serratia marcescens} SCOP: b.1.18.2 b.2.2.3 c.1.8.6 d.92.2.1 PDB: 1c7t_A* 1qba_A 1qbb_A*
Probab=38.09 E-value=70 Score=32.49 Aligned_cols=26 Identities=23% Similarity=0.249 Sum_probs=23.5
Q ss_pred ccccCCCHHHHHHHHHHHhhcCcEEE
Q 014936 185 PCGNVYSYQHLQKLAETANKLKTLVI 210 (415)
Q Consensus 185 ptG~~~~~~~l~~i~~~~~~~~~~li 210 (415)
+.|-.++.+++++|++.|+++++-||
T Consensus 392 ~~~g~YT~~direIv~YA~~rgI~VI 417 (858)
T 1c7s_A 392 VYGGFFSRQDYIDIIKYAQARQIEVI 417 (858)
T ss_dssp CEECCBCHHHHHHHHHHHHTTTCEEE
T ss_pred ccCCCCCHHHHHHHHHHHHHcCCEEE
Confidence 44678999999999999999999988
No 267
>3rjz_A N-type ATP pyrophosphatase superfamily; structural genomics, PSI-biology, northeast structural genom consortium, NESG, alpha-beta protein; 2.30A {Pyrococcus furiosus} SCOP: c.26.2.1 PDB: 3h7e_A 3rk0_A* 3rk1_A* 1ru8_A 2d13_A
Probab=38.03 E-value=1.8e+02 Score=24.29 Aligned_cols=99 Identities=13% Similarity=0.108 Sum_probs=56.2
Q ss_pred CcEEEeCChHHHHHHHHHHhcCCCCEEEEc---CC------CC-----cchHHHHHhCCCeEEEeeccCCCCCCCChhHH
Q 014936 101 NDVFVTSGCTQAIDVAMALLSRPGANILLP---RP------GF-----PIYELSAAFRHIEVRHFDLLPDKGWEVDLDDI 166 (415)
Q Consensus 101 ~~i~i~~g~~~al~~~~~~l~~~gd~vi~~---~p------~y-----~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l 166 (415)
.-+++.|||-.+..++..+. +.|-.|+.- -+ .| ......++..|++...++.....+ --.+++
T Consensus 6 Kvvvl~SGGkDSs~al~~l~-~~G~eV~~L~~~~~~~~~s~~~h~~~~e~a~~~A~~LGIpl~~v~~~g~~~--~e~e~l 82 (237)
T 3rjz_A 6 DVAVLYSGGKDSNYALYWAI-KNRFSVKFLVTMVSENEESYMYHTINANLTDLQARALGIPLVKGFTQGEKE--KEVEDL 82 (237)
T ss_dssp EEEEECCSSHHHHHHHHHHH-HTTCEEEEEEEEECC--------CCSSSHHHHHHHHHTCCEEEEEC--------CHHHH
T ss_pred EEEEEecCcHHHHHHHHHHH-HcCCeEEEEEEEcCCCCCccccCCccHHHHHHHHHHcCCCEEEEECCCCch--HHHHHH
Confidence 35677888877766666554 445544311 11 11 223456788899888777642211 236777
Q ss_pred HhhcCCC-ceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEE
Q 014936 167 ESLADQN-TVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLV 209 (415)
Q Consensus 167 ~~~~~~~-~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~l 209 (415)
.++++.- ..+++ +|.+.+......+-+.|.+.|+..
T Consensus 83 ~~~l~~~~i~~vv-------~Gdi~s~yqr~r~e~vc~~~gl~~ 119 (237)
T 3rjz_A 83 KRVLSGLKIQGIV-------AGALASKYQRKRIEKVAKELGLEV 119 (237)
T ss_dssp HHHHTTSCCSEEE-------CC---CCSHHHHHHHHHHHTTCEE
T ss_pred HHHHHhcCCcEEE-------ECCcchHHHHHHHHHHHHHcCCEE
Confidence 7776542 22333 688888888888889998888754
No 268
>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0
Probab=37.66 E-value=1.8e+02 Score=24.36 Aligned_cols=66 Identities=17% Similarity=0.070 Sum_probs=36.9
Q ss_pred CCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhc
Q 014936 100 PNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLA 170 (415)
Q Consensus 100 ~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~ 170 (415)
...++||.++...=..+...|.+.|.+|++..-.-..........+.++..+..+- -|.+.+++.+
T Consensus 11 ~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv-----~~~~~v~~~~ 76 (271)
T 3tzq_B 11 NKVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASVGRGAVHHVVDL-----TNEVSVRALI 76 (271)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSCHHHHHHHHCTTCEEEECCT-----TCHHHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCCeEEEECCC-----CCHHHHHHHH
Confidence 34455555554443445556677888887765555555555555565555555432 2455555444
No 269
>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}
Probab=37.37 E-value=78 Score=25.82 Aligned_cols=93 Identities=14% Similarity=0.043 Sum_probs=46.9
Q ss_pred cEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCC---CceEEE
Q 014936 102 DVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ---NTVALV 178 (415)
Q Consensus 102 ~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~---~~~~v~ 178 (415)
.+++|.++...=..+...|.+.|.+|++..-.-..........+.++..+..+. -|.+.+++.++. .... +
T Consensus 3 ~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~v~~~~~~~~~~~d~-l 76 (230)
T 3guy_A 3 LIVITGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTNCLSNNVGYRARDL-----ASHQEVEQLFEQLDSIPST-V 76 (230)
T ss_dssp CEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTCSSCCCEEECCT-----TCHHHHHHHHHSCSSCCSE-E
T ss_pred EEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhccCeEeecC-----CCHHHHHHHHHHHhhcCCE-E
Confidence 356666654444445556667788777765443334444444555555554432 245666555432 2233 3
Q ss_pred ecCC-CCcccc--CCCHHHHHHHHH
Q 014936 179 IINP-GNPCGN--VYSYQHLQKLAE 200 (415)
Q Consensus 179 i~~p-~nptG~--~~~~~~l~~i~~ 200 (415)
+.+. ..+.+. ..+.+++++..+
T Consensus 77 v~~Ag~~~~~~~~~~~~~~~~~~~~ 101 (230)
T 3guy_A 77 VHSAGSGYFGLLQEQDPEQIQTLIE 101 (230)
T ss_dssp EECCCCCCCSCGGGSCHHHHHHHHH
T ss_pred EEeCCcCCCCccccCCHHHHHHHHH
Confidence 3333 222222 246666666554
No 270
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=36.93 E-value=97 Score=26.25 Aligned_cols=96 Identities=17% Similarity=0.082 Sum_probs=46.7
Q ss_pred CCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCc------------c---hHHHHHhCCCeEEEeeccCCCCCCCChh
Q 014936 100 PNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFP------------I---YELSAAFRHIEVRHFDLLPDKGWEVDLD 164 (415)
Q Consensus 100 ~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~------------~---~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 164 (415)
...++||.++...=..+...|.+.|.+|++..-... . ........+.++..+..+- -|.+
T Consensus 10 gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~-----~~~~ 84 (287)
T 3pxx_A 10 DKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDV-----RDRA 84 (287)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCT-----TCHH
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccC-----CCHH
Confidence 344556655544444455566778888876532210 0 1112334566666665533 2455
Q ss_pred HHHhhcCC------CceEEEecCC-CCccccCCCHHHHHHHHHH
Q 014936 165 DIESLADQ------NTVALVIINP-GNPCGNVYSYQHLQKLAET 201 (415)
Q Consensus 165 ~l~~~~~~------~~~~v~i~~p-~nptG~~~~~~~l~~i~~~ 201 (415)
.+++.++. +.. +++.+. ..+.+...+.+++.+..+.
T Consensus 85 ~v~~~~~~~~~~~g~id-~lv~nAg~~~~~~~~~~~~~~~~~~~ 127 (287)
T 3pxx_A 85 AVSRELANAVAEFGKLD-VVVANAGICPLGAHLPVQAFADAFDV 127 (287)
T ss_dssp HHHHHHHHHHHHHSCCC-EEEECCCCCCCCTTCCTHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCC-EEEECCCcCcccCcCCHHHHHHHhhh
Confidence 55444331 223 344443 2223333566777666553
No 271
>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A*
Probab=36.68 E-value=2.5e+02 Score=25.61 Aligned_cols=54 Identities=15% Similarity=0.175 Sum_probs=27.7
Q ss_pred CCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHH-HHHhcC-CCCEEEEc
Q 014936 76 TAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVA-MALLSR-PGANILLP 130 (415)
Q Consensus 76 ~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~-~~~l~~-~gd~vi~~ 130 (415)
|.|+.+--+.-.+|.+..-.+. ....+++.+|++.++-.+ ...|.. .|..|++.
T Consensus 23 p~gc~~~v~~qi~~~~~~~~~~-~~gKvaLVTGas~GIG~AiA~~LA~g~GA~Vv~~ 78 (405)
T 3zu3_A 23 PTGCEANVKKQIDYVTTEGPIA-NGPKRVLVIGASTGYGLAARITAAFGCGADTLGV 78 (405)
T ss_dssp HHHHHHHHHHHHHHHHHHCCCT-TCCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEE
T ss_pred CHHHHHHHHHHHHHHHhcCCcC-CCCCEEEEeCcchHHHHHHHHHHHHhcCCEEEEE
Confidence 4566554444445665432222 334555555555555443 344556 78887654
No 272
>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*
Probab=36.24 E-value=1.8e+02 Score=23.99 Aligned_cols=66 Identities=14% Similarity=-0.079 Sum_probs=35.1
Q ss_pred CCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhc
Q 014936 100 PNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLA 170 (415)
Q Consensus 100 ~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~ 170 (415)
...+++|.++...=..+...|.+.|.+|++..-.-.......+..+.++..+..+. -|.+.+++.+
T Consensus 12 ~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~v~~~~ 77 (265)
T 2o23_A 12 GLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNNCVFAPADV-----TSEKDVQTAL 77 (265)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHHCTTEEEEECCT-----TCHHHHHHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcHhHHHHHHHhCCceEEEEcCC-----CCHHHHHHHH
Confidence 34566665554444455556667788877654333334444444455566555432 2455555544
No 273
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=36.01 E-value=1.2e+02 Score=24.29 Aligned_cols=11 Identities=27% Similarity=0.598 Sum_probs=5.3
Q ss_pred cEEEeCChHHH
Q 014936 102 DVFVTSGCTQA 112 (415)
Q Consensus 102 ~i~i~~g~~~a 112 (415)
+++++.|++..
T Consensus 53 dVIISRGgta~ 63 (196)
T 2q5c_A 53 DAIISRGATSD 63 (196)
T ss_dssp SEEEEEHHHHH
T ss_pred eEEEECChHHH
Confidence 35555554444
No 274
>1wzu_A Quinolinate synthetase A; NAD, biosynthetic protein; 2.00A {Pyrococcus horikoshii} SCOP: c.145.1.1 PDB: 2qs0_A
Probab=36.00 E-value=45 Score=28.97 Aligned_cols=100 Identities=19% Similarity=0.138 Sum_probs=53.6
Q ss_pred cEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccC--CCCCCCChhHHHhhcCCCceEEEe
Q 014936 102 DVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLP--DKGWEVDLDDIESLADQNTVALVI 179 (415)
Q Consensus 102 ~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~--~~~~~~~~~~l~~~~~~~~~~v~i 179 (415)
+++.|++ .++..+- .+ ++++|++-.-.+-+ ....+..|.++..++-.- ..-..++++++.+..+..+.+.++
T Consensus 121 D~v~TSs--na~~~v~-~~--~~~~iif~pD~~Lg-~~l~~~~~k~~i~~~~~g~C~vh~~~t~e~i~~~~~~~P~a~v~ 194 (300)
T 1wzu_A 121 DVTVTSA--NAVEVVK-KL--DSDVVIFGPDKNLA-HYVAKMTGKKIIPVPSKGHCYVHQKFTLDDVERAKKLHPNAKLM 194 (300)
T ss_dssp SEEECTT--THHHHHH-TC--SCSEEEEESCHHHH-HHHHHHHCCEEEEC-----------CCHHHHHHHHHHCTTCEEE
T ss_pred CEEEchH--HHHHHHH-hC--CCCeEEEECChhHH-HHHHHHcCCeEEECCCCCcCCCcccCCHHHHHHHHHHCCCCEEE
Confidence 4444444 3334333 34 57777665555443 333344488777665100 001246899999988888888999
Q ss_pred cCCCCcccc------CCCHHHHHHHHHHHhhcCcEEE
Q 014936 180 INPGNPCGN------VYSYQHLQKLAETANKLKTLVI 210 (415)
Q Consensus 180 ~~p~nptG~------~~~~~~l~~i~~~~~~~~~~li 210 (415)
+||..|.-+ +.| =..|++.+++..-++|
T Consensus 195 ~HPEc~~~v~~~aD~vgS---T~~ii~~~~~~~~~iv 228 (300)
T 1wzu_A 195 IHPECIPEVQEKADIIAS---TGGMIKRACEWDEWVV 228 (300)
T ss_dssp ECTTSCHHHHHTCSEECC---HHHHHHHGGGCSEEEE
T ss_pred ECCCCCHHHHhhccccCC---HHHHHHHHHhCCCEEE
Confidence 999665311 122 2555666666553333
No 275
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=35.78 E-value=1.8e+02 Score=24.51 Aligned_cols=98 Identities=16% Similarity=0.077 Sum_probs=50.1
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHH---HHHhCCCeEEEeeccCCCCCCCChhHHHhhcC----
Q 014936 99 TPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYEL---SAAFRHIEVRHFDLLPDKGWEVDLDDIESLAD---- 171 (415)
Q Consensus 99 ~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~---~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~---- 171 (415)
+...+++|.+++..=..+...|.+.|.+|++..-.-....+ .+...|.++..+..|- -|.+++++.++
T Consensus 8 ~gKvalVTGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~g~~~~~~~~Dv-----~~~~~v~~~~~~~~~ 82 (255)
T 4g81_D 8 TGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGYDAHGVAFDV-----TDELAIEAAFSKLDA 82 (255)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCT-----TCHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeC-----CCHHHHHHHHHHHHH
Confidence 33344555444433344445567889998886543222222 2345577777665532 24455544432
Q ss_pred C-CceEEEecCC-CCcccc--CCCHHHHHHHHHH
Q 014936 172 Q-NTVALVIINP-GNPCGN--VYSYQHLQKLAET 201 (415)
Q Consensus 172 ~-~~~~v~i~~p-~nptG~--~~~~~~l~~i~~~ 201 (415)
. ...-++++|. .++.+- -++.++++++.++
T Consensus 83 ~~G~iDiLVNNAG~~~~~~~~~~~~e~~~~~~~v 116 (255)
T 4g81_D 83 EGIHVDILINNAGIQYRKPMVELELENWQKVIDT 116 (255)
T ss_dssp TTCCCCEEEECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred HCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHH
Confidence 1 1223455555 222222 3577888777664
No 276
>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}
Probab=35.71 E-value=1e+02 Score=25.61 Aligned_cols=66 Identities=9% Similarity=-0.053 Sum_probs=36.4
Q ss_pred CCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhc
Q 014936 100 PNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLA 170 (415)
Q Consensus 100 ~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~ 170 (415)
...+++|.++...=..+.+.|.+.|.+|++..-.-..........+.++..+..+. -|.+.+++.+
T Consensus 9 ~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~~~~~~ 74 (261)
T 3n74_A 9 GKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEIGDAALAVAADI-----SKEADVDAAV 74 (261)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCT-----TSHHHHHHHH
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCceEEEEecC-----CCHHHHHHHH
Confidence 34556665554433445556667888887765443344444555566666665533 2445554443
No 277
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=35.30 E-value=1.7e+02 Score=23.36 Aligned_cols=92 Identities=11% Similarity=0.062 Sum_probs=43.6
Q ss_pred EEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCC-hhHHHhhcCCCceEEEecC
Q 014936 103 VFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVD-LDDIESLADQNTVALVIIN 181 (415)
Q Consensus 103 i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~~l~~~~~~~~~~v~i~~ 181 (415)
|++|.++...=..++..|.+.|..|++..-.-..... ..+++ .+..+. -| .+.++++++. ...|+.+-
T Consensus 3 ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~---~~~~~--~~~~D~-----~d~~~~~~~~~~~-~d~vi~~a 71 (219)
T 3dqp_A 3 IFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQ---YNNVK--AVHFDV-----DWTPEEMAKQLHG-MDAIINVS 71 (219)
T ss_dssp EEEESTTSHHHHHHHHHHTTSSCEEEEEESSGGGSCC---CTTEE--EEECCT-----TSCHHHHHTTTTT-CSEEEECC
T ss_pred EEEECCCCHHHHHHHHHHHHCCCEEEEEECCccchhh---cCCce--EEEecc-----cCCHHHHHHHHcC-CCEEEECC
Confidence 6666654444445566677778777654322111110 12333 333321 25 7888888763 44444433
Q ss_pred C-CCccccCCCHHHHHHHHHHHhhc
Q 014936 182 P-GNPCGNVYSYQHLQKLAETANKL 205 (415)
Q Consensus 182 p-~nptG~~~~~~~l~~i~~~~~~~ 205 (415)
. ..+.-.-....-...+++.|++.
T Consensus 72 g~~~~~~~~~n~~~~~~l~~a~~~~ 96 (219)
T 3dqp_A 72 GSGGKSLLKVDLYGAVKLMQAAEKA 96 (219)
T ss_dssp CCTTSSCCCCCCHHHHHHHHHHHHT
T ss_pred cCCCCCcEeEeHHHHHHHHHHHHHh
Confidence 2 22111112233455666666543
No 278
>2epl_X N-acetyl-beta-D-glucosaminidase; glycoside hydrolase, family 20, GCNA, hydro; 1.40A {Streptococcus gordonii} PDB: 2epk_X 2epm_X 2epn_A* 2epo_A
Probab=35.07 E-value=2e+02 Score=27.99 Aligned_cols=102 Identities=14% Similarity=0.118 Sum_probs=55.8
Q ss_pred CCCCcEEEeCChHHHHHHHHHHh----cCCC-CEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCC
Q 014936 98 LTPNDVFVTSGCTQAIDVAMALL----SRPG-ANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ 172 (415)
Q Consensus 98 ~~~~~i~i~~g~~~al~~~~~~l----~~~g-d~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~ 172 (415)
++++.|.|+.++..++.-.+.+| ...+ ...|.+.|.|.- .|+- +++ ...--+.++.+++.++.
T Consensus 43 i~~~~i~I~a~~~~G~~~glqTL~QL~~~~~~~~~I~D~P~f~~-------RG~m---lD~--sR~~f~~~~~ik~~id~ 110 (627)
T 2epl_X 43 GRQGYYQVSYKQPHQLYRALALLSAALRSGQDEVQIEEEAAYED-------LAYM---ADC--SRNAVLNLSSAKKMIEV 110 (627)
T ss_dssp EETTEEEEEESSTTHHHHHHHHHHHHHHTTCSSEEEEECCSCSE-------EEEE---EEC--SSSCCBCHHHHHHHHHH
T ss_pred EeCCEEEEEECCHHHHHHHHHHHHHHhhcCCCceEEEeCCCCCc-------cceE---Eec--CCCCCCCHHHHHHHHHH
Confidence 45677888766655444444443 2222 356666777642 1211 221 01101456666555432
Q ss_pred ------CceEEEecC-------CC-CccccCCCHHHHHHHHHHHhhcCcEEEE
Q 014936 173 ------NTVALVIIN-------PG-NPCGNVYSYQHLQKLAETANKLKTLVIA 211 (415)
Q Consensus 173 ------~~~~v~i~~-------p~-nptG~~~~~~~l~~i~~~~~~~~~~li~ 211 (415)
++--+-+++ |. .+.|-.++.+++++|++.|+++|+-||-
T Consensus 111 ma~~KlN~lh~Hl~D~~ei~~~P~l~~~~~~YT~~di~eiv~yA~~rgI~VIP 163 (627)
T 2epl_X 111 LALMGYSTFELYMEDTYEIENQPYFGYFRGRYTVAELQEIEDYAADFDMSFVP 163 (627)
T ss_dssp HHHHTCCEEEEECSSCBCCTTCTTTTTTTTCBCHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHcCCcEEEEEeecccccCCCcccCccCCCcCHHHHHHHHHHHHHcCCEEEE
Confidence 222222222 21 2346689999999999999999998883
No 279
>3e2i_A Thymidine kinase; Zn-binding, ATP-binding, DNA synthesis, nucleotide-B transferase; HET: MSE; 2.01A {Staphylococcus aureus}
Probab=33.79 E-value=1.3e+02 Score=24.82 Aligned_cols=102 Identities=11% Similarity=0.100 Sum_probs=55.7
Q ss_pred HHHHHHHHHHhcCCCCEEEEcCCCCcch---HHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCcc
Q 014936 110 TQAIDVAMALLSRPGANILLPRPGFPIY---ELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPC 186 (415)
Q Consensus 110 ~~al~~~~~~l~~~gd~vi~~~p~y~~~---~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~npt 186 (415)
++++..+.+.. ..|.++++..|.-..- ...+...|.....+++. +.+++.+.+..+...|++-..
T Consensus 43 T~Llr~~~r~~-~~g~kvli~kp~~D~R~~~~~I~Sr~G~~~~a~~v~-------~~~di~~~i~~~~dvV~IDEa---- 110 (219)
T 3e2i_A 43 EELIRRLRRGI-YAKQKVVVFKPAIDDRYHKEKVVSHNGNAIEAINIS-------KASEIMTHDLTNVDVIGIDEV---- 110 (219)
T ss_dssp HHHHHHHHHHH-HTTCCEEEEEEC-----------CBTTBCCEEEEES-------SGGGGGGSCCTTCSEEEECCG----
T ss_pred HHHHHHHHHHH-HcCCceEEEEeccCCcchhhhHHHhcCCceeeEEeC-------CHHHHHHHHhcCCCEEEEech----
Confidence 55666655444 4577788777655421 23445566666665542 233344334444555666554
Q ss_pred ccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCccc
Q 014936 187 GNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVP 227 (415)
Q Consensus 187 G~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~ 227 (415)
+.++.+.+..+.+++ ..|+.+|+=.--.+| .+.++..
T Consensus 111 -QFf~~~~v~~l~~la-~~gi~Vi~~GLd~DF--~~~~F~~ 147 (219)
T 3e2i_A 111 -QFFDDEIVSIVEKLS-ADGHRVIVAGLDMDF--RGEPFEP 147 (219)
T ss_dssp -GGSCTHHHHHHHHHH-HTTCEEEEEEESBCT--TSCBCTT
T ss_pred -hcCCHHHHHHHHHHH-HCCCEEEEeeccccc--ccCCCcc
Confidence 446667778888888 579999976554443 3554443
No 280
>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E
Probab=33.78 E-value=1.4e+02 Score=24.62 Aligned_cols=66 Identities=14% Similarity=0.086 Sum_probs=33.2
Q ss_pred CCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhc
Q 014936 100 PNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLA 170 (415)
Q Consensus 100 ~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~ 170 (415)
...+++|.++...=..+...|.+.|.+|++..-.-..........+.....+..+- -|.+.+++.+
T Consensus 9 gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv-----~d~~~v~~~~ 74 (248)
T 3op4_A 9 GKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGKGMALNV-----TNPESIEAVL 74 (248)
T ss_dssp TCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGEEEEECCT-----TCHHHHHHHH
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcccceEEEEeC-----CCHHHHHHHH
Confidence 34455555554433445556677888887764333333333333343444444432 2455555444
No 281
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=33.75 E-value=1.5e+02 Score=25.36 Aligned_cols=50 Identities=14% Similarity=0.088 Sum_probs=35.6
Q ss_pred CCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEcc
Q 014936 158 GWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADE 213 (415)
Q Consensus 158 ~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De 213 (415)
+|-+|..++.++..-....|++... .++.++++++.+.|++.|+-++++-
T Consensus 127 dfi~d~~qi~ea~~~GAD~VlLi~a------~L~~~~l~~l~~~a~~lGl~~lvev 176 (272)
T 3tsm_A 127 DFLFDPYQVYEARSWGADCILIIMA------SVDDDLAKELEDTAFALGMDALIEV 176 (272)
T ss_dssp SCCCSTHHHHHHHHTTCSEEEEETT------TSCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred CccCCHHHHHHHHHcCCCEEEEccc------ccCHHHHHHHHHHHHHcCCeEEEEe
Confidence 3456777777765555555555432 4567899999999999999888764
No 282
>2ya0_A Putative alkaline amylopullulanase; hydrolase, glycoside hydrolase; 1.85A {Streptococcus pneumoniae} PDB: 2ya2_A*
Probab=33.50 E-value=26 Score=34.95 Aligned_cols=28 Identities=25% Similarity=0.301 Sum_probs=25.5
Q ss_pred HHHHHHHHHHHhhcCcEEEEccccCCcc
Q 014936 192 YQHLQKLAETANKLKTLVIADEVYGHLV 219 (415)
Q Consensus 192 ~~~l~~i~~~~~~~~~~li~De~~~~~~ 219 (415)
.++++++++.|+++|+-||+|-++-+..
T Consensus 254 ~~efk~lV~~~H~~Gi~VilDvV~NH~~ 281 (714)
T 2ya0_A 254 IAEFKNLINEIHKRGMGAILDVVYNHTA 281 (714)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECTTBCS
T ss_pred HHHHHHHHHHHHHCCCEEEEEeccCccc
Confidence 5999999999999999999999987654
No 283
>2yl5_A Beta-N-acetylhexosaminidase; hydrolase; 2.15A {Streptococcus pneumoniae} PDB: 2yla_A* 2yl9_A*
Probab=33.41 E-value=33 Score=31.91 Aligned_cols=27 Identities=22% Similarity=0.318 Sum_probs=24.4
Q ss_pred CccccCCCHHHHHHHHHHHhhcCcEEE
Q 014936 184 NPCGNVYSYQHLQKLAETANKLKTLVI 210 (415)
Q Consensus 184 nptG~~~~~~~l~~i~~~~~~~~~~li 210 (415)
++.|..++.+++++|++.|+++++-||
T Consensus 86 ~~~~~~YT~~di~eIv~YA~~rgI~VI 112 (442)
T 2yl5_A 86 DPNGTALTQAEVTELIEYAKSKDIGLI 112 (442)
T ss_dssp CTTCSCBCHHHHHHHHHHHHTTTCEEE
T ss_pred CCCCCCcCHHHHHHHHHHHHHcCCeee
Confidence 456778999999999999999999988
No 284
>3pff_A ATP-citrate synthase; phosphohistidine, organic acid, ATP-grAsp, lyase, transferas; HET: TLA ADP; 2.30A {Homo sapiens}
Probab=33.24 E-value=70 Score=32.34 Aligned_cols=78 Identities=17% Similarity=0.132 Sum_probs=51.9
Q ss_pred CCCCcchHHHHHhC-CCeEEEeeccCCCCCCCChhHHHhhcC-CCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcE
Q 014936 131 RPGFPIYELSAAFR-HIEVRHFDLLPDKGWEVDLDDIESLAD-QNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTL 208 (415)
Q Consensus 131 ~p~y~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~ 208 (415)
-|+|.+..+..... ++++..+-+.+. .-++.++++++ ...+.+++....-| ..+..++.++|+++|+.
T Consensus 550 vp~y~sv~ea~~~~p~~DlaVI~vP~~----~v~~av~ea~~~~Gvk~~Viis~Gf~------e~~~~~l~~~A~~~g~r 619 (829)
T 3pff_A 550 IPVFKNMADAMRKHPEVDVLINFASLR----SAYDSTMETMNYAQIRTIAIIAEGIP------EALTRKLIKKADQKGVT 619 (829)
T ss_dssp EEEESSHHHHHHHCTTCCEEEECCCTT----THHHHHHHHTTSTTCCEEEECCSCCC------HHHHHHHHHHHHHHTCE
T ss_pred cccCCcHHHHhhccCCCcEEEEeCCHH----HHHHHHHHHHhhCCCCEEEEeCCCCC------HHHHHHHHHHHHHcCCE
Confidence 47777777766654 355555544332 35778888887 67777666553333 25678899999999999
Q ss_pred EEEccccCCc
Q 014936 209 VIADEVYGHL 218 (415)
Q Consensus 209 li~De~~~~~ 218 (415)
+|==.+.+..
T Consensus 620 liGPNc~Gii 629 (829)
T 3pff_A 620 IIGPATVGGI 629 (829)
T ss_dssp EECSSCCCEE
T ss_pred EEcCCCcccC
Confidence 8866665543
No 285
>4gqr_A Pancreatic alpha-amylase; glycosyl hydrolase, diabetes, obesity, digestion, glycosidas inhibition, flavonol, drug design; HET: NAG MYC; 1.20A {Homo sapiens} PDB: 1cpu_A* 1bsi_A 1u2y_A* 1u30_A* 1u33_A* 1xcw_A* 1xcx_A* 1xd0_A* 1xd1_A* 2qmk_A* 2qv4_A* 3bai_A* 3baj_A* 3baw_A* 3ij7_A* 1hny_A* 3ij9_A* 3ij8_A* 4gqq_A* 1kgw_A* ...
Probab=33.06 E-value=27 Score=32.64 Aligned_cols=31 Identities=19% Similarity=0.426 Sum_probs=27.2
Q ss_pred cccCCCHHHHHHHHHHHhhcCcEEEEccccCCcc
Q 014936 186 CGNVYSYQHLQKLAETANKLKTLVIADEVYGHLV 219 (415)
Q Consensus 186 tG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~ 219 (415)
.|.. ++++++++-|+++|+.||+|-++-+..
T Consensus 73 ~Gt~---~df~~lv~~aH~~Gi~VilD~V~NH~~ 103 (496)
T 4gqr_A 73 SGNE---DEFRNMVTRCNNVGVRIYVDAVINHMC 103 (496)
T ss_dssp TBCH---HHHHHHHHHHHHTTCEEEEEECCSEEE
T ss_pred CCCH---HHHHHHHHHHHHCCCEEEEEEccCcCC
Confidence 4554 999999999999999999999988754
No 286
>3lkv_A Uncharacterized conserved domain protein; ATPase binding cassette, PSI, MCSG, structural genomics, Pro structure initiative; HET: PHE; 2.20A {Vibrio cholerae}
Probab=32.87 E-value=2e+02 Score=24.56 Aligned_cols=145 Identities=17% Similarity=0.173 Sum_probs=69.6
Q ss_pred HHHHHHHHHHHhcCCC-------CCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEE
Q 014936 55 HVATEAVAEALLSEKF-------NGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANI 127 (415)
Q Consensus 55 ~~~~~a~~~~~~~~~~-------~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~v 127 (415)
..+.+.+.+.+....+ ..|.+..|.......+++.+.. -++ +++++.++.++. .+..... .--|
T Consensus 23 d~~~~G~~~~L~~~G~~~g~nv~~~~~~a~gd~~~~~~~~~~l~~-----~~~-DlIiai~t~aa~-a~~~~~~--~iPV 93 (302)
T 3lkv_A 23 DATRQGLLDGLKAKGYEEGKNLEFDYKTAQGNPAIAVQIARQFVG-----ENP-DVLVGIATPTAQ-ALVSATK--TIPI 93 (302)
T ss_dssp HHHHHHHHHHHHHTTCCBTTTEEEEEEECTTCHHHHHHHHHHHHT-----TCC-SEEEEESHHHHH-HHHHHCS--SSCE
T ss_pred HHHHHHHHHHHHhhCcccCCcEEEEEEeCCCCHHHHHHHHHHHHh-----cCC-cEEEEcCCHHHH-HHHhhcC--CCCe
Confidence 4556666666653211 1344556777777777776642 133 467776655443 3333332 1223
Q ss_pred EE---cCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhh
Q 014936 128 LL---PRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANK 204 (415)
Q Consensus 128 i~---~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~ 204 (415)
+. .+|.-..+......-|.++..+... ....-.++.+.+.+....+..++.+++.+.. . ...+.+-+.+.+
T Consensus 94 Vf~~v~dp~~~~l~~~~~~~g~nvtGv~~~--~~~~~~l~l~~~l~P~~k~vgvi~~~~~~~s-~---~~~~~~~~~~~~ 167 (302)
T 3lkv_A 94 VFTAVTDPVGAKLVKQLEQPGKNVTGLSDL--SPVEQHVELIKEILPNVKSIGVVYNPGEANA-V---SLMELLKLSAAK 167 (302)
T ss_dssp EEEEESCTTTTTSCSCSSSCCSSEEEEECC--CCHHHHHHHHHHHSTTCCEEEEEECTTCHHH-H---HHHHHHHHHHHH
T ss_pred EEEecCCcchhhhcccccCCCCcEEEEECC--cCHHHHHHHHHHhCCCCCEEEEEeCCCcccH-H---HHHHHHHHHHHH
Confidence 32 3343333322223334455544311 1111123334444333344556666654322 1 345666677778
Q ss_pred cCcEEEEccc
Q 014936 205 LKTLVIADEV 214 (415)
Q Consensus 205 ~~~~li~De~ 214 (415)
+|+-++.-..
T Consensus 168 ~g~~~v~~~~ 177 (302)
T 3lkv_A 168 HGIKLVEATA 177 (302)
T ss_dssp TTCEEEEEEC
T ss_pred cCCEEEEEec
Confidence 8987775443
No 287
>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0
Probab=31.91 E-value=1.4e+02 Score=24.53 Aligned_cols=64 Identities=9% Similarity=-0.002 Sum_probs=32.1
Q ss_pred cEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhc
Q 014936 102 DVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLA 170 (415)
Q Consensus 102 ~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~ 170 (415)
.+++|.++...=..+...|.+.|.+|++..-.-..........+.++..+..+. -|.+.+++.+
T Consensus 5 ~vlVTGas~GIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~v~~~~ 68 (235)
T 3l6e_A 5 HIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLLGNAVIGIVADL-----AHHEDVDVAF 68 (235)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCT-----TSHHHHHHHH
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCceEEECCC-----CCHHHHHHHH
Confidence 455555554443444556667888887764433333333333333455555432 2455554443
No 288
>1jak_A Beta-N-acetylhexosaminidase; glycoside hydrolase, family 20, substrate-assisted catalysis, alpha/beta barrel, isofagomin inhibitor complex; HET: IFG; 1.75A {Streptomyces plicatus} SCOP: c.1.8.6 d.92.2.1 PDB: 1hp4_A* 1hp5_A* 1m01_A* 1m04_A* 1m03_A*
Probab=31.83 E-value=73 Score=30.18 Aligned_cols=25 Identities=16% Similarity=0.278 Sum_probs=22.9
Q ss_pred ccCCCHHHHHHHHHHHhhcCcEEEE
Q 014936 187 GNVYSYQHLQKLAETANKLKTLVIA 211 (415)
Q Consensus 187 G~~~~~~~l~~i~~~~~~~~~~li~ 211 (415)
|-.++.+++++|++.|+++++-||-
T Consensus 225 ~g~YT~~di~eiv~yA~~rgI~VIP 249 (512)
T 1jak_A 225 GGYYTKAEYKEIVRYAASRHLEVVP 249 (512)
T ss_dssp CCCBCHHHHHHHHHHHHHTTCEEEE
T ss_pred CCCCCHHHHHHHHHHHHHcCCEEEE
Confidence 6789999999999999999999883
No 289
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=31.30 E-value=2.3e+02 Score=24.74 Aligned_cols=54 Identities=15% Similarity=0.199 Sum_probs=29.3
Q ss_pred HHHHHHHHHHHhhhCCCCCCCCcEEEeCC---hHHHHHHHHHHhcCCCCEEEEcCCCCcc
Q 014936 80 PLTRRAIAEYLSRDLPYKLTPNDVFVTSG---CTQAIDVAMALLSRPGANILLPRPGFPI 136 (415)
Q Consensus 80 ~~lr~~ia~~~~~~~~~~~~~~~i~i~~g---~~~al~~~~~~l~~~gd~vi~~~p~y~~ 136 (415)
.+=|+++.+...+.-+ ..--|++..| +.+++..+-.+-.-.-|.|++..|.|..
T Consensus 74 ~~Er~~v~~~~v~~~~---grvpViaGvg~~st~~ai~la~~A~~~Gadavlv~~P~y~~ 130 (315)
T 3si9_A 74 HEEHKRIIELCVEQVA---KRVPVVAGAGSNSTSEAVELAKHAEKAGADAVLVVTPYYNR 130 (315)
T ss_dssp HHHHHHHHHHHHHHHT---TSSCBEEECCCSSHHHHHHHHHHHHHTTCSEEEEECCCSSC
T ss_pred HHHHHHHHHHHHHHhC---CCCcEEEeCCCCCHHHHHHHHHHHHhcCCCEEEECCCCCCC
Confidence 4555555555543211 1124555444 4666665554443334889999998863
No 290
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=31.14 E-value=2.2e+02 Score=23.40 Aligned_cols=15 Identities=7% Similarity=-0.057 Sum_probs=8.7
Q ss_pred HHHHHHHHHHhhcCc
Q 014936 193 QHLQKLAETANKLKT 207 (415)
Q Consensus 193 ~~l~~i~~~~~~~~~ 207 (415)
++.++.++-+++.|+
T Consensus 141 ee~~~~i~~l~~~G~ 155 (225)
T 2pju_A 141 EDARGQINELKANGT 155 (225)
T ss_dssp HHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHCCC
Confidence 556666666655554
No 291
>3av3_A Phosphoribosylglycinamide formyltransferase; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; HET: MSE; 1.70A {Geobacillus kaustophilus}
Probab=30.96 E-value=94 Score=25.38 Aligned_cols=88 Identities=11% Similarity=-0.000 Sum_probs=46.1
Q ss_pred EEeCChHHHHHHHHHHhcCC--CCEE--EEcCCCCcchHHHHHhCCCeEEEeeccCCCC-CCCChhHHHhhcC-CCceEE
Q 014936 104 FVTSGCTQAIDVAMALLSRP--GANI--LLPRPGFPIYELSAAFRHIEVRHFDLLPDKG-WEVDLDDIESLAD-QNTVAL 177 (415)
Q Consensus 104 ~i~~g~~~al~~~~~~l~~~--gd~v--i~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~-~~~~~~~l~~~~~-~~~~~v 177 (415)
++.+|+.+.+..++.++.+. +-.| +++++.-......++..|+.+..++.....+ -..+ +++.+.++ -++..+
T Consensus 8 vl~sG~g~~~~~~l~~l~~~~l~~~I~~Vit~~~~~~v~~~A~~~gIp~~~~~~~~~~~~~~~~-~~~~~~l~~~~~Dli 86 (212)
T 3av3_A 8 VFASGSGTNFQAIVDAAKRGDLPARVALLVCDRPGAKVIERAARENVPAFVFSPKDYPSKAAFE-SEILRELKGRQIDWI 86 (212)
T ss_dssp EECCSSCHHHHHHHHHHHTTCCCEEEEEEEESSTTCHHHHHHHHTTCCEEECCGGGSSSHHHHH-HHHHHHHHHTTCCEE
T ss_pred EEEECCcHHHHHHHHHHHhCCCCCeEEEEEeCCCCcHHHHHHHHcCCCEEEeCcccccchhhhH-HHHHHHHHhcCCCEE
Confidence 55666666667777777654 2233 4444333456677889999887654321100 0001 12222332 245566
Q ss_pred EecCCCCccccCCCHHHHH
Q 014936 178 VIINPGNPCGNVYSYQHLQ 196 (415)
Q Consensus 178 ~i~~p~nptG~~~~~~~l~ 196 (415)
++.. .|.+++.+-+.
T Consensus 87 v~a~----y~~il~~~~l~ 101 (212)
T 3av3_A 87 ALAG----YMRLIGPTLLS 101 (212)
T ss_dssp EESS----CCSCCCHHHHH
T ss_pred EEch----hhhhCCHHHHh
Confidence 6543 46777755543
No 292
>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*
Probab=30.45 E-value=2.2e+02 Score=23.50 Aligned_cols=65 Identities=17% Similarity=-0.006 Sum_probs=32.4
Q ss_pred CcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhc
Q 014936 101 NDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLA 170 (415)
Q Consensus 101 ~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~ 170 (415)
..+++|.++...=..+...|.+.|.+|++..-.-..........+.++..+..+. -|.+.+++.+
T Consensus 6 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~~~~~~ 70 (254)
T 1hdc_A 6 KTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELGDAARYQHLDV-----TIEEDWQRVV 70 (254)
T ss_dssp SEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTGGGEEEEECCT-----TCHHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEecC-----CCHHHHHHHH
Confidence 4456665544433445556667888877653322222333333344555554432 2455555444
No 293
>3qfe_A Putative dihydrodipicolinate synthase family PROT; seattle structural genomics center for infectious disease, S coccidioides, valley fever; 2.35A {Coccidioides immitis}
Probab=30.37 E-value=2.7e+02 Score=24.32 Aligned_cols=53 Identities=9% Similarity=0.103 Sum_probs=27.8
Q ss_pred HHHHHHHHHHHhhhCCCCCCCCcEEEeCC---hHHHHHHHHHHhcCCCCEEEEcCCCCc
Q 014936 80 PLTRRAIAEYLSRDLPYKLTPNDVFVTSG---CTQAIDVAMALLSRPGANILLPRPGFP 135 (415)
Q Consensus 80 ~~lr~~ia~~~~~~~~~~~~~~~i~i~~g---~~~al~~~~~~l~~~gd~vi~~~p~y~ 135 (415)
.+=|+++.+...+.-+ ..--|++..| +.+++..+-.+-.-.-|.|++..|.|+
T Consensus 63 ~~Er~~v~~~~~~~~~---grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y~ 118 (318)
T 3qfe_A 63 REERAQLIATARKAVG---PDFPIMAGVGAHSTRQVLEHINDASVAGANYVLVLPPAYF 118 (318)
T ss_dssp HHHHHHHHHHHHHHHC---TTSCEEEECCCSSHHHHHHHHHHHHHHTCSEEEECCCCC-
T ss_pred HHHHHHHHHHHHHHhC---CCCcEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEeCCccc
Confidence 4555555555543211 1124555444 456666554443323488999999775
No 294
>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}
Probab=30.36 E-value=1.6e+02 Score=24.58 Aligned_cols=52 Identities=6% Similarity=-0.070 Sum_probs=27.2
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEE
Q 014936 99 TPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRH 150 (415)
Q Consensus 99 ~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~ 150 (415)
....++||.++...=..+...|.+.|.+|++..-.-......+...+.....
T Consensus 26 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~ 77 (260)
T 3gem_A 26 SSAPILITGASQRVGLHCALRLLEHGHRVIISYRTEHASVTELRQAGAVALY 77 (260)
T ss_dssp -CCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESSCCHHHHHHHHHTCEEEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhcCCeEEE
Confidence 3445666665544444455566677877776543333333444444544433
No 295
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=30.16 E-value=1.7e+02 Score=24.66 Aligned_cols=95 Identities=12% Similarity=0.058 Sum_probs=51.0
Q ss_pred cEEEeCChHHHHHHH-HHHhcCCCCEEEEcCCCCcchH---HHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCC-----
Q 014936 102 DVFVTSGCTQAIDVA-MALLSRPGANILLPRPGFPIYE---LSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ----- 172 (415)
Q Consensus 102 ~i~i~~g~~~al~~~-~~~l~~~gd~vi~~~p~y~~~~---~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~----- 172 (415)
.+++.+|++.++-.+ ...|.+.|.+|++..-.-.... +.++..|.++..+..|-. |.+++++.++.
T Consensus 8 KvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dvt-----~~~~v~~~~~~~~~~~ 82 (254)
T 4fn4_A 8 KVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGKEVLGVKADVS-----KKKDVEEFVRRTFETY 82 (254)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTT-----SHHHHHHHHHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCC-----CHHHHHHHHHHHHHHc
Confidence 455545555555444 4456678888887653332222 233456777777765432 45555544432
Q ss_pred CceEEEecCCC--Cccc--cCCCHHHHHHHHHH
Q 014936 173 NTVALVIINPG--NPCG--NVYSYQHLQKLAET 201 (415)
Q Consensus 173 ~~~~v~i~~p~--nptG--~~~~~~~l~~i~~~ 201 (415)
...-++++|.. .+.+ .-++.+++.++.++
T Consensus 83 G~iDiLVNNAGi~~~~~~~~~~~~e~~~~~~~v 115 (254)
T 4fn4_A 83 SRIDVLCNNAGIMDGVTPVAEVSDELWERVLAV 115 (254)
T ss_dssp SCCCEEEECCCCCCTTCCGGGCCHHHHHHHHHH
T ss_pred CCCCEEEECCcccCCCCChhhCCHHHHHHHHHH
Confidence 12235566552 2333 23677888877764
No 296
>3auf_A Glycinamide ribonucleotide transformylase 1; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; 2.07A {Symbiobacterium toebii}
Probab=29.55 E-value=1.1e+02 Score=25.42 Aligned_cols=89 Identities=8% Similarity=-0.008 Sum_probs=45.5
Q ss_pred EEEeCChHHHHHHHHHHhcCC--CCEE--EEcCCCCcchHHHHHhCCCeEEEeeccCCCC-CCCChhHHHhhcC-CCceE
Q 014936 103 VFVTSGCTQAIDVAMALLSRP--GANI--LLPRPGFPIYELSAAFRHIEVRHFDLLPDKG-WEVDLDDIESLAD-QNTVA 176 (415)
Q Consensus 103 i~i~~g~~~al~~~~~~l~~~--gd~v--i~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~-~~~~~~~l~~~~~-~~~~~ 176 (415)
+++.+|+.+.+..++.++.+. +-.| ++.++.-......++..|+.+..++.....+ ...+ +++.+.++ -++.+
T Consensus 26 ~~l~SG~g~~~~~~l~~l~~~~~~~~I~~Vvt~~~~~~~~~~A~~~gIp~~~~~~~~~~~r~~~~-~~~~~~l~~~~~Dl 104 (229)
T 3auf_A 26 GVLISGSGTNLQAILDGCREGRIPGRVAVVISDRADAYGLERARRAGVDALHMDPAAYPSRTAFD-AALAERLQAYGVDL 104 (229)
T ss_dssp EEEESSCCHHHHHHHHHHHTTSSSEEEEEEEESSTTCHHHHHHHHTTCEEEECCGGGSSSHHHHH-HHHHHHHHHTTCSE
T ss_pred EEEEeCCcHHHHHHHHHHHhCCCCCeEEEEEcCCCchHHHHHHHHcCCCEEEECcccccchhhcc-HHHHHHHHhcCCCE
Confidence 345567667777777777654 2222 3334322334677888999887654321100 0001 22223332 24556
Q ss_pred EEecCCCCccccCCCHHHHH
Q 014936 177 LVIINPGNPCGNVYSYQHLQ 196 (415)
Q Consensus 177 v~i~~p~nptG~~~~~~~l~ 196 (415)
+++.. .|.+++.+-+.
T Consensus 105 iv~ag----y~~IL~~~~l~ 120 (229)
T 3auf_A 105 VCLAG----YMRLVRGPMLT 120 (229)
T ss_dssp EEESS----CCSCCCHHHHH
T ss_pred EEEcC----hhHhCCHHHHh
Confidence 66553 56777755543
No 297
>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2
Probab=29.42 E-value=2.4e+02 Score=23.23 Aligned_cols=65 Identities=15% Similarity=-0.033 Sum_probs=32.3
Q ss_pred CcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhc
Q 014936 101 NDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLA 170 (415)
Q Consensus 101 ~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~ 170 (415)
..+++|.++...=..+...|.+.|.+|++..-.-..........+.++..+..+. -|.+.+++.+
T Consensus 7 k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~v~~~~ 71 (253)
T 1hxh_A 7 KVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGERSMFVRHDV-----SSEADWTLVM 71 (253)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCTTEEEECCCT-----TCHHHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCceEEEEccC-----CCHHHHHHHH
Confidence 3455555544333444555667788887765332222333333354555554432 2455555444
No 298
>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}
Probab=29.37 E-value=2.3e+02 Score=23.77 Aligned_cols=67 Identities=12% Similarity=-0.027 Sum_probs=35.3
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHH---HHhCCCeEEEeeccCCCCCCCChhHHHhhc
Q 014936 99 TPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELS---AAFRHIEVRHFDLLPDKGWEVDLDDIESLA 170 (415)
Q Consensus 99 ~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~---~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~ 170 (415)
....+++|.++...=..+...|.+.|.+|++..-.-...... +...|.++..+..+- -|.+.+++.+
T Consensus 25 ~gk~~lVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv-----~d~~~v~~~~ 94 (271)
T 4ibo_A 25 GGRTALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNVGHDAEAVAFDV-----TSESEIIEAF 94 (271)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCT-----TCHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCC-----CCHHHHHHHH
Confidence 344555555544444445556777898888765433322222 233466666655432 2455555544
No 299
>3s5o_A 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; beta barrel, schiff base, hydroxyproline metabolis; HET: KPI; 1.97A {Homo sapiens} SCOP: c.1.10.0 PDB: 3s5n_A
Probab=29.24 E-value=2.8e+02 Score=23.99 Aligned_cols=52 Identities=8% Similarity=0.199 Sum_probs=28.9
Q ss_pred HHHHHHHHHHHhhhCCCCCCCC-cEEEeC---ChHHHHHHHHHHhcCCCCEEEEcCCCCc
Q 014936 80 PLTRRAIAEYLSRDLPYKLTPN-DVFVTS---GCTQAIDVAMALLSRPGANILLPRPGFP 135 (415)
Q Consensus 80 ~~lr~~ia~~~~~~~~~~~~~~-~i~i~~---g~~~al~~~~~~l~~~gd~vi~~~p~y~ 135 (415)
.+=|+++.+...+. +... -|++.. ++.+++..+-.+-.-.-|.+++..|.|.
T Consensus 66 ~~Er~~v~~~~~~~----~~gr~pviaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y~ 121 (307)
T 3s5o_A 66 SSERLEVVSRVRQA----MPKNRLLLAGSGCESTQATVEMTVSMAQVGADAAMVVTPCYY 121 (307)
T ss_dssp HHHHHHHHHHHHHT----SCTTSEEEEECCCSSHHHHHHHHHHHHHTTCSEEEEECCCTT
T ss_pred HHHHHHHHHHHHHH----cCCCCcEEEecCCCCHHHHHHHHHHHHHcCCCEEEEcCCCcC
Confidence 55566666666542 1222 344433 3456666554444333488888888886
No 300
>3bzy_B ESCU; auto cleavage protein, flagella, intein, T3SS, membrane, membrane protein, protein transport; 1.20A {Escherichia coli} SCOP: d.367.1.1 PDB: 3c00_B 3bzl_C 3bzo_B 3bzv_B 3c03_C 3bzz_B 3bzx_B
Probab=29.22 E-value=32 Score=23.43 Aligned_cols=25 Identities=16% Similarity=0.116 Sum_probs=20.1
Q ss_pred HHHHHHHHHHhhcCcEEEEccccCC
Q 014936 193 QHLQKLAETANKLKTLVIADEVYGH 217 (415)
Q Consensus 193 ~~l~~i~~~~~~~~~~li~De~~~~ 217 (415)
.--.+|.++++++|++++.|..-..
T Consensus 27 ~~A~~I~~~A~e~~VPi~e~~~LAr 51 (83)
T 3bzy_B 27 AKALQIIKLAELYDIPVIEDIPLAR 51 (83)
T ss_dssp HHHHHHHHHHHHTTCCEEECHHHHH
T ss_pred HHHHHHHHHHHHcCCCEEeCHHHHH
Confidence 4468889999999999999976443
No 301
>2yl6_A Beta-N-acetylhexosaminidase; peptidoglycan-anchor, hydrolase; HET: ETE; 1.60A {Streptococcus pneumoniae} PDB: 2yll_A* 2yl8_A* 3rpm_A*
Probab=29.14 E-value=32 Score=31.84 Aligned_cols=26 Identities=23% Similarity=0.273 Sum_probs=23.8
Q ss_pred ccccCCCHHHHHHHHHHHhhcCcEEE
Q 014936 185 PCGNVYSYQHLQKLAETANKLKTLVI 210 (415)
Q Consensus 185 ptG~~~~~~~l~~i~~~~~~~~~~li 210 (415)
|.|..++.+++++|++.|+++|+-||
T Consensus 84 ~~~~~YT~~di~eIv~YA~~rgI~VI 109 (434)
T 2yl6_A 84 PNGNHLTESQMTDLINYAKDKGIGLI 109 (434)
T ss_dssp TTCSCEEHHHHHHHHHHHHHTTCEEE
T ss_pred CCCCccCHHHHHHHHHHHHHcCCEEE
Confidence 45778999999999999999999988
No 302
>3bk2_A RNAse J, metal dependent hydrolase; endoribonuclease, exoribonuclease, metallo-beta-lactamase; HET: U5P; 2.10A {Thermus thermophilus} PDB: 3bk1_A* 3t3o_A* 3t3n_A*
Probab=29.13 E-value=1.3e+02 Score=28.88 Aligned_cols=78 Identities=10% Similarity=0.060 Sum_probs=44.9
Q ss_pred CCCCEEEEcCCCCcch-------HHHHHhCCCeEEEeeccC-CCCCCCChhHHHhhcCC-CceEEEecCCCCccccCCCH
Q 014936 122 RPGANILLPRPGFPIY-------ELSAAFRHIEVRHFDLLP-DKGWEVDLDDIESLADQ-NTVALVIINPGNPCGNVYSY 192 (415)
Q Consensus 122 ~~gd~vi~~~p~y~~~-------~~~~~~~g~~~~~~~~~~-~~~~~~~~~~l~~~~~~-~~~~v~i~~p~nptG~~~~~ 192 (415)
+++|.|++.....++. .......|+++....... .-..--|-++|...++. +++.++.+|.. .
T Consensus 337 ~~~~~vi~s~~~~~G~~~~~~~~~~~l~~~g~~v~~~~~~~i~~SgHa~~~eL~~~i~~~~Pk~vipvHGe-----~--- 408 (562)
T 3bk2_A 337 KPGDTVILSSSPIPGNEEAVNRVINRLYALGAYVLYPPTYKVHASGHASQEELKLILNLTTPRFFLPWHGE-----V--- 408 (562)
T ss_dssp CTTCEEEECSCCCTTCHHHHHHHHHHHHHTTCEEECTTTSSSCCCSSCCHHHHHHHHHHHCCSEEEEESBC-----H---
T ss_pred CCCCEEEEECCCCCCCeEehhhhcCceeeCCCEEEEccCCceEEeCCCCHHHHHHHHHhcCCCEEEEEcCC-----H---
Confidence 7889999988777654 334456788876432000 01112356666554432 45667766632 2
Q ss_pred HHHHHHHHHHhhcCc
Q 014936 193 QHLQKLAETANKLKT 207 (415)
Q Consensus 193 ~~l~~i~~~~~~~~~ 207 (415)
..+.++++++++.|+
T Consensus 409 ~~~~~~~~~~~~~g~ 423 (562)
T 3bk2_A 409 RHQMNFKWLAESMSR 423 (562)
T ss_dssp HHHHHHHHHHHTSSS
T ss_pred HHHHHHHHHHHHcCC
Confidence 456777777777664
No 303
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=28.57 E-value=2.5e+02 Score=23.17 Aligned_cols=96 Identities=13% Similarity=0.016 Sum_probs=48.2
Q ss_pred CCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHH---HHhCCCeEEEeeccCCCCCCCChhHHHhhcCC----
Q 014936 100 PNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELS---AAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ---- 172 (415)
Q Consensus 100 ~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~---~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~---- 172 (415)
...+++|.+++..=..+...|.+.|.+|++..-.-...... ++..|.++..+..+- -|.+.+++.++.
T Consensus 7 ~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv-----~~~~~v~~~~~~~~~~ 81 (252)
T 3h7a_A 7 NATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAGGRIVARSLDA-----RNEDEVTAFLNAADAH 81 (252)
T ss_dssp SCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCEEEEEECCT-----TCHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECcC-----CCHHHHHHHHHHHHhh
Confidence 34556665554444445556667888887765443333332 334466777776543 245555544421
Q ss_pred CceEEEecCCC-Ccccc--CCCHHHHHHHHH
Q 014936 173 NTVALVIINPG-NPCGN--VYSYQHLQKLAE 200 (415)
Q Consensus 173 ~~~~v~i~~p~-nptG~--~~~~~~l~~i~~ 200 (415)
...-+++.+.. ...+. -.+.+++.+..+
T Consensus 82 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~ 112 (252)
T 3h7a_A 82 APLEVTIFNVGANVNFPILETTDRVFRKVWE 112 (252)
T ss_dssp SCEEEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred CCceEEEECCCcCCCCCcccCCHHHHHHHHH
Confidence 12234444442 22221 245566665544
No 304
>3ecs_A Translation initiation factor EIF-2B subunit alpha; eukaryotic translation initiation factor 2balpha (EIF2balpha); 2.65A {Homo sapiens}
Probab=28.34 E-value=3e+02 Score=24.03 Aligned_cols=98 Identities=9% Similarity=0.115 Sum_probs=51.6
Q ss_pred CCCCcEEEeCChHHHHHHHHHHhcCCCC--EEEEc--CCCCcchH--HHHHhCCCeEEEeeccCCCCCCCChhHHHhhcC
Q 014936 98 LTPNDVFVTSGCTQAIDVAMALLSRPGA--NILLP--RPGFPIYE--LSAAFRHIEVRHFDLLPDKGWEVDLDDIESLAD 171 (415)
Q Consensus 98 ~~~~~i~i~~g~~~al~~~~~~l~~~gd--~vi~~--~p~y~~~~--~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~ 171 (415)
+.....++|.|.+.....++....+.|. +|++. .|.+.+.. ..+...|+++..++- ..+...++
T Consensus 119 I~~g~~ILTh~~S~tv~~~l~~A~~~gk~~~V~v~EsrP~~qG~~la~~L~~~gI~vtli~D----------sa~~~~m~ 188 (315)
T 3ecs_A 119 IKDGATILTHAYSRVVLRVLEAAVAAKKRFSVYVTESQPDLSGKKMAKALCHLNVPVTVVLD----------AAVGYIME 188 (315)
T ss_dssp CCTTEEEEECSCCHHHHHHHHHHHTTTCCEEEEEECCTTTTHHHHHHHHHHTTTCCEEEECG----------GGHHHHGG
T ss_pred cCCCCEEEEcCCcHHHHHHHHHHHHcCCeEEEEEecCCCcchHHHHHHHHHHcCCCEEEEeh----------hHHHHHHH
Confidence 3456788888877666666666555553 55555 34444322 234456777766531 12222222
Q ss_pred CCceEEE-----ecCC--CCccccCCCHHHHHHHHHHHhhcCcEEEEc
Q 014936 172 QNTVALV-----IINP--GNPCGNVYSYQHLQKLAETANKLKTLVIAD 212 (415)
Q Consensus 172 ~~~~~v~-----i~~p--~nptG~~~~~~~l~~i~~~~~~~~~~li~D 212 (415)
.-.+.++ ..|. .|..|+ ..++-.|+.+|+++++=
T Consensus 189 ~vd~VivGAd~i~~nG~v~nkiGT-------~~iAl~Ak~~~vP~~V~ 229 (315)
T 3ecs_A 189 KADLVIVGAEGVVENGGIINKIGT-------NQMAVCAKAQNKPFYVV 229 (315)
T ss_dssp GCSEEEEECSEECTTSCEEEETTH-------HHHHHHHHHTTCCEEEE
T ss_pred hCCEEEECceEEecCCCeeehhhh-------HHHHHHHHHhCCCEEEE
Confidence 2122222 2222 244554 45667788899887753
No 305
>1ht6_A AMY1, alpha-amylase isozyme 1; barley, beta-alpha-barrel, hydrolase; 1.50A {Hordeum vulgare} SCOP: b.71.1.1 c.1.8.1 PDB: 1p6w_A* 1rpk_A* 3bsg_A 2qpu_A* 1rp8_A* 1rp9_A* 2qps_A 3bsh_A* 1ava_A 1amy_A 1bg9_A*
Probab=28.18 E-value=45 Score=30.47 Aligned_cols=28 Identities=25% Similarity=0.194 Sum_probs=25.6
Q ss_pred HHHHHHHHHHHhhcCcEEEEccccCCcc
Q 014936 192 YQHLQKLAETANKLKTLVIADEVYGHLV 219 (415)
Q Consensus 192 ~~~l~~i~~~~~~~~~~li~De~~~~~~ 219 (415)
.++++++++.|+++|+.||+|-++-+..
T Consensus 68 ~~d~~~lv~~~h~~Gi~VilD~V~NH~~ 95 (405)
T 1ht6_A 68 AAELKSLIGALHGKGVQAIADIVINHRC 95 (405)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECCSBCC
T ss_pred HHHHHHHHHHHHHCCCEEEEEECcCccc
Confidence 4999999999999999999999988754
No 306
>4dzz_A Plasmid partitioning protein PARF; deviant walker BOX, DNA segregation, unknown function; HET: ADP; 1.80A {Escherichia coli} PDB: 4e03_A* 4e07_A* 4e09_A*
Probab=28.18 E-value=1.9e+02 Score=22.74 Aligned_cols=49 Identities=10% Similarity=-0.070 Sum_probs=29.0
Q ss_pred ChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCC
Q 014936 108 GCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPD 156 (415)
Q Consensus 108 g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~ 156 (415)
.+.+.+...+..+.+..|.|+++.|..............+...+++.++
T Consensus 60 ~~~~~l~~~l~~l~~~yD~viiD~~~~~~~~~~~~l~~ad~viiv~~~~ 108 (206)
T 4dzz_A 60 AASEKDVYGIRKDLADYDFAIVDGAGSLSVITSAAVMVSDLVIIPVTPS 108 (206)
T ss_dssp CCSHHHHHTHHHHTTTSSEEEEECCSSSSHHHHHHHHHCSEEEEEECSC
T ss_pred cCcHHHHHHHHHhcCCCCEEEEECCCCCCHHHHHHHHHCCEEEEEecCC
Confidence 3346666677777777799999988765433222222345555555443
No 307
>2ya1_A Putative alkaline amylopullulanase; hydrolase, glycoside hydrolase; HET: BGC GLC; 2.25A {Streptococcus pneumoniae}
Probab=27.99 E-value=36 Score=35.50 Aligned_cols=28 Identities=25% Similarity=0.301 Sum_probs=25.6
Q ss_pred HHHHHHHHHHHhhcCcEEEEccccCCcc
Q 014936 192 YQHLQKLAETANKLKTLVIADEVYGHLV 219 (415)
Q Consensus 192 ~~~l~~i~~~~~~~~~~li~De~~~~~~ 219 (415)
.++++++++.|+++|+-||+|-++-+..
T Consensus 561 ~~efk~lV~~~H~~GI~VIlDvV~NHt~ 588 (1014)
T 2ya1_A 561 IAEFKNLINEIHKRGMGAILDVVYNHTA 588 (1014)
T ss_dssp HHHHHHHHHHHHTTTCEEEEEECTTCCS
T ss_pred HHHHHHHHHHHHHcCCEEEEEEeccccc
Confidence 5999999999999999999999997754
No 308
>1i4n_A Indole-3-glycerol phosphate synthase; thermostable TIM-barrel protein, salt bridges, electrostatic interactions, lyase; 2.50A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1j5t_A
Probab=27.85 E-value=73 Score=26.88 Aligned_cols=50 Identities=14% Similarity=0.260 Sum_probs=33.1
Q ss_pred CCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccc
Q 014936 159 WEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEV 214 (415)
Q Consensus 159 ~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~ 214 (415)
|.+|.-++.++..-...++++.. ..++.++++++.+.|++.|+-+++|-.
T Consensus 109 fi~~~~qi~ea~~~GAD~ilLi~------a~l~~~~l~~l~~~a~~lGl~~lvEv~ 158 (251)
T 1i4n_A 109 FYIDTVQVKLASSVGADAILIIA------RILTAEQIKEIYEAAEELGMDSLVEVH 158 (251)
T ss_dssp CCCSTHHHHHHHHTTCSEEEEEG------GGSCHHHHHHHHHHHHTTTCEEEEEEC
T ss_pred CCCCHHHHHHHHHcCCCEEEEec------ccCCHHHHHHHHHHHHHcCCeEEEEeC
Confidence 45665566554433444554432 246668899999999999998888743
No 309
>1b93_A Protein (methylglyoxal synthase); glycolytic bypass, lyase; 1.90A {Escherichia coli} SCOP: c.24.1.2 PDB: 1egh_A 1ik4_A* 1s8a_A 1s89_A
Probab=27.81 E-value=94 Score=23.90 Aligned_cols=66 Identities=17% Similarity=0.192 Sum_probs=39.1
Q ss_pred CCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccc
Q 014936 144 RHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEV 214 (415)
Q Consensus 144 ~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~ 214 (415)
.|+++..+.-.++++ + .++...+.++...+++..| .|.|.-....+...|.+.|..+|++++.--+
T Consensus 56 ~Gl~v~~v~k~~eGG---~-p~I~d~I~~geIdlVInt~-~pl~~~~h~~D~~~IrR~A~~~~IP~~T~la 121 (152)
T 1b93_A 56 TGMNVNAMLSGPMGG---D-QQVGALISEGKIDVLIFFW-DPLNAVPHDPDVKALLRLATVWNIPVATNVA 121 (152)
T ss_dssp HCCCCEEECCGGGTH---H-HHHHHHHHTTCCCEEEEEC-CTTSCCTTHHHHHHHHHHHHHTTCCEESSHH
T ss_pred hCceeEEEEecCCCC---C-chHHHHHHCCCccEEEEcC-CcccCCcccccHHHHHHHHHHcCCCEEeCHH
Confidence 566766654222211 2 2455555555444555544 3445333368999999999999999875433
No 310
>1g94_A Alpha-amylase; beta-alpha-8-barrel, 3 domain structure, hydrolase; HET: DAF GLC; 1.74A {Pseudoalteromonas haloplanktis} SCOP: b.71.1.1 c.1.8.1 PDB: 1g9h_A* 1l0p_A 1aqm_A* 1aqh_A* 1b0i_A 1jd7_A 1jd9_A 1kxh_A*
Probab=27.73 E-value=36 Score=31.58 Aligned_cols=28 Identities=7% Similarity=0.188 Sum_probs=25.5
Q ss_pred HHHHHHHHHHHhhcCcEEEEccccCCcc
Q 014936 192 YQHLQKLAETANKLKTLVIADEVYGHLV 219 (415)
Q Consensus 192 ~~~l~~i~~~~~~~~~~li~De~~~~~~ 219 (415)
.++++++++-|+++|+.||+|-++-+..
T Consensus 64 ~~dfk~Lv~~aH~~Gi~VilD~V~NH~~ 91 (448)
T 1g94_A 64 RAQFIDMVNRCSAAGVDIYVDTLINHMA 91 (448)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEEECSEEC
T ss_pred HHHHHHHHHHHHHCCCEEEEEEeecccc
Confidence 4999999999999999999999987654
No 311
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=27.64 E-value=2.1e+02 Score=24.86 Aligned_cols=97 Identities=9% Similarity=0.006 Sum_probs=49.2
Q ss_pred CcEEEeCChHHHHHHHHHHhcCCCCEEE-EcCCC--CcchH---HHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCC-C
Q 014936 101 NDVFVTSGCTQAIDVAMALLSRPGANIL-LPRPG--FPIYE---LSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ-N 173 (415)
Q Consensus 101 ~~i~i~~g~~~al~~~~~~l~~~gd~vi-~~~p~--y~~~~---~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~-~ 173 (415)
..|+||.++...=..++..|.+.|..|. +.... ...-. ..+...++++...++ -|.+.+.++++. .
T Consensus 11 ~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~l~~~~v~~~~~Dl-------~d~~~l~~~~~~~~ 83 (346)
T 3i6i_A 11 GRVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKIFKALEDKGAIIVYGLI-------NEQEAMEKILKEHE 83 (346)
T ss_dssp CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHHHHHHHHTTCEEEECCT-------TCHHHHHHHHHHTT
T ss_pred CeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCCCCChhHHHHHHHHHhCCcEEEEeec-------CCHHHHHHHHhhCC
Confidence 4677777633322334445555565444 33322 11111 122345666655433 267888887762 3
Q ss_pred ceEEEecCC-CCccccCCCHHHHHHHHHHHhhcC-cEEEE
Q 014936 174 TVALVIINP-GNPCGNVYSYQHLQKLAETANKLK-TLVIA 211 (415)
Q Consensus 174 ~~~v~i~~p-~nptG~~~~~~~l~~i~~~~~~~~-~~li~ 211 (415)
...|+.+.. .|..| -..+++.|++.+ +..++
T Consensus 84 ~d~Vi~~a~~~n~~~-------~~~l~~aa~~~g~v~~~v 116 (346)
T 3i6i_A 84 IDIVVSTVGGESILD-------QIALVKAMKAVGTIKRFL 116 (346)
T ss_dssp CCEEEECCCGGGGGG-------HHHHHHHHHHHCCCSEEE
T ss_pred CCEEEECCchhhHHH-------HHHHHHHHHHcCCceEEe
Confidence 344444433 33332 367888888877 54443
No 312
>3o1l_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.20A {Pseudomonas syringae PV}
Probab=27.61 E-value=1.2e+02 Score=26.50 Aligned_cols=114 Identities=11% Similarity=0.082 Sum_probs=58.0
Q ss_pred CcHHHHHHHHHHHhhhCCCC------CCCCcE-EEeCChHHHHHHHHHHhcCC--CCEEEEcCCCCcchHHHHHhCCCeE
Q 014936 78 GLPLTRRAIAEYLSRDLPYK------LTPNDV-FVTSGCTQAIDVAMALLSRP--GANILLPRPGFPIYELSAAFRHIEV 148 (415)
Q Consensus 78 g~~~lr~~ia~~~~~~~~~~------~~~~~i-~i~~g~~~al~~~~~~l~~~--gd~vi~~~p~y~~~~~~~~~~g~~~ 148 (415)
...+|++.++..-.+ ++.. -.+-+| ++.||..+++..++...... +-.|...-..+......++..|+.+
T Consensus 78 ~~~~L~~~l~~la~~-l~m~~~l~~~~~~~ri~vl~Sg~g~nl~~ll~~~~~g~l~~~I~~Visn~~~~~~~A~~~gIp~ 156 (302)
T 3o1l_A 78 DLDGFREAFTPIAEE-FSMDWRITDSAQKKRVVLMASRESHCLADLLHRWHSDELDCDIACVISNHQDLRSMVEWHDIPY 156 (302)
T ss_dssp CHHHHHHHHHHHHHH-HTCEEEEEETTSCCEEEEEECSCCHHHHHHHHHHHTTCSCSEEEEEEESSSTTHHHHHTTTCCE
T ss_pred CHHHHHHHHHHHHHH-hCCeeeecccCCCcEEEEEEeCCchhHHHHHHHHHCCCCCcEEEEEEECcHHHHHHHHHcCCCE
Confidence 457888887654332 2211 123344 56677667777777765432 1233222122233456788999998
Q ss_pred EEeeccCCCCCCCChhHHHhhcCC-CceEEEecCCCCccccCCCHHHHHH
Q 014936 149 RHFDLLPDKGWEVDLDDIESLADQ-NTVALVIINPGNPCGNVYSYQHLQK 197 (415)
Q Consensus 149 ~~~~~~~~~~~~~~~~~l~~~~~~-~~~~v~i~~p~nptG~~~~~~~l~~ 197 (415)
..++....+....+ +++.+.+++ ++.++++.. .+.++|.+-+..
T Consensus 157 ~~~~~~~~~r~~~~-~~~~~~l~~~~~DliVlag----ym~IL~~~~l~~ 201 (302)
T 3o1l_A 157 YHVPVDPKDKEPAF-AEVSRLVGHHQADVVVLAR----YMQILPPQLCRE 201 (302)
T ss_dssp EECCCCSSCCHHHH-HHHHHHHHHTTCSEEEESS----CCSCCCTTHHHH
T ss_pred EEcCCCcCCHHHHH-HHHHHHHHHhCCCEEEHhH----hhhhcCHHHHhh
Confidence 88765321110011 223333332 456666653 466677555543
No 313
>1lwj_A 4-alpha-glucanotransferase; alpha-amylase family, acarbose, (beta/alpha)8 barrel; HET: ACG; 2.50A {Thermotoga maritima} SCOP: b.71.1.1 c.1.8.1 PDB: 1lwh_A*
Probab=27.36 E-value=46 Score=30.78 Aligned_cols=28 Identities=14% Similarity=0.101 Sum_probs=25.3
Q ss_pred HHHHHHHHHHHhhcCcEEEEccccCCcc
Q 014936 192 YQHLQKLAETANKLKTLVIADEVYGHLV 219 (415)
Q Consensus 192 ~~~l~~i~~~~~~~~~~li~De~~~~~~ 219 (415)
.++++++++.|+++|+.||+|-++-+..
T Consensus 69 ~~df~~lv~~aH~~Gi~VilD~V~NH~~ 96 (441)
T 1lwj_A 69 EREFKEMIEAFHDSGIKVVLDLPIHHTG 96 (441)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECTTBCC
T ss_pred HHHHHHHHHHHHHCCCEEEEEeCCCccc
Confidence 4999999999999999999999987644
No 314
>2j9r_A Thymidine kinase; TK1, DNK, lasso, transferase, ATP-binding, deoxyribonucleoside kinase, DNA synthesis, phosphate accept nucleotide-binding; HET: THM; 2.7A {Bacillus anthracis} PDB: 2ja1_A*
Probab=27.34 E-value=1.8e+02 Score=23.72 Aligned_cols=103 Identities=14% Similarity=0.086 Sum_probs=50.7
Q ss_pred hHHHHHHHHHHhcCCCCEEEEcCCCCcc---hHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCc
Q 014936 109 CTQAIDVAMALLSRPGANILLPRPGFPI---YELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNP 185 (415)
Q Consensus 109 ~~~al~~~~~~l~~~gd~vi~~~p~y~~---~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~np 185 (415)
+++++..+.++. ..|.+|++..|.-.. -...+...|..+..++.. +.+++.+.+......|++-..+.
T Consensus 42 TT~lL~~a~r~~-~~g~kVli~k~~~d~R~ge~~i~s~~g~~~~a~~~~-------~~~~~~~~~~~~~dvViIDEaQF- 112 (214)
T 2j9r_A 42 SEELIRRVRRTQ-FAKQHAIVFKPCIDNRYSEEDVVSHNGLKVKAVPVS-------ASKDIFKHITEEMDVIAIDEVQF- 112 (214)
T ss_dssp HHHHHHHHHHHH-HTTCCEEEEECC-----------------CCEEECS-------SGGGGGGGCCSSCCEEEECCGGG-
T ss_pred HHHHHHHHHHHH-HCCCEEEEEEeccCCcchHHHHHhhcCCeeEEeecC-------CHHHHHHHHhcCCCEEEEECccc-
Confidence 367777766665 467788887766442 123344446655555442 12334333433345666665444
Q ss_pred cccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCccc
Q 014936 186 CGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVP 227 (415)
Q Consensus 186 tG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~ 227 (415)
++.+.++.+.+++.. |+.+|+=.--.+ |.+.++..
T Consensus 113 ----~~~~~V~~l~~l~~~-~~~Vi~~Gl~~D--F~~~~F~~ 147 (214)
T 2j9r_A 113 ----FDGDIVEVVQVLANR-GYRVIVAGLDQD--FRGLPFGQ 147 (214)
T ss_dssp ----SCTTHHHHHHHHHHT-TCEEEEEECSBC--TTSCBCTT
T ss_pred ----CCHHHHHHHHHHhhC-CCEEEEEecccc--cccCcccc
Confidence 666777666666654 888887544333 33444433
No 315
>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*
Probab=27.06 E-value=1.8e+02 Score=24.34 Aligned_cols=97 Identities=12% Similarity=-0.023 Sum_probs=46.1
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCC-CCcc---hHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCC--
Q 014936 99 TPNDVFVTSGCTQAIDVAMALLSRPGANILLPRP-GFPI---YELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ-- 172 (415)
Q Consensus 99 ~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p-~y~~---~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~-- 172 (415)
....++||.+++..=..+...|.+.|.+|++..- .-.. ........+.++..+..+. -|.+.+++.++.
T Consensus 27 ~~k~vlVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~-----~d~~~v~~~~~~~~ 101 (269)
T 4dmm_A 27 TDRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGGEAFAVKADV-----SQESEVEALFAAVI 101 (269)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCT-----TSHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCcEEEEECCC-----CCHHHHHHHHHHHH
Confidence 3344555555444334455566778888876432 1111 1222344566666666533 245555544431
Q ss_pred ----CceEEEecCC-CCccc--cCCCHHHHHHHHHH
Q 014936 173 ----NTVALVIINP-GNPCG--NVYSYQHLQKLAET 201 (415)
Q Consensus 173 ----~~~~v~i~~p-~nptG--~~~~~~~l~~i~~~ 201 (415)
+.. +++.+. ..+.+ ...+.+++.+..+.
T Consensus 102 ~~~g~id-~lv~nAg~~~~~~~~~~~~~~~~~~~~v 136 (269)
T 4dmm_A 102 ERWGRLD-VLVNNAGITRDTLLLRMKRDDWQSVLDL 136 (269)
T ss_dssp HHHSCCC-EEEECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred HHcCCCC-EEEECCCCCCCCCcccCCHHHHHHHHHH
Confidence 223 344443 22222 12466676666553
No 316
>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*
Probab=27.04 E-value=1.9e+02 Score=24.46 Aligned_cols=32 Identities=22% Similarity=0.220 Sum_probs=19.4
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCEEEEc
Q 014936 99 TPNDVFVTSGCTQAIDVAMALLSRPGANILLP 130 (415)
Q Consensus 99 ~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~ 130 (415)
....++||.+++..=..+.+.|.+.|.+|++.
T Consensus 10 ~~k~~lVTGas~gIG~aia~~la~~G~~V~~~ 41 (286)
T 3uve_A 10 EGKVAFVTGAARGQGRSHAVRLAQEGADIIAV 41 (286)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEE
Confidence 33455666555444445556677788888765
No 317
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0
Probab=26.93 E-value=1.5e+02 Score=24.32 Aligned_cols=68 Identities=9% Similarity=0.025 Sum_probs=34.9
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcC
Q 014936 99 TPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLAD 171 (415)
Q Consensus 99 ~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~ 171 (415)
....+++|.++...=..+...|.+.|.+|++..-.-.............+..+..+. -+.+.+++.++
T Consensus 13 ~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~~~~~~~ 80 (249)
T 3f9i_A 13 TGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNALKDNYTIEVCNL-----ANKEECSNLIS 80 (249)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCSSEEEEECCT-----TSHHHHHHHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhccCccEEEcCC-----CCHHHHHHHHH
Confidence 334555555544433444556667888887765433333334444343444443322 24566665554
No 318
>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*
Probab=26.92 E-value=2.6e+02 Score=22.90 Aligned_cols=65 Identities=15% Similarity=0.061 Sum_probs=33.2
Q ss_pred CcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCC-cchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhc
Q 014936 101 NDVFVTSGCTQAIDVAMALLSRPGANILLPRPGF-PIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLA 170 (415)
Q Consensus 101 ~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~ 170 (415)
..+++|.++...=..+...|.+.|.+|++..-.- ......++..+.++..+..+- -|.+.+++.+
T Consensus 8 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dv-----~~~~~v~~~~ 73 (249)
T 2ew8_A 8 KLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIRNLGRRVLTVKCDV-----SQPGDVEAFG 73 (249)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHTTCCEEEEECCT-----TCHHHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHhcCCcEEEEEeec-----CCHHHHHHHH
Confidence 4456665554444455556667888877653222 222223344565666665432 2455555443
No 319
>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0
Probab=26.61 E-value=2e+02 Score=24.08 Aligned_cols=31 Identities=16% Similarity=0.195 Sum_probs=18.8
Q ss_pred CCcEEEeCChHHHHHHHHHHhcCCCCEEEEc
Q 014936 100 PNDVFVTSGCTQAIDVAMALLSRPGANILLP 130 (415)
Q Consensus 100 ~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~ 130 (415)
...++||.+++..=..+...|.+.|.+|++.
T Consensus 11 ~k~~lVTGas~GIG~a~a~~la~~G~~V~~~ 41 (277)
T 3tsc_A 11 GRVAFITGAARGQGRAHAVRMAAEGADIIAV 41 (277)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred CCEEEEECCccHHHHHHHHHHHHcCCEEEEE
Confidence 3445566555444445555667788888765
No 320
>1mxg_A Alpha amylase; hyperthermostable, family 13 glycosyl hydrola (beta/alpha)8-barrel, hydrolase; HET: ACR ETE; 1.60A {Pyrococcus woesei} SCOP: b.71.1.1 c.1.8.1 PDB: 1mwo_A* 1mxd_A* 3qgv_A*
Probab=26.60 E-value=49 Score=30.56 Aligned_cols=28 Identities=36% Similarity=0.377 Sum_probs=25.5
Q ss_pred HHHHHHHHHHHhhcCcEEEEccccCCcc
Q 014936 192 YQHLQKLAETANKLKTLVIADEVYGHLV 219 (415)
Q Consensus 192 ~~~l~~i~~~~~~~~~~li~De~~~~~~ 219 (415)
.++++++++-|+++|+.||+|-+.-+..
T Consensus 86 ~~df~~lv~~~H~~Gi~VilD~V~NH~~ 113 (435)
T 1mxg_A 86 KEELVRLIQTAHAYGIKVIADVVINHRA 113 (435)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECCSBCC
T ss_pred HHHHHHHHHHHHHCCCEEEEEECccccc
Confidence 4999999999999999999999987654
No 321
>1wjw_A Phosphoacetylglucosamine mutase; carbohydrate metabolism, structural genomics, riken structural genomics/proteomics initiative, RSGI, isomerase; NMR {Mus musculus} SCOP: d.129.2.1
Probab=26.27 E-value=1.8e+02 Score=20.87 Aligned_cols=39 Identities=15% Similarity=0.129 Sum_probs=29.5
Q ss_pred CeEEEcCCCCCCCCeEEEEe-eCChhhHHHHHHHHHHHHHHHH
Q 014936 368 SVIILPGTAVGLKNWLRVTF-AVDPYSLEECLDRIKSFYQRHA 409 (415)
Q Consensus 368 gi~v~~g~~~~~~~~iRi~~-~~~~~~l~~~l~~l~~~~~~~~ 409 (415)
.+.++|... ...||+-+ +.+.+.+++.++.+.+.+++..
T Consensus 58 wvlvRpSGT---EP~irvy~Ea~~~~~~~~~~~~~~~~i~~~~ 97 (112)
T 1wjw_A 58 RAFVRPSGT---EDIVRVYAEANSQESADRLAYEVSLLVFQLA 97 (112)
T ss_dssp EEEEECSSS---SSSEEEEEEESSHHHHHHHHHHHHHHHHHHT
T ss_pred EEEEEeCCC---ccEEEEEEEECCHHHHHHHHHHHHHHHHHHH
Confidence 466777542 67899999 6778888888888888887653
No 322
>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}
Probab=26.23 E-value=2.7e+02 Score=23.98 Aligned_cols=96 Identities=14% Similarity=0.024 Sum_probs=44.9
Q ss_pred CcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCC----------Ccc---hHHHHHhCCCeEEEeeccCCCCCCCChhHHH
Q 014936 101 NDVFVTSGCTQAIDVAMALLSRPGANILLPRPG----------FPI---YELSAAFRHIEVRHFDLLPDKGWEVDLDDIE 167 (415)
Q Consensus 101 ~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~----------y~~---~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~ 167 (415)
..++||.++...=..+...|.+.|.+|++..-. -.. ....+...|.++..+..+. -|.+.++
T Consensus 28 k~vlVTGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv-----~d~~~v~ 102 (322)
T 3qlj_A 28 RVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAVADGSNV-----ADWDQAA 102 (322)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTCEEEEECCCT-----TSHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCcccccccccccHHHHHHHHHHHHhcCCcEEEEECCC-----CCHHHHH
Confidence 344555444333334455566788888775432 111 1223344566666665432 2455555
Q ss_pred hhcCC-----CceEEEecCCC-Cccc--cCCCHHHHHHHHHH
Q 014936 168 SLADQ-----NTVALVIINPG-NPCG--NVYSYQHLQKLAET 201 (415)
Q Consensus 168 ~~~~~-----~~~~v~i~~p~-nptG--~~~~~~~l~~i~~~ 201 (415)
+.++. ...-+++.+.. ...+ .-.+.+++.+..+.
T Consensus 103 ~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~v 144 (322)
T 3qlj_A 103 GLIQTAVETFGGLDVLVNNAGIVRDRMIANTSEEEFDAVIAV 144 (322)
T ss_dssp HHHHHHHHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHH
Confidence 44431 11224444432 2222 12466666666543
No 323
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=26.20 E-value=2.7e+02 Score=22.71 Aligned_cols=65 Identities=17% Similarity=0.092 Sum_probs=34.2
Q ss_pred CcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchH---HHHHhCCCeEEEeeccCCCCCCCChhHHHhhc
Q 014936 101 NDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYE---LSAAFRHIEVRHFDLLPDKGWEVDLDDIESLA 170 (415)
Q Consensus 101 ~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~---~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~ 170 (415)
..++||.++...=..+...|.+.|.+|++..-.-.... ..++..+.++..+..+. -|.+.+++.+
T Consensus 6 k~vlITGas~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~~~~~~ 73 (247)
T 3lyl_A 6 KVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKGFKARGLVLNI-----SDIESIQNFF 73 (247)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCT-----TCHHHHHHHH
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecC-----CCHHHHHHHH
Confidence 44556655544434455566678888876644332222 22334466666666533 2455555443
No 324
>2al1_A Enolase 1, 2-phospho-D-; beta barrel, lyase; HET: PEP 2PG; 1.50A {Saccharomyces cerevisiae} SCOP: c.1.11.1 d.54.1.1 PDB: 1ebg_A 1ebh_A* 1one_A* 2one_A* 1p48_A* 1p43_A* 1l8p_A 4enl_A 1nel_A 1els_A 3enl_A 5enl_A* 6enl_A 7enl_A* 2al2_A* 2al2_B* 2xh7_A* 2xgz_A* 2xh2_A* 2xh4_A* ...
Probab=26.15 E-value=55 Score=30.33 Aligned_cols=92 Identities=12% Similarity=0.051 Sum_probs=55.1
Q ss_pred HHHHHHHHHHhcCCCCEEEEcCCCCcch----HHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCc
Q 014936 110 TQAIDVAMALLSRPGANILLPRPGFPIY----ELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNP 185 (415)
Q Consensus 110 ~~al~~~~~~l~~~gd~vi~~~p~y~~~----~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~np 185 (415)
.+++......+ ++-+-+.+++|....- ..+.+.....+. -++.+-.+++.+++.++.+..-++...++.
T Consensus 276 ~eai~~~~~~l-~~y~i~~iEdPl~~dD~~g~~~l~~~~~ipI~-----gDE~~vt~~~~~~~~i~~~a~d~i~ikv~q- 348 (436)
T 2al1_A 276 PQLADLYHSLM-KRYPIVSIEDPFAEDDWEAWSHFFKTAGIQIV-----ADDLTVTNPKRIATAIEKKAADALLLKVNQ- 348 (436)
T ss_dssp HHHHHHHHHHH-HHSCEEEEECCSCTTCHHHHHHHHTTCCSEEE-----ESTTTTTCHHHHHHHHHTTCCSEEEECHHH-
T ss_pred HHHHHHHHHHH-HhCCcEEEECCCCCcCHHHHHHHHhcCCCeEE-----ECCcccCCHHHHHHHHHhCCCCEEEechhh-
Confidence 44444433333 4556889999987642 222333233322 122222378899988876655556666554
Q ss_pred cccCCCHHHHHHHHHHHhhcCcEEEE
Q 014936 186 CGNVYSYQHLQKLAETANKLKTLVIA 211 (415)
Q Consensus 186 tG~~~~~~~l~~i~~~~~~~~~~li~ 211 (415)
.|.+ .+..+++++|+.+|+.+++
T Consensus 349 iGGi---tea~~ia~lA~~~g~~~~~ 371 (436)
T 2al1_A 349 IGTL---SESIKAAQDSFAAGWGVMV 371 (436)
T ss_dssp HCCH---HHHHHHHHHHHHTTCEEEE
T ss_pred cCCH---HHHHHHHHHHHHcCCeEEE
Confidence 3333 5788999999999997655
No 325
>3n0v_A Formyltetrahydrofolate deformylase; formyl transferase, ACT domain, structural genomics, joint C structural genomics, JCSG; HET: MSE; 2.25A {Pseudomonas putida}
Probab=26.14 E-value=1e+02 Score=26.59 Aligned_cols=114 Identities=14% Similarity=0.135 Sum_probs=59.7
Q ss_pred CcHHHHHHHHHHHhhhCCCC------CCCCcE-EEeCChHHHHHHHHHHhcCC--CCEEEEcCCCCcchHHHHHhCCCeE
Q 014936 78 GLPLTRRAIAEYLSRDLPYK------LTPNDV-FVTSGCTQAIDVAMALLSRP--GANILLPRPGFPIYELSAAFRHIEV 148 (415)
Q Consensus 78 g~~~lr~~ia~~~~~~~~~~------~~~~~i-~i~~g~~~al~~~~~~l~~~--gd~vi~~~p~y~~~~~~~~~~g~~~ 148 (415)
...+|++.+++.-.+ ++.. -.+-+| ++.||..+.+..++...... .-.|...-..+......++..|+.+
T Consensus 63 ~~~~L~~~f~~la~~-l~m~~~l~~~~~~~ri~vl~Sg~g~~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~A~~~gIp~ 141 (286)
T 3n0v_A 63 DEAGFRAGLAERSEA-FGMAFELTAPNHRPKVVIMVSKADHCLNDLLYRQRIGQLGMDVVAVVSNHPDLEPLAHWHKIPY 141 (286)
T ss_dssp CHHHHHHHHHHHHGG-GTCEEEEECTTCCCEEEEEESSCCHHHHHHHHHHHTTSSCCEEEEEEESSSTTHHHHHHTTCCE
T ss_pred CHHHHHHHHHHHHHH-cCCEEEeecCCCCcEEEEEEeCCCCCHHHHHHHHHCCCCCcEEEEEEeCcHHHHHHHHHcCCCE
Confidence 457888888765432 3321 123345 56677777778777765432 1233222222334456789999998
Q ss_pred EEeeccCCCCCCCChhHHHhhcCC-CceEEEecCCCCccccCCCHHHHHH
Q 014936 149 RHFDLLPDKGWEVDLDDIESLADQ-NTVALVIINPGNPCGNVYSYQHLQK 197 (415)
Q Consensus 149 ~~~~~~~~~~~~~~~~~l~~~~~~-~~~~v~i~~p~nptG~~~~~~~l~~ 197 (415)
..+|....+....+ +++.+.+++ ++.++++.. .+.++|.+-+..
T Consensus 142 ~~~~~~~~~r~~~~-~~~~~~l~~~~~Dlivla~----y~~il~~~~l~~ 186 (286)
T 3n0v_A 142 YHFALDPKDKPGQE-RKVLQVIEETGAELVILAR----YMQVLSPELCRR 186 (286)
T ss_dssp EECCCBTTBHHHHH-HHHHHHHHHHTCSEEEESS----CCSCCCHHHHHH
T ss_pred EEeCCCcCCHHHHH-HHHHHHHHhcCCCEEEecc----cccccCHHHHhh
Confidence 88775331110001 123333332 456666654 566777555543
No 326
>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*
Probab=25.88 E-value=2.6e+02 Score=23.29 Aligned_cols=94 Identities=12% Similarity=0.039 Sum_probs=47.3
Q ss_pred cEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCC-----CceE
Q 014936 102 DVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ-----NTVA 176 (415)
Q Consensus 102 ~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~-----~~~~ 176 (415)
.+++|.+++..=..+...|.+.|.+|++..-.-....+. ...+.+...+..+- -|.+++++.++. ...-
T Consensus 4 ~vlVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~-~~~~~~~~~~~~Dv-----~~~~~v~~~v~~~~~~~g~iD 77 (247)
T 3ged_A 4 GVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADF-AKERPNLFYFHGDV-----ADPLTLKKFVEYAMEKLQRID 77 (247)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH-HTTCTTEEEEECCT-----TSHHHHHHHHHHHHHHHSCCC
T ss_pred EEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHhcCCEEEEEecC-----CCHHHHHHHHHHHHHHcCCCC
Confidence 355555554444455556778898887765332222222 33445555555432 244555444321 1222
Q ss_pred EEecCC-CCcccc--CCCHHHHHHHHHH
Q 014936 177 LVIINP-GNPCGN--VYSYQHLQKLAET 201 (415)
Q Consensus 177 v~i~~p-~nptG~--~~~~~~l~~i~~~ 201 (415)
++++|. .++.+. -++.+++.++.++
T Consensus 78 iLVNNAG~~~~~~~~~~~~e~~~~~~~v 105 (247)
T 3ged_A 78 VLVNNACRGSKGILSSLLYEEFDYILSV 105 (247)
T ss_dssp EEEECCCCCCCCGGGTCCHHHHHHHHHH
T ss_pred EEEECCCCCCCCCcccCCHHHHHHHHHH
Confidence 455554 222222 3567778777654
No 327
>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}
Probab=25.84 E-value=1.7e+02 Score=24.53 Aligned_cols=32 Identities=19% Similarity=0.202 Sum_probs=19.1
Q ss_pred CCcEEEeCChHHHHHHHHHHhcCCCCEEEEcC
Q 014936 100 PNDVFVTSGCTQAIDVAMALLSRPGANILLPR 131 (415)
Q Consensus 100 ~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~ 131 (415)
...++||.++...=..+...|.+.|.+|++..
T Consensus 13 gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~ 44 (278)
T 3sx2_A 13 GKVAFITGAARGQGRAHAVRLAADGADIIAVD 44 (278)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCeEEEEe
Confidence 34555665554443445556677888887653
No 328
>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2
Probab=25.68 E-value=2.9e+02 Score=22.99 Aligned_cols=66 Identities=14% Similarity=0.096 Sum_probs=32.9
Q ss_pred CCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHH----HhCCCeEEEeeccCCCCCCCChhHHHhhc
Q 014936 100 PNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSA----AFRHIEVRHFDLLPDKGWEVDLDDIESLA 170 (415)
Q Consensus 100 ~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~----~~~g~~~~~~~~~~~~~~~~~~~~l~~~~ 170 (415)
...++||.++...=..+...|.+.|.+|++..-.-....... ...|.++..+..+. -|.+.+++++
T Consensus 21 ~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl-----~~~~~v~~~~ 90 (267)
T 1vl8_A 21 GRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDV-----SNYEEVKKLL 90 (267)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCT-----TCHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEEcCC-----CCHHHHHHHH
Confidence 345566655444444455566678888876543222222222 22355666555432 2455555544
No 329
>2guy_A Alpha-amylase A; (beta-alpha) 8 barrel, hydrolase; HET: NAG BMA; 1.59A {Aspergillus oryzae} SCOP: b.71.1.1 c.1.8.1 PDB: 2gvy_A* 3kwx_A* 6taa_A 7taa_A* 2taa_A
Probab=25.62 E-value=51 Score=30.81 Aligned_cols=28 Identities=18% Similarity=0.260 Sum_probs=25.6
Q ss_pred HHHHHHHHHHHhhcCcEEEEccccCCcc
Q 014936 192 YQHLQKLAETANKLKTLVIADEVYGHLV 219 (415)
Q Consensus 192 ~~~l~~i~~~~~~~~~~li~De~~~~~~ 219 (415)
.++++++++-|+++|+.||+|-+.-+..
T Consensus 97 ~~df~~lv~~~H~~Gi~VilD~V~NH~~ 124 (478)
T 2guy_A 97 ADDLKALSSALHERGMYLMVDVVANHMG 124 (478)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECCSBCC
T ss_pred HHHHHHHHHHHHHCCCEEEEEECcccCC
Confidence 4999999999999999999999987654
No 330
>1wza_A Alpha-amylase A; hydrolase, halophilic, thermophilic; 1.60A {Halothermothrix orenii} SCOP: b.71.1.1 c.1.8.1
Probab=25.59 E-value=55 Score=30.69 Aligned_cols=28 Identities=29% Similarity=0.311 Sum_probs=25.1
Q ss_pred HHHHHHHHHHHhhcCcEEEEccccCCcc
Q 014936 192 YQHLQKLAETANKLKTLVIADEVYGHLV 219 (415)
Q Consensus 192 ~~~l~~i~~~~~~~~~~li~De~~~~~~ 219 (415)
.++++++++.|+++|+.||+|-++-+..
T Consensus 81 ~~d~~~Lv~~aH~~Gi~VilD~V~NH~s 108 (488)
T 1wza_A 81 LEDFHKLVEAAHQRGIKVIIDLPINHTS 108 (488)
T ss_dssp HHHHHHHHHHHHHTTCEEEEECCCSBCC
T ss_pred HHHHHHHHHHHHHCCCEEEEEecccccc
Confidence 4999999999999999999999986643
No 331
>1gcy_A Glucan 1,4-alpha-maltotetrahydrolase; beta-alpha-barrel, beta sheet; 1.60A {Pseudomonas stutzeri} SCOP: b.71.1.1 c.1.8.1 PDB: 1jdc_A* 1jda_A* 1jdd_A* 1qi5_A* 1qi3_A* 1qi4_A* 2amg_A 1qpk_A*
Probab=25.40 E-value=60 Score=30.86 Aligned_cols=29 Identities=21% Similarity=0.138 Sum_probs=26.0
Q ss_pred HHHHHHHHHHHhhcCcEEEEccccCCccc
Q 014936 192 YQHLQKLAETANKLKTLVIADEVYGHLVF 220 (415)
Q Consensus 192 ~~~l~~i~~~~~~~~~~li~De~~~~~~~ 220 (415)
.++++++++-|+++|+.||+|-++-+...
T Consensus 92 ~~dfk~Lv~~aH~~GI~VilD~V~NHt~~ 120 (527)
T 1gcy_A 92 DAQLRQAASALGGAGVKVLYDVVPNHMNR 120 (527)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECCSBCCT
T ss_pred HHHHHHHHHHHHHCCCEEEEEEeecCcCC
Confidence 49999999999999999999999877553
No 332
>1hvx_A Alpha-amylase; hydrolase, glycosyltransferase, thermostability; 2.00A {Geobacillus stearothermophilus} SCOP: b.71.1.1 c.1.8.1
Probab=25.38 E-value=45 Score=31.63 Aligned_cols=28 Identities=21% Similarity=0.179 Sum_probs=25.6
Q ss_pred HHHHHHHHHHHhhcCcEEEEccccCCcc
Q 014936 192 YQHLQKLAETANKLKTLVIADEVYGHLV 219 (415)
Q Consensus 192 ~~~l~~i~~~~~~~~~~li~De~~~~~~ 219 (415)
.++++++++.|+++|+.||+|-+.-+..
T Consensus 81 ~~dfk~Lv~~aH~~Gi~VilD~V~NH~~ 108 (515)
T 1hvx_A 81 KAQYLQAIQAAHAAGMQVYADVVFDHKG 108 (515)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECCSEEC
T ss_pred HHHHHHHHHHHHHCCCEEEEEEecCCcc
Confidence 4999999999999999999999987754
No 333
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=25.25 E-value=2.7e+02 Score=23.02 Aligned_cols=96 Identities=10% Similarity=0.046 Sum_probs=46.8
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHH---HHHhCCCeEEEeeccCCCCCCCChhHHHhhcCC---
Q 014936 99 TPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYEL---SAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ--- 172 (415)
Q Consensus 99 ~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~---~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~--- 172 (415)
....+++|.++...=..+.+.|.+.|.+|++..-.-..... .+...+.++..+..+- -|.+.+++.++.
T Consensus 11 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv-----~d~~~v~~~~~~~~~ 85 (256)
T 3gaf_A 11 NDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAGGKAIGLECNV-----TDEQHREAVIKAALD 85 (256)
T ss_dssp TTCEEEECSCSSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCT-----TCHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCC-----CCHHHHHHHHHHHHH
Confidence 33445555554443344555666788888776433322222 2334466666666533 245555544431
Q ss_pred ---CceEEEecCCC-C-ccccCCCHHHHHHHHH
Q 014936 173 ---NTVALVIINPG-N-PCGNVYSYQHLQKLAE 200 (415)
Q Consensus 173 ---~~~~v~i~~p~-n-ptG~~~~~~~l~~i~~ 200 (415)
+.. +++.+.. . +.....+.+++.+..+
T Consensus 86 ~~g~id-~lv~nAg~~~~~~~~~~~~~~~~~~~ 117 (256)
T 3gaf_A 86 QFGKIT-VLVNNAGGGGPKPFDMPMSDFEWAFK 117 (256)
T ss_dssp HHSCCC-EEEECCCCCCCCCTTCCHHHHHHHHH
T ss_pred HcCCCC-EEEECCCCCCCCCCCCCHHHHHHHHH
Confidence 223 3444432 1 2112456677666544
No 334
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=25.14 E-value=1.9e+02 Score=24.88 Aligned_cols=54 Identities=13% Similarity=0.142 Sum_probs=28.2
Q ss_pred HHHHHHHHHHHhhhCCCCCCCCcEEEeCC---hHHHHHHHHHHhcCCCCEEEEcCCCCcc
Q 014936 80 PLTRRAIAEYLSRDLPYKLTPNDVFVTSG---CTQAIDVAMALLSRPGANILLPRPGFPI 136 (415)
Q Consensus 80 ~~lr~~ia~~~~~~~~~~~~~~~i~i~~g---~~~al~~~~~~l~~~gd~vi~~~p~y~~ 136 (415)
.+=|+++.+...+.-+ ..--|++..| +.+++..+-.+-.-.-|.|++..|.|..
T Consensus 54 ~~Er~~v~~~~~~~~~---grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y~~ 110 (292)
T 3daq_A 54 TDEKELILKTVIDLVD---KRVPVIAGTGTNDTEKSIQASIQAKALGADAIMLITPYYNK 110 (292)
T ss_dssp HHHHHHHHHHHHHHHT---TSSCEEEECCCSCHHHHHHHHHHHHHHTCSEEEEECCCSSC
T ss_pred HHHHHHHHHHHHHHhC---CCCcEEEeCCcccHHHHHHHHHHHHHcCCCEEEECCCCCCC
Confidence 4445555555543211 1124555443 4566665544432223889888888864
No 335
>1iuk_A Hypothetical protein TT1466; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.70A {Thermus thermophilus} SCOP: c.2.1.8 PDB: 1iul_A
Probab=25.13 E-value=71 Score=24.02 Aligned_cols=21 Identities=14% Similarity=0.175 Sum_probs=17.3
Q ss_pred HHHHHHHhhcCcEEEEccccC
Q 014936 196 QKLAETANKLKTLVIADEVYG 216 (415)
Q Consensus 196 ~~i~~~~~~~~~~li~De~~~ 216 (415)
.++.++|+++|+.++-+.+.+
T Consensus 107 ~~~~~~a~~~Gir~vgpnc~g 127 (140)
T 1iuk_A 107 PEFEKALKEAGIPVVADRCLM 127 (140)
T ss_dssp HHHHHHHHHTTCCEEESCCHH
T ss_pred HHHHHHHHHcCCEEEcCCccc
Confidence 777888889999999887754
No 336
>2dh2_A 4F2 cell-surface antigen heavy chain; TIM-barrel, glycosidase like, antiparallel beta-sheet, greek terminal domain, extracellular domain; 2.10A {Homo sapiens} PDB: 2dh3_A
Probab=25.11 E-value=59 Score=29.92 Aligned_cols=28 Identities=21% Similarity=0.101 Sum_probs=25.5
Q ss_pred HHHHHHHHHHHhhcCcEEEEccccCCcc
Q 014936 192 YQHLQKLAETANKLKTLVIADEVYGHLV 219 (415)
Q Consensus 192 ~~~l~~i~~~~~~~~~~li~De~~~~~~ 219 (415)
.++++++++-|+++|+.||.|-++-+..
T Consensus 81 ~~d~~~lv~~ah~~Gi~vilD~V~NH~s 108 (424)
T 2dh2_A 81 KEDFDSLLQSAKKKSIRVILDLTPNYRG 108 (424)
T ss_dssp HHHHHHHHHHHHHTTCEEEEECCTTTTS
T ss_pred HHHHHHHHHHHHHCCCEEEEEECCCcCC
Confidence 4999999999999999999999987754
No 337
>2kfp_A Pspto_3016 protein; alpha, beta, double-WING, structural genomics, PSI-2, protein structure initiative; NMR {Pseudomonas syringae} PDB: 3h9x_A
Probab=25.10 E-value=85 Score=23.10 Aligned_cols=39 Identities=15% Similarity=0.363 Sum_probs=28.4
Q ss_pred HHHHHhhcCeEEEcCCCCCCCCeEEEEee--CChhhHHHHHHH
Q 014936 360 CFKLAKEESVIILPGTAVGLKNWLRVTFA--VDPYSLEECLDR 400 (415)
Q Consensus 360 ~~~ll~~~gi~v~~g~~~~~~~~iRi~~~--~~~~~l~~~l~~ 400 (415)
...|.+..| +.||-.++..+|+.|.+. .++++|.++++.
T Consensus 71 ~~~Lr~~~~--i~PayhmnK~hWisv~Ld~~v~d~~i~~lI~~ 111 (125)
T 2kfp_A 71 VGSLRKKPG--IYPAYHMNKEHWITVLLNGPLGAKEIHSLIED 111 (125)
T ss_dssp HHHHHHSTT--EEECSSSCSSSEEEEETTTTCCHHHHHHHHHH
T ss_pred HHHHHhCCC--CCccccCCCCCeEEEEcCCCCCHHHHHHHHHH
Confidence 344444556 568888888999999983 677888777764
No 338
>4aie_A Glucan 1,6-alpha-glucosidase; hydrolase, glycoside hydrolase 13; HET: MES GOL; 2.05A {Lactobacillus acidophilus ncfm}
Probab=25.08 E-value=49 Score=31.48 Aligned_cols=27 Identities=19% Similarity=0.293 Sum_probs=24.9
Q ss_pred HHHHHHHHHHHhhcCcEEEEccccCCc
Q 014936 192 YQHLQKLAETANKLKTLVIADEVYGHL 218 (415)
Q Consensus 192 ~~~l~~i~~~~~~~~~~li~De~~~~~ 218 (415)
.++++++++.|+++|+.||.|-++-+.
T Consensus 79 ~~dfk~Lv~~aH~~Gi~VilD~V~NHt 105 (549)
T 4aie_A 79 MADMDELISKAKEHHIKIVMDLVVNHT 105 (549)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECCSBC
T ss_pred HHHHHHHHHHHHHCCCEEEEEECccCC
Confidence 499999999999999999999998764
No 339
>3l5o_A Uncharacterized protein from DUF364 family; RARE metals, siderophores, adenosyl binding site; 2.01A {Desulfitobacterium hafniense}
Probab=25.04 E-value=97 Score=26.46 Aligned_cols=73 Identities=14% Similarity=0.014 Sum_probs=44.4
Q ss_pred CCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHH
Q 014936 123 PGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETA 202 (415)
Q Consensus 123 ~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~ 202 (415)
+|++|.+.- |.++.......+.++..+..+|..+... .+.-+..+ +....+++ ||..+=..-+..|+++|
T Consensus 140 ~g~kV~vIG--~fP~i~~~~~~~~~l~V~E~~p~~g~~p-~~~~~~~l-p~~D~vii------TgstlvN~Tl~~lL~~~ 209 (270)
T 3l5o_A 140 KGKKVGVVG--HFPHLESLLEPICDLSILEWSPEEGDYP-LPASEFIL-PECDYVYI------TCASVVDKTLPRLLELS 209 (270)
T ss_dssp TTSEEEEES--CCTTHHHHHTTTSEEEEEESSCCTTCEE-GGGHHHHG-GGCSEEEE------ETHHHHHTCHHHHHHHT
T ss_pred CCCEEEEEC--CchhHHHHHhcCCCEEEEECCCCCCCCC-hhHHHHhh-ccCCEEEE------EeehhhcCCHHHHHhhC
Confidence 467888775 3356666666788888888877544222 22333344 34556666 34443334489999999
Q ss_pred hhc
Q 014936 203 NKL 205 (415)
Q Consensus 203 ~~~ 205 (415)
+.-
T Consensus 210 ~~a 212 (270)
T 3l5o_A 210 RNA 212 (270)
T ss_dssp TTS
T ss_pred CCC
Confidence 754
No 340
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=25.01 E-value=3e+02 Score=22.95 Aligned_cols=64 Identities=20% Similarity=0.099 Sum_probs=32.4
Q ss_pred cEEEeCChHHHHH-HHHHHhcCCCCEEEEcCCCCcchHH---HHHhCCCeEEEeeccCCCCCCCChhHHHhhc
Q 014936 102 DVFVTSGCTQAID-VAMALLSRPGANILLPRPGFPIYEL---SAAFRHIEVRHFDLLPDKGWEVDLDDIESLA 170 (415)
Q Consensus 102 ~i~i~~g~~~al~-~~~~~l~~~gd~vi~~~p~y~~~~~---~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~ 170 (415)
.+++.+|++.++- .+...|.+.|.+|++..-.-..... .+...|.++..+..+- -|.+.+++.+
T Consensus 5 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv-----~d~~~v~~~~ 72 (264)
T 3tfo_A 5 KVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAGGTALAQVLDV-----TDRHSVAAFA 72 (264)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCEEEEEECCT-----TCHHHHHHHH
T ss_pred CEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEcCC-----CCHHHHHHHH
Confidence 3444444444443 4445566788888776433222222 2233466666665532 2455555443
No 341
>1ud2_A Amylase, alpha-amylase; calcium-free, alkaline, hydrolase; 2.13A {Bacillus SP} SCOP: b.71.1.1 c.1.8.1 PDB: 1ud4_A 1ud5_A 1ud6_A 1ud8_A 1ud3_A
Probab=24.98 E-value=47 Score=31.14 Aligned_cols=28 Identities=18% Similarity=0.177 Sum_probs=25.6
Q ss_pred HHHHHHHHHHHhhcCcEEEEccccCCcc
Q 014936 192 YQHLQKLAETANKLKTLVIADEVYGHLV 219 (415)
Q Consensus 192 ~~~l~~i~~~~~~~~~~li~De~~~~~~ 219 (415)
.++++++++-|+++|+.||+|-++-+..
T Consensus 80 ~~df~~lv~~aH~~Gi~VilD~V~NH~~ 107 (480)
T 1ud2_A 80 KAQLERAIGSLKSNDINVYGDVVMNHKM 107 (480)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECCSEEC
T ss_pred HHHHHHHHHHHHHCCCEEEEEEccCccc
Confidence 4999999999999999999999987754
No 342
>3bh4_A Alpha-amylase; calcium, carbohydrate metabolism, glycosidase, hydrolase, metal-binding, secreted; 1.40A {Bacillus amyloliquefaciens} PDB: 1e43_A 1e3z_A* 1e40_A* 1e3x_A 1vjs_A 1ob0_A 1bli_A 1bpl_B 1bpl_A
Probab=24.97 E-value=47 Score=31.17 Aligned_cols=28 Identities=21% Similarity=0.184 Sum_probs=25.5
Q ss_pred HHHHHHHHHHHhhcCcEEEEccccCCcc
Q 014936 192 YQHLQKLAETANKLKTLVIADEVYGHLV 219 (415)
Q Consensus 192 ~~~l~~i~~~~~~~~~~li~De~~~~~~ 219 (415)
.++++++++.|+++|+.||+|-+.-+..
T Consensus 78 ~~df~~lv~~aH~~Gi~VilD~V~NH~~ 105 (483)
T 3bh4_A 78 KSELQDAIGSLHSRNVQVYGDVVLNHKA 105 (483)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECCSEEC
T ss_pred HHHHHHHHHHHHHCCCEEEEEEccCccc
Confidence 4999999999999999999999987754
No 343
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=24.88 E-value=2.1e+02 Score=23.97 Aligned_cols=95 Identities=13% Similarity=0.061 Sum_probs=45.5
Q ss_pred CcEEEeCChHHHHHHHHHHhcCCCCEEEEcC-CCCcc---hHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCC----
Q 014936 101 NDVFVTSGCTQAIDVAMALLSRPGANILLPR-PGFPI---YELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ---- 172 (415)
Q Consensus 101 ~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~-p~y~~---~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~---- 172 (415)
..++||.++...=..+...|.+.|.+|++.. ..-.. ....+...|.++..+..+- -|.+.+++.++.
T Consensus 19 k~~lVTGas~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv-----~~~~~v~~~~~~~~~~ 93 (270)
T 3is3_A 19 KVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIAIKADI-----RQVPEIVKLFDQAVAH 93 (270)
T ss_dssp CEEEESCTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCT-----TSHHHHHHHHHHHHHH
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCC-----CCHHHHHHHHHHHHHH
Confidence 3455555444333445556677888887632 21111 2223344566777666543 245555554432
Q ss_pred -CceEEEecCC-CCcccc--CCCHHHHHHHHH
Q 014936 173 -NTVALVIINP-GNPCGN--VYSYQHLQKLAE 200 (415)
Q Consensus 173 -~~~~v~i~~p-~nptG~--~~~~~~l~~i~~ 200 (415)
...-+++.+. ..+.+. -.+.+++++..+
T Consensus 94 ~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~ 125 (270)
T 3is3_A 94 FGHLDIAVSNSGVVSFGHLKDVTEEEFDRVFS 125 (270)
T ss_dssp HSCCCEEECCCCCCCCCCGGGCCHHHHHHHHH
T ss_pred cCCCCEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 1222444443 222222 246677766654
No 344
>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2
Probab=24.82 E-value=2.9e+02 Score=22.61 Aligned_cols=31 Identities=16% Similarity=0.304 Sum_probs=18.1
Q ss_pred CcEEEeCChHHHHHHHHHHhcCCCCEEEEcC
Q 014936 101 NDVFVTSGCTQAIDVAMALLSRPGANILLPR 131 (415)
Q Consensus 101 ~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~ 131 (415)
..+++|.++...=..+...|.+.|.+|++..
T Consensus 6 k~vlVTGas~giG~~ia~~l~~~G~~V~~~~ 36 (245)
T 1uls_A 6 KAVLITGAAHGIGRATLELFAKEGARLVACD 36 (245)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEe
Confidence 3456665544433444555667788887653
No 345
>2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A*
Probab=24.81 E-value=1e+02 Score=23.20 Aligned_cols=21 Identities=10% Similarity=0.262 Sum_probs=16.7
Q ss_pred HHHHHHHhhcCcEEEEccccC
Q 014936 196 QKLAETANKLKTLVIADEVYG 216 (415)
Q Consensus 196 ~~i~~~~~~~~~~li~De~~~ 216 (415)
.++.+.|+++|+.++-+.+..
T Consensus 114 ~~l~~~a~~~Gi~vvGpnc~g 134 (144)
T 2d59_A 114 REASKKADEAGLIIVANRCMM 134 (144)
T ss_dssp HHHHHHHHHTTCEEEESCCHH
T ss_pred HHHHHHHHHcCCEEEcCCchh
Confidence 677788889999988777654
No 346
>2z1k_A (NEO)pullulanase; hydrolase, structural genomics, NPPSFA, national project on structural and functional analyses; HET: GLC; 2.30A {Thermus thermophilus}
Probab=24.75 E-value=55 Score=30.58 Aligned_cols=28 Identities=32% Similarity=0.363 Sum_probs=25.2
Q ss_pred HHHHHHHHHHHhhcCcEEEEccccCCcc
Q 014936 192 YQHLQKLAETANKLKTLVIADEVYGHLV 219 (415)
Q Consensus 192 ~~~l~~i~~~~~~~~~~li~De~~~~~~ 219 (415)
.++++++++.|+++|+.||+|-++-+..
T Consensus 96 ~~df~~lv~~~h~~Gi~VilD~V~NH~~ 123 (475)
T 2z1k_A 96 NEALRHLLEVAHAHGVRVILDGVFNHTG 123 (475)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECCSBCC
T ss_pred HHHHHHHHHHHHHCCCEEEEEEeccccc
Confidence 4999999999999999999999987644
No 347
>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A
Probab=24.62 E-value=2.8e+02 Score=23.09 Aligned_cols=68 Identities=9% Similarity=0.019 Sum_probs=35.5
Q ss_pred CCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcc----hHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhc
Q 014936 98 LTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPI----YELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLA 170 (415)
Q Consensus 98 ~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~----~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~ 170 (415)
.....++||.++...=..+...|.+.|.+|++..-.-.. ........+.++..+..+. -|.+.+++.+
T Consensus 27 l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~v~~~~ 98 (271)
T 4iin_A 27 FTGKNVLITGASKGIGAEIAKTLASMGLKVWINYRSNAEVADALKNELEEKGYKAAVIKFDA-----ASESDFIEAI 98 (271)
T ss_dssp CSCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCT-----TCHHHHHHHH
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCC-----CCHHHHHHHH
Confidence 344456666655444445556667788887765432211 2223344566666666543 2455554444
No 348
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=24.60 E-value=3.1e+02 Score=23.35 Aligned_cols=95 Identities=19% Similarity=0.194 Sum_probs=46.7
Q ss_pred CCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHH---HHhCCCeEEEeeccCCCCCCCChhHHHhhcCC----
Q 014936 100 PNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELS---AAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ---- 172 (415)
Q Consensus 100 ~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~---~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~---- 172 (415)
...++||.+++..=..+...|.+.|.+|++..-.-...... +...+.++..+..+. -|.+.+++.++.
T Consensus 31 gk~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv-----~d~~~v~~~~~~~~~~ 105 (301)
T 3tjr_A 31 GRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGFDAHGVVCDV-----RHLDEMVRLADEAFRL 105 (301)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCT-----TCHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEEccC-----CCHHHHHHHHHHHHHh
Confidence 34556665554433445556667888887764433322222 233466666665533 245555544431
Q ss_pred --CceEEEecCCC-Ccccc--CCCHHHHHHHHH
Q 014936 173 --NTVALVIINPG-NPCGN--VYSYQHLQKLAE 200 (415)
Q Consensus 173 --~~~~v~i~~p~-nptG~--~~~~~~l~~i~~ 200 (415)
... +++.+.. ...+. ..+.+++.+..+
T Consensus 106 ~g~id-~lvnnAg~~~~~~~~~~~~~~~~~~~~ 137 (301)
T 3tjr_A 106 LGGVD-VVFSNAGIVVAGPLAQMNHDDWRWVID 137 (301)
T ss_dssp HSSCS-EEEECCCCCCCBCGGGCCHHHHHHHHH
T ss_pred CCCCC-EEEECCCcCCCCCcccCCHHHHHHHHH
Confidence 223 3444432 22222 246666666554
No 349
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0
Probab=24.54 E-value=2.3e+02 Score=23.83 Aligned_cols=32 Identities=19% Similarity=0.174 Sum_probs=19.0
Q ss_pred CCcEEEeCChHHHHHHHHHHhcCCCCEEEEcC
Q 014936 100 PNDVFVTSGCTQAIDVAMALLSRPGANILLPR 131 (415)
Q Consensus 100 ~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~ 131 (415)
...++||.++...=..+.+.|.+.|.+|++..
T Consensus 15 gk~~lVTGas~gIG~a~a~~la~~G~~V~~~~ 46 (280)
T 3pgx_A 15 GRVAFITGAARGQGRSHAVRLAAEGADIIACD 46 (280)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEe
Confidence 34455665554443445556667888887753
No 350
>2aaa_A Alpha-amylase; glycosidase; 2.10A {Aspergillus niger} SCOP: b.71.1.1 c.1.8.1
Probab=24.52 E-value=64 Score=30.23 Aligned_cols=29 Identities=17% Similarity=0.321 Sum_probs=26.0
Q ss_pred HHHHHHHHHHHhhcCcEEEEccccCCccc
Q 014936 192 YQHLQKLAETANKLKTLVIADEVYGHLVF 220 (415)
Q Consensus 192 ~~~l~~i~~~~~~~~~~li~De~~~~~~~ 220 (415)
.++++++++.|+++|+.||+|-++-+...
T Consensus 97 ~~df~~lv~~~H~~Gi~VilD~V~NH~~~ 125 (484)
T 2aaa_A 97 ADNLKSLSDALHARGMYLMVDVVPDHMGY 125 (484)
T ss_dssp HHHHHHHHHHHHTTTCEEEEEECCSBCCB
T ss_pred HHHHHHHHHHHHHCCCEEEEEECcCCcCC
Confidence 49999999999999999999999877553
No 351
>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}
Probab=24.51 E-value=3.6e+02 Score=23.67 Aligned_cols=65 Identities=14% Similarity=0.014 Sum_probs=34.4
Q ss_pred CcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCc----------chHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhc
Q 014936 101 NDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFP----------IYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLA 170 (415)
Q Consensus 101 ~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~----------~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~ 170 (415)
..++||.++...=..+...|.+.|.+|++..-.-. .........|.++..+..+- -|.+.+++.+
T Consensus 46 k~vlVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g~~~~~~~~Dv-----~d~~~v~~~~ 120 (346)
T 3kvo_A 46 CTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCIVDV-----RDEQQISAAV 120 (346)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHTTCEEEEEECCT-----TCHHHHHHHH
T ss_pred CEEEEeCCChHHHHHHHHHHHHCCCEEEEEECChhhhhhhHHHHHHHHHHHHhcCCeEEEEEccC-----CCHHHHHHHH
Confidence 34555555444334455567788888776532222 12233455677777776543 2455555544
No 352
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=24.50 E-value=2.7e+02 Score=22.18 Aligned_cols=70 Identities=6% Similarity=-0.024 Sum_probs=35.8
Q ss_pred CcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEec
Q 014936 101 NDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVII 180 (415)
Q Consensus 101 ~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~ 180 (415)
..|++|.++...=..++..|.+.|.+|++..-.-... ......+..+..+. .|.+.++++++. ...|+.+
T Consensus 5 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~----~~~~~~~~~~~~Dl-----~d~~~~~~~~~~-~d~vi~~ 74 (227)
T 3dhn_A 5 KKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKI----KIENEHLKVKKADV-----SSLDEVCEVCKG-ADAVISA 74 (227)
T ss_dssp CEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGGGC----CCCCTTEEEECCCT-----TCHHHHHHHHTT-CSEEEEC
T ss_pred CEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcccc----hhccCceEEEEecC-----CCHHHHHHHhcC-CCEEEEe
Confidence 3577776644444455666667787776654322111 11112333333221 367888888764 3444443
No 353
>3qtp_A Enolase 1; glycolysis, lyase; HET: 2PG; 1.90A {Entamoeba histolytica}
Probab=24.37 E-value=2e+02 Score=26.54 Aligned_cols=94 Identities=13% Similarity=0.059 Sum_probs=58.0
Q ss_pred hHHHHHHHHHHhcCCCCEEEEcCCCCc----chHHHHHhCC-CeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCC
Q 014936 109 CTQAIDVAMALLSRPGANILLPRPGFP----IYELSAAFRH-IEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPG 183 (415)
Q Consensus 109 ~~~al~~~~~~l~~~gd~vi~~~p~y~----~~~~~~~~~g-~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~ 183 (415)
..+.+..... ++++-+-+.+++|... .+..+.+..| +.+.- ++-+--+++.+++.++.+..-+++..++
T Consensus 281 ~~elid~y~~-lle~ypI~~IEDPl~~dD~eg~a~Lt~~lg~i~IvG-----DEl~vTn~~~i~~~Ie~~a~n~IlIKvn 354 (441)
T 3qtp_A 281 VDGLIAEYVD-YGKHYPIASIEDPFAEDDWAAWNKFTVEHGNFQIVG-----DDLLVTNPARVQMAMDKNACNSVLIKVN 354 (441)
T ss_dssp HHHHHHHHHH-HHHHSCEEEEESCSCTTCHHHHHHHHHHTTTSEEEE-----STTTTTCHHHHHHHHHHTCCSEEEECGG
T ss_pred HHHHHHHHHH-HhhhcceeeecCCCChHHHHHHHHHHHhcCCceEEe-----ccccccCHHHHHHHHHcCCCCEEEeccc
Confidence 3555554443 3345568888888865 3445555666 33321 1222346888888886654445566655
Q ss_pred CccccCCCHHHHHHHHHHHhhcCcEEEEc
Q 014936 184 NPCGNVYSYQHLQKLAETANKLKTLVIAD 212 (415)
Q Consensus 184 nptG~~~~~~~l~~i~~~~~~~~~~li~D 212 (415)
. .|.+ .+..+++++|+.+|+.+++=
T Consensus 355 q-iGGI---TEalkaa~lA~~~G~~vmvs 379 (441)
T 3qtp_A 355 Q-IGTL---TETFKTIKMAQEKGWGVMAS 379 (441)
T ss_dssp G-TCCH---HHHHHHHHHHHHTTCEEEEE
T ss_pred c-cccH---HHHHHHHHHHHHcCCeEEEe
Confidence 4 3333 68899999999999887653
No 354
>1wzl_A Alpha-amylase II; pullulan, GH-13, alpha-amylase family, hydrolase; 2.00A {Thermoactinomyces vulgaris} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1ji2_A 1bvz_A 1vfk_A* 3a6o_A* 1wzm_A 1jf6_A 1wzk_A 2d2o_A* 1jib_A* 1jl8_A* 1vb9_A* 1g1y_A* 1vfo_A* 1vfm_A* 1vfu_A* 1jf5_A
Probab=24.26 E-value=55 Score=31.63 Aligned_cols=29 Identities=21% Similarity=0.394 Sum_probs=26.1
Q ss_pred CHHHHHHHHHHHhhcCcEEEEccccCCcc
Q 014936 191 SYQHLQKLAETANKLKTLVIADEVYGHLV 219 (415)
Q Consensus 191 ~~~~l~~i~~~~~~~~~~li~De~~~~~~ 219 (415)
+.++++++++-|+++|+-||+|-++.+..
T Consensus 218 t~~dfk~lv~~~H~~Gi~VilD~V~NH~~ 246 (585)
T 1wzl_A 218 DLPTFRRLVDEAHRRGIKIILDAVFNHAG 246 (585)
T ss_dssp CHHHHHHHHHHHHTTTCEEEEEECCSBCC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEcCCcCC
Confidence 56999999999999999999999887654
No 355
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=24.24 E-value=2.8e+02 Score=24.11 Aligned_cols=54 Identities=6% Similarity=0.037 Sum_probs=29.6
Q ss_pred HHHHHHHHHHHhhhCCCCCCCCcEEEeCC---hHHHHHHHHHHhcCCCCEEEEcCCCCcc
Q 014936 80 PLTRRAIAEYLSRDLPYKLTPNDVFVTSG---CTQAIDVAMALLSRPGANILLPRPGFPI 136 (415)
Q Consensus 80 ~~lr~~ia~~~~~~~~~~~~~~~i~i~~g---~~~al~~~~~~l~~~gd~vi~~~p~y~~ 136 (415)
.+=|+++.+...+.-+ ..--|++..| +.+++..+-.+-.-.-|.|++..|.|..
T Consensus 76 ~~Er~~v~~~~v~~~~---grvpViaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y~~ 132 (315)
T 3na8_A 76 DPEWDEVVDFTLKTVA---HRVPTIVSVSDLTTAKTVRRAQFAESLGAEAVMVLPISYWK 132 (315)
T ss_dssp HHHHHHHHHHHHHHHT---TSSCBEEECCCSSHHHHHHHHHHHHHTTCSEEEECCCCSSC
T ss_pred HHHHHHHHHHHHHHhC---CCCcEEEecCCCCHHHHHHHHHHHHhcCCCEEEECCCCCCC
Confidence 4555555555543211 1123555444 4566665554443334899999998864
No 356
>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}
Probab=24.21 E-value=2.4e+02 Score=23.63 Aligned_cols=64 Identities=14% Similarity=0.140 Sum_probs=33.9
Q ss_pred cEEEeCChHHHHH-HHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhc
Q 014936 102 DVFVTSGCTQAID-VAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLA 170 (415)
Q Consensus 102 ~i~i~~g~~~al~-~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~ 170 (415)
.+++.+|++.++- .+...|.+.|.+|++..-.-..........+.++..+..+- -|.+.+++.+
T Consensus 29 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv-----~d~~~v~~~~ 93 (272)
T 4dyv_A 29 KIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEIGDDALCVPTDV-----TDPDSVRALF 93 (272)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTSCCEEEECCT-----TSHHHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCCeEEEEecC-----CCHHHHHHHH
Confidence 4555555555444 44455667888887765433333444444455555555432 2455555444
No 357
>1ua7_A Alpha-amylase; beta-alpha-barrels, acarbose, greek-KEY motif, hydrolase; HET: ACI GLD GLC G6D BGC; 2.21A {Bacillus subtilis} SCOP: b.71.1.1 c.1.8.1 PDB: 1bag_A* 3dc0_A
Probab=24.19 E-value=58 Score=29.88 Aligned_cols=29 Identities=28% Similarity=0.423 Sum_probs=26.0
Q ss_pred HHHHHHHHHHHhhcCcEEEEccccCCccc
Q 014936 192 YQHLQKLAETANKLKTLVIADEVYGHLVF 220 (415)
Q Consensus 192 ~~~l~~i~~~~~~~~~~li~De~~~~~~~ 220 (415)
.++++++++.|+++|+.||+|-++-+...
T Consensus 74 ~~d~~~lv~~~h~~Gi~VilD~V~NH~~~ 102 (422)
T 1ua7_A 74 EQEFKEMCAAAEEYGIKVIVDAVINHTTF 102 (422)
T ss_dssp HHHHHHHHHHHHTTTCEEEEEECCSBCCS
T ss_pred HHHHHHHHHHHHHCCCEEEEEeccCcccC
Confidence 49999999999999999999999887553
No 358
>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}
Probab=24.07 E-value=3e+02 Score=22.66 Aligned_cols=32 Identities=19% Similarity=0.265 Sum_probs=18.8
Q ss_pred CCcEEEeCChHHHHHHHHHHhcCCCCEEEEcC
Q 014936 100 PNDVFVTSGCTQAIDVAMALLSRPGANILLPR 131 (415)
Q Consensus 100 ~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~ 131 (415)
...++||.++...=..+...|.+.|.+|++..
T Consensus 12 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~ 43 (263)
T 3ak4_A 12 GRKAIVTGGSKGIGAAIARALDKAGATVAIAD 43 (263)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEe
Confidence 34556665554433445555667888887653
No 359
>1wpc_A Glucan 1,4-alpha-maltohexaosidase; maltohexaose-producing amylase, alpha-amylase, acarbose, HYD; HET: ACI GLC GAL; 1.90A {Bacillus SP} SCOP: b.71.1.1 c.1.8.1 PDB: 1wp6_A* 2d3l_A* 2d3n_A* 2die_A 2gjp_A* 2gjr_A 1w9x_A*
Probab=24.06 E-value=50 Score=31.00 Aligned_cols=28 Identities=21% Similarity=0.127 Sum_probs=25.4
Q ss_pred HHHHHHHHHHHhhcCcEEEEccccCCcc
Q 014936 192 YQHLQKLAETANKLKTLVIADEVYGHLV 219 (415)
Q Consensus 192 ~~~l~~i~~~~~~~~~~li~De~~~~~~ 219 (415)
.++++++++.|+++|+.||+|-+.-+..
T Consensus 82 ~~df~~Lv~~aH~~Gi~VilD~V~NH~~ 109 (485)
T 1wpc_A 82 RSQLQAAVTSLKNNGIQVYGDVVMNHKG 109 (485)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECCSEEC
T ss_pred HHHHHHHHHHHHHCCCEEEEEEeccccC
Confidence 4999999999999999999999987754
No 360
>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*
Probab=23.96 E-value=3.2e+02 Score=22.86 Aligned_cols=94 Identities=13% Similarity=0.123 Sum_probs=45.7
Q ss_pred CcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHH----HhCCCeEEEeeccCCCCCCCChhHHHhhcCC----
Q 014936 101 NDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSA----AFRHIEVRHFDLLPDKGWEVDLDDIESLADQ---- 172 (415)
Q Consensus 101 ~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~----~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~---- 172 (415)
..++||.++...=..+...|.+.|.+|++..-.-....... ...|.++..+..+. -|.+.+++.++.
T Consensus 28 k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv-----~~~~~v~~~~~~~~~~ 102 (277)
T 4fc7_A 28 KVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATGRRCLPLSMDV-----RAPPAVMAAVDQALKE 102 (277)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCT-----TCHHHHHHHHHHHHHH
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEcCC-----CCHHHHHHHHHHHHHH
Confidence 44555555544444555667788988877643332222222 22366666665533 245555544431
Q ss_pred --CceEEEecCCC-Cccc--cCCCHHHHHHHHH
Q 014936 173 --NTVALVIINPG-NPCG--NVYSYQHLQKLAE 200 (415)
Q Consensus 173 --~~~~v~i~~p~-nptG--~~~~~~~l~~i~~ 200 (415)
+.. +++.+.. ...+ ..++.+++.+..+
T Consensus 103 ~g~id-~lv~nAg~~~~~~~~~~~~~~~~~~~~ 134 (277)
T 4fc7_A 103 FGRID-ILINCAAGNFLCPAGALSFNAFKTVMD 134 (277)
T ss_dssp HSCCC-EEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred cCCCC-EEEECCcCCCCCCcccCCHHHHHHHHH
Confidence 223 3444432 1111 1246666666554
No 361
>3faw_A Reticulocyte binding protein; TIM barrel, beta barrel, hydrolase, cell WALL, peptidoglycan-anchor, secreted; 2.10A {Streptococcus agalactiae COH1} PDB: 3fax_A*
Probab=23.79 E-value=49 Score=33.80 Aligned_cols=28 Identities=32% Similarity=0.368 Sum_probs=25.3
Q ss_pred HHHHHHHHHHHhhcCcEEEEccccCCcc
Q 014936 192 YQHLQKLAETANKLKTLVIADEVYGHLV 219 (415)
Q Consensus 192 ~~~l~~i~~~~~~~~~~li~De~~~~~~ 219 (415)
.++++++++-|+++|+-||+|-++-+..
T Consensus 369 ~~efk~lV~~~H~~GI~VILDvV~NH~a 396 (877)
T 3faw_A 369 IAELKQLIHDIHKRGMGVILDVVYNHTA 396 (877)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECTTCCS
T ss_pred HHHHHHHHHHHHHcCCEEEEEEeecccc
Confidence 4999999999999999999999987644
No 362
>1ea9_C Cyclomaltodextrinase; hydrolase, glycosidase; 3.2A {Bacillus SP} SCOP: b.1.18.2 b.71.1.1 c.1.8.1
Probab=23.77 E-value=86 Score=30.23 Aligned_cols=29 Identities=24% Similarity=0.337 Sum_probs=26.3
Q ss_pred CHHHHHHHHHHHhhcCcEEEEccccCCcc
Q 014936 191 SYQHLQKLAETANKLKTLVIADEVYGHLV 219 (415)
Q Consensus 191 ~~~~l~~i~~~~~~~~~~li~De~~~~~~ 219 (415)
+.++++++++-|+++|+-||+|-++.+..
T Consensus 217 t~~df~~lv~~~H~~Gi~VilD~V~NH~~ 245 (583)
T 1ea9_C 217 DKDTLKKLVDLCHERGIRVLLDAVFNHSG 245 (583)
T ss_dssp CHHHHHHHHHHHTTTTCEEEEECCCSBCC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEccccCC
Confidence 56999999999999999999999987754
No 363
>1vb5_A Translation initiation factor EIF-2B; 2.20A {Pyrococcus horikoshii} SCOP: c.124.1.5
Probab=23.66 E-value=3.4e+02 Score=23.07 Aligned_cols=117 Identities=12% Similarity=0.098 Sum_probs=56.0
Q ss_pred HHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcC--CCCEEEEc--CCCCcchH--HHHHhCCCeEEEeec
Q 014936 80 PLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSR--PGANILLP--RPGFPIYE--LSAAFRHIEVRHFDL 153 (415)
Q Consensus 80 ~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~--~gd~vi~~--~p~y~~~~--~~~~~~g~~~~~~~~ 153 (415)
.+.++.|+++-.... .....++|.+.+.....+++.+.+ +.-+|++. .|.+.+.. ..+...|+++..+.-
T Consensus 93 ~~~~~~Ia~~a~~~I----~~g~~IlT~~~s~Tv~~~l~~a~~~~~~~~V~v~etrP~~qG~~~a~~L~~~gI~vtli~d 168 (276)
T 1vb5_A 93 EEAKRELASIGAQLI----DDGDVIITHSFSSTVLEIIRTAKERKKRFKVILTESSPDYEGLHLARELEFSGIEFEVITD 168 (276)
T ss_dssp HHHHHHHHHHHHHHC----CTTEEEECCSCCHHHHHHHHHHHHTTCCEEEEEECCTTTTHHHHHHHHHHHTTCCEEEECG
T ss_pred HHHHHHHHHHHHHHc----cCCCEEEEeCCChHHHHHHHHHHHcCCeEEEEEeCCCcchhhHHHHHHHHHCCCCEEEEcH
Confidence 345556666554432 345667765544444445555533 33467763 46665521 223346888777641
Q ss_pred cCCCCCCCChhHHHhhcCCCceEEEec-CCCCccccCCCHHHHHHHHHHHhhcCcEEEE
Q 014936 154 LPDKGWEVDLDDIESLADQNTVALVII-NPGNPCGNVYSYQHLQKLAETANKLKTLVIA 211 (415)
Q Consensus 154 ~~~~~~~~~~~~l~~~~~~~~~~v~i~-~p~nptG~~~~~~~l~~i~~~~~~~~~~li~ 211 (415)
..+-..++ +...+++. +.-...|-+..+---..++..|+.+++++++
T Consensus 169 ----------sa~~~~m~-~vd~vivGAd~i~~nG~v~nkiGt~~iA~~A~~~~vp~~V 216 (276)
T 1vb5_A 169 ----------AQMGLFCR-EASIAIVGADMITKDGYVVNKAGTYLLALACHENAIPFYV 216 (276)
T ss_dssp ----------GGHHHHHT-TCSEEEECCSEECTTSCEEEETTHHHHHHHHHHTTCCEEE
T ss_pred ----------HHHHHHHc-cCCEEEEcccEEecCCCEeechhHHHHHHHHHHcCCCEEE
Confidence 11111232 22233322 2211223332222335667777888887765
No 364
>2vt1_B Surface presentation of antigens protein SPAS; specificity switch, virulence, transmembrane, inner membrane, FLHB, YSCU, T3SS, plasmid; 2.00A {Shigella flexneri} SCOP: d.367.1.1
Probab=23.62 E-value=45 Score=23.21 Aligned_cols=24 Identities=17% Similarity=0.113 Sum_probs=19.6
Q ss_pred HHHHHHHHHHhhcCcEEEEccccC
Q 014936 193 QHLQKLAETANKLKTLVIADEVYG 216 (415)
Q Consensus 193 ~~l~~i~~~~~~~~~~li~De~~~ 216 (415)
.--.+|.++++++|++++.|..-+
T Consensus 27 ~~A~~I~e~A~e~gVPi~e~~~LA 50 (93)
T 2vt1_B 27 QCALAVRKYANEVGIPTVRDVKLA 50 (93)
T ss_dssp HHHHHHHHHHHHTTCCEEECHHHH
T ss_pred HHHHHHHHHHHHcCCCEEECHHHH
Confidence 446888999999999999996544
No 365
>1j0h_A Neopullulanase; beta-alpha-barrels, hydrolase; 1.90A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1j0i_A* 1j0j_A* 1j0k_A* 1sma_A 1gvi_A*
Probab=23.34 E-value=59 Score=31.44 Aligned_cols=29 Identities=21% Similarity=0.318 Sum_probs=26.2
Q ss_pred CHHHHHHHHHHHhhcCcEEEEccccCCcc
Q 014936 191 SYQHLQKLAETANKLKTLVIADEVYGHLV 219 (415)
Q Consensus 191 ~~~~l~~i~~~~~~~~~~li~De~~~~~~ 219 (415)
+.++++++++.|+++|+-||+|-++.+..
T Consensus 221 t~~df~~lv~~~H~~Gi~VilD~V~NH~~ 249 (588)
T 1j0h_A 221 DKETLKTLIDRCHEKGIRVMLDAVFNHCG 249 (588)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCSBCC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEECcCcCc
Confidence 35999999999999999999999987754
No 366
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=23.32 E-value=3.2e+02 Score=22.59 Aligned_cols=65 Identities=15% Similarity=0.039 Sum_probs=33.2
Q ss_pred CcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHH---HHHhCCCeEEEeeccCCCCCCCChhHHHhhc
Q 014936 101 NDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYEL---SAAFRHIEVRHFDLLPDKGWEVDLDDIESLA 170 (415)
Q Consensus 101 ~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~---~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~ 170 (415)
..++||.|+...=..+...|.+.|.+|++..-.-..... .+...+.++..+..+. -|.+.+++.+
T Consensus 30 k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~v~~~~ 97 (262)
T 3rkr_A 30 QVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAGGEAESHACDL-----SHSDAIAAFA 97 (262)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCT-----TCHHHHHHHH
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCceeEEEecC-----CCHHHHHHHH
Confidence 345555554433334445566778888776433332222 2234466766666533 2455555444
No 367
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=23.30 E-value=2.7e+02 Score=23.29 Aligned_cols=99 Identities=13% Similarity=0.081 Sum_probs=48.3
Q ss_pred CCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEc-CCCCcc---hHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCC-
Q 014936 98 LTPNDVFVTSGCTQAIDVAMALLSRPGANILLP-RPGFPI---YELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ- 172 (415)
Q Consensus 98 ~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~-~p~y~~---~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~- 172 (415)
.....++||.++...=..+.+.|.+.|.+|++. ...-.. ....+...|.++..+..+. -|.+.+++.++.
T Consensus 29 l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv-----~d~~~v~~~~~~~ 103 (271)
T 3v2g_A 29 LAGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAGGRAVAIRADN-----RDAEAIEQAIRET 103 (271)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCT-----TCHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEECCC-----CCHHHHHHHHHHH
Confidence 344456666555444445555677788888765 222111 1222344566776666543 255555554432
Q ss_pred ----CceEEEecCCC-Cccc--cCCCHHHHHHHHHH
Q 014936 173 ----NTVALVIINPG-NPCG--NVYSYQHLQKLAET 201 (415)
Q Consensus 173 ----~~~~v~i~~p~-nptG--~~~~~~~l~~i~~~ 201 (415)
...-+++.+.. ...+ .-.+.+++.+..+.
T Consensus 104 ~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~v 139 (271)
T 3v2g_A 104 VEALGGLDILVNSAGIWHSAPLEETTVADFDEVMAV 139 (271)
T ss_dssp HHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred HHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHH
Confidence 12223444432 1111 12466777766553
No 368
>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*
Probab=23.26 E-value=3e+02 Score=22.37 Aligned_cols=67 Identities=13% Similarity=-0.006 Sum_probs=32.9
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeE-EEeeccCCCCCCCChhHHHhhc
Q 014936 99 TPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEV-RHFDLLPDKGWEVDLDDIESLA 170 (415)
Q Consensus 99 ~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~l~~~~ 170 (415)
....+++|.++...=..+...|.+.|.+|++..-.-..........+.++ ..+..+. -|.+.+++.+
T Consensus 10 ~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~~~~~~ 77 (254)
T 2wsb_A 10 DGACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQELGAAVAARIVADV-----TDAEAMTAAA 77 (254)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEEECCT-----TCHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcccceeEEEEec-----CCHHHHHHHH
Confidence 33456666555443345555666778887765432222222333334444 4444322 2556665544
No 369
>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2
Probab=23.04 E-value=3.1e+02 Score=22.79 Aligned_cols=65 Identities=17% Similarity=0.143 Sum_probs=32.6
Q ss_pred CcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhc
Q 014936 101 NDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLA 170 (415)
Q Consensus 101 ~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~ 170 (415)
..+++|.++...=..+...|.+.|.+|++..-.-..........+.++..+..+- -|.+.+++.+
T Consensus 7 k~vlITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~v~~~~ 71 (263)
T 2a4k_A 7 KTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALEAEAIAVVADV-----SDPKAVEAVF 71 (263)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCCSSEEEEECCT-----TSHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCceEEEEcCC-----CCHHHHHHHH
Confidence 4456665544443445555667788887654332223333343444455554432 2455555544
No 370
>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*
Probab=23.03 E-value=3.2e+02 Score=22.57 Aligned_cols=31 Identities=13% Similarity=0.208 Sum_probs=18.0
Q ss_pred CcEEEeCChHHHHHHHHHHhcCCCCEEEEcC
Q 014936 101 NDVFVTSGCTQAIDVAMALLSRPGANILLPR 131 (415)
Q Consensus 101 ~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~ 131 (415)
..+++|.++...=..+...|.+.|.+|++..
T Consensus 8 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~ 38 (260)
T 1nff_A 8 KVALVSGGARGMGASHVRAMVAEGAKVVFGD 38 (260)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEe
Confidence 4456665544433445555667788887653
No 371
>3dmy_A Protein FDRA; predicted actyl-COA synthetase, nysgrc, PSI-II, STRU genomics, protein structure initiative; 2.07A {Escherichia coli}
Probab=22.94 E-value=73 Score=29.87 Aligned_cols=74 Identities=8% Similarity=0.073 Sum_probs=47.2
Q ss_pred cCCCCcchHHHHHhC-CCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcE
Q 014936 130 PRPGFPIYELSAAFR-HIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTL 208 (415)
Q Consensus 130 ~~p~y~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~ 208 (415)
.-|.|.+|......- ..+...+-+.+. .-.+.++++.+...++ ++..-+.| .++..++.+.|+++|+.
T Consensus 20 ~~Pv~~~~~~~~~~p~~~DlavI~vPa~----~v~~~v~e~~~~Gv~~-viis~Gf~------~~~~~~l~~~A~~~g~r 88 (480)
T 3dmy_A 20 ALTQVRRWDSACQKLPDANLALISVAGE----YAAELANQALDRNLNV-MMFSDNVT------LEDEIQLKTRAREKGLL 88 (480)
T ss_dssp CCEEESSHHHHHHHSTTCCEEEECSCHH----HHHHHHHHHHHTTCEE-EECCCCCC------HHHHHHHHHHHHHTTCC
T ss_pred CCcccchHHHHHhcCCCCCEEEEecCHH----HHHHHHHHHHhcCCCE-EEECCCCC------HHHHHHHHHHHHHcCCE
Confidence 356677777776654 455555443221 2456677777667774 44332222 57778999999999999
Q ss_pred EEEccc
Q 014936 209 VIADEV 214 (415)
Q Consensus 209 li~De~ 214 (415)
++==++
T Consensus 89 liGPNc 94 (480)
T 3dmy_A 89 VMGPDC 94 (480)
T ss_dssp EECSSC
T ss_pred EEecCc
Confidence 886555
No 372
>1jae_A Alpha-amylase; glycosidase, carbohydrate metabolism, 4-glucan-4-glucanohydrolase, hydrolase; 1.65A {Tenebrio molitor} SCOP: b.71.1.1 c.1.8.1 PDB: 1clv_A 1tmq_A 1viw_A*
Probab=22.78 E-value=53 Score=30.67 Aligned_cols=29 Identities=14% Similarity=0.197 Sum_probs=25.9
Q ss_pred HHHHHHHHHHHhhcCcEEEEccccCCccc
Q 014936 192 YQHLQKLAETANKLKTLVIADEVYGHLVF 220 (415)
Q Consensus 192 ~~~l~~i~~~~~~~~~~li~De~~~~~~~ 220 (415)
.++++++++.|+++|+.||+|-++-+...
T Consensus 74 ~~d~~~lv~~~h~~Gi~VilD~V~NH~~~ 102 (471)
T 1jae_A 74 ESAFTDMTRRCNDAGVRIYVDAVINHMTG 102 (471)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECCSBCCS
T ss_pred HHHHHHHHHHHHHCCCEEEEEEecccccC
Confidence 49999999999999999999999877553
No 373
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=22.64 E-value=3.2e+02 Score=22.88 Aligned_cols=65 Identities=11% Similarity=-0.037 Sum_probs=33.4
Q ss_pred CcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHH---HHHhCCCeEEEeeccCCCCCCCChhHHHhhc
Q 014936 101 NDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYEL---SAAFRHIEVRHFDLLPDKGWEVDLDDIESLA 170 (415)
Q Consensus 101 ~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~---~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~ 170 (415)
..++||.++...=..+...|.+.|.+|++..-.-..... .+...|.++..+..+. -|.+.+++.+
T Consensus 25 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv-----~d~~~v~~~~ 92 (279)
T 3sju_A 25 QTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAGHDVDGSSCDV-----TSTDEVHAAV 92 (279)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCEEEEECCT-----TCHHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCC-----CCHHHHHHHH
Confidence 345555554443344555666788888765433222222 2233466666665533 2455555444
No 374
>3lou_A Formyltetrahydrofolate deformylase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative hydrolase; HET: MSE; 1.90A {Burkholderia mallei}
Probab=22.48 E-value=1.1e+02 Score=26.44 Aligned_cols=114 Identities=13% Similarity=0.129 Sum_probs=58.4
Q ss_pred CcHHHHHHHHHHHhhhCCCC------CCCCcE-EEeCChHHHHHHHHHHhcCC--CCEEEEcCCCCcchHHHHHhCCCeE
Q 014936 78 GLPLTRRAIAEYLSRDLPYK------LTPNDV-FVTSGCTQAIDVAMALLSRP--GANILLPRPGFPIYELSAAFRHIEV 148 (415)
Q Consensus 78 g~~~lr~~ia~~~~~~~~~~------~~~~~i-~i~~g~~~al~~~~~~l~~~--gd~vi~~~p~y~~~~~~~~~~g~~~ 148 (415)
...+|++.+++.-.+ ++.. -.+-+| ++.||..+++..++...... .-.|...-..+......++..|+.+
T Consensus 68 ~~~~L~~~f~~la~~-~~m~~~l~~~~~~~ri~vl~Sg~g~~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~A~~~gIp~ 146 (292)
T 3lou_A 68 RVDALRREFEPIAER-FRMQWAIHDVAARPKVLIMVSKLEHCLADLLFRWKMGELKMDIVGIVSNHPDFAPLAAQHGLPF 146 (292)
T ss_dssp CHHHHHHHHHHHHHH-HTCEEEEEETTSCCEEEEEECSCCHHHHHHHHHHHHTSSCCEEEEEEESSSTTHHHHHHTTCCE
T ss_pred CHHHHHHHHHHHHHh-cCcEEEeeccCCCCEEEEEEcCCCcCHHHHHHHHHcCCCCcEEEEEEeCcHHHHHHHHHcCCCE
Confidence 456788777654332 2211 123344 56677667777777765321 1233222222333456789999998
Q ss_pred EEeeccCCCCCCCChhHHHhhcCC-CceEEEecCCCCccccCCCHHHHHH
Q 014936 149 RHFDLLPDKGWEVDLDDIESLADQ-NTVALVIINPGNPCGNVYSYQHLQK 197 (415)
Q Consensus 149 ~~~~~~~~~~~~~~~~~l~~~~~~-~~~~v~i~~p~nptG~~~~~~~l~~ 197 (415)
..+|....+....+ +++.+.+++ ++.++++.. .+.++|.+-+..
T Consensus 147 ~~~~~~~~~r~~~~-~~~~~~l~~~~~Dlivla~----y~~il~~~~l~~ 191 (292)
T 3lou_A 147 RHFPITADTKAQQE-AQWLDVFETSGAELVILAR----YMQVLSPEASAR 191 (292)
T ss_dssp EECCCCSSCHHHHH-HHHHHHHHHHTCSEEEESS----CCSCCCHHHHHH
T ss_pred EEeCCCcCCHHHHH-HHHHHHHHHhCCCEEEecC----chhhCCHHHHhh
Confidence 88775321110001 223333332 456666654 566777555543
No 375
>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*
Probab=22.47 E-value=3.3e+02 Score=22.44 Aligned_cols=64 Identities=19% Similarity=0.023 Sum_probs=31.2
Q ss_pred cEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcc-hHHHHHh---C-CCeEEEeeccCCCCCCCChhHHHhhc
Q 014936 102 DVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPI-YELSAAF---R-HIEVRHFDLLPDKGWEVDLDDIESLA 170 (415)
Q Consensus 102 ~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~-~~~~~~~---~-g~~~~~~~~~~~~~~~~~~~~l~~~~ 170 (415)
.+++|.++...=..+...|.+.|.+|++..-.-.. ....... . |.++..+..+. -|.+.+++.+
T Consensus 6 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~v~~~~ 74 (260)
T 1x1t_A 6 VAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADL-----SKGEAVRGLV 74 (260)
T ss_dssp EEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCT-----TSHHHHHHHH
T ss_pred EEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHhccCCcEEEEECCC-----CCHHHHHHHH
Confidence 45555544433344455566788888776433222 2222221 1 55555554432 2455555544
No 376
>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}
Probab=22.41 E-value=2.5e+02 Score=23.33 Aligned_cols=92 Identities=15% Similarity=0.202 Sum_probs=45.8
Q ss_pred cEEEeCChHHHHH-HHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCc-eEEEe
Q 014936 102 DVFVTSGCTQAID-VAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNT-VALVI 179 (415)
Q Consensus 102 ~i~i~~g~~~al~-~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~v~i 179 (415)
.+++.+|++.+|- .+...|.+.|.+|++..-.-... ....+.++..+..+- -|.+++++.++.-. .-+++
T Consensus 12 K~alVTGas~GIG~aia~~la~~Ga~Vv~~~~~~~~~---~~~~~~~~~~~~~Dv-----~~~~~v~~~~~~~g~iDiLV 83 (242)
T 4b79_A 12 QQVLVTGGSSGIGAAIAMQFAELGAEVVALGLDADGV---HAPRHPRIRREELDI-----TDSQRLQRLFEALPRLDVLV 83 (242)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTST---TSCCCTTEEEEECCT-----TCHHHHHHHHHHCSCCSEEE
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHH---hhhhcCCeEEEEecC-----CCHHHHHHHHHhcCCCCEEE
Confidence 4444445445554 44455668898887754322211 122334455554432 24566665554321 22455
Q ss_pred cCCC-CccccCCCHHHHHHHHHH
Q 014936 180 INPG-NPCGNVYSYQHLQKLAET 201 (415)
Q Consensus 180 ~~p~-nptG~~~~~~~l~~i~~~ 201 (415)
+|.. +.....++.++++++.++
T Consensus 84 NNAGi~~~~~~~~~~~w~~~~~v 106 (242)
T 4b79_A 84 NNAGISRDREEYDLATFERVLRL 106 (242)
T ss_dssp ECCCCCCGGGGGSHHHHHHHHHH
T ss_pred ECCCCCCCcccCCHHHHHHHHHH
Confidence 5542 222334677777777664
No 377
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}
Probab=22.36 E-value=3.6e+02 Score=22.88 Aligned_cols=33 Identities=21% Similarity=0.231 Sum_probs=19.4
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcC
Q 014936 99 TPNDVFVTSGCTQAIDVAMALLSRPGANILLPR 131 (415)
Q Consensus 99 ~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~ 131 (415)
....++||.+++..=..+...|.+.|..|++..
T Consensus 27 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~ 59 (299)
T 3t7c_A 27 EGKVAFITGAARGQGRSHAITLAREGADIIAID 59 (299)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEe
Confidence 334556665554443445556677888887653
No 378
>3e96_A Dihydrodipicolinate synthase; structural genomics, nysgrc, target 9375C, operon, PSI-2; 1.80A {Bacillus clausii ksm-k16} SCOP: c.1.10.0
Probab=22.20 E-value=1.7e+02 Score=25.59 Aligned_cols=53 Identities=11% Similarity=0.110 Sum_probs=33.2
Q ss_pred CCCCChhHHHhhcC----CCceEEEecCCCCccccCCCHHHHHHHHHHHhhc---CcEEEE
Q 014936 158 GWEVDLDDIESLAD----QNTVALVIINPGNPCGNVYSYQHLQKLAETANKL---KTLVIA 211 (415)
Q Consensus 158 ~~~~~~~~l~~~~~----~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~---~~~li~ 211 (415)
+..+|.+.+++.++ ..... +++..++--+..++.++.+++++.+.+. ++.+|.
T Consensus 27 dg~iD~~~l~~lv~~li~~Gv~G-l~v~GtTGE~~~Ls~eEr~~v~~~~v~~~~grvpVia 86 (316)
T 3e96_A 27 DGSIDWHHYKETVDRIVDNGIDV-IVPCGNTSEFYALSLEEAKEEVRRTVEYVHGRALVVA 86 (316)
T ss_dssp TCCBCHHHHHHHHHHHHTTTCCE-ECTTSGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEE
T ss_pred CCCCCHHHHHHHHHHHHHcCCCE-EEeCccccCcccCCHHHHHHHHHHHHHHhCCCCcEEE
Confidence 45788888776543 33344 3444444445668888888888877653 455554
No 379
>4a29_A Engineered retro-aldol enzyme RA95.0; de novo protein, engineered enzyme, retro-aldolase, directed evolution; HET: 3NK MLT; 1.10A {Synthetic construct} PDB: 4a2s_A* 4a2r_A* 3tc7_A 3tc6_A 3nl8_A* 3nxf_A* 3o6y_X 3ud6_A* 1igs_A 1juk_A 1jul_A* 3hoj_A 1a53_A* 1lbf_A* 1lbl_A* 3nyz_A 3nz1_A* 3uy7_A 3uxd_A* 3uxa_A* ...
Probab=22.10 E-value=2.1e+02 Score=24.14 Aligned_cols=78 Identities=13% Similarity=0.056 Sum_probs=45.5
Q ss_pred EEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhc
Q 014936 126 NILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKL 205 (415)
Q Consensus 126 ~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~ 205 (415)
.|+++...|.+..+.++..... +.+|+- ..+|-+|.-++.++-.-...+|++. -.+++.++++++.+.|++.
T Consensus 81 SVLTd~~~F~Gs~~~L~~vr~~-v~lPvL-rKDFiid~yQI~eAr~~GADaILLI------~a~L~~~~l~~l~~~A~~l 152 (258)
T 4a29_A 81 SITTEEKYFNGSYETLRKIASS-VSIPIL-MSDFIVKESQIDDAYNLGADTVLLI------VKILTERELESLLEYARSY 152 (258)
T ss_dssp EEECCSTTTCCCHHHHHHHHTT-CSSCEE-EESCCCSHHHHHHHHHHTCSEEEEE------GGGSCHHHHHHHHHHHHHT
T ss_pred EEeCCCCCCCCCHHHHHHHHHh-cCCCEe-eccccccHHHHHHHHHcCCCeeehH------HhhcCHHHHHHHHHHHHHH
Confidence 4666666666544433221111 112221 1356788888866533233344332 2457778999999999999
Q ss_pred CcEEEE
Q 014936 206 KTLVIA 211 (415)
Q Consensus 206 ~~~li~ 211 (415)
|+-+++
T Consensus 153 Gl~~Lv 158 (258)
T 4a29_A 153 GMEPLI 158 (258)
T ss_dssp TCCCEE
T ss_pred hHHHHH
Confidence 987776
No 380
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}
Probab=22.05 E-value=3.4e+02 Score=22.47 Aligned_cols=97 Identities=10% Similarity=0.048 Sum_probs=48.7
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCc---ch---HHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCC
Q 014936 99 TPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFP---IY---ELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ 172 (415)
Q Consensus 99 ~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~---~~---~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~ 172 (415)
....+++|.+++..=..+...|.+.|.+|++..-.-. .. ...+...|.++..+..+- -|.+.+++.++.
T Consensus 10 ~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv-----~d~~~v~~~~~~ 84 (262)
T 3ksu_A 10 KNKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQGAKVALYQSDL-----SNEEEVAKLFDF 84 (262)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHTTSSCEEEEEESCGGGHHHHHHHHHHHHTTTCEEEEEECCC-----CSHHHHHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecCccCHHHHHHHHHHHHhcCCcEEEEECCC-----CCHHHHHHHHHH
Confidence 3345566655544444556667788988887422111 11 122334466777776543 245555554432
Q ss_pred -----CceEEEecCCC-Ccccc--CCCHHHHHHHHH
Q 014936 173 -----NTVALVIINPG-NPCGN--VYSYQHLQKLAE 200 (415)
Q Consensus 173 -----~~~~v~i~~p~-nptG~--~~~~~~l~~i~~ 200 (415)
...-+++.+.. ...+. -.+.+++.+..+
T Consensus 85 ~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~ 120 (262)
T 3ksu_A 85 AEKEFGKVDIAINTVGKVLKKPIVETSEAEFDAMDT 120 (262)
T ss_dssp HHHHHCSEEEEEECCCCCCSSCGGGCCHHHHHHHHH
T ss_pred HHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 12334444442 22221 246677766655
No 381
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=21.99 E-value=3.1e+02 Score=22.04 Aligned_cols=94 Identities=16% Similarity=0.132 Sum_probs=47.4
Q ss_pred cEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHH----HhCCCeEEEeeccCCCCCCCChhHHHhhcCC-----
Q 014936 102 DVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSA----AFRHIEVRHFDLLPDKGWEVDLDDIESLADQ----- 172 (415)
Q Consensus 102 ~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~----~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~----- 172 (415)
.+++|.|+...=..+.+.|.+.|.+|++..-.-....... ...+.++..+..+. -|.+.+++.++.
T Consensus 4 ~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~v~~~~~~~~~~~ 78 (235)
T 3l77_A 4 VAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGVEVFYHHLDV-----SKAESVEEFSKKVLERF 78 (235)
T ss_dssp EEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCT-----TCHHHHHHHCC-HHHHH
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCeEEEEEecc-----CCHHHHHHHHHHHHHhc
Confidence 3556655544334455566678888877644333222222 23466666665533 256777666543
Q ss_pred -CceEEEecCC-CCcccc--CCCHHHHHHHHHH
Q 014936 173 -NTVALVIINP-GNPCGN--VYSYQHLQKLAET 201 (415)
Q Consensus 173 -~~~~v~i~~p-~nptG~--~~~~~~l~~i~~~ 201 (415)
+.. +++.+. ..+.+. ..+.+++.+..+.
T Consensus 79 g~id-~li~~Ag~~~~~~~~~~~~~~~~~~~~~ 110 (235)
T 3l77_A 79 GDVD-VVVANAGLGYFKRLEELSEEEFHEMIEV 110 (235)
T ss_dssp SSCS-EEEECCCCCCCCCTTTSCHHHHHHHHHH
T ss_pred CCCC-EEEECCccccccCcccCCHHHHHHHHHH
Confidence 223 344443 222222 2366666665543
No 382
>3t7y_A YOP proteins translocation protein U; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta; 2.10A {Chlamydia trachomatis} SCOP: d.367.1.0
Probab=21.74 E-value=44 Score=23.50 Aligned_cols=24 Identities=8% Similarity=0.155 Sum_probs=19.7
Q ss_pred HHHHHHHHHHhhcCcEEEEccccC
Q 014936 193 QHLQKLAETANKLKTLVIADEVYG 216 (415)
Q Consensus 193 ~~l~~i~~~~~~~~~~li~De~~~ 216 (415)
.--.+|.++++++|++++.|..-.
T Consensus 42 ~~A~~I~~~A~e~gVPi~e~~~LA 65 (97)
T 3t7y_A 42 LRAKRIIAEAEKYGVPIMRNVPLA 65 (97)
T ss_dssp HHHHHHHHHHHHHTCCEEECHHHH
T ss_pred HHHHHHHHHHHHcCCeEEECHHHH
Confidence 446889999999999999997644
No 383
>3uuw_A Putative oxidoreductase with NAD(P)-binding rossm domain; structural genomics, center for structural genomics of infec diseases, csgid; HET: 1PE PGE; 1.63A {Clostridium difficile}
Probab=21.60 E-value=2.2e+02 Score=24.45 Aligned_cols=72 Identities=14% Similarity=0.084 Sum_probs=40.8
Q ss_pred CcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEcc
Q 014936 134 FPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADE 213 (415)
Q Consensus 134 y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De 213 (415)
|..+.+.+. .++++.+.+.+. ...+.+..+++.. +-|++.-|- ..+.++.+++.+.++++|+.+.+..
T Consensus 57 ~~~~~~ll~--~~D~V~i~tp~~----~h~~~~~~al~~g-k~vl~EKP~-----~~~~~~~~~l~~~a~~~g~~~~v~~ 124 (308)
T 3uuw_A 57 FDSIESLAK--KCDCIFLHSSTE----THYEIIKILLNLG-VHVYVDKPL-----ASTVSQGEELIELSTKKNLNLMVGF 124 (308)
T ss_dssp CSCHHHHHT--TCSEEEECCCGG----GHHHHHHHHHHTT-CEEEECSSS-----SSSHHHHHHHHHHHHHHTCCEEECC
T ss_pred cCCHHHHHh--cCCEEEEeCCcH----hHHHHHHHHHHCC-CcEEEcCCC-----CCCHHHHHHHHHHHHHcCCEEEEee
Confidence 444555544 455555443221 2234444444332 334443342 2456889999999999999888876
Q ss_pred ccCC
Q 014936 214 VYGH 217 (415)
Q Consensus 214 ~~~~ 217 (415)
.+.+
T Consensus 125 ~~r~ 128 (308)
T 3uuw_A 125 NRRF 128 (308)
T ss_dssp GGGG
T ss_pred cccc
Confidence 6554
No 384
>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}
Probab=21.47 E-value=2.9e+02 Score=22.46 Aligned_cols=64 Identities=13% Similarity=-0.035 Sum_probs=30.4
Q ss_pred cEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHH----hCCCeEEEeeccCCCCCCCChhHHHhhc
Q 014936 102 DVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAA----FRHIEVRHFDLLPDKGWEVDLDDIESLA 170 (415)
Q Consensus 102 ~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~----~~g~~~~~~~~~~~~~~~~~~~~l~~~~ 170 (415)
.+++|.++...=..+...|.+.|.+|++..-.-........ ..+.++..+..+. -|.+.+++.+
T Consensus 4 ~vlItGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~~~~~~ 71 (250)
T 2cfc_A 4 VAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYADKVLRVRADV-----ADEGDVNAAI 71 (250)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHSTTTGGGEEEEECCT-----TCHHHHHHHH
T ss_pred EEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecC-----CCHHHHHHHH
Confidence 35555554433344455566778777765432222222221 1244555555432 2556665544
No 385
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=21.39 E-value=1.8e+02 Score=25.29 Aligned_cols=54 Identities=19% Similarity=0.108 Sum_probs=33.4
Q ss_pred CCCCCChhHHHhhcC----CCceEEEecCCCCccccCCCHHHHHHHHHHHhhc---CcEEEE
Q 014936 157 KGWEVDLDDIESLAD----QNTVALVIINPGNPCGNVYSYQHLQKLAETANKL---KTLVIA 211 (415)
Q Consensus 157 ~~~~~~~~~l~~~~~----~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~---~~~li~ 211 (415)
.+..+|.+.+++.++ .....+++ ..++--+..++.++.+++++.+.+. ++.+|.
T Consensus 29 ~dg~iD~~~l~~lv~~li~~Gv~gi~v-~GttGE~~~Lt~~Er~~v~~~~~~~~~grvpvia 89 (304)
T 3l21_A 29 GDGSLDTATAARLANHLVDQGCDGLVV-SGTTGESPTTTDGEKIELLRAVLEAVGDRARVIA 89 (304)
T ss_dssp TTSCBCHHHHHHHHHHHHHTTCSEEEE-SSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEE
T ss_pred CCCCcCHHHHHHHHHHHHHcCCCEEEe-CccccchhhCCHHHHHHHHHHHHHHhCCCCeEEE
Confidence 345688888876653 33444433 3343445668888888888887653 355554
No 386
>1yht_A DSPB; beta barrel, hydrolase; 2.00A {Aggregatibacter actinomycetemcomitans} SCOP: c.1.8.6
Probab=21.38 E-value=63 Score=29.11 Aligned_cols=68 Identities=16% Similarity=0.195 Sum_probs=39.2
Q ss_pred HHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEE-----ecCCCCccccCCCHHHHHHHHHHHhhcCcEEE
Q 014936 139 LSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALV-----IINPGNPCGNVYSYQHLQKLAETANKLKTLVI 210 (415)
Q Consensus 139 ~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~-----i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li 210 (415)
+.....+.++..+-+..+.+|.+..+.+-+.. .. .+. ..+ ..+.+-.++.+++++|++.|+++|+-||
T Consensus 40 d~mA~~KlN~lH~HltDdq~~rle~~~~~~~~-~~--~~~~~~g~~~~-~~~~~g~YT~~di~eiv~YA~~rgI~VI 112 (367)
T 1yht_A 40 DTISLSGGNFLHLHFSDHENYAIESHLLNQRA-EN--AVQGKDGIYIN-PYTGKPFLSYRQLDDIKAYAKAKGIELI 112 (367)
T ss_dssp HHHHHTTCCEEEEECBSSSCBCBCBTTTTBCG-GG--SEECTTSCEEC-TTTCCEEBCHHHHHHHHHHHHHTTCEEE
T ss_pred HHHHHcCCcEEEEEEEcCCCceeeecchhhhh-hh--hccccCCCcCC-CCCCCCCcCHHHHHHHHHHHHHcCCEEE
Confidence 34456677777666654445555433221110 00 000 001 1123457999999999999999999888
No 387
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=21.34 E-value=3.7e+02 Score=23.10 Aligned_cols=54 Identities=17% Similarity=0.128 Sum_probs=29.4
Q ss_pred HHHHHHHHHHHhhhCCCCCC-CCcEEEeCC---hHHHHHHHHHHhcCCCCEEEEcCCCCcc
Q 014936 80 PLTRRAIAEYLSRDLPYKLT-PNDVFVTSG---CTQAIDVAMALLSRPGANILLPRPGFPI 136 (415)
Q Consensus 80 ~~lr~~ia~~~~~~~~~~~~-~~~i~i~~g---~~~al~~~~~~l~~~gd~vi~~~p~y~~ 136 (415)
.+=|+++.+...+.-+ . .--|++..| +.+++..+-.+-.-.-|.|++..|.|..
T Consensus 59 ~~Er~~v~~~~~~~~~---g~rvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y~~ 116 (301)
T 3m5v_A 59 HEEHRTCIEIAVETCK---GTKVKVLAGAGSNATHEAVGLAKFAKEHGADGILSVAPYYNK 116 (301)
T ss_dssp HHHHHHHHHHHHHHHT---TSSCEEEEECCCSSHHHHHHHHHHHHHTTCSEEEEECCCSSC
T ss_pred HHHHHHHHHHHHHHhC---CCCCeEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEcCCCCCC
Confidence 4555566665543211 1 124555444 4566665544443334899999998864
No 388
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}
Probab=21.31 E-value=2.6e+02 Score=23.01 Aligned_cols=33 Identities=18% Similarity=0.118 Sum_probs=18.9
Q ss_pred CcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCC
Q 014936 101 NDVFVTSGCTQAIDVAMALLSRPGANILLPRPG 133 (415)
Q Consensus 101 ~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~ 133 (415)
..+++|.+++..=..+.+.|.+.|.+|++..-.
T Consensus 8 k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~ 40 (250)
T 3nyw_A 8 GLAIITGASQGIGAVIAAGLATDGYRVVLIARS 40 (250)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHHTCEEEEEESC
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEECC
Confidence 345555554443344555566778888776433
No 389
>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2
Probab=21.22 E-value=3.4e+02 Score=22.23 Aligned_cols=63 Identities=10% Similarity=-0.052 Sum_probs=30.3
Q ss_pred EEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHH---HHhCCCeEEEeeccCCCCCCCChhHHHhhc
Q 014936 103 VFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELS---AAFRHIEVRHFDLLPDKGWEVDLDDIESLA 170 (415)
Q Consensus 103 i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~---~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~ 170 (415)
+++|.++...=..+...|.+.|.+|++..-.-...... +...|.++..+..+- -|.+.+++.+
T Consensus 5 vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~v~~~~ 70 (256)
T 1geg_A 5 ALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDV-----SDRDQVFAAV 70 (256)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCT-----TSHHHHHHHH
T ss_pred EEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecC-----CCHHHHHHHH
Confidence 45555444333444555667788877653222111222 223355555555432 2455555544
No 390
>2plg_A TLL0839 protein; hypothetical, uncharacterized, DUF1821, NYSGXRC, PSI-2, structural genomics, protein structure initiative; 2.60A {Synechococcus elongatus} SCOP: d.198.1.2
Probab=21.18 E-value=1.4e+02 Score=23.20 Aligned_cols=57 Identities=9% Similarity=0.130 Sum_probs=37.4
Q ss_pred CHHHHHHHHHhhcCeEEEcCCCCCC-CCeEEEEe-----eCChhhHHHHHHHHHHHHHHHHHHh
Q 014936 355 DDIDFCFKLAKEESVIILPGTAVGL-KNWLRVTF-----AVDPYSLEECLDRIKSFYQRHAKQL 412 (415)
Q Consensus 355 ~~~~~~~~ll~~~gi~v~~g~~~~~-~~~iRi~~-----~~~~~~l~~~l~~l~~~~~~~~~~~ 412 (415)
....+.++||+.+ -...-+..|+. .+.|=+.+ +.+.+++..++.++.....++..++
T Consensus 87 ~~~~l~~~LLE~N-~~~t~~arFaI~~n~V~~v~~r~ls~Ld~~E~~~aIt~V~~lAD~~Dd~L 149 (163)
T 2plg_A 87 DELALYRKLLTLN-WLTTFEAHFAIAEEQVQVVASRTLGGITAGEISRLITIVATLADDYDDAL 149 (163)
T ss_dssp THHHHHHHHHHHT-TTTTTTCEEEEETTEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHhc-cccccceEEEEECCEEEEEEEEEcccCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 5788999998874 22111222222 34443333 3688999999999999988877765
No 391
>2wc7_A Alpha amylase, catalytic region; CD/PUL-hydrolyzing enzymes, hydrolase, glycosidase, neopullu; 2.37A {Nostoc punctiforme} PDB: 2wcs_A 2wkg_A
Probab=21.18 E-value=56 Score=30.68 Aligned_cols=27 Identities=22% Similarity=0.417 Sum_probs=24.6
Q ss_pred HHHHHHHHHHhhcCcEEEEccccCCcc
Q 014936 193 QHLQKLAETANKLKTLVIADEVYGHLV 219 (415)
Q Consensus 193 ~~l~~i~~~~~~~~~~li~De~~~~~~ 219 (415)
++++++++-|+++|+.||+|-++-+..
T Consensus 103 ~df~~Lv~~aH~~Gi~VilD~V~NH~s 129 (488)
T 2wc7_A 103 EAFKELLDAAHQRNIKVVLDGVFNHSS 129 (488)
T ss_dssp HHHHHHHHHHHHTTCEEEEEECCSBCC
T ss_pred HHHHHHHHHHHHCCCEEEEEeCCCcCC
Confidence 999999999999999999999887643
No 392
>1zja_A Trehalulose synthase; sucrose isomerase, alpha-amylase family, (beta/alpha)8 barrel; 1.60A {Pseudomonas mesoacidophila} PDB: 1zjb_A 2pwd_A* 2pwh_A 2pwg_A 2pwe_A* 2pwf_A* 3gbe_A* 3gbd_A*
Probab=21.01 E-value=71 Score=30.63 Aligned_cols=28 Identities=18% Similarity=0.247 Sum_probs=25.3
Q ss_pred HHHHHHHHHHHhhcCcEEEEccccCCcc
Q 014936 192 YQHLQKLAETANKLKTLVIADEVYGHLV 219 (415)
Q Consensus 192 ~~~l~~i~~~~~~~~~~li~De~~~~~~ 219 (415)
.++++++++.|+++|+.||+|-++-+..
T Consensus 79 ~~df~~Lv~~aH~~Gi~VilD~V~NHts 106 (557)
T 1zja_A 79 MEDFDRLMAELKKRGMRLMVDVVINHSS 106 (557)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECCSBCC
T ss_pred HHHHHHHHHHHHHCCCEEEEEEeccccc
Confidence 4999999999999999999999987654
No 393
>1vhx_A Putative holliday junction resolvase; structural genomics, hydrolase; 1.96A {Bacillus subtilis} SCOP: c.55.3.8
Probab=20.98 E-value=1.8e+02 Score=22.09 Aligned_cols=58 Identities=21% Similarity=0.175 Sum_probs=35.3
Q ss_pred CCChhHHHhhcCC-CceEEEecCCCCccccCCC-HHHHHHHH-HHHhhcCcE-EEEccccCC
Q 014936 160 EVDLDDIESLADQ-NTVALVIINPGNPCGNVYS-YQHLQKLA-ETANKLKTL-VIADEVYGH 217 (415)
Q Consensus 160 ~~~~~~l~~~~~~-~~~~v~i~~p~nptG~~~~-~~~l~~i~-~~~~~~~~~-li~De~~~~ 217 (415)
..+.+.|.+.+++ ++..+++-.|-|.-|..-. ....+..+ .++.+.++. .++||.++-
T Consensus 41 ~~~~~~l~~li~~~~~~~ivVGlP~~~nGt~~~~~~~ar~f~~~L~~~~~lpV~~vDEr~Ts 102 (150)
T 1vhx_A 41 DYGLSRLSELIKDYTIDKIVLGFPKNMNGTVGPRGEASQTFAKVLETTYNVPVVLWDERLTT 102 (150)
T ss_dssp BCCHHHHHHHHTTSEEEEEEEECCCCBTTBCCHHHHHHHHHHHHHHHHHCSCEEEECCSSCH
T ss_pred HHHHHHHHHHHHHcCCCEEEEeeeecCCcchhHHHHHHHHHHHHHHHhhCCCEEEecCCCCH
Confidence 3578888888876 4677888888655555422 12224444 333445665 457988764
No 394
>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*
Probab=20.96 E-value=2.8e+02 Score=22.61 Aligned_cols=64 Identities=13% Similarity=0.108 Sum_probs=32.5
Q ss_pred cEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCC-cc---hHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhc
Q 014936 102 DVFVTSGCTQAIDVAMALLSRPGANILLPRPGF-PI---YELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLA 170 (415)
Q Consensus 102 ~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y-~~---~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~ 170 (415)
.+++|.++...=..+...|.+.|.+|++..-.- .. ....+...|.++..+..+- -|.+.+++.+
T Consensus 6 ~~lVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv-----~d~~~v~~~~ 73 (246)
T 3osu_A 6 SALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANV-----ADADEVKAMI 73 (246)
T ss_dssp EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTSCEEEEECCT-----TCHHHHHHHH
T ss_pred EEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEccC-----CCHHHHHHHH
Confidence 455555544433445556677888886643221 11 1223344566666665533 2455555444
No 395
>3c01_E Surface presentation of antigens protein SPAS; auto cleavage protein, flagella, ESCU, YSCU, intein, T3SS, M inner membrane, transmembrane; 2.60A {Salmonella typhimurium} SCOP: d.367.1.1
Probab=20.89 E-value=47 Score=23.41 Aligned_cols=24 Identities=25% Similarity=0.177 Sum_probs=19.5
Q ss_pred HHHHHHHHHHhhcCcEEEEccccC
Q 014936 193 QHLQKLAETANKLKTLVIADEVYG 216 (415)
Q Consensus 193 ~~l~~i~~~~~~~~~~li~De~~~ 216 (415)
.--.+|.++++++|++++.|-.-+
T Consensus 27 ~~A~~I~e~A~e~gVPi~e~~~LA 50 (98)
T 3c01_E 27 QRALAVRAYAEKVGVPVIVDIKLA 50 (98)
T ss_dssp HHHHHHHHHHHHHTCCEEECHHHH
T ss_pred HHHHHHHHHHHHcCCCeecCHHHH
Confidence 446888999999999999996544
No 396
>1meo_A Phosophoribosylglycinamide formyltransferase; purine biosynthesis; 1.72A {Homo sapiens} SCOP: c.65.1.1 PDB: 1njs_A* 1rbm_A* 1rbq_A* 1rby_A* 1rbz_A* 1rc0_A* 1rc1_A* 1zly_A* 1zlx_A* 1mej_B 1men_A*
Probab=20.87 E-value=1.7e+02 Score=23.83 Aligned_cols=87 Identities=15% Similarity=0.121 Sum_probs=44.6
Q ss_pred EEeCChHHHHHHHHHHhcCC--CCEE--EEcCCCCcchHHHHHhCCCeEEEeeccCCCC-CCCChhHHHhhcCC-CceEE
Q 014936 104 FVTSGCTQAIDVAMALLSRP--GANI--LLPRPGFPIYELSAAFRHIEVRHFDLLPDKG-WEVDLDDIESLADQ-NTVAL 177 (415)
Q Consensus 104 ~i~~g~~~al~~~~~~l~~~--gd~v--i~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~-~~~~~~~l~~~~~~-~~~~v 177 (415)
++.+|....+..++..+... +-.| +++++.-......++..|+.+..++.....+ ...+ +++.+.++. ++.++
T Consensus 5 Vl~SG~Gs~L~aLi~~~~~~~~~~~I~~Vvs~~~~~~~~~~A~~~gIp~~~~~~~~~~~r~~~~-~~~~~~l~~~~~Dli 83 (209)
T 1meo_A 5 VLISGTGSNLQALIDSTREPNSSAQIDIVISNKAAVAGLDKAERAGIPTRVINHKLYKNRVEFD-SAIDLVLEEFSIDIV 83 (209)
T ss_dssp EEESSSCTTHHHHHHHHHSTTCSCEEEEEEESSTTCHHHHHHHHTTCCEEECCGGGSSSHHHHH-HHHHHHHHHTTCCEE
T ss_pred EEEECCchHHHHHHHHHhcCCCCcEEEEEEeCCCChHHHHHHHHcCCCEEEECccccCchhhhh-HHHHHHHHhcCCCEE
Confidence 55666666777777665432 2232 4445443344677888999887665321110 0001 223333322 45555
Q ss_pred EecCCCCccccCCCHHHH
Q 014936 178 VIINPGNPCGNVYSYQHL 195 (415)
Q Consensus 178 ~i~~p~nptG~~~~~~~l 195 (415)
++.. .|.+++.+-+
T Consensus 84 v~a~----y~~il~~~~l 97 (209)
T 1meo_A 84 CLAG----FMRILSGPFV 97 (209)
T ss_dssp EEES----CCSCCCHHHH
T ss_pred EEcc----hhhhCCHHHH
Confidence 5543 4667775544
No 397
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=20.87 E-value=1.5e+02 Score=25.69 Aligned_cols=54 Identities=19% Similarity=0.126 Sum_probs=35.2
Q ss_pred CCCCCChhHHHhhcC----CCceEEEecCCCCccccCCCHHHHHHHHHHHhhc---CcEEEE
Q 014936 157 KGWEVDLDDIESLAD----QNTVALVIINPGNPCGNVYSYQHLQKLAETANKL---KTLVIA 211 (415)
Q Consensus 157 ~~~~~~~~~l~~~~~----~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~---~~~li~ 211 (415)
.+..+|.+.+++.++ .....++++ .++--+..++.++.+++++.+.+. ++.+|.
T Consensus 25 ~dg~iD~~~l~~lv~~li~~Gv~Gl~v~-GtTGE~~~Ls~eEr~~v~~~~~~~~~grvpVia 85 (303)
T 2wkj_A 25 QQQALDKASLRRLVQFNIQQGIDGLYVG-GSTGEAFVQSLSEREQVLEIVAEEAKGKIKLIA 85 (303)
T ss_dssp TTSSBCHHHHHHHHHHHHHTTCSEEEES-STTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEE
T ss_pred CCCCcCHHHHHHHHHHHHHcCCCEEEEC-eeccChhhCCHHHHHHHHHHHHHHhCCCCcEEE
Confidence 456799998877653 344454443 344445668999999999888753 455554
No 398
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=20.86 E-value=4.1e+02 Score=23.01 Aligned_cols=54 Identities=15% Similarity=0.117 Sum_probs=28.6
Q ss_pred HHHHHHHHHHHhhhCCCCCCCCcEEEeCC---hHHHHHHHHHHhcCCCCEEEEcCCCCcc
Q 014936 80 PLTRRAIAEYLSRDLPYKLTPNDVFVTSG---CTQAIDVAMALLSRPGANILLPRPGFPI 136 (415)
Q Consensus 80 ~~lr~~ia~~~~~~~~~~~~~~~i~i~~g---~~~al~~~~~~l~~~gd~vi~~~p~y~~ 136 (415)
.+=|+++.+...+.-+ ..--|++..| +.+++..+-.+-.-.-|.|++..|.|..
T Consensus 75 ~~Er~~v~~~~v~~~~---grvpViaGvg~~st~eai~la~~A~~~Gadavlv~~P~y~~ 131 (314)
T 3qze_A 75 VEEHIQVIRRVVDQVK---GRIPVIAGTGANSTREAVALTEAAKSGGADACLLVTPYYNK 131 (314)
T ss_dssp HHHHHHHHHHHHHHHT---TSSCEEEECCCSSHHHHHHHHHHHHHTTCSEEEEECCCSSC
T ss_pred HHHHHHHHHHHHHHhC---CCCcEEEeCCCcCHHHHHHHHHHHHHcCCCEEEEcCCCCCC
Confidence 4455555555443211 1123555444 4566665544443334888888888863
No 399
>1m53_A Isomaltulose synthase; klebsiella SP. LX3, sucrose isomerization, isomerase; 2.20A {Klebsiella SP} SCOP: b.71.1.1 c.1.8.1
Probab=20.83 E-value=71 Score=30.71 Aligned_cols=28 Identities=18% Similarity=0.253 Sum_probs=25.3
Q ss_pred HHHHHHHHHHHhhcCcEEEEccccCCcc
Q 014936 192 YQHLQKLAETANKLKTLVIADEVYGHLV 219 (415)
Q Consensus 192 ~~~l~~i~~~~~~~~~~li~De~~~~~~ 219 (415)
.++++++++.|+++|+.||+|-+.-+..
T Consensus 92 ~~df~~lv~~aH~~Gi~VilD~V~NH~s 119 (570)
T 1m53_A 92 MEDFDSLVAEMKKRNMRLMIDVVINHTS 119 (570)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECCSBCC
T ss_pred HHHHHHHHHHHHHCCCEEEEEEeccccc
Confidence 4999999999999999999999987644
No 400
>3dhu_A Alpha-amylase; structural genomics, hydrolase, glycosidase, PSI-2, protein structure initiative; 2.00A {Lactobacillus plantarum}
Probab=20.82 E-value=64 Score=29.85 Aligned_cols=29 Identities=28% Similarity=0.448 Sum_probs=25.5
Q ss_pred CHHHHHHHHHHHhhcCcEEEEccccCCcc
Q 014936 191 SYQHLQKLAETANKLKTLVIADEVYGHLV 219 (415)
Q Consensus 191 ~~~~l~~i~~~~~~~~~~li~De~~~~~~ 219 (415)
+.++++++++.|+++|+.||+|-+.-+..
T Consensus 82 t~~~~~~lv~~~h~~Gi~vi~D~V~NH~~ 110 (449)
T 3dhu_A 82 TLADFKALTDRAHELGMKVMLDIVYNHTS 110 (449)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCSEEC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEccCcCc
Confidence 35999999999999999999999986644
No 401
>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}
Probab=20.76 E-value=2.9e+02 Score=23.06 Aligned_cols=43 Identities=12% Similarity=0.115 Sum_probs=24.9
Q ss_pred ChhHHHhhcCCCceEEEecCC-CCccccCCCHHHHHHHHHHHhhcCc
Q 014936 162 DLDDIESLADQNTVALVIINP-GNPCGNVYSYQHLQKLAETANKLKT 207 (415)
Q Consensus 162 ~~~~l~~~~~~~~~~v~i~~p-~nptG~~~~~~~l~~i~~~~~~~~~ 207 (415)
|.+.++++++. ...|+.+.+ .++... .....+.+++.|++.++
T Consensus 55 d~~~l~~~~~~-~d~vi~~a~~~~~~~~--~~~~~~~l~~aa~~~gv 98 (289)
T 3e48_A 55 NQESMVEAFKG-MDTVVFIPSIIHPSFK--RIPEVENLVYAAKQSGV 98 (289)
T ss_dssp CHHHHHHHTTT-CSEEEECCCCCCSHHH--HHHHHHHHHHHHHHTTC
T ss_pred CHHHHHHHHhC-CCEEEEeCCCCccchh--hHHHHHHHHHHHHHcCC
Confidence 67888888864 344444432 222111 12456788888888774
No 402
>1pq4_A Periplasmic binding protein component of AN ABC T uptake transporter; ZNUA, loop, metal-binding, metal binding protein; 1.90A {Synechocystis SP} SCOP: c.92.2.2 PDB: 2ov3_A 2ov1_A
Probab=20.75 E-value=1.8e+02 Score=24.98 Aligned_cols=57 Identities=16% Similarity=0.267 Sum_probs=31.6
Q ss_pred CCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhh---cCCCceEEEecCCCCc
Q 014936 123 PGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESL---ADQNTVALVIINPGNP 185 (415)
Q Consensus 123 ~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~---~~~~~~~v~i~~p~np 185 (415)
++..+++..+.| .-+++.+|++...+.. .+..+++..|.+. ++.....+++..|+.+
T Consensus 189 ~~~~~v~~H~af---~Yf~~~yGl~~~~~~~---~~~eps~~~l~~l~~~ik~~~v~~If~e~~~~ 248 (291)
T 1pq4_A 189 PQRKFIVFHPSW---AYFARDYNLVQIPIEV---EGQEPSAQELKQLIDTAKENNLTMVFGETQFS 248 (291)
T ss_dssp SCCEEEESSCCC---HHHHHHTTCEEEESCB---TTBCCCHHHHHHHHHHHHTTTCCEEEEETTSC
T ss_pred CCCEEEEECCch---HHHHHHCCCEEeeccc---CCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCC
Confidence 467788876655 4567888998765432 1234555555443 3333333445555433
No 403
>4aef_A Neopullulanase (alpha-amylase II); hydrolase, thermostability, high temperature; 2.34A {Pyrococcus furiosus}
Probab=20.74 E-value=66 Score=31.50 Aligned_cols=28 Identities=21% Similarity=0.313 Sum_probs=25.7
Q ss_pred CHHHHHHHHHHHhhcCcEEEEccccCCc
Q 014936 191 SYQHLQKLAETANKLKTLVIADEVYGHL 218 (415)
Q Consensus 191 ~~~~l~~i~~~~~~~~~~li~De~~~~~ 218 (415)
+.++++++++-|+++|+.||+|-++-+.
T Consensus 284 t~~df~~LV~~aH~~GI~VIlD~V~NHt 311 (645)
T 4aef_A 284 GDRAFVDLLSELKRFDIKVILDGVFHHT 311 (645)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCSBC
T ss_pred CHHHHHHHHHHhhhcCCEEEEEeccccc
Confidence 6699999999999999999999998764
No 404
>2pcq_A Putative dihydrodipicolinate synthase; lyase, lysine biosynthesis, dihydrodipicoliante, S genomics, NPPSFA; 2.10A {Thermus thermophilus}
Probab=20.71 E-value=49 Score=28.53 Aligned_cols=51 Identities=12% Similarity=0.074 Sum_probs=31.7
Q ss_pred CCCCChhHHHhhcCC---CceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEE
Q 014936 158 GWEVDLDDIESLADQ---NTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVI 210 (415)
Q Consensus 158 ~~~~~~~~l~~~~~~---~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li 210 (415)
+..+|.+.+++.++- ....++ +..++--+..++.++.+++++.+.+ ++.+|
T Consensus 13 dg~iD~~~l~~lv~~li~~v~gl~-v~GttGE~~~Ls~~Er~~v~~~~~~-rvpvi 66 (283)
T 2pcq_A 13 EGRLDEEAFRELAQALEPLVDGLL-VYGSNGEGVHLTPEERARGLRALRP-RKPFL 66 (283)
T ss_dssp TCCBCHHHHHHHHHHHGGGSSCCE-ETCTTTTGGGSCHHHHHHHHHTCCC-SSCCE
T ss_pred CCCcCHHHHHHHHHHHHhhCCEEE-ECCcCcCchhcCHHHHHHHHHHHHh-CCcEE
Confidence 456888887765431 233333 3344444566888999999888876 44444
No 405
>3rcn_A Beta-N-acetylhexosaminidase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta half sandwich; HET: MSE; 2.51A {Arthrobacter aurescens}
Probab=20.68 E-value=70 Score=30.58 Aligned_cols=113 Identities=19% Similarity=0.313 Sum_probs=63.3
Q ss_pred CCCCCcEEEeCChHHHHHHHHHHhc---C----------CCC------EEEEcCCCCcc-------------------hH
Q 014936 97 KLTPNDVFVTSGCTQAIDVAMALLS---R----------PGA------NILLPRPGFPI-------------------YE 138 (415)
Q Consensus 97 ~~~~~~i~i~~g~~~al~~~~~~l~---~----------~gd------~vi~~~p~y~~-------------------~~ 138 (415)
.+ ++.|.|+.++..++.-.+.+|. . .|. ..|.+.|.|.- +.
T Consensus 83 ~v-~~~i~I~a~~~~G~f~glqTL~QLl~~~~~~~~~~~~~~~~~ip~~~I~D~Prf~~RG~mLDvsRhf~~~~~ik~~I 161 (543)
T 3rcn_A 83 EV-SDAVVISAGGAAGAFYGAQTLLQLLGPAALRQAPVVAVEGWSVPRVSVEDKPRFGYRGTMLDVARHFMPKDNVLRFI 161 (543)
T ss_dssp EE-SSSEEEEESSHHHHHHHHHHHHHHHCGGGGSSSCCSCCSCEEEEEEEEEECCSCSEEEEEEETTTSCCCHHHHHHHH
T ss_pred EE-CCeEEEEECCHHHHHHHHHHHHHHHhhhcccccccccCcceeccCEEEEecCCCCccccccccCCCccCHHHHHHHH
Confidence 46 7788888877766555555542 1 121 23556676631 12
Q ss_pred HHHHhCCCeEEEeeccCCCCCCCChhHHHhh-----cCCCceEEEe-cCC--CCccccCCCHHHHHHHHHHHhhcCcEEE
Q 014936 139 LSAAFRHIEVRHFDLLPDKGWEVDLDDIESL-----ADQNTVALVI-INP--GNPCGNVYSYQHLQKLAETANKLKTLVI 210 (415)
Q Consensus 139 ~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~-----~~~~~~~v~i-~~p--~nptG~~~~~~~l~~i~~~~~~~~~~li 210 (415)
+....+..++..+.+..+.+|.+.++..-++ .+..+..--. ..+ ..|.|-.++.+++++|++.|+++++-||
T Consensus 162 D~MA~~KlN~lH~HltDdqgwriei~~yP~Lt~~Ga~r~~t~~g~~~~~~~~~~~~~g~YT~~di~eIv~YA~~rgI~VI 241 (543)
T 3rcn_A 162 EVMAMHKLNVLHLHLTDDQGWRMQINRYPKLTETGAWRRESSLGSWRAGVFDGRPHGGFYTQDDLREIVAFAADRHITVI 241 (543)
T ss_dssp HHHHHTTCCEEEEECEETTEECBCCSSCTHHHHTTTEESCCBSSCGGGCCBCCCCEECCBCHHHHHHHHHHHHHTTCEEE
T ss_pred HHHHHcCCcEEEeecccccCcchhcccchhhhhhccccccccccccccccccCCccCCCcCHHHHHHHHHHHHHcCCEEe
Confidence 3344566777666654444455543332111 1111100000 001 2345778999999999999999999888
No 406
>2whl_A Beta-mannanase, baman5; glycoside hydrolase, hydrolase; HET: MAN BMA; 1.40A {Bacillus agaradhaerens} PDB: 2whj_A
Probab=20.66 E-value=68 Score=27.58 Aligned_cols=23 Identities=13% Similarity=0.284 Sum_probs=20.6
Q ss_pred CHHHHHHHHHHHhhcCcEEEEcc
Q 014936 191 SYQHLQKLAETANKLKTLVIADE 213 (415)
Q Consensus 191 ~~~~l~~i~~~~~~~~~~li~De 213 (415)
..+.+++++++|.++|+.+|+|-
T Consensus 62 ~~~~ld~~v~~a~~~Gi~Vild~ 84 (294)
T 2whl_A 62 DIDTIREVIELAEQNKMVAVVEV 84 (294)
T ss_dssp CHHHHHHHHHHHHTTTCEEEEEE
T ss_pred HHHHHHHHHHHHHHCCCEEEEEe
Confidence 35889999999999999999984
No 407
>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*
Probab=20.58 E-value=3.7e+02 Score=22.41 Aligned_cols=65 Identities=14% Similarity=0.035 Sum_probs=31.7
Q ss_pred CcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHH---HHhCCCeEEEeeccCCCCCCCChhHHHhhc
Q 014936 101 NDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELS---AAFRHIEVRHFDLLPDKGWEVDLDDIESLA 170 (415)
Q Consensus 101 ~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~---~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~ 170 (415)
..++||.++...=..+...|.+.|.+|++..-.-...... ++..|.++..+..+. -|.+.+++.+
T Consensus 23 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv-----~~~~~v~~~~ 90 (277)
T 2rhc_B 23 EVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDV-----RSVPEIEALV 90 (277)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCT-----TCHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCC-----CCHHHHHHHH
Confidence 4456665544433445555667788877653222212221 223355565555432 2455555444
No 408
>2nuw_A 2-keto-3-deoxygluconate/2-keto-3-deoxy-6-phospho aldolase; TIM barrel, lyase; 1.80A {Sulfolobus acidocaldarius dsm 639} PDB: 2nux_A 2nuy_A
Probab=20.52 E-value=4e+02 Score=22.71 Aligned_cols=51 Identities=10% Similarity=-0.003 Sum_probs=30.5
Q ss_pred HHHHHHHHHHHhhhCCCCCCCCcEEEeCCh---HHHHHHHHHHhcCCCCEEEEcCCCCcc
Q 014936 80 PLTRRAIAEYLSRDLPYKLTPNDVFVTSGC---TQAIDVAMALLSRPGANILLPRPGFPI 136 (415)
Q Consensus 80 ~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~---~~al~~~~~~l~~~gd~vi~~~p~y~~ 136 (415)
.+=|+++.+...+. ... |++..|+ .+++..+-.+-.-.-|.|++..|.|..
T Consensus 51 ~eEr~~v~~~~~~~-----~~g-ViaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y~~ 104 (288)
T 2nuw_A 51 KDEKRQNLNALYDV-----THK-LIFQVGSLNLNDVMELVKFSNEMDILGVSSHSPYYFP 104 (288)
T ss_dssp HHHHHHHHHHHTTT-----CSC-EEEECCCSCHHHHHHHHHHHHTSCCSEEEECCCCSSC
T ss_pred HHHHHHHHHHHHHH-----hCC-eEEeeCCCCHHHHHHHHHHHHhcCCCEEEEcCCcCCC
Confidence 55666777766431 122 7766554 566665544433233889999998865
No 409
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*
Probab=20.47 E-value=3.5e+02 Score=22.06 Aligned_cols=65 Identities=11% Similarity=0.117 Sum_probs=32.5
Q ss_pred CcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHH---HHhCCCeEEEeeccCCCCCCCChhHHHhhc
Q 014936 101 NDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELS---AAFRHIEVRHFDLLPDKGWEVDLDDIESLA 170 (415)
Q Consensus 101 ~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~---~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~ 170 (415)
..+++|.++...=..+...|.+.|.+|++..-.-...... +...|.++..+..+- -|.+.+++.+
T Consensus 8 k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv-----~~~~~~~~~~ 75 (247)
T 2jah_A 8 KVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAGAKVHVLELDV-----ADRQGVDAAV 75 (247)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCT-----TCHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCC-----CCHHHHHHHH
Confidence 4566665554444445556667788877653222222222 222355666655432 2455555444
No 410
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=20.46 E-value=3.6e+02 Score=23.75 Aligned_cols=53 Identities=17% Similarity=0.278 Sum_probs=28.1
Q ss_pred HHHHHHHHHHHhhhCCCCCCCCcEEEeCC---hHHHHHHHHHHhcCCCCEEEEcCCCCc
Q 014936 80 PLTRRAIAEYLSRDLPYKLTPNDVFVTSG---CTQAIDVAMALLSRPGANILLPRPGFP 135 (415)
Q Consensus 80 ~~lr~~ia~~~~~~~~~~~~~~~i~i~~g---~~~al~~~~~~l~~~gd~vi~~~p~y~ 135 (415)
.+=|+++.+...+.-+ ..--|++..| +.+++..+-.+-.-.-|.|++..|.|.
T Consensus 83 ~eEr~~vi~~~ve~~~---grvpViaGvg~~st~eai~la~~A~~~Gadavlv~~P~Y~ 138 (343)
T 2v9d_A 83 AEERKAIARFAIDHVD---RRVPVLIGTGGTNARETIELSQHAQQAGADGIVVINPYYW 138 (343)
T ss_dssp HHHHHHHHHHHHHHHT---TSSCEEEECCSSCHHHHHHHHHHHHHHTCSEEEEECCSSS
T ss_pred HHHHHHHHHHHHHHhC---CCCcEEEecCCCCHHHHHHHHHHHHhcCCCEEEECCCCCC
Confidence 4445555555543211 1123555544 456666554443223388888888885
No 411
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=20.44 E-value=4.1e+02 Score=22.78 Aligned_cols=54 Identities=17% Similarity=0.145 Sum_probs=29.5
Q ss_pred HHHHHHHHHHHhhhCCCCCCCCcEEEeCC---hHHHHHHHHHHhcCCCCEEEEcCCCCcc
Q 014936 80 PLTRRAIAEYLSRDLPYKLTPNDVFVTSG---CTQAIDVAMALLSRPGANILLPRPGFPI 136 (415)
Q Consensus 80 ~~lr~~ia~~~~~~~~~~~~~~~i~i~~g---~~~al~~~~~~l~~~gd~vi~~~p~y~~ 136 (415)
.+=|+++.+...+.-+ ..--|++..| +.+++..+-.+-.-.-|.|++..|.|..
T Consensus 59 ~~Er~~v~~~~~~~~~---grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y~~ 115 (297)
T 3flu_A 59 VEEHTAVIEAVVKHVA---KRVPVIAGTGANNTVEAIALSQAAEKAGADYTLSVVPYYNK 115 (297)
T ss_dssp HHHHHHHHHHHHHHHT---TSSCEEEECCCSSHHHHHHHHHHHHHTTCSEEEEECCCSSC
T ss_pred HHHHHHHHHHHHHHhC---CCCcEEEeCCCcCHHHHHHHHHHHHHcCCCEEEECCCCCCC
Confidence 4555555555543211 1224555444 4566665544443334889999998863
No 412
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=20.39 E-value=3.8e+02 Score=22.42 Aligned_cols=67 Identities=9% Similarity=0.010 Sum_probs=35.4
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHH---HHhCCCeEEEeeccCCCCCCCChhHHHhhc
Q 014936 99 TPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELS---AAFRHIEVRHFDLLPDKGWEVDLDDIESLA 170 (415)
Q Consensus 99 ~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~---~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~ 170 (415)
....++||.++...=..+.+.|.+.|.+|++..-.-...... +...+.++..+..+. -|.+.+++.+
T Consensus 31 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl-----~d~~~v~~~~ 100 (276)
T 3r1i_A 31 SGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGGKALPIRCDV-----TQPDQVRGML 100 (276)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCCCEEEECCT-----TCHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCC-----CCHHHHHHHH
Confidence 444566666554444445556677888887764433332222 334455666665432 2455555544
No 413
>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*
Probab=20.35 E-value=2.8e+02 Score=22.81 Aligned_cols=53 Identities=13% Similarity=0.046 Sum_probs=25.8
Q ss_pred cEEEeCChHHHHHHHHHHhcC---CCCEEEEcCCCCcchHHHHHhC-----CCeEEEeecc
Q 014936 102 DVFVTSGCTQAIDVAMALLSR---PGANILLPRPGFPIYELSAAFR-----HIEVRHFDLL 154 (415)
Q Consensus 102 ~i~i~~g~~~al~~~~~~l~~---~gd~vi~~~p~y~~~~~~~~~~-----g~~~~~~~~~ 154 (415)
.+++|.++...=..+...|.+ .|.+|++..-.-.......... +.++..+..+
T Consensus 8 ~~lVTGas~gIG~~ia~~l~~~~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D 68 (259)
T 1oaa_A 8 VCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAAD 68 (259)
T ss_dssp EEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECC
T ss_pred EEEEeCCCChHHHHHHHHHHHhhcCCCeEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEecC
Confidence 455555444333444455666 7888877543222222222211 5566666553
No 414
>3mfq_A TROA, high-affinity zinc uptake system protein ZNUA; metal binding protein; 2.60A {Streptococcus suis} SCOP: c.92.2.0
Probab=20.33 E-value=84 Score=26.99 Aligned_cols=76 Identities=13% Similarity=0.112 Sum_probs=42.3
Q ss_pred CEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhc---CCCceEEEecCCCCccccCCCHHHHHHHHHH
Q 014936 125 ANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLA---DQNTVALVIINPGNPCGNVYSYQHLQKLAET 201 (415)
Q Consensus 125 d~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~---~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~ 201 (415)
..+++..+ .+.-+++.+|++...+.-. ..+..+++..|.+.+ +.+...++++.++.+. .-.+.|.+.
T Consensus 164 ~~~vt~H~---af~Y~~~~yGl~~~~~~~~-~~~~eps~~~l~~l~~~ik~~~v~~if~e~~~~~------~~~~~l~~~ 233 (282)
T 3mfq_A 164 RYLVTPHD---AFNYFAASYDFTLYAPQGV-STDSEVANSDMIETVNLIIDHNIKAIFTESTTNP------ERMKKLQEA 233 (282)
T ss_dssp CEEECSSS---CCHHHHHHTTCEEECSSCS-SSCSCCCHHHHHHHHHHHHHHTCCEEECBTTSCT------HHHHHHHHH
T ss_pred cEEEEECc---hHHHHHHHCCCeEeccccc-CCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCCh------HHHHHHHHH
Confidence 34444444 4556778899997654311 122346666665543 3333334455664433 446778888
Q ss_pred HhhcCcEEE
Q 014936 202 ANKLKTLVI 210 (415)
Q Consensus 202 ~~~~~~~li 210 (415)
+++.|+.++
T Consensus 234 a~~~g~~v~ 242 (282)
T 3mfq_A 234 VKAKGGQVE 242 (282)
T ss_dssp HHTTSCCCE
T ss_pred HHhcCCceE
Confidence 888886544
No 415
>1x92_A APC5045, phosphoheptose isomerase; midwest centre for structural genomics, SIS domain, A/B protein, lipopolysaccharide biosynthesis, PSI; HET: M7P; 2.30A {Pseudomonas aeruginosa} SCOP: c.80.1.3 PDB: 3bjz_A
Probab=20.26 E-value=3.2e+02 Score=21.43 Aligned_cols=39 Identities=26% Similarity=0.399 Sum_probs=25.8
Q ss_pred HHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEE
Q 014936 165 DIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVI 210 (415)
Q Consensus 165 ~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li 210 (415)
.+...++++..+++++.. |.. .++.++++.++++|+.+|
T Consensus 106 ~~~~~~~~~DvvI~iS~S----G~t---~~~i~~~~~ak~~g~~vI 144 (199)
T 1x92_A 106 QIRALGQPGDVLLAISTS----GNS---ANVIQAIQAAHDREMLVV 144 (199)
T ss_dssp HHHHHCCTTCEEEEECSS----SCC---HHHHHHHHHHHHTTCEEE
T ss_pred HHHhCCCCCCEEEEEeCC----CCC---HHHHHHHHHHHHCCCEEE
Confidence 444455666666666653 333 678889999999987654
No 416
>1qys_A TOP7; alpha-beta, novel fold, de novo protein; 2.50A {Computationally designed sequence} SCOP: k.41.1.1
Probab=20.13 E-value=1.5e+02 Score=19.47 Aligned_cols=28 Identities=11% Similarity=0.150 Sum_probs=21.1
Q ss_pred CeEEEEe-eCChhhHHHHHHHHHHHHHHH
Q 014936 381 NWLRVTF-AVDPYSLEECLDRIKSFYQRH 408 (415)
Q Consensus 381 ~~iRi~~-~~~~~~l~~~l~~l~~~~~~~ 408 (415)
..+|||+ +.+..+-++....|-+++.++
T Consensus 46 krvrisitartkkeaekfaailikvfael 74 (106)
T 1qys_A 46 KRVRISITARTKKEAEKFAAILIKVFAEL 74 (106)
T ss_dssp SEEEEEEECSSHHHHHHHHHHHHHHHHHT
T ss_pred cEEEEEEEecchhHHHHHHHHHHHHHHHh
Confidence 5789999 567777788877777776654
No 417
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=20.06 E-value=5.1e+02 Score=23.80 Aligned_cols=96 Identities=19% Similarity=0.168 Sum_probs=55.3
Q ss_pred CCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcch-HHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceE
Q 014936 98 LTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIY-ELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVA 176 (415)
Q Consensus 98 ~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~-~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 176 (415)
.....+++..||..+...+- .|.+.|..|.+.+|....- .......++.+.. - . ...+.++. ..
T Consensus 10 l~~~~vlVvGgG~va~~k~~-~L~~~ga~V~vi~~~~~~~~~~l~~~~~i~~~~--~----~--~~~~~l~~-----~~- 74 (457)
T 1pjq_A 10 LRDRDCLIVGGGDVAERKAR-LLLEAGARLTVNALTFIPQFTVWANEGMLTLVE--G----P--FDETLLDS-----CW- 74 (457)
T ss_dssp CBTCEEEEECCSHHHHHHHH-HHHHTTBEEEEEESSCCHHHHHHHTTTSCEEEE--S----S--CCGGGGTT-----CS-
T ss_pred CCCCEEEEECCCHHHHHHHH-HHHhCcCEEEEEcCCCCHHHHHHHhcCCEEEEE--C----C--CCccccCC-----cc-
Confidence 45568888888888877554 5556788888777765432 2222222333322 1 1 22333321 22
Q ss_pred EEecCCCCccccCCCHHHHHHHHHHHhhcCcEE-EEcccc
Q 014936 177 LVIINPGNPCGNVYSYQHLQKLAETANKLKTLV-IADEVY 215 (415)
Q Consensus 177 v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~l-i~De~~ 215 (415)
+++..|.+| +.=..+++.|+++|+++ ++|+.-
T Consensus 75 lVi~at~~~-------~~n~~i~~~a~~~~i~vn~~d~~e 107 (457)
T 1pjq_A 75 LAIAATDDD-------TVNQRVSDAAESRRIFCNVVDAPK 107 (457)
T ss_dssp EEEECCSCH-------HHHHHHHHHHHHTTCEEEETTCTT
T ss_pred EEEEcCCCH-------HHHHHHHHHHHHcCCEEEECCCcc
Confidence 455565543 22467888899999886 567654
Done!