BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>014940
MPKTLLYLLLLFSNAAMVLVTPKSTIEPCSNSDSCSALLGYTLYTDLKVSEVGSLFNVDP
VSILTANAIDISYSDVENHILPSQLFVRIPVTCACVDGIRKSVSTHYKTRPSDTLTSIAN
QVYAGLVSADQLREANDIQDPDVLDVGVNLLVPLPCTCFNGTDNSLPAVYLSYVVKDVDT
LAGIAARYRTTLTDLMNANAMGSTAVKAGDILAVPLPACATNFPRYALDHGLIVPNGSYA
ITASHCVQCSCGPGNLNLYCMPASLAVSCSSMQCKNSNLMLGNVTTQRSSAGCNVTSCSY
GGFVNGTIVTMLSTSLQPRCPGPQQFPPLIAPPSSVTRDSTFAPSPAPQSDGAGPAGATT
PKSSVVPSSGSIPGLPPASGPSGSVSSACSLTNSLSTFPPAFMLYLFVKFIVSIS

High Scoring Gene Products

Symbol, full name Information P value
LYP2
LysM-containing receptor protein 2
protein from Arabidopsis thaliana 7.0e-143
LYM3
lysin-motif (LysM) domain protein 3
protein from Arabidopsis thaliana 1.8e-126
LYP1
AT2G17120
protein from Arabidopsis thaliana 2.2e-34
CEBIP
Chitin elicitor-binding protein
protein from Oryza sativa Japonica Group 9.8e-32
LYK4
LysM-containing receptor-like kinase 4
protein from Arabidopsis thaliana 1.6e-09
LYK5
LysM-containing receptor-like kinase 5
protein from Arabidopsis thaliana 8.5e-07
LYK2
LysM-containing receptor-like kinase 2
protein from Arabidopsis thaliana 7.7e-05

Back to top

Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  014940
        (415 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2201143 - symbol:LYP2 "LysM-containing recepto...  1374  7.0e-143  2
TAIR|locus:2204720 - symbol:LYM3 "lysin-motif (LysM) doma...  1242  1.8e-126  1
TAIR|locus:2827686 - symbol:LYP1 "LysM-containing recepto...   373  2.2e-34   1
UNIPROTKB|Q8H8C7 - symbol:CEBIP "Chitin elicitor-binding ...   348  9.8e-32   1
TAIR|locus:2049029 - symbol:LYK4 "LysM-containing recepto...   169  1.6e-09   1
TAIR|locus:2050987 - symbol:LYK5 "LysM-containing recepto...   148  8.5e-07   2
TAIR|locus:2082359 - symbol:LYK2 "LysM-containing recepto...   127  7.7e-05   1


>TAIR|locus:2201143 [details] [associations]
            symbol:LYP2 "LysM-containing receptor protein 2"
            species:3702 "Arabidopsis thaliana" [GO:0005886 "plasma membrane"
            evidence=ISM;IDA] [GO:0016998 "cell wall macromolecule catabolic
            process" evidence=IEA;ISS] [GO:0031225 "anchored to membrane"
            evidence=TAS] [GO:0046658 "anchored to plasma membrane"
            evidence=IDA] [GO:0006955 "immune response" evidence=IMP]
            [GO:0042834 "peptidoglycan binding" evidence=IDA] [GO:0009909
            "regulation of flower development" evidence=RCA] [GO:0016570
            "histone modification" evidence=RCA] [GO:0048449 "floral organ
            formation" evidence=RCA] InterPro:IPR002482 InterPro:IPR018392
            Pfam:PF01476 SMART:SM00257 EMBL:CP002684 GenomeReviews:CT485782_GR
            GO:GO:0005576 GO:GO:0006955 GO:GO:0006952 GO:GO:0042834
            GO:GO:0046658 GO:GO:0016998 EMBL:AC013482 EMBL:AY057542
            IPI:IPI00535769 IPI:IPI00539017 PIR:B86352 RefSeq:NP_564153.1
            RefSeq:NP_849697.1 UniGene:At.25611 UniGene:At.48217
            ProteinModelPortal:Q93ZH0 SMR:Q93ZH0 STRING:Q93ZH0 PaxDb:Q93ZH0
            PRIDE:Q93ZH0 EnsemblPlants:AT1G21880.2 GeneID:838790
            KEGG:ath:AT1G21880 TAIR:At1g21880 eggNOG:NOG305960
            HOGENOM:HOG000083326 InParanoid:Q93ZH0 OMA:SAGCNVT PhylomeDB:Q93ZH0
            ProtClustDB:CLSN2714457 Genevestigator:Q93ZH0 GermOnline:AT1G21880
            Uniprot:Q93ZH0
        Length = 416

 Score = 1374 (488.7 bits), Expect = 7.0e-143, Sum P(2) = 7.0e-143
 Identities = 250/334 (74%), Positives = 289/334 (86%)

Query:    21 TPKSTIEPCSNSDSCSALLGYTLYTDLKVSEVGSLFNVDPVSILTANAIDISYSDVENHI 80
             T KSTIEPCS++D+C+ALLGYTLYTDLKVSEV SLF VDP+SIL ANAIDISY DVENHI
Sbjct:    26 TAKSTIEPCSSNDTCNALLGYTLYTDLKVSEVASLFQVDPISILLANAIDISYPDVENHI 85

Query:    81 LPSQLFVRIPVTCACVDGIRKSVSTHYKTRPSDTLTSIANQVYAGLVSADQLREANDIQD 140
             LPS+LF++IP+TC+CVDGIRKSVSTHYKTRPSD L SIA+ VY GLVSA+Q++EAN + D
Sbjct:    86 LPSKLFLKIPITCSCVDGIRKSVSTHYKTRPSDNLGSIADSVYGGLVSAEQIQEANSVND 145

Query:   141 PDVLDVGVNLLVPLPCTCFNGTDNSLPAVYLSYVVKDVDTLAGIAARYRTTLTDLMNANA 200
             P +LDVG +L++PLPC CFNGTDNSLPAVYLSYVVK++DTL GIA RY TT+TDLMN NA
Sbjct:   146 PSLLDVGTSLVIPLPCACFNGTDNSLPAVYLSYVVKEIDTLVGIARRYSTTITDLMNVNA 205

Query:   201 MGSTAVKAGDILAVPLPACATNFPRYALDHGLIVPNGSYAITASHCVQCSCGPGNLNLYC 260
             MG+  V +GDILAVPL ACA+ FPRYA D GLIVPNGSYA+ A HCVQCSC  G+ NLYC
Sbjct:   206 MGAPDVSSGDILAVPLSACASKFPRYASDFGLIVPNGSYALAAGHCVQCSCALGSRNLYC 265

Query:   261 MPASLAVSCSSMQCKNSNLMLGNVTTQRSSAGCNVTSCSYGGFVNGTIVTMLSTSLQPRC 320
              PASLAVSCSSMQC+NSNLMLGN+T Q++SAGCNVT+C Y G  NGTI+TML+ SLQPRC
Sbjct:   266 EPASLAVSCSSMQCRNSNLMLGNITVQQTSAGCNVTTCDYNGIANGTILTMLTRSLQPRC 325

Query:   321 PGPQQFPPLIAPPSSVTRDSTFAPSPAPQSDGAG 354
             PGPQQF PL+APP +V RD  +AP+P+P  DG G
Sbjct:   326 PGPQQFAPLLAPPDTVPRDVMYAPAPSPDFDGPG 359

 Score = 44 (20.5 bits), Expect = 7.0e-143, Sum P(2) = 7.0e-143
 Identities = 8/22 (36%), Positives = 15/22 (68%)

Query:   394 SLSTFPPAFMLYLFVKFIVSIS 415
             S+ST   + + Y F+ F++SI+
Sbjct:   387 SISTASASSVSYFFITFLISIA 408


>TAIR|locus:2204720 [details] [associations]
            symbol:LYM3 "lysin-motif (LysM) domain protein 3"
            species:3702 "Arabidopsis thaliana" [GO:0005886 "plasma membrane"
            evidence=ISM;IDA] [GO:0016998 "cell wall macromolecule catabolic
            process" evidence=IEA;ISS] [GO:0031225 "anchored to membrane"
            evidence=TAS] [GO:0046658 "anchored to plasma membrane"
            evidence=IDA] [GO:0006955 "immune response" evidence=IMP]
            [GO:0042834 "peptidoglycan binding" evidence=IDA] [GO:0009664
            "plant-type cell wall organization" evidence=RCA] [GO:0042545 "cell
            wall modification" evidence=RCA] InterPro:IPR002482
            InterPro:IPR018392 Pfam:PF01476 SMART:SM00257 EMBL:CP002684
            GenomeReviews:CT485782_GR GO:GO:0006955 GO:GO:0006952 EMBL:AC010704
            GO:GO:0042834 GO:GO:0046658 GO:GO:0016998 HOGENOM:HOG000083326
            ProtClustDB:CLSN2714457 EMBL:BT010885 EMBL:AK176769 IPI:IPI00520912
            PIR:H96805 RefSeq:NP_177886.2 UniGene:At.24354
            ProteinModelPortal:Q6NPN4 SMR:Q6NPN4 PaxDb:Q6NPN4 PRIDE:Q6NPN4
            EnsemblPlants:AT1G77630.1 GeneID:844098 KEGG:ath:AT1G77630
            TAIR:At1g77630 eggNOG:NOG309651 InParanoid:Q6NPN4 OMA:YCEPASI
            PhylomeDB:Q6NPN4 Genevestigator:Q6NPN4 GermOnline:AT1G77630
            Uniprot:Q6NPN4
        Length = 423

 Score = 1242 (442.3 bits), Expect = 1.8e-126, P = 1.8e-126
 Identities = 221/330 (66%), Positives = 279/330 (84%)

Query:    19 LVTPKSTIEPCSNSDSCSALLGYTLYTDLKVSEVGSLFNVDPVSILTANAIDISYSDVEN 78
             + T KSTIEPCS+ D+C++LLGYTLYTDLKV+EV SLF VDPVS+L +N+IDISY DVEN
Sbjct:    21 MATAKSTIEPCSSKDTCNSLLGYTLYTDLKVTEVASLFQVDPVSMLLSNSIDISYPDVEN 80

Query:    79 HILPSQLFVRIPVTCACVDGIRKSVSTHYKTRPSDTLTSIANQVYAGLVSADQLREANDI 138
             H+LP++LF++IP+TC+CVDGIRKS+STHYKTR SDTL SIA+ VY GLVS +Q++ AN  
Sbjct:    81 HVLPAKLFLKIPITCSCVDGIRKSLSTHYKTRTSDTLGSIADSVYGGLVSPEQIQVANSE 140

Query:   139 QDPDVLDVGVNLLVPLPCTCFNGTDNSLPAVYLSYVVKDVDTLAGIAARYRTTLTDLMNA 198
              D  VLDVG  L++PLPC CFNGTD SLPA+YLSYVV+ +DT+AGIA R+ T++TDL N 
Sbjct:   141 TDLSVLDVGTKLVIPLPCACFNGTDESLPALYLSYVVRGIDTMAGIAKRFSTSVTDLTNV 200

Query:   199 NAMGSTAVKAGDILAVPLPACATNFPRYALDHGLIVPNGSYAITASHCVQCSCGPGNLNL 258
             NAMG+  +  GDILAVPL AC++NFP+YA D+GLI+PNGSYA+TA HCVQCSC  G+ ++
Sbjct:   201 NAMGAPDINPGDILAVPLLACSSNFPKYATDYGLIIPNGSYALTAGHCVQCSCVLGSRSM 260

Query:   259 YCMPASLAVSCSSMQCKNSNLMLGNVTTQRSSAGCNVTSCSYGGFVNGTIVTMLSTSLQP 318
             YC PAS++VSCSSM+C+NSN MLGN+T+Q+SS+GC +T+CSY GF +GTI+T LS SLQP
Sbjct:   261 YCEPASISVSCSSMRCRNSNFMLGNITSQQSSSGCKLTTCSYNGFASGTILTTLSMSLQP 320

Query:   319 RCPGPQQFPPLIAPPSSVTRDSTFAPSPAP 348
             RCPGPQQ  PLIAPP +V ++  + PSP+P
Sbjct:   321 RCPGPQQLAPLIAPPDNVPKELMYLPSPSP 350


>TAIR|locus:2827686 [details] [associations]
            symbol:LYP1 "LysM-containing receptor protein 1"
            species:3702 "Arabidopsis thaliana" [GO:0016998 "cell wall
            macromolecule catabolic process" evidence=IEA;ISS] [GO:0031225
            "anchored to membrane" evidence=TAS] [GO:0046658 "anchored to
            plasma membrane" evidence=IDA] [GO:0005886 "plasma membrane"
            evidence=IDA] [GO:0009506 "plasmodesma" evidence=IDA] [GO:0009627
            "systemic acquired resistance" evidence=RCA] [GO:0034976 "response
            to endoplasmic reticulum stress" evidence=RCA] [GO:0008061 "chitin
            binding" evidence=IDA] InterPro:IPR002482 InterPro:IPR018392
            Pfam:PF01476 SMART:SM00257 GO:GO:0009506 EMBL:CP002685
            GenomeReviews:CT485783_GR GO:GO:0006952 GO:GO:0008061 GO:GO:0046658
            eggNOG:NOG329912 HOGENOM:HOG000239699 GO:GO:0016998
            UniGene:At.12294 UniGene:At.48484 EMBL:AF428464 EMBL:AY056221
            EMBL:AY125560 EMBL:AY088373 IPI:IPI00521359 PIR:C84548
            RefSeq:NP_565406.1 ProteinModelPortal:O23006 SMR:O23006
            PaxDb:O23006 PRIDE:O23006 EnsemblPlants:AT2G17120.1 GeneID:816217
            KEGG:ath:AT2G17120 TAIR:At2g17120 InParanoid:O23006 OMA:DVPLRAC
            PhylomeDB:O23006 ProtClustDB:CLSN2715733 Genevestigator:O23006
            GermOnline:AT2G17120 Uniprot:O23006
        Length = 350

 Score = 373 (136.4 bits), Expect = 2.2e-34, P = 2.2e-34
 Identities = 102/310 (32%), Positives = 164/310 (52%)

Query:    29 CSNSDS-CSALLGYTLYTDLKVSEVGSLFNVDPV-SILTANAIDISYSDVENHILPSQLF 86
             CS S S C +L+GY+      +  + +LF V  + SIL AN + ++ S  +  + P+Q+ 
Sbjct:    31 CSGSTSTCQSLVGYSSKNATTLRNIQTLFAVKNLRSILGANNLPLNTSR-DQRVNPNQV- 88

Query:    87 VRIPVTCACVDGIRKSV-STHYKTRPSDTLTSIANQVYAGLVSADQLREANDIQDPDVLD 145
             VR+P+ C+C +G   S     Y  +  D L+ +A +++ GLV+ +++ E N I DP+ ++
Sbjct:    89 VRVPIHCSCSNGTGVSNRDIEYTIKKDDILSFVATEIFGGLVTYEKISEVNKIPDPNKIE 148

Query:   146 VGVNLLVPLPCTC--FNGTDNSLPAVYLSYVVKDVDTLAGIAARYRTTLTDLMNANAM-G 202
             +G    +PLPC+C   NG D     V+ ++VVK   +L  IAA++ T  T L   N + G
Sbjct:   149 IGQKFWIPLPCSCDKLNGED----VVHYAHVVKLGSSLGEIAAQFGTDNTTLAQLNGIIG 204

Query:   203 STAVKAGDILAVPLPACATNFPRYALDHGLIVPNGSYAITASHCVQCSCGP-GNLNLYCM 261
              + + A   L VPL AC+++  + +LD  L++ N SY  TA++CV+C+C    N  L C 
Sbjct:   205 DSQLLADKPLDVPLKACSSSVRKDSLDAPLLLSNNSYVFTANNCVKCTCDALKNWTLSCQ 264

Query:   262 PASLAVSCSSMQ-CKNSNLMLGNVTTQRSSAGCNVT-SCSYGGFVNGTIVTMLSTSLQPR 319
              +S  +  S+ Q C   +   G +     +A C     C Y G+ N TI T  S    P 
Sbjct:   265 SSS-EIKPSNWQTCPPFSQCDGALL----NASCRQPRDCVYAGYSNQTIFTTAS----PA 315

Query:   320 CP---GPQQF 326
             CP   GP  +
Sbjct:   316 CPDSAGPDNY 325


>UNIPROTKB|Q8H8C7 [details] [associations]
            symbol:CEBIP "Chitin elicitor-binding protein"
            species:39947 "Oryza sativa Japonica Group" [GO:0005515 "protein
            binding" evidence=IPI] [GO:0043621 "protein self-association"
            evidence=IDA] InterPro:IPR002482 InterPro:IPR018392 Pfam:PF01476
            SMART:SM00257 GO:GO:0016021 GO:GO:0005886 GO:GO:0006952
            EMBL:DP000009 EMBL:AP008209 GO:GO:0043621 GO:GO:0008061
            EMBL:CM000146 EMBL:AB206975 EMBL:AC099399 EMBL:AK073032
            RefSeq:NP_001048875.1 UniGene:Os.11983 ProteinModelPortal:Q8H8C7
            STRING:Q8H8C7 EnsemblPlants:LOC_Os03g04110.1 GeneID:4331523
            KEGG:dosa:Os03t0133400-01 KEGG:osa:4331523 Gramene:Q8H8C7
            eggNOG:NOG329912 HOGENOM:HOG000239699 KO:K13473 OMA:LRIPLPC
            ProtClustDB:CLSN2693483 GO:GO:0016998 Uniprot:Q8H8C7
        Length = 356

 Score = 348 (127.6 bits), Expect = 9.8e-32, P = 9.8e-32
 Identities = 95/318 (29%), Positives = 158/318 (49%)

Query:    17 MVLVTPKSTIE-PCS--NSDSCSALLGYTLYTDLKVSEVGSL---FNVDPV-SILTANAI 69
             ++L  P S     C+  +  +C + +   LYT    +  G+L   FN   +  +L AN +
Sbjct:    20 VLLAAPASAANFTCAVASGTTCKSAI---LYTSPNATTYGNLVARFNTTTLPDLLGANGL 76

Query:    70 -DISYSDVENHILPSQLFVRIPVTCACVDGIRKSVSTH-YKTRPSDTLTSIANQVYAGLV 127
              D + S      + +   V+IP  C C   + +S     Y  +P D L +IA  V+   V
Sbjct:    77 PDGTLSSAP---VAANSTVKIPFRCRCNGDVGQSDRLPIYVVQPQDGLDAIARNVFNAFV 133

Query:   128 SADQLREANDIQDPDVLDVGVNLLVPLPCTCFNGTDNSLPAVYLSYVVKDVDTLAGIAAR 187
             +  ++  AN+I DP+ ++V   L +PLPC+C     +++  ++L+Y V   +  + IAA+
Sbjct:   134 TYQEIAAANNIPDPNKINVSQTLWIPLPCSCDKEEGSNV--MHLAYSVGKGENTSAIAAK 191

Query:   188 YRTTLTDLMNANAMGS-TAVKAGDILAVPLPACATNFPRYALDHGL-IVPNGSYAITASH 245
             Y  T + L+  N +   T ++ G IL VPLP C ++    + DH L ++P+G+Y  TA +
Sbjct:   192 YGVTESTLLTRNKIDDPTKLQMGQILDVPLPVCRSSISDTSADHNLMLLPDGTYGFTAGN 251

Query:   246 CVQCSCGPGNLNLYCMPASLAVSCSSMQCKNSNLMLGNVTTQRSSAGCNVTSCSYGGFVN 305
             C++CSC      L C  A     C S+   N  L LG    + +  GC  T+C+Y G+ N
Sbjct:   252 CIRCSCSSTTYQLNCT-AVQNKGCPSVPLCNGTLKLG----ETNGTGCGSTTCAYSGYSN 306

Query:   306 GT---IVTMLSTSLQPRC 320
              +   I T L+T+    C
Sbjct:   307 SSSLIIQTSLATNQTTAC 324


>TAIR|locus:2049029 [details] [associations]
            symbol:LYK4 "LysM-containing receptor-like kinase 4"
            species:3702 "Arabidopsis thaliana" [GO:0009507 "chloroplast"
            evidence=ISM] [GO:0016301 "kinase activity" evidence=ISS]
            [GO:0005886 "plasma membrane" evidence=IDA] [GO:0008061 "chitin
            binding" evidence=IDA] [GO:0045087 "innate immune response"
            evidence=IMP] [GO:0071219 "cellular response to molecule of
            bacterial origin" evidence=IEP] [GO:0071323 "cellular response to
            chitin" evidence=IEP] InterPro:IPR000719 InterPro:IPR001245
            InterPro:IPR002482 InterPro:IPR007110 InterPro:IPR011009
            InterPro:IPR018392 Pfam:PF01476 Pfam:PF07714 PROSITE:PS00107
            PROSITE:PS50011 SMART:SM00257 GO:GO:0016021 GO:GO:0005886
            GO:GO:0005524 EMBL:CP002685 GenomeReviews:CT485783_GR
            eggNOG:COG0515 SUPFAM:SSF56112 GO:GO:0045087 Gene3D:2.60.120.200
            InterPro:IPR013320 GO:GO:0004672 GO:GO:0071219 GO:GO:0008061
            EMBL:AC004482 GO:GO:0016998 GO:GO:0071323 IPI:IPI00520503
            PIR:T02414 RefSeq:NP_179957.1 UniGene:At.39248
            ProteinModelPortal:O64825 SMR:O64825 PaxDb:O64825 PRIDE:O64825
            EnsemblPlants:AT2G23770.1 GeneID:816909 KEGG:ath:AT2G23770
            GeneFarm:2738 TAIR:At2g23770 HOGENOM:HOG000238861 InParanoid:O64825
            OMA:YFAIAND PhylomeDB:O64825 ProtClustDB:CLSN2683013
            Genevestigator:O64825 Uniprot:O64825
        Length = 612

 Score = 169 (64.5 bits), Expect = 1.6e-09, P = 1.6e-09
 Identities = 55/180 (30%), Positives = 86/180 (47%)

Query:    49 VSEVGSLFNVDPVSILTANAIDISYSDVENHILPSQLFVRIPVTCACVDGIRKSVSTHYK 108
             V+ + SLF+VDP  + + N    S S       PS   V IP+TC+C     +S  T Y 
Sbjct:    70 VTSISSLFSVDPSLVSSLNDASPSTS------FPSGQQVIIPLTCSCTGDDSQSNIT-YT 122

Query:   109 TRPSDTLTSIANQVYAGLVSADQLREANDIQDPDVLDVGVNLLVPLPCTCFNGTDNSLPA 168
              +P+D+  +IAN    GL +   L + N++    +   G+ ++VP+ C C      +   
Sbjct:   123 IQPNDSYFAIANDTLQGLSTCQALAKQNNVSSQSLFP-GMRIVVPIRCACPTAKQINEDG 181

Query:   169 V-YL-SYVVKDVDTLAGIAARYRTTLTDLMNANAMG--STAVKAGDILAVPL--PACATN 222
             V YL SY V   DT+A I+ R+    +  + AN M   ++ V     + +PL  P   TN
Sbjct:   182 VKYLMSYTVVFEDTIAIISDRFGVETSKTLKANEMSFENSEVFPFTTILIPLVNPPANTN 241


>TAIR|locus:2050987 [details] [associations]
            symbol:LYK5 "LysM-containing receptor-like kinase 5"
            species:3702 "Arabidopsis thaliana" [GO:0005576 "extracellular
            region" evidence=ISM] [GO:0016301 "kinase activity" evidence=ISS]
            [GO:0005886 "plasma membrane" evidence=IDA] [GO:0010200 "response
            to chitin" evidence=RCA] [GO:0008061 "chitin binding" evidence=IDA]
            [GO:0071323 "cellular response to chitin" evidence=IEP]
            InterPro:IPR000719 InterPro:IPR011009 InterPro:IPR018392
            Pfam:PF00069 Pfam:PF01476 PROSITE:PS00107 PROSITE:PS50011
            GO:GO:0016021 GO:GO:0005886 GO:GO:0005524 EMBL:CP002685
            GenomeReviews:CT485783_GR eggNOG:COG0515 SUPFAM:SSF56112
            Gene3D:2.60.120.200 InterPro:IPR013320 GO:GO:0004672 GO:GO:0008061
            GO:GO:0016998 GO:GO:0071323 EMBL:AC002332 HOGENOM:HOG000238861
            EMBL:AF370600 EMBL:BT046191 IPI:IPI00525328 PIR:C84747
            RefSeq:NP_180916.1 UniGene:At.12134 ProteinModelPortal:O22808
            SMR:O22808 STRING:O22808 PaxDb:O22808 PRIDE:O22808
            EnsemblPlants:AT2G33580.1 GeneID:817923 KEGG:ath:AT2G33580
            GeneFarm:2737 TAIR:At2g33580 InParanoid:O22808 OMA:LTRHVVG
            PhylomeDB:O22808 ProtClustDB:CLSN2913107 Genevestigator:O22808
            Uniprot:O22808
        Length = 664

 Score = 148 (57.2 bits), Expect = 8.5e-07, Sum P(2) = 8.5e-07
 Identities = 49/195 (25%), Positives = 85/195 (43%)

Query:    29 CSNSDSCSALLGYTLYTDLKVSE-VGSLFNVDPVSILTANAIDISYSDVENHILPSQLFV 87
             C+   SC + L +        ++ +  L NV    I + N +  + + +     P++  V
Sbjct:    52 CNGPPSCRSYLTFWSQPPYNTADSIAKLLNVSAAEIQSINNLPTATTRI-----PTRELV 106

Query:    88 RIPVTCACVD---GIRKSVSTHYKT--RPSDTLTSIANQVYAGLVSADQLREANDIQDPD 142
              IP  C+C     G  +  +T+  +  R  +T  S+AN  Y  L +   +   N   +  
Sbjct:   107 VIPANCSCSSSSGGFYQHNATYNLSGNRGDETYFSVANDTYQALSTCQAMMSQNRYGERQ 166

Query:   143 VLDVGVNLLVPLPCTCFNGTDNSLPAVYL-SYVVKDVDTLAGIAARYRTTLTDLMNANAM 201
              L  G+NLLVPL C C      +    YL +Y+V   D+++GIA  + +T   +   N +
Sbjct:   167 -LTPGLNLLVPLRCACPTAKQTTAGFKYLLTYLVAMGDSISGIAEMFNSTSAAITEGNEL 225

Query:   202 GSTAVKAGDILAVPL 216
              S  +     + VPL
Sbjct:   226 TSDNIFFFTPVLVPL 240

 Score = 40 (19.1 bits), Expect = 8.5e-07, Sum P(2) = 8.5e-07
 Identities = 9/30 (30%), Positives = 14/30 (46%)

Query:   326 FPPLIAPPSSVTRDSTFAPSPAPQSDGAGP 355
             F P++ P ++       +PSP P    A P
Sbjct:   233 FTPVLVPLTTEPTKIVISPSPPPPPVVATP 262


>TAIR|locus:2082359 [details] [associations]
            symbol:LYK2 "LysM-containing receptor-like kinase 2"
            species:3702 "Arabidopsis thaliana" [GO:0004672 "protein kinase
            activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0006468 "protein phosphorylation" evidence=IEA] [GO:0009507
            "chloroplast" evidence=ISM] [GO:0016301 "kinase activity"
            evidence=ISS] [GO:0016772 "transferase activity, transferring
            phosphorus-containing groups" evidence=IEA] InterPro:IPR000719
            InterPro:IPR001245 InterPro:IPR011009 Pfam:PF07714 PROSITE:PS00107
            PROSITE:PS50011 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
            EMBL:CP002686 GenomeReviews:BA000014_GR SUPFAM:SSF56112
            GO:GO:0004672 EMBL:AC010797 UniGene:At.41224 IPI:IPI00541235
            RefSeq:NP_186833.1 UniGene:At.41222 ProteinModelPortal:Q9SGI7
            SMR:Q9SGI7 PRIDE:Q9SGI7 EnsemblPlants:AT3G01840.1 GeneID:820047
            KEGG:ath:AT3G01840 GeneFarm:2726 TAIR:At3g01840 eggNOG:NOG303928
            HOGENOM:HOG000090363 InParanoid:Q9SGI7 OMA:FIASCYC PhylomeDB:Q9SGI7
            ProtClustDB:CLSN2685019 Genevestigator:Q9SGI7 Uniprot:Q9SGI7
        Length = 654

 Score = 127 (49.8 bits), Expect = 7.7e-05, P = 7.7e-05
 Identities = 45/196 (22%), Positives = 85/196 (43%)

Query:    13 SNAAMVLVTPKSTIEPCSNSDSCSAL--------LGYTLYTDLKVSEVGSLFNVDPVSIL 64
             S   ++L    S++ P S S SC  +         GY  +++L+     ++    P    
Sbjct:    12 SLVVILLFISLSSLSPTSTSHSCDPVEEEEEASSFGYVCHSNLQKCHTFAILRAKPPFYS 71

Query:    65 TANAIDISYSDVENHILPSQLFVRIPVTCACVDGIRKSVSTHYKTRPSDTLTSIANQVYA 124
              ++       D ++  +P    + IP+ C C   I ++ S        DT  S++ Q   
Sbjct:    72 LSDLSRHLGLDADDEYVPKGQLLLIPIECRCNGSIYEA-SLIKNCVKGDTFRSVS-QSLQ 129

Query:   125 GLVSADQLREANDIQDPDVLDVGVNLLVPLPCTC-FNGTDNSLPAVYLSYVVKDVDTLAG 183
             GL +   +RE N     D L   + L + + C+C   G  N+  +  ++Y V   D+++ 
Sbjct:   130 GLTTCLSIREKNPHISEDKLGDNIKLRLAIRCSCPQEGVSNA--SFLVTYPVGVRDSVSS 187

Query:   184 IAARYRTTLTDLMNAN 199
             +A R+ TT   +++AN
Sbjct:   188 LAVRFNTTEDAIVSAN 203


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.318   0.132   0.395    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      415       381   0.00090  117 3  11 22  0.39    34
                                                     34  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  7
  No. of states in DFA:  591 (63 KB)
  Total size of DFA:  218 KB (2120 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  33.95u 0.08s 34.03t   Elapsed:  00:00:01
  Total cpu time:  33.95u 0.08s 34.03t   Elapsed:  00:00:01
  Start:  Thu May  9 17:19:58 2013   End:  Thu May  9 17:19:59 2013

Back to top