BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 014940
(415 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q93ZH0|LYM1_ARATH LysM domain-containing GPI-anchored protein 1 OS=Arabidopsis
thaliana GN=LYM1 PE=1 SV=1
Length = 416
Score = 563 bits (1450), Expect = e-159, Method: Compositional matrix adjust.
Identities = 275/414 (66%), Positives = 338/414 (81%), Gaps = 12/414 (2%)
Query: 2 PKTLLYLLLLFSNAAMVLVTPKSTIEPCSNSDSCSALLGYTLYTDLKVSEVGSLFNVDPV 61
P L+++ L+ +++ T KSTIEPCS++D+C+ALLGYTLYTDLKVSEV SLF VDP+
Sbjct: 7 PIFLIFVSLILASSLTFTATAKSTIEPCSSNDTCNALLGYTLYTDLKVSEVASLFQVDPI 66
Query: 62 SILTANAIDISYSDVENHILPSQLFVRIPVTCACVDGIRKSVSTHYKTRPSDTLTSIANQ 121
SIL ANAIDISY DVENHILPS+LF++IP+TC+CVDGIRKSVSTHYKTRPSD L SIA+
Sbjct: 67 SILLANAIDISYPDVENHILPSKLFLKIPITCSCVDGIRKSVSTHYKTRPSDNLGSIADS 126
Query: 122 VYAGLVSADQLREANDIQDPDVLDVGVNLLVPLPCTCFNGTDNSLPAVYLSYVVKDVDTL 181
VY GLVSA+Q++EAN + DP +LDVG +L++PLPC CFNGTDNSLPAVYLSYVVK++DTL
Sbjct: 127 VYGGLVSAEQIQEANSVNDPSLLDVGTSLVIPLPCACFNGTDNSLPAVYLSYVVKEIDTL 186
Query: 182 AGIAARYRTTLTDLMNANAMGSTAVKAGDILAVPLPACATNFPRYALDHGLIVPNGSYAI 241
GIA RY TT+TDLMN NAMG+ V +GDILAVPL ACA+ FPRYA D GLIVPNGSYA+
Sbjct: 187 VGIARRYSTTITDLMNVNAMGAPDVSSGDILAVPLSACASKFPRYASDFGLIVPNGSYAL 246
Query: 242 TASHCVQCSCGPGNLNLYCMPASLAVSCSSMQCKNSNLMLGNVTTQRSSAGCNVTSCSYG 301
A HCVQCSC G+ NLYC PASLAVSCSSMQC+NSNLMLGN+T Q++SAGCNVT+C Y
Sbjct: 247 AAGHCVQCSCALGSRNLYCEPASLAVSCSSMQCRNSNLMLGNITVQQTSAGCNVTTCDYN 306
Query: 302 GFVNGTIVTMLSTSLQPRCPGPQQFPPLIAPPSSVTRDSTFAPSPAPQSDGAGPAGATTP 361
G NGTI+TML+ SLQPRCPGPQQF PL+APP +V RD +AP+P+P DG G + A++P
Sbjct: 307 GIANGTILTMLTRSLQPRCPGPQQFAPLLAPPDTVPRDVMYAPAPSPDFDGPG-SIASSP 365
Query: 362 KSSVVPSSGSIPGLPPASGPSGSVSSACSLTNSLSTFPPAFMLYLFVKFIVSIS 415
+SS++P G +PG PA+GP+GS+S+A + + S Y F+ F++SI+
Sbjct: 366 RSSMLPGGGILPG-NPANGPAGSISTASASSVS----------YFFITFLISIA 408
>sp|Q6NPN4|LYM3_ARATH LysM domain-containing GPI-anchored protein 2 OS=Arabidopsis
thaliana GN=LYM3 PE=1 SV=1
Length = 423
Score = 487 bits (1253), Expect = e-137, Method: Compositional matrix adjust.
Identities = 244/398 (61%), Positives = 313/398 (78%), Gaps = 12/398 (3%)
Query: 2 PKTLLYLLLLFSNAAMVLVTPKSTIEPCSNSDSCSALLGYTLYTDLKVSEVGSLFNVDPV 61
P+ L L L+ +++ + T KSTIEPCS+ D+C++LLGYTLYTDLKV+EV SLF VDPV
Sbjct: 4 PEKPLLLFLILASSLASMATAKSTIEPCSSKDTCNSLLGYTLYTDLKVTEVASLFQVDPV 63
Query: 62 SILTANAIDISYSDVENHILPSQLFVRIPVTCACVDGIRKSVSTHYKTRPSDTLTSIANQ 121
S+L +N+IDISY DVENH+LP++LF++IP+TC+CVDGIRKS+STHYKTR SDTL SIA+
Sbjct: 64 SMLLSNSIDISYPDVENHVLPAKLFLKIPITCSCVDGIRKSLSTHYKTRTSDTLGSIADS 123
Query: 122 VYAGLVSADQLREANDIQDPDVLDVGVNLLVPLPCTCFNGTDNSLPAVYLSYVVKDVDTL 181
VY GLVS +Q++ AN D VLDVG L++PLPC CFNGTD SLPA+YLSYVV+ +DT+
Sbjct: 124 VYGGLVSPEQIQVANSETDLSVLDVGTKLVIPLPCACFNGTDESLPALYLSYVVRGIDTM 183
Query: 182 AGIAARYRTTLTDLMNANAMGSTAVKAGDILAVPLPACATNFPRYALDHGLIVPNGSYAI 241
AGIA R+ T++TDL N NAMG+ + GDILAVPL AC++NFP+YA D+GLI+PNGSYA+
Sbjct: 184 AGIAKRFSTSVTDLTNVNAMGAPDINPGDILAVPLLACSSNFPKYATDYGLIIPNGSYAL 243
Query: 242 TASHCVQCSCGPGNLNLYCMPASLAVSCSSMQCKNSNLMLGNVTTQRSSAGCNVTSCSYG 301
TA HCVQCSC G+ ++YC PAS++VSCSSM+C+NSN MLGN+T+Q+SS+GC +T+CSY
Sbjct: 244 TAGHCVQCSCVLGSRSMYCEPASISVSCSSMRCRNSNFMLGNITSQQSSSGCKLTTCSYN 303
Query: 302 GFVNGTIVTMLSTSLQPRCPGPQQFPPLIAPPSSVTRDSTF----APSPAPQSDGAGPAG 357
GF +GTI+T LS SLQPRCPGPQQ PLIAPP +V ++ + +PSP+P+ D G
Sbjct: 304 GFASGTILTTLSMSLQPRCPGPQQLAPLIAPPDNVPKELMYLPSPSPSPSPEFDDIAGGG 363
Query: 358 -------ATTPKSSVVPSSGSIPGLPPASGPSGSVSSA 388
A +P + V SS SIPG PA+GP GS+S A
Sbjct: 364 SSIAAVPAASPGGATVSSSNSIPG-NPANGPGGSISIA 400
>sp|O23006|LYM2_ARATH LysM domain-containing GPI-anchored protein 2 OS=Arabidopsis
thaliana GN=LYM2 PE=1 SV=1
Length = 350
Score = 132 bits (333), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 103/313 (32%), Positives = 162/313 (51%), Gaps = 33/313 (10%)
Query: 29 CSNSDS-CSALLGYTLYTDLKVSEVGSLFNVDPV-SILTANAIDISYSDVENHILPSQLF 86
CS S S C +L+GY+ + + +LF V + SIL AN + ++ S + + P+Q+
Sbjct: 31 CSGSTSTCQSLVGYSSKNATTLRNIQTLFAVKNLRSILGANNLPLNTSR-DQRVNPNQV- 88
Query: 87 VRIPVTCACVDGIRKS-VSTHYKTRPSDTLTSIANQVYAGLVSADQLREANDIQDPDVLD 145
VR+P+ C+C +G S Y + D L+ +A +++ GLV+ +++ E N I DP+ ++
Sbjct: 89 VRVPIHCSCSNGTGVSNRDIEYTIKKDDILSFVATEIFGGLVTYEKISEVNKIPDPNKIE 148
Query: 146 VGVNLLVPLPCTC--FNGTDNSLPAVYLSYVVKDVDTLAGIAARYRTTLTDLMNANA-MG 202
+G +PLPC+C NG D V+ ++VVK +L IAA++ T T L N +G
Sbjct: 149 IGQKFWIPLPCSCDKLNGED----VVHYAHVVKLGSSLGEIAAQFGTDNTTLAQLNGIIG 204
Query: 203 STAVKAGDILAVPLPACATNFPRYALDHGLIVPNGSYAITASHCVQCSCGP-GNLNLYCM 261
+ + A L VPL AC+++ + +LD L++ N SY TA++CV+C+C N L C
Sbjct: 205 DSQLLADKPLDVPLKACSSSVRKDSLDAPLLLSNNSYVFTANNCVKCTCDALKNWTLSCQ 264
Query: 262 PASLAVSCSSMQCKNSNLMLGNVTTQRSSAGCNVT-----SCSYGGFVNGTIVTMLSTSL 316
SS + K SN +Q A N + C Y G+ N TI T S
Sbjct: 265 --------SSSEIKPSNWQTCPPFSQCDGALLNASCRQPRDCVYAGYSNQTIFTTAS--- 313
Query: 317 QPRCP---GPQQF 326
P CP GP +
Sbjct: 314 -PACPDSAGPDNY 325
>sp|Q8H8C7|CEBIP_ORYSJ Chitin elicitor-binding protein OS=Oryza sativa subsp. japonica
GN=CEBIP PE=1 SV=1
Length = 356
Score = 120 bits (300), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 81/250 (32%), Positives = 127/250 (50%), Gaps = 17/250 (6%)
Query: 87 VRIPVTCACVDGIRKSVST-HYKTRPSDTLTSIANQVYAGLVSADQLREANDIQDPDVLD 145
V+IP C C + +S Y +P D L +IA V+ V+ ++ AN+I DP+ ++
Sbjct: 92 VKIPFRCRCNGDVGQSDRLPIYVVQPQDGLDAIARNVFNAFVTYQEIAAANNIPDPNKIN 151
Query: 146 VGVNLLVPLPCTCFNGTDNSLPAVYLSYVVKDVDTLAGIAARYRTTLTDLMNANAMGS-T 204
V L +PLPC+C + ++L+Y V + + IAA+Y T + L+ N + T
Sbjct: 152 VSQTLWIPLPCSC--DKEEGSNVMHLAYSVGKGENTSAIAAKYGVTESTLLTRNKIDDPT 209
Query: 205 AVKAGDILAVPLPACATNFPRYALDHGL-IVPNGSYAITASHCVQCSCGPGNLNLYCMPA 263
++ G IL VPLP C ++ + DH L ++P+G+Y TA +C++CSC L C A
Sbjct: 210 KLQMGQILDVPLPVCRSSISDTSADHNLMLLPDGTYGFTAGNCIRCSCSSTTYQLNCT-A 268
Query: 264 SLAVSCSSMQCKNSNLMLGNVTTQRSSAGCNVTSCSYGGFVNGT---IVTMLSTSLQPRC 320
C S+ N L LG + + GC T+C+Y G+ N + I T L+T+ C
Sbjct: 269 VQNKGCPSVPLCNGTLKLG----ETNGTGCGSTTCAYSGYSNSSSLIIQTSLATNQTTAC 324
Query: 321 P----GPQQF 326
G QF
Sbjct: 325 QRGGSGRSQF 334
>sp|O64825|LYK4_ARATH LysM domain receptor-like kinase 4 OS=Arabidopsis thaliana GN=LYK4
PE=1 SV=1
Length = 612
Score = 56.6 bits (135), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 88/191 (46%), Gaps = 26/191 (13%)
Query: 29 CSNSDSCSALLGYT---------LYTDLK-------VSEVGSLFNVDPVSILTANAIDIS 72
CS SD+ +++ GY+ Y + V+ + SLF+VDP + + N S
Sbjct: 34 CSVSDNTTSVFGYSCNGLNKTCQAYVIFRSTPSFSTVTSISSLFSVDPSLVSSLNDASPS 93
Query: 73 YSDVENHILPSQLFVRIPVTCACVDGIRKSVSTHYKTRPSDTLTSIANQVYAGLVSADQL 132
S PS V IP+TC+C +S T Y +P+D+ +IAN GL + L
Sbjct: 94 TS------FPSGQQVIIPLTCSCTGDDSQSNIT-YTIQPNDSYFAIANDTLQGLSTCQAL 146
Query: 133 REANDIQDPDVLDVGVNLLVPLPCTCFNGTD-NSLPAVYL-SYVVKDVDTLAGIAARYRT 190
+ N++ + G+ ++VP+ C C N YL SY V DT+A I+ R+
Sbjct: 147 AKQNNVSSQSLFP-GMRIVVPIRCACPTAKQINEDGVKYLMSYTVVFEDTIAIISDRFGV 205
Query: 191 TLTDLMNANAM 201
+ + AN M
Sbjct: 206 ETSKTLKANEM 216
>sp|Q1DUF9|INO80_COCIM Putative DNA helicase INO80 OS=Coccidioides immitis (strain RS)
GN=INO80 PE=3 SV=1
Length = 1662
Score = 46.2 bits (108), Expect = 5e-04, Method: Composition-based stats.
Identities = 27/69 (39%), Positives = 35/69 (50%), Gaps = 9/69 (13%)
Query: 323 PQQFPPLIAPPSSVTRDSTFAPSPAPQSDGAGPAGATTPKSSVVPSSGSIPGLPPASGPS 382
P + PP APPSS++R FA P+P + P T VV + GS PP G S
Sbjct: 40 PPRTPPSFAPPSSLSRSPHFARPPSPMNTTLPPLNGT-----VVNADGS----PPYHGHS 90
Query: 383 GSVSSACSL 391
GS +S +L
Sbjct: 91 GSATSGYTL 99
>sp|O22808|LYK5_ARATH Protein LYK5 OS=Arabidopsis thaliana GN=LYK5 PE=1 SV=1
Length = 664
Score = 41.6 bits (96), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 50/108 (46%), Gaps = 2/108 (1%)
Query: 110 RPSDTLTSIANQVYAGLVSADQLREANDIQDPDVLDVGVNLLVPLPCTCFNGTDNSLPAV 169
R +T S+AN Y L + + N + L G+NLLVPL C C +
Sbjct: 134 RGDETYFSVANDTYQALSTCQAMMSQNRYGERQ-LTPGLNLLVPLRCACPTAKQTTAGFK 192
Query: 170 Y-LSYVVKDVDTLAGIAARYRTTLTDLMNANAMGSTAVKAGDILAVPL 216
Y L+Y+V D+++GIA + +T + N + S + + VPL
Sbjct: 193 YLLTYLVAMGDSISGIAEMFNSTSAAITEGNELTSDNIFFFTPVLVPL 240
>sp|P0C2T5|ACMA_LACLC Probable N-acetylmuramidase OS=Lactococcus lactis subsp. cremoris
GN=acmA PE=3 SV=1
Length = 437
Score = 41.6 bits (96), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 61/130 (46%), Gaps = 18/130 (13%)
Query: 107 YKTRPSDTLTSIANQVYAGLVSADQLREANDIQDPDVLDVGVNLLVPLPCTCFN--GTDN 164
Y + DTL I+ Q Y +S Q++ AN+++ ++ +G LL+ + N G++N
Sbjct: 245 YTVKSGDTLWGIS-QRYG--ISVAQIQSANNLKST-IIYIGQKLLLTGSASSTNSGGSNN 300
Query: 165 SL------------PAVYLSYVVKDVDTLAGIAARYRTTLTDLMNANAMGSTAVKAGDIL 212
S PA S VK DTL ++ +Y+T++ L + N + S + G L
Sbjct: 301 SASTTPTTSVTPAKPASQTSVKVKSGDTLWALSVKYKTSIAQLKSWNHLSSDTIYIGQNL 360
Query: 213 AVPLPACATN 222
V A +N
Sbjct: 361 IVSQSAATSN 370
>sp|Q01837|P60_LISIV Probable endopeptidase p60 OS=Listeria ivanovii GN=iap PE=3 SV=1
Length = 524
Score = 40.4 bits (93), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 34/54 (62%)
Query: 172 SYVVKDVDTLAGIAARYRTTLTDLMNANAMGSTAVKAGDILAVPLPACATNFPR 225
+Y VK DT+ ++++Y T++ ++M+ N + S+++ G +LAV A T P+
Sbjct: 197 TYTVKSGDTIWALSSKYGTSVQNIMSWNNLSSSSIYVGQVLAVKQEAAKTASPK 250
Score = 33.1 bits (74), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Query: 172 SYVVKDVDTLAGIAARYRTTLTDLMNANAMGSTAVKAGDILAVP--LPACATN 222
SY VK DTL+ IA + TT++ + N + S ++ G +L V +P TN
Sbjct: 313 SYTVKSGDTLSKIATTFGTTVSKIKALNGLNSDNLQVGQVLKVKGTVPTANTN 365
>sp|P37531|YAAH_BACSU Spore germination protein YaaH OS=Bacillus subtilis (strain 168)
GN=yaaH PE=2 SV=1
Length = 427
Score = 40.0 bits (92), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 53/107 (49%), Gaps = 18/107 (16%)
Query: 110 RPSDTLTSIANQVYAGLVSADQLREANDIQDPDVLDVGVNLLVPLPCTCFNGTDNSLPAV 169
+ DTL++IA+Q + + + E N+I +PD L VG +++P+ ++
Sbjct: 3 KQGDTLSAIASQY---RTTTNDITETNEIPNPDSLVVGQTIVIPIAGQFYD--------- 50
Query: 170 YLSYVVKDVDTLAGIAARYRTTLTDLMNANAMG-STAVKAGDILAVP 215
VK DTL IA ++ TT +L N + +T ++ G L +P
Sbjct: 51 -----VKRGDTLTSIARQFNTTAAELARVNRIQLNTVLQIGFRLYIP 92
>sp|P39800|XLYA_BACSU N-acetylmuramoyl-L-alanine amidase XlyA OS=Bacillus subtilis
(strain 168) GN=xlyA PE=1 SV=1
Length = 297
Score = 40.0 bits (92), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 34/61 (55%), Gaps = 3/61 (4%)
Query: 98 GIRKSVSTHYKTRPSDTLTSIANQVYAGLVSADQLREANDIQDPDVLDVGVNLLVPLPCT 157
GI S Y + DTLTSIA A V+ QL+E N+I+DP+++ VG L+V P
Sbjct: 152 GIGGGGSQTYVVKQGDTLTSIAR---AFGVTVAQLQEWNNIEDPNLIRVGQVLIVSAPSA 208
Query: 158 C 158
Sbjct: 209 A 209
Score = 32.7 bits (73), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 36/89 (40%), Gaps = 2/89 (2%)
Query: 172 SYVVKDVDTLAGIAARYRTTLTDLMNANAMGS-TAVKAGDILAVPLPACATNFPRYALDH 230
+YVVK DTL IA + T+ L N + ++ G +L V P+ A Y L
Sbjct: 160 TYVVKQGDTLTSIARAFGVTVAQLQEWNNIEDPNLIRVGQVLIVSAPSAAEKPELYPLPD 219
Query: 231 GLIVPNGSYAITASHCVQCSCGPGNLNLY 259
G+I Y + H Q L Y
Sbjct: 220 GIIQLTTPYT-SGEHVFQVQRALAALYFY 247
>sp|A2RHZ5|ACMA_LACLM Probable N-acetylmuramidase OS=Lactococcus lactis subsp. cremoris
(strain MG1363) GN=acmA PE=3 SV=1
Length = 437
Score = 38.9 bits (89), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 61/130 (46%), Gaps = 18/130 (13%)
Query: 107 YKTRPSDTLTSIANQVYAGLVSADQLREANDIQDPDVLDVGVNLLVPLPCTCFN--GTDN 164
Y + DTL I+ Q Y +S Q++ AN+++ ++ +G L++ + N G++N
Sbjct: 245 YTVKSGDTLWGIS-QRYG--ISVAQIQSANNLKST-IIYIGQKLVLTGSASSTNSGGSNN 300
Query: 165 SL------------PAVYLSYVVKDVDTLAGIAARYRTTLTDLMNANAMGSTAVKAGDIL 212
S P + VK DTL ++ +Y+T++ L + N + S + G L
Sbjct: 301 SASTTPTTSVTPAKPTSQTTVKVKSGDTLWALSVKYKTSIAQLKSWNHLSSDTIYIGQNL 360
Query: 213 AVPLPACATN 222
V A A+N
Sbjct: 361 IVSQSAAASN 370
>sp|Q49UX4|SLE1_STAS1 N-acetylmuramoyl-L-alanine amidase sle1 OS=Staphylococcus
saprophyticus subsp. saprophyticus (strain ATCC 15305 /
DSM 20229) GN=sle1 PE=3 SV=1
Length = 327
Score = 38.1 bits (87), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 60/121 (49%), Gaps = 7/121 (5%)
Query: 94 ACVDGIRKSVSTHYKTRPSDTLTSIANQVYAGLVSADQLREANDIQDPDVLDVGVNLLVP 153
A V +T YK + D+L SIAN+ +S +L+ N++ +V+ +L V
Sbjct: 16 AAVTWTNADAATTYKVKSGDSLWSIANKY---NMSVAKLKSLNNLT-SNVIFPNQSLKVS 71
Query: 154 LPCTCFNGTDNSLPAVYLSYVVKDVDTLAGIAARYRTTLTDLMNANAMGSTAVKAGDILA 213
+ + +S + +Y VK DTL+GIAA+Y TT +M+ N + + + G L
Sbjct: 72 GSTSS---STSSNTSTGSTYTVKSGDTLSGIAAKYGTTYQKIMSLNGLSNFNIYPGQKLK 128
Query: 214 V 214
V
Sbjct: 129 V 129
>sp|Q9SGI7|LYK2_ARATH Protein LYK2 OS=Arabidopsis thaliana GN=LYK2 PE=2 SV=1
Length = 654
Score = 38.1 bits (87), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 60/126 (47%), Gaps = 5/126 (3%)
Query: 75 DVENHILPSQLFVRIPVTCACVDGIRKSVSTHYKTRPSDTLTSIANQVYAGLVSADQLRE 134
D ++ +P + IP+ C C I ++ S DT S++ Q GL + +RE
Sbjct: 82 DADDEYVPKGQLLLIPIECRCNGSIYEA-SLIKNCVKGDTFRSVS-QSLQGLTTCLSIRE 139
Query: 135 ANDIQDPDVLDVGVNLLVPLPCTC-FNGTDNSLPAVYLSYVVKDVDTLAGIAARYRTTLT 193
N D L + L + + C+C G N+ + ++Y V D+++ +A R+ TT
Sbjct: 140 KNPHISEDKLGDNIKLRLAIRCSCPQEGVSNA--SFLVTYPVGVRDSVSSLAVRFNTTED 197
Query: 194 DLMNAN 199
+++AN
Sbjct: 198 AIVSAN 203
>sp|A8R7E6|CERK1_ARATH Chitin elicitor receptor kinase 1 OS=Arabidopsis thaliana GN=CERK1
PE=1 SV=1
Length = 617
Score = 37.7 bits (86), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 57/152 (37%), Gaps = 37/152 (24%)
Query: 107 YKTRPSDTLTSIANQVYAGLVSADQ------LREANDIQDPDVLDVGVNLLVPLPCTCFN 160
Y TL+ I + + + DQ LR ++I+D D + +G +LVP PC C
Sbjct: 36 YYLENGTTLSVINQNLNSSIAPYDQINFDPILRYNSNIKDKDRIQMGSRVLVPFPCECQP 95
Query: 161 GTDNSLPAVYLSYVVKDVDTLAGIAARYRTTLTDLMNANAMGSTAVKAGDILAVPLPACA 220
G SY V+ DT R +++ N M S + P P A
Sbjct: 96 G---DFLGHNFSYSVRQEDTYE------RVAISNYANLTTMESLQARN------PFP--A 138
Query: 221 TNFPRYALDHGLIVPNGSYAITASHCVQCSCG 252
TN P A T + V CSCG
Sbjct: 139 TNIPLSA--------------TLNVLVNCSCG 156
Score = 33.9 bits (76), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 58/130 (44%), Gaps = 10/130 (7%)
Query: 57 NVDPVSILTANAIDISYSDVENHILPSQLFVRIPVTCACVDGIRKSVSTHYKTRPSDTLT 116
N DP+ +N D + + +L +P C C G + Y R DT
Sbjct: 62 NFDPILRYNSNIKDKDRIQMGSRVL-------VPFPCECQPGDFLGHNFSYSVRQEDTYE 114
Query: 117 SIANQVYAGLVSADQLREANDIQDPDV-LDVGVNLLVPLPCTCFNGTDNSLPAVYLSYVV 175
+A YA L + + L+ N ++ L +N+LV C+C + + + ++++Y +
Sbjct: 115 RVAISNYANLTTMESLQARNPFPATNIPLSATLNVLV--NCSCGDESVSKDFGLFVTYPL 172
Query: 176 KDVDTLAGIA 185
+ D+L+ IA
Sbjct: 173 RPEDSLSSIA 182
>sp|Q8N573|OXR1_HUMAN Oxidation resistance protein 1 OS=Homo sapiens GN=OXR1 PE=1 SV=2
Length = 874
Score = 36.6 bits (83), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 28/52 (53%)
Query: 167 PAVYLSYVVKDVDTLAGIAARYRTTLTDLMNANAMGSTAVKAGDILAVPLPA 218
P + Y V+ D+L IA ++ TT +L+ N + S AV G +L VP P
Sbjct: 95 PKGTIEYTVESRDSLNSIALKFDTTPNELVQLNKLFSRAVVTGQVLYVPDPE 146
>sp|P54421|LYTE_BACSU Probable peptidoglycan endopeptidase LytE OS=Bacillus subtilis
(strain 168) GN=lytE PE=1 SV=1
Length = 334
Score = 36.6 bits (83), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 57/110 (51%), Gaps = 5/110 (4%)
Query: 107 YKTRPSDTLTSIANQVYAGLVSADQLREANDIQDPDVLDVGVNL-LVPLPCTCFNGTDNS 165
YK + D+L I+ + Y ++ ++L++ N ++ D+L VG L L + + +
Sbjct: 88 YKVKSGDSLWKISKK-YG--MTINELKKLNGLK-SDLLRVGQVLKLKGSTSSSSSSSSKV 143
Query: 166 LPAVYLSYVVKDVDTLAGIAARYRTTLTDLMNANAMGSTAVKAGDILAVP 215
+ +Y VK D+L+ IA++Y TT++ L + N + S + +L V
Sbjct: 144 SSSSTSTYKVKSGDSLSKIASKYGTTVSKLKSLNGLKSDVIYVNQVLKVK 193
>sp|Q4V8B0|OXR1_RAT Oxidation resistance protein 1 OS=Rattus norvegicus GN=Oxr1 PE=1
SV=3
Length = 839
Score = 36.2 bits (82), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 28/52 (53%)
Query: 167 PAVYLSYVVKDVDTLAGIAARYRTTLTDLMNANAMGSTAVKAGDILAVPLPA 218
P + Y V+ D+L IA ++ TT +L+ N + S AV G +L VP P
Sbjct: 87 PKGTIEYTVESRDSLNSIALKFDTTPNELVQLNKLFSRAVVTGQVLYVPDPE 138
>sp|Q4KMM3|OXR1_MOUSE Oxidation resistance protein 1 OS=Mus musculus GN=Oxr1 PE=1 SV=3
Length = 866
Score = 36.2 bits (82), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 28/52 (53%)
Query: 167 PAVYLSYVVKDVDTLAGIAARYRTTLTDLMNANAMGSTAVKAGDILAVPLPA 218
P + Y V+ D+L IA ++ TT +L+ N + S AV G +L VP P
Sbjct: 94 PKGTIEYTVESRDSLNSIALKFDTTPNELVQLNKLFSRAVVTGQVLYVPDPE 145
>sp|P37710|ALYS_ENTFA Autolysin OS=Enterococcus faecalis (strain ATCC 700802 / V583)
GN=EF_0799 PE=3 SV=2
Length = 737
Score = 36.2 bits (82), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 54/118 (45%), Gaps = 10/118 (8%)
Query: 104 STHYKTRPSDTLTSIANQVYAGLVSADQLREANDIQDPDVLDVGVNLLVPLPCTCFNGTD 163
+T+Y + DTL IA Q Y VS LR N I D++ VG L+V + G
Sbjct: 428 NTYYTVKSGDTLNKIAAQ-YG--VSVANLRSWNGI-SGDLIFVGQKLIVKKGASGNTGGS 483
Query: 164 NSLPAVYLS------YVVKDVDTLAGIAARYRTTLTDLMNANAMGSTAVKAGDILAVP 215
N+ + Y +K DTL IAA+Y ++ +L + N + + AG + V
Sbjct: 484 NNGGSNNNQSGTNTYYTIKSGDTLNKIAAQYGVSVANLRSWNGISGDLIFAGQKIIVK 541
Score = 35.8 bits (81), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 53/121 (43%), Gaps = 10/121 (8%)
Query: 104 STHYKTRPSDTLTSIANQVYAGLVSADQLREANDIQDPDVLDVGVNLLVPLPCTCFNGTD 163
+T+Y + DTL IA Q Y VS LR N I D++ VG L+V + G
Sbjct: 360 NTYYTVKSGDTLNKIAAQ-YG--VSVANLRSWNGI-SGDLIFVGQKLIVKKGASGNTGGS 415
Query: 164 NSLPAVYLS------YVVKDVDTLAGIAARYRTTLTDLMNANAMGSTAVKAGDILAVPLP 217
S + Y VK DTL IAA+Y ++ +L + N + + G L V
Sbjct: 416 GSGGSNNNQSGTNTYYTVKSGDTLNKIAAQYGVSVANLRSWNGISGDLIFVGQKLIVKKG 475
Query: 218 A 218
A
Sbjct: 476 A 476
Score = 35.0 bits (79), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 53/121 (43%), Gaps = 8/121 (6%)
Query: 104 STHYKTRPSDTLTSIANQVYAGLVSADQLREANDIQDPDVLDVGVNLLVPLPC----TCF 159
+T+Y + DTL I+ Q VS L+ N+I + G ++V T
Sbjct: 564 NTYYTIKSGDTLNKISAQF---GVSVANLQAWNNISGSLIF-AGQKIIVKKGANSGSTNT 619
Query: 160 NGTDNSLPAVYLSYVVKDVDTLAGIAARYRTTLTDLMNANAMGSTAVKAGDILAVPLPAC 219
N N+ SY +K DTL I+A++ ++ +L + N + + AG + V A
Sbjct: 620 NKPTNNGGGATTSYTIKSGDTLNKISAQFGVSVANLRSWNGIKGDLIFAGQTIIVKKGAS 679
Query: 220 A 220
A
Sbjct: 680 A 680
>sp|A5PKL1|OXR1_BOVIN Oxidation resistance protein 1 OS=Bos taurus GN=OXR1 PE=2 SV=2
Length = 872
Score = 36.2 bits (82), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 28/52 (53%)
Query: 167 PAVYLSYVVKDVDTLAGIAARYRTTLTDLMNANAMGSTAVKAGDILAVPLPA 218
P + Y V+ D+L IA ++ TT +L+ N + S AV G +L VP P
Sbjct: 94 PKGTVKYTVESRDSLNSIALKFDTTPNELVQLNKLFSRAVVTGQVLYVPDPE 145
>sp|Q9P403|CIH1_COLLN Intracellular hyphae protein 1 OS=Colletotrichum lindemuthianum
GN=CIH1 PE=1 SV=1
Length = 230
Score = 35.4 bits (80), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 62/136 (45%), Gaps = 22/136 (16%)
Query: 95 CVDGIRKSVSTHYKTRPSDTLTSIANQVYAGLVSADQLREANDIQDPDVLDVGVNLLVPL 154
CVDG + TH K + ++LT+IA + G+ + +L N++ DP+ +D+ +L +P
Sbjct: 102 CVDG---KIKTH-KVKSGESLTTIAEKYDTGICNIAKL---NNLADPNFVDLNQDLQIPT 154
Query: 155 P--------CTCFNGT-----DNSLPAVYLSYVVKDVDTLAGIAARYRTTLTDLMNAN-A 200
C +GT D + Y V DTL IA + TL L +AN
Sbjct: 155 DACEKDNTSCIKPDGTATCVKDGKKDGKDI-YSVVSGDTLTSIAQALQITLQSLKDANPG 213
Query: 201 MGSTAVKAGDILAVPL 216
+ + G L VP+
Sbjct: 214 VVPEHLNVGQKLNVPV 229
>sp|Q4L3C1|SLE1_STAHJ N-acetylmuramoyl-L-alanine amidase sle1 OS=Staphylococcus
haemolyticus (strain JCSC1435) GN=sle1 PE=3 SV=1
Length = 329
Score = 34.3 bits (77), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 25/43 (58%)
Query: 172 SYVVKDVDTLAGIAARYRTTLTDLMNANAMGSTAVKAGDILAV 214
+Y V+ D+L+ IA+RY TT +MN N + S + G L V
Sbjct: 89 TYTVRAGDSLSSIASRYGTTYRHIMNLNGLNSFLIFPGQQLKV 131
>sp|Q9H3S7|PTN23_HUMAN Tyrosine-protein phosphatase non-receptor type 23 OS=Homo sapiens
GN=PTPN23 PE=1 SV=1
Length = 1636
Score = 34.3 bits (77), Expect = 1.9, Method: Composition-based stats.
Identities = 24/78 (30%), Positives = 30/78 (38%), Gaps = 11/78 (14%)
Query: 316 LQPRCPGPQQFP----PLIAPPSSVTRDSTFAPSPAPQSD-------GAGPAGATTPKSS 364
+QPR PGP P P + P + T + P +PQ G GPA S
Sbjct: 803 IQPRAPGPHAMPVAPGPALYPAPAYTPELGLVPRSSPQHGVVSSPYVGVGPAPPVAGLPS 862
Query: 365 VVPSSGSIPGLPPASGPS 382
P S P L A P+
Sbjct: 863 APPPQFSGPELAMAVRPA 880
>sp|Q10614|Y1288_MYCTU Uncharacterized protein Rv1288/MT1326 OS=Mycobacterium tuberculosis
GN=Rv1288 PE=4 SV=1
Length = 456
Score = 33.5 bits (75), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 39/84 (46%), Gaps = 15/84 (17%)
Query: 105 THYKTRPSDTLTSIANQVYAGLVSADQLREANDIQDPDVLDVGVNLLVPLPCTCFNGTDN 164
T Y DTL+++A + Y + A+ I DPDV++VG L++P
Sbjct: 54 TRYTVVAGDTLSALALRFYGDAELNWLIAAASGIADPDVVNVGQRLIMP----------- 102
Query: 165 SLPAVYLSYVVKDVDTLAGIAARY 188
+ Y V DTL+ +AAR+
Sbjct: 103 ----DFTRYTVVAGDTLSALAARF 122
>sp|Q01838|P60_LISSE Probable endopeptidase p60 OS=Listeria seeligeri GN=iap PE=3 SV=1
Length = 523
Score = 33.5 bits (75), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 35/67 (52%), Gaps = 3/67 (4%)
Query: 162 TDNSLPAV---YLSYVVKDVDTLAGIAARYRTTLTDLMNANAMGSTAVKAGDILAVPLPA 218
T + PAV ++ VK DT+ ++ +Y ++ DLM+ N + S+++ G +AV A
Sbjct: 186 TKTTAPAVDTNATTHTVKSGDTIWALSVKYGASVQDLMSWNNLSSSSIYVGQNIAVKQSA 245
Query: 219 CATNFPR 225
P+
Sbjct: 246 AKNTAPK 252
Score = 33.5 bits (75), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 26/44 (59%)
Query: 172 SYVVKDVDTLAGIAARYRTTLTDLMNANAMGSTAVKAGDILAVP 215
SY VK DTL IA+ + TT++ + N + S ++ GD+L V
Sbjct: 319 SYTVKSGDTLGKIASTFGTTVSKIKALNGLTSDNLQVGDVLKVK 362
>sp|Q4ZG55|GREB1_HUMAN Protein GREB1 OS=Homo sapiens GN=GREB1 PE=2 SV=1
Length = 1949
Score = 32.7 bits (73), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 46/104 (44%), Gaps = 12/104 (11%)
Query: 319 RCPGPQQFPPL-IAPPSSVTRDSTFAPSPAPQSDGAGPAGATTPKSSVVPSSGSIPG--- 374
R PG +Q P PPS+++R S P P PQ D + G + + SV S +
Sbjct: 1171 RAPGEKQRPRASQGPPSAISRHS---PGPTPQPDCSLRTGQRSVQVSVTSSCSQLSSSSG 1227
Query: 375 -----LPPASGPSGSVSSACSLTNSLSTFPPAFMLYLFVKFIVS 413
+ PA+G +S CSLT + P F+ L +VS
Sbjct: 1228 SSSSSVAPAAGTWVLQASQCSLTKACRQPPIVFLPKLVYDMVVS 1271
>sp|Q9CIT4|ACMA_LACLA Probable N-acetylmuramidase OS=Lactococcus lactis subsp. lactis
(strain IL1403) GN=acmA PE=3 SV=1
Length = 439
Score = 32.3 bits (72), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 26/48 (54%)
Query: 167 PAVYLSYVVKDVDTLAGIAARYRTTLTDLMNANAMGSTAVKAGDILAV 214
PA + VK DTL G++ +Y+TT+ L + N + S + G L V
Sbjct: 317 PASQTTIKVKSGDTLWGLSVKYKTTIAQLKSWNHLNSDTIFIGQNLIV 364
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.132 0.393
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 152,884,811
Number of Sequences: 539616
Number of extensions: 6727745
Number of successful extensions: 32224
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 98
Number of HSP's successfully gapped in prelim test: 546
Number of HSP's that attempted gapping in prelim test: 28932
Number of HSP's gapped (non-prelim): 3209
length of query: 415
length of database: 191,569,459
effective HSP length: 120
effective length of query: 295
effective length of database: 126,815,539
effective search space: 37410584005
effective search space used: 37410584005
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 62 (28.5 bits)