Query 014944
Match_columns 415
No_of_seqs 163 out of 430
Neff 2.7
Searched_HMMs 29240
Date Mon Mar 25 03:55:10 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014944.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/014944hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1irz_A ARR10-B; helix-turn-hel 99.9 2.7E-28 9.3E-33 190.1 5.8 60 244-304 2-61 (64)
2 2yus_A SWI/SNF-related matrix- 88.6 1.1 3.9E-05 35.2 6.5 52 244-301 13-64 (79)
3 2hzd_A Transcriptional enhance 88.5 0.28 9.7E-06 40.0 3.0 56 248-305 5-77 (82)
4 2yum_A ZZZ3 protein, zinc fing 82.6 1.8 6.1E-05 32.8 4.7 53 248-303 7-62 (75)
5 2cu7_A KIAA1915 protein; nucle 81.7 2.7 9.2E-05 31.8 5.5 50 248-303 8-57 (72)
6 1x41_A Transcriptional adaptor 75.5 2.9 9.8E-05 30.7 3.8 49 247-301 6-55 (60)
7 2cqq_A RSGI RUH-037, DNAJ homo 72.6 6.9 0.00024 30.4 5.5 48 249-302 8-58 (72)
8 2cqr_A RSGI RUH-043, DNAJ homo 72.6 10 0.00035 29.6 6.5 53 246-301 15-68 (73)
9 2xag_B REST corepressor 1; ami 71.1 4.6 0.00016 41.6 5.4 52 247-304 378-429 (482)
10 1ity_A TRF1; helix-turn-helix, 71.0 11 0.00038 28.1 6.2 54 243-299 4-57 (69)
11 2iw5_B Protein corest, REST co 68.9 6.6 0.00023 37.4 5.5 52 245-302 129-180 (235)
12 1wgx_A KIAA1903 protein; MYB D 66.6 9 0.00031 30.3 5.0 48 251-301 10-58 (73)
13 3sjm_A Telomeric repeat-bindin 62.2 17 0.00058 27.3 5.7 45 247-294 9-53 (64)
14 2elk_A SPCC24B10.08C protein; 61.2 9.3 0.00032 27.9 4.0 45 250-299 10-55 (58)
15 1guu_A C-MYB, MYB proto-oncoge 54.7 25 0.00084 24.6 5.1 46 249-299 3-48 (52)
16 2d9a_A B-MYB, MYB-related prot 52.1 41 0.0014 24.2 6.1 49 246-299 5-53 (60)
17 2eqr_A N-COR1, N-COR, nuclear 44.0 19 0.00065 26.6 3.3 45 245-295 8-52 (61)
18 1gvd_A MYB proto-oncogene prot 43.5 51 0.0018 23.0 5.3 46 249-299 3-48 (52)
19 2aje_A Telomere repeat-binding 39.2 63 0.0022 26.9 6.0 56 243-304 7-64 (105)
20 1w0t_A Telomeric repeat bindin 38.9 70 0.0024 22.5 5.5 44 249-295 2-45 (53)
21 2yqk_A Arginine-glutamic acid 35.1 32 0.0011 25.6 3.3 52 248-307 8-59 (63)
22 2dim_A Cell division cycle 5-l 34.3 95 0.0033 22.9 5.8 48 247-299 7-54 (70)
23 2cjj_A Radialis; plant develop 33.2 42 0.0014 27.3 4.0 47 250-301 9-58 (93)
24 4eef_G F-HB80.4, designed hema 30.5 20 0.00067 28.9 1.5 45 250-297 21-66 (74)
25 2roh_A RTBP1, telomere binding 26.1 1.5E+02 0.0052 25.3 6.4 55 243-303 25-81 (122)
26 2crg_A Metastasis associated p 25.2 61 0.0021 24.7 3.4 47 245-296 4-50 (70)
27 2dms_A Homeobox protein OTX2; 24.0 1.8E+02 0.006 21.8 5.8 58 242-302 4-61 (80)
28 1gv2_A C-MYB, MYB proto-oncoge 20.6 1.7E+02 0.0059 22.7 5.3 46 249-299 4-49 (105)
29 2juh_A Telomere binding protei 20.2 85 0.0029 26.8 3.7 56 242-303 10-67 (121)
No 1
>1irz_A ARR10-B; helix-turn-helix, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: a.4.1.11
Probab=99.94 E-value=2.7e-28 Score=190.12 Aligned_cols=60 Identities=47% Similarity=0.790 Sum_probs=57.1
Q ss_pred CCCCCCcccCHHHHHHHHHHHHHhCCCCCCChhHHHhhcCCCCccHHHHHHhhcccccccc
Q 014944 244 SMRAPRMRWTTTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRTVKT 304 (415)
Q Consensus 244 s~kKpRlrWT~ELH~rFV~AV~qLGG~dkAtPK~ILelM~V~gLTr~hVkSHLQKYRl~k~ 304 (415)
+.+|+||+||+|||++||+||++|| .++|+||+||++|+|+|||++||||||||||+..+
T Consensus 2 ~~~k~r~~WT~elH~~Fv~Av~~LG-~~~AtPk~Il~~M~v~gLT~~~VkSHLQKYR~~l~ 61 (64)
T 1irz_A 2 AQKKPRVLWTHELHNKFLAAVDHLG-VERAVPKKILDLMNVDKLTRENVASHLQKFRVALK 61 (64)
T ss_dssp CCCCSSCSSCHHHHHHHHHHHHHHC-TTTCCHHHHHHHHCCTTCCHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCcCCHHHHHHHHHHHHHhC-CCCCCcHHHHHHcCCCCCCHHHHHHHHHHHHHHHH
Confidence 4789999999999999999999999 79999999999999999999999999999999754
No 2
>2yus_A SWI/SNF-related matrix-associated actin- dependent regulator of chromatin subfamily...; SWI/SNF complex 155 kDa subunit, BRG1-associated factor 155; NMR {Homo sapiens}
Probab=88.58 E-value=1.1 Score=35.23 Aligned_cols=52 Identities=15% Similarity=0.119 Sum_probs=41.4
Q ss_pred CCCCCCcccCHHHHHHHHHHHHHhCCCCCCChhHHHhhcCCCCccHHHHHHhhccccc
Q 014944 244 SMRAPRMRWTTTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRT 301 (415)
Q Consensus 244 s~kKpRlrWT~ELH~rFV~AV~qLGG~dkAtPK~ILelM~V~gLTr~hVkSHLQKYRl 301 (415)
..+..+-.||.|=+.+|++||+..|+- =+.|-+.|+ +=|..+|+.|-++|-+
T Consensus 13 ~~~~~~~~WT~eEd~~Ll~~v~~~G~~----W~~IA~~v~--~RT~~qcr~r~~~~~i 64 (79)
T 2yus_A 13 KGASAGREWTEQETLLLLEALEMYKDD----WNKVSEHVG--SRTQDECILHFLRLPI 64 (79)
T ss_dssp CSSCCSCCCCHHHHHHHHHHHHHSSSC----HHHHHHHHS--SCCHHHHHHHHTTSCC
T ss_pred cccccCCCcCHHHHHHHHHHHHHhCCC----HHHHHHHcC--CCCHHHHHHHHHHhcc
Confidence 344456789999999999999999942 366777764 7899999999888733
No 3
>2hzd_A Transcriptional enhancer factor TEF-1; DNA-binding, helix-turn-helix, gene regulation; NMR {Homo sapiens}
Probab=88.49 E-value=0.28 Score=40.04 Aligned_cols=56 Identities=23% Similarity=0.298 Sum_probs=37.4
Q ss_pred CCcccCHHHHHHHHHHHHHhCCCCCCChhHHHhh---c-C-------------CCCccHHHHHHhhccccccccc
Q 014944 248 PRMRWTTTLHARFVHAVELLGGHERATPKSVLEL---M-D-------------VKDLTLAHVKSHLQMYRTVKTT 305 (415)
Q Consensus 248 pRlrWT~ELH~rFV~AV~qLGG~dkAtPK~ILel---M-~-------------V~gLTr~hVkSHLQKYRl~k~t 305 (415)
..-+|.++|-..|++|++..- . .-+=|.+|.. | | -+-=|+.+|+||||.-|..+..
T Consensus 5 ~e~vW~~~lE~aF~eaL~~yp-~-~g~~k~~ls~~gk~~gRNelIs~yI~~~tGk~RtrKQVSShiQvlk~~~~~ 77 (82)
T 2hzd_A 5 AEGVWSPDIEQSFQEALSIYP-P-CGRRKIILSDEGKMYGRNELIARYIKLRTGKTRTRKQVSSHIQVLARRKSR 77 (82)
T ss_dssp GSCCSCHHHHHHHHHHHHHSC-S-SSCCCCCHHHHCCCCCTHHHHHHHHHHHHSCCCCSHHHHHHHHHHHHHHTT
T ss_pred cCCcCCHHHHHHHHHHHHHcC-C-CCccceeecccccccchhHHHHHHHHHHHcccCCccchhHHHHHHHHHHhh
Confidence 456899999999999999884 1 1122332311 1 1 1446888999999987776543
No 4
>2yum_A ZZZ3 protein, zinc finger ZZ-type-containing protein 3; transcription, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=82.65 E-value=1.8 Score=32.83 Aligned_cols=53 Identities=15% Similarity=0.181 Sum_probs=40.2
Q ss_pred CCcccCHHHHHHHHHHHHHhCCCCCCCh---hHHHhhcCCCCccHHHHHHhhccccccc
Q 014944 248 PRMRWTTTLHARFVHAVELLGGHERATP---KSVLELMDVKDLTLAHVKSHLQMYRTVK 303 (415)
Q Consensus 248 pRlrWT~ELH~rFV~AV~qLGG~dkAtP---K~ILelM~V~gLTr~hVkSHLQKYRl~k 303 (415)
.+-.||.|=+++|++||+.+| .+...| +.|-+.| ++=|..+|+.|-|+|-...
T Consensus 7 ~~~~WT~eEd~~L~~~v~~~g-~~~~~~~~W~~IA~~~--~~Rt~~qcr~r~~~~l~~~ 62 (75)
T 2yum_A 7 GNQLWTVEEQKKLEQLLIKYP-PEEVESRRWQKIADEL--GNRTAKQVASQVQKYFIKL 62 (75)
T ss_dssp CSSCCCHHHHHHHHHHHHHSC-CCSCHHHHHHHHHHHH--SSSCHHHHHHHHHHHHGGG
T ss_pred CCCCCCHHHHHHHHHHHHHhC-CCCCCcccHHHHHHHh--CCCCHHHHHHHHHHHHHHH
Confidence 345799999999999999998 222122 3455555 6899999999999986643
No 5
>2cu7_A KIAA1915 protein; nuclear protein, SANT domain, DNA binding, regulation of transcription, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.4.1.3
Probab=81.73 E-value=2.7 Score=31.83 Aligned_cols=50 Identities=22% Similarity=0.291 Sum_probs=40.3
Q ss_pred CCcccCHHHHHHHHHHHHHhCCCCCCChhHHHhhcCCCCccHHHHHHhhccccccc
Q 014944 248 PRMRWTTTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRTVK 303 (415)
Q Consensus 248 pRlrWT~ELH~rFV~AV~qLGG~dkAtPK~ILelM~V~gLTr~hVkSHLQKYRl~k 303 (415)
.+-.||.|=++.|+++|+++|- .=+.|-..| +|=|..+|+.|-++|-..+
T Consensus 8 ~~~~WT~eEd~~l~~~~~~~G~----~W~~Ia~~~--~~Rt~~q~k~r~~~~l~~~ 57 (72)
T 2cu7_A 8 YSVKWTIEEKELFEQGLAKFGR----RWTKISKLI--GSRTVLQVKSYARQYFKNK 57 (72)
T ss_dssp CCCCCCHHHHHHHHHHHHHTCS----CHHHHHHHH--SSSCHHHHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHHCc----CHHHHHHHc--CCCCHHHHHHHHHHHHHHH
Confidence 4568999999999999999992 345666654 7899999999988885543
No 6
>1x41_A Transcriptional adaptor 2-like, isoform B; transcriptional adaptor protein2, transcriptional activation, MYB domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.4.1.1
Probab=75.45 E-value=2.9 Score=30.71 Aligned_cols=49 Identities=22% Similarity=0.252 Sum_probs=38.2
Q ss_pred CCCcccCHHHHHHHHHHHHHhC-CCCCCChhHHHhhcCCCCccHHHHHHhhccccc
Q 014944 247 APRMRWTTTLHARFVHAVELLG-GHERATPKSVLELMDVKDLTLAHVKSHLQMYRT 301 (415)
Q Consensus 247 KpRlrWT~ELH~rFV~AV~qLG-G~dkAtPK~ILelM~V~gLTr~hVkSHLQKYRl 301 (415)
..|-.||+|=.+++++||+++| +- =+.|-+.| ++=|..+|+.|-++|=.
T Consensus 6 ~~~~~WT~eED~~L~~~v~~~G~~~----W~~Ia~~~--~~Rt~~qcr~r~~~~l~ 55 (60)
T 1x41_A 6 SGDPSWTAQEEMALLEAVMDCGFGN----WQDVANQM--CTKTKEECEKHYMKYFS 55 (60)
T ss_dssp CCCSSSCHHHHHHHHHHHHHTCTTC----HHHHHHHH--TTSCHHHHHHHHHHHTT
T ss_pred CCCCCCCHHHHHHHHHHHHHHCcCc----HHHHHHHh--CCCCHHHHHHHHHHHcc
Confidence 3556799999999999999999 32 35666666 67889999988776643
No 7
>2cqq_A RSGI RUH-037, DNAJ homolog subfamily C member 1; membrane protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.4.1.3
Probab=72.63 E-value=6.9 Score=30.44 Aligned_cols=48 Identities=13% Similarity=0.277 Sum_probs=37.8
Q ss_pred CcccCHHHHHHHHHHHHHhCCCCCCChh---HHHhhcCCCCccHHHHHHhhcccccc
Q 014944 249 RMRWTTTLHARFVHAVELLGGHERATPK---SVLELMDVKDLTLAHVKSHLQMYRTV 302 (415)
Q Consensus 249 RlrWT~ELH~rFV~AV~qLGG~dkAtPK---~ILelM~V~gLTr~hVkSHLQKYRl~ 302 (415)
+-.||.|=..+|+.||..+++ -+|. +|-+.| |=|-++|+.|-+++...
T Consensus 8 ~~~WT~eE~k~fe~al~~~p~---~t~~RW~~IA~~l---gRt~~eV~~~y~~L~~d 58 (72)
T 2cqq_A 8 APEWTEEDLSQLTRSMVKFPG---GTPGRWEKIAHEL---GRSVTDVTTKAKQLKDS 58 (72)
T ss_dssp CCCCCHHHHHHHHHHHHHSCT---TCTTHHHHHHHHH---TSCHHHHHHHHHHHHHS
T ss_pred CCCCCHHHHHHHHHHHHHCCC---CCCcHHHHHHHHh---CCCHHHHHHHHHHHHHh
Confidence 447999999999999999983 3455 466676 57999999997776544
No 8
>2cqr_A RSGI RUH-043, DNAJ homolog subfamily C member 1; membrane protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.4.1.3
Probab=72.60 E-value=10 Score=29.59 Aligned_cols=53 Identities=11% Similarity=0.149 Sum_probs=39.7
Q ss_pred CCCCcccCHHHHHHHHHHHHHhCCCCCCChhHHHhh-cCCCCccHHHHHHhhccccc
Q 014944 246 RAPRMRWTTTLHARFVHAVELLGGHERATPKSVLEL-MDVKDLTLAHVKSHLQMYRT 301 (415)
Q Consensus 246 kKpRlrWT~ELH~rFV~AV~qLGG~dkAtPK~ILel-M~V~gLTr~hVkSHLQKYRl 301 (415)
+..+-.||.|=..+|++||..+| +-+|.+--.+ .-|+|=|-.+|+.|-+.+..
T Consensus 15 ~~~~~~WT~eEd~~L~~al~~~g---~~~~~rW~~IA~~vpGRT~~qcr~Ry~~L~~ 68 (73)
T 2cqr_A 15 RSAEEPWTQNQQKLLELALQQYP---RGSSDCWDKIARCVPSKSKEDCIARYKLLVS 68 (73)
T ss_dssp TCSSCCCCHHHHHHHHHHHHHSC---SSSHHHHHHHGGGCSSSCHHHHHHHHHHHHS
T ss_pred ccCCCCCCHHHHHHHHHHHHHcC---CCCCchHHHHHHHcCCCCHHHHHHHHHHHHH
Confidence 34455799999999999999998 2367654432 33479999999999776543
No 9
>2xag_B REST corepressor 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_B* 2xah_B* 2xaj_B* 2xaq_B* 2xas_B*
Probab=71.10 E-value=4.6 Score=41.60 Aligned_cols=52 Identities=23% Similarity=0.337 Sum_probs=43.1
Q ss_pred CCCcccCHHHHHHHHHHHHHhCCCCCCChhHHHhhcCCCCccHHHHHHhhcccccccc
Q 014944 247 APRMRWTTTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRTVKT 304 (415)
Q Consensus 247 KpRlrWT~ELH~rFV~AV~qLGG~dkAtPK~ILelM~V~gLTr~hVkSHLQKYRl~k~ 304 (415)
+..-+||.|=|..|++||.+.|- -=+.|-+.++-. |..+|++|-++||....
T Consensus 378 ~~~~~WT~eE~~~f~~al~~yGk----dw~~IA~~VgTK--T~~Qvk~fy~~~kkr~~ 429 (482)
T 2xag_B 378 KCNARWTTEEQLLAVQAIRKYGR----DFQAISDVIGNK--SVVQVKNFFVNYRRRFN 429 (482)
T ss_dssp CCCSCCCHHHHHHHHHHHHHHTT----CHHHHHHHHSSC--CHHHHHHHHHHTTTTTT
T ss_pred ccCCCCCHHHHHHHHHHHHHHCc----CHHHHHHHhCCC--CHHHHHHHHHHHHHHhC
Confidence 45689999999999999999982 356777776654 89999999999998643
No 10
>1ity_A TRF1; helix-turn-helix, telomeres, DNA binding, MYB domain, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Homo sapiens} SCOP: a.4.1.4 PDB: 1iv6_A
Probab=70.96 E-value=11 Score=28.07 Aligned_cols=54 Identities=13% Similarity=0.137 Sum_probs=41.2
Q ss_pred cCCCCCCcccCHHHHHHHHHHHHHhCCCCCCChhHHHhhcCCCCccHHHHHHhhccc
Q 014944 243 RSMRAPRMRWTTTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMY 299 (415)
Q Consensus 243 rs~kKpRlrWT~ELH~rFV~AV~qLGG~dkAtPK~ILelM~V~gLTr~hVkSHLQKY 299 (415)
...++.|-.||+|=-++.+++|+++|. -.=+.|.+.|...|=|-.+|+-+-..|
T Consensus 4 ~~~~~~r~~WT~eED~~L~~~v~~~G~---~~W~~Ia~~~~~~~Rt~~qcr~Rw~~~ 57 (69)
T 1ity_A 4 KHRARKRQAWLWEEDKNLRSGVRKYGE---GNWSKILLHYKFNNRTSVMLKDRWRTM 57 (69)
T ss_dssp TTCSSSCCCCCHHHHHHHHHHHHHHCS---SCHHHHHHHSCCSSCCHHHHHHHHHHH
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHCC---CcHHHHHHHcCcCCCCHHHHHHHHHHH
Confidence 346678889999999999999999981 133678888875578888888654433
No 11
>2iw5_B Protein corest, REST corepressor 1; oxidoreductase-transcription regulator complex, oxidoreductase/repressor complex, histone demethylase, FAD; HET: FAD; 2.57A {Homo sapiens} SCOP: a.4.1.3 PDB: 2uxn_B* 2uxx_B* 2y48_B* 2v1d_B* 2x0l_B*
Probab=68.86 E-value=6.6 Score=37.38 Aligned_cols=52 Identities=21% Similarity=0.388 Sum_probs=43.2
Q ss_pred CCCCCcccCHHHHHHHHHHHHHhCCCCCCChhHHHhhcCCCCccHHHHHHhhcccccc
Q 014944 245 MRAPRMRWTTTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRTV 302 (415)
Q Consensus 245 ~kKpRlrWT~ELH~rFV~AV~qLGG~dkAtPK~ILelM~V~gLTr~hVkSHLQKYRl~ 302 (415)
..+..-+||+|=++.|++|+...|- + =..|-++ |.+=|..+|+.|-.+||..
T Consensus 129 ~~k~s~~WTeEE~~lFleAl~kYGK-D---W~~IAk~--VgTKT~~QcKnfY~~~kKR 180 (235)
T 2iw5_B 129 IQKCNARWTTEEQLLAVQAIRKYGR-D---FQAISDV--IGNKSVVQVKNFFVNYRRR 180 (235)
T ss_dssp CCCCCSSCCHHHHHHHHHHHHHHSS-C---HHHHHHH--HSSCCHHHHHHHHHHTTTT
T ss_pred CCccCCCCCHHHHHHHHHHHHHHCc-C---HHHHHHH--cCCCCHHHHHHHHHHHHHH
Confidence 4467789999999999999999982 2 4667666 5789999999999999865
No 12
>1wgx_A KIAA1903 protein; MYB DNA-binding domain, human cDNA, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: a.4.1.3
Probab=66.55 E-value=9 Score=30.35 Aligned_cols=48 Identities=13% Similarity=0.095 Sum_probs=36.6
Q ss_pred ccCHHHHHHHHHHHHHhCCCCCCChhHHHh-hcCCCCccHHHHHHhhccccc
Q 014944 251 RWTTTLHARFVHAVELLGGHERATPKSVLE-LMDVKDLTLAHVKSHLQMYRT 301 (415)
Q Consensus 251 rWT~ELH~rFV~AV~qLGG~dkAtPK~ILe-lM~V~gLTr~hVkSHLQKYRl 301 (415)
.||.+=..+|.+|+..++ +.+|-+-.. ..-|+|=|.++|..|-+....
T Consensus 10 ~WT~eE~k~fe~ALa~~~---~~tp~rWe~IA~~V~gKT~eE~~~hY~~l~~ 58 (73)
T 1wgx_A 10 EWNEKELQKLHCAFASLP---KHKPGFWSEVAAAVGSRSPEECQRKYMENPR 58 (73)
T ss_dssp CCCHHHHHHHHHHHHHSC---SSSSSHHHHHHHHTTTSCHHHHHHHHHHSSS
T ss_pred CCCHHHHHHHHHHHHHCC---CCCccHHHHHHHHcCCCCHHHHHHHHHHHHh
Confidence 599999999999999997 447775543 334678999999987555433
No 13
>3sjm_A Telomeric repeat-binding factor 2; human telomeric repeat binding protein 2, telomere, telomeri homeodomain proteins amino acid sequence; HET: DNA; 1.35A {Homo sapiens} PDB: 1xg1_A 1vfc_A 1vf9_A 1w0u_A
Probab=62.23 E-value=17 Score=27.31 Aligned_cols=45 Identities=13% Similarity=0.177 Sum_probs=35.0
Q ss_pred CCCcccCHHHHHHHHHHHHHhCCCCCCChhHHHhhcCCCCccHHHHHH
Q 014944 247 APRMRWTTTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKS 294 (415)
Q Consensus 247 KpRlrWT~ELH~rFV~AV~qLGG~dkAtPK~ILelM~V~gLTr~hVkS 294 (415)
+.|-.||+|=-++.+++|++.|. -.=+.|.+.+.+.|=|-.+++-
T Consensus 9 ~kk~~WT~eED~~L~~~V~~~G~---~~W~~Ia~~~~~~~Rt~~qcr~ 53 (64)
T 3sjm_A 9 TKKQKWTVEESEWVKAGVQKYGE---GNWAAISKNYPFVNRTAVMIKD 53 (64)
T ss_dssp -CCCCCCHHHHHHHHHHHHHHCT---TCHHHHHHHSCCSSCCHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHHHccCC---CchHHHHhhcCCCCCCHHHHHH
Confidence 34567999999999999999982 1245788887777888888873
No 14
>2elk_A SPCC24B10.08C protein; hypothetical protein, structural genomics, NPPSFA; NMR {Schizosaccharomyces pombe}
Probab=61.25 E-value=9.3 Score=27.91 Aligned_cols=45 Identities=18% Similarity=0.273 Sum_probs=34.1
Q ss_pred cccCHHHHHHHHHHHHHhC-CCCCCChhHHHhhcCCCCccHHHHHHhhccc
Q 014944 250 MRWTTTLHARFVHAVELLG-GHERATPKSVLELMDVKDLTLAHVKSHLQMY 299 (415)
Q Consensus 250 lrWT~ELH~rFV~AV~qLG-G~dkAtPK~ILelM~V~gLTr~hVkSHLQKY 299 (415)
-.||+|=.+++++||++.| +- =+.|-+.|+. +=|..+++.|-++|
T Consensus 10 ~~WT~eED~~L~~~v~~~G~~~----W~~IA~~~~~-~Rt~~qcr~r~~~~ 55 (58)
T 2elk_A 10 ENWGADEELLLIDACETLGLGN----WADIADYVGN-ARTKEECRDHYLKT 55 (58)
T ss_dssp CCCCHHHHHHHHHHHHHTTTTC----HHHHHHHHCS-SCCHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHCcCC----HHHHHHHHCC-CCCHHHHHHHHHHH
Confidence 3699999999999999999 33 3455555542 67888888877665
No 15
>1guu_A C-MYB, MYB proto-oncogene protein; transcription, transcription regulation, DNA binding, ION bindi proto-oncogene, nuclear protein, activator; 1.6A {Mus musculus} SCOP: a.4.1.3 PDB: 1mbe_A 1mbf_A
Probab=54.71 E-value=25 Score=24.59 Aligned_cols=46 Identities=20% Similarity=0.250 Sum_probs=34.8
Q ss_pred CcccCHHHHHHHHHHHHHhCCCCCCChhHHHhhcCCCCccHHHHHHhhccc
Q 014944 249 RMRWTTTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMY 299 (415)
Q Consensus 249 RlrWT~ELH~rFV~AV~qLGG~dkAtPK~ILelM~V~gLTr~hVkSHLQKY 299 (415)
|-.||+|=..+++++|+++|. ..=+.|.+.| +|=|-.+|+-+-++|
T Consensus 3 ~~~Wt~eED~~L~~~v~~~G~---~~W~~Ia~~~--~~Rt~~qcr~Rw~~~ 48 (52)
T 1guu_A 3 KTRWTREEDEKLKKLVEQNGT---DDWKVIANYL--PNRTDVQCQHRWQKV 48 (52)
T ss_dssp CCCCCHHHHHHHHHHHHHHCS---SCHHHHHHTS--TTCCHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHhCC---CCHHHHHHHc--CCCCHHHHHHHHHHH
Confidence 457999999999999999982 2346666665 577888888765544
No 16
>2d9a_A B-MYB, MYB-related protein B; DNA binding, structural genomics, unknown function, NPPSFA; NMR {Mus musculus}
Probab=52.09 E-value=41 Score=24.15 Aligned_cols=49 Identities=12% Similarity=0.133 Sum_probs=36.4
Q ss_pred CCCCcccCHHHHHHHHHHHHHhCCCCCCChhHHHhhcCCCCccHHHHHHhhccc
Q 014944 246 RAPRMRWTTTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMY 299 (415)
Q Consensus 246 kKpRlrWT~ELH~rFV~AV~qLGG~dkAtPK~ILelM~V~gLTr~hVkSHLQKY 299 (415)
...|-.||+|=.++++++|+++|- -.=+.|.+.| ++=|-.+|+.+-.+|
T Consensus 5 ~~~k~~Wt~eED~~L~~~v~~~G~---~~W~~Ia~~~--~~Rt~~qcr~Rw~~~ 53 (60)
T 2d9a_A 5 SSGKVKWTHEEDEQLRALVRQFGQ---QDWKFLASHF--PNRTDQQCQYRWLRV 53 (60)
T ss_dssp CCCCSCCCHHHHHHHHHHHHHTCT---TCHHHHHHHC--SSSCHHHHHHHHHHT
T ss_pred CCCCCCCCHHHHHHHHHHHHHhCC---CCHHHHHHHc--cCCCHHHHHHHHHHH
Confidence 446678999999999999999982 1235566665 577888888776554
No 17
>2eqr_A N-COR1, N-COR, nuclear receptor corepressor 1; SANT domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=44.00 E-value=19 Score=26.55 Aligned_cols=45 Identities=9% Similarity=-0.041 Sum_probs=34.1
Q ss_pred CCCCCcccCHHHHHHHHHHHHHhCCCCCCChhHHHhhcCCCCccHHHHHHh
Q 014944 245 MRAPRMRWTTTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSH 295 (415)
Q Consensus 245 ~kKpRlrWT~ELH~rFV~AV~qLGG~dkAtPK~ILelM~V~gLTr~hVkSH 295 (415)
.|+..-.||+|=|+.|++|+.+.|- + =..|-++ |++=|..+|..|
T Consensus 8 ~r~~~~~WT~eE~~~F~~~~~~~gk--~--w~~Ia~~--l~~rt~~~~v~~ 52 (61)
T 2eqr_A 8 DRQFMNVWTDHEKEIFKDKFIQHPK--N--FGLIASY--LERKSVPDCVLY 52 (61)
T ss_dssp CCSCCCSCCHHHHHHHHHHHHHSTT--C--HHHHHHH--CTTSCHHHHHHH
T ss_pred ccccCCCCCHHHHHHHHHHHHHhCC--C--HHHHHHH--cCCCCHHHHHHH
Confidence 4456678999999999999999982 2 3556555 467888888754
No 18
>1gvd_A MYB proto-oncogene protein; transcription, transcription regulation, C-MYB, DNA binding, ION binding, nuclear protein; 1.45A {Mus musculus} SCOP: a.4.1.3 PDB: 1gv5_A 1mbg_A 1mbh_A
Probab=43.46 E-value=51 Score=22.97 Aligned_cols=46 Identities=13% Similarity=0.173 Sum_probs=33.9
Q ss_pred CcccCHHHHHHHHHHHHHhCCCCCCChhHHHhhcCCCCccHHHHHHhhccc
Q 014944 249 RMRWTTTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMY 299 (415)
Q Consensus 249 RlrWT~ELH~rFV~AV~qLGG~dkAtPK~ILelM~V~gLTr~hVkSHLQKY 299 (415)
|-.||+|=.++++++|++.|. ..=+.|.+.| +|=|..+|+.+-.+|
T Consensus 3 k~~Wt~eED~~L~~~v~~~G~---~~W~~Ia~~~--~~Rt~~qcr~Rw~~~ 48 (52)
T 1gvd_A 3 KGPWTKEEDQRLIKLVQKYGP---KRWSVIAKHL--KGRIGKQCRERWHNH 48 (52)
T ss_dssp CCSCCHHHHHHHHHHHHHHCT---TCHHHHHTTS--TTCCHHHHHHHHHHT
T ss_pred CCCCCHHHHHHHHHHHHHHCc---ChHHHHHHHc--CCCCHHHHHHHHHHH
Confidence 457999999999999999982 1234565555 577888888765554
No 19
>2aje_A Telomere repeat-binding protein; DNA-binding, Trp, MYB motif, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: a.4.1.3
Probab=39.18 E-value=63 Score=26.91 Aligned_cols=56 Identities=21% Similarity=0.191 Sum_probs=41.2
Q ss_pred cCCCCCCcccCHHHHHHHHHHHHHhCCCCCCChhHHHhhcC--CCCccHHHHHHhhcccccccc
Q 014944 243 RSMRAPRMRWTTTLHARFVHAVELLGGHERATPKSVLELMD--VKDLTLAHVKSHLQMYRTVKT 304 (415)
Q Consensus 243 rs~kKpRlrWT~ELH~rFV~AV~qLGG~dkAtPK~ILelM~--V~gLTr~hVkSHLQKYRl~k~ 304 (415)
...++.|-.||+|=-+..+++|+++|. -.=+.|++.+. .++=|--+||- |||...+
T Consensus 7 ~~~rr~r~~WT~EEd~~L~~gV~k~G~---g~W~~I~~~~~~~f~~RT~v~lKd---rWrnllk 64 (105)
T 2aje_A 7 DPQRRIRRPFSVAEVEALVQAVEKLGT---GRWRDVKLCAFEDADHRTYVDLKD---KWKTLVH 64 (105)
T ss_dssp --CCCCCCSCCHHHHHHHHHHHHHHCS---SSHHHHHSSSSSSTTCCCHHHHHH---HHHHHHH
T ss_pred ccCCCCCCCCCHHHHHHHHHHHHHhCC---CChHHHHHHhccccCCCCHHHHHH---HHHHHHh
Confidence 347788999999999999999999993 12356777652 37888888884 4666543
No 20
>1w0t_A Telomeric repeat binding factor 1; telomere, DNA-binding protein, homeodomain, mitosis, cell cycle; 2.00A {Homo sapiens} SCOP: a.4.1.4 PDB: 1ba5_A
Probab=38.92 E-value=70 Score=22.47 Aligned_cols=44 Identities=16% Similarity=0.175 Sum_probs=33.7
Q ss_pred CcccCHHHHHHHHHHHHHhCCCCCCChhHHHhhcCCCCccHHHHHHh
Q 014944 249 RMRWTTTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSH 295 (415)
Q Consensus 249 RlrWT~ELH~rFV~AV~qLGG~dkAtPK~ILelM~V~gLTr~hVkSH 295 (415)
|-.||+|=.+..+++|+..|. -.=+.|.+.|+..|=|-.+++-+
T Consensus 2 r~~WT~eEd~~L~~~v~~~G~---~~W~~Ia~~~~~~~Rt~~qcr~R 45 (53)
T 1w0t_A 2 RQAWLWEEDKNLRSGVRKYGE---GNWSKILLHYKFNNRTSVMLKDR 45 (53)
T ss_dssp CCCCCHHHHHHHHHHHHHHCT---TCHHHHHHHSCCSSCCHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHCc---CCHHHHHHHcCCCCCCHHHHHHH
Confidence 457999999999999999992 13466777776557778887754
No 21
>2yqk_A Arginine-glutamic acid dipeptide repeats protein; structure genomics, SANT domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=35.11 E-value=32 Score=25.65 Aligned_cols=52 Identities=17% Similarity=0.231 Sum_probs=34.7
Q ss_pred CCcccCHHHHHHHHHHHHHhCCCCCCChhHHHhhcCCCCccHHHHHHhhcccccccccCc
Q 014944 248 PRMRWTTTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRTVKTTDR 307 (415)
Q Consensus 248 pRlrWT~ELH~rFV~AV~qLGG~dkAtPK~ILelM~V~gLTr~hVkSHLQKYRl~k~td~ 307 (415)
.+-.||+|=+++|.+|+.+.| -+ =..|...| |+.-|..+|.. -|=..|++++
T Consensus 8 ~~~~WT~eE~~~Fe~~l~~yG-Kd---f~~I~~~~-v~~Kt~~~~v~---fYY~wKkt~~ 59 (63)
T 2yqk_A 8 IEKCWTEDEVKRFVKGLRQYG-KN---FFRIRKEL-LPNKETGELIT---FYYYWKKTSG 59 (63)
T ss_dssp CCCSCCHHHHHHHHHHHHHTC-SC---HHHHHHHS-CTTSCHHHHHH---HHHHHHCSSC
T ss_pred CCCCcCHHHHHHHHHHHHHhC-cc---HHHHHHHH-cCCCcHHHHHH---HHhcccCCCC
Confidence 456899999999999999998 22 23444311 56677777764 3445555543
No 22
>2dim_A Cell division cycle 5-like protein; MYB_DNA-binding domain, cell cycle, DNA binding, spliceosome, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=34.35 E-value=95 Score=22.92 Aligned_cols=48 Identities=15% Similarity=0.138 Sum_probs=36.9
Q ss_pred CCCcccCHHHHHHHHHHHHHhCCCCCCChhHHHhhcCCCCccHHHHHHhhccc
Q 014944 247 APRMRWTTTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMY 299 (415)
Q Consensus 247 KpRlrWT~ELH~rFV~AV~qLGG~dkAtPK~ILelM~V~gLTr~hVkSHLQKY 299 (415)
..|-.||+|=-++++++|.++|- ..=+.|-+.|+ +=|..+|+-+-..|
T Consensus 7 ~k~~~Wt~eED~~L~~~v~~~G~---~~W~~Ia~~l~--~Rt~~qcr~Rw~~~ 54 (70)
T 2dim_A 7 GKGGVWRNTEDEILKAAVMKYGK---NQWSRIASLLH--RKSAKQCKARWYEW 54 (70)
T ss_dssp STTCCCCHHHHHHHHHHHHHTCS---SCHHHHHHHST--TCCHHHHHHHHHHT
T ss_pred CCCCCCCHHHHHHHHHHHHHHCc---CCHHHHHHHhc--CCCHHHHHHHHHHH
Confidence 34568999999999999999981 23466777765 77888998776555
No 23
>2cjj_A Radialis; plant development, DNA-binding protein, MYB transcription FA DNA-binding, nuclear protein, floral asymmetry; 1.9A {Antirrhinum majus} SCOP: a.4.1.3
Probab=33.24 E-value=42 Score=27.28 Aligned_cols=47 Identities=21% Similarity=0.372 Sum_probs=37.0
Q ss_pred cccCHHHHHHHHHHHHHhCCCCCCChh---HHHhhcCCCCccHHHHHHhhccccc
Q 014944 250 MRWTTTLHARFVHAVELLGGHERATPK---SVLELMDVKDLTLAHVKSHLQMYRT 301 (415)
Q Consensus 250 lrWT~ELH~rFV~AV~qLGG~dkAtPK---~ILelM~V~gLTr~hVkSHLQKYRl 301 (415)
-.||.|=.+.|++||..+| . -+|. .|-+.| +|=|.++|+.|-+++..
T Consensus 9 ~~WT~eEd~~L~~al~~~~-~--~~~~rW~~IA~~v--pGRT~~q~k~ry~~l~~ 58 (93)
T 2cjj_A 9 RPWSAKENKAFERALAVYD-K--DTPDRWANVARAV--EGRTPEEVKKHYEILVE 58 (93)
T ss_dssp CSCCHHHHHHHHHHHHHSC-T--TCTTHHHHHHHHS--TTCCHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHcC-C--CCCchHHHHHHHc--CCCCHHHHHHHHHHHHH
Confidence 4699999999999999998 2 2554 455554 69999999999887654
No 24
>4eef_G F-HB80.4, designed hemagglutinin binding protein; immunoglobulin, fusion of virus membrane with membrane, membrane fusion, sialic acid, virion; HET: NAG BMA; 2.70A {Artificial gene}
Probab=30.52 E-value=20 Score=28.91 Aligned_cols=45 Identities=24% Similarity=0.321 Sum_probs=34.2
Q ss_pred cccCHHHHHHHHHHHHHhCCCCCCChhHHHhh-cCCCCccHHHHHHhhc
Q 014944 250 MRWTTTLHARFVHAVELLGGHERATPKSVLEL-MDVKDLTLAHVKSHLQ 297 (415)
Q Consensus 250 lrWT~ELH~rFV~AV~qLGG~dkAtPK~ILel-M~V~gLTr~hVkSHLQ 297 (415)
-.||.+=.+.|..|+...+ +-+|.+--.+ --|+|=|.+.|+.|-|
T Consensus 21 ~~WT~eE~K~FE~ALa~yp---~~tpdRWekIA~~VpGKT~eEVk~hY~ 66 (74)
T 4eef_G 21 RPWKFSENIAFEIALSFTN---KDTPDRWKKVAQYVKGRTPEEVKKHYE 66 (74)
T ss_dssp -CCCTTHHHHHHHHTSSSC---SSCCSSSTTTGGGSCSSCHHHHHGGGC
T ss_pred CCCCHHHHHHHHHHHHHCC---CCCCcHHHHHHHHcCCCCHHHHHHHHH
Confidence 3699999999999998886 4566654332 3357899999999865
No 25
>2roh_A RTBP1, telomere binding protein-1; plant, nucleus, DNA binding protein; NMR {Oryza sativa}
Probab=26.05 E-value=1.5e+02 Score=25.26 Aligned_cols=55 Identities=25% Similarity=0.224 Sum_probs=41.3
Q ss_pred cCCCCCCcccCHHHHHHHHHHHHHhCCCCCCChhHHHhhc--CCCCccHHHHHHhhccccccc
Q 014944 243 RSMRAPRMRWTTTLHARFVHAVELLGGHERATPKSVLELM--DVKDLTLAHVKSHLQMYRTVK 303 (415)
Q Consensus 243 rs~kKpRlrWT~ELH~rFV~AV~qLGG~dkAtPK~ILelM--~V~gLTr~hVkSHLQKYRl~k 303 (415)
...+|.|-.||.|=-+..+++|+++|. -.=+.|++.+ ..++=|--++| .|||...
T Consensus 25 ~~~rr~r~~WT~EEd~~L~~gV~k~G~---g~W~~I~~~~~~~~~~RT~vdlK---dRWrnll 81 (122)
T 2roh_A 25 FGQRRIRRPFTVAEVELLVEAVEHLGT---GRWRDVKFRAFENVHHRTYVDLK---DKWKTLV 81 (122)
T ss_dssp CCCCCCCCCCCHHHHHHHHHHHHHHSS---SCHHHHHHHHHSSSCCCCHHHHH---HHHHHHH
T ss_pred cCCCCCCCCCCHHHHHHHHHHHHHHCC---CChHHHHHHhccccCCCCHHHHH---HHHHHHH
Confidence 457788899999999999999999992 1234676654 34788888888 4566654
No 26
>2crg_A Metastasis associated protein MTA3; transcription factor, helix turn helix, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.4.1.3
Probab=25.23 E-value=61 Score=24.71 Aligned_cols=47 Identities=13% Similarity=0.162 Sum_probs=33.7
Q ss_pred CCCCCcccCHHHHHHHHHHHHHhCCCCCCChhHHHhhcCCCCccHHHHHHhh
Q 014944 245 MRAPRMRWTTTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHL 296 (415)
Q Consensus 245 ~kKpRlrWT~ELH~rFV~AV~qLGG~dkAtPK~ILelM~V~gLTr~hVkSHL 296 (415)
.|+..-.||+|=+..|.+|+...| -+ =..|-..| |+.-|..+|..+-
T Consensus 4 ~r~~~~~WT~eE~~~Fe~~l~~yG-Kd---f~~I~~~~-v~~Kt~~~~v~fY 50 (70)
T 2crg_A 4 GSSGMEEWSASEACLFEEALEKYG-KD---FNDIRQDF-LPWKSLTSIIEYY 50 (70)
T ss_dssp CCCSSCCCCHHHHHHHHHHHHHTC-SC---HHHHHHTT-CSSSCHHHHHHHH
T ss_pred cccCCCCCCHHHHHHHHHHHHHhC-cc---HHHHHHHH-cCCCCHHHHHHHH
Confidence 456667899999999999999998 22 24444311 5777877777554
No 27
>2dms_A Homeobox protein OTX2; homeobox domain, three helices with the DNA binding helix- turn-helix motif, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=23.97 E-value=1.8e+02 Score=21.80 Aligned_cols=58 Identities=16% Similarity=-0.004 Sum_probs=40.2
Q ss_pred ccCCCCCCcccCHHHHHHHHHHHHHhCCCCCCChhHHHhhcCCCCccHHHHHHhhcccccc
Q 014944 242 KRSMRAPRMRWTTTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRTV 302 (415)
Q Consensus 242 krs~kKpRlrWT~ELH~rFV~AV~qLGG~dkAtPK~ILelM~V~gLTr~hVkSHLQKYRl~ 302 (415)
....|+.|.++|.+--.. ++.+.... ...+...+.++...=||+..+|+.=.|.-|..
T Consensus 4 ~~~~rr~Rt~ft~~Q~~~-Le~~F~~~--~yp~~~~r~~La~~l~l~~~qV~~WFqNRR~k 61 (80)
T 2dms_A 4 GSSGRRERTTFTRAQLDV-LEALFAKT--RYPDIFMREEVALKINLPESRVQVWFKNRRAK 61 (80)
T ss_dssp CCCCCCCCSSCCHHHHHH-HHHHHHHC--SSCCHHHHHHHHHHTTCCHHHHHHHHHHHHTH
T ss_pred CCCCCCCCCCCCHHHHHH-HHHHHHcc--CCCCHHHHHHHHHHHCcCHHHhhhhhHHHhHH
Confidence 345778899999874443 33443433 35666667777777789999999888877764
No 28
>1gv2_A C-MYB, MYB proto-oncogene protein; transcription, DNA binding, ION binding; 1.68A {Mus musculus} SCOP: a.4.1.3 a.4.1.3 PDB: 1mse_C* 1msf_C* 1a5j_A 1idy_A 1idz_A 1mbj_A 1mbk_A
Probab=20.64 E-value=1.7e+02 Score=22.75 Aligned_cols=46 Identities=13% Similarity=0.159 Sum_probs=35.0
Q ss_pred CcccCHHHHHHHHHHHHHhCCCCCCChhHHHhhcCCCCccHHHHHHhhccc
Q 014944 249 RMRWTTTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMY 299 (415)
Q Consensus 249 RlrWT~ELH~rFV~AV~qLGG~dkAtPK~ILelM~V~gLTr~hVkSHLQKY 299 (415)
+-.||+|=-++++++|+..|. -.=+.|-+.| +|=|..+|+.+-.+|
T Consensus 4 k~~WT~eED~~L~~~v~~~g~---~~W~~Ia~~l--~~Rt~~qcr~Rw~~~ 49 (105)
T 1gv2_A 4 KGPWTKEEDQRVIKLVQKYGP---KRWSVIAKHL--KGRIGKQCRERWHNH 49 (105)
T ss_dssp CSCCCHHHHHHHHHHHHHHCT---TCHHHHHTTS--TTCCHHHHHHHHHHT
T ss_pred CCCCCHHHHHHHHHHHHHhCC---CcHHHHhhhh--cCCCHHHHHHHHHhc
Confidence 447999999999999999983 1234676666 688888988765554
No 29
>2juh_A Telomere binding protein TBP1; helix, nucleus, nuclear protein; NMR {Nicotiana glutinosa}
Probab=20.22 E-value=85 Score=26.80 Aligned_cols=56 Identities=23% Similarity=0.196 Sum_probs=41.5
Q ss_pred ccCCCCCCcccCHHHHHHHHHHHHHhCCCCCCChhHHHhhcC--CCCccHHHHHHhhccccccc
Q 014944 242 KRSMRAPRMRWTTTLHARFVHAVELLGGHERATPKSVLELMD--VKDLTLAHVKSHLQMYRTVK 303 (415)
Q Consensus 242 krs~kKpRlrWT~ELH~rFV~AV~qLGG~dkAtPK~ILelM~--V~gLTr~hVkSHLQKYRl~k 303 (415)
+.+.++.|-.||.|=-+..+++|+++|. -.=+.|++.+. .+|=|--+||- |||...
T Consensus 10 ~~~~rr~r~~WT~EEd~~L~~gV~k~G~---G~W~~Ia~~~~~~f~~RT~v~lKd---RWrnll 67 (121)
T 2juh_A 10 ELSQRRIRRPFSVAEVEALVEAVEHLGT---GRWRDVKMRAFDNADHRTYVDLKD---KWKTLV 67 (121)
T ss_dssp CCCCCCSSCCCCHHHHHHHHHHHHHHGG---GCHHHHHHHHCSCCSSCCSHHHHH---HHHHHH
T ss_pred cccCCCCCCCCCHHHHHHHHHHHHHHCC---CCHHHHHHHhccccCCCCHHHHHH---HHHHHH
Confidence 3457788999999999999999999992 12356777664 37888888884 455543
Done!