BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 014948
(415 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2VE3|A Chain A, Retinoic Acid Bound Cyanobacterial Cyp120a1
pdb|2VE3|B Chain B, Retinoic Acid Bound Cyanobacterial Cyp120a1
pdb|2VE4|A Chain A, Substrate Free Cyanobacterial Cyp120a1
pdb|2VE4|B Chain B, Substrate Free Cyanobacterial Cyp120a1
Length = 444
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 76/347 (21%), Positives = 138/347 (39%), Gaps = 30/347 (8%)
Query: 43 LPPGDMGWPFLGNMPSFLRAYRSNNPETFIDSIVERYGRTGVYKTHLFGNPSIIVSSPQT 102
+PPGD G P+LG +FL N F +++G ++KT LFG I +S
Sbjct: 13 IPPGDFGLPWLGETLNFL------NDGDFGKKRQQQFG--PIFKTRLFGKNVIFISGALA 64
Query: 103 CRRVLM-DDEKFGLGYGKSMTRLAGKNTFVNIAKSEHRRLRKMMTSLMISHEALVMYIGN 161
R + + E F + S L G N HR RK++ + L Y+
Sbjct: 65 NRFLFTKEQETFQATWPLSTRILLGPNALATQMGEIHRSRRKILYQAFLPR-TLDSYLPK 123
Query: 162 TEDVAIASLEEWAAASKDEPIEFFCETSKLSLKFIMRILFG---STSDSIFSSVEKHYID 218
+ + LE+W A++ + ++ + +++ + G S + +F E +
Sbjct: 124 MDGIVQGYLEQWGKANE---VIWYPQLRRMTFDVAATLFMGEKVSQNPQLFPWFETYI-- 178
Query: 219 VHDGVHSTAINLPGFAFHKALKARKMLVKILQKVVDERKAMKKNGEQTAKRGMIDLMMEI 278
G+ S I LP F K+ +AR +L+ L+K++ R+ + E + +++
Sbjct: 179 --QGLFSLPIPLPNTLFGKSQRARALLLAELEKIIKARQQQPPSEEDA-----LGILLAA 231
Query: 279 EDESGKKLQDEXXXXXXXXXXXGAHDGPTHTIMWATIYLYGHPXXXXXXXXXXXXXXXTR 338
D++ + L H+ T + + L H +
Sbjct: 232 RDDNNQPLSLPELKDQILLLLFAGHETLTSALSSFCLLLGQHSDIRERVRQEQNKLQLS- 290
Query: 339 PSSQKGLSLQEIKQMEYLSKVIDETLRLMNLPFLDFREAKTDANIKG 385
+ L+ + +K+M YL +V+ E LRL+ FRE D +G
Sbjct: 291 ----QELTAETLKKMPYLDQVLQEVLRLIPPVGGGFRELIQDCQFQG 333
>pdb|1W0E|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|1W0F|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|1W0G|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|2J0D|A Chain A, Crystal Structure Of Human P450 3a4 In Complex With
Erythromycin
pdb|2J0D|B Chain B, Crystal Structure Of Human P450 3a4 In Complex With
Erythromycin
pdb|2V0M|A Chain A, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|B Chain B, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|C Chain C, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|D Chain D, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|3NXU|A Chain A, Crystal Structure Of Human Cytochrome P4503a4 Bound To An
Inhibitor Ritonavir
pdb|3NXU|B Chain B, Crystal Structure Of Human Cytochrome P4503a4 Bound To An
Inhibitor Ritonavir
Length = 485
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 79/372 (21%), Positives = 133/372 (35%), Gaps = 50/372 (13%)
Query: 45 PGDMGWPFLGNMPSFLRAYRSNNPETFIDSIVERYGRT-GVYKTHLFGNPSIIVSSP--- 100
PG PFLGN+ S+ + + + E ++YG+ G Y P + ++ P
Sbjct: 17 PGPTPLPFLGNILSYHKGFCMFDMECH-----KKYGKVWGFYDGQ---QPVLAITDPDMI 68
Query: 101 -----QTCRRVLMDDEKFG-LGYGKSMTRLAGKNTFVNIAKSEHRRLRKMMTSLMISHE- 153
+ C V + FG +G+ KS +A E +RLR +++ S +
Sbjct: 69 KTVLVKECYSVFTNRRPFGPVGFMKSAISIA--------EDEEWKRLRSLLSPTFTSGKL 120
Query: 154 -ALVMYIGNTEDVAIASLEEWAAASKDEPIEFFCETSKLSLKFIMRILFGSTSDSIFSSV 212
+V I DV + +L A K P+ S+ I FG DS+ +
Sbjct: 121 KEMVPIIAQYGDVLVRNLRREAETGK--PVTLKDVFGAYSMDVITSTSFGVNIDSLNNPQ 178
Query: 213 EKHYIDVH-----DGVHSTAINLPGFAFH-KALKARKMLV------KILQKVVDERKAMK 260
+ + D + +++ F F L+ + V L+K V K +
Sbjct: 179 DPFVENTKKLLRFDFLDPFFLSITVFPFLIPILEVLNICVFPREVTNFLRKSVKRMKESR 238
Query: 261 KNGEQTAKRGMIDLMMEI----EDESGKKLQDEXXXXXXXXXXXGAHDGPTHTIMWATIY 316
Q + + LM++ E ES K L D ++ + + +
Sbjct: 239 LEDTQKHRVDFLQLMIDSQNSKETESHKALSDLELVAQSIIFIFAGYETTSSVLSFIMYE 298
Query: 317 LYGHPXXXXXXXXXXXXXXXTRPSSQKGLSLQEIKQMEYLSKVIDETLRLMNLPFLDFRE 376
L HP + + + QMEYL V++ETLRL + R
Sbjct: 299 LATHPDVQQKLQEEIDAVLPNKAPP----TYDTVLQMEYLDMVVNETLRLFPIAMRLERV 354
Query: 377 AKTDANIKGQLL 388
K D I G +
Sbjct: 355 CKKDVEINGMFI 366
>pdb|1TQN|A Chain A, Crystal Structure Of Human Microsomal P450 3a4
Length = 486
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 79/372 (21%), Positives = 133/372 (35%), Gaps = 50/372 (13%)
Query: 45 PGDMGWPFLGNMPSFLRAYRSNNPETFIDSIVERYGRT-GVYKTHLFGNPSIIVSSP--- 100
PG PFLGN+ S+ + + + E ++YG+ G Y P + ++ P
Sbjct: 18 PGPTPLPFLGNILSYHKGFCMFDMECH-----KKYGKVWGFYDGQ---QPVLAITDPDMI 69
Query: 101 -----QTCRRVLMDDEKFG-LGYGKSMTRLAGKNTFVNIAKSEHRRLRKMMTSLMISHE- 153
+ C V + FG +G+ KS +A E +RLR +++ S +
Sbjct: 70 KTVLVKECYSVFTNRRPFGPVGFMKSAISIA--------EDEEWKRLRSLLSPTFTSGKL 121
Query: 154 -ALVMYIGNTEDVAIASLEEWAAASKDEPIEFFCETSKLSLKFIMRILFGSTSDSIFSSV 212
+V I DV + +L A K P+ S+ I FG DS+ +
Sbjct: 122 KEMVPIIAQYGDVLVRNLRREAETGK--PVTLKDVFGAYSMDVITSTSFGVNIDSLNNPQ 179
Query: 213 EKHYIDVH-----DGVHSTAINLPGFAFH-KALKARKMLV------KILQKVVDERKAMK 260
+ + D + +++ F F L+ + V L+K V K +
Sbjct: 180 DPFVENTKKLLRFDFLDPFFLSITVFPFLIPILEVLNICVFPREVTNFLRKSVKRMKESR 239
Query: 261 KNGEQTAKRGMIDLMMEI----EDESGKKLQDEXXXXXXXXXXXGAHDGPTHTIMWATIY 316
Q + + LM++ E ES K L D ++ + + +
Sbjct: 240 LEDTQKHRVDFLQLMIDSQNSKETESHKALSDLELVAQSIIFIFAGYETTSSVLSFIMYE 299
Query: 317 LYGHPXXXXXXXXXXXXXXXTRPSSQKGLSLQEIKQMEYLSKVIDETLRLMNLPFLDFRE 376
L HP + + + QMEYL V++ETLRL + R
Sbjct: 300 LATHPDVQQKLQEEIDAVLPNKAPP----TYDTVLQMEYLDMVVNETLRLFPIAMRLERV 355
Query: 377 AKTDANIKGQLL 388
K D I G +
Sbjct: 356 CKKDVEINGMFI 367
>pdb|3UA1|A Chain A, Crystal Structure Of The Cytochrome
P4503a4-Bromoergocryptine Complex
pdb|3TJS|A Chain A, Crystal Structure Of The Complex Between Human Cytochrome
P450 3a4 And Desthiazolylmethyloxycarbonyl Ritonavir
Length = 487
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 79/372 (21%), Positives = 133/372 (35%), Gaps = 50/372 (13%)
Query: 45 PGDMGWPFLGNMPSFLRAYRSNNPETFIDSIVERYGRT-GVYKTHLFGNPSIIVSSP--- 100
PG PFLGN+ S+ + + + E ++YG+ G Y P + ++ P
Sbjct: 19 PGPTPLPFLGNILSYHKGFCMFDMECH-----KKYGKVWGFYDGQ---QPVLAITDPDMI 70
Query: 101 -----QTCRRVLMDDEKFG-LGYGKSMTRLAGKNTFVNIAKSEHRRLRKMMTSLMISHE- 153
+ C V + FG +G+ KS +A E +RLR +++ S +
Sbjct: 71 KTVLVKECYSVFTNRRPFGPVGFMKSAISIA--------EDEEWKRLRSLLSPTFTSGKL 122
Query: 154 -ALVMYIGNTEDVAIASLEEWAAASKDEPIEFFCETSKLSLKFIMRILFGSTSDSIFSSV 212
+V I DV + +L A K P+ S+ I FG DS+ +
Sbjct: 123 KEMVPIIAQYGDVLVRNLRREAETGK--PVTLKDVFGAYSMDVITSTSFGVNIDSLNNPQ 180
Query: 213 EKHYIDVH-----DGVHSTAINLPGFAFH-KALKARKMLV------KILQKVVDERKAMK 260
+ + D + +++ F F L+ + V L+K V K +
Sbjct: 181 DPFVENTKKLLRFDFLDPFFLSITVFPFLIPILEVLNICVFPREVTNFLRKSVKRMKESR 240
Query: 261 KNGEQTAKRGMIDLMMEI----EDESGKKLQDEXXXXXXXXXXXGAHDGPTHTIMWATIY 316
Q + + LM++ E ES K L D ++ + + +
Sbjct: 241 LEDTQKHRVDFLQLMIDSQNSKETESHKALSDLELVAQSIIFIFAGYETTSSVLSFIMYE 300
Query: 317 LYGHPXXXXXXXXXXXXXXXTRPSSQKGLSLQEIKQMEYLSKVIDETLRLMNLPFLDFRE 376
L HP + + + QMEYL V++ETLRL + R
Sbjct: 301 LATHPDVQQKLQEEIDAVLPNKAPP----TYDTVLQMEYLDMVVNETLRLFPIAMRLERV 356
Query: 377 AKTDANIKGQLL 388
K D I G +
Sbjct: 357 CKKDVEINGMFI 368
>pdb|1EA1|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Complex With Fluconazole
pdb|1E9X|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Complex With 4-
Phenylimidazole
pdb|1H5Z|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Ferric Low-Spin State
Length = 455
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 54/271 (19%), Positives = 105/271 (38%), Gaps = 17/271 (6%)
Query: 121 MTRLAGKNTFVNIAKSEHRRLRKMMTSLMISHEALVMYIGNTEDVAIASLEEWAAASKDE 180
MT + G+ + + R ++M+ + + E + + ED + +W A + +
Sbjct: 79 MTPIFGEGVVFDASPE---RRKEMLHNAALRGEQMKGHAATIEDQVRRMIADWGEAGEID 135
Query: 181 PIEFFCETSKLSLKFIMRILFGST-SDSIFSSVEKHYIDVHDGVHSTAI---NLPGFAFH 236
++FF E L++ L G D + K Y ++ G A LP +F
Sbjct: 136 LLDFFAE---LTIYTSSACLIGKKFRDQLDGRFAKLYHELERGTDPLAYVDPYLPIESFR 192
Query: 237 KALKARKMLVKILQKVVDERKAMKKNGEQTAKRGMIDLMMEIEDESG-KKLQDEXXXXXX 295
+ +AR LV ++ +++ R A + R M+D+++ ++ E+G + +
Sbjct: 193 RRDEARNGLVALVADIMNGRIANPPT--DKSDRDMLDVLIAVKAETGTPRFSADEITGMF 250
Query: 296 XXXXXGAHDGPTHTIMWATIYLYGHPXXXXXXXXXXXXXXXTRPSSQKGLSLQEIKQMEY 355
H + T W I L H + +S ++Q+
Sbjct: 251 ISMMFAGHHTSSGTASWTLIELMRHRDAYAAVIDELDELY----GDGRSVSFHALRQIPQ 306
Query: 356 LSKVIDETLRLMNLPFLDFREAKTDANIKGQ 386
L V+ ETLRL + R AK + ++G
Sbjct: 307 LENVLKETLRLHPPLIILMRVAKGEFEVQGH 337
>pdb|1X8V|A Chain A, Estriol-Bound And Ligand-Free Structures Of Sterol
14alpha- Demethylase (Cyp51)
pdb|2BZ9|A Chain A, Ligand-Free Structure Of Sterol 14alpha-Demethylase From
Mycobacterium Tuberculosis In P2(1) Space Group
pdb|2BZ9|B Chain B, Ligand-Free Structure Of Sterol 14alpha-Demethylase From
Mycobacterium Tuberculosis In P2(1) Space Group
pdb|2CI0|A Chain A, High Throughput Screening And X-Ray Crystallography
Assisted Evaluation Of Small Molecule Scaffolds For
Cyp51 Inhibitors
pdb|2CIB|A Chain A, High Throughput Screening And X-Ray Crystallography
Assisted Evaluation Of Small Molecule Scaffolds For
Cyp51 Inhibitors
pdb|2VKU|A Chain A, 4,4'-Dihydroxybenzophenone Mimics Sterol Substrate In The
Binding Site Of Sterol 14alpha-Demethylase (Cyp51) In
The X-Ray Structure Of The Complex
pdb|2W09|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor Cis-4-
Methyl-N-[(1s)-3-(Methylsulfanyl)-1-(Pyridin-4-
Ylcarbamoyl)propyl]cyclohexanecarboxamide
pdb|2W0B|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor 3-{[(4-
Methylphenyl)sulfonyl]amino}propyl Pyridin-4-Ylcarbamate
Length = 455
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 54/271 (19%), Positives = 105/271 (38%), Gaps = 17/271 (6%)
Query: 121 MTRLAGKNTFVNIAKSEHRRLRKMMTSLMISHEALVMYIGNTEDVAIASLEEWAAASKDE 180
MT + G+ + + R ++M+ + + E + + ED + +W A + +
Sbjct: 79 MTPIFGEGVVFDASPE---RRKEMLHNAALRGEQMKGHAATIEDQVRRMIADWGEAGEID 135
Query: 181 PIEFFCETSKLSLKFIMRILFGST-SDSIFSSVEKHYIDVHDGVHSTAI---NLPGFAFH 236
++FF E L++ L G D + K Y ++ G A LP +F
Sbjct: 136 LLDFFAE---LTIYTSSACLIGKKFRDQLDGRFAKLYHELERGTDPLAYVDPYLPIESFR 192
Query: 237 KALKARKMLVKILQKVVDERKAMKKNGEQTAKRGMIDLMMEIEDESG-KKLQDEXXXXXX 295
+ +AR LV ++ +++ R A + R M+D+++ ++ E+G + +
Sbjct: 193 RRDEARNGLVALVADIMNGRIANPPT--DKSDRDMLDVLIAVKAETGTPRFSADEITGMF 250
Query: 296 XXXXXGAHDGPTHTIMWATIYLYGHPXXXXXXXXXXXXXXXTRPSSQKGLSLQEIKQMEY 355
H + T W I L H + +S ++Q+
Sbjct: 251 ISMMFAGHHTSSGTASWTLIELMRHRDAYAAVIDELDELY----GDGRSVSFHALRQIPQ 306
Query: 356 LSKVIDETLRLMNLPFLDFREAKTDANIKGQ 386
L V+ ETLRL + R AK + ++G
Sbjct: 307 LENVLKETLRLHPPLIILMRVAKGEFEVQGH 337
>pdb|4DU2|B Chain B, Cytochrome P450 Bm3h-B7 Mri Sensor Bound To Dopamine
pdb|4DU2|A Chain A, Cytochrome P450 Bm3h-B7 Mri Sensor Bound To Dopamine
Length = 470
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 53/254 (20%), Positives = 105/254 (41%), Gaps = 21/254 (8%)
Query: 124 LAGKNTFVNIAKSEHRRLRKMMTSLMISHEALVMYIGNTEDVAIASLEEWAAASKDEPIE 183
LAG F + ++ + + S +A+ Y D+A+ +++W + DE IE
Sbjct: 82 LAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADEHIE 141
Query: 184 FFCETSKLSLKFIMRILFGSTSDSIFSSVEKHYIDVHDGVHSTAINL--------PGFAF 235
+ ++L+L I F +S + +I A+N P +
Sbjct: 142 VPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNKLRRANPDDPAYDE 201
Query: 236 HKA--LKARKMLVKILQKVVDERKAMKKNGEQTAKRGMIDLMMEIED-ESGKKLQDEXXX 292
+K + K++ ++ K++ +RKA +GEQ+ ++ M+ +D E+G+ L DE
Sbjct: 202 NKRQFQEDIKVMNDLVDKIIADRKA---SGEQS--DDLLTHMLNGKDPETGEPLDDENIR 256
Query: 293 XXXXXXXXGAHDGPTHTIMWATIYLYGHPXXXXXXXXXXXXXXXTRPSSQKGLSLQEIKQ 352
H+ + + +A +L +P S K ++KQ
Sbjct: 257 YQIITFLAAGHEATSGLLSFALYFLVKNPHELQKAAEEAARVLVDPVPSHK-----QVKQ 311
Query: 353 MEYLSKVIDETLRL 366
++Y+ V++E LRL
Sbjct: 312 LKYVGMVLNEALRL 325
>pdb|2W0A|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor
N-[(1s)-2-Methyl-1-(Pyridin-4-Ylcarbamoyl)propyl]
Cyclohexanecarboxamide
Length = 455
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 51/252 (20%), Positives = 98/252 (38%), Gaps = 14/252 (5%)
Query: 140 RLRKMMTSLMISHEALVMYIGNTEDVAIASLEEWAAASKDEPIEFFCETSKLSLKFIMRI 199
R ++M+ + + E + + ED + +W A + + ++FF E L++
Sbjct: 95 RRKEMLHNAALRGEQMKGHAATIEDQVRRMIADWGEAGEIDLLDFFAE---LTIYTSSAC 151
Query: 200 LFGST-SDSIFSSVEKHYIDVHDGVHSTAI---NLPGFAFHKALKARKMLVKILQKVVDE 255
L G D + K Y ++ G A LP +F + +AR LV ++ +++
Sbjct: 152 LIGKKFRDQLDGRFAKLYHELERGTDPLAYVDPYLPIESFRRRDEARNGLVALVADIMNG 211
Query: 256 RKAMKKNGEQTAKRGMIDLMMEIEDESG-KKLQDEXXXXXXXXXXXGAHDGPTHTIMWAT 314
R A + R M+D+++ ++ E+G + + H + T W
Sbjct: 212 RIANPPT--DKSDRDMLDVLIAVKAETGTPRFSADEITGMFISMMFAGHHTSSGTASWTL 269
Query: 315 IYLYGHPXXXXXXXXXXXXXXXTRPSSQKGLSLQEIKQMEYLSKVIDETLRLMNLPFLDF 374
I L H + +S ++Q+ L V+ ETLRL +
Sbjct: 270 IELMRHRDAYAAVIDELDELY----GDGRSVSFHALRQIPQLENVLKETLRLHPPLIILM 325
Query: 375 REAKTDANIKGQ 386
R AK + ++G
Sbjct: 326 RVAKGEFEVQGH 337
>pdb|1U13|A Chain A, Crystal Structure Analysis Of The C37lC151TC442A-Triple
Mutant Of Cyp51 From Mycobacterium Tuberculosis
Length = 455
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 54/271 (19%), Positives = 105/271 (38%), Gaps = 17/271 (6%)
Query: 121 MTRLAGKNTFVNIAKSEHRRLRKMMTSLMISHEALVMYIGNTEDVAIASLEEWAAASKDE 180
MT + G+ + + R ++M+ + + E + + ED + +W A + +
Sbjct: 79 MTPIFGEGVVFDASPE---RRKEMLHNAALRGEQMKGHAATIEDQVRRMIADWGEAGEID 135
Query: 181 PIEFFCETSKLSLKFIMRILFGST-SDSIFSSVEKHYIDVHDGVHSTAI---NLPGFAFH 236
++FF E L++ L G D + K Y ++ G A LP +F
Sbjct: 136 LLDFFAE---LTIYTSSATLIGKKFRDQLDGRFAKLYHELERGTDPLAYVDPYLPIESFR 192
Query: 237 KALKARKMLVKILQKVVDERKAMKKNGEQTAKRGMIDLMMEIEDESG-KKLQDEXXXXXX 295
+ +AR LV ++ +++ R A + R M+D+++ ++ E+G + +
Sbjct: 193 RRDEARNGLVALVADIMNGRIANPPT--DKSDRDMLDVLIAVKAETGTPRFSADEITGMF 250
Query: 296 XXXXXGAHDGPTHTIMWATIYLYGHPXXXXXXXXXXXXXXXTRPSSQKGLSLQEIKQMEY 355
H + T W I L H + +S ++Q+
Sbjct: 251 ISMMFAGHHTSSGTASWTLIELMRHRDAYAAVIDELDELY----GDGRSVSFHALRQIPQ 306
Query: 356 LSKVIDETLRLMNLPFLDFREAKTDANIKGQ 386
L V+ ETLRL + R AK + ++G
Sbjct: 307 LENVLKETLRLHPPLIILMRVAKGEFEVQGH 337
>pdb|3QI8|B Chain B, Evolved Variant Of Cytochrome P450 (Bm3, Cyp102a1)
pdb|3QI8|A Chain A, Evolved Variant Of Cytochrome P450 (Bm3, Cyp102a1)
Length = 472
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 47/228 (20%), Positives = 100/228 (43%), Gaps = 21/228 (9%)
Query: 150 ISHEALVMYIGNTEDVAIASLEEWAAASKDEPIEFFCETSKLSLKFIMRILFGSTSDSIF 209
+S +A+ Y D+A+ +++W + DE IE + ++L+L I F +S +
Sbjct: 108 LSQQAMKGYHAMMVDIAVQLVQKWERLNSDEHIEVPEDMTRLTLDTIGLCGFNYRINSFY 167
Query: 210 SSVEKHYI--------DVHDGVHSTAINLPGFAFHKA--LKARKMLVKILQKVVDERKAM 259
+I +V + + + P + +K + K++ ++ K++ +RKA
Sbjct: 168 RDQPHPFITSMVRALDEVMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKIIADRKA- 226
Query: 260 KKNGEQTAKRGMIDLMMEIED-ESGKKLQDEXXXXXXXXXXXGAHDGPTHTIMWATIYLY 318
+GEQ+ ++ M+ +D E+G+ L DE H+ + + +A +L
Sbjct: 227 --SGEQS--DDLLTHMLHGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLTFALYFLV 282
Query: 319 GHPXXXXXXXXXXXXXXXTRPSSQKGLSLQEIKQMEYLSKVIDETLRL 366
+P R S +++KQ++Y+ V++E LR+
Sbjct: 283 KNP-----HVLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRI 325
>pdb|4DUB|A Chain A, Cytochrome P450 Bm3h-9d7 Mri Sensor Bound To Dopamine
pdb|4DUB|B Chain B, Cytochrome P450 Bm3h-9d7 Mri Sensor Bound To Dopamine
Length = 472
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/228 (20%), Positives = 97/228 (42%), Gaps = 21/228 (9%)
Query: 150 ISHEALVMYIGNTEDVAIASLEEWAAASKDEPIEFFCETSKLSLKFIMRILFGSTSDSIF 209
S +A+ Y D+A+ +++W + DE IE + ++L+L I F +S +
Sbjct: 108 FSQQAMKGYHAMMVDIAVQLVQKWERLNADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFY 167
Query: 210 SSVEKHYI--------DVHDGVHSTAINLPGFAFHKA--LKARKMLVKILQKVVDERKAM 259
+I + + + + P + +K + K++ ++ K++ +RKA
Sbjct: 168 RDQPHPFITSMVRALDEAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKIIADRKA- 226
Query: 260 KKNGEQTAKRGMIDLMMEIED-ESGKKLQDEXXXXXXXXXXXGAHDGPTHTIMWATIYLY 318
+GEQ+ ++ M+ +D E+G+ L DE H+ + + +A +L
Sbjct: 227 --SGEQS--DDLLTHMLNGKDPETGEPLDDENIRYQIITFLAAGHEATSGLLSFALYFLV 282
Query: 319 GHPXXXXXXXXXXXXXXXTRPSSQKGLSLQEIKQMEYLSKVIDETLRL 366
+P S K ++KQ++Y+ V++E LRL
Sbjct: 283 KNPHVLQKAAEEAARVLVDPVPSYK-----QVKQLKYVGMVLNEALRL 325
>pdb|4DUA|A Chain A, Cytochrome P450 Bm3h-9d7 Mri Sensor, No Ligand
pdb|4DUA|B Chain B, Cytochrome P450 Bm3h-9d7 Mri Sensor, No Ligand
Length = 471
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/228 (20%), Positives = 97/228 (42%), Gaps = 21/228 (9%)
Query: 150 ISHEALVMYIGNTEDVAIASLEEWAAASKDEPIEFFCETSKLSLKFIMRILFGSTSDSIF 209
S +A+ Y D+A+ +++W + DE IE + ++L+L I F +S +
Sbjct: 107 FSQQAMKGYHAMMVDIAVQLVQKWERLNADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFY 166
Query: 210 SSVEKHYI--------DVHDGVHSTAINLPGFAFHKA--LKARKMLVKILQKVVDERKAM 259
+I + + + + P + +K + K++ ++ K++ +RKA
Sbjct: 167 RDQPHPFITSMVRALDEAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKIIADRKA- 225
Query: 260 KKNGEQTAKRGMIDLMMEIED-ESGKKLQDEXXXXXXXXXXXGAHDGPTHTIMWATIYLY 318
+GEQ+ ++ M+ +D E+G+ L DE H+ + + +A +L
Sbjct: 226 --SGEQS--DDLLTHMLNGKDPETGEPLDDENIRYQIITFLAAGHEATSGLLSFALYFLV 281
Query: 319 GHPXXXXXXXXXXXXXXXTRPSSQKGLSLQEIKQMEYLSKVIDETLRL 366
+P S K ++KQ++Y+ V++E LRL
Sbjct: 282 KNPHVLQKAAEEAARVLVDPVPSYK-----QVKQLKYVGMVLNEALRL 324
>pdb|4DTW|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Serotonin
pdb|4DTW|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Serotonin
pdb|4DTY|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor, No Ligand
pdb|4DTY|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor, No Ligand
pdb|4DTZ|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Dopamine
pdb|4DTZ|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Dopamine
Length = 469
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/228 (21%), Positives = 97/228 (42%), Gaps = 21/228 (9%)
Query: 150 ISHEALVMYIGNTEDVAIASLEEWAAASKDEPIEFFCETSKLSLKFIMRILFGSTSDSIF 209
S +A+ Y D+A+ +++W + DE IE + ++L+L I F +S +
Sbjct: 107 FSQQAMKGYHAMMVDIAVQLVQKWERLNADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFY 166
Query: 210 SSVEKHYIDVHDGVHSTAINL--------PGFAFHKA--LKARKMLVKILQKVVDERKAM 259
+I A+N P + +K + K++ ++ K++ +RKA
Sbjct: 167 RDQPHPFITSMVRALDEAMNKLRRANPDDPAYDENKRQFQEDIKVMNDLVDKIIADRKA- 225
Query: 260 KKNGEQTAKRGMIDLMMEIED-ESGKKLQDEXXXXXXXXXXXGAHDGPTHTIMWATIYLY 318
+GEQ+ ++ M+ +D E+G+ L DE H+ + + +A +L
Sbjct: 226 --SGEQS--DDLLTHMLNGKDPETGEPLDDENIRYQIITFLAAGHEATSGLLSFALYFLV 281
Query: 319 GHPXXXXXXXXXXXXXXXTRPSSQKGLSLQEIKQMEYLSKVIDETLRL 366
+P R S +++KQ++Y+ V++E LRL
Sbjct: 282 KNP-----HELQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRL 324
>pdb|3CBD|A Chain A, Directed Evolution Of Cytochrome P450 Bm3, To Octane
Monoxygenase 139-3
pdb|3CBD|B Chain B, Directed Evolution Of Cytochrome P450 Bm3, To Octane
Monoxygenase 139-3
Length = 455
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/227 (21%), Positives = 99/227 (43%), Gaps = 21/227 (9%)
Query: 151 SHEALVMYIGNTEDVAIASLEEWAAASKDEPIEFFCETSKLSLKFIMRILFGSTSDSIFS 210
S +A+ Y D+A+ +++W + DE IE + ++L+L I F +S +
Sbjct: 108 SQQAMKGYHAMMVDIAVQLVQKWERLNADEYIEVPEDMTRLTLDTIGLCGFNYRFNSFYR 167
Query: 211 SVEKHYI--------DVHDGVHSTAINLPGFAFHKAL--KARKMLVKILQKVVDERKAMK 260
+I +V + + + P + +K + K++ ++ K++ +RKA
Sbjct: 168 DQPHPFIISMIRALDEVMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKIIADRKA-- 225
Query: 261 KNGEQTAKRGMIDLMMEIED-ESGKKLQDEXXXXXXXXXXXGAHDGPTHTIMWATIYLYG 319
+GEQ+ ++ M+ +D E+G+ L D H+ + + +A +L
Sbjct: 226 -SGEQS--DDLLTQMLNGKDPETGEPLDDGNISYQIITFLIAGHETTSGLLSFALYFLVK 282
Query: 320 HPXXXXXXXXXXXXXXXTRPSSQKGLSLQEIKQMEYLSKVIDETLRL 366
+P TR S +++KQ++Y+ V++E LRL
Sbjct: 283 NPHVLQKVAEEA-----TRVLVDPVPSYKQVKQLKYVGMVLNEALRL 324
>pdb|1FAH|A Chain A, Structure Of Cytochrome P450
pdb|1FAH|B Chain B, Structure Of Cytochrome P450
Length = 471
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/228 (20%), Positives = 97/228 (42%), Gaps = 21/228 (9%)
Query: 150 ISHEALVMYIGNTEDVAIASLEEWAAASKDEPIEFFCETSKLSLKFIMRILFGSTSDSIF 209
S +A+ Y D+A+ +++W + DE IE + ++L+L I F +S +
Sbjct: 107 FSQQAMKGYHAMMVDIAVQLVQKWERLNADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFY 166
Query: 210 SSVEKHYI--------DVHDGVHSTAINLPGFAFHKA--LKARKMLVKILQKVVDERKAM 259
+I + + + + P + +K + K++ ++ K++ +RKA
Sbjct: 167 RDQPHPFITSMVRALDEAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKIIADRKA- 225
Query: 260 KKNGEQTAKRGMIDLMMEIED-ESGKKLQDEXXXXXXXXXXXGAHDGPTHTIMWATIYLY 318
+GEQ+ ++ M+ +D E+G+ L DE H+ + + +A +L
Sbjct: 226 --SGEQS--DDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHEATSGLLSFALYFLV 281
Query: 319 GHPXXXXXXXXXXXXXXXTRPSSQKGLSLQEIKQMEYLSKVIDETLRL 366
+P S K ++KQ++Y+ V++E LRL
Sbjct: 282 KNPHVLQKAAEEAARVLVDPVPSYK-----QVKQLKYVGMVLNEALRL 324
>pdb|1YQO|A Chain A, T268a Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1YQO|B Chain B, T268a Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/228 (20%), Positives = 97/228 (42%), Gaps = 21/228 (9%)
Query: 150 ISHEALVMYIGNTEDVAIASLEEWAAASKDEPIEFFCETSKLSLKFIMRILFGSTSDSIF 209
S +A+ Y D+A+ +++W + DE IE + ++L+L I F +S +
Sbjct: 107 FSQQAMKGYHAMMVDIAVQLVQKWERLNADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFY 166
Query: 210 SSVEKHYI--------DVHDGVHSTAINLPGFAFHKA--LKARKMLVKILQKVVDERKAM 259
+I + + + + P + +K + K++ ++ K++ +RKA
Sbjct: 167 RDQPHPFITSMVRALDEAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKIIADRKA- 225
Query: 260 KKNGEQTAKRGMIDLMMEIED-ESGKKLQDEXXXXXXXXXXXGAHDGPTHTIMWATIYLY 318
+GEQ+ ++ M+ +D E+G+ L DE H+ + + +A +L
Sbjct: 226 --SGEQS--DDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHEATSGLLSFALYFLV 281
Query: 319 GHPXXXXXXXXXXXXXXXTRPSSQKGLSLQEIKQMEYLSKVIDETLRL 366
+P S K ++KQ++Y+ V++E LRL
Sbjct: 282 KNPHVLQKAAEEAARVLVDPVPSYK-----QVKQLKYVGMVLNEALRL 324
>pdb|1YQP|A Chain A, T268n Mutant Cytochrome Domain Of Flavocytochrome P450 Bm3
pdb|1YQP|B Chain B, T268n Mutant Cytochrome Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/228 (20%), Positives = 97/228 (42%), Gaps = 21/228 (9%)
Query: 150 ISHEALVMYIGNTEDVAIASLEEWAAASKDEPIEFFCETSKLSLKFIMRILFGSTSDSIF 209
S +A+ Y D+A+ +++W + DE IE + ++L+L I F +S +
Sbjct: 107 FSQQAMKGYHAMMVDIAVQLVQKWERLNADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFY 166
Query: 210 SSVEKHYI--------DVHDGVHSTAINLPGFAFHKA--LKARKMLVKILQKVVDERKAM 259
+I + + + + P + +K + K++ ++ K++ +RKA
Sbjct: 167 RDQPHPFITSMVRALDEAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKIIADRKA- 225
Query: 260 KKNGEQTAKRGMIDLMMEIED-ESGKKLQDEXXXXXXXXXXXGAHDGPTHTIMWATIYLY 318
+GEQ+ ++ M+ +D E+G+ L DE H+ + + +A +L
Sbjct: 226 --SGEQS--DDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHENTSGLLSFALYFLV 281
Query: 319 GHPXXXXXXXXXXXXXXXTRPSSQKGLSLQEIKQMEYLSKVIDETLRL 366
+P S K ++KQ++Y+ V++E LRL
Sbjct: 282 KNPHVLQKAAEEAARVLVDPVPSYK-----QVKQLKYVGMVLNEALRL 324
>pdb|3DGI|A Chain A, Crystal Structure Of F87aT268A MUTANT OF CYP BM3
pdb|3DGI|B Chain B, Crystal Structure Of F87aT268A MUTANT OF CYP BM3
Length = 461
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/228 (20%), Positives = 97/228 (42%), Gaps = 21/228 (9%)
Query: 150 ISHEALVMYIGNTEDVAIASLEEWAAASKDEPIEFFCETSKLSLKFIMRILFGSTSDSIF 209
S +A+ Y D+A+ +++W + DE IE + ++L+L I F +S +
Sbjct: 107 FSQQAMKGYHAMMVDIAVQLVQKWERLNADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFY 166
Query: 210 SSVEKHYI--------DVHDGVHSTAINLPGFAFHKA--LKARKMLVKILQKVVDERKAM 259
+I + + + + P + +K + K++ ++ K++ +RKA
Sbjct: 167 RDQPHPFITSMVRALDEAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKIIADRKA- 225
Query: 260 KKNGEQTAKRGMIDLMMEIED-ESGKKLQDEXXXXXXXXXXXGAHDGPTHTIMWATIYLY 318
+GEQ+ ++ M+ +D E+G+ L DE H+ + + +A +L
Sbjct: 226 --SGEQS--DDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHEATSGLLSFALYFLV 281
Query: 319 GHPXXXXXXXXXXXXXXXTRPSSQKGLSLQEIKQMEYLSKVIDETLRL 366
+P S K ++KQ++Y+ V++E LRL
Sbjct: 282 KNPHVLQKAAEEAARVLVDPVPSYK-----QVKQLKYVGMVLNEALRL 324
>pdb|4DUF|A Chain A, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|B Chain B, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|C Chain C, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|D Chain D, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
Length = 471
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/227 (20%), Positives = 97/227 (42%), Gaps = 21/227 (9%)
Query: 151 SHEALVMYIGNTEDVAIASLEEWAAASKDEPIEFFCETSKLSLKFIMRILFGSTSDSIFS 210
S +A+ Y D+A+ +++W + DE IE + ++L+L I F +S +
Sbjct: 108 SQQAMKGYHAMMVDIAVQLVQKWERLNADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYR 167
Query: 211 SVEKHYI--------DVHDGVHSTAINLPGFAFHKA--LKARKMLVKILQKVVDERKAMK 260
+I + + + + P + +K + K++ ++ K++ +RKA
Sbjct: 168 DQPHPFITSMVRALDEAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKIIADRKA-- 225
Query: 261 KNGEQTAKRGMIDLMMEIED-ESGKKLQDEXXXXXXXXXXXGAHDGPTHTIMWATIYLYG 319
+GEQ+ ++ M+ +D E+G+ L DE H+ + + +A +L
Sbjct: 226 -SGEQS--DDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHESTSGLLSFALYFLVK 282
Query: 320 HPXXXXXXXXXXXXXXXTRPSSQKGLSLQEIKQMEYLSKVIDETLRL 366
+P S K ++KQ++Y+ V++E LRL
Sbjct: 283 NPHVLQKAAEEAARVLVDPVPSYK-----QVKQLKYVGMVLNEALRL 324
>pdb|4DUD|A Chain A, Cytochrome P450 Bm3h-2g9c6 Mri Sensor, No Ligand
pdb|4DUD|B Chain B, Cytochrome P450 Bm3h-2g9c6 Mri Sensor, No Ligand
pdb|4DUE|A Chain A, Cytochrome P450 Bm3h-2g9c6 Mri Sensor Bound To Serotonin
pdb|4DUE|B Chain B, Cytochrome P450 Bm3h-2g9c6 Mri Sensor Bound To Serotonin
Length = 471
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/227 (20%), Positives = 97/227 (42%), Gaps = 21/227 (9%)
Query: 151 SHEALVMYIGNTEDVAIASLEEWAAASKDEPIEFFCETSKLSLKFIMRILFGSTSDSIFS 210
S +A+ Y D+A+ +++W + DE IE + ++L+L I F +S +
Sbjct: 108 SQQAMKGYHAMMVDIAVQLVQKWERLNADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYR 167
Query: 211 SVEKHYI--------DVHDGVHSTAINLPGFAFHKA--LKARKMLVKILQKVVDERKAMK 260
+I + + + + P + +K + K++ ++ K++ +RKA
Sbjct: 168 DQPHPFITSMVRALDEAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKIIADRKA-- 225
Query: 261 KNGEQTAKRGMIDLMMEIED-ESGKKLQDEXXXXXXXXXXXGAHDGPTHTIMWATIYLYG 319
+GEQ+ ++ M+ +D E+G+ L DE H+ + + +A +L
Sbjct: 226 -SGEQS--DDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHESTSGLLSFALYFLVK 282
Query: 320 HPXXXXXXXXXXXXXXXTRPSSQKGLSLQEIKQMEYLSKVIDETLRL 366
+P S K ++KQ++Y+ V++E LRL
Sbjct: 283 NPHVLQKAAEEAARVLVDPVPSYK-----QVKQLKYVGMVLNEALRL 324
>pdb|4DUC|A Chain A, Cytochrome P450 Bm3h-2g9 Mri Sensor, No Ligand
pdb|4DUC|B Chain B, Cytochrome P450 Bm3h-2g9 Mri Sensor, No Ligand
Length = 472
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/227 (20%), Positives = 97/227 (42%), Gaps = 21/227 (9%)
Query: 151 SHEALVMYIGNTEDVAIASLEEWAAASKDEPIEFFCETSKLSLKFIMRILFGSTSDSIFS 210
S +A+ Y D+A+ +++W + DE IE + ++L+L I F +S +
Sbjct: 109 SQQAMKGYHAMMVDIAVQLVQKWERLNADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYR 168
Query: 211 SVEKHYI--------DVHDGVHSTAINLPGFAFHKA--LKARKMLVKILQKVVDERKAMK 260
+I + + + + P + +K + K++ ++ K++ +RKA
Sbjct: 169 DQPHPFITSMVRALDEAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKIIADRKA-- 226
Query: 261 KNGEQTAKRGMIDLMMEIED-ESGKKLQDEXXXXXXXXXXXGAHDGPTHTIMWATIYLYG 319
+GEQ+ ++ M+ +D E+G+ L DE H+ + + +A +L
Sbjct: 227 -SGEQS--DDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHESTSGLLSFALYFLVK 283
Query: 320 HPXXXXXXXXXXXXXXXTRPSSQKGLSLQEIKQMEYLSKVIDETLRL 366
+P S K ++KQ++Y+ V++E LRL
Sbjct: 284 NPHVLQKAAEEAARVLVDPVPSYK-----QVKQLKYVGMVLNEALRL 325
>pdb|2UWH|A Chain A, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|B Chain B, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|C Chain C, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|D Chain D, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|E Chain E, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|F Chain F, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
Length = 458
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/228 (20%), Positives = 97/228 (42%), Gaps = 21/228 (9%)
Query: 150 ISHEALVMYIGNTEDVAIASLEEWAAASKDEPIEFFCETSKLSLKFIMRILFGSTSDSIF 209
S +A+ Y D+A+ +++W + DE IE + ++L+L I F +S +
Sbjct: 107 FSQQAMKGYHAMMVDIAVQLVQKWERLNADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFY 166
Query: 210 SSVEKHYI--------DVHDGVHSTAINLPGFAFHKA--LKARKMLVKILQKVVDERKAM 259
+I + + + + P + +K + K++ ++ K++ +RKA
Sbjct: 167 RDQPHPFITSMVRALDEAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKIIADRKA- 225
Query: 260 KKNGEQTAKRGMIDLMMEIED-ESGKKLQDEXXXXXXXXXXXGAHDGPTHTIMWATIYLY 318
+GEQ+ ++ M+ +D E+G+ L DE H+ + + +A +L
Sbjct: 226 --SGEQS--DDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLV 281
Query: 319 GHPXXXXXXXXXXXXXXXTRPSSQKGLSLQEIKQMEYLSKVIDETLRL 366
+P S K ++KQ++Y+ V++E LRL
Sbjct: 282 KNPHVLQKAAEEAARVLVDPVPSYK-----QVKQLKYVGMVLNEALRL 324
>pdb|1BVY|A Chain A, Complex Of The Heme And Fmn-Binding Domains Of The
Cytochrome P450(Bm-3)
pdb|1BVY|B Chain B, Complex Of The Heme And Fmn-Binding Domains Of The
Cytochrome P450(Bm-3)
Length = 458
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/228 (20%), Positives = 97/228 (42%), Gaps = 21/228 (9%)
Query: 150 ISHEALVMYIGNTEDVAIASLEEWAAASKDEPIEFFCETSKLSLKFIMRILFGSTSDSIF 209
S +A+ Y D+A+ +++W + DE IE + ++L+L I F +S +
Sbjct: 107 FSQQAMKGYHAMMVDIAVQLVQKWERLNADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFY 166
Query: 210 SSVEKHYI--------DVHDGVHSTAINLPGFAFHKA--LKARKMLVKILQKVVDERKAM 259
+I + + + + P + +K + K++ ++ K++ +RKA
Sbjct: 167 RDQPHPFITSMVRALDEAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKIIADRKA- 225
Query: 260 KKNGEQTAKRGMIDLMMEIED-ESGKKLQDEXXXXXXXXXXXGAHDGPTHTIMWATIYLY 318
+GEQ+ ++ M+ +D E+G+ L DE H+ + + +A +L
Sbjct: 226 --SGEQS--DDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLV 281
Query: 319 GHPXXXXXXXXXXXXXXXTRPSSQKGLSLQEIKQMEYLSKVIDETLRL 366
+P S K ++KQ++Y+ V++E LRL
Sbjct: 282 KNPHVLQKAAEEAARVLVDPVPSYK-----QVKQLKYVGMVLNEALRL 324
>pdb|2IJ2|A Chain A, Atomic Structure Of The Heme Domain Of Flavocytochrome
P450- Bm3
pdb|2IJ2|B Chain B, Atomic Structure Of The Heme Domain Of Flavocytochrome
P450- Bm3
Length = 470
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/228 (20%), Positives = 97/228 (42%), Gaps = 21/228 (9%)
Query: 150 ISHEALVMYIGNTEDVAIASLEEWAAASKDEPIEFFCETSKLSLKFIMRILFGSTSDSIF 209
S +A+ Y D+A+ +++W + DE IE + ++L+L I F +S +
Sbjct: 107 FSQQAMKGYHAMMVDIAVQLVQKWERLNADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFY 166
Query: 210 SSVEKHYI--------DVHDGVHSTAINLPGFAFHKA--LKARKMLVKILQKVVDERKAM 259
+I + + + + P + +K + K++ ++ K++ +RKA
Sbjct: 167 RDQPHPFITSMVRALDEAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKIIADRKA- 225
Query: 260 KKNGEQTAKRGMIDLMMEIED-ESGKKLQDEXXXXXXXXXXXGAHDGPTHTIMWATIYLY 318
+GEQ+ ++ M+ +D E+G+ L DE H+ + + +A +L
Sbjct: 226 --SGEQS--DDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLV 281
Query: 319 GHPXXXXXXXXXXXXXXXTRPSSQKGLSLQEIKQMEYLSKVIDETLRL 366
+P S K ++KQ++Y+ V++E LRL
Sbjct: 282 KNPHVLQKAAEEAARVLVDPVPSYK-----QVKQLKYVGMVLNEALRL 324
>pdb|3BEN|A Chain A, Structure Of N-(12-Imidazolyl-Dodecanoyl)-L-Leucine
Inhibitor Bound To The Heme Domain Of Cytochrome
P450-Bm3
pdb|3BEN|B Chain B, Structure Of N-(12-Imidazolyl-Dodecanoyl)-L-Leucine
Inhibitor Bound To The Heme Domain Of Cytochrome
P450-Bm3
Length = 470
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/228 (20%), Positives = 97/228 (42%), Gaps = 21/228 (9%)
Query: 150 ISHEALVMYIGNTEDVAIASLEEWAAASKDEPIEFFCETSKLSLKFIMRILFGSTSDSIF 209
S +A+ Y D+A+ +++W + DE IE + ++L+L I F +S +
Sbjct: 108 FSQQAMKGYHAMMVDIAVQLVQKWERLNADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFY 167
Query: 210 SSVEKHYI--------DVHDGVHSTAINLPGFAFHKA--LKARKMLVKILQKVVDERKAM 259
+I + + + + P + +K + K++ ++ K++ +RKA
Sbjct: 168 RDQPHPFITSMVRALDEAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKIIADRKA- 226
Query: 260 KKNGEQTAKRGMIDLMMEIED-ESGKKLQDEXXXXXXXXXXXGAHDGPTHTIMWATIYLY 318
+GEQ+ ++ M+ +D E+G+ L DE H+ + + +A +L
Sbjct: 227 --SGEQS--DDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLV 282
Query: 319 GHPXXXXXXXXXXXXXXXTRPSSQKGLSLQEIKQMEYLSKVIDETLRL 366
+P S K ++KQ++Y+ V++E LRL
Sbjct: 283 KNPHVLQKAAEEAARVLVDPVPSYK-----QVKQLKYVGMVLNEALRL 325
>pdb|2HPD|A Chain A, Crystal Structure Of Hemoprotein Domain Of P450bm-3, A
Prototype For Microsomal P450's
pdb|2HPD|B Chain B, Crystal Structure Of Hemoprotein Domain Of P450bm-3, A
Prototype For Microsomal P450's
pdb|1FAG|A Chain A, Structure Of Cytochrome P450
pdb|1FAG|B Chain B, Structure Of Cytochrome P450
pdb|1FAG|C Chain C, Structure Of Cytochrome P450
pdb|1FAG|D Chain D, Structure Of Cytochrome P450
Length = 471
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/228 (20%), Positives = 97/228 (42%), Gaps = 21/228 (9%)
Query: 150 ISHEALVMYIGNTEDVAIASLEEWAAASKDEPIEFFCETSKLSLKFIMRILFGSTSDSIF 209
S +A+ Y D+A+ +++W + DE IE + ++L+L I F +S +
Sbjct: 107 FSQQAMKGYHAMMVDIAVQLVQKWERLNADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFY 166
Query: 210 SSVEKHYI--------DVHDGVHSTAINLPGFAFHKA--LKARKMLVKILQKVVDERKAM 259
+I + + + + P + +K + K++ ++ K++ +RKA
Sbjct: 167 RDQPHPFITSMVRALDEAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKIIADRKA- 225
Query: 260 KKNGEQTAKRGMIDLMMEIED-ESGKKLQDEXXXXXXXXXXXGAHDGPTHTIMWATIYLY 318
+GEQ+ ++ M+ +D E+G+ L DE H+ + + +A +L
Sbjct: 226 --SGEQS--DDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLV 281
Query: 319 GHPXXXXXXXXXXXXXXXTRPSSQKGLSLQEIKQMEYLSKVIDETLRL 366
+P S K ++KQ++Y+ V++E LRL
Sbjct: 282 KNPHVLQKAAEEAARVLVDPVPSYK-----QVKQLKYVGMVLNEALRL 324
>pdb|3KX5|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX5|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/227 (20%), Positives = 97/227 (42%), Gaps = 21/227 (9%)
Query: 151 SHEALVMYIGNTEDVAIASLEEWAAASKDEPIEFFCETSKLSLKFIMRILFGSTSDSIFS 210
S +A+ Y D+A+ +++W + DE IE + ++L+L I F +S +
Sbjct: 108 SQQAMKGYHAMMVDIAVQLVQKWERLNADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYR 167
Query: 211 SVEKHYI--------DVHDGVHSTAINLPGFAFHKA--LKARKMLVKILQKVVDERKAMK 260
+I + + + + P + +K + K++ ++ K++ +RKA
Sbjct: 168 DQPHPFITSMVRALDEAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKIIADRKA-- 225
Query: 261 KNGEQTAKRGMIDLMMEIED-ESGKKLQDEXXXXXXXXXXXGAHDGPTHTIMWATIYLYG 319
+GEQ+ ++ M+ +D E+G+ L DE H+ + + +A +L
Sbjct: 226 -SGEQS--DDLLTHMLNGKDPETGEPLDDENIRYQIITELIAGHETTSGLLSFALYFLVK 282
Query: 320 HPXXXXXXXXXXXXXXXTRPSSQKGLSLQEIKQMEYLSKVIDETLRL 366
+P S K ++KQ++Y+ V++E LRL
Sbjct: 283 NPHVLQKAAEEAARVLVDPVPSYK-----QVKQLKYVGMVLNEALRL 324
>pdb|1ZO4|A Chain A, Crystal Structure Of A328s Mutant Of The Heme Domain Of
P450bm-3
pdb|1ZO4|B Chain B, Crystal Structure Of A328s Mutant Of The Heme Domain Of
P450bm-3
Length = 473
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/228 (20%), Positives = 97/228 (42%), Gaps = 21/228 (9%)
Query: 150 ISHEALVMYIGNTEDVAIASLEEWAAASKDEPIEFFCETSKLSLKFIMRILFGSTSDSIF 209
S +A+ Y D+A+ +++W + DE IE + ++L+L I F +S +
Sbjct: 110 FSQQAMKGYHAMMVDIAVQLVQKWERLNADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFY 169
Query: 210 SSVEKHYI--------DVHDGVHSTAINLPGFAFHKA--LKARKMLVKILQKVVDERKAM 259
+I + + + + P + +K + K++ ++ K++ +RKA
Sbjct: 170 RDQPHPFITSMVRALDEAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKIIADRKA- 228
Query: 260 KKNGEQTAKRGMIDLMMEIED-ESGKKLQDEXXXXXXXXXXXGAHDGPTHTIMWATIYLY 318
+GEQ+ ++ M+ +D E+G+ L DE H+ + + +A +L
Sbjct: 229 --SGEQS--DDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLV 284
Query: 319 GHPXXXXXXXXXXXXXXXTRPSSQKGLSLQEIKQMEYLSKVIDETLRL 366
+P S K ++KQ++Y+ V++E LRL
Sbjct: 285 KNPHVLQKAAEEAARVLVDPVPSYK-----QVKQLKYVGMVLNEALRL 327
>pdb|1P0X|A Chain A, F393y Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0X|B Chain B, F393y Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/228 (20%), Positives = 97/228 (42%), Gaps = 21/228 (9%)
Query: 150 ISHEALVMYIGNTEDVAIASLEEWAAASKDEPIEFFCETSKLSLKFIMRILFGSTSDSIF 209
S +A+ Y D+A+ +++W + DE IE + ++L+L I F +S +
Sbjct: 107 FSQQAMKGYHAMMVDIAVQLVQKWERLNADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFY 166
Query: 210 SSVEKHYI--------DVHDGVHSTAINLPGFAFHKA--LKARKMLVKILQKVVDERKAM 259
+I + + + + P + +K + K++ ++ K++ +RKA
Sbjct: 167 RDQPHPFITSMVRALDEAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKIIADRKA- 225
Query: 260 KKNGEQTAKRGMIDLMMEIED-ESGKKLQDEXXXXXXXXXXXGAHDGPTHTIMWATIYLY 318
+GEQ+ ++ M+ +D E+G+ L DE H+ + + +A +L
Sbjct: 226 --SGEQS--DDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLV 281
Query: 319 GHPXXXXXXXXXXXXXXXTRPSSQKGLSLQEIKQMEYLSKVIDETLRL 366
+P S K ++KQ++Y+ V++E LRL
Sbjct: 282 KNPHVLQKAAEEAARVLVDPVPSYK-----QVKQLKYVGMVLNEALRL 324
>pdb|3PSX|A Chain A, Crystal Structure Of The Kt2 Mutant Of Cytochrome P450 Bm3
pdb|3PSX|B Chain B, Crystal Structure Of The Kt2 Mutant Of Cytochrome P450 Bm3
Length = 487
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/228 (20%), Positives = 98/228 (42%), Gaps = 21/228 (9%)
Query: 150 ISHEALVMYIGNTEDVAIASLEEWAAASKDEPIEFFCETSKLSLKFIMRILFGSTSDSIF 209
S +A+ Y D+A+ +++W + DE IE + ++L+L I F +S +
Sbjct: 113 FSQQAMKGYHAMMVDIAVQLVQKWERLNADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFY 172
Query: 210 SSVEKHYI--------DVHDGVHSTAINLPGFAFHKA--LKARKMLVKILQKVVDERKAM 259
+I + + + T + P + +K + K++ ++ K++ +RKA
Sbjct: 173 RDQPHPFITSMVRALDEAMNKLQRTNPDDPAYDENKRQFQEDIKVMNDLVDKIIADRKA- 231
Query: 260 KKNGEQTAKRGMIDLMMEIED-ESGKKLQDEXXXXXXXXXXXGAHDGPTHTIMWATIYLY 318
+GEQ+ ++ M+ +D E+G+ L DE H+ + + + +L
Sbjct: 232 --SGEQS--DDLLTHMLHGKDPETGEPLDDENIRYQIVTFLIAGHETTSGLLSFTLYFLV 287
Query: 319 GHPXXXXXXXXXXXXXXXTRPSSQKGLSLQEIKQMEYLSKVIDETLRL 366
+P R S +++KQ++Y+ V++E LRL
Sbjct: 288 KNP-----HVLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRL 330
>pdb|2NNB|A Chain A, The Q403k Mutnat Heme Domain Of Flavocytochrome P450 Bm3
pdb|2NNB|B Chain B, The Q403k Mutnat Heme Domain Of Flavocytochrome P450 Bm3
Length = 471
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/228 (20%), Positives = 97/228 (42%), Gaps = 21/228 (9%)
Query: 150 ISHEALVMYIGNTEDVAIASLEEWAAASKDEPIEFFCETSKLSLKFIMRILFGSTSDSIF 209
S +A+ Y D+A+ +++W + DE IE + ++L+L I F +S +
Sbjct: 107 FSQQAMKGYHAMMVDIAVQLVQKWERLNADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFY 166
Query: 210 SSVEKHYI--------DVHDGVHSTAINLPGFAFHKA--LKARKMLVKILQKVVDERKAM 259
+I + + + + P + +K + K++ ++ K++ +RKA
Sbjct: 167 RDQPHPFITSMVRALDEAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKIIADRKA- 225
Query: 260 KKNGEQTAKRGMIDLMMEIED-ESGKKLQDEXXXXXXXXXXXGAHDGPTHTIMWATIYLY 318
+GEQ+ ++ M+ +D E+G+ L DE H+ + + +A +L
Sbjct: 226 --SGEQS--DDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLV 281
Query: 319 GHPXXXXXXXXXXXXXXXTRPSSQKGLSLQEIKQMEYLSKVIDETLRL 366
+P S K ++KQ++Y+ V++E LRL
Sbjct: 282 KNPHVLQKAAEEAARVLVDPVPSYK-----QVKQLKYVGMVLNEALRL 324
>pdb|1P0V|A Chain A, F393a Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0V|B Chain B, F393a Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/228 (20%), Positives = 97/228 (42%), Gaps = 21/228 (9%)
Query: 150 ISHEALVMYIGNTEDVAIASLEEWAAASKDEPIEFFCETSKLSLKFIMRILFGSTSDSIF 209
S +A+ Y D+A+ +++W + DE IE + ++L+L I F +S +
Sbjct: 107 FSQQAMKGYHAMMVDIAVQLVQKWERLNADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFY 166
Query: 210 SSVEKHYI--------DVHDGVHSTAINLPGFAFHKA--LKARKMLVKILQKVVDERKAM 259
+I + + + + P + +K + K++ ++ K++ +RKA
Sbjct: 167 RDQPHPFITSMVRALDEAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKIIADRKA- 225
Query: 260 KKNGEQTAKRGMIDLMMEIED-ESGKKLQDEXXXXXXXXXXXGAHDGPTHTIMWATIYLY 318
+GEQ+ ++ M+ +D E+G+ L DE H+ + + +A +L
Sbjct: 226 --SGEQS--DDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLV 281
Query: 319 GHPXXXXXXXXXXXXXXXTRPSSQKGLSLQEIKQMEYLSKVIDETLRL 366
+P S K ++KQ++Y+ V++E LRL
Sbjct: 282 KNPHVLQKAAEEAARVLVDPVPSYK-----QVKQLKYVGMVLNEALRL 324
>pdb|2BMH|A Chain A, Modeling Protein-Substrate Interactions In The Heme Domain
Of Cytochrome P450bm-3
pdb|2BMH|B Chain B, Modeling Protein-Substrate Interactions In The Heme Domain
Of Cytochrome P450bm-3
pdb|1BU7|A Chain A, Cryogenic Structure Of Cytochrome P450bm-3 Heme Domain
pdb|1BU7|B Chain B, Cryogenic Structure Of Cytochrome P450bm-3 Heme Domain
pdb|2J1M|A Chain A, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J1M|B Chain B, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J4S|A Chain A, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J4S|B Chain B, P450 Bm3 Heme Domain In Complex With Dmso
Length = 455
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/228 (20%), Positives = 97/228 (42%), Gaps = 21/228 (9%)
Query: 150 ISHEALVMYIGNTEDVAIASLEEWAAASKDEPIEFFCETSKLSLKFIMRILFGSTSDSIF 209
S +A+ Y D+A+ +++W + DE IE + ++L+L I F +S +
Sbjct: 107 FSQQAMKGYHAMMVDIAVQLVQKWERLNADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFY 166
Query: 210 SSVEKHYI--------DVHDGVHSTAINLPGFAFHKA--LKARKMLVKILQKVVDERKAM 259
+I + + + + P + +K + K++ ++ K++ +RKA
Sbjct: 167 RDQPHPFITSMVRALDEAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKIIADRKA- 225
Query: 260 KKNGEQTAKRGMIDLMMEIED-ESGKKLQDEXXXXXXXXXXXGAHDGPTHTIMWATIYLY 318
+GEQ+ ++ M+ +D E+G+ L DE H+ + + +A +L
Sbjct: 226 --SGEQS--DDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLV 281
Query: 319 GHPXXXXXXXXXXXXXXXTRPSSQKGLSLQEIKQMEYLSKVIDETLRL 366
+P S K ++KQ++Y+ V++E LRL
Sbjct: 282 KNPHVLQKAAEEAARVLVDPVPSYK-----QVKQLKYVGMVLNEALRL 324
>pdb|2X7Y|A Chain A, P450 Bm3 F87a In Complex With Dmso
pdb|2X7Y|B Chain B, P450 Bm3 F87a In Complex With Dmso
pdb|2X80|A Chain A, P450 Bm3 F87a In Complex With Dmso
pdb|2X80|B Chain B, P450 Bm3 F87a In Complex With Dmso
Length = 455
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/228 (20%), Positives = 97/228 (42%), Gaps = 21/228 (9%)
Query: 150 ISHEALVMYIGNTEDVAIASLEEWAAASKDEPIEFFCETSKLSLKFIMRILFGSTSDSIF 209
S +A+ Y D+A+ +++W + DE IE + ++L+L I F +S +
Sbjct: 107 FSQQAMKGYHAMMVDIAVQLVQKWERLNADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFY 166
Query: 210 SSVEKHYI--------DVHDGVHSTAINLPGFAFHKA--LKARKMLVKILQKVVDERKAM 259
+I + + + + P + +K + K++ ++ K++ +RKA
Sbjct: 167 RDQPHPFITSMVRALDEAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKIIADRKA- 225
Query: 260 KKNGEQTAKRGMIDLMMEIED-ESGKKLQDEXXXXXXXXXXXGAHDGPTHTIMWATIYLY 318
+GEQ+ ++ M+ +D E+G+ L DE H+ + + +A +L
Sbjct: 226 --SGEQS--DDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLV 281
Query: 319 GHPXXXXXXXXXXXXXXXTRPSSQKGLSLQEIKQMEYLSKVIDETLRL 366
+P S K ++KQ++Y+ V++E LRL
Sbjct: 282 KNPHVLQKAAEEAARVLVDPVPSYK-----QVKQLKYVGMVLNEALRL 324
>pdb|1JME|A Chain A, Crystal Structure Of Phe393his Cytochrome P450 Bm3
pdb|1JME|B Chain B, Crystal Structure Of Phe393his Cytochrome P450 Bm3
Length = 455
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/228 (20%), Positives = 97/228 (42%), Gaps = 21/228 (9%)
Query: 150 ISHEALVMYIGNTEDVAIASLEEWAAASKDEPIEFFCETSKLSLKFIMRILFGSTSDSIF 209
S +A+ Y D+A+ +++W + DE IE + ++L+L I F +S +
Sbjct: 107 FSQQAMKGYHAMMVDIAVQLVQKWERLNADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFY 166
Query: 210 SSVEKHYI--------DVHDGVHSTAINLPGFAFHKA--LKARKMLVKILQKVVDERKAM 259
+I + + + + P + +K + K++ ++ K++ +RKA
Sbjct: 167 RDQPHPFITSMVRALDEAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKIIADRKA- 225
Query: 260 KKNGEQTAKRGMIDLMMEIED-ESGKKLQDEXXXXXXXXXXXGAHDGPTHTIMWATIYLY 318
+GEQ+ ++ M+ +D E+G+ L DE H+ + + +A +L
Sbjct: 226 --SGEQS--DDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLV 281
Query: 319 GHPXXXXXXXXXXXXXXXTRPSSQKGLSLQEIKQMEYLSKVIDETLRL 366
+P S K ++KQ++Y+ V++E LRL
Sbjct: 282 KNPHVLQKAAEEAARVLVDPVPSYK-----QVKQLKYVGMVLNEALRL 324
>pdb|1ZOA|A Chain A, Crystal Structure Of A328v Mutant Of The Heme Domain Of
P450bm-3 With N-Palmitoylglycine
pdb|1ZOA|B Chain B, Crystal Structure Of A328v Mutant Of The Heme Domain Of
P450bm-3 With N-Palmitoylglycine
Length = 473
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/227 (20%), Positives = 97/227 (42%), Gaps = 21/227 (9%)
Query: 151 SHEALVMYIGNTEDVAIASLEEWAAASKDEPIEFFCETSKLSLKFIMRILFGSTSDSIFS 210
S +A+ Y D+A+ +++W + DE IE + ++L+L I F +S +
Sbjct: 111 SQQAMKGYHAMMVDIAVQLVQKWERLNADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYR 170
Query: 211 SVEKHYI--------DVHDGVHSTAINLPGFAFHKA--LKARKMLVKILQKVVDERKAMK 260
+I + + + + P + +K + K++ ++ K++ +RKA
Sbjct: 171 DQPHPFITSMVRALDEAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKIIADRKA-- 228
Query: 261 KNGEQTAKRGMIDLMMEIED-ESGKKLQDEXXXXXXXXXXXGAHDGPTHTIMWATIYLYG 319
+GEQ+ ++ M+ +D E+G+ L DE H+ + + +A +L
Sbjct: 229 -SGEQS--DDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVK 285
Query: 320 HPXXXXXXXXXXXXXXXTRPSSQKGLSLQEIKQMEYLSKVIDETLRL 366
+P S K ++KQ++Y+ V++E LRL
Sbjct: 286 NPHVLQKAAEEAARVLVDPVPSYK-----QVKQLKYVGMVLNEALRL 327
>pdb|1P0W|A Chain A, F393w Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0W|B Chain B, F393w Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/228 (20%), Positives = 97/228 (42%), Gaps = 21/228 (9%)
Query: 150 ISHEALVMYIGNTEDVAIASLEEWAAASKDEPIEFFCETSKLSLKFIMRILFGSTSDSIF 209
S +A+ Y D+A+ +++W + DE IE + ++L+L I F +S +
Sbjct: 107 FSQQAMKGYHAMMVDIAVQLVQKWERLNADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFY 166
Query: 210 SSVEKHYI--------DVHDGVHSTAINLPGFAFHKA--LKARKMLVKILQKVVDERKAM 259
+I + + + + P + +K + K++ ++ K++ +RKA
Sbjct: 167 RDQPHPFITSMVRALDEAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKIIADRKA- 225
Query: 260 KKNGEQTAKRGMIDLMMEIED-ESGKKLQDEXXXXXXXXXXXGAHDGPTHTIMWATIYLY 318
+GEQ+ ++ M+ +D E+G+ L DE H+ + + +A +L
Sbjct: 226 --SGEQS--DDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLV 281
Query: 319 GHPXXXXXXXXXXXXXXXTRPSSQKGLSLQEIKQMEYLSKVIDETLRL 366
+P S K ++KQ++Y+ V++E LRL
Sbjct: 282 KNPHVLQKAAEEAARVLVDPVPSYK-----QVKQLKYVGMVLNEALRL 324
>pdb|1JPZ|A Chain A, Crystal Structure Of A Complex Of The Heme Domain Of
P450bm- 3 With N-Palmitoylglycine
pdb|1JPZ|B Chain B, Crystal Structure Of A Complex Of The Heme Domain Of
P450bm- 3 With N-Palmitoylglycine
pdb|1ZO9|A Chain A, Crystal Structure Of The Wild Type Heme Domain Of P450bm-3
With N- Palmitoylmethionine
pdb|1ZO9|B Chain B, Crystal Structure Of The Wild Type Heme Domain Of P450bm-3
With N- Palmitoylmethionine
Length = 473
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/228 (20%), Positives = 97/228 (42%), Gaps = 21/228 (9%)
Query: 150 ISHEALVMYIGNTEDVAIASLEEWAAASKDEPIEFFCETSKLSLKFIMRILFGSTSDSIF 209
S +A+ Y D+A+ +++W + DE IE + ++L+L I F +S +
Sbjct: 110 FSQQAMKGYHAMMVDIAVQLVQKWERLNADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFY 169
Query: 210 SSVEKHYI--------DVHDGVHSTAINLPGFAFHKA--LKARKMLVKILQKVVDERKAM 259
+I + + + + P + +K + K++ ++ K++ +RKA
Sbjct: 170 RDQPHPFITSMVRALDEAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKIIADRKA- 228
Query: 260 KKNGEQTAKRGMIDLMMEIED-ESGKKLQDEXXXXXXXXXXXGAHDGPTHTIMWATIYLY 318
+GEQ+ ++ M+ +D E+G+ L DE H+ + + +A +L
Sbjct: 229 --SGEQS--DDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLV 284
Query: 319 GHPXXXXXXXXXXXXXXXTRPSSQKGLSLQEIKQMEYLSKVIDETLRL 366
+P S K ++KQ++Y+ V++E LRL
Sbjct: 285 KNPHVLQKAAEEAARVLVDPVPSYK-----QVKQLKYVGMVLNEALRL 327
>pdb|3M4V|A Chain A, Crystal Structure Of The A330p Mutant Of Cytochrome P450
Bm3
pdb|3M4V|B Chain B, Crystal Structure Of The A330p Mutant Of Cytochrome P450
Bm3
Length = 482
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/228 (20%), Positives = 98/228 (42%), Gaps = 21/228 (9%)
Query: 150 ISHEALVMYIGNTEDVAIASLEEWAAASKDEPIEFFCETSKLSLKFIMRILFGSTSDSIF 209
S +A+ Y D+A+ +++W + DE IE + ++L+L I F +S +
Sbjct: 108 FSQQAMKGYHAMMVDIAVQLVQKWERLNADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFY 167
Query: 210 SSVEKHYI--------DVHDGVHSTAINLPGFAFHKA--LKARKMLVKILQKVVDERKAM 259
+I + + + + P + +K + K++ ++ K++ +RKA
Sbjct: 168 RDQPHPFITSMVRALDEAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKIIADRKA- 226
Query: 260 KKNGEQTAKRGMIDLMMEIED-ESGKKLQDEXXXXXXXXXXXGAHDGPTHTIMWATIYLY 318
+GEQ+ ++ M+ +D E+G+ L DE H+ + + +A +L
Sbjct: 227 --SGEQS--DDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLV 282
Query: 319 GHPXXXXXXXXXXXXXXXTRPSSQKGLSLQEIKQMEYLSKVIDETLRL 366
+P R S +++KQ++Y+ V++E LRL
Sbjct: 283 KNP-----HVLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRL 325
>pdb|3KX3|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX3|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/228 (20%), Positives = 97/228 (42%), Gaps = 21/228 (9%)
Query: 150 ISHEALVMYIGNTEDVAIASLEEWAAASKDEPIEFFCETSKLSLKFIMRILFGSTSDSIF 209
S +A+ Y D+A+ +++W + DE IE + ++L+L I F +S +
Sbjct: 107 FSQQAMKGYHAMMVDIAVQLVQKWERLNADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFY 166
Query: 210 SSVEKHYI--------DVHDGVHSTAINLPGFAFHKA--LKARKMLVKILQKVVDERKAM 259
+I + + + + P + +K + K++ ++ K++ +RKA
Sbjct: 167 RDQPHPFITSMVRALDEAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKIIADRKA- 225
Query: 260 KKNGEQTAKRGMIDLMMEIED-ESGKKLQDEXXXXXXXXXXXGAHDGPTHTIMWATIYLY 318
+GEQ+ ++ M+ +D E+G+ L DE H+ + + +A +L
Sbjct: 226 --SGEQS--DDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLV 281
Query: 319 GHPXXXXXXXXXXXXXXXTRPSSQKGLSLQEIKQMEYLSKVIDETLRL 366
+P S K ++KQ++Y+ V++E LRL
Sbjct: 282 KNPHVLQKAAEEAARVLVDPVPSYK-----QVKQLKYVGMVLNEALRL 324
>pdb|3HF2|A Chain A, Crystal Structure Of The I401p Mutant Of Cytochrome P450
Bm3
pdb|3HF2|B Chain B, Crystal Structure Of The I401p Mutant Of Cytochrome P450
Bm3
Length = 482
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/228 (20%), Positives = 97/228 (42%), Gaps = 21/228 (9%)
Query: 150 ISHEALVMYIGNTEDVAIASLEEWAAASKDEPIEFFCETSKLSLKFIMRILFGSTSDSIF 209
S +A+ Y D+A+ +++W + DE IE + ++L+L I F +S +
Sbjct: 108 FSQQAMKGYHAMMVDIAVQLVQKWERLNADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFY 167
Query: 210 SSVEKHYI--------DVHDGVHSTAINLPGFAFHKA--LKARKMLVKILQKVVDERKAM 259
+I + + + + P + +K + K++ ++ K++ +RKA
Sbjct: 168 RDQPHPFITSMVRALDEAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKIIADRKA- 226
Query: 260 KKNGEQTAKRGMIDLMMEIED-ESGKKLQDEXXXXXXXXXXXGAHDGPTHTIMWATIYLY 318
+GEQ+ ++ M+ +D E+G+ L DE H+ + + +A +L
Sbjct: 227 --SGEQS--DDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLV 282
Query: 319 GHPXXXXXXXXXXXXXXXTRPSSQKGLSLQEIKQMEYLSKVIDETLRL 366
+P S K ++KQ++Y+ V++E LRL
Sbjct: 283 KNPHVLQKAAEEAARVLVDPVPSYK-----QVKQLKYVGMVLNEALRL 325
>pdb|3KX4|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX4|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/228 (20%), Positives = 97/228 (42%), Gaps = 21/228 (9%)
Query: 150 ISHEALVMYIGNTEDVAIASLEEWAAASKDEPIEFFCETSKLSLKFIMRILFGSTSDSIF 209
S +A+ Y D+A+ +++W + DE IE + ++L+L I F +S +
Sbjct: 107 FSQQAMKGYHAMMVDIAVQLVQKWERLNADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFY 166
Query: 210 SSVEKHYI--------DVHDGVHSTAINLPGFAFHKA--LKARKMLVKILQKVVDERKAM 259
+I + + + + P + +K + K++ ++ K++ +RKA
Sbjct: 167 RDQPHPFITSMVRALDEAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKIIADRKA- 225
Query: 260 KKNGEQTAKRGMIDLMMEIED-ESGKKLQDEXXXXXXXXXXXGAHDGPTHTIMWATIYLY 318
+GEQ+ ++ M+ +D E+G+ L DE H+ + + +A +L
Sbjct: 226 --SGEQS--DDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLV 281
Query: 319 GHPXXXXXXXXXXXXXXXTRPSSQKGLSLQEIKQMEYLSKVIDETLRL 366
+P S K ++KQ++Y+ V++E LRL
Sbjct: 282 KNPHVLQKAAEEAARVLVDPVPSYK-----QVKQLKYVGMVLNEALRL 324
>pdb|3EKB|A Chain A, Crystal Structure Of The A264c Mutant Heme Domain Of
Cytochrome P450 Bm3
pdb|3EKB|B Chain B, Crystal Structure Of The A264c Mutant Heme Domain Of
Cytochrome P450 Bm3
Length = 470
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 47/228 (20%), Positives = 97/228 (42%), Gaps = 21/228 (9%)
Query: 150 ISHEALVMYIGNTEDVAIASLEEWAAASKDEPIEFFCETSKLSLKFIMRILFGSTSDSIF 209
S +A+ Y D+A+ +++W + DE IE + ++L+L I F +S +
Sbjct: 107 FSQQAMKGYHAMMVDIAVQLVQKWERLNADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFY 166
Query: 210 SSVEKHYI--------DVHDGVHSTAINLPGFAFHKA--LKARKMLVKILQKVVDERKAM 259
+I + + + + P + +K + K++ ++ K++ +RKA
Sbjct: 167 RDQPHPFITSMVRALDEAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKIIADRKA- 225
Query: 260 KKNGEQTAKRGMIDLMMEIED-ESGKKLQDEXXXXXXXXXXXGAHDGPTHTIMWATIYLY 318
+GEQ+ ++ M+ +D E+G+ L DE H+ + + +A +L
Sbjct: 226 --SGEQS--DDLLTHMLNGKDPETGEPLDDENIRYQIITFLICGHETTSGLLSFALYFLV 281
Query: 319 GHPXXXXXXXXXXXXXXXTRPSSQKGLSLQEIKQMEYLSKVIDETLRL 366
+P S K ++KQ++Y+ V++E LRL
Sbjct: 282 KNPHVLQKAAEEAARVLVDPVPSYK-----QVKQLKYVGMVLNEALRL 324
>pdb|3NPL|A Chain A, Structure Of Ru(Bpy)2(A-Phen)(K97c) P450 Bm3 Heme Domain,
A Ruthenium Modified P450 Bm3 Mutant
pdb|3NPL|B Chain B, Structure Of Ru(Bpy)2(A-Phen)(K97c) P450 Bm3 Heme Domain,
A Ruthenium Modified P450 Bm3 Mutant
Length = 470
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 47/228 (20%), Positives = 97/228 (42%), Gaps = 21/228 (9%)
Query: 150 ISHEALVMYIGNTEDVAIASLEEWAAASKDEPIEFFCETSKLSLKFIMRILFGSTSDSIF 209
S +A+ Y D+A+ +++W + DE IE + ++L+L I F +S +
Sbjct: 108 FSQQAMKGYHAMMVDIAVQLVQKWERLNADEHIEVPEDMTRLTLDTIGLSGFNYRFNSFY 167
Query: 210 SSVEKHYI--------DVHDGVHSTAINLPGFAFHKA--LKARKMLVKILQKVVDERKAM 259
+I + + + + P + +K + K++ ++ K++ +RKA
Sbjct: 168 RDQPHPFITSMVRALDEAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKIIADRKA- 226
Query: 260 KKNGEQTAKRGMIDLMMEIED-ESGKKLQDEXXXXXXXXXXXGAHDGPTHTIMWATIYLY 318
+GEQ+ ++ M+ +D E+G+ L DE H+ + + +A +L
Sbjct: 227 --SGEQS--DDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLV 282
Query: 319 GHPXXXXXXXXXXXXXXXTRPSSQKGLSLQEIKQMEYLSKVIDETLRL 366
+P S K ++KQ++Y+ V++E LRL
Sbjct: 283 KNPHVLQKAAEEAARVLVDPVPSYK-----QVKQLKYVGMVLNEALRL 325
>pdb|3EKF|A Chain A, Crystal Structure Of The A264q Heme Domain Of Cytochrome
P450 Bm3
pdb|3EKF|B Chain B, Crystal Structure Of The A264q Heme Domain Of Cytochrome
P450 Bm3
Length = 470
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 47/228 (20%), Positives = 97/228 (42%), Gaps = 21/228 (9%)
Query: 150 ISHEALVMYIGNTEDVAIASLEEWAAASKDEPIEFFCETSKLSLKFIMRILFGSTSDSIF 209
S +A+ Y D+A+ +++W + DE IE + ++L+L I F +S +
Sbjct: 107 FSQQAMKGYHAMMVDIAVQLVQKWERLNADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFY 166
Query: 210 SSVEKHYI--------DVHDGVHSTAINLPGFAFHKA--LKARKMLVKILQKVVDERKAM 259
+I + + + + P + +K + K++ ++ K++ +RKA
Sbjct: 167 RDQPHPFITSMVRALDEAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKIIADRKA- 225
Query: 260 KKNGEQTAKRGMIDLMMEIED-ESGKKLQDEXXXXXXXXXXXGAHDGPTHTIMWATIYLY 318
+GEQ+ ++ M+ +D E+G+ L DE H+ + + +A +L
Sbjct: 226 --SGEQS--DDLLTHMLNGKDPETGEPLDDENIRYQIITFLIQGHETTSGLLSFALYFLV 281
Query: 319 GHPXXXXXXXXXXXXXXXTRPSSQKGLSLQEIKQMEYLSKVIDETLRL 366
+P S K ++KQ++Y+ V++E LRL
Sbjct: 282 KNPHVLQKAAEEAARVLVDPVPSYK-----QVKQLKYVGMVLNEALRL 324
>pdb|2IJ4|A Chain A, Structure Of The A264k Mutant Of Cytochrome P450 Bm3
pdb|2IJ4|B Chain B, Structure Of The A264k Mutant Of Cytochrome P450 Bm3
Length = 470
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 47/228 (20%), Positives = 97/228 (42%), Gaps = 21/228 (9%)
Query: 150 ISHEALVMYIGNTEDVAIASLEEWAAASKDEPIEFFCETSKLSLKFIMRILFGSTSDSIF 209
S +A+ Y D+A+ +++W + DE IE + ++L+L I F +S +
Sbjct: 107 FSQQAMKGYHAMMVDIAVQLVQKWERLNADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFY 166
Query: 210 SSVEKHYI--------DVHDGVHSTAINLPGFAFHKA--LKARKMLVKILQKVVDERKAM 259
+I + + + + P + +K + K++ ++ K++ +RKA
Sbjct: 167 RDQPHPFITSMVRALDEAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKIIADRKA- 225
Query: 260 KKNGEQTAKRGMIDLMMEIED-ESGKKLQDEXXXXXXXXXXXGAHDGPTHTIMWATIYLY 318
+GEQ+ ++ M+ +D E+G+ L DE H+ + + +A +L
Sbjct: 226 --SGEQS--DDLLTHMLNGKDPETGEPLDDENIRYQIITFLIKGHETTSGLLSFALYFLV 281
Query: 319 GHPXXXXXXXXXXXXXXXTRPSSQKGLSLQEIKQMEYLSKVIDETLRL 366
+P S K ++KQ++Y+ V++E LRL
Sbjct: 282 KNPHVLQKAAEEAARVLVDPVPSYK-----QVKQLKYVGMVLNEALRL 324
>pdb|2IJ3|A Chain A, Structure Of The A264h Mutant Of Cytochrome P450 Bm3
pdb|2IJ3|B Chain B, Structure Of The A264h Mutant Of Cytochrome P450 Bm3
Length = 470
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 47/228 (20%), Positives = 97/228 (42%), Gaps = 21/228 (9%)
Query: 150 ISHEALVMYIGNTEDVAIASLEEWAAASKDEPIEFFCETSKLSLKFIMRILFGSTSDSIF 209
S +A+ Y D+A+ +++W + DE IE + ++L+L I F +S +
Sbjct: 107 FSQQAMKGYHAMMVDIAVQLVQKWERLNADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFY 166
Query: 210 SSVEKHYI--------DVHDGVHSTAINLPGFAFHKA--LKARKMLVKILQKVVDERKAM 259
+I + + + + P + +K + K++ ++ K++ +RKA
Sbjct: 167 RDQPHPFITSMVRALDEAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKIIADRKA- 225
Query: 260 KKNGEQTAKRGMIDLMMEIED-ESGKKLQDEXXXXXXXXXXXGAHDGPTHTIMWATIYLY 318
+GEQ+ ++ M+ +D E+G+ L DE H+ + + +A +L
Sbjct: 226 --SGEQS--DDLLTHMLNGKDPETGEPLDDENIRYQIITFLIHGHETTSGLLSFALYFLV 281
Query: 319 GHPXXXXXXXXXXXXXXXTRPSSQKGLSLQEIKQMEYLSKVIDETLRL 366
+P S K ++KQ++Y+ V++E LRL
Sbjct: 282 KNPHVLQKAAEEAARVLVDPVPSYK-----QVKQLKYVGMVLNEALRL 324
>pdb|1SMI|A Chain A, A Single Mutation Of P450 Bm3 Induces The Conformational
Rearrangement Seen Upon Substrate-Binding In Wild-Type
Enzyme
pdb|1SMI|B Chain B, A Single Mutation Of P450 Bm3 Induces The Conformational
Rearrangement Seen Upon Substrate-Binding In Wild-Type
Enzyme
pdb|1SMJ|A Chain A, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|B Chain B, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|C Chain C, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|D Chain D, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
Length = 471
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 47/228 (20%), Positives = 97/228 (42%), Gaps = 21/228 (9%)
Query: 150 ISHEALVMYIGNTEDVAIASLEEWAAASKDEPIEFFCETSKLSLKFIMRILFGSTSDSIF 209
S +A+ Y D+A+ +++W + DE IE + ++L+L I F +S +
Sbjct: 107 FSQQAMKGYHAMMVDIAVQLVQKWERLNADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFY 166
Query: 210 SSVEKHYI--------DVHDGVHSTAINLPGFAFHKA--LKARKMLVKILQKVVDERKAM 259
+I + + + + P + +K + K++ ++ K++ +RKA
Sbjct: 167 RDQPHPFITSMVRALDEAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKIIADRKA- 225
Query: 260 KKNGEQTAKRGMIDLMMEIED-ESGKKLQDEXXXXXXXXXXXGAHDGPTHTIMWATIYLY 318
+GEQ+ ++ M+ +D E+G+ L DE H+ + + +A +L
Sbjct: 226 --SGEQS--DDLLTHMLNGKDPETGEPLDDENIRYQIITFLIEGHETTSGLLSFALYFLV 281
Query: 319 GHPXXXXXXXXXXXXXXXTRPSSQKGLSLQEIKQMEYLSKVIDETLRL 366
+P S K ++KQ++Y+ V++E LRL
Sbjct: 282 KNPHVLQKAAEEAARVLVDPVPSYK-----QVKQLKYVGMVLNEALRL 324
>pdb|3EKD|A Chain A, Crystal Structure Of The A264m Heme Domain Of Cytochrome
P450 Bm3
pdb|3EKD|B Chain B, Crystal Structure Of The A264m Heme Domain Of Cytochrome
P450 Bm3
Length = 470
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 47/228 (20%), Positives = 97/228 (42%), Gaps = 21/228 (9%)
Query: 150 ISHEALVMYIGNTEDVAIASLEEWAAASKDEPIEFFCETSKLSLKFIMRILFGSTSDSIF 209
S +A+ Y D+A+ +++W + DE IE + ++L+L I F +S +
Sbjct: 107 FSQQAMKGYHAMMVDIAVQLVQKWERLNADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFY 166
Query: 210 SSVEKHYI--------DVHDGVHSTAINLPGFAFHKA--LKARKMLVKILQKVVDERKAM 259
+I + + + + P + +K + K++ ++ K++ +RKA
Sbjct: 167 RDQPHPFITSMVRALDEAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKIIADRKA- 225
Query: 260 KKNGEQTAKRGMIDLMMEIED-ESGKKLQDEXXXXXXXXXXXGAHDGPTHTIMWATIYLY 318
+GEQ+ ++ M+ +D E+G+ L DE H+ + + +A +L
Sbjct: 226 --SGEQS--DDLLTHMLNGKDPETGEPLDDENIRYQIITFLIMGHETTSGLLSFALYFLV 281
Query: 319 GHPXXXXXXXXXXXXXXXTRPSSQKGLSLQEIKQMEYLSKVIDETLRL 366
+P S K ++KQ++Y+ V++E LRL
Sbjct: 282 KNPHVLQKAAEEAARVLVDPVPSYK-----QVKQLKYVGMVLNEALRL 324
>pdb|2Q9F|A Chain A, Crystal Structure Of Human Cytochrome P450 46a1 In Complex
With Cholesterol-3-Sulphate
pdb|2Q9G|A Chain A, Crystal Structure Of Human Cytochrome P450 46a1
pdb|3MDM|A Chain A, Thioperamide Complex Of Cytochrome P450 46a1
pdb|3MDR|A Chain A, Tranylcypromine Complex Of Cytochrome P450 46a1
pdb|3MDR|B Chain B, Tranylcypromine Complex Of Cytochrome P450 46a1
pdb|3MDT|A Chain A, Voriconazole Complex Of Cytochrome P450 46a1
pdb|3MDT|B Chain B, Voriconazole Complex Of Cytochrome P450 46a1
pdb|3MDV|A Chain A, Clotrimazole Complex Of Cytochrome P450 46a1
pdb|3MDV|B Chain B, Clotrimazole Complex Of Cytochrome P450 46a1
pdb|4ENH|A Chain A, Crystal Structure Of Human Cytochrome P450 Cyp46a1 With
Fluvoxamine Bound
pdb|4FIA|A Chain A, Crystal Structure Of Human Cyp46a1 P450 With Bicalutamide
Bound
Length = 456
Score = 35.8 bits (81), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 67/334 (20%), Positives = 134/334 (40%), Gaps = 30/334 (8%)
Query: 69 ETFIDSIVERYGRTGVYKTHLFGNPSIIVSSPQTCRRVLMDDE--KFGLGYGKSMT---- 122
+ F+D ++YG V + ++F S+IV+SP++ ++ LM + K Y T
Sbjct: 14 DVFLD-WAKKYG--PVVRVNVFHKTSVIVTSPESVKKFLMSTKYNKDSKMYRALQTVFGE 70
Query: 123 RLAGKNTFVNIAKSEHRRLRKMMTSLMISHEALV--MYIGNTEDVAIASLEEWAAASKDE 180
RL G+ V+ E ++ + L S +LV M N + + + E A A
Sbjct: 71 RLFGQG-LVSECNYERWHKQRRVIDLAFSRSSLVSLMETFNEKAEQLVEILE-AKADGQT 128
Query: 181 PIEFFCETSKLSLKFIMRILFGSTSDSIFSSVEKHYIDVH---DGVHSTAINLPGF--AF 235
P+ + ++ + + FG + + + + V +G+ ++ L F
Sbjct: 129 PVSMQDMLTYTAMDILAKAAFGMETSMLLGAQKPLSQAVKLMLEGITASRNTLAKFLPGK 188
Query: 236 HKALKARKMLVKILQKV----VDERKAMKKNGEQTAKRGMIDLMMEIEDESGKKLQDEXX 291
K L+ + ++ L++V V R+ K GE+ D++ +I DE
Sbjct: 189 RKQLREVRESIRFLRQVGRDWVQRRREALKRGEEVPA----DILTQILKAEEGAQDDEGL 244
Query: 292 XXXXXXXXXGAHDGPTHTIMWATIYLYGHPXXXXXXXXXXXXXXXTRPSSQKGLSLQEIK 351
H+ + + + + L P S++ L +++
Sbjct: 245 LDNFVTFFIAGHETSANHLAFTVMELSRQPEIVARLQAEVDEVI----GSKRYLDFEDLG 300
Query: 352 QMEYLSKVIDETLRLMNLPFLDFREAKTDANIKG 385
+++YLS+V+ E+LRL + FR + + I G
Sbjct: 301 RLQYLSQVLKESLRLYPPAWGTFRLLEEETLIDG 334
>pdb|4I8V|A Chain A, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|B Chain B, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|C Chain C, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|D Chain D, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
Length = 491
Score = 35.4 bits (80), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 7/65 (10%)
Query: 44 PPGDMGWPFLGNMPSFLRAYRSNNPETFIDSIVERYGRTGVYKTHLFGNPSIIVSSPQTC 103
PPG GWP +G+M + NP + + ++YG V + + P +++S T
Sbjct: 13 PPGPWGWPLIGHMLTL-----GKNPHLALSRMSQQYG--DVLQIRIGSTPVVVLSGLDTI 65
Query: 104 RRVLM 108
R+ L+
Sbjct: 66 RQALV 70
>pdb|2HI4|A Chain A, Crystal Structure Of Human Microsomal P450 1a2 In Complex
With Alpha-Naphthoflavone
Length = 495
Score = 33.5 bits (75), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 73/368 (19%), Positives = 124/368 (33%), Gaps = 37/368 (10%)
Query: 44 PPGDMGWPFLGNMPSFLRAYRSNNPETFIDSIVERYGRTGVYKTHLFGNPSIIVSSPQTC 103
PP GWP LG++ + NP + + +RYG V + + P +++S T
Sbjct: 18 PPEPWGWPLLGHVLTL-----GKNPHLALSRMSQRYG--DVLQIRIGSTPVLVLSRLDTI 70
Query: 104 RRVLM---DDEKFGLGYGKSMTRLAGKN-TFVN----IAKSEHRRLRKMMTSLMISHEA- 154
R+ L+ DD K S G++ TF + + R + + + I+ +
Sbjct: 71 RQALVRQGDDFKGRPDLYTSTLITDGQSLTFSTDSGPVWAARRRLAQNALNTFSIASDPA 130
Query: 155 ------LVMYIGNTEDVAIASLEEWAAASK--DEPIEFFCETSKLSLKFIMRILFGSTSD 206
L ++ I+ L+E A D + + + F +SD
Sbjct: 131 SSSSCYLEEHVSKEAKALISRLQELMAGPGHFDPYNQVVVSVANVIGAMCFGQHFPESSD 190
Query: 207 SIFSSVEKHYIDVHDGVHSTAIN-------LPGFAFHKALKARKMLVKILQKVVDER-KA 258
+ S V+ + V ++ LP A + + + LQK V E +
Sbjct: 191 EMLSLVKNTHEFVETASSGNPLDFFPILRYLPNPALQRFKAFNQRFLWFLQKTVQEHYQD 250
Query: 259 MKKNGEQTAKRGMIDLMMEIEDESGKKLQDEXXXXXXXXXXXGAHDGPTHTIMWATIYLY 318
KN + + + SG + E D T I W+ +YL
Sbjct: 251 FDKNSVRDITGALFKHSKKGPRASGNLIPQEKIVNLVNDIFGAGFDTVTTAISWSLMYLV 310
Query: 319 GHPXXXXXXXXXXXXXXXTRPSSQKGLSLQEIKQMEYLSKVIDETLRLMN-LPFLDFREA 377
P T ++ L + Q+ YL I ET R + LPF
Sbjct: 311 TKP----EIQRKIQKELDTVIGRERRPRLSDRPQLPYLEAFILETFRHSSFLPFTIPHST 366
Query: 378 KTDANIKG 385
D + G
Sbjct: 367 TRDTTLNG 374
>pdb|2PG7|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
Length = 476
Score = 32.7 bits (73), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 35/83 (42%), Gaps = 12/83 (14%)
Query: 43 LPPGDMGWPFLGNMPSFLRAYRSNNPETFIDS---IVERYGRTGVYKTHLFGNPSIIVSS 99
LPPG PF+GN Y N E +S I ERYG V+ HL +++
Sbjct: 11 LPPGPTPLPFIGN-------YLQLNTEQMYNSLMKISERYG--PVFTIHLGPRRVVVLCG 61
Query: 100 PQTCRRVLMDDEKFGLGYGKSMT 122
R L+D + G G+ T
Sbjct: 62 HDAVREALVDQAEEFSGRGEQAT 84
>pdb|2PG5|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 N297q
Length = 476
Score = 32.7 bits (73), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 35/83 (42%), Gaps = 12/83 (14%)
Query: 43 LPPGDMGWPFLGNMPSFLRAYRSNNPETFIDS---IVERYGRTGVYKTHLFGNPSIIVSS 99
LPPG PF+GN Y N E +S I ERYG V+ HL +++
Sbjct: 11 LPPGPTPLPFIGN-------YLQLNTEQMYNSLMKISERYG--PVFTIHLGPRRVVVLCG 61
Query: 100 PQTCRRVLMDDEKFGLGYGKSMT 122
R L+D + G G+ T
Sbjct: 62 HDAVREALVDQAEEFSGRGEQAT 84
>pdb|1Z10|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z11|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|2FDU|A Chain A, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|B Chain B, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|C Chain C, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|D Chain D, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|A Chain A, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|B Chain B, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|C Chain C, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|D Chain D, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDY|A Chain A, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|B Chain B, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|C Chain C, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|D Chain D, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|3T3R|A Chain A, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|B Chain B, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|C Chain C, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|D Chain D, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|4EJJ|A Chain A, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|B Chain B, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|C Chain C, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|D Chain D, Human Cytochrome P450 2a6 In Complex With Nicotine
Length = 476
Score = 32.7 bits (73), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 35/83 (42%), Gaps = 12/83 (14%)
Query: 43 LPPGDMGWPFLGNMPSFLRAYRSNNPETFIDS---IVERYGRTGVYKTHLFGNPSIIVSS 99
LPPG PF+GN Y N E +S I ERYG V+ HL +++
Sbjct: 11 LPPGPTPLPFIGN-------YLQLNTEQMYNSLMKISERYG--PVFTIHLGPRRVVVLCG 61
Query: 100 PQTCRRVLMDDEKFGLGYGKSMT 122
R L+D + G G+ T
Sbjct: 62 HDAVREALVDQAEEFSGRGEQAT 84
>pdb|3EBS|A Chain A, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|B Chain B, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|C Chain C, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|D Chain D, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3T3Q|A Chain A, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|B Chain B, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|C Chain C, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|D Chain D, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
Length = 476
Score = 32.7 bits (73), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 35/83 (42%), Gaps = 12/83 (14%)
Query: 43 LPPGDMGWPFLGNMPSFLRAYRSNNPETFIDS---IVERYGRTGVYKTHLFGNPSIIVSS 99
LPPG PF+GN Y N E +S I ERYG V+ HL +++
Sbjct: 11 LPPGPTPLPFIGN-------YLQLNTEQMYNSLMKISERYG--PVFTIHLGPRRVVVLCG 61
Query: 100 PQTCRRVLMDDEKFGLGYGKSMT 122
R L+D + G G+ T
Sbjct: 62 HDAVREALVDQAEEFSGRGEQAT 84
>pdb|2PG6|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
Length = 476
Score = 32.7 bits (73), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 35/83 (42%), Gaps = 12/83 (14%)
Query: 43 LPPGDMGWPFLGNMPSFLRAYRSNNPETFIDS---IVERYGRTGVYKTHLFGNPSIIVSS 99
LPPG PF+GN Y N E +S I ERYG V+ HL +++
Sbjct: 11 LPPGPTPLPFIGN-------YLQLNTEQMYNSLMKISERYG--PVFTIHLGPRRVVVLCG 61
Query: 100 PQTCRRVLMDDEKFGLGYGKSMT 122
R L+D + G G+ T
Sbjct: 62 HDAVREALVDQAEEFSGRGEQAT 84
>pdb|1PO5|A Chain A, Structure Of Mammalian Cytochrome P450 2b4
Length = 476
Score = 32.0 bits (71), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 36/77 (46%), Gaps = 6/77 (7%)
Query: 43 LPPGDMGWPFLGNMPSFLRAYRSNNPETFIDSIVERYGRTGVYKTHLFGNPSIIVSSPQT 102
LPPG P LGN+ L+ R +F+ + E+YG V+ +L P +++
Sbjct: 11 LPPGPSPLPVLGNL---LQMDRKGLLRSFL-RLREKYG--DVFTVYLGSRPVVVLCGTDA 64
Query: 103 CRRVLMDDEKFGLGYGK 119
R L+D + G GK
Sbjct: 65 IREALVDQAEAFSGRGK 81
>pdb|3TK3|A Chain A, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|B Chain B, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|C Chain C, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|D Chain D, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
Length = 476
Score = 32.0 bits (71), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 36/77 (46%), Gaps = 6/77 (7%)
Query: 43 LPPGDMGWPFLGNMPSFLRAYRSNNPETFIDSIVERYGRTGVYKTHLFGNPSIIVSSPQT 102
LPPG P LGN+ L+ R +F+ + E+YG V+ +L P +++
Sbjct: 11 LPPGPSPLPVLGNL---LQMDRKGLLRSFL-RLREKYG--DVFTVYLGSRPVVVLCGTDA 64
Query: 103 CRRVLMDDEKFGLGYGK 119
R L+D + G GK
Sbjct: 65 IREALVDQAEAFSGRGK 81
>pdb|4H1N|A Chain A, Crystal Structure Of P450 2b4 F297a Mutant In Complex With
Anti- Platelet Drug Clopidogrel
Length = 479
Score = 32.0 bits (71), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 36/77 (46%), Gaps = 6/77 (7%)
Query: 43 LPPGDMGWPFLGNMPSFLRAYRSNNPETFIDSIVERYGRTGVYKTHLFGNPSIIVSSPQT 102
LPPG P LGN+ L+ R +F+ + E+YG V+ +L P +++
Sbjct: 11 LPPGPSPLPVLGNL---LQMDRKGLLRSFL-RLREKYG--DVFTVYLGSRPVVVLCGTDA 64
Query: 103 CRRVLMDDEKFGLGYGK 119
R L+D + G GK
Sbjct: 65 IREALVDQAEAFSGRGK 81
>pdb|1SUO|A Chain A, Structure Of Mammalian Cytochrome P450 2b4 With Bound
4-(4- Chlorophenyl)imidazole
pdb|2BDM|A Chain A, Structure Of Cytochrome P450 2b4 With Bound Bifonazole
pdb|3G5N|A Chain A, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|B Chain B, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|C Chain C, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|D Chain D, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|A Chain A, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|B Chain B, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|C Chain C, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|D Chain D, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3KW4|A Chain A, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Ticlopidine
pdb|3ME6|A Chain A, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|B Chain B, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|C Chain C, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|D Chain D, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3MVR|A Chain A, Crystal Structure Of Cytochrome P450 2b4-H226y In A Closed
Conformation
pdb|3MVR|B Chain B, Crystal Structure Of Cytochrome P450 2b4-H226y In A Closed
Conformation
pdb|3R1A|A Chain A, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|B Chain B, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|C Chain C, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|D Chain D, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|E Chain E, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|F Chain F, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|G Chain G, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|H Chain H, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|A Chain A, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|B Chain B, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|C Chain C, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|D Chain D, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3TMZ|A Chain A, Crystal Structure Of P450 2b4(H226y) In Complex With
Amlodipine
pdb|3UAS|A Chain A, Cytochrome P450 2b4 Covalently Bound To The
Mechanism-based Inactivator 9-ethynylphenanthrene
Length = 476
Score = 32.0 bits (71), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 36/77 (46%), Gaps = 6/77 (7%)
Query: 43 LPPGDMGWPFLGNMPSFLRAYRSNNPETFIDSIVERYGRTGVYKTHLFGNPSIIVSSPQT 102
LPPG P LGN+ L+ R +F+ + E+YG V+ +L P +++
Sbjct: 11 LPPGPSPLPVLGNL---LQMDRKGLLRSFL-RLREKYG--DVFTVYLGSRPVVVLCGTDA 64
Query: 103 CRRVLMDDEKFGLGYGK 119
R L+D + G GK
Sbjct: 65 IREALVDQAEAFSGRGK 81
>pdb|2Q6N|A Chain A, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|B Chain B, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|C Chain C, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|D Chain D, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|E Chain E, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|F Chain F, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|G Chain G, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
Length = 478
Score = 32.0 bits (71), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 36/77 (46%), Gaps = 6/77 (7%)
Query: 43 LPPGDMGWPFLGNMPSFLRAYRSNNPETFIDSIVERYGRTGVYKTHLFGNPSIIVSSPQT 102
LPPG P LGN+ L+ R +F+ + E+YG V+ +L P +++
Sbjct: 11 LPPGPSPLPVLGNL---LQMDRKGLLRSFL-RLREKYG--DVFTVYLGSRPVVVLCGTDA 64
Query: 103 CRRVLMDDEKFGLGYGK 119
R L+D + G GK
Sbjct: 65 IREALVDQAEAFSGRGK 81
>pdb|2P85|A Chain A, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|B Chain B, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|C Chain C, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|D Chain D, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|E Chain E, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|F Chain F, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|3T3S|A Chain A, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|B Chain B, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|C Chain C, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|D Chain D, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|E Chain E, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|F Chain F, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|G Chain G, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|H Chain H, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|4EJG|A Chain A, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|B Chain B, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|C Chain C, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|D Chain D, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|E Chain E, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|F Chain F, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|G Chain G, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|H Chain H, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJH|A Chain A, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|B Chain B, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|C Chain C, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|D Chain D, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|E Chain E, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|F Chain F, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|G Chain G, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|H Chain H, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJI|A Chain A, Human Cytochrome P450 2a13 In Complex With Two Molecules
Of 4- (Methylnitrosamino)-1-(3-Puridyl)-1-Butanone
Length = 476
Score = 31.2 bits (69), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 35/83 (42%), Gaps = 12/83 (14%)
Query: 43 LPPGDMGWPFLGNMPSFLRAYRSNNPETFIDS---IVERYGRTGVYKTHLFGNPSIIVSS 99
LPPG PF+GN Y N E +S I ERYG V+ HL +++
Sbjct: 11 LPPGPTPLPFIGN-------YLQLNTEQMYNSLMKISERYG--PVFTIHLGPRRVVVLCG 61
Query: 100 PQTCRRVLMDDEKFGLGYGKSMT 122
+ L+D + G G+ T
Sbjct: 62 HDAVKEALVDQAEEFSGRGEQAT 84
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 29.3 bits (64), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 28/47 (59%), Gaps = 3/47 (6%)
Query: 158 YIGNTEDVAIASLEEWAAASKDEPIEFFCETSKLSLKFIMRILFGST 204
++G+T+ +A++ A S D EFF +TS+L+ FI ++L T
Sbjct: 218 FLGDTKQETLANI---TAVSYDFDEEFFSQTSELAKDFIRKLLVKET 261
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 29.3 bits (64), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 28/47 (59%), Gaps = 3/47 (6%)
Query: 158 YIGNTEDVAIASLEEWAAASKDEPIEFFCETSKLSLKFIMRILFGST 204
++G+T+ +A++ A S D EFF +TS+L+ FI ++L T
Sbjct: 218 FLGDTKQETLANI---TAVSYDFDEEFFSQTSELAKDFIRKLLVKET 261
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 28.9 bits (63), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 28/47 (59%), Gaps = 3/47 (6%)
Query: 158 YIGNTEDVAIASLEEWAAASKDEPIEFFCETSKLSLKFIMRILFGST 204
++G+T+ +A++ A S D EFF +TS+L+ FI ++L T
Sbjct: 218 FLGDTKQETLANI---TAVSYDFDEEFFSQTSELAKDFIRKLLVKET 261
>pdb|1SQS|A Chain A, X-Ray Crystal Structure Protein Sp1951 Of Streptococcus
Pneumoniae. Northeast Structural Genomics Consortium
Target Spr27.
pdb|1SQS|B Chain B, X-Ray Crystal Structure Protein Sp1951 Of Streptococcus
Pneumoniae. Northeast Structural Genomics Consortium
Target Spr27.
pdb|2OYS|A Chain A, Crystal Structure Of Sp1951 Protein From Streptococcus
Pneumoniae In Complex With Fmn, Northeast Structural
Genomics Target Spr27
pdb|2OYS|B Chain B, Crystal Structure Of Sp1951 Protein From Streptococcus
Pneumoniae In Complex With Fmn, Northeast Structural
Genomics Target Spr27
Length = 242
Score = 28.5 bits (62), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
Query: 83 GVYKTHLFGNPSIIVSSPQTCRRVLMDDEKF--GLGYGKSMTRLAGK 127
GV K L + II+SSP + V +D + F +G + RLAGK
Sbjct: 71 GVIKKELLESDIIIISSPVYLQNVSVDTKNFIERIGGWSHLFRLAGK 117
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.321 0.136 0.397
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,423,290
Number of Sequences: 62578
Number of extensions: 397509
Number of successful extensions: 1092
Number of sequences better than 100.0: 75
Number of HSP's better than 100.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 70
Number of HSP's that attempted gapping in prelim test: 995
Number of HSP's gapped (non-prelim): 80
length of query: 415
length of database: 14,973,337
effective HSP length: 101
effective length of query: 314
effective length of database: 8,652,959
effective search space: 2717029126
effective search space used: 2717029126
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 53 (25.0 bits)