Query 014951
Match_columns 415
No_of_seqs 163 out of 2099
Neff 10.6
Searched_HMMs 46136
Date Fri Mar 29 01:40:06 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014951.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/014951hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1256 Long-chain acyl-CoA sy 100.0 4.6E-68 1E-72 496.1 38.1 411 1-415 125-542 (691)
2 COG1022 FAA1 Long-chain acyl-C 100.0 4.2E-64 9.1E-69 476.5 36.8 393 1-415 62-464 (613)
3 PLN02614 long-chain acyl-CoA s 100.0 6.1E-63 1.3E-67 491.9 43.4 415 1-415 96-511 (666)
4 PLN02861 long-chain-fatty-acid 100.0 1.7E-62 3.6E-67 489.2 43.1 414 1-415 94-508 (660)
5 PTZ00342 acyl-CoA synthetase; 100.0 3.4E-60 7.3E-65 471.4 44.1 400 4-415 114-585 (746)
6 PLN02430 long-chain-fatty-acid 100.0 6.7E-60 1.5E-64 469.6 43.7 415 1-415 93-508 (660)
7 PLN02736 long-chain acyl-CoA s 100.0 5.5E-60 1.2E-64 471.8 42.5 405 1-415 95-502 (651)
8 KOG1180 Acyl-CoA synthetase [L 100.0 7.7E-60 1.7E-64 422.4 30.4 406 1-415 106-530 (678)
9 PLN02387 long-chain-fatty-acid 100.0 5.2E-58 1.1E-62 458.7 41.3 409 1-415 123-550 (696)
10 KOG1176 Acyl-CoA synthetase [L 100.0 7.6E-59 1.6E-63 437.4 31.9 351 5-415 68-423 (537)
11 PTZ00216 acyl-CoA synthetase; 100.0 5.3E-57 1.2E-61 452.5 39.6 402 1-415 138-551 (700)
12 KOG1177 Long chain fatty acid 100.0 9.9E-56 2.1E-60 389.7 27.2 353 1-415 94-476 (596)
13 COG0318 CaiC Acyl-CoA syntheta 100.0 7.2E-55 1.6E-59 424.0 34.9 352 1-415 55-416 (534)
14 COG0365 Acs Acyl-coenzyme A sy 100.0 1.4E-54 3.1E-59 406.3 30.2 342 4-415 61-411 (528)
15 PTZ00237 acetyl-CoA synthetase 100.0 1.1E-51 2.5E-56 410.5 32.1 367 1-415 109-507 (647)
16 PLN02654 acetate-CoA ligase 100.0 3.9E-51 8.5E-56 408.0 34.9 364 1-415 137-528 (666)
17 PRK06334 long chain fatty acid 100.0 4.6E-51 1E-55 399.2 34.0 345 7-415 65-425 (539)
18 PLN02860 o-succinylbenzoate-Co 100.0 5.2E-51 1.1E-55 401.5 33.7 355 1-415 49-429 (563)
19 PRK04319 acetyl-CoA synthetase 100.0 1E-50 2.3E-55 400.2 33.5 353 1-415 90-447 (570)
20 PF00501 AMP-binding: AMP-bind 100.0 6.8E-51 1.5E-55 387.1 27.4 351 1-415 38-403 (417)
21 PRK08180 feruloyl-CoA synthase 100.0 6.9E-50 1.5E-54 396.9 35.7 345 1-415 86-459 (614)
22 PRK07529 AMP-binding domain pr 100.0 7E-50 1.5E-54 397.6 34.8 361 1-415 75-460 (632)
23 TIGR02188 Ac_CoA_lig_AcsA acet 100.0 7.1E-50 1.5E-54 398.3 34.6 360 1-415 105-490 (625)
24 PRK07788 acyl-CoA synthetase; 100.0 8.2E-50 1.8E-54 392.4 33.5 351 1-415 91-442 (549)
25 PLN02574 4-coumarate--CoA liga 100.0 1.2E-49 2.5E-54 391.7 33.6 356 2-415 84-445 (560)
26 TIGR02316 propion_prpE propion 100.0 2.2E-49 4.8E-54 394.2 34.6 360 1-415 100-487 (628)
27 PRK00174 acetyl-CoA synthetase 100.0 3.6E-49 7.9E-54 393.8 35.2 359 1-415 115-498 (637)
28 PRK13295 cyclohexanecarboxylat 100.0 1.9E-48 4.2E-53 382.3 36.1 347 1-415 72-434 (547)
29 PRK12582 acyl-CoA synthetase; 100.0 1.5E-48 3.2E-53 388.1 34.4 344 1-410 97-462 (624)
30 PRK07656 long-chain-fatty-acid 100.0 4.5E-48 9.6E-53 377.7 34.9 355 1-415 47-407 (513)
31 PRK09274 peptide synthase; Pro 100.0 3.9E-48 8.5E-53 380.9 32.9 344 1-415 58-435 (552)
32 PRK13382 acyl-CoA synthetase; 100.0 8.3E-48 1.8E-52 376.7 34.2 346 1-415 85-431 (537)
33 PRK08314 long-chain-fatty-acid 100.0 9.1E-48 2E-52 378.1 34.5 358 2-415 53-431 (546)
34 PLN02246 4-coumarate--CoA liga 100.0 1.1E-47 2.3E-52 376.4 34.9 353 1-415 67-427 (537)
35 PRK05857 acyl-CoA synthetase; 100.0 2.5E-48 5.4E-53 380.6 30.3 352 1-415 58-417 (540)
36 PRK06187 long-chain-fatty-acid 100.0 1.3E-47 2.7E-52 375.3 34.2 357 1-415 48-410 (521)
37 PRK07008 long-chain-fatty-acid 100.0 1.7E-47 3.8E-52 374.8 34.5 355 1-415 56-424 (539)
38 PRK05605 long-chain-fatty-acid 100.0 1.2E-47 2.5E-52 379.1 33.5 364 1-415 74-460 (573)
39 PRK05677 long-chain-fatty-acid 100.0 2.9E-47 6.3E-52 375.1 35.2 358 4-415 70-448 (562)
40 PRK10524 prpE propionyl-CoA sy 100.0 1.6E-47 3.6E-52 381.6 32.8 360 1-415 101-488 (629)
41 PRK07638 acyl-CoA synthetase; 100.0 4E-47 8.7E-52 368.2 34.6 331 2-415 44-376 (487)
42 TIGR01217 ac_ac_CoA_syn acetoa 100.0 1.9E-47 4.2E-52 380.9 33.1 359 1-415 131-514 (652)
43 PRK06060 acyl-CoA synthetase; 100.0 1.1E-47 2.4E-52 387.0 31.6 327 1-415 47-380 (705)
44 TIGR02275 DHB_AMP_lig 2,3-dihy 100.0 3.9E-47 8.5E-52 371.6 34.6 350 1-415 65-423 (527)
45 PRK03584 acetoacetyl-CoA synth 100.0 2.6E-47 5.6E-52 381.5 33.5 358 1-415 131-513 (655)
46 PRK07786 long-chain-fatty-acid 100.0 3.9E-47 8.5E-52 372.7 34.1 350 1-415 59-414 (542)
47 PRK03640 O-succinylbenzoic aci 100.0 4.3E-47 9.3E-52 367.9 33.9 329 1-415 44-375 (483)
48 PRK05620 long-chain-fatty-acid 100.0 7.9E-47 1.7E-51 373.0 36.3 361 4-415 59-445 (576)
49 PRK06839 acyl-CoA synthetase; 100.0 4.3E-47 9.3E-52 369.1 33.2 336 4-415 48-386 (496)
50 TIGR03208 cyc_hxne_CoA_lg cycl 100.0 1.1E-46 2.3E-51 369.4 36.2 347 1-415 70-432 (538)
51 PRK08316 acyl-CoA synthetase; 100.0 7.4E-47 1.6E-51 370.0 34.4 354 1-415 53-410 (523)
52 COG1021 EntE Peptide arylation 100.0 1.9E-48 4.1E-53 336.3 19.0 349 1-415 70-429 (542)
53 PRK07514 malonyl-CoA synthase; 100.0 1.8E-46 3.9E-51 365.5 34.8 345 1-415 45-392 (504)
54 PLN02330 4-coumarate--CoA liga 100.0 1.7E-46 3.7E-51 368.5 34.8 350 1-415 72-432 (546)
55 PRK06087 short chain acyl-CoA 100.0 2.5E-46 5.3E-51 367.8 35.9 351 1-415 66-425 (547)
56 PRK05852 acyl-CoA synthetase; 100.0 9.4E-47 2E-51 369.5 32.4 354 1-415 60-423 (534)
57 PRK06155 crotonobetaine/carnit 100.0 2E-46 4.3E-51 367.2 34.7 349 1-415 63-415 (542)
58 TIGR03443 alpha_am_amid L-amin 100.0 2.9E-47 6.3E-52 410.4 31.4 354 1-415 287-693 (1389)
59 PRK10946 entE enterobactin syn 100.0 2.2E-46 4.7E-51 366.8 34.7 351 1-415 65-424 (536)
60 PLN03051 acyl-activating enzym 100.0 1.1E-46 2.3E-51 365.4 32.2 343 16-415 1-372 (499)
61 PRK08043 bifunctional acyl-[ac 100.0 6E-47 1.3E-51 381.9 31.1 341 6-415 252-606 (718)
62 PRK08633 2-acyl-glycerophospho 100.0 9.5E-47 2.1E-51 401.1 34.3 351 5-415 661-1034(1146)
63 PLN03102 acyl-activating enzym 100.0 1.3E-46 2.9E-51 370.8 32.9 357 1-415 56-435 (579)
64 PRK07470 acyl-CoA synthetase; 100.0 1.1E-46 2.4E-51 368.7 32.0 350 1-415 49-409 (528)
65 TIGR03098 ligase_PEP_1 acyl-Co 100.0 2.8E-46 6E-51 365.2 34.6 354 1-415 42-409 (515)
66 PLN03052 acetate--CoA ligase; 100.0 2.1E-46 4.5E-51 375.1 34.3 357 1-415 225-604 (728)
67 TIGR02262 benz_CoA_lig benzoat 100.0 3.7E-46 7.9E-51 363.4 34.9 348 2-415 48-399 (508)
68 PRK08008 caiC putative crotono 100.0 3.5E-46 7.5E-51 364.4 34.8 353 1-415 54-413 (517)
69 PRK12492 long-chain-fatty-acid 100.0 2.3E-46 4.9E-51 368.7 33.7 362 4-415 70-456 (562)
70 PRK07769 long-chain-fatty-acid 100.0 5.1E-47 1.1E-51 378.0 26.8 341 6-415 76-478 (631)
71 PRK07787 acyl-CoA synthetase; 100.0 3.2E-46 6.9E-51 360.2 31.2 322 5-415 41-365 (471)
72 TIGR01733 AA-adenyl-dom amino 100.0 1.2E-45 2.5E-50 350.3 34.0 332 4-415 20-370 (408)
73 PRK10252 entF enterobactin syn 100.0 2.2E-46 4.7E-51 402.2 32.4 336 1-415 500-852 (1296)
74 PRK09088 acyl-CoA synthetase; 100.0 6.5E-46 1.4E-50 359.9 32.5 331 1-415 39-376 (488)
75 PRK06145 acyl-CoA synthetase; 100.0 1.5E-45 3.2E-50 358.3 35.0 341 1-415 44-388 (497)
76 PRK12467 peptide synthase; Pro 100.0 1.1E-46 2.4E-51 431.2 30.4 334 1-415 3137-3486(3956)
77 PRK06188 acyl-CoA synthetase; 100.0 1.3E-45 2.8E-50 360.9 33.2 348 1-415 54-408 (524)
78 TIGR03205 pimA dicarboxylate-- 100.0 1.9E-45 4.1E-50 360.8 34.3 366 1-415 63-436 (541)
79 PRK08315 AMP-binding domain pr 100.0 2.3E-45 5E-50 362.0 34.5 352 1-415 60-442 (559)
80 PRK06164 acyl-CoA synthetase; 100.0 2E-45 4.3E-50 360.9 33.7 355 1-415 52-421 (540)
81 PLN02479 acetate-CoA ligase 100.0 1.5E-45 3.3E-50 363.1 32.7 365 1-415 62-445 (567)
82 PRK13388 acyl-CoA synthetase; 100.0 2.2E-45 4.9E-50 359.6 33.2 338 1-415 43-395 (540)
83 PRK07059 Long-chain-fatty-acid 100.0 2.6E-45 5.6E-50 361.2 33.4 365 1-415 65-450 (557)
84 PRK12476 putative fatty-acid-- 100.0 6.8E-46 1.5E-50 368.4 28.6 338 6-415 89-490 (612)
85 PRK12583 acyl-CoA synthetase; 100.0 5.4E-45 1.2E-49 359.4 34.3 352 1-415 62-443 (558)
86 PRK13383 acyl-CoA synthetase; 100.0 3.3E-45 7.2E-50 357.1 32.0 334 1-415 77-411 (516)
87 PRK12316 peptide synthase; Pro 100.0 1.5E-45 3.2E-50 428.1 33.3 336 1-415 2045-2396(5163)
88 PRK06018 putative acyl-CoA syn 100.0 7.7E-45 1.7E-49 356.5 33.5 355 1-415 56-425 (542)
89 PRK08751 putative long-chain f 100.0 1.1E-44 2.4E-49 357.1 34.0 362 3-415 70-452 (560)
90 PRK12467 peptide synthase; Pro 100.0 2.8E-45 6E-50 419.7 33.9 337 1-415 1616-1969(3956)
91 PRK06710 long-chain-fatty-acid 100.0 6.8E-45 1.5E-49 358.7 32.1 363 1-415 66-446 (563)
92 PRK12406 long-chain-fatty-acid 100.0 1.9E-44 4.1E-49 351.4 33.9 357 1-415 28-394 (509)
93 PRK07867 acyl-CoA synthetase; 100.0 2.1E-44 4.6E-49 351.7 34.0 331 5-415 50-396 (529)
94 PRK08276 long-chain-fatty-acid 100.0 1.4E-44 3E-49 351.9 31.5 353 1-415 28-384 (502)
95 PRK12316 peptide synthase; Pro 100.0 4.3E-45 9.3E-50 424.2 33.0 336 1-415 553-901 (5163)
96 PRK06178 acyl-CoA synthetase; 100.0 2.3E-44 5E-49 355.2 33.4 362 1-415 75-457 (567)
97 PRK13390 acyl-CoA synthetase; 100.0 2.6E-44 5.7E-49 349.7 33.2 344 1-415 41-394 (501)
98 PRK07445 O-succinylbenzoic aci 100.0 8.3E-45 1.8E-49 346.8 28.6 301 1-415 36-339 (452)
99 PRK08974 long-chain-fatty-acid 100.0 5.7E-44 1.2E-48 351.9 35.2 361 3-415 68-447 (560)
100 PRK05691 peptide synthase; Val 100.0 9.2E-45 2E-49 418.7 33.6 338 1-415 3762-4117(4334)
101 PRK05851 long-chain-fatty-acid 100.0 6E-45 1.3E-49 355.5 27.2 326 7-415 52-410 (525)
102 PRK13391 acyl-CoA synthetase; 100.0 7.4E-44 1.6E-48 347.3 34.3 349 1-415 41-397 (511)
103 PRK06814 acylglycerophosphoeth 100.0 2.9E-44 6.3E-49 380.8 33.4 343 4-415 677-1025(1140)
104 TIGR01923 menE O-succinylbenzo 100.0 5E-44 1.1E-48 342.0 31.6 319 1-415 16-335 (436)
105 TIGR01734 D-ala-DACP-lig D-ala 100.0 4.2E-44 9.2E-49 348.6 31.5 333 1-413 42-387 (502)
106 PRK05691 peptide synthase; Val 100.0 2.2E-44 4.7E-49 415.7 31.6 334 1-415 1173-1520(4334)
107 PRK08162 acyl-CoA synthetase; 100.0 7.9E-43 1.7E-47 342.9 34.7 359 1-415 60-431 (545)
108 PRK09192 acyl-CoA synthetase; 100.0 1.4E-43 3.1E-48 349.9 28.7 340 1-415 66-453 (579)
109 PRK08279 long-chain-acyl-CoA s 100.0 4.6E-43 9.9E-48 348.0 31.8 349 1-415 79-454 (600)
110 PRK04813 D-alanine--poly(phosp 100.0 9.7E-43 2.1E-47 339.2 32.5 334 1-415 44-390 (503)
111 PRK05850 acyl-CoA synthetase; 100.0 3.6E-43 7.8E-48 347.5 27.4 345 2-415 53-451 (578)
112 PRK07768 long-chain-fatty-acid 100.0 3.5E-42 7.6E-47 338.2 31.2 339 1-415 46-429 (545)
113 KOG1175 Acyl-CoA synthetase [L 100.0 6.8E-43 1.5E-47 328.3 24.7 353 1-415 113-490 (626)
114 PRK09029 O-succinylbenzoic aci 100.0 1.9E-42 4.1E-47 332.8 28.6 302 1-415 45-346 (458)
115 PRK07798 acyl-CoA synthetase; 100.0 3.9E-41 8.4E-46 330.4 37.0 356 1-415 45-423 (533)
116 PTZ00297 pantothenate kinase; 100.0 6.2E-41 1.4E-45 346.7 38.1 376 1-412 474-857 (1452)
117 PRK08308 acyl-CoA synthetase; 100.0 1.9E-39 4.2E-44 307.7 30.8 279 3-415 26-306 (414)
118 PRK07868 acyl-CoA synthetase; 100.0 4.7E-39 1E-43 332.3 31.4 342 1-415 489-851 (994)
119 KOG1179 Very long-chain acyl-C 100.0 3.6E-37 7.7E-42 278.1 26.5 350 1-415 121-503 (649)
120 COG1020 EntF Non-ribosomal pep 100.0 2.4E-32 5.2E-37 273.6 29.2 335 1-415 269-611 (642)
121 PRK07824 O-succinylbenzoic aci 100.0 7.9E-30 1.7E-34 237.2 21.6 210 123-414 31-247 (358)
122 TIGR02155 PA_CoA_ligase phenyl 99.9 1.1E-25 2.4E-30 213.7 21.7 226 124-413 72-302 (422)
123 TIGR02372 4_coum_CoA_lig 4-cou 99.9 1.2E-23 2.7E-28 195.0 18.1 191 127-415 95-290 (386)
124 TIGR03335 F390_ftsA coenzyme F 99.9 1.1E-21 2.4E-26 186.5 23.4 223 124-410 83-308 (445)
125 KOG3628 Predicted AMP-binding 99.9 3.9E-20 8.5E-25 178.8 22.9 352 4-412 822-1231(1363)
126 TIGR03089 conserved hypothetic 99.9 9.4E-21 2E-25 162.9 16.5 180 1-221 44-227 (227)
127 COG1541 PaaK Coenzyme F390 syn 99.8 4.3E-17 9.3E-22 147.9 19.6 223 124-413 87-315 (438)
128 KOG1178 Non-ribosomal peptide 99.6 8.5E-15 1.8E-19 146.1 14.7 271 2-333 87-371 (1032)
129 KOG3628 Predicted AMP-binding 99.5 1.1E-13 2.3E-18 135.0 12.1 355 2-414 143-585 (1363)
130 TIGR02304 aden_form_hyp probab 99.4 6.9E-11 1.5E-15 110.5 20.6 146 129-330 101-251 (430)
131 PF04443 LuxE: Acyl-protein sy 98.6 1.5E-05 3.2E-10 73.2 21.4 223 125-413 87-331 (365)
132 PF03321 GH3: GH3 auxin-respon 97.0 0.0067 1.4E-07 59.2 11.1 32 123-154 76-108 (528)
133 PRK09188 serine/threonine prot 95.9 0.0041 8.8E-08 57.4 1.9 20 396-415 205-225 (365)
134 PLN02249 indole-3-acetic acid- 95.9 0.072 1.6E-06 52.5 10.3 30 124-153 97-127 (597)
135 PLN02247 indole-3-acetic acid- 95.5 0.52 1.1E-05 46.4 14.7 32 125-156 87-119 (606)
136 PLN02620 indole-3-acetic acid- 95.1 1.9 4.1E-05 42.6 16.8 32 124-155 98-130 (612)
137 PF00501 AMP-binding: AMP-bind 79.9 18 0.00039 34.1 10.3 90 125-225 8-99 (417)
138 KOG1176 Acyl-CoA synthetase [L 74.1 44 0.00096 33.0 11.1 93 144-237 43-137 (537)
139 KOG0023 Alcohol dehydrogenase, 68.4 29 0.00063 31.3 7.5 72 1-75 174-245 (360)
140 PRK09274 peptide synthase; Pro 66.1 60 0.0013 32.1 10.6 99 126-227 20-121 (552)
141 TIGR02370 pyl_corrinoid methyl 66.1 78 0.0017 26.5 11.0 55 174-228 85-144 (197)
142 COG1541 PaaK Coenzyme F390 syn 65.8 14 0.0003 35.1 5.4 88 2-90 127-221 (438)
143 TIGR02155 PA_CoA_ligase phenyl 65.3 16 0.00034 34.9 6.0 67 4-71 114-182 (422)
144 PF06543 Lac_bphage_repr: Lact 64.4 5.2 0.00011 24.2 1.5 26 293-318 22-47 (49)
145 PRK06187 long-chain-fatty-acid 64.3 92 0.002 30.3 11.4 85 147-234 32-118 (521)
146 PLN03102 acyl-activating enzym 64.3 88 0.0019 31.2 11.4 85 146-233 39-125 (579)
147 PLN02736 long-chain acyl-CoA s 64.2 1.3E+02 0.0028 30.6 12.7 88 145-235 77-166 (651)
148 PLN03052 acetate--CoA ligase; 63.5 1.1E+02 0.0024 31.7 12.0 101 125-229 188-290 (728)
149 PRK08316 acyl-CoA synthetase; 62.6 99 0.0021 30.1 11.3 88 145-235 35-124 (523)
150 PTZ00237 acetyl-CoA synthetase 62.1 1.2E+02 0.0025 31.0 11.9 96 126-227 75-172 (647)
151 PRK03584 acetoacetyl-CoA synth 61.7 1.1E+02 0.0024 31.0 11.8 97 125-228 97-195 (655)
152 COG1064 AdhP Zn-dependent alco 60.6 38 0.00082 31.0 7.1 60 1-64 159-218 (339)
153 PRK07788 acyl-CoA synthetase; 60.5 65 0.0014 31.8 9.7 85 146-233 74-160 (549)
154 TIGR02188 Ac_CoA_lig_AcsA acet 60.0 1.2E+02 0.0026 30.6 11.5 98 125-228 70-169 (625)
155 PRK07656 long-chain-fatty-acid 59.8 1.2E+02 0.0027 29.4 11.4 85 146-233 30-116 (513)
156 TIGR03098 ligase_PEP_1 acyl-Co 59.5 1.2E+02 0.0026 29.4 11.3 85 146-233 25-111 (515)
157 PRK13295 cyclohexanecarboxylat 59.5 1.1E+02 0.0023 30.3 10.9 97 126-228 38-136 (547)
158 cd02069 methionine_synthase_B1 58.9 1.1E+02 0.0025 25.9 9.5 55 174-228 90-148 (213)
159 PRK00174 acetyl-CoA synthetase 58.7 1.3E+02 0.0028 30.5 11.5 99 125-229 80-180 (637)
160 PLN02246 4-coumarate--CoA liga 58.3 1.3E+02 0.0028 29.6 11.3 86 145-233 49-136 (537)
161 PF00464 SHMT: Serine hydroxym 58.0 31 0.00067 32.5 6.3 119 6-149 107-245 (399)
162 PRK05857 acyl-CoA synthetase; 58.0 97 0.0021 30.5 10.4 95 125-229 27-123 (540)
163 PLN02654 acetate-CoA ligase 57.3 1.5E+02 0.0032 30.3 11.7 99 125-229 102-202 (666)
164 PRK13388 acyl-CoA synthetase; 57.1 1.4E+02 0.003 29.5 11.2 85 146-233 26-113 (540)
165 KOG1177 Long chain fatty acid 57.0 64 0.0014 31.0 8.0 85 144-231 75-161 (596)
166 PRK06155 crotonobetaine/carnit 56.6 90 0.0019 30.8 9.8 86 146-234 46-133 (542)
167 TIGR02379 ECA_wecE TDP-4-keto- 56.5 22 0.00048 33.3 5.2 56 4-63 66-126 (376)
168 PLN02565 cysteine synthase 56.4 47 0.001 30.3 7.2 62 4-65 60-122 (322)
169 PRK07514 malonyl-CoA synthase; 55.6 1.7E+02 0.0037 28.4 11.6 86 145-233 27-114 (504)
170 PF01041 DegT_DnrJ_EryC1: DegT 55.3 14 0.0003 34.4 3.7 58 2-63 58-120 (363)
171 PRK11706 TDP-4-oxo-6-deoxy-D-g 55.1 24 0.00053 33.0 5.3 56 4-63 66-126 (375)
172 PLN02574 4-coumarate--CoA liga 54.7 1.2E+02 0.0027 30.0 10.5 86 146-233 66-153 (560)
173 TIGR01733 AA-adenyl-dom amino 54.4 76 0.0016 29.7 8.6 64 169-233 21-86 (408)
174 TIGR01217 ac_ac_CoA_syn acetoa 54.0 1.7E+02 0.0036 29.8 11.4 95 127-228 99-195 (652)
175 COG0365 Acs Acyl-coenzyme A sy 53.5 1.4E+02 0.003 29.5 10.1 97 130-232 27-125 (528)
176 TIGR03335 F390_ftsA coenzyme F 53.2 36 0.00077 32.8 6.2 62 3-67 124-187 (445)
177 PRK09088 acyl-CoA synthetase; 52.6 1.8E+02 0.0038 28.1 11.1 80 146-228 22-103 (488)
178 PRK06839 acyl-CoA synthetase; 52.5 2.1E+02 0.0045 27.6 11.6 88 144-233 25-114 (496)
179 COG0318 CaiC Acyl-CoA syntheta 52.1 2.2E+02 0.0047 28.2 11.6 93 126-228 25-119 (534)
180 PRK04319 acetyl-CoA synthetase 51.8 1.6E+02 0.0036 29.2 10.9 86 145-233 72-159 (570)
181 PRK05850 acyl-CoA synthetase; 50.9 2.1E+02 0.0046 28.4 11.5 87 145-235 34-125 (578)
182 TIGR02316 propion_prpE propion 50.9 2.2E+02 0.0048 28.7 11.8 98 125-228 65-164 (628)
183 COG0399 WecE Predicted pyridox 50.8 32 0.0007 32.0 5.1 58 2-63 67-129 (374)
184 PRK03640 O-succinylbenzoic aci 50.2 2.4E+02 0.0052 27.1 11.6 85 145-232 26-112 (483)
185 PRK07798 acyl-CoA synthetase; 50.1 2.2E+02 0.0048 27.7 11.5 87 145-234 27-115 (533)
186 PRK08008 caiC putative crotono 50.0 2.4E+02 0.0051 27.5 11.6 102 125-233 20-123 (517)
187 PRK08279 long-chain-acyl-CoA s 49.9 1.9E+02 0.0041 28.9 11.1 86 146-234 62-149 (600)
188 PRK15407 lipopolysaccharide bi 49.4 48 0.0011 31.8 6.4 56 4-63 106-166 (438)
189 PRK05605 long-chain-fatty-acid 49.3 1.2E+02 0.0027 30.0 9.6 85 146-233 57-143 (573)
190 PRK07470 acyl-CoA synthetase; 49.3 2.1E+02 0.0045 28.0 11.1 85 146-233 32-118 (528)
191 PRK08276 long-chain-fatty-acid 49.0 1.7E+02 0.0036 28.4 10.3 85 146-233 11-97 (502)
192 PRK13383 acyl-CoA synthetase; 48.9 1.3E+02 0.0028 29.4 9.5 85 146-233 60-146 (516)
193 PRK08314 long-chain-fatty-acid 48.7 1.1E+02 0.0024 30.0 9.2 87 146-235 35-124 (546)
194 PLN02330 4-coumarate--CoA liga 48.5 1.5E+02 0.0033 29.2 10.0 86 145-233 54-141 (546)
195 cd02070 corrinoid_protein_B12- 48.3 1.6E+02 0.0036 24.6 9.4 53 175-227 85-141 (201)
196 PRK07529 AMP-binding domain pr 46.7 2E+02 0.0044 29.1 10.7 98 125-227 38-137 (632)
197 PRK13391 acyl-CoA synthetase; 46.4 2.8E+02 0.0061 27.0 11.4 99 125-233 10-110 (511)
198 PRK08315 AMP-binding domain pr 46.1 75 0.0016 31.4 7.5 65 4-68 235-301 (559)
199 PRK06334 long chain fatty acid 46.0 1.1E+02 0.0024 30.2 8.5 82 146-233 45-128 (539)
200 TIGR03208 cyc_hxne_CoA_lg cycl 45.9 2.4E+02 0.0051 27.8 10.9 82 145-229 52-135 (538)
201 cd02067 B12-binding B12 bindin 45.4 1.3E+02 0.0028 22.5 7.4 46 20-65 14-59 (119)
202 PRK02261 methylaspartate mutas 45.1 1.5E+02 0.0032 23.1 8.2 46 20-65 18-63 (137)
203 PRK02261 methylaspartate mutas 45.1 1.5E+02 0.0032 23.1 11.2 45 183-227 15-62 (137)
204 PRK06164 acyl-CoA synthetase; 44.4 1.6E+02 0.0035 28.9 9.5 81 146-229 35-117 (540)
205 PF00818 Ice_nucleation: Ice n 44.3 8.9 0.00019 17.3 0.3 9 321-329 1-9 (16)
206 PRK05677 long-chain-fatty-acid 43.9 2.8E+02 0.0061 27.5 11.1 86 145-232 48-135 (562)
207 PLN02861 long-chain-fatty-acid 43.2 2.3E+02 0.005 28.9 10.5 87 145-234 76-164 (660)
208 PRK06087 short chain acyl-CoA 42.7 2.2E+02 0.0047 28.1 10.1 80 145-227 48-129 (547)
209 PRK10524 prpE propionyl-CoA sy 42.4 3.4E+02 0.0074 27.4 11.6 98 125-228 66-165 (629)
210 PLN02614 long-chain acyl-CoA s 42.3 3.9E+02 0.0085 27.3 12.8 86 145-233 78-165 (666)
211 cd00615 Orn_deC_like Ornithine 41.8 1.4E+02 0.003 26.8 7.8 55 6-63 96-161 (294)
212 PLN03013 cysteine synthase 41.8 1.2E+02 0.0025 29.1 7.4 60 6-65 171-230 (429)
213 COG1167 ARO8 Transcriptional r 41.8 81 0.0017 30.5 6.6 59 6-67 176-237 (459)
214 KOG0025 Zn2+-binding dehydroge 41.3 1.7E+02 0.0036 26.3 7.6 64 5-69 157-222 (354)
215 TIGR03443 alpha_am_amid L-amin 41.3 2.1E+02 0.0045 32.3 10.6 100 125-227 249-350 (1389)
216 PLN02387 long-chain-fatty-acid 41.0 2.2E+02 0.0047 29.4 10.0 88 145-235 105-194 (696)
217 PRK12583 acyl-CoA synthetase; 40.9 2.9E+02 0.0063 27.2 10.7 81 145-228 44-126 (558)
218 PRK08162 acyl-CoA synthetase; 40.6 2E+02 0.0044 28.3 9.5 85 146-233 43-129 (545)
219 TIGR03588 PseC UDP-4-keto-6-de 40.4 79 0.0017 29.6 6.3 56 4-62 64-127 (380)
220 PLN02479 acetate-CoA ligase 40.3 2.4E+02 0.0051 28.1 10.0 85 146-233 45-131 (567)
221 PRK07867 acyl-CoA synthetase; 40.2 2.1E+02 0.0046 28.1 9.5 85 146-232 28-114 (529)
222 PLN02556 cysteine synthase/L-3 39.8 1.2E+02 0.0027 28.3 7.3 59 6-64 107-165 (368)
223 PRK11658 UDP-4-amino-4-deoxy-L 38.9 69 0.0015 30.0 5.6 55 3-61 67-126 (379)
224 PRK07638 acyl-CoA synthetase; 38.5 2.1E+02 0.0047 27.5 9.2 69 4-73 179-248 (487)
225 TIGR01139 cysK cysteine syntha 38.3 1.6E+02 0.0035 26.4 7.7 62 4-66 51-113 (298)
226 PRK07059 Long-chain-fatty-acid 37.7 2.6E+02 0.0055 27.7 9.7 85 145-232 47-133 (557)
227 TIGR01101 V_ATP_synt_F vacuola 37.6 1.8E+02 0.0039 22.0 7.0 76 7-87 3-91 (115)
228 COG0436 Aspartate/tyrosine/aro 37.4 95 0.0021 29.3 6.2 38 198-235 242-279 (393)
229 PRK13382 acyl-CoA synthetase; 37.3 2.8E+02 0.0061 27.3 9.9 85 146-233 68-154 (537)
230 PRK06702 O-acetylhomoserine am 37.3 1.1E+02 0.0024 29.3 6.7 25 305-329 351-376 (432)
231 PRK11761 cysM cysteine synthas 37.1 1.5E+02 0.0033 26.6 7.3 58 6-64 60-117 (296)
232 cd07050 BMC_EutL_repeat2 ethan 36.8 82 0.0018 21.8 4.0 35 3-37 9-43 (87)
233 COG0031 CysK Cysteine synthase 36.5 1.7E+02 0.0037 26.3 7.2 60 4-64 56-116 (300)
234 PRK06178 acyl-CoA synthetase; 36.2 2.7E+02 0.0059 27.6 9.7 86 146-234 58-145 (567)
235 TIGR01501 MthylAspMutase methy 36.0 2.1E+02 0.0045 22.3 9.3 45 183-227 13-60 (134)
236 PLN02860 o-succinylbenzoate-Co 35.9 2.1E+02 0.0046 28.4 8.8 80 146-228 32-113 (563)
237 PRK12406 long-chain-fatty-acid 35.8 2.8E+02 0.0061 26.9 9.6 87 146-235 11-99 (509)
238 TIGR01923 menE O-succinylbenzo 35.6 2.3E+02 0.0049 26.8 8.7 59 169-228 20-80 (436)
239 TIGR02262 benz_CoA_lig benzoat 35.4 3.4E+02 0.0074 26.3 10.1 85 146-233 30-116 (508)
240 TIGR01136 cysKM cysteine synth 35.2 1.8E+02 0.0039 26.1 7.5 58 7-65 56-113 (299)
241 PRK14807 histidinol-phosphate 35.1 1.5E+02 0.0032 27.3 7.2 55 6-63 97-155 (351)
242 PRK08751 putative long-chain f 34.4 2.7E+02 0.0059 27.5 9.4 86 146-233 50-137 (560)
243 PRK06018 putative acyl-CoA syn 34.2 2.8E+02 0.0061 27.3 9.4 86 145-233 38-125 (542)
244 PRK04870 histidinol-phosphate 34.2 1.8E+02 0.004 26.7 7.6 11 209-219 233-243 (356)
245 PRK07008 long-chain-fatty-acid 33.7 3.4E+02 0.0073 26.7 9.8 84 146-232 39-124 (539)
246 cd02071 MM_CoA_mut_B12_BD meth 33.7 2.1E+02 0.0045 21.6 7.5 46 20-65 14-59 (122)
247 TIGR00936 ahcY adenosylhomocys 33.5 2.5E+02 0.0055 26.7 8.2 58 7-64 30-89 (406)
248 cd01445 TST_Repeats Thiosulfat 33.2 62 0.0013 25.2 3.6 34 2-35 88-124 (138)
249 cd06448 L-Ser-dehyd Serine deh 33.0 1.5E+02 0.0032 27.1 6.5 58 7-65 49-106 (316)
250 PRK06188 acyl-CoA synthetase; 32.7 1.3E+02 0.0028 29.4 6.7 68 4-72 204-271 (524)
251 PRK10696 tRNA 2-thiocytidine b 32.6 2E+02 0.0043 25.3 7.1 60 6-65 26-96 (258)
252 PRK10717 cysteine synthase A; 32.5 2E+02 0.0043 26.3 7.4 59 6-65 61-119 (330)
253 PRK12582 acyl-CoA synthetase; 32.4 2.4E+02 0.0051 28.5 8.6 80 145-227 79-165 (624)
254 PRK05852 acyl-CoA synthetase; 31.9 4E+02 0.0086 26.1 10.0 78 146-226 43-122 (534)
255 PRK12476 putative fatty-acid-- 31.7 5.5E+02 0.012 25.8 12.6 103 126-234 48-157 (612)
256 PRK05939 hypothetical protein; 31.3 1.4E+02 0.003 28.3 6.3 45 28-72 81-126 (397)
257 TIGR03590 PseG pseudaminic aci 31.3 2.8E+02 0.0061 24.6 8.0 79 7-90 29-112 (279)
258 PRK08633 2-acyl-glycerophospho 31.2 4E+02 0.0086 29.3 10.7 97 125-233 628-726 (1146)
259 PRK09331 Sep-tRNA:Cys-tRNA syn 31.0 1.6E+02 0.0035 27.6 6.7 56 6-64 99-166 (387)
260 PRK13390 acyl-CoA synthetase; 30.8 5E+02 0.011 25.1 11.5 82 145-229 23-106 (501)
261 PLN00011 cysteine synthase 30.8 2.5E+02 0.0054 25.7 7.7 59 6-65 65-124 (323)
262 cd01561 CBS_like CBS_like: Thi 30.8 2.4E+02 0.0053 25.1 7.6 59 7-66 51-109 (291)
263 PLN02430 long-chain-fatty-acid 30.5 4.1E+02 0.009 27.1 10.0 83 146-231 76-160 (660)
264 PRK07786 long-chain-fatty-acid 30.1 3.7E+02 0.008 26.4 9.4 85 146-233 42-128 (542)
265 PTZ00342 acyl-CoA synthetase; 30.0 4.1E+02 0.0088 27.7 9.8 105 126-235 75-193 (746)
266 TIGR00649 MG423 conserved hypo 29.7 2.2E+02 0.0048 27.1 7.4 61 5-65 315-384 (422)
267 PRK08574 cystathionine gamma-s 29.3 1.6E+02 0.0035 27.7 6.4 26 304-329 310-336 (385)
268 PRK09422 ethanol-active dehydr 29.1 2.3E+02 0.0049 25.7 7.3 57 4-63 158-214 (338)
269 PRK06710 long-chain-fatty-acid 29.1 3E+02 0.0065 27.2 8.6 83 146-231 49-133 (563)
270 cd01449 TST_Repeat_2 Thiosulfa 28.9 66 0.0014 23.9 3.1 33 3-35 72-104 (118)
271 PLN03051 acyl-activating enzym 28.9 1.6E+02 0.0034 28.8 6.4 69 4-72 155-224 (499)
272 TIGR01138 cysM cysteine syntha 28.8 2.8E+02 0.006 24.9 7.5 58 6-64 56-113 (290)
273 COG1167 ARO8 Transcriptional r 28.7 3.4E+02 0.0073 26.3 8.5 85 169-263 175-264 (459)
274 KOG1250 Threonine/serine dehyd 28.7 1.9E+02 0.0042 27.1 6.2 52 15-66 119-170 (457)
275 cd06447 D-Ser-dehyd D-Serine d 28.1 2.8E+02 0.0061 26.3 7.6 57 12-68 136-192 (404)
276 PRK04813 D-alanine--poly(phosp 28.1 2.9E+02 0.0063 26.6 8.2 80 146-228 27-108 (503)
277 PRK07476 eutB threonine dehydr 28.0 2.1E+02 0.0047 26.0 6.8 50 17-66 74-123 (322)
278 PF03790 KNOX1: KNOX1 domain ; 28.0 55 0.0012 19.9 1.9 18 18-35 12-29 (45)
279 PRK14665 mnmA tRNA-specific 2- 27.6 2.6E+02 0.0056 26.1 7.1 59 6-64 2-68 (360)
280 TIGR02080 O_succ_thio_ly O-suc 27.5 1.9E+02 0.0042 27.1 6.5 25 305-329 308-333 (382)
281 PRK06234 methionine gamma-lyas 27.4 2.2E+02 0.0047 27.0 6.9 25 305-329 324-349 (400)
282 PF00667 FAD_binding_1: FAD bi 27.3 70 0.0015 27.2 3.3 29 5-33 41-69 (219)
283 TIGR02035 D_Ser_am_lyase D-ser 27.1 2.8E+02 0.0061 26.6 7.5 58 12-69 154-211 (431)
284 PRK12492 long-chain-fatty-acid 26.9 5.3E+02 0.011 25.5 9.9 86 145-232 48-135 (562)
285 TIGR03201 dearomat_had 6-hydro 26.7 2.1E+02 0.0044 26.3 6.6 55 4-62 162-216 (349)
286 cd01519 RHOD_HSP67B2 Member of 26.6 1.4E+02 0.0029 21.6 4.4 32 4-35 61-92 (106)
287 TIGR01734 D-ala-DACP-lig D-ala 26.5 3.6E+02 0.0078 26.0 8.6 81 146-229 25-107 (502)
288 PF07722 Peptidase_C26: Peptid 26.4 77 0.0017 27.0 3.3 36 27-63 31-66 (217)
289 KOG1794 N-Acetylglucosamine ki 26.3 97 0.0021 27.6 3.8 74 291-367 70-145 (336)
290 cd02071 MM_CoA_mut_B12_BD meth 26.3 2.9E+02 0.0062 20.8 10.4 46 183-228 11-59 (122)
291 TIGR02539 SepCysS Sep-tRNA:Cys 26.0 2.4E+02 0.0053 26.2 6.9 55 6-63 87-153 (370)
292 PRK06060 acyl-CoA synthetase; 26.0 4.3E+02 0.0093 27.2 9.3 83 146-231 30-114 (705)
293 PLN03026 histidinol-phosphate 26.0 3E+02 0.0066 25.7 7.6 11 7-17 125-135 (380)
294 PRK08974 long-chain-fatty-acid 25.7 3.9E+02 0.0085 26.4 8.8 86 146-233 48-135 (560)
295 PRK06382 threonine dehydratase 25.6 3E+02 0.0065 26.1 7.5 53 15-67 78-130 (406)
296 TIGR03205 pimA dicarboxylate-- 25.6 3.9E+02 0.0085 26.2 8.7 79 146-227 46-126 (541)
297 PRK06381 threonine synthase; V 25.6 2.7E+02 0.0058 25.3 6.9 55 12-66 65-119 (319)
298 PF05221 AdoHcyase: S-adenosyl 25.4 3.2E+02 0.007 24.1 6.8 59 7-65 41-101 (268)
299 PRK10252 entF enterobactin syn 25.3 3.8E+02 0.0082 30.0 9.3 87 4-90 634-728 (1296)
300 PRK15481 transcriptional regul 25.3 2.8E+02 0.0061 26.4 7.4 54 6-63 162-218 (431)
301 TIGR01137 cysta_beta cystathio 25.2 2.9E+02 0.0063 26.6 7.5 60 4-64 56-116 (454)
302 PRK07787 acyl-CoA synthetase; 25.2 4E+02 0.0087 25.5 8.5 74 146-227 25-100 (471)
303 PRK08045 cystathionine gamma-s 25.2 2.6E+02 0.0057 26.3 7.0 25 305-329 309-334 (386)
304 PRK14057 epimerase; Provisiona 25.1 3.8E+02 0.0083 23.5 7.3 54 10-63 100-163 (254)
305 cd06454 KBL_like KBL_like; thi 24.9 2.7E+02 0.0058 25.3 7.0 53 7-63 83-139 (349)
306 PLN03154 putative allyl alcoho 24.8 3.6E+02 0.0079 24.8 7.8 57 4-63 154-211 (348)
307 PRK07503 methionine gamma-lyas 24.7 2.2E+02 0.0048 27.0 6.4 22 308-329 326-348 (403)
308 PRK09029 O-succinylbenzoic aci 24.5 4.7E+02 0.01 24.9 8.8 80 146-228 28-109 (458)
309 cd08281 liver_ADH_like1 Zinc-d 24.5 2.3E+02 0.005 26.3 6.5 57 3-63 186-243 (371)
310 TIGR02822 adh_fam_2 zinc-bindi 24.4 1.8E+02 0.0039 26.5 5.6 56 3-62 160-215 (329)
311 PRK10083 putative oxidoreducta 24.4 2.8E+02 0.0061 25.1 7.0 57 4-63 156-213 (339)
312 PRK08308 acyl-CoA synthetase; 23.6 5.3E+02 0.012 24.2 8.9 82 5-88 138-221 (414)
313 PRK09192 acyl-CoA synthetase; 23.5 6.5E+02 0.014 25.0 9.9 88 144-234 47-143 (579)
314 cd06451 AGAT_like Alanine-glyo 23.4 3.5E+02 0.0075 24.8 7.5 56 6-62 71-130 (356)
315 PRK05620 long-chain-fatty-acid 23.1 7.5E+02 0.016 24.5 12.1 90 144-235 36-127 (576)
316 PRK08180 feruloyl-CoA synthase 22.8 4.8E+02 0.011 26.2 8.8 80 145-227 68-154 (614)
317 PTZ00216 acyl-CoA synthetase; 22.6 7.5E+02 0.016 25.4 10.3 90 143-235 118-209 (700)
318 PRK10595 SOS cell division inh 22.5 2.2E+02 0.0047 23.1 4.9 61 2-62 74-140 (164)
319 PRK09275 aspartate aminotransf 22.0 2.9E+02 0.0063 27.4 6.7 55 6-62 187-247 (527)
320 TIGR02275 DHB_AMP_lig 2,3-dihy 22.0 5E+02 0.011 25.3 8.7 80 146-228 48-129 (527)
321 PLN02723 3-mercaptopyruvate su 22.0 95 0.0021 28.3 3.2 35 3-37 263-297 (320)
322 PRK02991 D-serine dehydratase; 21.4 4E+02 0.0088 25.7 7.4 56 13-68 160-215 (441)
323 TIGR03801 asp_4_decarbox aspar 21.4 2.8E+02 0.0061 27.4 6.4 55 6-62 181-246 (521)
324 cd08230 glucose_DH Glucose deh 21.3 3.1E+02 0.0067 25.2 6.6 54 5-60 169-223 (355)
325 PRK05968 hypothetical protein; 20.8 4E+02 0.0086 25.1 7.3 87 132-239 82-175 (389)
326 KOG1138 Predicted cleavage and 20.6 1E+02 0.0022 29.8 3.0 65 6-70 415-480 (653)
327 PLN02409 serine--glyoxylate am 20.6 4.1E+02 0.009 25.0 7.4 57 6-63 81-144 (401)
328 PRK03317 histidinol-phosphate 20.6 4.1E+02 0.009 24.5 7.4 53 7-62 110-166 (368)
329 cd02065 B12-binding_like B12 b 20.3 3.7E+02 0.008 19.9 6.3 46 21-66 15-60 (125)
330 TIGR03881 KaiC_arch_4 KaiC dom 20.3 4.3E+02 0.0092 22.4 6.9 53 4-56 15-71 (229)
331 KOG2862 Alanine-glyoxylate ami 20.0 6.8E+02 0.015 22.9 7.8 82 6-88 89-179 (385)
No 1
>KOG1256 consensus Long-chain acyl-CoA synthetases (AMP-forming) [Lipid transport and metabolism]
Probab=100.00 E-value=4.6e-68 Score=496.08 Aligned_cols=411 Identities=45% Similarity=0.804 Sum_probs=364.8
Q ss_pred CccCCCCCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEc-CCChhhhhhcCcc-CC
Q 014951 1 MRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQ-ENKIPSILSCLPR-CC 78 (415)
Q Consensus 1 L~~~Gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~ii~~-~~~~~~~~~~~~~-~~ 78 (415)
|++.|+++++.|+|+..|++||+++.+||...|.+.+||..++++++++++++.+.+.++|+| ++....+.+.... ..
T Consensus 125 l~~lG~~~~~~VGIy~~N~pEWiis~~a~~~~~~v~VplYdTlg~ea~~~Ii~~~e~~iv~vd~~~k~~~ll~~~~~~~~ 204 (691)
T KOG1256|consen 125 LRKLGVKEDSKVGIYAFNRPEWIISEMACYAYSLVNVPLYDTLGAEAVHYIINHAEISIVFVDNAKKAEKLLEIKENDSL 204 (691)
T ss_pred HHHhCCCCCceEEEeccCChhhHHhHHHHHhcCCEEeecccCCCHHHHHHHHHhcceeEEEEeCHHHHHHHHhhcccccC
Confidence 457899999999999999999999999999999999999999999999999999999999999 5556667666554 35
Q ss_pred CCccEEEEecCCCchhhHHhhhcCceeecHHHHHhcCC-CCCCC-CCCCCCCeEEEEecCCCCCCCceEEeecHHHHHHh
Q 014951 79 LYLKTIVSFANVSSSQKKEAEELGVSCFSWEEFLQLGT-LDCEL-PPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEV 156 (415)
Q Consensus 79 ~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~ 156 (415)
+.++.++.++.............+..+.+|+++...+. ..... .++.++|.|.|.|||||||.||||++||+|+...+
T Consensus 205 ~~LK~iI~~~~~~~~~~~~~~~~gv~v~S~~e~~~lG~~~~~~~~~~p~p~d~atI~yTSGTTG~PKGVMLTH~Niv~~v 284 (691)
T KOG1256|consen 205 PSLKAIIQLDEPSDELKEKAENNGVEVYSWDEFEELGKKNQRKPRVPPKPDDLATICYTSGTTGNPKGVMLTHRNIVSDV 284 (691)
T ss_pred ccceeEEEecCCchhhhhhhhcCCeEEEEHHHHHhhcccccCCCCCCCCccceEEEEEcCCCCCCCceEEEeccceeehh
Confidence 78999999999988888888888899999999998883 33333 47899999999999999999999999999999966
Q ss_pred hhhhhhhhh-ccccCCCCCEEEEeCChhhHHHHHHHHHhhhcCcEEEEeCCCHHHHHHHHHhhCCeEEEeCcHHHHHHHH
Q 014951 157 LSVDQMFVV-TGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRGDVRYLMEDIQELKPTMFSGVPRVYDRIYT 235 (415)
Q Consensus 157 ~~~~~~~~~-~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~vv~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~ 235 (415)
......... ........|++++++|++|++..+.-...++.|+.+.+.++|+..+.+.+++.+||.+.++|.+|+++.+
T Consensus 285 ~~~~~~~~~~~~~~~~~~dv~lSyLPLAHi~er~~~~~~~~~G~~IgF~~gD~~~l~~dlk~lkPT~f~~VPRVl~riye 364 (691)
T KOG1256|consen 285 AGIFFLSAAENAKATVGDDVYLSYLPLAHIFERVVELYTFYIGAKIGFARGDILKLTDDLKELKPTVFPGVPRVLERIYE 364 (691)
T ss_pred hhhhhhhhcccccccccCceEEEeCcHHHHHHHHHHHhHhhcccEEEEecCChHHHHHHHHHhCCcEEeccHhHHHHHHH
Confidence 543222111 1123334799999999999999998777789999999999999999999999999999999999999999
Q ss_pred HHHHhhhcCChhhHHHHHHHHHhhh-hccccCCCCCCccchhhHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHHHhc
Q 014951 236 GISNKISSGGALSKKLFEFAYNYKL-GNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTS 314 (415)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~~G~~~~~~~~~~~~~~~ 314 (415)
.+.++..+.+.+.+++|++|...+. ..+..+.... ....++++.+++++..+|.++|.+++|++|+++++.++++..+
T Consensus 365 ~I~~~~~~sgflkr~l~~~A~~~k~~~~~~~G~~~~-~~~~~D~lVf~KI~~~LGg~vr~~~sGaAPls~ev~~F~r~~~ 443 (691)
T KOG1256|consen 365 GIQKQVQKSGFLKRKLFNFAMAYKLEHRLMKGKSRS-RDRFADKLVFHKIKQSLGGNVRLIISGAAPLSPEVLTFFRAAL 443 (691)
T ss_pred HHHHHHhcchHHHHHHHHHHHHHHHHHHhhCCCCcc-cchHHHHHHHHHHHHHhcCceeEEEecCCCCCHHHHHHHHHhc
Confidence 9999999999999999999999998 5566665544 7889999999999999999999999999999999999999999
Q ss_pred CCceEEeeccCCCCceeeeecCCcccccCcccccccCeEEEEeecCCCCCCCCCCCCCCeEEEecCCccccccCCchhhh
Q 014951 315 GAPLTQGYGLTESCSGCFTSLADVFNMIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTE 394 (415)
Q Consensus 315 ~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~G~~~~g~~~~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gY~~~~~~~~ 394 (415)
+++|+++||+||+++.++...++.. ..+++|.|+|++++|++|++|.+..+.+ ..|||||+|+++++|||+||++|+
T Consensus 444 g~~v~eGYGlTEts~g~~~~~~~d~-~lgsvG~p~p~~~vKL~dvpe~ny~a~~--~~GEIcirG~~Vf~GYyK~p~~T~ 520 (691)
T KOG1256|consen 444 GCRVLEGYGLTETSAGTTLTLPGDN-VLGSVGPPVPGNEVKLVDVPEMNYDADG--SKGEICVRGPNVFMGYYKDPEKTA 520 (691)
T ss_pred CceeeecccccccCCceEeccCCCC-CCCCcCCcccCceEEEechHHhCcCcCC--CcceEEEecchhceeccCChHHHh
Confidence 9999999999999977776666555 5599999999999999998888877765 589999999999999999999999
Q ss_pred hhh-cCCceecCceEEEcCCCC
Q 014951 395 EVI-VDGWFHTGDIGEWQPMEL 415 (415)
Q Consensus 395 ~~~-~~g~~~TGDlg~~d~~G~ 415 (415)
+++ .|||++|||+|++|++|.
T Consensus 521 e~ideDGWLhTGDiG~~~p~G~ 542 (691)
T KOG1256|consen 521 EAIDEDGWLHTGDIGEWDPNGT 542 (691)
T ss_pred hhhccccccccccceeECCCcc
Confidence 999 899999999999999995
No 2
>COG1022 FAA1 Long-chain acyl-CoA synthetases (AMP-forming) [Lipid metabolism]
Probab=100.00 E-value=4.2e-64 Score=476.53 Aligned_cols=393 Identities=34% Similarity=0.624 Sum_probs=311.6
Q ss_pred CccCCCCCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEcCCChhhhhhcCccCCCC
Q 014951 1 MRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLY 80 (415)
Q Consensus 1 L~~~Gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~ 80 (415)
|++.|+++||+|+|++.|+++|+++.+||+.+|++.||+.+..+++++.++|+.++++++|++..............++.
T Consensus 62 L~~lg~~~gdrvai~a~nr~eW~i~d~a~~~~g~v~Vp~y~t~~~~~~~~iL~~se~~~i~~e~~~~~~~~~~~~~~~~~ 141 (613)
T COG1022 62 LLSLGIPAGDRVAIFAANRPEWAIADLAILALGAVSVPIYSTSTPEQLAYILNESESKVIFVENQELLDLVLPVLEDCPK 141 (613)
T ss_pred HHhcCCCCCCEEEEEeCCCHHHHHHHHHHHHcCCeEEecCCCCCHHHHHHHHhcCCceEEEecchHHHHHHHhhhccccc
Confidence 46789977999999999999999999999999999999999999999999999999999999986554433322221111
Q ss_pred ccEEEEec----CCCchhhHHhhh-cCceeecHHHHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEeecHHHHHH
Q 014951 81 LKTIVSFA----NVSSSQKKEAEE-LGVSCFSWEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAE 155 (415)
Q Consensus 81 ~~~v~~~~----~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~ 155 (415)
........ ............ .......+ ............+..++|+|.|+|||||||.||||++||+|++++
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~dDlatiiYTSGTTG~PKGVmLth~N~~~~ 219 (613)
T COG1022 142 VVDLIVIIDLVREAVEAKALVLEVFPDEGISLF--LIDSAGLEGRIAPPKPDDLATIIYTSGTTGTPKGVMLTHRNLLAQ 219 (613)
T ss_pred hhhhhhhhhhhhhccchhhccccccccccchhh--hhcccccccccCCCCccceEEEEEcCCCCCCCceEEEehHHHHHH
Confidence 11111000 000000000000 00001111 111111122225678999999999999999999999999999999
Q ss_pred hhhhhhhhhhcccc-CCCCCEEEEeCChhhHHHHHHHHHhhhcCcEEEEeCCCHHHHHHHHHhhCCeEEEeCcHHHHHHH
Q 014951 156 VLSVDQMFVVTGKV-CSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRGDVRYLMEDIQELKPTMFSGVPRVYDRIY 234 (415)
Q Consensus 156 ~~~~~~~~~~~~~~-~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~vv~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~ 234 (415)
+......+ . ..++|++++++|+.|++...+.+.....++..++...++..++..+++++||.+.++|.+|+.+.
T Consensus 220 v~~~~~~~-----~~~~~~d~~LsfLPlaHi~Er~~~~~~~~~~g~~~~~~~~~~~~~~dl~~~rPt~m~~VPRvwE~i~ 294 (613)
T COG1022 220 VAGIDEVL-----PPIGPGDRVLSFLPLAHIFERAFEGGLALYGGVTVLFKEDPRTLLEDLKEVRPTVMIGVPRVWEKVY 294 (613)
T ss_pred HHHHHhhC-----CCCCCCcEEEEeCcHHHHHHHHHHHHHHhhcceEEEecCCHHHHHHHHHHhCCeEEeechHHHHHHH
Confidence 99988776 4 78999999999999999998744433444444445559999999999999999999999999999
Q ss_pred HHHHHhhhcCChhhHHHHHHHHHhhhhccccCCC---CCCccchhhHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHH
Q 014951 235 TGISNKISSGGALSKKLFEFAYNYKLGNMKKGMP---QNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLR 311 (415)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~lr~v~~~G~~~~~~~~~~~~ 311 (415)
+.+..++.+.+...+++|++++......+..... ........+++.++++|+.+|.++|++++||+++++++..+++
T Consensus 295 ~~I~~kv~~~~~~~~~if~~a~~~~~~~~~~~~~~~~~~~~~~~~d~LVf~Kir~~lGgri~~~~sGGa~l~~~~~~f~~ 374 (613)
T COG1022 295 KGIMEKVAKAPAVRRKLFRWALKVAYKKISRALLGGGPLSWLLVADRLVFRKIRDALGGRIRYALSGGAPLSPELLHFFR 374 (613)
T ss_pred HHHHHHHHhcchhHHHHHHHHHHHHHHHHHhhhcccCCcchhhhhhHHHHHHHHHHhCCcEEEEEecCCcCCHHHHHHHH
Confidence 9999999999999999999999776433222111 1111123788999999999999999999999999999999999
Q ss_pred HhcCCceEEeeccCCCCceeeeecCCcccccCcccccccCeEEEEeecCCCCCCCCCCCCCCeEEEecCCccccccCCch
Q 014951 312 VTSGAPLTQGYGLTESCSGCFTSLADVFNMIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPD 391 (415)
Q Consensus 312 ~~~~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~G~~~~g~~~~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gY~~~~~ 391 (415)
. .|++++++||+||+++..+.+++..... +++|.|+|++++||+| .|||+||||+||+|||++|+
T Consensus 375 ~-lGi~i~eGYGlTEts~~~~v~~~~~~~~-gtvG~p~p~~evKI~d-------------~GEilVRG~~Vm~GYyk~pe 439 (613)
T COG1022 375 S-LGIPILEGYGLTETSAVVSVNPPDRFVL-GTVGKPLPGIEVKIAD-------------DGEILVRGPNVMKGYYKNPE 439 (613)
T ss_pred H-cCCCeEEEecccccccceEEccccCccc-CCcCCcCCCceEEEcc-------------CceEEEecchhcchhcCChH
Confidence 5 6899999999999999998887776666 9999999999999998 59999999999999999999
Q ss_pred hhhhhh-cCCceecCceEEEcCCCC
Q 014951 392 LTEEVI-VDGWFHTGDIGEWQPMEL 415 (415)
Q Consensus 392 ~~~~~~-~~g~~~TGDlg~~d~~G~ 415 (415)
+|.++| .||||+|||+|.+|++|+
T Consensus 440 ~Taeaf~~DGWf~TGDlg~~d~~g~ 464 (613)
T COG1022 440 ATAEAFTEDGWFRTGDLGELDEDGY 464 (613)
T ss_pred HHhhhccccCCcccCceeEEcCCCc
Confidence 999999 599999999999999986
No 3
>PLN02614 long-chain acyl-CoA synthetase
Probab=100.00 E-value=6.1e-63 Score=491.93 Aligned_cols=415 Identities=57% Similarity=1.034 Sum_probs=326.6
Q ss_pred CccCCCCCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEcCCChhhhhhcCccCCCC
Q 014951 1 MRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLY 80 (415)
Q Consensus 1 L~~~Gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~ 80 (415)
|+++|+++||+|+|+++|++||+++++||+++|++++||++.++++++.+++++++++++|++.+....+..........
T Consensus 96 L~~~Gv~~Gd~Vai~~~n~~e~~~~~lA~~~~Gav~vpl~~~~~~~~l~~il~~~~~~~vi~~~~~~~~~~~~~~~~~~~ 175 (666)
T PLN02614 96 LRSVGVKDEAKCGIYGANSPEWIISMEACNAHGLYCVPLYDTLGAGAVEFIISHSEVSIVFVEEKKISELFKTCPNSTEY 175 (666)
T ss_pred HHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEecCCCCHHHHHHHHhccCCCEEEECHHHHHHHHHhccccccc
Confidence 46789999999999999999999999999999999999999999999999999999999999876655544333222223
Q ss_pred ccEEEEecCCCchhhHHhhhcCceeecHHHHHhcCC-CCCCCCCCCCCCeEEEEecCCCCCCCceEEeecHHHHHHhhhh
Q 014951 81 LKTIVSFANVSSSQKKEAEELGVSCFSWEEFLQLGT-LDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSV 159 (415)
Q Consensus 81 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~~~ 159 (415)
++.++.++.............+.....++++...+. .....+...++|+++|+|||||||.||||++||+++...+...
T Consensus 176 l~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~I~yTSGTTG~PKGV~lth~nl~~~~~~~ 255 (666)
T PLN02614 176 MKTVVSFGGVSREQKEEAETFGLVIYAWDEFLKLGEGKQYDLPIKKKSDICTIMYTSGTTGDPKGVMISNESIVTLIAGV 255 (666)
T ss_pred ceEEEEeCCCChHHhhhhhhcCcEEEEHHHHHhhcccCCCCCCCCCCCceEEEEEcCCCCCCCcEEEEecHHHHHHHHHH
Confidence 566776654221111001111223456777665432 1112234567999999999999999999999999999877654
Q ss_pred hhhhhhccccCCCCCEEEEeCChhhHHHHHHHHHhhhcCcEEEEeCCCHHHHHHHHHhhCCeEEEeCcHHHHHHHHHHHH
Q 014951 160 DQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRGDVRYLMEDIQELKPTMFSGVPRVYDRIYTGISN 239 (415)
Q Consensus 160 ~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~vv~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~ 239 (415)
...+......+..+|++++++|++|.++....+.+++.|+++++.+.++..+++.|++++||+++++|++++.+.+.+..
T Consensus 256 ~~~~~~~~~~~~~~d~~l~~lPl~H~~~~~~~~~~l~~G~~v~~~~~~~~~~~~~i~~~~~T~~~~vP~~~~~l~~~~~~ 335 (666)
T PLN02614 256 IRLLKSANAALTVKDVYLSYLPLAHIFDRVIEECFIQHGAAIGFWRGDVKLLIEDLGELKPTIFCAVPRVLDRVYSGLQK 335 (666)
T ss_pred HhhccccccCCCCCcEEEEeccHHHHHHHHHHHHHHHhCCEEEEeCCCHHHHHHHHHHhCCeEEEecHHHHHHHHHHHHH
Confidence 43321111246789999999999999998766667889999999877999999999999999999999999999987777
Q ss_pred hhhcCChhhHHHHHHHHHhhhhccccCCCCCCccchhhHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHHHhcCCceE
Q 014951 240 KISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLT 319 (415)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~~G~~~~~~~~~~~~~~~~~~~~ 319 (415)
.........+++++++++.++..+..+.......+..+.+.+++++..+++++|.+++||+++++++.++++...+++++
T Consensus 336 ~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~lr~~~~Gga~l~~~~~~~~~~~~~~~i~ 415 (666)
T PLN02614 336 KLSDGGFLKKFVFDSAFSYKFGNMKKGQSHVEASPLCDKLVFNKVKQGLGGNVRIILSGAAPLASHVESFLRVVACCHVL 415 (666)
T ss_pred HHhccCHHHHHHHHHHHHHHHHHHHcCCCCcccchHHHHHHHHHHHHHhCCcEEEEEEcCCCCCHHHHHHHHHhcCCCEE
Confidence 66666777788888888877666555544444455667778889999998899999999999998876555443358999
Q ss_pred EeeccCCCCceeeeecCCcccccCcccccccCeEEEEeecCCCCCCCCCCCCCCeEEEecCCccccccCCchhhhhhhcC
Q 014951 320 QGYGLTESCSGCFTSLADVFNMIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVIVD 399 (415)
Q Consensus 320 ~~yG~tE~~~~~~~~~~~~~~~~~~~G~~~~g~~~~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gY~~~~~~~~~~~~~ 399 (415)
+.||+||++...+...+....+.+++|+|+||++++|+|.++++..+++.|+.|||+|+||+++.|||++|+.|.++|.|
T Consensus 416 ~~YG~TE~~~~~~~~~~~~~~~~gsvG~p~pg~evki~d~~~~~~~~~~~g~~GEl~vrGp~v~~GY~~~pe~T~~~f~d 495 (666)
T PLN02614 416 QGYGLTESCAGTFVSLPDELDMLGTVGPPVPNVDIRLESVPEMEYDALASTPRGEICIRGKTLFSGYYKREDLTKEVLID 495 (666)
T ss_pred eeCchHhhhhheeeeccccCCcCCcccCcCCceEEEEeeecccCcccCCCCCCceEEEcCCcccccccCCHHHhhhhhcc
Confidence 99999999876555444333345899999999999999855544455667899999999999999999999999999999
Q ss_pred CceecCceEEEcCCCC
Q 014951 400 GWFHTGDIGEWQPMEL 415 (415)
Q Consensus 400 g~~~TGDlg~~d~~G~ 415 (415)
|||+|||+|++|+||+
T Consensus 496 Gw~~TGDlg~~d~dG~ 511 (666)
T PLN02614 496 GWLHTGDVGEWQPNGS 511 (666)
T ss_pred CCcccceEEEEcCCCC
Confidence 9999999999999996
No 4
>PLN02861 long-chain-fatty-acid-CoA ligase
Probab=100.00 E-value=1.7e-62 Score=489.19 Aligned_cols=414 Identities=79% Similarity=1.330 Sum_probs=329.7
Q ss_pred CccCCCCCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEcCCChhhhhhcCccCCCC
Q 014951 1 MRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLY 80 (415)
Q Consensus 1 L~~~Gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~ 80 (415)
|.+.|+++||+|+|+++|++||+++++||+++|++++||++.++.+++.+++++++++++|++.+..+.+..........
T Consensus 94 L~~~Gv~~gd~Vai~~~n~~e~~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~~~v~~~~~~~~~~~~~~~~~~~~ 173 (660)
T PLN02861 94 IRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQGITYVPLYDTLGANAVEFIINHAEVSIAFVQESKISSILSCLPKCSSN 173 (660)
T ss_pred HHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCeEEEecCCCCHHHHHHHHHcCCCCEEEECHHHHHHHHHhhhhCCCC
Confidence 45789999999999999999999999999999999999999999999999999999999999877655554433322124
Q ss_pred ccEEEEecCCCchhhHHhhhcCceeecHHHHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEeecHHHHHHhhhhh
Q 014951 81 LKTIVSFANVSSSQKKEAEELGVSCFSWEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVD 160 (415)
Q Consensus 81 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~~~~ 160 (415)
++.++.++..................+++++...+......++..++|+++|+|||||||.||||++||++++..+....
T Consensus 174 l~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dd~a~i~yTSGTTG~PKGV~lth~~l~~~~~~~~ 253 (660)
T PLN02861 174 LKTIVSFGDVSSEQKEEAEELGVSCFSWEEFSLMGSLDCELPPKQKTDICTIMYTSGTTGEPKGVILTNRAIIAEVLSTD 253 (660)
T ss_pred CEEEEEECCCChhhhhhhhcCCcEEEEHHHHHHhCcccCCCCccCCCceEEEEecCCCCCCCCEEEEecHHHHHHHHHHH
Confidence 56777775432111101111122345677766543222223445689999999999999999999999999998876654
Q ss_pred hhhhhccccCCCCCEEEEeCChhhHHHHHHHHHhhhcCcEEEEeCCCHHHHHHHHHhhCCeEEEeCcHHHHHHHHHHHHh
Q 014951 161 QMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRGDVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNK 240 (415)
Q Consensus 161 ~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~vv~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~ 240 (415)
..+......+..+|++++++|++|+++....+.+++.|+++++.+.++..+++.|++++||+++++|++++.+.+.....
T Consensus 254 ~~~~~~~~~~~~~d~~l~~lPl~H~~~~~~~~~~l~~G~~v~~~~~~~~~~~~~i~~~~~T~~~~vP~~~~~l~~~~~~~ 333 (660)
T PLN02861 254 HLLKVTDRVATEEDSYFSYLPLAHVYDQVIETYCISKGASIGFWQGDIRYLMEDVQALKPTIFCGVPRVYDRIYTGIMQK 333 (660)
T ss_pred hccccccccCCCCCEEEEECcHHHHHHHHHHHHHHHhCCEEEEeCCCHHHHHHHHHHhCCcEEeechHHHHHHHHHHHHH
Confidence 43311111246889999999999999987766689999999998779999999999999999999999999999888888
Q ss_pred hhcCChhhHHHHHHHHHhhhhccccCCCCCCccchhhHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHHHhcCC-ceE
Q 014951 241 ISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGA-PLT 319 (415)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~~G~~~~~~~~~~~~~~~~~-~~~ 319 (415)
........+++|+++...++..+..+.......+.++.++++++|..+++++|.+++||+++++++.++++ .++. .++
T Consensus 334 ~~~~~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~lg~~lr~~~~Ggapl~~~~~~~~~-~~~~~~l~ 412 (660)
T PLN02861 334 ISSGGMLRKKLFDFAYNYKLGNLRKGLKQEEASPRLDRLVFDKIKEGLGGRVRLLLSGAAPLPRHVEEFLR-VTSCSVLS 412 (660)
T ss_pred HhccCHHHHHHHHHHHHHHHHHHhcCCCCcCccHhHHHHHHHHHHHHhCCcEEEEEECCCCCCHHHHHHHH-HHcCCCee
Confidence 88888889999999998887766554443334566788889999999999999999999999999866554 5554 799
Q ss_pred EeeccCCCCceeeeecCCcccccCcccccccCeEEEEeecCCCCCCCCCCCCCCeEEEecCCccccccCCchhhhhhhcC
Q 014951 320 QGYGLTESCSGCFTSLADVFNMIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVIVD 399 (415)
Q Consensus 320 ~~yG~tE~~~~~~~~~~~~~~~~~~~G~~~~g~~~~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gY~~~~~~~~~~~~~ 399 (415)
+.||+||+++.++....+.....+++|+|+|+++++|+|.++.+......++.|||+++||+++.|||++|+.|.++|.|
T Consensus 413 ~~YG~TE~~~~~~~~~~~~~~~~gsvG~p~p~~ev~i~d~~~~g~~~~~~~~~GEi~vrGp~v~~GY~~~pe~T~~~f~d 492 (660)
T PLN02861 413 QGYGLTESCGGCFTSIANVFSMVGTVGVPMTTIEARLESVPEMGYDALSDVPRGEICLRGNTLFSGYHKRQDLTEEVLID 492 (660)
T ss_pred EecchhhhhhceeecccccCCCCCCccCccCceEEEEEEccccCcccCCCCCceeEEEcCCcccccccCCHHHHHhhhhc
Confidence 99999999876665443333345899999999999999844433233344568999999999999999999999999999
Q ss_pred CceecCceEEEcCCCC
Q 014951 400 GWFHTGDIGEWQPMEL 415 (415)
Q Consensus 400 g~~~TGDlg~~d~~G~ 415 (415)
|||+|||+|++|+||+
T Consensus 493 Gw~~TGDlg~~d~dG~ 508 (660)
T PLN02861 493 GWFHTGDIGEWQPNGA 508 (660)
T ss_pred cCcccCceEEECCCCc
Confidence 9999999999999996
No 5
>PTZ00342 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=3.4e-60 Score=471.41 Aligned_cols=400 Identities=27% Similarity=0.481 Sum_probs=318.3
Q ss_pred CCCCCC-----------CeEEEEcCCcHhHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEcCCChhhhhh
Q 014951 4 RGVNPG-----------DRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILS 72 (415)
Q Consensus 4 ~Gv~~g-----------d~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~ 72 (415)
.|+++| |+|+|+++|++||+++++||+++|++++|+++.++++++.++|++++++++|++.+..+.+..
T Consensus 114 ~Gv~~g~~~~~~~~g~~d~V~i~~~N~~ew~~~~lA~~~~Gav~Vpl~~~~~~~el~~il~~s~~~~lv~~~~~~~~l~~ 193 (746)
T PTZ00342 114 KGIPEKKYNEEQNNGKFKLLGLYGSNSINWLVADLACMLSGVTTLVMHSKFSIDVIVDILNETKLEWLCLDLDLVEGLLE 193 (746)
T ss_pred cCCCcCccccccccccccEEEEEcCCCHHHHHHHHHHHHcCCeEEEecCCCCHHHHHHHHhcCCCCEEEEcHHHHHHHHH
Confidence 599998 999999999999999999999999999999999999999999999999999998777776665
Q ss_pred cCccCCCCccEEEEecCCCchh------------------h---------------------------------------
Q 014951 73 CLPRCCLYLKTIVSFANVSSSQ------------------K--------------------------------------- 95 (415)
Q Consensus 73 ~~~~~~~~~~~v~~~~~~~~~~------------------~--------------------------------------- 95 (415)
.... .+.++.++.++...... .
T Consensus 194 ~~~~-~~~l~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 272 (746)
T PTZ00342 194 RKNE-LPHLKKLIILDTLIKSKEININKEEKNNGSNVNNNGNKNNKEEQKGNDLSNELEDISLGPLEYDKEKLEKIKDLK 272 (746)
T ss_pred hhcc-CCCceEEEEECCCCcccccccccccccccccccccccccccccccccccccccccccccccccchhhhhhhHHHH
Confidence 4433 35677888886522100 0
Q ss_pred HHhhhcCceeecHHHHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEeecHHHHHHhhhhhhhhhhccccCCCCCE
Q 014951 96 KEAEELGVSCFSWEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDT 175 (415)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~~~~~~~~~~~~~~~~~d~ 175 (415)
......+.....++++...........+..++|+++|+|||||||.||||++||+|+...+....... .......|+
T Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dd~a~IiYTSGTTG~PKGVmlTH~nl~~~~~~~~~~~---~~~~~~~d~ 349 (746)
T PTZ00342 273 EKAKKLGISIILFDDMTKNKTTNYKIQNEDPDFITSIVYTSGTSGKPKGVMLSNKNLYNTVVPLCKHS---IFKKYNPKT 349 (746)
T ss_pred HHhhcCCCEEEEHHHHHhhcccCCCCCCCCccceEEEEEcCCCCCCCCEEEEccHHHHHHHHHHhhcc---cccCCCCCe
Confidence 00000011223344443322112223445789999999999999999999999999998876543211 001235589
Q ss_pred EEEeCChhhHHHHHHHHHhhhcCcEEEEeCCCHHHHHHHHHhhCCeEEEeCcHHHHHHHHHHHHhhhcCChhhHHHHHHH
Q 014951 176 YFSFLPLAHIYDQIIETHCIHKGCSIGFWRGDVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFA 255 (415)
Q Consensus 176 ~l~~~p~~~~~~~~~~~~~l~~G~~vv~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 255 (415)
+++++|++|++++...+.+++.|+++++.+.++..+++.|++++||+++++|.+++++.+.+.....+.+...+++|+++
T Consensus 350 ~ls~LPL~Hi~~~~~~~~~l~~G~~i~~~~~~~~~l~~di~~~~pT~~~~VP~v~~~i~~~i~~~~~~~~~~~~~~~~~a 429 (746)
T PTZ00342 350 HLSYLPISHIYERVIAYLSFMLGGTINIWSKDINYFSKDIYNSKGNILAGVPKVFNRIYTNIMTEINNLPPLKRFLVKKI 429 (746)
T ss_pred EEEeCcHHHHHHHHHHHHHHHcCCEEEEeCCCHHHHHHHHHHhCCcEEEchHHHHHHHHHHHHHHHhhcCHHHHHHHHHH
Confidence 99999999999998778889999999998779999999999999999999999999999988877777788888999999
Q ss_pred HHhhhhccccCCCCCCccchhhHH--HHHHHHHHhCCceeEEEEecCCCCHHHHHHHHHhcCCceEEeeccCCCCceeee
Q 014951 256 YNYKLGNMKKGMPQNKAAPLLDSL--VFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQGYGLTESCSGCFT 333 (415)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~lr~v~~~G~~~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~ 333 (415)
+..+....... ....++.+ .++++|..+++++|.+++||+|+++++.++++..++++++++||+||+++.++.
T Consensus 430 ~~~~~~~~~~~-----~~~~~~~~~~v~~kir~~lg~~lr~~~sGGapl~~~~~~~~~~~~g~~i~~gYGlTEt~~~~~~ 504 (746)
T PTZ00342 430 LSLRKSNNNGG-----FSKFLEGITHISSKIKDKVNPNLEVILNGGGKLSPKIAEELSVLLNVNYYQGYGLTETTGPIFV 504 (746)
T ss_pred HHHHHHhhcCC-----cchHHHHHHHHHHHHHHhhCCCeEEEEEcCCCCCHHHHHHHHHhcCCCEEEeeccCcccceeee
Confidence 88776643211 12223332 578899999999999999999999999999998899999999999999877665
Q ss_pred ecCCcccccCcccccc-cCeEEEEeecCCCCCCCCCCCCCCeEEEecCCccccccCCchhhhhhh-cCCceecCceEEEc
Q 014951 334 SLADVFNMIGTVGVPM-TTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVI-VDGWFHTGDIGEWQ 411 (415)
Q Consensus 334 ~~~~~~~~~~~~G~~~-~g~~~~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gY~~~~~~~~~~~-~~g~~~TGDlg~~d 411 (415)
..+.. ...+++|+|+ |+++++|+|.++.... ...+.|||+++||+++.|||++|+.|+++| .||||+|||+|++|
T Consensus 505 ~~~~~-~~~gsvG~p~~pg~e~ki~d~~~~~~~--~~~~~GEl~vrGp~v~~GY~~~pe~T~~~f~~dGW~~TGDig~~d 581 (746)
T PTZ00342 505 QHADD-NNTESIGGPISPNTKYKVRTWETYKAT--DTLPKGELLIKSDSIFSGYFLEKEQTKNAFTEDGYFKTGDIVQIN 581 (746)
T ss_pred ccCCC-CCcccccCcCCCcEEEEEecccccccC--CCCCceEEEEecCcccccccCChhhhhhhcCcCCcccCCcEEEEC
Confidence 54433 3458999998 9999999984432222 233579999999999999999999999999 59999999999999
Q ss_pred CCCC
Q 014951 412 PMEL 415 (415)
Q Consensus 412 ~~G~ 415 (415)
+||+
T Consensus 582 ~dG~ 585 (746)
T PTZ00342 582 KNGS 585 (746)
T ss_pred CCCe
Confidence 9996
No 6
>PLN02430 long-chain-fatty-acid-CoA ligase
Probab=100.00 E-value=6.7e-60 Score=469.65 Aligned_cols=415 Identities=49% Similarity=0.885 Sum_probs=332.0
Q ss_pred CccCCCCCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEcCCChhhhhhcCccCCCC
Q 014951 1 MRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLY 80 (415)
Q Consensus 1 L~~~Gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~ 80 (415)
|.+.|+++||+|+|+++|++||+++++||+++|++++|+++.++++++.++++.++++++|++...............+.
T Consensus 93 L~~~Gv~~gd~V~i~~~n~~ew~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 172 (660)
T PLN02430 93 LRASGAEPGSRVGIYGSNCPQWIVAMEACAAHSLICVPLYDTLGPGAVDYIVDHAEIDFVFVQDKKIKELLEPDCKSAKR 172 (660)
T ss_pred HHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCeEEEeccCCCHHHHHHHHhccCCCEEEECHHHHHHHHhhhcccCCC
Confidence 45679999999999999999999999999999999999999999999999999999999999875433222211111245
Q ss_pred ccEEEEecCCCchhhHHhhhcCceeecHHHHHhcCC-CCCCCCCCCCCCeEEEEecCCCCCCCceEEeecHHHHHHhhhh
Q 014951 81 LKTIVSFANVSSSQKKEAEELGVSCFSWEEFLQLGT-LDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSV 159 (415)
Q Consensus 81 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~~~ 159 (415)
++.++.++.............+....+|+++...+. ......+..++|+++|+|||||||.||||++||+++...+...
T Consensus 173 l~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~iiyTSGTTG~PKGV~lth~~~~~~~~~~ 252 (660)
T PLN02430 173 LKAIVSFTSVTEEESDKASQIGVKTYSWIDFLHMGKENPSETNPPKPLDICTIMYTSGTSGDPKGVVLTHEAVATFVRGV 252 (660)
T ss_pred ceEEEEECCCChHHhhhhhcCCcEEEEHHHHHHhhccCCCCCCCcCcCceEEEEECCCCCCCCCEEEeecHHHHHHHHHH
Confidence 667777764322111111112334567887765442 1222234468999999999999999999999999999887654
Q ss_pred hhhhhhccccCCCCCEEEEeCChhhHHHHHHHHHhhhcCcEEEEeCCCHHHHHHHHHhhCCeEEEeCcHHHHHHHHHHHH
Q 014951 160 DQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRGDVRYLMEDIQELKPTMFSGVPRVYDRIYTGISN 239 (415)
Q Consensus 160 ~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~vv~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~ 239 (415)
..........++..|++++++|++|.++....+.+++.|+++++...++..+++.+++++||++.++|.+++.+.+....
T Consensus 253 ~~~~~~~~~~~~~~d~~ls~lPl~H~~~~~~~~~~l~~G~~i~~~~~~~~~l~~~l~~~~pt~~~~vP~~~~~l~~~i~~ 332 (660)
T PLN02430 253 DLFMEQFEDKMTHDDVYLSFLPLAHILDRMIEEYFFRKGASVGYYHGDLNALRDDLMELKPTLLAGVPRVFERIHEGIQK 332 (660)
T ss_pred HhhccccccCCCCCCEEEEeCcHHHHHHHHHHHHHHHcCCEEEEeCCChhhHHHHHHHhCCcEEEecHHHHHHHHHHHHH
Confidence 32211111245789999999999999998876677899999988877889999999999999999999999999998888
Q ss_pred hhhcCChhhHHHHHHHHHhhhhccccCCCCCCccchhhHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHHHhcCCceE
Q 014951 240 KISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLT 319 (415)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~~G~~~~~~~~~~~~~~~~~~~~ 319 (415)
.........+.+|+++.+.+...++.+.......+.++.+.+++++..+|+++|.+++||+++++++.++++...+..++
T Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~l~~~~i~~~~G~~lr~~~~gga~l~~~~~~~~~~~~~~~i~ 412 (660)
T PLN02430 333 ALQELNPRRRLIFNALYKYKLAWMNRGYSHKKASPMADFLAFRKVKAKLGGRLRLLISGGAPLSTEIEEFLRVTSCAFVV 412 (660)
T ss_pred HHhccCHHHHHHHHHHHHHHHHHHhcCCCCCCcchhHHHHHHHHHHHHhCCeEEEEEECCCCCCHHHHHHHHHhcCCCee
Confidence 87777888899999999988877765443333445667788999999999999999999999999998877765457899
Q ss_pred EeeccCCCCceeeeecCCcccccCcccccccCeEEEEeecCCCCCCCCCCCCCCeEEEecCCccccccCCchhhhhhhcC
Q 014951 320 QGYGLTESCSGCFTSLADVFNMIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVIVD 399 (415)
Q Consensus 320 ~~yG~tE~~~~~~~~~~~~~~~~~~~G~~~~g~~~~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gY~~~~~~~~~~~~~ 399 (415)
+.||+||+++.++...+......+++|+|.+++++++++.++.+..+.+.++.|||+|+||+++.|||++|+.|.++|.|
T Consensus 413 ~~YG~TE~~~~~~~~~~~~~~~~gsvG~p~~~~evki~d~~~~g~~~~~~~~~GEi~vrg~~v~~GY~~~~e~t~~~~~d 492 (660)
T PLN02430 413 QGYGLTETLGPTTLGFPDEMCMLGTVGAPAVYNELRLEEVPEMGYDPLGEPPRGEICVRGKCLFSGYYKNPELTEEVMKD 492 (660)
T ss_pred eecchhhhhhceEeeccccCCCCCCccCCCCceEEEEEEcCCcCcccCCCCCcceEEecCCCccccccCChHHhhhhhhc
Confidence 99999999887766554444445899999999999998855555455666678999999999999999999999999999
Q ss_pred CceecCceEEEcCCCC
Q 014951 400 GWFHTGDIGEWQPMEL 415 (415)
Q Consensus 400 g~~~TGDlg~~d~~G~ 415 (415)
|||+|||+|++|+||+
T Consensus 493 Gw~~TGDig~~d~dG~ 508 (660)
T PLN02430 493 GWFHTGDIGEILPNGV 508 (660)
T ss_pred cceeccceEEECCCCc
Confidence 9999999999999996
No 7
>PLN02736 long-chain acyl-CoA synthetase
Probab=100.00 E-value=5.5e-60 Score=471.81 Aligned_cols=405 Identities=41% Similarity=0.730 Sum_probs=329.3
Q ss_pred CccCCCCCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEcCCChhhhhhcCccCCCC
Q 014951 1 MRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLY 80 (415)
Q Consensus 1 L~~~Gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~ 80 (415)
|+++|+++||+|+|+++|++||+++++||+++|++++|+++.++++++.+++++++++++|++.+..+.+...... .+.
T Consensus 95 L~~~Gv~~gd~Vai~~~n~~e~~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~~~~~~l~~~~~~~~~~~~~~~~-~~~ 173 (651)
T PLN02736 95 LVQHGIPKGACVGLYFINRPEWLIVDHACSAYSYVSVPLYDTLGPDAVKFIVNHAEVAAIFCVPQTLNTLLSCLSE-IPS 173 (651)
T ss_pred HHHhCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCeEEEeecCCCHHHHHHHHhccCCCEEEECHHHHHHHHHHhhc-CCC
Confidence 4578999999999999999999999999999999999999999999999999999999999998776666554443 255
Q ss_pred ccEEEEecCCCchhhHHhhhcCceeecHHHHHhcCC-CCCCCCCCCCCCeEEEEecCCCCCCCceEEeecHHHHHHhhhh
Q 014951 81 LKTIVSFANVSSSQKKEAEELGVSCFSWEEFLQLGT-LDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSV 159 (415)
Q Consensus 81 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~~~ 159 (415)
++.++..+...................++++..... ......+..++|+++|+|||||||.||||++||+++..++...
T Consensus 174 l~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dd~a~IlyTSGTTG~PKGV~lsh~~l~~~~~~~ 253 (651)
T PLN02736 174 VRLIVVVGGADEPLPSLPSGTGVEIVTYSKLLAQGRSSPQPFRPPKPEDVATICYTSGTTGTPKGVVLTHGNLIANVAGS 253 (651)
T ss_pred ceEEEEECCCchhhhhhhccCCcEEEEHHHHHHhcccCCCCCCCCCccceEEEEEcCCCCCCCcEEEEecHHHHHHHHHH
Confidence 667776643221111111112234567777765432 1222334578999999999999999999999999999988876
Q ss_pred hhhhhhccccCCCCCEEEEeCChhhHHHHHHHHHhhhcCcEEEEeCCCHHHHHHHHHhhCCeEEEeCcHHHHHHHHHHHH
Q 014951 160 DQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRGDVRYLMEDIQELKPTMFSGVPRVYDRIYTGISN 239 (415)
Q Consensus 160 ~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~vv~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~ 239 (415)
...+ .+.++|++++++|++|.+++...+.+++.|+++++.+.++..+++.|++++||+++++|++++.+.+.+..
T Consensus 254 ~~~~-----~~~~~d~~l~~lPl~h~~~~~~~~~~l~~G~~i~~~~~~~~~~~~~i~~~~~t~~~~vP~~~~~l~~~~~~ 328 (651)
T PLN02736 254 SLST-----KFYPSDVHISYLPLAHIYERVNQIVMLHYGVAVGFYQGDNLKLMDDLAALRPTIFCSVPRLYNRIYDGITN 328 (651)
T ss_pred Hhcc-----CCCCCCEEEEeCCHHHHHHHHHHHHHHHcCCEEEEeCCCHHHHHHHHHHhCCcEEecchHHHHHHHHHHHH
Confidence 6555 67789999999999999999888888999999999888899999999999999999999999999998888
Q ss_pred hhhcCChhhHHHHHHHHHhhhhccccCCCCCCccchhhHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHHHhcCCceE
Q 014951 240 KISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLT 319 (415)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~~G~~~~~~~~~~~~~~~~~~~~ 319 (415)
.....+...++++++++..+...+..+. ...+.++.+.+++++..+++++|.+++||+++++++.+++.+.++.+++
T Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~lg~~lr~~~~gGa~l~~~~~~~~~~~~g~~~~ 405 (651)
T PLN02736 329 AVKESGGLKERLFNAAYNAKKQALENGK---NPSPMWDRLVFNKIKAKLGGRVRFMSSGASPLSPDVMEFLRICFGGRVL 405 (651)
T ss_pred HHhcccHHHHHHHHHHHHHHHHHHHcCC---CCCchHHHHHHHHHHHHhcCcEEEEEeCCCCCCHHHHHHHHHHhCCCeE
Confidence 8888888888999988777654443321 1224567778888888888899999999999999999999988999999
Q ss_pred EeeccCCCCceeeeecCCcccccCcccccccCeEEEEeecCCCCC-CCCCCCCCCeEEEecCCccccccCCchhhhhhh-
Q 014951 320 QGYGLTESCSGCFTSLADVFNMIGTVGVPMTTVEARLESVPEMGY-DALSSVPRGEICLRGNTLFSGYYKRPDLTEEVI- 397 (415)
Q Consensus 320 ~~yG~tE~~~~~~~~~~~~~~~~~~~G~~~~g~~~~i~~~~~~~~-~~~~~~~~Gel~v~~~~~~~gY~~~~~~~~~~~- 397 (415)
+.||+||+++.++...... ...+++|+|+||++++|+|.+++.. ....+++.|||+++||+++.|||++|+.|.++|
T Consensus 406 ~~YG~TE~~~~~~~~~~~~-~~~~~vG~p~pg~~v~i~d~~~~~~~~~~~~~~~GEl~vrgp~v~~GY~~~~~~t~~~~~ 484 (651)
T PLN02736 406 EGYGMTETSCVISGMDEGD-NLSGHVGSPNPACEVKLVDVPEMNYTSEDQPYPRGEICVRGPIIFKGYYKDEVQTREVID 484 (651)
T ss_pred EEechHHhchheeccCCCC-CCCCccCCccCceEEEEEEccccCcccCCCCCCCceEEecCCccccccccCHHHHHhhhc
Confidence 9999999987665544433 3458999999999999998333211 011233579999999999999999999999999
Q ss_pred cCCceecCceEEEcCCCC
Q 014951 398 VDGWFHTGDIGEWQPMEL 415 (415)
Q Consensus 398 ~~g~~~TGDlg~~d~~G~ 415 (415)
.||||+|||+|++|+||+
T Consensus 485 ~dgw~~TGDlg~~d~dG~ 502 (651)
T PLN02736 485 EDGWLHTGDIGLWLPGGR 502 (651)
T ss_pred cCCCeeccceEEEcCCCc
Confidence 689999999999999996
No 8
>KOG1180 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=100.00 E-value=7.7e-60 Score=422.35 Aligned_cols=406 Identities=36% Similarity=0.618 Sum_probs=351.2
Q ss_pred CccCCCCCCCe-EEEEcCCcHhHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEcCCChhhhhhcCccCCC
Q 014951 1 MRSRGVNPGDR-CGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCL 79 (415)
Q Consensus 1 L~~~Gv~~gd~-V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~ 79 (415)
|...|++++++ |+|+++.+.+|.++++||++.+.++|.+...+..+.+.+-|+.++++.+|++.+.++.+...++.. .
T Consensus 106 L~~lG~k~~e~k~~iFa~TraeWm~ta~gC~~q~ipvVT~Y~TLGeeal~hsl~Et~~~~i~T~~~LL~kl~~~l~~~-~ 184 (678)
T KOG1180|consen 106 LVKLGLKPKETKIAIFAETRAEWMITAQGCFSQNIPVVTAYATLGEEALIHSLNETESTAIFTDSELLPKLKAPLKQA-K 184 (678)
T ss_pred HHHhCCCCCCCeEEEEecchHHHHHHHHHHHhcCCeEEEEehhcChhhhhhhhccccceEEEeCHHHHHHHHHHHhcc-C
Confidence 45679997776 999999999999999999999999999999999999999999999999999999999777665544 8
Q ss_pred CccEEEEecCCCc----hhhHHhhhcCceeecHHHHHhcCCCC-CCCCCCCCCCeEEEEecCCCCCCCceEEeecHHHHH
Q 014951 80 YLKTIVSFANVSS----SQKKEAEELGVSCFSWEEFLQLGTLD-CELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVA 154 (415)
Q Consensus 80 ~~~~v~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~TSGtTG~pK~v~~th~~l~~ 154 (415)
.++.+|.++..+. +...........+.+|+++.+-+... .+..++.++|+|+|+|||||||.||||+++|.|+++
T Consensus 185 ~vk~II~~d~id~~~~~~~v~~i~~p~i~i~Sf~~v~~lG~~~~~~~~~P~p~Dia~IMYTSGSTG~PKGVml~H~NiVA 264 (678)
T KOG1180|consen 185 TVKHIIYFDPIDYDAAKDDVNSIVRPDIKIISFDDVEKLGKENEIPPHPPKPSDIACIMYTSGSTGLPKGVMLTHSNIVA 264 (678)
T ss_pred ceeEEEEecCCCCccchhhhhhhccCCeEEEEHHHHHhhCCcCCCCCCCCCCCceEEEEEcCCCCCCCceEEEecccHHh
Confidence 8999999995332 11111223467889999999877322 334455889999999999999999999999999999
Q ss_pred HhhhhhhhhhhccccCCCCCEEEEeCChhhHHHHHHHHHhhhcCcEEEEeCC----C-----HHHHHHHHHhhCCeEEEe
Q 014951 155 EVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG----D-----VRYLMEDIQELKPTMFSG 225 (415)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~vv~~~~----~-----~~~~~~~i~~~~~t~~~~ 225 (415)
.+....... ..+.+.|+++.++|+.|++-+.+-+.+++.|+.+-+.+. | ...--..+...+||.|.+
T Consensus 265 ~~~G~~~~v----~~lg~~D~yi~yLPLAHIlEl~aE~~~ft~G~~iGY~S~~TLtdts~ki~kg~kGD~~~lkPTiM~~ 340 (678)
T KOG1180|consen 265 GVTGVGENV----PELGPKDRYIAYLPLAHILELTAELVCFTWGGRIGYSSPLTLTDTSSKIKKGCKGDLTELKPTIMAA 340 (678)
T ss_pred hhhhhcccC----cccCCCceEEEechHHHHHHHHHHHHHHhhCCEeecCCcceecccchhhccCCcCccccccchhhhh
Confidence 998765543 267899999999999999999999999999999988754 1 112223356789999999
Q ss_pred CcHHHHHHHHHHHHhhhcCChhhHHHHHHHHHhhhhccccCCCCCCccchhhHHHHHHHHHHhCCceeEEEEecCCCCHH
Q 014951 226 VPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIH 305 (415)
Q Consensus 226 ~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~~G~~~~~~ 305 (415)
+|++|+++.+....++.+.+...+++|..++..++..++.. ....+.++.+.|+++|..+|.+||.+++||+|++++
T Consensus 341 VpAV~drVrKgVl~kV~~~~~~~k~lF~~aY~~K~~~~~~~---g~~s~~ld~lVFkKIr~~lGG~lR~~LsGGapLS~d 417 (678)
T KOG1180|consen 341 VPAVMDRVRKGVLSKVNAMPGLQKKLFWTAYERKLSLIERN---GPGSPLLDALVFKKIRALLGGNLRYILSGGAPLSPD 417 (678)
T ss_pred hHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHhcc---CCchhhHHHHHHHHHHHHhCCceEEEEeCCCCCCHH
Confidence 99999999999999999999999999999999888887731 233678999999999999999999999999999999
Q ss_pred HHHHHHHhcCCceEEeeccCCCCceeeeecCCcccccCcccccccCeEEEEeecCCCCCCCCCCCCCCeEEEecCCcccc
Q 014951 306 VEEFLRVTSGAPLTQGYGLTESCSGCFTSLADVFNMIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSG 385 (415)
Q Consensus 306 ~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~G~~~~g~~~~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~g 385 (415)
+.+++..++.+++.++||.||+++..+...+....- +.+|.|++.++++++|.+|++..+-..-..|||+++|+++..|
T Consensus 418 tQrF~nic~C~Pv~qGYGLTEtca~~tv~e~~d~~~-g~vG~pl~c~eiKLvdw~EgGY~~~~~PPrGEI~i~G~~vt~g 496 (678)
T KOG1180|consen 418 TQRFMNICFCCPVLQGYGLTETCAAATVLEPEDFST-GRVGAPLPCCEIKLVDWEEGGYFAKNKPPRGEILIGGPNVTMG 496 (678)
T ss_pred HHHHHHHhccccccccccccchhcccEecChhhccc-ccccCCccceEEEEEEhhhcCccCCCCCCCceEEecCCccChh
Confidence 999999999999999999999999888777776666 8999999999999999888887666544689999999999999
Q ss_pred ccCCchhhhhhh--cCC--ceecCceEEEcCCCC
Q 014951 386 YYKRPDLTEEVI--VDG--WFHTGDIGEWQPMEL 415 (415)
Q Consensus 386 Y~~~~~~~~~~~--~~g--~~~TGDlg~~d~~G~ 415 (415)
|++||+.|++.| .|| ||+|||+|++.+||.
T Consensus 497 Y~kn~ekT~e~ft~~~G~~WF~TGDIGe~~pdG~ 530 (678)
T KOG1180|consen 497 YYKNEEKTKEDFTVEDGQRWFRTGDIGEFHPDGC 530 (678)
T ss_pred hhCChhhhhhhceecCCcEEEeccccceecCCCc
Confidence 999999999999 488 999999999999984
No 9
>PLN02387 long-chain-fatty-acid-CoA ligase family protein
Probab=100.00 E-value=5.2e-58 Score=458.74 Aligned_cols=409 Identities=34% Similarity=0.589 Sum_probs=323.7
Q ss_pred CccCCCCCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEcCCChhhhhhcCccCCCC
Q 014951 1 MRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLY 80 (415)
Q Consensus 1 L~~~Gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~ 80 (415)
|.++|+++||+|+|+++|++||+++++||+++|++++||++.++++++.++|+.++++++|++.+....+...... .+.
T Consensus 123 L~~lG~~~gd~Vai~~~n~~e~~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~~~li~~~~~~~~l~~~~~~-~~~ 201 (696)
T PLN02387 123 LVALGHNKEERVAIFADTRAEWLIALQGCFRQNITVVTIYASLGEEALCHSLNETEVTTVICDSKQLKKLIDISSQ-LET 201 (696)
T ss_pred HHHhCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCeEEEecCCCCHHHHHHHHHccCCCEEEECHHHHHHHHHHhhc-cCC
Confidence 4578999999999999999999999999999999999999999999999999999999999998776666554433 256
Q ss_pred ccEEEEecCCCchhhHH-hhhcCceeecHHHHHhcCC-CCCCCCCCCCCCeEEEEecCCCCCCCceEEeecHHHHHHhhh
Q 014951 81 LKTIVSFANVSSSQKKE-AEELGVSCFSWEEFLQLGT-LDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLS 158 (415)
Q Consensus 81 ~~~v~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~~ 158 (415)
++.++.+++........ ..........++++...+. .........++|+++|+|||||||.||||++||+++..++..
T Consensus 202 l~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dd~a~I~yTSGTTG~PKGV~lth~~l~~~~~~ 281 (696)
T PLN02387 202 VKRVIYMDDEGVDSDSSLSGSSNWTVSSFSEVEKLGKENPVDPDLPSPNDIAVIMYTSGSTGLPKGVMMTHGNIVATVAG 281 (696)
T ss_pred ceEEEEECCCCchhhhhhhccCCcEEEEHHHHHHhhccCCCCCCCCCccceEEEEecCCCCCCCCEEEEEcHHHHHHHHH
Confidence 77888886543211100 0112234556777765442 122223456899999999999999999999999999988876
Q ss_pred hhhhhhhccccCCCCCEEEEeCChhhHHHHHHHHHhhhcCcEEEEeCC----C-----HHHHHHHHHhhCCeEEEeCcHH
Q 014951 159 VDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG----D-----VRYLMEDIQELKPTMFSGVPRV 229 (415)
Q Consensus 159 ~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~vv~~~~----~-----~~~~~~~i~~~~~t~~~~~P~~ 229 (415)
....+ ..+..+|++++++|++|++++...+.++..|+++.+... + +..++..+++++||++.++|.+
T Consensus 282 ~~~~~----~~~~~~d~~l~~lPl~Hi~~~~~~~~~~~~g~~i~~g~~~~l~~~~~~~~~~~~~~i~~~~pT~~~~vP~~ 357 (696)
T PLN02387 282 VMTVV----PKLGKNDVYLAYLPLAHILELAAESVMAAVGAAIGYGSPLTLTDTSNKIKKGTKGDASALKPTLMTAVPAI 357 (696)
T ss_pred HHhhc----CCCCCCCEEEEECcHHHHHHHHHHHHHHHhCCEEEECChhhhcccccccccCchhhHHHhCCcEEEehhHH
Confidence 54332 146789999999999999998876666777777765332 1 2345678999999999999999
Q ss_pred HHHHHHHHHHhhhcCChhhHHHHHHHHHhhhhccccCC--CCCCccchhhHHHHHHHHHHhCCceeEEEEecCCCCHHHH
Q 014951 230 YDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMKKGM--PQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVE 307 (415)
Q Consensus 230 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~~G~~~~~~~~ 307 (415)
++.+.+.............+++|++++..++...+... .....+..++.+.+++++..+|+++|.+++||+|+++++.
T Consensus 358 l~~l~~~~~~~~~~~~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~lr~i~~GGapl~~~~~ 437 (696)
T PLN02387 358 LDRVRDGVRKKVDAKGGLAKKLFDIAYKRRLAAIEGSWFGAWGLEKLLWDALVFKKIRAVLGGRIRFMLSGGAPLSGDTQ 437 (696)
T ss_pred HHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHhccCCcccccccchhhHHHHHHHHHHHhCCcEEEEEEcCCCCCHHHH
Confidence 99999988777777788889999999887765543211 1123455778889999999999999999999999999999
Q ss_pred HHHHHhcCCceEEeeccCCCCceeeeecCCcccccCcccccccCeEEEEeecCCCCCCCC-CCCCCCeEEEecCCccccc
Q 014951 308 EFLRVTSGAPLTQGYGLTESCSGCFTSLADVFNMIGTVGVPMTTVEARLESVPEMGYDAL-SSVPRGEICLRGNTLFSGY 386 (415)
Q Consensus 308 ~~~~~~~~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~G~~~~g~~~~i~~~~~~~~~~~-~~~~~Gel~v~~~~~~~gY 386 (415)
++++..+++++++.||+||+++.++....+.. ..+++|+|+|+++++|+|.++++.... .+++.|||+|+||+++.||
T Consensus 438 ~~~~~~~g~~v~~~YG~TEt~~~~~~~~~~~~-~~gsvG~p~p~~evkivd~~~~~~~~~~~~~p~GEi~vrGp~v~~GY 516 (696)
T PLN02387 438 RFINICLGAPIGQGYGLTETCAGATFSEWDDT-SVGRVGPPLPCCYVKLVSWEEGGYLISDKPMPRGEIVIGGPSVTLGY 516 (696)
T ss_pred HHHHHHcCCCeeEeechhhcccceeecCcccC-CCCccCCCCCceEEEEeeccccCcccCCCCCCCceEEeccCcccchh
Confidence 99988889999999999999877665544333 348999999999999998555543221 2345799999999999999
Q ss_pred cCCchhhhhhhc---CC--ceecCceEEEcCCCC
Q 014951 387 YKRPDLTEEVIV---DG--WFHTGDIGEWQPMEL 415 (415)
Q Consensus 387 ~~~~~~~~~~~~---~g--~~~TGDlg~~d~~G~ 415 (415)
|++|+.|.++|. +| ||+|||+|++|+||+
T Consensus 517 ~~~pe~T~~~f~~d~~G~~W~~TGDig~~d~dG~ 550 (696)
T PLN02387 517 FKNQEKTDEVYKVDERGMRWFYTGDIGQFHPDGC 550 (696)
T ss_pred cCCHHHHhhhhccccCCCceeecCceEEECCCCc
Confidence 999999999982 35 999999999999996
No 10
>KOG1176 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=100.00 E-value=7.6e-59 Score=437.37 Aligned_cols=351 Identities=28% Similarity=0.443 Sum_probs=285.0
Q ss_pred CCCCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEcCCChhhhhhcCccCCCCccEE
Q 014951 5 GVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTI 84 (415)
Q Consensus 5 Gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~v 84 (415)
|+++||+|++++||+++++++++||+.+|++..+++|.+.+.++.++++.++++++|++.+..+.+........ ..+
T Consensus 68 ~i~~gDvV~i~~pNs~~~~~~~la~~~~Ga~~~~~Np~~~~~ei~~~~~~s~~kiif~d~~~~~~i~~~~~~~~---~~i 144 (537)
T KOG1176|consen 68 GIKKGDVVGILAPNTPEFVELALAVPMAGAVLNPLNPRLTASEIAKQLKDSKPKLIFVDEDFYDKISEATSKLA---LKI 144 (537)
T ss_pred CCCCCCEEEEEcCCCHHHHHHHHHHHHcCccccccCcccCHHHHHHHHHhcCCeEEEEcCchHHHHHHHHhhcC---Cce
Confidence 58999999999999999999999999999999999999999999999999999999999999988876654321 344
Q ss_pred EEecCCCchhhHHhhhcCceeec-HHHHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEeecHHHHHHhhhhhhhh
Q 014951 85 VSFANVSSSQKKEAEELGVSCFS-WEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMF 163 (415)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~~~~~~~ 163 (415)
+.+........ ......... +..+...+.... ..+...+|++.+.|||||||.||||++||++++.+........
T Consensus 145 ~~l~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~-~~~~~~dd~~~il~SSGTTg~PKgV~lsHr~~~~~~~~~~~~~ 220 (537)
T KOG1176|consen 145 IVLTGDEGVIS---ISDLVEDLDAFEDLMPEGLPDG-IRPVSEDDTAAILYSSGTTGLPKGVVLSHRNLIANTLSIKIGW 220 (537)
T ss_pred EEEecccCccc---cccccccccchhhccccCCCcc-cccCCCCCeEEEecCCCCCCCCceEEEecHHHHHHHHHhhhcc
Confidence 44433210000 000011112 444444332222 5667789999999999999999999999999998877643332
Q ss_pred hhccccCCCCCEEEEeCChhhHHHHHHHHH-hhhcCcEEEEeCC-CHHHHHHHHHhhCCeEEEeCcHHHHHHHHHHHHhh
Q 014951 164 VVTGKVCSEEDTYFSFLPLAHIYDQIIETH-CIHKGCSIGFWRG-DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKI 241 (415)
Q Consensus 164 ~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~-~l~~G~~vv~~~~-~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~ 241 (415)
.....|+.++.+|++|.+|+...+. .+..|+++++.+. ++..+++.|++|++|++.++|.++..+++.
T Consensus 221 -----~~~~~~v~l~~lPl~H~~Gl~~~~~~~~~~~~~ii~~~~f~~~~~~~~i~kykvt~~~~vP~~~~~l~~~----- 290 (537)
T KOG1176|consen 221 -----ELTSDDVYLCTLPLFHIYGLITLLLSLLAGGTTIICLRKFDAELFLDLIEKYKVTHLFLVPPVLNMLAKS----- 290 (537)
T ss_pred -----cCCCCceEEEechHHHHhHHHHHHHHHHhCCceEEECCCCCHHHHHHHHHHhCEEEEEcChHHHHHHhcC-----
Confidence 6667999999999999999998776 5666666777766 999999999999999999999999998762
Q ss_pred hcCChhhHHHHHHHHHhhhhccccCCCCCCccchhhHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHHHhcC-CceEE
Q 014951 242 SSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSG-APLTQ 320 (415)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~~G~~~~~~~~~~~~~~~~-~~~~~ 320 (415)
+.....++ +++|.+.+||+++++++.+++++.++ ..+.+
T Consensus 291 --------------------------------p~~~~~~l--------~sl~~v~~gga~~~~~~~~~~~~~l~~~~v~q 330 (537)
T KOG1176|consen 291 --------------------------------PIVKKYDL--------SSLRSVLSGGAPLSPATLEKVKERLPNVTVIQ 330 (537)
T ss_pred --------------------------------CccCcccC--------CccEEEEecCCCCCHHHHHHHHHhCCCceEEE
Confidence 11222222 48999999999999999999999998 89999
Q ss_pred eeccCCCCceeeeecCCcccccCcccccccCeEEEEeecCCCCCCCCCCCCCCeEEEecCCccccccCCchhhhhhhcC-
Q 014951 321 GYGLTESCSGCFTSLADVFNMIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVIVD- 399 (415)
Q Consensus 321 ~yG~tE~~~~~~~~~~~~~~~~~~~G~~~~g~~~~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gY~~~~~~~~~~~~~- 399 (415)
.||+||+++.++.+......+++++|+++++++.+|.+ +.| ..+++++.||||++|+.+++||++||++|++.|.+
T Consensus 331 ~YGmTE~~~~~~~~~~~~e~k~~svG~~~~g~~~~v~~-e~g--~~l~~~~~GEI~vrg~~imkGY~~NpeaT~~~~~~~ 407 (537)
T KOG1176|consen 331 GYGMTEAGGLITSNDWGPERKPGSVGRLLPGVRVKVLD-ETG--VSLGPNQTGEICVRGPQVMKGYLKNPEATKEAFDDD 407 (537)
T ss_pred eeccccccCceeecCCCccCcccccCccccceEEEeeC-CCC--CCCCCCCceEEEEECcccchhhcCChHHHHhhcccC
Confidence 99999999776665544435679999999999999888 665 45566799999999999999999999999999955
Q ss_pred CceecCceEEEcCCCC
Q 014951 400 GWFHTGDIGEWQPMEL 415 (415)
Q Consensus 400 g~~~TGDlg~~d~~G~ 415 (415)
|||+|||+|++|+|||
T Consensus 408 GW~~TGDiGy~D~DG~ 423 (537)
T KOG1176|consen 408 GWFHTGDLGYFDEDGY 423 (537)
T ss_pred CccccCceEEEcCCCe
Confidence 9999999999999997
No 11
>PTZ00216 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=5.3e-57 Score=452.54 Aligned_cols=402 Identities=32% Similarity=0.567 Sum_probs=316.0
Q ss_pred CccCCCCCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEcCCChhhhhhcCccCCCC
Q 014951 1 MRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLY 80 (415)
Q Consensus 1 L~~~Gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~ 80 (415)
|++.|+++||+|+|+++|++||+++++||+++|++++|+++.++++++.+++++++++++|++.+....+..........
T Consensus 138 L~~~Gv~~gd~V~i~~~n~~e~~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~~~lv~~~~~~~~l~~~~~~~~~~ 217 (700)
T PTZ00216 138 LAELGLTKGSNVAIYEETRWEWLASIYGIWSQSMVAATVYANLGEDALAYALRETECKAIVCNGKNVPNLLRLMKSGGMP 217 (700)
T ss_pred HHHhCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCeEEeeCCCCCHHHHHhhhhccCccEEEECHHHHHHHHHhhhhccCC
Confidence 45789999999999999999999999999999999999999999999999999999999999877655544333211111
Q ss_pred ccEEEEecCCCchhhHHhhhcCceeecHHHHHhcCC--C--CCCCCCCCCCCeEEEEecCCCCCCCceEEeecHHHHHHh
Q 014951 81 LKTIVSFANVSSSQKKEAEELGVSCFSWEEFLQLGT--L--DCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEV 156 (415)
Q Consensus 81 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~--~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~ 156 (415)
...++.++..... .........+|+++...+. . .....+..++|+++|+|||||||.||||++||+++.+.+
T Consensus 218 ~~~ii~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~iiyTSGTTG~PKGV~lth~nl~~~~ 293 (700)
T PTZ00216 218 NTTIIYLDSLPAS----VDTEGCRLVAWTDVVAKGHSAGSHHPLNIPENNDDLALIMYTSGTTGDPKGVMHTHGSLTAGI 293 (700)
T ss_pred ceEEEEECCCccc----cccCCceEEEHHHHHHhCCccccccccCCCCCcccEEEEEEeCCCCCcCcEEEEEhHHHHHHH
Confidence 2245555442211 0112334567877765441 1 111234468999999999999999999999999999887
Q ss_pred hhhhhhhhhccccCCCCCEEEEeCChhhHHHHHHHHHhhhcCcEEEEeCCCHHHHHH-------HHHhhCCeEEEeCcHH
Q 014951 157 LSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRGDVRYLME-------DIQELKPTMFSGVPRV 229 (415)
Q Consensus 157 ~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~vv~~~~~~~~~~~-------~i~~~~~t~~~~~P~~ 229 (415)
......+......+.++|++++++|++|.++.......+..|+.+.+. ++..+.+ .+++++||++.++|.+
T Consensus 294 ~~~~~~~~~~~~~~~~~d~~ls~lPl~H~~~~~~~~~~l~~G~~v~~~--~~~~l~~~~~~~~~~l~~~~pT~~~~vP~~ 371 (700)
T PTZ00216 294 LALEDRLNDLIGPPEEDETYCSYLPLAHIMEFGVTNIFLARGALIGFG--SPRTLTDTFARPHGDLTEFRPVFLIGVPRI 371 (700)
T ss_pred HHHHhhcccccCCCCCCCEEEEEChHHHHHHHHHHHHHHHcCCEEEEC--CHHHhhhhhccccchHHHcCCcEEEechHH
Confidence 765433211111236789999999999999987666667888877663 4555554 6889999999999999
Q ss_pred HHHHHHHHHHhhhcCChhhHHHHHHHHHhhhhccccCCCCCCccchhhHHHHHHHHHHhCCceeEEEEecCCCCHHHHHH
Q 014951 230 YDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEF 309 (415)
Q Consensus 230 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~~G~~~~~~~~~~ 309 (415)
++.+.+.........+...+++|++++..++.....+. ..+.++.+.+++++..+++++|.+++||+++++++.++
T Consensus 372 ~~~l~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~----~~~~~~~~v~~~~~~~~g~~lr~i~~GGa~l~~~~~~~ 447 (700)
T PTZ00216 372 FDTIKKAVEAKLPPVGSLKRRVFDHAYQSRLRALKEGK----DTPYWNEKVFSAPRAVLGGRVRAMLSGGGPLSAATQEF 447 (700)
T ss_pred HHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHcCC----CCchHHHHHHHHHHHHhCCcEEEEEECCCCCCHHHHHH
Confidence 99999988887777788888999999887766554332 23457788889999999999999999999999999999
Q ss_pred HHHhcCCceEEeeccCCCCceeeeecCCcccccCcccccccCeEEEEeecCCCCCCCCCCCCCCeEEEecCCccccccCC
Q 014951 310 LRVTSGAPLTQGYGLTESCSGCFTSLADVFNMIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKR 389 (415)
Q Consensus 310 ~~~~~~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~G~~~~g~~~~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gY~~~ 389 (415)
++..++ ++++.||+||+++.++....... ..+++|+|++|++++|+| +++......+++.|||+|+||+++.|||++
T Consensus 448 ~~~~~~-~l~~~YG~TEt~~~~~~~~~~~~-~~~svG~p~~g~evkI~d-~~~~~~~~~~~~~GEL~vrG~~v~~GY~~~ 524 (700)
T PTZ00216 448 VNVVFG-MVIQGWGLTETVCCGGIQRTGDL-EPNAVGQLLKGVEMKLLD-TEEYKHTDTPEPRGEILLRGPFLFKGYYKQ 524 (700)
T ss_pred HHHHhh-hHhhccCcccccccccccCCCCC-CCCCcCCcCCCeEEEEee-chhhccCCCCCCCceEEEcCCcccchhcCC
Confidence 988778 99999999999876655443322 348999999999999999 544333344556899999999999999999
Q ss_pred chhhhhhh-cCCceecCceEEEcCCCC
Q 014951 390 PDLTEEVI-VDGWFHTGDIGEWQPMEL 415 (415)
Q Consensus 390 ~~~~~~~~-~~g~~~TGDlg~~d~~G~ 415 (415)
|+.|.++| .+|||+|||+|++|+||+
T Consensus 525 pe~T~~~f~~dGw~~TGDig~~d~dG~ 551 (700)
T PTZ00216 525 EELTREVLDEDGWFHTGDVGSIAANGT 551 (700)
T ss_pred hhHhhhhccccCCeeccceEEEcCCCc
Confidence 99999999 789999999999999995
No 12
>KOG1177 consensus Long chain fatty acid acyl-CoA ligase [Lipid transport and metabolism]
Probab=100.00 E-value=9.9e-56 Score=389.70 Aligned_cols=353 Identities=23% Similarity=0.348 Sum_probs=293.9
Q ss_pred CccCCCCCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEcCCCh-----hhhhhcCc
Q 014951 1 MRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKI-----PSILSCLP 75 (415)
Q Consensus 1 L~~~Gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~-----~~~~~~~~ 75 (415)
|.+.|+++||||++..||+.+|++.+|||+++|.+.+++||++..+++++.|+..+++++|+-..+. +.++++.+
T Consensus 94 ll~lGL~kGDrVgvwgpN~~~w~l~~lA~A~AG~v~v~~NP~Yq~~elr~~L~k~~~k~l~~p~~~k~~ny~~~l~~icP 173 (596)
T KOG1177|consen 94 LLSLGLKKGDRVGVWGPNSYEWVLCQLACARAGLVLVNLNPAYQSEELRYVLKKVGCKALFAPPQFKTQNYYETLLEICP 173 (596)
T ss_pred HHhhcCCCCCEEEEecCChHHHHHHHHHHHHhceEEeccCcccccHHHHHHHhhcCeEEEEccchhhhchHHHHHHHhhH
Confidence 4678999999999999999999999999999999999999999999999999999999999986532 22333222
Q ss_pred ------------cCCCCccEEEEecCCCchhhHHhhhcCceeecHHHHHhcCCC------CCCCCCCCCCCeEEEEecCC
Q 014951 76 ------------RCCLYLKTIVSFANVSSSQKKEAEELGVSCFSWEEFLQLGTL------DCELPPKKKTNISTIMYTSG 137 (415)
Q Consensus 76 ------------~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~i~~TSG 137 (415)
+.++.++.++..++... ..+.+.+.+++..... ........|+|++.|.||||
T Consensus 174 Ev~~~~~G~lkS~~lp~lthvi~~~ed~~---------~~Ga~~~sev~~~~s~~~~a~l~~~~k~~~pdd~~niQFTSG 244 (596)
T KOG1177|consen 174 EVMRGDPGQLKSELLPELTHVILADEDHP---------LPGAFLLSEVLKAASKEERAKLADMSKWLSPDDAVNIQFTSG 244 (596)
T ss_pred HhhcCCCccccccccccceEEEecCCCCc---------CCCceehHHHHHhcchHHHHHHHhhhhhcCCCCceEEEeccC
Confidence 22356677777763321 1234556666544321 12234557899999999999
Q ss_pred CCCCCceEEeecHHHHHHhhhhhhhhhhccccCCCCCEEEEeCChhhHHHHHH-HHHhhhcCcEEEEeCC--CHHHHHHH
Q 014951 138 TTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQII-ETHCIHKGCSIGFWRG--DVRYLMED 214 (415)
Q Consensus 138 tTG~pK~v~~th~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~-~~~~l~~G~~vv~~~~--~~~~~~~~ 214 (415)
|||.|||+.+||.+++++.......+ .+.+.+++++..|++|.+|... +++++..|++++++.. ++...++.
T Consensus 245 TTG~PKgatLsH~~~~Nna~~vg~r~-----g~~e~~~i~~~~Pl~H~~G~~~~~ma~l~~gat~Vfp~~~f~~k~alqa 319 (596)
T KOG1177|consen 245 TTGAPKGATLSHYNFLNNARAVGARA-----GYNEKHRICIPNPLYHCFGCVLGVMAALMHGATIVFPAPSFDPKDALQA 319 (596)
T ss_pred CCCCCcceeeehhhhhhhHHHHHHHh-----CcCcceEEEecCchHHHHHHHHHHHHHHHhCcEEEeeCCCCChHHHHHH
Confidence 99999999999999999999888777 7778889999999999999765 8889999999999765 99999999
Q ss_pred HHhhCCeEEEeCcHHHHHHHHHHHHhhhcCChhhHHHHHHHHHhhhhccccCCCCCCccchhhHHHHHHHHHHhCCceeE
Q 014951 215 IQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQA 294 (415)
Q Consensus 215 i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~ 294 (415)
|+++++|.++++|+++..+++. +.....++ +++|.
T Consensus 320 i~~ekcT~l~gtPtM~~Dlln~-------------------------------------~~~~~~~~--------s~lr~ 354 (596)
T KOG1177|consen 320 ISNEKCTTLYGTPTMFVDLLNI-------------------------------------PQKQQVDL--------SSLRK 354 (596)
T ss_pred HHhhceEEEecChHHHHHHhcc-------------------------------------hhhccCch--------hhhhh
Confidence 9999999999999999998762 11222223 37899
Q ss_pred EEEecCCCCHHHHHHHHHhcCC-ceEEeeccCCCCceeeeecCCcc--cccCcccccccCeEEEEeecCCCCCCCCCCCC
Q 014951 295 MLSGAAPLPIHVEEFLRVTSGA-PLTQGYGLTESCSGCFTSLADVF--NMIGTVGVPMTTVEARLESVPEMGYDALSSVP 371 (415)
Q Consensus 295 v~~~G~~~~~~~~~~~~~~~~~-~~~~~yG~tE~~~~~~~~~~~~~--~~~~~~G~~~~g~~~~i~~~~~~~~~~~~~~~ 371 (415)
++.||+|+++++++.+.+..+. .+.-.||+||++.+.+.+..++. .+..++|..+++.+.+|+| .++..++.+ .
T Consensus 355 ~vigGa~~s~eLlk~iv~~~~m~~i~v~YG~TEts~v~~~~~~~D~~~~~~ksVG~~m~h~Ea~iv~-~~g~~v~~~--~ 431 (596)
T KOG1177|consen 355 GVIGGAPVSPELLKLIVNQMNMKDIAVAYGLTETSPVLFMSLLGDPPEERIKSVGHLMDHYEAAIVD-KDGSEVPLG--T 431 (596)
T ss_pred heeCCCCCCHHHHHHHHHhhCceeeEEEeeccccCcceeeecCCCCHHHHHhhhhhccccccccccc-CCCCccccC--C
Confidence 9999999999999999887776 57778999999998887766554 3468999999999999999 788766665 7
Q ss_pred CCeEEEecCCccccccCCchhhhhhh-cCCceecCceEEEcCCCC
Q 014951 372 RGEICLRGNTLFSGYYKRPDLTEEVI-VDGWFHTGDIGEWQPMEL 415 (415)
Q Consensus 372 ~Gel~v~~~~~~~gY~~~~~~~~~~~-~~g~~~TGDlg~~d~~G~ 415 (415)
.||||+||++++.|||++++.|+++. .|+||+|||+|.+|++|+
T Consensus 432 ~Gel~iRGY~tMl~Ywg~~~kT~eti~~drW~~TGDi~~m~enG~ 476 (596)
T KOG1177|consen 432 KGELLIRGYSTMLGYWGEEEKTKETIGNDRWYDTGDIAVMDENGT 476 (596)
T ss_pred CceEEEEechhheeecCCcccchhhcccccceecCceEEEcCCCc
Confidence 89999999999999999999999988 899999999999999995
No 13
>COG0318 CaiC Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=7.2e-55 Score=423.98 Aligned_cols=352 Identities=29% Similarity=0.471 Sum_probs=282.1
Q ss_pred CccCCCCCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEcCCChhhhhhcCccCCCC
Q 014951 1 MRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLY 80 (415)
Q Consensus 1 L~~~Gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~ 80 (415)
|++.||++||+|+|+++|++++++++|||+++|++++||+|.+..+++.++++.++++.++++.+..+......... +.
T Consensus 55 L~~~~v~~gdrVail~~N~~e~~~~~~a~~~~Gav~vpln~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 133 (534)
T COG0318 55 LQALGVKPGDRVAILLPNSPEFLIAFLAALRAGAVAVPLNPRLTPRELAYILNDAGAKVLITSAEFAALLEAVAEAL-PV 133 (534)
T ss_pred HHHcCCCCCCEEEEECCCCHHHHHHHHHHHhcCEEEeecCcccCHHHHHHHHHhcCCeEEEEcccchhHHHHHhccC-Cc
Confidence 35668999999999999999999999999999999999999999999999999999999999988544444433221 22
Q ss_pred ccEEEEecCCCchhhHHhhhcCceeecHHHHHhcC-CCCCCCCCCCCCCeEEEEecCCCCCCCceEEeecHHHHHHhhhh
Q 014951 81 LKTIVSFANVSSSQKKEAEELGVSCFSWEEFLQLG-TLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSV 159 (415)
Q Consensus 81 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~~~ 159 (415)
...+.......... ...+++..... ..........++|+++++|||||||.||||++||+++..+....
T Consensus 134 ~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~yTSGTTG~PKgv~~th~~~~~~~~~~ 203 (534)
T COG0318 134 VLVVLLVGDADDRL----------PITLEALAAEGPGPDADARPVDPDDLAFLLYTSGTTGLPKGVVLTHRNLLANAAGI 203 (534)
T ss_pred ceEEEecccccccc----------cccHHHHhhccCCcccccCCCCCCCEEEEEeCCCCCCCCCEeEEecHhHHHHHHHH
Confidence 22222222111000 02345553322 11122223678999999999999999999999999999998887
Q ss_pred hhhhhhcccc--CCCCCEEEEeCChhhHHHHHHHH-HhhhcCcEEEEeC---CCHHHHHHHHHhhCCeEEEeCcHHHHHH
Q 014951 160 DQMFVVTGKV--CSEEDTYFSFLPLAHIYDQIIET-HCIHKGCSIGFWR---GDVRYLMEDIQELKPTMFSGVPRVYDRI 233 (415)
Q Consensus 160 ~~~~~~~~~~--~~~~d~~l~~~p~~~~~~~~~~~-~~l~~G~~vv~~~---~~~~~~~~~i~~~~~t~~~~~P~~~~~l 233 (415)
...+ . ++..|++++++|++|.+|+...+ ..++.|+++++.+ +++..++..+.++++|++.++|+++..+
T Consensus 204 ~~~~-----~~~~~~~d~~l~~lPl~H~~Gl~~~~~~~~~~G~~~v~~~~~~f~~~~~~~~i~~~~~t~~~~vPt~~~~l 278 (534)
T COG0318 204 AAAL-----GGGLTPDDVVLSWLPLFHIFGLIVGLLAPLLGGGTLVLLSPEPFDPEEVLWLIEKYKVTVLSGVPTFLREL 278 (534)
T ss_pred HHHh-----cccCCCCceEEEecChHHHHHHHHHHHHHHHcCCEEEeCCCCCcCHHHHHHHHHHhcceEEecchHHHHHH
Confidence 7666 5 78999999999999999999755 5599999999987 4999999999999999999999999997
Q ss_pred HHHHHHhhhcCChhhHHHHHHHHHhhhhccccCCCCCCccchhhHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHHHh
Q 014951 234 YTGISNKISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVT 313 (415)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~~G~~~~~~~~~~~~~~ 313 (415)
+++... ...++. +++|.+++||+++++++.+.+++.
T Consensus 279 l~~~~~-------------------------------------~~~~~~-------~~lr~~~~gg~~~~~~~~~~~~~~ 314 (534)
T COG0318 279 LDNPEK-------------------------------------DDDDLS-------SSLRLVLSGGAPLPPELLERFEER 314 (534)
T ss_pred HhCCcc-------------------------------------Cccccc-------cceEEEEecCCcCCHHHHHHHHHH
Confidence 662211 110111 139999999999999999999999
Q ss_pred cC-CceEEeeccCCCCceeeeecCCc-ccccCcccccccCeEEEEeecCCCCCCCCCCCCCCeEEEecCCccccccCCch
Q 014951 314 SG-APLTQGYGLTESCSGCFTSLADV-FNMIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPD 391 (415)
Q Consensus 314 ~~-~~~~~~yG~tE~~~~~~~~~~~~-~~~~~~~G~~~~g~~~~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gY~~~~~ 391 (415)
++ ..+.+.||+||++..++....+. ....+++|+|+||++++|+| ++++ .+.+ |+.|||+++||+++.|||++|+
T Consensus 315 ~~~~~i~~~YG~TE~~~~~~~~~~~~~~~~~~~~G~~~pg~~v~Ivd-~~~~-~~~p-g~vGei~irgp~v~~GY~~~pe 391 (534)
T COG0318 315 FGPIAILEGYGLTETSPVVTINPPDDLLAKPGSVGRPLPGVEVRIVD-PDGG-EVLP-GEVGEIWVRGPNVMKGYWNRPE 391 (534)
T ss_pred hCCCceEEeecccccCceeecCCCchhhhcCCcccccCCCcEEEEEe-CCCC-ccCC-CCceEEEEECchhhhhhcCChH
Confidence 98 57999999999998777766665 23457889999999999999 6665 2333 7899999999999999999999
Q ss_pred hhhhhhcC-CceecCceEEEcCCCC
Q 014951 392 LTEEVIVD-GWFHTGDIGEWQPMEL 415 (415)
Q Consensus 392 ~~~~~~~~-g~~~TGDlg~~d~~G~ 415 (415)
.|.+.|.+ |||+|||+|++|+||+
T Consensus 392 ~t~~~f~~~gW~~TGDlg~~d~~G~ 416 (534)
T COG0318 392 ATAEAFDEDGWLRTGDLGYVDEDGY 416 (534)
T ss_pred HHHHhhccCCeeeecceEEEcCCcc
Confidence 99998875 9999999999999986
No 14
>COG0365 Acs Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases [Lipid metabolism]
Probab=100.00 E-value=1.4e-54 Score=406.25 Aligned_cols=342 Identities=22% Similarity=0.291 Sum_probs=278.5
Q ss_pred CCCCCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEcCCChhhhhhcC--ccCCCCc
Q 014951 4 RGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCL--PRCCLYL 81 (415)
Q Consensus 4 ~Gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~--~~~~~~~ 81 (415)
.|+ +||||++++|+.+|.++++|||+++|++.+|+.+.++++++..+++++++|++|+++....+..... .......
T Consensus 61 ~gv-kGDrV~iymp~~pe~~~a~LA~~riGAI~~~vf~~f~~~al~~Ri~d~~~k~vit~d~~~~~gk~~~~~~~~~~~~ 139 (528)
T COG0365 61 GGV-KGDRVAIYMPNSPEAVIALLATARIGAIPAVVSPGLSAEAVADRIADLGPKVLIADDGTFRNGKEIALLEDADAVL 139 (528)
T ss_pred CCC-CCCEEEEEcCCCHHHHHHHHHHHHcCCEEeecccCCCHHHHHHHHHccCCCEEEEecccccccccccchhHHHHhh
Confidence 568 9999999999999999999999999999999999999999999999999999999987654332211 0000001
Q ss_pred cEEEEecCCCchhhHHhhhcCceeecHHHHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEeecHHHHHHhhhhhh
Q 014951 82 KTIVSFANVSSSQKKEAEELGVSCFSWEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQ 161 (415)
Q Consensus 82 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~~~~~ 161 (415)
..+++..... ..|.+.........+..+.+.+|+++++|||||||.||||+++|..++........
T Consensus 140 ~~~iv~~r~~--------------~~~~~~~~~~~~~~~~~~~~~~dpl~ilYTSGTTG~PKgv~H~~gg~l~~~~~~~~ 205 (528)
T COG0365 140 SSVVVVPRLG--------------LWYDEAVEKASEKFEFEPLPADDPLFLLYTSGTTGKPKGIVHSHGGYLVEHRLTAK 205 (528)
T ss_pred cceEEecccc--------------ccHHHHhhccCCCCCccccCCCCeEEEEeCCCCCCCCceEEEeCchHHHHHHHHHH
Confidence 1133333221 56677766554444455689999999999999999999999999987777655433
Q ss_pred hhhhccccCCCCCEEEEeCChhhHHHHHH-HHHhhhcCcEEEEeCC----CHHHHHHHHHhhCCeEEEeCcHHHHHHHHH
Q 014951 162 MFVVTGKVCSEEDTYFSFLPLAHIYDQII-ETHCIHKGCSIGFWRG----DVRYLMEDIQELKPTMFSGVPRVYDRIYTG 236 (415)
Q Consensus 162 ~~~~~~~~~~~~d~~l~~~p~~~~~~~~~-~~~~l~~G~~vv~~~~----~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~ 236 (415)
.. ..+.++|++++..++.|.+|... ++.++..|+++++.+. ++..+++.|+++++|.+++.|+.+++|.+.
T Consensus 206 ~~----~~~~~~Dv~w~~ad~GW~~g~~~~v~~pL~~Gat~~~~eg~p~~~~~~~~~~ie~~~vt~~~tsPT~~R~l~~~ 281 (528)
T COG0365 206 FH----GDLLPGDRFWNSSDPGWIYGLWYSVFSPLASGATTVLYDGRPFYSPERLWEALEKYKVTIFGTSPTFLRRLMKL 281 (528)
T ss_pred Hh----hCCCCCCEEEeCCCchhhhCchHHHHHHHhcCCeEEEeCCCCCCCHHHHHHHHHHhCCceEeeCHHHHHHHHhc
Confidence 21 26679999999999999999997 8899999999999876 389999999999999999999999998761
Q ss_pred HHHhhhcCChhhHHHHHHHHHhhhhccccCCCCCCccchhhHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHHHhcCC
Q 014951 237 ISNKISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGA 316 (415)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~~G~~~~~~~~~~~~~~~~~ 316 (415)
-. .++.++ ++||.+.++|||++++..+|+.+.+|+
T Consensus 282 g~-------------------------------------~~~~dl--------ssLr~~~SaGEPLnpe~~~w~~~~~g~ 316 (528)
T COG0365 282 GL-------------------------------------GEPYDL--------SSLRVLGSAGEPLNPEAFEWFYSALGV 316 (528)
T ss_pred CC-------------------------------------cccccc--------hhheeeeccCCCCCHHHHHHHHHHhCC
Confidence 11 222233 489999999999999999999999999
Q ss_pred ceEEeeccCCCCceeeeecCCcccccCcccccccCeEEEEeecCCCCCCCCCCCCCCeEEEecC--CccccccCCchhhh
Q 014951 317 PLTQGYGLTESCSGCFTSLADVFNMIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGN--TLFSGYYKRPDLTE 394 (415)
Q Consensus 317 ~~~~~yG~tE~~~~~~~~~~~~~~~~~~~G~~~~g~~~~i~~~~~~~~~~~~~~~~Gel~v~~~--~~~~gY~~~~~~~~ 394 (415)
+|.+.||+||+++......+ ..+. ++.|.|+||.++.|+| ++++ ++++++ |+|.++.| +++++||+||+.+.
T Consensus 317 ~i~d~~gqTEtg~~~~~~~~-~~~~-g~~g~p~pG~~~~vvd-d~g~--~~~~~~-G~Lvi~~~~p~~~~~~w~d~er~~ 390 (528)
T COG0365 317 WILDIYGQTETGMGFIAGRP-PVKN-GSSGLPLPGYAVRRVD-DEGN--PVPPGV-GELVVRLPWPGMALTYWNDPERYK 390 (528)
T ss_pred CEeccccccccCccccCCCC-CcCC-CCCCCCCCCceeEEEC-CCCC--cCCCCc-eEEEEeCCCchhhhhhhCCHHHHH
Confidence 99999999999965555444 3334 5559999999999999 7754 444457 99999987 99999999999999
Q ss_pred hhhcCCceecCceEEEcCCCC
Q 014951 395 EVIVDGWFHTGDIGEWQPMEL 415 (415)
Q Consensus 395 ~~~~~g~~~TGDlg~~d~~G~ 415 (415)
++|.++||.|||.+++|+|||
T Consensus 391 ~~y~~~~y~tGD~~~~DedGy 411 (528)
T COG0365 391 EAYFGRWYRTGDWAERDEDGY 411 (528)
T ss_pred HHHhhceeecCceeEEccCCC
Confidence 999666999999999999997
No 15
>PTZ00237 acetyl-CoA synthetase; Provisional
Probab=100.00 E-value=1.1e-51 Score=410.50 Aligned_cols=367 Identities=16% Similarity=0.206 Sum_probs=271.2
Q ss_pred CccCCCCCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEcCCC---------hhhhh
Q 014951 1 MRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENK---------IPSIL 71 (415)
Q Consensus 1 L~~~Gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~ii~~~~~---------~~~~~ 71 (415)
|+++||++||+|+++++|++|+++++|||+++|++++|+++.++++++.+++++++++++|+++.. .+.+.
T Consensus 109 L~~~Gv~~GDrV~i~~~n~~e~~~~~lA~~~~Gav~vpl~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~ 188 (647)
T PTZ00237 109 LLNLNISKNDNVLIYMANTLEPLIAMLSCARIGATHCVLFDGYSVKSLIDRIETITPKLIITTNYGILNDEIITFTPNLK 188 (647)
T ss_pred HHHcCCCCCCEEEEECCCCHHHHHHHHHHHHhCcEEEeeCCCCCHHHHHHHHHhcCCCEEEEcccceeCCceechHHHHH
Confidence 467899999999999999999999999999999999999999999999999999999999997631 22222
Q ss_pred hcCccCCCCccEEEEecCCCc-hhhHH----hhhcCceeecHHHHHhcC-----CCCCCCCCCCCCCeEEEEecCCCCCC
Q 014951 72 SCLPRCCLYLKTIVSFANVSS-SQKKE----AEELGVSCFSWEEFLQLG-----TLDCELPPKKKTNISTIMYTSGTTGE 141 (415)
Q Consensus 72 ~~~~~~~~~~~~v~~~~~~~~-~~~~~----~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~TSGtTG~ 141 (415)
.+........+.++.+..... ..... ..........|++++... .......+..++|+++|+|||||||.
T Consensus 189 ~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~IlyTSGTTG~ 268 (647)
T PTZ00237 189 EAIELSTFKPSNVITLFRNDITSESDLKKIETIPTIPNTLSWYDEIKKIKENNQSPFYEYVPVESSHPLYILYTSGTTGN 268 (647)
T ss_pred HHHhcccCCCCEEEEEEcCCcccccccccccccCCCcccccHHHHHhhhccccCCCCCCceeeCCCCcEEEEEcCCCCCC
Confidence 222111011234554321110 00000 000000123466655321 11112334578999999999999999
Q ss_pred CceEEeecHHHHHHh-hhhhhhhhhccccCCCCCEEEEeCChhhHHHHHHHHHhhhcCcEEEEeCCC-------HHHHHH
Q 014951 142 PKGVVLTNQAIVAEV-LSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRGD-------VRYLME 213 (415)
Q Consensus 142 pK~v~~th~~l~~~~-~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~vv~~~~~-------~~~~~~ 213 (415)
||||+++|.+.+... ......+ .....+++++..|++|..+...++.+++.|+++++.+.+ +..+++
T Consensus 269 PKgV~~sh~~~l~~~~~~~~~~~-----~~~~~d~~~~~~~~~w~~~~~~~~~~l~~G~t~v~~~~~~~~p~~~~~~~~~ 343 (647)
T PTZ00237 269 SKAVVRSNGPHLVGLKYYWRSII-----EKDIPTVVFSHSSIGWVSFHGFLYGSLSLGNTFVMFEGGIIKNKHIEDDLWN 343 (647)
T ss_pred CCeEEEcCcHHHHHHHHHHHHhc-----CCCCCcEEEEcCCCceEeeHHHHHHHHhCCcEEEEeCCCCCCCCCchHHHHH
Confidence 999999999844333 2222222 556789999999999987666678899999999987642 678999
Q ss_pred HHHhhCCeEEEeCcHHHHHHHHHHHHhhhcCChhhHHHHHHHHHhhhhccccCCCCCCccchhhHHHHHHHHHHhCCcee
Q 014951 214 DIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQ 293 (415)
Q Consensus 214 ~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr 293 (415)
.|++++||+++++|++++.+++...... ......++ ++||
T Consensus 344 ~i~~~~vt~~~~~P~~~~~l~~~~~~~~--------------------------------~~~~~~~l--------~~Lr 383 (647)
T PTZ00237 344 TIEKHKVTHTLTLPKTIRYLIKTDPEAT--------------------------------IIRSKYDL--------SNLK 383 (647)
T ss_pred HHHHhCeEEEEeCHHHHHHHHhhCcccc--------------------------------ccccccCc--------chhe
Confidence 9999999999999999998865210000 00000111 3899
Q ss_pred EEEEecCCCCHHHHHHHHHhcCCceEEeeccCCCCceeeeecCCcccccCcccccccCeEEEEeecCCCCCCCCCCCCCC
Q 014951 294 AMLSGAAPLPIHVEEFLRVTSGAPLTQGYGLTESCSGCFTSLADVFNMIGTVGVPMTTVEARLESVPEMGYDALSSVPRG 373 (415)
Q Consensus 294 ~v~~~G~~~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~G~~~~g~~~~i~~~~~~~~~~~~~~~~G 373 (415)
.+++||+++++++.+++++.+++++++.||+||+++.+...........+++|+|+||++++|+| +++..+ +.|+.|
T Consensus 384 ~i~~~G~~l~~~~~~~~~~~~g~~i~~~yG~TE~~~~~~~~~~~~~~~~~s~G~p~~g~~~~i~d-~~g~~~--~~ge~G 460 (647)
T PTZ00237 384 EIWCGGEVIEESIPEYIENKLKIKSSRGYGQTEIGITYLYCYGHINIPYNATGVPSIFIKPSILS-EDGKEL--NVNEIG 460 (647)
T ss_pred EEEecCccCCHHHHHHHHHhcCCCEEeeechHHhChhhhccCCCCCCCCCCCccCcCCceEEEEC-CCCCCC--CCCCce
Confidence 99999999999999999999999999999999998655433332223348999999999999999 776544 466999
Q ss_pred eEEEecC---CccccccCCchhhhhhhc--CCceecCceEEEcCCCC
Q 014951 374 EICLRGN---TLFSGYYKRPDLTEEVIV--DGWFHTGDIGEWQPMEL 415 (415)
Q Consensus 374 el~v~~~---~~~~gY~~~~~~~~~~~~--~g~~~TGDlg~~d~~G~ 415 (415)
||++++| +++.|||++++.+.+.|. +|||+|||+|++|+||+
T Consensus 461 El~v~~p~~p~~~~gy~~~~~~~~~~f~~~~g~~~TGDlg~~d~dG~ 507 (647)
T PTZ00237 461 EVAFKLPMPPSFATTFYKNDEKFKQLFSKFPGYYNSGDLGFKDENGY 507 (647)
T ss_pred EEEEeccCCchhhCceeCCHHHHHHHHhCCCCEEECCcEEEECCCCe
Confidence 9999986 789999999999988773 79999999999999996
No 16
>PLN02654 acetate-CoA ligase
Probab=100.00 E-value=3.9e-51 Score=407.99 Aligned_cols=364 Identities=17% Similarity=0.222 Sum_probs=273.2
Q ss_pred CccCCCCCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEcCCChhh---------hh
Q 014951 1 MRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPS---------IL 71 (415)
Q Consensus 1 L~~~Gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~---------~~ 71 (415)
|++.|+++||+|+++++|++|+++++|||+++|++++|+++.++++++..++++++++++|+++..... +.
T Consensus 137 L~~~Gv~~GdrV~i~~pn~~e~v~a~lA~~~~Gav~vpv~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~k~~~~~~~~~ 216 (666)
T PLN02654 137 LKDVGVKKGDAVVIYLPMLMELPIAMLACARIGAVHSVVFAGFSAESLAQRIVDCKPKVVITCNAVKRGPKTINLKDIVD 216 (666)
T ss_pred HHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEcCccccCCcccchHHHHH
Confidence 567899999999999999999999999999999999999999999999999999999999998764321 11
Q ss_pred hcCccC---CCCccEEEEecCCCchhhHHhhhcCceeecHHHHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEee
Q 014951 72 SCLPRC---CLYLKTIVSFANVSSSQKKEAEELGVSCFSWEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLT 148 (415)
Q Consensus 72 ~~~~~~---~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t 148 (415)
.+.... ......++......................|+++........+.....++|+++|+|||||||.||||+++
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ilyTSGTTG~PKgVv~s 296 (666)
T PLN02654 217 AALDESAKNGVSVGICLTYENQLAMKREDTKWQEGRDVWWQDVVPNYPTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHT 296 (666)
T ss_pred HHHHhccccCCCccEEEEecccccccccccccccCCcccHHHHhhcCCCCCCceecCCCCceEEEecCCCCCCCceEEec
Confidence 111100 01112222222211000000000000122344444322111222335789999999999999999999999
Q ss_pred cHHHHHHh-hhhhhhhhhccccCCCCCEEEEeCChhhHHHHHH-HHHhhhcCcEEEEeCC-----CHHHHHHHHHhhCCe
Q 014951 149 NQAIVAEV-LSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQII-ETHCIHKGCSIGFWRG-----DVRYLMEDIQELKPT 221 (415)
Q Consensus 149 h~~l~~~~-~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~-~~~~l~~G~~vv~~~~-----~~~~~~~~i~~~~~t 221 (415)
|.+++... ......+ +++++|++++.+|++|..+... ++.+++.|+++++.++ ++..+++.|+++++|
T Consensus 297 h~~~~~~~~~~~~~~~-----~~~~~d~~~~~~~~~~~~g~~~~~~~~L~~G~tvvl~~~~~~~~~~~~~~~~i~~~~vt 371 (666)
T PLN02654 297 TGGYMVYTATTFKYAF-----DYKPTDVYWCTADCGWITGHSYVTYGPMLNGATVLVFEGAPNYPDSGRCWDIVDKYKVT 371 (666)
T ss_pred ccHHHHHHHHHHHHhc-----CCCCCcEEEEcCCchhhhhhHHHHHHHHHcCceEEEECCCCCCCCHHHHHHHHHHhCCe
Confidence 99986443 3333334 6788999999999999998765 6788999999999863 789999999999999
Q ss_pred EEEeCcHHHHHHHHHHHHhhhcCChhhHHHHHHHHHhhhhccccCCCCCCccchhhHHHHHHHHHHhCCceeEEEEecCC
Q 014951 222 MFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAP 301 (415)
Q Consensus 222 ~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~~G~~ 301 (415)
+++++|++++.+.+.... .....++ ++||.++++|++
T Consensus 372 ~~~~~P~~~~~l~~~~~~-----------------------------------~~~~~~l--------~~Lr~i~~~Ge~ 408 (666)
T PLN02654 372 IFYTAPTLVRSLMRDGDE-----------------------------------YVTRHSR--------KSLRVLGSVGEP 408 (666)
T ss_pred EEEeCHHHHHHHHhhCcc-----------------------------------ccccCCh--------hheeEEEEecCC
Confidence 999999999988652100 0011112 389999999999
Q ss_pred CCHHHHHHHHHhcC---CceEEeeccCCCCceeeeecCCc-ccccCcccccccCeEEEEeecCCCCCCCCCCCCCCeEEE
Q 014951 302 LPIHVEEFLRVTSG---APLTQGYGLTESCSGCFTSLADV-FNMIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICL 377 (415)
Q Consensus 302 ~~~~~~~~~~~~~~---~~~~~~yG~tE~~~~~~~~~~~~-~~~~~~~G~~~~g~~~~i~~~~~~~~~~~~~~~~Gel~v 377 (415)
+++++.+++.+.++ +++.+.||+||+++......+.. ..+++++|+|++|++++|+| +++..+ +.++.|||++
T Consensus 409 l~~~~~~~~~~~~g~~~~~i~~~yg~TE~g~~~~~~~~~~~~~~~gs~G~p~~g~~v~i~d-~~g~~~--~~~~~Gel~v 485 (666)
T PLN02654 409 INPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVD-EKGKEI--EGECSGYLCV 485 (666)
T ss_pred CCHHHHHHHHHHhCCCCCceeccccccccCCeeeccCCCCCCCCCCccCCCCCCceEEEEC-CCCCCC--CCCCceEEEE
Confidence 99999999999887 68999999999987665443322 23458999999999999999 777644 4557899999
Q ss_pred ec--CCccccccCCchhhhhhh---cCCceecCceEEEcCCCC
Q 014951 378 RG--NTLFSGYYKRPDLTEEVI---VDGWFHTGDIGEWQPMEL 415 (415)
Q Consensus 378 ~~--~~~~~gY~~~~~~~~~~~---~~g~~~TGDlg~~d~~G~ 415 (415)
++ |+++.|||++++.+...+ .+|||+|||+|++|+||+
T Consensus 486 ~~~~p~~~~gy~~~~~~~~~~~~~~~~g~~~TGD~~~~d~dG~ 528 (666)
T PLN02654 486 KKSWPGAFRTLYGDHERYETTYFKPFAGYYFSGDGCSRDKDGY 528 (666)
T ss_pred cCCCchhhhhhcCChHHHHHhhhhcCCCEEEeCceEEECCCCc
Confidence 98 789999999999888776 379999999999999996
No 17
>PRK06334 long chain fatty acid--[acyl-carrier-protein] ligase; Validated
Probab=100.00 E-value=4.6e-51 Score=399.16 Aligned_cols=345 Identities=23% Similarity=0.243 Sum_probs=266.9
Q ss_pred CCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEcCCChhhhhhcCccCCCCccEEEE
Q 014951 7 NPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVS 86 (415)
Q Consensus 7 ~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~v~~ 86 (415)
.+||+|+++++|++++++++|||+++|++++||++.++.+++.++++.++++++|++.+....+.............++.
T Consensus 65 ~~gd~Val~~~n~~e~~~~~lA~~~~G~v~vpl~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~i~ 144 (539)
T PRK06334 65 YPDQHIGIMMPASAGAYIAYFATLLSGKIPVMINWSQGLREVTACANLVGVTHVLTSKQLMQHLAQTHGEDAEYPFSLIY 144 (539)
T ss_pred ccCCeEEEEcCCchHHHHHHHHHHhcCCeeEecCcccchHHHHHHHHHcCCCEEEehHHHHHHHhhhhhccccccccEEE
Confidence 48999999999999999999999999999999999999999999999999999999877655543322110001112333
Q ss_pred ecCCCchhhHHhhhcCceeecHHHHHh------cCC----CCCCCCCCCCCCeEEEEecCCCCCCCceEEeecHHHHHHh
Q 014951 87 FANVSSSQKKEAEELGVSCFSWEEFLQ------LGT----LDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEV 156 (415)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~----~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~ 156 (415)
++..... ..+.+... ... .........++++++|+|||||||.||+|++||+++..+.
T Consensus 145 ~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~th~~l~~~~ 212 (539)
T PRK06334 145 MEEVRKE------------LSFWEKCRIGIYMSIPFEWLMRWFGVSDKDPEDVAVILFTSGTEKLPKGVPLTHANLLANQ 212 (539)
T ss_pred Eehhhhh------------ccHHHhhhhhhhhcCCchhhhhcccCCCCCcCCEEEEEECCCCCCCCCEEEEcHHHHHHHH
Confidence 3221000 00000000 000 0011234567999999999999999999999999999887
Q ss_pred hhhhhhhhhccccCCCCCEEEEeCChhhHHHHHH-HHHhhhcCcEEEEeCC--CHHHHHHHHHhhCCeEEEeCcHHHHHH
Q 014951 157 LSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQII-ETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTMFSGVPRVYDRI 233 (415)
Q Consensus 157 ~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~-~~~~l~~G~~vv~~~~--~~~~~~~~i~~~~~t~~~~~P~~~~~l 233 (415)
......+ .+..+|++++++|++|.+++.. ++.++..|+++++... ++..+++.|+++++|++.++|++++.+
T Consensus 213 ~~~~~~~-----~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~vv~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l 287 (539)
T PRK06334 213 RACLKFF-----SPKEDDVMMSFLPPFHAYGFNSCTLFPLLSGVPVVFAYNPLYPKKIVEMIDEAKVTFLGSTPVFFDYI 287 (539)
T ss_pred HHHHHhc-----CCCCCceEEEecchHhhhhhHHHHHHHHHcCCeEEEecCCCCHHHHHHHHHHhCCcEEEecHHHHHHH
Confidence 6655544 6678999999999999999874 6778999999988753 899999999999999999999999988
Q ss_pred HHHHHHhhhcCChhhHHHHHHHHHhhhhccccCCCCCCccchhhHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHHHh
Q 014951 234 YTGISNKISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVT 313 (415)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~~G~~~~~~~~~~~~~~ 313 (415)
++..... ..+ .++||.+++||+++++++.+++.+.
T Consensus 288 ~~~~~~~-------------------------------------~~~--------~~~lr~i~~gG~~l~~~~~~~~~~~ 322 (539)
T PRK06334 288 LKTAKKQ-------------------------------------ESC--------LPSLRFVVIGGDAFKDSLYQEALKT 322 (539)
T ss_pred HHhhhhc-------------------------------------ccc--------cccccEEEECCccCCHHHHHHHHHH
Confidence 6532110 000 1489999999999999999999988
Q ss_pred c-CCceEEeeccCCCCceeeeecCCcccccCcccccccCeEEEEeecCCCCCCCCCCCCCCeEEEecCCccccccCCchh
Q 014951 314 S-GAPLTQGYGLTESCSGCFTSLADVFNMIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDL 392 (415)
Q Consensus 314 ~-~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~G~~~~g~~~~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gY~~~~~~ 392 (415)
+ +..+++.||+||++.++...........+++|+|++|++++|+| ++++ .+++.|+.|||+|+|++++.|||++++.
T Consensus 323 ~~~~~i~~~YG~TE~~~~~~~~~~~~~~~~~~vG~p~~g~~v~i~d-~~~~-~~~~~g~~Gel~v~g~~~~~GY~~~~~~ 400 (539)
T PRK06334 323 FPHIQLRQGYGTTECSPVITINTVNSPKHESCVGMPIRGMDVLIVS-EETK-VPVSSGETGLVLTRGTSLFSGYLGEDFG 400 (539)
T ss_pred CCCCeEEecccccccCceEEeccCCCCCCCCcCceecCCCEEEEEc-CCCC-ccCCCCceEEEEEecCcccccccCCccc
Confidence 8 68999999999998776655443333347899999999999998 5433 4566779999999999999999999986
Q ss_pred hhhhh--cCCceecCceEEEcCCCC
Q 014951 393 TEEVI--VDGWFHTGDIGEWQPMEL 415 (415)
Q Consensus 393 ~~~~~--~~g~~~TGDlg~~d~~G~ 415 (415)
+.... .+|||+|||+|++|+||+
T Consensus 401 ~~~~~~~~~~w~~TGD~g~~d~~G~ 425 (539)
T PRK06334 401 QGFVELGGETWYVTGDLGYVDRHGE 425 (539)
T ss_pred ccceeeCCceeEECCCEEEECCCCe
Confidence 54332 367999999999999985
No 18
>PLN02860 o-succinylbenzoate-CoA ligase
Probab=100.00 E-value=5.2e-51 Score=401.54 Aligned_cols=355 Identities=22% Similarity=0.208 Sum_probs=271.1
Q ss_pred CccCCCCCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEcCCChhhhhhcCccCCCC
Q 014951 1 MRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLY 80 (415)
Q Consensus 1 L~~~Gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~ 80 (415)
|.+.|+++||+|+++++|+++++++++||+++|++++||++.++.+++.++++++++++++++.+.............+.
T Consensus 49 L~~~Gv~~gd~V~v~~~n~~~~~~~~la~~~~Gav~vpl~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 128 (563)
T PLN02860 49 LLRLGLRNGDVVAIAALNSDLYLEWLLAVACAGGIVAPLNYRWSFEEAKSAMLLVRPVMLVTDETCSSWYEELQNDRLPS 128 (563)
T ss_pred HHHhCCCCCCEEEEEcCCCHHHHHHHHHHhhccEEEEeCCcccCHHHHHHHHHhcCceEEEEecccchHHHHHhhccCCc
Confidence 45689999999999999999999999999999999999999999999999999999999999886533222221111223
Q ss_pred ccEEEEecCCCchhhHHhhhcCceeecHHHHHhcC-CCCCCCCCCCCCCeEEEEecCCCCCCCceEEeecHHHHHHhhhh
Q 014951 81 LKTIVSFANVSSSQKKEAEELGVSCFSWEEFLQLG-TLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSV 159 (415)
Q Consensus 81 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~~~ 159 (415)
.+.++..+........ ........+++.... ..........++++++++|||||||.||+|+++|.++..+....
T Consensus 129 ~~~~i~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~s~~~~~~~~~~~ 204 (563)
T PLN02860 129 LMWQVFLESPSSSVFI----FLNSFLTTEMLKQRALGTTELDYAWAPDDAVLICFTSGTTGRPKGVTISHSALIVQSLAK 204 (563)
T ss_pred eeEEEEecCccccccc----chhhccccchhccCccccccccCCCCCCCeEEEEecCCCCCCCceEEeehHHHHHHHHHH
Confidence 3334433322100000 000111122221111 00111123467899999999999999999999999998776665
Q ss_pred hhhhhhccccCCCCCEEEEeCChhhHHHHHHHHHhhhcCcEEEEeCC-CHHHHHHHHHhhCCeEEEeCcHHHHHHHHHHH
Q 014951 160 DQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG-DVRYLMEDIQELKPTMFSGVPRVYDRIYTGIS 238 (415)
Q Consensus 160 ~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~vv~~~~-~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~ 238 (415)
...+ .+..+|+++.++|++|.+++...+.++..|+++++.+. ++..+++.|+++++|++.++|+++..+++...
T Consensus 205 ~~~~-----~~~~~d~~l~~~pl~h~~g~~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~ 279 (563)
T PLN02860 205 IAIV-----GYGEDDVYLHTAPLCHIGGLSSALAMLMVGACHVLLPKFDAKAALQAIKQHNVTSMITVPAMMADLISLTR 279 (563)
T ss_pred Hhhc-----CCCCCCEEEEecCchhhccHHHHHHHHHcCceEEecCCCCHHHHHHHHHHhCCeeEEeChHHHHHHHHhhh
Confidence 4444 67789999999999999998878888999999988876 99999999999999999999999998865321
Q ss_pred HhhhcCChhhHHHHHHHHHhhhhccccCCCCCCccchhhHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHHHhc-CCc
Q 014951 239 NKISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTS-GAP 317 (415)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~~G~~~~~~~~~~~~~~~-~~~ 317 (415)
.... ....+++|.+++||+++++++.+.+.+.+ +.+
T Consensus 280 ~~~~-------------------------------------------~~~~~~lr~~~~gG~~l~~~~~~~~~~~~~~~~ 316 (563)
T PLN02860 280 KSMT-------------------------------------------WKVFPSVRKILNGGGSLSSRLLPDAKKLFPNAK 316 (563)
T ss_pred hhhc-------------------------------------------cccccceeEEEeCCCcCCHHHHHHHHHhcCCCc
Confidence 1000 00114899999999999999999999888 689
Q ss_pred eEEeeccCCCCceeeeecCCc----------------------ccccCcccccccCeEEEEeecCCCCCCCCCCCCCCeE
Q 014951 318 LTQGYGLTESCSGCFTSLADV----------------------FNMIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEI 375 (415)
Q Consensus 318 ~~~~yG~tE~~~~~~~~~~~~----------------------~~~~~~~G~~~~g~~~~i~~~~~~~~~~~~~~~~Gel 375 (415)
+++.||+||++..+....... .....++|+|+++++++|++ ++ +++.|||
T Consensus 317 ~~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~p~~~~~v~i~~-~~-------~g~~Gel 388 (563)
T PLN02860 317 LFSAYGMTEACSSLTFMTLHDPTLESPKQTLQTVNQTKSSSVHQPQGVCVGKPAPHVELKIGL-DE-------SSRVGRI 388 (563)
T ss_pred eecCCCccccCcccccccccccccccchhhhhhhcccccccccccCCcccCCccCCcEEEEec-CC-------CCceeEE
Confidence 999999999976544322111 01124789999999999998 44 3589999
Q ss_pred EEecCCccccccCCchhhhhhh-cCCceecCceEEEcCCCC
Q 014951 376 CLRGNTLFSGYYKRPDLTEEVI-VDGWFHTGDIGEWQPMEL 415 (415)
Q Consensus 376 ~v~~~~~~~gY~~~~~~~~~~~-~~g~~~TGDlg~~d~~G~ 415 (415)
+++|+.++.|||++++.+.+.| .+|||+|||+|++|+||+
T Consensus 389 ~v~g~~~~~GY~~~~~~t~~~~~~~g~~~TGDl~~~d~dG~ 429 (563)
T PLN02860 389 LTRGPHVMLGYWGQNSETASVLSNDGWLDTGDIGWIDKAGN 429 (563)
T ss_pred EEecCcccccccCCccccchhccCCCeEEccceEEEcCCCC
Confidence 9999999999999999999888 689999999999999995
No 19
>PRK04319 acetyl-CoA synthetase; Provisional
Probab=100.00 E-value=1e-50 Score=400.17 Aligned_cols=353 Identities=16% Similarity=0.245 Sum_probs=284.9
Q ss_pred CccCCCCCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEcCCChhhhhhcCccCCCC
Q 014951 1 MRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLY 80 (415)
Q Consensus 1 L~~~Gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~ 80 (415)
|.+.|+++||+|+++++|++++++++|||+++|++++|+++.++++++.++++.++++++|++.......... ..+.
T Consensus 90 L~~~gv~~gd~V~i~~~n~~~~~~~~la~~~~G~v~vpl~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~---~~~~ 166 (570)
T PRK04319 90 LKELGVEKGDRVFIFMPRIPELYFALLGALKNGAIVGPLFEAFMEEAVRDRLEDSEAKVLITTPALLERKPAD---DLPS 166 (570)
T ss_pred HHHhCCCCCCEEEEECCCCHHHHHHHHHHHHcCcEEcccccccCHHHHHHHHHccCCcEEEEChhhhhccchh---cCCC
Confidence 4567999999999999999999999999999999999999999999999999999999999988765443211 1234
Q ss_pred ccEEEEecCCCchhhHHhhhcCceeecHHHHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEeecHHHHHHhhhhh
Q 014951 81 LKTIVSFANVSSSQKKEAEELGVSCFSWEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVD 160 (415)
Q Consensus 81 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~~~~ 160 (415)
.+.++.++.... ......++.+++..........+..++++++++|||||||.||+|+++|+++..++....
T Consensus 167 ~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~s~~~l~~~~~~~~ 238 (570)
T PRK04319 167 LKHVLLVGEDVE--------EGPGTLDFNALMEQASDEFDIEWTDREDGAILHYTSGSTGKPKGVLHVHNAMLQHYQTGK 238 (570)
T ss_pred ceEEEEECCCcC--------CCcCccCHHHHHhhcCCcCCccccCCCCCEEEEeCCCCCCCCCEEEEecHHHHHHHHHHH
Confidence 455555543211 011234566655443222333455678999999999999999999999999998877665
Q ss_pred hhhhhccccCCCCCEEEEeCChhhHHHHHH-HHHhhhcCcEEEEeCC--CHHHHHHHHHhhCCeEEEeCcHHHHHHHHHH
Q 014951 161 QMFVVTGKVCSEEDTYFSFLPLAHIYDQII-ETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTMFSGVPRVYDRIYTGI 237 (415)
Q Consensus 161 ~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~-~~~~l~~G~~vv~~~~--~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~ 237 (415)
..+ .+..+|++++..|++|.++... ++.+++.|+++++... ++..+++.|+++++|+++++|++++.+.+..
T Consensus 239 ~~~-----~~~~~d~~~~~~~~~~~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~ 313 (570)
T PRK04319 239 YVL-----DLHEDDVYWCTADPGWVTGTSYGIFAPWLNGATNVIDGGRFSPERWYRILEDYKVTVWYTAPTAIRMLMGAG 313 (570)
T ss_pred Hhc-----CCCCCceEEecCChHHhhCchHHHHHHHhcCceEEEECCCCCHHHHHHHHHHcCCeEEEeCHHHHHHHHhcC
Confidence 555 6778999999999999988764 7788999999998754 8999999999999999999999999886411
Q ss_pred HHhhhcCChhhHHHHHHHHHhhhhccccCCCCCCccchhhHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHHHhcCCc
Q 014951 238 SNKISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAP 317 (415)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~~G~~~~~~~~~~~~~~~~~~ 317 (415)
... ....++ +++|.+++||+++++++.+++++.++.+
T Consensus 314 ~~~-----------------------------------~~~~~~--------~~lr~~~~gG~~l~~~~~~~~~~~~g~~ 350 (570)
T PRK04319 314 DDL-----------------------------------VKKYDL--------SSLRHILSVGEPLNPEVVRWGMKVFGLP 350 (570)
T ss_pred Ccc-----------------------------------cccCCc--------ccceEEEEcccCCCHHHHHHHHHHhCCC
Confidence 000 000011 3899999999999999999999999999
Q ss_pred eEEeeccCCCCceeeeecCCcccccCcccccccCeEEEEeecCCCCCCCCCCCCCCeEEEec--CCccccccCCchhhhh
Q 014951 318 LTQGYGLTESCSGCFTSLADVFNMIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRG--NTLFSGYYKRPDLTEE 395 (415)
Q Consensus 318 ~~~~yG~tE~~~~~~~~~~~~~~~~~~~G~~~~g~~~~i~~~~~~~~~~~~~~~~Gel~v~~--~~~~~gY~~~~~~~~~ 395 (415)
+++.||+||++..+..........++++|+|+||++++|++ +++... +.|+.|||+++| |.++.|||++++.+.+
T Consensus 351 i~~~YG~tE~~~~~~~~~~~~~~~~~~~G~p~~g~~~~i~d-~~~~~~--~~g~~Gel~i~~~~~~~~~GY~~~~~~~~~ 427 (570)
T PRK04319 351 IHDNWWMTETGGIMIANYPAMDIKPGSMGKPLPGIEAAIVD-DQGNEL--PPNRMGNLAIKKGWPSMMRGIWNNPEKYES 427 (570)
T ss_pred eEeceeecccCCEEEecCCCCCCCCCcCcCCCCCCEEEEEC-CCCCCC--CCCCceEEEEcCCCChHHhHhcCCHHHhhh
Confidence 99999999998776554443333458999999999999999 776544 567999999997 8999999999999999
Q ss_pred hhcCCceecCceEEEcCCCC
Q 014951 396 VIVDGWFHTGDIGEWQPMEL 415 (415)
Q Consensus 396 ~~~~g~~~TGDlg~~d~~G~ 415 (415)
.|.+|||+|||+|++|+||+
T Consensus 428 ~~~~gw~~TGDl~~~~~~g~ 447 (570)
T PRK04319 428 YFAGDWYVSGDSAYMDEDGY 447 (570)
T ss_pred hhcCCceEeCcEEEECCCee
Confidence 99999999999999999984
No 20
>PF00501 AMP-binding: AMP-binding enzyme; InterPro: IPR000873 A number of prokaryotic and eukaryotic enzymes, which appear to act via an ATP-dependent covalent binding of AMP to their substrate, share a region of sequence similarity [, , ]. This region is a Ser/Thr/Gly-rich domain that is further characterised by a conserved Pro-Lys-Gly triplet. The family of enzymes includes luciferase, long chain fatty acid Co-A ligase, acetyl-CoA synthetase and various other closely-related synthetases.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 2V7B_A 2Y4O_B 2VSQ_A 3L8C_B 1RY2_A 3KXW_A 3LNV_A 3ETC_B 3A9U_A 3A9V_A ....
Probab=100.00 E-value=6.8e-51 Score=387.12 Aligned_cols=351 Identities=28% Similarity=0.465 Sum_probs=266.9
Q ss_pred CccCCCCCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEE----cCCChhhhhhcCcc
Q 014951 1 MRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFV----QENKIPSILSCLPR 76 (415)
Q Consensus 1 L~~~Gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~ii~----~~~~~~~~~~~~~~ 76 (415)
|+++|+++||+|+++++|+++++++++||+++|++++||+|.++.+++.++++.++++++|+ +......+......
T Consensus 38 L~~~g~~~~~~V~i~~~n~~~~~~~~~A~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~d~~~~~~~~~~~~~ 117 (417)
T PF00501_consen 38 LRKLGVKKGDRVAILLPNSIEFVVAFLACLRAGAIPVPLDPSLSEDELRHILRQSGPKVIITSEAVDSEPLKKLKSIFKQ 117 (417)
T ss_dssp HHHTTSSTTSEEEEEESSSHHHHHHHHHHHHTT-EEEEEETTSSHHHHHHHHHHHTESEEEECHHHSCHHHHHHHHHHTT
T ss_pred HHHhCCCccccccccCCccceeeeeecccccccccccccccccccccccccccccceeEEEEeccccccccccchhhhcc
Confidence 35679999999999999999999999999999999999999999999999999999999997 22222222222221
Q ss_pred CCCCccEEEEecCCCchhhHHhhhcCceeecHHHHHhcC-CCCCCCCC-CCCCCeEEEEecCCCCCCCceEEeecHHHHH
Q 014951 77 CCLYLKTIVSFANVSSSQKKEAEELGVSCFSWEEFLQLG-TLDCELPP-KKKTNISTIMYTSGTTGEPKGVVLTNQAIVA 154 (415)
Q Consensus 77 ~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~i~~TSGtTG~pK~v~~th~~l~~ 154 (415)
. .....++.++....... +.+.... ..... .+ ..++++++++|||||||.||+|.++|++++.
T Consensus 118 ~-~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~-~~~~~~~~~~~i~~TSGTTG~pK~v~~t~~~~~~ 182 (417)
T PF00501_consen 118 E-DPSSSIIILDRDDLPKK-------------EALKSASLSDEPQ-SPEDSPDDPAFILFTSGTTGKPKGVVLTHRNLLA 182 (417)
T ss_dssp S-TTTEEEEEESHSSCTTC-------------HHHHHHHHCHCSH-STTHTTTSEEEEEEESSSSSSEEEEEEEHHHHHH
T ss_pred c-ccccccccccccccccc-------------ccccccccccccc-cCCCCccceeEeeccccccccccccccccccccc
Confidence 1 23345555553321110 0000000 00000 00 0568999999999999999999999999999
Q ss_pred HhhhhhhhhhhccccCCCCCEEEEeCChhhHHHH-HHHHHhhhcCcEEEEeCC-C---HHHHHHHHHhhCCeEEEeCcHH
Q 014951 155 EVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQ-IIETHCIHKGCSIGFWRG-D---VRYLMEDIQELKPTMFSGVPRV 229 (415)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~-~~~~~~l~~G~~vv~~~~-~---~~~~~~~i~~~~~t~~~~~P~~ 229 (415)
.+..+. +... ..++ |++++++|++|.+++ ..++.+++.|+++++.+. . +..+++.+++++||+++++|++
T Consensus 183 ~~~~~~--~~~~-~~~~--d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~ 257 (417)
T PF00501_consen 183 QARALA--LPEY-FGLG--DRILSFLPLSHIFGLISALLAALFSGATLVLPSPFDLFDPESLLELISRYKPTILFAVPSM 257 (417)
T ss_dssp HHHHHH--HHHT-TTTT--TEEEESS-TTSHHHHHHHHHHHHHCTSEEEEESSHHHHHHHHHHHHHHHHTESEEEEEHHH
T ss_pred cccccc--cccc-cccC--ceEEeeccccccccccccccccccccccccccccccccccccchhcccccccccccccccc
Confidence 988754 1100 1222 699999999999999 578999999999999987 2 5778999999999999999999
Q ss_pred HHHHHHHHHHhhhcCChhhHHHHHHHHHhhhhccccCCCCCCccchhhHHHHHHHHHHhCCceeEEEEecCCCCHHHHHH
Q 014951 230 YDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEF 309 (415)
Q Consensus 230 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~~G~~~~~~~~~~ 309 (415)
++.+++ ....... .... ..+++|.++++|+++++++.++
T Consensus 258 l~~l~~-~~~~~~~--------------------------------~~~~--------~l~~lr~v~~~G~~l~~~~~~~ 296 (417)
T PF00501_consen 258 LEALLQ-SPEEKTK--------------------------------ISKK--------DLSSLRTVISGGEPLPPDLLRR 296 (417)
T ss_dssp HHHHHH-HHHTTHH--------------------------------GTTT--------TGTT-SEEEEESST-CHHHHHH
T ss_pred cccccc-ccccccc--------------------------------cccc--------ccccccccccccccCChhhccc
Confidence 999876 2111000 0000 1136999999999999999999
Q ss_pred HHHhcCC-ceEEeeccCCCCceeeeec-CCcccccCcccccccCeEEEEeecCC-CCCCCCCCCCCCeEEEecCCccccc
Q 014951 310 LRVTSGA-PLTQGYGLTESCSGCFTSL-ADVFNMIGTVGVPMTTVEARLESVPE-MGYDALSSVPRGEICLRGNTLFSGY 386 (415)
Q Consensus 310 ~~~~~~~-~~~~~yG~tE~~~~~~~~~-~~~~~~~~~~G~~~~g~~~~i~~~~~-~~~~~~~~~~~Gel~v~~~~~~~gY 386 (415)
+++.++. ++++.||+||++.+++... .......+++|.|+||++++|+| ++ +. +++.|+.|||+++||.++.||
T Consensus 297 ~~~~~~~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~ivd-~~~~~--~~~~g~~Gei~i~~~~~~~gy 373 (417)
T PF00501_consen 297 LRKAFGNAPIINLYGSTETGSIATIRPPEDDIEKPGSVGKPLPGVEVKIVD-PNTGE--PLPPGEPGEIVIRGPNVFSGY 373 (417)
T ss_dssp HHHHHTTSEEEEEEEEGGGSSEEEEEETTTHHSSTTSEBEESTTEEEEEEC-TTTSS--BESTTSEEEEEEESTTSBSEE
T ss_pred cccccccccceecccccccceeeeccccccccccccccccccccccccccc-ccccc--cccccccccccccCCccceee
Confidence 9999987 9999999999999887663 23333458899999999999999 55 54 446779999999999999999
Q ss_pred cCCchhhhhhhcC-CceecCceEEEcCCCC
Q 014951 387 YKRPDLTEEVIVD-GWFHTGDIGEWQPMEL 415 (415)
Q Consensus 387 ~~~~~~~~~~~~~-g~~~TGDlg~~d~~G~ 415 (415)
+++++.+.++|.+ |||+|||+|++|+||+
T Consensus 374 ~~~~~~~~~~~~~~~~~~TGD~g~~d~~G~ 403 (417)
T PF00501_consen 374 YNDPELTAEAFIDDGWYRTGDLGRLDEDGY 403 (417)
T ss_dssp TTBHHHHHHHEETTSEEEEEEEEEEETTSE
T ss_pred eccccccccccccccceecceEEEECCCCe
Confidence 9999999999954 8999999999999985
No 21
>PRK08180 feruloyl-CoA synthase; Reviewed
Probab=100.00 E-value=6.9e-50 Score=396.87 Aligned_cols=345 Identities=19% Similarity=0.352 Sum_probs=262.8
Q ss_pred CccCCCCCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCCCCC-----HHHHHHHHHhcCceEEEEcCCC--hhhhhhc
Q 014951 1 MRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLG-----ANAVEFIINHAEVSIAFVQENK--IPSILSC 73 (415)
Q Consensus 1 L~~~Gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~-----~~~l~~~l~~~~~~~ii~~~~~--~~~~~~~ 73 (415)
|.+.|+++||+|+++++|+++++++++||+++|++++|+++.++ .+++.+++++++++++|+++.. ...+...
T Consensus 86 L~~~Gv~~gd~Vai~~~n~~e~~~~~lA~~~~Gav~vpl~~~~~~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~ 165 (614)
T PRK08180 86 LLDRGLSAERPLMILSGNSIEHALLALAAMYAGVPYAPVSPAYSLVSQDFGKLRHVLELLTPGLVFADDGAAFARALAAV 165 (614)
T ss_pred HHHcCCCCCCEEEEecCCCHHHHHHHHHHHHcCCeEeeeccccccccCCHHHHHHHHhcCCCcEEEEcCHHHHHHHHhhh
Confidence 45789999999999999999999999999999999999999998 7999999999999999998642 1222111
Q ss_pred CccCCCCccEEEEecCCCchhhHHhhhcCceeecHHHHHhcCCC---CCCCCCCCCCCeEEEEecCCCCCCCceEEeecH
Q 014951 74 LPRCCLYLKTIVSFANVSSSQKKEAEELGVSCFSWEEFLQLGTL---DCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQ 150 (415)
Q Consensus 74 ~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~th~ 150 (415)
. .....++..+.... ......++++...... ........++|+++|+|||||||.||||++||+
T Consensus 166 ~----~~~~~~i~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~ilyTSGTTG~PKgV~~sh~ 232 (614)
T PRK08180 166 V----PADVEVVAVRGAVP---------GRAATPFAALLATPPTAAVDAAHAAVGPDTIAKFLFTSGSTGLPKAVINTHR 232 (614)
T ss_pred c----cCCceEEEecCCCC---------CcccccHHHHhccccccchhhhccCCCcCceEEEEECCCCCCCCCEEEeehH
Confidence 1 11112333222100 0012345555433211 111123467899999999999999999999999
Q ss_pred HHHHHhhhhhhhhhhccccC--CCCCEEEEeCChhhHHHHHH-HHHhhhcCcEEEEeCC-----CHHHHHHHHHhhCCeE
Q 014951 151 AIVAEVLSVDQMFVVTGKVC--SEEDTYFSFLPLAHIYDQII-ETHCIHKGCSIGFWRG-----DVRYLMEDIQELKPTM 222 (415)
Q Consensus 151 ~l~~~~~~~~~~~~~~~~~~--~~~d~~l~~~p~~~~~~~~~-~~~~l~~G~~vv~~~~-----~~~~~~~~i~~~~~t~ 222 (415)
++..+.......+ .. ...+++++++|++|.+++.. ++.+++.|+++++.+. ...++++.++++++|+
T Consensus 233 ~l~~~~~~~~~~~-----~~~~~~~~~~l~~lPl~h~~g~~~~~~~~l~~G~~v~~~~~~~~~~~~~~~l~~i~~~~~t~ 307 (614)
T PRK08180 233 MLCANQQMLAQTF-----PFLAEEPPVLVDWLPWNHTFGGNHNLGIVLYNGGTLYIDDGKPTPGGFDETLRNLREISPTV 307 (614)
T ss_pred HHHHHHHHHHhhc-----cccCCCCcEEEEecchHHHhhHHHHHHHHHhcCCEEEEeCCCccchhHHHHHHHHHHhCCcE
Confidence 9998877655544 32 25689999999999999864 6678999999998752 3457888999999999
Q ss_pred EEeCcHHHHHHHHHHHHhhhcCChhhHHHHHHHHHhhhhccccCCCCCCccchhhHHHHHHHHHHhCCceeEEEEecCCC
Q 014951 223 FSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPL 302 (415)
Q Consensus 223 ~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~~G~~~ 302 (415)
++++|.++..+++.+.... . .+....+++|.+++||+++
T Consensus 308 ~~~vP~~~~~l~~~~~~~~---------------------------------~--------~~~~~~~~lr~v~~gGa~l 346 (614)
T PRK08180 308 YFNVPKGWEMLVPALERDA---------------------------------A--------LRRRFFSRLKLLFYAGAAL 346 (614)
T ss_pred EechHHHHHHHHHHHHhch---------------------------------h--------hhhhhccceeEEEEccCCC
Confidence 9999999999876432110 0 0111124899999999999
Q ss_pred CHHHHHHHHHh----cC--CceEEeeccCCCCceeeeecCCcccccCcccccccCeEEEEeecCCCCCCCCCCCCCCeEE
Q 014951 303 PIHVEEFLRVT----SG--APLTQGYGLTESCSGCFTSLADVFNMIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEIC 376 (415)
Q Consensus 303 ~~~~~~~~~~~----~~--~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~G~~~~g~~~~i~~~~~~~~~~~~~~~~Gel~ 376 (415)
++++.+++.+. ++ +++++.||+||++.+++...... ...+++|+|++|++++|++ + +..|||+
T Consensus 347 ~~~~~~~~~~~~~~~~g~~~~l~~~YG~TE~~~~~~~~~~~~-~~~~svG~p~pg~~v~i~d-~---------~~~GEi~ 415 (614)
T PRK08180 347 SQDVWDRLDRVAEATCGERIRMMTGLGMTETAPSATFTTGPL-SRAGNIGLPAPGCEVKLVP-V---------GGKLEVR 415 (614)
T ss_pred CHHHHHHHHHHHHhhcCCCceeeeeecccccCCceEeccccc-CCCCcccCccCCcEEEEec-C---------CCCcEEE
Confidence 99999998874 33 67999999999987665543332 3458999999999999988 3 2469999
Q ss_pred EecCCccccccCCchhhhhhh-cCCceecCceEEE----cCCCC
Q 014951 377 LRGNTLFSGYYKRPDLTEEVI-VDGWFHTGDIGEW----QPMEL 415 (415)
Q Consensus 377 v~~~~~~~gY~~~~~~~~~~~-~~g~~~TGDlg~~----d~~G~ 415 (415)
++||+++.|||++|+.|.+.| .||||+|||+|++ |+||+
T Consensus 416 vrg~~v~~GY~~~p~~t~~~~~~dgw~~TGDlg~~~~~~d~~g~ 459 (614)
T PRK08180 416 VKGPNVTPGYWRAPELTAEAFDEEGYYRSGDAVRFVDPADPERG 459 (614)
T ss_pred EecCccchhhcCChhHhHhhcccCCceeccceEEecCCcCCCCc
Confidence 999999999999999999999 5899999999999 45664
No 22
>PRK07529 AMP-binding domain protein; Validated
Probab=100.00 E-value=7e-50 Score=397.57 Aligned_cols=361 Identities=23% Similarity=0.326 Sum_probs=277.4
Q ss_pred CccCCCCCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEcCCCh-----hhhhhcCc
Q 014951 1 MRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKI-----PSILSCLP 75 (415)
Q Consensus 1 L~~~Gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~-----~~~~~~~~ 75 (415)
|++.|+++||+|+++++|++++++++|||+++| +++||++.++++++.++++.++++++|++.... ..+.....
T Consensus 75 L~~~Gi~~gd~V~i~~~n~~e~~~~~lA~~~~G-i~~pi~~~~~~~~i~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~ 153 (632)
T PRK07529 75 LHSLGVGPGDVVAFLLPNLPETHFALWGGEAAG-IANPINPLLEPEQIAELLRAAGAKVLVTLGPFPGTDIWQKVAEVLA 153 (632)
T ss_pred HHHcCCCCCCEEEEECCCCHHHHHHHHHHHHhC-EEEeCCCcCCHHHHHHHHHhcCCcEEEEeCCCCCchHHHHHHHHHh
Confidence 456899999999999999999999999999999 579999999999999999999999999986542 22222222
Q ss_pred cCCCCccEEEEecCCCchhh--HHh-----hhcCceeecHHHHHhcCCCC--CCCCCCCCCCeEEEEecCCCCCCCceEE
Q 014951 76 RCCLYLKTIVSFANVSSSQK--KEA-----EELGVSCFSWEEFLQLGTLD--CELPPKKKTNISTIMYTSGTTGEPKGVV 146 (415)
Q Consensus 76 ~~~~~~~~v~~~~~~~~~~~--~~~-----~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~i~~TSGtTG~pK~v~ 146 (415)
. .+..+.++.++....... ... ......+..+.+.+...... .......++++++++|||||||.||+|.
T Consensus 154 ~-~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~a~i~~TSGTTG~PK~v~ 232 (632)
T PRK07529 154 A-LPELRTVVEVDLARYLPGPKRLAVPLIRRKAHARILDFDAELARQPGDRLFSGRPIGPDDVAAYFHTGGTTGMPKLAQ 232 (632)
T ss_pred c-CCcceeEEEecCcccccccccccccccccccccccCCHHHHHhcCCCccccccCCCCcCceEEEEECCCccCcCCEEE
Confidence 1 244556665543210000 000 00112344566655443211 1122346799999999999999999999
Q ss_pred eecHHHHHHhhhhhhhhhhccccCCCCCEEEEeCChhhHHHHHH-HHHhhhcCcEEEEeCC----C---HHHHHHHHHhh
Q 014951 147 LTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQII-ETHCIHKGCSIGFWRG----D---VRYLMEDIQEL 218 (415)
Q Consensus 147 ~th~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~-~~~~l~~G~~vv~~~~----~---~~~~~~~i~~~ 218 (415)
+||.++..+.......+ .+.++|++++.+|++|.++... ++.++..|+++++.+. + ...+++.++++
T Consensus 233 ~sh~~l~~~~~~~~~~~-----~~~~~d~~l~~~pl~h~~~~~~~~~~~l~~G~~vv~~~~~~~~~~~~~~~~~~~i~~~ 307 (632)
T PRK07529 233 HTHGNEVANAWLGALLL-----GLGPGDTVFCGLPLFHVNALLVTGLAPLARGAHVVLATPQGYRGPGVIANFWKIVERY 307 (632)
T ss_pred EcHHHHHHHHHHHHHhc-----CCCCCCEEEEecCchhhhHHHHHHHHHHHCCCEEEecCccccCcchHHHHHHHHHHHh
Confidence 99999998877655554 5678999999999999999875 7788999999999753 2 36888999999
Q ss_pred CCeEEEeCcHHHHHHHHHHHHhhhcCChhhHHHHHHHHHhhhhccccCCCCCCccchhhHHHHHHHHHHhCCceeEEEEe
Q 014951 219 KPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSG 298 (415)
Q Consensus 219 ~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~~ 298 (415)
++|++.++|+++..+++... ...++ +++|.+++|
T Consensus 308 ~vt~~~~~P~~~~~l~~~~~--------------------------------------~~~~~--------~slr~v~~g 341 (632)
T PRK07529 308 RINFLSGVPTVYAALLQVPV--------------------------------------DGHDI--------SSLRYALCG 341 (632)
T ss_pred CCeEEEeHHHHHHHHHhCcc--------------------------------------cCCCc--------cceEEEEEc
Confidence 99999999999998764100 00011 489999999
Q ss_pred cCCCCHHHHHHHHHhcCCceEEeeccCCCCceeeeecCCcccccCcccccccCeEEEEeecCCCCC--CCCCCCCCCeEE
Q 014951 299 AAPLPIHVEEFLRVTSGAPLTQGYGLTESCSGCFTSLADVFNMIGTVGVPMTTVEARLESVPEMGY--DALSSVPRGEIC 376 (415)
Q Consensus 299 G~~~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~G~~~~g~~~~i~~~~~~~~--~~~~~~~~Gel~ 376 (415)
|+++++++.+++++.++.++++.||+||++.++.....+.....+++|.|+|+++++|+..++++. .+++.|+.|||+
T Consensus 342 g~~l~~~l~~~~~~~~g~~l~~~YG~TE~~~~~~~~~~~~~~~~~svG~~~p~~~v~i~~~d~~g~~~~~~~~g~~Gel~ 421 (632)
T PRK07529 342 AAPLPVEVFRRFEAATGVRIVEGYGLTEATCVSSVNPPDGERRIGSVGLRLPYQRVRVVILDDAGRYLRDCAVDEVGVLC 421 (632)
T ss_pred CCCCCHHHHHHHHHHhCCcEeeeecccccCcccccCCccccccCCCcccccCCceEEEEEcCCCCcccccCCCCCceEEE
Confidence 999999999999999999999999999998777665544344568999999999999975333331 456778999999
Q ss_pred EecCCccccccCCchhhhhhh-cCCceecCceEEEcCCCC
Q 014951 377 LRGNTLFSGYYKRPDLTEEVI-VDGWFHTGDIGEWQPMEL 415 (415)
Q Consensus 377 v~~~~~~~gY~~~~~~~~~~~-~~g~~~TGDlg~~d~~G~ 415 (415)
|+||+++.||++++. +...| .+|||+|||+|++|+||+
T Consensus 422 v~gp~v~~GY~~~~~-~~~~~~~~gw~~TGDlg~~d~dG~ 460 (632)
T PRK07529 422 IAGPNVFSGYLEAAH-NKGLWLEDGWLNTGDLGRIDADGY 460 (632)
T ss_pred EECCCccccccCCcc-ccccccCCCceEcCcEEEEcCCce
Confidence 999999999998654 45555 789999999999999985
No 23
>TIGR02188 Ac_CoA_lig_AcsA acetate--CoA ligase. This model describes acetate-CoA ligase (EC 6.2.1.1), also called acetyl-CoA synthetase and acetyl-activating enzyme. It catalyzes the reaction ATP + acetate + CoA = AMP + diphosphate + acetyl-CoA and belongs to the family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=100.00 E-value=7.1e-50 Score=398.27 Aligned_cols=360 Identities=19% Similarity=0.267 Sum_probs=276.6
Q ss_pred CccCCCCCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEcCCCh---------hhhh
Q 014951 1 MRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKI---------PSIL 71 (415)
Q Consensus 1 L~~~Gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~---------~~~~ 71 (415)
|++.|+++||+|+++++|+++++++++||+++|++++|+++.++.+++.+++++++++++|+++... ..+.
T Consensus 105 L~~~Gv~~gd~V~i~~~n~~e~~~~~lA~~~~Gav~v~i~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~ 184 (625)
T TIGR02188 105 LKSLGVKKGDRVAIYMPMIPEAAIAMLACARIGAIHSVVFGGFSAEALADRINDAGAKLVITADEGLRGGKVIPLKAIVD 184 (625)
T ss_pred HHHcCCCCCCEEEEECCCCHHHHHHHHHHHHhCCEEeccCCCCCHHHHHHHHHhcCCCEEEEcCccccCCcccchHHHHH
Confidence 4578999999999999999999999999999999999999999999999999999999999987532 1222
Q ss_pred hcCccCCC-CccEEEEecCCCchhhHHhhhcCceeecHHHHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEeecH
Q 014951 72 SCLPRCCL-YLKTIVSFANVSSSQKKEAEELGVSCFSWEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQ 150 (415)
Q Consensus 72 ~~~~~~~~-~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~th~ 150 (415)
...... + .++.++.++....... . .......++++..............++++++|+|||||||.||||+++|.
T Consensus 185 ~~~~~~-~~~~~~~~~~~~~~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~il~TSGTTG~PKgV~~s~~ 259 (625)
T TIGR02188 185 EALEKC-PVSVEHVLVVRRTGNPVP-W---VEGRDVWWHDLMAKASAYCEPEPMDSEDPLFILYTSGSTGKPKGVLHTTG 259 (625)
T ss_pred HHHHhC-CCCccEEEEEcCCCCCcC-c---cccccccHHHHHhhcCCCCCceecCCCCceEEEecCCCCCCCCeEEECcc
Confidence 222111 2 3455665543221100 0 00112335555543322223345677899999999999999999999999
Q ss_pred HHHHHhhhh-hhhhhhccccCCCCCEEEEeCChhhHHHHHH-HHHhhhcCcEEEEeCC-----CHHHHHHHHHhhCCeEE
Q 014951 151 AIVAEVLSV-DQMFVVTGKVCSEEDTYFSFLPLAHIYDQII-ETHCIHKGCSIGFWRG-----DVRYLMEDIQELKPTMF 223 (415)
Q Consensus 151 ~l~~~~~~~-~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~-~~~~l~~G~~vv~~~~-----~~~~~~~~i~~~~~t~~ 223 (415)
+++...... ...+ .+.++|++++..|++|..+... ++.+++.|+++++.+. ++..+++.|+++++|++
T Consensus 260 ~~~~~~~~~~~~~~-----~~~~~d~~~~~~~~~~~~g~~~~~~~~l~~G~t~vl~~~~~~~~~~~~~~~~i~~~~vt~~ 334 (625)
T TIGR02188 260 GYLLYAAMTMKYVF-----DIKDGDIFWCTADVGWITGHSYIVYGPLANGATTVMFEGTPTYPDPGRFWEIIEKHKVTIF 334 (625)
T ss_pred HhHHHHHHHHHhcc-----CCCCCcEEEECCCchhhhccHHHHHHHHHcCCeEEEECCCCCCCChhHHHHHHHHhCCeEE
Confidence 987554332 2222 6678999999999999988764 7788999999998753 78999999999999999
Q ss_pred EeCcHHHHHHHHHHHHhhhcCChhhHHHHHHHHHhhhhccccCCCCCCccchhhHHHHHHHHHHhCCceeEEEEecCCCC
Q 014951 224 SGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLP 303 (415)
Q Consensus 224 ~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~~G~~~~ 303 (415)
+++|++++.+.+..... ....++ ++||.++++|++++
T Consensus 335 ~~~P~~~~~l~~~~~~~-----------------------------------~~~~~l--------~~lr~i~~~G~~l~ 371 (625)
T TIGR02188 335 YTAPTAIRALMRLGDEW-----------------------------------VKKHDL--------SSLRLLGSVGEPIN 371 (625)
T ss_pred EeCHHHHHHHHhcCCcc-----------------------------------cccCCc--------cceeEEEEecCCCC
Confidence 99999999876521100 000111 48999999999999
Q ss_pred HHHHHHHHHhcC---CceEEeeccCCCCceeeeecCCc-ccccCcccccccCeEEEEeecCCCCCCCCCCCCCCeEEEec
Q 014951 304 IHVEEFLRVTSG---APLTQGYGLTESCSGCFTSLADV-FNMIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRG 379 (415)
Q Consensus 304 ~~~~~~~~~~~~---~~~~~~yG~tE~~~~~~~~~~~~-~~~~~~~G~~~~g~~~~i~~~~~~~~~~~~~~~~Gel~v~~ 379 (415)
+++.+++.+.++ +++++.||+||+++.+....+.. ..+++++|+|++|++++|+| +++..++ +.|+.|||++++
T Consensus 372 ~~~~~~~~~~~~~~~~~i~~~yG~TE~~~~~~~~~~~~~~~~~~~~G~p~~g~~~~i~d-~~g~~~~-~~g~~GeL~v~~ 449 (625)
T TIGR02188 372 PEAWMWYYKVVGKERCPIVDTWWQTETGGIMITPLPGATPTKPGSATLPFFGIEPAVVD-EEGNPVE-GPGEGGYLVIKQ 449 (625)
T ss_pred HHHHHHHHHHcCCCCCceEecccccccCCceeecCCCCCCcCCCcccCCcCCceEEEEC-CCCCCCC-CCCCeEEEEEcc
Confidence 999999998885 68999999999987765543321 23458999999999999999 7776443 267899999999
Q ss_pred --CCccccccCCchhhhhhh---cCCceecCceEEEcCCCC
Q 014951 380 --NTLFSGYYKRPDLTEEVI---VDGWFHTGDIGEWQPMEL 415 (415)
Q Consensus 380 --~~~~~gY~~~~~~~~~~~---~~g~~~TGDlg~~d~~G~ 415 (415)
|+++.|||++++.+.+.+ .+|||+|||+|++|+||+
T Consensus 450 p~p~~~~gy~~~~~~~~~~~~~~~~g~~~TGDl~~~d~dG~ 490 (625)
T TIGR02188 450 PWPGMLRTIYGDHERFVDTYFSPFPGYYFTGDGARRDKDGY 490 (625)
T ss_pred CCCcccccccCChHHHHHHHhccCCCEEECCceEEEcCCCc
Confidence 689999999998887776 378999999999999995
No 24
>PRK07788 acyl-CoA synthetase; Validated
Probab=100.00 E-value=8.2e-50 Score=392.42 Aligned_cols=351 Identities=19% Similarity=0.218 Sum_probs=277.9
Q ss_pred CccCCCCCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEcCCChhhhhhcCccCCCC
Q 014951 1 MRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLY 80 (415)
Q Consensus 1 L~~~Gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~ 80 (415)
|.+.|+++||+|+++++|+++++++++||+++|++++|+++.++.+++.+++++++++++|++.+....+...... ...
T Consensus 91 L~~~gi~~gd~V~i~~~n~~~~~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~-~~~ 169 (549)
T PRK07788 91 LLALGVRAGDGVAVLARNHRGFVLALYAAGKVGARIILLNTGFSGPQLAEVAAREGVKALVYDDEFTDLLSALPPD-LGR 169 (549)
T ss_pred HHHcCCCCCCEEEEEcCCCHHHHHHHHHHHhcCCEEEEeCCCCCHHHHHHHHHhcCCcEEEECchhHHHHHhhccc-ccc
Confidence 4567999999999999999999999999999999999999999999999999999999999998876665443221 122
Q ss_pred ccEEEEecCCCchhhHHhhhcCceeecHHHHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEeecHHHHHHhhhhh
Q 014951 81 LKTIVSFANVSSSQKKEAEELGVSCFSWEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVD 160 (415)
Q Consensus 81 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~~~~ 160 (415)
+..++....... ........++++...... ...+...+++++++|||||||.||+|.++|+++...+....
T Consensus 170 ~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~ 240 (549)
T PRK07788 170 LRAWGGNPDDDE-------PSGSTDETLDDLIAGSST--APLPKPPKPGGIVILTSGTTGTPKGAPRPEPSPLAPLAGLL 240 (549)
T ss_pred ceEEEEecCccc-------cCCcCcccHHHHhcCCCC--CCCCCCCCCCcEEEECCCCCCCCCEEeccCccHHHHHHHHH
Confidence 233222211110 011234566766654321 11233457889999999999999999999999998877655
Q ss_pred hhhhhccccCCCCCEEEEeCChhhHHHHHHHHHhhhcCcEEEEeCC-CHHHHHHHHHhhCCeEEEeCcHHHHHHHHHHHH
Q 014951 161 QMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG-DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISN 239 (415)
Q Consensus 161 ~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~vv~~~~-~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~ 239 (415)
..+ .+..+|+++...|++|.+++...+.+++.|+++++.+. ++..+++.+++++||++.++|+++..+++....
T Consensus 241 ~~~-----~~~~~d~~~~~~p~~~~~g~~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~ 315 (549)
T PRK07788 241 SRV-----PFRAGETTLLPAPMFHATGWAHLTLAMALGSTVVLRRRFDPEATLEDIAKHKATALVVVPVMLSRILDLGPE 315 (549)
T ss_pred hhC-----CCCcCCeEEEccchHHHHHHHHHHHHHHhCCEEEECCCCCHHHHHHHHHHhCCcEEEEHHHHHHHHHhCccc
Confidence 544 67788999999999999999877788999999988765 999999999999999999999999988652211
Q ss_pred hhhcCChhhHHHHHHHHHhhhhccccCCCCCCccchhhHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHHHhcCCceE
Q 014951 240 KISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLT 319 (415)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~~G~~~~~~~~~~~~~~~~~~~~ 319 (415)
.. ...+ .+++|.+++||+++++++.+++.+.++..++
T Consensus 316 ~~-----------------------------------~~~~--------~~~lr~i~~gG~~l~~~~~~~~~~~~~~~l~ 352 (549)
T PRK07788 316 VL-----------------------------------AKYD--------TSSLKIIFVSGSALSPELATRALEAFGPVLY 352 (549)
T ss_pred cc-----------------------------------CCCC--------CCceeEEEEeCCCCCHHHHHHHHHHhCccce
Confidence 00 0000 1489999999999999999999999999999
Q ss_pred EeeccCCCCceeeeecCCcccccCcccccccCeEEEEeecCCCCCCCCCCCCCCeEEEecCCccccccCCchhhhhhhcC
Q 014951 320 QGYGLTESCSGCFTSLADVFNMIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVIVD 399 (415)
Q Consensus 320 ~~yG~tE~~~~~~~~~~~~~~~~~~~G~~~~g~~~~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gY~~~~~~~~~~~~~ 399 (415)
+.||+||++..+.....+.....+++|+|+++++++|+| +++..+ +.|+.|||+++|+.++.||+++++. ...+
T Consensus 353 ~~YG~TE~~~~~~~~~~~~~~~~~~vG~~~~~~~~~i~d-~~~~~~--~~g~~Gel~v~g~~~~~gY~~~~~~---~~~~ 426 (549)
T PRK07788 353 NLYGSTEVAFATIATPEDLAEAPGTVGRPPKGVTVKILD-ENGNEV--PRGVVGRIFVGNGFPFEGYTDGRDK---QIID 426 (549)
T ss_pred eccCcchhchhhccChhhhhhcCCCcccCCCCcEEEEEC-CCcCCC--CCCCeEEEEEeCCCccccccCCCcc---cccC
Confidence 999999998665544333233458899999999999999 776544 4579999999999999999998765 3358
Q ss_pred CceecCceEEEcCCCC
Q 014951 400 GWFHTGDIGEWQPMEL 415 (415)
Q Consensus 400 g~~~TGDlg~~d~~G~ 415 (415)
|||+|||+|++|+||+
T Consensus 427 g~~~TGDl~~~~~~g~ 442 (549)
T PRK07788 427 GLLSSGDVGYFDEDGL 442 (549)
T ss_pred CceecCceEEEcCCCC
Confidence 9999999999999985
No 25
>PLN02574 4-coumarate--CoA ligase-like
Probab=100.00 E-value=1.2e-49 Score=391.72 Aligned_cols=356 Identities=22% Similarity=0.298 Sum_probs=273.6
Q ss_pred cc-CCCCCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEcCCChhhhhhcCccCCCC
Q 014951 2 RS-RGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLY 80 (415)
Q Consensus 2 ~~-~Gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~ 80 (415)
.+ +|+++||+|+++++|++++++++|||+++|++++|++|..+.+++.++++.++++++|++.+..+.+....
T Consensus 84 ~~~~G~~~gd~V~i~~~n~~~~~~~~la~~~~G~v~v~l~p~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~------ 157 (560)
T PLN02574 84 YHVMGVRQGDVVLLLLPNSVYFPVIFLAVLSLGGIVTTMNPSSSLGEIKKRVVDCSVGLAFTSPENVEKLSPLG------ 157 (560)
T ss_pred HHHhCCCCCCEEEEECCCcchHHHHHHHHHHhCeEEeCcCcccCHHHHHHHHHhcCCEEEEECHHHHHHHHhcC------
Confidence 44 89999999999999999999999999999999999999999999999999999999999987655543211
Q ss_pred ccEEEEecCCCchhhHHhhhcCceeecHHHHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEeecHHHHHHhhhhh
Q 014951 81 LKTIVSFANVSSSQKKEAEELGVSCFSWEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVD 160 (415)
Q Consensus 81 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~~~~ 160 (415)
. .++.++...... ........++++..........+...++++++++|||||||.||+|++||+++...+..+.
T Consensus 158 ~-~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~sh~~~~~~~~~~~ 231 (560)
T PLN02574 158 V-PVIGVPENYDFD-----SKRIEFPKFYELIKEDFDFVPKPVIKQDDVAAIMYSSGTTGASKGVVLTHRNLIAMVELFV 231 (560)
T ss_pred C-cEEecCcccccc-----cCccCcccHHHHhhcCCcccccCCCCcCCEEEEEcCCCccCCCcEEEEeHHHHHHHHHHHH
Confidence 1 122222110000 0001223455554433222223345678999999999999999999999999998776543
Q ss_pred hhhhhccccCCCCCEEEEeCChhhHHHHHH-HHHhhhcCcEEEEeCC-CHHHHHHHHHhhCCeEEEeCcHHHHHHHHHHH
Q 014951 161 QMFVVTGKVCSEEDTYFSFLPLAHIYDQII-ETHCIHKGCSIGFWRG-DVRYLMEDIQELKPTMFSGVPRVYDRIYTGIS 238 (415)
Q Consensus 161 ~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~-~~~~l~~G~~vv~~~~-~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~ 238 (415)
.............++++..+|++|.+++.. ++.++..|+++++.+. ++..+++.|+++++|++.++|+++..+++...
T Consensus 232 ~~~~~~~~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~ 311 (560)
T PLN02574 232 RFEASQYEYPGSDNVYLAALPMFHIYGLSLFVVGLLSLGSTIVVMRRFDASDMVKVIDRFKVTHFPVVPPILMALTKKAK 311 (560)
T ss_pred hccccccccCCCCcEEEEecchHHHHHHHHHHHHHHhcCCEEEEecCCCHHHHHHHHHHcCCeEEecCCHHHHHHHhCcc
Confidence 211100112235688999999999999875 5567888999988876 99999999999999999999999998865211
Q ss_pred HhhhcCChhhHHHHHHHHHhhhhccccCCCCCCccchhhHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHHHhc-CCc
Q 014951 239 NKISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTS-GAP 317 (415)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~~G~~~~~~~~~~~~~~~-~~~ 317 (415)
. ....+ .+++|.+++||+++++++.+++.+.+ +.+
T Consensus 312 ~------------------------------------~~~~~--------~~~lr~~~~gg~~l~~~~~~~~~~~~~~~~ 347 (560)
T PLN02574 312 G------------------------------------VCGEV--------LKSLKQVSCGAAPLSGKFIQDFVQTLPHVD 347 (560)
T ss_pred c------------------------------------cccCc--------cccceEEEEecccCCHHHHHHHHHHCCCCc
Confidence 0 00001 13799999999999999999998887 689
Q ss_pred eEEeeccCCCCceeeeecC-CcccccCcccccccCeEEEEeecCCCCCCCCCCCCCCeEEEecCCccccccCCchhhhhh
Q 014951 318 LTQGYGLTESCSGCFTSLA-DVFNMIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEV 396 (415)
Q Consensus 318 ~~~~yG~tE~~~~~~~~~~-~~~~~~~~~G~~~~g~~~~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gY~~~~~~~~~~ 396 (415)
+++.||+||++.++..... ......+++|+|+++++++|+|.+++ .+++.|+.|||+|+|++++.||+++++.+.+.
T Consensus 348 v~~~YG~tE~~~~~~~~~~~~~~~~~~~vG~~~~~~~v~i~d~~~g--~~~~~g~~Gei~v~g~~~~~GY~~~~~~t~~~ 425 (560)
T PLN02574 348 FIQGYGMTESTAVGTRGFNTEKLSKYSSVGLLAPNMQAKVVDWSTG--CLLPPGNCGELWIQGPGVMKGYLNNPKATQST 425 (560)
T ss_pred EEecccccccCceeecCCCccccCCCCceeeeCCCcEEEEEeCCCC--cCCCCCCCeEEEEECcchhhhhcCChhHhhhh
Confidence 9999999999866543222 22234589999999999999993344 45667799999999999999999999999988
Q ss_pred h-cCCceecCceEEEcCCCC
Q 014951 397 I-VDGWFHTGDIGEWQPMEL 415 (415)
Q Consensus 397 ~-~~g~~~TGDlg~~d~~G~ 415 (415)
| .+|||+|||+|++|+||+
T Consensus 426 ~~~~g~~~TGDlg~~~~~G~ 445 (560)
T PLN02574 426 IDKDGWLRTGDIAYFDEDGY 445 (560)
T ss_pred ccCCCCcccceEEEEECCCe
Confidence 8 689999999999999985
No 26
>TIGR02316 propion_prpE propionate--CoA ligase. This family contains one of three readily separable clades of proteins in the group of acetate and propionate--CoA ligases. Characterized members of this family act on propionate. From propionyl-CoA, there is a cyclic degradation pathway: it is ligated by PrpC to the TCA cycle intermediate oxaloacetate, acted upon further by PrpD and an aconitase, then cleaved by PrpB to pyruvate and the TCA cycle intermediate succinate.
Probab=100.00 E-value=2.2e-49 Score=394.24 Aligned_cols=360 Identities=16% Similarity=0.175 Sum_probs=271.7
Q ss_pred CccCCCCCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEcCCCh---------hhhh
Q 014951 1 MRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKI---------PSIL 71 (415)
Q Consensus 1 L~~~Gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~---------~~~~ 71 (415)
|++.|+++||+|+++++|+++++++++||+++|++++|+++.++++++..++++++++++|+++... +.+.
T Consensus 100 L~~~Gv~~Gd~V~i~~~n~~e~v~~~lA~~~~Gav~vpl~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~ 179 (628)
T TIGR02316 100 LRALGVGRGDRVLIYMPMIAEAVFAMLACARIGAIHSVVFGGFASHSLALRIDDATPKLIVSADAGMRGGKVIPYKPLLD 179 (628)
T ss_pred HHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHhCCEEEecCCCCCHHHHHHHHHhcCceEEEECCccccCCcccccHHHHH
Confidence 4678999999999999999999999999999999999999999999999999999999999986431 1111
Q ss_pred hcCccCCCCccEEEEecCCCchhhHHhhhcCceeecHHHHHhcCC-CCCCCCCCCCCCeEEEEecCCCCCCCceEEeecH
Q 014951 72 SCLPRCCLYLKTIVSFANVSSSQKKEAEELGVSCFSWEEFLQLGT-LDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQ 150 (415)
Q Consensus 72 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~th~ 150 (415)
.+..........++.++....... ........+.++..... ...+.....++++++|+|||||||.||||+++|.
T Consensus 180 ~~~~~~~~~~~~vi~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ilyTSGTTG~PKgV~~sh~ 255 (628)
T TIGR02316 180 AAIAEAQHPPPHVLLVDRGLAPMR----LIPGRDVDYAALRTQHEDAQVPVEWLESNEPSYILYTSGTTGKPKGVQRDVG 255 (628)
T ss_pred HHHHhcCCCCCEEEEEeCCCCCcC----cccCccccHHHHhhccccCCCCceecCCCCcEEEEECCCCCCCCceEEECCc
Confidence 111111123445666653211000 00011234555544321 1122233567999999999999999999999999
Q ss_pred HHHHHh-hhhhhhhhhccccCCCCCEEEEeCChhhHHHHH-HHHHhhhcCcEEEEeCC-----CHHHHHHHHHhhCCeEE
Q 014951 151 AIVAEV-LSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQI-IETHCIHKGCSIGFWRG-----DVRYLMEDIQELKPTMF 223 (415)
Q Consensus 151 ~l~~~~-~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~-~~~~~l~~G~~vv~~~~-----~~~~~~~~i~~~~~t~~ 223 (415)
+++.+. ......+ .++++|++++..|++|..+.. .++.+++.|+++++.+. ++..+++.|+++++|++
T Consensus 256 ~~~~~~~~~~~~~~-----~~~~~d~~~~~~~~~~~~g~~~~~~~~L~~G~~~v~~~~~~~~~~~~~~~~~i~~~~vt~~ 330 (628)
T TIGR02316 256 GYAVALALSMWAIF-----GIRAGQVMFSASDVGWVVGHSYIVYAPLLAGAATVLYEGLPTNPDPGVWWSIVERYGVRTM 330 (628)
T ss_pred HHHHHHHHHHHHhc-----CCCCCcEEEEcCCCCeeehhhHHHHHHHhccceEEEeCCCCCCCCHHHHHHHHHHhCCeEE
Confidence 986443 3333333 677899999999999998875 47788999999998763 78999999999999999
Q ss_pred EeCcHHHHHHHHHHHHhhhcCChhhHHHHHHHHHhhhhccccCCCCCCccchhhHHHHHHHHHHhCCceeEEEEecCCCC
Q 014951 224 SGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLP 303 (415)
Q Consensus 224 ~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~~G~~~~ 303 (415)
+++|++++.+.+.... .....++ ++||.+++||++++
T Consensus 331 ~~~P~~~~~l~~~~~~-----------------------------------~~~~~~l--------~~lr~~~~gGe~l~ 367 (628)
T TIGR02316 331 FSAPTAIRVLKKQDAA-----------------------------------WLRKHDL--------SSLHWLFLAGEPLD 367 (628)
T ss_pred EeCHHHHHHHHhcCCc-----------------------------------ccccCCc--------cceeEEEEecCCCC
Confidence 9999999887541100 0001111 48999999999999
Q ss_pred HHHHHHHHHhcCCceEEeeccCCCCceeeeecCC---cccccCcccccccCeEEEEeecC-CCCCCCCCCCCCCeEEEec
Q 014951 304 IHVEEFLRVTSGAPLTQGYGLTESCSGCFTSLAD---VFNMIGTVGVPMTTVEARLESVP-EMGYDALSSVPRGEICLRG 379 (415)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~~---~~~~~~~~G~~~~g~~~~i~~~~-~~~~~~~~~~~~Gel~v~~ 379 (415)
+++.+++++.++..+++.||+||++..++..... .....+++|+|++|++++|+| + ++. +++.++.|||+++|
T Consensus 368 ~~~~~~~~~~~~~~~~~~yG~TE~~~~~~~~~~~~~~~~~~~gs~G~p~~g~~v~i~d-~~~g~--~~~~g~~Gel~v~g 444 (628)
T TIGR02316 368 EPTAHWITDGLGKPVIDNYWQTETGWPVLAIMPGLDLKPVKLGSPGLPMYGYHLRVLD-EATGR--PCGPNEKGVLTVVP 444 (628)
T ss_pred HHHHHHHHHHhCCCEEecccccccCceeecCCCCCCcCCCCCCCcccCcCCceEEEEE-CCCCC--CCCCCCcEEEEEec
Confidence 9999999998999999999999998644332221 122348899999999999999 5 454 44567999999999
Q ss_pred C---CccccccCCchhhhhhh----cCCceecCceEEEcCCCC
Q 014951 380 N---TLFSGYYKRPDLTEEVI----VDGWFHTGDIGEWQPMEL 415 (415)
Q Consensus 380 ~---~~~~gY~~~~~~~~~~~----~~g~~~TGDlg~~d~~G~ 415 (415)
| +++.|||++++.+.+.+ .++||+|||+|++|+||+
T Consensus 445 p~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~g~~d~dG~ 487 (628)
T TIGR02316 445 PLPPGCLSTVWGDDARFLKTYWSHFKRPLYSSFDWGIRDEDGY 487 (628)
T ss_pred CCCccccccccCChHHHHHhhhhcCCCCEEECCceEEEcCCCc
Confidence 8 57899999998777654 477999999999999996
No 27
>PRK00174 acetyl-CoA synthetase; Provisional
Probab=100.00 E-value=3.6e-49 Score=393.83 Aligned_cols=359 Identities=19% Similarity=0.273 Sum_probs=275.4
Q ss_pred CccCCCCCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEcCCCh---------hhhh
Q 014951 1 MRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKI---------PSIL 71 (415)
Q Consensus 1 L~~~Gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~---------~~~~ 71 (415)
|++.|+++||+|+++++|++++++++|||+++|++++|+++.++.+++.+++++++++++|+++... +.+.
T Consensus 115 L~~~Gv~~gd~V~i~~~n~~e~~~~~lA~~~~Gav~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~ 194 (637)
T PRK00174 115 LKSLGVKKGDRVAIYMPMIPEAAVAMLACARIGAVHSVVFGGFSAEALADRIIDAGAKLVITADEGVRGGKPIPLKANVD 194 (637)
T ss_pred HHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCCcEEEEcCccccCCcccchHHHHH
Confidence 4578999999999999999999999999999999999999999999999999999999999987542 1121
Q ss_pred hcCccCCCCccEEEEecCCCchhhHHhhhcCceeecHHHHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEeecHH
Q 014951 72 SCLPRCCLYLKTIVSFANVSSSQKKEAEELGVSCFSWEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQA 151 (415)
Q Consensus 72 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~th~~ 151 (415)
..... .+..+.++.++....... ........++++..............++++++|+|||||||.||+|+++|.+
T Consensus 195 ~~~~~-~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~s~~~ 269 (637)
T PRK00174 195 EALAN-CPSVEKVIVVRRTGGDVD----WVEGRDLWWHELVAGASDECEPEPMDAEDPLFILYTSGSTGKPKGVLHTTGG 269 (637)
T ss_pred HHHHh-CCCccEEEEEcCCCCCcC----cCCCCcccHHHHHhhcCCCCCccccCCCCcEEEEECCCCCCCCceEEeCcch
Confidence 11111 134455655543211000 0001123355555432222233345678999999999999999999999999
Q ss_pred HHHHhhhh-hhhhhhccccCCCCCEEEEeCChhhHHHHHH-HHHhhhcCcEEEEeCC-----CHHHHHHHHHhhCCeEEE
Q 014951 152 IVAEVLSV-DQMFVVTGKVCSEEDTYFSFLPLAHIYDQII-ETHCIHKGCSIGFWRG-----DVRYLMEDIQELKPTMFS 224 (415)
Q Consensus 152 l~~~~~~~-~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~-~~~~l~~G~~vv~~~~-----~~~~~~~~i~~~~~t~~~ 224 (415)
++...... ...+ .+..+|++++..|++|..+... ++.+++.|+++++.+. ++..+++.|+++++|++.
T Consensus 270 ~~~~~~~~~~~~~-----~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~~~i~~~~vt~~~ 344 (637)
T PRK00174 270 YLVYAAMTMKYVF-----DYKDGDVYWCTADVGWVTGHSYIVYGPLANGATTLMFEGVPNYPDPGRFWEVIDKHKVTIFY 344 (637)
T ss_pred hHHHHHHHHHhcc-----CCCCCcEEEEcCCchHhhhhHHHHHHHHHcCCEEEEECCCCCCCChHHHHHHHHhcCCeEEe
Confidence 87654332 2223 6678899999999999988764 7788999999998753 789999999999999999
Q ss_pred eCcHHHHHHHHHHHHhhhcCChhhHHHHHHHHHhhhhccccCCCCCCccchhhHHHHHHHHHHhCCceeEEEEecCCCCH
Q 014951 225 GVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPI 304 (415)
Q Consensus 225 ~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~~G~~~~~ 304 (415)
++|++++.+++..... ....++ ++||.++++|+++++
T Consensus 345 ~~P~~~~~l~~~~~~~-----------------------------------~~~~~~--------~~lr~i~~~Ge~l~~ 381 (637)
T PRK00174 345 TAPTAIRALMKEGDEH-----------------------------------PKKYDL--------SSLRLLGSVGEPINP 381 (637)
T ss_pred ecHHHHHHHHhcCCcc-----------------------------------cccCCc--------cceeEEEEeCCCCCH
Confidence 9999999876521000 000011 389999999999999
Q ss_pred HHHHHHHHhcC---CceEEeeccCCCCceeeeecCCc-ccccCcccccccCeEEEEeecCCCCCCCCCCCCCCeEEEec-
Q 014951 305 HVEEFLRVTSG---APLTQGYGLTESCSGCFTSLADV-FNMIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRG- 379 (415)
Q Consensus 305 ~~~~~~~~~~~---~~~~~~yG~tE~~~~~~~~~~~~-~~~~~~~G~~~~g~~~~i~~~~~~~~~~~~~~~~Gel~v~~- 379 (415)
++.+++.+.++ +++++.||+||++..+....+.. ..+.+++|+|++|++++|+| +++..+ +.|+.|||+++|
T Consensus 382 ~~~~~~~~~~~~~~~~i~~~YG~TE~~~~~~~~~~~~~~~~~~~vG~p~~g~~~~i~d-~~g~~~--~~g~~Gel~v~g~ 458 (637)
T PRK00174 382 EAWEWYYKVVGGERCPIVDTWWQTETGGIMITPLPGATPLKPGSATRPLPGIQPAVVD-EEGNPL--EGGEGGNLVIKDP 458 (637)
T ss_pred HHHHHHHHHhCCCCCceEecccccccCCceEecCCCCCCcCCCcccCCCCCceEEEEC-CCCCCC--CCCCcEEEEEcCC
Confidence 99999998876 68999999999988665443322 22347899999999999999 777544 456999999999
Q ss_pred -CCccccccCCchhhhhhh---cCCceecCceEEEcCCCC
Q 014951 380 -NTLFSGYYKRPDLTEEVI---VDGWFHTGDIGEWQPMEL 415 (415)
Q Consensus 380 -~~~~~gY~~~~~~~~~~~---~~g~~~TGDlg~~d~~G~ 415 (415)
|+++.|||++++.+.+.+ .+|||+|||+|++|+||+
T Consensus 459 ~p~~~~gy~~~~~~~~~~~~~~~~g~~~TGDl~~~d~dG~ 498 (637)
T PRK00174 459 WPGMMRTIYGDHERFVKTYFSTFKGMYFTGDGARRDEDGY 498 (637)
T ss_pred CCcccccccCCHHHHHHhhhcCCCCEEECCceEEEcCCCc
Confidence 689999999999887765 479999999999999995
No 28
>PRK13295 cyclohexanecarboxylate-CoA ligase; Reviewed
Probab=100.00 E-value=1.9e-48 Score=382.34 Aligned_cols=347 Identities=24% Similarity=0.322 Sum_probs=275.8
Q ss_pred CccCCCCCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEcCCCh-----hhhhhcCc
Q 014951 1 MRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKI-----PSILSCLP 75 (415)
Q Consensus 1 L~~~Gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~-----~~~~~~~~ 75 (415)
|.+.|+++||+|+++++|++++++++|||+++|++++|++|.++.+++.++++.++++++|++++.. +.+.....
T Consensus 72 L~~~g~~~g~~Val~~~n~~e~~~~~la~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~ 151 (547)
T PRK13295 72 LARLGVGRGDVVSCQLPNWWEFTVLYLACSRIGAVLNPLMPIFRERELSFMLKHAESKVLVVPKTFRGFDHAAMARRLRP 151 (547)
T ss_pred HHHhCCCCCCEEEEECCCChHHHHHHHHHHhcCcEEeccccccCHHHHHHHHHhcCceEEEEeccccCcchHHHHHHHhh
Confidence 3567999999999999999999999999999999999999999999999999999999999987642 11211111
Q ss_pred cCCCCccEEEEecCCCchhhHHhhhcCceeecHHHHHhcC--------CCCCCCCCCCCCCeEEEEecCCCCCCCceEEe
Q 014951 76 RCCLYLKTIVSFANVSSSQKKEAEELGVSCFSWEEFLQLG--------TLDCELPPKKKTNISTIMYTSGTTGEPKGVVL 147 (415)
Q Consensus 76 ~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~ 147 (415)
..+..+.++.++... ..++.++.... ..........++++++++|||||||.||+|++
T Consensus 152 -~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~ 217 (547)
T PRK13295 152 -ELPALRHVVVVGGDG-------------ADSFEALLITPAWEQEPDAPAILARLRPGPDDVTQLIYTSGTTGEPKGVMH 217 (547)
T ss_pred -hCCCcceEEEecCCC-------------ccCHHHHhhCCccccccccccccccCCCCCcceeEEEeCCCCCCCCCEEEe
Confidence 123445555554321 11233322111 00111123456899999999999999999999
Q ss_pred ecHHHHHHhhhhhhhhhhccccCCCCCEEEEeCChhhHHHHHH-HHHhhhcCcEEEEeCC-CHHHHHHHHHhhCCeEEEe
Q 014951 148 TNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQII-ETHCIHKGCSIGFWRG-DVRYLMEDIQELKPTMFSG 225 (415)
Q Consensus 148 th~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~-~~~~l~~G~~vv~~~~-~~~~~~~~i~~~~~t~~~~ 225 (415)
+|.++...+......+ .+..++++++..|++|..++.. ++.+++.|+++++.+. ++..+++.++++++|++.+
T Consensus 218 s~~~l~~~~~~~~~~~-----~~~~~~~~l~~~p~~h~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~l~~~~vt~~~~ 292 (547)
T PRK13295 218 TANTLMANIVPYAERL-----GLGADDVILMASPMAHQTGFMYGLMMPVMLGATAVLQDIWDPARAAELIRTEGVTFTMA 292 (547)
T ss_pred ccHHHHHHHHHHHHHh-----CCCCCCeEEEecCchhhhhHHHHHHHHHHcCCeEEeCCCCCHHHHHHHHHHcCCcEEEe
Confidence 9999998887766555 6788999999999999998775 7788999999998876 9999999999999999999
Q ss_pred CcHHHHHHHHHHHHhhhcCChhhHHHHHHHHHhhhhccccCCCCCCccchhhHHHHHHHHHHhCCceeEEEEecCCCCHH
Q 014951 226 VPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIH 305 (415)
Q Consensus 226 ~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~~G~~~~~~ 305 (415)
+|+++..+....... ..+ .+++|.+++||++++++
T Consensus 293 ~p~~~~~l~~~~~~~-------------------------------------~~~--------~~~l~~~~~~G~~l~~~ 327 (547)
T PRK13295 293 STPFLTDLTRAVKES-------------------------------------GRP--------VSSLRTFLCAGAPIPGA 327 (547)
T ss_pred cHHHHHHHHhccccc-------------------------------------CCC--------cccceEEEEecCCCCHH
Confidence 999998876421100 000 13799999999999999
Q ss_pred HHHHHHHhcCCceEEeeccCCCCceeeeecCCc-ccccCcccccccCeEEEEeecCCCCCCCCCCCCCCeEEEecCCccc
Q 014951 306 VEEFLRVTSGAPLTQGYGLTESCSGCFTSLADV-FNMIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFS 384 (415)
Q Consensus 306 ~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~~~-~~~~~~~G~~~~g~~~~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~ 384 (415)
+.+++.+.++.++++.||+||++.+........ .....++|+|+++++++|+| +++. +++.|+.|||+|+|+.++.
T Consensus 328 ~~~~~~~~~~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~i~d-~~~~--~~~~g~~Gel~v~g~~~~~ 404 (547)
T PRK13295 328 LVERARAALGAKIVSAWGMTENGAVTLTKLDDPDERASTTDGCPLPGVEVRVVD-ADGA--PLPAGQIGRLQVRGCSNFG 404 (547)
T ss_pred HHHHHHHHhCCCeEEeccCCCCCCeeeccCCCcchhccCccccccCCcEEEEEC-CCCC--CCCCCCCCeEEEEcCcccc
Confidence 999999989999999999999987655443322 22346889999999999999 6664 4456799999999999999
Q ss_pred cccCCchhhhhhhcCCceecCceEEEcCCCC
Q 014951 385 GYYKRPDLTEEVIVDGWFHTGDIGEWQPMEL 415 (415)
Q Consensus 385 gY~~~~~~~~~~~~~g~~~TGDlg~~d~~G~ 415 (415)
||+++++.+... .+|||+|||+|++|+||+
T Consensus 405 gY~~~~~~t~~~-~~g~~~TGD~~~~~~~g~ 434 (547)
T PRK13295 405 GYLKRPQLNGTD-ADGWFDTGDLARIDADGY 434 (547)
T ss_pred cccCCccccccC-CCCCeecceEEEEcCCce
Confidence 999999988776 688999999999999985
No 29
>PRK12582 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=1.5e-48 Score=388.09 Aligned_cols=344 Identities=20% Similarity=0.344 Sum_probs=256.2
Q ss_pred CccCCCCCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCCCCCH-----HHHHHHHHhcCceEEEEcCCC-hhhhhhcC
Q 014951 1 MRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGA-----NAVEFIINHAEVSIAFVQENK-IPSILSCL 74 (415)
Q Consensus 1 L~~~Gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~-----~~l~~~l~~~~~~~ii~~~~~-~~~~~~~~ 74 (415)
|++.|+++||+|+++++|+++++++++||+++|++++|++|.++. +++.++++.++++++|+++.. ........
T Consensus 97 L~~~Gv~~gd~V~i~~~n~~e~~~~~lA~~~~G~v~vpl~p~~~~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~ 176 (624)
T PRK12582 97 LLDLGLDPGRPVMILSGNSIEHALMTLAAMQAGVPAAPVSPAYSLMSHDHAKLKHLFDLVKPRVVFAQSGAPFARALAAL 176 (624)
T ss_pred HHHcCCCCCCEEEEecCCCHHHHHHHHHHHHcCCeEeeccCccccccCCHHHHHHHHHhcCCcEEEecCHHHHHHHHHhh
Confidence 456899999999999999999999999999999999999999885 899999999999999998642 12212111
Q ss_pred ccCCCCccEEEEecCCCchhhHHhhhcCceeecHHHHHhcCCCC---CCCCCCCCCCeEEEEecCCCCCCCceEEeecHH
Q 014951 75 PRCCLYLKTIVSFANVSSSQKKEAEELGVSCFSWEEFLQLGTLD---CELPPKKKTNISTIMYTSGTTGEPKGVVLTNQA 151 (415)
Q Consensus 75 ~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~i~~TSGtTG~pK~v~~th~~ 151 (415)
.. ... .++.++.... ......++++....... .......++++++|+|||||||.||||++||++
T Consensus 177 ~~--~~~-~~i~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~yTSGTTG~PKgV~~th~~ 244 (624)
T PRK12582 177 DL--LDV-TVVHVTGPGE---------GIASIAFADLAATPPTAAVAAAIAAITPDTVAKYLFTSGSTGMPKAVINTQRM 244 (624)
T ss_pred hh--cCc-eEEEEcCCCc---------ccccccHHHHhhcCCcchhhhhhccCCCCceEEEEEcCCCCCCCceEEeeHHH
Confidence 11 112 2333332110 01123445544322111 111234678999999999999999999999999
Q ss_pred HHHHhhhhhhhhhhccccCCCCCEEEEeCChhhHHHHHH-HHHhhhcCcEEEEeCC--C---HHHHHHHHHhhCCeEEEe
Q 014951 152 IVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQII-ETHCIHKGCSIGFWRG--D---VRYLMEDIQELKPTMFSG 225 (415)
Q Consensus 152 l~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~-~~~~l~~G~~vv~~~~--~---~~~~~~~i~~~~~t~~~~ 225 (415)
+..+.......+... .-...+++++++|++|.+++.. ++.++..|+++++.+. + ...+++.++++++|++++
T Consensus 245 l~~~~~~~~~~~~~~--~~~~~~~~l~~lPl~h~~g~~~~~~~~l~~G~tvvl~~~~~~~~~~~~~~~~i~~~~~t~~~~ 322 (624)
T PRK12582 245 MCANIAMQEQLRPRE--PDPPPPVSLDWMPWNHTMGGNANFNGLLWGGGTLYIDDGKPLPGMFEETIRNLREISPTVYGN 322 (624)
T ss_pred HHHHHHHHHHhcccc--CCCCCceEEEechHHHHHhHHHHHHHHHhCceEEEEcCCCcccchHHHHHHHHHhcCCeEEec
Confidence 998776553332110 0013589999999999999875 5677899999988753 2 345677889999999999
Q ss_pred CcHHHHHHHHHHHHhhhcCChhhHHHHHHHHHhhhhccccCCCCCCccchhhHHHHHHHHHHhCCceeEEEEecCCCCHH
Q 014951 226 VPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIH 305 (415)
Q Consensus 226 ~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~~G~~~~~~ 305 (415)
+|.++..+++.+... +.....+ .++||.+++||++++++
T Consensus 323 vP~~~~~l~~~~~~~---------------------------------~~~~~~~--------~~slr~i~~gGa~l~~~ 361 (624)
T PRK12582 323 VPAGYAMLAEAMEKD---------------------------------DALRRSF--------FKNLRLMAYGGATLSDD 361 (624)
T ss_pred cCHHHHHHHHHHhhC---------------------------------HHHHHHH--------hhheeEEEecCCCCCHH
Confidence 999999886533210 0011111 14899999999999999
Q ss_pred HHHHHHHhc------CCceEEeeccCCCCceeeeecCCcccccCcccccccCeEEEEeecCCCCCCCCCCCCCCeEEEec
Q 014951 306 VEEFLRVTS------GAPLTQGYGLTESCSGCFTSLADVFNMIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRG 379 (415)
Q Consensus 306 ~~~~~~~~~------~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~G~~~~g~~~~i~~~~~~~~~~~~~~~~Gel~v~~ 379 (415)
+.+++.+.+ ++++++.||+||++.++...... ..+.+++|+|+||++++|++ .|+.|||+|+|
T Consensus 362 ~~~~~~~~~~~~~g~~~~l~~~YG~TE~~~~~~~~~~~-~~~~~svG~p~pg~~v~i~~----------~G~~GEl~vrg 430 (624)
T PRK12582 362 LYERMQALAVRTTGHRIPFYTGYGATETAPTTTGTHWD-TERVGLIGLPLPGVELKLAP----------VGDKYEVRVKG 430 (624)
T ss_pred HHHHHHHHHHhhcCCCceEEeccccccccceeecccCC-CCCCCCCCcCCCCcEEEEcc----------CCCceEEEEEC
Confidence 999998753 36799999999998765533222 23458999999999999975 34789999999
Q ss_pred CCccccccCCchhhhhhh-cCCceecCceEEE
Q 014951 380 NTLFSGYYKRPDLTEEVI-VDGWFHTGDIGEW 410 (415)
Q Consensus 380 ~~~~~gY~~~~~~~~~~~-~~g~~~TGDlg~~ 410 (415)
++++.|||++|+.+.+.| .+|||+|||+|++
T Consensus 431 ~~v~~GY~~~p~~t~~~f~~dgw~~TGDlg~~ 462 (624)
T PRK12582 431 PNVTPGYHKDPELTAAAFDEEGFYRLGDAARF 462 (624)
T ss_pred CcccccccCCccchhhhcCccCCccccceEEe
Confidence 999999999999999999 6899999999998
No 30
>PRK07656 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=4.5e-48 Score=377.68 Aligned_cols=355 Identities=24% Similarity=0.410 Sum_probs=288.2
Q ss_pred CccCCCCCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEcCCChhhhhhcCccCCCC
Q 014951 1 MRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLY 80 (415)
Q Consensus 1 L~~~Gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~ 80 (415)
|.+.|+++||+|+++++|+++++++++||+++|++++|+++..+.+++..++++++++++|+++............ ...
T Consensus 47 L~~~gv~~g~~V~l~~~~~~~~~~~~la~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~-~~~ 125 (513)
T PRK07656 47 LAALGIGKGDRVAIWAPNSPHWVIAALGALKAGAVVVPLNTRYTADEAAYILARGDAKALFVLGLFLGVDYSATTR-LPA 125 (513)
T ss_pred HHHcCCCCCCEEEEECCCChHHHHHHHHHHhcCeEEEecCcccCHHHHHHHHhhcCceEEEEchhhHHHHHHHHhc-cCC
Confidence 3567999999999999999999999999999999999999999999999999999999999998876655443322 234
Q ss_pred ccEEEEecCCCchhhHHhhhcCceeecHHHHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEeecHHHHHHhhhhh
Q 014951 81 LKTIVSFANVSSSQKKEAEELGVSCFSWEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVD 160 (415)
Q Consensus 81 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~~~~ 160 (415)
.+.++......... .......|+++..............++++++++|||||||.||+|.++|.++...+....
T Consensus 126 ~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~ 199 (513)
T PRK07656 126 LEHVVICETEEDDP------HTEKMKTFTDFLAAGDPAERAPEVDPDDVADILFTSGTTGRPKGAMLTHRQLLSNAADWA 199 (513)
T ss_pred ccEEEEEcCccccc------CccccccHHHHHhcCCCCCCcCCCCCCceEEEEeCCCCCCCCCEEEEecHHHHHHHHHHH
Confidence 44555443322110 001234566665543322334456789999999999999999999999999998887766
Q ss_pred hhhhhccccCCCCCEEEEeCChhhHHHHHH-HHHhhhcCcEEEEeCC-CHHHHHHHHHhhCCeEEEeCcHHHHHHHHHHH
Q 014951 161 QMFVVTGKVCSEEDTYFSFLPLAHIYDQII-ETHCIHKGCSIGFWRG-DVRYLMEDIQELKPTMFSGVPRVYDRIYTGIS 238 (415)
Q Consensus 161 ~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~-~~~~l~~G~~vv~~~~-~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~ 238 (415)
..+ .++.+|++++.+|++|.+++.. ++.+++.|+++++.+. ++..+++.|+++++|++.++|+++..+.+...
T Consensus 200 ~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~ 274 (513)
T PRK07656 200 EYL-----GLTEGDRYLAANPFFHVFGYKAGVNAPLMRGATILPLPVFDPDEVFRLIETERITVLPGPPTMYNSLLQHPD 274 (513)
T ss_pred Hhh-----CCCCCCeEEEccchHHHHHHHHHHHHHHHcCceEEecCcCCHHHHHHHHHHhCCeEEechHHHHHHHHcCCC
Confidence 655 7788999999999999999875 6788999999988766 99999999999999999999999998865211
Q ss_pred HhhhcCChhhHHHHHHHHHhhhhccccCCCCCCccchhhHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHHHhcCC-c
Q 014951 239 NKISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGA-P 317 (415)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~~G~~~~~~~~~~~~~~~~~-~ 317 (415)
. ...++ +++|.+++||+++++++.+++.+.++. .
T Consensus 275 ~-------------------------------------~~~~~--------~~l~~v~~~g~~~~~~~~~~~~~~~~~~~ 309 (513)
T PRK07656 275 R-------------------------------------SAEDL--------SSLRLAVTGAASMPVALLERFESELGVDI 309 (513)
T ss_pred c-------------------------------------CCCCc--------cceeeEEecCCCCCHHHHHHHHHHcCCCc
Confidence 0 00011 389999999999999999999999998 9
Q ss_pred eEEeeccCCCCceeeeecCCcccc--cCcccccccCeEEEEeecCCCCCCCCCCCCCCeEEEecCCccccccCCchhhhh
Q 014951 318 LTQGYGLTESCSGCFTSLADVFNM--IGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEE 395 (415)
Q Consensus 318 ~~~~yG~tE~~~~~~~~~~~~~~~--~~~~G~~~~g~~~~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gY~~~~~~~~~ 395 (415)
+++.||+||++++...+....... .+++|.|+++++++|+| +++. +++.|+.|||+++|+.++.||++++..+..
T Consensus 310 ~~~~YG~tE~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~i~d-~~~~--~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~ 386 (513)
T PRK07656 310 VLTGYGLSEASGVTTFNRLDDDRKTVAGTIGTAIAGVENKIVN-ELGE--EVPVGEVGELLVRGPNVMKGYYDDPEATAA 386 (513)
T ss_pred eEeEEccccCCCceeecCccccccccCCCccccCCCcEEEEEC-CCCC--CCCCCCceEEEEEcchhhhhhcCCHHHHhh
Confidence 999999999987776555443322 58899999999999999 6664 445669999999999999999999999888
Q ss_pred hhc-CCceecCceEEEcCCCC
Q 014951 396 VIV-DGWFHTGDIGEWQPMEL 415 (415)
Q Consensus 396 ~~~-~g~~~TGDlg~~d~~G~ 415 (415)
.+. +|||+|||+|++|++|+
T Consensus 387 ~~~~~~~~~tGDl~~~~~~g~ 407 (513)
T PRK07656 387 AIDADGWLHTGDLGRLDEEGY 407 (513)
T ss_pred hhccCCceeccceEEEcCCee
Confidence 885 99999999999999884
No 31
>PRK09274 peptide synthase; Provisional
Probab=100.00 E-value=3.9e-48 Score=380.89 Aligned_cols=344 Identities=20% Similarity=0.234 Sum_probs=261.7
Q ss_pred CccCCCCCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEcCC--ChhhhhhcCccCC
Q 014951 1 MRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQEN--KIPSILSCLPRCC 78 (415)
Q Consensus 1 L~~~Gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~ii~~~~--~~~~~~~~~~~~~ 78 (415)
|.+.|+++||+|+++++|+++++++++||+++|++++|++|.++.+++.+++++++++++|++.+ ....+.... .
T Consensus 58 L~~~g~~~gd~V~~~~~n~~~~~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~~~~~---~ 134 (552)
T PRK09274 58 LNAAGIGRGMRAVLMVTPSLEFFALTFALFKAGAVPVLVDPGMGIKNLKQCLAEAQPDAFIGIPKAHLARRLFGWG---K 134 (552)
T ss_pred HHHcCCCCCCEEEEEeCCcHHHHHHHHHHHHcCeEEEEcCCCccHHHHHHHHHhcCCCEEEeccHHHHHHHHhccC---c
Confidence 45689999999999999999999999999999999999999999999999999999999998752 112111111 0
Q ss_pred CCccEEEEecCCCchhhHHhhhcCceeecHHHHHhcC-CCCCCCCCCCCCCeEEEEecCCCCCCCceEEeecHHHHHHhh
Q 014951 79 LYLKTIVSFANVSSSQKKEAEELGVSCFSWEEFLQLG-TLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVL 157 (415)
Q Consensus 79 ~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~ 157 (415)
...+.++.++... ......++++.... ..........++++++++|||||||.||+|++||.++...+.
T Consensus 135 ~~~~~~i~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~ 204 (552)
T PRK09274 135 PSVRRLVTVGGRL----------LWGGTTLATLLRDGAAAPFPMADLAPDDMAAILFTSGSTGTPKGVVYTHGMFEAQIE 204 (552)
T ss_pred cchhheecccccc----------ccCCccHHHhcccCccccCCCCCCCCCCeEEEEECCCCCCCCceEEecHHHHHHHHH
Confidence 1222233322110 00112334433111 112223345678999999999999999999999999999888
Q ss_pred hhhhhhhhccccCCCCCEEEEeCChhhHHHHHHHHHhhhcCcEEEEeC--------CCHHHHHHHHHhhCCeEEEeCcHH
Q 014951 158 SVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWR--------GDVRYLMEDIQELKPTMFSGVPRV 229 (415)
Q Consensus 158 ~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~vv~~~--------~~~~~~~~~i~~~~~t~~~~~P~~ 229 (415)
.....+ .+..+|+.++..|++|.+++ ..|+++++.+ .++..+++.|+++++|+++++|++
T Consensus 205 ~~~~~~-----~~~~~~~~~~~~pl~~~~~~-------~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~ 272 (552)
T PRK09274 205 ALREDY-----GIEPGEIDLPTFPLFALFGP-------ALGMTSVIPDMDPTRPATVDPAKLFAAIERYGVTNLFGSPAL 272 (552)
T ss_pred HHHHHh-----CCCCCceeeeccCHHHhhhh-------hhCCeEEecCcccccccccCHHHHHHHHHHcCCeEEeccHHH
Confidence 776665 67788999999999876543 4577776653 278999999999999999999999
Q ss_pred HHHHHHHHHHhhhcCChhhHHHHHHHHHhhhhccccCCCCCCccchhhHHHHHHHHHHhCCceeEEEEecCCCCHHHHHH
Q 014951 230 YDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEF 309 (415)
Q Consensus 230 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~~G~~~~~~~~~~ 309 (415)
++.+.+...... .+ .+++|.+++||+++++++.++
T Consensus 273 ~~~l~~~~~~~~-------------------------------------~~--------~~~lr~~~~gG~~~~~~~~~~ 307 (552)
T PRK09274 273 LERLGRYGEANG-------------------------------------IK--------LPSLRRVISAGAPVPIAVIER 307 (552)
T ss_pred HHHHHHHhhhcC-------------------------------------CC--------CchhhEEEecCCcCCHHHHHH
Confidence 999876321100 00 137999999999999999999
Q ss_pred HHHhc--CCceEEeeccCCCCceeeeecCC---------cccccCcccccccCeEEEEeecCCC-------CCCCCCCCC
Q 014951 310 LRVTS--GAPLTQGYGLTESCSGCFTSLAD---------VFNMIGTVGVPMTTVEARLESVPEM-------GYDALSSVP 371 (415)
Q Consensus 310 ~~~~~--~~~~~~~yG~tE~~~~~~~~~~~---------~~~~~~~~G~~~~g~~~~i~~~~~~-------~~~~~~~~~ 371 (415)
+++.+ +.++++.||+||++.++...... ......++|+|+++++++|+| +++ ...+++.|+
T Consensus 308 ~~~~~~~~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~ivd-~~~~~~~~~~~~~~~~~g~ 386 (552)
T PRK09274 308 FRAMLPPDAEILTPYGATEALPISSIESREILFATRAATDNGAGICVGRPVDGVEVRIIA-ISDAPIPEWDDALRLATGE 386 (552)
T ss_pred HHHHcCCCceEEccccccccceeEeecchhhhccccccccCCCCcccCccCCCceEEEEe-ccccccccccccccCCCCC
Confidence 99988 46999999999998766543221 011124789999999999998 422 224567789
Q ss_pred CCeEEEecCCccccccCCchhhhhhh---cCC--ceecCceEEEcCCCC
Q 014951 372 RGEICLRGNTLFSGYYKRPDLTEEVI---VDG--WFHTGDIGEWQPMEL 415 (415)
Q Consensus 372 ~Gel~v~~~~~~~gY~~~~~~~~~~~---~~g--~~~TGDlg~~d~~G~ 415 (415)
.|||+++|+.++.|||++++.+...| .+| ||+|||+|++|+||+
T Consensus 387 ~Gel~v~g~~~~~GY~~~~~~t~~~~~~~~~g~~w~~TGDlg~~d~dG~ 435 (552)
T PRK09274 387 IGEIVVAGPMVTRSYYNRPEATRLAKIPDGQGDVWHRMGDLGYLDAQGR 435 (552)
T ss_pred eeEEEEecCcccccccCChHHhhhhhcccCCCCcEEEcCCEEEEccCCc
Confidence 99999999999999999999998876 356 999999999999985
No 32
>PRK13382 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=8.3e-48 Score=376.68 Aligned_cols=346 Identities=19% Similarity=0.236 Sum_probs=270.7
Q ss_pred CccCCCCCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEcCCChhhhhhcCccCCCC
Q 014951 1 MRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLY 80 (415)
Q Consensus 1 L~~~Gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~ 80 (415)
|.+.|+++||+|+++++|+++++++++||+++|++++|+++.++.+++.++++.++++++|++.+....+....... +.
T Consensus 85 L~~~g~~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~-~~ 163 (537)
T PRK13382 85 LQALPIGEPRVVGIMCRNHRGFVEALLAANRIGADILLLNTSFAGPALAEVVTREGVDTVIYDEEFSATVDRALADC-PQ 163 (537)
T ss_pred HHHcCCCCCCEEEEEecCcHHHHHHHHHHHHcCcEEEecCcccCHHHHHHHHHhcCCCEEEEchhhHHHHHHHHhhc-cc
Confidence 35679999999999999999999999999999999999999999999999999999999999987665544322211 22
Q ss_pred ccEEEEecCCCchhhHHhhhcCceeecHHHHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEeecHHHHHHhhhhh
Q 014951 81 LKTIVSFANVSSSQKKEAEELGVSCFSWEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVD 160 (415)
Q Consensus 81 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~~~~ 160 (415)
...++.+.... ....++++....... .+...+++.++++|||||||.||+|.++|.++........
T Consensus 164 ~~~~~~~~~~~------------~~~~~~~~~~~~~~~--~~~~~~~~~~~il~TSGTTG~PKgv~~s~~~~~~~~~~~~ 229 (537)
T PRK13382 164 ATRIVAWTDED------------HDLTVEVLIAAHAGQ--RPEPTGRKGRVILLTSGTTGTPKGARRSGPGGIGTLKAIL 229 (537)
T ss_pred cceEEEecCCc------------ccccHHHHhhccCcC--CCCCCCCCCeEEEECCCCCCCCCEEEeccchHHHHHHHHH
Confidence 22333332211 012334343322111 1223468899999999999999999999998887776655
Q ss_pred hhhhhccccCCCCCEEEEeCChhhHHHHHHHHHhhhcCcEEEEeCC-CHHHHHHHHHhhCCeEEEeCcHHHHHHHHHHHH
Q 014951 161 QMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG-DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISN 239 (415)
Q Consensus 161 ~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~vv~~~~-~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~ 239 (415)
..+ .+..+++++...|++|.+++...+.++..|+++++.+. ++..+++.|+++++|++.++|++++.+++....
T Consensus 230 ~~~-----~~~~~~~~l~~~p~~~~~g~~~~~~~l~~g~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~ 304 (537)
T PRK13382 230 DRT-----PWRAEEPTVIVAPMFHAWGFSQLVLAASLACTIVTRRRFDPEATLDLIDRHRATGLAVVPVMFDRIMDLPAE 304 (537)
T ss_pred Hhh-----CCCCCCeEEEecChHhhhHHHHHHHHHhcCcEEEECCCcCHHHHHHHHHHhCCEEEEehHHHHHHHHcCCch
Confidence 544 56788999999999999998778888899999988765 999999999999999999999999987641100
Q ss_pred hhhcCChhhHHHHHHHHHhhhhccccCCCCCCccchhhHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHHHhcCCceE
Q 014951 240 KISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLT 319 (415)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~~G~~~~~~~~~~~~~~~~~~~~ 319 (415)
. ....+ ..++|.+++||+++++++.+.+.+.++.+++
T Consensus 305 ~-----------------------------------~~~~~--------~~~lr~i~~gG~~l~~~~~~~~~~~~~~~i~ 341 (537)
T PRK13382 305 V-----------------------------------RNRYS--------GRSLRFAAASGSRMRPDVVIAFMDQFGDVIY 341 (537)
T ss_pred h-----------------------------------cccCC--------ccceeEEEEcCCCCCHHHHHHHHHHcCCcEE
Confidence 0 00000 1379999999999999999999999999999
Q ss_pred EeeccCCCCceeeeecCCcccccCcccccccCeEEEEeecCCCCCCCCCCCCCCeEEEecCCccccccCCchhhhhhhcC
Q 014951 320 QGYGLTESCSGCFTSLADVFNMIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVIVD 399 (415)
Q Consensus 320 ~~yG~tE~~~~~~~~~~~~~~~~~~~G~~~~g~~~~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gY~~~~~~~~~~~~~ 399 (415)
+.||+||++.++...........+++|+|+++++++|+| +++.. ++.|+.|||+++|++++.||+ ++.+. .+.+
T Consensus 342 ~~YG~TE~~~~~~~~~~~~~~~~~~vG~p~~~~~~~i~d-~~~~~--~~~g~~GEl~v~g~~~~~gY~--~~~~~-~~~~ 415 (537)
T PRK13382 342 NNYNATEAGMIATATPADLRAAPDTAGRPAEGTEIRILD-QDFRE--VPTGEVGTIFVRNDTQFDGYT--SGSTK-DFHD 415 (537)
T ss_pred ecccccccCcceecChhHhccCCCCccccCcCcEEEEEC-CCCCC--CCCCCeeEEEEEcCCcccCcc--ccchh-hccC
Confidence 999999998766544332223458999999999999999 77654 456699999999999999998 44443 4568
Q ss_pred CceecCceEEEcCCCC
Q 014951 400 GWFHTGDIGEWQPMEL 415 (415)
Q Consensus 400 g~~~TGDlg~~d~~G~ 415 (415)
|||+|||++++|+||+
T Consensus 416 g~~~TGDl~~~~~~g~ 431 (537)
T PRK13382 416 GFMASGDVGYLDENGR 431 (537)
T ss_pred CCEeeCceEEEeCCCc
Confidence 9999999999999985
No 33
>PRK08314 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=9.1e-48 Score=378.07 Aligned_cols=358 Identities=24% Similarity=0.380 Sum_probs=279.1
Q ss_pred ccC-CCCCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEcCCChhhhhhcCccCCCC
Q 014951 2 RSR-GVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLY 80 (415)
Q Consensus 2 ~~~-Gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~ 80 (415)
.+. |+++||+|+++++|+++++++++||+++|++++|+++.++.+++.++++.++++++|++.+..+.+....... .
T Consensus 53 ~~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~--~ 130 (546)
T PRK08314 53 QQECGVRKGDRVLLYMQNSPQFVIAYYAILRANAVVVPVNPMNREEELAHYVTDSGARVAIVGSELAPKVAPAVGNL--R 130 (546)
T ss_pred HHhhCCCCCCEEEEECCCChHHHHHHHHHHHcCcEEeecCcCcCHHHHHHHHHhCCCeEEEEccchhhhHHHHhhcc--C
Confidence 455 9999999999999999999999999999999999999999999999999999999999988766654432221 2
Q ss_pred ccEEEEecCCCc--h-----hhH-------HhhhcCceeecHHHHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCCceEE
Q 014951 81 LKTIVSFANVSS--S-----QKK-------EAEELGVSCFSWEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVV 146 (415)
Q Consensus 81 ~~~v~~~~~~~~--~-----~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~ 146 (415)
.+.++....... . ... ........+..+++...... ........++++++++|||||||.||+|.
T Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~a~i~~TSGtTG~PK~v~ 209 (546)
T PRK08314 131 LRHVIVAQYSDYLPAEPEIAVPAWLRAEPPLQALAPGGVVAWKEALAAGL-APPPHTAGPDDLAVLPYTSGTTGVPKGCM 209 (546)
T ss_pred cceEEEecchhhcccccccCcccccccccccccccccccccHHHHhcccC-CCCCCCCCCCCeEEEEeCCCCCCCCcEEE
Confidence 233332211000 0 000 00000112334555543321 12233456789999999999999999999
Q ss_pred eecHHHHHHhhhhhhhhhhccccCCCCCEEEEeCChhhHHHHHH-HHHhhhcCcEEEEeCC-CHHHHHHHHHhhCCeEEE
Q 014951 147 LTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQII-ETHCIHKGCSIGFWRG-DVRYLMEDIQELKPTMFS 224 (415)
Q Consensus 147 ~th~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~-~~~~l~~G~~vv~~~~-~~~~~~~~i~~~~~t~~~ 224 (415)
+||++++.++......+ .+..+|++++.+|++|..++.. ++.++..|+++++.+. ++..+++.++++++|++.
T Consensus 210 ~s~~~l~~~~~~~~~~~-----~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~i~~~~~~~~~~~~~~i~~~~~t~~~ 284 (546)
T PRK08314 210 HTHRTVMANAVGSVLWS-----NSTPESVVLAVLPLFHVTGMVHSMNAPIYAGATVVLMPRWDREAAARLIERYRVTHWT 284 (546)
T ss_pred EecHHHHHHHHHHHHhh-----CCCCCceEEEEcCchHHHHHHHHHHHHHHcCCeEEecCCCCHHHHHHHHHHhcCceec
Confidence 99999999888765555 6788999999999999999865 6788999999999887 899999999999999999
Q ss_pred eCcHHHHHHHHHHHHhhhcCChhhHHHHHHHHHhhhhccccCCCCCCccchhhHHHHHHHHHHhCCceeEEEEecCCCCH
Q 014951 225 GVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPI 304 (415)
Q Consensus 225 ~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~~G~~~~~ 304 (415)
++|+++..++.. +.....++ +++|.+++||+++++
T Consensus 285 ~~p~~~~~ll~~-------------------------------------~~~~~~~~--------~~l~~~~~gG~~~~~ 319 (546)
T PRK08314 285 NIPTMVVDFLAS-------------------------------------PGLAERDL--------SSLRYIGGGGAAMPE 319 (546)
T ss_pred ccHHHHHHHHhC-------------------------------------CCccccCc--------hhhheeeeccccCCH
Confidence 999999877541 00111111 378999999999999
Q ss_pred HHHHHHHHhcCCceEEeeccCCCCceeeeecCCcccccCcccccccCeEEEEeecCCCCCCCCCCCCCCeEEEecCCccc
Q 014951 305 HVEEFLRVTSGAPLTQGYGLTESCSGCFTSLADVFNMIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFS 384 (415)
Q Consensus 305 ~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~G~~~~g~~~~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~ 384 (415)
++.+++.+.++.++++.||+||++........+.. ..+++|.|++|++++|+| ++.. .+++.++.|||+++|+.++.
T Consensus 320 ~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~-~~~~~G~~~~g~~~~i~d-~~~~-~~~~~g~~Gel~v~g~~~~~ 396 (546)
T PRK08314 320 AVAERLKELTGLDYVEGYGLTETMAQTHSNPPDRP-KLQCLGIPTFGVDARVID-PETL-EELPPGEVGEIVVHGPQVFK 396 (546)
T ss_pred HHHHHHHHHcCCcEEecccccccccceecCCCcCC-CCCccCcccCCeEEEEEe-CCCC-cCCCCCCceEEEEECCchhc
Confidence 99999999899999999999999876655443322 347899999999999999 4432 34456689999999999999
Q ss_pred cccCCchhhhhhhc--C--CceecCceEEEcCCCC
Q 014951 385 GYYKRPDLTEEVIV--D--GWFHTGDIGEWQPMEL 415 (415)
Q Consensus 385 gY~~~~~~~~~~~~--~--g~~~TGDlg~~d~~G~ 415 (415)
||+++++.+++.|. + +||+|||+|++|++|+
T Consensus 397 gY~~~~~~t~~~f~~~~~~~~~~TGDl~~~~~~g~ 431 (546)
T PRK08314 397 GYWNRPEATAEAFIEIDGKRFFRTGDLGRMDEEGY 431 (546)
T ss_pred cccCChhHhhhhhhhcCCCceEecCCEEEEcCCCc
Confidence 99999999988872 3 5999999999999985
No 34
>PLN02246 4-coumarate--CoA ligase
Probab=100.00 E-value=1.1e-47 Score=376.38 Aligned_cols=353 Identities=26% Similarity=0.387 Sum_probs=276.5
Q ss_pred CccCCCCCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEcCCChhhhhhcCccCCCC
Q 014951 1 MRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLY 80 (415)
Q Consensus 1 L~~~Gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~ 80 (415)
|.++|+++||+|+++++|+++++++++||+++|++++|+++..+.+++..+++.++++++|++......+...... ..
T Consensus 67 L~~~g~~~gd~V~i~~~~~~~~~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~--~~ 144 (537)
T PLN02246 67 LHKLGIRQGDVVMLLLPNCPEFVLAFLGASRRGAVTTTANPFYTPAEIAKQAKASGAKLIITQSCYVDKLKGLAED--DG 144 (537)
T ss_pred HHHhCCCCCCEEEEECCCChHHHHHHHHHHHcCEEEecCCCCCCHHHHHHHHHhcCCcEEEEccchHHHHHHHhhc--CC
Confidence 3568999999999999999999999999999999999999999999999999999999999998876655443221 11
Q ss_pred ccEEEEecCCCchhhHHhhhcCceeecHHHHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEeecHHHHHHhhhhh
Q 014951 81 LKTIVSFANVSSSQKKEAEELGVSCFSWEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVD 160 (415)
Q Consensus 81 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~~~~ 160 (415)
..++.++... .....+.++........+.....++++++++|||||||.||+|+++|+++........
T Consensus 145 -~~~i~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~PKgv~~s~~~l~~~~~~~~ 212 (537)
T PLN02246 145 -VTVVTIDDPP-----------EGCLHFSELTQADENELPEVEISPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQV 212 (537)
T ss_pred -ceEEEeCCCC-----------CCceeHHHHhcCCCCCCCCCCCCccCEEEEEeCCCCCCCCceEEEeHHHHHHHHHHHh
Confidence 2344443321 0123344443322222222345678999999999999999999999999988765432
Q ss_pred hhhhhccccCCCCCEEEEeCChhhHHHHHH-HHHhhhcCcEEEEeCC-CHHHHHHHHHhhCCeEEEeCcHHHHHHHHHHH
Q 014951 161 QMFVVTGKVCSEEDTYFSFLPLAHIYDQII-ETHCIHKGCSIGFWRG-DVRYLMEDIQELKPTMFSGVPRVYDRIYTGIS 238 (415)
Q Consensus 161 ~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~-~~~~l~~G~~vv~~~~-~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~ 238 (415)
... .....+..+|++++.+|++|.+++.. ++.++..|+++++.+. ++..+++.|+++++|++.++|+++..+.+...
T Consensus 213 ~~~-~~~~~~~~~d~~l~~~pl~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~ 291 (537)
T PLN02246 213 DGE-NPNLYFHSDDVILCVLPMFHIYSLNSVLLCGLRVGAAILIMPKFEIGALLELIQRHKVTIAPFVPPIVLAIAKSPV 291 (537)
T ss_pred hcc-ccccCCCCCcEEEEeechHHHHHHHHHHHHHHhcCCEEEEeCCCCHHHHHHHHHHhCceEEEcchHHHHHHhcCcc
Confidence 210 01126789999999999999999875 6678999999999887 99999999999999999999999988754110
Q ss_pred HhhhcCChhhHHHHHHHHHhhhhccccCCCCCCccchhhHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHHHhc-CCc
Q 014951 239 NKISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTS-GAP 317 (415)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~~G~~~~~~~~~~~~~~~-~~~ 317 (415)
....++ +++|.+++||+++++++.+++.+.+ +..
T Consensus 292 -------------------------------------~~~~~~--------~~lr~~~~gg~~l~~~~~~~~~~~~~~~~ 326 (537)
T PLN02246 292 -------------------------------------VEKYDL--------SSIRMVLSGAAPLGKELEDAFRAKLPNAV 326 (537)
T ss_pred -------------------------------------ccccCc--------cceeEEEEecCcCCHHHHHHHHHHcCCCe
Confidence 000001 3799999999999999999999988 678
Q ss_pred eEEeeccCCCCceeeeecC---C-cccccCcccccccCeEEEEeecCCCCCCCCCCCCCCeEEEecCCccccccCCchhh
Q 014951 318 LTQGYGLTESCSGCFTSLA---D-VFNMIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLT 393 (415)
Q Consensus 318 ~~~~yG~tE~~~~~~~~~~---~-~~~~~~~~G~~~~g~~~~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gY~~~~~~~ 393 (415)
+++.||+||++.+++.... . ....++++|+|+++++++|+| ++++ .+++.|+.|||+++|+.++.||+++++.+
T Consensus 327 ~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d-~~~~-~~~~~g~~Gel~v~g~~~~~GY~~~~~~~ 404 (537)
T PLN02246 327 LGQGYGMTEAGPVLAMCLAFAKEPFPVKSGSCGTVVRNAELKIVD-PETG-ASLPRNQPGEICIRGPQIMKGYLNDPEAT 404 (537)
T ss_pred EeccccccccCcccccccccCCCCccccCCccccccCCcEEEEec-CCCC-CcCCCCCceEEEEECCchhccccCCchhh
Confidence 9999999999876543221 1 112347899999999999998 4332 45567799999999999999999999999
Q ss_pred hhhh-cCCceecCceEEEcCCCC
Q 014951 394 EEVI-VDGWFHTGDIGEWQPMEL 415 (415)
Q Consensus 394 ~~~~-~~g~~~TGDlg~~d~~G~ 415 (415)
.+.| .+|||+|||+|++|+||+
T Consensus 405 ~~~~~~~~~~~TGD~~~~~~~g~ 427 (537)
T PLN02246 405 ANTIDKDGWLHTGDIGYIDDDDE 427 (537)
T ss_pred hhcccCCCCeeecceEEEeCCCe
Confidence 9888 689999999999999984
No 35
>PRK05857 acyl-CoA synthetase; Validated
Probab=100.00 E-value=2.5e-48 Score=380.61 Aligned_cols=352 Identities=21% Similarity=0.264 Sum_probs=263.5
Q ss_pred CccCCCCCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEcCCChhhhhhcCccCCCC
Q 014951 1 MRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLY 80 (415)
Q Consensus 1 L~~~Gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~ 80 (415)
|.+.|+++||+|+++++|++++++++|||+++|++++|+++.++.+++.++++.++++.+|+++........ .......
T Consensus 58 L~~~g~~~g~~V~i~~~~~~e~~~~~lA~~~~G~v~v~l~~~~~~~~l~~~~~~~~~~~ii~~~~~~~~~~~-~~~~~~~ 136 (540)
T PRK05857 58 LRAQSVSRGSRVLVISDNGPETYLSVLACAKLGAIAVMADGNLPIAAIERFCQITDPAAALVAPGSKMASSA-VPEALHS 136 (540)
T ss_pred HHHhCcCCCCEEEEEcCCCHHHHHHHHHHHHcCeEEEecCccCCHHHHHHHHHhcCCceEEEeccchhcccc-ccccccc
Confidence 456799999999999999999999999999999999999999999999999999999999999865322111 1111111
Q ss_pred ccEEEEecCCCchhhHHhhhcCceeecHHHHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEeecHHHHHHhhhhh
Q 014951 81 LKTIVSFANVSSSQKKEAEELGVSCFSWEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVD 160 (415)
Q Consensus 81 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~~~~ 160 (415)
.. ++..+..... . . +.+.... ..........++++++++|||||||.||+|.+||+++..+.....
T Consensus 137 ~~-~~~~~~~~~~-~---------~--~~~~~~~-~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~sh~~~~~~~~~~~ 202 (540)
T PRK05857 137 IP-VIAVDIAAVT-R---------E--SEHSLDA-ASLAGNADQGSEDPLAMIFTSGTTGEPKAVLLANRTFFAVPDILQ 202 (540)
T ss_pred cc-eeEeeccccc-c---------c--ccccccc-cccccccCCCCCCeEEEEeCCCCCCCCCeEEEechhhhhhhHHhh
Confidence 11 2222211100 0 0 0000000 001112345678999999999999999999999999987654332
Q ss_pred hhhhhccccCCCCCEEEEeCChhhHHHHHHHHHhhhcCcEEEEeCCCHHHHHHHHHhhCCeEEEeCcHHHHHHHHHHHHh
Q 014951 161 QMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRGDVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNK 240 (415)
Q Consensus 161 ~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~vv~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~ 240 (415)
.. .........++++++.+|++|..++...+.+++.|+++++.+.++..+++.|+++++|+++++|+++..+++.....
T Consensus 203 ~~-~~~~~~~~~~~~~~~~~p~~h~~~l~~~~~~l~~G~~~v~~~~~~~~~~~~i~~~~it~~~~~P~~~~~l~~~~~~~ 281 (540)
T PRK05857 203 KE-GLNWVTWVVGETTYSPLPATHIGGLWWILTCLMHGGLCVTGGENTTSLLEILTTNAVATTCLVPTLLSKLVSELKSA 281 (540)
T ss_pred hc-cccccccccCceeeecCCccccchHHHHHHHhhcceeEEecCCChhHHHHHHHhcCcceEEeChHHHHHHHhccccC
Confidence 11 01111445678999999999999988778889999998876668999999999999999999999998886522100
Q ss_pred hhcCChhhHHHHHHHHHhhhhccccCCCCCCccchhhHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHHHhcCCceEE
Q 014951 241 ISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQ 320 (415)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~~G~~~~~~~~~~~~~~~~~~~~~ 320 (415)
..++ +++|.+++||++++....+++. .+++++++
T Consensus 282 -------------------------------------~~~~--------~~lr~~~~gG~~~~~~~~~~~~-~~g~~i~~ 315 (540)
T PRK05857 282 -------------------------------------NATV--------PSLRLVGYGGSRAIAADVRFIE-ATGVRTAQ 315 (540)
T ss_pred -------------------------------------CCcC--------ccceEEEEcCccCCchhHHHHH-HhCCeeec
Confidence 0001 3899999999999888776554 67999999
Q ss_pred eeccCCCCceeeeecCCc----ccccCcccccccCeEEEEeecCCCCCCC----CCCCCCCeEEEecCCccccccCCchh
Q 014951 321 GYGLTESCSGCFTSLADV----FNMIGTVGVPMTTVEARLESVPEMGYDA----LSSVPRGEICLRGNTLFSGYYKRPDL 392 (415)
Q Consensus 321 ~yG~tE~~~~~~~~~~~~----~~~~~~~G~~~~g~~~~i~~~~~~~~~~----~~~~~~Gel~v~~~~~~~gY~~~~~~ 392 (415)
.||+||++........+. ....+++|+|++|++++|++ +++.... .+.++.|||+++||.++.|||++++.
T Consensus 316 ~YG~TE~~~~~~~~~~~~~~~~~~~~~~~G~~~~g~~v~i~d-~~~~~~~~~~~~~~~~~Gel~v~g~~~~~GY~~~~~~ 394 (540)
T PRK05857 316 VYGLSETGCTALCLPTDDGSIVKIEAGAVGRPYPGVDVYLAA-TDGIGPTAPGAGPSASFGTLWIKSPANMLGYWNNPER 394 (540)
T ss_pred ccCCCcCCceeeecccccccccccccCCcCcccCCcEEEEEC-ccccCccccccCCCCCcceEEEeCcchhhhhhCCccc
Confidence 999999986544332221 11347899999999999998 6554221 23468899999999999999999999
Q ss_pred hhhhhcCCceecCceEEEcCCCC
Q 014951 393 TEEVIVDGWFHTGDIGEWQPMEL 415 (415)
Q Consensus 393 ~~~~~~~g~~~TGDlg~~d~~G~ 415 (415)
+.+.|.+|||+|||+|++|+||+
T Consensus 395 t~~~~~~g~~~TGDlg~~d~~g~ 417 (540)
T PRK05857 395 TAEVLIDGWVNTGDLLERREDGF 417 (540)
T ss_pred hhhhcCCCceeccceEEEcCCce
Confidence 99999999999999999999985
No 36
>PRK06187 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=1.3e-47 Score=375.29 Aligned_cols=357 Identities=27% Similarity=0.424 Sum_probs=294.3
Q ss_pred CccCCCCCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEcCCChhhhhhcCccCCCC
Q 014951 1 MRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLY 80 (415)
Q Consensus 1 L~~~Gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~ 80 (415)
|.+.|+++||+|+++++|+++++++++||+++|++++++++.++.+++..+++.+++++++++.+..+.+.+..... +.
T Consensus 48 L~~~g~~~~~~V~l~~~~~~~~~~~~la~~~~G~~~v~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~-~~ 126 (521)
T PRK06187 48 LRALGVKKGDRVAVFDWNSHEYLEAYFAVPKIGAVLHPINIRLKPEEIAYILNDAEDRVVLVDSEFVPLLAAILPQL-PT 126 (521)
T ss_pred HHHcCCCCCCEEEEECCCCHHHHHHHHHHHHcCeEEEecccCCCHHHHHHHHHhcCCeEEEEcchHHHHHHHHhhcc-CC
Confidence 34679999999999999999999999999999999999999999999999999999999999998777665544432 44
Q ss_pred ccEEEEecCCCchhhHHhhhcCceeecHHHHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEeecHHHHHHhhhhh
Q 014951 81 LKTIVSFANVSSSQKKEAEELGVSCFSWEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVD 160 (415)
Q Consensus 81 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~~~~ 160 (415)
.+.++..++.... ........+.++...............+++++++|||||||.||+|.+||.++........
T Consensus 127 ~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~ 200 (521)
T PRK06187 127 VRTVIVEGDGPAA------PLAPEVGEYEELLAAASDTFDFPDIDENDAAAMLYTSGTTGHPKGVVLSHRNLFLHSLAVC 200 (521)
T ss_pred ccEEEEecCcccc------ccccccccHHHHhhcCCccCCCCCCCccceEEEEECCCCCCCCceEEeehHHHHHHHHHHH
Confidence 5566666543210 1112345566665544333334456678999999999999999999999999998887766
Q ss_pred hhhhhccccCCCCCEEEEeCChhhHHHHHHHHHhhhcCcEEEEeCC-CHHHHHHHHHhhCCeEEEeCcHHHHHHHHHHHH
Q 014951 161 QMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG-DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISN 239 (415)
Q Consensus 161 ~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~vv~~~~-~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~ 239 (415)
..+ .+..+|++++.+|++|.+++...+.+++.|+++++.+. ++..+++.++++++|.++++|++++.+.+....
T Consensus 201 ~~~-----~~~~~d~~~~~~~~~~~~~~~~~~~~l~~G~~~v~~~~~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~ 275 (521)
T PRK06187 201 AWL-----KLSRDDVYLVIVPMFHVHAWGLPYLALMAGAKQVIPRRFDPENLLDLIETERVTFFFAVPTIWQMLLKAPRA 275 (521)
T ss_pred Hhh-----CCCCCCEEEEeCCchHHhhHHHHHHHHHhCCEEEecCCCCHHHHHHHHHHhCCeEEEchHHHHHHHHcCcCC
Confidence 655 77899999999999999998877779999999999876 999999999999999999999999988652211
Q ss_pred hhhcCChhhHHHHHHHHHhhhhccccCCCCCCccchhhHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHHHhcCCceE
Q 014951 240 KISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLT 319 (415)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~~G~~~~~~~~~~~~~~~~~~~~ 319 (415)
...++ .++|.+++||+++++++.+++.+.++++++
T Consensus 276 -------------------------------------~~~~~--------~~l~~v~~~Ge~l~~~~~~~~~~~~~~~v~ 310 (521)
T PRK06187 276 -------------------------------------YFVDF--------SSLRLVIYGGAALPPALLREFKEKFGIDLV 310 (521)
T ss_pred -------------------------------------CccCc--------chhhEEEEcCcCCCHHHHHHHHHHhCcchh
Confidence 00011 379999999999999999999998899999
Q ss_pred EeeccCCCCceeeeecCCcc-----cccCcccccccCeEEEEeecCCCCCCCCCCCCCCeEEEecCCccccccCCchhhh
Q 014951 320 QGYGLTESCSGCFTSLADVF-----NMIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTE 394 (415)
Q Consensus 320 ~~yG~tE~~~~~~~~~~~~~-----~~~~~~G~~~~g~~~~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gY~~~~~~~~ 394 (415)
+.||+||++.++........ ...+++|.|++++.++|+| +++..++.+.|+.|||+++|+.++.||+++++.+.
T Consensus 311 ~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~~-~~~~~~~~~~g~~Gel~v~~~~~~~~y~~~~~~~~ 389 (521)
T PRK06187 311 QGYGMTETSPVVSVLPPEDQLPGQWTKRRSAGRPLPGVEARIVD-DDGDELPPDGGEVGEIIVRGPWLMQGYWNRPEATA 389 (521)
T ss_pred eeeccCccCcccccCCcccccccccccCCccccccCCeEEEEEC-CCCCCCCCCCCCeeEEEEECcchhhhhcCCHHHHH
Confidence 99999999876655443322 2458899999999999999 77776665447999999999999999999999999
Q ss_pred hhhcCCceecCceEEEcCCCC
Q 014951 395 EVIVDGWFHTGDIGEWQPMEL 415 (415)
Q Consensus 395 ~~~~~g~~~TGDlg~~d~~G~ 415 (415)
+.|.++||+|||++++|++|+
T Consensus 390 ~~~~~~~~~tGD~~~~~~~g~ 410 (521)
T PRK06187 390 ETIDGGWLHTGDVGYIDEDGY 410 (521)
T ss_pred HHhhCCceeccceEEEcCCCC
Confidence 999899999999999999985
No 37
>PRK07008 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=1.7e-47 Score=374.77 Aligned_cols=355 Identities=20% Similarity=0.321 Sum_probs=276.9
Q ss_pred CccCCCCCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEcCCChhhhhhcCccCCCC
Q 014951 1 MRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLY 80 (415)
Q Consensus 1 L~~~Gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~ 80 (415)
|.+.|+++||+|+++++|+++++++++||+++|++++|++|.++++++..+++.+++++++++.+..+.+.+..... ..
T Consensus 56 L~~~g~~~~d~v~i~~~~~~~~~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 134 (539)
T PRK07008 56 LAALGVEPGDRVGTLAWNGYRHLEAYYGVSGSGAVCHTINPRLFPEQIAYIVNHAEDRYVLFDLTFLPLVDALAPQC-PN 134 (539)
T ss_pred HHHcCCCCCCEEEEEcCCcHHHHHHHHHHHhcCcEEeecccccCHHHHHHHHhccCCcEEEEcchhHHHHHHHHhhC-CC
Confidence 45679999999999999999999999999999999999999999999999999999999999988766554433222 33
Q ss_pred ccEEEEecCCCchhhHHhhhcCceeecHHHHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEeecHHHHHHhh--h
Q 014951 81 LKTIVSFANVSSSQKKEAEELGVSCFSWEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVL--S 158 (415)
Q Consensus 81 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~--~ 158 (415)
.+.++........ ......+..++++..............++++++++|||||||.||+|++||.++..... .
T Consensus 135 ~~~~~~~~~~~~~-----~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~~~~~~~~~~ 209 (539)
T PRK07008 135 VKGWVAMTDAAHL-----PAGSTPLLCYETLVGAQDGDYDWPRFDENQASSLCYTSGTTGNPKGALYSHRSTVLHAYGAA 209 (539)
T ss_pred ceEEEEEccCCcc-----ccCCcccccHHHHhcccCCCcCcccCCcccceEEEECCCCCCCCcEEEEecHHHHHHHHHhh
Confidence 4455544332110 00112345666765443222223345678899999999999999999999999875432 2
Q ss_pred hhhhhhhccccCCCCCEEEEeCChhhHHHHHHHHHhhhcCcEEEEeCC--CHHHHHHHHHhhCCeEEEeCcHHHHHHHHH
Q 014951 159 VDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTMFSGVPRVYDRIYTG 236 (415)
Q Consensus 159 ~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~vv~~~~--~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~ 236 (415)
....+ .++.+|++++..|++|..++...+.++..|+++++.+. ++..+++.++++++|++.++|+++..+++.
T Consensus 210 ~~~~~-----~~~~~d~~l~~~p~~h~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~l~~~~vt~~~~~P~~~~~l~~~ 284 (539)
T PRK07008 210 LPDAM-----GLSARDAVLPVVPMFHVNAWGLPYSAPLTGAKLVLPGPDLDGKSLYELIEAERVTFSAGVPTVWLGLLNH 284 (539)
T ss_pred ccccc-----CCCCCceEEecCchHHhhhHHHHHHHHhcCceEEEecCCcCHHHHHHHHHHcCCEEEEechHHHHHHHhc
Confidence 22223 66789999999999998887777788899999998754 899999999999999999999999987652
Q ss_pred HHHhhhcCChhhHHHHHHHHHhhhhccccCCCCCCccchhhHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHHHhcCC
Q 014951 237 ISNKISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGA 316 (415)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~~G~~~~~~~~~~~~~~~~~ 316 (415)
.... ..++ +++|.++++|+++++++.+.+.+.++.
T Consensus 285 ~~~~-------------------------------------~~~~--------~~l~~~~~~G~~l~~~~~~~~~~~~~~ 319 (539)
T PRK07008 285 MREA-------------------------------------GLRF--------STLRRTVIGGSACPPAMIRTFEDEYGV 319 (539)
T ss_pred cccc-------------------------------------CCCc--------ccceEEEEcCCCCCHHHHHHHHHHhCC
Confidence 2110 0011 379999999999999999999888999
Q ss_pred ceEEeeccCCCCceeeeecCC----------cccccCcccccccCeEEEEeecCCCCCCCCCCCCCCeEEEecCCccccc
Q 014951 317 PLTQGYGLTESCSGCFTSLAD----------VFNMIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGY 386 (415)
Q Consensus 317 ~~~~~yG~tE~~~~~~~~~~~----------~~~~~~~~G~~~~g~~~~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gY 386 (415)
++++.||+||++..+...... ......++|+|+||++++|+| +++...+.+.++.|||+++|+.++.||
T Consensus 320 ~l~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~p~pg~~~~i~d-~~~~~~~~~~~~~Gei~v~g~~~~~gy 398 (539)
T PRK07008 320 EVIHAWGMTEMSPLGTLCKLKWKHSQLPLDEQRKLLEKQGRVIYGVDMKIVG-DDGRELPWDGKAFGDLQVRGPWVIDRY 398 (539)
T ss_pred ceecccccccccccceecccccccccCCchhhhhhcccCCccccceEEEEEC-CCCCccCCCCCcceEEEEeCCccchhh
Confidence 999999999998755433211 011236799999999999999 777766665557899999999999999
Q ss_pred cCCchhhhhhhcCCceecCceEEEcCCCC
Q 014951 387 YKRPDLTEEVIVDGWFHTGDIGEWQPMEL 415 (415)
Q Consensus 387 ~~~~~~~~~~~~~g~~~TGDlg~~d~~G~ 415 (415)
+++++ ..+.+|||+|||+|++|+||+
T Consensus 399 ~~~~~---~~~~~g~~~TGD~~~~~~dg~ 424 (539)
T PRK07008 399 FRGDA---SPLVDGWFPTGDVATIDADGF 424 (539)
T ss_pred cCChh---hhhcCCCcccCceEEEcCCCc
Confidence 99883 345689999999999999985
No 38
>PRK05605 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=1.2e-47 Score=379.07 Aligned_cols=364 Identities=27% Similarity=0.452 Sum_probs=280.1
Q ss_pred CccCCCCCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEcCCChhhhhhcCccCCCC
Q 014951 1 MRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLY 80 (415)
Q Consensus 1 L~~~Gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~ 80 (415)
|.+.|+++||+|+++++|+++++++++||+++|++++|++|.++.+++.+++++++++++|+++.....+...... ..
T Consensus 74 L~~~gi~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~--~~ 151 (573)
T PRK05605 74 LRALGVRPGDRVAIVLPNCPQHIVAFYAVLRLGAVVVEHNPLYTAHELEHPFEDHGARVAIVWDKVAPTVERLRRT--TP 151 (573)
T ss_pred HHHhCCCCCCEEEEECCCCHHHHHHHHHHHhcCcEEeecCcCCCHHHHHHHHhccCCcEEEechhhHHHHHhhhhc--cc
Confidence 3567999999999999999999999999999999999999999999999999999999999988766554433221 12
Q ss_pred ccEEEEecCCCch---hhH--------------HhhhcCceeecHHHHHhcCCCC----CCCCCCCCCCeEEEEecCCCC
Q 014951 81 LKTIVSFANVSSS---QKK--------------EAEELGVSCFSWEEFLQLGTLD----CELPPKKKTNISTIMYTSGTT 139 (415)
Q Consensus 81 ~~~v~~~~~~~~~---~~~--------------~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~i~~TSGtT 139 (415)
.+.++.++..... ... ...........|+++....... ........+++++++||||||
T Consensus 152 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTT 231 (573)
T PRK05605 152 LETIVSVNMIAAMPLLQRLALRLPIPALRKARAALTGPAPGTVPWETLVDAAIGGDGSDVSHPRPTPDDVALILYTSGTT 231 (573)
T ss_pred cceeEeeecccccccccccccccccccccccccccccCCCcceeHHHHhhccccccccccCCCCCCCCCEEEEEcCCCCC
Confidence 2333333211000 000 0000011234566554432111 122345678999999999999
Q ss_pred CCCceEEeecHHHHHHhhhhhhhhhhccccCCCCCEEEEeCChhhHHHHHH-HHHhhhcCcEEEEeCC-CHHHHHHHHHh
Q 014951 140 GEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQII-ETHCIHKGCSIGFWRG-DVRYLMEDIQE 217 (415)
Q Consensus 140 G~pK~v~~th~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~-~~~~l~~G~~vv~~~~-~~~~~~~~i~~ 217 (415)
|.||+|.+||.++...+......+. ......+++++.+|++|.+++.. ++.+++.|+++++.+. ++..+++.+++
T Consensus 232 G~PK~v~~s~~~l~~~~~~~~~~~~---~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~l~~ 308 (573)
T PRK05605 232 GKPKGAQLTHRNLFANAAQGKAWVP---GLGDGPERVLAALPMFHAYGLTLCLTLAVSIGGELVLLPAPDIDLILDAMKK 308 (573)
T ss_pred CCCcEEEEecHHHHHHHHHHHhhcc---ccCCCCcEEEEecChHHHHHHHHHHHHHHHcCCEEEEeCCCCHHHHHHHHHH
Confidence 9999999999999887754333220 01235789999999999999875 5667899999988876 99999999999
Q ss_pred hCCeEEEeCcHHHHHHHHHHHHhhhcCChhhHHHHHHHHHhhhhccccCCCCCCccchhhHHHHHHHHHHhCCceeEEEE
Q 014951 218 LKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLS 297 (415)
Q Consensus 218 ~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~ 297 (415)
+++|++.++|.+++.+.+.... ...++ +++|.+++
T Consensus 309 ~~~t~~~~~P~~~~~l~~~~~~-------------------------------------~~~~~--------~~lr~i~~ 343 (573)
T PRK05605 309 HPPTWLPGVPPLYEKIAEAAEE-------------------------------------RGVDL--------SGVRNAFS 343 (573)
T ss_pred hCCEEEEchHHHHHHHHhCccc-------------------------------------cCCCc--------hhccEEEE
Confidence 9999999999999988652110 00011 37999999
Q ss_pred ecCCCCHHHHHHHHHhcCCceEEeeccCCCCceeeeecCCcccccCcccccccCeEEEEeecCCCCCCCCCCCCCCeEEE
Q 014951 298 GAAPLPIHVEEFLRVTSGAPLTQGYGLTESCSGCFTSLADVFNMIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICL 377 (415)
Q Consensus 298 ~G~~~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~G~~~~g~~~~i~~~~~~~~~~~~~~~~Gel~v 377 (415)
||+++++++.+.+.+.++.++++.||+||+++++...........+++|.|++|+.++|+| +++...+++.++.|||++
T Consensus 344 gg~~l~~~~~~~~~~~~~~~i~~~YG~TE~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d-~~~~~~~~~~g~~Gel~v 422 (573)
T PRK05605 344 GAMALPVSTVELWEKLTGGLLVEGYGLTETSPIIVGNPMSDDRRPGYVGVPFPDTEVRIVD-PEDPDETMPDGEEGELLV 422 (573)
T ss_pred CCCcCCHHHHHHHHHHhCCCeecccccchhchhhhcCCcccCCcCCccccCCCCCEEEEEc-CCCCCccCCCCCeeEEEE
Confidence 9999999999999988899999999999998776655443334458999999999999999 655335566779999999
Q ss_pred ecCCccccccCCchhhhhhhcCCceecCceEEEcCCCC
Q 014951 378 RGNTLFSGYYKRPDLTEEVIVDGWFHTGDIGEWQPMEL 415 (415)
Q Consensus 378 ~~~~~~~gY~~~~~~~~~~~~~g~~~TGDlg~~d~~G~ 415 (415)
+|+.++.||+++++.+.+.|.+|||+|||+|++|++|+
T Consensus 423 ~~~~~~~gy~~~~~~~~~~~~~g~~~TGD~~~~~~~g~ 460 (573)
T PRK05605 423 RGPQVFKGYWNRPEETAKSFLDGWFRTGDVVVMEEDGF 460 (573)
T ss_pred ecCchhhhhcCChhHhhhcccCCCcccCCEEEEcCCCc
Confidence 99999999999999999999889999999999999985
No 39
>PRK05677 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=2.9e-47 Score=375.09 Aligned_cols=358 Identities=22% Similarity=0.363 Sum_probs=270.0
Q ss_pred CCCCCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEcCCChhhhhhcCccCCCCccE
Q 014951 4 RGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKT 83 (415)
Q Consensus 4 ~Gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~ 83 (415)
.|+++||+|+++++|++++++++|||+++|++++|++|..+.+++.+++++++++++|++.+....+.+.... ...+.
T Consensus 70 ~gi~~gd~Vai~~~n~~~~~~~~la~~~~Ga~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~--~~~~~ 147 (562)
T PRK05677 70 TDLKPGDRIAVQLPNVLQYPVAVFGAMRAGLIVVNTNPLYTAREMEHQFNDSGAKALVCLANMAHLAEKVLPK--TGVKH 147 (562)
T ss_pred cCCCCCCEEEEECCCCHHHHHHHHHHHHcCeEEeecCCCCCHHHHHHHHhccCceEEEEecchhhhHHHhhhc--cCcce
Confidence 5999999999999999999999999999999999999999999999999999999999987665544332221 12233
Q ss_pred EEEecCCC--chhhH-Hhh-----------h-cCceeecHHHHHhcCC-CCCCCCCCCCCCeEEEEecCCCCCCCceEEe
Q 014951 84 IVSFANVS--SSQKK-EAE-----------E-LGVSCFSWEEFLQLGT-LDCELPPKKKTNISTIMYTSGTTGEPKGVVL 147 (415)
Q Consensus 84 v~~~~~~~--~~~~~-~~~-----------~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~ 147 (415)
++..+... ..... ... . .......+.+.+.... .........++++++++|||||||.||+|++
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgv~~ 227 (562)
T PRK05677 148 VIVTEVADMLPPLKRLLINAVVKHVKKMVPAYHLPQAVKFNDALAKGAGQPVTEANPQADDVAVLQYTGGTTGVAKGAML 227 (562)
T ss_pred eEEecccccccchhhhhcccchhhccccccccCCcccccHHHHHhcCCCCCCCCCCCCccCEEEEEeCCCCCCCCcEEEE
Confidence 33322110 00000 000 0 0001223444443321 1112233467999999999999999999999
Q ss_pred ecHHHHHHhhhhhhhhhhccccCC-CCCEEEEeCChhhHHHHHH-HHHhhhcCcEEEEeCC--CHHHHHHHHHhhCCeEE
Q 014951 148 TNQAIVAEVLSVDQMFVVTGKVCS-EEDTYFSFLPLAHIYDQII-ETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTMF 223 (415)
Q Consensus 148 th~~l~~~~~~~~~~~~~~~~~~~-~~d~~l~~~p~~~~~~~~~-~~~~l~~G~~vv~~~~--~~~~~~~~i~~~~~t~~ 223 (415)
+|.++..........+.. ... ..+.+++.+|++|.+++.. ++..+..|+++++.+. ++..+++.|+++++|++
T Consensus 228 s~~~l~~~~~~~~~~~~~---~~~~~~~~~~~~~pl~h~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~ 304 (562)
T PRK05677 228 THRNLVANMLQCRALMGS---NLNEGCEILIAPLPLYHIYAFTFHCMAMMLIGNHNILISNPRDLPAMVKELGKWKFSGF 304 (562)
T ss_pred ehhHHHHHHHHHHHHhcc---CCCCCccEEEEcCcHHHHHHHHHHHHHHHHcCCeEEEecCcccHHHHHHHHHHcCceEE
Confidence 999998776554433311 122 3478899999999999864 5567778888776653 88999999999999999
Q ss_pred EeCcHHHHHHHHHHHHhhhcCChhhHHHHHHHHHhhhhccccCCCCCCccchhhHHHHHHHHHHhCCceeEEEEecCCCC
Q 014951 224 SGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLP 303 (415)
Q Consensus 224 ~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~~G~~~~ 303 (415)
+++|+++..+.+... ....++ +++|.+++||++++
T Consensus 305 ~~~p~~~~~l~~~~~-------------------------------------~~~~~~--------~~lr~v~~gG~~~~ 339 (562)
T PRK05677 305 VGLNTLFVALCNNEA-------------------------------------FRKLDF--------SALKLTLSGGMALQ 339 (562)
T ss_pred ecHHHHHHHHHhCcc-------------------------------------cccCCh--------hhceEEEEcCccCC
Confidence 999999988754100 000111 37999999999999
Q ss_pred HHHHHHHHHhcCCceEEeeccCCCCceeeeecCCcccccCcccccccCeEEEEeecCCCCCCCCCCCCCCeEEEecCCcc
Q 014951 304 IHVEEFLRVTSGAPLTQGYGLTESCSGCFTSLADVFNMIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLF 383 (415)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~G~~~~g~~~~i~~~~~~~~~~~~~~~~Gel~v~~~~~~ 383 (415)
+++.+.+.+.++.++++.||+||++.++.....+. ..++++|+|+++++++|+| +++. +++.|+.|||+++|+.++
T Consensus 340 ~~~~~~~~~~~~~~v~~~YG~tE~~~~~~~~~~~~-~~~~~vG~~~~~~~v~i~d-~~~~--~~~~g~~Gel~v~g~~~~ 415 (562)
T PRK05677 340 LATAERWKEVTGCAICEGYGMTETSPVVSVNPSQA-IQVGTIGIPVPSTLCKVID-DDGN--ELPLGEVGELCVKGPQVM 415 (562)
T ss_pred HHHHHHHHHHcCCCeeccCCccccCcceeecCccC-CCCCccCccCCCCEEEEEC-CCCC--CCCCCCCeEEEEecCccc
Confidence 99999999989999999999999987665544332 2347899999999999999 6665 455679999999999999
Q ss_pred ccccCCchhhhhhh-cCCceecCceEEEcCCCC
Q 014951 384 SGYYKRPDLTEEVI-VDGWFHTGDIGEWQPMEL 415 (415)
Q Consensus 384 ~gY~~~~~~~~~~~-~~g~~~TGDlg~~d~~G~ 415 (415)
.||+++++.+.+.| .+|||+|||+|++|+||+
T Consensus 416 ~gY~~~~~~t~~~~~~~g~~~TGDlg~~~~~G~ 448 (562)
T PRK05677 416 KGYWQRPEATDEILDSDGWLKTGDIALIQEDGY 448 (562)
T ss_pred hhhcCCchhhhhccCCCCcccccceEEECCCCc
Confidence 99999999999998 589999999999999985
No 40
>PRK10524 prpE propionyl-CoA synthetase; Provisional
Probab=100.00 E-value=1.6e-47 Score=381.58 Aligned_cols=360 Identities=17% Similarity=0.200 Sum_probs=269.9
Q ss_pred CccCCCCCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEcCCC---------hhhhh
Q 014951 1 MRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENK---------IPSIL 71 (415)
Q Consensus 1 L~~~Gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~ii~~~~~---------~~~~~ 71 (415)
|+++|+++||+|+++++|+++++++++||+++|++++|+++.++++++..++++++++++|+++.. .+.+.
T Consensus 101 L~~~Gv~~gd~V~i~~~n~~e~~~~~lA~~~~Gav~v~~~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~ 180 (629)
T PRK10524 101 LRSLGVQRGDRVLIYMPMIAEAAFAMLACARIGAIHSVVFGGFASHSLAARIDDAKPVLIVSADAGSRGGKVVPYKPLLD 180 (629)
T ss_pred HHHcCCCCCCEEEEECCCCHHHHHHHHHHHHhCcEEEeeCCCCCHHHHHHHHHhcCCcEEEEccCcccCCcccccHHHHH
Confidence 467899999999999999999999999999999999999999999999999999999999997642 12222
Q ss_pred hcCccCCCCccEEEEecCCCchhhHHhhhcCceeecHHHHHhcCC-CCCCCCCCCCCCeEEEEecCCCCCCCceEEeecH
Q 014951 72 SCLPRCCLYLKTIVSFANVSSSQKKEAEELGVSCFSWEEFLQLGT-LDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQ 150 (415)
Q Consensus 72 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~th~ 150 (415)
.+..........++.++....... ........+.++..... ...+.....++++++++|||||||.||||+++|.
T Consensus 181 ~~~~~~~~~~~~vi~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~il~TSGTTG~PKgV~~~~~ 256 (629)
T PRK10524 181 EAIALAQHKPRHVLLVDRGLAPMA----RVAGRDVDYATLRAQHLGARVPVEWLESNEPSYILYTSGTTGKPKGVQRDTG 256 (629)
T ss_pred HHHHhcCCCCCEEEEEeCCCCCcC----cccCCcccHHHHHhcCCCCCCCceeeCCCCceEEEeecCCCCCCceEEECCc
Confidence 222111123345555543211000 00011234555443321 1122223467899999999999999999999999
Q ss_pred HHHHHhhh-hhhhhhhccccCCCCCEEEEeCChhhHHHHHH-HHHhhhcCcEEEEeCC-----CHHHHHHHHHhhCCeEE
Q 014951 151 AIVAEVLS-VDQMFVVTGKVCSEEDTYFSFLPLAHIYDQII-ETHCIHKGCSIGFWRG-----DVRYLMEDIQELKPTMF 223 (415)
Q Consensus 151 ~l~~~~~~-~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~-~~~~l~~G~~vv~~~~-----~~~~~~~~i~~~~~t~~ 223 (415)
+++..... ....+ .+.++|++++..|++|..+... ++.+++.|+++++.+. ++..+++.|+++++|++
T Consensus 257 ~~~~~~~~~~~~~~-----~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~G~~~v~~~g~~~~~~~~~~~~~i~~~~vt~~ 331 (629)
T PRK10524 257 GYAVALATSMDTIF-----GGKAGETFFCASDIGWVVGHSYIVYAPLLAGMATIMYEGLPTRPDAGIWWRIVEKYKVNRM 331 (629)
T ss_pred HHHHHHHHHHHHhc-----CCCCCCEEEEcCCCCeeccchHHHHHHHhCCCEEEEECCCCCCCChHHHHHHHHHcCceEE
Confidence 87654433 22223 5678899999999999888654 7788999999988753 68899999999999999
Q ss_pred EeCcHHHHHHHHHHHHhhhcCChhhHHHHHHHHHhhhhccccCCCCCCccchhhHHHHHHHHHHhCCceeEEEEecCCCC
Q 014951 224 SGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLP 303 (415)
Q Consensus 224 ~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~~G~~~~ 303 (415)
+++|++++.+.+.... .....++ ++||.+++||++++
T Consensus 332 ~~~P~~~~~l~~~~~~-----------------------------------~~~~~~l--------~~lr~i~~~Ge~l~ 368 (629)
T PRK10524 332 FSAPTAIRVLKKQDPA-----------------------------------LLRKHDL--------SSLRALFLAGEPLD 368 (629)
T ss_pred EeCHHHHHHHHhcCcc-----------------------------------cccccCh--------hheeEEEEeCCCCC
Confidence 9999999887541000 0011111 38999999999999
Q ss_pred HHHHHHHHHhcCCceEEeeccCCCCceeeeecCC---cccccCcccccccCeEEEEeecC-CCCCCCCCCCCCCeEEEec
Q 014951 304 IHVEEFLRVTSGAPLTQGYGLTESCSGCFTSLAD---VFNMIGTVGVPMTTVEARLESVP-EMGYDALSSVPRGEICLRG 379 (415)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~~---~~~~~~~~G~~~~g~~~~i~~~~-~~~~~~~~~~~~Gel~v~~ 379 (415)
+++.+++.+.++.++++.||+||++..+...... .....+++|+|++|++++|+| + ++.. ++.|+.|||+++|
T Consensus 369 ~~~~~~~~~~~~~~v~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~G~p~~g~~~~i~d-~~~g~~--~~~g~~Gel~i~g 445 (629)
T PRK10524 369 EPTASWISEALGVPVIDNYWQTETGWPILAIARGVEDRPTRLGSPGVPMYGYNVKLLN-EVTGEP--CGPNEKGVLVIEG 445 (629)
T ss_pred HHHHHHHHHhcCCCeEeccccccccchhhcCCCCcccCcCCCCCcccCcCCceEEEEe-CCCCCC--CCCCCcEEEEEcC
Confidence 9999999999999999999999998533322211 122358999999999999999 6 6644 5667999999999
Q ss_pred C---CccccccCCchhhhhhh----cCCceecCceEEEcCCCC
Q 014951 380 N---TLFSGYYKRPDLTEEVI----VDGWFHTGDIGEWQPMEL 415 (415)
Q Consensus 380 ~---~~~~gY~~~~~~~~~~~----~~g~~~TGDlg~~d~~G~ 415 (415)
| +++.+||++++.+.+.+ .+|||+|||+|++|+||+
T Consensus 446 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TGDl~~~d~dG~ 488 (629)
T PRK10524 446 PLPPGCMQTVWGDDDRFVKTYWSLFGRQVYSTFDWGIRDADGY 488 (629)
T ss_pred CCChhhcCCccCChHHHHHhhhccCCCcEEEcCCcEEEcCCCc
Confidence 8 57899999998776654 368999999999999995
No 41
>PRK07638 acyl-CoA synthetase; Validated
Probab=100.00 E-value=4e-47 Score=368.19 Aligned_cols=331 Identities=15% Similarity=0.181 Sum_probs=266.8
Q ss_pred ccCCCCCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEcCCChhhhhhcCccCCCCc
Q 014951 2 RSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYL 81 (415)
Q Consensus 2 ~~~Gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~ 81 (415)
.+.| .+||+|+|+++|++++++++|||+++|++++|+++.++++++..+++.++++++|++......+....
T Consensus 44 ~~~~-~~~~~v~i~~~~~~~~~~~~la~~~~G~~~v~l~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~------- 115 (487)
T PRK07638 44 NEKE-SKNKTIAILLENRIEFLQLFAGAAMAGWTCVPLDIKWKQDELKERLAISNADMIVTERYKLNDLPDEE------- 115 (487)
T ss_pred HHhC-CCCCEEEEEcCCCHHHHHHHHHHHHcCeEEEecCccCCHHHHHHHHHhCCCCEEEEecccccchhhcc-------
Confidence 3456 48999999999999999999999999999999999999999999999999999999986544432110
Q ss_pred cEEEEecCCCchhhHHhhhcCceeecHHHHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEeecHHHHHHhhhhhh
Q 014951 82 KTIVSFANVSSSQKKEAEELGVSCFSWEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQ 161 (415)
Q Consensus 82 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~~~~~ 161 (415)
..++.++ .+.+................+++++|+|||||||.||+|+++|+++..++.....
T Consensus 116 ~~~~~~~------------------~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PKgv~~s~~~~~~~~~~~~~ 177 (487)
T PRK07638 116 GRVIEID------------------EWKRMIEKYLPTYAPIENVQNAPFYMGFTSGSTGKPKAFLRAQQSWLHSFDCNVH 177 (487)
T ss_pred ceEEEeh------------------hhhhhhhhccccccccccCCCCcEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHH
Confidence 1222221 1111111111111111223567899999999999999999999999988877655
Q ss_pred hhhhccccCCCCCEEEEeCChhhHHHHHHHHHhhhcCcEEEEeCC-CHHHHHHHHHhhCCeEEEeCcHHHHHHHHHHHHh
Q 014951 162 MFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG-DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNK 240 (415)
Q Consensus 162 ~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~vv~~~~-~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~ 240 (415)
.+ .+..+|+++...|++|..++...+.+++.|+++++.+. ++..+++.|+++++|++.++|+++..+.+..
T Consensus 178 ~~-----~~~~~d~~~~~~~l~~~~~l~~~~~~l~~g~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~--- 249 (487)
T PRK07638 178 DF-----HMKREDSVLIAGTLVHSLFLYGAISTLYVGQTVHLMRKFIPNQVLDKLETENISVMYTVPTMLESLYKEN--- 249 (487)
T ss_pred hc-----CcCCCCEEEEeecchHHHHHHHHHHHHccCcEEEEcCCCCHHHHHHHHHHcCCeEEEeCcHHHHHHHhCc---
Confidence 55 67889999999999998887778888999999998876 9999999999999999999999999886510
Q ss_pred hhcCChhhHHHHHHHHHhhhhccccCCCCCCccchhhHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHHHhc-CCceE
Q 014951 241 ISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTS-GAPLT 319 (415)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~~G~~~~~~~~~~~~~~~-~~~~~ 319 (415)
.. ..+.+.++++|+++++++.+++.+.+ +.+++
T Consensus 250 ----------------------------------~~------------~~~~~~~~~~G~~l~~~~~~~~~~~~~~~~~~ 283 (487)
T PRK07638 250 ----------------------------------RV------------IENKMKIISSGAKWEAEAKEKIKNIFPYAKLY 283 (487)
T ss_pred ----------------------------------Cc------------CCceeEEEEcCCCCCHHHHHHHHHHcCCCeEE
Confidence 00 02456678899999999999999888 67899
Q ss_pred EeeccCCCCceeeeecCCcccccCcccccccCeEEEEeecCCCCCCCCCCCCCCeEEEecCCccccccCCchhhhhhhcC
Q 014951 320 QGYGLTESCSGCFTSLADVFNMIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVIVD 399 (415)
Q Consensus 320 ~~yG~tE~~~~~~~~~~~~~~~~~~~G~~~~g~~~~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gY~~~~~~~~~~~~~ 399 (415)
+.||+||++.++...........+++|+|++|++++|+| +++. +++.|+.|||+++|+.++.||+++++.+.+.+.+
T Consensus 284 ~~YG~tE~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d-~~g~--~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~ 360 (487)
T PRK07638 284 EFYGASELSFVTALVDEESERRPNSVGRPFHNVQVRICN-EAGE--EVQKGEIGTVYVKSPQFFMGYIIGGVLARELNAD 360 (487)
T ss_pred EEecCCccCceEEecccccCCCCCCCCcccCCcEEEEEC-CCCC--CCCCCCCeEEEEecccceeeecCCHHHHhhhccC
Confidence 999999999876655433334457999999999999999 6665 4566799999999999999999999988887789
Q ss_pred CceecCceEEEcCCCC
Q 014951 400 GWFHTGDIGEWQPMEL 415 (415)
Q Consensus 400 g~~~TGDlg~~d~~G~ 415 (415)
|||+|||+|++|+||+
T Consensus 361 g~~~TGDl~~~d~~g~ 376 (487)
T PRK07638 361 GWMTVRDVGYEDEEGF 376 (487)
T ss_pred CcEecCccEeEcCCCe
Confidence 9999999999999985
No 42
>TIGR01217 ac_ac_CoA_syn acetoacetyl-CoA synthase. This enzyme catalyzes the first step of the mevalonate pathway of IPP biosynthesis. Most bacteria do not use this pathway, but rather the deoxyxylulose pathway.
Probab=100.00 E-value=1.9e-47 Score=380.85 Aligned_cols=359 Identities=18% Similarity=0.204 Sum_probs=263.3
Q ss_pred CccCCCCCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEcCCC---------hhhhh
Q 014951 1 MRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENK---------IPSIL 71 (415)
Q Consensus 1 L~~~Gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~ii~~~~~---------~~~~~ 71 (415)
|++.|+++||+|+++++|++++++++|||+++|++++|+++.++++++.+++++++++++|+++.. .+.+.
T Consensus 131 L~~~Gv~~GdrV~i~~~n~~e~~~~~lA~~~~Gav~vp~~~~~~~~~l~~~l~~~~~k~li~~~~~~~~~k~~~~~~~~~ 210 (652)
T TIGR01217 131 LRALGVRPGDRVSGYLPNIPQAVVAMLATASVGAIWSSCSPDFGARGVLDRFQQIEPKLLFTVDGYRYNGKEHDRRDKVA 210 (652)
T ss_pred HHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHhCeEEEecCCCCCHHHHHHHHHhcCCcEEEEccccccCCcccchHHHHH
Confidence 467899999999999999999999999999999999999999999999999999999999998754 22333
Q ss_pred hcCccCCCCccEEEEecCCCchhhHHhhhcCceeecHHHHHhcC-CCCCCCCCCCCCCeEEEEecCCCCCCCceEEeecH
Q 014951 72 SCLPRCCLYLKTIVSFANVSSSQKKEAEELGVSCFSWEEFLQLG-TLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQ 150 (415)
Q Consensus 72 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~th~ 150 (415)
++... .+.++.++.+.......... ........++++.... ...........+|+++|+|||||||.||||+++|.
T Consensus 211 ~~~~~-~~~~~~~i~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ilyTSGTTG~PKgV~~sh~ 287 (652)
T TIGR01217 211 EVRKE-LPTLRAVVHIPYLGPRETEA--PKIDGALDLEDFTAAAQAAELVFEQLPFDHPLWILFSSGTTGLPKCIVHSAG 287 (652)
T ss_pred HHHhc-CCCccEEEEEeCCCCccccc--ccccCcccHHHHHhcccCCCCCceecCCCCCEEEEEcCCCCCCCCeEEeccc
Confidence 32222 23445566554321100000 0001234566665432 11222334567899999999999999999999999
Q ss_pred HHHHH-hhhhhhhhhhccccCCCCCEEEEeCChhhHHHHHHHHHhhhcCcEEEEeCC-----CHHHHHHHHHhhCCeEEE
Q 014951 151 AIVAE-VLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG-----DVRYLMEDIQELKPTMFS 224 (415)
Q Consensus 151 ~l~~~-~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~vv~~~~-----~~~~~~~~i~~~~~t~~~ 224 (415)
+++.. .......+ .+.++|++++..|+.|... ..++.+++.|+++++.+. ++..+++.++++++|++.
T Consensus 288 ~~~~~~~~~~~~~~-----~~~~~d~~~~~~~~~~~~~-~~~~~~l~~G~t~vl~~g~~~~~~~~~~~~~i~~~~vt~~~ 361 (652)
T TIGR01217 288 GTLVQHLKEHGLHC-----DLGPGDRLFYYTTTGWMMW-NWLVSGLATGATLVLYDGSPGFPATNVLWDIAERTGATLFG 361 (652)
T ss_pred HHHHHHHHHHHhcc-----CCCCCcEEEEeCCcchhhh-HHHHHHHhcCcEEEEECCCCCCCCchHHHHHHHHhCCeEEe
Confidence 87643 33332223 6788999999999999754 335578999999999753 678999999999999987
Q ss_pred eCcHHHHHHHHHHHHhhhcCChhhHHHHHHHHHhhhhccccCCCCCCccchhhHHHHHHHHHHhCCceeEEEEecCCCCH
Q 014951 225 GVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPI 304 (415)
Q Consensus 225 ~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~~G~~~~~ 304 (415)
.+|.+++.+.+. . . .+ ....++ ++||.+++||+++++
T Consensus 362 ~~p~~~~~l~~~-~--~-------------------------------~~-~~~~~l--------~sLr~i~~gGe~l~~ 398 (652)
T TIGR01217 362 TSAKYVMACRKA-G--V-------------------------------HP-ARTHDL--------SALQCVASTGSPLPP 398 (652)
T ss_pred cCHHHHHHHHhc-C--C-------------------------------Cc-cccCCh--------hheeEEEeecCCCCH
Confidence 777776655320 0 0 00 011112 389999999999999
Q ss_pred HHHHHHHHhcC--CceEEeeccCCCCceeeeecCCcccccCcccccccCeEEEEeecCCCCCCCCCCCCCCeEEEecC--
Q 014951 305 HVEEFLRVTSG--APLTQGYGLTESCSGCFTSLADVFNMIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGN-- 380 (415)
Q Consensus 305 ~~~~~~~~~~~--~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~G~~~~g~~~~i~~~~~~~~~~~~~~~~Gel~v~~~-- 380 (415)
++.+++.+.++ ..+.+.||+||++.......+......+++|.|.+|++++|+| +++..+ .|+.|||+++||
T Consensus 399 ~~~~~~~~~~~~~~~~~~~yG~TE~~~~~~~~~~~~~~~~g~~g~p~~g~~v~ivd-~~g~~~---~g~~GEl~v~gp~p 474 (652)
T TIGR01217 399 DGFRWVYDEIKADVWLASISGGTDICSCFAGANPTLPVHIGEIQAPGLGTAVQSWD-PEGKPV---TGEVGELVCTNPMP 474 (652)
T ss_pred HHHHHHHHHhCCCceEEeccCHHHHhccccCCCCCCCCcCCccCCCcCCCceEEEC-CCCCCC---CCCccEEEEecCCC
Confidence 99999988876 4577899999975433322222222348899999999999999 777654 379999999996
Q ss_pred CccccccCCchhhh--hh-h--cCCceecCceEEEcCCCC
Q 014951 381 TLFSGYYKRPDLTE--EV-I--VDGWFHTGDIGEWQPMEL 415 (415)
Q Consensus 381 ~~~~gY~~~~~~~~--~~-~--~~g~~~TGDlg~~d~~G~ 415 (415)
+++.|||++++.+. +. | .+|||+|||+|++|+||+
T Consensus 475 ~~~~gy~~~~~~t~~~~~~~~~~~g~~~tGDlg~~d~dG~ 514 (652)
T TIGR01217 475 SMPIRFWNDPDGSKYRDAYFDTYPGVWRHGDWITLTPRGG 514 (652)
T ss_pred ccccceeCCCccchhHHhhhcCCCCEEEcCCcEEECCCCc
Confidence 68999999998654 23 2 268999999999999996
No 43
>PRK06060 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.1e-47 Score=387.04 Aligned_cols=327 Identities=20% Similarity=0.275 Sum_probs=261.0
Q ss_pred CccCCCCCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEcCCChhhhhhcCccCCCC
Q 014951 1 MRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLY 80 (415)
Q Consensus 1 L~~~Gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~ 80 (415)
|.++|+++||+|+++++|+++++++++||+++|++++|++|.++.+++.+++++++++++|++.+....+...
T Consensus 47 L~~~g~~~g~~V~i~~~~~~~~~~~~la~~~aG~~~vpi~p~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~------- 119 (705)
T PRK06060 47 LRNRGLSSGDRVLLCLPDSPDLVQLLLACLARGVMAFLANPELHRDDHALAARNTEPALVVTSDALRDRFQPS------- 119 (705)
T ss_pred HHHcCCCCCCEEEEECCCCHHHHHHHHHHHHhCcEEEecCCCCCHHHHHHHHhcCCCcEEEEchHHhhhhccc-------
Confidence 4578999999999999999999999999999999999999999999999999999999999987544332110
Q ss_pred ccEEEEecCCCchhhHHhhhcCceeecHHHHHhcC--CCCCCCCCCCCCCeEEEEecCCCCCCCceEEeecHHHHHHhhh
Q 014951 81 LKTIVSFANVSSSQKKEAEELGVSCFSWEEFLQLG--TLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLS 158 (415)
Q Consensus 81 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~~ 158 (415)
.++ ...++.... ..+....+..++++++++|||||||.||+|.++|+++...+..
T Consensus 120 --~~~---------------------~~~~~~~~~~~~~~~~~~~~~~~~~a~il~TSGSTG~PKgV~~sh~~~~~~~~~ 176 (705)
T PRK06060 120 --RVA---------------------EAAELMSEAARVAPGGYEPMGGDALAYATYTSGTTGPPKAAIHRHADPLTFVDA 176 (705)
T ss_pred --ccc---------------------hhhhhhhhccccCCCCCCCCCCCCeEEEEECCCCCCCCcEEEEccccHHHHHHH
Confidence 000 000111000 0111122345789999999999999999999999999887765
Q ss_pred hh-hhhhhccccCCCCCEEEEeCChhhHHHHH-HHHHhhhcCcEEEEeCC--CHHHHHHHHHhhCCeEEEeCcHHHHHHH
Q 014951 159 VD-QMFVVTGKVCSEEDTYFSFLPLAHIYDQI-IETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTMFSGVPRVYDRIY 234 (415)
Q Consensus 159 ~~-~~~~~~~~~~~~~d~~l~~~p~~~~~~~~-~~~~~l~~G~~vv~~~~--~~~~~~~~i~~~~~t~~~~~P~~~~~l~ 234 (415)
+. ..+ .+...|++++..|++|.+++. .++.++..|+++++.+. ++..++..++++++|+++++|+++..++
T Consensus 177 ~~~~~~-----~~~~~d~~l~~~~~~~~~~~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~i~~~~~t~~~~~P~~l~~l~ 251 (705)
T PRK06060 177 MCRKAL-----RLTPEDTGLCSARMYFAYGLGNSVWFPLATGGSAVINSAPVTPEAAAILSARFGPSVLYGVPNFFARVI 251 (705)
T ss_pred HHHHhh-----CCCCcceeEEeccchhhcchhHHHHHHHhcCCEEEEeCCCCCHHHHHHHHHhcCCeEEeeHHHHHHHHH
Confidence 43 223 667889999999999988875 46778999999998864 8888999999999999999999998876
Q ss_pred HHHHHhhhcCChhhHHHHHHHHHhhhhccccCCCCCCccchhhHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHHHhc
Q 014951 235 TGISNKISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTS 314 (415)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~~G~~~~~~~~~~~~~~~ 314 (415)
+.... .+ .+++|.+++||+++++++.+.+.+.+
T Consensus 252 ~~~~~---------------------------------------~~--------~~slr~i~~gGe~l~~~~~~~~~~~~ 284 (705)
T PRK06060 252 DSCSP---------------------------------------DS--------FRSLRCVVSAGEALELGLAERLMEFF 284 (705)
T ss_pred Hhccc---------------------------------------cc--------ccceeEEEEecCcCCHHHHHHHHHHc
Confidence 42100 00 13799999999999999999999888
Q ss_pred C-CceEEeeccCCCCceeeeecCCcccccCcccccccCeEEEEeecCCCCCCCCCCCCCCeEEEecCCccccccCCchhh
Q 014951 315 G-APLTQGYGLTESCSGCFTSLADVFNMIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLT 393 (415)
Q Consensus 315 ~-~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~G~~~~g~~~~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gY~~~~~~~ 393 (415)
+ .++++.||+||++..+.....+.. ..+++|+|+++++++|+| +++. +++.|+.|||+|+|++++.|||++++.+
T Consensus 285 ~~~~~~~~YG~tE~~~~~~~~~~~~~-~~~~iG~p~~~~~v~i~d-~~g~--~~~~g~~GEl~i~g~~v~~GY~~~~~~~ 360 (705)
T PRK06060 285 GGIPILDGIGSTEVGQTFVSNRVDEW-RLGTLGRVLPPYEIRVVA-PDGT--TAGPGVEGDLWVRGPAIAKGYWNRPDSP 360 (705)
T ss_pred CCCceEeeeeccccCceEEeccCCCC-CcCcccccCCCcEEEEEC-CCCC--CCCCCCceEEEEccchhhhhhhCCCccc
Confidence 4 799999999999866544333222 347899999999999999 6664 4556799999999999999999999865
Q ss_pred hhhhcCCceecCceEEEcCCCC
Q 014951 394 EEVIVDGWFHTGDIGEWQPMEL 415 (415)
Q Consensus 394 ~~~~~~g~~~TGDlg~~d~~G~ 415 (415)
.. .+|||+|||+|++|+||+
T Consensus 361 ~~--~~~~~~TGDl~~~~~dG~ 380 (705)
T PRK06060 361 VA--NEGWLDTRDRVCIDSDGW 380 (705)
T ss_pred cc--CCCcEECCeeEEECCCce
Confidence 32 479999999999999985
No 44
>TIGR02275 DHB_AMP_lig 2,3-dihydroxybenzoate-AMP ligase. Proteins in this family belong to the AMP-binding enzyme family (pfam00501). Members activate 2,3-dihydroxybenzoate (DHB) by ligation of AMP from ATP with the release of pyrophosphate; many are involved in synthesis of siderophores such as enterobactin, vibriobactin, vulnibactin, etc. The most closely related proteine believed to differ in function activates salicylate rather than DHB.
Probab=100.00 E-value=3.9e-47 Score=371.60 Aligned_cols=350 Identities=19% Similarity=0.206 Sum_probs=271.0
Q ss_pred CccCCCCCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEcCCChh----hhhhcCcc
Q 014951 1 MRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIP----SILSCLPR 76 (415)
Q Consensus 1 L~~~Gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~----~~~~~~~~ 76 (415)
|.+.|+++||+|+++++|+++++++++||+++|++++++++..+.+++.++++.+++++++++..... .+......
T Consensus 65 L~~~g~~~g~~V~i~~~~~~~~~~~~la~~~~G~~~v~~~~~~~~~~~~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~ 144 (527)
T TIGR02275 65 LTKLGIGQGDTAVVQLPNIAEFYIVFFALLKLGIAPVLALFSHRKSELTAYAQQIEPALYIIDRAHSLFDYDAFARQLQS 144 (527)
T ss_pred HHHcCCCCCCEEEEECCCcHHHHHHHHHHHHcCeEEeccccccCHHHHHHHHHhcCCcEEEEcCcccccchHHHHHHHHh
Confidence 45789999999999999999999999999999999999999999999999999999999999875421 11111111
Q ss_pred CCCCccEEEEecCCCchhhHHhhhcCceeecHHHHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEeecHHHHHHh
Q 014951 77 CCLYLKTIVSFANVSSSQKKEAEELGVSCFSWEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEV 156 (415)
Q Consensus 77 ~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~ 156 (415)
..+..+.++....... .....................++++++++|||||||.||+|++||.++..++
T Consensus 145 ~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~~ 212 (527)
T TIGR02275 145 KLPTLRNIIVAGQTRV------------EAELFLWLESPAEPVKFPPTKSDEVAFFQLSGGSTGTPKLIPRTHNDYYYSV 212 (527)
T ss_pred hCCcceEEEEecCCCC------------cchhhHHhhCcCccccCCCCCCCccEEEEeCCCCCCCCceeeeehHHHHHHH
Confidence 1123344444322100 0001111111111122334567899999999999999999999999999888
Q ss_pred hhhhhhhhhccccCCCCCEEEEeCChhhHHHHHH--HHHhhhcCcEEEEeCC-CHHHHHHHHHhhCCeEEEeCcHHHHHH
Q 014951 157 LSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQII--ETHCIHKGCSIGFWRG-DVRYLMEDIQELKPTMFSGVPRVYDRI 233 (415)
Q Consensus 157 ~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~--~~~~l~~G~~vv~~~~-~~~~~~~~i~~~~~t~~~~~P~~~~~l 233 (415)
......+ .+..+|++++.+|++|.+++.. .+.+++.|+++++.+. ++..+++.++++++|++.++|.++..+
T Consensus 213 ~~~~~~~-----~~~~~d~~l~~~P~~h~~~~~~~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l 287 (527)
T TIGR02275 213 RRSVEIC-----WLTQQTRYLCALPAAHNYPLSSPGALGVFYAGGCVVLAPDPSPTDCFPLIERHKVTVTALVPPAVALW 287 (527)
T ss_pred HHHHhhc-----CCCcCCEEEECCChHhhhhhhHHHHHHHHhcCCeEEECCCCCHHHHHHHHHHhCCeEEEecHHHHHHH
Confidence 7766555 6778999999999999998764 6678899999988765 899999999999999999999999887
Q ss_pred HHHHHHhhhcCChhhHHHHHHHHHhhhhccccCCCCCCccchhhHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHHHh
Q 014951 234 YTGISNKISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVT 313 (415)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~~G~~~~~~~~~~~~~~ 313 (415)
.+...... .+ .+++|.+++||+++++++.+++.+.
T Consensus 288 ~~~~~~~~-------------------------------------~~--------~~~lr~~~~gG~~l~~~~~~~~~~~ 322 (527)
T TIGR02275 288 MQAASKSR-------------------------------------YD--------LSSLKLLQVGGAKFSEAAARRVPAV 322 (527)
T ss_pred HhCccccC-------------------------------------CC--------ccceEEEEEcCCCCCHHHHHHHHHH
Confidence 65221100 00 1379999999999999999999998
Q ss_pred cCCceEEeeccCCCCceeeeecCCcccccCcccccc-cCeEEEEeecCCCCCCCCCCCCCCeEEEecCCccccccCCchh
Q 014951 314 SGAPLTQGYGLTESCSGCFTSLADVFNMIGTVGVPM-TTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDL 392 (415)
Q Consensus 314 ~~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~G~~~-~g~~~~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gY~~~~~~ 392 (415)
++.++++.||+||++..............+++|+|+ +++.++|+| +++. +++.|+.|||+++|+.++.||+++++.
T Consensus 323 ~g~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~G~~~~~~~~v~i~d-~~g~--~~~~g~~Gei~v~g~~~~~gY~~~~~~ 399 (527)
T TIGR02275 323 FGCQLQQVFGMAEGLVNYTRLDDPAEIIFTTQGRPMSPDDEVRVVD-DHGN--PVAPGETGMLLTRGPYTFRGYYKAPEH 399 (527)
T ss_pred hCCeEEeeeccCccCccccCCCCccccccccCCCCCCCCceEEEEC-CCCC--CCCCCCceEEEecCCccchhhcCChhH
Confidence 999999999999965433221111122346899999 589999999 6665 445679999999999999999999999
Q ss_pred hhhhh-cCCceecCceEEEcCCCC
Q 014951 393 TEEVI-VDGWFHTGDIGEWQPMEL 415 (415)
Q Consensus 393 ~~~~~-~~g~~~TGDlg~~d~~G~ 415 (415)
+.+.| .+|||+|||+|++|+||+
T Consensus 400 ~~~~~~~dg~~~TGDl~~~~~~g~ 423 (527)
T TIGR02275 400 NAAAFDAEGFYYTGDLVRLTPEGY 423 (527)
T ss_pred hHhhcCcCCCEEcCceEEEcCCcc
Confidence 98888 689999999999999985
No 45
>PRK03584 acetoacetyl-CoA synthetase; Provisional
Probab=100.00 E-value=2.6e-47 Score=381.49 Aligned_cols=358 Identities=20% Similarity=0.218 Sum_probs=267.2
Q ss_pred CccCCCCCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEcCCCh---------hhhh
Q 014951 1 MRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKI---------PSIL 71 (415)
Q Consensus 1 L~~~Gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~---------~~~~ 71 (415)
|++.|+++||+|+++++|++++++++|||+++|++++|+++.++++++.++++.++++++|+++... +.+.
T Consensus 131 L~~~Gv~~gd~V~i~~~n~~e~v~~~lA~~~~Gav~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~ 210 (655)
T PRK03584 131 LRALGVGPGDRVAAYLPNIPETVVAMLATASLGAIWSSCSPDFGVQGVLDRFGQIEPKVLIAVDGYRYGGKAFDRRAKVA 210 (655)
T ss_pred HHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCcEEEeeCCCCCHHHHHHHHHHcCCcEEEEccccccCCcccchHHHHH
Confidence 4578999999999999999999999999999999999999999999999999999999999987532 2222
Q ss_pred hcCccCCCCccEEEEecCCCchhhHHhhhcCceeecHHHHHhcC-CCCCCCCCCCCCCeEEEEecCCCCCCCceEEeecH
Q 014951 72 SCLPRCCLYLKTIVSFANVSSSQKKEAEELGVSCFSWEEFLQLG-TLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQ 150 (415)
Q Consensus 72 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~th~ 150 (415)
.... ..+.++.++.++...... ..........|+++.... .......+...+++++|+|||||||.||||++||.
T Consensus 211 ~~~~-~~~~~~~~i~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ilyTSGTTG~PKgV~~sh~ 286 (655)
T PRK03584 211 ELRA-ALPSLEHVVVVPYLGPAA---AAAALPGALLWEDFLAPAEAAELEFEPVPFDHPLWILYSSGTTGLPKCIVHGHG 286 (655)
T ss_pred HHHh-cCCCccEEEEEecCCCcc---cccccCCcccHHHHhhccccCCCCceecCCCCcEEEEecCCCCCCCceEEECcc
Confidence 2211 123344555554321100 000111234466655422 11222344567999999999999999999999999
Q ss_pred HHHHH-hhhhhhhhhhccccCCCCCEEEEeCChhhHHHHHHHHHhhhcCcEEEEeCC-----CHHHHHHHHHhhCCeEEE
Q 014951 151 AIVAE-VLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG-----DVRYLMEDIQELKPTMFS 224 (415)
Q Consensus 151 ~l~~~-~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~vv~~~~-----~~~~~~~~i~~~~~t~~~ 224 (415)
+++.+ .......+ .+.++|++++..++.|..+. ..+.+++.|+++++.+. ++..+++.++++++|++.
T Consensus 287 ~~~~~~~~~~~~~~-----~~~~~d~~~~~~~~~~~~~~-~~~~~L~~G~t~vl~~~~~~~~~~~~~~~~i~~~~vt~~~ 360 (655)
T PRK03584 287 GILLEHLKELGLHC-----DLGPGDRFFWYTTCGWMMWN-WLVSGLLVGATLVLYDGSPFYPDPNVLWDLAAEEGVTVFG 360 (655)
T ss_pred HHHHHHHHHHHHhc-----CCCCCCEEEEcCCchHHhHH-HHHHHHHcCCEEEEeCCCCCCCCHHHHHHHHHHHCCEEEE
Confidence 87644 33333333 67889999999999987543 45678999999998752 789999999999999999
Q ss_pred eCcHHHHHHHHHHHHhhhcCChhhHHHHHHHHHhhhhccccCCCCCCccchhhHHHHHHHHHHhCCceeEEEEecCCCCH
Q 014951 225 GVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPI 304 (415)
Q Consensus 225 ~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~~G~~~~~ 304 (415)
++|++++.+.+.-. .+ ....++ ++||.+++||+++++
T Consensus 361 ~~P~~~~~l~~~~~----------------------------------~~-~~~~~l--------~sLr~i~~~Ge~l~~ 397 (655)
T PRK03584 361 TSAKYLDACEKAGL----------------------------------VP-GETHDL--------SALRTIGSTGSPLPP 397 (655)
T ss_pred cCHHHHHHHHhcCC----------------------------------Cc-cccCCh--------hheEEEEEecCCCCH
Confidence 99999988754100 00 000111 389999999999999
Q ss_pred HHHHHHHHhc--CCceEEeeccCCCCceeeeecCCcccccCcccccccCeEEEEeecCCCCCCCCCCCCCCeEEEecC--
Q 014951 305 HVEEFLRVTS--GAPLTQGYGLTESCSGCFTSLADVFNMIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGN-- 380 (415)
Q Consensus 305 ~~~~~~~~~~--~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~G~~~~g~~~~i~~~~~~~~~~~~~~~~Gel~v~~~-- 380 (415)
++.+++.+.+ ++.+.+.||+||++..+....+......+++|.|.+|++++|+| +++..+ .++.|||+|+||
T Consensus 398 ~~~~~~~~~~~~~~~~~~~yG~TE~~~~~~~~~~~~~~~~g~~g~p~~g~~~~ivd-~~g~~~---~g~~GeL~v~gp~p 473 (655)
T PRK03584 398 EGFDWVYEHVKADVWLASISGGTDICSCFVGGNPLLPVYRGEIQCRGLGMAVEAWD-EDGRPV---VGEVGELVCTKPFP 473 (655)
T ss_pred HHHHHHHHHhCCCceEEeccChHhhhcccccCCCCCCcCCCccCCCcCCceeEEEC-CCCCCC---CCCceEEEEccCCC
Confidence 9999999887 47899999999986544332222223358899999999999999 777644 569999999996
Q ss_pred CccccccCCchhhh--hhh---cCCceecCceEEEcCCCC
Q 014951 381 TLFSGYYKRPDLTE--EVI---VDGWFHTGDIGEWQPMEL 415 (415)
Q Consensus 381 ~~~~gY~~~~~~~~--~~~---~~g~~~TGDlg~~d~~G~ 415 (415)
+++.|||++++.+. ..+ .+|||+|||+|++|+||+
T Consensus 474 ~~~~gy~~~~~~~~~~~~~~~~~~g~~~TGDl~~~d~dG~ 513 (655)
T PRK03584 474 SMPLGFWNDPDGSRYRDAYFDTFPGVWRHGDWIEITEHGG 513 (655)
T ss_pred CCcceeeCCCccchHHHhhhccCCCEeecCCeEEECCCCe
Confidence 78999999997543 222 268999999999999995
No 46
>PRK07786 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=3.9e-47 Score=372.69 Aligned_cols=350 Identities=25% Similarity=0.319 Sum_probs=280.6
Q ss_pred CccCCCCCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEcCCChhhhhhcCccCCCC
Q 014951 1 MRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLY 80 (415)
Q Consensus 1 L~~~Gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~ 80 (415)
|.+.|+++||+|+++++|+++++++++||+++|++++|+++.++.+++..+++.++++++|++......+..... ..+.
T Consensus 59 L~~~g~~~g~~V~i~~~~~~~~~~~~~a~~~~G~~~vpl~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~-~~~~ 137 (542)
T PRK07786 59 LSRRGVGFGDRVLILMLNRTEFVESVLAANMLGAIAVPVNFRLTPPEIAFLVSDCGAHVVVTEAALAPVATAVRD-IVPL 137 (542)
T ss_pred HHHcCCCCCCEEEEECCCCHHHHHHHHHHHHcCeEEEEcCccCCHHHHHHHHHhCCCcEEEEccchHHHHHHhhh-ccCc
Confidence 346799999999999999999999999999999999999999999999999999999999999876655433222 2234
Q ss_pred ccEEEEecCCCchhhHHhhhcCceeecHHHHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEeecHHHHHHhhhhh
Q 014951 81 LKTIVSFANVSSSQKKEAEELGVSCFSWEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVD 160 (415)
Q Consensus 81 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~~~~ 160 (415)
.+.++...+... .....++++...............+++++++|||||||.||+|.++|+++...+....
T Consensus 138 ~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~ 207 (542)
T PRK07786 138 LSTVVVAGGSSD----------DSVLGYEDLLAEAGPAHAPVDIPNDSPALIMYTSGTTGRPKGAVLTHANLTGQAMTCL 207 (542)
T ss_pred cceEEEecCCCc----------ccccCHHHHhhccCCCCCCCCCCCCCeEEEEeCCCCCccchhhhhhHHHHHHHHHHHH
Confidence 455555543210 1224555555433222223345567899999999999999999999999988877655
Q ss_pred hhhhhccccC-CCCCEEEEeCChhhHHHHHHHHHhhhcCcEEEEeCC---CHHHHHHHHHhhCCeEEEeCcHHHHHHHHH
Q 014951 161 QMFVVTGKVC-SEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG---DVRYLMEDIQELKPTMFSGVPRVYDRIYTG 236 (415)
Q Consensus 161 ~~~~~~~~~~-~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~vv~~~~---~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~ 236 (415)
..+ .+ ...+++++..|++|.+++..++.++..|+++++.+. ++..+++.|+++++|.++++|+++..+...
T Consensus 208 ~~~-----~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~l~~l~~~ 282 (542)
T PRK07786 208 RTN-----GADINSDVGFVGVPLFHIAGIGSMLPGLLLGAPTVIYPLGAFDPGQLLDVLEAEKVTGIFLVPAQWQAVCAE 282 (542)
T ss_pred Hhc-----CCCCCCceEEEecchHHHHHHHHHHHHHHccCEEEEccCCCcCHHHHHHHHHHcCCeEEEehHHHHHHHHhC
Confidence 444 33 567899999999999998778889999999998652 899999999999999999999999988642
Q ss_pred HHHhhhcCChhhHHHHHHHHHhhhhccccCCCCCCccchhhHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHHHhc-C
Q 014951 237 ISNKISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTS-G 315 (415)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~~G~~~~~~~~~~~~~~~-~ 315 (415)
.... .. ..++|.+++||+++++++.+++.+.+ +
T Consensus 283 ~~~~-----------------------------------~~-----------~~~lr~i~~gg~~~~~~~~~~~~~~~~~ 316 (542)
T PRK07786 283 QQAR-----------------------------------PR-----------DLALRVLSWGAAPASDTLLRQMAATFPE 316 (542)
T ss_pred cccC-----------------------------------cc-----------CcceEEEEECCCCCCHHHHHHHHHHcCC
Confidence 1100 00 01689999999999999999999888 6
Q ss_pred CceEEeeccCCCCceeeeecCC-cccccCcccccccCeEEEEeecCCCCCCCCCCCCCCeEEEecCCccccccCCchhhh
Q 014951 316 APLTQGYGLTESCSGCFTSLAD-VFNMIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTE 394 (415)
Q Consensus 316 ~~~~~~yG~tE~~~~~~~~~~~-~~~~~~~~G~~~~g~~~~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gY~~~~~~~~ 394 (415)
.++++.||+||++.+.+....+ .....+++|+|++++.++|+| +++.. ++.++.|||+++|+.++.||+++++.+.
T Consensus 317 ~~l~~~YG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d-~~~~~--~~~g~~Gel~v~g~~~~~gy~~~~~~~~ 393 (542)
T PRK07786 317 AQILAAFGQTEMSPVTCMLLGEDAIRKLGSVGKVIPTVAARVVD-ENMND--VPVGEVGEIVYRAPTLMSGYWNNPEATA 393 (542)
T ss_pred CeEEeeecccccccceEecCcccccccCCCccccCCCceEEEEC-CCCCC--CcCCCceEEEEEChhhhhhhcCCHHHHH
Confidence 8999999999998765543322 223457899999999999999 76654 4566999999999999999999999999
Q ss_pred hhhcCCceecCceEEEcCCCC
Q 014951 395 EVIVDGWFHTGDIGEWQPMEL 415 (415)
Q Consensus 395 ~~~~~g~~~TGDlg~~d~~G~ 415 (415)
..|.+|||+|||++++|+||+
T Consensus 394 ~~f~~~~~~TGDl~~~~~~g~ 414 (542)
T PRK07786 394 EAFAGGWFHSGDLVRQDEEGY 414 (542)
T ss_pred HHhhCCcccccceEEEcCCce
Confidence 999999999999999999984
No 47
>PRK03640 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=100.00 E-value=4.3e-47 Score=367.86 Aligned_cols=329 Identities=26% Similarity=0.398 Sum_probs=269.3
Q ss_pred CccCCCCCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEcCCChhhhhhcCccCCCC
Q 014951 1 MRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLY 80 (415)
Q Consensus 1 L~~~Gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~ 80 (415)
|.+.|+++||+|+++++|+++++++++||+++|++++|+++.++.+++..+++.++++++|+++.....+.....
T Consensus 44 L~~~g~~~~~~v~i~~~~~~~~~~~~la~~~~G~~~v~i~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~----- 118 (483)
T PRK03640 44 LAALGVKKGDRVALLMKNGMEMILVIHALQQLGAVAVLLNTRLSREELLWQLDDAEVKCLITDDDFEAKLIPGIS----- 118 (483)
T ss_pred HHHcCCCCCCEEEEECCCCHHHHHHHHHHHhCCcEEEecCcCCCHHHHHHHHHhCCCCEEEEcchhhHHHhhhcc-----
Confidence 356799999999999999999999999999999999999999999999999999999999998765443321100
Q ss_pred ccEEEEecCCCchhhHHhhhcCceeecHHHHHhcC-CCCCCCCCCCCCCeEEEEecCCCCCCCceEEeecHHHHHHhhhh
Q 014951 81 LKTIVSFANVSSSQKKEAEELGVSCFSWEEFLQLG-TLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSV 159 (415)
Q Consensus 81 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~~~ 159 (415)
..++++.... ..........++++++++|||||||.||+|.+||.++...+...
T Consensus 119 -------------------------~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~~~~~~~~~ 173 (483)
T PRK03640 119 -------------------------VKFAELMNGPKEEAEIQEEFDLDEVATIMYTSGTTGKPKGVIQTYGNHWWSAVGS 173 (483)
T ss_pred -------------------------ccHHHHhhcccccCCCCCCCCCCCeEEEEeCCCcCCCCcEEEEecHHHHHHHHHH
Confidence 0122222221 11112233467899999999999999999999999998876655
Q ss_pred hhhhhhccccCCCCCEEEEeCChhhHHHHHHHHHhhhcCcEEEEeCC-CHHHHHHHHHhhCCeEEEeCcHHHHHHHHHHH
Q 014951 160 DQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG-DVRYLMEDIQELKPTMFSGVPRVYDRIYTGIS 238 (415)
Q Consensus 160 ~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~vv~~~~-~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~ 238 (415)
...+ .+..+|++++.+|++|.+++..++.++..|+++++.+. ++..+++.++++++|++.++|+++..+.+.+.
T Consensus 174 ~~~~-----~~~~~d~~l~~~p~~~~~g~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~ 248 (483)
T PRK03640 174 ALNL-----GLTEDDCWLAAVPIFHISGLSILMRSVIYGMRVVLVEKFDAEKINKLLQTGGVTIISVVSTMLQRLLERLG 248 (483)
T ss_pred HHhc-----CCCcCcEEEEecCHHHHHHHHHHHHHHhcCCEEEecCCCCHHHHHHHHHHhCCcEEEeHHHHHHHHHhCcC
Confidence 4444 67899999999999999998888888999999999877 99999999999999999999999998864211
Q ss_pred HhhhcCChhhHHHHHHHHHhhhhccccCCCCCCccchhhHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHHHhcCCce
Q 014951 239 NKISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPL 318 (415)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~~G~~~~~~~~~~~~~~~~~~~ 318 (415)
.. ....++|.+++||+++++.+.+.+++ +++++
T Consensus 249 ~~----------------------------------------------~~~~~lr~~~~~g~~~~~~~~~~~~~-~~~~~ 281 (483)
T PRK03640 249 EG----------------------------------------------TYPSSFRCMLLGGGPAPKPLLEQCKE-KGIPV 281 (483)
T ss_pred cc----------------------------------------------ccCCcceEEEEcCCCCCHHHHHHHHH-hCCCe
Confidence 00 00138999999999999999998886 59999
Q ss_pred EEeeccCCCCceeee-ecCCcccccCcccccccCeEEEEeecCCCCCCCCCCCCCCeEEEecCCccccccCCchhhhhhh
Q 014951 319 TQGYGLTESCSGCFT-SLADVFNMIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVI 397 (415)
Q Consensus 319 ~~~yG~tE~~~~~~~-~~~~~~~~~~~~G~~~~g~~~~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gY~~~~~~~~~~~ 397 (415)
++.||+||++..+.. .........+++|+|+++++++|.+ +. .+++.++.|||+++||.++.||+++++.+.+.|
T Consensus 282 ~~~YG~tE~~~~~~~~~~~~~~~~~~~vG~p~~~~~~~i~~-~~---~~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~~ 357 (483)
T PRK03640 282 YQSYGMTETASQIVTLSPEDALTKLGSAGKPLFPCELKIEK-DG---VVVPPFEEGEIVVKGPNVTKGYLNREDATRETF 357 (483)
T ss_pred eeeeccCcccccccccCcccccccCCCcccccCCcEEEEec-CC---CcCCCCCceEEEEECcchhhhhcCCHHHHHHHH
Confidence 999999998764433 2222334458999999999999988 43 355677999999999999999999999999999
Q ss_pred cCCceecCceEEEcCCCC
Q 014951 398 VDGWFHTGDIGEWQPMEL 415 (415)
Q Consensus 398 ~~g~~~TGDlg~~d~~G~ 415 (415)
.+|||+|||++++|+||+
T Consensus 358 ~~~~~~tGDl~~~~~~g~ 375 (483)
T PRK03640 358 QDGWFKTGDIGYLDEEGF 375 (483)
T ss_pred hcCCeeccceEEEcCCCC
Confidence 999999999999999985
No 48
>PRK05620 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=7.9e-47 Score=373.05 Aligned_cols=361 Identities=21% Similarity=0.322 Sum_probs=278.7
Q ss_pred CCCCCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEcCCChhhhhhcCccCCCCccE
Q 014951 4 RGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKT 83 (415)
Q Consensus 4 ~Gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~ 83 (415)
.|+++||+|+++++|+++++++++||+++|+++++++|..+.+++.++++.++++++|++....+.+...... ....+.
T Consensus 59 ~g~~~gd~V~~~~~n~~e~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~~~~~-~~~~~~ 137 (576)
T PRK05620 59 LGITGDQRVGSMMYNCAEHLEVLFAVACMGAVFNPLNKQLMNDQIVHIINHAEDEVIVADPRLAEQLGEILKE-CPCVRA 137 (576)
T ss_pred cCCCCCCEEEEEeCCCHHHHHHHHHHHhcCCEEeecccccCHHHHHHHHhccCCcEEEEChhhHHHHHHHHhh-CccccE
Confidence 6999999999999999999999999999999999999999999999999999999999998877666544333 234455
Q ss_pred EEEecCCCchhhHHhhhcCceeecHHHHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEeecHHHHHHhhhhhhhh
Q 014951 84 IVSFANVSSSQKKEAEELGVSCFSWEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMF 163 (415)
Q Consensus 84 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~~~~~~~ 163 (415)
++..+...................+.++..............++++++++|||||||.||+|.++|+++..........
T Consensus 138 i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~l~~~~~~~~~~- 216 (576)
T PRK05620 138 VVFIGPSDADSAAAHMPEGIKVYSYEALLDGRSTVYDWPELDETTAAAICYSTGTTGAPKGVVYSHRSLYLQSLSLRTT- 216 (576)
T ss_pred EEEecCcccccchhccccccccccHHHHhhcCCCcCCCCCCCccceeEEEECCCCCCCCceEEEEcHHHHHHHHHhhhh-
Confidence 5555432111000001112234567777654322222344567899999999999999999999999986554432111
Q ss_pred hhccccCCCCCEEEEeCChhhHHHHHHHHHhhhcCcEEEEeCC--CHHHHHHHHHhhCCeEEEeCcHHHHHHHHHHHHhh
Q 014951 164 VVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKI 241 (415)
Q Consensus 164 ~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~vv~~~~--~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~ 241 (415)
....+..++++++.+|++|.+++...+.++..|+++++... ++..+++.++++++|.++++|+++..++.......
T Consensus 217 --~~~~~~~~~~~l~~~pl~h~~g~~~~~~~l~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~ 294 (576)
T PRK05620 217 --DSLAVTHGESFLCCVPIYHVLSWGVPLAAFMSGTPLVFPGPDLSAPTLAKIIATAMPRVAHGVPTLWIQLMVHYLKNP 294 (576)
T ss_pred --hhcCCCCCCeEEEeCChHHhhhhHHHHHHHhcCceEEecCCCCCHHHHHHHHHHhcCceeeecCHHHHHHHHHhhccC
Confidence 11256789999999999999998878888999999988753 89999999999999999999999988764221000
Q ss_pred hcCChhhHHHHHHHHHhhhhccccCCCCCCccchhhHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHHHhcCCceEEe
Q 014951 242 SSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQG 321 (415)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~~G~~~~~~~~~~~~~~~~~~~~~~ 321 (415)
.+ ..++|.+++||+++++++.+.+.+.+++++++.
T Consensus 295 -------------------------------------~~--------~~~l~~~~~gG~~~~~~~~~~~~~~~~~~~~~~ 329 (576)
T PRK05620 295 -------------------------------------PE--------RMSLQEIYVGGSAVPPILIKAWEERYGVDVVHV 329 (576)
T ss_pred -------------------------------------cc--------cCceeEEEEcCCCCCHHHHHHHHHHhCCceeee
Confidence 00 026999999999999999999998899999999
Q ss_pred eccCCCCceeeeecCCcc-------cccCcccccccCeEEEEeecCCCCCCCCCCCCCCeEEEecCCccccccCCchhh-
Q 014951 322 YGLTESCSGCFTSLADVF-------NMIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLT- 393 (415)
Q Consensus 322 yG~tE~~~~~~~~~~~~~-------~~~~~~G~~~~g~~~~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gY~~~~~~~- 393 (415)
||+||++..+....+... ....++|++.++++++|++ + +...+...++.|||+++|+.++.|||++++.+
T Consensus 330 YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~~-~-g~~~~~~~~~~Gel~v~g~~~~~gY~~~~~~t~ 407 (576)
T PRK05620 330 WGMTETSPVGTVARPPSGVSGEARWAYRVSQGRFPASLEYRIVN-D-GQVMESTDRNEGEIQVRGNWVTASYYHSPTEEG 407 (576)
T ss_pred ccccccccceeeeccCCccccccccccccccCCcCCceeEEEec-C-CccccCCCCCceEEEEEcCcccccccCCccccc
Confidence 999999876654432210 1124789999999999998 5 55455455688999999999999999999887
Q ss_pred ---------------hhhh-cCCceecCceEEEcCCCC
Q 014951 394 ---------------EEVI-VDGWFHTGDIGEWQPMEL 415 (415)
Q Consensus 394 ---------------~~~~-~~g~~~TGDlg~~d~~G~ 415 (415)
..+| .+|||+|||+|++|+||+
T Consensus 408 ~~~~~~f~~~~~~~~~~~~~~~g~~~TGD~~~~~~dg~ 445 (576)
T PRK05620 408 GGAASTFRGEDVEDANDRFTADGWLRTGDVGSVTRDGF 445 (576)
T ss_pred cccccccccccchhhhcccccCCcEecCceEEEcCCce
Confidence 2234 478999999999999984
No 49
>PRK06839 acyl-CoA synthetase; Validated
Probab=100.00 E-value=4.3e-47 Score=369.14 Aligned_cols=336 Identities=26% Similarity=0.360 Sum_probs=270.4
Q ss_pred CCCCCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEcCCChhhhhhcCccCCCCccE
Q 014951 4 RGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKT 83 (415)
Q Consensus 4 ~Gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~ 83 (415)
.|+++||+|+++++|+++++++++||+++|++++|+++.++.+++..+++.+++++++++++..+.+...... .....
T Consensus 48 ~g~~~~~~V~i~~~~~~~~~~~~la~~~~G~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~--~~~~~ 125 (496)
T PRK06839 48 LNVKKGERIAILSQNSLEYIVLLFAIAKVECIAVPLNIRLTENELIFQLKDSGTTVLFVEKTFQNMALSMQKV--SYVQR 125 (496)
T ss_pred cCCCCCCEEEEECCCCHHHHHHHHHHHhcCcEEEecCcccCHHHHHHHHHhcCceEEEEcHHHHHHHHHhhhc--cCcce
Confidence 6999999999999999999999999999999999999999999999999999999999998766554432221 11122
Q ss_pred EEEecCCCchhhHHhhhcCceeecHHHHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEeecHHHHHHhhhhhhhh
Q 014951 84 IVSFANVSSSQKKEAEELGVSCFSWEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMF 163 (415)
Q Consensus 84 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~~~~~~~ 163 (415)
++.+. ++++..... .....+..++++++++|||||||.||+|.++|.++..........+
T Consensus 126 ~~~~~------------------~~~~~~~~~--~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~ 185 (496)
T PRK06839 126 VISIT------------------SLKEIEDRK--IDNFVEKNESASFIICYTSGTTGKPKGAVLTQENMFWNALNNTFAI 185 (496)
T ss_pred EEEec------------------chHhhhccC--CCCCCCCCCCCcEEEEeCCCCCCCCcEEEEEhHHHHHHHHHHHHHc
Confidence 22222 122222211 1122345568999999999999999999999999876655443333
Q ss_pred hhccccCCCCCEEEEeCChhhHHHHHH-HHHhhhcCcEEEEeCC-CHHHHHHHHHhhCCeEEEeCcHHHHHHHHHHHHhh
Q 014951 164 VVTGKVCSEEDTYFSFLPLAHIYDQII-ETHCIHKGCSIGFWRG-DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKI 241 (415)
Q Consensus 164 ~~~~~~~~~~d~~l~~~p~~~~~~~~~-~~~~l~~G~~vv~~~~-~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~ 241 (415)
.+..+|++++.+|++|.+++.. .+.++..|+++++.+. ++.++++.++++++|++.++|++++.+++...
T Consensus 186 -----~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~--- 257 (496)
T PRK06839 186 -----DLTMHDRSIVLLPLFHIGGIGLFAFPTLFAGGVIIVPRKFEPTKALSMIEKHKVTVVMGVPTIHQALINCSK--- 257 (496)
T ss_pred -----CCCCCCeEEEeeCCcchhhHHHHHHHHHhcCcEEEEccCCCHHHHHHHHHhhCCeEEEehHHHHHHHHhCcc---
Confidence 6678999999999999998875 5678999999988766 99999999999999999999999998865211
Q ss_pred hcCChhhHHHHHHHHHhhhhccccCCCCCCccchhhHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHHHhcCCceEEe
Q 014951 242 SSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQG 321 (415)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~~G~~~~~~~~~~~~~~~~~~~~~~ 321 (415)
....+ .+++|.+++||+++++++.+.+++. +.++.+.
T Consensus 258 ----------------------------------~~~~~--------~~~lr~~~~gG~~~~~~~~~~~~~~-g~~~~~~ 294 (496)
T PRK06839 258 ----------------------------------FETTN--------LQSVRWFYNGGAPCPEELMREFIDR-GFLFGQG 294 (496)
T ss_pred ----------------------------------cccCC--------CcccceEEECCCCCCHHHHHHHHHh-CCeeEee
Confidence 00001 1379999999999999999999875 8999999
Q ss_pred eccCCCCceeeeecCC-cccccCcccccccCeEEEEeecCCCCCCCCCCCCCCeEEEecCCccccccCCchhhhhhhcCC
Q 014951 322 YGLTESCSGCFTSLAD-VFNMIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVIVDG 400 (415)
Q Consensus 322 yG~tE~~~~~~~~~~~-~~~~~~~~G~~~~g~~~~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gY~~~~~~~~~~~~~g 400 (415)
||+||++..++..... .....+++|+|+++++++|+| +++.. ++.|+.|||+|+|+.++.||+++++.+...+.+|
T Consensus 295 YG~tE~~~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d-~~~~~--~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g 371 (496)
T PRK06839 295 FGMTETSPTVFMLSEEDARRKVGSIGKPVLFCDYELID-ENKNK--VEVGEVGELLIRGPNVMKEYWNRPDATEETIQDG 371 (496)
T ss_pred ccCCCCCcceEecccccccccCCCCcccCCCceEEEEC-CCcCC--CCCCCceEEEEECCCcchhhcCChHHHHHHHcCC
Confidence 9999998755433222 223458999999999999999 77764 5677999999999999999999999999888999
Q ss_pred ceecCceEEEcCCCC
Q 014951 401 WFHTGDIGEWQPMEL 415 (415)
Q Consensus 401 ~~~TGDlg~~d~~G~ 415 (415)
||+|||+|++|+||+
T Consensus 372 ~~~TGDl~~~~~~g~ 386 (496)
T PRK06839 372 WLCTGDLARVDEDGF 386 (496)
T ss_pred CeeecceEEEcCCCc
Confidence 999999999999985
No 50
>TIGR03208 cyc_hxne_CoA_lg cyclohexanecarboxylate-CoA ligase. Members of this protein family are cyclohexanecarboxylate-CoA ligase. This enzyme prepares the aliphatic ring compound, cyclohexanecarboxylate, for dehydrogenation and then degradation by a pathway also used in benzoyl-CoA degradation in Rhodopseudomonas palustris.
Probab=100.00 E-value=1.1e-46 Score=369.42 Aligned_cols=347 Identities=22% Similarity=0.266 Sum_probs=272.5
Q ss_pred CccCCCCCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEcCCChh-----hhhhcCc
Q 014951 1 MRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIP-----SILSCLP 75 (415)
Q Consensus 1 L~~~Gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~-----~~~~~~~ 75 (415)
|++.|+++||+|+++++|+++++++++||+++|++++|++|..+.+++.++++.++++++|+++.... .......
T Consensus 70 L~~~g~~~g~~V~i~~~~~~~~~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~ 149 (538)
T TIGR03208 70 LARLGVGRGDVVSFQLPNRWEFTALYLACARIGAVLNPLMPIFRERELSFMLNHADSKVFVVPSVFRGFDHAAMARELQS 149 (538)
T ss_pred HHHcCCCCCCEEEEECCCCHHHHHHHHHHHhcCEEEeccCcccCHHHHHHHHHhcCCeEEEEccccccccHHHHHHHHhc
Confidence 45679999999999999999999999999999999999999999999999999999999999876421 1111111
Q ss_pred cCCCCccEEEEecCCCchhhHHhhhcCceeecHHHHHhcCC----C----CCCCCCCCCCCeEEEEecCCCCCCCceEEe
Q 014951 76 RCCLYLKTIVSFANVSSSQKKEAEELGVSCFSWEEFLQLGT----L----DCELPPKKKTNISTIMYTSGTTGEPKGVVL 147 (415)
Q Consensus 76 ~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~----~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~ 147 (415)
..+..+.++..+.... ..+++++.... . ........++++++++|||||||.||+|++
T Consensus 150 -~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~ 215 (538)
T TIGR03208 150 -KLPALRQVVVIDGDGD-------------DSFDRVLMTPERDDTPDAAAILAGPRPSPDDVTQLIYTSGTTGEPKGVMH 215 (538)
T ss_pred -cCCcceEEEEecCCCC-------------cCHHHHhhccccccccccccccccCCCCCCCeEEEEECCCCCCCCcEEEe
Confidence 1233345555543211 12222221110 0 011123567899999999999999999999
Q ss_pred ecHHHHHHhhhhhhhhhhccccCCCCCEEEEeCChhhHHHHHH-HHHhhhcCcEEEEeCC-CHHHHHHHHHhhCCeEEEe
Q 014951 148 TNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQII-ETHCIHKGCSIGFWRG-DVRYLMEDIQELKPTMFSG 225 (415)
Q Consensus 148 th~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~-~~~~l~~G~~vv~~~~-~~~~~~~~i~~~~~t~~~~ 225 (415)
+|.++...+......+ .+..+|++++.+|++|..++.. ++.+++.|+++++.+. ++..+++.++++++|++.+
T Consensus 216 s~~~~~~~~~~~~~~~-----~~~~~d~~l~~~pl~h~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~l~~~~vt~~~~ 290 (538)
T TIGR03208 216 TANTLFSNIHPYAERL-----ELGGGDVILMASPMAHQTGFMYGLMMPLILNATAVLQDIWNPARAAELIRETGVTFTMA 290 (538)
T ss_pred ehHHHHHHHHHHHhhc-----CCCCCCeEEEeCCchhHHHHHHHHHHHHHcCCEEEecCccCHHHHHHHHHHhCCeEEec
Confidence 9999998887766555 6778999999999999988765 6778999999988776 9999999999999999999
Q ss_pred CcHHHHHHHHHHHHhhhcCChhhHHHHHHHHHhhhhccccCCCCCCccchhhHHHHHHHHHHhCCceeEEEEecCCCCHH
Q 014951 226 VPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIH 305 (415)
Q Consensus 226 ~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~~G~~~~~~ 305 (415)
+|.++..+...+.... . ..+++|.+++||++++++
T Consensus 291 ~p~~~~~l~~~~~~~~-------------------------------------~--------~~~~l~~~~~gG~~~~~~ 325 (538)
T TIGR03208 291 STPFLTDLCRAVKESG-------------------------------------A--------PVPSLFTFLCAGAPIPGI 325 (538)
T ss_pred CHHHHHHHHhchhccC-------------------------------------C--------CCCcceEEEEcCCCCCHH
Confidence 9999988754221100 0 013799999999999999
Q ss_pred HHHHHHHhcCCceEEeeccCCCCceeeeecCCcc-cccCcccccccCeEEEEeecCCCCCCCCCCCCCCeEEEecCCccc
Q 014951 306 VEEFLRVTSGAPLTQGYGLTESCSGCFTSLADVF-NMIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFS 384 (415)
Q Consensus 306 ~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~~~~-~~~~~~G~~~~g~~~~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~ 384 (415)
+.+++.+.++.++++.||+||++.+.+....... ....++|+|++|++++|++ +++.. ++.|+.|||+++|+.++.
T Consensus 326 ~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~G~~~~g~~v~i~~-~~~~~--~~~g~~Gel~v~g~~~~~ 402 (538)
T TIGR03208 326 LVERAWELLGALIVSAWGMTENGAVTVTEPDDALEKASTTDGRPLPGVEVKVID-ANGAK--LSQGETGRLLVRGCSNFG 402 (538)
T ss_pred HHHHHHHHcCCeEEeeeccCcCCCccccCcccchhhccCcccccCCCCEEEEEC-CCCCC--CcCCCCcEEEEecCcccc
Confidence 9999988899999999999999876654433222 2236789999999999999 66654 456799999999999999
Q ss_pred cccCCchhhhhhhcCCceecCceEEEcCCCC
Q 014951 385 GYYKRPDLTEEVIVDGWFHTGDIGEWQPMEL 415 (415)
Q Consensus 385 gY~~~~~~~~~~~~~g~~~TGDlg~~d~~G~ 415 (415)
||+++++.+.. ..+|||+|||+|++|+||+
T Consensus 403 gy~~~~~~~~~-~~~~~~~TGD~~~~~~~g~ 432 (538)
T TIGR03208 403 GYLKRPHLNST-DAEGWFDTGDLAFQDAEGY 432 (538)
T ss_pred cccCCcccccc-cCCCceeccceEEECCCCc
Confidence 99999987653 3689999999999999985
No 51
>PRK08316 acyl-CoA synthetase; Validated
Probab=100.00 E-value=7.4e-47 Score=369.96 Aligned_cols=354 Identities=23% Similarity=0.346 Sum_probs=281.3
Q ss_pred CccCCCCCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEcCCChhhhhhcCccCCCC
Q 014951 1 MRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLY 80 (415)
Q Consensus 1 L~~~Gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~ 80 (415)
|.+.|+++||+|+++++|+++++++++||+++|++++|+++.++.+++..+++.++++++|++.+....+........
T Consensus 53 L~~~gi~~~~~V~l~~~~~~~~~~~~~a~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~-- 130 (523)
T PRK08316 53 LLDLGLKKGDRVAALGHNSDAYALLWLACARAGAVHVPVNFMLTGEELAYILDHSGARAFLVDPALAPTAEAALALLP-- 130 (523)
T ss_pred HHHcCCCCCCEEEEECCCCHHHHHHHHHHHhcCcEEEecccccCHHHHHHHHHhCCCCEEEEccchHHHHHHHhhhcC--
Confidence 346799999999999999999999999999999999999999999999999999999999999887766654332211
Q ss_pred ccEEEEecCCCchhhHHhhhcCceeecHHHHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEeecHHHHHHhhhhh
Q 014951 81 LKTIVSFANVSSSQKKEAEELGVSCFSWEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVD 160 (415)
Q Consensus 81 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~~~~ 160 (415)
...+........ ......+..+.++...............+++++++|||||||.||+|.+||.++........
T Consensus 131 ~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~ 204 (523)
T PRK08316 131 VDTLILSLVLGG------REAPGGWLDFADWAEAGSVAEPDVELADDDLAQILYTSGTESLPKGAMLTHRALIAEYVSCI 204 (523)
T ss_pred ccceeeeecccc------cccccchhhHHHHHhcCCCccCccCCCCCCeEEEEeCCCCCCCCcEEEEecHHHHHHHHHHH
Confidence 111111110000 00112244555555433222234456778999999999999999999999999998877655
Q ss_pred hhhhhccccCCCCCEEEEeCChhhHHHHHH-HHHhhhcCcEEEEeCC-CHHHHHHHHHhhCCeEEEeCcHHHHHHHHHHH
Q 014951 161 QMFVVTGKVCSEEDTYFSFLPLAHIYDQII-ETHCIHKGCSIGFWRG-DVRYLMEDIQELKPTMFSGVPRVYDRIYTGIS 238 (415)
Q Consensus 161 ~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~-~~~~l~~G~~vv~~~~-~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~ 238 (415)
..+ .+++++++++.+|++|..++.. ++.+++.|+++++.+. ++..+++.++++++|++.++|.++..+.+...
T Consensus 205 ~~~-----~~~~~~~~~~~~p~~h~~g~~~~~~~~~~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~ 279 (523)
T PRK08316 205 VAG-----DMSADDIPLHALPLYHCAQLDVFLGPYLYVGATNVILDAPDPELILRTIEAERITSFFAPPTVWISLLRHPD 279 (523)
T ss_pred HHh-----CCCCCceEEEccCCchhhhHHHHHHHHHhcCceEEEecCCCHHHHHHHHHHhCCeEEEeCHHHHHHHHcCcc
Confidence 554 6788999999999999998875 5567889999999865 99999999999999999999999988754110
Q ss_pred HhhhcCChhhHHHHHHHHHhhhhccccCCCCCCccchhhHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHHHhc-CCc
Q 014951 239 NKISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTS-GAP 317 (415)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~~G~~~~~~~~~~~~~~~-~~~ 317 (415)
....++ +++|.+++||++++.++.+.+++.+ +.+
T Consensus 280 -------------------------------------~~~~~~--------~~l~~~~~gg~~~~~~~~~~~~~~~~~~~ 314 (523)
T PRK08316 280 -------------------------------------FDTRDL--------SSLRKGYYGASIMPVEVLKELRERLPGLR 314 (523)
T ss_pred -------------------------------------cccCCc--------ccceEEEEcCCcCCHHHHHHHHHHcCCCc
Confidence 000111 3799999999999999999999887 689
Q ss_pred eEEeeccCCCCceeeeecCCc-ccccCcccccccCeEEEEeecCCCCCCCCCCCCCCeEEEecCCccccccCCchhhhhh
Q 014951 318 LTQGYGLTESCSGCFTSLADV-FNMIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEV 396 (415)
Q Consensus 318 ~~~~yG~tE~~~~~~~~~~~~-~~~~~~~G~~~~g~~~~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gY~~~~~~~~~~ 396 (415)
+++.||+||++.+++...... ....+++|+|+++++++|+| +++.. ++.|+.|||+++|+.++.||+++++.+.+.
T Consensus 315 ~~~~YG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~~-~~~~~--~~~g~~Gei~v~~~~~~~~y~~~~~~~~~~ 391 (523)
T PRK08316 315 FYNCYGQTEIAPLATVLGPEEHLRRPGSAGRPVLNVETRVVD-DDGND--VAPGEVGEIVHRSPQLMLGYWDDPEKTAEA 391 (523)
T ss_pred eeeeecccccCccccccCccccccccCCcccCCCCcEEEEEc-CCCCC--CCCCCcceEEEECCchhhhhcCCHHHHHHH
Confidence 999999999988765543322 23358899999999999999 66654 445699999999999999999999999999
Q ss_pred hcCCceecCceEEEcCCCC
Q 014951 397 IVDGWFHTGDIGEWQPMEL 415 (415)
Q Consensus 397 ~~~g~~~TGDlg~~d~~G~ 415 (415)
|.+|||+|||+|++|+||+
T Consensus 392 ~~~~~~~TGDl~~~~~~g~ 410 (523)
T PRK08316 392 FRGGWFHSGDLGVMDEEGY 410 (523)
T ss_pred hhCCCeeccceEEEcCCce
Confidence 9999999999999999985
No 52
>COG1021 EntE Peptide arylation enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=1.9e-48 Score=336.27 Aligned_cols=349 Identities=19% Similarity=0.263 Sum_probs=293.8
Q ss_pred CccCCCCCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEcCCCh-----hhhhhcCc
Q 014951 1 MRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKI-----PSILSCLP 75 (415)
Q Consensus 1 L~~~Gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~-----~~~~~~~~ 75 (415)
|++.||++||+|.+.++|..++++++||++++|+.+|.--|+....+|.++.+.++++.+|.+.... +...+.+.
T Consensus 70 l~~lGi~~Gd~vlvQLpN~~ef~~~~FALlrlGv~PVlALpsHr~~Ei~~f~~~~e~~~~i~~~~~~gFd~~~~ar~~~a 149 (542)
T COG1021 70 LRRLGIKPGDTVLVQLPNVAEFYITFFALLRLGVAPVLALPSHRASELGAFASQIEAALLIVARQHSGFDYRPFARELVA 149 (542)
T ss_pred HHhcCCCCCCEEEEECCchHHHHHHHHHHHHcCcchhhccchhhHHHHHHHHHhhcchheeechhhcccCcHHHHHHHHh
Confidence 4678999999999999999999999999999999999999999999999999999999999986432 22222232
Q ss_pred cCCCCccEEEEecCCCchhhHHhhhcCceeecHHHHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEeecHHHHHH
Q 014951 76 RCCLYLKTIVSFANVSSSQKKEAEELGVSCFSWEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAE 155 (415)
Q Consensus 76 ~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~ 155 (415)
..+.++.+++.++.... ...+..+........+.++.++++++++..+.||||.||-|+.||.....+
T Consensus 150 -~~~tlr~v~v~ge~~~~-----------~~~~~~~~~~a~~~~~a~~~~~~~vA~fqLSGGTTGtPKLIPRtH~DY~Ys 217 (542)
T COG1021 150 -KHPTLRHVIVAGEAEHP-----------SVLEAALCHPAGLFTPAPPADAGEVAFFQLSGGTTGTPKLIPRTHNDYYYS 217 (542)
T ss_pred -hCCcceEEEEccCCCCc-----------chhhhhhhCccccCCcCCCCCCCceEEEEecCCCCCCCccccccccceeee
Confidence 33778888888554211 112222222224444567788899999999999999999999999999999
Q ss_pred hhhhhhhhhhccccCCCCCEEEEeCChhhHHHHHH--HHHhhhcCcEEEEeCC-CHHHHHHHHHhhCCeEEEeCcHHHHH
Q 014951 156 VLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQII--ETHCIHKGCSIGFWRG-DVRYLMEDIQELKPTMFSGVPRVYDR 232 (415)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~--~~~~l~~G~~vv~~~~-~~~~~~~~i~~~~~t~~~~~P~~~~~ 232 (415)
+....+.+ .+++.+++++.+|..|.+.+.. .+..++.|+++|+.+. +++..+.+|++++||+...+|.+...
T Consensus 218 v~aSaEiC-----~~~~~tvyL~~LP~AHNfplssPG~LGv~~agG~VVla~~psp~~~F~lIerh~Vt~tALVPpla~L 292 (542)
T COG1021 218 VRASAEIC-----GFDQQTVYLCALPAAHNFPLSSPGALGVFLAGGTVVLAPDPSPELCFPLIERHGVTVTALVPPLASL 292 (542)
T ss_pred eeehhhhh-----CcCccceEEEecccccCCCCCCcchhheeeeccEEEECCCCCHHHHHHHHHHhccceEEeccHHHHH
Confidence 99988888 8999999999999999999875 7888999999999987 99999999999999999999999888
Q ss_pred HHHHHHHhhhcCChhhHHHHHHHHHhhhhccccCCCCCCccchhhHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHHH
Q 014951 233 IYTGISNKISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRV 312 (415)
Q Consensus 233 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~~G~~~~~~~~~~~~~ 312 (415)
+++..+ ++..++ +|||.+.+||+.+++++.+.+..
T Consensus 293 Wlqa~e-------------------------------------~~~~~L--------sSLrllQVGGarl~~~~Arrv~~ 327 (542)
T COG1021 293 WLQAAE-------------------------------------WERADL--------SSLRLLQVGGARLSATLARRVPA 327 (542)
T ss_pred HHHhhh-------------------------------------cccCCc--------hheeEEeecCcccCHHHHhhchh
Confidence 766322 222233 48999999999999999999999
Q ss_pred hcCCceEEeeccCCCCceeeeecCCcccc-cCcccccc-cCeEEEEeecCCCCCCCCCCCCCCeEEEecCCccccccCCc
Q 014951 313 TSGAPLTQGYGLTESCSGCFTSLADVFNM-IGTVGVPM-TTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRP 390 (415)
Q Consensus 313 ~~~~~~~~~yG~tE~~~~~~~~~~~~~~~-~~~~G~~~-~g~~~~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gY~~~~ 390 (415)
.+|+.+-+.|||.| |.+++...++..+. ..+.|+|+ |.-+++|+| .+|+ ++++||.|+|.++||..++|||+.|
T Consensus 328 ~lgC~LQQVFGMAE-GLvnyTRLDDp~E~i~~TQGrPlsP~DEvrvvD-~dg~--pv~pGE~G~LltRGPYTirGYyrap 403 (542)
T COG1021 328 VLGCQLQQVFGMAE-GLVNYTRLDDPPEIIIHTQGRPLSPDDEVRVVD-ADGN--PVAPGEVGELLTRGPYTIRGYYRAP 403 (542)
T ss_pred hhCchHHHHhhhhh-hhhcccccCCchHheeecCCCcCCCcceeEEec-CCCC--CCCCCCcceeeecCCeeeeeeccCc
Confidence 99999999999999 55555555555433 46789997 788999999 7775 5567799999999999999999999
Q ss_pred hhhhhhh-cCCceecCceEEEcCCCC
Q 014951 391 DLTEEVI-VDGWFHTGDIGEWQPMEL 415 (415)
Q Consensus 391 ~~~~~~~-~~g~~~TGDlg~~d~~G~ 415 (415)
+.+.++| .+|||+|||++++|+|||
T Consensus 404 ~HNa~aF~a~GFYrsGD~V~~~~dGy 429 (542)
T COG1021 404 EHNARAFDADGFYRSGDLVRRDPDGY 429 (542)
T ss_pred hhhhhccCcCCceecCceeEecCCce
Confidence 9999999 899999999999999997
No 53
>PRK07514 malonyl-CoA synthase; Validated
Probab=100.00 E-value=1.8e-46 Score=365.49 Aligned_cols=345 Identities=24% Similarity=0.408 Sum_probs=273.2
Q ss_pred CccCCCCCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEcCCChhhhhhcCccCCCC
Q 014951 1 MRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLY 80 (415)
Q Consensus 1 L~~~Gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~ 80 (415)
|++.|+++||+|+++++|+++++++++||+++|++++|+++..+.+++..+++.++++++|+++.....+...... ..
T Consensus 45 L~~~g~~~gd~v~i~~~~~~e~~v~~la~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~--~~ 122 (504)
T PRK07514 45 LVALGVKPGDRVAVQVEKSPEALALYLATLRAGAVFLPLNTAYTLAELDYFIGDAEPALVVCDPANFAWLSKIAAA--AG 122 (504)
T ss_pred HHHcCCCCCCEEEEECCCCHHHHHHHHHHHHcCcEEEECCCCCCHHHHHHHHHhCCCcEEEEccchhHHHHHhhhc--cC
Confidence 4567999999999999999999999999999999999999999999999999999999999998776655443221 11
Q ss_pred ccEEEEecCCCchhhHHhhhcCceeecHHHHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEeecHHHHHHhhhhh
Q 014951 81 LKTIVSFANVSSSQKKEAEELGVSCFSWEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVD 160 (415)
Q Consensus 81 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~~~~ 160 (415)
...++.++.... ..+.+...............++++++++|||||||.||+|.+||.++...+....
T Consensus 123 ~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~ 189 (504)
T PRK07514 123 APHVETLDADGT-------------GSLLEAAAAAPDDFETVPRGADDLAAILYTSGTTGRSKGAMLSHGNLLSNALTLV 189 (504)
T ss_pred CceEEEecCCCc-------------ccHHHhhhhcCcccCcccCCCCCeEEEEECCCCCCCCcEEEEecHHHHHHHHHHH
Confidence 222333332211 0111111111111222345678999999999999999999999999998887665
Q ss_pred hhhhhccccCCCCCEEEEeCChhhHHHHHH-HHHhhhcCcEEEEeCC-CHHHHHHHHHhhCCeEEEeCcHHHHHHHHHHH
Q 014951 161 QMFVVTGKVCSEEDTYFSFLPLAHIYDQII-ETHCIHKGCSIGFWRG-DVRYLMEDIQELKPTMFSGVPRVYDRIYTGIS 238 (415)
Q Consensus 161 ~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~-~~~~l~~G~~vv~~~~-~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~ 238 (415)
..+ .+..+|++++.+|++|..++.. .+.+++.|+++++.+. ++..+++.+. ++|++.++|.++..++...
T Consensus 190 ~~~-----~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~--~~t~~~~~P~~~~~l~~~~- 261 (504)
T PRK07514 190 DYW-----RFTPDDVLIHALPIFHTHGLFVATNVALLAGASMIFLPKFDPDAVLALMP--RATVMMGVPTFYTRLLQEP- 261 (504)
T ss_pred HHh-----CCCCccEEEEecchHHHHHHHHHHHHHHhcCcEEEECCCCCHHHHHHHHH--hheeeecHHHHHHHHHcCC-
Confidence 554 6778999999999999999875 6778999999999877 9999999994 7999999999998875410
Q ss_pred HhhhcCChhhHHHHHHHHHhhhhccccCCCCCCccchhhHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHHHhcCCce
Q 014951 239 NKISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPL 318 (415)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~~G~~~~~~~~~~~~~~~~~~~ 318 (415)
......+ +++|.+++||+++++++.+++.+.++.++
T Consensus 262 ------------------------------------~~~~~~~--------~~lr~~~~gg~~~~~~~~~~~~~~~~~~~ 297 (504)
T PRK07514 262 ------------------------------------RLTREAA--------AHMRLFISGSAPLLAETHREFQERTGHAI 297 (504)
T ss_pred ------------------------------------CCCcccc--------cceeeEEecCCCCCHHHHHHHHHHhCCcc
Confidence 0011111 37999999999999999999999999999
Q ss_pred EEeeccCCCCceeeeecCCcccccCcccccccCeEEEEeecCCCCCCCCCCCCCCeEEEecCCccccccCCchhhhhhh-
Q 014951 319 TQGYGLTESCSGCFTSLADVFNMIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVI- 397 (415)
Q Consensus 319 ~~~yG~tE~~~~~~~~~~~~~~~~~~~G~~~~g~~~~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gY~~~~~~~~~~~- 397 (415)
++.||+||++......... ....+++|.|+++++++|+| ++++ .+++.|+.|||+++|+.++.||+++++.+.+.|
T Consensus 298 ~~~YG~tE~~~~~~~~~~~-~~~~~~~G~~~~~~~v~i~d-~~~~-~~~~~g~~Gel~i~~~~~~~gy~~~~~~~~~~~~ 374 (504)
T PRK07514 298 LERYGMTETNMNTSNPYDG-ERRAGTVGFPLPGVSLRVTD-PETG-AELPPGEIGMIEVKGPNVFKGYWRMPEKTAEEFR 374 (504)
T ss_pred eeecccccccccccCCccc-cccCcccccCCCCcEEEEEE-CCCC-CCCCCCCceEEEEecCCccccccCCchhhhhhcc
Confidence 9999999987654432222 22347899999999999999 4443 455677999999999999999999999999888
Q ss_pred cCCceecCceEEEcCCCC
Q 014951 398 VDGWFHTGDIGEWQPMEL 415 (415)
Q Consensus 398 ~~g~~~TGDlg~~d~~G~ 415 (415)
.+|||+|||+|++|++|+
T Consensus 375 ~~~~~~TGDl~~~~~~g~ 392 (504)
T PRK07514 375 ADGFFITGDLGKIDERGY 392 (504)
T ss_pred cCCCeeecceEEEcCCcc
Confidence 589999999999999884
No 54
>PLN02330 4-coumarate--CoA ligase-like 1
Probab=100.00 E-value=1.7e-46 Score=368.53 Aligned_cols=350 Identities=22% Similarity=0.350 Sum_probs=270.0
Q ss_pred CccCCCCCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEcCCChhhhhhcCccCCCC
Q 014951 1 MRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLY 80 (415)
Q Consensus 1 L~~~Gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~ 80 (415)
|.+.|+++||+|+++++|+++++++++||+++|++++|+++..+.+++.++++.++++++|+++.....+....
T Consensus 72 L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~~~------ 145 (546)
T PLN02330 72 LRSLGLRKGQVVVVVLPNVAEYGIVALGIMAAGGVFSGANPTALESEIKKQAEAAGAKLIVTNDTNYGKVKGLG------ 145 (546)
T ss_pred HHHhCCCCCCEEEEECCCchHHHHHHHHHHHhCcEeccCCccCCHHHHHHHHHhcCCeEEEEccchhhhHhhcC------
Confidence 45679999999999999999999999999999999999999999999999999999999999988766554321
Q ss_pred ccEEEEecCCCchhhHHhhhcCceeecHHHHHhcCCC---CCCCCCCCCCCeEEEEecCCCCCCCceEEeecHHHHHHhh
Q 014951 81 LKTIVSFANVSSSQKKEAEELGVSCFSWEEFLQLGTL---DCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVL 157 (415)
Q Consensus 81 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~ 157 (415)
. .++.++... ......|.+++..... ........++++++++|||||||.||+|+++|.++..++.
T Consensus 146 ~-~~i~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~il~TSGTTG~PKgv~~s~~~l~~~~~ 214 (546)
T PLN02330 146 L-PVIVLGEEK----------IEGAVNWKELLEAADRAGDTSDNEEILQTDLCALPFSSGTTGISKGVMLTHRNLVANLC 214 (546)
T ss_pred C-cEEEecCCC----------CCCcccHHHHHhhccccCcccccccCCcccEEEEEeCCCCcCCCcEEEEehHHHHHHHH
Confidence 1 233333211 0112345555533211 1122334578999999999999999999999999987654
Q ss_pred hhhhhhhhccccCCCCCEEEEeCChhhHHHHHH-HHHhhhcCcEEEEeCC-CHHHHHHHHHhhCCeEEEeCcHHHHHHHH
Q 014951 158 SVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQII-ETHCIHKGCSIGFWRG-DVRYLMEDIQELKPTMFSGVPRVYDRIYT 235 (415)
Q Consensus 158 ~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~-~~~~l~~G~~vv~~~~-~~~~~~~~i~~~~~t~~~~~P~~~~~l~~ 235 (415)
.. .+... ......++++.++|++|.+++.. ++.++..|+++++.+. ++..+++.++++++|++.++|+++..+++
T Consensus 215 ~~--~~~~~-~~~~~~~~~~~~~p~~h~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~ 291 (546)
T PLN02330 215 SS--LFSVG-PEMIGQVVTLGLIPFFHIYGITGICCATLRNKGKVVVMSRFELRTFLNALITQEVSFAPIVPPIILNLVK 291 (546)
T ss_pred HH--hhccC-ccccCceEEEEecChHHHHHHHHHHHHHhhcCCEEEEecccCHHHHHHHHHHcCCeeeecCCHHHHHHHh
Confidence 32 11111 12234568999999999998874 6778999999988876 99999999999999999999999988754
Q ss_pred HHHHhhhcCChhhHHHHHHHHHhhhhccccCCCCCCccchhhHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHHHhc-
Q 014951 236 GISNKISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTS- 314 (415)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~~G~~~~~~~~~~~~~~~- 314 (415)
.. .....++.. .++|.+++||+++++++.+++.+.+
T Consensus 292 ~~-------------------------------------~~~~~~~~~------~~l~~i~~~g~~l~~~~~~~~~~~~~ 328 (546)
T PLN02330 292 NP-------------------------------------IVEEFDLSK------LKLQAIMTAAAPLAPELLTAFEAKFP 328 (546)
T ss_pred Cc-------------------------------------cccccccch------heeeeEEEcCCcCCHHHHHHHHHHcC
Confidence 10 011111111 1589999999999999999999888
Q ss_pred CCceEEeeccCCCCceeeeec-CCc---ccccCcccccccCeEEEEeecCCCCCCCCCCCCCCeEEEecCCccccccCCc
Q 014951 315 GAPLTQGYGLTESCSGCFTSL-ADV---FNMIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRP 390 (415)
Q Consensus 315 ~~~~~~~yG~tE~~~~~~~~~-~~~---~~~~~~~G~~~~g~~~~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gY~~~~ 390 (415)
+.++++.||+||++.+..... ... ....+++|+|+++++++|+| ++++ .+++.|+.|||+++|+.++.||++++
T Consensus 329 ~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~v~i~d-~~~~-~~~p~g~~Gel~v~g~~~~~gy~~~~ 406 (546)
T PLN02330 329 GVQVQEAYGLTEHSCITLTHGDPEKGHGIAKKNSVGFILPNLEVKFID-PDTG-RSLPKNTPGELCVRSQCVMQGYYNNK 406 (546)
T ss_pred CCeEEecccccccccceecCCCccccccccccCccccccCCcEEEEEe-CCCC-ccCCCCCceEEEEecchhhhhhccCc
Confidence 889999999999876543321 111 12236899999999999999 4333 44566799999999999999999999
Q ss_pred hhhhhhh-cCCceecCceEEEcCCCC
Q 014951 391 DLTEEVI-VDGWFHTGDIGEWQPMEL 415 (415)
Q Consensus 391 ~~~~~~~-~~g~~~TGDlg~~d~~G~ 415 (415)
+.+.+.+ .+|||+|||+|++|+||+
T Consensus 407 ~~~~~~~~~~g~~~TGD~~~~~~dG~ 432 (546)
T PLN02330 407 EETDRTIDEDGWLHTGDIGYIDDDGD 432 (546)
T ss_pred cchhhhccCCCceecccEEEEeCCCc
Confidence 9998887 689999999999999985
No 55
>PRK06087 short chain acyl-CoA synthetase; Reviewed
Probab=100.00 E-value=2.5e-46 Score=367.76 Aligned_cols=351 Identities=22% Similarity=0.297 Sum_probs=274.5
Q ss_pred CccCCCCCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEcCCCh-----hhhhhcCc
Q 014951 1 MRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKI-----PSILSCLP 75 (415)
Q Consensus 1 L~~~Gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~-----~~~~~~~~ 75 (415)
|++.|+++||+|+++++|+++++++++||+++|++++|+++.++.+++.++++.++++++|+++... +.+.....
T Consensus 66 l~~~G~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 145 (547)
T PRK06087 66 LLAKGIEPGDRVAFQLPGWCEFTIIYLACLKVGAVSVPLLPSWREAELVWVLNKCQAKMFFAPTLFKQTRPVDLILPLQN 145 (547)
T ss_pred HHHcCCCCCCEEEEECCCCHHHHHHHHHHHHcCcEEeccchhcCHHHHHHHHHhcCCeEEEEecccccccHHHHHHHHHh
Confidence 4578999999999999999999999999999999999999999999999999999999999986432 22222222
Q ss_pred cCCCCccEEEEecCCCchhhHHhhhcCceeecHHHHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEeecHHHHHH
Q 014951 76 RCCLYLKTIVSFANVSSSQKKEAEELGVSCFSWEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAE 155 (415)
Q Consensus 76 ~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~ 155 (415)
. ....+.++.++...... ....+.++...............+++++|+|||||||.||+|.++|.++...
T Consensus 146 ~-~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PK~v~~t~~~l~~~ 215 (547)
T PRK06087 146 Q-LPQLQQIVGVDKLAPAT---------SSLSLSQIIADYEPLTTAITTHGDELAAVLFTSGTEGLPKGVMLTHNNILAS 215 (547)
T ss_pred h-CCCCcEEEEeCCcCCCc---------CccCHHHHhccCCcccCCCCCCCCCeEEEEeCCCCCCCCcEEEEecHHHHHH
Confidence 1 13344555554322100 1123444433221111223456789999999999999999999999999888
Q ss_pred hhhhhhhhhhccccCCCCCEEEEeCChhhHHHHHH-HHHhhhcCcEEEEeCC-CHHHHHHHHHhhCCeEEEeCcHHHHHH
Q 014951 156 VLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQII-ETHCIHKGCSIGFWRG-DVRYLMEDIQELKPTMFSGVPRVYDRI 233 (415)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~-~~~~l~~G~~vv~~~~-~~~~~~~~i~~~~~t~~~~~P~~~~~l 233 (415)
...+...+ .+..+|++++.+|++|.+++.. ++.+++.|+++++.+. ++..+++.++++++|+++++|..+..+
T Consensus 216 ~~~~~~~~-----~~~~~d~~l~~~pl~h~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~i~~~~~t~~~~~~~~~~~~ 290 (547)
T PRK06087 216 ERAYCARL-----NLTWQDVFMMPAPLGHATGFLHGVTAPFLIGARSVLLDIFTPDACLALLEQQRCTCMLGATPFIYDL 290 (547)
T ss_pred HHHHHHhc-----CCCCCCeEEEecchHHHHHHHHHHHHHHhcCCEEEecCCCCHHHHHHHHHHcCCCEEeccHHHHHHH
Confidence 77665554 6788999999999999999874 6778899999999877 999999999999999999988777666
Q ss_pred HHHHHHhhhcCChhhHHHHHHHHHhhhhccccCCCCCCccchhhHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHHHh
Q 014951 234 YTGISNKISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVT 313 (415)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~~G~~~~~~~~~~~~~~ 313 (415)
++..... . ...+++|.+++||+++++++.+.+.+
T Consensus 291 l~~~~~~-------------------------------------~--------~~~~~lr~i~~gG~~~~~~~~~~~~~- 324 (547)
T PRK06087 291 LNLLEKQ-------------------------------------P--------ADLSALRFFLCGGTTIPKKVARECQQ- 324 (547)
T ss_pred HhccccC-------------------------------------C--------CCCCCeEEEEEcCCCCCHHHHHHHHH-
Confidence 5421100 0 00137999999999999999988876
Q ss_pred cCCceEEeeccCCCCceeeeecCCc-ccccCcccccccCeEEEEeecCCCCCCCCCCCCCCeEEEecCCccccccCCchh
Q 014951 314 SGAPLTQGYGLTESCSGCFTSLADV-FNMIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDL 392 (415)
Q Consensus 314 ~~~~~~~~yG~tE~~~~~~~~~~~~-~~~~~~~G~~~~g~~~~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gY~~~~~~ 392 (415)
+++++++.||+||++.......... ....+++|+|++++.++++| +++.. ++.|+.|||+++|+.++.||+++++.
T Consensus 325 ~~~~l~~~YG~TE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d-~~~~~--~~~g~~Gel~v~g~~~~~gy~~~~~~ 401 (547)
T PRK06087 325 RGIKLLSVYGSTESSPHAVVNLDDPLSRFMHTDGYAAAGVEIKVVD-EARKT--LPPGCEGEEASRGPNVFMGYLDEPEL 401 (547)
T ss_pred cCCcEEEEecccccCCccccCCCcchhhcCCcCCccCCCceEEEEc-CCCCC--CcCCCcceEEEecccccccccCCHHH
Confidence 4999999999999987665443221 12236789999999999999 76654 45679999999999999999999999
Q ss_pred hhhhh-cCCceecCceEEEcCCCC
Q 014951 393 TEEVI-VDGWFHTGDIGEWQPMEL 415 (415)
Q Consensus 393 ~~~~~-~~g~~~TGDlg~~d~~G~ 415 (415)
+...| .+|||+|||++++|++|+
T Consensus 402 ~~~~~~~~g~~~TGDl~~~~~~g~ 425 (547)
T PRK06087 402 TARALDEEGWYYSGDLCRMDEAGY 425 (547)
T ss_pred HHHHhCCCCCcCcCceEEECCCCC
Confidence 98888 689999999999999985
No 56
>PRK05852 acyl-CoA synthetase; Validated
Probab=100.00 E-value=9.4e-47 Score=369.52 Aligned_cols=354 Identities=22% Similarity=0.297 Sum_probs=266.2
Q ss_pred CccCCCCCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEcCCChhhhhhcCccCCCC
Q 014951 1 MRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLY 80 (415)
Q Consensus 1 L~~~Gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~ 80 (415)
|.+.|+++||+|+++++|+++++++++||+++|++++++++.++.+++.++++.++++++|++............ ..
T Consensus 60 L~~~gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~---~~ 136 (534)
T PRK05852 60 LTRSGLLPGDRVALRMGSNAEFVVALLAASRADLVVVPLDPALPIAEQRVRSQAAGARVVLIDADGPHDRAEPTT---RW 136 (534)
T ss_pred HHhcCCCCCCEEEEECCCcHHHHHHHHHHHHcCcEEeecCCCCCcHHHHHHHHhCCCCEEEEcCCCcchhccccc---cc
Confidence 456899999999999999999999999999999999999999999999999999999999998754322111110 01
Q ss_pred ccEEEEecCCCchhhHHhhhcCceeecHHHHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEeecHHHHHHhhhhh
Q 014951 81 LKTIVSFANVSSSQKKEAEELGVSCFSWEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVD 160 (415)
Q Consensus 81 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~~~~ 160 (415)
....+.+....... .......+..... ............++.++++|||||||.||+|.++|+++...+....
T Consensus 137 ~~~~~~~~~~~~~~------~~~~~~~~~~~~~-~~~~~~~~~~~~~~~a~il~TSGTTG~PKgv~~~~~~~~~~~~~~~ 209 (534)
T PRK05852 137 WPLTVNVGGDSGPS------GGTLSVHLDAATE-PTPATSTPEGLRPDDAMIMFTGGTTGLPKMVPWTHANIASSVRAII 209 (534)
T ss_pred cceeeeeccccccc------ccccccccccccC-CCccccccCCCCCCceEEEeCCCCCCCCcEEEecHHHHHHHHHHHH
Confidence 11111111100000 0000000000000 0001111222357889999999999999999999999998888776
Q ss_pred hhhhhccccCCCCCEEEEeCChhhHHHHHH-HHHhhhcCcEEEEeCC---CHHHHHHHHHhhCCeEEEeCcHHHHHHHHH
Q 014951 161 QMFVVTGKVCSEEDTYFSFLPLAHIYDQII-ETHCIHKGCSIGFWRG---DVRYLMEDIQELKPTMFSGVPRVYDRIYTG 236 (415)
Q Consensus 161 ~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~-~~~~l~~G~~vv~~~~---~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~ 236 (415)
..+ .++.+|+++++.|++|..++.. ++.+++.|+++++.+. ++..+++.|+++++|.++++|++++.+.+.
T Consensus 210 ~~~-----~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~ 284 (534)
T PRK05852 210 TGY-----RLSPRDATVAVMPLYHGHGLIAALLATLASGGAVLLPARGRFSAHTFWDDIKAVGATWYTAVPTIHQILLER 284 (534)
T ss_pred HHh-----CCCCcceEEEecCcchhHHHHHHHHHHHhcCCeEEeCCCcCcCHHHHHHHHHHcCCcEEEcChHHHHHHHhh
Confidence 655 6789999999999999999875 6778899999888542 788999999999999999999999988653
Q ss_pred HHHhhhcCChhhHHHHHHHHHhhhhccccCCCCCCccchhhHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHHHhcCC
Q 014951 237 ISNKISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGA 316 (415)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~~G~~~~~~~~~~~~~~~~~ 316 (415)
..... . ....+++|.+.++|+++++++.+++.+.++.
T Consensus 285 ~~~~~------------------------------------------~-~~~~~~lr~i~~~G~~~~~~~~~~~~~~~~~ 321 (534)
T PRK05852 285 AATEP------------------------------------------S-GRKPAALRFIRSCSAPLTAETAQALQTEFAA 321 (534)
T ss_pred ccccc------------------------------------------c-cccCCCeeEEEECCCCCCHHHHHHHHHHhCC
Confidence 21100 0 0001489999999999999999999999999
Q ss_pred ceEEeeccCCCCceeeeecCCc----ccccCccccc--ccCeEEEEeecCCCCCCCCCCCCCCeEEEecCCccccccCCc
Q 014951 317 PLTQGYGLTESCSGCFTSLADV----FNMIGTVGVP--MTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRP 390 (415)
Q Consensus 317 ~~~~~yG~tE~~~~~~~~~~~~----~~~~~~~G~~--~~g~~~~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gY~~~~ 390 (415)
++++.||+||++..++....+. .....++|.+ .+|++++|+| +++.. ++.++.|||+++|+.+++||++++
T Consensus 322 ~v~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~g~~~~i~d-~~g~~--~~~g~~Gel~v~g~~v~~gY~~~~ 398 (534)
T PRK05852 322 PVVCAFGMTEATHQVTTTQIEGIGQTENPVVSTGLVGRSTGAQIRIVG-SDGLP--LPAGAVGEVWLRGTTVVRGYLGDP 398 (534)
T ss_pred ChhhccCccccchhhhcCCccccccccCcccccccCCCCCCCeEEEEC-CCCCC--CCCCCceEEEEecCcccchhcCCc
Confidence 9999999999987655432211 1111233444 6999999999 77654 456799999999999999999999
Q ss_pred hhhhhhhcCCceecCceEEEcCCCC
Q 014951 391 DLTEEVIVDGWFHTGDIGEWQPMEL 415 (415)
Q Consensus 391 ~~~~~~~~~g~~~TGDlg~~d~~G~ 415 (415)
+.+.+.|.+|||+|||+|++|+||+
T Consensus 399 ~~t~~~~~~g~~~TGD~~~~d~dG~ 423 (534)
T PRK05852 399 TITAANFTDGWLRTGDLGSLSAAGD 423 (534)
T ss_pred ccchhhhcCCCcccCceEEEeCCCc
Confidence 9999999999999999999999985
No 57
>PRK06155 crotonobetaine/carnitine-CoA ligase; Provisional
Probab=100.00 E-value=2e-46 Score=367.22 Aligned_cols=349 Identities=20% Similarity=0.248 Sum_probs=274.2
Q ss_pred CccCCCCCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEcCCChhhhhhcCccCCCC
Q 014951 1 MRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLY 80 (415)
Q Consensus 1 L~~~Gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~ 80 (415)
|.+.|+++||+|+++++|+++++++++||+++|++++|+++.++.+++..+++.++++++|++.+....+....... ..
T Consensus 63 L~~~gi~~g~~V~v~~~n~~~~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~~~~~~~-~~ 141 (542)
T PRK06155 63 LAAAGVKRGDRVALMCGNRIEFLDVFLGCAWLGAIAVPINTALRGPQLEHILRNSGARLLVVEAALLAALEAADPGD-LP 141 (542)
T ss_pred HHHcCCCCCCEEEEECCCChHHHHHHHHHHHhCCEEEEeccccCHHHHHHHHHhcCceEEEEChhhHHHHHHhcccc-cC
Confidence 45689999999999999999999999999999999999999999999999999999999999988776655433221 23
Q ss_pred ccEEEEecCCCchhhHHhhhcCceeecHHHHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEeecHHHHHHhhhhh
Q 014951 81 LKTIVSFANVSSSQKKEAEELGVSCFSWEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVD 160 (415)
Q Consensus 81 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~~~~ 160 (415)
.+.++.++...... .... +...++.. ...........++++++++|||||||.||+|.++|.++........
T Consensus 142 ~~~~~~~~~~~~~~------~~~~-~~~~~~~~-~~~~~~~~~~~~~~~a~il~TSGTTG~PK~V~~t~~~~~~~~~~~~ 213 (542)
T PRK06155 142 LPAVWLLDAPASVS------VPAG-WSTAPLPP-LDAPAPAAAVQPGDTAAILYTSGTTGPSKGVCCPHAQFYWWGRNSA 213 (542)
T ss_pred cceEEEecCccccc------cccc-cchhhhcc-cCCCCCCCCCCCCCeEEEEECCCCCCCCcEEEEEHHHHHHHHHHHH
Confidence 44555554322100 0000 00011111 1111122344678999999999999999999999999988776655
Q ss_pred hhhhhccccCCCCCEEEEeCChhhHHHHHHHHHhhhcCcEEEEeCC-CHHHHHHHHHhhCCeEEEeCcHHHHHHHHHHHH
Q 014951 161 QMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG-DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISN 239 (415)
Q Consensus 161 ~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~vv~~~~-~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~ 239 (415)
..+ .+.+.+++++.+|++|..++...+.+++.|+++++.+. ++..+++.|+++++|+++++|+++..+.+....
T Consensus 214 ~~~-----~~~~~~~~l~~~pl~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~ 288 (542)
T PRK06155 214 EDL-----EIGADDVLYTTLPLFHTNALNAFFQALLAGATYVLEPRFSASGFWPAVRRHGATVTYLLGAMVSILLSQPAR 288 (542)
T ss_pred Hhc-----CCCCCCEEEEecCHHHHHHHHHHHHHHHcCceEEeeCCCCHHHHHHHHHHhCCcEEEchHHHHHHHHcCcCc
Confidence 554 67889999999999999998878889999999998876 899999999999999999999998877541100
Q ss_pred hhhcCChhhHHHHHHHHHhhhhccccCCCCCCccchhhHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHHHhcCCceE
Q 014951 240 KISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLT 319 (415)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~~G~~~~~~~~~~~~~~~~~~~~ 319 (415)
.. ....++|.++.|| +++.+.+.+++.++.+++
T Consensus 289 -------------------------------------~~--------~~~~~l~~~~~g~--~~~~~~~~~~~~~~~~v~ 321 (542)
T PRK06155 289 -------------------------------------ES--------DRAHRVRVALGPG--VPAALHAAFRERFGVDLL 321 (542)
T ss_pred -------------------------------------cc--------cccCceEEEEEcC--CCHHHHHHHHHHcCCCEE
Confidence 00 0013788877666 568888888888999999
Q ss_pred EeeccCCCCceeeeecCCcccccCcccccccCeEEEEeecCCCCCCCCCCCCCCeEEEecC---CccccccCCchhhhhh
Q 014951 320 QGYGLTESCSGCFTSLADVFNMIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGN---TLFSGYYKRPDLTEEV 396 (415)
Q Consensus 320 ~~yG~tE~~~~~~~~~~~~~~~~~~~G~~~~g~~~~i~~~~~~~~~~~~~~~~Gel~v~~~---~~~~gY~~~~~~~~~~ 396 (415)
+.||+||++..+..... ....+++|.+.++++++|+| +++.. ++.|+.|||+++|+ .++.||+++++.+.+.
T Consensus 322 ~~YG~tE~~~~~~~~~~--~~~~~~vG~~~~~~~~~i~d-~~~~~--~~~g~~Gei~v~~~~~~~~~~GY~~~~~~~~~~ 396 (542)
T PRK06155 322 DGYGSTETNFVIAVTHG--SQRPGSMGRLAPGFEARVVD-EHDQE--LPDGEPGELLLRADEPFAFATGYFGMPEKTVEA 396 (542)
T ss_pred eeecccccCccccCCCC--CCCCCCcCccCCCceEEEEC-CCCCC--CCCCCceEEEEecCCccccchhhcCCHHHHHHh
Confidence 99999999877654322 23458899999999999999 66654 45668999999998 6999999999999999
Q ss_pred hcCCceecCceEEEcCCCC
Q 014951 397 IVDGWFHTGDIGEWQPMEL 415 (415)
Q Consensus 397 ~~~g~~~TGDlg~~d~~G~ 415 (415)
|.++||+|||+|++|+||+
T Consensus 397 ~~~~~~~TGD~~~~~~dG~ 415 (542)
T PRK06155 397 WRNLWFHTGDRVVRDADGW 415 (542)
T ss_pred hcCCcEeccceEEEcCCce
Confidence 9999999999999999985
No 58
>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase. Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.
Probab=100.00 E-value=2.9e-47 Score=410.44 Aligned_cols=354 Identities=17% Similarity=0.107 Sum_probs=268.8
Q ss_pred CccCCCCCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEcCCCh---hhhhhcCccC
Q 014951 1 MRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKI---PSILSCLPRC 77 (415)
Q Consensus 1 L~~~Gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~---~~~~~~~~~~ 77 (415)
|++.|+++||+|+|+++|+++++++++||+++|++++|++|.++.+++.++++.++++++|++.+.. ..+.......
T Consensus 287 L~~~gv~~g~~V~i~~~~~~~~i~~~lA~l~~G~~~vpldp~~p~~~~~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~ 366 (1389)
T TIGR03443 287 LLKTGIKRGDVVMIYAYRGVDLVVAVMGVLKAGATFSVIDPAYPPARQTIYLSVAKPRALIVIEKAGTLDQLVRDYIDKE 366 (1389)
T ss_pred HHHhCCCCCCEEEEEecCCHHHHHHHHHHHhhCcEEeccCCCCcHHHHHHHHHhcCCCEEEEeccccccchhhhhhhhcc
Confidence 4578999999999999999999999999999999999999999999999999999999999876421 1111111000
Q ss_pred C---CCccEEEEecCCCchhhHHhhhcCceeecHHHHHhcC---CCCCCCCCCCCCCeEEEEecCCCCCCCceEEeecHH
Q 014951 78 C---LYLKTIVSFANVSSSQKKEAEELGVSCFSWEEFLQLG---TLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQA 151 (415)
Q Consensus 78 ~---~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~th~~ 151 (415)
. .....+...+.... .. ........+..... ..........++++++|+|||||||.||||+++|++
T Consensus 367 ~~~~~~~~~~~~~~~~~~-~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~ii~TSGSTG~PKgV~~sh~~ 439 (1389)
T TIGR03443 367 LELRTEIPALALQDDGSL-VG------GSLEGGETDVLAPYQALKDTPTGVVVGPDSNPTLSFTSGSEGIPKGVLGRHFS 439 (1389)
T ss_pred cccccccceEEecccccc-cc------cccccccccccccccccccCCCCCcCCCCCceEEEECCCCCCCCCEEEeccHH
Confidence 0 01111111110000 00 00000000000000 001111234678999999999999999999999999
Q ss_pred HHHHhhhhhhhhhhccccCCCCCEEEEeCChhhHHHHHHHHHhhhcCcEEEEeCC----CHHHHHHHHHhhCCeEEEeCc
Q 014951 152 IVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG----DVRYLMEDIQELKPTMFSGVP 227 (415)
Q Consensus 152 l~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~vv~~~~----~~~~~~~~i~~~~~t~~~~~P 227 (415)
+.+.+.+....+ .+..+|+++...|++|..++..++.+++.|+++++.+. ++..+++.|+++++|+++++|
T Consensus 440 l~~~~~~~~~~~-----~~~~~d~~~~~~~~~~d~~~~~i~~~L~~G~~l~~~~~~~~~~~~~l~~~i~~~~vt~~~~~P 514 (1389)
T TIGR03443 440 LAYYFPWMAKRF-----GLSENDKFTMLSGIAHDPIQRDMFTPLFLGAQLLVPTADDIGTPGRLAEWMAKYGATVTHLTP 514 (1389)
T ss_pred HHHHHHHHHHhc-----CCCCCCEEEEecCceecchHHHHHHHHhCCCEEEEcChhhccCHHHHHHHHHHhCCeEEEeCH
Confidence 999988776666 67889999999999999888888999999999998764 688999999999999999999
Q ss_pred HHHHHHHHHHHHhhhcCChhhHHHHHHHHHhhhhccccCCCCCCccchhhHHHHHHHHHHhCCceeEEEEecCCCCHHHH
Q 014951 228 RVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVE 307 (415)
Q Consensus 228 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~~G~~~~~~~~ 307 (415)
++++.+..... . ...++|.+++||+++++...
T Consensus 515 s~~~~l~~~~~-------------------------------------------~-----~~~~lr~~~~gGe~l~~~~~ 546 (1389)
T TIGR03443 515 AMGQLLSAQAT-------------------------------------------T-----PIPSLHHAFFVGDILTKRDC 546 (1389)
T ss_pred HHHHHHHhccc-------------------------------------------c-----cCCCccEEEEecccCCHHHH
Confidence 99987643100 0 01379999999999999998
Q ss_pred HHHHHhc-CCceEEeeccCCCCceeeeecCCcc----------cccCcccccccCeEEEEeecCCCCCCCCCCCCCCeEE
Q 014951 308 EFLRVTS-GAPLTQGYGLTESCSGCFTSLADVF----------NMIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEIC 376 (415)
Q Consensus 308 ~~~~~~~-~~~~~~~yG~tE~~~~~~~~~~~~~----------~~~~~~G~~~~g~~~~i~~~~~~~~~~~~~~~~Gel~ 376 (415)
+.+.+.. +.++++.||+||++..++....... ....++|+|+++++++|+| +++...+++.|+.|||+
T Consensus 547 ~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~ivd-~~~~~~~~~~G~~GEL~ 625 (1389)
T TIGR03443 547 LRLQTLAENVCIVNMYGTTETQRAVSYFEIPSRSSDSTFLKNLKDVMPAGKGMKNVQLLVVN-RNDRTQTCGVGEVGEIY 625 (1389)
T ss_pred HHHHHhCCCCEEEECccCCccceeEEEEEccccccccchhhcccCcCcCCCccCCCEEEEEC-CccCCCcCCCCCceEEE
Confidence 8887654 6899999999999876654332111 1235789999999999999 66555677788999999
Q ss_pred EecCCccccccCCchhhhhhhc-----------------------------CCceecCceEEEcCCCC
Q 014951 377 LRGNTLFSGYYKRPDLTEEVIV-----------------------------DGWFHTGDIGEWQPMEL 415 (415)
Q Consensus 377 v~~~~~~~gY~~~~~~~~~~~~-----------------------------~g~~~TGDlg~~d~~G~ 415 (415)
|+||++++||+++|+.|.++|. +|||+|||+|++|+||+
T Consensus 626 i~G~~v~~GY~~~p~~t~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~TGDlg~~~~dG~ 693 (1389)
T TIGR03443 626 VRAGGLAEGYLGLPELNAEKFVNNWFVDPSHWIDLDKENNKPEREFWLGPRDRLYRTGDLGRYLPDGN 693 (1389)
T ss_pred ecccccchhcCCChhHhhhhccCCcccCcccccccccccccccccccCCCccceeecCCceeEcCCCC
Confidence 9999999999999999998872 57999999999999985
No 59
>PRK10946 entE enterobactin synthase subunit E; Provisional
Probab=100.00 E-value=2.2e-46 Score=366.77 Aligned_cols=351 Identities=19% Similarity=0.239 Sum_probs=272.2
Q ss_pred CccCCCCCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEcCCCh----hhhhhcCcc
Q 014951 1 MRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKI----PSILSCLPR 76 (415)
Q Consensus 1 L~~~Gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~----~~~~~~~~~ 76 (415)
|.+.|+++||+|+++++|+++++++++||+++|++++++.+.....++..+++.+++++++++.+.. .........
T Consensus 65 L~~~g~~~g~~V~v~~~n~~~~~~~~la~~~~G~v~v~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~~~~~~l~~ 144 (536)
T PRK10946 65 LRRQGIKPGDTALVQLGNVAEFYITFFALLKLGVAPVNALFSHQRSELNAYASQIEPALLIADRQHALFSDDDFLNTLVA 144 (536)
T ss_pred HHHcCCCCCCEEEEECCChHHHHHHHHHHHHcCeEEecCCccccHHHHHHHHhhcCCCEEEEeccccccchHHHHHHHHh
Confidence 3567999999999999999999999999999999888777777888999999999999999986531 111111111
Q ss_pred CCCCccEEEEecCCCchhhHHhhhcCceeecHHHHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEeecHHHHHHh
Q 014951 77 CCLYLKTIVSFANVSSSQKKEAEELGVSCFSWEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEV 156 (415)
Q Consensus 77 ~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~ 156 (415)
..+..+.++..+... ...+.++..............++++++++|||||||.||+|++||.++...+
T Consensus 145 ~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~s~~~l~~~~ 211 (536)
T PRK10946 145 EHSSLRVVLLLNDDG-------------EHSLDDAINHPAEDFTATPSPADEVAFFQLSGGSTGTPKLIPRTHNDYYYSV 211 (536)
T ss_pred hCCCceEEEEecCCC-------------CccHHHHhhCcccccccCCCCCCCeEEEEeCCCCCCCCcEEEEehHHHHHHH
Confidence 113333443332210 1223333332221222234567899999999999999999999999999988
Q ss_pred hhhhhhhhhccccCCCCCEEEEeCChhhHHHHHH--HHHhhhcCcEEEEeCC-CHHHHHHHHHhhCCeEEEeCcHHHHHH
Q 014951 157 LSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQII--ETHCIHKGCSIGFWRG-DVRYLMEDIQELKPTMFSGVPRVYDRI 233 (415)
Q Consensus 157 ~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~--~~~~l~~G~~vv~~~~-~~~~~~~~i~~~~~t~~~~~P~~~~~l 233 (415)
......+ .+..+|++++.+|++|.+++.. .+.+++.|+++++.+. ++..+++.++++++|++.++|.++..+
T Consensus 212 ~~~~~~~-----~~~~~~~~l~~~p~~h~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~l~~~~~t~~~~~p~~~~~l 286 (536)
T PRK10946 212 RRSVEIC-----GFTPQTRYLCALPAAHNYPMSSPGALGVFLAGGTVVLAPDPSATLCFPLIEKHQVNVTALVPPAVSLW 286 (536)
T ss_pred HHHHHhc-----CCCCCceEEEecCccccccchhhhHHHHhhcCcEEEECCCCCHHHHHHHHHHhCCcEEEeChHHHHHH
Confidence 8766555 6788999999999999888763 5678999999988765 899999999999999999999999988
Q ss_pred HHHHHHhhhcCChhhHHHHHHHHHhhhhccccCCCCCCccchhhHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHHHh
Q 014951 234 YTGISNKISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVT 313 (415)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~~G~~~~~~~~~~~~~~ 313 (415)
++.+...... ...+++|.+++||+++++++.+.+.+.
T Consensus 287 ~~~~~~~~~~-------------------------------------------~~~~~l~~v~~gg~~l~~~~~~~~~~~ 323 (536)
T PRK10946 287 LQAIAEGGSR-------------------------------------------AQLASLKLLQVGGARLSETLARRIPAE 323 (536)
T ss_pred HhhhcccCcc-------------------------------------------ccccceeEEEECCCCCCHHHHHHHHHh
Confidence 6532111000 000379999999999999999999988
Q ss_pred cCCceEEeeccCCCCceeeeecCCcccccCcccccc-cCeEEEEeecCCCCCCCCCCCCCCeEEEecCCccccccCCchh
Q 014951 314 SGAPLTQGYGLTESCSGCFTSLADVFNMIGTVGVPM-TTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDL 392 (415)
Q Consensus 314 ~~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~G~~~-~g~~~~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gY~~~~~~ 392 (415)
+++++++.||+||++..............+++|+|+ |++.++|+| +++. +++.|+.|||+++|+.++.||+++++.
T Consensus 324 ~g~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~G~p~~~~~~v~i~d-~~~~--~~~~g~~Gel~v~g~~~~~GY~~~~~~ 400 (536)
T PRK10946 324 LGCQLQQVFGMAEGLVNYTRLDDSDERIFTTQGRPMSPDDEVWVAD-ADGN--PLPQGEVGRLMTRGPYTFRGYYKSPQH 400 (536)
T ss_pred cCCeEEEeecccccceeeecCCCccccccccCCcccCCCceEEEEC-CCCC--CCCCCCccEEEEecCccchhhcCCccc
Confidence 999999999999965433222212223357899998 899999999 6664 455679999999999999999999999
Q ss_pred hhhhh-cCCceecCceEEEcCCCC
Q 014951 393 TEEVI-VDGWFHTGDIGEWQPMEL 415 (415)
Q Consensus 393 ~~~~~-~~g~~~TGDlg~~d~~G~ 415 (415)
+.+.| .+|||+|||+|++|+||+
T Consensus 401 t~~~~~~d~~~~TGDl~~~d~~G~ 424 (536)
T PRK10946 401 NASAFDANGFYCSGDLVSIDPDGY 424 (536)
T ss_pred chhhcccCCceecCceEEECCCCc
Confidence 99988 689999999999999985
No 60
>PLN03051 acyl-activating enzyme; Provisional
Probab=100.00 E-value=1.1e-46 Score=365.42 Aligned_cols=343 Identities=17% Similarity=0.126 Sum_probs=246.7
Q ss_pred cCCcHhHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEcCCC------hhhhhhcCccCCCCccEEEEecC
Q 014951 16 GSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENK------IPSILSCLPRCCLYLKTIVSFAN 89 (415)
Q Consensus 16 ~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~ii~~~~~------~~~~~~~~~~~~~~~~~v~~~~~ 89 (415)
++|++|+++++|||+++|++++|+++.++++++.++++.++++++|+++.. .+.+...... ...+.++....
T Consensus 1 ~~n~~e~~~~~lA~~~~Gav~vpl~~~~~~~el~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~--~~~~~i~~~~~ 78 (499)
T PLN03051 1 MPMTVDAVIIYLAIVLAGCVVVSVADSFSAKEIATRLDISGAKGVFTQDVVLRGGRALPLYSKVVEA--APAKAIVLPAA 78 (499)
T ss_pred CCCcHHHHHHHHHHHHcCCEEEeeCCCCCHHHHHHHHHhcCceEEEecCceeeCCeeecchhhhhhc--ccceEEEEecc
Confidence 589999999999999999999999999999999999999999999998653 1122111111 01122222211
Q ss_pred CCchhhHHhhhcCceeecHHHHHhcCC-------CCCCCCCCCCCCeEEEEecCCCCCCCceEEeecHHHHHHhhhhhhh
Q 014951 90 VSSSQKKEAEELGVSCFSWEEFLQLGT-------LDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQM 162 (415)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~~~~~~ 162 (415)
...... ........++++..... .........++|+++|+|||||||.||||++||.++..........
T Consensus 79 ~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~yTSGTTG~PKgV~~sh~~~~~~~~~~~~~ 154 (499)
T PLN03051 79 GEPVAV----PLREQDLSWCDFLGVAAAQGSVGGNEYSPVYAPVESVTNILFSSGTTGEPKAIPWTHLSPLRCASDGWAH 154 (499)
T ss_pred CcccCC----ccccCcccHHHHHhhhccccccccccCCcccCCccceEEEEeCCCCCCCCceEEEccchHHHHHHHHHHh
Confidence 100000 00001224555442110 0111112356899999999999999999999999988765443333
Q ss_pred hhhccccCCCCCEEEEeCChhhHHHHHHHHHhhhcCcEEEEeCC--CHHHHHHHHHhhCCeEEEeCcHHHHHHHHHHHHh
Q 014951 163 FVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNK 240 (415)
Q Consensus 163 ~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~vv~~~~--~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~ 240 (415)
+ .+..+|++++.+|++|.+++..++.+++.|+++++.+. ++..+++.|+++++|++.++|+++..+++....
T Consensus 155 ~-----~~~~~d~~l~~~pl~h~~g~~~~~~~l~~G~t~v~~~~~~~~~~~~~~i~~~~vt~~~~vP~~~~~l~~~~~~- 228 (499)
T PLN03051 155 M-----DIQPGDVVCWPTNLGWMMGPWLLYSAFLNGATLALYGGAPLGRGFGKFVQDAGVTVLGLVPSIVKAWRHTGAF- 228 (499)
T ss_pred c-----CCCCCCEEEEccCcceeeehHHHHHHHHcCCEEEecCCCCCcHHHHHHHHHhCCcEEEeCHHHHHHHHhcCcc-
Confidence 3 56788999999999999887767788999999998863 789999999999999999999999887541000
Q ss_pred hhcCChhhHHHHHHHHHhhhhccccCCCCCCccchhhHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHHHhc--CCce
Q 014951 241 ISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTS--GAPL 318 (415)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~~G~~~~~~~~~~~~~~~--~~~~ 318 (415)
.....++ ++||.+++||+++++++.+++++.+ +.++
T Consensus 229 ----------------------------------~~~~~~~--------~~Lr~i~~gG~~~~~~~~~~~~~~~~~~~~~ 266 (499)
T PLN03051 229 ----------------------------------AMEGLDW--------SKLRVFASTGEASAVDDVLWLSSVRGYYKPV 266 (499)
T ss_pred ----------------------------------ccccCCc--------hhheEEEecCCCCCHHHHHHHHHhcccccee
Confidence 0000111 3799999999999999988887643 4789
Q ss_pred EEeeccCCCCceeeeecCCcccccCcccccccCeEEEEeecCCCCCCCCCCCCCCeEEEecCCc--cccccCCchhhhhh
Q 014951 319 TQGYGLTESCSGCFTSLADVFNMIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTL--FSGYYKRPDLTEEV 396 (415)
Q Consensus 319 ~~~yG~tE~~~~~~~~~~~~~~~~~~~G~~~~g~~~~i~~~~~~~~~~~~~~~~Gel~v~~~~~--~~gY~~~~~~~~~~ 396 (415)
++.||+||++..+...........+++|+|.+|++++|+| ++++.++.+.++.|||+++||.+ +.|||+++ .+ +.
T Consensus 267 ~~~YG~TE~~~~~~~~~~~~~~~~~~~G~p~~~~~~~ivd-~~g~~~~~g~~~~Gel~v~g~~~~~~~gy~~~~-~~-~~ 343 (499)
T PLN03051 267 IEYCGGTELASGYISSTLLQPQAPGAFSTASLGTRFVLLN-DNGVPYPDDQPCVGEVALAPPMLGASDRLLNAD-HD-KV 343 (499)
T ss_pred EeeeccccccceeecccccCCCCCccccCCCCCceEEEEC-CCCCCCCCCCCcceEEEEecCcCCCCccccCCc-cc-ce
Confidence 9999999987544332222222347899999999999999 77776655444689999999976 58999765 33 33
Q ss_pred hcCC----------ceecCceEEEcCCCC
Q 014951 397 IVDG----------WFHTGDIGEWQPMEL 415 (415)
Q Consensus 397 ~~~g----------~~~TGDlg~~d~~G~ 415 (415)
+.+| ||+|||+|++|+||+
T Consensus 344 ~~~g~~~~~~~~~~~~~TGDlg~~d~dG~ 372 (499)
T PLN03051 344 YYKGMPMYGSKGMPLRRHGDIMKRTPGGY 372 (499)
T ss_pred eeecCCccccCCcceeecCCeEEECCCCc
Confidence 4344 689999999999996
No 61
>PRK08043 bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase; Validated
Probab=100.00 E-value=6e-47 Score=381.89 Aligned_cols=341 Identities=20% Similarity=0.310 Sum_probs=256.9
Q ss_pred CCCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEcCCChhhhhh-cCccCCCCccEE
Q 014951 6 VNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILS-CLPRCCLYLKTI 84 (415)
Q Consensus 6 v~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~-~~~~~~~~~~~v 84 (415)
+++||+|+++++|++|+++++|||+++|++++|+++.++.+++.+++++++++++|++.+..+.... .......... +
T Consensus 252 ~~~gd~Val~~~n~~e~~~~~lA~~~~G~v~vpl~~~~~~~~l~~~l~~s~~~~vi~~~~~~~~~~~~~~~~~~~~~~-~ 330 (718)
T PRK08043 252 SVEGERIGLMLPNATISAAVIFGASLRRRIPAMMNYTAGVKGLTSAITAAEIKTIFTSRQFLDKGKLWHLPEQLTQVR-W 330 (718)
T ss_pred cCCCceEEEEcCCcHHHHHHHHHHHHcCCcccccccCcCHHHHHHHHHHcCCcEEEEcHHHHhhccCCChhhhhcccc-E
Confidence 5899999999999999999999999999999999999999999999999999999998765432110 0010011111 2
Q ss_pred EEecCCCchhhHHhhhcCceeecHHHHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEeecHHHHHHhhhhhhhhh
Q 014951 85 VSFANVSSSQKKEAEELGVSCFSWEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFV 164 (415)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~~~~~~~~ 164 (415)
+.++....... .........+... ......+..++|+++++|||||||.||||++||.++..........+
T Consensus 331 i~~~~~~~~~~-----~~~~~~~~~~~~~---~~~~~~~~~~~d~a~i~~TSGTTG~PKgv~~sh~~l~~~~~~~~~~~- 401 (718)
T PRK08043 331 VYLEDLKDDVT-----TADKLWIFAHLLM---PRLAQVKQQPEDAALILFTSGSEGHPKGVVHSHKSLLANVEQIKTIA- 401 (718)
T ss_pred EEhhhhhhhcc-----hhHHHHHHHHHhC---CccccCCCCCCCeEEEEECCCCCCCCCEEEEcHHHHHHHHHHHHHhh-
Confidence 22221100000 0000000000000 01111234678999999999999999999999999998877665544
Q ss_pred hccccCCCCCEEEEeCChhhHHHHHH-HHHhhhcCcEEEEeCC--CHHHHHHHHHhhCCeEEEeCcHHHHHHHHHHHHhh
Q 014951 165 VTGKVCSEEDTYFSFLPLAHIYDQII-ETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKI 241 (415)
Q Consensus 165 ~~~~~~~~~d~~l~~~p~~~~~~~~~-~~~~l~~G~~vv~~~~--~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~ 241 (415)
.+..+|++++.+|++|.+++.. ++.++..|+++++.+. ++..+++.++++++|+++++|+++..+.+..
T Consensus 402 ----~~~~~d~~l~~~Pl~h~~g~~~~~~~~l~~G~~vv~~~~~~~~~~~~~~i~~~~vt~~~~~p~~~~~l~~~~---- 473 (718)
T PRK08043 402 ----DFTPNDRFMSALPLFHSFGLTVGLFTPLLTGAEVFLYPSPLHYRIVPELVYDRNCTVLFGTSTFLGNYARFA---- 473 (718)
T ss_pred ----CCCccCeEEEcCcchhhhhhHHHHHHHHHcCCEEEEeCCcccHHHHHHHHHhcCCeEEEchHHHHHHhhhhc----
Confidence 6788999999999999999875 6788999999998864 6778899999999999999999887653310
Q ss_pred hcCChhhHHHHHHHHHhhhhccccCCCCCCccchhhHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHHHhcCCceEEe
Q 014951 242 SSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQG 321 (415)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~~G~~~~~~~~~~~~~~~~~~~~~~ 321 (415)
...++ ++||.+++||+++++++.+.+++.+++++++.
T Consensus 474 -----------------------------------~~~~~--------~~lr~i~~gg~~l~~~~~~~~~~~~g~~l~~~ 510 (718)
T PRK08043 474 -----------------------------------NPYDF--------ARLRYVVAGAEKLQESTKQLWQDKFGLRILEG 510 (718)
T ss_pred -----------------------------------Ccccc--------cceEEEEEeCccCCHHHHHHHHHHcCCCeecc
Confidence 00011 38999999999999999999999899999999
Q ss_pred eccCCCCceeeeecCCcccccCcccccccCeEEEEeecCCCCCCCCCCCCCCeEEEecCCccccccC--Cchh-------
Q 014951 322 YGLTESCSGCFTSLADVFNMIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYK--RPDL------- 392 (415)
Q Consensus 322 yG~tE~~~~~~~~~~~~~~~~~~~G~~~~g~~~~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gY~~--~~~~------- 392 (415)
||+||++..++...+.. ...+++|+|+||++++|++ +++. ++.|||+++|++++.|||+ +++.
T Consensus 511 YG~TE~~~~~~~~~~~~-~~~~svG~p~pg~~~~i~d-~~~~------~~~Gel~v~g~~v~~GY~~~e~~~~~~~~~~~ 582 (718)
T PRK08043 511 YGVTECAPVVSINVPMA-AKPGTVGRILPGMDARLLS-VPGI------EQGGRLQLKGPNIMNGYLRVEKPGVLEVPTAE 582 (718)
T ss_pred cCcccccceEEecCCcc-cCCCCCCCcCCCCeeEEec-CCCC------CCceEEEEecCCccccccCCCCcccccccccc
Confidence 99999987765543322 3458999999999999998 4432 3569999999999999998 4442
Q ss_pred hhhh-hcCCceecCceEEEcCCCC
Q 014951 393 TEEV-IVDGWFHTGDIGEWQPMEL 415 (415)
Q Consensus 393 ~~~~-~~~g~~~TGDlg~~d~~G~ 415 (415)
+.+. +.+|||+|||+|++|+||+
T Consensus 583 ~~~~~~~~gw~~TGDlg~~d~dG~ 606 (718)
T PRK08043 583 NARGEMERGWYDTGDIVRFDEQGF 606 (718)
T ss_pred cccccccCCeEecCCEEEEcCCCc
Confidence 2222 2579999999999999996
No 62
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=100.00 E-value=9.5e-47 Score=401.14 Aligned_cols=351 Identities=23% Similarity=0.330 Sum_probs=275.3
Q ss_pred CCCCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEcCCChhhhhhcCc-cCCCCccE
Q 014951 5 GVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLP-RCCLYLKT 83 (415)
Q Consensus 5 Gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~-~~~~~~~~ 83 (415)
++++||+|+++++|+++++++++||+++|++++|+++..+.+++.++++++++++++++++..+.+..... ........
T Consensus 661 ~~~~g~~V~i~~~n~~~~~~~~la~~~~G~v~v~l~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~ 740 (1146)
T PRK08633 661 ELKDEENVGILLPPSVAGALANLALLLAGKVPVNLNYTASEAALKSAIEQAQIKTVITSRKFLEKLKNKGFDLELPENVK 740 (1146)
T ss_pred hCCCCCeEEEECCCchHHHHHHHHHHHcCCEEEEeCCCcCHHHHHHHHHHcCCCEEEEcHHHHHHHhccCCchhcccCce
Confidence 57999999999999999999999999999999999999999999999999999999999876655432110 01122234
Q ss_pred EEEecCCCchhhHHhhhcCceeecHHHHHhcCCCC------CCCCCCCCCCeEEEEecCCCCCCCceEEeecHHHHHHhh
Q 014951 84 IVSFANVSSSQKKEAEELGVSCFSWEEFLQLGTLD------CELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVL 157 (415)
Q Consensus 84 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~ 157 (415)
++..++...... ....+.+.......+ .......++|+++++|||||||.||+|.+||+++.....
T Consensus 741 ~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~ 812 (1146)
T PRK08633 741 VIYLEDLKAKIS--------KVDKLTALLAARLLPARLLKRLYGPTFKPDDTATIIFSSGSEGEPKGVMLSHHNILSNIE 812 (1146)
T ss_pred EEEeehhccccc--------hhHHHHHHHHhccCCHHHHHhhccCCCCCCCEEEEEECCCCCCCCceEEechHHHHHHHH
Confidence 444433211000 001111111110000 001345679999999999999999999999999999887
Q ss_pred hhhhhhhhccccCCCCCEEEEeCChhhHHHHHH-HHHhhhcCcEEEEeCC--CHHHHHHHHHhhCCeEEEeCcHHHHHHH
Q 014951 158 SVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQII-ETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTMFSGVPRVYDRIY 234 (415)
Q Consensus 158 ~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~-~~~~l~~G~~vv~~~~--~~~~~~~~i~~~~~t~~~~~P~~~~~l~ 234 (415)
.....+ ...++|++++.+|++|.+++.. .+.++..|+++++.+. ++..+++.++++++|++.++|++++.+.
T Consensus 813 ~~~~~~-----~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~g~~~v~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~ 887 (1146)
T PRK08633 813 QISDVF-----NLRNDDVILSSLPFFHSFGLTVTLWLPLLEGIKVVYHPDPTDALGIAKLVAKHRATILLGTPTFLRLYL 887 (1146)
T ss_pred HHHHhc-----CCCCCCEEEEcCcHHHHHhHHHHHHHHHHCCCEEEEeCCCCCHHHHHHHHHHcCCeEEEecHHHHHHHH
Confidence 766655 6778999999999999999876 7788999999988764 8999999999999999999999998875
Q ss_pred HHHHHhhhcCChhhHHHHHHHHHhhhhccccCCCCCCccchhhHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHHHhc
Q 014951 235 TGISNKISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTS 314 (415)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~~G~~~~~~~~~~~~~~~ 314 (415)
+... .+..++ +++|.+++||+++++++.+++++.+
T Consensus 888 ~~~~-------------------------------------~~~~~~--------~~lr~~~~gg~~~~~~~~~~~~~~~ 922 (1146)
T PRK08633 888 RNKK-------------------------------------LHPLMF--------ASLRLVVAGAEKLKPEVADAFEEKF 922 (1146)
T ss_pred hccc-------------------------------------cCcccC--------CCeeeEEEcCCcCCHHHHHHHHHHh
Confidence 4110 111111 3899999999999999999999999
Q ss_pred CCceEEeeccCCCCceeeeecCCc---------ccccCcccccccCeEEEEeecCCCCCCCCCCCCCCeEEEecCCcccc
Q 014951 315 GAPLTQGYGLTESCSGCFTSLADV---------FNMIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSG 385 (415)
Q Consensus 315 ~~~~~~~yG~tE~~~~~~~~~~~~---------~~~~~~~G~~~~g~~~~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~g 385 (415)
+.++++.||+||++.++....++. ..+.+++|+|+||++++|+| ++++ .+++.|+.|||+++|+.++.|
T Consensus 923 g~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~p~~~~~v~i~d-~~~~-~~~~~g~~Gel~v~g~~~~~g 1000 (1146)
T PRK08633 923 GIRILEGYGATETSPVASVNLPDVLAADFKRQTGSKEGSVGMPLPGVAVRIVD-PETF-EELPPGEDGLILIGGPQVMKG 1000 (1146)
T ss_pred CCCeecccccccCcceEEEecCcccccccccccCCCCCCccccCCCCEEEEEc-CCCC-ccCCCCCceEEEEcCCCcccc
Confidence 999999999999987766543321 12357899999999999999 4433 445677999999999999999
Q ss_pred ccCCchhhhhhhcC----CceecCceEEEcCCCC
Q 014951 386 YYKRPDLTEEVIVD----GWFHTGDIGEWQPMEL 415 (415)
Q Consensus 386 Y~~~~~~~~~~~~~----g~~~TGDlg~~d~~G~ 415 (415)
|+++|+.+.+.|.+ |||+|||+|++|+||+
T Consensus 1001 Y~~~~~~t~~~~~~~~~~~~~~TGD~~~~~~~g~ 1034 (1146)
T PRK08633 1001 YLGDPEKTAEVIKDIDGIGWYVTGDKGHLDEDGF 1034 (1146)
T ss_pred ccCCccchHHHhhcCCCCCeEECCCEEEEcCCce
Confidence 99999999998876 9999999999999985
No 63
>PLN03102 acyl-activating enzyme; Provisional
Probab=100.00 E-value=1.3e-46 Score=370.83 Aligned_cols=357 Identities=21% Similarity=0.272 Sum_probs=258.9
Q ss_pred CccCCCCCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEcCCChhhhhhcCccCC--
Q 014951 1 MRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCC-- 78 (415)
Q Consensus 1 L~~~Gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~-- 78 (415)
|.++|+++||+|+|+++|++++++++|||+++|++++||++.++.+++.++++.++++++|++++..+.+.......-
T Consensus 56 L~~~Gl~~gd~Vai~~~n~~e~~~~~la~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~ 135 (579)
T PLN03102 56 LISLNITKNDVVSVLAPNTPAMYEMHFAVPMAGAVLNPINTRLDATSIAAILRHAKPKILFVDRSFEPLAREVLHLLSSE 135 (579)
T ss_pred HHHcCCCCCCEEEEEcCCcHHHHHHHHHHHhcCcEEeeccccCCHHHHHHHHhccCCeEEEEChhhHHHHHHHHhhcccc
Confidence 356799999999999999999999999999999999999999999999999999999999999877665544322110
Q ss_pred --CCccEEEEecCCCchhhHHhhhcCceeecHHHHHhcCCCCC-----CCCCCCCCCeEEEEecCCCCCCCceEEeecHH
Q 014951 79 --LYLKTIVSFANVSSSQKKEAEELGVSCFSWEEFLQLGTLDC-----ELPPKKKTNISTIMYTSGTTGEPKGVVLTNQA 151 (415)
Q Consensus 79 --~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~i~~TSGtTG~pK~v~~th~~ 151 (415)
.....++.++....... ......+++++........ ......++++++|+|||||||.||+|+++|.+
T Consensus 136 ~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~il~TSGTTG~PK~v~~s~~~ 210 (579)
T PLN03102 136 DSNLNLPVIFIHEIDFPKR-----PSSEELDYECLIQRGEPTPSLVARMFRIQDEHDPISLNYTSGTTADPKGVVISHRG 210 (579)
T ss_pred ccccCceEEEecccccccC-----CcccccCHHHHHhccCCCCcccccccccCCCCCcEEEEeCCcCCCCCCEEEEecHH
Confidence 01123444432211000 0011234455443321110 01224568999999999999999999999999
Q ss_pred HHHHhhhhhhhhhhccccCCCCCEEEEeCChhhHHHHHHHHHhhhcCcEEEEeCC-CHHHHHHHHHhhCCeEEEeCcHHH
Q 014951 152 IVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG-DVRYLMEDIQELKPTMFSGVPRVY 230 (415)
Q Consensus 152 l~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~vv~~~~-~~~~~~~~i~~~~~t~~~~~P~~~ 230 (415)
+.......... ..+...++++..+|++|..++...+.++..|+++++.+. ++..+++.|+++++|++.++|+++
T Consensus 211 ~~~~~~~~~~~-----~~~~~~~~~l~~~pl~h~~g~~~~~~~~~~g~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~ 285 (579)
T PLN03102 211 AYLSTLSAIIG-----WEMGTCPVYLWTLPMFHCNGWTFTWGTAARGGTSVCMRHVTAPEIYKNIEMHNVTHMCCVPTVF 285 (579)
T ss_pred HHHHHHHHHhh-----cCCCCCCeEEecCChhhhcchhHHHHHHHhcCcEEeeccCChHHHHHHHHHcCCeEEEeChHHH
Confidence 75544332111 245567889999999999988777778888888887765 889999999999999999999999
Q ss_pred HHHHHHHHHhhhcCChhhHHHHHHHHHhhhhccccCCCCCCccchhhHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHH
Q 014951 231 DRIYTGISNKISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFL 310 (415)
Q Consensus 231 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~~G~~~~~~~~~~~ 310 (415)
..+.+..... .... .+++.+++||+++++.+.+++
T Consensus 286 ~~l~~~~~~~-------------------------------------~~~~--------~~~~~~~~gg~~~~~~~~~~~ 320 (579)
T PLN03102 286 NILLKGNSLD-------------------------------------LSPR--------SGPVHVLTGGSPPPAALVKKV 320 (579)
T ss_pred HHHHhCcccc-------------------------------------cCCc--------ccceEEEECCCCCCHHHHHHH
Confidence 9886521100 0000 256788999999999999998
Q ss_pred HHhcCCceEEeeccCCCCceeeeecCC-------c------ccccCcccccccCeEEEEeecCCCCCCCCCCCCCCeEEE
Q 014951 311 RVTSGAPLTQGYGLTESCSGCFTSLAD-------V------FNMIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICL 377 (415)
Q Consensus 311 ~~~~~~~~~~~yG~tE~~~~~~~~~~~-------~------~~~~~~~G~~~~g~~~~i~~~~~~~~~~~~~~~~Gel~v 377 (415)
++ ++.++++.||+||+++.+...... . ....+..+.+.++++ +.+.+.+..++.+.++.|||++
T Consensus 321 ~~-~g~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~--i~~~~~~~~v~~~~~~~GEl~v 397 (579)
T PLN03102 321 QR-LGFQVMHAYGLTEATGPVLFCEWQDEWNRLPENQQMELKARQGVSILGLADVD--VKNKETQESVPRDGKTMGEIVI 397 (579)
T ss_pred HH-cCCeEEeecCccccCccccccccccccccCCcccccccccCCCcccccccceE--EeccccccccCCCCCCceEEEE
Confidence 75 699999999999998654322110 0 011233444555444 4442333334443347899999
Q ss_pred ecCCccccccCCchhhhhhhcCCceecCceEEEcCCCC
Q 014951 378 RGNTLFSGYYKRPDLTEEVIVDGWFHTGDIGEWQPMEL 415 (415)
Q Consensus 378 ~~~~~~~gY~~~~~~~~~~~~~g~~~TGDlg~~d~~G~ 415 (415)
+|+.++.|||++++.+.+.|.+|||+|||+|++|+||+
T Consensus 398 ~g~~~~~GY~~~~~~t~~~f~~gw~~TGDlg~~d~dG~ 435 (579)
T PLN03102 398 KGSSIMKGYLKNPKATSEAFKHGWLNTGDVGVIHPDGH 435 (579)
T ss_pred ECcchhhhhcCChhhhHhhhccCceecCceEEEcCCCe
Confidence 99999999999999999999999999999999999985
No 64
>PRK07470 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.1e-46 Score=368.74 Aligned_cols=350 Identities=21% Similarity=0.292 Sum_probs=271.6
Q ss_pred CccCCCCCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEcCCChhhhhhcCccCCCC
Q 014951 1 MRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLY 80 (415)
Q Consensus 1 L~~~Gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~ 80 (415)
|++.|+++||+|+++++|+++++++++||+++|++++++++.++.+++.++++.++++.++++.+........... ...
T Consensus 49 L~~~g~~~g~~v~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~-~~~ 127 (528)
T PRK07470 49 LAARGVRKGDRILVHSRNCNQMFESMFAAFRLGAVWVPTNFRQTPDEVAYLAEASGARAMICHADFPEHAAAVRAA-SPD 127 (528)
T ss_pred HHHhCCCCCCEEEEEcCCCHHHHHHHHHHHhCCeEEEecCccCCHHHHHHHHHhcCceEEEEcchhHHHHHHHHhh-CCc
Confidence 4568999999999999999999999999999999999999999999999999999999999998765544332211 123
Q ss_pred ccEEEEecCCCchhhHHhhhcCceeecHHHHHhcC-CCCCCCCCCCCCCeEEEEecCCCCCCCceEEeecHHHHHHhhhh
Q 014951 81 LKTIVSFANVSSSQKKEAEELGVSCFSWEEFLQLG-TLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSV 159 (415)
Q Consensus 81 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~~~ 159 (415)
...++.++.... ...++++.... ..........++++++|+|||||||.||+|+++|.++...+...
T Consensus 128 ~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~ 195 (528)
T PRK07470 128 LTHVVAIGGARA------------GLDYEALVARHLGARVANAAVDHDDPCWFFFTSGTTGRPKAAVLTHGQMAFVITNH 195 (528)
T ss_pred CceEEEeCCCcc------------cccHHHHHhcCCCCCCCcccCCCCCeEEEEeCCCCCCCCcEEEEehhhHHHHHHHH
Confidence 334444433210 23444444332 11122334567899999999999999999999999987655432
Q ss_pred hhhhhhccccCCCCCEEEEeCChhhHHHHHHHHHhhhcCcEEEEeCC---CHHHHHHHHHhhCCeEEEeCcHHHHHHHHH
Q 014951 160 DQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG---DVRYLMEDIQELKPTMFSGVPRVYDRIYTG 236 (415)
Q Consensus 160 ~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~vv~~~~---~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~ 236 (415)
...+ .......|+++.++|++|.+++..++ .++.|+++++.+. ++..+++.|+++++|++.++|++++.+.+.
T Consensus 196 ~~~~---~~~~~~~d~~l~~~p~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~ 271 (528)
T PRK07470 196 LADL---MPGTTEQDASLVVAPLSHGAGIHQLC-QVARGAATVLLPSERFDPAEVWALVERHRVTNLFTVPTILKMLVEH 271 (528)
T ss_pred HHHh---ccCCCcccEEEEeccchhHHHHHHHH-HHhcCceEEEecccCcCHHHHHHHHHhcCCeEEechHHHHHHHHhC
Confidence 2211 01346789999999999999886544 4667777666542 899999999999999999999999887541
Q ss_pred HHHhhhcCChhhHHHHHHHHHhhhhccccCCCCCCccchhhHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHHHhcCC
Q 014951 237 ISNKISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGA 316 (415)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~~G~~~~~~~~~~~~~~~~~ 316 (415)
.. ....+ .+++|.+++||++++++..+++.+.++.
T Consensus 272 ~~-------------------------------------~~~~~--------~~~lr~~~~gG~~l~~~~~~~~~~~~g~ 306 (528)
T PRK07470 272 PA-------------------------------------VDRYD--------HSSLRYVIYAGAPMYRADQKRALAKLGK 306 (528)
T ss_pred cC-------------------------------------cCCCC--------CcceEEEEEcCCCCCHHHHHHHHHHhCc
Confidence 10 00001 1489999999999999999999888899
Q ss_pred ceEEeeccCCCCceeeeecCC-------cccccCcccccccCeEEEEeecCCCCCCCCCCCCCCeEEEecCCccccccCC
Q 014951 317 PLTQGYGLTESCSGCFTSLAD-------VFNMIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKR 389 (415)
Q Consensus 317 ~~~~~yG~tE~~~~~~~~~~~-------~~~~~~~~G~~~~g~~~~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gY~~~ 389 (415)
.+++.||+||+++.+...... .....+++|+|+++++++++| +++.. ++.|+.|||+++|+.++.||+++
T Consensus 307 ~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~g~~~~i~d-~~~~~--~~~g~~Gel~i~~~~~~~gy~~~ 383 (528)
T PRK07470 307 VLVQYFGLGEVTGNITVLPPALHDAEDGPDARIGTCGFERTGMEVQIQD-DEGRE--LPPGETGEICVIGPAVFAGYYNN 383 (528)
T ss_pred HHHHhCCCcccCCceeecchhhccccccccceeeccCcccCCcEEEEEC-CCCCC--CCCCCceEEEEeCCccchhhcCC
Confidence 999999999998766543221 112347899999999999999 77654 45679999999999999999999
Q ss_pred chhhhhhhcCCceecCceEEEcCCCC
Q 014951 390 PDLTEEVIVDGWFHTGDIGEWQPMEL 415 (415)
Q Consensus 390 ~~~~~~~~~~g~~~TGDlg~~d~~G~ 415 (415)
++.+.+.|.+|||+|||+|++|+||+
T Consensus 384 ~~~~~~~~~~~~~~TGDl~~~~~~g~ 409 (528)
T PRK07470 384 PEANAKAFRDGWFRTGDLGHLDARGF 409 (528)
T ss_pred HHHHHhhhcCCcEecceeEEEccCCe
Confidence 99999889999999999999999985
No 65
>TIGR03098 ligase_PEP_1 acyl-CoA ligase (AMP-forming), exosortase system type 1 associated. This group of proteins contains an AMP-binding domain (pfam00501) associated with acyl CoA-ligases. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present next to a decarboxylase enzyme. A number of sequences from Burkholderia species also hit this model, but the genomic context is obviously different. The hypothesis of a constant substrate for this family is only strong where the exosortase context is present.
Probab=100.00 E-value=2.8e-46 Score=365.19 Aligned_cols=354 Identities=23% Similarity=0.326 Sum_probs=281.7
Q ss_pred CccCCCCCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEcCCChhhhhhcCccCCCC
Q 014951 1 MRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLY 80 (415)
Q Consensus 1 L~~~Gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~ 80 (415)
|++.|+++||+|+++++|+++++++++||+++|++++|+++.++.+++..+++.++++++|++.+....+....... ..
T Consensus 42 l~~~g~~~~~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~-~~ 120 (515)
T TIGR03098 42 LRGLGLARGERVAIYLDKRLETVTAMFGAALAGGVFVPINPLLKAEQVAHILADCNVRLLVTSSERLDLLHPALPGC-HD 120 (515)
T ss_pred HHHcCCCCCCEEEEEcCCCHHHHHHHHHHHhcCEEEEeCCCCCCHHHHHHHHHcCCCeEEEEccchhhhhHhhhhcc-cc
Confidence 35679999999999999999999999999999999999999999999999999999999999987665554433222 34
Q ss_pred ccEEEEecCCCchhhHHhhhcCceeecHHHHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEeecHHHHHHhhhhh
Q 014951 81 LKTIVSFANVSSSQKKEAEELGVSCFSWEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVD 160 (415)
Q Consensus 81 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~~~~ 160 (415)
...++.++....... .......|+++...... ....+...+++++++|||||||.||+|.+||.++...+....
T Consensus 121 ~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~TSGTTG~PK~v~~t~~~l~~~~~~~~ 194 (515)
T TIGR03098 121 LRTLILVGEPAHASE-----GGGESPSWPKLLALGDA-DPPHPVIDSDMAAILYTSGSTGRPKGVVLSHRNLVAGAQSVA 194 (515)
T ss_pred cceEEEecCcccccC-----CccccccHHHhhccccc-cccCCCCcCCeEEEEECCCCCCCCceEEEecHHHHHHHHHHH
Confidence 445555543321100 11223455555443221 122334568899999999999999999999999998887766
Q ss_pred hhhhhccccCCCCCEEEEeCChhhHHHHHHHHHhhhcCcEEEEeCC-CHHHHHHHHHhhCCeEEEeCcHHHHHHHHHHHH
Q 014951 161 QMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG-DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISN 239 (415)
Q Consensus 161 ~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~vv~~~~-~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~ 239 (415)
..+ .+..+|++++.+|++|.+++..++.++..|+++++.+. ++..+++.++++++|++.++|+++..+.+...
T Consensus 195 ~~~-----~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~- 268 (515)
T TIGR03098 195 TYL-----ENRPDDRLLAVLPLSFDYGFNQLTTAFYVGATVVLHDYLLPRDVLKALEKHGITGLAAVPPLWAQLAQLDW- 268 (515)
T ss_pred HHh-----CCCcccEEEEECchhhHhHHHHHHHHHHcCCEEEEcCCCCHHHHHHHHHHcCCceEecChHHHHHHHhccc-
Confidence 554 67789999999999999999888899999999998876 99999999999999999999999988754100
Q ss_pred hhhcCChhhHHHHHHHHHhhhhccccCCCCCCccchhhHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHHHhc-CCce
Q 014951 240 KISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTS-GAPL 318 (415)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~~G~~~~~~~~~~~~~~~-~~~~ 318 (415)
.. ....++|.++++|+++++++.+.+++.+ +..+
T Consensus 269 -------------------------------------~~--------~~~~~l~~~~~~g~~l~~~~~~~~~~~~~~~~~ 303 (515)
T TIGR03098 269 -------------------------------------PE--------SAAPSLRYLTNSGGAMPRATLSRLRSFLPNARL 303 (515)
T ss_pred -------------------------------------CC--------CCccceEEEEecCCcCCHHHHHHHHHHCCCCeE
Confidence 00 0013899999999999999999999888 6789
Q ss_pred EEeeccCCCCceeeeecCCcccccCcccccccCeEEEEeecCCCCCCCCCCCCCCeEEEecCCccccccCCchhhhhhhc
Q 014951 319 TQGYGLTESCSGCFTSLADVFNMIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVIV 398 (415)
Q Consensus 319 ~~~yG~tE~~~~~~~~~~~~~~~~~~~G~~~~g~~~~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gY~~~~~~~~~~~~ 398 (415)
++.||+||++..............+++|+|+++++++|++ +++.. ++.++.|||+++|+.++.|||++++.+...|.
T Consensus 304 ~~~YG~tE~~~~~~~~~~~~~~~~~~vG~~~~~~~~~i~~-~~~~~--~~~~~~Gel~v~g~~~~~gy~~~~~~~~~~~~ 380 (515)
T TIGR03098 304 FLMYGLTEAFRSTYLPPEEVDRRPDSIGKAIPNAEVLVLR-EDGSE--CAPGEEGELVHRGALVAMGYWNDPEKTAERFR 380 (515)
T ss_pred eeeeccccccceEecccccccCCCCCcceecCCCEEEEEC-CCCCC--CCCCCceEEEEcCchhhccccCCchhhhhhhh
Confidence 9999999987655443333234458999999999999999 66653 45679999999999999999999988876652
Q ss_pred ------------CCceecCceEEEcCCCC
Q 014951 399 ------------DGWFHTGDIGEWQPMEL 415 (415)
Q Consensus 399 ------------~g~~~TGDlg~~d~~G~ 415 (415)
++||+|||+|++|+||+
T Consensus 381 ~~~~~~~~~~~~~~~~~TGD~~~~~~~g~ 409 (515)
T TIGR03098 381 PLPPRPGELHLPELAVWSGDTVRRDEEGF 409 (515)
T ss_pred ccCCccccccccccceeccceEEEcCCce
Confidence 34899999999999985
No 66
>PLN03052 acetate--CoA ligase; Provisional
Probab=100.00 E-value=2.1e-46 Score=375.13 Aligned_cols=357 Identities=16% Similarity=0.148 Sum_probs=259.9
Q ss_pred CccCCCCCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEcCCChh------hhhhcC
Q 014951 1 MRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIP------SILSCL 74 (415)
Q Consensus 1 L~~~Gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~------~~~~~~ 74 (415)
|++.|+++||+|+++++|++|+++++|||+++|++++|++|.++++++.+++++++++++|+++.... ......
T Consensus 225 L~~~Gv~~GdrVai~~pn~~e~via~LA~~~~Gav~vpi~p~~~~~~l~~rl~~~~~k~lit~d~~~~~gk~~~~~~~~~ 304 (728)
T PLN03052 225 LDALGFEKGDAIAIDMPMNVHAVIIYLAIILAGCVVVSIADSFAPSEIATRLKISKAKAIFTQDVIVRGGKSIPLYSRVV 304 (728)
T ss_pred HHHcCCCCCCEEEEEeCCCHHHHHHHHHHHHcCCEEEeeCCCCCHHHHHHHHHhcCceEEEEcCccccCCcccchHHHHH
Confidence 46789999999999999999999999999999999999999999999999999999999999875421 111111
Q ss_pred ccCCCCccEEEEecCCCchhhHHhhhcCceeecHHHHHhcCCC---C--CCCCCCCCCCeEEEEecCCCCCCCceEEeec
Q 014951 75 PRCCLYLKTIVSFANVSSSQKKEAEELGVSCFSWEEFLQLGTL---D--CELPPKKKTNISTIMYTSGTTGEPKGVVLTN 149 (415)
Q Consensus 75 ~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~--~~~~~~~~~~~~~i~~TSGtTG~pK~v~~th 149 (415)
... . ..++.+......... ........|++++..... . ........+++++|+|||||||.||||+++|
T Consensus 305 ~~~-~--~~~iv~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~a~IlyTSGTTG~PKgVv~sh 378 (728)
T PLN03052 305 EAK-A--PKAIVLPADGKSVRV---KLREGDMSWDDFLARANGLRRPDEYKAVEQPVEAFTNILFSSGTTGEPKAIPWTQ 378 (728)
T ss_pred Hhc-C--CcEEEEeCCCCcccc---ccccCCccHHHHHhccccccccccccccccCCCCcEEEEecCCCCCCCceEEECc
Confidence 000 1 123333221100000 000112456666543210 1 1111235689999999999999999999999
Q ss_pred HHHHHHhhhhhhhhhhccccCCCCCEEEEeCChhhHHHHHHHHHhhhcCcEEEEeCC--CHHHHHHHHHhhCCeEEEeCc
Q 014951 150 QAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTMFSGVP 227 (415)
Q Consensus 150 ~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~vv~~~~--~~~~~~~~i~~~~~t~~~~~P 227 (415)
.+++.........+ .+.++|++++.+|++|.++...++.++..|+++++.++ ++..+++.++++++|++.++|
T Consensus 379 ~~~l~~~~~~~~~~-----~l~~~d~~~~~~~l~w~~g~~~v~~~L~~Gat~vl~~g~p~~~~~~~~i~~~~vT~l~~~P 453 (728)
T PLN03052 379 LTPLRAAADAWAHL-----DIRKGDIVCWPTNLGWMMGPWLVYASLLNGATLALYNGSPLGRGFAKFVQDAKVTMLGTVP 453 (728)
T ss_pred hHHHHHHHHHHHhc-----CCCCCcEEEECCCcHHHhHHHHHHHHHHhCCEEEEeCCCCCCChHHHHHHHHCCCEEEECH
Confidence 99876655433323 67789999999999999998777889999999999875 567899999999999999999
Q ss_pred HHHHHHHHHHHHhhhcCChhhHHHHHHHHHhhhhccccCCCCCCccchhhHHHHHHHHHHhCCceeEEEEecCCCCHHHH
Q 014951 228 RVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVE 307 (415)
Q Consensus 228 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~~G~~~~~~~~ 307 (415)
++++.+.+. ......++ ++||.++++||+++++..
T Consensus 454 t~l~~l~~~-------------------------------------~~~~~~dl--------ssLr~i~s~Ge~l~~~~~ 488 (728)
T PLN03052 454 SIVKTWKNT-------------------------------------NCMAGLDW--------SSIRCFGSTGEASSVDDY 488 (728)
T ss_pred HHHHHHHhc-------------------------------------CCcccCCh--------hheeEEEecCCCCCHHHH
Confidence 999887541 00011122 389999999999999998
Q ss_pred HHHHHhcC-CceEEeeccCCCCceeeeecCCcccccCcccccccCeEEEEeecCCCCCCCCCCCCCCeEEEecC--Cccc
Q 014951 308 EFLRVTSG-APLTQGYGLTESCSGCFTSLADVFNMIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGN--TLFS 384 (415)
Q Consensus 308 ~~~~~~~~-~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~G~~~~g~~~~i~~~~~~~~~~~~~~~~Gel~v~~~--~~~~ 384 (415)
.++.+.++ .++.+.||+||+++.+....+......+++|.|.+|++++|+| +++++++.+..+.|||+++++ ....
T Consensus 489 ~~~~~~~~~~~i~~~yG~TE~~~~~~~~~~~~~~~~g~~g~p~~g~~v~v~d-~~g~~v~~g~~~~GEL~v~~~~~~~~~ 567 (728)
T PLN03052 489 LWLMSRAGYKPIIEYCGGTELGGGFVTGSLLQPQAFAAFSTPAMGCKLFILD-DSGNPYPDDAPCTGELALFPLMFGASS 567 (728)
T ss_pred HHHHHhcCCCCeEeeccChhhCcccccCCCCCCCCCCccccCCCCceEEEEC-CCCCCCCCCCCceEEEEEeCCCCCCCc
Confidence 88887766 5799999999997654433222223358899999999999999 888766543224699999865 3345
Q ss_pred cccCCchhhhhhhc-----CC--ceecCceEEEcCCCC
Q 014951 385 GYYKRPDLTEEVIV-----DG--WFHTGDIGEWQPMEL 415 (415)
Q Consensus 385 gY~~~~~~~~~~~~-----~g--~~~TGDlg~~d~~G~ 415 (415)
+|++++. ...-|. .| ||+|||++++|+||+
T Consensus 568 ~~~~~~~-~~~yf~~~p~~~g~~~~~tGDl~~~d~dG~ 604 (728)
T PLN03052 568 TLLNADH-YKVYFKGMPVFNGKILRRHGDIFERTSGGY 604 (728)
T ss_pred cccCchh-hhhhhhcCCCCCCCEEEecCceEEECCCCe
Confidence 6776542 222221 13 999999999999996
No 67
>TIGR02262 benz_CoA_lig benzoate-CoA ligase family. Characterized members of this protein family include benzoate-CoA ligase, 4-hydroxybenzoate-CoA ligase, 2-aminobenzoate-CoA ligase, etc. Members are related to fatty acid and acetate CoA ligases.
Probab=100.00 E-value=3.7e-46 Score=363.37 Aligned_cols=348 Identities=21% Similarity=0.266 Sum_probs=277.7
Q ss_pred ccCCCCCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEcCCChhhhhhcCccCCCCc
Q 014951 2 RSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYL 81 (415)
Q Consensus 2 ~~~Gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~ 81 (415)
.+.|+++||+|+++++|+++++++++||+++|++++|+++.++.+++.++++.++++++|++.+..+.+.+..... +..
T Consensus 48 ~~~g~~~g~~v~l~~~~~~~~~~~~~a~~~~G~~~v~l~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~~ 126 (508)
T TIGR02262 48 RRLGVKREERVLLLMLDGVDFPIAFLGAIRAGIVPVALNTLLTADDYAYMLEDSRARVVFVSGELLPVIKAALGKS-PHL 126 (508)
T ss_pred HHcCCCCCCEEEEECCCCHHHHHHHHHHHHcCcEEeeccCCCCHHHHHHHHHhcCCeEEEEchhhHHHHHHHHhcC-CCc
Confidence 4679999999999999999999999999999999999999999999999999999999999987766554433222 334
Q ss_pred cEEEEecCCCchhhHHhhhcCceeecHHHHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEeecHHHHHHhhh-hh
Q 014951 82 KTIVSFANVSSSQKKEAEELGVSCFSWEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLS-VD 160 (415)
Q Consensus 82 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~~-~~ 160 (415)
+.++..+.... ....+.+...............++++++++|||||||.||+|+++|+++...+.. ..
T Consensus 127 ~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~~~~~~~~~~~ 195 (508)
T TIGR02262 127 EHRVVVGRPEA-----------GEVQLAELLATESEQFKPAATQADDPAFWLYSSGSTGMPKGVVHTHSNPYWTAELYAR 195 (508)
T ss_pred cEEEEeCCCCc-----------ccccHHHHhhcCCCccCCCCCCCCCcEEEEeCCCCCCCCcEEEEechhHHHHHHHHhH
Confidence 45555433210 1123444433222222223455789999999999999999999999999887755 22
Q ss_pred hhhhhccccCCCCCEEEEeCChhhHHHHHH-HHHhhhcCcEEEEeCC--CHHHHHHHHHhhCCeEEEeCcHHHHHHHHHH
Q 014951 161 QMFVVTGKVCSEEDTYFSFLPLAHIYDQII-ETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTMFSGVPRVYDRIYTGI 237 (415)
Q Consensus 161 ~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~-~~~~l~~G~~vv~~~~--~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~ 237 (415)
..+ .++.+|+++..+|++|.+++.. ++.++..|+++++.+. ++..+++.|++++||.+.++|.++..+++..
T Consensus 196 ~~~-----~~~~~d~~l~~~p~~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~~~~~~ 270 (508)
T TIGR02262 196 NTL-----GIREDDVVFSAAKLFFAYGLGNALTFPMSVGATTVLMGERPTPDAVFDRLRRHQPTIFYGVPTLYAAMLADP 270 (508)
T ss_pred Hhc-----CCCCCCEEEEcCchHHHHHHHHHHHHHHHcCceEEEeCCCCCHHHHHHHHHHHCCcEEecchHHHHHHhcCc
Confidence 233 6788999999999999999865 6677889999988764 7999999999999999999999887764310
Q ss_pred HHhhhcCChhhHHHHHHHHHhhhhccccCCCCCCccchhhHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHHHhcCCc
Q 014951 238 SNKISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAP 317 (415)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~~G~~~~~~~~~~~~~~~~~~ 317 (415)
. .. .....++|.+++||+++++++.+.|.+.++.+
T Consensus 271 ~-------------------------------------~~--------~~~~~~l~~~~~~G~~l~~~~~~~~~~~~~~~ 305 (508)
T TIGR02262 271 N-------------------------------------LP--------AEDQVRLRLCTSAGEALPAEVGQRWQARFGVD 305 (508)
T ss_pred c-------------------------------------cc--------ccccccceeEEEcCCCCCHHHHHHHHHHhCCc
Confidence 0 00 00014799999999999999999999999999
Q ss_pred eEEeeccCCCCceeeeecCCcccccCcccccccCeEEEEeecCCCCCCCCCCCCCCeEEEecCCccccccCCchhhhhhh
Q 014951 318 LTQGYGLTESCSGCFTSLADVFNMIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVI 397 (415)
Q Consensus 318 ~~~~yG~tE~~~~~~~~~~~~~~~~~~~G~~~~g~~~~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gY~~~~~~~~~~~ 397 (415)
+++.||+||++.++.....+.. ..+++|+|++|++++|+| +++. +++.|+.|||+++|+.++.||+++++.+...|
T Consensus 306 v~~~YG~tE~~~~~~~~~~~~~-~~~~~G~~~~g~~v~i~d-~~~~--~~~~g~~Gel~i~~~~~~~gY~~~~~~~~~~~ 381 (508)
T TIGR02262 306 IVDGIGSTEMLHIFLSNLPGDV-RYGTSGKPVPGYRLRLVG-DGGQ--DVAAGEPGELLISGPSSATMYWNNRAKTRDTF 381 (508)
T ss_pred hhhCccccccCceeecCCccCC-CCCCcCCCCCCcEEEEEC-CCCC--CCCCCCeeEEEEecCccccccCCCHHHhHhhh
Confidence 9999999999876554433322 237899999999999999 7664 44566999999999999999999999999999
Q ss_pred cCCceecCceEEEcCCCC
Q 014951 398 VDGWFHTGDIGEWQPMEL 415 (415)
Q Consensus 398 ~~g~~~TGDlg~~d~~G~ 415 (415)
.++||+|||+++++++|+
T Consensus 382 ~~~~~~TGD~~~~~~~g~ 399 (508)
T TIGR02262 382 QGEWTRSGDKYVRNDDGS 399 (508)
T ss_pred hcCceeccceEEEcCCcc
Confidence 999999999999999874
No 68
>PRK08008 caiC putative crotonobetaine/carnitine-CoA ligase; Validated
Probab=100.00 E-value=3.5e-46 Score=364.43 Aligned_cols=353 Identities=22% Similarity=0.328 Sum_probs=273.9
Q ss_pred CccCCCCCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEcCCChhhhhhcCccCCCC
Q 014951 1 MRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLY 80 (415)
Q Consensus 1 L~~~Gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~ 80 (415)
|.+.|+++||+|+++++|+++++++++||+++|++++++++..+.+++.+++++++++.+|++.+..+.+.+........
T Consensus 54 L~~~g~~~~~~v~i~~~n~~~~~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 133 (517)
T PRK08008 54 FYSLGIRKGDKVALHLDNCPEFIFCWFGLAKIGAIMVPINARLLREESAWILQNSQASLLVTSAQFYPMYRQIQQEDATP 133 (517)
T ss_pred HHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCeEEEEcCcccCHHHHHHHHHhcCceEEEEecchhHHHHHHHhhcccc
Confidence 34679999999999999999999999999999999999999999999999999999999999998776655443332234
Q ss_pred ccEEEEecCCCchhhHHhhhcCceeecHHHHHhcCC-CCCCCCCCCCCCeEEEEecCCCCCCCceEEeecHHHHHHhhhh
Q 014951 81 LKTIVSFANVSSSQKKEAEELGVSCFSWEEFLQLGT-LDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSV 159 (415)
Q Consensus 81 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~~~ 159 (415)
.+.++..+..... ......+++...... ......+..++++++++|||||||.||+|++||.++.......
T Consensus 134 ~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~t~~~l~~~~~~~ 205 (517)
T PRK08008 134 LRHICLTRVALPA--------DDGVSSFTQLKAQQPATLCYAPPLSTDDTAEILFTSGTTSRPKGVVITHYNLRFAGYYS 205 (517)
T ss_pred CcEEEEecCCCcc--------cccccCHHHHhccCCccccccCCCCCCCeEEEEECCCCCCCCcEEEEehHHHHHHHHHH
Confidence 4555554432110 012334554443221 1112234467899999999999999999999999998654322
Q ss_pred hhhhhhccccCCCCCEEEEeCChhhHHHHHH-HHHhhhcCcEEEEeCC-CHHHHHHHHHhhCCeEEEeCcHHHHHHHHHH
Q 014951 160 DQMFVVTGKVCSEEDTYFSFLPLAHIYDQII-ETHCIHKGCSIGFWRG-DVRYLMEDIQELKPTMFSGVPRVYDRIYTGI 237 (415)
Q Consensus 160 ~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~-~~~~l~~G~~vv~~~~-~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~ 237 (415)
... ..+..++++++.+|++|..+... ++.++..|+++++.+. ++..+++.++++++|++.++|++++.+....
T Consensus 206 ~~~-----~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~ 280 (517)
T PRK08008 206 AWQ-----CALRDDDVYLTVMPAFHIDCQCTAAMAAFSAGATFVLLEKYSARAFWGQVCKYRATITECIPMMIRTLMVQP 280 (517)
T ss_pred hhh-----cCCCCCCeEEEecCcHHHHHHHHHHHHHHhcCcEEEEccccCHHHHHHHHHHcCCcEEechHHHHHHHHhCC
Confidence 111 14678899999999999877664 6778999999999876 8999999999999999999999998765310
Q ss_pred HHhhhcCChhhHHHHHHHHHhhhhccccCCCCCCccchhhHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHHHhcCCc
Q 014951 238 SNKISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAP 317 (415)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~~G~~~~~~~~~~~~~~~~~~ 317 (415)
. ..... ..+++.+.++ .+++++....+.+.++.+
T Consensus 281 ~----------------------------------~~~~~-----------~~~l~~~~~~-~~~~~~~~~~~~~~~~~~ 314 (517)
T PRK08008 281 P----------------------------------SANDR-----------QHCLREVMFY-LNLSDQEKDAFEERFGVR 314 (517)
T ss_pred C----------------------------------ccccc-----------cccceeeEEe-cCCCHHHHHHHHHHhCCe
Confidence 0 00000 0256766665 478888888888889999
Q ss_pred eEEeeccCCCCceeeeecCCcccccCcccccccCeEEEEeecCCCCCCCCCCCCCCeEEEec---CCccccccCCchhhh
Q 014951 318 LTQGYGLTESCSGCFTSLADVFNMIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRG---NTLFSGYYKRPDLTE 394 (415)
Q Consensus 318 ~~~~yG~tE~~~~~~~~~~~~~~~~~~~G~~~~g~~~~i~~~~~~~~~~~~~~~~Gel~v~~---~~~~~gY~~~~~~~~ 394 (415)
+++.||+||++..+...........+++|.|+++++++|+| +++. +++.|+.|||+++| ++++.|||++++.+.
T Consensus 315 ~~~~YG~tE~~~~~~~~~~~~~~~~~~~G~~~~g~~~~i~d-~~~~--~~~~g~~Gel~v~g~~~~~~~~gy~~~~~~~~ 391 (517)
T PRK08008 315 LLTSYGMTETIVGIIGDRPGDKRRWPSIGRPGFCYEAEIRD-DHNR--PLPAGEIGEICIKGVPGKTIFKEYYLDPKATA 391 (517)
T ss_pred EEeeccccccccccccCCccccccCCccccCCCCcEEEEEC-CCCC--CCCCCCcceEEEeCCCCcchhhhHhCChHHHh
Confidence 99999999998765544433333457899999999999999 6664 44567999999997 689999999999999
Q ss_pred hhh-cCCceecCceEEEcCCCC
Q 014951 395 EVI-VDGWFHTGDIGEWQPMEL 415 (415)
Q Consensus 395 ~~~-~~g~~~TGDlg~~d~~G~ 415 (415)
+.| .+|||+|||+|++|+||+
T Consensus 392 ~~~~~~g~~~TGDl~~~~~~g~ 413 (517)
T PRK08008 392 KVLEADGWLHTGDTGYVDEEGF 413 (517)
T ss_pred hcccCCCCeeccceEEECCCCc
Confidence 998 689999999999999985
No 69
>PRK12492 long-chain-fatty-acid--CoA ligase; Provisional
Probab=100.00 E-value=2.3e-46 Score=368.75 Aligned_cols=362 Identities=23% Similarity=0.363 Sum_probs=268.4
Q ss_pred CCCCCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEcCCChhhhhhcCccCCCCccE
Q 014951 4 RGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKT 83 (415)
Q Consensus 4 ~Gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~ 83 (415)
.|+++||+|+++++|+++++++++||+++|++++++++..+.+++.+++++++++++|+++...+.+....... ....
T Consensus 70 ~gi~~gd~V~i~~~n~~e~~~~~la~~~~G~v~v~~~~~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~~~~~~--~~~~ 147 (562)
T PRK12492 70 TDLVPGDRIAVQMPNVLQYPIAVFGALRAGLIVVNTNPLYTAREMRHQFKDSGARALVYLNMFGKLVQEVLPDT--GIEY 147 (562)
T ss_pred cCCCCCCEEEEECCCCHHHHHHHHHHHHcCeEEeccCccCCHHHHHHHHhccCceEEEeccccchHHHHhhhcc--CceE
Confidence 49999999999999999999999999999999999999999999999999999999999876544433222110 1111
Q ss_pred EEEec--CCCch------------hhHHhhhc-CceeecHHHHHhcCC-CCCCCCCCCCCCeEEEEecCCCCCCCceEEe
Q 014951 84 IVSFA--NVSSS------------QKKEAEEL-GVSCFSWEEFLQLGT-LDCELPPKKKTNISTIMYTSGTTGEPKGVVL 147 (415)
Q Consensus 84 v~~~~--~~~~~------------~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~ 147 (415)
++... +.... ........ ......|++....+. ......+...+++++|+|||||||.||+|++
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~ 227 (562)
T PRK12492 148 LIEAKMGDLLPAAKGWLVNTVVDKVKKMVPAYHLPQAVPFKQALRQGRGLSLKPVPVGLDDIAVLQYTGGTTGLAKGAML 227 (562)
T ss_pred EEeechhhccccccchhcccccccccccccccCCcccccHHHHHhccCCCCCCCCCCCcCCeEEEEeCCCCCCCCceEEE
Confidence 11100 00000 00000000 001234555543321 1112234567899999999999999999999
Q ss_pred ecHHHHHHhhhhhhhhhhcc----ccCCC-CCEEEEeCChhhHHHHHH-HHHhhhcCcEEEEeCC--CHHHHHHHHHhhC
Q 014951 148 TNQAIVAEVLSVDQMFVVTG----KVCSE-EDTYFSFLPLAHIYDQII-ETHCIHKGCSIGFWRG--DVRYLMEDIQELK 219 (415)
Q Consensus 148 th~~l~~~~~~~~~~~~~~~----~~~~~-~d~~l~~~p~~~~~~~~~-~~~~l~~G~~vv~~~~--~~~~~~~~i~~~~ 219 (415)
+|+++..........+.... ..... .+++++.+|++|.+++.. ++..+..|+.+++... ++..+++.+++++
T Consensus 228 s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~ 307 (562)
T PRK12492 228 THGNLVANMLQVRACLSQLGPDGQPLMKEGQEVMIAPLPLYHIYAFTANCMCMMVSGNHNVLITNPRDIPGFIKELGKWR 307 (562)
T ss_pred echhHHHHHHHHHHHHhcccccccccccCCCeEEEEecchHHHHHHHHHHHHHhhcCceEEEecCCcCHHHHHHHHHHhC
Confidence 99999877665544331100 00222 357789999999999875 4556778887766542 8899999999999
Q ss_pred CeEEEeCcHHHHHHHHHHHHhhhcCChhhHHHHHHHHHhhhhccccCCCCCCccchhhHHHHHHHHHHhCCceeEEEEec
Q 014951 220 PTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGA 299 (415)
Q Consensus 220 ~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~~G 299 (415)
+|++.++|+++..+++... ....++ +++|.+++||
T Consensus 308 ~t~~~~~p~~~~~l~~~~~-------------------------------------~~~~~~--------~~lr~~~~gG 342 (562)
T PRK12492 308 FSALLGLNTLFVALMDHPG-------------------------------------FKDLDF--------SALKLTNSGG 342 (562)
T ss_pred CceeeCcHHHHHHHHhCcC-------------------------------------cccccc--------cceeEEEecc
Confidence 9999999999988754110 001111 3799999999
Q ss_pred CCCCHHHHHHHHHhcCCceEEeeccCCCCceeeeecCCcccccCcccccccCeEEEEeecCCCCCCCCCCCCCCeEEEec
Q 014951 300 APLPIHVEEFLRVTSGAPLTQGYGLTESCSGCFTSLADVFNMIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRG 379 (415)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~G~~~~g~~~~i~~~~~~~~~~~~~~~~Gel~v~~ 379 (415)
+++++++.+.+.+.+++++++.||+||++.++...........+++|+|+++++++|+| +++.. ++.|+.|||+++|
T Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~G~p~~~~~v~ivd-~~~~~--~~~g~~Gel~v~g 419 (562)
T PRK12492 343 TALVKATAERWEQLTGCTIVEGYGLTETSPVASTNPYGELARLGTVGIPVPGTALKVID-DDGNE--LPLGERGELCIKG 419 (562)
T ss_pred ccCCHHHHHHHHHHhCCceeeccCccccCceeeecCCcccccCCccceecCCCEEEEEC-CCCCC--CCCCCceEEEEeC
Confidence 99999999999988999999999999998876655433333457899999999999999 76654 4567999999999
Q ss_pred CCccccccCCchhhhhhh-cCCceecCceEEEcCCCC
Q 014951 380 NTLFSGYYKRPDLTEEVI-VDGWFHTGDIGEWQPMEL 415 (415)
Q Consensus 380 ~~~~~gY~~~~~~~~~~~-~~g~~~TGDlg~~d~~G~ 415 (415)
+.++.|||++++.+.+.| .+|||+|||+|++|++|+
T Consensus 420 ~~~~~gY~~~~~~t~~~~~~~g~~~TGD~g~~~~~G~ 456 (562)
T PRK12492 420 PQVMKGYWQQPEATAEALDAEGWFKTGDIAVIDPDGF 456 (562)
T ss_pred CccccccccCchhhhhcccCCCceecCcEEEECCCCe
Confidence 999999999999999888 589999999999999984
No 70
>PRK07769 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=5.1e-47 Score=378.00 Aligned_cols=341 Identities=19% Similarity=0.223 Sum_probs=256.3
Q ss_pred CCCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEec-CCCCC--HHHHHHHHHhcCceEEEEcCCChhhhhhcCccCC-CCc
Q 014951 6 VNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPL-YDTLG--ANAVEFIINHAEVSIAFVQENKIPSILSCLPRCC-LYL 81 (415)
Q Consensus 6 v~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l-~~~~~--~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~-~~~ 81 (415)
+++||+|+++++|++++++++|||+++|++++|+ ++..+ .+++.+++++++++++|++.+..+.+........ ...
T Consensus 76 ~~~gd~V~i~~~n~~e~~~~~lA~~~~G~v~vpl~~~~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~ 155 (631)
T PRK07769 76 TKPGDRVAILAPQNLDYLIAFFGALYAGRIAVPLFDPAEPGHVGRLHAVLDDCTPSAILTTTDSAEGVRKFFRARPAKER 155 (631)
T ss_pred cCCCCEEEEEcCCChHHHHHHHHHHHcCCEEEeeCCCCccchHHHHHHHHHhCCCCEEEEChHHHHHHHHHHhhcccccc
Confidence 7999999999999999999999999999999999 55554 6889999999999999999876554433221110 011
Q ss_pred cEEEEecCCCchhhHHhhhcCceeecHHHHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEeecHHHHHHhhhhhh
Q 014951 82 KTIVSFANVSSSQKKEAEELGVSCFSWEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQ 161 (415)
Q Consensus 82 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~~~~~ 161 (415)
..++.++.... .. ..........++++++|+|||||||.||||++||+++..++.....
T Consensus 156 ~~~~~~~~~~~------------------~~---~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~ 214 (631)
T PRK07769 156 PRVIAVDAVPD------------------EV---GATWVPPEANEDTIAYLQYTSGSTRIPAGVQITHLNLPTNVLQVID 214 (631)
T ss_pred ceEEEcccccc------------------cc---ccccCCCCCCCCCeEEEEeCCCCCCCCcEEEEcHHHHHHHHHHHHH
Confidence 22333221100 00 0011112346789999999999999999999999999988776655
Q ss_pred hhhhccccCCCCCEEEEeCChhhHHHHHHHHHhhhcCcEEEEeCC-----CHHHHHHHHHhhCC---eEEEeCcHHHHHH
Q 014951 162 MFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG-----DVRYLMEDIQELKP---TMFSGVPRVYDRI 233 (415)
Q Consensus 162 ~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~vv~~~~-----~~~~~~~~i~~~~~---t~~~~~P~~~~~l 233 (415)
.+ .+..+|++++++|++|.+++...+.+++.|+++++.+. ++..+++.++++++ +++.++|.++..+
T Consensus 215 ~~-----~~~~~d~~l~~~Pl~h~~gl~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~p~~~~~l 289 (631)
T PRK07769 215 AL-----EGQEGDRGVSWLPFFHDMGLITVLLPALLGHYITFMSPAAFVRRPGRWIRELARKPGGTGGTFSAAPNFAFEH 289 (631)
T ss_pred Hc-----CCCCcceEEEeCCCcCchhhHHHHHHHhhCCeEEEEChHHHHhCHHHHHHHHHhhccccCceEeeCCchHHHH
Confidence 44 67789999999999999999877777888999988742 78899999999886 7899999987765
Q ss_pred HHHHHHhhhcCChhhHHHHHHHHHhhhhccccCCCCCCccchhhHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHHHh
Q 014951 234 YTGISNKISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVT 313 (415)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~~G~~~~~~~~~~~~~~ 313 (415)
..... ... ......++ +++|.+++||+++++++.++|.+.
T Consensus 290 ~~~~~--~~~------------------------------~~~~~~~l--------~~lr~~~~gg~~l~~~~~~~~~~~ 329 (631)
T PRK07769 290 AAARG--LPK------------------------------DGEPPLDL--------SNVKGLLNGSEPVSPASMRKFNEA 329 (631)
T ss_pred HHhhc--cch------------------------------hcccCcch--------hheeeEEeccCCCCHHHHHHHHHH
Confidence 43100 000 00000112 389999999999999999999887
Q ss_pred cC------CceEEeeccCCCCceeeeecCCcc--------------------------cccCcccccccCeEEEEeecCC
Q 014951 314 SG------APLTQGYGLTESCSGCFTSLADVF--------------------------NMIGTVGVPMTTVEARLESVPE 361 (415)
Q Consensus 314 ~~------~~~~~~yG~tE~~~~~~~~~~~~~--------------------------~~~~~~G~~~~g~~~~i~~~~~ 361 (415)
++ ..+++.||+||++..+.....+.. ....++|+|.++++++|+|.++
T Consensus 330 ~~~~g~~~~~i~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~G~~~~~~~~~ivd~~~ 409 (631)
T PRK07769 330 FAPYGLPPTAIKPSYGMAEATLFVSTTPMDEEPTVIYVDRDELNAGRFVEVPADAPNAVAQVSAGKVGVSEWAVIVDPET 409 (631)
T ss_pred HhhcCCChhhcccccchhhheeEEeccCCCCCceEEEEcHHHHhCCCeEecCCCCCCceeEEeCCCcCCCcEEEEEcCCC
Confidence 73 359999999998766554322110 0125789999999999998334
Q ss_pred CCCCCCCCCCCCeEEEecCCccccccCCchhhhhhhc------------------CCceecCceEEEcCCCC
Q 014951 362 MGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVIV------------------DGWFHTGDIGEWQPMEL 415 (415)
Q Consensus 362 ~~~~~~~~~~~Gel~v~~~~~~~gY~~~~~~~~~~~~------------------~g~~~TGDlg~~d~~G~ 415 (415)
+. +++.|+.|||+++||+++.|||++++.|.++|. +|||+|||+|+++ ||+
T Consensus 410 g~--~~~~ge~GEl~v~gp~v~~GY~~~~~~t~~~f~~~~~~~~~~~~~~~~~~~~gw~~TGDlg~~~-dG~ 478 (631)
T PRK07769 410 AS--ELPDGQIGEIWLHGNNIGTGYWGKPEETAATFQNILKSRLSESHAEGAPDDALWVRTGDYGVYF-DGE 478 (631)
T ss_pred Cc--CCCCCCEEEEEecCCCccccccCChhHHHHHHhhhcccccccccccCcccCCCeeeccccccEE-CCE
Confidence 43 455679999999999999999999999998883 3899999999995 774
No 71
>PRK07787 acyl-CoA synthetase; Validated
Probab=100.00 E-value=3.2e-46 Score=360.15 Aligned_cols=322 Identities=26% Similarity=0.362 Sum_probs=260.8
Q ss_pred CCCCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEcCCChhhhhhcCccCCCCccEE
Q 014951 5 GVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTI 84 (415)
Q Consensus 5 Gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~v 84 (415)
.++++|+|+++++|+++++++++||+++|++++|+++..+.+++..+++.++++.++++.+... ......
T Consensus 41 ~L~~~~~V~l~~~~~~~~~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~il~~~~~~~----------~~~~~~ 110 (471)
T PRK07787 41 RVAGARRVAVLATPTLATVLAVVGALIAGVPVVPVPPDSGVAERRHILADSGAQAWLGPAPDDP----------AGLPHV 110 (471)
T ss_pred HhccCCEEEEECCCCHHHHHHHHHHHhcCcEEeecCCCCChHHHHHHHHhcCCCEEEecCCccc----------ccccce
Confidence 4668999999999999999999999999999999999999999999999999999999864110 000000
Q ss_pred EEecCCCchhhHHhhhcCceeecHHHHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEeecHHHHHHhhhhhhhhh
Q 014951 85 VSFANVSSSQKKEAEELGVSCFSWEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFV 164 (415)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~~~~~~~~ 164 (415)
.+... ... ........++++++++|||||||.||+|.++|.++...+......+
T Consensus 111 -~~~~~--------------~~~----------~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~t~~~l~~~~~~~~~~~- 164 (471)
T PRK07787 111 -PVRLH--------------ARS----------WHRYPEPDPDAPALIVYTSGTTGPPKGVVLSRRAIAADLDALAEAW- 164 (471)
T ss_pred -eeecc--------------ccc----------cccCCCCCCCceEEEEECCCCCCCCCEEEEeHHHHHHHHHHHHHhc-
Confidence 00000 000 0011224578999999999999999999999999999887766555
Q ss_pred hccccCCCCCEEEEeCChhhHHHHHH-HHHhhhcCcEEEEeCC-CHHHHHHHHHhhCCeEEEeCcHHHHHHHHHHHHhhh
Q 014951 165 VTGKVCSEEDTYFSFLPLAHIYDQII-ETHCIHKGCSIGFWRG-DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKIS 242 (415)
Q Consensus 165 ~~~~~~~~~d~~l~~~p~~~~~~~~~-~~~~l~~G~~vv~~~~-~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~ 242 (415)
.+..+|++++.+|++|..++.. ++.+++.|+++++.+. ++..+++.|+ +++|++.++|+++..+.+....
T Consensus 165 ----~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~-~~~t~~~~~P~~~~~l~~~~~~--- 236 (471)
T PRK07787 165 ----QWTADDVLVHGLPLFHVHGLVLGVLGPLRIGNRFVHTGRPTPEAYAQALS-EGGTLYFGVPTVWSRIAADPEA--- 236 (471)
T ss_pred ----CCCccceeEeccCCeeechhHHHHHHHHhcCCEEEecCCCCHHHHHHHHh-hCceEEEcchHHHHHHHhCccc---
Confidence 6778899999999999999875 7788999999998865 9999999999 9999999999999887641000
Q ss_pred cCChhhHHHHHHHHHhhhhccccCCCCCCccchhhHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHHHhcCCceEEee
Q 014951 243 SGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQGY 322 (415)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~~G~~~~~~~~~~~~~~~~~~~~~~y 322 (415)
... ..++|.+++||+++++++.+++.+.++.++++.|
T Consensus 237 -----------------------------------~~~--------l~~l~~~~~gg~~~~~~~~~~~~~~~~~~~~~~Y 273 (471)
T PRK07787 237 -----------------------------------ARA--------LRGARLLVSGSAALPVPVFDRLAALTGHRPVERY 273 (471)
T ss_pred -----------------------------------ccc--------ccceeEEEECCCCCCHHHHHHHHHHcCCCeeccc
Confidence 000 1379999999999999999999998999999999
Q ss_pred ccCCCCceeeeecCCcccccCcccccccCeEEEEeecCCCCCCCCCCCCCCeEEEecCCccccccCCchhhhhhh-cCCc
Q 014951 323 GLTESCSGCFTSLADVFNMIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVI-VDGW 401 (415)
Q Consensus 323 G~tE~~~~~~~~~~~~~~~~~~~G~~~~g~~~~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gY~~~~~~~~~~~-~~g~ 401 (415)
|+||++..+...... ....+++|+|++|++++|+| +++..++...++.|||+++|++++.||+++++.+.+.| .+||
T Consensus 274 G~tE~~~~~~~~~~~-~~~~~~vG~~~~g~~~~i~d-~~~~~~~~~~~~~Gei~v~g~~~~~gy~~~~~~t~~~~~~~~~ 351 (471)
T PRK07787 274 GMTETLITLSTRADG-ERRPGWVGLPLAGVETRLVD-EDGGPVPHDGETVGELQVRGPTLFDGYLNRPDATAAAFTADGW 351 (471)
T ss_pred CccccCcceecCCCC-cccCCcccccCCCcEEEEEC-CCCCCCCCCCCCceEEEEECcccchhhcCChhhchhcccCCCc
Confidence 999998654443322 22347899999999999999 77665543223489999999999999999999999988 5899
Q ss_pred eecCceEEEcCCCC
Q 014951 402 FHTGDIGEWQPMEL 415 (415)
Q Consensus 402 ~~TGDlg~~d~~G~ 415 (415)
|+|||+|++|+||+
T Consensus 352 ~~TGDlg~~~~dg~ 365 (471)
T PRK07787 352 FRTGDVAVVDPDGM 365 (471)
T ss_pred eecCceEEEcCCCC
Confidence 99999999999985
No 72
>TIGR01733 AA-adenyl-dom amino acid adenylation domain. This domain is a subset of the AMP-binding domain found in Pfam (pfam00501) which also hits substrate--CoA ligases and luciferases. Sequences scoring in between trusted and noise for this model may be ambiguous as to whether they activate amino acids or other molecules lacking an alpha amino group.
Probab=100.00 E-value=1.2e-45 Score=350.29 Aligned_cols=332 Identities=22% Similarity=0.308 Sum_probs=269.4
Q ss_pred CCCCCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEcCCChhhhhhcCccCCCCccE
Q 014951 4 RGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKT 83 (415)
Q Consensus 4 ~Gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~ 83 (415)
.|+++||+|+++++|+++++++++||+++|++++|+++.++.+++.++++.+++++++++.+....+..... .
T Consensus 20 ~g~~~gd~v~l~~~n~~~~~~~~~a~~~~G~~~v~~~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~-------~ 92 (408)
T TIGR01733 20 GGVGPGDRVAVLLERSAELVVAILAVLKAGAAYVPLDPAYPAERLAFILEDAGARLLLTDSALASRLAGLVL-------P 92 (408)
T ss_pred hCCCCCCEEEEEeCCCHHHHHHHHHHHHhCCEEEEcCCCCCHHHHHHHHHhcCCCEEEEcCchhhhccccCC-------c
Confidence 789999999999999999999999999999999999999999999999999999999999876655432211 1
Q ss_pred EEEecCCCchhhHHhhhcCceeecHHHHHhcC-CCCCCCCCCCCCCeEEEEecCCCCCCCceEEeecHHHHHHhhhhhhh
Q 014951 84 IVSFANVSSSQKKEAEELGVSCFSWEEFLQLG-TLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQM 162 (415)
Q Consensus 84 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~~~~~~ 162 (415)
++.+... +....... ...........+++++++|||||||.||+|.+||+++..........
T Consensus 93 ~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTtG~pK~v~~s~~~~~~~~~~~~~~ 155 (408)
T TIGR01733 93 IILVDPL-----------------ELAALDDAPAPPPPDAPSGPDDLAYVIYTSGSTGRPKGVVVTHRSLVNLLAWLARR 155 (408)
T ss_pred eEEechh-----------------hhhhcccccccccccCCCCCCCcEEEEEcCCCCCCCCEEEeccHHHHHHHHHHHHh
Confidence 1111110 00000000 00111112457899999999999999999999999999988887665
Q ss_pred hhhccccCCCCCEEEEeCChhhHHHHHHHHHhhhcCcEEEEeCC----CHHHHHHHHHhhCCeEEEeCcHHHHHHHHHHH
Q 014951 163 FVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG----DVRYLMEDIQELKPTMFSGVPRVYDRIYTGIS 238 (415)
Q Consensus 163 ~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~vv~~~~----~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~ 238 (415)
+ .+..+|++++..|++|.+++..++.++..|+++++.+. .+..+.+.++++++|.+.++|.+++.+++...
T Consensus 156 ~-----~~~~~~~~~~~~p~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~~p~~~~~l~~~~~ 230 (408)
T TIGR01733 156 Y-----GLDPDDRVLQFASLSFDASVEEIFGTLLAGATLVVPPEDEERDAALLAALIAEHPVTVLNLTPSLLALLAAALP 230 (408)
T ss_pred c-----CCCCCceEEEecCCccchhHHHHHHHHhCCCEEEEcChhhccCHHHHHHHHHHcCceEEEeCHHHHHHHHHhhh
Confidence 5 67789999999999999998889999999999998876 26899999999999999999999999876221
Q ss_pred HhhhcCChhhHHHHHHHHHhhhhccccCCCCCCccchhhHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHHHhcC-Cc
Q 014951 239 NKISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSG-AP 317 (415)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~~G~~~~~~~~~~~~~~~~-~~ 317 (415)
...+++|.+++||+++++++.+++++.++ ..
T Consensus 231 ------------------------------------------------~~~~~l~~v~~~g~~~~~~~~~~~~~~~~~~~ 262 (408)
T TIGR01733 231 ------------------------------------------------PALASLRLVILGGEALTPALVDRWRARGPGAR 262 (408)
T ss_pred ------------------------------------------------hcccCceEEEEeCccCCHHHHHHHHHhCCCcE
Confidence 01148999999999999999999999997 89
Q ss_pred eEEeeccCCCCceeeeecCCccc----ccCcccccccCeEEEEeecCCCCCCCCCCCCCCeEEEecCCccccccCCchhh
Q 014951 318 LTQGYGLTESCSGCFTSLADVFN----MIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLT 393 (415)
Q Consensus 318 ~~~~yG~tE~~~~~~~~~~~~~~----~~~~~G~~~~g~~~~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gY~~~~~~~ 393 (415)
+++.||+||++.++......... +..++|.|+++++++|++ +++ .+++.|+.|||+++|+.++.||+++++.+
T Consensus 263 i~~~YG~tE~g~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~~-~~~--~~~~~g~~Gel~v~~~~~~~gy~~~~~~~ 339 (408)
T TIGR01733 263 LINLYGPTETTVWSTATLVDADDAPRESPVPIGRPLANTRLYVLD-DDL--RPVPVGVVGELYIGGPGVARGYLNRPELT 339 (408)
T ss_pred EEecccCCceEEEEEEEEcCccccCCccccccCcccCCceEEEEC-CCC--CCCCCCCceEEEecCccccccccCChhhh
Confidence 99999999998877533222211 157899999999999999 665 44556799999999999999999999999
Q ss_pred hhhhcC-------C--ceecCceEEEcCCCC
Q 014951 394 EEVIVD-------G--WFHTGDIGEWQPMEL 415 (415)
Q Consensus 394 ~~~~~~-------g--~~~TGDlg~~d~~G~ 415 (415)
.+.|.. | ||+|||+|++|++|+
T Consensus 340 ~~~~~~~~~~~~~~~~~~~TGDl~~~d~~g~ 370 (408)
T TIGR01733 340 AERFVPDPFAGGDGARLYRTGDLVRYLPDGN 370 (408)
T ss_pred hcceeeCCCCCCCCceEEECCceEEEcCCCC
Confidence 888732 2 999999999999985
No 73
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=100.00 E-value=2.2e-46 Score=402.23 Aligned_cols=336 Identities=21% Similarity=0.290 Sum_probs=272.1
Q ss_pred CccCCCCCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEcCCChhhhhhcCccCCCC
Q 014951 1 MRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLY 80 (415)
Q Consensus 1 L~~~Gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~ 80 (415)
|.+.|+++||+|+++++|+++++++++||+++|++++||+|..+.+++.++++.++++++|++.+....+... ..
T Consensus 500 L~~~g~~~g~~V~l~~~~~~~~i~~~la~~~~G~~~vpld~~~p~~~~~~~l~~~~~~~~i~~~~~~~~~~~~-----~~ 574 (1296)
T PRK10252 500 LRERGVKPGDSVAVALPRSVFLTLALHAIVEAGAAWLPLDTGYPDDRLKMMLEDARPSLLITTADQLPRFADV-----PD 574 (1296)
T ss_pred HHHcCCCCCCEEEEEeCCCHHHHHHHHHHHHhCCEEEecCccCHHHHHHHHHHhCCCCEEEECcchhhhcccC-----CC
Confidence 4568999999999999999999999999999999999999999999999999999999999998765443221 00
Q ss_pred ccEEEEecCCCchhhHHhhhcCceeecHHHHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEeecHHHHHHhhhhh
Q 014951 81 LKTIVSFANVSSSQKKEAEELGVSCFSWEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVD 160 (415)
Q Consensus 81 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~~~~ 160 (415)
. .++.++ +..... .........++++++++|||||||.||||+++|+++.+.+.+..
T Consensus 575 ~-~~~~~~---------------------~~~~~~-~~~~~~~~~~~~~a~i~~TSGSTG~PKgV~~~h~~l~~~~~~~~ 631 (1296)
T PRK10252 575 L-TSLCYN---------------------APLAPQ-GAAPLQLSQPHHTAYIIFTSGSTGRPKGVMVGQTAIVNRLLWMQ 631 (1296)
T ss_pred c-eeeecc---------------------cccccc-cCCCCCCCCCCCeEEEEECCCCCCCCCEEEeccHHHHHHHHHHH
Confidence 0 011111 000000 01111233578999999999999999999999999999998877
Q ss_pred hhhhhccccCCCCCEEEEeCChhhHHHHHHHHHhhhcCcEEEEeCC----CHHHHHHHHHhhCCeEEEeCcHHHHHHHHH
Q 014951 161 QMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG----DVRYLMEDIQELKPTMFSGVPRVYDRIYTG 236 (415)
Q Consensus 161 ~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~vv~~~~----~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~ 236 (415)
..+ .+.+.|++++..|++|..++..++.+++.|+++++.+. ++..+++.++++++|++.++|+++..+++.
T Consensus 632 ~~~-----~~~~~d~~l~~~~~~fd~~~~~~~~~l~~G~~l~~~~~~~~~~~~~~~~~i~~~~vt~~~~~Ps~l~~l~~~ 706 (1296)
T PRK10252 632 NHY-----PLTADDVVLQKTPCSFDVSVWEFFWPFIAGAKLVMAEPEAHRDPLAMQQFFAEYGVTTTHFVPSMLAAFVAS 706 (1296)
T ss_pred Hhc-----CCCCCCEEEEeCCcchhhhHHHHHHHHhCCCEEEECChhccCCHHHHHHHHHHcCCeEEEeCHHHHHHHHhh
Confidence 766 78899999999999999998888999999999999763 899999999999999999999999887652
Q ss_pred HHHhhhcCChhhHHHHHHHHHhhhhccccCCCCCCccchhhHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHHHhcCC
Q 014951 237 ISNKISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGA 316 (415)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~~G~~~~~~~~~~~~~~~~~ 316 (415)
...... . ....++|.+++||+++++++.+.+.+.++.
T Consensus 707 ~~~~~~------------------------------------------~-~~~~~lr~i~~gGe~l~~~~~~~~~~~~~~ 743 (1296)
T PRK10252 707 LTPEGA------------------------------------------R-QSCASLRQVFCSGEALPADLCREWQQLTGA 743 (1296)
T ss_pred hccccc------------------------------------------c-ccCCCccEEEEecCCCCHHHHHHHHhcCCC
Confidence 211000 0 001379999999999999999999988899
Q ss_pred ceEEeeccCCCCceeeeecCCc------ccccCcccccccCeEEEEeecCCCCCCCCCCCCCCeEEEecCCccccccCCc
Q 014951 317 PLTQGYGLTESCSGCFTSLADV------FNMIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRP 390 (415)
Q Consensus 317 ~~~~~yG~tE~~~~~~~~~~~~------~~~~~~~G~~~~g~~~~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gY~~~~ 390 (415)
++++.||+||++..++...... .....++|+|+++++++|+| +++.. ++.|+.|||+|+|+++++||++++
T Consensus 744 ~l~n~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~i~d-~~~~~--~~~g~~Gel~i~g~~~~~GY~~~~ 820 (1296)
T PRK10252 744 PLHNLYGPTEAAVDVSWYPAFGEELAAVRGSSVPIGYPVWNTGLRILD-ARMRP--VPPGVAGDLYLTGIQLAQGYLGRP 820 (1296)
T ss_pred EEEeCCCcchhhheeeeeecccccccccCCCCCCcccccCCCEEEEEC-CCCCC--CCCCCceEEEecccccchhhCCCc
Confidence 9999999999987665543322 12236799999999999999 76654 456699999999999999999999
Q ss_pred hhhhhhh-c------CCceecCceEEEcCCCC
Q 014951 391 DLTEEVI-V------DGWFHTGDIGEWQPMEL 415 (415)
Q Consensus 391 ~~~~~~~-~------~g~~~TGDlg~~d~~G~ 415 (415)
+.|.++| . ++||+|||+|++|+||+
T Consensus 821 ~~t~~~f~~~~~~~~~~~y~TGDl~~~~~~G~ 852 (1296)
T PRK10252 821 DLTASRFIADPFAPGERMYRTGDVARWLDDGA 852 (1296)
T ss_pred ccchhhcccCCCCCCCEEEecCceEEEcCCCc
Confidence 9999988 2 34999999999999985
No 74
>PRK09088 acyl-CoA synthetase; Validated
Probab=100.00 E-value=6.5e-46 Score=359.92 Aligned_cols=331 Identities=24% Similarity=0.367 Sum_probs=259.6
Q ss_pred CccCCCCCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEcCCChhhhhhcCccCCCC
Q 014951 1 MRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLY 80 (415)
Q Consensus 1 L~~~Gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~ 80 (415)
|.+.|+++||+|+++++|+++++++++||+++|++++|+++.++++++..++++++++++|++++......
T Consensus 39 l~~~g~~~~~~v~i~~~~~~~~~~~~la~~~~G~~~v~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~--------- 109 (488)
T PRK09088 39 LRRRGCVDGERLAVLARNSVWLVALHFACARVGAIYVPLNWRLSASELDALLQDAEPRLLLGDDAVAAGRT--------- 109 (488)
T ss_pred HHHcCCCCCCEEEEECCCCHHHHHHHHHHHHcCeEEEeeCccCCHHHHHHHHHhCCCCEEEEcchhhcccc---------
Confidence 35679999999999999999999999999999999999999999999999999999999999875432100
Q ss_pred ccEEEEecCCCchhhHHhhhcCceeecHHHHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEeecHHHHHHhhhhh
Q 014951 81 LKTIVSFANVSSSQKKEAEELGVSCFSWEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVD 160 (415)
Q Consensus 81 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~~~~ 160 (415)
..+.+ ..+.+.... ..........++++++++|||||||.||+|.++|+++...+..+.
T Consensus 110 --~~~~~------------------~~~~~~~~~-~~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~ 168 (488)
T PRK09088 110 --DVEDL------------------AAFIASADA-LEPADTPSIPPERVSLILFTSGTSGQPKGVMLSERNLQQTAHNFG 168 (488)
T ss_pred --cccch------------------hhhhhhccc-cccccCCCCCCCCceEEEeCCCCCCCCcEEEEehHHHHHHHHHHH
Confidence 00000 001111110 011112234568899999999999999999999999988776655
Q ss_pred hhhhhccccCCCCCEEEEeCChhhHHHHHH-HHHhhhcCcEEEEeCC-CHHHHHHHHH--hhCCeEEEeCcHHHHHHHHH
Q 014951 161 QMFVVTGKVCSEEDTYFSFLPLAHIYDQII-ETHCIHKGCSIGFWRG-DVRYLMEDIQ--ELKPTMFSGVPRVYDRIYTG 236 (415)
Q Consensus 161 ~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~-~~~~l~~G~~vv~~~~-~~~~~~~~i~--~~~~t~~~~~P~~~~~l~~~ 236 (415)
... .....|++++.+|++|.+++.. +..++..|+++++.+. ++..++..+. ++++|+++++|++++.+.+.
T Consensus 169 ~~~-----~~~~~d~~l~~~pl~~~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~P~~~~~l~~~ 243 (488)
T PRK09088 169 VLG-----RVDAHSSFLCDAPMFHIIGLITSVRPVLAVGGSILVSNGFEPKRTLGRLGDPALGITHYFCVPQMAQAFRAQ 243 (488)
T ss_pred Hhh-----CCCCCcEEEEecchHHHHHHHHHHHHHHhcCCEEEEcCCCCHHHHHHHHHhhccCCcEEeeHHHHHHHHHhC
Confidence 443 5678999999999999999875 5667888999988766 8888888886 48999999999999887541
Q ss_pred HHHhhhcCChhhHHHHHHHHHhhhhccccCCCCCCccchhhHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHHHhcCC
Q 014951 237 ISNKISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGA 316 (415)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~~G~~~~~~~~~~~~~~~~~ 316 (415)
. .....++ +++|.+++||++++.+..+.+.+. +.
T Consensus 244 ~-------------------------------------~~~~~~~--------~~l~~~~~gG~~~~~~~~~~~~~~-g~ 277 (488)
T PRK09088 244 P-------------------------------------GFDAAAL--------RHLTALFTGGAPHAAEDILGWLDD-GI 277 (488)
T ss_pred c-------------------------------------CcCcccc--------ccceEEEecCCCCCHHHHHHHHHh-CC
Confidence 0 0000011 379999999999999888877753 89
Q ss_pred ceEEeeccCCCCceeeeecCC--cccccCcccccccCeEEEEeecCCCCCCCCCCCCCCeEEEecCCccccccCCchhhh
Q 014951 317 PLTQGYGLTESCSGCFTSLAD--VFNMIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTE 394 (415)
Q Consensus 317 ~~~~~yG~tE~~~~~~~~~~~--~~~~~~~~G~~~~g~~~~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gY~~~~~~~~ 394 (415)
++++.||+||++.+....... ...+.+++|+|+++++++|+| +++.. ++.++.|||+++|++++.||+++++.+.
T Consensus 278 ~v~~~YG~TE~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~i~d-~~~~~--~~~g~~Gel~v~~~~~~~gY~~~~~~~~ 354 (488)
T PRK09088 278 PMVDGFGMSEAGTVFGMSVDCDVIRAKAGAAGIPTPTVQTRVVD-DQGND--CPAGVPGELLLRGPNLSPGYWRRPQATA 354 (488)
T ss_pred ceeeeecccccccccccCCCcccccccCCccccCCCCcEEEEEC-CCCCC--CcCCCceEEEEECCccchhhcCChhhhh
Confidence 999999999998754322211 122448899999999999998 66644 4566999999999999999999999998
Q ss_pred hhh-cCCceecCceEEEcCCCC
Q 014951 395 EVI-VDGWFHTGDIGEWQPMEL 415 (415)
Q Consensus 395 ~~~-~~g~~~TGDlg~~d~~G~ 415 (415)
+.| .+|||+|||+|++|++|+
T Consensus 355 ~~~~~~g~~~TGDl~~~~~~g~ 376 (488)
T PRK09088 355 RAFTGDGWFRTGDIARRDADGF 376 (488)
T ss_pred hhhcCCCCeeecceEEEcCCCc
Confidence 888 589999999999999985
No 75
>PRK06145 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.5e-45 Score=358.31 Aligned_cols=341 Identities=23% Similarity=0.330 Sum_probs=269.2
Q ss_pred CccCCCCCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEcCCChhhhhhcCccCCCC
Q 014951 1 MRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLY 80 (415)
Q Consensus 1 L~~~Gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~ 80 (415)
|.+.|+++|++|+++++|+++++++++||+++|++++|+++..+.+++.++++.+++++++++.+.......
T Consensus 44 L~~~g~~~~~~v~i~~~~~~~~~~~~la~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~~~-------- 115 (497)
T PRK06145 44 LHARGIGQGDVVALLMKNSAAFLELAFAASYLGAVFLPINYRLAADEVAYILGDAGAKLLLVDEEFDAIVAL-------- 115 (497)
T ss_pred HHHcCCCCCCEEEEECCCCHHHHHHHHHHHhcCcEEEecccccCHHHHHHHHHhcCCcEEEEccchhhhhhc--------
Confidence 356799999999999999999999999999999999999999999999999999999999998765443210
Q ss_pred ccEEEEecCCCchhhHHhhhcCceeecHHHHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEeecHHHHHHhhhhh
Q 014951 81 LKTIVSFANVSSSQKKEAEELGVSCFSWEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVD 160 (415)
Q Consensus 81 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~~~~ 160 (415)
....+.++.... ..+..+..............++++++++|||||||.||+|++||.++........
T Consensus 116 ~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~~~~~~~~~~ 182 (497)
T PRK06145 116 ETPKIVIDAAAQ-------------ADSRRLAQGGLEIPPQAAVAPTDLVRLMYTSGTTDRPKGVMHSYGNLHWKSIDHV 182 (497)
T ss_pred ccceEEecCccc-------------chhHHHhccCCCCCCCCCCCccceEEEEeCCCCCCCCcEEEEecHHHHHHHHHHH
Confidence 011222221100 0011111111111112345678999999999999999999999999987655443
Q ss_pred hhhhhccccCCCCCEEEEeCChhhHHHHHH-HHHhhhcCcEEEEeCC-CHHHHHHHHHhhCCeEEEeCcHHHHHHHHHHH
Q 014951 161 QMFVVTGKVCSEEDTYFSFLPLAHIYDQII-ETHCIHKGCSIGFWRG-DVRYLMEDIQELKPTMFSGVPRVYDRIYTGIS 238 (415)
Q Consensus 161 ~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~-~~~~l~~G~~vv~~~~-~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~ 238 (415)
..+ .++.+++++...|++|.+++.. .+.+++.|+++++.+. ++..+++.++++++|++.++|+++..++....
T Consensus 183 ~~~-----~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~ll~~~~ 257 (497)
T PRK06145 183 IAL-----GLTASERLLVVGPLYHVGAFDLPGIAVLWVGGTLRIHREFDPEAVLAAIERHRLTCAWMAPVMLSRVLTVPD 257 (497)
T ss_pred Hhh-----CCCCCcEEEEecCchhHhHHHHHHHHHHhccCEEEECCcCCHHHHHHHHHHhCCeEEEehHHHHHHHHcCCC
Confidence 433 6788999999999999988865 5677899999988776 99999999999999999999999988764110
Q ss_pred HhhhcCChhhHHHHHHHHHhhhhccccCCCCCCccchhhHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHHHhc-CCc
Q 014951 239 NKISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTS-GAP 317 (415)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~~G~~~~~~~~~~~~~~~-~~~ 317 (415)
....++ +++|.+++||+++++++.+++.+.+ +.+
T Consensus 258 -------------------------------------~~~~~~--------~~l~~~~~gG~~~~~~~~~~~~~~~~~~~ 292 (497)
T PRK06145 258 -------------------------------------RDRFDL--------DSLAWCIGGGEKTPESRIRDFTRVFTRAR 292 (497)
T ss_pred -------------------------------------cccccc--------ccceEEEecCCCCCHHHHHHHHHHcCCCc
Confidence 000011 3789999999999999999998888 578
Q ss_pred eEEeeccCCCCceeeeecCC-cccccCcccccccCeEEEEeecCCCCCCCCCCCCCCeEEEecCCccccccCCchhhhhh
Q 014951 318 LTQGYGLTESCSGCFTSLAD-VFNMIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEV 396 (415)
Q Consensus 318 ~~~~yG~tE~~~~~~~~~~~-~~~~~~~~G~~~~g~~~~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gY~~~~~~~~~~ 396 (415)
+++.||+||++..++..... .....+++|+|++++++++.+ +++.. ++.++.|||+++|+.++.||+++++.+.+.
T Consensus 293 v~~~YG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~~-~~~~~--~~~~~~Gel~v~g~~~~~Gy~~~~~~~~~~ 369 (497)
T PRK06145 293 YIDAYGLTETCSGDTLMEAGREIEKIGSTGRALAHVEIRIAD-GAGRW--LPPNMKGEICMRGPKVTKGYWKDPEKTAEA 369 (497)
T ss_pred eEEeecCcccCCcceeccCccccccCCCcccCCCCceEEEEC-CCCCC--CCCCCceEEEEECcchhhhhcCChHHHHHH
Confidence 99999999998865543322 223347899999999999999 66654 456699999999999999999999999999
Q ss_pred hcCCceecCceEEEcCCCC
Q 014951 397 IVDGWFHTGDIGEWQPMEL 415 (415)
Q Consensus 397 ~~~g~~~TGDlg~~d~~G~ 415 (415)
|.++||+|||+|++|+||+
T Consensus 370 ~~~~~~~TGDl~~~~~~g~ 388 (497)
T PRK06145 370 FYGDWFRSGDVGYLDEEGF 388 (497)
T ss_pred HhCCCeeccceEEEcCCCc
Confidence 9999999999999999985
No 76
>PRK12467 peptide synthase; Provisional
Probab=100.00 E-value=1.1e-46 Score=431.17 Aligned_cols=334 Identities=19% Similarity=0.248 Sum_probs=273.6
Q ss_pred CccCCCCCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEcCCChhhhhhcCccCCCC
Q 014951 1 MRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLY 80 (415)
Q Consensus 1 L~~~Gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~ 80 (415)
|.++|+++||+|+|+++|++++++++|||+++|++++||+|.++.+++.+++++++++++|++....+.+....
T Consensus 3137 L~~~gv~~g~~V~l~~~~s~~~vv~~lavl~aGa~~vpld~~~p~~rl~~il~~~~~~~vlt~~~~~~~~~~~~------ 3210 (3956)
T PRK12467 3137 LIAIGVGPDVLVGVAVERSVEMIVALLAVLKAGGAYVPLDPEYPRERLAYMIEDSGVKLLLTQAHLLEQLPAPA------ 3210 (3956)
T ss_pred HHHcCCCCCCeEEEEeCCCHHHHHHHHHHHhhCcEeecCCCCChHHHHHHHHhCCCCcEEEechhhhhhccccc------
Confidence 45789999999999999999999999999999999999999999999999999999999999876544432111
Q ss_pred ccEEEEecCCCchhhHHhhhcCceeecHHHHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEeecHHHHHHhhhhh
Q 014951 81 LKTIVSFANVSSSQKKEAEELGVSCFSWEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVD 160 (415)
Q Consensus 81 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~~~~ 160 (415)
...++.++... . .......+.....++++++++|||||||.||||+++|+++.+.+....
T Consensus 3211 ~~~~~~~~~~~-------------------~-~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~~h~~l~~~~~~~~ 3270 (3956)
T PRK12467 3211 GDTALTLDRLD-------------------L-NGYSENNPSTRVMGENLAYVIYTSGSTGKPKGVGVRHGALANHLCWIA 3270 (3956)
T ss_pred CCceeeecchh-------------------h-cccCCCCCcccCCCCceEEEEEccCCCCCcceeeehhHHHHHHHHHHH
Confidence 11222222110 0 001111222345789999999999999999999999999999998877
Q ss_pred hhhhhccccCCCCCEEEEeCChhhHHHHHHHHHhhhcCcEEEEeCC---CHHHHHHHHHhhCCeEEEeCcHHHHHHHHHH
Q 014951 161 QMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG---DVRYLMEDIQELKPTMFSGVPRVYDRIYTGI 237 (415)
Q Consensus 161 ~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~vv~~~~---~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~ 237 (415)
..+ .+..+|++++++|++|..+...++.+++.|+++++.+. ++..+++.|+++++|++.++|+++..+++..
T Consensus 3271 ~~~-----~~~~~d~~l~~~~~~fd~~~~~~~~~L~~G~~l~i~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~l~~l~~~~ 3345 (3956)
T PRK12467 3271 EAY-----ELDANDRVLLFMSFSFDGAQERFLWTLICGGCLVVRDNDLWDPEELWQAIHAHRISIACFPPAYLQQFAEDA 3345 (3956)
T ss_pred Hhc-----CCCcCCEEEEecCccHhHHHHHHHHHHhCCCEEEECCcccCCHHHHHHHHHHcCCEEEEcCHHHHHHHHhcc
Confidence 776 78899999999999999998889999999999999874 8999999999999999999999998875411
Q ss_pred HHhhhcCChhhHHHHHHHHHhhhhccccCCCCCCccchhhHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHHHhc-CC
Q 014951 238 SNKISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTS-GA 316 (415)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~~G~~~~~~~~~~~~~~~-~~ 316 (415)
.. ...++||.+++|||++++++.+.+.+.+ +.
T Consensus 3346 ~~-----------------------------------------------~~~~~lr~~~~gGe~~~~~~~~~~~~~~~~~ 3378 (3956)
T PRK12467 3346 GG-----------------------------------------------ADCASLDIYVFGGEAVPPAAFEQVKRKLKPR 3378 (3956)
T ss_pred cc-----------------------------------------------cCCCCceEEEEecCCCCHHHHHHHHHhCCCC
Confidence 00 0013799999999999999999988776 57
Q ss_pred ceEEeeccCCCCceeeeecCCcc----cccCcccccccCeEEEEeecCCCCCCCCCCCCCCeEEEecCCccccccCCchh
Q 014951 317 PLTQGYGLTESCSGCFTSLADVF----NMIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDL 392 (415)
Q Consensus 317 ~~~~~yG~tE~~~~~~~~~~~~~----~~~~~~G~~~~g~~~~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gY~~~~~~ 392 (415)
+++|.||+||++..++....... ....++|+|++|++++|+| +++.+ ++.|+.|||+|+|+++++||+|+|++
T Consensus 3379 ~l~n~YG~TE~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~v~d-~~~~~--vp~G~~GEL~i~G~~v~~GY~~~~~~ 3455 (3956)
T PRK12467 3379 GLTNGYGPTEAVVTVTLWKCGGDAVCEAPYAPIGRPVAGRSIYVLD-GQLNP--VPVGVAGELYIGGVGLARGYHQRPSL 3455 (3956)
T ss_pred EEEeCcccchhEeeeEEEecccccccCCCCCCCccccCCCEEEEEC-CCCCC--CCCCCCceEEEcchhhhhhccCCccc
Confidence 89999999999887664433221 1236899999999999999 76654 45679999999999999999999999
Q ss_pred hhhhh-cC-------CceecCceEEEcCCCC
Q 014951 393 TEEVI-VD-------GWFHTGDIGEWQPMEL 415 (415)
Q Consensus 393 ~~~~~-~~-------g~~~TGDlg~~d~~G~ 415 (415)
|.++| .+ +||||||+|++|+||+
T Consensus 3456 T~~~F~~~p~~~~g~r~yrTGDl~~~~~dG~ 3486 (3956)
T PRK12467 3456 TAERFVADPFSGSGGRLYRTGDLARYRADGV 3486 (3956)
T ss_pred chhhccCCCCCCCCceeeccchhheecCCCc
Confidence 99999 44 3699999999999995
No 77
>PRK06188 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.3e-45 Score=360.85 Aligned_cols=348 Identities=21% Similarity=0.269 Sum_probs=272.6
Q ss_pred CccCCCCCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEcCC-ChhhhhhcCccCCC
Q 014951 1 MRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQEN-KIPSILSCLPRCCL 79 (415)
Q Consensus 1 L~~~Gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~ii~~~~-~~~~~~~~~~~~~~ 79 (415)
|.+.|+++||+|+++++|+++++++++||+++|+++++++|..+.+++..+++.++++.+++++. .......... ...
T Consensus 54 L~~~gv~~~~~V~i~~~~~~~~~~~~la~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 132 (524)
T PRK06188 54 FEALGLGTGDAVALLSLNRPEVLMAIGAAQLAGLRRTALHPLGSLDDHAYVLEDAGISTLIVDPAPFVERALALLA-RVP 132 (524)
T ss_pred HHHcCCCCCCEEEEECCCCHHHHHHHHHHHHhCCEEEecccCCCHHHHHHHHHhcCceEEEEecchhhHHHHHHhh-hcC
Confidence 35679999999999999999999999999999999999999999999999999999999999876 3333322221 113
Q ss_pred CccEEEEecCCCchhhHHhhhcCceeecHHHHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEeecHHHHHHhhhh
Q 014951 80 YLKTIVSFANVSSSQKKEAEELGVSCFSWEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSV 159 (415)
Q Consensus 80 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~~~ 159 (415)
....++.+...... ..+.+...............++++++++|||||||.||+|.++|.++...+...
T Consensus 133 ~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~s~~~l~~~~~~~ 200 (524)
T PRK06188 133 SLKHVLTLGPVPDG------------VDLLAAAAKFGPAPLVAAALPPDIAGLAYTGGTTGKPKGVMGTHRSIATMAQIQ 200 (524)
T ss_pred CceEEEEeCCccch------------hhHHHhhhccCcccccccCCCCCeEEEEeCCCCCCCCceeeeehHHHHHHHHHH
Confidence 33445544332110 001111111011111122345679999999999999999999999999988876
Q ss_pred hhhhhhccccCCCCCEEEEeCChhhHHHHHHHHHhhhcCcEEEEeCC-CHHHHHHHHHhhCCeEEEeCcHHHHHHHHHHH
Q 014951 160 DQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG-DVRYLMEDIQELKPTMFSGVPRVYDRIYTGIS 238 (415)
Q Consensus 160 ~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~vv~~~~-~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~ 238 (415)
...+ .+..++++++.+|++|..++. ++..++.|+++++.+. ++..+++.++++++|+++++|+++..+++...
T Consensus 201 ~~~~-----~~~~~~~~l~~~pl~~~~g~~-~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~l~~l~~~~~ 274 (524)
T PRK06188 201 LAEW-----EWPADPRFLMCTPLSHAGGAF-FLPTLLRGGTVIVLAKFDPAEVLRAIEEQRITATFLVPTMIYALLDHPD 274 (524)
T ss_pred Hhhc-----CCCcCcEEEEecCchhhhhHH-HHHHHHcCCEEEEcCCCCHHHHHHHHHHhCCEEEEehHHHHHHHHhCcC
Confidence 6655 678899999999999988864 5677889999999887 99999999999999999999999988765210
Q ss_pred HhhhcCChhhHHHHHHHHHhhhhccccCCCCCCccchhhHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHHHhcCCce
Q 014951 239 NKISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPL 318 (415)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~~G~~~~~~~~~~~~~~~~~~~ 318 (415)
. ...++ +++|.+++||++++++....+.+.++..+
T Consensus 275 ~-------------------------------------~~~~l--------~~lr~~~~gg~~~~~~~~~~~~~~~~~~~ 309 (524)
T PRK06188 275 L-------------------------------------RTRDL--------SSLETVYYGASPMSPVRLAEAIERFGPIF 309 (524)
T ss_pred c-------------------------------------cCCCC--------cceeEEEEcCCCCCHHHHHHHHHHhCchh
Confidence 0 00011 38999999999999998888888889999
Q ss_pred EEeeccCCCCceeeeecCCc-----ccccCcccccccCeEEEEeecCCCCCCCCCCCCCCeEEEecCCccccccCCchhh
Q 014951 319 TQGYGLTESCSGCFTSLADV-----FNMIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLT 393 (415)
Q Consensus 319 ~~~yG~tE~~~~~~~~~~~~-----~~~~~~~G~~~~g~~~~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gY~~~~~~~ 393 (415)
++.||+||++..+....... ....+++|+|++|++++|++ +++. +++.|+.|||+++|+.++.||+++++.+
T Consensus 310 ~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~G~p~~g~~v~i~~-~~~~--~~~~g~~Gel~v~~~~~~~gy~~~~~~~ 386 (524)
T PRK06188 310 AQYYGQTEAPMVITYLRKRDHDPDDPKRLTSCGRPTPGLRVALLD-EDGR--EVAQGEVGEICVRGPLVMDGYWNRPEET 386 (524)
T ss_pred hheeCccccCCceeecCchhccccccccCCccccccCCcEEEEEc-CCCC--CCCCCCeeEEEEECcchhhhhcCChHHh
Confidence 99999999976554432211 12347899999999999999 6665 4456799999999999999999999999
Q ss_pred hhhhcCCceecCceEEEcCCCC
Q 014951 394 EEVIVDGWFHTGDIGEWQPMEL 415 (415)
Q Consensus 394 ~~~~~~g~~~TGDlg~~d~~G~ 415 (415)
...|.+|||+|||+|++|+||+
T Consensus 387 ~~~~~~g~~~TGDl~~~~~~g~ 408 (524)
T PRK06188 387 AEAFRDGWLHTGDVAREDEDGF 408 (524)
T ss_pred hhhhcCCceeecceEEEcCCcc
Confidence 9999999999999999999985
No 78
>TIGR03205 pimA dicarboxylate--CoA ligase PimA. PimA, a member of a large family of acyl-CoA ligases, is found in a characteristic operon pimFABCDE for the metabolism of pimelate and related compounds. It is found, so far, in Bradyrhizobium japonicum and several strains of Rhodopseudomonas palustris. PimA from R. palustris was shown to be active as a CoA ligase for C(7) to C(14) dicarboxylates and fatty acids.
Probab=100.00 E-value=1.9e-45 Score=360.83 Aligned_cols=366 Identities=23% Similarity=0.386 Sum_probs=271.4
Q ss_pred CccCCCCCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEcCCC--hhhhhhcCccCC
Q 014951 1 MRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENK--IPSILSCLPRCC 78 (415)
Q Consensus 1 L~~~Gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~ii~~~~~--~~~~~~~~~~~~ 78 (415)
|.+.|+++||+|+++++|+++++++++||+++|++++|++|..+.+++.++++.++++++|+++.. ...+.+....
T Consensus 63 L~~~gi~~g~~V~i~~~~~~~~~~~~la~~~~G~~~v~l~~~~~~~~l~~~i~~~~~~~vi~~~~~~~~~~~~~~~~~-- 140 (541)
T TIGR03205 63 LLRAGYGKDASVALYLGNTPDHPINFFGALKAGARVVHLSPLDGERALSHKLSDSGARLLITSDLAALLPMALKFLEK-- 140 (541)
T ss_pred HHHcCCCCCCEEEEECCCChHHHHHHHHHHhcCeEEEecCCCCCHHHHHHHHhhcCceEEEEeCchhhhHHHHHhhhc--
Confidence 456799999999999999999999999999999999999999999999999999999999998642 1111111111
Q ss_pred CCccEEEEecCCCc-hhhHH--hhhcCceeecHHHHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEeecHHHHHH
Q 014951 79 LYLKTIVSFANVSS-SQKKE--AEELGVSCFSWEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAE 155 (415)
Q Consensus 79 ~~~~~v~~~~~~~~-~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~ 155 (415)
.....++..+.... ..... ..........++++..............++++++++|||||||.||+|+++|.++...
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~l~~~ 220 (541)
T TIGR03205 141 GLLDRLIVCEDDNWGKVGTPQAPIPADPRIVTYADFVKGAAAPAEWPAVTPDDVALLQYTGGTTGLPKGAMLTHGNLTSA 220 (541)
T ss_pred ccceEEEEecccccccccccccccCCCcccccHHHHHhcCCCCCCCCCCCccCeEEEEECCCCCCCCcEEEEeHHHHHHH
Confidence 11223333322110 00000 0000112344555554322222233456789999999999999999999999998765
Q ss_pred hhhhhhhhhh-ccccCCCCCEEEEeCChhhHHHHHH-HHHhhhcCcEEEEeCC-CHHHHHHHHHhhCCeEEEeCcHHHHH
Q 014951 156 VLSVDQMFVV-TGKVCSEEDTYFSFLPLAHIYDQII-ETHCIHKGCSIGFWRG-DVRYLMEDIQELKPTMFSGVPRVYDR 232 (415)
Q Consensus 156 ~~~~~~~~~~-~~~~~~~~d~~l~~~p~~~~~~~~~-~~~~l~~G~~vv~~~~-~~~~~~~~i~~~~~t~~~~~P~~~~~ 232 (415)
.... ..+.. ........+++++..|++|.+++.. ++.+++.|+++++... ++..+++.|+++++|++.++|+++..
T Consensus 221 ~~~~-~~~~~~~~~~~~~~~~~l~~~p~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~ 299 (541)
T TIGR03205 221 VSIY-DVWGKPSRATRGDVERVICVLPLFHIYALTVILLRSLRRGDLISLHQRFDVAAVFRDIEEKRATVFPGVPTMWIA 299 (541)
T ss_pred HHHH-HhhcccccccCCCCceEEEeccHHHHHHHHHHHHHHHhcCCEEEecCCCCHHHHHHHHHHcCCeEeechHHHHHH
Confidence 4422 11110 0112234589999999999988775 6678899999888765 99999999999999999999999987
Q ss_pred HHHHHHHhhhcCChhhHHHHHHHHHhhhhccccCCCCCCccchhhHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHHH
Q 014951 233 IYTGISNKISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRV 312 (415)
Q Consensus 233 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~~G~~~~~~~~~~~~~ 312 (415)
+++.. .....++ +++|.+++||+++++++.+++++
T Consensus 300 l~~~~-------------------------------------~~~~~~~--------~~l~~i~~gg~~~~~~~~~~~~~ 334 (541)
T TIGR03205 300 LANDP-------------------------------------SLEKRDL--------SSLATIGSGGAPLPVEVANFFER 334 (541)
T ss_pred HHhCc-------------------------------------cccccCc--------cccceEEEccccCCHHHHHHHHH
Confidence 75310 0000011 37999999999999999999998
Q ss_pred hcCCceEEeeccCCCCceeeeecCCcccccCcccccccCeEEEEeecCCCCCCCCCCCCCCeEEEecCCccccccCCchh
Q 014951 313 TSGAPLTQGYGLTESCSGCFTSLADVFNMIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDL 392 (415)
Q Consensus 313 ~~~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~G~~~~g~~~~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gY~~~~~~ 392 (415)
.++.++++.||+||++..+...........+++|.|++++.++|++.++.+ .+++.|+.|||+++|++++.||+++++.
T Consensus 335 ~~~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~G~~~~~~~~~v~~~d~~~-~~~~~g~~Gel~v~~~~~~~gy~~~~~~ 413 (541)
T TIGR03205 335 KTGLKLKSGWGMTETCSPGTGHPPEGPDKPGSIGLMLPGIELDVVSLDDPT-KVLPPGEVGELRIRGPNVTRGYWNRPEE 413 (541)
T ss_pred HhCCCeecccccccCCcccccCCCCCCCCCCCcceeccCceeEEEecCCCC-ccCCCCCeeEEEEecCCccccccCChhh
Confidence 889999999999999877655443333344789999999999987633322 4556779999999999999999999999
Q ss_pred hhhhhcCCceecCceEEEcCCCC
Q 014951 393 TEEVIVDGWFHTGDIGEWQPMEL 415 (415)
Q Consensus 393 ~~~~~~~g~~~TGDlg~~d~~G~ 415 (415)
+.+.|.++||+|||++++++||+
T Consensus 414 ~~~~~~~~~~~TGD~~~~~~~g~ 436 (541)
T TIGR03205 414 SAEAFVGDRFLTGDIGYMDTDGY 436 (541)
T ss_pred hHhhhccCCcccCceEEEcCCce
Confidence 99999899999999999999985
No 79
>PRK08315 AMP-binding domain protein; Validated
Probab=100.00 E-value=2.3e-45 Score=362.03 Aligned_cols=352 Identities=24% Similarity=0.426 Sum_probs=274.2
Q ss_pred CccCCCCCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEcCCChh-----hhhhcCc
Q 014951 1 MRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIP-----SILSCLP 75 (415)
Q Consensus 1 L~~~Gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~-----~~~~~~~ 75 (415)
|.+.|+++||+|+++++|+++++++++||+++|++++|++|.++.+++..++++++++++|++.+... .+.....
T Consensus 60 L~~~gi~~g~~V~i~~~~~~~~~~~~la~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~ 139 (559)
T PRK08315 60 LLALGIEKGDRVGIWAPNVPEWVLTQFATAKIGAILVTINPAYRLSELEYALNQSGCKALIAADGFKDSDYVAMLYELAP 139 (559)
T ss_pred HHHcCCCCCCEEEEECCCChHHHHHHHHHHHhCeEEEecCccCCHHHHHHHHHhcCCCEEEEeccccccchHHHHHHhhh
Confidence 35679999999999999999999999999999999999999999999999999999999999875422 1111111
Q ss_pred cC------------CCCccEEEEecCCCchhhHHhhhcCceeecHHHHHhcCC------CCCCCCCCCCCCeEEEEecCC
Q 014951 76 RC------------CLYLKTIVSFANVSSSQKKEAEELGVSCFSWEEFLQLGT------LDCELPPKKKTNISTIMYTSG 137 (415)
Q Consensus 76 ~~------------~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~i~~TSG 137 (415)
.. .+..+.++.++... ......++++..... .........++++++++||||
T Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSG 209 (559)
T PRK08315 140 ELATCEPGQLQSARLPELRRVIFLGDEK----------HPGMLNFDELLALGRAVDDAELAARQATLDPDDPINIQYTSG 209 (559)
T ss_pred hhhcccccccccccCCCceeEEeecccC----------CcccccHHHHHhhccccccccccchhccCCCCCcEEEEEcCC
Confidence 00 12233444443211 011234444433220 011122345788999999999
Q ss_pred CCCCCceEEeecHHHHHHhhhhhhhhhhccccCCCCCEEEEeCChhhHHHHHH-HHHhhhcCcEEEEeCC--CHHHHHHH
Q 014951 138 TTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQII-ETHCIHKGCSIGFWRG--DVRYLMED 214 (415)
Q Consensus 138 tTG~pK~v~~th~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~-~~~~l~~G~~vv~~~~--~~~~~~~~ 214 (415)
|||.||+|.+||.++..++......+ .++.+|+++..+|++|..++.. ++.++..|+++++... ++..+++.
T Consensus 210 tTG~PK~v~~s~~~l~~~~~~~~~~~-----~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~ 284 (559)
T PRK08315 210 TTGFPKGATLTHRNILNNGYFIGEAM-----KLTEEDRLCIPVPLYHCFGMVLGNLACVTHGATMVYPGEGFDPLATLAA 284 (559)
T ss_pred CCCCcceEEeeHHHHHHHHHHHHHhc-----CCCCCceEEEecCcHHHHHHHHHHHHHHhccceEEEecCCCCHHHHHHH
Confidence 99999999999999998887766655 7789999999999999999875 6788999999986543 89999999
Q ss_pred HHhhCCeEEEeCcHHHHHHHHHHHHhhhcCChhhHHHHHHHHHhhhhccccCCCCCCccchhhHHHHHHHHHHhCCceeE
Q 014951 215 IQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQA 294 (415)
Q Consensus 215 i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~ 294 (415)
++++++|+++++|+++..++.... .+..++ +++|.
T Consensus 285 l~~~~~t~~~~~P~~~~~~~~~~~-------------------------------------~~~~~~--------~~lr~ 319 (559)
T PRK08315 285 VEEERCTALYGVPTMFIAELDHPD-------------------------------------FARFDL--------SSLRT 319 (559)
T ss_pred HHHcCCeEEecchHHHHHHHhCcc-------------------------------------cCCCCc--------hhhhe
Confidence 999999999999999987654110 000011 37999
Q ss_pred EEEecCCCCHHHHHHHHHhcCC-ceEEeeccCCCCceeeeecCCc--ccccCcccccccCeEEEEeecCC-CCCCCCCCC
Q 014951 295 MLSGAAPLPIHVEEFLRVTSGA-PLTQGYGLTESCSGCFTSLADV--FNMIGTVGVPMTTVEARLESVPE-MGYDALSSV 370 (415)
Q Consensus 295 v~~~G~~~~~~~~~~~~~~~~~-~~~~~yG~tE~~~~~~~~~~~~--~~~~~~~G~~~~g~~~~i~~~~~-~~~~~~~~~ 370 (415)
+++||+++++++.+.+.+.++. ++++.||+||++.+++...... .....++|+|++|++++|+| ++ +. +++.|
T Consensus 320 ~~~~G~~~~~~~~~~~~~~~~~~~l~~~YG~tE~~~~~~~~~~~~~~~~~~~~vG~p~~~~~v~i~d-~~~~~--~~~~g 396 (559)
T PRK08315 320 GIMAGSPCPIEVMKRVIDKMHMSEVTIAYGMTETSPVSTQTRTDDPLEKRVTTVGRALPHLEVKIVD-PETGE--TVPRG 396 (559)
T ss_pred eEecCCCCCHHHHHHHHHHcCCcceeEEEcccccccceeecCcccchhhccCCCCccCCCcEEEEEc-CccCC--cCCCC
Confidence 9999999999999999888876 4999999999987665443322 22357899999999999999 55 54 44567
Q ss_pred CCCeEEEecCCccccccCCchhhhhhh-cCCceecCceEEEcCCCC
Q 014951 371 PRGEICLRGNTLFSGYYKRPDLTEEVI-VDGWFHTGDIGEWQPMEL 415 (415)
Q Consensus 371 ~~Gel~v~~~~~~~gY~~~~~~~~~~~-~~g~~~TGDlg~~d~~G~ 415 (415)
+.|||+|+|+.++.||+++++.+...| .++||+|||+|++|+||+
T Consensus 397 ~~GEl~v~g~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~dg~ 442 (559)
T PRK08315 397 EQGELCTRGYSVMKGYWNDPEKTAEAIDADGWMHTGDLAVMDEEGY 442 (559)
T ss_pred CceEEEEECchhhhhhcCChhHHhhcCCCCCCEEccceEEEcCCce
Confidence 999999999999999999999998888 789999999999999884
No 80
>PRK06164 acyl-CoA synthetase; Validated
Probab=100.00 E-value=2e-45 Score=360.89 Aligned_cols=355 Identities=20% Similarity=0.271 Sum_probs=268.5
Q ss_pred CccCCCCCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEcCCCh-----hhhhhcCc
Q 014951 1 MRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKI-----PSILSCLP 75 (415)
Q Consensus 1 L~~~Gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~-----~~~~~~~~ 75 (415)
|.+.|+++||+|+++++|+++++++++||+++|++++|+++..+.+++.++++.++++++|++.+.. +.+.....
T Consensus 52 L~~~g~~~g~~V~i~~~n~~~~~~~~la~~~~G~~~v~l~~~~~~~~l~~~i~~~~~~~ii~~~~~~~~~~~~~~~~~~~ 131 (540)
T PRK06164 52 LAAQGVRRGDRVAVWLPNCIEWVVLFLACARLGATVIAVNTRYRSHEVAHILGRGRARWLVVWPGFKGIDFAAILAAVPP 131 (540)
T ss_pred HHHhCCCCCCEEEEEcCCcHHHHHHHHHHHHhCcEEEecCCCCCcHHHHHHHHhcCccEEEEccccccccHHHHhhcccc
Confidence 3567999999999999999999999999999999999999999999999999999999999987642 12222222
Q ss_pred cCCCCccEEEEecCCCchhhHHhhhcCceeecHHHHHhcC-CCC---CCCCCCCCCCeEEEEecCCCCCCCceEEeecHH
Q 014951 76 RCCLYLKTIVSFANVSSSQKKEAEELGVSCFSWEEFLQLG-TLD---CELPPKKKTNISTIMYTSGTTGEPKGVVLTNQA 151 (415)
Q Consensus 76 ~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~---~~~~~~~~~~~~~i~~TSGtTG~pK~v~~th~~ 151 (415)
......+.++.++....... ......+.+..... ... .......++++++++|||||||.||+|+++|.+
T Consensus 132 ~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~ 205 (540)
T PRK06164 132 DALPPLRAIAVVDDAADATP------APAPGARVQLFALPDPAPPAAAGERAADPDAGALLFTTSGTTSGPKLVLHRQAT 205 (540)
T ss_pred cccCCcceEEEeccCcccCC------CCCcccccccccccccCCcccccccCCCCCceEEEEECCCCCCCCcEEEEehHH
Confidence 22233445555442110000 00000111111110 000 001223468899999999999999999999999
Q ss_pred HHHHhhhhhhhhhhccccCCCCCEEEEeCChhhHHHHHHHHHhhhcCcEEEEeCC-CHHHHHHHHHhhCCeEEEeCcHHH
Q 014951 152 IVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG-DVRYLMEDIQELKPTMFSGVPRVY 230 (415)
Q Consensus 152 l~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~vv~~~~-~~~~~~~~i~~~~~t~~~~~P~~~ 230 (415)
+...+......+ .+..++++++.+|++|.+++..++.++..|+++++.+. ++..+++.|+++++|+++++|+++
T Consensus 206 l~~~~~~~~~~~-----~~~~~~~~l~~~p~~~~~g~~~~~~~l~~G~~~~~~~~~~~~~~~~~l~~~~~t~~~~~p~~l 280 (540)
T PRK06164 206 LLRHARAIARAY-----GYDPGAVLLAALPFCGVFGFSTLLGALAGGAPLVCEPVFDAARTARALRRHRVTHTFGNDEML 280 (540)
T ss_pred HHHHHHHHHHhc-----CCCCCCEEEEcCCchhHHHHHHHHHHHhcCceEEecCCCCHHHHHHHHHHhCCeeecCCHHHH
Confidence 998888776666 67789999999999999999888889999999998876 999999999999999999999999
Q ss_pred HHHHHHHHHhhhcCChhhHHHHHHHHHhhhhccccCCCCCCccchhhHHHHHHHHHHhCCceeEEEEec-CCCCHHHHHH
Q 014951 231 DRIYTGISNKISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGA-APLPIHVEEF 309 (415)
Q Consensus 231 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~~G-~~~~~~~~~~ 309 (415)
..+.+... ...++ ++++.+.++| .+...++.++
T Consensus 281 ~~l~~~~~--------------------------------------~~~~~--------~~l~~~~~~~~~~~~~~~~~~ 314 (540)
T PRK06164 281 RRILDTAG--------------------------------------ERADF--------PSARLFGFASFAPALGELAAL 314 (540)
T ss_pred HHHHHhhc--------------------------------------ccCCC--------cceeeeeeccCCcchHHHHHH
Confidence 98865300 00001 3677776665 5566677777
Q ss_pred HHHhcCCceEEeeccCCCCceeeeecCCcc--cccCcccccc-cCeEEEEeecCCCCCCCCCCCCCCeEEEecCCccccc
Q 014951 310 LRVTSGAPLTQGYGLTESCSGCFTSLADVF--NMIGTVGVPM-TTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGY 386 (415)
Q Consensus 310 ~~~~~~~~~~~~yG~tE~~~~~~~~~~~~~--~~~~~~G~~~-~g~~~~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gY 386 (415)
+.+. ++++++.||+||++.++.....+.. ....+.|.++ +++.++|+| ++++ .+++.|+.||||++|++++.||
T Consensus 315 ~~~~-~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d-~~~~-~~~~~g~~Gel~v~g~~~~~gY 391 (540)
T PRK06164 315 ARAR-GVPLTGLYGSSEVQALVALQPATDPVSVRIEGGGRPASPEARVRARD-PQDG-ALLPDGESGEIEIRAPSLMRGY 391 (540)
T ss_pred Hhhc-CCceecceeeccccceeeccCCCCCCcceeccCccccCCCeEEEEec-CCCC-cCCCCCCeeEEEEecccccccc
Confidence 7654 8899999999999876655443221 2235678775 899999999 4433 4556779999999999999999
Q ss_pred cCCchhhhhhh-cCCceecCceEEEcCCCC
Q 014951 387 YKRPDLTEEVI-VDGWFHTGDIGEWQPMEL 415 (415)
Q Consensus 387 ~~~~~~~~~~~-~~g~~~TGDlg~~d~~G~ 415 (415)
+++++.+.+.| .+|||+|||+|++|+||+
T Consensus 392 ~~~~~~t~~~~~~~~~~~TGDl~~~~~~g~ 421 (540)
T PRK06164 392 LDNPDATARALTDDGYFRTGDLGYTRGDGQ 421 (540)
T ss_pred cCCchhhhhcccCCCceecCCeEEEcCCce
Confidence 99999999998 689999999999999984
No 81
>PLN02479 acetate-CoA ligase
Probab=100.00 E-value=1.5e-45 Score=363.09 Aligned_cols=365 Identities=22% Similarity=0.330 Sum_probs=264.7
Q ss_pred CccCCCCCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEcCCChhhhhhcCccC---
Q 014951 1 MRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRC--- 77 (415)
Q Consensus 1 L~~~Gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~--- 77 (415)
|.+.|+++||+|+++++|+++++++++||+++|++++||++.++.+++.++++.++++++|++++..+.........
T Consensus 62 L~~~g~~~gd~V~i~~~n~~~~~~~~la~~~~G~v~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~ 141 (567)
T PLN02479 62 LAKRSIGPGSTVAVIAPNIPAMYEAHFGVPMAGAVVNCVNIRLNAPTIAFLLEHSKSEVVMVDQEFFTLAEEALKILAEK 141 (567)
T ss_pred HHHcCCCCCCEEEEECCCcHHHHHHHHHHHhCCcEEEEeccccCHHHHHHHHhhcCceEEEEchhhhhHHHHHHHHHhhc
Confidence 35679999999999999999999999999999999999999999999999999999999999987655433321100
Q ss_pred ---CCCccEEEEecCCCchhhHHhhhcCceeecHHHHHhcCCCCCC-CCCCCCCCeEEEEecCCCCCCCceEEeecHHHH
Q 014951 78 ---CLYLKTIVSFANVSSSQKKEAEELGVSCFSWEEFLQLGTLDCE-LPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIV 153 (415)
Q Consensus 78 ---~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~TSGtTG~pK~v~~th~~l~ 153 (415)
......++.+....................+++++........ .+....+++++++|||||||.||+|.+||+++.
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~yTSGTTG~PKgV~~sh~~~~ 221 (567)
T PLN02479 142 KKSSFKPPLLIVIGDPTCDPKSLQYALGKGAIEYEKFLETGDPEFAWKPPADEWQSIALGYTSGTTASPKGVVLHHRGAY 221 (567)
T ss_pred ccccCCCceEEEecCCcCCccccccccccCcccHHHHHhccccccccCCCCCcccceEEEECCCCCCCCcEEEeccHHHH
Confidence 0111233443321110000000011123456665543311111 122334567889999999999999999999987
Q ss_pred HHhhhhhhhhhhccccCCCCCEEEEeCChhhHHHHHHHH-HhhhcCcEEEEeCCCHHHHHHHHHhhCCeEEEeCcHHHHH
Q 014951 154 AEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIET-HCIHKGCSIGFWRGDVRYLMEDIQELKPTMFSGVPRVYDR 232 (415)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~-~~l~~G~~vv~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~ 232 (415)
.........+ .+..++++++.+|++|..++...+ ..++.|.++++...++..+++.++++++|++.++|+++..
T Consensus 222 ~~~~~~~~~~-----~~~~~~~~~~~~p~~h~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~t~~~~~P~~~~~ 296 (567)
T PLN02479 222 LMALSNALIW-----GMNEGAVYLWTLPMFHCNGWCFTWTLAALCGTNICLRQVTAKAIYSAIANYGVTHFCAAPVVLNT 296 (567)
T ss_pred HHHHHHHhhc-----CCCCCCEEEEecchhhhhhHHHHHHHHhhcCceEeccCCCHHHHHHHHHHcCCeEEEecHHHHHH
Confidence 6655443333 567889999999999998876544 3466677766665699999999999999999999999998
Q ss_pred HHHHHHHhhhcCChhhHHHHHHHHHhhhhccccCCCCCCccchhhHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHHH
Q 014951 233 IYTGISNKISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRV 312 (415)
Q Consensus 233 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~~G~~~~~~~~~~~~~ 312 (415)
+++..... . ....++++.++++|+++++++.+++++
T Consensus 297 l~~~~~~~-------------------------------------~-------~~~~~~l~~~~~~G~~~~~~~~~~~~~ 332 (567)
T PLN02479 297 IVNAPKSE-------------------------------------T-------ILPLPRVVHVMTAGAAPPPSVLFAMSE 332 (567)
T ss_pred HHhhhhhc-------------------------------------c-------cccccceeEEEEcCCCCCHHHHHHHHh
Confidence 86521100 0 000137899999999999999999887
Q ss_pred hcCCceEEeeccCCCCceeeeec--C--------CcccccCcccccccCeE-EEEeecCCCCCCCCCCCCCCeEEEecCC
Q 014951 313 TSGAPLTQGYGLTESCSGCFTSL--A--------DVFNMIGTVGVPMTTVE-ARLESVPEMGYDALSSVPRGEICLRGNT 381 (415)
Q Consensus 313 ~~~~~~~~~yG~tE~~~~~~~~~--~--------~~~~~~~~~G~~~~g~~-~~i~~~~~~~~~~~~~~~~Gel~v~~~~ 381 (415)
. +.++++.||+||+++.+.... + .......+.|.+.+|+. ++|++.+++..++.+.++.|||+++|++
T Consensus 333 ~-~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~i~d~~~~~~~~~~g~~~GEl~v~g~~ 411 (567)
T PLN02479 333 K-GFRVTHTYGLSETYGPSTVCAWKPEWDSLPPEEQARLNARQGVRYIGLEGLDVVDTKTMKPVPADGKTMGEIVMRGNM 411 (567)
T ss_pred c-CCceecccccccccccccceeccccccccCcccccccccccCCCcCCcCceeEEcCCCCcccCCCCCCceEEEEeccc
Confidence 5 889999999999865433221 0 00111246788888876 7888733444343333368999999999
Q ss_pred ccccccCCchhhhhhhcCCceecCceEEEcCCCC
Q 014951 382 LFSGYYKRPDLTEEVIVDGWFHTGDIGEWQPMEL 415 (415)
Q Consensus 382 ~~~gY~~~~~~~~~~~~~g~~~TGDlg~~d~~G~ 415 (415)
++.|||++++.+.+.|.+|||+|||+|++|++|+
T Consensus 412 ~~~GY~~~~~~t~~~~~~g~~~TGDl~~~~~~g~ 445 (567)
T PLN02479 412 VMKGYLKNPKANEEAFANGWFHSGDLGVKHPDGY 445 (567)
T ss_pred hhhhhhcCcccccchhcCCceecceeEEEcCCcc
Confidence 9999999999999999999999999999999985
No 82
>PRK13388 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=2.2e-45 Score=359.59 Aligned_cols=338 Identities=16% Similarity=0.189 Sum_probs=258.8
Q ss_pred CccCCC-CCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEcCCChhhhhhcCccCCC
Q 014951 1 MRSRGV-NPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCL 79 (415)
Q Consensus 1 L~~~Gv-~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~ 79 (415)
|.+.|+ ++||+|+++++|+++++++++||+++|++++||+|.++.+++..+++.++++++|++++....+.... .+
T Consensus 43 L~~~g~~~~~~~V~i~~~n~~~~v~~~lA~~~~Ga~~v~l~p~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~~~---~~ 119 (540)
T PRK13388 43 LIALADPDRPLHVGVLLGNTPEMLFWLAAAALGGYVLVGLNTTRRGAALAADIRRADCQLLVTDAEHRPLLDGLD---LP 119 (540)
T ss_pred HHHhcCCCCCCEEEEECCCCcHHHHHHHHHHhCCCEEEEecccCChHHHHHHHHhcCCCEEEEChhhhHHHHhhc---cc
Confidence 456799 89999999999999999999999999999999999999999999999999999999887665543321 11
Q ss_pred CccEEEEecCCCchhhHHhhhcCceeecHHHHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEeecHHHHHHhhhh
Q 014951 80 YLKTIVSFANVSSSQKKEAEELGVSCFSWEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSV 159 (415)
Q Consensus 80 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~~~ 159 (415)
.. .++.++.. .+.+++.......+.....++++++++|||||||.||+|.++|.++.......
T Consensus 120 ~~-~~i~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~ 182 (540)
T PRK13388 120 GV-RVLDVDTP----------------AYAELVAAAGALTPHREVDAMDPFMLIFTSGTTGAPKAVRCSHGRLAFAGRAL 182 (540)
T ss_pred Cc-eEEEccch----------------hhhhhhccccCcCCCCCCCCCCeEEEEECCCCCCCCCEEEecHHHHHHHHHHH
Confidence 22 22332211 12222221111112223567999999999999999999999999998877766
Q ss_pred hhhhhhccccCCCCCEEEEeCChhhHHHHHH-HHHhhhcCcEEEEeCC-CHHHHHHHHHhhCCeEEEeCcHHHHHHHHHH
Q 014951 160 DQMFVVTGKVCSEEDTYFSFLPLAHIYDQII-ETHCIHKGCSIGFWRG-DVRYLMEDIQELKPTMFSGVPRVYDRIYTGI 237 (415)
Q Consensus 160 ~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~-~~~~l~~G~~vv~~~~-~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~ 237 (415)
...+ .+..+|+++..+|++|.+++.. .+.++..|+++++.+. ++..+++.++++++|++..+|..+..++...
T Consensus 183 ~~~~-----~~~~~d~~l~~~p~~~~~~~~~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~vt~~~~~p~~l~~l~~~~ 257 (540)
T PRK13388 183 TERF-----GLTRDDVCYVSMPLFHSNAVMAGWAPAVASGAAVALPAKFSASGFLDDVRRYGATYFNYVGKPLAYILATP 257 (540)
T ss_pred HHHh-----CCCCCCEEEEeeCchhhcchHHHHHHHHHcCcEEEECCCCCHHHHHHHHHHhCCeEEEehHHHHHHHHhCC
Confidence 6655 6788999999999999988875 4457889999988765 8999999999999999999999987765310
Q ss_pred HHhhhcCChhhHHHHHHHHHhhhhccccCCCCCCccchhhHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHHHhcCCc
Q 014951 238 SNKISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAP 317 (415)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~~G~~~~~~~~~~~~~~~~~~ 317 (415)
. ... ....+++.+ + |+++.++....+.+.++.+
T Consensus 258 ~-------------------------------------~~~--------~~~~~l~~~-~-G~~~~~~~~~~~~~~~~~~ 290 (540)
T PRK13388 258 E-------------------------------------RPD--------DADNPLRVA-F-GNEASPRDIAEFSRRFGCQ 290 (540)
T ss_pred C-------------------------------------Ccc--------ccccceEEE-E-CCCCCHHHHHHHHHHhCCc
Confidence 0 000 000256643 3 6677888888888888999
Q ss_pred eEEeeccCCCCceeeeecCCcccccCcccccccCeEEE-----------EeecCCCCCCCCCCCCCCeEEEe-cCCcccc
Q 014951 318 LTQGYGLTESCSGCFTSLADVFNMIGTVGVPMTTVEAR-----------LESVPEMGYDALSSVPRGEICLR-GNTLFSG 385 (415)
Q Consensus 318 ~~~~yG~tE~~~~~~~~~~~~~~~~~~~G~~~~g~~~~-----------i~~~~~~~~~~~~~~~~Gel~v~-~~~~~~g 385 (415)
+++.||+||++.++.... ....+++|+|++|+++. ++| +++. .....++.|||+++ |++++.|
T Consensus 291 l~~~YG~tE~~~~~~~~~---~~~~~~vG~p~~g~~i~~~~~~~~~~~~~~d-~~g~-~~~~~~~~GEl~v~~g~~~~~g 365 (540)
T PRK13388 291 VEDGYGSSEGAVIVVREP---GTPPGSIGRGAPGVAIYNPETLTECAVARFD-AHGA-LLNADEAIGELVNTAGAGFFEG 365 (540)
T ss_pred eecccccccccceeecCC---CCCCCCCCCCCCCcEEEcCCCCccccceecc-Cccc-cccCCCcceEEEEecCCccccc
Confidence 999999999987665332 12347899999997653 222 2222 12234578999998 9999999
Q ss_pred ccCCchhhhhhhcCCceecCceEEEcCCCC
Q 014951 386 YYKRPDLTEEVIVDGWFHTGDIGEWQPMEL 415 (415)
Q Consensus 386 Y~~~~~~~~~~~~~g~~~TGDlg~~d~~G~ 415 (415)
|+++++.+.+.|.+|||+|||+|++|+||+
T Consensus 366 Y~~~~~~t~~~~~~g~~~TGD~~~~~~dg~ 395 (540)
T PRK13388 366 YYNNPEATAERMRHGMYWSGDLAYRDADGW 395 (540)
T ss_pred ccCChHHHHHHhhcCceeccceEEEcCCCc
Confidence 999999999999899999999999999985
No 83
>PRK07059 Long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=2.6e-45 Score=361.16 Aligned_cols=365 Identities=24% Similarity=0.381 Sum_probs=271.5
Q ss_pred CccCCCCCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEcCCChhhhhhcCccCCCC
Q 014951 1 MRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLY 80 (415)
Q Consensus 1 L~~~Gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~ 80 (415)
|.+.|+++||+|+++++|+++++++++||+++|++++|++|..+.+++.++++.++++++|+++.....+...... ..
T Consensus 65 L~~~gi~~gd~V~i~~~n~~~~~~~~la~~~~G~~~v~v~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~--~~ 142 (557)
T PRK07059 65 LQSRGLAKGARVAIMMPNVLQYPVAIAAVLRAGYVVVNVNPLYTPRELEHQLKDSGAEAIVVLENFATTVQQVLAK--TA 142 (557)
T ss_pred HHHhCCCCCCEEEEECCCCHHHHHHHHHHHhcCeEEeccCcccCHHHHHHHHHccCceEEEEchhhHHHHHHhhcc--cC
Confidence 3567999999999999999999999999999999999999999999999999999999999988765544333221 11
Q ss_pred ccEEEEecCCCc-hhhH------------Hh-hhcCceeecHHHHHhcC-CCCCCCCCCCCCCeEEEEecCCCCCCCceE
Q 014951 81 LKTIVSFANVSS-SQKK------------EA-EELGVSCFSWEEFLQLG-TLDCELPPKKKTNISTIMYTSGTTGEPKGV 145 (415)
Q Consensus 81 ~~~v~~~~~~~~-~~~~------------~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v 145 (415)
.+.++....... .... .. .........+++..... ..........++++++++|||||||.||+|
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~il~TSGTTG~PK~v 222 (557)
T PRK07059 143 VKHVVVASMGDLLGFKGHIVNFVVRRVKKMVPAWSLPGHVRFNDALAEGARQTFKPVKLGPDDVAFLQYTGGTTGVSKGA 222 (557)
T ss_pred CceeEEecccccccccccccccccccccccccccCCCCcccHHHHhhccCCCCCCCCCCCcCceEEEEeCCCCCCCCcEE
Confidence 223322211000 0000 00 00001123344444332 112223445678999999999999999999
Q ss_pred EeecHHHHHHhhhhhhhhhh--ccccCCCCCEEEEeCChhhHHHHHH-HHHhhhcCcEEEEeCC--CHHHHHHHHHhhCC
Q 014951 146 VLTNQAIVAEVLSVDQMFVV--TGKVCSEEDTYFSFLPLAHIYDQII-ETHCIHKGCSIGFWRG--DVRYLMEDIQELKP 220 (415)
Q Consensus 146 ~~th~~l~~~~~~~~~~~~~--~~~~~~~~d~~l~~~p~~~~~~~~~-~~~~l~~G~~vv~~~~--~~~~~~~~i~~~~~ 220 (415)
+++|.++..++......+.. ..........+++.+|++|.+++.. .+.++..|++.++.+. ++..+++.++++++
T Consensus 223 ~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~v 302 (557)
T PRK07059 223 TLLHRNIVANVLQMEAWLQPAFEKKPRPDQLNFVCALPLYHIFALTVCGLLGMRTGGRNILIPNPRDIPGFIKELKKYQV 302 (557)
T ss_pred EeecHHHHHHHHHHhhhhcccccccCCCCCcEEEEeCCcHHHHHHHHHHHHHHhhcceEEEecCCcCHHHHHHHHHHhCC
Confidence 99999998765433222110 0001123457788999999988764 5667888888776654 88999999999999
Q ss_pred eEEEeCcHHHHHHHHHHHHhhhcCChhhHHHHHHHHHhhhhccccCCCCCCccchhhHHHHHHHHHHhCCceeEEEEecC
Q 014951 221 TMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAA 300 (415)
Q Consensus 221 t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~~G~ 300 (415)
|.+.++|.++..+.... .....++ +++|.++.||+
T Consensus 303 t~~~~~p~~~~~l~~~~-------------------------------------~~~~~~~--------~~l~~~~~gg~ 337 (557)
T PRK07059 303 HIFPAVNTLYNALLNNP-------------------------------------DFDKLDF--------SKLIVANGGGM 337 (557)
T ss_pred eeeecCHHHHHHHHcCc-------------------------------------CcCcCCc--------hhheEEEeccc
Confidence 99999999998875410 0011111 37899999999
Q ss_pred CCCHHHHHHHHHhcCCceEEeeccCCCCceeeeecCCcccccCcccccccCeEEEEeecCCCCCCCCCCCCCCeEEEecC
Q 014951 301 PLPIHVEEFLRVTSGAPLTQGYGLTESCSGCFTSLADVFNMIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGN 380 (415)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~G~~~~g~~~~i~~~~~~~~~~~~~~~~Gel~v~~~ 380 (415)
++++.+.+.+.+.++.++++.||+||++.++...........+++|.|+++++++|++ +++. +++.|+.|||+++|+
T Consensus 338 ~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~vG~p~~g~~v~i~d-~~~~--~~~~g~~Gel~v~g~ 414 (557)
T PRK07059 338 AVQRPVAERWLEMTGCPITEGYGLSETSPVATCNPVDATEFSGTIGLPLPSTEVSIRD-DDGN--DLPLGEPGEICIRGP 414 (557)
T ss_pred cCCHHHHHHHHHHhCCCeeeccccccccchhhcCCCCCCCcCCcccCccCCcEEEEEC-CCCC--CCCCCCceEEEEeCC
Confidence 9999999999988999999999999998876655443333458999999999999999 6664 455679999999999
Q ss_pred CccccccCCchhhhhhh-cCCceecCceEEEcCCCC
Q 014951 381 TLFSGYYKRPDLTEEVI-VDGWFHTGDIGEWQPMEL 415 (415)
Q Consensus 381 ~~~~gY~~~~~~~~~~~-~~g~~~TGDlg~~d~~G~ 415 (415)
.++.||+++++.+.+.| .+|||+|||+|++|+||+
T Consensus 415 ~~~~gY~~~~~~~~~~~~~~g~~~TGDl~~~~~~g~ 450 (557)
T PRK07059 415 QVMAGYWNRPDETAKVMTADGFFRTGDVGVMDERGY 450 (557)
T ss_pred ccchhhhcCHHHHhhhcccCCceecCcEEEEcCCCc
Confidence 99999999999998888 689999999999999985
No 84
>PRK12476 putative fatty-acid--CoA ligase; Provisional
Probab=100.00 E-value=6.8e-46 Score=368.39 Aligned_cols=338 Identities=19% Similarity=0.242 Sum_probs=251.0
Q ss_pred CCCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEec-CCCCC--HHHHHHHHHhcCceEEEEcCCChhhhhhcCccCC-CCc
Q 014951 6 VNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPL-YDTLG--ANAVEFIINHAEVSIAFVQENKIPSILSCLPRCC-LYL 81 (415)
Q Consensus 6 v~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l-~~~~~--~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~-~~~ 81 (415)
+++||+|+++++|+++++++++||+++|++++|+ ++.++ .+++.+++++++++++|++++..+.+........ ...
T Consensus 89 ~~~gd~V~l~~~n~~e~~~~~lA~~~aG~v~vpl~~~~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~ 168 (612)
T PRK12476 89 AGPGDRVAILAPQGIDYVAGFFAAIKAGTIAVPLFAPELPGHAERLDTALRDAEPTVVLTTTAAAEAVEGFLRNLPRLRR 168 (612)
T ss_pred cCCCCEEEEECCCChhHHHHHHHHHHcCceeEecCCCCcchhHHHHHHHHHhCCCCEEEEcHHHHHHHHHHHhhcccccC
Confidence 8999999999999999999999999999999999 57776 7899999999999999998876655433221110 011
Q ss_pred cEEEEecCCCchhhHHhhhcCceeecHHHHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEeecHHHHHHhhhhhh
Q 014951 82 KTIVSFANVSSSQKKEAEELGVSCFSWEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQ 161 (415)
Q Consensus 82 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~~~~~ 161 (415)
..++.++.... ............++++++|+|||||||.||||++||+++..++.....
T Consensus 169 ~~~i~~~~~~~---------------------~~~~~~~~~~~~~~d~a~i~yTSGTTG~PKgV~~sh~~l~~~~~~~~~ 227 (612)
T PRK12476 169 PRVIAIDAIPD---------------------SAGESFVPVELDTDDVSHLQYTSGSTRPPVGVEITHRAVGTNLVQMIL 227 (612)
T ss_pred ceEEEeccccc---------------------cccccccCCCCCCCceEEEEeCCCCCCCCceEEeeHHHHHHHHHHHHH
Confidence 23343332110 000011122346789999999999999999999999999877665444
Q ss_pred hhhhcccc-CCCCCEEEEeCChhhHHHHHHHHHhhhcCcEEEEeCC-----CHHHHHHHHH--hhCCeEEEeCcHHHHHH
Q 014951 162 MFVVTGKV-CSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG-----DVRYLMEDIQ--ELKPTMFSGVPRVYDRI 233 (415)
Q Consensus 162 ~~~~~~~~-~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~vv~~~~-----~~~~~~~~i~--~~~~t~~~~~P~~~~~l 233 (415)
.+ . +.+++++++++|++|.+++...+.+++.|+++++... ++..+++.++ +++++.++.+|+++..+
T Consensus 228 ~~-----~~~~~~~~~l~~~Pl~h~~g~~~~~~~~~~gg~~~~~~~~~~~~~p~~~~~~i~~~~~~~t~~~~~P~~~~~l 302 (612)
T PRK12476 228 SI-----DLLDRNTHGVSWLPLYHDMGLSMIGFPAVYGGHSTLMSPTAFVRRPQRWIKALSEGSRTGRVVTAAPNFAYEW 302 (612)
T ss_pred Hh-----ccCCCCceEEEeCCcccccchHHHHHHHhcCCeEEEECHHHHHHHHHHHHHHHhhhccCCeEEEeCCcHHHHH
Confidence 33 4 5778999999999999998765555555555555432 7889999995 58999999999988877
Q ss_pred HHHHHHhhhcCChhhHHHHHHHHHhhhhccccCCCCCCccchhhHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHHHh
Q 014951 234 YTGISNKISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVT 313 (415)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~~G~~~~~~~~~~~~~~ 313 (415)
+...... ......++ +++| +++||+++++++.+++.+.
T Consensus 303 ~~~~~~~---------------------------------~~~~~~~l--------~~lr-~~~gg~~~~~~~~~~~~~~ 340 (612)
T PRK12476 303 AAQRGLP---------------------------------AEGDDIDL--------SNVV-LIIGSEPVSIDAVTTFNKA 340 (612)
T ss_pred HHHhcCh---------------------------------hhhcCcch--------hHhe-EEecccCCCHHHHHHHHHH
Confidence 5411000 00000111 3789 9999999999999999887
Q ss_pred c---CC---ceEEeeccCCCCceeeeecCCcc--------------------------cccCcccccccCeEEEEeecCC
Q 014951 314 S---GA---PLTQGYGLTESCSGCFTSLADVF--------------------------NMIGTVGVPMTTVEARLESVPE 361 (415)
Q Consensus 314 ~---~~---~~~~~yG~tE~~~~~~~~~~~~~--------------------------~~~~~~G~~~~g~~~~i~~~~~ 361 (415)
+ |. .+++.||+||++..+....++.. ...+++|+|++|++++|+| ++
T Consensus 341 ~~~~g~~~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~G~~~~g~~v~ivd-~~ 419 (612)
T PRK12476 341 FAPYGLPRTAFKPSYGIAEATLFVATIAPDAEPSVVYLDREQLGAGRAVRVAADAPNAVAHVSCGQVARSQWAVIVD-PD 419 (612)
T ss_pred HHhcCCCccccccccchhhhheeeeccCCCCCceEEEEcHHHhhCCCeeecCCCCCCcceeEeCCCcCCCCEEEEEe-CC
Confidence 7 43 48999999998765543221100 0125889999999999999 66
Q ss_pred -CCCCCCCCCCCCeEEEecCCccccccCCchhhhhhhc-------------------CCceecCceEEEcCCCC
Q 014951 362 -MGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVIV-------------------DGWFHTGDIGEWQPMEL 415 (415)
Q Consensus 362 -~~~~~~~~~~~Gel~v~~~~~~~gY~~~~~~~~~~~~-------------------~g~~~TGDlg~~d~~G~ 415 (415)
+.. ++.|+.|||+++|++++.|||++|+.|.++|. ++||+|||+|+++ ||+
T Consensus 420 ~g~~--~~~g~~GEl~v~g~~v~~GY~~~~~~t~~~f~~~~~~~~~~g~~~~~~~~~~~w~~TGDlg~~~-dG~ 490 (612)
T PRK12476 420 TGAE--LPDGEVGEIWLHGDNIGRGYWGRPEETERTFGAKLQSRLAEGSHADGAADDGTWLRTGDLGVYL-DGE 490 (612)
T ss_pred CCcC--CCCCCEEEEEEcCCcccccccCChHHHHHHHhhhhccccccccccccccCCCCeeeccccceeE-CCE
Confidence 544 45679999999999999999999999998883 2599999999985 774
No 85
>PRK12583 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=5.4e-45 Score=359.41 Aligned_cols=352 Identities=25% Similarity=0.423 Sum_probs=272.8
Q ss_pred CccCCCCCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEcCCCh-----hhhhhcCc
Q 014951 1 MRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKI-----PSILSCLP 75 (415)
Q Consensus 1 L~~~Gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~-----~~~~~~~~ 75 (415)
|.+.|+++||+|+++++|+++++++++||+++|++++++++.++.+++..++++++++++|+++... ..+.....
T Consensus 62 L~~~gi~~g~~V~i~~~~~~~~~~~~~a~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~ 141 (558)
T PRK12583 62 LLALGVQPGDRVGIWAPNCAEWLLTQFATARIGAILVNINPAYRASELEYALGQSGVRWVICADAFKTSDYHAMLQELLP 141 (558)
T ss_pred HHHhCCCCCCEEEEECCCChHHHHHHHHHHhhCCEEEecCCCCCHHHHHHHHHhcCCcEEEEeccccccchhHHHHHHhh
Confidence 3467999999999999999999999999999999999999999999999999999999999986432 11111111
Q ss_pred c------------CCCCccEEEEecCCCchhhHHhhhcCceeecHHHHHhcCCC------CCCCCCCCCCCeEEEEecCC
Q 014951 76 R------------CCLYLKTIVSFANVSSSQKKEAEELGVSCFSWEEFLQLGTL------DCELPPKKKTNISTIMYTSG 137 (415)
Q Consensus 76 ~------------~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~i~~TSG 137 (415)
. ..+....++..+.... .....|++....+.. ........++++++++||||
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSG 211 (558)
T PRK12583 142 GLAEGQPGALACERLPELRGVVSLAPAPP----------PGFLAWHELQARGETVSREALAERQASLDRDDPINIQYTSG 211 (558)
T ss_pred hhccccccccccccCCcceEEEEecCCCC----------ccccchHhhhhcccccccccccccccccCCCCcEEEEECCC
Confidence 0 0122233333322111 112334443322210 11122345788999999999
Q ss_pred CCCCCceEEeecHHHHHHhhhhhhhhhhccccCCCCCEEEEeCChhhHHHHHH-HHHhhhcCcEEEEeCC--CHHHHHHH
Q 014951 138 TTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQII-ETHCIHKGCSIGFWRG--DVRYLMED 214 (415)
Q Consensus 138 tTG~pK~v~~th~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~-~~~~l~~G~~vv~~~~--~~~~~~~~ 214 (415)
|||.||+|.++|.++..++......+ .+..+|++++..|++|.++... ++.+++.|+++++... ++..+++.
T Consensus 212 sTG~PK~v~~s~~~l~~~~~~~~~~~-----~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~v~~~~~~~~~~~~~~~ 286 (558)
T PRK12583 212 TTGFPKGATLSHHNILNNGYFVAESL-----GLTEHDRLCVPVPLYHCFGMVLANLGCMTVGACLVYPNEAFDPLATLQA 286 (558)
T ss_pred CCCCCceEEeeHHHHHHHHHHHHHHh-----CCCCCCeEEEecCchhhhhHHHHHHHHHhcCceEEeecCCCCHHHHHHH
Confidence 99999999999999988887765555 6778999999999999999875 6778999999887643 89999999
Q ss_pred HHhhCCeEEEeCcHHHHHHHHHHHHhhhcCChhhHHHHHHHHHhhhhccccCCCCCCccchhhHHHHHHHHHHhCCceeE
Q 014951 215 IQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQA 294 (415)
Q Consensus 215 i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~ 294 (415)
++++++|+++++|+++..++.... ....++ +++|.
T Consensus 287 i~~~~~t~l~~~P~~~~~l~~~~~-------------------------------------~~~~~~--------~~lr~ 321 (558)
T PRK12583 287 VEEERCTALYGVPTMFIAELDHPQ-------------------------------------RGNFDL--------SSLRT 321 (558)
T ss_pred HHHcCCeEEeccHHHHHHHHcccc-------------------------------------ccCCCc--------hhheE
Confidence 999999999999999876643110 000011 37999
Q ss_pred EEEecCCCCHHHHHHHHHhcCC-ceEEeeccCCCCceeeeecCCc--ccccCcccccccCeEEEEeecCCCCCCCCCCCC
Q 014951 295 MLSGAAPLPIHVEEFLRVTSGA-PLTQGYGLTESCSGCFTSLADV--FNMIGTVGVPMTTVEARLESVPEMGYDALSSVP 371 (415)
Q Consensus 295 v~~~G~~~~~~~~~~~~~~~~~-~~~~~yG~tE~~~~~~~~~~~~--~~~~~~~G~~~~g~~~~i~~~~~~~~~~~~~~~ 371 (415)
+++||+++++++.+++.+.++. .+++.||+||++.++....... .....++|+|++++.++|+| +++ .+++.|+
T Consensus 322 i~~~G~~~~~~~~~~~~~~~~~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~vG~p~~~~~~~i~d-~~~--~~~~~g~ 398 (558)
T PRK12583 322 GIMAGAPCPIEVMRRVMDEMHMAEVQIAYGMTETSPVSLQTTAADDLERRVETVGRTQPHLEVKVVD-PDG--ATVPRGE 398 (558)
T ss_pred EEecCCCCCHHHHHHHHHHcCCcceeccccccccccceeccCcccccccccCCCCccCCCCeEEEEC-CCC--CCCCCCC
Confidence 9999999999999999888864 7999999999998766543221 22357899999999999999 665 4566779
Q ss_pred CCeEEEecCCccccccCCchhhhhhh-cCCceecCceEEEcCCCC
Q 014951 372 RGEICLRGNTLFSGYYKRPDLTEEVI-VDGWFHTGDIGEWQPMEL 415 (415)
Q Consensus 372 ~Gel~v~~~~~~~gY~~~~~~~~~~~-~~g~~~TGDlg~~d~~G~ 415 (415)
.|||+++|+.++.||+++++.+.+.| .++||+|||+|++|+||+
T Consensus 399 ~Gel~v~g~~~~~gy~~~~~~~~~~~~~~~~~~TGDl~~~~~dg~ 443 (558)
T PRK12583 399 IGELCTRGYSVMKGYWNNPEATAESIDEDGWMHTGDLATMDEQGY 443 (558)
T ss_pred eeEEEEEeCccchhhcCChHHHHhhcCCCCCeeccceEEECCCcc
Confidence 99999999999999999999998888 789999999999999985
No 86
>PRK13383 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=3.3e-45 Score=357.08 Aligned_cols=334 Identities=20% Similarity=0.219 Sum_probs=257.9
Q ss_pred CccCCCCCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEcCCChhhhhhcCccCCCC
Q 014951 1 MRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLY 80 (415)
Q Consensus 1 L~~~Gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~ 80 (415)
|++.|+++||+|+++++|++++++++|||+++|++++|+++.++.+++.++++.++++.+|++++....+....
T Consensus 77 L~~~gi~~g~~V~i~~~~~~~~~~~~la~~~~G~v~vpl~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~------ 150 (516)
T PRK13383 77 LTRDGVAPGRAVGVMCRNGRGFVTAVFAVGLLGADVVPISTEFRSDALAAALRAHHISTVVADNEFAERIAGAD------ 150 (516)
T ss_pred HHhcCCCCCCEEEEECCCCHHHHHHHHHHHHhCeEEEEcCccCCHHHHHHHHhcCCCCEEEEchhHHHHHHhhh------
Confidence 45679999999999999999999999999999999999999999999999999999999999887655443311
Q ss_pred ccEEEEecCCCchhhHHhhhcCceeecHHHHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEeecHHHHHHhhhhh
Q 014951 81 LKTIVSFANVSSSQKKEAEELGVSCFSWEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVD 160 (415)
Q Consensus 81 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~~~~ 160 (415)
..++.++... .... .....+...++.++++|||||||.||+|.++|.... ......
T Consensus 151 -~~~~~~~~~~-----------------~~~~-----~~~~~p~~~~~~~~il~TSGTTG~PK~v~~s~~~~~-~~~~~~ 206 (516)
T PRK13383 151 -DAVAVIDPAT-----------------AGAE-----ESGGRPAVAAPGRIVLLTSGTTGKPKGVPRAPQLRS-AVGVWV 206 (516)
T ss_pred -cceEEeccch-----------------hhhh-----cCCCCCCCCCCCcEEEECCCCCCCCCeeeecchhhh-hhhhHH
Confidence 1122222110 0000 000112234567899999999999999999997432 111111
Q ss_pred hhhhhccccCCCCCEEEEeCChhhHHHHHHHHHhhhcCcEEEEeCC-CHHHHHHHHHhhCCeEEEeCcHHHHHHHHHHHH
Q 014951 161 QMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG-DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISN 239 (415)
Q Consensus 161 ~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~vv~~~~-~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~ 239 (415)
... ....+..+|+++..+|++|.+++...+.++..|+++++... ++..+++.++++++|.+.++|.++..+.+....
T Consensus 207 ~~~--~~~~~~~~d~~~~~~pl~h~~g~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~ 284 (516)
T PRK13383 207 TIL--DRTRLRTGSRISVAMPMFHGLGLGMLMLTIALGGTVLTHRHFDAEAALAQASLHRADAFTAVPVVLARILELPPR 284 (516)
T ss_pred hHH--hhhccCCCCeEEEecCCcchhhHHHHHHHHhcCCEEEECCCCCHHHHHHHHHHhCCcEEEecHHHHHHHHhcccc
Confidence 111 11256789999999999999999877788999999988765 999999999999999999999999887642110
Q ss_pred hhhcCChhhHHHHHHHHHhhhhccccCCCCCCccchhhHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHHHhcCCceE
Q 014951 240 KISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLT 319 (415)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~~G~~~~~~~~~~~~~~~~~~~~ 319 (415)
.. ... ..+++|.+++||+++++++.+++.+.++..++
T Consensus 285 ~~-----------------------------------~~~--------~~~~lr~i~~gG~~l~~~~~~~~~~~~g~~v~ 321 (516)
T PRK13383 285 VR-----------------------------------ARN--------PLPQLRVVMSSGDRLDPTLGQRFMDTYGDILY 321 (516)
T ss_pred cc-----------------------------------ccC--------CCCceEEEEECCCCCCHHHHHHHHHHcCchhh
Confidence 00 000 01379999999999999999999999999999
Q ss_pred EeeccCCCCceeeeecCCcccccCcccccccCeEEEEeecCCCCCCCCCCCCCCeEEEecCCccccccCCchhhhhhhcC
Q 014951 320 QGYGLTESCSGCFTSLADVFNMIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVIVD 399 (415)
Q Consensus 320 ~~yG~tE~~~~~~~~~~~~~~~~~~~G~~~~g~~~~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gY~~~~~~~~~~~~~ 399 (415)
+.||+||++..+...........+++|+|+++++++|+| +++. +++.++.|||+++|+.++.||++++. ..+.+
T Consensus 322 ~~YG~tE~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d-~~~~--~~~~g~~Gel~v~g~~~~~~Y~~~~~---~~~~~ 395 (516)
T PRK13383 322 NGYGSTEVGIGALATPADLRDAPETVGKPVAGCPVRILD-RNNR--PVGPRVTGRIFVGGELAGTRYTDGGG---KAVVD 395 (516)
T ss_pred hcccccccccceeccccccccCCCcccCCCCCcEEEEEC-CCCC--CCCCCCceEEEEecCcccccccCCch---hheec
Confidence 999999998665544333233457899999999999999 6664 45567999999999999999998764 33468
Q ss_pred CceecCceEEEcCCCC
Q 014951 400 GWFHTGDIGEWQPMEL 415 (415)
Q Consensus 400 g~~~TGDlg~~d~~G~ 415 (415)
|||+|||+|++|++|+
T Consensus 396 g~~~TGDl~~~d~~G~ 411 (516)
T PRK13383 396 GMTSTGDMGYLDNAGR 411 (516)
T ss_pred CceecceeEEEcCCcc
Confidence 9999999999999985
No 87
>PRK12316 peptide synthase; Provisional
Probab=100.00 E-value=1.5e-45 Score=428.06 Aligned_cols=336 Identities=20% Similarity=0.273 Sum_probs=271.5
Q ss_pred CccCCCCCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEcCCChhhhhhcCccCCCC
Q 014951 1 MRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLY 80 (415)
Q Consensus 1 L~~~Gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~ 80 (415)
|++.|+++||+|+++++|++++++++|||+++|++++||+|.++.+++.+++++++++++|++.+....+... ..
T Consensus 2045 L~~~gv~~g~~V~l~~~~s~~~~~~~lAil~aGa~~vpld~~~p~~rl~~il~~~~~~~vl~~~~~~~~~~~~-----~~ 2119 (5163)
T PRK12316 2045 LRARGVGPEVRVAIAAERSFELVVALLAVLKAGGAYVPLDPNYPAERLAYMLEDSGAALLLTQRHLLERLPLP-----AG 2119 (5163)
T ss_pred HHHcCCCCCCEEEEEeCCCHHHHHHHHHHHhhceEEeecCCCCCHHHHHHHHHhcCCCEEEeChhhhhhcccc-----cc
Confidence 4578999999999999999999999999999999999999999999999999999999999988755433210 01
Q ss_pred ccEEEEecCCCchhhHHhhhcCceeecHHHHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEeecHHHHHHhhhhh
Q 014951 81 LKTIVSFANVSSSQKKEAEELGVSCFSWEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVD 160 (415)
Q Consensus 81 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~~~~ 160 (415)
. ..+.++.. ... .......+.....++++++|+|||||||.||||+++|+++.+.+....
T Consensus 2120 ~-~~~~~~~~------------------~~~-~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~~h~~l~~~~~~~~ 2179 (5163)
T PRK12316 2120 V-ARLPLDRD------------------AEW-ADYPDTAPAVQLAGENLAYVIYTSGSTGLPKGVAVSHGALVAHCQAAG 2179 (5163)
T ss_pred c-ceEeccch------------------hhh-hccCccCCCCCCCCCCeEEEEeCccCCCCCCEeEEccHHHHHHHHHHH
Confidence 1 11111110 000 000111122345789999999999999999999999999999998877
Q ss_pred hhhhhccccCCCCCEEEEeCChhhHHHHHHHHHhhhcCcEEEEeCC---CHHHHHHHHHhhCCeEEEeCcHHHHHHHHHH
Q 014951 161 QMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG---DVRYLMEDIQELKPTMFSGVPRVYDRIYTGI 237 (415)
Q Consensus 161 ~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~vv~~~~---~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~ 237 (415)
..+ .+.+.|+++.+.|++|..++..++.+++.|+++++.+. ++..+++.|+++++|+++++|++++.+.+..
T Consensus 2180 ~~~-----~~~~~d~~l~~~~~~fd~~~~~~~~~L~~G~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~ 2254 (5163)
T PRK12316 2180 ERY-----ELSPADCELQFMSFSFDGAHEQWFHPLLNGARVLIRDDELWDPEQLYDEMERHGVTILDFPPVYLQQLAEHA 2254 (5163)
T ss_pred Hhc-----CCCCcceEEEecCchHHHHHHHHHHHHhCCCEEEeCCcccCCHHHHHHHHHHcCCeEEEcChHHHHHHHhhh
Confidence 766 78899999999999999888889999999999977654 7899999999999999999999999876521
Q ss_pred HHhhhcCChhhHHHHHHHHHhhhhccccCCCCCCccchhhHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHHHhc-CC
Q 014951 238 SNKISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTS-GA 316 (415)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~~G~~~~~~~~~~~~~~~-~~ 316 (415)
... ....+||.+++|||++++++.+.|.+.+ +.
T Consensus 2255 ~~~----------------------------------------------~~~~~lr~~~~gGe~l~~~~~~~~~~~~~~~ 2288 (5163)
T PRK12316 2255 ERD----------------------------------------------GRPPAVRVYCFGGEAVPAASLRLAWEALRPV 2288 (5163)
T ss_pred hcc----------------------------------------------cCCcceeEEEEecccCCHHHHHHHHHhCCCc
Confidence 100 0002799999999999999999988765 57
Q ss_pred ceEEeeccCCCCceeeeecCCccc----ccCcccccccCeEEEEeecCCCCCCCCCCCCCCeEEEecCCccccccCCchh
Q 014951 317 PLTQGYGLTESCSGCFTSLADVFN----MIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDL 392 (415)
Q Consensus 317 ~~~~~yG~tE~~~~~~~~~~~~~~----~~~~~G~~~~g~~~~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gY~~~~~~ 392 (415)
++++.||+||++..++........ ...++|+|++|++++|+| +++. +++.|+.|||+|+|+++++||+++|++
T Consensus 2289 ~l~n~YG~TE~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~i~d-~~~~--~vp~g~~GEl~i~G~~v~~GY~~~p~~ 2365 (5163)
T PRK12316 2289 YLFNGYGPTEAVVTPLLWKCRPQDPCGAAYVPIGRALGNRRAYILD-ADLN--LLAPGMAGELYLGGEGLARGYLNRPGL 2365 (5163)
T ss_pred EEEECccchhheeeeeeeecccccccCCCcCCcccccCCCEEEEEC-CCCC--CCCCCCeeEEEecchhhcccccCChhh
Confidence 899999999998776544332221 125799999999999999 6665 455679999999999999999999999
Q ss_pred hhhhh-c-------CCceecCceEEEcCCCC
Q 014951 393 TEEVI-V-------DGWFHTGDIGEWQPMEL 415 (415)
Q Consensus 393 ~~~~~-~-------~g~~~TGDlg~~d~~G~ 415 (415)
|.++| . ++||||||+|++|+||+
T Consensus 2366 T~~~f~~~~~~~~~~~~yrTGDl~~~~~dG~ 2396 (5163)
T PRK12316 2366 TAERFVPDPFSASGERLYRTGDLARYRADGV 2396 (5163)
T ss_pred hhhhccCCCCCCCCCeeEecccEEEEcCCCc
Confidence 99998 2 35999999999999985
No 88
>PRK06018 putative acyl-CoA synthetase; Provisional
Probab=100.00 E-value=7.7e-45 Score=356.49 Aligned_cols=355 Identities=20% Similarity=0.284 Sum_probs=271.8
Q ss_pred CccCCCCCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEcCCChhhhhhcCccCCCC
Q 014951 1 MRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLY 80 (415)
Q Consensus 1 L~~~Gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~ 80 (415)
|.++|+++||+|+++++|+++++++++||+++|++++|+++.++.+++..+++.++++.+|++.+..+.+.+..... +.
T Consensus 56 L~~~g~~~gd~v~i~~~~~~~~~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~-~~ 134 (542)
T PRK06018 56 LDRDGIKLGDRVATIAWNTWRHLEAWYGIMGIGAICHTVNPRLFPEQIAWIINHAEDRVVITDLTFVPILEKIADKL-PS 134 (542)
T ss_pred HHHcCCCCCCEEEEEcCCchHHHHHHHHHHhcCeEeeccccccCHHHHHHHHhccCCCEEEEccccHHHHHHHHhhC-CC
Confidence 45689999999999999999999999999999999999999999999999999999999999988777665543322 33
Q ss_pred ccEEEEecCCCchhhHHhhhcCceeecHHHHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEeecHHHH-HHh-hh
Q 014951 81 LKTIVSFANVSSSQKKEAEELGVSCFSWEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIV-AEV-LS 158 (415)
Q Consensus 81 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~th~~l~-~~~-~~ 158 (415)
.+.++...+...... ........+++++..............+++++++|||||||.||+|++||++.+ ... ..
T Consensus 135 ~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~ 210 (542)
T PRK06018 135 VERYVVLTDAAHMPQ----TTLKNAVAYEEWIAEADGDFAWKTFDENTAAGMCYTSGTTGDPKGVLYSHRSNVLHALMAN 210 (542)
T ss_pred ccEEEEecccccccc----cCccccccHHHHhccCCcccCcccCCccceeeEEecCCCCCCCcEEEEechhHHHHHHHHh
Confidence 445554432211000 000123355666544322222234566889999999999999999999999743 222 22
Q ss_pred hhhhhhhccccCCCCCEEEEeCChhhHHHHHHHHHhhhcCcEEEEeCC--CHHHHHHHHHhhCCeEEEeCcHHHHHHHHH
Q 014951 159 VDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTMFSGVPRVYDRIYTG 236 (415)
Q Consensus 159 ~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~vv~~~~--~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~ 236 (415)
....+ .+..+|+++...|++|.+++...+.+++.|+++++... ++..+++.++++++|++.++|+++..+++.
T Consensus 211 ~~~~~-----~~~~~d~~~~~~p~~h~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~ 285 (542)
T PRK06018 211 NGDAL-----GTSAADTMLPVVPLFHANSWGIAFSAPSMGTKLVMPGAKLDGASVYELLDTEKVTFTAGVPTVWLMLLQY 285 (542)
T ss_pred hhhhc-----CCCCCCEEEEecCHHHHhhhHHHHhhhhcCceEEccCcCCCHHHHHHHHHhcCCceeecCcHHHHHHHhc
Confidence 22222 57789999999999999988877778899999988753 889999999999999999999999988653
Q ss_pred HHHhhhcCChhhHHHHHHHHHhhhhccccCCCCCCccchhhHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHHHhcCC
Q 014951 237 ISNKISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGA 316 (415)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~~G~~~~~~~~~~~~~~~~~ 316 (415)
.... ..++ +++|.++++|+++++++.+++++ ++.
T Consensus 286 ~~~~-------------------------------------~~~~--------~~lr~~~~~G~~l~~~~~~~~~~-~~~ 319 (542)
T PRK06018 286 MEKE-------------------------------------GLKL--------PHLKMVVCGGSAMPRSMIKAFED-MGV 319 (542)
T ss_pred cccc-------------------------------------CCCc--------ccceEEEEcCCCCCHHHHHHHHH-hCC
Confidence 2110 0001 37999999999999999999998 899
Q ss_pred ceEEeeccCCCCceeeeec-CCcc---------cccCcccccccCeEEEEeecCCCCCCCCCCCCCCeEEEecCCccccc
Q 014951 317 PLTQGYGLTESCSGCFTSL-ADVF---------NMIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGY 386 (415)
Q Consensus 317 ~~~~~yG~tE~~~~~~~~~-~~~~---------~~~~~~G~~~~g~~~~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gY 386 (415)
++++.||+||++.+..... .... ....++|+|.+|++++|+| +++...+.+.+..|||+++|+.++.||
T Consensus 320 ~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~g~~i~v~d-~~~~~~~~~~~~~Gel~i~g~~~~~gy 398 (542)
T PRK06018 320 EVRHAWGMTEMSPLGTLAALKPPFSKLPGDARLDVLQKQGYPPFGVEMKITD-DAGKELPWDGKTFGRLKVRGPAVAAAY 398 (542)
T ss_pred CeEeeecccccCcccccccCccccccCCchhhhhccccCCCCCCCcEEEEEC-CCCCCCCCCCCceeEEEEecCCcchhh
Confidence 9999999999987654332 1110 1135789999999999999 777767665557899999999999999
Q ss_pred cCCchhhhhhh-cCCceecCceEEEcCCCC
Q 014951 387 YKRPDLTEEVI-VDGWFHTGDIGEWQPMEL 415 (415)
Q Consensus 387 ~~~~~~~~~~~-~~g~~~TGDlg~~d~~G~ 415 (415)
|++. ...+ .+|||+|||+|++|+||+
T Consensus 399 ~~~~---~~~~~~~~~~~TGDl~~~~~~g~ 425 (542)
T PRK06018 399 YRVD---GEILDDDGFFDTGDVATIDAYGY 425 (542)
T ss_pred hcCc---ccEecCCcEEEcCCEEEEcCCcc
Confidence 9842 2233 589999999999999985
No 89
>PRK08751 putative long-chain fatty acyl CoA ligase; Provisional
Probab=100.00 E-value=1.1e-44 Score=357.07 Aligned_cols=362 Identities=24% Similarity=0.397 Sum_probs=269.8
Q ss_pred cCCCCCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEcCCChhhhhhcCccCCCCcc
Q 014951 3 SRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLK 82 (415)
Q Consensus 3 ~~Gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~ 82 (415)
+.|+++||+|+++++|+++++++++||+++|++++|++|.++.+++.++++.++++++|+++.....+....... ...
T Consensus 70 ~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~p~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~--~~~ 147 (560)
T PRK08751 70 ELQLKKGDRVALMMPNCLQYPIATFGVLRAGLTVVNVNPLYTPRELKHQLIDSGASVLVVIDNFGTTVQQVIADT--PVK 147 (560)
T ss_pred HhCCCCCCEEEEECCCCHHHHHHHHHHHHhCeEEeccCccCCHHHHHHHHHhcCCeEEEEcchhHHHHHHHhhCC--Ccc
Confidence 479999999999999999999999999999999999999999999999999999999999987765554433221 122
Q ss_pred EEEEecCCC--c----h-hh---HHhh----h-cCceeecHHHHHhcC-CCCCCCCCCCCCCeEEEEecCCCCCCCceEE
Q 014951 83 TIVSFANVS--S----S-QK---KEAE----E-LGVSCFSWEEFLQLG-TLDCELPPKKKTNISTIMYTSGTTGEPKGVV 146 (415)
Q Consensus 83 ~v~~~~~~~--~----~-~~---~~~~----~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~ 146 (415)
.++...... . . .. .... . .......+.+..... ..........++++++++|||||||.||+|.
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~ 227 (560)
T PRK08751 148 QVITTGLGDMLGFPKAALVNFVVKYVKKLVPEYRINGAIRFREALALGRKHSMPTLQIEPDDIAFLQYTGGTTGVAKGAM 227 (560)
T ss_pred EEEEechhhhcccccchhhhhhhhhhhccccccCCCccccHHHHHhccCCCCCCCCCCCcccEEEEEcCCCCCCCCCEEE
Confidence 333221000 0 0 00 0000 0 000112233333322 1112223456789999999999999999999
Q ss_pred eecHHHHHHhhhhhhhhhhccccCCC-CCEEEEeCChhhHHHHHH-HHHhhhcCcEEEEeCC--CHHHHHHHHHhhCCeE
Q 014951 147 LTNQAIVAEVLSVDQMFVVTGKVCSE-EDTYFSFLPLAHIYDQII-ETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTM 222 (415)
Q Consensus 147 ~th~~l~~~~~~~~~~~~~~~~~~~~-~d~~l~~~p~~~~~~~~~-~~~~l~~G~~vv~~~~--~~~~~~~~i~~~~~t~ 222 (415)
+||.++...+......+.... .+.. .+++++..|++|.+++.. .+..+..|+++++... ++..+++.++++++|+
T Consensus 228 ~s~~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~t~ 306 (560)
T PRK08751 228 LTHRNLVANMQQAHQWLAGTG-KLEEGCEVVITALPLYHIFALTANGLVFMKIGGCNHLISNPRDMPGFVKELKKTRFTA 306 (560)
T ss_pred EccHHHHHHHHHHHHhhcccc-ccCCCCceEEEecChHHHHHHHHhhhhHhhccceEEEecCcCCHHHHHHHHHhcceeE
Confidence 999999887765444331111 1223 467788899999999864 4556667777666543 8999999999999999
Q ss_pred EEeCcHHHHHHHHHHHHhhhcCChhhHHHHHHHHHhhhhccccCCCCCCccchhhHHHHHHHHHHhCCceeEEEEecCCC
Q 014951 223 FSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPL 302 (415)
Q Consensus 223 ~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~~G~~~ 302 (415)
+.++|.++..+.+. ......++ +++|.+++||+++
T Consensus 307 ~~~~p~~~~~l~~~-------------------------------------~~~~~~~l--------~~lr~v~~gG~~~ 341 (560)
T PRK08751 307 FTGVNTLFNGLLNT-------------------------------------PGFDQIDF--------SSLKMTLGGGMAV 341 (560)
T ss_pred ecChHHHHHHHHcC-------------------------------------cCcCCcch--------hhheeeeeCCCCC
Confidence 99999999887541 00111122 2789999999999
Q ss_pred CHHHHHHHHHhcCCceEEeeccCCCCceeeeecCCcccccCcccccccCeEEEEeecCCCCCCCCCCCCCCeEEEecCCc
Q 014951 303 PIHVEEFLRVTSGAPLTQGYGLTESCSGCFTSLADVFNMIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTL 382 (415)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~G~~~~g~~~~i~~~~~~~~~~~~~~~~Gel~v~~~~~ 382 (415)
++.+.+.+++.+++++++.||+||++..+.....+.....+++|.|+++++++|+| +++.. ++.++.|||+++|+.+
T Consensus 342 ~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~vG~~~~~~~v~i~d-~~~~~--~~~g~~Gel~v~~~~~ 418 (560)
T PRK08751 342 QRSVAERWKQVTGLTLVEAYGLTETSPAACINPLTLKEYNGSIGLPIPSTDACIKD-DAGTV--LAIGEIGELCIKGPQV 418 (560)
T ss_pred CHHHHHHHHHHhCCeEEEeeccccCCCceecccccccccCCCcCccCCCceEEEEC-CCCCC--CCCCCceEEEEecCcc
Confidence 99999999998899999999999998776554433333347899999999999999 76654 4566899999999999
Q ss_pred cccccCCchhhhhhh-cCCceecCceEEEcCCCC
Q 014951 383 FSGYYKRPDLTEEVI-VDGWFHTGDIGEWQPMEL 415 (415)
Q Consensus 383 ~~gY~~~~~~~~~~~-~~g~~~TGDlg~~d~~G~ 415 (415)
+.||+++++.+.+.| .+|||+|||+|++|++|+
T Consensus 419 ~~gy~~~~~~~~~~~~~~g~~~TGD~~~~~~~g~ 452 (560)
T PRK08751 419 MKGYWKRPEETAKVMDADGWLHTGDIARMDEQGF 452 (560)
T ss_pred chhhcCChhhhhhccccCCCccccceEEEcCCce
Confidence 999999999998888 689999999999999985
No 90
>PRK12467 peptide synthase; Provisional
Probab=100.00 E-value=2.8e-45 Score=419.67 Aligned_cols=337 Identities=19% Similarity=0.222 Sum_probs=272.6
Q ss_pred CccCCCCCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEcCCChhhhhhcCccCCCC
Q 014951 1 MRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLY 80 (415)
Q Consensus 1 L~~~Gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~ 80 (415)
|.++|+++|++|++++++++++++++|||+++|++++||+|.++.+++.+++++++++++|++.+....+... ..
T Consensus 1616 L~~~Gv~~~~~V~l~~~~s~~~vv~~lavlkaG~~~vpldp~~p~~rl~~il~~~~~~~~l~~~~~~~~~~~~-----~~ 1690 (3956)
T PRK12467 1616 LIALGVGPEVLVGIAVERSLEMVVGLLAILKAGGAYVPLDPEYPRERLAYMIEDSGIELLLTQSHLQARLPLP-----DG 1690 (3956)
T ss_pred HHHcCCCCCCEEEEEccCCHHHHHHHHHhhccCceeeecCCCCCHHHHHHHHHhCCCCEEEeChhhhhhCccc-----cC
Confidence 4578999999999999999999999999999999999999999999999999999999999987654433210 01
Q ss_pred ccEEEEecCCCchhhHHhhhcCceeecHHHHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEeecHHHHHHhhhhh
Q 014951 81 LKTIVSFANVSSSQKKEAEELGVSCFSWEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVD 160 (415)
Q Consensus 81 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~~~~ 160 (415)
..++.++... ++........+.....++++++++|||||||.||||+++|+++.+.+.+..
T Consensus 1691 -~~~~~~~~~~------------------~~~~~~~~~~~~~~~~~~~~ayiiyTSGSTG~PKGV~~th~~l~~~~~~~~ 1751 (3956)
T PRK12467 1691 -LRSLVLDQED------------------DWLEGYSDSNPAVNLAPQNLAYVIYTSGSTGRPKGAGNRHGALVNRLCATQ 1751 (3956)
T ss_pred -CcEEEecccc------------------chhccCCCCCCCCCCCCcCcEEEEECCCcCCCCCEEEEcCHHHHHHHHHHH
Confidence 1222222210 011111112223345679999999999999999999999999999988877
Q ss_pred hhhhhccccCCCCCEEEEeCChhhHHHHHHHHHhhhcCcEEEEeCC----CHHHHHHHHHhhCCeEEEeCcHHHHHHHHH
Q 014951 161 QMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG----DVRYLMEDIQELKPTMFSGVPRVYDRIYTG 236 (415)
Q Consensus 161 ~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~vv~~~~----~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~ 236 (415)
..+ .+...|+++++.|++|..++..++.++..|+++++.+. ++..+++.|+++++|++.++|++++.+.+.
T Consensus 1752 ~~~-----~~~~~d~~l~~~~~~fd~~~~~~~~~L~~G~~lvi~~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~ 1826 (3956)
T PRK12467 1752 EAY-----QLSAADVVLQFTSFAFDVSVWELFWPLINGARLVIAPPGAHRDPEQLIQLIERQQVTTLHFVPSMLQQLLQM 1826 (3956)
T ss_pred Hhc-----CCCcccEEEEecCccHHHHHHHHHHHHhCCCEEEEcChhhcCCHHHHHHHHHHcCCeEEECCHHHHHHHHhh
Confidence 666 77889999999999999998888999999999999864 789999999999999999999999987642
Q ss_pred HHHhhhcCChhhHHHHHHHHHhhhhccccCCCCCCccchhhHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHHHhc-C
Q 014951 237 ISNKISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTS-G 315 (415)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~~G~~~~~~~~~~~~~~~-~ 315 (415)
... . ...+++|.+++|||++++++.+.|.+.+ +
T Consensus 1827 ~~~--------------------------------------~--------~~~~~lr~v~~gGe~l~~~~~~~~~~~~~~ 1860 (3956)
T PRK12467 1827 DEQ--------------------------------------V--------EHPLSLRRVVCGGEALEVEALRPWLERLPD 1860 (3956)
T ss_pred ccc--------------------------------------c--------ccCCCceEEEEccccCCHHHHHHHHHhCCC
Confidence 000 0 0013799999999999999999887766 4
Q ss_pred CceEEeeccCCCCceeeeecCC----cccccCcccccccCeEEEEeecCCCCCCCCCCCCCCeEEEecCCccccccCCch
Q 014951 316 APLTQGYGLTESCSGCFTSLAD----VFNMIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPD 391 (415)
Q Consensus 316 ~~~~~~yG~tE~~~~~~~~~~~----~~~~~~~~G~~~~g~~~~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gY~~~~~ 391 (415)
..++|.||+||++..++..... ......++|+|+++++++|+| +++.. ++.|+.|||+|+|+++++||+++|+
T Consensus 1861 ~~l~n~YG~TE~t~~~t~~~~~~~~~~~~~~~~iG~p~~~~~~~vld-~~~~~--vp~G~~GEl~i~G~~v~~GYl~~p~ 1937 (3956)
T PRK12467 1861 TGLFNLYGPTETAVDVTHWTCRRKDLEGRDSVPIGQPIANLSTYILD-ASLNP--VPIGVAGELYLGGVGLARGYLNRPA 1937 (3956)
T ss_pred CeEEeCccCCcCEEeEEEEeccccccccCCCCCcccccCCCEEEEEC-CCCCC--CCCCCceEEEeccccccccccCChh
Confidence 6899999999998776644322 112246899999999999999 66654 4566999999999999999999999
Q ss_pred hhhhhhc--------CCceecCceEEEcCCCC
Q 014951 392 LTEEVIV--------DGWFHTGDIGEWQPMEL 415 (415)
Q Consensus 392 ~~~~~~~--------~g~~~TGDlg~~d~~G~ 415 (415)
+|.++|. ++||+|||+|++++||+
T Consensus 1938 ~t~~~f~~~p~~~~~~r~yrTGDl~~~~~dG~ 1969 (3956)
T PRK12467 1938 LTAERFVADPFGTVGSRLYRTGDLARYRADGV 1969 (3956)
T ss_pred hhhhhCcCCCCCCCCccceeccceEEECCCCC
Confidence 9999882 35999999999999985
No 91
>PRK06710 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=6.8e-45 Score=358.65 Aligned_cols=363 Identities=26% Similarity=0.455 Sum_probs=265.5
Q ss_pred CccCCCCCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEcCCChhhhhhcCccCCCC
Q 014951 1 MRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLY 80 (415)
Q Consensus 1 L~~~Gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~ 80 (415)
|.+.|+++||+|+++++|++++++++|||+++|++++|++|..+.+++..+++.++++++++++.....+...... ..
T Consensus 66 L~~~gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~vpi~p~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~--~~ 143 (563)
T PRK06710 66 LQKLGVEKGDRVAIMLPNCPQAVIGYYGTLLAGGIVVQTNPLYTERELEYQLHDSGAKVILCLDLVFPRVTNVQSA--TK 143 (563)
T ss_pred HHHcCCCCCCEEEEECCCChHHHHHHHHHHHcCeEEeccCcccCHHHHHHHHhccCCeEEEEeccchhhhhccchh--hc
Confidence 3467999999999999999999999999999999999999999999999999999999999998765544322211 11
Q ss_pred ccEEEEecCCC-ch--hh-------H----H-hhh-cCceeecHHHHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCCce
Q 014951 81 LKTIVSFANVS-SS--QK-------K----E-AEE-LGVSCFSWEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKG 144 (415)
Q Consensus 81 ~~~v~~~~~~~-~~--~~-------~----~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~ 144 (415)
...++...... .. .. . . ... .......++.+...............+++++++|||||||.||+
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~ 223 (563)
T PRK06710 144 IEHVIVTRIADFLPFPKNLLYPFVQKKQSNLVVKVSESETIHLWNSVEKEVNTGVEVPCDPENDLALLQYTGGTTGFPKG 223 (563)
T ss_pred cceeEEeccccccccccccccchhhcccccccccccccchhhhhhhhhhccccccccccCCCCCEEEEEcCCCCCCCCce
Confidence 12222211000 00 00 0 0 000 00000112221111111111112335789999999999999999
Q ss_pred EEeecHHHHHHhhhhhhhhhhccccCCCCCEEEEeCChhhHHHHHH-HHHhhhcCcEEEEeCC-CHHHHHHHHHhhCCeE
Q 014951 145 VVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQII-ETHCIHKGCSIGFWRG-DVRYLMEDIQELKPTM 222 (415)
Q Consensus 145 v~~th~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~-~~~~l~~G~~vv~~~~-~~~~~~~~i~~~~~t~ 222 (415)
|.++|.++..+.......+ .......+++++++|++|.+++.. ++.+++.|+++++.+. ++..+++.|+++++|+
T Consensus 224 v~~s~~~l~~~~~~~~~~~---~~~~~~~~~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~ 300 (563)
T PRK06710 224 VMLTHKNLVSNTLMGVQWL---YNCKEGEEVVLGVLPFFHVYGMTAVMNLSIMQGYKMVLIPKFDMKMVFEAIKKHKVTL 300 (563)
T ss_pred EEEehHHHHHHHHHHHhhc---cCCCCCCceEEEeCchHHHHHHHHHHHHHHHcCCeEEEcCCCCHHHHHHHHHHcCCeE
Confidence 9999999876543322211 001234568899999999998865 5568889999998766 9999999999999999
Q ss_pred EEeCcHHHHHHHHHHHHhhhcCChhhHHHHHHHHHhhhhccccCCCCCCccchhhHHHHHHHHHHhCCceeEEEEecCCC
Q 014951 223 FSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPL 302 (415)
Q Consensus 223 ~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~~G~~~ 302 (415)
+.++|+++..+++.. .....++ +++|.+++||+++
T Consensus 301 ~~~~P~~~~~l~~~~-------------------------------------~~~~~~~--------~~lr~v~~gg~~~ 335 (563)
T PRK06710 301 FPGAPTIYIALLNSP-------------------------------------LLKEYDI--------SSIRACISGSAPL 335 (563)
T ss_pred EeccHHHHHHHHcCC-------------------------------------ccccCCh--------hhhhheeeCCCcC
Confidence 999999998875410 0011111 2789999999999
Q ss_pred CHHHHHHHHHhcCCceEEeeccCCCCceeeeecCCcccccCcccccccCeEEEEeecCCCCCCCCCCCCCCeEEEecCCc
Q 014951 303 PIHVEEFLRVTSGAPLTQGYGLTESCSGCFTSLADVFNMIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTL 382 (415)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~G~~~~g~~~~i~~~~~~~~~~~~~~~~Gel~v~~~~~ 382 (415)
++++.+++++.++.++++.||+||++..............+++|+|++++.+++++ ++++ .+++.|+.|||+++|+.+
T Consensus 336 ~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~~-~~~~-~~~~~g~~Gel~v~g~~~ 413 (563)
T PRK06710 336 PVEVQEKFETVTGGKLVEGYGLTESSPVTHSNFLWEKRVPGSIGVPWPDTEAMIMS-LETG-EALPPGEIGEIVVKGPQI 413 (563)
T ss_pred CHHHHHHHHHhhCCCEecccccccCccccccCcccccccCCccCCCCCCCeEEEEE-CCCC-ccCCCCCceEEEEecCcc
Confidence 99999999998999999999999998765433322223347899999999999998 4333 455667999999999999
Q ss_pred cccccCCchhhhhhhcCCceecCceEEEcCCCC
Q 014951 383 FSGYYKRPDLTEEVIVDGWFHTGDIGEWQPMEL 415 (415)
Q Consensus 383 ~~gY~~~~~~~~~~~~~g~~~TGDlg~~d~~G~ 415 (415)
+.||+++++.+...|.+|||+|||+|++|+||+
T Consensus 414 ~~gY~~~~~~~~~~~~~g~~~TGD~~~~~~~g~ 446 (563)
T PRK06710 414 MKGYWNKPEETAAVLQDGWLHTGDVGYMDEDGF 446 (563)
T ss_pred chhhhCChHHHhhhcccCcccccceEEEcCCCc
Confidence 999999999999888999999999999999984
No 92
>PRK12406 long-chain-fatty-acid--CoA ligase; Provisional
Probab=100.00 E-value=1.9e-44 Score=351.43 Aligned_cols=357 Identities=20% Similarity=0.231 Sum_probs=271.1
Q ss_pred CccCCCCCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEcCCChhhhhhcCccCCCC
Q 014951 1 MRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLY 80 (415)
Q Consensus 1 L~~~Gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~ 80 (415)
|.+.|+++||+|+++++|+++++++++||+++|++++++++..+.+++.++++.++++++|++......+.......
T Consensus 28 l~~~g~~~g~~V~v~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~--- 104 (509)
T PRK12406 28 LAALGVRPGDCVALLMRNDFAFFEAAYAAMRLGAYAVPVNWHFKPEEIAYILEDSGARVLIAHADLLHGLASALPAG--- 104 (509)
T ss_pred HHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCeEEEecCcccCHHHHHHHHhccCCcEEEEccchhhhhhhhhhcc---
Confidence 35689999999999999999999999999999999999999999999999999999999999887665543322111
Q ss_pred ccEEEEecCCCchhh-----HHhhhcCceeecHHHHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEeecHHHHHH
Q 014951 81 LKTIVSFANVSSSQK-----KEAEELGVSCFSWEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAE 155 (415)
Q Consensus 81 ~~~v~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~ 155 (415)
..++.......... ............++++..... .......+++++++|||||||.||+|.++|......
T Consensus 105 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~~~~~ 180 (509)
T PRK12406 105 -VTVLSVPTPPEIAAAYRISPALLTPPAGAIDWEGWLAQQE---PYDGPPVPQPQSMIYTSGTTGHPKGVRRAAPTPEQA 180 (509)
T ss_pred -cceeecccccccccccccccccccCCCCccCHHHHhcccC---ccCCCCCCCceEEEECCCCCCCCceEEEechhHHHH
Confidence 11111111100000 000001112345555543221 122345789999999999999999999977654332
Q ss_pred ---hhhhhhhhhhccccCCCCCEEEEeCChhhHHHHHHHHHhhhcCcEEEEeCC-CHHHHHHHHHhhCCeEEEeCcHHHH
Q 014951 156 ---VLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG-DVRYLMEDIQELKPTMFSGVPRVYD 231 (415)
Q Consensus 156 ---~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~vv~~~~-~~~~~~~~i~~~~~t~~~~~P~~~~ 231 (415)
.......+ .+..++++++..|++|..+....+.++..|+++++.+. ++..+++.++++++|.+.++|+++.
T Consensus 181 ~~~~~~~~~~~-----~~~~~~~~l~~~p~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~~t~~~~~P~~~~ 255 (509)
T PRK12406 181 AAAEQMRALIY-----GLKPGIRALLTGPLYHSAPNAYGLRAGRLGGVLVLQPRFDPEELLQLIERHRITHMHMVPTMFI 255 (509)
T ss_pred HHHHHhhhhhc-----CCCCCceEEEEeCCcccchHHHHHHHHhhheEEEEccCCCHHHHHHHHHHcCCeEEEccHHHHH
Confidence 22223333 56789999999999999887776677888999988776 9999999999999999999999998
Q ss_pred HHHHHHHHhhhcCChhhHHHHHHHHHhhhhccccCCCCCCccchhhHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHH
Q 014951 232 RIYTGISNKISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLR 311 (415)
Q Consensus 232 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~~G~~~~~~~~~~~~ 311 (415)
.++...... ....+ .+++|.+++||+++++++.+++.
T Consensus 256 ~l~~~~~~~-----------------------------------~~~~~--------~~~l~~v~~gg~~~~~~~~~~~~ 292 (509)
T PRK12406 256 RLLKLPEEV-----------------------------------RAKYD--------VSSLRHVIHAAAPCPADVKRAMI 292 (509)
T ss_pred HHHhCchhh-----------------------------------cccCC--------CCceeEEEEcCCCCCHHHHHHHH
Confidence 875411000 00000 14899999999999999999999
Q ss_pred HhcCCceEEeeccCCCCceeeeecCCcccccCcccccccCeEEEEeecCCCCCCCCCCCCCCeEEEecCCccc-cccCCc
Q 014951 312 VTSGAPLTQGYGLTESCSGCFTSLADVFNMIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFS-GYYKRP 390 (415)
Q Consensus 312 ~~~~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~G~~~~g~~~~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~-gY~~~~ 390 (415)
+.++..+++.||+||++.+++....+....++++|.|+++++++++| +++. +++.|+.|||+++|+.++. +|++++
T Consensus 293 ~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d-~~~~--~~~~g~~Gel~v~~~~~~~~~y~~~~ 369 (509)
T PRK12406 293 EWWGPVIYEYYGSTESGAVTFATSEDALSHPGTVGKAAPGAELRFVD-EDGR--PLPQGEIGEIYSRIAGNPDFTYHNKP 369 (509)
T ss_pred HHcCCcEEeeccccccCceEecCcccccccCCCcCccCCCcEEEEEC-CCCC--CCCCCCceEEEEECCccccccccCCc
Confidence 98999999999999999876654433334458899999999999999 6664 4456799999999998875 999999
Q ss_pred hhhhhhhcCCceecCceEEEcCCCC
Q 014951 391 DLTEEVIVDGWFHTGDIGEWQPMEL 415 (415)
Q Consensus 391 ~~~~~~~~~g~~~TGDlg~~d~~G~ 415 (415)
+.+.+.+.+|||+|||+|++|+||+
T Consensus 370 ~~~~~~~~~~~~~TGD~~~~~~~g~ 394 (509)
T PRK12406 370 EKRAEIDRGGFITSGDVGYLDADGY 394 (509)
T ss_pred hhcccccCCCCeEEccEEEEcCCce
Confidence 9888888899999999999999984
No 93
>PRK07867 acyl-CoA synthetase; Validated
Probab=100.00 E-value=2.1e-44 Score=351.66 Aligned_cols=331 Identities=18% Similarity=0.242 Sum_probs=257.1
Q ss_pred CCCCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEcCCChhhhhhcCccCCCCccEE
Q 014951 5 GVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTI 84 (415)
Q Consensus 5 Gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~v 84 (415)
|+++|++|+++++|+++++++++||+++|++++|+++.++.+++.+++++++++++|++++....+.... ... .+
T Consensus 50 ~~~~~~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~----~~~-~~ 124 (529)
T PRK07867 50 DPTRPPHVGVLLDNTPEFSLLLGAAALSGIVPVGLNPTRRGAALARDIAHADCQLVLTESAHAELLDGLD----PGV-RV 124 (529)
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHhcCCEEEEecCCCChHHHHHHHHhCCCeEEEECHhHHHHHHhhc----cCc-eE
Confidence 7899999999999999999999999999999999999999999999999999999999987765443321 111 22
Q ss_pred EEecCCCchhhHHhhhcCceeecHHHHHhcC-CCCCCCCCCCCCCeEEEEecCCCCCCCceEEeecHHHHHHhhhhhhhh
Q 014951 85 VSFANVSSSQKKEAEELGVSCFSWEEFLQLG-TLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMF 163 (415)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~~~~~~~ 163 (415)
+..+. ..+.+.+... ..........++++++++|||||||.||+|++||+++..........+
T Consensus 125 ~~~~~----------------~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~ 188 (529)
T PRK07867 125 INVDS----------------PAWADELAAHRDAEPPFRVADPDDLFMLIFTSGTSGDPKAVRCTHRKVASAGVMLAQRF 188 (529)
T ss_pred EEecc----------------ccHHHHhcccCCCCCCcccCCccceEEEEECCCCCCCCcEEEecHHHHHHHHHHHHHhh
Confidence 22211 1133333221 111222345679999999999999999999999999988887766655
Q ss_pred hhccccCCCCCEEEEeCChhhHHHHHH-HHHhhhcCcEEEEeCC-CHHHHHHHHHhhCCeEEEeCcHHHHHHHHHHHHhh
Q 014951 164 VVTGKVCSEEDTYFSFLPLAHIYDQII-ETHCIHKGCSIGFWRG-DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKI 241 (415)
Q Consensus 164 ~~~~~~~~~~d~~l~~~p~~~~~~~~~-~~~~l~~G~~vv~~~~-~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~ 241 (415)
.+...|++++.+|++|.+++.. ++.++..|+++++.+. ++..+++.++++++|++.++|+.+..++.....
T Consensus 189 -----~~~~~d~~l~~~pl~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~vt~~~~~p~~~~~ll~~~~~-- 261 (529)
T PRK07867 189 -----GLGPDDVCYVSMPLFHSNAVMAGWAVALAAGASIALRRKFSASGFLPDVRRYGATYANYVGKPLSYVLATPER-- 261 (529)
T ss_pred -----CCCcccEEEEecchhHHHHHHHHHHHHHhcCceEEecCCCCHHHHHHHHHHhCCeEEeccHHHHHHHHhCCCc--
Confidence 6778999999999999999875 5567889999988765 899999999999999999999998876541000
Q ss_pred hcCChhhHHHHHHHHHhhhhccccCCCCCCccchhhHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHHHhcCCceEEe
Q 014951 242 SSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQG 321 (415)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~~G~~~~~~~~~~~~~~~~~~~~~~ 321 (415)
... ..+++|. ++||+++++.. ..+.+.++.++++.
T Consensus 262 -------------------------------~~~------------~~~~lr~-~~gg~~~~~~~-~~~~~~~g~~l~~~ 296 (529)
T PRK07867 262 -------------------------------PDD------------ADNPLRI-VYGNEGAPGDI-ARFARRFGCVVVDG 296 (529)
T ss_pred -------------------------------ccc------------cccceEE-EecCCCChHHH-HHHHHHhCCcEEEe
Confidence 000 0036774 56888887765 55666789999999
Q ss_pred eccCCCCceeeeecCCcccccCcccccccCeEEEEeecCCCCCCCCCCCC------------CCeEEE-ecCCccccccC
Q 014951 322 YGLTESCSGCFTSLADVFNMIGTVGVPMTTVEARLESVPEMGYDALSSVP------------RGEICL-RGNTLFSGYYK 388 (415)
Q Consensus 322 yG~tE~~~~~~~~~~~~~~~~~~~G~~~~g~~~~i~~~~~~~~~~~~~~~------------~Gel~v-~~~~~~~gY~~ 388 (415)
||+||++..+..... ...+++|.|.++ +++++.+.+. +++.++ .|||++ +|++++.||++
T Consensus 297 YG~TE~~~~~~~~~~---~~~~~~g~~~~~--~~i~~~~~~~--~~~~g~~~~~~~~~~~~~~Gel~i~~g~~~~~gy~~ 369 (529)
T PRK07867 297 FGSTEGGVAITRTPD---TPPGALGPLPPG--VAIVDPDTGT--ECPPAEDADGRLLNADEAIGELVNTAGPGGFEGYYN 369 (529)
T ss_pred ecccccccccccCCC---CCCCCcCCCCCC--EEEEECCCCC--CCCCCccccccccccCCcceEEEEecCCcccccccC
Confidence 999998865443221 234789999999 6777723333 344455 899999 99999999999
Q ss_pred CchhhhhhhcCCceecCceEEEcCCCC
Q 014951 389 RPDLTEEVIVDGWFHTGDIGEWQPMEL 415 (415)
Q Consensus 389 ~~~~~~~~~~~g~~~TGDlg~~d~~G~ 415 (415)
+++.+.+.|.+|||+|||+|++|++|+
T Consensus 370 ~~~~~~~~~~~g~~~TGD~~~~~~~g~ 396 (529)
T PRK07867 370 DPEADAERMRGGVYWSGDLAYRDADGY 396 (529)
T ss_pred ChHhhhhhhcCCeEeeccEEEEeCCCc
Confidence 999999999999999999999999985
No 94
>PRK08276 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=1.4e-44 Score=351.89 Aligned_cols=353 Identities=19% Similarity=0.246 Sum_probs=272.8
Q ss_pred CccCCCCCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEcCCChhhhhhcCccCCCC
Q 014951 1 MRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLY 80 (415)
Q Consensus 1 L~~~Gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~ 80 (415)
|.+.|+++||+|+++++|+++++++++||+++|++++|+++.++.+++..++++++++++|+++.....+..........
T Consensus 28 L~~~g~~~~~~V~i~~~~~~~~~~~~la~~~~G~~~~~l~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~ 107 (502)
T PRK08276 28 LRALGLREGDVVAILLENNPEFFEVYWAARRSGLYYTPINWHLTAAEIAYIVDDSGAKVLIVSAALADTAAELAAELPAG 107 (502)
T ss_pred HHHhCCCCCCEEEEEeCCCHHHHHHHHHHHhcCcEEEecccccCHHHHHHHHhcCCCCEEEEccchhhHHHHHhhhcccc
Confidence 45689999999999999999999999999999999999999999999999999999999999987766554433222113
Q ss_pred ccEEEEecCCCchhhHHhhhcCceeecHHHHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEeecHHHHHHhh--h
Q 014951 81 LKTIVSFANVSSSQKKEAEELGVSCFSWEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVL--S 158 (415)
Q Consensus 81 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~--~ 158 (415)
.+.++...... .....+++..... ........++.++++|||||||.||+|+++|.++..... .
T Consensus 108 ~~~~~~~~~~~-----------~~~~~~~~~~~~~---~~~~~~~~~~~a~i~~TSGtTG~PK~v~~~~~~~~~~~~~~~ 173 (502)
T PRK08276 108 VPLLLVVAGPV-----------PGFRSYEEALAAQ---PDTPIADETAGADMLYSSGTTGRPKGIKRPLPGLDPDEAPGM 173 (502)
T ss_pred ccEEEEeCCCC-----------CccccHHHHHhcC---CCCCCCCCCcceEEEECCCCCCCCceEEEccCCcchhhhhHH
Confidence 34444432211 1123444444321 112234567789999999999999999999877654321 1
Q ss_pred hhhhhhhccccCCCCCEEEEeCChhhHHHHHHHHHhhhcCcEEEEeCC-CHHHHHHHHHhhCCeEEEeCcHHHHHHHHHH
Q 014951 159 VDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG-DVRYLMEDIQELKPTMFSGVPRVYDRIYTGI 237 (415)
Q Consensus 159 ~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~vv~~~~-~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~ 237 (415)
........ ......+++++..|++|..++...+.++..|+++++.+. ++..+++.++++++|++.++|+++..+++..
T Consensus 174 ~~~~~~~~-~~~~~~~~~l~~~p~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~ 252 (502)
T PRK08276 174 MLALLGFG-MYGGPDSVYLSPAPLYHTAPLRFGMSALALGGTVVVMEKFDAEEALALIERYRVTHSQLVPTMFVRMLKLP 252 (502)
T ss_pred hhhhhhhc-ccCCCCCEEEEcCcHHHHHHHHHHHHHHhccceEEEcCCCCHHHHHHHHHHhCCeEEEehHHHHHHHHhCc
Confidence 10110111 122477899999999999998887788999999988876 9999999999999999999999998876411
Q ss_pred HHhhhcCChhhHHHHHHHHHhhhhccccCCCCCCccchhhHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHHHhcCCc
Q 014951 238 SNKISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAP 317 (415)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~~G~~~~~~~~~~~~~~~~~~ 317 (415)
.. .....++ +++|.+++||+++++++.+++.+.++..
T Consensus 253 ~~-----------------------------------~~~~~~~--------~~lr~i~~~g~~~~~~~~~~~~~~~~~~ 289 (502)
T PRK08276 253 EE-----------------------------------VRARYDV--------SSLRVAIHAAAPCPVEVKRAMIDWWGPI 289 (502)
T ss_pred cc-----------------------------------cCCCCCc--------ccceEEEecCCCCCHHHHHHHHHHhCcH
Confidence 00 0001111 3899999999999999999999988999
Q ss_pred eEEeeccCCCCceeeeecCCcccccCcccccccCeEEEEeecCCCCCCCCCCCCCCeEEEecCCccccccCCchhhhhhh
Q 014951 318 LTQGYGLTESCSGCFTSLADVFNMIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVI 397 (415)
Q Consensus 318 ~~~~yG~tE~~~~~~~~~~~~~~~~~~~G~~~~g~~~~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gY~~~~~~~~~~~ 397 (415)
+++.||+||++.+++..........+++|+|+ ++.++|+| +++. +++.|+.|||+++|+.++.||+++++.+...+
T Consensus 290 ~~~~yG~tE~~~~~~~~~~~~~~~~~~~G~~~-~~~~~i~d-~~~~--~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~ 365 (502)
T PRK08276 290 IHEYYASSEGGGVTVITSEDWLAHPGSVGKAV-LGEVRILD-EDGN--ELPPGEIGTVYFEMDGYPFEYHNDPEKTAAAR 365 (502)
T ss_pred hhhhcccccccceeEecCccccccCCCcceec-ccEEEEEC-CCCC--CCcCCCceEEEEECCCccchhcCCHHHHHHHh
Confidence 99999999999876655443334458899999 88999998 6664 44566999999999999999999999999998
Q ss_pred -cCCceecCceEEEcCCCC
Q 014951 398 -VDGWFHTGDIGEWQPMEL 415 (415)
Q Consensus 398 -~~g~~~TGDlg~~d~~G~ 415 (415)
.+|||+|||+|++|+||+
T Consensus 366 ~~~~~~~TGD~~~~~~~g~ 384 (502)
T PRK08276 366 NPHGWVTVGDVGYLDEDGY 384 (502)
T ss_pred cCCCceeecceEEEcCCcC
Confidence 459999999999999985
No 95
>PRK12316 peptide synthase; Provisional
Probab=100.00 E-value=4.3e-45 Score=424.19 Aligned_cols=336 Identities=20% Similarity=0.241 Sum_probs=272.7
Q ss_pred CccCCCCCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEcCCChhhhhhcCccCCCC
Q 014951 1 MRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLY 80 (415)
Q Consensus 1 L~~~Gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~ 80 (415)
|+++|+++||+|+++++|++++++++|||+++|++++||+|.++.+++.++++.++++++|++......+.. ..
T Consensus 553 L~~~gv~~g~~V~l~~~~s~~~i~~~la~~~aG~~~vpld~~~p~~rl~~il~~~~~~~~l~~~~~~~~~~~------~~ 626 (5163)
T PRK12316 553 LIERGVGPDVLVGVAMERSIEMVVALLAILKAGGAYVPLDPEYPAERLAYMLEDSGVQLLLSQSHLGRKLPL------AA 626 (5163)
T ss_pred HHHcCCCCCCEEEEEeCCCHHHHHHHHHHHHcCCEEeccCccCcHHHHHHHHHhCCCCEEEEChhhhhhCCc------cc
Confidence 457899999999999999999999999999999999999999999999999999999999998765443211 00
Q ss_pred ccEEEEecCCCchhhHHhhhcCceeecHHHHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEeecHHHHHHhhhhh
Q 014951 81 LKTIVSFANVSSSQKKEAEELGVSCFSWEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVD 160 (415)
Q Consensus 81 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~~~~ 160 (415)
...++.++... ................++++++++|||||||.||||+++|+++.+.+.+..
T Consensus 627 ~~~~~~~~~~~------------------~~~~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~~h~~l~~~~~~~~ 688 (5163)
T PRK12316 627 GVQVLDLDRPA------------------AWLEGYSEENPGTELNPENLAYVIYTSGSTGKPKGAGNRHRALSNRLCWMQ 688 (5163)
T ss_pred CceEEEecCcc------------------hhhccCCCCCCCCCCCCCCeEEEEECCCcCCCCCEeeEcCHHHHHHHHHHH
Confidence 11223322110 001111112222345688999999999999999999999999999998877
Q ss_pred hhhhhccccCCCCCEEEEeCChhhHHHHHHHHHhhhcCcEEEEeCC----CHHHHHHHHHhhCCeEEEeCcHHHHHHHHH
Q 014951 161 QMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG----DVRYLMEDIQELKPTMFSGVPRVYDRIYTG 236 (415)
Q Consensus 161 ~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~vv~~~~----~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~ 236 (415)
..+ .+..+|++++.+|++|..++..++.+++.|+++++.+. ++..+++.|+++++|++.++|++++.+++.
T Consensus 689 ~~~-----~~~~~d~~l~~~p~~fd~~~~~~~~~L~~G~~l~i~~~~~~~~~~~~~~~i~~~~vt~~~~~Ps~~~~l~~~ 763 (5163)
T PRK12316 689 QAY-----GLGVGDTVLQKTPFSFDVSVWEFFWPLMSGARLVVAAPGDHRDPAKLVELINREGVDTLHFVPSMLQAFLQD 763 (5163)
T ss_pred Hhc-----CCCCCCEEEeeCCeehHHHHHHHHHHHhCCCEEEECCccccCCHHHHHHHHHHcCCeEEEeCHHHHHHHHhc
Confidence 766 77899999999999999999889999999999999852 899999999999999999999999987541
Q ss_pred HHHhhhcCChhhHHHHHHHHHhhhhccccCCCCCCccchhhHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHHHhc-C
Q 014951 237 ISNKISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTS-G 315 (415)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~~G~~~~~~~~~~~~~~~-~ 315 (415)
.. .. + .+++|.+++|||++++++.+.+.+.+ +
T Consensus 764 ~~-------------------------------------~~--~--------~~~l~~~~~gGe~l~~~~~~~~~~~~~~ 796 (5163)
T PRK12316 764 ED-------------------------------------VA--S--------CTSLRRIVCSGEALPADAQEQVFAKLPQ 796 (5163)
T ss_pred cc-------------------------------------cc--c--------CCCccEEEEeeccCCHHHHHHHHHhCCC
Confidence 00 00 0 13799999999999999999886655 6
Q ss_pred CceEEeeccCCCCceeeeecC-CcccccCcccccccCeEEEEeecCCCCCCCCCCCCCCeEEEecCCccccccCCchhhh
Q 014951 316 APLTQGYGLTESCSGCFTSLA-DVFNMIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTE 394 (415)
Q Consensus 316 ~~~~~~yG~tE~~~~~~~~~~-~~~~~~~~~G~~~~g~~~~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gY~~~~~~~~ 394 (415)
.+++|.||+||++..++.... .......++|+|++|++++|+| +++. +++.|+.|||+|+|++++.||+++|+.|.
T Consensus 797 ~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~i~d-~~~~--~~p~G~~GEl~i~G~~v~~GYl~~~~~t~ 873 (5163)
T PRK12316 797 AGLYNLYGPTEAAIDVTHWTCVEEGGDSVPIGRPIANLACYILD-ANLE--PVPVGVLGELYLAGRGLARGYHGRPGLTA 873 (5163)
T ss_pred CeEEeCcCcChheeeeeEEecccccCCCCCCccccCCCEEEEEC-CCCC--CCCCCCceEEEecccccChhhCCChhhhh
Confidence 899999999999865544332 2223347899999999999999 7665 45567999999999999999999999999
Q ss_pred hhhc-------CCceecCceEEEcCCCC
Q 014951 395 EVIV-------DGWFHTGDIGEWQPMEL 415 (415)
Q Consensus 395 ~~~~-------~g~~~TGDlg~~d~~G~ 415 (415)
++|. ++||+|||+|++|+||+
T Consensus 874 ~~f~~~~~~~~~~~y~TGDl~~~~~dG~ 901 (5163)
T PRK12316 874 ERFVPSPFVAGERMYRTGDLARYRADGV 901 (5163)
T ss_pred hhCCCCCCCCCCeeEecCccEEECCCCC
Confidence 9882 35999999999999985
No 96
>PRK06178 acyl-CoA synthetase; Validated
Probab=100.00 E-value=2.3e-44 Score=355.16 Aligned_cols=362 Identities=22% Similarity=0.331 Sum_probs=268.2
Q ss_pred CccCCCCCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEcCCChhhhhhcCccCCCC
Q 014951 1 MRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLY 80 (415)
Q Consensus 1 L~~~Gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~ 80 (415)
|.+.|+++||+|+++++|+++++++++||+++|++++|++|..+.+++.+++++++++++++++...+.+.+..... .
T Consensus 75 L~~~g~~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~p~~~~~~~~~~l~~~~~~~ii~~~~~~~~l~~~~~~~--~ 152 (567)
T PRK06178 75 LRQRGVGAGDRVAVFLPNCPQFHIVFFGILKLGAVHVPVSPLFREHELSYELNDAGAEVLLALDQLAPVVEQVRAET--S 152 (567)
T ss_pred HHHcCCCCCCEEEEECCCCcHHHHHHHHHHHhCeEEeecCCCCCHHHHHHHHHhcCCcEEEEccchHHHHHHhhccC--C
Confidence 35679999999999999999999999999999999999999999999999999999999999988776665443321 2
Q ss_pred ccEEEEecCCCchhhH--Hhhh--------cCceeecHHHHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEeecH
Q 014951 81 LKTIVSFANVSSSQKK--EAEE--------LGVSCFSWEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQ 150 (415)
Q Consensus 81 ~~~v~~~~~~~~~~~~--~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~th~ 150 (415)
.+.++........... .... ....+.++.+...............++++++++|||||||.||+|++||.
T Consensus 153 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~t~~ 232 (567)
T PRK06178 153 LRHVIVTSLADVLPAEPTLPLPDSLRAPRLAAAGAIDLLPALRACTAPVPLPPPALDALAALNYTGGTTGMPKGCEHTQR 232 (567)
T ss_pred cceEEEeccccccccccccccccccccccccccccccHHHHhhccccccccCCCCCCCeEEEEeCCCCCCCCceEEeccH
Confidence 3333332211100000 0000 00011112111111111112234567999999999999999999999999
Q ss_pred HHHHHhhhhhhhhhhccccCCCCCEEEEeCChhhHHHHHH-HHHhhhcCcEEEEeCC-CHHHHHHHHHhhCCeEEEeCcH
Q 014951 151 AIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQII-ETHCIHKGCSIGFWRG-DVRYLMEDIQELKPTMFSGVPR 228 (415)
Q Consensus 151 ~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~-~~~~l~~G~~vv~~~~-~~~~~~~~i~~~~~t~~~~~P~ 228 (415)
++........... ......|++++++|++|.+++.. ++.+++.|+++++.+. ++..++..++++++|.+.++|.
T Consensus 233 ~~~~~~~~~~~~~----~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~l~~~~~~~~~~~~i~~~~~t~~~~~~~ 308 (567)
T PRK06178 233 DMVYTAAAAYAVA----VVGGEDSVFLSFLPEFWIAGENFGLLFPLFSGATLVLLARWDAVAFMAAVERYRVTRTVMLVD 308 (567)
T ss_pred HHHHHHHHHHHHh----ccCCCCcEEEEecchHHHHHHHHHHHHHHHcCceEEEeCCCCHHHHHHHHHHhCCeEEeccHH
Confidence 9987655432221 25678999999999999999864 6778999999999876 9999999999999999999999
Q ss_pred HHHHHHHHHHHhhhcCChhhHHHHHHHHHhhhhccccCCCCCCccchhhHHHHHHHHHHhCCceeEEE--EecCCCCHHH
Q 014951 229 VYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAML--SGAAPLPIHV 306 (415)
Q Consensus 229 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~--~~G~~~~~~~ 306 (415)
.+..+.... .....++ ++++.+. +.++++++++
T Consensus 309 ~~~~l~~~~-------------------------------------~~~~~~l--------~~l~~~~~~~~~~~~~~~~ 343 (567)
T PRK06178 309 NAVELMDHP-------------------------------------RFAEYDL--------SSLRQVRVVSFVKKLNPDY 343 (567)
T ss_pred HHHHHHhCC-------------------------------------CCCCCCc--------chheeeeeccccccCCHHH
Confidence 887765310 0001111 1455543 4568999999
Q ss_pred HHHHHHhcCCceEE-eeccCCCCceeeeecC---Cc---ccccCcccccccCeEEEEeecCCCCCCCCCCCCCCeEEEec
Q 014951 307 EEFLRVTSGAPLTQ-GYGLTESCSGCFTSLA---DV---FNMIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRG 379 (415)
Q Consensus 307 ~~~~~~~~~~~~~~-~yG~tE~~~~~~~~~~---~~---~~~~~~~G~~~~g~~~~i~~~~~~~~~~~~~~~~Gel~v~~ 379 (415)
.+.+++.++..++. .||+||++..+..... .. ...++++|+|+||++++|+|.+++ .+++.|+.|||+++|
T Consensus 344 ~~~~~~~~g~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~vG~p~~g~~v~v~d~~~~--~~~~~g~~Gel~v~g 421 (567)
T PRK06178 344 RQRWRALTGSVLAEAAWGMTETHTCDTFTAGFQDDDFDLLSQPVFVGLPVPGTEFKICDFETG--ELLPLGAEGEIVVRT 421 (567)
T ss_pred HHHHHHHhCCcccccccccccccccceeccccccCccccccCCcccccccCCcEEEEEcCCCC--CcCCCCCceEEEEEC
Confidence 99999988887665 7999998765443321 11 123467999999999999984334 345567999999999
Q ss_pred CCccccccCCchhhhhhhcCCceecCceEEEcCCCC
Q 014951 380 NTLFSGYYKRPDLTEEVIVDGWFHTGDIGEWQPMEL 415 (415)
Q Consensus 380 ~~~~~gY~~~~~~~~~~~~~g~~~TGDlg~~d~~G~ 415 (415)
++++.||+++++.+...|.+|||+|||+|++|+||+
T Consensus 422 ~~v~~gY~~~~~~~~~~~~dg~~~TGDl~~~~~~g~ 457 (567)
T PRK06178 422 PSLLKGYWNKPEATAEALRDGWLHTGDIGKIDEQGF 457 (567)
T ss_pred CcccccccCChhhhhhcccCCceeecceEEEecCCe
Confidence 999999999999999888899999999999999884
No 97
>PRK13390 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=2.6e-44 Score=349.72 Aligned_cols=344 Identities=19% Similarity=0.234 Sum_probs=258.1
Q ss_pred CccCCCCCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEcCCChhhhhhcCccCCCC
Q 014951 1 MRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLY 80 (415)
Q Consensus 1 L~~~Gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~ 80 (415)
|.++|+++||+|+++++|++++++++|||+++|++++|+++.++++++.++++++++++++++............ .
T Consensus 41 L~~~gv~~gd~V~i~~~n~~~~~~~~la~~~~Ga~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~----~ 116 (501)
T PRK13390 41 LYDAGLRTGDVVALLSDNSPEALVVLWAALRSGLYITAINHHLTAPEADYIVGDSGARVLVASAALDGLAAKVGA----D 116 (501)
T ss_pred HHHcCCCCCCEEEEEeCCCHHHHHHHHHHHHhCCEEeccccCCCHHHHHHHHHhcCCcEEEEcchhhhHHHHhhh----c
Confidence 456899999999999999999999999999999999999999999999999999999999998754332221111 1
Q ss_pred ccEEEEecCCCchhhHHhhhcCceeecHHHHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEe--ecHHHHHHhh-
Q 014951 81 LKTIVSFANVSSSQKKEAEELGVSCFSWEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVL--TNQAIVAEVL- 157 (415)
Q Consensus 81 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~--th~~l~~~~~- 157 (415)
....+.+.... .....+++...... ......+++++|+|||||||.||+|++ +|.++.....
T Consensus 117 ~~~~~~~~~~~-----------~~~~~~~~~~~~~~----~~~~~~~~~a~i~~TSGTTG~PKgV~~~~~~~~~~~~~~~ 181 (501)
T PRK13390 117 LPLRLSFGGEI-----------DGFGSFEAALAGAG----PRLTEQPCGAVMLYSSGTTGFPKGIQPDLPGRDVDAPGDP 181 (501)
T ss_pred cceEEEecCcc-----------cccccHHHHhcccC----CCCCCCcccEEEEeCCCCCCCCCEEEeeccccccccchhh
Confidence 11122221110 01122333322111 011123357999999999999999996 4555443221
Q ss_pred --h-hhhhhhhccccCCCCCEEEEeCChhhHHHHHHHHHhhhcCcEEEEeCC-CHHHHHHHHHhhCCeEEEeCcHHHHHH
Q 014951 158 --S-VDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG-DVRYLMEDIQELKPTMFSGVPRVYDRI 233 (415)
Q Consensus 158 --~-~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~vv~~~~-~~~~~~~~i~~~~~t~~~~~P~~~~~l 233 (415)
. ....+ .+..+|+++..+|++|.+++......+..|+++++.+. ++..+++.|+++++|++.++|+++..+
T Consensus 182 ~~~~~~~~~-----~~~~~~~~~~~~p~~h~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l 256 (501)
T PRK13390 182 IVAIARAFY-----DISESDIYYSSAPIYHAAPLRWCSMVHALGGTVVLAKRFDAQATLGHVERYRITVTQMVPTMFVRL 256 (501)
T ss_pred hHhhHHHHh-----CCCCCCeEEecccchhhhHHHHHHHHHhcCceEEEcCCcCHHHHHHHHHHcCCeEEEecHHHHHHH
Confidence 1 11122 56789999999999999988665556678999988776 899999999999999999999999887
Q ss_pred HHHHHHhhhcCChhhHHHHHHHHHhhhhccccCCCCCCccchhhHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHHHh
Q 014951 234 YTGISNKISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVT 313 (415)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~~G~~~~~~~~~~~~~~ 313 (415)
++..... ....++ +++|.+++||+++++++.+.+++.
T Consensus 257 ~~~~~~~-----------------------------------~~~~~~--------~~l~~v~~~g~~~~~~~~~~~~~~ 293 (501)
T PRK13390 257 LKLDADV-----------------------------------RTRYDV--------SSLRAVIHAAAPCPVDVKHAMIDW 293 (501)
T ss_pred Hhccchh-----------------------------------cccCCh--------hhhheEEEcCCCCCHHHHHHHHHh
Confidence 6411000 000011 378999999999999999999988
Q ss_pred cCCceEEeeccCCCCceeeeecCCcccccCcccccccCeEEEEeecCCCCCCCCCCCCCCeEEEecCCccccccCCchhh
Q 014951 314 SGAPLTQGYGLTESCSGCFTSLADVFNMIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLT 393 (415)
Q Consensus 314 ~~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~G~~~~g~~~~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gY~~~~~~~ 393 (415)
++.++++.||+||++.++...........+++|+|+++ .++|+| +++. +++.|+.|||+++|++++.||+++++.+
T Consensus 294 ~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~G~~~~g-~~~i~d-~~~~--~~~~g~~Gel~v~~~~~~~gy~~~~~~t 369 (501)
T PRK13390 294 LGPIVYEYYSSTEAHGMTFIDSPDWLAHPGSVGRSVLG-DLHICD-DDGN--ELPAGRIGTVYFERDRLPFRYLNDPEKT 369 (501)
T ss_pred cCCceeeeecccccCceEEecchhhccCCCCcCCcccc-eEEEEC-CCCC--CCCCCCceEEEEecCCccccccCChhhh
Confidence 89999999999999876554332222335789999999 699998 6664 4567799999999999999999999999
Q ss_pred hhhhc---CCceecCceEEEcCCCC
Q 014951 394 EEVIV---DGWFHTGDIGEWQPMEL 415 (415)
Q Consensus 394 ~~~~~---~g~~~TGDlg~~d~~G~ 415 (415)
.+.|. ++|++|||+|++|+||+
T Consensus 370 ~~~~~~~~~~w~~tGDl~~~~~dg~ 394 (501)
T PRK13390 370 AAAQHPAHPFWTTVGDLGSVDEDGY 394 (501)
T ss_pred HHhhccCCCceEEcCceEEECCCCe
Confidence 88873 68999999999999985
No 98
>PRK07445 O-succinylbenzoic acid--CoA ligase; Reviewed
Probab=100.00 E-value=8.3e-45 Score=346.81 Aligned_cols=301 Identities=17% Similarity=0.154 Sum_probs=237.3
Q ss_pred CccCCC-CCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEcCCChhhhhhcCccCCC
Q 014951 1 MRSRGV-NPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCL 79 (415)
Q Consensus 1 L~~~Gv-~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~ 79 (415)
|++.|+ ++|++|+++++|+++++++++||+++|++++|++|.++.+++.++++.+++++++++.+.....
T Consensus 36 L~~~g~~~~~~~V~i~~~n~~e~~~~~~A~~~~G~~~vpl~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--------- 106 (452)
T PRK07445 36 LQQLATPRTPPKILLAESDPLQFLAAFLAAVAAGCPVFLANPHWGQQEWQQVLNLVQPDQIWGLDQLKLSH--------- 106 (452)
T ss_pred HHHhcCCCCCCeEEEecCCCHHHHHHHHHHHHhCcEEEeeccCCCHHHHHHHHHhcCCCEEEecCcccccc---------
Confidence 356677 5799999999999999999999999999999999999999999999999999999876532110
Q ss_pred CccEEEEecCCCchhhHHhhhcCceeecHHHHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEeecHHHHHHhhhh
Q 014951 80 YLKTIVSFANVSSSQKKEAEELGVSCFSWEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSV 159 (415)
Q Consensus 80 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~~~ 159 (415)
.... ........++++++++|||||||.||+|++||+++...+...
T Consensus 107 -------~~~~---------------------------~~~~~~~~~~~~~~i~~TSGTTG~PKgV~~t~~~l~~~~~~~ 152 (452)
T PRK07445 107 -------PPPL---------------------------PSQGILPNLETGWIMIPTGGSSGQIRFAIHTWETLTASVQGF 152 (452)
T ss_pred -------CCCC---------------------------CccccCCCCCCcEEEEeCCCCCCCCcEEEechHHHHHHHHHH
Confidence 0000 000012346899999999999999999999999998887766
Q ss_pred hhhhhhccccCCCCCEEEEeCChhhHHHHHHHHHhhhcCcEEEEeCC-CHHHHHHHHHhhCCeEEEeCcHHHHHHHHHHH
Q 014951 160 DQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG-DVRYLMEDIQELKPTMFSGVPRVYDRIYTGIS 238 (415)
Q Consensus 160 ~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~vv~~~~-~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~ 238 (415)
...+ .+++ ++.++++|++|.+|+..++.+++.|+++++.+. ..........++++|++.++|++++.+++..
T Consensus 153 ~~~~-----~~~~-~~~~~~~Pl~h~~g~~~~~~~l~~G~t~v~~~~~~~~~~~~~~~~~~~t~~~~vP~~l~~l~~~~- 225 (452)
T PRK07445 153 QRYF-----QLQQ-VNSFCVLPLYHVSGLMQFMRSFLTGGKLVILPYKRLKSGQELPPNPSDFFLSLVPTQLQRLLQLR- 225 (452)
T ss_pred HHHh-----cCCC-CceEeccCchhhhhHHHHHHHHHcCCeEEEcChHhccchhhhhhhcCceEEEehHHHHHHHHhhC-
Confidence 5544 3433 467889999999999878889999999998864 2233334445788999999999999875410
Q ss_pred HhhhcCChhhHHHHHHHHHhhhhccccCCCCCCccchhhHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHHHhcCCce
Q 014951 239 NKISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPL 318 (415)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~~G~~~~~~~~~~~~~~~~~~~ 318 (415)
..++ +++|.+++||+++++++.+.+.+ ++.++
T Consensus 226 ---------------------------------------~~~l--------~~l~~i~~gG~~l~~~~~~~~~~-~~~~l 257 (452)
T PRK07445 226 ---------------------------------------PQWL--------AQFRTILLGGAPAWPSLLEQARQ-LQLRL 257 (452)
T ss_pred ---------------------------------------hhhh--------hcceEEEECCccCCHHHHHHHHh-cCCeE
Confidence 0001 38999999999999999988875 58999
Q ss_pred EEeeccCCCCceeeeecCCc-ccccCcccccccCeEEEEeecCCCCCCCCCCCCCCeEEEecCCccccccCCchhhhhhh
Q 014951 319 TQGYGLTESCSGCFTSLADV-FNMIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVI 397 (415)
Q Consensus 319 ~~~yG~tE~~~~~~~~~~~~-~~~~~~~G~~~~g~~~~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gY~~~~~~~~~~~ 397 (415)
++.||+||++..+....++. ....+++|+|+|+++++|++ ++.|||+++||.++.||++++..
T Consensus 258 ~~~YG~TE~~~~~~~~~~~~~~~~~~~~G~~~p~~~v~i~~-----------g~~Gel~v~g~~~~~gY~~~~~~----- 321 (452)
T PRK07445 258 APTYGMTETASQIATLKPDDFLAGNNSSGQVLPHAQITIPA-----------NQTGNITIQAQSLALGYYPQILD----- 321 (452)
T ss_pred ecCcchhhhcccccccCchhhccCCCcCCccCCCCeEEEcC-----------CCcceEEEeCCccchhhcCCccC-----
Confidence 99999999876544333222 22347899999999999972 36899999999999999986431
Q ss_pred cCCceecCceEEEcCCCC
Q 014951 398 VDGWFHTGDIGEWQPMEL 415 (415)
Q Consensus 398 ~~g~~~TGDlg~~d~~G~ 415 (415)
.+|||+|||+|++|+||+
T Consensus 322 ~~g~~~TGDl~~~d~dG~ 339 (452)
T PRK07445 322 SQGIFETDDLGYLDAQGY 339 (452)
T ss_pred CCCEEECCCEEEEcCCCC
Confidence 478999999999999986
No 99
>PRK08974 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=5.7e-44 Score=351.88 Aligned_cols=361 Identities=21% Similarity=0.336 Sum_probs=269.7
Q ss_pred cCCCCCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEcCCChhhhhhcCccCCCCcc
Q 014951 3 SRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLK 82 (415)
Q Consensus 3 ~~Gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~ 82 (415)
++|+++||+|+++++|++++++++|||+++|++++|++|.++.+++.++++.+++++++++.+..+.+...... ...+
T Consensus 68 ~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~--~~~~ 145 (560)
T PRK08974 68 GLGLKKGDRVALMMPNLLQYPIALFGILRAGMIVVNVNPLYTPRELEHQLNDSGAKAIVIVSNFAHTLEKVVFK--TPVK 145 (560)
T ss_pred hcCCCCCCEEEEECCCCHHHHHHHHHHHHcCcEEeccCccCCHHHHHHHHHhcCceEEEEeccccHHHHHHhhh--cCcc
Confidence 37999999999999999999999999999999999999999999999999999999999987655544332211 1122
Q ss_pred EEEEecCCCc--hhhHH-------------hhhcCceeecHHHHHhcCC-CCCCCCCCCCCCeEEEEecCCCCCCCceEE
Q 014951 83 TIVSFANVSS--SQKKE-------------AEELGVSCFSWEEFLQLGT-LDCELPPKKKTNISTIMYTSGTTGEPKGVV 146 (415)
Q Consensus 83 ~v~~~~~~~~--~~~~~-------------~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~ 146 (415)
.++....... ..... ..........+.+....+. .........++++++++|||||||.||+|.
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~ 225 (560)
T PRK08974 146 HVILTRMGDQLSTAKGTLVNFVVKYIKRLVPKYHLPDAISFRSALHKGRRMQYVKPELVPEDLAFLQYTGGTTGVAKGAM 225 (560)
T ss_pred eEEEecccccccccccccccchhhhcccccccccCCCcccHHHHhhccCCCCCCCCCCCCCCeEEEEECCCCCCCCcEEE
Confidence 2222111000 00000 0000001112223222221 111123346789999999999999999999
Q ss_pred eecHHHHHHhhhhhhhhhhccccCCCCCEEEEeCChhhHHHHHH-HHHhhhcCcEEEEeCC--CHHHHHHHHHhhCCeEE
Q 014951 147 LTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQII-ETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTMF 223 (415)
Q Consensus 147 ~th~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~-~~~~l~~G~~vv~~~~--~~~~~~~~i~~~~~t~~ 223 (415)
++|.++..++......+. .......+.++..+|++|.+++.. .+.+++.|+++++... ++..+++.++++++|.+
T Consensus 226 ~t~~~l~~~~~~~~~~~~--~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~ 303 (560)
T PRK08974 226 LTHRNMLANLEQAKAAYG--PLLHPGKELVVTALPLYHIFALTVNCLLFIELGGQNLLITNPRDIPGFVKELKKYPFTAI 303 (560)
T ss_pred EchHHHHHHHHHHHHhhc--cccCCCccEEEEeCcHHHHHHHHHHHHHHhhcCCeEEEecCccCHHHHHHHHHhcCcceE
Confidence 999999887654332221 012345678889999999988764 5667888988777643 88899999999999999
Q ss_pred EeCcHHHHHHHHHHHHhhhcCChhhHHHHHHHHHhhhhccccCCCCCCccchhhHHHHHHHHHHhCCceeEEEEecCCCC
Q 014951 224 SGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLP 303 (415)
Q Consensus 224 ~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~~G~~~~ 303 (415)
.++|+++..+.+... ....++ +++|.+++||++++
T Consensus 304 ~~~p~~~~~l~~~~~-------------------------------------~~~~~~--------~~lr~~~~gg~~~~ 338 (560)
T PRK08974 304 TGVNTLFNALLNNEE-------------------------------------FQELDF--------SSLKLSVGGGMAVQ 338 (560)
T ss_pred cCcHHHHHHHHhCcC-------------------------------------cccCCc--------cceeEEEecCccCC
Confidence 999999998764110 000011 37999999999999
Q ss_pred HHHHHHHHHhcCCceEEeeccCCCCceeeeecCCcccccCcccccccCeEEEEeecCCCCCCCCCCCCCCeEEEecCCcc
Q 014951 304 IHVEEFLRVTSGAPLTQGYGLTESCSGCFTSLADVFNMIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLF 383 (415)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~G~~~~g~~~~i~~~~~~~~~~~~~~~~Gel~v~~~~~~ 383 (415)
+.+.+++++.++.++++.||+||++..+.....+.....+++|.|+++++++|++ +++. +++.|+.|||+++|+.++
T Consensus 339 ~~~~~~~~~~~g~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~~-~~~~--~~~~g~~Gel~v~g~~~~ 415 (560)
T PRK08974 339 QAVAERWVKLTGQYLLEGYGLTECSPLVSVNPYDLDYYSGSIGLPVPSTEIKLVD-DDGN--EVPPGEPGELWVKGPQVM 415 (560)
T ss_pred HHHHHHHHHHhCCcEEeeecccccCceeeccCCCCcccCCccccCcCCCEEEEEC-CCCC--CCCCCCceEEEEecCCcc
Confidence 9999999998899999999999998776655444334457899999999999999 6664 445669999999999999
Q ss_pred ccccCCchhhhhhhcCCceecCceEEEcCCCC
Q 014951 384 SGYYKRPDLTEEVIVDGWFHTGDIGEWQPMEL 415 (415)
Q Consensus 384 ~gY~~~~~~~~~~~~~g~~~TGDlg~~d~~G~ 415 (415)
.||+++++.+...|.+|||+|||+|++|++|+
T Consensus 416 ~gy~~~~~~~~~~~~~g~~~TGDl~~~~~~g~ 447 (560)
T PRK08974 416 LGYWQRPEATDEVIKDGWLATGDIAVMDEEGF 447 (560)
T ss_pred hhhcCChhhhhhhhhcCCcccCCEEEEcCCce
Confidence 99999999999888899999999999999874
No 100
>PRK05691 peptide synthase; Validated
Probab=100.00 E-value=9.2e-45 Score=418.71 Aligned_cols=338 Identities=17% Similarity=0.190 Sum_probs=273.9
Q ss_pred CccCCCCCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEcCCChhhhhhcCccCC-C
Q 014951 1 MRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCC-L 79 (415)
Q Consensus 1 L~~~Gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~-~ 79 (415)
|++.|+++|++|+|+++++++++++++|++++|++++||+|.++.+++.+++++++++++|++............... .
T Consensus 3762 L~~~gv~~~~~V~v~~~~s~~~~v~~lavlkaG~a~vpld~~~p~~r~~~il~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 3841 (4334)
T PRK05691 3762 LRAAGVGVDQPVALLAERGLDLLGMIVGSFKAGAGYLPLDPGLPAQRLQRIIELSRTPVLVCSAACREQARALLDELGCA 3841 (4334)
T ss_pred HHHcCCCCCCEEEEEeCCCHHHHHHHHHHHhhCcEEeCCCCCChHHHHHHHHHhcCCCEEEecCcccchhhhhhcccccc
Confidence 457899999999999999999999999999999999999999999999999999999999999876544332221110 0
Q ss_pred CccEEEEecCCCchhhHHhhhcCceeecHHHHHhcC-CCCCCCCCCCCCCeEEEEecCCCCCCCceEEeecHHHHHHhhh
Q 014951 80 YLKTIVSFANVSSSQKKEAEELGVSCFSWEEFLQLG-TLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLS 158 (415)
Q Consensus 80 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~~ 158 (415)
....++..+.. .... ....+.....+++++|++|||||||.||||+++|+++.+.+.+
T Consensus 3842 ~~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~~ayvi~TSGSTG~PKGV~~~h~~~~~~~~~ 3900 (4334)
T PRK05691 3842 NRPRLLVWEEV---------------------QAGEVASHNPGIYSGPDNLAYVIYTSGSTGLPKGVMVEQRGMLNNQLS 3900 (4334)
T ss_pred cccceeeeccc---------------------ccccccccCCCCCCCCCceEEEEECCCCCCCCCEEEeehHHHHHHHHH
Confidence 11112211111 0000 1111223456899999999999999999999999999999988
Q ss_pred hhhhhhhccccCCCCCEEEEeCChhhHHHHHHHHHhhhcCcEEEEeCC----CHHHHHHHHHhhCCeEEEeCcHHHHHHH
Q 014951 159 VDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG----DVRYLMEDIQELKPTMFSGVPRVYDRIY 234 (415)
Q Consensus 159 ~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~vv~~~~----~~~~~~~~i~~~~~t~~~~~P~~~~~l~ 234 (415)
....+ .+++.|+++...+++|..+...++.++..|+++++.+. ++..+++.++++++|++.++|+++..++
T Consensus 3901 ~~~~~-----~~~~~~~~~~~~s~~fd~s~~~~~~~l~~G~~l~i~~~~~~~~~~~l~~~~~~~~vt~~~~~Ps~~~~l~ 3975 (4334)
T PRK05691 3901 KVPYL-----ALSEADVIAQTASQSFDISVWQFLAAPLFGARVEIVPNAIAHDPQGLLAHVQAQGITVLESVPSLIQGML 3975 (4334)
T ss_pred HHHhc-----CCCccceEEEecCCchhHHHHHHHHHHhCCCEEEEcCccccCCHHHHHHHHHHcCCeEEEeCHHHHHHHH
Confidence 77776 78999999999999999999999999999999998864 7899999999999999999999998875
Q ss_pred HHHHHhhhcCChhhHHHHHHHHHhhhhccccCCCCCCccchhhHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHHHhc
Q 014951 235 TGISNKISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTS 314 (415)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~~G~~~~~~~~~~~~~~~ 314 (415)
+.... ...+||.+++|||++++++.+.|.+.+
T Consensus 3976 ~~~~~------------------------------------------------~~~~lr~~~~gGe~l~~~~~~~~~~~~ 4007 (4334)
T PRK05691 3976 AEDRQ------------------------------------------------ALDGLRWMLPTGEAMPPELARQWLQRY 4007 (4334)
T ss_pred hhccc------------------------------------------------cCCCceEEEecCCcCCHHHHHHHHHhC
Confidence 41100 003799999999999999988887654
Q ss_pred -CCceEEeeccCCCCceeeeecCCccc---ccCcccccccCeEEEEeecCCCCCCCCCCCCCCeEEEecCCccccccCCc
Q 014951 315 -GAPLTQGYGLTESCSGCFTSLADVFN---MIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRP 390 (415)
Q Consensus 315 -~~~~~~~yG~tE~~~~~~~~~~~~~~---~~~~~G~~~~g~~~~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gY~~~~ 390 (415)
+++++|.||+||++..++....+... ...++|+|+++++++|+| +++..+| .|..|||+|+|+++++||+++|
T Consensus 4008 ~~~~l~n~YG~TE~t~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~v~d-~~~~~~p--~g~~GEL~i~G~~v~~GY~~~~ 4084 (4334)
T PRK05691 4008 PQIGLVNAYGPAECSDDVAFFRVDLASTRGSYLPIGSPTDNNRLYLLD-EALELVP--LGAVGELCVAGTGVGRGYVGDP 4084 (4334)
T ss_pred CCCeEEeCccCccceeEEEEEEcccccccCCcCCCCCccCCCEEEEEC-CCCCCCC--CCCceEEEEecccccccccCCc
Confidence 78999999999999877654332221 225799999999999999 6665554 5599999999999999999999
Q ss_pred hhhhhhhc--------CCceecCceEEEcCCCC
Q 014951 391 DLTEEVIV--------DGWFHTGDIGEWQPMEL 415 (415)
Q Consensus 391 ~~~~~~~~--------~g~~~TGDlg~~d~~G~ 415 (415)
++|.++|. ++||||||+|++++||+
T Consensus 4085 ~~t~~~f~~~p~~~~~~~~yrTGDl~~~~~dG~ 4117 (4334)
T PRK05691 4085 LRTALAFVPHPFGAPGERLYRTGDLARRRSDGV 4117 (4334)
T ss_pred ccchhhcccCCCCCCCceeeccCcceeecCCCc
Confidence 99999982 46999999999999985
No 101
>PRK05851 long-chain-fatty-acid--[acyl-carrier-protein] ligase; Validated
Probab=100.00 E-value=6e-45 Score=355.55 Aligned_cols=326 Identities=18% Similarity=0.257 Sum_probs=239.1
Q ss_pred CCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCC-------CCCHHHHHHHHHhcCceEEEEcCCChhhhhhcCccCCC
Q 014951 7 NPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYD-------TLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCL 79 (415)
Q Consensus 7 ~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~-------~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~ 79 (415)
++||+|+|+++|+++++++++||+++|+++++++. ....+++.++++.++++++|++.+....+......
T Consensus 52 ~~g~~V~l~~~~~~e~~~~~la~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~--- 128 (525)
T PRK05851 52 DRPGAVGLVGEPTVELVAAIQGAWLAGAAVSILPGPVRGADDGRWADATLTRFAGIGVRTVLSHGSHLERLRAVDSS--- 128 (525)
T ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHcCCCCcCCCCCCCccchhhHHHHHHHHHHhcCCCEEEeCHHHHHHHHHhhcc---
Confidence 79999999999999999999999999998654321 12234566778999999999987665444321110
Q ss_pred CccEEEEecCCCchhhHHhhhcCceeecHHHHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEeecHHHHHHhhhh
Q 014951 80 YLKTIVSFANVSSSQKKEAEELGVSCFSWEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSV 159 (415)
Q Consensus 80 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~~~ 159 (415)
+.+.+ +....... .........++++++|+|||||||.||||++||.++...+...
T Consensus 129 -----~~~~~------------------~~~~~~~~-~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~th~~~~~~~~~~ 184 (525)
T PRK05851 129 -----VTVHD------------------LATAAHTN-RSASLTPPDSGGPAVLQGTAGSTGTPRTAILSPGAVLSNLRGL 184 (525)
T ss_pred -----ccccc------------------cccccccc-ccccCCCCCCCCeEEEEeCCCCCCCCcEEEecHHHHHHHHHHH
Confidence 00000 00000000 0011123467899999999999999999999999999988876
Q ss_pred hhhhhhccccCC-CCCEEEEeCChhhHHHHHHHHHhhhcCcEEEEeCC-----CHHHHHHHHHhhCCeEEEeCcHHHHHH
Q 014951 160 DQMFVVTGKVCS-EEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG-----DVRYLMEDIQELKPTMFSGVPRVYDRI 233 (415)
Q Consensus 160 ~~~~~~~~~~~~-~~d~~l~~~p~~~~~~~~~~~~~l~~G~~vv~~~~-----~~~~~~~~i~~~~~t~~~~~P~~~~~l 233 (415)
...+ .+. .+|++++++|++|.+++..++.+++.|+++++.+. ++..+++.++++++|++.. |.++..+
T Consensus 185 ~~~~-----~~~~~~d~~l~~~pl~h~~g~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~-p~~~~~~ 258 (525)
T PRK05851 185 NARV-----GLDAATDVGCSWLPLYHDMGLAFLLTAALAGAPLWLAPTTAFSASPFRWLSWLSDSRATLTAA-PNFAYNL 258 (525)
T ss_pred HHHh-----CCCCCCCeEEEcCCCccCccHHHHHHHHHcCCeEEEcCHHHHHHCHHHHHHHHHHhCCeEEeC-CcHHHHH
Confidence 6655 666 89999999999999999888889999999999762 6788999999999998754 5544333
Q ss_pred HHHHHHhhhcCChhhHHHHHHHHHhhhhccccCCCCCCccchhhHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHHHh
Q 014951 234 YTGISNKISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVT 313 (415)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~~G~~~~~~~~~~~~~~ 313 (415)
+...... ....++ +++|.+++||+++++++.++|.+.
T Consensus 259 l~~~~~~-----------------------------------~~~~~l--------~~lr~~~~gG~~l~~~~~~~~~~~ 295 (525)
T PRK05851 259 IGKYARR-----------------------------------VSDVDL--------GALRVALNGGEPVDCDGFERFATA 295 (525)
T ss_pred HHHhhcc-----------------------------------ccCCCH--------HHhheeEeccccCCHHHHHHHHHH
Confidence 2211000 000111 378999999999999999888764
Q ss_pred ---cCC---ceEEeeccCCCCceeeeecCCc--------------ccccCcccccccCeEEEEeecCCCCCCCCCCCCCC
Q 014951 314 ---SGA---PLTQGYGLTESCSGCFTSLADV--------------FNMIGTVGVPMTTVEARLESVPEMGYDALSSVPRG 373 (415)
Q Consensus 314 ---~~~---~~~~~yG~tE~~~~~~~~~~~~--------------~~~~~~~G~~~~g~~~~i~~~~~~~~~~~~~~~~G 373 (415)
++. .+++.||+||++..+....+.. ....+++|+|++|++++|+| +++. .+++.|+.|
T Consensus 296 ~~~~g~~~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~p~~g~~v~i~d-~~~~-~~~~~g~~G 373 (525)
T PRK05851 296 MAPFGFDAGAAAPSYGLAESTCAVTVPVPGIGLRVDEVTTDDGSGARRHAVLGNPIPGMEVRISP-GDGA-AGVAGREIG 373 (525)
T ss_pred HhhcCCChhhcccccchhhhceEEEecCCCCCceeeeeccccCcccceeeeecCCCCCcEEEEEC-CCCC-ccCCCCCeE
Confidence 344 4999999999987665432210 12236899999999999998 5553 345667999
Q ss_pred eEEEecCCccccccCCchhhhhhhcCCceecCceEEEcCCCC
Q 014951 374 EICLRGNTLFSGYYKRPDLTEEVIVDGWFHTGDIGEWQPMEL 415 (415)
Q Consensus 374 el~v~~~~~~~gY~~~~~~~~~~~~~g~~~TGDlg~~d~~G~ 415 (415)
||+++|++++.|||++++.+ .+|||+|||+|++| +|+
T Consensus 374 El~v~g~~~~~GY~~~~~~~----~~~~~~TGDl~~~~-~G~ 410 (525)
T PRK05851 374 EIEIRGASMMSGYLGQAPID----PDDWFPTGDLGYLV-DGG 410 (525)
T ss_pred EEEEecCchhhccccCCccC----CCCceeccceEEEE-CCE
Confidence 99999999999999998653 37899999999997 563
No 102
>PRK13391 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=7.4e-44 Score=347.32 Aligned_cols=349 Identities=20% Similarity=0.240 Sum_probs=267.1
Q ss_pred CccCCCCCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEcCCChhhhhhcCccCCCC
Q 014951 1 MRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLY 80 (415)
Q Consensus 1 L~~~Gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~ 80 (415)
|.++|+++||+|+++++|+++++++++||+++|++++++++.++.+++.++++.++++.++++......+....... ..
T Consensus 41 L~~~g~~~~~~V~v~~~~~~~~~~~~~a~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~-~~ 119 (511)
T PRK13391 41 FRSLGLKRGDHVAIFMENNLRYLEVCWAAERSGLYYTCVNSHLTPAEAAYIVDDSGARALITSAAKLDVARALLKQC-PG 119 (511)
T ss_pred HHHcCCCCCCEEEEECCCCHHHHHHHHHHHHhccEEeccccccCHHHHHHHHhccCCcEEEEchhhHHHHHHHHhcC-CC
Confidence 45679999999999999999999999999999999999999999999999999999999999987765544333221 22
Q ss_pred ccEEEEecCCCchhhHHhhhcCceeecHHHHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEee--cHHHHHHh--
Q 014951 81 LKTIVSFANVSSSQKKEAEELGVSCFSWEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLT--NQAIVAEV-- 156 (415)
Q Consensus 81 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t--h~~l~~~~-- 156 (415)
....+.+..... ......+++...... .......++.++++|||||||.||+|.++ |.++....
T Consensus 120 ~~~~~~~~~~~~---------~~~~~~~~~~~~~~~---~~~~~~~~~~a~il~TSGtTG~PKgv~~~~~~~~~~~~~~~ 187 (511)
T PRK13391 120 VRHRLVLDGDGE---------LEGFVGYAEAVAGLP---ATPIADESLGTDMLYSSGTTGRPKGIKRPLPEQPPDTPLPL 187 (511)
T ss_pred ceEEEEecCCCC---------CcccccHHHHhcCCC---CCCCCCcccccEEEECCCCCCCCCEEEEccccchhhhhhHH
Confidence 333344332110 011233444332211 11122345678999999999999999964 65554332
Q ss_pred -hhhhhhhhhccccCCCCCEEEEeCChhhHHHHHHHHHhhhcCcEEEEeCC-CHHHHHHHHHhhCCeEEEeCcHHHHHHH
Q 014951 157 -LSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG-DVRYLMEDIQELKPTMFSGVPRVYDRIY 234 (415)
Q Consensus 157 -~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~vv~~~~-~~~~~~~~i~~~~~t~~~~~P~~~~~l~ 234 (415)
......+ .+...+++++.+|++|.+++...+.++..|+++++.+. ++..+++.++++++|++.++|+++..+.
T Consensus 188 ~~~~~~~~-----~~~~~~~~l~~~p~~h~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~ 262 (511)
T PRK13391 188 TAFLQRLW-----GFRSDMVYLSPAPLYHSAPQRAVMLVIRLGGTVIVMEHFDAEQYLALIEEYGVTHTQLVPTMFSRML 262 (511)
T ss_pred HHHHHHhc-----CCCCCCeEEEcCCHHHHHHHHHHHHHHHcCceEEECCCCCHHHHHHHHHHhCCeEEEehHHHHHHHH
Confidence 2222222 56788999999999999998877888999999999876 9999999999999999999999998875
Q ss_pred HHHHHhhhcCChhhHHHHHHHHHhhhhccccCCCCCCccchhhHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHHHhc
Q 014951 235 TGISNKISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTS 314 (415)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~~G~~~~~~~~~~~~~~~ 314 (415)
+..... ....+ .+++|.+++||+++++++.+++++.+
T Consensus 263 ~~~~~~-----------------------------------~~~~~--------~~~l~~~~~gg~~~~~~~~~~~~~~~ 299 (511)
T PRK13391 263 KLPEEV-----------------------------------RDKYD--------LSSLEVAIHAAAPCPPQVKEQMIDWW 299 (511)
T ss_pred hCchhh-----------------------------------cccCC--------ccceeEEEEccCCCCHHHHHHHHHHc
Confidence 411100 00000 13899999999999999999999988
Q ss_pred CCceEEeeccCCCCceeeeecCCcccccCcccccccCeEEEEeecCCCCCCCCCCCCCCeEEEecCCccccccCCchhhh
Q 014951 315 GAPLTQGYGLTESCSGCFTSLADVFNMIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTE 394 (415)
Q Consensus 315 ~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~G~~~~g~~~~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gY~~~~~~~~ 394 (415)
+..+++.||+||++.++...........+++|+|+++ .++|+| +++. +++.|+.|||+++|+ ++.||+++++.+.
T Consensus 300 g~~v~~~YG~tE~~~~~~~~~~~~~~~~~~vG~~~~g-~~~i~d-~~~~--~~~~g~~Gel~~~g~-~~~gy~~~~~~~~ 374 (511)
T PRK13391 300 GPIIHEYYAATEGLGFTACDSEEWLAHPGTVGRAMFG-DLHILD-DDGA--ELPPGEPGTIWFEGG-RPFEYLNDPAKTA 374 (511)
T ss_pred CCceeeeeccccccceEEecCccccccCCCcCCcccc-eEEEEC-CCCC--CCCCCCceEEEEecC-cceEEcCChhHhH
Confidence 9999999999999877654433333345899999999 688888 6664 345679999999999 8899999999998
Q ss_pred hhh-c-CCceecCceEEEcCCCC
Q 014951 395 EVI-V-DGWFHTGDIGEWQPMEL 415 (415)
Q Consensus 395 ~~~-~-~g~~~TGDlg~~d~~G~ 415 (415)
+.+ . ++||+|||+|++|+||+
T Consensus 375 ~~~~~~~~w~~TGD~g~~~~~g~ 397 (511)
T PRK13391 375 EARHPDGTWSTVGDIGYVDEDGY 397 (511)
T ss_pred HhhccCCCEEecCCEEEECCCcc
Confidence 887 3 49999999999999984
No 103
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=100.00 E-value=2.9e-44 Score=380.83 Aligned_cols=343 Identities=20% Similarity=0.249 Sum_probs=264.0
Q ss_pred CCCCCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEcCCChhhhh--hcCccCCCCc
Q 014951 4 RGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSIL--SCLPRCCLYL 81 (415)
Q Consensus 4 ~Gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~--~~~~~~~~~~ 81 (415)
.|+++||+|+++++|+++++++++||+++|++++|+++..+.+++.+++++++++++|++++..+... ...... +..
T Consensus 677 ~g~~~gd~V~i~~~n~~~~~~~~la~~~~G~v~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~-~~~ 755 (1140)
T PRK06814 677 KNTPPGENVGVMLPNANGAAVTFFALQSAGRVPAMINFSAGIANILSACKAAQVKTVLTSRAFIEKARLGPLIEAL-EFG 755 (1140)
T ss_pred hcCCCCCeEEEEcCCchHHHHHHHHHHHCCCEEEEcCCCCCHHHHHHHHHHcCCCEEEecHHHHhhhcchhHHHHh-ccC
Confidence 58999999999999999999999999999999999999999999999999999999999876443211 100111 122
Q ss_pred cEEEEecCCCchhhHHhhhcCceeecHHHHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEeecHHHHHHhhhhhh
Q 014951 82 KTIVSFANVSSSQKKEAEELGVSCFSWEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQ 161 (415)
Q Consensus 82 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~~~~~ 161 (415)
..++.+++..... .....+.+...........+...++|+++++|||||||.||+|++||+++..+......
T Consensus 756 ~~~i~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~ 827 (1140)
T PRK06814 756 IRIIYLEDVRAQI--------GLADKIKGLLAGRFPLVYFCNRDPDDPAVILFTSGSEGTPKGVVLSHRNLLANRAQVAA 827 (1140)
T ss_pred ceEEEehHhhccC--------ChHHHHHHHhhccCCccccCCCCCCCcEEEEECCCccCCCcEEEecHHHHHHHHHHHHH
Confidence 3444443221000 00001111111111111112457899999999999999999999999999988877666
Q ss_pred hhhhccccCCCCCEEEEeCChhhHHHHH-HHHHhhhcCcEEEEeCC--CHHHHHHHHHhhCCeEEEeCcHHHHHHHHHHH
Q 014951 162 MFVVTGKVCSEEDTYFSFLPLAHIYDQI-IETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTMFSGVPRVYDRIYTGIS 238 (415)
Q Consensus 162 ~~~~~~~~~~~~d~~l~~~p~~~~~~~~-~~~~~l~~G~~vv~~~~--~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~ 238 (415)
.+ ...++|++++.+|++|.+++. ..+.++..|+++++.+. +...+.+.++++++|++.++|++++.+.+...
T Consensus 828 ~~-----~~~~~d~~l~~~pl~h~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~l~~l~~~~~ 902 (1140)
T PRK06814 828 RI-----DFSPEDKVFNALPVFHSFGLTGGLVLPLLSGVKVFLYPSPLHYRIIPELIYDTNATILFGTDTFLNGYARYAH 902 (1140)
T ss_pred hh-----CCCCcCEEEEecchHHHHHHHHHHHHHHHcCCEEEEecCcccHHHHHHHHHhcCCEEEEecHHHHHHHHhhcc
Confidence 55 678899999999999999985 47788999999998764 66788899999999999999999987654100
Q ss_pred HhhhcCChhhHHHHHHHHHhhhhccccCCCCCCccchhhHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHHHhcCCce
Q 014951 239 NKISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPL 318 (415)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~~G~~~~~~~~~~~~~~~~~~~ 318 (415)
..++ +++|.+++||+++++++.+.+.+.++.++
T Consensus 903 ---------------------------------------~~~~--------~~lr~v~~gg~~l~~~~~~~~~~~~~~~~ 935 (1140)
T PRK06814 903 ---------------------------------------PYDF--------RSLRYVFAGAEKVKEETRQTWMEKFGIRI 935 (1140)
T ss_pred ---------------------------------------cccc--------cceeEEEEcCCcCCHHHHHHHHHHhCCcE
Confidence 0001 38999999999999999999999899999
Q ss_pred EEeeccCCCCceeeeecCCcccccCcccccccCeEEEEeecCCCCCCCCCCCCCCeEEEecCCccccccCCchhhhh-hh
Q 014951 319 TQGYGLTESCSGCFTSLADVFNMIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEE-VI 397 (415)
Q Consensus 319 ~~~yG~tE~~~~~~~~~~~~~~~~~~~G~~~~g~~~~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gY~~~~~~~~~-~~ 397 (415)
++.||+||++..+....+.. .+.+++|+|.||+++++.+ .++ .++.|||+++|++++.||+++++.... ..
T Consensus 936 ~~~YG~TE~~~~~~~~~~~~-~~~~~vG~p~~g~~~~~~~-~~~------~~~~Gel~v~g~~~~~gY~~~~~~~~~~~~ 1007 (1140)
T PRK06814 936 LEGYGVTETAPVIALNTPMH-NKAGTVGRLLPGIEYRLEP-VPG------IDEGGRLFVRGPNVMLGYLRAENPGVLEPP 1007 (1140)
T ss_pred EeccccccccceEEecCCCC-CCCCcCCccCCCCeEEEee-cCC------CCCceEEEEeCCCcchhhcCCCCCCccccC
Confidence 99999999988766544332 3348999999999999987 332 247899999999999999987654322 23
Q ss_pred cCCceecCceEEEcCCCC
Q 014951 398 VDGWFHTGDIGEWQPMEL 415 (415)
Q Consensus 398 ~~g~~~TGDlg~~d~~G~ 415 (415)
.+|||+|||+|++|+||+
T Consensus 1008 ~~g~~~TGDl~~~d~dG~ 1025 (1140)
T PRK06814 1008 ADGWYDTGDIVTIDEEGF 1025 (1140)
T ss_pred CCCeEecCCEEEECCCCe
Confidence 689999999999999995
No 104
>TIGR01923 menE O-succinylbenzoate-CoA ligase. This model represents an enzyme, O-succinylbenzoate-CoA ligase, which is involved in the fourth step of the menaquinone biosynthesis pathway. O-succinylbenzoate-CoA ligase, together with menB - naphtoate synthase, take 2-succinylbenzoate and convert it into 1,4-di-hydroxy-2- naphtoate.
Probab=100.00 E-value=5e-44 Score=341.97 Aligned_cols=319 Identities=25% Similarity=0.383 Sum_probs=257.8
Q ss_pred CccCCCCCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEcCCChhhhhhcCccCCCC
Q 014951 1 MRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLY 80 (415)
Q Consensus 1 L~~~Gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~ 80 (415)
|++.|+++||+|+++++|+++++++++||+++|++++++++.++.+++..++++++++++++++........
T Consensus 16 l~~~g~~~gd~v~i~~~~~~~~~~~~la~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-------- 87 (436)
T TIGR01923 16 LKAQGIRSGSRVALVGQNSIEMVLLLHACLLLGAEIAMLNTRLTENERTNQLEDLDVQLLLTDSLLEEKDFQ-------- 87 (436)
T ss_pred HHHhCCCCCCEEEEEcCCCHHHHHHHHHHHhcCcEEEecCcCCCHHHHHHHHHhcCCCEEEEcCccccccee--------
Confidence 457899999999999999999999999999999999999999999999999999999999998763211000
Q ss_pred ccEEEEecCCCchhhHHhhhcCceeecHHHHHhcC-CCCCCCCCCCCCCeEEEEecCCCCCCCceEEeecHHHHHHhhhh
Q 014951 81 LKTIVSFANVSSSQKKEAEELGVSCFSWEEFLQLG-TLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSV 159 (415)
Q Consensus 81 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~~~ 159 (415)
...+.++.... ...........+++++++|||||||.||+|+++|.++...+...
T Consensus 88 ------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~PK~v~~s~~~~~~~~~~~ 143 (436)
T TIGR01923 88 ------------------------ADSLDRIEAAGRYETSLSASFNMDQIATLMFTSGTTGKPKAVPHTFRNHYASAVGS 143 (436)
T ss_pred ------------------------ecchHhhhhcccccccccccCCcCceEEEEeCCCCCCCCcEEEEehHHHHHHHHHH
Confidence 00111111111 01111233456889999999999999999999999999988877
Q ss_pred hhhhhhccccCCCCCEEEEeCChhhHHHHHHHHHhhhcCcEEEEeCCCHHHHHHHHHhhCCeEEEeCcHHHHHHHHHHHH
Q 014951 160 DQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRGDVRYLMEDIQELKPTMFSGVPRVYDRIYTGISN 239 (415)
Q Consensus 160 ~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~vv~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~ 239 (415)
...+ .++++|++++.+|++|..++..++.++..|+++++.+.. ..+++.++++++|++.++|+++..+.+...
T Consensus 144 ~~~~-----~~~~~d~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~-~~~~~~l~~~~~t~~~~~P~~l~~l~~~~~- 216 (436)
T TIGR01923 144 KENL-----GFTEDDNWLLSLPLYHISGLSILFRWLIEGATLRIVDKF-NQLLEMIANERVTHISLVPTQLNRLLDEGG- 216 (436)
T ss_pred Hhhc-----CCCCCceEEEccCcHhHHHHHHHHHHHhcCceEEecchH-HHHHHHHHHhCCeEEEeHHHHHHHHHhCcC-
Confidence 6665 778899999999999999988788899999999998653 499999999999999999999988754100
Q ss_pred hhhcCChhhHHHHHHHHHhhhhccccCCCCCCccchhhHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHHHhcCCceE
Q 014951 240 KISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLT 319 (415)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~~G~~~~~~~~~~~~~~~~~~~~ 319 (415)
.. .++|.++++|+++++++.+++.+ ++..++
T Consensus 217 ------------------------------------~~------------~~l~~~~~~G~~~~~~~~~~~~~-~~~~~~ 247 (436)
T TIGR01923 217 ------------------------------------HN------------ENLRKILLGGSAIPAPLIEEAQQ-YGLPIY 247 (436)
T ss_pred ------------------------------------CC------------CceEEEEECCCCCCHHHHHHHHH-hCCcee
Confidence 00 27999999999999999998875 599999
Q ss_pred EeeccCCCCceeeeecCCcccccCcccccccCeEEEEeecCCCCCCCCCCCCCCeEEEecCCccccccCCchhhhhhhcC
Q 014951 320 QGYGLTESCSGCFTSLADVFNMIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVIVD 399 (415)
Q Consensus 320 ~~yG~tE~~~~~~~~~~~~~~~~~~~G~~~~g~~~~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gY~~~~~~~~~~~~~ 399 (415)
+.||+||++..++....+......++|.|+++++++|.+ ++.. +.|||+++|+.++.||+++++.+...+.+
T Consensus 248 ~~YG~tE~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~~-~~~~-------~~Gel~v~~~~~~~gy~~~~~~~~~~~~~ 319 (436)
T TIGR01923 248 LSYGMTETCSQVTTATPEMLHARPDVGRPLAGREIKIKV-DNKE-------GHGEIMVKGANLMKGYLYQGELTPAFEQQ 319 (436)
T ss_pred eEecCCccchhccCcCccccccccCCCccCCCcEEEEEe-CCCC-------CceEEEEECCccchhhCCChhhhhhhhcC
Confidence 999999998765544333222223599999999999954 2221 68999999999999999988888777788
Q ss_pred CceecCceEEEcCCCC
Q 014951 400 GWFHTGDIGEWQPMEL 415 (415)
Q Consensus 400 g~~~TGDlg~~d~~G~ 415 (415)
|||+|||+|++|+||+
T Consensus 320 ~~~~TGD~~~~~~dg~ 335 (436)
T TIGR01923 320 GWFNTGDIGELDGEGF 335 (436)
T ss_pred CCeeccceEEEcCCCC
Confidence 9999999999999984
No 105
>TIGR01734 D-ala-DACP-lig D-alanine--poly(phosphoribitol) ligase, subunit 1. This model represents the enzyme (also called D-alanine-D-alanyl carrier protein ligase) which activates D-alanine as an adenylate via the reaction D-ala + ATP - D-ala-AMP + PPi, and further catalyzes the condensation of the amino acid adenylate with the D-alanyl carrier protein (D-ala-ACP). The D-alanine is then further transferred to teichoic acid in the biosynthesis of lipoteichoic acid (LTA) and wall teichoic acid (WTA) in gram positive bacteria, both polysacchatides.
Probab=100.00 E-value=4.2e-44 Score=348.62 Aligned_cols=333 Identities=19% Similarity=0.255 Sum_probs=262.8
Q ss_pred CccCCCCCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEcCCChhhhhhcCccCCCC
Q 014951 1 MRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLY 80 (415)
Q Consensus 1 L~~~Gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~ 80 (415)
|.+.|+++||+|+++++|+++++++++||+++|++++|+++.++.+++..+++..+++.+|++.+.......
T Consensus 42 L~~~g~~~~~~V~i~~~~~~~~~~~~la~~~~G~~~v~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~-------- 113 (502)
T TIGR01734 42 IQKRILPKKSPIIVYGHMEPHMLVAFLGSIKSGHAYIPVDTSIPSERIEMIIEAAGPELVIHTAELSIDAVG-------- 113 (502)
T ss_pred HHHhCCCCCCeEEEEeCCCHHHHHHHHHHHHhCCEEeCCCCcChHHHHHHHHHhcCCCEEEecccccccccC--------
Confidence 346799999999999999999999999999999999999999999999999999999999998765432211
Q ss_pred ccEEEEecCCCchhhHHhhhcCceeecHHHHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEeecHHHHHHhhhhh
Q 014951 81 LKTIVSFANVSSSQKKEAEELGVSCFSWEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVD 160 (415)
Q Consensus 81 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~~~~ 160 (415)
. .++.+.. ..................+++.++++|||||||.||+|+++|+++...+....
T Consensus 114 ~-~~~~~~~------------------~~~~~~~~~~~~~~~~~~~~~~~~il~TSGTTG~PK~v~~s~~~~~~~~~~~~ 174 (502)
T TIGR01734 114 T-QIITLSA------------------LEQAETSGGPVSFDHAVKGDDNYYIIYTSGSTGNPKGVQISHDNLVSFTNWML 174 (502)
T ss_pred C-ceEEchH------------------hhhhhhhcCCccccccCCCCCeEEEEECCCCCCCCCEEEEecHHHHHHHHHHH
Confidence 0 1111111 11111111111112234678999999999999999999999999998887765
Q ss_pred hhhhhccccCCCCCEEEEeCChhhHHHHHHHHHhhhcCcEEEEeCC----CHHHHHHHHHhhCCeEEEeCcHHHHHHHHH
Q 014951 161 QMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG----DVRYLMEDIQELKPTMFSGVPRVYDRIYTG 236 (415)
Q Consensus 161 ~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~vv~~~~----~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~ 236 (415)
..+ ....+++++++.|++|..++..++.++..|+++++.+. ++..+++.++++++|.+.++|.+++.++..
T Consensus 175 ~~~-----~~~~~~~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~p~~~~~~l~~ 249 (502)
T TIGR01734 175 ADF-----PLSEGKQFLNQAPFSFDLSVMDLYPCLASGGTLHCLDKDITNNFKLLFEELPKTGLNVWVSTPSFVDMCLLD 249 (502)
T ss_pred HhC-----CCCCCceEEeecCceechhHHHHHHHHHCCCEEEEcCHHHhcCHHHHHHHHHHcCCeEEEEChhHHHHHHhc
Confidence 554 67789999999999999998888889999999998764 788999999999999999999998776431
Q ss_pred HHHhhhcCChhhHHHHHHHHHhhhhccccCCCCCCccchhhHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHHHhc-C
Q 014951 237 ISNKISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTS-G 315 (415)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~~G~~~~~~~~~~~~~~~-~ 315 (415)
.. ... ...++++.++++|+++++++.+++.+.+ +
T Consensus 250 ~~-------------------------------------~~~--------~~~~~l~~~~~~G~~~~~~~~~~~~~~~~~ 284 (502)
T TIGR01734 250 PN-------------------------------------FNQ--------ENYPHLTHFLFCGEELPVKTAKALLERFPK 284 (502)
T ss_pred cc-------------------------------------ccc--------ccCCcccEEEEcCCcCCHHHHHHHHHHCCC
Confidence 00 000 0014799999999999999999988877 7
Q ss_pred CceEEeeccCCCCceeeeecCCc----ccccCcccccccCeEEEEeecCCCCCCCCCCCCCCeEEEecCCccccccCCch
Q 014951 316 APLTQGYGLTESCSGCFTSLADV----FNMIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPD 391 (415)
Q Consensus 316 ~~~~~~yG~tE~~~~~~~~~~~~----~~~~~~~G~~~~g~~~~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gY~~~~~ 391 (415)
.++++.||+||++..+....... .....++|.+.++++++|++ +++. +++.|+.|||+++|+.++.||+++++
T Consensus 285 ~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~vg~~~~~~~~~i~~-~~~~--~~~~g~~Gel~v~g~~~~~gy~~~~~ 361 (502)
T TIGR01734 285 ATIYNTYGPTEATVAVTSVKITQEILDQYPRLPIGFAKPDMNLFIMD-EEGE--PLPEGEKGEIVIVGPSVSKGYLNNPE 361 (502)
T ss_pred cEEEeCccCCcceEEEEEEEccccccccCCccccccccCCCEEEEEC-CCCC--CCCCCCeeEEEEccccccccccCCcc
Confidence 89999999999876544322111 11235799999999999999 6664 44567999999999999999999999
Q ss_pred hhhhhhc----CCceecCceEEEcCC
Q 014951 392 LTEEVIV----DGWFHTGDIGEWQPM 413 (415)
Q Consensus 392 ~~~~~~~----~g~~~TGDlg~~d~~ 413 (415)
.+.+.|. ++||+|||+|++|++
T Consensus 362 ~~~~~~~~~~~~~~~~TGDlg~~~~~ 387 (502)
T TIGR01734 362 KTAEAFFSHEGQPAYRTGDAGTITDG 387 (502)
T ss_pred cchHhheeCCCcEEEECCCEEEEECC
Confidence 9988772 359999999999975
No 106
>PRK05691 peptide synthase; Validated
Probab=100.00 E-value=2.2e-44 Score=415.67 Aligned_cols=334 Identities=21% Similarity=0.316 Sum_probs=271.2
Q ss_pred CccCCCCCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEcCCChhhhhhcCccCCCC
Q 014951 1 MRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLY 80 (415)
Q Consensus 1 L~~~Gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~ 80 (415)
|++.|+++|++|+++++++++++++++|++++|++++|++|.++.+++.+++++++++++|++.+....+.... .
T Consensus 1173 L~~~gv~~g~~V~i~~~~s~~~iv~~lailkaG~~~vpld~~~p~~rl~~il~~~~~~~vi~~~~~~~~~~~~~-----~ 1247 (4334)
T PRK05691 1173 LRDKGVGPDVCVAIAAERSPQLLVGLLAILKAGGAYVPLDPDYPAERLAYMLADSGVELLLTQSHLLERLPQAE-----G 1247 (4334)
T ss_pred HHHcCCCCCCEEEEEeCCCHHHHHHHHHHHHhCCEEEecCcCChHHHHHHHHHhcCCCEEEecchhhhhccccc-----C
Confidence 46789999999999999999999999999999999999999999999999999999999999886554332110 0
Q ss_pred ccEEEEecCCCchhhHHhhhcCceeecHHHHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEeecHHHHHHhhhhh
Q 014951 81 LKTIVSFANVSSSQKKEAEELGVSCFSWEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVD 160 (415)
Q Consensus 81 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~~~~ 160 (415)
...+.++... ... .....+.....++++++++|||||||.||||+++|+++.+.+.+..
T Consensus 1248 -~~~~~~~~~~----------------~~~----~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~~h~~l~~~~~~~~ 1306 (4334)
T PRK05691 1248 -VSAIALDSLH----------------LDS----WPSQAPGLHLHGDNLAYVIYTSGSTGQPKGVGNTHAALAERLQWMQ 1306 (4334)
T ss_pred -ceEEeecccc----------------ccc----cCCCCCCCCCCCCCeEEEEEcCCCCCCCceeEeecHHHHHHHHHHH
Confidence 0111111110 000 0001112234678999999999999999999999999999988876
Q ss_pred hhhhhccccCCCCCEEEEeCChhhHHHHHHHHHhhhcCcEEEEeCC----CHHHHHHHHHhhCCeEEEeCcHHHHHHHHH
Q 014951 161 QMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG----DVRYLMEDIQELKPTMFSGVPRVYDRIYTG 236 (415)
Q Consensus 161 ~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~vv~~~~----~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~ 236 (415)
..+ .+.++|++++..|++|..++..++.++..|+++++.+. ++..+++.|+++++|++.++|++++.+.+.
T Consensus 1307 ~~~-----~~~~~d~~l~~~~~~fd~s~~~~~~~L~~G~~l~i~~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~l~~l~~~ 1381 (4334)
T PRK05691 1307 ATY-----ALDDSDVLMQKAPISFDVSVWECFWPLITGCRLVLAGPGEHRDPQRIAELVQQYGVTTLHFVPPLLQLFIDE 1381 (4334)
T ss_pred Hhc-----CCCCCCEEEEeCCccHHHHHHHHHHHHhCCCEEEEcCccccCCHHHHHHHHHHcCCeEEECcHHHHHHHHhC
Confidence 666 77899999999999999998888999999999999753 889999999999999999999999887541
Q ss_pred HHHhhhcCChhhHHHHHHHHHhhhhccccCCCCCCccchhhHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHHHhc-C
Q 014951 237 ISNKISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTS-G 315 (415)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~~G~~~~~~~~~~~~~~~-~ 315 (415)
.. . . ..++||.+++|||++++++.+++.+.+ +
T Consensus 1382 ~~---------------------------------------~---~-----~~~~lr~~~~gGe~l~~~~~~~~~~~~~~ 1414 (4334)
T PRK05691 1382 PL---------------------------------------A---A-----ACTSLRRLFSGGEALPAELRNRVLQRLPQ 1414 (4334)
T ss_pred cc---------------------------------------c---c-----cCCcccEEEEeecCCCHHHHHHHHHhCCC
Confidence 00 0 0 013899999999999999999988776 6
Q ss_pred CceEEeeccCCCCceeeeecC-CcccccCcccccccCeEEEEeecCCCCCCCCCCCCCCeEEEecCCccccccCCchhhh
Q 014951 316 APLTQGYGLTESCSGCFTSLA-DVFNMIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTE 394 (415)
Q Consensus 316 ~~~~~~yG~tE~~~~~~~~~~-~~~~~~~~~G~~~~g~~~~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gY~~~~~~~~ 394 (415)
.+++|.||+||++..++.... .......++|+|+++++++|+| +++.. ++.|+.|||+|+|+++++||+++|+.|.
T Consensus 1415 ~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~i~d-~~~~~--vp~G~~GEL~i~G~~v~~GYl~~p~~t~ 1491 (4334)
T PRK05691 1415 VQLHNRYGPTETAINVTHWQCQAEDGERSPIGRPLGNVLCRVLD-AELNL--LPPGVAGELCIGGAGLARGYLGRPALTA 1491 (4334)
T ss_pred cEEEeCCCcChheeeeeeeecccccCCCCcccceeCCCEEEEEC-CCCCC--CCCCCceEEEecCcccchhhcCCccccH
Confidence 799999999999876654332 2222347899999999999999 77654 4566999999999999999999999999
Q ss_pred hhhc--------CCceecCceEEEcCCCC
Q 014951 395 EVIV--------DGWFHTGDIGEWQPMEL 415 (415)
Q Consensus 395 ~~~~--------~g~~~TGDlg~~d~~G~ 415 (415)
++|. .+||+|||+|++++||+
T Consensus 1492 ~~f~~~p~~~~~~r~yrTGDl~~~~~dG~ 1520 (4334)
T PRK05691 1492 ERFVPDPLGEDGARLYRTGDRARWNADGA 1520 (4334)
T ss_pred hhCCCCCCCCCCceEEEccceEEECCCCC
Confidence 9882 24999999999999995
No 107
>PRK08162 acyl-CoA synthetase; Validated
Probab=100.00 E-value=7.9e-43 Score=342.85 Aligned_cols=359 Identities=23% Similarity=0.300 Sum_probs=256.5
Q ss_pred CccCCCCCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEcCCChhhhhhcCccCCCC
Q 014951 1 MRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLY 80 (415)
Q Consensus 1 L~~~Gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~ 80 (415)
|.+.|+++||+|+++++|++++++++|||+++|++++|+++.++.+++..+++.++++.+|++.+..+.+....... +.
T Consensus 60 L~~~g~~~g~~v~i~~~~~~~~~~~~lA~~~~G~~~vpl~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~-~~ 138 (545)
T PRK08162 60 LARRGIGRGDTVAVLLPNIPAMVEAHFGVPMAGAVLNTLNTRLDAASIAFMLRHGEAKVLIVDTEFAEVAREALALL-PG 138 (545)
T ss_pred HHHhCCCCCCEEEEECCCchHHHHHHHHHHHhCcEEeccccccChHHHHHHHHhCCCeEEEEccchhhHHHHHHhhC-CC
Confidence 34679999999999999999999999999999999999999999999999999999999999988776654432211 11
Q ss_pred ccEEEEecCCCchhhHHhhhcCceeecHHHHHhcCCCCCCC-CCCCCCCeEEEEecCCCCCCCceEEeecHHHHHHhhhh
Q 014951 81 LKTIVSFANVSSSQKKEAEELGVSCFSWEEFLQLGTLDCEL-PPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSV 159 (415)
Q Consensus 81 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~~~ 159 (415)
. ..+.++...... .........+++++.......... .+.+.+++++++|||||||.||+|+++|+++.......
T Consensus 139 ~-~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PKgv~~t~~~~~~~~~~~ 214 (545)
T PRK08162 139 P-KPLVIDVDDPEY---PGGRFIGALDYEAFLASGDPDFAWTLPADEWDAIALNYTSGTTGNPKGVVYHHRGAYLNALSN 214 (545)
T ss_pred C-ceEEEecCcccc---ccCCCcccccHHHHhccCCccccccCCCCCCCeEEEEeCCCCCCCCcEEEEecHHHHHHHHHH
Confidence 1 122222111000 000111223455555433211111 12345689999999999999999999999887665543
Q ss_pred hhhhhhccccCCCCCEEEEeCChhhHHHHHHHHHhhhcCcEEEEeC-CCHHHHHHHHHhhCCeEEEeCcHHHHHHHHHHH
Q 014951 160 DQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWR-GDVRYLMEDIQELKPTMFSGVPRVYDRIYTGIS 238 (415)
Q Consensus 160 ~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~vv~~~-~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~ 238 (415)
...+ .+..++++++.+|++|.+++...+...+.|+..++.. .++..+++.++++++|++.++|++++.+++...
T Consensus 215 ~~~~-----~~~~~~~~l~~~pl~h~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~ 289 (545)
T PRK08162 215 ILAW-----GMPKHPVYLWTLPMFHCNGWCFPWTVAARAGTNVCLRKVDPKLIFDLIREHGVTHYCGAPIVLSALINAPA 289 (545)
T ss_pred HHhc-----CCCCCCeeEeccCcHhhhhHHHHHHHHHHccEEEEeCCCCHHHHHHHHHHcCCeEEEechHHHHHHHhCcc
Confidence 3322 5677889999999999998876444433444444444 499999999999999999999999998865211
Q ss_pred HhhhcCChhhHHHHHHHHHhhhhccccCCCCCCccchhhHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHHHhcCCce
Q 014951 239 NKISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPL 318 (415)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~~G~~~~~~~~~~~~~~~~~~~ 318 (415)
.. . ..+ .+.+.++++|+++++++.+++++ ++.++
T Consensus 290 ~~-------------------------------------~-------~~~-~~~~~~~~~g~~~~~~~~~~~~~-~~~~~ 323 (545)
T PRK08162 290 EW-------------------------------------R-------AGI-DHPVHAMVAGAAPPAAVIAKMEE-IGFDL 323 (545)
T ss_pred cc-------------------------------------c-------cCC-ccceEEEECCCCCCHHHHHHHHH-hCCce
Confidence 00 0 000 13455678999999999998876 58999
Q ss_pred EEeeccCCCCceeeeecCCc-c---------cccCcccccccC-eEEEEeecCCCCCCCCCCCCCCeEEEecCCcccccc
Q 014951 319 TQGYGLTESCSGCFTSLADV-F---------NMIGTVGVPMTT-VEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYY 387 (415)
Q Consensus 319 ~~~yG~tE~~~~~~~~~~~~-~---------~~~~~~G~~~~g-~~~~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gY~ 387 (415)
++.||+||+++.+....... . ....++|.+.+. ..++|+|.+++..++.+.++.|||+++|+.++.||+
T Consensus 324 ~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~~~~g~~~Gel~v~g~~~~~gY~ 403 (545)
T PRK08162 324 THVYGLTETYGPATVCAWQPEWDALPLDERAQLKARQGVRYPLQEGVTVLDPDTMQPVPADGETIGEIMFRGNIVMKGYL 403 (545)
T ss_pred eecccccccCcceeecccccccccCCccchhhccCCCCcccCCcceEEEEcCCCCcccCCCCCceeEEEEecCcchhhhc
Confidence 99999999865544332110 0 112456766553 457777723343333222347999999999999999
Q ss_pred CCchhhhhhhcCCceecCceEEEcCCCC
Q 014951 388 KRPDLTEEVIVDGWFHTGDIGEWQPMEL 415 (415)
Q Consensus 388 ~~~~~~~~~~~~g~~~TGDlg~~d~~G~ 415 (415)
++++.+...|.+|||+|||+|++|+||+
T Consensus 404 ~~~~~~~~~~~~g~~~TGDl~~~d~dg~ 431 (545)
T PRK08162 404 KNPKATEEAFAGGWFHTGDLAVLHPDGY 431 (545)
T ss_pred CChhhhHHHhhCCCcccCceEEEcCCcc
Confidence 9999999999999999999999999985
No 108
>PRK09192 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.4e-43 Score=349.91 Aligned_cols=340 Identities=21% Similarity=0.308 Sum_probs=255.3
Q ss_pred CccCCCCCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCCCCC-------HHHHHHHHHhcCceEEEEcCCChhhhhhc
Q 014951 1 MRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLG-------ANAVEFIINHAEVSIAFVQENKIPSILSC 73 (415)
Q Consensus 1 L~~~Gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~-------~~~l~~~l~~~~~~~ii~~~~~~~~~~~~ 73 (415)
|++.|+++||+|+++++|+++++++++||+++|++++|+++.++ .+++.++++.++++++|+++...+.+...
T Consensus 66 L~~~gi~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~v~i~~~~~~~~~~~~~~~l~~~i~~~~~~~il~~~~~~~~~~~~ 145 (579)
T PRK09192 66 LLALGLKPGDRVALIAETDGDFVEAFFACQYAGLVPVPLPLPMGFGGRESYIAQLRGMLASAQPAAIITPDELLPWVNEA 145 (579)
T ss_pred HHHhCCCCCCEEEEEcCCchhHHHHHHHHHHcCCeeEeccCCcccccchHHHHHHHHHHHhcCCCEEEeChHHHHHHHHh
Confidence 45679999999999999999999999999999999999986543 58999999999999999998776655443
Q ss_pred CccCCCCccEEEEecCCCchhhHHhhhcCceeecHHHHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEeecHHHH
Q 014951 74 LPRCCLYLKTIVSFANVSSSQKKEAEELGVSCFSWEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIV 153 (415)
Q Consensus 74 ~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~th~~l~ 153 (415)
.... ..+. ...+.++..........+...++++++++|||||||.||+|+++|++++
T Consensus 146 ~~~~----~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~sh~~~~ 202 (579)
T PRK09192 146 THGN----PLLH-------------------VLSHAWFKALPEADVALPRPTPDDIAYLQYSSGSTRFPRGVIITHRALM 202 (579)
T ss_pred hccc----cccc-------------------eeehhhhcccCCCccccCCCCCCCeEEEEecCCCCCCCceEEeeHHHHH
Confidence 2111 0111 1112222111111112234567899999999999999999999999999
Q ss_pred HHhhhhhh-hhhhccccCCCCCEEEEeCChhhHHHHHH-HHHhhhcCcEEEEeCC-----CHHHHHHHHHhhCCeEEEeC
Q 014951 154 AEVLSVDQ-MFVVTGKVCSEEDTYFSFLPLAHIYDQII-ETHCIHKGCSIGFWRG-----DVRYLMEDIQELKPTMFSGV 226 (415)
Q Consensus 154 ~~~~~~~~-~~~~~~~~~~~~d~~l~~~p~~~~~~~~~-~~~~l~~G~~vv~~~~-----~~~~~~~~i~~~~~t~~~~~ 226 (415)
........ .+ .+..+|+++.++|++|.+++.. ++.++..|+++++.+. ++..+++.+.+++++.++..
T Consensus 203 ~~~~~~~~~~~-----~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~ 277 (579)
T PRK09192 203 ANLRAISHDGL-----KVRPGDRCVSWLPFYHDMGLVGFLLTPVATQLSVDYLPTRDFARRPLQWLDLISRNRGTISYSP 277 (579)
T ss_pred HHHHHHHhhcc-----cCCCCCeEEEeCCCCCcchhHHHHHHHHHhCCeeEeeCHHHHHHCHHHHHHHHHhcCcEEEeCC
Confidence 88876554 44 6788999999999999999875 5667888999877652 68899999999999987765
Q ss_pred cHHHHHHHHHHHHhhhcCChhhHHHHHHHHHhhhhccccCCCCCCccchhhHHHHHHHHHHhCCceeEEEEecCCCCHHH
Q 014951 227 PRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHV 306 (415)
Q Consensus 227 P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~~G~~~~~~~ 306 (415)
|..+..+...... ......++ +++|.+++||+++++++
T Consensus 278 ~~~~~l~~~~~~~----------------------------------~~~~~~~l--------~~lr~~~~gG~~l~~~~ 315 (579)
T PRK09192 278 PFGYELCARRVNS----------------------------------KDLAELDL--------SCWRVAGIGADMIRPDV 315 (579)
T ss_pred cHHHHHHHHhhcc----------------------------------ccccccch--------hhhheeEecCccCCHHH
Confidence 5544443321100 00011112 37899999999999999
Q ss_pred HHHHHHhcC------CceEEeeccCCCCceeeeecCCcc---------------------------cccCcccccccCeE
Q 014951 307 EEFLRVTSG------APLTQGYGLTESCSGCFTSLADVF---------------------------NMIGTVGVPMTTVE 353 (415)
Q Consensus 307 ~~~~~~~~~------~~~~~~yG~tE~~~~~~~~~~~~~---------------------------~~~~~~G~~~~g~~ 353 (415)
.+.+.+.++ ..+++.||+||++..+........ ...+++|+|+|+++
T Consensus 316 ~~~~~~~~~~~g~~~~~~~~~yG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~p~~~ 395 (579)
T PRK09192 316 LHQFAEAFAPAGFDDKAFMPSYGLAEATLAVSFSPLGSGIVVEEVDRDRLEYQGKAVAPGAETRRVRTFVNCGKALPGHE 395 (579)
T ss_pred HHHHHHHHHhcCCChhhcccccccccceeEEeccCCCCCceEEEEcHHHhcCCceeeccCCCCccceeEeecCCcCCCcE
Confidence 998888763 358999999999876554322110 11257899999999
Q ss_pred EEEeecCCCCCCCCCCCCCCeEEEecCCccccccCCchhhhhhh-cCCceecCceEEEcCCCC
Q 014951 354 ARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVI-VDGWFHTGDIGEWQPMEL 415 (415)
Q Consensus 354 ~~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gY~~~~~~~~~~~-~~g~~~TGDlg~~d~~G~ 415 (415)
++|+| +++.. ++.++.|||+++|+.++.|||++ +.+.+.+ .+|||+|||+|++ ++|+
T Consensus 396 v~i~d-~~~~~--~~~g~~Gel~i~g~~~~~gY~~~-~~~~~~~~~dgw~~TGDlg~~-~~G~ 453 (579)
T PRK09192 396 IEIRN-EAGMP--LPERVVGHICVRGPSLMSGYFRD-EESQDVLAADGWLDTGDLGYL-LDGY 453 (579)
T ss_pred EEEEC-CCCCC--CCCCCEEEEEecCCchhhhhcCC-ccccccccCCceeeccceeeE-ECCE
Confidence 99999 66654 44568999999999999999999 5666666 7899999999999 7774
No 109
>PRK08279 long-chain-acyl-CoA synthetase; Validated
Probab=100.00 E-value=4.6e-43 Score=347.95 Aligned_cols=349 Identities=17% Similarity=0.216 Sum_probs=258.3
Q ss_pred CccCCCCCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEcCCChhhhhhcCccCCCC
Q 014951 1 MRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLY 80 (415)
Q Consensus 1 L~~~Gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~ 80 (415)
|.+.|+++||+|+++++|+++++++++||+++|++++++++.++.+++.++++.++++++|++.+..+.+....... ..
T Consensus 79 L~~~g~~~gd~V~i~~~n~~~~v~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~-~~ 157 (600)
T PRK08279 79 AAARGVGKGDVVALLMENRPEYLAAWLGLAKLGAVVALLNTQQRGAVLAHSLNLVDAKHLIVGEELVEAFEEARADL-AR 157 (600)
T ss_pred HHhcCCCCCCEEEEECCCCHHHHHHHHHHHhcCcEEeecCCCCCHHHHHHHHHhcCCCEEEEChHHHHHHHHHhhhh-cc
Confidence 45679999999999999999999999999999999999999999999999999999999999988776655433322 12
Q ss_pred ccEEEEecCCCchhhHHhhhcCceeecHHHHHhcCCC--CCCCCCCCCCCeEEEEecCCCCCCCceEEeecHHHHHHhhh
Q 014951 81 LKTIVSFANVSSSQKKEAEELGVSCFSWEEFLQLGTL--DCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLS 158 (415)
Q Consensus 81 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~~ 158 (415)
...++..+..... ....+.++.+....... .........+++++|+|||||||.||+|++||+++..++..
T Consensus 158 ~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~il~TSGTTG~PKgV~~sh~~l~~~~~~ 230 (600)
T PRK08279 158 PPRLWVAGGDTLD-------DPEGYEDLAAAAAGAPTTNPASRSGVTAKDTAFYIYTSGTTGLPKAAVMSHMRWLKAMGG 230 (600)
T ss_pred cceEEEecCcccc-------ccccHHHHhhhcccCCccCCCcccCCCccccEEEEEcCCCCCCCcEEEEeHHHHHHHHHH
Confidence 2233333221100 00011122222111111 11123346789999999999999999999999999999888
Q ss_pred hhhhhhhccccCCCCCEEEEeCChhhHHHHHH-HHHhhhcCcEEEEeCC-CHHHHHHHHHhhCCeEEEeCcHHHHHHHHH
Q 014951 159 VDQMFVVTGKVCSEEDTYFSFLPLAHIYDQII-ETHCIHKGCSIGFWRG-DVRYLMEDIQELKPTMFSGVPRVYDRIYTG 236 (415)
Q Consensus 159 ~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~-~~~~l~~G~~vv~~~~-~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~ 236 (415)
....+ .+.++|++++.+|++|.+++.. ++.++..|+++++.+. ++..+++.++++++|++.++|++++.+++.
T Consensus 231 ~~~~~-----~l~~~d~~l~~~pl~h~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~p~l~~~l~~~ 305 (600)
T PRK08279 231 FGGLL-----RLTPDDVLYCCLPLYHNTGGTVAWSSVLAAGATLALRRKFSASRFWDDVRRYRATAFQYIGELCRYLLNQ 305 (600)
T ss_pred HHHhc-----CCCCCcEEEEecCchhhhhHHHHHHHHHhcCcEEEEcCCCCHHHHHHHHHHhcceEEeehHHHHHHHHhC
Confidence 76665 7889999999999999999886 4456888898888776 999999999999999999999999877541
Q ss_pred HHHhhhcCChhhHHHHHHHHHhhhhccccCCCCCCccchhhHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHHHhcCC
Q 014951 237 ISNKISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGA 316 (415)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~~G~~~~~~~~~~~~~~~~~ 316 (415)
... ... ...++|.+ +|+++++++.+.+.+.++.
T Consensus 306 ~~~-------------------------------------~~~--------~~~~l~~~--~g~~l~~~~~~~~~~~~~~ 338 (600)
T PRK08279 306 PPK-------------------------------------PTD--------RDHRLRLM--IGNGLRPDIWDEFQQRFGI 338 (600)
T ss_pred CCC-------------------------------------ccc--------cCcceeEE--ecCCCCHHHHHHHHHHhCc
Confidence 000 000 00256654 4778999999999988886
Q ss_pred -ceEEeeccCCCCceeeeecCCcccccCccccccc----CeEE---------EEeecCCCCCCCCCCCCCCeEE--EecC
Q 014951 317 -PLTQGYGLTESCSGCFTSLADVFNMIGTVGVPMT----TVEA---------RLESVPEMGYDALSSVPRGEIC--LRGN 380 (415)
Q Consensus 317 -~~~~~yG~tE~~~~~~~~~~~~~~~~~~~G~~~~----g~~~---------~i~~~~~~~~~~~~~~~~Gel~--v~~~ 380 (415)
.+++.||+||++..+.. . ....+++|.+.+ +..+ .+.+ .++....++.|+.|||+ +.++
T Consensus 339 ~~l~~~YG~tE~~~~~~~-~---~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~-~~~~~~~~~~g~~Gel~~~i~~~ 413 (600)
T PRK08279 339 PRILEFYAASEGNVGFIN-V---FNFDGTVGRVPLWLAHPYAIVKYDVDTGEPVRD-ADGRCIKVKPGEVGLLIGRITDR 413 (600)
T ss_pred ceeeeeecccccceeecc-c---CCCCcccccccccccccceeeeeccCcCceeeC-CCCccccCCCCCceeEEEEecCc
Confidence 59999999998754332 1 123367776655 3332 2233 33333456778999998 7799
Q ss_pred CccccccCCchhhhhhh-------cCCceecCceEEEcCCCC
Q 014951 381 TLFSGYYKRPDLTEEVI-------VDGWFHTGDIGEWQPMEL 415 (415)
Q Consensus 381 ~~~~gY~~~~~~~~~~~-------~~g~~~TGDlg~~d~~G~ 415 (415)
.++.|| ++++.+.+.| .++||+|||+|++|+||+
T Consensus 414 ~~~~GY-~~~~~t~~~~~~~~~~~~~~~~~TGDlg~~~~dG~ 454 (600)
T PRK08279 414 GPFDGY-TDPEASEKKILRDVFKKGDAWFNTGDLMRDDGFGH 454 (600)
T ss_pred cccccc-CCchhhHHHHhhcccCCCCceEeecceEEEcCCcc
Confidence 999999 8888888775 257999999999999985
No 110
>PRK04813 D-alanine--poly(phosphoribitol) ligase subunit 1; Provisional
Probab=100.00 E-value=9.7e-43 Score=339.23 Aligned_cols=334 Identities=21% Similarity=0.248 Sum_probs=263.3
Q ss_pred CccCCCCCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEcCCChhhhhhcCccCCCC
Q 014951 1 MRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLY 80 (415)
Q Consensus 1 L~~~Gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~ 80 (415)
|.+.|+++||+|+++++|+.+++++++||+++|++++|+++.++.+++..+++..+++++|++++..... ..
T Consensus 44 l~~~g~~~~~~v~~~~~~~~~~~~~~~a~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~ 115 (503)
T PRK04813 44 IDSLKLPDKSPIIVFGHMSPEMLATFLGAVKAGHAYIPVDVSSPAERIEMIIEVAKPSLIIATEELPLEI--------LG 115 (503)
T ss_pred HHHhCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEecCCCCChHHHHHHHHHhcCCCEEEecccccccc--------cC
Confidence 3567999999999999999999999999999999999999999999999999999999999987651100 00
Q ss_pred ccEEEEecCCCchhhHHhhhcCceeecHHHHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEeecHHHHHHhhhhh
Q 014951 81 LKTIVSFANVSSSQKKEAEELGVSCFSWEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVD 160 (415)
Q Consensus 81 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~~~~ 160 (415)
. .++..+ ++.+...............++++++++|||||||.||+|.++|.++........
T Consensus 116 ~-~~~~~~------------------~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~t~~~~~~~~~~~~ 176 (503)
T PRK04813 116 I-PVITLD------------------ELKDIFATGNPYDFDHAVKGDDNYYIIFTSGTTGKPKGVQISHDNLVSFTNWML 176 (503)
T ss_pred C-cEEehH------------------HhhhhhhccccccccccCCCCCcEEEEECCCCCCCCcEEEeehHHHHHHHHHHH
Confidence 0 111110 111111111111112345678899999999999999999999999998877765
Q ss_pred hhhhhccccCCCCCEEEEeCChhhHHHHHHHHHhhhcCcEEEEeCC----CHHHHHHHHHhhCCeEEEeCcHHHHHHHHH
Q 014951 161 QMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG----DVRYLMEDIQELKPTMFSGVPRVYDRIYTG 236 (415)
Q Consensus 161 ~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~vv~~~~----~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~ 236 (415)
..+ .+..+++++...|++|..+...++.++..|+++++.+. ++..+++.++++++|++.++|++++.+...
T Consensus 177 ~~~-----~~~~~~~~~~~~p~~~~~~~~~~~~~l~~g~~~v~~~~~~~~~~~~~~~~~~~~~~t~~~~~p~~~~~~~~~ 251 (503)
T PRK04813 177 EDF-----ALPEGPQFLNQAPYSFDLSVMDLYPTLASGGTLVALPKDMTANFKQLFETLPQLPINVWVSTPSFADMCLLD 251 (503)
T ss_pred HHc-----CCCcCceeeecCCcchhHhHHHHHHHHhcCCEEEEcChhhhcCHHHHHHHHHHcCCeEEEeChHHHHHHHHh
Confidence 554 67889999999999999998878889999999998764 789999999999999999999999876431
Q ss_pred HHHhhhcCChhhHHHHHHHHHhhhhccccCCCCCCccchhhHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHHHhc-C
Q 014951 237 ISNKISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTS-G 315 (415)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~~G~~~~~~~~~~~~~~~-~ 315 (415)
.. ....+ .+++|.++++|+++++.+.+++.+.+ +
T Consensus 252 ~~-------------------------------------~~~~~--------~~~l~~i~~~G~~l~~~~~~~~~~~~~~ 286 (503)
T PRK04813 252 PS-------------------------------------FNEEH--------LPNLTHFLFCGEELPHKTAKKLLERFPS 286 (503)
T ss_pred hc-------------------------------------cCccc--------CCCceEEEEecCcCCHHHHHHHHHHCCC
Confidence 10 00000 13799999999999999999999888 6
Q ss_pred CceEEeeccCCCCceeeeecCCc----ccccCcccccccCeEEEEeecCCCCCCCCCCCCCCeEEEecCCccccccCCch
Q 014951 316 APLTQGYGLTESCSGCFTSLADV----FNMIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPD 391 (415)
Q Consensus 316 ~~~~~~yG~tE~~~~~~~~~~~~----~~~~~~~G~~~~g~~~~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gY~~~~~ 391 (415)
..+++.||+||++..+....... .....++|++.++++++|++ +++.. ++.++.|||+++|+.++.||+++++
T Consensus 287 ~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~d-~~~~~--~~~g~~Gel~v~~~~~~~gy~~~~~ 363 (503)
T PRK04813 287 ATIYNTYGPTEATVAVTSIEITDEMLDQYKRLPIGYAKPDSPLLIID-EEGTK--LPDGEQGEIVISGPSVSKGYLNNPE 363 (503)
T ss_pred ceEEeCcccchheeEEEEEEecccccccCCCCcccccCCCCEEEEEC-CCCCC--CCCCCceEEEEeccccccccCCChh
Confidence 78999999999976554332211 12236799999999999999 66654 4566899999999999999999999
Q ss_pred hhhhhhc--CC--ceecCceEEEcCCCC
Q 014951 392 LTEEVIV--DG--WFHTGDIGEWQPMEL 415 (415)
Q Consensus 392 ~~~~~~~--~g--~~~TGDlg~~d~~G~ 415 (415)
.+...|. +| ||+|||+|++ ++|+
T Consensus 364 ~~~~~~~~~~g~~~~~tGD~~~~-~~g~ 390 (503)
T PRK04813 364 KTAEAFFTFDGQPAYHTGDAGYL-EDGL 390 (503)
T ss_pred HhHHhhccCCCceeEECCceEEe-eCCe
Confidence 9998872 44 9999999999 7774
No 111
>PRK05850 acyl-CoA synthetase; Validated
Probab=100.00 E-value=3.6e-43 Score=347.48 Aligned_cols=345 Identities=19% Similarity=0.278 Sum_probs=247.2
Q ss_pred ccCCCCCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCC---CCCHHHHHHHHHhcCceEEEEcCCChhhhhhcCccC-
Q 014951 2 RSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYD---TLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRC- 77 (415)
Q Consensus 2 ~~~Gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~---~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~- 77 (415)
.+.| ++||+|+++++|+++++++++||+++|++++|+++ ..+.+++.+++++++++++|++++..+.+.......
T Consensus 53 ~~~g-~~gd~V~l~~~n~~~~~~~~lA~~~~G~v~vpl~~~~~~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~ 131 (578)
T PRK05850 53 RRHG-STGDRAVILAPQGLEYIVAFLGALQAGLIAVPLSVPQGGAHDERVSAVLRDTSPSVVLTTSAVVDDVTEYVAPQP 131 (578)
T ss_pred HHhC-CCCCEEEEEcCCcccHHHHHHHHHHcCceEEecCCCCccchHHHHHHHHHhcCCCEEEEcHHHHHHHHHHHhhcc
Confidence 4567 68999999999999999999999999999999997 557899999999999999999987666554321110
Q ss_pred CCCccEEEEecCCCchhhHHhhhcCceeecHHHHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEeecHHHHHHhh
Q 014951 78 CLYLKTIVSFANVSSSQKKEAEELGVSCFSWEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVL 157 (415)
Q Consensus 78 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~ 157 (415)
......++..+.. ++.... ........++++++++|||||||.||+|.++|++++.++.
T Consensus 132 ~~~~~~~~~~~~~-------------------~~~~~~--~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~ 190 (578)
T PRK05850 132 GQSAPPVIEVDLL-------------------DLDSPR--GSDARPRDLPSTAYLQYTSGSTRTPAGVMVSHRNVIANFE 190 (578)
T ss_pred cccccceEeeccc-------------------ccccCC--ccccCCCCCCCeEEEEeCCCCCCCCceEEEeHHHHHHHHH
Confidence 0011112221110 000000 0111234568999999999999999999999999988776
Q ss_pred hhhhhh-hhccccCCCCCEEEEeCChhhHHHHHH-HHHhhhcCcEEEEeCC-----CHHHHHHHHHhhCCeEEEeCcHHH
Q 014951 158 SVDQMF-VVTGKVCSEEDTYFSFLPLAHIYDQII-ETHCIHKGCSIGFWRG-----DVRYLMEDIQELKPTMFSGVPRVY 230 (415)
Q Consensus 158 ~~~~~~-~~~~~~~~~~d~~l~~~p~~~~~~~~~-~~~~l~~G~~vv~~~~-----~~~~~~~~i~~~~~t~~~~~P~~~ 230 (415)
.....+ .........++++++++|++|..++.. ++.+++.|+++++.+. ++..+++.+++++++++ .+|.++
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~~~~~~~~~~~~~p~~~~~~i~~~~~~~~-~~p~~~ 269 (578)
T PRK05850 191 QLMSDYFGDTGGVPPPDTTVVSWLPFYHDMGLVLGVCAPILGGCPAVLTSPVAFLQRPARWMQLLASNPHAFS-AAPNFA 269 (578)
T ss_pred HHHHhhccccccCCCCcceEEEECCCCCCchhHHHHHHHHhcCCcEEEeCHHHHHHCHHHHHHHHHHcCCeEE-eCCcHH
Confidence 543321 111112456889999999999999875 7888999999998863 68999999999999865 566554
Q ss_pred HHHHH-HHHHhhhcCChhhHHHHHHHHHhhhhccccCCCCCCccchhhHHHHHHHHHHhCCceeEEEEecCCCCHHHHHH
Q 014951 231 DRIYT-GISNKISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEF 309 (415)
Q Consensus 231 ~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~~G~~~~~~~~~~ 309 (415)
..++. .... ......++ +++|.+++||+++++++.++
T Consensus 270 ~~~~~~~~~~----------------------------------~~~~~~~~--------~~lr~~~~gg~~~~~~~~~~ 307 (578)
T PRK05850 270 FELAVRKTSD----------------------------------DDMAGLDL--------GGVLGIISGSERVHPATLKR 307 (578)
T ss_pred HHHHHHhcch----------------------------------hhhcCcch--------hhheeEEECcCCCCHHHHHH
Confidence 33321 1000 00000111 37899999999999999999
Q ss_pred HHHhcC------CceEEeeccCCCCceeeeecCCcc------------------------cccCcccccccCeEEEEeec
Q 014951 310 LRVTSG------APLTQGYGLTESCSGCFTSLADVF------------------------NMIGTVGVPMTTVEARLESV 359 (415)
Q Consensus 310 ~~~~~~------~~~~~~yG~tE~~~~~~~~~~~~~------------------------~~~~~~G~~~~g~~~~i~~~ 359 (415)
|.+.++ ..+++.||+||++..+........ ....++|.|. +.+++|+|
T Consensus 308 ~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~g~p~-~~~~~ivd- 385 (578)
T PRK05850 308 FADRFAPFNLRETAIRPSYGLAEATVYVATREPGQPPESVRFDYEKLSAGHAKRCETGGGTPLVSYGSPR-SPTVRIVD- 385 (578)
T ss_pred HHHHHHhcCcCcccccCccchhhhhhheeccCCCCCceEEEECHHHHhCCceEecCCCCCceEEeccCCC-CCEEEEEc-
Confidence 888763 368999999998765443221100 0012345553 57899998
Q ss_pred CCCCCCCCCCCCCCeEEEecCCccccccCCchhhhhhhc------------CCceecCceEEEcCCCC
Q 014951 360 PEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVIV------------DGWFHTGDIGEWQPMEL 415 (415)
Q Consensus 360 ~~~~~~~~~~~~~Gel~v~~~~~~~gY~~~~~~~~~~~~------------~g~~~TGDlg~~d~~G~ 415 (415)
+++. .+++.|+.|||+++|+.++.||+++++.+.+.|. +|||+|||+|++| ||+
T Consensus 386 ~~~~-~~~~~g~~Gel~v~g~~~~~gY~~~~~~t~~~f~~~~~~~~~~~~~~~w~~TGDl~~~~-~G~ 451 (578)
T PRK05850 386 PDTC-IECPAGTVGEIWVHGDNVAAGYWQKPEETERTFGATLVDPSPGTPEGPWLRTGDLGFIS-EGE 451 (578)
T ss_pred CCCC-cCCCCCCEEEEEEecCcccccccCChhhhHHHhhcccccccccCCCCCeeeccceeeEE-CCE
Confidence 5433 4466789999999999999999999999998883 5799999999998 774
No 112
>PRK07768 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=3.5e-42 Score=338.18 Aligned_cols=339 Identities=20% Similarity=0.245 Sum_probs=255.4
Q ss_pred CccCCCCCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCCCCCHHHH-------HHHHHhcCceEEEEcCCChhhhhhc
Q 014951 1 MRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAV-------EFIINHAEVSIAFVQENKIPSILSC 73 (415)
Q Consensus 1 L~~~Gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l-------~~~l~~~~~~~ii~~~~~~~~~~~~ 73 (415)
|.+.|+++||+|+++++|+++++++++||+++|++++++++..+.+++ ..+++.++++.+|+++.....+...
T Consensus 46 L~~~g~~~gd~V~l~~~~~~~~~~~~la~~~~g~v~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 125 (545)
T PRK07768 46 LAAAGVGPGDAVAVLAGAPVEIAPTAQGLWMRGASLTMLHQPTPRTDLAVWAEDTLRVIGMIGAKAVVVGEPFLAAAPVL 125 (545)
T ss_pred HHHhCCCCCCEEEEECCCchHHHHHHHHHHHcCccccccCCCCCcchhHHHHHHHHHHHHhCCCCEEEecchhhhhhhhh
Confidence 456899999999999999999999999999999999999998886554 4567778999999987654332211
Q ss_pred CccCCCCccEEEEecCCCchhhHHhhhcCceeecHHHHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEeecHHHH
Q 014951 74 LPRCCLYLKTIVSFANVSSSQKKEAEELGVSCFSWEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIV 153 (415)
Q Consensus 74 ~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~th~~l~ 153 (415)
... ......++++..... .......++++++++|||||||.||+|+++|+++.
T Consensus 126 ~~~-------------------------~~~~~~~~~l~~~~~--~~~~~~~~~~~a~i~~TSGtTG~PKgv~~s~~~~~ 178 (545)
T PRK07768 126 EEK-------------------------GIRVLTVADLLAADP--IDPVETGEDDLALMQLTSGSTGSPKAVQITHGNLY 178 (545)
T ss_pred ccc-------------------------CCceeehhhhcccCC--CCcCCCCCCCEEEEEeCCCCCCCCceEEEcHHHHH
Confidence 100 011223333332211 12234467999999999999999999999999999
Q ss_pred HHhhhhhhhhhhccccCCCC-CEEEEeCChhhHHHHHH-HHHhhhcCcEEEEeCC-----CHHHHHHHHHhhCCeEEEeC
Q 014951 154 AEVLSVDQMFVVTGKVCSEE-DTYFSFLPLAHIYDQII-ETHCIHKGCSIGFWRG-----DVRYLMEDIQELKPTMFSGV 226 (415)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~-d~~l~~~p~~~~~~~~~-~~~~l~~G~~vv~~~~-----~~~~~~~~i~~~~~t~~~~~ 226 (415)
..+......+ .+..+ |++++++|++|..++.. ++.++..|+++++.+. ++..+++.+++++++++..+
T Consensus 179 ~~~~~~~~~~-----~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~~v~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 253 (545)
T PRK07768 179 ANAEAMFVAA-----EFDVETDVMVSWLPLFHDMGMVGFLTVPMYFGAELVKVTPMDFLRDPLLWAELISKYRGTMTAAP 253 (545)
T ss_pred HHHHHHHHhc-----CCCCCCceeEEeCCCccchHHHHHHHHHHHCCceEEEeCHHHHHHhHHHHHHHHHHhCCEEEECc
Confidence 8877665554 55555 89999999999999875 5567999999988753 67888999999999998777
Q ss_pred cHHHHHHHHHHHHhhhcCChhhHHHHHHHHHhhhhccccCCCCCCccchhhHHHHHHHHHHhCCceeEEEEecCCCCHHH
Q 014951 227 PRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHV 306 (415)
Q Consensus 227 P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~~G~~~~~~~ 306 (415)
|..+..+...+...... ...++ +++|.++++|+++++++
T Consensus 254 ~~~~~~l~~~~~~~~~~---------------------------------~~~~~--------~~lr~~~~~g~~~~~~~ 292 (545)
T PRK07768 254 NFAYALLARRLRRQAKP---------------------------------GAFDL--------SSLRFALNGAEPIDPAD 292 (545)
T ss_pred hHHHHHHHHHHhccccc---------------------------------cCCCc--------hheeeEEeccCCCCHHH
Confidence 77776654422111000 00111 37999999999999999
Q ss_pred HHHHHHh---cCC---ceEEeeccCCCCceeeeecCCc-------------------------ccccCcccccccCeEEE
Q 014951 307 EEFLRVT---SGA---PLTQGYGLTESCSGCFTSLADV-------------------------FNMIGTVGVPMTTVEAR 355 (415)
Q Consensus 307 ~~~~~~~---~~~---~~~~~yG~tE~~~~~~~~~~~~-------------------------~~~~~~~G~~~~g~~~~ 355 (415)
.+++.+. ++. .+++.||+||++..+....... ....+++|+|+++++++
T Consensus 293 ~~~~~~~~~~~g~~~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~g~~~~ 372 (545)
T PRK07768 293 VEDLLDAGARFGLRPEAILPAYGMAEATLAVSFSPCGAGLVVDEVDADLLAALRRAVPATKGNTRRLATLGPPLPGLEVR 372 (545)
T ss_pred HHHHHHHHHhcCCCcccccccccccccceEEEccCCCCCcceeeechhHhhccCceeccCCCCcceEEeccCCCCCCEEE
Confidence 9988764 554 4999999999987654432211 11236899999999999
Q ss_pred EeecCCCCCCCCCCCCCCeEEEecCCccccccCCchhhhhhhcCCceecCceEEEcCCCC
Q 014951 356 LESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVIVDGWFHTGDIGEWQPMEL 415 (415)
Q Consensus 356 i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gY~~~~~~~~~~~~~g~~~TGDlg~~d~~G~ 415 (415)
|++ +++.. ++.++.|||+++|+.++.||++++......+.+|||+|||+|++|+||+
T Consensus 373 i~~-~~~~~--~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGDl~~~~~~g~ 429 (545)
T PRK07768 373 VVD-EDGQV--LPPRGVGVIELRGESVTPGYLTMDGFIPAQDADGWLDTGDLGYLTEEGE 429 (545)
T ss_pred EEC-CCCCC--CCCCCEEEEEEccCcccccccCCCCCcccccCCCeeeccceEEEecCCE
Confidence 999 77654 4567999999999999999998765555445789999999999999884
No 113
>KOG1175 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=100.00 E-value=6.8e-43 Score=328.29 Aligned_cols=353 Identities=20% Similarity=0.257 Sum_probs=278.2
Q ss_pred CccCCCCCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEcCCChhhhhh--------
Q 014951 1 MRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILS-------- 72 (415)
Q Consensus 1 L~~~Gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~-------- 72 (415)
|+..|+++||+|++++|+.+|++++++||+++|++..++...+++.++..+++.+++|++|+.+........
T Consensus 113 l~~~g~~kGD~V~~~mPm~~e~~ia~lA~~r~Gai~~~v~~~fs~~~l~~Rl~~~~~k~i~t~d~~~~~~k~i~~~~~~~ 192 (626)
T KOG1175|consen 113 LRKCGLKKGDTVAIYMPMIPEAVIAMLACARIGAIHSSVFAGFSAKELLDRLQDSKAKVIITQDVVARGGKSINLKCIVL 192 (626)
T ss_pred HHhcCCCCCcEEEEeccCChHHHHHHHHHhhcCeEEEEeeccCCHHHHHHHHHhcCCCEEEEEeeeccCCCccchhhhHH
Confidence 346799999999999999999999999999999999999999999999999999999999998854322111
Q ss_pred -cCccC---CCCccEEEEecCCCchhhHHhhhcCceeecHHHHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEee
Q 014951 73 -CLPRC---CLYLKTIVSFANVSSSQKKEAEELGVSCFSWEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLT 148 (415)
Q Consensus 73 -~~~~~---~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t 148 (415)
+.... .......+.+... .....|+++........+..+.+.+|+.+|+|||||||.||++.++
T Consensus 193 ~a~~~~~~~~~~~~~~~~~~~~------------~~d~~~~~~~~~a~~~~~~~~~~~edpl~IlfTSGtTg~PK~v~ht 260 (626)
T KOG1175|consen 193 EALLLVSDKSRPVWLDLIVSRR------------NRDLFWSLELKKASPEHPCVPVKAEDPLFILFTSGTTGKPKGVIHT 260 (626)
T ss_pred HHhhcccccccccceeeEEecc------------cccccHHHHhhhcCCCCCceecCccCceEEEecCCCCCCCCceeec
Confidence 11100 0010111111111 0123455554444334446778899999999999999999999999
Q ss_pred cHHHHHHh-hhhhhhhhhccccCCCCCEEEEeCChhhHHHHHH-HHHhhhcCcEEEEeCC---CHHHHHHHHHhhCCeEE
Q 014951 149 NQAIVAEV-LSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQII-ETHCIHKGCSIGFWRG---DVRYLMEDIQELKPTMF 223 (415)
Q Consensus 149 h~~l~~~~-~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~-~~~~l~~G~~vv~~~~---~~~~~~~~i~~~~~t~~ 223 (415)
+...+... ......+ ++++.|++++...+.|+.+.++ .+.+|+.|+++++.+. ++..+++.+.++++|++
T Consensus 261 ~~g~ll~~~~~~~~~~-----d~q~~dv~~~~~d~GWi~g~~~~~~gpl~~Ga~~vl~~g~p~~~~~~~~~v~k~~it~l 335 (626)
T KOG1175|consen 261 TGGYLLGAALTSRYHF-----DLQPSDVLWCASDLGWITGHSYVLYGPLLNGATVVLYEGPPFDPGRIWKILDKYKVTVL 335 (626)
T ss_pred cCcchHHHhhhcceec-----cCCCcceEEEecccCeeeccchhhhhhhhcCcEEEEEcCCCCChhhhhhhHhhcceEEE
Confidence 87655444 3433434 8899999999999999999887 6679999999999865 88999999999999999
Q ss_pred EeCcHHHHHHHHHHHHhhhcCChhhHHHHHHHHHhhhhccccCCCCCCccchhhHHHHHHHHHHhCCceeEEEEecCCCC
Q 014951 224 SGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLP 303 (415)
Q Consensus 224 ~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~~G~~~~ 303 (415)
++.|+.++.+........ ....+ ++||.+.++|||++
T Consensus 336 ~t~pt~~r~l~~~~~~~~-----------------------------------~~~~~--------~sLk~~~S~Gepi~ 372 (626)
T KOG1175|consen 336 YTAPTAYRLLRRLGQEDV-----------------------------------TSYSL--------KSLRTCGSVGEPIN 372 (626)
T ss_pred EeccHHHHHHHHhccccc-----------------------------------ccccc--------ceEEEEeecCccCC
Confidence 999999997654111110 00000 27999999999999
Q ss_pred HHHHHHHHHhcCC-ceEEeeccCCCCceeeeecCCc-ccccCcccccccCeEEEEeecCCCCCCCCCCCCCCeEEEecC-
Q 014951 304 IHVEEFLRVTSGA-PLTQGYGLTESCSGCFTSLADV-FNMIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGN- 380 (415)
Q Consensus 304 ~~~~~~~~~~~~~-~~~~~yG~tE~~~~~~~~~~~~-~~~~~~~G~~~~g~~~~i~~~~~~~~~~~~~~~~Gel~v~~~- 380 (415)
++..+++.+.++. +|++.||+||+|..+....+.. ..++++.+.|.+|..+.|.| +++...+... +.|||+++.+
T Consensus 373 ~~~~ew~~~~~~~~pv~e~~~qtEtG~~~i~~~~g~~p~~pg~~~~p~~g~~v~i~d-e~g~~~~~~~-~~G~l~~~~~~ 450 (626)
T KOG1175|consen 373 PEAWEWWKRVTGLDPIYETYGQTETGGICITPKPGKLPIKPGSAGKPFPGYDVQILD-ENGNELPPST-GNGELRLKPPW 450 (626)
T ss_pred cchHHHHHHhcCccchhhceeeeccCceeeeccCCCCCcCccccCCCCCCcceEEEC-CCCCCcCCCC-ceeEEEEeCCC
Confidence 9999999999988 6999999999999988877766 55669999999999999999 6776555544 8999999874
Q ss_pred --CccccccCCchhhhhhh-c--CCceecCceEEEcCCCC
Q 014951 381 --TLFSGYYKRPDLTEEVI-V--DGWFHTGDIGEWQPMEL 415 (415)
Q Consensus 381 --~~~~gY~~~~~~~~~~~-~--~g~~~TGDlg~~d~~G~ 415 (415)
+.+++||+|++....++ . .|||.|||.|++|+|||
T Consensus 451 P~~~~r~~~~n~erf~~~yf~k~pg~y~tGD~~~rd~dGY 490 (626)
T KOG1175|consen 451 PPGMFRTLWGNHERFRAAYFKKFPGYYFTGDGGRRDEDGY 490 (626)
T ss_pred CccccccccCCHHHhhhhhcccCCceEEecCceEEcCCce
Confidence 77999999999655554 3 78999999999999997
No 114
>PRK09029 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=100.00 E-value=1.9e-42 Score=332.83 Aligned_cols=302 Identities=29% Similarity=0.381 Sum_probs=245.7
Q ss_pred CccCCCCCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEcCCChhhhhhcCccCCCC
Q 014951 1 MRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLY 80 (415)
Q Consensus 1 L~~~Gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~ 80 (415)
|.+.|+++||+|+++++|+++++++++||+++|++++|+++..+.+++..+++.+++++++++++... +.. .
T Consensus 45 L~~~g~~~~~~v~l~~~~~~~~~~~~la~~~~G~~~v~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~-~------ 116 (458)
T PRK09029 45 FAQQGVVEGSGVALRGKNSPETLLAYLALLQCGARVLPLNPQLPQPLLEELLPSLTLDFALVLEGENT-FSA-L------ 116 (458)
T ss_pred HHHcCCCCCCEEEEecCCCHHHHHHHHHHHHcCCEEeecCCCCCHHHHHHHHHhcCCCEEEEcCcccc-hhh-c------
Confidence 35679999999999999999999999999999999999999999999999999999999998876422 100 0
Q ss_pred ccEEEEecCCCchhhHHhhhcCceeecHHHHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEeecHHHHHHhhhhh
Q 014951 81 LKTIVSFANVSSSQKKEAEELGVSCFSWEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVD 160 (415)
Q Consensus 81 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~~~~ 160 (415)
.... ... ..........++++++++|||||||.||+|.+||+++...+....
T Consensus 117 -~~~~----------------------~~~-----~~~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~ 168 (458)
T PRK09029 117 -TSLH----------------------LQL-----VEGAHAVAWQPQRLATMTLTSGSTGLPKAAVHTAQAHLASAEGVL 168 (458)
T ss_pred -cccc----------------------ccc-----ccccCcccCCCCCeEEEEECCCCCCCCCEEEEeHHHHHHHHHHHh
Confidence 0000 000 001112344678999999999999999999999999999888766
Q ss_pred hhhhhccccCCCCCEEEEeCChhhHHHHHHHHHhhhcCcEEEEeCCCHHHHHHHHHhhCCeEEEeCcHHHHHHHHHHHHh
Q 014951 161 QMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRGDVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNK 240 (415)
Q Consensus 161 ~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~vv~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~ 240 (415)
..+ ....+|+++..+|++|.+++...+.++..|+++++.+. ..+++.++ ++|.+..+|+++..+......
T Consensus 169 ~~~-----~~~~~~~~l~~~p~~h~~g~~~~~~~l~~G~~v~~~~~--~~~~~~i~--~~t~~~~~P~~~~~l~~~~~~- 238 (458)
T PRK09029 169 SLM-----PFTAQDSWLLSLPLFHVSGQGIVWRWLYAGATLVVRDK--QPLEQALA--GCTHASLVPTQLWRLLDNRSE- 238 (458)
T ss_pred hcC-----CCCccceEEEecCcHhhhhhHHHHHHHhCCceEEeCCh--HHHHHHHh--hceeeecChHHHHHHHhcccc-
Confidence 555 67789999999999999998777788999999998764 55667763 799999999999887541100
Q ss_pred hhcCChhhHHHHHHHHHhhhhccccCCCCCCccchhhHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHHHhcCCceEE
Q 014951 241 ISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQ 320 (415)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~~G~~~~~~~~~~~~~~~~~~~~~ 320 (415)
..++|.+++||+++++.+.+++.+ ++.++++
T Consensus 239 ------------------------------------------------~~~l~~i~~gG~~~~~~~~~~~~~-~g~~~~~ 269 (458)
T PRK09029 239 ------------------------------------------------PLSLKAVLLGGAAIPVELTEQAEQ-QGIRCWC 269 (458)
T ss_pred ------------------------------------------------CCcceEEEECCCCCCHHHHHHHHH-cCCcEec
Confidence 026899999999999999999886 5999999
Q ss_pred eeccCCCCceeeeecCCcccccCcccccccCeEEEEeecCCCCCCCCCCCCCCeEEEecCCccccccCCchhhhhhhcCC
Q 014951 321 GYGLTESCSGCFTSLADVFNMIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVIVDG 400 (415)
Q Consensus 321 ~yG~tE~~~~~~~~~~~~~~~~~~~G~~~~g~~~~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gY~~~~~~~~~~~~~g 400 (415)
.||+||++........+ ...++|+|+++++++|++ |||+++|+.++.||+++++.+.....+|
T Consensus 270 ~YG~tE~~~~~~~~~~~---~~~~~G~~~~~~~~~i~~--------------gel~v~g~~~~~gY~~~~~~~~~~~~~~ 332 (458)
T PRK09029 270 GYGLTEMASTVCAKRAD---GLAGVGSPLPGREVKLVD--------------GEIWLRGASLALGYWRQGQLVPLVNDEG 332 (458)
T ss_pred cccccccCcceeccCCC---CCCCCCCCCCCCEEEEeC--------------CEEEEecCceeeeeecCccccccccCCC
Confidence 99999998755433322 125699999999999977 8999999999999999998887666789
Q ss_pred ceecCceEEEcCCCC
Q 014951 401 WFHTGDIGEWQPMEL 415 (415)
Q Consensus 401 ~~~TGDlg~~d~~G~ 415 (415)
||+|||+|++| ||+
T Consensus 333 ~~~TGD~~~~~-~g~ 346 (458)
T PRK09029 333 WFATRDRGEWQ-NGE 346 (458)
T ss_pred ccCCCCcEEEe-CCE
Confidence 99999999999 774
No 115
>PRK07798 acyl-CoA synthetase; Validated
Probab=100.00 E-value=3.9e-41 Score=330.38 Aligned_cols=356 Identities=21% Similarity=0.239 Sum_probs=265.2
Q ss_pred CccCCCCCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEcCCChhhhhhcCccCCCC
Q 014951 1 MRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLY 80 (415)
Q Consensus 1 L~~~Gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~ 80 (415)
|.+.|+++||+|+++++|+++++++++||+++|++++++++.++.+++.+++++++++++|++.+....+.+.... .+.
T Consensus 45 L~~~g~~~~~~v~v~~~n~~~~~~~~~a~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 123 (533)
T PRK07798 45 LIAQGLGPGDHVGIYARNRIEYVEAMLGAFKARAVPVNVNYRYVEDELRYLLDDSDAVALVYEREFAPRVAEVLPR-LPK 123 (533)
T ss_pred HHHcCCCCCCEEEEEcCCCHHHHHHHHHHHhcCeEEEecCcCCCHHHHHHHHhhcCCCEEEEchhhHHHHHHHhcc-CCC
Confidence 3567999999999999999999999999999999999999999999999999999999999998776666554332 244
Q ss_pred ccEEEEecCCCchhhHHhhhcCceeecHHHHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEeecHHHHHHhhhhh
Q 014951 81 LKTIVSFANVSSSQKKEAEELGVSCFSWEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVD 160 (415)
Q Consensus 81 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~~~~ 160 (415)
.+.++.++...... .......++++........... ...++.++++|||||||.||+|+++|.++........
T Consensus 124 ~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~~TSGTTG~PK~v~~s~~~~~~~~~~~~ 196 (533)
T PRK07798 124 LRTLVVVEDGSGND------LLPGAVDYEDALAAGSPERDFG-ERSPDDLYLLYTGGTTGMPKGVMWRQEDIFRVLLGGR 196 (533)
T ss_pred ccEEEEecCCcccc------cCCccccHHHHHhccCCcCCCC-CCCCCceEEEECCCCCCCCcEEEEecHHHHHHHhhhh
Confidence 55666665432110 0012345666654432111111 2334567999999999999999999999886554322
Q ss_pred hhhh----hccccC------CCCCEEEEeCChhhHHHHHHHHHhhhcCcEEEEeC--C-CHHHHHHHHHhhCCeEEEeCc
Q 014951 161 QMFV----VTGKVC------SEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWR--G-DVRYLMEDIQELKPTMFSGVP 227 (415)
Q Consensus 161 ~~~~----~~~~~~------~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~vv~~~--~-~~~~~~~~i~~~~~t~~~~~P 227 (415)
..+. .....+ ..+++++..+|++|..++...+.+++.|+++++.+ . ++..+++.++++++|.+.++|
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~~ 276 (533)
T PRK07798 197 DFATGEPIEDEEELAKRAAAGPGMRRFPAPPLMHGAGQWAAFAALFSGQTVVLLPDVRFDADEVWRTIEREKVNVITIVG 276 (533)
T ss_pred hhhcccchhhhhhhcccccCCCCceEEEecchhhhhhHHHHHHHHhcCceEEEecCCCcCHHHHHHHHHHhCCeEEEech
Confidence 1110 001111 56789999999999999988889999999999998 4 899999999999999999998
Q ss_pred HHHHH-HHHHHHHhhhcCChhhHHHHHHHHHhhhhccccCCCCCCccchhhHHHHHHHHHHhCCceeEEEEecCCCCHHH
Q 014951 228 RVYDR-IYTGISNKISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHV 306 (415)
Q Consensus 228 ~~~~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~~G~~~~~~~ 306 (415)
..+.. +.+.+. . ......+++|.+++||+++++++
T Consensus 277 ~~~~~~l~~~~~-~-------------------------------------------~~~~~~~~l~~i~~gG~~~~~~~ 312 (533)
T PRK07798 277 DAMARPLLDALE-A-------------------------------------------RGPYDLSSLFAIASGGALFSPSV 312 (533)
T ss_pred HHHHHHHHHHhc-c-------------------------------------------cccCCCCceEEEEECCCCCCHHH
Confidence 76643 222111 0 00001148999999999999999
Q ss_pred HHHHHHhc-CCceEEeeccCCCCceeeeecCCcccccCccc--ccccCeEEEEeecCCCCCCCCCCCCC--CeEEEecCC
Q 014951 307 EEFLRVTS-GAPLTQGYGLTESCSGCFTSLADVFNMIGTVG--VPMTTVEARLESVPEMGYDALSSVPR--GEICLRGNT 381 (415)
Q Consensus 307 ~~~~~~~~-~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~G--~~~~g~~~~i~~~~~~~~~~~~~~~~--Gel~v~~~~ 381 (415)
.+++++.+ +..+++.||+||++........... ...| ++.++..++|++ +++...+ .|+. |+|+ +++.
T Consensus 313 ~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~---~~~g~~~~~~~~~~~i~~-~~~~~~~--~g~~~~g~l~-~~~~ 385 (533)
T PRK07798 313 KEALLELLPNVVLTDSIGSSETGFGGSGTVAKGA---VHTGGPRFTIGPRTVVLD-EDGNPVE--PGSGEIGWIA-RRGH 385 (533)
T ss_pred HHHHHHHcCCCeEEeeecccccccccccCCCCCC---ccCCCCccCCCceEEEEC-CCCCCCC--CCCCCeeEEE-eecC
Confidence 99999888 7899999999998655443322111 2333 788999999999 7776444 4455 6665 5668
Q ss_pred ccccccCCchhhhhhhc----CCceecCceEEEcCCCC
Q 014951 382 LFSGYYKRPDLTEEVIV----DGWFHTGDIGEWQPMEL 415 (415)
Q Consensus 382 ~~~gY~~~~~~~~~~~~----~g~~~TGDlg~~d~~G~ 415 (415)
++.||+++++.+.+.|. ++||+|||+|++|+||+
T Consensus 386 ~~~gy~~~~~~t~~~f~~~~~~~~~~TGD~~~~~~~g~ 423 (533)
T PRK07798 386 IPLGYYKDPEKTAETFPTIDGVRYAIPGDRARVEADGT 423 (533)
T ss_pred ccccccCChhhhHHhhccCCCCceEEcCcEEEEcCCCc
Confidence 99999999999998883 35999999999999985
No 116
>PTZ00297 pantothenate kinase; Provisional
Probab=100.00 E-value=6.2e-41 Score=346.68 Aligned_cols=376 Identities=19% Similarity=0.275 Sum_probs=288.0
Q ss_pred CccCCCCCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEcCCChhhhhhcCccCCCC
Q 014951 1 MRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLY 80 (415)
Q Consensus 1 L~~~Gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~ 80 (415)
|.+.||++||+|+|+++|++||+++++||+++|++++|+++ +.+++.+++++++++++|++.+....+..... ..
T Consensus 474 L~~lGV~~GDrVaIls~N~~Ewvia~lA~~~~GaV~VPly~--t~~eL~yIL~~S~akvVfv~~~~l~kl~~i~~---~~ 548 (1452)
T PTZ00297 474 LLALGVRPGDVIGVDCEASRNIVILEVACALYGFTTLPLVG--KGSTMRTLIDEHKIKVVFADRNSVAAILTCRS---RK 548 (1452)
T ss_pred HHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEeCCC--CHHHHHHHHHhcCCcEEEEchhHHHHHHhhcc---cC
Confidence 46789999999999999999999999999999999999975 46799999999999999999887777665432 36
Q ss_pred ccEEEEecCCCchhh-HHhhhcCceeecHHHHHhcCCC--CCCCCCCCCCCeEEEEe---cCCCCCCCceEEeecHHHHH
Q 014951 81 LKTIVSFANVSSSQK-KEAEELGVSCFSWEEFLQLGTL--DCELPPKKKTNISTIMY---TSGTTGEPKGVVLTNQAIVA 154 (415)
Q Consensus 81 ~~~v~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~i~~---TSGtTG~pK~v~~th~~l~~ 154 (415)
++.+++++....... ......+.....|+++...+.. ........++|++.|+| ||||||.||||++||+|++.
T Consensus 549 Lr~IIv~d~~~~~~~~~~~~~~~i~~~s~~~ll~~G~~~~~~~~~~~~~dDlatIiYtSyTSGTTG~PKGVmLTH~Nlla 628 (1452)
T PTZ00297 549 LETVVYTHSFYDEDDHAVARDLNITLIPYEFVEQKGRLCPVPLKEHVTTDTVFTYVVDNTTSASGDGLAVVRVTHADVLR 628 (1452)
T ss_pred CcEEEEECCCcccccccccccCCcceeeHHHHHhcCcccCccccCCCCcccEEEEEecCCCCCCCcCCcEEEEeHHHHHH
Confidence 788998864211000 0000112345678888876521 11123347789999996 99999999999999999999
Q ss_pred HhhhhhhhhhhccccCCCCCEEEEeCChhhHHHHHHHHHhhhcCcEEEEeCCCHHHHHHHHHhhCCeEEEeCcHHHHHHH
Q 014951 155 EVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRGDVRYLMEDIQELKPTMFSGVPRVYDRIY 234 (415)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~vv~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~ 234 (415)
++......... .....+|++++++|++|+++....+.+++.|+++.+. ++..+++.|++++||++.++|++++.+.
T Consensus 629 ~~~~~~~~~~~--~~~~~~D~~Ls~LPLaHI~er~~~~~~l~~G~~I~~~--d~~~lledL~~~rPTv~~~VPrv~ekI~ 704 (1452)
T PTZ00297 629 DISTLVMTGVL--PSSFKKHLMVHFTPFAMLFNRVFVLGLFAHGSAVATV--DAAHLQRAFVKFQPTILVAAPSLFSTSR 704 (1452)
T ss_pred HHHHHhhhccc--cCCCCCCEEEEechHHHHHHHHHHHHHHHcCCEEEeC--CHHHHHHHHHHHCCEEEEecHHHHHHHH
Confidence 98875432100 1345789999999999999977777889999998754 7899999999999999999999999999
Q ss_pred HHHHHhhhcCChhhHHHHHHHHHhhhhccccCCCCCCccchhhHHHHHHHHHHhCCceeEEEEecC--CCCHHHHHHHHH
Q 014951 235 TGISNKISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAA--PLPIHVEEFLRV 312 (415)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~~G~--~~~~~~~~~~~~ 312 (415)
+.+..+........+++|+++++.+....+.+. .....++.+.++++|..+|.++|.+++||+ +++..+.
T Consensus 705 ~~i~~~~~~~~~~~~~lf~~A~~~k~~~~~~g~---~~~~l~d~LVf~kir~~lGGrlr~~isGga~~~l~~~l~----- 776 (1452)
T PTZ00297 705 LQLSRANERYSAVYSWLFERAFQLRSRLINIHR---RDSSLLRFIFFRATQELLGGCVEKIVLCVSEESTSFSLL----- 776 (1452)
T ss_pred HHHHHHhhhhhHHHHHHHHHHHHHHHHHHhcCC---CCcHHHHHHHHHHHHHHhcCCeEEEEECCCccccChHHh-----
Confidence 988888887788899999999887765444332 234477889999999999999999999984 4443332
Q ss_pred hcCCceEEeeccCCCCceeeeecCCcccccCcccccccCeEEEEeecCCCCCCCCCCCCCCeEEEecCCccccccCCchh
Q 014951 313 TSGAPLTQGYGLTESCSGCFTSLADVFNMIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDL 392 (415)
Q Consensus 313 ~~~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~G~~~~g~~~~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gY~~~~~~ 392 (415)
.++++..+||+||+. +.+.+... ...|.|+||+++||.+.++.+.. ...|||+++ |+++|+.
T Consensus 777 -~~i~i~~g~glTE~~---~~~~~~~~---~~~G~PlpgvEvKI~~~~E~~~~----~~~GEIlvr-------~~kdpe~ 838 (1452)
T PTZ00297 777 -EHISVCYVPCLREVF---FLPSEGVF---CVDGTPAPSLQVDLEPFDEPSDG----AGIGQLVLA-------KKGEPRR 838 (1452)
T ss_pred -CCceEEEecceEEee---eecCCCCc---ccCCeecCceEEEEcccccccCC----CCCCeEEEE-------ECCChHH
Confidence 267799999999942 33333322 22399999999999874443321 246999995 4589999
Q ss_pred hhhhhcCCceecCceEEEcC
Q 014951 393 TEEVIVDGWFHTGDIGEWQP 412 (415)
Q Consensus 393 ~~~~~~~g~~~TGDlg~~d~ 412 (415)
|.+. .+||+..|.+--+|.
T Consensus 839 T~e~-~~gW~~dG~L~IidR 857 (1452)
T PTZ00297 839 TLPI-AAQWKRDRTLRLLGP 857 (1452)
T ss_pred HHHh-hCcCccCCeEEEEec
Confidence 9874 479999888776553
No 117
>PRK08308 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.9e-39 Score=307.66 Aligned_cols=279 Identities=18% Similarity=0.204 Sum_probs=232.3
Q ss_pred cCCCCCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEcCCChhhhhhcCccCCCCcc
Q 014951 3 SRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLK 82 (415)
Q Consensus 3 ~~Gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~ 82 (415)
..|+++|++|+++++|+++++++++|++++|++++||++..+.+++..++++++++.+++++.... ..
T Consensus 26 ~~~~~~g~~V~i~~~~~~~~~~~~la~~~~G~~~v~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-----~~------- 93 (414)
T PRK08308 26 QFQEAAGNRFAVCLKDPFDIITLVFFLKEKGASVLPIHPDTPKEAAIRMAKRAGCHGLLYGESDFT-----KL------- 93 (414)
T ss_pred HcCCCCCCEEEEECCCChHHHHHHHHHHHCCeEEEecCCCCCHHHHHHHHHhCCCCEEEecCcccc-----cc-------
Confidence 357999999999999999999999999999999999999999999999999999999998763100 00
Q ss_pred EEEEecCCCchhhHHhhhcCceeecHHHHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEeecHHHHHHhhhhhhh
Q 014951 83 TIVSFANVSSSQKKEAEELGVSCFSWEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQM 162 (415)
Q Consensus 83 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~~~~~~ 162 (415)
......++++++++|||||||.||+|.+||+++..++..+...
T Consensus 94 -------------------------------------~~~~~~~~~~~~i~~TSGtTG~PKgv~~s~~~l~~~~~~~~~~ 136 (414)
T PRK08308 94 -------------------------------------EAVNYLAEEPSLLQYSSGTTGEPKLIRRSWTEIDREIEAYNEA 136 (414)
T ss_pred -------------------------------------cCCCCCCCCceEEEECCCCCCCCcEEEEehHhHHHHHHHHHHh
Confidence 0012346789999999999999999999999999888776665
Q ss_pred hhhccccCCCCCEEEEeCChhhHHHHHH-HHHhhhcCcEEEEeCC-CHHHHHHHHHhhCCeEEEeCcHHHHHHHHHHHHh
Q 014951 163 FVVTGKVCSEEDTYFSFLPLAHIYDQII-ETHCIHKGCSIGFWRG-DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNK 240 (415)
Q Consensus 163 ~~~~~~~~~~~d~~l~~~p~~~~~~~~~-~~~~l~~G~~vv~~~~-~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~ 240 (415)
+ ....+|+.+..+|++|.+++.. ++.++..|+++++.+. ++..+++.++++++|.++++|+++..+.+...
T Consensus 137 ~-----~~~~~~~~~~~~p~~h~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~-- 209 (414)
T PRK08308 137 L-----NCEQDETPIVACPVTHSYGLICGVLAALTRGSKPVIITNKNPKFALNILRNTPQHILYAVPLMLHILGRLLP-- 209 (414)
T ss_pred h-----CCCcccEEEEecCcHHHHHHHHHHHHHHHcCCEEEecCCCCHHHHHHHHHHhCCeEEEcCHHHHHHHHhcCC--
Confidence 5 6678899999999999999864 7788999999988876 99999999999999999999999988754110
Q ss_pred hhcCChhhHHHHHHHHHhhhhccccCCCCCCccchhhHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHHHhcCCceEE
Q 014951 241 ISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQ 320 (415)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~~G~~~~~~~~~~~~~~~~~~~~~ 320 (415)
. ..+++.++++|+++++++.+.+++. +.++++
T Consensus 210 ------------------------------------~-----------~~~l~~~~~~G~~l~~~~~~~~~~~-~~~~~~ 241 (414)
T PRK08308 210 ------------------------------------G-----------TFQFHAVMTSGTPLPEAWFYKLRER-TTYMMQ 241 (414)
T ss_pred ------------------------------------c-----------cccccEEEEccCCCCHHHHHHHHHh-CChhhh
Confidence 0 0257889999999999999998875 678999
Q ss_pred eeccCCCCceeeeecCCcccccCcccccccCeEEEEeecCCCCCCCCCCCCCCeEEEecCCccccccCCchhhhhhhcCC
Q 014951 321 GYGLTESCSGCFTSLADVFNMIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVIVDG 400 (415)
Q Consensus 321 ~yG~tE~~~~~~~~~~~~~~~~~~~G~~~~g~~~~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gY~~~~~~~~~~~~~g 400 (415)
.||+||++.+.... + ....+++|+|+|++++++.+ ++ ++.|||++++. ++
T Consensus 242 ~YG~tE~~~~~~~~--~-~~~~~~~G~p~~~~~~~~~~-~~--------~~~gel~v~~~------------------~~ 291 (414)
T PRK08308 242 QYGCSEAGCVSICP--D-MKSHLDLGNPLPHVSVSAGS-DE--------NAPEEIVVKMG------------------DK 291 (414)
T ss_pred ccCccccCCeeecC--C-CCCCCccCccCCCeEEEEec-CC--------CCCceEEEEcC------------------Cc
Confidence 99999998644322 1 12347899999999999876 32 36799999752 57
Q ss_pred ceecCceEEEcCCCC
Q 014951 401 WFHTGDIGEWQPMEL 415 (415)
Q Consensus 401 ~~~TGDlg~~d~~G~ 415 (415)
||+|||+|++|+||+
T Consensus 292 ~~~TGDl~~~~~dg~ 306 (414)
T PRK08308 292 EIFTKDLGYKSERGT 306 (414)
T ss_pred eEECCceEEECCCcc
Confidence 999999999999984
No 118
>PRK07868 acyl-CoA synthetase; Validated
Probab=100.00 E-value=4.7e-39 Score=332.33 Aligned_cols=342 Identities=14% Similarity=0.151 Sum_probs=236.7
Q ss_pred CccCCCCCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEcCCChhhhhhcCccCCCC
Q 014951 1 MRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLY 80 (415)
Q Consensus 1 L~~~Gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~ 80 (415)
|++.|+++||+|+|+++|+++++++++||+++|++++||+|. +++.++++.++++++|++.+..+.+...
T Consensus 489 L~~~Gv~~Gd~VaI~~~n~~e~v~a~lA~~~aGav~vpl~p~---~~l~~il~~s~~~~li~~~~~~~~~~~~------- 558 (994)
T PRK07868 489 LIAVGVRQGDRVGVLMETRPSALVAIAALSRLGAVAVLMPPD---TDLAAAVRLGGVTEIITDPTNLEAARQL------- 558 (994)
T ss_pred HHHcCCCCCCEEEEEcCCCHHHHHHHHHHHhcCCEEEEeCCc---hhHHHHHhccCCeEEEEChHHHHHHHhc-------
Confidence 457899999999999999999999999999999999999984 6899999999999999987766554321
Q ss_pred ccEEEEecCCCchhhHHhhhcCceeecHHHHHhcC-CCC--CCCCCCCCCCeEEEEecCCCCCCCceEEeecHHHHHHhh
Q 014951 81 LKTIVSFANVSSSQKKEAEELGVSCFSWEEFLQLG-TLD--CELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVL 157 (415)
Q Consensus 81 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~ 157 (415)
...++.++......... ........+++..... ..+ ....+..++|+++|+|| ||||.||++.++|.+......
T Consensus 559 ~~~iiv~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dd~a~IiyT-gStgtpKpk~vt~~~~~~~~~ 635 (994)
T PRK07868 559 PGRVLVLGGGESRDLDL--PDDADVIDMEKIDPDAVELPGWYRPNPGLARDLAFIAFS-TAGGELVAKQITNYRWALSAF 635 (994)
T ss_pred CceEEEecCCccccccC--CcchhhhhhhhcCcccccCCcccCCCCCCCCccEEEEEe-CCCCCcCcEEEehHHHHHHHH
Confidence 13445543211000000 0000011111111100 000 00112236899999998 588888888888877655443
Q ss_pred hhhhhhhhccccCCCCCEEEEeCChhhHHHHHHHH-HhhhcCcEEEEeCC-CHHHHHHHHHhhCCeEEEeCcHHHHHHHH
Q 014951 158 SVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIET-HCIHKGCSIGFWRG-DVRYLMEDIQELKPTMFSGVPRVYDRIYT 235 (415)
Q Consensus 158 ~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~-~~l~~G~~vv~~~~-~~~~~~~~i~~~~~t~~~~~P~~~~~l~~ 235 (415)
.....+ .+..+|++++.+|++|.+++...+ ..+..|+++++.+. ++..+++.|++++||+++++|+++..+++
T Consensus 636 ~~~~~~-----~l~~~d~~L~~~Pl~h~~gl~~~l~~~l~gG~~vvl~~~~~~~~~~~~I~~~~vT~~~~~Ps~l~~L~~ 710 (994)
T PRK07868 636 GTASAA-----ALDRRDTVYCLTPLHHESGLLVSLGGAVVGGSRIALSRGLDPDRFVQEVRQYGVTVVSYTWAMLREVVD 710 (994)
T ss_pred hhhhhc-----CCCCCCeEEEecChHHHhHHHHHHHHHhccceEEEecCCCCHHHHHHHHHHhCCcEEEeHHHHHHHHHh
Confidence 333333 678899999999999999998655 44556666666554 99999999999999999999999988764
Q ss_pred HHHHhhhcCChhhHHHHHHHHHhhhhccccCCCCCCccchhhHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHHHhcC
Q 014951 236 GISNKISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSG 315 (415)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~~G~~~~~~~~~~~~~~~~ 315 (415)
... ....+ .+++|.++ |+.+++++.+.+.+.++
T Consensus 711 ~~~-------------------------------------~~~~~--------~~slr~~~--g~gl~~~l~~~~~~~~~ 743 (994)
T PRK07868 711 DPA-------------------------------------FVLHG--------NHPVRLFI--GSGMPTGLWERVVEAFA 743 (994)
T ss_pred CcC-------------------------------------CccCC--------CCceEEEe--cCCCCHHHHHHHHHHhC
Confidence 100 00000 03788776 34499999999998886
Q ss_pred -CceEEeeccCCCCceeeeecCCcccccCcccccccCe-EEEEeec----------CCCCCCCCCCCCCCeEEEecCCcc
Q 014951 316 -APLTQGYGLTESCSGCFTSLADVFNMIGTVGVPMTTV-EARLESV----------PEMGYDALSSVPRGEICLRGNTLF 383 (415)
Q Consensus 316 -~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~G~~~~g~-~~~i~~~----------~~~~~~~~~~~~~Gel~v~~~~~~ 383 (415)
.++++.||+||++..... . . ..+.+++|+|+||+ +++|.+. +++....++.|+.|||+++++..
T Consensus 744 ~~~l~~~YG~TE~~~~~~~-~-~-~~~~~svG~p~pg~~~v~i~~~d~~~g~li~d~~G~~~~~~~ge~Gel~~~~~~~- 819 (994)
T PRK07868 744 PAHVVEFFATTDGQAVLAN-V-S-GAKIGSKGRPLPGAGRVELAAYDPEHDLILEDDRGFVRRAEVNEVGVLLARARGP- 819 (994)
T ss_pred chheeeeeecccccccccc-c-C-CCCCcccCCccCCCCceeEEEecCcCCceeecCCceEEEcCCCCceEEEEecCCC-
Confidence 789999999998754332 1 1 22348999999998 6766421 23311335677999999999853
Q ss_pred ccccCCchhhhh--hh--cCCceecCceEEEcCCCC
Q 014951 384 SGYYKRPDLTEE--VI--VDGWFHTGDIGEWQPMEL 415 (415)
Q Consensus 384 ~gY~~~~~~~~~--~~--~~g~~~TGDlg~~d~~G~ 415 (415)
+ +|+.+.. .| .+|||+|||+|++|+||+
T Consensus 820 ---~-~p~~t~~~~~~~~~dgw~~TGDlg~~d~dG~ 851 (994)
T PRK07868 820 ---I-DPTASVKRGVFAPADTWISTEYLFRRDDDGD 851 (994)
T ss_pred ---C-ChhhhhHhcccccCCEEEeccceEEEcCCCC
Confidence 3 3444322 24 379999999999999996
No 119
>KOG1179 consensus Very long-chain acyl-CoA synthetase/fatty acid transporter [Lipid transport and metabolism]
Probab=100.00 E-value=3.6e-37 Score=278.06 Aligned_cols=350 Identities=16% Similarity=0.166 Sum_probs=258.7
Q ss_pred CccCCCCCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEcCCChhhhhhcCccCCCC
Q 014951 1 MRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLY 80 (415)
Q Consensus 1 L~~~Gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~ 80 (415)
|...|++.||.||+.|+|.+|++.++|+++++|++.+.||+++..+.|.|.+..++++.+|++.+..+.+.+..+.....
T Consensus 121 ~~~~~l~~GD~VAL~men~pefv~lWlGLaKlGv~tA~iNtNlR~~~LlHsi~~s~aralv~~~el~~~~~e~~~~l~~~ 200 (649)
T KOG1179|consen 121 LHAEGLKAGDVVALLMENRPEFVALWLGLAKLGVITAFINTNLRGEPLLHSITVSGARALVVGPELLNALEEILPLLIKN 200 (649)
T ss_pred HHHhhcccCCEEEEecCCChhHHHHHHhHHhhCceeeeeccccccchhhhhhhhcCceEEEECHHHHHHHHhcchhhhhc
Confidence 34678999999999999999999999999999999999999999999999999999999999999888877764433222
Q ss_pred ccEEEEecCCCchhhHHhhhcCceeecHHHHHhcC-CCC---CCCCCCCCCCeEEEEecCCCCCCCceEEeecHHHHHHh
Q 014951 81 LKTIVSFANVSSSQKKEAEELGVSCFSWEEFLQLG-TLD---CELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEV 156 (415)
Q Consensus 81 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~---~~~~~~~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~ 156 (415)
.-.+...+..... ..+.++.+.++.. ..+ .........++++.||||||||.||+.++||.......
T Consensus 201 ~i~~~~~~~~~~~---------~g~~~L~~~l~~~~~~~vp~~~~~~~~~~s~~lyIYTSGTTGLPKaAvith~r~~~~a 271 (649)
T KOG1179|consen 201 GIHVFSLGPTSVP---------DGIESLLAKLSAAPKHPVPVSTRSGLTFRSPLLYIYTSGTTGLPKAAVITHLRYLQGA 271 (649)
T ss_pred cceEEecCCCCCC---------chHHHHHHhhcccccCCCCcccCCCccccceeEEEEcCCCCCCCHHHHHHHHHHHHHH
Confidence 2233333322111 0122333333332 111 22334567889999999999999999999999999888
Q ss_pred hhhhhhhhhccccCCCCCEEEEeCChhhHHHHHH-HHHhhhcCcEEEEeCC-CHHHHHHHHHhhCCeEEEeCcHHHHHHH
Q 014951 157 LSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQII-ETHCIHKGCSIGFWRG-DVRYLMEDIQELKPTMFSGVPRVYDRIY 234 (415)
Q Consensus 157 ~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~-~~~~l~~G~~vv~~~~-~~~~~~~~i~~~~~t~~~~~P~~~~~l~ 234 (415)
..+...+ .+.++|+++..+|++|..+.+. +..++..|+++++-.. ++.++|+.-.+|+||+++-.-.+++.++
T Consensus 272 ~g~~~~~-----g~~~~DvvY~~lPLYHsaa~ilGi~~~l~~GaT~VlrkKFSAS~FW~DC~k~~~Tv~QYIGElcRYLl 346 (649)
T KOG1179|consen 272 AGFYYVF-----GMTADDVVYTTLPLYHSAAGILGIGGCLLHGATVVLRKKFSASNFWDDCRKYNVTVIQYIGELCRYLL 346 (649)
T ss_pred HHHHHHh-----CCCccceEEEcchhHHHHHHHHHHHHHHhcCceEEEecccchhhhHHHHHHhCCeeeehHHHHHHHHH
Confidence 7665666 8899999999999999988876 7889999999999987 9999999999999999999999998887
Q ss_pred HHHHHhhhcCChhhHHHHHHHHHhhhhccccCCCCCCccchhhHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHHHhc
Q 014951 235 TGISNKISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTS 314 (415)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~~G~~~~~~~~~~~~~~~ 314 (415)
++-.... ....++|..+ |.-+.+++.+.|.+.|
T Consensus 347 ~~p~~~~---------------------------------------------er~HkVRla~--GNGLR~diW~~Fv~RF 379 (649)
T KOG1179|consen 347 NQPPSPE---------------------------------------------ERQHKVRLAY--GNGLRPDIWQQFVKRF 379 (649)
T ss_pred cCCCChh---------------------------------------------hcCceEEEEe--cCCCCchHHHHHHHHc
Confidence 6211100 0013666665 4558999999999999
Q ss_pred CC-ceEEeeccCCCCceeeeecCCcccccCccccc------ccCeEEEEeec--------CCCCCCCCCCCCCCeEEEe-
Q 014951 315 GA-PLTQGYGLTESCSGCFTSLADVFNMIGTVGVP------MTTVEARLESV--------PEMGYDALSSVPRGEICLR- 378 (415)
Q Consensus 315 ~~-~~~~~yG~tE~~~~~~~~~~~~~~~~~~~G~~------~~g~~~~i~~~--------~~~~~~~~~~~~~Gel~v~- 378 (415)
|. +|.+.||+||.....+.. +... |.+|+. +-.+++.-+|. ++|--.++++||+|.+.-+
T Consensus 380 g~~~IgE~YgaTEgn~~~~N~-d~~v---GA~G~~~~~~~~l~p~~LIk~D~~t~E~iRd~~G~Ci~~~~GEpGlLv~~i 455 (649)
T KOG1179|consen 380 GIIKIGEFYGATEGNSNLVNY-DGRV---GACGFMSRLLKLLYPFRLIKVDPETGEPIRDSQGLCIPCPPGEPGLLVGKI 455 (649)
T ss_pred CCCeEEEEeccccCcceeeee-cCcc---ccccchhhhhhhccceEEEEecCCCCceeecCCceEEECCCCCCceEEEEe
Confidence 87 599999999976544433 2211 333321 11122222221 3444467889999976543
Q ss_pred -cCCc---cccccCCchhhhhhh-----c--CCceecCceEEEcCCCC
Q 014951 379 -GNTL---FSGYYKRPDLTEEVI-----V--DGWFHTGDIGEWQPMEL 415 (415)
Q Consensus 379 -~~~~---~~gY~~~~~~~~~~~-----~--~g~~~TGDlg~~d~~G~ 415 (415)
...- +.||.++.++|++.. . |-||.|||+-..|+.||
T Consensus 456 ~~k~P~~~F~GY~g~~~~t~kKl~rDVFkkGD~~f~tGDlLv~D~~Gy 503 (649)
T KOG1179|consen 456 VQKNPLRSFLGYAGPKKATEKKLLRDVFKKGDVYFNTGDLLVADELGY 503 (649)
T ss_pred ccCCchhhhccccCchhhhhhhhHHhhhccCcEEEeeCcEEEEecCCc
Confidence 2233 899999887776653 2 45999999999999996
No 120
>COG1020 EntF Non-ribosomal peptide synthetase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=2.4e-32 Score=273.58 Aligned_cols=335 Identities=22% Similarity=0.261 Sum_probs=262.1
Q ss_pred CccCCCCCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEcCCChhhhhhcCccCCCC
Q 014951 1 MRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLY 80 (415)
Q Consensus 1 L~~~Gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~ 80 (415)
|.+.|++++++|+++++.++++++.++|++++|+.++|+++.++.+.+.+++++++++.+++.......... . +.
T Consensus 269 l~~~g~~~~~~V~i~~~rs~~~i~~~l~ilkaG~~yvP~d~~~P~~r~~~~l~~~~~~~~~~~~~~~~~~~~-~----~~ 343 (642)
T COG1020 269 LISLGVGPGETVAILADRSLELVVALLAVLKAGAAYVPLDPLYPAERLAYILEDSRPTLLLTQAHLRVDDVG-L----PG 343 (642)
T ss_pred HHHcCCCCCCeEEEEcCCCHHHHHHHHHHHhcCCeEecCCCCChHHHHHHHHhhcCccEEEecccccccccc-C----Cc
Confidence 356789999999999999999999999999999999999999999999999999999999998332221000 0 00
Q ss_pred ccEEEEecCCCchhhHHhhhcCceeecHHHHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEeecHHHHHHhhhhh
Q 014951 81 LKTIVSFANVSSSQKKEAEELGVSCFSWEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVD 160 (415)
Q Consensus 81 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~~~~ 160 (415)
+..+... .. ............+++.+|++|||||||.||||..+|+++.+......
T Consensus 344 ----~~~~~~~----------------~~----~~~~~~~~~~~~~~~~ayiiytsgstg~Pkgv~~~h~~~~~~~~~~~ 399 (642)
T COG1020 344 ----LALDDAL----------------SE----IPDTDPIPQALLGDALAYIIYTSGSTGQPKGVRIEHRALANLLNDAG 399 (642)
T ss_pred ----ccccccc----------------cc----CCccCcccccCCCCCeEEEEEccCCCCCCCCceecCHHHHHHHHHHH
Confidence 1111100 00 00001111233568999999999999999999999999999777766
Q ss_pred hhhhhccccCCCCCEEEEeCChhhHHHHHHHHHhhhcCcEEEEeCC----CHHHHHHHHHhhCCeEEEeCcHHHHHHHHH
Q 014951 161 QMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG----DVRYLMEDIQELKPTMFSGVPRVYDRIYTG 236 (415)
Q Consensus 161 ~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~vv~~~~----~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~ 236 (415)
+.+ .....|+++...++.+.......+.++..|+++++.+. ++..+.+.++++++|.+..+|.++..++..
T Consensus 400 ~~~-----~~~~~d~~l~~~s~~fD~~~~~~f~~l~~G~~l~~~~~~~~~~~~~l~~~~~~~~vt~~~~~p~~~~~~~~~ 474 (642)
T COG1020 400 ARF-----GLDADDRVLALASLSFDASVFEIFGALLEGARLVLAPALLQVDPAALLELLEAQGITVLLLVPLLLRLLLLA 474 (642)
T ss_pred Hhc-----CCCcccEEeecCCcccchhHHHHHHHHhCCCEEEecCccccCCHHHHHHHHHHcCCEEEEecHHHHHHHHhc
Confidence 666 77888999999999888888889999999999999875 899999999999999999999999887652
Q ss_pred HHHhhhcCChhhHHHHHHHHHhhhhccccCCCCCCccchhhHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHHHhc--
Q 014951 237 ISNKISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTS-- 314 (415)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~~G~~~~~~~~~~~~~~~-- 314 (415)
....... . ....+|.+++||+.++..+...+....
T Consensus 475 ~~~~~~~--------------------------------------~-----~~~~lr~~~~gGe~l~~~~~~~~~~~~~~ 511 (642)
T COG1020 475 ALAPDLI--------------------------------------S-----PCERLRQLLSGGEALPLALVQRLLQLAAL 511 (642)
T ss_pred hhhcccc--------------------------------------C-----CcccccEEEEcCCCCCHHHHHHHHHhccc
Confidence 0000000 0 002489999999999999988777655
Q ss_pred CCceEEeeccCCCCceeeeecCCcccc-cCcccccccCeEEEEeecCCCCCCCCCCCCCCeEEEecCCccccccCCchhh
Q 014951 315 GAPLTQGYGLTESCSGCFTSLADVFNM-IGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLT 393 (415)
Q Consensus 315 ~~~~~~~yG~tE~~~~~~~~~~~~~~~-~~~~G~~~~g~~~~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gY~~~~~~~ 393 (415)
...+.+.||+||+.............. ..++|+|++++.+.|.| .....++++ ..||+++.|.+++.||+++|++|
T Consensus 512 ~~~l~~~ygpTe~~~~~~~~~~~~~~~~~~piG~p~~n~~~~ild-~~~~~~p~g--v~gel~i~g~~~a~gy~~~p~lt 588 (642)
T COG1020 512 ARRLLNLYGPTEATLDAPSFPISAELESRVPIGRPVANTQLYILD-QGLRPLPLG--VPGELYIAGLGLALGYLNRPDLT 588 (642)
T ss_pred cceEeeccCccHHhhheeeEEcccccCCCCCcceeeCCCeEEEEC-CCCCcCCCC--CCeeeEECCcchhhhhcCChhhh
Confidence 468999999999766554433222211 36899999999999999 666555554 88999999999999999999999
Q ss_pred hhhhcC-CceecCceEEEcCCCC
Q 014951 394 EEVIVD-GWFHTGDIGEWQPMEL 415 (415)
Q Consensus 394 ~~~~~~-g~~~TGDlg~~d~~G~ 415 (415)
.++|.. ++|+|||++++++||.
T Consensus 589 ~~~f~~~~~y~tgD~~r~~~dg~ 611 (642)
T COG1020 589 AERFIALRLYRTGDLARPLADGA 611 (642)
T ss_pred HHHhhhccCccCCCeeeECCCCe
Confidence 999954 5999999999999883
No 121
>PRK07824 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=99.97 E-value=7.9e-30 Score=237.25 Aligned_cols=210 Identities=28% Similarity=0.406 Sum_probs=168.5
Q ss_pred CCCCCCeEEEEecCCCCCCCceEEeecHHHHHHhhhhhhhhhhccccCCCCCEEEEeCChhhHHHHHHHHHhhhcCcEEE
Q 014951 123 PKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIG 202 (415)
Q Consensus 123 ~~~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~vv 202 (415)
...++|+++++|||||||.||+|+++|.++.......... +...++++..+|++|..++..++.++..|++++
T Consensus 31 ~~~~~d~a~il~TSGTTG~PKgv~~s~~~l~~~~~~~~~~-------~~~~~~~~~~~p~~~~~g~~~~~~~l~~g~~~v 103 (358)
T PRK07824 31 EPIDDDVALVVATSGTTGTPKGAMLTAAALTASADATHDR-------LGGPGQWLLALPAHHIAGLQVLVRSVIAGSEPV 103 (358)
T ss_pred CCCCCCeEEEEeCCCCCCCCCEEEecHHHHHHHHHHHHhc-------cCCCCeEEEECChHHHHHHHHHHHHHHcCCeEE
Confidence 3456899999999999999999999999999887664432 235678999999999999887888889999888
Q ss_pred EeC----CCHHHHHHHHHhhC--CeEEEeCcHHHHHHHHHHHHhhhcCChhhHHHHHHHHHhhhhccccCCCCCCccchh
Q 014951 203 FWR----GDVRYLMEDIQELK--PTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLL 276 (415)
Q Consensus 203 ~~~----~~~~~~~~~i~~~~--~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (415)
+.. .++..+++.+++++ .++...+|..+..++....
T Consensus 104 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~p~~l~~~~~~~~-------------------------------------- 145 (358)
T PRK07824 104 ELDVSAGFDPTALPRAVAELGGGRRYTSLVPMQLAKALDDPA-------------------------------------- 145 (358)
T ss_pred ecCcCCCcCHHHHHHHHHHhCCCceEEEecHHHHHHHHhCcc--------------------------------------
Confidence 732 28999999999998 4566678877765432100
Q ss_pred hHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHHHhcCCceEEeeccCCCCceeeeecCCcccccCcccccccCeEEEE
Q 014951 277 DSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQGYGLTESCSGCFTSLADVFNMIGTVGVPMTTVEARL 356 (415)
Q Consensus 277 ~~~~~~~~~~~~~~~lr~v~~~G~~~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~G~~~~g~~~~i 356 (415)
...+ ..++|.+++||+++++++.+++.+ ++.++++.||+||++..+ ...|+|++++++++
T Consensus 146 ~~~~--------~~~l~~i~~gG~~l~~~~~~~~~~-~~~~v~~~YG~TE~~~~~-----------~~~G~~~~g~~v~i 205 (358)
T PRK07824 146 ATAA--------LAELDAVLVGGGPAPAPVLDAAAA-AGINVVRTYGMSETSGGC-----------VYDGVPLDGVRVRV 205 (358)
T ss_pred ccCC--------cccceEEEECCCCCCHHHHHHHHh-cCCcEEecccCCccCCCc-----------CcCceeCCCCEEEe
Confidence 0000 137999999999999999998876 589999999999987543 23589999999998
Q ss_pred eecCCCCCCCCCCCCCCeEEEecCCccccccCCchhhhhhh-cCCceecCceEEEcCCC
Q 014951 357 ESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVI-VDGWFHTGDIGEWQPME 414 (415)
Q Consensus 357 ~~~~~~~~~~~~~~~~Gel~v~~~~~~~gY~~~~~~~~~~~-~~g~~~TGDlg~~d~~G 414 (415)
.+ |||+++|+.++.||+++++.+ .| .+|||+|||+|++ +||
T Consensus 206 ~~--------------Gei~v~g~~~~~gY~~~~~~~--~~~~~g~~~TGDl~~~-~~g 247 (358)
T PRK07824 206 ED--------------GRIALGGPTLAKGYRNPVDPD--PFAEPGWFRTDDLGAL-DDG 247 (358)
T ss_pred cC--------------CEEEEecCccccccCCCcccc--cccCCCceecccEEEE-eCC
Confidence 44 999999999999999988743 34 5789999999999 666
No 122
>TIGR02155 PA_CoA_ligase phenylacetate-CoA ligase. Phenylacetate-CoA ligase (PA-CoA ligase) catalyzes the first step in aromatic catabolism of phenylacetic acid (PA) into phenylacetyl-CoA (PA-CoA). Often located in a conserved gene cluster with enzymes involved in phenylacetic acid activation (paaG/H/I/J), phenylacetate-CoA ligase has been found among the proteobacteria as well as in gram positive prokaryotes. In the B-subclass proteobacterium Azoarcus evansii, phenylacetate-CoA ligase has been shown to be induced under aerobic and anaerobic growth conditions. It remains unclear however, whether this induction is due to the same enzyme or to another isoenzyme restricted to specific anaerobic growth conditions.
Probab=99.94 E-value=1.1e-25 Score=213.71 Aligned_cols=226 Identities=19% Similarity=0.215 Sum_probs=163.2
Q ss_pred CCCCCeEEEEecCCCCCCCceEEeecHHHHHHhhhhhhhhhhccccCCCCCEEEEeCChhhHHHHH-HHHHhhhcCcEEE
Q 014951 124 KKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQI-IETHCIHKGCSIG 202 (415)
Q Consensus 124 ~~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~-~~~~~l~~G~~vv 202 (415)
...++++++++||||||.||++.+||.++..........+.. ..+..+|++++..++.+..+.. ..+..+..|++++
T Consensus 72 ~~~~~~~~~~~TSGTTG~Pk~v~~t~~~~~~~~~~~~~~~~~--~g~~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 149 (422)
T TIGR02155 72 VPREQVVRIHASSGTTGKPTVVGYTQNDIDTWSSVVARSIRA--AGGRPGDLIHNAYGYGLFTGGLGAHYGAEKLGCTVV 149 (422)
T ss_pred CChHHcEEEEECCCCCCCCeEeccCHHHHHHHHHHHHHHHHH--cCCCCCcEEEEccCccccchhHHHHHHHHHcCcEEE
Confidence 345678899999999999999999999987654433222111 2567889998876655433332 3455677899988
Q ss_pred EeCC-CHHHHHHHHHhhCCeEEEeCcHHHHHHHHHHHHhhhcCChhhHHHHHHHHHhhhhccccCCCCCCccchhhHHHH
Q 014951 203 FWRG-DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVF 281 (415)
Q Consensus 203 ~~~~-~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (415)
..+. ++..+++.|++++||++.++|+++..+++.+........
T Consensus 150 ~~~~~~~~~~~~~i~~~~~t~l~~~Ps~l~~L~~~~~~~~~~~~------------------------------------ 193 (422)
T TIGR02155 150 PISGGQTEKQVQLIQDFKPDIIMVTPSYMLNLLEELKRMGIDPA------------------------------------ 193 (422)
T ss_pred ecCCCCHHHHHHHHHHHCCCEEEEcHHHHHHHHHHHHHcCCCcc------------------------------------
Confidence 7765 789999999999999999999999988764332100000
Q ss_pred HHHHHHhCCceeEEEEecCCCCHHHHHHHHHhcCCceEEeeccCCCCc-eeeeecCCcccccCcccccc--cCeEEEEee
Q 014951 282 SKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQGYGLTESCS-GCFTSLADVFNMIGTVGVPM--TTVEARLES 358 (415)
Q Consensus 282 ~~~~~~~~~~lr~v~~~G~~~~~~~~~~~~~~~~~~~~~~yG~tE~~~-~~~~~~~~~~~~~~~~G~~~--~g~~~~i~~ 358 (415)
..++|.++++||++++++.+.+++.|++++++.||+||+++ .+...... ...|.++ +++.++|+|
T Consensus 194 -------~~~lr~i~~~ge~l~~~~~~~i~~~~g~~v~~~YG~tE~~~~~~~~~~~~-----~~~g~~~~~~~~~~eivd 261 (422)
T TIGR02155 194 -------QTSLQVGIFGAEPWTNAMRKEIEARLGMKATDIYGLSEVIGPGVAMECVE-----TQDGLHIWEDHFYPEIID 261 (422)
T ss_pred -------cCceEEEEEeCCcCCHHHHHHHHHHhCCceEecccchhhcCCceeecccc-----cCCCceEecCeeEEEEEC
Confidence 02799999999999999999999999999999999999853 22221111 1123343 356778888
Q ss_pred cCCCCCCCCCCCCCCeEEEecCCccccccCCchhhhhhhcCCceecCceEEEcCC
Q 014951 359 VPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVIVDGWFHTGDIGEWQPM 413 (415)
Q Consensus 359 ~~~~~~~~~~~~~~Gel~v~~~~~~~gY~~~~~~~~~~~~~g~~~TGDlg~~d~~ 413 (415)
++++ .++++|+.|||++++. +..+|..+||+|||+++++++
T Consensus 262 -~~~g-~~v~~Ge~Gelvvt~~------------~~~~~p~~ry~TGDl~~~~~~ 302 (422)
T TIGR02155 262 -PHTG-EVLPDGEEGELVFTTL------------TKEALPVIRYRTRDLTRLLPG 302 (422)
T ss_pred -CCCC-CCCCCCCeeEEEEecC------------CccccceeeEEcCcEEEEECC
Confidence 4332 4456789999999863 344556789999999999875
No 123
>TIGR02372 4_coum_CoA_lig 4-coumarate--CoA ligase, photoactive yellow protein activation family. Ectothiorhodospira halophila. This enzyme is designated 6.2.1.12 and therefore joins a number of plant enzymes linked to lignin biosynthesis and given similar names.
Probab=99.91 E-value=1.2e-23 Score=195.02 Aligned_cols=191 Identities=16% Similarity=0.167 Sum_probs=143.1
Q ss_pred CCeEEEEecCCCCCCCceEEeecHHHHHHhhhhhhhhhhccccC--CCCCEEEEeCChhhHHHHHH-HHHhhhcCcEEEE
Q 014951 127 TNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVC--SEEDTYFSFLPLAHIYDQII-ETHCIHKGCSIGF 203 (415)
Q Consensus 127 ~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~~~~~~~~~~~~~~--~~~d~~l~~~p~~~~~~~~~-~~~~l~~G~~vv~ 203 (415)
++.++++|||||||.||+|.+||+++...+..+...+ .+ ...+++++.+|++|.+++.. ++.++..|+++++
T Consensus 95 ~~~~~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~-----~~~~~~~dr~l~~~Pl~h~~g~~~~~l~~l~~G~~vv~ 169 (386)
T TIGR02372 95 PTARFTFATSGSTGTPKPVTHSWAALLSEAQAIAKIL-----GERPPPVRRVISCVPAHHLYGFLFSCLLPSRRGLEAKQ 169 (386)
T ss_pred CCceEEEECCCCCCCCceeEeeHHHHHHHHHHHHHHh-----CcCCCCCCeEEEeCCcHHHHHHHHHHHHHHHCCCeEEe
Confidence 5578999999999999999999999998887766554 33 34468999999999988764 6778889999988
Q ss_pred eCC-CHHHHHHHHHhhCCeEEEeCcHHHHHHHHHHHHhhhcCChhhHHHHHHHHHhhhhccccCCCCCCccchhhHHHHH
Q 014951 204 WRG-DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFS 282 (415)
Q Consensus 204 ~~~-~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (415)
.+. ++..+++.++.+ |++.++|++++.+.+.. .++
T Consensus 170 ~~~~~~~~~l~~i~~~--t~~~~~P~~l~~l~~~~-----------------------------------------~~l- 205 (386)
T TIGR02372 170 LAAAPASGIMRHARPG--DLIVGTPFIWEQLADLD-----------------------------------------YRL- 205 (386)
T ss_pred cCCCChHHHHHhhccC--CEEEECcHHHHHHHhhC-----------------------------------------cCC-
Confidence 765 788888887654 89999999998875410 000
Q ss_pred HHHHHhCCceeEEEEecCCCCHHHHHHHHHhcCC-ceEEeeccCCCCceeeeecCCcccccCcccccccCeEEEEeecCC
Q 014951 283 KIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGA-PLTQGYGLTESCSGCFTSLADVFNMIGTVGVPMTTVEARLESVPE 361 (415)
Q Consensus 283 ~~~~~~~~~lr~v~~~G~~~~~~~~~~~~~~~~~-~~~~~yG~tE~~~~~~~~~~~~~~~~~~~G~~~~g~~~~i~~~~~ 361 (415)
++++. ++||+++++++.+.+++. +. .+++.||+||++++..... ++..|+++|++++++ + +
T Consensus 206 -------~slr~-i~gGa~l~~~l~~~~~~~-g~~~v~~~YG~TEt~~i~~~~~------~~~~~~~~p~~~~~~-~--~ 267 (386)
T TIGR02372 206 -------PGVVG-VSSGAPSTAATWRCLLAA-GLARLLEVYGATETGGIGLREA------PDDPFRLLPDLACFA-D--T 267 (386)
T ss_pred -------Cccee-EecCCCCCHHHHHHHHHh-cccchhheeccccccccccccC------CCCCcccCCCccccC-C--C
Confidence 25665 678999999999999875 54 7999999999987544321 134577888876643 1 1
Q ss_pred CCCCCCCCCCCCeEEEecCCccccccCCchhhhhhhcCCceecCceEEEcCCCC
Q 014951 362 MGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVIVDGWFHTGDIGEWQPMEL 415 (415)
Q Consensus 362 ~~~~~~~~~~~Gel~v~~~~~~~gY~~~~~~~~~~~~~g~~~TGDlg~~d~~G~ 415 (415)
+. + .|+ ..|++|||+|++|++|+
T Consensus 268 ~~----------~---~g~------------------~~~~~tgD~g~~d~~G~ 290 (386)
T TIGR02372 268 LS----------S---AGL------------------ARRLDLQDRLAWDKDGG 290 (386)
T ss_pred cc----------C---CCc------------------cceeecCceEEEcCCCc
Confidence 11 0 021 12689999999999985
No 124
>TIGR03335 F390_ftsA coenzyme F390 synthetase. This enzyme, characterized in Methanobacterium thermoautotrophicum and found in several other methanogens, modifies coenzyme F420 by ligation of AMP (or GMP) from ATP (or GTP). On F420, it activates an aromatic hydroxyl group, which is unusual chemistry for an adenylyltransferase. This enzyme name has been attached to numbers of uncharacterized genes likely to instead act as phenylacetate CoA ligase, based on proximity to predicted indolepyruvate ferredoxin oxidoreductase (1.2.7.8) genes. The enzyme acts during transient exposure of the organism to oxygen.
Probab=99.89 E-value=1.1e-21 Score=186.49 Aligned_cols=223 Identities=17% Similarity=0.091 Sum_probs=157.6
Q ss_pred CCCCCeEEEEecCCCCCCCceEEeecHHHHHHhhhhhhhhhhccccCCCCCEEEEeCChhhHHHHHH-HHHhhhcCcEEE
Q 014951 124 KKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQII-ETHCIHKGCSIG 202 (415)
Q Consensus 124 ~~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~-~~~~l~~G~~vv 202 (415)
...++++.+.+||||||.||+|.+||.++..........+.. ..+.++|+++...|..+..+... .+.++..|++++
T Consensus 83 ~~~~~i~~i~~TSGTTG~Pk~v~~T~~dl~~~~~~~~r~~~~--~G~~~gD~vl~~~~~~~~~g~~~~~~~~~~~Ga~vi 160 (445)
T TIGR03335 83 ADWKDIYTIHETSGTSGTPKSFFLTWDDWKRYAEKYARSFVS--QGFTAGDRMVICASYGMNVGANTMTLAAREVGMSII 160 (445)
T ss_pred CCHHHeEEEEeCCCCCCCcceeeecHHHHHHHHHHHHHHHHH--cCCCCCCeEEEEecCCcchhHHHHHHHHHHcCCEEE
Confidence 346788899999999999999999999988766554433211 25678899999998887665543 455677888775
Q ss_pred EeCCCHHHHHHHHHhhCCeEEEeCcHHHHHHHHHHHHhhhcCChhhHHHHHHHHHhhhhccccCCCCCCccchhhHHHHH
Q 014951 203 FWRGDVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFS 282 (415)
Q Consensus 203 ~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (415)
... .....++.|+.+++|.+.++|+.+..+.+.+.......
T Consensus 161 ~~~-~~~~~~~~i~~~~~t~l~~~ps~ll~La~~~~~~g~~~-------------------------------------- 201 (445)
T TIGR03335 161 PEG-KCTFPIRIIESYRPTGIVASVFKLLRLARRMKAEGIDP-------------------------------------- 201 (445)
T ss_pred cCC-chhHHHHHHHHhCCCEEEECHHHHHHHHHHHHHcCCCc--------------------------------------
Confidence 433 44567899999999999999998877765432210000
Q ss_pred HHHHHhCCceeEEEEecCCCCHHHHHHHHHhcCCceEEeeccCCCCceeeeecCCcccccCcccccc--cCeEEEEeecC
Q 014951 283 KIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQGYGLTESCSGCFTSLADVFNMIGTVGVPM--TTVEARLESVP 360 (415)
Q Consensus 283 ~~~~~~~~~lr~v~~~G~~~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~G~~~--~g~~~~i~~~~ 360 (415)
...++|.+++|||++++++.+++++.+++++++.||+||++....+. ...|..+ +.+.++|+| +
T Consensus 202 -----~~~~lr~ii~gGE~l~~~~r~~ie~~~g~~v~~~YG~TE~~~~~~c~--------~~~g~h~~~d~~~vEIvD-p 267 (445)
T TIGR03335 202 -----AESSIRRLVVGGESFADESRNYVEELWGCEVYNTYGSTEGTMCGECQ--------AVAGLHVPEDLVHLDVYD-P 267 (445)
T ss_pred -----ccCcceEEEEcCCCCCHHHHHHHHHHhCCcEEecCChhhhhheEEec--------CCCCccccCCceEEEEEc-C
Confidence 00379999999999999999999999999999999999986332221 1124444 457889999 6
Q ss_pred CCCCCCCCCCCCCeEEEecCCccccccCCchhhhhhhcCCceecCceEEE
Q 014951 361 EMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVIVDGWFHTGDIGEW 410 (415)
Q Consensus 361 ~~~~~~~~~~~~Gel~v~~~~~~~gY~~~~~~~~~~~~~g~~~TGDlg~~ 410 (415)
+++ .++++|+.|||++++-.... +...+.=--|+|||++++
T Consensus 268 ~~~-~~vp~Ge~GELvvT~L~~~~--------~r~~~PliRYrtgD~~~~ 308 (445)
T TIGR03335 268 RHQ-RFLPDGECGRIVLTTLLKPG--------ERCGSLLINYDTEDTTVV 308 (445)
T ss_pred CCC-CCCcCCCceEEEEEecCCCC--------ccCCceEEEeecCceEEE
Confidence 554 45578899999998632100 000111114899999987
No 125
>KOG3628 consensus Predicted AMP-binding protein [General function prediction only]
Probab=99.86 E-value=3.9e-20 Score=178.77 Aligned_cols=352 Identities=12% Similarity=0.103 Sum_probs=227.0
Q ss_pred CCCCCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCCCCC------HHHHHHHHHhcCceEEEEcCCChhhhhh--cCc
Q 014951 4 RGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLG------ANAVEFIINHAEVSIAFVQENKIPSILS--CLP 75 (415)
Q Consensus 4 ~Gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~------~~~l~~~l~~~~~~~ii~~~~~~~~~~~--~~~ 75 (415)
.-+++||.|++++++++|++++++||+.+|++++|+.|... -..+..+++.+++++|+++.+....+.. +..
T Consensus 822 ~~lk~Gd~V~Lmy~~sie~vaa~~~Cly~GliPIpv~p~~~s~l~~~l~~~~~ii~~~kv~ailv~~~v~~lLrsr~~s~ 901 (1363)
T KOG3628|consen 822 GHLKAGDHVVLMYPPSIEFVAAIYACLYLGLIPIPVPPPHASNLIEDLPTFRMIIKVYKVAAILVDQKVLKLLRSREASA 901 (1363)
T ss_pred ccCCCCCeEEEEcCChHHHHHHHHHHHhcCeeeeccCCccHHhhhhhhHHHHHHHHHhhhheEEecHHHHHHHhhhhHHH
Confidence 35899999999999999999999999999999999987533 3468889999999999999875544332 111
Q ss_pred cC-CCCccEEEEecCCCchhhHHhhhcCceeecHHHHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEeecHHHHH
Q 014951 76 RC-CLYLKTIVSFANVSSSQKKEAEELGVSCFSWEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVA 154 (415)
Q Consensus 76 ~~-~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~th~~l~~ 154 (415)
.. ...+..++.+........ .....+.+. ....+......+.+|++-+.--++|..-++.++|..+++
T Consensus 902 ~~~~s~~p~i~~~~~~~~t~~----------k~~~~~~k~-~~~~~~g~~~k~~~a~v~~~~~~dg~l~~~~msHsslla 970 (1363)
T KOG3628|consen 902 HVDQSAIPLILVLPKLPETIR----------KRKKNIKKL-NTPTPPGLNNKETPALVWFNVSTDGMLIGVKMSHSSLLA 970 (1363)
T ss_pred Hhhhhcchhhhcccccchhhh----------hhhhhhhcc-CCCCCccccCCCceEEEEEEecCCcceeeeeccHHHHHH
Confidence 00 022233333333221100 001111111 111112233567899999988899999999999999999
Q ss_pred HhhhhhhhhhhccccCCCCCEEEEeCChhhHHHHH-HHHHhhhcCcEEEEeCC-----CHHHHHHHHHhhCCeEEEeCcH
Q 014951 155 EVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQI-IETHCIHKGCSIGFWRG-----DVRYLMEDIQELKPTMFSGVPR 228 (415)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~-~~~~~l~~G~~vv~~~~-----~~~~~~~~i~~~~~t~~~~~P~ 228 (415)
.+...+..+ .+.+..-++...+.+-+.|+. +++..+|.|.+.++++. ++..++..|+++++.-++.+-.
T Consensus 971 ~Ck~iKe~~-----~l~~~rpl~~~~~~~sGlgf~~wcLlgVysGh~T~Li~p~~l~nnpsLll~~i~~~kvkDt~~~~~ 1045 (1363)
T KOG3628|consen 971 FCKIIKETC-----QLYKSRPLLGCSSPYSGLGFNHWCLLGVYSGHPTLLISPMDLENNPSLLLQIISQYKVKDTYPTYS 1045 (1363)
T ss_pred HHHHHHHHH-----ccccCCceEEEecCccchhHHHHHHHHHHcCCceeecCHHHhhcCHHHHHHHHhcccccccchhHH
Confidence 999998887 666666666666666666665 68999999999888765 8999999999999999999999
Q ss_pred HHHHHHHHHHHhhhcCChhhHHHHHHHHHhhhhccccCCCCCCccchhhHHHHHHHHHHhCCceeEEEEecCCCCHHHHH
Q 014951 229 VYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEE 308 (415)
Q Consensus 229 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~~G~~~~~~~~~ 308 (415)
.++.+.+++..+........ ... +-..++..-+.....+.+
T Consensus 1046 tln~c~~~l~t~~enl~~~g-------------------------------------nn~--s~s~vv~~~~RPr~ali~ 1086 (1363)
T KOG3628|consen 1046 TLNLCQKGLETSVENLSKRG-------------------------------------NNT--SSSIVVPAEERPRIALIA 1086 (1363)
T ss_pred HHHHHHhccccccchhhhhh-------------------------------------ccc--ccceeeecCCccHHHHHH
Confidence 99888775544332221100 000 012333344444444444
Q ss_pred HHHHhc---C---CceEEee-------------ccCCCCceee-eec--------CCcc----cccCcccccccCeEEEE
Q 014951 309 FLRVTS---G---APLTQGY-------------GLTESCSGCF-TSL--------ADVF----NMIGTVGVPMTTVEARL 356 (415)
Q Consensus 309 ~~~~~~---~---~~~~~~y-------------G~tE~~~~~~-~~~--------~~~~----~~~~~~G~~~~g~~~~i 356 (415)
-|.+.+ + ..+-..| ...|-+.... ... .+.. -..-..|...+++++.|
T Consensus 1087 sf~klfa~igLsp~avStsys~r~Np~Ic~r~~sg~~Pt~~y~D~raLR~grV~~ve~~ap~~l~L~dSG~~~~~~~i~I 1166 (1363)
T KOG3628|consen 1087 SFKKLFAAIGLSPRAVSTSYSSRVNPFICLRSYSGPEPTTVYLDARALREGRVRLVEVGAPHSLLLYDSGKLPVYTDIAI 1166 (1363)
T ss_pred HHHHHHHHcCCChhhhcccccccCChHhhhccccCCCCcceeechhhhhccceeeeecCCCCccccccCCcccccceeEE
Confidence 444433 1 1122222 2222221110 000 0000 00122488889999999
Q ss_pred eecCCCCCCCCCCCCCCeEEEecCCccccccCCch-hhhhhhc----------CCceecCceEEEcC
Q 014951 357 ESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPD-LTEEVIV----------DGWFHTGDIGEWQP 412 (415)
Q Consensus 357 ~~~~~~~~~~~~~~~~Gel~v~~~~~~~gY~~~~~-~~~~~~~----------~g~~~TGDlg~~d~ 412 (415)
++ +|.. .+|.+|+.||||++|.+-+.+|+.-.+ .....|. .+|-||||+|++..
T Consensus 1167 vn-PEtk-~pc~dge~GEIW~~S~hnA~~~~~~~d~~~~~~fn~rl~~g~~~~~sy~RTG~LGFl~~ 1231 (1363)
T KOG3628|consen 1167 VN-PETK-GPCRDGELGEIWVNSAHNASCSFTIGDELRSNHFNARLSSGDLLGKSYARTGDLGFLRR 1231 (1363)
T ss_pred eC-Cccc-cccccCCcceEEeccccccccccccCchhhhhhhhhhccccccccccceeeeeeeeeee
Confidence 99 6665 788899999999999999888875322 2222231 34999999999753
No 126
>TIGR03089 conserved hypothetical protein TIGR03089. This protein family is found, so far, only in the Actinobacteria (Streptomyces, Mycobacterium, Corynebacterium, Nocardia, Propionibacterium, etc.) and never more than one to a genome. Members show twilight-level sequence similarity to family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=99.86 E-value=9.4e-21 Score=162.86 Aligned_cols=180 Identities=13% Similarity=0.082 Sum_probs=128.6
Q ss_pred Ccc-CCCCCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEcCCChhhhhhcCccCCC
Q 014951 1 MRS-RGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCL 79 (415)
Q Consensus 1 L~~-~Gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~ 79 (415)
|++ .|+++||+|+|+++|+++++++++||+++|++++|++ .++++++|++++..+.+.. .
T Consensus 44 L~~~~Gv~~GdrV~i~~~n~~~~~~~~~a~~~~G~v~vp~n-------------~s~a~~~v~~~~~~~~~~~------~ 104 (227)
T TIGR03089 44 LQDELDAEPGSRVALDLPAHWQTAVWLLAAWSTGVEVVLAG-------------DPDADVVVTGPDRLAAAAG------S 104 (227)
T ss_pred HHHHhCCCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEeCC-------------CCCCCEEEeCcchhhhccc------C
Confidence 345 6999999999999999999999999999999999995 7899999999887666421 1
Q ss_pred CccEEEEecCCCchhhHHhhhcCceeecHHHHHhcCCCCCCCC-CCCCCCeEEEEecCCCCCCCceEEeecHHHHHHhhh
Q 014951 80 YLKTIVSFANVSSSQKKEAEELGVSCFSWEEFLQLGTLDCELP-PKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLS 158 (415)
Q Consensus 80 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~~ 158 (415)
+.++.+......... .......+.++.+............ ...++|++.++||||+ +|++++.+.
T Consensus 105 --~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~a~l~yTsg~---------~~~~~~~~~-- 170 (227)
T TIGR03089 105 --GEVVALSLDPLGRRV-AGELPPGVIDFAPEVRVHGDQFAPYEPPDATAPALVAGGGEW---------TGAELVAAA-- 170 (227)
T ss_pred --CceEEEeccccccCC-CCCCCCcccchhhhhhccCCCCCCCCCCCCCcceeeeccccc---------cHHHHHHHH--
Confidence 223332110000000 0000112235555554322222212 4567999999999985 666666554
Q ss_pred hhhhhhhccccCCCCCEEEEeCChhhHHHHHH-HHHhhhcCcEEEEeCC-CHHHHHHHHHhhCCe
Q 014951 159 VDQMFVVTGKVCSEEDTYFSFLPLAHIYDQII-ETHCIHKGCSIGFWRG-DVRYLMEDIQELKPT 221 (415)
Q Consensus 159 ~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~-~~~~l~~G~~vv~~~~-~~~~~~~~i~~~~~t 221 (415)
..+ .+.++|+++ .+|++|.+|+.. ++.+++.|+++++.+. ++..+++.|++++||
T Consensus 171 --~~~-----~l~~~D~~l-~~Pl~H~~gl~~~~~~~l~~G~t~v~~~rFd~~~~l~~i~~~~vT 227 (227)
T TIGR03089 171 --RAA-----GLPPGDRVL-VLAWTDLEDFLATLLAPLAAGGSLVLVTHPDPARLDQIAETERVT 227 (227)
T ss_pred --hhc-----CCCCCCeEE-ecCCCchHHHHHHHHHHhccCceEEEecCCCHHHHHHHHHhhcCC
Confidence 222 678899999 999999999975 7889999999988865 999999999999987
No 127
>COG1541 PaaK Coenzyme F390 synthetase [Coenzyme metabolism]
Probab=99.77 E-value=4.3e-17 Score=147.95 Aligned_cols=223 Identities=20% Similarity=0.184 Sum_probs=164.0
Q ss_pred CCCCCeEEEEecCCCCCCCceEEeecHHHHHHhhhhhhhhhhccccCCCCCEEEEeCChh-hHHHHHHHHHhhhcCcEEE
Q 014951 124 KKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLA-HIYDQIIETHCIHKGCSIG 202 (415)
Q Consensus 124 ~~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~-~~~~~~~~~~~l~~G~~vv 202 (415)
...++...|--||||||+|+.+.+++..+......+.+.+.. .....+|++....... +..++...+++--.|++++
T Consensus 87 ~~~~~i~~ihaSSGTTGkPt~~~~t~~D~~~wa~~~aR~~~~--~g~~~gd~v~~~~~yGl~tgg~~~~~ga~rig~~vi 164 (438)
T COG1541 87 VPKEEIVRIHASSGTTGKPTVFGYTAKDIERWAELLARSLYS--AGVRKGDKVQNAYGYGLFTGGLGLHYGAERIGATVI 164 (438)
T ss_pred ccccceEEEEccCCCCCCceeeecCHHHHHHHHHHHHHHHHH--ccCCCCCEEEEEeeeccccCCchhHHHHHhhCEEEE
Confidence 345666779999999999999999999988888777665532 3667888887665532 2233344555556788877
Q ss_pred EeCC-CHHHHHHHHHhhCCeEEEeCcHHHHHHHHHHHHhhhcCChhhHHHHHHHHHhhhhccccCCCCCCccchhhHHHH
Q 014951 203 FWRG-DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVF 281 (415)
Q Consensus 203 ~~~~-~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (415)
-... +.+..+++++.+++|++.++|+.+..+++.+........
T Consensus 165 p~~~g~~~~~~~l~~df~~tvI~~tps~~l~lae~~~~~G~~~~------------------------------------ 208 (438)
T COG1541 165 PISGGNTERQLELMKDFKPTVIAATPSYLLYLAEEAEEEGIDPD------------------------------------ 208 (438)
T ss_pred ccCCccHHHHHHHHHhcCCcEEEEChHHHHHHHHHHHHcCCChh------------------------------------
Confidence 7665 899999999999999999999999999886665420000
Q ss_pred HHHHHHhCCceeEEEEecCCCCHHHHHHHHHhcCCceEEeeccCCCCcee--eeecCCcccccCccccc--ccCeEEEEe
Q 014951 282 SKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQGYGLTESCSGC--FTSLADVFNMIGTVGVP--MTTVEARLE 357 (415)
Q Consensus 282 ~~~~~~~~~~lr~v~~~G~~~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~--~~~~~~~~~~~~~~G~~--~~g~~~~i~ 357 (415)
+ .++|.+++|+|+++++..+.+.+.||+..++.||.||..+.. .|.. .. |.+ -+...+.|+
T Consensus 209 -~------~~lk~~i~gaE~~see~R~~ie~~~g~~~~diYGltE~~g~g~~eC~~-------~~-glhi~eD~~~~Ei~ 273 (438)
T COG1541 209 -K------LSLKKGIFGAEPWSEEMRKVIENRFGCKAFDIYGLTEGFGPGAGECTE-------RN-GLHIWEDHFIFEIV 273 (438)
T ss_pred -h------cceeEEEEecccCCHHHHHHHHHHhCCceeeccccccccCCccccccc-------cc-CCCcchhhceeeee
Confidence 0 389999999999999999999999999999999999986652 1211 11 333 356777888
Q ss_pred ecCCCCCCCCCCCCCCeEEEecCCccccccCCchhhhhhhcCCceecCceEEEcCC
Q 014951 358 SVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVIVDGWFHTGDIGEWQPM 413 (415)
Q Consensus 358 ~~~~~~~~~~~~~~~Gel~v~~~~~~~gY~~~~~~~~~~~~~g~~~TGDlg~~d~~ 413 (415)
| ++.+ ..+++|+.|||.++. +++..+.---|+|||++++.++
T Consensus 274 d-P~t~-e~l~dge~GelV~T~------------L~~~~~PlIRYrtgDit~i~~~ 315 (438)
T COG1541 274 D-PETG-EQLPDGERGELVITT------------LTKEGMPLIRYRTGDITVILSD 315 (438)
T ss_pred c-CCcC-ccCCCCCeeEEEEEe------------ccccCcceEEEEcCCeeEeccc
Confidence 8 5444 566677999999975 2222222225999999999873
No 128
>KOG1178 consensus Non-ribosomal peptide synthetase/alpha-aminoadipate reductase and related enzymes [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.61 E-value=8.5e-15 Score=146.11 Aligned_cols=271 Identities=15% Similarity=0.096 Sum_probs=161.7
Q ss_pred ccCCCCCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCCCCC----HHHHHHH---HHhcCceEEEEcCCChhhhhhcC
Q 014951 2 RSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLG----ANAVEFI---INHAEVSIAFVQENKIPSILSCL 74 (415)
Q Consensus 2 ~~~Gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~----~~~l~~~---l~~~~~~~ii~~~~~~~~~~~~~ 74 (415)
...|..+|+.|++++..+.++++..++.++.|..+++++|+++ ++++..+ +......++. .. + +....
T Consensus 87 ~~~~~~~~~~v~i~~~~~~d~~v~v~~~~~~g~~~~~idp~~~~~e~~~~~~~ia~~~~s~~~~i~~--~l--~-i~~~~ 161 (1032)
T KOG1178|consen 87 VSLGSLRGTTVAIYMLPSVDLVVSVFAVLAAGLTFLPIDPSWPNSELAGYLMRIAHFLTSVELEIVR--RL--N-IIDIL 161 (1032)
T ss_pred hhcccccCceEEEeccCcCCeeeeeeehhhcceEEEEecCCCcccccchHHHhhhhhheeccceehh--hh--h-hHHHH
Confidence 3567789999999999999999999999999999999999999 3322111 1111111100 00 0 00000
Q ss_pred ccCCCCccEEEEecCCCchhhHHhhhcCce-eecHHHHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEeecHHHH
Q 014951 75 PRCCLYLKTIVSFANVSSSQKKEAEELGVS-CFSWEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIV 153 (415)
Q Consensus 75 ~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~th~~l~ 153 (415)
.. +-.. ..... ..+.-..+........-...-++..+.+.||||+||.||+|..+|..+.
T Consensus 162 ~~-----------~~~~--------~~sv~~~~~~f~~~~~~~~~r~~~~~~~ds~~~l~~tSgs~G~pk~v~~~~~sl~ 222 (1032)
T KOG1178|consen 162 LN-----------SLFP--------KLSVETIADSFQMVLHNEDTREIRVGGNDSTALLSFTSGSTGVPKGVAGTHFSLA 222 (1032)
T ss_pred hh-----------cccc--------ccchhhccchhhhhhccCCCcceeeecccccceEeecccccccccccchhHHHHH
Confidence 00 0000 00000 0000011111111222233456778999999999999999999999999
Q ss_pred HHhhhhhhhhhhccccCCCCCEEEEeCCh-hhHHHHHHHHHhhhcCcEEEEeCC----CHHHHHHHHHhhCCeEEEeCcH
Q 014951 154 AEVLSVDQMFVVTGKVCSEEDTYFSFLPL-AHIYDQIIETHCIHKGCSIGFWRG----DVRYLMEDIQELKPTMFSGVPR 228 (415)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~d~~l~~~p~-~~~~~~~~~~~~l~~G~~vv~~~~----~~~~~~~~i~~~~~t~~~~~P~ 228 (415)
....+....+ .....+.+-..... ++..-.......+..|+.+..+.. ++.++...+++++++.++.+|+
T Consensus 223 ~~fdw~~~~f-----~~t~s~~~~~~~~~~~~d~i~~~~~~~L~~~~~l~~p~~~~~~~~~~l~~~le~y~i~~~~~~~a 297 (1032)
T KOG1178|consen 223 NAFDWMFTTF-----PPTGSDRFTFKTSVYFDDTIQKFIGALLFNGNNLLVPTATIKDTPGQLASTLERYGITVSHLLPA 297 (1032)
T ss_pred hhhhhccccC-----CcCccchhhhhheeecccchHHHHhhHhhcCceeecccccCccchhhHHHHHHhhhheeeeechh
Confidence 9999987776 56666665222223 222222334455666776666533 5899999999999999999999
Q ss_pred HHHHHHHHHHHhhhcCChhhHHHHHHHHHhhhhccccCCCCCCccchhhHHHHHHHHHHhCCceeEEEEecCCCCHHHHH
Q 014951 229 VYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEE 308 (415)
Q Consensus 229 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~~G~~~~~~~~~ 308 (415)
++++++.+...-...... ...++ ++.... +.|+....+|+|....+..
T Consensus 298 ~~~~l~~~~~~~~~~l~~-------------~~~~~------------------dl~~~~-~~Lkl~~~~~ep~~v~l~~ 345 (1032)
T KOG1178|consen 298 MCQLLLAILTTSLPLLEH-------------AFSLS------------------DLLTKR-SCLKLVVLGGEPLLVSLYT 345 (1032)
T ss_pred hhhhhhhhcCcchhhhhh-------------hhhcc------------------cccccc-hhheeeeecCCccchhhhh
Confidence 998887643321000000 00000 000000 3789999999999999888
Q ss_pred HHHHhcC-CceEEeeccCCCCceeee
Q 014951 309 FLRVTSG-APLTQGYGLTESCSGCFT 333 (415)
Q Consensus 309 ~~~~~~~-~~~~~~yG~tE~~~~~~~ 333 (415)
.+...+. .-...-|++++....+..
T Consensus 346 s~~~~~~~~~~~~~y~s~~~~~~~s~ 371 (1032)
T KOG1178|consen 346 STFDLLAEIFFGLPYLSTDPTGLVSY 371 (1032)
T ss_pred hhhhcccceeeeecccCCCCccceeH
Confidence 4443332 223333888888776543
No 129
>KOG3628 consensus Predicted AMP-binding protein [General function prediction only]
Probab=99.51 E-value=1.1e-13 Score=134.98 Aligned_cols=355 Identities=16% Similarity=0.138 Sum_probs=224.8
Q ss_pred ccCCCCCCCeEEEEcCCc--HhHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEcCCChhhhhhcCccCCC
Q 014951 2 RSRGVNPGDRCGIYGSNC--PEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCL 79 (415)
Q Consensus 2 ~~~Gv~~gd~V~l~~~n~--~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~ 79 (415)
.+.|+.++|+|.++...+ .|+++..++|...|.+++|+.+..+.+++...++....+++++.......+.+.....
T Consensus 143 ~ksgl~~~~~vvL~Y~~~e~ie~~isl~gc~l~g~~~vp~~e~~s~~el~~i~~~~~~~~~l~t~a~~r~~~~~~~~~-- 220 (1363)
T KOG3628|consen 143 NKSGLKPGDRVVLYYRKCEAIEFLISLFGCFLLGIVAVPLSELSSSEELKDIVNPTPERVALTTEAGERAFINDNSPV-- 220 (1363)
T ss_pred hccCCCCCcEEEEEEEhhhhhHHhhhhccccccceeeccchhhhhhhhhhcccCCCccceEeehhhhHHHhhhccCcc--
Confidence 456999999999999986 8999999999999999999999999999999999999999998876554433221100
Q ss_pred CccEEEEecCCCchhhHHhhhcCceeecHHHHHhcCC-CCCCCCCCCCCCeEEEEecCCCCCCCceEEeecHHHHHHhhh
Q 014951 80 YLKTIVSFANVSSSQKKEAEELGVSCFSWEEFLQLGT-LDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLS 158 (415)
Q Consensus 80 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~~ 158 (415)
+. .....++.+.++-.... .....++..-. ..+|-||++++|.--|++++|. ++.+.+.
T Consensus 221 s~------------------~k~v~~w~t~~~k~~~~~~k~~~P~~~~~-~~~i~~t~s~l~~~~g~V~~~~-~~~q~r~ 280 (1363)
T KOG3628|consen 221 SL------------------AKAVAWWKTNDFKGNYTKDKIKKPRMQLP-YGYIEFTRSPLGNLIGVVYKHK-FLPQMRV 280 (1363)
T ss_pred cH------------------HHHHHhhhcccccceeehhhccCCceeee-eEEEEEeccchhceeeeEeecc-cccchhh
Confidence 00 00000111111110000 11111222223 8899999999999999999998 5554443
Q ss_pred hhhhhh---------------hccccCCCCCEEEEeCChhhHHHHHH-HHHhhhcCcEEEEeCC----CHHHHHHHHHhh
Q 014951 159 VDQMFV---------------VTGKVCSEEDTYFSFLPLAHIYDQII-ETHCIHKGCSIGFWRG----DVRYLMEDIQEL 218 (415)
Q Consensus 159 ~~~~~~---------------~~~~~~~~~d~~l~~~p~~~~~~~~~-~~~~l~~G~~vv~~~~----~~~~~~~~i~~~ 218 (415)
+..... ..-...+.++.++.........|++. ++.+++.|.+.+.++. .|..+.+++.++
T Consensus 281 ~~~~~nt~Pa~~~~~~~~~~~~~v~~~~~~~~~l~~~~~s~~lGlilGV~~alfsg~c~i~~p~~~l~~pG~~~~l~~k~ 360 (1363)
T KOG3628|consen 281 LTSIPNTNPARFAAAFYGCLHAHVFPVPSEDVLLTNLDPSQQLGLILGVLVALFSGYCTIGCPKEVLKPPGLIANLITKY 360 (1363)
T ss_pred hhhccCcChHHHHHhhhcchhhhccccCcccceeeccCcccccchhhhhhhhhhcCceeecCchhhcCCCcchhhhhccc
Confidence 321110 01113456777777777777777775 7889999999988875 788999999999
Q ss_pred CCeEEEeCcHHHHHHHHHHHHhhhcCChhhHHHHHHHHHhhhhccccCCCCCCccchhhHHHHHHHHHHhCCceeEEEEe
Q 014951 219 KPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSG 298 (415)
Q Consensus 219 ~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~~ 298 (415)
+++++..--..+.+....+.. .....+.+.+=+..-.+++|.+++.
T Consensus 361 R~~~~ltd~~~Lkq~~~ny~~----------------------------------~p~a~~s~~k~~t~d~sslk~C~Vt 406 (1363)
T KOG3628|consen 361 RATWSLTDYAGLKQPVYNYQE----------------------------------DPKATLSFKKYKTPDLSSLKGCMVT 406 (1363)
T ss_pred eeEEEeecccccCcccccccC----------------------------------CcccccchhhccCCCccceeeeEEe
Confidence 999988766555443221110 0111111111111222689999999
Q ss_pred cCCCCHHHHHHHHHhc----CC-ceEE-----------------eeccCCCCceeeeecCCcc-----------------
Q 014951 299 AAPLPIHVEEFLRVTS----GA-PLTQ-----------------GYGLTESCSGCFTSLADVF----------------- 339 (415)
Q Consensus 299 G~~~~~~~~~~~~~~~----~~-~~~~-----------------~yG~tE~~~~~~~~~~~~~----------------- 339 (415)
-..+..+..+.....+ |. .+.. .-+++|.+...-..+....
T Consensus 407 c~~vd~~~~~ivs~~wlk~lg~~~~~~~~~p~l~ll~hGgi~is~k~~~~~~~~~~r~p~~~~~~~~~e~ll~~~~L~~~ 486 (1363)
T KOG3628|consen 407 CTAVDTEFQEIVSDRWLKPLGETNVKVVDFPILCLLWHGGIPISFKDWMEIGTVSIRRPEQMADTLPGEGLLSKEALKLN 486 (1363)
T ss_pred eeecchHHHHHHHHhhcccccCcCcceeechhhhhhhcCceEEEeccchhhhcccccCcccccccCccceeeeccccccc
Confidence 9999888665544443 21 1111 2223343332211111000
Q ss_pred ----------c--ccCcccccccC-eEEEEeecCCCCCCCCCCCCCCeEEEecCCccccccCCchhhhhhhc--------
Q 014951 340 ----------N--MIGTVGVPMTT-VEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVIV-------- 398 (415)
Q Consensus 340 ----------~--~~~~~G~~~~g-~~~~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gY~~~~~~~~~~~~-------- 398 (415)
. ....+|...|| +.+.|++ ++....|..+++|||||.+++...+||.-+..|...|.
T Consensus 487 ~V~v~~e~~is~~s~kd~~~i~~g~~t~~vv~--~~t~~LC~~~eVGEIwVsS~~~~~~~~al~~~t~~~F~~~~~~s~~ 564 (1363)
T KOG3628|consen 487 EVEVDTEDDISSLSVKDVLCIMPGDATLAVVN--PDTNQLCKTDEVGEIWVSSNSLGKLFYALDKQTENTFKATPVESSG 564 (1363)
T ss_pred eEEEcchhhhhhcCccccceecccceEEEEeC--CCcccccccCcceeEEEecCCcccceeeccccccceEEeeeccccC
Confidence 0 01225666665 3334444 55567788899999999999999999988777776662
Q ss_pred -----CCceecCceEEEcCCC
Q 014951 399 -----DGWFHTGDIGEWQPME 414 (415)
Q Consensus 399 -----~g~~~TGDlg~~d~~G 414 (415)
..|.|||-+|++.+++
T Consensus 565 ~~~~n~~FmRtGLlGFv~~gk 585 (1363)
T KOG3628|consen 565 KPPSNVPFMRTGLLGFVHNGK 585 (1363)
T ss_pred CCCccchhhhhcceeeeeCCe
Confidence 1399999999998765
No 130
>TIGR02304 aden_form_hyp probable adenylate-forming enzyme. Members of this family form a distinct clade within a larger family of proteins that also includes coenzyme F390 synthetase, an enzyme known in Methanobacterium thermoautotrophicum and a few other methanogenic archaea. That enzyme adenylates coenzyme F420 to F390, a reversible process, during oxygen stress. Other informative homologies include domains of the non-ribosomal peptide synthetases involved in activation by adenylation. The family defined by this model is likely to be of an adenylate-forming enzyme related to but distinct from coenzyme F390 synthetase.
Probab=99.38 E-value=6.9e-11 Score=110.46 Aligned_cols=146 Identities=15% Similarity=0.127 Sum_probs=99.3
Q ss_pred eEEEEecCCCCCCCceEEeecHHHHHHhhhhhhhhhhccccCCCCCEEEEe--CChhhHHHHHHHHHhhhc-CcEEEEeC
Q 014951 129 ISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSF--LPLAHIYDQIIETHCIHK-GCSIGFWR 205 (415)
Q Consensus 129 ~~~i~~TSGtTG~pK~v~~th~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~--~p~~~~~~~~~~~~~l~~-G~~vv~~~ 205 (415)
-..+..||||||.|-.+..+.................. .+..++++... .+. +.+.. +.. ...+.+.+
T Consensus 101 ~~~v~~TSGSSG~p~~f~~~~~~~~~~~a~~~~~~~~~--g~~~g~r~a~~~~~~~-~ly~~------~~~~~~~~~~~~ 171 (430)
T TIGR02304 101 NISVGLSSGTSGRRGLFVVSPEEQQMWAGGILAKVLPD--GLFAKHRIAFFLRADN-NLYQS------VNNRWISLDFFD 171 (430)
T ss_pred cEEEEECCCCCCCceEEEECHHHHHHHHHHHHhhhCcc--ccccCCcEEEEEccCh-hHHHH------HHhccceeeecC
Confidence 45677899999999999999887654433322221111 33344444443 221 21211 111 11122221
Q ss_pred --CCHHHHHHHHHhhCCeEEEeCcHHHHHHHHHHHHhhhcCChhhHHHHHHHHHhhhhccccCCCCCCccchhhHHHHHH
Q 014951 206 --GDVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSK 283 (415)
Q Consensus 206 --~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (415)
.+.+..++.|++++|+.+.+.|+.+..|++.+..... +
T Consensus 172 l~~~~~~~l~~L~~~~P~~L~g~pS~l~~LA~~~~~~~l----------------------------------~------ 211 (430)
T TIGR02304 172 LLAPFQAHIKRLNQRKPSIIVAPPSVLRALALEVMEGEL----------------------------------T------ 211 (430)
T ss_pred CCcCHHHHHHHHHHhCCCEEEEcHHHHHHHHHHHHhcCC----------------------------------C------
Confidence 3789999999999999999999999998875443210 0
Q ss_pred HHHHhCCceeEEEEecCCCCHHHHHHHHHhcCCceEEeeccCCCCce
Q 014951 284 IREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQGYGLTESCSG 330 (415)
Q Consensus 284 ~~~~~~~~lr~v~~~G~~~~~~~~~~~~~~~~~~~~~~yG~tE~~~~ 330 (415)
-+++.++++||+++++..+.+++.||+++++.||+|| +.+
T Consensus 212 ------~~~k~ii~~~E~l~~~~r~~Ie~~fg~~V~~~YG~tE-g~l 251 (430)
T TIGR02304 212 ------IKPKKVISVAEVLEPQDRELIRNVFKNTVHQIYQATE-GFL 251 (430)
T ss_pred ------CCceEEEEccCCCCHHHHHHHHHHhCCCeeEccCCch-hhe
Confidence 1689999999999999999999999999999999999 543
No 131
>PF04443 LuxE: Acyl-protein synthetase, LuxE; InterPro: IPR007534 LuxE is an acyl-protein synthetase found in bioluminescent bacteria. LuxE catalyses the formation of an acyl-protein thiolester from a fatty acid and a protein. This is the second step in the bioluminescent fatty acid reduction system, which converts tetradecanoic acid to the aldehyde substrate of the luciferase-catalysed bioluminescence reaction []. A conserved cysteine found at position 364 in Photobacterium phosphoreum LuxE (Q52100 from SWISSPROT) is thought to be acylated during the transfer of the acyl group from the synthetase subunit to the reductase. The C-terminal of the synthetase is though to act as a flexible arm to transfer acyl groups between the sites of activation and reduction []. A LuxE domain is also found in the Vibrio cholerae RBFN protein (Q06961 from SWISSPROT), which is involved in the biosynthesis of the O-antigen component 3-deoxy-L-glycero-tetronic acid. This entry represents the LuxE domain, which is found in archaeal and bacterial proteins.; GO: 0047474 long-chain fatty acid luciferin component ligase activity, 0008218 bioluminescence
Probab=98.60 E-value=1.5e-05 Score=73.23 Aligned_cols=223 Identities=15% Similarity=0.159 Sum_probs=124.2
Q ss_pred CCCCeEEEEecCCCCCCCceEEeecHHHHHHhhhhhhhhhhccccCCCCCEEEEeCChhhH---HHH--HHHHHhhhcCc
Q 014951 125 KKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHI---YDQ--IIETHCIHKGC 199 (415)
Q Consensus 125 ~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~---~~~--~~~~~~l~~G~ 199 (415)
.++++..++-||||||.|--+.+.+..+..+..++...+..........-.++...|-... .+. ...+..+..+.
T Consensus 87 ~~e~~~~~~tSSGTtG~~S~i~~D~~t~~~~~~~~~~~~~~~~~~~~~~~~il~l~p~~~~~~~~~~~~~~~~~~~~~~~ 166 (365)
T PF04443_consen 87 PEEEVEKVFTSSGTTGQPSRIFRDRETAERQQKSLNKIFQHFLGPSRLPMLILDLSPSPENRNSFSARYAGILGELFFGS 166 (365)
T ss_pred ChhhheeEEECCCCCCCCcEEEECHHHHHHHHHHHHHHHHhhcccccCCeEEEEecCCcccccchHHHHHHHHhhcccCc
Confidence 3566778899999999986677766666666655544432111111222334444443221 111 11222344555
Q ss_pred EEEEeCC--CHHHHHHHHH----hhCCeEEEeCcHHHHHHHHHHHHhhhcCChhhHHHHHHHHHhhhhccccCCCCCCcc
Q 014951 200 SIGFWRG--DVRYLMEDIQ----ELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAA 273 (415)
Q Consensus 200 ~vv~~~~--~~~~~~~~i~----~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (415)
...+-.. +.+.++..+. +.++..+++.|.++-.+...+........
T Consensus 167 ~~~l~~~~ld~~~~~~~L~~~~~~~~pv~l~Gftf~~~~~~~~l~~~~~~~~---------------------------- 218 (365)
T PF04443_consen 167 RFALDNDELDLEGLIEALFRAEHSGEPVLLFGFTFFIWFLLDELEERGIRFR---------------------------- 218 (365)
T ss_pred eeeecCCccCHHHHHHHHHHHHhCCCCEEEECchHHHHHHHHHHHhcCCccc----------------------------
Confidence 5333222 5666666554 45788899999877666554433211100
Q ss_pred chhhHHHHHHHHHHhCCceeEEEEecC------CCC-HHHHHHHHHhcCC----ceEEeeccCCCCceeeeecCCccccc
Q 014951 274 PLLDSLVFSKIREAFGGRLQAMLSGAA------PLP-IHVEEFLRVTSGA----PLTQGYGLTESCSGCFTSLADVFNMI 342 (415)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~lr~v~~~G~------~~~-~~~~~~~~~~~~~----~~~~~yG~tE~~~~~~~~~~~~~~~~ 342 (415)
+.+..+.+-.||- .++ ++..+.+++.+|+ .+++.|||||.....+....
T Consensus 219 --------------L~~~s~vi~~GGwK~~~~e~v~r~ef~~~l~~~~Gv~~~~~i~~~ygmtEl~s~~~~~~~------ 278 (365)
T PF04443_consen 219 --------------LPKGSIVIHGGGWKGRRKEAVSREEFYARLQEVFGVIPIENIYDMYGMTELNSQAYECGH------ 278 (365)
T ss_pred --------------CCCCCEEEeCCCCCccccCccCHHHHHHHHHHHHCCCCHHHeeeeeeccccchhheeCCC------
Confidence 0013445555553 354 4567778888887 69999999997654332211
Q ss_pred CcccccccCeEEEEeecCCCCCCCCCCCCCCeEEEecCCccccccCCchhhhhhhcCCceecCceEEEcCC
Q 014951 343 GTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVIVDGWFHTGDIGEWQPM 413 (415)
Q Consensus 343 ~~~G~~~~g~~~~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gY~~~~~~~~~~~~~g~~~TGDlg~~d~~ 413 (415)
+. .++|.- +.|.| +++ ..+++.|+.|-|.+-++... .|. +..-|.|+|.+..+
T Consensus 279 ~~--~~~p~w-V~iRD-p~t-l~~~~~Ge~Gli~vidl~~~-s~p------------~~IlTeDlGvl~~~ 331 (365)
T PF04443_consen 279 GH--FHVPPW-VIIRD-PET-LEPLPPGETGLIQVIDLANT-SYP------------GFILTEDLGVLHGD 331 (365)
T ss_pred Cc--ccCCCe-EEEEC-CCC-CcCCCCCCeeEEEEEccccc-CCC------------cEEEEcceeeecCC
Confidence 11 112221 55557 443 46788889999988765332 222 23668999877654
No 132
>PF03321 GH3: GH3 auxin-responsive promoter; InterPro: IPR004993 Transcription of the gene family, GH3, has been shown to be specifically induced by the plant hormone auxin. The auxin-responsive GH3 gene promoter is composed of multiple auxin response elements (AuxREs), and each AuxRE contributes incrementally to the strong auxin inducibility to the promoter.; PDB: 4EPL_A 4EQ4_B 4EWV_B 4EQL_B 4EPM_A.
Probab=97.01 E-value=0.0067 Score=59.22 Aligned_cols=32 Identities=25% Similarity=0.148 Sum_probs=26.0
Q ss_pred CCCCCCeEEEEecCCCCCC-CceEEeecHHHHH
Q 014951 123 PKKKTNISTIMYTSGTTGE-PKGVVLTNQAIVA 154 (415)
Q Consensus 123 ~~~~~~~~~i~~TSGtTG~-pK~v~~th~~l~~ 154 (415)
...++.+.++..||||||. +|-+++|...+..
T Consensus 76 vL~~~~~~~f~~TSGTTg~~~K~IP~T~~~l~~ 108 (528)
T PF03321_consen 76 VLTPGPPIYFALTSGTTGGKSKLIPYTKEFLKE 108 (528)
T ss_dssp CTSSS--SEEEEEEEEETTEEEEEEESHHHHHH
T ss_pred CCCCCCCCeEEeCCCCCCCCCceeeccHHHHHH
Confidence 4556778999999999999 9999999987655
No 133
>PRK09188 serine/threonine protein kinase; Provisional
Probab=95.91 E-value=0.0041 Score=57.38 Aligned_cols=20 Identities=20% Similarity=0.109 Sum_probs=17.4
Q ss_pred hhcCCceecCceEEE-cCCCC
Q 014951 396 VIVDGWFHTGDIGEW-QPMEL 415 (415)
Q Consensus 396 ~~~~g~~~TGDlg~~-d~~G~ 415 (415)
.+.+|||+|||+|++ |+||+
T Consensus 205 ~~~dgW~~TGDlg~~~d~dG~ 225 (365)
T PRK09188 205 LPSRIWLATGKKVYNFITRGL 225 (365)
T ss_pred cccCcEEeCCCEEEEEcCCCe
Confidence 347999999999998 79986
No 134
>PLN02249 indole-3-acetic acid-amido synthetase
Probab=95.85 E-value=0.072 Score=52.50 Aligned_cols=30 Identities=27% Similarity=0.312 Sum_probs=25.4
Q ss_pred CCCCCeEEEEecCCCC-CCCceEEeecHHHH
Q 014951 124 KKKTNISTIMYTSGTT-GEPKGVVLTNQAIV 153 (415)
Q Consensus 124 ~~~~~~~~i~~TSGtT-G~pK~v~~th~~l~ 153 (415)
..++.+.++..||||| |.+|-|++|...+-
T Consensus 97 L~~~pi~~f~~SSGTT~g~~K~IP~T~~~l~ 127 (597)
T PLN02249 97 LSSHPITEFLTSSGTSAGERKLMPTIEEDID 127 (597)
T ss_pred eCCCchhhhcccCCCCCCceeEEeccHHHHH
Confidence 4467778899999999 88999999997665
No 135
>PLN02247 indole-3-acetic acid-amido synthetase
Probab=95.54 E-value=0.52 Score=46.43 Aligned_cols=32 Identities=25% Similarity=0.407 Sum_probs=26.3
Q ss_pred CCCCeEEEEecCCCCC-CCceEEeecHHHHHHh
Q 014951 125 KKTNISTIMYTSGTTG-EPKGVVLTNQAIVAEV 156 (415)
Q Consensus 125 ~~~~~~~i~~TSGtTG-~pK~v~~th~~l~~~~ 156 (415)
.+..+.++.-|||||| .+|-|++|+..+-...
T Consensus 87 t~~pi~~F~~SSGTT~g~~K~IP~t~e~l~~~~ 119 (606)
T PLN02247 87 SAQPITELLTSSGTSGGQPKLMPSTAEELDRKT 119 (606)
T ss_pred CCCCcceeeccCCCCCCceeEeeccHHHHHHHH
Confidence 3677788999999995 8999999998765543
No 136
>PLN02620 indole-3-acetic acid-amido synthetase
Probab=95.09 E-value=1.9 Score=42.60 Aligned_cols=32 Identities=25% Similarity=0.258 Sum_probs=26.0
Q ss_pred CCCCCeEEEEecCCCCC-CCceEEeecHHHHHH
Q 014951 124 KKKTNISTIMYTSGTTG-EPKGVVLTNQAIVAE 155 (415)
Q Consensus 124 ~~~~~~~~i~~TSGtTG-~pK~v~~th~~l~~~ 155 (415)
..+..+.++.-|||||| .+|-+++|+..+-..
T Consensus 98 L~~~pi~~F~~SSGTT~g~~K~IP~t~e~l~~~ 130 (612)
T PLN02620 98 LCSKPISEFLTSSGTSGGERKLMPTIEEELGRR 130 (612)
T ss_pred cCCCChhhhhhcCCCCCCceeeeecCHHHHHHH
Confidence 34566778999999997 599999999977653
No 137
>PF00501 AMP-binding: AMP-binding enzyme; InterPro: IPR000873 A number of prokaryotic and eukaryotic enzymes, which appear to act via an ATP-dependent covalent binding of AMP to their substrate, share a region of sequence similarity [, , ]. This region is a Ser/Thr/Gly-rich domain that is further characterised by a conserved Pro-Lys-Gly triplet. The family of enzymes includes luciferase, long chain fatty acid Co-A ligase, acetyl-CoA synthetase and various other closely-related synthetases.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 2V7B_A 2Y4O_B 2VSQ_A 3L8C_B 1RY2_A 3KXW_A 3LNV_A 3ETC_B 3A9U_A 3A9V_A ....
Probab=79.93 E-value=18 Score=34.12 Aligned_cols=90 Identities=14% Similarity=0.075 Sum_probs=69.0
Q ss_pred CCCCeEEEEecCCCCCCCceEEeecHHHHHHhhhhhhhhhhccccCCCCCEEEEeCChhhHHHHHHHHHhhhcCcEEEEe
Q 014951 125 KKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFW 204 (415)
Q Consensus 125 ~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~vv~~ 204 (415)
.++.+|++. -..-.+|+..+...+..+...+. ..++++++++..+.+-.. ..+..+++++..|+..+.+
T Consensus 8 ~pd~~a~~~--------~~~~~~Ty~~l~~~v~~la~~L~--~~g~~~~~~V~i~~~n~~-~~~~~~~A~~~~G~~~v~l 76 (417)
T PF00501_consen 8 YPDRIALID--------DEGRSLTYKQLYERVRKLAAALR--KLGVKKGDRVAILLPNSI-EFVVAFLACLRAGAIPVPL 76 (417)
T ss_dssp STTSEEEEE--------TTTEEEEHHHHHHHHHHHHHHHH--HTTSSTTSEEEEEESSSH-HHHHHHHHHHHTT-EEEEE
T ss_pred CCCceEEEE--------CCCEEEEHHHHHHHHHHHhhHHH--HhCCCccccccccCCccc-eeeeeeccccccccccccc
Confidence 356777665 23457899999999888877653 336788998888877753 3355678889999999998
Q ss_pred CC--CHHHHHHHHHhhCCeEEEe
Q 014951 205 RG--DVRYLMEDIQELKPTMFSG 225 (415)
Q Consensus 205 ~~--~~~~~~~~i~~~~~t~~~~ 225 (415)
+. ...++...+++.+++++++
T Consensus 77 ~~~~~~~~~~~~l~~~~~~~ii~ 99 (417)
T PF00501_consen 77 DPSLSEDELRHILRQSGPKVIIT 99 (417)
T ss_dssp ETTSSHHHHHHHHHHHTESEEEE
T ss_pred ccccccccccccccccceeEEEE
Confidence 76 8899999999999999996
No 138
>KOG1176 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=74.10 E-value=44 Score=32.95 Aligned_cols=93 Identities=13% Similarity=0.124 Sum_probs=73.9
Q ss_pred eEEeecHHHHHHhhhhhhhhhhccccCCCCCEEEEeCChhhHHHHHHHHHhhhcCcEEEEeCC--CHHHHHHHHHhhCCe
Q 014951 144 GVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG--DVRYLMEDIQELKPT 221 (415)
Q Consensus 144 ~v~~th~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~vv~~~~--~~~~~~~~i~~~~~t 221 (415)
+..+|+..+...+..++..+.......+++|++....|-...+ ....++++..|+.+.-... +..++...++..++.
T Consensus 43 g~~~T~~e~~~~~~r~A~~L~~~~~~i~~gDvV~i~~pNs~~~-~~~~la~~~~Ga~~~~~Np~~~~~ei~~~~~~s~~k 121 (537)
T KOG1176|consen 43 GRELTYSELHDRCRRLASALSELGLGIKKGDVVGILAPNTPEF-VELALAVPMAGAVLNPLNPRLTASEIAKQLKDSKPK 121 (537)
T ss_pred CcEEcHHHHHHHHHHHHHHHHhcCCCCCCCCEEEEEcCCCHHH-HHHHHHHHHcCccccccCcccCHHHHHHHHHhcCCe
Confidence 7799999999999888877643333578899999999987533 2346677888888877655 999999999999999
Q ss_pred EEEeCcHHHHHHHHHH
Q 014951 222 MFSGVPRVYDRIYTGI 237 (415)
Q Consensus 222 ~~~~~P~~~~~l~~~~ 237 (415)
+++.....+..+.+..
T Consensus 122 iif~d~~~~~~i~~~~ 137 (537)
T KOG1176|consen 122 LIFVDEDFYDKISEAT 137 (537)
T ss_pred EEEEcCchHHHHHHHH
Confidence 9999998888775543
No 139
>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]
Probab=68.42 E-value=29 Score=31.32 Aligned_cols=72 Identities=13% Similarity=0.139 Sum_probs=55.1
Q ss_pred CccCCCCCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEcCCChhhhhhcCc
Q 014951 1 MRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLP 75 (415)
Q Consensus 1 L~~~Gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~ 75 (415)
|.+.|++||.+|+|..--+.-.+.+.+|.+. |..+..|+... ..-+..++..++++.+...+..+.......
T Consensus 174 Lk~~g~~pG~~vgI~GlGGLGh~aVq~AKAM-G~rV~vis~~~--~kkeea~~~LGAd~fv~~~~d~d~~~~~~~ 245 (360)
T KOG0023|consen 174 LKRSGLGPGKWVGIVGLGGLGHMAVQYAKAM-GMRVTVISTSS--KKKEEAIKSLGADVFVDSTEDPDIMKAIMK 245 (360)
T ss_pred hHHcCCCCCcEEEEecCcccchHHHHHHHHh-CcEEEEEeCCc--hhHHHHHHhcCcceeEEecCCHHHHHHHHH
Confidence 5678999999999999999999999998865 67777787643 334556788899988887765555554443
No 140
>PRK09274 peptide synthase; Provisional
Probab=66.10 E-value=60 Score=32.06 Aligned_cols=99 Identities=10% Similarity=0.049 Sum_probs=69.0
Q ss_pred CCCeEEEEecCCCC-CCCceEEeecHHHHHHhhhhhhhhhhccccCCCCCEEEEeCChhhHHHHHHHHHhhhcCcEEEEe
Q 014951 126 KTNISTIMYTSGTT-GEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFW 204 (415)
Q Consensus 126 ~~~~~~i~~TSGtT-G~pK~v~~th~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~vv~~ 204 (415)
++.++++....++. ...+...+|...+...+..+...+. ...+.++|++...++-.. ......++++..|+..+..
T Consensus 20 p~~~a~~~~~~~~~~~~~~~~~~Ty~~l~~~~~~~A~~L~--~~g~~~gd~V~~~~~n~~-~~~~~~la~~~~G~~~v~l 96 (552)
T PRK09274 20 PDQLAVAVPGGRGADGKLAYDELSFAELDARSDAIAHGLN--AAGIGRGMRAVLMVTPSL-EFFALTFALFKAGAVPVLV 96 (552)
T ss_pred CCcceEEeccCCCCccccccCcccHHHHHHHHHHHHHHHH--HcCCCCCCEEEEEeCCcH-HHHHHHHHHHHcCeEEEEc
Confidence 45566544322221 2233346899999888887766553 236788999998887543 3334577889999998887
Q ss_pred CC--CHHHHHHHHHhhCCeEEEeCc
Q 014951 205 RG--DVRYLMEDIQELKPTMFSGVP 227 (415)
Q Consensus 205 ~~--~~~~~~~~i~~~~~t~~~~~P 227 (415)
.. ..+++...+++.++..+...+
T Consensus 97 ~~~~~~~~l~~~l~~~~~~~~i~~~ 121 (552)
T PRK09274 97 DPGMGIKNLKQCLAEAQPDAFIGIP 121 (552)
T ss_pred CCCccHHHHHHHHHhcCCCEEEecc
Confidence 65 788899999999999988765
No 141
>TIGR02370 pyl_corrinoid methyltransferase cognate corrinoid proteins, Methanosarcina family. This model describes a subfamily of the B12 binding domain (pfam02607, pfam02310) proteins. Members of the seed alignment include corrinoid proteins specific to four different, mutally non-homologous enzymes of the genus Methanosarcina. Three of the four cognate enzymes (trimethylamine, dimethylamine, and monomethylamine methyltransferases) all have the unusual, ribosomally incorporated amino acid pyrrolysine at the active site. All act in systems in which a methyl group is transferred to the corrinoid protein to create methylcobalamin, from which the methyl group is later transferred elsewhere.
Probab=66.07 E-value=78 Score=26.47 Aligned_cols=55 Identities=16% Similarity=0.139 Sum_probs=39.7
Q ss_pred CEEEEeCCh--hhHHHHHH-HHHhhhcCcEEEEeCC--CHHHHHHHHHhhCCeEEEeCcH
Q 014951 174 DTYFSFLPL--AHIYDQII-ETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTMFSGVPR 228 (415)
Q Consensus 174 d~~l~~~p~--~~~~~~~~-~~~~l~~G~~vv~~~~--~~~~~~~~i~~~~~t~~~~~P~ 228 (415)
.+++...+- .|..|... ....-..|..++.... .++.+.+.+++++|+.+..+-+
T Consensus 85 ~~vv~~t~~gd~H~lG~~~v~~~l~~~G~~vi~LG~~vp~e~~v~~~~~~~pd~v~lS~~ 144 (197)
T TIGR02370 85 GKVVCGVAEGDVHDIGKNIVVTMLRANGFDVIDLGRDVPIDTVVEKVKKEKPLMLTGSAL 144 (197)
T ss_pred CeEEEEeCCCchhHHHHHHHHHHHHhCCcEEEECCCCCCHHHHHHHHHHcCCCEEEEccc
Confidence 344555444 57777664 4445567999988765 8899999999999999776543
No 142
>COG1541 PaaK Coenzyme F390 synthetase [Coenzyme metabolism]
Probab=65.76 E-value=14 Score=35.06 Aligned_cols=88 Identities=13% Similarity=-0.002 Sum_probs=61.6
Q ss_pred ccCCCCCCCeEEEEcCCc--HhHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEcCCChhhhhhcCccC--
Q 014951 2 RSRGVNPGDRCGIYGSNC--PEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRC-- 77 (415)
Q Consensus 2 ~~~Gv~~gd~V~l~~~n~--~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~-- 77 (415)
...|..+||+|..+..-+ ..-.-..+|+.++|+.++|+.+. .-+....++++.++.+|.+.+...-.+.+.+...
T Consensus 127 ~~~g~~~gd~v~~~~~yGl~tgg~~~~~ga~rig~~vip~~~g-~~~~~~~l~~df~~tvI~~tps~~l~lae~~~~~G~ 205 (438)
T COG1541 127 YSAGVRKGDKVQNAYGYGLFTGGLGLHYGAERIGATVIPISGG-NTERQLELMKDFKPTVIAATPSYLLYLAEEAEEEGI 205 (438)
T ss_pred HHccCCCCCEEEEEeeeccccCCchhHHHHHhhCEEEEccCCc-cHHHHHHHHHhcCCcEEEEChHHHHHHHHHHHHcCC
Confidence 357999999998887722 12266788999999999999874 4455667889999999999987765544433222
Q ss_pred ---CCCccEEEEecCC
Q 014951 78 ---CLYLKTIVSFANV 90 (415)
Q Consensus 78 ---~~~~~~v~~~~~~ 90 (415)
...++.++.-++.
T Consensus 206 ~~~~~~lk~~i~gaE~ 221 (438)
T COG1541 206 DPDKLSLKKGIFGAEP 221 (438)
T ss_pred ChhhcceeEEEEeccc
Confidence 2345555555444
No 143
>TIGR02155 PA_CoA_ligase phenylacetate-CoA ligase. Phenylacetate-CoA ligase (PA-CoA ligase) catalyzes the first step in aromatic catabolism of phenylacetic acid (PA) into phenylacetyl-CoA (PA-CoA). Often located in a conserved gene cluster with enzymes involved in phenylacetic acid activation (paaG/H/I/J), phenylacetate-CoA ligase has been found among the proteobacteria as well as in gram positive prokaryotes. In the B-subclass proteobacterium Azoarcus evansii, phenylacetate-CoA ligase has been shown to be induced under aerobic and anaerobic growth conditions. It remains unclear however, whether this induction is due to the same enzyme or to another isoenzyme restricted to specific anaerobic growth conditions.
Probab=65.31 E-value=16 Score=34.87 Aligned_cols=67 Identities=18% Similarity=0.103 Sum_probs=50.8
Q ss_pred CCCCCCCeEEEEcCCcH--hHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEcCCChhhhh
Q 014951 4 RGVNPGDRCGIYGSNCP--EWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSIL 71 (415)
Q Consensus 4 ~Gv~~gd~V~l~~~n~~--~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~ 71 (415)
.|+++||++......+. ......++....|+.++++++.. .+.+-..++..++.+++........+.
T Consensus 114 ~g~~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~~i~~~~~t~l~~~Ps~l~~L~ 182 (422)
T TIGR02155 114 AGGRPGDLIHNAYGYGLFTGGLGAHYGAEKLGCTVVPISGGQ-TEKQVQLIQDFKPDIIMVTPSYMLNLL 182 (422)
T ss_pred cCCCCCcEEEEccCccccchhHHHHHHHHHcCcEEEecCCCC-HHHHHHHHHHHCCCEEEEcHHHHHHHH
Confidence 58999999887765442 22334677889999999887654 577888999999999999887665544
No 144
>PF06543 Lac_bphage_repr: Lactococcus bacteriophage repressor; InterPro: IPR009498 This entry represents the C terminus of various Lactococcus bacteriophage repressor proteins.
Probab=64.42 E-value=5.2 Score=24.18 Aligned_cols=26 Identities=23% Similarity=0.284 Sum_probs=21.9
Q ss_pred eEEEEecCCCCHHHHHHHHHhcCCce
Q 014951 293 QAMLSGAAPLPIHVEEFLRVTSGAPL 318 (415)
Q Consensus 293 r~v~~~G~~~~~~~~~~~~~~~~~~~ 318 (415)
+.+.++|.|++.+....++..++-++
T Consensus 22 ~wvSf~GrPltdevK~a~k~i~~~~l 47 (49)
T PF06543_consen 22 KWVSFDGRPLTDEVKEAMKLIFGKRL 47 (49)
T ss_pred HheeeCCeeCCHHHHHHHHHHHhhhc
Confidence 67889999999999999988776543
No 145
>PRK06187 long-chain-fatty-acid--CoA ligase; Validated
Probab=64.32 E-value=92 Score=30.29 Aligned_cols=85 Identities=7% Similarity=-0.135 Sum_probs=66.3
Q ss_pred eecHHHHHHhhhhhhhhhhccccCCCCCEEEEeCChhhHHHHHHHHHhhhcCcEEEEeCC--CHHHHHHHHHhhCCeEEE
Q 014951 147 LTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTMFS 224 (415)
Q Consensus 147 ~th~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~vv~~~~--~~~~~~~~i~~~~~t~~~ 224 (415)
+|...+...+..+...+. ..+++.++++..+.|-.. .....+++++..|+..+..+. ....+...+++.++..++
T Consensus 32 ~Ty~~l~~~~~~~a~~L~--~~g~~~~~~V~l~~~~~~-~~~~~~la~~~~G~~~v~~~~~~~~~~~~~~i~~~~~~~i~ 108 (521)
T PRK06187 32 TTYAELDERVNRLANALR--ALGVKKGDRVAVFDWNSH-EYLEAYFAVPKIGAVLHPINIRLKPEEIAYILNDAEDRVVL 108 (521)
T ss_pred EcHHHHHHHHHHHHHHHH--HcCCCCCCEEEEECCCCH-HHHHHHHHHHHcCeEEEecccCCCHHHHHHHHHhcCCeEEE
Confidence 898988888877766543 236788999998888765 334457788999999888876 788999999999999999
Q ss_pred eCcHHHHHHH
Q 014951 225 GVPRVYDRIY 234 (415)
Q Consensus 225 ~~P~~~~~l~ 234 (415)
........+.
T Consensus 109 ~~~~~~~~~~ 118 (521)
T PRK06187 109 VDSEFVPLLA 118 (521)
T ss_pred EcchHHHHHH
Confidence 8887766553
No 146
>PLN03102 acyl-activating enzyme; Provisional
Probab=64.32 E-value=88 Score=31.23 Aligned_cols=85 Identities=8% Similarity=-0.013 Sum_probs=65.2
Q ss_pred EeecHHHHHHhhhhhhhhhhccccCCCCCEEEEeCChhhHHHHHHHHHhhhcCcEEEEeCC--CHHHHHHHHHhhCCeEE
Q 014951 146 VLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTMF 223 (415)
Q Consensus 146 ~~th~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~vv~~~~--~~~~~~~~i~~~~~t~~ 223 (415)
.+|...+...+..+...+. ..++.++|++..++|-.- .....+++++..|+.++.... +++++...++..+++.+
T Consensus 39 ~~Ty~eL~~~~~~~a~~L~--~~Gl~~gd~Vai~~~n~~-e~~~~~la~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~i 115 (579)
T PLN03102 39 RFTWPQTYDRCCRLAASLI--SLNITKNDVVSVLAPNTP-AMYEMHFAVPMAGAVLNPINTRLDATSIAAILRHAKPKIL 115 (579)
T ss_pred EEEHHHHHHHHHHHHHHHH--HcCCCCCCEEEEEcCCcH-HHHHHHHHHHhcCcEEeeccccCCHHHHHHHHhccCCeEE
Confidence 5899998888887766543 236788999998888543 223346788889999888766 89999999999999999
Q ss_pred EeCcHHHHHH
Q 014951 224 SGVPRVYDRI 233 (415)
Q Consensus 224 ~~~P~~~~~l 233 (415)
++.+.....+
T Consensus 116 i~~~~~~~~~ 125 (579)
T PLN03102 116 FVDRSFEPLA 125 (579)
T ss_pred EEChhhHHHH
Confidence 9877655443
No 147
>PLN02736 long-chain acyl-CoA synthetase
Probab=64.24 E-value=1.3e+02 Score=30.63 Aligned_cols=88 Identities=7% Similarity=-0.057 Sum_probs=67.3
Q ss_pred EEeecHHHHHHhhhhhhhhhhccccCCCCCEEEEeCChhhHHHHHHHHHhhhcCcEEEEeCC--CHHHHHHHHHhhCCeE
Q 014951 145 VVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTM 222 (415)
Q Consensus 145 v~~th~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~vv~~~~--~~~~~~~~i~~~~~t~ 222 (415)
..+|...+...+..+...+. ..++.++|++...++-..- .....++++..|+.++.+.. .++++...++..+++.
T Consensus 77 ~~lTy~el~~~v~~lA~~L~--~~Gv~~gd~Vai~~~n~~e-~~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~~~~~~ 153 (651)
T PLN02736 77 KWMTYGEAGTARTAIGSGLV--QHGIPKGACVGLYFINRPE-WLIVDHACSAYSYVSVPLYDTLGPDAVKFIVNHAEVAA 153 (651)
T ss_pred EEEEHHHHHHHHHHHHHHHH--HhCCCCCCEEEEEcCCCHH-HHHHHHHHHHcCCeEEEeecCCCHHHHHHHHhccCCCE
Confidence 45799999888887766542 2367899999888776542 22346778888999887765 8999999999999999
Q ss_pred EEeCcHHHHHHHH
Q 014951 223 FSGVPRVYDRIYT 235 (415)
Q Consensus 223 ~~~~P~~~~~l~~ 235 (415)
+++.+..+..+..
T Consensus 154 l~~~~~~~~~~~~ 166 (651)
T PLN02736 154 IFCVPQTLNTLLS 166 (651)
T ss_pred EEECHHHHHHHHH
Confidence 9998877665543
No 148
>PLN03052 acetate--CoA ligase; Provisional
Probab=63.52 E-value=1.1e+02 Score=31.73 Aligned_cols=101 Identities=15% Similarity=0.104 Sum_probs=72.6
Q ss_pred CCCCeEEEEecCCCCCCCceEEeecHHHHHHhhhhhhhhhhccccCCCCCEEEEeCChhhHHHHHHHHHhhhcCcEEEEe
Q 014951 125 KKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFW 204 (415)
Q Consensus 125 ~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~vv~~ 204 (415)
.++.+|++.-..+..+.+ ...+|...+...+..+...+. ..+..++|++..++|..- -....+++++..|+..+.+
T Consensus 188 ~pd~~Ai~~~~e~~~~~~-~~~~Ty~eL~~~v~~lA~~L~--~~Gv~~GdrVai~~pn~~-e~via~LA~~~~Gav~vpi 263 (728)
T PLN03052 188 TDDSIAIIWRDEGSDDLP-VNRMTLSELRSQVSRVANALD--ALGFEKGDAIAIDMPMNV-HAVIIYLAIILAGCVVVSI 263 (728)
T ss_pred CCCCeEEEEECCCCCCCc-eEEeeHHHHHHHHHHHHHHHH--HcCCCCCCEEEEEeCCCH-HHHHHHHHHHHcCCEEEee
Confidence 356677554332221222 356899999888887776553 236789999999999753 3344577888899998877
Q ss_pred CC--CHHHHHHHHHhhCCeEEEeCcHH
Q 014951 205 RG--DVRYLMEDIQELKPTMFSGVPRV 229 (415)
Q Consensus 205 ~~--~~~~~~~~i~~~~~t~~~~~P~~ 229 (415)
.. .++++...++..++..+++....
T Consensus 264 ~p~~~~~~l~~rl~~~~~k~lit~d~~ 290 (728)
T PLN03052 264 ADSFAPSEIATRLKISKAKAIFTQDVI 290 (728)
T ss_pred CCCCCHHHHHHHHHhcCceEEEEcCcc
Confidence 65 89999999999999999887643
No 149
>PRK08316 acyl-CoA synthetase; Validated
Probab=62.63 E-value=99 Score=30.14 Aligned_cols=88 Identities=11% Similarity=-0.070 Sum_probs=68.0
Q ss_pred EEeecHHHHHHhhhhhhhhhhccccCCCCCEEEEeCChhhHHHHHHHHHhhhcCcEEEEeCC--CHHHHHHHHHhhCCeE
Q 014951 145 VVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTM 222 (415)
Q Consensus 145 v~~th~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~vv~~~~--~~~~~~~~i~~~~~t~ 222 (415)
..+|...+...+..+...+.. .++.+++++..+.+-.. .....+++++..|+..+.... ....+...+++.++..
T Consensus 35 ~~~Ty~~l~~~~~~~a~~L~~--~gi~~~~~V~l~~~~~~-~~~~~~~a~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~ 111 (523)
T PRK08316 35 RSWTYAELDAAVNRVAAALLD--LGLKKGDRVAALGHNSD-AYALLWLACARAGAVHVPVNFMLTGEELAYILDHSGARA 111 (523)
T ss_pred ceeeHHHHHHHHHHHHHHHHH--cCCCCCCEEEEECCCCH-HHHHHHHHHHhcCcEEEecccccCHHHHHHHHHhCCCCE
Confidence 568999988888777665532 36788999988877655 344457788999999888765 7889999999999999
Q ss_pred EEeCcHHHHHHHH
Q 014951 223 FSGVPRVYDRIYT 235 (415)
Q Consensus 223 ~~~~P~~~~~l~~ 235 (415)
++........+.+
T Consensus 112 ii~~~~~~~~~~~ 124 (523)
T PRK08316 112 FLVDPALAPTAEA 124 (523)
T ss_pred EEEccchHHHHHH
Confidence 9998877766543
No 150
>PTZ00237 acetyl-CoA synthetase; Provisional
Probab=62.05 E-value=1.2e+02 Score=30.95 Aligned_cols=96 Identities=16% Similarity=0.232 Sum_probs=70.3
Q ss_pred CCCeEEEEecCCCCCCCceEEeecHHHHHHhhhhhhhhhhccccCCCCCEEEEeCChhhHHHHHHHHHhhhcCcEEEEeC
Q 014951 126 KTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWR 205 (415)
Q Consensus 126 ~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~vv~~~ 205 (415)
++.+|++ +-+...+ ....+|...+...+..+...+. ..++.++|++..++|..-- ....+++++..|+..+...
T Consensus 75 ~~~~A~~-~~~~~~~--~~~~~Ty~eL~~~v~~lA~~L~--~~Gv~~GDrV~i~~~n~~e-~~~~~lA~~~~Gav~vpl~ 148 (647)
T PTZ00237 75 RDQDALI-YECPYLK--KTIKLTYYQLYEKVCEFSRVLL--NLNISKNDNVLIYMANTLE-PLIAMLSCARIGATHCVLF 148 (647)
T ss_pred CCceEEE-EEcCCCC--ceEEEEHHHHHHHHHHHHHHHH--HcCCCCCCEEEEECCCCHH-HHHHHHHHHHhCcEEEeeC
Confidence 4566654 4322111 2357999999998888877653 3378899999999998642 2335777888899877765
Q ss_pred C--CHHHHHHHHHhhCCeEEEeCc
Q 014951 206 G--DVRYLMEDIQELKPTMFSGVP 227 (415)
Q Consensus 206 ~--~~~~~~~~i~~~~~t~~~~~P 227 (415)
. .++++...++..+++.+++..
T Consensus 149 ~~~~~~~l~~~l~~~~~~~li~~~ 172 (647)
T PTZ00237 149 DGYSVKSLIDRIETITPKLIITTN 172 (647)
T ss_pred CCCCHHHHHHHHHhcCCCEEEEcc
Confidence 4 899999999999999998865
No 151
>PRK03584 acetoacetyl-CoA synthetase; Provisional
Probab=61.69 E-value=1.1e+02 Score=31.03 Aligned_cols=97 Identities=11% Similarity=0.123 Sum_probs=70.7
Q ss_pred CCCCeEEEEecCCCCCCCceEEeecHHHHHHhhhhhhhhhhccccCCCCCEEEEeCChhhHHHHHHHHHhhhcCcEEEEe
Q 014951 125 KKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFW 204 (415)
Q Consensus 125 ~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~vv~~ 204 (415)
.++.+|++.... .| ....+|...+...+..+...+. ...+.++|++..++|..- -....+++++..|+..+.+
T Consensus 97 ~~~~~Al~~~~~--~~--~~~~~Ty~eL~~~v~~lA~~L~--~~Gv~~gd~V~i~~~n~~-e~v~~~lA~~~~Gav~v~l 169 (655)
T PRK03584 97 RDDRPAIIFRGE--DG--PRRELSWAELRRQVAALAAALR--ALGVGPGDRVAAYLPNIP-ETVVAMLATASLGAIWSSC 169 (655)
T ss_pred CCCCeEEEEECC--CC--ceEEEeHHHHHHHHHHHHHHHH--HcCCCCCCEEEEEcCCCH-HHHHHHHHHHHcCcEEEee
Confidence 356677654322 22 1356899999988887766553 236789999999998653 3344577889999998877
Q ss_pred CC--CHHHHHHHHHhhCCeEEEeCcH
Q 014951 205 RG--DVRYLMEDIQELKPTMFSGVPR 228 (415)
Q Consensus 205 ~~--~~~~~~~~i~~~~~t~~~~~P~ 228 (415)
.. .+..+...++..++..+++...
T Consensus 170 ~~~~~~~~l~~~l~~~~~~~li~~~~ 195 (655)
T PRK03584 170 SPDFGVQGVLDRFGQIEPKVLIAVDG 195 (655)
T ss_pred CCCCCHHHHHHHHHHcCCcEEEEccc
Confidence 65 7899999999999999888654
No 152
>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]
Probab=60.56 E-value=38 Score=31.03 Aligned_cols=60 Identities=8% Similarity=0.090 Sum_probs=47.0
Q ss_pred CccCCCCCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEcC
Q 014951 1 MRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQE 64 (415)
Q Consensus 1 L~~~Gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~ii~~~ 64 (415)
|++.+++||++|+|..--+.-.+.+++|-+. |+.++.++.+... ....++..++.++...
T Consensus 159 lk~~~~~pG~~V~I~G~GGlGh~avQ~Aka~-ga~Via~~~~~~K---~e~a~~lGAd~~i~~~ 218 (339)
T COG1064 159 LKKANVKPGKWVAVVGAGGLGHMAVQYAKAM-GAEVIAITRSEEK---LELAKKLGADHVINSS 218 (339)
T ss_pred hhhcCCCCCCEEEEECCcHHHHHHHHHHHHc-CCeEEEEeCChHH---HHHHHHhCCcEEEEcC
Confidence 5678999999999999999999999998754 4888888764333 3445677888888764
No 153
>PRK07788 acyl-CoA synthetase; Validated
Probab=60.51 E-value=65 Score=31.80 Aligned_cols=85 Identities=9% Similarity=-0.100 Sum_probs=66.2
Q ss_pred EeecHHHHHHhhhhhhhhhhccccCCCCCEEEEeCChhhHHHHHHHHHhhhcCcEEEEeCC--CHHHHHHHHHhhCCeEE
Q 014951 146 VLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTMF 223 (415)
Q Consensus 146 ~~th~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~vv~~~~--~~~~~~~~i~~~~~t~~ 223 (415)
.+|...+...+..+...+.. .++.++|++...++-.- .....+++++..|+.++..+. ..+++...+++.++..+
T Consensus 74 ~~Ty~el~~~~~~la~~L~~--~gi~~gd~V~i~~~n~~-~~~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i 150 (549)
T PRK07788 74 TLTYAELDEQSNALARGLLA--LGVRAGDGVAVLARNHR-GFVLALYAAGKVGARIILLNTGFSGPQLAEVAAREGVKAL 150 (549)
T ss_pred ceeHHHHHHHHHHHHHHHHH--cCCCCCCEEEEEcCCCH-HHHHHHHHHHhcCCEEEEeCCCCCHHHHHHHHHhcCCcEE
Confidence 58999998888777665532 36778999988876542 333457788999999998876 88999999999999999
Q ss_pred EeCcHHHHHH
Q 014951 224 SGVPRVYDRI 233 (415)
Q Consensus 224 ~~~P~~~~~l 233 (415)
+..+.....+
T Consensus 151 i~~~~~~~~~ 160 (549)
T PRK07788 151 VYDDEFTDLL 160 (549)
T ss_pred EECchhHHHH
Confidence 9888766554
No 154
>TIGR02188 Ac_CoA_lig_AcsA acetate--CoA ligase. This model describes acetate-CoA ligase (EC 6.2.1.1), also called acetyl-CoA synthetase and acetyl-activating enzyme. It catalyzes the reaction ATP + acetate + CoA = AMP + diphosphate + acetyl-CoA and belongs to the family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=60.00 E-value=1.2e+02 Score=30.63 Aligned_cols=98 Identities=13% Similarity=0.173 Sum_probs=71.6
Q ss_pred CCCCeEEEEecCCCCCCCceEEeecHHHHHHhhhhhhhhhhccccCCCCCEEEEeCChhhHHHHHHHHHhhhcCcEEEEe
Q 014951 125 KKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFW 204 (415)
Q Consensus 125 ~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~vv~~ 204 (415)
.++.+|++... ..+| ....+|...+...+..+...+. ..+..++|++...+|..- -....+++++..|+..+..
T Consensus 70 ~p~~~Al~~~~-~~~~--~~~~~Ty~eL~~~v~~lA~~L~--~~Gv~~gd~V~i~~~n~~-e~~~~~lA~~~~Gav~v~i 143 (625)
T TIGR02188 70 RPDKVAIIWEG-DEPG--EVRKITYRELHREVCRFANVLK--SLGVKKGDRVAIYMPMIP-EAAIAMLACARIGAIHSVV 143 (625)
T ss_pred CCCCeEEEEEc-CCCC--ceEEEEHHHHHHHHHHHHHHHH--HcCCCCCCEEEEECCCCH-HHHHHHHHHHHhCCEEecc
Confidence 45677765432 2122 2457899999888887776553 236789999999988653 3344577888899998877
Q ss_pred CC--CHHHHHHHHHhhCCeEEEeCcH
Q 014951 205 RG--DVRYLMEDIQELKPTMFSGVPR 228 (415)
Q Consensus 205 ~~--~~~~~~~~i~~~~~t~~~~~P~ 228 (415)
.. .+..+...++..++..++....
T Consensus 144 ~~~~~~~~l~~~l~~~~~~~li~~~~ 169 (625)
T TIGR02188 144 FGGFSAEALADRINDAGAKLVITADE 169 (625)
T ss_pred CCCCCHHHHHHHHHhcCCCEEEEcCc
Confidence 55 8899999999999999988764
No 155
>PRK07656 long-chain-fatty-acid--CoA ligase; Validated
Probab=59.77 E-value=1.2e+02 Score=29.35 Aligned_cols=85 Identities=9% Similarity=-0.072 Sum_probs=64.7
Q ss_pred EeecHHHHHHhhhhhhhhhhccccCCCCCEEEEeCChhhHHHHHHHHHhhhcCcEEEEeCC--CHHHHHHHHHhhCCeEE
Q 014951 146 VLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTMF 223 (415)
Q Consensus 146 ~~th~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~vv~~~~--~~~~~~~~i~~~~~t~~ 223 (415)
.+|...+...+..+...+. ..+..++|++..+.+-.. .....+++++..|+..+..+. ....+.+.+++.++..+
T Consensus 30 ~~Ty~~l~~~~~~~a~~L~--~~gv~~g~~V~l~~~~~~-~~~~~~la~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~i 106 (513)
T PRK07656 30 RLTYAELNARVRRAAAALA--ALGIGKGDRVAIWAPNSP-HWVIAALGALKAGAVVVPLNTRYTADEAAYILARGDAKAL 106 (513)
T ss_pred ceeHHHHHHHHHHHHHHHH--HcCCCCCCEEEEECCCCh-HHHHHHHHHHhcCeEEEecCcccCHHHHHHHHhhcCceEE
Confidence 5888988888777766542 236778999988876653 333456788999999988766 78899999999999999
Q ss_pred EeCcHHHHHH
Q 014951 224 SGVPRVYDRI 233 (415)
Q Consensus 224 ~~~P~~~~~l 233 (415)
+..+.....+
T Consensus 107 i~~~~~~~~~ 116 (513)
T PRK07656 107 FVLGLFLGVD 116 (513)
T ss_pred EEchhhHHHH
Confidence 9887765544
No 156
>TIGR03098 ligase_PEP_1 acyl-CoA ligase (AMP-forming), exosortase system type 1 associated. This group of proteins contains an AMP-binding domain (pfam00501) associated with acyl CoA-ligases. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present next to a decarboxylase enzyme. A number of sequences from Burkholderia species also hit this model, but the genomic context is obviously different. The hypothesis of a constant substrate for this family is only strong where the exosortase context is present.
Probab=59.54 E-value=1.2e+02 Score=29.45 Aligned_cols=85 Identities=11% Similarity=0.017 Sum_probs=65.2
Q ss_pred EeecHHHHHHhhhhhhhhhhccccCCCCCEEEEeCChhhHHHHHHHHHhhhcCcEEEEeCC--CHHHHHHHHHhhCCeEE
Q 014951 146 VLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTMF 223 (415)
Q Consensus 146 ~~th~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~vv~~~~--~~~~~~~~i~~~~~t~~ 223 (415)
.+|...+...+..+...+. ......++++..+++-.. ......++++..|+..+.... .+.++...+++.+++.+
T Consensus 25 ~~ty~~l~~~v~~~a~~l~--~~g~~~~~~V~i~~~n~~-~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~~ 101 (515)
T TIGR03098 25 TLTYAALSERVLALASGLR--GLGLARGERVAIYLDKRL-ETVTAMFGAALAGGVFVPINPLLKAEQVAHILADCNVRLL 101 (515)
T ss_pred eeeHHHHHHHHHHHHHHHH--HcCCCCCCEEEEEcCCCH-HHHHHHHHHHhcCEEEEeCCCCCCHHHHHHHHHcCCCeEE
Confidence 6899999888877766543 236678899988877654 334456788899999887765 88999999999999999
Q ss_pred EeCcHHHHHH
Q 014951 224 SGVPRVYDRI 233 (415)
Q Consensus 224 ~~~P~~~~~l 233 (415)
+..+..+..+
T Consensus 102 i~~~~~~~~~ 111 (515)
T TIGR03098 102 VTSSERLDLL 111 (515)
T ss_pred EEccchhhhh
Confidence 8887665544
No 157
>PRK13295 cyclohexanecarboxylate-CoA ligase; Reviewed
Probab=59.46 E-value=1.1e+02 Score=30.34 Aligned_cols=97 Identities=12% Similarity=0.033 Sum_probs=69.9
Q ss_pred CCCeEEEEecCCCCCCCceEEeecHHHHHHhhhhhhhhhhccccCCCCCEEEEeCChhhHHHHHHHHHhhhcCcEEEEeC
Q 014951 126 KTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWR 205 (415)
Q Consensus 126 ~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~vv~~~ 205 (415)
++.++++..- ++.++...+|...+...+..+...+. ..++.++|++...++-.... ....++++..|+..+...
T Consensus 38 p~~~A~~~~~---~~~~~~~~~Ty~el~~~~~~~a~~L~--~~g~~~g~~Val~~~n~~e~-~~~~la~~~~G~~~vpl~ 111 (547)
T PRK13295 38 PDKTAVTAVR---LGTGAPRRFTYRELAALVDRVAVGLA--RLGVGRGDVVSCQLPNWWEF-TVLYLACSRIGAVLNPLM 111 (547)
T ss_pred CCceEEEecC---CCccccceeeHHHHHHHHHHHHHHHH--HhCCCCCCEEEEECCCChHH-HHHHHHHHhcCcEEeccc
Confidence 4566665432 22334457899999888877766543 23678899999888865433 445678888999988776
Q ss_pred C--CHHHHHHHHHhhCCeEEEeCcH
Q 014951 206 G--DVRYLMEDIQELKPTMFSGVPR 228 (415)
Q Consensus 206 ~--~~~~~~~~i~~~~~t~~~~~P~ 228 (415)
. ..+++...++..++..+.....
T Consensus 112 ~~~~~~~l~~~l~~~~~~~li~~~~ 136 (547)
T PRK13295 112 PIFRERELSFMLKHAESKVLVVPKT 136 (547)
T ss_pred cccCHHHHHHHHHhcCceEEEEecc
Confidence 5 8889999999999999887654
No 158
>cd02069 methionine_synthase_B12_BD B12 binding domain of methionine synthase. This domain binds methylcobalamin, which it uses as an intermediate methyl carrier from methyltetrahydrofolate (CH3H4folate) to homocysteine (Hcy).
Probab=58.89 E-value=1.1e+02 Score=25.93 Aligned_cols=55 Identities=9% Similarity=0.009 Sum_probs=38.7
Q ss_pred CEEEEeCCh-hhHHHHHH-HHHhhhcCcEEEEeCC--CHHHHHHHHHhhCCeEEEeCcH
Q 014951 174 DTYFSFLPL-AHIYDQII-ETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTMFSGVPR 228 (415)
Q Consensus 174 d~~l~~~p~-~~~~~~~~-~~~~l~~G~~vv~~~~--~~~~~~~~i~~~~~t~~~~~P~ 228 (415)
.+++.+.+- .|..|... ....-..|..++.... .++.+.+.+++++|+++..+-.
T Consensus 90 ~vvl~t~~gd~HdiG~~iv~~~l~~~G~~Vi~LG~~vp~e~~v~~~~~~~~~~V~lS~~ 148 (213)
T cd02069 90 KIVLATVKGDVHDIGKNLVGVILSNNGYEVIDLGVMVPIEKILEAAKEHKADIIGLSGL 148 (213)
T ss_pred eEEEEeCCCchhHHHHHHHHHHHHhCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEccc
Confidence 334444432 46666654 4445667999998875 8999999999999999776543
No 159
>PRK00174 acetyl-CoA synthetase; Provisional
Probab=58.69 E-value=1.3e+02 Score=30.51 Aligned_cols=99 Identities=11% Similarity=0.124 Sum_probs=71.5
Q ss_pred CCCCeEEEEecCCCCCCCceEEeecHHHHHHhhhhhhhhhhccccCCCCCEEEEeCChhhHHHHHHHHHhhhcCcEEEEe
Q 014951 125 KKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFW 204 (415)
Q Consensus 125 ~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~vv~~ 204 (415)
.++.+|++.... . ......+|.+.+...+..+...+. ..+..++|++...+|-.-. ....+++++..|+..+..
T Consensus 80 ~p~~~Al~~~~~-~--~~~~~~lTy~eL~~~v~~lA~~L~--~~Gv~~gd~V~i~~~n~~e-~~~~~lA~~~~Gav~v~l 153 (637)
T PRK00174 80 RGDKVAIIWEGD-D--PGDSRKITYRELHREVCRFANALK--SLGVKKGDRVAIYMPMIPE-AAVAMLACARIGAVHSVV 153 (637)
T ss_pred CCCCeEEEEECC-C--CCceEEEEHHHHHHHHHHHHHHHH--HcCCCCCCEEEEEcCCCHH-HHHHHHHHHHcCCEEEec
Confidence 367777654221 1 113567899999998888776553 2367899999988876542 233467888899998887
Q ss_pred CC--CHHHHHHHHHhhCCeEEEeCcHH
Q 014951 205 RG--DVRYLMEDIQELKPTMFSGVPRV 229 (415)
Q Consensus 205 ~~--~~~~~~~~i~~~~~t~~~~~P~~ 229 (415)
.. .+.++...++..++..++.....
T Consensus 154 ~~~~~~~~l~~~l~~~~~~~li~~~~~ 180 (637)
T PRK00174 154 FGGFSAEALADRIIDAGAKLVITADEG 180 (637)
T ss_pred CCCCCHHHHHHHHHhcCCcEEEEcCcc
Confidence 65 88999999999999999876543
No 160
>PLN02246 4-coumarate--CoA ligase
Probab=58.27 E-value=1.3e+02 Score=29.56 Aligned_cols=86 Identities=9% Similarity=-0.038 Sum_probs=65.0
Q ss_pred EEeecHHHHHHhhhhhhhhhhccccCCCCCEEEEeCChhhHHHHHHHHHhhhcCcEEEEeCC--CHHHHHHHHHhhCCeE
Q 014951 145 VVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTM 222 (415)
Q Consensus 145 v~~th~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~vv~~~~--~~~~~~~~i~~~~~t~ 222 (415)
..+|+..+...+..+...+.. ..+.++|++....+-.. .....+++++..|+..+.... ...++...++..++..
T Consensus 49 ~~~ty~el~~~~~~la~~L~~--~g~~~gd~V~i~~~~~~-~~~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ 125 (537)
T PLN02246 49 RVYTYADVELLSRRVAAGLHK--LGIRQGDVVMLLLPNCP-EFVLAFLGASRRGAVTTTANPFYTPAEIAKQAKASGAKL 125 (537)
T ss_pred ceeeHHHHHHHHHHHHHHHHH--hCCCCCCEEEEECCCCh-HHHHHHHHHHHcCEEEecCCCCCCHHHHHHHHHhcCCcE
Confidence 368999998888777665432 36788999988876653 333346778888999888765 8889999999999999
Q ss_pred EEeCcHHHHHH
Q 014951 223 FSGVPRVYDRI 233 (415)
Q Consensus 223 ~~~~P~~~~~l 233 (415)
+.........+
T Consensus 126 li~~~~~~~~~ 136 (537)
T PLN02246 126 IITQSCYVDKL 136 (537)
T ss_pred EEEccchHHHH
Confidence 88877665554
No 161
>PF00464 SHMT: Serine hydroxymethyltransferase; InterPro: IPR001085 Synonym(s): Serine hydroxymethyltransferase, Serine aldolase, Threonine aldolase Serine hydroxymethyltransferase (SHMT) is a pyridoxal phosphate (PLP) dependent enzyme and belongs to the aspartate aminotransferase superfamily (fold type I) []. The pyridoxal-P group is attached to a lysine residue around which the sequence is highly conserved in all forms of the enzyme []. The enzyme carries out interconversion of serine and glycine using PLP as the cofactor. SHMT catalyses the transfer of a hydroxymethyl group from N5, N10- methylene tetrahydrofolate to glycine, resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers and the mammalian enzyme forms a homotetramer [, ]. PLP dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalysed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis has revealed that the PLP dependent enzymes can be classified into four major groups of different evolutionary origin: aspartate aminotransferase superfamily (fold type I), tryptophan synthase beta superfamily (fold type II), alanine racemase superfamily (fold type III), D-amino acid superfamily (fold type IV) and glycogen phophorylase family (fold type V) [, ]. In vertebrates, glycine hydroxymethyltransferase exists in a cytoplasmic and a mitochondrial form whereas only one form is found in prokaryotes.; GO: 0004372 glycine hydroxymethyltransferase activity, 0006544 glycine metabolic process, 0006563 L-serine metabolic process; PDB: 3GBX_B 3H7F_A 1YJS_A 2VMW_A 2W7H_A 2W7E_A 2VMY_B 2W7L_A 2VMZ_A 2VMS_A ....
Probab=58.02 E-value=31 Score=32.51 Aligned_cols=119 Identities=12% Similarity=0.141 Sum_probs=59.3
Q ss_pred CCCCCeEEEEcCCcHhHH-----HHH----HHHHHcCCEEEecC---CCCCHHHHHHHHHhcCceEEEEcCCChh-----
Q 014951 6 VNPGDRCGIYGSNCPEWI-----IAM----EACNSQAITYVPLY---DTLGANAVEFIINHAEVSIAFVQENKIP----- 68 (415)
Q Consensus 6 v~~gd~V~l~~~n~~~~~-----~~~----lA~~~~G~~~~~l~---~~~~~~~l~~~l~~~~~~~ii~~~~~~~----- 68 (415)
++|||+|..+....=..+ ... ..-.....+..+++ -....++++.+++..+|++||++.....
T Consensus 107 l~pGD~Im~l~l~~GGHlshg~~~~~~~~~~~~~~~~~~~y~~d~~~~~ID~d~l~~~a~~~kPklIi~G~S~y~~~~d~ 186 (399)
T PF00464_consen 107 LKPGDTIMGLSLPHGGHLSHGSSVNFKKISASGLYFESVPYPVDPDTGLIDYDELEKLAKEHKPKLIICGASSYPRPIDF 186 (399)
T ss_dssp T-TT-EEEEEEGGGT--GGGT-TTSHSBSSHHHHHSEEEEEEB-TTTSSB-HHHHHHHHHHH--SEEEEE-SSTSS---H
T ss_pred HhhcCcEEecChhhcccccccccccccccccccceEEEEeeeeecCCCeECHHHHHHHHhhcCCCEEEECchhccCccCH
Confidence 478998887776542221 111 12233345566777 4567899999999999999999986543
Q ss_pred -hhhhcCccCCCCccEEEEecCCCchhhHHhhhcCceeecHHHHHhcCCCCCCCCCCCCCCeEEEEecCCCC--CCCceE
Q 014951 69 -SILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGVSCFSWEEFLQLGTLDCELPPKKKTNISTIMYTSGTT--GEPKGV 145 (415)
Q Consensus 69 -~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtT--G~pK~v 145 (415)
++.++.. ....++..| +....-++..+..+.+.+ .-| .+..|..-| |...|+
T Consensus 187 ~~~reIad----~vga~l~~D----------------~sH~~GLIa~g~~~~P~~---~AD--vvt~sThKtl~GPrggi 241 (399)
T PF00464_consen 187 KRFREIAD----EVGAYLMAD----------------ISHIAGLIAGGLFPNPFP---YAD--VVTGSTHKTLRGPRGGI 241 (399)
T ss_dssp HHHHHHHH----HTT-EEEEE-----------------TTTHHHHHTTSS--GCC---TSS--EEEEESSGGG-SSS-EE
T ss_pred HHHHHHHH----hcCcEEEec----------------ccccccceehheecCccc---cce--EEEeeccccccccCceE
Confidence 3333222 122333333 223455555553332222 112 444555555 777889
Q ss_pred Eeec
Q 014951 146 VLTN 149 (415)
Q Consensus 146 ~~th 149 (415)
.++.
T Consensus 242 I~~~ 245 (399)
T PF00464_consen 242 ILTN 245 (399)
T ss_dssp EEES
T ss_pred EEEc
Confidence 9998
No 162
>PRK05857 acyl-CoA synthetase; Validated
Probab=57.98 E-value=97 Score=30.55 Aligned_cols=95 Identities=15% Similarity=0.083 Sum_probs=69.1
Q ss_pred CCCCeEEEEecCCCCCCCceEEeecHHHHHHhhhhhhhhhhccccCCCCCEEEEeCChhhHHHHHHHHHhhhcCcEEEEe
Q 014951 125 KKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFW 204 (415)
Q Consensus 125 ~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~vv~~ 204 (415)
.++.++++.. .| ...+|...+...+..+...+.. ..+.+++++...++-.. ..+..+++++..|+..+..
T Consensus 27 ~p~~~a~~~~-~~------~~~~Ty~el~~~~~~~a~~L~~--~g~~~g~~V~i~~~~~~-e~~~~~lA~~~~G~v~v~l 96 (540)
T PRK05857 27 QPEAIALRRC-DG------TSALRYRELVAEVGGLAADLRA--QSVSRGSRVLVISDNGP-ETYLSVLACAKLGAIAVMA 96 (540)
T ss_pred CCCcEEEeec-CC------CceeeHHHHHHHHHHHHHHHHH--hCcCCCCEEEEEcCCCH-HHHHHHHHHHHcCeEEEec
Confidence 3566665432 22 1458999998888877765432 36778999988887654 3344577889999999888
Q ss_pred CC--CHHHHHHHHHhhCCeEEEeCcHH
Q 014951 205 RG--DVRYLMEDIQELKPTMFSGVPRV 229 (415)
Q Consensus 205 ~~--~~~~~~~~i~~~~~t~~~~~P~~ 229 (415)
+. ..+++.+.++..++..++..+..
T Consensus 97 ~~~~~~~~l~~~~~~~~~~~ii~~~~~ 123 (540)
T PRK05857 97 DGNLPIAAIERFCQITDPAAALVAPGS 123 (540)
T ss_pred CccCCHHHHHHHHHhcCCceEEEeccc
Confidence 66 88899999999999998887654
No 163
>PLN02654 acetate-CoA ligase
Probab=57.34 E-value=1.5e+02 Score=30.30 Aligned_cols=99 Identities=16% Similarity=0.206 Sum_probs=71.3
Q ss_pred CCCCeEEEEecCCCCCCCceEEeecHHHHHHhhhhhhhhhhccccCCCCCEEEEeCChhhHHHHHHHHHhhhcCcEEEEe
Q 014951 125 KKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFW 204 (415)
Q Consensus 125 ~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~vv~~ 204 (415)
.++.+|++ +.....+ ....+|...+...+..+...+. ..+.+++|++..++|..- -....+++++..|+..+..
T Consensus 102 ~~~~~Al~-~~~~~~~--~~~~~Ty~eL~~~v~~lA~~L~--~~Gv~~GdrV~i~~pn~~-e~v~a~lA~~~~Gav~vpv 175 (666)
T PLN02654 102 NGDKIAIY-WEGNEPG--FDASLTYSELLDRVCQLANYLK--DVGVKKGDAVVIYLPMLM-ELPIAMLACARIGAVHSVV 175 (666)
T ss_pred CCCCEEEE-EEcCCCC--ceEEEeHHHHHHHHHHHHHHHH--HcCCCCCCEEEEEcCCCH-HHHHHHHHHHHcCCEEEec
Confidence 35666654 4221111 2356899999988888776553 236789999999988754 3334577888899988877
Q ss_pred CC--CHHHHHHHHHhhCCeEEEeCcHH
Q 014951 205 RG--DVRYLMEDIQELKPTMFSGVPRV 229 (415)
Q Consensus 205 ~~--~~~~~~~~i~~~~~t~~~~~P~~ 229 (415)
.. .++.+...++..++..+++....
T Consensus 176 ~~~~~~~~l~~~l~~~~~~~li~~~~~ 202 (666)
T PLN02654 176 FAGFSAESLAQRIVDCKPKVVITCNAV 202 (666)
T ss_pred CCCCCHHHHHHHHHhcCceEEEEcCcc
Confidence 55 88999999999999999886653
No 164
>PRK13388 acyl-CoA synthetase; Provisional
Probab=57.13 E-value=1.4e+02 Score=29.52 Aligned_cols=85 Identities=9% Similarity=-0.071 Sum_probs=64.3
Q ss_pred EeecHHHHHHhhhhhhhhhhccccC-CCCCEEEEeCChhhHHHHHHHHHhhhcCcEEEEeCC--CHHHHHHHHHhhCCeE
Q 014951 146 VLTNQAIVAEVLSVDQMFVVTGKVC-SEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTM 222 (415)
Q Consensus 146 ~~th~~l~~~~~~~~~~~~~~~~~~-~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~vv~~~~--~~~~~~~~i~~~~~t~ 222 (415)
.+|...+......+...+. .... .++|++...++-... ....+++++..|+..+..+. ..+++...+++.+++.
T Consensus 26 ~lTy~el~~~~~~la~~L~--~~g~~~~~~~V~i~~~n~~~-~v~~~lA~~~~Ga~~v~l~p~~~~~~l~~~l~~~~~~~ 102 (540)
T PRK13388 26 TWTWREVLAEAAARAAALI--ALADPDRPLHVGVLLGNTPE-MLFWLAAAALGGYVLVGLNTTRRGAALAADIRRADCQL 102 (540)
T ss_pred eeeHHHHHHHHHHHHHHHH--HhcCCCCCCEEEEECCCCcH-HHHHHHHHHhCCCEEEEecccCChHHHHHHHHhcCCCE
Confidence 6899999888887766542 2245 578888888875543 33357788999999988766 7889999999999999
Q ss_pred EEeCcHHHHHH
Q 014951 223 FSGVPRVYDRI 233 (415)
Q Consensus 223 ~~~~P~~~~~l 233 (415)
++........+
T Consensus 103 ~i~~~~~~~~~ 113 (540)
T PRK13388 103 LVTDAEHRPLL 113 (540)
T ss_pred EEEChhhhHHH
Confidence 99877665443
No 165
>KOG1177 consensus Long chain fatty acid acyl-CoA ligase [Lipid transport and metabolism]
Probab=57.02 E-value=64 Score=31.00 Aligned_cols=85 Identities=15% Similarity=0.075 Sum_probs=61.0
Q ss_pred eEEeecHHHHHHhhhhhhhhhhccccCCCCCEEEEeCChhhHHHHHHHHHhhhcCcEEEEeCC--CHHHHHHHHHhhCCe
Q 014951 144 GVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG--DVRYLMEDIQELKPT 221 (415)
Q Consensus 144 ~v~~th~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~vv~~~~--~~~~~~~~i~~~~~t 221 (415)
++..|...+...+..+..- +-..++.++|++..|.|-+.- ...+.+++..+|..++..-+ ...++.-.+++.++.
T Consensus 75 g~R~Tf~~~~~ev~slAaG--ll~lGL~kGDrVgvwgpN~~~-w~l~~lA~A~AG~v~v~~NP~Yq~~elr~~L~k~~~k 151 (596)
T KOG1177|consen 75 GIRLTFSEFVSEVESLAAG--LLSLGLKKGDRVGVWGPNSYE-WVLCQLACARAGLVLVNLNPAYQSEELRYVLKKVGCK 151 (596)
T ss_pred cchhhHHHHHHHHHHHHhh--HHhhcCCCCCEEEEecCChHH-HHHHHHHHHHhceEEeccCcccccHHHHHHHhhcCeE
Confidence 4457777788777766553 344589999999999887632 22346677777877777654 566777788999999
Q ss_pred EEEeCcHHHH
Q 014951 222 MFSGVPRVYD 231 (415)
Q Consensus 222 ~~~~~P~~~~ 231 (415)
.++..|.+..
T Consensus 152 ~l~~p~~~k~ 161 (596)
T KOG1177|consen 152 ALFAPPQFKT 161 (596)
T ss_pred EEEccchhhh
Confidence 9998886543
No 166
>PRK06155 crotonobetaine/carnitine-CoA ligase; Provisional
Probab=56.61 E-value=90 Score=30.83 Aligned_cols=86 Identities=6% Similarity=-0.085 Sum_probs=67.1
Q ss_pred EeecHHHHHHhhhhhhhhhhccccCCCCCEEEEeCChhhHHHHHHHHHhhhcCcEEEEeCC--CHHHHHHHHHhhCCeEE
Q 014951 146 VLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTMF 223 (415)
Q Consensus 146 ~~th~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~vv~~~~--~~~~~~~~i~~~~~t~~ 223 (415)
.+|...+...+..+...+. ..++.+++++..+.|-.... ...+++++..|+..+.... ...++...+++.+++.+
T Consensus 46 ~~Ty~el~~~v~~la~~L~--~~gi~~g~~V~v~~~n~~~~-~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~l 122 (542)
T PRK06155 46 RWTYAEAARAAAAAAHALA--AAGVKRGDRVALMCGNRIEF-LDVFLGCAWLGAIAVPINTALRGPQLEHILRNSGARLL 122 (542)
T ss_pred cccHHHHHHHHHHHHHHHH--HcCCCCCCEEEEECCCChHH-HHHHHHHHHhCCEEEEeccccCHHHHHHHHHhcCceEE
Confidence 5888888888877766542 23678899998887766433 4457888999999988876 88999999999999999
Q ss_pred EeCcHHHHHHH
Q 014951 224 SGVPRVYDRIY 234 (415)
Q Consensus 224 ~~~P~~~~~l~ 234 (415)
+..+..+..+.
T Consensus 123 ~~~~~~~~~~~ 133 (542)
T PRK06155 123 VVEAALLAALE 133 (542)
T ss_pred EEChhhHHHHH
Confidence 99887766553
No 167
>TIGR02379 ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase. This family consists of TDP-4-keto-6-deoxy-D-glucose transaminases, the WecE (formerly RffA) protein of enterobacterial common antigen (ECA) biosynthesis, from enterobacteria. It also includes closely matching sequence from species not expected to make ECA, but which contain other genes for the biosynthesis of TDP-4-keto-6-deoxy-D-Glc, an intermediate in the biosynthesis of other compounds as well and the substrate of WecA. This family belongs to the DegT/DnrJ/EryC1/StrS aminotransferase family (pfam01041).
Probab=56.51 E-value=22 Score=33.31 Aligned_cols=56 Identities=14% Similarity=0.148 Sum_probs=36.5
Q ss_pred CCCCCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCCC-----CCHHHHHHHHHhcCceEEEEc
Q 014951 4 RGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDT-----LGANAVEFIINHAEVSIAFVQ 63 (415)
Q Consensus 4 ~Gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~~-----~~~~~l~~~l~~~~~~~ii~~ 63 (415)
.++++||.|.+-.+. +.....++...|+.++.++.. .+.+.+...+.. +.++|+..
T Consensus 66 l~~~pGd~Viv~~~t---~~~~~~~~~~~G~~~v~vd~d~~~~~~d~~~le~~i~~-~tk~Iip~ 126 (376)
T TIGR02379 66 LDIQPGDEVIMPSYT---FVSTANAFVLRGAKIVFVDIRPDTMNIDETLIESAITH-RTKAIVPV 126 (376)
T ss_pred cCCCCcCEEEECCCC---cHHHHHHHHHcCCEEEEEecCCCcCCCCHHHHHHhcCc-CceEEEEe
Confidence 478899998875543 444455667888888776532 456667776643 56666644
No 168
>PLN02565 cysteine synthase
Probab=56.36 E-value=47 Score=30.34 Aligned_cols=62 Identities=10% Similarity=0.061 Sum_probs=47.9
Q ss_pred CCC-CCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEcCC
Q 014951 4 RGV-NPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQEN 65 (415)
Q Consensus 4 ~Gv-~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~ii~~~~ 65 (415)
.|. .+|....+....+-.-+...++|..+|..+..+-|...+......++..++++++++..
T Consensus 60 ~g~~~~g~~~vv~aSsGN~g~alA~~a~~~G~~~~ivvp~~~~~~k~~~i~~~GA~V~~~~~~ 122 (322)
T PLN02565 60 KGLIKPGESVLIEPTSGNTGIGLAFMAAAKGYKLIITMPASMSLERRIILLAFGAELVLTDPA 122 (322)
T ss_pred cCCCCCCCcEEEEECCChHHHHHHHHHHHcCCeEEEEeCCCCcHHHHHHHHHcCCEEEEeCCC
Confidence 454 78866445555555566667788889999998888888888889999999999999864
No 169
>PRK07514 malonyl-CoA synthase; Validated
Probab=55.64 E-value=1.7e+02 Score=28.35 Aligned_cols=86 Identities=10% Similarity=0.030 Sum_probs=65.5
Q ss_pred EEeecHHHHHHhhhhhhhhhhccccCCCCCEEEEeCChhhHHHHHHHHHhhhcCcEEEEeCC--CHHHHHHHHHhhCCeE
Q 014951 145 VVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTM 222 (415)
Q Consensus 145 v~~th~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~vv~~~~--~~~~~~~~i~~~~~t~ 222 (415)
..+|...+...+..+...+. ...+.++|++....+-.. -.....++++..|+..+.... ...++...++..+++.
T Consensus 27 ~~~Ty~eL~~~~~~la~~L~--~~g~~~gd~v~i~~~~~~-e~~v~~la~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~ 103 (504)
T PRK07514 27 LRYTYGDLDAASARLANLLV--ALGVKPGDRVAVQVEKSP-EALALYLATLRAGAVFLPLNTAYTLAELDYFIGDAEPAL 103 (504)
T ss_pred CEEcHHHHHHHHHHHHHHHH--HcCCCCCCEEEEECCCCH-HHHHHHHHHHHcCcEEEECCCCCCHHHHHHHHHhCCCcE
Confidence 47888888887777766542 236788999988877663 333456788899999887765 7889999999999999
Q ss_pred EEeCcHHHHHH
Q 014951 223 FSGVPRVYDRI 233 (415)
Q Consensus 223 ~~~~P~~~~~l 233 (415)
+...+.....+
T Consensus 104 ii~~~~~~~~~ 114 (504)
T PRK07514 104 VVCDPANFAWL 114 (504)
T ss_pred EEEccchhHHH
Confidence 98888766554
No 170
>PF01041 DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransferase family; InterPro: IPR000653 This entry represents a family that are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions. The family includes StsA P72454 from SWISSPROT, StsC P77952 from SWISSPROT and StsS []. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase 2.6.1.50 from EC, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin [].; PDB: 2FNI_A 2FNU_A 2FN6_A 2PO3_A 3UWC_A 1O61_B 1O62_B 1O69_B 1B9I_A 1B9H_A ....
Probab=55.25 E-value=14 Score=34.41 Aligned_cols=58 Identities=19% Similarity=0.150 Sum_probs=39.3
Q ss_pred ccCCCCCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCC-----CCCHHHHHHHHHhcCceEEEEc
Q 014951 2 RSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYD-----TLGANAVEFIINHAEVSIAFVQ 63 (415)
Q Consensus 2 ~~~Gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~-----~~~~~~l~~~l~~~~~~~ii~~ 63 (415)
...|+++||.|++-.- -+..+.-|+...|+.++.++- .++++.+...+..-. ++|+..
T Consensus 58 ~~l~~~~gdeVi~p~~---t~~~~~~ai~~~G~~pv~~Di~~~~~~id~~~~~~~i~~~t-~ai~~~ 120 (363)
T PF01041_consen 58 RALGLGPGDEVIVPAY---TFPATASAILWAGAEPVFVDIDPETLNIDPEALEKAITPKT-KAILVV 120 (363)
T ss_dssp HHTTGGTTSEEEEESS---S-THHHHHHHHTT-EEEEE-BETTTSSB-HHHHHHHHHTTE-EEEEEE
T ss_pred HhcCCCcCceEecCCC---cchHHHHHHHHhccEEEEEeccCCcCCcCHHHHHHHhccCc-cEEEEe
Confidence 4579999999988644 455567789999999998753 467888888876444 555543
No 171
>PRK11706 TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional
Probab=55.06 E-value=24 Score=32.97 Aligned_cols=56 Identities=13% Similarity=0.061 Sum_probs=35.8
Q ss_pred CCCCCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCC-----CCCHHHHHHHHHhcCceEEEEc
Q 014951 4 RGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYD-----TLGANAVEFIINHAEVSIAFVQ 63 (415)
Q Consensus 4 ~Gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~-----~~~~~~l~~~l~~~~~~~ii~~ 63 (415)
.++++||.|.+-.+..+ ....++...|+.++.++. ..+.++++..+.. +.++|+..
T Consensus 66 ~~~~~Gd~Viv~~~t~~---~~~~~~~~~G~~~v~~d~d~~~~~~d~~~le~~i~~-~tk~i~~~ 126 (375)
T PRK11706 66 LDIQPGDEVIMPSYTFV---STANAFVLRGAKIVFVDIRPDTMNIDETLIEAAITP-KTRAIVPV 126 (375)
T ss_pred hCCCCCCEEEECCCCcH---HHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHhcCC-CCeEEEEe
Confidence 46788998877655444 334556777888777643 2456777776654 56666543
No 172
>PLN02574 4-coumarate--CoA ligase-like
Probab=54.73 E-value=1.2e+02 Score=30.01 Aligned_cols=86 Identities=10% Similarity=0.084 Sum_probs=64.4
Q ss_pred EeecHHHHHHhhhhhhhhhhccccCCCCCEEEEeCChhhHHHHHHHHHhhhcCcEEEEeCC--CHHHHHHHHHhhCCeEE
Q 014951 146 VLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTMF 223 (415)
Q Consensus 146 ~~th~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~vv~~~~--~~~~~~~~i~~~~~t~~ 223 (415)
.+|...+......+...+.. ..++.++|++..+.+-.. .....+++++..|+..+.... ...++...++..++..+
T Consensus 66 ~~Ty~el~~~~~~lA~~L~~-~~G~~~gd~V~i~~~n~~-~~~~~~la~~~~G~v~v~l~p~~~~~~l~~~l~~~~~~~~ 143 (560)
T PLN02574 66 SISYSELQPLVKSMAAGLYH-VMGVRQGDVVLLLLPNSV-YFPVIFLAVLSLGGIVTTMNPSSSLGEIKKRVVDCSVGLA 143 (560)
T ss_pred cccHHHHHHHHHHHHHHHHH-HhCCCCCCEEEEECCCcc-hHHHHHHHHHHhCeEEeCcCcccCHHHHHHHHHhcCCEEE
Confidence 46888888877777665422 026788999999887553 334456788889999888765 78899999999999999
Q ss_pred EeCcHHHHHH
Q 014951 224 SGVPRVYDRI 233 (415)
Q Consensus 224 ~~~P~~~~~l 233 (415)
+..+.....+
T Consensus 144 ~~~~~~~~~~ 153 (560)
T PLN02574 144 FTSPENVEKL 153 (560)
T ss_pred EECHHHHHHH
Confidence 8888766554
No 173
>TIGR01733 AA-adenyl-dom amino acid adenylation domain. This domain is a subset of the AMP-binding domain found in Pfam (pfam00501) which also hits substrate--CoA ligases and luciferases. Sequences scoring in between trusted and noise for this model may be ambiguous as to whether they activate amino acids or other molecules lacking an alpha amino group.
Probab=54.39 E-value=76 Score=29.68 Aligned_cols=64 Identities=8% Similarity=-0.027 Sum_probs=51.4
Q ss_pred cCCCCCEEEEeCChhhHHHHHHHHHhhhcCcEEEEeCC--CHHHHHHHHHhhCCeEEEeCcHHHHHH
Q 014951 169 VCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTMFSGVPRVYDRI 233 (415)
Q Consensus 169 ~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~vv~~~~--~~~~~~~~i~~~~~t~~~~~P~~~~~l 233 (415)
....+|++..+.|-.. ......++++..|+.++.... ....+...+++.+++.+...+.....+
T Consensus 21 g~~~gd~v~l~~~n~~-~~~~~~~a~~~~G~~~v~~~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~ 86 (408)
T TIGR01733 21 GVGPGDRVAVLLERSA-ELVVAILAVLKAGAAYVPLDPAYPAERLAFILEDAGARLLLTDSALASRL 86 (408)
T ss_pred CCCCCCEEEEEeCCCH-HHHHHHHHHHHhCCEEEEcCCCCCHHHHHHHHHhcCCCEEEEcCchhhhc
Confidence 4778999998888773 334457788999999988876 888999999999999999988766544
No 174
>TIGR01217 ac_ac_CoA_syn acetoacetyl-CoA synthase. This enzyme catalyzes the first step of the mevalonate pathway of IPP biosynthesis. Most bacteria do not use this pathway, but rather the deoxyxylulose pathway.
Probab=53.97 E-value=1.7e+02 Score=29.85 Aligned_cols=95 Identities=15% Similarity=0.125 Sum_probs=69.8
Q ss_pred CCeEEEEecCCCCCCCceEEeecHHHHHHhhhhhhhhhhccccCCCCCEEEEeCChhhHHHHHHHHHhhhcCcEEEEeCC
Q 014951 127 TNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG 206 (415)
Q Consensus 127 ~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~vv~~~~ 206 (415)
++++++.... +|. ...+|...+...+..+...+. ..++.++|++...+|..- -....+++++..|+..+....
T Consensus 99 ~~~a~~~~~~--~~~--~~~~Ty~eL~~~v~~lA~~L~--~~Gv~~GdrV~i~~~n~~-e~~~~~lA~~~~Gav~vp~~~ 171 (652)
T TIGR01217 99 TEPALLYVDE--THE--PAPVTWAELRRQVASLAAALR--ALGVRPGDRVSGYLPNIP-QAVVAMLATASVGAIWSSCSP 171 (652)
T ss_pred CCeEEEEECC--CCC--eeEEeHHHHHHHHHHHHHHHH--HcCCCCCCEEEEEcCCCH-HHHHHHHHHHHhCeEEEecCC
Confidence 5566544322 222 346899999998888877653 337889999999998863 334457788888988877765
Q ss_pred --CHHHHHHHHHhhCCeEEEeCcH
Q 014951 207 --DVRYLMEDIQELKPTMFSGVPR 228 (415)
Q Consensus 207 --~~~~~~~~i~~~~~t~~~~~P~ 228 (415)
.++++...+++.++..+++...
T Consensus 172 ~~~~~~l~~~l~~~~~k~li~~~~ 195 (652)
T TIGR01217 172 DFGARGVLDRFQQIEPKLLFTVDG 195 (652)
T ss_pred CCCHHHHHHHHHhcCCcEEEEccc
Confidence 8899999999999999887654
No 175
>COG0365 Acs Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases [Lipid metabolism]
Probab=53.52 E-value=1.4e+02 Score=29.47 Aligned_cols=97 Identities=12% Similarity=0.086 Sum_probs=69.8
Q ss_pred EEEEecCCCCCCCceEEeecHHHHHHhhhhhhhhhhccccCCCCCEEEEeCChhhHHHHHHHHHhhhcCcEEEEeC--CC
Q 014951 130 STIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWR--GD 207 (415)
Q Consensus 130 ~~i~~TSGtTG~pK~v~~th~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~vv~~~--~~ 207 (415)
..++|-+-.++. -.+|.+.+......+.+.+... ... ++|+++.++|+.-- ....+++++..|+--..+- ..
T Consensus 27 ~aii~~~e~~~~---~~~Ty~~L~~~v~r~A~~L~~~-~gv-kGDrV~iymp~~pe-~~~a~LA~~riGAI~~~vf~~f~ 100 (528)
T COG0365 27 TAIIFDGEDGLF---RELTYGDLRREVARLANALKDL-GGV-KGDRVAIYMPNSPE-AVIALLATARIGAIPAVVSPGLS 100 (528)
T ss_pred eEEEEEcCCCCc---eEEEHHHHHHHHHHHHHHHHHh-CCC-CCCEEEEEcCCCHH-HHHHHHHHHHcCCEEeecccCCC
Confidence 445666555444 6889999998888877766322 234 99999999998742 2335677788887654443 39
Q ss_pred HHHHHHHHHhhCCeEEEeCcHHHHH
Q 014951 208 VRYLMEDIQELKPTMFSGVPRVYDR 232 (415)
Q Consensus 208 ~~~~~~~i~~~~~t~~~~~P~~~~~ 232 (415)
+..+...|...++.++.+....++.
T Consensus 101 ~~al~~Ri~d~~~k~vit~d~~~~~ 125 (528)
T COG0365 101 AEAVADRIADLGPKVLIADDGTFRN 125 (528)
T ss_pred HHHHHHHHHccCCCEEEEecccccc
Confidence 9999999999999998877666553
No 176
>TIGR03335 F390_ftsA coenzyme F390 synthetase. This enzyme, characterized in Methanobacterium thermoautotrophicum and found in several other methanogens, modifies coenzyme F420 by ligation of AMP (or GMP) from ATP (or GTP). On F420, it activates an aromatic hydroxyl group, which is unusual chemistry for an adenylyltransferase. This enzyme name has been attached to numbers of uncharacterized genes likely to instead act as phenylacetate CoA ligase, based on proximity to predicted indolepyruvate ferredoxin oxidoreductase (1.2.7.8) genes. The enzyme acts during transient exposure of the organism to oxygen.
Probab=53.19 E-value=36 Score=32.78 Aligned_cols=62 Identities=19% Similarity=0.094 Sum_probs=45.2
Q ss_pred cCCCCCCCeEEEEcCCcHh--HHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEcCCCh
Q 014951 3 SRGVNPGDRCGIYGSNCPE--WIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKI 67 (415)
Q Consensus 3 ~~Gv~~gd~V~l~~~n~~~--~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~ 67 (415)
..|+++||++.++.+.+.. .....+++..+|+.+++... .+....+++..++.+++......
T Consensus 124 ~~G~~~gD~vl~~~~~~~~~g~~~~~~~~~~~Ga~vi~~~~---~~~~~~~i~~~~~t~l~~~ps~l 187 (445)
T TIGR03335 124 SQGFTAGDRMVICASYGMNVGANTMTLAAREVGMSIIPEGK---CTFPIRIIESYRPTGIVASVFKL 187 (445)
T ss_pred HcCCCCCCeEEEEecCCcchhHHHHHHHHHHcCCEEEcCCc---hhHHHHHHHHhCCCEEEECHHHH
Confidence 3599999999998876542 23456788999998887653 23456778899999988766543
No 177
>PRK09088 acyl-CoA synthetase; Validated
Probab=52.60 E-value=1.8e+02 Score=28.14 Aligned_cols=80 Identities=13% Similarity=0.067 Sum_probs=61.4
Q ss_pred EeecHHHHHHhhhhhhhhhhccccCCCCCEEEEeCChhhHHHHHHHHHhhhcCcEEEEeCC--CHHHHHHHHHhhCCeEE
Q 014951 146 VLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTMF 223 (415)
Q Consensus 146 ~~th~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~vv~~~~--~~~~~~~~i~~~~~t~~ 223 (415)
.+|...+...+..+...+. ..++.++|++..+++-... .+...++++..|+..+.... .+.++...+++.+++.+
T Consensus 22 ~~ty~~l~~~v~~~a~~l~--~~g~~~~~~v~i~~~~~~~-~~~~~la~~~~G~~~v~~~~~~~~~~~~~~~~~~~~~~i 98 (488)
T PRK09088 22 RWTYAELDALVGRLAAVLR--RRGCVDGERLAVLARNSVW-LVALHFACARVGAIYVPLNWRLSASELDALLQDAEPRLL 98 (488)
T ss_pred EEEHHHHHHHHHHHHHHHH--HcCCCCCCEEEEECCCCHH-HHHHHHHHHHcCeEEEeeCccCCHHHHHHHHHhCCCCEE
Confidence 5899999888877766553 2257788999888777653 33346788899999888765 78899999999999998
Q ss_pred EeCcH
Q 014951 224 SGVPR 228 (415)
Q Consensus 224 ~~~P~ 228 (415)
+....
T Consensus 99 i~~~~ 103 (488)
T PRK09088 99 LGDDA 103 (488)
T ss_pred EEcch
Confidence 87653
No 178
>PRK06839 acyl-CoA synthetase; Validated
Probab=52.53 E-value=2.1e+02 Score=27.65 Aligned_cols=88 Identities=7% Similarity=-0.073 Sum_probs=65.7
Q ss_pred eEEeecHHHHHHhhhhhhhhhhccccCCCCCEEEEeCChhhHHHHHHHHHhhhcCcEEEEeCC--CHHHHHHHHHhhCCe
Q 014951 144 GVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG--DVRYLMEDIQELKPT 221 (415)
Q Consensus 144 ~v~~th~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~vv~~~~--~~~~~~~~i~~~~~t 221 (415)
...+|+..+......+...+.. ..++.+++++...++-... ....+++++..|+..+..+. ++..+...+++.+++
T Consensus 25 ~~~~ty~~l~~~~~~la~~L~~-~~g~~~~~~V~i~~~~~~~-~~~~~la~~~~G~~~~~~~~~~~~~~~~~~l~~~~~~ 102 (496)
T PRK06839 25 EEEMTYKQLHEYVSKVAAYLIY-ELNVKKGERIAILSQNSLE-YIVLLFAIAKVECIAVPLNIRLTENELIFQLKDSGTT 102 (496)
T ss_pred CceEEHHHHHHHHHHHHHHHHH-hcCCCCCCEEEEECCCCHH-HHHHHHHHHhcCcEEEecCcccCHHHHHHHHHhcCce
Confidence 3578999998888777655421 1256788998888776632 33457778888999888765 888889999999999
Q ss_pred EEEeCcHHHHHH
Q 014951 222 MFSGVPRVYDRI 233 (415)
Q Consensus 222 ~~~~~P~~~~~l 233 (415)
.++..+.....+
T Consensus 103 ~i~~~~~~~~~~ 114 (496)
T PRK06839 103 VLFVEKTFQNMA 114 (496)
T ss_pred EEEEcHHHHHHH
Confidence 999888766554
No 179
>COG0318 CaiC Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=52.06 E-value=2.2e+02 Score=28.19 Aligned_cols=93 Identities=12% Similarity=0.013 Sum_probs=69.1
Q ss_pred CCCeEEEEecCCCCCCCceEEeecHHHHHHhhhhhhhhhhccccCCCCCEEEEeCChhhHHHHHHHHHhhhcCcEEEEeC
Q 014951 126 KTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWR 205 (415)
Q Consensus 126 ~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~vv~~~ 205 (415)
++.++.+...-+. .+|++.+...+..+...+... ...++|++...+|-+. -.+..+++++..|+..+...
T Consensus 25 ~~~~a~~~~~~~~-------~~Ty~el~~~~~~~A~~L~~~--~v~~gdrVail~~N~~-e~~~~~~a~~~~Gav~vpln 94 (534)
T COG0318 25 PDRPALIFLGRGG-------RLTYRELDRRANRLAAALQAL--GVKPGDRVAILLPNSP-EFLIAFLAALRAGAVAVPLN 94 (534)
T ss_pred CCceEEEEcCCCc-------eeeHHHHHHHHHHHHHHHHHc--CCCCCCEEEEECCCCH-HHHHHHHHHHhcCEEEeecC
Confidence 4555555443332 899999999998887766433 2678999888887653 23345677888999999887
Q ss_pred C--CHHHHHHHHHhhCCeEEEeCcH
Q 014951 206 G--DVRYLMEDIQELKPTMFSGVPR 228 (415)
Q Consensus 206 ~--~~~~~~~~i~~~~~t~~~~~P~ 228 (415)
. .+.++...++..++..++....
T Consensus 95 ~~~~~~~l~~~l~~~~~~~~~~~~~ 119 (534)
T COG0318 95 PRLTPRELAYILNDAGAKVLITSAE 119 (534)
T ss_pred cccCHHHHHHHHHhcCCeEEEEccc
Confidence 6 7888999999989999888766
No 180
>PRK04319 acetyl-CoA synthetase; Provisional
Probab=51.77 E-value=1.6e+02 Score=29.17 Aligned_cols=86 Identities=10% Similarity=0.106 Sum_probs=65.6
Q ss_pred EEeecHHHHHHhhhhhhhhhhccccCCCCCEEEEeCChhhHHHHHHHHHhhhcCcEEEEeCC--CHHHHHHHHHhhCCeE
Q 014951 145 VVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTM 222 (415)
Q Consensus 145 v~~th~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~vv~~~~--~~~~~~~~i~~~~~t~ 222 (415)
..+|...+...+..+...+. ...+.++|++...++-.. -....+++++..|+.++.... .+.++...++..+++.
T Consensus 72 ~~~Ty~el~~~v~~~A~~L~--~~gv~~gd~V~i~~~n~~-~~~~~~la~~~~G~v~vpl~~~~~~~~l~~~l~~~~~~~ 148 (570)
T PRK04319 72 EKYTYKELKELSNKFANVLK--ELGVEKGDRVFIFMPRIP-ELYFALLGALKNGAIVGPLFEAFMEEAVRDRLEDSEAKV 148 (570)
T ss_pred eeecHHHHHHHHHHHHHHHH--HhCCCCCCEEEEECCCCH-HHHHHHHHHHHcCcEEcccccccCHHHHHHHHHccCCcE
Confidence 46899999888877766543 236788999988888654 233456788889999887765 8899999999999999
Q ss_pred EEeCcHHHHHH
Q 014951 223 FSGVPRVYDRI 233 (415)
Q Consensus 223 ~~~~P~~~~~l 233 (415)
+...+..+...
T Consensus 149 ii~~~~~~~~~ 159 (570)
T PRK04319 149 LITTPALLERK 159 (570)
T ss_pred EEEChhhhhcc
Confidence 99887765543
No 181
>PRK05850 acyl-CoA synthetase; Validated
Probab=50.94 E-value=2.1e+02 Score=28.43 Aligned_cols=87 Identities=13% Similarity=0.041 Sum_probs=65.5
Q ss_pred EEeecHHHHHHhhhhhhhhhhccccCCCCCEEEEeCChhhHHHHHHHHHhhhcCcEEEEeCC-----CHHHHHHHHHhhC
Q 014951 145 VVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG-----DVRYLMEDIQELK 219 (415)
Q Consensus 145 v~~th~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~vv~~~~-----~~~~~~~~i~~~~ 219 (415)
..+|+..+...+..+...+... . .++|++...++-.. -.....++++..|+.++..+. ..+++...++..+
T Consensus 34 ~~lty~eL~~~v~~~A~~L~~~--g-~~gd~V~l~~~n~~-~~~~~~lA~~~~G~v~vpl~~~~~~~~~~~l~~~l~~~~ 109 (578)
T PRK05850 34 ETLTWSQLYRRTLNVAEELRRH--G-STGDRAVILAPQGL-EYIVAFLGALQAGLIAVPLSVPQGGAHDERVSAVLRDTS 109 (578)
T ss_pred eeecHHHHHHHHHHHHHHHHHh--C-CCCCEEEEEcCCcc-cHHHHHHHHHHcCceEEecCCCCccchHHHHHHHHHhcC
Confidence 5689999988887776665322 2 46899888888653 334457788999999888753 5678999999999
Q ss_pred CeEEEeCcHHHHHHHH
Q 014951 220 PTMFSGVPRVYDRIYT 235 (415)
Q Consensus 220 ~t~~~~~P~~~~~l~~ 235 (415)
+..++..+.....+..
T Consensus 110 ~~~il~~~~~~~~~~~ 125 (578)
T PRK05850 110 PSVVLTTSAVVDDVTE 125 (578)
T ss_pred CCEEEEcHHHHHHHHH
Confidence 9999998877766543
No 182
>TIGR02316 propion_prpE propionate--CoA ligase. This family contains one of three readily separable clades of proteins in the group of acetate and propionate--CoA ligases. Characterized members of this family act on propionate. From propionyl-CoA, there is a cyclic degradation pathway: it is ligated by PrpC to the TCA cycle intermediate oxaloacetate, acted upon further by PrpD and an aconitase, then cleaved by PrpB to pyruvate and the TCA cycle intermediate succinate.
Probab=50.93 E-value=2.2e+02 Score=28.73 Aligned_cols=98 Identities=15% Similarity=0.205 Sum_probs=70.7
Q ss_pred CCCCeEEEEecCCCCCCCceEEeecHHHHHHhhhhhhhhhhccccCCCCCEEEEeCChhhHHHHHHHHHhhhcCcEEEEe
Q 014951 125 KKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFW 204 (415)
Q Consensus 125 ~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~vv~~ 204 (415)
.++.+|++ +-+..+|. .-.+|...+...+..+...+. ..++.++|++...+|..- -....+++++..|+..+..
T Consensus 65 ~p~~~Al~-~~~~~~~~--~~~~Ty~eL~~~v~~lA~~L~--~~Gv~~Gd~V~i~~~n~~-e~v~~~lA~~~~Gav~vpl 138 (628)
T TIGR02316 65 RGEQLALV-TVSSETGQ--ERTLTYRQLHREVNVFASALR--ALGVGRGDRVLIYMPMIA-EAVFAMLACARIGAIHSVV 138 (628)
T ss_pred CCCCeEEE-EEcCCCCc--eEEEeHHHHHHHHHHHHHHHH--HcCCCCCCEEEEEcCCCH-HHHHHHHHHHHhCCEEEec
Confidence 35667754 43322232 246899999988887776553 337889999999998763 3334577888899988776
Q ss_pred CC--CHHHHHHHHHhhCCeEEEeCcH
Q 014951 205 RG--DVRYLMEDIQELKPTMFSGVPR 228 (415)
Q Consensus 205 ~~--~~~~~~~~i~~~~~t~~~~~P~ 228 (415)
.. .+.++...++..++..+++...
T Consensus 139 ~~~~~~~~l~~~l~~~~~~~li~~~~ 164 (628)
T TIGR02316 139 FGGFASHSLALRIDDATPKLIVSADA 164 (628)
T ss_pred CCCCCHHHHHHHHHhcCceEEEECCc
Confidence 54 8899999999999999887643
No 183
>COG0399 WecE Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=50.76 E-value=32 Score=32.02 Aligned_cols=58 Identities=12% Similarity=0.090 Sum_probs=43.8
Q ss_pred ccCCCCCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCC-----CCCHHHHHHHHHhcCceEEEEc
Q 014951 2 RSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYD-----TLGANAVEFIINHAEVSIAFVQ 63 (415)
Q Consensus 2 ~~~Gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~-----~~~~~~l~~~l~~~~~~~ii~~ 63 (415)
+..||+|||-|.+ .+.-|+...=++...|+.++.+|- +++++.++..+... .|+||.-
T Consensus 67 ~al~ig~GDeVI~---ps~TfvATan~i~~~Ga~PVFvDid~~T~nid~~~ie~aIt~~-tKAIipV 129 (374)
T COG0399 67 LALAIGPGDEVIV---PSFTFVATANAVLLVGAKPVFVDIDPDTLNIDPDLIEAAITPR-TKAIIPV 129 (374)
T ss_pred HhcCCCCCCEEEe---cCCchHHHHHHHHHcCCeEEEEecCCcccCCCHHHHHHHcccC-CeEEEEe
Confidence 4568999996544 366788888899999999998753 47788888888765 6666643
No 184
>PRK03640 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=50.18 E-value=2.4e+02 Score=27.08 Aligned_cols=85 Identities=8% Similarity=-0.023 Sum_probs=64.8
Q ss_pred EEeecHHHHHHhhhhhhhhhhccccCCCCCEEEEeCChhhHHHHHHHHHhhhcCcEEEEeCC--CHHHHHHHHHhhCCeE
Q 014951 145 VVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTM 222 (415)
Q Consensus 145 v~~th~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~vv~~~~--~~~~~~~~i~~~~~t~ 222 (415)
-.+|+..+...+..+...+.. ..+.++|++..+.|-... ....+++++..|+..+..+. .+.++...+++.++..
T Consensus 26 ~~~Ty~el~~~~~~~a~~L~~--~g~~~~~~v~i~~~~~~~-~~~~~la~~~~G~~~v~i~~~~~~~~~~~~~~~~~~~~ 102 (483)
T PRK03640 26 KKVTFMELHEAVVSVAGKLAA--LGVKKGDRVALLMKNGME-MILVIHALQQLGAVAVLLNTRLSREELLWQLDDAEVKC 102 (483)
T ss_pred eeeeHHHHHHHHHHHHHHHHH--cCCCCCCEEEEECCCCHH-HHHHHHHHHhCCcEEEecCcCCCHHHHHHHHHhCCCCE
Confidence 368999998888877665532 257789999988877654 34457788999999998876 8889999999999998
Q ss_pred EEeCcHHHHH
Q 014951 223 FSGVPRVYDR 232 (415)
Q Consensus 223 ~~~~P~~~~~ 232 (415)
+.........
T Consensus 103 vi~~~~~~~~ 112 (483)
T PRK03640 103 LITDDDFEAK 112 (483)
T ss_pred EEEcchhhHH
Confidence 8876654443
No 185
>PRK07798 acyl-CoA synthetase; Validated
Probab=50.09 E-value=2.2e+02 Score=27.71 Aligned_cols=87 Identities=6% Similarity=-0.166 Sum_probs=63.9
Q ss_pred EEeecHHHHHHhhhhhhhhhhccccCCCCCEEEEeCChhhHHHHHHHHHhhhcCcEEEEeCC--CHHHHHHHHHhhCCeE
Q 014951 145 VVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTM 222 (415)
Q Consensus 145 v~~th~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~vv~~~~--~~~~~~~~i~~~~~t~ 222 (415)
-.+|...+...+..+...+. ..++.++|++..+.+-.- -.....++++..|+..+..+. ...++...+++.++..
T Consensus 27 ~~~ty~el~~~~~~la~~L~--~~g~~~~~~v~v~~~n~~-~~~~~~~a~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ 103 (533)
T PRK07798 27 RRLTYAELEERANRLAHYLI--AQGLGPGDHVGIYARNRI-EYVEAMLGAFKARAVPVNVNYRYVEDELRYLLDDSDAVA 103 (533)
T ss_pred ceeeHHHHHHHHHHHHHHHH--HcCCCCCCEEEEEcCCCH-HHHHHHHHHHhcCeEEEecCcCCCHHHHHHHHhhcCCCE
Confidence 36888888888877766542 235678898888765442 223346777888999888766 7889999999999999
Q ss_pred EEeCcHHHHHHH
Q 014951 223 FSGVPRVYDRIY 234 (415)
Q Consensus 223 ~~~~P~~~~~l~ 234 (415)
++........+.
T Consensus 104 ~~~~~~~~~~~~ 115 (533)
T PRK07798 104 LVYEREFAPRVA 115 (533)
T ss_pred EEEchhhHHHHH
Confidence 988776655543
No 186
>PRK08008 caiC putative crotonobetaine/carnitine-CoA ligase; Validated
Probab=49.97 E-value=2.4e+02 Score=27.50 Aligned_cols=102 Identities=10% Similarity=-0.033 Sum_probs=70.4
Q ss_pred CCCCeEEEEecCCCCCCCceEEeecHHHHHHhhhhhhhhhhccccCCCCCEEEEeCChhhHHHHHHHHHhhhcCcEEEEe
Q 014951 125 KKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFW 204 (415)
Q Consensus 125 ~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~vv~~ 204 (415)
.++.++++.-.. .+. .-.+|...+...+..+...+. ..++..+|++..+.+-.... ....++++..|+.++..
T Consensus 20 ~p~~~a~~~~~~--~~~--~~~~ty~~l~~~v~~la~~L~--~~g~~~~~~v~i~~~n~~~~-~~~~la~~~~G~~~v~l 92 (517)
T PRK08008 20 YGHKTALIFESS--GGV--VRRYSYLELNEEINRTANLFY--SLGIRKGDKVALHLDNCPEF-IFCWFGLAKIGAIMVPI 92 (517)
T ss_pred CCCceEEEcccC--CCc--cceeeHHHHHHHHHHHHHHHH--HcCCCCCCEEEEEcCCCHHH-HHHHHHHHHcCeEEEEc
Confidence 356667544221 121 134788888887777665442 23677889998887766432 23466788999998887
Q ss_pred CC--CHHHHHHHHHhhCCeEEEeCcHHHHHH
Q 014951 205 RG--DVRYLMEDIQELKPTMFSGVPRVYDRI 233 (415)
Q Consensus 205 ~~--~~~~~~~~i~~~~~t~~~~~P~~~~~l 233 (415)
.. .++.+...+++.++..++..+.....+
T Consensus 93 ~~~~~~~~l~~~l~~~~~~~l~~~~~~~~~~ 123 (517)
T PRK08008 93 NARLLREESAWILQNSQASLLVTSAQFYPMY 123 (517)
T ss_pred CcccCHHHHHHHHHhcCceEEEEecchhHHH
Confidence 65 889999999999999999888665443
No 187
>PRK08279 long-chain-acyl-CoA synthetase; Validated
Probab=49.93 E-value=1.9e+02 Score=28.93 Aligned_cols=86 Identities=5% Similarity=-0.058 Sum_probs=64.8
Q ss_pred EeecHHHHHHhhhhhhhhhhccccCCCCCEEEEeCChhhHHHHHHHHHhhhcCcEEEEeCC--CHHHHHHHHHhhCCeEE
Q 014951 146 VLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTMF 223 (415)
Q Consensus 146 ~~th~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~vv~~~~--~~~~~~~~i~~~~~t~~ 223 (415)
.+|...+...+..+...+. ..++.++|++...++-... ....+++++..|+..+.... ..+++...++..++..+
T Consensus 62 ~~Ty~eL~~~~~~la~~L~--~~g~~~gd~V~i~~~n~~~-~v~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~l 138 (600)
T PRK08279 62 SISYAELNARANRYAHWAA--ARGVGKGDVVALLMENRPE-YLAAWLGLAKLGAVVALLNTQQRGAVLAHSLNLVDAKHL 138 (600)
T ss_pred cccHHHHHHHHHHHHHHHH--hcCCCCCCEEEEECCCCHH-HHHHHHHHHhcCcEEeecCCCCCHHHHHHHHHhcCCCEE
Confidence 5788888888777665442 2367789999988776542 24457788889999888765 78889999999999999
Q ss_pred EeCcHHHHHHH
Q 014951 224 SGVPRVYDRIY 234 (415)
Q Consensus 224 ~~~P~~~~~l~ 234 (415)
+........+.
T Consensus 139 i~~~~~~~~~~ 149 (600)
T PRK08279 139 IVGEELVEAFE 149 (600)
T ss_pred EEChHHHHHHH
Confidence 98877665543
No 188
>PRK15407 lipopolysaccharide biosynthesis protein RfbH; Provisional
Probab=49.45 E-value=48 Score=31.81 Aligned_cols=56 Identities=13% Similarity=0.181 Sum_probs=37.3
Q ss_pred CCCCCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCC-----CCCHHHHHHHHHhcCceEEEEc
Q 014951 4 RGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYD-----TLGANAVEFIINHAEVSIAFVQ 63 (415)
Q Consensus 4 ~Gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~-----~~~~~~l~~~l~~~~~~~ii~~ 63 (415)
.++++||.|.+-.+.. .....++...|+.++.++. .++.+.+...+.. +.++|+..
T Consensus 106 ~~~~pGd~VIv~~~t~---~a~~~~v~~~G~~pv~vdvd~~~~~id~~~le~~i~~-~tkaVi~~ 166 (438)
T PRK15407 106 RALKPGDEVITVAAGF---PTTVNPIIQNGLVPVFVDVELPTYNIDASLLEAAVSP-KTKAIMIA 166 (438)
T ss_pred cCCCCCCEEEECCCCc---HHHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHHcCc-CCeEEEEe
Confidence 4889999988765544 4445566778988877643 2456777776643 56666664
No 189
>PRK05605 long-chain-fatty-acid--CoA ligase; Validated
Probab=49.30 E-value=1.2e+02 Score=30.04 Aligned_cols=85 Identities=9% Similarity=-0.032 Sum_probs=65.6
Q ss_pred EeecHHHHHHhhhhhhhhhhccccCCCCCEEEEeCChhhHHHHHHHHHhhhcCcEEEEeCC--CHHHHHHHHHhhCCeEE
Q 014951 146 VLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTMF 223 (415)
Q Consensus 146 ~~th~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~vv~~~~--~~~~~~~~i~~~~~t~~ 223 (415)
.+|...+...+..+...+. ..++..+|++....|-... .....++++..|+..+.... .++++...+.+.++..+
T Consensus 57 ~~Ty~ql~~~~~~~A~~L~--~~gi~~gd~V~l~~~n~~~-~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i 133 (573)
T PRK05605 57 TTTYAELGKQVRRAAAGLR--ALGVRPGDRVAIVLPNCPQ-HIVAFYAVLRLGAVVVEHNPLYTAHELEHPFEDHGARVA 133 (573)
T ss_pred cccHHHHHHHHHHHHHHHH--HhCCCCCCEEEEECCCCHH-HHHHHHHHHhcCcEEeecCcCCCHHHHHHHHhccCCcEE
Confidence 4799988888877766543 2367789999988777643 33457778889999888765 89999999999999999
Q ss_pred EeCcHHHHHH
Q 014951 224 SGVPRVYDRI 233 (415)
Q Consensus 224 ~~~P~~~~~l 233 (415)
+........+
T Consensus 134 i~~~~~~~~~ 143 (573)
T PRK05605 134 IVWDKVAPTV 143 (573)
T ss_pred EechhhHHHH
Confidence 9877765544
No 190
>PRK07470 acyl-CoA synthetase; Validated
Probab=49.25 E-value=2.1e+02 Score=28.05 Aligned_cols=85 Identities=7% Similarity=-0.154 Sum_probs=63.9
Q ss_pred EeecHHHHHHhhhhhhhhhhccccCCCCCEEEEeCChhhHHHHHHHHHhhhcCcEEEEeCC--CHHHHHHHHHhhCCeEE
Q 014951 146 VLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTMF 223 (415)
Q Consensus 146 ~~th~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~vv~~~~--~~~~~~~~i~~~~~t~~ 223 (415)
.+|...+...+..+...+.. .++.+++++....+-.. .....+++++..|+..+..+. ...++...+++.+++.+
T Consensus 32 ~~Ty~el~~~~~~~a~~L~~--~g~~~g~~v~i~~~~~~-~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~~~~~~~~~~ 108 (528)
T PRK07470 32 SWTWREIDARVDALAAALAA--RGVRKGDRILVHSRNCN-QMFESMFAAFRLGAVWVPTNFRQTPDEVAYLAEASGARAM 108 (528)
T ss_pred cccHHHHHHHHHHHHHHHHH--hCCCCCCEEEEEcCCCH-HHHHHHHHHHhCCeEEEecCccCCHHHHHHHHHhcCceEE
Confidence 57888888888777665532 36778999988876653 223346788899999888776 78899999999999999
Q ss_pred EeCcHHHHHH
Q 014951 224 SGVPRVYDRI 233 (415)
Q Consensus 224 ~~~P~~~~~l 233 (415)
+..+...+.+
T Consensus 109 i~~~~~~~~~ 118 (528)
T PRK07470 109 ICHADFPEHA 118 (528)
T ss_pred EEcchhHHHH
Confidence 8887665443
No 191
>PRK08276 long-chain-fatty-acid--CoA ligase; Validated
Probab=48.98 E-value=1.7e+02 Score=28.43 Aligned_cols=85 Identities=9% Similarity=-0.108 Sum_probs=65.0
Q ss_pred EeecHHHHHHhhhhhhhhhhccccCCCCCEEEEeCChhhHHHHHHHHHhhhcCcEEEEeCC--CHHHHHHHHHhhCCeEE
Q 014951 146 VLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTMF 223 (415)
Q Consensus 146 ~~th~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~vv~~~~--~~~~~~~~i~~~~~t~~ 223 (415)
.+|...+...+..+...+.. .+++++|++....+-.. .....+++++..|+..+..+. ...++...+++.+++.+
T Consensus 11 ~~ty~el~~~v~~~a~~L~~--~g~~~~~~V~i~~~~~~-~~~~~~la~~~~G~~~~~l~~~~~~~~~~~~~~~~~~~~i 87 (502)
T PRK08276 11 VVTYGELEARSNRLAHGLRA--LGLREGDVVAILLENNP-EFFEVYWAARRSGLYYTPINWHLTAAEIAYIVDDSGAKVL 87 (502)
T ss_pred EEEHHHHHHHHHHHHHHHHH--hCCCCCCEEEEEeCCCH-HHHHHHHHHHhcCcEEEecccccCHHHHHHHHhcCCCCEE
Confidence 57888888877777665432 36788999988877663 334457788999999888765 78899999999999999
Q ss_pred EeCcHHHHHH
Q 014951 224 SGVPRVYDRI 233 (415)
Q Consensus 224 ~~~P~~~~~l 233 (415)
+..+.....+
T Consensus 88 i~~~~~~~~~ 97 (502)
T PRK08276 88 IVSAALADTA 97 (502)
T ss_pred EEccchhhHH
Confidence 9888766554
No 192
>PRK13383 acyl-CoA synthetase; Provisional
Probab=48.87 E-value=1.3e+02 Score=29.42 Aligned_cols=85 Identities=7% Similarity=-0.091 Sum_probs=64.9
Q ss_pred EeecHHHHHHhhhhhhhhhhccccCCCCCEEEEeCChhhHHHHHHHHHhhhcCcEEEEeCC--CHHHHHHHHHhhCCeEE
Q 014951 146 VLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTMF 223 (415)
Q Consensus 146 ~~th~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~vv~~~~--~~~~~~~~i~~~~~t~~ 223 (415)
.+|...+...+..+...+.. .++.++|++...++-.- .....+++++..|+..+.... ..+++...+++.++..+
T Consensus 60 ~lTy~el~~~~~~la~~L~~--~gi~~g~~V~i~~~~~~-~~~~~~la~~~~G~v~vpl~~~~~~~~l~~~l~~~~~~~i 136 (516)
T PRK13383 60 ALSYRELQRATESLARRLTR--DGVAPGRAVGVMCRNGR-GFVTAVFAVGLLGADVVPISTEFRSDALAAALRAHHISTV 136 (516)
T ss_pred cEeHHHHHHHHHHHHHHHHh--cCCCCCCEEEEECCCCH-HHHHHHHHHHHhCeEEEEcCccCCHHHHHHHHhcCCCCEE
Confidence 57888888888777665532 36778999988887543 333346778888999988776 88999999999999999
Q ss_pred EeCcHHHHHH
Q 014951 224 SGVPRVYDRI 233 (415)
Q Consensus 224 ~~~P~~~~~l 233 (415)
...+...+.+
T Consensus 137 i~~~~~~~~~ 146 (516)
T PRK13383 137 VADNEFAERI 146 (516)
T ss_pred EEchhHHHHH
Confidence 9888766554
No 193
>PRK08314 long-chain-fatty-acid--CoA ligase; Validated
Probab=48.74 E-value=1.1e+02 Score=30.03 Aligned_cols=87 Identities=5% Similarity=-0.024 Sum_probs=66.3
Q ss_pred EeecHHHHHHhhhhhhhhhhccc-cCCCCCEEEEeCChhhHHHHHHHHHhhhcCcEEEEeCC--CHHHHHHHHHhhCCeE
Q 014951 146 VLTNQAIVAEVLSVDQMFVVTGK-VCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTM 222 (415)
Q Consensus 146 ~~th~~l~~~~~~~~~~~~~~~~-~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~vv~~~~--~~~~~~~~i~~~~~t~ 222 (415)
.+|...+...+..+...+. .. ++.+++++..+.+-.- ..+..+++++..|+..+.... .+.++...+++.+++.
T Consensus 35 ~~Ty~~l~~~v~~~a~~L~--~~~g~~~g~~V~i~~~~~~-~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ 111 (546)
T PRK08314 35 AISYRELLEEAERLAGYLQ--QECGVRKGDRVLLYMQNSP-QFVIAYYAILRANAVVVPVNPMNREEELAHYVTDSGARV 111 (546)
T ss_pred eecHHHHHHHHHHHHHHHH--HhhCCCCCCEEEEECCCCh-HHHHHHHHHHHcCcEEeecCcCcCHHHHHHHHHhCCCeE
Confidence 4788888888877666542 22 6778899988877543 344457788999999888766 8889999999999999
Q ss_pred EEeCcHHHHHHHH
Q 014951 223 FSGVPRVYDRIYT 235 (415)
Q Consensus 223 ~~~~P~~~~~l~~ 235 (415)
++..+.....+.+
T Consensus 112 ii~~~~~~~~~~~ 124 (546)
T PRK08314 112 AIVGSELAPKVAP 124 (546)
T ss_pred EEEccchhhhHHH
Confidence 9988877665543
No 194
>PLN02330 4-coumarate--CoA ligase-like 1
Probab=48.52 E-value=1.5e+02 Score=29.19 Aligned_cols=86 Identities=9% Similarity=0.055 Sum_probs=64.5
Q ss_pred EEeecHHHHHHhhhhhhhhhhccccCCCCCEEEEeCChhhHHHHHHHHHhhhcCcEEEEeCC--CHHHHHHHHHhhCCeE
Q 014951 145 VVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTM 222 (415)
Q Consensus 145 v~~th~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~vv~~~~--~~~~~~~~i~~~~~t~ 222 (415)
..+|+..+...+..+...+.. .++.+++++...++-...+ ...+++++..|+..+.... ...++...++..++..
T Consensus 54 ~~~Ty~~l~~~~~~la~~L~~--~g~~~g~~V~i~~~~~~~~-~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~ 130 (546)
T PLN02330 54 KAVTYGEVVRDTRRFAKALRS--LGLRKGQVVVVVLPNVAEY-GIVALGIMAAGGVFSGANPTALESEIKKQAEAAGAKL 130 (546)
T ss_pred CcccHHHHHHHHHHHHHHHHH--hCCCCCCEEEEECCCchHH-HHHHHHHHHhCcEeccCCccCCHHHHHHHHHhcCCeE
Confidence 368999998888877765532 3677889998887765432 2346778888998877655 7789999999999999
Q ss_pred EEeCcHHHHHH
Q 014951 223 FSGVPRVYDRI 233 (415)
Q Consensus 223 ~~~~P~~~~~l 233 (415)
+...+..+..+
T Consensus 131 ~i~~~~~~~~~ 141 (546)
T PLN02330 131 IVTNDTNYGKV 141 (546)
T ss_pred EEEccchhhhH
Confidence 98877665544
No 195
>cd02070 corrinoid_protein_B12-BD B12 binding domain of corrinoid proteins. A family of small methanogenic corrinoid proteins that bind methyl-Co(III) 5-hydroxybenzimidazolylcobamide as a cofactor. They play a role on the methanogenesis from trimethylamine, dimethylamine or monomethylamine, which is initiated by a series of corrinoid-dependent methyltransferases.
Probab=48.27 E-value=1.6e+02 Score=24.60 Aligned_cols=53 Identities=13% Similarity=0.070 Sum_probs=36.5
Q ss_pred EEEEeCCh-hhHHHHHH-HHHhhhcCcEEEEeCC--CHHHHHHHHHhhCCeEEEeCc
Q 014951 175 TYFSFLPL-AHIYDQII-ETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTMFSGVP 227 (415)
Q Consensus 175 ~~l~~~p~-~~~~~~~~-~~~~l~~G~~vv~~~~--~~~~~~~~i~~~~~t~~~~~P 227 (415)
+++.+.|- .|..|... ....-..|..++.... .++.+.+.+++++|+.+..+-
T Consensus 85 vl~~~~~gd~H~lG~~~v~~~l~~~G~~vi~lG~~~p~~~l~~~~~~~~~d~v~lS~ 141 (201)
T cd02070 85 VVIGTVEGDIHDIGKNLVATMLEANGFEVIDLGRDVPPEEFVEAVKEHKPDILGLSA 141 (201)
T ss_pred EEEEecCCccchHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEec
Confidence 33344442 47777654 3344567999887654 789999999999999876544
No 196
>PRK07529 AMP-binding domain protein; Validated
Probab=46.67 E-value=2e+02 Score=29.11 Aligned_cols=98 Identities=8% Similarity=-0.015 Sum_probs=66.9
Q ss_pred CCCCeEEEEecCCCCCCCceEEeecHHHHHHhhhhhhhhhhccccCCCCCEEEEeCChhhHHHHHHHHHhhhcCcEEEEe
Q 014951 125 KKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFW 204 (415)
Q Consensus 125 ~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~vv~~ 204 (415)
.++.++++....+.. ..+...+|...+...+..+...+. ...+.++|++...+|-..-+ ...+++++..|. ++.+
T Consensus 38 ~p~~~Al~~~~~~~~-~~~~~~~Ty~eL~~~v~~~A~~L~--~~Gi~~gd~V~i~~~n~~e~-~~~~lA~~~~Gi-~~pi 112 (632)
T PRK07529 38 HPDAPALSFLLDADP-LDRPETWTYAELLADVTRTANLLH--SLGVGPGDVVAFLLPNLPET-HFALWGGEAAGI-ANPI 112 (632)
T ss_pred CCCCceEEeecccCC-CCCCceeEHHHHHHHHHHHHHHHH--HcCCCCCCEEEEECCCCHHH-HHHHHHHHHhCE-EEeC
Confidence 356677665433221 123467899999888887776553 23678999999998865432 334566677774 3433
Q ss_pred CC--CHHHHHHHHHhhCCeEEEeCc
Q 014951 205 RG--DVRYLMEDIQELKPTMFSGVP 227 (415)
Q Consensus 205 ~~--~~~~~~~~i~~~~~t~~~~~P 227 (415)
.. .++++...++..++..+....
T Consensus 113 ~~~~~~~~i~~~l~~~~~~~li~~~ 137 (632)
T PRK07529 113 NPLLEPEQIAELLRAAGAKVLVTLG 137 (632)
T ss_pred CCcCCHHHHHHHHHhcCCcEEEEeC
Confidence 33 889999999999999988854
No 197
>PRK13391 acyl-CoA synthetase; Provisional
Probab=46.40 E-value=2.8e+02 Score=26.98 Aligned_cols=99 Identities=10% Similarity=-0.016 Sum_probs=71.4
Q ss_pred CCCCeEEEEecCCCCCCCceEEeecHHHHHHhhhhhhhhhhccccCCCCCEEEEeCChhhHHHHHHHHHhhhcCcEEEEe
Q 014951 125 KKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFW 204 (415)
Q Consensus 125 ~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~vv~~ 204 (415)
.++.++++...++ -.+|...+...+..+...+. ..++.+++++..+.+-... .+..+++++..|+..+..
T Consensus 10 ~p~~~a~~~~~~~-------~~~ty~~l~~~~~~la~~L~--~~g~~~~~~V~v~~~~~~~-~~~~~~a~~~~G~~~~~l 79 (511)
T PRK13391 10 TPDKPAVIMASTG-------EVVTYRELDERSNRLAHLFR--SLGLKRGDHVAIFMENNLR-YLEVCWAAERSGLYYTCV 79 (511)
T ss_pred CCCceEEEecCCC-------CEeeHHHHHHHHHHHHHHHH--HcCCCCCCEEEEECCCCHH-HHHHHHHHHHhccEEecc
Confidence 3556666554332 24888988888877766542 2366788998888776542 233466788899999887
Q ss_pred CC--CHHHHHHHHHhhCCeEEEeCcHHHHHH
Q 014951 205 RG--DVRYLMEDIQELKPTMFSGVPRVYDRI 233 (415)
Q Consensus 205 ~~--~~~~~~~~i~~~~~t~~~~~P~~~~~l 233 (415)
.. +...+...++..++..+...+.....+
T Consensus 80 ~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~ 110 (511)
T PRK13391 80 NSHLTPAEAAYIVDDSGARALITSAAKLDVA 110 (511)
T ss_pred ccccCHHHHHHHHhccCCcEEEEchhhHHHH
Confidence 66 889999999999999999888766544
No 198
>PRK08315 AMP-binding domain protein; Validated
Probab=46.14 E-value=75 Score=31.40 Aligned_cols=65 Identities=14% Similarity=0.084 Sum_probs=51.4
Q ss_pred CCCCCCCeEEEEcCC--cHhHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEcCCChh
Q 014951 4 RGVNPGDRCGIYGSN--CPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIP 68 (415)
Q Consensus 4 ~Gv~~gd~V~l~~~n--~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~ 68 (415)
.+++++|++...++- +..++..+++++..|+.++......++..+...+++.++.+++.......
T Consensus 235 ~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~l~~~~~t~~~~~P~~~~ 301 (559)
T PRK08315 235 MKLTEEDRLCIPVPLYHCFGMVLGNLACVTHGATMVYPGEGFDPLATLAAVEEERCTALYGVPTMFI 301 (559)
T ss_pred cCCCCCceEEEecCcHHHHHHHHHHHHHHhccceEEEecCCCCHHHHHHHHHHcCCeEEecchHHHH
Confidence 478999999887775 34555667889999998886666778888999999999999988766443
No 199
>PRK06334 long chain fatty acid--[acyl-carrier-protein] ligase; Validated
Probab=46.05 E-value=1.1e+02 Score=30.24 Aligned_cols=82 Identities=9% Similarity=-0.009 Sum_probs=63.5
Q ss_pred EeecHHHHHHhhhhhhhhhhccccCCCCCEEEEeCChhhHHHHHHHHHhhhcCcEEEEeCC--CHHHHHHHHHhhCCeEE
Q 014951 146 VLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTMF 223 (415)
Q Consensus 146 ~~th~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~vv~~~~--~~~~~~~~i~~~~~t~~ 223 (415)
.+|...+...+..+...+ .-.++|++..++|-... .....++++..|+..+.... ..+++...++..+++.+
T Consensus 45 ~~Ty~el~~~~~~lA~~L-----~~~~gd~Val~~~n~~e-~~~~~lA~~~~G~v~vpl~~~~~~~~l~~~l~~~~~~~i 118 (539)
T PRK06334 45 KLSYNQVRKAVIALATKV-----SKYPDQHIGIMMPASAG-AYIAYFATLLSGKIPVMINWSQGLREVTACANLVGVTHV 118 (539)
T ss_pred cccHHHHHHHHHHHHHHH-----hhccCCeEEEEcCCchH-HHHHHHHHHhcCCeeEecCcccchHHHHHHHHHcCCCEE
Confidence 379999998888877766 22478999888886543 33456788999999888765 78899999999999999
Q ss_pred EeCcHHHHHH
Q 014951 224 SGVPRVYDRI 233 (415)
Q Consensus 224 ~~~P~~~~~l 233 (415)
......+..+
T Consensus 119 i~~~~~~~~~ 128 (539)
T PRK06334 119 LTSKQLMQHL 128 (539)
T ss_pred EehHHHHHHH
Confidence 9877666554
No 200
>TIGR03208 cyc_hxne_CoA_lg cyclohexanecarboxylate-CoA ligase. Members of this protein family are cyclohexanecarboxylate-CoA ligase. This enzyme prepares the aliphatic ring compound, cyclohexanecarboxylate, for dehydrogenation and then degradation by a pathway also used in benzoyl-CoA degradation in Rhodopseudomonas palustris.
Probab=45.88 E-value=2.4e+02 Score=27.76 Aligned_cols=82 Identities=11% Similarity=-0.011 Sum_probs=61.8
Q ss_pred EEeecHHHHHHhhhhhhhhhhccccCCCCCEEEEeCChhhHHHHHHHHHhhhcCcEEEEeCC--CHHHHHHHHHhhCCeE
Q 014951 145 VVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTM 222 (415)
Q Consensus 145 v~~th~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~vv~~~~--~~~~~~~~i~~~~~t~ 222 (415)
..+|...+......+...+. ...+.+++++...++-.. -.....++++..|+.++.... .++++...++..+++.
T Consensus 52 ~~~Ty~eL~~~~~~~a~~L~--~~g~~~g~~V~i~~~~~~-~~~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ 128 (538)
T TIGR03208 52 RRFSYRELDCRVDRIAVGLA--RLGVGRGDVVSFQLPNRW-EFTALYLACARIGAVLNPLMPIFRERELSFMLNHADSKV 128 (538)
T ss_pred ceecHHHHHHHHHHHHHHHH--HcCCCCCCEEEEECCCCH-HHHHHHHHHHhcCEEEeccCcccCHHHHHHHHHhcCCeE
Confidence 46899988888877766543 236778999988877543 334456778889998887765 7889999999999999
Q ss_pred EEeCcHH
Q 014951 223 FSGVPRV 229 (415)
Q Consensus 223 ~~~~P~~ 229 (415)
++..+..
T Consensus 129 li~~~~~ 135 (538)
T TIGR03208 129 FVVPSVF 135 (538)
T ss_pred EEEcccc
Confidence 8876643
No 201
>cd02067 B12-binding B12 binding domain (B12-BD). This domain binds different cobalamid derivates, like B12 (adenosylcobamide) or methylcobalamin or methyl-Co(III) 5-hydroxybenzimidazolylcobamide, it is found in several enzymes, such as glutamate mutase, methionine synthase and methylmalonyl-CoA mutase. Cobalamin undergoes a conformational change on binding the protein; the dimethylbenzimidazole group, which is coordinated to the cobalt in the free cofactor, moves away from the corrin and is replaced by a histidine contributed by the protein. The sequence Asp-X-His-X-X-Gly, which contains this histidine ligand, is conserved in many cobalamin-binding proteins.
Probab=45.38 E-value=1.3e+02 Score=22.51 Aligned_cols=46 Identities=7% Similarity=-0.081 Sum_probs=37.2
Q ss_pred HhHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEcCC
Q 014951 20 PEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQEN 65 (415)
Q Consensus 20 ~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~ii~~~~ 65 (415)
....+....+-..|.-++-+.+..+.+++...+.+.+|++|..+..
T Consensus 14 lG~~~~~~~l~~~G~~V~~lg~~~~~~~l~~~~~~~~pdvV~iS~~ 59 (119)
T cd02067 14 IGKNIVARALRDAGFEVIDLGVDVPPEEIVEAAKEEDADAIGLSGL 59 (119)
T ss_pred HHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEecc
Confidence 3444445556668999999999999999999999999998888753
No 202
>PRK02261 methylaspartate mutase subunit S; Provisional
Probab=45.07 E-value=1.5e+02 Score=23.15 Aligned_cols=46 Identities=9% Similarity=-0.098 Sum_probs=40.0
Q ss_pred HhHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEcCC
Q 014951 20 PEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQEN 65 (415)
Q Consensus 20 ~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~ii~~~~ 65 (415)
....+....+...|.-++-+-...+++++.....+.+|++|..+.-
T Consensus 18 lG~~iv~~~lr~~G~eVi~LG~~vp~e~i~~~a~~~~~d~V~lS~~ 63 (137)
T PRK02261 18 VGNKILDRALTEAGFEVINLGVMTSQEEFIDAAIETDADAILVSSL 63 (137)
T ss_pred HHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEcCc
Confidence 4555666777889999999999999999999999999999998753
No 203
>PRK02261 methylaspartate mutase subunit S; Provisional
Probab=45.06 E-value=1.5e+02 Score=23.15 Aligned_cols=45 Identities=9% Similarity=0.015 Sum_probs=35.2
Q ss_pred hhHHHHHH-HHHhhhcCcEEEEeCC--CHHHHHHHHHhhCCeEEEeCc
Q 014951 183 AHIYDQII-ETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTMFSGVP 227 (415)
Q Consensus 183 ~~~~~~~~-~~~~l~~G~~vv~~~~--~~~~~~~~i~~~~~t~~~~~P 227 (415)
.|..|... ....-..|..++.... .++++.+.+.+++|+.+..+-
T Consensus 15 ~H~lG~~iv~~~lr~~G~eVi~LG~~vp~e~i~~~a~~~~~d~V~lS~ 62 (137)
T PRK02261 15 CHAVGNKILDRALTEAGFEVINLGVMTSQEEFIDAAIETDADAILVSS 62 (137)
T ss_pred hhHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEcC
Confidence 47777654 4445677999998875 889999999999999977654
No 204
>PRK06164 acyl-CoA synthetase; Validated
Probab=44.43 E-value=1.6e+02 Score=28.88 Aligned_cols=81 Identities=11% Similarity=0.049 Sum_probs=62.2
Q ss_pred EeecHHHHHHhhhhhhhhhhccccCCCCCEEEEeCChhhHHHHHHHHHhhhcCcEEEEeCC--CHHHHHHHHHhhCCeEE
Q 014951 146 VLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTMF 223 (415)
Q Consensus 146 ~~th~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~vv~~~~--~~~~~~~~i~~~~~t~~ 223 (415)
.+|...+...+..+...+. ...+.++|++....+-.. ..+...++++..|+..+.... ...++...+++.+++.+
T Consensus 35 ~~Ty~~L~~~~~~~a~~L~--~~g~~~g~~V~i~~~n~~-~~~~~~la~~~~G~~~v~l~~~~~~~~l~~~i~~~~~~~i 111 (540)
T PRK06164 35 PLSRAELRALVDRLAAWLA--AQGVRRGDRVAVWLPNCI-EWVVLFLACARLGATVIAVNTRYRSHEVAHILGRGRARWL 111 (540)
T ss_pred cccHHHHHHHHHHHHHHHH--HhCCCCCCEEEEEcCCcH-HHHHHHHHHHHhCcEEEecCCCCCcHHHHHHHHhcCccEE
Confidence 5888988888877766553 236778999988877764 333456778889999888776 78899999999999999
Q ss_pred EeCcHH
Q 014951 224 SGVPRV 229 (415)
Q Consensus 224 ~~~P~~ 229 (415)
+..+.+
T Consensus 112 i~~~~~ 117 (540)
T PRK06164 112 VVWPGF 117 (540)
T ss_pred EEcccc
Confidence 876653
No 205
>PF00818 Ice_nucleation: Ice nucleation protein repeat; InterPro: IPR000258 Certain Gram-negative bacteria express proteins that enable them to promote nucleation of ice at relatively high temperatures (above -5C) [, ]. These proteins are localised at the outer membrane surface and can cause frost damage to many plants. The primary structure of the proteins contains a highly repetitive domain that dominates the sequence. The domain comprises a number of 48-residue repeats, which themselves contain 3 blocks of 16 residues, the first 8 of which are identical. It is thought that the repetitive domain may be responsible for aligning water molecules in the seed crystal. [.........48.residues.repeated.domain..........] / / | | \ \ AGYGSTxTagxxssli AGYGSTxTagxxsxlt AGYGSTxTaqxxsxlt [16.residues...] [16.residues...] [16.residues...] ; GO: 0009279 cell outer membrane
Probab=44.34 E-value=8.9 Score=17.30 Aligned_cols=9 Identities=44% Similarity=0.944 Sum_probs=6.8
Q ss_pred eeccCCCCc
Q 014951 321 GYGLTESCS 329 (415)
Q Consensus 321 ~yG~tE~~~ 329 (415)
+||+|+++.
T Consensus 1 GYGSTqTA~ 9 (16)
T PF00818_consen 1 GYGSTQTAG 9 (16)
T ss_pred CCCcccccC
Confidence 489998764
No 206
>PRK05677 long-chain-fatty-acid--CoA ligase; Validated
Probab=43.90 E-value=2.8e+02 Score=27.45 Aligned_cols=86 Identities=8% Similarity=-0.049 Sum_probs=64.0
Q ss_pred EEeecHHHHHHhhhhhhhhhhccccCCCCCEEEEeCChhhHHHHHHHHHhhhcCcEEEEeCC--CHHHHHHHHHhhCCeE
Q 014951 145 VVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTM 222 (415)
Q Consensus 145 v~~th~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~vv~~~~--~~~~~~~~i~~~~~t~ 222 (415)
..+|...+...+..+...+.. ...+.++|++...++-.. ......++++..|+..+.... ..+++...+++.++..
T Consensus 48 ~~~Ty~el~~~~~~la~~L~~-~~gi~~gd~Vai~~~n~~-~~~~~~la~~~~Ga~~v~l~~~~~~~~l~~~l~~~~~~~ 125 (562)
T PRK05677 48 KTLTYGELYKLSGAFAAWLQQ-HTDLKPGDRIAVQLPNVL-QYPVAVFGAMRAGLIVVNTNPLYTAREMEHQFNDSGAKA 125 (562)
T ss_pred ceeeHHHHHHHHHHHHHHHHH-hcCCCCCCEEEEECCCCH-HHHHHHHHHHHcCeEEeecCCCCCHHHHHHHHhccCceE
Confidence 358999998888877665421 125678999999887754 233346778889999888765 8899999999999999
Q ss_pred EEeCcHHHHH
Q 014951 223 FSGVPRVYDR 232 (415)
Q Consensus 223 ~~~~P~~~~~ 232 (415)
++........
T Consensus 126 ii~~~~~~~~ 135 (562)
T PRK05677 126 LVCLANMAHL 135 (562)
T ss_pred EEEecchhhh
Confidence 9887655443
No 207
>PLN02861 long-chain-fatty-acid-CoA ligase
Probab=43.24 E-value=2.3e+02 Score=28.90 Aligned_cols=87 Identities=10% Similarity=-0.021 Sum_probs=66.4
Q ss_pred EEeecHHHHHHhhhhhhhhhhccccCCCCCEEEEeCChhhHHHHHHHHHhhhcCcEEEEeCC--CHHHHHHHHHhhCCeE
Q 014951 145 VVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTM 222 (415)
Q Consensus 145 v~~th~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~vv~~~~--~~~~~~~~i~~~~~t~ 222 (415)
..+|...+...+..+...+. ..++.++|++..+++-.. -.+...++++..|+..+.+.. .++++...+++.+++.
T Consensus 76 ~~~Ty~el~~~v~~lA~~L~--~~Gv~~gd~Vai~~~n~~-e~~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~~~ 152 (660)
T PLN02861 76 VWLTYKEVYDAAIRIGSAIR--SRGVNPGDRCGIYGSNCP-EWIIAMEACNSQGITYVPLYDTLGANAVEFIINHAEVSI 152 (660)
T ss_pred eEEEHHHHHHHHHHHHHHHH--HcCCCCCCEEEEEcCCCH-HHHHHHHHHHHcCCeEEEecCCCCHHHHHHHHHcCCCCE
Confidence 45899999988887776542 236789999988887653 233456788899999887765 8899999999999999
Q ss_pred EEeCcHHHHHHH
Q 014951 223 FSGVPRVYDRIY 234 (415)
Q Consensus 223 ~~~~P~~~~~l~ 234 (415)
+++....+..+.
T Consensus 153 v~~~~~~~~~~~ 164 (660)
T PLN02861 153 AFVQESKISSIL 164 (660)
T ss_pred EEECHHHHHHHH
Confidence 998766655543
No 208
>PRK06087 short chain acyl-CoA synthetase; Reviewed
Probab=42.73 E-value=2.2e+02 Score=28.06 Aligned_cols=80 Identities=16% Similarity=0.035 Sum_probs=61.1
Q ss_pred EEeecHHHHHHhhhhhhhhhhccccCCCCCEEEEeCChhhHHHHHHHHHhhhcCcEEEEeCC--CHHHHHHHHHhhCCeE
Q 014951 145 VVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTM 222 (415)
Q Consensus 145 v~~th~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~vv~~~~--~~~~~~~~i~~~~~t~ 222 (415)
..+|...+...+..+...+.. .++.++|++...+|-.. -....+++++..|+..+.... ...++...++..++..
T Consensus 48 ~~~Ty~~l~~~v~~la~~l~~--~G~~~gd~V~i~~~n~~-~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ 124 (547)
T PRK06087 48 ASYTYSALDHAASRLANWLLA--KGIEPGDRVAFQLPGWC-EFTIIYLACLKVGAVSVPLLPSWREAELVWVLNKCQAKM 124 (547)
T ss_pred CEEEHHHHHHHHHHHHHHHHH--cCCCCCCEEEEECCCCH-HHHHHHHHHHHcCcEEeccchhcCHHHHHHHHHhcCCeE
Confidence 358999998888877766533 36788999988876653 334457788999998887765 7888999999999998
Q ss_pred EEeCc
Q 014951 223 FSGVP 227 (415)
Q Consensus 223 ~~~~P 227 (415)
++...
T Consensus 125 l~~~~ 129 (547)
T PRK06087 125 FFAPT 129 (547)
T ss_pred EEEec
Confidence 87643
No 209
>PRK10524 prpE propionyl-CoA synthetase; Provisional
Probab=42.44 E-value=3.4e+02 Score=27.36 Aligned_cols=98 Identities=17% Similarity=0.216 Sum_probs=70.0
Q ss_pred CCCCeEEEEecCCCCCCCceEEeecHHHHHHhhhhhhhhhhccccCCCCCEEEEeCChhhHHHHHHHHHhhhcCcEEEEe
Q 014951 125 KKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFW 204 (415)
Q Consensus 125 ~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~vv~~ 204 (415)
.++.+|++ +.+..+|. .-.+|...+...+..+...+. ..+..++|++..++|..- -....+++++..|+..+..
T Consensus 66 ~p~~~A~~-~~~~~~~~--~~~~Ty~eL~~~v~~lA~~L~--~~Gv~~gd~V~i~~~n~~-e~~~~~lA~~~~Gav~v~~ 139 (629)
T PRK10524 66 RPEQLALI-AVSTETDE--ERTYTFRQLHDEVNRMAAMLR--SLGVQRGDRVLIYMPMIA-EAAFAMLACARIGAIHSVV 139 (629)
T ss_pred CCCCeEEE-EEcCCCCc--eEEEeHHHHHHHHHHHHHHHH--HcCCCCCCEEEEECCCCH-HHHHHHHHHHHhCcEEEee
Confidence 45667754 43322222 346899999888877776553 236789999999988753 2333577788889888776
Q ss_pred CC--CHHHHHHHHHhhCCeEEEeCcH
Q 014951 205 RG--DVRYLMEDIQELKPTMFSGVPR 228 (415)
Q Consensus 205 ~~--~~~~~~~~i~~~~~t~~~~~P~ 228 (415)
.. .+..+...++..++..+++...
T Consensus 140 ~~~~~~~~l~~~l~~~~~~~li~~~~ 165 (629)
T PRK10524 140 FGGFASHSLAARIDDAKPVLIVSADA 165 (629)
T ss_pred CCCCCHHHHHHHHHhcCCcEEEEccC
Confidence 55 8899999999999999887653
No 210
>PLN02614 long-chain acyl-CoA synthetase
Probab=42.28 E-value=3.9e+02 Score=27.29 Aligned_cols=86 Identities=10% Similarity=-0.064 Sum_probs=65.6
Q ss_pred EEeecHHHHHHhhhhhhhhhhccccCCCCCEEEEeCChhhHHHHHHHHHhhhcCcEEEEeCC--CHHHHHHHHHhhCCeE
Q 014951 145 VVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTM 222 (415)
Q Consensus 145 v~~th~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~vv~~~~--~~~~~~~~i~~~~~t~ 222 (415)
..+|...+...+..+...+. ..++.++|++...++-.. -.....++++..|+..+.... .+.++...++..++.+
T Consensus 78 ~~~Ty~el~~~v~~lA~~L~--~~Gv~~Gd~Vai~~~n~~-e~~~~~lA~~~~Gav~vpl~~~~~~~~l~~il~~~~~~~ 154 (666)
T PLN02614 78 VWQTYQEVYDIVIKLGNSLR--SVGVKDEAKCGIYGANSP-EWIISMEACNAHGLYCVPLYDTLGAGAVEFIISHSEVSI 154 (666)
T ss_pred EEeEHHHHHHHHHHHHHHHH--HcCCCCCCEEEEEcCCCH-HHHHHHHHHHHcCCEEEEecCCCCHHHHHHHHhccCCCE
Confidence 35789988888877766542 236788999988888654 233357788889999888765 8899999999999999
Q ss_pred EEeCcHHHHHH
Q 014951 223 FSGVPRVYDRI 233 (415)
Q Consensus 223 ~~~~P~~~~~l 233 (415)
+++....+..+
T Consensus 155 vi~~~~~~~~~ 165 (666)
T PLN02614 155 VFVEEKKISEL 165 (666)
T ss_pred EEECHHHHHHH
Confidence 99877655544
No 211
>cd00615 Orn_deC_like Ornithine decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to ornithine decarboxylase (ODC), arginine decarboxylase (ADC) and lysine decarboxylase (LDC). ODC is a dodecamer composed of six homodimers and catalyzes the decarboxylation of tryptophan. ADC catalyzes the decarboxylation of arginine and LDC catalyzes the decarboxylation of lysine. Members of this family are widely found in all three forms of life.
Probab=41.83 E-value=1.4e+02 Score=26.78 Aligned_cols=55 Identities=13% Similarity=0.112 Sum_probs=36.2
Q ss_pred CCCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCC----------CCCHHHHHHHHHh-cCceEEEEc
Q 014951 6 VNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYD----------TLGANAVEFIINH-AEVSIAFVQ 63 (415)
Q Consensus 6 v~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~----------~~~~~~l~~~l~~-~~~~~ii~~ 63 (415)
+++||+|.+.-+.... ..-++...|+.++.+.+ ..+.+.++..++. .++++++..
T Consensus 96 ~~~gd~Vlv~~~~h~s---~~~~~~~~g~~~~~v~~~~~~~~~~~~~i~~~~l~~~l~~~~~~k~v~l~ 161 (294)
T cd00615 96 CGPGDKILIDRNCHKS---VINGLVLSGAVPVYLKPERNPYYGIAGGIPPETFKKALIEHPDAKAAVIT 161 (294)
T ss_pred CCCCCEEEEeCCchHH---HHHHHHHCCCEEEEecCccCcccCcCCCCCHHHHHHHHHhCCCceEEEEE
Confidence 5789988877554333 34456667887776644 3567888888865 467765554
No 212
>PLN03013 cysteine synthase
Probab=41.83 E-value=1.2e+02 Score=29.07 Aligned_cols=60 Identities=7% Similarity=0.022 Sum_probs=47.1
Q ss_pred CCCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEcCC
Q 014951 6 VNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQEN 65 (415)
Q Consensus 6 v~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~ii~~~~ 65 (415)
+++|....|....+-.-+...++|...|..+..+-|...+++....++..++++++++..
T Consensus 171 l~pG~~~VVeaSSGN~G~ALA~~a~~~G~~~~VvvP~~~s~~K~~~ira~GAeVi~v~~~ 230 (429)
T PLN03013 171 ISPGKSVLVEPTSGNTGIGLAFIAASRGYRLILTMPASMSMERRVLLKAFGAELVLTDPA 230 (429)
T ss_pred cCCCCcEEEEECCcHHHHHHHHHHHHcCCCEEEEECCCCcHHHHHHHHHcCCEEEEECCC
Confidence 478865555666666666677788889998888877777788888999999999999865
No 213
>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]
Probab=41.81 E-value=81 Score=30.53 Aligned_cols=59 Identities=14% Similarity=0.162 Sum_probs=41.5
Q ss_pred CCCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCC---CCCHHHHHHHHHhcCceEEEEcCCCh
Q 014951 6 VNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYD---TLGANAVEFIINHAEVSIAFVQENKI 67 (415)
Q Consensus 6 v~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~---~~~~~~l~~~l~~~~~~~ii~~~~~~ 67 (415)
++|||+|++=-|. ...+.. +.-..|+.+++|+. .+.++.++..+++.++|++++.+.+.
T Consensus 176 ~~pGd~v~vE~Pt-Y~~~~~--~~~~~g~~~~~vp~d~~G~~~e~le~~~~~~~~k~~y~~P~~q 237 (459)
T COG1167 176 LDPGDTVLVEDPT-YPGALQ--ALEALGARVIPVPVDEDGIDPEALEEALAQWKPKAVYVTPTFQ 237 (459)
T ss_pred CCCCCEEEEcCCC-cHHHHH--HHHHcCCcEEecCCCCCCCCHHHHHHHHhhcCCcEEEECCCCC
Confidence 4689999886663 333333 34455655555533 67899999999999999999988653
No 214
>KOG0025 consensus Zn2+-binding dehydrogenase (nuclear receptor binding factor-1) [Transcription; Energy production and conversion]
Probab=41.27 E-value=1.7e+02 Score=26.30 Aligned_cols=64 Identities=14% Similarity=0.115 Sum_probs=48.4
Q ss_pred CCCCCCeEEEEcCCc-HhHHHHHHHHHHcCCEEEe-cCCCCCHHHHHHHHHhcCceEEEEcCCChhh
Q 014951 5 GVNPGDRCGIYGSNC-PEWIIAMEACNSQAITYVP-LYDTLGANAVEFIINHAEVSIAFVQENKIPS 69 (415)
Q Consensus 5 Gv~~gd~V~l~~~n~-~~~~~~~lA~~~~G~~~~~-l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~ 69 (415)
.+++||.|.=-..|| +.-.+.++| -..|+..+. +-.+-.-+++...|...++.-+|++++...+
T Consensus 157 ~L~~GD~vIQNganS~VG~~ViQla-ka~GiktinvVRdR~~ieel~~~Lk~lGA~~ViTeeel~~~ 222 (354)
T KOG0025|consen 157 QLNKGDSVIQNGANSGVGQAVIQLA-KALGIKTINVVRDRPNIEELKKQLKSLGATEVITEEELRDR 222 (354)
T ss_pred hcCCCCeeeecCcccHHHHHHHHHH-HHhCcceEEEeecCccHHHHHHHHHHcCCceEecHHHhcch
Confidence 468899998888887 444555554 455665554 5567778999999999999999999876643
No 215
>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase. Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.
Probab=41.26 E-value=2.1e+02 Score=32.33 Aligned_cols=100 Identities=8% Similarity=-0.034 Sum_probs=68.8
Q ss_pred CCCCeEEEEecCCCCCCCceEEeecHHHHHHhhhhhhhhhhccccCCCCCEEEEeCChhhHHHHHHHHHhhhcCcEEEEe
Q 014951 125 KKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFW 204 (415)
Q Consensus 125 ~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~vv~~ 204 (415)
.|+.+|++...+..........+|+..+...+..+...+.. .+..+++++..+++-... ....+++++..|+..+..
T Consensus 249 ~pd~~A~~~~~~~~~~~~~~~~lTY~eL~~~~~~lA~~L~~--~gv~~g~~V~i~~~~~~~-~i~~~lA~l~~G~~~vpl 325 (1389)
T TIGR03443 249 HPDRTCVVETPSFLDPSSKTRSFTYKQINEASNILAHYLLK--TGIKRGDVVMIYAYRGVD-LVVAVMGVLKAGATFSVI 325 (1389)
T ss_pred CCCCeEEEeccccccccCCCceeeHHHHHHHHHHHHHHHHH--hCCCCCCEEEEEecCCHH-HHHHHHHHHhhCcEEecc
Confidence 45667765432211111123468999999888877765532 356789999888877642 244577889999998888
Q ss_pred CC--CHHHHHHHHHhhCCeEEEeCc
Q 014951 205 RG--DVRYLMEDIQELKPTMFSGVP 227 (415)
Q Consensus 205 ~~--~~~~~~~~i~~~~~t~~~~~P 227 (415)
+. .+.++...++..++..+....
T Consensus 326 dp~~p~~~~~~~l~~~~~~~li~~~ 350 (1389)
T TIGR03443 326 DPAYPPARQTIYLSVAKPRALIVIE 350 (1389)
T ss_pred CCCCcHHHHHHHHHhcCCCEEEEec
Confidence 76 778888889999998877643
No 216
>PLN02387 long-chain-fatty-acid-CoA ligase family protein
Probab=40.98 E-value=2.2e+02 Score=29.35 Aligned_cols=88 Identities=11% Similarity=0.051 Sum_probs=66.9
Q ss_pred EEeecHHHHHHhhhhhhhhhhccccCCCCCEEEEeCChhhHHHHHHHHHhhhcCcEEEEeCC--CHHHHHHHHHhhCCeE
Q 014951 145 VVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTM 222 (415)
Q Consensus 145 v~~th~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~vv~~~~--~~~~~~~~i~~~~~t~ 222 (415)
..+|...+...+..+...+. ...+.++|++..+++-.. -.+...++++..|+..+.... .++++...++..++..
T Consensus 105 ~~~Ty~el~~~v~~lA~~L~--~lG~~~gd~Vai~~~n~~-e~~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~~~ 181 (696)
T PLN02387 105 EWITYGQVFERVCNFASGLV--ALGHNKEERVAIFADTRA-EWLIALQGCFRQNITVVTIYASLGEEALCHSLNETEVTT 181 (696)
T ss_pred EEEEHHHHHHHHHHHHHHHH--HhCCCCCCEEEEEcCCCH-HHHHHHHHHHHcCCeEEEecCCCCHHHHHHHHHccCCCE
Confidence 45788888888877766442 236788999988887553 233456778889999887765 8999999999999999
Q ss_pred EEeCcHHHHHHHH
Q 014951 223 FSGVPRVYDRIYT 235 (415)
Q Consensus 223 ~~~~P~~~~~l~~ 235 (415)
+++....+..+.+
T Consensus 182 li~~~~~~~~l~~ 194 (696)
T PLN02387 182 VICDSKQLKKLID 194 (696)
T ss_pred EEECHHHHHHHHH
Confidence 9998877766654
No 217
>PRK12583 acyl-CoA synthetase; Provisional
Probab=40.93 E-value=2.9e+02 Score=27.21 Aligned_cols=81 Identities=7% Similarity=-0.090 Sum_probs=61.7
Q ss_pred EEeecHHHHHHhhhhhhhhhhccccCCCCCEEEEeCChhhHHHHHHHHHhhhcCcEEEEeCC--CHHHHHHHHHhhCCeE
Q 014951 145 VVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTM 222 (415)
Q Consensus 145 v~~th~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~vv~~~~--~~~~~~~~i~~~~~t~ 222 (415)
..+|...+...+..+...+.. ..+.+++++....|-.. ......++++..|+..+.... ...++...+++.+++.
T Consensus 44 ~~~Ty~~l~~~~~~~a~~L~~--~gi~~g~~V~i~~~~~~-~~~~~~~a~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~ 120 (558)
T PRK12583 44 LRYTWRQLADAVDRLARGLLA--LGVQPGDRVGIWAPNCA-EWLLTQFATARIGAILVNINPAYRASELEYALGQSGVRW 120 (558)
T ss_pred cEecHHHHHHHHHHHHHHHHH--hCCCCCCEEEEECCCCh-HHHHHHHHHHhhCCEEEecCCCCCHHHHHHHHHhcCCcE
Confidence 357999988888777665432 25778899888876654 233457788889999887765 8899999999999999
Q ss_pred EEeCcH
Q 014951 223 FSGVPR 228 (415)
Q Consensus 223 ~~~~P~ 228 (415)
++..+.
T Consensus 121 ii~~~~ 126 (558)
T PRK12583 121 VICADA 126 (558)
T ss_pred EEEecc
Confidence 888764
No 218
>PRK08162 acyl-CoA synthetase; Validated
Probab=40.56 E-value=2e+02 Score=28.27 Aligned_cols=85 Identities=9% Similarity=-0.051 Sum_probs=66.0
Q ss_pred EeecHHHHHHhhhhhhhhhhccccCCCCCEEEEeCChhhHHHHHHHHHhhhcCcEEEEeCC--CHHHHHHHHHhhCCeEE
Q 014951 146 VLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTMF 223 (415)
Q Consensus 146 ~~th~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~vv~~~~--~~~~~~~~i~~~~~t~~ 223 (415)
.+|...+...+..+...+. ..+...+|++....|-.. -....+++++..|+..+.... ...++...++..+++.+
T Consensus 43 ~~ty~~L~~~~~~~a~~L~--~~g~~~g~~v~i~~~~~~-~~~~~~lA~~~~G~~~vpl~~~~~~~~~~~~l~~~~~~~i 119 (545)
T PRK08162 43 RRTWAETYARCRRLASALA--RRGIGRGDTVAVLLPNIP-AMVEAHFGVPMAGAVLNTLNTRLDAASIAFMLRHGEAKVL 119 (545)
T ss_pred EEEHHHHHHHHHHHHHHHH--HhCCCCCCEEEEECCCch-HHHHHHHHHHHhCcEEeccccccChHHHHHHHHhCCCeEE
Confidence 5899999988887776553 236788999988877754 223346778888998887766 88999999999999999
Q ss_pred EeCcHHHHHH
Q 014951 224 SGVPRVYDRI 233 (415)
Q Consensus 224 ~~~P~~~~~l 233 (415)
+..+.....+
T Consensus 120 ~~~~~~~~~~ 129 (545)
T PRK08162 120 IVDTEFAEVA 129 (545)
T ss_pred EEccchhhHH
Confidence 9988776554
No 219
>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase. This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.
Probab=40.41 E-value=79 Score=29.55 Aligned_cols=56 Identities=14% Similarity=0.045 Sum_probs=37.1
Q ss_pred CCCCCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCC-----CCCHHHHHHHHHh---cCceEEEE
Q 014951 4 RGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYD-----TLGANAVEFIINH---AEVSIAFV 62 (415)
Q Consensus 4 ~Gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~-----~~~~~~l~~~l~~---~~~~~ii~ 62 (415)
.++++||.|.+-.+.. ....-++...|+.++.++. ..+.+.+...++. -++++|+.
T Consensus 64 l~~~~Gd~Viv~~~~~---~~~~~~~~~~G~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~t~~v~~ 127 (380)
T TIGR03588 64 LGVGPGDRVWTTPITF---VATANCALYCGAKVDFVDIDPDTGNIDEDALEKKLAAAKGKLPKAIVP 127 (380)
T ss_pred cCCCCCCEEEeCCcch---HHHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHHhhcccCCCceEEEE
Confidence 4678999977766543 3344566778888776543 2567888887763 35666664
No 220
>PLN02479 acetate-CoA ligase
Probab=40.31 E-value=2.4e+02 Score=28.06 Aligned_cols=85 Identities=6% Similarity=-0.091 Sum_probs=65.4
Q ss_pred EeecHHHHHHhhhhhhhhhhccccCCCCCEEEEeCChhhHHHHHHHHHhhhcCcEEEEeCC--CHHHHHHHHHhhCCeEE
Q 014951 146 VLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTMF 223 (415)
Q Consensus 146 ~~th~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~vv~~~~--~~~~~~~~i~~~~~t~~ 223 (415)
.+|...+......+...+. ..++.++|++....+-.- ......++++..|+..+.... ...++...+++.++..+
T Consensus 45 ~~ty~eL~~~~~~lA~~L~--~~g~~~gd~V~i~~~n~~-~~~~~~la~~~~G~v~v~l~~~~~~~~l~~~l~~~~~~~i 121 (567)
T PLN02479 45 RYTWAQTYQRCRRLASALA--KRSIGPGSTVAVIAPNIP-AMYEAHFGVPMAGAVVNCVNIRLNAPTIAFLLEHSKSEVV 121 (567)
T ss_pred eeeHHHHHHHHHHHHHHHH--HcCCCCCCEEEEECCCcH-HHHHHHHHHHhCCcEEEEeccccCHHHHHHHHhhcCceEE
Confidence 5788888888887776553 236789999998888643 333346788889998888776 88999999999999999
Q ss_pred EeCcHHHHHH
Q 014951 224 SGVPRVYDRI 233 (415)
Q Consensus 224 ~~~P~~~~~l 233 (415)
+..+..++..
T Consensus 122 i~~~~~~~~~ 131 (567)
T PLN02479 122 MVDQEFFTLA 131 (567)
T ss_pred EEchhhhhHH
Confidence 9887765443
No 221
>PRK07867 acyl-CoA synthetase; Validated
Probab=40.25 E-value=2.1e+02 Score=28.11 Aligned_cols=85 Identities=6% Similarity=-0.155 Sum_probs=63.3
Q ss_pred EeecHHHHHHhhhhhhhhhhccccCCCCCEEEEeCChhhHHHHHHHHHhhhcCcEEEEeCC--CHHHHHHHHHhhCCeEE
Q 014951 146 VLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTMF 223 (415)
Q Consensus 146 ~~th~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~vv~~~~--~~~~~~~~i~~~~~t~~ 223 (415)
.+|...+...+..+...+... ....+++++...++-.- .....+++++..|+.++.+.. .++++...+++.++..+
T Consensus 28 ~~Ty~el~~~v~~lA~~L~~~-~~~~~~~~V~i~~~n~~-~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~l 105 (529)
T PRK07867 28 FTSWREHIRGSAARAAALRAR-LDPTRPPHVGVLLDNTP-EFSLLLGAAALSGIVPVGLNPTRRGAALARDIAHADCQLV 105 (529)
T ss_pred EEeHHHHHHHHHHHHHHHHHh-hCCCCCCEEEEECCCCH-HHHHHHHHHHhcCCEEEEecCCCChHHHHHHHHhCCCeEE
Confidence 589999988888777665321 13466788777776432 334457788999999987766 88999999999999999
Q ss_pred EeCcHHHHH
Q 014951 224 SGVPRVYDR 232 (415)
Q Consensus 224 ~~~P~~~~~ 232 (415)
+........
T Consensus 106 i~~~~~~~~ 114 (529)
T PRK07867 106 LTESAHAEL 114 (529)
T ss_pred EECHhHHHH
Confidence 998766653
No 222
>PLN02556 cysteine synthase/L-3-cyanoalanine synthase
Probab=39.82 E-value=1.2e+02 Score=28.26 Aligned_cols=59 Identities=7% Similarity=0.012 Sum_probs=46.3
Q ss_pred CCCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEcC
Q 014951 6 VNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQE 64 (415)
Q Consensus 6 v~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~ii~~~ 64 (415)
++||....+....+-.-....++|...|..+..+-|...+.+....++..++++++++.
T Consensus 107 i~pG~~~vV~aSsGN~G~alA~~a~~~G~~~~ivvp~~~~~~k~~~lr~~GA~Vi~~~~ 165 (368)
T PLN02556 107 ITPGKTTLIEPTSGNMGISLAFMAAMKGYKMILTMPSYTSLERRVTMRAFGAELVLTDP 165 (368)
T ss_pred cCCCCCEEEEeCCchHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHcCCEEEEECC
Confidence 57785444555566666677778899999988887777777778999999999999974
No 223
>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional
Probab=38.86 E-value=69 Score=30.02 Aligned_cols=55 Identities=18% Similarity=0.231 Sum_probs=34.6
Q ss_pred cCCCCCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCC-----CCCHHHHHHHHHhcCceEEE
Q 014951 3 SRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYD-----TLGANAVEFIINHAEVSIAF 61 (415)
Q Consensus 3 ~~Gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~-----~~~~~~l~~~l~~~~~~~ii 61 (415)
..++++||.|.+..+. +.....++...|+.++.++. ..+.+.+...+.. +.++|+
T Consensus 67 al~~~~Gd~Viv~~~~---~~~~~~~~~~~G~~~v~vd~~~~~~~~d~~~l~~~i~~-~tkav~ 126 (379)
T PRK11658 67 ALGIGPGDEVITPSLT---WVSTLNMIVLLGATPVMVDVDRDTLMVTPEAIEAAITP-RTKAII 126 (379)
T ss_pred HcCCCCCCEEEECCCc---HHHHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHhccc-CCeEEE
Confidence 3467899988765543 33334556678888876643 2456777776643 556665
No 224
>PRK07638 acyl-CoA synthetase; Validated
Probab=38.50 E-value=2.1e+02 Score=27.55 Aligned_cols=69 Identities=12% Similarity=0.058 Sum_probs=52.8
Q ss_pred CCCCCCCeEEEEcCCcHh-HHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEcCCChhhhhhc
Q 014951 4 RGVNPGDRCGIYGSNCPE-WIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSC 73 (415)
Q Consensus 4 ~Gv~~gd~V~l~~~n~~~-~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~ 73 (415)
.+++++|++....+-... ++...+..+..|+.++.. +..+++.+...++..++.++.........+...
T Consensus 179 ~~~~~~d~~~~~~~l~~~~~l~~~~~~l~~g~~~~~~-~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~ 248 (487)
T PRK07638 179 FHMKREDSVLIAGTLVHSLFLYGAISTLYVGQTVHLM-RKFIPNQVLDKLETENISVMYTVPTMLESLYKE 248 (487)
T ss_pred cCcCCCCEEEEeecchHHHHHHHHHHHHccCcEEEEc-CCCCHHHHHHHHHHcCCeEEEeCcHHHHHHHhC
Confidence 467899998877664432 345566778889888855 567889999999999999999988877766554
No 225
>TIGR01139 cysK cysteine synthase A. This model distinguishes cysteine synthase A (CysK) from cysteine synthase B (CysM). CysM differs in having a broader specificity that also allows the use of thiosulfate to produce cysteine thiosulfonate.
Probab=38.26 E-value=1.6e+02 Score=26.43 Aligned_cols=62 Identities=8% Similarity=0.067 Sum_probs=44.4
Q ss_pred CC-CCCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEcCCC
Q 014951 4 RG-VNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENK 66 (415)
Q Consensus 4 ~G-v~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~ii~~~~~ 66 (415)
.| +.+|++|. ....+-.-..+.+++.+.|..+..+-|...++.....++..++++++++...
T Consensus 51 ~g~~~~g~~vv-~aSsGN~g~alA~~a~~~Gl~~~i~vp~~~~~~k~~~~~~~GA~v~~~~~~~ 113 (298)
T TIGR01139 51 RGLLKPGKTIV-EPTSGNTGIALAMVAAARGYKLILTMPETMSIERRKLLKAYGAELVLTPGAE 113 (298)
T ss_pred cCCCCCCCEEE-EeCCChhHHHHHHHHHHcCCeEEEEeCCccCHHHHHHHHHcCCEEEEECCCC
Confidence 44 36777774 4444445555566777899988887776665666788999999999998753
No 226
>PRK07059 Long-chain-fatty-acid--CoA ligase; Validated
Probab=37.71 E-value=2.6e+02 Score=27.67 Aligned_cols=85 Identities=6% Similarity=-0.016 Sum_probs=63.8
Q ss_pred EEeecHHHHHHhhhhhhhhhhccccCCCCCEEEEeCChhhHHHHHHHHHhhhcCcEEEEeCC--CHHHHHHHHHhhCCeE
Q 014951 145 VVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTM 222 (415)
Q Consensus 145 v~~th~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~vv~~~~--~~~~~~~~i~~~~~t~ 222 (415)
..+|+..+...+..+...+.. ..+.++|++..+++-... ....+++++..|+..+.... .+.++...+++.+++.
T Consensus 47 ~~lTy~~l~~~~~~~a~~L~~--~gi~~gd~V~i~~~n~~~-~~~~~la~~~~G~~~v~v~~~~~~~~~~~~~~~~~~~~ 123 (557)
T PRK07059 47 KAITYGELDELSRALAAWLQS--RGLAKGARVAIMMPNVLQ-YPVAIAAVLRAGYVVVNVNPLYTPRELEHQLKDSGAEA 123 (557)
T ss_pred ceeeHHHHHHHHHHHHHHHHH--hCCCCCCEEEEECCCCHH-HHHHHHHHHhcCeEEeccCcccCHHHHHHHHHccCceE
Confidence 368999999888877665422 367889999888776542 23345788889999987765 7889999999999999
Q ss_pred EEeCcHHHHH
Q 014951 223 FSGVPRVYDR 232 (415)
Q Consensus 223 ~~~~P~~~~~ 232 (415)
+.........
T Consensus 124 vi~~~~~~~~ 133 (557)
T PRK07059 124 IVVLENFATT 133 (557)
T ss_pred EEEchhhHHH
Confidence 8877655433
No 227
>TIGR01101 V_ATP_synt_F vacuolar ATP synthase F subunit. This model describes the vacuolar ATP synthase F subunit (14 kDa subunit) in eukaryotes. In some archaeal species this protein subunit is referred as G subunit
Probab=37.60 E-value=1.8e+02 Score=21.96 Aligned_cols=76 Identities=8% Similarity=0.173 Sum_probs=48.2
Q ss_pred CCCCeEEEEcCCcHhHHHHHHHHHHcCCEE---------EecCCCCCHHHHHHH----HHhcCceEEEEcCCChhhhhhc
Q 014951 7 NPGDRCGIYGSNCPEWIIAMEACNSQAITY---------VPLYDTLGANAVEFI----INHAEVSIAFVQENKIPSILSC 73 (415)
Q Consensus 7 ~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~---------~~l~~~~~~~~l~~~----l~~~~~~~ii~~~~~~~~~~~~ 73 (415)
..+..|+++.+ .+.+.-| ..+|.-. ..++...+.+++... +.+-+..+|+.++...+.+...
T Consensus 3 ~~~~~IaVIGD--~Dtv~GF---~LaGi~~~~~~~~~nf~~v~~~t~~eei~~~~~~~l~~~digIIlIte~~a~~i~~~ 77 (115)
T TIGR01101 3 EKGKLIAVIGD--EDTVVGF---LLGGIGEINKNRHPNFLVVDKNTTVSEIEDCFNRFLKRDDIAIILINQHIAEMIRHA 77 (115)
T ss_pred CCCcEEEEEec--HHHHHHH---HHhCCCccccccccceeeecCCCCHHHHHHHHHHHhhcCCeEEEEEcHHHHHHhHHH
Confidence 45778999998 6665443 4445432 335665666665555 5556788999998888877766
Q ss_pred CccCCCCccEEEEe
Q 014951 74 LPRCCLYLKTIVSF 87 (415)
Q Consensus 74 ~~~~~~~~~~v~~~ 87 (415)
+.+.....+.++.+
T Consensus 78 I~~~~~~~PaIieI 91 (115)
T TIGR01101 78 VDAHTRSIPAVLEI 91 (115)
T ss_pred HHhcCCcCCEEEEE
Confidence 65544444555544
No 228
>COG0436 Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=37.36 E-value=95 Score=29.33 Aligned_cols=38 Identities=24% Similarity=0.300 Sum_probs=23.8
Q ss_pred CcEEEEeCCCHHHHHHHHHhhCCeEEEeCcHHHHHHHH
Q 014951 198 GCSIGFWRGDVRYLMEDIQELKPTMFSGVPRVYDRIYT 235 (415)
Q Consensus 198 G~~vv~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~ 235 (415)
|..+-+.-.+...+.+.+.+.+-....+.|+..+....
T Consensus 242 GwRvG~~v~~~~~l~~~~~~~~~~~~~~~~~~~Q~aa~ 279 (393)
T COG0436 242 GWRIGWVVGPPEELIAALRKLKSYLTSCAPTPAQYAAI 279 (393)
T ss_pred ccceeEeecChHHHHHHHHHHHHhcccCCCHHHHHHHH
Confidence 44443333334677777777777777778877776554
No 229
>PRK13382 acyl-CoA synthetase; Provisional
Probab=37.28 E-value=2.8e+02 Score=27.28 Aligned_cols=85 Identities=8% Similarity=-0.153 Sum_probs=64.6
Q ss_pred EeecHHHHHHhhhhhhhhhhccccCCCCCEEEEeCChhhHHHHHHHHHhhhcCcEEEEeCC--CHHHHHHHHHhhCCeEE
Q 014951 146 VLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTMF 223 (415)
Q Consensus 146 ~~th~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~vv~~~~--~~~~~~~~i~~~~~t~~ 223 (415)
.+|...+...+..+...+. .....+++++...++-.-. .+..+++++..|+.++.... ...++...+++.+++.+
T Consensus 68 ~~Ty~el~~~~~~~A~~L~--~~g~~~g~~V~i~~~n~~~-~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~v 144 (537)
T PRK13382 68 TLTWRELDERSDALAAALQ--ALPIGEPRVVGIMCRNHRG-FVEALLAANRIGADILLLNTSFAGPALAEVVTREGVDTV 144 (537)
T ss_pred eecHHHHHHHHHHHHHHHH--HcCCCCCCEEEEEecCcHH-HHHHHHHHHHcCcEEEecCcccCHHHHHHHHHhcCCCEE
Confidence 5888888888777766542 2367889999888876543 34457788999999998876 78899999999999999
Q ss_pred EeCcHHHHHH
Q 014951 224 SGVPRVYDRI 233 (415)
Q Consensus 224 ~~~P~~~~~l 233 (415)
+........+
T Consensus 145 i~~~~~~~~~ 154 (537)
T PRK13382 145 IYDEEFSATV 154 (537)
T ss_pred EEchhhHHHH
Confidence 8876655443
No 230
>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=37.28 E-value=1.1e+02 Score=29.28 Aligned_cols=25 Identities=8% Similarity=0.080 Sum_probs=13.0
Q ss_pred HHHHHHHHhcCC-ceEEeeccCCCCc
Q 014951 305 HVEEFLRVTSGA-PLTQGYGLTESCS 329 (415)
Q Consensus 305 ~~~~~~~~~~~~-~~~~~yG~tE~~~ 329 (415)
+....|.+.+.. .+-..+|.+|+..
T Consensus 351 ~~~~~f~~~l~l~~~a~slGg~~Slv 376 (432)
T PRK06702 351 EAAKEFIANVKLATLVTHVADARTCV 376 (432)
T ss_pred HHHHHHHHhCccceeccccCCCCcce
Confidence 333344444443 4555677777654
No 231
>PRK11761 cysM cysteine synthase B; Provisional
Probab=37.15 E-value=1.5e+02 Score=26.62 Aligned_cols=58 Identities=9% Similarity=0.008 Sum_probs=44.3
Q ss_pred CCCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEcC
Q 014951 6 VNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQE 64 (415)
Q Consensus 6 v~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~ii~~~ 64 (415)
+++|++|... ..+-.-..+.++|...|..+..+-|...+......++..++++++++.
T Consensus 60 ~~~g~~vv~a-SsGN~g~alA~~a~~~G~~~~i~~p~~~~~~k~~~~~~~GA~v~~~~~ 117 (296)
T PRK11761 60 IKPGDTLIEA-TSGNTGIALAMIAAIKGYRMKLIMPENMSQERRAAMRAYGAELILVPK 117 (296)
T ss_pred CCCCCEEEEe-CCChHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHcCCEEEEeCC
Confidence 4677776554 445555566678888999888877776667788889999999999986
No 232
>cd07050 BMC_EutL_repeat2 ethanolamine utilization protein S (EutS), Bacterial Micro-Compartment (BMC) domain repeat 2. EutL proteins are homologs of the carboxysome shell protein. They are encoded within the eut operon and might be required for the formation of the outer shell of the bacterial eut polyhedral organelles which are involved in the cobalamin-dependent degradation of ethanolamine. Although it has been suggested that EutL might form hexamers and further assemble into the flat facets of the polyhedral outer shell of eut organelles at present no experimental evidence directly supports this view. EutL proteins contain two tandem BMC domains. This CD includes domain 2 (the second BMC domain of EutL).
Probab=36.81 E-value=82 Score=21.78 Aligned_cols=35 Identities=14% Similarity=0.120 Sum_probs=30.9
Q ss_pred cCCCCCCCeEEEEcCCcHhHHHHHHHHHHcCCEEE
Q 014951 3 SRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYV 37 (415)
Q Consensus 3 ~~Gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~ 37 (415)
..||++|+.++.+.....|.+..+=|++++.-+-+
T Consensus 9 ~agi~eGe~lAYLIapPlEa~y~lDaALKAAdV~~ 43 (87)
T cd07050 9 TAGIAEGEALAYLIAPPLEAMYGLDAALKAADVEL 43 (87)
T ss_pred hcCCCCCCeeeeeecCcHHHHHHHHHHHHhhceee
Confidence 46999999999999999999999999999886544
No 233
>COG0031 CysK Cysteine synthase [Amino acid transport and metabolism]
Probab=36.53 E-value=1.7e+02 Score=26.35 Aligned_cols=60 Identities=10% Similarity=0.084 Sum_probs=44.7
Q ss_pred CC-CCCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEcC
Q 014951 4 RG-VNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQE 64 (415)
Q Consensus 4 ~G-v~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~ii~~~ 64 (415)
.| ++||++|.=-.. +--=+...+.|...|..++.+-|..-..+-..+|+..++.+++++.
T Consensus 56 ~G~l~pG~tIVE~TS-GNTGI~LA~vaa~~Gy~~iivmP~~~S~er~~~l~a~GAevi~t~~ 116 (300)
T COG0031 56 RGLLKPGGTIVEATS-GNTGIALAMVAAAKGYRLIIVMPETMSQERRKLLRALGAEVILTPG 116 (300)
T ss_pred cCCCCCCCEEEEcCC-ChHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHcCCEEEEcCC
Confidence 44 799995544443 3344445566777888888887777777888999999999999997
No 234
>PRK06178 acyl-CoA synthetase; Validated
Probab=36.18 E-value=2.7e+02 Score=27.57 Aligned_cols=86 Identities=10% Similarity=0.025 Sum_probs=65.5
Q ss_pred EeecHHHHHHhhhhhhhhhhccccCCCCCEEEEeCChhhHHHHHHHHHhhhcCcEEEEeCC--CHHHHHHHHHhhCCeEE
Q 014951 146 VLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTMF 223 (415)
Q Consensus 146 ~~th~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~vv~~~~--~~~~~~~~i~~~~~t~~ 223 (415)
.+|...+...+..+...+. ..++++++++....+-... .....++++..|+..+.... ....+...+++.++..+
T Consensus 58 ~~Ty~~l~~~~~~la~~L~--~~g~~~g~~V~i~~~n~~~-~~~~~lA~~~~G~~~v~l~p~~~~~~~~~~l~~~~~~~i 134 (567)
T PRK06178 58 VITYAELDELSDRFAALLR--QRGVGAGDRVAVFLPNCPQ-FHIVFFGILKLGAVHVPVSPLFREHELSYELNDAGAEVL 134 (567)
T ss_pred eeeHHHHHHHHHHHHHHHH--HcCCCCCCEEEEECCCCcH-HHHHHHHHHHhCeEEeecCCCCCHHHHHHHHHhcCCcEE
Confidence 5899988888877766542 2366788998888776653 33456778888998887765 78899999999999999
Q ss_pred EeCcHHHHHHH
Q 014951 224 SGVPRVYDRIY 234 (415)
Q Consensus 224 ~~~P~~~~~l~ 234 (415)
.+.+.....+.
T Consensus 135 i~~~~~~~~l~ 145 (567)
T PRK06178 135 LALDQLAPVVE 145 (567)
T ss_pred EEccchHHHHH
Confidence 99888766554
No 235
>TIGR01501 MthylAspMutase methylaspartate mutase, S subunit. This model represents the S (sigma) subunit of methylaspartate mutase (glutamate mutase), a cobalamin-dependent enzyme that catalyzes the first step in a pathway of glutamate fermentation.
Probab=35.96 E-value=2.1e+02 Score=22.27 Aligned_cols=45 Identities=13% Similarity=0.051 Sum_probs=32.6
Q ss_pred hhHHHHHHHHH-hhhcCcEEEEeCC--CHHHHHHHHHhhCCeEEEeCc
Q 014951 183 AHIYDQIIETH-CIHKGCSIGFWRG--DVRYLMEDIQELKPTMFSGVP 227 (415)
Q Consensus 183 ~~~~~~~~~~~-~l~~G~~vv~~~~--~~~~~~~~i~~~~~t~~~~~P 227 (415)
.|..|...+.. .-..|..++.... +++++++...++++..+..+.
T Consensus 13 ~HdiGk~iv~~~l~~~GfeVi~LG~~v~~e~~v~aa~~~~adiVglS~ 60 (134)
T TIGR01501 13 CHAVGNKILDHAFTNAGFNVVNLGVLSPQEEFIKAAIETKADAILVSS 60 (134)
T ss_pred hhhHhHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEec
Confidence 36666654333 3446888887765 899999999999999876644
No 236
>PLN02860 o-succinylbenzoate-CoA ligase
Probab=35.91 E-value=2.1e+02 Score=28.36 Aligned_cols=80 Identities=11% Similarity=-0.044 Sum_probs=61.8
Q ss_pred EeecHHHHHHhhhhhhhhhhccccCCCCCEEEEeCChhhHHHHHHHHHhhhcCcEEEEeCC--CHHHHHHHHHhhCCeEE
Q 014951 146 VLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTMF 223 (415)
Q Consensus 146 ~~th~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~vv~~~~--~~~~~~~~i~~~~~t~~ 223 (415)
.+|...+...+..+...+.. .++.++|++...++-.-. ....+++++..|+.++.... .++++...+++.+++.+
T Consensus 32 ~~Ty~el~~~~~~la~~L~~--~Gv~~gd~V~v~~~n~~~-~~~~~la~~~~Gav~vpl~~~~~~~~l~~~l~~~~~~~i 108 (563)
T PLN02860 32 RRTGHEFVDGVLSLAAGLLR--LGLRNGDVVAIAALNSDL-YLEWLLAVACAGGIVAPLNYRWSFEEAKSAMLLVRPVML 108 (563)
T ss_pred eeeHHHHHHHHHHHHHHHHH--hCCCCCCEEEEEcCCCHH-HHHHHHHHhhccEEEEeCCcccCHHHHHHHHHhcCceEE
Confidence 58999998888777665432 367899999988876532 22346777888999888766 88999999999999998
Q ss_pred EeCcH
Q 014951 224 SGVPR 228 (415)
Q Consensus 224 ~~~P~ 228 (415)
...+.
T Consensus 109 ~~~~~ 113 (563)
T PLN02860 109 VTDET 113 (563)
T ss_pred EEecc
Confidence 88654
No 237
>PRK12406 long-chain-fatty-acid--CoA ligase; Provisional
Probab=35.83 E-value=2.8e+02 Score=26.92 Aligned_cols=87 Identities=2% Similarity=-0.136 Sum_probs=64.6
Q ss_pred EeecHHHHHHhhhhhhhhhhccccCCCCCEEEEeCChhhHHHHHHHHHhhhcCcEEEEeCC--CHHHHHHHHHhhCCeEE
Q 014951 146 VLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTMF 223 (415)
Q Consensus 146 ~~th~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~vv~~~~--~~~~~~~~i~~~~~t~~ 223 (415)
.+|...+...+......+. ..++.+++++..+.|-.. ......++++..|+..+.... ...++...++..+++.+
T Consensus 11 ~~Ty~el~~~~~~la~~l~--~~g~~~g~~V~v~~~~~~-~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~i 87 (509)
T PRK12406 11 RRSFDELAQRAARAAGGLA--ALGVRPGDCVALLMRNDF-AFFEAAYAAMRLGAYAVPVNWHFKPEEIAYILEDSGARVL 87 (509)
T ss_pred eecHHHHHHHHHHHHHHHH--HcCCCCCCEEEEEcCCCH-HHHHHHHHHHHcCeEEEecCcccCHHHHHHHHhccCCcEE
Confidence 5677778777766665442 236788999988877653 233456777888999888766 78999999999999999
Q ss_pred EeCcHHHHHHHH
Q 014951 224 SGVPRVYDRIYT 235 (415)
Q Consensus 224 ~~~P~~~~~l~~ 235 (415)
+......+.+..
T Consensus 88 ~~~~~~~~~~~~ 99 (509)
T PRK12406 88 IAHADLLHGLAS 99 (509)
T ss_pred EEccchhhhhhh
Confidence 988777665543
No 238
>TIGR01923 menE O-succinylbenzoate-CoA ligase. This model represents an enzyme, O-succinylbenzoate-CoA ligase, which is involved in the fourth step of the menaquinone biosynthesis pathway. O-succinylbenzoate-CoA ligase, together with menB - naphtoate synthase, take 2-succinylbenzoate and convert it into 1,4-di-hydroxy-2- naphtoate.
Probab=35.60 E-value=2.3e+02 Score=26.78 Aligned_cols=59 Identities=7% Similarity=-0.002 Sum_probs=47.2
Q ss_pred cCCCCCEEEEeCChhhHHHHHHHHHhhhcCcEEEEeCC--CHHHHHHHHHhhCCeEEEeCcH
Q 014951 169 VCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTMFSGVPR 228 (415)
Q Consensus 169 ~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~vv~~~~--~~~~~~~~i~~~~~t~~~~~P~ 228 (415)
.+..+|++...++-.- ......++++..|+..+..+. ....+...+++.++..+...+.
T Consensus 20 g~~~gd~v~i~~~~~~-~~~~~~la~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 80 (436)
T TIGR01923 20 GIRSGSRVALVGQNSI-EMVLLLHACLLLGAEIAMLNTRLTENERTNQLEDLDVQLLLTDSL 80 (436)
T ss_pred CCCCCCEEEEEcCCCH-HHHHHHHHHHhcCcEEEecCcCCCHHHHHHHHHhcCCCEEEEcCc
Confidence 6789999999888774 344457788999999888776 7888999999999999877654
No 239
>TIGR02262 benz_CoA_lig benzoate-CoA ligase family. Characterized members of this protein family include benzoate-CoA ligase, 4-hydroxybenzoate-CoA ligase, 2-aminobenzoate-CoA ligase, etc. Members are related to fatty acid and acetate CoA ligases.
Probab=35.35 E-value=3.4e+02 Score=26.33 Aligned_cols=85 Identities=9% Similarity=-0.042 Sum_probs=62.4
Q ss_pred EeecHHHHHHhhhhhhhhhhccccCCCCCEEEEeCChhhHHHHHHHHHhhhcCcEEEEeCC--CHHHHHHHHHhhCCeEE
Q 014951 146 VLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTMF 223 (415)
Q Consensus 146 ~~th~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~vv~~~~--~~~~~~~~i~~~~~t~~ 223 (415)
.+|...+...+..+...+. ....++++++...++-.. .....+++++..|+..+..+. ++.++...+++.+++.+
T Consensus 30 ~~ty~~l~~~~~~~a~~L~--~~g~~~g~~v~l~~~~~~-~~~~~~~a~~~~G~~~v~l~~~~~~~~l~~~~~~~~~~~~ 106 (508)
T TIGR02262 30 SLSYGELEAQVRRLGAALR--RLGVKREERVLLLMLDGV-DFPIAFLGAIRAGIVPVALNTLLTADDYAYMLEDSRARVV 106 (508)
T ss_pred eeeHHHHHHHHHHHHHHHH--HcCCCCCCEEEEECCCCH-HHHHHHHHHHHcCcEEeeccCCCCHHHHHHHHHhcCCeEE
Confidence 5788888877776665543 236678888887765542 223346778889999888765 88999999999999999
Q ss_pred EeCcHHHHHH
Q 014951 224 SGVPRVYDRI 233 (415)
Q Consensus 224 ~~~P~~~~~l 233 (415)
+........+
T Consensus 107 i~~~~~~~~~ 116 (508)
T TIGR02262 107 FVSGELLPVI 116 (508)
T ss_pred EEchhhHHHH
Confidence 9877665544
No 240
>TIGR01136 cysKM cysteine synthases. This model discriminates cysteine synthases (EC 2.5.1.47) (both CysK and CysM) from cystathionine beta-synthase, a protein found primarily in eukaryotes and carrying a C-terminal CBS domain lacking from this protein. Bacterial proteins lacking the CBS domain but otherwise showing resemblamnce to cystathionine beta-synthases and considerable phylogenetic distance from known cysteine synthases were excluded from the seed and score below the trusted cutoff.
Probab=35.20 E-value=1.8e+02 Score=26.13 Aligned_cols=58 Identities=7% Similarity=0.021 Sum_probs=43.4
Q ss_pred CCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEcCC
Q 014951 7 NPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQEN 65 (415)
Q Consensus 7 ~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~ii~~~~ 65 (415)
.+|++|. ....+-.-..+.++|...|..+..+-|...+......++..++++++++..
T Consensus 56 ~~g~~vv-~aSsGN~g~alA~~a~~~G~~~~i~vp~~~~~~k~~~~~~~GA~v~~~~~~ 113 (299)
T TIGR01136 56 KPGDTII-EATSGNTGIALAMVAAAKGYKLILTMPETMSLERRKLLRAYGAELILTPAE 113 (299)
T ss_pred CCCCEEE-EeCCChHHHHHHHHHHHcCCcEEEEECCCCCHHHHHHHHHcCCEEEEeCCC
Confidence 6777764 444455555666777889998888777666666778899999999998865
No 241
>PRK14807 histidinol-phosphate aminotransferase; Provisional
Probab=35.13 E-value=1.5e+02 Score=27.31 Aligned_cols=55 Identities=13% Similarity=0.130 Sum_probs=27.0
Q ss_pred CCCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCC----CCCHHHHHHHHHhcCceEEEEc
Q 014951 6 VNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYD----TLGANAVEFIINHAEVSIAFVQ 63 (415)
Q Consensus 6 v~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~----~~~~~~l~~~l~~~~~~~ii~~ 63 (415)
+++||.|++-.|. |.....++...|+.++.++. ....+.+...++..++++++..
T Consensus 97 ~~~gd~Vlv~~p~---y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~~~~~~~k~v~l~ 155 (351)
T PRK14807 97 INKGDVVIYPHPS---FAMYSVYSKIAGAVEIPVKLKEDYTYDVGSFIKVIEKYQPKLVFLC 155 (351)
T ss_pred cCCCCEEEEeCCC---hHHHHHHHHHcCCeEEEeecCCCCCCCHHHHHHHhhccCCCEEEEe
Confidence 3567776665432 22223344556665555432 2344555555554455555543
No 242
>PRK08751 putative long-chain fatty acyl CoA ligase; Provisional
Probab=34.45 E-value=2.7e+02 Score=27.45 Aligned_cols=86 Identities=9% Similarity=0.030 Sum_probs=63.7
Q ss_pred EeecHHHHHHhhhhhhhhhhccccCCCCCEEEEeCChhhHHHHHHHHHhhhcCcEEEEeCC--CHHHHHHHHHhhCCeEE
Q 014951 146 VLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTMF 223 (415)
Q Consensus 146 ~~th~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~vv~~~~--~~~~~~~~i~~~~~t~~ 223 (415)
.+|+..+......+...+. .....++++++..++|-... ....+++++..|+..+.... ...++...+.+.+++.+
T Consensus 50 ~~Ty~el~~~~~~la~~L~-~~~g~~~g~~V~i~~~~~~~-~~~~~lA~~~~G~~~v~l~p~~~~~~~~~~l~~~~~~~v 127 (560)
T PRK08751 50 TITYREADQLVEQFAAYLL-GELQLKKGDRVALMMPNCLQ-YPIATFGVLRAGLTVVNVNPLYTPRELKHQLIDSGASVL 127 (560)
T ss_pred eeeHHHHHHHHHHHHHHHH-HHhCCCCCCEEEEECCCCHH-HHHHHHHHHHhCeEEeccCccCCHHHHHHHHHhcCCeEE
Confidence 5898988887777665442 12367888999888776532 33456788889999987765 78899999999999999
Q ss_pred EeCcHHHHHH
Q 014951 224 SGVPRVYDRI 233 (415)
Q Consensus 224 ~~~P~~~~~l 233 (415)
.........+
T Consensus 128 i~~~~~~~~~ 137 (560)
T PRK08751 128 VVIDNFGTTV 137 (560)
T ss_pred EEcchhHHHH
Confidence 9877665543
No 243
>PRK06018 putative acyl-CoA synthetase; Provisional
Probab=34.18 E-value=2.8e+02 Score=27.26 Aligned_cols=86 Identities=10% Similarity=-0.164 Sum_probs=63.7
Q ss_pred EEeecHHHHHHhhhhhhhhhhccccCCCCCEEEEeCChhhHHHHHHHHHhhhcCcEEEEeCC--CHHHHHHHHHhhCCeE
Q 014951 145 VVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTM 222 (415)
Q Consensus 145 v~~th~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~vv~~~~--~~~~~~~~i~~~~~t~ 222 (415)
..+|...+......+...+.. ..+.++|++..+.+-.... ....++++..|+..+.... .++++...++..++..
T Consensus 38 ~~~Ty~el~~~v~~la~~L~~--~g~~~gd~v~i~~~~~~~~-~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ 114 (542)
T PRK06018 38 VRTTYAQIHDRALKVSQALDR--DGIKLGDRVATIAWNTWRH-LEAWYGIMGIGAICHTVNPRLFPEQIAWIINHAEDRV 114 (542)
T ss_pred eEEEHHHHHHHHHHHHHHHHH--cCCCCCCEEEEEcCCchHH-HHHHHHHHhcCeEeeccccccCHHHHHHHHhccCCCE
Confidence 467999998888777665532 3677889998887765432 2245677888999887765 7899999999999999
Q ss_pred EEeCcHHHHHH
Q 014951 223 FSGVPRVYDRI 233 (415)
Q Consensus 223 ~~~~P~~~~~l 233 (415)
++........+
T Consensus 115 i~~~~~~~~~~ 125 (542)
T PRK06018 115 VITDLTFVPIL 125 (542)
T ss_pred EEEccccHHHH
Confidence 98877655444
No 244
>PRK04870 histidinol-phosphate aminotransferase; Provisional
Probab=34.16 E-value=1.8e+02 Score=26.73 Aligned_cols=11 Identities=0% Similarity=0.329 Sum_probs=5.2
Q ss_pred HHHHHHHHhhC
Q 014951 209 RYLMEDIQELK 219 (415)
Q Consensus 209 ~~~~~~i~~~~ 219 (415)
..+++.+.+.+
T Consensus 233 ~~~i~~~~~~~ 243 (356)
T PRK04870 233 PAWIAELDKVR 243 (356)
T ss_pred HHHHHHHHHcc
Confidence 34545555444
No 245
>PRK07008 long-chain-fatty-acid--CoA ligase; Validated
Probab=33.71 E-value=3.4e+02 Score=26.71 Aligned_cols=84 Identities=5% Similarity=-0.219 Sum_probs=62.7
Q ss_pred EeecHHHHHHhhhhhhhhhhccccCCCCCEEEEeCChhhHHHHHHHHHhhhcCcEEEEeCC--CHHHHHHHHHhhCCeEE
Q 014951 146 VLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTMF 223 (415)
Q Consensus 146 ~~th~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~vv~~~~--~~~~~~~~i~~~~~t~~ 223 (415)
.+|...+......+...+. ..+..++|++..++|-.. -.....++++..|+.++.... .+.++...++..++..+
T Consensus 39 ~~Ty~el~~~~~~~a~~L~--~~g~~~~d~v~i~~~~~~-~~~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~~ 115 (539)
T PRK07008 39 RYTYRDCERRAKQLAQALA--ALGVEPGDRVGTLAWNGY-RHLEAYYGVSGSGAVCHTINPRLFPEQIAYIVNHAEDRYV 115 (539)
T ss_pred EeeHHHHHHHHHHHHHHHH--HcCCCCCCEEEEEcCCcH-HHHHHHHHHHhcCcEEeecccccCHHHHHHHHhccCCcEE
Confidence 4799988888777665442 236778999998887653 223345777888999888765 78899999999999998
Q ss_pred EeCcHHHHH
Q 014951 224 SGVPRVYDR 232 (415)
Q Consensus 224 ~~~P~~~~~ 232 (415)
...+.+...
T Consensus 116 ~~~~~~~~~ 124 (539)
T PRK07008 116 LFDLTFLPL 124 (539)
T ss_pred EEcchhHHH
Confidence 888766543
No 246
>cd02071 MM_CoA_mut_B12_BD methylmalonyl CoA mutase B12 binding domain. This domain binds to B12 (adenosylcobamide), which initiates the conversion of succinyl CoA and methylmalonyl CoA by forming an adenosyl radical, which then undergoes a rearrangement exchanging a hydrogen atom with a group attached to a neighboring carbon atom. This family is present in both mammals and bacteria. Bacterial members are heterodimers and involved in the fermentation of pyruvate to propionate. Mammalian members are homodimers and responsible for the conversion of odd-chain fatty acids and branched-chain amino acids via propionyl CoA to succinyl CoA for further degradation.
Probab=33.70 E-value=2.1e+02 Score=21.60 Aligned_cols=46 Identities=4% Similarity=-0.125 Sum_probs=38.5
Q ss_pred HhHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEcCC
Q 014951 20 PEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQEN 65 (415)
Q Consensus 20 ~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~ii~~~~ 65 (415)
....++.......|.-++.+.+..+.+++.....+.+|++|..+..
T Consensus 14 lG~~~~~~~l~~~G~~vi~lG~~vp~e~~~~~a~~~~~d~V~iS~~ 59 (122)
T cd02071 14 RGAKVIARALRDAGFEVIYTGLRQTPEEIVEAAIQEDVDVIGLSSL 59 (122)
T ss_pred HHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEccc
Confidence 3444555667788999999999999999999999999999998754
No 247
>TIGR00936 ahcY adenosylhomocysteinase. This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704).
Probab=33.52 E-value=2.5e+02 Score=26.65 Aligned_cols=58 Identities=10% Similarity=-0.036 Sum_probs=47.6
Q ss_pred CCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEec--CCCCCHHHHHHHHHhcCceEEEEcC
Q 014951 7 NPGDRCGIYGSNCPEWIIAMEACNSQAITYVPL--YDTLGANAVEFIINHAEVSIAFVQE 64 (415)
Q Consensus 7 ~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l--~~~~~~~~l~~~l~~~~~~~ii~~~ 64 (415)
-+|-+|+.+++=.++..+.+..+...|+-+... +|..+.++....|...+..+.-...
T Consensus 30 l~G~~i~~~~hl~~~Ta~l~~~L~~~GA~v~~~~~np~stqd~vaaaL~~~gi~v~a~~~ 89 (406)
T TIGR00936 30 LKGARIAACLHVTVETAVLIETLVAGGAEVAWTSCNPLSTQDDVAAALAKAGIPVFAWRG 89 (406)
T ss_pred CCCCEEEEEEechHHHHHHHHHHHHcCCEEEEEccCCccccHHHHHHHHhCCceEEEecC
Confidence 368899999999999999999999999987755 7776778888888888888654433
No 248
>cd01445 TST_Repeats Thiosulfate sulfurtransferases (TST) contain 2 copies of the Rhodanese Homology Domain. Only the second repeat contains the catalytically active Cys residue. The role of the 1st repeat is uncertain, but believed to be involved in protein interaction. This CD aligns the 1st and 2nd repeats.
Probab=33.15 E-value=62 Score=25.23 Aligned_cols=34 Identities=6% Similarity=-0.105 Sum_probs=27.4
Q ss_pred ccCCCCCCCeEEEEcCC---cHhHHHHHHHHHHcCCE
Q 014951 2 RSRGVNPGDRCGIYGSN---CPEWIIAMEACNSQAIT 35 (415)
Q Consensus 2 ~~~Gv~~gd~V~l~~~n---~~~~~~~~lA~~~~G~~ 35 (415)
.+.||.+++.|.+++.. +.....+++++..+|..
T Consensus 88 ~~~GI~~~~~vVvY~~~~~~g~~A~r~~~~l~~~G~~ 124 (138)
T cd01445 88 EAKGIDLDKHLIATDGDDLGGFTACHIALAARLCGHP 124 (138)
T ss_pred HHcCCCCCCeEEEECCCCCcchHHHHHHHHHHHcCCC
Confidence 46799999999999975 56677778888888865
No 249
>cd06448 L-Ser-dehyd Serine dehydratase is a pyridoxal phosphate (PLP)-dependent enzyme which catalyzes the conversion of L- , D-serine, or L-threonine to pyruvate/ketobutyrate and ammonia.
Probab=33.04 E-value=1.5e+02 Score=27.07 Aligned_cols=58 Identities=7% Similarity=-0.090 Sum_probs=45.0
Q ss_pred CCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEcCC
Q 014951 7 NPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQEN 65 (415)
Q Consensus 7 ~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~ii~~~~ 65 (415)
++++.|...+ .+-.-..+.++|...|..+..+-|...+......++..++++++++..
T Consensus 49 ~~~~~vv~aS-sGN~g~alA~~a~~~G~~~~iv~p~~~~~~k~~~l~~~GA~v~~~~~~ 106 (316)
T cd06448 49 NECVHVVCSS-GGNAGLAAAYAARKLGVPCTIVVPESTKPRVVEKLRDEGATVVVHGKV 106 (316)
T ss_pred ccCCeEEEeC-CcHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHcCCEEEEECCc
Confidence 3456665555 455566667888899999988888777778889999999999998765
No 250
>PRK06188 acyl-CoA synthetase; Validated
Probab=32.71 E-value=1.3e+02 Score=29.39 Aligned_cols=68 Identities=12% Similarity=-0.005 Sum_probs=53.3
Q ss_pred CCCCCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEcCCChhhhhh
Q 014951 4 RGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILS 72 (415)
Q Consensus 4 ~Gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~ 72 (415)
.+++.+|++...++-+-.+...+++.+..|+..+..+ ...++.+...+++.++.+++........+..
T Consensus 204 ~~~~~~~~~l~~~pl~~~~g~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~P~~l~~l~~ 271 (524)
T PRK06188 204 WEWPADPRFLMCTPLSHAGGAFFLPTLLRGGTVIVLA-KFDPAEVLRAIEEQRITATFLVPTMIYALLD 271 (524)
T ss_pred cCCCcCcEEEEecCchhhhhHHHHHHHHcCCEEEEcC-CCCHHHHHHHHHHhCCEEEEehHHHHHHHHh
Confidence 4678899998888876555566778888898888765 4678889999999999999987766555443
No 251
>PRK10696 tRNA 2-thiocytidine biosynthesis protein TtcA; Provisional
Probab=32.57 E-value=2e+02 Score=25.25 Aligned_cols=60 Identities=12% Similarity=0.127 Sum_probs=42.8
Q ss_pred CCCCCeEEEEcCCcHhHHHHHHHHHHc------C--CEEEecCCC---CCHHHHHHHHHhcCceEEEEcCC
Q 014951 6 VNPGDRCGIYGSNCPEWIIAMEACNSQ------A--ITYVPLYDT---LGANAVEFIINHAEVSIAFVQEN 65 (415)
Q Consensus 6 v~~gd~V~l~~~n~~~~~~~~lA~~~~------G--~~~~~l~~~---~~~~~l~~~l~~~~~~~ii~~~~ 65 (415)
+.+||+|+|.+.-+.+.++.+..+... + ..++.++.. ...+.+..+.+..+..+.+.+.+
T Consensus 26 i~~~~kilVa~SGG~DS~~LL~ll~~l~~~~~~~~~l~av~vd~g~~~~~~~~~~~~~~~lgI~~~v~~~~ 96 (258)
T PRK10696 26 IEEGDRVMVCLSGGKDSYTLLDILLNLQKRAPINFELVAVNLDQKQPGFPEHVLPEYLESLGVPYHIEEQD 96 (258)
T ss_pred CCCCCEEEEEecCCHHHHHHHHHHHHHHHhCCCCeEEEEEEecCCCCCCCHHHHHHHHHHhCCCEEEEEec
Confidence 578999999999999998877666442 2 355566654 34455677778888887776543
No 252
>PRK10717 cysteine synthase A; Provisional
Probab=32.49 E-value=2e+02 Score=26.33 Aligned_cols=59 Identities=10% Similarity=0.078 Sum_probs=44.5
Q ss_pred CCCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEcCC
Q 014951 6 VNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQEN 65 (415)
Q Consensus 6 v~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~ii~~~~ 65 (415)
+++|+.|.- ...+-.-..+.++|..+|..+..+-|...++.....++..++++++++..
T Consensus 61 ~~~g~~vv~-aSsGN~g~alA~~a~~~G~~~~vv~p~~~~~~k~~~~~~~GA~V~~~~~~ 119 (330)
T PRK10717 61 LKPGGTIVE-GTAGNTGIGLALVAAARGYKTVIVMPETQSQEKKDLLRALGAELVLVPAA 119 (330)
T ss_pred CCCCCEEEE-eCCcHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHcCCEEEEeCCc
Confidence 467777655 44455556667788889988887777666777888999999999999863
No 253
>PRK12582 acyl-CoA synthetase; Provisional
Probab=32.39 E-value=2.4e+02 Score=28.52 Aligned_cols=80 Identities=10% Similarity=0.010 Sum_probs=59.9
Q ss_pred EEeecHHHHHHhhhhhhhhhhccccCCCCCEEEEeCChhhHHHHHHHHHhhhcCcEEEEeCC--C-----HHHHHHHHHh
Q 014951 145 VVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG--D-----VRYLMEDIQE 217 (415)
Q Consensus 145 v~~th~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~vv~~~~--~-----~~~~~~~i~~ 217 (415)
-.+|...+...+..+...+. ...+.++|++..+++-. .-.....++++..|+..+.... . ..++...++.
T Consensus 79 ~~~Ty~el~~~v~~lA~~L~--~~Gv~~gd~V~i~~~n~-~e~~~~~lA~~~~G~v~vpl~p~~~~~~~~~~~l~~~l~~ 155 (624)
T PRK12582 79 RKVTYGEAKRAVDALAQALL--DLGLDPGRPVMILSGNS-IEHALMTLAAMQAGVPAAPVSPAYSLMSHDHAKLKHLFDL 155 (624)
T ss_pred EEeEHHHHHHHHHHHHHHHH--HcCCCCCCEEEEecCCC-HHHHHHHHHHHHcCCeEeeccCccccccCCHHHHHHHHHh
Confidence 47899999888887766542 23678899999988844 3344457788889999887754 2 3789999999
Q ss_pred hCCeEEEeCc
Q 014951 218 LKPTMFSGVP 227 (415)
Q Consensus 218 ~~~t~~~~~P 227 (415)
.++..++...
T Consensus 156 ~~~~~vi~~~ 165 (624)
T PRK12582 156 VKPRVVFAQS 165 (624)
T ss_pred cCCcEEEecC
Confidence 9999888754
No 254
>PRK05852 acyl-CoA synthetase; Validated
Probab=31.94 E-value=4e+02 Score=26.12 Aligned_cols=78 Identities=4% Similarity=-0.198 Sum_probs=59.1
Q ss_pred EeecHHHHHHhhhhhhhhhhccccCCCCCEEEEeCChhhHHHHHHHHHhhhcCcEEEEeCC--CHHHHHHHHHhhCCeEE
Q 014951 146 VLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTMF 223 (415)
Q Consensus 146 ~~th~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~vv~~~~--~~~~~~~~i~~~~~t~~ 223 (415)
.+|...+......+...+. ..++.++|++...++-.- .....+++++..|+..+.... .+.++...++..++..+
T Consensus 43 ~~Ty~~l~~~~~~~a~~L~--~~gv~~gd~V~i~~~n~~-~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i 119 (534)
T PRK05852 43 AISYRDLARLVDDLAGQLT--RSGLLPGDRVALRMGSNA-EFVVALLAASRADLVVVPLDPALPIAEQRVRSQAAGARVV 119 (534)
T ss_pred cccHHHHHHHHHHHHHHHH--hcCCCCCCEEEEECCCcH-HHHHHHHHHHHcCcEEeecCCCCCcHHHHHHHHhCCCCEE
Confidence 5788888887777666542 336788999988876653 334457788999999888766 77889999999999998
Q ss_pred EeC
Q 014951 224 SGV 226 (415)
Q Consensus 224 ~~~ 226 (415)
+..
T Consensus 120 i~~ 122 (534)
T PRK05852 120 LID 122 (534)
T ss_pred EEc
Confidence 753
No 255
>PRK12476 putative fatty-acid--CoA ligase; Provisional
Probab=31.67 E-value=5.5e+02 Score=25.81 Aligned_cols=103 Identities=13% Similarity=0.036 Sum_probs=71.5
Q ss_pred CCCeEEEEec--CCCCCCCceEEeecHHHHHHhhhhhhhhhhccccCCCCCEEEEeCChhhHHHHHHHHHhhhcCcEEEE
Q 014951 126 KTNISTIMYT--SGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGF 203 (415)
Q Consensus 126 ~~~~~~i~~T--SGtTG~pK~v~~th~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~vv~ 203 (415)
++.++++... .+++|. ...+|...+...+..+...+.. .+.++|++...++-.. -.+...++++..|+..+.
T Consensus 48 ~~~~a~~~~~~~~~~~g~--~~~~Ty~el~~~~~~lA~~L~~---~~~~gd~V~l~~~n~~-e~~~~~lA~~~aG~v~vp 121 (612)
T PRK12476 48 GDTVAYRYLDHSHSAAGC--AVELTWTQLGVRLRAVGARLQQ---VAGPGDRVAILAPQGI-DYVAGFFAAIKAGTIAVP 121 (612)
T ss_pred CCceEEEEEccCCCCCCc--ceEEeHHHHHHHHHHHHHHHHH---hcCCCCEEEEECCCCh-hHHHHHHHHHHcCceeEe
Confidence 4566654321 112232 3468999999888887776532 2688999999888774 233456788899998876
Q ss_pred e-CC--C--HHHHHHHHHhhCCeEEEeCcHHHHHHH
Q 014951 204 W-RG--D--VRYLMEDIQELKPTMFSGVPRVYDRIY 234 (415)
Q Consensus 204 ~-~~--~--~~~~~~~i~~~~~t~~~~~P~~~~~l~ 234 (415)
. .. . ++++...++..++..++..+.....+.
T Consensus 122 l~~~~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~ 157 (612)
T PRK12476 122 LFAPELPGHAERLDTALRDAEPTVVLTTTAAAEAVE 157 (612)
T ss_pred cCCCCcchhHHHHHHHHHhCCCCEEEEcHHHHHHHH
Confidence 5 32 2 678999999999999998877665543
No 256
>PRK05939 hypothetical protein; Provisional
Probab=31.31 E-value=1.4e+02 Score=28.27 Aligned_cols=45 Identities=9% Similarity=0.069 Sum_probs=18.8
Q ss_pred HHHHcCCEEEecCCCCCHH-HHHHHHHhcCceEEEEcCCChhhhhh
Q 014951 28 ACNSQAITYVPLYDTLGAN-AVEFIINHAEVSIAFVQENKIPSILS 72 (415)
Q Consensus 28 A~~~~G~~~~~l~~~~~~~-~l~~~l~~~~~~~ii~~~~~~~~~~~ 72 (415)
+++..|-.++..++.++.. .+-..+...+.++.+++....+.+.+
T Consensus 81 all~~Gd~Vv~~~~~y~~t~~~~~~l~~~G~~v~~v~~~d~e~l~~ 126 (397)
T PRK05939 81 TLLRAGDHLVSSQFLFGNTNSLFGTLRGLGVEVTMVDATDVQNVAA 126 (397)
T ss_pred HHcCCCCEEEECCCccccHHHHHHHHHhcCCEEEEECCCCHHHHHH
Confidence 3444554444433333221 12223445555555555433333333
No 257
>TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG. This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases.
Probab=31.28 E-value=2.8e+02 Score=24.62 Aligned_cols=79 Identities=13% Similarity=0.093 Sum_probs=49.8
Q ss_pred CCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCCCC----CHHHHHHHHHhcCceEEEEcCCC-hhhhhhcCccCCCCc
Q 014951 7 NPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTL----GANAVEFIINHAEVSIAFVQENK-IPSILSCLPRCCLYL 81 (415)
Q Consensus 7 ~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~~~----~~~~l~~~l~~~~~~~ii~~~~~-~~~~~~~~~~~~~~~ 81 (415)
+.|-.|..++.+....... .+...|..+..++... ..+++...+++.+|+++|+|.-. ........+ ...
T Consensus 29 ~~g~~v~f~~~~~~~~~~~--~i~~~g~~v~~~~~~~~~~~d~~~~~~~l~~~~~d~vV~D~y~~~~~~~~~~k---~~~ 103 (279)
T TIGR03590 29 AQGAEVAFACKPLPGDLID--LLLSAGFPVYELPDESSRYDDALELINLLEEEKFDILIVDHYGLDADWEKLIK---EFG 103 (279)
T ss_pred HCCCEEEEEeCCCCHHHHH--HHHHcCCeEEEecCCCchhhhHHHHHHHHHhcCCCEEEEcCCCCCHHHHHHHH---HhC
Confidence 3567788888776555433 3467888877775433 35578889999999999999743 222333222 223
Q ss_pred cEEEEecCC
Q 014951 82 KTIVSFANV 90 (415)
Q Consensus 82 ~~v~~~~~~ 90 (415)
..++++++.
T Consensus 104 ~~l~~iDD~ 112 (279)
T TIGR03590 104 RKILVIDDL 112 (279)
T ss_pred CeEEEEecC
Confidence 466676664
No 258
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=31.23 E-value=4e+02 Score=29.25 Aligned_cols=97 Identities=9% Similarity=0.068 Sum_probs=71.2
Q ss_pred CCCCeEEEEecCCCCCCCceEEeecHHHHHHhhhhhhhhhhccccCCCCCEEEEeCChhhHHHHHHHHHhhhcCcEEEEe
Q 014951 125 KKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFW 204 (415)
Q Consensus 125 ~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~vv~~ 204 (415)
.++.++.+.. .| -.+|...+...+..+...+.. ...++|++...+|-... .....++++..|+..+..
T Consensus 628 ~p~~~a~~~~-~~-------~~~Ty~el~~~~~~~a~~L~~---~~~~g~~V~i~~~n~~~-~~~~~la~~~~G~v~v~l 695 (1146)
T PRK08633 628 NWSRLAVADS-TG-------GELSYGKALTGALALARLLKR---ELKDEENVGILLPPSVA-GALANLALLLAGKVPVNL 695 (1146)
T ss_pred cCCCcEEEcC-CC-------CcCcHHHHHHHHHHHHHHHHH---hCCCCCeEEEECCCchH-HHHHHHHHHHcCCEEEEe
Confidence 5677776532 11 257889888888777665532 25788999888877642 233467888899988877
Q ss_pred CC--CHHHHHHHHHhhCCeEEEeCcHHHHHH
Q 014951 205 RG--DVRYLMEDIQELKPTMFSGVPRVYDRI 233 (415)
Q Consensus 205 ~~--~~~~~~~~i~~~~~t~~~~~P~~~~~l 233 (415)
.. .++++...+++.+++.+...+...+.+
T Consensus 696 ~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~ 726 (1146)
T PRK08633 696 NYTASEAALKSAIEQAQIKTVITSRKFLEKL 726 (1146)
T ss_pred CCCcCHHHHHHHHHHcCCCEEEEcHHHHHHH
Confidence 65 789999999999999999888766654
No 259
>PRK09331 Sep-tRNA:Cys-tRNA synthetase; Provisional
Probab=30.95 E-value=1.6e+02 Score=27.57 Aligned_cols=56 Identities=13% Similarity=0.134 Sum_probs=36.4
Q ss_pred CCCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCC------CCCHHHHHHHHHhc------CceEEEEcC
Q 014951 6 VNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYD------TLGANAVEFIINHA------EVSIAFVQE 64 (415)
Q Consensus 6 v~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~------~~~~~~l~~~l~~~------~~~~ii~~~ 64 (415)
+++||.|.+.... +...+.++...|+.++.++. ..+.+.+...++.. ++++|+.+.
T Consensus 99 ~~~gd~Vlv~~~~---h~s~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lV~l~~ 166 (387)
T PRK09331 99 CKKGDYVVLDGLA---HYTSYVAAERAGLNVREVPKTGYPEYKITPEAYAEKIEEVKEETGKPPALALLTH 166 (387)
T ss_pred cCCCCEEEECCCc---hHHHHHHHHHcCCEEEEEeCccCcCCCcCHHHHHHHHHHhhhccCCCCEEEEEEC
Confidence 4789988775332 23334466778888877754 15678888887653 677777653
No 260
>PRK13390 acyl-CoA synthetase; Provisional
Probab=30.83 E-value=5e+02 Score=25.10 Aligned_cols=82 Identities=4% Similarity=-0.065 Sum_probs=61.7
Q ss_pred EEeecHHHHHHhhhhhhhhhhccccCCCCCEEEEeCChhhHHHHHHHHHhhhcCcEEEEeCC--CHHHHHHHHHhhCCeE
Q 014951 145 VVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTM 222 (415)
Q Consensus 145 v~~th~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~vv~~~~--~~~~~~~~i~~~~~t~ 222 (415)
..+|...+...+..+...+.. ..+.++|++....+-+. ..+..+++++..|+..+.... .+.++...++..++..
T Consensus 23 ~~lTy~el~~~~~~la~~L~~--~gv~~gd~V~i~~~n~~-~~~~~~la~~~~Ga~~~~l~~~~~~~~~~~~~~~~~~~~ 99 (501)
T PRK13390 23 EQVSYRQLDDDSAALARVLYD--AGLRTGDVVALLSDNSP-EALVVLWAALRSGLYITAINHHLTAPEADYIVGDSGARV 99 (501)
T ss_pred eEeeHHHHHHHHHHHHHHHHH--cCCCCCCEEEEEeCCCH-HHHHHHHHHHHhCCEEeccccCCCHHHHHHHHHhcCCcE
Confidence 368999998888887766532 36788999988877654 233357778889998887765 7889999999999988
Q ss_pred EEeCcHH
Q 014951 223 FSGVPRV 229 (415)
Q Consensus 223 ~~~~P~~ 229 (415)
+......
T Consensus 100 ~i~~~~~ 106 (501)
T PRK13390 100 LVASAAL 106 (501)
T ss_pred EEEcchh
Confidence 8776543
No 261
>PLN00011 cysteine synthase
Probab=30.80 E-value=2.5e+02 Score=25.66 Aligned_cols=59 Identities=7% Similarity=0.032 Sum_probs=45.4
Q ss_pred CCCC-CeEEEEcCCcHhHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEcCC
Q 014951 6 VNPG-DRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQEN 65 (415)
Q Consensus 6 v~~g-d~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~ii~~~~ 65 (415)
+.|| +.|.. ...+-.-..+.++|..+|..+..+-|...+......++..++++++++..
T Consensus 65 ~~~g~~~vv~-aSsGN~g~alA~~a~~~G~~~~ivvp~~~~~~k~~~i~~~GA~V~~~~~~ 124 (323)
T PLN00011 65 ITPGKSTLIE-ATAGNTGIGLACIGAARGYKVILVMPSTMSLERRIILRALGAEVHLTDQS 124 (323)
T ss_pred CCCCCcEEEE-eCCChHHHHHHHHHHHcCCeEEEEeCCCCCHHHHHHHHHcCCEEEEECCC
Confidence 5677 55544 55566666677788889998888777666678888999999999998864
No 262
>cd01561 CBS_like CBS_like: This subgroup includes Cystathionine beta-synthase (CBS) and Cysteine synthase. CBS is a unique heme-containing enzyme that catalyzes a pyridoxal 5'-phosphate (PLP)-dependent condensation of serine and homocysteine to give cystathionine. Deficiency of CBS leads to homocystinuria, an inherited disease of sulfur metabolism characterized by increased levels of the toxic metabolite homocysteine. Cysteine synthase on the other hand catalyzes the last step of cysteine biosynthesis. This subgroup also includes an O-Phosphoserine sulfhydrylase found in hyperthermophilic archaea which produces L-cysteine from sulfide and the more thermostable O-phospho-L-serine.
Probab=30.77 E-value=2.4e+02 Score=25.13 Aligned_cols=59 Identities=7% Similarity=0.055 Sum_probs=44.8
Q ss_pred CCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEcCCC
Q 014951 7 NPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENK 66 (415)
Q Consensus 7 ~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~ii~~~~~ 66 (415)
++|+.|.. ...+-.-..+.++|...|..+..+-|...+......++..++++++++...
T Consensus 51 ~~~~~vv~-~SsGN~g~alA~~a~~~G~~~~i~vp~~~~~~k~~~~~~~Ga~v~~~~~~~ 109 (291)
T cd01561 51 KPGTTIIE-PTSGNTGIGLAMVAAAKGYRFIIVMPETMSEEKRKLLRALGAEVILTPEAE 109 (291)
T ss_pred CCCCEEEE-eCCChHHHHHHHHHHHcCCeEEEEECCCCCHHHHHHHHHcCCEEEEeCCCC
Confidence 35666554 555666667778888999988887776666667788999999999998764
No 263
>PLN02430 long-chain-fatty-acid-CoA ligase
Probab=30.54 E-value=4.1e+02 Score=27.11 Aligned_cols=83 Identities=6% Similarity=-0.113 Sum_probs=62.4
Q ss_pred EeecHHHHHHhhhhhhhhhhccccCCCCCEEEEeCChhhHHHHHHHHHhhhcCcEEEEeCC--CHHHHHHHHHhhCCeEE
Q 014951 146 VLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTMF 223 (415)
Q Consensus 146 ~~th~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~vv~~~~--~~~~~~~~i~~~~~t~~ 223 (415)
.+|...+...+..+...+. ..++.++|++..+++-..- .....++++..|+..+.... .++++...++..+++.+
T Consensus 76 ~~Ty~el~~~v~~lA~~L~--~~Gv~~gd~V~i~~~n~~e-w~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~~~~~~v 152 (660)
T PLN02430 76 WKTYKEVYEEVLQIGSALR--ASGAEPGSRVGIYGSNCPQ-WIVAMEACAAHSLICVPLYDTLGPGAVDYIVDHAEIDFV 152 (660)
T ss_pred EEEHHHHHHHHHHHHHHHH--HcCCCCCCEEEEEcCCCHH-HHHHHHHHHHcCCeEEEeccCCCHHHHHHHHhccCCCEE
Confidence 4688988888887766542 2367889999888776532 23346778888988887655 88999999999999999
Q ss_pred EeCcHHHH
Q 014951 224 SGVPRVYD 231 (415)
Q Consensus 224 ~~~P~~~~ 231 (415)
+.....+.
T Consensus 153 ~~~~~~~~ 160 (660)
T PLN02430 153 FVQDKKIK 160 (660)
T ss_pred EECHHHHH
Confidence 98765443
No 264
>PRK07786 long-chain-fatty-acid--CoA ligase; Validated
Probab=30.08 E-value=3.7e+02 Score=26.45 Aligned_cols=85 Identities=5% Similarity=-0.184 Sum_probs=63.1
Q ss_pred EeecHHHHHHhhhhhhhhhhccccCCCCCEEEEeCChhhHHHHHHHHHhhhcCcEEEEeCC--CHHHHHHHHHhhCCeEE
Q 014951 146 VLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTMF 223 (415)
Q Consensus 146 ~~th~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~vv~~~~--~~~~~~~~i~~~~~t~~ 223 (415)
.+|...+......+...+. ..++..++++..+.+-... ....+++++..|+..+.... .+.++...+++.++..+
T Consensus 42 ~~ty~~l~~~~~~~a~~L~--~~g~~~g~~V~i~~~~~~~-~~~~~~a~~~~G~~~vpl~~~~~~~~~~~~l~~~~~~~i 118 (542)
T PRK07786 42 TTTWRELDDRVAALAGALS--RRGVGFGDRVLILMLNRTE-FVESVLAANMLGAIAVPVNFRLTPPEIAFLVSDCGAHVV 118 (542)
T ss_pred cccHHHHHHHHHHHHHHHH--HcCCCCCCEEEEECCCCHH-HHHHHHHHHHcCeEEEEcCccCCHHHHHHHHHhCCCcEE
Confidence 6888888888777666543 2367788998887775433 23357778888999887765 78899999999999999
Q ss_pred EeCcHHHHHH
Q 014951 224 SGVPRVYDRI 233 (415)
Q Consensus 224 ~~~P~~~~~l 233 (415)
+..+.....+
T Consensus 119 i~~~~~~~~~ 128 (542)
T PRK07786 119 VTEAALAPVA 128 (542)
T ss_pred EEccchHHHH
Confidence 8877665443
No 265
>PTZ00342 acyl-CoA synthetase; Provisional
Probab=30.01 E-value=4.1e+02 Score=27.74 Aligned_cols=105 Identities=14% Similarity=0.172 Sum_probs=72.1
Q ss_pred CCCeEEEEecCCCCCCCceEEeecHHHHHHhhhhhhhhhhc-cccCCCC-----------CEEEEeCChhhHHHHHHHHH
Q 014951 126 KTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVT-GKVCSEE-----------DTYFSFLPLAHIYDQIIETH 193 (415)
Q Consensus 126 ~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~~~~~~~~~~-~~~~~~~-----------d~~l~~~p~~~~~~~~~~~~ 193 (415)
++.+|++....|. + -..+|...+...+..+...+... ..++.++ |++..+++-. .-.+...++
T Consensus 75 p~~~Al~~~~~g~---~-~~~~Ty~el~~~v~~~A~~L~~~~~~Gv~~g~~~~~~~~g~~d~V~i~~~N~-~ew~~~~lA 149 (746)
T PTZ00342 75 NNKIAIVEHSCGE---P-QNYITYGNFFKKVLSFSHSLNTYEGKGIPEKKYNEEQNNGKFKLLGLYGSNS-INWLVADLA 149 (746)
T ss_pred CCceeEeccCCCC---C-ceeeeHHHHHHHHHHHHHHHHHHhhcCCCcCccccccccccccEEEEEcCCC-HHHHHHHHH
Confidence 5666765322221 1 24689998888888776655311 1245555 7887777654 233445778
Q ss_pred hhhcCcEEEEeCC--CHHHHHHHHHhhCCeEEEeCcHHHHHHHH
Q 014951 194 CIHKGCSIGFWRG--DVRYLMEDIQELKPTMFSGVPRVYDRIYT 235 (415)
Q Consensus 194 ~l~~G~~vv~~~~--~~~~~~~~i~~~~~t~~~~~P~~~~~l~~ 235 (415)
++..|+..+.... .++++...++..++.+++..+..+..+.+
T Consensus 150 ~~~~Gav~Vpl~~~~~~~el~~il~~s~~~~lv~~~~~~~~l~~ 193 (746)
T PTZ00342 150 CMLSGVTTLVMHSKFSIDVIVDILNETKLEWLCLDLDLVEGLLE 193 (746)
T ss_pred HHHcCCeEEEecCCCCHHHHHHHHhcCCCCEEEEcHHHHHHHHH
Confidence 8889999887755 89999999999999999988777776654
No 266
>TIGR00649 MG423 conserved hypothetical protein. Contains an ATP-binding domain at the N-terminal end of the protein. Possibly part of a superfamily of beta-lactmases
Probab=29.70 E-value=2.2e+02 Score=27.15 Aligned_cols=61 Identities=7% Similarity=0.036 Sum_probs=42.6
Q ss_pred CCCCCCeEEEEcCCcHhHH----HHHH--HHHHcCCEE---EecCCCCCHHHHHHHHHhcCceEEEEcCC
Q 014951 5 GVNPGDRCGIYGSNCPEWI----IAME--ACNSQAITY---VPLYDTLGANAVEFIINHAEVSIAFVQEN 65 (415)
Q Consensus 5 Gv~~gd~V~l~~~n~~~~~----~~~l--A~~~~G~~~---~~l~~~~~~~~l~~~l~~~~~~~ii~~~~ 65 (415)
-+++||.|.+.++..+..- ..++ .+.+.|+.+ ...+...+.+++..+++..+|+.+|.--.
T Consensus 315 ~l~~~d~vi~s~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~h~SgHa~~~dl~~~i~~~~Pk~~ipvHg 384 (422)
T TIGR00649 315 RIRKGDTVVFSAPPIPGNENIAVSILLDIRLNEVGARVIKRIHVSGHASQEDHKLLLRLLKPKYIIPVHG 384 (422)
T ss_pred EeCCCCEEEEECCCCCcHHHHHHHHHHHHHHHhcCCEEEeceEecCCCCHHHHHHHHHHhCCCEEEecCC
Confidence 3568999999986554222 2222 366788865 34566778899999999999998875443
No 267
>PRK08574 cystathionine gamma-synthase; Provisional
Probab=29.33 E-value=1.6e+02 Score=27.66 Aligned_cols=26 Identities=12% Similarity=-0.107 Sum_probs=13.9
Q ss_pred HHHHHHHHHhcCC-ceEEeeccCCCCc
Q 014951 304 IHVEEFLRVTSGA-PLTQGYGLTESCS 329 (415)
Q Consensus 304 ~~~~~~~~~~~~~-~~~~~yG~tE~~~ 329 (415)
.+....|.+.+.. .+-..+|.+|+..
T Consensus 310 ~~~~~~~~~~l~l~~~~~s~G~~~sl~ 336 (385)
T PRK08574 310 RDAVLKFLRSLKLIKPSPSLGGVESLA 336 (385)
T ss_pred HHHHHHHHHcCCcceEccCCCCCccee
Confidence 3444444444443 3455677777654
No 268
>PRK09422 ethanol-active dehydrogenase/acetaldehyde-active reductase; Provisional
Probab=29.10 E-value=2.3e+02 Score=25.74 Aligned_cols=57 Identities=14% Similarity=0.205 Sum_probs=38.7
Q ss_pred CCCCCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEc
Q 014951 4 RGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQ 63 (415)
Q Consensus 4 ~Gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~ii~~ 63 (415)
.++++|++|+|......-.+++.+|....|+.++.+.. +.+.. ..++..+.+.++..
T Consensus 158 ~~~~~g~~vlV~g~g~vG~~~~~la~~~~g~~v~~~~~--~~~~~-~~~~~~g~~~v~~~ 214 (338)
T PRK09422 158 SGIKPGQWIAIYGAGGLGNLALQYAKNVFNAKVIAVDI--NDDKL-ALAKEVGADLTINS 214 (338)
T ss_pred cCCCCCCEEEEECCcHHHHHHHHHHHHhCCCeEEEEeC--ChHHH-HHHHHcCCcEEecc
Confidence 56899999999986667788888877766877666643 33333 33466666665543
No 269
>PRK06710 long-chain-fatty-acid--CoA ligase; Validated
Probab=29.06 E-value=3e+02 Score=27.22 Aligned_cols=83 Identities=12% Similarity=-0.002 Sum_probs=62.1
Q ss_pred EeecHHHHHHhhhhhhhhhhccccCCCCCEEEEeCChhhHHHHHHHHHhhhcCcEEEEeCC--CHHHHHHHHHhhCCeEE
Q 014951 146 VLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTMF 223 (415)
Q Consensus 146 ~~th~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~vv~~~~--~~~~~~~~i~~~~~t~~ 223 (415)
.+|...+...+..+...+. ...++.+|++...++-..- .+...++++..|+..+.... ...++...++..+++.+
T Consensus 49 ~~ty~eL~~~~~~la~~L~--~~gv~~gd~V~i~~~~~~~-~~~~~lA~~~~G~~~vpi~p~~~~~~l~~~l~~~~~~~i 125 (563)
T PRK06710 49 DITFSVFHDKVKRFANYLQ--KLGVEKGDRVAIMLPNCPQ-AVIGYYGTLLAGGIVVQTNPLYTERELEYQLHDSGAKVI 125 (563)
T ss_pred eecHHHHHHHHHHHHHHHH--HcCCCCCCEEEEECCCChH-HHHHHHHHHHcCeEEeccCcccCHHHHHHHHhccCCeEE
Confidence 5888888888877766542 2356788999888777543 23457778888988887655 78899999999999999
Q ss_pred EeCcHHHH
Q 014951 224 SGVPRVYD 231 (415)
Q Consensus 224 ~~~P~~~~ 231 (415)
...+....
T Consensus 126 i~~~~~~~ 133 (563)
T PRK06710 126 LCLDLVFP 133 (563)
T ss_pred EEeccchh
Confidence 88775443
No 270
>cd01449 TST_Repeat_2 Thiosulfate sulfurtransferase (TST), C-terminal, catalytic domain. TST contains 2 copies of the Rhodanese Homology Domain; this is the second repeat. Only the second repeat contains the catalytically active Cys residue.
Probab=28.92 E-value=66 Score=23.91 Aligned_cols=33 Identities=12% Similarity=0.137 Sum_probs=26.8
Q ss_pred cCCCCCCCeEEEEcCCcHhHHHHHHHHHHcCCE
Q 014951 3 SRGVNPGDRCGIYGSNCPEWIIAMEACNSQAIT 35 (415)
Q Consensus 3 ~~Gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~ 35 (415)
..|+.+++.|.++|..+.....+.+.+..+|..
T Consensus 72 ~~~~~~~~~iv~yc~~g~~s~~~~~~l~~~G~~ 104 (118)
T cd01449 72 ALGITPDKPVIVYCGSGVTACVLLLALELLGYK 104 (118)
T ss_pred HcCCCCCCCEEEECCcHHHHHHHHHHHHHcCCC
Confidence 357888999999999888777778888888863
No 271
>PLN03051 acyl-activating enzyme; Provisional
Probab=28.87 E-value=1.6e+02 Score=28.77 Aligned_cols=69 Identities=9% Similarity=-0.087 Sum_probs=50.9
Q ss_pred CCCCCCCeEEEEcCCcHh-HHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEcCCChhhhhh
Q 014951 4 RGVNPGDRCGIYGSNCPE-WIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILS 72 (415)
Q Consensus 4 ~Gv~~gd~V~l~~~n~~~-~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~ 72 (415)
.+++++|++...+|-+-. ....+++++..|+.++.......++.+...+++.++.++.........+.+
T Consensus 155 ~~~~~~d~~l~~~pl~h~~g~~~~~~~l~~G~t~v~~~~~~~~~~~~~~i~~~~vt~~~~vP~~~~~l~~ 224 (499)
T PLN03051 155 MDIQPGDVVCWPTNLGWMMGPWLLYSAFLNGATLALYGGAPLGRGFGKFVQDAGVTVLGLVPSIVKAWRH 224 (499)
T ss_pred cCCCCCCEEEEccCcceeeehHHHHHHHHcCCEEEecCCCCCcHHHHHHHHHhCCcEEEeCHHHHHHHHh
Confidence 478889988776664321 123567888999999877655667888999999999999988776655543
No 272
>TIGR01138 cysM cysteine synthase B. Alternate name: O-acetylserine (thiol)-lyase
Probab=28.78 E-value=2.8e+02 Score=24.86 Aligned_cols=58 Identities=10% Similarity=0.025 Sum_probs=43.7
Q ss_pred CCCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEcC
Q 014951 6 VNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQE 64 (415)
Q Consensus 6 v~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~ii~~~ 64 (415)
+.+|+.|.- ...+-.-....++|.+.|..+..+-|...+......++..++++++++.
T Consensus 56 ~~~g~~vv~-aSsGN~g~alA~~a~~~G~~~~i~~p~~~~~~k~~~~~~~GA~v~~v~~ 113 (290)
T TIGR01138 56 IKPGDVLIE-ATSGNTGIALAMIAALKGYRMKLLMPDNMSQERKAAMRAYGAELILVTK 113 (290)
T ss_pred CCCCCEEEE-ECCChHHHHHHHHHHHcCCeEEEEECCCCCHHHHHHHHHcCCEEEEeCC
Confidence 367777655 4445555666677888999888877776667777889999999999875
No 273
>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]
Probab=28.71 E-value=3.4e+02 Score=26.32 Aligned_cols=85 Identities=18% Similarity=0.053 Sum_probs=55.6
Q ss_pred cCCCCCEEEEeCChhhHHHHHHHHHhhhcCcEEEEeCC-----CHHHHHHHHHhhCCeEEEeCcHHHHHHHHHHHHhhhc
Q 014951 169 VCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG-----DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISS 243 (415)
Q Consensus 169 ~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~vv~~~~-----~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~ 243 (415)
..+++|+++.-.|-|+..-..+ -..|..++-++- +++.+-+.+++++|..++.+|++-.=.-. .=
T Consensus 175 l~~pGd~v~vE~PtY~~~~~~~----~~~g~~~~~vp~d~~G~~~e~le~~~~~~~~k~~y~~P~~qNPtG~------tm 244 (459)
T COG1167 175 LLDPGDTVLVEDPTYPGALQAL----EALGARVIPVPVDEDGIDPEALEEALAQWKPKAVYVTPTFQNPTGV------TM 244 (459)
T ss_pred hCCCCCEEEEcCCCcHHHHHHH----HHcCCcEEecCCCCCCCCHHHHHHHHhhcCCcEEEECCCCCCCCCC------cc
Confidence 4568999999999887543332 334667665532 89999999999999999999976322110 00
Q ss_pred CChhhHHHHHHHHHhhhhcc
Q 014951 244 GGALSKKLFEFAYNYKLGNM 263 (415)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~ 263 (415)
.....+.+.++|.++++-.+
T Consensus 245 s~~rR~~Ll~lA~~~~~~II 264 (459)
T COG1167 245 SLERRKALLALAEKYDVLII 264 (459)
T ss_pred CHHHHHHHHHHHHHcCCeEE
Confidence 11234556777766665444
No 274
>KOG1250 consensus Threonine/serine dehydratases [Amino acid transport and metabolism]
Probab=28.66 E-value=1.9e+02 Score=27.11 Aligned_cols=52 Identities=10% Similarity=-0.111 Sum_probs=43.8
Q ss_pred EcCCcHhHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEcCCC
Q 014951 15 YGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENK 66 (415)
Q Consensus 15 ~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~ii~~~~~ 66 (415)
++.-+-....+.+|+.++|+.+..+-|..++...-..+++.++.+++..+..
T Consensus 119 asSaGNha~a~Ayaa~~LgipaTIVmP~~tp~~kiq~~~nlGA~Vil~G~~~ 170 (457)
T KOG1250|consen 119 ASSAGNHAQAAAYAARKLGIPATIVMPVATPLMKIQRCRNLGATVILSGEDW 170 (457)
T ss_pred EecCccHHHHHHHHHHhcCCceEEEecCCChHHHHHHHhccCCEEEEecccH
Confidence 3444455667889999999999999999999999999999999999987654
No 275
>cd06447 D-Ser-dehyd D-Serine dehydratase is a pyridoxal phosphate (PLP)-dependent enzyme which catalyzes the conversion of L- or D-serine to pyruvate and ammonia. D-serine dehydratase serves as a detoxifying enzyme in most E. coli strains where D-serine is a competitive antagonist of beta-alanine in the biosynthetic pathway to pentothenate and coenzyme A. D-serine dehydratase is different from other pyridoxal-5'-phosphate-dependent enzymes in that it catalyzes alpha, beta-elimination reactions on amino acids.
Probab=28.10 E-value=2.8e+02 Score=26.35 Aligned_cols=57 Identities=5% Similarity=-0.148 Sum_probs=44.4
Q ss_pred EEEEcCCcHhHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEcCCChh
Q 014951 12 CGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIP 68 (415)
Q Consensus 12 V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~ 68 (415)
-.+....+-.-..+.++|...|..+..+-|...+.+-...++..++++++++.....
T Consensus 136 ~VV~aSsGN~G~alA~~a~~~G~~~~IvvP~~~~~~K~~~ira~GAeVv~v~~~~~~ 192 (404)
T cd06447 136 SIAVGSTGNLGLSIGIMAAALGFKVTVHMSADAKQWKKDKLRSKGVTVVEYETDYSK 192 (404)
T ss_pred EEEEECccHHHHHHHHHHHHcCCCEEEEECCCCcHHHHHHHHHCCCEEEEECCCHHH
Confidence 345555566666778889999998888877777788888899999999999865443
No 276
>PRK04813 D-alanine--poly(phosphoribitol) ligase subunit 1; Provisional
Probab=28.06 E-value=2.9e+02 Score=26.64 Aligned_cols=80 Identities=9% Similarity=-0.017 Sum_probs=58.6
Q ss_pred EeecHHHHHHhhhhhhhhhhccccCCCCCEEEEeCChhhHHHHHHHHHhhhcCcEEEEeCC--CHHHHHHHHHhhCCeEE
Q 014951 146 VLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTMF 223 (415)
Q Consensus 146 ~~th~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~vv~~~~--~~~~~~~~i~~~~~t~~ 223 (415)
.+|+..+...+..+...+.. ....+++++....+-... .....++++..|+..+.... ...++...++..++..+
T Consensus 27 ~~t~~~l~~~~~~~a~~l~~--~g~~~~~~v~~~~~~~~~-~~~~~~a~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 103 (503)
T PRK04813 27 KLTYGQLKEDSDALAAFIDS--LKLPDKSPIIVFGHMSPE-MLATFLGAVKAGHAYIPVDVSSPAERIEMIIEVAKPSLI 103 (503)
T ss_pred EEeHHHHHHHHHHHHHHHHH--hCCCCCCEEEEEcCCCHH-HHHHHHHHHHcCCEEecCCCCChHHHHHHHHHhcCCCEE
Confidence 58999998888777665432 255678998888775432 33456777888998887765 77888888999999998
Q ss_pred EeCcH
Q 014951 224 SGVPR 228 (415)
Q Consensus 224 ~~~P~ 228 (415)
+....
T Consensus 104 ~~~~~ 108 (503)
T PRK04813 104 IATEE 108 (503)
T ss_pred Eeccc
Confidence 87543
No 277
>PRK07476 eutB threonine dehydratase; Provisional
Probab=28.05 E-value=2.1e+02 Score=26.03 Aligned_cols=50 Identities=12% Similarity=-0.056 Sum_probs=39.2
Q ss_pred CCcHhHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEcCCC
Q 014951 17 SNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENK 66 (415)
Q Consensus 17 ~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~ii~~~~~ 66 (415)
..+-.-..+.++|...|..+..+-|...+......++..++++++++...
T Consensus 74 SsGN~g~alA~~a~~~G~~~~i~vp~~~~~~k~~~~~~~GA~V~~~~~~~ 123 (322)
T PRK07476 74 STGNHGRALAYAARALGIRATICMSRLVPANKVDAIRALGAEVRIVGRSQ 123 (322)
T ss_pred CCChHHHHHHHHHHHhCCCEEEEeCCCCCHHHHHHHHHcCCEEEEECCCH
Confidence 44555666677888999988877777676777788999999999998653
No 278
>PF03790 KNOX1: KNOX1 domain ; InterPro: IPR005540 The MEINOX region is comprised of two domains, KNOX1 and KNOX2. KNOX1 plays a role in suppressing target gene expression. KNOX2, essential for function, is thought to be necessary for homo-dimerization [].; GO: 0003677 DNA binding, 0005634 nucleus
Probab=27.97 E-value=55 Score=19.86 Aligned_cols=18 Identities=17% Similarity=0.290 Sum_probs=15.3
Q ss_pred CcHhHHHHHHHHHHcCCE
Q 014951 18 NCPEWIIAMEACNSQAIT 35 (415)
Q Consensus 18 n~~~~~~~~lA~~~~G~~ 35 (415)
--++++.+++.|.+.|+.
T Consensus 12 ~Y~~Ll~Ayi~C~KVGAP 29 (45)
T PF03790_consen 12 LYPRLLAAYIDCQKVGAP 29 (45)
T ss_pred CcHHHHHHHHHHHhcCCC
Confidence 347899999999999975
No 279
>PRK14665 mnmA tRNA-specific 2-thiouridylase MnmA; Provisional
Probab=27.58 E-value=2.6e+02 Score=26.11 Aligned_cols=59 Identities=5% Similarity=-0.115 Sum_probs=43.6
Q ss_pred CCCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCCC-----CC---HHHHHHHHHhcCceEEEEcC
Q 014951 6 VNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDT-----LG---ANAVEFIINHAEVSIAFVQE 64 (415)
Q Consensus 6 v~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~~-----~~---~~~l~~~l~~~~~~~ii~~~ 64 (415)
++++++|++.+.-+++..++..-+...|.-++.+.-. .+ .+..+.+.+..+....+.+-
T Consensus 2 ~~~~~kVlValSGGVDSsvaa~LL~~~G~~V~~v~~~~~~~~~~~~d~~~a~~va~~LgIp~~vvd~ 68 (360)
T PRK14665 2 MEKNKRVLLGMSGGTDSSVAAMLLLEAGYEVTGVTFRFYEFNGSTEYLEDARALAERLGIGHITYDA 68 (360)
T ss_pred CCCCCEEEEEEcCCHHHHHHHHHHHHcCCeEEEEEEecCCCCCChHHHHHHHHHHHHhCCCEEEEec
Confidence 5789999999999999999999888888766544211 12 23356777778888777654
No 280
>TIGR02080 O_succ_thio_ly O-succinylhomoserine (thiol)-lyase. This family consists of O-succinylhomoserine (thiol)-lyase, one of three different enzymes designated cystathionine gamma-synthase and involved in methionine biosynthesis. In all three cases, sulfur is added by transsulfuration from Cys to yield cystathionine rather than by a sulfhydrylation step that uses H2S directly and bypasses cystathionine.
Probab=27.54 E-value=1.9e+02 Score=27.12 Aligned_cols=25 Identities=16% Similarity=0.009 Sum_probs=12.8
Q ss_pred HHHHHHHHhcCC-ceEEeeccCCCCc
Q 014951 305 HVEEFLRVTSGA-PLTQGYGLTESCS 329 (415)
Q Consensus 305 ~~~~~~~~~~~~-~~~~~yG~tE~~~ 329 (415)
+....|.+.+.. .+-..+|..|+..
T Consensus 308 ~~~~~f~~~l~~~~~~~s~G~~~sl~ 333 (382)
T TIGR02080 308 QTVRRFLGGLSLFTLAESLGGVESLI 333 (382)
T ss_pred HHHHHHHHcCCcceEeccCCCCccee
Confidence 333344444443 4455677777654
No 281
>PRK06234 methionine gamma-lyase; Provisional
Probab=27.38 E-value=2.2e+02 Score=26.97 Aligned_cols=25 Identities=12% Similarity=0.038 Sum_probs=14.1
Q ss_pred HHHHHHHHhcCC-ceEEeeccCCCCc
Q 014951 305 HVEEFLRVTSGA-PLTQGYGLTESCS 329 (415)
Q Consensus 305 ~~~~~~~~~~~~-~~~~~yG~tE~~~ 329 (415)
+....|.+.+.. .+-..+|.+|+..
T Consensus 324 ~~~~~f~~~l~~~~~~~s~G~~~sl~ 349 (400)
T PRK06234 324 EEGKVVMNNVKLATLAVSLGDAETLI 349 (400)
T ss_pred HHHHHHHHhCCcceEeccCCCCCcee
Confidence 333445444543 4566778888654
No 282
>PF00667 FAD_binding_1: FAD binding domain; InterPro: IPR003097 This domain is found in sulphite reductase, NADPH cytochrome P450 reductase, nitric oxide synthase and methionine synthase reductase. Flavoprotein pyridine nucleotide cytochrome reductases [] (FPNCR) catalyse the interchange of reducing equivalents between one-electron carriers and the two-electron-carrying nicotinamide dinucleotides. The enzymes include ferredoxin:NADP+reductases (FNR) [], plant and fungal NAD(P)H:nitrate reductases [, ], NADH:cytochrome b5 reductases [], NADPH:P450 reductases [], NADPH:sulphite reductases [], nitric oxide synthases [], phthalate dioxygenase reductase [], and various other flavoproteins.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3QFR_B 3FJO_A 3QFC_B 3QE2_B 3QFS_A 3QFT_A 2B5O_B 2QTZ_A 2QTL_A 2BPO_B ....
Probab=27.29 E-value=70 Score=27.24 Aligned_cols=29 Identities=28% Similarity=0.398 Sum_probs=20.7
Q ss_pred CCCCCCeEEEEcCCcHhHHHHHHHHHHcC
Q 014951 5 GVNPGDRCGIYGSNCPEWIIAMEACNSQA 33 (415)
Q Consensus 5 Gv~~gd~V~l~~~n~~~~~~~~lA~~~~G 33 (415)
-.++||.++|+-+|..+.+-.++..+.+.
T Consensus 41 ~Y~pGD~l~V~P~N~~~~V~~~l~~lgl~ 69 (219)
T PF00667_consen 41 SYQPGDHLGVYPPNDPEEVERLLKRLGLD 69 (219)
T ss_dssp ---TT-EEEEE-SSEHHHHHHHHHHHTSG
T ss_pred cccCCCEEEEEccCCHHHHHHHHHHhCCC
Confidence 35899999999999999998888776553
No 283
>TIGR02035 D_Ser_am_lyase D-serine ammonia-lyase. This family consists of D-serine ammonia-lyase (EC 4.3.1.18), a pyridoxal-phosphate enzyme that converts D-serine to pyruvate and NH3. This enzyme is also called D-serine dehydratase and D-serine deaminase and was previously designated EC 4.2.1.14. It is homologous to an enzyme that acts on threonine and may itself act weakly on threonine.
Probab=27.08 E-value=2.8e+02 Score=26.60 Aligned_cols=58 Identities=5% Similarity=-0.163 Sum_probs=44.7
Q ss_pred EEEEcCCcHhHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEcCCChhh
Q 014951 12 CGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPS 69 (415)
Q Consensus 12 V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~ 69 (415)
-.+....+-.-..+.++|..+|..+..+-|...+..-...++..+++++++...+...
T Consensus 154 ~Vv~aSsGN~G~slA~~Aa~lG~~~~IvmP~~a~~~K~~~ir~~GAeVv~~~~~~~~a 211 (431)
T TIGR02035 154 SIAVGSTGNLGLSIGIISAALGFQVTVHMSADAKQWKKDKLRSKGVTVVEYESDYGVA 211 (431)
T ss_pred eEEEECccHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHcCCEEEEECCCHHHH
Confidence 3444455556666778888999988888787788888889999999999998765443
No 284
>PRK12492 long-chain-fatty-acid--CoA ligase; Provisional
Probab=26.88 E-value=5.3e+02 Score=25.50 Aligned_cols=86 Identities=8% Similarity=-0.036 Sum_probs=62.5
Q ss_pred EEeecHHHHHHhhhhhhhhhhccccCCCCCEEEEeCChhhHHHHHHHHHhhhcCcEEEEeCC--CHHHHHHHHHhhCCeE
Q 014951 145 VVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTM 222 (415)
Q Consensus 145 v~~th~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~vv~~~~--~~~~~~~~i~~~~~t~ 222 (415)
..+|...+......+...+... ..+.++|++..+++-.. .....+++++..|+..+.... ...++...+++.++..
T Consensus 48 ~~~Ty~~l~~~~~~~a~~L~~~-~gi~~gd~V~i~~~n~~-e~~~~~la~~~~G~v~v~~~~~~~~~~l~~~l~~~~~~~ 125 (562)
T PRK12492 48 VTLSYAELERHSAAFAAYLQQH-TDLVPGDRIAVQMPNVL-QYPIAVFGALRAGLIVVNTNPLYTAREMRHQFKDSGARA 125 (562)
T ss_pred ceeeHHHHHHHHHHHHHHHHHh-cCCCCCCEEEEECCCCH-HHHHHHHHHHHcCeEEeccCccCCHHHHHHHHhccCceE
Confidence 3689998888877776654210 15678899988877654 334456778888988887765 8899999999999999
Q ss_pred EEeCcHHHHH
Q 014951 223 FSGVPRVYDR 232 (415)
Q Consensus 223 ~~~~P~~~~~ 232 (415)
+...+.+.+.
T Consensus 126 ~i~~~~~~~~ 135 (562)
T PRK12492 126 LVYLNMFGKL 135 (562)
T ss_pred EEeccccchH
Confidence 8877654443
No 285
>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase. Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.
Probab=26.74 E-value=2.1e+02 Score=26.33 Aligned_cols=55 Identities=13% Similarity=0.148 Sum_probs=36.3
Q ss_pred CCCCCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEE
Q 014951 4 RGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFV 62 (415)
Q Consensus 4 ~Gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~ii~ 62 (415)
.++++|++|+|...-..-..++.+|-. .|+.++.++. +++.+. ++...+++.+|.
T Consensus 162 ~~~~~g~~VlV~G~G~vG~~a~~~a~~-~G~~vi~~~~--~~~~~~-~~~~~Ga~~~i~ 216 (349)
T TIGR03201 162 AGLKKGDLVIVIGAGGVGGYMVQTAKA-MGAAVVAIDI--DPEKLE-MMKGFGADLTLN 216 (349)
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHH-cCCeEEEEcC--CHHHHH-HHHHhCCceEec
Confidence 578899999999985667776666665 4776555543 445554 445667666553
No 286
>cd01519 RHOD_HSP67B2 Member of the Rhodanese Homology Domain superfamily. This CD includes the heat shock protein 67B2 of Drosophila melanogaster and other similar proteins, many of which are uncharacterized.
Probab=26.56 E-value=1.4e+02 Score=21.57 Aligned_cols=32 Identities=13% Similarity=-0.063 Sum_probs=25.6
Q ss_pred CCCCCCCeEEEEcCCcHhHHHHHHHHHHcCCE
Q 014951 4 RGVNPGDRCGIYGSNCPEWIIAMEACNSQAIT 35 (415)
Q Consensus 4 ~Gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~ 35 (415)
.++.+++.|.++|.++.....+...+..+|..
T Consensus 61 ~~~~~~~~ivv~c~~g~~s~~~~~~l~~~G~~ 92 (106)
T cd01519 61 PKPSKDKELIFYCKAGVRSKAAAELARSLGYE 92 (106)
T ss_pred cCCCCCCeEEEECCCcHHHHHHHHHHHHcCCc
Confidence 46677889999999988777777888888864
No 287
>TIGR01734 D-ala-DACP-lig D-alanine--poly(phosphoribitol) ligase, subunit 1. This model represents the enzyme (also called D-alanine-D-alanyl carrier protein ligase) which activates D-alanine as an adenylate via the reaction D-ala + ATP - D-ala-AMP + PPi, and further catalyzes the condensation of the amino acid adenylate with the D-alanyl carrier protein (D-ala-ACP). The D-alanine is then further transferred to teichoic acid in the biosynthesis of lipoteichoic acid (LTA) and wall teichoic acid (WTA) in gram positive bacteria, both polysacchatides.
Probab=26.54 E-value=3.6e+02 Score=26.04 Aligned_cols=81 Identities=9% Similarity=0.032 Sum_probs=60.1
Q ss_pred EeecHHHHHHhhhhhhhhhhccccCCCCCEEEEeCChhhHHHHHHHHHhhhcCcEEEEeCC--CHHHHHHHHHhhCCeEE
Q 014951 146 VLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTMF 223 (415)
Q Consensus 146 ~~th~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~vv~~~~--~~~~~~~~i~~~~~t~~ 223 (415)
.+|...+...+..+...+.. ..+..++++....+-+... ....++++..|+.++..+. ..+.+...+++.++..+
T Consensus 25 ~~ty~el~~~~~~~a~~L~~--~g~~~~~~V~i~~~~~~~~-~~~~la~~~~G~~~v~~~~~~~~~~~~~~~~~~~~~~i 101 (502)
T TIGR01734 25 ELTYQQLKEQSDRLAAFIQK--RILPKKSPIIVYGHMEPHM-LVAFLGSIKSGHAYIPVDTSIPSERIEMIIEAAGPELV 101 (502)
T ss_pred EEeHHHHHHHHHHHHHHHHH--hCCCCCCeEEEEeCCCHHH-HHHHHHHHHhCCEEeCCCCcChHHHHHHHHHhcCCCEE
Confidence 68999998888877665532 2466788888777765432 3456778889998887765 77888999999999998
Q ss_pred EeCcHH
Q 014951 224 SGVPRV 229 (415)
Q Consensus 224 ~~~P~~ 229 (415)
......
T Consensus 102 i~~~~~ 107 (502)
T TIGR01734 102 IHTAEL 107 (502)
T ss_pred Eecccc
Confidence 876643
No 288
>PF07722 Peptidase_C26: Peptidase C26; InterPro: IPR011697 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Cysteine peptidases have characteristic molecular topologies, which can be seen not only in their three-dimensional structures, but commonly also in the two-dimensional structures. These are peptidases in which the nucleophile is the sulphydryl group of a cysteine residue. Cysteine proteases are divided into clans (proteins which are evolutionary related), and further sub-divided into families, on the basis of the architecture of their catalytic dyad or triad []. These peptidases have gamma-glutamyl hydrolase activity; that is they catalyse the cleavage of the gamma-glutamyl bond in poly-gamma-glutamyl substrates. They are structurally related to IPR000991 from INTERPRO, but contain extensions in four loops and at the C terminus []. They belong to MEROPS peptidase family C26 (gamma-glutamyl hydrolase family), clan PC. The majority of the sequences are classified as unassigned peptidases. ; GO: 0016787 hydrolase activity, 0006541 glutamine metabolic process; PDB: 1L9X_A 3FIJ_D.
Probab=26.41 E-value=77 Score=27.01 Aligned_cols=36 Identities=8% Similarity=0.155 Sum_probs=23.9
Q ss_pred HHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEc
Q 014951 27 EACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQ 63 (415)
Q Consensus 27 lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~ii~~ 63 (415)
=++..+|+.+++|++..+.+.+..+++.++ -++|+.
T Consensus 31 ~~i~~aG~~pv~ip~~~~~~~~~~~l~~id-Glll~G 66 (217)
T PF07722_consen 31 KAIEAAGGRPVPIPYDADDEELDELLDRID-GLLLPG 66 (217)
T ss_dssp HHHHHTT-EEEEE-SS--HHHHHHHHHCSS-EEEE--
T ss_pred HHHHHcCCEEEEEccCCCHHHHHHHHhhcC-EEEEcC
Confidence 357788999999999999999999998665 344443
No 289
>KOG1794 consensus N-Acetylglucosamine kinase [Carbohydrate transport and metabolism]
Probab=26.35 E-value=97 Score=27.63 Aligned_cols=74 Identities=16% Similarity=0.024 Sum_probs=46.6
Q ss_pred ceeEEEEecCCCC--HHHHHHHHHhcCCceEEeeccCCCCceeeeecCCcccccCcccccccCeEEEEeecCCCCCCCC
Q 014951 291 RLQAMLSGAAPLP--IHVEEFLRVTSGAPLTQGYGLTESCSGCFTSLADVFNMIGTVGVPMTTVEARLESVPEMGYDAL 367 (415)
Q Consensus 291 ~lr~v~~~G~~~~--~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~G~~~~g~~~~i~~~~~~~~~~~ 367 (415)
+|-.-++|++.-+ .++.+++++.|+-..-+.|=++|+.+.+....+... .|-+-..--|...+.++ +||....+
T Consensus 70 ~lgL~lSg~d~e~~~~~lv~~~R~~fps~ae~~~v~sDa~~sl~a~t~g~~--~GiVLiaGTgs~crl~~-~DGs~~~~ 145 (336)
T KOG1794|consen 70 SLGLGLSGTDQEDKNRKLVTEFRDKFPSVAENFYVTSDADGSLAAATPGGE--GGIVLIAGTGSNCRLVN-PDGSEKGA 145 (336)
T ss_pred eeeeecccCCchhHHHHHHHHHHHhccchhheeeeehhHHHHHhhcCCCCC--CcEEEEecCCceeEEEC-CCCCccCC
Confidence 4555556666543 468889999888777778999998766554433211 13344444677777777 66654433
No 290
>cd02071 MM_CoA_mut_B12_BD methylmalonyl CoA mutase B12 binding domain. This domain binds to B12 (adenosylcobamide), which initiates the conversion of succinyl CoA and methylmalonyl CoA by forming an adenosyl radical, which then undergoes a rearrangement exchanging a hydrogen atom with a group attached to a neighboring carbon atom. This family is present in both mammals and bacteria. Bacterial members are heterodimers and involved in the fermentation of pyruvate to propionate. Mammalian members are homodimers and responsible for the conversion of odd-chain fatty acids and branched-chain amino acids via propionyl CoA to succinyl CoA for further degradation.
Probab=26.27 E-value=2.9e+02 Score=20.84 Aligned_cols=46 Identities=7% Similarity=-0.055 Sum_probs=33.7
Q ss_pred hhHHHHHH-HHHhhhcCcEEEEeCC--CHHHHHHHHHhhCCeEEEeCcH
Q 014951 183 AHIYDQII-ETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTMFSGVPR 228 (415)
Q Consensus 183 ~~~~~~~~-~~~~l~~G~~vv~~~~--~~~~~~~~i~~~~~t~~~~~P~ 228 (415)
.|..|... ....-..|..++.... .++.+.+.+.+.+++++...-.
T Consensus 11 ~H~lG~~~~~~~l~~~G~~vi~lG~~vp~e~~~~~a~~~~~d~V~iS~~ 59 (122)
T cd02071 11 GHDRGAKVIARALRDAGFEVIYTGLRQTPEEIVEAAIQEDVDVIGLSSL 59 (122)
T ss_pred hhHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEccc
Confidence 36666654 3444566888887765 7899999999999999776543
No 291
>TIGR02539 SepCysS Sep-tRNA:Cys-tRNA synthase. Aminoacylation of tRNA(Cys) with Cys, and cysteine biosynthesis in the process, happens in Methanocaldococcus jannaschii and several other archaea by misacylation of tRNA(Cys) with O-phosphoserine (Sep), followed by modification of the phosphoserine to cysteine. In some species, direct tRNA-cys aminoacylation also occurs but this pathway is required for Cys biosynthesis. Members of this protein catalyze the second step in this two step pathway, using pyridoxal phosphate and a sulfur donor to synthesize Cys from Sep while attached to the tRNA.
Probab=26.05 E-value=2.4e+02 Score=26.19 Aligned_cols=55 Identities=13% Similarity=0.111 Sum_probs=35.2
Q ss_pred CCCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCCC------CCHHHHHHHHHh------cCceEEEEc
Q 014951 6 VNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDT------LGANAVEFIINH------AEVSIAFVQ 63 (415)
Q Consensus 6 v~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~~------~~~~~l~~~l~~------~~~~~ii~~ 63 (415)
+++||.|.+..+++... +.++...|+.+..++.. .+.+.+...++. .++++|+.+
T Consensus 87 ~~~gd~Vl~~~~~h~s~---~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lv~~~ 153 (370)
T TIGR02539 87 CKEGDWVVLDGLAHYTS---YVAAERAGLNVKEVPHTGHPEYKVDPEGYGEVIEEVEDESGKPPVLALLT 153 (370)
T ss_pred hCCCCEEEECCcccHHH---HHHHHHcCCEEEEEecCCcccCCcCHHHHHHHHHHhhhccCCCcEEEEEE
Confidence 36889887754444332 24677788887776653 467888887764 256666654
No 292
>PRK06060 acyl-CoA synthetase; Validated
Probab=26.00 E-value=4.3e+02 Score=27.17 Aligned_cols=83 Identities=13% Similarity=0.089 Sum_probs=61.0
Q ss_pred EeecHHHHHHhhhhhhhhhhccccCCCCCEEEEeCChhhHHHHHHHHHhhhcCcEEEEeCC--CHHHHHHHHHhhCCeEE
Q 014951 146 VLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTMF 223 (415)
Q Consensus 146 ~~th~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~vv~~~~--~~~~~~~~i~~~~~t~~ 223 (415)
.+|...+...+..+...+.. .++.+++++..+++-+.. .+..+++++..|+..+.... ...++...++..++..+
T Consensus 30 ~~Ty~eL~~~~~~lA~~L~~--~g~~~g~~V~i~~~~~~~-~~~~~la~~~aG~~~vpi~p~~~~~~l~~~l~~~~~~~v 106 (705)
T PRK06060 30 VVTHGQIHDGAARLGEVLRN--RGLSSGDRVLLCLPDSPD-LVQLLLACLARGVMAFLANPELHRDDHALAARNTEPALV 106 (705)
T ss_pred ceeHHHHHHHHHHHHHHHHH--cCCCCCCEEEEECCCCHH-HHHHHHHHHHhCcEEEecCCCCCHHHHHHHHhcCCCcEE
Confidence 48999998888777665532 367889999888776642 23346778888998887765 67888888899999888
Q ss_pred EeCcHHHH
Q 014951 224 SGVPRVYD 231 (415)
Q Consensus 224 ~~~P~~~~ 231 (415)
+.......
T Consensus 107 i~~~~~~~ 114 (705)
T PRK06060 107 VTSDALRD 114 (705)
T ss_pred EEchHHhh
Confidence 87654433
No 293
>PLN03026 histidinol-phosphate aminotransferase; Provisional
Probab=25.98 E-value=3e+02 Score=25.68 Aligned_cols=11 Identities=27% Similarity=0.386 Sum_probs=5.7
Q ss_pred CCCCeEEEEcC
Q 014951 7 NPGDRCGIYGS 17 (415)
Q Consensus 7 ~~gd~V~l~~~ 17 (415)
++||.|++..|
T Consensus 125 ~~gd~Vlv~~P 135 (380)
T PLN03026 125 DPGDKIIDCPP 135 (380)
T ss_pred CCCCEEEEcCC
Confidence 45555555544
No 294
>PRK08974 long-chain-fatty-acid--CoA ligase; Validated
Probab=25.75 E-value=3.9e+02 Score=26.35 Aligned_cols=86 Identities=12% Similarity=0.026 Sum_probs=62.9
Q ss_pred EeecHHHHHHhhhhhhhhhhccccCCCCCEEEEeCChhhHHHHHHHHHhhhcCcEEEEeCC--CHHHHHHHHHhhCCeEE
Q 014951 146 VLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTMF 223 (415)
Q Consensus 146 ~~th~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~vv~~~~--~~~~~~~~i~~~~~t~~ 223 (415)
.+|...+......+...+.. ..+...++++..+.+-.. -....+++++..|+..+..+. .+.++.+.+++.+++.+
T Consensus 48 ~lTy~~l~~~~~~la~~L~~-~~g~~~g~~V~i~~~~~~-~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~i 125 (560)
T PRK08974 48 VMTFRKLEERSRAFAAYLQN-GLGLKKGDRVALMMPNLL-QYPIALFGILRAGMIVVNVNPLYTPRELEHQLNDSGAKAI 125 (560)
T ss_pred cccHHHHHHHHHHHHHHHHH-hcCCCCCCEEEEECCCCH-HHHHHHHHHHHcCcEEeccCccCCHHHHHHHHHhcCceEE
Confidence 57888888887777665421 136678899988876542 333456788899999988765 78899999999999999
Q ss_pred EeCcHHHHHH
Q 014951 224 SGVPRVYDRI 233 (415)
Q Consensus 224 ~~~P~~~~~l 233 (415)
...+...+.+
T Consensus 126 i~~~~~~~~~ 135 (560)
T PRK08974 126 VIVSNFAHTL 135 (560)
T ss_pred EEeccccHHH
Confidence 8876554433
No 295
>PRK06382 threonine dehydratase; Provisional
Probab=25.63 E-value=3e+02 Score=26.11 Aligned_cols=53 Identities=6% Similarity=-0.149 Sum_probs=40.5
Q ss_pred EcCCcHhHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEcCCCh
Q 014951 15 YGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKI 67 (415)
Q Consensus 15 ~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~ 67 (415)
....+-.-..+.++|...|..+..+-|...+......++..+++++++.....
T Consensus 78 ~aSsGN~g~a~A~aa~~~G~~~~ivmp~~~~~~k~~~~~~~GA~Vv~~~~~~~ 130 (406)
T PRK06382 78 TASAGNHAQGVAYAASINGIDAKIVMPEYTIPQKVNAVEAYGAHVILTGRDYD 130 (406)
T ss_pred EECCCHHHHHHHHHHHHcCCCEEEEEcCCCHHHHHHHHHHcCCEEEEECCCHH
Confidence 33445555556788999999888887777777777889999999999887543
No 296
>TIGR03205 pimA dicarboxylate--CoA ligase PimA. PimA, a member of a large family of acyl-CoA ligases, is found in a characteristic operon pimFABCDE for the metabolism of pimelate and related compounds. It is found, so far, in Bradyrhizobium japonicum and several strains of Rhodopseudomonas palustris. PimA from R. palustris was shown to be active as a CoA ligase for C(7) to C(14) dicarboxylates and fatty acids.
Probab=25.60 E-value=3.9e+02 Score=26.23 Aligned_cols=79 Identities=9% Similarity=0.029 Sum_probs=59.6
Q ss_pred EeecHHHHHHhhhhhhhhhhccccCCCCCEEEEeCChhhHHHHHHHHHhhhcCcEEEEeCC--CHHHHHHHHHhhCCeEE
Q 014951 146 VLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTMF 223 (415)
Q Consensus 146 ~~th~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~vv~~~~--~~~~~~~~i~~~~~t~~ 223 (415)
.+|...+......+...+ ...++.+++++...++-.. -.....++++..|+.++.... ...++...++..++..+
T Consensus 46 ~~ty~el~~~~~~~a~~L--~~~gi~~g~~V~i~~~~~~-~~~~~~la~~~~G~~~v~l~~~~~~~~l~~~i~~~~~~~v 122 (541)
T TIGR03205 46 PITYTELEAMAETAAAAL--LRAGYGKDASVALYLGNTP-DHPINFFGALKAGARVVHLSPLDGERALSHKLSDSGARLL 122 (541)
T ss_pred EeeHHHHHHHHHHHHHHH--HHcCCCCCCEEEEECCCCh-HHHHHHHHHHhcCeEEEecCCCCCHHHHHHHHhhcCceEE
Confidence 588888888777766644 2236788999998888543 233346677888999887765 88899999999999998
Q ss_pred EeCc
Q 014951 224 SGVP 227 (415)
Q Consensus 224 ~~~P 227 (415)
+...
T Consensus 123 i~~~ 126 (541)
T TIGR03205 123 ITSD 126 (541)
T ss_pred EEeC
Confidence 8754
No 297
>PRK06381 threonine synthase; Validated
Probab=25.56 E-value=2.7e+02 Score=25.33 Aligned_cols=55 Identities=9% Similarity=-0.115 Sum_probs=42.1
Q ss_pred EEEEcCCcHhHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEcCCC
Q 014951 12 CGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENK 66 (415)
Q Consensus 12 V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~ii~~~~~ 66 (415)
..+....+-.-..+.++|...|..+..+-|...+......++..++++++++...
T Consensus 65 ~lv~aSsGN~g~alA~~aa~~G~~~~ivvp~~~~~~~~~~l~~~GA~V~~~~~~~ 119 (319)
T PRK06381 65 GITVGTCGNYGASIAYFARLYGLKAVIFIPRSYSNSRVKEMEKYGAEIIYVDGKY 119 (319)
T ss_pred EEEEeCCcHHHHHHHHHHHHcCCcEEEEECCCCCHHHHHHHHHcCCEEEEcCCCH
Confidence 3344556667777788899999988877666666666678999999999998754
No 298
>PF05221 AdoHcyase: S-adenosyl-L-homocysteine hydrolase; InterPro: IPR000043 Adenosylhomocysteinase (S-adenosyl-L-homocysteine hydrolase, 3.3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. This enzyme is ubiquitous, highly conserved, and may play a key role in the regulation of the intracellular concentration of adenosylhomocysteine. AdoHcyase requires NAD+ as a cofactor and contains a central glycine-rich region which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity, 0006730 one-carbon metabolic process; PDB: 3N58_B 3H9U_C 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 1K0U_F 1B3R_A 1XWF_D ....
Probab=25.41 E-value=3.2e+02 Score=24.12 Aligned_cols=59 Identities=7% Similarity=-0.088 Sum_probs=43.4
Q ss_pred CCCCeEEEEcCCcHhHHHHHHHHHHcCCEEE--ecCCCCCHHHHHHHHHhcCceEEEEcCC
Q 014951 7 NPGDRCGIYGSNCPEWIIAMEACNSQAITYV--PLYDTLGANAVEFIINHAEVSIAFVQEN 65 (415)
Q Consensus 7 ~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~--~l~~~~~~~~l~~~l~~~~~~~ii~~~~ 65 (415)
-+|-+|+.+++=.++..+....+..+|+-+. .-||..+.+.....|...++.+.---.+
T Consensus 41 l~G~rIa~cLHle~kTA~L~~tL~a~GAeV~~~~sNplSTQDdvaAAL~~~Gi~V~A~~ge 101 (268)
T PF05221_consen 41 LKGARIAGCLHLEAKTAVLAETLKALGAEVRWTGSNPLSTQDDVAAALAEEGIPVFAWKGE 101 (268)
T ss_dssp TTTEEEEEES--SHHHHHHHHHHHHTTEEEEEEESSTTT--HHHHHHHHHTTEEEEE-TT-
T ss_pred CCCCEEEEEEechHHHHHHHHHHHHcCCeEEEecCCCcccchHHHHHhccCCceEEEeCCC
Confidence 3688999999999999999999999999776 4577778888888888887766543333
No 299
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=25.33 E-value=3.8e+02 Score=29.99 Aligned_cols=87 Identities=8% Similarity=0.008 Sum_probs=60.3
Q ss_pred CCCCCCCeEEEEcCCcHhHHH-HHHHHHHcCCEEEecCC--CCCHHHHHHHHHhcCceEEEEcCCChhhhhhcCc-----
Q 014951 4 RGVNPGDRCGIYGSNCPEWII-AMEACNSQAITYVPLYD--TLGANAVEFIINHAEVSIAFVQENKIPSILSCLP----- 75 (415)
Q Consensus 4 ~Gv~~gd~V~l~~~n~~~~~~-~~lA~~~~G~~~~~l~~--~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~----- 75 (415)
.+++++|++...++-+.+.-+ -+++.+..|+..+..++ ...++.+..++++.++.++.........+.....
T Consensus 634 ~~~~~~d~~l~~~~~~fd~~~~~~~~~l~~G~~l~~~~~~~~~~~~~~~~~i~~~~vt~~~~~Ps~l~~l~~~~~~~~~~ 713 (1296)
T PRK10252 634 YPLTADDVVLQKTPCSFDVSVWEFFWPFIAGAKLVMAEPEAHRDPLAMQQFFAEYGVTTTHFVPSMLAAFVASLTPEGAR 713 (1296)
T ss_pred cCCCCCCEEEEeCCcchhhhHHHHHHHHhCCCEEEECChhccCCHHHHHHHHHHcCCeEEEeCHHHHHHHHhhhcccccc
Confidence 478899999988887655433 35677889999887664 4578889999999999999887766554443211
Q ss_pred cCCCCccEEEEecCC
Q 014951 76 RCCLYLKTIVSFANV 90 (415)
Q Consensus 76 ~~~~~~~~v~~~~~~ 90 (415)
..+..++.++.-++.
T Consensus 714 ~~~~~lr~i~~gGe~ 728 (1296)
T PRK10252 714 QSCASLRQVFCSGEA 728 (1296)
T ss_pred ccCCCccEEEEecCC
Confidence 112456666655544
No 300
>PRK15481 transcriptional regulatory protein PtsJ; Provisional
Probab=25.28 E-value=2.8e+02 Score=26.42 Aligned_cols=54 Identities=9% Similarity=0.141 Sum_probs=32.0
Q ss_pred CCCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCC---CCCHHHHHHHHHhcCceEEEEc
Q 014951 6 VNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYD---TLGANAVEFIINHAEVSIAFVQ 63 (415)
Q Consensus 6 v~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~---~~~~~~l~~~l~~~~~~~ii~~ 63 (415)
+++||.|++..|.-..+ .-++...|+.+++++. .+..+++...++. ++++++..
T Consensus 162 ~~pgd~Vlv~~P~y~~~---~~~~~~~g~~~~~v~~~~~g~~~~~l~~~~~~-~~k~i~~~ 218 (431)
T PRK15481 162 LLPGDSVAVEDPCFLSS---INMLRYAGFSASPVSVDAEGMQPEKLERALAQ-GARAVILT 218 (431)
T ss_pred CCCCCEEEEeCCCcHHH---HHHHHHcCCeEEeeccCCCCCCHHHHHHHHhc-CCCEEEEC
Confidence 36788888777754433 3345556776666532 3556667666644 56665554
No 301
>TIGR01137 cysta_beta cystathionine beta-synthase. Members of this family closely resemble cysteine synthase but contain an additional C-terminal CBS domain. The function of any bacterial member included in this family is proposed but not proven.
Probab=25.25 E-value=2.9e+02 Score=26.57 Aligned_cols=60 Identities=12% Similarity=0.000 Sum_probs=45.2
Q ss_pred CCC-CCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEcC
Q 014951 4 RGV-NPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQE 64 (415)
Q Consensus 4 ~Gv-~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~ii~~~ 64 (415)
.|. ++|++|.-. ..+-.-....++|.+.|..+..+-|...+.+....++..++++++++.
T Consensus 56 ~g~~~~g~~vv~~-ssGN~g~alA~~a~~~G~~~~iv~p~~~~~~k~~~~~~~GA~v~~~~~ 116 (454)
T TIGR01137 56 SGRLKPGDTIIEP-TSGNTGIGLALVAAIKGYKCIIVLPEKMSNEKVDVLKALGAEIVRTPT 116 (454)
T ss_pred cCCCCCCCEEEEe-CCcHHHHHHHHHHHHcCCeEEEEeCCCcCHHHHHHHHHCCCEEEEcCC
Confidence 343 677776554 556666667788999999888877766666677888999999999875
No 302
>PRK07787 acyl-CoA synthetase; Validated
Probab=25.19 E-value=4e+02 Score=25.55 Aligned_cols=74 Identities=8% Similarity=0.016 Sum_probs=55.7
Q ss_pred EeecHHHHHHhhhhhhhhhhccccCCCCCEEEEeCChhhHHHHHHHHHhhhcCcEEEEeCC--CHHHHHHHHHhhCCeEE
Q 014951 146 VLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTMF 223 (415)
Q Consensus 146 ~~th~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~vv~~~~--~~~~~~~~i~~~~~t~~ 223 (415)
.+|...+...+..+...+ .+.|++..+.+-.- .....+++++..|+..+..+. .+.++...+++.+++.+
T Consensus 25 ~~Ty~el~~~~~~~a~~L-------~~~~~V~l~~~~~~-~~~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i 96 (471)
T PRK07787 25 VLSRSDLAGAATAVAERV-------AGARRVAVLATPTL-ATVLAVVGALIAGVPVVPVPPDSGVAERRHILADSGAQAW 96 (471)
T ss_pred EEEHHHHHHHHHHHHHHh-------ccCCEEEEECCCCH-HHHHHHHHHHhcCcEEeecCCCCChHHHHHHHHhcCCCEE
Confidence 578888888887776654 35677777766542 223346788999999888766 78899999999999998
Q ss_pred EeCc
Q 014951 224 SGVP 227 (415)
Q Consensus 224 ~~~P 227 (415)
...+
T Consensus 97 l~~~ 100 (471)
T PRK07787 97 LGPA 100 (471)
T ss_pred EecC
Confidence 8765
No 303
>PRK08045 cystathionine gamma-synthase; Provisional
Probab=25.18 E-value=2.6e+02 Score=26.26 Aligned_cols=25 Identities=16% Similarity=-0.003 Sum_probs=12.7
Q ss_pred HHHHHHHHhcCC-ceEEeeccCCCCc
Q 014951 305 HVEEFLRVTSGA-PLTQGYGLTESCS 329 (415)
Q Consensus 305 ~~~~~~~~~~~~-~~~~~yG~tE~~~ 329 (415)
+....|.+.+.. .+-..+|..|+..
T Consensus 309 ~~~~~f~~~l~~~~~~~s~G~~~sl~ 334 (386)
T PRK08045 309 QTLRRFLGGLSLFTLAESLGGVESLI 334 (386)
T ss_pred HHHHHHHHhccceeEeccCCCCceeE
Confidence 333344444443 3455677777654
No 304
>PRK14057 epimerase; Provisional
Probab=25.06 E-value=3.8e+02 Score=23.54 Aligned_cols=54 Identities=9% Similarity=0.012 Sum_probs=33.1
Q ss_pred CeEEEEcCCcHhHHHHHHHHHHcCC----------EEEecCCCCCHHHHHHHHHhcCceEEEEc
Q 014951 10 DRCGIYGSNCPEWIIAMEACNSQAI----------TYVPLYDTLGANAVEFIINHAEVSIAFVQ 63 (415)
Q Consensus 10 d~V~l~~~n~~~~~~~~lA~~~~G~----------~~~~l~~~~~~~~l~~~l~~~~~~~ii~~ 63 (415)
|.|.+....+.+..-+.-.+-..|+ .-+.|+|..+.+.+..+|...+.-++.+-
T Consensus 100 d~It~H~Ea~~~~~~~l~~Ir~~G~k~~~~~~~~kaGlAlnP~Tp~e~i~~~l~~vD~VLvMtV 163 (254)
T PRK14057 100 HCITLQAEGDIHLHHTLSWLGQQTVPVIGGEMPVIRGISLCPATPLDVIIPILSDVEVIQLLAV 163 (254)
T ss_pred CEEEEeeccccCHHHHHHHHHHcCCCcccccccceeEEEECCCCCHHHHHHHHHhCCEEEEEEE
Confidence 5666666655443333334455554 55667777777777777777666666554
No 305
>cd06454 KBL_like KBL_like; this family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to serine palmitoyltransferase (SPT), 5-aminolevulinate synthase (ALAS), 8-amino-7-oxononanoate synthase (AONS), and 2-amino-3-ketobutyrate CoA ligase (KBL). SPT is responsible for the condensation of L-serine with palmitoyl-CoA to produce 3-ketodihydrospingosine, the reaction of the first step in sphingolipid biosynthesis. ALAS is involved in heme biosynthesis; it catalyzes the synthesis of 5-aminolevulinic acid from glycine and succinyl-coenzyme A. AONS catalyses the decarboxylative condensation of l-alanine and pimeloyl-CoA in the first committed step of biotin biosynthesis. KBL catalyzes the second reaction step of the metabolic degradation pathway for threonine converting 2-amino-3-ketobutyrate, to glycine and acetyl-CoA. The members of this CD are widely found in all three forms of life.
Probab=24.87 E-value=2.7e+02 Score=25.33 Aligned_cols=53 Identities=8% Similarity=-0.007 Sum_probs=32.0
Q ss_pred CCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhc----CceEEEEc
Q 014951 7 NPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHA----EVSIAFVQ 63 (415)
Q Consensus 7 ~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~----~~~~ii~~ 63 (415)
++||.|.+.. +++.....++...|+.+..+. ....+.+..+++.. +++++++.
T Consensus 83 ~~gd~Vl~~~---~~~~~~~~~~~~~g~~~~~~~-~~~~~~le~~i~~~~~~~~~~~v~~~ 139 (349)
T cd06454 83 GKGDLIISDS---LNHASIIDGIRLSGAKKRIFK-HNDMEDLEKLLREARRPYGKKLIVTE 139 (349)
T ss_pred CCCCEEEEeh---hhhHHHHHHHHHcCCceEEec-CCCHHHHHHHHHHhhccCCCeEEEEe
Confidence 6788777643 334444455667787777663 34667777777653 35555543
No 306
>PLN03154 putative allyl alcohol dehydrogenase; Provisional
Probab=24.83 E-value=3.6e+02 Score=24.77 Aligned_cols=57 Identities=14% Similarity=0.071 Sum_probs=38.7
Q ss_pred CCCCCCCeEEEEcC-CcHhHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEc
Q 014951 4 RGVNPGDRCGIYGS-NCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQ 63 (415)
Q Consensus 4 ~Gv~~gd~V~l~~~-n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~ii~~ 63 (415)
.++++|++|+|... .++-.+++++|-. .|+.++.+.. +.+....+.+..+++.+|..
T Consensus 154 ~~~~~g~~VlV~GaaG~vG~~aiqlAk~-~G~~Vi~~~~--~~~k~~~~~~~lGa~~vi~~ 211 (348)
T PLN03154 154 CSPKKGDSVFVSAASGAVGQLVGQLAKL-HGCYVVGSAG--SSQKVDLLKNKLGFDEAFNY 211 (348)
T ss_pred cCCCCCCEEEEecCccHHHHHHHHHHHH-cCCEEEEEcC--CHHHHHHHHHhcCCCEEEEC
Confidence 46899999999988 5688888888765 5876554432 34444443346777777754
No 307
>PRK07503 methionine gamma-lyase; Provisional
Probab=24.66 E-value=2.2e+02 Score=26.97 Aligned_cols=22 Identities=14% Similarity=-0.031 Sum_probs=11.3
Q ss_pred HHHHHhcCC-ceEEeeccCCCCc
Q 014951 308 EFLRVTSGA-PLTQGYGLTESCS 329 (415)
Q Consensus 308 ~~~~~~~~~-~~~~~yG~tE~~~ 329 (415)
..|.+.+.. ..-..+|.+|+..
T Consensus 326 ~~~~~~l~l~~~~~slG~~~sl~ 348 (403)
T PRK07503 326 RRFMNALQLFARAVSLGDAESLA 348 (403)
T ss_pred HHHHHhCCcceeecccCCCCccC
Confidence 334343443 3334578788654
No 308
>PRK09029 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=24.52 E-value=4.7e+02 Score=24.94 Aligned_cols=80 Identities=14% Similarity=-0.041 Sum_probs=59.6
Q ss_pred EeecHHHHHHhhhhhhhhhhccccCCCCCEEEEeCChhhHHHHHHHHHhhhcCcEEEEeCC--CHHHHHHHHHhhCCeEE
Q 014951 146 VLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTMF 223 (415)
Q Consensus 146 ~~th~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~vv~~~~--~~~~~~~~i~~~~~t~~ 223 (415)
.+|+..+......+...+.. ....+++++....+-.. .....+++++..|+..+.... .++++...+++.++..+
T Consensus 28 ~~ty~el~~~~~~~a~~L~~--~g~~~~~~v~l~~~~~~-~~~~~~la~~~~G~~~v~~~~~~~~~~~~~~~~~~~~~~~ 104 (458)
T PRK09029 28 VLTWQQLCARIDQLAAGFAQ--QGVVEGSGVALRGKNSP-ETLLAYLALLQCGARVLPLNPQLPQPLLEELLPSLTLDFA 104 (458)
T ss_pred ceeHHHHHHHHHHHHHHHHH--cCCCCCCEEEEecCCCH-HHHHHHHHHHHcCCEEeecCCCCCHHHHHHHHHhcCCCEE
Confidence 58999998888877665422 25778899888876654 333346778889999988866 77888888999999888
Q ss_pred EeCcH
Q 014951 224 SGVPR 228 (415)
Q Consensus 224 ~~~P~ 228 (415)
.....
T Consensus 105 i~~~~ 109 (458)
T PRK09029 105 LVLEG 109 (458)
T ss_pred EEcCc
Confidence 76543
No 309
>cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase). NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd
Probab=24.46 E-value=2.3e+02 Score=26.28 Aligned_cols=57 Identities=12% Similarity=0.161 Sum_probs=36.3
Q ss_pred cCCCCCCCeEEEEcCCcHhHHHHHHHHHHcCC-EEEecCCCCCHHHHHHHHHhcCceEEEEc
Q 014951 3 SRGVNPGDRCGIYGSNCPEWIIAMEACNSQAI-TYVPLYDTLGANAVEFIINHAEVSIAFVQ 63 (415)
Q Consensus 3 ~~Gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~-~~~~l~~~~~~~~l~~~l~~~~~~~ii~~ 63 (415)
..++++|++|+|.....+-.+++++|-. .|+ .++.++. +++.+ .+++...++.++..
T Consensus 186 ~~~i~~g~~VlV~G~G~vG~~a~~lak~-~G~~~Vi~~~~--~~~r~-~~a~~~Ga~~~i~~ 243 (371)
T cd08281 186 TAGVRPGQSVAVVGLGGVGLSALLGAVA-AGASQVVAVDL--NEDKL-ALARELGATATVNA 243 (371)
T ss_pred ccCCCCCCEEEEECCCHHHHHHHHHHHH-cCCCcEEEEcC--CHHHH-HHHHHcCCceEeCC
Confidence 3578999999998876677776666654 476 4555543 34443 34466777666543
No 310
>TIGR02822 adh_fam_2 zinc-binding alcohol dehydrogenase family protein. Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). The gene neighborhood of members of this family is not conserved and it appears that no members are characterized. The sequence of the family includes 6 invariant cysteine residues and one invariant histidine. It appears that no member is characterized.
Probab=24.43 E-value=1.8e+02 Score=26.52 Aligned_cols=56 Identities=25% Similarity=0.226 Sum_probs=36.7
Q ss_pred cCCCCCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEE
Q 014951 3 SRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFV 62 (415)
Q Consensus 3 ~~Gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~ii~ 62 (415)
..++++|++|+|...-+.-.+++.+|-. .|+.++.+.. +.+. ..++++.+++.++.
T Consensus 160 ~~~~~~g~~VlV~G~g~iG~~a~~~a~~-~G~~vi~~~~--~~~~-~~~a~~~Ga~~vi~ 215 (329)
T TIGR02822 160 RASLPPGGRLGLYGFGGSAHLTAQVALA-QGATVHVMTR--GAAA-RRLALALGAASAGG 215 (329)
T ss_pred hcCCCCCCEEEEEcCCHHHHHHHHHHHH-CCCeEEEEeC--ChHH-HHHHHHhCCceecc
Confidence 3578899999999876666666665544 6876555543 2333 45667788776653
No 311
>PRK10083 putative oxidoreductase; Provisional
Probab=24.37 E-value=2.8e+02 Score=25.13 Aligned_cols=57 Identities=11% Similarity=0.010 Sum_probs=36.1
Q ss_pred CCCCCCCeEEEEcCCcHhHHHHHHHHHHcCCE-EEecCCCCCHHHHHHHHHhcCceEEEEc
Q 014951 4 RGVNPGDRCGIYGSNCPEWIIAMEACNSQAIT-YVPLYDTLGANAVEFIINHAEVSIAFVQ 63 (415)
Q Consensus 4 ~Gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~-~~~l~~~~~~~~l~~~l~~~~~~~ii~~ 63 (415)
.++++|++|+|+.....-..++.+|-...|+. ++.++. +.+. ..++...+++.++..
T Consensus 156 ~~~~~g~~vlI~g~g~vG~~~~~~a~~~~G~~~v~~~~~--~~~~-~~~~~~~Ga~~~i~~ 213 (339)
T PRK10083 156 TGPTEQDVALIYGAGPVGLTIVQVLKGVYNVKAVIVADR--IDER-LALAKESGADWVINN 213 (339)
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHhCCCCEEEEEcC--CHHH-HHHHHHhCCcEEecC
Confidence 46889999999987667776666666556874 444443 2333 344556677666643
No 312
>PRK08308 acyl-CoA synthetase; Validated
Probab=23.63 E-value=5.3e+02 Score=24.16 Aligned_cols=82 Identities=9% Similarity=0.022 Sum_probs=56.3
Q ss_pred CCCCCCeEEEEcCCc--HhHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEcCCChhhhhhcCccCCCCcc
Q 014951 5 GVNPGDRCGIYGSNC--PEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLK 82 (415)
Q Consensus 5 Gv~~gd~V~l~~~n~--~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~ 82 (415)
+++++|++...+|-. ..++..+++.+..|+.++... ..+++.+...++..++.+++..+.....+.+..... ..++
T Consensus 138 ~~~~~~~~~~~~p~~h~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~-~~l~ 215 (414)
T PRK08308 138 NCEQDETPIVACPVTHSYGLICGVLAALTRGSKPVIIT-NKNPKFALNILRNTPQHILYAVPLMLHILGRLLPGT-FQFH 215 (414)
T ss_pred CCCcccEEEEecCcHHHHHHHHHHHHHHHcCCEEEecC-CCCHHHHHHHHHHhCCeEEEcCHHHHHHHHhcCCcc-cccc
Confidence 567888887777654 344566788899999888665 456788888899999999888877666555433221 2445
Q ss_pred EEEEec
Q 014951 83 TIVSFA 88 (415)
Q Consensus 83 ~v~~~~ 88 (415)
.++.-+
T Consensus 216 ~~~~~G 221 (414)
T PRK08308 216 AVMTSG 221 (414)
T ss_pred EEEEcc
Confidence 554433
No 313
>PRK09192 acyl-CoA synthetase; Validated
Probab=23.49 E-value=6.5e+02 Score=24.98 Aligned_cols=88 Identities=9% Similarity=-0.097 Sum_probs=63.9
Q ss_pred eEEeecHHHHHHhhhhhhhhhhccccCCCCCEEEEeCChhhHHHHHHHHHhhhcCcEEEEeCC---------CHHHHHHH
Q 014951 144 GVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG---------DVRYLMED 214 (415)
Q Consensus 144 ~v~~th~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~vv~~~~---------~~~~~~~~ 214 (415)
.-.+|...+...+..+...+. ...+.++|++..+++-+- ......++++..|+..+.... ..+++...
T Consensus 47 ~~~~Ty~eL~~~~~~~a~~L~--~~gi~~gd~V~l~~~n~~-~~~~~~lA~~~~G~~~v~i~~~~~~~~~~~~~~~l~~~ 123 (579)
T PRK09192 47 EEALPYQTLRARAEAGARRLL--ALGLKPGDRVALIAETDG-DFVEAFFACQYAGLVPVPLPLPMGFGGRESYIAQLRGM 123 (579)
T ss_pred EEEecHHHHHHHHHHHHHHHH--HhCCCCCCEEEEEcCCch-hHHHHHHHHHHcCCeeEeccCCcccccchHHHHHHHHH
Confidence 356899988888777766543 236789999998888743 333446678888998887742 15789999
Q ss_pred HHhhCCeEEEeCcHHHHHHH
Q 014951 215 IQELKPTMFSGVPRVYDRIY 234 (415)
Q Consensus 215 i~~~~~t~~~~~P~~~~~l~ 234 (415)
++..++..+.........+.
T Consensus 124 i~~~~~~~il~~~~~~~~~~ 143 (579)
T PRK09192 124 LASAQPAAIITPDELLPWVN 143 (579)
T ss_pred HHhcCCCEEEeChHHHHHHH
Confidence 99999999988776554443
No 314
>cd06451 AGAT_like Alanine-glyoxylate aminotransferase (AGAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to alanine-glyoxylate aminotransferase (AGAT), serine-glyoxylate aminotransferase (SGAT), and 3-hydroxykynurenine transaminase (HKT). AGAT is a homodimeric protein, which catalyses the transamination of glyoxylate to glycine, and SGAT converts serine and glyoxylate to hydroxypyruvate and glycine. HKT catalyzes the PLP-dependent transamination of 3-hydroxykynurenine, a potentially toxic metabolite of the kynurenine pathway.
Probab=23.42 E-value=3.5e+02 Score=24.79 Aligned_cols=56 Identities=5% Similarity=0.002 Sum_probs=25.3
Q ss_pred CCCCCeEEEEcCCcHhHHHHHHHHHHcCCEEE--ecCC--CCCHHHHHHHHHhcCceEEEE
Q 014951 6 VNPGDRCGIYGSNCPEWIIAMEACNSQAITYV--PLYD--TLGANAVEFIINHAEVSIAFV 62 (415)
Q Consensus 6 v~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~--~l~~--~~~~~~l~~~l~~~~~~~ii~ 62 (415)
+++||.|.+..+....... .-++...|+.+. ++++ ..+.+.+...++..++++++.
T Consensus 71 ~~~g~~vl~~~~~~~~~~~-~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~i~~~~~~~v~i 130 (356)
T cd06451 71 LEPGDKVLVGVNGVFGDRW-ADMAERYGADVDVVEKPWGEAVSPEEIAEALEQHDIKAVTL 130 (356)
T ss_pred CCCCCEEEEecCCchhHHH-HHHHHHhCCCeEEeecCCCCCCCHHHHHHHHhccCCCEEEE
Confidence 3566666665443332111 122334454333 3332 244566666655445555544
No 315
>PRK05620 long-chain-fatty-acid--CoA ligase; Validated
Probab=23.11 E-value=7.5e+02 Score=24.53 Aligned_cols=90 Identities=10% Similarity=-0.041 Sum_probs=66.3
Q ss_pred eEEeecHHHHHHhhhhhhhhhhccccCCCCCEEEEeCChhhHHHHHHHHHhhhcCcEEEEeCC--CHHHHHHHHHhhCCe
Q 014951 144 GVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG--DVRYLMEDIQELKPT 221 (415)
Q Consensus 144 ~v~~th~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~vv~~~~--~~~~~~~~i~~~~~t 221 (415)
.-.+|...+...+..+...+.. .....++|++...++-.... +...++++..|+..+.... .+.++...++..++.
T Consensus 36 ~~~~Ty~el~~~~~~la~~L~~-~~g~~~gd~V~~~~~n~~e~-~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~ 113 (576)
T PRK05620 36 QEQTTFAAIGARAAALAHALHD-ELGITGDQRVGSMMYNCAEH-LEVLFAVACMGAVFNPLNKQLMNDQIVHIINHAEDE 113 (576)
T ss_pred eEEEeHHHHHHHHHHHHHHHHH-hcCCCCCCEEEEEeCCCHHH-HHHHHHHHhcCCEEeecccccCHHHHHHHHhccCCc
Confidence 3467888888888777665421 12567889988887765432 3446777888998887765 789999999999999
Q ss_pred EEEeCcHHHHHHHH
Q 014951 222 MFSGVPRVYDRIYT 235 (415)
Q Consensus 222 ~~~~~P~~~~~l~~ 235 (415)
.++..+...+.+.+
T Consensus 114 ~~i~~~~~~~~~~~ 127 (576)
T PRK05620 114 VIVADPRLAEQLGE 127 (576)
T ss_pred EEEEChhhHHHHHH
Confidence 99988877665543
No 316
>PRK08180 feruloyl-CoA synthase; Reviewed
Probab=22.75 E-value=4.8e+02 Score=26.21 Aligned_cols=80 Identities=13% Similarity=0.075 Sum_probs=60.7
Q ss_pred EEeecHHHHHHhhhhhhhhhhccccCCCCCEEEEeCChhhHHHHHHHHHhhhcCcEEEEeCC--C-----HHHHHHHHHh
Q 014951 145 VVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG--D-----VRYLMEDIQE 217 (415)
Q Consensus 145 v~~th~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~vv~~~~--~-----~~~~~~~i~~ 217 (415)
..+|...+...+..+...+. ..+..++|++..+++-.. -.....++++..|+.++.... . +.++...++.
T Consensus 68 ~~~Ty~el~~~v~~~A~~L~--~~Gv~~gd~Vai~~~n~~-e~~~~~lA~~~~Gav~vpl~~~~~~~~~~~~~l~~~l~~ 144 (614)
T PRK08180 68 RRLTYAEALERVRAIAQALL--DRGLSAERPLMILSGNSI-EHALLALAAMYAGVPYAPVSPAYSLVSQDFGKLRHVLEL 144 (614)
T ss_pred eEeeHHHHHHHHHHHHHHHH--HcCCCCCCEEEEecCCCH-HHHHHHHHHHHcCCeEeeeccccccccCCHHHHHHHHhc
Confidence 46899999888887776543 236788999988877654 223356778899999988765 3 6888999999
Q ss_pred hCCeEEEeCc
Q 014951 218 LKPTMFSGVP 227 (415)
Q Consensus 218 ~~~t~~~~~P 227 (415)
.++..++...
T Consensus 145 ~~~~~li~~~ 154 (614)
T PRK08180 145 LTPGLVFADD 154 (614)
T ss_pred CCCcEEEEcC
Confidence 9999988764
No 317
>PTZ00216 acyl-CoA synthetase; Provisional
Probab=22.63 E-value=7.5e+02 Score=25.44 Aligned_cols=90 Identities=3% Similarity=-0.127 Sum_probs=66.7
Q ss_pred ceEEeecHHHHHHhhhhhhhhhhccccCCCCCEEEEeCChhhHHHHHHHHHhhhcCcEEEEeCC--CHHHHHHHHHhhCC
Q 014951 143 KGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG--DVRYLMEDIQELKP 220 (415)
Q Consensus 143 K~v~~th~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~vv~~~~--~~~~~~~~i~~~~~ 220 (415)
....+|...+...+..+...+. ..++.++|++..+++-.. -.....++++..|+..+.... +++++...++..++
T Consensus 118 ~~~~lTy~el~~~~~~lA~~L~--~~Gv~~gd~V~i~~~n~~-e~~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~ 194 (700)
T PTZ00216 118 ETRYITYAELWERIVNFGRGLA--ELGLTKGSNVAIYEETRW-EWLASIYGIWSQSMVAATVYANLGEDALAYALRETEC 194 (700)
T ss_pred CceEeEHHHHHHHHHHHHHHHH--HhCCCCCCEEEEEcCCCH-HHHHHHHHHHHcCCeEEeeCCCCCHHHHHhhhhccCc
Confidence 3568899999988887766542 236789999988887653 223346777888888776544 88899999999999
Q ss_pred eEEEeCcHHHHHHHH
Q 014951 221 TMFSGVPRVYDRIYT 235 (415)
Q Consensus 221 t~~~~~P~~~~~l~~ 235 (415)
..+++....+..+..
T Consensus 195 ~~lv~~~~~~~~l~~ 209 (700)
T PTZ00216 195 KAIVCNGKNVPNLLR 209 (700)
T ss_pred cEEEECHHHHHHHHH
Confidence 999987766655543
No 318
>PRK10595 SOS cell division inhibitor; Provisional
Probab=22.52 E-value=2.2e+02 Score=23.10 Aligned_cols=61 Identities=11% Similarity=-0.060 Sum_probs=35.4
Q ss_pred ccCCCCCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecC--C-CCCHHHHHH---HHHhcCceEEEE
Q 014951 2 RSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLY--D-TLGANAVEF---IINHAEVSIAFV 62 (415)
Q Consensus 2 ~~~Gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~--~-~~~~~~l~~---~l~~~~~~~ii~ 62 (415)
.+.||..+..+.|.-.+..+.+-++-=|++.|...+.|- | .++.++++. ..+..+.-.++.
T Consensus 74 ~~~Gl~l~rvl~v~~~~~~d~Lwa~EqaLrsG~~~aVL~Wlp~~l~~~~~RRLQlAAe~g~~l~fl~ 140 (164)
T PRK10595 74 QASGLPLTKVMQLSQLSPCHTVEAMERALRTGNYSVVLGWLPDELTEEEHARLVDAAQEGNAMGFIM 140 (164)
T ss_pred HHcCCCcccEEEEecCCcHHHHHHHHHHHhhCCCcEEEECCcccCCHHHHHHHHHHHHhCCCEEEEE
Confidence 456777666666666677777777777777775433332 2 555554333 333444444443
No 319
>PRK09275 aspartate aminotransferase; Provisional
Probab=22.05 E-value=2.9e+02 Score=27.35 Aligned_cols=55 Identities=9% Similarity=0.219 Sum_probs=26.2
Q ss_pred CCCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCC------CCCHHHHHHHHHhcCceEEEE
Q 014951 6 VNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYD------TLGANAVEFIINHAEVSIAFV 62 (415)
Q Consensus 6 v~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~------~~~~~~l~~~l~~~~~~~ii~ 62 (415)
+.|||.|++..|--+.+. ........|+.+++++. ..+.+++...+ .-++++++.
T Consensus 187 l~pGD~Vlv~~P~y~~Y~-~~~~l~g~~~~~v~v~~~~~~~f~~d~~~l~~~~-~~~tkai~l 247 (527)
T PRK09275 187 LKAGDKIALMTPIFTPYL-EIPELPRYDLEVVHINADEENEWQYPDSELEKLR-DPSIKALFL 247 (527)
T ss_pred CCCCCEEEEeCCChHHHH-HHHHHcCCCeEEEEeecCcccCCCCCHHHHHhhc-CCCCCEEEE
Confidence 467777777666443332 22223344555555531 13345555533 234555543
No 320
>TIGR02275 DHB_AMP_lig 2,3-dihydroxybenzoate-AMP ligase. Proteins in this family belong to the AMP-binding enzyme family (pfam00501). Members activate 2,3-dihydroxybenzoate (DHB) by ligation of AMP from ATP with the release of pyrophosphate; many are involved in synthesis of siderophores such as enterobactin, vibriobactin, vulnibactin, etc. The most closely related proteine believed to differ in function activates salicylate rather than DHB.
Probab=22.00 E-value=5e+02 Score=25.34 Aligned_cols=80 Identities=11% Similarity=-0.039 Sum_probs=59.0
Q ss_pred EeecHHHHHHhhhhhhhhhhccccCCCCCEEEEeCChhhHHHHHHHHHhhhcCcEEEEeCC--CHHHHHHHHHhhCCeEE
Q 014951 146 VLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTMF 223 (415)
Q Consensus 146 ~~th~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~vv~~~~--~~~~~~~~i~~~~~t~~ 223 (415)
.+|...+...+..+...+. ..++.+++++...++-... ....+++++..|+..+.... .+.++...+++.++..+
T Consensus 48 ~~Ty~el~~~~~~~a~~L~--~~g~~~g~~V~i~~~~~~~-~~~~~la~~~~G~~~v~~~~~~~~~~~~~~l~~~~~~~l 124 (527)
T TIGR02275 48 QWSYRELDQRADNLAAGLT--KLGIGQGDTAVVQLPNIAE-FYIVFFALLKLGIAPVLALFSHRKSELTAYAQQIEPALY 124 (527)
T ss_pred eecHHHHHHHHHHHHHHHH--HcCCCCCCEEEEECCCcHH-HHHHHHHHHHcCeEEeccccccCHHHHHHHHHhcCCcEE
Confidence 6899999888877766543 2367788999888765432 22346677888988776554 78899999999999998
Q ss_pred EeCcH
Q 014951 224 SGVPR 228 (415)
Q Consensus 224 ~~~P~ 228 (415)
...+.
T Consensus 125 i~~~~ 129 (527)
T TIGR02275 125 IIDRA 129 (527)
T ss_pred EEcCc
Confidence 87654
No 321
>PLN02723 3-mercaptopyruvate sulfurtransferase
Probab=21.96 E-value=95 Score=28.35 Aligned_cols=35 Identities=11% Similarity=-0.083 Sum_probs=29.5
Q ss_pred cCCCCCCCeEEEEcCCcHhHHHHHHHHHHcCCEEE
Q 014951 3 SRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYV 37 (415)
Q Consensus 3 ~~Gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~ 37 (415)
++|+.+++.|.++|..+.....+++++..+|..-+
T Consensus 263 ~~gi~~~~~iv~yC~sG~~A~~~~~~L~~~G~~~v 297 (320)
T PLN02723 263 QEGISLDSPIVASCGTGVTACILALGLHRLGKTDV 297 (320)
T ss_pred hcCCCCCCCEEEECCcHHHHHHHHHHHHHcCCCCe
Confidence 46899999999999999988888899888886433
No 322
>PRK02991 D-serine dehydratase; Provisional
Probab=21.44 E-value=4e+02 Score=25.66 Aligned_cols=56 Identities=5% Similarity=-0.184 Sum_probs=42.5
Q ss_pred EEEcCCcHhHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEcCCChh
Q 014951 13 GIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIP 68 (415)
Q Consensus 13 ~l~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~ 68 (415)
.+....+-.-..+.+++...|..+..+-|...+......++..++++++++..+..
T Consensus 160 VV~aSsGN~G~alA~aA~~~G~~~tIvvP~~a~~~K~~~ir~~GAeVi~~~~~~~~ 215 (441)
T PRK02991 160 IAVGSTGNLGLSIGIMSAALGFKVTVHMSADARQWKKDKLRSHGVTVVEYEGDYGV 215 (441)
T ss_pred EEEECCcHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHhCCCEEEEECCCHHH
Confidence 34445555566677888999998888777777777778899999999999876443
No 323
>TIGR03801 asp_4_decarbox aspartate 4-decarboxylase. This enzyme, aspartate 4-decarboxylase (EC 4.1.1.12), removes the side-chain carboxylate from L-aspartate, converting it to L-alanine plus carbon dioxide. It is a PLP-dependent enzyme, homologous to aspartate aminotransferase (EC 2.6.1.1).
Probab=21.38 E-value=2.8e+02 Score=27.41 Aligned_cols=55 Identities=11% Similarity=0.193 Sum_probs=28.7
Q ss_pred CCCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCCC-----------CCHHHHHHHHHhcCceEEEE
Q 014951 6 VNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDT-----------LGANAVEFIINHAEVSIAFV 62 (415)
Q Consensus 6 v~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~~-----------~~~~~l~~~l~~~~~~~ii~ 62 (415)
+.|||.|++..|--+.+.. .......|+.+++++.. .+.+++...+ .-++++++.
T Consensus 181 l~pGD~Vlv~~P~y~~y~~-~~~l~~~g~~vv~i~~~~~~~~g~~~~~~d~~~l~~~~-~~~~kai~l 246 (521)
T TIGR03801 181 LKKGDKIALMTPIFTPYLE-IPELPRYDFEVVRIKADEMTEDGTHTWQYPDKELEKLR-DPSIKALFV 246 (521)
T ss_pred CCCCCEEEEeCCCcHHHHH-HHHHhcCCcEEEEeecccccccccccCCCCHHHHHHhc-CCCCcEEEE
Confidence 4678887777775554432 22233446666655431 2345555533 235565554
No 324
>cd08230 glucose_DH Glucose dehydrogenase. Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai
Probab=21.30 E-value=3.1e+02 Score=25.20 Aligned_cols=54 Identities=9% Similarity=-0.005 Sum_probs=35.8
Q ss_pred CCCCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCCCC-CHHHHHHHHHhcCceEE
Q 014951 5 GVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTL-GANAVEFIINHAEVSIA 60 (415)
Q Consensus 5 Gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~~~-~~~~l~~~l~~~~~~~i 60 (415)
++++|++|+|...-.+-.+++++|-. .|+.++.+...- +.+.+. +++..+++.+
T Consensus 169 ~~~~g~~vlI~G~G~vG~~a~q~ak~-~G~~vi~~~~~~~~~~~~~-~~~~~Ga~~v 223 (355)
T cd08230 169 PTWNPRRALVLGAGPIGLLAALLLRL-RGFEVYVLNRRDPPDPKAD-IVEELGATYV 223 (355)
T ss_pred ccCCCCEEEEECCCHHHHHHHHHHHH-cCCeEEEEecCCCCHHHHH-HHHHcCCEEe
Confidence 46789999999876677777766554 577766665432 344443 5667777754
No 325
>PRK05968 hypothetical protein; Provisional
Probab=20.82 E-value=4e+02 Score=25.09 Aligned_cols=87 Identities=17% Similarity=0.143 Sum_probs=0.0
Q ss_pred EEecCCCCCCCceEEeecHHHHHHhhhhhhhhhhccccCCCCCEEEEeCChhhHHHHHHHHHhhhcCcEEEEeCC-CHHH
Q 014951 132 IMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG-DVRY 210 (415)
Q Consensus 132 i~~TSGtTG~pK~v~~th~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~vv~~~~-~~~~ 210 (415)
++++||+++ +...+.. .++++|.++...+.++..-..+....-..|..+.+.+. +++.
T Consensus 82 v~~~sG~~A-----------i~~al~a----------l~~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~~v~~vd~~d~~~ 140 (389)
T PRK05968 82 RGFASGMAA-----------ISSTVLS----------FVEPGDRIVAVRHVYPDAFRLFETILKRMGVEVDYVDGRDEEA 140 (389)
T ss_pred EEECCHHHH-----------HHHHHHH----------HhCCCCEEEEeCCCchHHHHHHHHHHHHcCceEEEeCCCCHHH
Q ss_pred HHHHHHhhC------CeEEEeCcHHHHHHHHHHHH
Q 014951 211 LMEDIQELK------PTMFSGVPRVYDRIYTGISN 239 (415)
Q Consensus 211 ~~~~i~~~~------~t~~~~~P~~~~~l~~~~~~ 239 (415)
+.+.+.+.+ |+.......-++.+.+....
T Consensus 141 l~~~i~~tklV~ie~pt~~~~~~~dl~~i~~la~~ 175 (389)
T PRK05968 141 VAKALPGAKLLYLESPTSWVFELQDVAALAALAKR 175 (389)
T ss_pred HHHhcccCCEEEEECCCCCCCcHHHHHHHHHHHHH
No 326
>KOG1138 consensus Predicted cleavage and polyadenylation specificity factor (CPSF subunit) [RNA processing and modification]
Probab=20.65 E-value=1e+02 Score=29.78 Aligned_cols=65 Identities=14% Similarity=0.169 Sum_probs=44.8
Q ss_pred CCCCCeEEEEcCC-cHhHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEcCCChhhh
Q 014951 6 VNPGDRCGIYGSN-CPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSI 70 (415)
Q Consensus 6 v~~gd~V~l~~~n-~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~ 70 (415)
..|...|...-|+ +.+.+.+=|-=+...++.+|++.++.-+.+..++...+|+++++.+++....
T Consensus 415 ~sp~NsvI~tdpD~~~~~vl~PfrpLamK~i~cpidtrlnfqql~kLlkelqPk~vlcpeaytqp~ 480 (653)
T KOG1138|consen 415 LSPKNSVIFTDPDFSYLLVLAPFRPLAMKIIYCPIDTRLNFQQLPKLLKELQPKIVLCPEAYTQPI 480 (653)
T ss_pred CCCCCceEEeCCCCchhhhhcCCccccceeEeccccccccHHHHHHHHHHhCCCEEEChhhhcCCC
Confidence 3333444444332 3333333344455668889999999999999999999999999988765543
No 327
>PLN02409 serine--glyoxylate aminotransaminase
Probab=20.62 E-value=4.1e+02 Score=25.02 Aligned_cols=57 Identities=7% Similarity=0.098 Sum_probs=30.6
Q ss_pred CCCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCC----CCCHHHHHHHHHh---cCceEEEEc
Q 014951 6 VNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYD----TLGANAVEFIINH---AEVSIAFVQ 63 (415)
Q Consensus 6 v~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~----~~~~~~l~~~l~~---~~~~~ii~~ 63 (415)
+++||.|.+..+...... ..-.+-+.|+.+..++. ..+.+++...++. .++++++..
T Consensus 81 ~~~Gd~Vlv~~~~~~~~~-~~~~~~~~g~~v~~v~~~~~~~~~~~~l~~~l~~~~~~~~k~v~~~ 144 (401)
T PLN02409 81 LSPGDKVVSFRIGQFSLL-WIDQMQRLNFDVDVVESPWGQGADLDILKSKLRQDTNHKIKAVCVV 144 (401)
T ss_pred CCCCCEEEEeCCCchhHH-HHHHHHHcCCceEEEECCCCCCCCHHHHHHHHhhCcCCCccEEEEE
Confidence 567888777664433222 12234455655554432 2456777777765 256655554
No 328
>PRK03317 histidinol-phosphate aminotransferase; Provisional
Probab=20.59 E-value=4.1e+02 Score=24.53 Aligned_cols=53 Identities=15% Similarity=0.125 Sum_probs=23.4
Q ss_pred CCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCC----CCCHHHHHHHHHhcCceEEEE
Q 014951 7 NPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYD----TLGANAVEFIINHAEVSIAFV 62 (415)
Q Consensus 7 ~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~----~~~~~~l~~~l~~~~~~~ii~ 62 (415)
++||.|++..|.-..+. .++...|..+++++. ....+.+...++..++++++.
T Consensus 110 ~~gd~v~v~~P~y~~~~---~~~~~~g~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~i~l 166 (368)
T PRK03317 110 GPGRTALGFVPSYSMHP---IIARGTHTEWVEGPRAADFTLDVDAAVAAIAEHRPDVVFL 166 (368)
T ss_pred CCCCEEEEeCCChHHHH---HHHHhcCCeeEEcccCCCCCCCHHHHHHHHhccCCCEEEE
Confidence 45666555544333322 223345554444421 233445555554444554443
No 329
>cd02065 B12-binding_like B12 binding domain (B12-BD). Most of the members bind different cobalamid derivates, like B12 (adenosylcobamide) or methylcobalamin or methyl-Co(III) 5-hydroxybenzimidazolylcobamide. This domain is found in several enzymes, such as glutamate mutase, methionine synthase and methylmalonyl-CoA mutase. Cobalamin undergoes a conformational change on binding the protein; the dimethylbenzimidazole group, which is coordinated to the cobalt in the free cofactor, moves away from the corrin and is replaced by a histidine contributed by the protein. The sequence Asp-X-His-X-X-Gly, which contains this histidine ligand, is conserved in many cobalamin-binding proteins. Not all members of this family contain the conserved binding motif.
Probab=20.34 E-value=3.7e+02 Score=19.92 Aligned_cols=46 Identities=7% Similarity=-0.037 Sum_probs=37.9
Q ss_pred hHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEcCCC
Q 014951 21 EWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENK 66 (415)
Q Consensus 21 ~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~ii~~~~~ 66 (415)
........+-..|..+..+.+..+.+.+...+...+|++|..+-..
T Consensus 15 g~~~~~~~l~~~G~~v~~l~~~~~~~~~~~~i~~~~pdiV~iS~~~ 60 (125)
T cd02065 15 GKNIVAIALRDNGFEVIDLGVDVPPEEIVEAAKEEDADVVGLSALS 60 (125)
T ss_pred HHHHHHHHHHHCCCEEEEcCCCCCHHHHHHHHHHcCCCEEEEecch
Confidence 3444555678899999999999999999999999999998887643
No 330
>TIGR03881 KaiC_arch_4 KaiC domain protein, PAE1156 family. Members of this protein family are archaeal single-domain KaiC_related proteins, homologous to the Cyanobacterial circadian clock cycle protein KaiC, an autokinase/autophosphorylase that has two copies of the domain.
Probab=20.30 E-value=4.3e+02 Score=22.40 Aligned_cols=53 Identities=6% Similarity=-0.090 Sum_probs=36.6
Q ss_pred CCCCCCCeEEEEcCCcH--hHHHHHH--HHHHcCCEEEecCCCCCHHHHHHHHHhcC
Q 014951 4 RGVNPGDRCGIYGSNCP--EWIIAME--ACNSQAITYVPLYDTLGANAVEFIINHAE 56 (415)
Q Consensus 4 ~Gv~~gd~V~l~~~n~~--~~~~~~l--A~~~~G~~~~~l~~~~~~~~l~~~l~~~~ 56 (415)
-|+.+|+.++|..+++. ..++..+ +.+..|-.++.+....+++++....+..+
T Consensus 15 GGi~~G~~~~i~G~~G~GKT~l~~~~~~~~~~~g~~~~~is~e~~~~~i~~~~~~~g 71 (229)
T TIGR03881 15 GGIPRGFFVAVTGEPGTGKTIFCLHFAYKGLRDGDPVIYVTTEESRESIIRQAAQFG 71 (229)
T ss_pred CCCcCCeEEEEECCCCCChHHHHHHHHHHHHhcCCeEEEEEccCCHHHHHHHHHHhC
Confidence 48999999999999874 2333322 24566777777777778877766554444
No 331
>KOG2862 consensus Alanine-glyoxylate aminotransferase AGT1 [General function prediction only]
Probab=20.02 E-value=6.8e+02 Score=22.90 Aligned_cols=82 Identities=10% Similarity=0.114 Sum_probs=0.0
Q ss_pred CCCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCCC----CCHHHHHHHHHhcCceEEEEcC-----CChhhhhhcCcc
Q 014951 6 VNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDT----LGANAVEFIINHAEVSIAFVQE-----NKIPSILSCLPR 76 (415)
Q Consensus 6 v~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~~----~~~~~l~~~l~~~~~~~ii~~~-----~~~~~~~~~~~~ 76 (415)
+.|||+|.+... +..---+.=-.-+.|+.+=++... .+-+++..-|.+.+|++++... .....+.+...+
T Consensus 89 lePgd~vLv~~~-G~wg~ra~D~~~r~ga~V~~v~~~~G~~~~le~i~~~lsqh~p~~vfv~hgdsSTgV~q~~~~~~g~ 167 (385)
T KOG2862|consen 89 LEPGDNVLVVST-GTWGQRAADCARRYGAEVDVVEADIGQAVPLEEITEKLSQHKPKAVFVTHGDSSTGVLQDLLAISGE 167 (385)
T ss_pred cCCCCeEEEEEe-chHHHHHHHHHHhhCceeeEEecCcccCccHHHHHHHHHhcCCceEEEEecCccccccchHHHHHHH
Q ss_pred CCCCccEEEEec
Q 014951 77 CCLYLKTIVSFA 88 (415)
Q Consensus 77 ~~~~~~~v~~~~ 88 (415)
.+...+..+.+|
T Consensus 168 lc~k~~~lllVD 179 (385)
T KOG2862|consen 168 LCHKHEALLLVD 179 (385)
T ss_pred HhhcCCeEEEEe
Done!