Query 014951
Match_columns 415
No_of_seqs 163 out of 2099
Neff 10.6
Searched_HMMs 29240
Date Mon Mar 25 04:02:46 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014951.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/014951hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1v25_A Long-chain-fatty-acid-C 100.0 2.7E-57 9.2E-62 442.6 36.1 349 1-415 64-427 (541)
2 3rix_A Luciferase, luciferin 4 100.0 2.2E-57 7.6E-62 444.3 32.1 355 1-415 67-431 (550)
3 3g7s_A Long-chain-fatty-acid-- 100.0 6.8E-57 2.3E-61 440.8 35.2 349 1-415 69-431 (549)
4 3ni2_A 4-coumarate:COA ligase; 100.0 4.4E-57 1.5E-61 440.8 30.8 353 1-415 66-426 (536)
5 3o83_A Peptide arylation enzym 100.0 3.5E-56 1.2E-60 435.1 34.5 350 1-415 72-431 (544)
6 2d1s_A Luciferase, luciferin 4 100.0 2.4E-56 8.1E-61 436.4 32.7 354 1-415 69-433 (548)
7 1mdb_A 2,3-dihydroxybenzoate-A 100.0 1.4E-56 4.7E-61 437.4 29.8 346 1-415 67-422 (539)
8 3r44_A Fatty acyl COA syntheta 100.0 2.6E-56 8.8E-61 433.3 31.3 344 1-415 60-405 (517)
9 4fuq_A Malonyl COA synthetase; 100.0 1.4E-56 4.7E-61 433.8 28.1 344 1-415 45-391 (503)
10 3etc_A AMP-binding protein; ad 100.0 8E-56 2.7E-60 434.7 33.7 349 1-415 103-467 (580)
11 3c5e_A Acyl-coenzyme A synthet 100.0 5.3E-55 1.8E-59 428.4 36.1 347 1-415 90-448 (570)
12 1t5h_X 4-chlorobenzoyl COA lig 100.0 3.3E-55 1.1E-59 424.7 33.2 336 1-415 46-394 (504)
13 2v7b_A Benzoate-coenzyme A lig 100.0 4.4E-55 1.5E-59 426.5 33.0 352 1-415 65-421 (529)
14 3ivr_A Putative long-chain-fat 100.0 7.1E-55 2.4E-59 423.0 32.6 340 1-415 48-390 (509)
15 3rg2_A Enterobactin synthase c 100.0 2.1E-54 7.2E-59 428.5 34.8 350 1-415 67-426 (617)
16 1pg4_A Acetyl-COA synthetase; 100.0 6.5E-55 2.2E-59 434.0 31.1 360 1-415 124-509 (652)
17 3t5a_A Long-chain-fatty-acid-- 100.0 3.3E-55 1.1E-59 422.9 27.4 342 1-415 75-474 (480)
18 4gr5_A Non-ribosomal peptide s 100.0 9.3E-55 3.2E-59 427.3 30.6 329 1-415 117-461 (570)
19 1ry2_A Acetyl-coenzyme A synth 100.0 2.5E-54 8.6E-59 430.0 30.9 359 3-415 133-518 (663)
20 4dg8_A PA1221; ANL superfamily 100.0 4.3E-54 1.5E-58 424.8 31.0 328 1-415 69-411 (620)
21 3nyq_A Malonyl-COA ligase; A/B 100.0 2E-53 7E-58 411.6 33.9 331 4-415 63-397 (505)
22 1amu_A GRSA, gramicidin synthe 100.0 8E-54 2.7E-58 419.4 28.8 329 1-415 81-422 (563)
23 3tsy_A Fusion protein 4-coumar 100.0 2.4E-53 8.3E-58 441.7 31.1 358 1-415 105-473 (979)
24 3l8c_A D-alanine--poly(phospho 100.0 1E-53 3.6E-58 416.1 26.4 337 1-415 46-395 (521)
25 3fce_A D-alanine--poly(phospho 100.0 1E-53 3.5E-58 415.1 23.3 334 1-415 43-391 (512)
26 3e7w_A D-alanine--poly(phospho 100.0 8.3E-53 2.9E-57 408.5 27.9 330 4-415 47-390 (511)
27 3kxw_A Saframycin MX1 syntheta 100.0 6E-53 2.1E-57 417.2 26.8 344 1-415 57-450 (590)
28 3ite_A SIDN siderophore synthe 100.0 2.8E-52 9.7E-57 409.6 31.2 341 1-415 72-419 (562)
29 3ipl_A 2-succinylbenzoate--COA 100.0 1.8E-52 6E-57 405.6 28.5 340 8-415 47-390 (501)
30 3gqw_A Fatty acid AMP ligase; 100.0 2.3E-52 7.8E-57 412.1 29.8 342 1-415 66-453 (576)
31 2vsq_A Surfactin synthetase su 100.0 3.1E-50 1.1E-54 428.3 34.3 333 1-415 506-853 (1304)
32 4gs5_A Acyl-COA synthetase (AM 100.0 4.7E-36 1.6E-40 276.7 15.2 208 126-415 36-243 (358)
33 3qov_A Phenylacetate-coenzyme 100.0 4E-34 1.4E-38 271.9 22.5 230 123-414 81-313 (436)
34 2y27_A Phenylacetate-coenzyme 100.0 1.3E-33 4.5E-38 268.4 25.4 247 105-415 70-320 (437)
35 2y4o_A Phenylacetate-coenzyme 100.0 1.9E-33 6.6E-38 267.7 24.6 247 105-415 72-322 (443)
36 3hgu_A EHPF; phenazine, antibi 100.0 7.9E-31 2.7E-35 243.7 21.0 200 124-379 88-320 (369)
37 4b2g_A GH3-1 auxin conjugating 97.3 0.0048 1.6E-07 59.3 14.1 32 124-155 96-128 (609)
38 4eql_A 4-substituted benzoates 97.2 0.013 4.6E-07 56.1 16.4 32 124-155 90-122 (581)
39 4epl_A Jasmonic acid-amido syn 96.1 0.017 5.9E-07 55.2 8.9 32 124-155 95-127 (581)
40 3g7s_A Long-chain-fatty-acid-- 76.8 35 0.0012 32.3 13.1 106 126-235 33-140 (549)
41 3ivr_A Putative long-chain-fat 76.5 26 0.0009 32.8 12.0 98 126-235 20-119 (509)
42 1v25_A Long-chain-fatty-acid-C 75.9 38 0.0013 32.0 13.0 101 126-234 32-134 (541)
43 3rix_A Luciferase, luciferin 4 75.3 10 0.00035 36.1 8.8 88 145-235 49-138 (550)
44 2y27_A Phenylacetate-coenzyme 74.3 7.4 0.00025 35.8 7.3 87 3-90 128-221 (437)
45 3ni2_A 4-coumarate:COA ligase; 74.1 26 0.00089 33.2 11.3 101 125-235 35-137 (536)
46 3qov_A Phenylacetate-coenzyme 73.5 8.7 0.0003 35.3 7.6 87 4-91 125-218 (436)
47 2y4o_A Phenylacetate-coenzyme 70.9 8.7 0.0003 35.4 7.0 87 3-90 130-223 (443)
48 1t5h_X 4-chlorobenzoyl COA lig 68.0 53 0.0018 30.7 11.9 98 126-233 16-117 (504)
49 3t5a_A Long-chain-fatty-acid-- 68.0 68 0.0023 29.5 12.6 107 125-235 37-148 (480)
50 1amu_A GRSA, gramicidin synthe 67.7 61 0.0021 30.8 12.4 85 145-232 63-149 (563)
51 4gr5_A Non-ribosomal peptide s 67.7 22 0.00074 34.1 9.2 89 3-91 248-338 (570)
52 1ry2_A Acetyl-coenzyme A synth 67.6 51 0.0018 32.2 12.0 100 125-229 95-196 (663)
53 3ipl_A 2-succinylbenzoate--COA 66.7 30 0.001 32.3 9.8 86 4-90 199-285 (501)
54 4fuq_A Malonyl COA synthetase; 66.0 49 0.0017 30.9 11.2 84 146-232 28-113 (503)
55 3c5e_A Acyl-coenzyme A synthet 64.9 83 0.0028 29.9 12.7 102 125-233 56-160 (570)
56 3etc_A AMP-binding protein; ad 63.4 56 0.0019 31.2 11.2 97 125-228 69-167 (580)
57 2v7b_A Benzoate-coenzyme A lig 61.6 46 0.0016 31.3 10.2 87 145-234 47-135 (529)
58 4dg8_A PA1221; ANL superfamily 61.3 30 0.001 33.5 8.9 89 4-92 199-289 (620)
59 3r44_A Fatty acyl COA syntheta 60.2 64 0.0022 30.2 10.8 98 126-233 30-129 (517)
60 1pg4_A Acetyl-COA synthetase; 59.5 82 0.0028 30.6 11.7 97 126-228 90-188 (652)
61 4h1h_A LMO1638 protein; MCCF-l 58.6 37 0.0013 29.8 8.2 60 5-64 8-86 (327)
62 3hgu_A EHPF; phenazine, antibi 58.4 26 0.0009 31.1 7.4 68 2-71 128-220 (369)
63 3tsy_A Fusion protein 4-coumar 58.2 37 0.0013 35.0 9.4 100 125-234 74-175 (979)
64 3sr3_A Microcin immunity prote 56.3 43 0.0015 29.6 8.2 61 5-65 9-88 (336)
65 3tbh_A O-acetyl serine sulfhyd 56.1 25 0.00085 31.0 6.7 60 6-65 68-127 (334)
66 3kxw_A Saframycin MX1 syntheta 55.9 1.2E+02 0.0042 28.7 12.2 102 125-234 24-130 (590)
67 2d1s_A Luciferase, luciferin 4 55.8 45 0.0015 31.6 9.0 88 145-235 51-140 (548)
68 3o83_A Peptide arylation enzym 55.5 82 0.0028 29.7 10.8 92 125-228 43-136 (544)
69 3ezx_A MMCP 1, monomethylamine 53.7 65 0.0022 26.2 8.4 53 173-225 92-149 (215)
70 4e5s_A MCCFLIKE protein (BA_56 52.1 48 0.0016 29.2 7.8 60 5-64 8-86 (331)
71 3tla_A MCCF; serine protease, 51.9 49 0.0017 29.7 7.8 60 5-64 39-117 (371)
72 3vc3_A Beta-cyanoalnine syntha 50.8 34 0.0012 30.3 6.7 60 6-65 83-142 (344)
73 3l8c_A D-alanine--poly(phospho 50.6 95 0.0032 29.0 10.3 81 145-228 28-110 (521)
74 1mdb_A 2,3-dihydroxybenzoate-A 50.5 69 0.0024 30.2 9.3 86 4-90 218-309 (539)
75 4eez_A Alcohol dehydrogenase 1 49.9 23 0.00078 31.3 5.5 58 3-63 158-215 (348)
76 3fce_A D-alanine--poly(phospho 48.8 94 0.0032 29.0 9.9 78 146-226 26-105 (512)
77 3gqw_A Fatty acid AMP ligase; 44.0 1.7E+02 0.0057 27.6 11.0 87 145-234 48-143 (576)
78 3s2e_A Zinc-containing alcohol 43.5 49 0.0017 29.0 6.6 59 2-64 160-218 (340)
79 1eg5_A Aminotransferase; PLP-d 43.4 50 0.0017 29.1 6.8 57 6-63 86-146 (384)
80 3e7w_A D-alanine--poly(phospho 42.9 1.3E+02 0.0046 27.9 10.0 80 145-226 25-106 (511)
81 3dzz_A Putative pyridoxal 5'-p 42.3 60 0.0021 28.7 7.2 56 6-64 106-168 (391)
82 3ite_A SIDN siderophore synthe 41.9 2.3E+02 0.0077 26.7 11.7 99 125-228 33-135 (562)
83 1h2b_A Alcohol dehydrogenase; 41.1 54 0.0018 29.1 6.5 58 4-64 182-239 (359)
84 1zsy_A Mitochondrial 2-enoyl t 40.3 80 0.0027 27.9 7.6 59 4-63 163-223 (357)
85 3tqh_A Quinone oxidoreductase; 40.1 45 0.0015 29.0 5.8 56 3-63 147-203 (321)
86 3two_A Mannitol dehydrogenase; 39.9 48 0.0016 29.2 6.0 55 3-61 171-225 (348)
87 2cf5_A Atccad5, CAD, cinnamyl 39.7 38 0.0013 30.0 5.3 58 3-63 174-232 (357)
88 3jv7_A ADH-A; dehydrogenase, n 39.7 60 0.002 28.5 6.6 58 5-65 168-225 (345)
89 3ju7_A Putative PLP-dependent 38.9 55 0.0019 29.2 6.3 56 5-63 74-136 (377)
90 2e7j_A SEP-tRNA:Cys-tRNA synth 38.8 1.2E+02 0.0041 26.5 8.6 56 6-64 90-155 (371)
91 3ri6_A O-acetylhomoserine sulf 38.1 81 0.0028 28.8 7.4 26 303-328 356-382 (430)
92 3a2b_A Serine palmitoyltransfe 37.5 1.1E+02 0.0038 27.1 8.2 55 6-64 124-181 (398)
93 2vsq_A Surfactin synthetase su 36.9 62 0.0021 34.6 7.2 89 3-91 641-732 (1304)
94 3uog_A Alcohol dehydrogenase; 36.7 83 0.0028 27.8 7.1 57 2-62 183-239 (363)
95 2ch1_A 3-hydroxykynurenine tra 36.3 96 0.0033 27.4 7.6 57 6-63 90-150 (396)
96 3kki_A CAI-1 autoinducer synth 36.0 65 0.0022 28.9 6.4 55 6-64 140-194 (409)
97 4aec_A Cysteine synthase, mito 35.5 80 0.0027 28.9 6.7 61 4-64 168-229 (430)
98 3fpc_A NADP-dependent alcohol 35.2 43 0.0015 29.5 4.9 56 3-62 161-217 (352)
99 3zrp_A Serine-pyruvate aminotr 33.9 1.2E+02 0.0042 26.5 7.8 58 6-64 74-135 (384)
100 1yqd_A Sinapyl alcohol dehydro 33.1 77 0.0026 28.1 6.2 57 3-62 181-238 (366)
101 3isl_A Purine catabolism prote 32.8 1.2E+02 0.004 27.1 7.6 58 6-64 83-144 (416)
102 3kax_A Aminotransferase, class 32.7 1.3E+02 0.0043 26.4 7.7 54 6-63 103-163 (383)
103 3rg2_A Enterobactin synthase c 32.6 1.9E+02 0.0064 27.7 9.3 91 126-228 39-131 (617)
104 4eb5_A Probable cysteine desul 32.4 56 0.0019 28.8 5.3 56 7-63 86-145 (382)
105 2bkw_A Alanine-glyoxylate amin 32.4 1.6E+02 0.0053 25.8 8.3 57 7-64 84-145 (385)
106 1o69_A Aminotransferase; struc 32.3 1E+02 0.0036 27.4 7.1 57 5-64 68-130 (394)
107 4hvk_A Probable cysteine desul 32.1 72 0.0025 28.0 5.9 56 7-63 86-145 (382)
108 4ej6_A Putative zinc-binding d 31.9 57 0.002 29.1 5.2 56 3-62 177-233 (370)
109 3uko_A Alcohol dehydrogenase c 31.8 1.2E+02 0.004 27.0 7.3 57 3-63 188-245 (378)
110 3ip1_A Alcohol dehydrogenase, 31.5 1.1E+02 0.0037 27.6 7.1 56 4-63 209-265 (404)
111 2z9v_A Aspartate aminotransfer 31.4 1E+02 0.0036 27.1 6.9 58 6-64 80-142 (392)
112 1p0f_A NADP-dependent alcohol 31.3 95 0.0033 27.5 6.6 56 3-62 186-242 (373)
113 1y81_A Conserved hypothetical 31.1 1.1E+02 0.0038 22.6 5.9 58 9-69 70-127 (138)
114 3dwg_A Cysteine synthase B; su 31.0 1.2E+02 0.004 26.4 6.9 59 6-65 70-128 (325)
115 1z7w_A Cysteine synthase; tran 31.0 1.1E+02 0.0037 26.6 6.7 60 6-65 63-122 (322)
116 1gu7_A Enoyl-[acyl-carrier-pro 30.9 1.1E+02 0.0037 27.0 6.9 58 4-62 162-222 (364)
117 3i16_A Aluminum resistance pro 30.6 76 0.0026 29.0 5.8 59 6-64 112-184 (427)
118 1d2f_A MALY protein; aminotran 30.4 1.2E+02 0.0041 26.8 7.1 55 6-63 108-169 (390)
119 1f8f_A Benzyl alcohol dehydrog 30.3 1.4E+02 0.0047 26.4 7.4 58 2-63 184-242 (371)
120 3kgw_A Alanine-glyoxylate amin 30.1 1.5E+02 0.0051 26.0 7.7 58 6-64 95-156 (393)
121 1c7n_A Cystalysin; transferase 29.9 1.2E+02 0.004 27.0 7.0 54 7-63 111-171 (399)
122 3goh_A Alcohol dehydrogenase, 29.8 1.1E+02 0.0036 26.4 6.5 55 2-61 136-190 (315)
123 2q3b_A Cysteine synthase A; py 29.7 1.2E+02 0.0042 26.1 6.8 58 7-65 65-122 (313)
124 1uuf_A YAHK, zinc-type alcohol 29.6 62 0.0021 28.8 5.0 56 3-62 189-244 (369)
125 3nnk_A Ureidoglycine-glyoxylat 29.5 1.5E+02 0.005 26.3 7.6 58 6-64 85-146 (411)
126 3l6b_A Serine racemase; pyrido 29.5 1E+02 0.0035 27.2 6.3 58 8-66 75-132 (346)
127 3ly1_A Putative histidinol-pho 29.4 2E+02 0.0069 24.8 8.4 55 6-63 89-148 (354)
128 2duw_A Putative COA-binding pr 29.2 1E+02 0.0035 23.1 5.4 57 10-69 72-128 (145)
129 3cq5_A Histidinol-phosphate am 29.1 1.5E+02 0.0052 25.9 7.5 55 6-63 113-171 (369)
130 3t18_A Aminotransferase class 28.9 1.3E+02 0.0045 26.8 7.2 55 6-63 122-185 (413)
131 2z61_A Probable aspartate amin 28.8 1E+02 0.0034 27.1 6.3 52 6-63 110-161 (370)
132 3jx9_A Putative phosphoheptose 28.7 91 0.0031 24.3 5.1 39 3-41 72-112 (170)
133 3b8x_A WBDK, pyridoxamine 5-ph 28.3 1.3E+02 0.0043 26.7 6.9 55 5-63 76-135 (390)
134 3f9t_A TDC, L-tyrosine decarbo 28.1 1.7E+02 0.0057 25.7 7.7 56 5-63 119-178 (397)
135 3n75_A LDC, lysine decarboxyla 27.9 1.9E+02 0.0064 28.6 8.3 56 6-64 232-306 (715)
136 4b7c_A Probable oxidoreductase 27.9 1.9E+02 0.0066 25.0 7.9 57 3-62 144-201 (336)
137 3hvy_A Cystathionine beta-lyas 27.7 91 0.0031 28.5 5.8 58 6-64 113-184 (427)
138 2v03_A Cysteine synthase B; py 27.6 1.6E+02 0.0055 25.2 7.1 59 6-65 58-116 (303)
139 4dvj_A Putative zinc-dependent 27.3 1.3E+02 0.0044 26.6 6.6 59 3-64 161-225 (363)
140 4dq6_A Putative pyridoxal phos 27.3 1E+02 0.0036 27.1 6.2 53 6-63 111-171 (391)
141 1e5e_A MGL, methionine gamma-l 27.3 1.4E+02 0.0047 26.8 7.0 56 6-63 98-154 (404)
142 1kol_A Formaldehyde dehydrogen 27.2 87 0.003 28.1 5.6 53 3-59 180-233 (398)
143 1pl8_A Human sorbitol dehydrog 27.2 75 0.0026 28.0 5.1 56 3-62 166-222 (356)
144 3nyq_A Malonyl-COA ligase; A/B 27.0 2.1E+02 0.007 26.6 8.3 76 145-228 47-124 (505)
145 1vjo_A Alanine--glyoxylate ami 27.0 1.7E+02 0.0059 25.7 7.6 58 6-64 106-167 (393)
146 1mdo_A ARNB aminotransferase; 26.9 91 0.0031 27.6 5.7 55 5-63 75-134 (393)
147 1e3i_A Alcohol dehydrogenase, 26.6 1.2E+02 0.0041 26.9 6.3 56 3-62 190-246 (376)
148 2egu_A Cysteine synthase; O-ac 26.5 1.3E+02 0.0046 25.8 6.5 58 7-65 63-120 (308)
149 1zl0_A Hypothetical protein PA 26.4 2.1E+02 0.0072 24.7 7.5 62 4-65 12-89 (311)
150 2huf_A Alanine glyoxylate amin 26.2 1.8E+02 0.0062 25.5 7.6 58 6-64 91-152 (393)
151 2pqm_A Cysteine synthase; OASS 26.1 1.4E+02 0.0049 26.2 6.6 59 6-65 75-133 (343)
152 3lvm_A Cysteine desulfurase; s 25.5 1.5E+02 0.0053 26.4 7.0 56 8-64 112-171 (423)
153 2dr1_A PH1308 protein, 386AA l 25.4 2E+02 0.0068 25.1 7.7 58 6-64 92-154 (386)
154 2jhf_A Alcohol dehydrogenase E 25.4 1.3E+02 0.0044 26.6 6.3 56 3-62 186-242 (374)
155 3ss7_X D-serine dehydratase; t 25.3 1.5E+02 0.0052 27.1 6.9 57 12-68 162-218 (442)
156 2d59_A Hypothetical protein PH 25.3 1.3E+02 0.0044 22.4 5.3 49 10-59 79-127 (144)
157 2w8t_A SPT, serine palmitoyltr 25.2 2.4E+02 0.0082 25.3 8.3 55 6-64 145-202 (427)
158 1fc4_A 2-amino-3-ketobutyrate 25.0 2.2E+02 0.0075 25.1 7.9 55 6-64 126-185 (401)
159 3euc_A Histidinol-phosphate am 24.9 1E+02 0.0035 26.9 5.6 55 6-63 106-164 (367)
160 3tqx_A 2-amino-3-ketobutyrate 24.8 1.7E+02 0.0058 25.7 7.1 55 6-64 124-183 (399)
161 1y80_A Predicted cobalamin bin 24.7 2.6E+02 0.0091 22.2 7.9 57 9-65 88-148 (210)
162 3ndn_A O-succinylhomoserine su 24.5 1.7E+02 0.0058 26.4 7.0 56 6-63 117-173 (414)
163 1rjw_A ADH-HT, alcohol dehydro 24.5 1.2E+02 0.0043 26.3 6.0 54 4-61 160-213 (339)
164 1cdo_A Alcohol dehydrogenase; 24.5 1.4E+02 0.0048 26.4 6.4 56 3-62 187-243 (374)
165 3rq1_A Aminotransferase class 23.9 2.1E+02 0.007 25.5 7.5 55 6-63 123-186 (418)
166 1rvg_A Fructose-1,6-bisphospha 23.8 71 0.0024 27.6 4.0 81 207-326 154-236 (305)
167 3fbg_A Putative arginate lyase 23.3 2.2E+02 0.0074 24.8 7.3 58 3-64 139-203 (346)
168 3pc3_A CG1753, isoform A; CBS, 23.2 1.8E+02 0.006 27.4 7.0 58 6-64 110-167 (527)
169 3gaz_A Alcohol dehydrogenase s 23.0 2.2E+02 0.0075 24.8 7.3 53 2-59 144-197 (343)
170 4a2c_A Galactitol-1-phosphate 22.9 1.6E+02 0.0054 25.6 6.4 60 3-65 155-214 (346)
171 2dph_A Formaldehyde dismutase; 22.9 1.2E+02 0.0041 27.2 5.6 52 3-58 180-232 (398)
172 1jvb_A NAD(H)-dependent alcoho 22.6 1.8E+02 0.0062 25.3 6.7 57 3-62 165-222 (347)
173 4dup_A Quinone oxidoreductase; 22.4 2E+02 0.0069 25.1 6.9 57 2-62 161-218 (353)
174 1ni5_A Putative cell cycle pro 22.0 2.6E+02 0.0089 25.5 7.7 60 6-65 10-82 (433)
175 1vj0_A Alcohol dehydrogenase, 22.0 1.4E+02 0.0047 26.6 5.8 56 3-62 189-246 (380)
176 2fzw_A Alcohol dehydrogenase c 21.9 1.7E+02 0.006 25.7 6.5 56 3-62 185-241 (373)
177 3qwb_A Probable quinone oxidor 21.7 3.2E+02 0.011 23.5 8.1 56 4-63 144-200 (334)
178 1y7l_A O-acetylserine sulfhydr 21.6 1.7E+02 0.0058 25.2 6.2 58 7-65 60-117 (316)
179 1t3i_A Probable cysteine desul 21.6 1.3E+02 0.0045 26.7 5.7 58 6-64 115-177 (420)
180 1e3j_A NADP(H)-dependent ketos 21.4 2E+02 0.007 25.0 6.8 56 3-62 163-218 (352)
181 1ve1_A O-acetylserine sulfhydr 21.3 2.6E+02 0.0087 23.9 7.2 59 6-65 57-117 (304)
182 2cb1_A O-acetyl homoserine sul 21.3 1.6E+02 0.0053 26.5 6.1 55 6-63 92-147 (412)
183 3op7_A Aminotransferase class 21.1 1.1E+02 0.0037 26.9 4.9 54 6-63 102-161 (375)
184 1qgn_A Protein (cystathionine 21.0 2.7E+02 0.0094 25.4 7.7 58 6-64 150-208 (445)
185 2cvh_A DNA repair and recombin 21.0 2.3E+02 0.0079 22.3 6.6 49 5-54 16-68 (220)
186 3nra_A Aspartate aminotransfer 20.9 2.4E+02 0.0081 24.9 7.3 54 6-63 123-186 (407)
187 1cs1_A CGS, protein (cystathio 20.8 3.1E+02 0.011 24.0 8.0 57 6-64 88-145 (386)
188 3krt_A Crotonyl COA reductase; 20.6 2.5E+02 0.0084 25.7 7.4 56 4-63 224-280 (456)
189 3ecd_A Serine hydroxymethyltra 20.6 1.7E+02 0.0057 26.1 6.2 59 6-64 115-180 (425)
190 2bwn_A 5-aminolevulinate synth 20.6 3E+02 0.01 24.2 7.8 54 7-64 130-186 (401)
191 4a0s_A Octenoyl-COA reductase/ 20.6 1.5E+02 0.0053 27.0 6.0 56 3-62 215-271 (447)
192 3n0l_A Serine hydroxymethyltra 20.5 2E+02 0.0067 25.5 6.6 59 6-64 108-172 (417)
193 1jg8_A L-ALLO-threonine aldola 20.3 75 0.0026 27.5 3.6 57 6-63 74-139 (347)
194 2h6e_A ADH-4, D-arabinose 1-de 20.3 2.3E+02 0.0078 24.6 6.8 53 5-61 168-221 (344)
195 1piw_A Hypothetical zinc-type 20.2 1.2E+02 0.0043 26.6 5.1 56 3-62 174-229 (360)
196 2rfv_A Methionine gamma-lyase; 20.2 2.1E+02 0.0072 25.4 6.7 56 6-63 100-156 (398)
197 1elu_A L-cysteine/L-cystine C- 20.2 1.2E+02 0.0042 26.6 5.1 58 6-64 98-162 (390)
198 3cog_A Cystathionine gamma-lya 20.1 1.8E+02 0.0063 26.0 6.3 56 6-63 102-158 (403)
199 1j32_A Aspartate aminotransfer 20.1 2.2E+02 0.0075 25.0 6.8 54 6-63 111-170 (388)
No 1
>1v25_A Long-chain-fatty-acid-COA synthetase; ligase, structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: ANP; 2.30A {Thermus thermophilus} SCOP: e.23.1.1 PDB: 1ult_A* 1v26_A*
Probab=100.00 E-value=2.7e-57 Score=442.64 Aligned_cols=349 Identities=23% Similarity=0.326 Sum_probs=285.6
Q ss_pred CccCCCCCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEcCCChhhhhhcCccCCCC
Q 014951 1 MRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLY 80 (415)
Q Consensus 1 L~~~Gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~ 80 (415)
|+++|+++||+|+++++|++++++++|||+++|++++|+++.++.+++.+++++++++++|++.+..+.+...... .+.
T Consensus 64 L~~~Gv~~gd~V~i~~~n~~e~~~~~lA~~~~Gav~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~-~~~ 142 (541)
T 1v25_A 64 LRALGVGVGDRVATLGFNHFRHLEAYFAVPGMGAVLHTANPRLSPKEIAYILNHAEDKVLLFDPNLLPLVEAIRGE-LKT 142 (541)
T ss_dssp HHHTTCCTTCEEEEECCSSHHHHHHHHHHHHTTCEEEECCTTSCHHHHHHHHHHHTCSEEEECGGGHHHHHHHGGG-CSS
T ss_pred HHHcCCCCCCEEEEEcCCcHHHHHHHHHHHhcCcEEEecCcccCHHHHHHHHHhCCCcEEEEChhHHHHHHHHHhh-CCC
Confidence 4578999999999999999999999999999999999999999999999999999999999998876655544332 244
Q ss_pred ccEEEEecCCCchhhHHhhhcCceeecHHHHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEeecHHHHHHhhhh-
Q 014951 81 LKTIVSFANVSSSQKKEAEELGVSCFSWEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSV- 159 (415)
Q Consensus 81 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~~~- 159 (415)
.+.++.++.... .....++++...... .....++++++|+|||||||.||+|++||+++.......
T Consensus 143 ~~~~~~~~~~~~----------~~~~~~~~~~~~~~~---~~~~~~~~~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~ 209 (541)
T 1v25_A 143 VQHFVVMDEKAP----------EGYLAYEEALGEEAD---PVRVPERAACGMAYTTGTTGLPKGVVYSHRALVLHSLAAS 209 (541)
T ss_dssp CCEEEESSSCCC----------TTCEEHHHHCCSCCC---CCCCCTTSEEEEEEECSSSSSCEEEEEEHHHHHHHHHHTT
T ss_pred ccEEEEecCCCC----------cccccHHHHhhccCC---cccCCCCCcEEEEECCCCCCCCcEeeeehHHHHHHHhhhh
Confidence 556666554321 012345555433211 134567899999999999999999999999998776542
Q ss_pred -hhhhhhccccCCCCCEEEEeCChhhHHHHHHHHHhhhcCcEEEEeCC--CHHHHHHHHHhhCCeEEEeCcHHHHHHHHH
Q 014951 160 -DQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTMFSGVPRVYDRIYTG 236 (415)
Q Consensus 160 -~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~vv~~~~--~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~ 236 (415)
...+ .+.++|++++++|++|.+++...+.+++.|+++++.+. ++..+++.|+++++|+++++|+++..+++.
T Consensus 210 ~~~~~-----~~~~~d~~l~~~p~~h~~~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~ 284 (541)
T 1v25_A 210 LVDGT-----ALSEKDVVLPVVPMFHVNAWCLPYAATLVGAKQVLPGPRLDPASLVELFDGEGVTFTAGVPTVWLALADY 284 (541)
T ss_dssp STTTT-----CCCTTCEEEECSCTTSHHHHTHHHHHHHHTCEEEECTTCCSHHHHHHHHHHTTCCEEEECHHHHHHHHHH
T ss_pred hcccc-----cCCCCCEEEEeccchhhhHHHHHHHHHhcCceEEeeCCCCCHHHHHHHHHhcCeeEEecchHHHHHHHhh
Confidence 2222 67889999999999999998777888999999999864 999999999999999999999999998764
Q ss_pred HHHhhhcCChhhHHHHHHHHHhhhhccccCCCCCCccchhhHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHHHhcCC
Q 014951 237 ISNKISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGA 316 (415)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~~G~~~~~~~~~~~~~~~~~ 316 (415)
...... ..+++|.+++||+++++++.+++ +.+++
T Consensus 285 ~~~~~~---------------------------------------------~l~~lr~i~~gG~~l~~~~~~~~-~~~g~ 318 (541)
T 1v25_A 285 LESTGH---------------------------------------------RLKTLRRLVVGGSAAPRSLIARF-ERMGV 318 (541)
T ss_dssp HHHHTC---------------------------------------------CCSSCCEEEECSSCCCHHHHHHH-HHTTC
T ss_pred hhccCC---------------------------------------------cchhccEEEECCCCCCHHHHHHH-HHhCC
Confidence 332100 01489999999999999999999 56899
Q ss_pred ceEEeeccCCCCceeeeecCCc----------ccccCcccccccCeEEEEeecCCCCCCCCCCCCCCeEEEecCCccccc
Q 014951 317 PLTQGYGLTESCSGCFTSLADV----------FNMIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGY 386 (415)
Q Consensus 317 ~~~~~yG~tE~~~~~~~~~~~~----------~~~~~~~G~~~~g~~~~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gY 386 (415)
++++.||+||++.+++...... ....+++|+|+++++++|+| +++..++.+.++.|||+|+||+++.||
T Consensus 319 ~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d-~~g~~~~~~~~~~GEl~v~g~~v~~GY 397 (541)
T 1v25_A 319 EVRQGYGLTETSPVVVQNFVKSHLESLSEEEKLTLKAKTGLPIPLVRLRVAD-EEGRPVPKDGKALGEVQLKGPWITGGY 397 (541)
T ss_dssp EEEEEEECGGGSSEEEECCCCGGGTTSCHHHHHHHHTSCBEECTTCEEEEEC-TTSCBCCSSSCCCEEEEEESTTSBSSC
T ss_pred ceeecccccccccceecccccccccccCccccccccCCCCCcCCCcEEEEEC-CCCCCCCCCCCcceEEEEeCcchhccc
Confidence 9999999999998776554321 12347899999999999999 787766654457999999999999999
Q ss_pred cCCchhhhhhhc-CCceecCceEEEcCCCC
Q 014951 387 YKRPDLTEEVIV-DGWFHTGDIGEWQPMEL 415 (415)
Q Consensus 387 ~~~~~~~~~~~~-~g~~~TGDlg~~d~~G~ 415 (415)
|++|+.|.++|. +|||+|||+|++|+||+
T Consensus 398 ~~~p~~t~~~f~~~g~~~TGDlg~~d~dG~ 427 (541)
T 1v25_A 398 YGNEEATRSALTPDGFFRTGDIAVWDEEGY 427 (541)
T ss_dssp BTCHHHHHTTBCTTSCEEEEEEEEECTTCC
T ss_pred cCChhhhhhhccCCCCeEcCCEEEEcCCce
Confidence 999999999994 99999999999999995
No 2
>3rix_A Luciferase, luciferin 4-monooxygenase; oxidoreductase, photoprotein, luminescence, aspulvinone, natural product extracts; HET: 923; 1.70A {Photinus pyralis} SCOP: e.23.1.1 PDB: 1ba3_A 1lci_A* 4e5d_A* 3ies_A* 3iep_A* 3ier_A* 4g36_A* 4g37_A* 3qya_A
Probab=100.00 E-value=2.2e-57 Score=444.33 Aligned_cols=355 Identities=23% Similarity=0.376 Sum_probs=284.2
Q ss_pred CccCCCCCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEcCCChhhhhhcCccCCCC
Q 014951 1 MRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLY 80 (415)
Q Consensus 1 L~~~Gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~ 80 (415)
|+++|+++||+|+++++|++++++++|||+++|++++|+++.++.+++.++++.++++++|++.+....+....... +.
T Consensus 67 L~~~Gv~~gd~V~i~~~n~~e~~~~~lA~~~~Gav~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~-~~ 145 (550)
T 3rix_A 67 MKRYGLNTNHRIVVCSENSLQFFMPVLGALFIGVAVAPANDIYNERELLNSMNISQPTVVFVSKKGLQKILNVQKKL-PI 145 (550)
T ss_dssp HHHHTCCTTCEEEEECSSCTTTHHHHHHHHHHTCEEEECCTTCCHHHHHHHHHHHCCSEEEECGGGHHHHHHHHHHC-TT
T ss_pred HHHhCCCCCCEEEEEcCCcccHHHHHHHHHHcCCEEeecCCcCCHHHHHHHHHhcCCeEEEEcHHHHHHHHHHHhhC-CC
Confidence 45679999999999999999999999999999999999999999999999999999999999998777665544322 45
Q ss_pred ccEEEEecCCCchhhHHhhhcCceeecHHHHHhcCCC------C-CCCCCCCCCCeEEEEecCCCCCCCceEEeecHHHH
Q 014951 81 LKTIVSFANVSSSQKKEAEELGVSCFSWEEFLQLGTL------D-CELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIV 153 (415)
Q Consensus 81 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~-~~~~~~~~~~~~~i~~TSGtTG~pK~v~~th~~l~ 153 (415)
.+.++.++..... .....+.++...... . .+.....++++++|+|||||||.||+|++||+++.
T Consensus 146 ~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~th~~~~ 216 (550)
T 3rix_A 146 IQKIIIMDSKTDY---------QGFQSMYTFVTSHLPPGFNEYDFVPESFDRDKTIALIMNSSGSTGLPKGVALPHRTAC 216 (550)
T ss_dssp CCEEEETTCSSCB---------TTBCBHHHHHHHHCCTTCCTTTCCCCCCCTTTSEEEEEEC-----CCCEEEEEHHHHH
T ss_pred cceEEEEcCCccc---------cCcccHHHHhhccccccccccccCCCCCCCCCCEEEEEECCCcccCcchhhhhHHHHH
Confidence 5667666543211 123445555432210 1 11122345789999999999999999999999999
Q ss_pred HHhhhhhhhhhhccccCCCCCEEEEeCChhhHHHHHHHHHhhhcCcEEEEeCC-CHHHHHHHHHhhCCeEEEeCcHHHHH
Q 014951 154 AEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG-DVRYLMEDIQELKPTMFSGVPRVYDR 232 (415)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~vv~~~~-~~~~~~~~i~~~~~t~~~~~P~~~~~ 232 (415)
..+......+ ....+.++|++++++|++|.+++...+.+++.|+++++.+. ++..+++.|+++++|+++++|+++..
T Consensus 217 ~~~~~~~~~~--~~~~~~~~~~~l~~~p~~~~~g~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~ 294 (550)
T 3rix_A 217 VRFSHARDPI--FGNQIIPDTAILSVVPFHHGFGMFTTLGYLICGFRVVLMYRFEEELFLRSLQDYKIQSALLVPTLFSF 294 (550)
T ss_dssp HHHHHHTCTT--TSCCCCTTCEEEECSCTTSHHHHHHHHHHHHHTCEEEECSSCCHHHHHHHHHHTTCSEEEECHHHHHH
T ss_pred HHHHHhhhhh--ccccCCCCcEEEEechHHHHHHHHHHHHHHHcCCEEEEeCCCCHHHHHHHHHHcCCeEEEeCcHHHHH
Confidence 8876654431 11256789999999999999999888889999999999876 99999999999999999999999998
Q ss_pred HHHHHHHhhhcCChhhHHHHHHHHHhhhhccccCCCCCCccchhhHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHHH
Q 014951 233 IYTGISNKISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRV 312 (415)
Q Consensus 233 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~~G~~~~~~~~~~~~~ 312 (415)
+++.. .....++ ++||.+++||+++++++.+++.+
T Consensus 295 l~~~~-------------------------------------~~~~~~l--------~~lr~i~~gG~~l~~~~~~~~~~ 329 (550)
T 3rix_A 295 FAKST-------------------------------------LIDKYDL--------SNLHEIASGGAPLSKEVGEAVAK 329 (550)
T ss_dssp HHHCC-------------------------------------GGGGSCC--------TTCCEEEECSSCCCHHHHHHHHH
T ss_pred HHhCc-------------------------------------cccccCc--------ccccEEEEecCCCCHHHHHHHHH
Confidence 86511 1111111 48999999999999999999999
Q ss_pred hcCCc-eEEeeccCCCCceeeeecCCcccccCcccccccCeEEEEeecCCCCCCCCCCCCCCeEEEecCCccccccCCch
Q 014951 313 TSGAP-LTQGYGLTESCSGCFTSLADVFNMIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPD 391 (415)
Q Consensus 313 ~~~~~-~~~~yG~tE~~~~~~~~~~~~~~~~~~~G~~~~g~~~~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gY~~~~~ 391 (415)
.++.. +++.||+||++..++....... ..+++|+|+++++++|+|.+++ .+++.|+.|||+|+||+++.|||++|+
T Consensus 330 ~~~~~~v~~~YG~TE~~~~~~~~~~~~~-~~~~vG~~~~~~~~~i~d~~~~--~~~~~g~~GEl~v~g~~v~~GY~~~~~ 406 (550)
T 3rix_A 330 RFHLPGIRQGYGLTETTSAILITPEGDD-KPGAVGKVVPFFEAKVVDLDTG--KTLGVNQRGELCVRGPMIMSGYVNNPE 406 (550)
T ss_dssp HTTCSCCEEEEECGGGSSEEEECCTTCC-CTTEEEEECTTCEEEEECTTTC--CBCCTTCCEEEEEESTTSCSEETTCHH
T ss_pred HcCCCccccccCcCccccceecCCCCCC-CCCCcccccCCcEEEEEeCCCC--cCCCCCCCeEEEEeCCCcchhhcCChh
Confidence 99875 9999999999987776655433 4489999999999999993334 455677999999999999999999999
Q ss_pred hhhhhh-cCCceecCceEEEcCCCC
Q 014951 392 LTEEVI-VDGWFHTGDIGEWQPMEL 415 (415)
Q Consensus 392 ~~~~~~-~~g~~~TGDlg~~d~~G~ 415 (415)
.|.+.| .+|||+|||+|++|+||+
T Consensus 407 ~t~~~~~~~g~~~TGDl~~~~~dG~ 431 (550)
T 3rix_A 407 ATNALIDKDGWLHSGDIAYWDEDEH 431 (550)
T ss_dssp HHHHHBCTTSCEEEEEEEEECTTCC
T ss_pred hhhhhcCCCCCeecCcEEEEeCCce
Confidence 999999 799999999999999995
No 3
>3g7s_A Long-chain-fatty-acid--COA ligase (FADD-1); protein structure initiative, PSI-II, NYSGXRC, 11193J, structural genomics; 2.15A {Archaeoglobus fulgidus dsm 4304}
Probab=100.00 E-value=6.8e-57 Score=440.79 Aligned_cols=349 Identities=25% Similarity=0.331 Sum_probs=290.8
Q ss_pred CccCCCCCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEcCCChhhhhhcCccCCCC
Q 014951 1 MRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLY 80 (415)
Q Consensus 1 L~~~Gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~ 80 (415)
|+++|+++||+|+|+++|++++++++|||+++|++++||+|.++.+++.+++++++++++|++....+.+....... .
T Consensus 69 L~~~Gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~vpl~~~~~~~~l~~il~~~~~~~~i~~~~~~~~~~~~~~~~--~ 146 (549)
T 3g7s_A 69 ISRKGVRKGEHVGVCIPNSIDYVMTIYALWRVAATPVPINPMYKSFELEHILNDSEATTLVVHSMLYENFKPVLEKT--G 146 (549)
T ss_dssp HHHTTCCTTCEEEEECCSSHHHHHHHHHHHHTTCEEEECCTTCCHHHHHHHHHHTTCSEEEEEGGGHHHHHHHHTTS--C
T ss_pred HHHcCCCCCCEEEEECCCCHHHHHHHHHHHHhCCEEEccCCCCCHHHHHHHHHhcCCCEEEEChHHHHHHHHHHhhC--C
Confidence 45789999999999999999999999999999999999999999999999999999999999998777665544332 2
Q ss_pred ccEEEEecCCCchhhHHhhhcCceeecHHHHHhcCCCCCCCCCCCC-CCeEEEEecCCCCCCCceEEeecHHHHHHhhhh
Q 014951 81 LKTIVSFANVSSSQKKEAEELGVSCFSWEEFLQLGTLDCELPPKKK-TNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSV 159 (415)
Q Consensus 81 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~~~ 159 (415)
.+.++..+.. ...+.++..............+ +|+++|+|||||||.||+|++||+++...+...
T Consensus 147 ~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~ 212 (549)
T 3g7s_A 147 VERVFVVGGE--------------VNSLSEVMDSGSEDFENVKVNPEEDVALIPYTGGTTGMPKGVMLTHFNLAANALQL 212 (549)
T ss_dssp CCEEEEETCS--------------SSCHHHHHHHSCSCCCCCCCCTTTSEEECCEECCCCC-CEEEEEEHHHHHHHHHHH
T ss_pred CcEEEEeCCC--------------CcCHHHHHhcCccccccccCCCCCCEEEEEECCCccCCCceEEEcHHHHHHHHHHH
Confidence 4455555432 2345555554432222333344 899999999999999999999999999998887
Q ss_pred hhhhhhccccCCCCCEEEEeCChhhHHHHHHHHHhhhcCcEEEEeCC-CHHHHHHHHHhhCCeEEEeCcHHHHHHHHHHH
Q 014951 160 DQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG-DVRYLMEDIQELKPTMFSGVPRVYDRIYTGIS 238 (415)
Q Consensus 160 ~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~vv~~~~-~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~ 238 (415)
...+ .+...|++++++|++|.+++...+.++..|+++++.+. ++..+++.|+++++|+++++|+++..+++...
T Consensus 213 ~~~~-----~~~~~d~~~~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~ 287 (549)
T 3g7s_A 213 AVAT-----GLSHMDTIVGCMPMFHSAEFGLVNLMVTVGNEYVVMGMFNQEMLAENIEKYKGTFSWAVPPALNVLVNTLE 287 (549)
T ss_dssp HHHH-----CCCTTCEEECCSCTTSHHHHHHHTTHHHHCCEEEEESSCCHHHHHHHHHHTTCCEEEECHHHHHHHHHHHH
T ss_pred HHHc-----CCCCCCEEEEeCcHHHHHHHHHHHHHHhcCceEEEcCCCCHHHHHHHHHHhCCeEEEeCCHHHHHHHhhhh
Confidence 7666 78899999999999999998888888999999999876 99999999999999999999999999876443
Q ss_pred HhhhcCChhhHHHHHHHHHhhhhccccCCCCCCccchhhHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHHHh----c
Q 014951 239 NKISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVT----S 314 (415)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~~G~~~~~~~~~~~~~~----~ 314 (415)
...... + .+++|.+++||+++++++.+++.+. +
T Consensus 288 ~~~~~~-----------------------------------~--------~~~lr~~~~gg~~l~~~~~~~~~~~~~~~~ 324 (549)
T 3g7s_A 288 SSNKTY-----------------------------------D--------WSYLKVFATGAWPVAPALVEKLLKLAAEKC 324 (549)
T ss_dssp HSCCCC-----------------------------------C--------CTTCCEEEEESSCCCHHHHHHHHHHHHHHS
T ss_pred hhcccC-----------------------------------C--------ccceeEEEeCCccCCHHHHHHHHHHHHhhc
Confidence 211000 0 1389999999999999999999887 5
Q ss_pred C---CceEEeeccCCCCceeeeecCCcccccCcccccccCeEEEEeecCCCCCCCCCCCCCCeEEEecCCccccccCCch
Q 014951 315 G---APLTQGYGLTESCSGCFTSLADVFNMIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPD 391 (415)
Q Consensus 315 ~---~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~G~~~~g~~~~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gY~~~~~ 391 (415)
+ .++++.||+||++.+++..........+++|+|+++++++|+|.+++. +++.|+.|||+|+||+++.|||++|+
T Consensus 325 ~~~~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d~~~g~--~~~~g~~GEl~v~g~~v~~GY~~~~~ 402 (549)
T 3g7s_A 325 NNPRLRHNQIWGMTEACPMVTTNPPLRLDKSTTQGVPMSDIELKVISLEDGR--ELGVGESGEIVIRGPNIFKGYWKREK 402 (549)
T ss_dssp SCTTCEEEEEEECGGGSSEEEECCGGGGGGTTSCCEECTTCEEEEECSSSCC--EECTTCCEEEEEESTTSCSEETTCTT
T ss_pred CCccccccceEeccccchhhhcCCccccCcCCCccccCCCCEEEEEeCCCCc--CCCCCCceEEEEECcchhhhhCCChh
Confidence 6 899999999999988777665554556899999999999999944444 45667999999999999999999999
Q ss_pred hhhhhh---cCC--ceecCceEEEcCCCC
Q 014951 392 LTEEVI---VDG--WFHTGDIGEWQPMEL 415 (415)
Q Consensus 392 ~~~~~~---~~g--~~~TGDlg~~d~~G~ 415 (415)
.|.++| .+| ||+|||+|++|+||+
T Consensus 403 ~t~~~f~~~~~g~~~~~TGDl~~~~~dG~ 431 (549)
T 3g7s_A 403 ENQECWWYDEKGRKFFRTGDVGFIDEEGF 431 (549)
T ss_dssp GGGTSEEECTTCCEEEEEEEEEEECTTSC
T ss_pred hhhhhhhccCCCCceEccCcEEEEcCCce
Confidence 999998 677 999999999999995
No 4
>3ni2_A 4-coumarate:COA ligase; 4CL, phenylpropanoid biosynthesis; HET: AYL EPE; 1.90A {Populus tomentosa} PDB: 3a9v_A* 3a9u_A*
Probab=100.00 E-value=4.4e-57 Score=440.84 Aligned_cols=353 Identities=24% Similarity=0.363 Sum_probs=285.8
Q ss_pred CccCCCCCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEcCCChhhhhhcCccCCCC
Q 014951 1 MRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLY 80 (415)
Q Consensus 1 L~~~Gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~ 80 (415)
|+++|+++||+|+++++|++++++++|||+++|++++|++|.++.+++.+++++++++++|++....+.+....... .
T Consensus 66 L~~~Gv~~gd~V~i~~~~~~~~~~~~la~~~~Gav~vpl~~~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~~~~~~--~ 143 (536)
T 3ni2_A 66 LNKIGIQQGDVIMLFLPSSPEFVLAFLGASHRGAIITAANPFSTPAELAKHAKASRAKLLITQACYYEKVKDFARES--D 143 (536)
T ss_dssp HHHTTCCTTCEEEEECCSSHHHHHHHHHHHHHTCEEEECCTTCCHHHHHHHHHHHTEEEEEECGGGTHHHHHHHHHH--T
T ss_pred HHHcCCCCCCEEEEEcCCcHHHHHHHHHHHHhCCEEeccCCCCCHHHHHHHHHhcCCEEEEEChHHHHHHHHHHhhc--C
Confidence 45789999999999999999999999999999999999999999999999999999999999988766655433211 1
Q ss_pred ccEEEEecCCCchhhHHhhhcCceeecHHHHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEeecHHHHHHhhhhh
Q 014951 81 LKTIVSFANVSSSQKKEAEELGVSCFSWEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVD 160 (415)
Q Consensus 81 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~~~~ 160 (415)
..++.++... .....++++........+.....++|+++|+|||||||.||+|++||+++...+....
T Consensus 144 -~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgv~~th~~l~~~~~~~~ 211 (536)
T 3ni2_A 144 -VKVMCVDSAP-----------DGCLHFSELTQADENEAPQVDISPDDVVALPYSSGTTGLPKGVMLTHKGLITSVAQQV 211 (536)
T ss_dssp -CEEEESSCCC-----------TTCEETHHHHTSCGGGCCCCCCCTTSEEECCEECTTSSSCEEEEEEHHHHHHHHHHHH
T ss_pred -ceEEEecCCC-----------CCccCHHHHhhccccccccCCCCccCEEEEEcCCCccccchHHHhhHHHHHHHHHHHH
Confidence 2344444321 1234556665544333344456789999999999999999999999999998876543
Q ss_pred hhhhhccccCCCCCEEEEeCChhhHHHHHH-HHHhhhcCcEEEEeCC-CHHHHHHHHHhhCCeEEEeCcHHHHHHHHHHH
Q 014951 161 QMFVVTGKVCSEEDTYFSFLPLAHIYDQII-ETHCIHKGCSIGFWRG-DVRYLMEDIQELKPTMFSGVPRVYDRIYTGIS 238 (415)
Q Consensus 161 ~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~-~~~~l~~G~~vv~~~~-~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~ 238 (415)
... .....+...|++++++|++|.+++.. ++.++..|+++++.+. ++..+++.|+++++|++.++|+++..+++..
T Consensus 212 ~~~-~~~~~~~~~d~~l~~~p~~h~~~~~~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~- 289 (536)
T 3ni2_A 212 DGD-NPNLYFHSEDVILCVLPMFHIYALNSIMLCGLRVGAPILIMPKFEIGSLLGLIEKYKVSIAPVVPPVMMSIAKSP- 289 (536)
T ss_dssp CSS-SCSSCCCTTCCEEECSCTTSHHHHHHTHHHHHHHTCCEEECSSCCHHHHHHHHHHHTCCEEEECHHHHHHHHTCS-
T ss_pred hhc-cccccCCCCCEEEEecChHHHHHHHHHHHHHHhcCCEEEEcCCCCHHHHHHHHHHhCCeEEEccHHHHHHHHhCc-
Confidence 211 01125778999999999999999865 7788999999999876 9999999999999999999999999876411
Q ss_pred HhhhcCChhhHHHHHHHHHhhhhccccCCCCCCccchhhHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHHHhc-CCc
Q 014951 239 NKISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTS-GAP 317 (415)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~~G~~~~~~~~~~~~~~~-~~~ 317 (415)
.....++ +++|.+++||+++++++.+++++.+ +.+
T Consensus 290 ------------------------------------~~~~~~l--------~~lr~i~~gGe~l~~~~~~~~~~~~~~~~ 325 (536)
T 3ni2_A 290 ------------------------------------DLDKHDL--------SSLRMIKSGGAPLGKELEDTVRAKFPQAR 325 (536)
T ss_dssp ------------------------------------CGGGSCC--------TTCCEEEEESSCCCHHHHHHHHHHCTTSE
T ss_pred ------------------------------------ccccCCC--------ccceEEEECCCCCCHHHHHHHHHHCCCCC
Confidence 1111111 4899999999999999999999888 889
Q ss_pred eEEeeccCCCCceeeeecC----CcccccCcccccccCeEEEEeecCCCCCCCCCCCCCCeEEEecCCccccccCCchhh
Q 014951 318 LTQGYGLTESCSGCFTSLA----DVFNMIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLT 393 (415)
Q Consensus 318 ~~~~yG~tE~~~~~~~~~~----~~~~~~~~~G~~~~g~~~~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gY~~~~~~~ 393 (415)
+++.||+||++.+++.... ......+++|+|+++++++|+| ++++ .+++.|+.|||+|+||+++.|||++|+.|
T Consensus 326 l~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d-~~~~-~~~~~g~~GEl~v~g~~v~~GY~~~p~~t 403 (536)
T 3ni2_A 326 LGQGYGMTEAGPVLAMCLAFAKEPFDIKPGACGTVVRNAEMKIVD-PETG-ASLPRNQPGEICIRGDQIMKGYLNDPEAT 403 (536)
T ss_dssp EEEEEECGGGSSEEEECGGGSSSCCCCCTTCCCEECSSCEEEEEC-TTTC-CBCCTTCCEEEEEESTTSCSEETTCHHHH
T ss_pred ccccccccccchhhhcccccCCccccCCCCCeeEeCCCcEEEEEe-CCCC-cCCCCCCccEEEEeCcccchhhcCChhHH
Confidence 9999999999977654421 1223458999999999999999 4433 45567799999999999999999999999
Q ss_pred hhhh-cCCceecCceEEEcCCCC
Q 014951 394 EEVI-VDGWFHTGDIGEWQPMEL 415 (415)
Q Consensus 394 ~~~~-~~g~~~TGDlg~~d~~G~ 415 (415)
.+.| .+|||+|||+|++|+||+
T Consensus 404 ~~~~~~~g~~~TGDl~~~~~dG~ 426 (536)
T 3ni2_A 404 SRTIDKEGWLHTGDIGYIDDDDE 426 (536)
T ss_dssp HHHBCTTSCEEEEEEEEECTTSC
T ss_pred HhhccCCCceEcccEEEEcCCce
Confidence 9999 799999999999999995
No 5
>3o83_A Peptide arylation enzyme; ligase, adenylation of 2,3-dihydroxybenzoate and transfer to pantetheine cofactor of BASF; HET: IXN; 1.90A {Acinetobacter baumannii} SCOP: e.23.1.0 PDB: 3o82_A* 3o84_A* 3u16_A* 3u17_A*
Probab=100.00 E-value=3.5e-56 Score=435.07 Aligned_cols=350 Identities=16% Similarity=0.203 Sum_probs=282.6
Q ss_pred CccCCCCCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEcCCChh----hhhhcCcc
Q 014951 1 MRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIP----SILSCLPR 76 (415)
Q Consensus 1 L~~~Gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~----~~~~~~~~ 76 (415)
|+++|+++||+|+++++|++++++++|||+++|++++|+++.++.+++.+++++++++++|++..... ........
T Consensus 72 L~~~Gv~~gd~V~i~~~n~~~~~~~~lA~~~~Gav~vpl~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~ 151 (544)
T 3o83_A 72 LAEKGLGKGDTALVQLPNVAEFYIVFFALLKAGVVVLNALYSHRQYELNAFIKQIQPKLLIGSRQHEVFSNNQFIDSLHD 151 (544)
T ss_dssp HHHTTCCTTCEEEECCCSSHHHHHHHHHHHHHTCEEEECCTTCCHHHHHHHHHHHCCSEEEEETTSGGGSSSHHHHHHHH
T ss_pred HHHCCCCCCCEEEEECCCCHHHHHHHHHHHHhCcEEecCCCCCCHHHHHHHHHhcCeeEEEEccccccccHHHHHHHHhh
Confidence 45789999999999999999999999999999999999999999999999999999999999986541 11111111
Q ss_pred CCCCccEEEEecCCCchhhHHhhhcCceeecHHHHHhcC-CCCCCCCCCCCCCeEEEEecCCCCCCCceEEeecHHHHHH
Q 014951 77 CCLYLKTIVSFANVSSSQKKEAEELGVSCFSWEEFLQLG-TLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAE 155 (415)
Q Consensus 77 ~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~ 155 (415)
.....+.++.++.... ...+.++.... ..........++++++|+|||||||.||+|++||+++...
T Consensus 152 ~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgv~~sh~~~~~~ 219 (544)
T 3o83_A 152 VNLSPEIILMLNHQAT------------DFGLLDWIETPAETFVDFSSTPADEVAFFQLSGGSTGTPKLIPRTHNDYDYS 219 (544)
T ss_dssp TTCCCSEEEEETCCTT------------SEEHHHHHHSCCSSCCCCCCCCTTSEEEEEECCC--CCCCEEEEEHHHHHHH
T ss_pred cccCcceEEEecCCcc------------ccchhhhhhcccccccccccCCccceEEEEECCCcccCCceEEechHHHHHH
Confidence 1234455555543311 12233333332 1122224567899999999999999999999999999999
Q ss_pred hhhhhhhhhhccccCCCCCEEEEeCChhhHHHHHH--HHHhhhcCcEEEEeCC-CHHHHHHHHHhhCCeEEEeCcHHHHH
Q 014951 156 VLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQII--ETHCIHKGCSIGFWRG-DVRYLMEDIQELKPTMFSGVPRVYDR 232 (415)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~--~~~~l~~G~~vv~~~~-~~~~~~~~i~~~~~t~~~~~P~~~~~ 232 (415)
+......+ .+.++|++++++|++|.+++.. ++.++..|+++++.+. ++..+++.|+++++|++.++|+++..
T Consensus 220 ~~~~~~~~-----~~~~~d~~l~~~p~~h~~~~~~~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~ 294 (544)
T 3o83_A 220 VRASAEIC-----GLNSNTRLLCALPAPHNFMLSSPGALGVLHAGGCVVMAPNPEPLNCFSIIQRHQVNMASLVPSAVIM 294 (544)
T ss_dssp HHHHHHHT-----TCCTTCEEEECSCTTSHHHHHSSHHHHHHHTTCEEEECSSCCHHHHHHHHHHHTCCEEEECHHHHHH
T ss_pred HHHHHHHh-----CCCCCCeEEEecCcceEeecchHHHHHHHHcCCEEEECCCCCHHHHHHHHHHHCCCEEEechHHHHH
Confidence 98877766 7889999999999999999874 7788999999999876 99999999999999999999999998
Q ss_pred HHHHHHHhhhcCChhhHHHHHHHHHhhhhccccCCCCCCccchhhHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHHH
Q 014951 233 IYTGISNKISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRV 312 (415)
Q Consensus 233 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~~G~~~~~~~~~~~~~ 312 (415)
+++.... ...++ ++||.+++||+++++++.+++.+
T Consensus 295 l~~~~~~-------------------------------------~~~~~--------~~lr~i~~gG~~l~~~~~~~~~~ 329 (544)
T 3o83_A 295 WLEKAAQ-------------------------------------YKDQI--------QSLKLLQVGGASFPESLARQVPE 329 (544)
T ss_dssp HHHHHTT-------------------------------------THHHH--------TTCCEEEEESSCCCHHHHTHHHH
T ss_pred HHhchhh-------------------------------------ccccC--------CcceEEEEcCCCCCHHHHHHHHH
Confidence 8763211 11111 48999999999999999999999
Q ss_pred hcCCceEEeeccCCCCceeeeecCCcccccCcccccc-cCeEEEEeecCCCCCCCCCCCCCCeEEEecCCccccccCCch
Q 014951 313 TSGAPLTQGYGLTESCSGCFTSLADVFNMIGTVGVPM-TTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPD 391 (415)
Q Consensus 313 ~~~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~G~~~-~g~~~~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gY~~~~~ 391 (415)
.++.++++.||+||++..+...........+++|+|+ ++++++|+| +++.. ++.|+.|||+|+||+++.|||++|+
T Consensus 330 ~~~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~G~p~~~~~~~~i~d-~~~~~--~~~g~~GEl~v~g~~v~~GY~~~~~ 406 (544)
T 3o83_A 330 VLNCKLQQVFGMAEGLVNYTRLDDSDEQIFTTQGRPISSDDEIKIVD-EQYRE--VPEGEIGMLATRGPYTFCGYYQSPE 406 (544)
T ss_dssp HHCSEEEEEEECTTSCEEECCTTSCHHHHHHCCCEESCTTCEEEEEC-TTSCB--CCTTCCEEEEEECTTSCSCCTTCHH
T ss_pred HhCCcEEeeeccccccceeecCCCchhhccCCCceecCCCcEEEEEC-CCCCC--CCCCCeeEEEEecCCcchhhcCChh
Confidence 9999999999999987554433333333457899996 899999999 77754 5567999999999999999999999
Q ss_pred hhhhhh-cCCceecCceEEEcCCCC
Q 014951 392 LTEEVI-VDGWFHTGDIGEWQPMEL 415 (415)
Q Consensus 392 ~~~~~~-~~g~~~TGDlg~~d~~G~ 415 (415)
.|.++| .+|||+|||+|++|+||+
T Consensus 407 ~t~~~f~~~g~~~TGDlg~~~~dG~ 431 (544)
T 3o83_A 407 HNSQVFDEDNYYYSGDLVQRTPDGN 431 (544)
T ss_dssp HHHHHBCTTCCEEEEEEEEECTTSC
T ss_pred hhhhhCCCCCCeEcCCEEEEcCCCC
Confidence 999999 799999999999999995
No 6
>2d1s_A Luciferase, luciferin 4-monooxygenase; alpha/beta, beta barrel, alpha+beta, riken structural genomics/proteomics initiative, RSGI; HET: SLU; 1.30A {Luciola cruciata} PDB: 2d1q_A* 2d1r_A* 2d1t_A*
Probab=100.00 E-value=2.4e-56 Score=436.41 Aligned_cols=354 Identities=24% Similarity=0.382 Sum_probs=281.5
Q ss_pred CccCCCCCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEcCCChhhhhhcCccCCCC
Q 014951 1 MRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLY 80 (415)
Q Consensus 1 L~~~Gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~ 80 (415)
|+++|+++||+|+++++|+++++++++||+++|++++|+++.++.+++.+++++++++++|++.+..+.+....... +.
T Consensus 69 L~~~Gv~~gd~V~i~~~n~~e~~~~~la~~~~Gav~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~-~~ 147 (548)
T 2d1s_A 69 LQNYGLVVDGRIALCSENCEEFFIPVIAGLFIGVGVAPTNEIYTLRELVHSLGISKPTIVFSSKKGLDKVITVQKTV-TT 147 (548)
T ss_dssp HHHHTCCTTCEEEEECSSCTTTHHHHHHHHHHTCEEEEECTTSCHHHHHHHHHHHCCSEEEECTTTHHHHHHHHHHS-TT
T ss_pred HHHcCCCCCCEEEEEeCCchhHHHHHHHHHhhCCEEeccCCCCCHHHHHHHHHhcCCeEEEEcHHHHHHHHHHhcCC-CC
Confidence 35679999999999999999999999999999999999999999999999999999999999998776655432211 22
Q ss_pred ccEEEEecCCCchhhHHhhhcCceeecHHHHHhcCCCC-CCCCCCC-----C-CCeEEEEecCCCCCCCceEEeecHHHH
Q 014951 81 LKTIVSFANVSSSQKKEAEELGVSCFSWEEFLQLGTLD-CELPPKK-----K-TNISTIMYTSGTTGEPKGVVLTNQAIV 153 (415)
Q Consensus 81 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-----~-~~~~~i~~TSGtTG~pK~v~~th~~l~ 153 (415)
...++.++..... .....++++....... .+..... + +++++|+|||||||.||+|++||+++.
T Consensus 148 ~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgv~~sh~~~~ 218 (548)
T 2d1s_A 148 IKTIVILDSKVDY---------RGYQCLDTFIKRNTPPGFQASSFKTVEVDRKEQVALIMNSSGSTGLPKGVQLTHENIV 218 (548)
T ss_dssp CCEEEETTCSSCB---------TTBCBHHHHHHHTSCTTCCGGGCCCCCCCTTTCEEEEECCSSCSSSCCCEEEEHHHHH
T ss_pred CCEEEEeCCcccc---------cccccHHHHHhcCccccCCcccccccccCCCCCEEEEEeCCCCCCCCCEEEecHHHHH
Confidence 3455555432100 0123455555433111 1111112 4 899999999999999999999999999
Q ss_pred HHhhhhhhhhhhccccCCCCCEEEEeCChhhHHHHHH-HHHhhhcCcEEEEeCC-CHHHHHHHHHhhCCeEEEeCcHHHH
Q 014951 154 AEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQII-ETHCIHKGCSIGFWRG-DVRYLMEDIQELKPTMFSGVPRVYD 231 (415)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~-~~~~l~~G~~vv~~~~-~~~~~~~~i~~~~~t~~~~~P~~~~ 231 (415)
..+......+ ....+.++|++++++|++|.+++.. ++.++ .|+++++.+. ++..+++.|+++++|+++++|+++.
T Consensus 219 ~~~~~~~~~~--~~~~~~~~d~~l~~~p~~h~~g~~~~~~~~l-~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~ 295 (548)
T 2d1s_A 219 TRFSHARDPI--YGNQVSPGTAVLTVVPFHHGFGMFTTLGYLI-CGFRVVMLTKFDEETFLKTLQDYKCTSVILVPTLFA 295 (548)
T ss_dssp HHHHHHTCTT--TSCCCCTTCEEEECSCTTSHHHHHHHHHHHH-TTCEEEECCCCCHHHHHHHHHHTTEEEEEECHHHHH
T ss_pred HHHHHhhchh--hccCCCccceEEEeccHHHHHHHHHHHHHHh-cCcEEEEcCCCCHHHHHHHHHHcCCcEEEecHHHHH
Confidence 8887655431 0126678999999999999999876 55667 9999998876 9999999999999999999999999
Q ss_pred HHHHHHHHhhhcCChhhHHHHHHHHHhhhhccccCCCCCCccchhhHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHH
Q 014951 232 RIYTGISNKISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLR 311 (415)
Q Consensus 232 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~~G~~~~~~~~~~~~ 311 (415)
.+.+.. .....++ +++|.+++||+++++++.+++.
T Consensus 296 ~l~~~~-------------------------------------~~~~~~l--------~~lr~i~~gG~~l~~~~~~~~~ 330 (548)
T 2d1s_A 296 ILNKSE-------------------------------------LLNKYDL--------SNLVEIASGGAPLSKEVGEAVA 330 (548)
T ss_dssp HHHHCS-------------------------------------CGGGSCC--------TTCCEEEECSSCCCHHHHHHHH
T ss_pred HHHhCc-------------------------------------ccccccc--------cceeEEEEcCccCCHHHHHHHH
Confidence 886410 0011111 4899999999999999999999
Q ss_pred Hhc-CCceEEeeccCCCCceeeeecCCcccccCcccccccCeEEEEeecCCCCCCCCCCCCCCeEEEecCCccccccCCc
Q 014951 312 VTS-GAPLTQGYGLTESCSGCFTSLADVFNMIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRP 390 (415)
Q Consensus 312 ~~~-~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~G~~~~g~~~~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gY~~~~ 390 (415)
+.+ +.++++.||+||++..++..... ....+++|+|+|+++++|+|.+++ .+++.|+.|||+|+||+++.|||++|
T Consensus 331 ~~~~~~~i~~~YG~TE~~~~~~~~~~~-~~~~~~~G~~~~~~~~~i~d~~~~--~~~~~g~~GEl~v~g~~v~~GY~~~~ 407 (548)
T 2d1s_A 331 RRFNLPGVRQGYGLTETTSAIIITPEG-DDKPGASGKVVPLFKAKVIDLDTK--KSLGPNRRGEVCVKGPMLMKGYVNNP 407 (548)
T ss_dssp HHTTCSCCEEEEECGGGSSEEEECCTT-CCCTTCCBEECTTCEEEEECTTTC--CBCCTTCCEEEEEESTTSCSEETTCH
T ss_pred HHcCCCceeeccccccccceeeecCcc-cCCCCCCCccCCCceEEEEeCCcC--ccCCCCCCeEEEECCHHHhhhhcCCh
Confidence 988 67899999999998877664333 234589999999999999994344 45567799999999999999999999
Q ss_pred hhhhhhh-cCCceecCceEEEcCCCC
Q 014951 391 DLTEEVI-VDGWFHTGDIGEWQPMEL 415 (415)
Q Consensus 391 ~~~~~~~-~~g~~~TGDlg~~d~~G~ 415 (415)
+.|.+.| .+|||+|||+|++|+||+
T Consensus 408 ~~t~~~f~~~g~~~TGDl~~~~~dG~ 433 (548)
T 2d1s_A 408 EATKELIDEEGWLHTGDIGYYDEEKH 433 (548)
T ss_dssp HHHHHHBCTTSCEEEEEEEEECTTCC
T ss_pred HHhhhcccCCcEEEccCEEEEcCCCe
Confidence 9999999 699999999999999995
No 7
>1mdb_A 2,3-dihydroxybenzoate-AMP ligase; adenylation domain, peptide synthetase, antibiotic biosynthesis, siderophore formation; HET: AMP DBH; 2.15A {Bacillus subtilis} SCOP: e.23.1.1 PDB: 1md9_A* 1mdf_A
Probab=100.00 E-value=1.4e-56 Score=437.42 Aligned_cols=346 Identities=18% Similarity=0.195 Sum_probs=275.8
Q ss_pred CccCCCCCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEcCCChh-----hhhhcCc
Q 014951 1 MRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIP-----SILSCLP 75 (415)
Q Consensus 1 L~~~Gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~-----~~~~~~~ 75 (415)
|+++|+++||+|+++++|++++++++|||+++|++++|++|.++.+++.++++.++++++|++.+... .+.....
T Consensus 67 L~~~Gv~~gd~V~i~~~~~~~~~~~~lA~~~~Ga~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~ 146 (539)
T 1mdb_A 67 FQKLGIQQKDRVVVQLPNIKEFFEVIFALFRLGALPVFALPSHRSSEITYFCEFAEAAAYIIPDAYSGFDYRSLARQVQS 146 (539)
T ss_dssp HHHHTCCTTCEEEECCCSSHHHHHHHHHHHHHTCEEEECCTTCCHHHHHHHHHHTTCSEEEEESEETTEEHHHHHHHHHH
T ss_pred HHHcCCCCCCEEEEEcCCcHHHHHHHHHHHHcCeEEecCCCCCCHHHHHHHHHhCCCCEEEeccccccccHHHHHHHHHh
Confidence 35679999999999999999999999999999999999999999999999999999999999875321 1111111
Q ss_pred cCCCCccEEEEecCCCchhhHHhhhcCceeecHHHHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEeecHHHHHH
Q 014951 76 RCCLYLKTIVSFANVSSSQKKEAEELGVSCFSWEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAE 155 (415)
Q Consensus 76 ~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~ 155 (415)
..+..+.++..+... .+.++..............++|+++++|||||||.||||++||+++...
T Consensus 147 -~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~th~~~~~~ 210 (539)
T 1mdb_A 147 -KLPTLKNIIVAGEAE---------------EFLPLEDLHTEPVKLPEVKSSDVAFLQLSGGSTGLSKLIPRTHDDYIYS 210 (539)
T ss_dssp -HCTTCCCEEEESCCT---------------TSEEGGGCCCCCCCCCCCCTTSEEEEEECCCSSSSCCEEEEEHHHHHHH
T ss_pred -cCCCccEEEEcCCcc---------------chhhhhhccccccccCCCCcCceEEEEeCCCcCCCCcEEEEehHHHHHH
Confidence 113334444433211 0111111111111234457899999999999999999999999999998
Q ss_pred hhhhhhhhhhccccCCCCCEEEEeCChhhHHHHHH--HHHhhhcCcEEEEeCC-CHHHHHHHHHhhCCeEEEeCcHHHHH
Q 014951 156 VLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQII--ETHCIHKGCSIGFWRG-DVRYLMEDIQELKPTMFSGVPRVYDR 232 (415)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~--~~~~l~~G~~vv~~~~-~~~~~~~~i~~~~~t~~~~~P~~~~~ 232 (415)
+......+ .+.++|++++.+|++|.+++.. ++.+++.|+++++.+. ++..+++.|+++++|+++++|+++..
T Consensus 211 ~~~~~~~~-----~~~~~d~~l~~~p~~h~~~~~~~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~ 285 (539)
T 1mdb_A 211 LKRSVEVC-----WLDHSTVYLAALPMAHNYPLSSPGVLGVLYAGGRVVLSPSPSPDDAFPLIEREKVTITALVPPLAMV 285 (539)
T ss_dssp HHHHHHHH-----TCCTTCEEEECSCTTSHHHHHSSHHHHHHHTTCEEEECSSSSHHHHHHHHHHHTCSEEEECHHHHHH
T ss_pred HHHHHHhh-----CCCCCCEEEEeecccccchhhHHHHHHHHHhCCEEEECCCCCHHHHHHHHHHcCCeEEEccHHHHHH
Confidence 88776665 6789999999999999999874 7888999999999876 99999999999999999999999999
Q ss_pred HHHHHHHhhhcCChhhHHHHHHHHHhhhhccccCCCCCCccchhhHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHHH
Q 014951 233 IYTGISNKISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRV 312 (415)
Q Consensus 233 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~~G~~~~~~~~~~~~~ 312 (415)
+++....... ..++||.+++||+++++++.+++.+
T Consensus 286 l~~~~~~~~~---------------------------------------------~l~~lr~~~~gG~~l~~~~~~~~~~ 320 (539)
T 1mdb_A 286 WMDAASSRRD---------------------------------------------DLSSLQVLQVGGAKFSAEAARRVKA 320 (539)
T ss_dssp HHHHHHHCCC---------------------------------------------CCTTCCEEEEESSCCCHHHHTTHHH
T ss_pred HHhCccccCC---------------------------------------------CccceeEEEEcCCCCCHHHHHHHHH
Confidence 8763321100 0148999999999999999999999
Q ss_pred hcCCceEEeeccCCCCceeeeecCCcccccCcccccccC-eEEEEeecCCCCCCCCCCCCCCeEEEecCCccccccCCch
Q 014951 313 TSGAPLTQGYGLTESCSGCFTSLADVFNMIGTVGVPMTT-VEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPD 391 (415)
Q Consensus 313 ~~~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~G~~~~g-~~~~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gY~~~~~ 391 (415)
.+++++++.||+||++..+...........+++|+|+++ .+++|+| +++. +++.|+.|||+|+||+++.|||++|+
T Consensus 321 ~~~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~G~p~~~~~~~~i~d-~~~~--~~~~g~~GEl~v~g~~v~~GY~~~~~ 397 (539)
T 1mdb_A 321 VFGCTLQQVFGMAEGLVNYTRLDDPEEIIVNTQGKPMSPYDESRVWD-DHDR--DVKPGETGHLLTRGPYTIRGYYKAEE 397 (539)
T ss_dssp HTCSEEEEEEECTTSCEEECCTTSCHHHHHHCCCEESSTTCEEEEEC-TTSC--BCCTTCCEEEEEECTTSCSSCTTCHH
T ss_pred HhCCcEEEEEcCCCCcccccCCCCcHHhcCCCCCcccCCCceEEEEC-CCCC--CCcCCCcceEEeeCcccchhhcCChh
Confidence 899999999999996543322111112234789999976 5899999 7765 45567999999999999999999999
Q ss_pred hhhhhh-cCCceecCceEEEcCCCC
Q 014951 392 LTEEVI-VDGWFHTGDIGEWQPMEL 415 (415)
Q Consensus 392 ~~~~~~-~~g~~~TGDlg~~d~~G~ 415 (415)
.|.++| .+|||+|||+|++|+||+
T Consensus 398 ~t~~~f~~~g~~~TGDlg~~~~dG~ 422 (539)
T 1mdb_A 398 HNAASFTEDGFYRTGDIVRLTRDGY 422 (539)
T ss_dssp HHHHHBCTTSCEEEEEEEEECTTSC
T ss_pred hhhhhccCCCCeecCceEEECCCCc
Confidence 999999 699999999999999995
No 8
>3r44_A Fatty acyl COA synthetase FADD13 (fatty-acyl-COA synthetase); ligase; HET: HIS; 1.80A {Mycobacterium tuberculosis} PDB: 3t5c_A 3t5b_A
Probab=100.00 E-value=2.6e-56 Score=433.34 Aligned_cols=344 Identities=23% Similarity=0.326 Sum_probs=278.4
Q ss_pred CccCCCCCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEcCCChhhhhhcCccCCCC
Q 014951 1 MRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLY 80 (415)
Q Consensus 1 L~~~Gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~ 80 (415)
|+++|+++||+|+++++|++++++++|||+++|++++||++.++.+++.+++++++++++|++....+.+....... ..
T Consensus 60 L~~~Gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~-~~ 138 (517)
T 3r44_A 60 LTALGIAKGDRVALLMPNSVEFCCLFYGAAKLGAVAVPINTRLAAPEVSFILSDSGSKVVIYGAPSAPVIDAIRAQA-DP 138 (517)
T ss_dssp HHHTTCCTTCEEEEECCSSHHHHHHHHHHHHHTCEEEECCTTSCHHHHHHHHHHHTCSEEEECGGGHHHHHHHHHSS-SC
T ss_pred HHHcCCCCcCEEEEEcCCCHHHHHHHHHHHHhCcEEEecCcccCHHHHHHHHHhcCceEEEECCchHHHHHHHHhcc-CC
Confidence 45789999999999999999999999999999999999999999999999999999999999987766554332211 11
Q ss_pred ccEEEEecCCCchhhHHhhhcCceeecHHHHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEeecHHHHHHhhhhh
Q 014951 81 LKTIVSFANVSSSQKKEAEELGVSCFSWEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVD 160 (415)
Q Consensus 81 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~~~~ 160 (415)
...++.+.. ...+.+.........+.....++|+++|+|||||||.||+|++||+++...+....
T Consensus 139 ~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~ 203 (517)
T 3r44_A 139 PGTVTDWIG---------------ADSLAERLRSAAADEPAVECGGDDNLFIMYTSGTTGHPKGVVHTHESVHSAASSWA 203 (517)
T ss_dssp CTTCCEEEE---------------HHHHHHHHHHCCCCCCCCCCCTTSEEEEEEECC---CCEEEEEEHHHHHHHHHHHH
T ss_pred ccEEEEccC---------------cccHHHHhhccCcCCCCCCCCCCCeEEEEECCcccccCceeeeeHHHHHHHHHHHH
Confidence 111111110 11233444333333344556789999999999999999999999999999998877
Q ss_pred hhhhhccccCCCCCEEEEeCChhhHHHHHHHHHhhhcCcEEEEeCC-CHHHHHHHHHhhCCeEEEeCcHHHHHHHHHHHH
Q 014951 161 QMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG-DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISN 239 (415)
Q Consensus 161 ~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~vv~~~~-~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~ 239 (415)
..+ .+..+|++++++|++|.+++...+.+++.|+++++.+. ++..+++.|+++++|++.++|+++..+.+....
T Consensus 204 ~~~-----~~~~~d~~l~~~p~~~~~~~~~~~~~~~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~ 278 (517)
T 3r44_A 204 STI-----DVRYRDRLLLPLPMFHVAALTTVIFSAMRGVTLISMPQFDATKVWSLIVEERVCIGGAVPAILNFMRQVPEF 278 (517)
T ss_dssp HHS-----CCCTTCEEEECSCTTSHHHHHHHHHHHHHTCEEEECSSCCHHHHHHHHHHTTCCEEEECHHHHHHHHHSHHH
T ss_pred Hhc-----CCCCCCEEEEeCchHHHHHHHHHHHHHhcCeEEEEeCCCCHHHHHHHHHHhCCeEEEeHHHHHHHHHhCccc
Confidence 666 78899999999999999999875555559999998876 999999999999999999999999988652111
Q ss_pred hhhcCChhhHHHHHHHHHhhhhccccCCCCCCccchhhHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHHHhcCCceE
Q 014951 240 KISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLT 319 (415)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~~G~~~~~~~~~~~~~~~~~~~~ 319 (415)
. ....+++|.+++||+++++++.+++.+. +.+++
T Consensus 279 -------------------------------------~--------~~~~~~lr~i~~gGe~l~~~~~~~~~~~-~~~~~ 312 (517)
T 3r44_A 279 -------------------------------------A--------ELDAPDFRYFITGGAPMPEALIKIYAAK-NIEVV 312 (517)
T ss_dssp -------------------------------------H--------HCCCTTCCEEEECSSCCCHHHHHHHHHT-TCEEE
T ss_pred -------------------------------------c--------cCCCCcccEEEECCCCCCHHHHHHHHhc-CCcEE
Confidence 0 1112489999999999999999999886 99999
Q ss_pred EeeccCCCCceeeeecCCc-ccccCcccccccCeEEEEeecCCCCCCCCCCCCCCeEEEecCCccccccCCchhhhhhhc
Q 014951 320 QGYGLTESCSGCFTSLADV-FNMIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVIV 398 (415)
Q Consensus 320 ~~yG~tE~~~~~~~~~~~~-~~~~~~~G~~~~g~~~~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gY~~~~~~~~~~~~ 398 (415)
+.||+||+++.++...... ....+++|+|.++++++|+| +++...+ .| .|||+|+||+++.|||++|+.|.++|.
T Consensus 313 ~~YG~TE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d-~~~~~~~--~g-~GEl~v~g~~v~~GY~~~p~~t~~~f~ 388 (517)
T 3r44_A 313 QGYALTESCGGGTLLLSEDALRKAGSAGRATMFTDVAVRG-DDGVIRE--HG-EGEVVIKSDILLKEYWNRPEATRDAFD 388 (517)
T ss_dssp EEEECGGGTTCEEEECGGGTTTTTTCCBEECTTEEEEEEC-TTSCEES--SE-EEEEEEEETTSCSEETTCHHHHHHTEE
T ss_pred EeecccccccceeecCCccccccCCCCCcCCCCeEEEEEC-CCCCCCC--CC-CeEEEEeCcchhhhhCCChhhhHhhhc
Confidence 9999999988766554333 34458999999999999999 7665444 34 799999999999999999999999999
Q ss_pred CCceecCceEEEcCCCC
Q 014951 399 DGWFHTGDIGEWQPMEL 415 (415)
Q Consensus 399 ~g~~~TGDlg~~d~~G~ 415 (415)
+|||+|||+|++|+||+
T Consensus 389 ~g~~~TGDl~~~~~dG~ 405 (517)
T 3r44_A 389 NGWFRTGDIGEIDDEGY 405 (517)
T ss_dssp TTEEEEEEEEEECTTSC
T ss_pred CCCEecceeEEEcCCee
Confidence 99999999999999995
No 9
>4fuq_A Malonyl COA synthetase; ANL superfamily, methylma malonate, ligase; HET: MSE; 1.70A {Rhodopseudomonas palustris} PDB: 4fut_A* 4gxr_A* 4gxq_A*
Probab=100.00 E-value=1.4e-56 Score=433.78 Aligned_cols=344 Identities=23% Similarity=0.366 Sum_probs=275.5
Q ss_pred CccCCCCCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEcCCChhhhhhcCccCCCC
Q 014951 1 MRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLY 80 (415)
Q Consensus 1 L~~~Gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~ 80 (415)
|+++|+++||+|+++++|++++++++|||+++|++++|+++.++.+++.+++++++++++|++.+..+.+....... .
T Consensus 45 L~~~Gv~~gd~V~i~~~~~~~~~~~~lA~~~~Ga~~vpl~~~~~~~~l~~il~~~~~~~vi~~~~~~~~~~~~~~~~-~- 122 (503)
T 4fuq_A 45 LVARGLQVGDRVAAQTEKSVEALVLYLATVRAGGVYLPLNTAYTLHELDYFITDAEPKIVVCDPSKRDGIAAIAAKV-G- 122 (503)
T ss_dssp HHHTTCCTTCEEEEECCSCHHHHHHHHHHHHTTCEEEECCTTCCHHHHHHHHHHHCCSEEEECGGGTTTTHHHHHHH-T-
T ss_pred HHHcCCCCCCEEEEECCCCHHHHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHhcCCcEEEECchhhHHHHHHHhhc-C-
Confidence 45789999999999999999999999999999999999999999999999999999999999987655443322211 0
Q ss_pred ccEEEEecCCCchhhHHhhhcCceeecHHHHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEeecHHHHHHhhhhh
Q 014951 81 LKTIVSFANVSSSQKKEAEELGVSCFSWEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVD 160 (415)
Q Consensus 81 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~~~~ 160 (415)
..+..++.... ..+.+...............++|+++|+|||||||.||+|++||+++...+....
T Consensus 123 -~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~ 188 (503)
T 4fuq_A 123 -ATVETLGPDGR-------------GSLTDAAAGASEAFATIDRGADDLAAILYTSGTTGRSKGAMLSHDNLASNSLTLV 188 (503)
T ss_dssp -CEEEECCTTSC-------------SHHHHHHHTSCSCCCCCCCCTTSEEEEEECC--CCSCCEEEEEHHHHHHHHHHHH
T ss_pred -ceEEEecCCcc-------------cccchhhhcCCCCcCcCCCCCCCeEEEEECCCcccCCeEEEEeHHHHHHHHHHHH
Confidence 13333332211 1111222222222233456789999999999999999999999999999988877
Q ss_pred hhhhhccccCCCCCEEEEeCChhhHHHHHH-HHHhhhcCcEEEEeCC-CHHHHHHHHHhhCCeEEEeCcHHHHHHHHHHH
Q 014951 161 QMFVVTGKVCSEEDTYFSFLPLAHIYDQII-ETHCIHKGCSIGFWRG-DVRYLMEDIQELKPTMFSGVPRVYDRIYTGIS 238 (415)
Q Consensus 161 ~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~-~~~~l~~G~~vv~~~~-~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~ 238 (415)
..+ .+.++|++++.+|++|.+++.. .+.+++.|+++++.+. ++..+++.++ ++|+++++|+++..+++...
T Consensus 189 ~~~-----~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~i~--~~t~~~~~P~~~~~l~~~~~ 261 (503)
T 4fuq_A 189 DYW-----RFTPDDVLIHALPIYHTHGLFVASNVTLFARGSMIFLPKFDPDKILDLMA--RATVLMGVPTFYTRLLQSPR 261 (503)
T ss_dssp HHT-----TCCTTCEEEECSCSSSHCCCCCCHHHHHHTTCEEEECSSCCHHHHHHHHT--TCCEEEECHHHHHHHHTCTT
T ss_pred HHh-----CCCCCCEEEEeCChHHHHHHHHHHHHHHHhCCEEEEcCCCCHHHHHHHHh--hcCEEEEHHHHHHHHHhCCC
Confidence 666 7889999999999999998764 6778899999998876 9999999998 89999999999998864110
Q ss_pred HhhhcCChhhHHHHHHHHHhhhhccccCCCCCCccchhhHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHHHhcCCce
Q 014951 239 NKISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPL 318 (415)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~~G~~~~~~~~~~~~~~~~~~~ 318 (415)
....+ .+++|.+++||+++++++.+.+.+.++.++
T Consensus 262 -------------------------------------~~~~~--------~~~lr~~~~gg~~l~~~~~~~~~~~~~~~~ 296 (503)
T 4fuq_A 262 -------------------------------------LTKET--------TGHMRLFISGSAPLLADTHREWSAKTGHAV 296 (503)
T ss_dssp -------------------------------------CSTTT--------TTTCCEEEECSSCCCHHHHHHHHHHHSCCE
T ss_pred -------------------------------------ccccc--------hhhcEEEEECCCCCCHHHHHHHHHHhCCCc
Confidence 00000 148999999999999999999999999999
Q ss_pred EEeeccCCCCceeeeecCCcccccCcccccccCeEEEEeecCCCCCCCCCCCCCCeEEEecCCccccccCCchhhhhhh-
Q 014951 319 TQGYGLTESCSGCFTSLADVFNMIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVI- 397 (415)
Q Consensus 319 ~~~yG~tE~~~~~~~~~~~~~~~~~~~G~~~~g~~~~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gY~~~~~~~~~~~- 397 (415)
++.||+||++..+.... +.....+++|+|+++++++|+|.+++ .+++.|+.|||+|+||+++.|||++|+.|.++|
T Consensus 297 ~~~YG~TE~~~~~~~~~-~~~~~~~~~G~p~~~~~~~i~d~~~g--~~~~~g~~GEl~v~g~~v~~GY~~~~~~t~~~f~ 373 (503)
T 4fuq_A 297 LERYGMTETNMNTSNPY-DGDRVPGAVGPALPGVSARVTDPETG--KELPRGDIGMIEVKGPNVFKGYWRMPEKTKSEFR 373 (503)
T ss_dssp EECCEETTTEECBCCCS-SSCCCTTEEEEBCTTCEEEEECTTTC--CBCCTTCCEEEEEESTTSCCCBTTCHHHHHHTBC
T ss_pred cceEcccccCcccccCC-CCCCcCCccccCCCCeEEEEEECCCC--CCCcCCCceEEEEECCchhhhhcCChhhhHhhhC
Confidence 99999999987654332 33334589999999999999994344 455677999999999999999999999999999
Q ss_pred cCCceecCceEEEcCCCC
Q 014951 398 VDGWFHTGDIGEWQPMEL 415 (415)
Q Consensus 398 ~~g~~~TGDlg~~d~~G~ 415 (415)
.+|||+|||+|++|+||+
T Consensus 374 ~~g~~~TGDl~~~~~dG~ 391 (503)
T 4fuq_A 374 DDGFFITGDLGKIDERGY 391 (503)
T ss_dssp TTSCEEEEEEEEECTTCE
T ss_pred CCCCeEcceeEEEcCCCc
Confidence 599999999999999984
No 10
>3etc_A AMP-binding protein; adenylate-forming acyl-COA synthetase ligase, ligase; HET: PGE 1PE EPE; 2.10A {Methanosarcina acetivorans}
Probab=100.00 E-value=8e-56 Score=434.74 Aligned_cols=349 Identities=18% Similarity=0.188 Sum_probs=283.0
Q ss_pred CccCCCCCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEcCCCh--hhhhhcCccCC
Q 014951 1 MRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKI--PSILSCLPRCC 78 (415)
Q Consensus 1 L~~~Gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~--~~~~~~~~~~~ 78 (415)
|+++|+++||+|+|+++|++++++++|||+++|++++|+++.++.+++.+++++++++++|++.+.. ..+.......
T Consensus 103 L~~~Gv~~Gd~V~l~~~~~~e~~~~~lA~~~~Gav~vpl~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~- 181 (580)
T 3etc_A 103 FVKHGIGKGDYVMLTLKSRYDFWYCMLGLHKLGAIAVPATHMLKTRDIVYRIEKAGLKMIVCIAEDDVPEQVDEAHAEC- 181 (580)
T ss_dssp HHHTTCCTTCEEEEECTTCTHHHHHHHHHHHHTCEEEECCTTCCHHHHHHHHHHHTCCEEEEESSTTHHHHHHHHHHHH-
T ss_pred HHHcCCCCCCEEEEEcCCCHHHHHHHHHHHhCCEEEEeCCccCCHHHHHHHHHhcCCCEEEEecchhHHHHHHHHhhhC-
Confidence 4678999999999999999999999999999999999999999999999999999999999988764 4443332221
Q ss_pred CCc-cEEEEecCCCchhhHHhhhcCceeecHHHHHhcCCCCCCC----CCCCCCCeEEEEecCCCCCCCceEEeecHHHH
Q 014951 79 LYL-KTIVSFANVSSSQKKEAEELGVSCFSWEEFLQLGTLDCEL----PPKKKTNISTIMYTSGTTGEPKGVVLTNQAIV 153 (415)
Q Consensus 79 ~~~-~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~i~~TSGtTG~pK~v~~th~~l~ 153 (415)
+.. ..++.++... ...+.++.+........... ....++|+++|+|||||||.||+|.++|.+++
T Consensus 182 ~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~~~~~~~ 251 (580)
T 3etc_A 182 GDIPLKKAKVGGDV----------LEGWIDFRKELEESSPIFERPTGEVSTKNEDICLVYFSSGTAGFPKMVEHDNTYPL 251 (580)
T ss_dssp CSCCCEEEEESSSC----------CTTCEEHHHHHHHSCSCCCCCCGGGSCCTTSEEEEEEECCSSSSCEEEEEETTHHH
T ss_pred CCcceEEEEeCCcc----------ccccccHHHHHhhCCcccccCccccCCCCCCcEEEEEeCCCCCCccEEEeccHHHH
Confidence 222 3455554321 11245566665443222111 24678999999999999999999999999988
Q ss_pred HHhhhhhhhhhhccccCCCCCEEEEeCChhhHHHHHH-HHHhhhcCcEEEEeC---CCHHHHHHHHHhhCCeEEEeCcHH
Q 014951 154 AEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQII-ETHCIHKGCSIGFWR---GDVRYLMEDIQELKPTMFSGVPRV 229 (415)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~-~~~~l~~G~~vv~~~---~~~~~~~~~i~~~~~t~~~~~P~~ 229 (415)
..+......+ .+...+++++..|++|..+.+. ++.++..|+++++.+ .++..+++.|+++++|+++++|++
T Consensus 252 ~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~ 326 (580)
T 3etc_A 252 GHILTAKYWQ-----NVEDDGLHYTVADSGWGKCVWGKLYGQWIAGCAVFVYDYDRFEAKNMLEKASKYGVTTFCAPPTI 326 (580)
T ss_dssp HHHHHHHTTS-----CCCTTCEEEECCCTTSTHHHHHTTHHHHHTTCEEEEEECSSCCHHHHHHHHHHHTCCEEEECHHH
T ss_pred HHHHHHHHhh-----CCCCCceEEEeCChHHHHHHHHHHHHHHhCCcEEEEecCCCCCHHHHHHHHHHHCCeEEEccHHH
Confidence 8776543333 6788999999999999988875 677899999998874 399999999999999999999999
Q ss_pred HHHHHHHHHHhhhcCChhhHHHHHHHHHhhhhccccCCCCCCccchhhHHHHHHHHHHhCCceeEEEEecCCCCHHHHHH
Q 014951 230 YDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEF 309 (415)
Q Consensus 230 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~~G~~~~~~~~~~ 309 (415)
++.+.+. .....+ .++||.+++||+++++++.++
T Consensus 327 ~~~l~~~--------------------------------------~~~~~~--------l~~lr~i~~gGe~l~~~~~~~ 360 (580)
T 3etc_A 327 YRFLIKE--------------------------------------DLSHYN--------FSTLKYAVVAGEPLNPEVFNR 360 (580)
T ss_dssp HHHHHTS--------------------------------------CC---C--------CTTCCEEEECSSCCCHHHHHH
T ss_pred HHHHHhc--------------------------------------ccccCC--------CccceEEEEccCCCCHHHHHH
Confidence 9887541 001111 148999999999999999999
Q ss_pred HHHhcCCceEEeeccCCCCceeeeecCCcccccCcccccccCeEEEEeecCCCCCCCCCCCCCCeEEEec-----CCccc
Q 014951 310 LRVTSGAPLTQGYGLTESCSGCFTSLADVFNMIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRG-----NTLFS 384 (415)
Q Consensus 310 ~~~~~~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~G~~~~g~~~~i~~~~~~~~~~~~~~~~Gel~v~~-----~~~~~ 384 (415)
+.+.+++++++.||+||++..++..... ....+++|+|+||++++|+| +++. +++.|+.|||+|+| ++++.
T Consensus 361 ~~~~~g~~i~~~YG~TE~~~~~~~~~~~-~~~~~~~G~p~~~~~v~ivd-~~g~--~~~~g~~GEl~v~~~~g~~~~~~~ 436 (580)
T 3etc_A 361 FLEFTGIKLMEGFGQTETVVTIATFPWM-EPKPGSIGKPTPGYKIELMD-RDGR--LCEVGEEGEIVINTMEGKPVGLFV 436 (580)
T ss_dssp HHHHHSCCCEEEECCTTSSCCEECCTTS-CCCTTCCBEECTTCEEEEEC-TTSC--BCCTTCCEEEEEECTTCCCTTCCC
T ss_pred HHHHhCCeEecccccccccceeecCCCC-CCCCCccccCCCCCEEEEEC-CCCC--CCCCCCceEEEEecCCCCCCeeec
Confidence 9998999999999999998766554433 33458999999999999999 7765 45567999999997 78999
Q ss_pred cccCCchhhhhhhcCCceecCceEEEcCCCC
Q 014951 385 GYYKRPDLTEEVIVDGWFHTGDIGEWQPMEL 415 (415)
Q Consensus 385 gY~~~~~~~~~~~~~g~~~TGDlg~~d~~G~ 415 (415)
|||++|+.|.+.|.+|||+|||+|++|+||+
T Consensus 437 gY~~~p~~t~~~f~~gwy~TGDlg~~d~dG~ 467 (580)
T 3etc_A 437 HYGKDPERTEETWHDGYYHTGDMAWMDEDGY 467 (580)
T ss_dssp EETTCHHHHHHHEETTEEEEEEEEEECTTSC
T ss_pred cccCCHhHHHhhcCCCEEecCcEEEECCCCc
Confidence 9999999999999999999999999999996
No 11
>3c5e_A Acyl-coenzyme A synthetase ACSM2A, mitochondrial; middle-chain acyl-COA synthetase, xenobiotic/medium-chain FA COA ligase; HET: ATP; 1.60A {Homo sapiens} PDB: 2vze_A 3b7w_A* 3day_A* 3eq6_A* 3eyn_A* 3gpc_A* 2wd9_A*
Probab=100.00 E-value=5.3e-55 Score=428.36 Aligned_cols=347 Identities=18% Similarity=0.253 Sum_probs=282.8
Q ss_pred CccC-CCCCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEcCCChhhhhhcCccCCC
Q 014951 1 MRSR-GVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCL 79 (415)
Q Consensus 1 L~~~-Gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~ 79 (415)
|++. |+++||+|+|+++|++++++++|||+++|++++|+++.++.+++.+++++++++++|++.+..+.+...... .+
T Consensus 90 L~~~~Gv~~gd~V~i~~~n~~e~~~~~lA~~~~Ga~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~-~~ 168 (570)
T 3c5e_A 90 LSGACGLQRGDRVAVVLPRVPEWWLVILGCIRAGLIFMPGTIQMKSTDILYRLQMSKAKAIVAGDEVIQEVDTVASE-CP 168 (570)
T ss_dssp HHTTTCCCTTCEEEEECCSCHHHHHHHHHHHHHTCEEEECCTTCCHHHHHHHHHHHTCSEEEEETTTHHHHHHHGGG-CT
T ss_pred HHHccCCCCCCEEEEEcCCCHHHHHHHHHHHHcCeEEEecCCCCCHHHHHHHHHhcCCeEEEechHHHHHHHHHhhc-CC
Confidence 3456 999999999999999999999999999999999999999999999999999999999999887766544332 24
Q ss_pred CccEEEEecCCCchhhHHhhhcCceeecHHHHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEeecHHHHH--Hhh
Q 014951 80 YLKTIVSFANVSSSQKKEAEELGVSCFSWEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVA--EVL 157 (415)
Q Consensus 80 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~th~~l~~--~~~ 157 (415)
.++.++.++.... .....++++..............++++++|+|||||||.||+|+++|+ ++. ...
T Consensus 169 ~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~-~~~~~~~~ 237 (570)
T 3c5e_A 169 SLRIKLLVSEKSC----------DGWLNFKKLLNEASTTHHCVETGSQEASAIYFTSGTSGLPKMAEHSYS-SLGLKAKM 237 (570)
T ss_dssp TCCEEEEESSSCC----------TTSEEHHHHHHHSCSCCCCCCCBTTSEEEEEECCCSSSSCCEEEEEHH-HHHHHHHH
T ss_pred ceeEEEEecccCc----------cccccHHHHhhcccccccccCCCCCCcEEEEECCCCCCCCCEEEechH-HHHhhhhh
Confidence 4556666654211 013345665544322223345678999999999999999999999999 544 333
Q ss_pred hhhhhhhhccccCCCCCEEEEeCChhhHHHHHH-HHHhhhcCcEEEEeC---CCHHHHHHHHHhhCCeEEEeCcHHHHHH
Q 014951 158 SVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQII-ETHCIHKGCSIGFWR---GDVRYLMEDIQELKPTMFSGVPRVYDRI 233 (415)
Q Consensus 158 ~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~-~~~~l~~G~~vv~~~---~~~~~~~~~i~~~~~t~~~~~P~~~~~l 233 (415)
.. ..+ .+..+|++++.+|++|.+++.. ++.+++.|+++++.+ .++..+++.|+++++|+++++|++++.+
T Consensus 238 ~~-~~~-----~~~~~d~~~~~~p~~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l 311 (570)
T 3c5e_A 238 DA-GWT-----GLQASDIMWTISDTGWILNILCSLMEPWALGACTFVHLLPKFDPLVILKTLSSYPIKSMMGAPIVYRML 311 (570)
T ss_dssp HT-TTT-----SCCTTCEEEECCCTTSHHHHHHTTHHHHHHTCEEEEECCSSCCHHHHHHHHHHSCCCEEEECHHHHHHH
T ss_pred hh-hhc-----CCCCCceEEEcCchHHHHHHHHHHHHHHHhCceEEEecCCCCCHHHHHHHHHHhCCeEEeccHHHHHHH
Confidence 32 333 6788999999999999999874 778899999999885 3999999999999999999999999988
Q ss_pred HHHHHHhhhcCChhhHHHHHHHHHhhhhccccCCCCCCccchhhHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHHHh
Q 014951 234 YTGISNKISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVT 313 (415)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~~G~~~~~~~~~~~~~~ 313 (415)
++. . .... ..+++|.+++||+++++++.+++.+.
T Consensus 312 ~~~---~-----------------------------------~~~~--------~~~~lr~i~~gGe~l~~~~~~~~~~~ 345 (570)
T 3c5e_A 312 LQQ---D-----------------------------------LSSY--------KFPHLQNCVTVGESLLPETLENWRAQ 345 (570)
T ss_dssp HTS---C-----------------------------------TTTC--------CCTTCCEEEEESSCCCHHHHHHHHHH
T ss_pred Hhc---c-----------------------------------cccc--------ccccceEEEEcCCcCCHHHHHHHHHH
Confidence 641 0 0000 01489999999999999999999988
Q ss_pred cCCceEEeeccCCCCceeeeecCCcccccCcccccccCeEEEEeecCCCCCCCCCCCCCCeEEEe-----cCCccccccC
Q 014951 314 SGAPLTQGYGLTESCSGCFTSLADVFNMIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLR-----GNTLFSGYYK 388 (415)
Q Consensus 314 ~~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~G~~~~g~~~~i~~~~~~~~~~~~~~~~Gel~v~-----~~~~~~gY~~ 388 (415)
+++++++.||+||++..++..... ....+++|+|+++++++|+| +++. +++.|+.|||+|+ |++++.|||+
T Consensus 346 ~g~~i~~~YG~TE~~~~~~~~~~~-~~~~~~vG~p~~~~~v~i~d-~~g~--~~~~G~~GEl~v~~~~~~g~~v~~GY~~ 421 (570)
T 3c5e_A 346 TGLDIRESYGQTETGLTCMVSKTM-KIKPGYMGTAASCYDVQIID-DKGN--VLPPGTEGDIGIRVKPIRPIGIFSGYVD 421 (570)
T ss_dssp HSCCCEEEEEETTTEEEEECCTTS-CCCTTCCCEECTTCCEEEEC-TTSC--BCCTTCCEEEEEECSSBCCTTCCCEETT
T ss_pred hCCchhhccchhhcccceecCccc-ccCCCcccccCCCceEEEEC-CCCC--CCCCCCCCeeEEeccCCCCchhhccccC
Confidence 899999999999998766554332 23458999999999999999 7765 4556799999999 9999999999
Q ss_pred CchhhhhhhcCCceecCceEEEcCCCC
Q 014951 389 RPDLTEEVIVDGWFHTGDIGEWQPMEL 415 (415)
Q Consensus 389 ~~~~~~~~~~~g~~~TGDlg~~d~~G~ 415 (415)
+|+.|.+.|.+|||+|||+|++|+||+
T Consensus 422 ~~~~t~~~f~~~~~~TGDlg~~d~dG~ 448 (570)
T 3c5e_A 422 NPDKTAANIRGDFWLLGDRGIKDEDGY 448 (570)
T ss_dssp CHHHHHHTEETTEEEEEEEEEECTTSC
T ss_pred ChhHhhhhhcCCccccceeEEEcCCce
Confidence 999999999999999999999999995
No 12
>1t5h_X 4-chlorobenzoyl COA ligase; adenylate-forming coenzyme A ligase domain alternation confo change; 2.00A {Alcaligenes SP} SCOP: e.23.1.1 PDB: 1t5d_X 3cw9_A* 3cw8_X* 2qvz_X* 2qw0_X* 3dlp_X* 2qvx_X* 2qvy_X*
Probab=100.00 E-value=3.3e-55 Score=424.69 Aligned_cols=336 Identities=21% Similarity=0.282 Sum_probs=267.5
Q ss_pred CccCCCCCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEE--cCCChhhhhhcCccCC
Q 014951 1 MRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFV--QENKIPSILSCLPRCC 78 (415)
Q Consensus 1 L~~~Gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~ii~--~~~~~~~~~~~~~~~~ 78 (415)
|+++|+++||+|+++++|++++++++|||+++|++++|+++.++.+++.+++++++++++|+ +.+..+.+.....
T Consensus 46 L~~~Gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~~~~~~--- 122 (504)
T 1t5h_X 46 LHADGLRPQQRVAVVAPNSADVVIAILALHRLGAVPALLNPRLKSAELAELIKRGEMTAAVIAVGRQVADAIFQSGS--- 122 (504)
T ss_dssp HHHTTCCTTCEEEEECCSCHHHHHHHHHHHHHTCEEEEECTTSCHHHHHHHHHHTTCSEEEECC--CHHHHHHHHCC---
T ss_pred HHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHhCcEEEecCCccChHHHHHHHhhcCCcEEEEecchhhhhhhhhccc---
Confidence 45689999999999999999999999999999999999999999999999999999999999 6665444312111
Q ss_pred CCccEEEEecCCCchhhHHhhhcCceeecHHHHHhcC-----CCCCCCCCCCCCCeEEEEecCCCCCCCceEEeecHHHH
Q 014951 79 LYLKTIVSFANVSSSQKKEAEELGVSCFSWEEFLQLG-----TLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIV 153 (415)
Q Consensus 79 ~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~th~~l~ 153 (415)
..+ ++.+ +++.... ..........++++++|+|||||||.||+|++||+++.
T Consensus 123 -~~~-~~~~---------------------~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~sh~~~~ 179 (504)
T 1t5h_X 123 -GAR-IIFL---------------------GDLVRDGEPYSYGPPIEDPQREPAQPAFIFYTSGTTGLPKAAIIPQRAAE 179 (504)
T ss_dssp -CCE-EEEG---------------------GGTEETTEECCCSCCCCCCCCCTTSEEEEEECCC---CCCEEEEEGGGHH
T ss_pred -cce-eEEe---------------------cchhhcCcccccCCccCCCCCCCCCeEEEEeCCCCCCCCCEEEecHHHHH
Confidence 111 2222 1111110 11111234567999999999999999999999999999
Q ss_pred HHhhhhhhhhhhccccC--CCCCEEEEeCChhhHHHHH-HHHHhhhcCcEEEEeCC-CHHHHHHHHHhhCCeEEEeCcHH
Q 014951 154 AEVLSVDQMFVVTGKVC--SEEDTYFSFLPLAHIYDQI-IETHCIHKGCSIGFWRG-DVRYLMEDIQELKPTMFSGVPRV 229 (415)
Q Consensus 154 ~~~~~~~~~~~~~~~~~--~~~d~~l~~~p~~~~~~~~-~~~~~l~~G~~vv~~~~-~~~~~~~~i~~~~~t~~~~~P~~ 229 (415)
..+......+ .+ .+.|++++.+|++|.+++. .++.+++.|+++++.+. ++..+++.|+++++|+++++|++
T Consensus 180 ~~~~~~~~~~-----~~~~~~~~~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~ 254 (504)
T 1t5h_X 180 SRVLFMSTQV-----GLRHGRHNVVLGLMPLYHVVGFFAVLVAALALDGTYVVVEEFRPVDALQLVQQEQVTSLFATPTH 254 (504)
T ss_dssp HHHHHHHHTT-----CCCSSTTCEEEECSCTTSHHHHTTTHHHHHHTTCEEEECSSCCHHHHHHHHHHHTCCEEECCHHH
T ss_pred HHHHHHHHhh-----CCCCCCCceEEeecchhhcchHHHHHHHHHHcCceEEeCCCCCHHHHHHHHHHhCCeEEEeChHH
Confidence 8887765554 45 7889999999999999985 47888999999999876 99999999999999999999999
Q ss_pred HHHHHHHHHHhhhcCChhhHHHHHHHHHhhhhccccCCCCCCccchhhHHHHHHHHHHhCCceeEEEEecCCCCHHHHHH
Q 014951 230 YDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEF 309 (415)
Q Consensus 230 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~~G~~~~~~~~~~ 309 (415)
+..+++....... .. ..++||.+++||+++++++.++
T Consensus 255 ~~~l~~~~~~~~~-----------------------------------~~--------~l~~lr~~~~gG~~l~~~~~~~ 291 (504)
T 1t5h_X 255 LDALAAAAAHAGS-----------------------------------SL--------KLDSLRHVTFAGATMPDAVLET 291 (504)
T ss_dssp HHHHHHHHCCTTC-----------------------------------CC--------CCTTCCEEEECCTTCCHHHHHH
T ss_pred HHHHHhhhccccc-----------------------------------cc--------cCccccEEEEcCCcCCHHHHHH
Confidence 9998753210000 00 0148999999999999999999
Q ss_pred HHHhcCCceEEeeccCCCCceeeeecCCcccccCcccccccCeEEEEeecCCC-CCCCCCCCCCCeEEEe-cCCcccccc
Q 014951 310 LRVTSGAPLTQGYGLTESCSGCFTSLADVFNMIGTVGVPMTTVEARLESVPEM-GYDALSSVPRGEICLR-GNTLFSGYY 387 (415)
Q Consensus 310 ~~~~~~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~G~~~~g~~~~i~~~~~~-~~~~~~~~~~Gel~v~-~~~~~~gY~ 387 (415)
+.+.++..+++.||+||++ .+.... ....+++|.|.++++++|++ +++ ...+++.|+.|||+|+ |+.++.||+
T Consensus 292 ~~~~~~~~~~~~YG~TE~~-~~~~~~---~~~~~~~g~p~~~~~~~i~~-~~~~~~~~~~~g~~GEl~v~gg~~~~~GY~ 366 (504)
T 1t5h_X 292 VHQHLPGEKVNIYGTTEAM-NSLYMR---QPKTGTEMAPGFFSEVRIVR-IGGGVDEIVANGEEGELIVAASDSAFVGYL 366 (504)
T ss_dssp HHHHCCSEEEEEEEETTTE-EEEEEE---SCSSSSEEBCCTTCCEEEEC-TTSCTTCBCCTTCCEEEEEECCTTSCCCBT
T ss_pred HHHhcCcceeeeecccccc-cccccc---CCCCCccccCCCCCceeEEe-ccCCCCCcCCCCCcceEEEeCCceeeceec
Confidence 9999999999999999993 333222 22348899999999999999 444 2245667799999999 999999999
Q ss_pred CCchhhhhhhcCCceecCceEEEcCCCC
Q 014951 388 KRPDLTEEVIVDGWFHTGDIGEWQPMEL 415 (415)
Q Consensus 388 ~~~~~~~~~~~~g~~~TGDlg~~d~~G~ 415 (415)
++|+.|.++|.+|||+|||+|++|+||+
T Consensus 367 ~~~~~t~~~f~~g~~~TGDlg~~~~dG~ 394 (504)
T 1t5h_X 367 NQPQATAEKLQDGWYRTSDVAVWTPEGT 394 (504)
T ss_dssp TCHHHHHHHEETTEEEEEEEEEECTTSC
T ss_pred CCchhhhhhhcCCccccCcEEEECCCce
Confidence 9999999999999999999999999995
No 13
>2v7b_A Benzoate-coenzyme A ligase; benzoate oxidation, benzoate COA ligase; 1.84A {Burkholderia xenovorans}
Probab=100.00 E-value=4.4e-55 Score=426.47 Aligned_cols=352 Identities=18% Similarity=0.247 Sum_probs=275.7
Q ss_pred CccCCCCCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEcCCChhhhhhcCccCCCC
Q 014951 1 MRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLY 80 (415)
Q Consensus 1 L~~~Gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~ 80 (415)
|+++|+++||+|+++++|++++++++|||+++|++++|+++.++.+++.+++++++++++|++.+....+....... ..
T Consensus 65 L~~~Gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~-~~ 143 (529)
T 2v7b_A 65 LRTLGVHPEERILLVMLDTVALPVAFLGALYAGVVPVVANTLLTPADYVYMLTHSHARAVIASGALVQNVTQALESA-EH 143 (529)
T ss_dssp HHHTTCCTTCEEEEECCSSTHHHHHHHHHHHHTCEEEECCTTCCHHHHHHHHHHHTCSEEEEEGGGHHHHHHHHHCC---
T ss_pred HHHcCCCCCCEEEEEcCCcHHHHHHHHHHHHcCceEEecCcccCHHHHHHHHhccCCeEEEechhhhhHHHHHHhhc-cc
Confidence 45789999999999999999999999999999999999999999999999999999999999987765554432211 12
Q ss_pred c-cEEEEecCCCchhhHHhhhcCceeecHHHHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEeecHHH-HHHhhh
Q 014951 81 L-KTIVSFANVSSSQKKEAEELGVSCFSWEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAI-VAEVLS 158 (415)
Q Consensus 81 ~-~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~th~~l-~~~~~~ 158 (415)
. +.++.++.... .......++++..............++|+++++|||||||.||+|++||+++ ......
T Consensus 144 ~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgv~~sh~~l~~~~~~~ 215 (529)
T 2v7b_A 144 DGCQLIVSQPRES--------EPRLAPLFEELIDAAAPAAKAAATGCDDIAFWLYSSGSTGKPKGTVHTHANLYWTAELY 215 (529)
T ss_dssp -CCEEEEECC--------------CCCBHHHHHHTSCCCSSCCCCCTTSEEEEEEC-----CCCEEEEEHHHHHHHHHHT
T ss_pred cCceEEEeccccc--------ccccccchhhhhccCCCcccccCCCCCCeEEEEECCCCCCCCceEEEEhhHHHHHHHHH
Confidence 2 34444433210 0001224566554332222334567899999999999999999999999999 555555
Q ss_pred hhhhhhhccccCCCCCEEEEeCChhhHHHHHH-HHHhhhcCcEEEEeC-C-CHHHHHHHHHhhCCeEEEeCcHHHHHHHH
Q 014951 159 VDQMFVVTGKVCSEEDTYFSFLPLAHIYDQII-ETHCIHKGCSIGFWR-G-DVRYLMEDIQELKPTMFSGVPRVYDRIYT 235 (415)
Q Consensus 159 ~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~-~~~~l~~G~~vv~~~-~-~~~~~~~~i~~~~~t~~~~~P~~~~~l~~ 235 (415)
....+ .+.+.|++++.+|++|.+++.. ++.++..|+++++.+ . ++..+++.|+++++|+++++|+++..+++
T Consensus 216 ~~~~~-----~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~ 290 (529)
T 2v7b_A 216 AKPIL-----GIAENDVVFSAAKLFFAYGLGNGLTFPLSVGATAILMAERPTADAIFARLVEHRPTVFYGVPTLYANMLV 290 (529)
T ss_dssp CCCCC-----CCCTTCEEEESSCTTSHHHHHHHTHHHHHHTCEEECCCSCCCHHHHHHHHHHSCCSEEEECHHHHHHHHT
T ss_pred hhhcc-----CCCCCcEEEEeecHHHHHHHHHHHHHHHhcCcEEEEecCCCCHHHHHHHHHHhCCEEEEecHHHHHHHHh
Confidence 44333 6788999999999999999875 567899999999873 3 99999999999999999999999988754
Q ss_pred HHHHhhhcCChhhHHHHHHHHHhhhhccccCCCCCCccchhhHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHHHhcC
Q 014951 236 GISNKISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSG 315 (415)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~~G~~~~~~~~~~~~~~~~ 315 (415)
... ..... ..++|.+++||+++++++.+++.+.++
T Consensus 291 ~~~----------------------------------~~~~~-----------~~~lr~~~~gGe~l~~~~~~~~~~~~g 325 (529)
T 2v7b_A 291 SPN----------------------------------LPARA-----------DVAIRICTSAGEALPREIGERFTAHFG 325 (529)
T ss_dssp CTT----------------------------------CCCGG-----------GCCCCEEEECSSCCCHHHHHHHHHHHS
T ss_pred Ccc----------------------------------ccccc-----------CCceEEEEEcCCCCCHHHHHHHHHHhC
Confidence 100 00000 027999999999999999999999899
Q ss_pred CceEEeeccCCCCceeeeecCCcccccCcccccccCeEEEEeecCCCCCCCCCCCCCCeEEEecCCccccccCCchhhhh
Q 014951 316 APLTQGYGLTESCSGCFTSLADVFNMIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEE 395 (415)
Q Consensus 316 ~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~G~~~~g~~~~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gY~~~~~~~~~ 395 (415)
+++++.||+||++.+++...... ...+++|+|+++++++|+| +++.. ++.|+.|||+|+||+++.|||++++.|.+
T Consensus 326 ~~i~~~YG~TE~~~~~~~~~~~~-~~~~~~G~p~~~~~~~i~d-~~g~~--~~~g~~GEl~v~g~~~~~gY~~~~~~t~~ 401 (529)
T 2v7b_A 326 CEILDGIGSTEMLHIFLSNRAGA-VEYGTTGRPVPGYEIELRD-EAGHA--VPDGEVGDLYIKGPSAAVMYWNNREKSRA 401 (529)
T ss_dssp CCEEEEEECTTTSSEEEECCTTC-CCTTSCCEECTTCEEEEEC-TTSCB--CCTTSCEEEEEECTTCCCCBTTCHHHHHH
T ss_pred CceeeeEchhhcCceeeccccCC-CccCCcccCCCCCEEEEEC-CCCCC--CCCCCccEEEEecCCcccccCCChHHHHH
Confidence 99999999999977665544333 3448999999999999999 77754 45679999999999999999999999999
Q ss_pred hhcCCceecCceEEEcCCCC
Q 014951 396 VIVDGWFHTGDIGEWQPMEL 415 (415)
Q Consensus 396 ~~~~g~~~TGDlg~~d~~G~ 415 (415)
.|.+|||+|||+|++|+||+
T Consensus 402 ~f~~~~~~TGDl~~~~~~G~ 421 (529)
T 2v7b_A 402 TFLGEWIRSGDKYCRLPNGC 421 (529)
T ss_dssp HEETTEEEEEEEEEECTTSC
T ss_pred hhhcCCcccCceEEECCCcc
Confidence 99999999999999999985
No 14
>3ivr_A Putative long-chain-fatty-acid COA ligase; structural genomics, PSI-2, protein S initiative, fatty acid synthesis; HET: GOL; 2.00A {Rhodopseudomonas palustris} SCOP: e.23.1.0
Probab=100.00 E-value=7.1e-55 Score=423.00 Aligned_cols=340 Identities=21% Similarity=0.303 Sum_probs=276.5
Q ss_pred CccCCCCCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEcCCChhhhhhcCccCCCC
Q 014951 1 MRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLY 80 (415)
Q Consensus 1 L~~~Gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~ 80 (415)
|+++|+++||+|+++++|++++++++|||+++|++++||++.++.+++.+++++++++++|++.+....+....... ..
T Consensus 48 L~~~Gv~~gd~V~i~~~~~~~~~~~~lA~~~~Ga~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~-~~ 126 (509)
T 3ivr_A 48 LLRDGVHTGDRVAILSQNCSEMIELIGAVALIGAILLPVNYRLNADEIAFVLGDGAPSVVVAGTDYRDIVAGVLPSL-GG 126 (509)
T ss_dssp HHHTTCCTTCEEEEECCSCHHHHHHHHHHHHTTCEEEECCTTSCHHHHHHHHHHHCEEEEEECSTTHHHHHHHGGGC-SS
T ss_pred HHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHhCCEEEecCCCCCHHHHHHHHHhcCceEEEECcchhhhHHhhhccc-CC
Confidence 45789999999999999999999999999999999999999999999999999999999999998877644443322 45
Q ss_pred ccEEEEecCCCchhhHHhhhcCceeecHHHHHh-cCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEeecHHHHHHhhhh
Q 014951 81 LKTIVSFANVSSSQKKEAEELGVSCFSWEEFLQ-LGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSV 159 (415)
Q Consensus 81 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~~~ 159 (415)
.+.++.++.... .+.++.. ............++|+++|+|||||||.||+|++||+++...+...
T Consensus 127 ~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~ 192 (509)
T 3ivr_A 127 VKKAYAIGDGSG--------------PFAPFKDLASDTPFSAPEFGAADGFVIIHTAAVGGRPRGALISQGNLLIAQSSL 192 (509)
T ss_dssp CCEEEESSCCCS--------------SCEEGGGTCCCSCCCCCCCCTTSEEEEEEEEC--CCEEEEEEEHHHHHHHHHHH
T ss_pred ceEEEEcCCCCc--------------ChhhHhhccCCCCCCcCCCCccccEEEEeCCCCCCCCcEEEEehHHHHHHHHHH
Confidence 566666654211 1111111 1122233456678999999999999999999999999999998887
Q ss_pred hhhhhhccccCCCCCEEEEeCChhhHHHHHHHHH-hhhcCcEEEEeCCCHHHHHHHHHhhCCeEEEeCcHHHHHHHHHHH
Q 014951 160 DQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETH-CIHKGCSIGFWRGDVRYLMEDIQELKPTMFSGVPRVYDRIYTGIS 238 (415)
Q Consensus 160 ~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~-~l~~G~~vv~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~ 238 (415)
...+ .+.++|++++.+|++|.+++...+. .+..|+.+++...++..+++.|+++++|++.++|+++..+++...
T Consensus 193 ~~~~-----~~~~~d~~l~~~p~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~ 267 (509)
T 3ivr_A 193 VDAW-----RLTEADVNLGMLPLFHVTGLGLMLTLQQAGGASVIAAKFDPAQAARDIEAHKVTVMAEFAPMLGNILDQAA 267 (509)
T ss_dssp HHHT-----TCCTTCEEEECSCTTSHHHHHHHHHHHHHTCEEEECSSCCHHHHHHHHHHHTCCEEEEETTHHHHHHHHCC
T ss_pred HHhh-----CCCCCcEEEEeCCCcchhHHHHHHHHHHhCCcEEEecccCHHHHHHHHHHHCCcEEEecHHHHHHHHhccc
Confidence 7766 7889999999999999999987665 455555555555599999999999999999999999999875210
Q ss_pred HhhhcCChhhHHHHHHHHHhhhhccccCCCCCCccchhhHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHHHhc-CCc
Q 014951 239 NKISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTS-GAP 317 (415)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~~G~~~~~~~~~~~~~~~-~~~ 317 (415)
..++ +++|.++++|++ ++.+.+.+.+ +++
T Consensus 268 ---------------------------------------~~~l--------~~lr~~~~~g~~---~~~~~~~~~~~~~~ 297 (509)
T 3ivr_A 268 ---------------------------------------PAQL--------ASLRAVTGLDTP---ETIERFEATCPNAT 297 (509)
T ss_dssp ---------------------------------------GGGG--------TTCCEEEEECCH---HHHHHHHHHCTTCE
T ss_pred ---------------------------------------ccch--------hhhheecccCCh---HHHHHHHHhcCCCe
Confidence 0001 389999999998 7777887777 899
Q ss_pred eEEeeccCCCCceeeeecCCcccccCcccccccCeEEEEeecCCCCCCCCCCCCCCeEEEecCCccccccCCchhhhhhh
Q 014951 318 LTQGYGLTESCSGCFTSLADVFNMIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVI 397 (415)
Q Consensus 318 ~~~~yG~tE~~~~~~~~~~~~~~~~~~~G~~~~g~~~~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gY~~~~~~~~~~~ 397 (415)
+++.||+||++.+++...... ...++|+|+++++++|+| +++. +++.|+.|||+|+||+++.|||++|+.|.++|
T Consensus 298 ~~~~YG~TE~~~~~~~~~~~~--~~~~~G~p~~~~~~~i~d-~~~~--~~~~g~~GEl~v~g~~~~~gY~~~~~~t~~~f 372 (509)
T 3ivr_A 298 FWATFGQSETSGLSTFAPYRD--RPKSAGRPLFWRTVAVVD-AEDR--PLPPGEVGEIVLRGPTVFKGYWNNAAATQHAF 372 (509)
T ss_dssp EEEEEEEGGGTEEEEEEEGGG--STTSCCEECTTCEEEEEC-TTSC--BCCTTCCEEEEEESTTSCCEETTCHHHHHHHT
T ss_pred EEcccCccccccccccCcccc--CCCcccccCCCcEEEEEC-CCCC--CCCCCCceEEEEecCCccccccCCHHHhHHHh
Confidence 999999999998776554332 225599999999999999 7765 45567999999999999999999999999999
Q ss_pred cCCceecCceEEEcCCCC
Q 014951 398 VDGWFHTGDIGEWQPMEL 415 (415)
Q Consensus 398 ~~g~~~TGDlg~~d~~G~ 415 (415)
.+|||+|||+|++|+||+
T Consensus 373 ~~g~~~TGDl~~~~~dG~ 390 (509)
T 3ivr_A 373 RNGWHHTGDMGRFDADGY 390 (509)
T ss_dssp GGGSEEEEEEEEECTTSC
T ss_pred hcCCcccccEEEECCCce
Confidence 999999999999999995
No 15
>3rg2_A Enterobactin synthase component E (ENTE), 2,3-DIH dihydroxybenzoate synthetase, isochroismatase...; adenylate-forming enzymes, ANL superfamily; HET: SVS PNS; 3.10A {Escherichia coli}
Probab=100.00 E-value=2.1e-54 Score=428.48 Aligned_cols=350 Identities=17% Similarity=0.231 Sum_probs=283.8
Q ss_pred CccCCCCCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEcCCChh-----hhhhcCc
Q 014951 1 MRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIP-----SILSCLP 75 (415)
Q Consensus 1 L~~~Gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~-----~~~~~~~ 75 (415)
|+++|+++||+|+++++|++++++++|||+++|++++|+++..+.+++.++++++++++++++..... .......
T Consensus 67 L~~~Gv~~gd~V~l~~~~s~~~vva~lA~l~aG~~~vpl~~~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~ 146 (617)
T 3rg2_A 67 LRRQGIKPGETALVQLGNVAELYITFFALLKLGVAPVLALFSHQRSELNAYASQIEPALLIADRQHALFSGDDFLNTFVT 146 (617)
T ss_dssp HHHTTCCTTCEEEEECCSSHHHHHHHHHHHHHTCEEEEECTTCCHHHHHHHHHHHCCSEEEEETTSGGGSSSHHHHHHHH
T ss_pred HHHcCCCCCCEEEEECCCcHHHHHHHHHHHhcCeEEccCCccccHHHHHHHHhhcCceEEEecccccccccHHHHHHHhh
Confidence 45789999999999999999999999999999999999999999999999999999999999987541 1111111
Q ss_pred cCCCCccEEEEecCCCchhhHHhhhcCceeecHHHHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEeecHHHHHH
Q 014951 76 RCCLYLKTIVSFANVSSSQKKEAEELGVSCFSWEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAE 155 (415)
Q Consensus 76 ~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~ 155 (415)
.....+.+...+.... ..+.+............+..++++++|+|||||||.||||+++|+++.+.
T Consensus 147 -~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~~~~~ 212 (617)
T 3rg2_A 147 -EHSSIRVVQLLNDSGE-------------HNLQDAINHPAEDFTATPSPADEVAYFQLSGGTTGTPKLIPRTHNDYYYS 212 (617)
T ss_dssp -HSTTCCEEEEETCCST-------------TBHHHHHHSCCSSCCCCCCCTTSEEEEEECCCSSSSCCEEEEEHHHHHHH
T ss_pred -cCCccceeeecccccc-------------cchhhhhcccccccCCCCCCCCCeEEEEECCCcCCCCCEeehhHHHHHHH
Confidence 1133444444433211 22334443333333345567899999999999999999999999999999
Q ss_pred hhhhhhhhhhccccCCCCCEEEEeCChhhHHHHHH--HHHhhhcCcEEEEeCC-CHHHHHHHHHhhCCeEEEeCcHHHHH
Q 014951 156 VLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQII--ETHCIHKGCSIGFWRG-DVRYLMEDIQELKPTMFSGVPRVYDR 232 (415)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~--~~~~l~~G~~vv~~~~-~~~~~~~~i~~~~~t~~~~~P~~~~~ 232 (415)
+......+ .+.++|++++++|++|.+++.. ++.+++.|+++++.+. ++..+++.++++++|++.++|+++..
T Consensus 213 ~~~~~~~~-----~~~~~~~~l~~~p~~~~~~~~~~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~ 287 (617)
T 3rg2_A 213 VRRSVEIC-----QFTQQTRYLCAIPAAHNYAMSSPGSLGVFLAGGTVVLAADPSATLCFPLIEKHQVNVTALVPPAVSL 287 (617)
T ss_dssp HHHHHHHH-----TCCTTCEEEECSCTTSHHHHHSSHHHHHHHHTCEEEECSSCCHHHHHHHHHHTTCCEEEECHHHHHH
T ss_pred HHHHHHhc-----CCCCcceEEEeccchhhhhhhHHHHHHHHHcCCEEEEeCCCCHHHHHHHHHHhCCcEEEcchHHHHH
Confidence 98877766 7889999999999999998874 7788999999999876 99999999999999999999999999
Q ss_pred HHHHHHHhhhcCChhhHHHHHHHHHhhhhccccCCCCCCccchhhHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHHH
Q 014951 233 IYTGISNKISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRV 312 (415)
Q Consensus 233 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~~G~~~~~~~~~~~~~ 312 (415)
+++......... ..+++|.+++||+++++++.+++.+
T Consensus 288 l~~~~~~~~~~~-------------------------------------------~l~~lr~i~~gGe~l~~~~~~~~~~ 324 (617)
T 3rg2_A 288 WLQALIEGESRA-------------------------------------------QLASLKLLQVGGARLSATLAARIPA 324 (617)
T ss_dssp HHHHHHTTCCTT-------------------------------------------TTTTCCEEEEESSCCCHHHHHHHHH
T ss_pred HHHhhhcccccc-------------------------------------------cCCCccEEEEcCCcCCHHHHHHHHH
Confidence 876433211000 0138999999999999999999999
Q ss_pred hcCCceEEeeccCCCCceeeeecCCcccccCcccccc-cCeEEEEeecCCCCCCCCCCCCCCeEEEecCCccccccCCch
Q 014951 313 TSGAPLTQGYGLTESCSGCFTSLADVFNMIGTVGVPM-TTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPD 391 (415)
Q Consensus 313 ~~~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~G~~~-~g~~~~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gY~~~~~ 391 (415)
.++.++++.||+||++..++...........++|+|+ ++++++|+| +++. +++.|+.|||+|+||++++||+++|+
T Consensus 325 ~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~G~p~~~~~~~~i~d-~~~~--~~p~G~~GEl~i~G~~v~~GY~~~p~ 401 (617)
T 3rg2_A 325 EIGCQLQQVFGMAEGLVNYTRLDDSAEKIIHTQGYPMCPDDEVWVAD-AEGN--PLPQGEVGRLMTRGPYTFRGYYKSPQ 401 (617)
T ss_dssp HTCSEEEEEEEETTEEEEECCTTSCHHHHHHCCCEESCTTCEEEEEC-TTSC--BCCTTCCEEEEEECSSSCSCCTTCHH
T ss_pred HhCCcEEEEeccCcceeecccCCCcccccccCCCccCCCCceEEEEC-CCCC--CCCCCCceEEEecCccccchhcCChh
Confidence 8999999999999987554433222223346889997 788999999 7775 45566999999999999999999999
Q ss_pred hhhhhh-cCCceecCceEEEcCCCC
Q 014951 392 LTEEVI-VDGWFHTGDIGEWQPMEL 415 (415)
Q Consensus 392 ~~~~~~-~~g~~~TGDlg~~d~~G~ 415 (415)
.|.++| .+|||+|||+|++|+||+
T Consensus 402 ~t~~~f~~~~~yrTGDl~~~~~dG~ 426 (617)
T 3rg2_A 402 HNASAFDANGFYCSGDLISIDPEGY 426 (617)
T ss_dssp HHHHHBCTTSCEEEEEEEEECTTSC
T ss_pred hhhhccCCCCceecCceEEEcCCce
Confidence 999999 799999999999999985
No 16
>1pg4_A Acetyl-COA synthetase; AMP-forming, adenylate-forming, thioester-forming, ligase; HET: COA PRX; 1.75A {Salmonella enterica} SCOP: e.23.1.1 PDB: 1pg3_A* 2p2f_A* 2p2b_A* 2p2q_A* 2p2j_A* 2p20_A* 2p2m_A*
Probab=100.00 E-value=6.5e-55 Score=434.01 Aligned_cols=360 Identities=15% Similarity=0.212 Sum_probs=283.2
Q ss_pred CccCCCCCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEcCCChh---------hhh
Q 014951 1 MRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIP---------SIL 71 (415)
Q Consensus 1 L~~~Gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~---------~~~ 71 (415)
|+++|+++||+|+|+++|++++++++|||+++|++++|+++.++++++.+++++++++++|+++.... .+.
T Consensus 124 L~~~Gv~~Gd~V~i~~~~~~e~vva~lA~~~~Gav~vpl~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~ 203 (652)
T 1pg4_A 124 LLDLGIKKGDVVAIYMPMVPEAAVAMLACARIGAVHSVIFGGFSPEAVAGCIIDSSSRLVITADEGVRAGRSIPLKKNVD 203 (652)
T ss_dssp HHHHTCCTTCEEEEECCSSHHHHHHHHHHHHHTCEEEECCTTSCHHHHHHHHHHHTCSEEEEESEEEETTEEEESHHHHH
T ss_pred HHHcCCCCCCEEEEEeCCCHHHHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHhcCCCEEEEcCccccCCcccchHHHHH
Confidence 45679999999999999999999999999999999999999999999999999999999999876421 122
Q ss_pred hcCccCC-CCccEEEEecCCCchhhHHhhhcCceeecHHHHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEeecH
Q 014951 72 SCLPRCC-LYLKTIVSFANVSSSQKKEAEELGVSCFSWEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQ 150 (415)
Q Consensus 72 ~~~~~~~-~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~th~ 150 (415)
....... ..++.++.++....... ........|++++.............++|+++|+|||||||.||||+++|+
T Consensus 204 ~~~~~~~~~~~~~vi~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~ilyTSGTTG~PKgV~~sh~ 279 (652)
T 1pg4_A 204 DALKNPNVTSVEHVIVLKRTGSDID----WQEGRDLWWRDLIEKASPEHQPEAMNAEDPLFILYTSGSTGKPKGVLHTTG 279 (652)
T ss_dssp HHHTSTTCCSCCEEEEECSSCCCCC----CCBTTEEEHHHHHTTSCSCCCCCCEETTSEEEEEEECCSSSSCEEEEEESH
T ss_pred HHHhcCCcCCCCEEEEEeCCCCccc----ccCCCceeHHHHHhhcCCCCCccccCCCCCEEEEeccCCCCCCceEEECch
Confidence 2221110 13456666654211000 000113456777654322233344568999999999999999999999999
Q ss_pred HHHHHhh-hhhhhhhhccccCCCCCEEEEeCChhhHHHHH-HHHHhhhcCcEEEEeCC-----CHHHHHHHHHhhCCeEE
Q 014951 151 AIVAEVL-SVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQI-IETHCIHKGCSIGFWRG-----DVRYLMEDIQELKPTMF 223 (415)
Q Consensus 151 ~l~~~~~-~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~-~~~~~l~~G~~vv~~~~-----~~~~~~~~i~~~~~t~~ 223 (415)
+++.... .....+ .+.++|++++.+|++|..+.. .++.+++.|+++++.+. ++..+++.|+++++|++
T Consensus 280 ~~~~~~~~~~~~~~-----~~~~~d~~l~~~~~~~~~g~~~~~~~~L~~G~t~vl~~~~~~~~~~~~~~~~i~~~~vt~~ 354 (652)
T 1pg4_A 280 GYLVYAATTFKYVF-----DYHPGDIYWCTADVGWVTGHSYLLYGPLACGATTLMFEGVPNWPTPARMCQVVDKHQVNIL 354 (652)
T ss_dssp HHHHHHHHHHHHHT-----TCCTTCEEEECSCTTSHHHHHHTTHHHHHTTCEEEEECSCTTSSSTTHHHHHHHHHTCSEE
T ss_pred HHHHHHHHHHHHhc-----CCCCCCEEEEccCCeeeechHHHHHHHHHcCceEEEECCCCCCCCHHHHHHHHHHhCCeEE
Confidence 9887664 333334 678999999999999999985 47889999999999863 78999999999999999
Q ss_pred EeCcHHHHHHHHHHHHhhhcCChhhHHHHHHHHHhhhhccccCCCCCCccchhhHHHHHHHHHHhCCceeEEEEecCCCC
Q 014951 224 SGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLP 303 (415)
Q Consensus 224 ~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~~G~~~~ 303 (415)
+++|++++.+++..... ....+ .++||.+++|||+++
T Consensus 355 ~~~P~~~~~l~~~~~~~-----------------------------------~~~~~--------l~sLr~i~~gGe~l~ 391 (652)
T 1pg4_A 355 YTAPTAIRALMAEGDKA-----------------------------------IEGTD--------RSSLRILGSVGEPIN 391 (652)
T ss_dssp EECHHHHHHHHTTGGGG-----------------------------------TTTCC--------CTTCCEEEEESSCCC
T ss_pred EeCHHHHHHHHhcCccc-----------------------------------cccCC--------cCceEEEEEecCCCC
Confidence 99999999886521100 00001 148999999999999
Q ss_pred HHHHHHHHHhcC---CceEEeeccCCCCceeeeecCC-cccccCcccccccCeEEEEeecCCCCCCCCCCCCCCeEEEec
Q 014951 304 IHVEEFLRVTSG---APLTQGYGLTESCSGCFTSLAD-VFNMIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRG 379 (415)
Q Consensus 304 ~~~~~~~~~~~~---~~~~~~yG~tE~~~~~~~~~~~-~~~~~~~~G~~~~g~~~~i~~~~~~~~~~~~~~~~Gel~v~~ 379 (415)
+++.+++.+.++ +++++.||+||++..++...+. .....+++|+|++|++++|+| +++..+ +.|+.|||+|+|
T Consensus 392 ~~~~~~~~~~~g~~~~~i~~~YG~TE~~~~~~~~~~~~~~~~~~s~G~p~~g~~v~i~d-~~g~~v--~~g~~GEl~i~g 468 (652)
T 1pg4_A 392 PEAWEWYWKKIGKEKCPVVDTWWQTETGGFMITPLPGAIELKAGSATRPFFGVQPALVD-NEGHPQ--EGATEGNLVITD 468 (652)
T ss_dssp HHHHHHHHHHTTTTCSCEEEEBCCGGGSSCSBCCCTTTCCBCTTCCBSBCTTCCEEEEC-TTCCBC--CSSEEEEEEECS
T ss_pred HHHHHHHHHHhCCCCCcEEccccCcccccceecCCCCCcCccCCccccCcCCCeEEEEC-CCCCCc--CCCceEEEEEcc
Confidence 999999999888 8999999999998766654432 233458999999999999999 777544 456899999999
Q ss_pred --CCccccccCCchhhhhhh---cCCceecCceEEEcCCCC
Q 014951 380 --NTLFSGYYKRPDLTEEVI---VDGWFHTGDIGEWQPMEL 415 (415)
Q Consensus 380 --~~~~~gY~~~~~~~~~~~---~~g~~~TGDlg~~d~~G~ 415 (415)
|+++.|||++++.+.+.| .+|||+|||+|++|+||+
T Consensus 469 ~~p~~~~gY~~~~e~~~~~~~~~~~g~y~TGDlg~~d~dG~ 509 (652)
T 1pg4_A 469 SWPGQARTLFGDHERFEQTYFSTFKNMYFSGDGARRDEDGY 509 (652)
T ss_dssp CCTTCCCEETTCHHHHHHHHHSSSTTSEEEEEEEEECTTSC
T ss_pred CCCchhhhhcCCHHHHHhhhhhcCCCEEECCcEEEEcCCCc
Confidence 799999999999988876 389999999999999996
No 17
>3t5a_A Long-chain-fatty-acid--AMP ligase FADD28; acetyl-COA synthetase like fold, AMP-binding; 2.05A {Mycobacterium tuberculosis} PDB: 3e53_A
Probab=100.00 E-value=3.3e-55 Score=422.88 Aligned_cols=342 Identities=17% Similarity=0.201 Sum_probs=264.5
Q ss_pred CccCCCCCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCC---CCCHHHHHHHHHhcCceEEEEcCCChhhhhhcCccC
Q 014951 1 MRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYD---TLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRC 77 (415)
Q Consensus 1 L~~~Gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~---~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~ 77 (415)
|+++|+ +||+|+|+++|++++++++|||+++|++++||++ .++.+++.+++++++++++|++.+....+.......
T Consensus 75 L~~~g~-~gd~V~i~~~n~~e~~~~~lA~~~~G~v~vpl~~~~~~~~~~~l~~il~~~~~~~vi~~~~~~~~~~~~~~~~ 153 (480)
T 3t5a_A 75 LSRCGS-TGDRVVISAPQGLEYVVAFLGALQAGRIAVPLSVPQGGVTDERSDSVLSDSSPVAILTTSSAVDDVVQHVARR 153 (480)
T ss_dssp HTTSSC-TTCEEEEECCSSHHHHHHHHHHHHTTCEEEEECSCCSCTTCCHHHHHHHHHCCSEEEECTTTHHHHHHTCC--
T ss_pred HHhcCC-CCCEEEEEcCCcHHHHHHHHHHHHhCcEEEeeCCCCccchHHHHHHHHHhCCCCEEEeChhHHHHHHHHHhcc
Confidence 467886 9999999999999999999999999999999999 788999999999999999999998877766544322
Q ss_pred CC-CccEEEEecCCCchhhHHhhhcCceeecHHHHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEeecHHHHHHh
Q 014951 78 CL-YLKTIVSFANVSSSQKKEAEELGVSCFSWEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEV 156 (415)
Q Consensus 78 ~~-~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~ 156 (415)
.. ....++.++... .............++++++|+|||||||.||||++||+++..++
T Consensus 154 ~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~th~~l~~~~ 212 (480)
T 3t5a_A 154 PGESPPSIIEVDLLD---------------------LDAPNGYTFKEDEYPSTAYLQYTSGSTRTPAGVVMSHQNVRVNF 212 (480)
T ss_dssp ----CCEEEEGGGSC---------------------TTCC---CCCCSSCCSEEEEECC------CCCEEEEHHHHHHHH
T ss_pred ccccccceeEecccc---------------------cccccCCCCCCCCCCceEEEEecCCCCCCCcEEEEeHHHHHHHH
Confidence 10 111233322211 01111223345578899999999999999999999999999988
Q ss_pred hhhhhhhhhccccCCC------CCEEEEeCChhhHHHHHH-HHHhhhcCcEEEEeCC-----CHHHHHHHHHhhCCeEEE
Q 014951 157 LSVDQMFVVTGKVCSE------EDTYFSFLPLAHIYDQII-ETHCIHKGCSIGFWRG-----DVRYLMEDIQELKPTMFS 224 (415)
Q Consensus 157 ~~~~~~~~~~~~~~~~------~d~~l~~~p~~~~~~~~~-~~~~l~~G~~vv~~~~-----~~~~~~~~i~~~~~t~~~ 224 (415)
......+ .+.. .|++++++|++|.+++.. ++.+++.|+++++.+. ++..+++.|+++++| +.
T Consensus 213 ~~~~~~~-----~~~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~~~i~~~~~t-~~ 286 (480)
T 3t5a_A 213 EQLMSGY-----FADTDGIPPPNSALVSWLPFYHDMGLVIGICAPILGGYPAVLTSPVSFLQRPARWMHLMASDFHA-FS 286 (480)
T ss_dssp HHHHHHH-----CTTTTTCCCTTEEEEECCCTTSTTHHHHHTHHHHHHTCCEEECCHHHHHHCTHHHHHHTTSSSEE-EE
T ss_pred HHHHHHh-----ccccccCCCCCCeEEEeCCCcCccHHHHHHHHHHHcCCceEEECHHHHHHCHHHHHHHHHhhcee-Ee
Confidence 8776655 3444 899999999999999875 7788999999999863 899999999999999 88
Q ss_pred eCcHHHHHHHHHHHHhhhcCChhhHHHHHHHHHhhhhccccCCCCCCccchhhHHHHHHHHHHhCCceeEEEEecCCCCH
Q 014951 225 GVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPI 304 (415)
Q Consensus 225 ~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~~G~~~~~ 304 (415)
++|+++..++...... ......+ .++||.+++||+++++
T Consensus 287 ~~p~~~~~l~~~~~~~---------------------------------~~~~~~~--------l~~lr~i~~gG~~l~~ 325 (480)
T 3t5a_A 287 AAPNFAFELAARRTTD---------------------------------DDMAGRD--------LGNILTILSGSERVQA 325 (480)
T ss_dssp EECHHHHHHHHHHCCT---------------------------------GGGTTCC--------CTTCCEEEECCTTCCH
T ss_pred eChHHHHHHHHhhcCc---------------------------------ccccccc--------hhhhheeeecCCcCCH
Confidence 9999988876522100 0000111 1489999999999999
Q ss_pred HHHHHHHHhcC------CceEEeeccCCCCceeeeecCCc------------------------ccccCcccccccCeEE
Q 014951 305 HVEEFLRVTSG------APLTQGYGLTESCSGCFTSLADV------------------------FNMIGTVGVPMTTVEA 354 (415)
Q Consensus 305 ~~~~~~~~~~~------~~~~~~yG~tE~~~~~~~~~~~~------------------------~~~~~~~G~~~~g~~~ 354 (415)
++.+++.+.++ ..+++.||+||++..++...... ....+++|+|++ +++
T Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~G~p~~-~~~ 404 (480)
T 3t5a_A 326 ATIKRFADRFARFNLQERVIRPSYWLAEATVYVATSKPGQPPETVDFDTESLSAGHAKPCAGGGATSLISYMLPRS-PIV 404 (480)
T ss_dssp HHHHHHHHHSGGGTCCGGGEEEEEEETTTTEEEEECCTTSSCCEEEECHHHHHTTBCCCCCSSSCEEEECEECCSS-SEE
T ss_pred HHHHHHHHHHhhcCCChhhccccccccccceeEeecccCCCcceEEecHHHhccCceeecCCCCcceeeecCcccC-CEE
Confidence 99999998874 47999999999998877654332 123468999999 999
Q ss_pred EEeecCCCCCCCCCCCCCCeEEEecCCccccccCCchhhhhhh------------cCCceecCceEEEcCCCC
Q 014951 355 RLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVI------------VDGWFHTGDIGEWQPMEL 415 (415)
Q Consensus 355 ~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gY~~~~~~~~~~~------------~~g~~~TGDlg~~d~~G~ 415 (415)
+|+| ++++ .+++.|+.|||+|+||+++.|||++|++|.++| .+|||+|||+|++| ||+
T Consensus 405 ~ivd-~~~g-~~~~~g~~GEl~v~g~~v~~GY~~~pe~t~~~f~~~~~~~~~~~~~~~w~~TGDlg~~d-dG~ 474 (480)
T 3t5a_A 405 RIVD-SDTC-IECPDGTVGEIWVHGDNVANGYWQKPDESERTFGGKIVTPSPGTPEGPWLRTGDSGFVT-DGK 474 (480)
T ss_dssp EEEE-TTTT-EECCTTBCEEEEEESTTSCCCBTTBHHHHHHHHCBCCSSCCTTCCCCCBEEEEEEEEEE-TTE
T ss_pred EEEc-CCCC-cCCCCCCEEEEEEeCCccccccccCcchhHHHHhhhhccccCCCCCCCeeeccceeeEE-CCE
Confidence 9999 5532 445667999999999999999999999999998 36799999999997 885
No 18
>4gr5_A Non-ribosomal peptide synthetase; MBTH-like domain, adenylation domain, ligase, rossmann fold, binding; HET: APC TLA; 1.92A {Streptomyces lydicus} PDB: 4gr4_A
Probab=100.00 E-value=9.3e-55 Score=427.34 Aligned_cols=329 Identities=17% Similarity=0.209 Sum_probs=267.3
Q ss_pred CccCCCCCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEcCCChhhhhhcCccCCCC
Q 014951 1 MRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLY 80 (415)
Q Consensus 1 L~~~Gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~ 80 (415)
|+++|+++||+|+|+++|++++++++|||+++|++++|++|.++.+++.+++++++++++|++.+....+. .
T Consensus 117 L~~~Gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~--------~ 188 (570)
T 4gr5_A 117 LVGLGVAPGTLVGVHLERGFDMVVALLAVLKAGGGYTMLDPQFPVERLALSLEDTGAPLLVTSRPLSGRLT--------G 188 (570)
T ss_dssp HHHTTCCTTCEEEEECCSSHHHHHHHHHHHHTTCEEEECCTTSCHHHHHHHHHHHTCSEEEECTTTTTSSC--------S
T ss_pred HHHcCCCCCCEEEEEeCCCHHHHHHHHHHHHHCCEEEEcCCCChHHHHHHHHHhcCCCEEEecchhhhccc--------C
Confidence 45789999999999999999999999999999999999999999999999999999999999986543321 1
Q ss_pred ccEEEEecCCCchhhHHhhhcCceeecHHHHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEeecHHHHHHhhhhh
Q 014951 81 LKTIVSFANVSSSQKKEAEELGVSCFSWEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVD 160 (415)
Q Consensus 81 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~~~~ 160 (415)
...+...+.. ..............++|+++|+|||||||.||||++||+++.+.....
T Consensus 189 ~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~- 246 (570)
T 4gr5_A 189 TTTLYVEDEA---------------------ASDAPAGNLATGVGPEDVACVMFTSGSTGRPKGVMSPHRALTGTYLGQ- 246 (570)
T ss_dssp SEEEECCC----------------------------CCCCCCCCCTTSEEEEECCSSCCSSCCCEEEEHHHHHHHHSSC-
T ss_pred Ccceeeeccc---------------------cccccccccCCCCCCCCeEEEEECCcCCCCCeEEEEecHHHHHHHHhh-
Confidence 1111111110 000011122334578999999999999999999999999998776552
Q ss_pred hhhhhccccCCCCCEEEEeCChhhHHHHHHHHHhhhcCcEEEEeCC---CHHHHHHHHHhhCCeEEEeCcHHHHHHHHHH
Q 014951 161 QMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG---DVRYLMEDIQELKPTMFSGVPRVYDRIYTGI 237 (415)
Q Consensus 161 ~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~vv~~~~---~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~ 237 (415)
..+ .+.++|++++++|++|..+...++.+++.|+++++.+. ++..+++.|+++++|++.++|+++..+++..
T Consensus 247 ~~~-----~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~ 321 (570)
T 4gr5_A 247 DYA-----GFGPDEVFLQCSPVSWDAFGLELFGALLFGARCVLQSGQNPDPLEIGELVARHGVTMLQLSASLFNFLVDEV 321 (570)
T ss_dssp CSS-----CCSTTCEEEECSCTTSSTHHHHHHHHHTTTCEEEECSSSSCCHHHHHHHHHHHTCCEEEEEHHHHHHHHHHC
T ss_pred hhc-----CCCCCCEEEEecCccHHHHHHHHHHHHhcCCEEEEcCCccCCHHHHHHHHHHcCCcEEEecHHHHHHHHhhc
Confidence 222 67889999999999998777778889999999999863 8999999999999999999999999886521
Q ss_pred HHhhhcCChhhHHHHHHHHHhhhhccccCCCCCCccchhhHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHHHhc-CC
Q 014951 238 SNKISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTS-GA 316 (415)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~~G~~~~~~~~~~~~~~~-~~ 316 (415)
.. + .++||.+++||+++++++.+.+.+.+ ++
T Consensus 322 ~~----------------------------------------~--------~~~lr~~~~gG~~l~~~~~~~~~~~~~~~ 353 (570)
T 4gr5_A 322 PE----------------------------------------A--------FEGVRYAITGGEPASVPHVAKARRDHPAL 353 (570)
T ss_dssp GG----------------------------------------G--------GTTCSEEEEESSCCCHHHHHHHHHHCTTC
T ss_pred hh----------------------------------------h--------CCCceEEEEecccCCHHHHHHHHHhCCCc
Confidence 10 0 14899999999999999888887776 78
Q ss_pred ceEEeeccCCCCceeeeecCCcc---cccCcccccccCeEEEEeecCCCCCCCCCCCCCCeEEEecCCccccccCCchhh
Q 014951 317 PLTQGYGLTESCSGCFTSLADVF---NMIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLT 393 (415)
Q Consensus 317 ~~~~~yG~tE~~~~~~~~~~~~~---~~~~~~G~~~~g~~~~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gY~~~~~~~ 393 (415)
++++.||+||+++.++....... ....++|+|+++++++|+| +++.. ++.|+.|||+|+||+++.|||++|+.|
T Consensus 354 ~l~~~YG~TE~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~v~i~d-~~~~~--~~~G~~GEl~v~g~~v~~GY~~~~~~t 430 (570)
T 4gr5_A 354 RLGNGYGPAESMGFTTHHAVVAGDLSGTALPIGVPLAGKRAYVLD-DDLKP--AANGALGELYVAGAGLAHGYVSRPALT 430 (570)
T ss_dssp EEEEEECCGGGCSCSEEEECCGGGTTSSSCCCBEECTTEEEEEEC-TTSCB--CCTTCEEEEEEEETTCCCEETTCHHHH
T ss_pred EEEEeechhhheeeeeeeeecccccCCCccccceeeCCCEEEEEC-CCCCC--CCCCCcEEEEEeecccchhcCCCchhh
Confidence 99999999999887665433222 2246799999999999999 77654 556799999999999999999999999
Q ss_pred hhhh-cC--------CceecCceEEEcCCCC
Q 014951 394 EEVI-VD--------GWFHTGDIGEWQPMEL 415 (415)
Q Consensus 394 ~~~~-~~--------g~~~TGDlg~~d~~G~ 415 (415)
.++| .+ |||+|||+|++|+||+
T Consensus 431 ~~~f~~~~~~~~~~~~w~~TGDlg~~d~dG~ 461 (570)
T 4gr5_A 431 AERFVADPFAGPGGERMYRTGDLARRRADGV 461 (570)
T ss_dssp HHHEEECTTCCSSCCEEEEEEEEEEECTTSC
T ss_pred hcccccCCCCCCCCCEEEeCCCeEEECCCCe
Confidence 9998 33 7999999999999996
No 19
>1ry2_A Acetyl-coenzyme A synthetase 1, acyl-activating enzyme 1; AMP forming, related to firefly luciferase, ligase; HET: AMP; 2.30A {Saccharomyces cerevisiae} SCOP: e.23.1.1
Probab=100.00 E-value=2.5e-54 Score=429.96 Aligned_cols=359 Identities=19% Similarity=0.242 Sum_probs=281.6
Q ss_pred cCCCCCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEcCCChh---------hhhhc
Q 014951 3 SRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIP---------SILSC 73 (415)
Q Consensus 3 ~~Gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~---------~~~~~ 73 (415)
++||++||+|+|+++|++|+++++|||+++|++++|+++.++++++.+++++++++++|+++.... .+...
T Consensus 133 ~~Gv~~Gd~V~i~~~~~~e~v~a~lA~~~~Gav~vpl~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~ 212 (663)
T 1ry2_A 133 SMGVRKGDTVAVYMPMVPEAIITLLAISRIGAIHSVVFAGFSSNSLRDRINDGDSKVVITTDESNRGGKVIETKRIVDDA 212 (663)
T ss_dssp TSCCCTTCEEEECCCSSHHHHHHHHHHHHTTCEEEECCTTSCHHHHHHHHHHHTCSEEEEESBCCBTTBCCBHHHHHHHH
T ss_pred hcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEeeCCCCCHHHHHHHHHhcCCeEEEEccccccCCcccchHHHHHHH
Confidence 789999999999999999999999999999999999999999999999999999999999876532 22222
Q ss_pred CccCCCCccEEEEecCCCchhhHHhhhcCceeecHHHHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEeecHHHH
Q 014951 74 LPRCCLYLKTIVSFANVSSSQKKEAEELGVSCFSWEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIV 153 (415)
Q Consensus 74 ~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~th~~l~ 153 (415)
... .+.++.+++++....... .........|.++........+..+..++|+++|+|||||||.||||+++|.+++
T Consensus 213 ~~~-~~~~~~vi~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~ilyTSGTTG~PKgV~~sh~~~~ 288 (663)
T 1ry2_A 213 LRE-TPGVRHVLVYRKTNNPSV---AFHAPRDLDWATEKKKYKTYYPCTPVDSEDPLFLLYTSGSTGAPKGVQHSTAGYL 288 (663)
T ss_dssp TTS-CTTCCEEEEECSSCCSSC---CCCSSSEEEHHHHHTTSCSCCCCCCEETTSCCEEEEECCSSSSCEEEEECSHHHH
T ss_pred HHh-CCCCceEEEEecCCCCcc---ccCCCccccHHHHHhhcCCCCCccccCCCCceEEEeccCCCCCCceEEEchhHHH
Confidence 222 234566776654211000 0001123456666654322233345678999999999999999999999999988
Q ss_pred HHhhh-hhhhhhhccccCCCCCEEEEeCChhhHHHHHH-HHHhhhcCcEEEEeCC-----CHHHHHHHHHhhCCeEEEeC
Q 014951 154 AEVLS-VDQMFVVTGKVCSEEDTYFSFLPLAHIYDQII-ETHCIHKGCSIGFWRG-----DVRYLMEDIQELKPTMFSGV 226 (415)
Q Consensus 154 ~~~~~-~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~-~~~~l~~G~~vv~~~~-----~~~~~~~~i~~~~~t~~~~~ 226 (415)
..... ....+ .+.++|++++..|++|..+..+ ++.+++.|+++++.+. ++..+++.|+++++|+++++
T Consensus 289 ~~~~~~~~~~~-----~~~~~d~~~~~~~~~~~~g~~~~~~~~L~~G~t~v~~~~~~~~~~~~~~~~~i~~~~vt~~~~~ 363 (663)
T 1ry2_A 289 LGALLTMRYTF-----DTHQEDVFFTAGDIGWITGHTYVVYGPLLYGCATLVFEGTPAYPNYSRYWDIIDEHKVTQFYVA 363 (663)
T ss_dssp HHHHHHHHHHS-----CCCSSCEEEECSCTTSHHHHHHTTHHHHHHTSEEEEECSCTTSSCTTHHHHHHHHTTCSEEEEC
T ss_pred HHHHHHHHHhc-----CCCCCcEEEEcCCcHHhhhhHHHHHHHHHhCCEEEEECCCCCCCCHHHHHHHHHHcCCCEEEec
Confidence 76643 33334 6789999999999999999854 7789999999999863 78999999999999999999
Q ss_pred cHHHHHHHHHHHHhhhcCChhhHHHHHHHHHhhhhccccCCCCCCccchhhHHHHHHHHHHhCCceeEEEEecCCCCHHH
Q 014951 227 PRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHV 306 (415)
Q Consensus 227 P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~~G~~~~~~~ 306 (415)
|++++.+.+.... .....++ ++||.+++|||++++++
T Consensus 364 Ps~~~~l~~~~~~-----------------------------------~~~~~~l--------~sLr~i~~gGe~l~~~~ 400 (663)
T 1ry2_A 364 PTALRLLKRAGDS-----------------------------------YIENHSL--------KSLRCLGSVGEPIAAEV 400 (663)
T ss_dssp HHHHHHHTTSCTT-----------------------------------SSSSCCC--------TTCCEEEECSSCCCHHH
T ss_pred HHHHHHHHhcCcc-----------------------------------ccccCCc--------CceEEEEEEcCCCCHHH
Confidence 9999887531000 0000011 48999999999999999
Q ss_pred HHHHHHhcC---CceEEeeccCCCCceeeeecC--CcccccCcccccccCeEEEEeecC-CCCCCCCCCCCCCeEEEec-
Q 014951 307 EEFLRVTSG---APLTQGYGLTESCSGCFTSLA--DVFNMIGTVGVPMTTVEARLESVP-EMGYDALSSVPRGEICLRG- 379 (415)
Q Consensus 307 ~~~~~~~~~---~~~~~~yG~tE~~~~~~~~~~--~~~~~~~~~G~~~~g~~~~i~~~~-~~~~~~~~~~~~Gel~v~~- 379 (415)
.+++.+.++ +++++.||+||++..++...+ ....+.+++|+|++|++++|+| + ++..++. .|+.|||+++|
T Consensus 401 ~~~~~~~~g~~~~~i~~~YG~TE~~~~~~~~~~~~~~~~~~gs~G~p~~g~~v~i~d-~~~g~~v~~-~g~~Gel~i~g~ 478 (663)
T 1ry2_A 401 WEWYSEKIGKNEIPIVDTYWQTESGSHLVTPLAGGVTPMKPGSASFPFFGIDAVVLD-PNTGEELNT-SHAEGVLAVKAA 478 (663)
T ss_dssp HHHHHHTTSCSSSCEEECBCCTTTCSCSEECCTTTCCCCCTTCCCEECTTCCEEEEC-SSSTTCEEC-SSCEEEEEESSC
T ss_pred HHHHHHHhCCCCceEEEeECCccccCeeeccCCCCCcccCCCccccCcCCCeEEEEc-CCCCCcCCC-CCcceEEEEecC
Confidence 999999888 899999999999876665543 2233458999999999999999 6 6654432 26899999999
Q ss_pred -CCccccccCCchhhhhhh---cCCceecCceEEEcCCCC
Q 014951 380 -NTLFSGYYKRPDLTEEVI---VDGWFHTGDIGEWQPMEL 415 (415)
Q Consensus 380 -~~~~~gY~~~~~~~~~~~---~~g~~~TGDlg~~d~~G~ 415 (415)
|+++.|||++++.+.+.| .+|||+|||+|++|+||+
T Consensus 479 ~p~~~~gy~~~~~~~~~~~~~~~~g~y~TGDlg~~d~dG~ 518 (663)
T 1ry2_A 479 WPSFARTIWKNHDRYLDTYLNPYPGYYFTGDGAAKDKDGY 518 (663)
T ss_dssp CTTSCCEETTCHHHHHHHHTSSSTTSEEEEEEEEECTTCC
T ss_pred CCchhcccccChHHHHHhhhcCCCCEEEcCCEEEEcCCCC
Confidence 589999999999998887 279999999999999996
No 20
>4dg8_A PA1221; ANL superfamily, adenylation domain, peptidyl carrier protei ribosomal peptide synthetase, NRPS, valine adenylation, LIG; HET: AMP; 2.15A {Pseudomonas aeruginosa} PDB: 4dg9_A*
Probab=100.00 E-value=4.3e-54 Score=424.77 Aligned_cols=328 Identities=17% Similarity=0.139 Sum_probs=265.9
Q ss_pred CccCCCCCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEcCCChhhhhhcCccCCCC
Q 014951 1 MRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLY 80 (415)
Q Consensus 1 L~~~Gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~ 80 (415)
|+++|+++||+|+|+++|++++++++|||+++|++++||+|.++.+++.+++++++++++|++.........
T Consensus 69 L~~~Gv~~g~~V~i~~~~s~~~vva~lailkaGa~~vpld~~~p~~~l~~il~~~~~~~vl~~~~~~~~~~~-------- 140 (620)
T 4dg8_A 69 LLEHYPQPGVCLGVYGEYSRESITCLLAILLSGHHYLYIDLKQPAAWNAELCRQVDCRLILDCSTTPTPANG-------- 140 (620)
T ss_dssp HHHHCCSSCCEEEEESSSCHHHHHHHHHHHHTTCEEEECCTTSCHHHHHHHHHHHTEEEEEECCSSCCCCTT--------
T ss_pred HHHcCCCCCCEEEEEeCCCHHHHHHHHHHHHhCCEEEeeCccChHHHHHHHHHhCCCcEEEecCcccccccC--------
Confidence 456799999999999999999999999999999999999999999999999999999999976653321110
Q ss_pred ccEEEEecCCCchhhHHhhhcCceeecHHHHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEeecHHHHHHhhhhh
Q 014951 81 LKTIVSFANVSSSQKKEAEELGVSCFSWEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVD 160 (415)
Q Consensus 81 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~~~~ 160 (415)
...+ .+. ... ........+...++++++|+|||||||.||||+++|+++.+.+.. .
T Consensus 141 ~~~~-~~~---------------------~~~-~~~~~~~~~~~~~~d~a~iiyTSGSTG~PKgV~~th~~l~~~~~~-~ 196 (620)
T 4dg8_A 141 LPCV-PVR---------------------HLP-AAPASVARPCFAADQIAYINFSSGTTGRPKAIACTHAGITRLCLG-Q 196 (620)
T ss_dssp SCEE-EGG---------------------GCC-CCCCCSSCCCCCTTSEEEEEEEBSSSSSCEEEEEEHHHHHHHHSS-C
T ss_pred Ccee-eec---------------------cCC-cCCccccCCCCCCCCeEEEEECCCccccCeEEEEchHHHHHHHHH-H
Confidence 0010 000 000 001112233456899999999999999999999999999887765 3
Q ss_pred hhhhhccccCCCCCEEEEeCChhhHHHHHHHHHhhhcCcEEEEeCC---CHHHHHHHHHhhCCeEEEeCcHHHHHHHHHH
Q 014951 161 QMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG---DVRYLMEDIQELKPTMFSGVPRVYDRIYTGI 237 (415)
Q Consensus 161 ~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~vv~~~~---~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~ 237 (415)
..+ .+.++|++++++|++|..++..++.+++.|+++++.+. ++..+++.|+++++|+++++|+++..+++..
T Consensus 197 ~~~-----~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~i~~~~vt~~~~~Ps~~~~l~~~~ 271 (620)
T 4dg8_A 197 SFL-----AFAPQMRFLVNSPLSFDAATLEIWGALLNGGCCVLNDLGPLDPGVLRQLIGERGADSAWLTASLFNTLVDLD 271 (620)
T ss_dssp GGG-----TTCTTCEEEECSCTTSTHHHHHHHHHHTTTCEEEECCSSSCCHHHHHHHHHTTCCCEEEEEHHHHHHHHHHC
T ss_pred Hhh-----CCCCCCEEEEECccCHHHHHHHHHHHHhcCCEEEeCccccCCHHHHHHHHHHhCCcEEEccHHHHHHHHhcC
Confidence 333 67899999999999999999888999999999998742 8999999999999999999999999876410
Q ss_pred HHhhhcCChhhHHHHHHHHHhhhhccccCCCCCCccchhhHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHHHhc-CC
Q 014951 238 SNKISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTS-GA 316 (415)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~~G~~~~~~~~~~~~~~~-~~ 316 (415)
. .+ .++||.+++|||+++++..+.+.+.+ ++
T Consensus 272 ~----------------------------------------~~--------l~~lr~v~~gGe~l~~~~~~~~~~~~~~~ 303 (620)
T 4dg8_A 272 P----------------------------------------DC--------LGGLRQLLTGGDILSVPHVRRALLRHPRL 303 (620)
T ss_dssp G----------------------------------------GG--------GTTCSEEEEESSCCCHHHHHHHHHHCTTC
T ss_pred h----------------------------------------hh--------CCCccEEEEEeCcCCHHHHHHHHHhCCCe
Confidence 0 00 14899999999999988777766554 78
Q ss_pred ceEEeeccCCCCceeeeecCCc---ccccCcccccccCeEEEEeecCCCCCCCCCCCCCCeEEEecCCccccccCCchhh
Q 014951 317 PLTQGYGLTESCSGCFTSLADV---FNMIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLT 393 (415)
Q Consensus 317 ~~~~~yG~tE~~~~~~~~~~~~---~~~~~~~G~~~~g~~~~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gY~~~~~~~ 393 (415)
+++|.||+||++..+++..... .....++|+|+++++++|+| +++.. .++.|+.|||+|+|+++++|||++|+.|
T Consensus 304 ~l~n~YG~TE~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~i~d-~~~~~-~~~~g~~GEl~i~G~~v~~GY~~~p~~t 381 (620)
T 4dg8_A 304 HLVNGYGPTENTTFTCCHVVTDDDLEEDDIPIGKAIAGTAVLLLD-EHGQE-IAEPDRAGEIVAFGAGLAQGYRNDAART 381 (620)
T ss_dssp EEEEEECCGGGCSCSEEEECCTGGGGSSSCCCBEECTTEEEEEEC-TTSCB-CCSSSCCEEEEEEETTCCSEETTCHHHH
T ss_pred EEEeeEchhhhhhheEEEeccccccCCCCCCceecccCcEEEEEC-ccCCC-CCCCCCceEEEEeccccccccCCChhhh
Confidence 9999999999998766543322 22347899999999999999 66653 3456799999999999999999999999
Q ss_pred hhhhcC--------CceecCceEEEcCCCC
Q 014951 394 EEVIVD--------GWFHTGDIGEWQPMEL 415 (415)
Q Consensus 394 ~~~~~~--------g~~~TGDlg~~d~~G~ 415 (415)
.++|.+ +||+|||+|++|+||+
T Consensus 382 ~~~f~~~p~~~~~~~~yrTGDl~~~~~dG~ 411 (620)
T 4dg8_A 382 RASFVELPYRGRLLRAYRTGDRARYDEQGR 411 (620)
T ss_dssp HHHEEEEEETTEEEEEEEEEEEEEECTTSC
T ss_pred hhhhccCCCCCCCceEEeCCCEEEECCCCe
Confidence 999943 7999999999999995
No 21
>3nyq_A Malonyl-COA ligase; A/B topology ababa sandwich beta-barrel adenylate-forming EN fold; HET: MCA AMP; 1.43A {Streptomyces coelicolor} PDB: 3nyr_A*
Probab=100.00 E-value=2e-53 Score=411.58 Aligned_cols=331 Identities=25% Similarity=0.365 Sum_probs=265.3
Q ss_pred CCCCCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEcCCChhhhhhcCccCCCCccE
Q 014951 4 RGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKT 83 (415)
Q Consensus 4 ~Gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~ 83 (415)
.+++.||+|+++++|+++++++++||+++|++++||+|.++.+++.+++++++++++|++.+.... ... .....
T Consensus 63 ~~L~~~~~V~i~~~~~~~~~~~~la~~~~Ga~~vpl~~~~~~~~l~~il~~~~~~~vi~~~~~~~~--~~~----~~~~~ 136 (505)
T 3nyq_A 63 GRIGGAGRVAVWATPAMETGVAVVAALLAGVAAVPLNPKSGDKELAHILSDSAPSLVLAPPDAELP--PAL----GALER 136 (505)
T ss_dssp TTCC---CEEEECCSSHHHHHHHHHHHHHTCCEEEECTTCCHHHHHHHHHHHCCSEEEECTTCCCC--GGG----TTSEE
T ss_pred hhccCCCEEEEEcCCCHHHHHHHHHHHHhCCEEEEcCCCCCHHHHHHHHHHCCCCEEEECCccccc--hhh----ccccc
Confidence 466779999999999999999999999999999999999999999999999999999998752110 000 11111
Q ss_pred EEEecCCCchhhHHhhhcCceeecHHHHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEeecHHHHHHhhhhhhhh
Q 014951 84 IVSFANVSSSQKKEAEELGVSCFSWEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMF 163 (415)
Q Consensus 84 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~~~~~~~ 163 (415)
+.++.. .....+.....++|+++|+|||||||.||+|+++|+++...+......+
T Consensus 137 -~~~~~~------------------------~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~ 191 (505)
T 3nyq_A 137 -VDVDVR------------------------ARGAVPEDGADDGDPALVVYTSGTTGPPKGAVIPRRALATTLDALADAW 191 (505)
T ss_dssp -EECCTT------------------------CCCCCCCCCCCTTSEEEEEEECCSSSSCEEEEEEHHHHHHHHHHHHHHH
T ss_pred -cccccc------------------------cccCCCCCCCCCCCeEEEEeCCCCcCCCCeEEEeHHHHHHHHHHHHHHh
Confidence 111110 0111223445689999999999999999999999999999998877766
Q ss_pred hhccccCCCCCEEEEeCChhhHHHHHH-HHHhhhcCcEEEEeCC-CHHHHHHHHHhhCCeEEEeCcHHHHHHHHHHHHhh
Q 014951 164 VVTGKVCSEEDTYFSFLPLAHIYDQII-ETHCIHKGCSIGFWRG-DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKI 241 (415)
Q Consensus 164 ~~~~~~~~~~d~~l~~~p~~~~~~~~~-~~~~l~~G~~vv~~~~-~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~ 241 (415)
.+.+.|++++.+|++|..++.. ++.++..|+++++.+. ++..+++.+ ++++|+++++|+++..+++.+....
T Consensus 192 -----~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i-~~~~t~~~~~P~~~~~l~~~~~~~~ 265 (505)
T 3nyq_A 192 -----QWTGEDVLVQGLPLFHVHGLVLGILGPLRRGGSVRHLGRFSTEGAAREL-NDGATMLFGVPTMYHRIAETLPADP 265 (505)
T ss_dssp -----TCCTTCEEEECCCTTSHHHHTTTTHHHHHHTCEEEECSSCCHHHHHHHH-TTTCCEEEECHHHHHHHHHHGGGCH
T ss_pred -----CCCCCcEEEEeccHHHHHHHHHHHHHHHhcCCEEEECCCCChHHHHHHH-hhCCeEEEehHHHHHHHHHhhhcCc
Confidence 7789999999999999999875 7888999999998876 899999999 8899999999999998876322110
Q ss_pred hcCChhhHHHHHHHHHhhhhccccCCCCCCccchhhHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHHHhcCCceEEe
Q 014951 242 SSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQG 321 (415)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~~G~~~~~~~~~~~~~~~~~~~~~~ 321 (415)
....++ +++|.+++||+++++++.+++.+.++.++++.
T Consensus 266 ----------------------------------~~~~~l--------~~lr~i~~gg~~l~~~~~~~~~~~~~~~~~~~ 303 (505)
T 3nyq_A 266 ----------------------------------ELAKAL--------AGARLLVSGSAALPVHDHERIAAATGRRVIER 303 (505)
T ss_dssp ----------------------------------HHHHHH--------HHCSEEEECSSCCCHHHHHHHHHHHSCCCEEE
T ss_pred ----------------------------------hhhccc--------ccceEEEECCCCCCHHHHHHHHHhcCCeeecc
Confidence 001111 27999999999999999999999899999999
Q ss_pred eccCCCCceeeeecCCcccccCcccccccCeEEEEeecCCCCCCCC-CCCCCCeEEEecCCccccccCCchhhhhhh-cC
Q 014951 322 YGLTESCSGCFTSLADVFNMIGTVGVPMTTVEARLESVPEMGYDAL-SSVPRGEICLRGNTLFSGYYKRPDLTEEVI-VD 399 (415)
Q Consensus 322 yG~tE~~~~~~~~~~~~~~~~~~~G~~~~g~~~~i~~~~~~~~~~~-~~~~~Gel~v~~~~~~~gY~~~~~~~~~~~-~~ 399 (415)
||+||++..++...... ...+++|+|+++++++|+| +++..++. +.|+.|||+|+|++++.|||++|+.|.++| .+
T Consensus 304 YG~TE~~~~~~~~~~~~-~~~~~vG~p~~~~~~~i~d-~~g~~~~~~~~g~~GEl~v~g~~v~~GY~~~~~~t~~~f~~~ 381 (505)
T 3nyq_A 304 YGMTETLMNTSVRADGE-PRAGTVGVPLPGVELRLVE-EDGTPIAALDGESVGEIQVRGPNLFTEYLNRPDATAAAFTED 381 (505)
T ss_dssp EEETTTEEEEECCTTSC-CCTTCCCEECTTCEEEEC------CCCCCCSCCCEEEEEESTTSCCEETTCHHHHHHTBCTT
T ss_pred cchhhcccccccCCCCC-CCCCCcccCCCCCEEEEEC-CCCCCcccCCCCceEEEEEecCchhhhhCCChhHhhhhhcCC
Confidence 99999987666544333 3448999999999999999 77766554 446899999999999999999999999999 69
Q ss_pred CceecCceEEEcCCCC
Q 014951 400 GWFHTGDIGEWQPMEL 415 (415)
Q Consensus 400 g~~~TGDlg~~d~~G~ 415 (415)
|||+|||+|++|+||+
T Consensus 382 g~y~TGDl~~~~~dG~ 397 (505)
T 3nyq_A 382 GFFRTGDMAVRDPDGY 397 (505)
T ss_dssp SCEEEEEEEEECTTSC
T ss_pred CCCccCCeEEECCCcc
Confidence 9999999999999985
No 22
>1amu_A GRSA, gramicidin synthetase 1; peptide synthetase, adenylate forming; HET: PHE AMP; 1.90A {Brevibacillus brevis} SCOP: e.23.1.1
Probab=100.00 E-value=8e-54 Score=419.38 Aligned_cols=329 Identities=19% Similarity=0.274 Sum_probs=264.1
Q ss_pred CccCCCCCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEcCCChhhhhhcCccCCCC
Q 014951 1 MRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLY 80 (415)
Q Consensus 1 L~~~Gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~ 80 (415)
|+++|+++||+|+++++|++++++++|||+++|++++||++.++.+++.+++++++++++|++.+....+.....
T Consensus 81 L~~~Gv~~gd~V~i~~~n~~e~~~~~lA~~~~Gav~vpl~~~~~~~~l~~il~~~~~~~li~~~~~~~~~~~~~~----- 155 (563)
T 1amu_A 81 FIEKGIGKDTLVGIMMEKSIDLFIGILAVLKAGGAYVPIDIEYPKERIQYILDDSQARMLLTQKHLVHLIHNIQF----- 155 (563)
T ss_dssp HHHTTCCTTCEEEEECCSSHHHHHHHHHHHHTTCEEEECCTTSCHHHHHHHHHHHTCSEEEECGGGHHHHTTSCC-----
T ss_pred HHHcCCCCCCEEEEEeCCCHHHHHHHHHHHHhCCEEEEeCCCCcHHHHHHHHHhcCCCEEEEcCchhhhhhhccc-----
Confidence 456899999999999999999999999999999999999999999999999999999999999876554332211
Q ss_pred ccEEEEecCCCchhhHHhhhcCceeecHHHHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEeecHHHHHHhhhhh
Q 014951 81 LKTIVSFANVSSSQKKEAEELGVSCFSWEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVD 160 (415)
Q Consensus 81 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~~~~ 160 (415)
...+..++... + ..........+..++|+++|+|||||||.||||++||+++.+.+....
T Consensus 156 ~~~~~~~~~~~----------------~----~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~ 215 (563)
T 1amu_A 156 NGQVEIFEEDT----------------I----KIREGTNLHVPSKSTDLAYVIYTSGTTGNPKGTMLEHKGISNLKVFFE 215 (563)
T ss_dssp CSEEEECCCST----------------T----TTSCCSCCCCCCCTTSEEEEEEEC-----CEEEEEESHHHHHHHHHHH
T ss_pred cCceeeecchh----------------h----ccccCccCCCCCCCCCeEEEEECCCCCCCCcEEEEehHHHHHHHHHHH
Confidence 11233322110 0 000111112345678999999999999999999999999998887766
Q ss_pred hhhhhccccCCCCCEEEEeCChhhHHHHHHHHHhhhcCcEEEEeCC----CHHHHHHHHHhhCCeEEEeCcHHHHHHHHH
Q 014951 161 QMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG----DVRYLMEDIQELKPTMFSGVPRVYDRIYTG 236 (415)
Q Consensus 161 ~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~vv~~~~----~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~ 236 (415)
..+ .+.++|++++++|++|..++..++.+++.|+++++.+. ++..+++.|+++++|++.++|+++..+..
T Consensus 216 ~~~-----~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~- 289 (563)
T 1amu_A 216 NSL-----NVTEKDRIGQFASISFDASVWEMFMALLTGASLYIILKDTINDFVKFEQYINQKEITVITLPPTYVVHLDP- 289 (563)
T ss_dssp HTS-----CCCTTCEEEECSCTTSTHHHHHHHHHHTTTCEEEECCHHHHTCHHHHHHHHHHTTCCEEEECHHHHTTSCT-
T ss_pred Hhc-----CCCCCCEEEEeCCccHHHHHHHHHHHHHCCCEEEEcChHhhcCHHHHHHHHHHcCCcEEEeCHHHHHHHHh-
Confidence 555 77899999999999999998878889999999998764 88999999999999999999999876421
Q ss_pred HHHhhhcCChhhHHHHHHHHHhhhhccccCCCCCCccchhhHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHHHhcCC
Q 014951 237 ISNKISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGA 316 (415)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~~G~~~~~~~~~~~~~~~~~ 316 (415)
. ...++|.+++||+++++++.+.+.+ ..
T Consensus 290 ------------------------------------~--------------~~~~lr~~~~gG~~l~~~~~~~~~~--~~ 317 (563)
T 1amu_A 290 ------------------------------------E--------------RILSIQTLITAGSATSPSLVNKWKE--KV 317 (563)
T ss_dssp ------------------------------------T--------------TCCSCSEEEEESSCCCHHHHHHHTT--TS
T ss_pred ------------------------------------c--------------ccccccEEEEEEecCCHHHHHHHHh--CC
Confidence 0 0148999999999999999999876 47
Q ss_pred ceEEeeccCCCCceeeeecCCc--ccccCcccccccCeEEEEeecCCCCCCCCCCCCCCeEEEecCCccccccCCchhhh
Q 014951 317 PLTQGYGLTESCSGCFTSLADV--FNMIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTE 394 (415)
Q Consensus 317 ~~~~~yG~tE~~~~~~~~~~~~--~~~~~~~G~~~~g~~~~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gY~~~~~~~~ 394 (415)
++++.||+||++..++...... .....++|+|+++++++|+| +++.. ++.|+.|||+|+||+++.|||++|+.|.
T Consensus 318 ~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~vG~p~~~~~v~i~d-~~~~~--~~~g~~GEl~v~g~~v~~GY~~~pe~t~ 394 (563)
T 1amu_A 318 TYINAYGPTETTICATTWVATKETIGHSVPIGAPIQNTQIYIVD-ENLQL--KSVGEAGELCIGGEGLARGYWKRPELTS 394 (563)
T ss_dssp EEEEEECCGGGSSCSEEEECCSSCCCSSCCCBEECTTEEEEEEC-TTSCB--CCTTCEEEEEEEETTCCCEETTCHHHHH
T ss_pred eEEEEECcCHHhHhheeeecccccCCCCCcccceeCCCEEEEEC-CCcCC--CCCCCcEEEEEechhhChhhCCCchhhh
Confidence 8999999999987665543322 12347899999999999999 77654 4567999999999999999999999999
Q ss_pred hhhc-------CCceecCceEEEcCCCC
Q 014951 395 EVIV-------DGWFHTGDIGEWQPMEL 415 (415)
Q Consensus 395 ~~~~-------~g~~~TGDlg~~d~~G~ 415 (415)
++|. +|||+|||+|++|+||+
T Consensus 395 ~~f~~~~~~~g~~w~~TGDlg~~d~dG~ 422 (563)
T 1amu_A 395 QKFVDNPFVPGEKLYKTGDQARWLSDGN 422 (563)
T ss_dssp HHEEECSSSTTSEEEEEEEEEEECTTSC
T ss_pred hhcccCCCCCCCEEEecCCEEEEcCCCe
Confidence 9983 35999999999999996
No 23
>3tsy_A Fusion protein 4-coumarate--COA ligase 1, resvera synthase; transferase; 3.10A {Arabidospis thaliana}
Probab=100.00 E-value=2.4e-53 Score=441.69 Aligned_cols=358 Identities=27% Similarity=0.380 Sum_probs=284.4
Q ss_pred CccCCCCCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEcCCChhhhhhcCccCCCC
Q 014951 1 MRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLY 80 (415)
Q Consensus 1 L~~~Gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~ 80 (415)
|+++|+++||+|+|+++|++++++++|||+++|++++||+|.++++++.+++++++++++|++.+..+.+.......
T Consensus 105 L~~~Gv~~gd~V~i~~~ns~e~~v~~lA~~~~Ga~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~--- 181 (979)
T 3tsy_A 105 FHKLGVNQNDVVMLLLPNCPEFVLSFLAASFRGATATAANPFFTPAEIAKQAKASNTKLIITEARYVDKIKPLQNDD--- 181 (979)
T ss_dssp HHHTTCCTTCEEEEECSSCHHHHHHHHHHHHHTCEEEEECTTSCHHHHHHHHHHHTEEEEEECSTTTTTSHHHHHTS---
T ss_pred HHHcCCCCcCEEEEEeCCCHHHHHHHHHHHHcCCEEEeeCCCCCHHHHHHHHHHcCCeEEEEChHHHHHHHHHhhcC---
Confidence 45789999999999999999999999999999999999999999999999999999999999988766555433211
Q ss_pred ccEEEEecCCCchhhHHhhhcCceeecHHHHHhcCCC---CCCCCCCCCCCeEEEEecCCCCCCCceEEeecHHHHHHhh
Q 014951 81 LKTIVSFANVSSSQKKEAEELGVSCFSWEEFLQLGTL---DCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVL 157 (415)
Q Consensus 81 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~ 157 (415)
...++.++..... ........+.++...... ..+.....++|+++|+|||||||.||+|+++|+++...+.
T Consensus 182 ~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~ 255 (979)
T 3tsy_A 182 GVVIVCIDDNESV------PIPEGCLRFTELTQSTTEASEVIDSVEISPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVA 255 (979)
T ss_dssp CCEEEECCCCTTS------CCCTTEEEGGGTSSCCSGGGGGSCCSCCCTTSEEECCBCCCSSSSCCBEEEEHHHHHHHHH
T ss_pred CceEEEeCCcccc------cCCcccccHHHHhhccccccccCCcCCCCccceEEEEeCCCCCCCCeEEEechHHHHHHHH
Confidence 1234444432110 001123444444432211 2233456789999999999999999999999999998876
Q ss_pred hhhhhhhhccccCCCCCEEEEeCChhhHHHHHH-HHHhhhcCcEEEEeCC-CHHHHHHHHHhhCCeEEEeCcHHHHHHHH
Q 014951 158 SVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQII-ETHCIHKGCSIGFWRG-DVRYLMEDIQELKPTMFSGVPRVYDRIYT 235 (415)
Q Consensus 158 ~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~-~~~~l~~G~~vv~~~~-~~~~~~~~i~~~~~t~~~~~P~~~~~l~~ 235 (415)
...... .....+.+.|++++++|++|.+++.. ++.++..|+++++.+. ++..+++.|+++++|++.++|+++..+++
T Consensus 256 ~~~~~~-~~~~~~~~~d~~l~~~p~~h~~~~~~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~ 334 (979)
T 3tsy_A 256 QQVDGE-NPNLYFHSDDVILCVLPMFHIYALNSIMLCGLRVGAAILIMPKFEINLLLELIQRCKVTVAPMVPPIVLAIAK 334 (979)
T ss_dssp HHHCSS-SCSSCCCSSCEEEECSCSSSHHHHHHTHHHHHHHTCEEEECSSCCHHHHHHHHHHHTCCEEEECHHHHHHHHH
T ss_pred HHHHhh-cccccCCCCCEEEEECchHHHHHHHHHHHHHHhcCcEEEEeCCCCHHHHHHHHHHhCCeEEEcHHHHHHHHHh
Confidence 543211 01125778999999999999999975 6788999999999876 99999999999999999999999998865
Q ss_pred HHHHhhhcCChhhHHHHHHHHHhhhhccccCCCCCCccchhhHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHHHhc-
Q 014951 236 GISNKISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTS- 314 (415)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~~G~~~~~~~~~~~~~~~- 314 (415)
... ....++ ++||.+++||+++++++.+++.+.+
T Consensus 335 ~~~-------------------------------------~~~~~l--------~~lr~~~~gg~~l~~~~~~~~~~~~~ 369 (979)
T 3tsy_A 335 SSE-------------------------------------TEKYDL--------SSIRVVKSGAAPLGKELEDAVNAKFP 369 (979)
T ss_dssp CGG-------------------------------------GGTSCC--------TTCCEEEESSCCCCSSHHHHHHHHCT
T ss_pred Ccc-------------------------------------ccCCCc--------cceEEEEEcCCCCCHHHHHHHHHHCC
Confidence 211 011111 4899999999999999999999888
Q ss_pred CCceEEeeccCCCCceeeeecC----CcccccCcccccccCeEEEEeecCCCCCCCCCCCCCCeEEEecCCccccccCCc
Q 014951 315 GAPLTQGYGLTESCSGCFTSLA----DVFNMIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRP 390 (415)
Q Consensus 315 ~~~~~~~yG~tE~~~~~~~~~~----~~~~~~~~~G~~~~g~~~~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gY~~~~ 390 (415)
++++++.||+||++.+++.... ......+++|+|+++++++|+| ++.+ .+++.|+.|||+|+||+++.|||++|
T Consensus 370 ~~~l~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d-~~~~-~~~~~g~~GEl~i~g~~v~~GY~~~p 447 (979)
T 3tsy_A 370 NAKLGQGYGMTEAGPVLAMSLGFAKEPFPVKSGACGTVVRNAEMKIVD-PDTG-DSLSRNQPGEICIRGHQIMKGYLNNP 447 (979)
T ss_dssp TCEEEECEECGGGCSEEEECGGGSSSCCCCCTTCCCEECSSCEEEEEC-TTSC-CBCCTTCCEEEEEESTTSCSEETTCH
T ss_pred CCeEEeeechhhhhHHHHhCCCCCCCccccCCCCcCcccCCcEEEEEe-CCCC-CCCCCCCccEEEEECCCccccccCCh
Confidence 8899999999999987665421 1223458999999999999999 4432 45567799999999999999999999
Q ss_pred hhhhhhh-cCCceecCceEEEcCCCC
Q 014951 391 DLTEEVI-VDGWFHTGDIGEWQPMEL 415 (415)
Q Consensus 391 ~~~~~~~-~~g~~~TGDlg~~d~~G~ 415 (415)
+.|.+.| .+|||+|||+|++|+||+
T Consensus 448 ~~t~~~f~~~g~~~TGDl~~~~~dG~ 473 (979)
T 3tsy_A 448 AATAETIDKDGWLHTGDIGLIDDDDE 473 (979)
T ss_dssp HHHHHHBCTTSCEEEEEEEEECTTSC
T ss_pred hhhhhhccCCCcEEcCCEEEEcCCce
Confidence 9999999 799999999999999985
No 24
>3l8c_A D-alanine--poly(phosphoribitol) ligase subunit 1; structural genomics, DLTA, ATP-binding, cytoplasm, nucleotide-binding; 2.41A {Streptococcus pyogenes serotype M6} PDB: 3lgx_A*
Probab=100.00 E-value=1e-53 Score=416.13 Aligned_cols=337 Identities=18% Similarity=0.186 Sum_probs=267.7
Q ss_pred CccCCCCCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEcCCChhhhhhcCccCCCC
Q 014951 1 MRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLY 80 (415)
Q Consensus 1 L~~~Gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~ 80 (415)
|++.|+++||+|+++++|++++++++|||+++|++++|+++.++.+++.++++.++++++|++.+....+..
T Consensus 46 L~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~~~~~~ii~~~~~~~~~~~-------- 117 (521)
T 3l8c_A 46 IDSLALLAKSPVLVFGAQTYDMLATFVALTKSGHAYIPVDVHSAPERILAIIEIAKPSLIIAIEEFPLTIEG-------- 117 (521)
T ss_dssp HHHTCCCTTCCEEEEECSSHHHHHHHHHHHHTTCCEEEEETTSCHHHHHHHHHHSCCSEEEESSCCCSCCTT--------
T ss_pred HHHcCCCCCCEEEEEeCCCHHHHHHHHHHHHhCCEEEecCccccHHHHHHHHHhCCCCEEEecCcccccccc--------
Confidence 457899999999999999999999999999999999999999999999999999999999998865432211
Q ss_pred ccEEEEecCCCchhhHHhhhcCceeecHHHHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEeecHHHHHHhhhhh
Q 014951 81 LKTIVSFANVSSSQKKEAEELGVSCFSWEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVD 160 (415)
Q Consensus 81 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~~~~ 160 (415)
. .++.+ ..+.................++|+++|+|||||||.||+|++||+++........
T Consensus 118 ~-~~~~~------------------~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~ 178 (521)
T 3l8c_A 118 I-SLVSL------------------SEIESAKLAEMPYERTHSVKGDDNYYIIFTSGTTGQPKGVQISHDNLLSFTNWMI 178 (521)
T ss_dssp S-EEEEH------------------HHHHHHHHHTCCCCCSSCCCTTSEEEEEECCC---CCCEEEEEHHHHHHHHHHHH
T ss_pred C-cccch------------------hhhhhcccccCCcccCCCCCCCCcEEEEEcCCCCCCCCEEEEehHHHHHHHHHHh
Confidence 0 11111 0111111111112233456789999999999999999999999999998776654
Q ss_pred hhhhhccccCCCCCEEEEeCChhhHHHHHHHHHhhhcCcEEEEeCC----CHHHHHHHHHhhCCeEEEeCcHHHHHHHHH
Q 014951 161 QMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG----DVRYLMEDIQELKPTMFSGVPRVYDRIYTG 236 (415)
Q Consensus 161 ~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~vv~~~~----~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~ 236 (415)
... .......+++++..|++|..+....+.++..|+++++.+. ++..+++.++++++|++.++|+++..++..
T Consensus 179 ~~~---~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~ 255 (521)
T 3l8c_A 179 EDA---AFDVPKQPQMLAQPPYSFDLSVMYWAPTLALGGTLFALPKELVADFKQLFTTIAQLPVGIWTSTPSFADMAMLS 255 (521)
T ss_dssp HCT---TTCCCSSCEEECCSCTTSGGGHHHHHHHHHTTCEEEECCGGGTTCHHHHHHHHHHSCCSEEEECHHHHHHHHTS
T ss_pred hcc---ccCCCCCCeEEecCCccHHHHHHHHHHHHhcCCEEEEcCHHHhhCHHHHHHHHHHcCCcEEEeCCCHHHHHhhh
Confidence 431 1266789999999999999988888888999999998764 889999999999999999999999876531
Q ss_pred HHHhhhcCChhhHHHHHHHHHhhhhccccCCCCCCccchhhHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHHHhc-C
Q 014951 237 ISNKISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTS-G 315 (415)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~~G~~~~~~~~~~~~~~~-~ 315 (415)
.. ....+ .+++|.+++||+++++++.+.+.+.+ +
T Consensus 256 ~~-------------------------------------~~~~~--------~~~lr~~~~gG~~l~~~~~~~~~~~~~~ 290 (521)
T 3l8c_A 256 DD-------------------------------------FCQAK--------MPALTHFYFDGEELTVSTARKLFERFPS 290 (521)
T ss_dssp TT-------------------------------------CSTTT--------CTTCCEEEECSSCCCHHHHHHHHHHCTT
T ss_pred hc-------------------------------------ccccc--------CccceEEEEecccCCHHHHHHHHHHCCC
Confidence 00 00000 14899999999999999999998888 8
Q ss_pred CceEEeeccCCCCceeeeecCCcc----cccCcccccccCeEEEEeecCCCCCCCCCCCCCCeEEEecCCccccccCCch
Q 014951 316 APLTQGYGLTESCSGCFTSLADVF----NMIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPD 391 (415)
Q Consensus 316 ~~~~~~yG~tE~~~~~~~~~~~~~----~~~~~~G~~~~g~~~~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gY~~~~~ 391 (415)
.++++.||+||++..++....... ...+++|+|+++++++|+| +++.. ++.|+.|||+|+||+++.|||++|+
T Consensus 291 ~~i~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~vG~p~~~~~~~i~d-~~g~~--~~~g~~GEl~v~g~~v~~GY~~~~~ 367 (521)
T 3l8c_A 291 AKIINAYGPTEATVALSAIEITREMVDNYTRLPIGYPKPDSPTYIID-EDGKE--LSSGEQGEIIVTGPAVSKGYLNNPE 367 (521)
T ss_dssp CEEEEEECCGGGSSCSEEEEECHHHHHHCSSCEEEEECTTSCEEEEC-TTSCB--CCTTCCEEEEEESTTSCSCBTTCHH
T ss_pred ceEEeCcCccHHhhhhceeecccccccCCCccccccccCCCEEEEEC-CCcCC--CCCCCceEEEecccccChhhcCCch
Confidence 899999999999887654432211 1246899999999999999 77654 5567999999999999999999999
Q ss_pred hhhhhh----cCCceecCceEEEcCCCC
Q 014951 392 LTEEVI----VDGWFHTGDIGEWQPMEL 415 (415)
Q Consensus 392 ~~~~~~----~~g~~~TGDlg~~d~~G~ 415 (415)
.|.++| .+|||+|||+|++|+||+
T Consensus 368 ~t~~~f~~~~~~~~~~TGDlg~~d~dG~ 395 (521)
T 3l8c_A 368 KTAEAFFTFKGQPAYHTGDIGSLTEDNI 395 (521)
T ss_dssp HHHHHEEEETTEEEEEEEEEEEECSSSC
T ss_pred HhhccCcCCCCceeeeCCCEEEEeCCCe
Confidence 999998 357999999999999995
No 25
>3fce_A D-alanine--poly(phosphoribitol) ligase subunit 1; DLTA, AMP-forming domain, adenylation, D-alanine protein ligase, ATP complex; HET: ATP; 1.90A {Bacillus cereus} PDB: 3fcc_A* 3dhv_A*
Probab=100.00 E-value=1e-53 Score=415.13 Aligned_cols=334 Identities=19% Similarity=0.203 Sum_probs=267.2
Q ss_pred CccCCCCCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEcCCChhhhhhcCccCCCC
Q 014951 1 MRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLY 80 (415)
Q Consensus 1 L~~~Gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~ 80 (415)
|++.|+++||+|+++++|++++++++|||+++|++++|+++.++.+++.++++.++++++|++........ .
T Consensus 43 L~~~g~~~gd~V~i~~~n~~e~~~~~la~~~~G~v~vpl~~~~~~~~l~~il~~~~~~~~i~~~~~~~~~~--------~ 114 (512)
T 3fce_A 43 ISSEYPDDRSPIMVYGHMQPEMIINFLGCVKAGHAYIPVDLSIPADRVQRIAENSGAKLLLSATAVTVTDL--------P 114 (512)
T ss_dssp HHHHSTTCCCCEEEEESSCHHHHHHHHHHHHTTCCEEEEETTSCHHHHHHHHHHSCCCEEEESSCCCSSCC--------S
T ss_pred HHHhCCCCCCEEEEEeCCCHHHHHHHHHHHHhCCEEEeeCCCCcHHHHHHHHHhcCCCEEEecCccccccc--------c
Confidence 35679999999999999999999999999999999999999999999999999999999999864321100 0
Q ss_pred ccEEEEecCCCchhhHHhhhcCceeecHHHHHhcC--CCCCCCCCCCCCCeEEEEecCCCCCCCceEEeecHHHHHHhhh
Q 014951 81 LKTIVSFANVSSSQKKEAEELGVSCFSWEEFLQLG--TLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLS 158 (415)
Q Consensus 81 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~~ 158 (415)
..++.. ..+.++.... ....+.....++++++|+|||||||.||+|++||+++...+..
T Consensus 115 -~~~~~~------------------~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgv~~th~~l~~~~~~ 175 (512)
T 3fce_A 115 -VRIVSE------------------DNLKDIFFTHKGNTPNPEHAVKGDENFYIIYTSGSTGNPKGVQITYNCLVSFTKW 175 (512)
T ss_dssp -SEEEET------------------HHHHHHHHHTTTCCCCGGGSCCTTSEEEEEEECC----CEEEEEEHHHHHHHHHH
T ss_pred -cceech------------------hhhhhhcccccccCCCccccCCCCCeEEEEECCCCCCCCceEEEehHHHHHHHHH
Confidence 011110 0111221111 1122233557899999999999999999999999999999888
Q ss_pred hhhhhhhccccCCCCCEEEEeCChhhHHHHHHHHHhhhcCcEEEEeCC----CHHHHHHHHHhhCCeEEEeCcHHHHHHH
Q 014951 159 VDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG----DVRYLMEDIQELKPTMFSGVPRVYDRIY 234 (415)
Q Consensus 159 ~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~vv~~~~----~~~~~~~~i~~~~~t~~~~~P~~~~~l~ 234 (415)
....+ .+.++|++++++|++|.+++..++.+++.|+++++.+. ++..+++.++++++|++.++|+++..++
T Consensus 176 ~~~~~-----~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~ 250 (512)
T 3fce_A 176 AVEDF-----NLQTGQVFLNQAPFSFDLSVMDIYPSLVTGGTLWAIDKDMIARPKDLFASLEQSDIQVWTSTPSFAEMCL 250 (512)
T ss_dssp HHHHT-----TCCSSCEEEECSCTTSGGGHHHHHHHHHTTCEEEECCHHHHHSHHHHHHHHHHHCCCEEEECHHHHHHHT
T ss_pred HHHhc-----CCCCCCEEEEeCCccHhHHHHHHHHHHhCCCEEEECCHHHhhCHHHHHHHHHHcCCcEEEecHHHHHHHH
Confidence 76666 77899999999999999998888899999999999874 8999999999999999999999998874
Q ss_pred HHHHHhhhcCChhhHHHHHHHHHhhhhccccCCCCCCccchhhHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHHHhc
Q 014951 235 TGISNKISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTS 314 (415)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~~G~~~~~~~~~~~~~~~ 314 (415)
... .....+ .+++|.+++||+++++++.+++.+.+
T Consensus 251 ~~~-------------------------------------~~~~~~--------~~~lr~~~~~G~~l~~~~~~~~~~~~ 285 (512)
T 3fce_A 251 MEA-------------------------------------SFSESM--------LPNMKTFLFCGEVLPNEVARKLIERF 285 (512)
T ss_dssp TST-------------------------------------TCSTTT--------STTCCEEEECSSCCCHHHHHHHHHHC
T ss_pred hhc-------------------------------------cccchh--------CccccEEEEecCcCCHHHHHHHHHHC
Confidence 310 000001 14899999999999999999999888
Q ss_pred -CCceEEeeccCCCCceeeeecCCcc----cccCcccccccCeEEEEeecCCCCCCCCCCCCCCeEEEecCCccccccCC
Q 014951 315 -GAPLTQGYGLTESCSGCFTSLADVF----NMIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKR 389 (415)
Q Consensus 315 -~~~~~~~yG~tE~~~~~~~~~~~~~----~~~~~~G~~~~g~~~~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gY~~~ 389 (415)
+.++++.||+||++..++....... ....++|+|.++++++|+| +++.. ++.|+.|||+|+||+++.|||++
T Consensus 286 ~~~~i~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d-~~g~~--~~~g~~GEl~v~g~~v~~GY~~~ 362 (512)
T 3fce_A 286 PKATIMNTYGPTEATVAVTGIHVTEEVLDQYKSLPVGYCKSDCRLLIMK-EDGTI--APDGEKGEIVIVGPSVSVGYLGS 362 (512)
T ss_dssp TTCEEEEEECCGGGSSCSEEEECCHHHHHHCSSCCCEEECTTCEEEEEC-SSSCB--CCTTSCEEEEEESTTSCSCBTTC
T ss_pred CCCEEEeCcccChhhhheeeEEeccccccccCCCccccccCCcEEEEEC-CCCCC--CCCCCeEEEEEeccccChhhcCC
Confidence 7899999999999887665443321 1347899999999999999 77654 45679999999999999999999
Q ss_pred chhhhhhhc----CCceecCceEEEcCCCC
Q 014951 390 PDLTEEVIV----DGWFHTGDIGEWQPMEL 415 (415)
Q Consensus 390 ~~~~~~~~~----~g~~~TGDlg~~d~~G~ 415 (415)
|+.|.++|. +|||+|||+|++ +||+
T Consensus 363 ~~~t~~~f~~~~~~~~~~TGDlg~~-~dG~ 391 (512)
T 3fce_A 363 PELTEKAFTMIDGERAYKTGDAGYV-ENGL 391 (512)
T ss_dssp HHHHHHHEEEETTEEEEEEEEEEEE-ETTE
T ss_pred chhhhhccccCCCCEEEeCCceEEe-cCCE
Confidence 999999983 569999999999 6774
No 26
>3e7w_A D-alanine--poly(phosphoribitol) ligase subunit 1; DLTA, non-ribosomal peptide synthetase, NRPS, adenylation domain, D-alanylation; HET: AMP; 2.28A {Bacillus subtilis} PDB: 3e7x_A*
Probab=100.00 E-value=8.3e-53 Score=408.49 Aligned_cols=330 Identities=18% Similarity=0.225 Sum_probs=269.9
Q ss_pred CCCCCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEcCCChhhhhhcCccCCCCccE
Q 014951 4 RGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKT 83 (415)
Q Consensus 4 ~Gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~ 83 (415)
.|+++||+|+++++|++++++++|||+++|++++|+++.++.+++.+++++++++++|++........ ..
T Consensus 47 ~~~~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~---~~------- 116 (511)
T 3e7w_A 47 ISGEKKSPILVYGHMEPHMIVSFLGSVKAGHPYIPVDLSIPSERIAKIIESSGAELLIHAAGLSIDAV---GQ------- 116 (511)
T ss_dssp SCSSSCCCEEEEESSCHHHHHHHHHHHHHTCCEEEEETTSCHHHHHHHHHHHTCCEEEESSSCCTTCC---CC-------
T ss_pred cCCCCCCeEEEEecCCHHHHHHHHHHHHhCCEEEecCCCChHHHHHHHHHhCCCCEEEecccccchhc---cc-------
Confidence 48889999999999999999999999999999999999999999999999999999999765322110 00
Q ss_pred EEEecCCCchhhHHhhhcCceeecHHHHHhcC-CCCCCCCCCCCCCeEEEEecCCCCCCCceEEeecHHHHHHhhhhhhh
Q 014951 84 IVSFANVSSSQKKEAEELGVSCFSWEEFLQLG-TLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQM 162 (415)
Q Consensus 84 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~~~~~~ 162 (415)
......++++.... ..........++++++|+|||||||.||+|++||+++...+......
T Consensus 117 ------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~ 178 (511)
T 3e7w_A 117 ------------------QIQTVSAEELLENEGGSVSQDQWVKEHETFYIIYTSGSTGNPKGVQISAANLQSFTDWICAD 178 (511)
T ss_dssp ------------------SSCEEEHHHHHTSCSCCCCGGGSCCTTSEEEEEEECCTTSSCEEEEEEHHHHHHHHHHHHHH
T ss_pred ------------------ccceecHhhhhccccCCccccccCCCCCeEEEEECCCCCCCCCEEEEcHHHHHHHHHHHHHh
Confidence 01123344444332 11222234567899999999999999999999999999998887666
Q ss_pred hhhccccCCCCCEEEEeCChhhHHHHHHHHHhhhcCcEEEEeCC----CHHHHHHHHHhhCCeEEEeCcHHHHHHHHHHH
Q 014951 163 FVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG----DVRYLMEDIQELKPTMFSGVPRVYDRIYTGIS 238 (415)
Q Consensus 163 ~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~vv~~~~----~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~ 238 (415)
+ .+..+|++++++|++|.+++..++.+++.|+++++.+. ++..+++.++++++|++.++|+++..+++..
T Consensus 179 ~-----~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~- 252 (511)
T 3e7w_A 179 F-----PVSGGKIFLNQAPFSFDLSVMDLYPCLQSGGTLHCVTKDAVNKPKVLFEELKKSGLNVWTSTPSFVQMCLMDP- 252 (511)
T ss_dssp S-----TTTTTCEEEECSCTTSTHHHHHHHHHHHTTCEEEECCHHHHHSHHHHHHHHHHHCCSEEEECHHHHHHHHTST-
T ss_pred c-----CCCccceEEEeCCccHHHHHHHHHHHHhcCCEEEEcChhhhcCHHHHHHHHHHcCCcEEEecHHHHHHHHhcc-
Confidence 6 77899999999999999998888899999999999864 8999999999999999999999998875410
Q ss_pred HhhhcCChhhHHHHHHHHHhhhhccccCCCCCCccchhhHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHHHhc-CCc
Q 014951 239 NKISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTS-GAP 317 (415)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~~G~~~~~~~~~~~~~~~-~~~ 317 (415)
..... ..+++|.+++||+++++++.+++.+.+ +.+
T Consensus 253 ------------------------------------~~~~~--------~~~~l~~~~~~G~~l~~~~~~~~~~~~~~~~ 288 (511)
T 3e7w_A 253 ------------------------------------GFSQD--------LLPHADTFMFCGEVLPVSVAKALLERFPKAK 288 (511)
T ss_dssp ------------------------------------TCSTT--------TCTTCCEEEECSSCCCHHHHHHHHHHCTTCE
T ss_pred ------------------------------------ccccc--------cCCcccEEEEecCCCCHHHHHHHHHHCCCcE
Confidence 00000 114899999999999999999999988 789
Q ss_pred eEEeeccCCCCceeeeecCCc----ccccCcccccccCeEEEEeecCCCCCCCCCCCCCCeEEEecCCccccccCCchhh
Q 014951 318 LTQGYGLTESCSGCFTSLADV----FNMIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLT 393 (415)
Q Consensus 318 ~~~~yG~tE~~~~~~~~~~~~----~~~~~~~G~~~~g~~~~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gY~~~~~~~ 393 (415)
+++.||+||++..++...... .....++|+|+++++++|+| +++. +++.|+.|||+|+||+++.|||++|+.|
T Consensus 289 i~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d-~~g~--~~~~g~~GEl~v~g~~v~~GY~~~~~~t 365 (511)
T 3e7w_A 289 IFNTYGPTEATVAVTSVEITNDVISRSESLPVGFAKPDMNIFIMD-EEGQ--PLPEGEKGEIVIAGPSVSRGYLGEPELT 365 (511)
T ss_dssp EEECCCCGGGSSCSEEEEECHHHHTTCSSCCCBEECTTCEEEEEC-TTSC--BCCTTCCEEEEEESTTSCCCBTTCHHHH
T ss_pred EEeCcccchheeeeeEEeccccccccCCcCCCcceeCCCEEEEEC-CCCC--CCCCCCceEEEEecCccChhhCCCcccc
Confidence 999999999987765443221 12236799999999999999 7765 4556799999999999999999999999
Q ss_pred hhhh--cCC--ceecCceEEEcCCCC
Q 014951 394 EEVI--VDG--WFHTGDIGEWQPMEL 415 (415)
Q Consensus 394 ~~~~--~~g--~~~TGDlg~~d~~G~ 415 (415)
.++| .+| ||+|||+|+++ ||+
T Consensus 366 ~~~f~~~~g~~~~~TGDlg~~~-dG~ 390 (511)
T 3e7w_A 366 EKAFFSHEGQWAYRTGDAGFIQ-DGQ 390 (511)
T ss_dssp HHHEEESSSSEEEEEEEEEEEE-TTE
T ss_pred hhhhcCCCCCEEEeCCCeEEcc-CCe
Confidence 9998 344 89999999994 774
No 27
>3kxw_A Saframycin MX1 synthetase B; fatty acid AMP ligase, SGX, acyl adenylate, structural genom 2, protein structure initiative; HET: 1ZZ; 1.85A {Legionella pneumophila subsp} PDB: 3lnv_A*
Probab=100.00 E-value=6e-53 Score=417.17 Aligned_cols=344 Identities=19% Similarity=0.253 Sum_probs=268.9
Q ss_pred CccCCCCCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCCCC---CHHHHHHHHHhcCceEEEEcCCChhhhhhcCccC
Q 014951 1 MRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTL---GANAVEFIINHAEVSIAFVQENKIPSILSCLPRC 77 (415)
Q Consensus 1 L~~~Gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~~~---~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~ 77 (415)
|+++|+++||+|+++++|++++++++|||+++|++++||+|.. +.+++.++++.++++++|++.+....+.......
T Consensus 57 L~~~gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~vpl~~~~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~ 136 (590)
T 3kxw_A 57 LQAEGAKPGDRVLLLFAPGLPLIQAFLGCLYAGCIAVPIYPPAQEKLLDKAQRIVTNSKPVIVLMIADHIKKFTADELNT 136 (590)
T ss_dssp HHHTTCCTTCEEEEECCSSHHHHHHHHHHHHTTCEEEEECCCCSHHHHHHHHHHHHHHCCSEEEECHHHHHHHCC-----
T ss_pred HHHcCCCCCCEEEEEcCCchhHHHHHHHHHHhCcEEEEecCCCchHHHHHHHHHHHhCCCCEEEeCHHHHHHHHHhhhhh
Confidence 4578999999999999999999999999999999999999988 4578999999999999999887655543322111
Q ss_pred CCCccEEEEecCCCchhhHHhhhcCceeecHHHHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEeecHHHHHHhh
Q 014951 78 CLYLKTIVSFANVSSSQKKEAEELGVSCFSWEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVL 157 (415)
Q Consensus 78 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~ 157 (415)
.+....+... ..+++..............++|+++|+|||||||.||||++||+++...+.
T Consensus 137 ~~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~th~~l~~~~~ 197 (590)
T 3kxw_A 137 NPKFLKIPAI-------------------ALESIELNRSSSWQPTSIKSNDIAFLQYTSGSTMHPKGVMVSHHNLLDNLN 197 (590)
T ss_dssp CCEETTEEEE-------------------EGGGCCGGGGGGCCCCCCCTTSEEEEEECSSCSSSCCEEEEEHHHHHHHHH
T ss_pred ccccccccee-------------------echhccccccccCCCCCCCCCCeEEEEeCcCCCCCceEEEeeHHHHHHHHH
Confidence 1111111111 111111111112233456789999999999999999999999999999998
Q ss_pred hhhhhhhhccccCCCCCEEEEeCChhhHHHHHH-HHHhhhcCcEEEEeCC-----CHHHHHHHHHhhCCeEEEeCcHHHH
Q 014951 158 SVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQII-ETHCIHKGCSIGFWRG-----DVRYLMEDIQELKPTMFSGVPRVYD 231 (415)
Q Consensus 158 ~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~-~~~~l~~G~~vv~~~~-----~~~~~~~~i~~~~~t~~~~~P~~~~ 231 (415)
.....+ .+.++|++++++|++|.+++.. ++.+++.|+++++.+. ++..+++.|+++++|++.++|.++.
T Consensus 198 ~~~~~~-----~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~ 272 (590)
T 3kxw_A 198 KIFTSF-----HMNDETIIFSWLPPHHDMGLIGCILTPIYGGIQAIMMSPFSFLQNPLSWLKHITKYKATISGSPNFAYD 272 (590)
T ss_dssp HHHHHT-----TCCTTCEEEECSCTTSHHHHHTTTHHHHHHTCEEEECCHHHHHHCTHHHHHHHHHHTCSEEEECTHHHH
T ss_pred HHHHhh-----CCCCcCeEEEecCCCcchhhHHHHHHHHhcCceEEEeCHHHHHHCHHHHHHHHHHhCCeeecCChhHHH
Confidence 877766 7889999999999999999986 7888999999999864 7899999999999999999999998
Q ss_pred HHHHHHHHhhhcCChhhHHHHHHHHHhhhhccccCCCCCCccchhhHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHH
Q 014951 232 RIYTGISNKISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLR 311 (415)
Q Consensus 232 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~~G~~~~~~~~~~~~ 311 (415)
.+++.+.... ....++ +++|.+++||+++++++.+++.
T Consensus 273 ~l~~~~~~~~----------------------------------~~~~~l--------~~lr~~~~gg~~l~~~~~~~~~ 310 (590)
T 3kxw_A 273 YCVKRIREEK----------------------------------KEGLDL--------SSWVTAFNGAEPVREETMEHFY 310 (590)
T ss_dssp HHHHHCCGGG----------------------------------GTTCCC--------TTCCEEEECSSCCCHHHHHHHH
T ss_pred HHHHHhhhhh----------------------------------ccCCCc--------hhhHHHhhCCCCCCHHHHHHHH
Confidence 8866322111 000111 4899999999999999999999
Q ss_pred HhcC------CceEEeeccCCCCceeeeecCC--------------------------cccccCcccccccCeEEEEeec
Q 014951 312 VTSG------APLTQGYGLTESCSGCFTSLAD--------------------------VFNMIGTVGVPMTTVEARLESV 359 (415)
Q Consensus 312 ~~~~------~~~~~~yG~tE~~~~~~~~~~~--------------------------~~~~~~~~G~~~~g~~~~i~~~ 359 (415)
+.++ .++++.||+||++..++..... .....+++|+|+++ ++|+|
T Consensus 311 ~~~~~~g~~~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~p~~~--v~i~d- 387 (590)
T 3kxw_A 311 QAFKEFGFRKEAFYPCYGLAEATLLVTGGTPGSSYKTLTLAKEQFQDHRVHFADDNSPGSYKLVSSGNPIQE--VKIID- 387 (590)
T ss_dssp HHHGGGTCCGGGEEEEEECGGGSSEEEECCTTSCCCEEEECSCCCSSSBCCBCCTTCTTCEEEECCCEESSE--EEEEC-
T ss_pred HHHHHcCCCccccccccccccccceeecccCCCCceeeeecHHHHhcCceeeccCCCCCcceEeccCCCCCC--eEEEc-
Confidence 8873 4799999999999877654321 11234788999998 78888
Q ss_pred CCCCCCCCCCCCCCeEEEecCCccccccCCchhhhhhhcC-------C--ceecCceEEEcCCCC
Q 014951 360 PEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVIVD-------G--WFHTGDIGEWQPMEL 415 (415)
Q Consensus 360 ~~~~~~~~~~~~~Gel~v~~~~~~~gY~~~~~~~~~~~~~-------g--~~~TGDlg~~d~~G~ 415 (415)
++++ .+++.|+.|||+|+||+++.|||++|+.|.++|.+ | ||+|||+|++| ||+
T Consensus 388 ~~~~-~~~~~g~~GEl~v~g~~v~~GY~~~p~~t~~~f~~~~~~~~~g~~~~~TGDlg~~d-dG~ 450 (590)
T 3kxw_A 388 PDTL-IPCDFDQVGEIWVQSNSVAKGYWNQPEETRHAFAGKIKDDERSAIYLRTGDLGFLH-ENE 450 (590)
T ss_dssp TTTC-CBCCTTBCEEEEEESTTSCCCBTTCHHHHHHHHCBCCTTC---CCBEEEEEEEEEE-TTE
T ss_pred CCCC-cCCCCCCEEEEEEeCCcccccccCChhHHHHHHhccccCCCCCCcEEecCcEEEEE-CCE
Confidence 5532 55667799999999999999999999999999943 5 99999999999 774
No 28
>3ite_A SIDN siderophore synthetase; ligase, non-ribosomal peptide synthesis, NRPS, sidna3, fungal, endophyte; HET: MSE; 2.00A {Neotyphodium lolii}
Probab=100.00 E-value=2.8e-52 Score=409.59 Aligned_cols=341 Identities=18% Similarity=0.178 Sum_probs=268.8
Q ss_pred CccCCCCCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEcCCChhhhhhcCccCCCC
Q 014951 1 MRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLY 80 (415)
Q Consensus 1 L~~~Gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~ 80 (415)
|++.|+ +||+|+++++|++++++++|||+++|++++||++.++.+++.+++++++++++|++++....+.. ..
T Consensus 72 L~~~g~-~gd~V~i~~~n~~~~~~~~lA~~~~Gav~vpl~~~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~------~~ 144 (562)
T 3ite_A 72 IIHASL-HGRAIAVSLDRSLIAFAIIVGIMKSGNTYVPIEAGLPNDRKSFLLRDSRAAMAFVCDNNFDGVEL------PP 144 (562)
T ss_dssp HHHTTC-SSCEEEEECCSCHHHHHHHHHHHHTTCEEEECCTTSCHHHHHHHHHHHTCSEEEECTTTTTTCCC------CT
T ss_pred HHhcCC-CCCEEEEEeCCCHHHHHHHHHHHHhCCEEEecCCcCHHHHHHHHHHhcCCCEEEEcccccccccc------Cc
Confidence 356788 79999999999999999999999999999999999999999999999999999998765433210 11
Q ss_pred ccEEEEecCCCchhhHHhhhcCceeecHHHHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEeecHHHHHHhhhhh
Q 014951 81 LKTIVSFANVSSSQKKEAEELGVSCFSWEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVD 160 (415)
Q Consensus 81 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~~~~ 160 (415)
...++.... ..+.+...............++++++|+|||||||.||+|++||+++......+.
T Consensus 145 ~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~ 208 (562)
T 3ite_A 145 ETKVLDTKN----------------QSFIENLSTQDTSDILNNYPENLDAYLLYTSGSTGTPKGVRVSRHNLSSFSDAWG 208 (562)
T ss_dssp TCEEEETTC----------------HHHHHHHHHSCCSCCCCCCCTTSEEEEEEECC---CCEEEEEEHHHHHHHHHHHH
T ss_pred cceeecccc----------------hhhhhhcccccccccccCCCCCCcEEEEECCCCCCCCcEEEECchhHHHHHHHHH
Confidence 112222111 1122222222222223445678899999999999999999999999998877654
Q ss_pred hhhh---hccccCCCCCEEEEeCChhhHHHHHHHHHhhhcCcEEEEeCC--CHHHHHHHHHhhCCeEEEeCcHHHHHHHH
Q 014951 161 QMFV---VTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTMFSGVPRVYDRIYT 235 (415)
Q Consensus 161 ~~~~---~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~vv~~~~--~~~~~~~~i~~~~~t~~~~~P~~~~~l~~ 235 (415)
..+. .....+...+++++..|++|..++..++.++..|+++++.+. .+..+++.++++++|++.++|++++.+..
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~l~~~~~ 288 (562)
T 3ite_A 209 KLIGNVAPKSLELGGVGKFLCLASRAFDVHIGEMFLAWRFGLCAVTGERLSMLDDLPRTFRELGVTHAGIVPSLLDQTGL 288 (562)
T ss_dssp HHHHHHCGGGGGCTTTCEEECCSCTTSTHHHHHHHHHHHTTCEEEECCHHHHHHSHHHHHHHTTCCEEEECHHHHHHHTC
T ss_pred hhhccccchhcccCcCceEEEecCchhhhhHHHHHHHHhcccEEEecchhhCHHHHHHHHHHcCCCEEEcCHHHHhhccc
Confidence 4321 112356788999999999999888888889999999988765 46788999999999999999998876421
Q ss_pred HHHHhhhcCChhhHHHHHHHHHhhhhccccCCCCCCccchhhHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHHHhcC
Q 014951 236 GISNKISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSG 315 (415)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~~G~~~~~~~~~~~~~~~~ 315 (415)
...+ .+++|.+++||+++++++.+++.+.++
T Consensus 289 -----------------------------------------~~~~--------~~~lr~~~~gG~~l~~~~~~~~~~~~~ 319 (562)
T 3ite_A 289 -----------------------------------------VPED--------APHLVYLGVGGEKMTPRTQQIWSSSDR 319 (562)
T ss_dssp -----------------------------------------CGGG--------STTCCEEEEESSCCCHHHHHHHTTCSS
T ss_pred -----------------------------------------Cccc--------cCceEEEEEecCCCCHHHHHHHhhCCC
Confidence 0001 148999999999999999999998889
Q ss_pred CceEEeeccCCCCceeeeecCCcccccCcccccccCeEEEEeecCCCCCCCCCCCCCCeEEEecCCccccccCCchhhhh
Q 014951 316 APLTQGYGLTESCSGCFTSLADVFNMIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEE 395 (415)
Q Consensus 316 ~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~G~~~~g~~~~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gY~~~~~~~~~ 395 (415)
+++++.||+||++..++..........+++|+|+++++++|+| ++++ .+++.|+.|||+|+||+++.|||++|+.+..
T Consensus 320 ~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d-~~~~-~~~~~g~~GEl~v~g~~v~~GY~~~p~~t~~ 397 (562)
T 3ite_A 320 VALVNVYGPTEVTIGCSAGRILPDSDTRCIGHPLGDSVAHVLA-PGSN-EHVKKGMAGELVIEGSLVANGYLNRPDAKGF 397 (562)
T ss_dssp CEEEEEECCGGGCSCSEEEECCTTSCTTEEEEECTTCEEEEEC-TTSS-CBCCTTSCEEEEEESTTSCCEESSCTTCCSE
T ss_pred cEEEEeeccchheeeeeeeeecCCCCCccccccCCCCeEEEEe-CCCC-CCCCCCCceEEEEeccccchhhCCCcccccc
Confidence 9999999999998877665554444558899999999999999 5443 4566779999999999999999999999887
Q ss_pred hhcCC--ceecCceEEEcCCCC
Q 014951 396 VIVDG--WFHTGDIGEWQPMEL 415 (415)
Q Consensus 396 ~~~~g--~~~TGDlg~~d~~G~ 415 (415)
.+.+| ||+|||+|++|+||+
T Consensus 398 ~~~~g~~w~~TGDlg~~d~dG~ 419 (562)
T 3ite_A 398 CDINGRKMYRTGDIVRMDADSS 419 (562)
T ss_dssp EEETTEEEEEEEEEEEECTTSC
T ss_pred ccCCCCEEEecCCEEEEcCCCe
Confidence 77666 999999999999996
No 29
>3ipl_A 2-succinylbenzoate--COA ligase; structural genomics, acyl-protein synthetase, PSI-2, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=100.00 E-value=1.8e-52 Score=405.56 Aligned_cols=340 Identities=22% Similarity=0.314 Sum_probs=263.2
Q ss_pred CCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEcCCChhhhhhcCccCCCCccEEEEe
Q 014951 8 PGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSF 87 (415)
Q Consensus 8 ~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~v~~~ 87 (415)
+||+|+++++|+++++++++||+++|++++|+++.++.+++.+++++++++++|++.+........... .....+...
T Consensus 47 ~gd~V~i~~~n~~e~~~~~lA~~~~Gav~vpl~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~--~~~~~~~~~ 124 (501)
T 3ipl_A 47 QQSRVGLYIDNSIQSIILIHACWLANIEIAMINTRLTPNEMTNQMRSIDVQLIFCTLPLELRGFQIVSL--DDIEFAGRD 124 (501)
T ss_dssp CCSEEEEECCSSHHHHHHHHHHHHTTCEEEECCTTSCHHHHHHHHHHTTCCEEEESSCCCCTTSEEEET--TC-------
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEecCccCCHHHHHHHHHhcCCCEEEEcccccccccccccc--ccceeeeee
Confidence 899999999999999999999999999999999999999999999999999999998765443221110 111111100
Q ss_pred cCCCchhhHHhhhcCceee-cHHHHHhcC-CCCCCCCCCCCCCeEEEEecCCCCCCCceEEeecHHHHHHhhhhhhhhhh
Q 014951 88 ANVSSSQKKEAEELGVSCF-SWEEFLQLG-TLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVV 165 (415)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~~~~~~~~~ 165 (415)
....... ......... ..+...... ..........++|+++|+|||||||.||+|++||+++...+......+
T Consensus 125 ~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgv~~th~~~~~~~~~~~~~~-- 199 (501)
T 3ipl_A 125 ITTNGLL---DNTMGIQYDTSNETVVPKESPSNILNTSFNLDDIASIMFTSGTTGPQKAVPQTFRNHYASAIGCKESL-- 199 (501)
T ss_dssp ----------------------------CCHHHHTCCCCCTTSEEEEEECCTTTSCCCEEEEEHHHHHHHHHHHHHHT--
T ss_pred ccccccc---ccccccccccchhhccccCCcccccccCCCCCCeEEEEECCCCCCCCcEEEEeHHHHHHHHHHHHHhh--
Confidence 0000000 000000000 001111111 011123345789999999999999999999999999999988876666
Q ss_pred ccccCCCCCEEEEeCChhhHHHHHHHHHhhhcCcEEEEeCC-CHHHHHHHHHhhCCeEEEeCcHHHHHHHHHHHHhhhcC
Q 014951 166 TGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG-DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSG 244 (415)
Q Consensus 166 ~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~vv~~~~-~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~ 244 (415)
.+.++|++++++|++|.+++..++.+++.|+++++.+. ++..+++.|+++++|++.++|+++..+++....
T Consensus 200 ---~~~~~d~~l~~~p~~~~~g~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~----- 271 (501)
T 3ipl_A 200 ---GFDRDTNWLSVLPIYHISGLSVLLRAVIEGFTVRIVDKFNAEQILTMIKNERITHISLVPQTLNWLMQQGLH----- 271 (501)
T ss_dssp ---CCCTTCEEEECSCTTSHHHHHHHHHHHHHTCEEEECSSCCHHHHHHHHHHSCCCEEEECHHHHHHHHHHTCC-----
T ss_pred ---CCCccCEEEEeCcHHHHHHHHHHHHHHHcCceEEeCCCCCHHHHHHHHHHcCCcEEEchHHHHHHHHhcCCC-----
Confidence 77899999999999999999888889999999999876 999999999999999999999999988652100
Q ss_pred ChhhHHHHHHHHHhhhhccccCCCCCCccchhhHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHHHhcCCceEEeecc
Q 014951 245 GALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQGYGL 324 (415)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~~G~~~~~~~~~~~~~~~~~~~~~~yG~ 324 (415)
. ..++|.+++||+++++++.+++.+ +++++++.||+
T Consensus 272 --------------------------------~-----------~~~lr~i~~gG~~l~~~~~~~~~~-~~~~~~~~YG~ 307 (501)
T 3ipl_A 272 --------------------------------E-----------PYNLQKILLGGAKLSATMIETALQ-YNLPIYNSFGM 307 (501)
T ss_dssp --------------------------------S-----------CTTCCEEEECSSCCCHHHHHHHHH-TTCCEEEEEEE
T ss_pred --------------------------------C-----------cCcccEEEEeCCCCCHHHHHHHHH-hCCCEeccccc
Confidence 0 026999999999999999999987 69999999999
Q ss_pred CCCCceeeeecCCc-ccccCcccccccCeEEEEeecCCCCCCCCCCCCCCeEEEecCCccccccCCchhhhhhhcCCcee
Q 014951 325 TESCSGCFTSLADV-FNMIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVIVDGWFH 403 (415)
Q Consensus 325 tE~~~~~~~~~~~~-~~~~~~~G~~~~g~~~~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gY~~~~~~~~~~~~~g~~~ 403 (415)
||++..+....... ....+++|+|+++++++|+| ++ .++.|||+|+|+.++.|||++++.+.. |.+|||+
T Consensus 308 TE~~~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d-~~-------~~~~GEl~v~g~~~~~gY~~~~~~t~~-~~~g~~~ 378 (501)
T 3ipl_A 308 TETCSQFLTATPEMLHARPDTVGMPSANVDVKIKN-PN-------KEGHGELMIKGANVMNGYLYPTDLTGT-FENGYFN 378 (501)
T ss_dssp GGGTEEEEEECHHHHHHCTTCCBEECTTCEEEEES-CC-------SSCCEEEEEESTTSCSCCSBSTTCCCS-EETTEEE
T ss_pred cccccceeecCccccccCCCCCCCCCCCcEEEEec-CC-------CCCccEEEEeccchhhhhCcChhhcch-hcCCcee
Confidence 99987655443322 23458999999999999999 44 236899999999999999999999887 8899999
Q ss_pred cCceEEEcCCCC
Q 014951 404 TGDIGEWQPMEL 415 (415)
Q Consensus 404 TGDlg~~d~~G~ 415 (415)
|||+|++|+||+
T Consensus 379 TGDl~~~~~~G~ 390 (501)
T 3ipl_A 379 TGDIAEIDHEGY 390 (501)
T ss_dssp EEEEEEECTTSC
T ss_pred cCCEEEEcCCCe
Confidence 999999999985
No 30
>3gqw_A Fatty acid AMP ligase; FAAL, E. coli, ATP-dependent binding enzyme family,, structural genomics, PSI-2, protein structure initiative; HET: ZZ9; 3.00A {Escherichia coli O6} PDB: 3pbk_A*
Probab=100.00 E-value=2.3e-52 Score=412.09 Aligned_cols=342 Identities=20% Similarity=0.277 Sum_probs=272.1
Q ss_pred CccCCCCCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCCCCC-------HHHHHHHHHhcCceEEEEcCCChhhhhhc
Q 014951 1 MRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLG-------ANAVEFIINHAEVSIAFVQENKIPSILSC 73 (415)
Q Consensus 1 L~~~Gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~-------~~~l~~~l~~~~~~~ii~~~~~~~~~~~~ 73 (415)
|+++|+++||+|+++++|+++++++++||+++|++++|+++.++ .+++.++++.++++++|++.+....+...
T Consensus 66 L~~~Gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~vpl~~~~~~~~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~ 145 (576)
T 3gqw_A 66 LLSLNLKKGDRVALIAETSSEFVEAFFACQYAGLVAVPLAIPMGVGQRDSWSAKLQGLLASCQPAAIITGDEWLPLVNAA 145 (576)
T ss_dssp HHHTCCCTTCEEEEECCSSHHHHHHHHHHHHTTCEEEEECCCSSSSSHHHHHHHHHHHHHHHCCSEEEECGGGHHHHHHH
T ss_pred HHHcCCCCCCEEEEEcCCcHHHHHHHHHHHHhCCeEeecCCCCcccchhhHHHHHHHHHHhcCCCEEEecHHHHHHHHHh
Confidence 45789999999999999999999999999999999999999999 89999999999999999998876665443
Q ss_pred CccCCCCccEEEEecCCCchhhHHhhhcCceeecHHHHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEeecHHHH
Q 014951 74 LPRCCLYLKTIVSFANVSSSQKKEAEELGVSCFSWEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIV 153 (415)
Q Consensus 74 ~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~th~~l~ 153 (415)
.... +.. .+ ....................++++++|+|||||||.||+|+++|+++.
T Consensus 146 ~~~~-~~~-~~---------------------~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~~~ 202 (576)
T 3gqw_A 146 THDN-PEL-HV---------------------LSHAWFKALPEADVALQRPVPNDIAYLQYTSGSTRFPRGVIITHREVM 202 (576)
T ss_dssp GGGC-TTC-EE---------------------EEHHHHHTSCCCCCCCCCCCTTSEEEEECTTSCSSSCCCEEEEHHHHH
T ss_pred hccC-Ccc-ee---------------------cchhhhhcccccccccCCCCCCCeEEEEeCCCCCCCCceEEeeHHHHH
Confidence 3211 111 11 111111111122223345568999999999999999999999999999
Q ss_pred HHhhhhhhhhhhccccCCCCCEEEEeCChhhHHHHHH-HHHhhhcCcEEEEeCC-----CHHHHHHHHHhhCCeEEEeCc
Q 014951 154 AEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQII-ETHCIHKGCSIGFWRG-----DVRYLMEDIQELKPTMFSGVP 227 (415)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~-~~~~l~~G~~vv~~~~-----~~~~~~~~i~~~~~t~~~~~P 227 (415)
..+...... ...+.++|++++++|++|.+++.. ++.++..|+++++.+. ++..+++.|+++++|++.++|
T Consensus 203 ~~~~~~~~~----~~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p 278 (576)
T 3gqw_A 203 ANLRAISHD----GIKLRPGDRCVSWLPFYHDMGLVGFLLTPVATQLSVDYLRTQDFAMRPLQWLKLISKNRGTVSVAPP 278 (576)
T ss_dssp HHHHHHHHT----TSCCCTTCCEEECCCTTSHHHHHHHTHHHHHTTCCEEECCHHHHHHCTTHHHHHHHHTTCCEEEECH
T ss_pred HHHHHhhhc----ccCCCCcceEEEcCCccccccHHHHHHHHHhcCceEEEcchhHhhhCHHHHHHHHHHhCCeEEEcCH
Confidence 888765433 126789999999999999999875 5677899999988763 889999999999999999999
Q ss_pred HHHHHHHHHHHHhhhcCChhhHHHHHHHHHhhhhccccCCCCCCccchhhHHHHHHHHHHhCCceeEEEEecCCCCHHHH
Q 014951 228 RVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVE 307 (415)
Q Consensus 228 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~~G~~~~~~~~ 307 (415)
++++.+.+.+... ... ....+++|.+++||+++++++.
T Consensus 279 ~~~~~l~~~~~~~----------------------------------~~~--------~~~l~~lr~~~~gg~~l~~~~~ 316 (576)
T 3gqw_A 279 FGYELCQRRVNEK----------------------------------DLA--------ELDLSCWRVAGIGAEPISAEQL 316 (576)
T ss_dssp HHHHHHHHSCCHH----------------------------------HHT--------TCCCTTCCEEEECSSCCCHHHH
T ss_pred HHHHHHHHHhccc----------------------------------ccc--------cCChhhhHhhhccCccCCHHHH
Confidence 9998765421110 000 1112489999999999999999
Q ss_pred HHHHHhc------CCceEEeeccCCCCceeeeecCCcc---------------------------cccCcccccccCeEE
Q 014951 308 EFLRVTS------GAPLTQGYGLTESCSGCFTSLADVF---------------------------NMIGTVGVPMTTVEA 354 (415)
Q Consensus 308 ~~~~~~~------~~~~~~~yG~tE~~~~~~~~~~~~~---------------------------~~~~~~G~~~~g~~~ 354 (415)
+++.+.+ +.++++.||+||++..++....... ....++|+|++++++
T Consensus 317 ~~~~~~~~~~~~~~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~G~p~~~~~~ 396 (576)
T 3gqw_A 317 HQFAECFRQVNFDNKTFMPCYGLAENALAVSFSDEASGVVVNEVDRDILEYQGKAVAPGAETRAVSTFVNCGKALPEHGI 396 (576)
T ss_dssp HHHHHHHGGGTCCGGGEEEEEECGGGSSEEEECCTTCCCCEEEEEHHHHHHHCBCCCCCTTCCCEEEEEBCCEECTTCEE
T ss_pred HHHHHHHhhcCCCcccccccCCcccccceeecccccCCccccccchhhhcccCcccccCccccCccceeecCCcCCCCeE
Confidence 9999887 6789999999999987765532210 012379999999999
Q ss_pred EEeecCCCCCCCCCCCCCCeEEEecCCccccccCCchhhhhhhcCCceecCceEEEcCCCC
Q 014951 355 RLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVIVDGWFHTGDIGEWQPMEL 415 (415)
Q Consensus 355 ~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gY~~~~~~~~~~~~~g~~~TGDlg~~d~~G~ 415 (415)
+|+| +++.. ++.|+.|||+|+||+++.|||++++.+.+.+.+|||+|||+|++ +||+
T Consensus 397 ~i~d-~~g~~--~~~g~~GEl~v~g~~~~~gY~~~~~~~~~~~~~g~~~TGDl~~~-~dG~ 453 (576)
T 3gqw_A 397 EIRN-EAGMP--VAERVVGHICISGPSLMSGYFGDQVSQDEIAATGWLDTGDLGYL-LDGY 453 (576)
T ss_dssp EEEC-TTSCB--CCTTBCEEEEEESTTSCCCBTTCHHHHHHHHHHSCEEEEEEEEE-ETTE
T ss_pred EEEC-CCCCC--CCCCCeEEEEEeCccccccccCCccccccccCCCeeeccceEEE-ECCE
Confidence 9999 77754 45669999999999999999999999888889999999999999 6774
No 31
>2vsq_A Surfactin synthetase subunit 3; ligase, peptidyl carrier protein, ligase phosphoprotein, TER module, phosphopantetheine; 2.60A {Bacillus subtilis}
Probab=100.00 E-value=3.1e-50 Score=428.33 Aligned_cols=333 Identities=18% Similarity=0.258 Sum_probs=270.2
Q ss_pred CccCCCCCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEcCCChhhhhhcCccCCCC
Q 014951 1 MRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLY 80 (415)
Q Consensus 1 L~~~Gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~ 80 (415)
|++.|+++||+|+|+++|++++++++|||+++|++++||+|.++.+++.+++++++++++|++.+....+... +.
T Consensus 506 L~~~Gv~~g~~V~i~~~~s~~~vv~~lailkaG~~~vpldp~~p~~rl~~il~~~~~~~vl~~~~~~~~~~~~-----~~ 580 (1304)
T 2vsq_A 506 LQKHGAGKGSVVALYTKRSLELVIGILGVLKAGAAYLPVDPKLPEDRISYMLADSAAACLLTHQEMKEQAAEL-----PY 580 (1304)
T ss_dssp HHHTTCCTTCEEEECCCSSHHHHHHHHHHHHTTCEEEECCTTSCHHHHHHHHHHHTCCEEEECSTTCTTSTTC-----CC
T ss_pred HHhcCcCCcCEEEEEeCCCHHHHHHHHHHHHHCCEEEEECCCCHHHHHHHHHHHcCCCEEEECcchhhhhhcc-----CC
Confidence 4578999999999999999999999999999999999999999999999999999999999998755432211 11
Q ss_pred ccEEEEecCCCchhhHHhhhcCceeecHHHHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEeecHHHHHHhhhhh
Q 014951 81 LKTIVSFANVSSSQKKEAEELGVSCFSWEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVD 160 (415)
Q Consensus 81 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~~~~ 160 (415)
....+.++... .. .. ..........+++++||+|||||||.||||+++|+++.+. ....
T Consensus 581 ~~~~~~~~~~~------------------~~-~~-~~~~~~~~~~~~~~ayiiyTSGSTG~PKgV~~~h~~l~~~-~~~~ 639 (1304)
T 2vsq_A 581 TGTTLFIDDQT------------------RF-EE-QASDPATAIDPNDPAYIMYTSGTTGKPKGNITTHANIQGL-VKHV 639 (1304)
T ss_dssp CSEEEESSCGG------------------GG-GS-CSSCCCCCCCTTSEEEEEEECCSSSSCEEEEEEHHHHHHH-HSSC
T ss_pred CCcEEEecccc------------------cc-cc-ccCCCCCCCCCCCeEEEEeCCCCCCCCCEEEEehHHHHHH-HHHH
Confidence 12333332210 00 00 1111223457899999999999999999999999999876 3333
Q ss_pred hhhhhccccCCCCCEEEEeCChhhHHHHHHHHHhhhcCcEEEEeCC----CHHHHHHHHHhhCCeEEEeCcHHHHHHHHH
Q 014951 161 QMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG----DVRYLMEDIQELKPTMFSGVPRVYDRIYTG 236 (415)
Q Consensus 161 ~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~vv~~~~----~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~ 236 (415)
..+ .+.++|+++.+.|++|..+...++.++..|+++++.+. ++..+++.|+++++|+++++|++++.+.+.
T Consensus 640 ~~~-----~~~~~d~~l~~~~~~fd~~~~~~~~~l~~G~~l~~~~~~~~~~~~~l~~~i~~~~vt~~~~~p~~~~~l~~~ 714 (1304)
T 2vsq_A 640 DYM-----AFSDQDTFLSVSNYAFDAFTFDFYASMLNAARLIIADEHTLLDTERLTDLILQENVNVMFATTALFNLLTDA 714 (1304)
T ss_dssp CSS-----CCCTTCEEEECSCTTSTHHHHHHHHHHTTTCEEEECCGGGTTCHHHHHHHHHHHTCCEEEEEHHHHHHHHHH
T ss_pred Hhc-----CCCCCCEEEEECCccHHHHHHHHHHHHHcCCEEEECChhhcCCHHHHHHHHHHcCCcEEEccHHHHHHHHhh
Confidence 333 67899999999999999988888999999999999864 899999999999999999999999987541
Q ss_pred HHHhhhcCChhhHHHHHHHHHhhhhccccCCCCCCccchhhHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHHHhcC-
Q 014951 237 ISNKISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSG- 315 (415)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~~G~~~~~~~~~~~~~~~~- 315 (415)
. ...+ +++|.+++|||++++++.+.+.+.++
T Consensus 715 ~----------------------------------------~~~~--------~~lr~~~~gGe~l~~~~~~~~~~~~~~ 746 (1304)
T 2vsq_A 715 G----------------------------------------EDWM--------KGLRCILFGGERASVPHVRKALRIMGP 746 (1304)
T ss_dssp C----------------------------------------SHHH--------HTCSEEEEESSCCCHHHHHHHHHHHCT
T ss_pred c----------------------------------------hhcC--------CCccEEEEecCCCCHHHHHHHHHhCCC
Confidence 0 0001 27999999999999999888887775
Q ss_pred CceEEeeccCCCCceeeeecCCc---ccccCcccccccCeEEEEeecCCCCCCCCCCCCCCeEEEecCCccccccCCchh
Q 014951 316 APLTQGYGLTESCSGCFTSLADV---FNMIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDL 392 (415)
Q Consensus 316 ~~~~~~yG~tE~~~~~~~~~~~~---~~~~~~~G~~~~g~~~~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gY~~~~~~ 392 (415)
.+++|.||+||++..++...... .....++|+|+++++++|+| +++.. ++.|+.|||+|+|+++++||+|+|++
T Consensus 747 ~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~i~d-~~~~~--~p~G~~GEl~i~G~~v~~GY~~~p~~ 823 (1304)
T 2vsq_A 747 GKLINCYGPTEGTVFATAHVVHDLPDSISSLPIGKPISNASVYILN-EQSQL--QPFGAVGELCISGMGVSKGYVNRADL 823 (1304)
T ss_dssp TCEEEEECCGGGSSCSEEEECCCCCSSCSSCCCBEECTTEEEEEEC-TTSCB--CCTTCCEEEEEEETTCCCCBTTCHHH
T ss_pred CEEEEeEChhHHhHHheeeeccCccccCCCCCCceeeCCCEEEEEC-CCcCC--CCCCCceEEEEeccccCccccCCccc
Confidence 68999999999998776554322 22346899999999999999 77654 45669999999999999999999999
Q ss_pred hhhhhc-------CCceecCceEEEcCCCC
Q 014951 393 TEEVIV-------DGWFHTGDIGEWQPMEL 415 (415)
Q Consensus 393 ~~~~~~-------~g~~~TGDlg~~d~~G~ 415 (415)
|.++|. ++||||||+|++++||+
T Consensus 824 T~~~f~~~p~~~g~~~yrTGDl~~~~~dG~ 853 (1304)
T 2vsq_A 824 TKEKFIENPFKPGETLYRTGDLARWLPDGT 853 (1304)
T ss_dssp HHHHEEECTTSTTCEEEEEEEEEEECTTSC
T ss_pred chhhhccCCCCCCCeeEecCCeEEEcCCCe
Confidence 999982 35999999999999995
No 32
>4gs5_A Acyl-COA synthetase (AMP-forming)/AMP-acid ligase protein; structural genomics, PSI-biology; 2.02A {Dyadobacter fermentans}
Probab=100.00 E-value=4.7e-36 Score=276.69 Aligned_cols=208 Identities=17% Similarity=0.184 Sum_probs=175.3
Q ss_pred CCCeEEEEecCCCCCCCceEEeecHHHHHHhhhhhhhhhhccccCCCCCEEEEeCChhhHHHHHHHHHhhhcCcEEEEeC
Q 014951 126 KTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWR 205 (415)
Q Consensus 126 ~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~vv~~~ 205 (415)
.+++++|+|||||||.||+|++||+++.+++......+ .+.++|++++++|++|++++..++.++..|+++++.+
T Consensus 36 ~d~~a~Il~TSGTTG~PKgV~~th~~l~~~~~~~~~~~-----~~~~~d~~l~~~pl~h~~gl~~~~~~l~~g~~~~~~~ 110 (358)
T 4gs5_A 36 GGAREFVLHTSGSTGMPKPITVTRAQLAASAAMTGKAL-----SLGPGTRALVCLNVGYIAGLMMLVRGMELDWELTVTE 110 (358)
T ss_dssp HTCSEEEEEEECTTSSEEEEEEEHHHHHHHHHHHHHHT-----TCCTTCEEEECSCTTSHHHHHHHHHHHHHTCEEEEEC
T ss_pred CCCCEEEEECCcccccCcEEEEeHHHHHHHHHHHHHHh-----CCCCCCEEEEECChHHHHHHHHHHHHHHhCcEEEecC
Confidence 47899999999999999999999999999998877776 7889999999999999999988888999999998886
Q ss_pred CCHHHHHHHHHhhCCeEEEeCcHHHHHHHHHHHHhhhcCChhhHHHHHHHHHhhhhccccCCCCCCccchhhHHHHHHHH
Q 014951 206 GDVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIR 285 (415)
Q Consensus 206 ~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (415)
. ....++.|+++++|++.++|+++..+++... ...++
T Consensus 111 ~-~~~~~~~i~~~~~t~~~~~P~~l~~ll~~~~--------------------------------------~~~~l---- 147 (358)
T 4gs5_A 111 P-TANPLAGLDHADFDFVAMVPMQLQSILENSA--------------------------------------TSGQV---- 147 (358)
T ss_dssp C-CSCTTTTCSSCCCSEEEECHHHHHHHHHCTT--------------------------------------TGGGG----
T ss_pred c-cccHHHHHHHhCCeEEEcChHHHHHhhcccc--------------------------------------ccccC----
Confidence 4 2234677899999999999999998865110 00011
Q ss_pred HHhCCceeEEEEecCCCCHHHHHHHHHhcCCceEEeeccCCCCceeeeecCCcccccCcccccccCeEEEEeecCCCCCC
Q 014951 286 EAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQGYGLTESCSGCFTSLADVFNMIGTVGVPMTTVEARLESVPEMGYD 365 (415)
Q Consensus 286 ~~~~~~lr~v~~~G~~~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~G~~~~g~~~~i~~~~~~~~~ 365 (415)
++||.+++||+++++++.+++++ ++.++++.||+||++..+.....+.... +++|.+.||+++.+.+
T Consensus 148 ----~~lr~v~~gG~~l~~~~~~~~~~-~~~~~~~~YG~TEt~~~~~~~~~~~~~~-g~~~~~~pgv~~~~~~------- 214 (358)
T 4gs5_A 148 ----DRLGKVLLGGAPVNHALAMQISD-LAMPVYQSYGMTETVSHVALKALNGPEA-SELYVFLPGIQYGVDE------- 214 (358)
T ss_dssp ----GGGCSEEECSSCCCHHHHHHHHT-CSSCEEEEEECGGGSSEEEEEECSSTTC-CSCEEECTTCEEEECT-------
T ss_pred ----CcceEEEEcccCCCchheecccc-cCceEEeccccccccceeeccccccccc-ceeeccCCCeEEEecC-------
Confidence 38999999999999999999986 6999999999999998887776655444 8899999999988744
Q ss_pred CCCCCCCCeEEEecCCccccccCCchhhhhhhcCCceecCceEEEcCCCC
Q 014951 366 ALSSVPRGEICLRGNTLFSGYYKRPDLTEEVIVDGWFHTGDIGEWQPMEL 415 (415)
Q Consensus 366 ~~~~~~~Gel~v~~~~~~~gY~~~~~~~~~~~~~g~~~TGDlg~~d~~G~ 415 (415)
.|||+++|+.. .+|||+|||+|++|+||+
T Consensus 215 ------~Gel~~~g~~~---------------~~g~~~TGDlg~~d~~g~ 243 (358)
T 4gs5_A 215 ------RGCLHISGAVT---------------NGQTVQTNDLVEIHGNAF 243 (358)
T ss_dssp ------TSEEEEESGGG---------------TTCCEEEEEEEEECSSEE
T ss_pred ------cCceEEecccc---------------cCcceecCCccccccCce
Confidence 59999988632 378999999999999874
No 33
>3qov_A Phenylacetate-coenzyme A ligase; acetyl-COA synthetase-like, structural genomics, joint cente structural genomics, JCSG; HET: MSE ADP COA; 2.20A {Bacteroides thetaiotaomicron} PDB: 3s89_A*
Probab=100.00 E-value=4e-34 Score=271.87 Aligned_cols=230 Identities=13% Similarity=0.092 Sum_probs=181.7
Q ss_pred CCCC-CCeEEEEecCCCCCCCceEEeecHHHHHHhhhhhhhhhhccccCCCCCEEEEeCChhhHHHHH-HHHHhhhcCcE
Q 014951 123 PKKK-TNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQI-IETHCIHKGCS 200 (415)
Q Consensus 123 ~~~~-~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~-~~~~~l~~G~~ 200 (415)
...+ +++++++|||||||.||+|++||+++......+...+. ...+.++|++++..|+.|..+.. ..+.++..|++
T Consensus 81 ~~~~~~~~a~i~~TSGTTG~PK~v~~th~~~~~~~~~~~~~~~--~~~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~G~~ 158 (436)
T 3qov_A 81 AGDMKRDGVRIHSSSGTTGNPTVIVHSQHDLDSWANLVARCLY--MVGIRKTDVFQNSSGYGMFTGGLGFQYGAERLGCL 158 (436)
T ss_dssp CSCHHHHEEEEEECSCSSSCCCEEEEEHHHHHHHHHHHHHHHH--HTTCCTTSEEEECSCCTTCHHHHHHHHHHHHHTCE
T ss_pred cCCCcCCeEEEEECCCcCCCCeEEEECHHHHHHHHHHHHHHHH--HcCCCCCCEEEECcccccchhHHHHHHHHHHcCCE
Confidence 4455 89999999999999999999999999877665543221 12678899999999997665555 57778999999
Q ss_pred EEEeCC-CHHHHHHHHHhhCCeEEEeCcHHHHHHHHHHHHhhhcCChhhHHHHHHHHHhhhhccccCCCCCCccchhhHH
Q 014951 201 IGFWRG-DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSL 279 (415)
Q Consensus 201 vv~~~~-~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (415)
+++.+. ++..+++.|+++++|+++++|+++..+++..........
T Consensus 159 ~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~---------------------------------- 204 (436)
T 3qov_A 159 TVPAAAGNSKRQIKFISDFKTTALHAIPSYAIRLAEVFQEEGIDPR---------------------------------- 204 (436)
T ss_dssp EECCCSCCHHHHHHHHHHHTCCEEECCHHHHHHHHHHHHHTTCCTT----------------------------------
T ss_pred EEeCCCCCHHHHHHHHHHHCCCEEEECHHHHHHHHHHHHHcCCCcc----------------------------------
Confidence 998865 999999999999999999999999998775433211100
Q ss_pred HHHHHHHHhCCceeEEEEecCCCCHHHHHHHHHhcCCceEEeeccCCCCceeeeecCCcccccCcccccccCeEEEEeec
Q 014951 280 VFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQGYGLTESCSGCFTSLADVFNMIGTVGVPMTTVEARLESV 359 (415)
Q Consensus 280 ~~~~~~~~~~~~lr~v~~~G~~~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~G~~~~g~~~~i~~~ 359 (415)
.+++|.+++||+++++++.+++.+.+++++++.||+||+++.++...... . ...+.+.+++.++|+|.
T Consensus 205 ---------~~~lr~i~~gGe~l~~~~~~~~~~~~g~~v~~~YG~TE~~~~~~~~~~~~--~-~g~~~~~~~~~v~i~d~ 272 (436)
T 3qov_A 205 ---------ETTLKTLVIGAEPHTDEQRRKIERMLNVKAYNSFGMTEMNGPGVAFECQE--Q-NGMHFWEDCYLVEIIDP 272 (436)
T ss_dssp ---------SSSCCEEEEESSCCCHHHHHHHHHHHTSEEEEEEEEGGGTEEEEEEECTT--C-SSEEECTTTEEEEEECT
T ss_pred ---------cCCccEEEEeCCcCCHHHHHHHHHHhCccEEecCcchhhcCCeeEEecCC--C-CeeEEccCceEEEEEEC
Confidence 13899999999999999999999999999999999999965533222211 1 33667778999999993
Q ss_pred CCCCCCCCCCCCCCeEEEecCCccccccCCchhhhhhhcCCceecCceEEEcCCC
Q 014951 360 PEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVIVDGWFHTGDIGEWQPME 414 (415)
Q Consensus 360 ~~~~~~~~~~~~~Gel~v~~~~~~~gY~~~~~~~~~~~~~g~~~TGDlg~~d~~G 414 (415)
+++ .+++.|+.|||+|+|. +...|.++||+|||+|++|+||
T Consensus 273 ~~g--~~~~~g~~Gel~v~~~------------~~~~~~~~~y~TGDl~~~~~~g 313 (436)
T 3qov_A 273 ETG--EPVPEGEIGELVLTTL------------DREMMPLIRYRTRDLTRILPGK 313 (436)
T ss_dssp TTC--SBCSTTCCEEEEEEES------------SCCSSCCCSEEEEEEECEECSC
T ss_pred CCC--CCCCCCCceEEEEecc------------CcCCceEEEEEcCCEEEEcCCC
Confidence 344 4556779999999983 3445678999999999999997
No 34
>2y27_A Phenylacetate-coenzyme A ligase; phenylacetic acid degradation pathway; HET: MSE PG4 ATP; 1.60A {Burkholderia cenocepacia} PDB: 2y4n_A*
Probab=100.00 E-value=1.3e-33 Score=268.39 Aligned_cols=247 Identities=17% Similarity=0.137 Sum_probs=187.4
Q ss_pred eecHHHHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEeecHHHHHHhhhhhhhhhhccccCCCCCEEEEeCCh-h
Q 014951 105 CFSWEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPL-A 183 (415)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~-~ 183 (415)
+.+.+++.... +.......++++++++|||||||.||+|++||+++..........+. ...+.++|++++..|+ +
T Consensus 70 ~~~~~~l~~~~--~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~t~~~~~~~~~~~~~~~~--~~~~~~~d~~~~~~~~~~ 145 (437)
T 2y27_A 70 FTTKGDLRDSY--PFGMFAVPQDRISRIHASSGTTGKPTVVGYTAADIDTWANLVARSIR--AAGARRGDKVHVSYGYGL 145 (437)
T ss_dssp CBCHHHHHHTT--TTTTCSSCGGGCCEEEECCCTTSSCCEEEECHHHHHHHHHHHHHHHH--HTTCCTTCEEEECSCCSS
T ss_pred CCCHHHHHhcC--CCccccCChhHeEEEEECCCCCCCceEEecCHHHHHHHHHHHHHHHH--HcCCCCCCEEEEcccccc
Confidence 34455554432 11233456789999999999999999999999999877655433211 1267889999999998 6
Q ss_pred hHHHHHHHHHhhhcCcEEEEeCC-CHHHHHHHHHhhCCeEEEeCcHHHHHHHHHHHHhhhcCChhhHHHHHHHHHhhhhc
Q 014951 184 HIYDQIIETHCIHKGCSIGFWRG-DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGN 262 (415)
Q Consensus 184 ~~~~~~~~~~~l~~G~~vv~~~~-~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (415)
|..++...+.++..|+++++.+. ++..+++.|++++||+++++|+++..+++........
T Consensus 146 ~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~i~~~~~t~l~~~Ps~~~~l~~~~~~~~~~------------------- 206 (437)
T 2y27_A 146 FTGGLGAHYGAERAGLTVIPFGGGQTEKQVQLIQDFRPDIIMVTPSYMLSIADEIERQGLD------------------- 206 (437)
T ss_dssp SHHHHHHHHHHHHTTCEEECCCSCCHHHHHHHHHHHCCSEEEECHHHHHHHHHHHHHTTCC-------------------
T ss_pred cccchHHHHHHHHcCCEEEeCCCCCHHHHHHHHHHhCCCEEEECHHHHHHHHHHHHHcCCC-------------------
Confidence 77777777888999999998776 9999999999999999999999999987644321100
Q ss_pred cccCCCCCCccchhhHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHHHhcCCceEEeeccCCCCce-eeeecCCcccc
Q 014951 263 MKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQGYGLTESCSG-CFTSLADVFNM 341 (415)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~~G~~~~~~~~~~~~~~~~~~~~~~yG~tE~~~~-~~~~~~~~~~~ 341 (415)
. ..+++|.+++||+++++++.+++++.+++++++.||+||+++. +....... .
T Consensus 207 -------------~-----------~~~~lr~i~~gGe~l~~~~~~~~~~~~g~~v~~~YG~TE~~g~~~~~~~~~~--~ 260 (437)
T 2y27_A 207 -------------P-----------VQSSLRIGIFGAEPWTNDMRVAIEQRMGIDAVDIYGLSEVMGPGVASECVET--K 260 (437)
T ss_dssp -------------G-----------GGSSCCEEEEESSCCCHHHHHHHHHHHTSEEEEEEEETTTTEEEEEECCTTT--C
T ss_pred -------------c-----------ccCCeeEEEEcCccCCHHHHHHHHHHHCcCEEecCCchhhcCCeeEEecCCC--C
Confidence 0 0038999999999999999999998899999999999998543 33322211 1
Q ss_pred cCcccccccCeEEEEeecCCCCCCCCCCCCCCeEEEecCCccccccCCchhhhhhhcCCceecCceEEEcC-CCC
Q 014951 342 IGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVIVDGWFHTGDIGEWQP-MEL 415 (415)
Q Consensus 342 ~~~~G~~~~g~~~~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gY~~~~~~~~~~~~~g~~~TGDlg~~d~-~G~ 415 (415)
...+.+.+++.++|+| ++.+ .+++.|+.|||+|+| .+.++|.++||+|||+|++|+ ||+
T Consensus 261 -~g~~~~~~~~~~~i~d-~~~g-~~~~~g~~Gel~v~~------------~t~~~~~~~~y~TGDl~~~~~~~G~ 320 (437)
T 2y27_A 261 -DGPTIWEDHFYPEIID-PETG-EVLPDGELGELVFTS------------LTKEALPIIRYRTRDLTRLLPGTAR 320 (437)
T ss_dssp -SSCEECTTTEEEEEEC-TTTC-CBCCTTCCEEEEEEE------------SSCSSSCCCSEEEEEEECEECCSSS
T ss_pred -CceeEccCceEEEEEc-CCCC-CCCCCCCccEEEEec------------CCcCCchhheeecCCEEEEeCCCCC
Confidence 1255677899999999 5422 455677999999998 234456789999999999999 685
No 35
>2y4o_A Phenylacetate-coenzyme A ligase; phenylacetic acid degradation pathway; HET: DLL; 1.90A {Burkholderia cenocepacia}
Probab=100.00 E-value=1.9e-33 Score=267.72 Aligned_cols=247 Identities=15% Similarity=0.102 Sum_probs=186.8
Q ss_pred eecHHHHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEeecHHHHHHhhhhhhhhhhccccCCCCCEEEEeCCh-h
Q 014951 105 CFSWEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPL-A 183 (415)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~-~ 183 (415)
+.+.+++.... +.......++++++++|||||||.||+|++||+++..........+. ...+.++|++++..|+ +
T Consensus 72 ~~~~~~l~~~~--p~~~~~~~~~~~~~i~~TSGTTG~PK~v~~t~~~~~~~~~~~~~~~~--~~~~~~~d~~l~~~~~~~ 147 (443)
T 2y4o_A 72 FSTKNDLRDNY--PFGLFAVPREQVVRVHASSGTTGKPTVVGYTARDIDTWANVTARSIR--AAGGRPGDTLHNAFGYGL 147 (443)
T ss_dssp CBCHHHHHTTT--TTTTCSSCGGGCCEEEEECCSSSSCEEEEECHHHHHHHHHHHHHHHH--HTTCCTTCEEEECSCCSS
T ss_pred CCcHHHHHhhC--CCcccCCChhheEEEEECCCCCCCceEEecCHHHHHHHHHHHHHHHH--HcCCCCCCEEEEeccCcc
Confidence 44555555432 11233456789999999999999999999999999877655443211 1267889999999998 5
Q ss_pred hHHHHHHHHHhhhcCcEEEEeCC-CHHHHHHHHHhhCCeEEEeCcHHHHHHHHHHHHhhhcCChhhHHHHHHHHHhhhhc
Q 014951 184 HIYDQIIETHCIHKGCSIGFWRG-DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGN 262 (415)
Q Consensus 184 ~~~~~~~~~~~l~~G~~vv~~~~-~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (415)
|..++...+.++..|+++++.+. ++..+++.|+++++|++.++|+++..+++........
T Consensus 148 ~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~i~~~~~t~l~~~Ps~~~~l~~~~~~~~~~------------------- 208 (443)
T 2y4o_A 148 FTGGLGIHYGAERLGCMVVPMSGGQTEKQVQLIRDFEPKIILVTPSYMLNLIDEMVRQGMD------------------- 208 (443)
T ss_dssp SHHHHHHHHHHHHHTCEEECCCSCCHHHHHHHHHHHCCSEEEECHHHHHHHHHHHHHTTCC-------------------
T ss_pred cccHHHHHHHHHHcCCEEEECCCCCHHHHHHHHHHhCCcEEEECHHHHHHHHHHHHHcCCC-------------------
Confidence 67776677888999999998776 9999999999999999999999999987643321100
Q ss_pred cccCCCCCCccchhhHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHHHhcCCceEEeeccCCCCce-eeeecCCcccc
Q 014951 263 MKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQGYGLTESCSG-CFTSLADVFNM 341 (415)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~~G~~~~~~~~~~~~~~~~~~~~~~yG~tE~~~~-~~~~~~~~~~~ 341 (415)
. ..+++|.+++||+++++++.+++++.+++++++.||+||+++. +....... .
T Consensus 209 -------------~-----------~~~~lr~i~~gGe~l~~~~~~~~~~~~g~~v~~~YG~TE~~g~~~~~~~~~~--~ 262 (443)
T 2y4o_A 209 -------------P-----------AESSLKIGIFGAEPWTQALRNEVETRVGIDALDIYGLSEVMGPGVACECVET--K 262 (443)
T ss_dssp -------------G-----------GGSSCCEEEEESSCCCHHHHHHHHHHHTCEEEEEEEETTTTEEEEEEECTTT--C
T ss_pred -------------c-----------ccCCceEEEECCCcCCHHHHHHHHHHhCcCEEeccCchhhcCCeEEeccCCC--C
Confidence 0 0138999999999999999999999899999999999998543 33322211 1
Q ss_pred cCcccccccCeEEEEeecCCCCCCCCCCCCCCeEEEecCCccccccCCchhhhhhhcCCceecCceEEEcCC-CC
Q 014951 342 IGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVIVDGWFHTGDIGEWQPM-EL 415 (415)
Q Consensus 342 ~~~~G~~~~g~~~~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gY~~~~~~~~~~~~~g~~~TGDlg~~d~~-G~ 415 (415)
...+.+.+++.++|+|.+++ .+++.|+.|||+|+|. +.++|.++||+|||+|++|++ |+
T Consensus 263 -~g~~~~~~~~~~~i~d~~~g--~~~~~G~~Gel~v~~~------------t~~~~p~~~y~TGDl~~~~~~cG~ 322 (443)
T 2y4o_A 263 -DGPVIWEDHFYPEIIDPVTG--EVLPDGSQGELVFTSL------------TKEAMPVIRYRTRDLTALLPPTAR 322 (443)
T ss_dssp -CSEEECTTTEEEEEECTTTC--CBCCTTCCEEEEEEES------------SCSSSCCSSEEEEEEECEECCSSS
T ss_pred -CceEEccCCeEEEEEcCCCC--CCCCCCCceEEEEeCC------------CcccChhheeecCCEEEEcCCCCC
Confidence 12455678999999993334 4555779999999972 344566899999999999998 84
No 36
>3hgu_A EHPF; phenazine, antibiotic, biosynthetic protein; 1.95A {Pantoea agglomerans} PDB: 3hgv_A 3l2k_A*
Probab=99.97 E-value=7.9e-31 Score=243.66 Aligned_cols=200 Identities=15% Similarity=0.126 Sum_probs=157.5
Q ss_pred CCCCCeEEEEecCCCCCCCceEEeecHHHHHHhhhhhhhhhhccccCCCCCEEEEeCCh-hhHHHHHHHHHhhhcCcEEE
Q 014951 124 KKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPL-AHIYDQIIETHCIHKGCSIG 202 (415)
Q Consensus 124 ~~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~-~~~~~~~~~~~~l~~G~~vv 202 (415)
..++++++++|||||||.||+|+++|+++..........+ ....+..+|++++.+|+ +|..++...+.++..|+.++
T Consensus 88 ~~~~~~a~i~~TSGTTG~PKgv~~t~~~~~~~~~~~~~~~--~~~~~~~~d~~l~~~p~g~~~~g~~~~~~~~~~G~~v~ 165 (369)
T 3hgu_A 88 LPADSHPQVYESGGTTGAPKYVVAYDAWIEALISWRMSGY--QHRPGRPSGNTLAAIPTGPHIVGAINKERALRLGGMFF 165 (369)
T ss_dssp SCTTCCCEEEEECC---CCEEEEECHHHHHHHHHHHTTTT--TTSTTCCCCEEEECSCCTTCHHHHHHHHHHHHTTSCEE
T ss_pred CCccccEEEEECCCCCCCCCEEEECHHHHHHHHHHHHhhH--HhhCCCCcceEEEecCCCchhhhHHHHHHHHHcCCEEE
Confidence 4678999999999999999999999999998887544322 12266889999999999 99999888777788999444
Q ss_pred EeCCCHH-----------------------HHHHHHHhhCCeEEEeCcHHHHHHHHHHHHhhhcCChhhHHHHHHHHHhh
Q 014951 203 FWRGDVR-----------------------YLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYK 259 (415)
Q Consensus 203 ~~~~~~~-----------------------~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (415)
..+.++. .+++.|+++++|++.++|+++..+++..
T Consensus 166 ~~~~dp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~t~l~~~Ps~~~~l~~~~---------------------- 223 (369)
T 3hgu_A 166 SIDIDPRWVKRSLSEGDTATVRKYTHHLVDQVQNTLMNQDIRFLVTTPPVLRELLKRP---------------------- 223 (369)
T ss_dssp CCCCCHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHSCEEEEEECHHHHHHHTTCH----------------------
T ss_pred CccCChHHHHHhhcccchhhhHHHHHHHHHHHHHHHHhCCCCEEEeCHHHHHHHHhhh----------------------
Confidence 4444776 8888999999999999999999886521
Q ss_pred hhccccCCCCCCccchhhHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHH-Hhc-CCceEEeeccCCCCceeeeecCC
Q 014951 260 LGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLR-VTS-GAPLTQGYGLTESCSGCFTSLAD 337 (415)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~~G~~~~~~~~~~~~-~~~-~~~~~~~yG~tE~~~~~~~~~~~ 337 (415)
.....++ +++|.+++||+++++++.+++. +.+ ++++++.||+||+++++.....
T Consensus 224 ---------------~~~~~~~--------~~lr~i~~gGe~l~~~~~~~~~~~~~p~~~v~~~YG~TE~~~~~~~~~~- 279 (369)
T 3hgu_A 224 ---------------EVVLQMK--------QSLAQITLGGTELNLDEIKFIASEILPDCEFSASYGSTSALGVSRSLLI- 279 (369)
T ss_dssp ---------------HHHHHHH--------HHCSEEEEESSCCCHHHHHHHHHHTCTTSEEEEEEEEGGGTEEEEECCB-
T ss_pred ---------------hhhcccc--------CCeeEEEECCccCCHHHHHHHHHHhCCCcEEEcccCchhhhcceecccc-
Confidence 0111112 2799999999999999999999 888 8999999999998866533211
Q ss_pred cccccCccccc------ccCeEEEEeecC-CCCCCCCCCCCCCeEEEec
Q 014951 338 VFNMIGTVGVP------MTTVEARLESVP-EMGYDALSSVPRGEICLRG 379 (415)
Q Consensus 338 ~~~~~~~~G~~------~~g~~~~i~~~~-~~~~~~~~~~~~Gel~v~~ 379 (415)
.++|+| .++++++|+| + ++. +++.|+.|||+|++
T Consensus 280 -----~~~G~~~~~~~~~~~~~v~ivD-~~~g~--~vp~G~~GEl~vt~ 320 (369)
T 3hgu_A 280 -----TSESQQVIYDSFSPFITYDVVD-SITAQ--TVEYGERGNVIVTH 320 (369)
T ss_dssp -----CTTCSSCEEECCTTTEEEEEEC-TTTCS--BCCTTCEEEEEEEE
T ss_pred -----ccCCCcccccCCCCCeEEEEEC-CCCCc--CCCCCCceEEEEEE
Confidence 248899 9999999999 5 554 55677999999987
No 37
>4b2g_A GH3-1 auxin conjugating enzyme; signaling protein, ignaling protein, adenylate, amino acid conjugation, plant growth; HET: V1N; 2.40A {Vitis vinifera}
Probab=97.26 E-value=0.0048 Score=59.32 Aligned_cols=32 Identities=25% Similarity=0.281 Sum_probs=26.8
Q ss_pred CCCCCeEEEEecCCCC-CCCceEEeecHHHHHH
Q 014951 124 KKKTNISTIMYTSGTT-GEPKGVVLTNQAIVAE 155 (415)
Q Consensus 124 ~~~~~~~~i~~TSGtT-G~pK~v~~th~~l~~~ 155 (415)
..++.+.++.-||||| |.||-|++|...+...
T Consensus 96 l~~~~i~~f~~SSGTT~gk~K~IP~t~~~l~~~ 128 (609)
T 4b2g_A 96 LSAHPISEFLTSSGTSAGERKLMPTIQEELDRR 128 (609)
T ss_dssp SCSSCCCEEEEEEEEETTEEEEEEECTTHHHHH
T ss_pred cCCCCCCeEEeCCCCCCCCceeeecCHHHHHHH
Confidence 3566778899999999 7799999999977664
No 38
>4eql_A 4-substituted benzoates-glutamate ligase GH3.12; firefly luciferase family, acyl adenylase, amino acid conjug ligase; HET: AMP SAL; 1.80A {Arabidopsis thaliana} PDB: 4epm_A* 4eq4_A* 4ewv_A*
Probab=97.19 E-value=0.013 Score=56.13 Aligned_cols=32 Identities=22% Similarity=0.272 Sum_probs=26.3
Q ss_pred CCCCCeEEEEecCCCC-CCCceEEeecHHHHHH
Q 014951 124 KKKTNISTIMYTSGTT-GEPKGVVLTNQAIVAE 155 (415)
Q Consensus 124 ~~~~~~~~i~~TSGtT-G~pK~v~~th~~l~~~ 155 (415)
..++.+.++.-||||| |.+|-+++|...+-..
T Consensus 90 L~~~pi~~F~~SSGTT~g~~K~IP~T~e~l~~~ 122 (581)
T 4eql_A 90 ISARTITGFLLSSGTSGGAQKMMPWNNKYLDNL 122 (581)
T ss_dssp TCSSCCCEEEEEEEEETTEEEEEEECHHHHHHH
T ss_pred cCCCCCCeEEeCCCCCCCCccccccCHHHHHHH
Confidence 3456677899999999 6799999999977654
No 39
>4epl_A Jasmonic acid-amido synthetase JAR1; ANL adenylating enzyme, acyl acid-amido synthetase, adenylat ligase; HET: JAI; 2.01A {Arabidopsis thaliana}
Probab=96.15 E-value=0.017 Score=55.24 Aligned_cols=32 Identities=25% Similarity=0.397 Sum_probs=26.4
Q ss_pred CCCCCeEEEEecCCCC-CCCceEEeecHHHHHH
Q 014951 124 KKKTNISTIMYTSGTT-GEPKGVVLTNQAIVAE 155 (415)
Q Consensus 124 ~~~~~~~~i~~TSGtT-G~pK~v~~th~~l~~~ 155 (415)
..++.+.++.-||||| |.+|-+++|...+...
T Consensus 95 L~~~pi~~f~~SSGTT~gk~K~IP~T~~~l~~~ 127 (581)
T 4epl_A 95 LTGHPVPAISLSSGTSQGRPKFIPFTDELMENT 127 (581)
T ss_dssp SSSSCCSEEEEEEEEETTEEEEEEECHHHHHHH
T ss_pred cCCCCcceEEecCCCCCCCccccccCHHHHHHH
Confidence 3556678899999999 7799999999877653
No 40
>3g7s_A Long-chain-fatty-acid--COA ligase (FADD-1); protein structure initiative, PSI-II, NYSGXRC, 11193J, structural genomics; 2.15A {Archaeoglobus fulgidus dsm 4304}
Probab=76.79 E-value=35 Score=32.35 Aligned_cols=106 Identities=7% Similarity=-0.104 Sum_probs=77.0
Q ss_pred CCCeEEEEecCCCCCCCceEEeecHHHHHHhhhhhhhhhhccccCCCCCEEEEeCChhhHHHHHHHHHhhhcCcEEEEeC
Q 014951 126 KTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWR 205 (415)
Q Consensus 126 ~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~vv~~~ 205 (415)
++.+|++....+..+ -..-.+|...+...+..+...+. .....++|++..+++-+. -....+++++..|+..+...
T Consensus 33 p~~~A~~~~~~~~~~-~~~~~~Ty~el~~~~~~lA~~L~--~~Gv~~gd~V~i~~~~~~-~~~~~~lA~~~~G~~~vpl~ 108 (549)
T 3g7s_A 33 GEKTAIISAEPKFPS-EFPESMNFLEICEVTKKLASGIS--RKGVRKGEHVGVCIPNSI-DYVMTIYALWRVAATPVPIN 108 (549)
T ss_dssp TTSEEEEEESSCCCC-SSCSEEEHHHHHHHHHHHHHHHH--HTTCCTTCEEEEECCSSH-HHHHHHHHHHHTTCEEEECC
T ss_pred CCceEEEeCCCcccc-cccceeeHHHHHHHHHHHHHHHH--HcCCCCCCEEEEECCCCH-HHHHHHHHHHHhCCEEEccC
Confidence 566776654321111 11246899999988887776553 236789999999888753 33445778899999999887
Q ss_pred C--CHHHHHHHHHhhCCeEEEeCcHHHHHHHH
Q 014951 206 G--DVRYLMEDIQELKPTMFSGVPRVYDRIYT 235 (415)
Q Consensus 206 ~--~~~~~~~~i~~~~~t~~~~~P~~~~~l~~ 235 (415)
. ..+++...++..++..++..+.....+..
T Consensus 109 ~~~~~~~l~~il~~~~~~~~i~~~~~~~~~~~ 140 (549)
T 3g7s_A 109 PMYKSFELEHILNDSEATTLVVHSMLYENFKP 140 (549)
T ss_dssp TTCCHHHHHHHHHHTTCSEEEEEGGGHHHHHH
T ss_pred CCCCHHHHHHHHHhcCCCEEEEChHHHHHHHH
Confidence 6 88999999999999999998887766544
No 41
>3ivr_A Putative long-chain-fatty-acid COA ligase; structural genomics, PSI-2, protein S initiative, fatty acid synthesis; HET: GOL; 2.00A {Rhodopseudomonas palustris} SCOP: e.23.1.0
Probab=76.53 E-value=26 Score=32.81 Aligned_cols=98 Identities=9% Similarity=-0.032 Sum_probs=75.3
Q ss_pred CCCeEEEEecCCCCCCCceEEeecHHHHHHhhhhhhhhhhccccCCCCCEEEEeCChhhHHHHHHHHHhhhcCcEEEEeC
Q 014951 126 KTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWR 205 (415)
Q Consensus 126 ~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~vv~~~ 205 (415)
|+.+|++. ....+|.+.+...+..+...+.. ....++|++...++-+. -....+++++..|+..+...
T Consensus 20 pd~~Al~~---------~~~~~Ty~eL~~~~~~lA~~L~~--~Gv~~gd~V~i~~~~~~-~~~~~~lA~~~~Ga~~vpl~ 87 (509)
T 3ivr_A 20 PDRTAFMV---------DGVRLTHRDYLARAERLASGLLR--DGVHTGDRVAILSQNCS-EMIELIGAVALIGAILLPVN 87 (509)
T ss_dssp TTSEEEEE---------TTEEEEHHHHHHHHHHHHHHHHH--TTCCTTCEEEEECCSCH-HHHHHHHHHHHTTCEEEECC
T ss_pred CCceEEEE---------CCcEEcHHHHHHHHHHHHHHHHH--cCCCCCCEEEEEcCCCH-HHHHHHHHHHHhCCEEEecC
Confidence 56677653 12579999999988887765532 36789999999888753 33445778899999999887
Q ss_pred C--CHHHHHHHHHhhCCeEEEeCcHHHHHHHH
Q 014951 206 G--DVRYLMEDIQELKPTMFSGVPRVYDRIYT 235 (415)
Q Consensus 206 ~--~~~~~~~~i~~~~~t~~~~~P~~~~~l~~ 235 (415)
. ..+++...++..++..++..+.....+..
T Consensus 88 ~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~ 119 (509)
T 3ivr_A 88 YRLNADEIAFVLGDGAPSVVVAGTDYRDIVAG 119 (509)
T ss_dssp TTSCHHHHHHHHHHHCEEEEEECSTTHHHHHH
T ss_pred CCCCHHHHHHHHHhcCceEEEECcchhhhHHh
Confidence 6 88999999999999999998887666443
No 42
>1v25_A Long-chain-fatty-acid-COA synthetase; ligase, structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: ANP; 2.30A {Thermus thermophilus} SCOP: e.23.1.1 PDB: 1ult_A* 1v26_A*
Probab=75.88 E-value=38 Score=32.01 Aligned_cols=101 Identities=5% Similarity=-0.148 Sum_probs=74.6
Q ss_pred CCCeEEEEecCCCCCCCceEEeecHHHHHHhhhhhhhhhhccccCCCCCEEEEeCChhhHHHHHHHHHhhhcCcEEEEeC
Q 014951 126 KTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWR 205 (415)
Q Consensus 126 ~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~vv~~~ 205 (415)
++.++++....+ ....+|...+...+..+...+. .....++|++...++-+. -....+++++..|+..+...
T Consensus 32 p~~~a~~~~~~~-----~~~~~Ty~el~~~~~~lA~~L~--~~Gv~~gd~V~i~~~n~~-e~~~~~lA~~~~Gav~vpl~ 103 (541)
T 1v25_A 32 GRKEVVSRLHTG-----EVHRTTYAEVYQRARRLMGGLR--ALGVGVGDRVATLGFNHF-RHLEAYFAVPGMGAVLHTAN 103 (541)
T ss_dssp TTCEEEEECTTS-----CEEEEEHHHHHHHHHHHHHHHH--HTTCCTTCEEEEECCSSH-HHHHHHHHHHHTTCEEEECC
T ss_pred CCceEEEEecCC-----CCceecHHHHHHHHHHHHHHHH--HcCCCCCCEEEEEcCCcH-HHHHHHHHHHhcCcEEEecC
Confidence 455666543211 2457899999988887766553 236789999999888653 33345778899999999887
Q ss_pred C--CHHHHHHHHHhhCCeEEEeCcHHHHHHH
Q 014951 206 G--DVRYLMEDIQELKPTMFSGVPRVYDRIY 234 (415)
Q Consensus 206 ~--~~~~~~~~i~~~~~t~~~~~P~~~~~l~ 234 (415)
. .++++...++..++..++..+.....+.
T Consensus 104 ~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~ 134 (541)
T 1v25_A 104 PRLSPKEIAYILNHAEDKVLLFDPNLLPLVE 134 (541)
T ss_dssp TTSCHHHHHHHHHHHTCSEEEECGGGHHHHH
T ss_pred cccCHHHHHHHHHhCCCcEEEEChhHHHHHH
Confidence 6 8899999999999999999887765543
No 43
>3rix_A Luciferase, luciferin 4-monooxygenase; oxidoreductase, photoprotein, luminescence, aspulvinone, natural product extracts; HET: 923; 1.70A {Photinus pyralis} SCOP: e.23.1.1 PDB: 1ba3_A 1lci_A* 4e5d_A* 3ies_A* 3iep_A* 3ier_A* 4g36_A* 4g37_A* 3qya_A
Probab=75.30 E-value=10 Score=36.14 Aligned_cols=88 Identities=9% Similarity=0.015 Sum_probs=69.6
Q ss_pred EEeecHHHHHHhhhhhhhhhhccccCCCCCEEEEeCChhhHHHHHHHHHhhhcCcEEEEeCC--CHHHHHHHHHhhCCeE
Q 014951 145 VVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTM 222 (415)
Q Consensus 145 v~~th~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~vv~~~~--~~~~~~~~i~~~~~t~ 222 (415)
..+|.+.+...+..+...+.. .+..++|++..+++-+. -....+++++..|+..+.... ...++...++..++..
T Consensus 49 ~~~Ty~el~~~~~~lA~~L~~--~Gv~~gd~V~i~~~n~~-e~~~~~lA~~~~Gav~vpl~~~~~~~~l~~~l~~~~~~~ 125 (550)
T 3rix_A 49 VNITYAEYFEMSVRLAEAMKR--YGLNTNHRIVVCSENSL-QFFMPVLGALFIGVAVAPANDIYNERELLNSMNISQPTV 125 (550)
T ss_dssp CEEEHHHHHHHHHHHHHHHHH--HTCCTTCEEEEECSSCT-TTHHHHHHHHHHTCEEEECCTTCCHHHHHHHHHHHCCSE
T ss_pred cEeEHHHHHHHHHHHHHHHHH--hCCCCCCEEEEEcCCcc-cHHHHHHHHHHcCCEEeecCCcCCHHHHHHHHHhcCCeE
Confidence 368999999888877765532 36789999999888653 233457788899999988876 8899999999999999
Q ss_pred EEeCcHHHHHHHH
Q 014951 223 FSGVPRVYDRIYT 235 (415)
Q Consensus 223 ~~~~P~~~~~l~~ 235 (415)
++........+..
T Consensus 126 vi~~~~~~~~~~~ 138 (550)
T 3rix_A 126 VFVSKKGLQKILN 138 (550)
T ss_dssp EEECGGGHHHHHH
T ss_pred EEEcHHHHHHHHH
Confidence 9999887776654
No 44
>2y27_A Phenylacetate-coenzyme A ligase; phenylacetic acid degradation pathway; HET: MSE PG4 ATP; 1.60A {Burkholderia cenocepacia} PDB: 2y4n_A*
Probab=74.34 E-value=7.4 Score=35.82 Aligned_cols=87 Identities=15% Similarity=0.063 Sum_probs=62.6
Q ss_pred cCCCCCCCeEEEEcCCc--HhHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEcCCChhhhhhcCc---c-
Q 014951 3 SRGVNPGDRCGIYGSNC--PEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLP---R- 76 (415)
Q Consensus 3 ~~Gv~~gd~V~l~~~n~--~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~---~- 76 (415)
..|++++|++...++-+ .......++++..|+.++++++ .+++.+...+++.++.+++........+.+... .
T Consensus 128 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~-~~~~~~~~~i~~~~~t~l~~~Ps~~~~l~~~~~~~~~~ 206 (437)
T 2y27_A 128 AAGARRGDKVHVSYGYGLFTGGLGAHYGAERAGLTVIPFGG-GQTEKQVQLIQDFRPDIIMVTPSYMLSIADEIERQGLD 206 (437)
T ss_dssp HTTCCTTCEEEECSCCSSSHHHHHHHHHHHHTTCEEECCCS-CCHHHHHHHHHHHCCSEEEECHHHHHHHHHHHHHTTCC
T ss_pred HcCCCCCCEEEEcccccccccchHHHHHHHHcCCEEEeCCC-CCHHHHHHHHHHhCCCEEEECHHHHHHHHHHHHHcCCC
Confidence 36889999999998853 3444557888999999987765 478899999999999999988876665543321 0
Q ss_pred -CCCCccEEEEecCC
Q 014951 77 -CCLYLKTIVSFANV 90 (415)
Q Consensus 77 -~~~~~~~v~~~~~~ 90 (415)
....++.++.-+..
T Consensus 207 ~~~~~lr~i~~gGe~ 221 (437)
T 2y27_A 207 PVQSSLRIGIFGAEP 221 (437)
T ss_dssp GGGSSCCEEEEESSC
T ss_pred cccCCeeEEEEcCcc
Confidence 12456666665544
No 45
>3ni2_A 4-coumarate:COA ligase; 4CL, phenylpropanoid biosynthesis; HET: AYL EPE; 1.90A {Populus tomentosa} PDB: 3a9v_A* 3a9u_A*
Probab=74.14 E-value=26 Score=33.15 Aligned_cols=101 Identities=14% Similarity=0.082 Sum_probs=75.6
Q ss_pred CCCCeEEEEecCCCCCCCceEEeecHHHHHHhhhhhhhhhhccccCCCCCEEEEeCChhhHHHHHHHHHhhhcCcEEEEe
Q 014951 125 KKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFW 204 (415)
Q Consensus 125 ~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~vv~~ 204 (415)
.++.++++.. .+| -.+|...+...+..+...+.. ....++|++...++-+. -....+++++..|+..+..
T Consensus 35 ~p~~~a~~~~---~~~----~~~Ty~el~~~~~~lA~~L~~--~Gv~~gd~V~i~~~~~~-~~~~~~la~~~~Gav~vpl 104 (536)
T 3ni2_A 35 HSSKPCLING---ANG----DVYTYADVELTARRVASGLNK--IGIQQGDVIMLFLPSSP-EFVLAFLGASHRGAIITAA 104 (536)
T ss_dssp STTSEEEEET---TTC----CEEEHHHHHHHHHHHHHHHHH--TTCCTTCEEEEECCSSH-HHHHHHHHHHHHTCEEEEC
T ss_pred CCCceEEEEC---CCC----CEEEHHHHHHHHHHHHHHHHH--cCCCCCCEEEEEcCCcH-HHHHHHHHHHHhCCEEecc
Confidence 4567776532 222 368999998888877765532 36789999999888753 3344577889999999888
Q ss_pred CC--CHHHHHHHHHhhCCeEEEeCcHHHHHHHH
Q 014951 205 RG--DVRYLMEDIQELKPTMFSGVPRVYDRIYT 235 (415)
Q Consensus 205 ~~--~~~~~~~~i~~~~~t~~~~~P~~~~~l~~ 235 (415)
.. .++++...++..++..++..+.....+..
T Consensus 105 ~~~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~ 137 (536)
T 3ni2_A 105 NPFSTPAELAKHAKASRAKLLITQACYYEKVKD 137 (536)
T ss_dssp CTTCCHHHHHHHHHHHTEEEEEECGGGTHHHHH
T ss_pred CCCCCHHHHHHHHHhcCCEEEEEChHHHHHHHH
Confidence 76 88999999999999999998877666544
No 46
>3qov_A Phenylacetate-coenzyme A ligase; acetyl-COA synthetase-like, structural genomics, joint cente structural genomics, JCSG; HET: MSE ADP COA; 2.20A {Bacteroides thetaiotaomicron} PDB: 3s89_A*
Probab=73.54 E-value=8.7 Score=35.31 Aligned_cols=87 Identities=11% Similarity=-0.064 Sum_probs=63.6
Q ss_pred CCCCCCCeEEEEcCC--cHhHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEcCCChhhhhhcCc---c--
Q 014951 4 RGVNPGDRCGIYGSN--CPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLP---R-- 76 (415)
Q Consensus 4 ~Gv~~gd~V~l~~~n--~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~---~-- 76 (415)
.|+.++|++...++- ....+..+++++..|+.+++.++ ..++.+...+++.++.+++........+.+... .
T Consensus 125 ~~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~G~~~~~~~~-~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~ 203 (436)
T 3qov_A 125 VGIRKTDVFQNSSGYGMFTGGLGFQYGAERLGCLTVPAAA-GNSKRQIKFISDFKTTALHAIPSYAIRLAEVFQEEGIDP 203 (436)
T ss_dssp TTCCTTSEEEECSCCTTCHHHHHHHHHHHHHTCEEECCCS-CCHHHHHHHHHHHTCCEEECCHHHHHHHHHHHHHTTCCT
T ss_pred cCCCCCCEEEECcccccchhHHHHHHHHHHcCCEEEeCCC-CCHHHHHHHHHHHCCCEEEECHHHHHHHHHHHHHcCCCc
Confidence 589999999999874 34455567888999999987764 477888999999999999988876665544311 1
Q ss_pred CCCCccEEEEecCCC
Q 014951 77 CCLYLKTIVSFANVS 91 (415)
Q Consensus 77 ~~~~~~~v~~~~~~~ 91 (415)
....++.++.-+...
T Consensus 204 ~~~~lr~i~~gGe~l 218 (436)
T 3qov_A 204 RETTLKTLVIGAEPH 218 (436)
T ss_dssp TSSSCCEEEEESSCC
T ss_pred ccCCccEEEEeCCcC
Confidence 134667777665543
No 47
>2y4o_A Phenylacetate-coenzyme A ligase; phenylacetic acid degradation pathway; HET: DLL; 1.90A {Burkholderia cenocepacia}
Probab=70.93 E-value=8.7 Score=35.39 Aligned_cols=87 Identities=16% Similarity=0.057 Sum_probs=62.7
Q ss_pred cCCCCCCCeEEEEcCCc--HhHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEcCCChhhhhhcCcc----
Q 014951 3 SRGVNPGDRCGIYGSNC--PEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPR---- 76 (415)
Q Consensus 3 ~~Gv~~gd~V~l~~~n~--~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~---- 76 (415)
..|+.++|++...++-+ ...+...++++..|+.++++++. +++.+...+++.++.+++........+.+....
T Consensus 130 ~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~-~~~~~~~~i~~~~~t~l~~~Ps~~~~l~~~~~~~~~~ 208 (443)
T 2y4o_A 130 AAGGRPGDTLHNAFGYGLFTGGLGIHYGAERLGCMVVPMSGG-QTEKQVQLIRDFEPKIILVTPSYMLNLIDEMVRQGMD 208 (443)
T ss_dssp HTTCCTTCEEEECSCCSSSHHHHHHHHHHHHHTCEEECCCSC-CHHHHHHHHHHHCCSEEEECHHHHHHHHHHHHHTTCC
T ss_pred HcCCCCCCEEEEeccCcccccHHHHHHHHHHcCCEEEECCCC-CHHHHHHHHHHhCCcEEEECHHHHHHHHHHHHHcCCC
Confidence 46889999999998863 34455678888999999887654 788899999999999999888766555432110
Q ss_pred -CCCCccEEEEecCC
Q 014951 77 -CCLYLKTIVSFANV 90 (415)
Q Consensus 77 -~~~~~~~v~~~~~~ 90 (415)
....++.++.-+..
T Consensus 209 ~~~~~lr~i~~gGe~ 223 (443)
T 2y4o_A 209 PAESSLKIGIFGAEP 223 (443)
T ss_dssp GGGSSCCEEEEESSC
T ss_pred cccCCceEEEECCCc
Confidence 12456666665554
No 48
>1t5h_X 4-chlorobenzoyl COA ligase; adenylate-forming coenzyme A ligase domain alternation confo change; 2.00A {Alcaligenes SP} SCOP: e.23.1.1 PDB: 1t5d_X 3cw9_A* 3cw8_X* 2qvz_X* 2qw0_X* 3dlp_X* 2qvx_X* 2qvy_X*
Probab=68.04 E-value=53 Score=30.66 Aligned_cols=98 Identities=16% Similarity=0.028 Sum_probs=70.6
Q ss_pred CCCeEEEEecCCCCCCCceEEeecHHHHHHhhhhhhhhhhccccCCCCCEEEEeCChhhHHHHHHHHHhhhcCcEEEEeC
Q 014951 126 KTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWR 205 (415)
Q Consensus 126 ~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~vv~~~ 205 (415)
++.++++.. . .+..+|.+.+...+..+...+.. ....++|++...++-+. -....+++++..|+..+...
T Consensus 16 p~~~a~~~~---~----~~~~~Ty~el~~~~~~~A~~L~~--~Gv~~gd~V~i~~~~~~-~~~~~~lA~~~~G~~~vpl~ 85 (504)
T 1t5h_X 16 PDHCALAVP---A----RGLRLTHAELRARVEAVAARLHA--DGLRPQQRVAVVAPNSA-DVVIAILALHRLGAVPALLN 85 (504)
T ss_dssp TTSEEEEET---T----TTEEEEHHHHHHHHHHHHHHHHH--TTCCTTCEEEEECCSCH-HHHHHHHHHHHHTCEEEEEC
T ss_pred CCceEEEEc---C----CCceeEHHHHHHHHHHHHHHHHH--cCCCCCCEEEEEcCCCH-HHHHHHHHHHHhCcEEEecC
Confidence 456666532 1 13579999999888877665532 36789999999888664 23445778899999999887
Q ss_pred C--CHHHHHHHHHhhCCeEEEe--CcHHHHHH
Q 014951 206 G--DVRYLMEDIQELKPTMFSG--VPRVYDRI 233 (415)
Q Consensus 206 ~--~~~~~~~~i~~~~~t~~~~--~P~~~~~l 233 (415)
. .++++...++..+++.+.. .+.....+
T Consensus 86 ~~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~ 117 (504)
T 1t5h_X 86 PRLKSAELAELIKRGEMTAAVIAVGRQVADAI 117 (504)
T ss_dssp TTSCHHHHHHHHHHTTCSEEEECC--CHHHHH
T ss_pred CccChHHHHHHHhhcCCcEEEEecchhhhhhh
Confidence 6 7889999999999999888 66554443
No 49
>3t5a_A Long-chain-fatty-acid--AMP ligase FADD28; acetyl-COA synthetase like fold, AMP-binding; 2.05A {Mycobacterium tuberculosis} PDB: 3e53_A
Probab=68.02 E-value=68 Score=29.52 Aligned_cols=107 Identities=9% Similarity=-0.025 Sum_probs=75.8
Q ss_pred CCCCeEEEEecCCCCCCCceEEeecHHHHHHhhhhhhhhhhccccCCCCCEEEEeCChhhHHHHHHHHHhhhcCcEEEEe
Q 014951 125 KKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFW 204 (415)
Q Consensus 125 ~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~vv~~ 204 (415)
.++.+|++.........-....+|.+.+...+..+...+... .. ++|++...++-+. -....+++++..|+..+.+
T Consensus 37 ~pd~~Al~~~~~~~~~~g~~~~~Ty~el~~~~~~lA~~L~~~--g~-~gd~V~i~~~n~~-e~~~~~lA~~~~G~v~vpl 112 (480)
T 3t5a_A 37 QPHDPAFTFMDYEQDWDGVAITLTWSQLYRRTLNVAQELSRC--GS-TGDRVVISAPQGL-EYVVAFLGALQAGRIAVPL 112 (480)
T ss_dssp STTSEEEEEEETTTCTTCEEEEEEHHHHHHHHHHHHHHHTTS--SC-TTCEEEEECCSSH-HHHHHHHHHHHTTCEEEEE
T ss_pred CCCCceEEEecccCCCCCceEEEcHHHHHHHHHHHHHHHHhc--CC-CCCEEEEEcCCcH-HHHHHHHHHHHhCcEEEee
Confidence 356777765442211112346899999999988887765332 33 8899988877653 3344577889999998887
Q ss_pred CC-----CHHHHHHHHHhhCCeEEEeCcHHHHHHHH
Q 014951 205 RG-----DVRYLMEDIQELKPTMFSGVPRVYDRIYT 235 (415)
Q Consensus 205 ~~-----~~~~~~~~i~~~~~t~~~~~P~~~~~l~~ 235 (415)
.. ..+++...++..++..++..+.....+.+
T Consensus 113 ~~~~~~~~~~~l~~il~~~~~~~vi~~~~~~~~~~~ 148 (480)
T 3t5a_A 113 SVPQGGVTDERSDSVLSDSSPVAILTTSSAVDDVVQ 148 (480)
T ss_dssp CSCCSCTTCCHHHHHHHHHCCSEEEECTTTHHHHHH
T ss_pred CCCCccchHHHHHHHHHhCCCCEEEeChhHHHHHHH
Confidence 43 56789999999999999998887766543
No 50
>1amu_A GRSA, gramicidin synthetase 1; peptide synthetase, adenylate forming; HET: PHE AMP; 1.90A {Brevibacillus brevis} SCOP: e.23.1.1
Probab=67.71 E-value=61 Score=30.83 Aligned_cols=85 Identities=8% Similarity=-0.046 Sum_probs=66.1
Q ss_pred EEeecHHHHHHhhhhhhhhhhccccCCCCCEEEEeCChhhHHHHHHHHHhhhcCcEEEEeCC--CHHHHHHHHHhhCCeE
Q 014951 145 VVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTM 222 (415)
Q Consensus 145 v~~th~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~vv~~~~--~~~~~~~~i~~~~~t~ 222 (415)
-.+|.+.+...+..+...+.. ..+.++|++...++-+. -....+++++..|+..+.... .++++...++..++..
T Consensus 63 ~~~Ty~eL~~~~~~lA~~L~~--~Gv~~gd~V~i~~~n~~-e~~~~~lA~~~~Gav~vpl~~~~~~~~l~~il~~~~~~~ 139 (563)
T 1amu_A 63 EQLTYHELNVKANQLARIFIE--KGIGKDTLVGIMMEKSI-DLFIGILAVLKAGGAYVPIDIEYPKERIQYILDDSQARM 139 (563)
T ss_dssp EEEEHHHHHHHHHHHHHHHHH--TTCCTTCEEEEECCSSH-HHHHHHHHHHHTTCEEEECCTTSCHHHHHHHHHHHTCSE
T ss_pred ceecHHHHHHHHHHHHHHHHH--cCCCCCCEEEEEeCCCH-HHHHHHHHHHHhCCEEEEeCCCCcHHHHHHHHHhcCCCE
Confidence 368999998888777665432 36789999998888663 333457788999999998876 8889999999999999
Q ss_pred EEeCcHHHHH
Q 014951 223 FSGVPRVYDR 232 (415)
Q Consensus 223 ~~~~P~~~~~ 232 (415)
++..+.....
T Consensus 140 li~~~~~~~~ 149 (563)
T 1amu_A 140 LLTQKHLVHL 149 (563)
T ss_dssp EEECGGGHHH
T ss_pred EEEcCchhhh
Confidence 9988765543
No 51
>4gr5_A Non-ribosomal peptide synthetase; MBTH-like domain, adenylation domain, ligase, rossmann fold, binding; HET: APC TLA; 1.92A {Streptomyces lydicus} PDB: 4gr4_A
Probab=67.69 E-value=22 Score=34.06 Aligned_cols=89 Identities=6% Similarity=-0.009 Sum_probs=67.5
Q ss_pred cCCCCCCCeEEEEcCCcH-hHHHHHHHHHHcCCEEEecCC-CCCHHHHHHHHHhcCceEEEEcCCChhhhhhcCccCCCC
Q 014951 3 SRGVNPGDRCGIYGSNCP-EWIIAMEACNSQAITYVPLYD-TLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLY 80 (415)
Q Consensus 3 ~~Gv~~gd~V~l~~~n~~-~~~~~~lA~~~~G~~~~~l~~-~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~ 80 (415)
..++.++|++..++|-+. -....+++++..|+.++.... ...+..+...+++.++.++.........+.+......+.
T Consensus 248 ~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~ 327 (570)
T 4gr5_A 248 YAGFGPDEVFLQCSPVSWDAFGLELFGALLFGARCVLQSGQNPDPLEIGELVARHGVTMLQLSASLFNFLVDEVPEAFEG 327 (570)
T ss_dssp SSCCSTTCEEEECSCTTSSTHHHHHHHHHTTTCEEEECSSSSCCHHHHHHHHHHHTCCEEEEEHHHHHHHHHHCGGGGTT
T ss_pred hcCCCCCCEEEEecCccHHHHHHHHHHHHhcCCEEEEcCCccCCHHHHHHHHHHcCCcEEEecHHHHHHHHhhchhhCCC
Confidence 357889999999988753 344567788889998887754 567889999999999999999887777666555444567
Q ss_pred ccEEEEecCCC
Q 014951 81 LKTIVSFANVS 91 (415)
Q Consensus 81 ~~~v~~~~~~~ 91 (415)
++.++.-+...
T Consensus 328 lr~~~~gG~~l 338 (570)
T 4gr5_A 328 VRYAITGGEPA 338 (570)
T ss_dssp CSEEEEESSCC
T ss_pred ceEEEEecccC
Confidence 77777766543
No 52
>1ry2_A Acetyl-coenzyme A synthetase 1, acyl-activating enzyme 1; AMP forming, related to firefly luciferase, ligase; HET: AMP; 2.30A {Saccharomyces cerevisiae} SCOP: e.23.1.1
Probab=67.65 E-value=51 Score=32.18 Aligned_cols=100 Identities=15% Similarity=0.153 Sum_probs=73.7
Q ss_pred CCCCeEEEEecCCCCCCCceEEeecHHHHHHhhhhhhhhhhccccCCCCCEEEEeCChhhHHHHHHHHHhhhcCcEEEEe
Q 014951 125 KKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFW 204 (415)
Q Consensus 125 ~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~vv~~ 204 (415)
.++.+|++... ...| ....+|.+.+...+..+...+.. .....++|++..++|..- -....+++++..|+..+.+
T Consensus 95 ~pd~~Al~~~~-~~~~--~~~~~TY~eL~~~v~~lA~~L~~-~~Gv~~Gd~V~i~~~~~~-e~v~a~lA~~~~Gav~vpl 169 (663)
T 1ry2_A 95 TPNKKAIIFEG-DEPG--QGYSITYKELLEEVCQVAQVLTY-SMGVRKGDTVAVYMPMVP-EAIITLLAISRIGAIHSVV 169 (663)
T ss_dssp CTTSEEEEEEC-SSTT--CCEEEEHHHHHHHHHHHHHHHHH-TSCCCTTCEEEECCCSSH-HHHHHHHHHHHTTCEEEEC
T ss_pred CCCceEEEEEc-CCCC--ceEEEEHHHHHHHHHHHHHHHHH-hcCCCCCCEEEEEcCCCH-HHHHHHHHHHHcCCEEEee
Confidence 45677776432 2222 23579999999888887776530 236789999999999764 3344578889999998887
Q ss_pred CC--CHHHHHHHHHhhCCeEEEeCcHH
Q 014951 205 RG--DVRYLMEDIQELKPTMFSGVPRV 229 (415)
Q Consensus 205 ~~--~~~~~~~~i~~~~~t~~~~~P~~ 229 (415)
.. .++++...++..++.++++....
T Consensus 170 ~~~~~~~~l~~~l~~~~~~~li~~~~~ 196 (663)
T 1ry2_A 170 FAGFSSNSLRDRINDGDSKVVITTDES 196 (663)
T ss_dssp CTTSCHHHHHHHHHHHTCSEEEEESBC
T ss_pred CCCCCHHHHHHHHHhcCCeEEEEcccc
Confidence 65 88999999999999999886643
No 53
>3ipl_A 2-succinylbenzoate--COA ligase; structural genomics, acyl-protein synthetase, PSI-2, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=66.66 E-value=30 Score=32.35 Aligned_cols=86 Identities=7% Similarity=-0.057 Sum_probs=63.2
Q ss_pred CCCCCCCeEEEEcCCcH-hHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEcCCChhhhhhcCccCCCCcc
Q 014951 4 RGVNPGDRCGIYGSNCP-EWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLK 82 (415)
Q Consensus 4 ~Gv~~gd~V~l~~~n~~-~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~ 82 (415)
.++.++|++...+|-.- --+..+++++..|+.++..+ ..+++.+...+++.++.+++........+.+........++
T Consensus 199 ~~~~~~d~~l~~~p~~~~~g~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~lr 277 (501)
T 3ipl_A 199 LGFDRDTNWLSVLPIYHISGLSVLLRAVIEGFTVRIVD-KFNAEQILTMIKNERITHISLVPQTLNWLMQQGLHEPYNLQ 277 (501)
T ss_dssp TCCCTTCEEEECSCTTSHHHHHHHHHHHHHTCEEEECS-SCCHHHHHHHHHHSCCCEEEECHHHHHHHHHHTCCSCTTCC
T ss_pred hCCCccCEEEEeCcHHHHHHHHHHHHHHHcCceEEeCC-CCCHHHHHHHHHHcCCcEEEchHHHHHHHHhcCCCCcCccc
Confidence 57889999999888642 22334677888999988775 47899999999999999999988777766654433323566
Q ss_pred EEEEecCC
Q 014951 83 TIVSFANV 90 (415)
Q Consensus 83 ~v~~~~~~ 90 (415)
.++.-+..
T Consensus 278 ~i~~gG~~ 285 (501)
T 3ipl_A 278 KILLGGAK 285 (501)
T ss_dssp EEEECSSC
T ss_pred EEEEeCCC
Confidence 66665544
No 54
>4fuq_A Malonyl COA synthetase; ANL superfamily, methylma malonate, ligase; HET: MSE; 1.70A {Rhodopseudomonas palustris} PDB: 4fut_A* 4gxr_A* 4gxq_A*
Probab=66.03 E-value=49 Score=30.92 Aligned_cols=84 Identities=13% Similarity=0.047 Sum_probs=66.6
Q ss_pred EeecHHHHHHhhhhhhhhhhccccCCCCCEEEEeCChhhHHHHHHHHHhhhcCcEEEEeCC--CHHHHHHHHHhhCCeEE
Q 014951 146 VLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTMF 223 (415)
Q Consensus 146 ~~th~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~vv~~~~--~~~~~~~~i~~~~~t~~ 223 (415)
.+|...+...+..+...+.. ....++|++...++-+. -....+++++..|+..+.... ..+++...++..++..+
T Consensus 28 ~~Ty~eL~~~~~~lA~~L~~--~Gv~~gd~V~i~~~~~~-~~~~~~lA~~~~Ga~~vpl~~~~~~~~l~~il~~~~~~~v 104 (503)
T 4fuq_A 28 KISYAELVARAGRVANVLVA--RGLQVGDRVAAQTEKSV-EALVLYLATVRAGGVYLPLNTAYTLHELDYFITDAEPKIV 104 (503)
T ss_dssp EEEHHHHHHHHHHHHHHHHH--TTCCTTCEEEEECCSCH-HHHHHHHHHHHTTCEEEECCTTCCHHHHHHHHHHHCCSEE
T ss_pred EEEHHHHHHHHHHHHHHHHH--cCCCCCCEEEEECCCCH-HHHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHhcCCcEE
Confidence 58999999888877765532 36789999999888763 334457788999999998876 88999999999999999
Q ss_pred EeCcHHHHH
Q 014951 224 SGVPRVYDR 232 (415)
Q Consensus 224 ~~~P~~~~~ 232 (415)
.+.+.....
T Consensus 105 i~~~~~~~~ 113 (503)
T 4fuq_A 105 VCDPSKRDG 113 (503)
T ss_dssp EECGGGTTT
T ss_pred EECchhhHH
Confidence 998765543
No 55
>3c5e_A Acyl-coenzyme A synthetase ACSM2A, mitochondrial; middle-chain acyl-COA synthetase, xenobiotic/medium-chain FA COA ligase; HET: ATP; 1.60A {Homo sapiens} PDB: 2vze_A 3b7w_A* 3day_A* 3eq6_A* 3eyn_A* 3gpc_A* 2wd9_A*
Probab=64.85 E-value=83 Score=29.95 Aligned_cols=102 Identities=12% Similarity=0.076 Sum_probs=74.4
Q ss_pred CCCCeEEEEecCCCCCCCceEEeecHHHHHHhhhhhhhhhhccc-cCCCCCEEEEeCChhhHHHHHHHHHhhhcCcEEEE
Q 014951 125 KKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGK-VCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGF 203 (415)
Q Consensus 125 ~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~~~~~~~~~~~~-~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~vv~ 203 (415)
.++.++++.... .| ....+|...+...+..+...+. .. .+.++|++...++-+. -....+++++..|+..+.
T Consensus 56 ~p~~~al~~~~~--~g--~~~~~Ty~el~~~~~~lA~~L~--~~~Gv~~gd~V~i~~~n~~-e~~~~~lA~~~~Ga~~vp 128 (570)
T 3c5e_A 56 RPPSPALWWVNG--KG--KELMWNFRELSENSQQAANVLS--GACGLQRGDRVAVVLPRVP-EWWLVILGCIRAGLIFMP 128 (570)
T ss_dssp SCCCEEEEEECS--SS--CEEEEEHHHHHHHHHHHHHHHH--TTTCCCTTCEEEEECCSCH-HHHHHHHHHHHHTCEEEE
T ss_pred CCCceEEEEEcC--CC--ceeEEeHHHHHHHHHHHHHHHH--HccCCCCCCEEEEEcCCCH-HHHHHHHHHHHcCeEEEe
Confidence 356677664321 11 2357999999888877766542 22 5678999999888653 233457788899999988
Q ss_pred eCC--CHHHHHHHHHhhCCeEEEeCcHHHHHH
Q 014951 204 WRG--DVRYLMEDIQELKPTMFSGVPRVYDRI 233 (415)
Q Consensus 204 ~~~--~~~~~~~~i~~~~~t~~~~~P~~~~~l 233 (415)
... .++++...++..++..++..+.....+
T Consensus 129 l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~ 160 (570)
T 3c5e_A 129 GTIQMKSTDILYRLQMSKAKAIVAGDEVIQEV 160 (570)
T ss_dssp CCTTCCHHHHHHHHHHHTCSEEEEETTTHHHH
T ss_pred cCCCCCHHHHHHHHHhcCCeEEEechHHHHHH
Confidence 876 788999999999999999887766554
No 56
>3etc_A AMP-binding protein; adenylate-forming acyl-COA synthetase ligase, ligase; HET: PGE 1PE EPE; 2.10A {Methanosarcina acetivorans}
Probab=63.38 E-value=56 Score=31.22 Aligned_cols=97 Identities=11% Similarity=-0.024 Sum_probs=73.2
Q ss_pred CCCCeEEEEecCCCCCCCceEEeecHHHHHHhhhhhhhhhhccccCCCCCEEEEeCChhhHHHHHHHHHhhhcCcEEEEe
Q 014951 125 KKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFW 204 (415)
Q Consensus 125 ~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~vv~~ 204 (415)
.++.+|++..... | ....+|...+......+...+. ...+.++|++..+++-+.. ....+++++..|+..+..
T Consensus 69 ~pd~~Al~~~~~~--g--~~~~~Ty~eL~~~~~~~A~~L~--~~Gv~~Gd~V~l~~~~~~e-~~~~~lA~~~~Gav~vpl 141 (580)
T 3etc_A 69 SPEKLAMIWCDDY--G--NEKIFTFKDLKYYSDKAANFFV--KHGIGKGDYVMLTLKSRYD-FWYCMLGLHKLGAIAVPA 141 (580)
T ss_dssp CTTCEEEEEEESS--S--CEEEEEHHHHHHHHHHHHHHHH--HTTCCTTCEEEEECTTCTH-HHHHHHHHHHHTCEEEEC
T ss_pred CCCCEEEEEEcCC--C--CEeEEeHHHHHHHHHHHHHHHH--HcCCCCCCEEEEEcCCCHH-HHHHHHHHHhCCEEEEeC
Confidence 4677887654321 1 2467999999988887776553 2367899999999887642 334577889999999888
Q ss_pred CC--CHHHHHHHHHhhCCeEEEeCcH
Q 014951 205 RG--DVRYLMEDIQELKPTMFSGVPR 228 (415)
Q Consensus 205 ~~--~~~~~~~~i~~~~~t~~~~~P~ 228 (415)
.. .+.++...++..++..+.+.+.
T Consensus 142 ~~~~~~~~l~~~l~~~~~~~ii~~~~ 167 (580)
T 3etc_A 142 THMLKTRDIVYRIEKAGLKMIVCIAE 167 (580)
T ss_dssp CTTCCHHHHHHHHHHHTCCEEEEESS
T ss_pred CccCCHHHHHHHHHhcCCCEEEEecc
Confidence 66 8899999999999999888654
No 57
>2v7b_A Benzoate-coenzyme A ligase; benzoate oxidation, benzoate COA ligase; 1.84A {Burkholderia xenovorans}
Probab=61.57 E-value=46 Score=31.28 Aligned_cols=87 Identities=3% Similarity=-0.137 Sum_probs=68.0
Q ss_pred EEeecHHHHHHhhhhhhhhhhccccCCCCCEEEEeCChhhHHHHHHHHHhhhcCcEEEEeCC--CHHHHHHHHHhhCCeE
Q 014951 145 VVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTM 222 (415)
Q Consensus 145 v~~th~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~vv~~~~--~~~~~~~~i~~~~~t~ 222 (415)
..+|...+...+..+...+. .....++|++...++-+.. ....+++++..|+..+.... .+.++...++..++..
T Consensus 47 ~~~Ty~el~~~~~~lA~~L~--~~Gv~~gd~V~i~~~n~~~-~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~ 123 (529)
T 2v7b_A 47 GSTTYGELEERARRFASALR--TLGVHPEERILLVMLDTVA-LPVAFLGALYAGVVPVVANTLLTPADYVYMLTHSHARA 123 (529)
T ss_dssp CEEEHHHHHHHHHHHHHHHH--HTTCCTTCEEEEECCSSTH-HHHHHHHHHHHTCEEEECCTTCCHHHHHHHHHHHTCSE
T ss_pred CCccHHHHHHHHHHHHHHHH--HcCCCCCCEEEEEcCCcHH-HHHHHHHHHHcCceEEecCcccCHHHHHHHHhccCCeE
Confidence 36899999988887776553 2367889999998887642 33457788899999888876 8899999999999999
Q ss_pred EEeCcHHHHHHH
Q 014951 223 FSGVPRVYDRIY 234 (415)
Q Consensus 223 ~~~~P~~~~~l~ 234 (415)
++..+.....+.
T Consensus 124 vi~~~~~~~~~~ 135 (529)
T 2v7b_A 124 VIASGALVQNVT 135 (529)
T ss_dssp EEEEGGGHHHHH
T ss_pred EEechhhhhHHH
Confidence 999887765543
No 58
>4dg8_A PA1221; ANL superfamily, adenylation domain, peptidyl carrier protei ribosomal peptide synthetase, NRPS, valine adenylation, LIG; HET: AMP; 2.15A {Pseudomonas aeruginosa} PDB: 4dg9_A*
Probab=61.31 E-value=30 Score=33.53 Aligned_cols=89 Identities=11% Similarity=0.089 Sum_probs=65.9
Q ss_pred CCCCCCCeEEEEcCCcHhH-HHHHHHHHHcCCEEEecC-CCCCHHHHHHHHHhcCceEEEEcCCChhhhhhcCccCCCCc
Q 014951 4 RGVNPGDRCGIYGSNCPEW-IIAMEACNSQAITYVPLY-DTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYL 81 (415)
Q Consensus 4 ~Gv~~gd~V~l~~~n~~~~-~~~~lA~~~~G~~~~~l~-~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~ 81 (415)
.++.++|++...++-+.+. +..+++.+..|+.++..+ ...+++.+...+++.++.+++........+.+......+.+
T Consensus 199 ~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~i~~~~vt~~~~~Ps~~~~l~~~~~~~l~~l 278 (620)
T 4dg8_A 199 LAFAPQMRFLVNSPLSFDAATLEIWGALLNGGCCVLNDLGPLDPGVLRQLIGERGADSAWLTASLFNTLVDLDPDCLGGL 278 (620)
T ss_dssp GTTCTTCEEEECSCTTSTHHHHHHHHHHTTTCEEEECCSSSCCHHHHHHHHHTTCCCEEEEEHHHHHHHHHHCGGGGTTC
T ss_pred hCCCCCCEEEEECccCHHHHHHHHHHHHhcCCEEEeCccccCCHHHHHHHHHHhCCcEEEccHHHHHHHHhcChhhCCCc
Confidence 4788999999998876443 334678888898887763 35788999999999999999988877666655444444677
Q ss_pred cEEEEecCCCc
Q 014951 82 KTIVSFANVSS 92 (415)
Q Consensus 82 ~~v~~~~~~~~ 92 (415)
+.++.-++...
T Consensus 279 r~v~~gGe~l~ 289 (620)
T 4dg8_A 279 RQLLTGGDILS 289 (620)
T ss_dssp SEEEEESSCCC
T ss_pred cEEEEEeCcCC
Confidence 77777666543
No 59
>3r44_A Fatty acyl COA synthetase FADD13 (fatty-acyl-COA synthetase); ligase; HET: HIS; 1.80A {Mycobacterium tuberculosis} PDB: 3t5c_A 3t5b_A
Probab=60.22 E-value=64 Score=30.24 Aligned_cols=98 Identities=7% Similarity=-0.129 Sum_probs=73.5
Q ss_pred CCCeEEEEecCCCCCCCceEEeecHHHHHHhhhhhhhhhhccccCCCCCEEEEeCChhhHHHHHHHHHhhhcCcEEEEeC
Q 014951 126 KTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWR 205 (415)
Q Consensus 126 ~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~vv~~~ 205 (415)
++.++++.. + +...+|...+...+..+...+.. ..+.++|++..+++-+. -....+++++..|+..+...
T Consensus 30 p~~~A~~~~--~-----~~~~~Ty~eL~~~~~~lA~~L~~--~Gv~~gd~V~i~~~~~~-~~~~~~lA~~~~G~~~vpl~ 99 (517)
T 3r44_A 30 PRLQAYVEP--S-----TDVRMTYAQMNALANRCADVLTA--LGIAKGDRVALLMPNSV-EFCCLFYGAAKLGAVAVPIN 99 (517)
T ss_dssp TTSEEEEEG--G-----GTEEEEHHHHHHHHHHHHHHHHH--TTCCTTCEEEEECCSSH-HHHHHHHHHHHHTCEEEECC
T ss_pred CCCeEEEeC--C-----cCceeeHHHHHHHHHHHHHHHHH--cCCCCcCEEEEEcCCCH-HHHHHHHHHHHhCcEEEecC
Confidence 566676542 1 12479999999888877765532 36789999999988653 33445778899999999887
Q ss_pred C--CHHHHHHHHHhhCCeEEEeCcHHHHHH
Q 014951 206 G--DVRYLMEDIQELKPTMFSGVPRVYDRI 233 (415)
Q Consensus 206 ~--~~~~~~~~i~~~~~t~~~~~P~~~~~l 233 (415)
. ..+++...++..++..+...+.....+
T Consensus 100 ~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~ 129 (517)
T 3r44_A 100 TRLAAPEVSFILSDSGSKVVIYGAPSAPVI 129 (517)
T ss_dssp TTSCHHHHHHHHHHHTCSEEEECGGGHHHH
T ss_pred cccCHHHHHHHHHhcCceEEEECCchHHHH
Confidence 6 889999999999999999887765544
No 60
>1pg4_A Acetyl-COA synthetase; AMP-forming, adenylate-forming, thioester-forming, ligase; HET: COA PRX; 1.75A {Salmonella enterica} SCOP: e.23.1.1 PDB: 1pg3_A* 2p2f_A* 2p2b_A* 2p2q_A* 2p2j_A* 2p20_A* 2p2m_A*
Probab=59.49 E-value=82 Score=30.62 Aligned_cols=97 Identities=9% Similarity=0.101 Sum_probs=71.5
Q ss_pred CCCeEEEEecCCCCCCCceEEeecHHHHHHhhhhhhhhhhccccCCCCCEEEEeCChhhHHHHHHHHHhhhcCcEEEEeC
Q 014951 126 KTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWR 205 (415)
Q Consensus 126 ~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~vv~~~ 205 (415)
++.+|++.. +..+| ....+|...+...+..+...+.. .+..++|++..++|...- ....+++++..|+..+.+.
T Consensus 90 pd~~Al~~~-~~~~~--~~~~lTY~eL~~~v~~lA~~L~~--~Gv~~Gd~V~i~~~~~~e-~vva~lA~~~~Gav~vpl~ 163 (652)
T 1pg4_A 90 GDRTAIIWE-GDDTS--QSKHISYRELHRDVCRFANTLLD--LGIKKGDVVAIYMPMVPE-AAVAMLACARIGAVHSVIF 163 (652)
T ss_dssp TTSEEEEEE-CSSTT--CEEEEEHHHHHHHHHHHHHHHHH--HTCCTTCEEEEECCSSHH-HHHHHHHHHHHTCEEEECC
T ss_pred CCceEEEEE-cCCCC--ceeEEeHHHHHHHHHHHHHHHHH--cCCCCCCEEEEEeCCCHH-HHHHHHHHHHcCcEEEecC
Confidence 566776643 22222 24579999999888877765532 367899999999987642 3445788889999988876
Q ss_pred C--CHHHHHHHHHhhCCeEEEeCcH
Q 014951 206 G--DVRYLMEDIQELKPTMFSGVPR 228 (415)
Q Consensus 206 ~--~~~~~~~~i~~~~~t~~~~~P~ 228 (415)
. .++++...++..++..+++...
T Consensus 164 ~~~~~~~l~~~l~~~~~~~li~~~~ 188 (652)
T 1pg4_A 164 GGFSPEAVAGCIIDSSSRLVITADE 188 (652)
T ss_dssp TTSCHHHHHHHHHHHTCSEEEEESE
T ss_pred CCCCHHHHHHHHHhcCCCEEEEcCc
Confidence 5 8899999999999999887654
No 61
>4h1h_A LMO1638 protein; MCCF-like, csgid, MCCF homolog, structural genomics, niaid, institute of allergy and infectious diseases; 2.46A {Listeria monocytogenes}
Probab=58.55 E-value=37 Score=29.81 Aligned_cols=60 Identities=8% Similarity=-0.003 Sum_probs=39.7
Q ss_pred CCCCCCeEEEEcCCcH------hHHHHHHH-HHHcCCEEEecCCC------------CCHHHHHHHHHhcCceEEEEcC
Q 014951 5 GVNPGDRCGIYGSNCP------EWIIAMEA-CNSQAITYVPLYDT------------LGANAVEFIINHAEVSIAFVQE 64 (415)
Q Consensus 5 Gv~~gd~V~l~~~n~~------~~~~~~lA-~~~~G~~~~~l~~~------------~~~~~l~~~l~~~~~~~ii~~~ 64 (415)
-+++||+|+|++|.+. +-+-.... +-..|..++.-... .-++++...+.+-++++|++..
T Consensus 8 ~L~~GD~I~ivaPSs~~~~~~~~~~~~~~~~L~~~G~~v~~~~~~~~~~~~~agtd~~Ra~dL~~a~~Dp~i~aI~~~r 86 (327)
T 4h1h_A 8 KLKQGDEIRIIAPSRSIGIMADNQVEIAVNRLTDMGFKVTFGEHVAEMDCMMSSSIRSRVADIHEAFNDSSVKAILTVI 86 (327)
T ss_dssp CCCTTCEEEEECSSSCGGGSCHHHHHHHHHHHHHTTCEEEECTTTTCCCTTSSCCHHHHHHHHHHHHHCTTEEEEEESC
T ss_pred CCCCCCEEEEEeCCCCcCccCHHHHHHHHHHHHhCCCEEEECcchhhccCcccCCHHHHHHHHHHHhhCCCCCEEEEcC
Confidence 4899999999999752 22222222 23568777643221 1235688888899999999975
No 62
>3hgu_A EHPF; phenazine, antibiotic, biosynthetic protein; 1.95A {Pantoea agglomerans} PDB: 3hgv_A 3l2k_A*
Probab=58.39 E-value=26 Score=31.14 Aligned_cols=68 Identities=9% Similarity=0.048 Sum_probs=46.8
Q ss_pred ccCCCCCCCeEEEEcCCc--HhHHHHHHHHHHcCCEEEecCCCCCHH-----------------------HHHHHHHhcC
Q 014951 2 RSRGVNPGDRCGIYGSNC--PEWIIAMEACNSQAITYVPLYDTLGAN-----------------------AVEFIINHAE 56 (415)
Q Consensus 2 ~~~Gv~~gd~V~l~~~n~--~~~~~~~lA~~~~G~~~~~l~~~~~~~-----------------------~l~~~l~~~~ 56 (415)
...|+.++|++..+++-+ .--....+++...|+.+++. ..++. .+...+++.+
T Consensus 128 ~~~~~~~~d~~l~~~p~g~~~~g~~~~~~~~~~G~~v~~~--~~dp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 205 (369)
T 3hgu_A 128 QHRPGRPSGNTLAAIPTGPHIVGAINKERALRLGGMFFSI--DIDPRWVKRSLSEGDTATVRKYTHHLVDQVQNTLMNQD 205 (369)
T ss_dssp TTSTTCCCCEEEECSCCTTCHHHHHHHHHHHHTTSCEECC--CCCHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHSC
T ss_pred HhhCCCCcceEEEecCCCchhhhHHHHHHHHHcCCEEECc--cCChHHHHHhhcccchhhhHHHHHHHHHHHHHHHHhCC
Confidence 346889999999998862 22334445558899955543 33444 6666889999
Q ss_pred ceEEEEcCCChhhhh
Q 014951 57 VSIAFVQENKIPSIL 71 (415)
Q Consensus 57 ~~~ii~~~~~~~~~~ 71 (415)
+.+++........+.
T Consensus 206 ~t~l~~~Ps~~~~l~ 220 (369)
T 3hgu_A 206 IRFLVTTPPVLRELL 220 (369)
T ss_dssp EEEEEECHHHHHHHT
T ss_pred CCEEEeCHHHHHHHH
Confidence 999998776555443
No 63
>3tsy_A Fusion protein 4-coumarate--COA ligase 1, resvera synthase; transferase; 3.10A {Arabidospis thaliana}
Probab=58.19 E-value=37 Score=34.96 Aligned_cols=100 Identities=14% Similarity=0.044 Sum_probs=74.7
Q ss_pred CCCCeEEEEecCCCCCCCceEEeecHHHHHHhhhhhhhhhhccccCCCCCEEEEeCChhhHHHHHHHHHhhhcCcEEEEe
Q 014951 125 KKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFW 204 (415)
Q Consensus 125 ~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~vv~~ 204 (415)
.++.+|++.. .+| ..+|...+......+...+.. ....++|++..+++-+. -....+++++..|+..+..
T Consensus 74 ~pd~~Al~~~---~~~----~~~TY~eL~~~~~~lA~~L~~--~Gv~~gd~V~i~~~ns~-e~~v~~lA~~~~Ga~~vpl 143 (979)
T 3tsy_A 74 FATKPCLING---PTG----HVYTYSDVHVISRQIAANFHK--LGVNQNDVVMLLLPNCP-EFVLSFLAASFRGATATAA 143 (979)
T ss_dssp TTTSEEEEET---TTC----CEEEHHHHHHHHHHHHHHHHH--TTCCTTCEEEEECSSCH-HHHHHHHHHHHHTCEEEEE
T ss_pred CCCCeEEEEC---CCC----cEEEHHHHHHHHHHHHHHHHH--cCCCCcCEEEEEeCCCH-HHHHHHHHHHHcCCEEEee
Confidence 4677776542 222 468999998888877665432 36789999999988763 3344577889999999988
Q ss_pred CC--CHHHHHHHHHhhCCeEEEeCcHHHHHHH
Q 014951 205 RG--DVRYLMEDIQELKPTMFSGVPRVYDRIY 234 (415)
Q Consensus 205 ~~--~~~~~~~~i~~~~~t~~~~~P~~~~~l~ 234 (415)
.. .++++...++..++..++..+.....+.
T Consensus 144 ~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~ 175 (979)
T 3tsy_A 144 NPFFTPAEIAKQAKASNTKLIITEARYVDKIK 175 (979)
T ss_dssp CTTSCHHHHHHHHHHHTEEEEEECSTTTTTSH
T ss_pred CCCCCHHHHHHHHHHcCCeEEEEChHHHHHHH
Confidence 76 8899999999999999998876655443
No 64
>3sr3_A Microcin immunity protein MCCF; csgid, structural genomics, MCCF protein, center for structu genomics of infectious diseases, immune system; 1.50A {Bacillus anthracis} PDB: 3gjz_A 3t5m_A* 3u1b_A* 3tyx_A*
Probab=56.27 E-value=43 Score=29.55 Aligned_cols=61 Identities=18% Similarity=0.221 Sum_probs=40.4
Q ss_pred CCCCCCeEEEEcCCcH------hHHHHHHHH-HHcCCEEEecCCC------------CCHHHHHHHHHhcCceEEEEcCC
Q 014951 5 GVNPGDRCGIYGSNCP------EWIIAMEAC-NSQAITYVPLYDT------------LGANAVEFIINHAEVSIAFVQEN 65 (415)
Q Consensus 5 Gv~~gd~V~l~~~n~~------~~~~~~lA~-~~~G~~~~~l~~~------------~~~~~l~~~l~~~~~~~ii~~~~ 65 (415)
-+++||+|+|++|.+. +-+-..... -..|..++.-... .-+++|...+.+-++++|++..-
T Consensus 9 ~L~~GD~I~ivaPSs~~~~~~~~~~~~~~~~L~~~G~~v~~~~~~~~~~~~~ag~d~~Ra~dL~~a~~Dp~i~aI~~~rG 88 (336)
T 3sr3_A 9 SLKYGDTIGIYSPSSPVTYTSPKRFERAKSYLLQKGFHILEGSLTGRYDYYRSGSIQERAKELNALIRNPNVSCIMSTIG 88 (336)
T ss_dssp CCCTTCEEEEECSSSCHHHHCHHHHHHHHHHHHHTTCEEEECTTTTCCBTTBSSCHHHHHHHHHHHHHCTTEEEEEESCC
T ss_pred CCCCCCEEEEEeCCCCccccCHHHHHHHHHHHHhCCCEEEEcccccccccccCCCHHHHHHHHHHHhhCCCCCEEEEccc
Confidence 4899999999999873 222222322 3478877743211 12356888888889999999753
No 65
>3tbh_A O-acetyl serine sulfhydrylase; cysteine synthase, type II PLP dependent enzyme, serine ACET transferase; HET: LLP; 1.68A {Leishmania donovani} PDB: 3spx_A* 3t4p_A* 4air_A*
Probab=56.15 E-value=25 Score=31.01 Aligned_cols=60 Identities=5% Similarity=-0.032 Sum_probs=45.9
Q ss_pred CCCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEcCC
Q 014951 6 VNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQEN 65 (415)
Q Consensus 6 v~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~ii~~~~ 65 (415)
+++|++|.+....+-.-..+.++|...|..++.+-|...+..-...++..++++++++..
T Consensus 68 l~~g~~vvv~aSsGN~g~alA~aa~~~G~~~~iv~p~~~~~~k~~~~~~~GA~V~~~~~~ 127 (334)
T 3tbh_A 68 LIPGKSIVVESSSGNTGVSLAHLGAIRGYKVIITMPESMSLERRCLLRIFGAEVILTPAA 127 (334)
T ss_dssp CCTTTCEEEEECSSHHHHHHHHHHHHHTCEEEEEEETTSCHHHHHHHHHTTCEEEEECGG
T ss_pred CCCCCeEEEEeCCCHHHHHHHHHHHHhCCCEEEEECCCCCHHHHHHHHHCCCEEEEECCC
Confidence 488888655555577777778888888998887766655566667889999999999754
No 66
>3kxw_A Saframycin MX1 synthetase B; fatty acid AMP ligase, SGX, acyl adenylate, structural genom 2, protein structure initiative; HET: 1ZZ; 1.85A {Legionella pneumophila subsp} PDB: 3lnv_A*
Probab=55.87 E-value=1.2e+02 Score=28.75 Aligned_cols=102 Identities=8% Similarity=0.017 Sum_probs=73.8
Q ss_pred CCCCeEEEEecCCCCCCCceEEeecHHHHHHhhhhhhhhhhccccCCCCCEEEEeCChhhHHHHHHHHHhhhcCcEEEEe
Q 014951 125 KKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFW 204 (415)
Q Consensus 125 ~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~vv~~ 204 (415)
.++.++++.... -..-.+|.+.+...+..+...+.. ....++|++...++-+.. ....+++++..|+..+..
T Consensus 24 ~p~~~a~~~~~~-----~~~~~~Ty~eL~~~~~~lA~~L~~--~gv~~gd~V~i~~~~~~~-~~~~~lA~~~~G~~~vpl 95 (590)
T 3kxw_A 24 SPNKKSCTFLNK-----ELEETMTYEQLDQHAKAIAATLQA--EGAKPGDRVLLLFAPGLP-LIQAFLGCLYAGCIAVPI 95 (590)
T ss_dssp CTTSEEEEEEET-----TEEEEEEHHHHHHHHHHHHHHHHH--TTCCTTCEEEEECCSSHH-HHHHHHHHHHTTCEEEEE
T ss_pred CCCCeEEEEEcC-----CeeEEEcHHHHHHHHHHHHHHHHH--cCCCCCCEEEEEcCCchh-HHHHHHHHHHhCcEEEEe
Confidence 356677665431 124578999999888877765532 367899999999887642 344577889999999888
Q ss_pred CC-----CHHHHHHHHHhhCCeEEEeCcHHHHHHH
Q 014951 205 RG-----DVRYLMEDIQELKPTMFSGVPRVYDRIY 234 (415)
Q Consensus 205 ~~-----~~~~~~~~i~~~~~t~~~~~P~~~~~l~ 234 (415)
.. ...++...++..++..+...+.....+.
T Consensus 96 ~~~~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~ 130 (590)
T 3kxw_A 96 YPPAQEKLLDKAQRIVTNSKPVIVLMIADHIKKFT 130 (590)
T ss_dssp CCCCSHHHHHHHHHHHHHHCCSEEEECHHHHHHHC
T ss_pred cCCCchHHHHHHHHHHHhCCCCEEEeCHHHHHHHH
Confidence 65 2367788889999999998887766553
No 67
>2d1s_A Luciferase, luciferin 4-monooxygenase; alpha/beta, beta barrel, alpha+beta, riken structural genomics/proteomics initiative, RSGI; HET: SLU; 1.30A {Luciola cruciata} PDB: 2d1q_A* 2d1r_A* 2d1t_A*
Probab=55.82 E-value=45 Score=31.62 Aligned_cols=88 Identities=11% Similarity=0.018 Sum_probs=68.1
Q ss_pred EEeecHHHHHHhhhhhhhhhhccccCCCCCEEEEeCChhhHHHHHHHHHhhhcCcEEEEeCC--CHHHHHHHHHhhCCeE
Q 014951 145 VVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTM 222 (415)
Q Consensus 145 v~~th~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~vv~~~~--~~~~~~~~i~~~~~t~ 222 (415)
..+|...+...+..+...+.. ..+.++|++..+++-+.. .....++++..|+..+.... .++++...++..++..
T Consensus 51 ~~~Ty~el~~~~~~lA~~L~~--~Gv~~gd~V~i~~~n~~e-~~~~~la~~~~Gav~vpl~~~~~~~~l~~~l~~~~~~~ 127 (548)
T 2d1s_A 51 VDYSYAEYLEKSCCLGKALQN--YGLVVDGRIALCSENCEE-FFIPVIAGLFIGVGVAPTNEIYTLRELVHSLGISKPTI 127 (548)
T ss_dssp CEEEHHHHHHHHHHHHHHHHH--HTCCTTCEEEEECSSCTT-THHHHHHHHHHTCEEEEECTTSCHHHHHHHHHHHCCSE
T ss_pred CEeeHHHHHHHHHHHHHHHHH--cCCCCCCEEEEEeCCchh-HHHHHHHHHhhCCEEeccCCCCCHHHHHHHHHhcCCeE
Confidence 368999998888877665532 367899999998886532 23356778889999988876 8899999999999999
Q ss_pred EEeCcHHHHHHHH
Q 014951 223 FSGVPRVYDRIYT 235 (415)
Q Consensus 223 ~~~~P~~~~~l~~ 235 (415)
++..+.....+..
T Consensus 128 vi~~~~~~~~~~~ 140 (548)
T 2d1s_A 128 VFSSKKGLDKVIT 140 (548)
T ss_dssp EEECTTTHHHHHH
T ss_pred EEEcHHHHHHHHH
Confidence 9998877665543
No 68
>3o83_A Peptide arylation enzyme; ligase, adenylation of 2,3-dihydroxybenzoate and transfer to pantetheine cofactor of BASF; HET: IXN; 1.90A {Acinetobacter baumannii} SCOP: e.23.1.0 PDB: 3o82_A* 3o84_A* 3u16_A* 3u17_A*
Probab=55.51 E-value=82 Score=29.72 Aligned_cols=92 Identities=15% Similarity=0.077 Sum_probs=69.1
Q ss_pred CCCCeEEEEecCCCCCCCceEEeecHHHHHHhhhhhhhhhhccccCCCCCEEEEeCChhhHHHHHHHHHhhhcCcEEEEe
Q 014951 125 KKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFW 204 (415)
Q Consensus 125 ~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~vv~~ 204 (415)
.|+.+|++. + .-.+|...+......+...+.. ..+.++|++...++-+. -....+++++..|+..+..
T Consensus 43 ~p~~~Al~~---~------~~~~Ty~eL~~~~~~lA~~L~~--~Gv~~gd~V~i~~~n~~-~~~~~~lA~~~~Gav~vpl 110 (544)
T 3o83_A 43 HPHSLAIIC---G------ERQLSYIELDRLSTNLATRLAE--KGLGKGDTALVQLPNVA-EFYIVFFALLKAGVVVLNA 110 (544)
T ss_dssp CTTSEEEEE---T------TEEEEHHHHHHHHHHHHHHHHH--TTCCTTCEEEECCCSSH-HHHHHHHHHHHHTCEEEEC
T ss_pred CCCceEEEc---C------CCceeHHHHHHHHHHHHHHHHH--CCCCCCCEEEEECCCCH-HHHHHHHHHHHhCcEEecC
Confidence 456777653 1 3468999999888877765532 36789999998887653 3334577888899988877
Q ss_pred CC--CHHHHHHHHHhhCCeEEEeCcH
Q 014951 205 RG--DVRYLMEDIQELKPTMFSGVPR 228 (415)
Q Consensus 205 ~~--~~~~~~~~i~~~~~t~~~~~P~ 228 (415)
.. ...++...++..++..++..+.
T Consensus 111 ~~~~~~~~l~~~l~~~~~~~li~~~~ 136 (544)
T 3o83_A 111 LYSHRQYELNAFIKQIQPKLLIGSRQ 136 (544)
T ss_dssp CTTCCHHHHHHHHHHHCCSEEEEETT
T ss_pred CCCCCHHHHHHHHHhcCeeEEEEccc
Confidence 65 8889999999999999987664
No 69
>3ezx_A MMCP 1, monomethylamine corrinoid protein 1; N terminal all helical bundle C terminal rossmann fold, cobalt, metal-binding; HET: HCB; 2.56A {Methanosarcina barkeri}
Probab=53.67 E-value=65 Score=26.19 Aligned_cols=53 Identities=13% Similarity=-0.031 Sum_probs=37.7
Q ss_pred CCEEEEeCCh--hhHHHHHH-HHHhhhcCcEEEEeCC--CHHHHHHHHHhhCCeEEEe
Q 014951 173 EDTYFSFLPL--AHIYDQII-ETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTMFSG 225 (415)
Q Consensus 173 ~d~~l~~~p~--~~~~~~~~-~~~~l~~G~~vv~~~~--~~~~~~~~i~~~~~t~~~~ 225 (415)
..+++...+- .|..|... ....-..|..++.... .++.+.+.+++++++.+..
T Consensus 92 ~~~vll~~v~gd~HdiG~~iv~~~l~~~G~~Vi~LG~~vp~e~iv~~~~~~~~d~v~l 149 (215)
T 3ezx_A 92 AGLAITFVAEGDIHDIGHRLVTTMLGANGFQIVDLGVDVLNENVVEEAAKHKGEKVLL 149 (215)
T ss_dssp CCEEEEEECTTCCCCHHHHHHHHHHHHTSCEEEECCSSCCHHHHHHHHHHTTTSCEEE
T ss_pred CCeEEEEeCCCChhHHHHHHHHHHHHHCCCeEEEcCCCCCHHHHHHHHHHcCCCEEEE
Confidence 3444444443 47777665 4455667888888754 8999999999999997666
No 70
>4e5s_A MCCFLIKE protein (BA_5613); structural genomics, center for structural genomi infectious diseases, csgid, serine peptidase S66; 1.95A {Bacillus anthracis}
Probab=52.10 E-value=48 Score=29.15 Aligned_cols=60 Identities=8% Similarity=0.020 Sum_probs=40.2
Q ss_pred CCCCCCeEEEEcCCcH------hHHHHHHHHH-HcCCEEEecCCC------------CCHHHHHHHHHhcCceEEEEcC
Q 014951 5 GVNPGDRCGIYGSNCP------EWIIAMEACN-SQAITYVPLYDT------------LGANAVEFIINHAEVSIAFVQE 64 (415)
Q Consensus 5 Gv~~gd~V~l~~~n~~------~~~~~~lA~~-~~G~~~~~l~~~------------~~~~~l~~~l~~~~~~~ii~~~ 64 (415)
-+++||+|+|++|.+. +-+-...+.+ ..|..++.-+.. .-+++|...+.+-++++|++..
T Consensus 8 ~L~~GD~I~ivaPS~~~~~~~~~~~~~~~~~L~~~G~~v~~~~~~~~~~~~~ag~d~~Ra~dL~~a~~Dp~i~aI~~~r 86 (331)
T 4e5s_A 8 KLKKGDEIRVISPSCSLSIVSTENRRLAVKRLTELGFHVTFSTHAEEIDRFASSSISSRVQDLHEAFRDPNVKAILTTL 86 (331)
T ss_dssp CCCTTCEEEEECSSSCGGGSCHHHHHHHHHHHHHTTCEEEECTTTTCCCTTSSCCHHHHHHHHHHHHHCTTEEEEEESC
T ss_pred CCCCcCEEEEEeCCCCccccCHHHHHHHHHHHHhCCCEEEECCchhcccCccCCCHHHHHHHHHHHhhCCCCCEEEEcc
Confidence 4899999999999864 2222223223 478887743321 1235688888888999999975
No 71
>3tla_A MCCF; serine protease, hydrolase; 1.20A {Escherichia coli} PDB: 3tle_A* 3tlg_A 3tlb_A* 3tlc_A* 3tlz_A* 3tly_A
Probab=51.88 E-value=49 Score=29.66 Aligned_cols=60 Identities=13% Similarity=0.180 Sum_probs=39.8
Q ss_pred CCCCCCeEEEEcCCcH------hHHHHHHHH-HHcCCEEEecCCC------------CCHHHHHHHHHhcCceEEEEcC
Q 014951 5 GVNPGDRCGIYGSNCP------EWIIAMEAC-NSQAITYVPLYDT------------LGANAVEFIINHAEVSIAFVQE 64 (415)
Q Consensus 5 Gv~~gd~V~l~~~n~~------~~~~~~lA~-~~~G~~~~~l~~~------------~~~~~l~~~l~~~~~~~ii~~~ 64 (415)
-+++||+|+|++|.+. +-+-..... -..|..++.-+.. .-+++|...+.+-++++|++..
T Consensus 39 ~Lk~GD~I~ivaPSs~~~~~~~~~~~~~~~~L~~~G~~v~~~~~~~~~~~~~agtd~~Ra~dL~~af~Dp~i~aI~~~r 117 (371)
T 3tla_A 39 PLAVGDTIGFFSSSAPATVTAKNRFFRGVEFLQRKGFKLVSGKLTGKTDFYRSGTIKERAQEFNELVYNPDITCIMSTI 117 (371)
T ss_dssp CCCTTCEEEEECSSCCHHHHTHHHHHHHHHHHHHTTCEEEECTTTTCCBTTBSSCHHHHHHHHHHHHTCTTEEEEEESC
T ss_pred CCCCcCEEEEEeCCCCccccCHHHHHHHHHHHHhCCCEEEECCchhcccCccCCCHHHHHHHHHHHhhCCCCCEEEEcc
Confidence 4899999999999873 222222222 3478887743221 1235677788888999999975
No 72
>3vc3_A Beta-cyanoalnine synthase; beta-cyanoalanine synthase, transferase; HET: C6P; 1.77A {Glycine max} PDB: 3vbe_A*
Probab=50.82 E-value=34 Score=30.29 Aligned_cols=60 Identities=8% Similarity=0.009 Sum_probs=49.7
Q ss_pred CCCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEcCC
Q 014951 6 VNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQEN 65 (415)
Q Consensus 6 v~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~ii~~~~ 65 (415)
+++|.+..+....+-.-..+.++|..+|..+..+-|...+..-...++..++++++++..
T Consensus 83 l~~g~~~Vv~aSsGN~g~alA~~aa~~G~~~~IvmP~~~~~~k~~~~~~~GA~Vv~v~~~ 142 (344)
T 3vc3_A 83 ITPGKTTLIEPTSGNMGISMAFMAAMKGYKMVLTMPSYTSLERRVTMRAFGAELILTDPA 142 (344)
T ss_dssp CCTTTCEEEEECSSHHHHHHHHHHHHHTCEEEEEEETTSCHHHHHHHHHTTCEEEEECGG
T ss_pred CCCCCCEEEEeCCcHHHHHHHHHHHHcCCcEEEEECCCChHHHHHHHHHcCCEEEEECCC
Confidence 578877667777778888888999999999888877777777788899999999998753
No 73
>3l8c_A D-alanine--poly(phosphoribitol) ligase subunit 1; structural genomics, DLTA, ATP-binding, cytoplasm, nucleotide-binding; 2.41A {Streptococcus pyogenes serotype M6} PDB: 3lgx_A*
Probab=50.62 E-value=95 Score=28.98 Aligned_cols=81 Identities=9% Similarity=-0.057 Sum_probs=62.0
Q ss_pred EEeecHHHHHHhhhhhhhhhhccccCCCCCEEEEeCChhhHHHHHHHHHhhhcCcEEEEeCC--CHHHHHHHHHhhCCeE
Q 014951 145 VVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTM 222 (415)
Q Consensus 145 v~~th~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~vv~~~~--~~~~~~~~i~~~~~t~ 222 (415)
-.+|...+...+..+...+.. ....++|++...++-+. -....+++++..|+..+.... .++++...++..++..
T Consensus 28 ~~~Ty~el~~~~~~lA~~L~~--~g~~~gd~V~i~~~n~~-~~~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~~~~~~ 104 (521)
T 3l8c_A 28 ERRTYGQLKRDSDSIAAFIDS--LALLAKSPVLVFGAQTY-DMLATFVALTKSGHAYIPVDVHSAPERILAIIEIAKPSL 104 (521)
T ss_dssp EEEEHHHHHHHHHHHHHHHHH--TCCCTTCCEEEEECSSH-HHHHHHHHHHHTTCCEEEEETTSCHHHHHHHHHHSCCSE
T ss_pred CeecHHHHHHHHHHHHHHHHH--cCCCCCCEEEEEeCCCH-HHHHHHHHHHHhCCEEEecCccccHHHHHHHHHhCCCCE
Confidence 358999998888877665432 36778899888877653 334457788999999888765 8899999999999999
Q ss_pred EEeCcH
Q 014951 223 FSGVPR 228 (415)
Q Consensus 223 ~~~~P~ 228 (415)
++....
T Consensus 105 ii~~~~ 110 (521)
T 3l8c_A 105 IIAIEE 110 (521)
T ss_dssp EEESSC
T ss_pred EEecCc
Confidence 887553
No 74
>1mdb_A 2,3-dihydroxybenzoate-AMP ligase; adenylation domain, peptide synthetase, antibiotic biosynthesis, siderophore formation; HET: AMP DBH; 2.15A {Bacillus subtilis} SCOP: e.23.1.1 PDB: 1md9_A* 1mdf_A
Probab=50.49 E-value=69 Score=30.18 Aligned_cols=86 Identities=6% Similarity=-0.174 Sum_probs=61.8
Q ss_pred CCCCCCCeEEEEcCCcH--hHHH-HHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEcCCChhhhhhcC---ccC
Q 014951 4 RGVNPGDRCGIYGSNCP--EWII-AMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCL---PRC 77 (415)
Q Consensus 4 ~Gv~~gd~V~l~~~n~~--~~~~-~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~---~~~ 77 (415)
.++.++|++...+|-+- .+.. .+++++..|+.++..+ ..+++.+...+++.++.+++........+.+.. ...
T Consensus 218 ~~~~~~d~~l~~~p~~h~~~~~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~ 296 (539)
T 1mdb_A 218 CWLDHSTVYLAALPMAHNYPLSSPGVLGVLYAGGRVVLSP-SPSPDDAFPLIEREKVTITALVPPLAMVWMDAASSRRDD 296 (539)
T ss_dssp HTCCTTCEEEECSCTTSHHHHHSSHHHHHHHTTCEEEECS-SSSHHHHHHHHHHHTCSEEEECHHHHHHHHHHHHHCCCC
T ss_pred hCCCCCCEEEEeecccccchhhHHHHHHHHHhCCEEEECC-CCCHHHHHHHHHHcCCeEEEccHHHHHHHHhCccccCCC
Confidence 36889999998888653 3333 4788899999988765 468889999999999999998877665554321 222
Q ss_pred CCCccEEEEecCC
Q 014951 78 CLYLKTIVSFANV 90 (415)
Q Consensus 78 ~~~~~~v~~~~~~ 90 (415)
.+.++.++.-+..
T Consensus 297 l~~lr~~~~gG~~ 309 (539)
T 1mdb_A 297 LSSLQVLQVGGAK 309 (539)
T ss_dssp CTTCCEEEEESSC
T ss_pred ccceeEEEEcCCC
Confidence 3566777666554
No 75
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=49.89 E-value=23 Score=31.29 Aligned_cols=58 Identities=16% Similarity=0.175 Sum_probs=43.6
Q ss_pred cCCCCCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEc
Q 014951 3 SRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQ 63 (415)
Q Consensus 3 ~~Gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~ii~~ 63 (415)
..++++||+|+|...-+.-..++++|....|+.++.++. +++.+ .++....+..+|-.
T Consensus 158 ~~~~~~g~~VlV~GaG~~g~~a~~~a~~~~g~~Vi~~~~--~~~r~-~~~~~~Ga~~~i~~ 215 (348)
T 4eez_A 158 VSGVKPGDWQVIFGAGGLGNLAIQYAKNVFGAKVIAVDI--NQDKL-NLAKKIGADVTINS 215 (348)
T ss_dssp HHTCCTTCEEEEECCSHHHHHHHHHHHHTSCCEEEEEES--CHHHH-HHHHHTTCSEEEEC
T ss_pred ccCCCCCCEEEEEcCCCccHHHHHHHHHhCCCEEEEEEC--cHHHh-hhhhhcCCeEEEeC
Confidence 457899999999998888888888888778888877765 34443 45667777777654
No 76
>3fce_A D-alanine--poly(phosphoribitol) ligase subunit 1; DLTA, AMP-forming domain, adenylation, D-alanine protein ligase, ATP complex; HET: ATP; 1.90A {Bacillus cereus} PDB: 3fcc_A* 3dhv_A*
Probab=48.81 E-value=94 Score=28.95 Aligned_cols=78 Identities=5% Similarity=-0.018 Sum_probs=60.1
Q ss_pred EeecHHHHHHhhhhhhhhhhccccCCCCCEEEEeCChhhHHHHHHHHHhhhcCcEEEEeCC--CHHHHHHHHHhhCCeEE
Q 014951 146 VLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTMF 223 (415)
Q Consensus 146 ~~th~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~vv~~~~--~~~~~~~~i~~~~~t~~ 223 (415)
.+|...+...+..+...+.. ....++|++..+++-+. -....+++++..|+..+.... ..+++...++..++..+
T Consensus 26 ~~Ty~el~~~~~~lA~~L~~--~g~~~gd~V~i~~~n~~-e~~~~~la~~~~G~v~vpl~~~~~~~~l~~il~~~~~~~~ 102 (512)
T 3fce_A 26 KITYKQLKEDSDALAHWISS--EYPDDRSPIMVYGHMQP-EMIINFLGCVKAGHAYIPVDLSIPADRVQRIAENSGAKLL 102 (512)
T ss_dssp EEEHHHHHHHHHHHHHHHHH--HSTTCCCCEEEEESSCH-HHHHHHHHHHHTTCCEEEEETTSCHHHHHHHHHHSCCCEE
T ss_pred eEEHHHHHHHHHHHHHHHHH--hCCCCCCEEEEEeCCCH-HHHHHHHHHHHhCCEEEeeCCCCcHHHHHHHHHhcCCCEE
Confidence 58999998888877665532 25678898888877653 233457788999999888765 88999999999999988
Q ss_pred EeC
Q 014951 224 SGV 226 (415)
Q Consensus 224 ~~~ 226 (415)
+..
T Consensus 103 i~~ 105 (512)
T 3fce_A 103 LSA 105 (512)
T ss_dssp EES
T ss_pred Eec
Confidence 765
No 77
>3gqw_A Fatty acid AMP ligase; FAAL, E. coli, ATP-dependent binding enzyme family,, structural genomics, PSI-2, protein structure initiative; HET: ZZ9; 3.00A {Escherichia coli O6} PDB: 3pbk_A*
Probab=44.04 E-value=1.7e+02 Score=27.59 Aligned_cols=87 Identities=9% Similarity=-0.115 Sum_probs=67.1
Q ss_pred EEeecHHHHHHhhhhhhhhhhccccCCCCCEEEEeCChhhHHHHHHHHHhhhcCcEEEEeCC--C-------HHHHHHHH
Q 014951 145 VVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG--D-------VRYLMEDI 215 (415)
Q Consensus 145 v~~th~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~vv~~~~--~-------~~~~~~~i 215 (415)
-.+|...+...+..+...+.. ....++|++..+++-+. -....+++++..|+..+.... . ..++...+
T Consensus 48 ~~~Ty~eL~~~~~~lA~~L~~--~Gv~~gd~V~i~~~~~~-~~~~~~lA~~~~G~~~vpl~~~~~~~~~~~~~~~l~~~l 124 (576)
T 3gqw_A 48 DQLEYQTLKARAEAGAKRLLS--LNLKKGDRVALIAETSS-EFVEAFFACQYAGLVAVPLAIPMGVGQRDSWSAKLQGLL 124 (576)
T ss_dssp EEEEHHHHHHHHHHHHHHHHH--TCCCTTCEEEEECCSSH-HHHHHHHHHHHTTCEEEEECCCSSSSSHHHHHHHHHHHH
T ss_pred eEEcHHHHHHHHHHHHHHHHH--cCCCCCCEEEEEcCCcH-HHHHHHHHHHHhCCeEeecCCCCcccchhhHHHHHHHHH
Confidence 578999999888877765532 36789999999988764 334457788999999988764 3 67888899
Q ss_pred HhhCCeEEEeCcHHHHHHH
Q 014951 216 QELKPTMFSGVPRVYDRIY 234 (415)
Q Consensus 216 ~~~~~t~~~~~P~~~~~l~ 234 (415)
+..++..+.........+.
T Consensus 125 ~~~~~~~ii~~~~~~~~~~ 143 (576)
T 3gqw_A 125 ASCQPAAIITGDEWLPLVN 143 (576)
T ss_dssp HHHCCSEEEECGGGHHHHH
T ss_pred HhcCCCEEEecHHHHHHHH
Confidence 9999999998887665543
No 78
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=43.50 E-value=49 Score=29.01 Aligned_cols=59 Identities=10% Similarity=0.089 Sum_probs=43.0
Q ss_pred ccCCCCCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEcC
Q 014951 2 RSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQE 64 (415)
Q Consensus 2 ~~~Gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~ii~~~ 64 (415)
...++++||+|+|...-++-.+++++|-. .|+.++.++. +++.+. ++++.+++.++...
T Consensus 160 ~~~~~~~g~~VlV~GaG~vG~~a~qla~~-~Ga~Vi~~~~--~~~~~~-~~~~lGa~~~i~~~ 218 (340)
T 3s2e_A 160 KVTDTRPGQWVVISGIGGLGHVAVQYARA-MGLRVAAVDI--DDAKLN-LARRLGAEVAVNAR 218 (340)
T ss_dssp HTTTCCTTSEEEEECCSTTHHHHHHHHHH-TTCEEEEEES--CHHHHH-HHHHTTCSEEEETT
T ss_pred HHcCCCCCCEEEEECCCHHHHHHHHHHHH-CCCeEEEEeC--CHHHHH-HHHHcCCCEEEeCC
Confidence 34689999999999887788888888774 5888777654 444444 56778888777543
No 79
>1eg5_A Aminotransferase; PLP-dependent enzymes, iron-sulfur-cluster synthesis, C-S BE transferase; HET: PLP; 2.00A {Thermotoga maritima} SCOP: c.67.1.3 PDB: 1ecx_A*
Probab=43.39 E-value=50 Score=29.13 Aligned_cols=57 Identities=4% Similarity=-0.059 Sum_probs=35.9
Q ss_pred CCCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCCC----CCHHHHHHHHHhcCceEEEEc
Q 014951 6 VNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDT----LGANAVEFIINHAEVSIAFVQ 63 (415)
Q Consensus 6 v~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~~----~~~~~l~~~l~~~~~~~ii~~ 63 (415)
.++||.|.+..+..+.+.-..-++...|+.++.++.. .+.+++...++. ++++|+..
T Consensus 86 ~~~gd~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-~~~~v~~~ 146 (384)
T 1eg5_A 86 EKRKRTIITTPIEHKAVLETMKYLSMKGFKVKYVPVDSRGVVKLEELEKLVDE-DTFLVSIM 146 (384)
T ss_dssp TTTCCEEEECTTSCHHHHHHHHHHHHTTCEEEECCBCTTSCBCHHHHHHHCCT-TEEEEEEE
T ss_pred cCCCCEEEECCCCchHHHHHHHHHHhcCCEEEEEccCCCCccCHHHHHHHhCC-CCeEEEEE
Confidence 3688888877766655544444455678777766432 456777766653 56666654
No 80
>3e7w_A D-alanine--poly(phosphoribitol) ligase subunit 1; DLTA, non-ribosomal peptide synthetase, NRPS, adenylation domain, D-alanylation; HET: AMP; 2.28A {Bacillus subtilis} PDB: 3e7x_A*
Probab=42.92 E-value=1.3e+02 Score=27.87 Aligned_cols=80 Identities=6% Similarity=-0.082 Sum_probs=59.1
Q ss_pred EEeecHHHHHHhhhhhhhhhhccccCCCCCEEEEeCChhhHHHHHHHHHhhhcCcEEEEeCC--CHHHHHHHHHhhCCeE
Q 014951 145 VVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTM 222 (415)
Q Consensus 145 v~~th~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~vv~~~~--~~~~~~~~i~~~~~t~ 222 (415)
-.+|...+...+..+...+... ....+++++...++-.. .....+++++..|+..+.... ..+++...++..++..
T Consensus 25 ~~~Ty~eL~~~~~~~A~~L~~~-~~~~~g~~V~i~~~n~~-~~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~ 102 (511)
T 3e7w_A 25 QSLTYQELWEQSDRAAAAIQKR-ISGEKKSPILVYGHMEP-HMIVSFLGSVKAGHPYIPVDLSIPSERIAKIIESSGAEL 102 (511)
T ss_dssp EEEEHHHHHHHHHHHHHHHTTT-SCSSSCCCEEEEESSCH-HHHHHHHHHHHHTCCEEEEETTSCHHHHHHHHHHHTCCE
T ss_pred ceeeHHHHHHHHHHHHHHHHHh-cCCCCCCeEEEEecCCH-HHHHHHHHHHHhCCEEEecCCCChHHHHHHHHHhCCCCE
Confidence 4689999988887776655221 24456788877766542 223457788999999888765 8899999999999999
Q ss_pred EEeC
Q 014951 223 FSGV 226 (415)
Q Consensus 223 ~~~~ 226 (415)
++..
T Consensus 103 li~~ 106 (511)
T 3e7w_A 103 LIHA 106 (511)
T ss_dssp EEES
T ss_pred EEec
Confidence 8863
No 81
>3dzz_A Putative pyridoxal 5'-phosphate-dependent C-S LYA; putative PLP-dependent aminotransferase; HET: MSE LLP PG4; 1.61A {Lactobacillus delbrueckii subsp} SCOP: c.67.1.0
Probab=42.34 E-value=60 Score=28.71 Aligned_cols=56 Identities=9% Similarity=0.064 Sum_probs=40.2
Q ss_pred CCCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCCC-------CCHHHHHHHHHhcCceEEEEcC
Q 014951 6 VNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDT-------LGANAVEFIINHAEVSIAFVQE 64 (415)
Q Consensus 6 v~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~~-------~~~~~l~~~l~~~~~~~ii~~~ 64 (415)
+++||.|.+..+....+ ..++...|+.++.++.. .+.+.+...++..++++|+...
T Consensus 106 ~~~gd~vl~~~~~~~~~---~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~v~i~~ 168 (391)
T 3dzz_A 106 TSPGDQILVQEPVYNMF---YSVIEGNGRRVISSDLIYENSKYSVNWADLEEKLATPSVRMMVFCN 168 (391)
T ss_dssp SCTTCEEEECSSCCHHH---HHHHHHTTCEEEECCCEEETTEEECCHHHHHHHHTSTTEEEEEEES
T ss_pred CCCCCeEEECCCCcHHH---HHHHHHcCCEEEEeeeeecCCceeecHHHHHHHHhccCceEEEEEC
Confidence 46899988777665554 34566788888777653 6788999988767788776543
No 82
>3ite_A SIDN siderophore synthetase; ligase, non-ribosomal peptide synthesis, NRPS, sidna3, fungal, endophyte; HET: MSE; 2.00A {Neotyphodium lolii}
Probab=41.91 E-value=2.3e+02 Score=26.68 Aligned_cols=99 Identities=9% Similarity=-0.072 Sum_probs=68.8
Q ss_pred CCCCeEEEEecCCCCCCC--ceEEeecHHHHHHhhhhhhhhhhccccCCCCCEEEEeCChhhHHHHHHHHHhhhcCcEEE
Q 014951 125 KKTNISTIMYTSGTTGEP--KGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIG 202 (415)
Q Consensus 125 ~~~~~~~i~~TSGtTG~p--K~v~~th~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~vv 202 (415)
.|+.+|++... +..+.. ..-.+|.+.+...+..+...+.. ... ++|++...++-+. -....+++++..|+..+
T Consensus 33 ~p~~~A~~~~~-~~~~~~~~~~~~~Ty~eL~~~~~~lA~~L~~--~g~-~gd~V~i~~~n~~-~~~~~~lA~~~~Gav~v 107 (562)
T 3ite_A 33 HPEWKAVEVAT-GFLGSQKIVTEDWTYKKLNETANQVANLIIH--ASL-HGRAIAVSLDRSL-IAFAIIVGIMKSGNTYV 107 (562)
T ss_dssp CTTSEEEEEEE-CC-----CEEEEEEHHHHHHHHHHHHHHHHH--TTC-SSCEEEEECCSCH-HHHHHHHHHHHTTCEEE
T ss_pred CCCchhhhccc-ccccccccccCCCCHHHHHHHHHHHHHHHHh--cCC-CCCEEEEEeCCCH-HHHHHHHHHHHhCCEEE
Confidence 35667765443 222222 23578999999888887765532 244 6899998888764 23345778899999999
Q ss_pred EeCC--CHHHHHHHHHhhCCeEEEeCcH
Q 014951 203 FWRG--DVRYLMEDIQELKPTMFSGVPR 228 (415)
Q Consensus 203 ~~~~--~~~~~~~~i~~~~~t~~~~~P~ 228 (415)
.... .+.++...++..++..++....
T Consensus 108 pl~~~~~~~~l~~~l~~~~~~~~i~~~~ 135 (562)
T 3ite_A 108 PIEAGLPNDRKSFLLRDSRAAMAFVCDN 135 (562)
T ss_dssp ECCTTSCHHHHHHHHHHHTCSEEEECTT
T ss_pred ecCCcCHHHHHHHHHHhcCCCEEEEccc
Confidence 8876 8889999999999998876543
No 83
>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1
Probab=41.12 E-value=54 Score=29.06 Aligned_cols=58 Identities=14% Similarity=0.082 Sum_probs=42.8
Q ss_pred CCCCCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEcC
Q 014951 4 RGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQE 64 (415)
Q Consensus 4 ~Gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~ii~~~ 64 (415)
.++++|++|+|...-.+-.+++++|-...|+.++.++. +++.+. +++..+++.+|...
T Consensus 182 ~~~~~g~~VlV~GaG~vG~~avqlak~~~Ga~Vi~~~~--~~~~~~-~~~~lGa~~vi~~~ 239 (359)
T 1h2b_A 182 RTLYPGAYVAIVGVGGLGHIAVQLLKVMTPATVIALDV--KEEKLK-LAERLGADHVVDAR 239 (359)
T ss_dssp TTCCTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEES--SHHHHH-HHHHTTCSEEEETT
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeC--CHHHHH-HHHHhCCCEEEecc
Confidence 68999999999999778888888887654887766654 344444 45677888777543
No 84
>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A
Probab=40.35 E-value=80 Score=27.87 Aligned_cols=59 Identities=10% Similarity=0.027 Sum_probs=42.4
Q ss_pred CCCCCCCeEEEEcC-CcHhHHHHHHHHHHcCCEE-EecCCCCCHHHHHHHHHhcCceEEEEc
Q 014951 4 RGVNPGDRCGIYGS-NCPEWIIAMEACNSQAITY-VPLYDTLGANAVEFIINHAEVSIAFVQ 63 (415)
Q Consensus 4 ~Gv~~gd~V~l~~~-n~~~~~~~~lA~~~~G~~~-~~l~~~~~~~~l~~~l~~~~~~~ii~~ 63 (415)
.++++|++|+|... -.+-.+++++|-. .|+.+ +.+.+.-..++...+++..+++.+|..
T Consensus 163 ~~~~~g~~VlV~Ga~G~vG~~aiqlak~-~Ga~vi~~~~~~~~~~~~~~~~~~lGa~~vi~~ 223 (357)
T 1zsy_A 163 EQLQPGDSVIQNASNSGVGQAVIQIAAA-LGLRTINVVRDRPDIQKLSDRLKSLGAEHVITE 223 (357)
T ss_dssp SCCCTTCEEEESSTTSHHHHHHHHHHHH-HTCEEEEEECCCSCHHHHHHHHHHTTCSEEEEH
T ss_pred hccCCCCEEEEeCCcCHHHHHHHHHHHH-cCCEEEEEecCccchHHHHHHHHhcCCcEEEec
Confidence 47999999999997 5688888888765 58754 444544444555566778888887753
No 85
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=40.14 E-value=45 Score=28.97 Aligned_cols=56 Identities=11% Similarity=0.013 Sum_probs=40.9
Q ss_pred cCCCCCCCeEEEEc-CCcHhHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEc
Q 014951 3 SRGVNPGDRCGIYG-SNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQ 63 (415)
Q Consensus 3 ~~Gv~~gd~V~l~~-~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~ii~~ 63 (415)
..++++|++|+|.. .-.+-.+++++|- ..|+.++.+. +.++ ..++++.+++.++..
T Consensus 147 ~~~~~~g~~vlV~Ga~G~vG~~a~q~a~-~~Ga~vi~~~---~~~~-~~~~~~lGa~~~i~~ 203 (321)
T 3tqh_A 147 QAEVKQGDVVLIHAGAGGVGHLAIQLAK-QKGTTVITTA---SKRN-HAFLKALGAEQCINY 203 (321)
T ss_dssp HTTCCTTCEEEESSTTSHHHHHHHHHHH-HTTCEEEEEE---CHHH-HHHHHHHTCSEEEET
T ss_pred hcCCCCCCEEEEEcCCcHHHHHHHHHHH-HcCCEEEEEe---ccch-HHHHHHcCCCEEEeC
Confidence 46899999999996 6678888888876 5688777654 3455 456677888876643
No 86
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=39.86 E-value=48 Score=29.19 Aligned_cols=55 Identities=11% Similarity=0.006 Sum_probs=39.9
Q ss_pred cCCCCCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEE
Q 014951 3 SRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAF 61 (415)
Q Consensus 3 ~~Gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~ii 61 (415)
+.++++||+|+|...-.+-.+++++|- ..|+.++.+..+- +.+. +++..+++.++
T Consensus 171 ~~~~~~g~~VlV~GaG~vG~~a~qla~-~~Ga~Vi~~~~~~--~~~~-~~~~lGa~~v~ 225 (348)
T 3two_A 171 FSKVTKGTKVGVAGFGGLGSMAVKYAV-AMGAEVSVFARNE--HKKQ-DALSMGVKHFY 225 (348)
T ss_dssp HTTCCTTCEEEEESCSHHHHHHHHHHH-HTTCEEEEECSSS--TTHH-HHHHTTCSEEE
T ss_pred hcCCCCCCEEEEECCcHHHHHHHHHHH-HCCCeEEEEeCCH--HHHH-HHHhcCCCeec
Confidence 458999999999988667888888876 4688877766433 2332 45667888777
No 87
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=39.70 E-value=38 Score=30.01 Aligned_cols=58 Identities=16% Similarity=0.087 Sum_probs=39.6
Q ss_pred cCCCC-CCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEc
Q 014951 3 SRGVN-PGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQ 63 (415)
Q Consensus 3 ~~Gv~-~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~ii~~ 63 (415)
+.+++ +|++|+|...-.+-.+++++|-. .|+.++.+..+ ++.+....+..+++.++..
T Consensus 174 ~~~~~~~g~~VlV~GaG~vG~~a~qlak~-~Ga~Vi~~~~~--~~~~~~~~~~lGa~~vi~~ 232 (357)
T 2cf5_A 174 HFGLKQPGLRGGILGLGGVGHMGVKIAKA-MGHHVTVISSS--NKKREEALQDLGADDYVIG 232 (357)
T ss_dssp HTSTTSTTCEEEEECCSHHHHHHHHHHHH-HTCEEEEEESS--TTHHHHHHTTSCCSCEEET
T ss_pred hcCCCCCCCEEEEECCCHHHHHHHHHHHH-CCCeEEEEeCC--hHHHHHHHHHcCCceeecc
Confidence 45788 99999999876788888888765 58876666543 3444444446677666543
No 88
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=39.70 E-value=60 Score=28.50 Aligned_cols=58 Identities=9% Similarity=0.019 Sum_probs=43.6
Q ss_pred CCCCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEcCC
Q 014951 5 GVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQEN 65 (415)
Q Consensus 5 Gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~ii~~~~ 65 (415)
++++|++|+|...-.+-.+++++|-..-|+.++.++. +.+.+ .+++..+++.++...+
T Consensus 168 ~~~~g~~vlv~GaG~vG~~a~qla~~~g~~~Vi~~~~--~~~~~-~~~~~lGa~~~i~~~~ 225 (345)
T 3jv7_A 168 LLGPGSTAVVIGVGGLGHVGIQILRAVSAARVIAVDL--DDDRL-ALAREVGADAAVKSGA 225 (345)
T ss_dssp GCCTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEES--CHHHH-HHHHHTTCSEEEECST
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcC--CHHHH-HHHHHcCCCEEEcCCC
Confidence 7899999999998778888888888776777777754 34444 4567788887776543
No 89
>3ju7_A Putative PLP-dependent aminotransferase; NP_978343.1, struct genomics, joint center for structural genomics, JCSG; HET: LLP PGE; 2.19A {Bacillus cereus atcc 10987}
Probab=38.88 E-value=55 Score=29.19 Aligned_cols=56 Identities=11% Similarity=-0.101 Sum_probs=38.2
Q ss_pred CCCCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCC-----CCCHHHHHHHHHhcC--ceEEEEc
Q 014951 5 GVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYD-----TLGANAVEFIINHAE--VSIAFVQ 63 (415)
Q Consensus 5 Gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~-----~~~~~~l~~~l~~~~--~~~ii~~ 63 (415)
++++||.|.+..+....+ .-++...|+.++.++. ..+.+.+...+...+ .++|+..
T Consensus 74 ~~~~Gd~Vi~~~~~~~~~---~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~tk~v~~~ 136 (377)
T 3ju7_A 74 KRKKGKYALMPSFTFPAT---PLAAIWCGLEPYFIDISIDDWYMDKTVLWDKIEELKEEVAIVVPY 136 (377)
T ss_dssp SCTTCCEEEEESSSCTHH---HHHHHHTTCEEEEECBCTTTCSBCHHHHHHHHHHHGGGEEEECCB
T ss_pred CCCCcCEEEECCCCcHHH---HHHHHHcCCEEEEEecCCccCCcCHHHHHHHHhcCCCCceEEEEE
Confidence 688999998877765554 3456678988776543 347788888774444 7777643
No 90
>2e7j_A SEP-tRNA:Cys-tRNA synthase; seven-stranded BETE-strand, lyase, structural genomics; HET: PLP; 2.40A {Archaeoglobus fulgidus} SCOP: c.67.1.9 PDB: 2e7i_A*
Probab=38.78 E-value=1.2e+02 Score=26.46 Aligned_cols=56 Identities=11% Similarity=0.093 Sum_probs=38.6
Q ss_pred CCCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecC--C----CCCHHHHHHHHHh----cCceEEEEcC
Q 014951 6 VNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLY--D----TLGANAVEFIINH----AEVSIAFVQE 64 (415)
Q Consensus 6 v~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~--~----~~~~~~l~~~l~~----~~~~~ii~~~ 64 (415)
+++||.|.+..+....+... +...|+.++.++ . ..+.+.++..++. -++++++...
T Consensus 90 ~~~gd~vl~~~~~~~~~~~~---~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~v~~~~ 155 (371)
T 2e7j_A 90 AKKDAWVVMDENCHYSSYVA---AERAGLNIALVPKTDYPDYAITPENFAQTIEETKKRGEVVLALITY 155 (371)
T ss_dssp CCTTCEEEEETTCCHHHHHH---HHHTTCEEEEECCCCTTTCCCCHHHHHHHHHHHTTTSCEEEEEEES
T ss_pred hCCCCEEEEccCcchHHHHH---HHHcCCeEEEeecccCCCCCcCHHHHHHHHHhhcccCCeEEEEEEC
Confidence 46899998887766555433 667888777666 2 2467888888875 3667766654
No 91
>3ri6_A O-acetylhomoserine sulfhydrylase; PYR 5'-phosphate, gamma-elimination, direct sulfhydrylation, CY metabolism, protein thiocarboxylate, TR; 2.20A {Wolinella succinogenes}
Probab=38.09 E-value=81 Score=28.80 Aligned_cols=26 Identities=4% Similarity=-0.242 Sum_probs=12.4
Q ss_pred CHHHHHHHHHhcCC-ceEEeeccCCCC
Q 014951 303 PIHVEEFLRVTSGA-PLTQGYGLTESC 328 (415)
Q Consensus 303 ~~~~~~~~~~~~~~-~~~~~yG~tE~~ 328 (415)
..+....+.+.+.. .+...+|..|+.
T Consensus 356 ~~~~~~~~~~~l~~~~~~~s~G~~~sl 382 (430)
T 3ri6_A 356 SKEASYRFMDALKLIRRATNIHDNKSL 382 (430)
T ss_dssp SHHHHHHHHHHCSSSEECSCCSCSSCE
T ss_pred CHHHHHHHHHhCCcceecCCCCCCCce
Confidence 34444444444433 344456777653
No 92
>3a2b_A Serine palmitoyltransferase; vitamin B6-dependent enzyme fold type I, acyltransferase, PY phosphate; HET: PLP; 2.30A {Sphingobacterium multivorum}
Probab=37.48 E-value=1.1e+02 Score=27.11 Aligned_cols=55 Identities=4% Similarity=-0.016 Sum_probs=41.0
Q ss_pred CCCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhc---CceEEEEcC
Q 014951 6 VNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHA---EVSIAFVQE 64 (415)
Q Consensus 6 v~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~---~~~~ii~~~ 64 (415)
+++||.|.+..+....+. -++...|+.++.++. ...+.+...++.. +++++++..
T Consensus 124 ~~~gd~V~~~~p~~~~~~---~~~~~~g~~~~~v~~-~d~~~l~~~l~~~~~~~~~~v~~~~ 181 (398)
T 3a2b_A 124 MGRNDYILLDERDHASII---DGSRLSFSKVIKYGH-NNMEDLRAKLSRLPEDSAKLICTDG 181 (398)
T ss_dssp SCTTCEEEEETTCCHHHH---HHHHHSSSEEEEECT-TCHHHHHHHHHTSCSSSCEEEEEES
T ss_pred hCCCCEEEECCccCHHHH---HHHHHcCCceEEeCC-CCHHHHHHHHHhhccCCceEEEEeC
Confidence 468999988877666553 346678998888765 5788899888875 677777654
No 93
>2vsq_A Surfactin synthetase subunit 3; ligase, peptidyl carrier protein, ligase phosphoprotein, TER module, phosphopantetheine; 2.60A {Bacillus subtilis}
Probab=36.91 E-value=62 Score=34.61 Aligned_cols=89 Identities=10% Similarity=-0.004 Sum_probs=64.6
Q ss_pred cCCCCCCCeEEEEcCCcHhHH-HHHHHHHHcCCEEEecCC--CCCHHHHHHHHHhcCceEEEEcCCChhhhhhcCccCCC
Q 014951 3 SRGVNPGDRCGIYGSNCPEWI-IAMEACNSQAITYVPLYD--TLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCL 79 (415)
Q Consensus 3 ~~Gv~~gd~V~l~~~n~~~~~-~~~lA~~~~G~~~~~l~~--~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~ 79 (415)
..++.++|++..+.+-+.+.. .-+++.+..|+.++..++ ..+++.+...+++.++.+++........+.+......+
T Consensus 641 ~~~~~~~d~~l~~~~~~fd~~~~~~~~~l~~G~~l~~~~~~~~~~~~~l~~~i~~~~vt~~~~~p~~~~~l~~~~~~~~~ 720 (1304)
T 2vsq_A 641 YMAFSDQDTFLSVSNYAFDAFTFDFYASMLNAARLIIADEHTLLDTERLTDLILQENVNVMFATTALFNLLTDAGEDWMK 720 (1304)
T ss_dssp SSCCCTTCEEEECSCTTSTHHHHHHHHHHTTTCEEEECCGGGTTCHHHHHHHHHHHTCCEEEEEHHHHHHHHHHCSHHHH
T ss_pred hcCCCCCCEEEEECCccHHHHHHHHHHHHHcCCEEEECChhhcCCHHHHHHHHHHcCCcEEEccHHHHHHHHhhchhcCC
Confidence 357889999998888775543 346788889998887765 46788999999999999999888766655443322234
Q ss_pred CccEEEEecCCC
Q 014951 80 YLKTIVSFANVS 91 (415)
Q Consensus 80 ~~~~v~~~~~~~ 91 (415)
.++.++.-++..
T Consensus 721 ~lr~~~~gGe~l 732 (1304)
T 2vsq_A 721 GLRCILFGGERA 732 (1304)
T ss_dssp TCSEEEEESSCC
T ss_pred CccEEEEecCCC
Confidence 567777665543
No 94
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=36.68 E-value=83 Score=27.84 Aligned_cols=57 Identities=9% Similarity=0.006 Sum_probs=41.1
Q ss_pred ccCCCCCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEE
Q 014951 2 RSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFV 62 (415)
Q Consensus 2 ~~~Gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~ii~ 62 (415)
+..++++|++|+|...-.+-.+++++|- ..|+.++.+.. +.+.+.. ++..+++.++.
T Consensus 183 ~~~~~~~g~~VlV~G~G~vG~~a~qla~-~~Ga~Vi~~~~--~~~~~~~-~~~lGa~~vi~ 239 (363)
T 3uog_A 183 EKGHLRAGDRVVVQGTGGVALFGLQIAK-ATGAEVIVTSS--SREKLDR-AFALGADHGIN 239 (363)
T ss_dssp TTTCCCTTCEEEEESSBHHHHHHHHHHH-HTTCEEEEEES--CHHHHHH-HHHHTCSEEEE
T ss_pred HhcCCCCCCEEEEECCCHHHHHHHHHHH-HcCCEEEEEec--CchhHHH-HHHcCCCEEEc
Confidence 3568999999999996567777777776 57888776654 4444443 56777777775
No 95
>2ch1_A 3-hydroxykynurenine transaminase; PLP-enzyme, kynurenine pathway, transferase; HET: LLP; 2.4A {Anopheles gambiae} SCOP: c.67.1.3 PDB: 2ch2_A*
Probab=36.29 E-value=96 Score=27.43 Aligned_cols=57 Identities=14% Similarity=0.078 Sum_probs=38.1
Q ss_pred CCCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCC----CCCHHHHHHHHHhcCceEEEEc
Q 014951 6 VNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYD----TLGANAVEFIINHAEVSIAFVQ 63 (415)
Q Consensus 6 v~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~----~~~~~~l~~~l~~~~~~~ii~~ 63 (415)
+++||.|.+..+....+. ..-++...|+.++.++. ..+.+++...++..++++|+..
T Consensus 90 ~~~gd~vl~~~~~~~~~~-~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~~v~~~ 150 (396)
T 2ch1_A 90 LEEGDRVLIAVNGIWAER-AVEMSERYGADVRTIEGPPDRPFSLETLARAIELHQPKCLFLT 150 (396)
T ss_dssp CCTTCEEEEEESSHHHHH-HHHHHHHTTCEEEEEECCTTSCCCHHHHHHHHHHHCCSEEEEE
T ss_pred cCCCCeEEEEcCCcccHH-HHHHHHHcCCceEEecCCCCCCCCHHHHHHHHHhCCCCEEEEE
Confidence 468999988877666542 22245667877665543 3677888888876567777664
No 96
>3kki_A CAI-1 autoinducer synthase; quorum sensing, CQSA, P virulence, acyltransferase, aminotransferase, pyridoxal PHO transferase; HET: PLP; 1.80A {Vibrio cholerae} PDB: 3hqt_A* 2wk9_A* 2wk8_A* 2wka_A* 2wk7_A
Probab=36.01 E-value=65 Score=28.89 Aligned_cols=55 Identities=13% Similarity=0.099 Sum_probs=40.6
Q ss_pred CCCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEcC
Q 014951 6 VNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQE 64 (415)
Q Consensus 6 v~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~ii~~~ 64 (415)
+++||.|.+-.+....+ .-++...|+.+++++. ...+.++..++..++++++++.
T Consensus 140 ~~~gd~Vl~~~~~~~~~---~~~~~~~g~~~~~~~~-~d~~~le~~l~~~~~~~vi~~~ 194 (409)
T 3kki_A 140 CQPNTNVYIDFFAHMSL---WEGARYANAQAHPFMH-NNCDHLRMLIQRHGPGIIVVDS 194 (409)
T ss_dssp CCTTCEEEEETTSCHHH---HHHHHHTTCEEEEECT-TCHHHHHHHHHHHCSCEEEEES
T ss_pred cCCCCEEEECCCcCHHH---HHHHHHcCCeEEEecC-CCHHHHHHHHHhcCCeEEEECC
Confidence 46899998766654443 4456677988888754 5788899999877778888775
No 97
>4aec_A Cysteine synthase, mitochondrial; lyase, cysteine synthesis, assimilatory sulfate reduction, S plant inorganic sulfur uptake; HET: PLP; 2.40A {Arabidopsis thaliana}
Probab=35.46 E-value=80 Score=28.91 Aligned_cols=61 Identities=8% Similarity=0.074 Sum_probs=46.4
Q ss_pred CC-CCCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEcC
Q 014951 4 RG-VNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQE 64 (415)
Q Consensus 4 ~G-v~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~ii~~~ 64 (415)
.| +++|....+....+-.-..+.++|.+.|..++.+-|...+..-...++..++++++++.
T Consensus 168 ~G~l~~g~~~VV~aSsGNhG~AlA~aAa~~Gl~~~IvmP~~~s~~k~~~~r~~GAeVv~v~~ 229 (430)
T 4aec_A 168 KGFISPGKSVLVEPTSGNTGIGLAFIAASRGYRLILTMPASMSMERRVLLKAFGAELVLTDP 229 (430)
T ss_dssp TTSCCTTTCEEEEECSSHHHHHHHHHHHHHTCEEEEEEETTSCHHHHHHHHHTTCEEEEECG
T ss_pred cCCCCCCCcEEEEECCCHHHHHHHHHHHHhCCEEEEEEcCCCCHHHHHHHHHCCCEEEEECC
Confidence 45 46776555555667777778888999999888776666666777788999999999974
No 98
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=35.17 E-value=43 Score=29.55 Aligned_cols=56 Identities=9% Similarity=-0.031 Sum_probs=40.1
Q ss_pred cCCCCCCCeEEEEcCCcHhHHHHHHHHHHcCC-EEEecCCCCCHHHHHHHHHhcCceEEEE
Q 014951 3 SRGVNPGDRCGIYGSNCPEWIIAMEACNSQAI-TYVPLYDTLGANAVEFIINHAEVSIAFV 62 (415)
Q Consensus 3 ~~Gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~-~~~~l~~~~~~~~l~~~l~~~~~~~ii~ 62 (415)
..++++||+|+|...-.+-.+++++|- ..|+ .++.++. +++.+ .+++..+++.++.
T Consensus 161 ~~~~~~g~~VlV~GaG~vG~~a~qla~-~~Ga~~Vi~~~~--~~~~~-~~~~~lGa~~vi~ 217 (352)
T 3fpc_A 161 LANIKLGDTVCVIGIGPVGLMSVAGAN-HLGAGRIFAVGS--RKHCC-DIALEYGATDIIN 217 (352)
T ss_dssp HTTCCTTCCEEEECCSHHHHHHHHHHH-TTTCSSEEEECC--CHHHH-HHHHHHTCCEEEC
T ss_pred hcCCCCCCEEEEECCCHHHHHHHHHHH-HcCCcEEEEECC--CHHHH-HHHHHhCCceEEc
Confidence 468999999999987667888888775 4687 5666654 34433 4566777877664
No 99
>3zrp_A Serine-pyruvate aminotransferase (AGXT); HET: PLP; 1.75A {Sulfolobus solfataricus} PDB: 3zrq_A* 3zrr_A*
Probab=33.94 E-value=1.2e+02 Score=26.46 Aligned_cols=58 Identities=10% Similarity=0.071 Sum_probs=38.6
Q ss_pred CCCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCCC----CCHHHHHHHHHhcCceEEEEcC
Q 014951 6 VNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDT----LGANAVEFIINHAEVSIAFVQE 64 (415)
Q Consensus 6 v~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~~----~~~~~l~~~l~~~~~~~ii~~~ 64 (415)
+++||.|.+..+..... ...-.+...|+.++.++.. .+.+++...++..++++++...
T Consensus 74 ~~~gd~vi~~~~~~~~~-~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~v~~~~ 135 (384)
T 3zrp_A 74 LKPNDKILVVSNGVFGD-RWEQIFKRYPVNVKVLRPSPGDYVKPGEVEEEVRKSEYKLVALTH 135 (384)
T ss_dssp CCTTCEEEEECSSHHHH-HHHHHHTTSSCEEEEECCSTTCCCCHHHHHHHHHHSCEEEEEEES
T ss_pred cCCCCEEEEecCCcchH-HHHHHHHHcCCcEEEecCCCCCCCCHHHHHHHHHhCCCcEEEEeC
Confidence 67999988876643221 1222334678777666433 5788999999887788877764
No 100
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=33.08 E-value=77 Score=28.13 Aligned_cols=57 Identities=16% Similarity=0.132 Sum_probs=39.8
Q ss_pred cCCCC-CCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEE
Q 014951 3 SRGVN-PGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFV 62 (415)
Q Consensus 3 ~~Gv~-~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~ii~ 62 (415)
+.+++ +|++|+|...-.+-..++.+|- ..|+.++.+.. +.+.+....+..+++.++.
T Consensus 181 ~~~~~~~g~~VlV~GaG~vG~~~~q~a~-~~Ga~Vi~~~~--~~~~~~~~~~~lGa~~v~~ 238 (366)
T 1yqd_A 181 YFGLDEPGKHIGIVGLGGLGHVAVKFAK-AFGSKVTVIST--SPSKKEEALKNFGADSFLV 238 (366)
T ss_dssp HTTCCCTTCEEEEECCSHHHHHHHHHHH-HTTCEEEEEES--CGGGHHHHHHTSCCSEEEE
T ss_pred hcCcCCCCCEEEEECCCHHHHHHHHHHH-HCCCEEEEEeC--CHHHHHHHHHhcCCceEEe
Confidence 45788 9999999987667888888776 46887665554 3455555555677776654
No 101
>3isl_A Purine catabolism protein PUCG; pyridoxalphosphate, PLP dependent enzymes, purine metabolism transaminases, aminotransferases; HET: PLP; 2.06A {Bacillus subtilis}
Probab=32.78 E-value=1.2e+02 Score=27.06 Aligned_cols=58 Identities=12% Similarity=0.024 Sum_probs=36.1
Q ss_pred CCCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCCC----CCHHHHHHHHHhcCceEEEEcC
Q 014951 6 VNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDT----LGANAVEFIINHAEVSIAFVQE 64 (415)
Q Consensus 6 v~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~~----~~~~~l~~~l~~~~~~~ii~~~ 64 (415)
+++||.|.+..+...... ..-++...|+.++.++.. ++.+++...++..++++|+...
T Consensus 83 ~~~gd~Vl~~~~~~~~~~-~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~v~~~~ 144 (416)
T 3isl_A 83 IEPEDDVLIPIYGRFGYL-LTEIAERYGANVHMLECEWGTVFDPEDIIREIKKVKPKIVAMVH 144 (416)
T ss_dssp CCTTCEEEEEESSHHHHH-HHHHHHHTTCEEEEEECCTTCCCCHHHHHHHHHHHCCSEEEEES
T ss_pred cCCCCEEEEecCCcccHH-HHHHHHhcCCeeEEEecCCCCCCCHHHHHHHHhhCCCcEEEEEc
Confidence 578888888776544311 223455667766655432 4678888888765677766654
No 102
>3kax_A Aminotransferase, classes I and II; PLP, C-S lyase, transf structural genomics, center for structural genomics of INFE diseases, csgid; HET: LLP MSE PLP; 1.70A {Bacillus anthracis str} PDB: 3t32_A*
Probab=32.66 E-value=1.3e+02 Score=26.44 Aligned_cols=54 Identities=7% Similarity=0.054 Sum_probs=36.4
Q ss_pred CCCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCCC-------CCHHHHHHHHHhcCceEEEEc
Q 014951 6 VNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDT-------LGANAVEFIINHAEVSIAFVQ 63 (415)
Q Consensus 6 v~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~~-------~~~~~l~~~l~~~~~~~ii~~ 63 (415)
+++||.|.+..+....+. .++...|+.++.++.. ...+++...+ ..++++++..
T Consensus 103 ~~~gd~vl~~~~~~~~~~---~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~l-~~~~~~v~i~ 163 (383)
T 3kax_A 103 TKENESVLVQPPIYPPFF---EMVTTNNRQLCVSPLQKQNDTYAIDFEHLEKQF-QQGVKLMLLC 163 (383)
T ss_dssp CCTTCEEEECSSCCHHHH---HHHHHTTCEEEECCCEEETTEEECCHHHHHHHH-TTTCCEEEEE
T ss_pred CCCCCEEEEcCCCcHHHH---HHHHHcCCEEEeccceecCCcEEEcHHHHHHHh-CcCCeEEEEe
Confidence 468888887776655543 4466778887776542 5778888877 4566766654
No 103
>3rg2_A Enterobactin synthase component E (ENTE), 2,3-DIH dihydroxybenzoate synthetase, isochroismatase...; adenylate-forming enzymes, ANL superfamily; HET: SVS PNS; 3.10A {Escherichia coli}
Probab=32.56 E-value=1.9e+02 Score=27.74 Aligned_cols=91 Identities=11% Similarity=-0.018 Sum_probs=68.1
Q ss_pred CCCeEEEEecCCCCCCCceEEeecHHHHHHhhhhhhhhhhccccCCCCCEEEEeCChhhHHHHHHHHHhhhcCcEEEEeC
Q 014951 126 KTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWR 205 (415)
Q Consensus 126 ~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~vv~~~ 205 (415)
++.+|++. + .-.+|...+......+...+.. .+..++|++..+++-+. -....+++++..|+..+...
T Consensus 39 pd~~Av~~---~------~~~lTY~eL~~~a~~lA~~L~~--~Gv~~gd~V~l~~~~s~-~~vva~lA~l~aG~~~vpl~ 106 (617)
T 3rg2_A 39 SDSIAVID---G------ERQLSYRELNQAADNLACSLRR--QGIKPGETALVQLGNVA-ELYITFFALLKLGVAPVLAL 106 (617)
T ss_dssp CCSEEEEE---T------TEEEEHHHHHHHHHHHHHHHHH--TTCCTTCEEEEECCSSH-HHHHHHHHHHHHTCEEEEEC
T ss_pred CCCeEEec---C------CceEeHHHHHHHHHHHHHHHHH--cCCCCCCEEEEECCCcH-HHHHHHHHHHhcCeEEccCC
Confidence 56777652 1 2368999999888887765532 26789999999888653 23345778899999988776
Q ss_pred C--CHHHHHHHHHhhCCeEEEeCcH
Q 014951 206 G--DVRYLMEDIQELKPTMFSGVPR 228 (415)
Q Consensus 206 ~--~~~~~~~~i~~~~~t~~~~~P~ 228 (415)
. ...++...++..++..+.....
T Consensus 107 ~~~~~~~l~~~l~~~~~~~vl~~~~ 131 (617)
T 3rg2_A 107 FSHQRSELNAYASQIEPALLIADRQ 131 (617)
T ss_dssp TTCCHHHHHHHHHHHCCSEEEEETT
T ss_pred ccccHHHHHHHHhhcCceEEEeccc
Confidence 5 7888999999999999887654
No 104
>4eb5_A Probable cysteine desulfurase 2; scaffold, transferase-metal binding protein complex; HET: PLP EPE; 2.53A {Archaeoglobus fulgidus} PDB: 4eb7_A*
Probab=32.40 E-value=56 Score=28.79 Aligned_cols=56 Identities=9% Similarity=0.017 Sum_probs=28.6
Q ss_pred CCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCCC----CCHHHHHHHHHhcCceEEEEc
Q 014951 7 NPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDT----LGANAVEFIINHAEVSIAFVQ 63 (415)
Q Consensus 7 ~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~~----~~~~~l~~~l~~~~~~~ii~~ 63 (415)
++||.|.+..+..+.+.-....+...|+.++.++.. .+.+++...++. ++++++..
T Consensus 86 ~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-~~~~v~~~ 145 (382)
T 4eb5_A 86 RKGKHILVSAVEHMSVINPAKFLQKQGFEVEYIPVGKYGEVDVSFIDQKLRD-DTILVSVQ 145 (382)
T ss_dssp GGCCEEEEETTCCHHHHHHHHHHTTTTCEEEEECBCTTSCBCHHHHHHHCCT-TEEEEECC
T ss_pred CCCCEEEECCCcchHHHHHHHHHHhCCcEEEEeccCCCCccCHHHHHHHhcC-CCeEEEEe
Confidence 467777666665544433333233456665544322 345666655543 45555544
No 105
>2bkw_A Alanine-glyoxylate aminotransferase 1; analine-glyoxylate aminotransferase, pyridoxal-5-phosphate, SAD, glycolate pathway; HET: LLP; 2.57A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=32.39 E-value=1.6e+02 Score=25.80 Aligned_cols=57 Identities=5% Similarity=-0.035 Sum_probs=35.7
Q ss_pred CCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCC-C----CCHHHHHHHHHhcCceEEEEcC
Q 014951 7 NPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYD-T----LGANAVEFIINHAEVSIAFVQE 64 (415)
Q Consensus 7 ~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~-~----~~~~~l~~~l~~~~~~~ii~~~ 64 (415)
++||.|.+..+......+ .-++...|+.++.++. . .+.+.++..++..++++|+...
T Consensus 84 ~~gd~vlv~~~~~~~~~~-~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~~~~~~v~~~~ 145 (385)
T 2bkw_A 84 APNKNVLVVSTGTFSDRF-ADCLRSYGAQVDVVRPLKIGESVPLELITEKLSQNSYGAVTVTH 145 (385)
T ss_dssp CSCCEEEEECSSHHHHHH-HHHHHHTTCEEEEECCSSTTSCCCHHHHHHHHHHSCCSEEEEES
T ss_pred CCCCeEEEEcCCcchHHH-HHHHHHcCCceEEEecCCCCCCCCHHHHHHHHhcCCCCEEEEEc
Confidence 789988776443333222 2244567877766654 2 5678888888765677776653
No 106
>1o69_A Aminotransferase; structural genomics, unknown function; HET: X04; 1.84A {Campylobacter jejuni} SCOP: c.67.1.4 PDB: 1o62_A 1o61_A*
Probab=32.32 E-value=1e+02 Score=27.39 Aligned_cols=57 Identities=9% Similarity=0.007 Sum_probs=39.8
Q ss_pred CCCCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCC----CCCHHHHHHHHHhc--CceEEEEcC
Q 014951 5 GVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYD----TLGANAVEFIINHA--EVSIAFVQE 64 (415)
Q Consensus 5 Gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~----~~~~~~l~~~l~~~--~~~~ii~~~ 64 (415)
++++||.|.+..+....+.. ++...|+.++.++. ..+.+.+...++.. ++++|+...
T Consensus 68 ~~~~gd~Vl~~~~~~~~~~~---~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~~~v~~~~ 130 (394)
T 1o69_A 68 GVKQDDIVLASSFTFIASVA---PICYLKAKPVFIDCDETYNIDVDLLKLAIKECEKKPKALILTH 130 (394)
T ss_dssp TCCTTCEEEEESSSCGGGTH---HHHHTTCEEEEECBCTTSSBCHHHHHHHHHHCSSCCCEEEEEC
T ss_pred CCCCCCEEEECCCccHHHHH---HHHHcCCEEEEEEeCCCCCcCHHHHHHHHhcccCCceEEEEEC
Confidence 47899999988887766543 34457887776654 25678888888764 577776654
No 107
>4hvk_A Probable cysteine desulfurase 2; transferase and ISCS, transferase; HET: PMP PG4; 1.43A {Archaeoglobus fulgidus} PDB: 4eb7_A* 4eb5_A*
Probab=32.10 E-value=72 Score=27.95 Aligned_cols=56 Identities=9% Similarity=0.017 Sum_probs=31.3
Q ss_pred CCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCCC----CCHHHHHHHHHhcCceEEEEc
Q 014951 7 NPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDT----LGANAVEFIINHAEVSIAFVQ 63 (415)
Q Consensus 7 ~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~~----~~~~~l~~~l~~~~~~~ii~~ 63 (415)
++||.|.+..+..+.+.-....+.+.|+.++.++.. .+.+++...++. ++++++..
T Consensus 86 ~~gd~vi~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-~~~~v~~~ 145 (382)
T 4hvk_A 86 RKGKHILVSAVEHMSVINPAKFLQKQGFEVEYIPVGKYGEVDVSFIDQKLRD-DTILVSVQ 145 (382)
T ss_dssp GGCCEEEEETTCCHHHHHHHHHHHHTTCEEEEECBCTTSCBCHHHHHHHCCT-TEEEEECC
T ss_pred CCCCEEEECCCCcHHHHHHHHHHHhcCCEEEEeccCCCCCcCHHHHHHHhcc-CceEEEEE
Confidence 577777777666665554444444566666555432 355666665542 44555544
No 108
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=31.92 E-value=57 Score=29.05 Aligned_cols=56 Identities=13% Similarity=0.090 Sum_probs=39.6
Q ss_pred cCCCCCCCeEEEEcCCcHhHHHHHHHHHHcCC-EEEecCCCCCHHHHHHHHHhcCceEEEE
Q 014951 3 SRGVNPGDRCGIYGSNCPEWIIAMEACNSQAI-TYVPLYDTLGANAVEFIINHAEVSIAFV 62 (415)
Q Consensus 3 ~~Gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~-~~~~l~~~~~~~~l~~~l~~~~~~~ii~ 62 (415)
..++++|++|+|...-.+-.+++++|- ..|+ .++.++. +++.+ .+++..++..++-
T Consensus 177 ~~~~~~g~~VlV~GaG~vG~~aiqlak-~~Ga~~Vi~~~~--~~~~~-~~a~~lGa~~vi~ 233 (370)
T 4ej6_A 177 LSGIKAGSTVAILGGGVIGLLTVQLAR-LAGATTVILSTR--QATKR-RLAEEVGATATVD 233 (370)
T ss_dssp HHTCCTTCEEEEECCSHHHHHHHHHHH-HTTCSEEEEECS--CHHHH-HHHHHHTCSEEEC
T ss_pred hcCCCCCCEEEEECCCHHHHHHHHHHH-HcCCCEEEEECC--CHHHH-HHHHHcCCCEEEC
Confidence 357899999999998667888777776 5788 6666654 34443 4566677776663
No 109
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=31.76 E-value=1.2e+02 Score=27.01 Aligned_cols=57 Identities=16% Similarity=0.135 Sum_probs=40.1
Q ss_pred cCCCCCCCeEEEEcCCcHhHHHHHHHHHHcCC-EEEecCCCCCHHHHHHHHHhcCceEEEEc
Q 014951 3 SRGVNPGDRCGIYGSNCPEWIIAMEACNSQAI-TYVPLYDTLGANAVEFIINHAEVSIAFVQ 63 (415)
Q Consensus 3 ~~Gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~-~~~~l~~~~~~~~l~~~l~~~~~~~ii~~ 63 (415)
..++++|++|+|...-.+-.+++++|-. .|+ .++.++.+- +.+. +++..+++.+|..
T Consensus 188 ~~~~~~g~~VlV~GaG~vG~~a~q~a~~-~Ga~~Vi~~~~~~--~~~~-~a~~lGa~~vi~~ 245 (378)
T 3uko_A 188 TAKVEPGSNVAIFGLGTVGLAVAEGAKT-AGASRIIGIDIDS--KKYE-TAKKFGVNEFVNP 245 (378)
T ss_dssp TTCCCTTCCEEEECCSHHHHHHHHHHHH-HTCSCEEEECSCT--THHH-HHHTTTCCEEECG
T ss_pred hcCCCCCCEEEEECCCHHHHHHHHHHHH-cCCCeEEEEcCCH--HHHH-HHHHcCCcEEEcc
Confidence 4689999999999986678888888764 587 566666433 3333 5567777776643
No 110
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=31.51 E-value=1.1e+02 Score=27.57 Aligned_cols=56 Identities=11% Similarity=0.026 Sum_probs=40.3
Q ss_pred CCCCCCCeEEEEcCCcHhHHHHHHHHHHcCC-EEEecCCCCCHHHHHHHHHhcCceEEEEc
Q 014951 4 RGVNPGDRCGIYGSNCPEWIIAMEACNSQAI-TYVPLYDTLGANAVEFIINHAEVSIAFVQ 63 (415)
Q Consensus 4 ~Gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~-~~~~l~~~~~~~~l~~~l~~~~~~~ii~~ 63 (415)
.++++||+|+|...-.+-.+++++|- ..|+ .++.++. +++.+ .+++..+++.+|..
T Consensus 209 ~~~~~g~~VlV~GaG~vG~~aiqlak-~~Ga~~Vi~~~~--~~~~~-~~~~~lGa~~vi~~ 265 (404)
T 3ip1_A 209 GGIRPGDNVVILGGGPIGLAAVAILK-HAGASKVILSEP--SEVRR-NLAKELGADHVIDP 265 (404)
T ss_dssp CCCCTTCEEEEECCSHHHHHHHHHHH-HTTCSEEEEECS--CHHHH-HHHHHHTCSEEECT
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHH-HcCCCEEEEECC--CHHHH-HHHHHcCCCEEEcC
Confidence 37999999999998667888888876 5688 6766654 34444 35567777777643
No 111
>2z9v_A Aspartate aminotransferase; pyridoxamine, pyruvate; HET: PXM; 1.70A {Mesorhizobium loti} PDB: 2z9u_A* 2z9w_A* 2z9x_A*
Probab=31.39 E-value=1e+02 Score=27.14 Aligned_cols=58 Identities=12% Similarity=0.022 Sum_probs=34.5
Q ss_pred CCCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEec--CCC--CCHHHHHHHHHh-cCceEEEEcC
Q 014951 6 VNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPL--YDT--LGANAVEFIINH-AEVSIAFVQE 64 (415)
Q Consensus 6 v~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l--~~~--~~~~~l~~~l~~-~~~~~ii~~~ 64 (415)
+++||.|.+..+..+... ..-.+...|+.++.+ ++. .+.+.+...++. -++++|+...
T Consensus 80 ~~~gd~Vl~~~~~~~~~~-~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~~~v~~~~ 142 (392)
T 2z9v_A 80 ISPDDVVLNLASGVYGKG-FGYWAKRYSPHLLEIEVPYNEAIDPQAVADMLKAHPEITVVSVCH 142 (392)
T ss_dssp CCTTCCEEEEESSHHHHH-HHHHHHHHCSCEEEEECCTTSCCCHHHHHHHHHHCTTCCEEEEES
T ss_pred cCCCCEEEEecCCcccHH-HHHHHHHcCCceEEeeCCCCCCCCHHHHHHHHhcCCCCcEEEEec
Confidence 468898888776554432 111223456655544 332 578888888864 3677776654
No 112
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=31.30 E-value=95 Score=27.53 Aligned_cols=56 Identities=9% Similarity=0.147 Sum_probs=39.0
Q ss_pred cCCCCCCCeEEEEcCCcHhHHHHHHHHHHcCC-EEEecCCCCCHHHHHHHHHhcCceEEEE
Q 014951 3 SRGVNPGDRCGIYGSNCPEWIIAMEACNSQAI-TYVPLYDTLGANAVEFIINHAEVSIAFV 62 (415)
Q Consensus 3 ~~Gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~-~~~~l~~~~~~~~l~~~l~~~~~~~ii~ 62 (415)
..++++||+|+|...-.+-.+++++|-. .|+ .++.++.+ ++.+ .+++..+++.+|.
T Consensus 186 ~~~~~~g~~VlV~GaG~vG~~aiqlak~-~Ga~~Vi~~~~~--~~~~-~~a~~lGa~~vi~ 242 (373)
T 1p0f_A 186 TAKVTPGSTCAVFGLGGVGFSAIVGCKA-AGASRIIGVGTH--KDKF-PKAIELGATECLN 242 (373)
T ss_dssp TTCCCTTCEEEEECCSHHHHHHHHHHHH-HTCSEEEEECSC--GGGH-HHHHHTTCSEEEC
T ss_pred ccCCCCCCEEEEECCCHHHHHHHHHHHH-cCCCeEEEECCC--HHHH-HHHHHcCCcEEEe
Confidence 4689999999999976678888888765 477 56656542 3333 3345677777664
No 113
>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8
Probab=31.08 E-value=1.1e+02 Score=22.65 Aligned_cols=58 Identities=7% Similarity=-0.074 Sum_probs=39.9
Q ss_pred CCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEcCCChhh
Q 014951 9 GDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPS 69 (415)
Q Consensus 9 gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~ 69 (415)
=|.|.++.| .....-+...|..+|...+.+.+..-.+++....+..+.. +.++.+...
T Consensus 70 vDlvii~vp-~~~v~~v~~~~~~~g~~~i~~~~~~~~~~l~~~a~~~Gi~--~igpnc~g~ 127 (138)
T 1y81_A 70 VDVIVFVVP-PKVGLQVAKEAVEAGFKKLWFQPGAESEEIRRFLEKAGVE--YSFGRCIMV 127 (138)
T ss_dssp CCEEEECSC-HHHHHHHHHHHHHTTCCEEEECTTSCCHHHHHHHHHHTCE--EECSCCHHH
T ss_pred CCEEEEEeC-HHHHHHHHHHHHHcCCCEEEEcCccHHHHHHHHHHHCCCE--EEcCCcceE
Confidence 367777777 4555555566777888777777776778888888877766 346666543
No 114
>3dwg_A Cysteine synthase B; sulfur carrier protein complex, beta-grAsp fold, amino-acid biosynthesis; HET: PLP; 1.53A {Mycobacterium tuberculosis} SCOP: c.79.1.0 PDB: 3fgp_A* 3dki_A* 3dwi_A*
Probab=31.03 E-value=1.2e+02 Score=26.44 Aligned_cols=59 Identities=10% Similarity=0.008 Sum_probs=43.6
Q ss_pred CCCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEcCC
Q 014951 6 VNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQEN 65 (415)
Q Consensus 6 v~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~ii~~~~ 65 (415)
+++|+.|...+ .+-.-..+.++|.+.|..++.+-|...+..-...++..++++++++..
T Consensus 70 l~~~~~vv~aS-sGN~g~alA~aa~~~G~~~~iv~p~~~~~~k~~~~~~~GA~V~~~~~~ 128 (325)
T 3dwg_A 70 LRPGATILEPT-SGNTGISLAMAARLKGYRLICVMPENTSVERRQLLELYGAQIIFSAAE 128 (325)
T ss_dssp CCTTCEEEEEC-SSHHHHHHHHHHHHHTCEEEEEEESSSCHHHHHHHHHHTCEEEEECST
T ss_pred CCCCCEEEEeC-CcHHHHHHHHHHHHcCCcEEEEECCCCCHHHHHHHHHCCCEEEEECCC
Confidence 46777776654 455666677777888988887766655666677889999999999864
No 115
>1z7w_A Cysteine synthase; transferase; HET: PLP; 2.20A {Arabidopsis thaliana} SCOP: c.79.1.1 PDB: 1z7y_A* 2isq_A*
Probab=31.01 E-value=1.1e+02 Score=26.59 Aligned_cols=60 Identities=8% Similarity=0.059 Sum_probs=42.6
Q ss_pred CCCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEcCC
Q 014951 6 VNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQEN 65 (415)
Q Consensus 6 v~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~ii~~~~ 65 (415)
+++|+...+....+-.-..+.++|.+.|..+..+-|...+..-...++..++++++++..
T Consensus 63 ~~~~~~~vv~assGN~g~alA~aa~~~G~~~~iv~p~~~~~~k~~~~~~~GA~V~~~~~~ 122 (322)
T 1z7w_A 63 IKPGESVLIEPTSGNTGVGLAFTAAAKGYKLIITMPASMSTERRIILLAFGVELVLTDPA 122 (322)
T ss_dssp CCTTTCEEEEECSSHHHHHHHHHHHHHTCEEEEEEETTSCHHHHHHHHHTTCEEEEECGG
T ss_pred CCCCCCEEEEeCCCHHHHHHHHHHHHcCCCEEEEeCCCCCHHHHHHHHHcCCEEEEeCCC
Confidence 356753444455666666677788899998877665555566667889999999998753
No 116
>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A
Probab=30.90 E-value=1.1e+02 Score=26.98 Aligned_cols=58 Identities=9% Similarity=0.009 Sum_probs=40.2
Q ss_pred CCCCCC-CeEEEEcC-CcHhHHHHHHHHHHcCCEEEecCCCCCH-HHHHHHHHhcCceEEEE
Q 014951 4 RGVNPG-DRCGIYGS-NCPEWIIAMEACNSQAITYVPLYDTLGA-NAVEFIINHAEVSIAFV 62 (415)
Q Consensus 4 ~Gv~~g-d~V~l~~~-n~~~~~~~~lA~~~~G~~~~~l~~~~~~-~~l~~~l~~~~~~~ii~ 62 (415)
.++++| ++|+|... -.+-.+++++|-. .|+.++.+...... ++....++..+++.+|.
T Consensus 162 ~~~~~g~~~VlV~Ga~G~vG~~aiqlak~-~Ga~vi~~~~~~~~~~~~~~~~~~lGa~~vi~ 222 (364)
T 1gu7_A 162 VKLTPGKDWFIQNGGTSAVGKYASQIGKL-LNFNSISVIRDRPNLDEVVASLKELGATQVIT 222 (364)
T ss_dssp SCCCTTTCEEEESCTTSHHHHHHHHHHHH-HTCEEEEEECCCTTHHHHHHHHHHHTCSEEEE
T ss_pred hccCCCCcEEEECCCCcHHHHHHHHHHHH-CCCEEEEEecCccccHHHHHHHHhcCCeEEEe
Confidence 479999 99999987 6688888888775 58866655433222 33444556778877764
No 117
>3i16_A Aluminum resistance protein; YP_878183.1, carbon-sulfur lyase involved in aluminum resist structural genomics; HET: MSE TLA PLP; 2.00A {Clostridium novyi} PDB: 3gwp_A*
Probab=30.58 E-value=76 Score=29.02 Aligned_cols=59 Identities=10% Similarity=0.156 Sum_probs=37.8
Q ss_pred CCCCCeEEEEc-CCcHhHHHHH--------HHHHHcCCEEEecCCC----CCHHHHHHHHHh-cCceEEEEcC
Q 014951 6 VNPGDRCGIYG-SNCPEWIIAM--------EACNSQAITYVPLYDT----LGANAVEFIINH-AEVSIAFVQE 64 (415)
Q Consensus 6 v~~gd~V~l~~-~n~~~~~~~~--------lA~~~~G~~~~~l~~~----~~~~~l~~~l~~-~~~~~ii~~~ 64 (415)
+++||.|.+.. +....+.-.. -.+...|+.+..++.. ...+.+...++. .++++|++..
T Consensus 112 l~pGD~Vl~~~~~~y~~~~~~~g~~~~~~~~~l~~~G~~~~~v~~~~~g~~D~e~l~~~l~~~~~tklV~i~~ 184 (427)
T 3i16_A 112 LRPGNTMLSVCGEPYDTLHDVIGITENSNMGSLKEFGINYKQVDLKEDGKPNLEEIEKVLKEDESITLVHIQR 184 (427)
T ss_dssp CCTTCEEEESSSSCCGGGHHHHTCSCCCSSCCTGGGTCEEEECCCCTTSSCCHHHHHHHHHTCTTEEEEEEEC
T ss_pred hCCCCEEEEeCCCccHHHHHHHhccccchHHHHHHcCCEEEEecCccCCCcCHHHHHHHhhCCCCCEEEEEEc
Confidence 57899887765 3332222111 1234568888777653 677888888875 5788888766
No 118
>1d2f_A MALY protein; aminotransferase fold, large PLP-binding domain, small C-TER domain, open alpha-beta structure., transferase; HET: PLP; 2.50A {Escherichia coli} SCOP: c.67.1.3
Probab=30.37 E-value=1.2e+02 Score=26.80 Aligned_cols=55 Identities=15% Similarity=0.193 Sum_probs=36.1
Q ss_pred CCCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCC--C-----CCHHHHHHHHHhcCceEEEEc
Q 014951 6 VNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYD--T-----LGANAVEFIINHAEVSIAFVQ 63 (415)
Q Consensus 6 v~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~--~-----~~~~~l~~~l~~~~~~~ii~~ 63 (415)
.++||.|.+..+....+. .++...|+.++.++. . ...+++...++..++++|+..
T Consensus 108 ~~~gd~vl~~~p~y~~~~---~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~l~~~~~~~v~l~ 169 (390)
T 1d2f_A 108 SETGEGVVIHTPAYDAFY---KAIEGNQRTVMPVALEKQADGWFCDMGKLEAVLAKPECKIMLLC 169 (390)
T ss_dssp SCTTCEEEEEESCCHHHH---HHHHHTTCEEEEEECEECSSSEECCHHHHHHHHTSTTEEEEEEE
T ss_pred cCCCCEEEEcCCCcHHHH---HHHHHCCCEEEEeecccCCCccccCHHHHHHHhccCCCeEEEEe
Confidence 367888888777655543 334567876665543 1 577888888876567777653
No 119
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=30.29 E-value=1.4e+02 Score=26.45 Aligned_cols=58 Identities=7% Similarity=0.011 Sum_probs=40.0
Q ss_pred ccCCCCCCCeEEEEcCCcHhHHHHHHHHHHcCC-EEEecCCCCCHHHHHHHHHhcCceEEEEc
Q 014951 2 RSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAI-TYVPLYDTLGANAVEFIINHAEVSIAFVQ 63 (415)
Q Consensus 2 ~~~Gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~-~~~~l~~~~~~~~l~~~l~~~~~~~ii~~ 63 (415)
+..++++|++|+|...-.+-.+++++|-. .|+ .++.++. +++.+ .+++..+++.++..
T Consensus 184 ~~~~~~~g~~VlV~GaG~vG~~a~qlak~-~Ga~~Vi~~~~--~~~~~-~~a~~lGa~~vi~~ 242 (371)
T 1f8f_A 184 NALKVTPASSFVTWGAGAVGLSALLAAKV-CGASIIIAVDI--VESRL-ELAKQLGATHVINS 242 (371)
T ss_dssp TTTCCCTTCEEEEESCSHHHHHHHHHHHH-HTCSEEEEEES--CHHHH-HHHHHHTCSEEEET
T ss_pred hccCCCCCCEEEEECCCHHHHHHHHHHHH-cCCCeEEEECC--CHHHH-HHHHHcCCCEEecC
Confidence 34689999999999976678888888765 577 5665654 34444 34566777776653
No 120
>3kgw_A Alanine-glyoxylate aminotransferase; AAH25799.1, putative aminotransferase, structural genomics, center for structural genomics, JCSG; HET: PLP; 1.65A {Mus musculus} SCOP: c.67.1.3 PDB: 3kgx_A 3imz_A* 3r9a_A* 1h0c_A* 1j04_A*
Probab=30.06 E-value=1.5e+02 Score=26.02 Aligned_cols=58 Identities=14% Similarity=0.088 Sum_probs=37.2
Q ss_pred CCCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecC--C--CCCHHHHHHHHHhcCceEEEEcC
Q 014951 6 VNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLY--D--TLGANAVEFIINHAEVSIAFVQE 64 (415)
Q Consensus 6 v~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~--~--~~~~~~l~~~l~~~~~~~ii~~~ 64 (415)
+++||.|.+..+.... ....-++...|+.++.++ . ..+.+.++..++..++++++...
T Consensus 95 ~~~gd~vl~~~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~v~~~~ 156 (393)
T 3kgw_A 95 LEPGDSFLTGTNGIWG-MRAAEIADRIGARVHQMIKKPGEHYTLQEVEEGLAQHKPVLLFLVH 156 (393)
T ss_dssp CCTTCEEEEEESSHHH-HHHHHHHHHTTCEEEEEECCTTCCCCHHHHHHHHHHHCCSEEEEES
T ss_pred CCCCCEEEEEeCCchh-HHHHHHHHHcCCceEEEeCCCCCCCCHHHHHHHHhhCCCcEEEEec
Confidence 5789998887543321 122344556777666543 3 36788899888876788777664
No 121
>1c7n_A Cystalysin; transferase, aminotransferase, pyridoxal phosphate; HET: PLP; 1.90A {Treponema denticola} SCOP: c.67.1.3 PDB: 1c7o_A*
Probab=29.88 E-value=1.2e+02 Score=26.97 Aligned_cols=54 Identities=13% Similarity=0.065 Sum_probs=33.4
Q ss_pred CCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCCC-------CCHHHHHHHHHhcCceEEEEc
Q 014951 7 NPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDT-------LGANAVEFIINHAEVSIAFVQ 63 (415)
Q Consensus 7 ~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~~-------~~~~~l~~~l~~~~~~~ii~~ 63 (415)
++||.|.+..+....+. .++...|+.++.++.. ...+.+...++..++++|+..
T Consensus 111 ~~gd~vl~~~p~~~~~~---~~~~~~g~~~~~~~~~~~~g~~~~d~~~l~~~l~~~~~~~v~~~ 171 (399)
T 1c7n_A 111 KPGDGVIIITPVYYPFF---MAIKNQERKIIECELLEKDGYYTIDFQKLEKLSKDKNNKALLFC 171 (399)
T ss_dssp CTTCEEEECSSCCTHHH---HHHHTTTCEEEECCCEEETTEEECCHHHHHHHHTCTTEEEEEEE
T ss_pred CCCCEEEEcCCCcHhHH---HHHHHcCCEEEecccccCCCCEEEcHHHHHHHhccCCCcEEEEc
Confidence 57788777666544433 3345667777666542 567777777765566766653
No 122
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=29.82 E-value=1.1e+02 Score=26.39 Aligned_cols=55 Identities=7% Similarity=-0.028 Sum_probs=40.1
Q ss_pred ccCCCCCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEE
Q 014951 2 RSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAF 61 (415)
Q Consensus 2 ~~~Gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~ii 61 (415)
+..++++|++|+|...-.+-.+++++|-. .|+.++.+. + ++.+ .++++.+++.++
T Consensus 136 ~~~~~~~g~~VlV~GaG~vG~~a~qlak~-~Ga~Vi~~~-~--~~~~-~~~~~lGa~~v~ 190 (315)
T 3goh_A 136 EKIPLTKQREVLIVGFGAVNNLLTQMLNN-AGYVVDLVS-A--SLSQ-ALAAKRGVRHLY 190 (315)
T ss_dssp TTSCCCSCCEEEEECCSHHHHHHHHHHHH-HTCEEEEEC-S--SCCH-HHHHHHTEEEEE
T ss_pred hhcCCCCCCEEEEECCCHHHHHHHHHHHH-cCCEEEEEE-C--hhhH-HHHHHcCCCEEE
Confidence 35689999999999996678888888765 588777776 2 2333 334667888877
No 123
>2q3b_A Cysteine synthase A; pyridoxal-5'-phosphate, sulphur metabolism, cysteine biosynthesis, transferase; HET: LLP; 1.80A {Mycobacterium tuberculosis} PDB: 2q3c_A* 2q3d_A* 3rr2_A
Probab=29.71 E-value=1.2e+02 Score=26.10 Aligned_cols=58 Identities=7% Similarity=0.009 Sum_probs=41.0
Q ss_pred CCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEcCC
Q 014951 7 NPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQEN 65 (415)
Q Consensus 7 ~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~ii~~~~ 65 (415)
++|+.|.. ...+-.-..+.++|...|..+..+-|...+..-...++..++++++++..
T Consensus 65 ~~g~~vv~-assGN~g~alA~~a~~~G~~~~iv~p~~~~~~k~~~~~~~Ga~v~~~~~~ 122 (313)
T 2q3b_A 65 KPDTIILE-PTSGNTGIALAMVCAARGYRCVLTMPETMSLERRMLLRAYGAELILTPGA 122 (313)
T ss_dssp CTTCEEEE-ECSSHHHHHHHHHHHHHTCEEEEEEETTSCHHHHHHHHHTTCEEEEECGG
T ss_pred CCCCEEEE-eCCCHHHHHHHHHHHHcCCcEEEEECCCCCHHHHHHHHHCCCEEEEeCCC
Confidence 66776655 44455555566777899988877655555555666788999999998863
No 124
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=29.63 E-value=62 Score=28.81 Aligned_cols=56 Identities=13% Similarity=0.071 Sum_probs=38.0
Q ss_pred cCCCCCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEE
Q 014951 3 SRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFV 62 (415)
Q Consensus 3 ~~Gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~ii~ 62 (415)
+.++++||+|+|...-++-.+++++|-. .|+.++.+.. +++.+. .++...++.++.
T Consensus 189 ~~~~~~g~~VlV~GaG~vG~~aiqlak~-~Ga~Vi~~~~--~~~~~~-~a~~lGa~~vi~ 244 (369)
T 1uuf_A 189 HWQAGPGKKVGVVGIGGLGHMGIKLAHA-MGAHVVAFTT--SEAKRE-AAKALGADEVVN 244 (369)
T ss_dssp HTTCCTTCEEEEECCSHHHHHHHHHHHH-TTCEEEEEES--SGGGHH-HHHHHTCSEEEE
T ss_pred hcCCCCCCEEEEECCCHHHHHHHHHHHH-CCCEEEEEeC--CHHHHH-HHHHcCCcEEec
Confidence 4589999999999886678888888764 5887665554 333333 334566766654
No 125
>3nnk_A Ureidoglycine-glyoxylate aminotransferase; PLP-dependent; HET: LLP; 2.58A {Klebsiella pneumoniae}
Probab=29.52 E-value=1.5e+02 Score=26.33 Aligned_cols=58 Identities=10% Similarity=0.074 Sum_probs=37.0
Q ss_pred CCCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCC----CCCHHHHHHHHHhcCceEEEEcC
Q 014951 6 VNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYD----TLGANAVEFIINHAEVSIAFVQE 64 (415)
Q Consensus 6 v~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~----~~~~~~l~~~l~~~~~~~ii~~~ 64 (415)
+++||.|.+..+...... ..-++...|+.++.++. ....+.+...++..++++|+...
T Consensus 85 ~~~gd~Vl~~~~~~~~~~-~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~v~~~~ 146 (411)
T 3nnk_A 85 IRPGDKVLVPVFGRFGHL-LCEIARRCRAEVHTIEVPWGEVFTPDQVEDAVKRIRPRLLLTVQ 146 (411)
T ss_dssp CCTTCEEEEEECSHHHHH-HHHHHHHTTCEEEEEECCTTCCCCHHHHHHHHHHHCCSEEEEES
T ss_pred cCCCCEEEEecCCchHHH-HHHHHHHcCCeEEEEecCCCCCCCHHHHHHHHhhCCCeEEEEeC
Confidence 578999888776443211 23345566776665533 23678888888766778777764
No 126
>3l6b_A Serine racemase; pyridoxal phosphate, PLP, isomerase; HET: PLP; 1.50A {Homo sapiens} SCOP: c.79.1.0 PDB: 3l6r_A* 3hmk_A* 3l6c_A*
Probab=29.45 E-value=1e+02 Score=27.17 Aligned_cols=58 Identities=10% Similarity=0.008 Sum_probs=42.0
Q ss_pred CCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEcCCC
Q 014951 8 PGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENK 66 (415)
Q Consensus 8 ~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~ii~~~~~ 66 (415)
+.+.|... ..+-.-..+.++|.+.|..+..+-|...+..-...++..++++++++...
T Consensus 75 ~~~~vv~~-SsGNhg~a~A~aa~~~G~~~~iv~p~~~~~~k~~~~~~~GA~V~~v~~~~ 132 (346)
T 3l6b_A 75 KPKAVVTH-SSGNHGQALTYAAKLEGIPAYIVVPQTAPDCKKLAIQAYGASIVYCEPSD 132 (346)
T ss_dssp CCSCEEEE-CSSHHHHHHHHHHHHTTCCEEEEEETTSCHHHHHHHHHTTCEEEEECSSH
T ss_pred CCCEEEEe-CCCHHHHHHHHHHHHhCCCEEEEECCCCCHHHHHHHHHCCCEEEEECCCH
Confidence 34444444 34666666778899999888777666666667788899999999998754
No 127
>3ly1_A Putative histidinol-phosphate aminotransferase; structural G joint center for structural genomics, JCSG; HET: MSE PLP CIT; 1.80A {Erwinia carotovora atroseptica}
Probab=29.41 E-value=2e+02 Score=24.76 Aligned_cols=55 Identities=5% Similarity=-0.012 Sum_probs=39.1
Q ss_pred CCCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCC----CCCHHHHHHHHHh-cCceEEEEc
Q 014951 6 VNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYD----TLGANAVEFIINH-AEVSIAFVQ 63 (415)
Q Consensus 6 v~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~----~~~~~~l~~~l~~-~~~~~ii~~ 63 (415)
+++||.|.+..+....+. -++...|+.++.++. ....+++...+++ .++++++..
T Consensus 89 ~~~gd~vl~~~~~~~~~~---~~~~~~g~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~v~l~ 148 (354)
T 3ly1_A 89 ASLEAQLVIPELTYGDGE---HFAKIAGMKVTKVKMLDNWAFDIEGLKAAVAAYSGPSIVYLV 148 (354)
T ss_dssp CCTTCEEEEESSSCTHHH---HHHHHTTCEEEEECCCTTSCCCHHHHHHHHHTCSSCEEEEEE
T ss_pred hCCCCeEEECCCCchHHH---HHHHHcCCEEEEecCCCCCCCCHHHHHHHhccCCCCCEEEEe
Confidence 478999998877665543 445677887776643 3467889888875 578877764
No 128
>2duw_A Putative COA-binding protein; ligand binding protein; NMR {Klebsiella pneumoniae}
Probab=29.23 E-value=1e+02 Score=23.06 Aligned_cols=57 Identities=7% Similarity=-0.025 Sum_probs=37.2
Q ss_pred CeEEEEcCCcHhHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEcCCChhh
Q 014951 10 DRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPS 69 (415)
Q Consensus 10 d~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~ 69 (415)
|.|.++.| .....-+...|...|...+.+.+....+++...++..+..++ .+.+...
T Consensus 72 Dlvii~vp-~~~v~~v~~~~~~~g~~~i~i~~~~~~~~l~~~a~~~Gi~~i--gpnc~g~ 128 (145)
T 2duw_A 72 DMVDVFRN-SEAAWGVAQEAIAIGAKTLWLQLGVINEQAAVLAREAGLSVV--MDRCPAI 128 (145)
T ss_dssp SEEECCSC-STHHHHHHHHHHHHTCCEEECCTTCCCHHHHHHHHTTTCEEE--CSCCHHH
T ss_pred CEEEEEeC-HHHHHHHHHHHHHcCCCEEEEcCChHHHHHHHHHHHcCCEEE--cCCeeeE
Confidence 66777777 444444455677778777777777777888888887776643 4555443
No 129
>3cq5_A Histidinol-phosphate aminotransferase; PLP, PMP, amino-acid biosynthesis, histidine biosynthesis, pyridoxal phosphate; HET: PMP; 1.80A {Corynebacterium glutamicum} PDB: 3cq6_A* 3cq4_A
Probab=29.13 E-value=1.5e+02 Score=25.90 Aligned_cols=55 Identities=11% Similarity=0.122 Sum_probs=36.8
Q ss_pred CCCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCC----CCCHHHHHHHHHhcCceEEEEc
Q 014951 6 VNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYD----TLGANAVEFIINHAEVSIAFVQ 63 (415)
Q Consensus 6 v~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~----~~~~~~l~~~l~~~~~~~ii~~ 63 (415)
.++||.|.+..+....+. .++...|+.++.++. ....+++...++..++++++..
T Consensus 113 ~~~gd~Vl~~~~~y~~~~---~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~v~~~ 171 (369)
T 3cq5_A 113 GGPGRTALGFQPSYSMHP---ILAKGTHTEFIAVSRGADFRIDMDVALEEIRAKQPDIVFVT 171 (369)
T ss_dssp CSTTCEEEEEESSCTHHH---HHHHHTTCEEEEEECCTTSSCCHHHHHHHHHHHCCSEEEEE
T ss_pred cCCCCEEEEcCCChHHHH---HHHHHcCCEEEEecCCcCCCCCHHHHHHHhhccCCCEEEEe
Confidence 368899888877665543 345667877665543 3467888887776567777764
No 130
>3t18_A Aminotransferase class I and II; PSI-biology, MCSG, midwest center for structural genomics, P 5'-phosphate binding; HET: PLP; 2.86A {Anaerococcus prevotii} PDB: 4emy_A*
Probab=28.87 E-value=1.3e+02 Score=26.79 Aligned_cols=55 Identities=7% Similarity=0.120 Sum_probs=36.9
Q ss_pred CCCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCC-----CCCHHHHHHHHHhc---Cce-EEEEc
Q 014951 6 VNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYD-----TLGANAVEFIINHA---EVS-IAFVQ 63 (415)
Q Consensus 6 v~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~-----~~~~~~l~~~l~~~---~~~-~ii~~ 63 (415)
+++||.|.+..|.-..+. -++...|+.++.++. ....+.+...++.. +.+ +++..
T Consensus 122 ~~~gd~Vl~~~p~~~~~~---~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~vi~~ 185 (413)
T 3t18_A 122 LDEGDPLICHDYYWAPYR---KICEEFGRNFKTFEFFTDDFAFNIDVYKEAIDEGIRDSDRIASLIN 185 (413)
T ss_dssp CCSSCEEEEESSCCTHHH---HHHHHHTCEEEEECCBCTTSSBCHHHHHHHHHHHHHHCSEEEEEEE
T ss_pred cCCCCEEEECCCCcccHH---HHHHHhCCeEEEeeccCCCCCcCHHHHHHHHHHHhhcCCCEEEEEe
Confidence 468999998887655554 335567877776653 45778888888763 555 45544
No 131
>2z61_A Probable aspartate aminotransferase 2; amino acid aminotransferase, kynurenine aminotransferase, MJ0684, cytoplasm; HET: LLP; 2.20A {Methanococcus jannaschii}
Probab=28.75 E-value=1e+02 Score=27.08 Aligned_cols=52 Identities=12% Similarity=0.111 Sum_probs=32.4
Q ss_pred CCCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEc
Q 014951 6 VNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQ 63 (415)
Q Consensus 6 v~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~ii~~ 63 (415)
+++||.|.+..+....+. .++...|+.++.++ .+.+++...++. ++++++..
T Consensus 110 ~~~gd~vl~~~p~~~~~~---~~~~~~g~~~~~v~--~d~~~l~~~l~~-~~~~v~~~ 161 (370)
T 2z61_A 110 IDDGDEVLIQNPCYPCYK---NFIRFLGAKPVFCD--FTVESLEEALSD-KTKAIIIN 161 (370)
T ss_dssp CCTTCEEEEESSCCTHHH---HHHHHTTCEEEEEC--SSHHHHHHHCCS-SEEEEEEE
T ss_pred cCCCCEEEEeCCCchhHH---HHHHHcCCEEEEeC--CCHHHHHHhccc-CceEEEEc
Confidence 357788777776655443 33556777777776 567777666643 55555543
No 132
>3jx9_A Putative phosphoheptose isomerase; YP_001815198.1, structura genomics, joint center for structural genomics, JCSG; HET: MSE; 1.95A {Exiguobacterium sibiricum 255-15}
Probab=28.65 E-value=91 Score=24.26 Aligned_cols=39 Identities=10% Similarity=0.181 Sum_probs=27.7
Q ss_pred cCCCCCCCeEEEEcCCcHh--HHHHHHHHHHcCCEEEecCC
Q 014951 3 SRGVNPGDRCGIYGSNCPE--WIIAMEACNSQAITYVPLYD 41 (415)
Q Consensus 3 ~~Gv~~gd~V~l~~~n~~~--~~~~~lA~~~~G~~~~~l~~ 41 (415)
...++++|+|.++++.+.+ .+-....+-..|+.++.|.+
T Consensus 72 ~~~i~~~D~vii~S~Sg~n~~~ie~A~~ake~G~~vIaITs 112 (170)
T 3jx9_A 72 HKTLHAVDRVLIFTPDTERSDLLASLARYDAWHTPYSIITL 112 (170)
T ss_dssp TCCCCTTCEEEEEESCSCCHHHHHHHHHHHHHTCCEEEEES
T ss_pred cCCCCCCCEEEEEeCCCCCHHHHHHHHHHHHCCCcEEEEeC
Confidence 3478999999999998744 45555556667777666654
No 133
>3b8x_A WBDK, pyridoxamine 5-phosphate-dependent dehydrase; aspartate aminotransferase, colitose, perosamine, O-antigen, pyridoxal phosphate,; HET: G4M; 1.70A {Escherichia coli} PDB: 2gms_A* 2gmu_A* 2r0t_A* 3gr9_A*
Probab=28.35 E-value=1.3e+02 Score=26.67 Aligned_cols=55 Identities=4% Similarity=-0.011 Sum_probs=37.1
Q ss_pred CCCCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCC-----CCCHHHHHHHHHhcCceEEEEc
Q 014951 5 GVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYD-----TLGANAVEFIINHAEVSIAFVQ 63 (415)
Q Consensus 5 Gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~-----~~~~~~l~~~l~~~~~~~ii~~ 63 (415)
++++||.|.+..+....+.. ++...|+.++.++. ..+.+.+...++. ++++|+..
T Consensus 76 ~~~~g~~Vi~~~~~~~~~~~---~~~~~g~~~~~~~~~~~~~~~d~~~l~~~i~~-~~~~v~~~ 135 (390)
T 3b8x_A 76 RLKKGDEIIVPAVSWSTTYY---PLQQYGLRVKFVDIDINTLNIDIESLKEAVTD-STKAILTV 135 (390)
T ss_dssp SCCTTCEEEEESSSCHHHHH---HHHHTTCEEEEECBCTTTCSBCHHHHHHHCCT-TEEEEEEE
T ss_pred CCCCcCEEEECCCCcHHHHH---HHHHcCCEEEEEecCccccCcCHHHHHHHhCc-CCeEEEEE
Confidence 68999999888776655543 45568887765543 2367778777754 56766664
No 134
>3f9t_A TDC, L-tyrosine decarboxylase MFNA; NP_247014.1, L-tyrosine decarboxylase MFNA (EC 4.1.1.25), ST genomics; HET: PLP; 2.11A {Methanocaldococcus jannaschii}
Probab=28.10 E-value=1.7e+02 Score=25.67 Aligned_cols=56 Identities=7% Similarity=-0.057 Sum_probs=36.8
Q ss_pred CCCCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCCC----CCHHHHHHHHHhcCceEEEEc
Q 014951 5 GVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDT----LGANAVEFIINHAEVSIAFVQ 63 (415)
Q Consensus 5 Gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~~----~~~~~l~~~l~~~~~~~ii~~ 63 (415)
+-++||.|.+..+....+. -++...|+.++.++.. ++.+.+...++..++++++..
T Consensus 119 ~~~~gd~vl~~~~~~~~~~---~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~v~~~ 178 (397)
T 3f9t_A 119 SKNEHPKIIVPITAHFSFE---KGREMMDLEYIYAPIKEDYTIDEKFVKDAVEDYDVDGIIGI 178 (397)
T ss_dssp CCCSSCEEEEETTCCTHHH---HHHHHHTCEEEEECBCTTSSBCHHHHHHHHHHSCCCEEEEE
T ss_pred cCCCCeEEEECCcchhHHH---HHHHHcCceeEEEeeCCCCcCCHHHHHHHHhhcCCeEEEEE
Confidence 3457999988887666543 3344557766655433 478889998887566655544
No 135
>3n75_A LDC, lysine decarboxylase, inducible; pyridoxal-5'-phosphate dependent decarboxylase, acid stress stringent response; HET: LLP G4P P6G; 2.00A {Escherichia coli} PDB: 3q16_A*
Probab=27.90 E-value=1.9e+02 Score=28.58 Aligned_cols=56 Identities=7% Similarity=0.024 Sum_probs=40.3
Q ss_pred CCCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCCC---------C-----CHHHHHHHHHhc-Cce----EEEEcC
Q 014951 6 VNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDT---------L-----GANAVEFIINHA-EVS----IAFVQE 64 (415)
Q Consensus 6 v~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~~---------~-----~~~~l~~~l~~~-~~~----~ii~~~ 64 (415)
+++||.|.+--++..... -|+...|+.++.+++. . +.+.++..++.. +.+ +++++.
T Consensus 232 ~~pGD~VLv~r~~H~S~~---~~l~lsGa~pv~v~~~~~~~gi~~~i~~~~~d~e~Le~~l~~~~~~k~p~~vivt~p 306 (715)
T 3n75_A 232 APAGSTILIDRNCHKSLT---HLMMMSDVTPIYFRPTRNAYGILGGIPQSEFQHATIAKRVKETPNATWPVHAVITNS 306 (715)
T ss_dssp CCTTCEEEEESSCCHHHH---HHHHHSCCEEEEECCCBCTTCCBCCCCGGGGSHHHHHHHHHHSTTCCSCSEEEEESS
T ss_pred CCCCCEEEECCCccHHHH---HHHHHcCCEEEEEeccccccccccCcccccCCHHHHHHHHhhCcCccCceEEEEECC
Confidence 689999998877766554 3688899999888753 2 588899988764 333 555554
No 136
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=27.89 E-value=1.9e+02 Score=24.96 Aligned_cols=57 Identities=16% Similarity=0.141 Sum_probs=40.9
Q ss_pred cCCCCCCCeEEEEcC-CcHhHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEE
Q 014951 3 SRGVNPGDRCGIYGS-NCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFV 62 (415)
Q Consensus 3 ~~Gv~~gd~V~l~~~-n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~ii~ 62 (415)
..++++|++|+|... -.+-..++.+|. ..|+.++.+.. +.+.+....+..++..++.
T Consensus 144 ~~~~~~g~~vlI~Ga~g~iG~~~~~~a~-~~Ga~Vi~~~~--~~~~~~~~~~~~g~~~~~~ 201 (336)
T 4b7c_A 144 VGQPKNGETVVISGAAGAVGSVAGQIAR-LKGCRVVGIAG--GAEKCRFLVEELGFDGAID 201 (336)
T ss_dssp TTCCCTTCEEEESSTTSHHHHHHHHHHH-HTTCEEEEEES--SHHHHHHHHHTTCCSEEEE
T ss_pred hcCCCCCCEEEEECCCCHHHHHHHHHHH-HCCCEEEEEeC--CHHHHHHHHHHcCCCEEEE
Confidence 468999999999998 457777777665 57887776653 4566665547777776654
No 137
>3hvy_A Cystathionine beta-lyase family protein, YNBB B.S ortholog; NP_348457.1, putative cystathionine beta-lyase involved in A resistance; HET: LLP MSE; 2.00A {Clostridium acetobutylicum}
Probab=27.70 E-value=91 Score=28.47 Aligned_cols=58 Identities=10% Similarity=0.108 Sum_probs=39.1
Q ss_pred CCCCCeEEEEc-CCcHhHHHHHH---------HHHHcCCEEEecCC---CCCHHHHHHHHHh-cCceEEEEcC
Q 014951 6 VNPGDRCGIYG-SNCPEWIIAME---------ACNSQAITYVPLYD---TLGANAVEFIINH-AEVSIAFVQE 64 (415)
Q Consensus 6 v~~gd~V~l~~-~n~~~~~~~~l---------A~~~~G~~~~~l~~---~~~~~~l~~~l~~-~~~~~ii~~~ 64 (415)
++|||.|.+.. +...... .++ .+...|+.+..++. ..+.+++...++. .++++|+++.
T Consensus 113 l~pGD~Vl~~~~~~y~~~~-~~~g~~~~~~~~~l~~~G~~~~~v~~~~~~~d~e~l~~~i~~~~~tklV~i~~ 184 (427)
T 3hvy_A 113 LRPNDTMMSICGMPYDTLH-DIIGMDDSKKVGSLREYGVKYKMVDLKDGKVDINTVKEELKKDDSIKLIHIQR 184 (427)
T ss_dssp CCTTCEEEECSSSCCGGGH-HHHTCCTTCCSCCTGGGTCEEEECCCBTTBCCHHHHHHHHHHCTTEEEEEEES
T ss_pred cCCCCEEEEeCCCCchhHH-HHhccccchhhhHHHHcCCEEEEecCCCCCcCHHHHHHHhhCCCCCEEEEEEC
Confidence 68999988776 4333222 222 23457888887764 2677888888875 6788888877
No 138
>2v03_A Cysteine synthase B; pyridoxal phosphate, cysteine biosynthesis, transferase, ENZ kinetics, enzymatic sythesis of novel compounds; HET: LLP CIT; 1.33A {Escherichia coli} PDB: 2bhs_A* 2bht_A* 2jc3_A*
Probab=27.58 E-value=1.6e+02 Score=25.22 Aligned_cols=59 Identities=12% Similarity=0.003 Sum_probs=42.5
Q ss_pred CCCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEcCC
Q 014951 6 VNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQEN 65 (415)
Q Consensus 6 v~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~ii~~~~ 65 (415)
+++|+.|...+. +-.-..+.++|.+.|..++.+-|...+..-...++..++++++++..
T Consensus 58 ~~~g~~vv~~ss-GN~g~a~A~~a~~~G~~~~iv~p~~~~~~k~~~~~~~Ga~v~~~~~~ 116 (303)
T 2v03_A 58 IKPGDVLIEATS-GNTGIALAMIAALKGYRMKLLMPDNMSQERRAAMRAYGAELILVTKE 116 (303)
T ss_dssp CCTTCEEEEECS-SHHHHHHHHHHHHHTCEEEEEEETTSCHHHHHHHHHTTCEEEEECTT
T ss_pred CCCCCEEEEECC-cHHHHHHHHHHHHcCCcEEEEECCCCCHHHHHHHHHcCCEEEEECCC
Confidence 367777666654 55555666777899998887666555556667889999999999863
No 139
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=27.34 E-value=1.3e+02 Score=26.63 Aligned_cols=59 Identities=12% Similarity=-0.002 Sum_probs=43.4
Q ss_pred cCCCC-----CCCeEEEEc-CCcHhHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEcC
Q 014951 3 SRGVN-----PGDRCGIYG-SNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQE 64 (415)
Q Consensus 3 ~~Gv~-----~gd~V~l~~-~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~ii~~~ 64 (415)
..+++ +|++|+|.. .-.+-.+++++|-...|+.++.+.. +++.+ .++++.+++.++...
T Consensus 161 ~~~~~~~~~~~g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~--~~~~~-~~~~~lGad~vi~~~ 225 (363)
T 4dvj_A 161 RLDVNKPVPGAAPAILIVGGAGGVGSIAVQIARQRTDLTVIATAS--RPETQ-EWVKSLGAHHVIDHS 225 (363)
T ss_dssp TSCTTSCCTTSEEEEEEESTTSHHHHHHHHHHHHHCCSEEEEECS--SHHHH-HHHHHTTCSEEECTT
T ss_pred hhCcCcCcCCCCCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeC--CHHHH-HHHHHcCCCEEEeCC
Confidence 34666 899999998 6678898888888777888877765 34444 345678888877544
No 140
>4dq6_A Putative pyridoxal phosphate-dependent transferas; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PLP; 1.50A {Clostridium difficile} PDB: 4dgt_A*
Probab=27.31 E-value=1e+02 Score=27.10 Aligned_cols=53 Identities=9% Similarity=0.051 Sum_probs=31.1
Q ss_pred CCCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCCC--------CCHHHHHHHHHhcCceEEEEc
Q 014951 6 VNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDT--------LGANAVEFIINHAEVSIAFVQ 63 (415)
Q Consensus 6 v~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~~--------~~~~~l~~~l~~~~~~~ii~~ 63 (415)
+++||.|.+..+....+. .++...|+.++.++.. ...+.+...++. +++++..
T Consensus 111 ~~~gd~vl~~~~~~~~~~---~~~~~~g~~~~~~~~~~~~~~~~~~d~~~l~~~l~~--~~~v~i~ 171 (391)
T 4dq6_A 111 TKANDKIMIQEPVYSPFN---SVVKNNNRELIISPLQKLENGNYIMDYEDIENKIKD--VKLFILC 171 (391)
T ss_dssp SCTTCEEEECSSCCTHHH---HHHHHTTCEEEECCCEECTTSCEECCHHHHHHHCTT--EEEEEEE
T ss_pred CCCCCEEEEcCCCCHHHH---HHHHHcCCeEEeeeeeecCCCceEeeHHHHHHHhhc--CCEEEEE
Confidence 357777776665544432 3445667776665543 466777776665 5555443
No 141
>1e5e_A MGL, methionine gamma-lyase; methionine biosynthesis, PLP-dependent enzymes, C-S gamma lyase; HET: PPJ; 2.18A {Trichomonas vaginalis} SCOP: c.67.1.3 PDB: 1e5f_A*
Probab=27.29 E-value=1.4e+02 Score=26.81 Aligned_cols=56 Identities=13% Similarity=0.003 Sum_probs=31.3
Q ss_pred CCCCCeEEEEcCCcHhHHHHHH-HHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEc
Q 014951 6 VNPGDRCGIYGSNCPEWIIAME-ACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQ 63 (415)
Q Consensus 6 v~~gd~V~l~~~n~~~~~~~~l-A~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~ii~~ 63 (415)
+++||.|.+..+....+.-.+- ++...|+.++.++.. ..+.+...++. ++++|+..
T Consensus 98 ~~~gd~Vl~~~~~y~~~~~~~~~~~~~~g~~~~~v~~~-d~~~l~~~i~~-~t~~v~l~ 154 (404)
T 1e5e_A 98 LKAGDHLISDECLYGCTHALFEHALTKFGIQVDFINTA-IPGEVKKHMKP-NTKIVYFE 154 (404)
T ss_dssp CCTTCEEEEESCCCHHHHHHHHTHHHHTTCEEEEECTT-STTHHHHHCCT-TEEEEEEE
T ss_pred hCCCCEEEEeCCCchhHHHHHHHHHHHcCCEEEEECCC-CHHHHHHhcCC-CCcEEEEE
Confidence 3577777777665554433221 355567777666544 45555555542 45555554
No 142
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=27.20 E-value=87 Score=28.13 Aligned_cols=53 Identities=15% Similarity=0.071 Sum_probs=37.3
Q ss_pred cCCCCCCCeEEEEcCCcHhHHHHHHHHHHcCC-EEEecCCCCCHHHHHHHHHhcCceE
Q 014951 3 SRGVNPGDRCGIYGSNCPEWIIAMEACNSQAI-TYVPLYDTLGANAVEFIINHAEVSI 59 (415)
Q Consensus 3 ~~Gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~-~~~~l~~~~~~~~l~~~l~~~~~~~ 59 (415)
..++++|++|+|...-.+-.+++++|-. .|+ .++.++. +.+.+. +++..+++.
T Consensus 180 ~~~~~~g~~VlV~GaG~vG~~aiqlAk~-~Ga~~Vi~~~~--~~~~~~-~a~~lGa~~ 233 (398)
T 1kol_A 180 TAGVGPGSTVYVAGAGPVGLAAAASARL-LGAAVVIVGDL--NPARLA-HAKAQGFEI 233 (398)
T ss_dssp HTTCCTTCEEEEECCSHHHHHHHHHHHH-TTCSEEEEEES--CHHHHH-HHHHTTCEE
T ss_pred HcCCCCCCEEEEECCcHHHHHHHHHHHH-CCCCeEEEEcC--CHHHHH-HHHHcCCcE
Confidence 4579999999999976678888888764 587 5555543 344443 456778773
No 143
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=27.17 E-value=75 Score=28.02 Aligned_cols=56 Identities=13% Similarity=0.065 Sum_probs=39.0
Q ss_pred cCCCCCCCeEEEEcCCcHhHHHHHHHHHHcCC-EEEecCCCCCHHHHHHHHHhcCceEEEE
Q 014951 3 SRGVNPGDRCGIYGSNCPEWIIAMEACNSQAI-TYVPLYDTLGANAVEFIINHAEVSIAFV 62 (415)
Q Consensus 3 ~~Gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~-~~~~l~~~~~~~~l~~~l~~~~~~~ii~ 62 (415)
..++++|++|+|...-++-.+++++|-. .|+ .++.++. +.+.+ .+++..+++.++.
T Consensus 166 ~~~~~~g~~VlV~GaG~vG~~aiqlak~-~Ga~~Vi~~~~--~~~~~-~~a~~lGa~~vi~ 222 (356)
T 1pl8_A 166 RGGVTLGHKVLVCGAGPIGMVTLLVAKA-MGAAQVVVTDL--SATRL-SKAKEIGADLVLQ 222 (356)
T ss_dssp HHTCCTTCEEEEECCSHHHHHHHHHHHH-TTCSEEEEEES--CHHHH-HHHHHTTCSEEEE
T ss_pred hcCCCCCCEEEEECCCHHHHHHHHHHHH-cCCCEEEEECC--CHHHH-HHHHHhCCCEEEc
Confidence 3478999999999976678888888764 687 6666654 34443 3456777776664
No 144
>3nyq_A Malonyl-COA ligase; A/B topology ababa sandwich beta-barrel adenylate-forming EN fold; HET: MCA AMP; 1.43A {Streptomyces coelicolor} PDB: 3nyr_A*
Probab=27.01 E-value=2.1e+02 Score=26.59 Aligned_cols=76 Identities=11% Similarity=0.043 Sum_probs=56.6
Q ss_pred EEeecHHHHHHhhhhhhhhhhccccCCCCCEEEEeCChhhHHHHHHHHHhhhcCcEEEEeCC--CHHHHHHHHHhhCCeE
Q 014951 145 VVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTM 222 (415)
Q Consensus 145 v~~th~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~vv~~~~--~~~~~~~~i~~~~~t~ 222 (415)
-.+|.+.+......+...+ ..++++..+++-+. -....+++++..|+..+.+.. ..+++...++..++..
T Consensus 47 ~~~Ty~eL~~~~~~~A~~L-------~~~~~V~i~~~~~~-~~~~~~la~~~~Ga~~vpl~~~~~~~~l~~il~~~~~~~ 118 (505)
T 3nyq_A 47 RSLTYAELAAAAGATAGRI-------GGAGRVAVWATPAM-ETGVAVVAALLAGVAAVPLNPKSGDKELAHILSDSAPSL 118 (505)
T ss_dssp EEEEHHHHHHHHHHHHTTC-------C---CEEEECCSSH-HHHHHHHHHHHHTCCEEEECTTCCHHHHHHHHHHHCCSE
T ss_pred eeeeHHHHHHHHHHHHhhc-------cCCCEEEEEcCCCH-HHHHHHHHHHHhCCEEEEcCCCCCHHHHHHHHHHCCCCE
Confidence 4789999988888776544 34778887777643 233457788889999998876 8889999999999999
Q ss_pred EEeCcH
Q 014951 223 FSGVPR 228 (415)
Q Consensus 223 ~~~~P~ 228 (415)
+...+.
T Consensus 119 vi~~~~ 124 (505)
T 3nyq_A 119 VLAPPD 124 (505)
T ss_dssp EEECTT
T ss_pred EEECCc
Confidence 988653
No 145
>1vjo_A Alanine--glyoxylate aminotransferase; 17130350, ALR1004, STR genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: PLP; 1.70A {Nostoc SP} SCOP: c.67.1.3
Probab=26.97 E-value=1.7e+02 Score=25.70 Aligned_cols=58 Identities=10% Similarity=0.050 Sum_probs=36.5
Q ss_pred CCCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCC----CCCHHHHHHHHHhcCceEEEEcC
Q 014951 6 VNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYD----TLGANAVEFIINHAEVSIAFVQE 64 (415)
Q Consensus 6 v~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~----~~~~~~l~~~l~~~~~~~ii~~~ 64 (415)
+++||.|.+..+..... ...-++...|+.++.++. ..+.+++...++..++++++...
T Consensus 106 ~~~gd~Vl~~~~~~~~~-~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~~v~~~~ 167 (393)
T 1vjo_A 106 VEPGDVVLIGVAGYFGN-RLVDMAGRYGADVRTISKPWGEVFSLEELRTALETHRPAILALVH 167 (393)
T ss_dssp CCTTCEEEEEESSHHHH-HHHHHHHHTTCEEEEEECCTTCCCCHHHHHHHHHHHCCSEEEEES
T ss_pred cCCCCEEEEEcCChhHH-HHHHHHHHcCCceEEEecCCCCCCCHHHHHHHHhhCCceEEEEec
Confidence 46899988877654431 123335567776665543 36788888888764667666653
No 146
>1mdo_A ARNB aminotransferase; type 1 aminotransferase fold; HET: MSE PMP; 1.70A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1mdx_A* 1mdz_A*
Probab=26.90 E-value=91 Score=27.58 Aligned_cols=55 Identities=11% Similarity=0.031 Sum_probs=35.8
Q ss_pred CCCCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecC--C---CCCHHHHHHHHHhcCceEEEEc
Q 014951 5 GVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLY--D---TLGANAVEFIINHAEVSIAFVQ 63 (415)
Q Consensus 5 Gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~--~---~~~~~~l~~~l~~~~~~~ii~~ 63 (415)
++++||.|.+..+....+. -++...|+.++.++ + ....+.+...++. ++++|+..
T Consensus 75 ~~~~gd~Vl~~~~~~~~~~---~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~-~~~~v~~~ 134 (393)
T 1mdo_A 75 GIGEGDEVITPSMTWVSTL---NMIVLLGANPVMVDVDRDTLMVTPEHIEAAITP-QTKAIIPV 134 (393)
T ss_dssp TCCTTCEEEEESSSCHHHH---HHHHHTTCEEEEECBCTTTCCBCHHHHHHHCCT-TEEEECCB
T ss_pred CCCCCCEEEeCCCccHhHH---HHHHHCCCEEEEEeccCCcCCCCHHHHHHhcCC-CceEEEEe
Confidence 4688999888777665543 34556787766554 2 2567777776653 56776654
No 147
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=26.58 E-value=1.2e+02 Score=26.93 Aligned_cols=56 Identities=11% Similarity=0.223 Sum_probs=38.7
Q ss_pred cCCCCCCCeEEEEcCCcHhHHHHHHHHHHcCC-EEEecCCCCCHHHHHHHHHhcCceEEEE
Q 014951 3 SRGVNPGDRCGIYGSNCPEWIIAMEACNSQAI-TYVPLYDTLGANAVEFIINHAEVSIAFV 62 (415)
Q Consensus 3 ~~Gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~-~~~~l~~~~~~~~l~~~l~~~~~~~ii~ 62 (415)
..++++||+|+|...-.+-.+++++|-. .|+ .++.++. +++.+. +++...++.++.
T Consensus 190 ~~~~~~g~~VlV~GaG~vG~~aiqlak~-~Ga~~Vi~~~~--~~~~~~-~a~~lGa~~vi~ 246 (376)
T 1e3i_A 190 TAKVTPGSTCAVFGLGCVGLSAIIGCKI-AGASRIIAIDI--NGEKFP-KAKALGATDCLN 246 (376)
T ss_dssp TSCCCTTCEEEEECCSHHHHHHHHHHHH-TTCSEEEEECS--CGGGHH-HHHHTTCSEEEC
T ss_pred hcCCCCCCEEEEECCCHHHHHHHHHHHH-cCCCeEEEEcC--CHHHHH-HHHHhCCcEEEc
Confidence 4689999999999976678888887764 687 5666654 233333 345677776663
No 148
>2egu_A Cysteine synthase; O-acetylserine sulfhydrase, structural genomics, NPPSFA, NAT project on protein structural and functional analyses; 1.90A {Geobacillus kaustophilus}
Probab=26.49 E-value=1.3e+02 Score=25.75 Aligned_cols=58 Identities=9% Similarity=-0.003 Sum_probs=40.5
Q ss_pred CCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEcCC
Q 014951 7 NPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQEN 65 (415)
Q Consensus 7 ~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~ii~~~~ 65 (415)
++|+.|.. ...+-.-..+.++|...|..+..+-|...+..-...++..++++++++..
T Consensus 63 ~~g~~vv~-assGN~g~a~A~~a~~~G~~~~iv~p~~~~~~k~~~~~~~GA~v~~~~~~ 120 (308)
T 2egu_A 63 KPGDTIVE-PTSGNTGIGLAMVAAAKGYKAVLVMPDTMSLERRNLLRAYGAELVLTPGA 120 (308)
T ss_dssp CTTCEEEE-ECCHHHHHHHHHHHHHHTCEEEEEEESCSCHHHHHHHHHTTCEEEEECGG
T ss_pred CCCCEEEE-eCCCHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHcCCEEEEECCC
Confidence 56666655 44455555667777889988877655544555566789999999998764
No 149
>1zl0_A Hypothetical protein PA5198; structural genomics, PSI, PROT structure initiative, midwest center for structural genomic unknown function; HET: TLA PEG; 1.10A {Pseudomonas aeruginosa} SCOP: c.8.10.1 c.23.16.7 PDB: 1zrs_A 2aum_A 2aun_A
Probab=26.38 E-value=2.1e+02 Score=24.74 Aligned_cols=62 Identities=5% Similarity=0.032 Sum_probs=39.8
Q ss_pred CCCCCCCeEEEEcCCcH---hHHHHHHH-HHHcCCEEEecCCC------------CCHHHHHHHHHhcCceEEEEcCC
Q 014951 4 RGVNPGDRCGIYGSNCP---EWIIAMEA-CNSQAITYVPLYDT------------LGANAVEFIINHAEVSIAFVQEN 65 (415)
Q Consensus 4 ~Gv~~gd~V~l~~~n~~---~~~~~~lA-~~~~G~~~~~l~~~------------~~~~~l~~~l~~~~~~~ii~~~~ 65 (415)
.-+++||+|+|++|.+. +.+-.... +-..|..++.-+.. .-+++|...+.+-++++|++..-
T Consensus 12 ~~L~~Gd~I~ivaPSs~~~~~~~~~~~~~L~~~G~~v~~~~~~~~~~~~~agtd~~Ra~dL~~a~~Dp~i~aI~~~rG 89 (311)
T 1zl0_A 12 TWQPIDGRVALIAPASAIATDVLEATLRQLEVHGVDYHLGRHVEARYRYLAGTVEQRLEDLHNAFDMPDITAVWCLRG 89 (311)
T ss_dssp CCCCCCSEEEEECCSBCCCHHHHHHHHHHHHHTTCCEEECTTTTCCBTTBSSCHHHHHHHHHHHHHSTTEEEEEESCC
T ss_pred ccCCCcCEEEEEeCCCCCCHHHHHHHHHHHHhCCCEEEECccccccccccCCCHHHHHHHHHHHHhCCCCCEEEEccC
Confidence 45899999999999873 22211111 22367777643211 12356888888889999999753
No 150
>2huf_A Alanine glyoxylate aminotransferase; alpha and beta protein, PLP-dependent transferase; HET: LLP; 1.75A {Aedes aegypti} PDB: 2hui_A* 2huu_A*
Probab=26.24 E-value=1.8e+02 Score=25.52 Aligned_cols=58 Identities=10% Similarity=0.006 Sum_probs=35.6
Q ss_pred CCCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecC--C--CCCHHHHHHHHHhcCceEEEEcC
Q 014951 6 VNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLY--D--TLGANAVEFIINHAEVSIAFVQE 64 (415)
Q Consensus 6 v~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~--~--~~~~~~l~~~l~~~~~~~ii~~~ 64 (415)
+++||.|.+..+...... ..-.+...|+.++.++ + ..+.+.+...++..++++|+...
T Consensus 91 ~~~gd~vl~~~~~~~~~~-~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~v~~~~ 152 (393)
T 2huf_A 91 LEDGDVILIGHTGHWGDR-SADMATRYGADVRVVKSKVGQSLSLDEIRDALLIHKPSVLFLTQ 152 (393)
T ss_dssp CCTTCEEEEEESSHHHHH-HHHHHHHTTCEEEEEECCTTCCCCHHHHHHHHHHHCCSEEEEES
T ss_pred hCCCCEEEEECCCcchHH-HHHHHHHcCCeeEEEeCCCCCCCCHHHHHHHHhccCCcEEEEEc
Confidence 468998888877554432 1112345677665554 2 35678888888764677776643
No 151
>2pqm_A Cysteine synthase; OASS, PLP, lyase; HET: PLP; 1.86A {Entamoeba histolytica} PDB: 3bm5_A*
Probab=26.08 E-value=1.4e+02 Score=26.16 Aligned_cols=59 Identities=10% Similarity=-0.024 Sum_probs=41.3
Q ss_pred CCCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEcCC
Q 014951 6 VNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQEN 65 (415)
Q Consensus 6 v~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~ii~~~~ 65 (415)
+++|+.|...+. +-.-..+.++|...|..++.+-|...+..-...++..++++++++..
T Consensus 75 ~~~g~~vv~aSs-GN~g~alA~aa~~~G~~~~iv~p~~~~~~k~~~~~~~GA~V~~~~~~ 133 (343)
T 2pqm_A 75 LKPGMEIIESTS-GNTGIALCQAGAVFGYRVNIAMPSTMSVERQMIMKAFGAELILTEGK 133 (343)
T ss_dssp SCTTCEEEEECS-SHHHHHHHHHHHHHTCCEEEEEETTSCHHHHHHHHHTTCEEEEECGG
T ss_pred CCCCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHCCCEEEEECCC
Confidence 367776666654 55555566777789987777655545556667888999999998763
No 152
>3lvm_A Cysteine desulfurase; structural genomics, montreal-kingston bacterial structural genomics initiative, BSGI, transferase; HET: PLP; 2.05A {Escherichia coli} PDB: 3lvk_A* 3lvl_B* 3lvj_A* 1p3w_B*
Probab=25.50 E-value=1.5e+02 Score=26.36 Aligned_cols=56 Identities=5% Similarity=0.035 Sum_probs=33.0
Q ss_pred CCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCCC----CCHHHHHHHHHhcCceEEEEcC
Q 014951 8 PGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDT----LGANAVEFIINHAEVSIAFVQE 64 (415)
Q Consensus 8 ~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~~----~~~~~l~~~l~~~~~~~ii~~~ 64 (415)
+||.|.+..+..+.+...+..+...|+.++.++.. ...+++...++. ++++++...
T Consensus 112 ~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-~~~~v~~~~ 171 (423)
T 3lvm_A 112 KGKHIITSKTEHKAVLDTCRQLEREGFEVTYLAPQRNGIIDLKELEAAMRD-DTILVSIMH 171 (423)
T ss_dssp TCCEEEEETTSCHHHHHHHHHHHHTTCEEEEECCCTTSCCCHHHHHHHCCT-TEEEEECCS
T ss_pred CCCEEEECCccchHHHHHHHHHHHcCCEEEEeccCCCCccCHHHHHHhcCC-CcEEEEEeC
Confidence 68888777766666554444445567666655432 356666666643 556666543
No 153
>2dr1_A PH1308 protein, 386AA long hypothetical serine aminotransferase; PLP, structural genomics, NPPSFA; HET: PLP; 1.90A {Pyrococcus horikoshii}
Probab=25.43 E-value=2e+02 Score=25.10 Aligned_cols=58 Identities=12% Similarity=0.021 Sum_probs=36.0
Q ss_pred CCCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCC----CCCHHHHHHHHHh-cCceEEEEcC
Q 014951 6 VNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYD----TLGANAVEFIINH-AEVSIAFVQE 64 (415)
Q Consensus 6 v~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~----~~~~~~l~~~l~~-~~~~~ii~~~ 64 (415)
+++||.|.+..+..... ...-++...|+.++.++. ..+.+++...++. -++++|+...
T Consensus 92 ~~~gd~vl~~~~~~~~~-~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~~~v~~~~ 154 (386)
T 2dr1_A 92 VSKGGKVLVTIIGAFGK-RYKEVVESNGRKAVVLEYEPGKAVKPEDLDDALRKNPDVEAVTITY 154 (386)
T ss_dssp SCTTCEEEEEESSHHHH-HHHHHHHHTTCEEEEEECCTTCCCCHHHHHHHHHHCTTCCEEEEES
T ss_pred hcCCCeEEEEcCCchhH-HHHHHHHHhCCceEEEecCCCCCCCHHHHHHHHhcCCCCcEEEEEe
Confidence 46888888877654431 123344567776665543 2678888888864 4677776653
No 154
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=25.41 E-value=1.3e+02 Score=26.64 Aligned_cols=56 Identities=9% Similarity=0.128 Sum_probs=38.3
Q ss_pred cCCCCCCCeEEEEcCCcHhHHHHHHHHHHcCC-EEEecCCCCCHHHHHHHHHhcCceEEEE
Q 014951 3 SRGVNPGDRCGIYGSNCPEWIIAMEACNSQAI-TYVPLYDTLGANAVEFIINHAEVSIAFV 62 (415)
Q Consensus 3 ~~Gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~-~~~~l~~~~~~~~l~~~l~~~~~~~ii~ 62 (415)
..++++|++|+|...-.+-.+++++|-. .|+ .++.++. +++.+. +++..+++.++.
T Consensus 186 ~~~~~~g~~VlV~GaG~vG~~a~qla~~-~Ga~~Vi~~~~--~~~~~~-~~~~lGa~~vi~ 242 (374)
T 2jhf_A 186 VAKVTQGSTCAVFGLGGVGLSVIMGCKA-AGAARIIGVDI--NKDKFA-KAKEVGATECVN 242 (374)
T ss_dssp TTCCCTTCEEEEECCSHHHHHHHHHHHH-TTCSEEEEECS--CGGGHH-HHHHTTCSEEEC
T ss_pred ccCCCCCCEEEEECCCHHHHHHHHHHHH-cCCCeEEEEcC--CHHHHH-HHHHhCCceEec
Confidence 4689999999999976678888887765 587 5665654 233333 345677776663
No 155
>3ss7_X D-serine dehydratase; type II fold, ALFA,beta-elimination, P 5'-phosphate, lyase; HET: PLP; 1.55A {Escherichia coli} PDB: 3ss9_X* 3r0x_A* 3r0z_A
Probab=25.35 E-value=1.5e+02 Score=27.12 Aligned_cols=57 Identities=5% Similarity=-0.168 Sum_probs=42.1
Q ss_pred EEEEcCCcHhHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEcCCChh
Q 014951 12 CGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIP 68 (415)
Q Consensus 12 V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~ 68 (415)
..+....+-.-..+.++|.+.|..++.+-|...+..-...++..++++++++..+.+
T Consensus 162 ~vv~aSsGNhg~avA~~aa~~G~~~~Ivmp~~~~~~k~~~~r~~GA~Vv~v~~~~~~ 218 (442)
T 3ss7_X 162 SIAVGSTGNLGLSIGIMSARIGFKVTVHMSADARAWKKAKLRSHGVTVVEYEQDYGV 218 (442)
T ss_dssp EEEEECSSHHHHHHHHHHHHHTCEEEEEEETTSCHHHHHHHHHTTCEEEEESSCHHH
T ss_pred EEEEECCCHHHHHHHHHHHHhCCcEEEEECCCCCHHHHHHHHHCCCEEEEECCCHHH
Confidence 445555566666777788899988877666656666777889999999999876533
No 156
>2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A*
Probab=25.25 E-value=1.3e+02 Score=22.45 Aligned_cols=49 Identities=8% Similarity=-0.054 Sum_probs=34.8
Q ss_pred CeEEEEcCCcHhHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceE
Q 014951 10 DRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSI 59 (415)
Q Consensus 10 d~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~ 59 (415)
|.|.|+.|. ....-+.-.|...|+..+.+.+....+++....+..+..+
T Consensus 79 Dlvvi~vp~-~~~~~vv~~~~~~gi~~i~~~~g~~~~~l~~~a~~~Gi~v 127 (144)
T 2d59_A 79 EVVDLFVKP-KLTMEYVEQAIKKGAKVVWFQYNTYNREASKKADEAGLII 127 (144)
T ss_dssp SEEEECSCH-HHHHHHHHHHHHHTCSEEEECTTCCCHHHHHHHHHTTCEE
T ss_pred CEEEEEeCH-HHHHHHHHHHHHcCCCEEEECCCchHHHHHHHHHHcCCEE
Confidence 566666555 4445555577788877777777777888888888888773
No 157
>2w8t_A SPT, serine palmitoyltransferase; HET: LLP; 1.25A {Sphingomonas paucimobilis} PDB: 2w8u_A* 2w8w_A* 2xbn_A* 2w8j_A* 2w8v_A* 2jg2_A* 2jgt_A 2x8u_A*
Probab=25.17 E-value=2.4e+02 Score=25.30 Aligned_cols=55 Identities=5% Similarity=0.132 Sum_probs=39.5
Q ss_pred CCCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhc---CceEEEEcC
Q 014951 6 VNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHA---EVSIAFVQE 64 (415)
Q Consensus 6 v~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~---~~~~ii~~~ 64 (415)
.++||.|.+..+....+. -++...|+.++.++ ....+.++..++.. ++++|+++.
T Consensus 145 ~~~gd~vl~~~~~h~~~~---~~~~~~g~~~~~~~-~~d~~~le~~l~~~~~~~~~~v~~~~ 202 (427)
T 2w8t_A 145 AGKGEYVILDADSHASIY---DGCQQGNAEIVRFR-HNSVEDLDKRLGRLPKEPAKLVVLEG 202 (427)
T ss_dssp SCTTCEEEEETTCCHHHH---HHHHHSCSEEEEEC-TTCHHHHHHHHHTSCSSSCEEEEEES
T ss_pred cCCCCEEEECCcccHHHH---HHHHHcCCeeEEeC-CCCHHHHHHHHHhccCCCCeEEEEcC
Confidence 368898888777665543 44567788888775 46788888888775 677777764
No 158
>1fc4_A 2-amino-3-ketobutyrate conenzyme A ligase; 2-amino-3-ketobutyrate COA ligase, pyridoxal phosphate, COEN transferase, structural genomics; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.4
Probab=24.96 E-value=2.2e+02 Score=25.08 Aligned_cols=55 Identities=7% Similarity=-0.049 Sum_probs=38.5
Q ss_pred CCCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhc-----CceEEEEcC
Q 014951 6 VNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHA-----EVSIAFVQE 64 (415)
Q Consensus 6 v~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~-----~~~~ii~~~ 64 (415)
.++||.|.+-.+....+ .-++...|+.++.++ ..+.+.++..++.. ++++|+...
T Consensus 126 ~~~gd~v~~~~~~~~~~---~~~~~~~g~~~~~~~-~~d~~~l~~~l~~~~~~~~~~~~v~~~~ 185 (401)
T 1fc4_A 126 LGAEDAIISDALNHASI---IDGVRLCKAKRYRYA-NNDMQELEARLKEAREAGARHVLIATDG 185 (401)
T ss_dssp CCTTCEEEEETTCCHHH---HHHHHTSCSEEEEEC-TTCHHHHHHHHHHHHHTTCSSEEEEEES
T ss_pred cCCCCEEEEcchhHHHH---HHHHHHcCCceEEEC-CCCHHHHHHHHHHhhccCCCceEEEEeC
Confidence 46899888776655433 235667899888876 45678888888764 677777654
No 159
>3euc_A Histidinol-phosphate aminotransferase 2; YP_297314.1, structur genomics, joint center for structural genomics, JCSG; HET: MSE; 2.05A {Ralstonia eutropha JMP134} SCOP: c.67.1.0
Probab=24.94 E-value=1e+02 Score=26.95 Aligned_cols=55 Identities=13% Similarity=0.182 Sum_probs=39.2
Q ss_pred CCCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecC--C--CCCHHHHHHHHHhcCceEEEEc
Q 014951 6 VNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLY--D--TLGANAVEFIINHAEVSIAFVQ 63 (415)
Q Consensus 6 v~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~--~--~~~~~~l~~~l~~~~~~~ii~~ 63 (415)
+++||.|.+..+....+. .++...|+.++.++ + ....+.+...++..++++|+..
T Consensus 106 ~~~gd~Vl~~~~~~~~~~---~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~~v~~~ 164 (367)
T 3euc_A 106 ARPGAKVMAPVPGFVMYA---MSAQFAGLEFVGVPLRADFTLDRGAMLAAMAEHQPAIVYLA 164 (367)
T ss_dssp CCTTCEEEEEESCSCCSC---HHHHTTTCEEEEEECCTTSCCCHHHHHHHHHHHCCSEEEEE
T ss_pred cCCCCEEEEcCCCHHHHH---HHHHHcCCeEEEecCCCCCCCCHHHHHHHhhccCCCEEEEc
Confidence 478999998877655543 23556787766554 3 4578899999887778887775
No 160
>3tqx_A 2-amino-3-ketobutyrate coenzyme A ligase; energy metabolism, transferase; HET: PLP; 2.30A {Coxiella burnetii}
Probab=24.81 E-value=1.7e+02 Score=25.74 Aligned_cols=55 Identities=9% Similarity=0.011 Sum_probs=40.4
Q ss_pred CCCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhc-----CceEEEEcC
Q 014951 6 VNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHA-----EVSIAFVQE 64 (415)
Q Consensus 6 v~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~-----~~~~ii~~~ 64 (415)
+++||.|.+-.+....+ .-++...|+.+++++. ...+.++..++.. +++++++..
T Consensus 124 ~~~gd~v~~~~~~~~~~---~~~~~~~g~~~~~~~~-~d~~~l~~~l~~~~~~~~~~~~v~~~~ 183 (399)
T 3tqx_A 124 LGPEDAIISDELNHASI---IDGIRLCKAQRYRYKN-NAMGDLEAKLKEADEKGARFKLIATDG 183 (399)
T ss_dssp CCTTCEEEEETTCCHHH---HHHHHSCCSEEEEECT-TCTTHHHHHHHHHHTTTCSSEEEEEES
T ss_pred cCCCCEEEECCcccHHH---HHHHHHcCCceeEeCC-CCHHHHHHHHHhhhccCCCceEEEEeC
Confidence 46899998887766654 3356778888887764 5667888888775 777887765
No 161
>1y80_A Predicted cobalamin binding protein; corrinoid, factor IIIM, methyl transferase, structural genomics, PSI, protein structure initiative; HET: B1M; 1.70A {Moorella thermoacetica}
Probab=24.66 E-value=2.6e+02 Score=22.18 Aligned_cols=57 Identities=7% Similarity=-0.149 Sum_probs=45.5
Q ss_pred CCeEEEEcCC----cHhHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEcCC
Q 014951 9 GDRCGIYGSN----CPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQEN 65 (415)
Q Consensus 9 gd~V~l~~~n----~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~ii~~~~ 65 (415)
+-+|.+.+.. .....++...+-..|.-+.-+....+.+++...++..+|++|..+..
T Consensus 88 ~~~vll~~~~gd~H~iG~~~va~~l~~~G~~v~~LG~~vp~~~l~~~~~~~~~d~v~lS~~ 148 (210)
T 1y80_A 88 VGKIVLGTVKGDLHDIGKNLVAMMLESGGFTVYNLGVDIEPGKFVEAVKKYQPDIVGMSAL 148 (210)
T ss_dssp CCEEEEEEBTTCCCCHHHHHHHHHHHHTTCEEEECCSSBCHHHHHHHHHHHCCSEEEEECC
T ss_pred CCEEEEEeCCCcccHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEecc
Confidence 3366666554 35566666667789999999999999999999999999999998764
No 162
>3ndn_A O-succinylhomoserine sulfhydrylase; seattle structural genomics center for infectious disease, S mycobacterium, PLP, schiff base; HET: LLP; 1.85A {Mycobacterium tuberculosis}
Probab=24.53 E-value=1.7e+02 Score=26.42 Aligned_cols=56 Identities=14% Similarity=0.080 Sum_probs=31.1
Q ss_pred CCCCCeEEEEcCCcHhHHHHH-HHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEc
Q 014951 6 VNPGDRCGIYGSNCPEWIIAM-EACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQ 63 (415)
Q Consensus 6 v~~gd~V~l~~~n~~~~~~~~-lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~ii~~ 63 (415)
+++||.|.+..+....+...+ ..+...|+.++.++.. ..+.+...++. +.++|+..
T Consensus 117 ~~~Gd~Vi~~~~~y~~~~~~~~~~~~~~g~~~~~v~~~-d~~~l~~ai~~-~t~~v~le 173 (414)
T 3ndn_A 117 LGAGDRLVAARSLFGSCFVVCSEILPRWGVQTVFVDGD-DLSQWERALSV-PTQAVFFE 173 (414)
T ss_dssp CCTTCEEEEESCCCHHHHHHHHTHHHHTTCEEEEECTT-CHHHHHHHTSS-CCSEEEEE
T ss_pred hCCCCEEEEcCCccchHHHHHHHHHHHcCcEEEEeCCC-CHHHHHHhcCC-CCeEEEEE
Confidence 467787776665544433222 1234467776666554 55666665543 45666654
No 163
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=24.46 E-value=1.2e+02 Score=26.32 Aligned_cols=54 Identities=19% Similarity=0.318 Sum_probs=38.1
Q ss_pred CCCCCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEE
Q 014951 4 RGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAF 61 (415)
Q Consensus 4 ~Gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~ii 61 (415)
.++++|++|+|....++-..++.+|. ..|+.++.+.. +.+.+. .++...++.++
T Consensus 160 ~~~~~g~~VlV~GaG~vG~~~~~~a~-~~Ga~Vi~~~~--~~~~~~-~~~~lGa~~~~ 213 (339)
T 1rjw_A 160 TGAKPGEWVAIYGIGGLGHVAVQYAK-AMGLNVVAVDI--GDEKLE-LAKELGADLVV 213 (339)
T ss_dssp HTCCTTCEEEEECCSTTHHHHHHHHH-HTTCEEEEECS--CHHHHH-HHHHTTCSEEE
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHH-HcCCEEEEEeC--CHHHHH-HHHHCCCCEEe
Confidence 47899999999999778888888776 46887776654 344444 34556666554
No 164
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=24.45 E-value=1.4e+02 Score=26.40 Aligned_cols=56 Identities=13% Similarity=0.195 Sum_probs=38.4
Q ss_pred cCCCCCCCeEEEEcCCcHhHHHHHHHHHHcCC-EEEecCCCCCHHHHHHHHHhcCceEEEE
Q 014951 3 SRGVNPGDRCGIYGSNCPEWIIAMEACNSQAI-TYVPLYDTLGANAVEFIINHAEVSIAFV 62 (415)
Q Consensus 3 ~~Gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~-~~~~l~~~~~~~~l~~~l~~~~~~~ii~ 62 (415)
..++++|++|+|...-.+-.+++++|-. .|+ .++.++. +++.+. +++..+++.++.
T Consensus 187 ~~~~~~g~~VlV~GaG~vG~~a~qla~~-~Ga~~Vi~~~~--~~~~~~-~~~~lGa~~vi~ 243 (374)
T 1cdo_A 187 TAKVEPGSTCAVFGLGAVGLAAVMGCHS-AGAKRIIAVDL--NPDKFE-KAKVFGATDFVN 243 (374)
T ss_dssp TTCCCTTCEEEEECCSHHHHHHHHHHHH-TTCSEEEEECS--CGGGHH-HHHHTTCCEEEC
T ss_pred ccCCCCCCEEEEECCCHHHHHHHHHHHH-cCCCEEEEEcC--CHHHHH-HHHHhCCceEEe
Confidence 4689999999999876678888887765 687 5665654 333333 345667776663
No 165
>3rq1_A Aminotransferase class I and II; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta structure, cytosol; HET: AKG GOL; 2.20A {Veillonella parvula}
Probab=23.87 E-value=2.1e+02 Score=25.53 Aligned_cols=55 Identities=15% Similarity=0.192 Sum_probs=37.5
Q ss_pred CCCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCC-----CCCHHHHHHHHHhc---Cce-EEEEc
Q 014951 6 VNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYD-----TLGANAVEFIINHA---EVS-IAFVQ 63 (415)
Q Consensus 6 v~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~-----~~~~~~l~~~l~~~---~~~-~ii~~ 63 (415)
+++||.|.+..|.-..+. .++...|+.++.++. .++.+.+...++.. +.+ +++..
T Consensus 123 ~~~gd~Vl~~~p~~~~~~---~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~~~~~~~~~~vi~~ 186 (418)
T 3rq1_A 123 TEPGDEVLTADWYWGAYR---VICSDTGRTLVTYSLFDEHNNFNHEAFQNRVNELAAKQTNVVVIFN 186 (418)
T ss_dssp SCTTCEEEEESSCCTHHH---HHHHHTTCEEEEECSBCTTSSBCHHHHHHHHHHHHHHCSEEEEEEE
T ss_pred cCCCCEEEECCCCchhHH---HHHHHcCCEEEEEeeeCCCCCcCHHHHHHHHHHhhccCCCEEEEEe
Confidence 478999998887665554 345678887776653 45678888888763 554 45543
No 166
>1rvg_A Fructose-1,6-bisphosphate aldolase; class II aldolase, metal-depdendent aldolase, lyase; 2.00A {Thermus aquaticus} SCOP: c.1.10.2 PDB: 1rv8_A 2fjk_A*
Probab=23.84 E-value=71 Score=27.62 Aligned_cols=81 Identities=15% Similarity=0.191 Sum_probs=56.0
Q ss_pred CHHHHHHHHHhhCCeEEEeCc-HHHHHHHHHHHHhhhcCChhhHHHHHHHHHhhhhccccCCCCCC-ccchhhHHHHHHH
Q 014951 207 DVRYLMEDIQELKPTMFSGVP-RVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMKKGMPQNK-AAPLLDSLVFSKI 284 (415)
Q Consensus 207 ~~~~~~~~i~~~~~t~~~~~P-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 284 (415)
+|++..+.+++.+|+.+...= +.. -.+.. ..+.++-..++.+
T Consensus 154 ~Peea~~Fv~~TgvD~LAvaiGt~H------------------------------------G~Yk~~g~p~L~~~~L~~I 197 (305)
T 1rvg_A 154 NPEEARIFMERTGADYLAVAIGTSH------------------------------------GAYKGKGRPFIDHARLERI 197 (305)
T ss_dssp CHHHHHHHHHHHCCSEEEECSSCCS------------------------------------SSBCSSSSCCCCHHHHHHH
T ss_pred CHHHHHHHHHHHCCCEEEEecCccc------------------------------------cccCCCCCCccCHHHHHHH
Confidence 889999999998888765421 110 00110 1344555556666
Q ss_pred HHHhCCceeEEEEecCCCCHHHHHHHHHhcCCceEEeeccCC
Q 014951 285 REAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQGYGLTE 326 (415)
Q Consensus 285 ~~~~~~~lr~v~~~G~~~~~~~~~~~~~~~~~~~~~~yG~tE 326 (415)
+... .+-.++-||+.++++..+.+.+ +|-.+-+.||.++
T Consensus 198 ~~~~--~vpLVlHGgSsv~~~~~~~~~~-~gg~~~~~~G~p~ 236 (305)
T 1rvg_A 198 ARLV--PAPLVLHGASAVPPELVERFRA-SGGEIGEAAGIHP 236 (305)
T ss_dssp HHHC--CSCEEECSCCCCCHHHHHHHHH-TTCCCCSCBCCCH
T ss_pred HHhc--CCCEEEeCCCCCcHHHHHHHHh-hccccccCCCCCH
Confidence 6655 3788999999999999999986 6888888888775
No 167
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=23.27 E-value=2.2e+02 Score=24.81 Aligned_cols=58 Identities=14% Similarity=0.134 Sum_probs=40.9
Q ss_pred cCCCC------CCCeEEEE-cCCcHhHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEcC
Q 014951 3 SRGVN------PGDRCGIY-GSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQE 64 (415)
Q Consensus 3 ~~Gv~------~gd~V~l~-~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~ii~~~ 64 (415)
..+++ +|++|+|. ..-.+-.+++.+|. ..|+.++.+.. +++.+. +++...++.++...
T Consensus 139 ~~~~~~~~~~~~g~~VlV~gg~G~vG~~a~qla~-~~Ga~Vi~~~~--~~~~~~-~~~~lGa~~vi~~~ 203 (346)
T 3fbg_A 139 VFGISRNRNENEGKTLLIINGAGGVGSIATQIAK-AYGLRVITTAS--RNETIE-WTKKMGADIVLNHK 203 (346)
T ss_dssp TSCCCSSHHHHTTCEEEEESTTSHHHHHHHHHHH-HTTCEEEEECC--SHHHHH-HHHHHTCSEEECTT
T ss_pred hcCCccccccCCCCEEEEEcCCCHHHHHHHHHHH-HcCCEEEEEeC--CHHHHH-HHHhcCCcEEEECC
Confidence 34677 99999999 56668888888776 67888777764 344443 45567788777544
No 168
>3pc3_A CG1753, isoform A; CBS, synthase, PLP, heme, aminoacrylate, lyase; HET: HEM P1T; 1.55A {Drosophila melanogaster} PDB: 3pc2_A* 3pc4_A*
Probab=23.24 E-value=1.8e+02 Score=27.40 Aligned_cols=58 Identities=12% Similarity=0.008 Sum_probs=43.6
Q ss_pred CCCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEcC
Q 014951 6 VNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQE 64 (415)
Q Consensus 6 v~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~ii~~~ 64 (415)
+++|++|... ..+-.-..+.++|...|..+..+-|...+..-...++..+++++++..
T Consensus 110 ~~~g~~vv~~-ssGN~g~a~A~~a~~~G~~~~iv~p~~~~~~k~~~~~~~GA~v~~~~~ 167 (527)
T 3pc3_A 110 LKPGYTIIEP-TSGNTGIGLAMACAVKGYKCIIVMPEKMSNEKVSALRTLGAKIIRTPT 167 (527)
T ss_dssp CCTTCEEEEE-CSSHHHHHHHHHHHHHTCEEEEEEETTSCHHHHHHHHHTTCEEEEECT
T ss_pred CCCCCEEEEe-CCCHHHHHHHHHHHHhCCeEEEEEcCCCCHHHHHHHHHCCCEEEEeCC
Confidence 4778877654 445555666778888899888776666666677888999999999875
No 169
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=23.01 E-value=2.2e+02 Score=24.76 Aligned_cols=53 Identities=11% Similarity=0.076 Sum_probs=38.4
Q ss_pred ccCCCCCCCeEEEEc-CCcHhHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceE
Q 014951 2 RSRGVNPGDRCGIYG-SNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSI 59 (415)
Q Consensus 2 ~~~Gv~~gd~V~l~~-~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~ 59 (415)
...++++|++|+|.. .-.+-.+++.+|. ..|+.++.+ .+.+.+. .++...+..
T Consensus 144 ~~~~~~~g~~VlV~Ga~g~iG~~~~q~a~-~~Ga~Vi~~---~~~~~~~-~~~~lGa~~ 197 (343)
T 3gaz_A 144 DRAQVQDGQTVLIQGGGGGVGHVAIQIAL-ARGARVFAT---ARGSDLE-YVRDLGATP 197 (343)
T ss_dssp TTTCCCTTCEEEEETTTSHHHHHHHHHHH-HTTCEEEEE---ECHHHHH-HHHHHTSEE
T ss_pred HhcCCCCCCEEEEecCCCHHHHHHHHHHH-HCCCEEEEE---eCHHHHH-HHHHcCCCE
Confidence 456899999999999 5667777777776 568877766 2455554 456677777
No 170
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=22.95 E-value=1.6e+02 Score=25.61 Aligned_cols=60 Identities=8% Similarity=-0.067 Sum_probs=40.1
Q ss_pred cCCCCCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEcCC
Q 014951 3 SRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQEN 65 (415)
Q Consensus 3 ~~Gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~ii~~~~ 65 (415)
..++++|++|+|...-+.-.+++++|...-..+++.++. +++. ..++++.++..+|...+
T Consensus 155 ~~~~~~g~~VlV~GaG~vG~~aiq~ak~~G~~~vi~~~~--~~~k-~~~a~~lGa~~~i~~~~ 214 (346)
T 4a2c_A 155 LAQGCENKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDI--SSEK-LALAKSFGAMQTFNSSE 214 (346)
T ss_dssp HTTCCTTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEES--CHHH-HHHHHHTTCSEEEETTT
T ss_pred HhccCCCCEEEEECCCCcchHHHHHHHHcCCcEEEEEec--hHHH-HHHHHHcCCeEEEeCCC
Confidence 457899999999988777777777776543344455543 3343 34567788887775543
No 171
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=22.89 E-value=1.2e+02 Score=27.21 Aligned_cols=52 Identities=19% Similarity=0.174 Sum_probs=37.1
Q ss_pred cCCCCCCCeEEEEcCCcHhHHHHHHHHHHcCC-EEEecCCCCCHHHHHHHHHhcCce
Q 014951 3 SRGVNPGDRCGIYGSNCPEWIIAMEACNSQAI-TYVPLYDTLGANAVEFIINHAEVS 58 (415)
Q Consensus 3 ~~Gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~-~~~~l~~~~~~~~l~~~l~~~~~~ 58 (415)
..++++|++|+|...-.+-.+++++|-. .|+ .++.++. +.+.+. +++..++.
T Consensus 180 ~~~~~~g~~VlV~GaG~vG~~aiqlak~-~Ga~~Vi~~~~--~~~~~~-~a~~lGa~ 232 (398)
T 2dph_A 180 SAGVKPGSHVYIAGAGPVGRCAAAGARL-LGAACVIVGDQ--NPERLK-LLSDAGFE 232 (398)
T ss_dssp HTTCCTTCEEEEECCSHHHHHHHHHHHH-HTCSEEEEEES--CHHHHH-HHHTTTCE
T ss_pred HcCCCCCCEEEEECCCHHHHHHHHHHHH-cCCCEEEEEcC--CHHHHH-HHHHcCCc
Confidence 4579999999999976678888888765 587 6666654 344443 45667775
No 172
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=22.60 E-value=1.8e+02 Score=25.33 Aligned_cols=57 Identities=14% Similarity=0.061 Sum_probs=39.1
Q ss_pred cCCCCCCCeEEEEcCC-cHhHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEE
Q 014951 3 SRGVNPGDRCGIYGSN-CPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFV 62 (415)
Q Consensus 3 ~~Gv~~gd~V~l~~~n-~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~ii~ 62 (415)
+.++++|++|+|.... .+-..++.+|....|+.++.++. +.+.+.. ++...++.++.
T Consensus 165 ~~~~~~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~--~~~~~~~-~~~~g~~~~~~ 222 (347)
T 1jvb_A 165 KASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDV--REEAVEA-AKRAGADYVIN 222 (347)
T ss_dssp HTTCCTTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEES--SHHHHHH-HHHHTCSEEEE
T ss_pred hcCCCCCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcC--CHHHHHH-HHHhCCCEEec
Confidence 4678999999999998 68888888777654887766654 3444433 34556665553
No 173
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=22.36 E-value=2e+02 Score=25.15 Aligned_cols=57 Identities=11% Similarity=0.007 Sum_probs=39.2
Q ss_pred ccCCCCCCCeEEEEc-CCcHhHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEE
Q 014951 2 RSRGVNPGDRCGIYG-SNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFV 62 (415)
Q Consensus 2 ~~~Gv~~gd~V~l~~-~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~ii~ 62 (415)
+..++++|++|+|.. .-.+-..++.+|. ..|+.++.+.. +++.+. .++...++.++.
T Consensus 161 ~~~~~~~g~~VlV~Gg~g~iG~~~~~~a~-~~Ga~Vi~~~~--~~~~~~-~~~~lGa~~~~~ 218 (353)
T 4dup_A 161 QMAGLTEGESVLIHGGTSGIGTTAIQLAR-AFGAEVYATAG--STGKCE-ACERLGAKRGIN 218 (353)
T ss_dssp TTTCCCTTCEEEESSTTSHHHHHHHHHHH-HTTCEEEEEES--SHHHHH-HHHHHTCSEEEE
T ss_pred HhcCCCCCCEEEEEcCCCHHHHHHHHHHH-HcCCEEEEEeC--CHHHHH-HHHhcCCCEEEe
Confidence 346899999999994 5567777777775 66888776654 444443 445567776664
No 174
>1ni5_A Putative cell cycle protein MESJ; structural genomics, ATPase, PP-type, putative cell cycle PR PSI, protein structure initiative; 2.65A {Escherichia coli} SCOP: b.153.1.2 c.26.2.5 d.229.1.1
Probab=22.01 E-value=2.6e+02 Score=25.47 Aligned_cols=60 Identities=8% Similarity=0.030 Sum_probs=43.4
Q ss_pred CCCCCeEEEEcCCcHhHHHHHHHHHH-----cC--CEEEecCCCCCH------HHHHHHHHhcCceEEEEcCC
Q 014951 6 VNPGDRCGIYGSNCPEWIIAMEACNS-----QA--ITYVPLYDTLGA------NAVEFIINHAEVSIAFVQEN 65 (415)
Q Consensus 6 v~~gd~V~l~~~n~~~~~~~~lA~~~-----~G--~~~~~l~~~~~~------~~l~~~l~~~~~~~ii~~~~ 65 (415)
+++|++|+|.+.-+++..++...+.. .| ..++.++..+.. +.+..+.+..+..+.+.+-+
T Consensus 10 l~~~~~vlVa~SGG~DS~~Ll~ll~~~~~~~~g~~v~avhvdhglr~~s~~~~~~v~~~~~~lgi~~~v~~~~ 82 (433)
T 1ni5_A 10 LLTSRQILVAFSGGLDSTVLLHQLVQWRTENPGVALRAIHVHHGLSANADAWVTHCENVCQQWQVPLVVERVQ 82 (433)
T ss_dssp HTTCSEEEEECCSBHHHHHHHHHHHHHHTTSTTCEEEEEEECCSCCSSHHHHHHHHHHHHHHTTCCEEEECCC
T ss_pred cCCCCEEEEEEcchHHHHHHHHHHHHHHHhcCCCeEEEEEEECCCCcccHHHHHHHHHHHHHcCCcEEEEEec
Confidence 57899999999999999988887776 45 455677776642 23556667777777776543
No 175
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=21.96 E-value=1.4e+02 Score=26.63 Aligned_cols=56 Identities=9% Similarity=0.027 Sum_probs=38.9
Q ss_pred cCC-CCCCCeEEEEcCCcHhHHHHHHHHHHcCC-EEEecCCCCCHHHHHHHHHhcCceEEEE
Q 014951 3 SRG-VNPGDRCGIYGSNCPEWIIAMEACNSQAI-TYVPLYDTLGANAVEFIINHAEVSIAFV 62 (415)
Q Consensus 3 ~~G-v~~gd~V~l~~~n~~~~~~~~lA~~~~G~-~~~~l~~~~~~~~l~~~l~~~~~~~ii~ 62 (415)
..+ +++|++|+|...-.+-.+++++|-. .|+ .++.+.. +.+.+ .+++..+++.++.
T Consensus 189 ~~~~~~~g~~VlV~GaG~vG~~aiqlak~-~Ga~~Vi~~~~--~~~~~-~~~~~lGa~~vi~ 246 (380)
T 1vj0_A 189 EYPESFAGKTVVIQGAGPLGLFGVVIARS-LGAENVIVIAG--SPNRL-KLAEEIGADLTLN 246 (380)
T ss_dssp TCSSCCBTCEEEEECCSHHHHHHHHHHHH-TTBSEEEEEES--CHHHH-HHHHHTTCSEEEE
T ss_pred hcCCCCCCCEEEEECcCHHHHHHHHHHHH-cCCceEEEEcC--CHHHH-HHHHHcCCcEEEe
Confidence 457 8999999999966678888887764 584 6666654 34444 3455777777664
No 176
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=21.90 E-value=1.7e+02 Score=25.74 Aligned_cols=56 Identities=9% Similarity=0.156 Sum_probs=38.2
Q ss_pred cCCCCCCCeEEEEcCCcHhHHHHHHHHHHcCC-EEEecCCCCCHHHHHHHHHhcCceEEEE
Q 014951 3 SRGVNPGDRCGIYGSNCPEWIIAMEACNSQAI-TYVPLYDTLGANAVEFIINHAEVSIAFV 62 (415)
Q Consensus 3 ~~Gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~-~~~~l~~~~~~~~l~~~l~~~~~~~ii~ 62 (415)
..++++|++|+|...-.+-.+++++|-. .|+ .++.++.+ ++.+. +++..+++.++.
T Consensus 185 ~~~~~~g~~VlV~GaG~vG~~avqla~~-~Ga~~Vi~~~~~--~~~~~-~~~~lGa~~vi~ 241 (373)
T 2fzw_A 185 TAKLEPGSVCAVFGLGGVGLAVIMGCKV-AGASRIIGVDIN--KDKFA-RAKEFGATECIN 241 (373)
T ss_dssp TTCCCTTCEEEEECCSHHHHHHHHHHHH-HTCSEEEEECSC--GGGHH-HHHHHTCSEEEC
T ss_pred hcCCCCCCEEEEECCCHHHHHHHHHHHH-cCCCeEEEEcCC--HHHHH-HHHHcCCceEec
Confidence 4689999999999976678888888765 577 56666542 33332 344567766653
No 177
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=21.73 E-value=3.2e+02 Score=23.48 Aligned_cols=56 Identities=9% Similarity=0.064 Sum_probs=40.8
Q ss_pred CCCCCCCeEEEEc-CCcHhHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEc
Q 014951 4 RGVNPGDRCGIYG-SNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQ 63 (415)
Q Consensus 4 ~Gv~~gd~V~l~~-~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~ii~~ 63 (415)
.++++|++|+|.. .-.+-..++.+|. ..|+.++.+.. +.+.+. .++...++.++..
T Consensus 144 ~~~~~g~~vlV~Ga~g~iG~~~~~~a~-~~Ga~Vi~~~~--~~~~~~-~~~~~ga~~~~~~ 200 (334)
T 3qwb_A 144 YHVKKGDYVLLFAAAGGVGLILNQLLK-MKGAHTIAVAS--TDEKLK-IAKEYGAEYLINA 200 (334)
T ss_dssp SCCCTTCEEEESSTTBHHHHHHHHHHH-HTTCEEEEEES--SHHHHH-HHHHTTCSEEEET
T ss_pred ccCCCCCEEEEECCCCHHHHHHHHHHH-HCCCEEEEEeC--CHHHHH-HHHHcCCcEEEeC
Confidence 4799999999999 5567777777765 57888777764 455555 5666777776654
No 178
>1y7l_A O-acetylserine sulfhydrylase, O-acetylserine (thiol)-lyase; X-RAY crystallography, sulfhydrylase; HET: LLP; 1.55A {Haemophilus influenzae} SCOP: c.79.1.1 PDB: 3iqg_X* 3iqh_X* 3iqi_X* 1fcj_A* 1oas_A* 1d6s_A*
Probab=21.64 E-value=1.7e+02 Score=25.19 Aligned_cols=58 Identities=5% Similarity=-0.081 Sum_probs=41.0
Q ss_pred CCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEcCC
Q 014951 7 NPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQEN 65 (415)
Q Consensus 7 ~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~ii~~~~ 65 (415)
++|+.|...+ .+-.-..+.++|.+.|..+..+-|...+..-...++..++++++++..
T Consensus 60 ~~~~~vv~~s-sGN~g~a~A~~a~~~G~~~~iv~p~~~~~~k~~~~~~~GA~v~~~~~~ 117 (316)
T 1y7l_A 60 TKGKEIVDAT-SGNTGIALAYVAAARGYKITLTMPETMSLERKRLLCGLGVNLVLTEGA 117 (316)
T ss_dssp CTTCEEEESC-CSHHHHHHHHHHHHHTCCEEEEEETTSCHHHHHHHHHTTCEEEEECGG
T ss_pred CCCCEEEEeC-CcHHHHHHHHHHHHcCCcEEEEECCCCCHHHHHHHHHcCCEEEEeCCC
Confidence 5666665554 455556666777899987776655545556667888999999998764
No 179
>1t3i_A Probable cysteine desulfurase; PLP-binding enzyme, transferase; HET: 2OS PLP; 1.80A {Synechocystis SP} SCOP: c.67.1.3
Probab=21.63 E-value=1.3e+02 Score=26.72 Aligned_cols=58 Identities=5% Similarity=0.036 Sum_probs=33.8
Q ss_pred CCCCCeEEEEcCCcHhHHHHHH-HHHHcCCEEEecCC--C--CCHHHHHHHHHhcCceEEEEcC
Q 014951 6 VNPGDRCGIYGSNCPEWIIAME-ACNSQAITYVPLYD--T--LGANAVEFIINHAEVSIAFVQE 64 (415)
Q Consensus 6 v~~gd~V~l~~~n~~~~~~~~l-A~~~~G~~~~~l~~--~--~~~~~l~~~l~~~~~~~ii~~~ 64 (415)
+++||.|.+..+........+. ++...|+.++.++. . ...+++...++. ++++|+...
T Consensus 115 ~~~gd~Vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~-~~~~v~~~~ 177 (420)
T 1t3i_A 115 LKAGDEIITTVMEHHSNLVPWQMVAAKTGAVLKFVQLDEQESFDLEHFKTLLSE-KTKLVTVVH 177 (420)
T ss_dssp CCTTCEEEEETTCCGGGTHHHHHHHHHHCCEEEEECBCTTSSBCHHHHHHHCCT-TEEEEEEES
T ss_pred cCCCCEEEECcchhHHHHHHHHHHHHhcCcEEEEeccCCCCCcCHHHHHHhhCC-CceEEEEeC
Confidence 6788888887776665433222 23345766655543 2 456777766643 566666543
No 180
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=21.39 E-value=2e+02 Score=25.04 Aligned_cols=56 Identities=13% Similarity=0.127 Sum_probs=38.5
Q ss_pred cCCCCCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEE
Q 014951 3 SRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFV 62 (415)
Q Consensus 3 ~~Gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~ii~ 62 (415)
..++++|++|+|...-.+-..++.+|- ..|+.++.++. +++.+ .+++...++.++.
T Consensus 163 ~~~~~~g~~VlV~GaG~vG~~a~qla~-~~Ga~Vi~~~~--~~~~~-~~~~~lGa~~~~~ 218 (352)
T 1e3j_A 163 RAGVQLGTTVLVIGAGPIGLVSVLAAK-AYGAFVVCTAR--SPRRL-EVAKNCGADVTLV 218 (352)
T ss_dssp HHTCCTTCEEEEECCSHHHHHHHHHHH-HTTCEEEEEES--CHHHH-HHHHHTTCSEEEE
T ss_pred hcCCCCCCEEEEECCCHHHHHHHHHHH-HcCCEEEEEcC--CHHHH-HHHHHhCCCEEEc
Confidence 347899999999997667888888776 46887555543 34444 3456677776654
No 181
>1ve1_A O-acetylserine sulfhydrylase; PLP, transferase, riken structural genomics/proteomics initi RSGI, structural genomics; HET: PLP; 1.45A {Thermus thermophilus} SCOP: c.79.1.1 PDB: 2eco_A* 2ecq_A* 2efy_A*
Probab=21.34 E-value=2.6e+02 Score=23.87 Aligned_cols=59 Identities=7% Similarity=0.009 Sum_probs=41.1
Q ss_pred CCCCC--eEEEEcCCcHhHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEcCC
Q 014951 6 VNPGD--RCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQEN 65 (415)
Q Consensus 6 v~~gd--~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~ii~~~~ 65 (415)
+++|+ .|.. ...+-.-..+.++|.+.|..+..+-|...+..-...++..++++++++..
T Consensus 57 ~~~g~~~~vv~-assGN~g~a~A~~a~~~G~~~~i~~p~~~~~~k~~~~~~~Ga~V~~~~~~ 117 (304)
T 1ve1_A 57 LRPGSGQVIVE-PTSGNTGIGLAMIAASRGYRLILTMPAQMSEERKRVLKAFGAELVLTDPE 117 (304)
T ss_dssp CCTTSCCEEEE-SCCSHHHHHHHHHHHHHTCEEEEEEETTCCHHHHHHHHHTTCEEEEECTT
T ss_pred CCCCCccEEEE-eCCcHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHcCCEEEEECCC
Confidence 45666 4444 44455555666778899988877655545556667788999999998865
No 182
>2cb1_A O-acetyl homoserine sulfhydrylase; PLP enzyme, lyase, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: LLP; 2.0A {Thermus thermophilus}
Probab=21.33 E-value=1.6e+02 Score=26.47 Aligned_cols=55 Identities=16% Similarity=0.114 Sum_probs=33.7
Q ss_pred CCCCCeEEEEcCCcHhHHHHHHH-HHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEc
Q 014951 6 VNPGDRCGIYGSNCPEWIIAMEA-CNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQ 63 (415)
Q Consensus 6 v~~gd~V~l~~~n~~~~~~~~lA-~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~ii~~ 63 (415)
+++||.|.+..+.....+..+.. +...|+.+..++.. .+.++..++. +.++|+..
T Consensus 92 ~~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~l~~~i~~-~~~~v~~~ 147 (412)
T 2cb1_A 92 LRPGDEVVAAKGLFGQTIGLFGQVLSLMGVTVRYVDPE--PEAVREALSA-KTRAVFVE 147 (412)
T ss_dssp CCTTCEEEEETTCCHHHHHHHHHTTTTTTCEEEEECSS--HHHHHHHCCT-TEEEEEEE
T ss_pred hCCCCEEEEeCCCchhHHHHHHHHHHHcCCEEEEECCC--HHHHHHHhcc-CCeEEEEe
Confidence 46888888877765544333322 44568777777653 6666666643 56666664
No 183
>3op7_A Aminotransferase class I and II; PLP-dependent transferase, structural genomics, joint center structural genomics, JCSG; HET: LLP UNL; 1.70A {Streptococcus suis 89} PDB: 3p6k_A*
Probab=21.05 E-value=1.1e+02 Score=26.87 Aligned_cols=54 Identities=9% Similarity=0.054 Sum_probs=32.5
Q ss_pred CCCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCCC------CCHHHHHHHHHhcCceEEEEc
Q 014951 6 VNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDT------LGANAVEFIINHAEVSIAFVQ 63 (415)
Q Consensus 6 v~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~~------~~~~~l~~~l~~~~~~~ii~~ 63 (415)
+++||.|.+..+....+. -++...|+.++.++.. .+.+.++..++. ++++|+..
T Consensus 102 ~~~gd~Vl~~~~~~~~~~---~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~-~~~~v~~~ 161 (375)
T 3op7_A 102 IEPGDHVISLYPTYQQLY---DIPKSLGAEVDLWQIEEENGWLPDLEKLRQLIRP-TTKMICIN 161 (375)
T ss_dssp CCTTCEEEEEESSCTHHH---HHHHHTTCEEEEEEEEGGGTTEECHHHHHHHCCT-TCCEEEEE
T ss_pred cCCCCEEEEeCCCchhHH---HHHHHcCCEEEEEeccccCCCCCCHHHHHHhhcc-CCeEEEEc
Confidence 467888887777655543 2355667766555422 366777766643 56666654
No 184
>1qgn_A Protein (cystathionine gamma-synthase); methionine biosynthesis, pyridoxal 5'-phosphate, gamma-famil; HET: PLP; 2.90A {Nicotiana tabacum} SCOP: c.67.1.3 PDB: 1i41_A* 1i48_A* 1i43_A*
Probab=21.00 E-value=2.7e+02 Score=25.37 Aligned_cols=58 Identities=19% Similarity=0.193 Sum_probs=34.2
Q ss_pred CCCCCeEEEEcCCcHhHHHHHH-HHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEcC
Q 014951 6 VNPGDRCGIYGSNCPEWIIAME-ACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQE 64 (415)
Q Consensus 6 v~~gd~V~l~~~n~~~~~~~~l-A~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~ii~~~ 64 (415)
+++||.|.+..+......-.+- .+...|+.+..++.. ..++++..++.-.+++|+...
T Consensus 150 ~~~Gd~Vi~~~~~y~~~~~~~~~~~~~~G~~v~~v~~~-d~~~l~~ai~~~tv~lV~le~ 208 (445)
T 1qgn_A 150 VPAGGHIVTTTDCYRKTRIFIETILPKMGITATVIDPA-DVGALELALNQKKVNLFFTES 208 (445)
T ss_dssp SCSSCEEEEETTSCHHHHHHHHHTGGGGTCEEEEECSS-CHHHHHHHHHHSCEEEEEEES
T ss_pred hCCCCEEEEcCCCchhHHHHHHHHHHHcCCEEEEeCCC-CHHHHHHHhccCCCCEEEEeC
Confidence 4678887776654443322211 345668777777654 677777777653336666543
No 185
>2cvh_A DNA repair and recombination protein RADB; filament formation, homologous recombination, ATPase domain, hyperthermophIle; HET: DNA; 2.20A {Thermococcus kodakarensis} PDB: 2cvf_A*
Probab=21.00 E-value=2.3e+02 Score=22.27 Aligned_cols=49 Identities=10% Similarity=0.091 Sum_probs=33.9
Q ss_pred CCCCCCeEEEEcCCc--HhHHHHHHHHHHcCCEEEecCCCC--CHHHHHHHHHh
Q 014951 5 GVNPGDRCGIYGSNC--PEWIIAMEACNSQAITYVPLYDTL--GANAVEFIINH 54 (415)
Q Consensus 5 Gv~~gd~V~l~~~n~--~~~~~~~lA~~~~G~~~~~l~~~~--~~~~l~~~l~~ 54 (415)
|+.+|+.+++..+++ -..++..+|. ..|..++.++... +.+.+..+++.
T Consensus 16 gi~~G~~~~i~G~~GsGKTtl~~~l~~-~~~~~v~~i~~~~~~~~~~~~~~~~~ 68 (220)
T 2cvh_A 16 GFAPGVLTQVYGPYASGKTTLALQTGL-LSGKKVAYVDTEGGFSPERLVQMAET 68 (220)
T ss_dssp SBCTTSEEEEECSTTSSHHHHHHHHHH-HHCSEEEEEESSCCCCHHHHHHHHHT
T ss_pred CCcCCEEEEEECCCCCCHHHHHHHHHH-HcCCcEEEEECCCCCCHHHHHHHHHh
Confidence 799999999999997 3555555555 6666666565443 77777665543
No 186
>3nra_A Aspartate aminotransferase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: LLP; 2.15A {Rhodobacter sphaeroides}
Probab=20.94 E-value=2.4e+02 Score=24.86 Aligned_cols=54 Identities=15% Similarity=0.097 Sum_probs=36.2
Q ss_pred CCCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCC----------CCCHHHHHHHHHhcCceEEEEc
Q 014951 6 VNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYD----------TLGANAVEFIINHAEVSIAFVQ 63 (415)
Q Consensus 6 v~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~----------~~~~~~l~~~l~~~~~~~ii~~ 63 (415)
+++||.|.+..+....+. -++...|+.++.++. ....+.+...++. ++++++..
T Consensus 123 ~~~gd~vl~~~~~~~~~~---~~~~~~g~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~-~~~~v~~~ 186 (407)
T 3nra_A 123 VARGDKVAIVQPDYFANR---KLVEFFEGEMVPVQLDYVSADETRAGLDLTGLEEAFKA-GARVFLFS 186 (407)
T ss_dssp CCTTCEEEEEESCCTHHH---HHHHHTTCEEEEEEBCCCSSCCSSCCBCHHHHHHHHHT-TCCEEEEE
T ss_pred CCCCCEEEEcCCcccchH---HHHHHcCCEEEEeecccccccCcCCCcCHHHHHHHHhh-CCcEEEEc
Confidence 478999988777665443 455667877665543 1467888888876 66666543
No 187
>1cs1_A CGS, protein (cystathionine gamma-synthase); lyase, LLP-dependent enzymes, methionine biosynthesis; HET: LLP DHD; 1.50A {Escherichia coli} SCOP: c.67.1.3
Probab=20.79 E-value=3.1e+02 Score=24.01 Aligned_cols=57 Identities=9% Similarity=0.051 Sum_probs=36.0
Q ss_pred CCCCCeEEEEcCCcHhHHHHH-HHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEcC
Q 014951 6 VNPGDRCGIYGSNCPEWIIAM-EACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQE 64 (415)
Q Consensus 6 v~~gd~V~l~~~n~~~~~~~~-lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~ii~~~ 64 (415)
+++||.|.+..+.....+-.+ ..+...|+.+..++.. +.+.+...++. ++++|+...
T Consensus 88 ~~~g~~vl~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~-d~~~l~~~i~~-~~~~v~~~~ 145 (386)
T 1cs1_A 88 LKPGDLLVAPHDCYGGSYRLFDSLAKRGCYRVLFVDQG-DEQALRAALAE-KPKLVLVES 145 (386)
T ss_dssp CCTTCEEEEETTCCHHHHHHHHHHHTTTSCEEEEECTT-CHHHHHHHHHT-CCSEEEEEC
T ss_pred hCCCCEEEEecCCcHhHHHHHHHHHHhcCCEEEEeCCC-CHHHHHHhhcc-CCcEEEEeC
Confidence 467888888877665544333 2235567777766543 67778777764 566666553
No 188
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=20.64 E-value=2.5e+02 Score=25.69 Aligned_cols=56 Identities=14% Similarity=0.125 Sum_probs=40.6
Q ss_pred CCCCCCCeEEEEcC-CcHhHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEc
Q 014951 4 RGVNPGDRCGIYGS-NCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQ 63 (415)
Q Consensus 4 ~Gv~~gd~V~l~~~-n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~ii~~ 63 (415)
.++++|++|+|... -.+-.+++++|. ..|+.++.+.. +++.+. +++..++..++..
T Consensus 224 ~~~~~g~~VlV~GasG~vG~~avqlak-~~Ga~vi~~~~--~~~~~~-~~~~lGa~~vi~~ 280 (456)
T 3krt_A 224 AGMKQGDNVLIWGASGGLGSYATQFAL-AGGANPICVVS--SPQKAE-ICRAMGAEAIIDR 280 (456)
T ss_dssp TCCCTTCEEEETTTTSHHHHHHHHHHH-HTTCEEEEEES--SHHHHH-HHHHHTCCEEEET
T ss_pred cCCCCCCEEEEECCCCHHHHHHHHHHH-HcCCeEEEEEC--CHHHHH-HHHhhCCcEEEec
Confidence 68999999999998 557777777775 56887776653 555554 4577788777643
No 189
>3ecd_A Serine hydroxymethyltransferase 2; ssgcid, decode, bupsa00008A, one-carbon metabolism, pyridoxa phosphate, structural genomics; 1.60A {Burkholderia pseudomallei}
Probab=20.64 E-value=1.7e+02 Score=26.08 Aligned_cols=59 Identities=14% Similarity=0.071 Sum_probs=31.4
Q ss_pred CCCCCeEEEEcCCcHhHH--HHHHHHHHcCCEEEec--C---CCCCHHHHHHHHHhcCceEEEEcC
Q 014951 6 VNPGDRCGIYGSNCPEWI--IAMEACNSQAITYVPL--Y---DTLGANAVEFIINHAEVSIAFVQE 64 (415)
Q Consensus 6 v~~gd~V~l~~~n~~~~~--~~~lA~~~~G~~~~~l--~---~~~~~~~l~~~l~~~~~~~ii~~~ 64 (415)
+++||.|.+..+.....+ .........+...+++ + ...+.+.+...++..++++|+...
T Consensus 115 ~~~gd~Vi~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~v~~~~ 180 (425)
T 3ecd_A 115 AKPGDTVLGMSLDAGGHLTHGAKPALSGKWFNALQYGVSRDTMLIDYDQVEALAQQHKPSLIIAGF 180 (425)
T ss_dssp CCTTCEEEEECC------------------CEEEEECCCTTTSSCCHHHHHHHHHHHCCSEEEEEC
T ss_pred cCCCCEEEEcccccccceecchhhhhcccceeeeecCCCcccCccCHHHHHHHHhhcCCcEEEEcc
Confidence 578999988877554311 1111122233344444 3 245788999998877888888763
No 190
>2bwn_A 5-aminolevulinate synthase; tetrapyrrole biosynthesis, heme biosynthesis, pyridoxal PHOS dependent, transferase, acyltransferase; HET: LLP; 2.1A {Rhodobacter capsulatus} SCOP: c.67.1.4 PDB: 2bwo_A* 2bwp_A*
Probab=20.59 E-value=3e+02 Score=24.23 Aligned_cols=54 Identities=13% Similarity=-0.005 Sum_probs=32.7
Q ss_pred CCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhc---CceEEEEcC
Q 014951 7 NPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHA---EVSIAFVQE 64 (415)
Q Consensus 7 ~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~---~~~~ii~~~ 64 (415)
++||.|.+..+....+. .++...|+.++.++.. ..+.++..++.. ++++++...
T Consensus 130 ~~gd~Vl~~~~~~~~~~---~~~~~~g~~~~~v~~~-d~~~le~~l~~~~~~~~~~v~~~~ 186 (401)
T 2bwn_A 130 FPGLIIYSDSLNHASMI---EGIKRNAGPKRIFRHN-DVAHLRELIAADDPAAPKLIAFES 186 (401)
T ss_dssp STTCEEEEETTCCHHHH---HHHHHSCCCEEEECTT-CHHHHHHHHHHSCTTSCEEEEEES
T ss_pred CCCCEEEECchhhHHHH---HHHHHcCCeEEEEcCC-CHHHHHHHHHhhccCCceEEEEec
Confidence 47787777666554443 2345567776666544 567777777643 455655543
No 191
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=20.58 E-value=1.5e+02 Score=26.95 Aligned_cols=56 Identities=11% Similarity=0.016 Sum_probs=39.5
Q ss_pred cCCCCCCCeEEEEcC-CcHhHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEE
Q 014951 3 SRGVNPGDRCGIYGS-NCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFV 62 (415)
Q Consensus 3 ~~Gv~~gd~V~l~~~-n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~ii~ 62 (415)
..++++|++|+|... -.+-.+++.+|. ..|+.++.+.. +.+.+.. ++..++..++.
T Consensus 215 ~~~~~~g~~VlV~GasG~iG~~a~qla~-~~Ga~vi~~~~--~~~~~~~-~~~lGa~~~i~ 271 (447)
T 4a0s_A 215 GAQMKQGDIVLIWGASGGLGSYAIQFVK-NGGGIPVAVVS--SAQKEAA-VRALGCDLVIN 271 (447)
T ss_dssp TTCCCTTCEEEETTTTSHHHHHHHHHHH-HTTCEEEEEES--SHHHHHH-HHHTTCCCEEE
T ss_pred ccCCCCCCEEEEECCCCHHHHHHHHHHH-HcCCEEEEEeC--CHHHHHH-HHhcCCCEEEe
Confidence 368999999999997 567777777776 57887776653 4555544 46677766553
No 192
>3n0l_A Serine hydroxymethyltransferase; alpha beta class, 3-layer(ABA) sandwich, CSGI transferase, structural genomics; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=20.49 E-value=2e+02 Score=25.54 Aligned_cols=59 Identities=10% Similarity=0.029 Sum_probs=32.8
Q ss_pred CCCCCeEEEEcCCcHhHHHHH--HHHHHcCCEEEecCC----CCCHHHHHHHHHhcCceEEEEcC
Q 014951 6 VNPGDRCGIYGSNCPEWIIAM--EACNSQAITYVPLYD----TLGANAVEFIINHAEVSIAFVQE 64 (415)
Q Consensus 6 v~~gd~V~l~~~n~~~~~~~~--lA~~~~G~~~~~l~~----~~~~~~l~~~l~~~~~~~ii~~~ 64 (415)
+++||.|.+..+....+.... +.....+..+++++. ....+.+...++..++++|+...
T Consensus 108 ~~~gd~vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~v~~~~ 172 (417)
T 3n0l_A 108 INPGDKILGMDLSHGGHLTHGAKVSSSGKMYESCFYGVELDGRIDYEKVREIAKKEKPKLIVCGA 172 (417)
T ss_dssp SCTTCEEEEECC----------------CCSEEEEECCCTTSSCCHHHHHHHHHHHCCSEEEECC
T ss_pred cCCCCEEEecccccccccchhhhhhhhcceeeeEeccCCCCCCcCHHHHHHHHHhcCCeEEEECC
Confidence 578999998887654332211 122224444555432 26788999999877888888764
No 193
>1jg8_A L-ALLO-threonine aldolase; glycine biosynthesis, pyridoxal-5'- phosphate, calcium binding site, structural genomics, PSI; HET: LLP; 1.80A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1lw4_A* 1lw5_A* 1m6s_A* 2fm1_A*
Probab=20.32 E-value=75 Score=27.54 Aligned_cols=57 Identities=12% Similarity=0.144 Sum_probs=30.4
Q ss_pred CCCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCCC----CCHHHHHHHHHhc-----CceEEEEc
Q 014951 6 VNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDT----LGANAVEFIINHA-----EVSIAFVQ 63 (415)
Q Consensus 6 v~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~~----~~~~~l~~~l~~~-----~~~~ii~~ 63 (415)
+++||.|.+..+.....+-..-++...|+.++++ .. .+.+++...++.. +.++|+..
T Consensus 74 ~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v-~~~~~~~d~~~l~~~i~~~~~~~~~~~~v~~~ 139 (347)
T 1jg8_A 74 TQRGDEVILEADSHIFWYEVGAMAVLSGVMPHPV-PGKNGAMDPDDVRKAIRPRNIHFPRTSLIAIE 139 (347)
T ss_dssp CCTTCEEEEETTCHHHHSSTTHHHHHTCCEEEEE-CEETTEECHHHHHHHSCCSCTTSCCEEEEEEE
T ss_pred cCCCCEEEEcCcchhhhccccchhhccCeEEEEe-cCCCCccCHHHHHHHhccccccccCceEEEEe
Confidence 3678888776554222111011344567777776 32 3566676666531 45666654
No 194
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=20.29 E-value=2.3e+02 Score=24.60 Aligned_cols=53 Identities=8% Similarity=-0.126 Sum_probs=37.5
Q ss_pred CCCCCCeEEEEcCCcHhHHHHHHHHHHc-CCEEEecCCCCCHHHHHHHHHhcCceEEE
Q 014951 5 GVNPGDRCGIYGSNCPEWIIAMEACNSQ-AITYVPLYDTLGANAVEFIINHAEVSIAF 61 (415)
Q Consensus 5 Gv~~gd~V~l~~~n~~~~~~~~lA~~~~-G~~~~~l~~~~~~~~l~~~l~~~~~~~ii 61 (415)
++ +|++|+|...-.+-.+++++|-... |+.++.+.. +.+.+. +++..+++.++
T Consensus 168 ~~-~g~~VlV~GaG~vG~~aiqlak~~~~Ga~Vi~~~~--~~~~~~-~~~~lGa~~vi 221 (344)
T 2h6e_A 168 KF-AEPVVIVNGIGGLAVYTIQILKALMKNITIVGISR--SKKHRD-FALELGADYVS 221 (344)
T ss_dssp TC-SSCEEEEECCSHHHHHHHHHHHHHCTTCEEEEECS--CHHHHH-HHHHHTCSEEE
T ss_pred CC-CCCEEEEECCCHHHHHHHHHHHHhcCCCEEEEEeC--CHHHHH-HHHHhCCCEEe
Confidence 78 9999999999667888888887653 877666654 344443 34556666655
No 195
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=20.22 E-value=1.2e+02 Score=26.60 Aligned_cols=56 Identities=11% Similarity=0.020 Sum_probs=37.3
Q ss_pred cCCCCCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEE
Q 014951 3 SRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFV 62 (415)
Q Consensus 3 ~~Gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~ii~ 62 (415)
+.++++|++|+|...-.+-..++.+|-. .|+.++.+..+-. .+ .+++..+++.++.
T Consensus 174 ~~~~~~g~~VlV~GaG~vG~~~~qlak~-~Ga~Vi~~~~~~~--~~-~~~~~lGa~~v~~ 229 (360)
T 1piw_A 174 RNGCGPGKKVGIVGLGGIGSMGTLISKA-MGAETYVISRSSR--KR-EDAMKMGADHYIA 229 (360)
T ss_dssp HTTCSTTCEEEEECCSHHHHHHHHHHHH-HTCEEEEEESSST--TH-HHHHHHTCSEEEE
T ss_pred HcCCCCCCEEEEECCCHHHHHHHHHHHH-CCCEEEEEcCCHH--HH-HHHHHcCCCEEEc
Confidence 4689999999999996678888887764 5877666654322 22 2234456666653
No 196
>2rfv_A Methionine gamma-lyase; pyridoxal-5'-phosphate, PLP-dependent enzyme; HET: LLP; 1.35A {Citrobacter freundii} PDB: 1y4i_A* 3jwa_A* 3jw9_A* 3jwb_A* 3mkj_A*
Probab=20.21 E-value=2.1e+02 Score=25.35 Aligned_cols=56 Identities=7% Similarity=0.032 Sum_probs=31.0
Q ss_pred CCCCCeEEEEcCCcHhHHHHHH-HHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEc
Q 014951 6 VNPGDRCGIYGSNCPEWIIAME-ACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQ 63 (415)
Q Consensus 6 v~~gd~V~l~~~n~~~~~~~~l-A~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~ii~~ 63 (415)
+++||.|.+..+....+.-.+- .+...|+.++.++.. ..+++...++. ++++++..
T Consensus 100 ~~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-d~~~l~~~i~~-~~~~v~~~ 156 (398)
T 2rfv_A 100 CQQGDHIVSASAIYGCTHAFLSHSMPKFGINVRFVDAA-KPEEIRAAMRP-ETKVVYIE 156 (398)
T ss_dssp CCTTCEEEEESSSCHHHHHHHHTHHHHTTCEEEEECTT-SHHHHHHHCCT-TEEEEEEE
T ss_pred hCCCCEEEEcCCCcccHHHHHHHHHHHcCCEEEEeCCC-CHHHHHHhcCC-CCeEEEEE
Confidence 3577777777665554433221 124567776666543 55666655543 45666654
No 197
>1elu_A L-cysteine/L-cystine C-S lyase; FES cluster biosynthesis, pyridoxal 5'-phosphate, thiocystei aminoacrylate, enzyme-product complex; HET: PDA; 1.55A {Synechocystis SP} SCOP: c.67.1.3 PDB: 1elq_A* 1n2t_A* 1n31_A*
Probab=20.20 E-value=1.2e+02 Score=26.57 Aligned_cols=58 Identities=16% Similarity=0.152 Sum_probs=33.3
Q ss_pred CCCCCeEEEEcCCcHhHHHHHHH-HHHcCCEEEecCCC------CCHHHHHHHHHhcCceEEEEcC
Q 014951 6 VNPGDRCGIYGSNCPEWIIAMEA-CNSQAITYVPLYDT------LGANAVEFIINHAEVSIAFVQE 64 (415)
Q Consensus 6 v~~gd~V~l~~~n~~~~~~~~lA-~~~~G~~~~~l~~~------~~~~~l~~~l~~~~~~~ii~~~ 64 (415)
+++||.|.+..+....+.-.+.. +...|+.++.++.. ...+.+...++. ++++|+...
T Consensus 98 ~~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~-~~~~v~~~~ 162 (390)
T 1elu_A 98 WHQGDEILLTDCEHPGIIAIVQAIAARFGITYRFFPVAATLNQGDAAAVLANHLGP-KTRLVILSH 162 (390)
T ss_dssp CCTTCEEEEETTCCHHHHHHHHHHHHHHCCEEEEECCGGGSSSSCHHHHHHTTCCT-TEEEEEEES
T ss_pred CCCCCEEEEecCcccHHHHHHHHHHHHhCcEEEEEcCCCCCCccchHHHHHHhcCC-CceEEEEec
Confidence 57888888887776665543333 34457766655432 334555554432 456666543
No 198
>3cog_A Cystathionine gamma-lyase; CTH, PLP, propargylglycine, SGC, inhibitor, structural genom stockholm, structural genomics consortium; HET: PLP; 2.00A {Homo sapiens} PDB: 2nmp_A* 3elp_B
Probab=20.12 E-value=1.8e+02 Score=25.97 Aligned_cols=56 Identities=9% Similarity=0.051 Sum_probs=33.5
Q ss_pred CCCCCeEEEEcCCcHhHHHHHH-HHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEc
Q 014951 6 VNPGDRCGIYGSNCPEWIIAME-ACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQ 63 (415)
Q Consensus 6 v~~gd~V~l~~~n~~~~~~~~l-A~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~ii~~ 63 (415)
+++||.|.+..+.....+-.+- .+...|+.+..++.. ..+.+...++. +.++|+..
T Consensus 102 ~~~gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~v~~~-d~~~l~~~i~~-~t~~v~~~ 158 (403)
T 3cog_A 102 LKAGDQIICMDDVYGGTNRYFRQVASEFGLKISFVDCS-KIKLLEAAITP-ETKLVWIE 158 (403)
T ss_dssp SCTTCEEEEESSCCHHHHHHHHHTGGGGTCEEEEECTT-SHHHHHHHCCT-TEEEEEEE
T ss_pred hCCCCEEEEeCCCcchHHHHHHHHHHHcCCEEEEECCC-CHHHHHHhcCc-CCeEEEEE
Confidence 4678888777766554433222 234668777777654 56666665543 56666654
No 199
>1j32_A Aspartate aminotransferase; HET: PLP; 2.10A {Phormidium lapideum} SCOP: c.67.1.1
Probab=20.10 E-value=2.2e+02 Score=24.95 Aligned_cols=54 Identities=19% Similarity=0.171 Sum_probs=30.5
Q ss_pred CCCCCeEEEEcCCcHhHHHHHHHHHHcCCEEEecCCC------CCHHHHHHHHHhcCceEEEEc
Q 014951 6 VNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDT------LGANAVEFIINHAEVSIAFVQ 63 (415)
Q Consensus 6 v~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~~~l~~~------~~~~~l~~~l~~~~~~~ii~~ 63 (415)
+++||.|.+..+....+. .++...|+.++.++.. ...+.+...++. ++++++..
T Consensus 111 ~~~gd~vl~~~~~~~~~~---~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~-~~~~v~~~ 170 (388)
T 1j32_A 111 IEPGDEVIIPAPFWVSYP---EMVKLAEGTPVILPTTVETQFKVSPEQIRQAITP-KTKLLVFN 170 (388)
T ss_dssp CCTTCEEEEESSCCTHHH---HHHHHTTCEEEEECCCGGGTTCCCHHHHHHHCCT-TEEEEEEE
T ss_pred cCCCCEEEEcCCCChhHH---HHHHHcCCEEEEecCCcccCCCCCHHHHHHhcCc-CceEEEEe
Confidence 357888777766555443 2345567666555432 356666666543 45655543
Done!