Query 014952
Match_columns 415
No_of_seqs 141 out of 1376
Neff 10.4
Searched_HMMs 46136
Date Fri Mar 29 01:40:40 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014952.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/014952hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1176 Acyl-CoA synthetase [L 100.0 1E-56 2.2E-61 426.5 36.7 369 32-412 23-405 (537)
2 PLN02246 4-coumarate--CoA liga 100.0 9E-56 2E-60 436.5 43.3 401 10-411 8-408 (537)
3 COG0318 CaiC Acyl-CoA syntheta 100.0 2.6E-56 5.7E-61 437.3 39.1 382 22-411 8-397 (534)
4 KOG1177 Long chain fatty acid 100.0 1.7E-56 3.8E-61 397.8 29.8 380 24-410 49-456 (596)
5 COG0365 Acs Acyl-coenzyme A sy 100.0 1.4E-55 2.9E-60 416.5 33.2 378 19-413 2-395 (528)
6 PTZ00342 acyl-CoA synthetase; 100.0 8.6E-55 1.9E-59 436.1 36.8 380 23-412 59-567 (746)
7 COG1021 EntE Peptide arylation 100.0 9.8E-56 2.1E-60 384.6 23.3 399 1-411 4-410 (542)
8 PLN02614 long-chain acyl-CoA s 100.0 2.4E-54 5.1E-59 433.5 35.4 383 22-411 42-493 (666)
9 PLN02574 4-coumarate--CoA liga 100.0 3.1E-53 6.8E-58 420.0 41.6 397 6-411 19-426 (560)
10 PRK06334 long chain fatty acid 100.0 3.5E-53 7.6E-58 417.1 37.7 373 23-408 17-402 (539)
11 PLN02736 long-chain acyl-CoA s 100.0 4.8E-53 1E-57 424.9 37.5 378 22-411 41-483 (651)
12 COG1022 FAA1 Long-chain acyl-C 100.0 1.8E-53 3.9E-58 407.4 31.4 365 23-412 14-446 (613)
13 PLN02861 long-chain-fatty-acid 100.0 5.8E-53 1.3E-57 423.8 35.4 382 22-411 40-490 (660)
14 PLN02330 4-coumarate--CoA liga 100.0 2E-51 4.3E-56 406.3 42.0 400 6-411 9-413 (546)
15 PRK07788 acyl-CoA synthetase; 100.0 6.5E-52 1.4E-56 410.1 37.8 366 25-406 49-422 (549)
16 PF00501 AMP-binding: AMP-bind 100.0 2.8E-53 6.1E-58 406.2 26.7 370 31-412 1-385 (417)
17 PRK08314 long-chain-fatty-acid 100.0 1.5E-51 3.2E-56 407.7 39.7 375 24-412 9-410 (546)
18 PLN02387 long-chain-fatty-acid 100.0 2.6E-52 5.6E-57 420.8 34.8 381 22-412 55-528 (696)
19 TIGR02316 propion_prpE propion 100.0 1.2E-51 2.6E-56 413.4 39.0 390 16-411 42-465 (628)
20 PLN02654 acetate-CoA ligase 100.0 2.6E-51 5.6E-56 412.3 38.5 388 16-412 78-508 (666)
21 PLN02860 o-succinylbenzoate-Co 100.0 2.5E-51 5.4E-56 406.7 37.1 375 24-411 6-410 (563)
22 TIGR02188 Ac_CoA_lig_AcsA acet 100.0 6.2E-51 1.3E-55 408.7 38.8 388 17-412 48-470 (625)
23 PRK13295 cyclohexanecarboxylat 100.0 1.5E-50 3.2E-55 400.1 40.1 375 24-409 23-415 (547)
24 KOG1256 Long-chain acyl-CoA sy 100.0 3E-51 6.5E-56 386.6 32.9 382 22-411 72-523 (691)
25 PRK05677 long-chain-fatty-acid 100.0 2.2E-50 4.8E-55 400.0 40.6 378 24-412 23-430 (562)
26 PTZ00216 acyl-CoA synthetase; 100.0 4.6E-51 1E-55 412.7 35.5 379 23-412 67-533 (700)
27 PRK05605 long-chain-fatty-acid 100.0 2.8E-50 6E-55 400.5 39.4 394 9-411 12-442 (573)
28 PRK00174 acetyl-CoA synthetase 100.0 2.7E-50 5.9E-55 404.7 39.7 389 16-412 57-478 (637)
29 PRK07656 long-chain-fatty-acid 100.0 3.8E-50 8.2E-55 394.9 39.7 377 24-411 4-388 (513)
30 PRK04319 acetyl-CoA synthetase 100.0 1.9E-50 4E-55 401.2 37.7 382 18-411 35-429 (570)
31 PRK09274 peptide synthase; Pro 100.0 7.2E-51 1.6E-55 403.1 34.4 377 24-412 5-413 (552)
32 PTZ00237 acetyl-CoA synthetase 100.0 1.2E-50 2.7E-55 406.0 35.6 384 17-411 50-487 (647)
33 PRK08180 feruloyl-CoA synthase 100.0 2.1E-50 4.6E-55 403.4 37.1 370 24-411 38-436 (614)
34 PRK07529 AMP-binding domain pr 100.0 1.6E-49 3.4E-54 398.0 41.1 376 24-411 24-441 (632)
35 PRK10524 prpE propionyl-CoA sy 100.0 6.3E-50 1.4E-54 401.7 37.7 391 17-412 44-467 (629)
36 PRK08316 acyl-CoA synthetase; 100.0 1.3E-49 2.8E-54 392.0 39.1 378 23-411 9-392 (523)
37 PLN02430 long-chain-fatty-acid 100.0 6.9E-50 1.5E-54 400.9 36.7 383 22-411 39-490 (660)
38 PRK08315 AMP-binding domain pr 100.0 1.6E-49 3.6E-54 394.2 39.0 382 24-411 15-423 (559)
39 PRK06187 long-chain-fatty-acid 100.0 1.6E-49 3.5E-54 391.2 38.6 380 22-411 3-392 (521)
40 TIGR02275 DHB_AMP_lig 2,3-dihy 100.0 2E-49 4.4E-54 390.4 38.6 380 19-411 17-404 (527)
41 PRK05857 acyl-CoA synthetase; 100.0 8.7E-50 1.9E-54 393.7 34.9 380 25-411 14-399 (540)
42 PRK12467 peptide synthase; Pro 100.0 2.3E-50 5.1E-55 464.5 35.6 369 22-413 3092-3462(3956)
43 PRK07514 malonyl-CoA synthase; 100.0 5E-49 1.1E-53 386.0 40.0 372 24-412 2-374 (504)
44 PRK06839 acyl-CoA synthetase; 100.0 2.1E-49 4.5E-54 387.9 37.1 363 26-410 3-367 (496)
45 PRK05852 acyl-CoA synthetase; 100.0 2.8E-49 6.1E-54 390.0 37.7 388 16-411 7-405 (534)
46 PRK13382 acyl-CoA synthetase; 100.0 4.7E-49 1E-53 388.2 39.3 361 24-401 42-406 (537)
47 PRK07059 Long-chain-fatty-acid 100.0 5.6E-49 1.2E-53 389.8 39.9 395 9-411 2-431 (557)
48 PRK08633 2-acyl-glycerophospho 100.0 1.6E-49 3.5E-54 425.1 38.5 383 22-411 612-1012(1146)
49 PRK07786 long-chain-fatty-acid 100.0 4.1E-49 8.8E-54 389.4 38.0 376 23-411 15-396 (542)
50 PRK03640 O-succinylbenzoic aci 100.0 3.6E-49 7.8E-54 385.0 37.1 356 25-411 2-357 (483)
51 PRK12582 acyl-CoA synthetase; 100.0 2.6E-49 5.6E-54 396.3 36.1 373 22-411 46-448 (624)
52 PRK10946 entE enterobactin syn 100.0 6E-49 1.3E-53 387.5 38.0 395 1-411 1-405 (536)
53 PRK06087 short chain acyl-CoA 100.0 1.3E-48 2.7E-53 386.6 39.7 377 23-411 21-406 (547)
54 PRK07638 acyl-CoA synthetase; 100.0 6.6E-49 1.4E-53 383.3 36.8 356 25-409 1-356 (487)
55 PRK12492 long-chain-fatty-acid 100.0 1.8E-48 4E-53 386.3 40.1 395 9-411 3-437 (562)
56 PRK07769 long-chain-fatty-acid 100.0 2.7E-49 5.9E-54 397.1 34.5 376 20-412 16-444 (631)
57 TIGR03208 cyc_hxne_CoA_lg cycl 100.0 2.1E-48 4.6E-53 384.1 40.0 374 24-408 21-412 (538)
58 PRK06145 acyl-CoA synthetase; 100.0 1.4E-48 3.1E-53 382.0 38.2 369 25-411 2-370 (497)
59 PRK06060 acyl-CoA synthetase; 100.0 4.1E-49 8.9E-54 400.2 35.5 354 25-408 4-361 (705)
60 TIGR03098 ligase_PEP_1 acyl-Co 100.0 1.6E-48 3.5E-53 383.4 38.6 371 26-411 1-379 (515)
61 PRK12476 putative fatty-acid-- 100.0 2.2E-49 4.8E-54 396.2 32.4 372 22-411 31-454 (612)
62 PRK07470 acyl-CoA synthetase; 100.0 2.1E-48 4.5E-53 383.5 38.1 379 24-411 6-391 (528)
63 PRK06155 crotonobetaine/carnit 100.0 3.3E-48 7.1E-53 382.5 39.4 371 24-411 20-397 (542)
64 PRK06178 acyl-CoA synthetase; 100.0 5.9E-48 1.3E-52 383.3 40.8 400 6-411 12-439 (567)
65 PRK06710 long-chain-fatty-acid 100.0 4.1E-48 8.8E-53 384.2 39.3 392 9-411 4-428 (563)
66 PRK12583 acyl-CoA synthetase; 100.0 5.2E-48 1.1E-52 383.5 39.7 381 24-411 17-424 (558)
67 TIGR02262 benz_CoA_lig benzoat 100.0 8.6E-48 1.9E-52 377.4 39.4 370 29-411 8-381 (508)
68 PRK12467 peptide synthase; Pro 100.0 9.3E-49 2E-53 451.3 37.4 371 22-412 1571-1944(3956)
69 PRK10252 entF enterobactin syn 100.0 1.9E-48 4E-53 421.1 37.6 365 25-413 458-829 (1296)
70 PRK03584 acetoacetyl-CoA synth 100.0 1.5E-47 3.3E-52 385.8 39.8 378 16-407 77-486 (655)
71 PRK06188 acyl-CoA synthetase; 100.0 1.6E-47 3.5E-52 376.9 38.6 375 24-410 11-389 (524)
72 PLN03052 acetate--CoA ligase; 100.0 1.8E-47 3.8E-52 385.7 39.4 376 18-403 167-572 (728)
73 PRK12316 peptide synthase; Pro 100.0 1.7E-48 3.7E-53 455.6 36.1 370 22-412 4548-4919(5163)
74 PRK06164 acyl-CoA synthetase; 100.0 1.3E-47 2.7E-52 379.0 36.9 382 19-412 4-403 (540)
75 TIGR03205 pimA dicarboxylate-- 100.0 5.9E-47 1.3E-51 374.1 41.6 392 11-411 6-418 (541)
76 PRK08008 caiC putative crotono 100.0 3.8E-47 8.1E-52 373.7 40.0 378 23-411 5-394 (517)
77 PRK12316 peptide synthase; Pro 100.0 2.3E-48 4.9E-53 454.6 36.8 378 12-412 1992-2371(5163)
78 TIGR01734 D-ala-DACP-lig D-ala 100.0 8.3E-48 1.8E-52 377.2 35.1 365 26-412 1-368 (502)
79 PRK08751 putative long-chain f 100.0 4.2E-47 9E-52 376.8 40.1 393 11-411 6-433 (560)
80 PRK08974 long-chain-fatty-acid 100.0 6.6E-47 1.4E-51 375.3 40.6 393 9-410 2-428 (560)
81 TIGR03443 alpha_am_amid L-amin 100.0 1.1E-47 2.5E-52 416.5 35.9 381 24-412 235-647 (1389)
82 PRK07867 acyl-CoA synthetase; 100.0 1E-46 2.2E-51 370.6 39.0 363 22-411 2-378 (529)
83 PRK08043 bifunctional acyl-[ac 100.0 2.6E-47 5.6E-52 387.3 35.8 360 24-403 203-570 (718)
84 PRK05691 peptide synthase; Val 100.0 1.1E-47 2.3E-52 446.1 37.4 369 22-412 3717-4092(4334)
85 KOG1180 Acyl-CoA synthetase [L 100.0 4E-48 8.7E-53 350.1 26.3 387 17-413 33-510 (678)
86 PLN03102 acyl-activating enzym 100.0 9E-47 2E-51 374.7 38.6 376 25-411 14-417 (579)
87 TIGR01217 ac_ac_CoA_syn acetoa 100.0 1E-46 2.2E-51 378.4 38.7 376 17-407 79-487 (652)
88 PRK13383 acyl-CoA synthetase; 100.0 1.2E-46 2.7E-51 369.7 37.4 354 24-406 34-391 (516)
89 PRK05851 long-chain-fatty-acid 100.0 2.5E-47 5.3E-52 375.0 32.1 362 25-408 1-394 (525)
90 PRK07008 long-chain-fatty-acid 100.0 3.3E-46 7.1E-51 368.3 39.7 375 25-405 10-403 (539)
91 PRK13388 acyl-CoA synthetase; 100.0 1.4E-46 3E-51 370.7 36.8 361 25-411 3-377 (540)
92 PRK04813 D-alanine--poly(phosp 100.0 8.7E-47 1.9E-51 370.1 34.2 366 25-412 2-370 (503)
93 PRK05691 peptide synthase; Val 100.0 2.5E-47 5.5E-52 442.9 35.0 364 23-412 1129-1495(4334)
94 PRK09088 acyl-CoA synthetase; 100.0 1.2E-46 2.7E-51 367.5 34.4 353 32-411 2-357 (488)
95 PRK05620 long-chain-fatty-acid 100.0 9.6E-46 2.1E-50 367.9 39.5 377 24-407 9-406 (576)
96 PRK06018 putative acyl-CoA syn 100.0 1.3E-45 2.8E-50 364.5 39.2 373 24-405 9-403 (542)
97 PRK13390 acyl-CoA synthetase; 100.0 3.6E-46 7.7E-51 365.3 34.2 365 33-411 5-373 (501)
98 PLN02479 acetate-CoA ligase 100.0 2.4E-45 5.2E-50 364.2 39.7 380 23-411 18-427 (567)
99 PRK08279 long-chain-acyl-CoA s 100.0 1.3E-45 2.8E-50 368.7 37.0 373 23-412 35-430 (600)
100 PRK05850 acyl-CoA synthetase; 100.0 1.7E-45 3.7E-50 366.6 33.0 373 25-411 1-422 (578)
101 PRK07787 acyl-CoA synthetase; 100.0 7.5E-45 1.6E-49 353.0 34.6 336 35-412 10-347 (471)
102 PRK08162 acyl-CoA synthetase; 100.0 5.4E-44 1.2E-48 353.5 39.5 379 24-411 17-413 (545)
103 PRK07798 acyl-CoA synthetase; 100.0 4.7E-44 1E-48 353.3 38.6 374 25-412 3-402 (533)
104 TIGR01733 AA-adenyl-dom amino 100.0 1.5E-44 3.3E-49 344.9 33.2 340 54-413 1-345 (408)
105 PRK06814 acylglycerophosphoeth 100.0 2.9E-44 6.4E-49 383.4 38.7 365 24-407 630-1002(1140)
106 PRK13391 acyl-CoA synthetase; 100.0 3.6E-44 7.9E-49 351.9 36.0 364 32-412 4-378 (511)
107 PRK09192 acyl-CoA synthetase; 100.0 1.7E-44 3.6E-49 359.1 33.7 377 20-411 16-435 (579)
108 PRK08276 long-chain-fatty-acid 100.0 3.6E-43 7.9E-48 344.2 35.3 358 43-412 2-366 (502)
109 KOG1179 Very long-chain acyl-C 100.0 2.2E-43 4.7E-48 320.8 30.3 377 23-413 75-480 (649)
110 PRK12406 long-chain-fatty-acid 100.0 8.6E-43 1.9E-47 342.1 35.9 350 43-410 4-375 (509)
111 PRK07768 long-chain-fatty-acid 100.0 1.3E-42 2.7E-47 343.7 35.3 362 26-406 3-406 (545)
112 PRK07868 acyl-CoA synthetase; 100.0 5.7E-42 1.2E-46 356.5 37.5 350 22-396 444-819 (994)
113 PRK09029 O-succinylbenzoic aci 100.0 9E-42 1.9E-46 330.4 33.3 322 27-408 4-326 (458)
114 PRK07445 O-succinylbenzoic aci 100.0 4.2E-41 9.1E-46 323.7 29.2 300 53-405 20-320 (452)
115 TIGR01923 menE O-succinylbenzo 100.0 1.4E-40 2.9E-45 320.4 31.0 316 54-410 1-316 (436)
116 PLN03051 acyl-activating enzym 100.0 1.5E-40 3.2E-45 324.8 30.2 312 84-405 1-340 (499)
117 KOG1175 Acyl-CoA synthetase [L 100.0 2.4E-40 5.3E-45 313.7 28.7 390 15-413 53-471 (626)
118 PRK08308 acyl-CoA synthetase; 100.0 1.3E-38 2.8E-43 304.1 33.0 288 44-394 2-289 (414)
119 PTZ00297 pantothenate kinase; 100.0 2.5E-38 5.4E-43 329.9 32.6 363 14-410 418-842 (1452)
120 COG1020 EntF Non-ribosomal pep 100.0 4.3E-35 9.3E-40 295.4 32.1 367 20-413 222-594 (642)
121 TIGR03089 conserved hypothetic 100.0 8.6E-28 1.9E-32 208.1 21.8 211 31-277 2-227 (227)
122 PRK07824 O-succinylbenzoic aci 99.9 5.3E-25 1.2E-29 206.3 20.9 193 178-407 31-228 (358)
123 KOG3628 Predicted AMP-binding 99.9 4.2E-24 9.1E-29 207.4 27.4 373 25-403 770-1197(1363)
124 TIGR02155 PA_CoA_ligase phenyl 99.9 2.6E-23 5.6E-28 198.8 15.7 204 180-394 73-281 (422)
125 TIGR03335 F390_ftsA coenzyme F 99.9 5E-22 1.1E-26 190.3 15.8 200 180-395 84-287 (445)
126 TIGR02372 4_coum_CoA_lig 4-cou 99.9 2.3E-21 5.1E-26 181.2 16.3 169 182-372 95-265 (386)
127 COG1541 PaaK Coenzyme F390 syn 99.8 4.8E-18 1E-22 155.4 15.3 204 178-393 86-293 (438)
128 KOG3628 Predicted AMP-binding 99.7 1.2E-16 2.5E-21 156.3 16.4 379 23-411 92-555 (1363)
129 KOG1178 Non-ribosomal peptide 99.6 3.9E-15 8.4E-20 149.6 16.1 307 25-345 36-371 (1032)
130 TIGR02304 aden_form_hyp probab 99.3 5.2E-11 1.1E-15 112.1 14.1 149 184-343 101-252 (430)
131 PF04443 LuxE: Acyl-protein sy 99.0 8E-09 1.7E-13 95.2 15.4 204 180-397 87-314 (365)
132 COG1541 PaaK Coenzyme F390 syn 95.4 0.16 3.4E-06 47.9 10.2 91 52-143 109-201 (438)
133 PLN02247 indole-3-acetic acid- 94.7 3 6.5E-05 41.6 17.4 42 300-341 292-334 (606)
134 PLN02620 indole-3-acetic acid- 93.3 2.4 5.2E-05 42.2 13.6 42 300-341 303-345 (612)
135 TIGR03335 F390_ftsA coenzyme F 89.1 4.8 0.0001 39.0 11.1 82 51-135 104-187 (445)
136 TIGR02155 PA_CoA_ligase phenyl 89.0 4.3 9.3E-05 38.9 10.7 88 52-140 94-183 (422)
137 PF00501 AMP-binding: AMP-bind 84.3 4.1 9E-05 38.7 7.8 92 179-281 7-99 (417)
138 KOG1177 Long chain fatty acid 83.6 6.6 0.00014 37.5 8.2 110 198-310 74-198 (596)
139 TIGR03590 PseG pseudaminic aci 82.7 20 0.00043 32.2 11.0 91 60-156 18-113 (279)
140 PRK07656 long-chain-fatty-acid 80.2 20 0.00042 35.2 11.0 100 38-141 164-272 (513)
141 PLN03052 acetate--CoA ligase; 79.9 13 0.00028 38.6 9.9 101 180-284 188-289 (728)
142 PTZ00237 acetyl-CoA synthetase 78.2 15 0.00032 37.6 9.7 97 181-283 75-172 (647)
143 PLN02654 acetate-CoA ligase 78.0 16 0.00034 37.6 9.8 99 180-284 102-201 (666)
144 PRK06187 long-chain-fatty-acid 77.7 32 0.0007 33.7 11.7 99 39-141 166-272 (521)
145 PRK09274 peptide synthase; Pro 77.4 13 0.00029 36.9 9.0 100 181-283 20-121 (552)
146 TIGR02188 Ac_CoA_lig_AcsA acet 76.9 16 0.00034 37.1 9.4 99 180-284 70-169 (625)
147 TIGR03089 conserved hypothetic 76.7 20 0.00044 31.0 8.8 54 70-125 171-226 (227)
148 PLN02736 long-chain acyl-CoA s 76.6 22 0.00047 36.4 10.3 89 200-291 77-166 (651)
149 PRK06839 acyl-CoA synthetase; 75.3 25 0.00053 34.3 10.1 99 180-289 15-114 (496)
150 PRK00174 acetyl-CoA synthetase 75.1 19 0.00042 36.6 9.5 98 180-283 80-178 (637)
151 PRK04319 acetyl-CoA synthetase 74.4 24 0.00052 35.3 9.9 87 200-289 72-159 (570)
152 PLN03102 acyl-activating enzym 72.5 23 0.00049 35.6 9.2 95 180-286 27-122 (579)
153 PRK08316 acyl-CoA synthetase; 72.5 23 0.0005 34.8 9.2 87 200-289 35-122 (523)
154 PRK08008 caiC putative crotono 72.1 29 0.00063 34.1 9.8 101 180-287 20-121 (517)
155 TIGR01923 menE O-succinylbenzo 72.0 30 0.00065 33.0 9.6 96 39-140 110-213 (436)
156 TIGR01217 ac_ac_CoA_syn acetoa 71.9 25 0.00055 35.9 9.5 95 182-283 99-194 (652)
157 TIGR02316 propion_prpE propion 71.8 29 0.00063 35.3 9.8 98 180-283 65-163 (628)
158 PRK07529 AMP-binding domain pr 71.7 20 0.00043 36.5 8.7 98 180-282 38-136 (632)
159 PRK03584 acetoacetyl-CoA synth 71.6 27 0.00059 35.7 9.7 97 180-283 97-194 (655)
160 TIGR03098 ligase_PEP_1 acyl-Co 71.5 26 0.00057 34.3 9.3 84 201-287 25-109 (515)
161 PF01041 DegT_DnrJ_EryC1: DegT 71.2 30 0.00066 32.3 9.2 80 65-148 53-142 (363)
162 PRK06334 long chain fatty acid 71.2 56 0.0012 32.5 11.5 100 38-140 181-289 (539)
163 PRK13295 cyclohexanecarboxylat 70.6 25 0.00054 34.9 9.0 98 180-283 37-135 (547)
164 PRK05857 acyl-CoA synthetase; 70.5 23 0.00049 35.2 8.6 96 180-285 27-123 (540)
165 PRK08315 AMP-binding domain pr 70.1 59 0.0013 32.3 11.5 95 39-136 198-301 (559)
166 PRK12583 acyl-CoA synthetase; 69.7 67 0.0014 31.9 11.8 95 39-136 200-303 (558)
167 PRK07788 acyl-CoA synthetase; 69.7 19 0.00042 35.8 7.9 86 201-289 74-160 (549)
168 COG1064 AdhP Zn-dependent alco 69.5 28 0.00061 32.0 8.1 61 68-132 158-218 (339)
169 PRK07798 acyl-CoA synthetase; 69.4 34 0.00074 33.6 9.6 87 200-289 27-114 (533)
170 PLN02565 cysteine synthase 68.7 71 0.0015 29.4 10.7 91 41-133 31-122 (322)
171 PLN02614 long-chain acyl-CoA s 68.7 48 0.001 34.0 10.7 88 200-290 78-166 (666)
172 PLN02387 long-chain-fatty-acid 68.2 31 0.00067 35.6 9.2 104 200-310 105-209 (696)
173 COG0399 WecE Predicted pyridox 68.2 52 0.0011 30.9 9.7 85 63-150 60-153 (374)
174 PRK05677 long-chain-fatty-acid 68.2 31 0.00067 34.5 9.0 85 200-286 48-133 (562)
175 PLN02246 4-coumarate--CoA liga 67.4 33 0.0007 34.0 9.0 98 180-287 36-134 (537)
176 PLN03051 acyl-activating enzym 67.4 46 0.001 32.6 10.0 98 39-139 118-223 (499)
177 PRK13388 acyl-CoA synthetase; 66.9 35 0.00076 33.9 9.1 95 181-287 15-111 (540)
178 PLN02574 4-coumarate--CoA liga 66.5 38 0.00082 33.8 9.3 101 180-289 52-153 (560)
179 PRK10524 prpE propionyl-CoA sy 65.7 41 0.00088 34.2 9.5 98 180-283 66-164 (629)
180 COG0365 Acs Acyl-coenzyme A sy 65.7 24 0.00053 34.8 7.4 102 181-289 24-126 (528)
181 KOG0023 Alcohol dehydrogenase, 65.5 54 0.0012 29.9 8.7 76 68-146 173-248 (360)
182 PRK08279 long-chain-acyl-CoA s 65.4 41 0.00089 33.9 9.4 97 180-288 50-147 (600)
183 PLN02330 4-coumarate--CoA liga 64.5 32 0.0007 34.2 8.3 98 180-287 41-139 (546)
184 PRK05850 acyl-CoA synthetase; 64.1 52 0.0011 33.0 9.8 104 180-289 14-123 (578)
185 PRK13383 acyl-CoA synthetase; 63.8 30 0.00065 34.1 7.9 86 201-289 60-146 (516)
186 cd01445 TST_Repeats Thiosulfat 63.7 23 0.0005 27.9 5.7 43 63-105 81-126 (138)
187 PTZ00342 acyl-CoA synthetase; 63.2 73 0.0016 33.3 10.7 120 180-309 74-207 (746)
188 PRK06155 crotonobetaine/carnit 63.1 32 0.00069 34.2 8.0 86 201-289 46-132 (542)
189 PRK13391 acyl-CoA synthetase; 63.1 54 0.0012 32.2 9.6 98 180-287 10-108 (511)
190 KOG1176 Acyl-CoA synthetase [L 63.0 25 0.00054 34.9 6.9 92 199-292 43-136 (537)
191 PLN02861 long-chain-fatty-acid 62.9 38 0.00082 34.7 8.6 88 200-290 76-164 (660)
192 TIGR01733 AA-adenyl-dom amino 62.5 23 0.0005 33.4 6.7 66 222-289 20-86 (408)
193 PRK07059 Long-chain-fatty-acid 61.8 47 0.001 33.1 9.0 96 180-287 36-132 (557)
194 PLN02479 acetate-CoA ligase 61.5 58 0.0013 32.5 9.6 95 180-286 33-128 (567)
195 TIGR03443 alpha_am_amid L-amin 61.4 37 0.00081 38.3 8.9 101 179-282 248-349 (1389)
196 PRK06087 short chain acyl-CoA 61.3 42 0.00092 33.3 8.5 92 180-282 36-128 (547)
197 PRK05605 long-chain-fatty-acid 61.1 31 0.00068 34.5 7.6 98 180-289 45-143 (573)
198 PRK03640 O-succinylbenzoic aci 61.0 64 0.0014 31.3 9.6 95 180-286 15-110 (483)
199 PLN02860 o-succinylbenzoate-Co 61.0 1E+02 0.0022 30.8 11.2 99 38-140 170-276 (563)
200 PRK07514 malonyl-CoA synthase; 60.8 36 0.00078 33.2 7.9 87 199-288 26-113 (504)
201 PRK07470 acyl-CoA synthetase; 60.4 56 0.0012 32.2 9.2 84 200-286 31-115 (528)
202 PRK06188 acyl-CoA synthetase; 59.8 1.3E+02 0.0028 29.6 11.6 97 40-140 168-271 (524)
203 PF03321 GH3: GH3 auxin-respon 59.6 3.8 8.3E-05 40.5 0.7 86 300-395 266-366 (528)
204 COG0031 CysK Cysteine synthase 59.4 1.4E+02 0.003 27.1 10.4 68 64-132 44-116 (300)
205 PRK09088 acyl-CoA synthetase; 59.1 60 0.0013 31.6 9.1 94 180-283 8-102 (488)
206 TIGR02262 benz_CoA_lig benzoat 58.9 69 0.0015 31.4 9.5 96 180-287 18-114 (508)
207 PRK07638 acyl-CoA synthetase; 58.7 1.4E+02 0.003 29.1 11.5 87 51-141 161-248 (487)
208 PRK05620 long-chain-fatty-acid 58.7 66 0.0014 32.2 9.4 102 180-289 23-125 (576)
209 COG0318 CaiC Acyl-CoA syntheta 58.0 65 0.0014 32.0 9.1 95 180-284 24-119 (534)
210 PRK08308 acyl-CoA synthetase; 57.9 1.7E+02 0.0037 27.7 11.8 99 38-140 99-206 (414)
211 PRK02261 methylaspartate mutas 57.9 38 0.00082 26.6 5.9 47 237-283 15-62 (137)
212 KOG1179 Very long-chain acyl-C 57.2 54 0.0012 32.4 7.7 79 59-138 264-345 (649)
213 TIGR01139 cysK cysteine syntha 57.2 99 0.0021 28.0 9.5 91 41-134 22-113 (298)
214 PF01297 TroA: Periplasmic sol 56.0 57 0.0012 28.7 7.5 98 56-155 128-231 (256)
215 TIGR02379 ECA_wecE TDP-4-keto- 56.0 1.2E+02 0.0025 28.7 10.0 58 69-130 63-125 (376)
216 PRK06164 acyl-CoA synthetase; 55.9 1.4E+02 0.003 29.6 11.1 98 39-140 180-285 (540)
217 PRK08162 acyl-CoA synthetase; 55.8 38 0.00081 33.6 7.1 85 201-288 43-128 (545)
218 TIGR01136 cysKM cysteine synth 55.7 1.6E+02 0.0034 26.7 10.5 90 41-133 23-113 (299)
219 PRK08314 long-chain-fatty-acid 55.7 42 0.00091 33.2 7.4 87 201-289 35-122 (546)
220 PRK13390 acyl-CoA synthetase; 55.4 68 0.0015 31.3 8.8 94 180-283 10-104 (501)
221 PRK05852 acyl-CoA synthetase; 54.0 71 0.0015 31.6 8.7 92 180-281 29-121 (534)
222 PRK08751 putative long-chain f 54.0 42 0.00091 33.4 7.1 96 180-286 38-134 (560)
223 TIGR03208 cyc_hxne_CoA_lg cycl 53.4 79 0.0017 31.3 8.9 81 200-283 52-133 (538)
224 PLN02430 long-chain-fatty-acid 53.1 1.3E+02 0.0028 30.9 10.5 87 201-290 76-163 (660)
225 PRK12492 long-chain-fatty-acid 53.0 63 0.0014 32.2 8.2 83 200-284 48-131 (562)
226 PLN02249 indole-3-acetic acid- 52.8 7.1 0.00015 39.1 1.3 29 180-208 98-127 (597)
227 TIGR03772 anch_rpt_subst ancho 52.2 1.2E+02 0.0025 29.8 9.3 74 77-152 370-451 (479)
228 PRK07769 long-chain-fatty-acid 52.1 1.5E+02 0.0032 30.2 10.7 102 180-287 34-141 (631)
229 PLN03013 cysteine synthase 51.7 1.3E+02 0.0028 29.0 9.3 81 51-133 149-230 (429)
230 PF02729 OTCace_N: Aspartate/o 51.5 1.2E+02 0.0026 24.0 12.1 97 57-154 16-124 (142)
231 PRK08276 long-chain-fatty-acid 51.4 55 0.0012 32.0 7.4 87 200-289 10-97 (502)
232 cd01449 TST_Repeat_2 Thiosulfa 51.1 41 0.0009 25.2 5.2 41 63-103 64-104 (118)
233 PRK12406 long-chain-fatty-acid 50.9 59 0.0013 31.9 7.5 86 201-289 11-97 (509)
234 COG1022 FAA1 Long-chain acyl-C 50.2 1.9E+02 0.0041 29.4 10.7 102 35-141 186-296 (613)
235 PRK06178 acyl-CoA synthetase; 49.9 61 0.0013 32.4 7.5 86 201-289 58-144 (567)
236 PRK08043 bifunctional acyl-[ac 49.8 1.8E+02 0.0039 30.1 11.1 97 38-137 363-468 (718)
237 PRK07867 acyl-CoA synthetase; 49.4 69 0.0015 31.7 7.7 86 200-287 27-113 (529)
238 PLN00011 cysteine synthase 48.6 1.6E+02 0.0035 27.0 9.5 65 68-133 58-124 (323)
239 PRK06018 putative acyl-CoA syn 48.5 54 0.0012 32.5 6.9 84 200-286 38-122 (542)
240 PRK13382 acyl-CoA synthetase; 48.1 83 0.0018 31.2 8.1 83 201-286 68-151 (537)
241 PRK07476 eutB threonine dehydr 47.7 1.5E+02 0.0033 27.1 9.2 51 85-135 74-124 (322)
242 PRK12476 putative fatty-acid-- 47.6 1.7E+02 0.0038 29.5 10.4 103 180-288 47-155 (612)
243 PRK07008 long-chain-fatty-acid 46.7 74 0.0016 31.5 7.5 83 201-286 39-122 (539)
244 PF09269 DUF1967: Domain of un 46.5 16 0.00035 24.8 1.9 24 59-82 39-62 (69)
245 cd01519 RHOD_HSP67B2 Member of 46.4 56 0.0012 23.8 5.2 52 52-103 37-92 (106)
246 PF06543 Lac_bphage_repr: Lact 46.4 16 0.00034 22.4 1.6 22 304-325 22-43 (49)
247 PRK08633 2-acyl-glycerophospho 46.2 2.1E+02 0.0046 31.5 11.6 100 38-140 780-888 (1146)
248 PLN02556 cysteine synthase/L-3 46.1 1.7E+02 0.0037 27.5 9.3 62 71-132 103-165 (368)
249 PTZ00216 acyl-CoA synthetase; 46.0 1E+02 0.0022 31.9 8.6 90 198-290 118-208 (700)
250 TIGR03595 Obg_CgtA_exten Obg f 45.3 27 0.00059 23.7 2.9 19 65-83 45-63 (69)
251 PRK06381 threonine synthase; V 44.8 1E+02 0.0022 28.3 7.5 89 41-135 32-120 (319)
252 KOG1250 Threonine/serine dehyd 44.6 1E+02 0.0023 28.9 7.2 55 82-136 118-172 (457)
253 TIGR02275 DHB_AMP_lig 2,3-dihy 44.4 2.9E+02 0.0063 27.2 11.3 98 38-139 181-288 (527)
254 cd01561 CBS_like CBS_like: Thi 43.6 2.4E+02 0.0053 25.3 10.4 65 69-134 44-109 (291)
255 PRK06060 acyl-CoA synthetase; 43.6 90 0.002 32.3 7.8 83 201-286 30-113 (705)
256 TIGR01138 cysM cysteine syntha 43.5 2.3E+02 0.005 25.5 9.5 90 40-132 23-113 (290)
257 PRK10946 entE enterobactin syn 43.1 2.5E+02 0.0053 27.8 10.6 98 39-140 181-288 (536)
258 PRK12582 acyl-CoA synthetase; 43.0 72 0.0016 32.4 6.9 81 200-283 79-165 (624)
259 PRK11493 sseA 3-mercaptopyruva 43.0 53 0.0011 29.5 5.3 52 52-103 201-257 (281)
260 PRK08974 long-chain-fatty-acid 42.8 70 0.0015 31.8 6.7 83 201-285 48-131 (560)
261 PRK11706 TDP-4-oxo-6-deoxy-D-g 42.6 1.1E+02 0.0024 28.7 7.6 57 70-130 64-125 (375)
262 PRK06710 long-chain-fatty-acid 42.5 70 0.0015 31.9 6.7 83 201-286 49-132 (563)
263 cd01019 ZnuA Zinc binding prot 42.2 2.2E+02 0.0047 25.6 9.1 98 56-153 157-258 (286)
264 PRK07787 acyl-CoA synthetase; 42.2 3.3E+02 0.0071 26.3 11.1 97 38-139 126-231 (471)
265 COG1171 IlvA Threonine dehydra 42.1 2.3E+02 0.0049 26.4 9.0 100 38-141 38-137 (347)
266 PRK09192 acyl-CoA synthetase; 41.9 1.1E+02 0.0025 30.5 8.1 87 199-288 47-141 (579)
267 PRK10717 cysteine synthase A; 41.8 2.3E+02 0.005 26.1 9.4 90 41-133 29-119 (330)
268 TIGR01137 cysta_beta cystathio 41.6 2E+02 0.0044 27.8 9.5 89 41-132 27-116 (454)
269 PLN02723 3-mercaptopyruvate su 41.3 60 0.0013 29.8 5.4 52 52-103 238-295 (320)
270 TIGR01734 D-ala-DACP-lig D-ala 41.2 79 0.0017 30.8 6.7 82 200-284 24-106 (502)
271 cd01017 AdcA Metal binding pro 41.1 1.8E+02 0.004 26.0 8.5 76 78-153 171-250 (282)
272 PRK10252 entF enterobactin syn 41.1 2.7E+02 0.0059 31.2 11.5 99 38-139 596-704 (1296)
273 PRK09029 O-succinylbenzoic aci 40.9 93 0.002 30.0 7.1 81 200-283 27-108 (458)
274 PRK06814 acylglycerophosphoeth 40.8 3.5E+02 0.0075 29.9 12.2 99 38-139 791-898 (1140)
275 TIGR02370 pyl_corrinoid methyl 40.8 2.2E+02 0.0048 23.9 10.5 91 225-321 82-185 (197)
276 TIGR03588 PseC UDP-4-keto-6-de 40.7 3.1E+02 0.0068 25.7 10.4 63 64-129 56-126 (380)
277 PRK07786 long-chain-fatty-acid 40.6 1.1E+02 0.0024 30.3 7.7 83 201-286 42-125 (542)
278 cd02070 corrinoid_protein_B12- 40.5 2.2E+02 0.0048 23.9 8.7 87 228-316 84-178 (201)
279 PRK09545 znuA high-affinity zi 40.4 2.1E+02 0.0047 26.1 8.9 75 78-154 203-283 (311)
280 COG2236 Predicted phosphoribos 40.3 51 0.0011 27.7 4.3 34 51-84 5-38 (192)
281 PRK08180 feruloyl-CoA synthase 40.2 80 0.0017 32.0 6.7 97 180-283 52-154 (614)
282 PF02350 Epimerase_2: UDP-N-ac 40.2 2.7E+02 0.0058 25.9 9.6 95 55-154 49-152 (346)
283 TIGR02618 tyr_phenol_ly tyrosi 40.2 3.6E+02 0.0078 26.2 10.6 68 51-123 69-166 (450)
284 cd06448 L-Ser-dehyd Serine deh 40.2 1.5E+02 0.0033 27.1 7.9 91 40-133 16-106 (316)
285 PF10102 DUF2341: Domain of un 39.9 51 0.0011 23.7 3.7 41 367-408 3-57 (89)
286 PRK07868 acyl-CoA synthetase; 39.7 1.7E+02 0.0038 31.8 9.4 97 179-289 459-555 (994)
287 PRK11658 UDP-4-amino-4-deoxy-L 39.3 3.3E+02 0.0071 25.6 10.3 61 65-129 61-126 (379)
288 PRK04813 D-alanine--poly(phosp 39.2 84 0.0018 30.6 6.6 80 201-283 27-107 (503)
289 cd00640 Trp-synth-beta_II Tryp 39.2 2.6E+02 0.0056 24.3 10.6 93 40-135 15-107 (244)
290 PRK12483 threonine dehydratase 38.8 3.6E+02 0.0079 26.8 10.6 92 42-138 54-145 (521)
291 PLN02550 threonine dehydratase 38.8 4.3E+02 0.0094 26.7 12.0 91 41-136 125-215 (591)
292 PRK11761 cysM cysteine synthas 38.7 3E+02 0.0065 24.9 10.5 89 41-132 28-117 (296)
293 COG1587 HemD Uroporphyrinogen- 38.7 2E+02 0.0044 25.1 8.2 72 76-153 78-153 (248)
294 PRK10595 SOS cell division inh 38.5 1.5E+02 0.0033 24.1 6.6 53 66-118 70-125 (164)
295 PRK13237 tyrosine phenol-lyase 37.8 3.9E+02 0.0086 26.0 10.7 68 51-123 76-173 (460)
296 PRK14057 epimerase; Provisiona 37.6 2.9E+02 0.0063 24.4 8.8 64 65-131 90-163 (254)
297 PF09153 DUF1938: Domain of un 37.5 62 0.0013 22.7 3.6 32 52-87 30-62 (86)
298 PF11974 MG1: Alpha-2-macroglo 37.2 53 0.0011 24.0 3.6 35 360-394 23-60 (97)
299 COG2519 GCD14 tRNA(1-methylade 37.0 1.6E+02 0.0036 25.8 6.9 73 50-124 120-209 (256)
300 PLN02356 phosphateglycerate ki 37.0 2.8E+02 0.0061 26.7 9.2 62 69-131 95-157 (423)
301 KOG0025 Zn2+-binding dehydroge 36.9 2.3E+02 0.0049 25.7 7.8 64 73-136 157-221 (354)
302 PRK10696 tRNA 2-thiocytidine b 36.8 3E+02 0.0064 24.3 10.3 78 54-131 4-94 (258)
303 PRK06382 threonine dehydratase 36.5 2.7E+02 0.0059 26.5 9.2 92 40-136 40-131 (406)
304 TIGR03531 selenium_SpcS O-phos 36.4 4.1E+02 0.0089 25.8 10.9 44 76-122 150-200 (444)
305 PTZ00297 pantothenate kinase; 36.4 2.1E+02 0.0045 32.6 9.3 101 200-310 456-556 (1452)
306 TIGR03205 pimA dicarboxylate-- 36.3 1.2E+02 0.0025 30.1 7.1 80 201-283 46-126 (541)
307 PRK10287 thiosulfate:cyanide s 36.1 1.5E+02 0.0033 21.9 5.9 49 52-107 42-90 (104)
308 PF07210 DUF1416: Protein of u 35.2 62 0.0013 22.8 3.3 38 360-404 16-53 (85)
309 TIGR03366 HpnZ_proposed putati 35.1 3.1E+02 0.0067 24.3 9.0 60 68-131 112-172 (280)
310 cd07050 BMC_EutL_repeat2 ethan 34.9 96 0.0021 21.6 4.1 41 66-106 3-44 (87)
311 PRK15407 lipopolysaccharide bi 34.7 3.6E+02 0.0079 26.0 9.8 54 73-130 107-165 (438)
312 PF00455 DeoRC: DeoR C termina 34.2 2.1E+02 0.0046 23.1 7.0 88 248-343 15-110 (161)
313 COG4009 Uncharacterized protei 34.0 1.6E+02 0.0035 20.4 5.1 67 51-128 8-77 (88)
314 cd01562 Thr-dehyd Threonine de 33.8 2.4E+02 0.0051 25.5 8.1 57 78-135 66-122 (304)
315 PRK09162 hypoxanthine-guanine 33.1 1.3E+02 0.0029 24.9 5.8 51 50-102 14-64 (181)
316 cd01018 ZntC Metal binding pro 33.1 2.9E+02 0.0063 24.5 8.4 95 56-154 148-248 (266)
317 COG1167 ARO8 Transcriptional r 32.7 1.6E+02 0.0035 28.6 7.2 57 224-285 176-236 (459)
318 cd01448 TST_Repeat_1 Thiosulfa 32.6 1.3E+02 0.0029 22.6 5.4 40 64-103 66-106 (122)
319 cd01563 Thr-synth_1 Threonine 32.1 2.1E+02 0.0045 26.3 7.5 91 40-136 38-128 (324)
320 PRK09224 threonine dehydratase 31.9 4E+02 0.0086 26.4 9.7 92 40-136 35-126 (504)
321 cd04910 ACT_AK-Ectoine_1 ACT d 31.7 95 0.0021 21.2 3.8 51 265-330 19-69 (71)
322 PLN02409 serine--glyoxylate am 31.3 4.6E+02 0.01 24.8 11.2 99 21-131 14-114 (401)
323 PRK05638 threonine synthase; V 31.3 2E+02 0.0044 27.8 7.6 92 41-138 81-172 (442)
324 PRK08813 threonine dehydratase 31.2 4.4E+02 0.0096 24.6 9.8 83 50-137 58-140 (349)
325 cd06447 D-Ser-dehyd D-Serine d 31.2 2.6E+02 0.0055 26.8 7.9 58 80-137 136-193 (404)
326 PF00291 PALP: Pyridoxal-phosp 31.2 3.1E+02 0.0068 24.6 8.5 56 77-133 56-111 (306)
327 PRK08246 threonine dehydratase 31.0 4.1E+02 0.0089 24.2 9.5 59 76-135 67-125 (310)
328 PF06277 EutA: Ethanolamine ut 30.8 4.2E+02 0.0091 25.8 9.2 72 25-98 353-429 (473)
329 PRK10411 DNA-binding transcrip 30.4 2.1E+02 0.0045 25.0 6.8 86 250-343 91-183 (240)
330 PRK06702 O-acetylhomoserine am 30.4 5.1E+02 0.011 25.0 10.2 27 315-341 350-376 (432)
331 PRK05851 long-chain-fatty-acid 30.3 5.1E+02 0.011 25.5 10.5 90 38-130 150-251 (525)
332 PRK02261 methylaspartate mutas 30.1 2.7E+02 0.0059 21.8 8.1 46 88-133 18-63 (137)
333 cd02067 B12-binding B12 bindin 29.8 2.4E+02 0.0052 21.1 6.5 44 90-133 16-59 (119)
334 TIGR02981 phageshock_pspE phag 29.7 2.2E+02 0.0047 20.9 5.8 50 51-107 39-88 (101)
335 PRK10719 eutA reactivating fac 29.1 4.9E+02 0.011 25.4 9.3 74 25-100 354-432 (475)
336 PRK07445 O-succinylbenzoic aci 29.0 2E+02 0.0042 27.8 7.1 79 202-283 20-100 (452)
337 PF08479 POTRA_2: POTRA domain 28.9 91 0.002 21.3 3.5 26 49-74 27-52 (76)
338 PF07994 NAD_binding_5: Myo-in 28.9 4.4E+02 0.0096 23.9 9.4 71 54-126 127-227 (295)
339 COG2885 OmpA Outer membrane pr 28.8 1E+02 0.0023 25.6 4.5 59 24-83 98-160 (190)
340 KOG0830 40S ribosomal protein 28.7 3.9E+02 0.0085 23.2 8.2 87 35-133 10-98 (254)
341 KOG3212 Uncharacterized conser 28.4 79 0.0017 26.1 3.4 88 8-96 52-150 (208)
342 KOG1175 Acyl-CoA synthetase [L 28.4 3.7E+02 0.0081 27.4 8.7 100 180-285 78-178 (626)
343 PRK11823 DNA repair protein Ra 28.1 5E+02 0.011 25.2 9.6 82 73-154 76-164 (446)
344 PRK08198 threonine dehydratase 27.9 4.2E+02 0.0091 25.2 9.0 92 41-137 38-129 (404)
345 PRK08638 threonine dehydratase 27.3 4.9E+02 0.011 24.1 9.0 55 83-137 80-134 (333)
346 COG5012 Predicted cobalamin bi 27.3 3.4E+02 0.0074 23.4 7.1 84 237-322 116-206 (227)
347 PRK06721 threonine synthase; R 27.2 3.2E+02 0.0069 25.5 7.8 90 41-136 44-134 (352)
348 cd02070 corrinoid_protein_B12- 27.0 3.8E+02 0.0083 22.5 10.7 83 50-132 48-141 (201)
349 PRK07409 threonine synthase; V 26.9 3E+02 0.0065 25.7 7.6 89 41-135 47-136 (353)
350 TIGR02035 D_Ser_am_lyase D-ser 26.9 3.2E+02 0.007 26.4 7.9 61 80-140 154-214 (431)
351 TIGR01127 ilvA_1Cterm threonin 26.6 5.4E+02 0.012 24.2 10.2 92 40-136 15-106 (380)
352 PRK06145 acyl-CoA synthetase; 26.6 2.1E+02 0.0046 27.8 7.0 82 201-285 27-109 (497)
353 PF03808 Glyco_tran_WecB: Glyc 26.4 80 0.0017 25.9 3.3 74 252-331 4-78 (172)
354 TIGR01124 ilvA_2Cterm threonin 26.4 5.7E+02 0.012 25.3 9.7 91 40-135 32-122 (499)
355 COG1167 ARO8 Transcriptional r 26.2 6.1E+02 0.013 24.7 11.5 59 75-134 177-236 (459)
356 smart00450 RHOD Rhodanese Homo 26.1 2E+02 0.0044 20.0 5.3 40 64-103 43-82 (100)
357 TIGR00715 precor6x_red precorr 26.0 3.4E+02 0.0073 24.0 7.3 75 77-155 150-232 (256)
358 PRK07768 long-chain-fatty-acid 26.0 6E+02 0.013 25.0 10.2 94 38-134 150-256 (545)
359 COG1205 Distinct helicase fami 25.7 4.7E+02 0.01 28.0 9.4 111 225-338 113-233 (851)
360 KOG2882 p-Nitrophenyl phosphat 25.5 3.2E+02 0.0068 24.8 6.9 64 31-97 46-126 (306)
361 cd00754 MoaD Ubiquitin domain 25.5 1.2E+02 0.0027 20.7 3.8 49 20-85 21-76 (80)
362 TIGR02822 adh_fam_2 zinc-bindi 25.1 2.7E+02 0.0059 25.5 7.0 58 69-130 158-215 (329)
363 PF00818 Ice_nucleation: Ice n 24.9 36 0.00078 15.6 0.5 9 333-341 1-9 (16)
364 TIGR00623 sula cell division i 24.4 2.7E+02 0.0059 22.8 5.8 35 67-101 75-109 (168)
365 PRK08091 ribulose-phosphate 3- 24.3 4.7E+02 0.01 22.7 8.5 66 63-131 81-149 (228)
366 PRK09422 ethanol-active dehydr 24.3 4.8E+02 0.01 23.7 8.6 60 69-131 155-214 (338)
367 TIGR02991 ectoine_eutB ectoine 24.2 5.5E+02 0.012 23.4 9.1 53 83-135 72-124 (317)
368 PF01053 Cys_Met_Meta_PP: Cys/ 24.1 4.8E+02 0.01 24.8 8.4 84 81-165 73-162 (386)
369 PRK08197 threonine synthase; V 24.0 3.7E+02 0.0079 25.6 7.8 89 41-135 96-184 (394)
370 TIGR01501 MthylAspMutase methy 24.0 2.3E+02 0.005 22.2 5.3 95 237-338 13-119 (134)
371 TIGR03201 dearomat_had 6-hydro 23.9 3.2E+02 0.007 25.1 7.4 59 69-131 159-217 (349)
372 TIGR01747 diampropi_NH3ly diam 23.9 3.5E+02 0.0077 25.5 7.5 58 79-136 95-152 (376)
373 COG2897 SseA Rhodanese-related 23.7 1.8E+02 0.004 26.1 5.3 55 51-105 202-262 (285)
374 cd06451 AGAT_like Alanine-glyo 23.6 5.8E+02 0.013 23.4 11.8 13 199-211 195-207 (356)
375 PLN02723 3-mercaptopyruvate su 23.2 1.8E+02 0.004 26.6 5.4 47 63-109 89-137 (320)
376 PRK11493 sseA 3-mercaptopyruva 22.8 1.9E+02 0.0042 25.8 5.4 48 61-108 71-120 (281)
377 PRK02991 D-serine dehydratase; 22.7 4.2E+02 0.0092 25.7 7.9 57 81-137 160-216 (441)
378 PRK07591 threonine synthase; V 22.5 4E+02 0.0086 25.6 7.7 89 41-135 106-194 (421)
379 PRK07048 serine/threonine dehy 22.4 5.5E+02 0.012 23.5 8.4 53 82-134 76-128 (321)
380 TIGR00936 ahcY adenosylhomocys 22.4 7E+02 0.015 23.9 10.2 55 75-129 30-86 (406)
381 cd02069 methionine_synthase_B1 22.0 5E+02 0.011 22.2 9.4 92 225-320 87-186 (213)
382 PLN02238 hypoxanthine phosphor 21.8 2.5E+02 0.0055 23.4 5.5 50 51-102 10-59 (189)
383 cd01121 Sms Sms (bacterial rad 21.8 6.8E+02 0.015 23.6 9.7 82 73-154 78-166 (372)
384 PRK09629 bifunctional thiosulf 21.7 1.8E+02 0.004 29.5 5.4 42 62-103 208-249 (610)
385 PRK09177 xanthine-guanine phos 21.5 1.5E+02 0.0033 23.8 4.0 47 52-102 9-55 (156)
386 PF05221 AdoHcyase: S-adenosyl 21.3 5.4E+02 0.012 22.9 7.5 57 74-130 40-98 (268)
387 PRK05973 replicative DNA helic 21.2 3.2E+02 0.007 23.8 6.2 89 23-124 21-115 (237)
388 PRK08526 threonine dehydratase 21.2 6.1E+02 0.013 24.2 8.6 55 83-137 73-127 (403)
389 PRK14665 mnmA tRNA-specific 2- 21.1 3.5E+02 0.0076 25.4 6.8 58 74-131 2-67 (360)
390 PRK11070 ssDNA exonuclease Rec 21.1 8.7E+02 0.019 24.6 10.2 98 52-156 49-161 (575)
391 PF06564 YhjQ: YhjQ protein; 21.0 4.3E+02 0.0093 23.2 6.9 83 29-112 66-152 (243)
392 PRK08329 threonine synthase; V 20.9 5.4E+02 0.012 23.9 8.1 87 41-133 73-159 (347)
393 KOG0633 Histidinol phosphate a 20.9 1.4E+02 0.0031 26.4 3.8 68 66-133 99-169 (375)
394 KOG0330 ATP-dependent RNA heli 20.5 2.8E+02 0.0062 26.2 5.8 57 76-132 299-358 (476)
395 TIGR01203 HGPRTase hypoxanthin 20.4 3.1E+02 0.0068 22.3 5.7 20 53-72 3-22 (166)
396 cd08230 glucose_DH Glucose deh 20.4 5.7E+02 0.012 23.5 8.3 57 72-129 168-224 (355)
No 1
>KOG1176 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=100.00 E-value=1e-56 Score=426.50 Aligned_cols=369 Identities=37% Similarity=0.595 Sum_probs=312.1
Q ss_pred HhhhccCCCC-cEEEeCCC-CCeeeHHHHHHHHHHHHHHHHHcC--CCCCCEEEEEcCCchhHHHHHHHHHHhCCeEeec
Q 014952 32 FENISQFADR-PCIINGPT-GDVYTYADVELTSRKVAAGLSKLG--VQKGDVIMLLLQNCPQFVFAFLGASYIGATSTTA 107 (415)
Q Consensus 32 ~~~a~~~p~~-~a~~~~~~-~~~~Ty~el~~~~~~~a~~L~~~g--~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l 107 (415)
...+..++++ +.+++... ++.+||+|+++++.|+|..|.++| +++||+|+++++|+.+++++++||+.+|++..++
T Consensus 23 ~~~~~~~~~~~~~~i~~~~~g~~~T~~e~~~~~~r~A~~L~~~~~~i~~gDvV~i~~pNs~~~~~~~la~~~~Ga~~~~~ 102 (537)
T KOG1176|consen 23 GRPAFVYLDRNTSLVYQDSDGRELTYSELHDRCRRLASALSELGLGIKKGDVVGILAPNTPEFVELALAVPMAGAVLNPL 102 (537)
T ss_pred cccccccccCcceEEEecCCCcEEcHHHHHHHHHHHHHHHHhcCCCCCCCCEEEEEcCCCHHHHHHHHHHHHcCcccccc
Confidence 3333344444 66766532 699999999999999999999875 8999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHhcCceEEEEcccchHHHHhhhhhcCceEEEeCCCCCCccc----------hhhhhhhcccCCCCcc
Q 014952 108 NPFYTPPEIAKQAIASKAKIIITQAVYNDKVRDLSEHHGARIVTIDPPPENCLH----------FSELITQADENEIPAV 177 (415)
Q Consensus 108 ~~~~~~~~~~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~----------~~~l~~~~~~~~~~~~ 177 (415)
||.++..++...++.++++++|++....+++.+.......+++++... +.... ++.+ ........ ..
T Consensus 103 Np~~~~~ei~~~~~~s~~kiif~d~~~~~~i~~~~~~~~~~i~~l~~~-~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~ 179 (537)
T KOG1176|consen 103 NPRLTASEIAKQLKDSKPKLIFVDEDFYDKISEATSKLALKIIVLTGD-EGVISISDLVEDLDAFEDL-MPEGLPDG-IR 179 (537)
T ss_pred CcccCHHHHHHHHHhcCCeEEEEcCchHHHHHHHHhhcCCceEEEecc-cCccccccccccccchhhc-cccCCCcc-cc
Confidence 999999999999999999999999999999988776655666666543 11111 2222 11111111 45
Q ss_pred cCCCCCeEEEecCCCCCCCCceeeechHHHHHHHhhhhcCCCCCccCCCCcEEEEccchHHHHhhHHHHHHHHHcCcEEE
Q 014952 178 KINPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAIL 257 (415)
Q Consensus 178 ~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~l~~l~~G~~~v 257 (415)
+...++++.|.|||||||.||||++||++++.+...... ...+...++.++.+|++|.+|+...++..+..|++++
T Consensus 180 ~~~~dd~~~il~SSGTTg~PKgV~lsHr~~~~~~~~~~~----~~~~~~~~v~l~~lPl~H~~Gl~~~~~~~~~~~~~ii 255 (537)
T KOG1176|consen 180 PVSEDDTAAILYSSGTTGLPKGVVLSHRNLIANTLSIKI----GWELTSDDVYLCTLPLFHIYGLITLLLSLLAGGTTII 255 (537)
T ss_pred cCCCCCeEEEecCCCCCCCCceEEEecHHHHHHHHHhhh----cccCCCCceEEEechHHHHhHHHHHHHHHHhCCceEE
Confidence 566799999999999999999999999999988776655 3346678999999999999999975555777777777
Q ss_pred EcCCCCHHHHHHHHHhcCceeeecchHHHHHHHcCCCCCCCCcccceeeeecCCCCCHHHHHHHHhhCCCCccccccccc
Q 014952 258 IMQKFDIVKLMELVQKYKVTVAPFVPPIVLAVAKSGDVDKYDMSSIRTVMSGAAPMGKELEDAVRAKLPHAKLGQGYGMT 337 (415)
Q Consensus 258 ~~~~~~~~~~~~~l~~~~~t~l~~~p~~l~~l~~~~~~~~~~l~~lr~v~~gG~~l~~~~~~~~~~~~~~~~~~~~YG~t 337 (415)
....+++..+++.+++|++|++.++|.++..|++.+.....+|+++|.+.+||+++++++.+++++++|...+.+.||+|
T Consensus 256 ~~~~f~~~~~~~~i~kykvt~~~~vP~~~~~l~~~p~~~~~~l~sl~~v~~gga~~~~~~~~~~~~~l~~~~v~q~YGmT 335 (537)
T KOG1176|consen 256 CLRKFDAELFLDLIEKYKVTHLFLVPPVLNMLAKSPIVKKYDLSSLRSVLSGGAPLSPATLEKVKERLPNVTVIQGYGMT 335 (537)
T ss_pred ECCCCCHHHHHHHHHHhCEEEEEcChHHHHHHhcCCccCcccCCccEEEEecCCCCCHHHHHHHHHhCCCceEEEeeccc
Confidence 77888999999999999999999999999999999877889999999999999999999999999999779999999999
Q ss_pred cCCccccccccccCCccccCCCcccccccCCeEEEEeCCCCCCCCCCCceeEEEecCccccccccCCcceeeeee
Q 014952 338 EAGPVLSMCLAFAKEPFEIKSGACGTVVRNAEMKIVDPDTGISLPRNQAGEICIRGAQIMKGTYHIYAPFLLSIV 412 (415)
Q Consensus 338 E~~~~~~~~~~~~~~~~~~~~~~~G~p~~~~~v~i~d~~~~~~~~~g~~Gel~v~~~~~~~gY~~~~~~~~~~~~ 412 (415)
|+++.++.+.. .+. .+++++|+++++++++|.+ ++|+.+++++.||||++|+.++.|||+||++|+.+|=
T Consensus 336 E~~~~~~~~~~---~~e-~k~~svG~~~~g~~~~v~~-e~g~~l~~~~~GEI~vrg~~imkGY~~NpeaT~~~~~ 405 (537)
T KOG1176|consen 336 EAGGLITSNDW---GPE-RKPGSVGRLLPGVRVKVLD-ETGVSLGPNQTGEICVRGPQVMKGYLKNPEATKEAFD 405 (537)
T ss_pred cccCceeecCC---Ccc-CcccccCccccceEEEeeC-CCCCCCCCCCceEEEEECcccchhhcCChHHHHhhcc
Confidence 99988877631 111 5789999999988888888 8899999999999999999999999999999987764
No 2
>PLN02246 4-coumarate--CoA ligase
Probab=100.00 E-value=9e-56 Score=436.49 Aligned_cols=401 Identities=77% Similarity=1.231 Sum_probs=343.3
Q ss_pred ceeecCCCCCCCCCCCCHHhHHHhhhccCCCCcEEEeCCCCCeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchh
Q 014952 10 FIFRSKLPDIYIPNHLPLHTYCFENISQFADRPCIINGPTGDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQ 89 (415)
Q Consensus 10 ~~~~~~~~~~~~~~~~tl~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~ 89 (415)
.+++.+++....++.+|+.+.+.++++++|+++|+++.++++++||.||.++++++|+.|.++|+++||+|+++++|+.+
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~a~~~~~~~~~~ty~el~~~~~~la~~L~~~g~~~gd~V~i~~~~~~~ 87 (537)
T PLN02246 8 FIFRSKLPDIYIPNHLPLHDYCFERLSEFSDRPCLIDGATGRVYTYADVELLSRRVAAGLHKLGIRQGDVVMLLLPNCPE 87 (537)
T ss_pred eEecCCCCCCCCCCCCcHHHHHHHHHHhCCCCeEEEecCCCceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCChH
Confidence 67888899999899999999999999999999999987556899999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhCCeEeecCCCCCHHHHHHHHHhcCceEEEEcccchHHHHhhhhhcCceEEEeCCCCCCccchhhhhhhc
Q 014952 90 FVFAFLGASYIGATSTTANPFYTPPEIAKQAIASKAKIIITQAVYNDKVRDLSEHHGARIVTIDPPPENCLHFSELITQA 169 (415)
Q Consensus 90 ~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~~~ 169 (415)
++++++||+++|++++|++|.++.+++..+++.+++++++++....+.+..........++.++........+.++. ..
T Consensus 88 ~~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~ 166 (537)
T PLN02246 88 FVLAFLGASRRGAVTTTANPFYTPAEIAKQAKASGAKLIITQSCYVDKLKGLAEDDGVTVVTIDDPPEGCLHFSELT-QA 166 (537)
T ss_pred HHHHHHHHHHcCEEEecCCCCCCHHHHHHHHHhcCCcEEEEccchHHHHHHHhhcCCceEEEeCCCCCCceeHHHHh-cC
Confidence 99999999999999999999999999999999999999999988777665554333456666765444444455542 22
Q ss_pred ccCCCCcccCCCCCeEEEecCCCCCCCCceeeechHHHHHHHhhhhcCCCCCccCCCCcEEEEccchHHHHhhHHHHHHH
Q 014952 170 DENEIPAVKINPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCA 249 (415)
Q Consensus 170 ~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~l~~ 249 (415)
.....+.....++++++++|||||||.||+|.++|+++..............+.+.++++++...|++|.+++...++.+
T Consensus 167 ~~~~~~~~~~~~~~~~~i~~TSGtTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~~~~~~~~~~~~~ 246 (537)
T PLN02246 167 DENELPEVEISPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYFHSDDVILCVLPMFHIYSLNSVLLCG 246 (537)
T ss_pred CCCCCCCCCCCccCEEEEEeCCCCCCCCceEEEeHHHHHHHHHHHhhccccccCCCCCcEEEEeechHHHHHHHHHHHHH
Confidence 22223334456789999999999999999999999999987766544332245678999999999999999987667889
Q ss_pred HHcCcEEEEcCCCCHHHHHHHHHhcCceeeecchHHHHHHHcCCCCCCCCcccceeeeecCCCCCHHHHHHHHhhCCCCc
Q 014952 250 LRVGAAILIMQKFDIVKLMELVQKYKVTVAPFVPPIVLAVAKSGDVDKYDMSSIRTVMSGAAPMGKELEDAVRAKLPHAK 329 (415)
Q Consensus 250 l~~G~~~v~~~~~~~~~~~~~l~~~~~t~l~~~p~~l~~l~~~~~~~~~~l~~lr~v~~gG~~l~~~~~~~~~~~~~~~~ 329 (415)
+..|+++++.+.+++..+++.++++++|++.++|.++..|++........++++|.+++||+++++++.+.+.+.|++..
T Consensus 247 l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~lr~~~~gg~~l~~~~~~~~~~~~~~~~ 326 (537)
T PLN02246 247 LRVGAAILIMPKFEIGALLELIQRHKVTIAPFVPPIVLAIAKSPVVEKYDLSSIRMVLSGAAPLGKELEDAFRAKLPNAV 326 (537)
T ss_pred HhcCCEEEEeCCCCHHHHHHHHHHhCceEEEcchHHHHHHhcCccccccCccceeEEEEecCcCCHHHHHHHHHHcCCCe
Confidence 99999999999999999999999999999999999999998876666667899999999999999999999999998889
Q ss_pred cccccccccCCccccccccccCCccccCCCcccccccCCeEEEEeCCCCCCCCCCCceeEEEecCccccccccCCcceee
Q 014952 330 LGQGYGMTEAGPVLSMCLAFAKEPFEIKSGACGTVVRNAEMKIVDPDTGISLPRNQAGEICIRGAQIMKGTYHIYAPFLL 409 (415)
Q Consensus 330 ~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~G~p~~~~~v~i~d~~~~~~~~~g~~Gel~v~~~~~~~gY~~~~~~~~~ 409 (415)
+++.||+||++.+++.+...........++++|+|+++++++|+|++++++++.|+.|||+++|+.++.||+++|+.+..
T Consensus 327 ~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~g~~~~~GY~~~~~~~~~ 406 (537)
T PLN02246 327 LGQGYGMTEAGPVLAMCLAFAKEPFPVKSGSCGTVVRNAELKIVDPETGASLPRNQPGEICIRGPQIMKGYLNDPEATAN 406 (537)
T ss_pred EeccccccccCcccccccccCCCCccccCCccccccCCcEEEEecCCCCCcCCCCCceEEEEECCchhccccCCchhhhh
Confidence 99999999998765543221222233456789999999999999988899999999999999999999999999998877
Q ss_pred ee
Q 014952 410 SI 411 (415)
Q Consensus 410 ~~ 411 (415)
.|
T Consensus 407 ~~ 408 (537)
T PLN02246 407 TI 408 (537)
T ss_pred cc
Confidence 65
No 3
>COG0318 CaiC Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=2.6e-56 Score=437.28 Aligned_cols=382 Identities=34% Similarity=0.532 Sum_probs=320.6
Q ss_pred CCCCCHHhHHHhhhccCCCCcEEEeCCCCCeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHHhC
Q 014952 22 PNHLPLHTYCFENISQFADRPCIINGPTGDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIG 101 (415)
Q Consensus 22 ~~~~tl~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G 101 (415)
....++.+.+.++++.+|+++++++.+...++||+||.++++++|+.|++.|+++||+|+|+++|++++++++|||+++|
T Consensus 8 ~~~~~~~~~l~~~a~~~~~~~a~~~~~~~~~~Ty~el~~~~~~~A~~L~~~~v~~gdrVail~~N~~e~~~~~~a~~~~G 87 (534)
T COG0318 8 TAELTLASLLERAARRNPDRPALIFLGRGGRLTYRELDRRANRLAAALQALGVKPGDRVAILLPNSPEFLIAFLAALRAG 87 (534)
T ss_pred cccccHHHHHHHHHHhCCCceEEEEcCCCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHhcC
Confidence 34689999999999999999999998433359999999999999999999999999999999999999999999999999
Q ss_pred CeEeecCCCCCHHHHHHHHHhcCceEEEEcccchHHHHhhhhhcC-ceEEEeCCCCCCc--cchhhhhhhcccCCCCccc
Q 014952 102 ATSTTANPFYTPPEIAKQAIASKAKIIITQAVYNDKVRDLSEHHG-ARIVTIDPPPENC--LHFSELITQADENEIPAVK 178 (415)
Q Consensus 102 ~~~v~l~~~~~~~~~~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~-~~~i~~~~~~~~~--~~~~~l~~~~~~~~~~~~~ 178 (415)
++++|+||.+...++.+.+++++++.++++.+..+.......... ...+......... ..++++.............
T Consensus 88 av~vpln~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (534)
T COG0318 88 AVAVPLNPRLTPRELAYILNDAGAKVLITSAEFAALLEAVAEALPVVLVVLLVGDADDRLPITLEALAAEGPGPDADARP 167 (534)
T ss_pred EEEeecCcccCHHHHHHHHHhcCCeEEEEcccchhHHHHHhccCCcceEEEecccccccccccHHHHhhccCCcccccCC
Confidence 999999999999999999999999999999885555555543322 2222222211111 2455552222222222233
Q ss_pred CCCCCeEEEecCCCCCCCCceeeechHHHHHHHhhhhcCCCCCcc--CCCCcEEEEccchHHHHhhHHHHHHHHHcCcEE
Q 014952 179 INPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLY--LHKEDVILCVLPLFHIYSLNSVLLCALRVGAAI 256 (415)
Q Consensus 179 ~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~--~~~~~~~~~~~pl~~~~g~~~~~l~~l~~G~~~ 256 (415)
..++++++|+|||||||.||+|++||+++..+...... .+. +++.|++++++|++|.+|+...++..+..|+++
T Consensus 168 ~~~~d~a~i~yTSGTTG~PKgv~~th~~~~~~~~~~~~----~~~~~~~~~d~~l~~lPl~H~~Gl~~~~~~~~~~G~~~ 243 (534)
T COG0318 168 VDPDDLAFLLYTSGTTGLPKGVVLTHRNLLANAAGIAA----ALGGGLTPDDVVLSWLPLFHIFGLIVGLLAPLLGGGTL 243 (534)
T ss_pred CCCCCEEEEEeCCCCCCCCCEeEEecHhHHHHHHHHHH----HhcccCCCCceEEEecChHHHHHHHHHHHHHHHcCCEE
Confidence 67899999999999999999999999999988877776 344 788999999999999999997777779999999
Q ss_pred EEcC--CCCHHHHHHHHHhcCceeeecchHHHHHHHcCCCCCCCCccc-ceeeeecCCCCCHHHHHHHHhhCCCCccccc
Q 014952 257 LIMQ--KFDIVKLMELVQKYKVTVAPFVPPIVLAVAKSGDVDKYDMSS-IRTVMSGAAPMGKELEDAVRAKLPHAKLGQG 333 (415)
Q Consensus 257 v~~~--~~~~~~~~~~l~~~~~t~l~~~p~~l~~l~~~~~~~~~~l~~-lr~v~~gG~~l~~~~~~~~~~~~~~~~~~~~ 333 (415)
++.+ .+++..++..+.++++|++.++|.++..+++.+.....++.+ +|.+++||+++++++.+++++.|+...+.+.
T Consensus 244 v~~~~~~f~~~~~~~~i~~~~~t~~~~vPt~~~~ll~~~~~~~~~~~~~lr~~~~gg~~~~~~~~~~~~~~~~~~~i~~~ 323 (534)
T COG0318 244 VLLSPEPFDPEEVLWLIEKYKVTVLSGVPTFLRELLDNPEKDDDDLSSSLRLVLSGGAPLPPELLERFEERFGPIAILEG 323 (534)
T ss_pred EeCCCCCcCHHHHHHHHHHhcceEEecchHHHHHHHhCCccCccccccceEEEEecCCcCCHHHHHHHHHHhCCCceEEe
Confidence 9998 599999999999999999999999999999998877766676 9999999999999999999999955689999
Q ss_pred cccccCCccccccccccCCccccCCCcccccccCCeEEEEeCCCCCCCCCCCceeEEEecCccccccccCCcceeeee
Q 014952 334 YGMTEAGPVLSMCLAFAKEPFEIKSGACGTVVRNAEMKIVDPDTGISLPRNQAGEICIRGAQIMKGTYHIYAPFLLSI 411 (415)
Q Consensus 334 YG~tE~~~~~~~~~~~~~~~~~~~~~~~G~p~~~~~v~i~d~~~~~~~~~g~~Gel~v~~~~~~~gY~~~~~~~~~~~ 411 (415)
||+||++++++.+.... . ....+++|+|+|+++++|+|+++++++| |+.|||+|+||+++.|||++|++|..+|
T Consensus 324 YG~TE~~~~~~~~~~~~-~--~~~~~~~G~~~pg~~v~Ivd~~~~~~~p-g~vGei~irgp~v~~GY~~~pe~t~~~f 397 (534)
T COG0318 324 YGLTETSPVVTINPPDD-L--LAKPGSVGRPLPGVEVRIVDPDGGEVLP-GEVGEIWVRGPNVMKGYWNRPEATAEAF 397 (534)
T ss_pred ecccccCceeecCCCch-h--hhcCCcccccCCCcEEEEEeCCCCccCC-CCceEEEEECchhhhhhcCChHHHHHhh
Confidence 99999997766652111 0 2466778999999999999988776667 9999999999999999999999998865
No 4
>KOG1177 consensus Long chain fatty acid acyl-CoA ligase [Lipid transport and metabolism]
Probab=100.00 E-value=1.7e-56 Score=397.84 Aligned_cols=380 Identities=23% Similarity=0.352 Sum_probs=329.8
Q ss_pred CCCHHhHHHhhhccCCCCcEEEeCCCCCeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHHhCCe
Q 014952 24 HLPLHTYCFENISQFADRPCIINGPTGDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGAT 103 (415)
Q Consensus 24 ~~tl~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~ 103 (415)
+.|+++.+.-.+++.||+.+++....+.++||+|+.+.++++|++|.++|+++||+|++..+|+.+|+.+++||+++|.+
T Consensus 49 ~~Tigq~l~~~t~~v~dkea~Vf~~eg~R~Tf~~~~~ev~slAaGll~lGL~kGDrVgvwgpN~~~w~l~~lA~A~AG~v 128 (596)
T KOG1177|consen 49 SETIGQLLETTTERVPDKEAAVFDHEGIRLTFSEFVSEVESLAAGLLSLGLKKGDRVGVWGPNSYEWVLCQLACARAGLV 128 (596)
T ss_pred cccHHHHHHHHhhccCcceEEEEeeccchhhHHHHHHHHHHHHhhHHhhcCCCCCEEEEecCChHHHHHHHHHHHHhceE
Confidence 68999999999999999999998877788999999999999999999999999999999999999999999999999999
Q ss_pred EeecCCCCCHHHHHHHHHhcCceEEEEcccc-----hHHHHhhhhh--------------cCce-EEEeC--CCCCCccc
Q 014952 104 STTANPFYTPPEIAKQAIASKAKIIITQAVY-----NDKVRDLSEH--------------HGAR-IVTID--PPPENCLH 161 (415)
Q Consensus 104 ~v~l~~~~~~~~~~~~l~~~~~~~vl~~~~~-----~~~~~~~~~~--------------~~~~-~i~~~--~~~~~~~~ 161 (415)
.+++||.+..++++..+.+.++.++|..+.. .+.+.++..+ ...+ +|..+ ....+.+.
T Consensus 129 ~v~~NP~Yq~~elr~~L~k~~~k~l~~p~~~k~~ny~~~l~~icPEv~~~~~G~lkS~~lp~lthvi~~~ed~~~~Ga~~ 208 (596)
T KOG1177|consen 129 LVNLNPAYQSEELRYVLKKVGCKALFAPPQFKTQNYYETLLEICPEVMRGDPGQLKSELLPELTHVILADEDHPLPGAFL 208 (596)
T ss_pred EeccCcccccHHHHHHHhhcCeEEEEccchhhhchHHHHHHHhhHHhhcCCCccccccccccceEEEecCCCCcCCCcee
Confidence 9999999999999999999999999987543 2333333221 0122 23333 34567788
Q ss_pred hhhhhhhcccCCCC-----cccCCCCCeEEEecCCCCCCCCceeeechHHHHHHHhhhhcCCCCCccCCCCcEEEEccch
Q 014952 162 FSELITQADENEIP-----AVKINPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPL 236 (415)
Q Consensus 162 ~~~l~~~~~~~~~~-----~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pl 236 (415)
++|++......... .....||+.+-|.|||||||.|||+.+||.+++++...... .++++..+++++..|+
T Consensus 209 ~sev~~~~s~~~~a~l~~~~k~~~pdd~~niQFTSGTTG~PKgatLsH~~~~Nna~~vg~----r~g~~e~~~i~~~~Pl 284 (596)
T KOG1177|consen 209 LSEVLKAASKEERAKLADMSKWLSPDDAVNIQFTSGTTGAPKGATLSHYNFLNNARAVGA----RAGYNEKHRICIPNPL 284 (596)
T ss_pred hHHHHHhcchHHHHHHHhhhhhcCCCCceEEEeccCCCCCCcceeeehhhhhhhHHHHHH----HhCcCcceEEEecCch
Confidence 88886655443322 34567899999999999999999999999999998887776 6678888899999999
Q ss_pred HHHHhhHHHHHHHHHcCcEEEEcC-CCCHHHHHHHHHhcCceeeecchHHHHHHHcCCCCCCCCcccceeeeecCCCCCH
Q 014952 237 FHIYSLNSVLLCALRVGAAILIMQ-KFDIVKLMELVQKYKVTVAPFVPPIVLAVAKSGDVDKYDMSSIRTVMSGAAPMGK 315 (415)
Q Consensus 237 ~~~~g~~~~~l~~l~~G~~~v~~~-~~~~~~~~~~l~~~~~t~l~~~p~~l~~l~~~~~~~~~~l~~lr~v~~gG~~l~~ 315 (415)
+|.+|...+.++++..|+++|+++ .|++...++++.++++|.++++|.++..|++.+.....+++++|..+.||+++++
T Consensus 285 ~H~~G~~~~~ma~l~~gat~Vfp~~~f~~k~alqai~~ekcT~l~gtPtM~~Dlln~~~~~~~~~s~lr~~vigGa~~s~ 364 (596)
T KOG1177|consen 285 YHCFGCVLGVMAALMHGATIVFPAPSFDPKDALQAISNEKCTTLYGTPTMFVDLLNIPQKQQVDLSSLRKGVIGGAPVSP 364 (596)
T ss_pred HHHHHHHHHHHHHHHhCcEEEeeCCCCChHHHHHHHHhhceEEEecChHHHHHHhcchhhccCchhhhhhheeCCCCCCH
Confidence 999998889999999999999975 5999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhCCCCccccccccccCCccccccccccCCccccCCCcccccccCCeEEEEeCCCCCCCCCCCceeEEEecCc
Q 014952 316 ELEDAVRAKLPHAKLGQGYGMTEAGPVLSMCLAFAKEPFEIKSGACGTVVRNAEMKIVDPDTGISLPRNQAGEICIRGAQ 395 (415)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~G~p~~~~~v~i~d~~~~~~~~~g~~Gel~v~~~~ 395 (415)
++.+++.....=..+...||+||++...++.. ...+......++|+.+++.+.+|+| +.|..++.|..||||++|++
T Consensus 365 eLlk~iv~~~~m~~i~v~YG~TEts~v~~~~~--~~D~~~~~~ksVG~~m~h~Ea~iv~-~~g~~v~~~~~Gel~iRGY~ 441 (596)
T KOG1177|consen 365 ELLKLIVNQMNMKDIAVAYGLTETSPVLFMSL--LGDPPEERIKSVGHLMDHYEAAIVD-KDGSEVPLGTKGELLIRGYS 441 (596)
T ss_pred HHHHHHHHhhCceeeEEEeeccccCcceeeec--CCCCHHHHHhhhhhccccccccccc-CCCCccccCCCceEEEEech
Confidence 99999999763234778999999997665542 3334456678999999999999999 76999999999999999999
Q ss_pred cccccccCCcceeee
Q 014952 396 IMKGTYHIYAPFLLS 410 (415)
Q Consensus 396 ~~~gY~~~~~~~~~~ 410 (415)
++.|||++++.|.++
T Consensus 442 tMl~Ywg~~~kT~et 456 (596)
T KOG1177|consen 442 TMLGYWGEEEKTKET 456 (596)
T ss_pred hheeecCCcccchhh
Confidence 999999999988764
No 5
>COG0365 Acs Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases [Lipid metabolism]
Probab=100.00 E-value=1.4e-55 Score=416.53 Aligned_cols=378 Identities=23% Similarity=0.311 Sum_probs=314.5
Q ss_pred CCCCCCCCHHhH-HHhhhc-cCCCCcEEEeCCCC---CeeeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEcCCchhHHH
Q 014952 19 IYIPNHLPLHTY-CFENIS-QFADRPCIINGPTG---DVYTYADVELTSRKVAAGLSK-LGVQKGDVIMLLLQNCPQFVF 92 (415)
Q Consensus 19 ~~~~~~~tl~~~-l~~~a~-~~p~~~a~~~~~~~---~~~Ty~el~~~~~~~a~~L~~-~g~~~g~~V~i~~~~~~~~~~ 92 (415)
|..+..+|+... ++++.. ..+++.|++..++. +.+||+||.+.++++|+.|++ .|+ +||+|++++|+.++.++
T Consensus 2 wf~~~~lN~~~n~~dr~~~~~~~~~~aii~~~e~~~~~~~Ty~~L~~~v~r~A~~L~~~~gv-kGDrV~iymp~~pe~~~ 80 (528)
T COG0365 2 WFEGGTLNLALNALDRHLEADRPDDTAIIFDGEDGLFRELTYGDLRREVARLANALKDLGGV-KGDRVAIYMPNSPEAVI 80 (528)
T ss_pred CcCCceeechhhhhhhhhhccCCCceEEEEEcCCCCceEEEHHHHHHHHHHHHHHHHHhCCC-CCCEEEEEcCCCHHHHH
Confidence 445556777555 444443 34789999877432 789999999999999999997 568 99999999999999999
Q ss_pred HHHHHHHhCCeEeecCCCCCHHHHHHHHHhcCceEEEEcccchHHHHhhhhhc--C---ceEEEeCCCCCCccchhhhhh
Q 014952 93 AFLGASYIGATSTTANPFYTPPEIAKQAIASKAKIIITQAVYNDKVRDLSEHH--G---ARIVTIDPPPENCLHFSELIT 167 (415)
Q Consensus 93 ~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~vl~~~~~~~~~~~~~~~~--~---~~~i~~~~~~~~~~~~~~l~~ 167 (415)
++|||+++|++.+|+.+.++.+.+..++++++++++|+.+......+...... . ..++.++... ..++++ .
T Consensus 81 a~LA~~riGAI~~~vf~~f~~~al~~Ri~d~~~k~vit~d~~~~~gk~~~~~~~~~~~~~~~iv~~r~~---~~~~~~-~ 156 (528)
T COG0365 81 ALLATARIGAIPAVVSPGLSAEAVADRIADLGPKVLIADDGTFRNGKEIALLEDADAVLSSVVVVPRLG---LWYDEA-V 156 (528)
T ss_pred HHHHHHHcCCEEeecccCCCHHHHHHHHHccCCCEEEEecccccccccccchhHHHHhhcceEEecccc---ccHHHH-h
Confidence 99999999999999999999999999999999999999877655333221100 0 1133333322 667776 4
Q ss_pred hcccCCCCcccCCCCCeEEEecCCCCCCCCceeeechHHHHHHHhhhhcCCCCCccCCCCcEEEEccchHHHHhhHHHHH
Q 014952 168 QADENEIPAVKINPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLL 247 (415)
Q Consensus 168 ~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~l 247 (415)
.......+..+...+++++|+|||||||+||+|+++|.++.......... .+.+.++|++++..++.|+.|.++.++
T Consensus 157 ~~~~~~~~~~~~~~~dpl~ilYTSGTTG~PKgv~H~~gg~l~~~~~~~~~---~~~~~~~Dv~w~~ad~GW~~g~~~~v~ 233 (528)
T COG0365 157 EKASEKFEFEPLPADDPLFLLYTSGTTGKPKGIVHSHGGYLVEHRLTAKF---HGDLLPGDRFWNSSDPGWIYGLWYSVF 233 (528)
T ss_pred hccCCCCCccccCCCCeEEEEeCCCCCCCCceEEEeCchHHHHHHHHHHH---hhCCCCCCEEEeCCCchhhhCchHHHH
Confidence 44444555566899999999999999999999999999887766555543 335669999999999999999999999
Q ss_pred HHHHcCcEEEEcCC--C-CHHHHHHHHHhcCceeeecchHHHHHHHcCCCCCCCCcccceeeeecCCCCCHHHHHHHHhh
Q 014952 248 CALRVGAAILIMQK--F-DIVKLMELVQKYKVTVAPFVPPIVLAVAKSGDVDKYDMSSIRTVMSGAAPMGKELEDAVRAK 324 (415)
Q Consensus 248 ~~l~~G~~~v~~~~--~-~~~~~~~~l~~~~~t~l~~~p~~l~~l~~~~~~~~~~l~~lr~v~~gG~~l~~~~~~~~~~~ 324 (415)
.++..|++.++.+. + ++..+++.++++++|.+++.|..++.|.+....+..+|++||.+.+.|||++++..+++.+.
T Consensus 234 ~pL~~Gat~~~~eg~p~~~~~~~~~~ie~~~vt~~~tsPT~~R~l~~~g~~~~~dlssLr~~~SaGEPLnpe~~~w~~~~ 313 (528)
T COG0365 234 SPLASGATTVLYDGRPFYSPERLWEALEKYKVTIFGTSPTFLRRLMKLGLGEPYDLSSLRVLGSAGEPLNPEAFEWFYSA 313 (528)
T ss_pred HHHhcCCeEEEeCCCCCCCHHHHHHHHHHhCCceEeeCHHHHHHHHhcCCcccccchhheeeeccCCCCCHHHHHHHHHH
Confidence 99999999998853 3 49999999999999999999999999999887777899999999999999999999999999
Q ss_pred CCCCccccccccccCCccccccccccCCccccCCCcccccccCCeEEEEeCCCCCCCCCCCceeEEEecC--cccccccc
Q 014952 325 LPHAKLGQGYGMTEAGPVLSMCLAFAKEPFEIKSGACGTVVRNAEMKIVDPDTGISLPRNQAGEICIRGA--QIMKGTYH 402 (415)
Q Consensus 325 ~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~G~p~~~~~v~i~d~~~~~~~~~g~~Gel~v~~~--~~~~gY~~ 402 (415)
+ ++++.+.||+||++++.... .+ ...+++.|+|+||++++|+|++ |+++++|+ |+|+++.| .++++||+
T Consensus 314 ~-g~~i~d~~gqTEtg~~~~~~-----~~-~~~~g~~g~p~pG~~~~vvdd~-g~~~~~~~-G~Lvi~~~~p~~~~~~w~ 384 (528)
T COG0365 314 L-GVWILDIYGQTETGMGFIAG-----RP-PVKNGSSGLPLPGYAVRRVDDE-GNPVPPGV-GELVVRLPWPGMALTYWN 384 (528)
T ss_pred h-CCCEeccccccccCccccCC-----CC-CcCCCCCCCCCCCceeEEECCC-CCcCCCCc-eEEEEeCCCchhhhhhhC
Confidence 9 79999999999999544433 12 3456666999999999999966 99999999 99999987 99999999
Q ss_pred CCcceeeeeee
Q 014952 403 IYAPFLLSIVC 413 (415)
Q Consensus 403 ~~~~~~~~~~~ 413 (415)
||+.++++|+-
T Consensus 385 d~er~~~~y~~ 395 (528)
T COG0365 385 DPERYKEAYFG 395 (528)
T ss_pred CHHHHHHHHhh
Confidence 99999998864
No 6
>PTZ00342 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=8.6e-55 Score=436.14 Aligned_cols=380 Identities=17% Similarity=0.233 Sum_probs=304.1
Q ss_pred CCCCHHhHHHhhhccCCCCcEEEeCCCC---CeeeHHHHHHHHHHHHHHHHHc---CCCCC-----------CEEEEEcC
Q 014952 23 NHLPLHTYCFENISQFADRPCIINGPTG---DVYTYADVELTSRKVAAGLSKL---GVQKG-----------DVIMLLLQ 85 (415)
Q Consensus 23 ~~~tl~~~l~~~a~~~p~~~a~~~~~~~---~~~Ty~el~~~~~~~a~~L~~~---g~~~g-----------~~V~i~~~ 85 (415)
.-.|+.++|.++++++|+++|+++...+ +.+||+|+.++++++|++|.++ |+++| |+|+|+++
T Consensus 59 ~~~~l~~~l~~~~~~~p~~~Al~~~~~g~~~~~~Ty~el~~~v~~~A~~L~~~~~~Gv~~g~~~~~~~~g~~d~V~i~~~ 138 (746)
T PTZ00342 59 VYKHIMKLLLEKYKLNNNKIAIVEHSCGEPQNYITYGNFFKKVLSFSHSLNTYEGKGIPEKKYNEEQNNGKFKLLGLYGS 138 (746)
T ss_pred ccchHHHHHHHHHhhcCCceeEeccCCCCCceeeeHHHHHHHHHHHHHHHHHHhhcCCCcCccccccccccccEEEEEcC
Confidence 3579999999999999999999974323 6899999999999999999974 99998 99999999
Q ss_pred CchhHHHHHHHHHHhCCeEeecCCCCCHHHHHHHHHhcCceEEEEcccchHHHHhhhhhcC-c-eEEEeCCCCCC-----
Q 014952 86 NCPQFVFAFLGASYIGATSTTANPFYTPPEIAKQAIASKAKIIITQAVYNDKVRDLSEHHG-A-RIVTIDPPPEN----- 158 (415)
Q Consensus 86 ~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~-~-~~i~~~~~~~~----- 158 (415)
|+++|+++.+||+++|++.||+++.++.+++.++++++++++++++.+..+.+.......+ + +++.++.....
T Consensus 139 N~~ew~~~~lA~~~~Gav~Vpl~~~~~~~el~~il~~s~~~~lv~~~~~~~~l~~~~~~~~~l~~ii~~~~~~~~~~~~~ 218 (746)
T PTZ00342 139 NSINWLVADLACMLSGVTTLVMHSKFSIDVIVDILNETKLEWLCLDLDLVEGLLERKNELPHLKKLIILDTLIKSKEINI 218 (746)
T ss_pred CCHHHHHHHHHHHHcCCeEEEecCCCCHHHHHHHHhcCCCCEEEEcHHHHHHHHHhhccCCCceEEEEECCCCccccccc
Confidence 9999999999999999999999999999999999999999999998877777665543322 3 45665532100
Q ss_pred ---------------c-------------------------------cchhhhhh----------------hcccCCCCc
Q 014952 159 ---------------C-------------------------------LHFSELIT----------------QADENEIPA 176 (415)
Q Consensus 159 ---------------~-------------------------------~~~~~l~~----------------~~~~~~~~~ 176 (415)
. ..++++.. .......+.
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (746)
T PTZ00342 219 NKEEKNNGSNVNNNGNKNNKEEQKGNDLSNELEDISLGPLEYDKEKLEKIKDLKEKAKKLGISIILFDDMTKNKTTNYKI 298 (746)
T ss_pred ccccccccccccccccccccccccccccccccccccccccccchhhhhhhHHHHHHhhcCCCEEEEHHHHHhhcccCCCC
Confidence 0 01111110 000111122
Q ss_pred ccCCCCCeEEEecCCCCCCCCceeeechHHHHHHHhhhhcCCCCCccCCCCcEEEEccchHHHHhhHHHHHHHHHcCcEE
Q 014952 177 VKINPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAI 256 (415)
Q Consensus 177 ~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~l~~l~~G~~~ 256 (415)
....++++++|+|||||||.||||++||+++++.+....... .....+.+++++++|++|++++. ..+.++..|+++
T Consensus 299 ~~~~~dd~a~IiYTSGTTG~PKGVmlTH~nl~~~~~~~~~~~--~~~~~~~d~~ls~LPL~Hi~~~~-~~~~~l~~G~~i 375 (746)
T PTZ00342 299 QNEDPDFITSIVYTSGTSGKPKGVMLSNKNLYNTVVPLCKHS--IFKKYNPKTHLSYLPISHIYERV-IAYLSFMLGGTI 375 (746)
T ss_pred CCCCccceEEEEEcCCCCCCCCEEEEccHHHHHHHHHHhhcc--cccCCCCCeEEEeCcHHHHHHHH-HHHHHHHcCCEE
Confidence 345678999999999999999999999999998876554311 11123458999999999999997 467789999999
Q ss_pred EEcCCCCHHHHHHHHHhcCceeeecchHHHHHHHcC--------CCCCC-------------------------------
Q 014952 257 LIMQKFDIVKLMELVQKYKVTVAPFVPPIVLAVAKS--------GDVDK------------------------------- 297 (415)
Q Consensus 257 v~~~~~~~~~~~~~l~~~~~t~l~~~p~~l~~l~~~--------~~~~~------------------------------- 297 (415)
++.+. ++..+++.|++++||+++++|.++..+.+. +..+.
T Consensus 376 ~~~~~-~~~~l~~di~~~~pT~~~~VP~v~~~i~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~v~~k 454 (746)
T PTZ00342 376 NIWSK-DINYFSKDIYNSKGNILAGVPKVFNRIYTNIMTEINNLPPLKRFLVKKILSLRKSNNNGGFSKFLEGITHISSK 454 (746)
T ss_pred EEeCC-CHHHHHHHHHHhCCcEEEchHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHhhcCCcchHHHHHHHHHHH
Confidence 98865 899999999999999999999999888642 10000
Q ss_pred ---CCcccceeeeecCCCCCHHHHHHHHhhCCCCccccccccccCCccccccccccCCccccCCCcccccc-cCCeEEEE
Q 014952 298 ---YDMSSIRTVMSGAAPMGKELEDAVRAKLPHAKLGQGYGMTEAGPVLSMCLAFAKEPFEIKSGACGTVV-RNAEMKIV 373 (415)
Q Consensus 298 ---~~l~~lr~v~~gG~~l~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~G~p~-~~~~v~i~ 373 (415)
...++||.+++||+++++++.+++++.+ +++++++||+||+++..+.. .......+++|+|+ |+++++|+
T Consensus 455 ir~~lg~~lr~~~sGGapl~~~~~~~~~~~~-g~~i~~gYGlTEt~~~~~~~-----~~~~~~~gsvG~p~~pg~e~ki~ 528 (746)
T PTZ00342 455 IKDKVNPNLEVILNGGGKLSPKIAEELSVLL-NVNYYQGYGLTETTGPIFVQ-----HADDNNTESIGGPISPNTKYKVR 528 (746)
T ss_pred HHHhhCCCeEEEEEcCCCCCHHHHHHHHHhc-CCCEEEeeccCcccceeeec-----cCCCCCcccccCcCCCcEEEEEe
Confidence 0126899999999999999999999988 89999999999998765543 22345678999998 99999999
Q ss_pred eCCCCCCCCCCCceeEEEecCccccccccCCcceeeeee
Q 014952 374 DPDTGISLPRNQAGEICIRGAQIMKGTYHIYAPFLLSIV 412 (415)
Q Consensus 374 d~~~~~~~~~g~~Gel~v~~~~~~~gY~~~~~~~~~~~~ 412 (415)
|.+++...+.++.|||+++||+++.|||++|++|..+|.
T Consensus 529 d~~~~~~~~~~~~GEl~vrGp~v~~GY~~~pe~T~~~f~ 567 (746)
T PTZ00342 529 TWETYKATDTLPKGELLIKSDSIFSGYFLEKEQTKNAFT 567 (746)
T ss_pred cccccccCCCCCceEEEEecCcccccccCChhhhhhhcC
Confidence 966555556667899999999999999999999999873
No 7
>COG1021 EntE Peptide arylation enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=9.8e-56 Score=384.57 Aligned_cols=399 Identities=24% Similarity=0.336 Sum_probs=350.9
Q ss_pred CccccccccceeecCCCCCCCCCCCCHHhHHHhhhccCCCCcEEEeCCCCCeeeHHHHHHHHHHHHHHHHHcCCCCCCEE
Q 014952 1 MEAKQDHQEFIFRSKLPDIYIPNHLPLHTYCFENISQFADRPCIINGPTGDVYTYADVELTSRKVAAGLSKLGVQKGDVI 80 (415)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~tl~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V 80 (415)
|....+.|..-+.+.+++.-.++..|+.+.|.+.|+++|+++|++++ ++.|||+||.++++++|..|+++|+++||+|
T Consensus 4 m~~~ft~wP~~~a~~YR~~GyW~d~~l~d~L~~~A~~~pdriAv~d~--~~~~sY~eLdqr~d~LAa~l~~lGi~~Gd~v 81 (542)
T COG1021 4 MLIGFTPWPEEFARRYREKGYWQDRTLTDILTDHAARYPDRIAVIDG--ERRLSYAELDQRADRLAAGLRRLGIKPGDTV 81 (542)
T ss_pred cccCCCCCcHHHHHHHHhcCcccCCcHHHHHHHHHhhcCCceEEecC--cccccHHHHHHHHHHHHHHHHhcCCCCCCEE
Confidence 77888899999999999888899999999999999999999999998 8889999999999999999999999999999
Q ss_pred EEEcCCchhHHHHHHHHHHhCCeEeecCCCCCHHHHHHHHHhcCceEEEEcccch-----HHHHhhh-hhcCceEEEeCC
Q 014952 81 MLLLQNCPQFVFAFLGASYIGATSTTANPFYTPPEIAKQAIASKAKIIITQAVYN-----DKVRDLS-EHHGARIVTIDP 154 (415)
Q Consensus 81 ~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~vl~~~~~~-----~~~~~~~-~~~~~~~i~~~~ 154 (415)
.+.++|..++++++||++++|+.+|..-|..-..++..+....++..+|.+.... ....+.. ....++.+.+..
T Consensus 82 lvQLpN~~ef~~~~FALlrlGv~PVlALpsHr~~Ei~~f~~~~e~~~~i~~~~~~gFd~~~~ar~~~a~~~tlr~v~v~g 161 (542)
T COG1021 82 LVQLPNVAEFYITFFALLRLGVAPVLALPSHRASELGAFASQIEAALLIVARQHSGFDYRPFARELVAKHPTLRHVIVAG 161 (542)
T ss_pred EEECCchHHHHHHHHHHHHcCcchhhccchhhHHHHHHHHHhhcchheeechhhcccCcHHHHHHHHhhCCcceEEEEcc
Confidence 9999999999999999999999999999998899999999999999999876532 3333333 233456666664
Q ss_pred CCCCccchhhhhhhcccCCCCcccCCCCCeEEEecCCCCCCCCceeeechHHHHHHHhhhhcCCCCCccCCCCcEEEEcc
Q 014952 155 PPENCLHFSELITQADENEIPAVKINPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVL 234 (415)
Q Consensus 155 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (415)
..+.....+..+........+..+.+++++++...+.||||.||.|..+|.....+.....+ ...++++.+.++.+
T Consensus 162 e~~~~~~~~~~~~~~a~~~~~a~~~~~~~vA~fqLSGGTTGtPKLIPRtH~DY~Ysv~aSaE----iC~~~~~tvyL~~L 237 (542)
T COG1021 162 EAEHPSVLEAALCHPAGLFTPAPPADAGEVAFFQLSGGTTGTPKLIPRTHNDYYYSVRASAE----ICGFDQQTVYLCAL 237 (542)
T ss_pred CCCCcchhhhhhhCccccCCcCCCCCCCceEEEEecCCCCCCCccccccccceeeeeeehhh----hhCcCccceEEEec
Confidence 44433344444344444455567788899999999999999999999999999999988888 55799999999999
Q ss_pred chHHHHhhHH-HHHHHHHcCcEEEEcCCCCHHHHHHHHHhcCceeeecchHHHHHHHcCCCCCCCCcccceeeeecCCCC
Q 014952 235 PLFHIYSLNS-VLLCALRVGAAILIMQKFDIVKLMELVQKYKVTVAPFVPPIVLAVAKSGDVDKYDMSSIRTVMSGAAPM 313 (415)
Q Consensus 235 pl~~~~g~~~-~~l~~l~~G~~~v~~~~~~~~~~~~~l~~~~~t~l~~~p~~l~~l~~~~~~~~~~l~~lr~v~~gG~~l 313 (415)
|..|.+.+.. +.++.++.|+++|+.+..+++..+.+|+++++|+..++|.....+++..+.+..+|+|||.+-+||+.+
T Consensus 238 P~AHNfplssPG~LGv~~agG~VVla~~psp~~~F~lIerh~Vt~tALVPpla~LWlqa~e~~~~~LsSLrllQVGGarl 317 (542)
T COG1021 238 PAAHNFPLSSPGALGVFLAGGTVVLAPDPSPELCFPLIERHGVTVTALVPPLASLWLQAAEWERADLSSLRLLQVGGARL 317 (542)
T ss_pred ccccCCCCCCcchhheeeeccEEEECCCCCHHHHHHHHHHhccceEEeccHHHHHHHHhhhcccCCchheeEEeecCccc
Confidence 9999888776 789999999999999999999999999999999999999999999999888889999999999999999
Q ss_pred CHHHHHHHHhhCCCCccccccccccCCccccccccccCCccccCCCcccccc-cCCeEEEEeCCCCCCCCCCCceeEEEe
Q 014952 314 GKELEDAVRAKLPHAKLGQGYGMTEAGPVLSMCLAFAKEPFEIKSGACGTVV-RNAEMKIVDPDTGISLPRNQAGEICIR 392 (415)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~G~p~-~~~~v~i~d~~~~~~~~~g~~Gel~v~ 392 (415)
++...+++...+ ++.+.+.+||.|.-. |+...+.+.+.-..+.|+|+ |.-+++|+| ++|+++++||+|+|.++
T Consensus 318 ~~~~Arrv~~~l-gC~LQQVFGMAEGLv----nyTRLDDp~E~i~~TQGrPlsP~DEvrvvD-~dg~pv~pGE~G~LltR 391 (542)
T COG1021 318 SATLARRVPAVL-GCQLQQVFGMAEGLV----NYTRLDDPPEIIIHTQGRPLSPDDEVRVVD-ADGNPVAPGEVGELLTR 391 (542)
T ss_pred CHHHHhhchhhh-CchHHHHhhhhhhhh----cccccCCchHheeecCCCcCCCcceeEEec-CCCCCCCCCCcceeeec
Confidence 999999999999 999999999999763 44444444455557899999 888999999 55999999999999999
Q ss_pred cCccccccccCCcceeeee
Q 014952 393 GAQIMKGTYHIYAPFLLSI 411 (415)
Q Consensus 393 ~~~~~~gY~~~~~~~~~~~ 411 (415)
||..++|||+.|+-+..+|
T Consensus 392 GPYTirGYyrap~HNa~aF 410 (542)
T COG1021 392 GPYTIRGYYRAPEHNARAF 410 (542)
T ss_pred CCeeeeeeccCchhhhhcc
Confidence 9999999999999988887
No 8
>PLN02614 long-chain acyl-CoA synthetase
Probab=100.00 E-value=2.4e-54 Score=433.52 Aligned_cols=383 Identities=21% Similarity=0.277 Sum_probs=298.4
Q ss_pred CCCCCHHhHHHhhhccCCCCcEEEeCC-----CC--CeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHH
Q 014952 22 PNHLPLHTYCFENISQFADRPCIINGP-----TG--DVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAF 94 (415)
Q Consensus 22 ~~~~tl~~~l~~~a~~~p~~~a~~~~~-----~~--~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~ 94 (415)
++..|+.+.|.++++++|+++|++..+ .+ ..+||+||.++++++|++|+++|+++||+|+|+++|+++++++.
T Consensus 42 ~~~~t~~~~l~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~~Gv~~Gd~Vai~~~n~~e~~~~~ 121 (666)
T PLN02614 42 EGMDSCWDVFRMSVEKYPNNPMLGRREIVDGKPGKYVWQTYQEVYDIVIKLGNSLRSVGVKDEAKCGIYGANSPEWIISM 121 (666)
T ss_pred CCCCcHHHHHHHHHHhCCCCCeEEEecccCCCCCCcEEeEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHH
Confidence 445699999999999999999998421 12 35899999999999999999999999999999999999999999
Q ss_pred HHHHHhCCeEeecCCCCCHHHHHHHHHhcCceEEEEcccchHHHHhhhhhc---CceEEEeCCCCC---------C--cc
Q 014952 95 LGASYIGATSTTANPFYTPPEIAKQAIASKAKIIITQAVYNDKVRDLSEHH---GARIVTIDPPPE---------N--CL 160 (415)
Q Consensus 95 lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~vl~~~~~~~~~~~~~~~~---~~~~i~~~~~~~---------~--~~ 160 (415)
|||+++|++++|+++.++.+++.+++++++++++|++.+....+....... -..++.++.... + ..
T Consensus 122 lA~~~~Gav~vpl~~~~~~~~l~~il~~~~~~~vi~~~~~~~~~~~~~~~~~~~l~~vi~~~~~~~~~~~~~~~~~~~~~ 201 (666)
T PLN02614 122 EACNAHGLYCVPLYDTLGAGAVEFIISHSEVSIVFVEEKKISELFKTCPNSTEYMKTVVSFGGVSREQKEEAETFGLVIY 201 (666)
T ss_pred HHHHHcCCEEEEecCCCCHHHHHHHHhccCCCEEEECHHHHHHHHHhcccccccceEEEEeCCCChHHhhhhhhcCcEEE
Confidence 999999999999999999999999999999999999876554443222111 123444443110 1 23
Q ss_pred chhhhhhhcccCCCCcccCCCCCeEEEecCCCCCCCCceeeechHHHHHHHhhhhcCCC-CCccCCCCcEEEEccchHHH
Q 014952 161 HFSELITQADENEIPAVKINPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGEN-PNLYLHKEDVILCVLPLFHI 239 (415)
Q Consensus 161 ~~~~l~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~pl~~~ 239 (415)
.+++++........+.....++++++|+|||||||.||||++||+++...+........ ....+.++|++++++|++|.
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~d~a~I~yTSGTTG~PKGV~lth~nl~~~~~~~~~~~~~~~~~~~~~d~~l~~lPl~H~ 281 (666)
T PLN02614 202 AWDEFLKLGEGKQYDLPIKKKSDICTIMYTSGTTGDPKGVMISNESIVTLIAGVIRLLKSANAALTVKDVYLSYLPLAHI 281 (666)
T ss_pred EHHHHHhhcccCCCCCCCCCCCceEEEEEcCCCCCCCcEEEEecHHHHHHHHHHHhhccccccCCCCCcEEEEeccHHHH
Confidence 56665322221112223346799999999999999999999999999987665543211 01246788999999999999
Q ss_pred HhhHHHHHHHHHcCcEEEEcCCCCHHHHHHHHHhcCceeeecchHHHHHHHcCCCC------------------------
Q 014952 240 YSLNSVLLCALRVGAAILIMQKFDIVKLMELVQKYKVTVAPFVPPIVLAVAKSGDV------------------------ 295 (415)
Q Consensus 240 ~g~~~~~l~~l~~G~~~v~~~~~~~~~~~~~l~~~~~t~l~~~p~~l~~l~~~~~~------------------------ 295 (415)
++... ....+..|+++++.+ +++..+++.+++++||+++++|.++..+.+....
T Consensus 282 ~~~~~-~~~~l~~G~~v~~~~-~~~~~~~~~i~~~~~T~~~~vP~~~~~l~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~ 359 (666)
T PLN02614 282 FDRVI-EECFIQHGAAIGFWR-GDVKLLIEDLGELKPTIFCAVPRVLDRVYSGLQKKLSDGGFLKKFVFDSAFSYKFGNM 359 (666)
T ss_pred HHHHH-HHHHHHhCCEEEEeC-CCHHHHHHHHHHhCCeEEEecHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHH
Confidence 99863 566788999998875 5899999999999999999999999877642100
Q ss_pred -------CCC-------------Cc-ccceeeeecCCCCCHHHHHHHHhhCCCCccccccccccCCccccccccccCCcc
Q 014952 296 -------DKY-------------DM-SSIRTVMSGAAPMGKELEDAVRAKLPHAKLGQGYGMTEAGPVLSMCLAFAKEPF 354 (415)
Q Consensus 296 -------~~~-------------~l-~~lr~v~~gG~~l~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~ 354 (415)
... .+ ++||.+++||+++++++ +++.+.++++++++.||+||+++..+... ...
T Consensus 360 ~~~~~~~~~~~~~~~~~~~~~~~~lg~~lr~~~~Gga~l~~~~-~~~~~~~~~~~i~~~YG~TE~~~~~~~~~----~~~ 434 (666)
T PLN02614 360 KKGQSHVEASPLCDKLVFNKVKQGLGGNVRIILSGAAPLASHV-ESFLRVVACCHVLQGYGLTESCAGTFVSL----PDE 434 (666)
T ss_pred HcCCCCcccchHHHHHHHHHHHHHhCCcEEEEEEcCCCCCHHH-HHHHHHhcCCCEEeeCchHhhhhheeeec----ccc
Confidence 000 01 68999999999999875 56666775689999999999885443321 111
Q ss_pred ccCCCcccccccCCeEEEEeC-C-CCCCCCCCCceeEEEecCccccccccCCcceeeee
Q 014952 355 EIKSGACGTVVRNAEMKIVDP-D-TGISLPRNQAGEICIRGAQIMKGTYHIYAPFLLSI 411 (415)
Q Consensus 355 ~~~~~~~G~p~~~~~v~i~d~-~-~~~~~~~g~~Gel~v~~~~~~~gY~~~~~~~~~~~ 411 (415)
....+++|+|+|+++++|+|. + ++++++.|+.|||+|+||+++.|||++|++|..+|
T Consensus 435 ~~~~gsvG~p~pg~evki~d~~~~~~~~~~~g~~GEl~vrGp~v~~GY~~~pe~T~~~f 493 (666)
T PLN02614 435 LDMLGTVGPPVPNVDIRLESVPEMEYDALASTPRGEICIRGKTLFSGYYKREDLTKEVL 493 (666)
T ss_pred CCcCCcccCcCCceEEEEeeecccCcccCCCCCCceEEEcCCcccccccCCHHHhhhhh
Confidence 235689999999999999983 3 34789999999999999999999999999998877
No 9
>PLN02574 4-coumarate--CoA ligase-like
Probab=100.00 E-value=3.1e-53 Score=419.97 Aligned_cols=397 Identities=32% Similarity=0.515 Sum_probs=321.4
Q ss_pred ccccceeecCCCCCCCCC--CCCHHhHHHhhhccCCCCcEEEeCCCCCeeeHHHHHHHHHHHHHHHHH-cCCCCCCEEEE
Q 014952 6 DHQEFIFRSKLPDIYIPN--HLPLHTYCFENISQFADRPCIINGPTGDVYTYADVELTSRKVAAGLSK-LGVQKGDVIML 82 (415)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~--~~tl~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~~a~~L~~-~g~~~g~~V~i 82 (415)
++...+|++.+|+++.|. ++++.+.+.+. +.+|+++++++...+..+||+||.++++++|+.|++ +|+++||+|++
T Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~a~~~~~~~~~~Ty~el~~~~~~lA~~L~~~~G~~~gd~V~i 97 (560)
T PLN02574 19 SPETGIYSSKHPPVPLPSDPNLDAVSFIFSH-HNHNGDTALIDSSTGFSISYSELQPLVKSMAAGLYHVMGVRQGDVVLL 97 (560)
T ss_pred CcCCeeecCCCCCCCCCCCCCCCHHHHHhcC-cccCCCCEEEECCCCCcccHHHHHHHHHHHHHHHHHHhCCCCCCEEEE
Confidence 344677888777666554 35666666666 688999999987555689999999999999999999 99999999999
Q ss_pred EcCCchhHHHHHHHHHHhCCeEeecCCCCCHHHHHHHHHhcCceEEEEcccchHHHHhhhhhcCceEEEeCCC------C
Q 014952 83 LLQNCPQFVFAFLGASYIGATSTTANPFYTPPEIAKQAIASKAKIIITQAVYNDKVRDLSEHHGARIVTIDPP------P 156 (415)
Q Consensus 83 ~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~i~~~~~------~ 156 (415)
+++|+.++++++|||+++|++++|++|.++.+++.+++..+++.+++++.+..+.+... ...++.++.. .
T Consensus 98 ~~~n~~~~~~~~la~~~~G~v~v~l~p~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~ 173 (560)
T PLN02574 98 LLPNSVYFPVIFLAVLSLGGIVTTMNPSSSLGEIKKRVVDCSVGLAFTSPENVEKLSPL----GVPVIGVPENYDFDSKR 173 (560)
T ss_pred ECCCcchHHHHHHHHHHhCeEEeCcCcccCHHHHHHHHHhcCCEEEEECHHHHHHHHhc----CCcEEecCcccccccCc
Confidence 99999999999999999999999999999999999999999999999998766555432 2333333211 1
Q ss_pred CCccchhhhhhhcccCCCCcccCCCCCeEEEecCCCCCCCCceeeechHHHHHHHhhhhcCCCCCc-cCCCCcEEEEccc
Q 014952 157 ENCLHFSELITQADENEIPAVKINPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNL-YLHKEDVILCVLP 235 (415)
Q Consensus 157 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~p 235 (415)
.....+++++.. .....+.....++++++|+|||||||.||+|.++|+++......+........ .....++++..+|
T Consensus 174 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p 252 (560)
T PLN02574 174 IEFPKFYELIKE-DFDFVPKPVIKQDDVAAIMYSSGTTGASKGVVLTHRNLIAMVELFVRFEASQYEYPGSDNVYLAALP 252 (560)
T ss_pred cCcccHHHHhhc-CCcccccCCCCcCCEEEEEcCCCccCCCcEEEEeHHHHHHHHHHHHhccccccccCCCCcEEEEecc
Confidence 122334444222 22222233456789999999999999999999999999887765543211111 1235688899999
Q ss_pred hHHHHhhHHHHHHHHHcCcEEEEcCCCCHHHHHHHHHhcCceeeecchHHHHHHHcCCCC-CCCCcccceeeeecCCCCC
Q 014952 236 LFHIYSLNSVLLCALRVGAAILIMQKFDIVKLMELVQKYKVTVAPFVPPIVLAVAKSGDV-DKYDMSSIRTVMSGAAPMG 314 (415)
Q Consensus 236 l~~~~g~~~~~l~~l~~G~~~v~~~~~~~~~~~~~l~~~~~t~l~~~p~~l~~l~~~~~~-~~~~l~~lr~v~~gG~~l~ 314 (415)
++|.+|+...++.++..|+++++.+.+++..+++.++++++|++.++|+++..|.+.... ...+++++|.+++||++++
T Consensus 253 l~h~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~lr~~~~gg~~l~ 332 (560)
T PLN02574 253 MFHIYGLSLFVVGLLSLGSTIVVMRRFDASDMVKVIDRFKVTHFPVVPPILMALTKKAKGVCGEVLKSLKQVSCGAAPLS 332 (560)
T ss_pred hHHHHHHHHHHHHHHhcCCEEEEecCCCHHHHHHHHHHcCCeEEecCCHHHHHHHhCccccccCccccceEEEEecccCC
Confidence 999999987777888899999999989999999999999999999999999999887543 3456889999999999999
Q ss_pred HHHHHHHHhhCCCCccccccccccCCccccccccccCCccccCCCcccccccCCeEEEEeCCCCCCCCCCCceeEEEecC
Q 014952 315 KELEDAVRAKLPHAKLGQGYGMTEAGPVLSMCLAFAKEPFEIKSGACGTVVRNAEMKIVDPDTGISLPRNQAGEICIRGA 394 (415)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~G~p~~~~~v~i~d~~~~~~~~~g~~Gel~v~~~ 394 (415)
.++.+++.+.+++..+++.||+||++++.+... ........+++|+|+|+++++|+|++++++++.|+.|||+|+|+
T Consensus 333 ~~~~~~~~~~~~~~~v~~~YG~tE~~~~~~~~~---~~~~~~~~~~vG~~~~~~~v~i~d~~~g~~~~~g~~Gei~v~g~ 409 (560)
T PLN02574 333 GKFIQDFVQTLPHVDFIQGYGMTESTAVGTRGF---NTEKLSKYSSVGLLAPNMQAKVVDWSTGCLLPPGNCGELWIQGP 409 (560)
T ss_pred HHHHHHHHHHCCCCcEEecccccccCceeecCC---CccccCCCCceeeeCCCcEEEEEeCCCCcCCCCCCCeEEEEECc
Confidence 999999999998899999999999986543221 11222456789999999999999988899999999999999999
Q ss_pred ccccccccCCcceeeee
Q 014952 395 QIMKGTYHIYAPFLLSI 411 (415)
Q Consensus 395 ~~~~gY~~~~~~~~~~~ 411 (415)
+++.|||++|+.+.+.|
T Consensus 410 ~~~~GY~~~~~~t~~~~ 426 (560)
T PLN02574 410 GVMKGYLNNPKATQSTI 426 (560)
T ss_pred chhhhhcCChhHhhhhc
Confidence 99999999999987766
No 10
>PRK06334 long chain fatty acid--[acyl-carrier-protein] ligase; Validated
Probab=100.00 E-value=3.5e-53 Score=417.09 Aligned_cols=373 Identities=20% Similarity=0.263 Sum_probs=306.8
Q ss_pred CCCCHHhHHHhhhccCCCCcEEEeCCCCCeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHHhCC
Q 014952 23 NHLPLHTYCFENISQFADRPCIINGPTGDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGA 102 (415)
Q Consensus 23 ~~~tl~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~ 102 (415)
...++.+.|.+.++++|+++++++. ..+++||+||.++++++|+.|.+. +||+|+++++|++++++++|||+++|+
T Consensus 17 ~~~~~~~~~~~~~~~~p~~~a~~~~-~~~~~Ty~el~~~~~~lA~~L~~~---~gd~Val~~~n~~e~~~~~lA~~~~G~ 92 (539)
T PRK06334 17 SGKTVLESFLKLCSEMTTATVCWDE-QLGKLSYNQVRKAVIALATKVSKY---PDQHIGIMMPASAGAYIAYFATLLSGK 92 (539)
T ss_pred cCCcHHHHHHHHHHhCCCceEEEeC-CCCcccHHHHHHHHHHHHHHHhhc---cCCeEEEEcCCchHHHHHHHHHHhcCC
Confidence 3578999999999999999999875 237899999999999999999873 899999999999999999999999999
Q ss_pred eEeecCCCCCHHHHHHHHHhcCceEEEEcccchHHHHhhhhh---cCceEEEeCCCCCCccchhhhhhhcc---cC----
Q 014952 103 TSTTANPFYTPPEIAKQAIASKAKIIITQAVYNDKVRDLSEH---HGARIVTIDPPPENCLHFSELITQAD---EN---- 172 (415)
Q Consensus 103 ~~v~l~~~~~~~~~~~~l~~~~~~~vl~~~~~~~~~~~~~~~---~~~~~i~~~~~~~~~~~~~~l~~~~~---~~---- 172 (415)
+++|+++.++.+++.++++++++++++++.+..+.+...... ....++.+++... ...+.+...... ..
T Consensus 93 v~vpl~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 171 (539)
T PRK06334 93 IPVMINWSQGLREVTACANLVGVTHVLTSKQLMQHLAQTHGEDAEYPFSLIYMEEVRK-ELSFWEKCRIGIYMSIPFEWL 171 (539)
T ss_pred eeEecCcccchHHHHHHHHHcCCCEEEehHHHHHHHhhhhhccccccccEEEEehhhh-hccHHHhhhhhhhhcCCchhh
Confidence 999999999999999999999999999998776655443221 1123444432111 011111100000 00
Q ss_pred --CCCcccCCCCCeEEEecCCCCCCCCceeeechHHHHHHHhhhhcCCCCCccCCCCcEEEEccchHHHHhhHHHHHHHH
Q 014952 173 --EIPAVKINPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCAL 250 (415)
Q Consensus 173 --~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~l~~l 250 (415)
........++++++|+|||||||.||+|.++|+++......... .+...++|++++.+|++|.+++...++.++
T Consensus 172 ~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~----~~~~~~~d~~l~~~p~~h~~g~~~~~~~~l 247 (539)
T PRK06334 172 MRWFGVSDKDPEDVAVILFTSGTEKLPKGVPLTHANLLANQRACLK----FFSPKEDDVMMSFLPPFHAYGFNSCTLFPL 247 (539)
T ss_pred hhcccCCCCCcCCEEEEEECCCCCCCCCEEEEcHHHHHHHHHHHHH----hcCCCCCceEEEecchHhhhhhHHHHHHHH
Confidence 00122456789999999999999999999999999987766655 445788999999999999999876678899
Q ss_pred HcCcEEEEcC-CCCHHHHHHHHHhcCceeeecchHHHHHHHcCCCCCCCCcccceeeeecCCCCCHHHHHHHHhhCCCCc
Q 014952 251 RVGAAILIMQ-KFDIVKLMELVQKYKVTVAPFVPPIVLAVAKSGDVDKYDMSSIRTVMSGAAPMGKELEDAVRAKLPHAK 329 (415)
Q Consensus 251 ~~G~~~v~~~-~~~~~~~~~~l~~~~~t~l~~~p~~l~~l~~~~~~~~~~l~~lr~v~~gG~~l~~~~~~~~~~~~~~~~ 329 (415)
..|+++++.+ .+++..+++.|+++++|++.++|.++..|++........+++||.+++||+++++++.+++.+.|++..
T Consensus 248 ~~G~~vv~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~~~~~ 327 (539)
T PRK06334 248 LSGVPVVFAYNPLYPKKIVEMIDEAKVTFLGSTPVFFDYILKTAKKQESCLPSLRFVVIGGDAFKDSLYQEALKTFPHIQ 327 (539)
T ss_pred HcCCeEEEecCCCCHHHHHHHHHHhCCcEEEecHHHHHHHHHhhhhcccccccccEEEECCccCCHHHHHHHHHHCCCCe
Confidence 9999998875 579999999999999999999999999998876555667899999999999999999999999998899
Q ss_pred cccccccccCCccccccccccCCccccCCCcccccccCCeEEEEeCCCCCCCCCCCceeEEEecCccccccccCCccee
Q 014952 330 LGQGYGMTEAGPVLSMCLAFAKEPFEIKSGACGTVVRNAEMKIVDPDTGISLPRNQAGEICIRGAQIMKGTYHIYAPFL 408 (415)
Q Consensus 330 ~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~G~p~~~~~v~i~d~~~~~~~~~g~~Gel~v~~~~~~~gY~~~~~~~~ 408 (415)
+++.||+||++.+++... .......+++|+|+++++++|+|++++++++.|+.|||+|+|++++.|||++|+++.
T Consensus 328 i~~~YG~TE~~~~~~~~~----~~~~~~~~~vG~p~~g~~v~i~d~~~~~~~~~g~~Gel~v~g~~~~~GY~~~~~~~~ 402 (539)
T PRK06334 328 LRQGYGTTECSPVITINT----VNSPKHESCVGMPIRGMDVLIVSEETKVPVSSGETGLVLTRGTSLFSGYLGEDFGQG 402 (539)
T ss_pred EEecccccccCceEEecc----CCCCCCCCcCceecCCCEEEEEcCCCCccCCCCceEEEEEecCcccccccCCccccc
Confidence 999999999987655431 111223567999999999999998788999999999999999999999999998653
No 11
>PLN02736 long-chain acyl-CoA synthetase
Probab=100.00 E-value=4.8e-53 Score=424.94 Aligned_cols=378 Identities=25% Similarity=0.326 Sum_probs=304.8
Q ss_pred CCCCCHHhHHHhhhccCCCCcEEEe---CCC----CCeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHH
Q 014952 22 PNHLPLHTYCFENISQFADRPCIIN---GPT----GDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAF 94 (415)
Q Consensus 22 ~~~~tl~~~l~~~a~~~p~~~a~~~---~~~----~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~ 94 (415)
+...|+.+++.++++++|+++++.. .+. .+.+||+||.++++++|++|+++|+++||+|+|+++|++++++++
T Consensus 41 ~~~~tl~~~l~~~a~~~p~~~al~~~~~~~~~~~~~~~lTy~el~~~v~~lA~~L~~~Gv~~gd~Vai~~~n~~e~~~~~ 120 (651)
T PLN02736 41 PEIGTLHDNFVYAVETFRDYKYLGTRIRVDGTVGEYKWMTYGEAGTARTAIGSGLVQHGIPKGACVGLYFINRPEWLIVD 120 (651)
T ss_pred CCCCCHHHHHHHHHHhCCCCCeEEEEecCCCCCCCcEEEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHHHHH
Confidence 3457999999999999999999943 211 146999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCeEeecCCCCCHHHHHHHHHhcCceEEEEcccchHHHHhhhhhc-Cce-EEEeCCCC-----------CCccc
Q 014952 95 LGASYIGATSTTANPFYTPPEIAKQAIASKAKIIITQAVYNDKVRDLSEHH-GAR-IVTIDPPP-----------ENCLH 161 (415)
Q Consensus 95 lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~vl~~~~~~~~~~~~~~~~-~~~-~i~~~~~~-----------~~~~~ 161 (415)
+||+++|++++|+++.++.+++.+++++++++++|++.+..+.+....... .++ ++.++... .....
T Consensus 121 lA~~~~G~v~vpl~~~~~~~~l~~il~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~ii~~~~~~~~~~~~~~~~~~~~~~ 200 (651)
T PLN02736 121 HACSAYSYVSVPLYDTLGPDAVKFIVNHAEVAAIFCVPQTLNTLLSCLSEIPSVRLIVVVGGADEPLPSLPSGTGVEIVT 200 (651)
T ss_pred HHHHHcCCeEEEeecCCCHHHHHHHHhccCCCEEEECHHHHHHHHHHhhcCCCceEEEEECCCchhhhhhhccCCcEEEE
Confidence 999999999999999999999999999999999999987766655543322 233 33333211 11245
Q ss_pred hhhhhhhcccCCCCcccCCCCCeEEEecCCCCCCCCceeeechHHHHHHHhhhhcCCCCCccCCCCcEEEEccchHHHHh
Q 014952 162 FSELITQADENEIPAVKINPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYS 241 (415)
Q Consensus 162 ~~~l~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g 241 (415)
+++++........+.....++++++|+|||||||.||||++||+++..++..... .+.+.++|++++.+|++|.++
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~dd~a~IlyTSGTTG~PKGV~lsh~~l~~~~~~~~~----~~~~~~~d~~l~~lPl~h~~~ 276 (651)
T PLN02736 201 YSKLLAQGRSSPQPFRPPKPEDVATICYTSGTTGTPKGVVLTHGNLIANVAGSSL----STKFYPSDVHISYLPLAHIYE 276 (651)
T ss_pred HHHHHHhcccCCCCCCCCCccceEEEEEcCCCCCCCcEEEEecHHHHHHHHHHHh----ccCCCCCCEEEEeCCHHHHHH
Confidence 5665332222122233456799999999999999999999999999988887766 446788999999999999999
Q ss_pred hHHHHHHHHHcCcEEEEcCCCCHHHHHHHHHhcCceeeecchHHHHHHHcCCC---------------------------
Q 014952 242 LNSVLLCALRVGAAILIMQKFDIVKLMELVQKYKVTVAPFVPPIVLAVAKSGD--------------------------- 294 (415)
Q Consensus 242 ~~~~~l~~l~~G~~~v~~~~~~~~~~~~~l~~~~~t~l~~~p~~l~~l~~~~~--------------------------- 294 (415)
+. .++.++..|+++++.+. ++..+++.++++++|+++++|.++..+.+...
T Consensus 277 ~~-~~~~~l~~G~~i~~~~~-~~~~~~~~i~~~~~t~~~~vP~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (651)
T PLN02736 277 RV-NQIVMLHYGVAVGFYQG-DNLKLMDDLAALRPTIFCSVPRLYNRIYDGITNAVKESGGLKERLFNAAYNAKKQALEN 354 (651)
T ss_pred HH-HHHHHHHcCCEEEEeCC-CHHHHHHHHHHhCCcEEecchHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHc
Confidence 98 57788999999988764 78899999999999999999999987754210
Q ss_pred ---CCC-----------CCc-ccceeeeecCCCCCHHHHHHHHhhCCCCccccccccccCCccccccccccCCccccCCC
Q 014952 295 ---VDK-----------YDM-SSIRTVMSGAAPMGKELEDAVRAKLPHAKLGQGYGMTEAGPVLSMCLAFAKEPFEIKSG 359 (415)
Q Consensus 295 ---~~~-----------~~l-~~lr~v~~gG~~l~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~ 359 (415)
... ..+ +++|.+++||+++++++.+++++.+ ++++++.||+||+++.++.. .......+
T Consensus 355 ~~~~~~~~~~~~~~~~~~~lg~~lr~~~~gGa~l~~~~~~~~~~~~-g~~~~~~YG~TE~~~~~~~~-----~~~~~~~~ 428 (651)
T PLN02736 355 GKNPSPMWDRLVFNKIKAKLGGRVRFMSSGASPLSPDVMEFLRICF-GGRVLEGYGMTETSCVISGM-----DEGDNLSG 428 (651)
T ss_pred CCCCCchHHHHHHHHHHHHhcCcEEEEEeCCCCCCHHHHHHHHHHh-CCCeEEEechHHhchheecc-----CCCCCCCC
Confidence 000 001 4899999999999999999999998 78999999999998765543 22345678
Q ss_pred cccccccCCeEEEEeCCCCC---CCCCCCceeEEEecCccccccccCCcceeeee
Q 014952 360 ACGTVVRNAEMKIVDPDTGI---SLPRNQAGEICIRGAQIMKGTYHIYAPFLLSI 411 (415)
Q Consensus 360 ~~G~p~~~~~v~i~d~~~~~---~~~~g~~Gel~v~~~~~~~gY~~~~~~~~~~~ 411 (415)
++|+|+|+++++|+|.+++. ...+++.|||+|+||+++.|||++|+.+..+|
T Consensus 429 ~vG~p~pg~~v~i~d~~~~~~~~~~~~~~~GEl~vrgp~v~~GY~~~~~~t~~~~ 483 (651)
T PLN02736 429 HVGSPNPACEVKLVDVPEMNYTSEDQPYPRGEICVRGPIIFKGYYKDEVQTREVI 483 (651)
T ss_pred ccCCccCceEEEEEEccccCcccCCCCCCCceEEecCCccccccccCHHHHHhhh
Confidence 99999999999999954332 22344579999999999999999999998776
No 12
>COG1022 FAA1 Long-chain acyl-CoA synthetases (AMP-forming) [Lipid metabolism]
Probab=100.00 E-value=1.8e-53 Score=407.38 Aligned_cols=365 Identities=30% Similarity=0.385 Sum_probs=293.9
Q ss_pred CCCCHHhHHHhhhccCCCCcEEEeCCCC--CeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHHh
Q 014952 23 NHLPLHTYCFENISQFADRPCIINGPTG--DVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYI 100 (415)
Q Consensus 23 ~~~tl~~~l~~~a~~~p~~~a~~~~~~~--~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~ 100 (415)
...++...+.++++.+|+..++.....+ ..+||+|+..++.++|.+|+.+|+.+||+|+|++.|+.+|+++.+||+.+
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~ty~e~~~~v~~~a~gL~~lg~~~gdrvai~a~nr~eW~i~d~a~~~~ 93 (613)
T COG1022 14 EIHTLPKRLAERVKDRPDGVALMYKELGGWEAITYRELYERVRALASGLLSLGIPAGDRVAIFAANRPEWAIADLAILAL 93 (613)
T ss_pred hcccHHHHHHHHhhcCCcceeEeeecCCcceEeeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEeCCCHHHHHHHHHHHHc
Confidence 4678999999999999999999866433 68999999999999999999999977999999999999999999999999
Q ss_pred CCeEeecCCCCCHHHHHHHHHhcCceEEEEccc-chHHHHhhhhhcCc--eEE-EeC---C-CCCCccchhhhh------
Q 014952 101 GATSTTANPFYTPPEIAKQAIASKAKIIITQAV-YNDKVRDLSEHHGA--RIV-TID---P-PPENCLHFSELI------ 166 (415)
Q Consensus 101 G~~~v~l~~~~~~~~~~~~l~~~~~~~vl~~~~-~~~~~~~~~~~~~~--~~i-~~~---~-~~~~~~~~~~l~------ 166 (415)
|++.||+.++.+.+++.+++++++++++|++.. ..+.+.......+. ..+ .++ . .......++...
T Consensus 94 g~v~Vp~y~t~~~~~~~~iL~~se~~~i~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (613)
T COG1022 94 GAVSVPIYSTSTPEQLAYILNESESKVIFVENQELLDLVLPVLEDCPKVVDLIVIIDLVREAVEAKALVLEVFPDEGISL 173 (613)
T ss_pred CCeEEecCCCCCHHHHHHHHhcCCceEEEecchHHHHHHHhhhccccchhhhhhhhhhhhhccchhhccccccccccchh
Confidence 999999999999999999999999999999974 44444444332111 000 000 0 000001111100
Q ss_pred --hhcccCCCCcccCCCCCeEEEecCCCCCCCCceeeechHHHHHHHhhhhcCCCCCcc-CCCCcEEEEccchHHHHhhH
Q 014952 167 --TQADENEIPAVKINPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLY-LHKEDVILCVLPLFHIYSLN 243 (415)
Q Consensus 167 --~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~pl~~~~g~~ 243 (415)
...........+..++|+|.|+|||||||.||||++||+|+.+++....+ .+. ..++|+.++++|++|++.++
T Consensus 174 ~~~~~~~~~~~~~~~~~dDlatiiYTSGTTG~PKGVmLth~N~~~~v~~~~~----~~~~~~~~d~~LsfLPlaHi~Er~ 249 (613)
T COG1022 174 FLIDSAGLEGRIAPPKPDDLATIIYTSGTTGTPKGVMLTHRNLLAQVAGIDE----VLPPIGPGDRVLSFLPLAHIFERA 249 (613)
T ss_pred hhhcccccccccCCCCccceEEEEEcCCCCCCCceEEEehHHHHHHHHHHHh----hCCCCCCCcEEEEeCcHHHHHHHH
Confidence 01111111124678899999999999999999999999999999999888 443 78999999999999999998
Q ss_pred HHHHHHHHcCcEEEEcCCCCHHHHHHHHHhcCceeeecchHHHHHHHcC--------C----------------------
Q 014952 244 SVLLCALRVGAAILIMQKFDIVKLMELVQKYKVTVAPFVPPIVLAVAKS--------G---------------------- 293 (415)
Q Consensus 244 ~~~l~~l~~G~~~v~~~~~~~~~~~~~l~~~~~t~l~~~p~~l~~l~~~--------~---------------------- 293 (415)
......+..|++... ..++..+++.+++++||++.++|.+|+.+-+. .
T Consensus 250 ~~~~~~~~~g~~~~~--~~~~~~~~~dl~~~rPt~m~~VPRvwE~i~~~I~~kv~~~~~~~~~if~~a~~~~~~~~~~~~ 327 (613)
T COG1022 250 FEGGLALYGGVTVLF--KEDPRTLLEDLKEVRPTVMIGVPRVWEKVYKGIMEKVAKAPAVRRKLFRWALKVAYKKISRAL 327 (613)
T ss_pred HHHHHHhhcceEEEe--cCCHHHHHHHHHHhCCeEEeechHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHhhh
Confidence 533444444444444 34899999999999999999999999765430 0
Q ss_pred -C------------------CCCCCcccceeeeecCCCCCHHHHHHHHhhCCCCccccccccccCCccccccccccCCcc
Q 014952 294 -D------------------VDKYDMSSIRTVMSGAAPMGKELEDAVRAKLPHAKLGQGYGMTEAGPVLSMCLAFAKEPF 354 (415)
Q Consensus 294 -~------------------~~~~~l~~lr~v~~gG~~l~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~ 354 (415)
. ++.. -.++|++++||+++++++...++.. ++++.++||+||++++++++ .+.
T Consensus 328 ~~~~~~~~~~~~d~LVf~Kir~~l-Ggri~~~~sGGa~l~~~~~~f~~~l--Gi~i~eGYGlTEts~~~~v~-----~~~ 399 (613)
T COG1022 328 LGGGPLSWLLVADRLVFRKIRDAL-GGRIRYALSGGAPLSPELLHFFRSL--GIPILEGYGLTETSAVVSVN-----PPD 399 (613)
T ss_pred cccCCcchhhhhhHHHHHHHHHHh-CCcEEEEEecCCcCCHHHHHHHHHc--CCCeEEEecccccccceEEc-----ccc
Confidence 0 0011 1489999999999999999999998 89999999999999988887 678
Q ss_pred ccCCCcccccccCCeEEEEeCCCCCCCCCCCceeEEEecCccccccccCCcceeeeee
Q 014952 355 EIKSGACGTVVRNAEMKIVDPDTGISLPRNQAGEICIRGAQIMKGTYHIYAPFLLSIV 412 (415)
Q Consensus 355 ~~~~~~~G~p~~~~~v~i~d~~~~~~~~~g~~Gel~v~~~~~~~gY~~~~~~~~~~~~ 412 (415)
....+++|+|+|++++||+| + |||+|+||+||+|||++|++|.++|-
T Consensus 400 ~~~~gtvG~p~p~~evKI~d-~----------GEilVRG~~Vm~GYyk~pe~Taeaf~ 446 (613)
T COG1022 400 RFVLGTVGKPLPGIEVKIAD-D----------GEILVRGPNVMKGYYKNPEATAEAFT 446 (613)
T ss_pred CcccCCcCCcCCCceEEEcc-C----------ceEEEecchhcchhcCChHHHhhhcc
Confidence 88899999999999999999 5 99999999999999999999999884
No 13
>PLN02861 long-chain-fatty-acid-CoA ligase
Probab=100.00 E-value=5.8e-53 Score=423.78 Aligned_cols=382 Identities=22% Similarity=0.294 Sum_probs=296.7
Q ss_pred CCCCCHHhHHHhhhccCCCCcEEEeC-----CCC--CeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHH
Q 014952 22 PNHLPLHTYCFENISQFADRPCIING-----PTG--DVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAF 94 (415)
Q Consensus 22 ~~~~tl~~~l~~~a~~~p~~~a~~~~-----~~~--~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~ 94 (415)
++..|+.+.|.+.++++|+++|+... ..+ +++||+||.++++++|++|.++|+++||+|+|+++|++++++++
T Consensus 40 ~~~~t~~~~l~~~~~~~p~~~al~~~~~~~~~~g~~~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~Vai~~~n~~e~~~~~ 119 (660)
T PLN02861 40 ADIDSPWQFFSDAVKKYPNNQMLGRRQVTDSKVGPYVWLTYKEVYDAAIRIGSAIRSRGVNPGDRCGIYGSNCPEWIIAM 119 (660)
T ss_pred CCCCCHHHHHHHHHHhCCCCCeEEEEecCCCCCCCceEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHH
Confidence 34569999999999999999999642 112 47999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCeEeecCCCCCHHHHHHHHHhcCceEEEEcccchHHHHhhhhhc--Cc-eEEEeCCCC-----------CCcc
Q 014952 95 LGASYIGATSTTANPFYTPPEIAKQAIASKAKIIITQAVYNDKVRDLSEHH--GA-RIVTIDPPP-----------ENCL 160 (415)
Q Consensus 95 lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~vl~~~~~~~~~~~~~~~~--~~-~~i~~~~~~-----------~~~~ 160 (415)
|||+++|++++|+++.++.+++.+++++++++++|++++..+.+....... .. .++.+++.. ....
T Consensus 120 lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~~~v~~~~~~~~~~~~~~~~~~~~l~~ii~~~~~~~~~~~~~~~~~~~~~ 199 (660)
T PLN02861 120 EACNSQGITYVPLYDTLGANAVEFIINHAEVSIAFVQESKISSILSCLPKCSSNLKTIVSFGDVSSEQKEEAEELGVSCF 199 (660)
T ss_pred HHHHHcCCeEEEecCCCCHHHHHHHHHcCCCCEEEECHHHHHHHHHhhhhCCCCCEEEEEECCCChhhhhhhhcCCcEEE
Confidence 999999999999999999999999999999999999877655554433221 22 345554321 0123
Q ss_pred chhhhhhhcccCCCCcccCCCCCeEEEecCCCCCCCCceeeechHHHHHHHhhhhcCCCC-CccCCCCcEEEEccchHHH
Q 014952 161 HFSELITQADENEIPAVKINPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENP-NLYLHKEDVILCVLPLFHI 239 (415)
Q Consensus 161 ~~~~l~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~pl~~~ 239 (415)
+++++..... .........++++++|+|||||||.||||++||++++............ ...+.++|++++++|++|.
T Consensus 200 ~~~~~~~~~~-~~~~~~~~~~dd~a~i~yTSGTTG~PKGV~lth~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~lPl~H~ 278 (660)
T PLN02861 200 SWEEFSLMGS-LDCELPPKQKTDICTIMYTSGTTGEPKGVILTNRAIIAEVLSTDHLLKVTDRVATEEDSYFSYLPLAHV 278 (660)
T ss_pred EHHHHHHhCc-ccCCCCccCCCceEEEEecCCCCCCCCEEEEecHHHHHHHHHHHhccccccccCCCCCEEEEECcHHHH
Confidence 4555532221 1122234567999999999999999999999999999877655442210 0124678999999999999
Q ss_pred HhhHHHHHHHHHcCcEEEEcCCCCHHHHHHHHHhcCceeeecchHHHHHHHcC---------------------------
Q 014952 240 YSLNSVLLCALRVGAAILIMQKFDIVKLMELVQKYKVTVAPFVPPIVLAVAKS--------------------------- 292 (415)
Q Consensus 240 ~g~~~~~l~~l~~G~~~v~~~~~~~~~~~~~l~~~~~t~l~~~p~~l~~l~~~--------------------------- 292 (415)
++... .+.++..|+++++.+ +++..+++.+++++||+++++|.++..+.+.
T Consensus 279 ~~~~~-~~~~l~~G~~v~~~~-~~~~~~~~~i~~~~~T~~~~vP~~~~~l~~~~~~~~~~~~~~~~~l~~~a~~~~~~~~ 356 (660)
T PLN02861 279 YDQVI-ETYCISKGASIGFWQ-GDIRYLMEDVQALKPTIFCGVPRVYDRIYTGIMQKISSGGMLRKKLFDFAYNYKLGNL 356 (660)
T ss_pred HHHHH-HHHHHHhCCEEEEeC-CCHHHHHHHHHHhCCcEEeechHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHH
Confidence 99874 556899999998874 6899999999999999999999999888641
Q ss_pred ----------CCCCCC-------Cc-ccceeeeecCCCCCHHHHHHHHhhCCCCccccccccccCCccccccccccCCcc
Q 014952 293 ----------GDVDKY-------DM-SSIRTVMSGAAPMGKELEDAVRAKLPHAKLGQGYGMTEAGPVLSMCLAFAKEPF 354 (415)
Q Consensus 293 ----------~~~~~~-------~l-~~lr~v~~gG~~l~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~ 354 (415)
+..+.. .+ +++|.+++||+++++++.+ +.+.++...+++.||+||+++.++... ...
T Consensus 357 ~~~~~~~~~~~~~~~~~~~~~r~~lg~~lr~~~~Ggapl~~~~~~-~~~~~~~~~l~~~YG~TE~~~~~~~~~----~~~ 431 (660)
T PLN02861 357 RKGLKQEEASPRLDRLVFDKIKEGLGGRVRLLLSGAAPLPRHVEE-FLRVTSCSVLSQGYGLTESCGGCFTSI----ANV 431 (660)
T ss_pred hcCCCCcCccHhHHHHHHHHHHHHhCCcEEEEEECCCCCCHHHHH-HHHHHcCCCeeEecchhhhhhceeecc----ccc
Confidence 000000 01 5899999999999999754 666664457999999999986544321 111
Q ss_pred ccCCCcccccccCCeEEEEeC-CCC-CCCCCCCceeEEEecCccccccccCCcceeeee
Q 014952 355 EIKSGACGTVVRNAEMKIVDP-DTG-ISLPRNQAGEICIRGAQIMKGTYHIYAPFLLSI 411 (415)
Q Consensus 355 ~~~~~~~G~p~~~~~v~i~d~-~~~-~~~~~g~~Gel~v~~~~~~~gY~~~~~~~~~~~ 411 (415)
....+++|+|+|+++++|+|. ++| ..++.++.|||+|+||+++.|||++|++|.++|
T Consensus 432 ~~~~gsvG~p~p~~ev~i~d~~~~g~~~~~~~~~GEi~vrGp~v~~GY~~~pe~T~~~f 490 (660)
T PLN02861 432 FSMVGTVGVPMTTIEARLESVPEMGYDALSDVPRGEICLRGNTLFSGYHKRQDLTEEVL 490 (660)
T ss_pred CCCCCCccCccCceEEEEEEccccCcccCCCCCceeEEEcCCcccccccCCHHHHHhhh
Confidence 234689999999999999983 334 445667789999999999999999999998876
No 14
>PLN02330 4-coumarate--CoA ligase-like 1
Probab=100.00 E-value=2e-51 Score=406.27 Aligned_cols=400 Identities=33% Similarity=0.564 Sum_probs=326.1
Q ss_pred ccccceeecCCCCCCCCCCCCHHhHHHhhhccCCCCcEEEeCCCCCeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcC
Q 014952 6 DHQEFIFRSKLPDIYIPNHLPLHTYCFENISQFADRPCIINGPTGDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQ 85 (415)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~tl~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~ 85 (415)
+....+..+..++...++..|+.+.+.++++++|+++|+++...++.+||.||.++++++|+.|.+.|+++||+|+++++
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~i~~~ 88 (546)
T PLN02330 9 EDNEHIFRSRYPSVPVPDKLTLPDFVLQDAELYADKVAFVEAVTGKAVTYGEVVRDTRRFAKALRSLGLRKGQVVVVVLP 88 (546)
T ss_pred cccceeeccCCCCCCCCCCCcHHHHHhhhhhcCCCccEEEecCCCCcccHHHHHHHHHHHHHHHHHhCCCCCCEEEEECC
Confidence 35556777778888777789999999999999999999998655789999999999999999999999999999999999
Q ss_pred CchhHHHHHHHHHHhCCeEeecCCCCCHHHHHHHHHhcCceEEEEcccchHHHHhhhhhcCceEEEeCCC-CCCccchhh
Q 014952 86 NCPQFVFAFLGASYIGATSTTANPFYTPPEIAKQAIASKAKIIITQAVYNDKVRDLSEHHGARIVTIDPP-PENCLHFSE 164 (415)
Q Consensus 86 ~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~i~~~~~-~~~~~~~~~ 164 (415)
|+.+++++++||+++|++++|+++..+.+++.++++.+++.++++++...+.+... ...++.++.. ......+++
T Consensus 89 ~~~~~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~~----~~~~i~~~~~~~~~~~~~~~ 164 (546)
T PLN02330 89 NVAEYGIVALGIMAAGGVFSGANPTALESEIKKQAEAAGAKLIVTNDTNYGKVKGL----GLPVIVLGEEKIEGAVNWKE 164 (546)
T ss_pred CchHHHHHHHHHHHhCcEeccCCccCCHHHHHHHHHhcCCeEEEEccchhhhHhhc----CCcEEEecCCCCCCcccHHH
Confidence 99999999999999999999999999999999999999999999998877766543 3445555432 223344555
Q ss_pred hhhhcccC--CCCcccCCCCCeEEEecCCCCCCCCceeeechHHHHHHHhhhhcCCCCCccCCCCcEEEEccchHHHHhh
Q 014952 165 LITQADEN--EIPAVKINPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSL 242 (415)
Q Consensus 165 l~~~~~~~--~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~ 242 (415)
++...... ..+.....+++.++|+|||||||.||+|.++|.++..+......... ......+..+..+|++|.+++
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~a~il~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~~--~~~~~~~~~~~~~p~~h~~g~ 242 (546)
T PLN02330 165 LLEAADRAGDTSDNEEILQTDLCALPFSSGTTGISKGVMLTHRNLVANLCSSLFSVG--PEMIGQVVTLGLIPFFHIYGI 242 (546)
T ss_pred HHhhccccCcccccccCCcccEEEEEeCCCCcCCCcEEEEehHHHHHHHHHHhhccC--ccccCceEEEEecChHHHHHH
Confidence 53222111 11223345689999999999999999999999999876554322111 112245688999999999998
Q ss_pred HHHHHHHHHcCcEEEEcCCCCHHHHHHHHHhcCceeeecchHHHHHHHcCCCCCCCCcc--cceeeeecCCCCCHHHHHH
Q 014952 243 NSVLLCALRVGAAILIMQKFDIVKLMELVQKYKVTVAPFVPPIVLAVAKSGDVDKYDMS--SIRTVMSGAAPMGKELEDA 320 (415)
Q Consensus 243 ~~~~l~~l~~G~~~v~~~~~~~~~~~~~l~~~~~t~l~~~p~~l~~l~~~~~~~~~~l~--~lr~v~~gG~~l~~~~~~~ 320 (415)
...++.++..|+++++.+.+++..+++.++++++|++.++|+++..+++.......++. ++|.+++||+++++++.++
T Consensus 243 ~~~~~~~l~~g~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~l~~i~~~g~~l~~~~~~~ 322 (546)
T PLN02330 243 TGICCATLRNKGKVVVMSRFELRTFLNALITQEVSFAPIVPPIILNLVKNPIVEEFDLSKLKLQAIMTAAAPLAPELLTA 322 (546)
T ss_pred HHHHHHHhhcCCEEEEecccCHHHHHHHHHHcCCeeeecCCHHHHHHHhCccccccccchheeeeEEEcCCcCCHHHHHH
Confidence 76678889999999999999999999999999999999999999999887654444444 4789999999999999999
Q ss_pred HHhhCCCCccccccccccCCccccccccccCCccccCCCcccccccCCeEEEEeCCCCCCCCCCCceeEEEecCcccccc
Q 014952 321 VRAKLPHAKLGQGYGMTEAGPVLSMCLAFAKEPFEIKSGACGTVVRNAEMKIVDPDTGISLPRNQAGEICIRGAQIMKGT 400 (415)
Q Consensus 321 ~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~G~p~~~~~v~i~d~~~~~~~~~g~~Gel~v~~~~~~~gY 400 (415)
+.+.|++.++++.||+||++++...+............+++|+|+|+++++|+|++++++++.|+.|||+|+|+.++.||
T Consensus 323 ~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~v~i~d~~~~~~~p~g~~Gel~v~g~~~~~gy 402 (546)
T PLN02330 323 FEAKFPGVQVQEAYGLTEHSCITLTHGDPEKGHGIAKKNSVGFILPNLEVKFIDPDTGRSLPKNTPGELCVRSQCVMQGY 402 (546)
T ss_pred HHHHcCCCeEEecccccccccceecCCCccccccccccCccccccCCcEEEEEeCCCCccCCCCCceEEEEecchhhhhh
Confidence 99999889999999999998654322110111112345689999999999999988899999999999999999999999
Q ss_pred ccCCcceeeee
Q 014952 401 YHIYAPFLLSI 411 (415)
Q Consensus 401 ~~~~~~~~~~~ 411 (415)
+++++.+...|
T Consensus 403 ~~~~~~~~~~~ 413 (546)
T PLN02330 403 YNNKEETDRTI 413 (546)
T ss_pred ccCccchhhhc
Confidence 99998876543
No 15
>PRK07788 acyl-CoA synthetase; Validated
Probab=100.00 E-value=6.5e-52 Score=410.12 Aligned_cols=366 Identities=23% Similarity=0.333 Sum_probs=309.1
Q ss_pred CCHHhHHHhhhccCCCCcEEEeCCCCCeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHHhCCeE
Q 014952 25 LPLHTYCFENISQFADRPCIINGPTGDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGATS 104 (415)
Q Consensus 25 ~tl~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~ 104 (415)
.++.+.+.+.++++|+++|+++. ++.+||+||.++++++|+.|.++|+++||+|+++++|+.++++++|||+++|+++
T Consensus 49 ~~~~~~~~~~a~~~pd~~Al~~~--~~~~Ty~el~~~~~~la~~L~~~gi~~gd~V~i~~~n~~~~~~~~la~~~~G~~~ 126 (549)
T PRK07788 49 GPFAGLVAHAARRAPDRAALIDE--RGTLTYAELDEQSNALARGLLALGVRAGDGVAVLARNHRGFVLALYAAGKVGARI 126 (549)
T ss_pred chHHHHHHHHHHHCCCceEEEEC--CCceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHhcCCEE
Confidence 48999999999999999999987 7899999999999999999999999999999999999999999999999999999
Q ss_pred eecCCCCCHHHHHHHHHhcCceEEEEcccchHHHHhhhhhc-CceEEEeCCC-----CCCccchhhhhhhcccCCCCccc
Q 014952 105 TTANPFYTPPEIAKQAIASKAKIIITQAVYNDKVRDLSEHH-GARIVTIDPP-----PENCLHFSELITQADENEIPAVK 178 (415)
Q Consensus 105 v~l~~~~~~~~~~~~l~~~~~~~vl~~~~~~~~~~~~~~~~-~~~~i~~~~~-----~~~~~~~~~l~~~~~~~~~~~~~ 178 (415)
+|+++.++.+++.++++++++++++++.+..+.+....... ....+..... ......++++...... ...+
T Consensus 127 v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~ 203 (549)
T PRK07788 127 ILLNTGFSGPQLAEVAAREGVKALVYDDEFTDLLSALPPDLGRLRAWGGNPDDDEPSGSTDETLDDLIAGSST---APLP 203 (549)
T ss_pred EEeCCCCCHHHHHHHHHhcCCcEEEECchhHHHHHhhccccccceEEEEecCccccCCcCcccHHHHhcCCCC---CCCC
Confidence 99999999999999999999999999988777665542221 2333322111 1234566666322221 1122
Q ss_pred CCCCCeEEEecCCCCCCCCceeeechHHHHHHHhhhhcCCCCCccCCCCcEEEEccchHHHHhhHHHHHHHHHcCcEEEE
Q 014952 179 INPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILI 258 (415)
Q Consensus 179 ~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~l~~l~~G~~~v~ 258 (415)
...++.++|+|||||||.||+|.++|+++......... .+.+.++++++...|++|.+|+. .++.++..|+++++
T Consensus 204 ~~~~~~~~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~----~~~~~~~d~~~~~~p~~~~~g~~-~~~~~l~~G~~~v~ 278 (549)
T PRK07788 204 KPPKPGGIVILTSGTTGTPKGAPRPEPSPLAPLAGLLS----RVPFRAGETTLLPAPMFHATGWA-HLTLAMALGSTVVL 278 (549)
T ss_pred CCCCCCcEEEECCCCCCCCCEEeccCccHHHHHHHHHh----hCCCCcCCeEEEccchHHHHHHH-HHHHHHHhCCEEEE
Confidence 34567899999999999999999999999988777665 44577889999999999999987 46778999999999
Q ss_pred cCCCCHHHHHHHHHhcCceeeecchHHHHHHHcCCCC--CCCCcccceeeeecCCCCCHHHHHHHHhhCCCCcccccccc
Q 014952 259 MQKFDIVKLMELVQKYKVTVAPFVPPIVLAVAKSGDV--DKYDMSSIRTVMSGAAPMGKELEDAVRAKLPHAKLGQGYGM 336 (415)
Q Consensus 259 ~~~~~~~~~~~~l~~~~~t~l~~~p~~l~~l~~~~~~--~~~~l~~lr~v~~gG~~l~~~~~~~~~~~~~~~~~~~~YG~ 336 (415)
.+.+++..+++.++++++|++.++|+++..+++.... ...++++||.+++||+++++++.+++.+.| +..+++.||+
T Consensus 279 ~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~-~~~l~~~YG~ 357 (549)
T PRK07788 279 RRRFDPEATLEDIAKHKATALVVVPVMLSRILDLGPEVLAKYDTSSLKIIFVSGSALSPELATRALEAF-GPVLYNLYGS 357 (549)
T ss_pred CCCCCHHHHHHHHHHhCCcEEEEHHHHHHHHHhCcccccCCCCCCceeEEEEeCCCCCHHHHHHHHHHh-CccceeccCc
Confidence 9889999999999999999999999999999887654 456689999999999999999999999999 7889999999
Q ss_pred ccCCccccccccccCCccccCCCcccccccCCeEEEEeCCCCCCCCCCCceeEEEecCccccccccCCcc
Q 014952 337 TEAGPVLSMCLAFAKEPFEIKSGACGTVVRNAEMKIVDPDTGISLPRNQAGEICIRGAQIMKGTYHIYAP 406 (415)
Q Consensus 337 tE~~~~~~~~~~~~~~~~~~~~~~~G~p~~~~~v~i~d~~~~~~~~~g~~Gel~v~~~~~~~gY~~~~~~ 406 (415)
||++...... .......++++|+|+++++++|+| +++++++.|+.|||+++|+.++.||++++..
T Consensus 358 TE~~~~~~~~----~~~~~~~~~~vG~~~~~~~~~i~d-~~~~~~~~g~~Gel~v~g~~~~~gY~~~~~~ 422 (549)
T PRK07788 358 TEVAFATIAT----PEDLAEAPGTVGRPPKGVTVKILD-ENGNEVPRGVVGRIFVGNGFPFEGYTDGRDK 422 (549)
T ss_pred chhchhhccC----hhhhhhcCCCcccCCCCcEEEEEC-CCcCCCCCCCeEEEEEeCCCccccccCCCcc
Confidence 9998543322 112234567899999999999999 5589999999999999999999999998865
No 16
>PF00501 AMP-binding: AMP-binding enzyme; InterPro: IPR000873 A number of prokaryotic and eukaryotic enzymes, which appear to act via an ATP-dependent covalent binding of AMP to their substrate, share a region of sequence similarity [, , ]. This region is a Ser/Thr/Gly-rich domain that is further characterised by a conserved Pro-Lys-Gly triplet. The family of enzymes includes luciferase, long chain fatty acid Co-A ligase, acetyl-CoA synthetase and various other closely-related synthetases.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 2V7B_A 2Y4O_B 2VSQ_A 3L8C_B 1RY2_A 3KXW_A 3LNV_A 3ETC_B 3A9U_A 3A9V_A ....
Probab=100.00 E-value=2.8e-53 Score=406.19 Aligned_cols=370 Identities=34% Similarity=0.495 Sum_probs=295.3
Q ss_pred HHhhhccCCCCcEEEeCCCCCeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHHhCCeEeecCCC
Q 014952 31 CFENISQFADRPCIINGPTGDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGATSTTANPF 110 (415)
Q Consensus 31 l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~ 110 (415)
|+++|+++|+++|+++ +.++.+||+||.++++++|..|+++|+++||+|+++++|+.+++++++||+++|++++|++|.
T Consensus 1 f~~~a~~~pd~~a~~~-~~~~~~Ty~~l~~~v~~la~~L~~~g~~~~~~V~i~~~n~~~~~~~~~A~~~~G~~~v~l~~~ 79 (417)
T PF00501_consen 1 FERQAQRYPDRIALID-DEGRSLTYKQLYERVRKLAAALRKLGVKKGDRVAILLPNSIEFVVAFLACLRAGAIPVPLDPS 79 (417)
T ss_dssp HHHHHHHSTTSEEEEE-TTTEEEEHHHHHHHHHHHHHHHHHTTSSTTSEEEEEESSSHHHHHHHHHHHHTT-EEEEEETT
T ss_pred ChhHHhhCCCceEEEE-CCCEEEEHHHHHHHHHHHhhHHHHhCCCccccccccCCccceeeeeecccccccccccccccc
Confidence 5789999999999999 348999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHhcCceEEEE----cccchHHHHhhhhhc--CceEEEeCCCCCCccchhhhhhhcccCCCCccc-CCCCC
Q 014952 111 YTPPEIAKQAIASKAKIIIT----QAVYNDKVRDLSEHH--GARIVTIDPPPENCLHFSELITQADENEIPAVK-INPDD 183 (415)
Q Consensus 111 ~~~~~~~~~l~~~~~~~vl~----~~~~~~~~~~~~~~~--~~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~~~-~~~~~ 183 (415)
++.+++.++++.++++++++ +......+....... ...++.++....... +.+ ............ ..+++
T Consensus 80 ~~~~~~~~~l~~~~~~~ii~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-~~~~~~~~~~~~~~~~~~ 156 (417)
T PF00501_consen 80 LSEDELRHILRQSGPKVIITSEAVDSEPLKKLKSIFKQEDPSSSIIILDRDDLPKK--EAL-KSASLSDEPQSPEDSPDD 156 (417)
T ss_dssp SSHHHHHHHHHHHTESEEEECHHHSCHHHHHHHHHHTTSTTTEEEEEESHSSCTTC--HHH-HHHHHCHCSHSTTHTTTS
T ss_pred cccccccccccccceeEEEEeccccccccccchhhhcccccccccccccccccccc--ccc-cccccccccccCCCCccc
Confidence 99999999999999999997 222222233332221 133555553221111 111 000000000000 05699
Q ss_pred eEEEecCCCCCCCCceeeechHHHHHHHhhhh-cCCCCCccCCCCcEEEEccchHHHHhhHHHHHHHHHcCcEEEEcCCC
Q 014952 184 VVALPYSSGTTGLPKGVMLTHKGLVTSVAQQV-DGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIMQKF 262 (415)
Q Consensus 184 ~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~l~~l~~G~~~v~~~~~ 262 (415)
+++++|||||||.||+|.++|+++.+.+.... .. ....+ +++++.+|++|.+|++..++.++..|+++++.+..
T Consensus 157 ~~~i~~TSGTTG~pK~v~~t~~~~~~~~~~~~~~~---~~~~~--d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~ 231 (417)
T PF00501_consen 157 PAFILFTSGTTGKPKGVVLTHRNLLAQARALALPE---YFGLG--DRILSFLPLSHIFGLISALLAALFSGATLVLPSPF 231 (417)
T ss_dssp EEEEEEESSSSSSEEEEEEEHHHHHHHHHHHHHHH---TTTTT--TEEEESS-TTSHHHHHHHHHHHHHCTSEEEEESSH
T ss_pred eeEeecccccccccccccccccccccccccccccc---ccccC--ceEEeeccccccccccccccccccccccccccccc
Confidence 99999999999999999999999999877754 10 11122 69999999999999955799999999999999875
Q ss_pred C---HHHHHHHHHhcCceeeecchHHHHHHHcCCCC----CCCCcccceeeeecCCCCCHHHHHHHHhhCCCCccccccc
Q 014952 263 D---IVKLMELVQKYKVTVAPFVPPIVLAVAKSGDV----DKYDMSSIRTVMSGAAPMGKELEDAVRAKLPHAKLGQGYG 335 (415)
Q Consensus 263 ~---~~~~~~~l~~~~~t~l~~~p~~l~~l~~~~~~----~~~~l~~lr~v~~gG~~l~~~~~~~~~~~~~~~~~~~~YG 335 (415)
. ++.+++.++++++|++.++|.++..+++..+. ...+++++|.+++||+++++++.+++++.++...+++.||
T Consensus 232 ~~~~~~~~~~~i~~~~~t~~~~~p~~l~~l~~~~~~~~~~~~~~l~~lr~v~~~G~~l~~~~~~~~~~~~~~~~i~~~YG 311 (417)
T PF00501_consen 232 DLFDPESLLELISRYKPTILFAVPSMLEALLQSPEEKTKISKKDLSSLRTVISGGEPLPPDLLRRLRKAFGNAPIINLYG 311 (417)
T ss_dssp HHHHHHHHHHHHHHHTESEEEEEHHHHHHHHHHHHTTHHGTTTTGTT-SEEEEESST-CHHHHHHHHHHHTTSEEEEEEE
T ss_pred cccccccchhcccccccccccccccccccccccccccccccccccccccccccccccCChhhccccccccccccceeccc
Confidence 4 46789999999999999999999999884322 2457889999999999999999999999995558999999
Q ss_pred cccCCccccccccccCCccccCCCcccccccCCeEEEEeCCCCCCCCCCCceeEEEecCccccccccCCcceeeeee
Q 014952 336 MTEAGPVLSMCLAFAKEPFEIKSGACGTVVRNAEMKIVDPDTGISLPRNQAGEICIRGAQIMKGTYHIYAPFLLSIV 412 (415)
Q Consensus 336 ~tE~~~~~~~~~~~~~~~~~~~~~~~G~p~~~~~v~i~d~~~~~~~~~g~~Gel~v~~~~~~~gY~~~~~~~~~~~~ 412 (415)
+||++.++.... ........+++|+|+|+++++|+|++++++++.|+.|||+|+||+++.||+++|+.+..+|.
T Consensus 312 ~tE~~~~~~~~~---~~~~~~~~~~~G~~~~~~~~~ivd~~~~~~~~~g~~Gei~i~~~~~~~gy~~~~~~~~~~~~ 385 (417)
T PF00501_consen 312 STETGSIATIRP---PEDDIEKPGSVGKPLPGVEVKIVDPNTGEPLPPGEPGEIVIRGPNVFSGYYNDPELTAEAFI 385 (417)
T ss_dssp EGGGSSEEEEEE---TTTHHSSTTSEBEESTTEEEEEECTTTSSBESTTSEEEEEEESTTSBSEETTBHHHHHHHEE
T ss_pred ccccceeeeccc---ccccccccccccccccccccccccccccccccccccccccccCCccceeeeccccccccccc
Confidence 999998765431 12334567889999999999999988899999999999999999999999999988888765
No 17
>PRK08314 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=1.5e-51 Score=407.70 Aligned_cols=375 Identities=26% Similarity=0.428 Sum_probs=318.9
Q ss_pred CCCHHhHHHhhhccCCCCcEEEeCCCCCeeeHHHHHHHHHHHHHHHHHc-CCCCCCEEEEEcCCchhHHHHHHHHHHhCC
Q 014952 24 HLPLHTYCFENISQFADRPCIINGPTGDVYTYADVELTSRKVAAGLSKL-GVQKGDVIMLLLQNCPQFVFAFLGASYIGA 102 (415)
Q Consensus 24 ~~tl~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~~a~~L~~~-g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~ 102 (415)
+.|+.+.|.+.++++|+++|+++. ++.+||+||.++++++|+.|.++ |+++||+|+++++|+.+++++++||+++|+
T Consensus 9 ~~tl~~~l~~~a~~~~~~~a~~~~--~~~~Ty~~l~~~v~~~a~~L~~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~ 86 (546)
T PRK08314 9 ETSLFHNLEVSARRYPDKTAIVFY--GRAISYRELLEEAERLAGYLQQECGVRKGDRVLLYMQNSPQFVIAYYAILRANA 86 (546)
T ss_pred CCCHHHHHHHHHHHcCCCcceeec--CceecHHHHHHHHHHHHHHHHHhhCCCCCCEEEEECCCChHHHHHHHHHHHcCc
Confidence 579999999999999999999987 78999999999999999999999 999999999999999999999999999999
Q ss_pred eEeecCCCCCHHHHHHHHHhcCceEEEEcccchHHHHhhhhhcCce-EEEeCCC-------------------------C
Q 014952 103 TSTTANPFYTPPEIAKQAIASKAKIIITQAVYNDKVRDLSEHHGAR-IVTIDPP-------------------------P 156 (415)
Q Consensus 103 ~~v~l~~~~~~~~~~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~-~i~~~~~-------------------------~ 156 (415)
+++|+++..+.+++..+++.+++++++++.+..+.+.........+ ++..+.. .
T Consensus 87 ~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (546)
T PRK08314 87 VVVPVNPMNREEELAHYVTDSGARVAIVGSELAPKVAPAVGNLRLRHVIVAQYSDYLPAEPEIAVPAWLRAEPPLQALAP 166 (546)
T ss_pred EEeecCcCcCHHHHHHHHHhCCCeEEEEccchhhhHHHHhhccCcceEEEecchhhcccccccCcccccccccccccccc
Confidence 9999999999999999999999999999988777665543322222 2221100 0
Q ss_pred CCccchhhhhhhcccCCCCcccCCCCCeEEEecCCCCCCCCceeeechHHHHHHHhhhhcCCCCCccCCCCcEEEEccch
Q 014952 157 ENCLHFSELITQADENEIPAVKINPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPL 236 (415)
Q Consensus 157 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pl 236 (415)
.+...+++..... . ........++++++|+|||||||.||+|.++|+++..++..... .+.+.+.|++++.+|+
T Consensus 167 ~~~~~~~~~~~~~-~-~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~----~~~~~~~d~~l~~~p~ 240 (546)
T PRK08314 167 GGVVAWKEALAAG-L-APPPHTAGPDDLAVLPYTSGTTGVPKGCMHTHRTVMANAVGSVL----WSNSTPESVVLAVLPL 240 (546)
T ss_pred cccccHHHHhccc-C-CCCCCCCCCCCeEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHH----hhCCCCCceEEEEcCc
Confidence 1122344432111 1 11233456789999999999999999999999999988877665 4457889999999999
Q ss_pred HHHHhhHHHHHHHHHcCcEEEEcCCCCHHHHHHHHHhcCceeeecchHHHHHHHcCCCCCCCCcccceeeeecCCCCCHH
Q 014952 237 FHIYSLNSVLLCALRVGAAILIMQKFDIVKLMELVQKYKVTVAPFVPPIVLAVAKSGDVDKYDMSSIRTVMSGAAPMGKE 316 (415)
Q Consensus 237 ~~~~g~~~~~l~~l~~G~~~v~~~~~~~~~~~~~l~~~~~t~l~~~p~~l~~l~~~~~~~~~~l~~lr~v~~gG~~l~~~ 316 (415)
+|.+|+...++.++..|+++++.+.+++..+++.++++++|++.++|.++..+++.......+++++|.+++||++++.+
T Consensus 241 ~~~~g~~~~~~~~l~~G~~i~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~ll~~~~~~~~~~~~l~~~~~gG~~~~~~ 320 (546)
T PRK08314 241 FHVTGMVHSMNAPIYAGATVVLMPRWDREAAARLIERYRVTHWTNIPTMVVDFLASPGLAERDLSSLRYIGGGGAAMPEA 320 (546)
T ss_pred hHHHHHHHHHHHHHHcCCeEEecCCCCHHHHHHHHHHhcCceecccHHHHHHHHhCCCccccCchhhheeeeccccCCHH
Confidence 99999887788999999999999989999999999999999999999999999877655666788999999999999999
Q ss_pred HHHHHHhhCCCCccccccccccCCccccccccccCCccccCCCcccccccCCeEEEEeCCCCCCCCCCCceeEEEecCcc
Q 014952 317 LEDAVRAKLPHAKLGQGYGMTEAGPVLSMCLAFAKEPFEIKSGACGTVVRNAEMKIVDPDTGISLPRNQAGEICIRGAQI 396 (415)
Q Consensus 317 ~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~G~p~~~~~v~i~d~~~~~~~~~g~~Gel~v~~~~~ 396 (415)
+.+++.+.+ +.++++.||+||++...... .......+++|+|+++++++|+|++++++++.|+.|||+|+|+++
T Consensus 321 ~~~~~~~~~-~~~~~~~YG~tE~~~~~~~~-----~~~~~~~~~~G~~~~g~~~~i~d~~~~~~~~~g~~Gel~v~g~~~ 394 (546)
T PRK08314 321 VAERLKELT-GLDYVEGYGLTETMAQTHSN-----PPDRPKLQCLGIPTFGVDARVIDPETLEELPPGEVGEIVVHGPQV 394 (546)
T ss_pred HHHHHHHHc-CCcEEecccccccccceecC-----CCcCCCCCccCcccCCeEEEEEeCCCCcCCCCCCceEEEEECCch
Confidence 999999999 78999999999998655433 122334578999999999999998889999999999999999999
Q ss_pred ccccccCCcceeeeee
Q 014952 397 MKGTYHIYAPFLLSIV 412 (415)
Q Consensus 397 ~~gY~~~~~~~~~~~~ 412 (415)
+.||+++++.++..|.
T Consensus 395 ~~gY~~~~~~t~~~f~ 410 (546)
T PRK08314 395 FKGYWNRPEATAEAFI 410 (546)
T ss_pred hccccCChhHhhhhhh
Confidence 9999999999887763
No 18
>PLN02387 long-chain-fatty-acid-CoA ligase family protein
Probab=100.00 E-value=2.6e-52 Score=420.81 Aligned_cols=381 Identities=25% Similarity=0.302 Sum_probs=299.7
Q ss_pred CCCCCHHhHHHhhhccCCCCcEEEeC----------CCC-----------CeeeHHHHHHHHHHHHHHHHHcCCCCCCEE
Q 014952 22 PNHLPLHTYCFENISQFADRPCIING----------PTG-----------DVYTYADVELTSRKVAAGLSKLGVQKGDVI 80 (415)
Q Consensus 22 ~~~~tl~~~l~~~a~~~p~~~a~~~~----------~~~-----------~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V 80 (415)
|+-.|+.++|.+.++.+|+++|+... .++ ..+||+|+.++++++|++|.++|+++||+|
T Consensus 55 ~~~~t~~~l~~~~~~~~pd~~al~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~lG~~~gd~V 134 (696)
T PLN02387 55 EGATTLAALFEQSCKKYSDKRLLGTRKLISREFETSSDGRKFEKLHLGEYEWITYGQVFERVCNFASGLVALGHNKEERV 134 (696)
T ss_pred CCCCCHHHHHHHHHHHCCCCceEEEecccccccccccCCcccccccCCCcEEEEHHHHHHHHHHHHHHHHHhCCCCCCEE
Confidence 45679999999999999999999532 012 238999999999999999999999999999
Q ss_pred EEEcCCchhHHHHHHHHHHhCCeEeecCCCCCHHHHHHHHHhcCceEEEEcccchHHHHhhhhhcC--ceEEEeCCCCC-
Q 014952 81 MLLLQNCPQFVFAFLGASYIGATSTTANPFYTPPEIAKQAIASKAKIIITQAVYNDKVRDLSEHHG--ARIVTIDPPPE- 157 (415)
Q Consensus 81 ~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~--~~~i~~~~~~~- 157 (415)
+|+++|+.+|+++.+||+++|++++|+++.++.+++.+++++++++++|++.+..+.+........ ..++.+++...
T Consensus 135 ai~~~n~~e~~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~~~li~~~~~~~~l~~~~~~~~~l~~ii~~~~~~~~ 214 (696)
T PLN02387 135 AIFADTRAEWLIALQGCFRQNITVVTIYASLGEEALCHSLNETEVTTVICDSKQLKKLIDISSQLETVKRVIYMDDEGVD 214 (696)
T ss_pred EEEcCCCHHHHHHHHHHHHcCCeEEEecCCCCHHHHHHHHHccCCCEEEECHHHHHHHHHHhhccCCceEEEEECCCCch
Confidence 999999999999999999999999999999999999999999999999999877776655543322 34666654221
Q ss_pred -----------CccchhhhhhhcccCCCCcccCCCCCeEEEecCCCCCCCCceeeechHHHHHHHhhhhcCCCCCccCCC
Q 014952 158 -----------NCLHFSELITQADENEIPAVKINPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHK 226 (415)
Q Consensus 158 -----------~~~~~~~l~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~ 226 (415)
....++++.........+.....++++++|+|||||||.||||++||+++..++....... ..+.+
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dd~a~I~yTSGTTG~PKGV~lth~~l~~~~~~~~~~~---~~~~~ 291 (696)
T PLN02387 215 SDSSLSGSSNWTVSSFSEVEKLGKENPVDPDLPSPNDIAVIMYTSGSTGLPKGVMMTHGNIVATVAGVMTVV---PKLGK 291 (696)
T ss_pred hhhhhhccCCcEEEEHHHHHHhhccCCCCCCCCCccceEEEEecCCCCCCCCEEEEEcHHHHHHHHHHHhhc---CCCCC
Confidence 1234555532222222223345679999999999999999999999999998877665422 24678
Q ss_pred CcEEEEccchHHHHhhHHHHHHHHHcCcEEEEcCCCC--------HHHHHHHHHhcCceeeecchHHHHHHHcCCCC---
Q 014952 227 EDVILCVLPLFHIYSLNSVLLCALRVGAAILIMQKFD--------IVKLMELVQKYKVTVAPFVPPIVLAVAKSGDV--- 295 (415)
Q Consensus 227 ~~~~~~~~pl~~~~g~~~~~l~~l~~G~~~v~~~~~~--------~~~~~~~l~~~~~t~l~~~p~~l~~l~~~~~~--- 295 (415)
+|++++++|++|++++.. ....+..|+++.+..... +..+++.++++++|++.++|.++..+.+....
T Consensus 292 ~d~~l~~lPl~Hi~~~~~-~~~~~~~g~~i~~g~~~~l~~~~~~~~~~~~~~i~~~~pT~~~~vP~~l~~l~~~~~~~~~ 370 (696)
T PLN02387 292 NDVYLAYLPLAHILELAA-ESVMAAVGAAIGYGSPLTLTDTSNKIKKGTKGDASALKPTLMTAVPAILDRVRDGVRKKVD 370 (696)
T ss_pred CCEEEEECcHHHHHHHHH-HHHHHHhCCEEEECChhhhcccccccccCchhhHHHhCCcEEEehhHHHHHHHHHHHHHHh
Confidence 999999999999999874 455677888887654321 23456789999999999999999888642100
Q ss_pred -------------------------------CC-------------CCcccceeeeecCCCCCHHHHHHHHhhCCCCccc
Q 014952 296 -------------------------------DK-------------YDMSSIRTVMSGAAPMGKELEDAVRAKLPHAKLG 331 (415)
Q Consensus 296 -------------------------------~~-------------~~l~~lr~v~~gG~~l~~~~~~~~~~~~~~~~~~ 331 (415)
.. ...+++|.+++||+++++++.+.++..+ ++.++
T Consensus 371 ~~~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~lr~i~~GGapl~~~~~~~~~~~~-g~~v~ 449 (696)
T PLN02387 371 AKGGLAKKLFDIAYKRRLAAIEGSWFGAWGLEKLLWDALVFKKIRAVLGGRIRFMLSGGAPLSGDTQRFINICL-GAPIG 449 (696)
T ss_pred cccHHHHHHHHHHHHHHHHHhccCCcccccccchhhHHHHHHHHHHHhCCcEEEEEEcCCCCCHHHHHHHHHHc-CCCee
Confidence 00 0015899999999999999998888888 89999
Q ss_pred cccccccCCccccccccccCCccccCCCcccccccCCeEEEEeCCCCC-CC--CCCCceeEEEecCccccccccCCccee
Q 014952 332 QGYGMTEAGPVLSMCLAFAKEPFEIKSGACGTVVRNAEMKIVDPDTGI-SL--PRNQAGEICIRGAQIMKGTYHIYAPFL 408 (415)
Q Consensus 332 ~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~G~p~~~~~v~i~d~~~~~-~~--~~g~~Gel~v~~~~~~~gY~~~~~~~~ 408 (415)
+.||+||+++.++.+ ...+...+++|+|+|+++++|+|.+++. .+ .+++.|||+|+||+++.|||+||++|.
T Consensus 450 ~~YG~TEt~~~~~~~-----~~~~~~~gsvG~p~p~~evkivd~~~~~~~~~~~~~p~GEi~vrGp~v~~GY~~~pe~T~ 524 (696)
T PLN02387 450 QGYGLTETCAGATFS-----EWDDTSVGRVGPPLPCCYVKLVSWEEGGYLISDKPMPRGEIVIGGPSVTLGYFKNQEKTD 524 (696)
T ss_pred Eeechhhcccceeec-----CcccCCCCccCCCCCceEEEEeeccccCcccCCCCCCCceEEeccCcccchhcCCHHHHh
Confidence 999999998765544 2233456899999999999999954343 22 345679999999999999999999999
Q ss_pred eeee
Q 014952 409 LSIV 412 (415)
Q Consensus 409 ~~~~ 412 (415)
++|.
T Consensus 525 ~~f~ 528 (696)
T PLN02387 525 EVYK 528 (696)
T ss_pred hhhc
Confidence 8873
No 19
>TIGR02316 propion_prpE propionate--CoA ligase. This family contains one of three readily separable clades of proteins in the group of acetate and propionate--CoA ligases. Characterized members of this family act on propionate. From propionyl-CoA, there is a cyclic degradation pathway: it is ligated by PrpC to the TCA cycle intermediate oxaloacetate, acted upon further by PrpD and an aconitase, then cleaved by PrpB to pyruvate and the TCA cycle intermediate succinate.
Probab=100.00 E-value=1.2e-51 Score=413.44 Aligned_cols=390 Identities=18% Similarity=0.249 Sum_probs=308.8
Q ss_pred CCCCCCCCCCCHH-hHHHhhhccCCCCcEEEeCC----CCCeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhH
Q 014952 16 LPDIYIPNHLPLH-TYCFENISQFADRPCIINGP----TGDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQF 90 (415)
Q Consensus 16 ~~~~~~~~~~tl~-~~l~~~a~~~p~~~a~~~~~----~~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~ 90 (415)
++.|.....+|+. +.+.++++++|+++|+++.. ..+.+||+||.++++++|++|+++|+++||+|+++++|++++
T Consensus 42 ~~~wf~~~~~n~~~~~l~~~~~~~p~~~Al~~~~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~Gd~V~i~~~n~~e~ 121 (628)
T TIGR02316 42 FARWFAGGRTNLCHNALDRHLDERGEQLALVTVSSETGQERTLTYRQLHREVNVFASALRALGVGRGDRVLIYMPMIAEA 121 (628)
T ss_pred cCccCCCCEeeHHHHHHHHHhCcCCCCeEEEEEcCCCCceEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHH
Confidence 3456656667775 45667788899999998731 247899999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCeEeecCCCCCHHHHHHHHHhcCceEEEEcccc---------hHHHHhhhhh---cCceEEEeCCCC--
Q 014952 91 VFAFLGASYIGATSTTANPFYTPPEIAKQAIASKAKIIITQAVY---------NDKVRDLSEH---HGARIVTIDPPP-- 156 (415)
Q Consensus 91 ~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~vl~~~~~---------~~~~~~~~~~---~~~~~i~~~~~~-- 156 (415)
+++++||+++|++++|+++.++.+++..++++++++++|+++.. ...+...... ....++.++...
T Consensus 122 v~~~lA~~~~Gav~vpl~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~ 201 (628)
T TIGR02316 122 VFAMLACARIGAIHSVVFGGFASHSLALRIDDATPKLIVSADAGMRGGKVIPYKPLLDAAIAEAQHPPPHVLLVDRGLAP 201 (628)
T ss_pred HHHHHHHHHhCCEEEecCCCCCHHHHHHHHHhcCceEEEECCccccCCcccccHHHHHHHHHhcCCCCCEEEEEeCCCCC
Confidence 99999999999999999999999999999999999999997642 1222222211 123455554321
Q ss_pred -----CCccchhhhhhhcccCCCCcccCCCCCeEEEecCCCCCCCCceeeechHHHHHHHh-hhhcCCCCCccCCCCcEE
Q 014952 157 -----ENCLHFSELITQADENEIPAVKINPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVA-QQVDGENPNLYLHKEDVI 230 (415)
Q Consensus 157 -----~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~-~~~~~~~~~~~~~~~~~~ 230 (415)
.....++++.........+.....++++++|+|||||||.||||+++|.++..... .... .+.+.++|++
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ilyTSGTTG~PKgV~~sh~~~~~~~~~~~~~----~~~~~~~d~~ 277 (628)
T TIGR02316 202 MRLIPGRDVDYAALRTQHEDAQVPVEWLESNEPSYILYTSGTTGKPKGVQRDVGGYAVALALSMWA----IFGIRAGQVM 277 (628)
T ss_pred cCcccCccccHHHHhhccccCCCCceecCCCCcEEEEECCCCCCCCceEEECCcHHHHHHHHHHHH----hcCCCCCcEE
Confidence 11234455422211112233345678999999999999999999999999864433 2332 3457889999
Q ss_pred EEccchHHHHhhHHHHHHHHHcCcEEEEcCC----CCHHHHHHHHHhcCceeeecchHHHHHHHcCCC--CCCCCcccce
Q 014952 231 LCVLPLFHIYSLNSVLLCALRVGAAILIMQK----FDIVKLMELVQKYKVTVAPFVPPIVLAVAKSGD--VDKYDMSSIR 304 (415)
Q Consensus 231 ~~~~pl~~~~g~~~~~l~~l~~G~~~v~~~~----~~~~~~~~~l~~~~~t~l~~~p~~l~~l~~~~~--~~~~~l~~lr 304 (415)
++..|++|..+....++.++..|+++++.+. +++..+++.++++++|+++++|.+++.|.+... ....++++||
T Consensus 278 ~~~~~~~~~~g~~~~~~~~L~~G~~~v~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~l~~lr 357 (628)
T TIGR02316 278 FSASDVGWVVGHSYIVYAPLLAGAATVLYEGLPTNPDPGVWWSIVERYGVRTMFSAPTAIRVLKKQDAAWLRKHDLSSLH 357 (628)
T ss_pred EEcCCCCeeehhhHHHHHHHhccceEEEeCCCCCCCCHHHHHHHHHHhCCeEEEeCHHHHHHHHhcCCcccccCCcccee
Confidence 9999999999877678899999999999763 578999999999999999999999998887643 2456789999
Q ss_pred eeeecCCCCCHHHHHHHHhhCCCCccccccccccCCccccccccccCCccccCCCcccccccCCeEEEEeCCCCCCCCCC
Q 014952 305 TVMSGAAPMGKELEDAVRAKLPHAKLGQGYGMTEAGPVLSMCLAFAKEPFEIKSGACGTVVRNAEMKIVDPDTGISLPRN 384 (415)
Q Consensus 305 ~v~~gG~~l~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~G~p~~~~~v~i~d~~~~~~~~~g 384 (415)
.+++||+++++++.+++.+.+ +..+++.||+||++..+..... .........+++|+|+|+++++|+|+++|++++.|
T Consensus 358 ~~~~gGe~l~~~~~~~~~~~~-~~~~~~~yG~TE~~~~~~~~~~-~~~~~~~~~gs~G~p~~g~~v~i~d~~~g~~~~~g 435 (628)
T TIGR02316 358 WLFLAGEPLDEPTAHWITDGL-GKPVIDNYWQTETGWPVLAIMP-GLDLKPVKLGSPGLPMYGYHLRVLDEATGRPCGPN 435 (628)
T ss_pred EEEEecCCCCHHHHHHHHHHh-CCCEEecccccccCceeecCCC-CCCcCCCCCCCcccCcCCceEEEEECCCCCCCCCC
Confidence 999999999999999999998 7889999999999854332211 00111245688999999999999997689999999
Q ss_pred CceeEEEecC---ccccccccCCcceeeee
Q 014952 385 QAGEICIRGA---QIMKGTYHIYAPFLLSI 411 (415)
Q Consensus 385 ~~Gel~v~~~---~~~~gY~~~~~~~~~~~ 411 (415)
+.|||+++|| .++.|||++++.+.++|
T Consensus 436 ~~Gel~v~gp~~~g~~~~~~~~~~~~~~~~ 465 (628)
T TIGR02316 436 EKGVLTVVPPLPPGCLSTVWGDDARFLKTY 465 (628)
T ss_pred CcEEEEEecCCCccccccccCChHHHHHhh
Confidence 9999999998 57899999999887765
No 20
>PLN02654 acetate-CoA ligase
Probab=100.00 E-value=2.6e-51 Score=412.28 Aligned_cols=388 Identities=20% Similarity=0.267 Sum_probs=304.9
Q ss_pred CCCCCCCCCCCHHhHH-Hhhhc-cCCCCcEEEeCC----CCCeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchh
Q 014952 16 LPDIYIPNHLPLHTYC-FENIS-QFADRPCIINGP----TGDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQ 89 (415)
Q Consensus 16 ~~~~~~~~~~tl~~~l-~~~a~-~~p~~~a~~~~~----~~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~ 89 (415)
.+.|.....+|+...+ .++++ .+|+++|+++.. ..+.+||+||.++++++|+.|+++|+++||+|+++++|+++
T Consensus 78 ~~~wf~g~~~N~~~~~l~~~~~~~~~~~~Al~~~~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GdrV~i~~pn~~e 157 (666)
T PLN02654 78 SIEWFKGGKTNICYNCLDRNVEAGNGDKIAIYWEGNEPGFDASLTYSELLDRVCQLANYLKDVGVKKGDAVVIYLPMLME 157 (666)
T ss_pred cccccCCCEeeHHHHHHHHhhccCCCCCEEEEEEcCCCCceEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHH
Confidence 3566666678885544 44554 489999998732 13689999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhCCeEeecCCCCCHHHHHHHHHhcCceEEEEcccchH---------HHHhhhhhc-----Cc-eEEEeCC
Q 014952 90 FVFAFLGASYIGATSTTANPFYTPPEIAKQAIASKAKIIITQAVYND---------KVRDLSEHH-----GA-RIVTIDP 154 (415)
Q Consensus 90 ~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~vl~~~~~~~---------~~~~~~~~~-----~~-~~i~~~~ 154 (415)
+++++|||+++|++++|+++.++.+++..++++++++++|+++.... .+....... .. .++..+.
T Consensus 158 ~v~a~lA~~~~Gav~vpv~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (666)
T PLN02654 158 LPIAMLACARIGAVHSVVFAGFSAESLAQRIVDCKPKVVITCNAVKRGPKTINLKDIVDAALDESAKNGVSVGICLTYEN 237 (666)
T ss_pred HHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEcCccccCCcccchHHHHHHHHHhccccCCCccEEEEecc
Confidence 99999999999999999999999999999999999999999876432 111111110 11 1222221
Q ss_pred CC-----------CCccchhhhhhhcccCCCCcccCCCCCeEEEecCCCCCCCCceeeechHHHHHHH-hhhhcCCCCCc
Q 014952 155 PP-----------ENCLHFSELITQADENEIPAVKINPDDVVALPYSSGTTGLPKGVMLTHKGLVTSV-AQQVDGENPNL 222 (415)
Q Consensus 155 ~~-----------~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~-~~~~~~~~~~~ 222 (415)
.. .....++++. .......+.....++++++|+|||||||.||||+++|.+++... ..... .+
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~d~~~ilyTSGTTG~PKgVv~sh~~~~~~~~~~~~~----~~ 312 (666)
T PLN02654 238 QLAMKREDTKWQEGRDVWWQDVV-PNYPTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVYTATTFKY----AF 312 (666)
T ss_pred cccccccccccccCCcccHHHHh-hcCCCCCCceecCCCCceEEEecCCCCCCCceEEecccHHHHHHHHHHHH----hc
Confidence 10 0011233432 21111222334577999999999999999999999999986433 33333 34
Q ss_pred cCCCCcEEEEccchHHHHhhHHHHHHHHHcCcEEEEcCC----CCHHHHHHHHHhcCceeeecchHHHHHHHcCCC--CC
Q 014952 223 YLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIMQK----FDIVKLMELVQKYKVTVAPFVPPIVLAVAKSGD--VD 296 (415)
Q Consensus 223 ~~~~~~~~~~~~pl~~~~g~~~~~l~~l~~G~~~v~~~~----~~~~~~~~~l~~~~~t~l~~~p~~l~~l~~~~~--~~ 296 (415)
+++++|++++..|++|+.+....++.++..|+++++.+. +++..+++.++++++|++.++|.+++.|.+... ..
T Consensus 313 ~~~~~d~~~~~~~~~~~~g~~~~~~~~L~~G~tvvl~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~ 392 (666)
T PLN02654 313 DYKPTDVYWCTADCGWITGHSYVTYGPMLNGATVLVFEGAPNYPDSGRCWDIVDKYKVTIFYTAPTLVRSLMRDGDEYVT 392 (666)
T ss_pred CCCCCcEEEEcCCchhhhhhHHHHHHHHHcCceEEEECCCCCCCCHHHHHHHHHHhCCeEEEeCHHHHHHHHhhCccccc
Confidence 678899999999999999987778899999999999863 578999999999999999999999999987653 24
Q ss_pred CCCcccceeeeecCCCCCHHHHHHHHhhCCC--CccccccccccCCccccccccccCCccccCCCcccccccCCeEEEEe
Q 014952 297 KYDMSSIRTVMSGAAPMGKELEDAVRAKLPH--AKLGQGYGMTEAGPVLSMCLAFAKEPFEIKSGACGTVVRNAEMKIVD 374 (415)
Q Consensus 297 ~~~l~~lr~v~~gG~~l~~~~~~~~~~~~~~--~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~G~p~~~~~v~i~d 374 (415)
..++++||.++++|+++++++.+++.+.++. +++.+.||+||+++....... ......++++|+|+||++++|+|
T Consensus 393 ~~~l~~Lr~i~~~Ge~l~~~~~~~~~~~~g~~~~~i~~~yg~TE~g~~~~~~~~---~~~~~~~gs~G~p~~g~~v~i~d 469 (666)
T PLN02654 393 RHSRKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLP---GAWPQKPGSATFPFFGVQPVIVD 469 (666)
T ss_pred cCChhheeEEEEecCCCCHHHHHHHHHHhCCCCCceeccccccccCCeeeccCC---CCCCCCCCccCCCCCCceEEEEC
Confidence 4678999999999999999999999999943 679999999999875443210 11234678999999999999999
Q ss_pred CCCCCCCCCCCceeEEEec--CccccccccCCcceeeeee
Q 014952 375 PDTGISLPRNQAGEICIRG--AQIMKGTYHIYAPFLLSIV 412 (415)
Q Consensus 375 ~~~~~~~~~g~~Gel~v~~--~~~~~gY~~~~~~~~~~~~ 412 (415)
++|++++.++.|||++++ |+++.|||+|++++..+|+
T Consensus 470 -~~g~~~~~~~~Gel~v~~~~p~~~~gy~~~~~~~~~~~~ 508 (666)
T PLN02654 470 -EKGKEIEGECSGYLCVKKSWPGAFRTLYGDHERYETTYF 508 (666)
T ss_pred -CCCCCCCCCCceEEEEcCCCchhhhhhcCChHHHHHhhh
Confidence 558999999999999999 7899999999999887764
No 21
>PLN02860 o-succinylbenzoate-CoA ligase
Probab=100.00 E-value=2.5e-51 Score=406.68 Aligned_cols=375 Identities=22% Similarity=0.299 Sum_probs=300.1
Q ss_pred CCCHHhHHHhhhccCCCCcEEEeCCCCCeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHHhCCe
Q 014952 24 HLPLHTYCFENISQFADRPCIINGPTGDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGAT 103 (415)
Q Consensus 24 ~~tl~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~ 103 (415)
..|+.+.|.+.++++|+++++++. ++.+||+||.++++++|+.|.++|+++||+|+++++|+.+++++++||+++|++
T Consensus 6 ~~~~~~~~~~~~~~~p~~~a~~~~--~~~~Ty~el~~~~~~la~~L~~~Gv~~gd~V~v~~~n~~~~~~~~la~~~~Gav 83 (563)
T PLN02860 6 QAHICQCLTRLATLRGNAVVTISG--NRRRTGHEFVDGVLSLAAGLLRLGLRNGDVVAIAALNSDLYLEWLLAVACAGGI 83 (563)
T ss_pred hhHHHHHHHHHHHhcCCceEEecC--CceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHHHHHHHHhhccEE
Confidence 589999999999999999999986 789999999999999999999999999999999999999999999999999999
Q ss_pred EeecCCCCCHHHHHHHHHhcCceEEEEcccchHHHHhhhh--hcCce-EEEeCCCCC-C------ccchhhhhhhcccCC
Q 014952 104 STTANPFYTPPEIAKQAIASKAKIIITQAVYNDKVRDLSE--HHGAR-IVTIDPPPE-N------CLHFSELITQADENE 173 (415)
Q Consensus 104 ~v~l~~~~~~~~~~~~l~~~~~~~vl~~~~~~~~~~~~~~--~~~~~-~i~~~~~~~-~------~~~~~~l~~~~~~~~ 173 (415)
++|+++.++.+++.++++++++++++++++.......... ....+ ++..+.... . ....+++........
T Consensus 84 ~vpl~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (563)
T PLN02860 84 VAPLNYRWSFEEAKSAMLLVRPVMLVTDETCSSWYEELQNDRLPSLMWQVFLESPSSSVFIFLNSFLTTEMLKQRALGTT 163 (563)
T ss_pred EEeCCcccCHHHHHHHHHhcCceEEEEecccchHHHHHhhccCCceeEEEEecCcccccccchhhccccchhccCccccc
Confidence 9999999999999999999999999998765433332211 11122 232232110 0 111111100000001
Q ss_pred CCcccCCCCCeEEEecCCCCCCCCceeeechHHHHHHHhhhhcCCCCCccCCCCcEEEEccchHHHHhhHHHHHHHHHcC
Q 014952 174 IPAVKINPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVG 253 (415)
Q Consensus 174 ~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~l~~l~~G 253 (415)
.......++++++|+|||||||.||+|.++|.++..+...... .+.+.++++++...|++|..++. .++.++..|
T Consensus 164 ~~~~~~~~~~~a~i~~TSGTTG~PKgV~~s~~~~~~~~~~~~~----~~~~~~~d~~l~~~pl~h~~g~~-~~~~~l~~G 238 (563)
T PLN02860 164 ELDYAWAPDDAVLICFTSGTTGRPKGVTISHSALIVQSLAKIA----IVGYGEDDVYLHTAPLCHIGGLS-SALAMLMVG 238 (563)
T ss_pred cccCCCCCCCeEEEEecCCCCCCCceEEeehHHHHHHHHHHHh----hcCCCCCCEEEEecCchhhccHH-HHHHHHHcC
Confidence 1112346789999999999999999999999999876665544 44678899999999999999987 578899999
Q ss_pred cEEEEcCCCCHHHHHHHHHhcCceeeecchHHHHHHHcCCCC--CCCCcccceeeeecCCCCCHHHHHHHHhhCCCCccc
Q 014952 254 AAILIMQKFDIVKLMELVQKYKVTVAPFVPPIVLAVAKSGDV--DKYDMSSIRTVMSGAAPMGKELEDAVRAKLPHAKLG 331 (415)
Q Consensus 254 ~~~v~~~~~~~~~~~~~l~~~~~t~l~~~p~~l~~l~~~~~~--~~~~l~~lr~v~~gG~~l~~~~~~~~~~~~~~~~~~ 331 (415)
+++++.+++++..+++.++++++|++.++|.++..|++.... ....++++|.+++||+++++++.+++++.|++.+++
T Consensus 239 ~~~v~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~~~~gG~~l~~~~~~~~~~~~~~~~~~ 318 (563)
T PLN02860 239 ACHVLLPKFDAKAALQAIKQHNVTSMITVPAMMADLISLTRKSMTWKVFPSVRKILNGGGSLSSRLLPDAKKLFPNAKLF 318 (563)
T ss_pred ceEEecCCCCHHHHHHHHHHhCCeeEEeChHHHHHHHHhhhhhhccccccceeEEEeCCCcCCHHHHHHHHHhcCCCcee
Confidence 999999999999999999999999999999999999875432 234578999999999999999999999999889999
Q ss_pred cccccccCCccccccccccCC-----------------c-cccCCCcccccccCCeEEEEeCCCCCCCCCCCceeEEEec
Q 014952 332 QGYGMTEAGPVLSMCLAFAKE-----------------P-FEIKSGACGTVVRNAEMKIVDPDTGISLPRNQAGEICIRG 393 (415)
Q Consensus 332 ~~YG~tE~~~~~~~~~~~~~~-----------------~-~~~~~~~~G~p~~~~~v~i~d~~~~~~~~~g~~Gel~v~~ 393 (415)
+.||+||+++.++........ . ......++|+|+|+++++|+|++ +|+.|||+++|
T Consensus 319 ~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~p~~~~~v~i~~~~------~g~~Gel~v~g 392 (563)
T PLN02860 319 SAYGMTEACSSLTFMTLHDPTLESPKQTLQTVNQTKSSSVHQPQGVCVGKPAPHVELKIGLDE------SSRVGRILTRG 392 (563)
T ss_pred cCCCccccCcccccccccccccccchhhhhhhcccccccccccCCcccCCccCCcEEEEecCC------CCceeEEEEec
Confidence 999999998654432110100 0 01112368999999999999944 58899999999
Q ss_pred CccccccccCCcceeeee
Q 014952 394 AQIMKGTYHIYAPFLLSI 411 (415)
Q Consensus 394 ~~~~~gY~~~~~~~~~~~ 411 (415)
+.++.|||++|+.+...|
T Consensus 393 ~~~~~GY~~~~~~t~~~~ 410 (563)
T PLN02860 393 PHVMLGYWGQNSETASVL 410 (563)
T ss_pred CcccccccCCccccchhc
Confidence 999999999999887665
No 22
>TIGR02188 Ac_CoA_lig_AcsA acetate--CoA ligase. This model describes acetate-CoA ligase (EC 6.2.1.1), also called acetyl-CoA synthetase and acetyl-activating enzyme. It catalyzes the reaction ATP + acetate + CoA = AMP + diphosphate + acetyl-CoA and belongs to the family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=100.00 E-value=6.2e-51 Score=408.74 Aligned_cols=388 Identities=20% Similarity=0.271 Sum_probs=307.8
Q ss_pred CCCCCCCCCCHHhH-HHhhhccCCCCcEEEeCCC----CCeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHH
Q 014952 17 PDIYIPNHLPLHTY-CFENISQFADRPCIINGPT----GDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFV 91 (415)
Q Consensus 17 ~~~~~~~~~tl~~~-l~~~a~~~p~~~a~~~~~~----~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~ 91 (415)
++|.....+|+... |.++++++|+++|+++... .+.+||+||.++++++|+.|+++|+++||+|+++++|+++++
T Consensus 48 ~~wf~~~~~n~~~~~l~~~~~~~p~~~Al~~~~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~ 127 (625)
T TIGR02188 48 YKWFVGGELNVSYNCVDRHLEARPDKVAIIWEGDEPGEVRKITYRELHREVCRFANVLKSLGVKKGDRVAIYMPMIPEAA 127 (625)
T ss_pred CeeCCCCEEEHHHHHHHHhhccCCCCeEEEEEcCCCCceEEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHH
Confidence 34554455666554 4466788999999986432 368999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCeEeecCCCCCHHHHHHHHHhcCceEEEEcccch---------HHHHhhhhhc--Cc-eEEEeCCCCC--
Q 014952 92 FAFLGASYIGATSTTANPFYTPPEIAKQAIASKAKIIITQAVYN---------DKVRDLSEHH--GA-RIVTIDPPPE-- 157 (415)
Q Consensus 92 ~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~vl~~~~~~---------~~~~~~~~~~--~~-~~i~~~~~~~-- 157 (415)
++++||+++|++++|+++.++.+++.+++++++++++|+++... ..+....... .+ .++.++....
T Consensus 128 ~~~lA~~~~Gav~v~i~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (625)
T TIGR02188 128 IAMLACARIGAIHSVVFGGFSAEALADRINDAGAKLVITADEGLRGGKVIPLKAIVDEALEKCPVSVEHVLVVRRTGNPV 207 (625)
T ss_pred HHHHHHHHhCCEEeccCCCCCHHHHHHHHHhcCCCEEEEcCccccCCcccchHHHHHHHHHhCCCCccEEEEEcCCCCCc
Confidence 99999999999999999999999999999999999999986532 2222222222 12 2444432111
Q ss_pred -----CccchhhhhhhcccCCCCcccCCCCCeEEEecCCCCCCCCceeeechHHHHHHHhhhhcCCCCCccCCCCcEEEE
Q 014952 158 -----NCLHFSELITQADENEIPAVKINPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILC 232 (415)
Q Consensus 158 -----~~~~~~~l~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (415)
....+++++. ......+.....++++++|+|||||||.||+|+++|.++.......... .+++.++|++++
T Consensus 208 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~a~il~TSGTTG~PKgV~~s~~~~~~~~~~~~~~---~~~~~~~d~~~~ 283 (625)
T TIGR02188 208 PWVEGRDVWWHDLMA-KASAYCEPEPMDSEDPLFILYTSGSTGKPKGVLHTTGGYLLYAAMTMKY---VFDIKDGDIFWC 283 (625)
T ss_pred CccccccccHHHHHh-hcCCCCCceecCCCCceEEEecCCCCCCCCeEEECccHhHHHHHHHHHh---ccCCCCCcEEEE
Confidence 1223455422 2222233445677899999999999999999999999987554433221 346788999999
Q ss_pred ccchHHHHhhHHHHHHHHHcCcEEEEcCC----CCHHHHHHHHHhcCceeeecchHHHHHHHcCCCC--CCCCcccceee
Q 014952 233 VLPLFHIYSLNSVLLCALRVGAAILIMQK----FDIVKLMELVQKYKVTVAPFVPPIVLAVAKSGDV--DKYDMSSIRTV 306 (415)
Q Consensus 233 ~~pl~~~~g~~~~~l~~l~~G~~~v~~~~----~~~~~~~~~l~~~~~t~l~~~p~~l~~l~~~~~~--~~~~l~~lr~v 306 (415)
..|++|..+....++.++..|+++++.+. +++..+++.++++++|++.++|.+++.|.+.... +..++++||.+
T Consensus 284 ~~~~~~~~g~~~~~~~~l~~G~t~vl~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~l~~lr~i 363 (625)
T TIGR02188 284 TADVGWITGHSYIVYGPLANGATTVMFEGTPTYPDPGRFWEIIEKHKVTIFYTAPTAIRALMRLGDEWVKKHDLSSLRLL 363 (625)
T ss_pred CCCchhhhccHHHHHHHHHcCCeEEEECCCCCCCChhHHHHHHHHhCCeEEEeCHHHHHHHHhcCCcccccCCccceeEE
Confidence 99999999876678899999999998753 4799999999999999999999999999876532 34568999999
Q ss_pred eecCCCCCHHHHHHHHhhCC--CCccccccccccCCccccccccccCCccccCCCcccccccCCeEEEEeCCCCCCCC-C
Q 014952 307 MSGAAPMGKELEDAVRAKLP--HAKLGQGYGMTEAGPVLSMCLAFAKEPFEIKSGACGTVVRNAEMKIVDPDTGISLP-R 383 (415)
Q Consensus 307 ~~gG~~l~~~~~~~~~~~~~--~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~G~p~~~~~v~i~d~~~~~~~~-~ 383 (415)
++||+++++++.+++.+.++ ++++++.||+||+++.+..... .....+++++|+|++|++++|+| ++|++++ .
T Consensus 364 ~~~G~~l~~~~~~~~~~~~~~~~~~i~~~yG~TE~~~~~~~~~~---~~~~~~~~~~G~p~~g~~~~i~d-~~g~~~~~~ 439 (625)
T TIGR02188 364 GSVGEPINPEAWMWYYKVVGKERCPIVDTWWQTETGGIMITPLP---GATPTKPGSATLPFFGIEPAVVD-EEGNPVEGP 439 (625)
T ss_pred EEecCCCCHHHHHHHHHHcCCCCCceEecccccccCCceeecCC---CCCCcCCCcccCCcCCceEEEEC-CCCCCCCCC
Confidence 99999999999999999984 3789999999999875443211 11234578899999999999999 6699999 9
Q ss_pred CCceeEEEec--CccccccccCCcceeeeee
Q 014952 384 NQAGEICIRG--AQIMKGTYHIYAPFLLSIV 412 (415)
Q Consensus 384 g~~Gel~v~~--~~~~~gY~~~~~~~~~~~~ 412 (415)
|+.|||+|+| |++++|||++|+.+..+|+
T Consensus 440 g~~GeL~v~~p~p~~~~gy~~~~~~~~~~~~ 470 (625)
T TIGR02188 440 GEGGYLVIKQPWPGMLRTIYGDHERFVDTYF 470 (625)
T ss_pred CCeEEEEEccCCCcccccccCChHHHHHHHh
Confidence 9999999999 6899999999998877664
No 23
>PRK13295 cyclohexanecarboxylate-CoA ligase; Reviewed
Probab=100.00 E-value=1.5e-50 Score=400.14 Aligned_cols=375 Identities=26% Similarity=0.387 Sum_probs=310.2
Q ss_pred CCCHHhHHHhhhccCCCCcEEEeCCC----CCeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHH
Q 014952 24 HLPLHTYCFENISQFADRPCIINGPT----GDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASY 99 (415)
Q Consensus 24 ~~tl~~~l~~~a~~~p~~~a~~~~~~----~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~ 99 (415)
+.|+.+.|.+.++.+|+++|+++... .+.+||+||.++++++|++|.+.|+++||+|+++++|+.++++++||+++
T Consensus 23 ~~~l~~~l~~~a~~~p~~~A~~~~~~~~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~Val~~~n~~e~~~~~la~~~ 102 (547)
T PRK13295 23 DRTINDDLDACVASCPDKTAVTAVRLGTGAPRRFTYRELAALVDRVAVGLARLGVGRGDVVSCQLPNWWEFTVLYLACSR 102 (547)
T ss_pred CCCHHHHHHHHHHHCCCceEEEecCCCccccceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCChHHHHHHHHHHh
Confidence 57899999999999999999998632 27999999999999999999999999999999999999999999999999
Q ss_pred hCCeEeecCCCCCHHHHHHHHHhcCceEEEEcccch-----HHHHhhhhh-cCc-eEEEeCCCCCCccchhhhhhhcc--
Q 014952 100 IGATSTTANPFYTPPEIAKQAIASKAKIIITQAVYN-----DKVRDLSEH-HGA-RIVTIDPPPENCLHFSELITQAD-- 170 (415)
Q Consensus 100 ~G~~~v~l~~~~~~~~~~~~l~~~~~~~vl~~~~~~-----~~~~~~~~~-~~~-~~i~~~~~~~~~~~~~~l~~~~~-- 170 (415)
+|++++|++|.++.+++..++..++++++++++... +.+...... ... .++.++.. ...++.++.....
T Consensus 103 ~G~~~vpl~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 180 (547)
T PRK13295 103 IGAVLNPLMPIFRERELSFMLKHAESKVLVVPKTFRGFDHAAMARRLRPELPALRHVVVVGGD--GADSFEALLITPAWE 180 (547)
T ss_pred cCcEEeccccccCHHHHHHHHHhcCceEEEEeccccCcchHHHHHHHhhhCCCcceEEEecCC--CccCHHHHhhCCccc
Confidence 999999999999999999999999999999987541 222222111 112 33344322 1223444321110
Q ss_pred --c---CCCCcccCCCCCeEEEecCCCCCCCCceeeechHHHHHHHhhhhcCCCCCccCCCCcEEEEccchHHHHhhHHH
Q 014952 171 --E---NEIPAVKINPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSV 245 (415)
Q Consensus 171 --~---~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~ 245 (415)
. .........++++++|+|||||||.||+|.++|+++......... .+.+.+++++++..|++|..++...
T Consensus 181 ~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~----~~~~~~~~~~l~~~p~~h~~g~~~~ 256 (547)
T PRK13295 181 QEPDAPAILARLRPGPDDVTQLIYTSGTTGEPKGVMHTANTLMANIVPYAE----RLGLGADDVILMASPMAHQTGFMYG 256 (547)
T ss_pred cccccccccccCCCCCcceeEEEeCCCCCCCCCEEEeccHHHHHHHHHHHH----HhCCCCCCeEEEecCchhhhhHHHH
Confidence 0 011122346689999999999999999999999999888777665 4457889999999999999998877
Q ss_pred HHHHHHcCcEEEEcCCCCHHHHHHHHHhcCceeeecchHHHHHHHcCCCCCCCCcccceeeeecCCCCCHHHHHHHHhhC
Q 014952 246 LLCALRVGAAILIMQKFDIVKLMELVQKYKVTVAPFVPPIVLAVAKSGDVDKYDMSSIRTVMSGAAPMGKELEDAVRAKL 325 (415)
Q Consensus 246 ~l~~l~~G~~~v~~~~~~~~~~~~~l~~~~~t~l~~~p~~l~~l~~~~~~~~~~l~~lr~v~~gG~~l~~~~~~~~~~~~ 325 (415)
++.++..|+++++.+.+++..+++.++++++|++.++|+++..|.+........++++|.+++||+++++++.+++++.+
T Consensus 257 ~~~~l~~G~~~~~~~~~~~~~~~~~l~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~~l~~~~~~G~~l~~~~~~~~~~~~ 336 (547)
T PRK13295 257 LMMPVMLGATAVLQDIWDPARAAELIRTEGVTFTMASTPFLTDLTRAVKESGRPVSSLRTFLCAGAPIPGALVERARAAL 336 (547)
T ss_pred HHHHHHcCCeEEeCCCCCHHHHHHHHHHcCCcEEEecHHHHHHHHhcccccCCCcccceEEEEecCCCCHHHHHHHHHHh
Confidence 88999999999999888999999999999999999999999999887766667789999999999999999999999999
Q ss_pred CCCccccccccccCCccccccccccCCccccCCCcccccccCCeEEEEeCCCCCCCCCCCceeEEEecCccccccccCCc
Q 014952 326 PHAKLGQGYGMTEAGPVLSMCLAFAKEPFEIKSGACGTVVRNAEMKIVDPDTGISLPRNQAGEICIRGAQIMKGTYHIYA 405 (415)
Q Consensus 326 ~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~G~p~~~~~v~i~d~~~~~~~~~g~~Gel~v~~~~~~~gY~~~~~ 405 (415)
+.++++.||+||++.+...+. .........++|+|+++++++|+|+ ++++++.|+.|||+|+|+.++.||+++|+
T Consensus 337 -~~~~~~~YG~TE~~~~~~~~~---~~~~~~~~~~~G~~~~~~~v~i~d~-~~~~~~~g~~Gel~v~g~~~~~gY~~~~~ 411 (547)
T PRK13295 337 -GAKIVSAWGMTENGAVTLTKL---DDPDERASTTDGCPLPGVEVRVVDA-DGAPLPAGQIGRLQVRGCSNFGGYLKRPQ 411 (547)
T ss_pred -CCCeEEeccCCCCCCeeeccC---CCcchhccCccccccCCcEEEEECC-CCCCCCCCCCCeEEEEcCcccccccCCcc
Confidence 899999999999986543321 1112233567899999999999995 58999999999999999999999999998
Q ss_pred ceee
Q 014952 406 PFLL 409 (415)
Q Consensus 406 ~~~~ 409 (415)
.+..
T Consensus 412 ~t~~ 415 (547)
T PRK13295 412 LNGT 415 (547)
T ss_pred cccc
Confidence 7754
No 24
>KOG1256 consensus Long-chain acyl-CoA synthetases (AMP-forming) [Lipid transport and metabolism]
Probab=100.00 E-value=3e-51 Score=386.58 Aligned_cols=382 Identities=26% Similarity=0.375 Sum_probs=315.0
Q ss_pred CCCCCHHhHHHhhhccCCCCcEEEeCCC------CCeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHH
Q 014952 22 PNHLPLHTYCFENISQFADRPCIINGPT------GDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFL 95 (415)
Q Consensus 22 ~~~~tl~~~l~~~a~~~p~~~a~~~~~~------~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~l 95 (415)
.+..|+.+.+.+.+..+|+.+++..... -..+||.|+.+++.+++..|+++|+++++.|+|+.-|++||+++.+
T Consensus 72 ~~~~T~~~~f~~~~~~~~~~p~LG~r~~~~~~~~~~~~tY~q~~e~~~~~~~~l~~lG~~~~~~VGIy~~N~pEWiis~~ 151 (691)
T KOG1256|consen 72 DGPLTLYEGFRRSVEKSGNGPMLGTRVIVDGKGPYEWLTYKQVYERAENLGSGLRKLGVKEDSKVGIYAFNRPEWIISEM 151 (691)
T ss_pred CCcccHHHHhhcchhccCCCCceeEEecccCCCCcEEEEHHHHHHHHHHHHHHHHHhCCCCCceEEEeccCChhhHHhHH
Confidence 4579999999999999999999975531 2688999999999999999999999999999999999999999999
Q ss_pred HHHHhCCeEeecCCCCCHHHHHHHHHhcCceEEEEc-ccchHHHHhhhhh---cCce-EEEeCCC-------CCC----c
Q 014952 96 GASYIGATSTTANPFYTPPEIAKQAIASKAKIIITQ-AVYNDKVRDLSEH---HGAR-IVTIDPP-------PEN----C 159 (415)
Q Consensus 96 A~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~vl~~-~~~~~~~~~~~~~---~~~~-~i~~~~~-------~~~----~ 159 (415)
||...|.++||+-.+++++.+.++++.+...+++++ .+....+...... ..++ +|.++.. ..+ .
T Consensus 152 a~~~~~~v~VplYdTlg~ea~~~Ii~~~e~~iv~vd~~~k~~~ll~~~~~~~~~~LK~iI~~~~~~~~~~~~~~~~gv~v 231 (691)
T KOG1256|consen 152 ACYAYSLVNVPLYDTLGAEAVHYIINHAEISIVFVDNAKKAEKLLEIKENDSLPSLKAIIQLDEPSDELKEKAENNGVEV 231 (691)
T ss_pred HHHhcCCEEeecccCCCHHHHHHHHHhcceeEEEEeCHHHHHHHHhhcccccCccceeEEEecCCchhhhhhhhcCCeEE
Confidence 999999999999999999999999999999999999 5556666555442 2344 4555432 122 6
Q ss_pred cchhhhhhhcccCCCCc-ccCCCCCeEEEecCCCCCCCCceeeechHHHHHHHhhhhcCCCCCc--cCCCCcEEEEccch
Q 014952 160 LHFSELITQADENEIPA-VKINPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNL--YLHKEDVILCVLPL 236 (415)
Q Consensus 160 ~~~~~l~~~~~~~~~~~-~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~--~~~~~~~~~~~~pl 236 (415)
.+|+++........... .+..+++.+.|+|||||||.||||++||.|+++.+........... .....|+.++++|+
T Consensus 232 ~S~~e~~~lG~~~~~~~~~~p~p~d~atI~yTSGTTG~PKGVMLTH~Niv~~v~~~~~~~~~~~~~~~~~~dv~lSyLPL 311 (691)
T KOG1256|consen 232 YSWDEFEELGKKNQRKPRVPPKPDDLATICYTSGTTGNPKGVMLTHRNIVSDVAGIFFLSAAENAKATVGDDVYLSYLPL 311 (691)
T ss_pred EEHHHHHhhcccccCCCCCCCCccceEEEEEcCCCCCCCceEEEeccceeehhhhhhhhhhcccccccccCceEEEeCcH
Confidence 88999866665555444 5888999999999999999999999999999986553222111011 22346999999999
Q ss_pred HHHHhhHHHHHHHHHcCcEEEEcCCCCHHHHHHHHHhcCceeeecchHHHHHHHcC------------------------
Q 014952 237 FHIYSLNSVLLCALRVGAAILIMQKFDIVKLMELVQKYKVTVAPFVPPIVLAVAKS------------------------ 292 (415)
Q Consensus 237 ~~~~g~~~~~l~~l~~G~~~v~~~~~~~~~~~~~l~~~~~t~l~~~p~~l~~l~~~------------------------ 292 (415)
+|++..+. -+..+..|+.+.+.+. |+..+.+.|++.+||.+.++|.+|.++-+.
T Consensus 312 AHi~er~~-~~~~~~~G~~IgF~~g-D~~~l~~dlk~lkPT~f~~VPRVl~riye~I~~~~~~sgflkr~l~~~A~~~k~ 389 (691)
T KOG1256|consen 312 AHIFERVV-ELYTFYIGAKIGFARG-DILKLTDDLKELKPTVFPGVPRVLERIYEGIQKQVQKSGFLKRKLFNFAMAYKL 389 (691)
T ss_pred HHHHHHHH-HHhHhhcccEEEEecC-ChHHHHHHHHHhCCcEEeccHhHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHH
Confidence 99999985 5666789999999884 899999999999999999999998766530
Q ss_pred ------CCCC-CCC--------------cccceeeeecCCCCCHHHHHHHHhhCCCCccccccccccCCccccccccccC
Q 014952 293 ------GDVD-KYD--------------MSSIRTVMSGAAPMGKELEDAVRAKLPHAKLGQGYGMTEAGPVLSMCLAFAK 351 (415)
Q Consensus 293 ------~~~~-~~~--------------l~~lr~v~~gG~~l~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~ 351 (415)
.... ... -.++|.+++|++|+++++...++..+ ++++.++||+||+.+..++.
T Consensus 390 ~~~~~~G~~~~~~~~~D~lVf~KI~~~LGg~vr~~~sGaAPls~ev~~F~r~~~-g~~v~eGYGlTEts~g~~~~----- 463 (691)
T KOG1256|consen 390 EHRLMKGKSRSRDRFADKLVFHKIKQSLGGNVRLIISGAAPLSPEVLTFFRAAL-GCRVLEGYGLTETSAGTTLT----- 463 (691)
T ss_pred HHHhhCCCCcccchHHHHHHHHHHHHHhcCceeEEEecCCCCCHHHHHHHHHhc-CceeeecccccccCCceEec-----
Confidence 0000 000 25899999999999999999999998 89999999999998544443
Q ss_pred CccccCCCcccccccCCeEEEEeCCCCCCCCCCCceeEEEecCccccccccCCcceeeee
Q 014952 352 EPFEIKSGACGTVVRNAEMKIVDPDTGISLPRNQAGEICIRGAQIMKGTYHIYAPFLLSI 411 (415)
Q Consensus 352 ~~~~~~~~~~G~p~~~~~v~i~d~~~~~~~~~g~~Gel~v~~~~~~~gY~~~~~~~~~~~ 411 (415)
.+.+...+++|.|+|++++|++|+++.+.-+.|..|||||+|++||.|||+||+.|..+|
T Consensus 464 ~~~d~~lgsvG~p~p~~~vKL~dvpe~ny~a~~~~GEIcirG~~Vf~GYyK~p~~T~e~i 523 (691)
T KOG1256|consen 464 LPGDNVLGSVGPPVPGNEVKLVDVPEMNYDADGSKGEICVRGPNVFMGYYKDPEKTAEAI 523 (691)
T ss_pred cCCCCCCCCcCCcccCceEEEechHHhCcCcCCCcceEEEecchhceeccCChHHHhhhh
Confidence 334458899999999999999998777777888899999999999999999999999876
No 25
>PRK05677 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=2.2e-50 Score=399.96 Aligned_cols=378 Identities=25% Similarity=0.411 Sum_probs=306.1
Q ss_pred CCCHHhHHHhhhccCCCCcEEEeCCCCCeeeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEcCCchhHHHHHHHHHHhCC
Q 014952 24 HLPLHTYCFENISQFADRPCIINGPTGDVYTYADVELTSRKVAAGLSK-LGVQKGDVIMLLLQNCPQFVFAFLGASYIGA 102 (415)
Q Consensus 24 ~~tl~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~~a~~L~~-~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~ 102 (415)
..|+.+.|.+.++++|+++|+++. ++.+||+||.++++++|+.|.+ .|+++||+|+++++|+.++++++|||+++|+
T Consensus 23 ~~~~~~~l~~~a~~~p~~~al~~~--~~~~Ty~el~~~~~~la~~L~~~~gi~~gd~Vai~~~n~~~~~~~~la~~~~Ga 100 (562)
T PRK05677 23 YPNIQAVLKQSCQRFADKPAFSNL--GKTLTYGELYKLSGAFAAWLQQHTDLKPGDRIAVQLPNVLQYPVAVFGAMRAGL 100 (562)
T ss_pred cCcHHHHHHHHHHhCCCCeeEEEC--CceeeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHHcCe
Confidence 369999999999999999999986 7899999999999999999997 5999999999999999999999999999999
Q ss_pred eEeecCCCCCHHHHHHHHHhcCceEEEEcccchHHHHhhhhhcCceEEEeCCCC--------------------------
Q 014952 103 TSTTANPFYTPPEIAKQAIASKAKIIITQAVYNDKVRDLSEHHGARIVTIDPPP-------------------------- 156 (415)
Q Consensus 103 ~~v~l~~~~~~~~~~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~i~~~~~~-------------------------- 156 (415)
+++|++|.++.+++..+++++++++++++.+..+.+.+.......+.+.+....
T Consensus 101 ~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (562)
T PRK05677 101 IVVNTNPLYTAREMEHQFNDSGAKALVCLANMAHLAEKVLPKTGVKHVIVTEVADMLPPLKRLLINAVVKHVKKMVPAYH 180 (562)
T ss_pred EEeecCCCCCHHHHHHHHhccCceEEEEecchhhhHHHhhhccCcceeEEecccccccchhhhhcccchhhccccccccC
Confidence 999999999999999999999999999987766655444332233322221100
Q ss_pred -CCccchhhhhhhcccCCCCcccCCCCCeEEEecCCCCCCCCceeeechHHHHHHHhhhhcCCCCCccCC-CCcEEEEcc
Q 014952 157 -ENCLHFSELITQADENEIPAVKINPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLH-KEDVILCVL 234 (415)
Q Consensus 157 -~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 234 (415)
.....+.+.+..............++++++|+|||||||.||+|.++|+++..........+. ..+. ..+.+++.+
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~~--~~~~~~~~~~~~~~ 258 (562)
T PRK05677 181 LPQAVKFNDALAKGAGQPVTEANPQADDVAVLQYTGGTTGVAKGAMLTHRNLVANMLQCRALMG--SNLNEGCEILIAPL 258 (562)
T ss_pred CcccccHHHHHhcCCCCCCCCCCCCccCEEEEEeCCCCCCCCcEEEEehhHHHHHHHHHHHHhc--cCCCCCccEEEEcC
Confidence 011222222111111122223456789999999999999999999999999876655443221 1122 346889999
Q ss_pred chHHHHhhHHHHHHHHHcCcEEEEcC-CCCHHHHHHHHHhcCceeeecchHHHHHHHcCCCCCCCCcccceeeeecCCCC
Q 014952 235 PLFHIYSLNSVLLCALRVGAAILIMQ-KFDIVKLMELVQKYKVTVAPFVPPIVLAVAKSGDVDKYDMSSIRTVMSGAAPM 313 (415)
Q Consensus 235 pl~~~~g~~~~~l~~l~~G~~~v~~~-~~~~~~~~~~l~~~~~t~l~~~p~~l~~l~~~~~~~~~~l~~lr~v~~gG~~l 313 (415)
|++|.+++...++..+..|++.++.+ ..++..+++.++++++|++.++|.++..+.+........++++|.+++||+++
T Consensus 259 pl~h~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~lr~v~~gG~~~ 338 (562)
T PRK05677 259 PLYHIYAFTFHCMAMMLIGNHNILISNPRDLPAMVKELGKWKFSGFVGLNTLFVALCNNEAFRKLDFSALKLTLSGGMAL 338 (562)
T ss_pred cHHHHHHHHHHHHHHHHcCCeEEEecCcccHHHHHHHHHHcCceEEecHHHHHHHHHhCcccccCChhhceEEEEcCccC
Confidence 99999998766777888888877665 57899999999999999999999999999876655555678999999999999
Q ss_pred CHHHHHHHHhhCCCCccccccccccCCccccccccccCCccccCCCcccccccCCeEEEEeCCCCCCCCCCCceeEEEec
Q 014952 314 GKELEDAVRAKLPHAKLGQGYGMTEAGPVLSMCLAFAKEPFEIKSGACGTVVRNAEMKIVDPDTGISLPRNQAGEICIRG 393 (415)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~G~p~~~~~v~i~d~~~~~~~~~g~~Gel~v~~ 393 (415)
++++.+++.+.+ ++++++.||+||+++++... ......++++|+|+|+++++|+|+ ++++++.|+.|||+++|
T Consensus 339 ~~~~~~~~~~~~-~~~v~~~YG~tE~~~~~~~~-----~~~~~~~~~vG~~~~~~~v~i~d~-~~~~~~~g~~Gel~v~g 411 (562)
T PRK05677 339 QLATAERWKEVT-GCAICEGYGMTETSPVVSVN-----PSQAIQVGTIGIPVPSTLCKVIDD-DGNELPLGEVGELCVKG 411 (562)
T ss_pred CHHHHHHHHHHc-CCCeeccCCccccCcceeec-----CccCCCCCccCccCCCCEEEEECC-CCCCCCCCCCeEEEEec
Confidence 999999999988 89999999999998765443 122335678999999999999995 58999999999999999
Q ss_pred CccccccccCCcceeeeee
Q 014952 394 AQIMKGTYHIYAPFLLSIV 412 (415)
Q Consensus 394 ~~~~~gY~~~~~~~~~~~~ 412 (415)
|.++.||+++|+.+...|.
T Consensus 412 ~~~~~gY~~~~~~t~~~~~ 430 (562)
T PRK05677 412 PQVMKGYWQRPEATDEILD 430 (562)
T ss_pred CccchhhcCCchhhhhccC
Confidence 9999999999999887764
No 26
>PTZ00216 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=4.6e-51 Score=412.68 Aligned_cols=379 Identities=21% Similarity=0.259 Sum_probs=297.0
Q ss_pred CCCCHHhHHHhhhccCCCCcEEEeCC-------------------------CCCeeeHHHHHHHHHHHHHHHHHcCCCCC
Q 014952 23 NHLPLHTYCFENISQFADRPCIINGP-------------------------TGDVYTYADVELTSRKVAAGLSKLGVQKG 77 (415)
Q Consensus 23 ~~~tl~~~l~~~a~~~p~~~a~~~~~-------------------------~~~~~Ty~el~~~~~~~a~~L~~~g~~~g 77 (415)
+..|+.++|.++++++|+++|+.... ..+.+||+||.++++++|++|+++|+++|
T Consensus 67 ~~~t~~~~~~~~~~~~p~~~a~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lTy~el~~~~~~lA~~L~~~Gv~~g 146 (700)
T PTZ00216 67 YGPNFLQRLERICKERGDRRALAYRPVERVEKEVVKDADGKERTMEVTHFNETRYITYAELWERIVNFGRGLAELGLTKG 146 (700)
T ss_pred CCCCHHHHHHHHHHhCCCCCeEEEeccccccccccccCCCccccccccccCCceEeEHHHHHHHHHHHHHHHHHhCCCCC
Confidence 45799999999999999999998741 24789999999999999999999999999
Q ss_pred CEEEEEcCCchhHHHHHHHHHHhCCeEeecCCCCCHHHHHHHHHhcCceEEEEcccchHHHHhhhhh---cCceEEEeCC
Q 014952 78 DVIMLLLQNCPQFVFAFLGASYIGATSTTANPFYTPPEIAKQAIASKAKIIITQAVYNDKVRDLSEH---HGARIVTIDP 154 (415)
Q Consensus 78 ~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~vl~~~~~~~~~~~~~~~---~~~~~i~~~~ 154 (415)
|+|+|+++|+++++++.+||+++|++++|+++.++.+++.++++++++++++++......+...... ...+++.++.
T Consensus 147 d~V~i~~~n~~e~~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~~~lv~~~~~~~~l~~~~~~~~~~~~~ii~~~~ 226 (700)
T PTZ00216 147 SNVAIYEETRWEWLASIYGIWSQSMVAATVYANLGEDALAYALRETECKAIVCNGKNVPNLLRLMKSGGMPNTTIIYLDS 226 (700)
T ss_pred CEEEEEcCCCHHHHHHHHHHHHcCCeEEeeCCCCCHHHHHhhhhccCccEEEECHHHHHHHHHhhhhccCCceEEEEECC
Confidence 9999999999999999999999999999999999999999999999999999987765554433221 2245666654
Q ss_pred CCC-------Cccchhhhhhhcc--cCCC-CcccCCCCCeEEEecCCCCCCCCceeeechHHHHHHHhhhhcCCCCCcc-
Q 014952 155 PPE-------NCLHFSELITQAD--ENEI-PAVKINPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLY- 223 (415)
Q Consensus 155 ~~~-------~~~~~~~l~~~~~--~~~~-~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~- 223 (415)
... ...+++++..... .... ......++++++|+|||||||.||||++||+++.+.+..........+.
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~iiyTSGTTG~PKGV~lth~nl~~~~~~~~~~~~~~~~~ 306 (700)
T PTZ00216 227 LPASVDTEGCRLVAWTDVVAKGHSAGSHHPLNIPENNDDLALIMYTSGTTGDPKGVMHTHGSLTAGILALEDRLNDLIGP 306 (700)
T ss_pred CccccccCCceEEEHHHHHHhCCccccccccCCCCCcccEEEEEEeCCCCCcCcEEEEEhHHHHHHHHHHHhhcccccCC
Confidence 221 2345666633321 1111 1234467899999999999999999999999999887766543211122
Q ss_pred CCCCcEEEEccchHHHHhhHHHHHHHHHcCcEEEEcCCCCHHHHHH-------HHHhcCceeeecchHHHHHHHcCCC--
Q 014952 224 LHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIMQKFDIVKLME-------LVQKYKVTVAPFVPPIVLAVAKSGD-- 294 (415)
Q Consensus 224 ~~~~~~~~~~~pl~~~~g~~~~~l~~l~~G~~~v~~~~~~~~~~~~-------~l~~~~~t~l~~~p~~l~~l~~~~~-- 294 (415)
..+++++++++|++|.++... ....+..|+++++. ++..+.+ .++++++|++.++|.++..+.+...
T Consensus 307 ~~~~d~~ls~lPl~H~~~~~~-~~~~l~~G~~v~~~---~~~~l~~~~~~~~~~l~~~~pT~~~~vP~~~~~l~~~~~~~ 382 (700)
T PTZ00216 307 PEEDETYCSYLPLAHIMEFGV-TNIFLARGALIGFG---SPRTLTDTFARPHGDLTEFRPVFLIGVPRIFDTIKKAVEAK 382 (700)
T ss_pred CCCCCEEEEEChHHHHHHHHH-HHHHHHcCCEEEEC---CHHHhhhhhccccchHHHcCCcEEEechHHHHHHHHHHHHH
Confidence 367899999999999999863 55567788877764 3455444 6889999999999999987754210
Q ss_pred -------------------------CCC--------------CCcccceeeeecCCCCCHHHHHHHHhhCCCCccccccc
Q 014952 295 -------------------------VDK--------------YDMSSIRTVMSGAAPMGKELEDAVRAKLPHAKLGQGYG 335 (415)
Q Consensus 295 -------------------------~~~--------------~~l~~lr~v~~gG~~l~~~~~~~~~~~~~~~~~~~~YG 335 (415)
... ...+++|.+++||+++++++.++++..+ + ++++.||
T Consensus 383 ~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~~~~g~~lr~i~~GGa~l~~~~~~~~~~~~-~-~l~~~YG 460 (700)
T PTZ00216 383 LPPVGSLKRRVFDHAYQSRLRALKEGKDTPYWNEKVFSAPRAVLGGRVRAMLSGGGPLSAATQEFVNVVF-G-MVIQGWG 460 (700)
T ss_pred HhccCHHHHHHHHHHHHHHHHHHHcCCCCchHHHHHHHHHHHHhCCcEEEEEECCCCCCHHHHHHHHHHh-h-hHhhccC
Confidence 000 0015899999999999999999888877 6 9999999
Q ss_pred cccCCccccccccccCCccccCCCcccccccCCeEEEEeCCCC-CCCCCCCceeEEEecCccccccccCCcceeeeee
Q 014952 336 MTEAGPVLSMCLAFAKEPFEIKSGACGTVVRNAEMKIVDPDTG-ISLPRNQAGEICIRGAQIMKGTYHIYAPFLLSIV 412 (415)
Q Consensus 336 ~tE~~~~~~~~~~~~~~~~~~~~~~~G~p~~~~~v~i~d~~~~-~~~~~g~~Gel~v~~~~~~~gY~~~~~~~~~~~~ 412 (415)
+||+++..+.. .......+++|+|+|+++++|+|+++. ...++++.|||+|+||+++.|||++|+.|..+|.
T Consensus 461 ~TEt~~~~~~~-----~~~~~~~~svG~p~~g~evkI~d~~~~~~~~~~~~~GEL~vrG~~v~~GY~~~pe~T~~~f~ 533 (700)
T PTZ00216 461 LTETVCCGGIQ-----RTGDLEPNAVGQLLKGVEMKLLDTEEYKHTDTPEPRGEILLRGPFLFKGYYKQEELTREVLD 533 (700)
T ss_pred ccccccccccc-----CCCCCCCCCcCCcCCCeEEEEeechhhccCCCCCCCceEEEcCCcccchhcCChhHhhhhcc
Confidence 99998654433 223446789999999999999996532 2345677899999999999999999999998874
No 27
>PRK05605 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=2.8e-50 Score=400.52 Aligned_cols=394 Identities=27% Similarity=0.434 Sum_probs=319.7
Q ss_pred cceeecCCCCCCCCC----CCCHHhHHHhhhccCCCCcEEEeCCCCCeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEc
Q 014952 9 EFIFRSKLPDIYIPN----HLPLHTYCFENISQFADRPCIINGPTGDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLL 84 (415)
Q Consensus 9 ~~~~~~~~~~~~~~~----~~tl~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~ 84 (415)
.+.|-+.+-+|...+ ..|+.+.+.++++++|+++|+++. ++.+||.||.++++++|+.|.++|+++||+|++++
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~a~~~~--~~~~Ty~ql~~~~~~~A~~L~~~gi~~gd~V~l~~ 89 (573)
T PRK05605 12 DKPWLQSYAPWTPHDLDYGDTTLVDLYDNAVARFGDRPALDFF--GATTTYAELGKQVRRAAAGLRALGVRPGDRVAIVL 89 (573)
T ss_pred cCCchhhcCCCCCcccCCCcCCHHHHHHHHHHHCCCCeEEEeC--CCcccHHHHHHHHHHHHHHHHHhCCCCCCEEEEEC
Confidence 344544444443322 369999999999999999999986 78999999999999999999999999999999999
Q ss_pred CCchhHHHHHHHHHHhCCeEeecCCCCCHHHHHHHHHhcCceEEEEcccchHHHHhhhhhcCce-EEEeCCC--------
Q 014952 85 QNCPQFVFAFLGASYIGATSTTANPFYTPPEIAKQAIASKAKIIITQAVYNDKVRDLSEHHGAR-IVTIDPP-------- 155 (415)
Q Consensus 85 ~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~-~i~~~~~-------- 155 (415)
+|+.+++++++||+++|++++|++|.++.+++.+++.+++++++|+++.....+.......... ++.++..
T Consensus 90 ~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 169 (573)
T PRK05605 90 PNCPQHIVAFYAVLRLGAVVVEHNPLYTAHELEHPFEDHGARVAIVWDKVAPTVERLRRTTPLETIVSVNMIAAMPLLQR 169 (573)
T ss_pred CCCHHHHHHHHHHHhcCcEEeecCcCCCHHHHHHHHhccCCcEEEechhhHHHHHhhhhccccceeEeeecccccccccc
Confidence 9999999999999999999999999999999999999999999999887666554443322222 2222210
Q ss_pred --------------------CCCccchhhhhhhcccC---CCCcccCCCCCeEEEecCCCCCCCCceeeechHHHHHHHh
Q 014952 156 --------------------PENCLHFSELITQADEN---EIPAVKINPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVA 212 (415)
Q Consensus 156 --------------------~~~~~~~~~l~~~~~~~---~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~ 212 (415)
......++++....... .........+++++|+|||||||.||+|.++|+++..+..
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~ 249 (573)
T PRK05605 170 LALRLPIPALRKARAALTGPAPGTVPWETLVDAAIGGDGSDVSHPRPTPDDVALILYTSGTTGKPKGAQLTHRNLFANAA 249 (573)
T ss_pred cccccccccccccccccccCCCcceeHHHHhhccccccccccCCCCCCCCCEEEEEcCCCCCCCCcEEEEecHHHHHHHH
Confidence 11223444442211111 0122335678999999999999999999999999987766
Q ss_pred hhhcCCCCCccCCCCcEEEEccchHHHHhhHHHHHHHHHcCcEEEEcCCCCHHHHHHHHHhcCceeeecchHHHHHHHcC
Q 014952 213 QQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIMQKFDIVKLMELVQKYKVTVAPFVPPIVLAVAKS 292 (415)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~l~~l~~G~~~v~~~~~~~~~~~~~l~~~~~t~l~~~p~~l~~l~~~ 292 (415)
....... . .....+++++..|++|.+|+...++.++..|+++++.+.+++..+++.++++++|++.++|.+++.|++.
T Consensus 250 ~~~~~~~-~-~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~ 327 (573)
T PRK05605 250 QGKAWVP-G-LGDGPERVLAALPMFHAYGLTLCLTLAVSIGGELVLLPAPDIDLILDAMKKHPPTWLPGVPPLYEKIAEA 327 (573)
T ss_pred HHHhhcc-c-cCCCCcEEEEecChHHHHHHHHHHHHHHHcCCEEEEeCCCCHHHHHHHHHHhCCEEEEchHHHHHHHHhC
Confidence 5443221 0 1234789999999999999876777889999999999888999999999999999999999999999988
Q ss_pred CCCCCCCcccceeeeecCCCCCHHHHHHHHhhCCCCccccccccccCCccccccccccCCccccCCCcccccccCCeEEE
Q 014952 293 GDVDKYDMSSIRTVMSGAAPMGKELEDAVRAKLPHAKLGQGYGMTEAGPVLSMCLAFAKEPFEIKSGACGTVVRNAEMKI 372 (415)
Q Consensus 293 ~~~~~~~l~~lr~v~~gG~~l~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~G~p~~~~~v~i 372 (415)
...+..+++++|.+++||++++.++.+++.+.+ +..+++.||+||+++++..+. .......+++|+|+|++.++|
T Consensus 328 ~~~~~~~~~~lr~i~~gg~~l~~~~~~~~~~~~-~~~i~~~YG~TE~~~~~~~~~----~~~~~~~~~~G~~~~~~~~~i 402 (573)
T PRK05605 328 AEERGVDLSGVRNAFSGAMALPVSTVELWEKLT-GGLLVEGYGLTETSPIIVGNP----MSDDRRPGYVGVPFPDTEVRI 402 (573)
T ss_pred ccccCCCchhccEEEECCCcCCHHHHHHHHHHh-CCCeecccccchhchhhhcCC----cccCCcCCccccCCCCCEEEE
Confidence 776677889999999999999999999999988 789999999999997655431 112335678999999999999
Q ss_pred EeCCC-CCCCCCCCceeEEEecCccccccccCCcceeeee
Q 014952 373 VDPDT-GISLPRNQAGEICIRGAQIMKGTYHIYAPFLLSI 411 (415)
Q Consensus 373 ~d~~~-~~~~~~g~~Gel~v~~~~~~~gY~~~~~~~~~~~ 411 (415)
+|+++ +.+++.|+.|||+++|+.++.||+++++.++..|
T Consensus 403 ~d~~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~ 442 (573)
T PRK05605 403 VDPEDPDETMPDGEEGELLVRGPQVFKGYWNRPEETAKSF 442 (573)
T ss_pred EcCCCCCccCCCCCeeEEEEecCchhhhhcCChhHhhhcc
Confidence 99776 6899999999999999999999999999988766
No 28
>PRK00174 acetyl-CoA synthetase; Provisional
Probab=100.00 E-value=2.7e-50 Score=404.73 Aligned_cols=389 Identities=22% Similarity=0.319 Sum_probs=306.4
Q ss_pred CCCCCCCCCCCHH-hHHHhhhccCCCCcEEEeCC----CCCeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhH
Q 014952 16 LPDIYIPNHLPLH-TYCFENISQFADRPCIINGP----TGDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQF 90 (415)
Q Consensus 16 ~~~~~~~~~~tl~-~~l~~~a~~~p~~~a~~~~~----~~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~ 90 (415)
++.|.....+|+. +.|.++++++|+++|+++.+ ..+.+||+||.++++++|+.|+++|+++||+|+++++|++++
T Consensus 57 ~~~w~~~~~~n~~~~~l~~~~~~~p~~~Al~~~~~~~~~~~~lTy~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~ 136 (637)
T PRK00174 57 FIKWFEDGELNVSYNCLDRHLKTRGDKVAIIWEGDDPGDSRKITYRELHREVCRFANALKSLGVKKGDRVAIYMPMIPEA 136 (637)
T ss_pred CCccCCCCEeEHHHHHHHHhhccCCCCeEEEEECCCCCceEEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHH
Confidence 3445444456664 45667788899999999643 235899999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCeEeecCCCCCHHHHHHHHHhcCceEEEEcccch---------HHHHhhhhh-cCc-eEEEeCCCC---
Q 014952 91 VFAFLGASYIGATSTTANPFYTPPEIAKQAIASKAKIIITQAVYN---------DKVRDLSEH-HGA-RIVTIDPPP--- 156 (415)
Q Consensus 91 ~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~vl~~~~~~---------~~~~~~~~~-~~~-~~i~~~~~~--- 156 (415)
++++|||+++|++++|+++.++.+++.+++++++++++|+++... +.+...... ... .++.++...
T Consensus 137 ~~~~lA~~~~Gav~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (637)
T PRK00174 137 AVAMLACARIGAVHSVVFGGFSAEALADRIIDAGAKLVITADEGVRGGKPIPLKANVDEALANCPSVEKVIVVRRTGGDV 216 (637)
T ss_pred HHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCCcEEEEcCccccCCcccchHHHHHHHHHhCCCccEEEEEcCCCCCc
Confidence 999999999999999999999999999999999999999976532 222222221 122 233333211
Q ss_pred ----CCccchhhhhhhcccCCCCcccCCCCCeEEEecCCCCCCCCceeeechHHHHHHHhhhhcCCCCCccCCCCcEEEE
Q 014952 157 ----ENCLHFSELITQADENEIPAVKINPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILC 232 (415)
Q Consensus 157 ----~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (415)
.....++++. .......+.....++++++|+|||||||.||+|+++|++++.+....... .+.+.+++++++
T Consensus 217 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~s~~~~~~~~~~~~~~---~~~~~~~d~~~~ 292 (637)
T PRK00174 217 DWVEGRDLWWHELV-AGASDECEPEPMDAEDPLFILYTSGSTGKPKGVLHTTGGYLVYAAMTMKY---VFDYKDGDVYWC 292 (637)
T ss_pred CcCCCCcccHHHHH-hhcCCCCCccccCCCCcEEEEECCCCCCCCceEEeCcchhHHHHHHHHHh---ccCCCCCcEEEE
Confidence 1122345542 22222233445667899999999999999999999999987554332221 345778899999
Q ss_pred ccchHHHHhhHHHHHHHHHcCcEEEEcCC----CCHHHHHHHHHhcCceeeecchHHHHHHHcCCCC--CCCCcccceee
Q 014952 233 VLPLFHIYSLNSVLLCALRVGAAILIMQK----FDIVKLMELVQKYKVTVAPFVPPIVLAVAKSGDV--DKYDMSSIRTV 306 (415)
Q Consensus 233 ~~pl~~~~g~~~~~l~~l~~G~~~v~~~~----~~~~~~~~~l~~~~~t~l~~~p~~l~~l~~~~~~--~~~~l~~lr~v 306 (415)
..|++|..+....++.++..|+++++.+. +++..+++.++++++|++.++|.+++.|++.... ...++++||.+
T Consensus 293 ~~~~~~~~~~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~i 372 (637)
T PRK00174 293 TADVGWVTGHSYIVYGPLANGATTLMFEGVPNYPDPGRFWEVIDKHKVTIFYTAPTAIRALMKEGDEHPKKYDLSSLRLL 372 (637)
T ss_pred cCCchHhhhhHHHHHHHHHcCCEEEEECCCCCCCChHHHHHHHHhcCCeEEeecHHHHHHHHhcCCcccccCCccceeEE
Confidence 99999999887678899999999998753 4789999999999999999999999999876532 34568999999
Q ss_pred eecCCCCCHHHHHHHHhhCCC--CccccccccccCCccccccccccCCccccCCCcccccccCCeEEEEeCCCCCCCCCC
Q 014952 307 MSGAAPMGKELEDAVRAKLPH--AKLGQGYGMTEAGPVLSMCLAFAKEPFEIKSGACGTVVRNAEMKIVDPDTGISLPRN 384 (415)
Q Consensus 307 ~~gG~~l~~~~~~~~~~~~~~--~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~G~p~~~~~v~i~d~~~~~~~~~g 384 (415)
++||+++++++.+++.+.++. +++++.||+||+++.+.... ........+++|+|++|++++|+| ++|++++.|
T Consensus 373 ~~~Ge~l~~~~~~~~~~~~~~~~~~i~~~YG~TE~~~~~~~~~---~~~~~~~~~~vG~p~~g~~~~i~d-~~g~~~~~g 448 (637)
T PRK00174 373 GSVGEPINPEAWEWYYKVVGGERCPIVDTWWQTETGGIMITPL---PGATPLKPGSATRPLPGIQPAVVD-EEGNPLEGG 448 (637)
T ss_pred EEeCCCCCHHHHHHHHHHhCCCCCceEecccccccCCceEecC---CCCCCcCCCcccCCCCCceEEEEC-CCCCCCCCC
Confidence 999999999999999998842 78999999999987544321 011223467899999999999999 559999999
Q ss_pred CceeEEEec--CccccccccCCcceeeeee
Q 014952 385 QAGEICIRG--AQIMKGTYHIYAPFLLSIV 412 (415)
Q Consensus 385 ~~Gel~v~~--~~~~~gY~~~~~~~~~~~~ 412 (415)
+.|||+|+| |++++|||++++.+...|+
T Consensus 449 ~~Gel~v~g~~p~~~~gy~~~~~~~~~~~~ 478 (637)
T PRK00174 449 EGGNLVIKDPWPGMMRTIYGDHERFVKTYF 478 (637)
T ss_pred CcEEEEEcCCCCcccccccCCHHHHHHhhh
Confidence 999999999 6999999999998876653
No 29
>PRK07656 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=3.8e-50 Score=394.85 Aligned_cols=377 Identities=29% Similarity=0.441 Sum_probs=319.2
Q ss_pred CCCHHhHHHhhhccCCCCcEEEeCCCCCeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHHhCCe
Q 014952 24 HLPLHTYCFENISQFADRPCIINGPTGDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGAT 103 (415)
Q Consensus 24 ~~tl~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~ 103 (415)
..++.+.|.+.++.+|+++|+++. ++++||+||.+.+.++|+.|.+.|+++||+|+++++|+.+++++++||+++|++
T Consensus 4 ~~~i~~~l~~~~~~~~~~~a~~~~--~~~~Ty~~l~~~~~~~a~~L~~~gv~~g~~V~l~~~~~~~~~~~~la~~~~G~~ 81 (513)
T PRK07656 4 WMTLPELLARAARRFGDKEAYVFG--DQRLTYAELNARVRRAAAALAALGIGKGDRVAIWAPNSPHWVIAALGALKAGAV 81 (513)
T ss_pred cccHHHHHHHHHHHCCCCeEEEeC--CCceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHHHHHHHHHHhcCeE
Confidence 478999999999999999999997 889999999999999999999999999999999999999999999999999999
Q ss_pred EeecCCCCCHHHHHHHHHhcCceEEEEcccchHHHHhhhhhcC-c-eEEEeCCCCC-----CccchhhhhhhcccCCCCc
Q 014952 104 STTANPFYTPPEIAKQAIASKAKIIITQAVYNDKVRDLSEHHG-A-RIVTIDPPPE-----NCLHFSELITQADENEIPA 176 (415)
Q Consensus 104 ~v~l~~~~~~~~~~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~-~-~~i~~~~~~~-----~~~~~~~l~~~~~~~~~~~ 176 (415)
++|+++..+.+++.++++++++++++++....+.......... . .++....... ....++++..... ...+.
T Consensus 82 ~v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 160 (513)
T PRK07656 82 VVPLNTRYTADEAAYILARGDAKALFVLGLFLGVDYSATTRLPALEHVVICETEEDDPHTEKMKTFTDFLAAGD-PAERA 160 (513)
T ss_pred EEecCcccCHHHHHHHHhhcCceEEEEchhhHHHHHHHHhccCCccEEEEEcCcccccCccccccHHHHHhcCC-CCCCc
Confidence 9999999999999999999999999999887666554432221 2 2333322111 1234555532222 12233
Q ss_pred ccCCCCCeEEEecCCCCCCCCceeeechHHHHHHHhhhhcCCCCCccCCCCcEEEEccchHHHHhhHHHHHHHHHcCcEE
Q 014952 177 VKINPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAI 256 (415)
Q Consensus 177 ~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~l~~l~~G~~~ 256 (415)
....++++++|+|||||||.||+|.++|.++......... .+.+.++++++...|++|.+++...++.++..|+++
T Consensus 161 ~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~G~~~ 236 (513)
T PRK07656 161 PEVDPDDVADILFTSGTTGRPKGAMLTHRQLLSNAADWAE----YLGLTEGDRYLAANPFFHVFGYKAGVNAPLMRGATI 236 (513)
T ss_pred CCCCCCceEEEEeCCCCCCCCCEEEEecHHHHHHHHHHHH----hhCCCCCCeEEEccchHHHHHHHHHHHHHHHcCceE
Confidence 4567789999999999999999999999999888777665 456788999999999999999887789999999999
Q ss_pred EEcCCCCHHHHHHHHHhcCceeeecchHHHHHHHcCCCCCCCCcccceeeeecCCCCCHHHHHHHHhhCCCC-ccccccc
Q 014952 257 LIMQKFDIVKLMELVQKYKVTVAPFVPPIVLAVAKSGDVDKYDMSSIRTVMSGAAPMGKELEDAVRAKLPHA-KLGQGYG 335 (415)
Q Consensus 257 v~~~~~~~~~~~~~l~~~~~t~l~~~p~~l~~l~~~~~~~~~~l~~lr~v~~gG~~l~~~~~~~~~~~~~~~-~~~~~YG 335 (415)
++.+.+++..+++.++++++|++.++|.++..+++........++++|.+++||++++.++.+++.+.+ +. .+++.||
T Consensus 237 ~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~l~~v~~~g~~~~~~~~~~~~~~~-~~~~~~~~YG 315 (513)
T PRK07656 237 LPLPVFDPDEVFRLIETERITVLPGPPTMYNSLLQHPDRSAEDLSSLRLAVTGAASMPVALLERFESEL-GVDIVLTGYG 315 (513)
T ss_pred EecCcCCHHHHHHHHHHhCCeEEechHHHHHHHHcCCCcCCCCccceeeEEecCCCCCHHHHHHHHHHc-CCCceEeEEc
Confidence 998888999999999999999999999999999988776667889999999999999999999999999 56 8999999
Q ss_pred cccCCccccccccccCCccccCCCcccccccCCeEEEEeCCCCCCCCCCCceeEEEecCccccccccCCcceeeee
Q 014952 336 MTEAGPVLSMCLAFAKEPFEIKSGACGTVVRNAEMKIVDPDTGISLPRNQAGEICIRGAQIMKGTYHIYAPFLLSI 411 (415)
Q Consensus 336 ~tE~~~~~~~~~~~~~~~~~~~~~~~G~p~~~~~v~i~d~~~~~~~~~g~~Gel~v~~~~~~~gY~~~~~~~~~~~ 411 (415)
+||++++.+.+... ......++++|+|+++++++|+| +++++++.|+.|||+++|+.++.||+++++.+...|
T Consensus 316 ~tE~~~~~~~~~~~--~~~~~~~~~vG~~~~~~~~~i~d-~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~ 388 (513)
T PRK07656 316 LSEASGVTTFNRLD--DDRKTVAGTIGTAIAGVENKIVN-ELGEEVPVGEVGELLVRGPNVMKGYYDDPEATAAAI 388 (513)
T ss_pred cccCCCceeecCcc--ccccccCCCccccCCCcEEEEEC-CCCCCCCCCCceEEEEEcchhhhhhcCCHHHHhhhh
Confidence 99998777655211 11112267899999999999999 558999999999999999999999999987776544
No 30
>PRK04319 acetyl-CoA synthetase; Provisional
Probab=100.00 E-value=1.9e-50 Score=401.19 Aligned_cols=382 Identities=24% Similarity=0.362 Sum_probs=312.0
Q ss_pred CCCCCCCCCHHh-HHHhhhc-cCCCCcEEEeCC--CCCeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHH
Q 014952 18 DIYIPNHLPLHT-YCFENIS-QFADRPCIINGP--TGDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFA 93 (415)
Q Consensus 18 ~~~~~~~~tl~~-~l~~~a~-~~p~~~a~~~~~--~~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~ 93 (415)
+|.....+|+.. .+.++++ .+|+++|+++.+ ..+.+||+||.++++++|+.|.++|+++||+|+++++|+.+++++
T Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~i~~~n~~~~~~~ 114 (570)
T PRK04319 35 SWLETGKVNIAYEAIDRHADGGRKDKVALRYLDASRKEKYTYKELKELSNKFANVLKELGVEKGDRVFIFMPRIPELYFA 114 (570)
T ss_pred ccCCCCceeHHHHHHHHhhccCCCCceEEEEECCCCceeecHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHHHHH
Confidence 454455677774 6666665 479999998753 246899999999999999999999999999999999999999999
Q ss_pred HHHHHHhCCeEeecCCCCCHHHHHHHHHhcCceEEEEcccchHHHHhhhhhcCc-eEEEeCCCC---CCccchhhhhhhc
Q 014952 94 FLGASYIGATSTTANPFYTPPEIAKQAIASKAKIIITQAVYNDKVRDLSEHHGA-RIVTIDPPP---ENCLHFSELITQA 169 (415)
Q Consensus 94 ~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~-~~i~~~~~~---~~~~~~~~l~~~~ 169 (415)
+|||+++|++++|+++.++.+++.++++++++++++++.......... ..... .++.++... .....+++++..
T Consensus 115 ~la~~~~G~v~vpl~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 192 (570)
T PRK04319 115 LLGALKNGAIVGPLFEAFMEEAVRDRLEDSEAKVLITTPALLERKPAD-DLPSLKHVLLVGEDVEEGPGTLDFNALMEQ- 192 (570)
T ss_pred HHHHHHcCcEEcccccccCHHHHHHHHHccCCcEEEEChhhhhccchh-cCCCceEEEEECCCcCCCcCccCHHHHHhh-
Confidence 999999999999999999999999999999999999987765443221 11122 344444321 233455555222
Q ss_pred ccCCCCcccCCCCCeEEEecCCCCCCCCceeeechHHHHHHHhhhhcCCCCCccCCCCcEEEEccchHHHHhhHHHHHHH
Q 014952 170 DENEIPAVKINPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCA 249 (415)
Q Consensus 170 ~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~l~~ 249 (415)
.....+.....+++.++|+|||||||.||+|.++|+++......... .+.+.+++++++..|++|..+....++.+
T Consensus 193 ~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~s~~~l~~~~~~~~~----~~~~~~~d~~~~~~~~~~~~g~~~~~~~~ 268 (570)
T PRK04319 193 ASDEFDIEWTDREDGAILHYTSGSTGKPKGVLHVHNAMLQHYQTGKY----VLDLHEDDVYWCTADPGWVTGTSYGIFAP 268 (570)
T ss_pred cCCcCCccccCCCCCEEEEeCCCCCCCCCEEEEecHHHHHHHHHHHH----hcCCCCCceEEecCChHHhhCchHHHHHH
Confidence 22223334456789999999999999999999999999887766655 44678899999999999999887778899
Q ss_pred HHcCcEEEEcC-CCCHHHHHHHHHhcCceeeecchHHHHHHHcCCC--CCCCCcccceeeeecCCCCCHHHHHHHHhhCC
Q 014952 250 LRVGAAILIMQ-KFDIVKLMELVQKYKVTVAPFVPPIVLAVAKSGD--VDKYDMSSIRTVMSGAAPMGKELEDAVRAKLP 326 (415)
Q Consensus 250 l~~G~~~v~~~-~~~~~~~~~~l~~~~~t~l~~~p~~l~~l~~~~~--~~~~~l~~lr~v~~gG~~l~~~~~~~~~~~~~ 326 (415)
+..|+++++.+ .+++..+++.++++++|+++++|.+++.|.+... ....++++||.+++||+++++++.+++++.+
T Consensus 269 l~~G~~~v~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~~~~gG~~l~~~~~~~~~~~~- 347 (570)
T PRK04319 269 WLNGATNVIDGGRFSPERWYRILEDYKVTVWYTAPTAIRMLMGAGDDLVKKYDLSSLRHILSVGEPLNPEVVRWGMKVF- 347 (570)
T ss_pred HhcCceEEEECCCCCHHHHHHHHHHcCCeEEEeCHHHHHHHHhcCCcccccCCcccceEEEEcccCCCHHHHHHHHHHh-
Confidence 99999998875 5899999999999999999999999999987543 2345688999999999999999999999998
Q ss_pred CCccccccccccCCccccccccccCCccccCCCcccccccCCeEEEEeCCCCCCCCCCCceeEEEec--CccccccccCC
Q 014952 327 HAKLGQGYGMTEAGPVLSMCLAFAKEPFEIKSGACGTVVRNAEMKIVDPDTGISLPRNQAGEICIRG--AQIMKGTYHIY 404 (415)
Q Consensus 327 ~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~G~p~~~~~v~i~d~~~~~~~~~g~~Gel~v~~--~~~~~gY~~~~ 404 (415)
+.++++.||+||++++..... ......++++|+|+|+++++|+| +++.+++.|+.|||+++| |.++.|||+++
T Consensus 348 g~~i~~~YG~tE~~~~~~~~~----~~~~~~~~~~G~p~~g~~~~i~d-~~~~~~~~g~~Gel~i~~~~~~~~~GY~~~~ 422 (570)
T PRK04319 348 GLPIHDNWWMTETGGIMIANY----PAMDIKPGSMGKPLPGIEAAIVD-DQGNELPPNRMGNLAIKKGWPSMMRGIWNNP 422 (570)
T ss_pred CCCeEeceeecccCCEEEecC----CCCCCCCCcCcCCCCCCEEEEEC-CCCCCCCCCCceEEEEcCCCChHHhHhcCCH
Confidence 789999999999987544321 11234568899999999999999 558889999999999997 89999999999
Q ss_pred cceeeee
Q 014952 405 APFLLSI 411 (415)
Q Consensus 405 ~~~~~~~ 411 (415)
+.+.+.|
T Consensus 423 ~~~~~~~ 429 (570)
T PRK04319 423 EKYESYF 429 (570)
T ss_pred HHhhhhh
Confidence 9988765
No 31
>PRK09274 peptide synthase; Provisional
Probab=100.00 E-value=7.2e-51 Score=403.05 Aligned_cols=377 Identities=20% Similarity=0.307 Sum_probs=297.4
Q ss_pred CCCHHhHHHhhhccCCCCcEEEeCCCC--------CeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHH
Q 014952 24 HLPLHTYCFENISQFADRPCIINGPTG--------DVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFL 95 (415)
Q Consensus 24 ~~tl~~~l~~~a~~~p~~~a~~~~~~~--------~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~l 95 (415)
.+|+.+.+.+.++++|+++|+++.+.+ +.+||+||.++++++|++|.++|+++||+|+++++|+.+++++++
T Consensus 5 ~~~~~~~l~~~a~~~p~~~a~~~~~~~~~~~~~~~~~~Ty~~l~~~~~~~A~~L~~~g~~~gd~V~~~~~n~~~~~~~~l 84 (552)
T PRK09274 5 MANIARHLPRAAQERPDQLAVAVPGGRGADGKLAYDELSFAELDARSDAIAHGLNAAGIGRGMRAVLMVTPSLEFFALTF 84 (552)
T ss_pred hhhHHHHHHHHHHhCCCcceEEeccCCCCccccccCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCcHHHHHHHH
Confidence 378899999999999999999986322 289999999999999999999999999999999999999999999
Q ss_pred HHHHhCCeEeecCCCCCHHHHHHHHHhcCceEEEEccc--chHHHHhhhhhcCceEEEeCCC-CCCccchhhhhhhcccC
Q 014952 96 GASYIGATSTTANPFYTPPEIAKQAIASKAKIIITQAV--YNDKVRDLSEHHGARIVTIDPP-PENCLHFSELITQADEN 172 (415)
Q Consensus 96 A~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~vl~~~~--~~~~~~~~~~~~~~~~i~~~~~-~~~~~~~~~l~~~~~~~ 172 (415)
||+++|++++|++|.++.+++.++++++++++++++++ ....+..........++.++.. ......++++.......
T Consensus 85 a~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 164 (552)
T PRK09274 85 ALFKAGAVPVLVDPGMGIKNLKQCLAEAQPDAFIGIPKAHLARRLFGWGKPSVRRLVTVGGRLLWGGTTLATLLRDGAAA 164 (552)
T ss_pred HHHHcCeEEEEcCCCccHHHHHHHHHhcCCCEEEeccHHHHHHHHhccCccchhheeccccccccCCccHHHhcccCccc
Confidence 99999999999999999999999999999999998752 2222211110011123333321 11222344442121112
Q ss_pred CCCcccCCCCCeEEEecCCCCCCCCceeeechHHHHHHHhhhhcCCCCCccCCCCcEEEEccchHHHHhhHHHHHHHHHc
Q 014952 173 EIPAVKINPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRV 252 (415)
Q Consensus 173 ~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~l~~l~~ 252 (415)
........++++++|+|||||||.||+|.++|+++...+..... .+.+.++++.++..|++|.+++ ..
T Consensus 165 ~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~----~~~~~~~~~~~~~~pl~~~~~~--------~~ 232 (552)
T PRK09274 165 PFPMADLAPDDMAAILFTSGSTGTPKGVVYTHGMFEAQIEALRE----DYGIEPGEIDLPTFPLFALFGP--------AL 232 (552)
T ss_pred cCCCCCCCCCCeEEEEECCCCCCCCceEEecHHHHHHHHHHHHH----HhCCCCCceeeeccCHHHhhhh--------hh
Confidence 22233456789999999999999999999999999988877666 4467888999999999875443 34
Q ss_pred CcEEEEcC-------CCCHHHHHHHHHhcCceeeecchHHHHHHHcCCCCCCCCcccceeeeecCCCCCHHHHHHHHhhC
Q 014952 253 GAAILIMQ-------KFDIVKLMELVQKYKVTVAPFVPPIVLAVAKSGDVDKYDMSSIRTVMSGAAPMGKELEDAVRAKL 325 (415)
Q Consensus 253 G~~~v~~~-------~~~~~~~~~~l~~~~~t~l~~~p~~l~~l~~~~~~~~~~l~~lr~v~~gG~~l~~~~~~~~~~~~ 325 (415)
|+++++.+ .+++..+++.++++++|+++++|.++..|.+.......+++++|.+++||+++++++.+++++.|
T Consensus 233 g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~lr~~~~gG~~~~~~~~~~~~~~~ 312 (552)
T PRK09274 233 GMTSVIPDMDPTRPATVDPAKLFAAIERYGVTNLFGSPALLERLGRYGEANGIKLPSLRRVISAGAPVPIAVIERFRAML 312 (552)
T ss_pred CCeEEecCcccccccccCHHHHHHHHHHcCCeEEeccHHHHHHHHHHhhhcCCCCchhhEEEecCCcCCHHHHHHHHHHc
Confidence 77777754 36889999999999999999999999999887655566889999999999999999999999999
Q ss_pred C-CCccccccccccCCccccccccc-c----CCccccCCCcccccccCCeEEEEeCC--------CCCCCCCCCceeEEE
Q 014952 326 P-HAKLGQGYGMTEAGPVLSMCLAF-A----KEPFEIKSGACGTVVRNAEMKIVDPD--------TGISLPRNQAGEICI 391 (415)
Q Consensus 326 ~-~~~~~~~YG~tE~~~~~~~~~~~-~----~~~~~~~~~~~G~p~~~~~v~i~d~~--------~~~~~~~g~~Gel~v 391 (415)
+ ++++++.||+||++++.+..... . .........++|+|+|+++++|+|++ ++++++.|+.|||+|
T Consensus 313 ~~~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~ivd~~~~~~~~~~~~~~~~~g~~Gel~v 392 (552)
T PRK09274 313 PPDAEILTPYGATEALPISSIESREILFATRAATDNGAGICVGRPVDGVEVRIIAISDAPIPEWDDALRLATGEIGEIVV 392 (552)
T ss_pred CCCceEEccccccccceeEeecchhhhccccccccCCCCcccCccCCCceEEEEeccccccccccccccCCCCCeeEEEE
Confidence 6 37999999999998755433110 0 00011122478999999999999953 467899999999999
Q ss_pred ecCccccccccCCcceeeeee
Q 014952 392 RGAQIMKGTYHIYAPFLLSIV 412 (415)
Q Consensus 392 ~~~~~~~gY~~~~~~~~~~~~ 412 (415)
+||.++.|||++|+.+..+|+
T Consensus 393 ~g~~~~~GY~~~~~~t~~~~~ 413 (552)
T PRK09274 393 AGPMVTRSYYNRPEATRLAKI 413 (552)
T ss_pred ecCcccccccCChHHhhhhhc
Confidence 999999999999998877663
No 32
>PTZ00237 acetyl-CoA synthetase; Provisional
Probab=100.00 E-value=1.2e-50 Score=406.04 Aligned_cols=384 Identities=19% Similarity=0.257 Sum_probs=297.2
Q ss_pred CCCCCCCCCCHHhHHHhh-hcc--CCCCcEEEeCCC----CCeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchh
Q 014952 17 PDIYIPNHLPLHTYCFEN-ISQ--FADRPCIINGPT----GDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQ 89 (415)
Q Consensus 17 ~~~~~~~~~tl~~~l~~~-a~~--~p~~~a~~~~~~----~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~ 89 (415)
+.|.....+|....+.++ ++. +|+++|+++... .+++||+||.++++++|+.|+++|+++||+|+++++|+++
T Consensus 50 ~~wf~~~~~n~~~~~l~~~~~~~~~~~~~A~~~~~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GDrV~i~~~n~~e 129 (647)
T PTZ00237 50 PDWFKGGELNTCYNVLDIHVKNPLKRDQDALIYECPYLKKTIKLTYYQLYEKVCEFSRVLLNLNISKNDNVLIYMANTLE 129 (647)
T ss_pred hhhCCCCeeeHHHHHHHHhhcccCCCCceEEEEEcCCCCceEEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHH
Confidence 456666677777666544 433 799999987421 3689999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhCCeEeecCCCCCHHHHHHHHHhcCceEEEEccc---------chHHHHhhhhhc---CceEEEeCC-C-
Q 014952 90 FVFAFLGASYIGATSTTANPFYTPPEIAKQAIASKAKIIITQAV---------YNDKVRDLSEHH---GARIVTIDP-P- 155 (415)
Q Consensus 90 ~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~vl~~~~---------~~~~~~~~~~~~---~~~~i~~~~-~- 155 (415)
+++++|||+++|++++|+++.++.+++.+++++++++++|+++. ..+.+.+..... ..+++.+.. .
T Consensus 130 ~~~~~lA~~~~Gav~vpl~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~ 209 (647)
T PTZ00237 130 PLIAMLSCARIGATHCVLFDGYSVKSLIDRIETITPKLIITTNYGILNDEIITFTPNLKEAIELSTFKPSNVITLFRNDI 209 (647)
T ss_pred HHHHHHHHHHhCcEEEeeCCCCCHHHHHHHHHhcCCCEEEEcccceeCCceechHHHHHHHHhcccCCCCEEEEEEcCCc
Confidence 99999999999999999999999999999999999999999752 222232222211 123443311 0
Q ss_pred --------------CCCccchhhhhhhc----ccCCCCcccCCCCCeEEEecCCCCCCCCceeeechHHHHHHHhhh-hc
Q 014952 156 --------------PENCLHFSELITQA----DENEIPAVKINPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQ-VD 216 (415)
Q Consensus 156 --------------~~~~~~~~~l~~~~----~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~-~~ 216 (415)
......+++++... .....+.....++++++|+|||||||.||||+++|.+.+...... ..
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~IlyTSGTTG~PKgV~~sh~~~l~~~~~~~~~ 289 (647)
T PTZ00237 210 TSESDLKKIETIPTIPNTLSWYDEIKKIKENNQSPFYEYVPVESSHPLYILYTSGTTGNSKAVVRSNGPHLVGLKYYWRS 289 (647)
T ss_pred ccccccccccccCCCcccccHHHHHhhhccccCCCCCCceeeCCCCcEEEEEcCCCCCCCCeEEEcCcHHHHHHHHHHHH
Confidence 01123455542211 111122345677999999999999999999999999843333222 22
Q ss_pred CCCCCccCCCCcEEEEccchHHHHhhHHHHHHHHHcCcEEEEcCC--CC----HHHHHHHHHhcCceeeecchHHHHHHH
Q 014952 217 GENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIMQK--FD----IVKLMELVQKYKVTVAPFVPPIVLAVA 290 (415)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~l~~l~~G~~~v~~~~--~~----~~~~~~~l~~~~~t~l~~~p~~l~~l~ 290 (415)
.+....++++++..|++|+.+.. .++.++..|+++++.+. +. +..+++.++++++|++.++|.+++.|+
T Consensus 290 ----~~~~~~~d~~~~~~~~~w~~~~~-~~~~~l~~G~t~v~~~~~~~~p~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~ 364 (647)
T PTZ00237 290 ----IIEKDIPTVVFSHSSIGWVSFHG-FLYGSLSLGNTFVMFEGGIIKNKHIEDDLWNTIEKHKVTHTLTLPKTIRYLI 364 (647)
T ss_pred ----hcCCCCCcEEEEcCCCceEeeHH-HHHHHHhCCcEEEEeCCCCCCCCCchHHHHHHHHHhCeEEEEeCHHHHHHHH
Confidence 23456789999999999987655 57889999999998763 12 688999999999999999999999998
Q ss_pred cCCC-----CCCCCcccceeeeecCCCCCHHHHHHHHhhCCCCccccccccccCCccccccccccCCccccCCCcccccc
Q 014952 291 KSGD-----VDKYDMSSIRTVMSGAAPMGKELEDAVRAKLPHAKLGQGYGMTEAGPVLSMCLAFAKEPFEIKSGACGTVV 365 (415)
Q Consensus 291 ~~~~-----~~~~~l~~lr~v~~gG~~l~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~G~p~ 365 (415)
+... ....++++||.+++||+++++++.+++++.+ ++++++.||+||+++...... .......+++|+|+
T Consensus 365 ~~~~~~~~~~~~~~l~~Lr~i~~~G~~l~~~~~~~~~~~~-g~~i~~~yG~TE~~~~~~~~~----~~~~~~~~s~G~p~ 439 (647)
T PTZ00237 365 KTDPEATIIRSKYDLSNLKEIWCGGEVIEESIPEYIENKL-KIKSSRGYGQTEIGITYLYCY----GHINIPYNATGVPS 439 (647)
T ss_pred hhCccccccccccCcchheEEEecCccCCHHHHHHHHHhc-CCCEEeeechHHhChhhhccC----CCCCCCCCCCccCc
Confidence 7532 2345789999999999999999999999999 799999999999986443321 11223347899999
Q ss_pred cCCeEEEEeCCCCCCCCCCCceeEEEecC---ccccccccCCcceeeee
Q 014952 366 RNAEMKIVDPDTGISLPRNQAGEICIRGA---QIMKGTYHIYAPFLLSI 411 (415)
Q Consensus 366 ~~~~v~i~d~~~~~~~~~g~~Gel~v~~~---~~~~gY~~~~~~~~~~~ 411 (415)
|+++++|+| ++|++++.|+.|||++++| +++.|||+||+++...|
T Consensus 440 ~g~~~~i~d-~~g~~~~~ge~GEl~v~~p~~p~~~~gy~~~~~~~~~~f 487 (647)
T PTZ00237 440 IFIKPSILS-EDGKELNVNEIGEVAFKLPMPPSFATTFYKNDEKFKQLF 487 (647)
T ss_pred CCceEEEEC-CCCCCCCCCCceEEEEeccCCchhhCceeCCHHHHHHHH
Confidence 999999999 4699999999999999986 78999999999887544
No 33
>PRK08180 feruloyl-CoA synthase; Reviewed
Probab=100.00 E-value=2.1e-50 Score=403.38 Aligned_cols=370 Identities=18% Similarity=0.210 Sum_probs=292.7
Q ss_pred CCCHHhHHHhhhccCCCCcEEEeCC---CCCeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHHh
Q 014952 24 HLPLHTYCFENISQFADRPCIINGP---TGDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYI 100 (415)
Q Consensus 24 ~~tl~~~l~~~a~~~p~~~a~~~~~---~~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~ 100 (415)
..|+.+.|.++++++|+++++++.+ ..+.+||+||.++++++|++|.++|+++||+|+++++|++++++++|||+++
T Consensus 38 ~~~l~~~l~~~a~~~p~~~a~~~~~~~~~~~~~Ty~el~~~v~~~A~~L~~~Gv~~gd~Vai~~~n~~e~~~~~lA~~~~ 117 (614)
T PRK08180 38 PRRLTDRLVHWAQEAPDRVFLAERGADGGWRRLTYAEALERVRAIAQALLDRGLSAERPLMILSGNSIEHALLALAAMYA 117 (614)
T ss_pred CccHHHHHHHHHHHCCCCceeeeccCCCceeEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEecCCCHHHHHHHHHHHHc
Confidence 4789999999999999999998752 1268999999999999999999999999999999999999999999999999
Q ss_pred CCeEeecCCCCC-----HHHHHHHHHhcCceEEEEcccc--hHHHHhhhhhcCceEEEeCCCCC--Cccchhhhhhhccc
Q 014952 101 GATSTTANPFYT-----PPEIAKQAIASKAKIIITQAVY--NDKVRDLSEHHGARIVTIDPPPE--NCLHFSELITQADE 171 (415)
Q Consensus 101 G~~~v~l~~~~~-----~~~~~~~l~~~~~~~vl~~~~~--~~~~~~~~~~~~~~~i~~~~~~~--~~~~~~~l~~~~~~ 171 (415)
|++++|+++.++ .+++.++++++++++++++... ...+.... ....+++..+.... ....++++......
T Consensus 118 Gav~vpl~~~~~~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 196 (614)
T PRK08180 118 GVPYAPVSPAYSLVSQDFGKLRHVLELLTPGLVFADDGAAFARALAAVV-PADVEVVAVRGAVPGRAATPFAALLATPPT 196 (614)
T ss_pred CCeEeeeccccccccCCHHHHHHHHhcCCCcEEEEcCHHHHHHHHhhhc-cCCceEEEecCCCCCcccccHHHHhccccc
Confidence 999999999988 7899999999999999997542 22222111 11234444433211 12456665322111
Q ss_pred CC--CCcccCCCCCeEEEecCCCCCCCCceeeechHHHHHHHhhhhcCCCCCccCC--CCcEEEEccchHHHHhhHHHHH
Q 014952 172 NE--IPAVKINPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLH--KEDVILCVLPLFHIYSLNSVLL 247 (415)
Q Consensus 172 ~~--~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~--~~~~~~~~~pl~~~~g~~~~~l 247 (415)
.. .......++++++|+|||||||.||||++||+++..+.......+ ... ..+++++.+|++|.+++...++
T Consensus 197 ~~~~~~~~~~~~~d~a~ilyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~----~~~~~~~~~~l~~lPl~h~~g~~~~~~ 272 (614)
T PRK08180 197 AAVDAAHAAVGPDTIAKFLFTSGSTGLPKAVINTHRMLCANQQMLAQTF----PFLAEEPPVLVDWLPWNHTFGGNHNLG 272 (614)
T ss_pred cchhhhccCCCcCceEEEEECCCCCCCCCEEEeehHHHHHHHHHHHhhc----cccCCCCcEEEEecchHHHhhHHHHHH
Confidence 11 111234678999999999999999999999999998877665522 232 5689999999999999876778
Q ss_pred HHHHcCcEEEEcCC-CCH---HHHHHHHHhcCceeeecchHHHHHHHcCCC----CCCCCcccceeeeecCCCCCHHHHH
Q 014952 248 CALRVGAAILIMQK-FDI---VKLMELVQKYKVTVAPFVPPIVLAVAKSGD----VDKYDMSSIRTVMSGAAPMGKELED 319 (415)
Q Consensus 248 ~~l~~G~~~v~~~~-~~~---~~~~~~l~~~~~t~l~~~p~~l~~l~~~~~----~~~~~l~~lr~v~~gG~~l~~~~~~ 319 (415)
.++..|+++++.+. +++ ..+++.++++++|+++++|.++..|++... .....+++||.+++||+++++++.+
T Consensus 273 ~~l~~G~~v~~~~~~~~~~~~~~~l~~i~~~~~t~~~~vP~~~~~l~~~~~~~~~~~~~~~~~lr~v~~gGa~l~~~~~~ 352 (614)
T PRK08180 273 IVLYNGGTLYIDDGKPTPGGFDETLRNLREISPTVYFNVPKGWEMLVPALERDAALRRRFFSRLKLLFYAGAALSQDVWD 352 (614)
T ss_pred HHHhcCCEEEEeCCCccchhHHHHHHHHHHhCCcEEechHHHHHHHHHHHHhchhhhhhhccceeEEEEccCCCCHHHHH
Confidence 89999999998763 443 467889999999999999999988876422 2234578999999999999999999
Q ss_pred HHHhh----CC-CCccccccccccCCccccccccccCCccccCCCcccccccCCeEEEEeCCCCCCCCCCCceeEEEecC
Q 014952 320 AVRAK----LP-HAKLGQGYGMTEAGPVLSMCLAFAKEPFEIKSGACGTVVRNAEMKIVDPDTGISLPRNQAGEICIRGA 394 (415)
Q Consensus 320 ~~~~~----~~-~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~G~p~~~~~v~i~d~~~~~~~~~g~~Gel~v~~~ 394 (415)
++++. ++ +.++++.||+||++++++.. .......+++|+|+||++++|+|+ |+.|||+|+||
T Consensus 353 ~~~~~~~~~~g~~~~l~~~YG~TE~~~~~~~~-----~~~~~~~~svG~p~pg~~v~i~d~--------~~~GEi~vrg~ 419 (614)
T PRK08180 353 RLDRVAEATCGERIRMMTGLGMTETAPSATFT-----TGPLSRAGNIGLPAPGCEVKLVPV--------GGKLEVRVKGP 419 (614)
T ss_pred HHHHHHHhhcCCCceeeeeecccccCCceEec-----ccccCCCCcccCccCCcEEEEecC--------CCCcEEEEecC
Confidence 99875 31 36789999999998765543 112345789999999999999983 34599999999
Q ss_pred ccccccccCCcceeeee
Q 014952 395 QIMKGTYHIYAPFLLSI 411 (415)
Q Consensus 395 ~~~~gY~~~~~~~~~~~ 411 (415)
+++.|||++|+.+...|
T Consensus 420 ~v~~GY~~~p~~t~~~~ 436 (614)
T PRK08180 420 NVTPGYWRAPELTAEAF 436 (614)
T ss_pred ccchhhcCChhHhHhhc
Confidence 99999999999987766
No 34
>PRK07529 AMP-binding domain protein; Validated
Probab=100.00 E-value=1.6e-49 Score=397.95 Aligned_cols=376 Identities=27% Similarity=0.379 Sum_probs=301.5
Q ss_pred CCCHHhHHHhhhccCCCCcEEEeC------CCCCeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHH
Q 014952 24 HLPLHTYCFENISQFADRPCIING------PTGDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGA 97 (415)
Q Consensus 24 ~~tl~~~l~~~a~~~p~~~a~~~~------~~~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~ 97 (415)
..|+.++|.+.++++|+++|+++. +..+++||+||.++++++|+.|+++|+++||+|+++++|+.++++++|||
T Consensus 24 ~~t~~~~l~~~a~~~p~~~Al~~~~~~~~~~~~~~~Ty~eL~~~v~~~A~~L~~~Gi~~gd~V~i~~~n~~e~~~~~lA~ 103 (632)
T PRK07529 24 PASTYELLSRAAARHPDAPALSFLLDADPLDRPETWTYAELLADVTRTANLLHSLGVGPGDVVAFLLPNLPETHFALWGG 103 (632)
T ss_pred CCCHHHHHHHHHHHCCCCceEEeecccCCCCCCceeEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHH
Confidence 368999999999999999999863 13579999999999999999999999999999999999999999999999
Q ss_pred HHhCCeEeecCCCCCHHHHHHHHHhcCceEEEEcccch-----HHHHhhhhh-cCc-eEEEeCCCC--------------
Q 014952 98 SYIGATSTTANPFYTPPEIAKQAIASKAKIIITQAVYN-----DKVRDLSEH-HGA-RIVTIDPPP-------------- 156 (415)
Q Consensus 98 ~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~vl~~~~~~-----~~~~~~~~~-~~~-~~i~~~~~~-------------- 156 (415)
+++| +++|+++.++.+++.++++++++++++++.... +++...... ... .++.++...
T Consensus 104 ~~~G-i~~pi~~~~~~~~i~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~ 182 (632)
T PRK07529 104 EAAG-IANPINPLLEPEQIAELLRAAGAKVLVTLGPFPGTDIWQKVAEVLAALPELRTVVEVDLARYLPGPKRLAVPLIR 182 (632)
T ss_pred HHhC-EEEeCCCcCCHHHHHHHHHhcCCcEEEEeCCCCCchHHHHHHHHHhcCCcceeEEEecCcccccccccccccccc
Confidence 9999 569999999999999999999999999986532 233222221 122 234443221
Q ss_pred ----CCccchhhhhhhcccCC-CCcccCCCCCeEEEecCCCCCCCCceeeechHHHHHHHhhhhcCCCCCccCCCCcEEE
Q 014952 157 ----ENCLHFSELITQADENE-IPAVKINPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVIL 231 (415)
Q Consensus 157 ----~~~~~~~~l~~~~~~~~-~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 231 (415)
.....+.+.+....... .......++++++|+|||||||.||+|.++|+++..+...... .+.+.++++++
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~a~i~~TSGTTG~PK~v~~sh~~l~~~~~~~~~----~~~~~~~d~~l 258 (632)
T PRK07529 183 RKAHARILDFDAELARQPGDRLFSGRPIGPDDVAAYFHTGGTTGMPKLAQHTHGNEVANAWLGAL----LLGLGPGDTVF 258 (632)
T ss_pred cccccccCCHHHHHhcCCCccccccCCCCcCceEEEEECCCccCcCCEEEEcHHHHHHHHHHHHH----hcCCCCCCEEE
Confidence 12234444422222111 1223346799999999999999999999999999887765554 34568899999
Q ss_pred EccchHHHHhhHHHHHHHHHcCcEEEEcCCC---C---HHHHHHHHHhcCceeeecchHHHHHHHcCCCCCCCCccccee
Q 014952 232 CVLPLFHIYSLNSVLLCALRVGAAILIMQKF---D---IVKLMELVQKYKVTVAPFVPPIVLAVAKSGDVDKYDMSSIRT 305 (415)
Q Consensus 232 ~~~pl~~~~g~~~~~l~~l~~G~~~v~~~~~---~---~~~~~~~l~~~~~t~l~~~p~~l~~l~~~~~~~~~~l~~lr~ 305 (415)
+.+|++|..+....++.++..|+++++.++. + ...+++.++++++|++.++|.++..|++.+. ...++++||.
T Consensus 259 ~~~pl~h~~~~~~~~~~~l~~G~~vv~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~-~~~~~~slr~ 337 (632)
T PRK07529 259 CGLPLFHVNALLVTGLAPLARGAHVVLATPQGYRGPGVIANFWKIVERYRINFLSGVPTVYAALLQVPV-DGHDISSLRY 337 (632)
T ss_pred EecCchhhhHHHHHHHHHHHCCCEEEecCccccCcchHHHHHHHHHHHhCCeEEEeHHHHHHHHHhCcc-cCCCccceEE
Confidence 9999999999887788999999999998642 2 3578999999999999999999999987653 2356899999
Q ss_pred eeecCCCCCHHHHHHHHhhCCCCccccccccccCCccccccccccCCccccCCCcccccccCCeEEEEeC-CCC---CCC
Q 014952 306 VMSGAAPMGKELEDAVRAKLPHAKLGQGYGMTEAGPVLSMCLAFAKEPFEIKSGACGTVVRNAEMKIVDP-DTG---ISL 381 (415)
Q Consensus 306 v~~gG~~l~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~G~p~~~~~v~i~d~-~~~---~~~ 381 (415)
+++||+++++++.+++++.+ ++++++.||+||+++++..+. .......+++|+|+|+++++|++. +++ ++|
T Consensus 338 v~~gg~~l~~~l~~~~~~~~-g~~l~~~YG~TE~~~~~~~~~----~~~~~~~~svG~~~p~~~v~i~~~d~~g~~~~~~ 412 (632)
T PRK07529 338 ALCGAAPLPVEVFRRFEAAT-GVRIVEGYGLTEATCVSSVNP----PDGERRIGSVGLRLPYQRVRVVILDDAGRYLRDC 412 (632)
T ss_pred EEEcCCCCCHHHHHHHHHHh-CCcEeeeecccccCcccccCC----ccccccCCCcccccCCceEEEEEcCCCCcccccC
Confidence 99999999999999999999 899999999999987654431 122346789999999999999532 335 789
Q ss_pred CCCCceeEEEecCccccccccCCcceeeee
Q 014952 382 PRNQAGEICIRGAQIMKGTYHIYAPFLLSI 411 (415)
Q Consensus 382 ~~g~~Gel~v~~~~~~~gY~~~~~~~~~~~ 411 (415)
+.|+.|||+|+||+++.||+++++ +...|
T Consensus 413 ~~g~~Gel~v~gp~v~~GY~~~~~-~~~~~ 441 (632)
T PRK07529 413 AVDEVGVLCIAGPNVFSGYLEAAH-NKGLW 441 (632)
T ss_pred CCCCceEEEEECCCccccccCCcc-ccccc
Confidence 999999999999999999998754 44443
No 35
>PRK10524 prpE propionyl-CoA synthetase; Provisional
Probab=100.00 E-value=6.3e-50 Score=401.73 Aligned_cols=391 Identities=19% Similarity=0.276 Sum_probs=306.7
Q ss_pred CCCCCCCCCCH-HhHHHhhhccCCCCcEEEeCC----CCCeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHH
Q 014952 17 PDIYIPNHLPL-HTYCFENISQFADRPCIINGP----TGDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFV 91 (415)
Q Consensus 17 ~~~~~~~~~tl-~~~l~~~a~~~p~~~a~~~~~----~~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~ 91 (415)
+.|.....+|+ .++|.++++.+|+++|+++.. ..+.+||+||.++++++|+.|+++|+++||+|+++++|+.+++
T Consensus 44 ~~wf~~~~~n~~~~~l~~~~~~~p~~~A~~~~~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~ 123 (629)
T PRK10524 44 ARWFVGGRTNLCHNAVDRHLAKRPEQLALIAVSTETDEERTYTFRQLHDEVNRMAAMLRSLGVQRGDRVLIYMPMIAEAA 123 (629)
T ss_pred CccCCCcEeeHHHHHHHHhhccCCCCeEEEEEcCCCCceEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHH
Confidence 45555556776 455667778899999998631 2478999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCeEeecCCCCCHHHHHHHHHhcCceEEEEcccc---------hHHHHhhhhh---cCceEEEeCCCC---
Q 014952 92 FAFLGASYIGATSTTANPFYTPPEIAKQAIASKAKIIITQAVY---------NDKVRDLSEH---HGARIVTIDPPP--- 156 (415)
Q Consensus 92 ~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~vl~~~~~---------~~~~~~~~~~---~~~~~i~~~~~~--- 156 (415)
++++||+++|++++|+++.++.+++..++++++++++|+++.. .+.+...... ....++.++...
T Consensus 124 ~~~lA~~~~Gav~v~~~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~ 203 (629)
T PRK10524 124 FAMLACARIGAIHSVVFGGFASHSLAARIDDAKPVLIVSADAGSRGGKVVPYKPLLDEAIALAQHKPRHVLLVDRGLAPM 203 (629)
T ss_pred HHHHHHHHhCcEEEeeCCCCCHHHHHHHHHhcCCcEEEEccCcccCCcccccHHHHHHHHHhcCCCCCEEEEEeCCCCCc
Confidence 9999999999999999999999999999999999999987642 2233332221 123455554211
Q ss_pred ----CCccchhhhhhhcccCCCCcccCCCCCeEEEecCCCCCCCCceeeechHHHHHHHhhhhcCCCCCccCCCCcEEEE
Q 014952 157 ----ENCLHFSELITQADENEIPAVKINPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILC 232 (415)
Q Consensus 157 ----~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (415)
.....++++.........+.....++++++|+|||||||.||+|.++|.++.......... .+++.+++++++
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~il~TSGTTG~PKgV~~~~~~~~~~~~~~~~~---~~~~~~~d~~~~ 280 (629)
T PRK10524 204 ARVAGRDVDYATLRAQHLGARVPVEWLESNEPSYILYTSGTTGKPKGVQRDTGGYAVALATSMDT---IFGGKAGETFFC 280 (629)
T ss_pred CcccCCcccHHHHHhcCCCCCCCceeeCCCCceEEEeecCCCCCCceEEECCcHHHHHHHHHHHH---hcCCCCCCEEEE
Confidence 1122344442221112223334567899999999999999999999999876544332221 335778899999
Q ss_pred ccchHHHHhhHHHHHHHHHcCcEEEEcC----CCCHHHHHHHHHhcCceeeecchHHHHHHHcCCC--CCCCCcccceee
Q 014952 233 VLPLFHIYSLNSVLLCALRVGAAILIMQ----KFDIVKLMELVQKYKVTVAPFVPPIVLAVAKSGD--VDKYDMSSIRTV 306 (415)
Q Consensus 233 ~~pl~~~~g~~~~~l~~l~~G~~~v~~~----~~~~~~~~~~l~~~~~t~l~~~p~~l~~l~~~~~--~~~~~l~~lr~v 306 (415)
..|++|..+....++.++..|+++++.+ ..++..+++.++++++|++.++|.+++.|.+... ....++++||.+
T Consensus 281 ~~~~~~~~~~~~~~~~~l~~G~~~v~~~g~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~l~~lr~i 360 (629)
T PRK10524 281 ASDIGWVVGHSYIVYAPLLAGMATIMYEGLPTRPDAGIWWRIVEKYKVNRMFSAPTAIRVLKKQDPALLRKHDLSSLRAL 360 (629)
T ss_pred cCCCCeeccchHHHHHHHhCCCEEEEECCCCCCCChHHHHHHHHHcCceEEEeCHHHHHHHHhcCcccccccChhheeEE
Confidence 9999999887667889999999999875 3578999999999999999999999998877543 234568999999
Q ss_pred eecCCCCCHHHHHHHHhhCCCCccccccccccCCccccccccccCCccccCCCcccccccCCeEEEEeCCCCCCCCCCCc
Q 014952 307 MSGAAPMGKELEDAVRAKLPHAKLGQGYGMTEAGPVLSMCLAFAKEPFEIKSGACGTVVRNAEMKIVDPDTGISLPRNQA 386 (415)
Q Consensus 307 ~~gG~~l~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~G~p~~~~~v~i~d~~~~~~~~~g~~ 386 (415)
++||+++++++.+++.+.+ +.++++.||+||+++.+..... .......+.+++|+|+++++++|+|+++|++++.|+.
T Consensus 361 ~~~Ge~l~~~~~~~~~~~~-~~~v~~~YG~TE~~~~~~~~~~-~~~~~~~~~~~~G~p~~g~~~~i~d~~~g~~~~~g~~ 438 (629)
T PRK10524 361 FLAGEPLDEPTASWISEAL-GVPVIDNYWQTETGWPILAIAR-GVEDRPTRLGSPGVPMYGYNVKLLNEVTGEPCGPNEK 438 (629)
T ss_pred EEeCCCCCHHHHHHHHHhc-CCCeEeccccccccchhhcCCC-CcccCcCCCCCcccCcCCceEEEEeCCCCCCCCCCCc
Confidence 9999999999999999999 7899999999999853322211 0011234567899999999999999757999999999
Q ss_pred eeEEEecC---ccccccccCCcceeeeee
Q 014952 387 GEICIRGA---QIMKGTYHIYAPFLLSIV 412 (415)
Q Consensus 387 Gel~v~~~---~~~~gY~~~~~~~~~~~~ 412 (415)
|||+++|| .++.|||++++.+...|+
T Consensus 439 Gel~i~gp~~~~~~~~~~~~~~~~~~~~~ 467 (629)
T PRK10524 439 GVLVIEGPLPPGCMQTVWGDDDRFVKTYW 467 (629)
T ss_pred EEEEEcCCCChhhcCCccCChHHHHHhhh
Confidence 99999998 578999999998877654
No 36
>PRK08316 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.3e-49 Score=391.99 Aligned_cols=378 Identities=26% Similarity=0.385 Sum_probs=319.0
Q ss_pred CCCCHHhHHHhhhccCCCCcEEEeCCCCCeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHHhCC
Q 014952 23 NHLPLHTYCFENISQFADRPCIINGPTGDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGA 102 (415)
Q Consensus 23 ~~~tl~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~ 102 (415)
+..|+.++|..+++++|+++|+++. ++.+||+||.+++.++|+.|.+.|+++||+|+++++|+.+++++++||+++|+
T Consensus 9 ~~~~l~~~l~~~a~~~~~~~a~~~~--~~~~Ty~~l~~~~~~~a~~L~~~gi~~~~~V~l~~~~~~~~~~~~~a~~~~G~ 86 (523)
T PRK08316 9 RRQTIGDILRRSARRYPDKTALVFG--DRSWTYAELDAAVNRVAAALLDLGLKKGDRVAALGHNSDAYALLWLACARAGA 86 (523)
T ss_pred cCCCHHHHHHHHHHHCCCCeEEEEC--CceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHhcCc
Confidence 3578999999999999999999987 79999999999999999999999999999999999999999999999999999
Q ss_pred eEeecCCCCCHHHHHHHHHhcCceEEEEcccchHHHHhhhhhcCceEEEeC------CCCCCccchhhhhhhcccCCCCc
Q 014952 103 TSTTANPFYTPPEIAKQAIASKAKIIITQAVYNDKVRDLSEHHGARIVTID------PPPENCLHFSELITQADENEIPA 176 (415)
Q Consensus 103 ~~v~l~~~~~~~~~~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~i~~~------~~~~~~~~~~~l~~~~~~~~~~~ 176 (415)
+++|+++..+.+++..+++.+++++++++.+..+.+...........+... ........++++ ..........
T Consensus 87 ~~v~l~~~~~~~~i~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 165 (523)
T PRK08316 87 VHVPVNFMLTGEELAYILDHSGARAFLVDPALAPTAEAALALLPVDTLILSLVLGGREAPGGWLDFADW-AEAGSVAEPD 165 (523)
T ss_pred EEEecccccCHHHHHHHHHhCCCCEEEEccchHHHHHHHhhhcCccceeeeecccccccccchhhHHHH-HhcCCCccCc
Confidence 999999999999999999999999999998887766654332221111111 112223444444 2222222233
Q ss_pred ccCCCCCeEEEecCCCCCCCCceeeechHHHHHHHhhhhcCCCCCccCCCCcEEEEccchHHHHhhHHHHHHHHHcCcEE
Q 014952 177 VKINPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAI 256 (415)
Q Consensus 177 ~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~l~~l~~G~~~ 256 (415)
.....+++++|+|||||||.||+|.++|+++......... .+.+.++++++..+|++|..++...++.++..|+++
T Consensus 166 ~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~----~~~~~~~~~~~~~~p~~h~~g~~~~~~~~~~~G~~~ 241 (523)
T PRK08316 166 VELADDDLAQILYTSGTESLPKGAMLTHRALIAEYVSCIV----AGDMSADDIPLHALPLYHCAQLDVFLGPYLYVGATN 241 (523)
T ss_pred cCCCCCCeEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHH----HhCCCCCceEEEccCCchhhhHHHHHHHHHhcCceE
Confidence 4566789999999999999999999999999988776665 445788999999999999999876667789999999
Q ss_pred EEcCCCCHHHHHHHHHhcCceeeecchHHHHHHHcCCCCCCCCcccceeeeecCCCCCHHHHHHHHhhCCCCcccccccc
Q 014952 257 LIMQKFDIVKLMELVQKYKVTVAPFVPPIVLAVAKSGDVDKYDMSSIRTVMSGAAPMGKELEDAVRAKLPHAKLGQGYGM 336 (415)
Q Consensus 257 v~~~~~~~~~~~~~l~~~~~t~l~~~p~~l~~l~~~~~~~~~~l~~lr~v~~gG~~l~~~~~~~~~~~~~~~~~~~~YG~ 336 (415)
++.+..++..+++.++++++|++.++|.++..+.+.......+++++|.+++||+.++.++.+.+++.+++.++++.||+
T Consensus 242 ~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~l~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~YG~ 321 (523)
T PRK08316 242 VILDAPDPELILRTIEAERITSFFAPPTVWISLLRHPDFDTRDLSSLRKGYYGASIMPVEVLKELRERLPGLRFYNCYGQ 321 (523)
T ss_pred EEecCCCHHHHHHHHHHhCCeEEEeCHHHHHHHHcCcccccCCcccceEEEEcCCcCCHHHHHHHHHHcCCCceeeeecc
Confidence 99988899999999999999999999999999998876667788999999999999999999999999988999999999
Q ss_pred ccCCccccccccccCCccccCCCcccccccCCeEEEEeCCCCCCCCCCCceeEEEecCccccccccCCcceeeee
Q 014952 337 TEAGPVLSMCLAFAKEPFEIKSGACGTVVRNAEMKIVDPDTGISLPRNQAGEICIRGAQIMKGTYHIYAPFLLSI 411 (415)
Q Consensus 337 tE~~~~~~~~~~~~~~~~~~~~~~~G~p~~~~~v~i~d~~~~~~~~~g~~Gel~v~~~~~~~gY~~~~~~~~~~~ 411 (415)
||++.+...+. ........+++|+|+++++++|+| +++++++.|+.|||+++|+.++.||+++++.+...|
T Consensus 322 tE~~~~~~~~~---~~~~~~~~~~~G~~~~~~~~~i~~-~~~~~~~~g~~Gei~v~~~~~~~~y~~~~~~~~~~~ 392 (523)
T PRK08316 322 TEIAPLATVLG---PEEHLRRPGSAGRPVLNVETRVVD-DDGNDVAPGEVGEIVHRSPQLMLGYWDDPEKTAEAF 392 (523)
T ss_pred cccCccccccC---ccccccccCCcccCCCCcEEEEEc-CCCCCCCCCCcceEEEECCchhhhhcCCHHHHHHHh
Confidence 99997655431 112234567899999999999999 558999999999999999999999999988765543
No 37
>PLN02430 long-chain-fatty-acid-CoA ligase
Probab=100.00 E-value=6.9e-50 Score=400.90 Aligned_cols=383 Identities=22% Similarity=0.283 Sum_probs=295.6
Q ss_pred CCCCCHHhHHHhhhccCCCCcEEEeCC--CC-----CeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHH
Q 014952 22 PNHLPLHTYCFENISQFADRPCIINGP--TG-----DVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAF 94 (415)
Q Consensus 22 ~~~~tl~~~l~~~a~~~p~~~a~~~~~--~~-----~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~ 94 (415)
|+..|+.+.|.+.++++|+++|+.... .+ ..+||+|+.++++++|++|.++|+++||+|+|+++|+++|+++.
T Consensus 39 ~~~~t~~~~~~~~~~~~p~~~al~~~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~ew~~~~ 118 (660)
T PLN02430 39 SDITTAWDIFSKSVEKYPDNKMLGWRRIVDGKVGPYMWKTYKEVYEEVLQIGSALRASGAEPGSRVGIYGSNCPQWIVAM 118 (660)
T ss_pred CCCCCHHHHHHHHHHhCCCCceEEEEecCCCCCCCcEEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHH
Confidence 566899999999999999999997431 11 24799999999999999999999999999999999999999999
Q ss_pred HHHHHhCCeEeecCCCCCHHHHHHHHHhcCceEEEEcccch-HHHHhhhhh-cCc-eEEEeCCCCC-----------Ccc
Q 014952 95 LGASYIGATSTTANPFYTPPEIAKQAIASKAKIIITQAVYN-DKVRDLSEH-HGA-RIVTIDPPPE-----------NCL 160 (415)
Q Consensus 95 lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~vl~~~~~~-~~~~~~~~~-~~~-~~i~~~~~~~-----------~~~ 160 (415)
+||+++|++++|+++.++.+++.++++++++++++++.... ..+...... ..+ .+|.++.... ...
T Consensus 119 lA~~~~G~v~vpl~~~~~~~~l~~il~~~~~~~v~~~~~~~~~~~~~~~~~~~~l~~ii~~~~~~~~~~~~~~~~~~~~~ 198 (660)
T PLN02430 119 EACAAHSLICVPLYDTLGPGAVDYIVDHAEIDFVFVQDKKIKELLEPDCKSAKRLKAIVSFTSVTEEESDKASQIGVKTY 198 (660)
T ss_pred HHHHHcCCeEEEeccCCCHHHHHHHHhccCCCEEEECHHHHHHHHhhhcccCCCceEEEEECCCChHHhhhhhcCCcEEE
Confidence 99999999999999999999999999999999999987533 233222111 122 3555543211 123
Q ss_pred chhhhhhhcccCCCCcccCCCCCeEEEecCCCCCCCCceeeechHHHHHHHhhhhcCCCC-CccCCCCcEEEEccchHHH
Q 014952 161 HFSELITQADENEIPAVKINPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENP-NLYLHKEDVILCVLPLFHI 239 (415)
Q Consensus 161 ~~~~l~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~pl~~~ 239 (415)
++++++..............++++++|+|||||||.||||++||+++...+......... ...+.++|++++++|++|.
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~d~a~iiyTSGTTG~PKGV~lth~~~~~~~~~~~~~~~~~~~~~~~~d~~ls~lPl~H~ 278 (660)
T PLN02430 199 SWIDFLHMGKENPSETNPPKPLDICTIMYTSGTSGDPKGVVLTHEAVATFVRGVDLFMEQFEDKMTHDDVYLSFLPLAHI 278 (660)
T ss_pred EHHHHHHhhccCCCCCCCcCcCceEEEEECCCCCCCCCEEEeecHHHHHHHHHHHhhccccccCCCCCCEEEEeCcHHHH
Confidence 566653332222222233467899999999999999999999999998877654321110 1145788999999999999
Q ss_pred HhhHHHHHHHHHcCcEEEEcCCCCHHHHHHHHHhcCceeeecchHHHHHHHcCCC-------------------------
Q 014952 240 YSLNSVLLCALRVGAAILIMQKFDIVKLMELVQKYKVTVAPFVPPIVLAVAKSGD------------------------- 294 (415)
Q Consensus 240 ~g~~~~~l~~l~~G~~~v~~~~~~~~~~~~~l~~~~~t~l~~~p~~l~~l~~~~~------------------------- 294 (415)
++... .+.++..|+++++... ++..+.+.+++++||++.++|.++..+.+...
T Consensus 279 ~~~~~-~~~~l~~G~~i~~~~~-~~~~l~~~l~~~~pt~~~~vP~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (660)
T PLN02430 279 LDRMI-EEYFFRKGASVGYYHG-DLNALRDDLMELKPTLLAGVPRVFERIHEGIQKALQELNPRRRLIFNALYKYKLAWM 356 (660)
T ss_pred HHHHH-HHHHHHcCCEEEEeCC-ChhhHHHHHHHhCCcEEEecHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHH
Confidence 99874 4567889999987654 78899999999999999999999987764200
Q ss_pred ------CCCC---C-----------cccceeeeecCCCCCHHHHHHHHhhCCCCccccccccccCCccccccccccCCcc
Q 014952 295 ------VDKY---D-----------MSSIRTVMSGAAPMGKELEDAVRAKLPHAKLGQGYGMTEAGPVLSMCLAFAKEPF 354 (415)
Q Consensus 295 ------~~~~---~-----------l~~lr~v~~gG~~l~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~ 354 (415)
.... + .+++|.+++||+++++++.+.++. ++++.+++.||+||+++.++... ...
T Consensus 357 ~~~~~~~~~~~~~d~l~~~~i~~~~G~~lr~~~~gga~l~~~~~~~~~~-~~~~~i~~~YG~TE~~~~~~~~~----~~~ 431 (660)
T PLN02430 357 NRGYSHKKASPMADFLAFRKVKAKLGGRLRLLISGGAPLSTEIEEFLRV-TSCAFVVQGYGLTETLGPTTLGF----PDE 431 (660)
T ss_pred hcCCCCCCcchhHHHHHHHHHHHHhCCeEEEEEECCCCCCHHHHHHHHH-hcCCCeeeecchhhhhhceEeec----ccc
Confidence 0000 0 158999999999999998766654 43578999999999987655431 112
Q ss_pred ccCCCcccccccCCeEEEEe-CCCC-CCCCCCCceeEEEecCccccccccCCcceeeee
Q 014952 355 EIKSGACGTVVRNAEMKIVD-PDTG-ISLPRNQAGEICIRGAQIMKGTYHIYAPFLLSI 411 (415)
Q Consensus 355 ~~~~~~~G~p~~~~~v~i~d-~~~~-~~~~~g~~Gel~v~~~~~~~gY~~~~~~~~~~~ 411 (415)
...++++|+|+|+++++++| ++++ .+++.+..|||+|+||+++.|||++|+++..+|
T Consensus 432 ~~~~gsvG~p~~~~evki~d~~~~g~~~~~~~~~GEi~vrg~~v~~GY~~~~e~t~~~~ 490 (660)
T PLN02430 432 MCMLGTVGAPAVYNELRLEEVPEMGYDPLGEPPRGEICVRGKCLFSGYYKNPELTEEVM 490 (660)
T ss_pred CCCCCCccCCCCceEEEEEEcCCcCcccCCCCCcceEEecCCCccccccCChHHhhhhh
Confidence 23468999999999999987 3333 556677789999999999999999999988765
No 38
>PRK08315 AMP-binding domain protein; Validated
Probab=100.00 E-value=1.6e-49 Score=394.17 Aligned_cols=382 Identities=27% Similarity=0.453 Sum_probs=314.8
Q ss_pred CCCHHhHHHhhhccCCCCcEEEeCCCCCeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHHhCCe
Q 014952 24 HLPLHTYCFENISQFADRPCIINGPTGDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGAT 103 (415)
Q Consensus 24 ~~tl~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~ 103 (415)
+.|+.+.|.+.++++|+++|+++.+.++.+||+||.++++++|+.|.+.|+++||+|+++++|+.++++++|||+++|++
T Consensus 15 ~~~l~~~l~~~~~~~~~~~ai~~~~~~~~~Ty~~l~~~~~~~a~~L~~~gi~~g~~V~i~~~~~~~~~~~~la~~~~G~~ 94 (559)
T PRK08315 15 EQTIGQLLDRTAARYPDREALVYRDQGLRWTYREFNEEVDALAKGLLALGIEKGDRVGIWAPNVPEWVLTQFATAKIGAI 94 (559)
T ss_pred hccHHHHHHHHHHHCCCCeEEEEcCCCeEEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHHHHHHHHHHHhCeE
Confidence 57999999999999999999998766789999999999999999999999999999999999999999999999999999
Q ss_pred EeecCCCCCHHHHHHHHHhcCceEEEEcccch-----HHHHhhhhhc---------------CceEEEeCCC-CCCccch
Q 014952 104 STTANPFYTPPEIAKQAIASKAKIIITQAVYN-----DKVRDLSEHH---------------GARIVTIDPP-PENCLHF 162 (415)
Q Consensus 104 ~v~l~~~~~~~~~~~~l~~~~~~~vl~~~~~~-----~~~~~~~~~~---------------~~~~i~~~~~-~~~~~~~ 162 (415)
++|++|..+.+++..+++.+++++++++.+.. +.+.+..... ...++..+.. ......+
T Consensus 95 ~v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (559)
T PRK08315 95 LVTINPAYRLSELEYALNQSGCKALIAADGFKDSDYVAMLYELAPELATCEPGQLQSARLPELRRVIFLGDEKHPGMLNF 174 (559)
T ss_pred EEecCccCCHHHHHHHHHhcCCCEEEEeccccccchHHHHHHhhhhhhcccccccccccCCCceeEEeecccCCcccccH
Confidence 99999999999999999999999999987542 1122211110 0123333321 1222344
Q ss_pred hhhhhhccc---C--CCCcccCCCCCeEEEecCCCCCCCCceeeechHHHHHHHhhhhcCCCCCccCCCCcEEEEccchH
Q 014952 163 SELITQADE---N--EIPAVKINPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLF 237 (415)
Q Consensus 163 ~~l~~~~~~---~--~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~ 237 (415)
+++...... . ........++++++++|||||||.||+|.++|.++..+...... .+.+.++++++...|++
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~----~~~~~~~d~~~~~~p~~ 250 (559)
T PRK08315 175 DELLALGRAVDDAELAARQATLDPDDPINIQYTSGTTGFPKGATLTHRNILNNGYFIGE----AMKLTEEDRLCIPVPLY 250 (559)
T ss_pred HHHHhhccccccccccchhccCCCCCcEEEEEcCCCCCCcceEEeeHHHHHHHHHHHHH----hcCCCCCceEEEecCcH
Confidence 444221100 0 11122345788999999999999999999999999988877766 44678899999999999
Q ss_pred HHHhhHHHHHHHHHcCcEEEEc-CCCCHHHHHHHHHhcCceeeecchHHHHHHHcCCCCCCCCcccceeeeecCCCCCHH
Q 014952 238 HIYSLNSVLLCALRVGAAILIM-QKFDIVKLMELVQKYKVTVAPFVPPIVLAVAKSGDVDKYDMSSIRTVMSGAAPMGKE 316 (415)
Q Consensus 238 ~~~g~~~~~l~~l~~G~~~v~~-~~~~~~~~~~~l~~~~~t~l~~~p~~l~~l~~~~~~~~~~l~~lr~v~~gG~~l~~~ 316 (415)
|..++...++.++..|+++++. ..+++..+++.++++++|+++++|.++..++.........++++|.+++||++++.+
T Consensus 251 ~~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~l~~~~~t~~~~~P~~~~~~~~~~~~~~~~~~~lr~~~~~G~~~~~~ 330 (559)
T PRK08315 251 HCFGMVLGNLACVTHGATMVYPGEGFDPLATLAAVEEERCTALYGVPTMFIAELDHPDFARFDLSSLRTGIMAGSPCPIE 330 (559)
T ss_pred HHHHHHHHHHHHHhccceEEEecCCCCHHHHHHHHHHcCCeEEecchHHHHHHHhCcccCCCCchhhheeEecCCCCCHH
Confidence 9999887789999999999854 468999999999999999999999999998887766667789999999999999999
Q ss_pred HHHHHHhhCCCCccccccccccCCccccccccccCCccccCCCcccccccCCeEEEEeCCCCCCCCCCCceeEEEecCcc
Q 014952 317 LEDAVRAKLPHAKLGQGYGMTEAGPVLSMCLAFAKEPFEIKSGACGTVVRNAEMKIVDPDTGISLPRNQAGEICIRGAQI 396 (415)
Q Consensus 317 ~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~G~p~~~~~v~i~d~~~~~~~~~g~~Gel~v~~~~~ 396 (415)
+.+++.+.++..++++.||+||++.+.+.+.. ......+..++|+|+|+++++|+|++++++++.|+.|||+|+|+.+
T Consensus 331 ~~~~~~~~~~~~~l~~~YG~tE~~~~~~~~~~--~~~~~~~~~~vG~p~~~~~v~i~d~~~~~~~~~g~~GEl~v~g~~~ 408 (559)
T PRK08315 331 VMKRVIDKMHMSEVTIAYGMTETSPVSTQTRT--DDPLEKRVTTVGRALPHLEVKIVDPETGETVPRGEQGELCTRGYSV 408 (559)
T ss_pred HHHHHHHHcCCcceeEEEcccccccceeecCc--ccchhhccCCCCccCCCcEEEEEcCccCCcCCCCCceEEEEECchh
Confidence 99999999966679999999999865443321 1122345689999999999999998879999999999999999999
Q ss_pred ccccccCCcceeeee
Q 014952 397 MKGTYHIYAPFLLSI 411 (415)
Q Consensus 397 ~~gY~~~~~~~~~~~ 411 (415)
+.|||++|+.+...|
T Consensus 409 ~~gy~~~~~~~~~~~ 423 (559)
T PRK08315 409 MKGYWNDPEKTAEAI 423 (559)
T ss_pred hhhhcCChhHHhhcC
Confidence 999999998877655
No 39
>PRK06187 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=1.6e-49 Score=391.16 Aligned_cols=380 Identities=28% Similarity=0.403 Sum_probs=322.9
Q ss_pred CCCCCHHhHHHhhhccCCCCcEEEeCCCCCeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHHhC
Q 014952 22 PNHLPLHTYCFENISQFADRPCIINGPTGDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIG 101 (415)
Q Consensus 22 ~~~~tl~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G 101 (415)
+.+.|+.+.|.+.++.+|+++|+.+. ++.+||+||.+.++++|+.|.+.|+++|++|+++++|+.+++++++||+++|
T Consensus 3 ~~~~~l~~~l~~~~~~~p~~~a~~~~--~~~~Ty~~l~~~~~~~a~~L~~~g~~~~~~V~l~~~~~~~~~~~~la~~~~G 80 (521)
T PRK06187 3 DYPLTIGRILRHGARKHPDKEAVYFD--GRRTTYAELDERVNRLANALRALGVKKGDRVAVFDWNSHEYLEAYFAVPKIG 80 (521)
T ss_pred cccCCHHHHHHHHHHHCCCceEEEeC--CceEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHcC
Confidence 45689999999999999999999997 7779999999999999999999999999999999999999999999999999
Q ss_pred CeEeecCCCCCHHHHHHHHHhcCceEEEEcccchHHHHhhhhhcC-c-eEEEeCCCC-----CCccchhhhhhhcccCCC
Q 014952 102 ATSTTANPFYTPPEIAKQAIASKAKIIITQAVYNDKVRDLSEHHG-A-RIVTIDPPP-----ENCLHFSELITQADENEI 174 (415)
Q Consensus 102 ~~~v~l~~~~~~~~~~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~-~-~~i~~~~~~-----~~~~~~~~l~~~~~~~~~ 174 (415)
++++++++.++.+++..+++.+++++++++.+..+.+.+...... . +++.+++.. .....+++++ .......
T Consensus 81 ~~~v~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 159 (521)
T PRK06187 81 AVLHPINIRLKPEEIAYILNDAEDRVVLVDSEFVPLLAAILPQLPTVRTVIVEGDGPAAPLAPEVGEYEELL-AAASDTF 159 (521)
T ss_pred eEEEecccCCCHHHHHHHHHhcCCeEEEEcchHHHHHHHHhhccCCccEEEEecCccccccccccccHHHHh-hcCCccC
Confidence 999999999999999999999999999999988877776654433 2 444444332 3345555552 2222233
Q ss_pred CcccCCCCCeEEEecCCCCCCCCceeeechHHHHHHHhhhhcCCCCCccCCCCcEEEEccchHHHHhhHHHHHHHHHcCc
Q 014952 175 PAVKINPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGA 254 (415)
Q Consensus 175 ~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~l~~l~~G~ 254 (415)
+......++.++++|||||||.||++.++|.++......... .+.+.++++++..+|++|..++.. .+.++..|+
T Consensus 160 ~~~~~~~~~~~~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~----~~~~~~~d~~~~~~~~~~~~~~~~-~~~~l~~G~ 234 (521)
T PRK06187 160 DFPDIDENDAAAMLYTSGTTGHPKGVVLSHRNLFLHSLAVCA----WLKLSRDDVYLVIVPMFHVHAWGL-PYLALMAGA 234 (521)
T ss_pred CCCCCCccceEEEEECCCCCCCCceEEeehHHHHHHHHHHHH----hhCCCCCCEEEEeCCchHHhhHHH-HHHHHHhCC
Confidence 344566789999999999999999999999999987777666 556889999999999999999875 455999999
Q ss_pred EEEEcCCCCHHHHHHHHHhcCceeeecchHHHHHHHcCCCCCCCCcccceeeeecCCCCCHHHHHHHHhhCCCCcccccc
Q 014952 255 AILIMQKFDIVKLMELVQKYKVTVAPFVPPIVLAVAKSGDVDKYDMSSIRTVMSGAAPMGKELEDAVRAKLPHAKLGQGY 334 (415)
Q Consensus 255 ~~v~~~~~~~~~~~~~l~~~~~t~l~~~p~~l~~l~~~~~~~~~~l~~lr~v~~gG~~l~~~~~~~~~~~~~~~~~~~~Y 334 (415)
++++.+.+++..+++.++++++|+++++|+++..|.+........++++|.+++||++++.++.+.+.+.| ++++++.|
T Consensus 235 ~~v~~~~~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~l~~v~~~Ge~l~~~~~~~~~~~~-~~~v~~~Y 313 (521)
T PRK06187 235 KQVIPRRFDPENLLDLIETERVTFFFAVPTIWQMLLKAPRAYFVDFSSLRLVIYGGAALPPALLREFKEKF-GIDLVQGY 313 (521)
T ss_pred EEEecCCCCHHHHHHHHHHhCCeEEEchHHHHHHHHcCcCCCccCcchhhEEEEcCcCCCHHHHHHHHHHh-Ccchheee
Confidence 99999888999999999999999999999999999988776677889999999999999999999999999 89999999
Q ss_pred ccccCCccccccccccCC-ccccCCCcccccccCCeEEEEeCCCCCCCCC--CCceeEEEecCccccccccCCcceeeee
Q 014952 335 GMTEAGPVLSMCLAFAKE-PFEIKSGACGTVVRNAEMKIVDPDTGISLPR--NQAGEICIRGAQIMKGTYHIYAPFLLSI 411 (415)
Q Consensus 335 G~tE~~~~~~~~~~~~~~-~~~~~~~~~G~p~~~~~v~i~d~~~~~~~~~--g~~Gel~v~~~~~~~gY~~~~~~~~~~~ 411 (415)
|+||++++...+...... .......++|+|+++++++|+|++ +++++. |+.|||+++|+.++.||+++++.+...|
T Consensus 314 G~tE~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~~~~-~~~~~~~~g~~Gel~v~~~~~~~~y~~~~~~~~~~~ 392 (521)
T PRK06187 314 GMTETSPVVSVLPPEDQLPGQWTKRRSAGRPLPGVEARIVDDD-GDELPPDGGEVGEIIVRGPWLMQGYWNRPEATAETI 392 (521)
T ss_pred ccCccCcccccCCcccccccccccCCccccccCCeEEEEECCC-CCCCCCCCCCeeEEEEECcchhhhhcCCHHHHHHHh
Confidence 999998765544110000 001256789999999999999955 788988 9999999999999999999987665544
No 40
>TIGR02275 DHB_AMP_lig 2,3-dihydroxybenzoate-AMP ligase. Proteins in this family belong to the AMP-binding enzyme family (pfam00501). Members activate 2,3-dihydroxybenzoate (DHB) by ligation of AMP from ATP with the release of pyrophosphate; many are involved in synthesis of siderophores such as enterobactin, vibriobactin, vulnibactin, etc. The most closely related proteine believed to differ in function activates salicylate rather than DHB.
Probab=100.00 E-value=2e-49 Score=390.43 Aligned_cols=380 Identities=23% Similarity=0.336 Sum_probs=308.7
Q ss_pred CCCCCCCCHHhHHHhhhccCCCCcEEEeCCCCCeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHH
Q 014952 19 IYIPNHLPLHTYCFENISQFADRPCIINGPTGDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGAS 98 (415)
Q Consensus 19 ~~~~~~~tl~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~ 98 (415)
....+..|+.+++.++++.+|+++|+++. ++.+||+||.++++++|..|.++|+++|++|+++++|+.+++++++||+
T Consensus 17 ~~~~~~~~l~~~~~~~a~~~p~~~a~~~~--~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~la~~ 94 (527)
T TIGR02275 17 KGYWQDKPLTDILRDQAARYPDAIAIICG--NRQWSYRELDQRADNLAAGLTKLGIGQGDTAVVQLPNIAEFYIVFFALL 94 (527)
T ss_pred cCcccCCcHHHHHHHHHHHCCCceEEEeC--CceecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHHHHHHHHH
Confidence 33444678999999999999999999987 7899999999999999999999999999999999999999999999999
Q ss_pred HhCCeEeecCCCCCHHHHHHHHHhcCceEEEEcccchH-----HHHhhhhhc-CceEEEeCCCCCCccchhhhhhhcccC
Q 014952 99 YIGATSTTANPFYTPPEIAKQAIASKAKIIITQAVYND-----KVRDLSEHH-GARIVTIDPPPENCLHFSELITQADEN 172 (415)
Q Consensus 99 ~~G~~~v~l~~~~~~~~~~~~l~~~~~~~vl~~~~~~~-----~~~~~~~~~-~~~~i~~~~~~~~~~~~~~l~~~~~~~ 172 (415)
++|++++++++....+++..+++.+++++++++..... ......... ..+.+.+............. ......
T Consensus 95 ~~G~~~v~~~~~~~~~~~~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 173 (527)
T TIGR02275 95 KLGIAPVLALFSHRKSELTAYAQQIEPALYIIDRAHSLFDYDAFARQLQSKLPTLRNIIVAGQTRVEAELFLW-LESPAE 173 (527)
T ss_pred HcCeEEeccccccCHHHHHHHHHhcCCcEEEEcCcccccchHHHHHHHHhhCCcceEEEEecCCCCcchhhHH-hhCcCc
Confidence 99999999999999999999999999999999865421 112221111 22322222111111111111 111111
Q ss_pred CCCcccCCCCCeEEEecCCCCCCCCceeeechHHHHHHHhhhhcCCCCCccCCCCcEEEEccchHHHHhhHH-HHHHHHH
Q 014952 173 EIPAVKINPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNS-VLLCALR 251 (415)
Q Consensus 173 ~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~-~~l~~l~ 251 (415)
..+.....++++++|+|||||||.||+|.++|+++..++..... .+.++.++++++.+|++|.+++.. .++.++.
T Consensus 174 ~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~----~~~~~~~d~~l~~~P~~h~~~~~~~~~~~~l~ 249 (527)
T TIGR02275 174 PVKFPPTKSDEVAFFQLSGGSTGTPKLIPRTHNDYYYSVRRSVE----ICWLTQQTRYLCALPAAHNYPLSSPGALGVFY 249 (527)
T ss_pred cccCCCCCCCccEEEEeCCCCCCCCceeeeehHHHHHHHHHHHh----hcCCCcCCEEEECCChHhhhhhhHHHHHHHHh
Confidence 22233456789999999999999999999999999988877665 445788999999999999998764 3678899
Q ss_pred cCcEEEEcCCCCHHHHHHHHHhcCceeeecchHHHHHHHcCCCCCCCCcccceeeeecCCCCCHHHHHHHHhhCCCCccc
Q 014952 252 VGAAILIMQKFDIVKLMELVQKYKVTVAPFVPPIVLAVAKSGDVDKYDMSSIRTVMSGAAPMGKELEDAVRAKLPHAKLG 331 (415)
Q Consensus 252 ~G~~~v~~~~~~~~~~~~~l~~~~~t~l~~~p~~l~~l~~~~~~~~~~l~~lr~v~~gG~~l~~~~~~~~~~~~~~~~~~ 331 (415)
.|+++++.+.+++..+++.++++++|++.++|.++..+.+.......+++++|.+++||++++.++.+++.+.+ +.+++
T Consensus 250 ~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~lr~~~~gG~~l~~~~~~~~~~~~-g~~~~ 328 (527)
T TIGR02275 250 AGGCVVLAPDPSPTDCFPLIERHKVTVTALVPPAVALWMQAASKSRYDLSSLKLLQVGGAKFSEAAARRVPAVF-GCQLQ 328 (527)
T ss_pred cCCeEEECCCCCHHHHHHHHHHhCCeEEEecHHHHHHHHhCccccCCCccceEEEEEcCCCCCHHHHHHHHHHh-CCeEE
Confidence 99999998888999999999999999999999999999887666667789999999999999999999999999 89999
Q ss_pred cccccccCCccccccccccCCccccCCCcccccc-cCCeEEEEeCCCCCCCCCCCceeEEEecCccccccccCCcceeee
Q 014952 332 QGYGMTEAGPVLSMCLAFAKEPFEIKSGACGTVV-RNAEMKIVDPDTGISLPRNQAGEICIRGAQIMKGTYHIYAPFLLS 410 (415)
Q Consensus 332 ~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~G~p~-~~~~v~i~d~~~~~~~~~g~~Gel~v~~~~~~~gY~~~~~~~~~~ 410 (415)
+.||+||++.... . .........+++|+|+ ++..++|+| +++++++.|+.|||+++|+.++.|||++++.+...
T Consensus 329 ~~YG~tE~~~~~~-~---~~~~~~~~~~~~G~~~~~~~~v~i~d-~~g~~~~~g~~Gei~v~g~~~~~gY~~~~~~~~~~ 403 (527)
T TIGR02275 329 QVFGMAEGLVNYT-R---LDDPAEIIFTTQGRPMSPDDEVRVVD-DHGNPVAPGETGMLLTRGPYTFRGYYKAPEHNAAA 403 (527)
T ss_pred eeeccCccCcccc-C---CCCccccccccCCCCCCCCceEEEEC-CCCCCCCCCCceEEEecCCccchhhcCChhHhHhh
Confidence 9999999653221 1 1112233457899999 588999999 55899999999999999999999999999988766
Q ss_pred e
Q 014952 411 I 411 (415)
Q Consensus 411 ~ 411 (415)
|
T Consensus 404 ~ 404 (527)
T TIGR02275 404 F 404 (527)
T ss_pred c
Confidence 5
No 41
>PRK05857 acyl-CoA synthetase; Validated
Probab=100.00 E-value=8.7e-50 Score=393.69 Aligned_cols=380 Identities=17% Similarity=0.180 Sum_probs=294.7
Q ss_pred CCHHhHHHhhhccCCCCcEEEeCCCCCeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHHhCCeE
Q 014952 25 LPLHTYCFENISQFADRPCIINGPTGDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGATS 104 (415)
Q Consensus 25 ~tl~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~ 104 (415)
.|+.+.|.+.++++|+++|+++.+.++.+||+||.++++++|+.|.++|+++||+|+++++|+.++++++|||+++|+++
T Consensus 14 ~~~~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~e~~~~~lA~~~~G~v~ 93 (540)
T PRK05857 14 STVLDRVFEQARQQPEAIALRRCDGTSALRYRELVAEVGGLAADLRAQSVSRGSRVLVISDNGPETYLSVLACAKLGAIA 93 (540)
T ss_pred cchHHHHHHHHhhCCCcEEEeecCCCceeeHHHHHHHHHHHHHHHHHhCcCCCCEEEEEcCCCHHHHHHHHHHHHcCeEE
Confidence 68999999999999999999876446789999999999999999999999999999999999999999999999999999
Q ss_pred eecCCCCCHHHHHHHHHhcCceEEEEcccchHHHHhhhhh-cCceEEEeCCCCCCccchhhhhhhcccCCCCcccCCCCC
Q 014952 105 TTANPFYTPPEIAKQAIASKAKIIITQAVYNDKVRDLSEH-HGARIVTIDPPPENCLHFSELITQADENEIPAVKINPDD 183 (415)
Q Consensus 105 v~l~~~~~~~~~~~~l~~~~~~~vl~~~~~~~~~~~~~~~-~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 183 (415)
+|+++.++.+++.++++.++++.+++++............ ....++.++...........+ .. ..........+++
T Consensus 94 v~l~~~~~~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~ 170 (540)
T PRK05857 94 VMADGNLPIAAIERFCQITDPAAALVAPGSKMASSAVPEALHSIPVIAVDIAAVTRESEHSL-DA--ASLAGNADQGSED 170 (540)
T ss_pred EecCccCCHHHHHHHHHhcCCceEEEeccchhccccccccccccceeEeecccccccccccc-cc--cccccccCCCCCC
Confidence 9999999999999999999999999987654222111111 122334443211100000000 00 0011123346689
Q ss_pred eEEEecCCCCCCCCceeeechHHHHHHHhhhhcCCCCCccCCCCcEEEEccchHHHHhhHHHHHHHHHcCcEEEEcCCCC
Q 014952 184 VVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIMQKFD 263 (415)
Q Consensus 184 ~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~l~~l~~G~~~v~~~~~~ 263 (415)
+++++|||||||.||+|.++|+++.++...........+.+..+++.++.+|++|..+++. .+.++..|+++++ .+.+
T Consensus 171 ~a~i~~TSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~h~~~l~~-~~~~l~~G~~~v~-~~~~ 248 (540)
T PRK05857 171 PLAMIFTSGTTGEPKAVLLANRTFFAVPDILQKEGLNWVTWVVGETTYSPLPATHIGGLWW-ILTCLMHGGLCVT-GGEN 248 (540)
T ss_pred eEEEEeCCCCCCCCCeEEEechhhhhhhHHhhhccccccccccCceeeecCCccccchHHH-HHHHhhcceeEEe-cCCC
Confidence 9999999999999999999999998765433221111235667889999999999999874 6788999998876 4468
Q ss_pred HHHHHHHHHhcCceeeecchHHHHHHHcCCCCCCCCcccceeeeecCCCCCHHHHHHHHhhCCCCccccccccccCCccc
Q 014952 264 IVKLMELVQKYKVTVAPFVPPIVLAVAKSGDVDKYDMSSIRTVMSGAAPMGKELEDAVRAKLPHAKLGQGYGMTEAGPVL 343 (415)
Q Consensus 264 ~~~~~~~l~~~~~t~l~~~p~~l~~l~~~~~~~~~~l~~lr~v~~gG~~l~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~ 343 (415)
+..+++.++++++|+++++|.++..|.+.......+++++|.+++||++++....+ +.+.+ +.++++.||+||++...
T Consensus 249 ~~~~~~~i~~~~it~~~~~P~~~~~l~~~~~~~~~~~~~lr~~~~gG~~~~~~~~~-~~~~~-g~~i~~~YG~TE~~~~~ 326 (540)
T PRK05857 249 TTSLLEILTTNAVATTCLVPTLLSKLVSELKSANATVPSLRLVGYGGSRAIAADVR-FIEAT-GVRTAQVYGLSETGCTA 326 (540)
T ss_pred hhHHHHHHHhcCcceEEeChHHHHHHHhccccCCCcCccceEEEEcCccCCchhHH-HHHHh-CCeeecccCCCcCCcee
Confidence 89999999999999999999999999887665567789999999999999887775 44566 89999999999998543
Q ss_pred cccccccCCccccCCCcccccccCCeEEEEeCCCCCCC-----CCCCceeEEEecCccccccccCCcceeeee
Q 014952 344 SMCLAFAKEPFEIKSGACGTVVRNAEMKIVDPDTGISL-----PRNQAGEICIRGAQIMKGTYHIYAPFLLSI 411 (415)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~G~p~~~~~v~i~d~~~~~~~-----~~g~~Gel~v~~~~~~~gY~~~~~~~~~~~ 411 (415)
...............+++|+|++|++++|+|+++..++ +.|+.|||+|+||+++.|||++++.+...|
T Consensus 327 ~~~~~~~~~~~~~~~~~~G~~~~g~~v~i~d~~~~~~~~~~~~~~~~~Gel~v~g~~~~~GY~~~~~~t~~~~ 399 (540)
T PRK05857 327 LCLPTDDGSIVKIEAGAVGRPYPGVDVYLAATDGIGPTAPGAGPSASFGTLWIKSPANMLGYWNNPERTAEVL 399 (540)
T ss_pred eecccccccccccccCCcCcccCCcEEEEECccccCccccccCCCCCcceEEEeCcchhhhhhCCccchhhhc
Confidence 22211111111234678999999999999996544333 457899999999999999999999988766
No 42
>PRK12467 peptide synthase; Provisional
Probab=100.00 E-value=2.3e-50 Score=464.49 Aligned_cols=369 Identities=20% Similarity=0.302 Sum_probs=314.7
Q ss_pred CCCCCHHhHHHhhhccCCCCcEEEeCCCCCeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHHhC
Q 014952 22 PNHLPLHTYCFENISQFADRPCIINGPTGDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIG 101 (415)
Q Consensus 22 ~~~~tl~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G 101 (415)
+...+++++|.++++++|+++|+++. ++.+||+||.++++++|+.|+++|+++|++|+++++|+.++++++|||+++|
T Consensus 3092 ~~~~~~~~l~~~~a~~~p~~~Av~~~--~~~lTY~eL~~~a~~lA~~L~~~gv~~g~~V~l~~~~s~~~vv~~lavl~aG 3169 (3956)
T PRK12467 3092 PSERLVHQLIEAQVARTPEAPALVFG--DQQLSYAELNRRANRLAHRLIAIGVGPDVLVGVAVERSVEMIVALLAVLKAG 3169 (3956)
T ss_pred CccccHHHHHHHHHHhCCCcceEeeC--CcccCHHHHHHHHHHHHHHHHHcCCCCCCeEEEEeCCCHHHHHHHHHHHhhC
Confidence 44579999999999999999999997 8899999999999999999999999999999999999999999999999999
Q ss_pred CeEeecCCCCCHHHHHHHHHhcCceEEEEcccchHHHHhhhhhcCceEEEeCCCCCCccchhhhhhhcccCCCCcccCCC
Q 014952 102 ATSTTANPFYTPPEIAKQAIASKAKIIITQAVYNDKVRDLSEHHGARIVTIDPPPENCLHFSELITQADENEIPAVKINP 181 (415)
Q Consensus 102 ~~~v~l~~~~~~~~~~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 181 (415)
++++|++|.++.+++.++++++++++++++....+.+... .....+.++... ........+.....+
T Consensus 3170 a~~vpld~~~p~~rl~~il~~~~~~~vlt~~~~~~~~~~~---~~~~~~~~~~~~----------~~~~~~~~~~~~~~~ 3236 (3956)
T PRK12467 3170 GAYVPLDPEYPRERLAYMIEDSGVKLLLTQAHLLEQLPAP---AGDTALTLDRLD----------LNGYSENNPSTRVMG 3236 (3956)
T ss_pred cEeecCCCCChHHHHHHHHhCCCCcEEEechhhhhhcccc---cCCceeeecchh----------hcccCCCCCcccCCC
Confidence 9999999999999999999999999999987765443221 123334443211 111111223344678
Q ss_pred CCeEEEecCCCCCCCCceeeechHHHHHHHhhhhcCCCCCccCCCCcEEEEccchHHHHhhHHHHHHHHHcCcEEEEcCC
Q 014952 182 DDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIMQK 261 (415)
Q Consensus 182 ~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~l~~l~~G~~~v~~~~ 261 (415)
+++++|+|||||||.||||+++|+++.+.+.+... .+.++++++++...|++|..+.. .++.++..|+++++.+.
T Consensus 3237 ~~~a~ii~TSGSTG~PKgV~~~h~~l~~~~~~~~~----~~~~~~~d~~l~~~~~~fd~~~~-~~~~~L~~G~~l~i~~~ 3311 (3956)
T PRK12467 3237 ENLAYVIYTSGSTGKPKGVGVRHGALANHLCWIAE----AYELDANDRVLLFMSFSFDGAQE-RFLWTLICGGCLVVRDN 3311 (3956)
T ss_pred CceEEEEEccCCCCCcceeeehhHHHHHHHHHHHH----hcCCCcCCEEEEecCccHhHHHH-HHHHHHhCCCEEEECCc
Confidence 99999999999999999999999999999888777 55688999999999999998876 58999999999999875
Q ss_pred --CCHHHHHHHHHhcCceeeecchHHHHHHHcCCCCCCCCcccceeeeecCCCCCHHHHHHHHhhCCCCccccccccccC
Q 014952 262 --FDIVKLMELVQKYKVTVAPFVPPIVLAVAKSGDVDKYDMSSIRTVMSGAAPMGKELEDAVRAKLPHAKLGQGYGMTEA 339 (415)
Q Consensus 262 --~~~~~~~~~l~~~~~t~l~~~p~~l~~l~~~~~~~~~~l~~lr~v~~gG~~l~~~~~~~~~~~~~~~~~~~~YG~tE~ 339 (415)
+++..+++.++++++|++.++|+++..+++... ..++++||.+++||+++++++.+++.+.+++..+++.||+||+
T Consensus 3312 ~~~~~~~l~~~i~~~~vt~~~~~Ps~l~~l~~~~~--~~~~~~lr~~~~gGe~~~~~~~~~~~~~~~~~~l~n~YG~TE~ 3389 (3956)
T PRK12467 3312 DLWDPEELWQAIHAHRISIACFPPAYLQQFAEDAG--GADCASLDIYVFGGEAVPPAAFEQVKRKLKPRGLTNGYGPTEA 3389 (3956)
T ss_pred ccCCHHHHHHHHHHcCCEEEEcCHHHHHHHHhccc--ccCCCCceEEEEecCCCCHHHHHHHHHhCCCCEEEeCcccchh
Confidence 789999999999999999999999999987543 3467899999999999999999999999888899999999999
Q ss_pred CccccccccccCCccccCCCcccccccCCeEEEEeCCCCCCCCCCCceeEEEecCccccccccCCcceeeeeee
Q 014952 340 GPVLSMCLAFAKEPFEIKSGACGTVVRNAEMKIVDPDTGISLPRNQAGEICIRGAQIMKGTYHIYAPFLLSIVC 413 (415)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~G~p~~~~~v~i~d~~~~~~~~~g~~Gel~v~~~~~~~gY~~~~~~~~~~~~~ 413 (415)
+..++......+........++|+|++|++++|+| +++++++.|+.|||+|+|+.+++||+|+|+.|.++|+.
T Consensus 3390 ~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~v~d-~~~~~vp~G~~GEL~i~G~~v~~GY~~~~~~T~~~F~~ 3462 (3956)
T PRK12467 3390 VVTVTLWKCGGDAVCEAPYAPIGRPVAGRSIYVLD-GQLNPVPVGVAGELYIGGVGLARGYHQRPSLTAERFVA 3462 (3956)
T ss_pred EeeeEEEecccccccCCCCCCCccccCCCEEEEEC-CCCCCCCCCCCceEEEcchhhhhhccCCcccchhhccC
Confidence 86554432211111223346899999999999999 56999999999999999999999999999999999963
No 43
>PRK07514 malonyl-CoA synthase; Validated
Probab=100.00 E-value=5e-49 Score=386.00 Aligned_cols=372 Identities=25% Similarity=0.367 Sum_probs=313.6
Q ss_pred CCCHHhHHHhhhccCCCCcEEEeCCCCCeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHHhCCe
Q 014952 24 HLPLHTYCFENISQFADRPCIINGPTGDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGAT 103 (415)
Q Consensus 24 ~~tl~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~ 103 (415)
+-+|.+.+.+++ .+|+++++.+. +++.+||.||.++++++|+.|+++|+++||+|+++++|+.+++++++||+++|++
T Consensus 2 ~~~l~~~~~~~~-~~~~~~a~~~~-~~~~~Ty~eL~~~~~~la~~L~~~g~~~gd~v~i~~~~~~e~~v~~la~~~~G~~ 79 (504)
T PRK07514 2 NNNLFDALRAAF-ADRDAPFIETP-DGLRYTYGDLDAASARLANLLVALGVKPGDRVAVQVEKSPEALALYLATLRAGAV 79 (504)
T ss_pred CccHHHHHHHHh-hCCCCeEEEeC-CCCEEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHcCcE
Confidence 357899999999 99999999874 3789999999999999999999999999999999999999999999999999999
Q ss_pred EeecCCCCCHHHHHHHHHhcCceEEEEcccchHHHHhhhhhcCce-EEEeCCCCCCccchhhhhhhcccCCCCcccCCCC
Q 014952 104 STTANPFYTPPEIAKQAIASKAKIIITQAVYNDKVRDLSEHHGAR-IVTIDPPPENCLHFSELITQADENEIPAVKINPD 182 (415)
Q Consensus 104 ~v~l~~~~~~~~~~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~-~i~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 182 (415)
++|+++.++.+++..+++.+++++++++....+.+.......... ++.++.... ..+.+. ..............++
T Consensus 80 ~v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~-~~~~~~~~~~~~~~~~ 156 (504)
T PRK07514 80 FLPLNTAYTLAELDYFIGDAEPALVVCDPANFAWLSKIAAAAGAPHVETLDADGT--GSLLEA-AAAAPDDFETVPRGAD 156 (504)
T ss_pred EEECCCCCCHHHHHHHHHhCCCcEEEEccchhHHHHHhhhccCCceEEEecCCCc--ccHHHh-hhhcCcccCcccCCCC
Confidence 999999999999999999999999999988777666554433333 444443211 112222 1111112223345678
Q ss_pred CeEEEecCCCCCCCCceeeechHHHHHHHhhhhcCCCCCccCCCCcEEEEccchHHHHhhHHHHHHHHHcCcEEEEcCCC
Q 014952 183 DVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIMQKF 262 (415)
Q Consensus 183 ~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~l~~l~~G~~~v~~~~~ 262 (415)
+.++|+|||||||.||+|.++|.++......... .+.+.+++++++.+|++|..++...++.++..|+++++.+..
T Consensus 157 ~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~----~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~ 232 (504)
T PRK07514 157 DLAAILYTSGTTGRSKGAMLSHGNLLSNALTLVD----YWRFTPDDVLIHALPIFHTHGLFVATNVALLAGASMIFLPKF 232 (504)
T ss_pred CeEEEEECCCCCCCCcEEEEecHHHHHHHHHHHH----HhCCCCccEEEEecchHHHHHHHHHHHHHHhcCcEEEECCCC
Confidence 9999999999999999999999999988776665 345788999999999999999877788999999999999989
Q ss_pred CHHHHHHHHHhcCceeeecchHHHHHHHcCCCCCCCCcccceeeeecCCCCCHHHHHHHHhhCCCCccccccccccCCcc
Q 014952 263 DIVKLMELVQKYKVTVAPFVPPIVLAVAKSGDVDKYDMSSIRTVMSGAAPMGKELEDAVRAKLPHAKLGQGYGMTEAGPV 342 (415)
Q Consensus 263 ~~~~~~~~l~~~~~t~l~~~p~~l~~l~~~~~~~~~~l~~lr~v~~gG~~l~~~~~~~~~~~~~~~~~~~~YG~tE~~~~ 342 (415)
++..+++.+ .++|++.++|.++..+++....+...++++|.+++||+++++++.+.+.+.+ +.++++.||+||++..
T Consensus 233 ~~~~~~~~i--~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~~~~gg~~~~~~~~~~~~~~~-~~~~~~~YG~tE~~~~ 309 (504)
T PRK07514 233 DPDAVLALM--PRATVMMGVPTFYTRLLQEPRLTREAAAHMRLFISGSAPLLAETHREFQERT-GHAILERYGMTETNMN 309 (504)
T ss_pred CHHHHHHHH--HhheeeecHHHHHHHHHcCCCCCcccccceeeEEecCCCCCHHHHHHHHHHh-CCcceeeccccccccc
Confidence 999999999 3799999999999999887766667789999999999999999999999998 7899999999999854
Q ss_pred ccccccccCCccccCCCcccccccCCeEEEEeCCCCCCCCCCCceeEEEecCccccccccCCcceeeeee
Q 014952 343 LSMCLAFAKEPFEIKSGACGTVVRNAEMKIVDPDTGISLPRNQAGEICIRGAQIMKGTYHIYAPFLLSIV 412 (415)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~G~p~~~~~v~i~d~~~~~~~~~g~~Gel~v~~~~~~~gY~~~~~~~~~~~~ 412 (415)
.... .......+++|+|+++++++|+|++++++++.|+.|||+++|+.++.||+++++.+...|.
T Consensus 310 ~~~~-----~~~~~~~~~~G~~~~~~~v~i~d~~~~~~~~~g~~Gel~i~~~~~~~gy~~~~~~~~~~~~ 374 (504)
T PRK07514 310 TSNP-----YDGERRAGTVGFPLPGVSLRVTDPETGAELPPGEIGMIEVKGPNVFKGYWRMPEKTAEEFR 374 (504)
T ss_pred ccCC-----ccccccCcccccCCCCcEEEEEECCCCCCCCCCCceEEEEecCCccccccCCchhhhhhcc
Confidence 3221 1223345789999999999999988899999999999999999999999999998877664
No 44
>PRK06839 acyl-CoA synthetase; Validated
Probab=100.00 E-value=2.1e-49 Score=387.95 Aligned_cols=363 Identities=25% Similarity=0.360 Sum_probs=306.4
Q ss_pred CHHhHHHhhhccCCCCcEEEeCCCCCeeeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEcCCchhHHHHHHHHHHhCCeE
Q 014952 26 PLHTYCFENISQFADRPCIINGPTGDVYTYADVELTSRKVAAGLSK-LGVQKGDVIMLLLQNCPQFVFAFLGASYIGATS 104 (415)
Q Consensus 26 tl~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~~a~~L~~-~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~ 104 (415)
.+.+.|.++++.+|+++|++++ ++.+||+||.++++++|+.|++ .|+++|++|+++++|+.+++++++||+++|+++
T Consensus 3 ~~~~~~~~~a~~~p~~~a~~~~--~~~~ty~~l~~~~~~la~~L~~~~g~~~~~~V~i~~~~~~~~~~~~la~~~~G~~~ 80 (496)
T PRK06839 3 GIAYWIEKRAYLHPDRIAIITE--EEEMTYKQLHEYVSKVAAYLIYELNVKKGERIAILSQNSLEYIVLLFAIAKVECIA 80 (496)
T ss_pred cHHHHHHHHHHHCCCCeEEEEC--CceEEHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHhcCcEE
Confidence 5788999999999999999987 8999999999999999999985 799999999999999999999999999999999
Q ss_pred eecCCCCCHHHHHHHHHhcCceEEEEcccchHHHHhhhhhcC-ceEEEeCCCCCCccchhhhhhhcccCCCCcccCCCCC
Q 014952 105 TTANPFYTPPEIAKQAIASKAKIIITQAVYNDKVRDLSEHHG-ARIVTIDPPPENCLHFSELITQADENEIPAVKINPDD 183 (415)
Q Consensus 105 v~l~~~~~~~~~~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~-~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 183 (415)
+|+++.++.+++..+++++++++++++++..+.......... ..++.+.+ ++++ .... ........+++
T Consensus 81 ~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~-~~~~--~~~~~~~~~~~ 150 (496)
T PRK06839 81 VPLNIRLTENELIFQLKDSGTTVLFVEKTFQNMALSMQKVSYVQRVISITS-------LKEI-EDRK--IDNFVEKNESA 150 (496)
T ss_pred EecCcccCHHHHHHHHHhcCceEEEEcHHHHHHHHHhhhccCcceEEEecc-------hHhh-hccC--CCCCCCCCCCC
Confidence 999999999999999999999999999877666555433222 23333321 2222 1111 11223445688
Q ss_pred eEEEecCCCCCCCCceeeechHHHHHHHhhhhcCCCCCccCCCCcEEEEccchHHHHhhHHHHHHHHHcCcEEEEcCCCC
Q 014952 184 VVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIMQKFD 263 (415)
Q Consensus 184 ~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~l~~l~~G~~~v~~~~~~ 263 (415)
+++|+|||||||.||+|.++|+++......... .+.+..+++++..+|++|..++....+.++..|+++++.+.++
T Consensus 151 ~~~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~----~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~g~~~~~~~~~~ 226 (496)
T PRK06839 151 SFIICYTSGTTGKPKGAVLTQENMFWNALNNTF----AIDLTMHDRSIVLLPLFHIGGIGLFAFPTLFAGGVIIVPRKFE 226 (496)
T ss_pred cEEEEeCCCCCCCCcEEEEEhHHHHHHHHHHHH----HcCCCCCCeEEEeeCCcchhhHHHHHHHHHhcCcEEEEccCCC
Confidence 999999999999999999999998766554444 3457789999999999999998766788999999999998899
Q ss_pred HHHHHHHHHhcCceeeecchHHHHHHHcCCCCCCCCcccceeeeecCCCCCHHHHHHHHhhCCCCccccccccccCCccc
Q 014952 264 IVKLMELVQKYKVTVAPFVPPIVLAVAKSGDVDKYDMSSIRTVMSGAAPMGKELEDAVRAKLPHAKLGQGYGMTEAGPVL 343 (415)
Q Consensus 264 ~~~~~~~l~~~~~t~l~~~p~~l~~l~~~~~~~~~~l~~lr~v~~gG~~l~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~ 343 (415)
+..+++.++++++|++.++|.+++.+++.......+++++|.+++||++++.++.+.+++. +.++.+.||+||++..+
T Consensus 227 ~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~~~~gG~~~~~~~~~~~~~~--g~~~~~~YG~tE~~~~~ 304 (496)
T PRK06839 227 PTKALSMIEKHKVTVVMGVPTIHQALINCSKFETTNLQSVRWFYNGGAPCPEELMREFIDR--GFLFGQGFGMTETSPTV 304 (496)
T ss_pred HHHHHHHHHhhCCeEEEehHHHHHHHHhCcccccCCCcccceEEECCCCCCHHHHHHHHHh--CCeeEeeccCCCCCcce
Confidence 9999999999999999999999999998876666778999999999999999999999986 78999999999999644
Q ss_pred cccccccCCccccCCCcccccccCCeEEEEeCCCCCCCCCCCceeEEEecCccccccccCCcceeee
Q 014952 344 SMCLAFAKEPFEIKSGACGTVVRNAEMKIVDPDTGISLPRNQAGEICIRGAQIMKGTYHIYAPFLLS 410 (415)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~G~p~~~~~v~i~d~~~~~~~~~g~~Gel~v~~~~~~~gY~~~~~~~~~~ 410 (415)
... .........+++|+|+++++++|+|++ ++.++.|+.|||+|+|+.++.||+++|+.+...
T Consensus 305 ~~~---~~~~~~~~~~~~G~p~~~~~~~i~d~~-~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~ 367 (496)
T PRK06839 305 FML---SEEDARRKVGSIGKPVLFCDYELIDEN-KNKVEVGEVGELLIRGPNVMKEYWNRPDATEET 367 (496)
T ss_pred Eec---ccccccccCCCCcccCCCceEEEECCC-cCCCCCCCceEEEEECCCcchhhcCChHHHHHH
Confidence 332 112223456789999999999999955 677999999999999999999999999887644
No 45
>PRK05852 acyl-CoA synthetase; Validated
Probab=100.00 E-value=2.8e-49 Score=390.03 Aligned_cols=388 Identities=21% Similarity=0.284 Sum_probs=304.2
Q ss_pred CCCCCCCCCCCHHhHHHhhhccCCCCcEEEeCCCCCeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHH
Q 014952 16 LPDIYIPNHLPLHTYCFENISQFADRPCIINGPTGDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFL 95 (415)
Q Consensus 16 ~~~~~~~~~~tl~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~l 95 (415)
--+.+.|+--|+.+.|.++++++|+++|+++.++.+.+||+||.++++++|+.|.++|+++||+|+++++|+.+++++++
T Consensus 7 ~~~~~~~~~~~l~~~l~~~a~~~p~~~ai~~~~~~~~~Ty~~l~~~~~~~a~~L~~~gv~~gd~V~i~~~n~~~~~~~~l 86 (534)
T PRK05852 7 AAPMASDFGPRIADLVEVAATRLPEAPALVVTADRIAISYRDLARLVDDLAGQLTRSGLLPGDRVALRMGSNAEFVVALL 86 (534)
T ss_pred ccchhhhhcccHHHHHHHHHHhCCCCcEEEecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcHHHHHHHH
Confidence 33456677789999999999999999999987556789999999999999999999999999999999999999999999
Q ss_pred HHHHhCCeEeecCCCCCHHHHHHHHHhcCceEEEEcccchHHHHhhhhhcCceEEEeCC-C--CCCccchhhhhhh-ccc
Q 014952 96 GASYIGATSTTANPFYTPPEIAKQAIASKAKIIITQAVYNDKVRDLSEHHGARIVTIDP-P--PENCLHFSELITQ-ADE 171 (415)
Q Consensus 96 A~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~i~~~~-~--~~~~~~~~~l~~~-~~~ 171 (415)
||+++|++++++++.++.+++.++++++++++++++..................+.+.. . .+..... .+... ...
T Consensus 87 A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 165 (534)
T PRK05852 87 AASRADLVVVPLDPALPIAEQRVRSQAAGARVVLIDADGPHDRAEPTTRWWPLTVNVGGDSGPSGGTLSV-HLDAATEPT 165 (534)
T ss_pred HHHHcCcEEeecCCCCCcHHHHHHHHhCCCCEEEEcCCCcchhccccccccceeeeeccccccccccccc-ccccccCCC
Confidence 99999999999999999999999999999999999865332211110000011111111 1 0111100 00000 000
Q ss_pred CCCCcccCCCCCeEEEecCCCCCCCCceeeechHHHHHHHhhhhcCCCCCccCCCCcEEEEccchHHHHhhHHHHHHHHH
Q 014952 172 NEIPAVKINPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALR 251 (415)
Q Consensus 172 ~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~l~~l~ 251 (415)
..........++.++|+|||||||.||+|.++|+++...+..... .+.+.++|++++.+|++|..++...++.++.
T Consensus 166 ~~~~~~~~~~~~~a~il~TSGTTG~PKgv~~~~~~~~~~~~~~~~----~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~ 241 (534)
T PRK05852 166 PATSTPEGLRPDDAMIMFTGGTTGLPKMVPWTHANIASSVRAIIT----GYRLSPRDATVAVMPLYHGHGLIAALLATLA 241 (534)
T ss_pred ccccccCCCCCCceEEEeCCCCCCCCcEEEecHHHHHHHHHHHHH----HhCCCCcceEEEecCcchhHHHHHHHHHHHh
Confidence 000111222467899999999999999999999999988877766 4467889999999999999999877889999
Q ss_pred cCcEEEEcC--CCCHHHHHHHHHhcCceeeecchHHHHHHHcCCCCC--CCCcccceeeeecCCCCCHHHHHHHHhhCCC
Q 014952 252 VGAAILIMQ--KFDIVKLMELVQKYKVTVAPFVPPIVLAVAKSGDVD--KYDMSSIRTVMSGAAPMGKELEDAVRAKLPH 327 (415)
Q Consensus 252 ~G~~~v~~~--~~~~~~~~~~l~~~~~t~l~~~p~~l~~l~~~~~~~--~~~l~~lr~v~~gG~~l~~~~~~~~~~~~~~ 327 (415)
.|+++++.+ .+++..+++.++++++|++.++|.++..|.+..... ...++++|.+.++|+++++++.+.+.+.+ +
T Consensus 242 ~g~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~i~~~G~~~~~~~~~~~~~~~-~ 320 (534)
T PRK05852 242 SGGAVLLPARGRFSAHTFWDDIKAVGATWYTAVPTIHQILLERAATEPSGRKPAALRFIRSCSAPLTAETAQALQTEF-A 320 (534)
T ss_pred cCCeEEeCCCcCcCHHHHHHHHHHcCCcEEEcChHHHHHHHhhcccccccccCCCeeEEEECCCCCCHHHHHHHHHHh-C
Confidence 999988864 478999999999999999999999999998765432 34578999999999999999999999999 8
Q ss_pred CccccccccccCCcccccccccc---CCccccCCCcccccccCCeEEEEeCCCCCCCCCCCceeEEEecCccccccccCC
Q 014952 328 AKLGQGYGMTEAGPVLSMCLAFA---KEPFEIKSGACGTVVRNAEMKIVDPDTGISLPRNQAGEICIRGAQIMKGTYHIY 404 (415)
Q Consensus 328 ~~~~~~YG~tE~~~~~~~~~~~~---~~~~~~~~~~~G~p~~~~~v~i~d~~~~~~~~~g~~Gel~v~~~~~~~gY~~~~ 404 (415)
.++++.||+||++..++...... ........+..|+ .++++++|+|+ +++++++|+.|||+|+|+.+++|||++|
T Consensus 321 ~~v~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~g~~g~-~~g~~~~i~d~-~g~~~~~g~~Gel~v~g~~v~~gY~~~~ 398 (534)
T PRK05852 321 APVVCAFGMTEATHQVTTTQIEGIGQTENPVVSTGLVGR-STGAQIRIVGS-DGLPLPAGAVGEVWLRGTTVVRGYLGDP 398 (534)
T ss_pred CChhhccCccccchhhhcCCccccccccCcccccccCCC-CCCCeEEEECC-CCCCCCCCCceEEEEecCcccchhcCCc
Confidence 99999999999987555431100 0111122334444 69999999995 4899999999999999999999999999
Q ss_pred cceeeee
Q 014952 405 APFLLSI 411 (415)
Q Consensus 405 ~~~~~~~ 411 (415)
+.+...|
T Consensus 399 ~~t~~~~ 405 (534)
T PRK05852 399 TITAANF 405 (534)
T ss_pred ccchhhh
Confidence 9988765
No 46
>PRK13382 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=4.7e-49 Score=388.24 Aligned_cols=361 Identities=20% Similarity=0.287 Sum_probs=300.7
Q ss_pred CCCHHhHHHhhhccCCCCcEEEeCCCCCeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHHhCCe
Q 014952 24 HLPLHTYCFENISQFADRPCIINGPTGDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGAT 103 (415)
Q Consensus 24 ~~tl~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~ 103 (415)
..++.+.|.++++++|+++|+++. ++.+||+||.++++++|++|.++|+++||+|+++++|+.++++++|||+++|++
T Consensus 42 ~~~~~~~l~~~a~~~p~~~a~~~~--~~~~Ty~el~~~~~~~A~~L~~~g~~~g~~V~i~~~n~~~~~~~~lA~~~~G~~ 119 (537)
T PRK13382 42 GMGPTSGFAIAAQRCPDRPGLIDE--LGTLTWRELDERSDALAAALQALPIGEPRVVGIMCRNHRGFVEALLAANRIGAD 119 (537)
T ss_pred cCCHHHHHHHHHHhCCCCeEEEeC--CCeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEecCcHHHHHHHHHHHHcCcE
Confidence 378999999999999999999986 789999999999999999999999999999999999999999999999999999
Q ss_pred EeecCCCCCHHHHHHHHHhcCceEEEEcccchHHHHhhhhhcC--ceEEEeCCCCCCccchhhhhhhcccCCCCcccCCC
Q 014952 104 STTANPFYTPPEIAKQAIASKAKIIITQAVYNDKVRDLSEHHG--ARIVTIDPPPENCLHFSELITQADENEIPAVKINP 181 (415)
Q Consensus 104 ~v~l~~~~~~~~~~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~--~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 181 (415)
++|+++.++.+++.++++++++++++++.+..+.+........ ..++.+++.. ....++++ ....... .....+
T Consensus 120 ~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~--~~~~~~ 195 (537)
T PRK13382 120 ILLLNTSFAGPALAEVVTREGVDTVIYDEEFSATVDRALADCPQATRIVAWTDED-HDLTVEVL-IAAHAGQ--RPEPTG 195 (537)
T ss_pred EEecCcccCHHHHHHHHHhcCCCEEEEchhhHHHHHHHHhhccccceEEEecCCc-ccccHHHH-hhccCcC--CCCCCC
Confidence 9999999999999999999999999999877666554332211 2233332211 12234444 2211111 112346
Q ss_pred CCeEEEecCCCCCCCCceeeechHHHHHHHhhhhcCCCCCccCCCCcEEEEccchHHHHhhHHHHHHHHHcCcEEEEcCC
Q 014952 182 DDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIMQK 261 (415)
Q Consensus 182 ~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~l~~l~~G~~~v~~~~ 261 (415)
++.++++|||||||.||+|.++|.++......... .+.+..+++++...|++|.+++. .++.++..|+++++.+.
T Consensus 196 ~~~~~il~TSGTTG~PKgv~~s~~~~~~~~~~~~~----~~~~~~~~~~l~~~p~~~~~g~~-~~~~~l~~g~~~~~~~~ 270 (537)
T PRK13382 196 RKGRVILLTSGTTGTPKGARRSGPGGIGTLKAILD----RTPWRAEEPTVIVAPMFHAWGFS-QLVLAASLACTIVTRRR 270 (537)
T ss_pred CCCeEEEECCCCCCCCCEEEeccchHHHHHHHHHH----hhCCCCCCeEEEecChHhhhHHH-HHHHHHhcCcEEEECCC
Confidence 78899999999999999999999888877766655 34567889999999999999986 57888999999999888
Q ss_pred CCHHHHHHHHHhcCceeeecchHHHHHHHcCCC--CCCCCcccceeeeecCCCCCHHHHHHHHhhCCCCccccccccccC
Q 014952 262 FDIVKLMELVQKYKVTVAPFVPPIVLAVAKSGD--VDKYDMSSIRTVMSGAAPMGKELEDAVRAKLPHAKLGQGYGMTEA 339 (415)
Q Consensus 262 ~~~~~~~~~l~~~~~t~l~~~p~~l~~l~~~~~--~~~~~l~~lr~v~~gG~~l~~~~~~~~~~~~~~~~~~~~YG~tE~ 339 (415)
+++..+++.|+++++|++.++|.++..|++... ....+++++|.+++||+++++++.+++.+.+ +..+++.||+||+
T Consensus 271 ~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~-~~~i~~~YG~TE~ 349 (537)
T PRK13382 271 FDPEATLDLIDRHRATGLAVVPVMFDRIMDLPAEVRNRYSGRSLRFAAASGSRMRPDVVIAFMDQF-GDVIYNNYNATEA 349 (537)
T ss_pred cCHHHHHHHHHHhCCEEEEehHHHHHHHHcCCchhcccCCccceeEEEEcCCCCCHHHHHHHHHHc-CCcEEeccccccc
Confidence 999999999999999999999999999987643 2334567999999999999999999999999 6789999999999
Q ss_pred CccccccccccCCccccCCCcccccccCCeEEEEeCCCCCCCCCCCceeEEEecCccccccc
Q 014952 340 GPVLSMCLAFAKEPFEIKSGACGTVVRNAEMKIVDPDTGISLPRNQAGEICIRGAQIMKGTY 401 (415)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~G~p~~~~~v~i~d~~~~~~~~~g~~Gel~v~~~~~~~gY~ 401 (415)
+.+...+. ......++++|+|+++++++|+|+ ++++++.|+.|||+++|++++.||+
T Consensus 350 ~~~~~~~~----~~~~~~~~~vG~p~~~~~~~i~d~-~~~~~~~g~~GEl~v~g~~~~~gY~ 406 (537)
T PRK13382 350 GMIATATP----ADLRAAPDTAGRPAEGTEIRILDQ-DFREVPTGEVGTIFVRNDTQFDGYT 406 (537)
T ss_pred CcceecCh----hHhccCCCCccccCcCcEEEEECC-CCCCCCCCCeeEEEEEcCCcccCcc
Confidence 86554331 112345678999999999999995 5899999999999999999999998
No 47
>PRK07059 Long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=5.6e-49 Score=389.84 Aligned_cols=395 Identities=28% Similarity=0.440 Sum_probs=313.4
Q ss_pred cceeecCCCCCCCC-----CCCCHHhHHHhhhccCCCCcEEEeCCCCCeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEE
Q 014952 9 EFIFRSKLPDIYIP-----NHLPLHTYCFENISQFADRPCIINGPTGDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLL 83 (415)
Q Consensus 9 ~~~~~~~~~~~~~~-----~~~tl~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~ 83 (415)
.++|.+.+++-..+ +..++.+.|...++++|+++|+++. +..+||.||.++++++|+.|.+.|+++||+|+++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~a~~~p~~~a~~~~--~~~lTy~~l~~~~~~~a~~L~~~gi~~gd~V~i~ 79 (557)
T PRK07059 2 EKIWLKSYPPGVPAEIDASQYPSLADLLEESFRQYADRPAFICM--GKAITYGELDELSRALAAWLQSRGLAKGARVAIM 79 (557)
T ss_pred CCCccccCCCCCCCccCCCCCCCHHHHHHHHHHHcCCCceEEEc--CceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEE
Confidence 35777776653222 2368999999999999999999987 7899999999999999999999999999999999
Q ss_pred cCCchhHHHHHHHHHHhCCeEeecCCCCCHHHHHHHHHhcCceEEEEcccchHHHHhhhhhcCceEEEeCC---------
Q 014952 84 LQNCPQFVFAFLGASYIGATSTTANPFYTPPEIAKQAIASKAKIIITQAVYNDKVRDLSEHHGARIVTIDP--------- 154 (415)
Q Consensus 84 ~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~i~~~~--------- 154 (415)
++|+.+++++++||+++|++++|++|.++.+++.+++++++++++++++.....+...........+.+..
T Consensus 80 ~~n~~~~~~~~la~~~~G~~~v~v~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (557)
T PRK07059 80 MPNVLQYPVAIAAVLRAGYVVVNVNPLYTPRELEHQLKDSGAEAIVVLENFATTVQQVLAKTAVKHVVVASMGDLLGFKG 159 (557)
T ss_pred CCCCHHHHHHHHHHHhcCeEEeccCcccCHHHHHHHHHccCceEEEEchhhHHHHHHhhcccCCceeEEecccccccccc
Confidence 99999999999999999999999999999999999999999999999887666555443322222111110
Q ss_pred -----------------CCCCccchhhhhhhcccCCCCcccCCCCCeEEEecCCCCCCCCceeeechHHHHHHHhhhhcC
Q 014952 155 -----------------PPENCLHFSELITQADENEIPAVKINPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDG 217 (415)
Q Consensus 155 -----------------~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~ 217 (415)
.......+++++..............++++++|+|||||||.||+|.++|.++..+.......
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~il~TSGTTG~PK~v~~s~~~l~~~~~~~~~~ 239 (557)
T PRK07059 160 HIVNFVVRRVKKMVPAWSLPGHVRFNDALAEGARQTFKPVKLGPDDVAFLQYTGGTTGVSKGATLLHRNIVANVLQMEAW 239 (557)
T ss_pred cccccccccccccccccCCCCcccHHHHhhccCCCCCCCCCCCcCceEEEEeCCCCCCCCcEEEeecHHHHHHHHHHhhh
Confidence 011122333332222222223345667899999999999999999999999998765443321
Q ss_pred CCCCccC---CCCcEEEEccchHHHHhhHHHHHHHHHcCcEEEEcC-CCCHHHHHHHHHhcCceeeecchHHHHHHHcCC
Q 014952 218 ENPNLYL---HKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIMQ-KFDIVKLMELVQKYKVTVAPFVPPIVLAVAKSG 293 (415)
Q Consensus 218 ~~~~~~~---~~~~~~~~~~pl~~~~g~~~~~l~~l~~G~~~v~~~-~~~~~~~~~~l~~~~~t~l~~~p~~l~~l~~~~ 293 (415)
....+.. .....+++.+|++|.+++....+.++..|++.++.+ ..++..+++.++++++|.+.++|.++..+.+..
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~pl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~p~~~~~l~~~~ 319 (557)
T PRK07059 240 LQPAFEKKPRPDQLNFVCALPLYHIFALTVCGLLGMRTGGRNILIPNPRDIPGFIKELKKYQVHIFPAVNTLYNALLNNP 319 (557)
T ss_pred hcccccccCCCCCcEEEEeCCcHHHHHHHHHHHHHHhhcceEEEecCCcCHHHHHHHHHHhCCeeeecCHHHHHHHHcCc
Confidence 1101111 123567888999999887666777888888877665 458899999999999999999999999999877
Q ss_pred CCCCCCcccceeeeecCCCCCHHHHHHHHhhCCCCccccccccccCCccccccccccCCccccCCCcccccccCCeEEEE
Q 014952 294 DVDKYDMSSIRTVMSGAAPMGKELEDAVRAKLPHAKLGQGYGMTEAGPVLSMCLAFAKEPFEIKSGACGTVVRNAEMKIV 373 (415)
Q Consensus 294 ~~~~~~l~~lr~v~~gG~~l~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~G~p~~~~~v~i~ 373 (415)
.....+++++|.++.||+++++.+.+++.+.+ +.++++.||+||++.+++.+. .......+++|+|+++++++|+
T Consensus 320 ~~~~~~~~~l~~~~~gg~~~~~~~~~~~~~~~-~~~~~~~YG~tE~~~~~~~~~----~~~~~~~~~vG~p~~g~~v~i~ 394 (557)
T PRK07059 320 DFDKLDFSKLIVANGGGMAVQRPVAERWLEMT-GCPITEGYGLSETSPVATCNP----VDATEFSGTIGLPLPSTEVSIR 394 (557)
T ss_pred CcCcCCchhheEEEeccccCCHHHHHHHHHHh-CCCeeeccccccccchhhcCC----CCCCCcCCcccCccCCcEEEEE
Confidence 66667788999999999999999999999988 899999999999997655431 1122345789999999999999
Q ss_pred eCCCCCCCCCCCceeEEEecCccccccccCCcceeeee
Q 014952 374 DPDTGISLPRNQAGEICIRGAQIMKGTYHIYAPFLLSI 411 (415)
Q Consensus 374 d~~~~~~~~~g~~Gel~v~~~~~~~gY~~~~~~~~~~~ 411 (415)
| +++++++.|+.|||+++|+.++.||+++++.+...|
T Consensus 395 d-~~~~~~~~g~~Gel~v~g~~~~~gY~~~~~~~~~~~ 431 (557)
T PRK07059 395 D-DDGNDLPLGEPGEICIRGPQVMAGYWNRPDETAKVM 431 (557)
T ss_pred C-CCCCCCCCCCceEEEEeCCccchhhhcCHHHHhhhc
Confidence 9 558999999999999999999999999998877655
No 48
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=100.00 E-value=1.6e-49 Score=425.10 Aligned_cols=383 Identities=24% Similarity=0.347 Sum_probs=314.8
Q ss_pred CCCCCHHhHHHhhhccCCCCcEEEeCCCCCeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHHhC
Q 014952 22 PNHLPLHTYCFENISQFADRPCIINGPTGDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIG 101 (415)
Q Consensus 22 ~~~~tl~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G 101 (415)
+...|+.+.+.++++++|+++|+++. .++.+||+||.++++++|+.|++ ++++||+|+++++|+.+++++++||+++|
T Consensus 612 ~~~~~l~~~~~~~a~~~p~~~a~~~~-~~~~~Ty~el~~~~~~~a~~L~~-~~~~g~~V~i~~~n~~~~~~~~la~~~~G 689 (1146)
T PRK08633 612 EALPPLAEAWIDTAKRNWSRLAVADS-TGGELSYGKALTGALALARLLKR-ELKDEENVGILLPPSVAGALANLALLLAG 689 (1146)
T ss_pred CCCCCHHHHHHHHHHhcCCCcEEEcC-CCCcCcHHHHHHHHHHHHHHHHH-hCCCCCeEEEECCCchHHHHHHHHHHHcC
Confidence 34578999999999999999999974 36799999999999999999987 58999999999999999999999999999
Q ss_pred CeEeecCCCCCHHHHHHHHHhcCceEEEEcccchHHHHhhh---h-hcCceEEEeCCCCCCcc---chhhhhhhcccCC-
Q 014952 102 ATSTTANPFYTPPEIAKQAIASKAKIIITQAVYNDKVRDLS---E-HHGARIVTIDPPPENCL---HFSELITQADENE- 173 (415)
Q Consensus 102 ~~~v~l~~~~~~~~~~~~l~~~~~~~vl~~~~~~~~~~~~~---~-~~~~~~i~~~~~~~~~~---~~~~l~~~~~~~~- 173 (415)
++++|+++..+.+++.++++++++++++++++..+.+.... . ....+++..++...... .+++.........
T Consensus 690 ~v~v~l~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 769 (1146)
T PRK08633 690 KVPVNLNYTASEAALKSAIEQAQIKTVITSRKFLEKLKNKGFDLELPENVKVIYLEDLKAKISKVDKLTALLAARLLPAR 769 (1146)
T ss_pred CEEEEeCCCcCHHHHHHHHHHcCCCEEEEcHHHHHHHhccCCchhcccCceEEEeehhccccchhHHHHHHHHhccCCHH
Confidence 99999999999999999999999999999987666554211 0 11234444443221111 1221111100000
Q ss_pred --CC--cccCCCCCeEEEecCCCCCCCCceeeechHHHHHHHhhhhcCCCCCccCCCCcEEEEccchHHHHhhHHHHHHH
Q 014952 174 --IP--AVKINPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCA 249 (415)
Q Consensus 174 --~~--~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~l~~ 249 (415)
.. .....++++++|+|||||||.||+|.++|+++......... .+...++|++++.+|++|..++...++.+
T Consensus 770 ~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~----~~~~~~~d~~l~~~p~~h~~g~~~~~~~~ 845 (1146)
T PRK08633 770 LLKRLYGPTFKPDDTATIIFSSGSEGEPKGVMLSHHNILSNIEQISD----VFNLRNDDVILSSLPFFHSFGLTVTLWLP 845 (1146)
T ss_pred HHHhhccCCCCCCCEEEEEECCCCCCCCceEEechHHHHHHHHHHHH----hcCCCCCCEEEEcCcHHHHHhHHHHHHHH
Confidence 00 13456789999999999999999999999999988877766 44578899999999999999998668889
Q ss_pred HHcCcEEEEcC-CCCHHHHHHHHHhcCceeeecchHHHHHHHcCCCCCCCCcccceeeeecCCCCCHHHHHHHHhhCCCC
Q 014952 250 LRVGAAILIMQ-KFDIVKLMELVQKYKVTVAPFVPPIVLAVAKSGDVDKYDMSSIRTVMSGAAPMGKELEDAVRAKLPHA 328 (415)
Q Consensus 250 l~~G~~~v~~~-~~~~~~~~~~l~~~~~t~l~~~p~~l~~l~~~~~~~~~~l~~lr~v~~gG~~l~~~~~~~~~~~~~~~ 328 (415)
+..|+++++.+ .+++..+++.++++++|++.++|.+++.+.+....+..+++++|.+++||+++++++.+++++.+ +.
T Consensus 846 l~~g~~~v~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~~~~gg~~~~~~~~~~~~~~~-g~ 924 (1146)
T PRK08633 846 LLEGIKVVYHPDPTDALGIAKLVAKHRATILLGTPTFLRLYLRNKKLHPLMFASLRLVVAGAEKLKPEVADAFEEKF-GI 924 (1146)
T ss_pred HHCCCEEEEeCCCCCHHHHHHHHHHcCCeEEEecHHHHHHHHhccccCcccCCCeeeEEEcCCcCCHHHHHHHHHHh-CC
Confidence 99999998876 47899999999999999999999999999887666667789999999999999999999999999 89
Q ss_pred ccccccccccCCccccccccccCC-----ccccCCCcccccccCCeEEEEeCCCCCCCCCCCceeEEEecCccccccccC
Q 014952 329 KLGQGYGMTEAGPVLSMCLAFAKE-----PFEIKSGACGTVVRNAEMKIVDPDTGISLPRNQAGEICIRGAQIMKGTYHI 403 (415)
Q Consensus 329 ~~~~~YG~tE~~~~~~~~~~~~~~-----~~~~~~~~~G~p~~~~~v~i~d~~~~~~~~~g~~Gel~v~~~~~~~gY~~~ 403 (415)
++++.||+||++++++.+...... ....+.+++|+|+|+++++|+|++++++++.|+.|||+++|++++.||+++
T Consensus 925 ~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~p~~~~~v~i~d~~~~~~~~~g~~Gel~v~g~~~~~gY~~~ 1004 (1146)
T PRK08633 925 RILEGYGATETSPVASVNLPDVLAADFKRQTGSKEGSVGMPLPGVAVRIVDPETFEELPPGEDGLILIGGPQVMKGYLGD 1004 (1146)
T ss_pred CeecccccccCcceEEEecCcccccccccccCCCCCCccccCCCCEEEEEcCCCCccCCCCCceEEEEcCCCccccccCC
Confidence 999999999998766543211100 112356789999999999999998899999999999999999999999999
Q ss_pred Ccceeeee
Q 014952 404 YAPFLLSI 411 (415)
Q Consensus 404 ~~~~~~~~ 411 (415)
|+.+...|
T Consensus 1005 ~~~t~~~~ 1012 (1146)
T PRK08633 1005 PEKTAEVI 1012 (1146)
T ss_pred ccchHHHh
Confidence 99887655
No 49
>PRK07786 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=4.1e-49 Score=389.42 Aligned_cols=376 Identities=27% Similarity=0.372 Sum_probs=313.7
Q ss_pred CCCCHHhHHHhhhccCCCCcEEEeCCCCCeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHHhCC
Q 014952 23 NHLPLHTYCFENISQFADRPCIINGPTGDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGA 102 (415)
Q Consensus 23 ~~~tl~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~ 102 (415)
..+|+.+.+..+++++|+++|+++. ++.+||.||.++++++|..|.+.|+++||+|+++++|+.+++++++||+++|+
T Consensus 15 ~~~n~~~~~~~~a~~~~~~~a~~~~--~~~~ty~~l~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~~a~~~~G~ 92 (542)
T PRK07786 15 RRQNWVNQLARHALMQPDAPALRFL--GNTTTWRELDDRVAALAGALSRRGVGFGDRVLILMLNRTEFVESVLAANMLGA 92 (542)
T ss_pred cccCHHHHHHHHHHHCCCCeEEEeC--CCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHcCe
Confidence 4689999999999999999999987 78999999999999999999999999999999999999999999999999999
Q ss_pred eEeecCCCCCHHHHHHHHHhcCceEEEEcccchHHHHhhhhhcC-c-eEEEeCC-CCCCccchhhhhhhcccCCCCcccC
Q 014952 103 TSTTANPFYTPPEIAKQAIASKAKIIITQAVYNDKVRDLSEHHG-A-RIVTIDP-PPENCLHFSELITQADENEIPAVKI 179 (415)
Q Consensus 103 ~~v~l~~~~~~~~~~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~-~-~~i~~~~-~~~~~~~~~~l~~~~~~~~~~~~~~ 179 (415)
+++|+++..+.+++..++++++++.++++....+.+........ . .++.+++ ..+....++++..... ...+....
T Consensus 93 ~~vpl~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 171 (542)
T PRK07786 93 IAVPVNFRLTPPEIAFLVSDCGAHVVVTEAALAPVATAVRDIVPLLSTVVVAGGSSDDSVLGYEDLLAEAG-PAHAPVDI 171 (542)
T ss_pred EEEEcCccCCHHHHHHHHHhCCCcEEEEccchHHHHHHhhhccCccceEEEecCCCcccccCHHHHhhccC-CCCCCCCC
Confidence 99999999999999999999999999999877666554432212 2 2333332 2233455666533222 22233345
Q ss_pred CCCCeEEEecCCCCCCCCceeeechHHHHHHHhhhhcCCCCCccC-CCCcEEEEccchHHHHhhHHHHHHHHHcCcEEEE
Q 014952 180 NPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYL-HKEDVILCVLPLFHIYSLNSVLLCALRVGAAILI 258 (415)
Q Consensus 180 ~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~pl~~~~g~~~~~l~~l~~G~~~v~ 258 (415)
..++.++++|||||||.||+|.++|+++.......... +.+ ..+++.+...|++|.+|+. .++.++..|+++++
T Consensus 172 ~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~----~~~~~~~~~~~~~~p~~~~~g~~-~~~~~l~~G~~~v~ 246 (542)
T PRK07786 172 PNDSPALIMYTSGTTGRPKGAVLTHANLTGQAMTCLRT----NGADINSDVGFVGVPLFHIAGIG-SMLPGLLLGAPTVI 246 (542)
T ss_pred CCCCeEEEEeCCCCCccchhhhhhHHHHHHHHHHHHHh----cCCCCCCceEEEecchHHHHHHH-HHHHHHHccCEEEE
Confidence 56789999999999999999999999998877766552 233 5678999999999999986 58889999999998
Q ss_pred cC--CCCHHHHHHHHHhcCceeeecchHHHHHHHcCCCCCCCCcccceeeeecCCCCCHHHHHHHHhhCCCCcccccccc
Q 014952 259 MQ--KFDIVKLMELVQKYKVTVAPFVPPIVLAVAKSGDVDKYDMSSIRTVMSGAAPMGKELEDAVRAKLPHAKLGQGYGM 336 (415)
Q Consensus 259 ~~--~~~~~~~~~~l~~~~~t~l~~~p~~l~~l~~~~~~~~~~l~~lr~v~~gG~~l~~~~~~~~~~~~~~~~~~~~YG~ 336 (415)
.+ .+++..+++.++++++|+++++|.++..+.......... .++|.+++||++++.++.+++++.|++.++++.||+
T Consensus 247 ~~~~~~~~~~~~~~i~~~~~t~~~~~P~~l~~l~~~~~~~~~~-~~lr~i~~gg~~~~~~~~~~~~~~~~~~~l~~~YG~ 325 (542)
T PRK07786 247 YPLGAFDPGQLLDVLEAEKVTGIFLVPAQWQAVCAEQQARPRD-LALRVLSWGAAPASDTLLRQMAATFPEAQILAAFGQ 325 (542)
T ss_pred ccCCCcCHHHHHHHHHHcCCeEEEehHHHHHHHHhCcccCccC-cceEEEEECCCCCCHHHHHHHHHHcCCCeEEeeecc
Confidence 65 579999999999999999999999999998765443333 379999999999999999999999989999999999
Q ss_pred ccCCccccccccccCCccccCCCcccccccCCeEEEEeCCCCCCCCCCCceeEEEecCccccccccCCcceeeee
Q 014952 337 TEAGPVLSMCLAFAKEPFEIKSGACGTVVRNAEMKIVDPDTGISLPRNQAGEICIRGAQIMKGTYHIYAPFLLSI 411 (415)
Q Consensus 337 tE~~~~~~~~~~~~~~~~~~~~~~~G~p~~~~~v~i~d~~~~~~~~~g~~Gel~v~~~~~~~gY~~~~~~~~~~~ 411 (415)
||++++.+.+. ........+++|+|++++.++|+| +++++++.|+.|||+++|+.+++||+++++.++..|
T Consensus 326 tE~~~~~~~~~---~~~~~~~~~~~G~~~~~~~~~i~d-~~~~~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~f 396 (542)
T PRK07786 326 TEMSPVTCMLL---GEDAIRKLGSVGKVIPTVAARVVD-ENMNDVPVGEVGEIVYRAPTLMSGYWNNPEATAEAF 396 (542)
T ss_pred cccccceEecC---cccccccCCCccccCCCceEEEEC-CCCCCCcCCCceEEEEEChhhhhhhcCCHHHHHHHh
Confidence 99987544331 122234557899999999999999 558999999999999999999999999998887654
No 50
>PRK03640 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=100.00 E-value=3.6e-49 Score=384.95 Aligned_cols=356 Identities=26% Similarity=0.364 Sum_probs=299.4
Q ss_pred CCHHhHHHhhhccCCCCcEEEeCCCCCeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHHhCCeE
Q 014952 25 LPLHTYCFENISQFADRPCIINGPTGDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGATS 104 (415)
Q Consensus 25 ~tl~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~ 104 (415)
+|+++.|.++++++|+++|+++. ++.+||+||.++++++|+.|.+.|+++||+|+++++|+.+++++++|++++|+++
T Consensus 2 ~~~~~~l~~~a~~~p~~~a~~~~--~~~~Ty~el~~~~~~~a~~L~~~g~~~~~~v~i~~~~~~~~~~~~la~~~~G~~~ 79 (483)
T PRK03640 2 ETMPNWLKQRAFLTPDRTAIEFE--EKKVTFMELHEAVVSVAGKLAALGVKKGDRVALLMKNGMEMILVIHALQQLGAVA 79 (483)
T ss_pred CcHHHHHHHHHHhCCCceEEEeC--CeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHhCCcEE
Confidence 68999999999999999999987 7899999999999999999999999999999999999999999999999999999
Q ss_pred eecCCCCCHHHHHHHHHhcCceEEEEcccchHHHHhhhhhcCceEEEeCCCCCCccchhhhhhhcccCCCCcccCCCCCe
Q 014952 105 TTANPFYTPPEIAKQAIASKAKIIITQAVYNDKVRDLSEHHGARIVTIDPPPENCLHFSELITQADENEIPAVKINPDDV 184 (415)
Q Consensus 105 v~l~~~~~~~~~~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 184 (415)
+|+++..+.+++..++++++++.++++........... . ..++++...............++++
T Consensus 80 v~i~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~---~-------------~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (483)
T PRK03640 80 VLLNTRLSREELLWQLDDAEVKCLITDDDFEAKLIPGI---S-------------VKFAELMNGPKEEAEIQEEFDLDEV 143 (483)
T ss_pred EecCcCCCHHHHHHHHHhCCCCEEEEcchhhHHHhhhc---c-------------ccHHHHhhcccccCCCCCCCCCCCe
Confidence 99999999999999999999999999876554432210 0 0123331111111222334567899
Q ss_pred EEEecCCCCCCCCceeeechHHHHHHHhhhhcCCCCCccCCCCcEEEEccchHHHHhhHHHHHHHHHcCcEEEEcCCCCH
Q 014952 185 VALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIMQKFDI 264 (415)
Q Consensus 185 a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~l~~l~~G~~~v~~~~~~~ 264 (415)
++++|||||||.||+|.++|.++......... .+++.++++++..+|++|..++. .++.++..|+++++.+..++
T Consensus 144 a~i~~TSGtTG~PK~v~~s~~~~~~~~~~~~~----~~~~~~~d~~l~~~p~~~~~g~~-~~~~~l~~G~~~~~~~~~~~ 218 (483)
T PRK03640 144 ATIMYTSGTTGKPKGVIQTYGNHWWSAVGSAL----NLGLTEDDCWLAAVPIFHISGLS-ILMRSVIYGMRVVLVEKFDA 218 (483)
T ss_pred EEEEeCCCcCCCCcEEEEecHHHHHHHHHHHH----hcCCCcCcEEEEecCHHHHHHHH-HHHHHHhcCCEEEecCCCCH
Confidence 99999999999999999999998877665555 34678899999999999999987 47888999999999998999
Q ss_pred HHHHHHHHhcCceeeecchHHHHHHHcCCCCCCCCcccceeeeecCCCCCHHHHHHHHhhCCCCccccccccccCCcccc
Q 014952 265 VKLMELVQKYKVTVAPFVPPIVLAVAKSGDVDKYDMSSIRTVMSGAAPMGKELEDAVRAKLPHAKLGQGYGMTEAGPVLS 344 (415)
Q Consensus 265 ~~~~~~l~~~~~t~l~~~p~~l~~l~~~~~~~~~~l~~lr~v~~gG~~l~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~ 344 (415)
..+++.++++++|++.++|+++..|.+..... ....++|.+++||++++.++.+.+++. ++++++.||+||++..+.
T Consensus 219 ~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~-~~~~~lr~~~~~g~~~~~~~~~~~~~~--~~~~~~~YG~tE~~~~~~ 295 (483)
T PRK03640 219 EKINKLLQTGGVTIISVVSTMLQRLLERLGEG-TYPSSFRCMLLGGGPAPKPLLEQCKEK--GIPVYQSYGMTETASQIV 295 (483)
T ss_pred HHHHHHHHHhCCcEEEeHHHHHHHHHhCcCcc-ccCCcceEEEEcCCCCCHHHHHHHHHh--CCCeeeeeccCccccccc
Confidence 99999999999999999999999998664333 234789999999999999999998875 899999999999875332
Q ss_pred ccccccCCccccCCCcccccccCCeEEEEeCCCCCCCCCCCceeEEEecCccccccccCCcceeeee
Q 014952 345 MCLAFAKEPFEIKSGACGTVVRNAEMKIVDPDTGISLPRNQAGEICIRGAQIMKGTYHIYAPFLLSI 411 (415)
Q Consensus 345 ~~~~~~~~~~~~~~~~~G~p~~~~~v~i~d~~~~~~~~~g~~Gel~v~~~~~~~gY~~~~~~~~~~~ 411 (415)
.. ........++++|+|+++++++|.| + +++++.|+.|||+++||.++.||+++|+.+...|
T Consensus 296 ~~---~~~~~~~~~~~vG~p~~~~~~~i~~-~-~~~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~~ 357 (483)
T PRK03640 296 TL---SPEDALTKLGSAGKPLFPCELKIEK-D-GVVVPPFEEGEIVVKGPNVTKGYLNREDATRETF 357 (483)
T ss_pred cc---CcccccccCCCcccccCCcEEEEec-C-CCcCCCCCceEEEEECcchhhhhcCCHHHHHHHH
Confidence 22 1111234568899999999999998 4 4789999999999999999999999998876654
No 51
>PRK12582 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=2.6e-49 Score=396.31 Aligned_cols=373 Identities=20% Similarity=0.250 Sum_probs=290.6
Q ss_pred CCCCCHHhHHHhhhccCCCCcEEEeCCC--C--CeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHH
Q 014952 22 PNHLPLHTYCFENISQFADRPCIINGPT--G--DVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGA 97 (415)
Q Consensus 22 ~~~~tl~~~l~~~a~~~p~~~a~~~~~~--~--~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~ 97 (415)
+...|+.+.|.++++++|+++++++.+. + +.+||+||.++++++|++|.++|+++||+|+++++|++++++++|||
T Consensus 46 ~~~~~l~~~l~~~a~~~pd~~a~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~~~~lA~ 125 (624)
T PRK12582 46 PYPRSIPHLLAKWAAEAPDRPWLAQREPGHGQWRKVTYGEAKRAVDALAQALLDLGLDPGRPVMILSGNSIEHALMTLAA 125 (624)
T ss_pred CcccCHHHHHHHHHHHCCCchheecccCCCCceEEeEHHHHHHHHHHHHHHHHHcCCCCCCEEEEecCCCHHHHHHHHHH
Confidence 3457999999999999999999987531 1 68999999999999999999999999999999999999999999999
Q ss_pred HHhCCeEeecCCCCCH-----HHHHHHHHhcCceEEEEcccc-hHHHHhhhhhcCceEEEeCCCCC--Cccchhhhhhhc
Q 014952 98 SYIGATSTTANPFYTP-----PEIAKQAIASKAKIIITQAVY-NDKVRDLSEHHGARIVTIDPPPE--NCLHFSELITQA 169 (415)
Q Consensus 98 ~~~G~~~v~l~~~~~~-----~~~~~~l~~~~~~~vl~~~~~-~~~~~~~~~~~~~~~i~~~~~~~--~~~~~~~l~~~~ 169 (415)
+++|++++|++|.++. +++.+++++++++++|+++.. .............+++.++.... ....++++....
T Consensus 126 ~~~G~v~vpl~p~~~~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 205 (624)
T PRK12582 126 MQAGVPAAPVSPAYSLMSHDHAKLKHLFDLVKPRVVFAQSGAPFARALAALDLLDVTVVHVTGPGEGIASIAFADLAATP 205 (624)
T ss_pred HHcCCeEeeccCccccccCCHHHHHHHHHhcCCcEEEecCHHHHHHHHHhhhhcCceEEEEcCCCcccccccHHHHhhcC
Confidence 9999999999999875 899999999999999998642 12211211112345555543221 233455552221
Q ss_pred ccCCC--CcccCCCCCeEEEecCCCCCCCCceeeechHHHHHHHhhhhcCCCCCccCC---CCcEEEEccchHHHHhhHH
Q 014952 170 DENEI--PAVKINPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLH---KEDVILCVLPLFHIYSLNS 244 (415)
Q Consensus 170 ~~~~~--~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~---~~~~~~~~~pl~~~~g~~~ 244 (415)
..... ......++++++|+|||||||.||+|+++|+++..+........ ... ..++.+.++|++|.+++..
T Consensus 206 ~~~~~~~~~~~~~~~d~a~i~yTSGTTG~PKgV~~th~~l~~~~~~~~~~~----~~~~~~~~~~~l~~lPl~h~~g~~~ 281 (624)
T PRK12582 206 PTAAVAAAIAAITPDTVAKYLFTSGSTGMPKAVINTQRMMCANIAMQEQLR----PREPDPPPPVSLDWMPWNHTMGGNA 281 (624)
T ss_pred CcchhhhhhccCCCCceEEEEEcCCCCCCCceEEeeHHHHHHHHHHHHHhc----cccCCCCCceEEEechHHHHHhHHH
Confidence 11101 11234578999999999999999999999999988766554321 222 2579999999999999876
Q ss_pred HHHHHHHcCcEEEEcCC-CCH---HHHHHHHHhcCceeeecchHHHHHHHcCCCCC----CCCcccceeeeecCCCCCHH
Q 014952 245 VLLCALRVGAAILIMQK-FDI---VKLMELVQKYKVTVAPFVPPIVLAVAKSGDVD----KYDMSSIRTVMSGAAPMGKE 316 (415)
Q Consensus 245 ~~l~~l~~G~~~v~~~~-~~~---~~~~~~l~~~~~t~l~~~p~~l~~l~~~~~~~----~~~l~~lr~v~~gG~~l~~~ 316 (415)
.++.++..|+++++.+. +++ ..+++.++++++|++.++|.++..|.+..... ...+++||.+++||++++++
T Consensus 282 ~~~~~l~~G~tvvl~~~~~~~~~~~~~~~~i~~~~~t~~~~vP~~~~~l~~~~~~~~~~~~~~~~slr~i~~gGa~l~~~ 361 (624)
T PRK12582 282 NFNGLLWGGGTLYIDDGKPLPGMFEETIRNLREISPTVYGNVPAGYAMLAEAMEKDDALRRSFFKNLRLMAYGGATLSDD 361 (624)
T ss_pred HHHHHHhCceEEEEcCCCcccchHHHHHHHHHhcCCeEEeccCHHHHHHHHHHhhCHHHHHHHhhheeEEEecCCCCCHH
Confidence 67788999999998763 333 45677889999999999999998887543221 23468999999999999999
Q ss_pred HHHHHHhh----CC-CCccccccccccCCccccccccccCCccccCCCcccccccCCeEEEEeCCCCCCCCCCCceeEEE
Q 014952 317 LEDAVRAK----LP-HAKLGQGYGMTEAGPVLSMCLAFAKEPFEIKSGACGTVVRNAEMKIVDPDTGISLPRNQAGEICI 391 (415)
Q Consensus 317 ~~~~~~~~----~~-~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~G~p~~~~~v~i~d~~~~~~~~~g~~Gel~v 391 (415)
+.+++.+. ++ +..+++.||+||++++.... .......+++|+|+||++++|++ .|+.|||+|
T Consensus 362 ~~~~~~~~~~~~~g~~~~l~~~YG~TE~~~~~~~~-----~~~~~~~~svG~p~pg~~v~i~~--------~G~~GEl~v 428 (624)
T PRK12582 362 LYERMQALAVRTTGHRIPFYTGYGATETAPTTTGT-----HWDTERVGLIGLPLPGVELKLAP--------VGDKYEVRV 428 (624)
T ss_pred HHHHHHHHHHhhcCCCceEEeccccccccceeecc-----cCCCCCCCCCCcCCCCcEEEEcc--------CCCceEEEE
Confidence 99999986 32 36799999999998654422 11234568999999999999964 377899999
Q ss_pred ecCccccccccCCcceeeee
Q 014952 392 RGAQIMKGTYHIYAPFLLSI 411 (415)
Q Consensus 392 ~~~~~~~gY~~~~~~~~~~~ 411 (415)
+||+++.|||++|+++...|
T Consensus 429 rg~~v~~GY~~~p~~t~~~f 448 (624)
T PRK12582 429 KGPNVTPGYHKDPELTAAAF 448 (624)
T ss_pred ECCcccccccCCccchhhhc
Confidence 99999999999999988776
No 52
>PRK10946 entE enterobactin synthase subunit E; Provisional
Probab=100.00 E-value=6e-49 Score=387.54 Aligned_cols=395 Identities=21% Similarity=0.301 Sum_probs=316.4
Q ss_pred CccccccccceeecCCCCCCCCCCCCHHhHHHhhhccCCCCcEEEeCCCCCeeeHHHHHHHHHHHHHHHHHcCCCCCCEE
Q 014952 1 MEAKQDHQEFIFRSKLPDIYIPNHLPLHTYCFENISQFADRPCIINGPTGDVYTYADVELTSRKVAAGLSKLGVQKGDVI 80 (415)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~tl~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V 80 (415)
|+.|+..|.+.+...++.--.....++.+.|.++++ |+++|+++. ++.+||+||.++++++|+.|.++|+++|++|
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~--p~~~a~~~~--~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V 76 (536)
T PRK10946 1 MSIPFTRWPEEFARRYREKGYWQDLPLTDILTRHAA--SDAIAVICG--ERQFSYRELNQASDNLACSLRRQGIKPGDTA 76 (536)
T ss_pred CCCccccChhhhhheeeecceecCccHHHHHHHhhC--CCCeEEEeC--CCcccHHHHHHHHHHHHHHHHHcCCCCCCEE
Confidence 677776666655554444433446899999999887 999999987 7899999999999999999999999999999
Q ss_pred EEEcCCchhHHHHHHHHHHhCCeEeecCCCCCHHHHHHHHHhcCceEEEEcccch-----HHHHhhhhh-cCceEEEeCC
Q 014952 81 MLLLQNCPQFVFAFLGASYIGATSTTANPFYTPPEIAKQAIASKAKIIITQAVYN-----DKVRDLSEH-HGARIVTIDP 154 (415)
Q Consensus 81 ~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~vl~~~~~~-----~~~~~~~~~-~~~~~i~~~~ 154 (415)
+++++|+.+++++++||+++|++++++.+.....++..+++.+++++++++.+.. ......... ...+.+.+..
T Consensus 77 ~v~~~n~~~~~~~~la~~~~G~v~v~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 156 (536)
T PRK10946 77 LVQLGNVAEFYITFFALLKLGVAPVNALFSHQRSELNAYASQIEPALLIADRQHALFSDDDFLNTLVAEHSSLRVVLLLN 156 (536)
T ss_pred EEECCChHHHHHHHHHHHHcCeEEecCCccccHHHHHHHHhhcCCCEEEEeccccccchHHHHHHHHhhCCCceEEEEec
Confidence 9999999999999999999999888777777788899999999999999986531 112222221 1233333332
Q ss_pred CCCCccchhhhhhhcccCCCCcccCCCCCeEEEecCCCCCCCCceeeechHHHHHHHhhhhcCCCCCccCCCCcEEEEcc
Q 014952 155 PPENCLHFSELITQADENEIPAVKINPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVL 234 (415)
Q Consensus 155 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (415)
. .....+++++.. .....+.....++++++++|||||||.||+|.++|+++...+..... .+.+.+++++++.+
T Consensus 157 ~-~~~~~~~~~~~~-~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~s~~~l~~~~~~~~~----~~~~~~~~~~l~~~ 230 (536)
T PRK10946 157 D-DGEHSLDDAINH-PAEDFTATPSPADEVAFFQLSGGSTGTPKLIPRTHNDYYYSVRRSVE----ICGFTPQTRYLCAL 230 (536)
T ss_pred C-CCCccHHHHhhC-cccccccCCCCCCCeEEEEeCCCCCCCCcEEEEehHHHHHHHHHHHH----hcCCCCCceEEEec
Confidence 2 223344444222 22222234456789999999999999999999999999998877665 44578899999999
Q ss_pred chHHHHhhHH-HHHHHHHcCcEEEEcCCCCHHHHHHHHHhcCceeeecchHHHHHHHcC--CCCCCCCcccceeeeecCC
Q 014952 235 PLFHIYSLNS-VLLCALRVGAAILIMQKFDIVKLMELVQKYKVTVAPFVPPIVLAVAKS--GDVDKYDMSSIRTVMSGAA 311 (415)
Q Consensus 235 pl~~~~g~~~-~~l~~l~~G~~~v~~~~~~~~~~~~~l~~~~~t~l~~~p~~l~~l~~~--~~~~~~~l~~lr~v~~gG~ 311 (415)
|++|.+++.. .++.++..|+++++.+.+++..+++.++++++|++.++|.++..+++. .......++++|.+++||+
T Consensus 231 p~~h~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~~l~~v~~gg~ 310 (536)
T PRK10946 231 PAAHNYPMSSPGALGVFLAGGTVVLAPDPSATLCFPLIEKHQVNVTALVPPAVSLWLQAIAEGGSRAQLASLKLLQVGGA 310 (536)
T ss_pred CccccccchhhhHHHHhhcCcEEEECCCCCHHHHHHHHHHhCCcEEEeChHHHHHHHhhhcccCccccccceeEEEECCC
Confidence 9999888753 467889999999999888999999999999999999999999998875 2233456789999999999
Q ss_pred CCCHHHHHHHHhhCCCCccccccccccCCccccccccccCCccccCCCcccccc-cCCeEEEEeCCCCCCCCCCCceeEE
Q 014952 312 PMGKELEDAVRAKLPHAKLGQGYGMTEAGPVLSMCLAFAKEPFEIKSGACGTVV-RNAEMKIVDPDTGISLPRNQAGEIC 390 (415)
Q Consensus 312 ~l~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~G~p~-~~~~v~i~d~~~~~~~~~g~~Gel~ 390 (415)
++++++.+++.+.+ ++++++.||+||++... .. .+.......+++|+|+ |++.++|+| +++++++.|+.|||+
T Consensus 311 ~l~~~~~~~~~~~~-g~~~~~~YG~tE~~~~~-~~---~~~~~~~~~~~~G~p~~~~~~v~i~d-~~~~~~~~g~~Gel~ 384 (536)
T PRK10946 311 RLSETLARRIPAEL-GCQLQQVFGMAEGLVNY-TR---LDDSDERIFTTQGRPMSPDDEVWVAD-ADGNPLPQGEVGRLM 384 (536)
T ss_pred CCCHHHHHHHHHhc-CCeEEEeecccccceee-ec---CCCccccccccCCcccCCCceEEEEC-CCCCCCCCCCccEEE
Confidence 99999999999999 89999999999965322 11 1122234567899999 899999999 568999999999999
Q ss_pred EecCccccccccCCcceeeee
Q 014952 391 IRGAQIMKGTYHIYAPFLLSI 411 (415)
Q Consensus 391 v~~~~~~~gY~~~~~~~~~~~ 411 (415)
++|+.++.|||++++.+...|
T Consensus 385 v~g~~~~~GY~~~~~~t~~~~ 405 (536)
T PRK10946 385 TRGPYTFRGYYKSPQHNASAF 405 (536)
T ss_pred EecCccchhhcCCcccchhhc
Confidence 999999999999999887766
No 53
>PRK06087 short chain acyl-CoA synthetase; Reviewed
Probab=100.00 E-value=1.3e-48 Score=386.63 Aligned_cols=377 Identities=23% Similarity=0.364 Sum_probs=308.8
Q ss_pred CCCCHHhHHHhhhccCCCCcEEEeCCCCCeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHHhCC
Q 014952 23 NHLPLHTYCFENISQFADRPCIINGPTGDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGA 102 (415)
Q Consensus 23 ~~~tl~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~ 102 (415)
...|+.++|.+.++++|+++++++. +++.+||+||.++++++|++|++.|+++||+|+++++|+.+++++++||+++|+
T Consensus 21 ~~~~l~~~~~~~~~~~pd~~a~~~~-~~~~~Ty~~l~~~v~~la~~l~~~G~~~gd~V~i~~~n~~~~~~~~lA~~~~G~ 99 (547)
T PRK06087 21 GDASLADYWQQTARAMPDKIAVVDN-HGASYTYSALDHAASRLANWLLAKGIEPGDRVAFQLPGWCEFTIIYLACLKVGA 99 (547)
T ss_pred CCCCHHHHHHHHHHHCCCceEEEcC-CCCEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHcCc
Confidence 3578999999999999999999975 357999999999999999999999999999999999999999999999999999
Q ss_pred eEeecCCCCCHHHHHHHHHhcCceEEEEcccc-----hHHHHhhhhhc-Cc-eEEEeCCCC--CCccchhhhhhhcccCC
Q 014952 103 TSTTANPFYTPPEIAKQAIASKAKIIITQAVY-----NDKVRDLSEHH-GA-RIVTIDPPP--ENCLHFSELITQADENE 173 (415)
Q Consensus 103 ~~v~l~~~~~~~~~~~~l~~~~~~~vl~~~~~-----~~~~~~~~~~~-~~-~~i~~~~~~--~~~~~~~~l~~~~~~~~ 173 (415)
+++|+++.++.+++..+++.+++++++++... .+.+....... .. .++.++... .....++++..... ..
T Consensus 100 ~~v~l~~~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 178 (547)
T PRK06087 100 VSVPLLPSWREAELVWVLNKCQAKMFFAPTLFKQTRPVDLILPLQNQLPQLQQIVGVDKLAPATSSLSLSQIIADYE-PL 178 (547)
T ss_pred EEeccchhcCHHHHHHHHHhcCCeEEEEecccccccHHHHHHHHHhhCCCCcEEEEeCCcCCCcCccCHHHHhccCC-cc
Confidence 99999999999999999999999999997532 22222222221 12 344444321 12234444422211 11
Q ss_pred CCcccCCCCCeEEEecCCCCCCCCceeeechHHHHHHHhhhhcCCCCCccCCCCcEEEEccchHHHHhhHHHHHHHHHcC
Q 014952 174 IPAVKINPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVG 253 (415)
Q Consensus 174 ~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~l~~l~~G 253 (415)
........+++++|+|||||||.||+|.++|.++......... .+.+.++++++...|++|.+++...++.++..|
T Consensus 179 ~~~~~~~~~d~a~i~~TSGTTG~PK~v~~t~~~l~~~~~~~~~----~~~~~~~d~~l~~~pl~h~~g~~~~~~~~l~~g 254 (547)
T PRK06087 179 TTAITTHGDELAAVLFTSGTEGLPKGVMLTHNNILASERAYCA----RLNLTWQDVFMMPAPLGHATGFLHGVTAPFLIG 254 (547)
T ss_pred cCCCCCCCCCeEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHH----hcCCCCCCeEEEecchHHHHHHHHHHHHHHhcC
Confidence 1223456789999999999999999999999999887766555 445788999999999999999887888999999
Q ss_pred cEEEEcCCCCHHHHHHHHHhcCceeeecchHHHHHHHcCCCCCCCCcccceeeeecCCCCCHHHHHHHHhhCCCCccccc
Q 014952 254 AAILIMQKFDIVKLMELVQKYKVTVAPFVPPIVLAVAKSGDVDKYDMSSIRTVMSGAAPMGKELEDAVRAKLPHAKLGQG 333 (415)
Q Consensus 254 ~~~v~~~~~~~~~~~~~l~~~~~t~l~~~p~~l~~l~~~~~~~~~~l~~lr~v~~gG~~l~~~~~~~~~~~~~~~~~~~~ 333 (415)
+++++.+.+++..+++.++++++++++++|+.+..+++.......+++++|.+++||+++++++.+.+.+. ++++++.
T Consensus 255 ~~~~~~~~~~~~~~~~~i~~~~~t~~~~~~~~~~~~l~~~~~~~~~~~~lr~i~~gG~~~~~~~~~~~~~~--~~~l~~~ 332 (547)
T PRK06087 255 ARSVLLDIFTPDACLALLEQQRCTCMLGATPFIYDLLNLLEKQPADLSALRFFLCGGTTIPKKVARECQQR--GIKLLSV 332 (547)
T ss_pred CEEEecCCCCHHHHHHHHHHcCCCEEeccHHHHHHHHhccccCCCCCCCeEEEEEcCCCCCHHHHHHHHHc--CCcEEEE
Confidence 99999999999999999999999999999888888877655556678999999999999999999988764 8999999
Q ss_pred cccccCCccccccccccCCccccCCCcccccccCCeEEEEeCCCCCCCCCCCceeEEEecCccccccccCCcceeeee
Q 014952 334 YGMTEAGPVLSMCLAFAKEPFEIKSGACGTVVRNAEMKIVDPDTGISLPRNQAGEICIRGAQIMKGTYHIYAPFLLSI 411 (415)
Q Consensus 334 YG~tE~~~~~~~~~~~~~~~~~~~~~~~G~p~~~~~v~i~d~~~~~~~~~g~~Gel~v~~~~~~~gY~~~~~~~~~~~ 411 (415)
||+||++++..... .........++|+|++++.++|+| +++++++.|+.|||+++|+.++.||+++++.+...|
T Consensus 333 YG~TE~~~~~~~~~---~~~~~~~~~~~G~~~~~~~~~i~d-~~~~~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~~ 406 (547)
T PRK06087 333 YGSTESSPHAVVNL---DDPLSRFMHTDGYAAAGVEIKVVD-EARKTLPPGCEGEEASRGPNVFMGYLDEPELTARAL 406 (547)
T ss_pred ecccccCCccccCC---CcchhhcCCcCCccCCCceEEEEc-CCCCCCcCCCcceEEEecccccccccCCHHHHHHHh
Confidence 99999987654331 111123346789999999999999 568999999999999999999999999998865544
No 54
>PRK07638 acyl-CoA synthetase; Validated
Probab=100.00 E-value=6.6e-49 Score=383.28 Aligned_cols=356 Identities=21% Similarity=0.296 Sum_probs=296.1
Q ss_pred CCHHhHHHhhhccCCCCcEEEeCCCCCeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHHhCCeE
Q 014952 25 LPLHTYCFENISQFADRPCIINGPTGDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGATS 104 (415)
Q Consensus 25 ~tl~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~ 104 (415)
|++.+.|.++++++|+++|+++. +..+||.||.++++++|+.|.+.|. +|++|+|+++|+.++++++|||+++|+++
T Consensus 1 ~~~~~~~~~~a~~~p~~~a~~~~--~~~~Ty~~l~~~~~~~a~~L~~~~~-~~~~v~i~~~~~~~~~~~~la~~~~G~~~ 77 (487)
T PRK07638 1 MGITKEYKKHASLQPNKIAIKEN--DRVLTYKDWFESVCKVANWLNEKES-KNKTIAILLENRIEFLQLFAGAAMAGWTC 77 (487)
T ss_pred CChHHHHHHHHHhCCCCeEEecC--CcEeeHHHHHHHHHHHHHHHHHhCC-CCCEEEEEcCCCHHHHHHHHHHHHcCeEE
Confidence 57889999999999999999987 7899999999999999999999884 89999999999999999999999999999
Q ss_pred eecCCCCCHHHHHHHHHhcCceEEEEcccchHHHHhhhhhcCceEEEeCCCCCCccchhhhhhhcccCCCCcccCCCCCe
Q 014952 105 TTANPFYTPPEIAKQAIASKAKIIITQAVYNDKVRDLSEHHGARIVTIDPPPENCLHFSELITQADENEIPAVKINPDDV 184 (415)
Q Consensus 105 v~l~~~~~~~~~~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 184 (415)
+|+++.++.+++.+++..+++++++++......+... ..+++.++. +.+.... ............+++
T Consensus 78 v~l~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~----~~~~~~~~~-------~~~~~~~-~~~~~~~~~~~~~~~ 145 (487)
T PRK07638 78 VPLDIKWKQDELKERLAISNADMIVTERYKLNDLPDE----EGRVIEIDE-------WKRMIEK-YLPTYAPIENVQNAP 145 (487)
T ss_pred EecCccCCHHHHHHHHHhCCCCEEEEecccccchhhc----cceEEEehh-------hhhhhhh-ccccccccccCCCCc
Confidence 9999999999999999999999999998655444321 233333321 1111111 111111122234678
Q ss_pred EEEecCCCCCCCCceeeechHHHHHHHhhhhcCCCCCccCCCCcEEEEccchHHHHhhHHHHHHHHHcCcEEEEcCCCCH
Q 014952 185 VALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIMQKFDI 264 (415)
Q Consensus 185 a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~l~~l~~G~~~v~~~~~~~ 264 (415)
++|+|||||||.||+|.++|++++.++..... .+...++|+++...|++|..++. .++.++..|+++++.+.+++
T Consensus 146 a~i~~TSGtTG~PKgv~~s~~~~~~~~~~~~~----~~~~~~~d~~~~~~~l~~~~~l~-~~~~~l~~g~~~~~~~~~~~ 220 (487)
T PRK07638 146 FYMGFTSGSTGKPKAFLRAQQSWLHSFDCNVH----DFHMKREDSVLIAGTLVHSLFLY-GAISTLYVGQTVHLMRKFIP 220 (487)
T ss_pred EEEEeCCCCCCCCcEEEEecHHHHHHHHHHHH----hcCcCCCCEEEEeecchHHHHHH-HHHHHHccCcEEEEcCCCCH
Confidence 99999999999999999999999888776665 44578899999999999988765 67889999999999998999
Q ss_pred HHHHHHHHhcCceeeecchHHHHHHHcCCCCCCCCcccceeeeecCCCCCHHHHHHHHhhCCCCccccccccccCCcccc
Q 014952 265 VKLMELVQKYKVTVAPFVPPIVLAVAKSGDVDKYDMSSIRTVMSGAAPMGKELEDAVRAKLPHAKLGQGYGMTEAGPVLS 344 (415)
Q Consensus 265 ~~~~~~l~~~~~t~l~~~p~~l~~l~~~~~~~~~~l~~lr~v~~gG~~l~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~ 344 (415)
..+++.++++++|++.++|+++..|.+... . ..+.+.++++|++++.+..+++.+.||+.++++.||+||++.+..
T Consensus 221 ~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~---~-~~~~~~~~~~G~~l~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~ 296 (487)
T PRK07638 221 NQVLDKLETENISVMYTVPTMLESLYKENR---V-IENKMKIISSGAKWEAEAKEKIKNIFPYAKLYEFYGASELSFVTA 296 (487)
T ss_pred HHHHHHHHHcCCeEEEeCcHHHHHHHhCcC---c-CCceeEEEEcCCCCCHHHHHHHHHHcCCCeEEEEecCCccCceEE
Confidence 999999999999999999999999987632 2 345566778899999999999999998899999999999996544
Q ss_pred ccccccCCccccCCCcccccccCCeEEEEeCCCCCCCCCCCceeEEEecCccccccccCCcceee
Q 014952 345 MCLAFAKEPFEIKSGACGTVVRNAEMKIVDPDTGISLPRNQAGEICIRGAQIMKGTYHIYAPFLL 409 (415)
Q Consensus 345 ~~~~~~~~~~~~~~~~~G~p~~~~~v~i~d~~~~~~~~~g~~Gel~v~~~~~~~gY~~~~~~~~~ 409 (415)
.+. ........++|+|+++++++|+| ++|++++.|+.|||+|+|+.++.||+++++.+.+
T Consensus 297 ~~~----~~~~~~~~~~G~~~~~~~~~i~d-~~g~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~ 356 (487)
T PRK07638 297 LVD----EESERRPNSVGRPFHNVQVRICN-EAGEEVQKGEIGTVYVKSPQFFMGYIIGGVLARE 356 (487)
T ss_pred ecc----cccCCCCCCCCcccCCcEEEEEC-CCCCCCCCCCCeEEEEecccceeeecCCHHHHhh
Confidence 331 22234567899999999999999 5599999999999999999999999999865443
No 55
>PRK12492 long-chain-fatty-acid--CoA ligase; Provisional
Probab=100.00 E-value=1.8e-48 Score=386.29 Aligned_cols=395 Identities=25% Similarity=0.400 Sum_probs=310.1
Q ss_pred cceeecCCCCCCCCC-----CCCHHhHHHhhhccCCCCcEEEeCCCCCeeeHHHHHHHHHHHHHHHHHc-CCCCCCEEEE
Q 014952 9 EFIFRSKLPDIYIPN-----HLPLHTYCFENISQFADRPCIINGPTGDVYTYADVELTSRKVAAGLSKL-GVQKGDVIML 82 (415)
Q Consensus 9 ~~~~~~~~~~~~~~~-----~~tl~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~~a~~L~~~-g~~~g~~V~i 82 (415)
...|+.+.++.+.++ ..|+.+.|.+.++++|+++|+++. ++.+||.||.++++++|+.|.+. |+++||+|++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~a~~~~--~~~~Ty~~l~~~~~~~a~~L~~~~gi~~gd~V~i 80 (562)
T PRK12492 3 PDFWNDKRPAGVPSTIDLAAYKSVVEVFERSCKKFADRPAFSNL--GVTLSYAELERHSAAFAAYLQQHTDLVPGDRIAV 80 (562)
T ss_pred CchhhhcCCCCCCCcccccccCcHHHHHHHHHHhCCCCeeEecC--CceeeHHHHHHHHHHHHHHHHHhcCCCCCCEEEE
Confidence 346887766654332 268999999999999999999976 78999999999999999999985 9999999999
Q ss_pred EcCCchhHHHHHHHHHHhCCeEeecCCCCCHHHHHHHHHhcCceEEEEcccchHHHHhhhhhcCce-EEEeC--C-----
Q 014952 83 LLQNCPQFVFAFLGASYIGATSTTANPFYTPPEIAKQAIASKAKIIITQAVYNDKVRDLSEHHGAR-IVTID--P----- 154 (415)
Q Consensus 83 ~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~-~i~~~--~----- 154 (415)
+++|+++++++++||+++|++++++++.++.+++.+++.++++++++++....+............ ++... +
T Consensus 81 ~~~n~~e~~~~~la~~~~G~v~v~~~~~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (562)
T PRK12492 81 QMPNVLQYPIAVFGALRAGLIVVNTNPLYTAREMRHQFKDSGARALVYLNMFGKLVQEVLPDTGIEYLIEAKMGDLLPAA 160 (562)
T ss_pred ECCCCHHHHHHHHHHHHcCeEEeccCccCCHHHHHHHHhccCceEEEeccccchHHHHhhhccCceEEEeechhhccccc
Confidence 999999999999999999999999999999999999999999999999876544443322111111 11000 0
Q ss_pred -------------------CCCCccchhhhhhhcccCCCCcccCCCCCeEEEecCCCCCCCCceeeechHHHHHHHhhhh
Q 014952 155 -------------------PPENCLHFSELITQADENEIPAVKINPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQV 215 (415)
Q Consensus 155 -------------------~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~ 215 (415)
.......++++................+++++|+|||||||.||+|.++|+++........
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~l~~~~~~~~ 240 (562)
T PRK12492 161 KGWLVNTVVDKVKKMVPAYHLPQAVPFKQALRQGRGLSLKPVPVGLDDIAVLQYTGGTTGLAKGAMLTHGNLVANMLQVR 240 (562)
T ss_pred cchhcccccccccccccccCCcccccHHHHHhccCCCCCCCCCCCcCCeEEEEeCCCCCCCCceEEEechhHHHHHHHHH
Confidence 0001122333322211111122345668999999999999999999999999987665544
Q ss_pred cCCCCC-----ccCCC-CcEEEEccchHHHHhhHHHHHHHHHcCcEEEEcC-CCCHHHHHHHHHhcCceeeecchHHHHH
Q 014952 216 DGENPN-----LYLHK-EDVILCVLPLFHIYSLNSVLLCALRVGAAILIMQ-KFDIVKLMELVQKYKVTVAPFVPPIVLA 288 (415)
Q Consensus 216 ~~~~~~-----~~~~~-~~~~~~~~pl~~~~g~~~~~l~~l~~G~~~v~~~-~~~~~~~~~~l~~~~~t~l~~~p~~l~~ 288 (415)
..+... ..+.. .++++..+|++|.+++....+..+..|...++.. ++++..+++.++++++|++.++|.++..
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~ 320 (562)
T PRK12492 241 ACLSQLGPDGQPLMKEGQEVMIAPLPLYHIYAFTANCMCMMVSGNHNVLITNPRDIPGFIKELGKWRFSALLGLNTLFVA 320 (562)
T ss_pred HHHhcccccccccccCCCeEEEEecchHHHHHHHHHHHHHhhcCceEEEecCCcCHHHHHHHHHHhCCceeeCcHHHHHH
Confidence 322100 00222 3577899999999998766677788888777654 4689999999999999999999999999
Q ss_pred HHcCCCCCCCCcccceeeeecCCCCCHHHHHHHHhhCCCCccccccccccCCccccccccccCCccccCCCcccccccCC
Q 014952 289 VAKSGDVDKYDMSSIRTVMSGAAPMGKELEDAVRAKLPHAKLGQGYGMTEAGPVLSMCLAFAKEPFEIKSGACGTVVRNA 368 (415)
Q Consensus 289 l~~~~~~~~~~l~~lr~v~~gG~~l~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~G~p~~~~ 368 (415)
+.+.+.....+++++|.+++||++++.++.+++.+.+ ++++++.||+||++++++.+. .......+++|+|++++
T Consensus 321 l~~~~~~~~~~~~~lr~~~~gG~~~~~~~~~~~~~~~-~~~~~~~YG~tE~~~~~~~~~----~~~~~~~~~~G~p~~~~ 395 (562)
T PRK12492 321 LMDHPGFKDLDFSALKLTNSGGTALVKATAERWEQLT-GCTIVEGYGLTETSPVASTNP----YGELARLGTVGIPVPGT 395 (562)
T ss_pred HHhCcCcccccccceeEEEeccccCCHHHHHHHHHHh-CCceeeccCccccCceeeecC----CcccccCCccceecCCC
Confidence 9988766667789999999999999999999999988 899999999999987554431 11123457899999999
Q ss_pred eEEEEeCCCCCCCCCCCceeEEEecCccccccccCCcceeeee
Q 014952 369 EMKIVDPDTGISLPRNQAGEICIRGAQIMKGTYHIYAPFLLSI 411 (415)
Q Consensus 369 ~v~i~d~~~~~~~~~g~~Gel~v~~~~~~~gY~~~~~~~~~~~ 411 (415)
+++|+|+ ++++++.|+.|||+|+|+.++.|||++|+.+...|
T Consensus 396 ~v~ivd~-~~~~~~~g~~Gel~v~g~~~~~gY~~~~~~t~~~~ 437 (562)
T PRK12492 396 ALKVIDD-DGNELPLGERGELCIKGPQVMKGYWQQPEATAEAL 437 (562)
T ss_pred EEEEECC-CCCCCCCCCceEEEEeCCccccccccCchhhhhcc
Confidence 9999995 58999999999999999999999999999988776
No 56
>PRK07769 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=2.7e-49 Score=397.11 Aligned_cols=376 Identities=22% Similarity=0.290 Sum_probs=296.4
Q ss_pred CCCCCCCHHhHHHhhhccCCCCcEEEeCC-------CCCeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHH
Q 014952 20 YIPNHLPLHTYCFENISQFADRPCIINGP-------TGDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVF 92 (415)
Q Consensus 20 ~~~~~~tl~~~l~~~a~~~p~~~a~~~~~-------~~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~ 92 (415)
..+++.|+.+.|.++++.+|+++|+++.+ ..+.+||+||.++++++|++|.+. +++||+|+++++|++++++
T Consensus 16 ~~~~~~~l~~~l~~~a~~~~~~~a~~~~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~~-~~~gd~V~i~~~n~~e~~~ 94 (631)
T PRK07769 16 RFPPNTNLVRHVERWAKVRGDKLAYRFLDFSTERDGVARDLTWSQFGARNRAVGARLQQV-TKPGDRVAILAPQNLDYLI 94 (631)
T ss_pred cccccCCHHHHHHHHHHhCCCCeEEEEeccCCCCCCceeEeeHHHHHHHHHHHHHHHHHh-cCCCCEEEEEcCCChHHHH
Confidence 45567899999999999999999998632 125899999999999999999987 8999999999999999999
Q ss_pred HHHHHHHhCCeEeec-CCCCC--HHHHHHHHHhcCceEEEEcccchHHHHhhhhhc----CceEEEeCCCCCCccchhhh
Q 014952 93 AFLGASYIGATSTTA-NPFYT--PPEIAKQAIASKAKIIITQAVYNDKVRDLSEHH----GARIVTIDPPPENCLHFSEL 165 (415)
Q Consensus 93 ~~lA~~~~G~~~v~l-~~~~~--~~~~~~~l~~~~~~~vl~~~~~~~~~~~~~~~~----~~~~i~~~~~~~~~~~~~~l 165 (415)
++|||+++|++++|+ ++..+ .+++.++++++++++++++.+..+.+....... ..+++.++.... .
T Consensus 95 ~~lA~~~~G~v~vpl~~~~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~ 167 (631)
T PRK07769 95 AFFGALYAGRIAVPLFDPAEPGHVGRLHAVLDDCTPSAILTTTDSAEGVRKFFRARPAKERPRVIAVDAVPD-------E 167 (631)
T ss_pred HHHHHHHcCCEEEeeCCCCccchHHHHHHHHHhCCCCEEEEChHHHHHHHHHHhhccccccceEEEcccccc-------c
Confidence 999999999999999 45554 578999999999999999887665544432211 123333332110 0
Q ss_pred hhhcccCCCCcccCCCCCeEEEecCCCCCCCCceeeechHHHHHHHhhhhcCCCCCccCCCCcEEEEccchHHHHhhHHH
Q 014952 166 ITQADENEIPAVKINPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSV 245 (415)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~ 245 (415)
...........++++++|+|||||||.||+|+++|+++......... .+.+.++++++..+|++|.+|+..
T Consensus 168 ----~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~----~~~~~~~d~~l~~~Pl~h~~gl~~- 238 (631)
T PRK07769 168 ----VGATWVPPEANEDTIAYLQYTSGSTRIPAGVQITHLNLPTNVLQVID----ALEGQEGDRGVSWLPFFHDMGLIT- 238 (631)
T ss_pred ----cccccCCCCCCCCCeEEEEeCCCCCCCCcEEEEcHHHHHHHHHHHHH----HcCCCCcceEEEeCCCcCchhhHH-
Confidence 00011112346789999999999999999999999999987776665 445778999999999999999985
Q ss_pred HHHHHHcCcEEEEcCC--C--CHHHHHHHHHhcCc---eeeecchHHHHHHHcC---CC--CCCCCcccceeeeecCCCC
Q 014952 246 LLCALRVGAAILIMQK--F--DIVKLMELVQKYKV---TVAPFVPPIVLAVAKS---GD--VDKYDMSSIRTVMSGAAPM 313 (415)
Q Consensus 246 ~l~~l~~G~~~v~~~~--~--~~~~~~~~l~~~~~---t~l~~~p~~l~~l~~~---~~--~~~~~l~~lr~v~~gG~~l 313 (415)
++.++..|+++++.++ + ++..+++.+.++++ +++.++|.++..+... +. ....+++++|.+++||+++
T Consensus 239 ~~~~~~~G~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~l~~lr~~~~gg~~l 318 (631)
T PRK07769 239 VLLPALLGHYITFMSPAAFVRRPGRWIRELARKPGGTGGTFSAAPNFAFEHAAARGLPKDGEPPLDLSNVKGLLNGSEPV 318 (631)
T ss_pred HHHHHhhCCeEEEEChHHHHhCHHHHHHHHHhhccccCceEeeCCchHHHHHHhhccchhcccCcchhheeeEEeccCCC
Confidence 5667778999888753 4 88999999999886 7889999988766542 11 1245789999999999999
Q ss_pred CHHHHHHHHhhCC-----CCccccccccccCCccccccccccCC----------------------ccccCCCccccccc
Q 014952 314 GKELEDAVRAKLP-----HAKLGQGYGMTEAGPVLSMCLAFAKE----------------------PFEIKSGACGTVVR 366 (415)
Q Consensus 314 ~~~~~~~~~~~~~-----~~~~~~~YG~tE~~~~~~~~~~~~~~----------------------~~~~~~~~~G~p~~ 366 (415)
++++.+++.+.|+ ...+++.||+||++.+++........ +......++|+|++
T Consensus 319 ~~~~~~~~~~~~~~~g~~~~~i~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~G~~~~ 398 (631)
T PRK07769 319 SPASMRKFNEAFAPYGLPPTAIKPSYGMAEATLFVSTTPMDEEPTVIYVDRDELNAGRFVEVPADAPNAVAQVSAGKVGV 398 (631)
T ss_pred CHHHHHHHHHHHhhcCCChhhcccccchhhheeEEeccCCCCCceEEEEcHHHHhCCCeEecCCCCCCceeEEeCCCcCC
Confidence 9999999999872 24599999999998655433211000 00112357999999
Q ss_pred CCeEEEEeCCCCCCCCCCCceeEEEecCccccccccCCcceeeeee
Q 014952 367 NAEMKIVDPDTGISLPRNQAGEICIRGAQIMKGTYHIYAPFLLSIV 412 (415)
Q Consensus 367 ~~~v~i~d~~~~~~~~~g~~Gel~v~~~~~~~gY~~~~~~~~~~~~ 412 (415)
+.+++|+|++++++++.|+.|||+|+||+++.|||++|+.+.++|.
T Consensus 399 ~~~~~ivd~~~g~~~~~ge~GEl~v~gp~v~~GY~~~~~~t~~~f~ 444 (631)
T PRK07769 399 SEWAVIVDPETASELPDGQIGEIWLHGNNIGTGYWGKPEETAATFQ 444 (631)
T ss_pred CcEEEEEcCCCCcCCCCCCEEEEEecCCCccccccCChhHHHHHHh
Confidence 9999999988899999999999999999999999999999887773
No 57
>TIGR03208 cyc_hxne_CoA_lg cyclohexanecarboxylate-CoA ligase. Members of this protein family are cyclohexanecarboxylate-CoA ligase. This enzyme prepares the aliphatic ring compound, cyclohexanecarboxylate, for dehydrogenation and then degradation by a pathway also used in benzoyl-CoA degradation in Rhodopseudomonas palustris.
Probab=100.00 E-value=2.1e-48 Score=384.09 Aligned_cols=374 Identities=24% Similarity=0.371 Sum_probs=305.3
Q ss_pred CCCHHhHHHhhhccCCCCcEEEeCC----CCCeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHH
Q 014952 24 HLPLHTYCFENISQFADRPCIINGP----TGDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASY 99 (415)
Q Consensus 24 ~~tl~~~l~~~a~~~p~~~a~~~~~----~~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~ 99 (415)
..|+.+.+.+.++.+|+++|++... .++.+||+||.++++++|+.|+++|+++||+|+++++|+.+++++++||++
T Consensus 21 ~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~~~~~Ty~eL~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~la~~~ 100 (538)
T TIGR03208 21 DRTINDHFDAAVANCPDKPALTAYRDGHGAVRRFSYRELDCRVDRIAVGLARLGVGRGDVVSFQLPNRWEFTALYLACAR 100 (538)
T ss_pred cCcHHHHHHHHHHHCCCceEEEeecccCCCcceecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHh
Confidence 4689999999999999999998521 246899999999999999999999999999999999999999999999999
Q ss_pred hCCeEeecCCCCCHHHHHHHHHhcCceEEEEcccch-----HHHHhhhhhcC--ceEEEeCCCCCCccchhhhhhhcccC
Q 014952 100 IGATSTTANPFYTPPEIAKQAIASKAKIIITQAVYN-----DKVRDLSEHHG--ARIVTIDPPPENCLHFSELITQADEN 172 (415)
Q Consensus 100 ~G~~~v~l~~~~~~~~~~~~l~~~~~~~vl~~~~~~-----~~~~~~~~~~~--~~~i~~~~~~~~~~~~~~l~~~~~~~ 172 (415)
+|++++|++|.++.+++.++++.++++++++++... ........... ..++..+.. ....+++++......
T Consensus 101 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 178 (538)
T TIGR03208 101 IGAVLNPLMPIFRERELSFMLNHADSKVFVVPSVFRGFDHAAMARELQSKLPALRQVVVIDGD--GDDSFDRVLMTPERD 178 (538)
T ss_pred cCEEEeccCcccCHHHHHHHHHhcCCeEEEEccccccccHHHHHHHHhccCCcceEEEEecCC--CCcCHHHHhhccccc
Confidence 999999999999999999999999999999987642 11222111111 234444321 112233332111000
Q ss_pred C-------CCcccCCCCCeEEEecCCCCCCCCceeeechHHHHHHHhhhhcCCCCCccCCCCcEEEEccchHHHHhhHHH
Q 014952 173 E-------IPAVKINPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSV 245 (415)
Q Consensus 173 ~-------~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~ 245 (415)
. .......++++++|+|||||||.||+|.++|+++...+..... .+.+..+++++..+|++|..++...
T Consensus 179 ~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~~~~~~~~~~~----~~~~~~~d~~l~~~pl~h~~g~~~~ 254 (538)
T TIGR03208 179 DTPDAAAILAGPRPSPDDVTQLIYTSGTTGEPKGVMHTANTLFSNIHPYAE----RLELGGGDVILMASPMAHQTGFMYG 254 (538)
T ss_pred cccccccccccCCCCCCCeEEEEECCCCCCCCcEEEeehHHHHHHHHHHHh----hcCCCCCCeEEEeCCchhHHHHHHH
Confidence 0 0112356789999999999999999999999999988877766 4457789999999999999998777
Q ss_pred HHHHHHcCcEEEEcCCCCHHHHHHHHHhcCceeeecchHHHHHHHcCCCCCCCCcccceeeeecCCCCCHHHHHHHHhhC
Q 014952 246 LLCALRVGAAILIMQKFDIVKLMELVQKYKVTVAPFVPPIVLAVAKSGDVDKYDMSSIRTVMSGAAPMGKELEDAVRAKL 325 (415)
Q Consensus 246 ~l~~l~~G~~~v~~~~~~~~~~~~~l~~~~~t~l~~~p~~l~~l~~~~~~~~~~l~~lr~v~~gG~~l~~~~~~~~~~~~ 325 (415)
++.++..|+++++.+.+++..+++.++++++|++.++|.++..+.+........++++|.+++||+++++++.+++.+.+
T Consensus 255 ~~~~l~~g~~~~~~~~~~~~~~~~~l~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~~l~~~~~gG~~~~~~~~~~~~~~~ 334 (538)
T TIGR03208 255 LMMPLILNATAVLQDIWNPARAAELIRETGVTFTMASTPFLTDLCRAVKESGAPVPSLFTFLCAGAPIPGILVERAWELL 334 (538)
T ss_pred HHHHHHcCCEEEecCccCHHHHHHHHHHhCCeEEecCHHHHHHHHhchhccCCCCCcceEEEEcCCCCCHHHHHHHHHHc
Confidence 88999999999999889999999999999999999999999988876544445678999999999999999999999998
Q ss_pred CCCccccccccccCCccccccccccCCccccCCCcccccccCCeEEEEeCCCCCCCCCCCceeEEEecCccccccccCCc
Q 014952 326 PHAKLGQGYGMTEAGPVLSMCLAFAKEPFEIKSGACGTVVRNAEMKIVDPDTGISLPRNQAGEICIRGAQIMKGTYHIYA 405 (415)
Q Consensus 326 ~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~G~p~~~~~v~i~d~~~~~~~~~g~~Gel~v~~~~~~~gY~~~~~ 405 (415)
++++++.||+||++++..... .........++|+|+|+++++|+| +++++++.|+.|||+++|+.++.||+++|+
T Consensus 335 -~~~~~~~YG~tE~~~~~~~~~---~~~~~~~~~~~G~~~~g~~v~i~~-~~~~~~~~g~~Gel~v~g~~~~~gy~~~~~ 409 (538)
T TIGR03208 335 -GALIVSAWGMTENGAVTVTEP---DDALEKASTTDGRPLPGVEVKVID-ANGAKLSQGETGRLLVRGCSNFGGYLKRPH 409 (538)
T ss_pred -CCeEEeeeccCcCCCccccCc---ccchhhccCcccccCCCCEEEEEC-CCCCCCcCCCCcEEEEecCcccccccCCcc
Confidence 789999999999986554331 111122345789999999999999 558999999999999999999999999998
Q ss_pred cee
Q 014952 406 PFL 408 (415)
Q Consensus 406 ~~~ 408 (415)
.+.
T Consensus 410 ~~~ 412 (538)
T TIGR03208 410 LNS 412 (538)
T ss_pred ccc
Confidence 753
No 58
>PRK06145 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.4e-48 Score=382.00 Aligned_cols=369 Identities=25% Similarity=0.350 Sum_probs=307.7
Q ss_pred CCHHhHHHhhhccCCCCcEEEeCCCCCeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHHhCCeE
Q 014952 25 LPLHTYCFENISQFADRPCIINGPTGDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGATS 104 (415)
Q Consensus 25 ~tl~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~ 104 (415)
+|+.+.+.++++.+|+++|+++. ++.+||.||.++++++|..|.+.|++++++|+++++|+.+++++++||+++|+++
T Consensus 2 ~~~~~~~~~~~~~~~~~~a~~~~--~~~~ty~el~~~v~~~a~~L~~~g~~~~~~v~i~~~~~~~~~~~~la~~~~G~~~ 79 (497)
T PRK06145 2 FNLSASIAFHARRTPDRAALVYR--DQEISYAEFHQRILQAAGMLHARGIGQGDVVALLMKNSAAFLELAFAASYLGAVF 79 (497)
T ss_pred ccHHHHHHHHHHHCCCceEEEEC--CcceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHhcCcEE
Confidence 57889999999999999999987 8899999999999999999999999999999999999999999999999999999
Q ss_pred eecCCCCCHHHHHHHHHhcCceEEEEcccchHHHHhhhhhcCceEEEeCCCCCCccchhhhhhhcccCCCCcccCCCCCe
Q 014952 105 TTANPFYTPPEIAKQAIASKAKIIITQAVYNDKVRDLSEHHGARIVTIDPPPENCLHFSELITQADENEIPAVKINPDDV 184 (415)
Q Consensus 105 v~l~~~~~~~~~~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 184 (415)
+|+++..+.+++..+++.+++++++++.+....... ....+.++..... ....+ ..............++++
T Consensus 80 v~l~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~~~-----~~~~~~~~~~~~~--~~~~~-~~~~~~~~~~~~~~~~~~ 151 (497)
T PRK06145 80 LPINYRLAADEVAYILGDAGAKLLLVDEEFDAIVAL-----ETPKIVIDAAAQA--DSRRL-AQGGLEIPPQAAVAPTDL 151 (497)
T ss_pred EecccccCHHHHHHHHHhcCCcEEEEccchhhhhhc-----ccceEEecCcccc--hhHHH-hccCCCCCCCCCCCccce
Confidence 999999999999999999999999998776543221 1122333321111 11111 111111112234567899
Q ss_pred EEEecCCCCCCCCceeeechHHHHHHHhhhhcCCCCCccCCCCcEEEEccchHHHHhhHHHHHHHHHcCcEEEEcCCCCH
Q 014952 185 VALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIMQKFDI 264 (415)
Q Consensus 185 a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~l~~l~~G~~~v~~~~~~~ 264 (415)
++++|||||||.||+|.++|+++......... .+.+..+++++...|++|.+++....+.++..|+++++.+.+++
T Consensus 152 a~i~~TSGTTG~PK~v~~s~~~~~~~~~~~~~----~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~g~~~~~~~~~~~ 227 (497)
T PRK06145 152 VRLMYTSGTTDRPKGVMHSYGNLHWKSIDHVI----ALGLTASERLLVVGPLYHVGAFDLPGIAVLWVGGTLRIHREFDP 227 (497)
T ss_pred EEEEeCCCCCCCCcEEEEecHHHHHHHHHHHH----hhCCCCCcEEEEecCchhHhHHHHHHHHHHhccCEEEECCcCCH
Confidence 99999999999999999999999876554444 34678899999999999999987666788999999999988999
Q ss_pred HHHHHHHHhcCceeeecchHHHHHHHcCCCCCCCCcccceeeeecCCCCCHHHHHHHHhhCCCCccccccccccCCcccc
Q 014952 265 VKLMELVQKYKVTVAPFVPPIVLAVAKSGDVDKYDMSSIRTVMSGAAPMGKELEDAVRAKLPHAKLGQGYGMTEAGPVLS 344 (415)
Q Consensus 265 ~~~~~~l~~~~~t~l~~~p~~l~~l~~~~~~~~~~l~~lr~v~~gG~~l~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~ 344 (415)
..+++.++++++|++.++|+++..++........+++++|.+++||++++.++.+++.+.|++.++++.||+||+++..+
T Consensus 228 ~~~~~~i~~~~~t~~~~~P~~~~~ll~~~~~~~~~~~~l~~~~~gG~~~~~~~~~~~~~~~~~~~v~~~YG~tE~~~~~~ 307 (497)
T PRK06145 228 EAVLAAIERHRLTCAWMAPVMLSRVLTVPDRDRFDLDSLAWCIGGGEKTPESRIRDFTRVFTRARYIDAYGLTETCSGDT 307 (497)
T ss_pred HHHHHHHHHhCCeEEEehHHHHHHHHcCCCccccccccceEEEecCCCCCHHHHHHHHHHcCCCceEEeecCcccCCcce
Confidence 99999999999999999999999999877666667889999999999999999999999998889999999999997544
Q ss_pred ccccccCCccccCCCcccccccCCeEEEEeCCCCCCCCCCCceeEEEecCccccccccCCcceeeee
Q 014952 345 MCLAFAKEPFEIKSGACGTVVRNAEMKIVDPDTGISLPRNQAGEICIRGAQIMKGTYHIYAPFLLSI 411 (415)
Q Consensus 345 ~~~~~~~~~~~~~~~~~G~p~~~~~v~i~d~~~~~~~~~g~~Gel~v~~~~~~~gY~~~~~~~~~~~ 411 (415)
... ........+++|+|+++++++|+|+ ++++++.|+.|||+++|++++.||+++++.+...|
T Consensus 308 ~~~---~~~~~~~~~~~G~~~~~~~~~i~~~-~~~~~~~~~~Gel~v~g~~~~~Gy~~~~~~~~~~~ 370 (497)
T PRK06145 308 LME---AGREIEKIGSTGRALAHVEIRIADG-AGRWLPPNMKGEICMRGPKVTKGYWKDPEKTAEAF 370 (497)
T ss_pred ecc---CccccccCCCcccCCCCceEEEECC-CCCCCCCCCceEEEEECcchhhhhcCChHHHHHHH
Confidence 321 1112234578999999999999994 58999999999999999999999999998887654
No 59
>PRK06060 acyl-CoA synthetase; Validated
Probab=100.00 E-value=4.1e-49 Score=400.22 Aligned_cols=354 Identities=23% Similarity=0.315 Sum_probs=292.4
Q ss_pred CCHHhHHHhhhcc--CCCCcEEEeCCCCCeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHHhCC
Q 014952 25 LPLHTYCFENISQ--FADRPCIINGPTGDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGA 102 (415)
Q Consensus 25 ~tl~~~l~~~a~~--~p~~~a~~~~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~ 102 (415)
.|+.+.|.+.+++ +|+++|+++. ..+||+||.++++++|+.|.++|+++||+|+++++|+.+++++++||+++|+
T Consensus 4 ~~~~~~~~~~a~~~~~pd~~a~~~~---~~~Ty~eL~~~~~~lA~~L~~~g~~~g~~V~i~~~~~~~~~~~~la~~~aG~ 80 (705)
T PRK06060 4 GNLAGLLAEQASEAGWYDRPAFYAA---DVVTHGQIHDGAARLGEVLRNRGLSSGDRVLLCLPDSPDLVQLLLACLARGV 80 (705)
T ss_pred cCHHHHHHHHHhhccCCCceEEEec---CceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHhCc
Confidence 3788999988876 7999999874 4799999999999999999999999999999999999999999999999999
Q ss_pred eEeecCCCCCHHHHHHHHHhcCceEEEEcccchHHHHhhhhhcCceEEEeCCCCCCccchhhhhhhcc-cCCCCcccCCC
Q 014952 103 TSTTANPFYTPPEIAKQAIASKAKIIITQAVYNDKVRDLSEHHGARIVTIDPPPENCLHFSELITQAD-ENEIPAVKINP 181 (415)
Q Consensus 103 ~~v~l~~~~~~~~~~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~ 181 (415)
+++|++|.++.+++.++++++++++++++.+..+.+... .++ ...++..... ..........+
T Consensus 81 ~~vpi~p~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~------~~~----------~~~~~~~~~~~~~~~~~~~~~~ 144 (705)
T PRK06060 81 MAFLANPELHRDDHALAARNTEPALVVTSDALRDRFQPS------RVA----------EAAELMSEAARVAPGGYEPMGG 144 (705)
T ss_pred EEEecCCCCCHHHHHHHHhcCCCcEEEEchHHhhhhccc------ccc----------hhhhhhhhccccCCCCCCCCCC
Confidence 999999999999999999999999999987654433211 111 0111101100 00111223456
Q ss_pred CCeEEEecCCCCCCCCceeeechHHHHHHHhhhhcCCCCCccCCCCcEEEEccchHHHHhhHHHHHHHHHcCcEEEEcC-
Q 014952 182 DDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIMQ- 260 (415)
Q Consensus 182 ~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~l~~l~~G~~~v~~~- 260 (415)
+++++|+|||||||.||+|.++|+++.......... .+.+.+.++++...|++|..++...++.++..|+++++.+
T Consensus 145 ~~~a~il~TSGSTG~PKgV~~sh~~~~~~~~~~~~~---~~~~~~~d~~l~~~~~~~~~~~~~~~~~~l~~G~~~v~~~~ 221 (705)
T PRK06060 145 DALAYATYTSGTTGPPKAAIHRHADPLTFVDAMCRK---ALRLTPEDTGLCSARMYFAYGLGNSVWFPLATGGSAVINSA 221 (705)
T ss_pred CCeEEEEECCCCCCCCcEEEEccccHHHHHHHHHHH---hhCCCCcceeEEeccchhhcchhHHHHHHHhcCCEEEEeCC
Confidence 899999999999999999999999998776554321 2356788999999999999887656788999999999986
Q ss_pred CCCHHHHHHHHHhcCceeeecchHHHHHHHcCCCCCCCCcccceeeeecCCCCCHHHHHHHHhhCCCCccccccccccCC
Q 014952 261 KFDIVKLMELVQKYKVTVAPFVPPIVLAVAKSGDVDKYDMSSIRTVMSGAAPMGKELEDAVRAKLPHAKLGQGYGMTEAG 340 (415)
Q Consensus 261 ~~~~~~~~~~l~~~~~t~l~~~p~~l~~l~~~~~~~~~~l~~lr~v~~gG~~l~~~~~~~~~~~~~~~~~~~~YG~tE~~ 340 (415)
.+++..+...++++++|+++++|+++..+++... ...++++|.+++||+++++++.+++.+.|++.++++.||+||++
T Consensus 222 ~~~~~~~~~~i~~~~~t~~~~~P~~l~~l~~~~~--~~~~~slr~i~~gGe~l~~~~~~~~~~~~~~~~~~~~YG~tE~~ 299 (705)
T PRK06060 222 PVTPEAAAILSARFGPSVLYGVPNFFARVIDSCS--PDSFRSLRCVVSAGEALELGLAERLMEFFGGIPILDGIGSTEVG 299 (705)
T ss_pred CCCHHHHHHHHHhcCCeEEeeHHHHHHHHHHhcc--cccccceeEEEEecCcCCHHHHHHHHHHcCCCceEeeeeccccC
Confidence 4788889999999999999999999999887543 23578999999999999999999999999779999999999998
Q ss_pred ccccccccccCCccccCCCcccccccCCeEEEEeCCCCCCCCCCCceeEEEecCccccccccCCccee
Q 014952 341 PVLSMCLAFAKEPFEIKSGACGTVVRNAEMKIVDPDTGISLPRNQAGEICIRGAQIMKGTYHIYAPFL 408 (415)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~G~p~~~~~v~i~d~~~~~~~~~g~~Gel~v~~~~~~~gY~~~~~~~~ 408 (415)
.....+ .......+++|+|+++++++|+|+ ++++++.|+.|||+|+|+.++.|||++|+.+.
T Consensus 300 ~~~~~~-----~~~~~~~~~iG~p~~~~~v~i~d~-~g~~~~~g~~GEl~i~g~~v~~GY~~~~~~~~ 361 (705)
T PRK06060 300 QTFVSN-----RVDEWRLGTLGRVLPPYEIRVVAP-DGTTAGPGVEGDLWVRGPAIAKGYWNRPDSPV 361 (705)
T ss_pred ceEEec-----cCCCCCcCcccccCCCcEEEEECC-CCCCCCCCCceEEEEccchhhhhhhCCCcccc
Confidence 544322 112234678999999999999995 58999999999999999999999999998764
No 60
>TIGR03098 ligase_PEP_1 acyl-CoA ligase (AMP-forming), exosortase system type 1 associated. This group of proteins contains an AMP-binding domain (pfam00501) associated with acyl CoA-ligases. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present next to a decarboxylase enzyme. A number of sequences from Burkholderia species also hit this model, but the genomic context is obviously different. The hypothesis of a constant substrate for this family is only strong where the exosortase context is present.
Probab=100.00 E-value=1.6e-48 Score=383.43 Aligned_cols=371 Identities=23% Similarity=0.359 Sum_probs=310.4
Q ss_pred CHHhHHHhhhccCCCCcEEEeCCCCCeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHHhCCeEe
Q 014952 26 PLHTYCFENISQFADRPCIINGPTGDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGATST 105 (415)
Q Consensus 26 tl~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v 105 (415)
++.+.|...++++|+++++.+. ++.+||+||.++++++|+.|++.|+++||+|+++++|+.+++++++||+++|++++
T Consensus 1 ~~~~~~~~~~~~~p~~~a~~~~--~~~~ty~~l~~~v~~~a~~l~~~g~~~~~~V~i~~~n~~~~~~~~lA~~~~G~~~v 78 (515)
T TIGR03098 1 LLHHLLEDAAARLPDATALVHH--DRTLTYAALSERVLALASGLRGLGLARGERVAIYLDKRLETVTAMFGAALAGGVFV 78 (515)
T ss_pred CHHHHHHHHHHHCCCCeEEEEC--CceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHhcCEEEE
Confidence 4788999999999999999987 78999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHHHHHhcCceEEEEcccchHHHHhhhhhc-C-ceEEEeCCCC------CCccchhhhhhhcccCCCCcc
Q 014952 106 TANPFYTPPEIAKQAIASKAKIIITQAVYNDKVRDLSEHH-G-ARIVTIDPPP------ENCLHFSELITQADENEIPAV 177 (415)
Q Consensus 106 ~l~~~~~~~~~~~~l~~~~~~~vl~~~~~~~~~~~~~~~~-~-~~~i~~~~~~------~~~~~~~~l~~~~~~~~~~~~ 177 (415)
|+++..+.+++..+++..++++++++.+..+.+....... . ..++.++... .....++++.. ... .....
T Consensus 79 ~l~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~ 156 (515)
T TIGR03098 79 PINPLLKAEQVAHILADCNVRLLVTSSERLDLLHPALPGCHDLRTLILVGEPAHASEGGGESPSWPKLLA-LGD-ADPPH 156 (515)
T ss_pred eCCCCCCHHHHHHHHHcCCCeEEEEccchhhhhHhhhhcccccceEEEecCcccccCCccccccHHHhhc-ccc-ccccC
Confidence 9999999999999999999999999887666554433221 1 2344444321 11234555422 111 11223
Q ss_pred cCCCCCeEEEecCCCCCCCCceeeechHHHHHHHhhhhcCCCCCccCCCCcEEEEccchHHHHhhHHHHHHHHHcCcEEE
Q 014952 178 KINPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAIL 257 (415)
Q Consensus 178 ~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~l~~l~~G~~~v 257 (415)
....+++++|+|||||||.||+|.++|+++......... .+.+.+++++++.+|++|.+++. .++.++..|++++
T Consensus 157 ~~~~~~~~~i~~TSGTTG~PK~v~~t~~~l~~~~~~~~~----~~~~~~~d~~l~~~p~~~~~~~~-~~~~~l~~G~~~~ 231 (515)
T TIGR03098 157 PVIDSDMAAILYTSGSTGRPKGVVLSHRNLVAGAQSVAT----YLENRPDDRLLAVLPLSFDYGFN-QLTTAFYVGATVV 231 (515)
T ss_pred CCCcCCeEEEEECCCCCCCCceEEEecHHHHHHHHHHHH----HhCCCcccEEEEECchhhHhHHH-HHHHHHHcCCEEE
Confidence 345678999999999999999999999999988776665 44578899999999999999987 5789999999999
Q ss_pred EcCCCCHHHHHHHHHhcCceeeecchHHHHHHHcCCCCCCCCcccceeeeecCCCCCHHHHHHHHhhCCCCccccccccc
Q 014952 258 IMQKFDIVKLMELVQKYKVTVAPFVPPIVLAVAKSGDVDKYDMSSIRTVMSGAAPMGKELEDAVRAKLPHAKLGQGYGMT 337 (415)
Q Consensus 258 ~~~~~~~~~~~~~l~~~~~t~l~~~p~~l~~l~~~~~~~~~~l~~lr~v~~gG~~l~~~~~~~~~~~~~~~~~~~~YG~t 337 (415)
+.+.+++..+++.++++++|++.++|+++..|.+... ....++++|.+++||+++++++.+.+++.+++..+++.||+|
T Consensus 232 ~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~-~~~~~~~l~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~YG~t 310 (515)
T TIGR03098 232 LHDYLLPRDVLKALEKHGITGLAAVPPLWAQLAQLDW-PESAAPSLRYLTNSGGAMPRATLSRLRSFLPNARLFLMYGLT 310 (515)
T ss_pred EcCCCCHHHHHHHHHHcCCceEecChHHHHHHHhccc-CCCCccceEEEEecCCcCCHHHHHHHHHHCCCCeEeeeeccc
Confidence 9988999999999999999999999999999887532 224578999999999999999999999999888999999999
Q ss_pred cCCccccccccccCCccccCCCcccccccCCeEEEEeCCCCCCCCCCCceeEEEecCccccccccCCcceeeee
Q 014952 338 EAGPVLSMCLAFAKEPFEIKSGACGTVVRNAEMKIVDPDTGISLPRNQAGEICIRGAQIMKGTYHIYAPFLLSI 411 (415)
Q Consensus 338 E~~~~~~~~~~~~~~~~~~~~~~~G~p~~~~~v~i~d~~~~~~~~~g~~Gel~v~~~~~~~gY~~~~~~~~~~~ 411 (415)
|++..... ........++++|+|+++++++|+| +++++++.|+.|||+++|+.++.|||++++.+...|
T Consensus 311 E~~~~~~~----~~~~~~~~~~~vG~~~~~~~~~i~~-~~~~~~~~~~~Gel~v~g~~~~~gy~~~~~~~~~~~ 379 (515)
T TIGR03098 311 EAFRSTYL----PPEEVDRRPDSIGKAIPNAEVLVLR-EDGSECAPGEEGELVHRGALVAMGYWNDPEKTAERF 379 (515)
T ss_pred cccceEec----ccccccCCCCCcceecCCCEEEEEC-CCCCCCCCCCceEEEEcCchhhccccCCchhhhhhh
Confidence 99753322 1122345678999999999999999 558999999999999999999999999998776554
No 61
>PRK12476 putative fatty-acid--CoA ligase; Provisional
Probab=100.00 E-value=2.2e-49 Score=396.17 Aligned_cols=372 Identities=22% Similarity=0.341 Sum_probs=289.0
Q ss_pred CCCCCHHhHHHhhhccCCCCcEEEeCC-------CCCeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHH
Q 014952 22 PNHLPLHTYCFENISQFADRPCIINGP-------TGDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAF 94 (415)
Q Consensus 22 ~~~~tl~~~l~~~a~~~p~~~a~~~~~-------~~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~ 94 (415)
|+.+|+.+++.++++++|+++|+++.+ ..+.+||+||.++++++|++|.+. +++||+|+++++|++++++++
T Consensus 31 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~g~~~~~Ty~el~~~~~~lA~~L~~~-~~~gd~V~l~~~n~~e~~~~~ 109 (612)
T PRK12476 31 PPGTTLISLIERNIANVGDTVAYRYLDHSHSAAGCAVELTWTQLGVRLRAVGARLQQV-AGPGDRVAILAPQGIDYVAGF 109 (612)
T ss_pred CccCcHHHHHHHHHHhCCCceEEEEEccCCCCCCcceEEeHHHHHHHHHHHHHHHHHh-cCCCCEEEEECCCChhHHHHH
Confidence 345899999999999999999998642 124899999999999999999986 999999999999999999999
Q ss_pred HHHHHhCCeEeec-CCCCC--HHHHHHHHHhcCceEEEEcccchHHHHhhhhhcC----ceEEEeCCCCCCccchhhhhh
Q 014952 95 LGASYIGATSTTA-NPFYT--PPEIAKQAIASKAKIIITQAVYNDKVRDLSEHHG----ARIVTIDPPPENCLHFSELIT 167 (415)
Q Consensus 95 lA~~~~G~~~v~l-~~~~~--~~~~~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~----~~~i~~~~~~~~~~~~~~l~~ 167 (415)
|||+++|++++|+ ++.++ .+++.++++++++++++++.+..+.+........ ..++.++...
T Consensus 110 lA~~~aG~v~vpl~~~~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~----------- 178 (612)
T PRK12476 110 FAAIKAGTIAVPLFAPELPGHAERLDTALRDAEPTVVLTTTAAAEAVEGFLRNLPRLRRPRVIAIDAIP----------- 178 (612)
T ss_pred HHHHHcCceeEecCCCCcchhHHHHHHHHHhCCCCEEEEcHHHHHHHHHHHhhcccccCceEEEecccc-----------
Confidence 9999999999999 57766 7899999999999999998876665544322111 2344443211
Q ss_pred hcccCCCCcccCCCCCeEEEecCCCCCCCCceeeechHHHHHHHhhhhcCCCCCcc-CCCCcEEEEccchHHHHhhHHHH
Q 014952 168 QADENEIPAVKINPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLY-LHKEDVILCVLPLFHIYSLNSVL 246 (415)
Q Consensus 168 ~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~pl~~~~g~~~~~ 246 (415)
.............++++++|+|||||||.||||.++|+++..+...... .+. +.++++.++++|++|..|+...
T Consensus 179 ~~~~~~~~~~~~~~~d~a~i~yTSGTTG~PKgV~~sh~~l~~~~~~~~~----~~~~~~~~~~~l~~~Pl~h~~g~~~~- 253 (612)
T PRK12476 179 DSAGESFVPVELDTDDVSHLQYTSGSTRPPVGVEITHRAVGTNLVQMIL----SIDLLDRNTHGVSWLPLYHDMGLSMI- 253 (612)
T ss_pred ccccccccCCCCCCCceEEEEeCCCCCCCCceEEeeHHHHHHHHHHHHH----HhccCCCCceEEEeCCcccccchHHH-
Confidence 0001111122345689999999999999999999999999877665544 234 5678999999999999998754
Q ss_pred HHHHHcCcEEEEcCC--C--CHHHHHHHHH--hcCceeeecchHHHHHHHcCC----CCCCCCcccceeeeecCCCCCHH
Q 014952 247 LCALRVGAAILIMQK--F--DIVKLMELVQ--KYKVTVAPFVPPIVLAVAKSG----DVDKYDMSSIRTVMSGAAPMGKE 316 (415)
Q Consensus 247 l~~l~~G~~~v~~~~--~--~~~~~~~~l~--~~~~t~l~~~p~~l~~l~~~~----~~~~~~l~~lr~v~~gG~~l~~~ 316 (415)
+.++..|++.++..+ + ++..+++.++ +++++++..+|.++..++... .....+++++| +++||++++.+
T Consensus 254 ~~~~~~gg~~~~~~~~~~~~~p~~~~~~i~~~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~l~~lr-~~~gg~~~~~~ 332 (612)
T PRK12476 254 GFPAVYGGHSTLMSPTAFVRRPQRWIKALSEGSRTGRVVTAAPNFAYEWAAQRGLPAEGDDIDLSNVV-LIIGSEPVSID 332 (612)
T ss_pred HHHHhcCCeEEEECHHHHHHHHHHHHHHHhhhccCCeEEEeCCcHHHHHHHHhcChhhhcCcchhHhe-EEecccCCCHH
Confidence 444445555555442 3 8899999994 589999999999888777642 12345689999 99999999999
Q ss_pred HHHHHHhhCC-----CCccccccccccCCccccccccccC----------------------CccccCCCcccccccCCe
Q 014952 317 LEDAVRAKLP-----HAKLGQGYGMTEAGPVLSMCLAFAK----------------------EPFEIKSGACGTVVRNAE 369 (415)
Q Consensus 317 ~~~~~~~~~~-----~~~~~~~YG~tE~~~~~~~~~~~~~----------------------~~~~~~~~~~G~p~~~~~ 369 (415)
+.+++.+.|+ ...+++.||+||++..++....... .+.....+++|+|+|+++
T Consensus 333 ~~~~~~~~~~~~g~~~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~G~~~~g~~ 412 (612)
T PRK12476 333 AVTTFNKAFAPYGLPRTAFKPSYGIAEATLFVATIAPDAEPSVVYLDREQLGAGRAVRVAADAPNAVAHVSCGQVARSQW 412 (612)
T ss_pred HHHHHHHHHHhcCCCccccccccchhhhheeeeccCCCCCceEEEEcHHHhhCCCeeecCCCCCCcceeEeCCCcCCCCE
Confidence 9999999873 2458999999998765433211000 000112357899999999
Q ss_pred EEEEeCCCCCCCCCCCceeEEEecCccccccccCCcceeeee
Q 014952 370 MKIVDPDTGISLPRNQAGEICIRGAQIMKGTYHIYAPFLLSI 411 (415)
Q Consensus 370 v~i~d~~~~~~~~~g~~Gel~v~~~~~~~gY~~~~~~~~~~~ 411 (415)
++|+|++++++++.|+.|||+++|++++.|||++|+.+.++|
T Consensus 413 v~ivd~~~g~~~~~g~~GEl~v~g~~v~~GY~~~~~~t~~~f 454 (612)
T PRK12476 413 AVIVDPDTGAELPDGEVGEIWLHGDNIGRGYWGRPEETERTF 454 (612)
T ss_pred EEEEeCCCCcCCCCCCEEEEEEcCCcccccccCChHHHHHHH
Confidence 999997769999999999999999999999999999988776
No 62
>PRK07470 acyl-CoA synthetase; Validated
Probab=100.00 E-value=2.1e-48 Score=383.54 Aligned_cols=379 Identities=27% Similarity=0.412 Sum_probs=308.7
Q ss_pred CCCHHhHHHhhhccCCCCcEEEeCCCCCeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHHhCCe
Q 014952 24 HLPLHTYCFENISQFADRPCIINGPTGDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGAT 103 (415)
Q Consensus 24 ~~tl~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~ 103 (415)
.+|+.+.+...++++|+++++++. ++.+||+||.++++++|+.|+++|+++||+|+++++|+.+++++++||+++|++
T Consensus 6 ~~~~~~~~~~~a~~~p~~~a~~~~--~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~v~i~~~~~~~~~~~~lA~~~~G~~ 83 (528)
T PRK07470 6 VMNLAHFLRQAARRFPDRIALVWG--DRSWTWREIDARVDALAAALAARGVRKGDRILVHSRNCNQMFESMFAAFRLGAV 83 (528)
T ss_pred CCCHHHHHHHHHHHCCCceEEEEC--CccccHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHHHHHHHHHhCCeE
Confidence 488999999999999999999986 789999999999999999999999999999999999999999999999999999
Q ss_pred EeecCCCCCHHHHHHHHHhcCceEEEEcccchHHHHhhhhhcC--ceEEEeCCCCCCccchhhhhhhcccCCCCcccCCC
Q 014952 104 STTANPFYTPPEIAKQAIASKAKIIITQAVYNDKVRDLSEHHG--ARIVTIDPPPENCLHFSELITQADENEIPAVKINP 181 (415)
Q Consensus 104 ~v~l~~~~~~~~~~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~--~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 181 (415)
++++++..+.+++.+++.+++++.++++++..+.......... ..++.++... ....++++...............+
T Consensus 84 ~v~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 162 (528)
T PRK07470 84 WVPTNFRQTPDEVAYLAEASGARAMICHADFPEHAAAVRAASPDLTHVVAIGGAR-AGLDYEALVARHLGARVANAAVDH 162 (528)
T ss_pred EEecCccCCHHHHHHHHHhcCceEEEEcchhHHHHHHHHhhCCcCceEEEeCCCc-ccccHHHHHhcCCCCCCCcccCCC
Confidence 9999999999999999999999999999887665554433221 2344444322 234555553322122222344567
Q ss_pred CCeEEEecCCCCCCCCceeeechHHHHHHHhhhhcCCCCCccCCCCcEEEEccchHHHHhhHHHHHHHHHcCcEEEEcC-
Q 014952 182 DDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIMQ- 260 (415)
Q Consensus 182 ~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~l~~l~~G~~~v~~~- 260 (415)
+++++|+|||||||.||+|.++|+++...+....... .....+.++++..+|++|..++.. + ..+..|++.++.+
T Consensus 163 ~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~--~~~~~~~d~~l~~~p~~~~~~~~~-~-~~~~~g~~~~~~~~ 238 (528)
T PRK07470 163 DDPCWFFFTSGTTGRPKAAVLTHGQMAFVITNHLADL--MPGTTEQDASLVVAPLSHGAGIHQ-L-CQVARGAATVLLPS 238 (528)
T ss_pred CCeEEEEeCCCCCCCCcEEEEehhhHHHHHHHHHHHh--ccCCCcccEEEEeccchhHHHHHH-H-HHHhcCceEEEecc
Confidence 8999999999999999999999999976544332211 113567899999999999999863 3 4577787777664
Q ss_pred -CCCHHHHHHHHHhcCceeeecchHHHHHHHcCCCCCCCCcccceeeeecCCCCCHHHHHHHHhhCCCCccccccccccC
Q 014952 261 -KFDIVKLMELVQKYKVTVAPFVPPIVLAVAKSGDVDKYDMSSIRTVMSGAAPMGKELEDAVRAKLPHAKLGQGYGMTEA 339 (415)
Q Consensus 261 -~~~~~~~~~~l~~~~~t~l~~~p~~l~~l~~~~~~~~~~l~~lr~v~~gG~~l~~~~~~~~~~~~~~~~~~~~YG~tE~ 339 (415)
.++++.+++.++++++|++.++|.++..+.+.+.....+++++|.+++||++++.+..+++.+.+ +..+++.||+||+
T Consensus 239 ~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~~~~gG~~l~~~~~~~~~~~~-g~~~~~~YG~TE~ 317 (528)
T PRK07470 239 ERFDPAEVWALVERHRVTNLFTVPTILKMLVEHPAVDRYDHSSLRYVIYAGAPMYRADQKRALAKL-GKVLVQYFGLGEV 317 (528)
T ss_pred cCcCHHHHHHHHHhcCCeEEechHHHHHHHHhCcCcCCCCCcceEEEEEcCCCCCHHHHHHHHHHh-CcHHHHhCCCccc
Confidence 47899999999999999999999999999887766667789999999999999999999999998 7889999999999
Q ss_pred Cccccccccc-cC--CccccCCCcccccccCCeEEEEeCCCCCCCCCCCceeEEEecCccccccccCCcceeeee
Q 014952 340 GPVLSMCLAF-AK--EPFEIKSGACGTVVRNAEMKIVDPDTGISLPRNQAGEICIRGAQIMKGTYHIYAPFLLSI 411 (415)
Q Consensus 340 ~~~~~~~~~~-~~--~~~~~~~~~~G~p~~~~~v~i~d~~~~~~~~~g~~Gel~v~~~~~~~gY~~~~~~~~~~~ 411 (415)
++.++.+... .. .......+++|+|+++++++|+| +++++++.|+.|||+++|+.++.||+++++.+...|
T Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~g~~~~i~d-~~~~~~~~g~~Gel~i~~~~~~~gy~~~~~~~~~~~ 391 (528)
T PRK07470 318 TGNITVLPPALHDAEDGPDARIGTCGFERTGMEVQIQD-DEGRELPPGETGEICVIGPAVFAGYYNNPEANAKAF 391 (528)
T ss_pred CCceeecchhhccccccccceeeccCcccCCcEEEEEC-CCCCCCCCCCceEEEEeCCccchhhcCCHHHHHhhh
Confidence 8765543211 00 01123457899999999999999 558999999999999999999999999998876544
No 63
>PRK06155 crotonobetaine/carnitine-CoA ligase; Provisional
Probab=100.00 E-value=3.3e-48 Score=382.46 Aligned_cols=371 Identities=23% Similarity=0.382 Sum_probs=307.3
Q ss_pred CCCHHhHHHhhhccCCCCcEEEeCCCCCeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHHhCCe
Q 014952 24 HLPLHTYCFENISQFADRPCIINGPTGDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGAT 103 (415)
Q Consensus 24 ~~tl~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~ 103 (415)
+.|+.++|.++++.+|+++|+++. ++.+||+||.++++++|..|.+.|+++|++|+++++|+.+++++++||+++|++
T Consensus 20 ~~~l~~~l~~~a~~~p~~~a~~~~--~~~~Ty~el~~~v~~la~~L~~~gi~~g~~V~v~~~n~~~~~~~~lA~~~~G~~ 97 (542)
T PRK06155 20 ERTLPAMLARQAERYPDRPLLVFG--GTRWTYAEAARAAAAAAHALAAAGVKRGDRVALMCGNRIEFLDVFLGCAWLGAI 97 (542)
T ss_pred ccCHHHHHHHHHHHCCCCeEEEeC--CccccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHHHHHHHHHHHhCCE
Confidence 588999999999999999999987 789999999999999999999999999999999999999999999999999999
Q ss_pred EeecCCCCCHHHHHHHHHhcCceEEEEcccchHHHHhhhhhc-C-ceEEEeCCCCCC--ccchhhhhhhcccCCCCcccC
Q 014952 104 STTANPFYTPPEIAKQAIASKAKIIITQAVYNDKVRDLSEHH-G-ARIVTIDPPPEN--CLHFSELITQADENEIPAVKI 179 (415)
Q Consensus 104 ~v~l~~~~~~~~~~~~l~~~~~~~vl~~~~~~~~~~~~~~~~-~-~~~i~~~~~~~~--~~~~~~l~~~~~~~~~~~~~~ 179 (415)
++|+++.++.+++..+++++++++++++.+....+....... . .+++.++..... ...+.................
T Consensus 98 ~vpl~~~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (542)
T PRK06155 98 AVPINTALRGPQLEHILRNSGARLLVVEAALLAALEAADPGDLPLPAVWLLDAPASVSVPAGWSTAPLPPLDAPAPAAAV 177 (542)
T ss_pred EEEeccccCHHHHHHHHHhcCceEEEEChhhHHHHHHhcccccCcceEEEecCccccccccccchhhhcccCCCCCCCCC
Confidence 999999999999999999999999999987776655543221 1 234444432210 001111000000011122334
Q ss_pred CCCCeEEEecCCCCCCCCceeeechHHHHHHHhhhhcCCCCCccCCCCcEEEEccchHHHHhhHHHHHHHHHcCcEEEEc
Q 014952 180 NPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIM 259 (415)
Q Consensus 180 ~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~l~~l~~G~~~v~~ 259 (415)
.++++++|+|||||||.||+|.++|.++......... .+.+.+++++++..|++|..++. .++.++..|+++++.
T Consensus 178 ~~~~~a~il~TSGTTG~PK~V~~t~~~~~~~~~~~~~----~~~~~~~~~~l~~~pl~~~~~~~-~~~~~l~~G~~~~~~ 252 (542)
T PRK06155 178 QPGDTAAILYTSGTTGPSKGVCCPHAQFYWWGRNSAE----DLEIGADDVLYTTLPLFHTNALN-AFFQALLAGATYVLE 252 (542)
T ss_pred CCCCeEEEEECCCCCCCCcEEEEEHHHHHHHHHHHHH----hcCCCCCCEEEEecCHHHHHHHH-HHHHHHHcCceEEee
Confidence 6789999999999999999999999999877665555 44678899999999999999987 478999999999999
Q ss_pred CCCCHHHHHHHHHhcCceeeecchHHHHHHHcCCCCCCCCcccceeeeecCCCCCHHHHHHHHhhCCCCccccccccccC
Q 014952 260 QKFDIVKLMELVQKYKVTVAPFVPPIVLAVAKSGDVDKYDMSSIRTVMSGAAPMGKELEDAVRAKLPHAKLGQGYGMTEA 339 (415)
Q Consensus 260 ~~~~~~~~~~~l~~~~~t~l~~~p~~l~~l~~~~~~~~~~l~~lr~v~~gG~~l~~~~~~~~~~~~~~~~~~~~YG~tE~ 339 (415)
+++++..+++.++++++|++.++|.++..+.+........++++|.++.|| +++++.+++++.+ +.++++.||+||+
T Consensus 253 ~~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~l~~~~~g~--~~~~~~~~~~~~~-~~~v~~~YG~tE~ 329 (542)
T PRK06155 253 PRFSASGFWPAVRRHGATVTYLLGAMVSILLSQPARESDRAHRVRVALGPG--VPAALHAAFRERF-GVDLLDGYGSTET 329 (542)
T ss_pred CCCCHHHHHHHHHHhCCcEEEchHHHHHHHHcCcCccccccCceEEEEEcC--CCHHHHHHHHHHc-CCCEEeeeccccc
Confidence 989999999999999999999999999999887766666678899887665 5788999999998 8999999999999
Q ss_pred CccccccccccCCccccCCCcccccccCCeEEEEeCCCCCCCCCCCceeEEEecC---ccccccccCCcceeeee
Q 014952 340 GPVLSMCLAFAKEPFEIKSGACGTVVRNAEMKIVDPDTGISLPRNQAGEICIRGA---QIMKGTYHIYAPFLLSI 411 (415)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~G~p~~~~~v~i~d~~~~~~~~~g~~Gel~v~~~---~~~~gY~~~~~~~~~~~ 411 (415)
+.++..+ ......+++|+|+++++++|+| +++++++.|+.|||+++|+ .++.||+++++.+...|
T Consensus 330 ~~~~~~~------~~~~~~~~vG~~~~~~~~~i~d-~~~~~~~~g~~Gei~v~~~~~~~~~~GY~~~~~~~~~~~ 397 (542)
T PRK06155 330 NFVIAVT------HGSQRPGSMGRLAPGFEARVVD-EHDQELPDGEPGELLLRADEPFAFATGYFGMPEKTVEAW 397 (542)
T ss_pred CccccCC------CCCCCCCCcCccCCCceEEEEC-CCCCCCCCCCceEEEEecCCccccchhhcCCHHHHHHhh
Confidence 8765432 1234567899999999999999 5599999999999999999 69999999998876554
No 64
>PRK06178 acyl-CoA synthetase; Validated
Probab=100.00 E-value=5.9e-48 Score=383.32 Aligned_cols=400 Identities=26% Similarity=0.380 Sum_probs=317.7
Q ss_pred ccccceeecCCCCC-CCCC-CCCHHhHHHhhhccCCCCcEEEeCCCCCeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEE
Q 014952 6 DHQEFIFRSKLPDI-YIPN-HLPLHTYCFENISQFADRPCIINGPTGDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLL 83 (415)
Q Consensus 6 ~~~~~~~~~~~~~~-~~~~-~~tl~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~ 83 (415)
+.+..+|...+|.. ..|. ..++.+.|.++++.+|+++++.+. ++.+||.||.++++++|+.|.++|+++|++|+++
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~a~~~p~~~al~~~--~~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~i~ 89 (567)
T PRK06178 12 ALQQAAWPAGIPREPEYPHGERPLTEYLRAWARERPQRPAIIFY--GHVITYAELDELSDRFAALLRQRGVGAGDRVAVF 89 (567)
T ss_pred hhHHhhCCcCCCCCCCCCcCcccHHHHHHHHHHHCCCceEEEEC--CceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEE
Confidence 44567788766655 2222 378999999999999999999987 7899999999999999999999999999999999
Q ss_pred cCCchhHHHHHHHHHHhCCeEeecCCCCCHHHHHHHHHhcCceEEEEcccchHHHHhhhhhcCceEEEe-C--CCCCC--
Q 014952 84 LQNCPQFVFAFLGASYIGATSTTANPFYTPPEIAKQAIASKAKIIITQAVYNDKVRDLSEHHGARIVTI-D--PPPEN-- 158 (415)
Q Consensus 84 ~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~i~~-~--~~~~~-- 158 (415)
++|+.+++++++||+++|++++|++|..+.+++.+++++++++++++++...+.+.........+.+.+ . +..+.
T Consensus 90 ~~n~~~~~~~~lA~~~~G~~~v~l~p~~~~~~~~~~l~~~~~~~ii~~~~~~~~l~~~~~~~~~~~i~~~~~~~~~~~~~ 169 (567)
T PRK06178 90 LPNCPQFHIVFFGILKLGAVHVPVSPLFREHELSYELNDAGAEVLLALDQLAPVVEQVRAETSLRHVIVTSLADVLPAEP 169 (567)
T ss_pred CCCCcHHHHHHHHHHHhCeEEeecCCCCCHHHHHHHHHhcCCcEEEEccchHHHHHHhhccCCcceEEEecccccccccc
Confidence 999999999999999999999999999999999999999999999999888777666543333332222 1 10000
Q ss_pred --------------ccchhhhhhhc--ccCCCCcccCCCCCeEEEecCCCCCCCCceeeechHHHHHHHhhhhcCCCCCc
Q 014952 159 --------------CLHFSELITQA--DENEIPAVKINPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNL 222 (415)
Q Consensus 159 --------------~~~~~~l~~~~--~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~ 222 (415)
...+.++.... ...........++++++|+|||||||.||+|.++|.++.......... ..
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~t~~~~~~~~~~~~~~---~~ 246 (567)
T PRK06178 170 TLPLPDSLRAPRLAAAGAIDLLPALRACTAPVPLPPPALDALAALNYTGGTTGMPKGCEHTQRDMVYTAAAAYAV---AV 246 (567)
T ss_pred ccccccccccccccccccccHHHHhhccccccccCCCCCCCeEEEEeCCCCCCCCceEEeccHHHHHHHHHHHHH---hc
Confidence 00111111111 111112233567899999999999999999999999998765544332 12
Q ss_pred cCCCCcEEEEccchHHHHhhHHHHHHHHHcCcEEEEcCCCCHHHHHHHHHhcCceeeecchHHHHHHHcCCCCCCCCccc
Q 014952 223 YLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIMQKFDIVKLMELVQKYKVTVAPFVPPIVLAVAKSGDVDKYDMSS 302 (415)
Q Consensus 223 ~~~~~~~~~~~~pl~~~~g~~~~~l~~l~~G~~~v~~~~~~~~~~~~~l~~~~~t~l~~~p~~l~~l~~~~~~~~~~l~~ 302 (415)
...+.++++..+|++|.+|+...++.++..|+++++.+++++..+++.++++++|.+.++|..+..+.........++++
T Consensus 247 ~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~l~~~~~~~~~~~~i~~~~~t~~~~~~~~~~~l~~~~~~~~~~l~~ 326 (567)
T PRK06178 247 VGGEDSVFLSFLPEFWIAGENFGLLFPLFSGATLVLLARWDAVAFMAAVERYRVTRTVMLVDNAVELMDHPRFAEYDLSS 326 (567)
T ss_pred cCCCCcEEEEecchHHHHHHHHHHHHHHHcCceEEEeCCCCHHHHHHHHHHhCCeEEeccHHHHHHHHhCCCCCCCCcch
Confidence 46788999999999999998767888999999999999899999999999999999999999999988776555566788
Q ss_pred ceeeeec--CCCCCHHHHHHHHhhCCCCccc-cccccccCCccccccccccC--CccccCCCcccccccCCeEEEEeCCC
Q 014952 303 IRTVMSG--AAPMGKELEDAVRAKLPHAKLG-QGYGMTEAGPVLSMCLAFAK--EPFEIKSGACGTVVRNAEMKIVDPDT 377 (415)
Q Consensus 303 lr~v~~g--G~~l~~~~~~~~~~~~~~~~~~-~~YG~tE~~~~~~~~~~~~~--~~~~~~~~~~G~p~~~~~v~i~d~~~ 377 (415)
+|.+..+ |+.+++++.+++++.+ +..++ +.||+||+++..+....... ......++++|+|+||++++|+|+++
T Consensus 327 l~~~~~~~~~~~~~~~~~~~~~~~~-g~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~vG~p~~g~~v~v~d~~~ 405 (567)
T PRK06178 327 LRQVRVVSFVKKLNPDYRQRWRALT-GSVLAEAAWGMTETHTCDTFTAGFQDDDFDLLSQPVFVGLPVPGTEFKICDFET 405 (567)
T ss_pred heeeeeccccccCCHHHHHHHHHHh-CCcccccccccccccccceeccccccCccccccCCcccccccCCcEEEEEcCCC
Confidence 8876544 5899999999999998 55555 57999999865444321111 11234567899999999999999888
Q ss_pred CCCCCCCCceeEEEecCccccccccCCcceeeee
Q 014952 378 GISLPRNQAGEICIRGAQIMKGTYHIYAPFLLSI 411 (415)
Q Consensus 378 ~~~~~~g~~Gel~v~~~~~~~gY~~~~~~~~~~~ 411 (415)
+++++.|+.|||+++|++++.|||++++.+...|
T Consensus 406 ~~~~~~g~~Gel~v~g~~v~~gY~~~~~~~~~~~ 439 (567)
T PRK06178 406 GELLPLGAEGEIVVRTPSLLKGYWNKPEATAEAL 439 (567)
T ss_pred CCcCCCCCceEEEEECCcccccccCChhhhhhcc
Confidence 9999999999999999999999999998876554
No 65
>PRK06710 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=4.1e-48 Score=384.18 Aligned_cols=392 Identities=30% Similarity=0.476 Sum_probs=309.3
Q ss_pred cceeecCCCCCCCCC----CCCHHhHHHhhhccCCCCcEEEeCCCCCeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEc
Q 014952 9 EFIFRSKLPDIYIPN----HLPLHTYCFENISQFADRPCIINGPTGDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLL 84 (415)
Q Consensus 9 ~~~~~~~~~~~~~~~----~~tl~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~ 84 (415)
++.|...+|+-...+ -.++.+.+...++++|+++|+++. ++.+||+||..++.++|++|.+.|+++||+|++++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~p~~~a~~~~--~~~~ty~eL~~~~~~la~~L~~~gv~~gd~V~i~~ 81 (563)
T PRK06710 4 EKPWLKSYPEEIPSTISYDIQPLHKYVEQMASRYPEKKALHFL--GKDITFSVFHDKVKRFANYLQKLGVEKGDRVAIML 81 (563)
T ss_pred CCcccccCCccCCCCCCCCcccHHHHHHHHHHHCCCceEEEec--CeeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEC
Confidence 467777776632222 368999999999999999999997 88999999999999999999999999999999999
Q ss_pred CCchhHHHHHHHHHHhCCeEeecCCCCCHHHHHHHHHhcCceEEEEcccchHHHHhhhhhcCceEEEeCCC------CC-
Q 014952 85 QNCPQFVFAFLGASYIGATSTTANPFYTPPEIAKQAIASKAKIIITQAVYNDKVRDLSEHHGARIVTIDPP------PE- 157 (415)
Q Consensus 85 ~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~i~~~~~------~~- 157 (415)
+|+.++++++|||+++|++++|++|..+.+++..+++.++++.+++++.................+.+... ..
T Consensus 82 ~~~~~~~~~~lA~~~~G~~~vpi~p~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (563)
T PRK06710 82 PNCPQAVIGYYGTLLAGGIVVQTNPLYTERELEYQLHDSGAKVILCLDLVFPRVTNVQSATKIEHVIVTRIADFLPFPKN 161 (563)
T ss_pred CCChHHHHHHHHHHHcCeEEeccCcccCHHHHHHHHhccCCeEEEEeccchhhhhccchhhccceeEEeccccccccccc
Confidence 99999999999999999999999999999999999999999999998866554433322211111111100 00
Q ss_pred --------------------C-ccchhhhhhhcccCCCCcccCCCCCeEEEecCCCCCCCCceeeechHHHHHHHhhhhc
Q 014952 158 --------------------N-CLHFSELITQADENEIPAVKINPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVD 216 (415)
Q Consensus 158 --------------------~-~~~~~~l~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~ 216 (415)
. ...++.+ ...............++.++++|||||||.||+|.++|+++..+......
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~ 240 (563)
T PRK06710 162 LLYPFVQKKQSNLVVKVSESETIHLWNSV-EKEVNTGVEVPCDPENDLALLQYTGGTTGFPKGVMLTHKNLVSNTLMGVQ 240 (563)
T ss_pred cccchhhcccccccccccccchhhhhhhh-hhccccccccccCCCCCEEEEEcCCCCCCCCceEEEehHHHHHHHHHHHh
Confidence 0 0001111 01011111111123578999999999999999999999999765433332
Q ss_pred CCCCCccC-CCCcEEEEccchHHHHhhHHHHHHHHHcCcEEEEcCCCCHHHHHHHHHhcCceeeecchHHHHHHHcCCCC
Q 014952 217 GENPNLYL-HKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIMQKFDIVKLMELVQKYKVTVAPFVPPIVLAVAKSGDV 295 (415)
Q Consensus 217 ~~~~~~~~-~~~~~~~~~~pl~~~~g~~~~~l~~l~~G~~~v~~~~~~~~~~~~~l~~~~~t~l~~~p~~l~~l~~~~~~ 295 (415)
.. +.. ...+++++..|++|.+++...++.++..|+++++.+++++..+++.++++++|++.++|+++..+++....
T Consensus 241 ~~---~~~~~~~~~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~ 317 (563)
T PRK06710 241 WL---YNCKEGEEVVLGVLPFFHVYGMTAVMNLSIMQGYKMVLIPKFDMKMVFEAIKKHKVTLFPGAPTIYIALLNSPLL 317 (563)
T ss_pred hc---cCCCCCCceEEEeCchHHHHHHHHHHHHHHHcCCeEEEcCCCCHHHHHHHHHHcCCeEEeccHHHHHHHHcCCcc
Confidence 11 122 34568899999999999876667789999999999889999999999999999999999999999887655
Q ss_pred CCCCcccceeeeecCCCCCHHHHHHHHhhCCCCccccccccccCCccccccccccCCccccCCCcccccccCCeEEEEeC
Q 014952 296 DKYDMSSIRTVMSGAAPMGKELEDAVRAKLPHAKLGQGYGMTEAGPVLSMCLAFAKEPFEIKSGACGTVVRNAEMKIVDP 375 (415)
Q Consensus 296 ~~~~l~~lr~v~~gG~~l~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~G~p~~~~~v~i~d~ 375 (415)
+..+++++|.+++||++++.++.+++.+.+ +.++++.||+||++.+..... ......++++|+|++++.++|+|+
T Consensus 318 ~~~~~~~lr~v~~gg~~~~~~~~~~~~~~~-~~~~~~~YG~tE~~~~~~~~~----~~~~~~~~~~G~~~~~~~~~i~~~ 392 (563)
T PRK06710 318 KEYDISSIRACISGSAPLPVEVQEKFETVT-GGKLVEGYGLTESSPVTHSNF----LWEKRVPGSIGVPWPDTEAMIMSL 392 (563)
T ss_pred ccCChhhhhheeeCCCcCCHHHHHHHHHhh-CCCEecccccccCccccccCc----ccccccCCccCCCCCCCeEEEEEC
Confidence 566778999999999999999999999988 889999999999986443221 112234578999999999999998
Q ss_pred CCCCCCCCCCceeEEEecCccccccccCCcceeeee
Q 014952 376 DTGISLPRNQAGEICIRGAQIMKGTYHIYAPFLLSI 411 (415)
Q Consensus 376 ~~~~~~~~g~~Gel~v~~~~~~~gY~~~~~~~~~~~ 411 (415)
+++++++.|+.|||+++|+.++.||+++|+.+...|
T Consensus 393 ~~~~~~~~g~~Gel~v~g~~~~~gY~~~~~~~~~~~ 428 (563)
T PRK06710 393 ETGEALPPGEIGEIVVKGPQIMKGYWNKPEETAAVL 428 (563)
T ss_pred CCCccCCCCCceEEEEecCccchhhhCChHHHhhhc
Confidence 889999999999999999999999999998876543
No 66
>PRK12583 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=5.2e-48 Score=383.45 Aligned_cols=381 Identities=27% Similarity=0.444 Sum_probs=311.7
Q ss_pred CCCHHhHHHhhhccCCCCcEEEeCCCCCeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHHhCCe
Q 014952 24 HLPLHTYCFENISQFADRPCIINGPTGDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGAT 103 (415)
Q Consensus 24 ~~tl~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~ 103 (415)
..|+.+.|.+.++++|+++|++..+.++.+||.||.++++++|+.|.+.|+++||+|+++++|+.++++++|||+++|++
T Consensus 17 ~~~l~~~l~~~~~~~p~~~a~~~~~~~~~~Ty~~l~~~~~~~a~~L~~~gi~~g~~V~i~~~~~~~~~~~~~a~~~~G~~ 96 (558)
T PRK12583 17 TQTIGDAFDATVARFPDREALVVRHQALRYTWRQLADAVDRLARGLLALGVQPGDRVGIWAPNCAEWLLTQFATARIGAI 96 (558)
T ss_pred cCcHHHHHHHHHHHCCCCeEEEecCCCcEecHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCChHHHHHHHHHHhhCCE
Confidence 46899999999999999999998766789999999999999999999999999999999999999999999999999999
Q ss_pred EeecCCCCCHHHHHHHHHhcCceEEEEcccch-----HHHHhhhhh--------------cC-ceEEEeCCC-CCCccch
Q 014952 104 STTANPFYTPPEIAKQAIASKAKIIITQAVYN-----DKVRDLSEH--------------HG-ARIVTIDPP-PENCLHF 162 (415)
Q Consensus 104 ~v~l~~~~~~~~~~~~l~~~~~~~vl~~~~~~-----~~~~~~~~~--------------~~-~~~i~~~~~-~~~~~~~ 162 (415)
++++++.++.+++..++.++++++++++.... ..+...... .. ...+..+.. ......+
T Consensus 97 ~v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (558)
T PRK12583 97 LVNINPAYRASELEYALGQSGVRWVICADAFKTSDYHAMLQELLPGLAEGQPGALACERLPELRGVVSLAPAPPPGFLAW 176 (558)
T ss_pred EEecCCCCCHHHHHHHHHhcCCcEEEEeccccccchhHHHHHHhhhhccccccccccccCCcceEEEEecCCCCccccch
Confidence 99999999999999999999999999976432 111111110 00 122222221 1122233
Q ss_pred hhhhhhccc-----CCCCcccCCCCCeEEEecCCCCCCCCceeeechHHHHHHHhhhhcCCCCCccCCCCcEEEEccchH
Q 014952 163 SELITQADE-----NEIPAVKINPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLF 237 (415)
Q Consensus 163 ~~l~~~~~~-----~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~ 237 (415)
+++...... .........+++.++++|||||||.||+|.++|.++..+...... .+++.++++++..+|++
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGsTG~PK~v~~s~~~l~~~~~~~~~----~~~~~~~d~~~~~~p~~ 252 (558)
T PRK12583 177 HELQARGETVSREALAERQASLDRDDPINIQYTSGTTGFPKGATLSHHNILNNGYFVAE----SLGLTEHDRLCVPVPLY 252 (558)
T ss_pred HhhhhcccccccccccccccccCCCCcEEEEECCCCCCCCceEEeeHHHHHHHHHHHHH----HhCCCCCCeEEEecCch
Confidence 333111111 011122345788999999999999999999999999888777666 34578899999999999
Q ss_pred HHHhhHHHHHHHHHcCcEEEEcC-CCCHHHHHHHHHhcCceeeecchHHHHHHHcCCCCCCCCcccceeeeecCCCCCHH
Q 014952 238 HIYSLNSVLLCALRVGAAILIMQ-KFDIVKLMELVQKYKVTVAPFVPPIVLAVAKSGDVDKYDMSSIRTVMSGAAPMGKE 316 (415)
Q Consensus 238 ~~~g~~~~~l~~l~~G~~~v~~~-~~~~~~~~~~l~~~~~t~l~~~p~~l~~l~~~~~~~~~~l~~lr~v~~gG~~l~~~ 316 (415)
|.+|....++.++..|+++++.. .+++..+++.++++++|++.++|.++..+++.......+++++|.+++||++++++
T Consensus 253 ~~~g~~~~~~~~l~~g~~v~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~~~lr~i~~~G~~~~~~ 332 (558)
T PRK12583 253 HCFGMVLANLGCMTVGACLVYPNEAFDPLATLQAVEEERCTALYGVPTMFIAELDHPQRGNFDLSSLRTGIMAGAPCPIE 332 (558)
T ss_pred hhhhHHHHHHHHHhcCceEEeecCCCCHHHHHHHHHHcCCeEEeccHHHHHHHHccccccCCCchhheEEEecCCCCCHH
Confidence 99999888889999999998754 57899999999999999999999999888877665667789999999999999999
Q ss_pred HHHHHHhhCCCCccccccccccCCccccccccccCCccccCCCcccccccCCeEEEEeCCCCCCCCCCCceeEEEecCcc
Q 014952 317 LEDAVRAKLPHAKLGQGYGMTEAGPVLSMCLAFAKEPFEIKSGACGTVVRNAEMKIVDPDTGISLPRNQAGEICIRGAQI 396 (415)
Q Consensus 317 ~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~G~p~~~~~v~i~d~~~~~~~~~g~~Gel~v~~~~~ 396 (415)
+.+++.+.++...+++.||+||++++...+.. .........++|+|+|++.++|+|++ +++++.|+.|||+++|+.+
T Consensus 333 ~~~~~~~~~~~~~i~~~YG~tE~~~~~~~~~~--~~~~~~~~~~vG~p~~~~~~~i~d~~-~~~~~~g~~Gel~v~g~~~ 409 (558)
T PRK12583 333 VMRRVMDEMHMAEVQIAYGMTETSPVSLQTTA--ADDLERRVETVGRTQPHLEVKVVDPD-GATVPRGEIGELCTRGYSV 409 (558)
T ss_pred HHHHHHHHcCCcceeccccccccccceeccCc--ccccccccCCCCccCCCCeEEEECCC-CCCCCCCCeeEEEEEeCcc
Confidence 99999999966789999999999976554311 11223456789999999999999976 8999999999999999999
Q ss_pred ccccccCCcceeeee
Q 014952 397 MKGTYHIYAPFLLSI 411 (415)
Q Consensus 397 ~~gY~~~~~~~~~~~ 411 (415)
+.||+++++.+...|
T Consensus 410 ~~gy~~~~~~~~~~~ 424 (558)
T PRK12583 410 MKGYWNNPEATAESI 424 (558)
T ss_pred chhhcCChHHHHhhc
Confidence 999999999887665
No 67
>TIGR02262 benz_CoA_lig benzoate-CoA ligase family. Characterized members of this protein family include benzoate-CoA ligase, 4-hydroxybenzoate-CoA ligase, 2-aminobenzoate-CoA ligase, etc. Members are related to fatty acid and acetate CoA ligases.
Probab=100.00 E-value=8.6e-48 Score=377.38 Aligned_cols=370 Identities=21% Similarity=0.334 Sum_probs=305.4
Q ss_pred hHHHhh-hccCCCCcEEEeCCCCCeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHHhCCeEeec
Q 014952 29 TYCFEN-ISQFADRPCIINGPTGDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGATSTTA 107 (415)
Q Consensus 29 ~~l~~~-a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l 107 (415)
+.+.++ ++.+|+++|+++. +..+||.||.++++++|+.|.+.|+++|++|+++++|+.+++++++||+++|++++|+
T Consensus 8 ~~~~~~~~~~~p~~~a~~~~--~~~~ty~~l~~~~~~~a~~L~~~g~~~g~~v~l~~~~~~~~~~~~~a~~~~G~~~v~l 85 (508)
T TIGR02262 8 DLLDRNVVEGRGGKTAFIDD--ISSLSYGELEAQVRRLGAALRRLGVKREERVLLLMLDGVDFPIAFLGAIRAGIVPVAL 85 (508)
T ss_pred HHHHHHHhcccCCceEEEeC--CceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHcCcEEeec
Confidence 445554 5779999999986 7899999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHhcCceEEEEcccchHHHHhhhhhcC--ceEEEeCCCCCCccchhhhhhhcccCCCCcccCCCCCeE
Q 014952 108 NPFYTPPEIAKQAIASKAKIIITQAVYNDKVRDLSEHHG--ARIVTIDPPPENCLHFSELITQADENEIPAVKINPDDVV 185 (415)
Q Consensus 108 ~~~~~~~~~~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~--~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a 185 (415)
++.++.+++.++++.+++++++++.+..+.+.+...... ..++..+........+.++.. ............+++++
T Consensus 86 ~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~a 164 (508)
T TIGR02262 86 NTLLTADDYAYMLEDSRARVVFVSGELLPVIKAALGKSPHLEHRVVVGRPEAGEVQLAELLA-TESEQFKPAATQADDPA 164 (508)
T ss_pred cCCCCHHHHHHHHHhcCCeEEEEchhhHHHHHHHHhcCCCccEEEEeCCCCcccccHHHHhh-cCCCccCCCCCCCCCcE
Confidence 999999999999999999999999887776655433222 234444433333344444422 22222223345678999
Q ss_pred EEecCCCCCCCCceeeechHHHHHHHhhhhcCCCCCccCCCCcEEEEccchHHHHhhHHHHHHHHHcCcEEEEcCC-CCH
Q 014952 186 ALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIMQK-FDI 264 (415)
Q Consensus 186 ~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~l~~l~~G~~~v~~~~-~~~ 264 (415)
+|+|||||||.||+|.++|+++.......... .+.+.++++++...|++|..++...++.++..|+++++.++ +++
T Consensus 165 ~i~~TSGTTG~PK~v~~s~~~~~~~~~~~~~~---~~~~~~~d~~l~~~p~~~~~~~~~~~~~~l~~G~~~~~~~~~~~~ 241 (508)
T TIGR02262 165 FWLYSSGSTGMPKGVVHTHSNPYWTAELYARN---TLGIREDDVVFSAAKLFFAYGLGNALTFPMSVGATTVLMGERPTP 241 (508)
T ss_pred EEEeCCCCCCCCcEEEEechhHHHHHHHHhHH---hcCCCCCCEEEEcCchHHHHHHHHHHHHHHHcCceEEEeCCCCCH
Confidence 99999999999999999999998766542221 34678899999999999999987667788999999988764 689
Q ss_pred HHHHHHHHhcCceeeecchHHHHHHHcCCCCCCCCcccceeeeecCCCCCHHHHHHHHhhCCCCccccccccccCCcccc
Q 014952 265 VKLMELVQKYKVTVAPFVPPIVLAVAKSGDVDKYDMSSIRTVMSGAAPMGKELEDAVRAKLPHAKLGQGYGMTEAGPVLS 344 (415)
Q Consensus 265 ~~~~~~l~~~~~t~l~~~p~~l~~l~~~~~~~~~~l~~lr~v~~gG~~l~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~ 344 (415)
..+++.|+++++|++.++|.++..+++........+.++|.+++||+++++++.+.+.+.| ++++++.||+||++++..
T Consensus 242 ~~~~~~i~~~~~t~~~~~P~~~~~~~~~~~~~~~~~~~l~~~~~~G~~l~~~~~~~~~~~~-~~~v~~~YG~tE~~~~~~ 320 (508)
T TIGR02262 242 DAVFDRLRRHQPTIFYGVPTLYAAMLADPNLPAEDQVRLRLCTSAGEALPAEVGQRWQARF-GVDIVDGIGSTEMLHIFL 320 (508)
T ss_pred HHHHHHHHHHCCcEEecchHHHHHHhcCccccccccccceeEEEcCCCCCHHHHHHHHHHh-CCchhhCccccccCceee
Confidence 9999999999999999999999888776544444567999999999999999999999999 889999999999997554
Q ss_pred ccccccCCccccCCCcccccccCCeEEEEeCCCCCCCCCCCceeEEEecCccccccccCCcceeeee
Q 014952 345 MCLAFAKEPFEIKSGACGTVVRNAEMKIVDPDTGISLPRNQAGEICIRGAQIMKGTYHIYAPFLLSI 411 (415)
Q Consensus 345 ~~~~~~~~~~~~~~~~~G~p~~~~~v~i~d~~~~~~~~~g~~Gel~v~~~~~~~gY~~~~~~~~~~~ 411 (415)
.+ .......+++|+|+++++++|+| +++++++.|+.|||+++|+.++.||+++|+.+...|
T Consensus 321 ~~-----~~~~~~~~~~G~~~~g~~v~i~d-~~~~~~~~g~~Gel~i~~~~~~~gY~~~~~~~~~~~ 381 (508)
T TIGR02262 321 SN-----LPGDVRYGTSGKPVPGYRLRLVG-DGGQDVAAGEPGELLISGPSSATMYWNNRAKTRDTF 381 (508)
T ss_pred cC-----CccCCCCCCcCCCCCCcEEEEEC-CCCCCCCCCCeeEEEEecCccccccCCCHHHhHhhh
Confidence 33 12233467899999999999999 779999999999999999999999999998876544
No 68
>PRK12467 peptide synthase; Provisional
Probab=100.00 E-value=9.3e-49 Score=451.31 Aligned_cols=371 Identities=22% Similarity=0.290 Sum_probs=312.2
Q ss_pred CCCCCHHhHHHhhhccCCCCcEEEeCCCCCeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHHhC
Q 014952 22 PNHLPLHTYCFENISQFADRPCIINGPTGDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIG 101 (415)
Q Consensus 22 ~~~~tl~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G 101 (415)
+...++++.|.+.++++|+++|+++. ++.+||+||.++++++|+.|+++|+++|++|+++++++.++++++|||+++|
T Consensus 1571 ~~~~~~~~~~~~~a~~~p~~~Av~~~--~~~lTY~eL~~~a~~lA~~L~~~Gv~~~~~V~l~~~~s~~~vv~~lavlkaG 1648 (3956)
T PRK12467 1571 PLARLVHQLIEDQAAATPEAVALVFG--EQELTYGELNRRANRLAHRLIALGVGPEVLVGIAVERSLEMVVGLLAILKAG 1648 (3956)
T ss_pred CccccHHHHHHHHHHhCCCCeEEEeC--CcEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEccCCHHHHHHHHHhhccC
Confidence 44578999999999999999999997 8899999999999999999999999999999999999999999999999999
Q ss_pred CeEeecCCCCCHHHHHHHHHhcCceEEEEcccchHHHHhhhhhcCceEEEeCCCCCCccchhhhhhhcccCCCCcccCCC
Q 014952 102 ATSTTANPFYTPPEIAKQAIASKAKIIITQAVYNDKVRDLSEHHGARIVTIDPPPENCLHFSELITQADENEIPAVKINP 181 (415)
Q Consensus 102 ~~~v~l~~~~~~~~~~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 181 (415)
++++|++|.++.+++.++++++++++++++......+... ....++.++... ++ ........+.....+
T Consensus 1649 ~~~vpldp~~p~~rl~~il~~~~~~~~l~~~~~~~~~~~~---~~~~~~~~~~~~-------~~-~~~~~~~~~~~~~~~ 1717 (3956)
T PRK12467 1649 GAYVPLDPEYPRERLAYMIEDSGIELLLTQSHLQARLPLP---DGLRSLVLDQED-------DW-LEGYSDSNPAVNLAP 1717 (3956)
T ss_pred ceeeecCCCCCHHHHHHHHHhCCCCEEEeChhhhhhCccc---cCCcEEEecccc-------ch-hccCCCCCCCCCCCC
Confidence 9999999999999999999999999999987654433211 123444443211 11 111111222334567
Q ss_pred CCeEEEecCCCCCCCCceeeechHHHHHHHhhhhcCCCCCccCCCCcEEEEccchHHHHhhHHHHHHHHHcCcEEEEcCC
Q 014952 182 DDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIMQK 261 (415)
Q Consensus 182 ~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~l~~l~~G~~~v~~~~ 261 (415)
+++++|+|||||||.||||+++|+++.+.+.+... .+.++++++++...|++|..+.+ .++.++..|+++++.++
T Consensus 1718 ~~~ayiiyTSGSTG~PKGV~~th~~l~~~~~~~~~----~~~~~~~d~~l~~~~~~fd~~~~-~~~~~L~~G~~lvi~~~ 1792 (3956)
T PRK12467 1718 QNLAYVIYTSGSTGRPKGAGNRHGALVNRLCATQE----AYQLSAADVVLQFTSFAFDVSVW-ELFWPLINGARLVIAPP 1792 (3956)
T ss_pred cCcEEEEECCCcCCCCCEEEEcCHHHHHHHHHHHH----hcCCCcccEEEEecCccHHHHHH-HHHHHHhCCCEEEEcCh
Confidence 89999999999999999999999999998887776 45678899999999999999987 58899999999999864
Q ss_pred ---CCHHHHHHHHHhcCceeeecchHHHHHHHcCCCCCCCCcccceeeeecCCCCCHHHHHHHHhhCCCCcccccccccc
Q 014952 262 ---FDIVKLMELVQKYKVTVAPFVPPIVLAVAKSGDVDKYDMSSIRTVMSGAAPMGKELEDAVRAKLPHAKLGQGYGMTE 338 (415)
Q Consensus 262 ---~~~~~~~~~l~~~~~t~l~~~p~~l~~l~~~~~~~~~~l~~lr~v~~gG~~l~~~~~~~~~~~~~~~~~~~~YG~tE 338 (415)
.++..+++.++++++|++.++|+++..|.+... ....+++||.+++||++++.++.+++.+.+++.+++|.||+||
T Consensus 1793 ~~~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~~-~~~~~~~lr~v~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE 1871 (3956)
T PRK12467 1793 GAHRDPEQLIQLIERQQVTTLHFVPSMLQQLLQMDE-QVEHPLSLRRVVCGGEALEVEALRPWLERLPDTGLFNLYGPTE 1871 (3956)
T ss_pred hhcCCHHHHHHHHHHcCCeEEECCHHHHHHHHhhcc-ccccCCCceEEEEccccCCHHHHHHHHHhCCCCeEEeCccCCc
Confidence 578999999999999999999999999987422 2345789999999999999999999999987888999999999
Q ss_pred CCccccccccccCCccccCCCcccccccCCeEEEEeCCCCCCCCCCCceeEEEecCccccccccCCcceeeeee
Q 014952 339 AGPVLSMCLAFAKEPFEIKSGACGTVVRNAEMKIVDPDTGISLPRNQAGEICIRGAQIMKGTYHIYAPFLLSIV 412 (415)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~G~p~~~~~v~i~d~~~~~~~~~g~~Gel~v~~~~~~~gY~~~~~~~~~~~~ 412 (415)
++..++...............++|+|+++++++|+| +++++++.|..|||+|+|+.+++||+++|+.|..+|+
T Consensus 1872 ~t~~~t~~~~~~~~~~~~~~~~iG~p~~~~~~~vld-~~~~~vp~G~~GEl~i~G~~v~~GYl~~p~~t~~~f~ 1944 (3956)
T PRK12467 1872 TAVDVTHWTCRRKDLEGRDSVPIGQPIANLSTYILD-ASLNPVPIGVAGELYLGGVGLARGYLNRPALTAERFV 1944 (3956)
T ss_pred CEEeEEEEeccccccccCCCCCcccccCCCEEEEEC-CCCCCCCCCCceEEEeccccccccccCChhhhhhhCc
Confidence 986544332111111222356899999999999999 5699999999999999999999999999999999986
No 69
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=100.00 E-value=1.9e-48 Score=421.06 Aligned_cols=365 Identities=21% Similarity=0.271 Sum_probs=307.0
Q ss_pred CCHHhHHHhhhccCCCCcEEEeCCCCCeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHHhCCeE
Q 014952 25 LPLHTYCFENISQFADRPCIINGPTGDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGATS 104 (415)
Q Consensus 25 ~tl~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~ 104 (415)
.++.+.|.+.++++|+++|+++. ++.+||+||.++++++|+.|.++|+++||+|+++++++.+++++++||+++|+++
T Consensus 458 ~~l~~~~~~~~~~~p~~~Al~~~--~~~~Ty~eL~~~~~~la~~L~~~g~~~g~~V~l~~~~~~~~i~~~la~~~~G~~~ 535 (1296)
T PRK10252 458 TTLSALVAQQAAKTPDAPALADA--RYQFSYREMREQVVALANLLRERGVKPGDSVAVALPRSVFLTLALHAIVEAGAAW 535 (1296)
T ss_pred CCHHHHHHHHHHhCCCCeEEEcC--CCcEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHHHHhCCEE
Confidence 68999999999999999999997 7899999999999999999999999999999999999999999999999999999
Q ss_pred eecCCCCCHHHHHHHHHhcCceEEEEcccchHHHHhhhhhcCceEEEeCCCCCCccchhhhhhhcccCCCCcccCCCCCe
Q 014952 105 TTANPFYTPPEIAKQAIASKAKIIITQAVYNDKVRDLSEHHGARIVTIDPPPENCLHFSELITQADENEIPAVKINPDDV 184 (415)
Q Consensus 105 v~l~~~~~~~~~~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 184 (415)
+|++|.++.+++.++++++++++++++.+....+... .....+..+. . .. .....+.....++++
T Consensus 536 vpld~~~p~~~~~~~l~~~~~~~~i~~~~~~~~~~~~---~~~~~~~~~~----------~-~~-~~~~~~~~~~~~~~~ 600 (1296)
T PRK10252 536 LPLDTGYPDDRLKMMLEDARPSLLITTADQLPRFADV---PDLTSLCYNA----------P-LA-PQGAAPLQLSQPHHT 600 (1296)
T ss_pred EecCccCHHHHHHHHHHhCCCCEEEECcchhhhcccC---CCceeeeccc----------c-cc-cccCCCCCCCCCCCe
Confidence 9999999999999999999999999988765544321 1122222211 0 00 001111223357899
Q ss_pred EEEecCCCCCCCCceeeechHHHHHHHhhhhcCCCCCccCCCCcEEEEccchHHHHhhHHHHHHHHHcCcEEEEcCC---
Q 014952 185 VALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIMQK--- 261 (415)
Q Consensus 185 a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~l~~l~~G~~~v~~~~--- 261 (415)
++|+|||||||.||||+++|+++.+.+.+... .+.+.++++++...|++|..+++ .++.++..|+++++.++
T Consensus 601 a~i~~TSGSTG~PKgV~~~h~~l~~~~~~~~~----~~~~~~~d~~l~~~~~~fd~~~~-~~~~~l~~G~~l~~~~~~~~ 675 (1296)
T PRK10252 601 AYIIFTSGSTGRPKGVMVGQTAIVNRLLWMQN----HYPLTADDVVLQKTPCSFDVSVW-EFFWPFIAGAKLVMAEPEAH 675 (1296)
T ss_pred EEEEECCCCCCCCCEEEeccHHHHHHHHHHHH----hcCCCCCCEEEEeCCcchhhhHH-HHHHHHhCCCEEEECChhcc
Confidence 99999999999999999999999998888777 55688999999999999998887 57889999999999863
Q ss_pred CCHHHHHHHHHhcCceeeecchHHHHHHHcCCCCCC--CCcccceeeeecCCCCCHHHHHHHHhhCCCCccccccccccC
Q 014952 262 FDIVKLMELVQKYKVTVAPFVPPIVLAVAKSGDVDK--YDMSSIRTVMSGAAPMGKELEDAVRAKLPHAKLGQGYGMTEA 339 (415)
Q Consensus 262 ~~~~~~~~~l~~~~~t~l~~~p~~l~~l~~~~~~~~--~~l~~lr~v~~gG~~l~~~~~~~~~~~~~~~~~~~~YG~tE~ 339 (415)
.++..+.+.++++++|++.++|+++..+++...... ..++++|.+++||+++++++.+++.+.+ +.++++.||+||+
T Consensus 676 ~~~~~~~~~i~~~~vt~~~~~Ps~l~~l~~~~~~~~~~~~~~~lr~i~~gGe~l~~~~~~~~~~~~-~~~l~n~YG~TE~ 754 (1296)
T PRK10252 676 RDPLAMQQFFAEYGVTTTHFVPSMLAAFVASLTPEGARQSCASLRQVFCSGEALPADLCREWQQLT-GAPLHNLYGPTEA 754 (1296)
T ss_pred CCHHHHHHHHHHcCCeEEEeCHHHHHHHHhhhccccccccCCCccEEEEecCCCCHHHHHHHHhcC-CCEEEeCCCcchh
Confidence 589999999999999999999999998887643322 3468999999999999999999999987 8899999999999
Q ss_pred CccccccccccCC--ccccCCCcccccccCCeEEEEeCCCCCCCCCCCceeEEEecCccccccccCCcceeeeeee
Q 014952 340 GPVLSMCLAFAKE--PFEIKSGACGTVVRNAEMKIVDPDTGISLPRNQAGEICIRGAQIMKGTYHIYAPFLLSIVC 413 (415)
Q Consensus 340 ~~~~~~~~~~~~~--~~~~~~~~~G~p~~~~~v~i~d~~~~~~~~~g~~Gel~v~~~~~~~gY~~~~~~~~~~~~~ 413 (415)
+..++........ .......++|+|+++++++|+| +++++++.|+.|||+|+|+.+++||+++|+.+.++|+.
T Consensus 755 ~~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~i~d-~~~~~~~~g~~Gel~i~g~~~~~GY~~~~~~t~~~f~~ 829 (1296)
T PRK10252 755 AVDVSWYPAFGEELAAVRGSSVPIGYPVWNTGLRILD-ARMRPVPPGVAGDLYLTGIQLAQGYLGRPDLTASRFIA 829 (1296)
T ss_pred hheeeeeecccccccccCCCCCCcccccCCCEEEEEC-CCCCCCCCCCceEEEecccccchhhCCCcccchhhccc
Confidence 8655443211111 0123356799999999999999 66999999999999999999999999999999998864
No 70
>PRK03584 acetoacetyl-CoA synthetase; Provisional
Probab=100.00 E-value=1.5e-47 Score=385.81 Aligned_cols=378 Identities=21% Similarity=0.232 Sum_probs=297.1
Q ss_pred CCCCCCCCCCCHHhHHHhhhccCCCCcEEEeCCC---CCeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHH
Q 014952 16 LPDIYIPNHLPLHTYCFENISQFADRPCIINGPT---GDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVF 92 (415)
Q Consensus 16 ~~~~~~~~~~tl~~~l~~~a~~~p~~~a~~~~~~---~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~ 92 (415)
++.|.....+|+.+.+.++ .+|+++|+++.+. .+++||+||.++++++|+.|+++|+++||+|+++++|++++++
T Consensus 77 ~~~wf~~~~~n~~~~~~~~--~~~~~~Al~~~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~v~ 154 (655)
T PRK03584 77 GARWFPGARLNYAENLLRH--RRDDRPAIIFRGEDGPRRELSWAELRRQVAALAAALRALGVGPGDRVAAYLPNIPETVV 154 (655)
T ss_pred CCeeCCCCEeeHHHHhhcc--CCCCCeEEEEECCCCceEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHH
Confidence 3566666678888888764 6799999987532 2689999999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCeEeecCCCCCHHHHHHHHHhcCceEEEEcccch---------HHHHhhhhhcC--ceEEEeCCC------
Q 014952 93 AFLGASYIGATSTTANPFYTPPEIAKQAIASKAKIIITQAVYN---------DKVRDLSEHHG--ARIVTIDPP------ 155 (415)
Q Consensus 93 ~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~vl~~~~~~---------~~~~~~~~~~~--~~~i~~~~~------ 155 (415)
++|||+++|++++|+++.++.+++.++++.++++++|+++... +.+........ ..++.++..
T Consensus 155 ~~lA~~~~Gav~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 234 (655)
T PRK03584 155 AMLATASLGAIWSSCSPDFGVQGVLDRFGQIEPKVLIAVDGYRYGGKAFDRRAKVAELRAALPSLEHVVVVPYLGPAAAA 234 (655)
T ss_pred HHHHHHHcCcEEEeeCCCCCHHHHHHHHHHcCCcEEEEccccccCCcccchHHHHHHHHhcCCCccEEEEEecCCCcccc
Confidence 9999999999999999999999999999999999999976532 22332222211 234444321
Q ss_pred --CCCccchhhhhhhcccCCCCcccCCCCCeEEEecCCCCCCCCceeeechHHHHHH-HhhhhcCCCCCccCCCCcEEEE
Q 014952 156 --PENCLHFSELITQADENEIPAVKINPDDVVALPYSSGTTGLPKGVMLTHKGLVTS-VAQQVDGENPNLYLHKEDVILC 232 (415)
Q Consensus 156 --~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~ 232 (415)
......++++................+++++|+|||||||.||||+++|.+++.+ ...... .+.+.++|++++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ilyTSGTTG~PKgV~~sh~~~~~~~~~~~~~----~~~~~~~d~~~~ 310 (655)
T PRK03584 235 AALPGALLWEDFLAPAEAAELEFEPVPFDHPLWILYSSGTTGLPKCIVHGHGGILLEHLKELGL----HCDLGPGDRFFW 310 (655)
T ss_pred cccCCcccHHHHhhccccCCCCceecCCCCcEEEEecCCCCCCCceEEECccHHHHHHHHHHHH----hcCCCCCCEEEE
Confidence 1123445555321222223334566789999999999999999999999987643 333333 345788999999
Q ss_pred ccchHHHHhhHHHHHHHHHcCcEEEEcCC----CCHHHHHHHHHhcCceeeecchHHHHHHHcCCC--CCCCCcccceee
Q 014952 233 VLPLFHIYSLNSVLLCALRVGAAILIMQK----FDIVKLMELVQKYKVTVAPFVPPIVLAVAKSGD--VDKYDMSSIRTV 306 (415)
Q Consensus 233 ~~pl~~~~g~~~~~l~~l~~G~~~v~~~~----~~~~~~~~~l~~~~~t~l~~~p~~l~~l~~~~~--~~~~~l~~lr~v 306 (415)
..++.|..+. .++.++..|+++++.+. .++..+++.++++++|++.++|.++..+.+... ....++++||.+
T Consensus 311 ~~~~~~~~~~--~~~~~L~~G~t~vl~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~l~sLr~i 388 (655)
T PRK03584 311 YTTCGWMMWN--WLVSGLLVGATLVLYDGSPFYPDPNVLWDLAAEEGVTVFGTSAKYLDACEKAGLVPGETHDLSALRTI 388 (655)
T ss_pred cCCchHHhHH--HHHHHHHcCCEEEEeCCCCCCCCHHHHHHHHHHHCCEEEEcCHHHHHHHHhcCCCccccCChhheEEE
Confidence 9999887653 36789999999999752 589999999999999999999999998876532 234678999999
Q ss_pred eecCCCCCHHHHHHHHhhC-CCCccccccccccCCccccccccccCCccccCCCcccccccCCeEEEEeCCCCCCCCCCC
Q 014952 307 MSGAAPMGKELEDAVRAKL-PHAKLGQGYGMTEAGPVLSMCLAFAKEPFEIKSGACGTVVRNAEMKIVDPDTGISLPRNQ 385 (415)
Q Consensus 307 ~~gG~~l~~~~~~~~~~~~-~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~G~p~~~~~v~i~d~~~~~~~~~g~ 385 (415)
++||+++++++.+++.+.+ ++..+.+.||+||+++..... .......++++|+|++|++++|+| ++|+++ .|+
T Consensus 389 ~~~Ge~l~~~~~~~~~~~~~~~~~~~~~yG~TE~~~~~~~~----~~~~~~~~g~~g~p~~g~~~~ivd-~~g~~~-~g~ 462 (655)
T PRK03584 389 GSTGSPLPPEGFDWVYEHVKADVWLASISGGTDICSCFVGG----NPLLPVYRGEIQCRGLGMAVEAWD-EDGRPV-VGE 462 (655)
T ss_pred EEecCCCCHHHHHHHHHHhCCCceEEeccChHhhhcccccC----CCCCCcCCCccCCCcCCceeEEEC-CCCCCC-CCC
Confidence 9999999999999999998 357899999999986433221 111234568899999999999999 558888 899
Q ss_pred ceeEEEecC--ccccccccCCcce
Q 014952 386 AGEICIRGA--QIMKGTYHIYAPF 407 (415)
Q Consensus 386 ~Gel~v~~~--~~~~gY~~~~~~~ 407 (415)
.|||+|+|| +++.|||++|+.+
T Consensus 463 ~GeL~v~gp~p~~~~gy~~~~~~~ 486 (655)
T PRK03584 463 VGELVCTKPFPSMPLGFWNDPDGS 486 (655)
T ss_pred ceEEEEccCCCCCcceeeCCCccc
Confidence 999999996 7999999999753
No 71
>PRK06188 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.6e-47 Score=376.86 Aligned_cols=375 Identities=23% Similarity=0.369 Sum_probs=307.3
Q ss_pred CCCHHhHHHhhhccCCCCcEEEeCCCCCeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHHhCCe
Q 014952 24 HLPLHTYCFENISQFADRPCIINGPTGDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGAT 103 (415)
Q Consensus 24 ~~tl~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~ 103 (415)
+.|+.++|.++++++|+++|+++. ++.+||.||.++++++|+.|.+.|+++|++|+++++|+.+++++++||+++|++
T Consensus 11 ~~~~~~~~~~~~~~~~~~~a~~~~--~~~~Ty~~l~~~~~~~a~~L~~~gv~~~~~V~i~~~~~~~~~~~~la~~~~G~~ 88 (524)
T PRK06188 11 GATYGHLLVSALKRYPDRPALVLG--DTRLTYGQLADRISRYIQAFEALGLGTGDAVALLSLNRPEVLMAIGAAQLAGLR 88 (524)
T ss_pred CccHHHHHHHHHHHCCCCeEEEEC--CCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHhCCE
Confidence 468999999999999999999997 789999999999999999999999999999999999999999999999999999
Q ss_pred EeecCCCCCHHHHHHHHHhcCceEEEEccc-chHHHHhhhhhcC--ceEEEeCCCCCCccchhhhhhhcccCCCCcccCC
Q 014952 104 STTANPFYTPPEIAKQAIASKAKIIITQAV-YNDKVRDLSEHHG--ARIVTIDPPPENCLHFSELITQADENEIPAVKIN 180 (415)
Q Consensus 104 ~v~l~~~~~~~~~~~~l~~~~~~~vl~~~~-~~~~~~~~~~~~~--~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 180 (415)
++|++|..+.+++..++..++++.+++++. ............. ..++.++..... ..+.+....... ........
T Consensus 89 ~v~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~ 166 (524)
T PRK06188 89 RTALHPLGSLDDHAYVLEDAGISTLIVDPAPFVERALALLARVPSLKHVLTLGPVPDG-VDLLAAAAKFGP-APLVAAAL 166 (524)
T ss_pred EEecccCCCHHHHHHHHHhcCceEEEEecchhhHHHHHHhhhcCCceEEEEeCCccch-hhHHHhhhccCc-ccccccCC
Confidence 999999999999999999999999999876 3333333222111 223433322111 111111011111 11111223
Q ss_pred CCCeEEEecCCCCCCCCceeeechHHHHHHHhhhhcCCCCCccCCCCcEEEEccchHHHHhhHHHHHHHHHcCcEEEEcC
Q 014952 181 PDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIMQ 260 (415)
Q Consensus 181 ~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~l~~l~~G~~~v~~~ 260 (415)
++++++|+|||||||.||+|.++|.++......... .+.+..+++++...|++|..++. ++.++..|+++++.+
T Consensus 167 ~~~~a~i~~TSGtTG~pk~v~~s~~~l~~~~~~~~~----~~~~~~~~~~l~~~pl~~~~g~~--~~~~l~~G~~~~~~~ 240 (524)
T PRK06188 167 PPDIAGLAYTGGTTGKPKGVMGTHRSIATMAQIQLA----EWEWPADPRFLMCTPLSHAGGAF--FLPTLLRGGTVIVLA 240 (524)
T ss_pred CCCeEEEEeCCCCCCCCceeeeehHHHHHHHHHHHh----hcCCCcCcEEEEecCchhhhhHH--HHHHHHcCCEEEEcC
Confidence 466999999999999999999999999988877766 45678899999999999998875 578899999999999
Q ss_pred CCCHHHHHHHHHhcCceeeecchHHHHHHHcCCCCCCCCcccceeeeecCCCCCHHHHHHHHhhCCCCccccccccccCC
Q 014952 261 KFDIVKLMELVQKYKVTVAPFVPPIVLAVAKSGDVDKYDMSSIRTVMSGAAPMGKELEDAVRAKLPHAKLGQGYGMTEAG 340 (415)
Q Consensus 261 ~~~~~~~~~~l~~~~~t~l~~~p~~l~~l~~~~~~~~~~l~~lr~v~~gG~~l~~~~~~~~~~~~~~~~~~~~YG~tE~~ 340 (415)
.+++..+++.++++++|+++++|.++..+++........++++|.+++||++++++..+.+.+.+ +..+++.||+||++
T Consensus 241 ~~~~~~~~~~i~~~~~t~~~~~P~~l~~l~~~~~~~~~~l~~lr~~~~gg~~~~~~~~~~~~~~~-~~~~~~~YG~tE~~ 319 (524)
T PRK06188 241 KFDPAEVLRAIEEQRITATFLVPTMIYALLDHPDLRTRDLSSLETVYYGASPMSPVRLAEAIERF-GPIFAQYYGQTEAP 319 (524)
T ss_pred CCCHHHHHHHHHHhCCEEEEehHHHHHHHHhCcCccCCCCcceeEEEEcCCCCCHHHHHHHHHHh-CchhhheeCccccC
Confidence 99999999999999999999999999999988776667889999999999999999999999888 78899999999997
Q ss_pred ccccccccccC-CccccCCCcccccccCCeEEEEeCCCCCCCCCCCceeEEEecCccccccccCCcceeee
Q 014952 341 PVLSMCLAFAK-EPFEIKSGACGTVVRNAEMKIVDPDTGISLPRNQAGEICIRGAQIMKGTYHIYAPFLLS 410 (415)
Q Consensus 341 ~~~~~~~~~~~-~~~~~~~~~~G~p~~~~~v~i~d~~~~~~~~~g~~Gel~v~~~~~~~gY~~~~~~~~~~ 410 (415)
..++....... ........++|+|+|+++++|+|++ +++++.|+.|||+++|+.++.||+++++.+...
T Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~G~p~~g~~v~i~~~~-~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~ 389 (524)
T PRK06188 320 MVITYLRKRDHDPDDPKRLTSCGRPTPGLRVALLDED-GREVAQGEVGEICVRGPLVMDGYWNRPEETAEA 389 (524)
T ss_pred CceeecCchhccccccccCCccccccCCcEEEEEcCC-CCCCCCCCeeEEEEECcchhhhhcCChHHhhhh
Confidence 65554321111 1123456789999999999999955 999999999999999999999999998876544
No 72
>PLN03052 acetate--CoA ligase; Provisional
Probab=100.00 E-value=1.8e-47 Score=385.69 Aligned_cols=376 Identities=22% Similarity=0.229 Sum_probs=292.0
Q ss_pred CCCCCCCCCHHhHHHhh-hccCCCCcEEEeCCCC------CeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhH
Q 014952 18 DIYIPNHLPLHTYCFEN-ISQFADRPCIINGPTG------DVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQF 90 (415)
Q Consensus 18 ~~~~~~~~tl~~~l~~~-a~~~p~~~a~~~~~~~------~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~ 90 (415)
.|-....+|+.+.+.++ +.++|+++|+++.+.+ +.+||+||.++++++|+.|+++|+++||+|+++++|++++
T Consensus 167 ~wf~g~~ln~~~~~l~~~~~~~pd~~Ai~~~~e~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GdrVai~~pn~~e~ 246 (728)
T PLN03052 167 QWLPGAVLNVAECCLTPKPSKTDDSIAIIWRDEGSDDLPVNRMTLSELRSQVSRVANALDALGFEKGDAIAIDMPMNVHA 246 (728)
T ss_pred EECCCCEeEHHHHHHHHHhccCCCCeEEEEECCCCCCCceEEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHH
Confidence 45555568887765544 4678999999976432 4899999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCeEeecCCCCCHHHHHHHHHhcCceEEEEcccch------HHHHhhhhhcCceEEEeCCCC--------
Q 014952 91 VFAFLGASYIGATSTTANPFYTPPEIAKQAIASKAKIIITQAVYN------DKVRDLSEHHGARIVTIDPPP-------- 156 (415)
Q Consensus 91 ~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~vl~~~~~~------~~~~~~~~~~~~~~i~~~~~~-------- 156 (415)
++++|||+++|++++|++|.++.+++.+++++++++++|+++... +....+......+++.+....
T Consensus 247 via~LA~~~~Gav~vpi~p~~~~~~l~~rl~~~~~k~lit~d~~~~~gk~~~~~~~~~~~~~~~~iv~~~~~~~~~~~~~ 326 (728)
T PLN03052 247 VIIYLAIILAGCVVVSIADSFAPSEIATRLKISKAKAIFTQDVIVRGGKSIPLYSRVVEAKAPKAIVLPADGKSVRVKLR 326 (728)
T ss_pred HHHHHHHHHcCCEEEeeCCCCCHHHHHHHHHhcCceEEEEcCccccCCcccchHHHHHHhcCCcEEEEeCCCCccccccc
Confidence 999999999999999999999999999999999999999986532 111222111122333333211
Q ss_pred CCccchhhhhhhcc----cCCCCcccCCCCCeEEEecCCCCCCCCceeeechHHHHHHHhhhhcCCCCCccCCCCcEEEE
Q 014952 157 ENCLHFSELITQAD----ENEIPAVKINPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILC 232 (415)
Q Consensus 157 ~~~~~~~~l~~~~~----~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (415)
.....+++++.... ....+.....++++++|+|||||||.||||+++|.+++........ .+++.++|+++.
T Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~a~IlyTSGTTG~PKgVv~sh~~~l~~~~~~~~----~~~l~~~d~~~~ 402 (728)
T PLN03052 327 EGDMSWDDFLARANGLRRPDEYKAVEQPVEAFTNILFSSGTTGEPKAIPWTQLTPLRAAADAWA----HLDIRKGDIVCW 402 (728)
T ss_pred cCCccHHHHHhccccccccccccccccCCCCcEEEEecCCCCCCCceEEECchHHHHHHHHHHH----hcCCCCCcEEEE
Confidence 12234555522211 1111222335689999999999999999999999988766554443 335788999999
Q ss_pred ccchHHHHhhHHHHHHHHHcCcEEEEcCC-CCHHHHHHHHHhcCceeeecchHHHHHHHcCCCCCCCCcccceeeeecCC
Q 014952 233 VLPLFHIYSLNSVLLCALRVGAAILIMQK-FDIVKLMELVQKYKVTVAPFVPPIVLAVAKSGDVDKYDMSSIRTVMSGAA 311 (415)
Q Consensus 233 ~~pl~~~~g~~~~~l~~l~~G~~~v~~~~-~~~~~~~~~l~~~~~t~l~~~p~~l~~l~~~~~~~~~~l~~lr~v~~gG~ 311 (415)
..|++|+++.+ .++.++..|+++++.+. .++..+++.++++++|++.++|++++.|.+....+..++++||.+.+||+
T Consensus 403 ~~~l~w~~g~~-~v~~~L~~Gat~vl~~g~p~~~~~~~~i~~~~vT~l~~~Pt~l~~l~~~~~~~~~dlssLr~i~s~Ge 481 (728)
T PLN03052 403 PTNLGWMMGPW-LVYASLLNGATLALYNGSPLGRGFAKFVQDAKVTMLGTVPSIVKTWKNTNCMAGLDWSSIRCFGSTGE 481 (728)
T ss_pred CCCcHHHhHHH-HHHHHHHhCCEEEEeCCCCCCChHHHHHHHHCCCEEEECHHHHHHHHhcCCcccCChhheeEEEecCC
Confidence 99999999986 57899999999999874 45678999999999999999999999998776556678999999999999
Q ss_pred CCCHHHHHHHHhhCCCCccccccccccCCccccccccccCCccccCCCcccccccCCeEEEEeCCCCCCCCCCC--ceeE
Q 014952 312 PMGKELEDAVRAKLPHAKLGQGYGMTEAGPVLSMCLAFAKEPFEIKSGACGTVVRNAEMKIVDPDTGISLPRNQ--AGEI 389 (415)
Q Consensus 312 ~l~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~G~p~~~~~v~i~d~~~~~~~~~g~--~Gel 389 (415)
+++++...++.+.++..++.+.||+||+++.+.... ......++++|+|++|++++|+| ++|++++.|+ .|||
T Consensus 482 ~l~~~~~~~~~~~~~~~~i~~~yG~TE~~~~~~~~~----~~~~~~~g~~g~p~~g~~v~v~d-~~g~~v~~g~~~~GEL 556 (728)
T PLN03052 482 ASSVDDYLWLMSRAGYKPIIEYCGGTELGGGFVTGS----LLQPQAFAAFSTPAMGCKLFILD-DSGNPYPDDAPCTGEL 556 (728)
T ss_pred CCCHHHHHHHHHhcCCCCeEeeccChhhCcccccCC----CCCCCCCCccccCCCCceEEEEC-CCCCCCCCCCCceEEE
Confidence 999999988888874467999999999986433221 11123567899999999999999 5699999985 6999
Q ss_pred EEecCcc--ccccccC
Q 014952 390 CIRGAQI--MKGTYHI 403 (415)
Q Consensus 390 ~v~~~~~--~~gY~~~ 403 (415)
+++++.. ..+|+++
T Consensus 557 ~v~~~~~~~~~~~~~~ 572 (728)
T PLN03052 557 ALFPLMFGASSTLLNA 572 (728)
T ss_pred EEeCCCCCCCccccCc
Confidence 9986533 3455554
No 73
>PRK12316 peptide synthase; Provisional
Probab=100.00 E-value=1.7e-48 Score=455.61 Aligned_cols=370 Identities=22% Similarity=0.290 Sum_probs=313.3
Q ss_pred CCCCCHHhHHHhhhccCCCCcEEEeCCCCCeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHHhC
Q 014952 22 PNHLPLHTYCFENISQFADRPCIINGPTGDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIG 101 (415)
Q Consensus 22 ~~~~tl~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G 101 (415)
|...++++.+.++++++|+++|+++. ++.+||+||.++++++|+.|+++|+++|++|+|+++|+.++++++|||+++|
T Consensus 4548 ~~~~~~~~l~~~~a~~~p~~~Av~~~--~~~lTY~eL~~~~~~lA~~L~~~gv~~g~~V~i~~~~s~~~iv~~lavl~aG 4625 (5163)
T PRK12316 4548 PATRCVHQLVAERARMTPDAVAVVFD--EEKLTYAELNRRANRLAHALIARGVGPEVLVGIAMERSAEMMVGLLAVLKAG 4625 (5163)
T ss_pred CccccHHHHHHHHHHhCCCCeEEEeC--CceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHHHHhC
Confidence 45679999999999999999999987 7899999999999999999999999999999999999999999999999999
Q ss_pred CeEeecCCCCCHHHHHHHHHhcCceEEEEcccchHHHHhhhhhcCceEEEeCCCCCCccchhhhhhhcccCCCCcccCCC
Q 014952 102 ATSTTANPFYTPPEIAKQAIASKAKIIITQAVYNDKVRDLSEHHGARIVTIDPPPENCLHFSELITQADENEIPAVKINP 181 (415)
Q Consensus 102 ~~~v~l~~~~~~~~~~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 181 (415)
++++|++|.++.+++.+++++++++++|++....+.+... .....+.++... ++ .......+.....+
T Consensus 4626 ~~~vpldp~~p~~rl~~il~~~~~~~vl~~~~~~~~~~~~---~~~~~~~~~~~~-------~~--~~~~~~~~~~~~~~ 4693 (5163)
T PRK12316 4626 GAYVPLDPEYPRERLAYMMEDSGAALLLTQSHLLQRLPIP---DGLASLALDRDE-------DW--EGFPAHDPAVRLHP 4693 (5163)
T ss_pred cEEecCCCCChHHHHHHHHHhcCCCEEEechhhhhhcccc---cCcceEeecchh-------hc--ccCCccCCccCCCC
Confidence 9999999999999999999999999999987655443211 122333333211 00 11111223345578
Q ss_pred CCeEEEecCCCCCCCCceeeechHHHHHHHhhhhcCCCCCccCCCCcEEEEccchHHHHhhHHHHHHHHHcCcEEEEcCC
Q 014952 182 DDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIMQK 261 (415)
Q Consensus 182 ~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~l~~l~~G~~~v~~~~ 261 (415)
++.++|+|||||||.||||+++|+++.+.+.+... .+.++++++++...|++|..+.. .++.++..|+++++.+.
T Consensus 4694 ~~~a~ii~TSGSTG~PKgV~~~h~~l~~~~~~~~~----~~~~~~~d~~l~~~~~~fd~~~~-~~~~~L~~G~~lvi~~~ 4768 (5163)
T PRK12316 4694 DNLAYVIYTSGSTGRPKGVAVSHGSLVNHLHATGE----RYELTPDDRVLQFMSFSFDGSHE-GLYHPLINGASVVIRDD 4768 (5163)
T ss_pred CceEEEEECCCCCCCCCEeeeccHHHHHHHHHHHH----hcCCCcCCeEEEecCcchhhHHH-HHHHHHhCCCEEEEcCc
Confidence 99999999999999999999999999998888776 55688999999999999999887 58899999999999874
Q ss_pred --CCHHHHHHHHHhcCceeeecchHHHHHHHcCCCCCCCCcccceeeeecCCCCCHHHHHHHHhhCCCCccccccccccC
Q 014952 262 --FDIVKLMELVQKYKVTVAPFVPPIVLAVAKSGDVDKYDMSSIRTVMSGAAPMGKELEDAVRAKLPHAKLGQGYGMTEA 339 (415)
Q Consensus 262 --~~~~~~~~~l~~~~~t~l~~~p~~l~~l~~~~~~~~~~l~~lr~v~~gG~~l~~~~~~~~~~~~~~~~~~~~YG~tE~ 339 (415)
+++..+++.++++++|++.++|+++..|.+...... ++++||.+++||+++++++.+++.+.++++++++.||+||+
T Consensus 4769 ~~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~~~~~-~~~~lr~v~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~ 4847 (5163)
T PRK12316 4769 SLWDPERLYAEIHEHRVTVLVFPPVYLQQLAEHAERDG-EPPSLRVYCFGGEAVAQASYDLAWRALKPVYLFNGYGPTET 4847 (5163)
T ss_pred ccCCHHHHHHHHHHcCCEEEEcCHHHHHHHHhhhcccc-CCCCccEEEEecccCCHHHHHHHHHhCCCCEEEecccCccc
Confidence 389999999999999999999999999987654332 67899999999999999999999988888999999999999
Q ss_pred CccccccccccCCccccCCCcccccccCCeEEEEeCCCCCCCCCCCceeEEEecCccccccccCCcceeeeee
Q 014952 340 GPVLSMCLAFAKEPFEIKSGACGTVVRNAEMKIVDPDTGISLPRNQAGEICIRGAQIMKGTYHIYAPFLLSIV 412 (415)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~G~p~~~~~v~i~d~~~~~~~~~g~~Gel~v~~~~~~~gY~~~~~~~~~~~~ 412 (415)
+..++...............++|+|+++++++|+| +++++++.|+.|||+|+||.+++|||++|+.|..+|+
T Consensus 4848 ~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~i~d-~~~~~~p~g~~GEl~i~G~~v~~GY~~~~~~t~~~f~ 4919 (5163)
T PRK12316 4848 TVTVLLWKARDGDACGAAYMPIGTPLGNRSGYVLD-GQLNPLPVGVAGELYLGGEGVARGYLERPALTAERFV 4919 (5163)
T ss_pred eEEEEEEEcccccccCCCCCcccccccCCEEEEEC-CCCCcCCCCCCceEEECCcccchhhcCChhhhhhhcc
Confidence 96555432111111224557899999999999999 5699999999999999999999999999999999885
No 74
>PRK06164 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.3e-47 Score=379.04 Aligned_cols=382 Identities=22% Similarity=0.291 Sum_probs=304.0
Q ss_pred CCCCCCCCHHhHHHhhhccCCCCcEEEeCCCCCeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHH
Q 014952 19 IYIPNHLPLHTYCFENISQFADRPCIINGPTGDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGAS 98 (415)
Q Consensus 19 ~~~~~~~tl~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~ 98 (415)
-+.+...++.+.|.+.++.+|+++|+++. ++.+||+||.++++++|+.|.+.|+++||+|+++++|+.+++++++||+
T Consensus 4 ~~~~~~~~l~~~l~~~a~~~p~~~a~~~~--~~~~Ty~~L~~~~~~~a~~L~~~g~~~g~~V~i~~~n~~~~~~~~la~~ 81 (540)
T PRK06164 4 DAAPRADTLASLLDAHARARPDAVALIDE--DRPLSRAELRALVDRLAAWLAAQGVRRGDRVAVWLPNCIEWVVLFLACA 81 (540)
T ss_pred ccccCCCCHHHHHHHHHHhCCCCeEEecC--CCcccHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCcHHHHHHHHHHH
Confidence 34556789999999999999999999975 7899999999999999999999999999999999999999999999999
Q ss_pred HhCCeEeecCCCCCHHHHHHHHHhcCceEEEEcccch-----HHHHhhhhh--cC-ceEEEeCCCCCCc-----cchhhh
Q 014952 99 YIGATSTTANPFYTPPEIAKQAIASKAKIIITQAVYN-----DKVRDLSEH--HG-ARIVTIDPPPENC-----LHFSEL 165 (415)
Q Consensus 99 ~~G~~~v~l~~~~~~~~~~~~l~~~~~~~vl~~~~~~-----~~~~~~~~~--~~-~~~i~~~~~~~~~-----~~~~~l 165 (415)
++|++++|+++..+.+++.++++++++++++++++.. +.+...... .. ..++.++...... ..+.++
T Consensus 82 ~~G~~~v~l~~~~~~~~l~~~i~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (540)
T PRK06164 82 RLGATVIAVNTRYRSHEVAHILGRGRARWLVVWPGFKGIDFAAILAAVPPDALPPLRAIAVVDDAADATPAPAPGARVQL 161 (540)
T ss_pred HhCcEEEecCCCCCcHHHHHHHHhcCccEEEEccccccccHHHHhhcccccccCCcceEEEeccCcccCCCCCccccccc
Confidence 9999999999999999999999999999999987642 222221111 11 2333343111000 000011
Q ss_pred hhhcccCCC---CcccCCCCCeEEEecCCCCCCCCceeeechHHHHHHHhhhhcCCCCCccCCCCcEEEEccchHHHHhh
Q 014952 166 ITQADENEI---PAVKINPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSL 242 (415)
Q Consensus 166 ~~~~~~~~~---~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~ 242 (415)
......... ......++++++++|||||||.||+|.++|+++......... .+.+.+++++++.+|++|.+|+
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~----~~~~~~~~~~l~~~p~~~~~g~ 237 (540)
T PRK06164 162 FALPDPAPPAAAGERAADPDAGALLFTTSGTTSGPKLVLHRQATLLRHARAIAR----AYGYDPGAVLLAALPFCGVFGF 237 (540)
T ss_pred ccccccCCcccccccCCCCCceEEEEECCCCCCCCcEEEEehHHHHHHHHHHHH----hcCCCCCCEEEEcCCchhHHHH
Confidence 000000000 012234688999999999999999999999999988877766 4457789999999999999999
Q ss_pred HHHHHHHHHcCcEEEEcCCCCHHHHHHHHHhcCceeeecchHHHHHHHcCCCCCCCCcccceeeeecC-CCCCHHHHHHH
Q 014952 243 NSVLLCALRVGAAILIMQKFDIVKLMELVQKYKVTVAPFVPPIVLAVAKSGDVDKYDMSSIRTVMSGA-APMGKELEDAV 321 (415)
Q Consensus 243 ~~~~l~~l~~G~~~v~~~~~~~~~~~~~l~~~~~t~l~~~p~~l~~l~~~~~~~~~~l~~lr~v~~gG-~~l~~~~~~~~ 321 (415)
. .++.++..|+++++.+.+++..+++.++++++|+++++|.++..+.+.. ....+++++|.+..+| .+...+..+++
T Consensus 238 ~-~~~~~l~~G~~~~~~~~~~~~~~~~~l~~~~~t~~~~~p~~l~~l~~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 315 (540)
T PRK06164 238 S-TLLGALAGGAPLVCEPVFDAARTARALRRHRVTHTFGNDEMLRRILDTA-GERADFPSARLFGFASFAPALGELAALA 315 (540)
T ss_pred H-HHHHHHhcCceEEecCCCCHHHHHHHHHHhCCeeecCCHHHHHHHHHhh-cccCCCcceeeeeeccCCcchHHHHHHH
Confidence 7 6899999999999999899999999999999999999999999998872 3455688999887766 45556777777
Q ss_pred HhhCCCCccccccccccCCccccccccccCCccccCCCcccccc-cCCeEEEEeCCCCCCCCCCCceeEEEecCcccccc
Q 014952 322 RAKLPHAKLGQGYGMTEAGPVLSMCLAFAKEPFEIKSGACGTVV-RNAEMKIVDPDTGISLPRNQAGEICIRGAQIMKGT 400 (415)
Q Consensus 322 ~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~G~p~-~~~~v~i~d~~~~~~~~~g~~Gel~v~~~~~~~gY 400 (415)
.+. ++++++.||+||++.+++... ..........+.|+|+ ++++++|+|++++++++.|+.|||+|+|++++.||
T Consensus 316 ~~~--~~~~~~~YG~tE~~~~~~~~~--~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~g~~~~~gY 391 (540)
T PRK06164 316 RAR--GVPLTGLYGSSEVQALVALQP--ATDPVSVRIEGGGRPASPEARVRARDPQDGALLPDGESGEIEIRAPSLMRGY 391 (540)
T ss_pred hhc--CCceecceeeccccceeeccC--CCCCCcceeccCccccCCCeEEEEecCCCCcCCCCCCeeEEEEecccccccc
Confidence 665 789999999999987554431 1112223345678886 89999999998999999999999999999999999
Q ss_pred ccCCcceeeeee
Q 014952 401 YHIYAPFLLSIV 412 (415)
Q Consensus 401 ~~~~~~~~~~~~ 412 (415)
|++|+.+...|.
T Consensus 392 ~~~~~~t~~~~~ 403 (540)
T PRK06164 392 LDNPDATARALT 403 (540)
T ss_pred cCCchhhhhccc
Confidence 999999887763
No 75
>TIGR03205 pimA dicarboxylate--CoA ligase PimA. PimA, a member of a large family of acyl-CoA ligases, is found in a characteristic operon pimFABCDE for the metabolism of pimelate and related compounds. It is found, so far, in Bradyrhizobium japonicum and several strains of Rhodopseudomonas palustris. PimA from R. palustris was shown to be active as a CoA ligase for C(7) to C(14) dicarboxylates and fatty acids.
Probab=100.00 E-value=5.9e-47 Score=374.08 Aligned_cols=392 Identities=27% Similarity=0.401 Sum_probs=306.6
Q ss_pred eeecCCCCCCC-CCCCCHHhHHHhhhccCCCCcEEEeCCCCCeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchh
Q 014952 11 IFRSKLPDIYI-PNHLPLHTYCFENISQFADRPCIINGPTGDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQ 89 (415)
Q Consensus 11 ~~~~~~~~~~~-~~~~tl~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~ 89 (415)
.|-+..+.|+. +...|+.+.+.+.++++|+++++++. ++.+||.||.++++++|++|.++|+++||+|+++++|+.+
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~--~~~~ty~el~~~~~~~a~~L~~~gi~~g~~V~i~~~~~~~ 83 (541)
T TIGR03205 6 QFYPEGVRWDATIARGTLPDLLSKAAADYGPRPALEFR--DRPITYTELEAMAETAAAALLRAGYGKDASVALYLGNTPD 83 (541)
T ss_pred cccCCCCCcccCCCCCCHHHHHHHHHHHcCCCceEEEC--CcEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChH
Confidence 34444444553 22459999999999999999999986 7899999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhCCeEeecCCCCCHHHHHHHHHhcCceEEEEcccc--hHHHHhhhhhc-CceEEEeCCCC----------
Q 014952 90 FVFAFLGASYIGATSTTANPFYTPPEIAKQAIASKAKIIITQAVY--NDKVRDLSEHH-GARIVTIDPPP---------- 156 (415)
Q Consensus 90 ~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~vl~~~~~--~~~~~~~~~~~-~~~~i~~~~~~---------- 156 (415)
++++++||+++|++++|++|..+.+++.+++++++++++++++.. .+...+..... ..+++.++...
T Consensus 84 ~~~~~la~~~~G~~~v~l~~~~~~~~l~~~i~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (541)
T TIGR03205 84 HPINFFGALKAGARVVHLSPLDGERALSHKLSDSGARLLITSDLAALLPMALKFLEKGLLDRLIVCEDDNWGKVGTPQAP 163 (541)
T ss_pred HHHHHHHHHhcCeEEEecCCCCCHHHHHHHHhhcCceEEEEeCchhhhHHHHHhhhcccceEEEEecccccccccccccc
Confidence 999999999999999999999999999999999999999997632 11121111111 12233332210
Q ss_pred ----CCccchhhhhhhcccCCCCcccCCCCCeEEEecCCCCCCCCceeeechHHHHHHHhhhhcCCCC--CccCCCCcEE
Q 014952 157 ----ENCLHFSELITQADENEIPAVKINPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENP--NLYLHKEDVI 230 (415)
Q Consensus 157 ----~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~--~~~~~~~~~~ 230 (415)
.....++++.. ............+++.++++|||||||.||+|.++|+++....... ..+.. .......+++
T Consensus 164 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~l~~~~~~~-~~~~~~~~~~~~~~~~~ 241 (541)
T TIGR03205 164 IPADPRIVTYADFVK-GAAAPAEWPAVTPDDVALLQYTGGTTGLPKGAMLTHGNLTSAVSIY-DVWGKPSRATRGDVERV 241 (541)
T ss_pred cCCCcccccHHHHHh-cCCCCCCCCCCCccCeEEEEECCCCCCCCcEEEEeHHHHHHHHHHH-HhhcccccccCCCCceE
Confidence 11223344421 1111112234567899999999999999999999999987654422 11100 1122345789
Q ss_pred EEccchHHHHhhHHHHHHHHHcCcEEEEcCCCCHHHHHHHHHhcCceeeecchHHHHHHHcCCCCCCCCcccceeeeecC
Q 014952 231 LCVLPLFHIYSLNSVLLCALRVGAAILIMQKFDIVKLMELVQKYKVTVAPFVPPIVLAVAKSGDVDKYDMSSIRTVMSGA 310 (415)
Q Consensus 231 ~~~~pl~~~~g~~~~~l~~l~~G~~~v~~~~~~~~~~~~~l~~~~~t~l~~~p~~l~~l~~~~~~~~~~l~~lr~v~~gG 310 (415)
++..|++|.+++...++.++..|+++++.+.+++..+++.|+++++|++.++|.++..+++........++++|.+++||
T Consensus 242 l~~~p~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~l~~i~~gg 321 (541)
T TIGR03205 242 ICVLPLFHIYALTVILLRSLRRGDLISLHQRFDVAAVFRDIEEKRATVFPGVPTMWIALANDPSLEKRDLSSLATIGSGG 321 (541)
T ss_pred EEeccHHHHHHHHHHHHHHHhcCCEEEecCCCCHHHHHHHHHHcCCeEeechHHHHHHHHhCccccccCccccceEEEcc
Confidence 99999999998877778899999999988888999999999999999999999999999876544555678999999999
Q ss_pred CCCCHHHHHHHHhhCCCCccccccccccCCccccccccccCCccccCCCcccccccCCeEEEEe-CCCCCCCCCCCceeE
Q 014952 311 APMGKELEDAVRAKLPHAKLGQGYGMTEAGPVLSMCLAFAKEPFEIKSGACGTVVRNAEMKIVD-PDTGISLPRNQAGEI 389 (415)
Q Consensus 311 ~~l~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~G~p~~~~~v~i~d-~~~~~~~~~g~~Gel 389 (415)
+++++++.+++.+.+ +.++++.||+||++..++.+. ......++++|+|++++.++|++ .+++++++.|+.|||
T Consensus 322 ~~~~~~~~~~~~~~~-~~~~~~~YG~TE~~~~~~~~~----~~~~~~~~~~G~~~~~~~~~v~~~d~~~~~~~~g~~Gel 396 (541)
T TIGR03205 322 APLPVEVANFFERKT-GLKLKSGWGMTETCSPGTGHP----PEGPDKPGSIGLMLPGIELDVVSLDDPTKVLPPGEVGEL 396 (541)
T ss_pred ccCCHHHHHHHHHHh-CCCeecccccccCCcccccCC----CCCCCCCCCcceeccCceeEEEecCCCCccCCCCCeeEE
Confidence 999999999999888 789999999999987554431 11223457899999999999864 256889999999999
Q ss_pred EEecCccccccccCCcceeeee
Q 014952 390 CIRGAQIMKGTYHIYAPFLLSI 411 (415)
Q Consensus 390 ~v~~~~~~~gY~~~~~~~~~~~ 411 (415)
+++|++++.||+++|+.+...|
T Consensus 397 ~v~~~~~~~gy~~~~~~~~~~~ 418 (541)
T TIGR03205 397 RIRGPNVTRGYWNRPEESAEAF 418 (541)
T ss_pred EEecCCccccccCChhhhHhhh
Confidence 9999999999999998887665
No 76
>PRK08008 caiC putative crotonobetaine/carnitine-CoA ligase; Validated
Probab=100.00 E-value=3.8e-47 Score=373.75 Aligned_cols=378 Identities=24% Similarity=0.338 Sum_probs=306.4
Q ss_pred CCCCHHhHHHhhhccCCCCcEEEeCCC---CCeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHH
Q 014952 23 NHLPLHTYCFENISQFADRPCIINGPT---GDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASY 99 (415)
Q Consensus 23 ~~~tl~~~l~~~a~~~p~~~a~~~~~~---~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~ 99 (415)
+..|+.+++.++++++|+++|++..+. .+.+||+||.++++++|+.|.++|+++||+|+++++|+.+++++++||++
T Consensus 5 ~~~~l~~~~~~~a~~~p~~~a~~~~~~~~~~~~~ty~~l~~~v~~la~~L~~~g~~~~~~v~i~~~n~~~~~~~~la~~~ 84 (517)
T PRK08008 5 GGQHLRQMWDDLADVYGHKTALIFESSGGVVRRYSYLELNEEINRTANLFYSLGIRKGDKVALHLDNCPEFIFCWFGLAK 84 (517)
T ss_pred ccccHHHHHHHHHHHCCCceEEEcccCCCccceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHH
Confidence 457899999999999999999987531 26899999999999999999999999999999999999999999999999
Q ss_pred hCCeEeecCCCCCHHHHHHHHHhcCceEEEEcccchHHHHhhhhhcC--c-eEEEeCCC---CCCccchhhhhhhcccCC
Q 014952 100 IGATSTTANPFYTPPEIAKQAIASKAKIIITQAVYNDKVRDLSEHHG--A-RIVTIDPP---PENCLHFSELITQADENE 173 (415)
Q Consensus 100 ~G~~~v~l~~~~~~~~~~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~--~-~~i~~~~~---~~~~~~~~~l~~~~~~~~ 173 (415)
+|++++++++..+.+++..++.+++++.++++.+..+.+.++..... . .++..+.. ......++++........
T Consensus 85 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (517)
T PRK08008 85 IGAIMVPINARLLREESAWILQNSQASLLVTSAQFYPMYRQIQQEDATPLRHICLTRVALPADDGVSSFTQLKAQQPATL 164 (517)
T ss_pred cCeEEEEcCcccCHHHHHHHHHhcCceEEEEecchhHHHHHHHhhccccCcEEEEecCCCcccccccCHHHHhccCCccc
Confidence 99999999999999999999999999999999887776665543211 2 23333321 122344444422211111
Q ss_pred CCcccCCCCCeEEEecCCCCCCCCceeeechHHHHHHHhhhhcCCCCCccCCCCcEEEEccchHHHHhhHHHHHHHHHcC
Q 014952 174 IPAVKINPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVG 253 (415)
Q Consensus 174 ~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~l~~l~~G 253 (415)
.......++++++|+|||||||.||+|.++|+++......... ...+.+++++++.+|++|..+....++.++..|
T Consensus 165 ~~~~~~~~~~~a~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~----~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G 240 (517)
T PRK08008 165 CYAPPLSTDDTAEILFTSGTTSRPKGVVITHYNLRFAGYYSAW----QCALRDDDVYLTVMPAFHIDCQCTAAMAAFSAG 240 (517)
T ss_pred cccCCCCCCCeEEEEECCCCCCCCcEEEEehHHHHHHHHHHhh----hcCCCCCCeEEEecCcHHHHHHHHHHHHHHhcC
Confidence 1223445689999999999999999999999999865432222 224677899999999999888777788999999
Q ss_pred cEEEEcCCCCHHHHHHHHHhcCceeeecchHHHHHHHcCCCCCCCCcccceeeeecCCCCCHHHHHHHHhhCCCCccccc
Q 014952 254 AAILIMQKFDIVKLMELVQKYKVTVAPFVPPIVLAVAKSGDVDKYDMSSIRTVMSGAAPMGKELEDAVRAKLPHAKLGQG 333 (415)
Q Consensus 254 ~~~v~~~~~~~~~~~~~l~~~~~t~l~~~p~~l~~l~~~~~~~~~~l~~lr~v~~gG~~l~~~~~~~~~~~~~~~~~~~~ 333 (415)
+++++.+++++..+++.++++++|++.++|.++..++..+......++++|.+.+++ +++.+..+.+.+.+ +.++++.
T Consensus 241 ~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~ 318 (517)
T PRK08008 241 ATFVLLEKYSARAFWGQVCKYRATITECIPMMIRTLMVQPPSANDRQHCLREVMFYL-NLSDQEKDAFEERF-GVRLLTS 318 (517)
T ss_pred cEEEEccccCHHHHHHHHHHcCCcEEechHHHHHHHHhCCCccccccccceeeEEec-CCCHHHHHHHHHHh-CCeEEee
Confidence 999999999999999999999999999999999998876544444457788887764 78899999999998 8999999
Q ss_pred cccccCCccccccccccCCccccCCCcccccccCCeEEEEeCCCCCCCCCCCceeEEEec---CccccccccCCcceeee
Q 014952 334 YGMTEAGPVLSMCLAFAKEPFEIKSGACGTVVRNAEMKIVDPDTGISLPRNQAGEICIRG---AQIMKGTYHIYAPFLLS 410 (415)
Q Consensus 334 YG~tE~~~~~~~~~~~~~~~~~~~~~~~G~p~~~~~v~i~d~~~~~~~~~g~~Gel~v~~---~~~~~gY~~~~~~~~~~ 410 (415)
||+||+++.+.... ........++|+|+++++++|+| +++++++.|+.|||+++| +.++.|||++|+.+...
T Consensus 319 YG~tE~~~~~~~~~----~~~~~~~~~~G~~~~g~~~~i~d-~~~~~~~~g~~Gel~v~g~~~~~~~~gy~~~~~~~~~~ 393 (517)
T PRK08008 319 YGMTETIVGIIGDR----PGDKRRWPSIGRPGFCYEAEIRD-DHNRPLPAGEIGEICIKGVPGKTIFKEYYLDPKATAKV 393 (517)
T ss_pred ccccccccccccCC----ccccccCCccccCCCCcEEEEEC-CCCCCCCCCCcceEEEeCCCCcchhhhHhCChHHHhhc
Confidence 99999986443321 11233457899999999999999 568999999999999998 69999999999988765
Q ss_pred e
Q 014952 411 I 411 (415)
Q Consensus 411 ~ 411 (415)
|
T Consensus 394 ~ 394 (517)
T PRK08008 394 L 394 (517)
T ss_pred c
Confidence 5
No 77
>PRK12316 peptide synthase; Provisional
Probab=100.00 E-value=2.3e-48 Score=454.56 Aligned_cols=378 Identities=21% Similarity=0.261 Sum_probs=313.1
Q ss_pred eecCCCCCCCCCCCCHHhHHHhhhccCCCCcEEEeCCCCCeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHH
Q 014952 12 FRSKLPDIYIPNHLPLHTYCFENISQFADRPCIINGPTGDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFV 91 (415)
Q Consensus 12 ~~~~~~~~~~~~~~tl~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~ 91 (415)
|+...++ .|...++++.|.++++++|+++|+++. ++.+||+||.++++++|+.|+++|+++|++|+++++|+.+++
T Consensus 1992 ~~~~~~~--~~~~~~~~~~~~~~a~~~p~~~A~~~~--~~~lTy~eL~~~a~~lA~~L~~~gv~~g~~V~l~~~~s~~~~ 2067 (5163)
T PRK12316 1992 WDRTPEA--YPRGPGVHQRIAEQAARAPEAIAVVFG--DQHLSYAELDSRANRLAHRLRARGVGPEVRVAIAAERSFELV 2067 (5163)
T ss_pred cCCCCCC--CCCCCCHHHHHHHHHHhCCCCeEEEcC--CCeEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHH
Confidence 5554433 344579999999999999999999987 789999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCeEeecCCCCCHHHHHHHHHhcCceEEEEcccchHHHHhhhhhcCceEEEeCCCCCCccchhhhhhhccc
Q 014952 92 FAFLGASYIGATSTTANPFYTPPEIAKQAIASKAKIIITQAVYNDKVRDLSEHHGARIVTIDPPPENCLHFSELITQADE 171 (415)
Q Consensus 92 ~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~ 171 (415)
++++||+++|++++|++|.++.+++.++++++++.+++++++....+... .....+.++.. ..+ ....
T Consensus 2068 ~~~lAil~aGa~~vpld~~~p~~rl~~il~~~~~~~vl~~~~~~~~~~~~---~~~~~~~~~~~-------~~~--~~~~ 2135 (5163)
T PRK12316 2068 VALLAVLKAGGAYVPLDPNYPAERLAYMLEDSGAALLLTQRHLLERLPLP---AGVARLPLDRD-------AEW--ADYP 2135 (5163)
T ss_pred HHHHHHHhhceEEeecCCCCCHHHHHHHHHhcCCCEEEeChhhhhhcccc---cccceEeccch-------hhh--hccC
Confidence 99999999999999999999999999999999999999988765433211 12223333221 011 1111
Q ss_pred CCCCcccCCCCCeEEEecCCCCCCCCceeeechHHHHHHHhhhhcCCCCCccCCCCcEEEEccchHHHHhhHHHHHHHHH
Q 014952 172 NEIPAVKINPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALR 251 (415)
Q Consensus 172 ~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~l~~l~ 251 (415)
...+.....++++++|+|||||||.||||+++|+++.+.+.+... .+.++++++++...|++|..+.. .++.++.
T Consensus 2136 ~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~~h~~l~~~~~~~~~----~~~~~~~d~~l~~~~~~fd~~~~-~~~~~L~ 2210 (5163)
T PRK12316 2136 DTAPAVQLAGENLAYVIYTSGSTGLPKGVAVSHGALVAHCQAAGE----RYELSPADCELQFMSFSFDGAHE-QWFHPLL 2210 (5163)
T ss_pred ccCCCCCCCCCCeEEEEeCccCCCCCCEeEEccHHHHHHHHHHHH----hcCCCCcceEEEecCchHHHHHH-HHHHHHh
Confidence 122234467899999999999999999999999999998888776 55688999999999999998887 5899999
Q ss_pred cCcEEEEcCC--CCHHHHHHHHHhcCceeeecchHHHHHHHcCCCCCCCCcccceeeeecCCCCCHHHHHHHHhhCCCCc
Q 014952 252 VGAAILIMQK--FDIVKLMELVQKYKVTVAPFVPPIVLAVAKSGDVDKYDMSSIRTVMSGAAPMGKELEDAVRAKLPHAK 329 (415)
Q Consensus 252 ~G~~~v~~~~--~~~~~~~~~l~~~~~t~l~~~p~~l~~l~~~~~~~~~~l~~lr~v~~gG~~l~~~~~~~~~~~~~~~~ 329 (415)
.|+++++.+. +++..+++.++++++|++.++|+++..+.+...... ..++||.+++||+++++++.+++.+.+++.+
T Consensus 2211 ~G~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~-~~~~lr~~~~gGe~l~~~~~~~~~~~~~~~~ 2289 (5163)
T PRK12316 2211 NGARVLIRDDELWDPEQLYDEMERHGVTILDFPPVYLQQLAEHAERDG-RPPAVRVYCFGGEAVPAASLRLAWEALRPVY 2289 (5163)
T ss_pred CCCEEEeCCcccCCHHHHHHHHHHcCCeEEEcChHHHHHHHhhhhccc-CCcceeEEEEecccCCHHHHHHHHHhCCCcE
Confidence 9999987763 689999999999999999999999999987543322 2358999999999999999999999888899
Q ss_pred cccccccccCCccccccccccCCccccCCCcccccccCCeEEEEeCCCCCCCCCCCceeEEEecCccccccccCCcceee
Q 014952 330 LGQGYGMTEAGPVLSMCLAFAKEPFEIKSGACGTVVRNAEMKIVDPDTGISLPRNQAGEICIRGAQIMKGTYHIYAPFLL 409 (415)
Q Consensus 330 ~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~G~p~~~~~v~i~d~~~~~~~~~g~~Gel~v~~~~~~~gY~~~~~~~~~ 409 (415)
+++.||+||++..++...............++|+|+++++++|+| +++++|+.|+.|||+|+|+++++||+++|+.|.+
T Consensus 2290 l~n~YG~TE~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~i~d-~~~~~vp~g~~GEl~i~G~~v~~GY~~~p~~T~~ 2368 (5163)
T PRK12316 2290 LFNGYGPTEAVVTPLLWKCRPQDPCGAAYVPIGRALGNRRAYILD-ADLNLLAPGMAGELYLGGEGLARGYLNRPGLTAE 2368 (5163)
T ss_pred EEECccchhheeeeeeeecccccccCCCcCCcccccCCCEEEEEC-CCCCCCCCCCeeEEEecchhhcccccCChhhhhh
Confidence 999999999986544332111111111235799999999999999 5589999999999999999999999999999999
Q ss_pred eee
Q 014952 410 SIV 412 (415)
Q Consensus 410 ~~~ 412 (415)
+|+
T Consensus 2369 ~f~ 2371 (5163)
T PRK12316 2369 RFV 2371 (5163)
T ss_pred hcc
Confidence 986
No 78
>TIGR01734 D-ala-DACP-lig D-alanine--poly(phosphoribitol) ligase, subunit 1. This model represents the enzyme (also called D-alanine-D-alanyl carrier protein ligase) which activates D-alanine as an adenylate via the reaction D-ala + ATP - D-ala-AMP + PPi, and further catalyzes the condensation of the amino acid adenylate with the D-alanyl carrier protein (D-ala-ACP). The D-alanine is then further transferred to teichoic acid in the biosynthesis of lipoteichoic acid (LTA) and wall teichoic acid (WTA) in gram positive bacteria, both polysacchatides.
Probab=100.00 E-value=8.3e-48 Score=377.17 Aligned_cols=365 Identities=20% Similarity=0.222 Sum_probs=303.7
Q ss_pred CHHhHHHhhhccCCCCcEEEeCCCCCeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHHhCCeEe
Q 014952 26 PLHTYCFENISQFADRPCIINGPTGDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGATST 105 (415)
Q Consensus 26 tl~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v 105 (415)
++.+.|.+.++.+|+++|+.+. ++.+||+||.++++++|+.|.+.|+++|++|+++++|+.++++++|||+++|++++
T Consensus 1 ~~~~~l~~~a~~~p~~~a~~~~--~~~~ty~el~~~~~~~a~~L~~~g~~~~~~V~i~~~~~~~~~~~~la~~~~G~~~v 78 (502)
T TIGR01734 1 KLIEAIQAFAETYPQTIAYRYQ--GQELTYQQLKEQSDRLAAFIQKRILPKKSPIIVYGHMEPHMLVAFLGSIKSGHAYI 78 (502)
T ss_pred CHHHHHHHHHHHCCCceEEEcC--CcEEeHHHHHHHHHHHHHHHHHhCCCCCCeEEEEeCCCHHHHHHHHHHHHhCCEEe
Confidence 5778999999999999999887 78999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHHHHHhcCceEEEEcccchHHHHhhhhhcCceEEEeCCCCCCccchhhhhhhcccCCCCcccCCCCCeE
Q 014952 106 TANPFYTPPEIAKQAIASKAKIIITQAVYNDKVRDLSEHHGARIVTIDPPPENCLHFSELITQADENEIPAVKINPDDVV 185 (415)
Q Consensus 106 ~l~~~~~~~~~~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a 185 (415)
|+++.++.+++..+++..+++.++++.+...... ...++.++. .+++..... .........+++.+
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~------~~~~~~~~~-------~~~~~~~~~-~~~~~~~~~~~~~~ 144 (502)
T TIGR01734 79 PVDTSIPSERIEMIIEAAGPELVIHTAELSIDAV------GTQIITLSA-------LEQAETSGG-PVSFDHAVKGDDNY 144 (502)
T ss_pred CCCCcChHHHHHHHHHhcCCCEEEeccccccccc------CCceEEchH-------hhhhhhhcC-CccccccCCCCCeE
Confidence 9999999999999999999999999876543221 112222221 111111111 11112234678899
Q ss_pred EEecCCCCCCCCceeeechHHHHHHHhhhhcCCCCCccCCCCcEEEEccchHHHHhhHHHHHHHHHcCcEEEEcCC---C
Q 014952 186 ALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIMQK---F 262 (415)
Q Consensus 186 ~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~l~~l~~G~~~v~~~~---~ 262 (415)
+|+|||||||.||+|.++|.++.....+... .+....+++++...|++|..++. .++.++..|+++++.++ .
T Consensus 145 ~il~TSGTTG~PK~v~~s~~~~~~~~~~~~~----~~~~~~~~~~l~~~p~~~~~~~~-~~~~~l~~G~~~~~~~~~~~~ 219 (502)
T TIGR01734 145 YIIYTSGSTGNPKGVQISHDNLVSFTNWMLA----DFPLSEGKQFLNQAPFSFDLSVM-DLYPCLASGGTLHCLDKDITN 219 (502)
T ss_pred EEEECCCCCCCCCEEEEecHHHHHHHHHHHH----hCCCCCCceEEeecCceechhHH-HHHHHHHCCCEEEEcCHHHhc
Confidence 9999999999999999999999988877666 34578889999999999999887 57899999999999875 5
Q ss_pred CHHHHHHHHHhcCceeeecchHHHHHHHcCCCCCCCCcccceeeeecCCCCCHHHHHHHHhhCCCCccccccccccCCcc
Q 014952 263 DIVKLMELVQKYKVTVAPFVPPIVLAVAKSGDVDKYDMSSIRTVMSGAAPMGKELEDAVRAKLPHAKLGQGYGMTEAGPV 342 (415)
Q Consensus 263 ~~~~~~~~l~~~~~t~l~~~p~~l~~l~~~~~~~~~~l~~lr~v~~gG~~l~~~~~~~~~~~~~~~~~~~~YG~tE~~~~ 342 (415)
++..+++.+++++++.+.++|.++..++.....+...++++|.++++|++++.++.+++.+.+++..+++.||+||+++.
T Consensus 220 ~~~~~~~~i~~~~~~~~~~~p~~~~~~l~~~~~~~~~~~~l~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~yG~tE~~~~ 299 (502)
T TIGR01734 220 NFKLLFEELPKTGLNVWVSTPSFVDMCLLDPNFNQENYPHLTHFLFCGEELPVKTAKALLERFPKATIYNTYGPTEATVA 299 (502)
T ss_pred CHHHHHHHHHHcCCeEEEEChhHHHHHHhccccccccCCcccEEEEcCCcCCHHHHHHHHHHCCCcEEEeCccCCcceEE
Confidence 88999999999999999999999987776654455678899999999999999999999999989999999999999864
Q ss_pred ccccccccCCccccCCCcccccccCCeEEEEeCCCCCCCCCCCceeEEEecCccccccccCCcceeeeee
Q 014952 343 LSMCLAFAKEPFEIKSGACGTVVRNAEMKIVDPDTGISLPRNQAGEICIRGAQIMKGTYHIYAPFLLSIV 412 (415)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~G~p~~~~~v~i~d~~~~~~~~~g~~Gel~v~~~~~~~gY~~~~~~~~~~~~ 412 (415)
++......+........++|+|+|+++++|+|+ ++++++.|+.|||+++|+.++.||+++|+.+..+|.
T Consensus 300 ~~~~~~~~~~~~~~~~~~vg~~~~~~~~~i~~~-~~~~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~~~ 368 (502)
T TIGR01734 300 VTSVKITQEILDQYPRLPIGFAKPDMNLFIMDE-EGEPLPEGEKGEIVIVGPSVSKGYLNNPEKTAEAFF 368 (502)
T ss_pred EEEEEccccccccCCccccccccCCCEEEEECC-CCCCCCCCCeeEEEEccccccccccCCcccchHhhe
Confidence 443211111222334467999999999999994 489999999999999999999999999999887763
No 79
>PRK08751 putative long-chain fatty acyl CoA ligase; Provisional
Probab=100.00 E-value=4.2e-47 Score=376.85 Aligned_cols=393 Identities=25% Similarity=0.437 Sum_probs=309.8
Q ss_pred eeecCCCCCCCCC-----CCCHHhHHHhhhccCCCCcEEEeCCCCCeeeHHHHHHHHHHHHHHHH-HcCCCCCCEEEEEc
Q 014952 11 IFRSKLPDIYIPN-----HLPLHTYCFENISQFADRPCIINGPTGDVYTYADVELTSRKVAAGLS-KLGVQKGDVIMLLL 84 (415)
Q Consensus 11 ~~~~~~~~~~~~~-----~~tl~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~~a~~L~-~~g~~~g~~V~i~~ 84 (415)
-|+..+|+....+ ..|+.+.|...+.++|+++|+++. ++.+||+||.++++++|+.|. +.|+++||+|++++
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~a~~~~--~~~~Ty~el~~~~~~la~~L~~~~g~~~g~~V~i~~ 83 (560)
T PRK08751 6 PWLQSYPAGVAAEIDLEQFRTVAEVFATSVAKFADRPAYHSF--GKTITYREADQLVEQFAAYLLGELQLKKGDRVALMM 83 (560)
T ss_pred chhhhcCCCCCCccCCcCCCcHHHHHHHHHHhCCCCceEEEC--CceeeHHHHHHHHHHHHHHHHHHhCCCCCCEEEEEC
Confidence 4777776642221 268999999999999999999986 789999999999999999997 58999999999999
Q ss_pred CCchhHHHHHHHHHHhCCeEeecCCCCCHHHHHHHHHhcCceEEEEcccchHHHHhhhhhcCce-EEEeCC---------
Q 014952 85 QNCPQFVFAFLGASYIGATSTTANPFYTPPEIAKQAIASKAKIIITQAVYNDKVRDLSEHHGAR-IVTIDP--------- 154 (415)
Q Consensus 85 ~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~-~i~~~~--------- 154 (415)
+|+.+++++++||+++|++++|++|.++.+++..++.+++++++++++.....+.......+.. ++..+.
T Consensus 84 ~~~~~~~~~~lA~~~~G~~~v~l~p~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (560)
T PRK08751 84 PNCLQYPIATFGVLRAGLTVVNVNPLYTPRELKHQLIDSGASVLVVIDNFGTTVQQVIADTPVKQVITTGLGDMLGFPKA 163 (560)
T ss_pred CCCHHHHHHHHHHHHhCeEEeccCccCCHHHHHHHHHhcCCeEEEEcchhHHHHHHHhhCCCccEEEEechhhhcccccc
Confidence 9999999999999999999999999999999999999999999999987766655543332222 222110
Q ss_pred -----------------CCCCccchhhhhhhcccCCCCcccCCCCCeEEEecCCCCCCCCceeeechHHHHHHHhhhhcC
Q 014952 155 -----------------PPENCLHFSELITQADENEIPAVKINPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDG 217 (415)
Q Consensus 155 -----------------~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~ 217 (415)
.......+++..........+.....+++.++++|||||||.||+|.++|.++..........
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~ 243 (560)
T PRK08751 164 ALVNFVVKYVKKLVPEYRINGAIRFREALALGRKHSMPTLQIEPDDIAFLQYTGGTTGVAKGAMLTHRNLVANMQQAHQW 243 (560)
T ss_pred hhhhhhhhhhhccccccCCCccccHHHHHhccCCCCCCCCCCCcccEEEEEcCCCCCCCCCEEEEccHHHHHHHHHHHHh
Confidence 000111222221111111122334567899999999999999999999999998877655442
Q ss_pred CCCCccCCC-CcEEEEccchHHHHhhHHHHHHHHHcCcEEEEcC-CCCHHHHHHHHHhcCceeeecchHHHHHHHcCCCC
Q 014952 218 ENPNLYLHK-EDVILCVLPLFHIYSLNSVLLCALRVGAAILIMQ-KFDIVKLMELVQKYKVTVAPFVPPIVLAVAKSGDV 295 (415)
Q Consensus 218 ~~~~~~~~~-~~~~~~~~pl~~~~g~~~~~l~~l~~G~~~v~~~-~~~~~~~~~~l~~~~~t~l~~~p~~l~~l~~~~~~ 295 (415)
......... .+.++...|++|.+++....+..+..|++.++.. .+++..+++.++++++|++.++|.++..+.+....
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~ 323 (560)
T PRK08751 244 LAGTGKLEEGCEVVITALPLYHIFALTANGLVFMKIGGCNHLISNPRDMPGFVKELKKTRFTAFTGVNTLFNGLLNTPGF 323 (560)
T ss_pred hccccccCCCCceEEEecChHHHHHHHHhhhhHhhccceEEEecCcCCHHHHHHHHHhcceeEecChHHHHHHHHcCcCc
Confidence 210001233 3567788999999998655566677777766654 57899999999999999999999999999987665
Q ss_pred CCCCcccceeeeecCCCCCHHHHHHHHhhCCCCccccccccccCCccccccccccCCccccCCCcccccccCCeEEEEeC
Q 014952 296 DKYDMSSIRTVMSGAAPMGKELEDAVRAKLPHAKLGQGYGMTEAGPVLSMCLAFAKEPFEIKSGACGTVVRNAEMKIVDP 375 (415)
Q Consensus 296 ~~~~l~~lr~v~~gG~~l~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~G~p~~~~~v~i~d~ 375 (415)
...+++++|.+++||++++.++.+++++.+ +..+++.||+||+++.++.+. .......+++|+|+++++++|+|
T Consensus 324 ~~~~l~~lr~v~~gG~~~~~~~~~~~~~~~-~~~~~~~YG~tE~~~~~~~~~----~~~~~~~~~vG~~~~~~~v~i~d- 397 (560)
T PRK08751 324 DQIDFSSLKMTLGGGMAVQRSVAERWKQVT-GLTLVEAYGLTETSPAACINP----LTLKEYNGSIGLPIPSTDACIKD- 397 (560)
T ss_pred CCcchhhheeeeeCCCCCCHHHHHHHHHHh-CCeEEEeeccccCCCceeccc----ccccccCCCcCccCCCceEEEEC-
Confidence 666789999999999999999999999988 789999999999987554431 11223457899999999999999
Q ss_pred CCCCCCCCCCceeEEEecCccccccccCCcceeeee
Q 014952 376 DTGISLPRNQAGEICIRGAQIMKGTYHIYAPFLLSI 411 (415)
Q Consensus 376 ~~~~~~~~g~~Gel~v~~~~~~~gY~~~~~~~~~~~ 411 (415)
+++++++.|+.|||+++|+.++.||+++|+.+...|
T Consensus 398 ~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~ 433 (560)
T PRK08751 398 DAGTVLAIGEIGELCIKGPQVMKGYWKRPEETAKVM 433 (560)
T ss_pred CCCCCCCCCCceEEEEecCccchhhcCChhhhhhcc
Confidence 568999999999999999999999999999877654
No 80
>PRK08974 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=6.6e-47 Score=375.26 Aligned_cols=393 Identities=26% Similarity=0.428 Sum_probs=310.7
Q ss_pred cceeecCCCCCCCCC-----CCCHHhHHHhhhccCCCCcEEEeCCCCCeeeHHHHHHHHHHHHHHHHH-cCCCCCCEEEE
Q 014952 9 EFIFRSKLPDIYIPN-----HLPLHTYCFENISQFADRPCIINGPTGDVYTYADVELTSRKVAAGLSK-LGVQKGDVIML 82 (415)
Q Consensus 9 ~~~~~~~~~~~~~~~-----~~tl~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~~a~~L~~-~g~~~g~~V~i 82 (415)
+++|...+|..+.-. ..++.+.|..+++++|+++|+++. ++.+||.||.++++++|..|.+ +|+++|++|++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~a~~~p~~~a~~~~--~~~lTy~~l~~~~~~la~~L~~~~g~~~g~~V~i 79 (560)
T PRK08974 2 EKVWLNRYPADVPAEINPDRYQSLVDMFEQAVARYADQPAFINM--GEVMTFRKLEERSRAFAAYLQNGLGLKKGDRVAL 79 (560)
T ss_pred CCCchhhCCCCCCCCCCCCCcccHHHHHHHHHHhCCCCceEEEC--CccccHHHHHHHHHHHHHHHHHhcCCCCCCEEEE
Confidence 578888886644211 357999999999999999999986 7899999999999999999984 89999999999
Q ss_pred EcCCchhHHHHHHHHHHhCCeEeecCCCCCHHHHHHHHHhcCceEEEEcccchHHHHhhhhhcCceEEEeCCCC------
Q 014952 83 LLQNCPQFVFAFLGASYIGATSTTANPFYTPPEIAKQAIASKAKIIITQAVYNDKVRDLSEHHGARIVTIDPPP------ 156 (415)
Q Consensus 83 ~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~i~~~~~~------ 156 (415)
+++|+.+++++++||+++|++++|++|.++.+++.+++++++++.++++++..+.+...........+......
T Consensus 80 ~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (560)
T PRK08974 80 MMPNLLQYPIALFGILRAGMIVVNVNPLYTPRELEHQLNDSGAKAIVIVSNFAHTLEKVVFKTPVKHVILTRMGDQLSTA 159 (560)
T ss_pred ECCCCHHHHHHHHHHHHcCcEEeccCccCCHHHHHHHHHhcCceEEEEeccccHHHHHHhhhcCcceEEEeccccccccc
Confidence 99999999999999999999999999999999999999999999999988766655544333333222221000
Q ss_pred ---------------------CCccchhhhhhhcccCCCCcccCCCCCeEEEecCCCCCCCCceeeechHHHHHHHhhhh
Q 014952 157 ---------------------ENCLHFSELITQADENEIPAVKINPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQV 215 (415)
Q Consensus 157 ---------------------~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~ 215 (415)
+....+.+................++++++|+|||||||.||+|.++|.++..+.....
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~ 239 (560)
T PRK08974 160 KGTLVNFVVKYIKRLVPKYHLPDAISFRSALHKGRRMQYVKPELVPEDLAFLQYTGGTTGVAKGAMLTHRNMLANLEQAK 239 (560)
T ss_pred ccccccchhhhcccccccccCCCcccHHHHhhccCCCCCCCCCCCCCCeEEEEECCCCCCCCcEEEEchHHHHHHHHHHH
Confidence 00011111101111111112234678999999999999999999999999987665443
Q ss_pred cCCCCCccCCCCcEEEEccchHHHHhhHHHHHHHHHcCcEEEEcC-CCCHHHHHHHHHhcCceeeecchHHHHHHHcCCC
Q 014952 216 DGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIMQ-KFDIVKLMELVQKYKVTVAPFVPPIVLAVAKSGD 294 (415)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~l~~l~~G~~~v~~~-~~~~~~~~~~l~~~~~t~l~~~p~~l~~l~~~~~ 294 (415)
..+. .+.....+.++..+|++|.+++....+..+..|+++++.. ..++..+++.++++++|++.++|.++..|.+...
T Consensus 240 ~~~~-~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~ 318 (560)
T PRK08974 240 AAYG-PLLHPGKELVVTALPLYHIFALTVNCLLFIELGGQNLLITNPRDIPGFVKELKKYPFTAITGVNTLFNALLNNEE 318 (560)
T ss_pred Hhhc-cccCCCccEEEEeCcHHHHHHHHHHHHHHhhcCCeEEEecCccCHHHHHHHHHhcCcceEcCcHHHHHHHHhCcC
Confidence 3221 1123446788899999999987666677788999877664 5688899999999999999999999999988766
Q ss_pred CCCCCcccceeeeecCCCCCHHHHHHHHhhCCCCccccccccccCCccccccccccCCccccCCCcccccccCCeEEEEe
Q 014952 295 VDKYDMSSIRTVMSGAAPMGKELEDAVRAKLPHAKLGQGYGMTEAGPVLSMCLAFAKEPFEIKSGACGTVVRNAEMKIVD 374 (415)
Q Consensus 295 ~~~~~l~~lr~v~~gG~~l~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~G~p~~~~~v~i~d 374 (415)
....+++++|.+++||++++..+.+++++.+ +..+++.||+||++.+++.+. .......+++|+|+|+++++|+|
T Consensus 319 ~~~~~~~~lr~~~~gg~~~~~~~~~~~~~~~-g~~~~~~YG~tE~~~~~~~~~----~~~~~~~~~~G~~~~~~~~~i~~ 393 (560)
T PRK08974 319 FQELDFSSLKLSVGGGMAVQQAVAERWVKLT-GQYLLEGYGLTECSPLVSVNP----YDLDYYSGSIGLPVPSTEIKLVD 393 (560)
T ss_pred cccCCccceeEEEecCccCCHHHHHHHHHHh-CCcEEeeecccccCceeeccC----CCCcccCCccccCcCCCEEEEEC
Confidence 5566788999999999999999999999988 899999999999997665542 11223457899999999999999
Q ss_pred CCCCCCCCCCCceeEEEecCccccccccCCcceeee
Q 014952 375 PDTGISLPRNQAGEICIRGAQIMKGTYHIYAPFLLS 410 (415)
Q Consensus 375 ~~~~~~~~~g~~Gel~v~~~~~~~gY~~~~~~~~~~ 410 (415)
+ ++++++.|+.|||+++|+.++.||+++++.+...
T Consensus 394 ~-~~~~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~ 428 (560)
T PRK08974 394 D-DGNEVPPGEPGELWVKGPQVMLGYWQRPEATDEV 428 (560)
T ss_pred C-CCCCCCCCCceEEEEecCCcchhhcCChhhhhhh
Confidence 5 5899999999999999999999999998876543
No 81
>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase. Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.
Probab=100.00 E-value=1.1e-47 Score=416.45 Aligned_cols=381 Identities=20% Similarity=0.273 Sum_probs=300.6
Q ss_pred CCCHHhHHHhhhccCCCCcEEEeCC-------CCCeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHH
Q 014952 24 HLPLHTYCFENISQFADRPCIINGP-------TGDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLG 96 (415)
Q Consensus 24 ~~tl~~~l~~~a~~~p~~~a~~~~~-------~~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA 96 (415)
..++.+.|.++++++|+++|+++.. .++++||+||.++++++|++|+++|+++|++|+++++|+++++++++|
T Consensus 235 ~~~l~~~~~~~a~~~pd~~A~~~~~~~~~~~~~~~~lTY~eL~~~~~~lA~~L~~~gv~~g~~V~i~~~~~~~~i~~~lA 314 (1389)
T TIGR03443 235 RGAIHDIFADNAEKHPDRTCVVETPSFLDPSSKTRSFTYKQINEASNILAHYLLKTGIKRGDVVMIYAYRGVDLVVAVMG 314 (1389)
T ss_pred cCcHHHHHHHHHHhCCCCeEEEeccccccccCCCceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEEecCCHHHHHHHHH
Confidence 3689999999999999999998631 357899999999999999999999999999999999999999999999
Q ss_pred HHHhCCeEeecCCCCCHHHHHHHHHhcCceEEEEcccch---HHHHhhhhh-----cCceEEEeCCCCC---Cccch--h
Q 014952 97 ASYIGATSTTANPFYTPPEIAKQAIASKAKIIITQAVYN---DKVRDLSEH-----HGARIVTIDPPPE---NCLHF--S 163 (415)
Q Consensus 97 ~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~vl~~~~~~---~~~~~~~~~-----~~~~~i~~~~~~~---~~~~~--~ 163 (415)
|+++|++++|++|.++.+++..+++++++++++++.... ..+...... .....+.+..... ..... .
T Consensus 315 ~l~~G~~~vpldp~~p~~~~~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 394 (1389)
T TIGR03443 315 VLKAGATFSVIDPAYPPARQTIYLSVAKPRALIVIEKAGTLDQLVRDYIDKELELRTEIPALALQDDGSLVGGSLEGGET 394 (1389)
T ss_pred HHhhCcEEeccCCCCcHHHHHHHHHhcCCCEEEEeccccccchhhhhhhhcccccccccceEEecccccccccccccccc
Confidence 999999999999999999999999999999999876421 111111000 0111122211100 00000 0
Q ss_pred hhhhhcc--cCCCCcccCCCCCeEEEecCCCCCCCCceeeechHHHHHHHhhhhcCCCCCccCCCCcEEEEccchHHHHh
Q 014952 164 ELITQAD--ENEIPAVKINPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYS 241 (415)
Q Consensus 164 ~l~~~~~--~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g 241 (415)
++..... ..........++++++|+|||||||.||||+++|+++.+.+.+... .+.+.++++++...|++|..+
T Consensus 395 ~~~~~~~~~~~~~~~~~~~~~d~a~ii~TSGSTG~PKgV~~sh~~l~~~~~~~~~----~~~~~~~d~~~~~~~~~~d~~ 470 (1389)
T TIGR03443 395 DVLAPYQALKDTPTGVVVGPDSNPTLSFTSGSEGIPKGVLGRHFSLAYYFPWMAK----RFGLSENDKFTMLSGIAHDPI 470 (1389)
T ss_pred cccccccccccCCCCCcCCCCCceEEEECCCCCCCCCEEEeccHHHHHHHHHHHH----hcCCCCCCEEEEecCceecch
Confidence 1100000 0011122346789999999999999999999999999988877766 456788999999999999888
Q ss_pred hHHHHHHHHHcCcEEEEcCC---CCHHHHHHHHHhcCceeeecchHHHHHHHcCCCCCCCCcccceeeeecCCCCCHHHH
Q 014952 242 LNSVLLCALRVGAAILIMQK---FDIVKLMELVQKYKVTVAPFVPPIVLAVAKSGDVDKYDMSSIRTVMSGAAPMGKELE 318 (415)
Q Consensus 242 ~~~~~l~~l~~G~~~v~~~~---~~~~~~~~~l~~~~~t~l~~~p~~l~~l~~~~~~~~~~l~~lr~v~~gG~~l~~~~~ 318 (415)
.. .++.++..|+++++.+. .++..+.+.++++++|++.++|+++..|.... ...+++||.+++||+++++...
T Consensus 471 ~~-~i~~~L~~G~~l~~~~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~---~~~~~~lr~~~~gGe~l~~~~~ 546 (1389)
T TIGR03443 471 QR-DMFTPLFLGAQLLVPTADDIGTPGRLAEWMAKYGATVTHLTPAMGQLLSAQA---TTPIPSLHHAFFVGDILTKRDC 546 (1389)
T ss_pred HH-HHHHHHhCCCEEEEcChhhccCHHHHHHHHHHhCCeEEEeCHHHHHHHHhcc---cccCCCccEEEEecccCCHHHH
Confidence 76 58899999999999864 36889999999999999999999999887543 2357899999999999999999
Q ss_pred HHHHhhCCCCccccccccccCCccccccccccCCc------cccCCCcccccccCCeEEEEeCC-CCCCCCCCCceeEEE
Q 014952 319 DAVRAKLPHAKLGQGYGMTEAGPVLSMCLAFAKEP------FEIKSGACGTVVRNAEMKIVDPD-TGISLPRNQAGEICI 391 (415)
Q Consensus 319 ~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~------~~~~~~~~G~p~~~~~v~i~d~~-~~~~~~~g~~Gel~v 391 (415)
+++.+..++.++++.||+||++..++......... ......++|+|+++++++|+|++ ++++++.|+.|||+|
T Consensus 547 ~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~ivd~~~~~~~~~~G~~GEL~i 626 (1389)
T TIGR03443 547 LRLQTLAENVCIVNMYGTTETQRAVSYFEIPSRSSDSTFLKNLKDVMPAGKGMKNVQLLVVNRNDRTQTCGVGEVGEIYV 626 (1389)
T ss_pred HHHHHhCCCCEEEECccCCccceeEEEEEccccccccchhhcccCcCcCCCccCCCEEEEECCccCCCcCCCCCceEEEe
Confidence 99999888899999999999986554321110000 01134578999999999999965 357899999999999
Q ss_pred ecCccccccccCCcceeeeee
Q 014952 392 RGAQIMKGTYHIYAPFLLSIV 412 (415)
Q Consensus 392 ~~~~~~~gY~~~~~~~~~~~~ 412 (415)
+||++++||+|+|+.|.++|+
T Consensus 627 ~G~~v~~GY~~~p~~t~~~f~ 647 (1389)
T TIGR03443 627 RAGGLAEGYLGLPELNAEKFV 647 (1389)
T ss_pred cccccchhcCCChhHhhhhcc
Confidence 999999999999999998885
No 82
>PRK07867 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1e-46 Score=370.55 Aligned_cols=363 Identities=21% Similarity=0.320 Sum_probs=297.2
Q ss_pred CCCCCHHhHHHhhhccCCCCcEEEeCCCCCeeeHHHHHHHHHHHHHHHHHc-CCCCCCEEEEEcCCchhHHHHHHHHHHh
Q 014952 22 PNHLPLHTYCFENISQFADRPCIINGPTGDVYTYADVELTSRKVAAGLSKL-GVQKGDVIMLLLQNCPQFVFAFLGASYI 100 (415)
Q Consensus 22 ~~~~tl~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~~a~~L~~~-g~~~g~~V~i~~~~~~~~~~~~lA~~~~ 100 (415)
|...|+.+.|.+.+. ++++++++. ++.+||+||.++++++|++|+++ |++++++|+++++|+++++++++||+++
T Consensus 2 ~~~~~~~~~l~~~a~--~~~~a~~~~--~~~~Ty~el~~~v~~lA~~L~~~~~~~~~~~V~i~~~n~~~~~~~~lA~~~~ 77 (529)
T PRK07867 2 SSAPTVAELLLPLAE--DDDRGLYFE--DSFTSWREHIRGSAARAAALRARLDPTRPPHVGVLLDNTPEFSLLLGAAALS 77 (529)
T ss_pred CccccHHHHHHHhcc--cCCceEEEC--CcEEeHHHHHHHHHHHHHHHHHhhCCCCCCEEEEECCCCHHHHHHHHHHHhc
Confidence 456789999988875 789999986 78999999999999999999997 8999999999999999999999999999
Q ss_pred CCeEeecCCCCCHHHHHHHHHhcCceEEEEcccchHHHHhhhhhcCceEEEeCCCCCCccchhhhhhhcccCCCCcccCC
Q 014952 101 GATSTTANPFYTPPEIAKQAIASKAKIIITQAVYNDKVRDLSEHHGARIVTIDPPPENCLHFSELITQADENEIPAVKIN 180 (415)
Q Consensus 101 G~~~v~l~~~~~~~~~~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 180 (415)
|++++|+++.++.+++.++++++++++++++++..+.+.... ....++.++. ..+.+++..............
T Consensus 78 G~~~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~--~~~~~~~~~~-----~~~~~~l~~~~~~~~~~~~~~ 150 (529)
T PRK07867 78 GIVPVGLNPTRRGAALARDIAHADCQLVLTESAHAELLDGLD--PGVRVINVDS-----PAWADELAAHRDAEPPFRVAD 150 (529)
T ss_pred CCEEEEecCCCChHHHHHHHHhCCCeEEEECHhHHHHHHhhc--cCceEEEecc-----ccHHHHhcccCCCCCCcccCC
Confidence 999999999999999999999999999999988776554432 2334444332 123333222211112233456
Q ss_pred CCCeEEEecCCCCCCCCceeeechHHHHHHHhhhhcCCCCCccCCCCcEEEEccchHHHHhhHHHHHHHHHcCcEEEEcC
Q 014952 181 PDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIMQ 260 (415)
Q Consensus 181 ~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~l~~l~~G~~~v~~~ 260 (415)
++++++|+|||||||.||+|.++|+++......... .+++..+|+++..+|++|..++...++.++..|+++++.+
T Consensus 151 ~~~~~~i~~TSGTTG~PKgv~~s~~~l~~~~~~~~~----~~~~~~~d~~l~~~pl~~~~~~~~~~~~~l~~G~~~~~~~ 226 (529)
T PRK07867 151 PDDLFMLIFTSGTSGDPKAVRCTHRKVASAGVMLAQ----RFGLGPDDVCYVSMPLFHSNAVMAGWAVALAAGASIALRR 226 (529)
T ss_pred ccceEEEEECCCCCCCCcEEEecHHHHHHHHHHHHH----hhCCCcccEEEEecchhHHHHHHHHHHHHHhcCceEEecC
Confidence 789999999999999999999999999887777665 4457789999999999999998877778899999999998
Q ss_pred CCCHHHHHHHHHhcCceeeecchHHHHHHHcCCCCCCCCcccceeeeecCCCCCHHHHHHHHhhCCCCccccccccccCC
Q 014952 261 KFDIVKLMELVQKYKVTVAPFVPPIVLAVAKSGDVDKYDMSSIRTVMSGAAPMGKELEDAVRAKLPHAKLGQGYGMTEAG 340 (415)
Q Consensus 261 ~~~~~~~~~~l~~~~~t~l~~~p~~l~~l~~~~~~~~~~l~~lr~v~~gG~~l~~~~~~~~~~~~~~~~~~~~YG~tE~~ 340 (415)
++++..+++.++++++|++.++|..+..++..........+++|. ++||+.+++.. +++.+.+ ++++++.||+||++
T Consensus 227 ~~~~~~~~~~i~~~~vt~~~~~p~~~~~ll~~~~~~~~~~~~lr~-~~gg~~~~~~~-~~~~~~~-g~~l~~~YG~TE~~ 303 (529)
T PRK07867 227 KFSASGFLPDVRRYGATYANYVGKPLSYVLATPERPDDADNPLRI-VYGNEGAPGDI-ARFARRF-GCVVVDGFGSTEGG 303 (529)
T ss_pred CCCHHHHHHHHHHhCCeEEeccHHHHHHHHhCCCcccccccceEE-EecCCCChHHH-HHHHHHh-CCcEEEeecccccc
Confidence 899999999999999999999999999888765433333467885 56888887664 6777788 88999999999998
Q ss_pred ccccccccccCCccccCCCcccccccCCeEEEEeCCCCCCCCCCC------------ceeEEE-ecCccccccccCCcce
Q 014952 341 PVLSMCLAFAKEPFEIKSGACGTVVRNAEMKIVDPDTGISLPRNQ------------AGEICI-RGAQIMKGTYHIYAPF 407 (415)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~G~p~~~~~v~i~d~~~~~~~~~g~------------~Gel~v-~~~~~~~gY~~~~~~~ 407 (415)
...+.. .....+++|+|+++ ++|+|++++++++.|+ .|||++ +|++++.||+++|+.+
T Consensus 304 ~~~~~~-------~~~~~~~~g~~~~~--~~i~~~~~~~~~~~g~~~~~~~~~~~~~~Gel~i~~g~~~~~gy~~~~~~~ 374 (529)
T PRK07867 304 VAITRT-------PDTPPGALGPLPPG--VAIVDPDTGTECPPAEDADGRLLNADEAIGELVNTAGPGGFEGYYNDPEAD 374 (529)
T ss_pred cccccC-------CCCCCCCcCCCCCC--EEEEECCCCCCCCCCccccccccccCCcceEEEEecCCcccccccCChHhh
Confidence 544322 12345789999998 7888988899999998 999999 9999999999999887
Q ss_pred eeee
Q 014952 408 LLSI 411 (415)
Q Consensus 408 ~~~~ 411 (415)
...|
T Consensus 375 ~~~~ 378 (529)
T PRK07867 375 AERM 378 (529)
T ss_pred hhhh
Confidence 6544
No 83
>PRK08043 bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase; Validated
Probab=100.00 E-value=2.6e-47 Score=387.35 Aligned_cols=360 Identities=24% Similarity=0.364 Sum_probs=287.7
Q ss_pred CCCHHhHHHhhhccCCC-CcEEEeCCCCCeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHHhCC
Q 014952 24 HLPLHTYCFENISQFAD-RPCIINGPTGDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGA 102 (415)
Q Consensus 24 ~~tl~~~l~~~a~~~p~-~~a~~~~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~ 102 (415)
..|+.+.|.+.++++|+ ++++.+. ..+.+||+||.++++++|+.|++. +++||+|+++++|++++++++|||+++|+
T Consensus 203 ~~t~~~~l~~~~~~~p~~~~a~~~~-~~~~~Ty~el~~~~~~lA~~L~~~-~~~gd~Val~~~n~~e~~~~~lA~~~~G~ 280 (718)
T PRK08043 203 RETLYEALLSAQYRYGAGKPCIEDV-NFTPDSYRKLLKKTLFVGRILEKY-SVEGERIGLMLPNATISAAVIFGASLRRR 280 (718)
T ss_pred CCCHHHHHHHHHHHhCCCCcceEcC-CCCcccHHHHHHHHHHHHHHHHHh-cCCCceEEEEcCCcHHHHHHHHHHHHcCC
Confidence 47899999999999998 5777653 247899999999999999999987 59999999999999999999999999999
Q ss_pred eEeecCCCCCHHHHHHHHHhcCceEEEEcccchHHHH--hhhhh-cCceEEEeCCCCCCccchhh--hh-hhcccCCCCc
Q 014952 103 TSTTANPFYTPPEIAKQAIASKAKIIITQAVYNDKVR--DLSEH-HGARIVTIDPPPENCLHFSE--LI-TQADENEIPA 176 (415)
Q Consensus 103 ~~v~l~~~~~~~~~~~~l~~~~~~~vl~~~~~~~~~~--~~~~~-~~~~~i~~~~~~~~~~~~~~--l~-~~~~~~~~~~ 176 (415)
+++|+++.++.+++.++++++++++++++.+..+... ..... .....+.+++... ...+.+ .. ..........
T Consensus 281 v~vpl~~~~~~~~l~~~l~~s~~~~vi~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 359 (718)
T PRK08043 281 IPAMMNYTAGVKGLTSAITAAEIKTIFTSRQFLDKGKLWHLPEQLTQVRWVYLEDLKD-DVTTADKLWIFAHLLMPRLAQ 359 (718)
T ss_pred cccccccCcCHHHHHHHHHHcCCcEEEEcHHHHhhccCCChhhhhccccEEEhhhhhh-hcchhHHHHHHHHHhCCcccc
Confidence 9999999999999999999999999999876544211 11111 1123333332110 001111 00 0000011111
Q ss_pred ccCCCCCeEEEecCCCCCCCCceeeechHHHHHHHhhhhcCCCCCccCCCCcEEEEccchHHHHhhHHHHHHHHHcCcEE
Q 014952 177 VKINPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAI 256 (415)
Q Consensus 177 ~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~l~~l~~G~~~ 256 (415)
....++++++|+|||||||.||+|+++|.++......... .+.+.++|++++.+|++|.+++...++.++..|+++
T Consensus 360 ~~~~~~d~a~i~~TSGTTG~PKgv~~sh~~l~~~~~~~~~----~~~~~~~d~~l~~~Pl~h~~g~~~~~~~~l~~G~~v 435 (718)
T PRK08043 360 VKQQPEDAALILFTSGSEGHPKGVVHSHKSLLANVEQIKT----IADFTPNDRFMSALPLFHSFGLTVGLFTPLLTGAEV 435 (718)
T ss_pred CCCCCCCeEEEEECCCCCCCCCEEEEcHHHHHHHHHHHHH----hhCCCccCeEEEcCcchhhhhhHHHHHHHHHcCCEE
Confidence 2346789999999999999999999999999988777665 446788999999999999999876788999999999
Q ss_pred EEcCC-CCHHHHHHHHHhcCceeeecchHHHHHHHcCCCCCCCCcccceeeeecCCCCCHHHHHHHHhhCCCCccccccc
Q 014952 257 LIMQK-FDIVKLMELVQKYKVTVAPFVPPIVLAVAKSGDVDKYDMSSIRTVMSGAAPMGKELEDAVRAKLPHAKLGQGYG 335 (415)
Q Consensus 257 v~~~~-~~~~~~~~~l~~~~~t~l~~~p~~l~~l~~~~~~~~~~l~~lr~v~~gG~~l~~~~~~~~~~~~~~~~~~~~YG 335 (415)
++.+. +++..+.+.++++++|++.++|.++..+.+.. ...++++||.+++||+++++++.+.+++.+ ++++++.||
T Consensus 436 v~~~~~~~~~~~~~~i~~~~vt~~~~~p~~~~~l~~~~--~~~~~~~lr~i~~gg~~l~~~~~~~~~~~~-g~~l~~~YG 512 (718)
T PRK08043 436 FLYPSPLHYRIVPELVYDRNCTVLFGTSTFLGNYARFA--NPYDFARLRYVVAGAEKLQESTKQLWQDKF-GLRILEGYG 512 (718)
T ss_pred EEeCCcccHHHHHHHHHhcCCeEEEchHHHHHHhhhhc--CcccccceEEEEEeCccCCHHHHHHHHHHc-CCCeecccC
Confidence 98874 57788899999999999999999998876642 345678999999999999999999999999 899999999
Q ss_pred cccCCccccccccccCCccccCCCcccccccCCeEEEEeCCCCCCCCCCCceeEEEecCccccccccC
Q 014952 336 MTEAGPVLSMCLAFAKEPFEIKSGACGTVVRNAEMKIVDPDTGISLPRNQAGEICIRGAQIMKGTYHI 403 (415)
Q Consensus 336 ~tE~~~~~~~~~~~~~~~~~~~~~~~G~p~~~~~v~i~d~~~~~~~~~g~~Gel~v~~~~~~~gY~~~ 403 (415)
+||+++..+.. .+.....+++|+|+|+++++|+|++ + .++.|||+++|++++.|||++
T Consensus 513 ~TE~~~~~~~~-----~~~~~~~~svG~p~pg~~~~i~d~~-~----~~~~Gel~v~g~~v~~GY~~~ 570 (718)
T PRK08043 513 VTECAPVVSIN-----VPMAAKPGTVGRILPGMDARLLSVP-G----IEQGGRLQLKGPNIMNGYLRV 570 (718)
T ss_pred cccccceEEec-----CCcccCCCCCCCcCCCCeeEEecCC-C----CCCceEEEEecCCccccccCC
Confidence 99998655433 1223457899999999999999954 3 256699999999999999993
No 84
>PRK05691 peptide synthase; Validated
Probab=100.00 E-value=1.1e-47 Score=446.05 Aligned_cols=369 Identities=20% Similarity=0.289 Sum_probs=311.6
Q ss_pred CCCCCHHhHHHhhhccCCCCcEEEeCCCCCeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHHhC
Q 014952 22 PNHLPLHTYCFENISQFADRPCIINGPTGDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIG 101 (415)
Q Consensus 22 ~~~~tl~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G 101 (415)
|...++++.+.++++++|+++|+++. +..+||+||.++++++|+.|+++|+++|++|+|+++++.+++++++|++++|
T Consensus 3717 ~~~~~~~~~~~~~~~~~p~~~Av~~~--~~~~tY~eL~~~~~~la~~L~~~gv~~~~~V~v~~~~s~~~~v~~lavlkaG 3794 (4334)
T PRK05691 3717 PLEQSYVRLFEAQVAAHPQRIAASCL--DQQWSYAELNRAANRLGHALRAAGVGVDQPVALLAERGLDLLGMIVGSFKAG 3794 (4334)
T ss_pred ccccCHHHHHHHHHHhCCCceEEEcC--CCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHHHhhC
Confidence 44679999999999999999999998 8899999999999999999999999999999999999999999999999999
Q ss_pred CeEeecCCCCCHHHHHHHHHhcCceEEEEcccchHHHHhhhhhcC----ceEEEeCCCCCCccchhhhhhhcccCCCCcc
Q 014952 102 ATSTTANPFYTPPEIAKQAIASKAKIIITQAVYNDKVRDLSEHHG----ARIVTIDPPPENCLHFSELITQADENEIPAV 177 (415)
Q Consensus 102 ~~~v~l~~~~~~~~~~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~----~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~~ 177 (415)
++++|++|+++.+++.++++++++.+++++............... ..++..+. ..........+..
T Consensus 3795 ~a~vpld~~~p~~r~~~il~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~ 3864 (4334)
T PRK05691 3795 AGYLPLDPGLPAQRLQRIIELSRTPVLVCSAACREQARALLDELGCANRPRLLVWEE----------VQAGEVASHNPGI 3864 (4334)
T ss_pred cEEeCCCCCChHHHHHHHHHhcCCCEEEecCcccchhhhhhcccccccccceeeecc----------cccccccccCCCC
Confidence 999999999999999999999999999999876554333321111 11222111 1011111122233
Q ss_pred cCCCCCeEEEecCCCCCCCCceeeechHHHHHHHhhhhcCCCCCccCCCCcEEEEccchHHHHhhHHHHHHHHHcCcEEE
Q 014952 178 KINPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAIL 257 (415)
Q Consensus 178 ~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~l~~l~~G~~~v 257 (415)
...+++.|||+|||||||.||||+++|+++.+.+.+... .+.+++.++++...++++..+.+ .++.++..|++++
T Consensus 3865 ~~~~~~~ayvi~TSGSTG~PKGV~~~h~~~~~~~~~~~~----~~~~~~~~~~~~~~s~~fd~s~~-~~~~~l~~G~~l~ 3939 (4334)
T PRK05691 3865 YSGPDNLAYVIYTSGSTGLPKGVMVEQRGMLNNQLSKVP----YLALSEADVIAQTASQSFDISVW-QFLAAPLFGARVE 3939 (4334)
T ss_pred CCCCCceEEEEECCCCCCCCCEEEeehHHHHHHHHHHHH----hcCCCccceEEEecCCchhHHHH-HHHHHHhCCCEEE
Confidence 457899999999999999999999999999999888776 55789999999999999999988 5889999999999
Q ss_pred EcCC---CCHHHHHHHHHhcCceeeecchHHHHHHHcCCCCCCCCcccceeeeecCCCCCHHHHHHHHhhCCCCcccccc
Q 014952 258 IMQK---FDIVKLMELVQKYKVTVAPFVPPIVLAVAKSGDVDKYDMSSIRTVMSGAAPMGKELEDAVRAKLPHAKLGQGY 334 (415)
Q Consensus 258 ~~~~---~~~~~~~~~l~~~~~t~l~~~p~~l~~l~~~~~~~~~~l~~lr~v~~gG~~l~~~~~~~~~~~~~~~~~~~~Y 334 (415)
+++. .++..+.+.++++++|++.++|+++..++... ...+++||.+++||++++.++.+++.+.++++++++.|
T Consensus 3940 i~~~~~~~~~~~l~~~~~~~~vt~~~~~Ps~~~~l~~~~---~~~~~~lr~~~~gGe~l~~~~~~~~~~~~~~~~l~n~Y 4016 (4334)
T PRK05691 3940 IVPNAIAHDPQGLLAHVQAQGITVLESVPSLIQGMLAED---RQALDGLRWMLPTGEAMPPELARQWLQRYPQIGLVNAY 4016 (4334)
T ss_pred EcCccccCCHHHHHHHHHHcCCeEEEeCHHHHHHHHhhc---cccCCCceEEEecCCcCCHHHHHHHHHhCCCCeEEeCc
Confidence 9864 57899999999999999999999999887542 23468999999999999999999999998899999999
Q ss_pred ccccCCccccccccccCCccccCCCcccccccCCeEEEEeCCCCCCCCCCCceeEEEecCccccccccCCcceeeeee
Q 014952 335 GMTEAGPVLSMCLAFAKEPFEIKSGACGTVVRNAEMKIVDPDTGISLPRNQAGEICIRGAQIMKGTYHIYAPFLLSIV 412 (415)
Q Consensus 335 G~tE~~~~~~~~~~~~~~~~~~~~~~~G~p~~~~~v~i~d~~~~~~~~~g~~Gel~v~~~~~~~gY~~~~~~~~~~~~ 412 (415)
|+||++..++...... .........+|+|++++++.|+| +.++++|.|.+|||+|+|+.+++||+|+|+.|..+|+
T Consensus 4017 G~TE~t~~~~~~~~~~-~~~~~~~~~iG~p~~~~~~~v~d-~~~~~~p~g~~GEL~i~G~~v~~GY~~~~~~t~~~f~ 4092 (4334)
T PRK05691 4017 GPAECSDDVAFFRVDL-ASTRGSYLPIGSPTDNNRLYLLD-EALELVPLGAVGELCVAGTGVGRGYVGDPLRTALAFV 4092 (4334)
T ss_pred cCccceeEEEEEEccc-ccccCCcCCCCCccCCCEEEEEC-CCCCCCCCCCceEEEEecccccccccCCcccchhhcc
Confidence 9999996554432111 11122345799999999999999 6699999999999999999999999999999999996
No 85
>KOG1180 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=100.00 E-value=4e-48 Score=350.12 Aligned_cols=387 Identities=24% Similarity=0.348 Sum_probs=322.7
Q ss_pred CCCCCCCCCCHHhHHHhhhccCCCCcEEEeCC----------CC-----------CeeeHHHHHHHHHHHHHHHHHcCCC
Q 014952 17 PDIYIPNHLPLHTYCFENISQFADRPCIINGP----------TG-----------DVYTYADVELTSRKVAAGLSKLGVQ 75 (415)
Q Consensus 17 ~~~~~~~~~tl~~~l~~~a~~~p~~~a~~~~~----------~~-----------~~~Ty~el~~~~~~~a~~L~~~g~~ 75 (415)
-+.+.+.--|+.+.+++.++.+.++.++-..+ ++ ..+||.|+..++.++|.+|.++|++
T Consensus 33 ~~~~~~g~~Tl~~~~~~~~~k~g~~~~mGtR~li~~h~ek~~dGK~f~k~~Lg~Y~w~sy~ev~~~~~~~gsGL~~lG~k 112 (678)
T KOG1180|consen 33 VSPPNPGASTLYELFEECVKKFGKKDAMGTRELIKEHEEKQVDGKTFEKYELGDYKWMSYNEVYERVHNFGSGLVKLGLK 112 (678)
T ss_pred cCCCCCCcccHHHHHHHHHHhcCCCccccHHHHHHHHhhccCCCeEEEEEeccceeeecHHHHHHHHHHHHHHHHHhCCC
Confidence 34555667899999999999999999985321 11 4689999999999999999999999
Q ss_pred CCCE-EEEEcCCchhHHHHHHHHHHhCCeEeecCCCCCHHHHHHHHHhcCceEEEEcccchHHHHhhhhhcC-c-eEEEe
Q 014952 76 KGDV-IMLLLQNCPQFVFAFLGASYIGATSTTANPFYTPPEIAKQAIASKAKIIITQAVYNDKVRDLSEHHG-A-RIVTI 152 (415)
Q Consensus 76 ~g~~-V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~-~-~~i~~ 152 (415)
++++ ++|+++.+.+|.++++||++.+..+|.+-.++..+.+.+-+++++...++++.+.++++........ + .+|.+
T Consensus 113 ~~e~k~~iFa~TraeWm~ta~gC~~q~ipvVT~Y~TLGeeal~hsl~Et~~~~i~T~~~LL~kl~~~l~~~~~vk~II~~ 192 (678)
T KOG1180|consen 113 PKETKIAIFAETRAEWMITAQGCFSQNIPVVTAYATLGEEALIHSLNETESTAIFTDSELLPKLKAPLKQAKTVKHIIYF 192 (678)
T ss_pred CCCCeEEEEecchHHHHHHHHHHHhcCCeEEEEehhcChhhhhhhhccccceEEEeCHHHHHHHHHHHhccCceeEEEEe
Confidence 7776 9999999999999999999999999999999999999999999999999999999988777654433 4 46777
Q ss_pred CC---------------CCCCccchhhhhhhcccCCCCcccCCCCCeEEEecCCCCCCCCceeeechHHHHHHHhhhhcC
Q 014952 153 DP---------------PPENCLHFSELITQADENEIPAVKINPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDG 217 (415)
Q Consensus 153 ~~---------------~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~ 217 (415)
+. .....+++++++.-..+...++.+..++|+|+|||||||||.||||+++|+|+++.+....+.
T Consensus 193 d~id~~~~~~~v~~i~~p~i~i~Sf~~v~~lG~~~~~~~~~P~p~Dia~IMYTSGSTG~PKGVml~H~NiVA~~~G~~~~ 272 (678)
T KOG1180|consen 193 DPIDYDAAKDDVNSIVRPDIKIISFDDVEKLGKENEIPPHPPKPSDIACIMYTSGSTGLPKGVMLTHSNIVAGVTGVGEN 272 (678)
T ss_pred cCCCCccchhhhhhhccCCeEEEEHHHHHhhCCcCCCCCCCCCCCceEEEEEcCCCCCCCceEEEecccHHhhhhhhccc
Confidence 63 123457788886666666566777789999999999999999999999999999998888774
Q ss_pred CCCCccCCCCcEEEEccchHHHHhhHHHHHHHHHcCcEEEEcCCCCH--------HHHHHHHHhcCceeeecchHHHHHH
Q 014952 218 ENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIMQKFDI--------VKLMELVQKYKVTVAPFVPPIVLAV 289 (415)
Q Consensus 218 ~~~~~~~~~~~~~~~~~pl~~~~g~~~~~l~~l~~G~~~v~~~~~~~--------~~~~~~l~~~~~t~l~~~p~~l~~l 289 (415)
. ..+++.|+++.++|+.|++.+. .=+.++.-|+.+...++.+. ...-..+...|||++.++|.++.++
T Consensus 273 v---~~lg~~D~yi~yLPLAHIlEl~-aE~~~ft~G~~iGY~S~~TLtdts~ki~kg~kGD~~~lkPTiM~~VpAV~drV 348 (678)
T KOG1180|consen 273 V---PELGPKDRYIAYLPLAHILELT-AELVCFTWGGRIGYSSPLTLTDTSSKIKKGCKGDLTELKPTIMAAVPAVMDRV 348 (678)
T ss_pred C---cccCCCceEEEechHHHHHHHH-HHHHHHhhCCEeecCCcceecccchhhccCCcCccccccchhhhhhHHHHHHH
Confidence 3 3689999999999999999998 46788999999998765211 1233466788999999999988665
Q ss_pred HcC--------------------------CCCC----------------CCCcccceeeeecCCCCCHHHHHHHHhhCCC
Q 014952 290 AKS--------------------------GDVD----------------KYDMSSIRTVMSGAAPMGKELEDAVRAKLPH 327 (415)
Q Consensus 290 ~~~--------------------------~~~~----------------~~~l~~lr~v~~gG~~l~~~~~~~~~~~~~~ 327 (415)
-+. .+.. ...-.+||.+++||+++++++++.+...+ .
T Consensus 349 rKgVl~kV~~~~~~~k~lF~~aY~~K~~~~~~~g~~s~~ld~lVFkKIr~~lGG~lR~~LsGGapLS~dtQrF~nic~-C 427 (678)
T KOG1180|consen 349 RKGVLSKVNAMPGLQKKLFWTAYERKLSLIERNGPGSPLLDALVFKKIRALLGGNLRYILSGGAPLSPDTQRFMNICF-C 427 (678)
T ss_pred HHHHHHHHhhchHHHHHHHHHHHHHHHHHHhccCCchhhHHHHHHHHHHHHhCCceEEEEeCCCCCCHHHHHHHHHhc-c
Confidence 430 0000 01125899999999999999999999999 8
Q ss_pred CccccccccccCCccccccccccCCccccCCCcccccccCCeEEEEeCCCCCCCCCCC--ceeEEEecCccccccccCCc
Q 014952 328 AKLGQGYGMTEAGPVLSMCLAFAKEPFEIKSGACGTVVRNAEMKIVDPDTGISLPRNQ--AGEICIRGAQIMKGTYHIYA 405 (415)
Q Consensus 328 ~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~G~p~~~~~v~i~d~~~~~~~~~g~--~Gel~v~~~~~~~gY~~~~~ 405 (415)
+++.++||.||+++..++. ++.+...+.+|.|++.++++++|-++|...+.+. .|||+++|+++..|||+||+
T Consensus 428 ~Pv~qGYGLTEtca~~tv~-----e~~d~~~g~vG~pl~c~eiKLvdw~EgGY~~~~~PPrGEI~i~G~~vt~gY~kn~e 502 (678)
T KOG1180|consen 428 CPVLQGYGLTETCAAATVL-----EPEDFSTGRVGAPLPCCEIKLVDWEEGGYFAKNKPPRGEILIGGPNVTMGYYKNEE 502 (678)
T ss_pred ccccccccccchhcccEec-----ChhhcccccccCCccceEEEEEEhhhcCccCCCCCCCceEEecCCccChhhhCChh
Confidence 8999999999999766665 6677788899999999999999977777766665 89999999999999999999
Q ss_pred ceeeeeee
Q 014952 406 PFLLSIVC 413 (415)
Q Consensus 406 ~~~~~~~~ 413 (415)
.|..+|.-
T Consensus 503 kT~e~ft~ 510 (678)
T KOG1180|consen 503 KTKEDFTV 510 (678)
T ss_pred hhhhhcee
Confidence 99999864
No 86
>PLN03102 acyl-activating enzyme; Provisional
Probab=100.00 E-value=9e-47 Score=374.72 Aligned_cols=376 Identities=23% Similarity=0.305 Sum_probs=292.9
Q ss_pred CCHHhHHHhhhccCCCCcEEEeCCCCCeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHHhCCeE
Q 014952 25 LPLHTYCFENISQFADRPCIINGPTGDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGATS 104 (415)
Q Consensus 25 ~tl~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~ 104 (415)
.|+.++|.+.++++|+++|++.. +.++||+||.++++++|+.|.++|+++||+|+|+++|++++++++|||+++|+++
T Consensus 14 ~~~~~~l~~~~~~~p~~~Al~~~--~~~~Ty~eL~~~~~~~a~~L~~~Gl~~gd~Vai~~~n~~e~~~~~la~~~~G~~~ 91 (579)
T PLN03102 14 LTPITFLKRASECYPNRTSIIYG--KTRFTWPQTYDRCCRLAASLISLNITKNDVVSVLAPNTPAMYEMHFAVPMAGAVL 91 (579)
T ss_pred ccHHHHHHHHHHhCCCCeEEEEC--CcEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHHHHhcCcEE
Confidence 67999999999999999999987 7899999999999999999999999999999999999999999999999999999
Q ss_pred eecCCCCCHHHHHHHHHhcCceEEEEcccchHHHHhhhhh-------cCceEEEeCCCC------CCccchhhhhhhccc
Q 014952 105 TTANPFYTPPEIAKQAIASKAKIIITQAVYNDKVRDLSEH-------HGARIVTIDPPP------ENCLHFSELITQADE 171 (415)
Q Consensus 105 v~l~~~~~~~~~~~~l~~~~~~~vl~~~~~~~~~~~~~~~-------~~~~~i~~~~~~------~~~~~~~~l~~~~~~ 171 (415)
+|+++.++.+++.++++.++++++|++.+..+.+..+... ...+++.++... ....+++++......
T Consensus 92 vpl~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (579)
T PLN03102 92 NPINTRLDATSIAAILRHAKPKILFVDRSFEPLAREVLHLLSSEDSNLNLPVIFIHEIDFPKRPSSEELDYECLIQRGEP 171 (579)
T ss_pred eeccccCCHHHHHHHHhccCCeEEEEChhhHHHHHHHHhhccccccccCceEEEecccccccCCcccccCHHHHHhccCC
Confidence 9999999999999999999999999988776665544321 124455554211 122344554222111
Q ss_pred CCCC----cccCCCCCeEEEecCCCCCCCCceeeechHHHHHHHhhhhcCCCCCccCCCCcEEEEccchHHHHhhHHHHH
Q 014952 172 NEIP----AVKINPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLL 247 (415)
Q Consensus 172 ~~~~----~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~l 247 (415)
.... .....++++++|+|||||||.||+|.++|.++......... ...+...++.+..+|++|..++. ..+
T Consensus 172 ~~~~~~~~~~~~~~~d~~~il~TSGTTG~PK~v~~s~~~~~~~~~~~~~----~~~~~~~~~~l~~~pl~h~~g~~-~~~ 246 (579)
T PLN03102 172 TPSLVARMFRIQDEHDPISLNYTSGTTADPKGVVISHRGAYLSTLSAII----GWEMGTCPVYLWTLPMFHCNGWT-FTW 246 (579)
T ss_pred CCcccccccccCCCCCcEEEEeCCcCCCCCCEEEEecHHHHHHHHHHHh----hcCCCCCCeEEecCChhhhcchh-HHH
Confidence 1110 11245689999999999999999999999987544333322 22355677889999999999987 467
Q ss_pred HHHHcCcEEEEcCCCCHHHHHHHHHhcCceeeecchHHHHHHHcCCCCCCCCcccceeeeecCCCCCHHHHHHHHhhCCC
Q 014952 248 CALRVGAAILIMQKFDIVKLMELVQKYKVTVAPFVPPIVLAVAKSGDVDKYDMSSIRTVMSGAAPMGKELEDAVRAKLPH 327 (415)
Q Consensus 248 ~~l~~G~~~v~~~~~~~~~~~~~l~~~~~t~l~~~p~~l~~l~~~~~~~~~~l~~lr~v~~gG~~l~~~~~~~~~~~~~~ 327 (415)
.++..|+++++.+.+++..+++.|+++++|++.++|.++..|.+....+...+++++.+++||++++.++.+++.+ + +
T Consensus 247 ~~~~~g~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~-~-g 324 (579)
T PLN03102 247 GTAARGGTSVCMRHVTAPEIYKNIEMHNVTHMCCVPTVFNILLKGNSLDLSPRSGPVHVLTGGSPPPAALVKKVQR-L-G 324 (579)
T ss_pred HHHHhcCcEEeeccCChHHHHHHHHHcCCeEEEeChHHHHHHHhCcccccCCcccceEEEECCCCCCHHHHHHHHH-c-C
Confidence 7888999999888889999999999999999999999999998865444444567888999999999999999875 5 7
Q ss_pred CccccccccccCCcccccccccc------CCc---cccCCCcccccccCCeEEEEeCCCCCCCCC--CCceeEEEecCcc
Q 014952 328 AKLGQGYGMTEAGPVLSMCLAFA------KEP---FEIKSGACGTVVRNAEMKIVDPDTGISLPR--NQAGEICIRGAQI 396 (415)
Q Consensus 328 ~~~~~~YG~tE~~~~~~~~~~~~------~~~---~~~~~~~~G~p~~~~~v~i~d~~~~~~~~~--g~~Gel~v~~~~~ 396 (415)
.++++.||+||+++.+..+.... ... .....+..+.+++ .++++|++++++++. ++.|||+|+||.+
T Consensus 325 ~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~--~v~i~~~~~~~~v~~~~~~~GEl~v~g~~~ 402 (579)
T PLN03102 325 FQVMHAYGLTEATGPVLFCEWQDEWNRLPENQQMELKARQGVSILGLA--DVDVKNKETQESVPRDGKTMGEIVIKGSSI 402 (579)
T ss_pred CeEEeecCccccCccccccccccccccCCcccccccccCCCccccccc--ceEEeccccccccCCCCCCceEEEEECcch
Confidence 89999999999986544321100 000 0112233344444 566777667777775 3689999999999
Q ss_pred ccccccCCcceeeee
Q 014952 397 MKGTYHIYAPFLLSI 411 (415)
Q Consensus 397 ~~gY~~~~~~~~~~~ 411 (415)
+.|||++|+.+...|
T Consensus 403 ~~GY~~~~~~t~~~f 417 (579)
T PLN03102 403 MKGYLKNPKATSEAF 417 (579)
T ss_pred hhhhcCChhhhHhhh
Confidence 999999999887765
No 87
>TIGR01217 ac_ac_CoA_syn acetoacetyl-CoA synthase. This enzyme catalyzes the first step of the mevalonate pathway of IPP biosynthesis. Most bacteria do not use this pathway, but rather the deoxyxylulose pathway.
Probab=100.00 E-value=1e-46 Score=378.39 Aligned_cols=376 Identities=19% Similarity=0.227 Sum_probs=288.3
Q ss_pred CCCCCCCCCCHHhHHHhhhccCCCCcEEEeCCC---CCeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHH
Q 014952 17 PDIYIPNHLPLHTYCFENISQFADRPCIINGPT---GDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFA 93 (415)
Q Consensus 17 ~~~~~~~~~tl~~~l~~~a~~~p~~~a~~~~~~---~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~ 93 (415)
+.|.....+|+.+.+.++ .++++|++..+. .+.+||+||.++++++|+.|+++|+++||+|+++++|+++++++
T Consensus 79 ~~wf~~~~~n~~~~~~~~---~~~~~a~~~~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GdrV~i~~~n~~e~~~~ 155 (652)
T TIGR01217 79 AQWFPGARLNYAENLLRA---AGTEPALLYVDETHEPAPVTWAELRRQVASLAAALRALGVRPGDRVSGYLPNIPQAVVA 155 (652)
T ss_pred CEECCCCeeeHHHHHhcc---CCCCeEEEEECCCCCeeEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHH
Confidence 466666678888888764 468888876532 25899999999999999999999999999999999999999999
Q ss_pred HHHHHHhCCeEeecCCCCCHHHHHHHHHhcCceEEEEcccc---------hHHHHhhhhhcC--ceEEEeCCCC------
Q 014952 94 FLGASYIGATSTTANPFYTPPEIAKQAIASKAKIIITQAVY---------NDKVRDLSEHHG--ARIVTIDPPP------ 156 (415)
Q Consensus 94 ~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~vl~~~~~---------~~~~~~~~~~~~--~~~i~~~~~~------ 156 (415)
+|||+++|++++|+++.++.+++.+++++++++++|+++.. .+.+.+.....+ ..++.++...
T Consensus 156 ~lA~~~~Gav~vp~~~~~~~~~l~~~l~~~~~k~li~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 235 (652)
T TIGR01217 156 MLATASVGAIWSSCSPDFGARGVLDRFQQIEPKLLFTVDGYRYNGKEHDRRDKVAEVRKELPTLRAVVHIPYLGPRETEA 235 (652)
T ss_pred HHHHHHhCeEEEecCCCCCHHHHHHHHHhcCCcEEEEccccccCCcccchHHHHHHHHhcCCCccEEEEEeCCCCccccc
Confidence 99999999999999999999999999999999999998653 233333332222 2344443110
Q ss_pred ---CCccchhhhhhhcccCCCCcccCCCCCeEEEecCCCCCCCCceeeechHHHHHH-HhhhhcCCCCCccCCCCcEEEE
Q 014952 157 ---ENCLHFSELITQADENEIPAVKINPDDVVALPYSSGTTGLPKGVMLTHKGLVTS-VAQQVDGENPNLYLHKEDVILC 232 (415)
Q Consensus 157 ---~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~ 232 (415)
.....++++................+++++|+|||||||.||||+++|.+++.. ...... .+++.++|++++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ilyTSGTTG~PKgV~~sh~~~~~~~~~~~~~----~~~~~~~d~~~~ 311 (652)
T TIGR01217 236 PKIDGALDLEDFTAAAQAAELVFEQLPFDHPLWILFSSGTTGLPKCIVHSAGGTLVQHLKEHGL----HCDLGPGDRLFY 311 (652)
T ss_pred ccccCcccHHHHHhcccCCCCCceecCCCCCEEEEEcCCCCCCCCeEEecccHHHHHHHHHHHh----ccCCCCCcEEEE
Confidence 123345665322111122233456689999999999999999999999987543 333332 346788999999
Q ss_pred ccchHHHHhhHHHHHHHHHcCcEEEEcCC----CCHHHHHHHHHhcCceeeecchHHHHHHHcCC--CCCCCCcccceee
Q 014952 233 VLPLFHIYSLNSVLLCALRVGAAILIMQK----FDIVKLMELVQKYKVTVAPFVPPIVLAVAKSG--DVDKYDMSSIRTV 306 (415)
Q Consensus 233 ~~pl~~~~g~~~~~l~~l~~G~~~v~~~~----~~~~~~~~~l~~~~~t~l~~~p~~l~~l~~~~--~~~~~~l~~lr~v 306 (415)
..|+.|..+.. ++.++..|+++++.+. .++..+++.++++++|++..+|.+++.+.+.. .....++++||.+
T Consensus 312 ~~~~~~~~~~~--~~~~l~~G~t~vl~~g~~~~~~~~~~~~~i~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~l~sLr~i 389 (652)
T TIGR01217 312 YTTTGWMMWNW--LVSGLATGATLVLYDGSPGFPATNVLWDIAERTGATLFGTSAKYVMACRKAGVHPARTHDLSALQCV 389 (652)
T ss_pred eCCcchhhhHH--HHHHHhcCcEEEEECCCCCCCCchHHHHHHHHhCCeEEecCHHHHHHHHhcCCCccccCChhheeEE
Confidence 99999986432 5589999999999752 37889999999999999988777776665432 1234678999999
Q ss_pred eecCCCCCHHHHHHHHhhCC-CCccccccccccCCccccccccccCCccccCCCcccccccCCeEEEEeCCCCCCCCCCC
Q 014952 307 MSGAAPMGKELEDAVRAKLP-HAKLGQGYGMTEAGPVLSMCLAFAKEPFEIKSGACGTVVRNAEMKIVDPDTGISLPRNQ 385 (415)
Q Consensus 307 ~~gG~~l~~~~~~~~~~~~~-~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~G~p~~~~~v~i~d~~~~~~~~~g~ 385 (415)
++||+++++++.+++.+.++ +..+.+.||+||+++..... ........+++|.|.+|++++|+| ++|+++ .|+
T Consensus 390 ~~gGe~l~~~~~~~~~~~~~~~~~~~~~yG~TE~~~~~~~~----~~~~~~~~g~~g~p~~g~~v~ivd-~~g~~~-~g~ 463 (652)
T TIGR01217 390 ASTGSPLPPDGFRWVYDEIKADVWLASISGGTDICSCFAGA----NPTLPVHIGEIQAPGLGTAVQSWD-PEGKPV-TGE 463 (652)
T ss_pred EeecCCCCHHHHHHHHHHhCCCceEEeccCHHHHhccccCC----CCCCCCcCCccCCCcCCCceEEEC-CCCCCC-CCC
Confidence 99999999999999999883 24567889999975322211 111233467899999999999999 558888 599
Q ss_pred ceeEEEecC--ccccccccCCcce
Q 014952 386 AGEICIRGA--QIMKGTYHIYAPF 407 (415)
Q Consensus 386 ~Gel~v~~~--~~~~gY~~~~~~~ 407 (415)
.|||+++|| .++.|||++|+++
T Consensus 464 ~GEl~v~gp~p~~~~gy~~~~~~t 487 (652)
T TIGR01217 464 VGELVCTNPMPSMPIRFWNDPDGS 487 (652)
T ss_pred ccEEEEecCCCccccceeCCCccc
Confidence 999999996 6899999999865
No 88
>PRK13383 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=1.2e-46 Score=369.70 Aligned_cols=354 Identities=18% Similarity=0.247 Sum_probs=290.4
Q ss_pred CCCHHhHHHhhhccCCCCcEEEeCCCCCeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHHhCCe
Q 014952 24 HLPLHTYCFENISQFADRPCIINGPTGDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGAT 103 (415)
Q Consensus 24 ~~tl~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~ 103 (415)
..|+.+.|.++++++|+++++++. ++.+||+||.++++++|+.|.+.|+++||+|+++++|+.++++++|||+++|++
T Consensus 34 ~~~~~~~~~~~a~~~p~~~a~~~~--~~~lTy~el~~~~~~la~~L~~~gi~~g~~V~i~~~~~~~~~~~~la~~~~G~v 111 (516)
T PRK13383 34 GTNPYTLLAVTAARWPGRTAIIDD--DGALSYRELQRATESLARRLTRDGVAPGRAVGVMCRNGRGFVTAVFAVGLLGAD 111 (516)
T ss_pred CCcHHHHHHHHHHHCCCCcEEEeC--CCcEeHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHHhCeE
Confidence 589999999999999999999986 779999999999999999999999999999999999999999999999999999
Q ss_pred EeecCCCCCHHHHHHHHHhcCceEEEEcccchHHHHhhhhhcCceEEEeCCCCCCccchhhhhhhcccCCCCcccCCCCC
Q 014952 104 STTANPFYTPPEIAKQAIASKAKIIITQAVYNDKVRDLSEHHGARIVTIDPPPENCLHFSELITQADENEIPAVKINPDD 183 (415)
Q Consensus 104 ~v~l~~~~~~~~~~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 183 (415)
++|+++.++.+++..++++++++++++++...+.+.... ..++.++.... .. ... ...+...++
T Consensus 112 ~vpl~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~----~~~~~~~~~~~------~~---~~~---~~~p~~~~~ 175 (516)
T PRK13383 112 VVPISTEFRSDALAAALRAHHISTVVADNEFAERIAGAD----DAVAVIDPATA------GA---EES---GGRPAVAAP 175 (516)
T ss_pred EEEcCccCCHHHHHHHHhcCCCCEEEEchhHHHHHHhhh----cceEEeccchh------hh---hcC---CCCCCCCCC
Confidence 999999999999999999999999999887665544321 12333332110 00 000 011123456
Q ss_pred eEEEecCCCCCCCCceeeechHHHHHHH--hhhhcCCCCCccCCCCcEEEEccchHHHHhhHHHHHHHHHcCcEEEEcCC
Q 014952 184 VVALPYSSGTTGLPKGVMLTHKGLVTSV--AQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIMQK 261 (415)
Q Consensus 184 ~a~i~~TSGtTG~pK~v~~t~~~l~~~~--~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~l~~l~~G~~~v~~~~ 261 (415)
.++|+|||||||.||+|.++|....... ..... .+.+..+++++..+|++|.+++. .++.++..|++++....
T Consensus 176 ~~~il~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~----~~~~~~~d~~~~~~pl~h~~g~~-~~~~~l~~G~~~~~~~~ 250 (516)
T PRK13383 176 GRIVLLTSGTTGKPKGVPRAPQLRSAVGVWVTILD----RTRLRTGSRISVAMPMFHGLGLG-MLMLTIALGGTVLTHRH 250 (516)
T ss_pred CcEEEECCCCCCCCCeeeecchhhhhhhhHHhHHh----hhccCCCCeEEEecCCcchhhHH-HHHHHHhcCCEEEECCC
Confidence 6799999999999999999997432111 11111 33567889999999999999987 47778999999999888
Q ss_pred CCHHHHHHHHHhcCceeeecchHHHHHHHcCCCC--CCCCcccceeeeecCCCCCHHHHHHHHhhCCCCccccccccccC
Q 014952 262 FDIVKLMELVQKYKVTVAPFVPPIVLAVAKSGDV--DKYDMSSIRTVMSGAAPMGKELEDAVRAKLPHAKLGQGYGMTEA 339 (415)
Q Consensus 262 ~~~~~~~~~l~~~~~t~l~~~p~~l~~l~~~~~~--~~~~l~~lr~v~~gG~~l~~~~~~~~~~~~~~~~~~~~YG~tE~ 339 (415)
++++.+++.++++++|.+.++|.++..+.+.... ....++++|.+++||+++++++.+++.+.| +..+++.||+||+
T Consensus 251 ~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~-g~~v~~~YG~tE~ 329 (516)
T PRK13383 251 FDAEAALAQASLHRADAFTAVPVVLARILELPPRVRARNPLPQLRVVMSSGDRLDPTLGQRFMDTY-GDILYNGYGSTEV 329 (516)
T ss_pred CCHHHHHHHHHHhCCcEEEecHHHHHHHHhccccccccCCCCceEEEEECCCCCCHHHHHHHHHHc-Cchhhhccccccc
Confidence 9999999999999999999999999999875432 223578999999999999999999999999 7889999999999
Q ss_pred CccccccccccCCccccCCCcccccccCCeEEEEeCCCCCCCCCCCceeEEEecCccccccccCCcc
Q 014952 340 GPVLSMCLAFAKEPFEIKSGACGTVVRNAEMKIVDPDTGISLPRNQAGEICIRGAQIMKGTYHIYAP 406 (415)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~G~p~~~~~v~i~d~~~~~~~~~g~~Gel~v~~~~~~~gY~~~~~~ 406 (415)
+.....+. .......+++|+|+|+++++|+| +++++++.|+.|||+++|+.++.||++++..
T Consensus 330 ~~~~~~~~----~~~~~~~~~~G~~~~~~~~~i~d-~~~~~~~~g~~Gel~v~g~~~~~~Y~~~~~~ 391 (516)
T PRK13383 330 GIGALATP----ADLRDAPETVGKPVAGCPVRILD-RNNRPVGPRVTGRIFVGGELAGTRYTDGGGK 391 (516)
T ss_pred ccceeccc----cccccCCCcccCCCCCcEEEEEC-CCCCCCCCCCceEEEEecCcccccccCCchh
Confidence 85443321 11233467899999999999999 5589999999999999999999999988653
No 89
>PRK05851 long-chain-fatty-acid--[acyl-carrier-protein] ligase; Validated
Probab=100.00 E-value=2.5e-47 Score=374.98 Aligned_cols=362 Identities=17% Similarity=0.232 Sum_probs=275.6
Q ss_pred CC-HHhHHHhhhccCCCCcEEEeCCCC--CeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHHhC
Q 014952 25 LP-LHTYCFENISQFADRPCIINGPTG--DVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIG 101 (415)
Q Consensus 25 ~t-l~~~l~~~a~~~p~~~a~~~~~~~--~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G 101 (415)
|| +.+.|.+.++++|+++++++.+.+ +++||+||.++++++|+.|.++ ++||+|+++++|++++++++|||+++|
T Consensus 1 ~~~~~~~l~~~~~~~~~~~a~~~~~~~~~~~~ty~el~~~~~~lA~~L~~~--~~g~~V~l~~~~~~e~~~~~la~~~~G 78 (525)
T PRK05851 1 MNELAAALSDAMTASGRDLVVLDRESGLWRRHPWPEVHGRAENVAARLLDR--DRPGAVGLVGEPTVELVAAIQGAWLAG 78 (525)
T ss_pred CchHHHHHHHHhcCCCCceEEeCCCCCcceeecHHHHHHHHHHHHHHHHhc--CCCCeEEEEcCCCHHHHHHHHHHHHcC
Confidence 45 788999999999999999987433 7899999999999999999998 799999999999999999999999999
Q ss_pred CeEeecCCCC--------CHHHHHHHHHhcCceEEEEcccchHHHHhhhhhcCceEEEeCCCCCCccchhhhhhhcccCC
Q 014952 102 ATSTTANPFY--------TPPEIAKQAIASKAKIIITQAVYNDKVRDLSEHHGARIVTIDPPPENCLHFSELITQADENE 173 (415)
Q Consensus 102 ~~~v~l~~~~--------~~~~~~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~ 173 (415)
++++ +++.. ..+++.+++.++++++++++....+.+..... . +.+.+ +... ... ...
T Consensus 79 ~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~--~---~~~~~-------~~~~-~~~-~~~ 143 (525)
T PRK05851 79 AAVS-ILPGPVRGADDGRWADATLTRFAGIGVRTVLSHGSHLERLRAVDS--S---VTVHD-------LATA-AHT-NRS 143 (525)
T ss_pred CCCc-CCCCCCCccchhhHHHHHHHHHHhcCCCEEEeCHHHHHHHHHhhc--c---ccccc-------cccc-ccc-ccc
Confidence 9865 44321 22455567889999999998776554433211 0 11110 0000 000 001
Q ss_pred CCcccCCCCCeEEEecCCCCCCCCceeeechHHHHHHHhhhhcCCCCCccCC-CCcEEEEccchHHHHhhHHHHHHHHHc
Q 014952 174 IPAVKINPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLH-KEDVILCVLPLFHIYSLNSVLLCALRV 252 (415)
Q Consensus 174 ~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~pl~~~~g~~~~~l~~l~~ 252 (415)
.+.....++++++|+|||||||.||+|+++|.++...+..... .+.+. ++|++++.+|++|.+++. .++.++..
T Consensus 144 ~~~~~~~~~d~a~i~~TSGTTG~PKgV~~th~~~~~~~~~~~~----~~~~~~~~d~~l~~~pl~h~~g~~-~~~~~l~~ 218 (525)
T PRK05851 144 ASLTPPDSGGPAVLQGTAGSTGTPRTAILSPGAVLSNLRGLNA----RVGLDAATDVGCSWLPLYHDMGLA-FLLTAALA 218 (525)
T ss_pred ccCCCCCCCCeEEEEeCCCCCCCCcEEEecHHHHHHHHHHHHH----HhCCCCCCCeEEEcCCCccCccHH-HHHHHHHc
Confidence 1112346789999999999999999999999999988877666 34566 889999999999999997 57889999
Q ss_pred CcEEEEcCC--C--CHHHHHHHHHhcCceeeecchHHHHHHHcCC-CCCCCCcccceeeeecCCCCCHHHHHHHHhh---
Q 014952 253 GAAILIMQK--F--DIVKLMELVQKYKVTVAPFVPPIVLAVAKSG-DVDKYDMSSIRTVMSGAAPMGKELEDAVRAK--- 324 (415)
Q Consensus 253 G~~~v~~~~--~--~~~~~~~~l~~~~~t~l~~~p~~l~~l~~~~-~~~~~~l~~lr~v~~gG~~l~~~~~~~~~~~--- 324 (415)
|+++++.+. + ++..+++.++++++|++...|.++..+.+.. .....++++||.+++||+++++++.+++.+.
T Consensus 219 G~~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~p~~~~~~l~~~~~~~~~~~l~~lr~~~~gG~~l~~~~~~~~~~~~~~ 298 (525)
T PRK05851 219 GAPLWLAPTTAFSASPFRWLSWLSDSRATLTAAPNFAYNLIGKYARRVSDVDLGALRVALNGGEPVDCDGFERFATAMAP 298 (525)
T ss_pred CCeEEEcCHHHHHHCHHHHHHHHHHhCCeEEeCCcHHHHHHHHhhccccCCCHHHhheeEeccccCCHHHHHHHHHHHhh
Confidence 999999763 3 6788999999999998855444444443322 2234568899999999999999999998875
Q ss_pred C--CCCccccccccccCCcccccccccc----------CCccccCCCcccccccCCeEEEEeCCCCCCCCCCCceeEEEe
Q 014952 325 L--PHAKLGQGYGMTEAGPVLSMCLAFA----------KEPFEIKSGACGTVVRNAEMKIVDPDTGISLPRNQAGEICIR 392 (415)
Q Consensus 325 ~--~~~~~~~~YG~tE~~~~~~~~~~~~----------~~~~~~~~~~~G~p~~~~~v~i~d~~~~~~~~~g~~Gel~v~ 392 (415)
+ +..++++.||+||++..++...... +.......+++|+|+||++++|+|++++.+++.|+.|||+++
T Consensus 299 ~g~~~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~p~~g~~v~i~d~~~~~~~~~g~~GEl~v~ 378 (525)
T PRK05851 299 FGFDAGAAAPSYGLAESTCAVTVPVPGIGLRVDEVTTDDGSGARRHAVLGNPIPGMEVRISPGDGAAGVAGREIGEIEIR 378 (525)
T ss_pred cCCChhhcccccchhhhceEEEecCCCCCceeeeeccccCcccceeeeecCCCCCcEEEEECCCCCccCCCCCeEEEEEe
Confidence 3 2245999999999986544321100 000112346899999999999999776677999999999999
Q ss_pred cCccccccccCCccee
Q 014952 393 GAQIMKGTYHIYAPFL 408 (415)
Q Consensus 393 ~~~~~~gY~~~~~~~~ 408 (415)
|++++.|||++|+.+.
T Consensus 379 g~~~~~GY~~~~~~~~ 394 (525)
T PRK05851 379 GASMMSGYLGQAPIDP 394 (525)
T ss_pred cCchhhccccCCccCC
Confidence 9999999999987653
No 90
>PRK07008 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=3.3e-46 Score=368.34 Aligned_cols=375 Identities=23% Similarity=0.327 Sum_probs=299.4
Q ss_pred CCHHhHHHhhhccCCCCcEEEeCCC--CCeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHHhCC
Q 014952 25 LPLHTYCFENISQFADRPCIINGPT--GDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGA 102 (415)
Q Consensus 25 ~tl~~~l~~~a~~~p~~~a~~~~~~--~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~ 102 (415)
.++.++|...++.+|++.++.+..+ .+.+||.||.++++++|++|.+.|+++||+|+++++|+.+++++++||+++|+
T Consensus 10 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~~d~v~i~~~~~~~~~~~~la~~~~G~ 89 (539)
T PRK07008 10 LLISSLIAHAARHAGDTEIVSRRVEGDIHRYTYRDCERRAKQLAQALAALGVEPGDRVGTLAWNGYRHLEAYYGVSGSGA 89 (539)
T ss_pred CCHHHHHHHHHhhCCCceEEEeeccCcceEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHHHHhcCc
Confidence 5789999999999999988876422 36899999999999999999999999999999999999999999999999999
Q ss_pred eEeecCCCCCHHHHHHHHHhcCceEEEEcccchHHHHhhhhhcC-c-eEEEeCCCC------CCccchhhhhhhcccCCC
Q 014952 103 TSTTANPFYTPPEIAKQAIASKAKIIITQAVYNDKVRDLSEHHG-A-RIVTIDPPP------ENCLHFSELITQADENEI 174 (415)
Q Consensus 103 ~~v~l~~~~~~~~~~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~-~-~~i~~~~~~------~~~~~~~~l~~~~~~~~~ 174 (415)
+++|++|..+.+++..+++.+++.+++++.+..+.+.+...... . .++.+.+.. .....++++... .....
T Consensus 90 ~~v~l~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~ 168 (539)
T PRK07008 90 VCHTINPRLFPEQIAYIVNHAEDRYVLFDLTFLPLVDALAPQCPNVKGWVAMTDAAHLPAGSTPLLCYETLVGA-QDGDY 168 (539)
T ss_pred EEeecccccCHHHHHHHHhccCCcEEEEcchhHHHHHHHHhhCCCceEEEEEccCCccccCCcccccHHHHhcc-cCCCc
Confidence 99999999999999999999999999999887766555433222 2 223332211 123445555222 11122
Q ss_pred CcccCCCCCeEEEecCCCCCCCCceeeechHHHHHHHhhhhcCCCCCccCCCCcEEEEccchHHHHhhHHHHHHHHHcCc
Q 014952 175 PAVKINPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGA 254 (415)
Q Consensus 175 ~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~l~~l~~G~ 254 (415)
......+++.++++|||||||.||+|.+||.++......... ...+.+.++++++...|++|.+++. .++.++..|+
T Consensus 169 ~~~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~~~~~~~~~~~--~~~~~~~~~d~~l~~~p~~h~~~~~-~~~~~l~~G~ 245 (539)
T PRK07008 169 DWPRFDENQASSLCYTSGTTGNPKGALYSHRSTVLHAYGAAL--PDAMGLSARDAVLPVVPMFHVNAWG-LPYSAPLTGA 245 (539)
T ss_pred CcccCCcccceEEEECCCCCCCCcEEEEecHHHHHHHHHhhc--ccccCCCCCceEEecCchHHhhhHH-HHHHHHhcCc
Confidence 223456788999999999999999999999998653322111 1134577899999999999988876 3577889999
Q ss_pred EEEEcC-CCCHHHHHHHHHhcCceeeecchHHHHHHHcCCCCCCCCcccceeeeecCCCCCHHHHHHHHhhCCCCccccc
Q 014952 255 AILIMQ-KFDIVKLMELVQKYKVTVAPFVPPIVLAVAKSGDVDKYDMSSIRTVMSGAAPMGKELEDAVRAKLPHAKLGQG 333 (415)
Q Consensus 255 ~~v~~~-~~~~~~~~~~l~~~~~t~l~~~p~~l~~l~~~~~~~~~~l~~lr~v~~gG~~l~~~~~~~~~~~~~~~~~~~~ 333 (415)
++++.+ .+++..+++.++++++|++.++|.++..+++.......+++++|.++++|+++++++.+++.+.+ +.++++.
T Consensus 246 ~~~~~~~~~~~~~~~~~l~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~l~~~~~~G~~l~~~~~~~~~~~~-~~~l~~~ 324 (539)
T PRK07008 246 KLVLPGPDLDGKSLYELIEAERVTFSAGVPTVWLGLLNHMREAGLRFSTLRRTVIGGSACPPAMIRTFEDEY-GVEVIHA 324 (539)
T ss_pred eEEEecCCcCHHHHHHHHHHcCCEEEEechHHHHHHHhcccccCCCcccceEEEEcCCCCCHHHHHHHHHHh-CCceecc
Confidence 999874 57999999999999999999999999999987766667789999999999999999999999999 8999999
Q ss_pred cccccCCccccccccccCC------ccccCCCcccccccCCeEEEEeCCCCCCCCCC--CceeEEEecCccccccccCCc
Q 014952 334 YGMTEAGPVLSMCLAFAKE------PFEIKSGACGTVVRNAEMKIVDPDTGISLPRN--QAGEICIRGAQIMKGTYHIYA 405 (415)
Q Consensus 334 YG~tE~~~~~~~~~~~~~~------~~~~~~~~~G~p~~~~~v~i~d~~~~~~~~~g--~~Gel~v~~~~~~~gY~~~~~ 405 (415)
||+||++...+.+...... .......++|+|+|+++++|+|+ ++++++.+ +.|||+++|++++.||+++++
T Consensus 325 YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~p~pg~~~~i~d~-~~~~~~~~~~~~Gei~v~g~~~~~gy~~~~~ 403 (539)
T PRK07008 325 WGMTEMSPLGTLCKLKWKHSQLPLDEQRKLLEKQGRVIYGVDMKIVGD-DGRELPWDGKAFGDLQVRGPWVIDRYFRGDA 403 (539)
T ss_pred cccccccccceecccccccccCCchhhhhhcccCCccccceEEEEECC-CCCccCCCCCcceEEEEeCCccchhhcCChh
Confidence 9999999755443110000 01112467899999999999994 58888754 579999999999999999974
No 91
>PRK13388 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=1.4e-46 Score=370.69 Aligned_cols=361 Identities=20% Similarity=0.273 Sum_probs=289.2
Q ss_pred CCHHhHHHhhhccCCCCcEEEeCCCCCeeeHHHHHHHHHHHHHHHHHcCC-CCCCEEEEEcCCchhHHHHHHHHHHhCCe
Q 014952 25 LPLHTYCFENISQFADRPCIINGPTGDVYTYADVELTSRKVAAGLSKLGV-QKGDVIMLLLQNCPQFVFAFLGASYIGAT 103 (415)
Q Consensus 25 ~tl~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~~a~~L~~~g~-~~g~~V~i~~~~~~~~~~~~lA~~~~G~~ 103 (415)
.|+.+.|.+++ .|+++|+++. +..+||+||.++++++|..|.++|+ ++||+|+++++|+.+++++++||+++|++
T Consensus 3 ~~~~~~l~~~~--~p~~~Al~~~--~~~lTy~el~~~~~~la~~L~~~g~~~~~~~V~i~~~n~~~~v~~~lA~~~~Ga~ 78 (540)
T PRK13388 3 DTIAQLLRDRA--GDDTIAVRYG--DRTWTWREVLAEAAARAAALIALADPDRPLHVGVLLGNTPEMLFWLAAAALGGYV 78 (540)
T ss_pred hhHHHHHHhhc--cCCceEEEEC--CceeeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCcHHHHHHHHHHhCCCE
Confidence 47888888765 6999999986 7899999999999999999999999 79999999999999999999999999999
Q ss_pred EeecCCCCCHHHHHHHHHhcCceEEEEcccchHHHHhhhhhcCceEEEeCCCCCCccchhhhhhhcccCCCCcccCCCCC
Q 014952 104 STTANPFYTPPEIAKQAIASKAKIIITQAVYNDKVRDLSEHHGARIVTIDPPPENCLHFSELITQADENEIPAVKINPDD 183 (415)
Q Consensus 104 ~v~l~~~~~~~~~~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 183 (415)
++|++|.++.+++.++++++++++++++++....+.... ....+++.++.. .+.+++. ......+.....+++
T Consensus 79 ~v~l~p~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~~~-~~~~~~i~~~~~-----~~~~~~~-~~~~~~~~~~~~~~~ 151 (540)
T PRK13388 79 LVGLNTTRRGAALAADIRRADCQLLVTDAEHRPLLDGLD-LPGVRVLDVDTP-----AYAELVA-AAGALTPHREVDAMD 151 (540)
T ss_pred EEEecccCChHHHHHHHHhcCCCEEEEChhhhHHHHhhc-ccCceEEEccch-----hhhhhhc-cccCcCCCCCCCCCC
Confidence 999999999999999999999999999887766554431 123444444321 1223211 111112223356799
Q ss_pred eEEEecCCCCCCCCceeeechHHHHHHHhhhhcCCCCCccCCCCcEEEEccchHHHHhhHHHHHHHHHcCcEEEEcCCCC
Q 014952 184 VVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIMQKFD 263 (415)
Q Consensus 184 ~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~l~~l~~G~~~v~~~~~~ 263 (415)
+++|+|||||||.||+|.++|+++......... .+.+..+++++..+|++|..++...++.++..|+++++.+.++
T Consensus 152 ~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~----~~~~~~~d~~l~~~p~~~~~~~~~~~~~~l~~G~~~v~~~~~~ 227 (540)
T PRK13388 152 PFMLIFTSGTTGAPKAVRCSHGRLAFAGRALTE----RFGLTRDDVCYVSMPLFHSNAVMAGWAPAVASGAAVALPAKFS 227 (540)
T ss_pred eEEEEECCCCCCCCCEEEecHHHHHHHHHHHHH----HhCCCCCCEEEEeeCchhhcchHHHHHHHHHcCcEEEECCCCC
Confidence 999999999999999999999999887776665 4467889999999999999998765667899999999988889
Q ss_pred HHHHHHHHHhcCceeeecchHHHHHHHcCCCCCCCCcccceeeeecCCCCCHHHHHHHHhhCCCCccccccccccCCccc
Q 014952 264 IVKLMELVQKYKVTVAPFVPPIVLAVAKSGDVDKYDMSSIRTVMSGAAPMGKELEDAVRAKLPHAKLGQGYGMTEAGPVL 343 (415)
Q Consensus 264 ~~~~~~~l~~~~~t~l~~~p~~l~~l~~~~~~~~~~l~~lr~v~~gG~~l~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~ 343 (415)
+..+++.++++++|++..+|..+..++..+........+++.+ + |+++.++..+++.+.+ +.++++.||+||++.++
T Consensus 228 ~~~~~~~i~~~~vt~~~~~p~~l~~l~~~~~~~~~~~~~l~~~-~-G~~~~~~~~~~~~~~~-~~~l~~~YG~tE~~~~~ 304 (540)
T PRK13388 228 ASGFLDDVRRYGATYFNYVGKPLAYILATPERPDDADNPLRVA-F-GNEASPRDIAEFSRRF-GCQVEDGYGSSEGAVIV 304 (540)
T ss_pred HHHHHHHHHHhCCeEEEehHHHHHHHHhCCCCccccccceEEE-E-CCCCCHHHHHHHHHHh-CCceeccccccccccee
Confidence 9999999999999999999999998887654332333466643 3 5667888899999988 78999999999998655
Q ss_pred cccccccCCccccCCCcccccccCCeEE-----------EEeCCCCCCC-CCCCceeEEEe-cCccccccccCCcceeee
Q 014952 344 SMCLAFAKEPFEIKSGACGTVVRNAEMK-----------IVDPDTGISL-PRNQAGEICIR-GAQIMKGTYHIYAPFLLS 410 (415)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~G~p~~~~~v~-----------i~d~~~~~~~-~~g~~Gel~v~-~~~~~~gY~~~~~~~~~~ 410 (415)
... .....+++|+|++++++. ++| ++|+++ +.++.|||+++ |+.++.||+++|+.+...
T Consensus 305 ~~~-------~~~~~~~vG~p~~g~~i~~~~~~~~~~~~~~d-~~g~~~~~~~~~GEl~v~~g~~~~~gY~~~~~~t~~~ 376 (540)
T PRK13388 305 VRE-------PGTPPGSIGRGAPGVAIYNPETLTECAVARFD-AHGALLNADEAIGELVNTAGAGFFEGYYNNPEATAER 376 (540)
T ss_pred ecC-------CCCCCCCCCCCCCCcEEEcCCCCccccceecc-CccccccCCCcceEEEEecCCcccccccCChHHHHHH
Confidence 432 123467899999997652 444 335555 35679999998 999999999999988665
Q ss_pred e
Q 014952 411 I 411 (415)
Q Consensus 411 ~ 411 (415)
|
T Consensus 377 ~ 377 (540)
T PRK13388 377 M 377 (540)
T ss_pred h
Confidence 4
No 92
>PRK04813 D-alanine--poly(phosphoribitol) ligase subunit 1; Provisional
Probab=100.00 E-value=8.7e-47 Score=370.11 Aligned_cols=366 Identities=19% Similarity=0.246 Sum_probs=304.3
Q ss_pred CCHHhHHHhhhccCCCCcEEEeCCCCCeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHHhCCeE
Q 014952 25 LPLHTYCFENISQFADRPCIINGPTGDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGATS 104 (415)
Q Consensus 25 ~tl~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~ 104 (415)
+++.+.|.++++++|+++++.+. ++.+||+||.++++++|..|.++|+++|++|+++++|+.+++++++||+++|+++
T Consensus 2 ~~~~~~l~~~a~~~p~~~~~~~~--~~~~t~~~l~~~~~~~a~~l~~~g~~~~~~v~~~~~~~~~~~~~~~a~~~~G~~~ 79 (503)
T PRK04813 2 MDIIETIEEFAQTQPDFPAYDYL--GEKLTYGQLKEDSDALAAFIDSLKLPDKSPIIVFGHMSPEMLATFLGAVKAGHAY 79 (503)
T ss_pred chHHHHHHHHHHhCCCceEEEeC--CcEEeHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCEE
Confidence 57889999999999999999987 7899999999999999999999999999999999999999999999999999999
Q ss_pred eecCCCCCHHHHHHHHHhcCceEEEEcccchHHHHhhhhhcCceEEEeCCCCCCccchhhhhhhcccCCCCcccCCCCCe
Q 014952 105 TTANPFYTPPEIAKQAIASKAKIIITQAVYNDKVRDLSEHHGARIVTIDPPPENCLHFSELITQADENEIPAVKINPDDV 184 (415)
Q Consensus 105 v~l~~~~~~~~~~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 184 (415)
+|+++.++.+++..+++..++++++++.+.... ......+..+ .+.+... ............+++.
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~-------~~~~~~~-~~~~~~~~~~~~~~~~ 145 (503)
T PRK04813 80 IPVDVSSPAERIEMIIEVAKPSLIIATEELPLE------ILGIPVITLD-------ELKDIFA-TGNPYDFDHAVKGDDN 145 (503)
T ss_pred ecCCCCChHHHHHHHHHhcCCCEEEeccccccc------ccCCcEEehH-------Hhhhhhh-ccccccccccCCCCCc
Confidence 999999999999999999999999998765210 0112222211 1111100 0111111234567889
Q ss_pred EEEecCCCCCCCCceeeechHHHHHHHhhhhcCCCCCccCCCCcEEEEccchHHHHhhHHHHHHHHHcCcEEEEcCC---
Q 014952 185 VALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIMQK--- 261 (415)
Q Consensus 185 a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~l~~l~~G~~~v~~~~--- 261 (415)
++++|||||||.||+|.++|+++.....+... .+.+..+++++...|++|..+.. .++.++..|+++++.++
T Consensus 146 ~~i~~TSGTTG~PK~v~~t~~~~~~~~~~~~~----~~~~~~~~~~~~~~p~~~~~~~~-~~~~~l~~g~~~v~~~~~~~ 220 (503)
T PRK04813 146 YYIIFTSGTTGKPKGVQISHDNLVSFTNWMLE----DFALPEGPQFLNQAPYSFDLSVM-DLYPTLASGGTLVALPKDMT 220 (503)
T ss_pred EEEEECCCCCCCCcEEEeehHHHHHHHHHHHH----HcCCCcCceeeecCCcchhHhHH-HHHHHHhcCCEEEEcChhhh
Confidence 99999999999999999999999988777666 34578889999999999998886 47789999999998875
Q ss_pred CCHHHHHHHHHhcCceeeecchHHHHHHHcCCCCCCCCcccceeeeecCCCCCHHHHHHHHhhCCCCccccccccccCCc
Q 014952 262 FDIVKLMELVQKYKVTVAPFVPPIVLAVAKSGDVDKYDMSSIRTVMSGAAPMGKELEDAVRAKLPHAKLGQGYGMTEAGP 341 (415)
Q Consensus 262 ~~~~~~~~~l~~~~~t~l~~~p~~l~~l~~~~~~~~~~l~~lr~v~~gG~~l~~~~~~~~~~~~~~~~~~~~YG~tE~~~ 341 (415)
.++..+++.+++++++++..+|.++..+..........++++|.++++|+++++++.+++.+.++++.+++.||+||++.
T Consensus 221 ~~~~~~~~~~~~~~~t~~~~~p~~~~~~~~~~~~~~~~~~~l~~i~~~G~~l~~~~~~~~~~~~~~~~~~~~yG~tE~~~ 300 (503)
T PRK04813 221 ANFKQLFETLPQLPINVWVSTPSFADMCLLDPSFNEEHLPNLTHFLFCGEELPHKTAKKLLERFPSATIYNTYGPTEATV 300 (503)
T ss_pred cCHHHHHHHHHHcCCeEEEeChHHHHHHHHhhccCcccCCCceEEEEecCcCCHHHHHHHHHHCCCceEEeCcccchhee
Confidence 58899999999999999999999998876655545567899999999999999999999999998899999999999986
Q ss_pred cccccccccCCccccCCCcccccccCCeEEEEeCCCCCCCCCCCceeEEEecCccccccccCCcceeeeee
Q 014952 342 VLSMCLAFAKEPFEIKSGACGTVVRNAEMKIVDPDTGISLPRNQAGEICIRGAQIMKGTYHIYAPFLLSIV 412 (415)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~G~p~~~~~v~i~d~~~~~~~~~g~~Gel~v~~~~~~~gY~~~~~~~~~~~~ 412 (415)
.++...............++|+|.++++++|+| +++.+++.|+.|||+++|+.++.||+++++.+...|.
T Consensus 301 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~d-~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~ 370 (503)
T PRK04813 301 AVTSIEITDEMLDQYKRLPIGYAKPDSPLLIID-EEGTKLPDGEQGEIVISGPSVSKGYLNNPEKTAEAFF 370 (503)
T ss_pred EEEEEEecccccccCCCCcccccCCCCEEEEEC-CCCCCCCCCCceEEEEeccccccccCCChhHhHHhhc
Confidence 544332211122234556799999999999999 6689999999999999999999999999999888764
No 93
>PRK05691 peptide synthase; Validated
Probab=100.00 E-value=2.5e-47 Score=442.93 Aligned_cols=364 Identities=23% Similarity=0.336 Sum_probs=309.1
Q ss_pred CCCCHHhHHHhhhccCCCCcEEEeCCCCCeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHHhCC
Q 014952 23 NHLPLHTYCFENISQFADRPCIINGPTGDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGA 102 (415)
Q Consensus 23 ~~~tl~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~ 102 (415)
...++.+.|.++++++|+++|+++. ++.+||+||.++++++|+.|+++|+++|++|+++++++.+++++++|++++|+
T Consensus 1129 ~~~~l~~~~~~~a~~~p~~~Al~~~--~~~lTY~eL~~~~~~lA~~L~~~gv~~g~~V~i~~~~s~~~iv~~lailkaG~ 1206 (4334)
T PRK05691 1129 AQAWLPELLNEQARQTPERIALVWD--GGSLDYAELHAQANRLAHYLRDKGVGPDVCVAIAAERSPQLLVGLLAILKAGG 1206 (4334)
T ss_pred ccCCHHHHHHHHHHhCCCCeEEEEC--CceEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHHHHhCC
Confidence 3578999999999999999999987 78999999999999999999999999999999999999999999999999999
Q ss_pred eEeecCCCCCHHHHHHHHHhcCceEEEEcccchHHHHhhhhhcCceEEEeCCCCCCccchhhhhhhcccCCCCcccCCCC
Q 014952 103 TSTTANPFYTPPEIAKQAIASKAKIIITQAVYNDKVRDLSEHHGARIVTIDPPPENCLHFSELITQADENEIPAVKINPD 182 (415)
Q Consensus 103 ~~v~l~~~~~~~~~~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 182 (415)
+++|++|.++.+++.++++++++++++++......+... .....+.++... ........+.....++
T Consensus 1207 ~~vpld~~~p~~rl~~il~~~~~~~vi~~~~~~~~~~~~---~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~ 1273 (4334)
T PRK05691 1207 AYVPLDPDYPAERLAYMLADSGVELLLTQSHLLERLPQA---EGVSAIALDSLH----------LDSWPSQAPGLHLHGD 1273 (4334)
T ss_pred EEEecCcCChHHHHHHHHHhcCCCEEEecchhhhhcccc---cCceEEeecccc----------ccccCCCCCCCCCCCC
Confidence 999999999999999999999999999988765443221 112233332110 0000111222345678
Q ss_pred CeEEEecCCCCCCCCceeeechHHHHHHHhhhhcCCCCCccCCCCcEEEEccchHHHHhhHHHHHHHHHcCcEEEEcCC-
Q 014952 183 DVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIMQK- 261 (415)
Q Consensus 183 ~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~l~~l~~G~~~v~~~~- 261 (415)
++++|+|||||||.||||+++|+++.+.+.+... .+.++++++++...|++|..+.. .++.++..|+++++.+.
T Consensus 1274 ~~a~ii~TSGSTG~PKgV~~~h~~l~~~~~~~~~----~~~~~~~d~~l~~~~~~fd~s~~-~~~~~L~~G~~l~i~~~~ 1348 (4334)
T PRK05691 1274 NLAYVIYTSGSTGQPKGVGNTHAALAERLQWMQA----TYALDDSDVLMQKAPISFDVSVW-ECFWPLITGCRLVLAGPG 1348 (4334)
T ss_pred CeEEEEEcCCCCCCCceeEeecHHHHHHHHHHHH----hcCCCCCCEEEEeCCccHHHHHH-HHHHHHhCCCEEEEcCcc
Confidence 9999999999999999999999999998887766 45688999999999999998887 58899999999999853
Q ss_pred --CCHHHHHHHHHhcCceeeecchHHHHHHHcCCCCCCCCcccceeeeecCCCCCHHHHHHHHhhCCCCccccccccccC
Q 014952 262 --FDIVKLMELVQKYKVTVAPFVPPIVLAVAKSGDVDKYDMSSIRTVMSGAAPMGKELEDAVRAKLPHAKLGQGYGMTEA 339 (415)
Q Consensus 262 --~~~~~~~~~l~~~~~t~l~~~p~~l~~l~~~~~~~~~~l~~lr~v~~gG~~l~~~~~~~~~~~~~~~~~~~~YG~tE~ 339 (415)
.++..+.+.++++++|++.++|+++..+.+... ...+++||.+++||+++++++.+++.+.+|+.++++.||+||+
T Consensus 1349 ~~~~~~~l~~~i~~~~vt~~~~~Ps~l~~l~~~~~--~~~~~~lr~~~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~ 1426 (4334)
T PRK05691 1349 EHRDPQRIAELVQQYGVTTLHFVPPLLQLFIDEPL--AAACTSLRRLFSGGEALPAELRNRVLQRLPQVQLHNRYGPTET 1426 (4334)
T ss_pred ccCCHHHHHHHHHHcCCeEEECcHHHHHHHHhCcc--cccCCcccEEEEeecCCCHHHHHHHHHhCCCcEEEeCCCcChh
Confidence 689999999999999999999999999987543 3357899999999999999999999999988999999999999
Q ss_pred CccccccccccCCccccCCCcccccccCCeEEEEeCCCCCCCCCCCceeEEEecCccccccccCCcceeeeee
Q 014952 340 GPVLSMCLAFAKEPFEIKSGACGTVVRNAEMKIVDPDTGISLPRNQAGEICIRGAQIMKGTYHIYAPFLLSIV 412 (415)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~G~p~~~~~v~i~d~~~~~~~~~g~~Gel~v~~~~~~~gY~~~~~~~~~~~~ 412 (415)
+..++.... ........++|+|+++++++|+| +++++++.|+.|||+|+|+++++||+++|+.+..+|+
T Consensus 1427 ~~~~~~~~~---~~~~~~~~~iG~p~~~~~~~i~d-~~~~~vp~G~~GEL~i~G~~v~~GYl~~p~~t~~~f~ 1495 (4334)
T PRK05691 1427 AINVTHWQC---QAEDGERSPIGRPLGNVLCRVLD-AELNLLPPGVAGELCIGGAGLARGYLGRPALTAERFV 1495 (4334)
T ss_pred eeeeeeeec---ccccCCCCcccceeCCCEEEEEC-CCCCCCCCCCceEEEecCcccchhhcCCccccHhhCC
Confidence 864443211 11233456899999999999999 5589999999999999999999999999999999986
No 94
>PRK09088 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.2e-46 Score=367.48 Aligned_cols=353 Identities=22% Similarity=0.338 Sum_probs=290.6
Q ss_pred HhhhccCCCCcEEEeCCCCCeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHHhCCeEeecCCCC
Q 014952 32 FENISQFADRPCIINGPTGDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGATSTTANPFY 111 (415)
Q Consensus 32 ~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~ 111 (415)
..+++.+|+++++.+..++..+||.||.++++++|+.|.+.|+++||+|+++++|+.++++++|||+++|++++|+++..
T Consensus 2 ~~~a~~~p~~~a~~~~~~~~~~ty~~l~~~v~~~a~~l~~~g~~~~~~v~i~~~~~~~~~~~~la~~~~G~~~v~~~~~~ 81 (488)
T PRK09088 2 AFHARLQPQRLAAVDLALGRRWTYAELDALVGRLAAVLRRRGCVDGERLAVLARNSVWLVALHFACARVGAIYVPLNWRL 81 (488)
T ss_pred chhhhhCCCceEEEecCCCcEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHcCeEEEeeCccC
Confidence 35677899999998754578999999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHhcCceEEEEcccchHHHHhhhhhcCceEEEeCCCCCCccchhhhhhhcc-cCCCCcccCCCCCeEEEecC
Q 014952 112 TPPEIAKQAIASKAKIIITQAVYNDKVRDLSEHHGARIVTIDPPPENCLHFSELITQAD-ENEIPAVKINPDDVVALPYS 190 (415)
Q Consensus 112 ~~~~~~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~a~i~~T 190 (415)
+.+++..++++++++++++++..... ....+ .++++..... ...........+++++++||
T Consensus 82 ~~~~~~~~~~~~~~~~ii~~~~~~~~--------~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~T 143 (488)
T PRK09088 82 SASELDALLQDAEPRLLLGDDAVAAG--------RTDVE----------DLAAFIASADALEPADTPSIPPERVSLILFT 143 (488)
T ss_pred CHHHHHHHHHhCCCCEEEEcchhhcc--------ccccc----------chhhhhhhccccccccCCCCCCCCceEEEeC
Confidence 99999999999999999997653321 01111 1112111100 01111223456889999999
Q ss_pred CCCCCCCceeeechHHHHHHHhhhhcCCCCCccCCCCcEEEEccchHHHHhhHHHHHHHHHcCcEEEEcCCCCHHHHHHH
Q 014952 191 SGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIMQKFDIVKLMEL 270 (415)
Q Consensus 191 SGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~l~~l~~G~~~v~~~~~~~~~~~~~ 270 (415)
|||||.||++.++|+++......... .......+++++.+|++|.+++...+..++..|+++++.+.+++..++..
T Consensus 144 SGTTG~PK~v~~s~~~l~~~~~~~~~----~~~~~~~d~~l~~~pl~~~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~ 219 (488)
T PRK09088 144 SGTSGQPKGVMLSERNLQQTAHNFGV----LGRVDAHSSFLCDAPMFHIIGLITSVRPVLAVGGSILVSNGFEPKRTLGR 219 (488)
T ss_pred CCCCCCCcEEEEehHHHHHHHHHHHH----hhCCCCCcEEEEecchHHHHHHHHHHHHHHhcCCEEEEcCCCCHHHHHHH
Confidence 99999999999999999877766655 33467889999999999999998777888999999999888899999888
Q ss_pred HH--hcCceeeecchHHHHHHHcCCCCCCCCcccceeeeecCCCCCHHHHHHHHhhCCCCccccccccccCCcccccccc
Q 014952 271 VQ--KYKVTVAPFVPPIVLAVAKSGDVDKYDMSSIRTVMSGAAPMGKELEDAVRAKLPHAKLGQGYGMTEAGPVLSMCLA 348 (415)
Q Consensus 271 l~--~~~~t~l~~~p~~l~~l~~~~~~~~~~l~~lr~v~~gG~~l~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~ 348 (415)
+. ++++|+++++|.++..+.+........++++|.+++||++++.+..+++.+. ++++++.||+||++++.....
T Consensus 220 ~~~~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~l~~~~~gG~~~~~~~~~~~~~~--g~~v~~~YG~TE~~~~~~~~~- 296 (488)
T PRK09088 220 LGDPALGITHYFCVPQMAQAFRAQPGFDAAALRHLTALFTGGAPHAAEDILGWLDD--GIPMVDGFGMSEAGTVFGMSV- 296 (488)
T ss_pred HHhhccCCcEEeeHHHHHHHHHhCcCcCccccccceEEEecCCCCCHHHHHHHHHh--CCceeeeecccccccccccCC-
Confidence 86 4899999999999999987765555668899999999999999888888765 789999999999987543321
Q ss_pred ccCCccccCCCcccccccCCeEEEEeCCCCCCCCCCCceeEEEecCccccccccCCcceeeee
Q 014952 349 FAKEPFEIKSGACGTVVRNAEMKIVDPDTGISLPRNQAGEICIRGAQIMKGTYHIYAPFLLSI 411 (415)
Q Consensus 349 ~~~~~~~~~~~~~G~p~~~~~v~i~d~~~~~~~~~g~~Gel~v~~~~~~~gY~~~~~~~~~~~ 411 (415)
........++++|+|+|+++++|+| +++++++.|+.|||+|+||+++.||+++++.+...|
T Consensus 297 -~~~~~~~~~~~vG~~~~~~~~~i~d-~~~~~~~~g~~Gel~v~~~~~~~gY~~~~~~~~~~~ 357 (488)
T PRK09088 297 -DCDVIRAKAGAAGIPTPTVQTRVVD-DQGNDCPAGVPGELLLRGPNLSPGYWRRPQATARAF 357 (488)
T ss_pred -CcccccccCCccccCCCCcEEEEEC-CCCCCCcCCCceEEEEECCccchhhcCChhhhhhhh
Confidence 1111233567899999999999999 558999999999999999999999999999887655
No 95
>PRK05620 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=9.6e-46 Score=367.91 Aligned_cols=377 Identities=19% Similarity=0.287 Sum_probs=301.6
Q ss_pred CCCHHhHHHhhhccCCCCcEEEeCC-CCCeeeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEcCCchhHHHHHHHHHHhC
Q 014952 24 HLPLHTYCFENISQFADRPCIINGP-TGDVYTYADVELTSRKVAAGLSK-LGVQKGDVIMLLLQNCPQFVFAFLGASYIG 101 (415)
Q Consensus 24 ~~tl~~~l~~~a~~~p~~~a~~~~~-~~~~~Ty~el~~~~~~~a~~L~~-~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G 101 (415)
.+|+.++|.+++..+|++.++++.+ ..+.+||+||.++++++|++|.+ .|+++||+|+++++|+.+++++++||+++|
T Consensus 9 ~~~~~~~l~~~a~~~~~~~a~~~~~~~~~~~Ty~el~~~~~~la~~L~~~~g~~~gd~V~~~~~n~~e~~~~~lA~~~~G 88 (576)
T PRK05620 9 PLSLTRILEYGSTVHGDTTVTTWGGAEQEQTTFAAIGARAAALAHALHDELGITGDQRVGSMMYNCAEHLEVLFAVACMG 88 (576)
T ss_pred CCcHHHHHHHHHHhCCCceEEEEcCCceEEEeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEeCCCHHHHHHHHHHHhcC
Confidence 4799999999999999999998753 24799999999999999999986 799999999999999999999999999999
Q ss_pred CeEeecCCCCCHHHHHHHHHhcCceEEEEcccchHHHHhhhhhcC-ce-EEEeCCC-----------CCCccchhhhhhh
Q 014952 102 ATSTTANPFYTPPEIAKQAIASKAKIIITQAVYNDKVRDLSEHHG-AR-IVTIDPP-----------PENCLHFSELITQ 168 (415)
Q Consensus 102 ~~~v~l~~~~~~~~~~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~-~~-~i~~~~~-----------~~~~~~~~~l~~~ 168 (415)
+++++++|..+.+++.++++.+++.++++++...+.+........ .+ ++.++.. .....++++++ +
T Consensus 89 ~~~v~l~~~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~ 167 (576)
T PRK05620 89 AVFNPLNKQLMNDQIVHIINHAEDEVIVADPRLAEQLGEILKECPCVRAVVFIGPSDADSAAAHMPEGIKVYSYEALL-D 167 (576)
T ss_pred CEEeecccccCHHHHHHHHhccCCcEEEEChhhHHHHHHHHhhCccccEEEEecCcccccchhccccccccccHHHHh-h
Confidence 999999999999999999999999999999887776655543322 22 3333321 11233466663 2
Q ss_pred cccCCCCcccCCCCCeEEEecCCCCCCCCceeeechHHHHHHHhhhhcCCCCCccCCCCcEEEEccchHHHHhhHHHHHH
Q 014952 169 ADENEIPAVKINPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLC 248 (415)
Q Consensus 169 ~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~l~ 248 (415)
......+.....+++.++++|||||||.||+|.++|.++.......... ..+.+..++++++.+|++|.+++. ..+.
T Consensus 168 ~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~l~~~~~~~~~~--~~~~~~~~~~~l~~~pl~h~~g~~-~~~~ 244 (576)
T PRK05620 168 GRSTVYDWPELDETTAAAICYSTGTTGAPKGVVYSHRSLYLQSLSLRTT--DSLAVTHGESFLCCVPIYHVLSWG-VPLA 244 (576)
T ss_pred cCCCcCCCCCCCccceeEEEECCCCCCCCceEEEEcHHHHHHHHHhhhh--hhcCCCCCCeEEEeCChHHhhhhH-HHHH
Confidence 2222222334567899999999999999999999999986544332211 134577899999999999999987 4688
Q ss_pred HHHcCcEEEEcC-CCCHHHHHHHHHhcCceeeecchHHHHHHHcCCCCCCCCcccceeeeecCCCCCHHHHHHHHhhCCC
Q 014952 249 ALRVGAAILIMQ-KFDIVKLMELVQKYKVTVAPFVPPIVLAVAKSGDVDKYDMSSIRTVMSGAAPMGKELEDAVRAKLPH 327 (415)
Q Consensus 249 ~l~~G~~~v~~~-~~~~~~~~~~l~~~~~t~l~~~p~~l~~l~~~~~~~~~~l~~lr~v~~gG~~l~~~~~~~~~~~~~~ 327 (415)
++..|+++++.+ .+++..+++.++++++++++++|.++..++...........++|.+++||++++.++.+++.+.+ +
T Consensus 245 ~l~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~l~~~~~gG~~~~~~~~~~~~~~~-~ 323 (576)
T PRK05620 245 AFMSGTPLVFPGPDLSAPTLAKIIATAMPRVAHGVPTLWIQLMVHYLKNPPERMSLQEIYVGGSAVPPILIKAWEERY-G 323 (576)
T ss_pred HHhcCceEEecCCCCCHHHHHHHHHHhcCceeeecCHHHHHHHHHhhccCcccCceeEEEEcCCCCCHHHHHHHHHHh-C
Confidence 899999998875 47999999999999999999999999888765433333456899999999999999999999998 7
Q ss_pred CccccccccccCCccccccccccCC---ccccCCCcccccccCCeEEEEeCCCCCCCC--CCCceeEEEecCcccccccc
Q 014952 328 AKLGQGYGMTEAGPVLSMCLAFAKE---PFEIKSGACGTVVRNAEMKIVDPDTGISLP--RNQAGEICIRGAQIMKGTYH 402 (415)
Q Consensus 328 ~~~~~~YG~tE~~~~~~~~~~~~~~---~~~~~~~~~G~p~~~~~v~i~d~~~~~~~~--~g~~Gel~v~~~~~~~gY~~ 402 (415)
+++++.||+||++............ .......++|++.++++++|+| + ++.++ .++.|||+++|++++.|||+
T Consensus 324 ~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~~-~-g~~~~~~~~~~Gel~v~g~~~~~gY~~ 401 (576)
T PRK05620 324 VDVVHVWGMTETSPVGTVARPPSGVSGEARWAYRVSQGRFPASLEYRIVN-D-GQVMESTDRNEGEIQVRGNWVTASYYH 401 (576)
T ss_pred CceeeeccccccccceeeeccCCccccccccccccccCCcCCceeEEEec-C-CccccCCCCCceEEEEEcCcccccccC
Confidence 8999999999998765443210000 0011234789999999999999 4 66664 47899999999999999999
Q ss_pred CCcce
Q 014952 403 IYAPF 407 (415)
Q Consensus 403 ~~~~~ 407 (415)
+|+.+
T Consensus 402 ~~~~t 406 (576)
T PRK05620 402 SPTEE 406 (576)
T ss_pred Ccccc
Confidence 99887
No 96
>PRK06018 putative acyl-CoA synthetase; Provisional
Probab=100.00 E-value=1.3e-45 Score=364.48 Aligned_cols=373 Identities=24% Similarity=0.344 Sum_probs=297.3
Q ss_pred CCCHHhHHHhhhccCCCCcEEEeCCC--CCeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHHhC
Q 014952 24 HLPLHTYCFENISQFADRPCIINGPT--GDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIG 101 (415)
Q Consensus 24 ~~tl~~~l~~~a~~~p~~~a~~~~~~--~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G 101 (415)
.+|+.+++.++++++|++++++...+ .+++||+||.++++++|++|.++|+++||+|+++++|+.+++++++||+++|
T Consensus 9 ~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~Ty~el~~~v~~la~~L~~~g~~~gd~v~i~~~~~~~~~~~~la~~~~G 88 (542)
T PRK06018 9 PLLCHRIIDHAARIHGNREVVTRSVEGPIVRTTYAQIHDRALKVSQALDRDGIKLGDRVATIAWNTWRHLEAWYGIMGIG 88 (542)
T ss_pred CCCHHHHHHHHHHhCCCceEEEeeccCCceEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHHHhcC
Confidence 38999999999999999999985322 3789999999999999999999999999999999999999999999999999
Q ss_pred CeEeecCCCCCHHHHHHHHHhcCceEEEEcccchHHHHhhhhhcC-c-eEEEeCCCC-------CCccchhhhhhhcccC
Q 014952 102 ATSTTANPFYTPPEIAKQAIASKAKIIITQAVYNDKVRDLSEHHG-A-RIVTIDPPP-------ENCLHFSELITQADEN 172 (415)
Q Consensus 102 ~~~v~l~~~~~~~~~~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~-~-~~i~~~~~~-------~~~~~~~~l~~~~~~~ 172 (415)
++++|+++.++.+++..+++.++++.++++.+..+.+.+...... . .++.+.+.. .....++++..... .
T Consensus 89 ~~~v~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 167 (542)
T PRK06018 89 AICHTVNPRLFPEQIAWIINHAEDRVVITDLTFVPILEKIADKLPSVERYVVLTDAAHMPQTTLKNAVAYEEWIAEAD-G 167 (542)
T ss_pred eEeeccccccCHHHHHHHHhccCCCEEEEccccHHHHHHHHhhCCCccEEEEecccccccccCccccccHHHHhccCC-c
Confidence 999999999999999999999999999999887777665543222 2 233332211 12223444422221 1
Q ss_pred CCCcccCCCCCeEEEecCCCCCCCCceeeechHHHH-HHH-hhhhcCCCCCccCCCCcEEEEccchHHHHhhHHHHHHHH
Q 014952 173 EIPAVKINPDDVVALPYSSGTTGLPKGVMLTHKGLV-TSV-AQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCAL 250 (415)
Q Consensus 173 ~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~-~~~-~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~l~~l 250 (415)
.........++.++|+|||||||.||+|.++|++.+ ... ..... .+.+..+++++...|++|..++.. .+.++
T Consensus 168 ~~~~~~~~~~~~~~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~----~~~~~~~d~~~~~~p~~h~~~~~~-~~~~~ 242 (542)
T PRK06018 168 DFAWKTFDENTAAGMCYTSGTTGDPKGVLYSHRSNVLHALMANNGD----ALGTSAADTMLPVVPLFHANSWGI-AFSAP 242 (542)
T ss_pred ccCcccCCccceeeEEecCCCCCCCcEEEEechhHHHHHHHHhhhh----hcCCCCCCEEEEecCHHHHhhhHH-HHhhh
Confidence 222234566789999999999999999999999743 222 22222 345788999999999999988874 56788
Q ss_pred HcCcEEEEcC-CCCHHHHHHHHHhcCceeeecchHHHHHHHcCCCCCCCCcccceeeeecCCCCCHHHHHHHHhhCCCCc
Q 014952 251 RVGAAILIMQ-KFDIVKLMELVQKYKVTVAPFVPPIVLAVAKSGDVDKYDMSSIRTVMSGAAPMGKELEDAVRAKLPHAK 329 (415)
Q Consensus 251 ~~G~~~v~~~-~~~~~~~~~~l~~~~~t~l~~~p~~l~~l~~~~~~~~~~l~~lr~v~~gG~~l~~~~~~~~~~~~~~~~ 329 (415)
..|+++++.. .+++..+++.++++++|++.++|+++..+.+.......+++++|.+++||+++++++.+++++ + +.+
T Consensus 243 ~~g~~~v~~~~~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~lr~~~~~G~~l~~~~~~~~~~-~-~~~ 320 (542)
T PRK06018 243 SMGTKLVMPGAKLDGASVYELLDTEKVTFTAGVPTVWLMLLQYMEKEGLKLPHLKMVVCGGSAMPRSMIKAFED-M-GVE 320 (542)
T ss_pred hcCceEEccCcCCCHHHHHHHHHhcCCceeecCcHHHHHHHhcccccCCCcccceEEEEcCCCCCHHHHHHHHH-h-CCC
Confidence 9999998875 578899999999999999999999999998876655667899999999999999999999999 7 899
Q ss_pred cccccccccCCccccccccccCCc------cccCCCcccccccCCeEEEEeCCCCCCCCCC--CceeEEEecCccccccc
Q 014952 330 LGQGYGMTEAGPVLSMCLAFAKEP------FEIKSGACGTVVRNAEMKIVDPDTGISLPRN--QAGEICIRGAQIMKGTY 401 (415)
Q Consensus 330 ~~~~YG~tE~~~~~~~~~~~~~~~------~~~~~~~~G~p~~~~~v~i~d~~~~~~~~~g--~~Gel~v~~~~~~~gY~ 401 (415)
+++.||+||++.+.+.+....... ......++|+|.++++++|+|+ ++++++.+ +.|||+++|++++.|||
T Consensus 321 ~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~g~~i~v~d~-~~~~~~~~~~~~Gel~i~g~~~~~gy~ 399 (542)
T PRK06018 321 VRHAWGMTEMSPLGTLAALKPPFSKLPGDARLDVLQKQGYPPFGVEMKITDD-AGKELPWDGKTFGRLKVRGPAVAAAYY 399 (542)
T ss_pred eEeeecccccCcccccccCccccccCCchhhhhccccCCCCCCCcEEEEECC-CCCCCCCCCCceeEEEEecCCcchhhh
Confidence 999999999997655431111000 0112467899999999999994 58877753 68999999999999999
Q ss_pred cCCc
Q 014952 402 HIYA 405 (415)
Q Consensus 402 ~~~~ 405 (415)
++..
T Consensus 400 ~~~~ 403 (542)
T PRK06018 400 RVDG 403 (542)
T ss_pred cCcc
Confidence 8543
No 97
>PRK13390 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=3.6e-46 Score=365.31 Aligned_cols=365 Identities=22% Similarity=0.311 Sum_probs=283.3
Q ss_pred hhhccCCCCcEEEeCCCCCeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHHhCCeEeecCCCCC
Q 014952 33 ENISQFADRPCIINGPTGDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGATSTTANPFYT 112 (415)
Q Consensus 33 ~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~ 112 (415)
.+++++|+++|+++.+++..+||+||.++++++|+.|.++|+++||+|+++++|++++++++|||+++|++++|+++.++
T Consensus 5 ~~a~~~p~~~a~~~~~~~~~lTy~el~~~~~~la~~L~~~gv~~gd~V~i~~~n~~~~~~~~la~~~~Ga~~~~l~~~~~ 84 (501)
T PRK13390 5 THAQIAPDRPAVIVAETGEQVSYRQLDDDSAALARVLYDAGLRTGDVVALLSDNSPEALVVLWAALRSGLYITAINHHLT 84 (501)
T ss_pred hhhhhCCCCcEEEecCCCeEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHHHHhCCEEeccccCCC
Confidence 46778999999998655789999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCceEEEEcccchHHHHhhhhhcCceEEEeCCCCCCccchhhhhhhcccCCCCcccCCCCCeEEEecCCC
Q 014952 113 PPEIAKQAIASKAKIIITQAVYNDKVRDLSEHHGARIVTIDPPPENCLHFSELITQADENEIPAVKINPDDVVALPYSSG 192 (415)
Q Consensus 113 ~~~~~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~i~~TSG 192 (415)
.+++.+++.+++++.++++....+.......... ..+.+.........+++.... .. + .....++.++|+||||
T Consensus 85 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~---~-~~~~~~~~a~i~~TSG 158 (501)
T PRK13390 85 APEADYIVGDSGARVLVASAALDGLAAKVGADLP-LRLSFGGEIDGFGSFEAALAG-AG---P-RLTEQPCGAVMLYSSG 158 (501)
T ss_pred HHHHHHHHHhcCCcEEEEcchhhhHHHHhhhccc-eEEEecCcccccccHHHHhcc-cC---C-CCCCCcccEEEEeCCC
Confidence 9999999999999999998765443332211111 122222222222233332111 10 0 1112235799999999
Q ss_pred CCCCCceeee--chHHHHHHHhhhhcCCCCCccCCCCcEEEEccchHHHHhhHHHHHHHHHcCcEEEEcCCCCHHHHHHH
Q 014952 193 TTGLPKGVML--THKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIMQKFDIVKLMEL 270 (415)
Q Consensus 193 tTG~pK~v~~--t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~l~~l~~G~~~v~~~~~~~~~~~~~ 270 (415)
|||.||+|.+ +|.++..............+.+..+++++..+|++|..++.. ....+..|+++++.+.+++..+++.
T Consensus 159 TTG~PKgV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~h~~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~~ 237 (501)
T PRK13390 159 TTGFPKGIQPDLPGRDVDAPGDPIVAIARAFYDISESDIYYSSAPIYHAAPLRW-CSMVHALGGTVVLAKRFDAQATLGH 237 (501)
T ss_pred CCCCCCEEEeeccccccccchhhhHhhHHHHhCCCCCCeEEecccchhhhHHHH-HHHHHhcCceEEEcCCcCHHHHHHH
Confidence 9999999995 455443321111000001335678899999999999998764 3445678999999888999999999
Q ss_pred HHhcCceeeecchHHHHHHHcCCC--CCCCCcccceeeeecCCCCCHHHHHHHHhhCCCCccccccccccCCcccccccc
Q 014952 271 VQKYKVTVAPFVPPIVLAVAKSGD--VDKYDMSSIRTVMSGAAPMGKELEDAVRAKLPHAKLGQGYGMTEAGPVLSMCLA 348 (415)
Q Consensus 271 l~~~~~t~l~~~p~~l~~l~~~~~--~~~~~l~~lr~v~~gG~~l~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~ 348 (415)
++++++|++.++|+++..+.+... ....+++++|.++.||++++.++.+.+.+.+ +..+++.||+||++++.....
T Consensus 238 i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~l~~v~~~g~~~~~~~~~~~~~~~-~~~~~~~YG~tE~~~~~~~~~- 315 (501)
T PRK13390 238 VERYRITVTQMVPTMFVRLLKLDADVRTRYDVSSLRAVIHAAAPCPVDVKHAMIDWL-GPIVYEYYSSTEAHGMTFIDS- 315 (501)
T ss_pred HHHcCCeEEEecHHHHHHHHhccchhcccCChhhhheEEEcCCCCCHHHHHHHHHhc-CCceeeeecccccCceEEecc-
Confidence 999999999999999999887542 2345678999999999999999999999988 788999999999986443221
Q ss_pred ccCCccccCCCcccccccCCeEEEEeCCCCCCCCCCCceeEEEecCccccccccCCcceeeee
Q 014952 349 FAKEPFEIKSGACGTVVRNAEMKIVDPDTGISLPRNQAGEICIRGAQIMKGTYHIYAPFLLSI 411 (415)
Q Consensus 349 ~~~~~~~~~~~~~G~p~~~~~v~i~d~~~~~~~~~g~~Gel~v~~~~~~~gY~~~~~~~~~~~ 411 (415)
.......+++|+|+++ .++|+| +++++++.|+.|||+++|++++.||+++|+.+...|
T Consensus 316 ---~~~~~~~~~~G~~~~g-~~~i~d-~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~t~~~~ 373 (501)
T PRK13390 316 ---PDWLAHPGSVGRSVLG-DLHICD-DDGNELPAGRIGTVYFERDRLPFRYLNDPEKTAAAQ 373 (501)
T ss_pred ---hhhccCCCCcCCcccc-eEEEEC-CCCCCCCCCCceEEEEecCCccccccCChhhhHHhh
Confidence 1122346789999999 799999 668999999999999999999999999999887654
No 98
>PLN02479 acetate-CoA ligase
Probab=100.00 E-value=2.4e-45 Score=364.22 Aligned_cols=380 Identities=20% Similarity=0.278 Sum_probs=293.8
Q ss_pred CCCCHHhHHHhhhccCCCCcEEEeCCCCCeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHHhCC
Q 014952 23 NHLPLHTYCFENISQFADRPCIINGPTGDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGA 102 (415)
Q Consensus 23 ~~~tl~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~ 102 (415)
..+|+...+...++.+|+++|+++. +..+||+||.++++++|+.|.+.|+++||+|+++++|+.+++++++||+++|+
T Consensus 18 ~~~~~~~~~~~~~~~~p~~~a~~~~--~~~~ty~eL~~~~~~lA~~L~~~g~~~gd~V~i~~~n~~~~~~~~la~~~~G~ 95 (567)
T PLN02479 18 TALTPLWFLERAAVVHPTRKSVVHG--SVRYTWAQTYQRCRRLASALAKRSIGPGSTVAVIAPNIPAMYEAHFGVPMAGA 95 (567)
T ss_pred cccCHHHHHHHHHhhCCCceEEEEC--CceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHHHHHHHHHhCCc
Confidence 3578899999999999999999986 68999999999999999999999999999999999999999999999999999
Q ss_pred eEeecCCCCCHHHHHHHHHhcCceEEEEcccchHHHHhhhhh---------cCceEEEeCCCC-----------CCccch
Q 014952 103 TSTTANPFYTPPEIAKQAIASKAKIIITQAVYNDKVRDLSEH---------HGARIVTIDPPP-----------ENCLHF 162 (415)
Q Consensus 103 ~~v~l~~~~~~~~~~~~l~~~~~~~vl~~~~~~~~~~~~~~~---------~~~~~i~~~~~~-----------~~~~~~ 162 (415)
+++|+++.++.+++.+++++++++++++++...+........ ....++.++... .+...+
T Consensus 96 v~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (567)
T PLN02479 96 VVNCVNIRLNAPTIAFLLEHSKSEVVMVDQEFFTLAEEALKILAEKKKSSFKPPLLIVIGDPTCDPKSLQYALGKGAIEY 175 (567)
T ss_pred EEEEeccccCHHHHHHHHhhcCceEEEEchhhhhHHHHHHHHHhhcccccCCCceEEEecCCcCCccccccccccCcccH
Confidence 999999999999999999999999999998766554433221 111233332211 122334
Q ss_pred hhhhhhcccCCCCcccCCCCCeEEEecCCCCCCCCceeeechHHHHHHHhhhhcCCCCCccCCCCcEEEEccchHHHHhh
Q 014952 163 SELITQADENEIPAVKINPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSL 242 (415)
Q Consensus 163 ~~l~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~ 242 (415)
++++...............++.++++|||||||.||+|.++|+++......... .+.+..+++++..+|++|..++
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~i~yTSGTTG~PKgV~~sh~~~~~~~~~~~~----~~~~~~~~~~~~~~p~~h~~~~ 251 (567)
T PLN02479 176 EKFLETGDPEFAWKPPADEWQSIALGYTSGTTASPKGVVLHHRGAYLMALSNAL----IWGMNEGAVYLWTLPMFHCNGW 251 (567)
T ss_pred HHHHhccccccccCCCCCcccceEEEECCCCCCCCcEEEeccHHHHHHHHHHHh----hcCCCCCCEEEEecchhhhhhH
Confidence 444222111111111223346778999999999999999999998765544433 3356788999999999999997
Q ss_pred HHHHHHHHHcCcEEEEcCCCCHHHHHHHHHhcCceeeecchHHHHHHHcCCCCCC-CCcccceeeeecCCCCCHHHHHHH
Q 014952 243 NSVLLCALRVGAAILIMQKFDIVKLMELVQKYKVTVAPFVPPIVLAVAKSGDVDK-YDMSSIRTVMSGAAPMGKELEDAV 321 (415)
Q Consensus 243 ~~~~l~~l~~G~~~v~~~~~~~~~~~~~l~~~~~t~l~~~p~~l~~l~~~~~~~~-~~l~~lr~v~~gG~~l~~~~~~~~ 321 (415)
...+...+..|.+++ ...+++..+++.++++++|++.++|.++..|.+...... .+++++|.++++|+++++++.+++
T Consensus 252 ~~~~~~~~~~g~~~~-~~~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~l~~~~~~G~~~~~~~~~~~ 330 (567)
T PLN02479 252 CFTWTLAALCGTNIC-LRQVTAKAIYSAIANYGVTHFCAAPVVLNTIVNAPKSETILPLPRVVHVMTAGAAPPPSVLFAM 330 (567)
T ss_pred HHHHHHHhhcCceEe-ccCCCHHHHHHHHHHcCCeEEEecHHHHHHHHhhhhhcccccccceeEEEEcCCCCCHHHHHHH
Confidence 654444556665554 466899999999999999999999999999987654333 257899999999999999999999
Q ss_pred HhhCCCCccccccccccCCccccccccccC------CccccCCCcccccccCCe-EEEEeCCCCCCCCCC--CceeEEEe
Q 014952 322 RAKLPHAKLGQGYGMTEAGPVLSMCLAFAK------EPFEIKSGACGTVVRNAE-MKIVDPDTGISLPRN--QAGEICIR 392 (415)
Q Consensus 322 ~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~------~~~~~~~~~~G~p~~~~~-v~i~d~~~~~~~~~g--~~Gel~v~ 392 (415)
.+. +.++++.||+||+++..+.+..... ..........|.+.+++. ++|+|++++++++.+ +.|||+++
T Consensus 331 ~~~--~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~i~d~~~~~~~~~~g~~~GEl~v~ 408 (567)
T PLN02479 331 SEK--GFRVTHTYGLSETYGPSTVCAWKPEWDSLPPEEQARLNARQGVRYIGLEGLDVVDTKTMKPVPADGKTMGEIVMR 408 (567)
T ss_pred Hhc--CCceecccccccccccccceeccccccccCcccccccccccCCCcCCcCceeEEcCCCCcccCCCCCCceEEEEe
Confidence 875 7899999999998754443310000 000111245788888886 899998788888764 67999999
Q ss_pred cCccccccccCCcceeeee
Q 014952 393 GAQIMKGTYHIYAPFLLSI 411 (415)
Q Consensus 393 ~~~~~~gY~~~~~~~~~~~ 411 (415)
|++++.|||++|+.+...|
T Consensus 409 g~~~~~GY~~~~~~t~~~~ 427 (567)
T PLN02479 409 GNMVMKGYLKNPKANEEAF 427 (567)
T ss_pred ccchhhhhhcCcccccchh
Confidence 9999999999999998876
No 99
>PRK08279 long-chain-acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.3e-45 Score=368.69 Aligned_cols=373 Identities=20% Similarity=0.272 Sum_probs=296.6
Q ss_pred CCCCHHhHHHhhhccCCCCcEEEeCCCCCeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHHhCC
Q 014952 23 NHLPLHTYCFENISQFADRPCIINGPTGDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGA 102 (415)
Q Consensus 23 ~~~tl~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~ 102 (415)
...|+.+.|.++++++|+++|+++. ++.+||+||.++++++|+.|.+.|+++||+|+++++|+.+++++++||+++|+
T Consensus 35 ~~~tl~~~l~~~a~~~p~~~Ai~~~--~~~~Ty~eL~~~~~~la~~L~~~g~~~gd~V~i~~~n~~~~v~~~lA~~~~G~ 112 (600)
T PRK08279 35 SKRSLGDVFEEAAARHPDRPALLFE--DQSISYAELNARANRYAHWAAARGVGKGDVVALLMENRPEYLAAWLGLAKLGA 112 (600)
T ss_pred CcccHHHHHHHHHHhCCCCcEEEeC--CCcccHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHhcCc
Confidence 3589999999999999999999997 78999999999999999999999999999999999999999999999999999
Q ss_pred eEeecCCCCCHHHHHHHHHhcCceEEEEcccchHHHHhhhhhcC-ceEEEeCCCCC--Cccchhhhhh--hcccC--CCC
Q 014952 103 TSTTANPFYTPPEIAKQAIASKAKIIITQAVYNDKVRDLSEHHG-ARIVTIDPPPE--NCLHFSELIT--QADEN--EIP 175 (415)
Q Consensus 103 ~~v~l~~~~~~~~~~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~-~~~i~~~~~~~--~~~~~~~l~~--~~~~~--~~~ 175 (415)
+++++++.++.+++.++++++++++++++++..+.+........ ...+.+.+... ....+.++.. ..... ...
T Consensus 113 ~~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (600)
T PRK08279 113 VVALLNTQQRGAVLAHSLNLVDAKHLIVGEELVEAFEEARADLARPPRLWVAGGDTLDDPEGYEDLAAAAAGAPTTNPAS 192 (600)
T ss_pred EEeecCCCCCHHHHHHHHHhcCCCEEEEChHHHHHHHHHhhhhcccceEEEecCccccccccHHHHhhhcccCCccCCCc
Confidence 99999999999999999999999999999988777666543322 22222222110 0112222211 11111 111
Q ss_pred cccCCCCCeEEEecCCCCCCCCceeeechHHHHHHHhhhhcCCCCCccCCCCcEEEEccchHHHHhhHHHHHHHHHcCcE
Q 014952 176 AVKINPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAA 255 (415)
Q Consensus 176 ~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~l~~l~~G~~ 255 (415)
......+++++|+|||||||.||+|.++|+++.+++..... .+.+.++++++..+|++|.+++...++.++..|++
T Consensus 193 ~~~~~~~~~a~il~TSGTTG~PKgV~~sh~~l~~~~~~~~~----~~~l~~~d~~l~~~pl~h~~g~~~~~~~~l~~G~~ 268 (600)
T PRK08279 193 RSGVTAKDTAFYIYTSGTTGLPKAAVMSHMRWLKAMGGFGG----LLRLTPDDVLYCCLPLYHNTGGTVAWSSVLAAGAT 268 (600)
T ss_pred ccCCCccccEEEEEcCCCCCCCcEEEEeHHHHHHHHHHHHH----hcCCCCCcEEEEecCchhhhhHHHHHHHHHhcCcE
Confidence 23346689999999999999999999999999998887776 45688999999999999999998777788999999
Q ss_pred EEEcCCCCHHHHHHHHHhcCceeeecchHHHHHHHcCCCCCCCCcccceeeeecCCCCCHHHHHHHHhhCCCCccccccc
Q 014952 256 ILIMQKFDIVKLMELVQKYKVTVAPFVPPIVLAVAKSGDVDKYDMSSIRTVMSGAAPMGKELEDAVRAKLPHAKLGQGYG 335 (415)
Q Consensus 256 ~v~~~~~~~~~~~~~l~~~~~t~l~~~p~~l~~l~~~~~~~~~~l~~lr~v~~gG~~l~~~~~~~~~~~~~~~~~~~~YG 335 (415)
+++.+.+++..+++.++++++|++.++|.++..+++..........++|.+ +|+.+++++.+++.+.++...+++.||
T Consensus 269 ~v~~~~~~~~~~~~~i~~~~~t~~~~~p~l~~~l~~~~~~~~~~~~~l~~~--~g~~l~~~~~~~~~~~~~~~~l~~~YG 346 (600)
T PRK08279 269 LALRRKFSASRFWDDVRRYRATAFQYIGELCRYLLNQPPKPTDRDHRLRLM--IGNGLRPDIWDEFQQRFGIPRILEFYA 346 (600)
T ss_pred EEEcCCCCHHHHHHHHHHhcceEEeehHHHHHHHHhCCCCccccCcceeEE--ecCCCCHHHHHHHHHHhCcceeeeeec
Confidence 999999999999999999999999999999999887654444445677764 477899999999999996567999999
Q ss_pred cccCCccccccccccCCccccCCCccccccc----CCeEEEEeCCC--------C--CCCCCCCceeEE--EecCccccc
Q 014952 336 MTEAGPVLSMCLAFAKEPFEIKSGACGTVVR----NAEMKIVDPDT--------G--ISLPRNQAGEIC--IRGAQIMKG 399 (415)
Q Consensus 336 ~tE~~~~~~~~~~~~~~~~~~~~~~~G~p~~----~~~v~i~d~~~--------~--~~~~~g~~Gel~--v~~~~~~~g 399 (415)
+||++... .. .....+++|++.+ +..+...|+++ + .+++.|+.|||+ ++|+.++.|
T Consensus 347 ~tE~~~~~-~~-------~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~g~~Gel~~~i~~~~~~~G 418 (600)
T PRK08279 347 ASEGNVGF-IN-------VFNFDGTVGRVPLWLAHPYAIVKYDVDTGEPVRDADGRCIKVKPGEVGLLIGRITDRGPFDG 418 (600)
T ss_pred ccccceee-cc-------cCCCCcccccccccccccceeeeeccCcCceeeCCCCccccCCCCCceeEEEEecCcccccc
Confidence 99988422 11 1234567777666 33333222222 2 357899999998 789999999
Q ss_pred cccCCcceeeeee
Q 014952 400 TYHIYAPFLLSIV 412 (415)
Q Consensus 400 Y~~~~~~~~~~~~ 412 (415)
| ++++.+...|+
T Consensus 419 Y-~~~~~t~~~~~ 430 (600)
T PRK08279 419 Y-TDPEASEKKIL 430 (600)
T ss_pred c-CCchhhHHHHh
Confidence 9 88888876653
No 100
>PRK05850 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.7e-45 Score=366.58 Aligned_cols=373 Identities=17% Similarity=0.253 Sum_probs=282.9
Q ss_pred CCHHhHHHhhhccCCCCcEEEeCC-------CCCeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHH
Q 014952 25 LPLHTYCFENISQFADRPCIINGP-------TGDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGA 97 (415)
Q Consensus 25 ~tl~~~l~~~a~~~p~~~a~~~~~-------~~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~ 97 (415)
+++.+.|.+++..+|+++|+++.+ ..+.+||+||.++++++|+.|.++| ++||+|+++++|+++++++++||
T Consensus 1 ~s~~~~l~~~a~~~p~~~a~~~~~~~~~~~~~~~~lty~eL~~~v~~~A~~L~~~g-~~gd~V~l~~~n~~~~~~~~lA~ 79 (578)
T PRK05850 1 SSVPSLLRERASLQPDDAAFTFIDYEQDPAGVAETLTWSQLYRRTLNVAEELRRHG-STGDRAVILAPQGLEYIVAFLGA 79 (578)
T ss_pred CcHHHHHHHHHhcCCCceEEEEEccCCCCCCceeeecHHHHHHHHHHHHHHHHHhC-CCCCEEEEEcCCcccHHHHHHHH
Confidence 468899999999999999998642 1378999999999999999999999 68999999999999999999999
Q ss_pred HHhCCeEeecCC---CCCHHHHHHHHHhcCceEEEEcccchHHHHhhhhhc----CceEEEeCCCCCCccchhhhhhhcc
Q 014952 98 SYIGATSTTANP---FYTPPEIAKQAIASKAKIIITQAVYNDKVRDLSEHH----GARIVTIDPPPENCLHFSELITQAD 170 (415)
Q Consensus 98 ~~~G~~~v~l~~---~~~~~~~~~~l~~~~~~~vl~~~~~~~~~~~~~~~~----~~~~i~~~~~~~~~~~~~~l~~~~~ 170 (415)
+++|++++|+++ ..+.+++.++++++++++++++++..+.+....... ...++.++.. ++ ..
T Consensus 80 ~~~G~v~vpl~~~~~~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~-~~-- 148 (578)
T PRK05850 80 LQAGLIAVPLSVPQGGAHDERVSAVLRDTSPSVVLTTSAVVDDVTEYVAPQPGQSAPPVIEVDLL--------DL-DS-- 148 (578)
T ss_pred HHcCceEEecCCCCccchHHHHHHHHHhcCCCEEEEcHHHHHHHHHHHhhcccccccceEeeccc--------cc-cc--
Confidence 999999999997 446789999999999999999988766655432111 1122222210 00 00
Q ss_pred cCCCCcccCCCCCeEEEecCCCCCCCCceeeechHHHHHHHhhhhcCCCCC--ccCCCCcEEEEccchHHHHhhHHHHHH
Q 014952 171 ENEIPAVKINPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPN--LYLHKEDVILCVLPLFHIYSLNSVLLC 248 (415)
Q Consensus 171 ~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~--~~~~~~~~~~~~~pl~~~~g~~~~~l~ 248 (415)
..........++++++|+|||||||.||+|.++|+++.............. .....++++++.+|++|..|++..++.
T Consensus 149 ~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~g~~~~~~~ 228 (578)
T PRK05850 149 PRGSDARPRDLPSTAYLQYTSGSTRTPAGVMVSHRNVIANFEQLMSDYFGDTGGVPPPDTTVVSWLPFYHDMGLVLGVCA 228 (578)
T ss_pred CCccccCCCCCCCeEEEEeCCCCCCCCceEEEeHHHHHHHHHHHHHhhccccccCCCCcceEEEECCCCCCchhHHHHHH
Confidence 001112234568999999999999999999999999988765544321100 013457899999999999998877899
Q ss_pred HHHcCcEEEEcCC----CCHHHHHHHHHhcCceeeecchHHHHH-HHcCC---CCCCCCcccceeeeecCCCCCHHHHHH
Q 014952 249 ALRVGAAILIMQK----FDIVKLMELVQKYKVTVAPFVPPIVLA-VAKSG---DVDKYDMSSIRTVMSGAAPMGKELEDA 320 (415)
Q Consensus 249 ~l~~G~~~v~~~~----~~~~~~~~~l~~~~~t~l~~~p~~l~~-l~~~~---~~~~~~l~~lr~v~~gG~~l~~~~~~~ 320 (415)
++..|+++++.++ .++..+++.++++++++. .+|.++.. +.... .....+++++|.+++||+++++++.++
T Consensus 229 ~l~~G~~~~~~~~~~~~~~p~~~~~~i~~~~~~~~-~~p~~~~~~~~~~~~~~~~~~~~~~~lr~~~~gg~~~~~~~~~~ 307 (578)
T PRK05850 229 PILGGCPAVLTSPVAFLQRPARWMQLLASNPHAFS-AAPNFAFELAVRKTSDDDMAGLDLGGVLGIISGSERVHPATLKR 307 (578)
T ss_pred HHhcCCcEEEeCHHHHHHCHHHHHHHHHHcCCeEE-eCCcHHHHHHHHhcchhhhcCcchhhheeEEECcCCCCHHHHHH
Confidence 9999999999864 278999999999999865 56655443 33221 122346789999999999999999999
Q ss_pred HHhhCC-----CCccccccccccCCccccccccccCC-----------cc---------ccCCCcccccccCCeEEEEeC
Q 014952 321 VRAKLP-----HAKLGQGYGMTEAGPVLSMCLAFAKE-----------PF---------EIKSGACGTVVRNAEMKIVDP 375 (415)
Q Consensus 321 ~~~~~~-----~~~~~~~YG~tE~~~~~~~~~~~~~~-----------~~---------~~~~~~~G~p~~~~~v~i~d~ 375 (415)
+.+.|+ +..+++.||+||++..+......... .. .....++|+|. +.+++|+|+
T Consensus 308 ~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~g~p~-~~~~~ivd~ 386 (578)
T PRK05850 308 FADRFAPFNLRETAIRPSYGLAEATVYVATREPGQPPESVRFDYEKLSAGHAKRCETGGGTPLVSYGSPR-SPTVRIVDP 386 (578)
T ss_pred HHHHHHhcCcCcccccCccchhhhhhheeccCCCCCceEEEECHHHHhCCceEecCCCCCceEEeccCCC-CCEEEEEcC
Confidence 998873 34689999999987543322100000 00 00112345553 579999998
Q ss_pred CCCCCCCCCCceeEEEecCccccccccCCcceeeee
Q 014952 376 DTGISLPRNQAGEICIRGAQIMKGTYHIYAPFLLSI 411 (415)
Q Consensus 376 ~~~~~~~~g~~Gel~v~~~~~~~gY~~~~~~~~~~~ 411 (415)
+++++|+.|+.|||+|+|++++.|||++|+.+...|
T Consensus 387 ~~~~~~~~g~~Gel~v~g~~~~~gY~~~~~~t~~~f 422 (578)
T PRK05850 387 DTCIECPAGTVGEIWVHGDNVAAGYWQKPEETERTF 422 (578)
T ss_pred CCCcCCCCCCEEEEEEecCcccccccCChhhhHHHh
Confidence 888999999999999999999999999999988776
No 101
>PRK07787 acyl-CoA synthetase; Validated
Probab=100.00 E-value=7.5e-45 Score=353.02 Aligned_cols=336 Identities=22% Similarity=0.263 Sum_probs=279.5
Q ss_pred hccCCCCcEEEeCCCCCeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHHhCCeEeecCCCCCHH
Q 014952 35 ISQFADRPCIINGPTGDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGATSTTANPFYTPP 114 (415)
Q Consensus 35 a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~ 114 (415)
.+..++++++++. ++++||+||.++++++|..|. ++|+|+++++|+.+++++++||+++|++++|+++..+.+
T Consensus 10 ~~~~~~~~a~~~~--~~~~Ty~el~~~~~~~a~~L~-----~~~~V~l~~~~~~~~~~~~la~~~~G~~~v~l~~~~~~~ 82 (471)
T PRK07787 10 AAAADIADAVRIG--GRVLSRSDLAGAATAVAERVA-----GARRVAVLATPTLATVLAVVGALIAGVPVVPVPPDSGVA 82 (471)
T ss_pred hcccCCceEEEeC--CcEEEHHHHHHHHHHHHHHhc-----cCCEEEEECCCCHHHHHHHHHHHhcCcEEeecCCCCChH
Confidence 4456789999987 899999999999999999996 479999999999999999999999999999999999999
Q ss_pred HHHHHHHhcCceEEEEcccchHHHHhhhhhcCceEEEeCCCCCCccchhhhhhhcccCCCCcccCCCCCeEEEecCCCCC
Q 014952 115 EIAKQAIASKAKIIITQAVYNDKVRDLSEHHGARIVTIDPPPENCLHFSELITQADENEIPAVKINPDDVVALPYSSGTT 194 (415)
Q Consensus 115 ~~~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~i~~TSGtT 194 (415)
++..+++++++++++++.+... .....+.+..... . ........++++++|+||||||
T Consensus 83 ~l~~~l~~~~~~~il~~~~~~~--------~~~~~~~~~~~~~---~-----------~~~~~~~~~~~~a~i~~TSGTT 140 (471)
T PRK07787 83 ERRHILADSGAQAWLGPAPDDP--------AGLPHVPVRLHAR---S-----------WHRYPEPDPDAPALIVYTSGTT 140 (471)
T ss_pred HHHHHHHhcCCCEEEecCCccc--------ccccceeeecccc---c-----------cccCCCCCCCceEEEEECCCCC
Confidence 9999999999999999764210 0111111100000 0 0011124568999999999999
Q ss_pred CCCceeeechHHHHHHHhhhhcCCCCCccCCCCcEEEEccchHHHHhhHHHHHHHHHcCcEEEEcCCCCHHHHHHHHHhc
Q 014952 195 GLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIMQKFDIVKLMELVQKY 274 (415)
Q Consensus 195 G~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~l~~l~~G~~~v~~~~~~~~~~~~~l~~~ 274 (415)
|.||+|.++|+++......... .+.+.++++++..+|++|..|+...++.++..|+++++.+.+++..+++.++ +
T Consensus 141 G~PK~v~~t~~~l~~~~~~~~~----~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~-~ 215 (471)
T PRK07787 141 GPPKGVVLSRRAIAADLDALAE----AWQWTADDVLVHGLPLFHVHGLVLGVLGPLRIGNRFVHTGRPTPEAYAQALS-E 215 (471)
T ss_pred CCCCEEEEeHHHHHHHHHHHHH----hcCCCccceeEeccCCeeechhHHHHHHHHhcCCEEEecCCCCHHHHHHHHh-h
Confidence 9999999999999988776665 4457788999999999999999888899999999999998899999999999 9
Q ss_pred CceeeecchHHHHHHHcCCCCCCCCcccceeeeecCCCCCHHHHHHHHhhCCCCccccccccccCCccccccccccCCcc
Q 014952 275 KVTVAPFVPPIVLAVAKSGDVDKYDMSSIRTVMSGAAPMGKELEDAVRAKLPHAKLGQGYGMTEAGPVLSMCLAFAKEPF 354 (415)
Q Consensus 275 ~~t~l~~~p~~l~~l~~~~~~~~~~l~~lr~v~~gG~~l~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~ 354 (415)
++|++.++|.++..+.+.... ...++++|.++.||+++++++.+++.+.+ +.++++.||+||++...+.. ...
T Consensus 216 ~~t~~~~~P~~~~~l~~~~~~-~~~l~~l~~~~~gg~~~~~~~~~~~~~~~-~~~~~~~YG~tE~~~~~~~~-----~~~ 288 (471)
T PRK07787 216 GGTLYFGVPTVWSRIAADPEA-ARALRGARLLVSGSAALPVPVFDRLAALT-GHRPVERYGMTETLITLSTR-----ADG 288 (471)
T ss_pred CceEEEcchHHHHHHHhCccc-cccccceeEEEECCCCCCHHHHHHHHHHc-CCCeecccCccccCcceecC-----CCC
Confidence 999999999999999875432 34578999999999999999999999988 78999999999998543322 222
Q ss_pred ccCCCcccccccCCeEEEEeCCCCCCCC-CCC-ceeEEEecCccccccccCCcceeeeee
Q 014952 355 EIKSGACGTVVRNAEMKIVDPDTGISLP-RNQ-AGEICIRGAQIMKGTYHIYAPFLLSIV 412 (415)
Q Consensus 355 ~~~~~~~G~p~~~~~v~i~d~~~~~~~~-~g~-~Gel~v~~~~~~~gY~~~~~~~~~~~~ 412 (415)
...++++|+|+++++++|+|++ +++++ .|+ .|||+++|++++.||+++|+.+...|.
T Consensus 289 ~~~~~~vG~~~~g~~~~i~d~~-~~~~~~~~~~~Gei~v~g~~~~~gy~~~~~~t~~~~~ 347 (471)
T PRK07787 289 ERRPGWVGLPLAGVETRLVDED-GGPVPHDGETVGELQVRGPTLFDGYLNRPDATAAAFT 347 (471)
T ss_pred cccCCcccccCCCcEEEEECCC-CCCCCCCCCCceEEEEECcccchhhcCChhhchhccc
Confidence 3456789999999999999955 78887 444 899999999999999999999987774
No 102
>PRK08162 acyl-CoA synthetase; Validated
Probab=100.00 E-value=5.4e-44 Score=353.51 Aligned_cols=379 Identities=23% Similarity=0.292 Sum_probs=293.1
Q ss_pred CCCHHhHHHhhhccCCCCcEEEeCCCCCeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHHhCCe
Q 014952 24 HLPLHTYCFENISQFADRPCIINGPTGDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGAT 103 (415)
Q Consensus 24 ~~tl~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~ 103 (415)
++|..+.|.+.++.+|+++|+.+. +..+||+||.++++++|..|.+.|+++||+|+++++|+.+++++++||+++|++
T Consensus 17 ~~~~~~~~~~~~~~~~~~~a~~~~--~~~~ty~~L~~~~~~~a~~L~~~g~~~g~~v~i~~~~~~~~~~~~lA~~~~G~~ 94 (545)
T PRK08162 17 PLTPLSFLERAAEVYPDRPAVIHG--DRRRTWAETYARCRRLASALARRGIGRGDTVAVLLPNIPAMVEAHFGVPMAGAV 94 (545)
T ss_pred cCCHHHHHHHHHHHCCCCeEEEEC--CeEEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCchHHHHHHHHHHHhCcE
Confidence 588999999999999999999986 789999999999999999999999999999999999999999999999999999
Q ss_pred EeecCCCCCHHHHHHHHHhcCceEEEEcccchHHHHhhhhhcC-ceEEEeCCCC--------CCccchhhhhhhcccCCC
Q 014952 104 STTANPFYTPPEIAKQAIASKAKIIITQAVYNDKVRDLSEHHG-ARIVTIDPPP--------ENCLHFSELITQADENEI 174 (415)
Q Consensus 104 ~v~l~~~~~~~~~~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~-~~~i~~~~~~--------~~~~~~~~l~~~~~~~~~ 174 (415)
++|+++..+.+++..+++.++++.++++.+..+.+........ .+.+.++... .....++++.........
T Consensus 95 ~vpl~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (545)
T PRK08162 95 LNTLNTRLDAASIAFMLRHGEAKVLIVDTEFAEVAREALALLPGPKPLVIDVDDPEYPGGRFIGALDYEAFLASGDPDFA 174 (545)
T ss_pred EeccccccChHHHHHHHHhCCCeEEEEccchhhHHHHHHhhCCCCceEEEecCccccccCCCcccccHHHHhccCCcccc
Confidence 9999999999999999999999999999888776655433222 2223332111 112234444222111111
Q ss_pred CcccCCCCCeEEEecCCCCCCCCceeeechHHHHHHHhhhhcCCCCCccCCCCcEEEEccchHHHHhhHHHHHHHHHcCc
Q 014952 175 PAVKINPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGA 254 (415)
Q Consensus 175 ~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~l~~l~~G~ 254 (415)
.......++.++|+|||||||.||+|+++|+++......... .+.+..++++++.+|++|..++...++. ...|+
T Consensus 175 ~~~~~~~~~~~~i~~TSGTTG~PKgv~~t~~~~~~~~~~~~~----~~~~~~~~~~l~~~pl~h~~~~~~~~~~-~~~~g 249 (545)
T PRK08162 175 WTLPADEWDAIALNYTSGTTGNPKGVVYHHRGAYLNALSNIL----AWGMPKHPVYLWTLPMFHCNGWCFPWTV-AARAG 249 (545)
T ss_pred ccCCCCCCCeEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHH----hcCCCCCCeeEeccCcHhhhhHHHHHHH-HHHcc
Confidence 112233457899999999999999999999987665544433 2346678899999999999988754444 44566
Q ss_pred EEEEcCCCCHHHHHHHHHhcCceeeecchHHHHHHHcCCCCCCCCcccceeeeecCCCCCHHHHHHHHhhCCCCcccccc
Q 014952 255 AILIMQKFDIVKLMELVQKYKVTVAPFVPPIVLAVAKSGDVDKYDMSSIRTVMSGAAPMGKELEDAVRAKLPHAKLGQGY 334 (415)
Q Consensus 255 ~~v~~~~~~~~~~~~~l~~~~~t~l~~~p~~l~~l~~~~~~~~~~l~~lr~v~~gG~~l~~~~~~~~~~~~~~~~~~~~Y 334 (415)
..++..++++..+++.++++++|++.++|.++..|++........+.+.+.++++|+.++.+..+.+.+. +.++++.|
T Consensus 250 ~~~~~~~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~--~~~~~~~Y 327 (545)
T PRK08162 250 TNVCLRKVDPKLIFDLIREHGVTHYCGAPIVLSALINAPAEWRAGIDHPVHAMVAGAAPPAAVIAKMEEI--GFDLTHVY 327 (545)
T ss_pred EEEEeCCCCHHHHHHHHHHcCCeEEEechHHHHHHHhCccccccCCccceEEEECCCCCCHHHHHHHHHh--CCceeecc
Confidence 6666677899999999999999999999999999987654433345667777899999999999998764 78999999
Q ss_pred ccccCCccccccccccCC------ccccCCCcccccccC-CeEEEEeCCCCCCCCC-C-CceeEEEecCccccccccCCc
Q 014952 335 GMTEAGPVLSMCLAFAKE------PFEIKSGACGTVVRN-AEMKIVDPDTGISLPR-N-QAGEICIRGAQIMKGTYHIYA 405 (415)
Q Consensus 335 G~tE~~~~~~~~~~~~~~------~~~~~~~~~G~p~~~-~~v~i~d~~~~~~~~~-g-~~Gel~v~~~~~~~gY~~~~~ 405 (415)
|+||+++.+..+...... .......++|.+.+. ..++|+|++++++++. | +.|||+++|+.++.||+++++
T Consensus 328 G~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~~~~g~~~Gel~v~g~~~~~gY~~~~~ 407 (545)
T PRK08162 328 GLTETYGPATVCAWQPEWDALPLDERAQLKARQGVRYPLQEGVTVLDPDTMQPVPADGETIGEIMFRGNIVMKGYLKNPK 407 (545)
T ss_pred cccccCcceeecccccccccCCccchhhccCCCCcccCCcceEEEEcCCCCcccCCCCCceeEEEEecCcchhhhcCChh
Confidence 999997655544211100 001123456776653 3688999878888876 3 469999999999999999999
Q ss_pred ceeeee
Q 014952 406 PFLLSI 411 (415)
Q Consensus 406 ~~~~~~ 411 (415)
.+...|
T Consensus 408 ~~~~~~ 413 (545)
T PRK08162 408 ATEEAF 413 (545)
T ss_pred hhHHHh
Confidence 887765
No 103
>PRK07798 acyl-CoA synthetase; Validated
Probab=100.00 E-value=4.7e-44 Score=353.33 Aligned_cols=374 Identities=20% Similarity=0.249 Sum_probs=295.2
Q ss_pred CCHHhHHHhhhccCCCCcEEEeCCCCCeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHHhCCeE
Q 014952 25 LPLHTYCFENISQFADRPCIINGPTGDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGATS 104 (415)
Q Consensus 25 ~tl~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~ 104 (415)
+|+.+++.+.++++|+++|+++. ++.+||.||.++++++|+.|.+.|+++||+|+++++|++++++++|||+++|+++
T Consensus 3 ~~l~~~~~~~a~~~p~~~a~~~~--~~~~ty~el~~~~~~la~~L~~~g~~~~~~v~v~~~n~~~~~~~~~a~~~~G~~~ 80 (533)
T PRK07798 3 WNIADLFEAVADAVPDRVALVCG--DRRLTYAELEERANRLAHYLIAQGLGPGDHVGIYARNRIEYVEAMLGAFKARAVP 80 (533)
T ss_pred ccHHHHHHHHHHhCCCceEEEEC--CceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHhcCeEE
Confidence 68999999999999999999997 8999999999999999999999999999999999999999999999999999999
Q ss_pred eecCCCCCHHHHHHHHHhcCceEEEEcccchHHHHhhhhhcC--ceEEEeCCCCC-----CccchhhhhhhcccCCCCcc
Q 014952 105 TTANPFYTPPEIAKQAIASKAKIIITQAVYNDKVRDLSEHHG--ARIVTIDPPPE-----NCLHFSELITQADENEIPAV 177 (415)
Q Consensus 105 v~l~~~~~~~~~~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~--~~~i~~~~~~~-----~~~~~~~l~~~~~~~~~~~~ 177 (415)
+++++.++.+++.++++++++++++++.+..+.+.+...... ..++.++.... +...+++++.... ......
T Consensus 81 v~l~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 159 (533)
T PRK07798 81 VNVNYRYVEDELRYLLDDSDAVALVYEREFAPRVAEVLPRLPKLRTLVVVEDGSGNDLLPGAVDYEDALAAGS-PERDFG 159 (533)
T ss_pred EecCcCCCHHHHHHHHhhcCCCEEEEchhhHHHHHHHhccCCCccEEEEecCCcccccCCccccHHHHHhccC-CcCCCC
Confidence 999999999999999999999999999887777666533222 23444543221 1335555532222 111111
Q ss_pred cCCCCCeEEEecCCCCCCCCceeeechHHHHHHHhhhhcCCC-----CCc------cCCCCcEEEEccchHHHHhhHHHH
Q 014952 178 KINPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGEN-----PNL------YLHKEDVILCVLPLFHIYSLNSVL 246 (415)
Q Consensus 178 ~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~-----~~~------~~~~~~~~~~~~pl~~~~g~~~~~ 246 (415)
. ...+.++|+|||||||.||+|+++|+++............ ... ....+++++...|++|..+++ .+
T Consensus 160 ~-~~~~~~~i~~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~~~~-~~ 237 (533)
T PRK07798 160 E-RSPDDLYLLYTGGTTGMPKGVMWRQEDIFRVLLGGRDFATGEPIEDEEELAKRAAAGPGMRRFPAPPLMHGAGQW-AA 237 (533)
T ss_pred C-CCCCceEEEECCCCCCCCcEEEEecHHHHHHHhhhhhhhcccchhhhhhhcccccCCCCceEEEecchhhhhhHH-HH
Confidence 2 2334578999999999999999999998765443222110 000 115678999999999999998 58
Q ss_pred HHHHHcCcEEEEcC--CCCHHHHHHHHHhcCceeeecchHHHH-HHHcCCC-CCCCCcccceeeeecCCCCCHHHHHHHH
Q 014952 247 LCALRVGAAILIMQ--KFDIVKLMELVQKYKVTVAPFVPPIVL-AVAKSGD-VDKYDMSSIRTVMSGAAPMGKELEDAVR 322 (415)
Q Consensus 247 l~~l~~G~~~v~~~--~~~~~~~~~~l~~~~~t~l~~~p~~l~-~l~~~~~-~~~~~l~~lr~v~~gG~~l~~~~~~~~~ 322 (415)
+.++..|+++++.+ .+++..+++.++++++|++.++|..+. .+.+... ....+++++|.+++||++++.++.+++.
T Consensus 238 ~~~l~~G~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~i~~gG~~~~~~~~~~~~ 317 (533)
T PRK07798 238 FAALFSGQTVVLLPDVRFDADEVWRTIEREKVNVITIVGDAMARPLLDALEARGPYDLSSLFAIASGGALFSPSVKEALL 317 (533)
T ss_pred HHHHhcCceEEEecCCCcCHHHHHHHHHHhCCeEEEechHHHHHHHHHHhcccccCCCCceEEEEECCCCCCHHHHHHHH
Confidence 89999999999998 789999999999999999999987553 2333222 3345678999999999999999999999
Q ss_pred hhCCCCccccccccccCCccccccccccCCccccCCCccc--ccccCCeEEEEeCCCCCCCCCCCc--eeEEEecCcccc
Q 014952 323 AKLPHAKLGQGYGMTEAGPVLSMCLAFAKEPFEIKSGACG--TVVRNAEMKIVDPDTGISLPRNQA--GEICIRGAQIMK 398 (415)
Q Consensus 323 ~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~G--~p~~~~~v~i~d~~~~~~~~~g~~--Gel~v~~~~~~~ 398 (415)
+.+++..+++.||+||++.+.... ........| ++.++..++|+|+ ++++++.|+. |+|+ +++.++.
T Consensus 318 ~~~~~~~~~~~YG~tE~~~~~~~~-------~~~~~~~~g~~~~~~~~~~~i~~~-~~~~~~~g~~~~g~l~-~~~~~~~ 388 (533)
T PRK07798 318 ELLPNVVLTDSIGSSETGFGGSGT-------VAKGAVHTGGPRFTIGPRTVVLDE-DGNPVEPGSGEIGWIA-RRGHIPL 388 (533)
T ss_pred HHcCCCeEEeeecccccccccccC-------CCCCCccCCCCccCCCceEEEECC-CCCCCCCCCCCeeEEE-eecCccc
Confidence 999888999999999997543322 111112333 7889999999995 4789999987 6665 5678999
Q ss_pred ccccCCcceeeeee
Q 014952 399 GTYHIYAPFLLSIV 412 (415)
Q Consensus 399 gY~~~~~~~~~~~~ 412 (415)
|||++|+.+.+.|.
T Consensus 389 gy~~~~~~t~~~f~ 402 (533)
T PRK07798 389 GYYKDPEKTAETFP 402 (533)
T ss_pred cccCChhhhHHhhc
Confidence 99999998887764
No 104
>TIGR01733 AA-adenyl-dom amino acid adenylation domain. This domain is a subset of the AMP-binding domain found in Pfam (pfam00501) which also hits substrate--CoA ligases and luciferases. Sequences scoring in between trusted and noise for this model may be ambiguous as to whether they activate amino acids or other molecules lacking an alpha amino group.
Probab=100.00 E-value=1.5e-44 Score=344.91 Aligned_cols=340 Identities=25% Similarity=0.339 Sum_probs=281.3
Q ss_pred eHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEcCCchhHHHHHHHHHHhCCeEeecCCCCCHHHHHHHHHhcCceEEEEcc
Q 014952 54 TYADVELTSRKVAAGLSK-LGVQKGDVIMLLLQNCPQFVFAFLGASYIGATSTTANPFYTPPEIAKQAIASKAKIIITQA 132 (415)
Q Consensus 54 Ty~el~~~~~~~a~~L~~-~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~vl~~~ 132 (415)
||.||.+.++++|+.|.+ .|+++||+|+++++|+.+++++++||+++|++++|+++.++.+++.+++++++++.++++.
T Consensus 1 t~~~l~~~~~~~a~~l~~~~g~~~gd~v~l~~~n~~~~~~~~~a~~~~G~~~v~~~~~~~~~~~~~~l~~~~~~~ii~~~ 80 (408)
T TIGR01733 1 TYRELDERANRLARHLRAAGGVGPGDRVAVLLERSAELVVAILAVLKAGAAYVPLDPAYPAERLAFILEDAGARLLLTDS 80 (408)
T ss_pred CHHHHHHHHHHHHHHHHHhhCCCCCCEEEEEeCCCHHHHHHHHHHHHhCCEEEEcCCCCCHHHHHHHHHhcCCCEEEEcC
Confidence 799999999999999998 8999999999999999999999999999999999999999999999999999999999998
Q ss_pred cchHHHHhhhhhcCceEEEeCCCCCCccchhhhhhhcccCCCCcccCCCCCeEEEecCCCCCCCCceeeechHHHHHHHh
Q 014952 133 VYNDKVRDLSEHHGARIVTIDPPPENCLHFSELITQADENEIPAVKINPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVA 212 (415)
Q Consensus 133 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~ 212 (415)
.....+... ....+..+.. ....................+++++++|||||||.||+|.++|+++.....
T Consensus 81 ~~~~~~~~~----~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTtG~pK~v~~s~~~~~~~~~ 150 (408)
T TIGR01733 81 ALASRLAGL----VLPIILVDPL------ELAALDDAPAPPPPDAPSGPDDLAYVIYTSGSTGRPKGVVVTHRSLVNLLA 150 (408)
T ss_pred chhhhcccc----CCceEEechh------hhhhcccccccccccCCCCCCCcEEEEEcCCCCCCCCEEEeccHHHHHHHH
Confidence 766654332 1122222210 000000010111111124578999999999999999999999999998888
Q ss_pred hhhcCCCCCccCCCCcEEEEccchHHHHhhHHHHHHHHHcCcEEEEcCCCC---HHHHHHHHHhcCceeeecchHHHHHH
Q 014952 213 QQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIMQKFD---IVKLMELVQKYKVTVAPFVPPIVLAV 289 (415)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~l~~l~~G~~~v~~~~~~---~~~~~~~l~~~~~t~l~~~p~~l~~l 289 (415)
.... .+.+.+++++++..|++|..++. .++.++..|+++++.+... +..+.+.++++++|.+.++|.++..+
T Consensus 151 ~~~~----~~~~~~~~~~~~~~p~~~~~~~~-~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~~p~~~~~l 225 (408)
T TIGR01733 151 WLAR----RYGLDPDDRVLQFASLSFDASVE-EIFGTLLAGATLVVPPEDEERDAALLAALIAEHPVTVLNLTPSLLALL 225 (408)
T ss_pred HHHH----hcCCCCCceEEEecCCccchhHH-HHHHHHhCCCEEEEcChhhccCHHHHHHHHHHcCceEEEeCHHHHHHH
Confidence 7776 44577899999999999999887 5899999999999987643 68899999999999999999999999
Q ss_pred HcCCCCCCCCcccceeeeecCCCCCHHHHHHHHhhCCCCccccccccccCCccccccccccCCcccc-CCCcccccccCC
Q 014952 290 AKSGDVDKYDMSSIRTVMSGAAPMGKELEDAVRAKLPHAKLGQGYGMTEAGPVLSMCLAFAKEPFEI-KSGACGTVVRNA 368 (415)
Q Consensus 290 ~~~~~~~~~~l~~lr~v~~gG~~l~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~-~~~~~G~p~~~~ 368 (415)
.+... ..++++|.+++||+++++++.+++.+.+++..+++.||+||++++++.... ....... +..++|+|++++
T Consensus 226 ~~~~~---~~~~~l~~v~~~g~~~~~~~~~~~~~~~~~~~i~~~YG~tE~g~~~~~~~~-~~~~~~~~~~~~~G~~~~~~ 301 (408)
T TIGR01733 226 AAALP---PALASLRLVILGGEALTPALVDRWRARGPGARLINLYGPTETTVWSTATLV-DADDAPRESPVPIGRPLANT 301 (408)
T ss_pred HHhhh---hcccCceEEEEeCccCCHHHHHHHHHhCCCcEEEecccCCceEEEEEEEEc-CccccCCccccccCcccCCc
Confidence 88754 567899999999999999999999999965899999999999976653211 1111111 378899999999
Q ss_pred eEEEEeCCCCCCCCCCCceeEEEecCccccccccCCcceeeeeee
Q 014952 369 EMKIVDPDTGISLPRNQAGEICIRGAQIMKGTYHIYAPFLLSIVC 413 (415)
Q Consensus 369 ~v~i~d~~~~~~~~~g~~Gel~v~~~~~~~gY~~~~~~~~~~~~~ 413 (415)
+++|+|++ +++++.|+.|||+++|++++.||+++|+.++..|..
T Consensus 302 ~~~i~~~~-~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~ 345 (408)
T TIGR01733 302 RLYVLDDD-LRPVPVGVVGELYIGGPGVARGYLNRPELTAERFVP 345 (408)
T ss_pred eEEEECCC-CCCCCCCCceEEEecCccccccccCChhhhhcceee
Confidence 99999966 899999999999999999999999999999888753
No 105
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=100.00 E-value=2.9e-44 Score=383.44 Aligned_cols=365 Identities=22% Similarity=0.351 Sum_probs=292.8
Q ss_pred CCCHHhHHHhhhccCCC-CcEEEeCCCCCeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHHhCC
Q 014952 24 HLPLHTYCFENISQFAD-RPCIINGPTGDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGA 102 (415)
Q Consensus 24 ~~tl~~~l~~~a~~~p~-~~a~~~~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~ 102 (415)
..++.+.+.+.++++|+ +.++.+ .+++++||+||.++++++|+.|++ |+++||+|+++++|+.+++++++||+++|+
T Consensus 630 ~~~~~~~l~~~~~~~~~~~~ai~~-~~~~~~Ty~el~~~~~~lA~~L~~-g~~~gd~V~i~~~n~~~~~~~~la~~~~G~ 707 (1140)
T PRK06814 630 DRTLFEALIEAAKIHGFKKLAVED-PVNGPLTYRKLLTGAFVLGRKLKK-NTPPGENVGVMLPNANGAAVTFFALQSAGR 707 (1140)
T ss_pred cCCHHHHHHHHHHHcCCCCeEeEC-CCCCccCHHHHHHHHHHHHHHHHh-cCCCCCeEEEEcCCchHHHHHHHHHHHCCC
Confidence 46788999999999875 555554 346899999999999999999976 999999999999999999999999999999
Q ss_pred eEeecCCCCCHHHHHHHHHhcCceEEEEcccchHHHH--hhhhh--cCceEEEeCCCCCCccchhhhh--hhcccCCCCc
Q 014952 103 TSTTANPFYTPPEIAKQAIASKAKIIITQAVYNDKVR--DLSEH--HGARIVTIDPPPENCLHFSELI--TQADENEIPA 176 (415)
Q Consensus 103 ~~v~l~~~~~~~~~~~~l~~~~~~~vl~~~~~~~~~~--~~~~~--~~~~~i~~~~~~~~~~~~~~l~--~~~~~~~~~~ 176 (415)
+++|+|+..+.+++.++++++++++++++++..+... ..... ...+++.+++........+++. ........+.
T Consensus 708 v~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 (1140)
T PRK06814 708 VPAMINFSAGIANILSACKAAQVKTVLTSRAFIEKARLGPLIEALEFGIRIIYLEDVRAQIGLADKIKGLLAGRFPLVYF 787 (1140)
T ss_pred EEEEcCCCCCHHHHHHHHHHcCCCEEEecHHHHhhhcchhHHHHhccCceEEEehHhhccCChHHHHHHHhhccCCcccc
Confidence 9999999999999999999999999999876544321 11111 1245555554322211111110 0111111111
Q ss_pred ccCCCCCeEEEecCCCCCCCCceeeechHHHHHHHhhhhcCCCCCccCCCCcEEEEccchHHHHhhHHHHHHHHHcCcEE
Q 014952 177 VKINPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAI 256 (415)
Q Consensus 177 ~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~l~~l~~G~~~ 256 (415)
....++++++|+|||||||.||+|.++|+++.+....... .+..+++|++++.+|++|.+++...++.++..|+++
T Consensus 788 ~~~~~~d~a~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~----~~~~~~~d~~l~~~pl~h~~g~~~~~~~~l~~G~~~ 863 (1140)
T PRK06814 788 CNRDPDDPAVILFTSGSEGTPKGVVLSHRNLLANRAQVAA----RIDFSPEDKVFNALPVFHSFGLTGGLVLPLLSGVKV 863 (1140)
T ss_pred CCCCCCCcEEEEECCCccCCCcEEEecHHHHHHHHHHHHH----hhCCCCcCEEEEecchHHHHHHHHHHHHHHHcCCEE
Confidence 2356799999999999999999999999999888777666 446788999999999999999866788899999999
Q ss_pred EEcCC-CCHHHHHHHHHhcCceeeecchHHHHHHHcCCCCCCCCcccceeeeecCCCCCHHHHHHHHhhCCCCccccccc
Q 014952 257 LIMQK-FDIVKLMELVQKYKVTVAPFVPPIVLAVAKSGDVDKYDMSSIRTVMSGAAPMGKELEDAVRAKLPHAKLGQGYG 335 (415)
Q Consensus 257 v~~~~-~~~~~~~~~l~~~~~t~l~~~p~~l~~l~~~~~~~~~~l~~lr~v~~gG~~l~~~~~~~~~~~~~~~~~~~~YG 335 (415)
++.+. .+...+.+.++++++|++.++|.++..+.+.. +..+++++|.+++||+++++++.+.+.+.+ +.++++.||
T Consensus 864 ~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~l~~l~~~~--~~~~~~~lr~v~~gg~~l~~~~~~~~~~~~-~~~~~~~YG 940 (1140)
T PRK06814 864 FLYPSPLHYRIIPELIYDTNATILFGTDTFLNGYARYA--HPYDFRSLRYVFAGAEKVKEETRQTWMEKF-GIRILEGYG 940 (1140)
T ss_pred EEecCcccHHHHHHHHHhcCCEEEEecHHHHHHHHhhc--ccccccceeEEEEcCCcCCHHHHHHHHHHh-CCcEEeccc
Confidence 98764 56778899999999999999999999887653 345678999999999999999999999998 889999999
Q ss_pred cccCCccccccccccCCccccCCCcccccccCCeEEEEeCCCCCCCCCCCceeEEEecCccccccccCCcce
Q 014952 336 MTEAGPVLSMCLAFAKEPFEIKSGACGTVVRNAEMKIVDPDTGISLPRNQAGEICIRGAQIMKGTYHIYAPF 407 (415)
Q Consensus 336 ~tE~~~~~~~~~~~~~~~~~~~~~~~G~p~~~~~v~i~d~~~~~~~~~g~~Gel~v~~~~~~~gY~~~~~~~ 407 (415)
+||++..+..+ .+...+.+++|+|+|+++++++|.+ + .|+.|||+++|++++.||++++++.
T Consensus 941 ~TE~~~~~~~~-----~~~~~~~~~vG~p~~g~~~~~~~~~-~----~~~~Gel~v~g~~~~~gY~~~~~~~ 1002 (1140)
T PRK06814 941 VTETAPVIALN-----TPMHNKAGTVGRLLPGIEYRLEPVP-G----IDEGGRLFVRGPNVMLGYLRAENPG 1002 (1140)
T ss_pred cccccceEEec-----CCCCCCCCcCCccCCCCeEEEeecC-C----CCCceEEEEeCCCcchhhcCCCCCC
Confidence 99998765443 2233456799999999999998843 2 3678999999999999999987643
No 106
>PRK13391 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=3.6e-44 Score=351.89 Aligned_cols=364 Identities=24% Similarity=0.335 Sum_probs=290.3
Q ss_pred HhhhccCCCCcEEEeCCCCCeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHHhCCeEeecCCCC
Q 014952 32 FENISQFADRPCIINGPTGDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGATSTTANPFY 111 (415)
Q Consensus 32 ~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~ 111 (415)
...++++|+++++++...++.+||.||.++++++|+.|+++|+++|++|+++++|+.+++++++||+++|++++++++.+
T Consensus 4 ~~~a~~~p~~~a~~~~~~~~~~ty~~l~~~~~~la~~L~~~g~~~~~~V~v~~~~~~~~~~~~~a~~~~G~~~~~l~~~~ 83 (511)
T PRK13391 4 GIHAQTTPDKPAVIMASTGEVVTYRELDERSNRLAHLFRSLGLKRGDHVAIFMENNLRYLEVCWAAERSGLYYTCVNSHL 83 (511)
T ss_pred hhhHhhCCCceEEEecCCCCEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHhccEEecccccc
Confidence 45678899999999865578999999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHhcCceEEEEcccchHHHHhhhhhcC-c-eEEEeCC--CCCCccchhhhhhhcccCCCCcccCCCCCeEEE
Q 014952 112 TPPEIAKQAIASKAKIIITQAVYNDKVRDLSEHHG-A-RIVTIDP--PPENCLHFSELITQADENEIPAVKINPDDVVAL 187 (415)
Q Consensus 112 ~~~~~~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~-~-~~i~~~~--~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~i 187 (415)
+.+++.++++++++++++++....+.+........ . ..+.++. .......+++.... .. .......++.+.+
T Consensus 84 ~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~---~~~~~~~~~~a~i 159 (511)
T PRK13391 84 TPAEAAYIVDDSGARALITSAAKLDVARALLKQCPGVRHRLVLDGDGELEGFVGYAEAVAG-LP---ATPIADESLGTDM 159 (511)
T ss_pred CHHHHHHHHhccCCcEEEEchhhHHHHHHHHhcCCCceEEEEecCCCCCcccccHHHHhcC-CC---CCCCCCcccccEE
Confidence 99999999999999999999877666555433322 1 2333332 11122223333111 11 1111234467899
Q ss_pred ecCCCCCCCCceeeec--hHHHHHHH---hhhhcCCCCCccCCCCcEEEEccchHHHHhhHHHHHHHHHcCcEEEEcCCC
Q 014952 188 PYSSGTTGLPKGVMLT--HKGLVTSV---AQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIMQKF 262 (415)
Q Consensus 188 ~~TSGtTG~pK~v~~t--~~~l~~~~---~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~l~~l~~G~~~v~~~~~ 262 (415)
+|||||||.||+|.++ |.+..... ..... .+.+.+.++++...|++|.+++. ..+.++..|+++++.+.+
T Consensus 160 l~TSGtTG~PKgv~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~l~~~p~~h~~~~~-~~~~~~~~g~~~~~~~~~ 234 (511)
T PRK13391 160 LYSSGTTGRPKGIKRPLPEQPPDTPLPLTAFLQR----LWGFRSDMVYLSPAPLYHSAPQR-AVMLVIRLGGTVIVMEHF 234 (511)
T ss_pred EECCCCCCCCCEEEEccccchhhhhhHHHHHHHH----hcCCCCCCeEEEcCCHHHHHHHH-HHHHHHHcCceEEECCCC
Confidence 9999999999999954 55543222 22222 34567889999999999999887 467889999999999889
Q ss_pred CHHHHHHHHHhcCceeeecchHHHHHHHcCCC--CCCCCcccceeeeecCCCCCHHHHHHHHhhCCCCccccccccccCC
Q 014952 263 DIVKLMELVQKYKVTVAPFVPPIVLAVAKSGD--VDKYDMSSIRTVMSGAAPMGKELEDAVRAKLPHAKLGQGYGMTEAG 340 (415)
Q Consensus 263 ~~~~~~~~l~~~~~t~l~~~p~~l~~l~~~~~--~~~~~l~~lr~v~~gG~~l~~~~~~~~~~~~~~~~~~~~YG~tE~~ 340 (415)
++..+++.++++++|++.++|.++..+.+... ....+++++|.+++||+++++++.+++++.+ +..+++.||+||++
T Consensus 235 ~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~~l~~~~~gg~~~~~~~~~~~~~~~-g~~v~~~YG~tE~~ 313 (511)
T PRK13391 235 DAEQYLALIEEYGVTHTQLVPTMFSRMLKLPEEVRDKYDLSSLEVAIHAAAPCPPQVKEQMIDWW-GPIIHEYYAATEGL 313 (511)
T ss_pred CHHHHHHHHHHhCCeEEEehHHHHHHHHhCchhhcccCCccceeEEEEccCCCCHHHHHHHHHHc-CCceeeeecccccc
Confidence 99999999999999999999999988876532 2334678999999999999999999999988 78899999999999
Q ss_pred ccccccccccCCccccCCCcccccccCCeEEEEeCCCCCCCCCCCceeEEEecCccccccccCCcceeeeee
Q 014952 341 PVLSMCLAFAKEPFEIKSGACGTVVRNAEMKIVDPDTGISLPRNQAGEICIRGAQIMKGTYHIYAPFLLSIV 412 (415)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~G~p~~~~~v~i~d~~~~~~~~~g~~Gel~v~~~~~~~gY~~~~~~~~~~~~ 412 (415)
++.... .......++++|+|+++ .++|+| +++++++.|+.|||+++|+ ++.|||++++.+...|.
T Consensus 314 ~~~~~~----~~~~~~~~~~vG~~~~g-~~~i~d-~~~~~~~~g~~Gel~~~g~-~~~gy~~~~~~~~~~~~ 378 (511)
T PRK13391 314 GFTACD----SEEWLAHPGTVGRAMFG-DLHILD-DDGAELPPGEPGTIWFEGG-RPFEYLNDPAKTAEARH 378 (511)
T ss_pred ceEEec----CccccccCCCcCCcccc-eEEEEC-CCCCCCCCCCceEEEEecC-cceEEcCChhHhHHhhc
Confidence 754332 11123456789999999 699999 5689999999999999999 88999999998876654
No 107
>PRK09192 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.7e-44 Score=359.08 Aligned_cols=377 Identities=20% Similarity=0.264 Sum_probs=289.2
Q ss_pred CCCCCCCHHhHHHhhhccCCCCcEEEeCCC-CCeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHH
Q 014952 20 YIPNHLPLHTYCFENISQFADRPCIINGPT-GDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGAS 98 (415)
Q Consensus 20 ~~~~~~tl~~~l~~~a~~~p~~~a~~~~~~-~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~ 98 (415)
..++..|+.++|...++++|+..++....+ .+.+||.||.++++++|++|+++|+++||+|+++++|+.+++++++||+
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ty~eL~~~~~~~a~~L~~~gi~~gd~V~l~~~n~~~~~~~~lA~~ 95 (579)
T PRK09192 16 RYADFPTLVEALDYAALGEAGMNFYDRRGQLEEALPYQTLRARAEAGARRLLALGLKPGDRVALIAETDGDFVEAFFACQ 95 (579)
T ss_pred cccchhhHHHHHHHhhccCCceEEEecCCCEEEEecHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCchhHHHHHHHHH
Confidence 446678999999999999886665433211 2679999999999999999999999999999999999999999999999
Q ss_pred HhCCeEeecCCCCC-------HHHHHHHHHhcCceEEEEcccchHHHHhhhhhcCceEEEeCCCCCCccchhhhhhhccc
Q 014952 99 YIGATSTTANPFYT-------PPEIAKQAIASKAKIIITQAVYNDKVRDLSEHHGARIVTIDPPPENCLHFSELITQADE 171 (415)
Q Consensus 99 ~~G~~~v~l~~~~~-------~~~~~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~ 171 (415)
++|++++|+++... .+++.++++.++++++++++...+.+...........+ ..++++ .....
T Consensus 96 ~~G~~~v~i~~~~~~~~~~~~~~~l~~~i~~~~~~~il~~~~~~~~~~~~~~~~~~~~~---------~~~~~~-~~~~~ 165 (579)
T PRK09192 96 YAGLVPVPLPLPMGFGGRESYIAQLRGMLASAQPAAIITPDELLPWVNEATHGNPLLHV---------LSHAWF-KALPE 165 (579)
T ss_pred HcCCeeEeccCCcccccchHHHHHHHHHHHhcCCCEEEeChHHHHHHHHhhccccccce---------eehhhh-cccCC
Confidence 99999999986443 57899999999999999998776665544321111111 122222 11111
Q ss_pred CCCCcccCCCCCeEEEecCCCCCCCCceeeechHHHHHHHhhhhcCCCCCccCCCCcEEEEccchHHHHhhHHHHHHHHH
Q 014952 172 NEIPAVKINPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALR 251 (415)
Q Consensus 172 ~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~l~~l~ 251 (415)
.........++++++|+|||||||.||+|.++|+++.......... .+.+.++++++..+|++|.+++...++.++.
T Consensus 166 ~~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~---~~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~ 242 (579)
T PRK09192 166 ADVALPRPTPDDIAYLQYSSGSTRFPRGVIITHRALMANLRAISHD---GLKVRPGDRCVSWLPFYHDMGLVGFLLTPVA 242 (579)
T ss_pred CccccCCCCCCCeEEEEecCCCCCCCceEEeeHHHHHHHHHHHHhh---cccCCCCCeEEEeCCCCCcchhHHHHHHHHH
Confidence 1122233567899999999999999999999999999877665541 2357789999999999999998877788899
Q ss_pred cCcEEEEcCC----CCHHHHHHHHHhcCceeeecchHHHHHHHcCC---CCCCCCcccceeeeecCCCCCHHHHHHHHhh
Q 014952 252 VGAAILIMQK----FDIVKLMELVQKYKVTVAPFVPPIVLAVAKSG---DVDKYDMSSIRTVMSGAAPMGKELEDAVRAK 324 (415)
Q Consensus 252 ~G~~~v~~~~----~~~~~~~~~l~~~~~t~l~~~p~~l~~l~~~~---~~~~~~l~~lr~v~~gG~~l~~~~~~~~~~~ 324 (415)
.|+++++.+. .++..+++.+.+++++++...|..+..+.... .....+++++|.+.+||+++++++.+++.+.
T Consensus 243 ~g~~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~~~~~~l~~~~~~~~~~~~~~l~~lr~~~~gG~~l~~~~~~~~~~~ 322 (579)
T PRK09192 243 TQLSVDYLPTRDFARRPLQWLDLISRNRGTISYSPPFGYELCARRVNSKDLAELDLSCWRVAGIGADMIRPDVLHQFAEA 322 (579)
T ss_pred hCCeeEeeCHHHHHHCHHHHHHHHHhcCcEEEeCCcHHHHHHHHhhccccccccchhhhheeEecCccCCHHHHHHHHHH
Confidence 9999877652 36889999999999998776555554444322 1233568999999999999999999999988
Q ss_pred CCC-----CccccccccccCCccccccccccCC-----------------------ccccCCCcccccccCCeEEEEeCC
Q 014952 325 LPH-----AKLGQGYGMTEAGPVLSMCLAFAKE-----------------------PFEIKSGACGTVVRNAEMKIVDPD 376 (415)
Q Consensus 325 ~~~-----~~~~~~YG~tE~~~~~~~~~~~~~~-----------------------~~~~~~~~~G~p~~~~~v~i~d~~ 376 (415)
++. ..+++.||+||+++.++........ .......++|+|+|+++++|+| +
T Consensus 323 ~~~~g~~~~~~~~~yG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~p~~~v~i~d-~ 401 (579)
T PRK09192 323 FAPAGFDDKAFMPSYGLAEATLAVSFSPLGSGIVVEEVDRDRLEYQGKAVAPGAETRRVRTFVNCGKALPGHEIEIRN-E 401 (579)
T ss_pred HHhcCCChhhcccccccccceeEEeccCCCCCceEEEEcHHHhcCCceeeccCCCCccceeEeecCCcCCCcEEEEEC-C
Confidence 732 3589999999998655443110000 0001135789999999999999 5
Q ss_pred CCCCCCCCCceeEEEecCccccccccCCcceeeee
Q 014952 377 TGISLPRNQAGEICIRGAQIMKGTYHIYAPFLLSI 411 (415)
Q Consensus 377 ~~~~~~~g~~Gel~v~~~~~~~gY~~~~~~~~~~~ 411 (415)
+++.++.|+.|||+++|+.++.|||++ +.+...|
T Consensus 402 ~~~~~~~g~~Gel~i~g~~~~~gY~~~-~~~~~~~ 435 (579)
T PRK09192 402 AGMPLPERVVGHICVRGPSLMSGYFRD-EESQDVL 435 (579)
T ss_pred CCCCCCCCCEEEEEecCCchhhhhcCC-ccccccc
Confidence 589999999999999999999999999 5555443
No 108
>PRK08276 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=3.6e-43 Score=344.23 Aligned_cols=358 Identities=27% Similarity=0.403 Sum_probs=284.2
Q ss_pred EEEeCCCCCeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHHhCCeEeecCCCCCHHHHHHHHHh
Q 014952 43 CIINGPTGDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGATSTTANPFYTPPEIAKQAIA 122 (415)
Q Consensus 43 a~~~~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~ 122 (415)
|++..++++.+||.||.++++++|+.|.++|+++||+|+++++|+.+++++++||+++|++++|+++.++.+++..++.+
T Consensus 2 ~~~~~~~~~~~ty~el~~~v~~~a~~L~~~g~~~~~~V~i~~~~~~~~~~~~la~~~~G~~~~~l~~~~~~~~~~~~~~~ 81 (502)
T PRK08276 2 AVIMAPSGEVVTYGELEARSNRLAHGLRALGLREGDVVAILLENNPEFFEVYWAARRSGLYYTPINWHLTAAEIAYIVDD 81 (502)
T ss_pred ceEecCCCcEEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEeCCCHHHHHHHHHHHhcCcEEEecccccCHHHHHHHHhc
Confidence 44444458999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCceEEEEcccchHHHHhhhhhc--CceEEEeC-CCCCCccchhhhhhhcccCCCCcccCCCCCeEEEecCCCCCCCCce
Q 014952 123 SKAKIIITQAVYNDKVRDLSEHH--GARIVTID-PPPENCLHFSELITQADENEIPAVKINPDDVVALPYSSGTTGLPKG 199 (415)
Q Consensus 123 ~~~~~vl~~~~~~~~~~~~~~~~--~~~~i~~~-~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~ 199 (415)
.++++++++....+.+....... ....+.+. ........+++.... .. .......++.++++|||||||.||+
T Consensus 82 ~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~---~~~~~~~~~~a~i~~TSGtTG~PK~ 157 (502)
T PRK08276 82 SGAKVLIVSAALADTAAELAAELPAGVPLLLVVAGPVPGFRSYEEALAA-QP---DTPIADETAGADMLYSSGTTGRPKG 157 (502)
T ss_pred CCCCEEEEccchhhHHHHHhhhccccccEEEEeCCCCCccccHHHHHhc-CC---CCCCCCCCcceEEEECCCCCCCCce
Confidence 99999999988776665543322 23333332 222233344444221 11 1112345678999999999999999
Q ss_pred eeechHHHHHHHh--hhhcCCCCCccCCCCcEEEEccchHHHHhhHHHHHHHHHcCcEEEEcCCCCHHHHHHHHHhcCce
Q 014952 200 VMLTHKGLVTSVA--QQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIMQKFDIVKLMELVQKYKVT 277 (415)
Q Consensus 200 v~~t~~~l~~~~~--~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~l~~l~~G~~~v~~~~~~~~~~~~~l~~~~~t 277 (415)
|.++|.++..... ...............+++++..|++|.+++.. .+.++..|+++++.+.+++..+++.++++++|
T Consensus 158 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~t 236 (502)
T PRK08276 158 IKRPLPGLDPDEAPGMMLALLGFGMYGGPDSVYLSPAPLYHTAPLRF-GMSALALGGTVVVMEKFDAEEALALIERYRVT 236 (502)
T ss_pred EEEccCCcchhhhhHHhhhhhhhcccCCCCCEEEEcCcHHHHHHHHH-HHHHHhccceEEEcCCCCHHHHHHHHHHhCCe
Confidence 9998877653221 11111100112346788999999999999875 45789999999999889999999999999999
Q ss_pred eeecchHHHHHHHcCCC--CCCCCcccceeeeecCCCCCHHHHHHHHhhCCCCccccccccccCCccccccccccCCccc
Q 014952 278 VAPFVPPIVLAVAKSGD--VDKYDMSSIRTVMSGAAPMGKELEDAVRAKLPHAKLGQGYGMTEAGPVLSMCLAFAKEPFE 355 (415)
Q Consensus 278 ~l~~~p~~l~~l~~~~~--~~~~~l~~lr~v~~gG~~l~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~ 355 (415)
++.++|.++..+.+.+. .+..+++++|.+++||++++.++.+++.+.+ +..+++.||+||++++...+. ....
T Consensus 237 ~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~i~~~g~~~~~~~~~~~~~~~-~~~~~~~yG~tE~~~~~~~~~----~~~~ 311 (502)
T PRK08276 237 HSQLVPTMFVRMLKLPEEVRARYDVSSLRVAIHAAAPCPVEVKRAMIDWW-GPIIHEYYASSEGGGVTVITS----EDWL 311 (502)
T ss_pred EEEehHHHHHHHHhCccccCCCCCcccceEEEecCCCCCHHHHHHHHHHh-CcHhhhhcccccccceeEecC----cccc
Confidence 99999999999987653 2345689999999999999999999999998 788999999999997544331 1223
Q ss_pred cCCCcccccccCCeEEEEeCCCCCCCCCCCceeEEEecCccccccccCCcceeeeee
Q 014952 356 IKSGACGTVVRNAEMKIVDPDTGISLPRNQAGEICIRGAQIMKGTYHIYAPFLLSIV 412 (415)
Q Consensus 356 ~~~~~~G~p~~~~~v~i~d~~~~~~~~~g~~Gel~v~~~~~~~gY~~~~~~~~~~~~ 412 (415)
...+++|+|+ ++.++|+| +++++++.|+.|||+++|+.++.||+++|+.+...|.
T Consensus 312 ~~~~~~G~~~-~~~~~i~d-~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~ 366 (502)
T PRK08276 312 AHPGSVGKAV-LGEVRILD-EDGNELPPGEIGTVYFEMDGYPFEYHNDPEKTAAARN 366 (502)
T ss_pred ccCCCcceec-ccEEEEEC-CCCCCCcCCCceEEEEECCCccchhcCCHHHHHHHhc
Confidence 4557899999 88999999 5589999999999999999999999999988766553
No 109
>KOG1179 consensus Very long-chain acyl-CoA synthetase/fatty acid transporter [Lipid transport and metabolism]
Probab=100.00 E-value=2.2e-43 Score=320.77 Aligned_cols=377 Identities=20% Similarity=0.315 Sum_probs=307.7
Q ss_pred CCCCHHhHHHhhhccCCCCcEEEeCCCCCeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHHhCC
Q 014952 23 NHLPLHTYCFENISQFADRPCIINGPTGDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGA 102 (415)
Q Consensus 23 ~~~tl~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~ 102 (415)
+..|+++.+.++++++|+|+++++.+.++.+||+|+.+.++++|+.|..+|++.||.|++.|+|.++++.+.|+++++|+
T Consensus 75 ~~~ti~~~F~~~vrr~p~k~aii~~~~~~~~Tf~e~~~~s~~~A~~~~~~~l~~GD~VAL~men~pefv~lWlGLaKlGv 154 (649)
T KOG1179|consen 75 ERRTIAELFLSQVRRQPDKPAIIYEGPFQSLTFAELDARSNRVANYLHAEGLKAGDVVALLMENRPEFVALWLGLAKLGV 154 (649)
T ss_pred cCCcHHHHHHHHHHhCCCccEEEEeCCCceeeHHHHHHHHHHHHHHHHHhhcccCCEEEEecCCChhHHHHHHhHHhhCc
Confidence 46899999999999999999999997779999999999999999999999999999999999999999999999999999
Q ss_pred eEeecCCCCCHHHHHHHHHhcCceEEEEcccchHHHHhhhhhcC---ceEEEeCC--CCCCccchhhhhhhcccCCCC--
Q 014952 103 TSTTANPFYTPPEIAKQAIASKAKIIITQAVYNDKVRDLSEHHG---ARIVTIDP--PPENCLHFSELITQADENEIP-- 175 (415)
Q Consensus 103 ~~v~l~~~~~~~~~~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~---~~~i~~~~--~~~~~~~~~~l~~~~~~~~~~-- 175 (415)
+...||.+.-.+.+.+.+..++++.++++.+..+.+.++.+... +.....+. ...+..++...+........|
T Consensus 155 ~tA~iNtNlR~~~LlHsi~~s~aralv~~~el~~~~~e~~~~l~~~~i~~~~~~~~~~~~g~~~L~~~l~~~~~~~vp~~ 234 (649)
T KOG1179|consen 155 ITAFINTNLRGEPLLHSITVSGARALVVGPELLNALEEILPLLIKNGIHVFSLGPTSVPDGIESLLAKLSAAPKHPVPVS 234 (649)
T ss_pred eeeeeccccccchhhhhhhhcCceEEEECHHHHHHHHhcchhhhhccceEEecCCCCCCchHHHHHHhhcccccCCCCcc
Confidence 99999999999999999999999999999999888777744333 33444432 233344444443333333323
Q ss_pred -cccCCCCCeEEEecCCCCCCCCceeeechHHHHHHHhhhhcCCCCCccCCCCcEEEEccchHHHHhhHHHHHHHHHcCc
Q 014952 176 -AVKINPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGA 254 (415)
Q Consensus 176 -~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~l~~l~~G~ 254 (415)
.......++++.+|||||||-||..+++|.-.......... .++++++|+++..+|++|.++.+.++..++..|+
T Consensus 235 ~~~~~~~~s~~lyIYTSGTTGLPKaAvith~r~~~~a~g~~~----~~g~~~~DvvY~~lPLYHsaa~ilGi~~~l~~Ga 310 (649)
T KOG1179|consen 235 TRSGLTFRSPLLYIYTSGTTGLPKAAVITHLRYLQGAAGFYY----VFGMTADDVVYTTLPLYHSAAGILGIGGCLLHGA 310 (649)
T ss_pred cCCCccccceeEEEEcCCCCCCCHHHHHHHHHHHHHHHHHHH----HhCCCccceEEEcchhHHHHHHHHHHHHHHhcCc
Confidence 23455678899999999999999999999988877665555 5679999999999999999999999999999999
Q ss_pred EEEEcCCCCHHHHHHHHHhcCceeeecchHHHHHHHcCCCCCCCCcccceeeeecCCCCCHHHHHHHHhhCCCCcccccc
Q 014952 255 AILIMQKFDIVKLMELVQKYKVTVAPFVPPIVLAVAKSGDVDKYDMSSIRTVMSGAAPMGKELEDAVRAKLPHAKLGQGY 334 (415)
Q Consensus 255 ~~v~~~~~~~~~~~~~l~~~~~t~l~~~p~~l~~l~~~~~~~~~~l~~lr~v~~gG~~l~~~~~~~~~~~~~~~~~~~~Y 334 (415)
++++-.+|++.++|+...++++|++.-.-.+.+.|++.+......-..+|+.+ |.-+.++..+.|.++|+..++.+.|
T Consensus 311 T~VlrkKFSAS~FW~DC~k~~~Tv~QYIGElcRYLl~~p~~~~er~HkVRla~--GNGLR~diW~~Fv~RFg~~~IgE~Y 388 (649)
T KOG1179|consen 311 TVVLRKKFSASNFWDDCRKYNVTVIQYIGELCRYLLNQPPSPEERQHKVRLAY--GNGLRPDIWQQFVKRFGIIKIGEFY 388 (649)
T ss_pred eEEEecccchhhhHHHHHHhCCeeeehHHHHHHHHHcCCCChhhcCceEEEEe--cCCCCchHHHHHHHHcCCCeEEEEe
Confidence 99999999999999999999999999999999999999877766668888876 6668899999999999667799999
Q ss_pred ccccCCccccccccccCCccccCCCcccc------cccCCeEEEEeCCCCC----------CCCCCCceeEEEe--cCcc
Q 014952 335 GMTEAGPVLSMCLAFAKEPFEIKSGACGT------VVRNAEMKIVDPDTGI----------SLPRNQAGEICIR--GAQI 396 (415)
Q Consensus 335 G~tE~~~~~~~~~~~~~~~~~~~~~~~G~------p~~~~~v~i~d~~~~~----------~~~~g~~Gel~v~--~~~~ 396 (415)
|+||... ..++ .+.+.|.+|+ -+--+++-=+|+++++ +|++||.|.++-+ ...-
T Consensus 389 gaTEgn~-~~~N-------~d~~vGA~G~~~~~~~~l~p~~LIk~D~~t~E~iRd~~G~Ci~~~~GEpGlLv~~i~~k~P 460 (649)
T KOG1179|consen 389 GATEGNS-NLVN-------YDGRVGACGFMSRLLKLLYPFRLIKVDPETGEPIRDSQGLCIPCPPGEPGLLVGKIVQKNP 460 (649)
T ss_pred ccccCcc-eeee-------ecCccccccchhhhhhhccceEEEEecCCCCceeecCCceEEECCCCCCceEEEEeccCCc
Confidence 9999884 2223 2344455554 2222333335667775 4689999977533 3333
Q ss_pred ---ccccccCCcceeeeeee
Q 014952 397 ---MKGTYHIYAPFLLSIVC 413 (415)
Q Consensus 397 ---~~gY~~~~~~~~~~~~~ 413 (415)
|.||.++.+++++-.++
T Consensus 461 ~~~F~GY~g~~~~t~kKl~r 480 (649)
T KOG1179|consen 461 LRSFLGYAGPKKATEKKLLR 480 (649)
T ss_pred hhhhccccCchhhhhhhhHH
Confidence 88999988888765443
No 110
>PRK12406 long-chain-fatty-acid--CoA ligase; Provisional
Probab=100.00 E-value=8.6e-43 Score=342.09 Aligned_cols=350 Identities=26% Similarity=0.342 Sum_probs=279.2
Q ss_pred EEEeCCCCCeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHHhCCeEeecCCCCCHHHHHHHHHh
Q 014952 43 CIINGPTGDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGATSTTANPFYTPPEIAKQAIA 122 (415)
Q Consensus 43 a~~~~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~ 122 (415)
++++. ++.+||.||.++++++|++|.++|+++||+|+++++|+.+++++++||+++|++++++++.++.+++..+++.
T Consensus 4 ~~~~~--~~~~Ty~el~~~~~~la~~l~~~g~~~g~~V~v~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~ 81 (509)
T PRK12406 4 TIISG--DRRRSFDELAQRAARAAGGLAALGVRPGDCVALLMRNDFAFFEAAYAAMRLGAYAVPVNWHFKPEEIAYILED 81 (509)
T ss_pred EEEEC--CeeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCeEEEecCcccCHHHHHHHHhc
Confidence 56665 7899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCceEEEEcccchHHHHhhhhhcCceEEEeCCC----------------CCCccchhhhhhhcccCCCCcccCCCCCeEE
Q 014952 123 SKAKIIITQAVYNDKVRDLSEHHGARIVTIDPP----------------PENCLHFSELITQADENEIPAVKINPDDVVA 186 (415)
Q Consensus 123 ~~~~~vl~~~~~~~~~~~~~~~~~~~~i~~~~~----------------~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~ 186 (415)
+++++++++....+.+...... ...++..+.. ......+++++. .. .+......+++++
T Consensus 82 ~~~~~i~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~---~~~~~~~~~~~a~ 156 (509)
T PRK12406 82 SGARVLIAHADLLHGLASALPA-GVTVLSVPTPPEIAAAYRISPALLTPPAGAIDWEGWLA-QQ---EPYDGPPVPQPQS 156 (509)
T ss_pred cCCcEEEEccchhhhhhhhhhc-ccceeecccccccccccccccccccCCCCccCHHHHhc-cc---CccCCCCCCCceE
Confidence 9999999988766654432211 1222222211 112233444311 11 1122345689999
Q ss_pred EecCCCCCCCCceeeechHHHHHH---HhhhhcCCCCCccCCCCcEEEEccchHHHHhhHHHHHHHHHcCcEEEEcCCCC
Q 014952 187 LPYSSGTTGLPKGVMLTHKGLVTS---VAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIMQKFD 263 (415)
Q Consensus 187 i~~TSGtTG~pK~v~~t~~~l~~~---~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~l~~l~~G~~~v~~~~~~ 263 (415)
++|||||||.||+|.++|...... ...... .+.+.++++++...|++|..+... .+.++..|+++++.+.++
T Consensus 157 i~~TSGtTG~PK~v~~s~~~~~~~~~~~~~~~~----~~~~~~~~~~l~~~p~~~~~~~~~-~~~~~~~g~~~~~~~~~~ 231 (509)
T PRK12406 157 MIYTSGTTGHPKGVRRAAPTPEQAAAAEQMRAL----IYGLKPGIRALLTGPLYHSAPNAY-GLRAGRLGGVLVLQPRFD 231 (509)
T ss_pred EEECCCCCCCCceEEEechhHHHHHHHHHhhhh----hcCCCCCceEEEEeCCcccchHHH-HHHHHhhheEEEEccCCC
Confidence 999999999999999877654332 222222 445788999999999999888764 455688999999988889
Q ss_pred HHHHHHHHHhcCceeeecchHHHHHHHcCCC--CCCCCcccceeeeecCCCCCHHHHHHHHhhCCCCccccccccccCCc
Q 014952 264 IVKLMELVQKYKVTVAPFVPPIVLAVAKSGD--VDKYDMSSIRTVMSGAAPMGKELEDAVRAKLPHAKLGQGYGMTEAGP 341 (415)
Q Consensus 264 ~~~~~~~l~~~~~t~l~~~p~~l~~l~~~~~--~~~~~l~~lr~v~~gG~~l~~~~~~~~~~~~~~~~~~~~YG~tE~~~ 341 (415)
+..+++.++++++|++.++|+++..+++... ....+++++|.++.||+++++++.+++.+.+ ++.+++.||+||++.
T Consensus 232 ~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~l~~v~~gg~~~~~~~~~~~~~~~-~~~~~~~YG~tE~~~ 310 (509)
T PRK12406 232 PEELLQLIERHRITHMHMVPTMFIRLLKLPEEVRAKYDVSSLRHVIHAAAPCPADVKRAMIEWW-GPVIYEYYGSTESGA 310 (509)
T ss_pred HHHHHHHHHHcCCeEEEccHHHHHHHHhCchhhcccCCCCceeEEEEcCCCCCHHHHHHHHHHc-CCcEEeeccccccCc
Confidence 9999999999999999999999999887543 2345678999999999999999999999998 788999999999997
Q ss_pred cccccccccCCccccCCCcccccccCCeEEEEeCCCCCCCCCCCceeEEEecCcccc-ccccCCcceeee
Q 014952 342 VLSMCLAFAKEPFEIKSGACGTVVRNAEMKIVDPDTGISLPRNQAGEICIRGAQIMK-GTYHIYAPFLLS 410 (415)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~G~p~~~~~v~i~d~~~~~~~~~g~~Gel~v~~~~~~~-gY~~~~~~~~~~ 410 (415)
+...+ .......++++|+|+++++++|+| +++++++.|+.|||+++|+.++. ||+++|+.+...
T Consensus 311 ~~~~~----~~~~~~~~~~~G~~~~~~~~~i~d-~~~~~~~~g~~Gel~v~~~~~~~~~y~~~~~~~~~~ 375 (509)
T PRK12406 311 VTFAT----SEDALSHPGTVGKAAPGAELRFVD-EDGRPLPQGEIGEIYSRIAGNPDFTYHNKPEKRAEI 375 (509)
T ss_pred eEecC----cccccccCCCcCccCCCcEEEEEC-CCCCCCCCCCceEEEEECCccccccccCCchhcccc
Confidence 54332 122234567899999999999999 55899999999999999999875 999998876543
No 111
>PRK07768 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=1.3e-42 Score=343.67 Aligned_cols=362 Identities=22% Similarity=0.301 Sum_probs=284.4
Q ss_pred CHHhHHHhhhccCCCCcEEEeCCCCCeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHHhCCeEe
Q 014952 26 PLHTYCFENISQFADRPCIINGPTGDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGATST 105 (415)
Q Consensus 26 tl~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v 105 (415)
++.+.|...+...|+++++.+.+..+.+||.||.++++++|++|.+.|+++||+|+++++|+.+++++++||+++|++++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ty~el~~~v~~~a~~L~~~g~~~gd~V~l~~~~~~~~~~~~la~~~~g~v~~ 82 (545)
T PRK07768 3 RFTEKMYANARTSPRGMVTGEPDAPVRHTWGEVHERARRIAGGLAAAGVGPGDAVAVLAGAPVEIAPTAQGLWMRGASLT 82 (545)
T ss_pred hHHHHHHHHhhCCCcceEEecCCCceEecHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCchHHHHHHHHHHHcCcccc
Confidence 57888999999999999998887678999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCCCCHHHH-------HHHHHhcCceEEEEcccchHHHHhhhhhcCceEEEeCCCCCCccchhhhhhhcccCCCCccc
Q 014952 106 TANPFYTPPEI-------AKQAIASKAKIIITQAVYNDKVRDLSEHHGARIVTIDPPPENCLHFSELITQADENEIPAVK 178 (415)
Q Consensus 106 ~l~~~~~~~~~-------~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 178 (415)
++++..+.+++ ..+++.++++.+++++.......... .....+ ..++++.... . .....
T Consensus 83 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~-~~~~~~----------~~~~~l~~~~-~--~~~~~ 148 (545)
T PRK07768 83 MLHQPTPRTDLAVWAEDTLRVIGMIGAKAVVVGEPFLAAAPVLE-EKGIRV----------LTVADLLAAD-P--IDPVE 148 (545)
T ss_pred ccCCCCCcchhHHHHHHHHHHHHhCCCCEEEecchhhhhhhhhc-ccCCce----------eehhhhcccC-C--CCcCC
Confidence 99988776544 44677789999999876544333221 111222 2333442211 1 12234
Q ss_pred CCCCCeEEEecCCCCCCCCceeeechHHHHHHHhhhhcCCCCCccCCCC-cEEEEccchHHHHhhHHHHHHHHHcCcEEE
Q 014952 179 INPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKE-DVILCVLPLFHIYSLNSVLLCALRVGAAIL 257 (415)
Q Consensus 179 ~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~pl~~~~g~~~~~l~~l~~G~~~v 257 (415)
..++++++|+|||||||.||+|.++|+++......... .+++.++ +++++.+|++|..++...++.++..|++++
T Consensus 149 ~~~~~~a~i~~TSGtTG~PKgv~~s~~~~~~~~~~~~~----~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~~v 224 (545)
T PRK07768 149 TGEDDLALMQLTSGSTGSPKAVQITHGNLYANAEAMFV----AAEFDVETDVMVSWLPLFHDMGMVGFLTVPMYFGAELV 224 (545)
T ss_pred CCCCCEEEEEeCCCCCCCCceEEEcHHHHHHHHHHHHH----hcCCCCCCceeEEeCCCccchHHHHHHHHHHHCCceEE
Confidence 56789999999999999999999999999888776665 3345665 899999999999998866778899999998
Q ss_pred EcCC----CCHHHHHHHHHhcCceeeecchHHHHHHHcC----CCCCCCCcccceeeeecCCCCCHHHHHHHHhh---C-
Q 014952 258 IMQK----FDIVKLMELVQKYKVTVAPFVPPIVLAVAKS----GDVDKYDMSSIRTVMSGAAPMGKELEDAVRAK---L- 325 (415)
Q Consensus 258 ~~~~----~~~~~~~~~l~~~~~t~l~~~p~~l~~l~~~----~~~~~~~l~~lr~v~~gG~~l~~~~~~~~~~~---~- 325 (415)
+.++ .++..+.+.+++++++++..+|..+..+.+. ......+++++|.++++|+++++++.+++.+. +
T Consensus 225 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~lr~~~~~g~~~~~~~~~~~~~~~~~~g 304 (545)
T PRK07768 225 KVTPMDFLRDPLLWAELISKYRGTMTAAPNFAYALLARRLRRQAKPGAFDLSSLRFALNGAEPIDPADVEDLLDAGARFG 304 (545)
T ss_pred EeCHHHHHHhHHHHHHHHHHhCCEEEECchHHHHHHHHHHhccccccCCCchheeeEEeccCCCCHHHHHHHHHHHHhcC
Confidence 8764 2678889999999999987777766655432 12224678899999999999999999999874 4
Q ss_pred -CCCccccccccccCCccccccccccC---------------------CccccCCCcccccccCCeEEEEeCCCCCCCCC
Q 014952 326 -PHAKLGQGYGMTEAGPVLSMCLAFAK---------------------EPFEIKSGACGTVVRNAEMKIVDPDTGISLPR 383 (415)
Q Consensus 326 -~~~~~~~~YG~tE~~~~~~~~~~~~~---------------------~~~~~~~~~~G~p~~~~~v~i~d~~~~~~~~~ 383 (415)
+...+++.||+||++..++....... .......+++|+|+++++++|+| +++++++.
T Consensus 305 ~~~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~g~~~~i~~-~~~~~~~~ 383 (545)
T PRK07768 305 LRPEAILPAYGMAEATLAVSFSPCGAGLVVDEVDADLLAALRRAVPATKGNTRRLATLGPPLPGLEVRVVD-EDGQVLPP 383 (545)
T ss_pred CCcccccccccccccceEEEccCCCCCcceeeechhHhhccCceeccCCCCcceEEeccCCCCCCEEEEEC-CCCCCCCC
Confidence 12359999999999865443211000 00122346899999999999999 66899999
Q ss_pred CCceeEEEecCccccccccCCcc
Q 014952 384 NQAGEICIRGAQIMKGTYHIYAP 406 (415)
Q Consensus 384 g~~Gel~v~~~~~~~gY~~~~~~ 406 (415)
|+.|||+++|+.++.||+++++.
T Consensus 384 g~~Gel~v~~~~~~~gy~~~~~~ 406 (545)
T PRK07768 384 RGVGVIELRGESVTPGYLTMDGF 406 (545)
T ss_pred CCEEEEEEccCcccccccCCCCC
Confidence 99999999999999999986543
No 112
>PRK07868 acyl-CoA synthetase; Validated
Probab=100.00 E-value=5.7e-42 Score=356.55 Aligned_cols=350 Identities=21% Similarity=0.276 Sum_probs=272.0
Q ss_pred CCCCCHHhHHHhhhccCCCCcEEEeCCCCCeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHHhC
Q 014952 22 PNHLPLHTYCFENISQFADRPCIINGPTGDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIG 101 (415)
Q Consensus 22 ~~~~tl~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G 101 (415)
+.++|+.+.|.+.++++|+++|+++. ++.+||+||.++++++|+.|+++|+++||+|+|+++|+++++++++||+++|
T Consensus 444 ~~~~sl~~ll~~~a~~~pd~~Al~~~--~~~lTY~eL~~ra~rlA~~L~~~Gv~~Gd~VaI~~~n~~e~v~a~lA~~~aG 521 (994)
T PRK07868 444 HTRISLGRIIAEQARDAPKGEFLLFD--GRVHTYEAVNRRINNVVRGLIAVGVRQGDRVGVLMETRPSALVAIAALSRLG 521 (994)
T ss_pred CCCccHHHHHHHHHHHCCCCeEEEeC--CceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHhcC
Confidence 55789999999999999999999986 7899999999999999999999999999999999999999999999999999
Q ss_pred CeEeecCCCCCHHHHHHHHHhcCceEEEEcccchHHHHhhhhhcCceEEEeCCCCCC---------ccchhhhhhhcccC
Q 014952 102 ATSTTANPFYTPPEIAKQAIASKAKIIITQAVYNDKVRDLSEHHGARIVTIDPPPEN---------CLHFSELITQADEN 172 (415)
Q Consensus 102 ~~~v~l~~~~~~~~~~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~i~~~~~~~~---------~~~~~~l~~~~~~~ 172 (415)
++++|++|. +++.+++++++++++|++.+..+.+... ..++++++..... ...++++ ... ..
T Consensus 522 av~vpl~p~---~~l~~il~~s~~~~li~~~~~~~~~~~~----~~~iiv~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~ 592 (994)
T PRK07868 522 AVAVLMPPD---TDLAAAVRLGGVTEIITDPTNLEAARQL----PGRVLVLGGGESRDLDLPDDADVIDMEKI-DPD-AV 592 (994)
T ss_pred CEEEEeCCc---hhHHHHHhccCCeEEEEChHHHHHHHhc----CceEEEecCCccccccCCcchhhhhhhhc-Ccc-cc
Confidence 999999985 6789999999999999987766554332 3455555431110 0111111 000 00
Q ss_pred CCC----cccCCCCCeEEEecCCCCCCCCceeeechHHHHHHHhhhhcCCCCCccCCCCcEEEEccchHHHHhhHHHHHH
Q 014952 173 EIP----AVKINPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLC 248 (415)
Q Consensus 173 ~~~----~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~l~ 248 (415)
..+ .....++++++|+|| ||||.||++.++|.+.......... .+.+.++|++++.+|++|.+++...++.
T Consensus 593 ~~~~~~~~~~~~~dd~a~IiyT-gStgtpKpk~vt~~~~~~~~~~~~~----~~~l~~~d~~L~~~Pl~h~~gl~~~l~~ 667 (994)
T PRK07868 593 ELPGWYRPNPGLARDLAFIAFS-TAGGELVAKQITNYRWALSAFGTAS----AAALDRRDTVYCLTPLHHESGLLVSLGG 667 (994)
T ss_pred cCCcccCCCCCCCCccEEEEEe-CCCCCcCcEEEehHHHHHHHHhhhh----hcCCCCCCeEEEecChHHHhHHHHHHHH
Confidence 001 112235889999998 5777777777787766544333333 3457889999999999999999865666
Q ss_pred HHHcCcEEEEcCCCCHHHHHHHHHhcCceeeecchHHHHHHHcCCCCCCCCcccceeeeecCCCCCHHHHHHHHhhCCCC
Q 014952 249 ALRVGAAILIMQKFDIVKLMELVQKYKVTVAPFVPPIVLAVAKSGDVDKYDMSSIRTVMSGAAPMGKELEDAVRAKLPHA 328 (415)
Q Consensus 249 ~l~~G~~~v~~~~~~~~~~~~~l~~~~~t~l~~~p~~l~~l~~~~~~~~~~l~~lr~v~~gG~~l~~~~~~~~~~~~~~~ 328 (415)
.+..|+++++.+.++++.+++.|+++++|++.++|+++..|++.......+++++|.++ | +.+++++.+++.+.|+++
T Consensus 668 ~l~gG~~vvl~~~~~~~~~~~~I~~~~vT~~~~~Ps~l~~L~~~~~~~~~~~~slr~~~-g-~gl~~~l~~~~~~~~~~~ 745 (994)
T PRK07868 668 AVVGGSRIALSRGLDPDRFVQEVRQYGVTVVSYTWAMLREVVDDPAFVLHGNHPVRLFI-G-SGMPTGLWERVVEAFAPA 745 (994)
T ss_pred HhccceEEEecCCCCHHHHHHHHHHhCCcEEEeHHHHHHHHHhCcCCccCCCCceEEEe-c-CCCCHHHHHHHHHHhCch
Confidence 67777777777789999999999999999999999999999887554445678999876 3 349999999999999778
Q ss_pred ccccccccccCCccccccccccCCccccCCCcccccccCC-eEEEE--eC--------CCC--CCCCCCCceeEEEecCc
Q 014952 329 KLGQGYGMTEAGPVLSMCLAFAKEPFEIKSGACGTVVRNA-EMKIV--DP--------DTG--ISLPRNQAGEICIRGAQ 395 (415)
Q Consensus 329 ~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~G~p~~~~-~v~i~--d~--------~~~--~~~~~g~~Gel~v~~~~ 395 (415)
++++.||+||++.... . . ...+.+++|+|+|++ +++|. |+ ++| +.++.|+.|||+++|+.
T Consensus 746 ~l~~~YG~TE~~~~~~-~-----~-~~~~~~svG~p~pg~~~v~i~~~d~~~g~li~d~~G~~~~~~~ge~Gel~~~~~~ 818 (994)
T PRK07868 746 HVVEFFATTDGQAVLA-N-----V-SGAKIGSKGRPLPGAGRVELAAYDPEHDLILEDDRGFVRRAEVNEVGVLLARARG 818 (994)
T ss_pred heeeeeeccccccccc-c-----c-CCCCCcccCCccCCCCceeEEEecCcCCceeecCCceEEEcCCCCceEEEEecCC
Confidence 9999999999874322 1 1 124567899999998 77764 21 335 56889999999999985
Q ss_pred c
Q 014952 396 I 396 (415)
Q Consensus 396 ~ 396 (415)
.
T Consensus 819 ~ 819 (994)
T PRK07868 819 P 819 (994)
T ss_pred C
Confidence 3
No 113
>PRK09029 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=100.00 E-value=9e-42 Score=330.39 Aligned_cols=322 Identities=22% Similarity=0.302 Sum_probs=265.2
Q ss_pred HHhHH-HhhhccCCCCcEEEeCCCCCeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHHhCCeEe
Q 014952 27 LHTYC-FENISQFADRPCIINGPTGDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGATST 105 (415)
Q Consensus 27 l~~~l-~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v 105 (415)
+.+.+ ..+++++|+++|+++. ++.+||.||.++++++|+.|.+.|+++||+|+++++|+.+++++++||+++|++++
T Consensus 4 ~~~~~~~~~a~~~~~~~a~~~~--~~~~ty~el~~~~~~~a~~L~~~g~~~~~~v~l~~~~~~~~~~~~la~~~~G~~~v 81 (458)
T PRK09029 4 FSDWPWRHWAQVRPQAIALRLN--DEVLTWQQLCARIDQLAAGFAQQGVVEGSGVALRGKNSPETLLAYLALLQCGARVL 81 (458)
T ss_pred hhcChHHHHHHhCCCceeeecC--CcceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEecCCCHHHHHHHHHHHHcCCEEe
Confidence 33444 5568899999999976 88999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHHHHHhcCceEEEEcccchHHHHhhhhhcCceEEEeCCCCCCccchhhhhhhcccCCCCcccCCCCCeE
Q 014952 106 TANPFYTPPEIAKQAIASKAKIIITQAVYNDKVRDLSEHHGARIVTIDPPPENCLHFSELITQADENEIPAVKINPDDVV 185 (415)
Q Consensus 106 ~l~~~~~~~~~~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a 185 (415)
|+++..+.+++..++.++++.+++++++... +... ..... .. ..........+++++
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~------~~~~~---------------~~-~~~~~~~~~~~~~~a 138 (458)
T PRK09029 82 PLNPQLPQPLLEELLPSLTLDFALVLEGENT-FSAL------TSLHL---------------QL-VEGAHAVAWQPQRLA 138 (458)
T ss_pred ecCCCCCHHHHHHHHHhcCCCEEEEcCcccc-hhhc------ccccc---------------cc-ccccCcccCCCCCeE
Confidence 9999999999999999999999999876532 1110 00000 00 001112344678899
Q ss_pred EEecCCCCCCCCceeeechHHHHHHHhhhhcCCCCCccCCCCcEEEEccchHHHHhhHHHHHHHHHcCcEEEEcCCCCHH
Q 014952 186 ALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIMQKFDIV 265 (415)
Q Consensus 186 ~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~l~~l~~G~~~v~~~~~~~~ 265 (415)
+++|||||||.||+|.++|+++......... .+.+.++++++..+|++|.+++. .++.++..|+++++.+. .
T Consensus 139 ~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~----~~~~~~~~~~l~~~p~~h~~g~~-~~~~~l~~G~~v~~~~~---~ 210 (458)
T PRK09029 139 TMTLTSGSTGLPKAAVHTAQAHLASAEGVLS----LMPFTAQDSWLLSLPLFHVSGQG-IVWRWLYAGATLVVRDK---Q 210 (458)
T ss_pred EEEECCCCCCCCCEEEEeHHHHHHHHHHHhh----cCCCCccceEEEecCcHhhhhhH-HHHHHHhCCceEEeCCh---H
Confidence 9999999999999999999999998887766 45678899999999999999986 56778999999998764 4
Q ss_pred HHHHHHHhcCceeeecchHHHHHHHcCCCCCCCCcccceeeeecCCCCCHHHHHHHHhhCCCCccccccccccCCccccc
Q 014952 266 KLMELVQKYKVTVAPFVPPIVLAVAKSGDVDKYDMSSIRTVMSGAAPMGKELEDAVRAKLPHAKLGQGYGMTEAGPVLSM 345 (415)
Q Consensus 266 ~~~~~l~~~~~t~l~~~p~~l~~l~~~~~~~~~~l~~lr~v~~gG~~l~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~ 345 (415)
.+.+.+ .+++.+..+|.++..+...... ..++|.+++||++++.++.+++.+. +.++++.||+||++.....
T Consensus 211 ~~~~~i--~~~t~~~~~P~~~~~l~~~~~~----~~~l~~i~~gG~~~~~~~~~~~~~~--g~~~~~~YG~tE~~~~~~~ 282 (458)
T PRK09029 211 PLEQAL--AGCTHASLVPTQLWRLLDNRSE----PLSLKAVLLGGAAIPVELTEQAEQQ--GIRCWCGYGLTEMASTVCA 282 (458)
T ss_pred HHHHHH--hhceeeecChHHHHHHHhcccc----CCcceEEEECCCCCCHHHHHHHHHc--CCcEeccccccccCcceec
Confidence 566666 3789999999999988876432 3479999999999999999998864 8999999999999864332
Q ss_pred cccccCCccccCCCcccccccCCeEEEEeCCCCCCCCCCCceeEEEecCccccccccCCccee
Q 014952 346 CLAFAKEPFEIKSGACGTVVRNAEMKIVDPDTGISLPRNQAGEICIRGAQIMKGTYHIYAPFL 408 (415)
Q Consensus 346 ~~~~~~~~~~~~~~~~G~p~~~~~v~i~d~~~~~~~~~g~~Gel~v~~~~~~~gY~~~~~~~~ 408 (415)
. ......++|+|+++++++|+| |||+++|+.++.||+++++.+.
T Consensus 283 ~-------~~~~~~~~G~~~~~~~~~i~~------------gel~v~g~~~~~gY~~~~~~~~ 326 (458)
T PRK09029 283 K-------RADGLAGVGSPLPGREVKLVD------------GEIWLRGASLALGYWRQGQLVP 326 (458)
T ss_pred c-------CCCCCCCCCCCCCCCEEEEeC------------CEEEEecCceeeeeecCccccc
Confidence 2 112235699999999999987 8999999999999999987653
No 114
>PRK07445 O-succinylbenzoic acid--CoA ligase; Reviewed
Probab=100.00 E-value=4.2e-41 Score=323.68 Aligned_cols=300 Identities=22% Similarity=0.264 Sum_probs=240.9
Q ss_pred eeHHHHHHHHHHHHHHHHHcCC-CCCCEEEEEcCCchhHHHHHHHHHHhCCeEeecCCCCCHHHHHHHHHhcCceEEEEc
Q 014952 53 YTYADVELTSRKVAAGLSKLGV-QKGDVIMLLLQNCPQFVFAFLGASYIGATSTTANPFYTPPEIAKQAIASKAKIIITQ 131 (415)
Q Consensus 53 ~Ty~el~~~~~~~a~~L~~~g~-~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~vl~~ 131 (415)
+.|+||.++++++|++|++.|+ ++|++|+++++|+++++++++||+++|++++|++|.++.+++.++++++++++++++
T Consensus 20 ~~~~el~~~~~~~a~~L~~~g~~~~~~~V~i~~~n~~e~~~~~~A~~~~G~~~vpl~~~~~~~~~~~~~~~~~~~~~i~~ 99 (452)
T PRK07445 20 YNSQRFYQLAQQLYLQLQQLATPRTPPKILLAESDPLQFLAAFLAAVAAGCPVFLANPHWGQQEWQQVLNLVQPDQIWGL 99 (452)
T ss_pred cChHHHHHHHHHHHHHHHHhcCCCCCCeEEEecCCCHHHHHHHHHHHHhCcEEEeeccCCCHHHHHHHHHhcCCCEEEec
Confidence 5799999999999999999988 579999999999999999999999999999999999999999999999999999987
Q ss_pred ccchHHHHhhhhhcCceEEEeCCCCCCccchhhhhhhcccCCCCcccCCCCCeEEEecCCCCCCCCceeeechHHHHHHH
Q 014952 132 AVYNDKVRDLSEHHGARIVTIDPPPENCLHFSELITQADENEIPAVKINPDDVVALPYSSGTTGLPKGVMLTHKGLVTSV 211 (415)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~ 211 (415)
.+..... .+ .. . .......+++.++++|||||||.||+|.+||+++....
T Consensus 100 ~~~~~~~-------------~~----------~~--~-----~~~~~~~~~~~~~i~~TSGTTG~PKgV~~t~~~l~~~~ 149 (452)
T PRK07445 100 DQLKLSH-------------PP----------PL--P-----SQGILPNLETGWIMIPTGGSSGQIRFAIHTWETLTASV 149 (452)
T ss_pred Ccccccc-------------CC----------CC--C-----ccccCCCCCCcEEEEeCCCCCCCCcEEEechHHHHHHH
Confidence 6532110 00 00 0 00112346899999999999999999999999998877
Q ss_pred hhhhcCCCCCccCCCCcEEEEccchHHHHhhHHHHHHHHHcCcEEEEcCCCCHHHHHHHHHhcCceeeecchHHHHHHHc
Q 014952 212 AQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIMQKFDIVKLMELVQKYKVTVAPFVPPIVLAVAK 291 (415)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~l~~l~~G~~~v~~~~~~~~~~~~~l~~~~~t~l~~~p~~l~~l~~ 291 (415)
...... +.+.+ ++.++.+|++|.+|+. .++.++..|+++++.+............+++++++.++|.++..+.+
T Consensus 150 ~~~~~~----~~~~~-~~~~~~~Pl~h~~g~~-~~~~~l~~G~t~v~~~~~~~~~~~~~~~~~~~t~~~~vP~~l~~l~~ 223 (452)
T PRK07445 150 QGFQRY----FQLQQ-VNSFCVLPLYHVSGLM-QFMRSFLTGGKLVILPYKRLKSGQELPPNPSDFFLSLVPTQLQRLLQ 223 (452)
T ss_pred HHHHHH----hcCCC-CceEeccCchhhhhHH-HHHHHHHcCCeEEEcChHhccchhhhhhhcCceEEEehHHHHHHHHh
Confidence 766652 23443 4678899999999987 57889999999999874322322334457889999999999999886
Q ss_pred CCCCCCCCcccceeeeecCCCCCHHHHHHHHhhCCCCccccccccccCCccccccccccCCccccCCCcccccccCCeEE
Q 014952 292 SGDVDKYDMSSIRTVMSGAAPMGKELEDAVRAKLPHAKLGQGYGMTEAGPVLSMCLAFAKEPFEIKSGACGTVVRNAEMK 371 (415)
Q Consensus 292 ~~~~~~~~l~~lr~v~~gG~~l~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~G~p~~~~~v~ 371 (415)
.. ...++++|.+++||+++++++.+++.+ + +.++++.||+||++..+... .........+++|+|+|+++++
T Consensus 224 ~~---~~~l~~l~~i~~gG~~l~~~~~~~~~~-~-~~~l~~~YG~TE~~~~~~~~---~~~~~~~~~~~~G~~~p~~~v~ 295 (452)
T PRK07445 224 LR---PQWLAQFRTILLGGAPAWPSLLEQARQ-L-QLRLAPTYGMTETASQIATL---KPDDFLAGNNSSGQVLPHAQIT 295 (452)
T ss_pred hC---hhhhhcceEEEECCccCCHHHHHHHHh-c-CCeEecCcchhhhccccccc---CchhhccCCCcCCccCCCCeEE
Confidence 32 334789999999999999999998876 4 88999999999998644332 1111123457899999999999
Q ss_pred EEeCCCCCCCCCCCceeEEEecCccccccccCCc
Q 014952 372 IVDPDTGISLPRNQAGEICIRGAQIMKGTYHIYA 405 (415)
Q Consensus 372 i~d~~~~~~~~~g~~Gel~v~~~~~~~gY~~~~~ 405 (415)
|+ .|+.|||+|+||.++.||++++.
T Consensus 296 i~---------~g~~Gel~v~g~~~~~gY~~~~~ 320 (452)
T PRK07445 296 IP---------ANQTGNITIQAQSLALGYYPQIL 320 (452)
T ss_pred Ec---------CCCcceEEEeCCccchhhcCCcc
Confidence 98 26679999999999999998764
No 115
>TIGR01923 menE O-succinylbenzoate-CoA ligase. This model represents an enzyme, O-succinylbenzoate-CoA ligase, which is involved in the fourth step of the menaquinone biosynthesis pathway. O-succinylbenzoate-CoA ligase, together with menB - naphtoate synthase, take 2-succinylbenzoate and convert it into 1,4-di-hydroxy-2- naphtoate.
Probab=100.00 E-value=1.4e-40 Score=320.41 Aligned_cols=316 Identities=24% Similarity=0.338 Sum_probs=256.8
Q ss_pred eHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHHhCCeEeecCCCCCHHHHHHHHHhcCceEEEEccc
Q 014952 54 TYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGATSTTANPFYTPPEIAKQAIASKAKIIITQAV 133 (415)
Q Consensus 54 Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~vl~~~~ 133 (415)
||+||.++++++|+.|+++|+++||+|+++++|+.+++++++||+++|++++|+++.++.+++..++.+.+++++++++.
T Consensus 1 Ty~~l~~~~~~~a~~l~~~g~~~gd~v~i~~~~~~~~~~~~la~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 80 (436)
T TIGR01923 1 TWQDLDCEAAHLAKALKAQGIRSGSRVALVGQNSIEMVLLLHACLLLGAEIAMLNTRLTENERTNQLEDLDVQLLLTDSL 80 (436)
T ss_pred CHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHHHHHHHHHhcCcEEEecCcCCCHHHHHHHHHhcCCCEEEEcCc
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999876
Q ss_pred chHHHHhhhhhcCceEEEeCCCCCCccchhhhhhhcccCCCCcccCCCCCeEEEecCCCCCCCCceeeechHHHHHHHhh
Q 014952 134 YNDKVRDLSEHHGARIVTIDPPPENCLHFSELITQADENEIPAVKINPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQ 213 (415)
Q Consensus 134 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~ 213 (415)
..... ... ..++++................+++++++|||||||.||+|.++|.++......
T Consensus 81 ~~~~~--------~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~PK~v~~s~~~~~~~~~~ 142 (436)
T TIGR01923 81 LEEKD--------FQA----------DSLDRIEAAGRYETSLSASFNMDQIATLMFTSGTTGKPKAVPHTFRNHYASAVG 142 (436)
T ss_pred ccccc--------eee----------cchHhhhhcccccccccccCCcCceEEEEeCCCCCCCCcEEEEehHHHHHHHHH
Confidence 32110 000 011111011111111123345688999999999999999999999999988877
Q ss_pred hhcCCCCCccCCCCcEEEEccchHHHHhhHHHHHHHHHcCcEEEEcCCCCHHHHHHHHHhcCceeeecchHHHHHHHcCC
Q 014952 214 QVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIMQKFDIVKLMELVQKYKVTVAPFVPPIVLAVAKSG 293 (415)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~l~~l~~G~~~v~~~~~~~~~~~~~l~~~~~t~l~~~p~~l~~l~~~~ 293 (415)
... .++..++++++...|++|..++. .++.++..|+++++.+.+ ..+++.++++++|++.++|+++..+++..
T Consensus 143 ~~~----~~~~~~~d~~~~~~~~~~~~~~~-~~~~~l~~g~~~~~~~~~--~~~~~~l~~~~~t~~~~~P~~l~~l~~~~ 215 (436)
T TIGR01923 143 SKE----NLGFTEDDNWLLSLPLYHISGLS-ILFRWLIEGATLRIVDKF--NQLLEMIANERVTHISLVPTQLNRLLDEG 215 (436)
T ss_pred HHh----hcCCCCCceEEEccCcHhHHHHH-HHHHHHhcCceEEecchH--HHHHHHHHHhCCeEEEeHHHHHHHHHhCc
Confidence 776 45688899999999999999986 588999999999998765 38999999999999999999999998875
Q ss_pred CCCCCCcccceeeeecCCCCCHHHHHHHHhhCCCCccccccccccCCccccccccccCCccccCCCcccccccCCeEEEE
Q 014952 294 DVDKYDMSSIRTVMSGAAPMGKELEDAVRAKLPHAKLGQGYGMTEAGPVLSMCLAFAKEPFEIKSGACGTVVRNAEMKIV 373 (415)
Q Consensus 294 ~~~~~~l~~lr~v~~gG~~l~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~G~p~~~~~v~i~ 373 (415)
... +++|.+++||+++++++.+++++. +..+++.||+||+++...... ........++|+|+++++++|.
T Consensus 216 ~~~----~~l~~~~~~G~~~~~~~~~~~~~~--~~~~~~~YG~tE~~~~~~~~~----~~~~~~~~~~G~~~~~~~~~i~ 285 (436)
T TIGR01923 216 GHN----ENLRKILLGGSAIPAPLIEEAQQY--GLPIYLSYGMTETCSQVTTAT----PEMLHARPDVGRPLAGREIKIK 285 (436)
T ss_pred CCC----CceEEEEECCCCCCHHHHHHHHHh--CCceeeEecCCccchhccCcC----ccccccccCCCccCCCcEEEEE
Confidence 322 789999999999999999998764 899999999999986544331 1111112248999999999994
Q ss_pred eCCCCCCCCCCCceeEEEecCccccccccCCcceeee
Q 014952 374 DPDTGISLPRNQAGEICIRGAQIMKGTYHIYAPFLLS 410 (415)
Q Consensus 374 d~~~~~~~~~g~~Gel~v~~~~~~~gY~~~~~~~~~~ 410 (415)
+.+. ++.|||+++|+.++.||+++++.+...
T Consensus 286 ~~~~------~~~Gel~v~~~~~~~gy~~~~~~~~~~ 316 (436)
T TIGR01923 286 VDNK------EGHGEIMVKGANLMKGYLYQGELTPAF 316 (436)
T ss_pred eCCC------CCceEEEEECCccchhhCCChhhhhhh
Confidence 4232 377999999999999999988776543
No 116
>PLN03051 acyl-activating enzyme; Provisional
Probab=100.00 E-value=1.5e-40 Score=324.82 Aligned_cols=312 Identities=21% Similarity=0.198 Sum_probs=237.8
Q ss_pred cCCchhHHHHHHHHHHhCCeEeecCCCCCHHHHHHHHHhcCceEEEEcccc------hHHHHhhhhhcCceEEEeCC-CC
Q 014952 84 LQNCPQFVFAFLGASYIGATSTTANPFYTPPEIAKQAIASKAKIIITQAVY------NDKVRDLSEHHGARIVTIDP-PP 156 (415)
Q Consensus 84 ~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~vl~~~~~------~~~~~~~~~~~~~~~i~~~~-~~ 156 (415)
++|++++++++|||+++|++++|+++.++.+++.+++++++++++|+++.. .+.+.........+.+.+.. ..
T Consensus 1 ~~n~~e~~~~~lA~~~~Gav~vpl~~~~~~~el~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 80 (499)
T PLN03051 1 MPMTVDAVIIYLAIVLAGCVVVSVADSFSAKEIATRLDISGAKGVFTQDVVLRGGRALPLYSKVVEAAPAKAIVLPAAGE 80 (499)
T ss_pred CCCcHHHHHHHHHHHHcCCEEEeeCCCCCHHHHHHHHHhcCceEEEecCceeeCCeeecchhhhhhcccceEEEEeccCc
Confidence 589999999999999999999999999999999999999999999998642 12222222111223333321 10
Q ss_pred -------CCccchhhhhhhccc------CCCCcccCCCCCeEEEecCCCCCCCCceeeechHHHHHHHhhhhcCCCCCcc
Q 014952 157 -------ENCLHFSELITQADE------NEIPAVKINPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLY 223 (415)
Q Consensus 157 -------~~~~~~~~l~~~~~~------~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~ 223 (415)
.....+++++..... .........++++++|+|||||||.||||+++|++++........ .+.
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~yTSGTTG~PKgV~~sh~~~~~~~~~~~~----~~~ 156 (499)
T PLN03051 81 PVAVPLREQDLSWCDFLGVAAAQGSVGGNEYSPVYAPVESVTNILFSSGTTGEPKAIPWTHLSPLRCASDGWA----HMD 156 (499)
T ss_pred ccCCccccCcccHHHHHhhhccccccccccCCcccCCccceEEEEeCCCCCCCCceEEEccchHHHHHHHHHH----hcC
Confidence 122345555311110 011111235689999999999999999999999998776544443 335
Q ss_pred CCCCcEEEEccchHHHHhhHHHHHHHHHcCcEEEEcCC-CCHHHHHHHHHhcCceeeecchHHHHHHHcCCC--CCCCCc
Q 014952 224 LHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIMQK-FDIVKLMELVQKYKVTVAPFVPPIVLAVAKSGD--VDKYDM 300 (415)
Q Consensus 224 ~~~~~~~~~~~pl~~~~g~~~~~l~~l~~G~~~v~~~~-~~~~~~~~~l~~~~~t~l~~~p~~l~~l~~~~~--~~~~~l 300 (415)
+.++|++++.+|++|..++. .++.++..|+++++.+. +++..+++.++++++|++.++|+++..|++... ....++
T Consensus 157 ~~~~d~~l~~~pl~h~~g~~-~~~~~l~~G~t~v~~~~~~~~~~~~~~i~~~~vt~~~~vP~~~~~l~~~~~~~~~~~~~ 235 (499)
T PLN03051 157 IQPGDVVCWPTNLGWMMGPW-LLYSAFLNGATLALYGGAPLGRGFGKFVQDAGVTVLGLVPSIVKAWRHTGAFAMEGLDW 235 (499)
T ss_pred CCCCCEEEEccCcceeeehH-HHHHHHHcCCEEEecCCCCCcHHHHHHHHHhCCcEEEeCHHHHHHHHhcCccccccCCc
Confidence 67889999999999999976 57889999999998874 788999999999999999999999999887643 344578
Q ss_pred ccceeeeecCCCCCHHHHHHHHhhCC-CCccccccccccCCccccccccccCCccccCCCcccccccCCeEEEEeCCCCC
Q 014952 301 SSIRTVMSGAAPMGKELEDAVRAKLP-HAKLGQGYGMTEAGPVLSMCLAFAKEPFEIKSGACGTVVRNAEMKIVDPDTGI 379 (415)
Q Consensus 301 ~~lr~v~~gG~~l~~~~~~~~~~~~~-~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~G~p~~~~~v~i~d~~~~~ 379 (415)
++||.+++||++++++..+++++.++ +..+++.||+||+++.+.... .......+++|+|.++++++|+| ++|+
T Consensus 236 ~~Lr~i~~gG~~~~~~~~~~~~~~~~~~~~~~~~YG~TE~~~~~~~~~----~~~~~~~~~~G~p~~~~~~~ivd-~~g~ 310 (499)
T PLN03051 236 SKLRVFASTGEASAVDDVLWLSSVRGYYKPVIEYCGGTELASGYISST----LLQPQAPGAFSTASLGTRFVLLN-DNGV 310 (499)
T ss_pred hhheEEEecCCCCCHHHHHHHHHhccccceeEeeeccccccceeeccc----ccCCCCCccccCCCCCceEEEEC-CCCC
Confidence 99999999999999999988877431 478999999999875332221 11123467899999999999999 5689
Q ss_pred CCCCC--CceeEEEecCcc--ccccccCCc
Q 014952 380 SLPRN--QAGEICIRGAQI--MKGTYHIYA 405 (415)
Q Consensus 380 ~~~~g--~~Gel~v~~~~~--~~gY~~~~~ 405 (415)
+++.| +.|||+++||.+ +.|||+++.
T Consensus 311 ~~~~g~~~~Gel~v~g~~~~~~~gy~~~~~ 340 (499)
T PLN03051 311 PYPDDQPCVGEVALAPPMLGASDRLLNADH 340 (499)
T ss_pred CCCCCCCcceEEEEecCcCCCCccccCCcc
Confidence 99988 589999999977 589998753
No 117
>KOG1175 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=100.00 E-value=2.4e-40 Score=313.66 Aligned_cols=390 Identities=25% Similarity=0.327 Sum_probs=312.5
Q ss_pred CCCCCCCCCCCCHHhHHHhhh--ccCCCCcEEEeCCC----CCeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCch
Q 014952 15 KLPDIYIPNHLPLHTYCFENI--SQFADRPCIINGPT----GDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCP 88 (415)
Q Consensus 15 ~~~~~~~~~~~tl~~~l~~~a--~~~p~~~a~~~~~~----~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~ 88 (415)
.++.|.....+|..+.+..+. ..-+++++++.... ...+||.|+.+++.++|+.|++.|+++||+|++++|+.+
T Consensus 53 ~~~~w~~g~~ln~~~n~~~~~~~~~~~~~~a~~~~~~~~~~~~~~t~~el~~~v~~~a~~l~~~g~~kGD~V~~~mPm~~ 132 (626)
T KOG1175|consen 53 PFTKWFPGAFLNACYNCLDRHIKEKGGDKVAIIFEGNEGGDTEVWTYKELLDQVVRLANVLRKCGLKKGDTVAIYMPMIP 132 (626)
T ss_pred CCccccccchhhhhHhhhhhhhhhcCCCCcEEEEEecCCCceEEEEHHHHHHHHHHHHHHHHhcCCCCCcEEEEeccCCh
Confidence 456666666788877777764 22478888876532 245899999999999999999889999999999999999
Q ss_pred hHHHHHHHHHHhCCeEeecCCCCCHHHHHHHHHhcCceEEEEcccchHHHHh---------hhhhcC------ceEEEeC
Q 014952 89 QFVFAFLGASYIGATSTTANPFYTPPEIAKQAIASKAKIIITQAVYNDKVRD---------LSEHHG------ARIVTID 153 (415)
Q Consensus 89 ~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~vl~~~~~~~~~~~---------~~~~~~------~~~i~~~ 153 (415)
+++++.+||.++|++.+++-...+..++...+++.+++++++........+. ...... ...+.+.
T Consensus 133 e~~ia~lA~~r~Gai~~~v~~~fs~~~l~~Rl~~~~~k~i~t~d~~~~~~k~i~~~~~~~~a~~~~~~~~~~~~~~~~~~ 212 (626)
T KOG1175|consen 133 EAVIAMLACARIGAIHSSVFAGFSAKELLDRLQDSKAKVIITQDVVARGGKSINLKCIVLEALLLVSDKSRPVWLDLIVS 212 (626)
T ss_pred HHHHHHHHHhhcCeEEEEeeccCCHHHHHHHHHhcCCCEEEEEeeeccCCCccchhhhHHHHhhcccccccccceeeEEe
Confidence 9999999999999999999999999999999999999999997754432111 111111 0111111
Q ss_pred CCCCCccchhhhhhhcccCCCCcccCCCCCeEEEecCCCCCCCCceeeechHHHHHHHhhhhcCCCCCccCCCCcEEEEc
Q 014952 154 PPPENCLHFSELITQADENEIPAVKINPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCV 233 (415)
Q Consensus 154 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (415)
. ......++.. ........+......+++.+|+|||||||.||++.+++....-........ .++..++|+..+.
T Consensus 213 ~-~~~d~~~~~~-~~~a~~~~~~~~~~~edpl~IlfTSGtTg~PK~v~ht~~g~ll~~~~~~~~---~~d~q~~dv~~~~ 287 (626)
T KOG1175|consen 213 R-RNRDLFWSLE-LKKASPEHPCVPVKAEDPLFILFTSGTTGKPKGVIHTTGGYLLGAALTSRY---HFDLQPSDVLWCA 287 (626)
T ss_pred c-ccccccHHHH-hhhcCCCCCceecCccCceEEEecCCCCCCCCceeeccCcchHHHhhhcce---eccCCCcceEEEe
Confidence 1 1112233333 344444455778888999999999999999999999998765544333322 6688999999999
Q ss_pred cchHHHHhhHHHHHHHHHcCcEEEEcC--CCCHHHHHHHHHhcCceeeecchHHHHHHHcCCC--CCCCCcccceeeeec
Q 014952 234 LPLFHIYSLNSVLLCALRVGAAILIMQ--KFDIVKLMELVQKYKVTVAPFVPPIVLAVAKSGD--VDKYDMSSIRTVMSG 309 (415)
Q Consensus 234 ~pl~~~~g~~~~~l~~l~~G~~~v~~~--~~~~~~~~~~l~~~~~t~l~~~p~~l~~l~~~~~--~~~~~l~~lr~v~~g 309 (415)
..+.|+.+-++..+.+|..|+++++.+ ++++..+++.+.++++|++++.|..++.+.+... ....++++||.+.++
T Consensus 288 ~d~GWi~g~~~~~~gpl~~Ga~~vl~~g~p~~~~~~~~~v~k~~it~l~t~pt~~r~l~~~~~~~~~~~~~~sLk~~~S~ 367 (626)
T KOG1175|consen 288 SDLGWITGHSYVLYGPLLNGATVVLYEGPPFDPGRIWKILDKYKVTVLYTAPTAYRLLRRLGQEDVTSYSLKSLRTCGSV 367 (626)
T ss_pred cccCeeeccchhhhhhhhcCcEEEEEcCCCCChhhhhhhHhhcceEEEEeccHHHHHHHHhccccccccccceEEEEeec
Confidence 999999999988888999999999985 4699999999999999999999999997766543 345556789999999
Q ss_pred CCCCCHHHHHHHHhhCCCCccccccccccCCccccccccccCCccccCCCcccccccCCeEEEEeCCCCCCCCCC-Ccee
Q 014952 310 AAPMGKELEDAVRAKLPHAKLGQGYGMTEAGPVLSMCLAFAKEPFEIKSGACGTVVRNAEMKIVDPDTGISLPRN-QAGE 388 (415)
Q Consensus 310 G~~l~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~G~p~~~~~v~i~d~~~~~~~~~g-~~Ge 388 (415)
||++.++...++.+.++..++.+.||+||+|+.+..+..... ...+++.|+|.+++.+.|.|+ +|++++.+ +.|+
T Consensus 368 Gepi~~~~~ew~~~~~~~~pv~e~~~qtEtG~~~i~~~~g~~---p~~pg~~~~p~~g~~v~i~de-~g~~~~~~~~~G~ 443 (626)
T KOG1175|consen 368 GEPINPEAWEWWKRVTGLDPIYETYGQTETGGICITPKPGKL---PIKPGSAGKPFPGYDVQILDE-NGNELPPSTGNGE 443 (626)
T ss_pred CccCCcchHHHHHHhcCccchhhceeeeccCceeeeccCCCC---CcCccccCCCCCCcceEEECC-CCCCcCCCCceeE
Confidence 999999999999999933369999999999998776632111 477899999999999999995 68988877 9999
Q ss_pred EEEecC---ccccccccCCcceeeeeee
Q 014952 389 ICIRGA---QIMKGTYHIYAPFLLSIVC 413 (415)
Q Consensus 389 l~v~~~---~~~~gY~~~~~~~~~~~~~ 413 (415)
|+++.+ +++++||+|++.+++.+|+
T Consensus 444 l~~~~~~P~~~~r~~~~n~erf~~~yf~ 471 (626)
T KOG1175|consen 444 LRLKPPWPPGMFRTLWGNHERFRAAYFK 471 (626)
T ss_pred EEEeCCCCccccccccCCHHHhhhhhcc
Confidence 999985 6789999999999998887
No 118
>PRK08308 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.3e-38 Score=304.10 Aligned_cols=288 Identities=18% Similarity=0.207 Sum_probs=245.2
Q ss_pred EEeCCCCCeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHHhCCeEeecCCCCCHHHHHHHHHhc
Q 014952 44 IINGPTGDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGATSTTANPFYTPPEIAKQAIAS 123 (415)
Q Consensus 44 ~~~~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~ 123 (415)
+++. ++.+||+||.++++++|+.|. +|+++|++|+++++|+.+++++++|++++|++++|+++..+.+.+..+++++
T Consensus 2 ~~~~--~~~~ty~el~~~~~~~a~~l~-~~~~~g~~V~i~~~~~~~~~~~~la~~~~G~~~v~l~~~~~~~~~~~~~~~~ 78 (414)
T PRK08308 2 LIVN--DEEYSKSDFDLRLQRYEEMEQ-FQEAAGNRFAVCLKDPFDIITLVFFLKEKGASVLPIHPDTPKEAAIRMAKRA 78 (414)
T ss_pred eEec--CceecHHHHHHHHHHHHHHHH-cCCCCCCEEEEECCCChHHHHHHHHHHHCCeEEEecCCCCCHHHHHHHHHhC
Confidence 4555 789999999999999999985 6899999999999999999999999999999999999999999999999999
Q ss_pred CceEEEEcccchHHHHhhhhhcCceEEEeCCCCCCccchhhhhhhcccCCCCcccCCCCCeEEEecCCCCCCCCceeeec
Q 014952 124 KAKIIITQAVYNDKVRDLSEHHGARIVTIDPPPENCLHFSELITQADENEIPAVKINPDDVVALPYSSGTTGLPKGVMLT 203 (415)
Q Consensus 124 ~~~~vl~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t 203 (415)
+++++++++.... . .. .....+++.++|+|||||||.||+|.++
T Consensus 79 ~~~~~i~~~~~~~---------------~--------------~~-------~~~~~~~~~~~i~~TSGtTG~PKgv~~s 122 (414)
T PRK08308 79 GCHGLLYGESDFT---------------K--------------LE-------AVNYLAEEPSLLQYSSGTTGEPKLIRRS 122 (414)
T ss_pred CCCEEEecCcccc---------------c--------------cc-------CCCCCCCCceEEEECCCCCCCCcEEEEe
Confidence 9999998653100 0 00 0123467899999999999999999999
Q ss_pred hHHHHHHHhhhhcCCCCCccCCCCcEEEEccchHHHHhhHHHHHHHHHcCcEEEEcCCCCHHHHHHHHHhcCceeeecch
Q 014952 204 HKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIMQKFDIVKLMELVQKYKVTVAPFVP 283 (415)
Q Consensus 204 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~l~~l~~G~~~v~~~~~~~~~~~~~l~~~~~t~l~~~p 283 (415)
|+++..+...... .+....+++.+..+|++|.+|+...++.++..|+++++.+.+++..+++.++++++|++.++|
T Consensus 123 ~~~l~~~~~~~~~----~~~~~~~~~~~~~~p~~h~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~l~~~~~t~~~~~P 198 (414)
T PRK08308 123 WTEIDREIEAYNE----ALNCEQDETPIVACPVTHSYGLICGVLAALTRGSKPVIITNKNPKFALNILRNTPQHILYAVP 198 (414)
T ss_pred hHhHHHHHHHHHH----hhCCCcccEEEEecCcHHHHHHHHHHHHHHHcCCEEEecCCCCHHHHHHHHHHhCCeEEEcCH
Confidence 9999988777666 345678899999999999999877789999999999999889999999999999999999999
Q ss_pred HHHHHHHcCCCCCCCCcccceeeeecCCCCCHHHHHHHHhhCCCCccccccccccCCccccccccccCCccccCCCcccc
Q 014952 284 PIVLAVAKSGDVDKYDMSSIRTVMSGAAPMGKELEDAVRAKLPHAKLGQGYGMTEAGPVLSMCLAFAKEPFEIKSGACGT 363 (415)
Q Consensus 284 ~~l~~l~~~~~~~~~~l~~lr~v~~gG~~l~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~G~ 363 (415)
.++..+.+..... .+++.+++||+++++++.+++++. +.++++.||+||++++.. . ......+++|+
T Consensus 199 ~~~~~l~~~~~~~----~~l~~~~~~G~~l~~~~~~~~~~~--~~~~~~~YG~tE~~~~~~-~------~~~~~~~~~G~ 265 (414)
T PRK08308 199 LMLHILGRLLPGT----FQFHAVMTSGTPLPEAWFYKLRER--TTYMMQQYGCSEAGCVSI-C------PDMKSHLDLGN 265 (414)
T ss_pred HHHHHHHhcCCcc----ccccEEEEccCCCCHHHHHHHHHh--CChhhhccCccccCCeee-c------CCCCCCCccCc
Confidence 9999998764321 368889999999999999999987 578999999999985332 1 12234578999
Q ss_pred cccCCeEEEEeCCCCCCCCCCCceeEEEecC
Q 014952 364 VVRNAEMKIVDPDTGISLPRNQAGEICIRGA 394 (415)
Q Consensus 364 p~~~~~v~i~d~~~~~~~~~g~~Gel~v~~~ 394 (415)
|+|++++++.+. .|+.|||++++.
T Consensus 266 p~~~~~~~~~~~-------~~~~gel~v~~~ 289 (414)
T PRK08308 266 PLPHVSVSAGSD-------ENAPEEIVVKMG 289 (414)
T ss_pred cCCCeEEEEecC-------CCCCceEEEEcC
Confidence 999999999862 256799999865
No 119
>PTZ00297 pantothenate kinase; Provisional
Probab=100.00 E-value=2.5e-38 Score=329.93 Aligned_cols=363 Identities=13% Similarity=0.106 Sum_probs=268.5
Q ss_pred cCCCCCCCCCCCCHHhHHHhhhccCCCCcEEEeC---CCCCeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhH
Q 014952 14 SKLPDIYIPNHLPLHTYCFENISQFADRPCIING---PTGDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQF 90 (415)
Q Consensus 14 ~~~~~~~~~~~~tl~~~l~~~a~~~p~~~a~~~~---~~~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~ 90 (415)
..+|++ |+..|+.+++.+.++++|+++++... .+.+++||+|+.++++++|++|.++|+++||+|+|+++|+++|
T Consensus 418 ~~~~~~--~~~~Tl~dll~~~a~~~pd~~al~~~~~~g~~~~lTY~El~~~V~~lAa~L~~lGV~~GDrVaIls~N~~Ew 495 (1452)
T PTZ00297 418 REYNPL--AGVRSLGEMWERSVTRHSTFRCLGQTSESGESEWLTYGTVDARARELGSGLLALGVRPGDVIGVDCEASRNI 495 (1452)
T ss_pred hcCCCc--ccCCCHHHHHHHHHHHCCCCeEEEEeccCCCceEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHH
Confidence 445555 34579999999999999999999742 1226899999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCeEeecCCCCCHHHHHHHHHhcCceEEEEcccchHHHHhhhhhcCceEEEeCCC---C-------C--C
Q 014952 91 VFAFLGASYIGATSTTANPFYTPPEIAKQAIASKAKIIITQAVYNDKVRDLSEHHGARIVTIDPP---P-------E--N 158 (415)
Q Consensus 91 ~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~i~~~~~---~-------~--~ 158 (415)
+++.+||+.+|++.+|+.+ +.+++.+++++++++++|++.+...++.......-.++|++++. . . .
T Consensus 496 via~lA~~~~GaV~VPly~--t~~eL~yIL~~S~akvVfv~~~~l~kl~~i~~~~Lr~IIv~d~~~~~~~~~~~~~~~i~ 573 (1452)
T PTZ00297 496 VILEVACALYGFTTLPLVG--KGSTMRTLIDEHKIKVVFADRNSVAAILTCRSRKLETVVYTHSFYDEDDHAVARDLNIT 573 (1452)
T ss_pred HHHHHHHHHcCCEEEeCCC--CHHHHHHHHHhcCCcEEEEchhHHHHHHhhcccCCcEEEEECCCcccccccccccCCcc
Confidence 9999999999999999975 46789999999999999999887777666543222456666531 0 0 1
Q ss_pred ccchhhhhhhcccCCC-CcccCCCCCeEEEec---CCCCCCCCceeeechHHHHHHHhhhhcCCCCCccCCCCcEEEEcc
Q 014952 159 CLHFSELITQADENEI-PAVKINPDDVVALPY---SSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVL 234 (415)
Q Consensus 159 ~~~~~~l~~~~~~~~~-~~~~~~~~~~a~i~~---TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (415)
..++++++........ ......+++++.|+| ||||||.||||++||++++.++........ .....++|++++++
T Consensus 574 ~~s~~~ll~~G~~~~~~~~~~~~~dDlatIiYtSyTSGTTG~PKGVmLTH~Nlla~~~~~~~~~~-~~~~~~~D~~Ls~L 652 (1452)
T PTZ00297 574 LIPYEFVEQKGRLCPVPLKEHVTTDTVFTYVVDNTTSASGDGLAVVRVTHADVLRDISTLVMTGV-LPSSFKKHLMVHFT 652 (1452)
T ss_pred eeeHHHHHhcCcccCccccCCCCcccEEEEEecCCCCCCCcCCcEEEEeHHHHHHHHHHHhhhcc-ccCCCCCCEEEEec
Confidence 3567787544321111 123346788999985 999999999999999999998887654211 11345789999999
Q ss_pred chHHHHhhHHHHHHHHHcCcEEEEcCCCCHHHHHHHHHhcCceeeecchHHHHHHHcCCC----C---------------
Q 014952 235 PLFHIYSLNSVLLCALRVGAAILIMQKFDIVKLMELVQKYKVTVAPFVPPIVLAVAKSGD----V--------------- 295 (415)
Q Consensus 235 pl~~~~g~~~~~l~~l~~G~~~v~~~~~~~~~~~~~l~~~~~t~l~~~p~~l~~l~~~~~----~--------------- 295 (415)
|++|+++.. ..+.++..|++++. +++..+++.+++++||++.++|.++.++.+... .
T Consensus 653 PLaHI~er~-~~~~~l~~G~~I~~---~d~~~lledL~~~rPTv~~~VPrv~ekI~~~i~~~~~~~~~~~~~lf~~A~~~ 728 (1452)
T PTZ00297 653 PFAMLFNRV-FVLGLFAHGSAVAT---VDAAHLQRAFVKFQPTILVAAPSLFSTSRLQLSRANERYSAVYSWLFERAFQL 728 (1452)
T ss_pred hHHHHHHHH-HHHHHHHcCCEEEe---CCHHHHHHHHHHHCCEEEEecHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHH
Confidence 999999976 56778999999874 478999999999999999999999986653210 0
Q ss_pred -------CCCC----------------cccceeeeecCCCCCHHHHHHHHhhCCCCccccccccccCCccccccccccCC
Q 014952 296 -------DKYD----------------MSSIRTVMSGAAPMGKELEDAVRAKLPHAKLGQGYGMTEAGPVLSMCLAFAKE 352 (415)
Q Consensus 296 -------~~~~----------------l~~lr~v~~gG~~l~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~ 352 (415)
.... -.++|.+++||+ ++........ +.++..+||+||.. +++ .
T Consensus 729 k~~~~~~g~~~~~l~d~LVf~kir~~lGGrlr~~isGga---~~~l~~~l~~--~i~i~~g~glTE~~---~~~-----~ 795 (1452)
T PTZ00297 729 RSRLINIHRRDSSLLRFIFFRATQELLGGCVEKIVLCVS---EESTSFSLLE--HISVCYVPCLREVF---FLP-----S 795 (1452)
T ss_pred HHHHHhcCCCCcHHHHHHHHHHHHHHhcCCeEEEEECCC---ccccChHHhC--CceEEEecceEEee---eec-----C
Confidence 0000 146888888873 2222233333 46677899999953 222 1
Q ss_pred ccccCCCcccccccCCeEEEEeC-CCCCCCCCCCceeEEEecCccccccccCCcceeee
Q 014952 353 PFEIKSGACGTVVRNAEMKIVDP-DTGISLPRNQAGEICIRGAQIMKGTYHIYAPFLLS 410 (415)
Q Consensus 353 ~~~~~~~~~G~p~~~~~v~i~d~-~~~~~~~~g~~Gel~v~~~~~~~gY~~~~~~~~~~ 410 (415)
..... ..|+|+|++++||.|. +.+. .+..|||+++ |++||++|.+.
T Consensus 796 ~~~~~--~~G~PlpgvEvKI~~~~E~~~---~~~~GEIlvr-------~~kdpe~T~e~ 842 (1452)
T PTZ00297 796 EGVFC--VDGTPAPSLQVDLEPFDEPSD---GAGIGQLVLA-------KKGEPRRTLPI 842 (1452)
T ss_pred CCCcc--cCCeecCceEEEEcccccccC---CCCCCeEEEE-------ECCChHHHHHh
Confidence 12222 2399999999999873 3222 2346999995 45899988763
No 120
>COG1020 EntF Non-ribosomal peptide synthetase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=4.3e-35 Score=295.37 Aligned_cols=367 Identities=23% Similarity=0.303 Sum_probs=297.1
Q ss_pred CCCCCCCHHhHHHhhhccCCCCcEEEeCCCCCeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHH
Q 014952 20 YIPNHLPLHTYCFENISQFADRPCIINGPTGDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASY 99 (415)
Q Consensus 20 ~~~~~~tl~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~ 99 (415)
..|...++++.+...+...|++.+++.. +..+||+|+..+++++|+.|.+.|+.+++.|+++.+.+.+++++.+|+++
T Consensus 222 ~~~~~~~i~~~f~~~a~~~p~~~a~~~~--~~~lty~el~~~a~~la~~l~~~g~~~~~~V~i~~~rs~~~i~~~l~ilk 299 (642)
T COG1020 222 PIPLRLTIHLLFEEQAATTPDAVALVRG--GQQLTYAELDARANRLARLLISLGVGPGETVAILADRSLELVVALLAVLK 299 (642)
T ss_pred CCCccchHHHHHHHHHHhCCCceeEecC--CCcccHHHHHHHHHHHHHHHHHcCCCCCCeEEEEcCCCHHHHHHHHHHHh
Confidence 3344588999999999999999999997 89999999999999999999999999999999999889999999999999
Q ss_pred hCCeEeecCCCCCHHHHHHHHHhcCceEEEEcccchHHHHhhhhhcCceEEEeCCCCCCccchhhhhhhcccCCCCcccC
Q 014952 100 IGATSTTANPFYTPPEIAKQAIASKAKIIITQAVYNDKVRDLSEHHGARIVTIDPPPENCLHFSELITQADENEIPAVKI 179 (415)
Q Consensus 100 ~G~~~v~l~~~~~~~~~~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 179 (415)
+|+.++|++|.++.+.+..++.+.++..+++........... .. +.++... .............
T Consensus 300 aG~~yvP~d~~~P~~r~~~~l~~~~~~~~~~~~~~~~~~~~~----~~--~~~~~~~----------~~~~~~~~~~~~~ 363 (642)
T COG1020 300 AGAAYVPLDPLYPAERLAYILEDSRPTLLLTQAHLRVDDVGL----PG--LALDDAL----------SEIPDTDPIPQAL 363 (642)
T ss_pred cCCeEecCCCCChHHHHHHHHhhcCccEEEeccccccccccC----Cc--ccccccc----------ccCCccCcccccC
Confidence 999999999999999999999999999999973321110000 00 1111110 0000000112334
Q ss_pred CCCCeEEEecCCCCCCCCceeeechHHHHHHHhhhhcCCCCCccCCCCcEEEEccchHHHHhhHHHHHHHHHcCcEEEEc
Q 014952 180 NPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIM 259 (415)
Q Consensus 180 ~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~l~~l~~G~~~v~~ 259 (415)
.+++.+|++|||||||.||||..+|+++.+...+... .+..+..++++...++......+ .++.++..|+++++.
T Consensus 364 ~~~~~ayiiytsgstg~Pkgv~~~h~~~~~~~~~~~~----~~~~~~~d~~l~~~s~~fD~~~~-~~f~~l~~G~~l~~~ 438 (642)
T COG1020 364 LGDALAYIIYTSGSTGQPKGVRIEHRALANLLNDAGA----RFGLDADDRVLALASLSFDASVF-EIFGALLEGARLVLA 438 (642)
T ss_pred CCCCeEEEEEccCCCCCCCCceecCHHHHHHHHHHHH----hcCCCcccEEeecCCcccchhHH-HHHHHHhCCCEEEec
Confidence 5689999999999999999999999999997776666 45688889999999997777776 589999999999998
Q ss_pred CC---CCHHHHHHHHHhcCceeeecchHHHHHHHcCCCCC--CCCcccceeeeecCCCCCHHHHHHHHhhCC-CCccccc
Q 014952 260 QK---FDIVKLMELVQKYKVTVAPFVPPIVLAVAKSGDVD--KYDMSSIRTVMSGAAPMGKELEDAVRAKLP-HAKLGQG 333 (415)
Q Consensus 260 ~~---~~~~~~~~~l~~~~~t~l~~~p~~l~~l~~~~~~~--~~~l~~lr~v~~gG~~l~~~~~~~~~~~~~-~~~~~~~ 333 (415)
+. .++..+.+.+.++++|++..+|..+..++...... ....+.+|.+.+||+.++.++.+++....+ ...+.+.
T Consensus 439 ~~~~~~~~~~l~~~~~~~~vt~~~~~p~~~~~~~~~~~~~~~~~~~~~lr~~~~gGe~l~~~~~~~~~~~~~~~~~l~~~ 518 (642)
T COG1020 439 PALLQVDPAALLELLEAQGITVLLLVPLLLRLLLLAALAPDLISPCERLRQLLSGGEALPLALVQRLLQLAALARRLLNL 518 (642)
T ss_pred CccccCCHHHHHHHHHHcCCEEEEecHHHHHHHHhchhhccccCCcccccEEEEcCCCCCHHHHHHHHHhccccceEeec
Confidence 74 68899999999999999999999999888763222 222345999999999999999999988764 4689999
Q ss_pred cccccCCccccccccccCCccccCCCcccccccCCeEEEEeCCCCCCCCCCCceeEEEecCccccccccCCcceeeeeee
Q 014952 334 YGMTEAGPVLSMCLAFAKEPFEIKSGACGTVVRNAEMKIVDPDTGISLPRNQAGEICIRGAQIMKGTYHIYAPFLLSIVC 413 (415)
Q Consensus 334 YG~tE~~~~~~~~~~~~~~~~~~~~~~~G~p~~~~~v~i~d~~~~~~~~~g~~Gel~v~~~~~~~gY~~~~~~~~~~~~~ 413 (415)
||.||+......... . ..... ...+|+|+++..+.|+| +.+++++.|..||+++.|.++.+||+++|+.+...|+-
T Consensus 519 ygpTe~~~~~~~~~~-~-~~~~~-~~piG~p~~n~~~~ild-~~~~~~p~gv~gel~i~g~~~a~gy~~~p~lt~~~f~~ 594 (642)
T COG1020 519 YGPTEATLDAPSFPI-S-AELES-RVPIGRPVANTQLYILD-QGLRPLPLGVPGELYIAGLGLALGYLNRPDLTAERFIA 594 (642)
T ss_pred cCccHHhhheeeEEc-c-cccCC-CCCcceeeCCCeEEEEC-CCCCcCCCCCCeeeEECCcchhhhhcCChhhhHHHhhh
Confidence 999996533322211 1 11111 56899999999999999 77999999999999999999999999999999998874
No 121
>TIGR03089 conserved hypothetical protein TIGR03089. This protein family is found, so far, only in the Actinobacteria (Streptomyces, Mycobacterium, Corynebacterium, Nocardia, Propionibacterium, etc.) and never more than one to a genome. Members show twilight-level sequence similarity to family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=99.96 E-value=8.6e-28 Score=208.10 Aligned_cols=211 Identities=17% Similarity=0.146 Sum_probs=164.6
Q ss_pred HHhhhccCCCCcEEEeC-C---CCCeeeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEcCCchhHHHHHHHHHHhCCeEe
Q 014952 31 CFENISQFADRPCIING-P---TGDVYTYADVELTSRKVAAGLSK-LGVQKGDVIMLLLQNCPQFVFAFLGASYIGATST 105 (415)
Q Consensus 31 l~~~a~~~p~~~a~~~~-~---~~~~~Ty~el~~~~~~~a~~L~~-~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v 105 (415)
|...++++|++++++.. + .++++||+||.++++++|+.|++ +|+++||+|+++++|+.+++++++|++++|++++
T Consensus 2 ~~~~~~~~p~~~al~~~~~~~~~~~~~Ty~~l~~~~~~~a~~L~~~~Gv~~GdrV~i~~~n~~~~~~~~~a~~~~G~v~v 81 (227)
T TIGR03089 2 LSPLLAADPASPRLTFYDDATGERVELSAATLANWVAKTANLLQDELDAEPGSRVALDLPAHWQTAVWLLAAWSTGVEVV 81 (227)
T ss_pred hhhhhhhCCCCcEEEEEcCCCCeeEEEEHHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHHHHHHHHHHHcCCEEE
Confidence 57788899999999753 2 23479999999999999999998 7999999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHHHHHhcCceEEEEcccchHHHHhhhhhcCceEEEe-----CC-----CCCCccchhhhhhhcccCCCC
Q 014952 106 TANPFYTPPEIAKQAIASKAKIIITQAVYNDKVRDLSEHHGARIVTI-----DP-----PPENCLHFSELITQADENEIP 175 (415)
Q Consensus 106 ~l~~~~~~~~~~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~i~~-----~~-----~~~~~~~~~~l~~~~~~~~~~ 175 (415)
|++ ++++++++++.+..+.+.. ...++.+ .. ...+..++.+.+........+
T Consensus 82 p~n-------------~s~a~~~v~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (227)
T TIGR03089 82 LAG-------------DPDADVVVTGPDRLAAAAG-----SGEVVALSLDPLGRRVAGELPPGVIDFAPEVRVHGDQFAP 143 (227)
T ss_pred eCC-------------CCCCCEEEeCcchhhhccc-----CCceEEEeccccccCCCCCCCCcccchhhhhhccCCCCCC
Confidence 996 6789999998887666431 1222322 11 122233455442221121222
Q ss_pred cccCCCCCeEEEecCCCCCCCCceeeechHHHHHHHhhhhcCCCCCccCCCCcEEEEccchHHHHhhHHHHHHHHHcCcE
Q 014952 176 AVKINPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAA 255 (415)
Q Consensus 176 ~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~l~~l~~G~~ 255 (415)
.....+++++.|+||||+ +|+++..+. . ..++.++|+++ .+|++|..|+...++.++..|++
T Consensus 144 ~~~~~~~D~a~l~yTsg~---------~~~~~~~~~----~----~~~l~~~D~~l-~~Pl~H~~gl~~~~~~~l~~G~t 205 (227)
T TIGR03089 144 YEPPDATAPALVAGGGEW---------TGAELVAAA----R----AAGLPPGDRVL-VLAWTDLEDFLATLLAPLAAGGS 205 (227)
T ss_pred CCCCCCCcceeeeccccc---------cHHHHHHHH----h----hcCCCCCCeEE-ecCCCchHHHHHHHHHHhccCce
Confidence 214567899999999985 566655544 2 34678899999 99999999998789999999999
Q ss_pred EEEcCCCCHHHHHHHHHhcCce
Q 014952 256 ILIMQKFDIVKLMELVQKYKVT 277 (415)
Q Consensus 256 ~v~~~~~~~~~~~~~l~~~~~t 277 (415)
+++.++|++..+++.++++|+|
T Consensus 206 ~v~~~rFd~~~~l~~i~~~~vT 227 (227)
T TIGR03089 206 LVLVTHPDPARLDQIAETERVT 227 (227)
T ss_pred EEEecCCCHHHHHHHHHhhcCC
Confidence 9999999999999999999987
No 122
>PRK07824 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=99.93 E-value=5.3e-25 Score=206.26 Aligned_cols=193 Identities=26% Similarity=0.342 Sum_probs=160.1
Q ss_pred cCCCCCeEEEecCCCCCCCCceeeechHHHHHHHhhhhcCCCCCccCCCCcEEEEccchHHHHhhHHHHHHHHHcCcEEE
Q 014952 178 KINPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAIL 257 (415)
Q Consensus 178 ~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~l~~l~~G~~~v 257 (415)
...++++++|+|||||||.||+|.++|+++.......... +...++++..+|++|..++. .++.++..|++.+
T Consensus 31 ~~~~~d~a~il~TSGTTG~PKgv~~s~~~l~~~~~~~~~~------~~~~~~~~~~~p~~~~~g~~-~~~~~l~~g~~~v 103 (358)
T PRK07824 31 EPIDDDVALVVATSGTTGTPKGAMLTAAALTASADATHDR------LGGPGQWLLALPAHHIAGLQ-VLVRSVIAGSEPV 103 (358)
T ss_pred CCCCCCeEEEEeCCCCCCCCCEEEecHHHHHHHHHHHHhc------cCCCCeEEEECChHHHHHHH-HHHHHHHcCCeEE
Confidence 3446899999999999999999999999998877765542 23457889999999999987 4778899999988
Q ss_pred Ec---CCCCHHHHHHHHHhcC--ceeeecchHHHHHHHcCCCCCCCCcccceeeeecCCCCCHHHHHHHHhhCCCCcccc
Q 014952 258 IM---QKFDIVKLMELVQKYK--VTVAPFVPPIVLAVAKSGDVDKYDMSSIRTVMSGAAPMGKELEDAVRAKLPHAKLGQ 332 (415)
Q Consensus 258 ~~---~~~~~~~~~~~l~~~~--~t~l~~~p~~l~~l~~~~~~~~~~l~~lr~v~~gG~~l~~~~~~~~~~~~~~~~~~~ 332 (415)
+. ..+++..+++.+++++ .++...+|..+..++.... ....++++|.+++||+++++++.+++.+ + +.++++
T Consensus 104 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~p~~l~~~~~~~~-~~~~~~~l~~i~~gG~~l~~~~~~~~~~-~-~~~v~~ 180 (358)
T PRK07824 104 ELDVSAGFDPTALPRAVAELGGGRRYTSLVPMQLAKALDDPA-ATAALAELDAVLVGGGPAPAPVLDAAAA-A-GINVVR 180 (358)
T ss_pred ecCcCCCcCHHHHHHHHHHhCCCceEEEecHHHHHHHHhCcc-ccCCcccceEEEECCCCCCHHHHHHHHh-c-CCcEEe
Confidence 73 3578999999999998 5666778888877766543 2345789999999999999999999886 4 899999
Q ss_pred ccccccCCccccccccccCCccccCCCcccccccCCeEEEEeCCCCCCCCCCCceeEEEecCccccccccCCcce
Q 014952 333 GYGMTEAGPVLSMCLAFAKEPFEIKSGACGTVVRNAEMKIVDPDTGISLPRNQAGEICIRGAQIMKGTYHIYAPF 407 (415)
Q Consensus 333 ~YG~tE~~~~~~~~~~~~~~~~~~~~~~~G~p~~~~~v~i~d~~~~~~~~~g~~Gel~v~~~~~~~gY~~~~~~~ 407 (415)
.||+||++..+ ...|+|+++++++|.| |||+++|+.++.||++++++.
T Consensus 181 ~YG~TE~~~~~---------------~~~G~~~~g~~v~i~~------------Gei~v~g~~~~~gY~~~~~~~ 228 (358)
T PRK07824 181 TYGMSETSGGC---------------VYDGVPLDGVRVRVED------------GRIALGGPTLAKGYRNPVDPD 228 (358)
T ss_pred cccCCccCCCc---------------CcCceeCCCCEEEecC------------CEEEEecCccccccCCCcccc
Confidence 99999987422 1258999999999944 999999999999999998754
No 123
>KOG3628 consensus Predicted AMP-binding protein [General function prediction only]
Probab=99.93 E-value=4.2e-24 Score=207.40 Aligned_cols=373 Identities=16% Similarity=0.182 Sum_probs=268.3
Q ss_pred CCHHhHHHhhhccCCCCcEEEeCCC----CCeeeHHHHHHHHHHHHHHHHHc-CCCCCCEEEEEcCCchhHHHHHHHHHH
Q 014952 25 LPLHTYCFENISQFADRPCIINGPT----GDVYTYADVELTSRKVAAGLSKL-GVQKGDVIMLLLQNCPQFVFAFLGASY 99 (415)
Q Consensus 25 ~tl~~~l~~~a~~~p~~~a~~~~~~----~~~~Ty~el~~~~~~~a~~L~~~-g~~~g~~V~i~~~~~~~~~~~~lA~~~ 99 (415)
.++.++|+.+++.+|+.+|+..-.. ..++||++|..++.+++..|..+ -+++||.|++++++++|++++++||++
T Consensus 770 ~~ile~Lq~R~a~tp~~~a~~~~n~~~~~~~~~Tw~~f~krva~i~~~l~~k~~lk~Gd~V~Lmy~~sie~vaa~~~Cly 849 (1363)
T KOG3628|consen 770 LTILEILQWRAAKTPDHIAFTTLNARGATKKTLTWAQFHKRVARIAEYLQDKGHLKAGDHVVLMYPPSIEFVAAIYACLY 849 (1363)
T ss_pred HHHHHHHHHHhhcCCCceEEEEeccCCcccceeEHHHHHHHHHHHHHHHHhcccCCCCCeEEEEcCChHHHHHHHHHHHh
Confidence 7899999999999999999985432 36899999999999999999986 579999999999999999999999999
Q ss_pred hCCeEeecCCCCCH------HHHHHHHHhcCceEEEEcccchHHHHhhhhhcC-----c-eEEEeCCCCCCccchhhhhh
Q 014952 100 IGATSTTANPFYTP------PEIAKQAIASKAKIIITQAVYNDKVRDLSEHHG-----A-RIVTIDPPPENCLHFSELIT 167 (415)
Q Consensus 100 ~G~~~v~l~~~~~~------~~~~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~-----~-~~i~~~~~~~~~~~~~~l~~ 167 (415)
+|.+++|+.|-... +.+..+++.+++..|+++.+....++..-.... . .++..++..+. +....-..
T Consensus 850 ~GliPIpv~p~~~s~l~~~l~~~~~ii~~~kv~ailv~~~v~~lLrsr~~s~~~~~s~~p~i~~~~~~~~t-~~k~~~~~ 928 (1363)
T KOG3628|consen 850 LGLIPIPVPPPHASNLIEDLPTFRMIIKVYKVAAILVDQKVLKLLRSREASAHVDQSAIPLILVLPKLPET-IRKRKKNI 928 (1363)
T ss_pred cCeeeeccCCccHHhhhhhhHHHHHHHHHhhhheEEecHHHHHHHhhhhHHHHhhhhcchhhhcccccchh-hhhhhhhh
Confidence 99999999876443 678899999999999999887665544322111 1 22222222211 11100001
Q ss_pred hcccCCCCcccCCCCCeEEEecCCCCCCCCceeeechHHHHHHHhhhhcCCCCCccCCCCcEEEEccchHHHHhhHHHHH
Q 014952 168 QADENEIPAVKINPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLL 247 (415)
Q Consensus 168 ~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~l 247 (415)
.......++.-...+.+|++-|.--++|.--++.++|.++++.+....+ ...+.+..-++...+.+...|+..-.+
T Consensus 929 ~k~~~~~~~g~~~k~~~a~v~~~~~~dg~l~~~~msHsslla~Ck~iKe----~~~l~~~rpl~~~~~~~sGlgf~~wcL 1004 (1363)
T KOG3628|consen 929 KKLNTPTPPGLNNKETPALVWFNVSTDGMLIGVKMSHSSLLAFCKIIKE----TCQLYKSRPLLGCSSPYSGLGFNHWCL 1004 (1363)
T ss_pred hccCCCCCccccCCCceEEEEEEecCCcceeeeeccHHHHHHHHHHHHH----HHccccCCceEEEecCccchhHHHHHH
Confidence 1122223334456688999999999999999999999999999988888 345677777777777877788887778
Q ss_pred HHHHcCcEEEEcCC----CCHHHHHHHHHhcCceeeecchHHHHHHHcCCCCCCCCcccc------eeeeecCCCCCHHH
Q 014952 248 CALRVGAAILIMQK----FDIVKLMELVQKYKVTVAPFVPPIVLAVAKSGDVDKYDMSSI------RTVMSGAAPMGKEL 317 (415)
Q Consensus 248 ~~l~~G~~~v~~~~----~~~~~~~~~l~~~~~t~l~~~p~~l~~l~~~~~~~~~~l~~l------r~v~~gG~~l~~~~ 317 (415)
..+++|..-++.++ .++..+++.+.++++.-++.+-..+..+.+....+..+++.. ..+...-++....+
T Consensus 1005 lgVysGh~T~Li~p~~l~nnpsLll~~i~~~kvkDt~~~~~tln~c~~~l~t~~enl~~~gnn~s~s~vv~~~~RPr~al 1084 (1363)
T KOG3628|consen 1005 LGVYSGHPTLLISPMDLENNPSLLLQIISQYKVKDTYPTYSTLNLCQKGLETSVENLSKRGNNTSSSIVVPAEERPRIAL 1084 (1363)
T ss_pred HHHHcCCceeecCHHHhhcCHHHHHHHHhcccccccchhHHHHHHHHhccccccchhhhhhcccccceeeecCCccHHHH
Confidence 89999999777765 588999999999999999888888887776544333332221 33344455666777
Q ss_pred HHHHHhhCCCCcc-----ccccccccCCccccccccccCCc-----------------------cccCCCcccccccCCe
Q 014952 318 EDAVRAKLPHAKL-----GQGYGMTEAGPVLSMCLAFAKEP-----------------------FEIKSGACGTVVRNAE 369 (415)
Q Consensus 318 ~~~~~~~~~~~~~-----~~~YG~tE~~~~~~~~~~~~~~~-----------------------~~~~~~~~G~p~~~~~ 369 (415)
.+.+.+.|....+ .-.|+.-= ...+.+..+....+ ........|+..++++
T Consensus 1085 i~sf~klfa~igLsp~avStsys~r~-Np~Ic~r~~sg~~Pt~~y~D~raLR~grV~~ve~~ap~~l~L~dSG~~~~~~~ 1163 (1363)
T KOG3628|consen 1085 IASFKKLFAAIGLSPRAVSTSYSSRV-NPFICLRSYSGPEPTTVYLDARALREGRVRLVEVGAPHSLLLYDSGKLPVYTD 1163 (1363)
T ss_pred HHHHHHHHHHcCCChhhhcccccccC-ChHhhhccccCCCCcceeechhhhhccceeeeecCCCCccccccCCcccccce
Confidence 7777777632222 22333221 11111111111000 0111124588889999
Q ss_pred EEEEeCCCCCCCCCCCceeEEEecCccccccccC
Q 014952 370 MKIVDPDTGISLPRNQAGEICIRGAQIMKGTYHI 403 (415)
Q Consensus 370 v~i~d~~~~~~~~~g~~Gel~v~~~~~~~gY~~~ 403 (415)
+.|++||+..+|..|+.||||+.|.+-+.+|++-
T Consensus 1164 i~IvnPEtk~pc~dge~GEIW~~S~hnA~~~~~~ 1197 (1363)
T KOG3628|consen 1164 IAIVNPETKGPCRDGELGEIWVNSAHNASCSFTI 1197 (1363)
T ss_pred eEEeCCccccccccCCcceEEecccccccccccc
Confidence 9999999999999999999999999999988864
No 124
>TIGR02155 PA_CoA_ligase phenylacetate-CoA ligase. Phenylacetate-CoA ligase (PA-CoA ligase) catalyzes the first step in aromatic catabolism of phenylacetic acid (PA) into phenylacetyl-CoA (PA-CoA). Often located in a conserved gene cluster with enzymes involved in phenylacetic acid activation (paaG/H/I/J), phenylacetate-CoA ligase has been found among the proteobacteria as well as in gram positive prokaryotes. In the B-subclass proteobacterium Azoarcus evansii, phenylacetate-CoA ligase has been shown to be induced under aerobic and anaerobic growth conditions. It remains unclear however, whether this induction is due to the same enzyme or to another isoenzyme restricted to specific anaerobic growth conditions.
Probab=99.90 E-value=2.6e-23 Score=198.84 Aligned_cols=204 Identities=22% Similarity=0.229 Sum_probs=154.7
Q ss_pred CCCCeEEEecCCCCCCCCceeeechHHHHHHHhhhhcCCCCCccCCCCcEEEEccchHHHHhhHHHHHHHHHcCcEEEEc
Q 014952 180 NPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIM 259 (415)
Q Consensus 180 ~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~l~~l~~G~~~v~~ 259 (415)
..++.+.+++||||||.||++.++|.++............ .+++.++|+++...+.....+.+...+.....|++++..
T Consensus 73 ~~~~~~~~~~TSGTTG~Pk~v~~t~~~~~~~~~~~~~~~~-~~g~~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 151 (422)
T TIGR02155 73 PREQVVRIHASSGTTGKPTVVGYTQNDIDTWSSVVARSIR-AAGGRPGDLIHNAYGYGLFTGGLGAHYGAEKLGCTVVPI 151 (422)
T ss_pred ChHHcEEEEECCCCCCCCeEeccCHHHHHHHHHHHHHHHH-HcCCCCCcEEEEccCccccchhHHHHHHHHHcCcEEEec
Confidence 4567889999999999999999999998765433322111 335778899888766544333332355678889999888
Q ss_pred CCCCHHHHHHHHHhcCceeeecchHHHHHHHcCCCCCCC--CcccceeeeecCCCCCHHHHHHHHhhCCCCccccccccc
Q 014952 260 QKFDIVKLMELVQKYKVTVAPFVPPIVLAVAKSGDVDKY--DMSSIRTVMSGAAPMGKELEDAVRAKLPHAKLGQGYGMT 337 (415)
Q Consensus 260 ~~~~~~~~~~~l~~~~~t~l~~~p~~l~~l~~~~~~~~~--~l~~lr~v~~gG~~l~~~~~~~~~~~~~~~~~~~~YG~t 337 (415)
+..+++.+++.|+++++|++.++|+++..|++....... ...++|.+++||+++++++.+.+.+.| ++++++.||+|
T Consensus 152 ~~~~~~~~~~~i~~~~~t~l~~~Ps~l~~L~~~~~~~~~~~~~~~lr~i~~~ge~l~~~~~~~i~~~~-g~~v~~~YG~t 230 (422)
T TIGR02155 152 SGGQTEKQVQLIQDFKPDIIMVTPSYMLNLLEELKRMGIDPAQTSLQVGIFGAEPWTNAMRKEIEARL-GMKATDIYGLS 230 (422)
T ss_pred CCCCHHHHHHHHHHHCCCEEEEcHHHHHHHHHHHHHcCCCcccCceEEEEEeCCcCCHHHHHHHHHHh-CCceEecccch
Confidence 777889999999999999999999999988765332222 235899999999999999999999999 79999999999
Q ss_pred cCCcc-ccccccccCCccccCCCcccccc--cCCeEEEEeCCCCCCCCCCCceeEEEecC
Q 014952 338 EAGPV-LSMCLAFAKEPFEIKSGACGTVV--RNAEMKIVDPDTGISLPRNQAGEICIRGA 394 (415)
Q Consensus 338 E~~~~-~~~~~~~~~~~~~~~~~~~G~p~--~~~~v~i~d~~~~~~~~~g~~Gel~v~~~ 394 (415)
|+++. +... + . . ...|.++ +++.++|+|++++++++.|+.|||++.+.
T Consensus 231 E~~~~~~~~~---~-~--~---~~~g~~~~~~~~~~eivd~~~g~~v~~Ge~Gelvvt~~ 281 (422)
T TIGR02155 231 EVIGPGVAME---C-V--E---TQDGLHIWEDHFYPEIIDPHTGEVLPDGEEGELVFTTL 281 (422)
T ss_pred hhcCCceeec---c-c--c---cCCCceEecCeeEEEEECCCCCCCCCCCCeeEEEEecC
Confidence 98531 1111 0 0 0 1124444 35788999988899999999999999974
No 125
>TIGR03335 F390_ftsA coenzyme F390 synthetase. This enzyme, characterized in Methanobacterium thermoautotrophicum and found in several other methanogens, modifies coenzyme F420 by ligation of AMP (or GMP) from ATP (or GTP). On F420, it activates an aromatic hydroxyl group, which is unusual chemistry for an adenylyltransferase. This enzyme name has been attached to numbers of uncharacterized genes likely to instead act as phenylacetate CoA ligase, based on proximity to predicted indolepyruvate ferredoxin oxidoreductase (1.2.7.8) genes. The enzyme acts during transient exposure of the organism to oxygen.
Probab=99.88 E-value=5e-22 Score=190.27 Aligned_cols=200 Identities=20% Similarity=0.245 Sum_probs=153.2
Q ss_pred CCCCeEEEecCCCCCCCCceeeechHHHHHHHhhhhcCCCCCccCCCCcEEEEccchHHHHhhHHHHHHHHHcCcEEEEc
Q 014952 180 NPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIM 259 (415)
Q Consensus 180 ~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~l~~l~~G~~~v~~ 259 (415)
..++++.|.+||||||.||++.+||.++..........+. ..++.++|+++...|..+..+.....+.+...|++++..
T Consensus 84 ~~~~i~~i~~TSGTTG~Pk~v~~T~~dl~~~~~~~~r~~~-~~G~~~gD~vl~~~~~~~~~g~~~~~~~~~~~Ga~vi~~ 162 (445)
T TIGR03335 84 DWKDIYTIHETSGTSGTPKSFFLTWDDWKRYAEKYARSFV-SQGFTAGDRMVICASYGMNVGANTMTLAAREVGMSIIPE 162 (445)
T ss_pred CHHHeEEEEeCCCCCCCcceeeecHHHHHHHHHHHHHHHH-HcCCCCCCeEEEEecCCcchhHHHHHHHHHHcCCEEEcC
Confidence 4568889999999999999999999998766544333111 235788899999988877666554456678888887654
Q ss_pred CCCCHHHHHHHHHhcCceeeecchHHHHHHHcCCCCCCC--CcccceeeeecCCCCCHHHHHHHHhhCCCCccccccccc
Q 014952 260 QKFDIVKLMELVQKYKVTVAPFVPPIVLAVAKSGDVDKY--DMSSIRTVMSGAAPMGKELEDAVRAKLPHAKLGQGYGMT 337 (415)
Q Consensus 260 ~~~~~~~~~~~l~~~~~t~l~~~p~~l~~l~~~~~~~~~--~l~~lr~v~~gG~~l~~~~~~~~~~~~~~~~~~~~YG~t 337 (415)
. .....++.+++++++++.++|+.+..|++....... ...++|.+++||++++.++++.+.+.| ++++++.||+|
T Consensus 163 ~--~~~~~~~~i~~~~~t~l~~~ps~ll~La~~~~~~g~~~~~~~lr~ii~gGE~l~~~~r~~ie~~~-g~~v~~~YG~T 239 (445)
T TIGR03335 163 G--KCTFPIRIIESYRPTGIVASVFKLLRLARRMKAEGIDPAESSIRRLVVGGESFADESRNYVEELW-GCEVYNTYGST 239 (445)
T ss_pred C--chhHHHHHHHHhCCCEEEECHHHHHHHHHHHHHcCCCcccCcceEEEEcCCCCCHHHHHHHHHHh-CCcEEecCChh
Confidence 3 234678999999999999999988877754322221 246899999999999999999999999 89999999999
Q ss_pred cCCccccccccccCCccccCCCcccccc--cCCeEEEEeCCCCCCCCCCCceeEEEecCc
Q 014952 338 EAGPVLSMCLAFAKEPFEIKSGACGTVV--RNAEMKIVDPDTGISLPRNQAGEICIRGAQ 395 (415)
Q Consensus 338 E~~~~~~~~~~~~~~~~~~~~~~~G~p~--~~~~v~i~d~~~~~~~~~g~~Gel~v~~~~ 395 (415)
|++ +...| . ...|..+ +++.++|+|++++.+++.|+.|||++.+-.
T Consensus 240 E~~-~~~~c-----~------~~~g~h~~~d~~~vEIvDp~~~~~vp~Ge~GELvvT~L~ 287 (445)
T TIGR03335 240 EGT-MCGEC-----Q------AVAGLHVPEDLVHLDVYDPRHQRFLPDGECGRIVLTTLL 287 (445)
T ss_pred hhh-heEEe-----c------CCCCccccCCceEEEEEcCCCCCCCcCCCceEEEEEecC
Confidence 986 22222 0 1124444 457899999998899999999999998653
No 126
>TIGR02372 4_coum_CoA_lig 4-coumarate--CoA ligase, photoactive yellow protein activation family. Ectothiorhodospira halophila. This enzyme is designated 6.2.1.12 and therefore joins a number of plant enzymes linked to lignin biosynthesis and given similar names.
Probab=99.87 E-value=2.3e-21 Score=181.23 Aligned_cols=169 Identities=18% Similarity=0.128 Sum_probs=135.7
Q ss_pred CCeEEEecCCCCCCCCceeeechHHHHHHHhhhhcCCCCCccC--CCCcEEEEccchHHHHhhHHHHHHHHHcCcEEEEc
Q 014952 182 DDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYL--HKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIM 259 (415)
Q Consensus 182 ~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~--~~~~~~~~~~pl~~~~g~~~~~l~~l~~G~~~v~~ 259 (415)
+..++++|||||||.||+|.++|+++.......... ++. +..+++++.+|++|.+|+...++.++..|+++++.
T Consensus 95 ~~~~~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~----~~~~~~~~dr~l~~~Pl~h~~g~~~~~l~~l~~G~~vv~~ 170 (386)
T TIGR02372 95 PTARFTFATSGSTGTPKPVTHSWAALLSEAQAIAKI----LGERPPPVRRVISCVPAHHLYGFLFSCLLPSRRGLEAKQL 170 (386)
T ss_pred CCceEEEECCCCCCCCceeEeeHHHHHHHHHHHHHH----hCcCCCCCCeEEEeCCcHHHHHHHHHHHHHHHCCCeEEec
Confidence 568899999999999999999999999877766652 233 33468999999999999876678889999999998
Q ss_pred CCCCHHHHHHHHHhcCceeeecchHHHHHHHcCCCCCCCCcccceeeeecCCCCCHHHHHHHHhhCCCCccccccccccC
Q 014952 260 QKFDIVKLMELVQKYKVTVAPFVPPIVLAVAKSGDVDKYDMSSIRTVMSGAAPMGKELEDAVRAKLPHAKLGQGYGMTEA 339 (415)
Q Consensus 260 ~~~~~~~~~~~l~~~~~t~l~~~p~~l~~l~~~~~~~~~~l~~lr~v~~gG~~l~~~~~~~~~~~~~~~~~~~~YG~tE~ 339 (415)
+.+++..+++.++.+ |++.++|.++..+.+.. .+++++|. ++||+++++++.+.+++. +...+++.||+||+
T Consensus 171 ~~~~~~~~l~~i~~~--t~~~~~P~~l~~l~~~~----~~l~slr~-i~gGa~l~~~l~~~~~~~-g~~~v~~~YG~TEt 242 (386)
T TIGR02372 171 AAAPASGIMRHARPG--DLIVGTPFIWEQLADLD----YRLPGVVG-VSSGAPSTAATWRCLLAA-GLARLLEVYGATET 242 (386)
T ss_pred CCCChHHHHHhhccC--CEEEECcHHHHHHHhhC----cCCCccee-EecCCCCCHHHHHHHHHh-cccchhheeccccc
Confidence 888988888888654 78999999999997653 34677886 678999999999999885 23579999999999
Q ss_pred CccccccccccCCccccCCCcccccccCCeEEE
Q 014952 340 GPVLSMCLAFAKEPFEIKSGACGTVVRNAEMKI 372 (415)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~G~p~~~~~v~i 372 (415)
+++.... .++..|+|+|++++++
T Consensus 243 ~~i~~~~----------~~~~~~~~~p~~~~~~ 265 (386)
T TIGR02372 243 GGIGLRE----------APDDPFRLLPDLACFA 265 (386)
T ss_pred ccccccc----------CCCCCcccCCCccccC
Confidence 8754321 1234678889887765
No 127
>COG1541 PaaK Coenzyme F390 synthetase [Coenzyme metabolism]
Probab=99.78 E-value=4.8e-18 Score=155.37 Aligned_cols=204 Identities=24% Similarity=0.297 Sum_probs=156.6
Q ss_pred cCCCCCeEEEecCCCCCCCCceeeechHHHHHHHhhhhcCCCCCccCCCCcEEEEccchH-HHHhhHHHHHHHHHcCcEE
Q 014952 178 KINPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLF-HIYSLNSVLLCALRVGAAI 256 (415)
Q Consensus 178 ~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~-~~~g~~~~~l~~l~~G~~~ 256 (415)
....++...|-.||||||+|+.+.+++..+......+...+. ..+...+|++....-.. +..|+. .-+++-..|+++
T Consensus 86 ~~~~~~i~~ihaSSGTTGkPt~~~~t~~D~~~wa~~~aR~~~-~~g~~~gd~v~~~~~yGl~tgg~~-~~~ga~rig~~v 163 (438)
T COG1541 86 AVPKEEIVRIHASSGTTGKPTVFGYTAKDIERWAELLARSLY-SAGVRKGDKVQNAYGYGLFTGGLG-LHYGAERIGATV 163 (438)
T ss_pred cccccceEEEEccCCCCCCceeeecCHHHHHHHHHHHHHHHH-HccCCCCCEEEEEeeeccccCCch-hHHHHHhhCEEE
Confidence 345567777889999999999999999988776665555443 34566777766665421 122222 345666677777
Q ss_pred EEcCCCCHHHHHHHHHhcCceeeecchHHHHHHHcCCCCCC--CCcccceeeeecCCCCCHHHHHHHHhhCCCCcccccc
Q 014952 257 LIMQKFDIVKLMELVQKYKVTVAPFVPPIVLAVAKSGDVDK--YDMSSIRTVMSGAAPMGKELEDAVRAKLPHAKLGQGY 334 (415)
Q Consensus 257 v~~~~~~~~~~~~~l~~~~~t~l~~~p~~l~~l~~~~~~~~--~~l~~lr~v~~gG~~l~~~~~~~~~~~~~~~~~~~~Y 334 (415)
+-...-+.+..+++++.+++|++.++|+.+..|++...... ..-.++|.+++|+|++++++++.+.++| ++..++.|
T Consensus 164 ip~~~g~~~~~~~l~~df~~tvI~~tps~~l~lae~~~~~G~~~~~~~lk~~i~gaE~~see~R~~ie~~~-g~~~~diY 242 (438)
T COG1541 164 IPISGGNTERQLELMKDFKPTVIAATPSYLLYLAEEAEEEGIDPDKLSLKKGIFGAEPWSEEMRKVIENRF-GCKAFDIY 242 (438)
T ss_pred EccCCccHHHHHHHHHhcCCcEEEEChHHHHHHHHHHHHcCCChhhcceeEEEEecccCCHHHHHHHHHHh-CCceeecc
Confidence 77766688999999999999999999999999988765542 3346899999999999999999999999 99999999
Q ss_pred ccccCCccc-cccccccCCccccCCCcccccccCCeEEEEeCCCCCCCCCCCceeEEEec
Q 014952 335 GMTEAGPVL-SMCLAFAKEPFEIKSGACGTVVRNAEMKIVDPDTGISLPRNQAGEICIRG 393 (415)
Q Consensus 335 G~tE~~~~~-~~~~~~~~~~~~~~~~~~G~p~~~~~v~i~d~~~~~~~~~g~~Gel~v~~ 393 (415)
|.||..+.. .-| ......--+-++..++|+||++|+.++.|+.|||++..
T Consensus 243 GltE~~g~g~~eC---------~~~~glhi~eD~~~~Ei~dP~t~e~l~dge~GelV~T~ 293 (438)
T COG1541 243 GLTEGFGPGAGEC---------TERNGLHIWEDHFIFEIVDPETGEQLPDGERGELVITT 293 (438)
T ss_pred ccccccCCccccc---------ccccCCCcchhhceeeeecCCcCccCCCCCeeEEEEEe
Confidence 999997653 222 11111222347889999999999999999999999875
No 128
>KOG3628 consensus Predicted AMP-binding protein [General function prediction only]
Probab=99.72 E-value=1.2e-16 Score=156.32 Aligned_cols=379 Identities=17% Similarity=0.155 Sum_probs=258.5
Q ss_pred CCCCHHhHHHhhhccCCCCcEEEeCCC-C--CeeeHHHHHHHHHHHHH-HHHHcCCCCCCEEEEEcCCc--hhHHHHHHH
Q 014952 23 NHLPLHTYCFENISQFADRPCIINGPT-G--DVYTYADVELTSRKVAA-GLSKLGVQKGDVIMLLLQNC--PQFVFAFLG 96 (415)
Q Consensus 23 ~~~tl~~~l~~~a~~~p~~~a~~~~~~-~--~~~Ty~el~~~~~~~a~-~L~~~g~~~g~~V~i~~~~~--~~~~~~~lA 96 (415)
+...+...++.+-..++.+.|.+.-+. + ..+||..+..++.+.|+ .|.+-|+.++|+|.++...+ .++++..++
T Consensus 92 a~~d~~avl~~~~nhs~~~ta~i~id~kgk~~~~twdkl~~rA~k~a~~~l~ksgl~~~~~vvL~Y~~~e~ie~~isl~g 171 (1363)
T KOG3628|consen 92 ALTDIIAVLRYRRNHSATSTAHICIDKKGKATSITWDKLLNRAEKVAHVELNKSGLKPGDRVVLYYRKCEAIEFLISLFG 171 (1363)
T ss_pred hhcchHHHHHhhccCCCCCceEEEEcCCCceeeeeHHHHHHHHHhhccHHhhccCCCCCcEEEEEEEhhhhhHHhhhhcc
Confidence 345677777777777888888875532 2 58999999999999999 67778999999999999866 899999999
Q ss_pred HHHhCCeEeecCCCCCHHHHHHHHHhcCceEEEEcccchHHHHhhh-hhcCceEEEeCCCCCCccchhhhhhhcccC-CC
Q 014952 97 ASYIGATSTTANPFYTPPEIAKQAIASKAKIIITQAVYNDKVRDLS-EHHGARIVTIDPPPENCLHFSELITQADEN-EI 174 (415)
Q Consensus 97 ~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~vl~~~~~~~~~~~~~-~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~-~~ 174 (415)
|..+|.+++|+.+.++.+++...++..+..++++.......+.... +.+..+.+ .++...++ ...... ..
T Consensus 172 c~l~g~~~vp~~e~~s~~el~~i~~~~~~~~~l~t~a~~r~~~~~~~~~s~~k~v-------~~w~t~~~-k~~~~~~k~ 243 (1363)
T KOG3628|consen 172 CFLLGIVAVPLSELSSSEELKDIVNPTPERVALTTEAGERAFINDNSPVSLAKAV-------AWWKTNDF-KGNYTKDKI 243 (1363)
T ss_pred ccccceeeccchhhhhhhhhhcccCCCccceEeehhhhHHHhhhccCcccHHHHH-------Hhhhcccc-cceeehhhc
Confidence 9999999999999999999999999999999998876554433221 00000000 00111111 000000 00
Q ss_pred CcccCCCCCeEEEecCCCCCCCCceeeechHHHHHHHhhhhcCC----------------CCCccCCCCcEEEEccchHH
Q 014952 175 PAVKINPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGE----------------NPNLYLHKEDVILCVLPLFH 238 (415)
Q Consensus 175 ~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~pl~~ 238 (415)
..+...-. .++|-||.+++|.--|++.+|. +..+.+...... .-.+.....+.++....+..
T Consensus 244 ~~P~~~~~-~~~i~~t~s~l~~~~g~V~~~~-~~~q~r~~~~~~nt~Pa~~~~~~~~~~~~~v~~~~~~~~~l~~~~~s~ 321 (1363)
T KOG3628|consen 244 KKPRMQLP-YGYIEFTRSPLGNLIGVVYKHK-FLPQMRVLTSIPNTNPARFAAAFYGCLHAHVFPVPSEDVLLTNLDPSQ 321 (1363)
T ss_pred cCCceeee-eEEEEEeccchhceeeeEeecc-cccchhhhhhccCcChHHHHHhhhcchhhhccccCcccceeeccCccc
Confidence 11111112 8999999999999999999998 554443322211 01233466777888888888
Q ss_pred HHhhHHHHHHHHHcCcEEEEcCC---CCHHHHHHHHHhcCceeeecchHHHHHHHc----CC-------CCCCCCcccce
Q 014952 239 IYSLNSVLLCALRVGAAILIMQK---FDIVKLMELVQKYKVTVAPFVPPIVLAVAK----SG-------DVDKYDMSSIR 304 (415)
Q Consensus 239 ~~g~~~~~l~~l~~G~~~v~~~~---~~~~~~~~~l~~~~~t~l~~~p~~l~~l~~----~~-------~~~~~~l~~lr 304 (415)
..|++++++.++.+|.+.+.+|+ +.|..+.+++.++|++++..-...+.+... .+ +....+++++|
T Consensus 322 ~lGlilGV~~alfsg~c~i~~p~~~l~~pG~~~~l~~k~R~~~~ltd~~~Lkq~~~ny~~~p~a~~s~~k~~t~d~sslk 401 (1363)
T KOG3628|consen 322 QLGLILGVLVALFSGYCTIGCPKEVLKPPGLIANLITKYRATWSLTDYAGLKQPVYNYQEDPKATLSFKKYKTPDLSSLK 401 (1363)
T ss_pred ccchhhhhhhhhhcCceeecCchhhcCCCcchhhhhccceeEEEeecccccCcccccccCCcccccchhhccCCCcccee
Confidence 89999999999999999999987 678889999999999998776544433322 11 12235689999
Q ss_pred eeeecCCCCCHHHHHHHHhhC----C-----------------CCccccccccccCCccccccccc-c-CCc--------
Q 014952 305 TVMSGAAPMGKELEDAVRAKL----P-----------------HAKLGQGYGMTEAGPVLSMCLAF-A-KEP-------- 353 (415)
Q Consensus 305 ~v~~gG~~l~~~~~~~~~~~~----~-----------------~~~~~~~YG~tE~~~~~~~~~~~-~-~~~-------- 353 (415)
.+++.-..++.+..+....+| + |.-....=+++|.+...--.+.. . ...
T Consensus 402 ~C~Vtc~~vd~~~~~ivs~~wlk~lg~~~~~~~~~p~l~ll~hGgi~is~k~~~~~~~~~~r~p~~~~~~~~~e~ll~~~ 481 (1363)
T KOG3628|consen 402 GCMVTCTAVDTEFQEIVSDRWLKPLGETNVKVVDFPILCLLWHGGIPISFKDWMEIGTVSIRRPEQMADTLPGEGLLSKE 481 (1363)
T ss_pred eeEEeeeecchHHHHHHHHhhcccccCcCcceeechhhhhhhcCceEEEeccchhhhcccccCcccccccCccceeeecc
Confidence 999999999998887777665 0 00111122224444211111100 0 000
Q ss_pred ---------------cccCCCcccccccC-CeEEEEeCCCCCCCCCCCceeEEEecCccccccccCCcceeeee
Q 014952 354 ---------------FEIKSGACGTVVRN-AEMKIVDPDTGISLPRNQAGEICIRGAQIMKGTYHIYAPFLLSI 411 (415)
Q Consensus 354 ---------------~~~~~~~~G~p~~~-~~v~i~d~~~~~~~~~g~~Gel~v~~~~~~~gY~~~~~~~~~~~ 411 (415)
.......+|...|+ +.+.|+++++.+.|..+++|||||.++++..+||+-+.-+...|
T Consensus 482 ~L~~~~V~v~~e~~is~~s~kd~~~i~~g~~t~~vv~~~t~~LC~~~eVGEIwVsS~~~~~~~~al~~~t~~~F 555 (1363)
T KOG3628|consen 482 ALKLNEVEVDTEDDISSLSVKDVLCIMPGDATLAVVNPDTNQLCKTDEVGEIWVSSNSLGKLFYALDKQTENTF 555 (1363)
T ss_pred ccccceEEEcchhhhhhcCccccceecccceEEEEeCCCcccccccCcceeEEEecCCcccceeeccccccceE
Confidence 00112345665655 46778899999999999999999999999999999776665554
No 129
>KOG1178 consensus Non-ribosomal peptide synthetase/alpha-aminoadipate reductase and related enzymes [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.64 E-value=3.9e-15 Score=149.63 Aligned_cols=307 Identities=18% Similarity=0.194 Sum_probs=199.6
Q ss_pred CCHHhHHHhhhccCCCCcEEEeCCC------CCeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHH
Q 014952 25 LPLHTYCFENISQFADRPCIINGPT------GDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGAS 98 (415)
Q Consensus 25 ~tl~~~l~~~a~~~p~~~a~~~~~~------~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~ 98 (415)
.++.+.+.+.+...|...+..+-.. -..+||++....++.+++.|...|...|+.|++++..+.++++..++++
T Consensus 36 g~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~i~~~t~r~~~~~~n~~~q~l~~~~~~~~~~v~i~~~~~~d~~v~v~~~~ 115 (1032)
T KOG1178|consen 36 GTLEDSFRRELAEAPENTGHVIIPTASESGIIDSFTYRLIRLLSNIIAQFLVSLGSLRGTTVAIYMLPSVDLVVSVFAVL 115 (1032)
T ss_pred cchhhHHHHHHhhcccCCCceEeecccccccccchhhhhhhcccchhHHHhhhcccccCceEEEeccCcCCeeeeeeehh
Confidence 4666778888888887777753321 2689999999999999999999999999999999999999999999999
Q ss_pred HhCCeEeecCCCCC----HHHHHHHHHh-cCceEEEEcccchHHHHhhhhhcCceEEEeCCCCCCccchhhhhhhcccCC
Q 014952 99 YIGATSTTANPFYT----PPEIAKQAIA-SKAKIIITQAVYNDKVRDLSEHHGARIVTIDPPPENCLHFSELITQADENE 173 (415)
Q Consensus 99 ~~G~~~v~l~~~~~----~~~~~~~l~~-~~~~~vl~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~ 173 (415)
++|..+++++|.++ .+.+..+... .....-+......- ........+...++. ....++.+ ......
T Consensus 116 ~~g~~~~~idp~~~~~e~~~~~~~ia~~~~s~~~~i~~~l~i~---~~~~~~~~~~~sv~~---~~~~f~~~--~~~~~~ 187 (1032)
T KOG1178|consen 116 AAGLTFLPIDPSWPNSELAGYLMRIAHFLTSVELEIVRRLNII---DILLNSLFPKLSVET---IADSFQMV--LHNEDT 187 (1032)
T ss_pred hcceEEEEecCCCcccccchHHHhhhhhheeccceehhhhhhH---HHHhhccccccchhh---ccchhhhh--hccCCC
Confidence 99999999999998 3322222111 11111111111000 000000011111110 01112222 111112
Q ss_pred CCcccCCCCCeEEEecCCCCCCCCceeeechHHHHHHHhhhhcCCCCCccCCCCcEEEEccc-h-HHHHhhHHHHHHHHH
Q 014952 174 IPAVKINPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLP-L-FHIYSLNSVLLCALR 251 (415)
Q Consensus 174 ~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p-l-~~~~g~~~~~l~~l~ 251 (415)
.......++..+++.||||+||.||+|..+|..+.+...|... .+.....++. ...+ . ++..-.. .+-..+.
T Consensus 188 r~~~~~~~ds~~~l~~tSgs~G~pk~v~~~~~sl~~~fdw~~~----~f~~t~s~~~-~~~~~~~~~d~i~~-~~~~~L~ 261 (1032)
T KOG1178|consen 188 REIRVGGNDSTALLSFTSGSTGVPKGVAGTHFSLANAFDWMFT----TFPPTGSDRF-TFKTSVYFDDTIQK-FIGALLF 261 (1032)
T ss_pred cceeeecccccceEeecccccccccccchhHHHHHhhhhhccc----cCCcCccchh-hhhheeecccchHH-HHhhHhh
Confidence 2233456788999999999999999999999999998887776 3455666654 2222 1 2211111 2334445
Q ss_pred cCcEEEEcCC---CCHHHHHHHHHhcCceeeecchHHHHHHHcCCCCC-------------CCCcccceeeeecCCCCCH
Q 014952 252 VGAAILIMQK---FDIVKLMELVQKYKVTVAPFVPPIVLAVAKSGDVD-------------KYDMSSIRTVMSGAAPMGK 315 (415)
Q Consensus 252 ~G~~~v~~~~---~~~~~~~~~l~~~~~t~l~~~p~~l~~l~~~~~~~-------------~~~l~~lr~v~~gG~~l~~ 315 (415)
.|..+..+.. .++..+.+.+++++++..+.+|.+.++++...... ....+.||....+|++...
T Consensus 262 ~~~~l~~p~~~~~~~~~~l~~~le~y~i~~~~~~~a~~~~l~~~~~~~~~~l~~~~~~~dl~~~~~~Lkl~~~~~ep~~v 341 (1032)
T KOG1178|consen 262 NGNNLLVPTATIKDTPGQLASTLERYGITVSHLLPAMCQLLLAILTTSLPLLEHAFSLSDLLTKRSCLKLVVLGGEPLLV 341 (1032)
T ss_pred cCceeecccccCccchhhHHHHHHhhhheeeeechhhhhhhhhhcCcchhhhhhhhhcccccccchhheeeeecCCccch
Confidence 5554555433 34789999999999999999999987777654321 1113479999999999999
Q ss_pred HHHHHHHhhCCCCccccccccccCCccccc
Q 014952 316 ELEDAVRAKLPHAKLGQGYGMTEAGPVLSM 345 (415)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~ 345 (415)
.+...+...+...-+..-|+.++..+..+.
T Consensus 342 ~l~~s~~~~~~~~~~~~~y~s~~~~~~~s~ 371 (1032)
T KOG1178|consen 342 SLYTSTFDLLAEIFFGLPYLSTDPTGLVSY 371 (1032)
T ss_pred hhhhhhhhcccceeeeecccCCCCccceeH
Confidence 988866666533333445888888765444
No 130
>TIGR02304 aden_form_hyp probable adenylate-forming enzyme. Members of this family form a distinct clade within a larger family of proteins that also includes coenzyme F390 synthetase, an enzyme known in Methanobacterium thermoautotrophicum and a few other methanogenic archaea. That enzyme adenylates coenzyme F420 to F390, a reversible process, during oxygen stress. Other informative homologies include domains of the non-ribosomal peptide synthetases involved in activation by adenylation. The family defined by this model is likely to be of an adenylate-forming enzyme related to but distinct from coenzyme F390 synthetase.
Probab=99.29 E-value=5.2e-11 Score=112.12 Aligned_cols=149 Identities=14% Similarity=0.072 Sum_probs=102.5
Q ss_pred eEEEecCCCCCCCCceeeechHHHHHHHhhhhcCCCCCccCCCCcEEEEccch-HHHHhhHHHHHHHHHcCcE-EEEcC-
Q 014952 184 VVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPL-FHIYSLNSVLLCALRVGAA-ILIMQ- 260 (415)
Q Consensus 184 ~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pl-~~~~g~~~~~l~~l~~G~~-~v~~~- 260 (415)
-..+..||||||.|-.+..+..............+. ..++..++++...+.- .+. +..+..... +-..+
T Consensus 101 ~~~v~~TSGSSG~p~~f~~~~~~~~~~~a~~~~~~~-~~g~~~g~r~a~~~~~~~~l-------y~~~~~~~~~~~~~~l 172 (430)
T TIGR02304 101 NISVGLSSGTSGRRGLFVVSPEEQQMWAGGILAKVL-PDGLFAKHRIAFFLRADNNL-------YQSVNNRWISLDFFDL 172 (430)
T ss_pred cEEEEECCCCCCCceEEEECHHHHHHHHHHHHhhhC-ccccccCCcEEEEEccChhH-------HHHHHhccceeeecCC
Confidence 345667999999999999999877544333322221 2234444554444211 111 122222111 12221
Q ss_pred CCCHHHHHHHHHhcCceeeecchHHHHHHHcCCCCCCCCcccceeeeecCCCCCHHHHHHHHhhCCCCccccccccccCC
Q 014952 261 KFDIVKLMELVQKYKVTVAPFVPPIVLAVAKSGDVDKYDMSSIRTVMSGAAPMGKELEDAVRAKLPHAKLGQGYGMTEAG 340 (415)
Q Consensus 261 ~~~~~~~~~~l~~~~~t~l~~~p~~l~~l~~~~~~~~~~l~~lr~v~~gG~~l~~~~~~~~~~~~~~~~~~~~YG~tE~~ 340 (415)
..+.+..++.|++++|+++.++|+.+..|++.......+ .++|.++++||+++++..+.+++.| ++++++.||+|| |
T Consensus 173 ~~~~~~~l~~L~~~~P~~L~g~pS~l~~LA~~~~~~~l~-~~~k~ii~~~E~l~~~~r~~Ie~~f-g~~V~~~YG~tE-g 249 (430)
T TIGR02304 173 LAPFQAHIKRLNQRKPSIIVAPPSVLRALALEVMEGELT-IKPKKVISVAEVLEPQDRELIRNVF-KNTVHQIYQATE-G 249 (430)
T ss_pred CcCHHHHHHHHHHhCCCEEEEcHHHHHHHHHHHHhcCCC-CCceEEEEccCCCCHHHHHHHHHHh-CCCeeEccCCch-h
Confidence 246889999999999999999999999998864433333 4789999999999999999999999 899999999999 5
Q ss_pred ccc
Q 014952 341 PVL 343 (415)
Q Consensus 341 ~~~ 343 (415)
.+.
T Consensus 250 ~la 252 (430)
T TIGR02304 250 FLA 252 (430)
T ss_pred heE
Confidence 443
No 131
>PF04443 LuxE: Acyl-protein synthetase, LuxE; InterPro: IPR007534 LuxE is an acyl-protein synthetase found in bioluminescent bacteria. LuxE catalyses the formation of an acyl-protein thiolester from a fatty acid and a protein. This is the second step in the bioluminescent fatty acid reduction system, which converts tetradecanoic acid to the aldehyde substrate of the luciferase-catalysed bioluminescence reaction []. A conserved cysteine found at position 364 in Photobacterium phosphoreum LuxE (Q52100 from SWISSPROT) is thought to be acylated during the transfer of the acyl group from the synthetase subunit to the reductase. The C-terminal of the synthetase is though to act as a flexible arm to transfer acyl groups between the sites of activation and reduction []. A LuxE domain is also found in the Vibrio cholerae RBFN protein (Q06961 from SWISSPROT), which is involved in the biosynthesis of the O-antigen component 3-deoxy-L-glycero-tetronic acid. This entry represents the LuxE domain, which is found in archaeal and bacterial proteins.; GO: 0047474 long-chain fatty acid luciferin component ligase activity, 0008218 bioluminescence
Probab=99.03 E-value=8e-09 Score=95.18 Aligned_cols=204 Identities=18% Similarity=0.169 Sum_probs=121.3
Q ss_pred CCCCeEEEecCCCCCCCCceeeechHHHHHHHhhhhcCCCCCccCCCCcE-EEEccchHH---HHhh-HHHHHHHHHcCc
Q 014952 180 NPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDV-ILCVLPLFH---IYSL-NSVLLCALRVGA 254 (415)
Q Consensus 180 ~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~pl~~---~~g~-~~~~l~~l~~G~ 254 (415)
..+++..++.||||||.|--+.+.+..+..+.......+........... ++...|-.. ..+. ....+.....+.
T Consensus 87 ~~e~~~~~~tSSGTtG~~S~i~~D~~t~~~~~~~~~~~~~~~~~~~~~~~~il~l~p~~~~~~~~~~~~~~~~~~~~~~~ 166 (365)
T PF04443_consen 87 PEEEVEKVFTSSGTTGQPSRIFRDRETAERQQKSLNKIFQHFLGPSRLPMLILDLSPSPENRNSFSARYAGILGELFFGS 166 (365)
T ss_pred ChhhheeEEECCCCCCCCcEEEECHHHHHHHHHHHHHHHHhhcccccCCeEEEEecCCcccccchHHHHHHHHhhcccCc
Confidence 45667788999999999877777766565544333322211112222222 222233211 1111 112233344555
Q ss_pred EEEEcC-CCCHHHHHHHH----HhcCceeeecchHHHHHHHcCCCCCC--CCcc-cceeeeecC------CCCC-HHHHH
Q 014952 255 AILIMQ-KFDIVKLMELV----QKYKVTVAPFVPPIVLAVAKSGDVDK--YDMS-SIRTVMSGA------APMG-KELED 319 (415)
Q Consensus 255 ~~v~~~-~~~~~~~~~~l----~~~~~t~l~~~p~~l~~l~~~~~~~~--~~l~-~lr~v~~gG------~~l~-~~~~~ 319 (415)
...+-. .++...+.+.+ .+.++..+++.|.++..++...+... ..|+ ..+.+..|| +.++ .+..+
T Consensus 167 ~~~l~~~~ld~~~~~~~L~~~~~~~~pv~l~Gftf~~~~~~~~l~~~~~~~~L~~~s~vi~~GGwK~~~~e~v~r~ef~~ 246 (365)
T PF04443_consen 167 RFALDNDELDLEGLIEALFRAEHSGEPVLLFGFTFFIWFLLDELEERGIRFRLPKGSIVIHGGGWKGRRKEAVSREEFYA 246 (365)
T ss_pred eeeecCCccCHHHHHHHHHHHHhCCCCEEEECchHHHHHHHHHHHhcCCcccCCCCCEEEeCCCCCccccCccCHHHHHH
Confidence 533322 35666666655 45679999999987776665433222 3444 466777776 4565 58888
Q ss_pred HHHhhCCCC----ccccccccccCCccccccccccCCccccCCCcccccccCCeEEEEeCCCCCCCCCCCceeEEEecCc
Q 014952 320 AVRAKLPHA----KLGQGYGMTEAGPVLSMCLAFAKEPFEIKSGACGTVVRNAEMKIVDPDTGISLPRNQAGEICIRGAQ 395 (415)
Q Consensus 320 ~~~~~~~~~----~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~G~p~~~~~v~i~d~~~~~~~~~g~~Gel~v~~~~ 395 (415)
.+.+.| |+ .+++.||+||......-+ +.--++.|-. |.|+||+|.++|+.|++|-|.+-++.
T Consensus 247 ~l~~~~-Gv~~~~~i~~~ygmtEl~s~~~~~------------~~~~~~~p~w-V~iRDp~tl~~~~~Ge~Gli~vidl~ 312 (365)
T PF04443_consen 247 RLQEVF-GVIPIENIYDMYGMTELNSQAYEC------------GHGHFHVPPW-VIIRDPETLEPLPPGETGLIQVIDLA 312 (365)
T ss_pred HHHHHH-CCCCHHHeeeeeeccccchhheeC------------CCCcccCCCe-EEEECCCCCcCCCCCCeeEEEEEccc
Confidence 888889 55 688999999987432222 1111233333 78889999999999999999888764
Q ss_pred cc
Q 014952 396 IM 397 (415)
Q Consensus 396 ~~ 397 (415)
..
T Consensus 313 ~~ 314 (365)
T PF04443_consen 313 NT 314 (365)
T ss_pred cc
Confidence 33
No 132
>COG1541 PaaK Coenzyme F390 synthetase [Coenzyme metabolism]
Probab=95.39 E-value=0.16 Score=47.91 Aligned_cols=91 Identities=23% Similarity=0.154 Sum_probs=75.1
Q ss_pred eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCc--hhHHHHHHHHHHhCCeEeecCCCCCHHHHHHHHHhcCceEEE
Q 014952 52 VYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNC--PQFVFAFLGASYIGATSTTANPFYTPPEIAKQAIASKAKIII 129 (415)
Q Consensus 52 ~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~--~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~vl 129 (415)
-+|+.|....+..+|+.|...|..+||+|.++..-+ ..-+-..+|+.++|++++|+.+. ..+....++.+.++.++.
T Consensus 109 ~~t~~D~~~wa~~~aR~~~~~g~~~gd~v~~~~~yGl~tgg~~~~~ga~rig~~vip~~~g-~~~~~~~l~~df~~tvI~ 187 (438)
T COG1541 109 GYTAKDIERWAELLARSLYSAGVRKGDKVQNAYGYGLFTGGLGLHYGAERIGATVIPISGG-NTERQLELMKDFKPTVIA 187 (438)
T ss_pred ecCHHHHHHHHHHHHHHHHHccCCCCCEEEEEeeeccccCCchhHHHHHhhCEEEEccCCc-cHHHHHHHHHhcCCcEEE
Confidence 489999999999999999999999999988877611 22267789999999999999884 456667899999999999
Q ss_pred EcccchHHHHhhhh
Q 014952 130 TQAVYNDKVRDLSE 143 (415)
Q Consensus 130 ~~~~~~~~~~~~~~ 143 (415)
+.....-.+.+...
T Consensus 188 ~tps~~l~lae~~~ 201 (438)
T COG1541 188 ATPSYLLYLAEEAE 201 (438)
T ss_pred EChHHHHHHHHHHH
Confidence 99887666555443
No 133
>PLN02247 indole-3-acetic acid-amido synthetase
Probab=94.75 E-value=3 Score=41.55 Aligned_cols=42 Identities=7% Similarity=-0.152 Sum_probs=29.6
Q ss_pred cccceeeeecCCCCCHHHHHHHHhhCCCCccc-cccccccCCc
Q 014952 300 MSSIRTVMSGAAPMGKELEDAVRAKLPHAKLG-QGYGMTEAGP 341 (415)
Q Consensus 300 l~~lr~v~~gG~~l~~~~~~~~~~~~~~~~~~-~~YG~tE~~~ 341 (415)
.|++|.|.+-..--......+++..+++.++. ..|++||+-.
T Consensus 292 WP~lk~I~~~~tGsm~~Y~~~L~~y~gglpl~s~~Y~sSE~~~ 334 (606)
T PLN02247 292 WPRTKYIEVIVTGSMAQYIPTLEFYSGGLPLVSTMYASSECYF 334 (606)
T ss_pred CCCCcEEEEECCCCHHHHHHHHHHHcCCCceecccccccceEE
Confidence 57888777644444566667777777777765 5799999754
No 134
>PLN02620 indole-3-acetic acid-amido synthetase
Probab=93.31 E-value=2.4 Score=42.16 Aligned_cols=42 Identities=10% Similarity=-0.137 Sum_probs=29.1
Q ss_pred cccceeeeecCCCCCHHHHHHHHhhCCCCccc-cccccccCCc
Q 014952 300 MSSIRTVMSGAAPMGKELEDAVRAKLPHAKLG-QGYGMTEAGP 341 (415)
Q Consensus 300 l~~lr~v~~gG~~l~~~~~~~~~~~~~~~~~~-~~YG~tE~~~ 341 (415)
.+++|.|.+-..--.......++..+++.++. ..|++||+-.
T Consensus 303 WP~lk~I~~~~tGsm~~Y~p~L~~y~gglpl~~~~Y~ASE~~~ 345 (612)
T PLN02620 303 WPNTKYVDVIVTGTMSQYIPTLDYYSNGLPLVCTMYASSECYF 345 (612)
T ss_pred CCCCcEEEEECCCCHHHHHHHHHHHcCCCccccccccccceEE
Confidence 57888766644444556667777777777764 5799999754
No 135
>TIGR03335 F390_ftsA coenzyme F390 synthetase. This enzyme, characterized in Methanobacterium thermoautotrophicum and found in several other methanogens, modifies coenzyme F420 by ligation of AMP (or GMP) from ATP (or GTP). On F420, it activates an aromatic hydroxyl group, which is unusual chemistry for an adenylyltransferase. This enzyme name has been attached to numbers of uncharacterized genes likely to instead act as phenylacetate CoA ligase, based on proximity to predicted indolepyruvate ferredoxin oxidoreductase (1.2.7.8) genes. The enzyme acts during transient exposure of the organism to oxygen.
Probab=89.08 E-value=4.8 Score=38.96 Aligned_cols=82 Identities=13% Similarity=0.049 Sum_probs=62.7
Q ss_pred CeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchh--HHHHHHHHHHhCCeEeecCCCCCHHHHHHHHHhcCceEE
Q 014952 51 DVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQ--FVFAFLGASYIGATSTTANPFYTPPEIAKQAIASKAKII 128 (415)
Q Consensus 51 ~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~--~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~v 128 (415)
..+|..++...+...+..+...|+++||++.+..+.+.. .....+++...|+.+++... ......++.+.++.++
T Consensus 104 v~~T~~dl~~~~~~~~r~~~~~G~~~gD~vl~~~~~~~~~g~~~~~~~~~~~Ga~vi~~~~---~~~~~~~i~~~~~t~l 180 (445)
T TIGR03335 104 FFLTWDDWKRYAEKYARSFVSQGFTAGDRMVICASYGMNVGANTMTLAAREVGMSIIPEGK---CTFPIRIIESYRPTGI 180 (445)
T ss_pred eeecHHHHHHHHHHHHHHHHHcCCCCCCeEEEEecCCcchhHHHHHHHHHHcCCEEEcCCc---hhHHHHHHHHhCCCEE
Confidence 357999999888888888888899999999998875532 23456788899998876653 2345678889999998
Q ss_pred EEcccch
Q 014952 129 ITQAVYN 135 (415)
Q Consensus 129 l~~~~~~ 135 (415)
+......
T Consensus 181 ~~~ps~l 187 (445)
T TIGR03335 181 VASVFKL 187 (445)
T ss_pred EECHHHH
Confidence 8766543
No 136
>TIGR02155 PA_CoA_ligase phenylacetate-CoA ligase. Phenylacetate-CoA ligase (PA-CoA ligase) catalyzes the first step in aromatic catabolism of phenylacetic acid (PA) into phenylacetyl-CoA (PA-CoA). Often located in a conserved gene cluster with enzymes involved in phenylacetic acid activation (paaG/H/I/J), phenylacetate-CoA ligase has been found among the proteobacteria as well as in gram positive prokaryotes. In the B-subclass proteobacterium Azoarcus evansii, phenylacetate-CoA ligase has been shown to be induced under aerobic and anaerobic growth conditions. It remains unclear however, whether this induction is due to the same enzyme or to another isoenzyme restricted to specific anaerobic growth conditions.
Probab=89.02 E-value=4.3 Score=38.90 Aligned_cols=88 Identities=22% Similarity=0.158 Sum_probs=66.4
Q ss_pred eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCch--hHHHHHHHHHHhCCeEeecCCCCCHHHHHHHHHhcCceEEE
Q 014952 52 VYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCP--QFVFAFLGASYIGATSTTANPFYTPPEIAKQAIASKAKIII 129 (415)
Q Consensus 52 ~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~--~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~vl 129 (415)
.+|..++......++..+...|+++||++........ ......++....|+.+++++... .+.+...+++.++.+++
T Consensus 94 ~~t~~~~~~~~~~~~~~~~~~g~~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~~i~~~~~t~l~ 172 (422)
T TIGR02155 94 GYTQNDIDTWSSVVARSIRAAGGRPGDLIHNAYGYGLFTGGLGAHYGAEKLGCTVVPISGGQ-TEKQVQLIQDFKPDIIM 172 (422)
T ss_pred ccCHHHHHHHHHHHHHHHHHcCCCCCcEEEEccCccccchhHHHHHHHHHcCcEEEecCCCC-HHHHHHHHHHHCCCEEE
Confidence 4688888777777777787789999998887665432 22334677888999999887654 57788999999999999
Q ss_pred EcccchHHHHh
Q 014952 130 TQAVYNDKVRD 140 (415)
Q Consensus 130 ~~~~~~~~~~~ 140 (415)
........+..
T Consensus 173 ~~Ps~l~~L~~ 183 (422)
T TIGR02155 173 VTPSYMLNLLE 183 (422)
T ss_pred EcHHHHHHHHH
Confidence 98877655443
No 137
>PF00501 AMP-binding: AMP-binding enzyme; InterPro: IPR000873 A number of prokaryotic and eukaryotic enzymes, which appear to act via an ATP-dependent covalent binding of AMP to their substrate, share a region of sequence similarity [, , ]. This region is a Ser/Thr/Gly-rich domain that is further characterised by a conserved Pro-Lys-Gly triplet. The family of enzymes includes luciferase, long chain fatty acid Co-A ligase, acetyl-CoA synthetase and various other closely-related synthetases.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 2V7B_A 2Y4O_B 2VSQ_A 3L8C_B 1RY2_A 3KXW_A 3LNV_A 3ETC_B 3A9U_A 3A9V_A ....
Probab=84.28 E-value=4.1 Score=38.71 Aligned_cols=92 Identities=22% Similarity=0.236 Sum_probs=70.3
Q ss_pred CCCCCeEEEecCCCCCCCCceeeechHHHHHHHhhhhcCCCCCccCCCCcEEEEccchHHHHhhHHHHHHHHHcCcEEEE
Q 014952 179 INPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILI 258 (415)
Q Consensus 179 ~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~l~~l~~G~~~v~ 258 (415)
..++.+|++. -....+|...+...+......+. ..++++++++....+-+..+ ...+++++..|+..+.
T Consensus 7 ~~pd~~a~~~--------~~~~~~Ty~~l~~~v~~la~~L~-~~g~~~~~~V~i~~~n~~~~--~~~~~A~~~~G~~~v~ 75 (417)
T PF00501_consen 7 RYPDRIALID--------DEGRSLTYKQLYERVRKLAAALR-KLGVKKGDRVAILLPNSIEF--VVAFLACLRAGAIPVP 75 (417)
T ss_dssp HSTTSEEEEE--------TTTEEEEHHHHHHHHHHHHHHHH-HTTSSTTSEEEEEESSSHHH--HHHHHHHHHTT-EEEE
T ss_pred hCCCceEEEE--------CCCEEEEHHHHHHHHHHHhhHHH-HhCCCccccccccCCcccee--eeeecccccccccccc
Confidence 3578888876 24567788888887777666554 45778899988888876433 3358899999999999
Q ss_pred cCC-CCHHHHHHHHHhcCceeeec
Q 014952 259 MQK-FDIVKLMELVQKYKVTVAPF 281 (415)
Q Consensus 259 ~~~-~~~~~~~~~l~~~~~t~l~~ 281 (415)
+++ .....+...+++.++++++.
T Consensus 76 l~~~~~~~~~~~~l~~~~~~~ii~ 99 (417)
T PF00501_consen 76 LDPSLSEDELRHILRQSGPKVIIT 99 (417)
T ss_dssp EETTSSHHHHHHHHHHHTESEEEE
T ss_pred cccccccccccccccccceeEEEE
Confidence 864 68889999999999999995
No 138
>KOG1177 consensus Long chain fatty acid acyl-CoA ligase [Lipid transport and metabolism]
Probab=83.65 E-value=6.6 Score=37.52 Aligned_cols=110 Identities=18% Similarity=0.208 Sum_probs=82.2
Q ss_pred ceeeechHHHHHHHhhhhcCCCCCccCCCCcEEEEccchHHHHhhHHHHHHHHHcCcEEEEcCC-CCHHHHHHHHHhcCc
Q 014952 198 KGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIMQK-FDIVKLMELVQKYKV 276 (415)
Q Consensus 198 K~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~l~~l~~G~~~v~~~~-~~~~~~~~~l~~~~~ 276 (415)
.++..|-+.+...+..+...+. .+++.++|++..+.|-+.-.-+ +.+++-.+|..++...+ +...++.=.|++.++
T Consensus 74 eg~R~Tf~~~~~ev~slAaGll-~lGL~kGDrVgvwgpN~~~w~l--~~lA~A~AG~v~v~~NP~Yq~~elr~~L~k~~~ 150 (596)
T KOG1177|consen 74 EGIRLTFSEFVSEVESLAAGLL-SLGLKKGDRVGVWGPNSYEWVL--CQLACARAGLVLVNLNPAYQSEELRYVLKKVGC 150 (596)
T ss_pred ccchhhHHHHHHHHHHHHhhHH-hhcCCCCCEEEEecCChHHHHH--HHHHHHHhceEEeccCcccccHHHHHHHhhcCe
Confidence 4667888888887777766554 6789999999999988764433 47888889998888754 566777778999999
Q ss_pred eeeecchHHH-----HHHHc---------CCCCCCCCcccceeeeecC
Q 014952 277 TVAPFVPPIV-----LAVAK---------SGDVDKYDMSSIRTVMSGA 310 (415)
Q Consensus 277 t~l~~~p~~l-----~~l~~---------~~~~~~~~l~~lr~v~~gG 310 (415)
..++..|.+. +.+.+ .+..+...|+.|+.++..+
T Consensus 151 k~l~~p~~~k~~ny~~~l~~icPEv~~~~~G~lkS~~lp~lthvi~~~ 198 (596)
T KOG1177|consen 151 KALFAPPQFKTQNYYETLLEICPEVMRGDPGQLKSELLPELTHVILAD 198 (596)
T ss_pred EEEEccchhhhchHHHHHHHhhHHhhcCCCccccccccccceEEEecC
Confidence 9999888653 23332 1234456788999988876
No 139
>TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG. This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases.
Probab=82.73 E-value=20 Score=32.18 Aligned_cols=91 Identities=15% Similarity=0.126 Sum_probs=59.9
Q ss_pred HHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHHhCCeEeecCCCC----CHHHHHHHHHhcCceEEEEccc-c
Q 014952 60 LTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGATSTTANPFY----TPPEIAKQAIASKAKIIITQAV-Y 134 (415)
Q Consensus 60 ~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~----~~~~~~~~l~~~~~~~vl~~~~-~ 134 (415)
.|+..+|..|++.| ..|.+++......+.. .+...|..+..++-.. ..+++...++..+++++++|.- .
T Consensus 18 ~Rcl~LA~~l~~~g----~~v~f~~~~~~~~~~~--~i~~~g~~v~~~~~~~~~~~d~~~~~~~l~~~~~d~vV~D~y~~ 91 (279)
T TIGR03590 18 MRCLTLARALHAQG----AEVAFACKPLPGDLID--LLLSAGFPVYELPDESSRYDDALELINLLEEEKFDILIVDHYGL 91 (279)
T ss_pred HHHHHHHHHHHHCC----CEEEEEeCCCCHHHHH--HHHHcCCeEEEecCCCchhhhHHHHHHHHHhcCCCEEEEcCCCC
Confidence 46788999997754 4566776665454433 3357788777775432 2346888888899999999874 3
Q ss_pred hHHHHhhhhhcCceEEEeCCCC
Q 014952 135 NDKVRDLSEHHGARIVTIDPPP 156 (415)
Q Consensus 135 ~~~~~~~~~~~~~~~i~~~~~~ 156 (415)
.............+++++|+..
T Consensus 92 ~~~~~~~~k~~~~~l~~iDD~~ 113 (279)
T TIGR03590 92 DADWEKLIKEFGRKILVIDDLA 113 (279)
T ss_pred CHHHHHHHHHhCCeEEEEecCC
Confidence 3333444444567888888754
No 140
>PRK07656 long-chain-fatty-acid--CoA ligase; Validated
Probab=80.22 E-value=20 Score=35.19 Aligned_cols=100 Identities=15% Similarity=0.116 Sum_probs=71.8
Q ss_pred CCCCcEEEeCCCC-------CeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCc--hhHHHHHHHHHHhCCeEeecC
Q 014952 38 FADRPCIINGPTG-------DVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNC--PQFVFAFLGASYIGATSTTAN 108 (415)
Q Consensus 38 ~p~~~a~~~~~~~-------~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~--~~~~~~~lA~~~~G~~~v~l~ 108 (415)
.++.++++...++ ..+|+..+...+..+...+ +++++|++....+-. ..+...+++++..|+.+++.
T Consensus 164 ~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~G~~~~~~- 239 (513)
T PRK07656 164 DPDDVADILFTSGTTGRPKGAMLTHRQLLSNAADWAEYL---GLTEGDRYLAANPFFHVFGYKAGVNAPLMRGATILPL- 239 (513)
T ss_pred CCCceEEEEeCCCCCCCCCEEEEecHHHHHHHHHHHHhh---CCCCCCeEEEccchHHHHHHHHHHHHHHHcCceEEec-
Confidence 3456676644332 3689998876665554443 788999988887753 33445678889999988775
Q ss_pred CCCCHHHHHHHHHhcCceEEEEcccchHHHHhh
Q 014952 109 PFYTPPEIAKQAIASKAKIIITQAVYNDKVRDL 141 (415)
Q Consensus 109 ~~~~~~~~~~~l~~~~~~~vl~~~~~~~~~~~~ 141 (415)
+..+.+.+...+.+.++.++.........+...
T Consensus 240 ~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~ 272 (513)
T PRK07656 240 PVFDPDEVFRLIETERITVLPGPPTMYNSLLQH 272 (513)
T ss_pred CcCCHHHHHHHHHHhCCeEEechHHHHHHHHcC
Confidence 556788999999999999999888776665443
No 141
>PLN03052 acetate--CoA ligase; Provisional
Probab=79.94 E-value=13 Score=38.61 Aligned_cols=101 Identities=16% Similarity=0.199 Sum_probs=74.3
Q ss_pred CCCCeEEEecCCCCCCCCceeeechHHHHHHHhhhhcCCCCCccCCCCcEEEEccchHHHHhhHHHHHHHHHcCcEEEEc
Q 014952 180 NPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIM 259 (415)
Q Consensus 180 ~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~l~~l~~G~~~v~~ 259 (415)
.++.+|++.-..+..+.+ ...+|...+...+..+...+. ..+..++|++..++|..--+-. .+++++..|+..+.+
T Consensus 188 ~pd~~Ai~~~~e~~~~~~-~~~~Ty~eL~~~v~~lA~~L~-~~Gv~~GdrVai~~pn~~e~vi--a~LA~~~~Gav~vpi 263 (728)
T PLN03052 188 TDDSIAIIWRDEGSDDLP-VNRMTLSELRSQVSRVANALD-ALGFEKGDAIAIDMPMNVHAVI--IYLAIILAGCVVVSI 263 (728)
T ss_pred CCCCeEEEEECCCCCCCc-eEEeeHHHHHHHHHHHHHHHH-HcCCCCCCEEEEEeCCCHHHHH--HHHHHHHcCCEEEee
Confidence 457777765433321222 345799999877776666544 4578999999999987654333 578999999998887
Q ss_pred C-CCCHHHHHHHHHhcCceeeecchH
Q 014952 260 Q-KFDIVKLMELVQKYKVTVAPFVPP 284 (415)
Q Consensus 260 ~-~~~~~~~~~~l~~~~~t~l~~~p~ 284 (415)
+ .+.++.+...++..++.+++....
T Consensus 264 ~p~~~~~~l~~rl~~~~~k~lit~d~ 289 (728)
T PLN03052 264 ADSFAPSEIATRLKISKAKAIFTQDV 289 (728)
T ss_pred CCCCCHHHHHHHHHhcCceEEEEcCc
Confidence 5 588999999999999999987654
No 142
>PTZ00237 acetyl-CoA synthetase; Provisional
Probab=78.23 E-value=15 Score=37.56 Aligned_cols=97 Identities=16% Similarity=0.132 Sum_probs=72.8
Q ss_pred CCCeEEEecCCCCCCCCceeeechHHHHHHHhhhhcCCCCCccCCCCcEEEEccchHHHHhhHHHHHHHHHcCcEEEEcC
Q 014952 181 PDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIMQ 260 (415)
Q Consensus 181 ~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~l~~l~~G~~~v~~~ 260 (415)
++.+|++.-..+. + ....+|.+.+...+..+...+. ..++.++|++..++|..--+-. .+++++..|+..+.+.
T Consensus 75 ~~~~A~~~~~~~~-~--~~~~~Ty~eL~~~v~~lA~~L~-~~Gv~~GDrV~i~~~n~~e~~~--~~lA~~~~Gav~vpl~ 148 (647)
T PTZ00237 75 RDQDALIYECPYL-K--KTIKLTYYQLYEKVCEFSRVLL-NLNISKNDNVLIYMANTLEPLI--AMLSCARIGATHCVLF 148 (647)
T ss_pred CCceEEEEEcCCC-C--ceEEEEHHHHHHHHHHHHHHHH-HcCCCCCCEEEEECCCCHHHHH--HHHHHHHhCcEEEeeC
Confidence 4667766532211 1 2356899999887777766554 4578999999999988765444 4789999999988775
Q ss_pred -CCCHHHHHHHHHhcCceeeecch
Q 014952 261 -KFDIVKLMELVQKYKVTVAPFVP 283 (415)
Q Consensus 261 -~~~~~~~~~~l~~~~~t~l~~~p 283 (415)
.+.++.+...++..++.++++..
T Consensus 149 ~~~~~~~l~~~l~~~~~~~li~~~ 172 (647)
T PTZ00237 149 DGYSVKSLIDRIETITPKLIITTN 172 (647)
T ss_pred CCCCHHHHHHHHHhcCCCEEEEcc
Confidence 58899999999999999998754
No 143
>PLN02654 acetate-CoA ligase
Probab=78.01 E-value=16 Score=37.59 Aligned_cols=99 Identities=20% Similarity=0.245 Sum_probs=72.5
Q ss_pred CCCCeEEEecCCCCCCCCceeeechHHHHHHHhhhhcCCCCCccCCCCcEEEEccchHHHHhhHHHHHHHHHcCcEEEEc
Q 014952 180 NPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIM 259 (415)
Q Consensus 180 ~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~l~~l~~G~~~v~~ 259 (415)
.++.+|++..... .+ ....+|...+...+..+...+. ..+++++|++..++|..--+-. .+++++..|+..+.+
T Consensus 102 ~~~~~Al~~~~~~-~~--~~~~~Ty~eL~~~v~~lA~~L~-~~Gv~~GdrV~i~~pn~~e~v~--a~lA~~~~Gav~vpv 175 (666)
T PLN02654 102 NGDKIAIYWEGNE-PG--FDASLTYSELLDRVCQLANYLK-DVGVKKGDAVVIYLPMLMELPI--AMLACARIGAVHSVV 175 (666)
T ss_pred CCCCEEEEEEcCC-CC--ceEEEeHHHHHHHHHHHHHHHH-HcCCCCCCEEEEEcCCCHHHHH--HHHHHHHcCCEEEec
Confidence 3566776542211 11 2356899999877776666544 4578899999999987654333 578999999998887
Q ss_pred C-CCCHHHHHHHHHhcCceeeecchH
Q 014952 260 Q-KFDIVKLMELVQKYKVTVAPFVPP 284 (415)
Q Consensus 260 ~-~~~~~~~~~~l~~~~~t~l~~~p~ 284 (415)
+ .+.++.+...++..++.++++...
T Consensus 176 ~~~~~~~~l~~~l~~~~~~~li~~~~ 201 (666)
T PLN02654 176 FAGFSAESLAQRIVDCKPKVVITCNA 201 (666)
T ss_pred CCCCCHHHHHHHHHhcCceEEEEcCc
Confidence 5 588999999999999999987654
No 144
>PRK06187 long-chain-fatty-acid--CoA ligase; Validated
Probab=77.69 E-value=32 Score=33.68 Aligned_cols=99 Identities=14% Similarity=0.112 Sum_probs=70.7
Q ss_pred CCCcEEEeCCCC-------CeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCch-hHHHHHHHHHHhCCeEeecCCC
Q 014952 39 ADRPCIINGPTG-------DVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCP-QFVFAFLGASYIGATSTTANPF 110 (415)
Q Consensus 39 p~~~a~~~~~~~-------~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~-~~~~~~lA~~~~G~~~v~l~~~ 110 (415)
++.++++...++ ..+|++.+...+..... ..+++++|++....+... ..+...++++..|+..+..+..
T Consensus 166 ~~~~~~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~---~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~G~~~v~~~~~ 242 (521)
T PRK06187 166 ENDAAAMLYTSGTTGHPKGVVLSHRNLFLHSLAVCA---WLKLSRDDVYLVIVPMFHVHAWGLPYLALMAGAKQVIPRRF 242 (521)
T ss_pred ccceEEEEECCCCCCCCceEEeehHHHHHHHHHHHH---hhCCCCCCEEEEeCCchHHhhHHHHHHHHHhCCEEEecCCC
Confidence 355666644333 35799988876666555 447889999888877443 2234455588889998877764
Q ss_pred CCHHHHHHHHHhcCceEEEEcccchHHHHhh
Q 014952 111 YTPPEIAKQAIASKAKIIITQAVYNDKVRDL 141 (415)
Q Consensus 111 ~~~~~~~~~l~~~~~~~vl~~~~~~~~~~~~ 141 (415)
+.+.+...+++.++..++........+...
T Consensus 243 -~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~ 272 (521)
T PRK06187 243 -DPENLLDLIETERVTFFFAVPTIWQMLLKA 272 (521)
T ss_pred -CHHHHHHHHHHhCCeEEEchHHHHHHHHcC
Confidence 888899999999999999988776655443
No 145
>PRK09274 peptide synthase; Provisional
Probab=77.41 E-value=13 Score=36.88 Aligned_cols=100 Identities=12% Similarity=0.091 Sum_probs=69.5
Q ss_pred CCCeEEEecCCCC-CCCCceeeechHHHHHHHhhhhcCCCCCccCCCCcEEEEccchHHHHhhHHHHHHHHHcCcEEEEc
Q 014952 181 PDDVVALPYSSGT-TGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIM 259 (415)
Q Consensus 181 ~~~~a~i~~TSGt-TG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~l~~l~~G~~~v~~ 259 (415)
++.++++....++ ....+...+|...+...+......+. ..++.+++++..+++-+..+-. .+++++..|+..+.+
T Consensus 20 p~~~a~~~~~~~~~~~~~~~~~~Ty~~l~~~~~~~A~~L~-~~g~~~gd~V~~~~~n~~~~~~--~~la~~~~G~~~v~l 96 (552)
T PRK09274 20 PDQLAVAVPGGRGADGKLAYDELSFAELDARSDAIAHGLN-AAGIGRGMRAVLMVTPSLEFFA--LTFALFKAGAVPVLV 96 (552)
T ss_pred CCcceEEeccCCCCccccccCcccHHHHHHHHHHHHHHHH-HcCCCCCCEEEEEeCCcHHHHH--HHHHHHHcCeEEEEc
Confidence 4556655432221 12223336899998877776666543 4567899999998876554333 578999999999888
Q ss_pred CC-CCHHHHHHHHHhcCceeeecch
Q 014952 260 QK-FDIVKLMELVQKYKVTVAPFVP 283 (415)
Q Consensus 260 ~~-~~~~~~~~~l~~~~~t~l~~~p 283 (415)
++ ...+.+...+++.++..++..+
T Consensus 97 ~~~~~~~~l~~~l~~~~~~~~i~~~ 121 (552)
T PRK09274 97 DPGMGIKNLKQCLAEAQPDAFIGIP 121 (552)
T ss_pred CCCccHHHHHHHHHhcCCCEEEecc
Confidence 64 6778888899999999887754
No 146
>TIGR02188 Ac_CoA_lig_AcsA acetate--CoA ligase. This model describes acetate-CoA ligase (EC 6.2.1.1), also called acetyl-CoA synthetase and acetyl-activating enzyme. It catalyzes the reaction ATP + acetate + CoA = AMP + diphosphate + acetyl-CoA and belongs to the family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=76.88 E-value=16 Score=37.11 Aligned_cols=99 Identities=17% Similarity=0.220 Sum_probs=73.0
Q ss_pred CCCCeEEEecCCCCCCCCceeeechHHHHHHHhhhhcCCCCCccCCCCcEEEEccchHHHHhhHHHHHHHHHcCcEEEEc
Q 014952 180 NPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIM 259 (415)
Q Consensus 180 ~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~l~~l~~G~~~v~~ 259 (415)
.++.+|++.... .+| ....+|...+...+..+...+. ..++.++|++..++|..--+-. .+++++..|+..+.+
T Consensus 70 ~p~~~Al~~~~~-~~~--~~~~~Ty~eL~~~v~~lA~~L~-~~Gv~~gd~V~i~~~n~~e~~~--~~lA~~~~Gav~v~i 143 (625)
T TIGR02188 70 RPDKVAIIWEGD-EPG--EVRKITYRELHREVCRFANVLK-SLGVKKGDRVAIYMPMIPEAAI--AMLACARIGAIHSVV 143 (625)
T ss_pred CCCCeEEEEEcC-CCC--ceEEEEHHHHHHHHHHHHHHHH-HcCCCCCCEEEEECCCCHHHHH--HHHHHHHhCCEEecc
Confidence 567788765322 122 2456899998877766666544 4578899999999987654333 578999999998887
Q ss_pred C-CCCHHHHHHHHHhcCceeeecchH
Q 014952 260 Q-KFDIVKLMELVQKYKVTVAPFVPP 284 (415)
Q Consensus 260 ~-~~~~~~~~~~l~~~~~t~l~~~p~ 284 (415)
+ .+.++.+...++..++.+++....
T Consensus 144 ~~~~~~~~l~~~l~~~~~~~li~~~~ 169 (625)
T TIGR02188 144 FGGFSAEALADRINDAGAKLVITADE 169 (625)
T ss_pred CCCCCHHHHHHHHHhcCCCEEEEcCc
Confidence 5 478899999999999999987653
No 147
>TIGR03089 conserved hypothetical protein TIGR03089. This protein family is found, so far, only in the Actinobacteria (Streptomyces, Mycobacterium, Corynebacterium, Nocardia, Propionibacterium, etc.) and never more than one to a genome. Members show twilight-level sequence similarity to family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=76.71 E-value=20 Score=30.97 Aligned_cols=54 Identities=17% Similarity=0.294 Sum_probs=42.8
Q ss_pred HHcCCCCCCEEEEEcCCch--hHHHHHHHHHHhCCeEeecCCCCCHHHHHHHHHhcCc
Q 014952 70 SKLGVQKGDVIMLLLQNCP--QFVFAFLGASYIGATSTTANPFYTPPEIAKQAIASKA 125 (415)
Q Consensus 70 ~~~g~~~g~~V~i~~~~~~--~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~ 125 (415)
...|+.++|++. ..|-.- .....+++++..|++.+.+ +.++.+.+.+.+++.++
T Consensus 171 ~~~~l~~~D~~l-~~Pl~H~~gl~~~~~~~l~~G~t~v~~-~rFd~~~~l~~i~~~~v 226 (227)
T TIGR03089 171 RAAGLPPGDRVL-VLAWTDLEDFLATLLAPLAAGGSLVLV-THPDPARLDQIAETERV 226 (227)
T ss_pred hhcCCCCCCeEE-ecCCCchHHHHHHHHHHhccCceEEEe-cCCCHHHHHHHHHhhcC
Confidence 556889999999 888432 3445689999999998888 57888988888887765
No 148
>PLN02736 long-chain acyl-CoA synthetase
Probab=76.59 E-value=22 Score=36.40 Aligned_cols=89 Identities=10% Similarity=-0.066 Sum_probs=68.5
Q ss_pred eeechHHHHHHHhhhhcCCCCCccCCCCcEEEEccchHHHHhhHHHHHHHHHcCcEEEEcC-CCCHHHHHHHHHhcCcee
Q 014952 200 VMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIMQ-KFDIVKLMELVQKYKVTV 278 (415)
Q Consensus 200 v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~l~~l~~G~~~v~~~-~~~~~~~~~~l~~~~~t~ 278 (415)
..+|...+...+..+...+. ..+++++|++...++-..-+-. .+++++..|+.++.++ ..+++.+...+++.++.+
T Consensus 77 ~~lTy~el~~~v~~lA~~L~-~~Gv~~gd~Vai~~~n~~e~~~--~~lA~~~~G~v~vpl~~~~~~~~l~~il~~~~~~~ 153 (651)
T PLN02736 77 KWMTYGEAGTARTAIGSGLV-QHGIPKGACVGLYFINRPEWLI--VDHACSAYSYVSVPLYDTLGPDAVKFIVNHAEVAA 153 (651)
T ss_pred EEEEHHHHHHHHHHHHHHHH-HhCCCCCCEEEEEcCCCHHHHH--HHHHHHHcCCeEEEeecCCCHHHHHHHHhccCCCE
Confidence 44788888877766665443 4578899999888876654333 4788999999998775 478899999999999999
Q ss_pred eecchHHHHHHHc
Q 014952 279 APFVPPIVLAVAK 291 (415)
Q Consensus 279 l~~~p~~l~~l~~ 291 (415)
+++.+..+..+..
T Consensus 154 l~~~~~~~~~~~~ 166 (651)
T PLN02736 154 IFCVPQTLNTLLS 166 (651)
T ss_pred EEECHHHHHHHHH
Confidence 9998877665543
No 149
>PRK06839 acyl-CoA synthetase; Validated
Probab=75.35 E-value=25 Score=34.32 Aligned_cols=99 Identities=15% Similarity=0.087 Sum_probs=73.0
Q ss_pred CCCCeEEEecCCCCCCCCceeeechHHHHHHHhhhhcCCCCCccCCCCcEEEEccchHHHHhhHHHHHHHHHcCcEEEEc
Q 014952 180 NPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIM 259 (415)
Q Consensus 180 ~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~l~~l~~G~~~v~~ 259 (415)
.++.++++. ....+|+..+......+...+...++..+++++....+-+..+-. .+++++..|+..+..
T Consensus 15 ~p~~~a~~~---------~~~~~ty~~l~~~~~~la~~L~~~~g~~~~~~V~i~~~~~~~~~~--~~la~~~~G~~~~~~ 83 (496)
T PRK06839 15 HPDRIAIIT---------EEEEMTYKQLHEYVSKVAAYLIYELNVKKGERIAILSQNSLEYIV--LLFAIAKVECIAVPL 83 (496)
T ss_pred CCCCeEEEE---------CCceEEHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHH--HHHHHHhcCcEEEec
Confidence 356666663 145789999988777777654323467889998888877654333 578999999999988
Q ss_pred CC-CCHHHHHHHHHhcCceeeecchHHHHHH
Q 014952 260 QK-FDIVKLMELVQKYKVTVAPFVPPIVLAV 289 (415)
Q Consensus 260 ~~-~~~~~~~~~l~~~~~t~l~~~p~~l~~l 289 (415)
+. .++..+...+++.+++.++..+.....+
T Consensus 84 ~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~ 114 (496)
T PRK06839 84 NIRLTENELIFQLKDSGTTVLFVEKTFQNMA 114 (496)
T ss_pred CcccCHHHHHHHHHhcCceEEEEcHHHHHHH
Confidence 64 6788889999999999998887665443
No 150
>PRK00174 acetyl-CoA synthetase; Provisional
Probab=75.13 E-value=19 Score=36.59 Aligned_cols=98 Identities=15% Similarity=0.171 Sum_probs=72.4
Q ss_pred CCCCeEEEecCCCCCCCCceeeechHHHHHHHhhhhcCCCCCccCCCCcEEEEccchHHHHhhHHHHHHHHHcCcEEEEc
Q 014952 180 NPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIM 259 (415)
Q Consensus 180 ~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~l~~l~~G~~~v~~ 259 (415)
.++.+|++.... . ......+|.+.+...+..+...+. ..+..++|++...+|-.--+-. .+++++..|+..+..
T Consensus 80 ~p~~~Al~~~~~--~-~~~~~~lTy~eL~~~v~~lA~~L~-~~Gv~~gd~V~i~~~n~~e~~~--~~lA~~~~Gav~v~l 153 (637)
T PRK00174 80 RGDKVAIIWEGD--D-PGDSRKITYRELHREVCRFANALK-SLGVKKGDRVAIYMPMIPEAAV--AMLACARIGAVHSVV 153 (637)
T ss_pred CCCCeEEEEECC--C-CCceEEEEHHHHHHHHHHHHHHHH-HcCCCCCCEEEEEcCCCHHHHH--HHHHHHHcCCEEEec
Confidence 467788765321 1 113567899999887777666543 4567899999999877654333 478999999999887
Q ss_pred C-CCCHHHHHHHHHhcCceeeecch
Q 014952 260 Q-KFDIVKLMELVQKYKVTVAPFVP 283 (415)
Q Consensus 260 ~-~~~~~~~~~~l~~~~~t~l~~~p 283 (415)
+ .+.++.+...++..++.+++...
T Consensus 154 ~~~~~~~~l~~~l~~~~~~~li~~~ 178 (637)
T PRK00174 154 FGGFSAEALADRIIDAGAKLVITAD 178 (637)
T ss_pred CCCCCHHHHHHHHHhcCCcEEEEcC
Confidence 6 47888999999999999988754
No 151
>PRK04319 acetyl-CoA synthetase; Provisional
Probab=74.43 E-value=24 Score=35.28 Aligned_cols=87 Identities=18% Similarity=0.143 Sum_probs=67.1
Q ss_pred eeechHHHHHHHhhhhcCCCCCccCCCCcEEEEccchHHHHhhHHHHHHHHHcCcEEEEcC-CCCHHHHHHHHHhcCcee
Q 014952 200 VMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIMQ-KFDIVKLMELVQKYKVTV 278 (415)
Q Consensus 200 v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~l~~l~~G~~~v~~~-~~~~~~~~~~l~~~~~t~ 278 (415)
..+|.+.+...+......+. ..++.+++++...++-+..+-. .+++++..|+.++..+ ...+..+...++..+++.
T Consensus 72 ~~~Ty~el~~~v~~~A~~L~-~~gv~~gd~V~i~~~n~~~~~~--~~la~~~~G~v~vpl~~~~~~~~l~~~l~~~~~~~ 148 (570)
T PRK04319 72 EKYTYKELKELSNKFANVLK-ELGVEKGDRVFIFMPRIPELYF--ALLGALKNGAIVGPLFEAFMEEAVRDRLEDSEAKV 148 (570)
T ss_pred eeecHHHHHHHHHHHHHHHH-HhCCCCCCEEEEECCCCHHHHH--HHHHHHHcCcEEcccccccCHHHHHHHHHccCCcE
Confidence 46788888877766665443 4567889999988886654333 5789999999998775 478889999999999999
Q ss_pred eecchHHHHHH
Q 014952 279 APFVPPIVLAV 289 (415)
Q Consensus 279 l~~~p~~l~~l 289 (415)
++..+..+...
T Consensus 149 ii~~~~~~~~~ 159 (570)
T PRK04319 149 LITTPALLERK 159 (570)
T ss_pred EEEChhhhhcc
Confidence 99888766543
No 152
>PLN03102 acyl-activating enzyme; Provisional
Probab=72.53 E-value=23 Score=35.64 Aligned_cols=95 Identities=12% Similarity=0.120 Sum_probs=69.8
Q ss_pred CCCCeEEEecCCCCCCCCceeeechHHHHHHHhhhhcCCCCCccCCCCcEEEEccchHHHHhhHHHHHHHHHcCcEEEEc
Q 014952 180 NPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIM 259 (415)
Q Consensus 180 ~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~l~~l~~G~~~v~~ 259 (415)
.++.+|++.- + -.+|...+...+..+...+. ..++.+++++...+|-.- .+...+++++..|+.++.+
T Consensus 27 ~p~~~Al~~~--~-------~~~Ty~eL~~~~~~~a~~L~-~~Gl~~gd~Vai~~~n~~--e~~~~~la~~~~G~~~vpl 94 (579)
T PLN03102 27 YPNRTSIIYG--K-------TRFTWPQTYDRCCRLAASLI-SLNITKNDVVSVLAPNTP--AMYEMHFAVPMAGAVLNPI 94 (579)
T ss_pred CCCCeEEEEC--C-------cEEEHHHHHHHHHHHHHHHH-HcCCCCCCEEEEEcCCcH--HHHHHHHHHHhcCcEEeec
Confidence 4566666541 1 25788888877766666443 346788999999888654 3333578999999998888
Q ss_pred CC-CCHHHHHHHHHhcCceeeecchHHH
Q 014952 260 QK-FDIVKLMELVQKYKVTVAPFVPPIV 286 (415)
Q Consensus 260 ~~-~~~~~~~~~l~~~~~t~l~~~p~~l 286 (415)
++ .+.+.+...+++.+++.++..+...
T Consensus 95 ~~~~~~~~l~~~l~~~~~~~ii~~~~~~ 122 (579)
T PLN03102 95 NTRLDATSIAAILRHAKPKILFVDRSFE 122 (579)
T ss_pred cccCCHHHHHHHHhccCCeEEEEChhhH
Confidence 64 6889999999999999998766543
No 153
>PRK08316 acyl-CoA synthetase; Validated
Probab=72.47 E-value=23 Score=34.79 Aligned_cols=87 Identities=16% Similarity=0.093 Sum_probs=65.3
Q ss_pred eeechHHHHHHHhhhhcCCCCCccCCCCcEEEEccchHHHHhhHHHHHHHHHcCcEEEEcCC-CCHHHHHHHHHhcCcee
Q 014952 200 VMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIMQK-FDIVKLMELVQKYKVTV 278 (415)
Q Consensus 200 v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~l~~l~~G~~~v~~~~-~~~~~~~~~l~~~~~t~ 278 (415)
..+|...+...+......+. ..++.+++++..+.|-...+- ..+++++..|+..+.++. ...+.+...+++.++..
T Consensus 35 ~~~Ty~~l~~~~~~~a~~L~-~~gi~~~~~V~l~~~~~~~~~--~~~~a~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~ 111 (523)
T PRK08316 35 RSWTYAELDAAVNRVAAALL-DLGLKKGDRVAALGHNSDAYA--LLWLACARAGAVHVPVNFMLTGEELAYILDHSGARA 111 (523)
T ss_pred ceeeHHHHHHHHHHHHHHHH-HcCCCCCCEEEEECCCCHHHH--HHHHHHHhcCcEEEecccccCHHHHHHHHHhCCCCE
Confidence 56788888776666655443 336788899988887766433 357899999999988864 67888999999999999
Q ss_pred eecchHHHHHH
Q 014952 279 APFVPPIVLAV 289 (415)
Q Consensus 279 l~~~p~~l~~l 289 (415)
++........+
T Consensus 112 ii~~~~~~~~~ 122 (523)
T PRK08316 112 FLVDPALAPTA 122 (523)
T ss_pred EEEccchHHHH
Confidence 98877665544
No 154
>PRK08008 caiC putative crotonobetaine/carnitine-CoA ligase; Validated
Probab=72.12 E-value=29 Score=34.08 Aligned_cols=101 Identities=11% Similarity=0.017 Sum_probs=71.2
Q ss_pred CCCCeEEEecCCCCCCCCceeeechHHHHHHHhhhhcCCCCCccCCCCcEEEEccchHHHHhhHHHHHHHHHcCcEEEEc
Q 014952 180 NPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIM 259 (415)
Q Consensus 180 ~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~l~~l~~G~~~v~~ 259 (415)
.++.+|++.-.. .+ ..-.+|...+...+..+...+. ..++.+++++..+.+-+.-.-. .+++++..|+.++..
T Consensus 20 ~p~~~a~~~~~~--~~--~~~~~ty~~l~~~v~~la~~L~-~~g~~~~~~v~i~~~n~~~~~~--~~la~~~~G~~~v~l 92 (517)
T PRK08008 20 YGHKTALIFESS--GG--VVRRYSYLELNEEINRTANLFY-SLGIRKGDKVALHLDNCPEFIF--CWFGLAKIGAIMVPI 92 (517)
T ss_pred CCCceEEEcccC--CC--ccceeeHHHHHHHHHHHHHHHH-HcCCCCCCEEEEEcCCCHHHHH--HHHHHHHcCeEEEEc
Confidence 456677654321 11 1234688888776666555433 3467889999998877664443 578999999998887
Q ss_pred CC-CCHHHHHHHHHhcCceeeecchHHHH
Q 014952 260 QK-FDIVKLMELVQKYKVTVAPFVPPIVL 287 (415)
Q Consensus 260 ~~-~~~~~~~~~l~~~~~t~l~~~p~~l~ 287 (415)
++ ..++.+...+++.++..++..+....
T Consensus 93 ~~~~~~~~l~~~l~~~~~~~l~~~~~~~~ 121 (517)
T PRK08008 93 NARLLREESAWILQNSQASLLVTSAQFYP 121 (517)
T ss_pred CcccCHHHHHHHHHhcCceEEEEecchhH
Confidence 64 68889999999999999988776543
No 155
>TIGR01923 menE O-succinylbenzoate-CoA ligase. This model represents an enzyme, O-succinylbenzoate-CoA ligase, which is involved in the fourth step of the menaquinone biosynthesis pathway. O-succinylbenzoate-CoA ligase, together with menB - naphtoate synthase, take 2-succinylbenzoate and convert it into 1,4-di-hydroxy-2- naphtoate.
Probab=71.97 E-value=30 Score=33.02 Aligned_cols=96 Identities=15% Similarity=0.095 Sum_probs=67.9
Q ss_pred CCCcEEEeCCCC-------CeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCc-hhHHHHHHHHHHhCCeEeecCCC
Q 014952 39 ADRPCIINGPTG-------DVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNC-PQFVFAFLGASYIGATSTTANPF 110 (415)
Q Consensus 39 p~~~a~~~~~~~-------~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~-~~~~~~~lA~~~~G~~~v~l~~~ 110 (415)
+++++++...++ ..+|++.+...+..++..+ +++++|++....+-. ...+..+++.+..|+..+..++.
T Consensus 110 ~~~~~~i~~TSGtTG~PK~v~~s~~~~~~~~~~~~~~~---~~~~~d~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~ 186 (436)
T TIGR01923 110 MDQIATLMFTSGTTGKPKAVPHTFRNHYASAVGSKENL---GFTEDDNWLLSLPLYHISGLSILFRWLIEGATLRIVDKF 186 (436)
T ss_pred cCceEEEEeCCCCCCCCcEEEEehHHHHHHHHHHHhhc---CCCCCceEEEccCcHhHHHHHHHHHHHhcCceEEecchH
Confidence 355666543332 3689999988777666544 788999988877743 22334567888899998877643
Q ss_pred CCHHHHHHHHHhcCceEEEEcccchHHHHh
Q 014952 111 YTPPEIAKQAIASKAKIIITQAVYNDKVRD 140 (415)
Q Consensus 111 ~~~~~~~~~l~~~~~~~vl~~~~~~~~~~~ 140 (415)
+.+...+.+.++.++.........+..
T Consensus 187 ---~~~~~~l~~~~~t~~~~~P~~l~~l~~ 213 (436)
T TIGR01923 187 ---NQLLEMIANERVTHISLVPTQLNRLLD 213 (436)
T ss_pred ---HHHHHHHHHhCCeEEEeHHHHHHHHHh
Confidence 488889999999999988776655544
No 156
>TIGR01217 ac_ac_CoA_syn acetoacetyl-CoA synthase. This enzyme catalyzes the first step of the mevalonate pathway of IPP biosynthesis. Most bacteria do not use this pathway, but rather the deoxyxylulose pathway.
Probab=71.89 E-value=25 Score=35.92 Aligned_cols=95 Identities=18% Similarity=0.103 Sum_probs=70.9
Q ss_pred CCeEEEecCCCCCCCCceeeechHHHHHHHhhhhcCCCCCccCCCCcEEEEccchHHHHhhHHHHHHHHHcCcEEEEcC-
Q 014952 182 DDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIMQ- 260 (415)
Q Consensus 182 ~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~l~~l~~G~~~v~~~- 260 (415)
++++++.... +|. ...+|...+...+..+...+. ..+++++|++..++|..--.-. .+++++..|+..+.+.
T Consensus 99 ~~~a~~~~~~--~~~--~~~~Ty~eL~~~v~~lA~~L~-~~Gv~~GdrV~i~~~n~~e~~~--~~lA~~~~Gav~vp~~~ 171 (652)
T TIGR01217 99 TEPALLYVDE--THE--PAPVTWAELRRQVASLAAALR-ALGVRPGDRVSGYLPNIPQAVV--AMLATASVGAIWSSCSP 171 (652)
T ss_pred CCeEEEEECC--CCC--eeEEeHHHHHHHHHHHHHHHH-HcCCCCCCEEEEEcCCCHHHHH--HHHHHHHhCeEEEecCC
Confidence 4566655422 222 346899999887777766554 4578999999999988754443 4789999999988876
Q ss_pred CCCHHHHHHHHHhcCceeeecch
Q 014952 261 KFDIVKLMELVQKYKVTVAPFVP 283 (415)
Q Consensus 261 ~~~~~~~~~~l~~~~~t~l~~~p 283 (415)
.+.++.+...+++.++.++++..
T Consensus 172 ~~~~~~l~~~l~~~~~k~li~~~ 194 (652)
T TIGR01217 172 DFGARGVLDRFQQIEPKLLFTVD 194 (652)
T ss_pred CCCHHHHHHHHHhcCCcEEEEcc
Confidence 47889999999999999988754
No 157
>TIGR02316 propion_prpE propionate--CoA ligase. This family contains one of three readily separable clades of proteins in the group of acetate and propionate--CoA ligases. Characterized members of this family act on propionate. From propionyl-CoA, there is a cyclic degradation pathway: it is ligated by PrpC to the TCA cycle intermediate oxaloacetate, acted upon further by PrpD and an aconitase, then cleaved by PrpB to pyruvate and the TCA cycle intermediate succinate.
Probab=71.76 E-value=29 Score=35.28 Aligned_cols=98 Identities=17% Similarity=0.180 Sum_probs=71.7
Q ss_pred CCCCeEEEecCCCCCCCCceeeechHHHHHHHhhhhcCCCCCccCCCCcEEEEccchHHHHhhHHHHHHHHHcCcEEEEc
Q 014952 180 NPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIM 259 (415)
Q Consensus 180 ~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~l~~l~~G~~~v~~ 259 (415)
.++.+|++... ..+|. ...+|...+...+..+...+. ..++.++|++..++|..--.-. .+++++..|+..+.+
T Consensus 65 ~p~~~Al~~~~-~~~~~--~~~~Ty~eL~~~v~~lA~~L~-~~Gv~~Gd~V~i~~~n~~e~v~--~~lA~~~~Gav~vpl 138 (628)
T TIGR02316 65 RGEQLALVTVS-SETGQ--ERTLTYRQLHREVNVFASALR-ALGVGRGDRVLIYMPMIAEAVF--AMLACARIGAIHSVV 138 (628)
T ss_pred CCCCeEEEEEc-CCCCc--eEEEeHHHHHHHHHHHHHHHH-HcCCCCCCEEEEEcCCCHHHHH--HHHHHHHhCCEEEec
Confidence 45677766532 22222 345799988877776666554 4578999999999987653333 588999999998877
Q ss_pred C-CCCHHHHHHHHHhcCceeeecch
Q 014952 260 Q-KFDIVKLMELVQKYKVTVAPFVP 283 (415)
Q Consensus 260 ~-~~~~~~~~~~l~~~~~t~l~~~p 283 (415)
. .+.+..+...++..++.+++...
T Consensus 139 ~~~~~~~~l~~~l~~~~~~~li~~~ 163 (628)
T TIGR02316 139 FGGFASHSLALRIDDATPKLIVSAD 163 (628)
T ss_pred CCCCCHHHHHHHHHhcCceEEEECC
Confidence 5 47888999999999999988754
No 158
>PRK07529 AMP-binding domain protein; Validated
Probab=71.74 E-value=20 Score=36.50 Aligned_cols=98 Identities=16% Similarity=0.136 Sum_probs=68.5
Q ss_pred CCCCeEEEecCCCCCCCCceeeechHHHHHHHhhhhcCCCCCccCCCCcEEEEccchHHHHhhHHHHHHHHHcCcEEEEc
Q 014952 180 NPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIM 259 (415)
Q Consensus 180 ~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~l~~l~~G~~~v~~ 259 (415)
.++.+|++....+.. ..+...+|...+...+..+...+. ..++.+++++...+|-..-+-. .+++++..|. ++.+
T Consensus 38 ~p~~~Al~~~~~~~~-~~~~~~~Ty~eL~~~v~~~A~~L~-~~Gi~~gd~V~i~~~n~~e~~~--~~lA~~~~Gi-~~pi 112 (632)
T PRK07529 38 HPDAPALSFLLDADP-LDRPETWTYAELLADVTRTANLLH-SLGVGPGDVVAFLLPNLPETHF--ALWGGEAAGI-ANPI 112 (632)
T ss_pred CCCCceEEeecccCC-CCCCceeEHHHHHHHHHHHHHHHH-HcCCCCCCEEEEECCCCHHHHH--HHHHHHHhCE-EEeC
Confidence 456777765533211 123567899988877766666544 4578899999999987654333 4788888884 4444
Q ss_pred -CCCCHHHHHHHHHhcCceeeecc
Q 014952 260 -QKFDIVKLMELVQKYKVTVAPFV 282 (415)
Q Consensus 260 -~~~~~~~~~~~l~~~~~t~l~~~ 282 (415)
+..+++.+...+++.++.+++..
T Consensus 113 ~~~~~~~~i~~~l~~~~~~~li~~ 136 (632)
T PRK07529 113 NPLLEPEQIAELLRAAGAKVLVTL 136 (632)
T ss_pred CCcCCHHHHHHHHHhcCCcEEEEe
Confidence 45788999999999999998875
No 159
>PRK03584 acetoacetyl-CoA synthetase; Provisional
Probab=71.65 E-value=27 Score=35.68 Aligned_cols=97 Identities=16% Similarity=0.132 Sum_probs=70.6
Q ss_pred CCCCeEEEecCCCCCCCCceeeechHHHHHHHhhhhcCCCCCccCCCCcEEEEccchHHHHhhHHHHHHHHHcCcEEEEc
Q 014952 180 NPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIM 259 (415)
Q Consensus 180 ~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~l~~l~~G~~~v~~ 259 (415)
.++.+|++.... .| ....+|...+...+..+...+. ..++.++|++..++|-.--.-. .+++++..|+..+.+
T Consensus 97 ~~~~~Al~~~~~--~~--~~~~~Ty~eL~~~v~~lA~~L~-~~Gv~~gd~V~i~~~n~~e~v~--~~lA~~~~Gav~v~l 169 (655)
T PRK03584 97 RDDRPAIIFRGE--DG--PRRELSWAELRRQVAALAAALR-ALGVGPGDRVAAYLPNIPETVV--AMLATASLGAIWSSC 169 (655)
T ss_pred CCCCeEEEEECC--CC--ceEEEeHHHHHHHHHHHHHHHH-HcCCCCCCEEEEEcCCCHHHHH--HHHHHHHcCcEEEee
Confidence 356777665322 22 2356899988877766665443 4568899999999986554333 588999999998887
Q ss_pred C-CCCHHHHHHHHHhcCceeeecch
Q 014952 260 Q-KFDIVKLMELVQKYKVTVAPFVP 283 (415)
Q Consensus 260 ~-~~~~~~~~~~l~~~~~t~l~~~p 283 (415)
+ .+.+..+...++..++.++++..
T Consensus 170 ~~~~~~~~l~~~l~~~~~~~li~~~ 194 (655)
T PRK03584 170 SPDFGVQGVLDRFGQIEPKVLIAVD 194 (655)
T ss_pred CCCCCHHHHHHHHHHcCCcEEEEcc
Confidence 5 47888999999999999888754
No 160
>TIGR03098 ligase_PEP_1 acyl-CoA ligase (AMP-forming), exosortase system type 1 associated. This group of proteins contains an AMP-binding domain (pfam00501) associated with acyl CoA-ligases. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present next to a decarboxylase enzyme. A number of sequences from Burkholderia species also hit this model, but the genomic context is obviously different. The hypothesis of a constant substrate for this family is only strong where the exosortase context is present.
Probab=71.49 E-value=26 Score=34.34 Aligned_cols=84 Identities=13% Similarity=0.085 Sum_probs=63.8
Q ss_pred eechHHHHHHHhhhhcCCCCCccCCCCcEEEEccchHHHHhhHHHHHHHHHcCcEEEEcCC-CCHHHHHHHHHhcCceee
Q 014952 201 MLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIMQK-FDIVKLMELVQKYKVTVA 279 (415)
Q Consensus 201 ~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~l~~l~~G~~~v~~~~-~~~~~~~~~l~~~~~t~l 279 (415)
.+|.+.+...+......+. ..+..+++++..+++-+..+-. .+++++..|+..+..+. ...+.+...+++.++..+
T Consensus 25 ~~ty~~l~~~v~~~a~~l~-~~g~~~~~~V~i~~~n~~~~~~--~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~~ 101 (515)
T TIGR03098 25 TLTYAALSERVLALASGLR-GLGLARGERVAIYLDKRLETVT--AMFGAALAGGVFVPINPLLKAEQVAHILADCNVRLL 101 (515)
T ss_pred eeeHHHHHHHHHHHHHHHH-HcCCCCCCEEEEEcCCCHHHHH--HHHHHHhcCEEEEeCCCCCCHHHHHHHHHcCCCeEE
Confidence 6788888776666655443 3467788999888877654443 47899999999988764 688899999999999999
Q ss_pred ecchHHHH
Q 014952 280 PFVPPIVL 287 (415)
Q Consensus 280 ~~~p~~l~ 287 (415)
+..+....
T Consensus 102 i~~~~~~~ 109 (515)
T TIGR03098 102 VTSSERLD 109 (515)
T ss_pred EEccchhh
Confidence 88765544
No 161
>PF01041 DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransferase family; InterPro: IPR000653 This entry represents a family that are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions. The family includes StsA P72454 from SWISSPROT, StsC P77952 from SWISSPROT and StsS []. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase 2.6.1.50 from EC, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin [].; PDB: 2FNI_A 2FNU_A 2FN6_A 2PO3_A 3UWC_A 1O61_B 1O62_B 1O69_B 1B9I_A 1B9H_A ....
Probab=71.20 E-value=30 Score=32.34 Aligned_cols=80 Identities=20% Similarity=0.301 Sum_probs=46.7
Q ss_pred HHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHHhCCeEeecCCC-----CCHHHHHHHHHhcCceEEEE-cc----cc
Q 014952 65 VAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGATSTTANPF-----YTPPEIAKQAIASKAKIIIT-QA----VY 134 (415)
Q Consensus 65 ~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~-----~~~~~~~~~l~~~~~~~vl~-~~----~~ 134 (415)
+-..|..+|+++||.|++- ...+..+.-|+..+|+.++.+|-+ .+.+.+.+.+..-. +.|+. +- ..
T Consensus 53 l~~al~~l~~~~gdeVi~p---~~t~~~~~~ai~~~G~~pv~~Di~~~~~~id~~~~~~~i~~~t-~ai~~~h~~G~~~d 128 (363)
T PF01041_consen 53 LHLALRALGLGPGDEVIVP---AYTFPATASAILWAGAEPVFVDIDPETLNIDPEALEKAITPKT-KAILVVHLFGNPAD 128 (363)
T ss_dssp HHHHHHHTTGGTTSEEEEE---SSS-THHHHHHHHTT-EEEEE-BETTTSSB-HHHHHHHHHTTE-EEEEEE-GGGB---
T ss_pred HHHHHHhcCCCcCceEecC---CCcchHHHHHHHHhccEEEEEeccCCcCCcCHHHHHHHhccCc-cEEEEecCCCCccc
Confidence 3445666899999988775 456677788999999999988743 45577777765433 44443 21 23
Q ss_pred hHHHHhhhhhcCce
Q 014952 135 NDKVRDLSEHHGAR 148 (415)
Q Consensus 135 ~~~~~~~~~~~~~~ 148 (415)
.+.+.++....++.
T Consensus 129 ~~~i~~~~~~~~i~ 142 (363)
T PF01041_consen 129 MDAIRAIARKHGIP 142 (363)
T ss_dssp HHHHHHHHHHTT-E
T ss_pred HHHHHHHHHHcCCc
Confidence 34444444444443
No 162
>PRK06334 long chain fatty acid--[acyl-carrier-protein] ligase; Validated
Probab=71.19 E-value=56 Score=32.48 Aligned_cols=100 Identities=18% Similarity=0.118 Sum_probs=69.2
Q ss_pred CCCCcEEEeCCCC-------CeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCc--hhHHHHHHHHHHhCCeEeecC
Q 014952 38 FADRPCIINGPTG-------DVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNC--PQFVFAFLGASYIGATSTTAN 108 (415)
Q Consensus 38 ~p~~~a~~~~~~~-------~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~--~~~~~~~lA~~~~G~~~v~l~ 108 (415)
.++.++++...+| ..+|++.+...+..... ..++.++|++...+|-. ..+....+..+..|+..+...
T Consensus 181 ~~~d~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~---~~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~vv~~~ 257 (539)
T PRK06334 181 DPEDVAVILFTSGTEKLPKGVPLTHANLLANQRACLK---FFSPKEDDVMMSFLPPFHAYGFNSCTLFPLLSGVPVVFAY 257 (539)
T ss_pred CcCCEEEEEECCCCCCCCCEEEEcHHHHHHHHHHHHH---hcCCCCCceEEEecchHhhhhhHHHHHHHHHcCCeEEEec
Confidence 4677787754433 46899888766544433 34678899888777632 223334566777888877655
Q ss_pred CCCCHHHHHHHHHhcCceEEEEcccchHHHHh
Q 014952 109 PFYTPPEIAKQAIASKAKIIITQAVYNDKVRD 140 (415)
Q Consensus 109 ~~~~~~~~~~~l~~~~~~~vl~~~~~~~~~~~ 140 (415)
.....+.+...+++.++..+.........+..
T Consensus 258 ~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~ 289 (539)
T PRK06334 258 NPLYPKKIVEMIDEAKVTFLGSTPVFFDYILK 289 (539)
T ss_pred CCCCHHHHHHHHHHhCCcEEEecHHHHHHHHH
Confidence 45678889999999999999988877665543
No 163
>PRK13295 cyclohexanecarboxylate-CoA ligase; Reviewed
Probab=70.56 E-value=25 Score=34.95 Aligned_cols=98 Identities=20% Similarity=0.270 Sum_probs=69.8
Q ss_pred CCCCeEEEecCCCCCCCCceeeechHHHHHHHhhhhcCCCCCccCCCCcEEEEccchHHHHhhHHHHHHHHHcCcEEEEc
Q 014952 180 NPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIM 259 (415)
Q Consensus 180 ~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~l~~l~~G~~~v~~ 259 (415)
.++.+|++..-. +.++...+|...+...+..+...+. ..++.+++++...++-..-.-. .+++++..|+..+..
T Consensus 37 ~p~~~A~~~~~~---~~~~~~~~Ty~el~~~~~~~a~~L~-~~g~~~g~~Val~~~n~~e~~~--~~la~~~~G~~~vpl 110 (547)
T PRK13295 37 CPDKTAVTAVRL---GTGAPRRFTYRELAALVDRVAVGLA-RLGVGRGDVVSCQLPNWWEFTV--LYLACSRIGAVLNPL 110 (547)
T ss_pred CCCceEEEecCC---CccccceeeHHHHHHHHHHHHHHHH-HhCCCCCCEEEEECCCChHHHH--HHHHHHhcCcEEecc
Confidence 356677665322 2233457899988877666665443 3467889999998886664433 578999999999877
Q ss_pred CC-CCHHHHHHHHHhcCceeeecch
Q 014952 260 QK-FDIVKLMELVQKYKVTVAPFVP 283 (415)
Q Consensus 260 ~~-~~~~~~~~~l~~~~~t~l~~~p 283 (415)
++ ...+.+...++..++..+.+..
T Consensus 111 ~~~~~~~~l~~~l~~~~~~~li~~~ 135 (547)
T PRK13295 111 MPIFRERELSFMLKHAESKVLVVPK 135 (547)
T ss_pred ccccCHHHHHHHHHhcCceEEEEec
Confidence 64 6778889999999999887654
No 164
>PRK05857 acyl-CoA synthetase; Validated
Probab=70.51 E-value=23 Score=35.23 Aligned_cols=96 Identities=16% Similarity=0.170 Sum_probs=69.6
Q ss_pred CCCCeEEEecCCCCCCCCceeeechHHHHHHHhhhhcCCCCCccCCCCcEEEEccchHHHHhhHHHHHHHHHcCcEEEEc
Q 014952 180 NPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIM 259 (415)
Q Consensus 180 ~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~l~~l~~G~~~v~~ 259 (415)
.++.++++... | ...+|...+...+..+...+. ..++++++++..+++-+..+-. .+++++..|+..+.+
T Consensus 27 ~p~~~a~~~~~-~------~~~~Ty~el~~~~~~~a~~L~-~~g~~~g~~V~i~~~~~~e~~~--~~lA~~~~G~v~v~l 96 (540)
T PRK05857 27 QPEAIALRRCD-G------TSALRYRELVAEVGGLAADLR-AQSVSRGSRVLVISDNGPETYL--SVLACAKLGAIAVMA 96 (540)
T ss_pred CCCcEEEeecC-C------CceeeHHHHHHHHHHHHHHHH-HhCcCCCCEEEEEcCCCHHHHH--HHHHHHHcCeEEEec
Confidence 46667665432 2 145799988877766665443 3467889999888877654433 478999999999988
Q ss_pred CC-CCHHHHHHHHHhcCceeeecchHH
Q 014952 260 QK-FDIVKLMELVQKYKVTVAPFVPPI 285 (415)
Q Consensus 260 ~~-~~~~~~~~~l~~~~~t~l~~~p~~ 285 (415)
+. ...+.+.+.++..++..++..+..
T Consensus 97 ~~~~~~~~l~~~~~~~~~~~ii~~~~~ 123 (540)
T PRK05857 97 DGNLPIAAIERFCQITDPAAALVAPGS 123 (540)
T ss_pred CccCCHHHHHHHHHhcCCceEEEeccc
Confidence 64 678889999999998888877643
No 165
>PRK08315 AMP-binding domain protein; Validated
Probab=70.08 E-value=59 Score=32.31 Aligned_cols=95 Identities=14% Similarity=0.138 Sum_probs=66.7
Q ss_pred CCCcEEEeCCCC-------CeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCC--chhHHHHHHHHHHhCCeEeecCC
Q 014952 39 ADRPCIINGPTG-------DVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQN--CPQFVFAFLGASYIGATSTTANP 109 (415)
Q Consensus 39 p~~~a~~~~~~~-------~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~--~~~~~~~~lA~~~~G~~~v~l~~ 109 (415)
++.++++...++ ..+|++.+...+..+... .+++++|++....+- ...++..+++.+..|+..+....
T Consensus 198 ~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~---~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~~~~~~~ 274 (559)
T PRK08315 198 PDDPINIQYTSGTTGFPKGATLTHRNILNNGYFIGEA---MKLTEEDRLCIPVPLYHCFGMVLGNLACVTHGATMVYPGE 274 (559)
T ss_pred CCCcEEEEEcCCCCCCcceEEeeHHHHHHHHHHHHHh---cCCCCCceEEEecCcHHHHHHHHHHHHHHhccceEEEecC
Confidence 455555543332 467888887665554433 478899998887774 34455667888888988875555
Q ss_pred CCCHHHHHHHHHhcCceEEEEcccchH
Q 014952 110 FYTPPEIAKQAIASKAKIIITQAVYND 136 (415)
Q Consensus 110 ~~~~~~~~~~l~~~~~~~vl~~~~~~~ 136 (415)
...+..+...+.+.++..+........
T Consensus 275 ~~~~~~~~~~l~~~~~t~~~~~P~~~~ 301 (559)
T PRK08315 275 GFDPLATLAAVEEERCTALYGVPTMFI 301 (559)
T ss_pred CCCHHHHHHHHHHcCCeEEecchHHHH
Confidence 667888899999999999988766543
No 166
>PRK12583 acyl-CoA synthetase; Provisional
Probab=69.70 E-value=67 Score=31.90 Aligned_cols=95 Identities=19% Similarity=0.224 Sum_probs=66.6
Q ss_pred CCCcEEEeCCCC-------CeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCC--chhHHHHHHHHHHhCCeEeecCC
Q 014952 39 ADRPCIINGPTG-------DVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQN--CPQFVFAFLGASYIGATSTTANP 109 (415)
Q Consensus 39 p~~~a~~~~~~~-------~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~--~~~~~~~~lA~~~~G~~~v~l~~ 109 (415)
++..+++...++ ..+|+..+...+..+...+ +++++|++....+- ....+...++++..|+.++....
T Consensus 200 ~~~~a~i~~TSGsTG~PK~v~~s~~~l~~~~~~~~~~~---~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~v~~~~~ 276 (558)
T PRK12583 200 RDDPINIQYTSGTTGFPKGATLSHHNILNNGYFVAESL---GLTEHDRLCVPVPLYHCFGMVLANLGCMTVGACLVYPNE 276 (558)
T ss_pred CCCcEEEEECCCCCCCCceEEeeHHHHHHHHHHHHHHh---CCCCCCeEEEecCchhhhhHHHHHHHHHhcCceEEeecC
Confidence 455565533332 4689988866655554443 78899988777663 34556667888888988875455
Q ss_pred CCCHHHHHHHHHhcCceEEEEcccchH
Q 014952 110 FYTPPEIAKQAIASKAKIIITQAVYND 136 (415)
Q Consensus 110 ~~~~~~~~~~l~~~~~~~vl~~~~~~~ 136 (415)
......+...+.+.++.+++.......
T Consensus 277 ~~~~~~~~~~i~~~~~t~l~~~P~~~~ 303 (558)
T PRK12583 277 AFDPLATLQAVEEERCTALYGVPTMFI 303 (558)
T ss_pred CCCHHHHHHHHHHcCCeEEeccHHHHH
Confidence 567788889999999999988776543
No 167
>PRK07788 acyl-CoA synthetase; Validated
Probab=69.66 E-value=19 Score=35.77 Aligned_cols=86 Identities=19% Similarity=0.159 Sum_probs=65.4
Q ss_pred eechHHHHHHHhhhhcCCCCCccCCCCcEEEEccchHHHHhhHHHHHHHHHcCcEEEEcCC-CCHHHHHHHHHhcCceee
Q 014952 201 MLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIMQK-FDIVKLMELVQKYKVTVA 279 (415)
Q Consensus 201 ~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~l~~l~~G~~~v~~~~-~~~~~~~~~l~~~~~t~l 279 (415)
.+|...+...+..+...+. ..++.+++++...++-.- .+...+++++..|+..+..++ ...+.+...+++.++..+
T Consensus 74 ~~Ty~el~~~~~~la~~L~-~~gi~~gd~V~i~~~n~~--~~~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i 150 (549)
T PRK07788 74 TLTYAELDEQSNALARGLL-ALGVRAGDGVAVLARNHR--GFVLALYAAGKVGARIILLNTGFSGPQLAEVAAREGVKAL 150 (549)
T ss_pred ceeHHHHHHHHHHHHHHHH-HcCCCCCCEEEEEcCCCH--HHHHHHHHHHhcCCEEEEeCCCCCHHHHHHHHHhcCCcEE
Confidence 5788888776666655443 346788999988876654 333357899999999998875 678889999999999999
Q ss_pred ecchHHHHHH
Q 014952 280 PFVPPIVLAV 289 (415)
Q Consensus 280 ~~~p~~l~~l 289 (415)
+..+.....+
T Consensus 151 i~~~~~~~~~ 160 (549)
T PRK07788 151 VYDDEFTDLL 160 (549)
T ss_pred EECchhHHHH
Confidence 9887665544
No 168
>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]
Probab=69.47 E-value=28 Score=32.05 Aligned_cols=61 Identities=16% Similarity=0.141 Sum_probs=49.4
Q ss_pred HHHHcCCCCCCEEEEEcCCchhHHHHHHHHHHhCCeEeecCCCCCHHHHHHHHHhcCceEEEEcc
Q 014952 68 GLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGATSTTANPFYTPPEIAKQAIASKAKIIITQA 132 (415)
Q Consensus 68 ~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~vl~~~ 132 (415)
.|++.+++||++|+|..--..-+.+.++|-. .|+.++-++- .++-.....+.+++.++...
T Consensus 158 alk~~~~~pG~~V~I~G~GGlGh~avQ~Aka-~ga~Via~~~---~~~K~e~a~~lGAd~~i~~~ 218 (339)
T COG1064 158 ALKKANVKPGKWVAVVGAGGLGHMAVQYAKA-MGAEVIAITR---SEEKLELAKKLGADHVINSS 218 (339)
T ss_pred ehhhcCCCCCCEEEEECCcHHHHHHHHHHHH-cCCeEEEEeC---ChHHHHHHHHhCCcEEEEcC
Confidence 3666799999999999999999999999876 5588887764 34556677788999998876
No 169
>PRK07798 acyl-CoA synthetase; Validated
Probab=69.39 E-value=34 Score=33.62 Aligned_cols=87 Identities=13% Similarity=-0.054 Sum_probs=63.8
Q ss_pred eeechHHHHHHHhhhhcCCCCCccCCCCcEEEEccchHHHHhhHHHHHHHHHcCcEEEEcCC-CCHHHHHHHHHhcCcee
Q 014952 200 VMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIMQK-FDIVKLMELVQKYKVTV 278 (415)
Q Consensus 200 v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~l~~l~~G~~~v~~~~-~~~~~~~~~l~~~~~t~ 278 (415)
-.+|...+...+..+...+. ..++.+++++...++-.-. +...+++++..|+..+..+. ...+.+...+++.++..
T Consensus 27 ~~~ty~el~~~~~~la~~L~-~~g~~~~~~v~v~~~n~~~--~~~~~~a~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ 103 (533)
T PRK07798 27 RRLTYAELEERANRLAHYLI-AQGLGPGDHVGIYARNRIE--YVEAMLGAFKARAVPVNVNYRYVEDELRYLLDDSDAVA 103 (533)
T ss_pred ceeeHHHHHHHHHHHHHHHH-HcCCCCCCEEEEEcCCCHH--HHHHHHHHHhcCeEEEecCcCCCHHHHHHHHhhcCCCE
Confidence 45788888776666655443 3467888998888765543 33357899999999988864 67888999999999999
Q ss_pred eecchHHHHHH
Q 014952 279 APFVPPIVLAV 289 (415)
Q Consensus 279 l~~~p~~l~~l 289 (415)
++........+
T Consensus 104 ~~~~~~~~~~~ 114 (533)
T PRK07798 104 LVYEREFAPRV 114 (533)
T ss_pred EEEchhhHHHH
Confidence 98876654444
No 170
>PLN02565 cysteine synthase
Probab=68.75 E-value=71 Score=29.37 Aligned_cols=91 Identities=12% Similarity=0.036 Sum_probs=62.7
Q ss_pred CcEEEeCCCCCeeeHHHHHHHHHHHHHHHHHcCC-CCCCEEEEEcCCchhHHHHHHHHHHhCCeEeecCCCCCHHHHHHH
Q 014952 41 RPCIINGPTGDVYTYADVELTSRKVAAGLSKLGV-QKGDVIMLLLQNCPQFVFAFLGASYIGATSTTANPFYTPPEIAKQ 119 (415)
Q Consensus 41 ~~a~~~~~~~~~~Ty~el~~~~~~~a~~L~~~g~-~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~ 119 (415)
++.+-.+..+-+-||++= -+..+-..+.+.|. .+|....+....+-.-+...+++..+|..+..+-|...+......
T Consensus 31 ~i~~K~E~~nPtGSfKdR--~A~~~l~~~~~~g~~~~g~~~vv~aSsGN~g~alA~~a~~~G~~~~ivvp~~~~~~k~~~ 108 (322)
T PLN02565 31 RIAAKLEMMEPCSSVKDR--IGYSMITDAEEKGLIKPGESVLIEPTSGNTGIGLAFMAAAKGYKLIITMPASMSLERRII 108 (322)
T ss_pred eEEEEecccCCccchHHH--HHHHHHHHHHHcCCCCCCCcEEEEECCChHHHHHHHHHHHcCCeEEEEeCCCCcHHHHHH
Confidence 455555433455566654 23333334445564 678554555555556666777888899999988888888999999
Q ss_pred HHhcCceEEEEccc
Q 014952 120 AIASKAKIIITQAV 133 (415)
Q Consensus 120 l~~~~~~~vl~~~~ 133 (415)
++..++++++++..
T Consensus 109 i~~~GA~V~~~~~~ 122 (322)
T PLN02565 109 LLAFGAELVLTDPA 122 (322)
T ss_pred HHHcCCEEEEeCCC
Confidence 99999999998863
No 171
>PLN02614 long-chain acyl-CoA synthetase
Probab=68.74 E-value=48 Score=34.05 Aligned_cols=88 Identities=7% Similarity=-0.060 Sum_probs=67.2
Q ss_pred eeechHHHHHHHhhhhcCCCCCccCCCCcEEEEccchHHHHhhHHHHHHHHHcCcEEEEcCC-CCHHHHHHHHHhcCcee
Q 014952 200 VMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIMQK-FDIVKLMELVQKYKVTV 278 (415)
Q Consensus 200 v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~l~~l~~G~~~v~~~~-~~~~~~~~~l~~~~~t~ 278 (415)
..+|...+...+..+...+. ..++.++|++...++-..-+-. ..++++..|+..+.+.+ ..++.+...+++.++.+
T Consensus 78 ~~~Ty~el~~~v~~lA~~L~-~~Gv~~Gd~Vai~~~n~~e~~~--~~lA~~~~Gav~vpl~~~~~~~~l~~il~~~~~~~ 154 (666)
T PLN02614 78 VWQTYQEVYDIVIKLGNSLR-SVGVKDEAKCGIYGANSPEWII--SMEACNAHGLYCVPLYDTLGAGAVEFIISHSEVSI 154 (666)
T ss_pred EEeEHHHHHHHHHHHHHHHH-HcCCCCCCEEEEEcCCCHHHHH--HHHHHHHcCCEEEEecCCCCHHHHHHHHhccCCCE
Confidence 34688888777766665443 4578899999998887654333 57899999999988864 78889999999999999
Q ss_pred eecchHHHHHHH
Q 014952 279 APFVPPIVLAVA 290 (415)
Q Consensus 279 l~~~p~~l~~l~ 290 (415)
++.....+..+.
T Consensus 155 vi~~~~~~~~~~ 166 (666)
T PLN02614 155 VFVEEKKISELF 166 (666)
T ss_pred EEECHHHHHHHH
Confidence 998776655443
No 172
>PLN02387 long-chain-fatty-acid-CoA ligase family protein
Probab=68.25 E-value=31 Score=35.65 Aligned_cols=104 Identities=12% Similarity=0.077 Sum_probs=75.3
Q ss_pred eeechHHHHHHHhhhhcCCCCCccCCCCcEEEEccchHHHHhhHHHHHHHHHcCcEEEEcC-CCCHHHHHHHHHhcCcee
Q 014952 200 VMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIMQ-KFDIVKLMELVQKYKVTV 278 (415)
Q Consensus 200 v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~l~~l~~G~~~v~~~-~~~~~~~~~~l~~~~~t~ 278 (415)
..+|...+...+..+...+. ..++.+++++..+++-..-+- ...++++..|+..+.+. ...++.+...+++.++.+
T Consensus 105 ~~~Ty~el~~~v~~lA~~L~-~lG~~~gd~Vai~~~n~~e~~--~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~~~ 181 (696)
T PLN02387 105 EWITYGQVFERVCNFASGLV-ALGHNKEERVAIFADTRAEWL--IALQGCFRQNITVVTIYASLGEEALCHSLNETEVTT 181 (696)
T ss_pred EEEEHHHHHHHHHHHHHHHH-HhCCCCCCEEEEEcCCCHHHH--HHHHHHHHcCCeEEEecCCCCHHHHHHHHHccCCCE
Confidence 45788888877766665443 456789999988887654333 35788999999998775 478899999999999999
Q ss_pred eecchHHHHHHHcCCCCCCCCcccceeeeecC
Q 014952 279 APFVPPIVLAVAKSGDVDKYDMSSIRTVMSGA 310 (415)
Q Consensus 279 l~~~p~~l~~l~~~~~~~~~~l~~lr~v~~gG 310 (415)
+++....+..+.+... .+++++.+++-+
T Consensus 182 li~~~~~~~~l~~~~~----~~~~l~~ii~~~ 209 (696)
T PLN02387 182 VICDSKQLKKLIDISS----QLETVKRVIYMD 209 (696)
T ss_pred EEECHHHHHHHHHHhh----ccCCceEEEEEC
Confidence 9998887776654321 234566555543
No 173
>COG0399 WecE Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=68.24 E-value=52 Score=30.91 Aligned_cols=85 Identities=20% Similarity=0.253 Sum_probs=55.4
Q ss_pred HHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHHhCCeEeecCCC-----CCHHHHHHHHHh-cCceEEEEc---cc
Q 014952 63 RKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGATSTTANPF-----YTPPEIAKQAIA-SKAKIIITQ---AV 133 (415)
Q Consensus 63 ~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~-----~~~~~~~~~l~~-~~~~~vl~~---~~ 133 (415)
..+.-.|+.+++++||-|.+ .+..++.+.=++...|+.+|.+|-+ .+.+.++..+.. +++.+.+-- ..
T Consensus 60 ~AL~laL~al~ig~GDeVI~---ps~TfvATan~i~~~Ga~PVFvDid~~T~nid~~~ie~aIt~~tKAIipVhl~G~~~ 136 (374)
T COG0399 60 AALHLALLALAIGPGDEVIV---PSFTFVATANAVLLVGAKPVFVDIDPDTLNIDPDLIEAAITPRTKAIIPVHLAGQPC 136 (374)
T ss_pred HHHHHHHHhcCCCCCCEEEe---cCCchHHHHHHHHHcCCeEEEEecCCcccCCCHHHHHHHcccCCeEEEEehhccCCC
Confidence 33444566668999995543 3667899999999999999998743 456777777766 343333321 23
Q ss_pred chHHHHhhhhhcCceEE
Q 014952 134 YNDKVRDLSEHHGARIV 150 (415)
Q Consensus 134 ~~~~~~~~~~~~~~~~i 150 (415)
..+.+.++....++.+|
T Consensus 137 dm~~i~~la~~~~l~vI 153 (374)
T COG0399 137 DMDAIMALAKRHGLPVI 153 (374)
T ss_pred CHHHHHHHHHHcCCeEE
Confidence 45566666655555443
No 174
>PRK05677 long-chain-fatty-acid--CoA ligase; Validated
Probab=68.19 E-value=31 Score=34.46 Aligned_cols=85 Identities=14% Similarity=0.121 Sum_probs=64.4
Q ss_pred eeechHHHHHHHhhhhcCCCCCccCCCCcEEEEccchHHHHhhHHHHHHHHHcCcEEEEcCC-CCHHHHHHHHHhcCcee
Q 014952 200 VMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIMQK-FDIVKLMELVQKYKVTV 278 (415)
Q Consensus 200 v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~l~~l~~G~~~v~~~~-~~~~~~~~~l~~~~~t~ 278 (415)
..+|...+...+..+...+....++.+++++...+|-..-+-. .+++++..|+..+..++ +..+.+...+++.++..
T Consensus 48 ~~~Ty~el~~~~~~la~~L~~~~gi~~gd~Vai~~~n~~~~~~--~~la~~~~Ga~~v~l~~~~~~~~l~~~l~~~~~~~ 125 (562)
T PRK05677 48 KTLTYGELYKLSGAFAAWLQQHTDLKPGDRIAVQLPNVLQYPV--AVFGAMRAGLIVVNTNPLYTAREMEHQFNDSGAKA 125 (562)
T ss_pred ceeeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHH--HHHHHHHcCeEEeecCCCCCHHHHHHHHhccCceE
Confidence 3579999888777776644312367889999999887654433 47899999999998864 67888999999999999
Q ss_pred eecchHHH
Q 014952 279 APFVPPIV 286 (415)
Q Consensus 279 l~~~p~~l 286 (415)
++......
T Consensus 126 ii~~~~~~ 133 (562)
T PRK05677 126 LVCLANMA 133 (562)
T ss_pred EEEecchh
Confidence 88765443
No 175
>PLN02246 4-coumarate--CoA ligase
Probab=67.43 E-value=33 Score=34.02 Aligned_cols=98 Identities=15% Similarity=0.123 Sum_probs=69.0
Q ss_pred CCCCeEEEecCCCCCCCCceeeechHHHHHHHhhhhcCCCCCccCCCCcEEEEccchHHHHhhHHHHHHHHHcCcEEEEc
Q 014952 180 NPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIM 259 (415)
Q Consensus 180 ~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~l~~l~~G~~~v~~ 259 (415)
.++.++++... ++..+|+..+......+...+. ..++.+++++....+-+. .+...+++++..|+..+.+
T Consensus 36 ~~~~~a~~~~~-------~~~~~ty~el~~~~~~la~~L~-~~g~~~gd~V~i~~~~~~--~~~~~~la~~~~G~~~v~l 105 (537)
T PLN02246 36 FSDRPCLIDGA-------TGRVYTYADVELLSRRVAAGLH-KLGIRQGDVVMLLLPNCP--EFVLAFLGASRRGAVTTTA 105 (537)
T ss_pred CCCCeEEEecC-------CCceeeHHHHHHHHHHHHHHHH-HhCCCCCCEEEEECCCCh--HHHHHHHHHHHcCEEEecC
Confidence 45667765321 1246888888776666555433 346788999988876654 3333578899999999988
Q ss_pred CC-CCHHHHHHHHHhcCceeeecchHHHH
Q 014952 260 QK-FDIVKLMELVQKYKVTVAPFVPPIVL 287 (415)
Q Consensus 260 ~~-~~~~~~~~~l~~~~~t~l~~~p~~l~ 287 (415)
++ .....+...++..++..++.......
T Consensus 106 ~~~~~~~~l~~~l~~~~~~~li~~~~~~~ 134 (537)
T PLN02246 106 NPFYTPAEIAKQAKASGAKLIITQSCYVD 134 (537)
T ss_pred CCCCCHHHHHHHHHhcCCcEEEEccchHH
Confidence 64 67788999999999998887665444
No 176
>PLN03051 acyl-activating enzyme; Provisional
Probab=67.40 E-value=46 Score=32.63 Aligned_cols=98 Identities=13% Similarity=-0.043 Sum_probs=65.7
Q ss_pred CCCcEEEeCCCC-------CeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCch-hHHHHHHHHHHhCCeEeecCCC
Q 014952 39 ADRPCIINGPTG-------DVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCP-QFVFAFLGASYIGATSTTANPF 110 (415)
Q Consensus 39 p~~~a~~~~~~~-------~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~-~~~~~~lA~~~~G~~~v~l~~~ 110 (415)
++.++++...++ ..+|++.+...+.... ...++.++|++....+-.- .....+++.+..|+..+..+..
T Consensus 118 ~~d~a~i~yTSGTTG~PKgV~~sh~~~~~~~~~~~---~~~~~~~~d~~l~~~pl~h~~g~~~~~~~l~~G~t~v~~~~~ 194 (499)
T PLN03051 118 VESVTNILFSSGTTGEPKAIPWTHLSPLRCASDGW---AHMDIQPGDVVCWPTNLGWMMGPWLLYSAFLNGATLALYGGA 194 (499)
T ss_pred ccceEEEEeCCCCCCCCceEEEccchHHHHHHHHH---HhcCCCCCCEEEEccCcceeeehHHHHHHHHcCCEEEecCCC
Confidence 466777654332 4678877655443322 3347888998776666322 1233567788899998877654
Q ss_pred CCHHHHHHHHHhcCceEEEEcccchHHHH
Q 014952 111 YTPPEIAKQAIASKAKIIITQAVYNDKVR 139 (415)
Q Consensus 111 ~~~~~~~~~l~~~~~~~vl~~~~~~~~~~ 139 (415)
...+.+...+++.++.++.........+.
T Consensus 195 ~~~~~~~~~i~~~~vt~~~~vP~~~~~l~ 223 (499)
T PLN03051 195 PLGRGFGKFVQDAGVTVLGLVPSIVKAWR 223 (499)
T ss_pred CCcHHHHHHHHHhCCcEEEeCHHHHHHHH
Confidence 56688899999999999998877665543
No 177
>PRK13388 acyl-CoA synthetase; Provisional
Probab=66.94 E-value=35 Score=33.89 Aligned_cols=95 Identities=9% Similarity=-0.094 Sum_probs=67.7
Q ss_pred CCCeEEEecCCCCCCCCceeeechHHHHHHHhhhhcCCCCCccC-CCCcEEEEccchHHHHhhHHHHHHHHHcCcEEEEc
Q 014952 181 PDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYL-HKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIM 259 (415)
Q Consensus 181 ~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~pl~~~~g~~~~~l~~l~~G~~~v~~ 259 (415)
++.+|++.. +..+|...+......+...+. ..+. .+++++...++-+.-.- ..+++++..|+..+.+
T Consensus 15 p~~~Al~~~---------~~~lTy~el~~~~~~la~~L~-~~g~~~~~~~V~i~~~n~~~~v--~~~lA~~~~Ga~~v~l 82 (540)
T PRK13388 15 DDTIAVRYG---------DRTWTWREVLAEAAARAAALI-ALADPDRPLHVGVLLGNTPEML--FWLAAAALGGYVLVGL 82 (540)
T ss_pred CCceEEEEC---------CceeeHHHHHHHHHHHHHHHH-HhcCCCCCCEEEEECCCCcHHH--HHHHHHHhCCCEEEEe
Confidence 566776541 236788888877666655433 3345 57888888887655433 2578999999999987
Q ss_pred CC-CCHHHHHHHHHhcCceeeecchHHHH
Q 014952 260 QK-FDIVKLMELVQKYKVTVAPFVPPIVL 287 (415)
Q Consensus 260 ~~-~~~~~~~~~l~~~~~t~l~~~p~~l~ 287 (415)
++ ...+.+...+++.++.+++.......
T Consensus 83 ~p~~~~~~l~~~l~~~~~~~~i~~~~~~~ 111 (540)
T PRK13388 83 NTTRRGAALAADIRRADCQLLVTDAEHRP 111 (540)
T ss_pred cccCChHHHHHHHHhcCCCEEEEChhhhH
Confidence 64 67788999999999999988665543
No 178
>PLN02574 4-coumarate--CoA ligase-like
Probab=66.50 E-value=38 Score=33.80 Aligned_cols=101 Identities=21% Similarity=0.238 Sum_probs=71.4
Q ss_pred CCCCeEEEecCCCCCCCCceeeechHHHHHHHhhhhcCCCCCccCCCCcEEEEccchHHHHhhHHHHHHHHHcCcEEEEc
Q 014952 180 NPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIM 259 (415)
Q Consensus 180 ~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~l~~l~~G~~~v~~ 259 (415)
.++.++++... ++ ..+|...+......+...+....+++++|++....+-... +...+++++..|+..+..
T Consensus 52 ~~~~~a~~~~~---~~----~~~Ty~el~~~~~~lA~~L~~~~G~~~gd~V~i~~~n~~~--~~~~~la~~~~G~v~v~l 122 (560)
T PLN02574 52 HNGDTALIDSS---TG----FSISYSELQPLVKSMAAGLYHVMGVRQGDVVLLLLPNSVY--FPVIFLAVLSLGGIVTTM 122 (560)
T ss_pred cCCCCEEEECC---CC----CcccHHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCcch--HHHHHHHHHHhCeEEeCc
Confidence 45666666422 22 2468888877776666654311568899999999876543 333578999999999888
Q ss_pred CC-CCHHHHHHHHHhcCceeeecchHHHHHH
Q 014952 260 QK-FDIVKLMELVQKYKVTVAPFVPPIVLAV 289 (415)
Q Consensus 260 ~~-~~~~~~~~~l~~~~~t~l~~~p~~l~~l 289 (415)
++ .....+...+++.++..++..+.....+
T Consensus 123 ~p~~~~~~l~~~l~~~~~~~~~~~~~~~~~~ 153 (560)
T PLN02574 123 NPSSSLGEIKKRVVDCSVGLAFTSPENVEKL 153 (560)
T ss_pred CcccCHHHHHHHHHhcCCEEEEECHHHHHHH
Confidence 65 6778899999999999888877655444
No 179
>PRK10524 prpE propionyl-CoA synthetase; Provisional
Probab=65.71 E-value=41 Score=34.20 Aligned_cols=98 Identities=17% Similarity=0.231 Sum_probs=70.6
Q ss_pred CCCCeEEEecCCCCCCCCceeeechHHHHHHHhhhhcCCCCCccCCCCcEEEEccchHHHHhhHHHHHHHHHcCcEEEEc
Q 014952 180 NPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIM 259 (415)
Q Consensus 180 ~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~l~~l~~G~~~v~~ 259 (415)
.++.+|++.. +..+| ....+|...+...+..+...+. ..+..++|++..++|..--.-. .+++++..|+..+.+
T Consensus 66 ~p~~~A~~~~-~~~~~--~~~~~Ty~eL~~~v~~lA~~L~-~~Gv~~gd~V~i~~~n~~e~~~--~~lA~~~~Gav~v~~ 139 (629)
T PRK10524 66 RPEQLALIAV-STETD--EERTYTFRQLHDEVNRMAAMLR-SLGVQRGDRVLIYMPMIAEAAF--AMLACARIGAIHSVV 139 (629)
T ss_pred CCCCeEEEEE-cCCCC--ceEEEeHHHHHHHHHHHHHHHH-HcCCCCCCEEEEECCCCHHHHH--HHHHHHHhCcEEEee
Confidence 4567776643 22222 2346788888877666655443 4578899999999987654433 478999999998877
Q ss_pred C-CCCHHHHHHHHHhcCceeeecch
Q 014952 260 Q-KFDIVKLMELVQKYKVTVAPFVP 283 (415)
Q Consensus 260 ~-~~~~~~~~~~l~~~~~t~l~~~p 283 (415)
+ .+.+..+...++..++.+++...
T Consensus 140 ~~~~~~~~l~~~l~~~~~~~li~~~ 164 (629)
T PRK10524 140 FGGFASHSLAARIDDAKPVLIVSAD 164 (629)
T ss_pred CCCCCHHHHHHHHHhcCCcEEEEcc
Confidence 5 47888999999999999988754
No 180
>COG0365 Acs Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases [Lipid metabolism]
Probab=65.68 E-value=24 Score=34.82 Aligned_cols=102 Identities=17% Similarity=0.075 Sum_probs=73.7
Q ss_pred CCCeEEEecCCCCCCCCceeeechHHHHHHHhhhhcCCCCCccCCCCcEEEEccchHHHHhhHHHHHHHHHcCcEEEEc-
Q 014952 181 PDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIM- 259 (415)
Q Consensus 181 ~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~l~~l~~G~~~v~~- 259 (415)
+++.|+|.- +-.++. -.+|.+.+..........+....+. ++|++..++|..--+-. .+|+++..|+....+
T Consensus 24 ~~~~aii~~-~e~~~~---~~~Ty~~L~~~v~r~A~~L~~~~gv-kGDrV~iymp~~pe~~~--a~LA~~riGAI~~~vf 96 (528)
T COG0365 24 PDDTAIIFD-GEDGLF---RELTYGDLRREVARLANALKDLGGV-KGDRVAIYMPNSPEAVI--ALLATARIGAIPAVVS 96 (528)
T ss_pred CCceEEEEE-cCCCCc---eEEEHHHHHHHHHHHHHHHHHhCCC-CCCEEEEEcCCCHHHHH--HHHHHHHcCCEEeecc
Confidence 345555543 333333 6778888877766666644323446 99999999999775554 478999999987666
Q ss_pred CCCCHHHHHHHHHhcCceeeecchHHHHHH
Q 014952 260 QKFDIVKLMELVQKYKVTVAPFVPPIVLAV 289 (415)
Q Consensus 260 ~~~~~~~~~~~l~~~~~t~l~~~p~~l~~l 289 (415)
+.+.++.+..-+...++.+++.....++..
T Consensus 97 ~~f~~~al~~Ri~d~~~k~vit~d~~~~~g 126 (528)
T COG0365 97 PGLSAEAVADRIADLGPKVLIADDGTFRNG 126 (528)
T ss_pred cCCCHHHHHHHHHccCCCEEEEeccccccc
Confidence 468999999999999999999877666544
No 181
>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]
Probab=65.48 E-value=54 Score=29.89 Aligned_cols=76 Identities=9% Similarity=0.097 Sum_probs=59.3
Q ss_pred HHHHcCCCCCCEEEEEcCCchhHHHHHHHHHHhCCeEeecCCCCCHHHHHHHHHhcCceEEEEcccchHHHHhhhhhcC
Q 014952 68 GLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGATSTTANPFYTPPEIAKQAIASKAKIIITQAVYNDKVRDLSEHHG 146 (415)
Q Consensus 68 ~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~ 146 (415)
-|++.|+++|.+|+|..--..-++...+|.+ -|.-+..++.. ....++.++..+++.-+...+..+.+.++....+
T Consensus 173 pLk~~g~~pG~~vgI~GlGGLGh~aVq~AKA-MG~rV~vis~~--~~kkeea~~~LGAd~fv~~~~d~d~~~~~~~~~d 248 (360)
T KOG0023|consen 173 PLKRSGLGPGKWVGIVGLGGLGHMAVQYAKA-MGMRVTVISTS--SKKKEEAIKSLGADVFVDSTEDPDIMKAIMKTTD 248 (360)
T ss_pred hhHHcCCCCCcEEEEecCcccchHHHHHHHH-hCcEEEEEeCC--chhHHHHHHhcCcceeEEecCCHHHHHHHHHhhc
Confidence 4677899999999999999999999999988 57777777653 3455667888899998888777676666654433
No 182
>PRK08279 long-chain-acyl-CoA synthetase; Validated
Probab=65.41 E-value=41 Score=33.90 Aligned_cols=97 Identities=14% Similarity=0.064 Sum_probs=69.6
Q ss_pred CCCCeEEEecCCCCCCCCceeeechHHHHHHHhhhhcCCCCCccCCCCcEEEEccchHHHHhhHHHHHHHHHcCcEEEEc
Q 014952 180 NPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIM 259 (415)
Q Consensus 180 ~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~l~~l~~G~~~v~~ 259 (415)
.++.++++.- ...+|...+...+......+. ..+..+++++....+-...+ ...+++++..|+..+..
T Consensus 50 ~p~~~Ai~~~---------~~~~Ty~eL~~~~~~la~~L~-~~g~~~gd~V~i~~~n~~~~--v~~~lA~~~~G~~~v~l 117 (600)
T PRK08279 50 HPDRPALLFE---------DQSISYAELNARANRYAHWAA-ARGVGKGDVVALLMENRPEY--LAAWLGLAKLGAVVALL 117 (600)
T ss_pred CCCCcEEEeC---------CCcccHHHHHHHHHHHHHHHH-hcCCCCCCEEEEECCCCHHH--HHHHHHHHhcCcEEeec
Confidence 4566666541 235788888877666655443 34678899998888766533 33588999999999887
Q ss_pred CC-CCHHHHHHHHHhcCceeeecchHHHHH
Q 014952 260 QK-FDIVKLMELVQKYKVTVAPFVPPIVLA 288 (415)
Q Consensus 260 ~~-~~~~~~~~~l~~~~~t~l~~~p~~l~~ 288 (415)
+. ...+.+...+++.++..++........
T Consensus 118 ~~~~~~~~l~~~l~~~~~~~li~~~~~~~~ 147 (600)
T PRK08279 118 NTQQRGAVLAHSLNLVDAKHLIVGEELVEA 147 (600)
T ss_pred CCCCCHHHHHHHHHhcCCCEEEEChHHHHH
Confidence 64 677888999999999999887655443
No 183
>PLN02330 4-coumarate--CoA ligase-like 1
Probab=64.53 E-value=32 Score=34.16 Aligned_cols=98 Identities=16% Similarity=0.109 Sum_probs=69.3
Q ss_pred CCCCeEEEecCCCCCCCCceeeechHHHHHHHhhhhcCCCCCccCCCCcEEEEccchHHHHhhHHHHHHHHHcCcEEEEc
Q 014952 180 NPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIM 259 (415)
Q Consensus 180 ~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~l~~l~~G~~~v~~ 259 (415)
.++.++++.... +..+|...+...+..+...+. ..+..+++++...++-...+-. .+++++..|+..+..
T Consensus 41 ~p~~~a~~~~~~-------~~~~Ty~~l~~~~~~la~~L~-~~g~~~g~~V~i~~~~~~~~~~--~~lA~~~~G~~~vpl 110 (546)
T PLN02330 41 YADKVAFVEAVT-------GKAVTYGEVVRDTRRFAKALR-SLGLRKGQVVVVVLPNVAEYGI--VALGIMAAGGVFSGA 110 (546)
T ss_pred CCCccEEEecCC-------CCcccHHHHHHHHHHHHHHHH-HhCCCCCCEEEEECCCchHHHH--HHHHHHHhCcEeccC
Confidence 456666653221 246789988877766665443 3467888999888776654333 478999999998877
Q ss_pred CC-CCHHHHHHHHHhcCceeeecchHHHH
Q 014952 260 QK-FDIVKLMELVQKYKVTVAPFVPPIVL 287 (415)
Q Consensus 260 ~~-~~~~~~~~~l~~~~~t~l~~~p~~l~ 287 (415)
+. .....+...+++.++..+......+.
T Consensus 111 ~~~~~~~~l~~~l~~~~~~~~i~~~~~~~ 139 (546)
T PLN02330 111 NPTALESEIKKQAEAAGAKLIVTNDTNYG 139 (546)
T ss_pred CccCCHHHHHHHHHhcCCeEEEEccchhh
Confidence 64 57788999999999998877655443
No 184
>PRK05850 acyl-CoA synthetase; Validated
Probab=64.11 E-value=52 Score=32.96 Aligned_cols=104 Identities=15% Similarity=0.105 Sum_probs=70.5
Q ss_pred CCCCeEEEecCC-C-CCCCCceeeechHHHHHHHhhhhcCCCCCccCCCCcEEEEccchHHHHhhHHHHHHHHHcCcEEE
Q 014952 180 NPDDVVALPYSS-G-TTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAIL 257 (415)
Q Consensus 180 ~~~~~a~i~~TS-G-tTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~l~~l~~G~~~v 257 (415)
.++.++++.... + ..|. ...+|...+...+..+...+. ..+ .+++++...++-+. .+...+++++..|+.++
T Consensus 14 ~p~~~a~~~~~~~~~~~~~--~~~lty~eL~~~v~~~A~~L~-~~g-~~gd~V~l~~~n~~--~~~~~~lA~~~~G~v~v 87 (578)
T PRK05850 14 QPDDAAFTFIDYEQDPAGV--AETLTWSQLYRRTLNVAEELR-RHG-STGDRAVILAPQGL--EYIVAFLGALQAGLIAV 87 (578)
T ss_pred CCCceEEEEEccCCCCCCc--eeeecHHHHHHHHHHHHHHHH-HhC-CCCCEEEEEcCCcc--cHHHHHHHHHHcCceEE
Confidence 456666654311 1 1121 356888888776666655443 223 46899888888654 33335899999999999
Q ss_pred EcCC----CCHHHHHHHHHhcCceeeecchHHHHHH
Q 014952 258 IMQK----FDIVKLMELVQKYKVTVAPFVPPIVLAV 289 (415)
Q Consensus 258 ~~~~----~~~~~~~~~l~~~~~t~l~~~p~~l~~l 289 (415)
..+. ...+.+...+++.++.+++..+.....+
T Consensus 88 pl~~~~~~~~~~~l~~~l~~~~~~~il~~~~~~~~~ 123 (578)
T PRK05850 88 PLSVPQGGAHDERVSAVLRDTSPSVVLTTSAVVDDV 123 (578)
T ss_pred ecCCCCccchHHHHHHHHHhcCCCEEEEcHHHHHHH
Confidence 8864 3567899999999999999887766544
No 185
>PRK13383 acyl-CoA synthetase; Provisional
Probab=63.84 E-value=30 Score=34.08 Aligned_cols=86 Identities=7% Similarity=0.004 Sum_probs=64.6
Q ss_pred eechHHHHHHHhhhhcCCCCCccCCCCcEEEEccchHHHHhhHHHHHHHHHcCcEEEEcCC-CCHHHHHHHHHhcCceee
Q 014952 201 MLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIMQK-FDIVKLMELVQKYKVTVA 279 (415)
Q Consensus 201 ~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~l~~l~~G~~~v~~~~-~~~~~~~~~l~~~~~t~l 279 (415)
.+|...+...+..+...+. ..+..+++++...++-.-.. ...+++++..|+..+..++ ...+.+...+++.++..+
T Consensus 60 ~lTy~el~~~~~~la~~L~-~~gi~~g~~V~i~~~~~~~~--~~~~la~~~~G~v~vpl~~~~~~~~l~~~l~~~~~~~i 136 (516)
T PRK13383 60 ALSYRELQRATESLARRLT-RDGVAPGRAVGVMCRNGRGF--VTAVFAVGLLGADVVPISTEFRSDALAAALRAHHISTV 136 (516)
T ss_pred cEeHHHHHHHHHHHHHHHH-hcCCCCCCEEEEECCCCHHH--HHHHHHHHHhCeEEEEcCccCCHHHHHHHHhcCCCCEE
Confidence 4788888776666665443 34678899998888754432 2357889999999998865 678899999999999999
Q ss_pred ecchHHHHHH
Q 014952 280 PFVPPIVLAV 289 (415)
Q Consensus 280 ~~~p~~l~~l 289 (415)
+..+.....+
T Consensus 137 i~~~~~~~~~ 146 (516)
T PRK13383 137 VADNEFAERI 146 (516)
T ss_pred EEchhHHHHH
Confidence 9887665544
No 186
>cd01445 TST_Repeats Thiosulfate sulfurtransferases (TST) contain 2 copies of the Rhodanese Homology Domain. Only the second repeat contains the catalytically active Cys residue. The role of the 1st repeat is uncertain, but believed to be involved in protein interaction. This CD aligns the 1st and 2nd repeats.
Probab=63.67 E-value=23 Score=27.87 Aligned_cols=43 Identities=14% Similarity=0.076 Sum_probs=34.6
Q ss_pred HHHHHHHHHcCCCCCCEEEEEcCC---chhHHHHHHHHHHhCCeEe
Q 014952 63 RKVAAGLSKLGVQKGDVIMLLLQN---CPQFVFAFLGASYIGATST 105 (415)
Q Consensus 63 ~~~a~~L~~~g~~~g~~V~i~~~~---~~~~~~~~lA~~~~G~~~v 105 (415)
+.+++.|.++|+.+++.|.+++.. ......+.+++..+|..-+
T Consensus 81 ~~~~~~~~~~GI~~~~~vVvY~~~~~~g~~A~r~~~~l~~~G~~~v 126 (138)
T cd01445 81 AEFAAMFEAKGIDLDKHLIATDGDDLGGFTACHIALAARLCGHPDV 126 (138)
T ss_pred HHHHHHHHHcCCCCCCeEEEECCCCCcchHHHHHHHHHHHcCCCCe
Confidence 467888999999999999999975 5666777888888886643
No 187
>PTZ00342 acyl-CoA synthetase; Provisional
Probab=63.23 E-value=73 Score=33.27 Aligned_cols=120 Identities=13% Similarity=0.141 Sum_probs=80.5
Q ss_pred CCCCeEEEecCCCCCCCCceeeechHHHHHHHhhhhcCCCCC--ccCCCC-----------cEEEEccchHHHHhhHHHH
Q 014952 180 NPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPN--LYLHKE-----------DVILCVLPLFHIYSLNSVL 246 (415)
Q Consensus 180 ~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~--~~~~~~-----------~~~~~~~pl~~~~g~~~~~ 246 (415)
.++.+|++....| .+ -..+|...+...+..+...+... .++.++ +++..+.+-..- +....
T Consensus 74 ~p~~~Al~~~~~g---~~-~~~~Ty~el~~~v~~~A~~L~~~~~~Gv~~g~~~~~~~~g~~d~V~i~~~N~~e--w~~~~ 147 (746)
T PTZ00342 74 NNNKIAIVEHSCG---EP-QNYITYGNFFKKVLSFSHSLNTYEGKGIPEKKYNEEQNNGKFKLLGLYGSNSIN--WLVAD 147 (746)
T ss_pred cCCceeEeccCCC---CC-ceeeeHHHHHHHHHHHHHHHHHHhhcCCCcCccccccccccccEEEEEcCCCHH--HHHHH
Confidence 4567776533212 11 24578888887776666644311 256666 788887765443 22357
Q ss_pred HHHHHcCcEEEEcC-CCCHHHHHHHHHhcCceeeecchHHHHHHHcCCCCCCCCcccceeeeec
Q 014952 247 LCALRVGAAILIMQ-KFDIVKLMELVQKYKVTVAPFVPPIVLAVAKSGDVDKYDMSSIRTVMSG 309 (415)
Q Consensus 247 l~~l~~G~~~v~~~-~~~~~~~~~~l~~~~~t~l~~~p~~l~~l~~~~~~~~~~l~~lr~v~~g 309 (415)
++++..|+..+.+. .+.++.+...+++.++.++++....+..+.+... .++.++.+++-
T Consensus 148 lA~~~~Gav~Vpl~~~~~~~el~~il~~s~~~~lv~~~~~~~~l~~~~~----~~~~l~~ii~~ 207 (746)
T PTZ00342 148 LACMLSGVTTLVMHSKFSIDVIVDILNETKLEWLCLDLDLVEGLLERKN----ELPHLKKLIIL 207 (746)
T ss_pred HHHHHcCCeEEEecCCCCHHHHHHHHhcCCCCEEEEcHHHHHHHHHhhc----cCCCceEEEEE
Confidence 88999999988875 5889999999999999999988877777654321 24567666554
No 188
>PRK06155 crotonobetaine/carnitine-CoA ligase; Provisional
Probab=63.15 E-value=32 Score=34.21 Aligned_cols=86 Identities=10% Similarity=0.058 Sum_probs=66.4
Q ss_pred eechHHHHHHHhhhhcCCCCCccCCCCcEEEEccchHHHHhhHHHHHHHHHcCcEEEEcCC-CCHHHHHHHHHhcCceee
Q 014952 201 MLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIMQK-FDIVKLMELVQKYKVTVA 279 (415)
Q Consensus 201 ~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~l~~l~~G~~~v~~~~-~~~~~~~~~l~~~~~t~l 279 (415)
.+|...+...+..+...+. ..+..+++++....|-...+- ..+++++..|+..+..++ ...+++...+++.+++.+
T Consensus 46 ~~Ty~el~~~v~~la~~L~-~~gi~~g~~V~v~~~n~~~~~--~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~l 122 (542)
T PRK06155 46 RWTYAEAARAAAAAAHALA-AAGVKRGDRVALMCGNRIEFL--DVFLGCAWLGAIAVPINTALRGPQLEHILRNSGARLL 122 (542)
T ss_pred cccHHHHHHHHHHHHHHHH-HcCCCCCCEEEEECCCChHHH--HHHHHHHHhCCEEEEeccccCHHHHHHHHHhcCceEE
Confidence 5788888777766665443 346788999988887766443 358999999999998864 688899999999999999
Q ss_pred ecchHHHHHH
Q 014952 280 PFVPPIVLAV 289 (415)
Q Consensus 280 ~~~p~~l~~l 289 (415)
+........+
T Consensus 123 ~~~~~~~~~~ 132 (542)
T PRK06155 123 VVEAALLAAL 132 (542)
T ss_pred EEChhhHHHH
Confidence 8887666554
No 189
>PRK13391 acyl-CoA synthetase; Provisional
Probab=63.12 E-value=54 Score=32.16 Aligned_cols=98 Identities=15% Similarity=0.067 Sum_probs=70.6
Q ss_pred CCCCeEEEecCCCCCCCCceeeechHHHHHHHhhhhcCCCCCccCCCCcEEEEccchHHHHhhHHHHHHHHHcCcEEEEc
Q 014952 180 NPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIM 259 (415)
Q Consensus 180 ~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~l~~l~~G~~~v~~ 259 (415)
.++.++.+...++ ..+|...+...+..+...+. ..++.+++++..+.+-...+-. .+++++..|+..+..
T Consensus 10 ~p~~~a~~~~~~~-------~~~ty~~l~~~~~~la~~L~-~~g~~~~~~V~v~~~~~~~~~~--~~~a~~~~G~~~~~l 79 (511)
T PRK13391 10 TPDKPAVIMASTG-------EVVTYRELDERSNRLAHLFR-SLGLKRGDHVAIFMENNLRYLE--VCWAAERSGLYYTCV 79 (511)
T ss_pred CCCceEEEecCCC-------CEeeHHHHHHHHHHHHHHHH-HcCCCCCCEEEEECCCCHHHHH--HHHHHHHhccEEecc
Confidence 4566776654332 24788888776666665443 3467788998888776654333 478999999999988
Q ss_pred CC-CCHHHHHHHHHhcCceeeecchHHHH
Q 014952 260 QK-FDIVKLMELVQKYKVTVAPFVPPIVL 287 (415)
Q Consensus 260 ~~-~~~~~~~~~l~~~~~t~l~~~p~~l~ 287 (415)
+. .+...+...+++.++..+...+....
T Consensus 80 ~~~~~~~~l~~~l~~~~~~~li~~~~~~~ 108 (511)
T PRK13391 80 NSHLTPAEAAYIVDDSGARALITSAAKLD 108 (511)
T ss_pred ccccCHHHHHHHHhccCCcEEEEchhhHH
Confidence 64 67888999999999999988776543
No 190
>KOG1176 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=62.96 E-value=25 Score=34.86 Aligned_cols=92 Identities=14% Similarity=0.096 Sum_probs=73.6
Q ss_pred eeeechHHHHHHHhhhhcCCCC-CccCCCCcEEEEccchHHHHhhHHHHHHHHHcCcEEEEcCC-CCHHHHHHHHHhcCc
Q 014952 199 GVMLTHKGLVTSVAQQVDGENP-NLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIMQK-FDIVKLMELVQKYKV 276 (415)
Q Consensus 199 ~v~~t~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~pl~~~~g~~~~~l~~l~~G~~~v~~~~-~~~~~~~~~l~~~~~ 276 (415)
+..+|++.+...+......+.. .++.+++|++....|-+.-+... .++++..|+.+.-..+ ++...+...++.-++
T Consensus 43 g~~~T~~e~~~~~~r~A~~L~~~~~~i~~gDvV~i~~pNs~~~~~~--~la~~~~Ga~~~~~Np~~~~~ei~~~~~~s~~ 120 (537)
T KOG1176|consen 43 GRELTYSELHDRCRRLASALSELGLGIKKGDVVGILAPNTPEFVEL--ALAVPMAGAVLNPLNPRLTASEIAKQLKDSKP 120 (537)
T ss_pred CcEEcHHHHHHHHHHHHHHHHhcCCCCCCCCEEEEEcCCCHHHHHH--HHHHHHcCccccccCcccCHHHHHHHHHhcCC
Confidence 7889999998877777665431 12368899999999987766554 7889999999888764 799999999999999
Q ss_pred eeeecchHHHHHHHcC
Q 014952 277 TVAPFVPPIVLAVAKS 292 (415)
Q Consensus 277 t~l~~~p~~l~~l~~~ 292 (415)
.+++.....+..+.+.
T Consensus 121 kiif~d~~~~~~i~~~ 136 (537)
T KOG1176|consen 121 KLIFVDEDFYDKISEA 136 (537)
T ss_pred eEEEEcCchHHHHHHH
Confidence 9999988877776443
No 191
>PLN02861 long-chain-fatty-acid-CoA ligase
Probab=62.92 E-value=38 Score=34.74 Aligned_cols=88 Identities=9% Similarity=-0.013 Sum_probs=67.2
Q ss_pred eeechHHHHHHHhhhhcCCCCCccCCCCcEEEEccchHHHHhhHHHHHHHHHcCcEEEEcCC-CCHHHHHHHHHhcCcee
Q 014952 200 VMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIMQK-FDIVKLMELVQKYKVTV 278 (415)
Q Consensus 200 v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~l~~l~~G~~~v~~~~-~~~~~~~~~l~~~~~t~ 278 (415)
..+|...+...+..+...+. ..++.++|++...++-..-+- ...++++..|+..+.+++ ...+.+...+++.++.+
T Consensus 76 ~~~Ty~el~~~v~~lA~~L~-~~Gv~~gd~Vai~~~n~~e~~--~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~~~ 152 (660)
T PLN02861 76 VWLTYKEVYDAAIRIGSAIR-SRGVNPGDRCGIYGSNCPEWI--IAMEACNSQGITYVPLYDTLGANAVEFIINHAEVSI 152 (660)
T ss_pred eEEEHHHHHHHHHHHHHHHH-HcCCCCCCEEEEEcCCCHHHH--HHHHHHHHcCCeEEEecCCCCHHHHHHHHHcCCCCE
Confidence 45788888877766666443 456889999998888655433 357899999999888764 68889999999999999
Q ss_pred eecchHHHHHHH
Q 014952 279 APFVPPIVLAVA 290 (415)
Q Consensus 279 l~~~p~~l~~l~ 290 (415)
+++....+..+.
T Consensus 153 v~~~~~~~~~~~ 164 (660)
T PLN02861 153 AFVQESKISSIL 164 (660)
T ss_pred EEECHHHHHHHH
Confidence 998766655443
No 192
>TIGR01733 AA-adenyl-dom amino acid adenylation domain. This domain is a subset of the AMP-binding domain found in Pfam (pfam00501) which also hits substrate--CoA ligases and luciferases. Sequences scoring in between trusted and noise for this model may be ambiguous as to whether they activate amino acids or other molecules lacking an alpha amino group.
Probab=62.49 E-value=23 Score=33.39 Aligned_cols=66 Identities=12% Similarity=0.105 Sum_probs=52.3
Q ss_pred ccCCCCcEEEEccchHHHHhhHHHHHHHHHcCcEEEEcCC-CCHHHHHHHHHhcCceeeecchHHHHHH
Q 014952 222 LYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIMQK-FDIVKLMELVQKYKVTVAPFVPPIVLAV 289 (415)
Q Consensus 222 ~~~~~~~~~~~~~pl~~~~g~~~~~l~~l~~G~~~v~~~~-~~~~~~~~~l~~~~~t~l~~~p~~l~~l 289 (415)
.+.+++|++....|-...+- ..+++++..|+.++..++ .....+...+++.+++.+...+.....+
T Consensus 20 ~g~~~gd~v~l~~~n~~~~~--~~~~a~~~~G~~~v~~~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~ 86 (408)
T TIGR01733 20 GGVGPGDRVAVLLERSAELV--VAILAVLKAGAAYVPLDPAYPAERLAFILEDAGARLLLTDSALASRL 86 (408)
T ss_pred hCCCCCCEEEEEeCCCHHHH--HHHHHHHHhCCEEEEcCCCCCHHHHHHHHHhcCCCEEEEcCchhhhc
Confidence 35788999999888775433 357899999999998864 6778899999999999999887765544
No 193
>PRK07059 Long-chain-fatty-acid--CoA ligase; Validated
Probab=61.78 E-value=47 Score=33.07 Aligned_cols=96 Identities=13% Similarity=0.099 Sum_probs=69.9
Q ss_pred CCCCeEEEecCCCCCCCCceeeechHHHHHHHhhhhcCCCCCccCCCCcEEEEccchHHHHhhHHHHHHHHHcCcEEEEc
Q 014952 180 NPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIM 259 (415)
Q Consensus 180 ~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~l~~l~~G~~~v~~ 259 (415)
.++.++++.. ...+|...+...+..+...+. ..++.+++++..+++-..-.-. .+++++..|+..+.+
T Consensus 36 ~p~~~a~~~~---------~~~lTy~~l~~~~~~~a~~L~-~~gi~~gd~V~i~~~n~~~~~~--~~la~~~~G~~~v~v 103 (557)
T PRK07059 36 YADRPAFICM---------GKAITYGELDELSRALAAWLQ-SRGLAKGARVAIMMPNVLQYPV--AIAAVLRAGYVVVNV 103 (557)
T ss_pred cCCCceEEEc---------CceeeHHHHHHHHHHHHHHHH-HhCCCCCCEEEEECCCCHHHHH--HHHHHHhcCeEEecc
Confidence 3566666542 246799999877766666443 3467889999888776554333 478999999999987
Q ss_pred CC-CCHHHHHHHHHhcCceeeecchHHHH
Q 014952 260 QK-FDIVKLMELVQKYKVTVAPFVPPIVL 287 (415)
Q Consensus 260 ~~-~~~~~~~~~l~~~~~t~l~~~p~~l~ 287 (415)
++ .....+...+++.+++.++....+..
T Consensus 104 ~~~~~~~~~~~~~~~~~~~~vi~~~~~~~ 132 (557)
T PRK07059 104 NPLYTPRELEHQLKDSGAEAIVVLENFAT 132 (557)
T ss_pred CcccCHHHHHHHHHccCceEEEEchhhHH
Confidence 64 57888999999999999987765543
No 194
>PLN02479 acetate-CoA ligase
Probab=61.48 E-value=58 Score=32.54 Aligned_cols=95 Identities=11% Similarity=0.086 Sum_probs=70.0
Q ss_pred CCCCeEEEecCCCCCCCCceeeechHHHHHHHhhhhcCCCCCccCCCCcEEEEccchHHHHhhHHHHHHHHHcCcEEEEc
Q 014952 180 NPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIM 259 (415)
Q Consensus 180 ~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~l~~l~~G~~~v~~ 259 (415)
.++.++++. +. ..+|...+...+..+...+. ..+..+++++..+.+-.-.+- ..+++++..|+..+.+
T Consensus 33 ~p~~~a~~~---~~------~~~ty~eL~~~~~~lA~~L~-~~g~~~gd~V~i~~~n~~~~~--~~~la~~~~G~v~v~l 100 (567)
T PLN02479 33 HPTRKSVVH---GS------VRYTWAQTYQRCRRLASALA-KRSIGPGSTVAVIAPNIPAMY--EAHFGVPMAGAVVNCV 100 (567)
T ss_pred CCCceEEEE---CC------ceeeHHHHHHHHHHHHHHHH-HcCCCCCCEEEEECCCcHHHH--HHHHHHHhCCcEEEEe
Confidence 456666654 11 25788888877776666443 446889999998888654333 3578999999999888
Q ss_pred CC-CCHHHHHHHHHhcCceeeecchHHH
Q 014952 260 QK-FDIVKLMELVQKYKVTVAPFVPPIV 286 (415)
Q Consensus 260 ~~-~~~~~~~~~l~~~~~t~l~~~p~~l 286 (415)
+. ...+.+...+++.++..++.....+
T Consensus 101 ~~~~~~~~l~~~l~~~~~~~ii~~~~~~ 128 (567)
T PLN02479 101 NIRLNAPTIAFLLEHSKSEVVMVDQEFF 128 (567)
T ss_pred ccccCHHHHHHHHhhcCceEEEEchhhh
Confidence 65 6778899999999999999877654
No 195
>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase. Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.
Probab=61.37 E-value=37 Score=38.30 Aligned_cols=101 Identities=12% Similarity=0.044 Sum_probs=69.9
Q ss_pred CCCCCeEEEecCCCCCCCCceeeechHHHHHHHhhhhcCCCCCccCCCCcEEEEccchHHHHhhHHHHHHHHHcCcEEEE
Q 014952 179 INPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILI 258 (415)
Q Consensus 179 ~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~l~~l~~G~~~v~ 258 (415)
..++.+|++...+...+......+|.+.+...+..+...+. ..+..+++++..+++-+..+-. .+++++..|+..+.
T Consensus 248 ~~pd~~A~~~~~~~~~~~~~~~~lTY~eL~~~~~~lA~~L~-~~gv~~g~~V~i~~~~~~~~i~--~~lA~l~~G~~~vp 324 (1389)
T TIGR03443 248 KHPDRTCVVETPSFLDPSSKTRSFTYKQINEASNILAHYLL-KTGIKRGDVVMIYAYRGVDLVV--AVMGVLKAGATFSV 324 (1389)
T ss_pred hCCCCeEEEeccccccccCCCceeeHHHHHHHHHHHHHHHH-HhCCCCCCEEEEEecCCHHHHH--HHHHHHhhCcEEec
Confidence 45677887654322111122446899998877766665443 3467889999988877654433 58899999999998
Q ss_pred cCC-CCHHHHHHHHHhcCceeeecc
Q 014952 259 MQK-FDIVKLMELVQKYKVTVAPFV 282 (415)
Q Consensus 259 ~~~-~~~~~~~~~l~~~~~t~l~~~ 282 (415)
+++ ..++++...++..++..++..
T Consensus 325 ldp~~p~~~~~~~l~~~~~~~li~~ 349 (1389)
T TIGR03443 325 IDPAYPPARQTIYLSVAKPRALIVI 349 (1389)
T ss_pred cCCCCcHHHHHHHHHhcCCCEEEEe
Confidence 875 567778888888888877654
No 196
>PRK06087 short chain acyl-CoA synthetase; Reviewed
Probab=61.28 E-value=42 Score=33.28 Aligned_cols=92 Identities=16% Similarity=0.190 Sum_probs=66.5
Q ss_pred CCCCeEEEecCCCCCCCCceeeechHHHHHHHhhhhcCCCCCccCCCCcEEEEccchHHHHhhHHHHHHHHHcCcEEEEc
Q 014952 180 NPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIM 259 (415)
Q Consensus 180 ~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~l~~l~~G~~~v~~ 259 (415)
.++.++++.. +| ..+|...+...+......+. ..++.+++++...+|-.-.+ ...+++++..|+.++..
T Consensus 36 ~pd~~a~~~~----~~----~~~Ty~~l~~~v~~la~~l~-~~G~~~gd~V~i~~~n~~~~--~~~~lA~~~~G~~~v~l 104 (547)
T PRK06087 36 MPDKIAVVDN----HG----ASYTYSALDHAASRLANWLL-AKGIEPGDRVAFQLPGWCEF--TIIYLACLKVGAVSVPL 104 (547)
T ss_pred CCCceEEEcC----CC----CEEEHHHHHHHHHHHHHHHH-HcCCCCCCEEEEECCCCHHH--HHHHHHHHHcCcEEecc
Confidence 4566666531 12 35788888877766666443 35678999999888765533 33588999999998887
Q ss_pred CC-CCHHHHHHHHHhcCceeeecc
Q 014952 260 QK-FDIVKLMELVQKYKVTVAPFV 282 (415)
Q Consensus 260 ~~-~~~~~~~~~l~~~~~t~l~~~ 282 (415)
++ ...+.+...++..++.+++..
T Consensus 105 ~~~~~~~~l~~~l~~~~~~~l~~~ 128 (547)
T PRK06087 105 LPSWREAELVWVLNKCQAKMFFAP 128 (547)
T ss_pred chhcCHHHHHHHHHhcCCeEEEEe
Confidence 64 677888899999999888764
No 197
>PRK05605 long-chain-fatty-acid--CoA ligase; Validated
Probab=61.15 E-value=31 Score=34.47 Aligned_cols=98 Identities=19% Similarity=0.153 Sum_probs=71.4
Q ss_pred CCCCeEEEecCCCCCCCCceeeechHHHHHHHhhhhcCCCCCccCCCCcEEEEccchHHHHhhHHHHHHHHHcCcEEEEc
Q 014952 180 NPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIM 259 (415)
Q Consensus 180 ~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~l~~l~~G~~~v~~ 259 (415)
.++.+|++.. + -.+|...+...+......+. ..++++++++..+.|-....- ..+++++..|+..+..
T Consensus 45 ~p~~~a~~~~--~-------~~~Ty~ql~~~~~~~A~~L~-~~gi~~gd~V~l~~~n~~~~~--~~~lA~~~~G~~~v~l 112 (573)
T PRK05605 45 FGDRPALDFF--G-------ATTTYAELGKQVRRAAAGLR-ALGVRPGDRVAIVLPNCPQHI--VAFYAVLRLGAVVVEH 112 (573)
T ss_pred CCCCeEEEeC--C-------CcccHHHHHHHHHHHHHHHH-HhCCCCCCEEEEECCCCHHHH--HHHHHHHhcCcEEeec
Confidence 4566766542 1 24788888777766665443 346788999998887765433 3588999999999887
Q ss_pred CC-CCHHHHHHHHHhcCceeeecchHHHHHH
Q 014952 260 QK-FDIVKLMELVQKYKVTVAPFVPPIVLAV 289 (415)
Q Consensus 260 ~~-~~~~~~~~~l~~~~~t~l~~~p~~l~~l 289 (415)
++ ...+.+...+.+.++.+++.....+..+
T Consensus 113 ~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~ 143 (573)
T PRK05605 113 NPLYTAHELEHPFEDHGARVAIVWDKVAPTV 143 (573)
T ss_pred CcCCCHHHHHHHHhccCCcEEEechhhHHHH
Confidence 64 7889999999999999998877655443
No 198
>PRK03640 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=61.03 E-value=64 Score=31.27 Aligned_cols=95 Identities=14% Similarity=0.047 Sum_probs=68.8
Q ss_pred CCCCeEEEecCCCCCCCCceeeechHHHHHHHhhhhcCCCCCccCCCCcEEEEccchHHHHhhHHHHHHHHHcCcEEEEc
Q 014952 180 NPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIM 259 (415)
Q Consensus 180 ~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~l~~l~~G~~~v~~ 259 (415)
.|+.+|++.. .-.+|...+...+......+. ..++.+++++..+.|-...+ ...+++++..|+..+.+
T Consensus 15 ~p~~~a~~~~---------~~~~Ty~el~~~~~~~a~~L~-~~g~~~~~~v~i~~~~~~~~--~~~~la~~~~G~~~v~i 82 (483)
T PRK03640 15 TPDRTAIEFE---------EKKVTFMELHEAVVSVAGKLA-ALGVKKGDRVALLMKNGMEM--ILVIHALQQLGAVAVLL 82 (483)
T ss_pred CCCceEEEeC---------CeeeeHHHHHHHHHHHHHHHH-HcCCCCCCEEEEECCCCHHH--HHHHHHHHhCCcEEEec
Confidence 4567776532 145788888776666655443 34577899998888776653 33589999999999988
Q ss_pred CC-CCHHHHHHHHHhcCceeeecchHHH
Q 014952 260 QK-FDIVKLMELVQKYKVTVAPFVPPIV 286 (415)
Q Consensus 260 ~~-~~~~~~~~~l~~~~~t~l~~~p~~l 286 (415)
+. .....+...+++.++..+.......
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~vi~~~~~~ 110 (483)
T PRK03640 83 NTRLSREELLWQLDDAEVKCLITDDDFE 110 (483)
T ss_pred CcCCCHHHHHHHHHhCCCCEEEEcchhh
Confidence 75 6788899999999998887665443
No 199
>PLN02860 o-succinylbenzoate-CoA ligase
Probab=61.02 E-value=1e+02 Score=30.83 Aligned_cols=99 Identities=15% Similarity=0.125 Sum_probs=68.2
Q ss_pred CCCCcEEEeCCCC-------CeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCc-hhHHHHHHHHHHhCCeEeecCC
Q 014952 38 FADRPCIINGPTG-------DVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNC-PQFVFAFLGASYIGATSTTANP 109 (415)
Q Consensus 38 ~p~~~a~~~~~~~-------~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~-~~~~~~~lA~~~~G~~~v~l~~ 109 (415)
.++.++++...+| ..+|+..+...+..... ..++.++|++....+-. ...+...++.+..|+..+.. +
T Consensus 170 ~~~~~a~i~~TSGTTG~PKgV~~s~~~~~~~~~~~~~---~~~~~~~d~~l~~~pl~h~~g~~~~~~~l~~G~~~v~~-~ 245 (563)
T PLN02860 170 APDDAVLICFTSGTTGRPKGVTISHSALIVQSLAKIA---IVGYGEDDVYLHTAPLCHIGGLSSALAMLMVGACHVLL-P 245 (563)
T ss_pred CCCCeEEEEecCCCCCCCceEEeehHHHHHHHHHHHh---hcCCCCCCEEEEecCchhhccHHHHHHHHHcCceEEec-C
Confidence 4567777644333 36788887655444332 34788899888777733 22334567778888887765 4
Q ss_pred CCCHHHHHHHHHhcCceEEEEcccchHHHHh
Q 014952 110 FYTPPEIAKQAIASKAKIIITQAVYNDKVRD 140 (415)
Q Consensus 110 ~~~~~~~~~~l~~~~~~~vl~~~~~~~~~~~ 140 (415)
......+...+++.++.++.........+..
T Consensus 246 ~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~ 276 (563)
T PLN02860 246 KFDAKAALQAIKQHNVTSMITVPAMMADLIS 276 (563)
T ss_pred CCCHHHHHHHHHHhCCeeEEeChHHHHHHHH
Confidence 5678889999999999999998877665543
No 200
>PRK07514 malonyl-CoA synthase; Validated
Probab=60.81 E-value=36 Score=33.24 Aligned_cols=87 Identities=16% Similarity=0.132 Sum_probs=64.7
Q ss_pred eeeechHHHHHHHhhhhcCCCCCccCCCCcEEEEccchHHHHhhHHHHHHHHHcCcEEEEcCC-CCHHHHHHHHHhcCce
Q 014952 199 GVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIMQK-FDIVKLMELVQKYKVT 277 (415)
Q Consensus 199 ~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~l~~l~~G~~~v~~~~-~~~~~~~~~l~~~~~t 277 (415)
+..+|...+...+......+. ..+..+++++....+-... +...+++++..|+..+..++ .....+...++..++.
T Consensus 26 ~~~~Ty~eL~~~~~~la~~L~-~~g~~~gd~v~i~~~~~~e--~~v~~la~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~ 102 (504)
T PRK07514 26 GLRYTYGDLDAASARLANLLV-ALGVKPGDRVAVQVEKSPE--ALALYLATLRAGAVFLPLNTAYTLAELDYFIGDAEPA 102 (504)
T ss_pred CCEEcHHHHHHHHHHHHHHHH-HcCCCCCCEEEEECCCCHH--HHHHHHHHHHcCcEEEECCCCCCHHHHHHHHHhCCCc
Confidence 346788888776666555443 3467889999888876643 33357899999999988764 6788899999999999
Q ss_pred eeecchHHHHH
Q 014952 278 VAPFVPPIVLA 288 (415)
Q Consensus 278 ~l~~~p~~l~~ 288 (415)
.+...+.....
T Consensus 103 ~ii~~~~~~~~ 113 (504)
T PRK07514 103 LVVCDPANFAW 113 (504)
T ss_pred EEEEccchhHH
Confidence 99887665543
No 201
>PRK07470 acyl-CoA synthetase; Validated
Probab=60.44 E-value=56 Score=32.21 Aligned_cols=84 Identities=13% Similarity=0.014 Sum_probs=62.7
Q ss_pred eeechHHHHHHHhhhhcCCCCCccCCCCcEEEEccchHHHHhhHHHHHHHHHcCcEEEEcCC-CCHHHHHHHHHhcCcee
Q 014952 200 VMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIMQK-FDIVKLMELVQKYKVTV 278 (415)
Q Consensus 200 v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~l~~l~~G~~~v~~~~-~~~~~~~~~l~~~~~t~ 278 (415)
..+|.+.+...+......+. ..++.+++++....+-... +...+++++..|+..+..+. .....+...+++.+++.
T Consensus 31 ~~~Ty~el~~~~~~~a~~L~-~~g~~~g~~v~i~~~~~~~--~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~~~~~~~~~ 107 (528)
T PRK07470 31 RSWTWREIDARVDALAAALA-ARGVRKGDRILVHSRNCNQ--MFESMFAAFRLGAVWVPTNFRQTPDEVAYLAEASGARA 107 (528)
T ss_pred ccccHHHHHHHHHHHHHHHH-HhCCCCCCEEEEEcCCCHH--HHHHHHHHHhCCeEEEecCccCCHHHHHHHHHhcCceE
Confidence 35788888776666555443 3467888998888766553 33357899999999888864 67888999999999999
Q ss_pred eecchHHH
Q 014952 279 APFVPPIV 286 (415)
Q Consensus 279 l~~~p~~l 286 (415)
++....+.
T Consensus 108 ~i~~~~~~ 115 (528)
T PRK07470 108 MICHADFP 115 (528)
T ss_pred EEEcchhH
Confidence 98876544
No 202
>PRK06188 acyl-CoA synthetase; Validated
Probab=59.75 E-value=1.3e+02 Score=29.59 Aligned_cols=97 Identities=9% Similarity=-0.004 Sum_probs=68.3
Q ss_pred CCcEEEeCCCC-------CeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHHhCCeEeecCCCCC
Q 014952 40 DRPCIINGPTG-------DVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGATSTTANPFYT 112 (415)
Q Consensus 40 ~~~a~~~~~~~-------~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~ 112 (415)
+.++++...++ ..+|+..+...+.... ...+++.+|++....+-.-.+....++.+..|+..+..+. ..
T Consensus 168 ~~~a~i~~TSGtTG~pk~v~~s~~~l~~~~~~~~---~~~~~~~~~~~l~~~pl~~~~g~~~~~~l~~G~~~~~~~~-~~ 243 (524)
T PRK06188 168 PDIAGLAYTGGTTGKPKGVMGTHRSIATMAQIQL---AEWEWPADPRFLMCTPLSHAGGAFFLPTLLRGGTVIVLAK-FD 243 (524)
T ss_pred CCeEEEEeCCCCCCCCceeeeehHHHHHHHHHHH---hhcCCCcCcEEEEecCchhhhhHHHHHHHHcCCEEEEcCC-CC
Confidence 44666544333 3578887776554433 3357788999988888665555567777888988887764 56
Q ss_pred HHHHHHHHHhcCceEEEEcccchHHHHh
Q 014952 113 PPEIAKQAIASKAKIIITQAVYNDKVRD 140 (415)
Q Consensus 113 ~~~~~~~l~~~~~~~vl~~~~~~~~~~~ 140 (415)
.+.+...+++.++.+++........+..
T Consensus 244 ~~~~~~~i~~~~~t~~~~~P~~l~~l~~ 271 (524)
T PRK06188 244 PAEVLRAIEEQRITATFLVPTMIYALLD 271 (524)
T ss_pred HHHHHHHHHHhCCEEEEehHHHHHHHHh
Confidence 7889999999999999987776554433
No 203
>PF03321 GH3: GH3 auxin-responsive promoter; InterPro: IPR004993 Transcription of the gene family, GH3, has been shown to be specifically induced by the plant hormone auxin. The auxin-responsive GH3 gene promoter is composed of multiple auxin response elements (AuxREs), and each AuxRE contributes incrementally to the strong auxin inducibility to the promoter.; PDB: 4EPL_A 4EQ4_B 4EWV_B 4EQL_B 4EPM_A.
Probab=59.65 E-value=3.8 Score=40.54 Aligned_cols=86 Identities=13% Similarity=0.162 Sum_probs=45.2
Q ss_pred cccceeeeecCCCCCHHHHHHHHhhCCCCcc-ccccccccCCccccccccccCCccccCCCcccccccCC-eEEEEeCCC
Q 014952 300 MSSIRTVMSGAAPMGKELEDAVRAKLPHAKL-GQGYGMTEAGPVLSMCLAFAKEPFEIKSGACGTVVRNA-EMKIVDPDT 377 (415)
Q Consensus 300 l~~lr~v~~gG~~l~~~~~~~~~~~~~~~~~-~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~G~p~~~~-~v~i~d~~~ 377 (415)
+|+|+.+.+.+..-.....+++++.+|+..+ ...|++||+- ++++. . .....+.+.++. -.+-++.++
T Consensus 266 WP~L~~v~~~~~g~~~~y~~~l~~~~g~~~~~~~~y~ASEg~--i~i~~-------~-~~~~~~~l~~~~~ffEFip~~~ 335 (528)
T PF03321_consen 266 WPNLKLVSCWGGGSMAPYAPKLREYFGGVPIQSKGYGASEGF--IGIPL-------D-PEDPGYVLAPDSGFFEFIPVDE 335 (528)
T ss_dssp STT--EEEEE-SGGGGGGHHHHHHHHTTS-EEE-EEEETTEE--EEEES---------CCC--EEE-TTSSEEEEEE-ST
T ss_pred CCCCcEEEEEcCCChHHHHHHHHHHcCCCceeeccccccceE--EEEec-------C-CCCCceEeecCCeEEEEEeccC
Confidence 6899977666555566788888888877554 4789999964 33331 0 111122233332 445555432
Q ss_pred --------CC-----CCCCCCceeEEEecCc
Q 014952 378 --------GI-----SLPRNQAGEICIRGAQ 395 (415)
Q Consensus 378 --------~~-----~~~~g~~Gel~v~~~~ 395 (415)
.+ .+..|+.=||+|.+.+
T Consensus 336 ~~~~~~~~~~~l~~~ele~G~~YelviTt~~ 366 (528)
T PF03321_consen 336 DEQNPSEQPKTLLLHELEVGEEYELVITTNS 366 (528)
T ss_dssp T-------SSSEEGGG--TT-EEEEEEESTT
T ss_pred CcccccCCCceecHHHhcCCCeEEEEEeccc
Confidence 21 3568888899998763
No 204
>COG0031 CysK Cysteine synthase [Amino acid transport and metabolism]
Probab=59.38 E-value=1.4e+02 Score=27.10 Aligned_cols=68 Identities=19% Similarity=0.109 Sum_probs=48.6
Q ss_pred HHHHHHHH----cC-CCCCCEEEEEcCCchhHHHHHHHHHHhCCeEeecCCCCCHHHHHHHHHhcCceEEEEcc
Q 014952 64 KVAAGLSK----LG-VQKGDVIMLLLQNCPQFVFAFLGASYIGATSTTANPFYTPPEIAKQAIASKAKIIITQA 132 (415)
Q Consensus 64 ~~a~~L~~----~g-~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~vl~~~ 132 (415)
|.|.++.+ .| +++|++|.=-.. +---+...+.|...|.-.+.+=|.....+.+.+++..++.+++++.
T Consensus 44 R~A~~mI~~Ae~~G~l~pG~tIVE~TS-GNTGI~LA~vaa~~Gy~~iivmP~~~S~er~~~l~a~GAevi~t~~ 116 (300)
T COG0031 44 RIALYMIEDAEKRGLLKPGGTIVEATS-GNTGIALAMVAAAKGYRLIIVMPETMSQERRKLLRALGAEVILTPG 116 (300)
T ss_pred HHHHHHHHHHHHcCCCCCCCEEEEcCC-ChHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHcCCEEEEcCC
Confidence 44444443 35 789995444443 3344555566667888888888877788889999999999999987
No 205
>PRK09088 acyl-CoA synthetase; Validated
Probab=59.06 E-value=60 Score=31.55 Aligned_cols=94 Identities=14% Similarity=0.029 Sum_probs=66.4
Q ss_pred CCCCeEEEecCCCCCCCCceeeechHHHHHHHhhhhcCCCCCccCCCCcEEEEccchHHHHhhHHHHHHHHHcCcEEEEc
Q 014952 180 NPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIM 259 (415)
Q Consensus 180 ~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~l~~l~~G~~~v~~ 259 (415)
.++.++++....| ..+|...+...+......+. ..++.+++++..+.+-...+-. .+++++..|+..+..
T Consensus 8 ~p~~~a~~~~~~~-------~~~ty~~l~~~v~~~a~~l~-~~g~~~~~~v~i~~~~~~~~~~--~~la~~~~G~~~v~~ 77 (488)
T PRK09088 8 QPQRLAAVDLALG-------RRWTYAELDALVGRLAAVLR-RRGCVDGERLAVLARNSVWLVA--LHFACARVGAIYVPL 77 (488)
T ss_pred CCCceEEEecCCC-------cEEEHHHHHHHHHHHHHHHH-HcCCCCCCEEEEECCCCHHHHH--HHHHHHHcCeEEEee
Confidence 3556665432222 35788888776665555333 3457788999888877664333 478999999999887
Q ss_pred CC-CCHHHHHHHHHhcCceeeecch
Q 014952 260 QK-FDIVKLMELVQKYKVTVAPFVP 283 (415)
Q Consensus 260 ~~-~~~~~~~~~l~~~~~t~l~~~p 283 (415)
++ ..++.+...+++.+++.++...
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~ii~~~ 102 (488)
T PRK09088 78 NWRLSASELDALLQDAEPRLLLGDD 102 (488)
T ss_pred CccCCHHHHHHHHHhCCCCEEEEcc
Confidence 64 6778899999999999987654
No 206
>TIGR02262 benz_CoA_lig benzoate-CoA ligase family. Characterized members of this protein family include benzoate-CoA ligase, 4-hydroxybenzoate-CoA ligase, 2-aminobenzoate-CoA ligase, etc. Members are related to fatty acid and acetate CoA ligases.
Probab=58.86 E-value=69 Score=31.38 Aligned_cols=96 Identities=11% Similarity=0.075 Sum_probs=67.1
Q ss_pred CCCCeEEEecCCCCCCCCceeeechHHHHHHHhhhhcCCCCCccCCCCcEEEEccchHHHHhhHHHHHHHHHcCcEEEEc
Q 014952 180 NPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIM 259 (415)
Q Consensus 180 ~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~l~~l~~G~~~v~~ 259 (415)
.++.++++.- .-.+|...+...+......+. ..+..+++++...++-.. .+...+++++..|+..+.+
T Consensus 18 ~p~~~a~~~~---------~~~~ty~~l~~~~~~~a~~L~-~~g~~~g~~v~l~~~~~~--~~~~~~~a~~~~G~~~v~l 85 (508)
T TIGR02262 18 RGGKTAFIDD---------ISSLSYGELEAQVRRLGAALR-RLGVKREERVLLLMLDGV--DFPIAFLGAIRAGIVPVAL 85 (508)
T ss_pred cCCceEEEeC---------CceeeHHHHHHHHHHHHHHHH-HcCCCCCCEEEEECCCCH--HHHHHHHHHHHcCcEEeec
Confidence 4566776531 234677877766655554332 346778888888776554 3333578999999999888
Q ss_pred CC-CCHHHHHHHHHhcCceeeecchHHHH
Q 014952 260 QK-FDIVKLMELVQKYKVTVAPFVPPIVL 287 (415)
Q Consensus 260 ~~-~~~~~~~~~l~~~~~t~l~~~p~~l~ 287 (415)
+. .+...+...+++.++..++.......
T Consensus 86 ~~~~~~~~l~~~~~~~~~~~~i~~~~~~~ 114 (508)
T TIGR02262 86 NTLLTADDYAYMLEDSRARVVFVSGELLP 114 (508)
T ss_pred cCCCCHHHHHHHHHhcCCeEEEEchhhHH
Confidence 64 68889999999999999987765543
No 207
>PRK07638 acyl-CoA synthetase; Validated
Probab=58.70 E-value=1.4e+02 Score=29.07 Aligned_cols=87 Identities=8% Similarity=0.120 Sum_probs=62.5
Q ss_pred CeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCch-hHHHHHHHHHHhCCeEeecCCCCCHHHHHHHHHhcCceEEE
Q 014952 51 DVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCP-QFVFAFLGASYIGATSTTANPFYTPPEIAKQAIASKAKIII 129 (415)
Q Consensus 51 ~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~-~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~vl 129 (415)
..+|.+.+...+...+. ..+++++|++....+-.. .++...+..+..|+..+.. +..+++.+...+++.++.++.
T Consensus 161 v~~s~~~~~~~~~~~~~---~~~~~~~d~~~~~~~l~~~~~l~~~~~~l~~g~~~~~~-~~~~~~~~~~~i~~~~~t~~~ 236 (487)
T PRK07638 161 FLRAQQSWLHSFDCNVH---DFHMKREDSVLIAGTLVHSLFLYGAISTLYVGQTVHLM-RKFIPNQVLDKLETENISVMY 236 (487)
T ss_pred EEEecHHHHHHHHHHHH---hcCcCCCCEEEEeecchHHHHHHHHHHHHccCcEEEEc-CCCCHHHHHHHHHHcCCeEEE
Confidence 46788887666554443 346788998887766433 2345566677889988765 456788899999999999999
Q ss_pred EcccchHHHHhh
Q 014952 130 TQAVYNDKVRDL 141 (415)
Q Consensus 130 ~~~~~~~~~~~~ 141 (415)
........+...
T Consensus 237 ~~P~~~~~l~~~ 248 (487)
T PRK07638 237 TVPTMLESLYKE 248 (487)
T ss_pred eCcHHHHHHHhC
Confidence 988877665543
No 208
>PRK05620 long-chain-fatty-acid--CoA ligase; Validated
Probab=58.68 E-value=66 Score=32.22 Aligned_cols=102 Identities=12% Similarity=0.052 Sum_probs=71.6
Q ss_pred CCCCeEEEecCCCCCCCCceeeechHHHHHHHhhhhcCCCCCccCCCCcEEEEccchHHHHhhHHHHHHHHHcCcEEEEc
Q 014952 180 NPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIM 259 (415)
Q Consensus 180 ~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~l~~l~~G~~~v~~ 259 (415)
.++..+++... .....+|...+...+......+....+..+++++....+-+.-.- ..+++++..|+..+.+
T Consensus 23 ~~~~~a~~~~~------~~~~~~Ty~el~~~~~~la~~L~~~~g~~~gd~V~~~~~n~~e~~--~~~lA~~~~G~~~v~l 94 (576)
T PRK05620 23 HGDTTVTTWGG------AEQEQTTFAAIGARAAALAHALHDELGITGDQRVGSMMYNCAEHL--EVLFAVACMGAVFNPL 94 (576)
T ss_pred CCCceEEEEcC------CceEEEeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEeCCCHHHH--HHHHHHHhcCCEEeec
Confidence 45666655421 123567888887776666664431246778899888887655433 3578899999998888
Q ss_pred CC-CCHHHHHHHHHhcCceeeecchHHHHHH
Q 014952 260 QK-FDIVKLMELVQKYKVTVAPFVPPIVLAV 289 (415)
Q Consensus 260 ~~-~~~~~~~~~l~~~~~t~l~~~p~~l~~l 289 (415)
++ .....+...++..++..++..+.....+
T Consensus 95 ~~~~~~~~l~~~l~~~~~~~~i~~~~~~~~~ 125 (576)
T PRK05620 95 NKQLMNDQIVHIINHAEDEVIVADPRLAEQL 125 (576)
T ss_pred ccccCHHHHHHHHhccCCcEEEEChhhHHHH
Confidence 64 6788999999999999999877665543
No 209
>COG0318 CaiC Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=58.03 E-value=65 Score=32.02 Aligned_cols=95 Identities=20% Similarity=0.199 Sum_probs=70.4
Q ss_pred CCCCeEEEecCCCCCCCCceeeechHHHHHHHhhhhcCCCCCccCCCCcEEEEccchHHHHhhHHHHHHHHHcCcEEEEc
Q 014952 180 NPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIM 259 (415)
Q Consensus 180 ~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~l~~l~~G~~~v~~ 259 (415)
.++..+.+...-+. .+|.+.+...+......+. .....++|++...+|-+.-+- ..+++++..|+..+.+
T Consensus 24 ~~~~~a~~~~~~~~-------~~Ty~el~~~~~~~A~~L~-~~~v~~gdrVail~~N~~e~~--~~~~a~~~~Gav~vpl 93 (534)
T COG0318 24 NPDRPALIFLGRGG-------RLTYRELDRRANRLAAALQ-ALGVKPGDRVAILLPNSPEFL--IAFLAALRAGAVAVPL 93 (534)
T ss_pred CCCceEEEEcCCCc-------eeeHHHHHHHHHHHHHHHH-HcCCCCCCEEEEECCCCHHHH--HHHHHHHhcCEEEeec
Confidence 45666666543222 7899999888777766554 223678999888888765433 3578999999999998
Q ss_pred CC-CCHHHHHHHHHhcCceeeecchH
Q 014952 260 QK-FDIVKLMELVQKYKVTVAPFVPP 284 (415)
Q Consensus 260 ~~-~~~~~~~~~l~~~~~t~l~~~p~ 284 (415)
++ ..+..+...++..++..++....
T Consensus 94 n~~~~~~~l~~~l~~~~~~~~~~~~~ 119 (534)
T COG0318 94 NPRLTPRELAYILNDAGAKVLITSAE 119 (534)
T ss_pred CcccCHHHHHHHHHhcCCeEEEEccc
Confidence 75 47888888899989999888765
No 210
>PRK08308 acyl-CoA synthetase; Validated
Probab=57.94 E-value=1.7e+02 Score=27.71 Aligned_cols=99 Identities=9% Similarity=0.140 Sum_probs=69.1
Q ss_pred CCCCcEEEeCCCC-------CeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCc--hhHHHHHHHHHHhCCeEeecC
Q 014952 38 FADRPCIINGPTG-------DVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNC--PQFVFAFLGASYIGATSTTAN 108 (415)
Q Consensus 38 ~p~~~a~~~~~~~-------~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~--~~~~~~~lA~~~~G~~~v~l~ 108 (415)
.++..+++...++ ..+|++.+...+..+...+ ++..+|++....+-. ..++..++..+..|+..+..+
T Consensus 99 ~~~~~~~i~~TSGtTG~PKgv~~s~~~l~~~~~~~~~~~---~~~~~~~~~~~~p~~h~~g~~~~~~~~l~~G~~~~~~~ 175 (414)
T PRK08308 99 LAEEPSLLQYSSGTTGEPKLIRRSWTEIDREIEAYNEAL---NCEQDETPIVACPVTHSYGLICGVLAALTRGSKPVIIT 175 (414)
T ss_pred CCCCceEEEECCCCCCCCcEEEEehHhHHHHHHHHHHhh---CCCcccEEEEecCcHHHHHHHHHHHHHHHcCCEEEecC
Confidence 4566676644332 4689998877666555443 567888887777654 334556788888999887665
Q ss_pred CCCCHHHHHHHHHhcCceEEEEcccchHHHHh
Q 014952 109 PFYTPPEIAKQAIASKAKIIITQAVYNDKVRD 140 (415)
Q Consensus 109 ~~~~~~~~~~~l~~~~~~~vl~~~~~~~~~~~ 140 (415)
. ...+.+...+++.++.+++........+..
T Consensus 176 ~-~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~ 206 (414)
T PRK08308 176 N-KNPKFALNILRNTPQHILYAVPLMLHILGR 206 (414)
T ss_pred C-CCHHHHHHHHHHhCCeEEEcCHHHHHHHHh
Confidence 4 467788888999999998888776665544
No 211
>PRK02261 methylaspartate mutase subunit S; Provisional
Probab=57.88 E-value=38 Score=26.63 Aligned_cols=47 Identities=4% Similarity=-0.012 Sum_probs=35.6
Q ss_pred HHHHhhHHHHHHHHHcCcEEEEcC-CCCHHHHHHHHHhcCceeeecch
Q 014952 237 FHIYSLNSVLLCALRVGAAILIMQ-KFDIVKLMELVQKYKVTVAPFVP 283 (415)
Q Consensus 237 ~~~~g~~~~~l~~l~~G~~~v~~~-~~~~~~~~~~l~~~~~t~l~~~p 283 (415)
.|..|........-..|..++..- ...++.+.+.+.+++++++....
T Consensus 15 ~H~lG~~iv~~~lr~~G~eVi~LG~~vp~e~i~~~a~~~~~d~V~lS~ 62 (137)
T PRK02261 15 CHAVGNKILDRALTEAGFEVINLGVMTSQEEFIDAAIETDADAILVSS 62 (137)
T ss_pred hhHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEcC
Confidence 677777655555567788887775 46789999999999999876643
No 212
>KOG1179 consensus Very long-chain acyl-CoA synthetase/fatty acid transporter [Lipid transport and metabolism]
Probab=57.24 E-value=54 Score=32.37 Aligned_cols=79 Identities=16% Similarity=0.163 Sum_probs=62.0
Q ss_pred HHHHHHHHHHHHH-cCCCCCCEEEEEcC--CchhHHHHHHHHHHhCCeEeecCCCCCHHHHHHHHHhcCceEEEEcccch
Q 014952 59 ELTSRKVAAGLSK-LGVQKGDVIMLLLQ--NCPQFVFAFLGASYIGATSTTANPFYTPPEIAKQAIASKAKIIITQAVYN 135 (415)
Q Consensus 59 ~~~~~~~a~~L~~-~g~~~g~~V~i~~~--~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~vl~~~~~~ 135 (415)
+.+.-+.|..+.. .|+++.|+|-+.+| .+...++-+-+|+..|+++| |....+...+..--.+.++.++-.-.+..
T Consensus 264 h~r~~~~a~g~~~~~g~~~~DvvY~~lPLYHsaa~ilGi~~~l~~GaT~V-lrkKFSAS~FW~DC~k~~~Tv~QYIGElc 342 (649)
T KOG1179|consen 264 HLRYLQGAAGFYYVFGMTADDVVYTTLPLYHSAAGILGIGGCLLHGATVV-LRKKFSASNFWDDCRKYNVTVIQYIGELC 342 (649)
T ss_pred HHHHHHHHHHHHHHhCCCccceEEEcchhHHHHHHHHHHHHHHhcCceEE-EecccchhhhHHHHHHhCCeeeehHHHHH
Confidence 3455556664333 59999999999999 78889999999999999976 77888999888888889998887655544
Q ss_pred HHH
Q 014952 136 DKV 138 (415)
Q Consensus 136 ~~~ 138 (415)
..+
T Consensus 343 RYL 345 (649)
T KOG1179|consen 343 RYL 345 (649)
T ss_pred HHH
Confidence 443
No 213
>TIGR01139 cysK cysteine synthase A. This model distinguishes cysteine synthase A (CysK) from cysteine synthase B (CysM). CysM differs in having a broader specificity that also allows the use of thiosulfate to produce cysteine thiosulfonate.
Probab=57.21 E-value=99 Score=27.97 Aligned_cols=91 Identities=14% Similarity=-0.004 Sum_probs=57.9
Q ss_pred CcEEEeCCCCCeeeHHHHHHHHHHHHHHHHHcCC-CCCCEEEEEcCCchhHHHHHHHHHHhCCeEeecCCCCCHHHHHHH
Q 014952 41 RPCIINGPTGDVYTYADVELTSRKVAAGLSKLGV-QKGDVIMLLLQNCPQFVFAFLGASYIGATSTTANPFYTPPEIAKQ 119 (415)
Q Consensus 41 ~~a~~~~~~~~~~Ty~el~~~~~~~a~~L~~~g~-~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~ 119 (415)
++.+-.+.-+.+-|+++-... ..+. ...+.|. .+|++| +....+-.-....+++.+.|..+..+-|...++.....
T Consensus 22 ~i~~K~E~~nptGS~K~R~a~-~~l~-~a~~~g~~~~g~~v-v~aSsGN~g~alA~~a~~~Gl~~~i~vp~~~~~~k~~~ 98 (298)
T TIGR01139 22 NVFVKLEGRNPSGSVKDRIAL-NMIW-DAEKRGLLKPGKTI-VEPTSGNTGIALAMVAAARGYKLILTMPETMSIERRKL 98 (298)
T ss_pred eEEEEEcccCCCCcchHHHHH-HHHH-HHHHcCCCCCCCEE-EEeCCChhHHHHHHHHHHcCCeEEEEeCCccCHHHHHH
Confidence 445545433444455442222 2233 3444454 677766 44444445566667778899988888887766777889
Q ss_pred HHhcCceEEEEcccc
Q 014952 120 AIASKAKIIITQAVY 134 (415)
Q Consensus 120 l~~~~~~~vl~~~~~ 134 (415)
++..++++++++...
T Consensus 99 ~~~~GA~v~~~~~~~ 113 (298)
T TIGR01139 99 LKAYGAELVLTPGAE 113 (298)
T ss_pred HHHcCCEEEEECCCC
Confidence 999999999998653
No 214
>PF01297 TroA: Periplasmic solute binding protein family; InterPro: IPR006127 This is a family of ABC transporter metal-binding lipoproteins. An example is the periplasmic zinc-binding protein TroA P96116 from SWISSPROT that interacts with an ATP-binding cassette transport system in Treponema pallidum and plays a role in the transport of zinc across the cytoplasmic membrane. Related proteins are found in both Gram-positive and Gram-negative bacteria. ; GO: 0046872 metal ion binding, 0030001 metal ion transport; PDB: 2PS9_A 2PS0_A 2OSV_A 2OGW_A 2PS3_A 2PRS_B 3MFQ_C 3GI1_B 2OV3_A 1PQ4_A ....
Probab=56.00 E-value=57 Score=28.73 Aligned_cols=98 Identities=19% Similarity=0.269 Sum_probs=56.8
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHHhCCeEeecCCC--CCHH---HHHHHHHhcCceEEEE
Q 014952 56 ADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGATSTTANPF--YTPP---EIAKQAIASKAKIIIT 130 (415)
Q Consensus 56 ~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~--~~~~---~~~~~l~~~~~~~vl~ 130 (415)
.++.++.+++...+.+.--+...+..+...+..+++.-.+++-..+.. -..+. .++. ++...+.+.++++||+
T Consensus 128 ~~~~~~L~~l~~~~~~~~~~~~~~~~v~~h~~~~Y~~~~~gl~~~~~~--~~~~~~~ps~~~l~~l~~~ik~~~v~~i~~ 205 (256)
T PF01297_consen 128 EKYLKELDELDAEIKEKLAKLPGRPVVVYHDAFQYFAKRYGLKVIGVI--EISPGEEPSPKDLAELIKLIKENKVKCIFT 205 (256)
T ss_dssp HHHHHHHHHHHHHHHHHHTTSSGGEEEEEESTTHHHHHHTT-EEEEEE--SSSSSSSS-HHHHHHHHHHHHHTT-SEEEE
T ss_pred HHHHHHHHHHHHHHHHHhhcccCCeEEEEChHHHHHHHhcCCceeeee--ccccccCCCHHHHHHHHHHhhhcCCcEEEe
Confidence 344444444555554421111226778888899999888877765544 12222 2333 5556667889999999
Q ss_pred cccchHH-HHhhhhhcCceEEEeCCC
Q 014952 131 QAVYNDK-VRDLSEHHGARIVTIDPP 155 (415)
Q Consensus 131 ~~~~~~~-~~~~~~~~~~~~i~~~~~ 155 (415)
+...... ...+.+..+.+++.++..
T Consensus 206 e~~~~~~~~~~la~~~g~~vv~ld~l 231 (256)
T PF01297_consen 206 EPQFSSKLAEALAKETGVKVVYLDPL 231 (256)
T ss_dssp ETTS-THHHHHHHHCCT-EEEESSTT
T ss_pred cCCCChHHHHHHHHHcCCcEEEeCCC
Confidence 8765544 455556677888888765
No 215
>TIGR02379 ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase. This family consists of TDP-4-keto-6-deoxy-D-glucose transaminases, the WecE (formerly RffA) protein of enterobacterial common antigen (ECA) biosynthesis, from enterobacteria. It also includes closely matching sequence from species not expected to make ECA, but which contain other genes for the biosynthesis of TDP-4-keto-6-deoxy-D-Glc, an intermediate in the biosynthesis of other compounds as well and the substrate of WecA. This family belongs to the DegT/DnrJ/EryC1/StrS aminotransferase family (pfam01041).
Probab=55.99 E-value=1.2e+02 Score=28.69 Aligned_cols=58 Identities=19% Similarity=0.149 Sum_probs=35.4
Q ss_pred HHHcCCCCCCEEEEEcCCchhHHHHHHHHHHhCCeEeecCCC-----CCHHHHHHHHHhcCceEEEE
Q 014952 69 LSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGATSTTANPF-----YTPPEIAKQAIASKAKIIIT 130 (415)
Q Consensus 69 L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~-----~~~~~~~~~l~~~~~~~vl~ 130 (415)
++..++++||.|.+-.. .+.....++...|+.++.++.+ .+.+.+...+.. +.++|+.
T Consensus 63 l~al~~~pGd~Viv~~~---t~~~~~~~~~~~G~~~v~vd~d~~~~~~d~~~le~~i~~-~tk~Iip 125 (376)
T TIGR02379 63 ALLLDIQPGDEVIMPSY---TFVSTANAFVLRGAKIVFVDIRPDTMNIDETLIESAITH-RTKAIVP 125 (376)
T ss_pred HHHcCCCCcCEEEECCC---CcHHHHHHHHHcCCEEEEEecCCCcCCCCHHHHHHhcCc-CceEEEE
Confidence 34457889998776443 4445556667889888877643 234556655542 4555553
No 216
>PRK06164 acyl-CoA synthetase; Validated
Probab=55.86 E-value=1.4e+02 Score=29.56 Aligned_cols=98 Identities=17% Similarity=0.198 Sum_probs=69.8
Q ss_pred CCCcEEEeCCCC-------CeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCc-hhHHHHHHHHHHhCCeEeecCCC
Q 014952 39 ADRPCIINGPTG-------DVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNC-PQFVFAFLGASYIGATSTTANPF 110 (415)
Q Consensus 39 p~~~a~~~~~~~-------~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~-~~~~~~~lA~~~~G~~~v~l~~~ 110 (415)
++.++++...+| ..+|...+...+..++..+ ++.+++++...+|-+ .-.+..+++.+..|+..+..+ .
T Consensus 180 ~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~---~~~~~~~~l~~~p~~~~~g~~~~~~~l~~G~~~~~~~-~ 255 (540)
T PRK06164 180 PDAGALLFTTSGTTSGPKLVLHRQATLLRHARAIARAY---GYDPGAVLLAALPFCGVFGFSTLLGALAGGAPLVCEP-V 255 (540)
T ss_pred CCceEEEEECCCCCCCCcEEEEehHHHHHHHHHHHHhc---CCCCCCEEEEcCCchhHHHHHHHHHHHhcCceEEecC-C
Confidence 466777654333 3678888877666655555 677899988888743 333455778888888877654 5
Q ss_pred CCHHHHHHHHHhcCceEEEEcccchHHHHh
Q 014952 111 YTPPEIAKQAIASKAKIIITQAVYNDKVRD 140 (415)
Q Consensus 111 ~~~~~~~~~l~~~~~~~vl~~~~~~~~~~~ 140 (415)
.....+...+++.++.+++........+..
T Consensus 256 ~~~~~~~~~l~~~~~t~~~~~p~~l~~l~~ 285 (540)
T PRK06164 256 FDAARTARALRRHRVTHTFGNDEMLRRILD 285 (540)
T ss_pred CCHHHHHHHHHHhCCeeecCCHHHHHHHHH
Confidence 677888999999999999988776655443
No 217
>PRK08162 acyl-CoA synthetase; Validated
Probab=55.82 E-value=38 Score=33.61 Aligned_cols=85 Identities=9% Similarity=0.057 Sum_probs=65.2
Q ss_pred eechHHHHHHHhhhhcCCCCCccCCCCcEEEEccchHHHHhhHHHHHHHHHcCcEEEEcCC-CCHHHHHHHHHhcCceee
Q 014952 201 MLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIMQK-FDIVKLMELVQKYKVTVA 279 (415)
Q Consensus 201 ~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~l~~l~~G~~~v~~~~-~~~~~~~~~l~~~~~t~l 279 (415)
.+|...+...+......+. ..+..+++++....|-...+- ..+++++..|+..+..++ .....+...+++.+++.+
T Consensus 43 ~~ty~~L~~~~~~~a~~L~-~~g~~~g~~v~i~~~~~~~~~--~~~lA~~~~G~~~vpl~~~~~~~~~~~~l~~~~~~~i 119 (545)
T PRK08162 43 RRTWAETYARCRRLASALA-RRGIGRGDTVAVLLPNIPAMV--EAHFGVPMAGAVLNTLNTRLDAASIAFMLRHGEAKVL 119 (545)
T ss_pred EEEHHHHHHHHHHHHHHHH-HhCCCCCCEEEEECCCchHHH--HHHHHHHHhCcEEeccccccChHHHHHHHHhCCCeEE
Confidence 5788888877666665443 346788999988887765433 357899999999888864 678899999999999999
Q ss_pred ecchHHHHH
Q 014952 280 PFVPPIVLA 288 (415)
Q Consensus 280 ~~~p~~l~~ 288 (415)
+..+.....
T Consensus 120 ~~~~~~~~~ 128 (545)
T PRK08162 120 IVDTEFAEV 128 (545)
T ss_pred EEccchhhH
Confidence 887765543
No 218
>TIGR01136 cysKM cysteine synthases. This model discriminates cysteine synthases (EC 2.5.1.47) (both CysK and CysM) from cystathionine beta-synthase, a protein found primarily in eukaryotes and carrying a C-terminal CBS domain lacking from this protein. Bacterial proteins lacking the CBS domain but otherwise showing resemblamnce to cystathionine beta-synthases and considerable phylogenetic distance from known cysteine synthases were excluded from the seed and score below the trusted cutoff.
Probab=55.73 E-value=1.6e+02 Score=26.72 Aligned_cols=90 Identities=19% Similarity=0.052 Sum_probs=58.6
Q ss_pred CcEEEeCCCCCeeeHHHHHHHHHHHHHHHHHcCC-CCCCEEEEEcCCchhHHHHHHHHHHhCCeEeecCCCCCHHHHHHH
Q 014952 41 RPCIINGPTGDVYTYADVELTSRKVAAGLSKLGV-QKGDVIMLLLQNCPQFVFAFLGASYIGATSTTANPFYTPPEIAKQ 119 (415)
Q Consensus 41 ~~a~~~~~~~~~~Ty~el~~~~~~~a~~L~~~g~-~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~ 119 (415)
++.+-.+..+.+-||+. +.+..+...+.+.|. .+|+.|. ....+-.-....+++.+.|..+..+-|...++.....
T Consensus 23 ~i~~K~E~~~ptGS~K~--R~a~~~~~~a~~~g~~~~g~~vv-~aSsGN~g~alA~~a~~~G~~~~i~vp~~~~~~k~~~ 99 (299)
T TIGR01136 23 RVLAKLEGRNPSGSVKD--RIALSMIEDAEKRGLLKPGDTII-EATSGNTGIALAMVAAAKGYKLILTMPETMSLERRKL 99 (299)
T ss_pred eEEEEEcccCCCCCccH--HHHHHHHHHHHHcCCCCCCCEEE-EeCCChHHHHHHHHHHHcCCcEEEEECCCCCHHHHHH
Confidence 44454443344456664 222223333444454 6777664 4555556666677888899988888887777777889
Q ss_pred HHhcCceEEEEccc
Q 014952 120 AIASKAKIIITQAV 133 (415)
Q Consensus 120 l~~~~~~~vl~~~~ 133 (415)
++..++++++++..
T Consensus 100 ~~~~GA~v~~~~~~ 113 (299)
T TIGR01136 100 LRAYGAELILTPAE 113 (299)
T ss_pred HHHcCCEEEEeCCC
Confidence 99999999998764
No 219
>PRK08314 long-chain-fatty-acid--CoA ligase; Validated
Probab=55.67 E-value=42 Score=33.24 Aligned_cols=87 Identities=14% Similarity=0.083 Sum_probs=65.0
Q ss_pred eechHHHHHHHhhhhcCCCCCccCCCCcEEEEccchHHHHhhHHHHHHHHHcCcEEEEcCC-CCHHHHHHHHHhcCceee
Q 014952 201 MLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIMQK-FDIVKLMELVQKYKVTVA 279 (415)
Q Consensus 201 ~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~l~~l~~G~~~v~~~~-~~~~~~~~~l~~~~~t~l 279 (415)
.+|...+...+......+...+++.+++++..+.+-.- .+...+++++..|+..+..++ .....+...+++.++..+
T Consensus 35 ~~Ty~~l~~~v~~~a~~L~~~~g~~~g~~V~i~~~~~~--~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i 112 (546)
T PRK08314 35 AISYRELLEEAERLAGYLQQECGVRKGDRVLLYMQNSP--QFVIAYYAILRANAVVVPVNPMNREEELAHYVTDSGARVA 112 (546)
T ss_pred eecHHHHHHHHHHHHHHHHHhhCCCCCCEEEEECCCCh--HHHHHHHHHHHcCcEEeecCcCcCHHHHHHHHHhCCCeEE
Confidence 47888887776666554431226788999988887654 333468899999999998864 678889999999999999
Q ss_pred ecchHHHHHH
Q 014952 280 PFVPPIVLAV 289 (415)
Q Consensus 280 ~~~p~~l~~l 289 (415)
+........+
T Consensus 113 i~~~~~~~~~ 122 (546)
T PRK08314 113 IVGSELAPKV 122 (546)
T ss_pred EEccchhhhH
Confidence 8877655444
No 220
>PRK13390 acyl-CoA synthetase; Provisional
Probab=55.40 E-value=68 Score=31.35 Aligned_cols=94 Identities=19% Similarity=0.101 Sum_probs=66.8
Q ss_pred CCCCeEEEecCCCCCCCCceeeechHHHHHHHhhhhcCCCCCccCCCCcEEEEccchHHHHhhHHHHHHHHHcCcEEEEc
Q 014952 180 NPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIM 259 (415)
Q Consensus 180 ~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~l~~l~~G~~~v~~ 259 (415)
.++.++++... + +..+|...+...+..+...+. ..++.+++++....+-+...-. .+++++..|+..+.+
T Consensus 10 ~p~~~a~~~~~---~----~~~lTy~el~~~~~~la~~L~-~~gv~~gd~V~i~~~n~~~~~~--~~la~~~~Ga~~~~l 79 (501)
T PRK13390 10 APDRPAVIVAE---T----GEQVSYRQLDDDSAALARVLY-DAGLRTGDVVALLSDNSPEALV--VLWAALRSGLYITAI 79 (501)
T ss_pred CCCCcEEEecC---C----CeEeeHHHHHHHHHHHHHHHH-HcCCCCCCEEEEEeCCCHHHHH--HHHHHHHhCCEEecc
Confidence 45666665421 1 235888888777666665443 3467889999888877664333 578999999998887
Q ss_pred CC-CCHHHHHHHHHhcCceeeecch
Q 014952 260 QK-FDIVKLMELVQKYKVTVAPFVP 283 (415)
Q Consensus 260 ~~-~~~~~~~~~l~~~~~t~l~~~p 283 (415)
+. ..+..+...+...++..+....
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~i~~~ 104 (501)
T PRK13390 80 NHHLTAPEADYIVGDSGARVLVASA 104 (501)
T ss_pred ccCCCHHHHHHHHHhcCCcEEEEcc
Confidence 64 6778888889888888876654
No 221
>PRK05852 acyl-CoA synthetase; Validated
Probab=54.01 E-value=71 Score=31.58 Aligned_cols=92 Identities=13% Similarity=0.074 Sum_probs=65.0
Q ss_pred CCCCeEEEecCCCCCCCCceeeechHHHHHHHhhhhcCCCCCccCCCCcEEEEccchHHHHhhHHHHHHHHHcCcEEEEc
Q 014952 180 NPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIM 259 (415)
Q Consensus 180 ~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~l~~l~~G~~~v~~ 259 (415)
.++.++++... + ...+|...+..........+. ..++.+++++..++|-.--.- ..+++++..|+..+..
T Consensus 29 ~p~~~ai~~~~-~------~~~~Ty~~l~~~~~~~a~~L~-~~gv~~gd~V~i~~~n~~~~~--~~~lA~~~~G~~~v~l 98 (534)
T PRK05852 29 LPEAPALVVTA-D------RIAISYRDLARLVDDLAGQLT-RSGLLPGDRVALRMGSNAEFV--VALLAASRADLVVVPL 98 (534)
T ss_pred CCCCcEEEecC-C------CCcccHHHHHHHHHHHHHHHH-hcCCCCCCEEEEECCCcHHHH--HHHHHHHHcCcEEeec
Confidence 45666665421 1 135688888776665555443 456788999988877655333 3589999999999987
Q ss_pred CC-CCHHHHHHHHHhcCceeeec
Q 014952 260 QK-FDIVKLMELVQKYKVTVAPF 281 (415)
Q Consensus 260 ~~-~~~~~~~~~l~~~~~t~l~~ 281 (415)
++ .++..+...++..++..++.
T Consensus 99 ~~~~~~~~l~~~l~~~~~~~ii~ 121 (534)
T PRK05852 99 DPALPIAEQRVRSQAAGARVVLI 121 (534)
T ss_pred CCCCCcHHHHHHHHhCCCCEEEE
Confidence 65 67788999999999998874
No 222
>PRK08751 putative long-chain fatty acyl CoA ligase; Provisional
Probab=53.99 E-value=42 Score=33.42 Aligned_cols=96 Identities=17% Similarity=0.140 Sum_probs=68.0
Q ss_pred CCCCeEEEecCCCCCCCCceeeechHHHHHHHhhhhcCCCCCccCCCCcEEEEccchHHHHhhHHHHHHHHHcCcEEEEc
Q 014952 180 NPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIM 259 (415)
Q Consensus 180 ~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~l~~l~~G~~~v~~ 259 (415)
.++.++++.. | ..+|...+......+...+....+.++++++..++|-..-+- ..+++++..|+..+..
T Consensus 38 ~~~~~a~~~~--~-------~~~Ty~el~~~~~~la~~L~~~~g~~~g~~V~i~~~~~~~~~--~~~lA~~~~G~~~v~l 106 (560)
T PRK08751 38 FADRPAYHSF--G-------KTITYREADQLVEQFAAYLLGELQLKKGDRVALMMPNCLQYP--IATFGVLRAGLTVVNV 106 (560)
T ss_pred CCCCceEEEC--C-------ceeeHHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHHH--HHHHHHHHhCeEEecc
Confidence 3566776542 1 357888887766666553311246788999988887665433 3578999999999977
Q ss_pred CC-CCHHHHHHHHHhcCceeeecchHHH
Q 014952 260 QK-FDIVKLMELVQKYKVTVAPFVPPIV 286 (415)
Q Consensus 260 ~~-~~~~~~~~~l~~~~~t~l~~~p~~l 286 (415)
++ +....+...+.+.+++.++......
T Consensus 107 ~p~~~~~~~~~~l~~~~~~~vi~~~~~~ 134 (560)
T PRK08751 107 NPLYTPRELKHQLIDSGASVLVVIDNFG 134 (560)
T ss_pred CccCCHHHHHHHHHhcCCeEEEEcchhH
Confidence 54 6788899999999999988766544
No 223
>TIGR03208 cyc_hxne_CoA_lg cyclohexanecarboxylate-CoA ligase. Members of this protein family are cyclohexanecarboxylate-CoA ligase. This enzyme prepares the aliphatic ring compound, cyclohexanecarboxylate, for dehydrogenation and then degradation by a pathway also used in benzoyl-CoA degradation in Rhodopseudomonas palustris.
Probab=53.43 E-value=79 Score=31.27 Aligned_cols=81 Identities=19% Similarity=0.193 Sum_probs=60.3
Q ss_pred eeechHHHHHHHhhhhcCCCCCccCCCCcEEEEccchHHHHhhHHHHHHHHHcCcEEEEcCC-CCHHHHHHHHHhcCcee
Q 014952 200 VMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIMQK-FDIVKLMELVQKYKVTV 278 (415)
Q Consensus 200 v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~l~~l~~G~~~v~~~~-~~~~~~~~~l~~~~~t~ 278 (415)
..+|...+...+..+...+. ..++.+++++....+-..-.- ..+++++..|+.++..++ ...+.+...++..++..
T Consensus 52 ~~~Ty~eL~~~~~~~a~~L~-~~g~~~g~~V~i~~~~~~~~~--~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ 128 (538)
T TIGR03208 52 RRFSYRELDCRVDRIAVGLA-RLGVGRGDVVSFQLPNRWEFT--ALYLACARIGAVLNPLMPIFRERELSFMLNHADSKV 128 (538)
T ss_pred ceecHHHHHHHHHHHHHHHH-HcCCCCCCEEEEECCCCHHHH--HHHHHHHhcCEEEeccCcccCHHHHHHHHHhcCCeE
Confidence 46788888777666665443 446788999988887654332 247899999999887764 67788999999999998
Q ss_pred eecch
Q 014952 279 APFVP 283 (415)
Q Consensus 279 l~~~p 283 (415)
++..+
T Consensus 129 li~~~ 133 (538)
T TIGR03208 129 FVVPS 133 (538)
T ss_pred EEEcc
Confidence 88654
No 224
>PLN02430 long-chain-fatty-acid-CoA ligase
Probab=53.05 E-value=1.3e+02 Score=30.89 Aligned_cols=87 Identities=6% Similarity=-0.119 Sum_probs=65.2
Q ss_pred eechHHHHHHHhhhhcCCCCCccCCCCcEEEEccchHHHHhhHHHHHHHHHcCcEEEEcC-CCCHHHHHHHHHhcCceee
Q 014952 201 MLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIMQ-KFDIVKLMELVQKYKVTVA 279 (415)
Q Consensus 201 ~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~l~~l~~G~~~v~~~-~~~~~~~~~~l~~~~~t~l 279 (415)
.+|...+...+..+...+. ..++.++|++...++-..-.-. ..++++..|+..+.+. ...++.+...++..+++++
T Consensus 76 ~~Ty~el~~~v~~lA~~L~-~~Gv~~gd~V~i~~~n~~ew~~--~~lA~~~~G~v~vpl~~~~~~~~l~~il~~~~~~~v 152 (660)
T PLN02430 76 WKTYKEVYEEVLQIGSALR-ASGAEPGSRVGIYGSNCPQWIV--AMEACAAHSLICVPLYDTLGPGAVDYIVDHAEIDFV 152 (660)
T ss_pred EEEHHHHHHHHHHHHHHHH-HcCCCCCCEEEEEcCCCHHHHH--HHHHHHHcCCeEEEeccCCCHHHHHHHHhccCCCEE
Confidence 4688888777666655443 4578899999888876554333 4789999999988775 4788999999999999999
Q ss_pred ecchHHHHHHH
Q 014952 280 PFVPPIVLAVA 290 (415)
Q Consensus 280 ~~~p~~l~~l~ 290 (415)
+.....+..++
T Consensus 153 ~~~~~~~~~~~ 163 (660)
T PLN02430 153 FVQDKKIKELL 163 (660)
T ss_pred EECHHHHHHHH
Confidence 98776544443
No 225
>PRK12492 long-chain-fatty-acid--CoA ligase; Provisional
Probab=52.97 E-value=63 Score=32.22 Aligned_cols=83 Identities=16% Similarity=0.134 Sum_probs=61.8
Q ss_pred eeechHHHHHHHhhhhcCCCCCccCCCCcEEEEccchHHHHhhHHHHHHHHHcCcEEEEcCC-CCHHHHHHHHHhcCcee
Q 014952 200 VMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIMQK-FDIVKLMELVQKYKVTV 278 (415)
Q Consensus 200 v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~l~~l~~G~~~v~~~~-~~~~~~~~~l~~~~~t~ 278 (415)
..+|...+...+..+...+....++.+++++..+++-...+- ..+++++..|+..+.++. .....+...+++.++..
T Consensus 48 ~~~Ty~~l~~~~~~~a~~L~~~~gi~~gd~V~i~~~n~~e~~--~~~la~~~~G~v~v~~~~~~~~~~l~~~l~~~~~~~ 125 (562)
T PRK12492 48 VTLSYAELERHSAAFAAYLQQHTDLVPGDRIAVQMPNVLQYP--IAVFGALRAGLIVVNTNPLYTAREMRHQFKDSGARA 125 (562)
T ss_pred ceeeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHH--HHHHHHHHcCeEEeccCccCCHHHHHHHHhccCceE
Confidence 367888888777666664421135788999998887665433 357899999999887764 67888999999999998
Q ss_pred eecchH
Q 014952 279 APFVPP 284 (415)
Q Consensus 279 l~~~p~ 284 (415)
+...+.
T Consensus 126 ~i~~~~ 131 (562)
T PRK12492 126 LVYLNM 131 (562)
T ss_pred EEeccc
Confidence 876553
No 226
>PLN02249 indole-3-acetic acid-amido synthetase
Probab=52.80 E-value=7.1 Score=39.11 Aligned_cols=29 Identities=21% Similarity=0.203 Sum_probs=24.2
Q ss_pred CCCCeEEEecCCCCC-CCCceeeechHHHH
Q 014952 180 NPDDVVALPYSSGTT-GLPKGVMLTHKGLV 208 (415)
Q Consensus 180 ~~~~~a~i~~TSGtT-G~pK~v~~t~~~l~ 208 (415)
.++.+.+...||||| |++|.|.+|...+-
T Consensus 98 ~~~pi~~f~~SSGTT~g~~K~IP~T~~~l~ 127 (597)
T PLN02249 98 SSHPITEFLTSSGTSAGERKLMPTIEEDID 127 (597)
T ss_pred CCCchhhhcccCCCCCCceeEEeccHHHHH
Confidence 456677788899999 89999999996664
No 227
>TIGR03772 anch_rpt_subst anchored repeat ABC transporter, substrate-binding protein. Members of this protein family are ABC transporter permease subunits as identified by pfam00950, but additionally contain the Actinobacterial insert domain described by TIGR03769. Some homologs (lacking the insert) have been described as transporters of manganese or of chelated iron. Members of this family typically are found along with an ATP-binding cassette protein, a permease, and an LPXTG-anchored protein with two or three copies of the TIGR03769 insert that occurs just once in this protein family.
Probab=52.23 E-value=1.2e+02 Score=29.76 Aligned_cols=74 Identities=12% Similarity=0.224 Sum_probs=50.4
Q ss_pred CCEEEEEcCCchhHHHHHHHHHHhCCeEeecCCCCC--H---HHHHHHHHhcCceEEEEcccchH---HHHhhhhhcCce
Q 014952 77 GDVIMLLLQNCPQFVFAFLGASYIGATSTTANPFYT--P---PEIAKQAIASKAKIIITQAVYND---KVRDLSEHHGAR 148 (415)
Q Consensus 77 g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~--~---~~~~~~l~~~~~~~vl~~~~~~~---~~~~~~~~~~~~ 148 (415)
..+..+..++...++.-.+++-..|.. -+++... . .++...+++.++++||.++.... .+..+.+..+.+
T Consensus 370 k~r~vvt~H~af~YLa~~YGL~~~~~~--~~~~~~ePS~~~L~~Li~~IK~~~V~~IF~Epq~~~~~~~l~~IA~e~Gv~ 447 (479)
T TIGR03772 370 SRRHLITTHDAYSYLGQAYGLNIAGFV--TPNPAVEPSLADRRRLTRTIENLKVPAVFLEPNLAARSTTLNEIADELGVR 447 (479)
T ss_pred cCCEEEEECCcHHHHHHHCCCeEEeee--ccCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCCCchHHHHHHHHHcCCc
Confidence 346888888999999988888777633 2333322 2 45666777889999999877643 356666666766
Q ss_pred EEEe
Q 014952 149 IVTI 152 (415)
Q Consensus 149 ~i~~ 152 (415)
+..+
T Consensus 448 V~~l 451 (479)
T TIGR03772 448 VCAI 451 (479)
T ss_pred EEee
Confidence 5443
No 228
>PRK07769 long-chain-fatty-acid--CoA ligase; Validated
Probab=52.06 E-value=1.5e+02 Score=30.20 Aligned_cols=102 Identities=11% Similarity=0.048 Sum_probs=67.6
Q ss_pred CCCCeEEEecC--CCCCCCCceeeechHHHHHHHhhhhcCCCCCccCCCCcEEEEccchHHHHhhHHHHHHHHHcCcEEE
Q 014952 180 NPDDVVALPYS--SGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAIL 257 (415)
Q Consensus 180 ~~~~~a~i~~T--SGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~l~~l~~G~~~v 257 (415)
.++.++++... .+..| ....+|.+.+...+..+...+.. . ..++|++...++-+.-+-. .+++++..|+..+
T Consensus 34 ~~~~~a~~~~~~~~~~~~--~~~~~Ty~el~~~v~~lA~~L~~-~-~~~gd~V~i~~~n~~e~~~--~~lA~~~~G~v~v 107 (631)
T PRK07769 34 RGDKLAYRFLDFSTERDG--VARDLTWSQFGARNRAVGARLQQ-V-TKPGDRVAILAPQNLDYLI--AFFGALYAGRIAV 107 (631)
T ss_pred CCCCeEEEEeccCCCCCC--ceeEeeHHHHHHHHHHHHHHHHH-h-cCCCCEEEEEcCCChHHHH--HHHHHHHcCCEEE
Confidence 34566665432 11122 23467899888877766664432 2 5788999888877653333 5789999999887
Q ss_pred Ec-CCCC---HHHHHHHHHhcCceeeecchHHHH
Q 014952 258 IM-QKFD---IVKLMELVQKYKVTVAPFVPPIVL 287 (415)
Q Consensus 258 ~~-~~~~---~~~~~~~l~~~~~t~l~~~p~~l~ 287 (415)
.+ +... ...+...+++.++..++.......
T Consensus 108 pl~~~~~~~~~~~l~~~l~~~~~~~vi~~~~~~~ 141 (631)
T PRK07769 108 PLFDPAEPGHVGRLHAVLDDCTPSAILTTTDSAE 141 (631)
T ss_pred eeCCCCccchHHHHHHHHHhCCCCEEEEChHHHH
Confidence 66 3222 467888999999999888765543
No 229
>PLN03013 cysteine synthase
Probab=51.67 E-value=1.3e+02 Score=29.00 Aligned_cols=81 Identities=12% Similarity=0.045 Sum_probs=56.3
Q ss_pred CeeeHHHHHHHHHHHHHHHHHcC-CCCCCEEEEEcCCchhHHHHHHHHHHhCCeEeecCCCCCHHHHHHHHHhcCceEEE
Q 014952 51 DVYTYADVELTSRKVAAGLSKLG-VQKGDVIMLLLQNCPQFVFAFLGASYIGATSTTANPFYTPPEIAKQAIASKAKIII 129 (415)
Q Consensus 51 ~~~Ty~el~~~~~~~a~~L~~~g-~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~vl 129 (415)
-.-|+++= -+..+-....+.| +++|....+....+-.-+...++|...|..+..+-|...+++....++..++++++
T Consensus 149 PtGSfKdR--~A~~~l~~a~~~G~l~pG~~~VVeaSSGN~G~ALA~~a~~~G~~~~VvvP~~~s~~K~~~ira~GAeVi~ 226 (429)
T PLN03013 149 PCCSVKDR--IGYSMVTDAEQKGFISPGKSVLVEPTSGNTGIGLAFIAASRGYRLILTMPASMSMERRVLLKAFGAELVL 226 (429)
T ss_pred CccccHHH--HHHHHHHHHHHcCCcCCCCcEEEEECCcHHHHHHHHHHHHcCCCEEEEECCCCcHHHHHHHHHcCCEEEE
Confidence 34466652 2222333344455 47785555555666666777778888999888888887888889999999999999
Q ss_pred Eccc
Q 014952 130 TQAV 133 (415)
Q Consensus 130 ~~~~ 133 (415)
++..
T Consensus 227 v~~~ 230 (429)
T PLN03013 227 TDPA 230 (429)
T ss_pred ECCC
Confidence 9754
No 230
>PF02729 OTCace_N: Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain; InterPro: IPR006132 This entry contains two related enzymes: Aspartate carbamoyltransferase (2.1.3.2 from EC) (ATCase) catalyzes the conversion of aspartate and carbamoyl phosphate to carbamoylaspartate, the second step in the de novo biosynthesis of pyrimidine nucleotides []. In prokaryotes ATCase consists of two subunits: a catalytic chain (gene pyrB) and a regulatory chain (gene pyrI), while in eukaryotes it is a domain in a multi- functional enzyme (called URA2 in yeast, rudimentary in Drosophila, and CAD in mammals []) that also catalyzes other steps of the biosynthesis of pyrimidines. Ornithine carbamoyltransferase (2.1.3.3 from EC) (OTCase) catalyzes the conversion of ornithine and carbamoyl phosphate to citrulline. In mammals this enzyme participates in the urea cycle [] and is located in the mitochondrial matrix. In prokaryotes and eukaryotic microorganisms it is involved in the biosynthesis of arginine. In some bacterial species it is also involved in the degradation of arginine [] (the arginine deaminase pathway). It has been shown [] that these two enzymes are evolutionary related. The predicted secondary structure of both enzymes are similar and there are some regions of sequence similarities. One of these regions includes three residues which have been shown, by crystallographic studies [], to be implicated in binding the phosphoryl group of carbamoyl phosphate and may also play a role in trimerization of the molecules []. The carboxyl-terminal, aspartate/ornithine-binding domain is is described by IPR006131 from INTERPRO. ; GO: 0016743 carboxyl- or carbamoyltransferase activity, 0006520 cellular amino acid metabolic process; PDB: 1ML4_A 2P2G_D 2I6U_A 2YFK_B 3D6N_B 3SDS_A 3GD5_A 3R7L_B 3R7F_A 3R7D_A ....
Probab=51.53 E-value=1.2e+02 Score=23.99 Aligned_cols=97 Identities=14% Similarity=0.179 Sum_probs=60.6
Q ss_pred HHHHHHHHHHHHHHHc---CCCCCCEEEEEc-CCchh-HHHHHHHHHHhCCeEeecCCCCC-------HHHHHHHHHhcC
Q 014952 57 DVELTSRKVAAGLSKL---GVQKGDVIMLLL-QNCPQ-FVFAFLGASYIGATSTTANPFYT-------PPEIAKQAIASK 124 (415)
Q Consensus 57 el~~~~~~~a~~L~~~---g~~~g~~V~i~~-~~~~~-~~~~~lA~~~~G~~~v~l~~~~~-------~~~~~~~l~~~~ 124 (415)
.|.+++..+-....+. ..-+|..|+++. .+|.. -.....|+.++|+.++.+++..+ ..+..+.+...
T Consensus 16 ~ll~~A~~lk~~~~~~~~~~~l~gk~v~~lF~e~StRTR~SFe~A~~~LGg~~i~~~~~~s~~~k~Esl~Dtar~ls~~- 94 (142)
T PF02729_consen 16 ALLDLAKELKAAPKKGKPSQLLKGKTVALLFFEPSTRTRLSFEAAANRLGGHVIYLDPSTSSLGKGESLEDTARVLSRY- 94 (142)
T ss_dssp HHHHHHHHHHHHHHTTCCTTTTTTCEEEEEESS--HHHHHHHHHHHHHTTCEEEEEETTTSSTTTSSEHHHHHHHHHHH-
T ss_pred HHHHHHHHHHhhhhcCCCcccCCCCEEEEEecCCCchhhhhHHHhhhcceeEEEEECcccccCcCCCCHHHHHHHHHHh-
Confidence 3444444444444432 233566555554 45544 44556789999999999986543 25666777788
Q ss_pred ceEEEEcccchHHHHhhhhhcCceEEEeCC
Q 014952 125 AKIIITQAVYNDKVRDLSEHHGARIVTIDP 154 (415)
Q Consensus 125 ~~~vl~~~~~~~~~~~~~~~~~~~~i~~~~ 154 (415)
++++++=....+.+........+.+|.-.+
T Consensus 95 ~D~iv~R~~~~~~~~~~a~~~~vPVINa~~ 124 (142)
T PF02729_consen 95 VDAIVIRHPSHGALEELAEHSSVPVINAGD 124 (142)
T ss_dssp CSEEEEEESSHHHHHHHHHHCSSEEEEEEE
T ss_pred hheEEEEeccchHHHHHHHhccCCeEcCcC
Confidence 777776666667777777777888877654
No 231
>PRK08276 long-chain-fatty-acid--CoA ligase; Validated
Probab=51.42 E-value=55 Score=31.96 Aligned_cols=87 Identities=16% Similarity=0.098 Sum_probs=64.0
Q ss_pred eeechHHHHHHHhhhhcCCCCCccCCCCcEEEEccchHHHHhhHHHHHHHHHcCcEEEEcCC-CCHHHHHHHHHhcCcee
Q 014952 200 VMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIMQK-FDIVKLMELVQKYKVTV 278 (415)
Q Consensus 200 v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~l~~l~~G~~~v~~~~-~~~~~~~~~l~~~~~t~ 278 (415)
..+|...+...+......+. ..+.++++++....+-+...-. .+++++..|+..+..+. .....+...+++.+++.
T Consensus 10 ~~~ty~el~~~v~~~a~~L~-~~g~~~~~~V~i~~~~~~~~~~--~~la~~~~G~~~~~l~~~~~~~~~~~~~~~~~~~~ 86 (502)
T PRK08276 10 EVVTYGELEARSNRLAHGLR-ALGLREGDVVAILLENNPEFFE--VYWAARRSGLYYTPINWHLTAAEIAYIVDDSGAKV 86 (502)
T ss_pred cEEEHHHHHHHHHHHHHHHH-HhCCCCCCEEEEEeCCCHHHHH--HHHHHHhcCcEEEecccccCHHHHHHHHhcCCCCE
Confidence 45777878766666555443 3467889999988877654333 48999999999998864 67788889999999999
Q ss_pred eecchHHHHHH
Q 014952 279 APFVPPIVLAV 289 (415)
Q Consensus 279 l~~~p~~l~~l 289 (415)
++........+
T Consensus 87 ii~~~~~~~~~ 97 (502)
T PRK08276 87 LIVSAALADTA 97 (502)
T ss_pred EEEccchhhHH
Confidence 98877655443
No 232
>cd01449 TST_Repeat_2 Thiosulfate sulfurtransferase (TST), C-terminal, catalytic domain. TST contains 2 copies of the Rhodanese Homology Domain; this is the second repeat. Only the second repeat contains the catalytically active Cys residue.
Probab=51.09 E-value=41 Score=25.20 Aligned_cols=41 Identities=12% Similarity=0.220 Sum_probs=33.2
Q ss_pred HHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHHhCCe
Q 014952 63 RKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGAT 103 (415)
Q Consensus 63 ~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~ 103 (415)
..+...+...|+.+++.|.++|..+.....+.+.+..+|..
T Consensus 64 ~~~~~~~~~~~~~~~~~iv~yc~~g~~s~~~~~~l~~~G~~ 104 (118)
T cd01449 64 EELRALFAALGITPDKPVIVYCGSGVTACVLLLALELLGYK 104 (118)
T ss_pred HHHHHHHHHcCCCCCCCEEEECCcHHHHHHHHHHHHHcCCC
Confidence 45566677788889999999999988888888888888874
No 233
>PRK12406 long-chain-fatty-acid--CoA ligase; Provisional
Probab=50.87 E-value=59 Score=31.87 Aligned_cols=86 Identities=13% Similarity=0.136 Sum_probs=62.9
Q ss_pred eechHHHHHHHhhhhcCCCCCccCCCCcEEEEccchHHHHhhHHHHHHHHHcCcEEEEcCC-CCHHHHHHHHHhcCceee
Q 014952 201 MLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIMQK-FDIVKLMELVQKYKVTVA 279 (415)
Q Consensus 201 ~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~l~~l~~G~~~v~~~~-~~~~~~~~~l~~~~~t~l 279 (415)
.+|...+..........+. ..++.+++++..+.|-....- ..+++++..|+..+..++ .....+...+++.+++.+
T Consensus 11 ~~Ty~el~~~~~~la~~l~-~~g~~~g~~V~v~~~~~~~~~--~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~i 87 (509)
T PRK12406 11 RRSFDELAQRAARAAGGLA-ALGVRPGDCVALLMRNDFAFF--EAAYAAMRLGAYAVPVNWHFKPEEIAYILEDSGARVL 87 (509)
T ss_pred eecHHHHHHHHHHHHHHHH-HcCCCCCCEEEEEcCCCHHHH--HHHHHHHHcCeEEEecCcccCHHHHHHHHhccCCcEE
Confidence 4677777665555554332 346788999988887765433 357899999999988864 678889999999999999
Q ss_pred ecchHHHHHH
Q 014952 280 PFVPPIVLAV 289 (415)
Q Consensus 280 ~~~p~~l~~l 289 (415)
+........+
T Consensus 88 ~~~~~~~~~~ 97 (509)
T PRK12406 88 IAHADLLHGL 97 (509)
T ss_pred EEccchhhhh
Confidence 8876655543
No 234
>COG1022 FAA1 Long-chain acyl-CoA synthetases (AMP-forming) [Lipid metabolism]
Probab=50.22 E-value=1.9e+02 Score=29.37 Aligned_cols=102 Identities=15% Similarity=0.131 Sum_probs=72.6
Q ss_pred hccCCCCcEEEeCCC-------CCeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCc--hhHHHHHHHHHHhCCeEe
Q 014952 35 ISQFADRPCIINGPT-------GDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNC--PQFVFAFLGASYIGATST 105 (415)
Q Consensus 35 a~~~p~~~a~~~~~~-------~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~--~~~~~~~lA~~~~G~~~v 105 (415)
.+..|+.+|.+.-.+ |..+||+-+...+..+...+. -++++|++.-++|-. .+.... .++...|.+.+
T Consensus 186 ~~~~~dDlatiiYTSGTTG~PKGVmLth~N~~~~v~~~~~~~~--~~~~~d~~LsfLPlaHi~Er~~~-~~~~~~~g~~~ 262 (613)
T COG1022 186 APPKPDDLATIIYTSGTTGTPKGVMLTHRNLLAQVAGIDEVLP--PIGPGDRVLSFLPLAHIFERAFE-GGLALYGGVTV 262 (613)
T ss_pred CCCCccceEEEEEcCCCCCCCceEEEehHHHHHHHHHHHhhCC--CCCCCcEEEEeCcHHHHHHHHHH-HHHHhhcceEE
Confidence 456788888875443 357999999999988888775 378999999999944 222222 44444444444
Q ss_pred ecCCCCCHHHHHHHHHhcCceEEEEcccchHHHHhh
Q 014952 106 TANPFYTPPEIAKQAIASKAKIIITQAVYNDKVRDL 141 (415)
Q Consensus 106 ~l~~~~~~~~~~~~l~~~~~~~vl~~~~~~~~~~~~ 141 (415)
... .+...+..-+...+|.+++.-....+++...
T Consensus 263 ~~~--~~~~~~~~dl~~~rPt~m~~VPRvwE~i~~~ 296 (613)
T COG1022 263 LFK--EDPRTLLEDLKEVRPTVMIGVPRVWEKVYKG 296 (613)
T ss_pred Eec--CCHHHHHHHHHHhCCeEEeechHHHHHHHHH
Confidence 333 3678899999999999999877766665443
No 235
>PRK06178 acyl-CoA synthetase; Validated
Probab=49.94 E-value=61 Score=32.36 Aligned_cols=86 Identities=15% Similarity=0.088 Sum_probs=64.9
Q ss_pred eechHHHHHHHhhhhcCCCCCccCCCCcEEEEccchHHHHhhHHHHHHHHHcCcEEEEcCC-CCHHHHHHHHHhcCceee
Q 014952 201 MLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIMQK-FDIVKLMELVQKYKVTVA 279 (415)
Q Consensus 201 ~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~l~~l~~G~~~v~~~~-~~~~~~~~~l~~~~~t~l 279 (415)
.+|...+...+......+. ..+..+++++...++-...+- ..+++++..|+..+..++ .....+...+++.++..+
T Consensus 58 ~~Ty~~l~~~~~~la~~L~-~~g~~~g~~V~i~~~n~~~~~--~~~lA~~~~G~~~v~l~p~~~~~~~~~~l~~~~~~~i 134 (567)
T PRK06178 58 VITYAELDELSDRFAALLR-QRGVGAGDRVAVFLPNCPQFH--IVFFGILKLGAVHVPVSPLFREHELSYELNDAGAEVL 134 (567)
T ss_pred eeeHHHHHHHHHHHHHHHH-HcCCCCCCEEEEECCCCcHHH--HHHHHHHHhCeEEeecCCCCCHHHHHHHHHhcCCcEE
Confidence 5788888777666655443 346778899888887766433 357899999999887764 677889999999999999
Q ss_pred ecchHHHHHH
Q 014952 280 PFVPPIVLAV 289 (415)
Q Consensus 280 ~~~p~~l~~l 289 (415)
+........+
T Consensus 135 i~~~~~~~~l 144 (567)
T PRK06178 135 LALDQLAPVV 144 (567)
T ss_pred EEccchHHHH
Confidence 9888765544
No 236
>PRK08043 bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase; Validated
Probab=49.76 E-value=1.8e+02 Score=30.14 Aligned_cols=97 Identities=8% Similarity=0.037 Sum_probs=65.6
Q ss_pred CCCCcEEEeCCCC-------CeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCC--chhHHHHHHHHHHhCCeEeecC
Q 014952 38 FADRPCIINGPTG-------DVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQN--CPQFVFAFLGASYIGATSTTAN 108 (415)
Q Consensus 38 ~p~~~a~~~~~~~-------~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~--~~~~~~~~lA~~~~G~~~v~l~ 108 (415)
.++.++++...+| ..+|++.+...+..+... .++.++|++...+|- ...+...+++.+..|+..+..+
T Consensus 363 ~~~d~a~i~~TSGTTG~PKgv~~sh~~l~~~~~~~~~~---~~~~~~d~~l~~~Pl~h~~g~~~~~~~~l~~G~~vv~~~ 439 (718)
T PRK08043 363 QPEDAALILFTSGSEGHPKGVVHSHKSLLANVEQIKTI---ADFTPNDRFMSALPLFHSFGLTVGLFTPLLTGAEVFLYP 439 (718)
T ss_pred CCCCeEEEEECCCCCCCCCEEEEcHHHHHHHHHHHHHh---hCCCccCeEEEcCcchhhhhhHHHHHHHHHcCCEEEEeC
Confidence 4567777644333 468998887766655433 378899998888774 3344456778888999888665
Q ss_pred CCCCHHHHHHHHHhcCceEEEEcccchHH
Q 014952 109 PFYTPPEIAKQAIASKAKIIITQAVYNDK 137 (415)
Q Consensus 109 ~~~~~~~~~~~l~~~~~~~vl~~~~~~~~ 137 (415)
.......+...+.+.++..+.........
T Consensus 440 ~~~~~~~~~~~i~~~~vt~~~~~p~~~~~ 468 (718)
T PRK08043 440 SPLHYRIVPELVYDRNCTVLFGTSTFLGN 468 (718)
T ss_pred CcccHHHHHHHHHhcCCeEEEchHHHHHH
Confidence 43445566777888898888776654443
No 237
>PRK07867 acyl-CoA synthetase; Validated
Probab=49.42 E-value=69 Score=31.72 Aligned_cols=86 Identities=8% Similarity=-0.040 Sum_probs=62.4
Q ss_pred eeechHHHHHHHhhhhcCCCCCccCCCCcEEEEccchHHHHhhHHHHHHHHHcCcEEEEcCC-CCHHHHHHHHHhcCcee
Q 014952 200 VMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIMQK-FDIVKLMELVQKYKVTV 278 (415)
Q Consensus 200 v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~l~~l~~G~~~v~~~~-~~~~~~~~~l~~~~~t~ 278 (415)
..+|...+...+..+...+....+..+++++....+-.- .+...+++++..|+.++.++. ..++.+...+++.++.+
T Consensus 27 ~~~Ty~el~~~v~~lA~~L~~~~~~~~~~~V~i~~~n~~--~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ 104 (529)
T PRK07867 27 SFTSWREHIRGSAARAAALRARLDPTRPPHVGVLLDNTP--EFSLLLGAAALSGIVPVGLNPTRRGAALARDIAHADCQL 104 (529)
T ss_pred cEEeHHHHHHHHHHHHHHHHHhhCCCCCCEEEEECCCCH--HHHHHHHHHHhcCCEEEEecCCCChHHHHHHHHhCCCeE
Confidence 357888888777766664432124566788777776543 333357899999999997764 67888999999999999
Q ss_pred eecchHHHH
Q 014952 279 APFVPPIVL 287 (415)
Q Consensus 279 l~~~p~~l~ 287 (415)
++.......
T Consensus 105 li~~~~~~~ 113 (529)
T PRK07867 105 VLTESAHAE 113 (529)
T ss_pred EEECHhHHH
Confidence 998876554
No 238
>PLN00011 cysteine synthase
Probab=48.55 E-value=1.6e+02 Score=27.02 Aligned_cols=65 Identities=12% Similarity=-0.030 Sum_probs=48.6
Q ss_pred HHHHcC-CCCC-CEEEEEcCCchhHHHHHHHHHHhCCeEeecCCCCCHHHHHHHHHhcCceEEEEccc
Q 014952 68 GLSKLG-VQKG-DVIMLLLQNCPQFVFAFLGASYIGATSTTANPFYTPPEIAKQAIASKAKIIITQAV 133 (415)
Q Consensus 68 ~L~~~g-~~~g-~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~vl~~~~ 133 (415)
...+.| +.+| +.|. ....+-.-....+++..+|..+..+-|...++.....++..++++++++..
T Consensus 58 ~a~~~g~~~~g~~~vv-~aSsGN~g~alA~~a~~~G~~~~ivvp~~~~~~k~~~i~~~GA~V~~~~~~ 124 (323)
T PLN00011 58 DAEDKGLITPGKSTLI-EATAGNTGIGLACIGAARGYKVILVMPSTMSLERRIILRALGAEVHLTDQS 124 (323)
T ss_pred HHHHcCCCCCCCcEEE-EeCCChHHHHHHHHHHHcCCeEEEEeCCCCCHHHHHHHHHcCCEEEEECCC
Confidence 344444 5677 5554 455566666777788889998888888777788888999999999998864
No 239
>PRK06018 putative acyl-CoA synthetase; Provisional
Probab=48.50 E-value=54 Score=32.51 Aligned_cols=84 Identities=8% Similarity=-0.084 Sum_probs=62.5
Q ss_pred eeechHHHHHHHhhhhcCCCCCccCCCCcEEEEccchHHHHhhHHHHHHHHHcCcEEEEcCC-CCHHHHHHHHHhcCcee
Q 014952 200 VMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIMQK-FDIVKLMELVQKYKVTV 278 (415)
Q Consensus 200 v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~l~~l~~G~~~v~~~~-~~~~~~~~~l~~~~~t~ 278 (415)
..+|...+......+...+. ..+..+++++..+++-..-.-. .+++++..|+..+.+++ ...+.+...+++.++..
T Consensus 38 ~~~Ty~el~~~v~~la~~L~-~~g~~~gd~v~i~~~~~~~~~~--~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ 114 (542)
T PRK06018 38 VRTTYAQIHDRALKVSQALD-RDGIKLGDRVATIAWNTWRHLE--AWYGIMGIGAICHTVNPRLFPEQIAWIINHAEDRV 114 (542)
T ss_pred eEEEHHHHHHHHHHHHHHHH-HcCCCCCCEEEEEcCCchHHHH--HHHHHHhcCeEeeccccccCHHHHHHHHhccCCCE
Confidence 45788888777666665443 3467889999888776554333 47888999999988864 67888999999999999
Q ss_pred eecchHHH
Q 014952 279 APFVPPIV 286 (415)
Q Consensus 279 l~~~p~~l 286 (415)
++......
T Consensus 115 i~~~~~~~ 122 (542)
T PRK06018 115 VITDLTFV 122 (542)
T ss_pred EEEccccH
Confidence 88765443
No 240
>PRK13382 acyl-CoA synthetase; Provisional
Probab=48.06 E-value=83 Score=31.19 Aligned_cols=83 Identities=22% Similarity=0.205 Sum_probs=61.9
Q ss_pred eechHHHHHHHhhhhcCCCCCccCCCCcEEEEccchHHHHhhHHHHHHHHHcCcEEEEcCC-CCHHHHHHHHHhcCceee
Q 014952 201 MLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIMQK-FDIVKLMELVQKYKVTVA 279 (415)
Q Consensus 201 ~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~l~~l~~G~~~v~~~~-~~~~~~~~~l~~~~~t~l 279 (415)
.+|...+...+..+...+. ..+..+++++...++-+-. +...+++++..|+.++..++ .....+...+++.++.++
T Consensus 68 ~~Ty~el~~~~~~~A~~L~-~~g~~~g~~V~i~~~n~~~--~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~v 144 (537)
T PRK13382 68 TLTWRELDERSDALAAALQ-ALPIGEPRVVGIMCRNHRG--FVEALLAANRIGADILLLNTSFAGPALAEVVTREGVDTV 144 (537)
T ss_pred eecHHHHHHHHHHHHHHHH-HcCCCCCCEEEEEecCcHH--HHHHHHHHHHcCcEEEecCcccCHHHHHHHHHhcCCCEE
Confidence 5788888766665555433 3467889999888876554 33368999999999998875 577889999999999998
Q ss_pred ecchHHH
Q 014952 280 PFVPPIV 286 (415)
Q Consensus 280 ~~~p~~l 286 (415)
+......
T Consensus 145 i~~~~~~ 151 (537)
T PRK13382 145 IYDEEFS 151 (537)
T ss_pred EEchhhH
Confidence 8765543
No 241
>PRK07476 eutB threonine dehydratase; Provisional
Probab=47.74 E-value=1.5e+02 Score=27.14 Aligned_cols=51 Identities=14% Similarity=0.020 Sum_probs=40.8
Q ss_pred CCchhHHHHHHHHHHhCCeEeecCCCCCHHHHHHHHHhcCceEEEEcccch
Q 014952 85 QNCPQFVFAFLGASYIGATSTTANPFYTPPEIAKQAIASKAKIIITQAVYN 135 (415)
Q Consensus 85 ~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~vl~~~~~~ 135 (415)
..+-.-..+.+++.+.|..+..+-|...++.....++..++++++++....
T Consensus 74 SsGN~g~alA~~a~~~G~~~~i~vp~~~~~~k~~~~~~~GA~V~~~~~~~~ 124 (322)
T PRK07476 74 STGNHGRALAYAARALGIRATICMSRLVPANKVDAIRALGAEVRIVGRSQD 124 (322)
T ss_pred CCChHHHHHHHHHHHhCCCEEEEeCCCCCHHHHHHHHHcCCEEEEECCCHH
Confidence 445556667778888999888888887778888899999999999986543
No 242
>PRK12476 putative fatty-acid--CoA ligase; Provisional
Probab=47.62 E-value=1.7e+02 Score=29.54 Aligned_cols=103 Identities=15% Similarity=0.061 Sum_probs=70.4
Q ss_pred CCCCeEEEecC--CCCCCCCceeeechHHHHHHHhhhhcCCCCCccCCCCcEEEEccchHHHHhhHHHHHHHHHcCcEEE
Q 014952 180 NPDDVVALPYS--SGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAIL 257 (415)
Q Consensus 180 ~~~~~a~i~~T--SGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~l~~l~~G~~~v 257 (415)
.++.++++.-. .+++|. ...+|...+...+..+...+.. . +.+++++...++-..- +...+++++..|+..+
T Consensus 47 ~~~~~a~~~~~~~~~~~g~--~~~~Ty~el~~~~~~lA~~L~~-~-~~~gd~V~l~~~n~~e--~~~~~lA~~~aG~v~v 120 (612)
T PRK12476 47 VGDTVAYRYLDHSHSAAGC--AVELTWTQLGVRLRAVGARLQQ-V-AGPGDRVAILAPQGID--YVAGFFAAIKAGTIAV 120 (612)
T ss_pred CCCceEEEEEccCCCCCCc--ceEEeHHHHHHHHHHHHHHHHH-h-cCCCCEEEEECCCChh--HHHHHHHHHHcCceeE
Confidence 35667765432 112232 3467898888777666665432 2 6788999998887753 3335889999999988
Q ss_pred Ec-CC-CC--HHHHHHHHHhcCceeeecchHHHHH
Q 014952 258 IM-QK-FD--IVKLMELVQKYKVTVAPFVPPIVLA 288 (415)
Q Consensus 258 ~~-~~-~~--~~~~~~~l~~~~~t~l~~~p~~l~~ 288 (415)
.+ +. .. ++.+...++..++..++.....+..
T Consensus 121 pl~~~~~~~~~~~l~~~l~~~~~~~li~~~~~~~~ 155 (612)
T PRK12476 121 PLFAPELPGHAERLDTALRDAEPTVVLTTTAAAEA 155 (612)
T ss_pred ecCCCCcchhHHHHHHHHHhCCCCEEEEcHHHHHH
Confidence 76 33 22 6788999999999999987765543
No 243
>PRK07008 long-chain-fatty-acid--CoA ligase; Validated
Probab=46.67 E-value=74 Score=31.54 Aligned_cols=83 Identities=10% Similarity=-0.098 Sum_probs=61.7
Q ss_pred eechHHHHHHHhhhhcCCCCCccCCCCcEEEEccchHHHHhhHHHHHHHHHcCcEEEEcCC-CCHHHHHHHHHhcCceee
Q 014952 201 MLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIMQK-FDIVKLMELVQKYKVTVA 279 (415)
Q Consensus 201 ~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~l~~l~~G~~~v~~~~-~~~~~~~~~l~~~~~t~l 279 (415)
.+|...+...+......+. ..+..+++++..++|-..-.-. .+++++..|+..+..++ ..++.+...+++.++..+
T Consensus 39 ~~Ty~el~~~~~~~a~~L~-~~g~~~~d~v~i~~~~~~~~~~--~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~~ 115 (539)
T PRK07008 39 RYTYRDCERRAKQLAQALA-ALGVEPGDRVGTLAWNGYRHLE--AYYGVSGSGAVCHTINPRLFPEQIAYIVNHAEDRYV 115 (539)
T ss_pred EeeHHHHHHHHHHHHHHHH-HcCCCCCCEEEEEcCCcHHHHH--HHHHHHhcCcEEeecccccCHHHHHHHHhccCCcEE
Confidence 4688888776666555443 3467889999998876643332 46888999999888764 678889999999999988
Q ss_pred ecchHHH
Q 014952 280 PFVPPIV 286 (415)
Q Consensus 280 ~~~p~~l 286 (415)
...+.+.
T Consensus 116 ~~~~~~~ 122 (539)
T PRK07008 116 LFDLTFL 122 (539)
T ss_pred EEcchhH
Confidence 7776554
No 244
>PF09269 DUF1967: Domain of unknown function (DUF1967); InterPro: IPR015349 The Obg family comprises a group of ancient P-loop small G proteins (GTPases) belonging to the TRAFAC (for translation factors) class and can be subdivided into several distinct protein subfamilies []. OBG GTPases have been found in both prokaryotes and eukaryotes []. The structure of the OBG GTPase from Thermus thermophilus has been determined []. This entry represents a C-terminal domain found in certain OBG GTPases. This domain contains a four-stranded beta sheet and three alpha helices flanked by an additional beta strand. It is predominantly found in the bacterial GTP-binding protein Obg, and is functionally uncharacterised. ; GO: 0000166 nucleotide binding; PDB: 1UDX_A.
Probab=46.53 E-value=16 Score=24.75 Aligned_cols=24 Identities=29% Similarity=0.512 Sum_probs=14.8
Q ss_pred HHHHHHHHHHHHHcCCCCCCEEEE
Q 014952 59 ELTSRKVAAGLSKLGVQKGDVIML 82 (415)
Q Consensus 59 ~~~~~~~a~~L~~~g~~~g~~V~i 82 (415)
.-+...+-..|+++|++.||.|-|
T Consensus 39 ~L~~~Gv~~~L~~~G~~~GD~V~I 62 (69)
T PF09269_consen 39 KLKKMGVEKALRKAGAKEGDTVRI 62 (69)
T ss_dssp HHHHTTHHHHHHTTT--TT-EEEE
T ss_pred HHHHCCHHHHHHHcCCCCCCEEEE
Confidence 334445566788899999999876
No 245
>cd01519 RHOD_HSP67B2 Member of the Rhodanese Homology Domain superfamily. This CD includes the heat shock protein 67B2 of Drosophila melanogaster and other similar proteins, many of which are uncharacterized.
Probab=46.42 E-value=56 Score=23.82 Aligned_cols=52 Identities=8% Similarity=-0.066 Sum_probs=38.0
Q ss_pred eeeHHHHHHH----HHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHHhCCe
Q 014952 52 VYTYADVELT----SRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGAT 103 (415)
Q Consensus 52 ~~Ty~el~~~----~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~ 103 (415)
.+.+.++... ...+...+...++.+++.|.++|.++.....+...+...|..
T Consensus 37 ~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ivv~c~~g~~s~~~~~~l~~~G~~ 92 (106)
T cd01519 37 NIPLSSLPDALALSEEEFEKKYGFPKPSKDKELIFYCKAGVRSKAAAELARSLGYE 92 (106)
T ss_pred EechHHhhhhhCCCHHHHHHHhcccCCCCCCeEEEECCCcHHHHHHHHHHHHcCCc
Confidence 4556665433 235666676677878889999999988877778888888874
No 246
>PF06543 Lac_bphage_repr: Lactococcus bacteriophage repressor; InterPro: IPR009498 This entry represents the C terminus of various Lactococcus bacteriophage repressor proteins.
Probab=46.35 E-value=16 Score=22.40 Aligned_cols=22 Identities=18% Similarity=0.348 Sum_probs=19.9
Q ss_pred eeeeecCCCCCHHHHHHHHhhC
Q 014952 304 RTVMSGAAPMGKELEDAVRAKL 325 (415)
Q Consensus 304 r~v~~gG~~l~~~~~~~~~~~~ 325 (415)
+++.++|.|++.++...++..|
T Consensus 22 ~wvSf~GrPltdevK~a~k~i~ 43 (49)
T PF06543_consen 22 KWVSFDGRPLTDEVKEAMKLIF 43 (49)
T ss_pred HheeeCCeeCCHHHHHHHHHHH
Confidence 5788999999999999999887
No 247
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=46.24 E-value=2.1e+02 Score=31.48 Aligned_cols=100 Identities=13% Similarity=0.073 Sum_probs=70.1
Q ss_pred CCCCcEEEeCCCC-------CeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCc--hhHHHHHHHHHHhCCeEeecC
Q 014952 38 FADRPCIINGPTG-------DVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNC--PQFVFAFLGASYIGATSTTAN 108 (415)
Q Consensus 38 ~p~~~a~~~~~~~-------~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~--~~~~~~~lA~~~~G~~~v~l~ 108 (415)
.++.++++...++ ..+|.+.+...+...... .++.++|++...+|-. ..+....++.+..|+..+...
T Consensus 780 ~~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~---~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~g~~~v~~~ 856 (1146)
T PRK08633 780 KPDDTATIIFSSGSEGEPKGVMLSHHNILSNIEQISDV---FNLRNDDVILSSLPFFHSFGLTVTLWLPLLEGIKVVYHP 856 (1146)
T ss_pred CCCCEEEEEECCCCCCCCceEEechHHHHHHHHHHHHh---cCCCCCCEEEEcCcHHHHHhHHHHHHHHHHCCCEEEEeC
Confidence 4577777754333 468888887766655443 3677889887776632 333444677778898887766
Q ss_pred CCCCHHHHHHHHHhcCceEEEEcccchHHHHh
Q 014952 109 PFYTPPEIAKQAIASKAKIIITQAVYNDKVRD 140 (415)
Q Consensus 109 ~~~~~~~~~~~l~~~~~~~vl~~~~~~~~~~~ 140 (415)
...+.+.+.+.+++.++.++.........+.+
T Consensus 857 ~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~ 888 (1146)
T PRK08633 857 DPTDALGIAKLVAKHRATILLGTPTFLRLYLR 888 (1146)
T ss_pred CCCCHHHHHHHHHHcCCeEEEecHHHHHHHHh
Confidence 55678889999999999999988876665443
No 248
>PLN02556 cysteine synthase/L-3-cyanoalanine synthase
Probab=46.14 E-value=1.7e+02 Score=27.50 Aligned_cols=62 Identities=18% Similarity=0.123 Sum_probs=48.4
Q ss_pred HcC-CCCCCEEEEEcCCchhHHHHHHHHHHhCCeEeecCCCCCHHHHHHHHHhcCceEEEEcc
Q 014952 71 KLG-VQKGDVIMLLLQNCPQFVFAFLGASYIGATSTTANPFYTPPEIAKQAIASKAKIIITQA 132 (415)
Q Consensus 71 ~~g-~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~vl~~~ 132 (415)
+.| +++|....+....+-.-+...++|...|..+..+-|..........++..++++++++.
T Consensus 103 ~~G~i~pG~~~vV~aSsGN~G~alA~~a~~~G~~~~ivvp~~~~~~k~~~lr~~GA~Vi~~~~ 165 (368)
T PLN02556 103 KKNLITPGKTTLIEPTSGNMGISLAFMAAMKGYKMILTMPSYTSLERRVTMRAFGAELVLTDP 165 (368)
T ss_pred HcCCcCCCCCEEEEeCCchHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHcCCEEEEECC
Confidence 344 56775445555666677777788899999988888887888889999999999999974
No 249
>PTZ00216 acyl-CoA synthetase; Provisional
Probab=45.98 E-value=1e+02 Score=31.92 Aligned_cols=90 Identities=9% Similarity=-0.079 Sum_probs=68.1
Q ss_pred ceeeechHHHHHHHhhhhcCCCCCccCCCCcEEEEccchHHHHhhHHHHHHHHHcCcEEEEcC-CCCHHHHHHHHHhcCc
Q 014952 198 KGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIMQ-KFDIVKLMELVQKYKV 276 (415)
Q Consensus 198 K~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~l~~l~~G~~~v~~~-~~~~~~~~~~l~~~~~ 276 (415)
+...+|...+...+..+...+. ..++++++++..+++-..- +....++++..|+..+... ..+++.+...+++.++
T Consensus 118 ~~~~lTy~el~~~~~~lA~~L~-~~Gv~~gd~V~i~~~n~~e--~~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~ 194 (700)
T PTZ00216 118 ETRYITYAELWERIVNFGRGLA-ELGLTKGSNVAIYEETRWE--WLASIYGIWSQSMVAATVYANLGEDALAYALRETEC 194 (700)
T ss_pred CceEeEHHHHHHHHHHHHHHHH-HhCCCCCCEEEEEcCCCHH--HHHHHHHHHHcCCeEEeeCCCCCHHHHHhhhhccCc
Confidence 3567899988887777666543 4578899999988876543 3335788999999887764 4688899999999999
Q ss_pred eeeecchHHHHHHH
Q 014952 277 TVAPFVPPIVLAVA 290 (415)
Q Consensus 277 t~l~~~p~~l~~l~ 290 (415)
..+++....+..+.
T Consensus 195 ~~lv~~~~~~~~l~ 208 (700)
T PTZ00216 195 KAIVCNGKNVPNLL 208 (700)
T ss_pred cEEEECHHHHHHHH
Confidence 99988776655543
No 250
>TIGR03595 Obg_CgtA_exten Obg family GTPase CgtA, C-terminal extension. CgtA (see model TIGR02729) is a broadly conserved member of the obg family of GTPases associated with ribosome maturation. This model represents a unique C-terminal domain found in some but not all sequences of CgtA. This region is preceded, and may be followed, by a region of low-complexity sequence.
Probab=45.30 E-value=27 Score=23.66 Aligned_cols=19 Identities=32% Similarity=0.513 Sum_probs=15.3
Q ss_pred HHHHHHHcCCCCCCEEEEE
Q 014952 65 VAAGLSKLGVQKGDVIMLL 83 (415)
Q Consensus 65 ~a~~L~~~g~~~g~~V~i~ 83 (415)
+-..|+++|++.||.|-|.
T Consensus 45 v~~~L~~~G~~~GD~V~Ig 63 (69)
T TIGR03595 45 VEDALRKAGAKDGDTVRIG 63 (69)
T ss_pred HHHHHHHcCCCCCCEEEEc
Confidence 4556888899999999875
No 251
>PRK06381 threonine synthase; Validated
Probab=44.80 E-value=1e+02 Score=28.27 Aligned_cols=89 Identities=15% Similarity=-0.023 Sum_probs=58.0
Q ss_pred CcEEEeCCCCCeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHHhCCeEeecCCCCCHHHHHHHH
Q 014952 41 RPCIINGPTGDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGATSTTANPFYTPPEIAKQA 120 (415)
Q Consensus 41 ~~a~~~~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l 120 (415)
++.+-.+..+-.=||++- .+..+...+.+.|. +.| +....+-.-..+.++|...|..+..+-|...++.....+
T Consensus 32 ~i~~K~E~~nptGS~K~R--~a~~~l~~a~~~g~---~~l-v~aSsGN~g~alA~~aa~~G~~~~ivvp~~~~~~~~~~l 105 (319)
T PRK06381 32 KIYLKFEGANPTGTQKDR--IAEAHVRRAMRLGY---SGI-TVGTCGNYGASIAYFARLYGLKAVIFIPRSYSNSRVKEM 105 (319)
T ss_pred eEEEEecCCCCccCcHHH--HHHHHHHHHHHcCC---CEE-EEeCCcHHHHHHHHHHHHcCCcEEEEECCCCCHHHHHHH
Confidence 566655544455566552 22233333444453 344 445556667777788889998888777776767777899
Q ss_pred HhcCceEEEEcccch
Q 014952 121 IASKAKIIITQAVYN 135 (415)
Q Consensus 121 ~~~~~~~vl~~~~~~ 135 (415)
+..+++++++..+..
T Consensus 106 ~~~GA~V~~~~~~~~ 120 (319)
T PRK06381 106 EKYGAEIIYVDGKYE 120 (319)
T ss_pred HHcCCEEEEcCCCHH
Confidence 999999999987543
No 252
>KOG1250 consensus Threonine/serine dehydratases [Amino acid transport and metabolism]
Probab=44.58 E-value=1e+02 Score=28.95 Aligned_cols=55 Identities=16% Similarity=0.165 Sum_probs=46.4
Q ss_pred EEcCCchhHHHHHHHHHHhCCeEeecCCCCCHHHHHHHHHhcCceEEEEcccchH
Q 014952 82 LLLQNCPQFVFAFLGASYIGATSTTANPFYTPPEIAKQAIASKAKIIITQAVYND 136 (415)
Q Consensus 82 i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~vl~~~~~~~ 136 (415)
+++.-+-....+.+|+.++|+.+..+-|..++......++..++.+++..++..+
T Consensus 118 iasSaGNha~a~Ayaa~~LgipaTIVmP~~tp~~kiq~~~nlGA~Vil~G~~~de 172 (457)
T KOG1250|consen 118 IASSAGNHAQAAAYAARKLGIPATIVMPVATPLMKIQRCRNLGATVILSGEDWDE 172 (457)
T ss_pred EEecCccHHHHHHHHHHhcCCceEEEecCCChHHHHHHHhccCCEEEEecccHHH
Confidence 4445555677888999999999999999999999999999999999998876544
No 253
>TIGR02275 DHB_AMP_lig 2,3-dihydroxybenzoate-AMP ligase. Proteins in this family belong to the AMP-binding enzyme family (pfam00501). Members activate 2,3-dihydroxybenzoate (DHB) by ligation of AMP from ATP with the release of pyrophosphate; many are involved in synthesis of siderophores such as enterobactin, vibriobactin, vulnibactin, etc. The most closely related proteine believed to differ in function activates salicylate rather than DHB.
Probab=44.36 E-value=2.9e+02 Score=27.16 Aligned_cols=98 Identities=13% Similarity=0.038 Sum_probs=66.8
Q ss_pred CCCCcEEEeCCCC-------CeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHH---HHHHHHHhCCeEeec
Q 014952 38 FADRPCIINGPTG-------DVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVF---AFLGASYIGATSTTA 107 (415)
Q Consensus 38 ~p~~~a~~~~~~~-------~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~---~~lA~~~~G~~~v~l 107 (415)
.++.++++...++ ..+|...+........ ...++.++|++...+|..-.+-. ..++++..|+..+..
T Consensus 181 ~~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~---~~~~~~~~d~~l~~~P~~h~~~~~~~~~~~~l~~G~~~v~~ 257 (527)
T TIGR02275 181 KSDEVAFFQLSGGSTGTPKLIPRTHNDYYYSVRRSV---EICWLTQQTRYLCALPAAHNYPLSSPGALGVFYAGGCVVLA 257 (527)
T ss_pred CCCccEEEEeCCCCCCCCceeeeehHHHHHHHHHHH---hhcCCCcCCEEEECCChHhhhhhhHHHHHHHHhcCCeEEEC
Confidence 4567777644333 4688888776555433 34577889988887775433222 357778889887664
Q ss_pred CCCCCHHHHHHHHHhcCceEEEEcccchHHHH
Q 014952 108 NPFYTPPEIAKQAIASKAKIIITQAVYNDKVR 139 (415)
Q Consensus 108 ~~~~~~~~~~~~l~~~~~~~vl~~~~~~~~~~ 139 (415)
+ ......+...+++.++.++.........+.
T Consensus 258 ~-~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~ 288 (527)
T TIGR02275 258 P-DPSPTDCFPLIERHKVTVTALVPPAVALWM 288 (527)
T ss_pred C-CCCHHHHHHHHHHhCCeEEEecHHHHHHHH
Confidence 4 456777888999999999999887665543
No 254
>cd01561 CBS_like CBS_like: This subgroup includes Cystathionine beta-synthase (CBS) and Cysteine synthase. CBS is a unique heme-containing enzyme that catalyzes a pyridoxal 5'-phosphate (PLP)-dependent condensation of serine and homocysteine to give cystathionine. Deficiency of CBS leads to homocystinuria, an inherited disease of sulfur metabolism characterized by increased levels of the toxic metabolite homocysteine. Cysteine synthase on the other hand catalyzes the last step of cysteine biosynthesis. This subgroup also includes an O-Phosphoserine sulfhydrylase found in hyperthermophilic archaea which produces L-cysteine from sulfide and the more thermostable O-phospho-L-serine.
Probab=43.61 E-value=2.4e+02 Score=25.28 Aligned_cols=65 Identities=20% Similarity=0.073 Sum_probs=47.9
Q ss_pred HHHcCC-CCCCEEEEEcCCchhHHHHHHHHHHhCCeEeecCCCCCHHHHHHHHHhcCceEEEEcccc
Q 014952 69 LSKLGV-QKGDVIMLLLQNCPQFVFAFLGASYIGATSTTANPFYTPPEIAKQAIASKAKIIITQAVY 134 (415)
Q Consensus 69 L~~~g~-~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~vl~~~~~ 134 (415)
+.+.|. ++|+.|.. ...+-.-....++|.++|..+..+-|..........++..++++++++...
T Consensus 44 a~~~g~~~~~~~vv~-~SsGN~g~alA~~a~~~G~~~~i~vp~~~~~~k~~~~~~~Ga~v~~~~~~~ 109 (291)
T cd01561 44 AEKRGLLKPGTTIIE-PTSGNTGIGLAMVAAAKGYRFIIVMPETMSEEKRKLLRALGAEVILTPEAE 109 (291)
T ss_pred HHHcCCCCCCCEEEE-eCCChHHHHHHHHHHHcCCeEEEEECCCCCHHHHHHHHHcCCEEEEeCCCC
Confidence 334453 35665544 555666677778888999988888887777777889999999999998754
No 255
>PRK06060 acyl-CoA synthetase; Validated
Probab=43.58 E-value=90 Score=32.26 Aligned_cols=83 Identities=16% Similarity=0.097 Sum_probs=61.4
Q ss_pred eechHHHHHHHhhhhcCCCCCccCCCCcEEEEccchHHHHhhHHHHHHHHHcCcEEEEcCC-CCHHHHHHHHHhcCceee
Q 014952 201 MLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIMQK-FDIVKLMELVQKYKVTVA 279 (415)
Q Consensus 201 ~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~l~~l~~G~~~v~~~~-~~~~~~~~~l~~~~~t~l 279 (415)
.+|...+......+...+. ..+..+++++..+++-+..+-. .+++++..|+..+.+++ .....+...+++.++.++
T Consensus 30 ~~Ty~eL~~~~~~lA~~L~-~~g~~~g~~V~i~~~~~~~~~~--~~la~~~aG~~~vpi~p~~~~~~l~~~l~~~~~~~v 106 (705)
T PRK06060 30 VVTHGQIHDGAARLGEVLR-NRGLSSGDRVLLCLPDSPDLVQ--LLLACLARGVMAFLANPELHRDDHALAARNTEPALV 106 (705)
T ss_pred ceeHHHHHHHHHHHHHHHH-HcCCCCCCEEEEECCCCHHHHH--HHHHHHHhCcEEEecCCCCCHHHHHHHHhcCCCcEE
Confidence 4788888776666555443 3467889999998887664443 47899999999888764 567788888888898888
Q ss_pred ecchHHH
Q 014952 280 PFVPPIV 286 (415)
Q Consensus 280 ~~~p~~l 286 (415)
+......
T Consensus 107 i~~~~~~ 113 (705)
T PRK06060 107 VTSDALR 113 (705)
T ss_pred EEchHHh
Confidence 7755433
No 256
>TIGR01138 cysM cysteine synthase B. Alternate name: O-acetylserine (thiol)-lyase
Probab=43.54 E-value=2.3e+02 Score=25.54 Aligned_cols=90 Identities=14% Similarity=0.044 Sum_probs=57.5
Q ss_pred CCcEEEeCCCCCeeeHHHHHHHHHHHHHHHHHcCC-CCCCEEEEEcCCchhHHHHHHHHHHhCCeEeecCCCCCHHHHHH
Q 014952 40 DRPCIINGPTGDVYTYADVELTSRKVAAGLSKLGV-QKGDVIMLLLQNCPQFVFAFLGASYIGATSTTANPFYTPPEIAK 118 (415)
Q Consensus 40 ~~~a~~~~~~~~~~Ty~el~~~~~~~a~~L~~~g~-~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~ 118 (415)
.++.+-.+..+..-|++.-. +..+-....+.|. .+|+.|.- ...+-.-....++|.+.|..+..+-|...++....
T Consensus 23 ~~i~~K~E~~nptGS~K~R~--a~~~v~~a~~~g~~~~g~~vv~-aSsGN~g~alA~~a~~~G~~~~i~~p~~~~~~k~~ 99 (290)
T TIGR01138 23 SEVWLKLEGNNPAGSVKDRP--ALSMIVEAEKRGEIKPGDVLIE-ATSGNTGIALAMIAALKGYRMKLLMPDNMSQERKA 99 (290)
T ss_pred CeEEEEEccCCCCccHHHHH--HHHHHHHHHHcCCCCCCCEEEE-ECCChHHHHHHHHHHHcCCeEEEEECCCCCHHHHH
Confidence 34555554334444444322 2222233334454 67776655 44455566667788889998888888777777888
Q ss_pred HHHhcCceEEEEcc
Q 014952 119 QAIASKAKIIITQA 132 (415)
Q Consensus 119 ~l~~~~~~~vl~~~ 132 (415)
.++..++++++++.
T Consensus 100 ~~~~~GA~v~~v~~ 113 (290)
T TIGR01138 100 AMRAYGAELILVTK 113 (290)
T ss_pred HHHHcCCEEEEeCC
Confidence 99999999999875
No 257
>PRK10946 entE enterobactin synthase subunit E; Provisional
Probab=43.06 E-value=2.5e+02 Score=27.78 Aligned_cols=98 Identities=13% Similarity=-0.010 Sum_probs=67.3
Q ss_pred CCCcEEEeCCCC-------CeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHH---HHHHHHHHhCCeEeecC
Q 014952 39 ADRPCIINGPTG-------DVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFV---FAFLGASYIGATSTTAN 108 (415)
Q Consensus 39 p~~~a~~~~~~~-------~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~---~~~lA~~~~G~~~v~l~ 108 (415)
++.++++...++ ..+|.+.+...+...... .++.++|++...+|-.-.+- ...++++..|+..+...
T Consensus 181 ~~~~a~i~~TSGTTG~PKgV~~s~~~l~~~~~~~~~~---~~~~~~~~~l~~~p~~h~~~~~~~~~~~~l~~g~~~~~~~ 257 (536)
T PRK10946 181 ADEVAFFQLSGGSTGTPKLIPRTHNDYYYSVRRSVEI---CGFTPQTRYLCALPAAHNYPMSSPGALGVFLAGGTVVLAP 257 (536)
T ss_pred CCCeEEEEeCCCCCCCCcEEEEehHHHHHHHHHHHHh---cCCCCCceEEEecCccccccchhhhHHHHhhcCcEEEECC
Confidence 466666543333 468999988877665443 47888998888777543222 24678888899887654
Q ss_pred CCCCHHHHHHHHHhcCceEEEEcccchHHHHh
Q 014952 109 PFYTPPEIAKQAIASKAKIIITQAVYNDKVRD 140 (415)
Q Consensus 109 ~~~~~~~~~~~l~~~~~~~vl~~~~~~~~~~~ 140 (415)
......+...+.+.++.++.........+..
T Consensus 258 -~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~ 288 (536)
T PRK10946 258 -DPSATLCFPLIEKHQVNVTALVPPAVSLWLQ 288 (536)
T ss_pred -CCCHHHHHHHHHHhCCcEEEeChHHHHHHHh
Confidence 4466777888999999999888776655543
No 258
>PRK12582 acyl-CoA synthetase; Provisional
Probab=43.04 E-value=72 Score=32.41 Aligned_cols=81 Identities=15% Similarity=0.031 Sum_probs=59.5
Q ss_pred eeechHHHHHHHhhhhcCCCCCccCCCCcEEEEccchHHHHhhHHHHHHHHHcCcEEEEcCC-CC-----HHHHHHHHHh
Q 014952 200 VMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIMQK-FD-----IVKLMELVQK 273 (415)
Q Consensus 200 v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~l~~l~~G~~~v~~~~-~~-----~~~~~~~l~~ 273 (415)
..+|...+...+..+...+. ..++.+++++..+++-..- +...+++++..|+..+.+++ .. .+.+...+++
T Consensus 79 ~~~Ty~el~~~v~~lA~~L~-~~Gv~~gd~V~i~~~n~~e--~~~~~lA~~~~G~v~vpl~p~~~~~~~~~~~l~~~l~~ 155 (624)
T PRK12582 79 RKVTYGEAKRAVDALAQALL-DLGLDPGRPVMILSGNSIE--HALMTLAAMQAGVPAAPVSPAYSLMSHDHAKLKHLFDL 155 (624)
T ss_pred EEeEHHHHHHHHHHHHHHHH-HcCCCCCCEEEEecCCCHH--HHHHHHHHHHcCCeEeeccCccccccCCHHHHHHHHHh
Confidence 46899988877766665443 3467889999998885443 33357899999999988864 23 3788889999
Q ss_pred cCceeeecch
Q 014952 274 YKVTVAPFVP 283 (415)
Q Consensus 274 ~~~t~l~~~p 283 (415)
.++..++...
T Consensus 156 ~~~~~vi~~~ 165 (624)
T PRK12582 156 VKPRVVFAQS 165 (624)
T ss_pred cCCcEEEecC
Confidence 9988887653
No 259
>PRK11493 sseA 3-mercaptopyruvate sulfurtransferase; Provisional
Probab=42.96 E-value=53 Score=29.48 Aligned_cols=52 Identities=12% Similarity=0.057 Sum_probs=42.5
Q ss_pred eeeHHHHHH-----HHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHHhCCe
Q 014952 52 VYTYADVEL-----TSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGAT 103 (415)
Q Consensus 52 ~~Ty~el~~-----~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~ 103 (415)
.+.|.++.. ....+...|.+.|+.+++.|.++|.++...-.+.+++..+|..
T Consensus 201 ~i~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~ii~yC~~G~~A~~~~~~l~~~G~~ 257 (281)
T PRK11493 201 NVPWTELVREGELKTTDELDAIFFGRGVSFDRPIIASCGSGVTAAVVVLALATLDVP 257 (281)
T ss_pred CCCHHHhcCCCCcCCHHHHHHHHHhcCCCCCCCEEEECCcHHHHHHHHHHHHHcCCC
Confidence 466777653 2456677778889999999999999999999999999999986
No 260
>PRK08974 long-chain-fatty-acid--CoA ligase; Validated
Probab=42.79 E-value=70 Score=31.85 Aligned_cols=83 Identities=16% Similarity=0.161 Sum_probs=60.7
Q ss_pred eechHHHHHHHhhhhcCCCCCccCCCCcEEEEccchHHHHhhHHHHHHHHHcCcEEEEcCC-CCHHHHHHHHHhcCceee
Q 014952 201 MLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIMQK-FDIVKLMELVQKYKVTVA 279 (415)
Q Consensus 201 ~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~l~~l~~G~~~v~~~~-~~~~~~~~~l~~~~~t~l 279 (415)
.+|...+......+...+....+..+++++..+.+-..- +...+|+++..|+..+.+++ ...+.+...+++.++..+
T Consensus 48 ~lTy~~l~~~~~~la~~L~~~~g~~~g~~V~i~~~~~~~--~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~i 125 (560)
T PRK08974 48 VMTFRKLEERSRAFAAYLQNGLGLKKGDRVALMMPNLLQ--YPIALFGILRAGMIVVNVNPLYTPRELEHQLNDSGAKAI 125 (560)
T ss_pred cccHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHH--HHHHHHHHHHcCcEEeccCccCCHHHHHHHHHhcCceEE
Confidence 568888877766666544212357788998888765543 33357899999999998865 577889999999999998
Q ss_pred ecchHH
Q 014952 280 PFVPPI 285 (415)
Q Consensus 280 ~~~p~~ 285 (415)
...+..
T Consensus 126 i~~~~~ 131 (560)
T PRK08974 126 VIVSNF 131 (560)
T ss_pred EEeccc
Confidence 876543
No 261
>PRK11706 TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional
Probab=42.61 E-value=1.1e+02 Score=28.72 Aligned_cols=57 Identities=19% Similarity=0.165 Sum_probs=36.1
Q ss_pred HHcCCCCCCEEEEEcCCchhHHHHHHHHHHhCCeEeecCCC-----CCHHHHHHHHHhcCceEEEE
Q 014952 70 SKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGATSTTANPF-----YTPPEIAKQAIASKAKIIIT 130 (415)
Q Consensus 70 ~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~-----~~~~~~~~~l~~~~~~~vl~ 130 (415)
...++++||.|.+-.+. +.....++...|+.++.++.+ .+.+++...+.. +.++|+.
T Consensus 64 ~~~~~~~Gd~Viv~~~t---~~~~~~~~~~~G~~~v~~d~d~~~~~~d~~~le~~i~~-~tk~i~~ 125 (375)
T PRK11706 64 LLLDIQPGDEVIMPSYT---FVSTANAFVLRGAKIVFVDIRPDTMNIDETLIEAAITP-KTRAIVP 125 (375)
T ss_pred HHhCCCCCCEEEECCCC---cHHHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHhcCC-CCeEEEE
Confidence 33467899988775543 444456677889888877633 345677766643 4555553
No 262
>PRK06710 long-chain-fatty-acid--CoA ligase; Validated
Probab=42.50 E-value=70 Score=31.86 Aligned_cols=83 Identities=13% Similarity=0.063 Sum_probs=61.4
Q ss_pred eechHHHHHHHhhhhcCCCCCccCCCCcEEEEccchHHHHhhHHHHHHHHHcCcEEEEcCC-CCHHHHHHHHHhcCceee
Q 014952 201 MLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIMQK-FDIVKLMELVQKYKVTVA 279 (415)
Q Consensus 201 ~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~l~~l~~G~~~v~~~~-~~~~~~~~~l~~~~~t~l 279 (415)
.+|...+...+..+...+. ..++.+++++...++-..-+- ..+++++..|+..+.+++ +..+.+...++..+++.+
T Consensus 49 ~~ty~eL~~~~~~la~~L~-~~gv~~gd~V~i~~~~~~~~~--~~~lA~~~~G~~~vpi~p~~~~~~l~~~l~~~~~~~i 125 (563)
T PRK06710 49 DITFSVFHDKVKRFANYLQ-KLGVEKGDRVAIMLPNCPQAV--IGYYGTLLAGGIVVQTNPLYTERELEYQLHDSGAKVI 125 (563)
T ss_pred eecHHHHHHHHHHHHHHHH-HcCCCCCCEEEEECCCChHHH--HHHHHHHHcCeEEeccCcccCHHHHHHHHhccCCeEE
Confidence 5788888776666555432 335678899988887765433 357899999988887764 677889999999999999
Q ss_pred ecchHHH
Q 014952 280 PFVPPIV 286 (415)
Q Consensus 280 ~~~p~~l 286 (415)
.......
T Consensus 126 i~~~~~~ 132 (563)
T PRK06710 126 LCLDLVF 132 (563)
T ss_pred EEeccch
Confidence 8876443
No 263
>cd01019 ZnuA Zinc binding protein ZnuA. These proteins have been shown to function as initial receptors in the ABC uptake of Zn2+. They belong to the TroA superfamily of periplasmic metal binding proteins that share a distinct fold and ligand binding mechanism. They are comprised of two globular subdomains connected by a single helix and bind their specific ligands in the cleft between these domains. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind the metal ion in the cleft between these domains. In addition, these proteins sometimes have a low complexity region containing a metal-binding histidine-rich motif (repetitive HDH sequence).
Probab=42.21 E-value=2.2e+02 Score=25.63 Aligned_cols=98 Identities=11% Similarity=0.129 Sum_probs=52.7
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHHhCCeEeecCCCCCHH---HHHHHHHhcCceEEEEcc
Q 014952 56 ADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGATSTTANPFYTPP---EIAKQAIASKAKIIITQA 132 (415)
Q Consensus 56 ~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~---~~~~~l~~~~~~~vl~~~ 132 (415)
.++.++.+.+-..+++.--....+..+...+...++.-.+++-..+..-.--...-++. ++...+.+.+.++||++.
T Consensus 157 ~~~~~~L~~l~~~~~~~~~~~~~~~~v~~H~af~Yl~~~~gl~~~~~~~~~~~~eps~~~l~~l~~~ik~~~v~~If~e~ 236 (286)
T cd01019 157 EAFNARLAELDATIKERLAPVKTKPFFVFHDAYGYFEKRYGLTQAGVFTIDPEIDPGAKRLAKIRKEIKEKGATCVFAEP 236 (286)
T ss_pred HHHHHHHHHHHHHHHHHhhccCCCeEEEecccHHHHHHHcCCceeeeecCCCCCCCCHHHHHHHHHHHHHcCCcEEEecC
Confidence 34444444444444432111235567778888888887776654432211111222344 455666678999999987
Q ss_pred cchH-HHHhhhhhcCceEEEeC
Q 014952 133 VYND-KVRDLSEHHGARIVTID 153 (415)
Q Consensus 133 ~~~~-~~~~~~~~~~~~~i~~~ 153 (415)
.... ..+.+.+..+.+++.++
T Consensus 237 ~~~~~~~~~ia~~~g~~v~~l~ 258 (286)
T cd01019 237 QFHPKIAETLAEGTGAKVGELD 258 (286)
T ss_pred CCChHHHHHHHHhcCceEEEec
Confidence 6544 44444455555665554
No 264
>PRK07787 acyl-CoA synthetase; Validated
Probab=42.17 E-value=3.3e+02 Score=26.31 Aligned_cols=97 Identities=18% Similarity=0.175 Sum_probs=66.7
Q ss_pred CCCCcEEEeCCCC-------CeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCC--chhHHHHHHHHHHhCCeEeecC
Q 014952 38 FADRPCIINGPTG-------DVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQN--CPQFVFAFLGASYIGATSTTAN 108 (415)
Q Consensus 38 ~p~~~a~~~~~~~-------~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~--~~~~~~~~lA~~~~G~~~v~l~ 108 (415)
.++.++++...++ ..+|++.+...+..++..+ ++.++|++....+- ...++..+++.+..|+..+...
T Consensus 126 ~~~~~a~i~~TSGTTG~PK~v~~t~~~l~~~~~~~~~~~---~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~ 202 (471)
T PRK07787 126 DPDAPALIVYTSGTTGPPKGVVLSRRAIAADLDALAEAW---QWTADDVLVHGLPLFHVHGLVLGVLGPLRIGNRFVHTG 202 (471)
T ss_pred CCCceEEEEECCCCCCCCCEEEEeHHHHHHHHHHHHHhc---CCCccceeEeccCCeeechhHHHHHHHHhcCCEEEecC
Confidence 4566666644333 3579988887766655443 67788877666553 2345566888899999988765
Q ss_pred CCCCHHHHHHHHHhcCceEEEEcccchHHHH
Q 014952 109 PFYTPPEIAKQAIASKAKIIITQAVYNDKVR 139 (415)
Q Consensus 109 ~~~~~~~~~~~l~~~~~~~vl~~~~~~~~~~ 139 (415)
. ...+.+...++ .++..+.........+.
T Consensus 203 ~-~~~~~~~~~i~-~~~t~~~~~P~~~~~l~ 231 (471)
T PRK07787 203 R-PTPEAYAQALS-EGGTLYFGVPTVWSRIA 231 (471)
T ss_pred C-CCHHHHHHHHh-hCceEEEcchHHHHHHH
Confidence 4 56788888888 88888887776655443
No 265
>COG1171 IlvA Threonine dehydratase [Amino acid transport and metabolism]
Probab=42.09 E-value=2.3e+02 Score=26.38 Aligned_cols=100 Identities=18% Similarity=0.131 Sum_probs=65.8
Q ss_pred CCCCcEEEeCCCCCeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHHhCCeEeecCCCCCHHHHH
Q 014952 38 FADRPCIINGPTGDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGATSTTANPFYTPPEIA 117 (415)
Q Consensus 38 ~p~~~a~~~~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~ 117 (415)
.+.++.+-.++-...-+|+-.- .-+++.+ |...+-++...|+-...|+.+-+ .|||.++|...+.+=|..++....
T Consensus 38 ~g~~v~lK~E~lQ~~gSFK~RG-A~n~i~~-Ls~e~~~~~gViaaSaGNHaQGv--A~aa~~lGi~a~IvMP~~tp~~Kv 113 (347)
T COG1171 38 LGAEIYLKRENLQPVGSFKIRG-AYNKLSS-LSEEEERAAGVIAASAGNHAQGV--AYAAKRLGIKATIVMPETTPKIKV 113 (347)
T ss_pred hCceEEEeeccCcccccchhhh-HHHHHHh-cChhhhhcCceEEecCCcHHHHH--HHHHHHhCCCEEEEecCCCcHHHH
Confidence 4455555554323344554322 3333443 44222233335666666776655 589999999999999999999999
Q ss_pred HHHHhcCceEEEEcccchHHHHhh
Q 014952 118 KQAIASKAKIIITQAVYNDKVRDL 141 (415)
Q Consensus 118 ~~l~~~~~~~vl~~~~~~~~~~~~ 141 (415)
..++..+..++++.....+.....
T Consensus 114 ~a~r~~GaeVil~g~~~dda~~~a 137 (347)
T COG1171 114 DATRGYGAEVILHGDNFDDAYAAA 137 (347)
T ss_pred HHHHhcCCEEEEECCCHHHHHHHH
Confidence 999999999999998876654444
No 266
>PRK09192 acyl-CoA synthetase; Validated
Probab=41.91 E-value=1.1e+02 Score=30.54 Aligned_cols=87 Identities=9% Similarity=-0.009 Sum_probs=63.8
Q ss_pred eeeechHHHHHHHhhhhcCCCCCccCCCCcEEEEccchHHHHhhHHHHHHHHHcCcEEEEcCC-CC-------HHHHHHH
Q 014952 199 GVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIMQK-FD-------IVKLMEL 270 (415)
Q Consensus 199 ~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~l~~l~~G~~~v~~~~-~~-------~~~~~~~ 270 (415)
.-.+|...+...+..+...+. ..++++++++..+.+-+.-+-. .+++++..|+..+.++. +. .+++...
T Consensus 47 ~~~~Ty~eL~~~~~~~a~~L~-~~gi~~gd~V~l~~~n~~~~~~--~~lA~~~~G~~~v~i~~~~~~~~~~~~~~~l~~~ 123 (579)
T PRK09192 47 EEALPYQTLRARAEAGARRLL-ALGLKPGDRVALIAETDGDFVE--AFFACQYAGLVPVPLPLPMGFGGRESYIAQLRGM 123 (579)
T ss_pred EEEecHHHHHHHHHHHHHHHH-HhCCCCCCEEEEEcCCchhHHH--HHHHHHHcCCeeEeccCCcccccchHHHHHHHHH
Confidence 356788888776666665443 3567899999999887554333 57899999999988853 11 5788999
Q ss_pred HHhcCceeeecchHHHHH
Q 014952 271 VQKYKVTVAPFVPPIVLA 288 (415)
Q Consensus 271 l~~~~~t~l~~~p~~l~~ 288 (415)
+++.++..++........
T Consensus 124 i~~~~~~~il~~~~~~~~ 141 (579)
T PRK09192 124 LASAQPAAIITPDELLPW 141 (579)
T ss_pred HHhcCCCEEEeChHHHHH
Confidence 999999999887765443
No 267
>PRK10717 cysteine synthase A; Provisional
Probab=41.77 E-value=2.3e+02 Score=26.09 Aligned_cols=90 Identities=14% Similarity=-0.039 Sum_probs=57.0
Q ss_pred CcEEEeCCCCCeeeHHHHHHHHHHHHHHHHHcC-CCCCCEEEEEcCCchhHHHHHHHHHHhCCeEeecCCCCCHHHHHHH
Q 014952 41 RPCIINGPTGDVYTYADVELTSRKVAAGLSKLG-VQKGDVIMLLLQNCPQFVFAFLGASYIGATSTTANPFYTPPEIAKQ 119 (415)
Q Consensus 41 ~~a~~~~~~~~~~Ty~el~~~~~~~a~~L~~~g-~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~ 119 (415)
++.+-.+..+..-|++.- .....+.. ..+.| +++|+.|.- ...+-.-..+.+++.++|..+..+-|...++.....
T Consensus 29 ~i~~K~E~~nptGS~K~R-ga~~~v~~-a~~~g~~~~g~~vv~-aSsGN~g~alA~~a~~~G~~~~vv~p~~~~~~k~~~ 105 (330)
T PRK10717 29 EILGKAEFLNPGGSVKDR-AALNIIWD-AEKRGLLKPGGTIVE-GTAGNTGIGLALVAAARGYKTVIVMPETQSQEKKDL 105 (330)
T ss_pred eEEEEeeccCCCCCchHH-HHHHHHHH-HHHcCCCCCCCEEEE-eCCcHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHH
Confidence 455544433344444432 22222333 33445 466776544 555556666677888899888888787777788899
Q ss_pred HHhcCceEEEEccc
Q 014952 120 AIASKAKIIITQAV 133 (415)
Q Consensus 120 l~~~~~~~vl~~~~ 133 (415)
++..++++++++..
T Consensus 106 ~~~~GA~V~~~~~~ 119 (330)
T PRK10717 106 LRALGAELVLVPAA 119 (330)
T ss_pred HHHcCCEEEEeCCc
Confidence 99999999998853
No 268
>TIGR01137 cysta_beta cystathionine beta-synthase. Members of this family closely resemble cysteine synthase but contain an additional C-terminal CBS domain. The function of any bacterial member included in this family is proposed but not proven.
Probab=41.62 E-value=2e+02 Score=27.79 Aligned_cols=89 Identities=17% Similarity=-0.024 Sum_probs=58.4
Q ss_pred CcEEEeCCCCCeeeHHHHHHHHHHHHHHHHHcCC-CCCCEEEEEcCCchhHHHHHHHHHHhCCeEeecCCCCCHHHHHHH
Q 014952 41 RPCIINGPTGDVYTYADVELTSRKVAAGLSKLGV-QKGDVIMLLLQNCPQFVFAFLGASYIGATSTTANPFYTPPEIAKQ 119 (415)
Q Consensus 41 ~~a~~~~~~~~~~Ty~el~~~~~~~a~~L~~~g~-~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~ 119 (415)
++.+-.+..+..-|++.-- ....+...+ +.|. .+|+.|.-. ..+-.-....++|.+.|..+..+-|...++.....
T Consensus 27 ~i~~K~E~~nptGS~K~R~-a~~~l~~a~-~~g~~~~g~~vv~~-ssGN~g~alA~~a~~~G~~~~iv~p~~~~~~k~~~ 103 (454)
T TIGR01137 27 ELLAKCEFFNPGGSVKDRI-ALRMIEDAE-ASGRLKPGDTIIEP-TSGNTGIGLALVAAIKGYKCIIVLPEKMSNEKVDV 103 (454)
T ss_pred eEEEEEhhcCCCcchHHHH-HHHHHHHHH-HcCCCCCCCEEEEe-CCcHHHHHHHHHHHHcCCeEEEEeCCCcCHHHHHH
Confidence 4555554334444554432 222333333 4454 677765554 55556677778888899988888887777778889
Q ss_pred HHhcCceEEEEcc
Q 014952 120 AIASKAKIIITQA 132 (415)
Q Consensus 120 l~~~~~~~vl~~~ 132 (415)
++..++++++++.
T Consensus 104 ~~~~GA~v~~~~~ 116 (454)
T TIGR01137 104 LKALGAEIVRTPT 116 (454)
T ss_pred HHHCCCEEEEcCC
Confidence 9999999999875
No 269
>PLN02723 3-mercaptopyruvate sulfurtransferase
Probab=41.28 E-value=60 Score=29.83 Aligned_cols=52 Identities=12% Similarity=0.146 Sum_probs=41.8
Q ss_pred eeeHHHHHHH------HHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHHhCCe
Q 014952 52 VYTYADVELT------SRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGAT 103 (415)
Q Consensus 52 ~~Ty~el~~~------~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~ 103 (415)
.+.|.++... ...+...+.++|+.+++.|.++|..+.....+++++..+|..
T Consensus 238 nip~~~~~~~~~~~~~~~el~~~~~~~gi~~~~~iv~yC~sG~~A~~~~~~L~~~G~~ 295 (320)
T PLN02723 238 CVPFPQMLDSSQTLLPAEELKKRFEQEGISLDSPIVASCGTGVTACILALGLHRLGKT 295 (320)
T ss_pred ccCHHHhcCCCCCCCCHHHHHHHHHhcCCCCCCCEEEECCcHHHHHHHHHHHHHcCCC
Confidence 4566665432 456777788889999999999999999999999999999975
No 270
>TIGR01734 D-ala-DACP-lig D-alanine--poly(phosphoribitol) ligase, subunit 1. This model represents the enzyme (also called D-alanine-D-alanyl carrier protein ligase) which activates D-alanine as an adenylate via the reaction D-ala + ATP - D-ala-AMP + PPi, and further catalyzes the condensation of the amino acid adenylate with the D-alanyl carrier protein (D-ala-ACP). The D-alanine is then further transferred to teichoic acid in the biosynthesis of lipoteichoic acid (LTA) and wall teichoic acid (WTA) in gram positive bacteria, both polysacchatides.
Probab=41.20 E-value=79 Score=30.84 Aligned_cols=82 Identities=11% Similarity=0.056 Sum_probs=59.7
Q ss_pred eeechHHHHHHHhhhhcCCCCCccCCCCcEEEEccchHHHHhhHHHHHHHHHcCcEEEEcCC-CCHHHHHHHHHhcCcee
Q 014952 200 VMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIMQK-FDIVKLMELVQKYKVTV 278 (415)
Q Consensus 200 v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~l~~l~~G~~~v~~~~-~~~~~~~~~l~~~~~t~ 278 (415)
..+|...+...+..+...+. ..++.+++++....+.+..+-. .+++++..|+.++..+. ...+.+...+++.++..
T Consensus 24 ~~~ty~el~~~~~~~a~~L~-~~g~~~~~~V~i~~~~~~~~~~--~~la~~~~G~~~v~~~~~~~~~~~~~~~~~~~~~~ 100 (502)
T TIGR01734 24 QELTYQQLKEQSDRLAAFIQ-KRILPKKSPIIVYGHMEPHMLV--AFLGSIKSGHAYIPVDTSIPSERIEMIIEAAGPEL 100 (502)
T ss_pred cEEeHHHHHHHHHHHHHHHH-HhCCCCCCeEEEEeCCCHHHHH--HHHHHHHhCCEEeCCCCcChHHHHHHHHHhcCCCE
Confidence 36888888776666655433 2356778888887776554433 47899999999887765 56677888999999999
Q ss_pred eecchH
Q 014952 279 APFVPP 284 (415)
Q Consensus 279 l~~~p~ 284 (415)
+.....
T Consensus 101 ii~~~~ 106 (502)
T TIGR01734 101 VIHTAE 106 (502)
T ss_pred EEeccc
Confidence 887654
No 271
>cd01017 AdcA Metal binding protein AcdA. These proteins have been shown to function in the ABC uptake of Zn2+ and Mn2+ and in competence for genetic transformation and adhesion. The AcdA proteins belong to the TroA superfamily of helical backbone metal receptor proteins that share a distinct fold and ligand binding mechanism. They are comprised of two globular subdomains connected by a long alpha helix and they bind their ligand in the cleft between these domains. In addition, many of these proteins have a low complexity region containing metal binding histidine-rich motif (repetitive HDH sequence).
Probab=41.15 E-value=1.8e+02 Score=25.98 Aligned_cols=76 Identities=13% Similarity=0.188 Sum_probs=45.6
Q ss_pred CEEEEEcCCchhHHHHHHHHHHhCCeEeecCCCCCH---HHHHHHHHhcCceEEEEcccchH-HHHhhhhhcCceEEEeC
Q 014952 78 DVIMLLLQNCPQFVFAFLGASYIGATSTTANPFYTP---PEIAKQAIASKAKIIITQAVYND-KVRDLSEHHGARIVTID 153 (415)
Q Consensus 78 ~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~---~~~~~~l~~~~~~~vl~~~~~~~-~~~~~~~~~~~~~i~~~ 153 (415)
.+..+...+...+++-.+++-..|..-.--.-.-+. .++...+.+.++++||++..... ....+.+..+.+++.++
T Consensus 171 ~~~~v~~H~af~Y~~~~~gl~~~~~~~~~~~~eps~~~l~~l~~~ik~~~v~~if~e~~~~~~~~~~la~~~g~~v~~ld 250 (282)
T cd01017 171 GKTFVTQHAAFGYLARRYGLKQIAIVGVSPEVEPSPKQLAELVEFVKKSDVKYIFFEENASSKIAETLAKETGAKLLVLN 250 (282)
T ss_pred CCeEEEecccHHHHHHHCCCeEEecccCCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCChHHHHHHHHHcCCcEEEec
Confidence 345667777888888777666554321101112233 35566677789999999877654 44445555666666655
No 272
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=41.08 E-value=2.7e+02 Score=31.21 Aligned_cols=99 Identities=10% Similarity=-0.010 Sum_probs=69.0
Q ss_pred CCCCcEEEeCCCC-------CeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHH-HHHHHHHHhCCeEeecCC
Q 014952 38 FADRPCIINGPTG-------DVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFV-FAFLGASYIGATSTTANP 109 (415)
Q Consensus 38 ~p~~~a~~~~~~~-------~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~-~~~lA~~~~G~~~v~l~~ 109 (415)
.|+.++++...+| ..+|.+.+......... ..+++++|++....+-+.+.- .-+++.+..|+..+..++
T Consensus 596 ~~~~~a~i~~TSGSTG~PKgV~~~h~~l~~~~~~~~~---~~~~~~~d~~l~~~~~~fd~~~~~~~~~l~~G~~l~~~~~ 672 (1296)
T PRK10252 596 QPHHTAYIIFTSGSTGRPKGVMVGQTAIVNRLLWMQN---HYPLTADDVVLQKTPCSFDVSVWEFFWPFIAGAKLVMAEP 672 (1296)
T ss_pred CCCCeEEEEECCCCCCCCCEEEeccHHHHHHHHHHHH---hcCCCCCCEEEEeCCcchhhhHHHHHHHHhCCCEEEECCh
Confidence 4667777644333 46888877665544433 347889999998888765543 346677788999887765
Q ss_pred C--CCHHHHHHHHHhcCceEEEEcccchHHHH
Q 014952 110 F--YTPPEIAKQAIASKAKIIITQAVYNDKVR 139 (415)
Q Consensus 110 ~--~~~~~~~~~l~~~~~~~vl~~~~~~~~~~ 139 (415)
. ..++.+...+.+.++.++.........+.
T Consensus 673 ~~~~~~~~~~~~i~~~~vt~~~~~Ps~l~~l~ 704 (1296)
T PRK10252 673 EAHRDPLAMQQFFAEYGVTTTHFVPSMLAAFV 704 (1296)
T ss_pred hccCCHHHHHHHHHHcCCeEEEeCHHHHHHHH
Confidence 3 45778889999999999888776655443
No 273
>PRK09029 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=40.94 E-value=93 Score=29.96 Aligned_cols=81 Identities=19% Similarity=0.116 Sum_probs=59.8
Q ss_pred eeechHHHHHHHhhhhcCCCCCccCCCCcEEEEccchHHHHhhHHHHHHHHHcCcEEEEcCC-CCHHHHHHHHHhcCcee
Q 014952 200 VMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIMQK-FDIVKLMELVQKYKVTV 278 (415)
Q Consensus 200 v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~l~~l~~G~~~v~~~~-~~~~~~~~~l~~~~~t~ 278 (415)
..+|+..+...+......+. ..+..+++++....+-....-. .+++++..|+..+..++ ..++.+...+++.++.+
T Consensus 27 ~~~ty~el~~~~~~~a~~L~-~~g~~~~~~v~l~~~~~~~~~~--~~la~~~~G~~~v~~~~~~~~~~~~~~~~~~~~~~ 103 (458)
T PRK09029 27 EVLTWQQLCARIDQLAAGFA-QQGVVEGSGVALRGKNSPETLL--AYLALLQCGARVLPLNPQLPQPLLEELLPSLTLDF 103 (458)
T ss_pred cceeHHHHHHHHHHHHHHHH-HcCCCCCCEEEEecCCCHHHHH--HHHHHHHcCCEEeecCCCCCHHHHHHHHHhcCCCE
Confidence 35788888877766665433 2357788998888776554333 47899999999998864 67778888899999888
Q ss_pred eecch
Q 014952 279 APFVP 283 (415)
Q Consensus 279 l~~~p 283 (415)
+....
T Consensus 104 ~i~~~ 108 (458)
T PRK09029 104 ALVLE 108 (458)
T ss_pred EEEcC
Confidence 87544
No 274
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=40.81 E-value=3.5e+02 Score=29.92 Aligned_cols=99 Identities=14% Similarity=0.073 Sum_probs=67.5
Q ss_pred CCCCcEEEeCCCC-------CeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCc--hhHHHHHHHHHHhCCeEeecC
Q 014952 38 FADRPCIINGPTG-------DVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNC--PQFVFAFLGASYIGATSTTAN 108 (415)
Q Consensus 38 ~p~~~a~~~~~~~-------~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~--~~~~~~~lA~~~~G~~~v~l~ 108 (415)
.++.++++...++ ..+|.+.+...+......+ +.+++|++...+|-. ..+....+..+..|+..+..+
T Consensus 791 ~~~d~a~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~---~~~~~d~~l~~~pl~h~~g~~~~~~~~l~~G~~~~~~~ 867 (1140)
T PRK06814 791 DPDDPAVILFTSGSEGTPKGVVLSHRNLLANRAQVAARI---DFSPEDKVFNALPVFHSFGLTGGLVLPLLSGVKVFLYP 867 (1140)
T ss_pred CCCCcEEEEECCCccCCCcEEEecHHHHHHHHHHHHHhh---CCCCcCEEEEecchHHHHHHHHHHHHHHHcCCEEEEec
Confidence 4677777644333 4689998877666655443 678899988887742 233345666777888887666
Q ss_pred CCCCHHHHHHHHHhcCceEEEEcccchHHHH
Q 014952 109 PFYTPPEIAKQAIASKAKIIITQAVYNDKVR 139 (415)
Q Consensus 109 ~~~~~~~~~~~l~~~~~~~vl~~~~~~~~~~ 139 (415)
.......+.+.+.+.++..+.........+.
T Consensus 868 ~~~~~~~~~~~i~~~~~t~~~~~p~~l~~l~ 898 (1140)
T PRK06814 868 SPLHYRIIPELIYDTNATILFGTDTFLNGYA 898 (1140)
T ss_pred CcccHHHHHHHHHhcCCEEEEecHHHHHHHH
Confidence 5445566778888999999888776655443
No 275
>TIGR02370 pyl_corrinoid methyltransferase cognate corrinoid proteins, Methanosarcina family. This model describes a subfamily of the B12 binding domain (pfam02607, pfam02310) proteins. Members of the seed alignment include corrinoid proteins specific to four different, mutally non-homologous enzymes of the genus Methanosarcina. Three of the four cognate enzymes (trimethylamine, dimethylamine, and monomethylamine methyltransferases) all have the unusual, ribosomally incorporated amino acid pyrrolysine at the active site. All act in systems in which a methyl group is transferred to the corrinoid protein to create methylcobalamin, from which the methyl group is later transferred elsewhere.
Probab=40.77 E-value=2.2e+02 Score=23.94 Aligned_cols=91 Identities=20% Similarity=0.214 Sum_probs=0.0
Q ss_pred CCCcEEEEccch--HHHHhhHHHHHHHHHcCcEEE-EcCCCCHHHHHHHHHhcCceeeec----------chHHHHHHHc
Q 014952 225 HKEDVILCVLPL--FHIYSLNSVLLCALRVGAAIL-IMQKFDIVKLMELVQKYKVTVAPF----------VPPIVLAVAK 291 (415)
Q Consensus 225 ~~~~~~~~~~pl--~~~~g~~~~~l~~l~~G~~~v-~~~~~~~~~~~~~l~~~~~t~l~~----------~p~~l~~l~~ 291 (415)
....+++..++. .|..|........-..|-.++ +.....++.+.+.+++++++++.. ....+..+-+
T Consensus 82 ~~~~~vv~~t~~gd~H~lG~~~v~~~l~~~G~~vi~LG~~vp~e~~v~~~~~~~pd~v~lS~~~~~~~~~~~~~i~~l~~ 161 (197)
T TIGR02370 82 EVLGKVVCGVAEGDVHDIGKNIVVTMLRANGFDVIDLGRDVPIDTVVEKVKKEKPLMLTGSALMTTTMYGQKDINDKLKE 161 (197)
T ss_pred CCCCeEEEEeCCCchhHHHHHHHHHHHHhCCcEEEECCCCCCHHHHHHHHHHcCCCEEEEccccccCHHHHHHHHHHHHH
Q ss_pred CCCCCCCCcccceeeeecCCCCCHHHHHHH
Q 014952 292 SGDVDKYDMSSIRTVMSGAAPMGKELEDAV 321 (415)
Q Consensus 292 ~~~~~~~~l~~lr~v~~gG~~l~~~~~~~~ 321 (415)
....... .++.||.+++++..+.+
T Consensus 162 ~~~~~~v------~i~vGG~~~~~~~~~~~ 185 (197)
T TIGR02370 162 EGYRDSV------KFMVGGAPVTQDWADKI 185 (197)
T ss_pred cCCCCCC------EEEEEChhcCHHHHHHh
No 276
>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase. This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.
Probab=40.72 E-value=3.1e+02 Score=25.67 Aligned_cols=63 Identities=24% Similarity=0.198 Sum_probs=39.1
Q ss_pred HHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHHhCCeEeecCCC-----CCHHHHHHHHHh---cCceEEE
Q 014952 64 KVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGATSTTANPF-----YTPPEIAKQAIA---SKAKIII 129 (415)
Q Consensus 64 ~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~-----~~~~~~~~~l~~---~~~~~vl 129 (415)
.+...+...++++||.|.+-.+. +....-++...|+.++.++.+ .+.+.+...+.. -+.++|+
T Consensus 56 al~~~l~al~~~~Gd~Viv~~~~---~~~~~~~~~~~G~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~t~~v~ 126 (380)
T TIGR03588 56 ALHIACLALGVGPGDRVWTTPIT---FVATANCALYCGAKVDFVDIDPDTGNIDEDALEKKLAAAKGKLPKAIV 126 (380)
T ss_pred HHHHHHHHcCCCCCCEEEeCCcc---hHHHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHHhhcccCCCceEEE
Confidence 34444555578899987766553 344456667789888776542 356777777753 3455555
No 277
>PRK07786 long-chain-fatty-acid--CoA ligase; Validated
Probab=40.63 E-value=1.1e+02 Score=30.34 Aligned_cols=83 Identities=16% Similarity=0.065 Sum_probs=60.7
Q ss_pred eechHHHHHHHhhhhcCCCCCccCCCCcEEEEccchHHHHhhHHHHHHHHHcCcEEEEcCC-CCHHHHHHHHHhcCceee
Q 014952 201 MLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIMQK-FDIVKLMELVQKYKVTVA 279 (415)
Q Consensus 201 ~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~l~~l~~G~~~v~~~~-~~~~~~~~~l~~~~~t~l 279 (415)
.+|...+...+..+...+. ..++.+++++...++-...+ ...+++++..|+..+..+. .....+...+++.++..+
T Consensus 42 ~~ty~~l~~~~~~~a~~L~-~~g~~~g~~V~i~~~~~~~~--~~~~~a~~~~G~~~vpl~~~~~~~~~~~~l~~~~~~~i 118 (542)
T PRK07786 42 TTTWRELDDRVAALAGALS-RRGVGFGDRVLILMLNRTEF--VESVLAANMLGAIAVPVNFRLTPPEIAFLVSDCGAHVV 118 (542)
T ss_pred cccHHHHHHHHHHHHHHHH-HcCCCCCCEEEEECCCCHHH--HHHHHHHHHcCeEEEEcCccCCHHHHHHHHHhCCCcEE
Confidence 5788888776666555332 33577888888887755433 3358899999999988764 577888999999999988
Q ss_pred ecchHHH
Q 014952 280 PFVPPIV 286 (415)
Q Consensus 280 ~~~p~~l 286 (415)
+..+...
T Consensus 119 i~~~~~~ 125 (542)
T PRK07786 119 VTEAALA 125 (542)
T ss_pred EEccchH
Confidence 7766544
No 278
>cd02070 corrinoid_protein_B12-BD B12 binding domain of corrinoid proteins. A family of small methanogenic corrinoid proteins that bind methyl-Co(III) 5-hydroxybenzimidazolylcobamide as a cofactor. They play a role on the methanogenesis from trimethylamine, dimethylamine or monomethylamine, which is initiated by a series of corrinoid-dependent methyltransferases.
Probab=40.51 E-value=2.2e+02 Score=23.94 Aligned_cols=87 Identities=17% Similarity=0.199 Sum_probs=50.2
Q ss_pred cEEEEccc-hHHHHhhHHHHHHHHHcCcEEEEc-CCCCHHHHHHHHHhcCceeeecchHH------HHHHHcCCCCCCCC
Q 014952 228 DVILCVLP-LFHIYSLNSVLLCALRVGAAILIM-QKFDIVKLMELVQKYKVTVAPFVPPI------VLAVAKSGDVDKYD 299 (415)
Q Consensus 228 ~~~~~~~p-l~~~~g~~~~~l~~l~~G~~~v~~-~~~~~~~~~~~l~~~~~t~l~~~p~~------l~~l~~~~~~~~~~ 299 (415)
..++...| =.|..|........-..|-.++.. ....++.+.+.+.+++++++...-.. +..+++..+....
T Consensus 84 ~vl~~~~~gd~H~lG~~~v~~~l~~~G~~vi~lG~~~p~~~l~~~~~~~~~d~v~lS~~~~~~~~~~~~~i~~lr~~~~- 162 (201)
T cd02070 84 KVVIGTVEGDIHDIGKNLVATMLEANGFEVIDLGRDVPPEEFVEAVKEHKPDILGLSALMTTTMGGMKEVIEALKEAGL- 162 (201)
T ss_pred eEEEEecCCccchHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEeccccccHHHHHHHHHHHHHCCC-
Confidence 33444444 267777664334444678887755 45688999999999999987654321 2222222211110
Q ss_pred cccceeeeecCCCCCHH
Q 014952 300 MSSIRTVMSGAAPMGKE 316 (415)
Q Consensus 300 l~~lr~v~~gG~~l~~~ 316 (415)
...+ .++.||..++.+
T Consensus 163 ~~~~-~i~vGG~~~~~~ 178 (201)
T cd02070 163 RDKV-KVMVGGAPVNQE 178 (201)
T ss_pred CcCC-eEEEECCcCCHH
Confidence 1123 367788888865
No 279
>PRK09545 znuA high-affinity zinc transporter periplasmic component; Reviewed
Probab=40.44 E-value=2.1e+02 Score=26.09 Aligned_cols=75 Identities=19% Similarity=0.326 Sum_probs=47.2
Q ss_pred CEEEEEcCCchhHHHHHHHHHHhCCeEeecCCCC--CHH---HHHHHHHhcCceEEEEcccchHH-HHhhhhhcCceEEE
Q 014952 78 DVIMLLLQNCPQFVFAFLGASYIGATSTTANPFY--TPP---EIAKQAIASKAKIIITQAVYNDK-VRDLSEHHGARIVT 151 (415)
Q Consensus 78 ~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~--~~~---~~~~~l~~~~~~~vl~~~~~~~~-~~~~~~~~~~~~i~ 151 (415)
++..+...+...++.--+++-..|.. -+.+.. ++. ++...+.+.++++||++.....+ .+.+.+..+.+++.
T Consensus 203 ~~~~i~~H~af~Yf~~~ygl~~~~~~--~~~~~~eps~~~l~~l~~~ik~~~v~~If~e~~~~~~~~~~la~e~g~~v~~ 280 (311)
T PRK09545 203 GKGYFVFHDAYGYFEKHYGLTPLGHF--TVNPEIQPGAQRLHEIRTQLVEQKATCVFAEPQFRPAVIESVAKGTSVRMGT 280 (311)
T ss_pred CCcEEEECchHHHHHHhCCCceeeee--ccCCCCCCCHHHHHHHHHHHHHcCCCEEEecCCCChHHHHHHHHhcCCeEEE
Confidence 34566788888888888877766532 233332 333 45566667899999998765543 44555556666666
Q ss_pred eCC
Q 014952 152 IDP 154 (415)
Q Consensus 152 ~~~ 154 (415)
++.
T Consensus 281 ldp 283 (311)
T PRK09545 281 LDP 283 (311)
T ss_pred ecc
Confidence 553
No 280
>COG2236 Predicted phosphoribosyltransferases [General function prediction only]
Probab=40.33 E-value=51 Score=27.65 Aligned_cols=34 Identities=9% Similarity=0.192 Sum_probs=28.8
Q ss_pred CeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEc
Q 014952 51 DVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLL 84 (415)
Q Consensus 51 ~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~ 84 (415)
.-+||.++++.+.++|..+.+.|.+|.-.|++.-
T Consensus 5 ~~vSw~~I~~~~~~lA~kI~~s~~~PDvIiaiaR 38 (192)
T COG2236 5 LYVSWEEIHRLCRALAEKIRASGFKPDVIVAIAR 38 (192)
T ss_pred EEecHHHHHHHHHHHHHHHHHcCCCCCEEEEEcC
Confidence 4689999999999999999999998876555543
No 281
>PRK08180 feruloyl-CoA synthase; Reviewed
Probab=40.22 E-value=80 Score=31.99 Aligned_cols=97 Identities=16% Similarity=0.088 Sum_probs=68.0
Q ss_pred CCCCeEEEecCCCCCCCCceeeechHHHHHHHhhhhcCCCCCccCCCCcEEEEccchHHHHhhHHHHHHHHHcCcEEEEc
Q 014952 180 NPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIM 259 (415)
Q Consensus 180 ~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~l~~l~~G~~~v~~ 259 (415)
.++.++++.. +..| ....+|...+...+......+. ..++.+++++...++-+.-+-. .+++++..|+.++.+
T Consensus 52 ~p~~~a~~~~--~~~~--~~~~~Ty~el~~~v~~~A~~L~-~~Gv~~gd~Vai~~~n~~e~~~--~~lA~~~~Gav~vpl 124 (614)
T PRK08180 52 APDRVFLAER--GADG--GWRRLTYAEALERVRAIAQALL-DRGLSAERPLMILSGNSIEHAL--LALAAMYAGVPYAPV 124 (614)
T ss_pred CCCCceeeec--cCCC--ceeEeeHHHHHHHHHHHHHHHH-HcCCCCCCEEEEecCCCHHHHH--HHHHHHHcCCeEeee
Confidence 4566666543 1112 2356799988877766666443 3467889999988877654333 578999999999988
Q ss_pred CC-CC-----HHHHHHHHHhcCceeeecch
Q 014952 260 QK-FD-----IVKLMELVQKYKVTVAPFVP 283 (415)
Q Consensus 260 ~~-~~-----~~~~~~~l~~~~~t~l~~~p 283 (415)
++ .. +..+...+++.++.+++...
T Consensus 125 ~~~~~~~~~~~~~l~~~l~~~~~~~li~~~ 154 (614)
T PRK08180 125 SPAYSLVSQDFGKLRHVLELLTPGLVFADD 154 (614)
T ss_pred ccccccccCCHHHHHHHHhcCCCcEEEEcC
Confidence 65 33 67888899999998888753
No 282
>PF02350 Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; InterPro: IPR003331 UDP-N-acetylglucosamine 2-epimerase 5.1.3.14 from EC catalyses the production of UDP-ManNAc from UDP-GlcNAc. Some of the enzymes is this family are bifunctional. In microorganisms the epimerase is involved in in the synthesis of the capsule precursor UDP-ManNAcA [, ]. The protein from rat liver displays both epimerase and kinase activity [].; GO: 0008761 UDP-N-acetylglucosamine 2-epimerase activity, 0006047 UDP-N-acetylglucosamine metabolic process, 0009103 lipopolysaccharide biosynthetic process; PDB: 1V4V_B 3BEO_B 3DZC_B 3OT5_B 1O6C_B 1VGV_D 1F6D_C.
Probab=40.20 E-value=2.7e+02 Score=25.90 Aligned_cols=95 Identities=13% Similarity=0.045 Sum_probs=58.2
Q ss_pred HHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHHhCCeEeecCCC---------CCHHHHHHHHHhcCc
Q 014952 55 YADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGATSTTANPF---------YTPPEIAKQAIASKA 125 (415)
Q Consensus 55 y~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~---------~~~~~~~~~l~~~~~ 125 (415)
-.++......++..|.+. +-|.|.++. ++.+.+++.+|+.+.+..++-+... .+.+..++.+.+..-
T Consensus 49 ~~~~~~~~~~~~~~~~~~---~Pd~Vlv~G-D~~~~la~alaA~~~~ipv~HieaGlRs~d~~~g~~de~~R~~i~~la~ 124 (346)
T PF02350_consen 49 AKSTGLAIIELADVLERE---KPDAVLVLG-DRNEALAAALAAFYLNIPVAHIEAGLRSGDRTEGMPDEINRHAIDKLAH 124 (346)
T ss_dssp HHHHHHHHHHHHHHHHHH---T-SEEEEET-TSHHHHHHHHHHHHTT-EEEEES-----S-TTSSTTHHHHHHHHHHH-S
T ss_pred HHHHHHHHHHHHHHHHhc---CCCEEEEEc-CCchHHHHHHHHHHhCCCEEEecCCCCccccCCCCchhhhhhhhhhhhh
Confidence 367777788888888886 346565555 5778889999999999999988655 555666666666655
Q ss_pred eEEEEcccchHHHHhhhhhcCceEEEeCC
Q 014952 126 KIIITQAVYNDKVRDLSEHHGARIVTIDP 154 (415)
Q Consensus 126 ~~vl~~~~~~~~~~~~~~~~~~~~i~~~~ 154 (415)
-....++...+.+... .....+++++++
T Consensus 125 lhf~~t~~~~~~L~~~-G~~~~rI~~vG~ 152 (346)
T PF02350_consen 125 LHFAPTEEARERLLQE-GEPPERIFVVGN 152 (346)
T ss_dssp EEEESSHHHHHHHHHT-T--GGGEEE---
T ss_pred hhccCCHHHHHHHHhc-CCCCCeEEEECh
Confidence 5555555555555443 222356776653
No 283
>TIGR02618 tyr_phenol_ly tyrosine phenol-lyase. This model describes a group of tyrosine phenol-lyase (4.1.99.2) (beta-tyrosinase), a pyridoxal-phosphate enzyme closely related to tryptophanase (4.1.99.1) (see model TIGR02617). Both belong to the beta-eliminating lyase family (pfam01212)
Probab=40.16 E-value=3.6e+02 Score=26.20 Aligned_cols=68 Identities=18% Similarity=0.134 Sum_probs=44.4
Q ss_pred CeeeHHHHHHHHHHH--------------H-HHHHHcCCCCCCEEEEEcCCchhHHHHHHH-HHHhCCeEeec--C----
Q 014952 51 DVYTYADVELTSRKV--------------A-AGLSKLGVQKGDVIMLLLQNCPQFVFAFLG-ASYIGATSTTA--N---- 108 (415)
Q Consensus 51 ~~~Ty~el~~~~~~~--------------a-~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA-~~~~G~~~v~l--~---- 108 (415)
..-||.+|.+.+..+ | +.+...++++||.| + +..++.+..+ +...|++++=+ +
T Consensus 69 g~~s~~~lE~~va~~~G~~~av~v~sGT~Al~ll~~l~l~pGDeV----p-sn~~f~Tt~ahIe~~Gav~vDi~~dea~~ 143 (450)
T TIGR02618 69 GSRNFYHLERTVRELYGFKYVVPTHQGRGAENLLSQIAIKPGDYV----P-GNMYFTTTRYHQEKNGATFVDIIIDEAHD 143 (450)
T ss_pred CCCcHHHHHHHHHHHHCCCeEEEcCCHHHHHHHHHHhCCCCcCEE----C-CceeHHHHHHHHHhCCeEEEeeecccccc
Confidence 455888888876544 3 33445689999976 3 3455555665 67788866655 2
Q ss_pred --------CCCCHHHHHHHHHhc
Q 014952 109 --------PFYTPPEIAKQAIAS 123 (415)
Q Consensus 109 --------~~~~~~~~~~~l~~~ 123 (415)
.+.+.+.+...+...
T Consensus 144 ~~~~~p~~GniD~~~Le~aI~~~ 166 (450)
T TIGR02618 144 AQLNIPFKGNVDLKKLQKLIDEV 166 (450)
T ss_pred cccCCCCCCCcCHHHHHHHhccc
Confidence 234678888888753
No 284
>cd06448 L-Ser-dehyd Serine dehydratase is a pyridoxal phosphate (PLP)-dependent enzyme which catalyzes the conversion of L- , D-serine, or L-threonine to pyruvate/ketobutyrate and ammonia.
Probab=40.15 E-value=1.5e+02 Score=27.09 Aligned_cols=91 Identities=12% Similarity=0.025 Sum_probs=59.2
Q ss_pred CCcEEEeCCCCCeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHHhCCeEeecCCCCCHHHHHHH
Q 014952 40 DRPCIINGPTGDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGATSTTANPFYTPPEIAKQ 119 (415)
Q Consensus 40 ~~~a~~~~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~ 119 (415)
.++.+-.+..+-.-|+++- .....+.... +.|..+++.|..... +-.-....++|.+.|..++.+-|...++.....
T Consensus 16 ~~i~~K~E~~nptGS~K~R-~a~~~l~~a~-~~g~~~~~~vv~aSs-GN~g~alA~~a~~~G~~~~iv~p~~~~~~k~~~ 92 (316)
T cd06448 16 CNVFLKLENLQPSGSFKIR-GIGHLCQKSA-KQGLNECVHVVCSSG-GNAGLAAAYAARKLGVPCTIVVPESTKPRVVEK 92 (316)
T ss_pred CeEEEEeccCCCcCChHHH-HHHHHHHHHH-HhhcccCCeEEEeCC-cHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHH
Confidence 3455555433445556642 2222333333 334344666655554 555666678888999999888888788888999
Q ss_pred HHhcCceEEEEccc
Q 014952 120 AIASKAKIIITQAV 133 (415)
Q Consensus 120 l~~~~~~~vl~~~~ 133 (415)
++..++++++++..
T Consensus 93 l~~~GA~v~~~~~~ 106 (316)
T cd06448 93 LRDEGATVVVHGKV 106 (316)
T ss_pred HHHcCCEEEEECCc
Confidence 99999999998765
No 285
>PF10102 DUF2341: Domain of unknown function (DUF2341); InterPro: IPR018765 This domain of unknown function is found in various bacterial proteins, including MotA/TolQ/ExbB proton channels and other transport proteins.
Probab=39.93 E-value=51 Score=23.69 Aligned_cols=41 Identities=20% Similarity=0.263 Sum_probs=27.7
Q ss_pred CCeEEEEeCCCCCCCC--------CCCceeEEEecCccc------cccccCCccee
Q 014952 367 NAEMKIVDPDTGISLP--------RNQAGEICIRGAQIM------KGTYHIYAPFL 408 (415)
Q Consensus 367 ~~~v~i~d~~~~~~~~--------~g~~Gel~v~~~~~~------~gY~~~~~~~~ 408 (415)
+-++|+.| +++.+++ .++...||||-|.+- .=||+|+.+..
T Consensus 3 g~DIRf~d-~~~~~L~ywIE~wd~~~~~A~iWVkvp~i~~~~~~i~lyyGn~~a~~ 57 (89)
T PF10102_consen 3 GSDIRFYD-SDGTPLPYWIESWDPTNEQALIWVKVPSIPAGSTTIYLYYGNPSATS 57 (89)
T ss_pred CccEEEEe-CCCCEeEEEEEECCCCCCeEEEEEECCCCCCCCcEEEEEECCCCCcc
Confidence 45677777 5566653 456799999988543 46888776654
No 286
>PRK07868 acyl-CoA synthetase; Validated
Probab=39.65 E-value=1.7e+02 Score=31.76 Aligned_cols=97 Identities=18% Similarity=0.102 Sum_probs=68.9
Q ss_pred CCCCCeEEEecCCCCCCCCceeeechHHHHHHHhhhhcCCCCCccCCCCcEEEEccchHHHHhhHHHHHHHHHcCcEEEE
Q 014952 179 INPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILI 258 (415)
Q Consensus 179 ~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~l~~l~~G~~~v~ 258 (415)
..++.+|++. . +..+|...+...+..+...+. ..+..+++++..+++-.-.+-. .+++++..|+..+.
T Consensus 459 ~~pd~~Al~~-~--------~~~lTY~eL~~ra~rlA~~L~-~~Gv~~Gd~VaI~~~n~~e~v~--a~lA~~~aGav~vp 526 (994)
T PRK07868 459 DAPKGEFLLF-D--------GRVHTYEAVNRRINNVVRGLI-AVGVRQGDRVGVLMETRPSALV--AIAALSRLGAVAVL 526 (994)
T ss_pred HCCCCeEEEe-C--------CceeeHHHHHHHHHHHHHHHH-HcCCCCCCEEEEEcCCCHHHHH--HHHHHHhcCCEEEE
Confidence 3566677653 1 125789988887777666443 4567889999888876553333 57899999999999
Q ss_pred cCCCCHHHHHHHHHhcCceeeecchHHHHHH
Q 014952 259 MQKFDIVKLMELVQKYKVTVAPFVPPIVLAV 289 (415)
Q Consensus 259 ~~~~~~~~~~~~l~~~~~t~l~~~p~~l~~l 289 (415)
+++. ..+...++..++.+++..+..+..+
T Consensus 527 l~p~--~~l~~il~~s~~~~li~~~~~~~~~ 555 (994)
T PRK07868 527 MPPD--TDLAAAVRLGGVTEIITDPTNLEAA 555 (994)
T ss_pred eCCc--hhHHHHHhccCCeEEEEChHHHHHH
Confidence 8753 5677788888999888876655443
No 287
>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional
Probab=39.29 E-value=3.3e+02 Score=25.62 Aligned_cols=61 Identities=25% Similarity=0.297 Sum_probs=36.1
Q ss_pred HHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHHhCCeEeecCCC-----CCHHHHHHHHHhcCceEEE
Q 014952 65 VAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGATSTTANPF-----YTPPEIAKQAIASKAKIII 129 (415)
Q Consensus 65 ~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~-----~~~~~~~~~l~~~~~~~vl 129 (415)
+...|...++++||.|.+-.+ .+.....++...|+.++.++-+ .+.+.+...+.. +.++|+
T Consensus 61 l~lal~al~~~~Gd~Viv~~~---~~~~~~~~~~~~G~~~v~vd~~~~~~~~d~~~l~~~i~~-~tkav~ 126 (379)
T PRK11658 61 MHITLMALGIGPGDEVITPSL---TWVSTLNMIVLLGATPVMVDVDRDTLMVTPEAIEAAITP-RTKAII 126 (379)
T ss_pred HHHHHHHcCCCCCCEEEECCC---cHHHHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHhccc-CCeEEE
Confidence 334455567788998776544 3344445666788888776532 345666666543 445554
No 288
>PRK04813 D-alanine--poly(phosphoribitol) ligase subunit 1; Provisional
Probab=39.23 E-value=84 Score=30.59 Aligned_cols=80 Identities=14% Similarity=0.069 Sum_probs=58.5
Q ss_pred eechHHHHHHHhhhhcCCCCCccCCCCcEEEEccchHHHHhhHHHHHHHHHcCcEEEEcCC-CCHHHHHHHHHhcCceee
Q 014952 201 MLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIMQK-FDIVKLMELVQKYKVTVA 279 (415)
Q Consensus 201 ~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~l~~l~~G~~~v~~~~-~~~~~~~~~l~~~~~t~l 279 (415)
.+|...+...+..+...+. ..+..+++++....+-... +...+++++..|+..+.++. ...+.+...++..++.++
T Consensus 27 ~~t~~~l~~~~~~~a~~l~-~~g~~~~~~v~~~~~~~~~--~~~~~~a~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 103 (503)
T PRK04813 27 KLTYGQLKEDSDALAAFID-SLKLPDKSPIIVFGHMSPE--MLATFLGAVKAGHAYIPVDVSSPAERIEMIIEVAKPSLI 103 (503)
T ss_pred EEeHHHHHHHHHHHHHHHH-HhCCCCCCEEEEEcCCCHH--HHHHHHHHHHcCCEEecCCCCChHHHHHHHHHhcCCCEE
Confidence 4788888777666655443 3456778998888875543 33357899999999888765 566778888899888888
Q ss_pred ecch
Q 014952 280 PFVP 283 (415)
Q Consensus 280 ~~~p 283 (415)
+...
T Consensus 104 ~~~~ 107 (503)
T PRK04813 104 IATE 107 (503)
T ss_pred Eecc
Confidence 7654
No 289
>cd00640 Trp-synth-beta_II Tryptophan synthase beta superfamily (fold type II); this family of pyridoxal phosphate (PLP)-dependent enzymes catalyzes beta-replacement and beta-elimination reactions. This CD corresponds to aminocyclopropane-1-carboxylate deaminase (ACCD), tryptophan synthase beta chain (Trp-synth_B), cystathionine beta-synthase (CBS), O-acetylserine sulfhydrylase (CS), serine dehydratase (Ser-dehyd), threonine dehydratase (Thr-dehyd), diaminopropionate ammonia lyase (DAL), and threonine synthase (Thr-synth). ACCD catalyzes the conversion of 1-aminocyclopropane-1-carboxylate to alpha-ketobutyrate and ammonia. Tryptophan synthase folds into a tetramer, where the beta chain is the catalytic PLP-binding subunit and catalyzes the formation of L-tryptophan from indole and L-serine. CBS is a tetrameric hemeprotein that catalyzes condensation of serine and homocysteine to cystathionine. CS is a homodimer that catalyzes the formation of L-cysteine from O-acetyl-L-serine. Ser-dehy
Probab=39.18 E-value=2.6e+02 Score=24.26 Aligned_cols=93 Identities=14% Similarity=0.060 Sum_probs=57.1
Q ss_pred CCcEEEeCCCCCeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHHhCCeEeecCCCCCHHHHHHH
Q 014952 40 DRPCIINGPTGDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGATSTTANPFYTPPEIAKQ 119 (415)
Q Consensus 40 ~~~a~~~~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~ 119 (415)
.++.+-.++.+..-++++.. +..+...+.+.|..+++.|... ..+-.-....++|...|..+..+-|...+......
T Consensus 15 ~~l~~K~e~~~ptgS~K~R~--a~~~l~~a~~~g~~~~~~vv~~-ssGN~g~alA~~a~~~g~~~~v~~p~~~~~~~~~~ 91 (244)
T cd00640 15 ANIYLKLEFLNPTGSFKDRG--ALNLILLAEEEGKLPKGVIIES-TGGNTGIALAAAAARLGLKCTIVMPEGASPEKVAQ 91 (244)
T ss_pred CEEEEEecccCCcCCcHHHH--HHHHHHHHHHcCCCCCCEEEEe-CCcHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHH
Confidence 34555444333344554332 2222223334443245555444 44555666677777899888888887777888888
Q ss_pred HHhcCceEEEEcccch
Q 014952 120 AIASKAKIIITQAVYN 135 (415)
Q Consensus 120 l~~~~~~~vl~~~~~~ 135 (415)
++..+++++.++....
T Consensus 92 ~~~~Ga~v~~~~~~~~ 107 (244)
T cd00640 92 MRALGAEVVLVPGDFD 107 (244)
T ss_pred HHHCCCEEEEECCCHH
Confidence 9999999999987643
No 290
>PRK12483 threonine dehydratase; Reviewed
Probab=38.80 E-value=3.6e+02 Score=26.80 Aligned_cols=92 Identities=13% Similarity=0.141 Sum_probs=57.7
Q ss_pred cEEEeCCCCCeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHHhCCeEeecCCCCCHHHHHHHHH
Q 014952 42 PCIINGPTGDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGATSTTANPFYTPPEIAKQAI 121 (415)
Q Consensus 42 ~a~~~~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~ 121 (415)
+.+-.++.+.+-||+. +-..+.+.....+. .++| .+....+-......++|..+|..+..+-|...+......++
T Consensus 54 IylK~E~lqptGSfK~-RGA~n~i~~l~~~~-~~~G---VV~aSaGNha~gvA~aA~~lGi~~~IvmP~~tp~~Kv~~~r 128 (521)
T PRK12483 54 VLLKREDLQPVFSFKI-RGAYNKMARLPAEQ-LARG---VITASAGNHAQGVALAAARLGVKAVIVMPRTTPQLKVDGVR 128 (521)
T ss_pred EEEEEcCCCCCCchHH-HHHHHHHHHhHHHH-hcCc---EEEECCCHHHHHHHHHHHHhCCCEEEEECCCCCHHHHHHHH
Confidence 4444433334446643 33334444432222 2334 34445555666777889999999888888878888888999
Q ss_pred hcCceEEEEcccchHHH
Q 014952 122 ASKAKIIITQAVYNDKV 138 (415)
Q Consensus 122 ~~~~~~vl~~~~~~~~~ 138 (415)
..+++++++.....+..
T Consensus 129 ~~GAeVil~g~~~d~a~ 145 (521)
T PRK12483 129 AHGGEVVLHGESFPDAL 145 (521)
T ss_pred HCCCEEEEECCCHHHHH
Confidence 99999999986654443
No 291
>PLN02550 threonine dehydratase
Probab=38.76 E-value=4.3e+02 Score=26.75 Aligned_cols=91 Identities=16% Similarity=0.153 Sum_probs=57.0
Q ss_pred CcEEEeCCCCCeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHHhCCeEeecCCCCCHHHHHHHH
Q 014952 41 RPCIINGPTGDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGATSTTANPFYTPPEIAKQA 120 (415)
Q Consensus 41 ~~a~~~~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l 120 (415)
++.+-.++-+.+-||+. +-..+++.+.-.+ ..++| .|. ...+-......++|.++|..+..+-|...+......+
T Consensus 125 ~IylK~E~lqptGSFK~-RGA~n~I~~L~~e-~~~~G-VV~--aSaGNhAqgvA~aA~~lGika~IvmP~~tp~~Kv~~~ 199 (591)
T PLN02550 125 KVLLKREDLQPVFSFKL-RGAYNMMAKLPKE-QLDKG-VIC--SSAGNHAQGVALSAQRLGCDAVIAMPVTTPEIKWQSV 199 (591)
T ss_pred EEEEEEcCCCCCCcHHH-HHHHHHHHHHHHh-cCCCC-EEE--ECCCHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHH
Confidence 44444443334445655 2333333332222 34455 333 4555556666778999999888888887777778888
Q ss_pred HhcCceEEEEcccchH
Q 014952 121 IASKAKIIITQAVYND 136 (415)
Q Consensus 121 ~~~~~~~vl~~~~~~~ 136 (415)
+..+++++++.....+
T Consensus 200 r~~GAeVvl~g~~~de 215 (591)
T PLN02550 200 ERLGATVVLVGDSYDE 215 (591)
T ss_pred HHcCCEEEEeCCCHHH
Confidence 9999999999865443
No 292
>PRK11761 cysM cysteine synthase B; Provisional
Probab=38.67 E-value=3e+02 Score=24.89 Aligned_cols=89 Identities=13% Similarity=0.028 Sum_probs=60.6
Q ss_pred CcEEEeCCCCCeeeHHHHHHHHHHHHHHHHHcC-CCCCCEEEEEcCCchhHHHHHHHHHHhCCeEeecCCCCCHHHHHHH
Q 014952 41 RPCIINGPTGDVYTYADVELTSRKVAAGLSKLG-VQKGDVIMLLLQNCPQFVFAFLGASYIGATSTTANPFYTPPEIAKQ 119 (415)
Q Consensus 41 ~~a~~~~~~~~~~Ty~el~~~~~~~a~~L~~~g-~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~ 119 (415)
++.+-.+..+.+-||+. +.+..+...+.+.| +.+|+.|... ..+-.-....++|...|..+..+-|...++.....
T Consensus 28 ~i~~K~E~~nptGS~K~--R~a~~~~~~a~~~g~~~~g~~vv~a-SsGN~g~alA~~a~~~G~~~~i~~p~~~~~~k~~~ 104 (296)
T PRK11761 28 TILAKLEGNNPAGSVKD--RPALSMIVQAEKRGEIKPGDTLIEA-TSGNTGIALAMIAAIKGYRMKLIMPENMSQERRAA 104 (296)
T ss_pred EEEEEEcccCCCCCchh--HHHHHHHHHHHHcCCCCCCCEEEEe-CCChHHHHHHHHHHHcCCCEEEEECCCCCHHHHHH
Confidence 45555554445556665 22333333444555 4677766554 44555666677888899988888888777888899
Q ss_pred HHhcCceEEEEcc
Q 014952 120 AIASKAKIIITQA 132 (415)
Q Consensus 120 l~~~~~~~vl~~~ 132 (415)
++..++++++++.
T Consensus 105 ~~~~GA~v~~~~~ 117 (296)
T PRK11761 105 MRAYGAELILVPK 117 (296)
T ss_pred HHHcCCEEEEeCC
Confidence 9999999999986
No 293
>COG1587 HemD Uroporphyrinogen-III synthase [Coenzyme metabolism]
Probab=38.66 E-value=2e+02 Score=25.10 Aligned_cols=72 Identities=10% Similarity=0.070 Sum_probs=46.5
Q ss_pred CCCEEEEEcCCchhHHHHHHHHHHhCCeEeecCCCCCHHHHHHHHHhcC----ceEEEEcccchHHHHhhhhhcCceEEE
Q 014952 76 KGDVIMLLLQNCPQFVFAFLGASYIGATSTTANPFYTPPEIAKQAIASK----AKIIITQAVYNDKVRDLSEHHGARIVT 151 (415)
Q Consensus 76 ~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~----~~~vl~~~~~~~~~~~~~~~~~~~~i~ 151 (415)
++..++.+++.+.+ ++.+.|..+..++++.+.+.+...+.... ..+++.+....+.+.+.....+..+..
T Consensus 78 ~~~~i~aVG~~Ta~------~l~~~G~~~~~~p~~~~~~~l~~~l~~~~~~~~~vl~~~~~~~r~~l~~~L~~~G~~v~~ 151 (248)
T COG1587 78 KNKKIAAVGEKTAE------ALRKLGIKVDFIPEDGDSEGLLEELPELLKGGKRVLILRGNGGREVLEEKLEERGAEVRE 151 (248)
T ss_pred ccCeEEEEcHHHHH------HHHHhCCCCCcCCCccchHHHHHHhhhhccCCCeEEEEcCCCchHHHHHHHHhCCCEEEE
Confidence 46678888876644 55678888888877777777777766653 334445555555666666665655554
Q ss_pred eC
Q 014952 152 ID 153 (415)
Q Consensus 152 ~~ 153 (415)
++
T Consensus 152 ~~ 153 (248)
T COG1587 152 VE 153 (248)
T ss_pred Ee
Confidence 43
No 294
>PRK10595 SOS cell division inhibitor; Provisional
Probab=38.51 E-value=1.5e+02 Score=24.09 Aligned_cols=53 Identities=25% Similarity=0.053 Sum_probs=35.0
Q ss_pred HHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHHhCCeEe--ecCC-CCCHHHHHH
Q 014952 66 AAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGATST--TANP-FYTPPEIAK 118 (415)
Q Consensus 66 a~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v--~l~~-~~~~~~~~~ 118 (415)
+.+|.+.|+..+..+.|.-.+..+.+-+.-=+++.|..-+ ..-| ..+.+++++
T Consensus 70 ~~~L~~~Gl~l~rvl~v~~~~~~d~Lwa~EqaLrsG~~~aVL~Wlp~~l~~~~~RR 125 (164)
T PRK10595 70 REWLQASGLPLTKVMQLSQLSPCHTVEAMERALRTGNYSVVLGWLPDELTEEEHAR 125 (164)
T ss_pred HHHHHHcCCCcccEEEEecCCcHHHHHHHHHHHhhCCCcEEEECCcccCCHHHHHH
Confidence 4677888888777676767777788777788888885333 3324 555554443
No 295
>PRK13237 tyrosine phenol-lyase; Provisional
Probab=37.79 E-value=3.9e+02 Score=26.01 Aligned_cols=68 Identities=10% Similarity=0.068 Sum_probs=42.7
Q ss_pred CeeeHHHHHHHHHHH--------------HHH-HHHcCCCCCCEEEEEcCCchhHHHHHHH-HHHhCCeEe---------
Q 014952 51 DVYTYADVELTSRKV--------------AAG-LSKLGVQKGDVIMLLLQNCPQFVFAFLG-ASYIGATST--------- 105 (415)
Q Consensus 51 ~~~Ty~el~~~~~~~--------------a~~-L~~~g~~~g~~V~i~~~~~~~~~~~~lA-~~~~G~~~v--------- 105 (415)
..-||.+|.+.+..+ |.. +...++++||.| + +..++.+.-| +...|++++
T Consensus 76 gd~s~~~LE~~vAe~lG~e~aV~v~sGTaAl~ll~~l~v~pGd~V----p-~n~~f~Tt~ahI~~~Ga~fvDi~~d~a~~ 150 (460)
T PRK13237 76 GSRNFYHLEETVQEYYGFKHVVPTHQGRGAENLLSRIAIKPGQYV----P-GNMYFTTTRYHQELNGGIFVDIIIDEAHD 150 (460)
T ss_pred CCCcHHHHHHHHHHHHCCCeEEEeCCHHHHHHHHHHhCCCCcCEE----C-CccchHhhHHHHHhCCcEEEeeecccccc
Confidence 345777887776544 333 334689999964 3 3334444444 777888766
Q ss_pred -----ecCCCCCHHHHHHHHHhc
Q 014952 106 -----TANPFYTPPEIAKQAIAS 123 (415)
Q Consensus 106 -----~l~~~~~~~~~~~~l~~~ 123 (415)
|...+.+.+.+...+...
T Consensus 151 ~~~~~p~tgnlD~d~Le~~I~~~ 173 (460)
T PRK13237 151 AQSDHPFKGNVDLDKLQALIDEV 173 (460)
T ss_pred cccCCCCCCCcCHHHHHHHhccc
Confidence 334456778888888754
No 296
>PRK14057 epimerase; Provisional
Probab=37.58 E-value=2.9e+02 Score=24.41 Aligned_cols=64 Identities=11% Similarity=-0.008 Sum_probs=47.3
Q ss_pred HHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHHhCC----------eEeecCCCCCHHHHHHHHHhcCceEEEEc
Q 014952 65 VAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGA----------TSTTANPFYTPPEIAKQAIASKAKIIITQ 131 (415)
Q Consensus 65 ~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~----------~~v~l~~~~~~~~~~~~l~~~~~~~vl~~ 131 (415)
+...+.+.| .|.|.+..+.+.+..-++--+...|+ +-+-++|..+.+.+..++...+..++.+-
T Consensus 90 ~i~~~~~aG---ad~It~H~Ea~~~~~~~l~~Ir~~G~k~~~~~~~~kaGlAlnP~Tp~e~i~~~l~~vD~VLvMtV 163 (254)
T PRK14057 90 AAQACVKAG---AHCITLQAEGDIHLHHTLSWLGQQTVPVIGGEMPVIRGISLCPATPLDVIIPILSDVEVIQLLAV 163 (254)
T ss_pred HHHHHHHhC---CCEEEEeeccccCHHHHHHHHHHcCCCcccccccceeEEEECCCCCHHHHHHHHHhCCEEEEEEE
Confidence 334455554 56899999977665555666777775 67889999999999999988877776654
No 297
>PF09153 DUF1938: Domain of unknown function (DUF1938); InterPro: IPR015236 This domain, which is predominantly found in the archaeal protein O6-alkylguanine-DNA alkyltransferase, adopts a secondary structure consisting of a three stranded antiparallel beta-sheet and three alpha helices. The exact function has not, as yet, been defined, though it has been postulated that this domain may confer thermostability to the protein []. ; GO: 0005737 cytoplasm; PDB: 1MGT_A.
Probab=37.48 E-value=62 Score=22.71 Aligned_cols=32 Identities=16% Similarity=0.046 Sum_probs=18.8
Q ss_pred eeeHHHHHH-HHHHHHHHHHHcCCCCCCEEEEEcCCc
Q 014952 52 VYTYADVEL-TSRKVAAGLSKLGVQKGDVIMLLLQNC 87 (415)
Q Consensus 52 ~~Ty~el~~-~~~~~a~~L~~~g~~~g~~V~i~~~~~ 87 (415)
+++-.|+.+ ++.+++..|.++|++ |-+--.+|
T Consensus 30 slDg~efl~eri~~L~~~L~kRgv~----v~L~~~~S 62 (86)
T PF09153_consen 30 SLDGEEFLRERISRLIEFLKKRGVS----VSLDEEPS 62 (86)
T ss_dssp ESSHHHHHH-HHHHHHHHHHHTT----------B---
T ss_pred EeccHHHHHHHHHHHHHHHHhcCce----eEEeecCC
Confidence 344578887 999999999998765 55554444
No 298
>PF11974 MG1: Alpha-2-macroglobulin MG1 domain; InterPro: IPR021868 This is the N-terminal MG1 domain from alpha-2-macroglobulin [].
Probab=37.25 E-value=53 Score=24.01 Aligned_cols=35 Identities=23% Similarity=0.343 Sum_probs=24.0
Q ss_pred cccccccCCeEEEEeCCCCCCCCCC---CceeEEEecC
Q 014952 360 ACGTVVRNAEMKIVDPDTGISLPRN---QAGEICIRGA 394 (415)
Q Consensus 360 ~~G~p~~~~~v~i~d~~~~~~~~~g---~~Gel~v~~~ 394 (415)
..|+|++|++|++.|...++++..+ ..|...+...
T Consensus 23 ~tg~Pv~ga~V~l~~~~~~~~l~~g~TD~~G~a~~~~~ 60 (97)
T PF11974_consen 23 STGKPVAGAEVELYDSRNGQVLASGKTDADGFASFDST 60 (97)
T ss_pred CCCCccCCCEEEEEECCCCcEeeeeeeCCCceEEecCC
Confidence 5699999999999993336665433 3466665554
No 299
>COG2519 GCD14 tRNA(1-methyladenosine) methyltransferase and related methyltransferases [Translation, ribosomal structure and biogenesis]
Probab=36.98 E-value=1.6e+02 Score=25.84 Aligned_cols=73 Identities=22% Similarity=0.201 Sum_probs=50.6
Q ss_pred CCeeeHHHHHHHHHHHHHHHHHcCCCC-----------------CCEEEEEcCCchhHHHHHHHHHHhCCeEeecCCCCC
Q 014952 50 GDVYTYADVELTSRKVAAGLSKLGVQK-----------------GDVIMLLLQNCPQFVFAFLGASYIGATSTTANPFYT 112 (415)
Q Consensus 50 ~~~~Ty~el~~~~~~~a~~L~~~g~~~-----------------g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~ 112 (415)
++.+||..=.+.++..-..|.+.|+.. =|.|.+-+|+.++.+-.+.-.++.|+.++...|.
T Consensus 120 G~v~tyE~r~d~~k~A~~Nl~~~~l~d~v~~~~~Dv~~~~~~~~vDav~LDmp~PW~~le~~~~~Lkpgg~~~~y~P~-- 197 (256)
T COG2519 120 GHVTTYEIREDFAKTARENLSEFGLGDRVTLKLGDVREGIDEEDVDAVFLDLPDPWNVLEHVSDALKPGGVVVVYSPT-- 197 (256)
T ss_pred ceEEEEEecHHHHHHHHHHHHHhccccceEEEeccccccccccccCEEEEcCCChHHHHHHHHHHhCCCcEEEEEcCC--
Confidence 456777655555555555566655443 2578888899999999999999999888888874
Q ss_pred HHHHHHHHHhcC
Q 014952 113 PPEIAKQAIASK 124 (415)
Q Consensus 113 ~~~~~~~l~~~~ 124 (415)
.+++.+.++..+
T Consensus 198 veQv~kt~~~l~ 209 (256)
T COG2519 198 VEQVEKTVEALR 209 (256)
T ss_pred HHHHHHHHHHHH
Confidence 456555555444
No 300
>PLN02356 phosphateglycerate kinase
Probab=36.97 E-value=2.8e+02 Score=26.67 Aligned_cols=62 Identities=15% Similarity=-0.035 Sum_probs=46.0
Q ss_pred HHHcCC-CCCCEEEEEcCCchhHHHHHHHHHHhCCeEeecCCCCCHHHHHHHHHhcCceEEEEc
Q 014952 69 LSKLGV-QKGDVIMLLLQNCPQFVFAFLGASYIGATSTTANPFYTPPEIAKQAIASKAKIIITQ 131 (415)
Q Consensus 69 L~~~g~-~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~vl~~ 131 (415)
+.+.|. +++..|. .....-.-+...++|...|.-+..+-|...+.+....++..++++++++
T Consensus 95 a~~~g~~~~~g~Vv-eaSSGN~g~alA~~aa~~G~~~~ivvP~~~s~~K~~~ir~~GAeVi~v~ 157 (423)
T PLN02356 95 ALESGQLFPGGVVT-EGSAGSTAISLATVAPAYGCKCHVVIPDDVAIEKSQILEALGATVERVR 157 (423)
T ss_pred HHhCCccCCCCEEE-EeCCHHHHHHHHHHHHHcCCcEEEEECCCCcHHHHHHHHHcCCEEEEEC
Confidence 334444 3676555 3344445777778888899988888888778888899999999999985
No 301
>KOG0025 consensus Zn2+-binding dehydrogenase (nuclear receptor binding factor-1) [Transcription; Energy production and conversion]
Probab=36.95 E-value=2.3e+02 Score=25.68 Aligned_cols=64 Identities=20% Similarity=0.107 Sum_probs=49.2
Q ss_pred CCCCCCEEEEEcCCchhHHHHHHHHHHhCCeEee-cCCCCCHHHHHHHHHhcCceEEEEcccchH
Q 014952 73 GVQKGDVIMLLLQNCPQFVFAFLGASYIGATSTT-ANPFYTPPEIAKQAIASKAKIIITQAVYND 136 (415)
Q Consensus 73 g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~-l~~~~~~~~~~~~l~~~~~~~vl~~~~~~~ 136 (415)
.+++||.|.=-..||.---+.+-=|...|.--+- +......+++...|.+.+++.||++++..+
T Consensus 157 ~L~~GD~vIQNganS~VG~~ViQlaka~GiktinvVRdR~~ieel~~~Lk~lGA~~ViTeeel~~ 221 (354)
T KOG0025|consen 157 QLNKGDSVIQNGANSGVGQAVIQLAKALGIKTINVVRDRPNIEELKKQLKSLGATEVITEEELRD 221 (354)
T ss_pred hcCCCCeeeecCcccHHHHHHHHHHHHhCcceEEEeecCccHHHHHHHHHHcCCceEecHHHhcc
Confidence 5689999998888886655555556667765544 444556799999999999999999988664
No 302
>PRK10696 tRNA 2-thiocytidine biosynthesis protein TtcA; Provisional
Probab=36.77 E-value=3e+02 Score=24.28 Aligned_cols=78 Identities=9% Similarity=0.107 Sum_probs=47.1
Q ss_pred eHHHHHH-HHHHHHHHHHHcC-CCCCCEEEEEcCCchhHHHHHHHHHHh------C--CeEeecCCCC---CHHHHHHHH
Q 014952 54 TYADVEL-TSRKVAAGLSKLG-VQKGDVIMLLLQNCPQFVFAFLGASYI------G--ATSTTANPFY---TPPEIAKQA 120 (415)
Q Consensus 54 Ty~el~~-~~~~~a~~L~~~g-~~~g~~V~i~~~~~~~~~~~~lA~~~~------G--~~~v~l~~~~---~~~~~~~~l 120 (415)
++..+.+ ..+++.+.+.+.+ +.+|++|+|..+-+.|+++.+..+... | ..++.++... ..+.+..+.
T Consensus 4 ~~~~~~~~~~~~v~~~i~~~~li~~~~kilVa~SGG~DS~~LL~ll~~l~~~~~~~~~l~av~vd~g~~~~~~~~~~~~~ 83 (258)
T PRK10696 4 EFNKLQKRLRRQVGQAIADFNMIEEGDRVMVCLSGGKDSYTLLDILLNLQKRAPINFELVAVNLDQKQPGFPEHVLPEYL 83 (258)
T ss_pred chhHHHHHHHHHHHHHHHHcCCCCCCCEEEEEecCCHHHHHHHHHHHHHHHhCCCCeEEEEEEecCCCCCCCHHHHHHHH
Confidence 3344444 3445555666644 578999999999999999887777543 2 2444555432 233345555
Q ss_pred HhcCceEEEEc
Q 014952 121 IASKAKIIITQ 131 (415)
Q Consensus 121 ~~~~~~~vl~~ 131 (415)
+..+..+.+.+
T Consensus 84 ~~lgI~~~v~~ 94 (258)
T PRK10696 84 ESLGVPYHIEE 94 (258)
T ss_pred HHhCCCEEEEE
Confidence 66666655543
No 303
>PRK06382 threonine dehydratase; Provisional
Probab=36.50 E-value=2.7e+02 Score=26.54 Aligned_cols=92 Identities=17% Similarity=0.130 Sum_probs=56.0
Q ss_pred CCcEEEeCCCCCeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHHhCCeEeecCCCCCHHHHHHH
Q 014952 40 DRPCIINGPTGDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGATSTTANPFYTPPEIAKQ 119 (415)
Q Consensus 40 ~~~a~~~~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~ 119 (415)
.++.+-.+..+.+=||+.--. ...+. .+.+.+.++| | +....+-....+.++|...|..+..+-|...+......
T Consensus 40 ~~v~~K~E~~nptGSfK~Rga-~~~i~-~~~~~~~~~g--v-v~aSsGN~g~a~A~aa~~~G~~~~ivmp~~~~~~k~~~ 114 (406)
T PRK06382 40 GDIYFKLENFQKTGSFKSRGA-VFKFS-KLSEDELRNG--V-ITASAGNHAQGVAYAASINGIDAKIVMPEYTIPQKVNA 114 (406)
T ss_pred CEEEEEecCCCCCCCCHHHHH-HHHHH-hcchhccCCe--E-EEECCCHHHHHHHHHHHHcCCCEEEEEcCCCHHHHHHH
Confidence 345555543344445544322 12222 2323233344 3 33344445555678888999988888888787788888
Q ss_pred HHhcCceEEEEcccchH
Q 014952 120 AIASKAKIIITQAVYND 136 (415)
Q Consensus 120 l~~~~~~~vl~~~~~~~ 136 (415)
++..+++++++.....+
T Consensus 115 ~~~~GA~Vv~~~~~~~~ 131 (406)
T PRK06382 115 VEAYGAHVILTGRDYDE 131 (406)
T ss_pred HHHcCCEEEEECCCHHH
Confidence 99999999998875443
No 304
>TIGR03531 selenium_SpcS O-phosphoseryl-tRNA(Sec) selenium transferase. In the archaea and eukaryotes, the conversion of the mischarged serine to selenocysteine (Sec) on its tRNA is accomplished in two steps. This enzyme, O-phosphoseryl-tRNA(Sec) selenium transferase, acts second, after a phosphophorylation step catalyzed by a homolog of the bacterial SelA protein.
Probab=36.43 E-value=4.1e+02 Score=25.80 Aligned_cols=44 Identities=9% Similarity=0.008 Sum_probs=29.9
Q ss_pred CCCEEEEEcCCchhHHHHHHHHHHhCCeEeecCC-------CCCHHHHHHHHHh
Q 014952 76 KGDVIMLLLQNCPQFVFAFLGASYIGATSTTANP-------FYTPPEIAKQAIA 122 (415)
Q Consensus 76 ~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~-------~~~~~~~~~~l~~ 122 (415)
+|+.|. +.++ .+..+.-|+..+|+.++.+++ ..+.+.+...+..
T Consensus 150 ~gd~VI-~p~~--th~S~~kAi~~~G~~pv~Vd~~~d~~~~~iD~e~Le~aIt~ 200 (444)
T TIGR03531 150 KAKYVI-WPRI--DQKSCIKAISTAGFEPRVIETVLDGDELTTDVEDIERAIEE 200 (444)
T ss_pred CCCEEE-EECc--ChHHHHHHHHHcCCeEEEeeeeecCcCCCcCHHHHHHHHHh
Confidence 466443 4443 377778888888988888873 2356777777765
No 305
>PTZ00297 pantothenate kinase; Provisional
Probab=36.36 E-value=2.1e+02 Score=32.59 Aligned_cols=101 Identities=16% Similarity=0.039 Sum_probs=74.0
Q ss_pred eeechHHHHHHHhhhhcCCCCCccCCCCcEEEEccchHHHHhhHHHHHHHHHcCcEEEEcCCCCHHHHHHHHHhcCceee
Q 014952 200 VMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIMQKFDIVKLMELVQKYKVTVA 279 (415)
Q Consensus 200 v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~l~~l~~G~~~v~~~~~~~~~~~~~l~~~~~t~l 279 (415)
..+|...+...+..+...+. .+++.++|++...++-..-.-. ..++++..|+..+.... +...+...+++.++.++
T Consensus 456 ~~lTY~El~~~V~~lAa~L~-~lGV~~GDrVaIls~N~~Ewvi--a~lA~~~~GaV~VPly~-t~~eL~yIL~~S~akvV 531 (1452)
T PTZ00297 456 EWLTYGTVDARARELGSGLL-ALGVRPGDVIGVDCEASRNIVI--LEVACALYGFTTLPLVG-KGSTMRTLIDEHKIKVV 531 (1452)
T ss_pred eEEEHHHHHHHHHHHHHHHH-HcCCCCCCEEEEEcCCCHHHHH--HHHHHHHcCCEEEeCCC-CHHHHHHHHHhcCCcEE
Confidence 35888888877776665554 5678999999888876543332 46888999999888753 56789999999999999
Q ss_pred ecchHHHHHHHcCCCCCCCCcccceeeeecC
Q 014952 280 PFVPPIVLAVAKSGDVDKYDMSSIRTVMSGA 310 (415)
Q Consensus 280 ~~~p~~l~~l~~~~~~~~~~l~~lr~v~~gG 310 (415)
++....+..+.+... +.||.+++-.
T Consensus 532 fv~~~~l~kl~~i~~------~~Lr~IIv~d 556 (1452)
T PTZ00297 532 FADRNSVAAILTCRS------RKLETVVYTH 556 (1452)
T ss_pred EEchhHHHHHHhhcc------cCCcEEEEEC
Confidence 998888777765321 2577776653
No 306
>TIGR03205 pimA dicarboxylate--CoA ligase PimA. PimA, a member of a large family of acyl-CoA ligases, is found in a characteristic operon pimFABCDE for the metabolism of pimelate and related compounds. It is found, so far, in Bradyrhizobium japonicum and several strains of Rhodopseudomonas palustris. PimA from R. palustris was shown to be active as a CoA ligase for C(7) to C(14) dicarboxylates and fatty acids.
Probab=36.31 E-value=1.2e+02 Score=30.08 Aligned_cols=80 Identities=11% Similarity=-0.022 Sum_probs=59.6
Q ss_pred eechHHHHHHHhhhhcCCCCCccCCCCcEEEEccchHHHHhhHHHHHHHHHcCcEEEEcCC-CCHHHHHHHHHhcCceee
Q 014952 201 MLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIMQK-FDIVKLMELVQKYKVTVA 279 (415)
Q Consensus 201 ~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~l~~l~~G~~~v~~~~-~~~~~~~~~l~~~~~t~l 279 (415)
.+|...+...+..+...+. ..++.+++++...++-...+-. .+++++..|+.++..++ .....+...++..++..+
T Consensus 46 ~~ty~el~~~~~~~a~~L~-~~gi~~g~~V~i~~~~~~~~~~--~~la~~~~G~~~v~l~~~~~~~~l~~~i~~~~~~~v 122 (541)
T TIGR03205 46 PITYTELEAMAETAAAALL-RAGYGKDASVALYLGNTPDHPI--NFFGALKAGARVVHLSPLDGERALSHKLSDSGARLL 122 (541)
T ss_pred EeeHHHHHHHHHHHHHHHH-HcCCCCCCEEEEECCCChHHHH--HHHHHHhcCeEEEecCCCCCHHHHHHHHhhcCceEE
Confidence 5788888776666555443 3467889999988886553333 47889999999988764 577889999999999998
Q ss_pred ecch
Q 014952 280 PFVP 283 (415)
Q Consensus 280 ~~~p 283 (415)
+...
T Consensus 123 i~~~ 126 (541)
T TIGR03205 123 ITSD 126 (541)
T ss_pred EEeC
Confidence 7653
No 307
>PRK10287 thiosulfate:cyanide sulfurtransferase; Provisional
Probab=36.07 E-value=1.5e+02 Score=21.88 Aligned_cols=49 Identities=18% Similarity=0.019 Sum_probs=34.8
Q ss_pred eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHHhCCeEeec
Q 014952 52 VYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGATSTTA 107 (415)
Q Consensus 52 ~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l 107 (415)
.+.+.++.+ .+.+.+..+++.|.++|.++.....+...+.+.|...+-+
T Consensus 42 niP~~~l~~-------~l~~l~~~~~~~IVlyC~~G~rS~~aa~~L~~~G~~~v~~ 90 (104)
T PRK10287 42 NIPLKEVKE-------RIATAVPDKNDTVKLYCNAGRQSGQAKEILSEMGYTHAEN 90 (104)
T ss_pred ECCHHHHHH-------HHHhcCCCCCCeEEEEeCCChHHHHHHHHHHHcCCCeEEe
Confidence 456665533 3445555667789999999888888888888899876543
No 308
>PF07210 DUF1416: Protein of unknown function (DUF1416); InterPro: IPR010814 This family consists of several hypothetical bacterial proteins of around 100 residues in length. Members of this family appear to be Actinomycete specific. The function of this family is unknown.
Probab=35.18 E-value=62 Score=22.78 Aligned_cols=38 Identities=16% Similarity=0.219 Sum_probs=24.7
Q ss_pred cccccccCCeEEEEeCCCCCCCCCCCceeEEEecCccccccccCC
Q 014952 360 ACGTVVRNAEMKIVDPDTGISLPRNQAGEICIRGAQIMKGTYHIY 404 (415)
Q Consensus 360 ~~G~p~~~~~v~i~d~~~~~~~~~g~~Gel~v~~~~~~~gY~~~~ 404 (415)
.-|.|+++..++++|.. |+- .+|+..+...-|+ ||..|
T Consensus 16 ~~G~Pv~gAyVRLLD~s-gEF-----taEvvts~~G~FR-Ffaap 53 (85)
T PF07210_consen 16 RDGEPVGGAYVRLLDSS-GEF-----TAEVVTSATGDFR-FFAAP 53 (85)
T ss_pred cCCcCCCCeEEEEEcCC-CCe-----EEEEEecCCccEE-EEeCC
Confidence 35889999999999943 321 5666666555554 34333
No 309
>TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase. This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds.
Probab=35.05 E-value=3.1e+02 Score=24.29 Aligned_cols=60 Identities=22% Similarity=0.268 Sum_probs=39.2
Q ss_pred HHHHcCCCCCCEEEEEcCCchhHHHHHHHHHHhCCe-EeecCCCCCHHHHHHHHHhcCceEEEEc
Q 014952 68 GLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGAT-STTANPFYTPPEIAKQAIASKAKIIITQ 131 (415)
Q Consensus 68 ~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~-~v~l~~~~~~~~~~~~l~~~~~~~vl~~ 131 (415)
.+.+.+..+|++|+|+..-.+-..++.+|- ..|+. ++.++. + ++...++.+.+++.++..
T Consensus 112 al~~~~~~~g~~VlV~G~G~vG~~~~~~ak-~~G~~~Vi~~~~--~-~~r~~~a~~~Ga~~~i~~ 172 (280)
T TIGR03366 112 ALEAAGDLKGRRVLVVGAGMLGLTAAAAAA-AAGAARVVAADP--S-PDRRELALSFGATALAEP 172 (280)
T ss_pred HHHhccCCCCCEEEEECCCHHHHHHHHHHH-HcCCCEEEEECC--C-HHHHHHHHHcCCcEecCc
Confidence 455566779999999987777777766665 45875 544432 2 333456677777766643
No 310
>cd07050 BMC_EutL_repeat2 ethanolamine utilization protein S (EutS), Bacterial Micro-Compartment (BMC) domain repeat 2. EutL proteins are homologs of the carboxysome shell protein. They are encoded within the eut operon and might be required for the formation of the outer shell of the bacterial eut polyhedral organelles which are involved in the cobalamin-dependent degradation of ethanolamine. Although it has been suggested that EutL might form hexamers and further assemble into the flat facets of the polyhedral outer shell of eut organelles at present no experimental evidence directly supports this view. EutL proteins contain two tandem BMC domains. This CD includes domain 2 (the second BMC domain of EutL).
Probab=34.86 E-value=96 Score=21.65 Aligned_cols=41 Identities=17% Similarity=0.250 Sum_probs=34.9
Q ss_pred HHHHHH-cCCCCCCEEEEEcCCchhHHHHHHHHHHhCCeEee
Q 014952 66 AAGLSK-LGVQKGDVIMLLLQNCPQFVFAFLGASYIGATSTT 106 (415)
Q Consensus 66 a~~L~~-~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~ 106 (415)
..+|.+ .|++.|+.++.+.....|.+..+=|.+++.-+-+.
T Consensus 3 GsYls~~agi~eGe~lAYLIapPlEa~y~lDaALKAAdV~~~ 44 (87)
T cd07050 3 GSYLSKTAGIAEGEALAYLIAPPLEAMYGLDAALKAADVELA 44 (87)
T ss_pred chhhHHhcCCCCCCeeeeeecCcHHHHHHHHHHHHhhceeeE
Confidence 456776 59999999999999999999999999999766543
No 311
>PRK15407 lipopolysaccharide biosynthesis protein RfbH; Provisional
Probab=34.73 E-value=3.6e+02 Score=26.05 Aligned_cols=54 Identities=13% Similarity=0.126 Sum_probs=32.1
Q ss_pred CCCCCCEEEEEcCCchhHHHHHHHHHHhCCeEeecCCC-----CCHHHHHHHHHhcCceEEEE
Q 014952 73 GVQKGDVIMLLLQNCPQFVFAFLGASYIGATSTTANPF-----YTPPEIAKQAIASKAKIIIT 130 (415)
Q Consensus 73 g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~-----~~~~~~~~~l~~~~~~~vl~ 130 (415)
++++||.|.+-.+. +.....++...|+.++.++.+ .+.+.+...+.. +.++|+.
T Consensus 107 ~~~pGd~VIv~~~t---~~a~~~~v~~~G~~pv~vdvd~~~~~id~~~le~~i~~-~tkaVi~ 165 (438)
T PRK15407 107 ALKPGDEVITVAAG---FPTTVNPIIQNGLVPVFVDVELPTYNIDASLLEAAVSP-KTKAIMI 165 (438)
T ss_pred CCCCCCEEEECCCC---cHHHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHHcCc-CCeEEEE
Confidence 77888877665443 344455666778887766543 245566665532 4455554
No 312
>PF00455 DeoRC: DeoR C terminal sensor domain; InterPro: IPR014036 The deoR-type HTH domain is a DNA-binding, helix-turn-helix (HTH) domain of about 50-60 amino acids present in transcription regulators of the deoR family, involved in sugar catabolism. This family of prokaryotic regulators is named after Escherichia coli deoR, a repressor of the deo operon, which encodes nucleotide and deoxyribonucleotide catabolic enzymes. DeoR also negatively regulates the expression of nupG and tsx, a nucleoside-specific transport protein and a channel-forming protein, respectively. DeoR-like transcription repressors occur in diverse bacteria as regulators of sugar and nucleoside metabolic systems. The effector molecules for deoR-like regulators are generally phosphorylated intermediates of the relevant metabolic pathway. The DNA-binding deoR-type HTH domain occurs usually in the N-terminal part. The C-terminal part can contain an effector-binding domain and/or an oligomerization domain. DeoR occurs as an octamer, whilst glpR and agaR are tetramers. Several operators may be bound simultaneously, which could facilitate DNA looping [, ].
Probab=34.24 E-value=2.1e+02 Score=23.10 Aligned_cols=88 Identities=17% Similarity=0.240 Sum_probs=60.1
Q ss_pred HHHHcCcEEEEcCCCCHHHHHHHHHhc-CceeeecchHHHHHHHcCCCCCCCCcccceeeeecCCC-------CCHHHHH
Q 014952 248 CALRVGAAILIMQKFDIVKLMELVQKY-KVTVAPFVPPIVLAVAKSGDVDKYDMSSIRTVMSGAAP-------MGKELED 319 (415)
Q Consensus 248 ~~l~~G~~~v~~~~~~~~~~~~~l~~~-~~t~l~~~p~~l~~l~~~~~~~~~~l~~lr~v~~gG~~-------l~~~~~~ 319 (415)
.-+..|.++.+-...+...+.+.|.+. ++|++--.......|.+. ++.+.++.||.. ..+...+
T Consensus 15 ~~I~~~~~Ifld~GtT~~~la~~L~~~~~ltVvTnsl~ia~~l~~~--------~~~~vi~~GG~~~~~~~~~~G~~a~~ 86 (161)
T PF00455_consen 15 SLIEDGDTIFLDSGTTTLELAKYLPDKKNLTVVTNSLPIANELSEN--------PNIEVILLGGEVNPKSLSFVGPIALE 86 (161)
T ss_pred HhCCCCCEEEEECchHHHHHHHHhhcCCceEEEECCHHHHHHHHhc--------CceEEEEeCCEEEcCCCcEECchHHH
Confidence 334556666665666778888888877 777777666677777654 367788888833 4556667
Q ss_pred HHHhhCCCCccccccccccCCccc
Q 014952 320 AVRAKLPHAKLGQGYGMTEAGPVL 343 (415)
Q Consensus 320 ~~~~~~~~~~~~~~YG~tE~~~~~ 343 (415)
.+++...+.-++..-|.++-.++.
T Consensus 87 ~l~~~~~d~afi~~~gi~~~~G~~ 110 (161)
T PF00455_consen 87 ALRQFRFDKAFIGADGISEEGGLT 110 (161)
T ss_pred HHHhhccceEEecccEecCCCccc
Confidence 777665577788888888755443
No 313
>COG4009 Uncharacterized protein conserved in archaea [Function unknown]
Probab=33.98 E-value=1.6e+02 Score=20.44 Aligned_cols=67 Identities=12% Similarity=0.141 Sum_probs=50.7
Q ss_pred CeeeHHHHHHHHHHHHH---HHHHcCCCCCCEEEEEcCCchhHHHHHHHHHHhCCeEeecCCCCCHHHHHHHHHhcCceE
Q 014952 51 DVYTYADVELTSRKVAA---GLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGATSTTANPFYTPPEIAKQAIASKAKI 127 (415)
Q Consensus 51 ~~~Ty~el~~~~~~~a~---~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~ 127 (415)
...||+||.+.-+.++. .|.+..++..|-++|+-=++... .-++.++...+.+++++.+.+.++++
T Consensus 8 gi~t~keL~eE~~~Fv~~kA~l~k~~L~dDde~aIfnI~gT~S-----------y~V~Fl~~~~s~eev~~ele~mga~i 76 (88)
T COG4009 8 GIATYKELDEELKDFVRLKAHLAKVDLNDDDELAIFNIEGTSS-----------YYVVFLEEVESEEEVERELEDMGAEI 76 (88)
T ss_pred hheeHHhhhHHHHHHHHHHHHhcccccCCCCcEEEEEecCcee-----------EEEEEEeccCCHHHHHHHHHHhCchh
Confidence 35799998887776654 46667888999999988776543 34567777788899999988888765
Q ss_pred E
Q 014952 128 I 128 (415)
Q Consensus 128 v 128 (415)
=
T Consensus 77 n 77 (88)
T COG4009 77 N 77 (88)
T ss_pred c
Confidence 3
No 314
>cd01562 Thr-dehyd Threonine dehydratase: The first step in amino acid degradation is the removal of nitrogen. Although the nitrogen atoms of most amino acids are transferred to alpha-ketoglutarate before removal, the alpha-amino group of threonine can be directly converted into NH4+. The direct deamination is catalyzed by threonine dehydratase, in which pyridoxal phosphate (PLP) is the prosthetic group. Threonine dehydratase is widely distributed in all three major phylogenetic divisions.
Probab=33.82 E-value=2.4e+02 Score=25.49 Aligned_cols=57 Identities=12% Similarity=0.116 Sum_probs=41.9
Q ss_pred CEEEEEcCCchhHHHHHHHHHHhCCeEeecCCCCCHHHHHHHHHhcCceEEEEcccch
Q 014952 78 DVIMLLLQNCPQFVFAFLGASYIGATSTTANPFYTPPEIAKQAIASKAKIIITQAVYN 135 (415)
Q Consensus 78 ~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~vl~~~~~~ 135 (415)
+.|... ..+-.-....++|.+.|.-++.+-|...+......++..++++++++.+..
T Consensus 66 ~~iv~~-ssGN~g~alA~~a~~~G~~~~ivvp~~~~~~k~~~l~~~Ga~vi~~~~~~~ 122 (304)
T cd01562 66 KGVVAA-SAGNHAQGVAYAAKLLGIPATIVMPETAPAAKVDATRAYGAEVVLYGEDFD 122 (304)
T ss_pred CcEEEE-CCCHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHcCCEEEEeCCCHH
Confidence 344444 445566666778888998887777776677778899999999999987533
No 315
>PRK09162 hypoxanthine-guanine phosphoribosyltransferase; Provisional
Probab=33.12 E-value=1.3e+02 Score=24.85 Aligned_cols=51 Identities=12% Similarity=0.085 Sum_probs=36.4
Q ss_pred CCeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHHhCC
Q 014952 50 GDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGA 102 (415)
Q Consensus 50 ~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~ 102 (415)
+.-+||.|+.+.+.++|..+.+. .+....+.+...++-..++..+|-. +|.
T Consensus 14 ~~~~s~~~i~~~i~~la~~i~~~-~~~~~~viV~i~~gg~~~A~~La~~-l~~ 64 (181)
T PRK09162 14 DCLVSAAEVEAAIDRMADEITAD-LADENPLVLCVMGGGLVFTGQLLPR-LDF 64 (181)
T ss_pred cEeecHHHHHHHHHHHHHHHHHH-cCCCCeEEEEECCCcHHHHHHHHHH-cCC
Confidence 56789999999999999999884 2222336666667767777666643 453
No 316
>cd01018 ZntC Metal binding protein ZntC. These proteins are predicted to function as initial receptors in ABC transport of metal ions. They belong to the TroA superfamily of helical backbone metal receptor proteins that share a distinct fold and ligand binding mechanism. They are comprised of two globular subdomains connected by a long alpha helix and bind their specific ligands in the cleft between these domains. In addition, many of these proteins possess a metal-binding histidine-rich motif (repetitive HDH sequence).
Probab=33.12 E-value=2.9e+02 Score=24.47 Aligned_cols=95 Identities=13% Similarity=0.200 Sum_probs=54.5
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHHhCCeEeecCCC--CCH---HHHHHHHHhcCceEEEE
Q 014952 56 ADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGATSTTANPF--YTP---PEIAKQAIASKAKIIIT 130 (415)
Q Consensus 56 ~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~--~~~---~~~~~~l~~~~~~~vl~ 130 (415)
+++.++.+.+...+++.--....+..+...+...++.-.+++-..+.. .+. .++ .++...+.+.+.++||+
T Consensus 148 ~~~~~~L~~l~~~~~~~~~~~~~~~~v~~H~af~Y~~~~ygl~~~~~~----~~~~eps~~~l~~l~~~ik~~~v~~if~ 223 (266)
T cd01018 148 DALLAELDALDSEIRTILSKLKQRAFMVYHPAWGYFARDYGLTQIPIE----EEGKEPSPADLKRLIDLAKEKGVRVVFV 223 (266)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCCeEEEECchhHHHHHHcCCEEEecC----CCCCCCCHHHHHHHHHHHHHcCCCEEEE
Confidence 333444444444444320111235667788888888777766655421 122 223 45666777889999999
Q ss_pred cccchH-HHHhhhhhcCceEEEeCC
Q 014952 131 QAVYND-KVRDLSEHHGARIVTIDP 154 (415)
Q Consensus 131 ~~~~~~-~~~~~~~~~~~~~i~~~~ 154 (415)
+..... .+..+.+..+.+++.++.
T Consensus 224 e~~~~~~~~~~la~~~g~~v~~ld~ 248 (266)
T cd01018 224 QPQFSTKSAEAIAREIGAKVVTIDP 248 (266)
T ss_pred cCCCCcHHHHHHHHHcCCeEEEeCC
Confidence 865443 444555667777777763
No 317
>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]
Probab=32.74 E-value=1.6e+02 Score=28.62 Aligned_cols=57 Identities=19% Similarity=0.226 Sum_probs=44.2
Q ss_pred CCCCcEEEEccchHHHHhhHHHHHHHHHcCcEEEEcC----CCCHHHHHHHHHhcCceeeecchHH
Q 014952 224 LHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIMQ----KFDIVKLMELVQKYKVTVAPFVPPI 285 (415)
Q Consensus 224 ~~~~~~~~~~~pl~~~~g~~~~~l~~l~~G~~~v~~~----~~~~~~~~~~l~~~~~t~l~~~p~~ 285 (415)
..++|+++.--|-++..-. ..-..|..++-++ ..+++.+.+.++++++..++++|++
T Consensus 176 ~~pGd~v~vE~PtY~~~~~-----~~~~~g~~~~~vp~d~~G~~~e~le~~~~~~~~k~~y~~P~~ 236 (459)
T COG1167 176 LDPGDTVLVEDPTYPGALQ-----ALEALGARVIPVPVDEDGIDPEALEEALAQWKPKAVYVTPTF 236 (459)
T ss_pred CCCCCEEEEcCCCcHHHHH-----HHHHcCCcEEecCCCCCCCCHHHHHHHHhhcCCcEEEECCCC
Confidence 4589999999998875322 2345577777765 3689999999999999999999965
No 318
>cd01448 TST_Repeat_1 Thiosulfate sulfurtransferase (TST), N-terminal, inactive domain. TST contains 2 copies of the Rhodanese Homology Domain; this is the 1st repeat, which does not contain the catalytically active Cys residue. The role of the 1st repeat is uncertain, but it is believed to be involved in protein interaction.
Probab=32.64 E-value=1.3e+02 Score=22.55 Aligned_cols=40 Identities=20% Similarity=0.257 Sum_probs=30.8
Q ss_pred HHHHHHHHcCCCCCCEEEEEcCC-chhHHHHHHHHHHhCCe
Q 014952 64 KVAAGLSKLGVQKGDVIMLLLQN-CPQFVFAFLGASYIGAT 103 (415)
Q Consensus 64 ~~a~~L~~~g~~~g~~V~i~~~~-~~~~~~~~lA~~~~G~~ 103 (415)
.+.+.+.+.|+.+++.|.++|.. +.....+.+.+...|..
T Consensus 66 ~~~~~~~~~~~~~~~~vv~~c~~g~~~a~~~~~~l~~~G~~ 106 (122)
T cd01448 66 EFAELLGSLGISNDDTVVVYDDGGGFFAARAWWTLRYFGHE 106 (122)
T ss_pred HHHHHHHHcCCCCCCEEEEECCCCCccHHHHHHHHHHcCCC
Confidence 45555667788889999999988 47777777778888865
No 319
>cd01563 Thr-synth_1 Threonine synthase is a pyridoxal phosphate (PLP) dependent enzyme that catalyses the last reaction in the synthesis of threonine from aspartate. It proceeds by converting O-phospho-L-homoserine (OPH) into threonine and inorganic phosphate. In plants, OPH is an intermediate between the methionine and threonine/isoleucine pathways. Thus threonine synthase competes for OPH with cystathionine-gamma-synthase, the first enzyme in the methionine pathway. These enzymes are in general dimers. Members of this CD, Thr-synth_1, are widely distributed in bacteria, archaea and higher plants.
Probab=32.12 E-value=2.1e+02 Score=26.26 Aligned_cols=91 Identities=12% Similarity=0.041 Sum_probs=55.0
Q ss_pred CCcEEEeCCCCCeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHHhCCeEeecCCCCCHHHHHHH
Q 014952 40 DRPCIINGPTGDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGATSTTANPFYTPPEIAKQ 119 (415)
Q Consensus 40 ~~~a~~~~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~ 119 (415)
.++.+-.+..+..=||++-. +..+...+.+.| ++.|.... .+-.-....+++...|..+..+-|...+......
T Consensus 38 ~~i~~K~E~~nptGS~K~R~--a~~~l~~a~~~g---~~~vv~~S-sGN~g~alA~~a~~~G~~~~ivvp~~~~~~k~~~ 111 (324)
T cd01563 38 KNLYVKDEGLNPTGSFKDRG--MTVAVSKAKELG---VKAVACAS-TGNTSASLAAYAARAGIKCVVFLPAGKALGKLAQ 111 (324)
T ss_pred CceEEEecCCCCcccHHHhh--HHHHHHHHHHcC---CCEEEEeC-CCHHHHHHHHHHHHcCCceEEEEeCCCCHHHHHH
Confidence 35555555444444554322 233333333444 44555543 3333444457888899888777776667777888
Q ss_pred HHhcCceEEEEcccchH
Q 014952 120 AIASKAKIIITQAVYND 136 (415)
Q Consensus 120 l~~~~~~~vl~~~~~~~ 136 (415)
++..++++++++....+
T Consensus 112 l~~~GA~Vi~~~~~~~~ 128 (324)
T cd01563 112 ALAYGATVLAVEGNFDD 128 (324)
T ss_pred HHHcCCEEEEECCcHHH
Confidence 99999999999875433
No 320
>PRK09224 threonine dehydratase; Reviewed
Probab=31.95 E-value=4e+02 Score=26.38 Aligned_cols=92 Identities=13% Similarity=0.185 Sum_probs=57.6
Q ss_pred CCcEEEeCCCCCeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHHhCCeEeecCCCCCHHHHHHH
Q 014952 40 DRPCIINGPTGDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGATSTTANPFYTPPEIAKQ 119 (415)
Q Consensus 40 ~~~a~~~~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~ 119 (415)
.++.+-.++....-||+. +-..+.+++ |.+...++| .+....+-......+++.++|..++.+-|...+......
T Consensus 35 ~~i~lK~E~lqptgSfK~-RgA~n~i~~-l~~~~~~~g---vV~aSaGNha~avA~aa~~lGi~~~IvmP~~tp~~K~~~ 109 (504)
T PRK09224 35 NQVLLKREDLQPVFSFKL-RGAYNKMAQ-LTEEQLARG---VITASAGNHAQGVALSAARLGIKAVIVMPVTTPDIKVDA 109 (504)
T ss_pred CEEEEEecCCCCCCCChH-HHHHHHHHh-hhHHhcCCE---EEEECcCHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHH
Confidence 455555554444556665 222333333 322111222 334445666667778899999988888787777777788
Q ss_pred HHhcCceEEEEcccchH
Q 014952 120 AIASKAKIIITQAVYND 136 (415)
Q Consensus 120 l~~~~~~~vl~~~~~~~ 136 (415)
++..+++++++.....+
T Consensus 110 ~r~~GA~Vi~~g~~~~~ 126 (504)
T PRK09224 110 VRAFGGEVVLHGDSFDE 126 (504)
T ss_pred HHhCCCEEEEECCCHHH
Confidence 99999999999765443
No 321
>cd04910 ACT_AK-Ectoine_1 ACT domains located C-terminal to the catalytic domain of the aspartokinase of the ectoine (1,4,5,6-tetrahydro-2-methyl pyrimidine-4-carboxylate) biosynthetic pathway. This CD includes the first of two ACT domains located C-terminal to the catalytic domain of the aspartokinase of the ectoine (1,4,5,6-tetrahydro-2-methyl pyrimidine-4-carboxylate) biosynthetic pathway found in Methylomicrobium alcaliphilum, Vibrio cholerae, and various other halotolerant or halophilic bacteria. Bacteria exposed to hyperosmotic stress accumulate organic solutes called 'compatible solutes' of which ectoine, a heterocyclic amino acid, is one. Apart from its osmotic function, ectoine also exhibits a protective effect on proteins, nucleic acids and membranes against a variety of stress factors. de novo synthesis of ectoine starts with the phosphorylation of L-aspartate and shares its first two enzymatic steps with the biosynthesis of amino acids of the aspartate family: aspartokinase
Probab=31.74 E-value=95 Score=21.21 Aligned_cols=51 Identities=22% Similarity=0.505 Sum_probs=37.3
Q ss_pred HHHHHHHHhcCceeeecchHHHHHHHcCCCCCCCCcccceeeeecCCCCCHHHHHHHHhhCCCCcc
Q 014952 265 VKLMELVQKYKVTVAPFVPPIVLAVAKSGDVDKYDMSSIRTVMSGAAPMGKELEDAVRAKLPHAKL 330 (415)
Q Consensus 265 ~~~~~~l~~~~~t~l~~~p~~l~~l~~~~~~~~~~l~~lr~v~~gG~~l~~~~~~~~~~~~~~~~~ 330 (415)
..+++.+.+++++++.- ..+-.++...+.+....-..+.+.+++.||+..+
T Consensus 19 ~~i~~~l~~~~v~ii~K---------------~~nANtit~yl~~~~k~~~r~~~~Le~~~p~a~i 69 (71)
T cd04910 19 LEILELLQRFKVSIIAK---------------DTNANTITHYLAGSLKTIKRLTEDLENRFPNAEI 69 (71)
T ss_pred HHHHHHHHHcCCeEEEE---------------ecCCCeEEEEEEcCHHHHHHHHHHHHHhCccCcc
Confidence 56888999999999852 2223567777777666667888888888887654
No 322
>PLN02409 serine--glyoxylate aminotransaminase
Probab=31.30 E-value=4.6e+02 Score=24.84 Aligned_cols=99 Identities=5% Similarity=-0.008 Sum_probs=50.5
Q ss_pred CCCCCCHHhHHHhhhccCCCCcEEEeCCCCCeeeHHHHHHHHHHHHHHHHHc-CCCCCCEEEEEcCCchhHHH-HHHHHH
Q 014952 21 IPNHLPLHTYCFENISQFADRPCIINGPTGDVYTYADVELTSRKVAAGLSKL-GVQKGDVIMLLLQNCPQFVF-AFLGAS 98 (415)
Q Consensus 21 ~~~~~tl~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~~a~~L~~~-g~~~g~~V~i~~~~~~~~~~-~~lA~~ 98 (415)
.|...++.+.+.+...+.. .. .+ -.++.+..+++...|.++ |.+.++.|.+ ..++...+. ++..++
T Consensus 14 ~pGP~~~~~~V~~a~~~~~-----~~---~~---~~~~~~~~~~~~~~l~~~~g~~~~~~vi~-~~~gt~a~~~a~~~~~ 81 (401)
T PLN02409 14 VPGPVNIPERVLRAMNRPN-----ED---HR---SPAFPALTKELLEDVKYIFKTKSGTPFIF-PTTGTGAWESALTNTL 81 (401)
T ss_pred cCCCCCCCHHHHHHhcCCC-----CC---CC---CHHHHHHHHHHHHHHHHHhCCCCCCEEEE-eCCcHHHHHHHHHhcC
Confidence 4445666666666654421 00 11 223444444444445442 5554444443 334444433 334455
Q ss_pred HhCCeEeecCCCCCHHHHHHHHHhcCceEEEEc
Q 014952 99 YIGATSTTANPFYTPPEIAKQAIASKAKIIITQ 131 (415)
Q Consensus 99 ~~G~~~v~l~~~~~~~~~~~~l~~~~~~~vl~~ 131 (415)
..|-.++..++..........++..+.+++...
T Consensus 82 ~~Gd~Vlv~~~~~~~~~~~~~~~~~g~~v~~v~ 114 (401)
T PLN02409 82 SPGDKVVSFRIGQFSLLWIDQMQRLNFDVDVVE 114 (401)
T ss_pred CCCCEEEEeCCCchhHHHHHHHHHcCCceEEEE
Confidence 567666666665555555566667777776664
No 323
>PRK05638 threonine synthase; Validated
Probab=31.30 E-value=2e+02 Score=27.78 Aligned_cols=92 Identities=15% Similarity=0.073 Sum_probs=56.7
Q ss_pred CcEEEeCCCCCeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHHhCCeEeecCCCCCHHHHHHHH
Q 014952 41 RPCIINGPTGDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGATSTTANPFYTPPEIAKQA 120 (415)
Q Consensus 41 ~~a~~~~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l 120 (415)
++.+-.+..+-+-||++-.. ..-+...+ +.| .+.|+. ...+-.-......+.++|..+..+-|...+......+
T Consensus 81 ~l~~K~E~~nPtGSfKdR~a-~~~i~~a~-~~g---~~~vv~-aSsGN~g~alA~~aa~~G~~~~i~vp~~~~~~k~~~~ 154 (442)
T PRK05638 81 NVYIKDETRNPTGSFRDRLA-TVAVSYGL-PYA---ANGFIV-ASDGNAAASVAAYSARAGKEAFVVVPRKVDKGKLIQM 154 (442)
T ss_pred eEEEEeCCCCCCCChHHHHH-HHHHHHHH-HcC---CCEEEE-eCCChHHHHHHHHHHHcCCCEEEEEeCCCCHHHHHHH
Confidence 45555554456677776322 22233333 333 334444 4444455555566678898887777776677778899
Q ss_pred HhcCceEEEEcccchHHH
Q 014952 121 IASKAKIIITQAVYNDKV 138 (415)
Q Consensus 121 ~~~~~~~vl~~~~~~~~~ 138 (415)
+..+++++.++....+..
T Consensus 155 ~~~GA~vi~v~~~~~~~~ 172 (442)
T PRK05638 155 IAFGAKIIRYGESVDEAI 172 (442)
T ss_pred HhcCcEEEEECCCHHHHH
Confidence 999999999976654443
No 324
>PRK08813 threonine dehydratase; Provisional
Probab=31.24 E-value=4.4e+02 Score=24.60 Aligned_cols=83 Identities=12% Similarity=0.031 Sum_probs=54.7
Q ss_pred CCeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHHhCCeEeecCCCCCHHHHHHHHHhcCceEEE
Q 014952 50 GDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGATSTTANPFYTPPEIAKQAIASKAKIII 129 (415)
Q Consensus 50 ~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~vl 129 (415)
+.+-||+.--.. ..+.+ +.+.|...+ .+....+-.-....++|..+|..+..+-|...+......++..++.++.
T Consensus 58 nptGSfK~RgA~-~~l~~-a~~~~~~~~---VV~aSsGN~G~alA~aa~~~Gi~~~IvvP~~~~~~K~~~i~~~GAeVv~ 132 (349)
T PRK08813 58 QRTGSYKVRGAL-NALLA-GLERGDERP---VICASAGNHAQGVAWSAYRLGVQAITVMPHGAPQTKIAGVAHWGATVRQ 132 (349)
T ss_pred CCcCCCHHHHHH-HHHHH-HHHcCCCCe---EEEECCCHHHHHHHHHHHHcCCCEEEEEcCCCCHHHHHHHHHcCCEEEE
Confidence 455666654333 22333 333343322 3455556667777788999998888777777777888888999999999
Q ss_pred EcccchHH
Q 014952 130 TQAVYNDK 137 (415)
Q Consensus 130 ~~~~~~~~ 137 (415)
+..+..+.
T Consensus 133 ~g~~~~~a 140 (349)
T PRK08813 133 HGNSYDEA 140 (349)
T ss_pred ECCCHHHH
Confidence 97654433
No 325
>cd06447 D-Ser-dehyd D-Serine dehydratase is a pyridoxal phosphate (PLP)-dependent enzyme which catalyzes the conversion of L- or D-serine to pyruvate and ammonia. D-serine dehydratase serves as a detoxifying enzyme in most E. coli strains where D-serine is a competitive antagonist of beta-alanine in the biosynthetic pathway to pentothenate and coenzyme A. D-serine dehydratase is different from other pyridoxal-5'-phosphate-dependent enzymes in that it catalyzes alpha, beta-elimination reactions on amino acids.
Probab=31.19 E-value=2.6e+02 Score=26.77 Aligned_cols=58 Identities=7% Similarity=-0.089 Sum_probs=46.3
Q ss_pred EEEEcCCchhHHHHHHHHHHhCCeEeecCCCCCHHHHHHHHHhcCceEEEEcccchHH
Q 014952 80 IMLLLQNCPQFVFAFLGASYIGATSTTANPFYTPPEIAKQAIASKAKIIITQAVYNDK 137 (415)
Q Consensus 80 V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~vl~~~~~~~~ 137 (415)
-.+....+-.-....+++...|..+..+-|...+......++..++++++++....+.
T Consensus 136 ~VV~aSsGN~G~alA~~a~~~G~~~~IvvP~~~~~~K~~~ira~GAeVv~v~~~~~~a 193 (404)
T cd06447 136 SIAVGSTGNLGLSIGIMAAALGFKVTVHMSADAKQWKKDKLRSKGVTVVEYETDYSKA 193 (404)
T ss_pred EEEEECccHHHHHHHHHHHHcCCCEEEEECCCCcHHHHHHHHHCCCEEEEECCCHHHH
Confidence 3455555666777788899999998888888888899999999999999998654443
No 326
>PF00291 PALP: Pyridoxal-phosphate dependent enzyme; InterPro: IPR001926 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. Pyridoxal-5'-phosphate-dependent enzymes (B6 enzymes) catalyze manifold reactions in the metabolism of amino acids. Most of these enzymes can be assigned to one of three different families of homologous proteins, the alpha, beta and gamma families. The alpha and gamma family might be distantly related with one another, but are clearly not homologous with the beta family. The beta family includes L- and D-serine dehydratase, threonine dehydratase, the beta subunit of tryptophan synthase, threonine synthase and cysteine synthase. These enzymes catalyze beta-replacement or beta-elimination reactions []. Comparison of sequences from eukaryotic, archebacterial, and eubacterial species indicates that the functional specialization of most B6 enzymes has occurred already in the universal ancestor cell. The cofactor pyridoxal-5-phosphate must have emerged very early in biological evolution; conceivably, organic cofactors and metal ions were the first biological catalysts []. The 3D structure of the beta-subunit of tryptophan synthase has been solved. The subunit has two domains that are approximately the same size and similar to each other in folding pattern. Each has a core containing a four-stranded parallel beta-sheet with three helices on its inner side and one on the outer side. The cofactor is bound at the interface between the domains [].; GO: 0003824 catalytic activity, 0030170 pyridoxal phosphate binding, 0008152 metabolic process; PDB: 1P5J_A 2D1F_B 3AEY_B 3AEX_B 3IAU_A 2Q3B_A 2Q3D_A 2Q3C_A 1TZJ_A 1RQX_D ....
Probab=31.17 E-value=3.1e+02 Score=24.60 Aligned_cols=56 Identities=21% Similarity=0.148 Sum_probs=43.7
Q ss_pred CCEEEEEcCCchhHHHHHHHHHHhCCeEeecCCCCCHHHHHHHHHhcCceEEEEccc
Q 014952 77 GDVIMLLLQNCPQFVFAFLGASYIGATSTTANPFYTPPEIAKQAIASKAKIIITQAV 133 (415)
Q Consensus 77 g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~vl~~~~ 133 (415)
++.| +....+-.-..+.++|...|..++.+-|...++.....++..+++++.+...
T Consensus 56 ~~~v-v~assGN~g~a~A~~a~~~g~~~~i~~p~~~~~~~~~~~~~~Ga~v~~~~~~ 111 (306)
T PF00291_consen 56 GRTV-VGASSGNHGRALAYAAARLGLKCTIVVPEDVSPEKLKQMRALGAEVILVPGD 111 (306)
T ss_dssp TSEE-EEESSSHHHHHHHHHHHHHTCEEEEEEETTSHHHHHHHHHHTTCEEEEESST
T ss_pred ccee-eeeccCCceehhhhhhhhccccceeeeccccccccccceeeecceEEEcccc
Confidence 4556 5566666777777888888988888878777778888999999999887654
No 327
>PRK08246 threonine dehydratase; Provisional
Probab=31.04 E-value=4.1e+02 Score=24.19 Aligned_cols=59 Identities=17% Similarity=0.176 Sum_probs=43.9
Q ss_pred CCCEEEEEcCCchhHHHHHHHHHHhCCeEeecCCCCCHHHHHHHHHhcCceEEEEcccch
Q 014952 76 KGDVIMLLLQNCPQFVFAFLGASYIGATSTTANPFYTPPEIAKQAIASKAKIIITQAVYN 135 (415)
Q Consensus 76 ~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~vl~~~~~~ 135 (415)
+++.|... ..+-.-..+.++|.++|..+..+-|...++.....++..++++++++....
T Consensus 67 ~~~~vv~a-SsGN~g~a~A~~a~~~G~~~~iv~p~~~~~~k~~~~~~~GA~V~~~~~~~~ 125 (310)
T PRK08246 67 PAAGVVAA-SGGNAGLAVAYAAAALGVPATVFVPETAPPAKVARLRALGAEVVVVGAEYA 125 (310)
T ss_pred cCCeEEEe-CCCHHHHHHHHHHHHcCCCEEEEECCCCcHHHHHHHHHCCCEEEEeCCCHH
Confidence 45555444 445566667778888998888777777777778899999999999986543
No 328
>PF06277 EutA: Ethanolamine utilisation protein EutA; InterPro: IPR009377 Proteins in this entry are EutA ethanolamine utilization proteins, reactivating factors for ethanolamine ammonia lyase, encoded by the ethanolamine utilization eut operon. The holoenzyme of adenosylcobalamin-dependent ethanolamine ammonia-lyase (EutBC, IPR0092462 from INTERPRO, IPR010628 from INTERPRO), which is part of the ethanolamine utilization pathway [, , ], undergoes suicidal inactivation during catalysis as well as inactivation in the absence of substrate. The inactivation involves the irreversible cleavage of the Co-C bond of the coenzyme. The inactivated holoenzyme undergoes rapid and continuous reactivation in the presence of ATP, Mg2+, and free adenosylcobalamin in permeabilised cells (in situ), homogenate, and cell extracts of Escherichia coli. The EutA protein is essential for reactivation. It was demonstrated with purified recombinant EutA that both the suicidally inactivated and O2-inactivated holoethanolamine ammonia lyase underwent rapid reactivation in vitro by EutA in the presence of adenosylcobalamin, ATP, and Mg2+ []. The inactive enzyme-cyanocobalamin complex was also activated in situ and in vitro by EutA under the same conditions. Thus EutA is believed to be the only component of the reactivating factor for ethanolamine ammonia lyase. Reactivation and activation occur through the exchange of modified coenzyme for free intact adenosylcobalamin []. Bacteria that harbor the ethanolamine utilization pathway can use ethanolamine as a source of carbon and nitrogen. For more information on the ethanolamine utilization pathway, please see IPR009194 from INTERPRO, IPR012408 from INTERPRO.
Probab=30.82 E-value=4.2e+02 Score=25.83 Aligned_cols=72 Identities=11% Similarity=0.146 Sum_probs=50.6
Q ss_pred CCHHhHHHhhhccC-----CCCcEEEeCCCCCeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHH
Q 014952 25 LPLHTYCFENISQF-----ADRPCIINGPTGDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGAS 98 (415)
Q Consensus 25 ~tl~~~l~~~a~~~-----p~~~a~~~~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~ 98 (415)
..+.+.+.+....+ -+..|+... .....+|+++.+.++.++..+.+. ++++....+++++...-++-+.--.
T Consensus 353 ~~l~~~i~~~l~~~~~~~~~~~~Alal~-g~~~~~f~~iq~lA~~i~~~~~~~-~~~~~Plivv~e~D~aKvLGq~l~~ 429 (473)
T PF06277_consen 353 EELAEAIREALEWFDLEGEDQPVALALP-GKPNPSFAEIQELAEAIAEGMAEL-INPDQPLIVVVEQDMAKVLGQTLQA 429 (473)
T ss_pred HHHHHHHHHHHHhhcccCCCCcEEEEeC-CCCCCCHHHHHHHHHHHHHHHHhh-ccCCCCEEEEECchHHHHHHHHHHH
Confidence 45666666654442 344555544 246899999999999999999985 6678788888888876665444333
No 329
>PRK10411 DNA-binding transcriptional activator FucR; Provisional
Probab=30.41 E-value=2.1e+02 Score=25.03 Aligned_cols=86 Identities=15% Similarity=0.162 Sum_probs=54.6
Q ss_pred HHcCcEEEEcCCCCHHHHHHHHHhcCceeeecchHHHHHHHcCCCCCCCCcccceeeeecCC-------CCCHHHHHHHH
Q 014952 250 LRVGAAILIMQKFDIVKLMELVQKYKVTVAPFVPPIVLAVAKSGDVDKYDMSSIRTVMSGAA-------PMGKELEDAVR 322 (415)
Q Consensus 250 l~~G~~~v~~~~~~~~~~~~~l~~~~~t~l~~~p~~l~~l~~~~~~~~~~l~~lr~v~~gG~-------~l~~~~~~~~~ 322 (415)
+.-|.++++-...+...+.+.|.....|++--.+.....|... ++++.++.||+ ...+...+.++
T Consensus 91 I~~gd~Ifld~GtT~~~l~~~L~~~~ltVvTNs~~ia~~l~~~--------~~~~vil~GG~~~~~~~~~~G~~a~~~l~ 162 (240)
T PRK10411 91 IEEGMVIALDASSTCWYLARQLPDINIQVFTNSHPICQELGKR--------ERIQLISSGGTLERKYGCYVNPSLISQLK 162 (240)
T ss_pred CCCCCEEEEcCcHHHHHHHHhhCCCCeEEEeCCHHHHHHHhcC--------CCCEEEEECCEEeCCCCceECHHHHHHHH
Confidence 3345545544444556667777655677766666666666543 45677888884 34566677777
Q ss_pred hhCCCCccccccccccCCccc
Q 014952 323 AKLPHAKLGQGYGMTEAGPVL 343 (415)
Q Consensus 323 ~~~~~~~~~~~YG~tE~~~~~ 343 (415)
+...+.-++..-|.++.+++.
T Consensus 163 ~~~~d~afis~~gi~~~~G~~ 183 (240)
T PRK10411 163 SLEIDLFIFSCEGIDSSGALW 183 (240)
T ss_pred hcCCCEEEEeceeECCCCCcc
Confidence 765577788888887655443
No 330
>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=30.37 E-value=5.1e+02 Score=25.04 Aligned_cols=27 Identities=15% Similarity=-0.034 Sum_probs=16.3
Q ss_pred HHHHHHHHhhCCCCccccccccccCCc
Q 014952 315 KELEDAVRAKLPHAKLGQGYGMTEAGP 341 (415)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~YG~tE~~~ 341 (415)
.+...+|.+.+.-..+-..+|-+|+..
T Consensus 350 ~~~~~~f~~~l~l~~~a~slGg~~Slv 376 (432)
T PRK06702 350 LEAAKEFIANVKLATLVTHVADARTCV 376 (432)
T ss_pred HHHHHHHHHhCccceeccccCCCCcce
Confidence 344556666654445566778777763
No 331
>PRK05851 long-chain-fatty-acid--[acyl-carrier-protein] ligase; Validated
Probab=30.27 E-value=5.1e+02 Score=25.46 Aligned_cols=90 Identities=20% Similarity=0.192 Sum_probs=58.8
Q ss_pred CCCCcEEEeCCCC-------CeeeHHHHHHHHHHHHHHHHHcCCC-CCCEEEEEcCCchh-HHHHHHHHHHhCCeEeecC
Q 014952 38 FADRPCIINGPTG-------DVYTYADVELTSRKVAAGLSKLGVQ-KGDVIMLLLQNCPQ-FVFAFLGASYIGATSTTAN 108 (415)
Q Consensus 38 ~p~~~a~~~~~~~-------~~~Ty~el~~~~~~~a~~L~~~g~~-~g~~V~i~~~~~~~-~~~~~lA~~~~G~~~v~l~ 108 (415)
.++.++++...++ ..+|++.+...+..++..+ ++. ++|++....|-.-. .+...++.+..|+..+..+
T Consensus 150 ~~~d~a~i~~TSGTTG~PKgV~~th~~~~~~~~~~~~~~---~~~~~~d~~l~~~pl~h~~g~~~~~~~l~~G~~~~~~~ 226 (525)
T PRK05851 150 DSGGPAVLQGTAGSTGTPRTAILSPGAVLSNLRGLNARV---GLDAATDVGCSWLPLYHDMGLAFLLTAALAGAPLWLAP 226 (525)
T ss_pred CCCCeEEEEeCCCCCCCCcEEEecHHHHHHHHHHHHHHh---CCCCCCCeEEEcCCCccCccHHHHHHHHHcCCeEEEcC
Confidence 4567777654333 4689998887766655443 666 78888877774322 2334667788898887655
Q ss_pred CC-C--CHHHHHHHHHhcCceEEEE
Q 014952 109 PF-Y--TPPEIAKQAIASKAKIIIT 130 (415)
Q Consensus 109 ~~-~--~~~~~~~~l~~~~~~~vl~ 130 (415)
.. . .+..+...+.+.++.++.+
T Consensus 227 ~~~~~~~~~~~~~~i~~~~~t~~~~ 251 (525)
T PRK05851 227 TTAFSASPFRWLSWLSDSRATLTAA 251 (525)
T ss_pred HHHHHHCHHHHHHHHHHhCCeEEeC
Confidence 31 1 3556778888888886644
No 332
>PRK02261 methylaspartate mutase subunit S; Provisional
Probab=30.06 E-value=2.7e+02 Score=21.80 Aligned_cols=46 Identities=13% Similarity=0.063 Sum_probs=38.9
Q ss_pred hhHHHHHHHHHHhCCeEeecCCCCCHHHHHHHHHhcCceEEEEccc
Q 014952 88 PQFVFAFLGASYIGATSTTANPFYTPPEIAKQAIASKAKIIITQAV 133 (415)
Q Consensus 88 ~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~vl~~~~ 133 (415)
....+....+...|.-++-+-.+.+.+++...+.+.++++|..+..
T Consensus 18 lG~~iv~~~lr~~G~eVi~LG~~vp~e~i~~~a~~~~~d~V~lS~~ 63 (137)
T PRK02261 18 VGNKILDRALTEAGFEVINLGVMTSQEEFIDAAIETDADAILVSSL 63 (137)
T ss_pred HHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEcCc
Confidence 4445556667788999999999999999999999999999998753
No 333
>cd02067 B12-binding B12 binding domain (B12-BD). This domain binds different cobalamid derivates, like B12 (adenosylcobamide) or methylcobalamin or methyl-Co(III) 5-hydroxybenzimidazolylcobamide, it is found in several enzymes, such as glutamate mutase, methionine synthase and methylmalonyl-CoA mutase. Cobalamin undergoes a conformational change on binding the protein; the dimethylbenzimidazole group, which is coordinated to the cobalt in the free cofactor, moves away from the corrin and is replaced by a histidine contributed by the protein. The sequence Asp-X-His-X-X-Gly, which contains this histidine ligand, is conserved in many cobalamin-binding proteins.
Probab=29.77 E-value=2.4e+02 Score=21.11 Aligned_cols=44 Identities=16% Similarity=0.008 Sum_probs=34.8
Q ss_pred HHHHHHHHHHhCCeEeecCCCCCHHHHHHHHHhcCceEEEEccc
Q 014952 90 FVFAFLGASYIGATSTTANPFYTPPEIAKQAIASKAKIIITQAV 133 (415)
Q Consensus 90 ~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~vl~~~~ 133 (415)
.......+...|.-++.+.+..+.+++...+.+.+|++|..+..
T Consensus 16 ~~~~~~~l~~~G~~V~~lg~~~~~~~l~~~~~~~~pdvV~iS~~ 59 (119)
T cd02067 16 KNIVARALRDAGFEVIDLGVDVPPEEIVEAAKEEDADAIGLSGL 59 (119)
T ss_pred HHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEecc
Confidence 33444455567999989999999999999999999999887643
No 334
>TIGR02981 phageshock_pspE phage shock operon rhodanese PspE. Members of this very narrowly defined protein family are proteins active as rhodanese (EC 2.8.1.1) and found in the extended variants of the phage shock protein (psp operon) in Escherichia coli and a few closely related species. Note that the designation phage shock protein PspE has been applied, incorrectly, in many instances where the genome lacks the phage shock regulon entirely.
Probab=29.66 E-value=2.2e+02 Score=20.90 Aligned_cols=50 Identities=14% Similarity=-0.013 Sum_probs=35.6
Q ss_pred CeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHHhCCeEeec
Q 014952 51 DVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGATSTTA 107 (415)
Q Consensus 51 ~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l 107 (415)
..+.+.++.+. +...+..+...|.++|.++.....+...+...|...+.+
T Consensus 39 inip~~~l~~~-------l~~~~~~~~~~vvlyC~~G~rS~~aa~~L~~~G~~~v~~ 88 (101)
T TIGR02981 39 INIPLKEIKEH-------IATAVPDKNDTVKLYCNAGRQSGMAKDILLDMGYTHAEN 88 (101)
T ss_pred EECCHHHHHHH-------HHHhCCCCCCeEEEEeCCCHHHHHHHHHHHHcCCCeEEe
Confidence 35677666442 333334456789999999999989899999999875544
No 335
>PRK10719 eutA reactivating factor for ethanolamine ammonia lyase; Provisional
Probab=29.11 E-value=4.9e+02 Score=25.43 Aligned_cols=74 Identities=11% Similarity=0.115 Sum_probs=49.4
Q ss_pred CCHHhHHHhhhccC---C--CCcEEEeCCCCCeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHH
Q 014952 25 LPLHTYCFENISQF---A--DRPCIINGPTGDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASY 99 (415)
Q Consensus 25 ~tl~~~l~~~a~~~---p--~~~a~~~~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~ 99 (415)
..+.+.+.+....+ + +..|+-.. .....+|+++.+.++.++.++.+. .+++....+++++...-++-..--.+
T Consensus 354 ~~l~~~i~~~l~~f~~~~~~~~~alal~-g~~~~~y~~iq~la~~i~~~~~~~-~~~~~Pliiv~e~D~aK~LGq~l~~~ 431 (475)
T PRK10719 354 EDLVAAIQQALAWFDLDPETDAYALALP-GSLPPSYAAIQTLAKALVDGVARF-PNKPHPLIVVAEQDMGKALGQLLRPQ 431 (475)
T ss_pred HhHHHHHHHHHHHhhccCCcCcEEEEcC-CCCCCCHHHHHHHHHHHHHHHHhh-ccCCCCEEEEEcccHHHHHHHHHHHh
Confidence 35555555544332 2 33444433 357899999999999999999884 55677888999988766654444333
Q ss_pred h
Q 014952 100 I 100 (415)
Q Consensus 100 ~ 100 (415)
+
T Consensus 432 l 432 (475)
T PRK10719 432 L 432 (475)
T ss_pred c
Confidence 3
No 336
>PRK07445 O-succinylbenzoic acid--CoA ligase; Reviewed
Probab=29.00 E-value=2e+02 Score=27.84 Aligned_cols=79 Identities=9% Similarity=0.011 Sum_probs=53.1
Q ss_pred echHHHHHHHhhhhcCCCCCccC-CCCcEEEEccchHHHHhhHHHHHHHHHcCcEEEEcCC-CCHHHHHHHHHhcCceee
Q 014952 202 LTHKGLVTSVAQQVDGENPNLYL-HKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIMQK-FDIVKLMELVQKYKVTVA 279 (415)
Q Consensus 202 ~t~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~pl~~~~g~~~~~l~~l~~G~~~v~~~~-~~~~~~~~~l~~~~~t~l 279 (415)
+..+.+...+......+. ..+. ..++++....+-+. .+...+++++..|+.++.+++ .....+...+++.+++++
T Consensus 20 ~~~~el~~~~~~~a~~L~-~~g~~~~~~~V~i~~~n~~--e~~~~~~A~~~~G~~~vpl~~~~~~~~~~~~~~~~~~~~~ 96 (452)
T PRK07445 20 YNSQRFYQLAQQLYLQLQ-QLATPRTPPKILLAESDPL--QFLAAFLAAVAAGCPVFLANPHWGQQEWQQVLNLVQPDQI 96 (452)
T ss_pred cChHHHHHHHHHHHHHHH-HhcCCCCCCeEEEecCCCH--HHHHHHHHHHHhCcEEEeeccCCCHHHHHHHHHhcCCCEE
Confidence 355566665555554332 2223 45777777766543 222357899999999998865 677889999999999988
Q ss_pred ecch
Q 014952 280 PFVP 283 (415)
Q Consensus 280 ~~~p 283 (415)
....
T Consensus 97 i~~~ 100 (452)
T PRK07445 97 WGLD 100 (452)
T ss_pred EecC
Confidence 7643
No 337
>PF08479 POTRA_2: POTRA domain, ShlB-type; InterPro: IPR013686 The POTRA domain (for polypeptide-transport-associated domain) is found towards the N terminus of ShlB family proteins (IPR005565 from INTERPRO). ShlB is important in the secretion and activation of the haemolysin ShlA. It has been postulated that the POTRA domain has a chaperone-like function over ShlA; it may fold back into the C-terminal beta-barrel channel []. ; PDB: 2X8X_X 2QDZ_A 3NJT_A 3MC8_A 3MC9_B.
Probab=28.92 E-value=91 Score=21.33 Aligned_cols=26 Identities=19% Similarity=0.243 Sum_probs=22.4
Q ss_pred CCCeeeHHHHHHHHHHHHHHHHHcCC
Q 014952 49 TGDVYTYADVELTSRKVAAGLSKLGV 74 (415)
Q Consensus 49 ~~~~~Ty~el~~~~~~~a~~L~~~g~ 74 (415)
.++.+|..+|.+.++++.+.+++.|.
T Consensus 27 ~g~~l~~~~l~~~~~~l~~~y~~~GY 52 (76)
T PF08479_consen 27 IGRCLTLADLQQLADALTNYYREKGY 52 (76)
T ss_dssp TTSBB-HHHHHHHHHHHHHHHHHTT-
T ss_pred cCCCcCHHHHHHHHHHHHHHHHHcCc
Confidence 37899999999999999999999886
No 338
>PF07994 NAD_binding_5: Myo-inositol-1-phosphate synthase; InterPro: IPR002587 1L-myo-Inositol-1-phosphate synthase (5.5.1.4 from EC) catalyzes the conversion of D-glucose 6-phosphate to 1L-myo-inositol-1-phosphate, the first committed step in the production of all inositol-containing compounds, including phospholipids, either directly or by salvage. The enzyme exists in a cytoplasmic form in a wide range of plants, animals, and fungi. It has also been detected in several bacteria and a chloroplast form is observed in alga and higher plants. Inositol phosphates play an important role in signal transduction. In Saccharomyces cerevisiae (Baker's yeast), the transcriptional regulation of the INO1 gene has been studied in detail [] and its expression is sensitive to the availability of phospholipid precursors as well as growth phase. The regulation of the structural gene encoding 1L-myo-inositol-1-phosphate synthase has also been analyzed at the transcriptional level in the aquatic angiosperm, Spirodela polyrrhiza (Giant duckweed) and the halophyte, Mesembryanthemum crystallinum (Common ice plant) [].; GO: 0004512 inositol-3-phosphate synthase activity, 0006021 inositol biosynthetic process, 0008654 phospholipid biosynthetic process; PDB: 1GR0_A 1P1K_B 1LA2_B 1RM0_B 1P1I_B 1JKF_A 1P1F_A 1P1J_B 1JKI_B 1P1H_A ....
Probab=28.90 E-value=4.4e+02 Score=23.90 Aligned_cols=71 Identities=13% Similarity=0.130 Sum_probs=48.2
Q ss_pred eHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchh----------------------------HHHHHHHHHHhCCeEe
Q 014952 54 TYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQ----------------------------FVFAFLGASYIGATST 105 (415)
Q Consensus 54 Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~----------------------------~~~~~lA~~~~G~~~v 105 (415)
.+.++.+....+..++++.|+. ..|.|.+-+... ..+..+|+++.|+.++
T Consensus 127 ~~~~~e~~~~DI~~f~~~~~~d--~vVvvn~asTE~~~~~~~~~~~t~~~l~~al~~~~~~~~aS~~YA~AAl~~g~~fv 204 (295)
T PF07994_consen 127 KREQVEQIREDIRDFKKENGLD--RVVVVNVASTERYIPVIPGVHDTLEALEKALDENDPEISASMLYAYAALEAGVPFV 204 (295)
T ss_dssp HHHHHHHHHHHHHHHHHHTT-S--CEEEEE-SSCC-S---CCCCCSSHHHHHHHHHTT-TTHHHHHHHHHHHHHTTEEEE
T ss_pred hHHHHHHHHHHHHHHHHHhCCC--cEEEEECCCCCCCCCCCccccCCHHHHHHHhhcCCCcCChHHHHHHHHHHCCCCeE
Confidence 4556667778888888887764 467776655433 3455678889999999
Q ss_pred ecCCCCCH--HHHHHHHHhcCce
Q 014952 106 TANPFYTP--PEIAKQAIASKAK 126 (415)
Q Consensus 106 ~l~~~~~~--~~~~~~l~~~~~~ 126 (415)
-..|.... +.+..+.++.+..
T Consensus 205 N~tP~~~a~~P~l~ela~~~gvp 227 (295)
T PF07994_consen 205 NGTPSNIADDPALVELAEEKGVP 227 (295)
T ss_dssp E-SSSTTTTSHHHHHHHHHHTEE
T ss_pred eccCccccCCHHHHHHHHHcCCC
Confidence 88777665 7788888777644
No 339
>COG2885 OmpA Outer membrane protein and related peptidoglycan-associated (lipo)proteins [Cell envelope biogenesis, outer membrane]
Probab=28.78 E-value=1e+02 Score=25.62 Aligned_cols=59 Identities=17% Similarity=0.106 Sum_probs=41.1
Q ss_pred CCCHHhHHHhhhccCCCCcEEEeCCCC--CeeeHH-HH-HHHHHHHHHHHHHcCCCCCCEEEEE
Q 014952 24 HLPLHTYCFENISQFADRPCIINGPTG--DVYTYA-DV-ELTSRKVAAGLSKLGVQKGDVIMLL 83 (415)
Q Consensus 24 ~~tl~~~l~~~a~~~p~~~a~~~~~~~--~~~Ty~-el-~~~~~~~a~~L~~~g~~~g~~V~i~ 83 (415)
.....+.+....+.+|.....+.+..+ .+-.|. .| .+|++.++.+|...|+.++ +|.+.
T Consensus 98 ~~~~L~~~a~~L~~~p~~~i~V~GHTD~~Gs~~yN~~LS~rRA~aV~~~L~~~Gv~~~-~i~~~ 160 (190)
T COG2885 98 AQATLDELAKYLKKNPITRILVEGHTDSTGSDEYNQALSERRAEAVADYLVSQGVVAD-RISTV 160 (190)
T ss_pred HHHHHHHHHHHHHhCCCcEEEEEecCCCCCCHHHhHHHHHHHHHHHHHHHHHcCCCcc-cEEEE
Confidence 455667777888999987777766433 333343 23 4679999999999998777 55544
No 340
>KOG0830 consensus 40S ribosomal protein SA (P40)/Laminin receptor 1 [Translation, ribosomal structure and biogenesis]
Probab=28.69 E-value=3.9e+02 Score=23.21 Aligned_cols=87 Identities=23% Similarity=0.270 Sum_probs=56.1
Q ss_pred hccCCCCcEEEeCCCCCeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHHhCCeEeecCCCCCHH
Q 014952 35 ISQFADRPCIINGPTGDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGATSTTANPFYTPP 114 (415)
Q Consensus 35 a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~ 114 (415)
.++..|.+.++.- .-||.+|.-.++.++. . -++.|...+..+|.-+..+.-||.. .|+++ +-....+.
T Consensus 10 ~~~~~d~~~i~~~----~~twekl~~aar~i~a----i-enp~dv~v~ssr~~gqravlkfa~~-tgatp--iag~ftpg 77 (254)
T KOG0830|consen 10 YKRRSDGIYIINL----GRTWEKLLLAARAIVA----I-ENPADVSVISSRNTGQRAVLKFAAA-TGATP--IAGRFTPG 77 (254)
T ss_pred ccccCCceEEeec----cccHHHHHHHHHHHhh----c-cCccceEEEccCCcchhHHHHHHHh-hCCCc--cccccccc
Confidence 4455677777665 5678888776544432 1 2578888888888888788888776 78874 44445555
Q ss_pred HHHHHHHh--cCceEEEEccc
Q 014952 115 EIAKQAIA--SKAKIIITQAV 133 (415)
Q Consensus 115 ~~~~~l~~--~~~~~vl~~~~ 133 (415)
.+...++. .+|+++++++.
T Consensus 78 ~ftn~iq~~f~epr~lvvtdp 98 (254)
T KOG0830|consen 78 TFTNQIQAAFREPRLLVVTDP 98 (254)
T ss_pred ccchHHHHhhcCCceeeecCc
Confidence 55554443 36777666543
No 341
>KOG3212 consensus Uncharacterized conserved protein related to IojAP [Function unknown]
Probab=28.42 E-value=79 Score=26.13 Aligned_cols=88 Identities=18% Similarity=0.166 Sum_probs=61.3
Q ss_pred ccceeecCCCCCCCCCCCCHHhHHHhhhccCCCCcEEEeCCCC----------CeeeHHHHHHHHHHHHHHHHHcCCCCC
Q 014952 8 QEFIFRSKLPDIYIPNHLPLHTYCFENISQFADRPCIINGPTG----------DVYTYADVELTSRKVAAGLSKLGVQKG 77 (415)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~tl~~~l~~~a~~~p~~~a~~~~~~~----------~~~Ty~el~~~~~~~a~~L~~~g~~~g 77 (415)
++..++..+|+...-++.++.++..--.+.+.+.++++.-..+ .-.++.++...+..+-.-++... ++|
T Consensus 52 ~ep~~~~g~pesn~~Dh~~ve~vv~lLrdenadDVfVi~vpeem~y~dh~VIcSgrs~rhl~aiAe~lv~m~Kik~-~kg 130 (208)
T KOG3212|consen 52 QEPSFSSGAPESNVSDHLTVEEVVKLLRDENADDVFVIPVPEEMFYADHTVICSGRSDRHLRAIAEALVYMAKIKS-QKG 130 (208)
T ss_pred cCCccccCCCCCChhhhhhHHHHHHHHHhcccCceEEEeccccceeeeeEEEEecCchHHHHHHHHHHHHHHHHhh-cCC
Confidence 3466777888888888888888877778888888988865432 12467888888877777766542 234
Q ss_pred C-EEEEEcCCchhHHHHHHH
Q 014952 78 D-VIMLLLQNCPQFVFAFLG 96 (415)
Q Consensus 78 ~-~V~i~~~~~~~~~~~~lA 96 (415)
| .|-+-...+-+|++.-++
T Consensus 131 d~hvriegk~s~dW~v~D~g 150 (208)
T KOG3212|consen 131 DKHVRIEGKQSSDWIVIDYG 150 (208)
T ss_pred CcccccccccCCCeEEEEec
Confidence 4 566666677777765443
No 342
>KOG1175 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=28.39 E-value=3.7e+02 Score=27.36 Aligned_cols=100 Identities=20% Similarity=0.204 Sum_probs=72.2
Q ss_pred CCCCeEEEecCCCCCCCCceeeechHHHHHHHhhhhcCCCCCccCCCCcEEEEccchHHHHhhHHHHHHHHHcCcEEEEc
Q 014952 180 NPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIM 259 (415)
Q Consensus 180 ~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~l~~l~~G~~~v~~ 259 (415)
..+.++.+.---++.+. .+ ++...++.....+..... ..++.++|++..++|+.--.-+. ++++...|+.....
T Consensus 78 ~~~~~a~~~~~~~~~~~--~~-~t~~el~~~v~~~a~~l~-~~g~~kGD~V~~~mPm~~e~~ia--~lA~~r~Gai~~~v 151 (626)
T KOG1175|consen 78 GGDKVAIIFEGNEGGDT--EV-WTYKELLDQVVRLANVLR-KCGLKKGDTVAIYMPMIPEAVIA--MLACARIGAIHSSV 151 (626)
T ss_pred CCCCcEEEEEecCCCce--EE-EEHHHHHHHHHHHHHHHH-hcCCCCCcEEEEeccCChHHHHH--HHHHhhcCeEEEEe
Confidence 35666666654444443 44 677777776666665555 66889999999999997655543 67778888876665
Q ss_pred -CCCCHHHHHHHHHhcCceeeecchHH
Q 014952 260 -QKFDIVKLMELVQKYKVTVAPFVPPI 285 (415)
Q Consensus 260 -~~~~~~~~~~~l~~~~~t~l~~~p~~ 285 (415)
..|.+..+..-++..++.+++..-..
T Consensus 152 ~~~fs~~~l~~Rl~~~~~k~i~t~d~~ 178 (626)
T KOG1175|consen 152 FAGFSAKELLDRLQDSKAKVIITQDVV 178 (626)
T ss_pred eccCCHHHHHHHHHhcCCCEEEEEeee
Confidence 46999999999999998888775433
No 343
>PRK11823 DNA repair protein RadA; Provisional
Probab=28.08 E-value=5e+02 Score=25.18 Aligned_cols=82 Identities=13% Similarity=0.122 Sum_probs=52.9
Q ss_pred CCCCCCEEEEEcCCch--hHHHHHHHHHH--hCCeEeecCCCCCHHHHHHHHHhcCc---eEEEEcccchHHHHhhhhhc
Q 014952 73 GVQKGDVIMLLLQNCP--QFVFAFLGASY--IGATSTTANPFYTPPEIAKQAIASKA---KIIITQAVYNDKVRDLSEHH 145 (415)
Q Consensus 73 g~~~g~~V~i~~~~~~--~~~~~~lA~~~--~G~~~v~l~~~~~~~~~~~~l~~~~~---~~vl~~~~~~~~~~~~~~~~ 145 (415)
|+.+|..+.|..+.+. ..++..++... .|..++.+....+.+++.....+.+. .+.+..+...+.+.......
T Consensus 76 Gi~~Gs~~lI~G~pG~GKTtL~lq~a~~~a~~g~~vlYvs~Ees~~qi~~ra~rlg~~~~~l~~~~e~~l~~i~~~i~~~ 155 (446)
T PRK11823 76 GLVPGSVVLIGGDPGIGKSTLLLQVAARLAAAGGKVLYVSGEESASQIKLRAERLGLPSDNLYLLAETNLEAILATIEEE 155 (446)
T ss_pred CccCCEEEEEECCCCCCHHHHHHHHHHHHHhcCCeEEEEEccccHHHHHHHHHHcCCChhcEEEeCCCCHHHHHHHHHhh
Confidence 8999999999998763 44444444443 37777778877777777666665443 24444444455555555555
Q ss_pred CceEEEeCC
Q 014952 146 GARIVTIDP 154 (415)
Q Consensus 146 ~~~~i~~~~ 154 (415)
..+++++|.
T Consensus 156 ~~~lVVIDS 164 (446)
T PRK11823 156 KPDLVVIDS 164 (446)
T ss_pred CCCEEEEec
Confidence 677888875
No 344
>PRK08198 threonine dehydratase; Provisional
Probab=27.86 E-value=4.2e+02 Score=25.20 Aligned_cols=92 Identities=13% Similarity=0.077 Sum_probs=56.4
Q ss_pred CcEEEeCCCCCeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHHhCCeEeecCCCCCHHHHHHHH
Q 014952 41 RPCIINGPTGDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGATSTTANPFYTPPEIAKQA 120 (415)
Q Consensus 41 ~~a~~~~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l 120 (415)
++.+-.++-+.+-||++-... +.+.....+. .++.|.... .+-......++|...|..+..+-|...+......+
T Consensus 38 ~i~~K~E~~nptGS~K~R~a~-~~i~~~~~~~---~~~~vv~aS-sGN~g~alA~~a~~~G~~~~iv~p~~~~~~k~~~~ 112 (404)
T PRK08198 38 EVYLKCENLQRTGSFKIRGAY-NKIASLSEEE---RARGVVAAS-AGNHAQGVAYAASLLGIKATIVMPETAPLSKVKAT 112 (404)
T ss_pred EEEEEECCCCCCCCCHHHHHH-HHHHhccHhh---cCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHH
Confidence 455555433345555543322 1222222222 244444443 45556666688999999888888887777878889
Q ss_pred HhcCceEEEEcccchHH
Q 014952 121 IASKAKIIITQAVYNDK 137 (415)
Q Consensus 121 ~~~~~~~vl~~~~~~~~ 137 (415)
+..+++++++.....+.
T Consensus 113 ~~~GA~Vi~~~~~~~~~ 129 (404)
T PRK08198 113 RSYGAEVVLHGDVYDEA 129 (404)
T ss_pred HhCCCEEEEECCCHHHH
Confidence 99999999997654443
No 345
>PRK08638 threonine dehydratase; Validated
Probab=27.33 E-value=4.9e+02 Score=24.05 Aligned_cols=55 Identities=13% Similarity=0.137 Sum_probs=42.0
Q ss_pred EcCCchhHHHHHHHHHHhCCeEeecCCCCCHHHHHHHHHhcCceEEEEcccchHH
Q 014952 83 LLQNCPQFVFAFLGASYIGATSTTANPFYTPPEIAKQAIASKAKIIITQAVYNDK 137 (415)
Q Consensus 83 ~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~vl~~~~~~~~ 137 (415)
....+-.-....++|...|..+..+-|...++.....++..+++++++.....+.
T Consensus 80 ~~SsGN~g~alA~~aa~~G~~~~iv~p~~~~~~k~~~~~~~GA~V~~~~~~~~~~ 134 (333)
T PRK08638 80 ACSAGNHAQGVALSCALLGIDGKVVMPKGAPKSKVAATCGYGAEVVLHGDNFNDT 134 (333)
T ss_pred EeCCcHHHHHHHHHHHHcCCCEEEEeCCCCcHHHHHHHHHcCCEEEEECcCHHHH
Confidence 3344555667777889999888888887777788889999999999997654433
No 346
>COG5012 Predicted cobalamin binding protein [General function prediction only]
Probab=27.30 E-value=3.4e+02 Score=23.40 Aligned_cols=84 Identities=14% Similarity=0.202 Sum_probs=47.3
Q ss_pred HHHHhhHHHHHHHHHcCcEEEEc-CCCCHHHHHHHHHhcCceeeecchHHHHHHH------cCCCCCCCCcccceeeeec
Q 014952 237 FHIYSLNSVLLCALRVGAAILIM-QKFDIVKLMELVQKYKVTVAPFVPPIVLAVA------KSGDVDKYDMSSIRTVMSG 309 (415)
Q Consensus 237 ~~~~g~~~~~l~~l~~G~~~v~~-~~~~~~~~~~~l~~~~~t~l~~~p~~l~~l~------~~~~~~~~~l~~lr~v~~g 309 (415)
-|..|-....-.-=..|..++=. ....++++.+..++++++.+.++-.+-..+. +..+.+. +..-=.+..|
T Consensus 116 vHdIGk~iV~~ml~~aGfevidLG~dvP~e~fve~a~e~k~d~v~~SalMTttm~~~~~viE~L~eeG--iRd~v~v~vG 193 (227)
T COG5012 116 VHDIGKNIVATMLEAAGFEVIDLGRDVPVEEFVEKAKELKPDLVSMSALMTTTMIGMKDVIELLKEEG--IRDKVIVMVG 193 (227)
T ss_pred HHHHHHHHHHHHHHhCCcEEEecCCCCCHHHHHHHHHHcCCcEEechHHHHHHHHHHHHHHHHHHHcC--CccCeEEeec
Confidence 56666542222222345555444 3467899999999999999887654432222 1111111 1111135568
Q ss_pred CCCCCHHHHHHHH
Q 014952 310 AAPMGKELEDAVR 322 (415)
Q Consensus 310 G~~l~~~~~~~~~ 322 (415)
|+|++.+..+++-
T Consensus 194 GApvtq~~a~~iG 206 (227)
T COG5012 194 GAPVTQDWADKIG 206 (227)
T ss_pred CccccHHHHHHhC
Confidence 9999877766553
No 347
>PRK06721 threonine synthase; Reviewed
Probab=27.19 E-value=3.2e+02 Score=25.49 Aligned_cols=90 Identities=18% Similarity=0.094 Sum_probs=52.5
Q ss_pred CcEEEeCCCCCeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHHhCCeEeecCCCC-CHHHHHHH
Q 014952 41 RPCIINGPTGDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGATSTTANPFY-TPPEIAKQ 119 (415)
Q Consensus 41 ~~a~~~~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~-~~~~~~~~ 119 (415)
++.+-.+.-+..-|+++-... ..+.. ..+.|. ++|... ..+-.-..+.+++...|..+..+-|.. .+......
T Consensus 44 ~i~~K~E~~nptGS~KdR~a~-~~i~~-a~~~g~---~~vV~a-SsGN~G~alA~~aa~~G~~~~vvvp~~~~~~~k~~~ 117 (352)
T PRK06721 44 QLYGKYEGANPTGSFKDRGMV-MAVAK-AKEEGS---EAIICA-STGNTSASAAAYAARLGMKCIIVIPEGKIAHGKLAQ 117 (352)
T ss_pred eEEEEecCCCCccchHHHHHH-HHHHH-HHHCCC---CEEEEE-CCcHHHHHHHHHHHHCCCcEEEEECCCCCCHHHHHH
Confidence 455545433444455544333 22222 334442 334433 344455666777888998777777764 34556668
Q ss_pred HHhcCceEEEEcccchH
Q 014952 120 AIASKAKIIITQAVYND 136 (415)
Q Consensus 120 l~~~~~~~vl~~~~~~~ 136 (415)
++..++++++++....+
T Consensus 118 ~~~~GA~V~~~~~~~~~ 134 (352)
T PRK06721 118 AVAYGAEIISIEGNFDD 134 (352)
T ss_pred HHHcCCEEEEECCCHHH
Confidence 88999999999865433
No 348
>cd02070 corrinoid_protein_B12-BD B12 binding domain of corrinoid proteins. A family of small methanogenic corrinoid proteins that bind methyl-Co(III) 5-hydroxybenzimidazolylcobamide as a cofactor. They play a role on the methanogenesis from trimethylamine, dimethylamine or monomethylamine, which is initiated by a series of corrinoid-dependent methyltransferases.
Probab=26.96 E-value=3.8e+02 Score=22.51 Aligned_cols=83 Identities=13% Similarity=0.029 Sum_probs=56.9
Q ss_pred CCeeeHHHHHHHHHHHHHHHHHc-------CCCCCCEEEEEcCCc----hhHHHHHHHHHHhCCeEeecCCCCCHHHHHH
Q 014952 50 GDVYTYADVELTSRKVAAGLSKL-------GVQKGDVIMLLLQNC----PQFVFAFLGASYIGATSTTANPFYTPPEIAK 118 (415)
Q Consensus 50 ~~~~Ty~el~~~~~~~a~~L~~~-------g~~~g~~V~i~~~~~----~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~ 118 (415)
...++..|.+-.++.+-..+..+ +...+.+|.+.+..+ +-..+....+...|.-++-+..+.+.+++..
T Consensus 48 ~~~i~va~e~~as~~~~~~l~~l~~~~~~~~~~~~~~vl~~~~~gd~H~lG~~~v~~~l~~~G~~vi~lG~~~p~~~l~~ 127 (201)
T cd02070 48 EGEIFVPELLMAADAMKAGLDLLKPLLGKSKSAKKGKVVIGTVEGDIHDIGKNLVATMLEANGFEVIDLGRDVPPEEFVE 127 (201)
T ss_pred cCCeeHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCeEEEEecCCccchHHHHHHHHHHHHCCCEEEECCCCCCHHHHHH
Confidence 45778877777666555544332 221234566665543 3334445555678999999999999999999
Q ss_pred HHHhcCceEEEEcc
Q 014952 119 QAIASKAKIIITQA 132 (415)
Q Consensus 119 ~l~~~~~~~vl~~~ 132 (415)
.+.+.+|++|..+.
T Consensus 128 ~~~~~~~d~v~lS~ 141 (201)
T cd02070 128 AVKEHKPDILGLSA 141 (201)
T ss_pred HHHHcCCCEEEEec
Confidence 99999999988765
No 349
>PRK07409 threonine synthase; Validated
Probab=26.88 E-value=3e+02 Score=25.65 Aligned_cols=89 Identities=15% Similarity=0.052 Sum_probs=52.6
Q ss_pred CcEEEeCCCCCeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHHhCCeEeecCCCC-CHHHHHHH
Q 014952 41 RPCIINGPTGDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGATSTTANPFY-TPPEIAKQ 119 (415)
Q Consensus 41 ~~a~~~~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~-~~~~~~~~ 119 (415)
++.+-.+..+..-+|++-.... .+. .+.+.|. +.| +....+-.-..+.++|...|..+..+-|.. .+......
T Consensus 47 ~i~~K~E~~nptGSfKdR~a~~-~l~-~a~~~g~---~~i-v~aSsGN~g~alA~~a~~~G~~~~ivvP~~~~~~~k~~~ 120 (353)
T PRK07409 47 EVYVKYEGLNPTGSFKDRGMTM-AVT-KAKEEGA---KAV-ICASTGNTSASAAAYAARAGLKAFVLIPEGKIALGKLAQ 120 (353)
T ss_pred eEEEEecCCCCccchHHHHHHH-HHH-HHHHCCC---CEE-EEECCcHHHHHHHHHHHHcCCCEEEEEcCCCCchhhHHH
Confidence 4555554334455565443222 222 2334442 233 333444446777788889998876666664 45566667
Q ss_pred HHhcCceEEEEcccch
Q 014952 120 AIASKAKIIITQAVYN 135 (415)
Q Consensus 120 l~~~~~~~vl~~~~~~ 135 (415)
++..++++++++....
T Consensus 121 ~~~~GA~Vi~~~~~~~ 136 (353)
T PRK07409 121 AVMYGAEIIQIDGNFD 136 (353)
T ss_pred HHhcCCEEEEECCCHH
Confidence 7889999999986433
No 350
>TIGR02035 D_Ser_am_lyase D-serine ammonia-lyase. This family consists of D-serine ammonia-lyase (EC 4.3.1.18), a pyridoxal-phosphate enzyme that converts D-serine to pyruvate and NH3. This enzyme is also called D-serine dehydratase and D-serine deaminase and was previously designated EC 4.2.1.14. It is homologous to an enzyme that acts on threonine and may itself act weakly on threonine.
Probab=26.85 E-value=3.2e+02 Score=26.37 Aligned_cols=61 Identities=7% Similarity=-0.081 Sum_probs=46.8
Q ss_pred EEEEcCCchhHHHHHHHHHHhCCeEeecCCCCCHHHHHHHHHhcCceEEEEcccchHHHHh
Q 014952 80 IMLLLQNCPQFVFAFLGASYIGATSTTANPFYTPPEIAKQAIASKAKIIITQAVYNDKVRD 140 (415)
Q Consensus 80 V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~vl~~~~~~~~~~~ 140 (415)
-.+....+-.-....+++..+|..+..+-|...+......++..+++++++.....+....
T Consensus 154 ~Vv~aSsGN~G~slA~~Aa~lG~~~~IvmP~~a~~~K~~~ir~~GAeVv~~~~~~~~a~~~ 214 (431)
T TIGR02035 154 SIAVGSTGNLGLSIGIISAALGFQVTVHMSADAKQWKKDKLRSKGVTVVEYESDYGVAVEE 214 (431)
T ss_pred eEEEECccHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHcCCEEEEECCCHHHHHHH
Confidence 3444555556667778888899888888888888889999999999999998765544333
No 351
>TIGR01127 ilvA_1Cterm threonine dehydratase, medium form. A form of threonine dehydratase with two copies of the C-terminal domain Pfam:PF00585 is described by TIGR01124. This model describes a phylogenetically distinct form with a single copy of pfam00585. This form branches with the catabolic threonine dehydratase of E. coli; many members are designated as catabolic for this reason. However, the catabolic form lacks any pfam00585 domain. Many members of this model are found in species with other Ile biosynthetic enzymes.
Probab=26.58 E-value=5.4e+02 Score=24.17 Aligned_cols=92 Identities=15% Similarity=0.091 Sum_probs=56.9
Q ss_pred CCcEEEeCCCCCeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHHhCCeEeecCCCCCHHHHHHH
Q 014952 40 DRPCIINGPTGDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGATSTTANPFYTPPEIAKQ 119 (415)
Q Consensus 40 ~~~a~~~~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~ 119 (415)
.++.+-.+..+.+-||++- ...+.+.. +.+.|..+ -.+....+-......++|.+.|..+..+-|...+......
T Consensus 15 ~~i~~K~E~~~ptgS~K~R-~a~~~i~~-~~~~~~~~---~vv~aSsGN~g~alA~~a~~~G~~~~iv~p~~~~~~k~~~ 89 (380)
T TIGR01127 15 SEVYLKLENLQKTGSFKIR-GALNKIAN-LSEDQRQR---GVVAASAGNHAQGVAYAAKKFGIKAVIVMPESAPPSKVKA 89 (380)
T ss_pred CeEEEEecCCCCCCCcHHH-HHHHHHHh-cchhccCC---EEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCCcHHHHHH
Confidence 3455555533445566542 22222222 33333322 2344444556667778888999988888888788888889
Q ss_pred HHhcCceEEEEcccchH
Q 014952 120 AIASKAKIIITQAVYND 136 (415)
Q Consensus 120 l~~~~~~~vl~~~~~~~ 136 (415)
++..++.++++.....+
T Consensus 90 ~~~~GA~V~~~~~~~~~ 106 (380)
T TIGR01127 90 TKSYGAEVILHGDDYDE 106 (380)
T ss_pred HHHCCCEEEEECCCHHH
Confidence 99999999998764333
No 352
>PRK06145 acyl-CoA synthetase; Validated
Probab=26.57 E-value=2.1e+02 Score=27.79 Aligned_cols=82 Identities=9% Similarity=0.036 Sum_probs=57.8
Q ss_pred eechHHHHHHHhhhhcCCCCCccCCCCcEEEEccchHHHHhhHHHHHHHHHcCcEEEEcCC-CCHHHHHHHHHhcCceee
Q 014952 201 MLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIMQK-FDIVKLMELVQKYKVTVA 279 (415)
Q Consensus 201 ~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~l~~l~~G~~~v~~~~-~~~~~~~~~l~~~~~t~l 279 (415)
.+|...+...+......+. ..+..+++++..+.+-.-. +...+++++..|+..+..+. .....+...++..++..+
T Consensus 27 ~~ty~el~~~v~~~a~~L~-~~g~~~~~~v~i~~~~~~~--~~~~~la~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~~ 103 (497)
T PRK06145 27 EISYAEFHQRILQAAGMLH-ARGIGQGDVVALLMKNSAA--FLELAFAASYLGAVFLPINYRLAADEVAYILGDAGAKLL 103 (497)
T ss_pred ceeHHHHHHHHHHHHHHHH-HcCCCCCCEEEEECCCCHH--HHHHHHHHHhcCcEEEecccccCHHHHHHHHHhcCCcEE
Confidence 4678888776666555332 3356788888888765543 22357899999999888764 677888888998888888
Q ss_pred ecchHH
Q 014952 280 PFVPPI 285 (415)
Q Consensus 280 ~~~p~~ 285 (415)
......
T Consensus 104 i~~~~~ 109 (497)
T PRK06145 104 LVDEEF 109 (497)
T ss_pred EEccch
Confidence 765443
No 353
>PF03808 Glyco_tran_WecB: Glycosyl transferase WecB/TagA/CpsF family; InterPro: IPR004629 The WecG member of this superfamily, believed to be UDP-N-acetyl-D-mannosaminuronic acid transferase, plays a role in Enterobacterial common antigen (eca) synthesis in Escherichia coli. Another family member, the Bacillus subtilis TagA protein, is involved in the biosynthesis of the cell wall polymer poly(glycerol phosphate). The third family member, CpsF, CMP-N-acetylneuraminic acid synthetase has a role in the capsular polysaccharide biosynthesis pathway.; GO: 0009058 biosynthetic process
Probab=26.44 E-value=80 Score=25.89 Aligned_cols=74 Identities=11% Similarity=0.130 Sum_probs=38.8
Q ss_pred cCcEEEEcCCCCHHHHHHHHHhcCceeeecchHHHHHHHcCCCCCCCCcccceeeeecCCCC-CHHHHHHHHhhCCCCcc
Q 014952 252 VGAAILIMQKFDIVKLMELVQKYKVTVAPFVPPIVLAVAKSGDVDKYDMSSIRTVMSGAAPM-GKELEDAVRAKLPHAKL 330 (415)
Q Consensus 252 ~G~~~v~~~~~~~~~~~~~l~~~~~t~l~~~p~~l~~l~~~~~~~~~~l~~lr~v~~gG~~l-~~~~~~~~~~~~~~~~~ 330 (415)
..+.+++++......+.+.+ ..++..-..-+.++..+++.... ...+..++||.+- -....+.+++.+|+..+
T Consensus 4 ~~adlv~~DG~~i~~~~~~~-g~~~~~rv~g~dl~~~l~~~~~~-----~~~~ifllG~~~~~~~~~~~~l~~~yP~l~i 77 (172)
T PF03808_consen 4 NSADLVLPDGMPIVWAARLL-GRPLPERVTGSDLFPDLLRRAEQ-----RGKRIFLLGGSEEVLEKAAANLRRRYPGLRI 77 (172)
T ss_pred HhCCEEecCCHHHHHHHHHc-CCCCCcccCHHHHHHHHHHHHHH-----cCCeEEEEeCCHHHHHHHHHHHHHHCCCeEE
Confidence 44556666654444455554 33332333444455555543322 2346777777642 24555677777777665
Q ss_pred c
Q 014952 331 G 331 (415)
Q Consensus 331 ~ 331 (415)
.
T Consensus 78 v 78 (172)
T PF03808_consen 78 V 78 (172)
T ss_pred E
Confidence 4
No 354
>TIGR01124 ilvA_2Cterm threonine ammonia-lyase, biosynthetic, long form. Forms scoring between the trusted and noise cutoff tend to branch with this subgroup of threonine ammonia-lyase phylogenetically but have only a single copy of the C-terminal domain.
Probab=26.42 E-value=5.7e+02 Score=25.29 Aligned_cols=91 Identities=13% Similarity=0.122 Sum_probs=56.7
Q ss_pred CCcEEEeCCCCCeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHHhCCeEeecCCCCCHHHHHHH
Q 014952 40 DRPCIINGPTGDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGATSTTANPFYTPPEIAKQ 119 (415)
Q Consensus 40 ~~~a~~~~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~ 119 (415)
.++.+-.++-...-||+. +-..+.+++.-.+.+ .+| | +....+-......++|.++|..+..+-|...+......
T Consensus 32 ~~i~lK~E~lqptgSfK~-RgA~n~i~~l~~~~~-~~g--V-V~aSaGNha~~vA~aa~~~Gi~~~IvmP~~tp~~Kv~~ 106 (499)
T TIGR01124 32 NRILIKREDLQPVFSFKL-RGAYNKMAQLSPEQK-ARG--V-IAASAGNHAQGVAFSAARLGLKALIVMPETTPDIKVDA 106 (499)
T ss_pred CEEEEEecCCCCCCCCHH-HHHHHHHHHhhHHhc-CCE--E-EEECCCHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHH
Confidence 455555554344556665 222333333222221 222 3 33445555666678889999988888888777777889
Q ss_pred HHhcCceEEEEcccch
Q 014952 120 AIASKAKIIITQAVYN 135 (415)
Q Consensus 120 l~~~~~~~vl~~~~~~ 135 (415)
++..+++++++.....
T Consensus 107 ~r~~GA~Vvl~g~~~d 122 (499)
T TIGR01124 107 VRGFGGEVVLHGANFD 122 (499)
T ss_pred HHhCCCEEEEeCcCHH
Confidence 9999999999876543
No 355
>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]
Probab=26.24 E-value=6.1e+02 Score=24.66 Aligned_cols=59 Identities=12% Similarity=0.090 Sum_probs=32.2
Q ss_pred CCCCEEEEEcCCchhHHHHHHHHHHhCCeEeecCC-CCCHHHHHHHHHhcCceEEEEcccc
Q 014952 75 QKGDVIMLLLQNCPQFVFAFLGASYIGATSTTANP-FYTPPEIAKQAIASKAKIIITQAVY 134 (415)
Q Consensus 75 ~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~-~~~~~~~~~~l~~~~~~~vl~~~~~ 134 (415)
++||+|++=-| +...+...+-..-+..+.||++. ....+.+...+...+++++++...+
T Consensus 177 ~pGd~v~vE~P-tY~~~~~~~~~~g~~~~~vp~d~~G~~~e~le~~~~~~~~k~~y~~P~~ 236 (459)
T COG1167 177 DPGDTVLVEDP-TYPGALQALEALGARVIPVPVDEDGIDPEALEEALAQWKPKAVYVTPTF 236 (459)
T ss_pred CCCCEEEEcCC-CcHHHHHHHHHcCCcEEecCCCCCCCCHHHHHHHHhhcCCcEEEECCCC
Confidence 45665554433 33333333333333344444442 3556778888877778888876543
No 356
>smart00450 RHOD Rhodanese Homology Domain. An alpha beta fold found duplicated in the Rhodanese protein. The the Cysteine containing enzymatically active version of the domain is also found in the CDC25 class of protein phosphatases and a variety of proteins such as sulfide dehydrogenases and stress proteins such as Senesence specific protein 1 in plants, PspE and GlpE in bacteria and cyanide and arsenate resistance proteins. Inactive versions with a loss of the cysteine are also seen in Dual specificity phosphatases, ubiquitin hydrolases from yeast and in sulfuryltransferases. These are likely to play a role in protein interactions.
Probab=26.12 E-value=2e+02 Score=19.97 Aligned_cols=40 Identities=15% Similarity=0.145 Sum_probs=30.4
Q ss_pred HHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHHhCCe
Q 014952 64 KVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGAT 103 (415)
Q Consensus 64 ~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~ 103 (415)
.+...+...+..+++.|.+++.++.....+...+...|..
T Consensus 43 ~~~~~~~~~~~~~~~~iv~~c~~g~~a~~~~~~l~~~G~~ 82 (100)
T smart00450 43 EFEELLKRLGLDKDKPVVVYCRSGNRSAKAAWLLRELGFK 82 (100)
T ss_pred HHHHHHHHcCCCCCCeEEEEeCCCcHHHHHHHHHHHcCCC
Confidence 3444555667888889999998888887777778888876
No 357
>TIGR00715 precor6x_red precorrin-6x reductase. This enzyme was found to be a monomer by gel filtration.
Probab=26.03 E-value=3.4e+02 Score=24.05 Aligned_cols=75 Identities=17% Similarity=0.204 Sum_probs=49.9
Q ss_pred CCEEEEEcCCchhHHHHHHHHHHhCCe---EeecCCCCCHHHHHHHHHhcCceEEEEccc-----chHHHHhhhhhcCce
Q 014952 77 GDVIMLLLQNCPQFVFAFLGASYIGAT---STTANPFYTPPEIAKQAIASKAKIIITQAV-----YNDKVRDLSEHHGAR 148 (415)
Q Consensus 77 g~~V~i~~~~~~~~~~~~lA~~~~G~~---~v~l~~~~~~~~~~~~l~~~~~~~vl~~~~-----~~~~~~~~~~~~~~~ 148 (415)
+.++.+-.-...+.+- .|..+|.. .+...+-.+.+.-..++++.+++++++-++ ..+++.. ....+++
T Consensus 150 ~~~~~~RvLP~~~~l~---~~~~~G~~~~~iia~~gPfs~e~n~al~~~~~i~~lVtK~SG~~Gg~~eKi~A-A~~lgi~ 225 (256)
T TIGR00715 150 EAVVFVRVLPYPQALA---QALKLGFPSDRIIAMRGPFSEELEKALLREYRIDAVVTKASGEQGGELEKVKA-AEALGIN 225 (256)
T ss_pred CceEEEEECCCchhhH---HHHHcCCChhcEEEEeCCCCHHHHHHHHHHcCCCEEEEcCCCCccchHHHHHH-HHHcCCc
Confidence 4455555545555555 55666653 666676677888889999999999999755 3455533 4456788
Q ss_pred EEEeCCC
Q 014952 149 IVTIDPP 155 (415)
Q Consensus 149 ~i~~~~~ 155 (415)
+|.+..+
T Consensus 226 vivI~RP 232 (256)
T TIGR00715 226 VIRIARP 232 (256)
T ss_pred EEEEeCC
Confidence 8887643
No 358
>PRK07768 long-chain-fatty-acid--CoA ligase; Validated
Probab=25.97 E-value=6e+02 Score=25.02 Aligned_cols=94 Identities=14% Similarity=0.083 Sum_probs=60.3
Q ss_pred CCCCcEEEeCCCC-------CeeeHHHHHHHHHHHHHHHHHcCCCCC-CEEEEEcCCc--hhHHHHHHHHHHhCCeEeec
Q 014952 38 FADRPCIINGPTG-------DVYTYADVELTSRKVAAGLSKLGVQKG-DVIMLLLQNC--PQFVFAFLGASYIGATSTTA 107 (415)
Q Consensus 38 ~p~~~a~~~~~~~-------~~~Ty~el~~~~~~~a~~L~~~g~~~g-~~V~i~~~~~--~~~~~~~lA~~~~G~~~v~l 107 (415)
.++.++++...++ ..+|++.+...+..+.. ..++.++ |++...++-. ..++..+++.+..|+..+.+
T Consensus 150 ~~~~~a~i~~TSGtTG~PKgv~~s~~~~~~~~~~~~~---~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~~v~~ 226 (545)
T PRK07768 150 GEDDLALMQLTSGSTGSPKAVQITHGNLYANAEAMFV---AAEFDVETDVMVSWLPLFHDMGMVGFLTVPMYFGAELVKV 226 (545)
T ss_pred CCCCEEEEEeCCCCCCCCceEEEcHHHHHHHHHHHHH---hcCCCCCCceeEEeCCCccchHHHHHHHHHHHCCceEEEe
Confidence 3566777654333 46899888765544433 3466666 7777776643 44444566677889888777
Q ss_pred CCCC---CHHHHHHHHHhcCceEEEEcccc
Q 014952 108 NPFY---TPPEIAKQAIASKAKIIITQAVY 134 (415)
Q Consensus 108 ~~~~---~~~~~~~~l~~~~~~~vl~~~~~ 134 (415)
.+.. .+..+..++.+.++..+.+....
T Consensus 227 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 256 (545)
T PRK07768 227 TPMDFLRDPLLWAELISKYRGTMTAAPNFA 256 (545)
T ss_pred CHHHHHHhHHHHHHHHHHhCCEEEECchHH
Confidence 6532 45567788999999887554433
No 359
>COG1205 Distinct helicase family with a unique C-terminal domain including a metal-binding cysteine cluster [General function prediction only]
Probab=25.70 E-value=4.7e+02 Score=27.97 Aligned_cols=111 Identities=10% Similarity=0.041 Sum_probs=63.1
Q ss_pred CCCcEEEEccchHHHHhhHH----HHHHHHHcCcEEEEcCCCCHHHHHHHHHhcCceeeecchHHHHHH-HcCCCCCCCC
Q 014952 225 HKEDVILCVLPLFHIYSLNS----VLLCALRVGAAILIMQKFDIVKLMELVQKYKVTVAPFVPPIVLAV-AKSGDVDKYD 299 (415)
Q Consensus 225 ~~~~~~~~~~pl~~~~g~~~----~~l~~l~~G~~~v~~~~~~~~~~~~~l~~~~~t~l~~~p~~l~~l-~~~~~~~~~~ 299 (415)
.+..+.+...|+.-...--. -+..-+-.+..+...+...+..-.+.+.+.++.+++.+|.++..+ ++....-.+.
T Consensus 113 ~~~a~AL~lYPtnALa~DQ~~rl~~~~~~~~~~v~~~~y~Gdt~~~~r~~~~~~pp~IllTNpdMLh~~llr~~~~~~~~ 192 (851)
T COG1205 113 DPSARALLLYPTNALANDQAERLRELISDLPGKVTFGRYTGDTPPEERRAIIRNPPDILLTNPDMLHYLLLRNHDAWLWL 192 (851)
T ss_pred CcCccEEEEechhhhHhhHHHHHHHHHHhCCCcceeeeecCCCChHHHHHHHhCCCCEEEeCHHHHHHHhccCcchHHHH
Confidence 34446677777643322111 112222223344555555666666688999999999999999984 4444434455
Q ss_pred cccceeeeec-----CCCCCHHHHHHHHhhCCCCcccccccccc
Q 014952 300 MSSIRTVMSG-----AAPMGKELEDAVRAKLPHAKLGQGYGMTE 338 (415)
Q Consensus 300 l~~lr~v~~g-----G~~l~~~~~~~~~~~~~~~~~~~~YG~tE 338 (415)
+.+||++++= ......++.-.+++. .++...||.+-
T Consensus 193 ~~~Lk~lVvDElHtYrGv~GS~vA~llRRL---~~~~~~~~~~~ 233 (851)
T COG1205 193 LRNLKYLVVDELHTYRGVQGSEVALLLRRL---LRRLRRYGSPL 233 (851)
T ss_pred HhcCcEEEEecceeccccchhHHHHHHHHH---HHHHhccCCCc
Confidence 6789988772 113344454444443 24555666443
No 360
>KOG2882 consensus p-Nitrophenyl phosphatase [Inorganic ion transport and metabolism]
Probab=25.53 E-value=3.2e+02 Score=24.80 Aligned_cols=64 Identities=9% Similarity=0.045 Sum_probs=42.3
Q ss_pred HHhhhccCCCCcEEEeCCCCCeeeHHHHHHHHHH-----------------HHHHHHHcCCCCCCEEEEEcCCchhHHHH
Q 014952 31 CFENISQFADRPCIINGPTGDVYTYADVELTSRK-----------------VAAGLSKLGVQKGDVIMLLLQNCPQFVFA 93 (415)
Q Consensus 31 l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~-----------------~a~~L~~~g~~~g~~V~i~~~~~~~~~~~ 93 (415)
.....+..+.++.++.. +.+.|+.|+.++..+ +|.+|+++. ..+.+|.++....+.--+-
T Consensus 46 ~l~~L~~~gK~i~fvTN--NStksr~~y~kK~~~lG~~~v~e~~i~ssa~~~a~ylk~~~-~~~k~Vyvig~~gi~~eL~ 122 (306)
T KOG2882|consen 46 ALNLLKSLGKQIIFVTN--NSTKSREQYMKKFAKLGFNSVKEENIFSSAYAIADYLKKRK-PFGKKVYVIGEEGIREELD 122 (306)
T ss_pred HHHHHHHcCCcEEEEeC--CCcchHHHHHHHHHHhCccccCcccccChHHHHHHHHHHhC-cCCCeEEEecchhhhHHHH
Confidence 44556677788888887 777788887766444 466676654 4567788877777665554
Q ss_pred HHHH
Q 014952 94 FLGA 97 (415)
Q Consensus 94 ~lA~ 97 (415)
..+.
T Consensus 123 ~aG~ 126 (306)
T KOG2882|consen 123 EAGF 126 (306)
T ss_pred HcCc
Confidence 4443
No 361
>cd00754 MoaD Ubiquitin domain of MoaD-like proteins. MoaD family. Members of this family are involved in biosynthesis of the molybdenum cofactor (Moco), an essential cofactor of a diverse group of redox enzymes. Moco biosynthesis is an evolutionarily conserved pathway present in eubacteria, archaea and eukaryotes. Moco contains a tricyclic pyranopterin, termed molybdopterin (MPT), that contains the cis-dithiolene group responsible for molybdenum ligation. This dithiolene group is generated by MPT synthase, the second major step in Moco biosynthesis. MPT synthase consists of a large (MoeE) and small (MoaD) subunit. The small subunit is inserted into the lare subunit to form the active site. The small subunit, which is structurally similar to ubiquitin, contains a C-terminal thiocarboxylated glycine residue that serves as a sulfur donor for the synthesis of the MPT dithiolene group.
Probab=25.45 E-value=1.2e+02 Score=20.66 Aligned_cols=49 Identities=12% Similarity=0.179 Sum_probs=31.6
Q ss_pred CCCCCCCHHhHHHhhhccCCC-------CcEEEeCCCCCeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcC
Q 014952 20 YIPNHLPLHTYCFENISQFAD-------RPCIINGPTGDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQ 85 (415)
Q Consensus 20 ~~~~~~tl~~~l~~~a~~~p~-------~~a~~~~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~ 85 (415)
..|+..|+.+++..-..++|. ...+.-+ ++.++ .+.-++.||.|+++.+
T Consensus 21 ~~~~~~tv~~ll~~l~~~~~~~~~~~~~~~~v~vN--g~~v~---------------~~~~l~~gD~v~i~pp 76 (80)
T cd00754 21 ELPEGATVGELLDALEARYPGLLEELLARVRIAVN--GEYVR---------------LDTPLKDGDEVAIIPP 76 (80)
T ss_pred ECCCCCcHHHHHHHHHHHCchHHHhhhhcEEEEEC--CeEcC---------------CCcccCCCCEEEEeCC
Confidence 445578999999988887765 2222222 33333 2234788999998876
No 362
>TIGR02822 adh_fam_2 zinc-binding alcohol dehydrogenase family protein. Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). The gene neighborhood of members of this family is not conserved and it appears that no members are characterized. The sequence of the family includes 6 invariant cysteine residues and one invariant histidine. It appears that no member is characterized.
Probab=25.11 E-value=2.7e+02 Score=25.49 Aligned_cols=58 Identities=17% Similarity=0.020 Sum_probs=38.0
Q ss_pred HHHcCCCCCCEEEEEcCCchhHHHHHHHHHHhCCeEeecCCCCCHHHHHHHHHhcCceEEEE
Q 014952 69 LSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGATSTTANPFYTPPEIAKQAIASKAKIIIT 130 (415)
Q Consensus 69 L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~vl~ 130 (415)
+.+.++++|++|+|...-..-..++.+|- ..|+.++.+..+ .+ ...++.+.+++.++.
T Consensus 158 ~~~~~~~~g~~VlV~G~g~iG~~a~~~a~-~~G~~vi~~~~~--~~-~~~~a~~~Ga~~vi~ 215 (329)
T TIGR02822 158 LLRASLPPGGRLGLYGFGGSAHLTAQVAL-AQGATVHVMTRG--AA-ARRLALALGAASAGG 215 (329)
T ss_pred HHhcCCCCCCEEEEEcCCHHHHHHHHHHH-HCCCeEEEEeCC--hH-HHHHHHHhCCceecc
Confidence 44467899999999987666655555544 468765555432 23 356677788877664
No 363
>PF00818 Ice_nucleation: Ice nucleation protein repeat; InterPro: IPR000258 Certain Gram-negative bacteria express proteins that enable them to promote nucleation of ice at relatively high temperatures (above -5C) [, ]. These proteins are localised at the outer membrane surface and can cause frost damage to many plants. The primary structure of the proteins contains a highly repetitive domain that dominates the sequence. The domain comprises a number of 48-residue repeats, which themselves contain 3 blocks of 16 residues, the first 8 of which are identical. It is thought that the repetitive domain may be responsible for aligning water molecules in the seed crystal. [.........48.residues.repeated.domain..........] / / | | \ \ AGYGSTxTagxxssli AGYGSTxTagxxsxlt AGYGSTxTaqxxsxlt [16.residues...] [16.residues...] [16.residues...] ; GO: 0009279 cell outer membrane
Probab=24.86 E-value=36 Score=15.57 Aligned_cols=9 Identities=44% Similarity=0.863 Sum_probs=6.8
Q ss_pred ccccccCCc
Q 014952 333 GYGMTEAGP 341 (415)
Q Consensus 333 ~YG~tE~~~ 341 (415)
.||+|++.+
T Consensus 1 GYGSTqTA~ 9 (16)
T PF00818_consen 1 GYGSTQTAG 9 (16)
T ss_pred CCCcccccC
Confidence 488888764
No 364
>TIGR00623 sula cell division inhibitor SulA. All proteins in this family for which the functions are known are cell division inhibitors. In E. coli, SulA is one of the SOS regulated genes.
Probab=24.39 E-value=2.7e+02 Score=22.76 Aligned_cols=35 Identities=14% Similarity=0.056 Sum_probs=15.2
Q ss_pred HHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHHhC
Q 014952 67 AGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIG 101 (415)
Q Consensus 67 ~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G 101 (415)
.+|.+.|+.....+.|.-.+..+.+-+.-=|++.|
T Consensus 75 ~~L~~~Gl~l~rvlli~~~~~~d~lwa~EQaLrSG 109 (168)
T TIGR00623 75 EWVQSSGLPLTKVMQISQLSPCNTVESMIRALRTG 109 (168)
T ss_pred HHHHHcCCChhHEEEEecCCchhHHHHHHHHHHhC
Confidence 34455555444433443334444444444444444
No 365
>PRK08091 ribulose-phosphate 3-epimerase; Validated
Probab=24.35 E-value=4.7e+02 Score=22.68 Aligned_cols=66 Identities=12% Similarity=0.032 Sum_probs=47.1
Q ss_pred HHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHHhCC---eEeecCCCCCHHHHHHHHHhcCceEEEEc
Q 014952 63 RKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGA---TSTTANPFYTPPEIAKQAIASKAKIIITQ 131 (415)
Q Consensus 63 ~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~---~~v~l~~~~~~~~~~~~l~~~~~~~vl~~ 131 (415)
.++...+.+.| .|.|.+..+.+.+..-++--+.+.|+ +-+.++|..+.+.+..++...+..++.+-
T Consensus 81 ~~~i~~~~~aG---ad~It~H~Ea~~~~~~~l~~Ik~~g~~~kaGlalnP~Tp~~~i~~~l~~vD~VLiMtV 149 (228)
T PRK08091 81 FEVAKACVAAG---ADIVTLQVEQTHDLALTIEWLAKQKTTVLIGLCLCPETPISLLEPYLDQIDLIQILTL 149 (228)
T ss_pred HHHHHHHHHhC---CCEEEEcccCcccHHHHHHHHHHCCCCceEEEEECCCCCHHHHHHHHhhcCEEEEEEE
Confidence 33444555554 46799999876665555666777784 66778999899999999988777776654
No 366
>PRK09422 ethanol-active dehydrogenase/acetaldehyde-active reductase; Provisional
Probab=24.27 E-value=4.8e+02 Score=23.66 Aligned_cols=60 Identities=12% Similarity=0.047 Sum_probs=40.0
Q ss_pred HHHcCCCCCCEEEEEcCCchhHHHHHHHHHHhCCeEeecCCCCCHHHHHHHHHhcCceEEEEc
Q 014952 69 LSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGATSTTANPFYTPPEIAKQAIASKAKIIITQ 131 (415)
Q Consensus 69 L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~vl~~ 131 (415)
+...++++|++|+|.....+-..++.+|....|+.++.+.. +.+ ....+.+.+.+.++..
T Consensus 155 ~~~~~~~~g~~vlV~g~g~vG~~~~~la~~~~g~~v~~~~~--~~~-~~~~~~~~g~~~v~~~ 214 (338)
T PRK09422 155 IKVSGIKPGQWIAIYGAGGLGNLALQYAKNVFNAKVIAVDI--NDD-KLALAKEVGADLTINS 214 (338)
T ss_pred HHhcCCCCCCEEEEECCcHHHHHHHHHHHHhCCCeEEEEeC--ChH-HHHHHHHcCCcEEecc
Confidence 33457899999999987667777777777656877666643 223 3444466777666554
No 367
>TIGR02991 ectoine_eutB ectoine utilization protein EutB. Members of this protein family are EutB, a predicted arylmalonate decarboxylase found in a conserved ectoine utilization operon of species that include Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti, Silicibacter pomeroyi, Agrobacterium tumefaciens, and Pseudomonas putida. Members of this family resemble threonine dehydratases.
Probab=24.25 E-value=5.5e+02 Score=23.45 Aligned_cols=53 Identities=11% Similarity=-0.034 Sum_probs=40.6
Q ss_pred EcCCchhHHHHHHHHHHhCCeEeecCCCCCHHHHHHHHHhcCceEEEEcccch
Q 014952 83 LLQNCPQFVFAFLGASYIGATSTTANPFYTPPEIAKQAIASKAKIIITQAVYN 135 (415)
Q Consensus 83 ~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~vl~~~~~~ 135 (415)
....+-.-....++|...|..+..+-|...++.....++..++++++++....
T Consensus 72 ~aSsGN~g~alA~~a~~~G~~~~v~~p~~~~~~k~~~~~~~GA~V~~~~~~~~ 124 (317)
T TIGR02991 72 AASTGNHGRALAYAAAEEGVRATICMSELVPQNKVDEIRRLGAEVRIVGRSQD 124 (317)
T ss_pred EECCCHHHHHHHHHHHHhCCCEEEEcCCCCCHHHHHHHHHcCCEEEEeCCCHH
Confidence 33445556666778888998887777777777788889999999999987533
No 368
>PF01053 Cys_Met_Meta_PP: Cys/Met metabolism PLP-dependent enzyme; InterPro: IPR000277 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent enzymes involved in the metabolism of cysteine, homocysteine and methionine have been shown [, ] to be evolutionary related. These enzymes are proteins of about 400 amino-acid residues. The pyridoxal-P group is attached to a lysine residue located in the central section of these enzymes.; GO: 0030170 pyridoxal phosphate binding, 0006520 cellular amino acid metabolic process; PDB: 1PFF_A 2NMP_A 3ELP_B 3COG_C 1CS1_A 1E5E_B 3RI6_A 1E5F_A 2FQ6_B 1CL2_B ....
Probab=24.05 E-value=4.8e+02 Score=24.77 Aligned_cols=84 Identities=10% Similarity=0.134 Sum_probs=53.9
Q ss_pred EEEcCCchhHH-HHHHHHHHhCCeEeecCCCCCH--HHHHHHHHhcCceEEEEcccchHHHHhhhhhcCceEEEeCCCC-
Q 014952 81 MLLLQNCPQFV-FAFLGASYIGATSTTANPFYTP--PEIAKQAIASKAKIIITQAVYNDKVRDLSEHHGARIVTIDPPP- 156 (415)
Q Consensus 81 ~i~~~~~~~~~-~~~lA~~~~G~~~v~l~~~~~~--~~~~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~i~~~~~~- 156 (415)
++..+.+...+ .+++++.+.|-.++..+.-+.. .-+...+...+..+.+++....+.+...... +.+.|.++...
T Consensus 73 a~~~~SGmaAi~~~l~~ll~~Gd~iv~~~~~Y~~t~~~~~~~l~~~gv~v~~~d~~d~~~l~~~l~~-~t~~v~~EspsN 151 (386)
T PF01053_consen 73 ALLFSSGMAAISAALLALLKPGDHIVASDDLYGGTYRLLEELLPRFGVEVTFVDPTDLEALEAALRP-NTKLVFLESPSN 151 (386)
T ss_dssp EEEESSHHHHHHHHHHHHS-TTBEEEEESSSSHHHHHHHHHCHHHTTSEEEEESTTSHHHHHHHHCT-TEEEEEEESSBT
T ss_pred eeeccchHHHHHHHHHhhcccCCceEecCCccCcchhhhhhhhcccCcEEEEeCchhHHHHHhhccc-cceEEEEEcCCC
Confidence 34456677776 7888899999888877766554 4466677888999999988777766665443 45566665432
Q ss_pred --CCccchhhh
Q 014952 157 --ENCLHFSEL 165 (415)
Q Consensus 157 --~~~~~~~~l 165 (415)
-...+++.+
T Consensus 152 P~l~v~Dl~~i 162 (386)
T PF01053_consen 152 PTLEVPDLEAI 162 (386)
T ss_dssp TTTB---HHHH
T ss_pred cccccccHHHH
Confidence 234444444
No 369
>PRK08197 threonine synthase; Validated
Probab=24.04 E-value=3.7e+02 Score=25.55 Aligned_cols=89 Identities=15% Similarity=0.095 Sum_probs=53.5
Q ss_pred CcEEEeCCCCCeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHHhCCeEeecCCCCCHHHHHHHH
Q 014952 41 RPCIINGPTGDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGATSTTANPFYTPPEIAKQA 120 (415)
Q Consensus 41 ~~a~~~~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l 120 (415)
++.+-.+..+-+-||++-.... .++. ..+.|. +.|.. ...+-.-....+++.++|.-+..+-|....+.....+
T Consensus 96 ~l~~K~E~~nPtGSfKdRga~~-~i~~-a~~~g~---~~vv~-aSsGN~g~alA~~aa~~G~~~~v~vp~~~~~~k~~~~ 169 (394)
T PRK08197 96 RLWVKDEGLNPTGSFKARGLAV-GVSR-AKELGV---KHLAM-PTNGNAGAAWAAYAARAGIRATIFMPADAPEITRLEC 169 (394)
T ss_pred cEEEEeCCCCCCcCcHHhHHHH-HHHH-HHHcCC---CEEEE-eCCcHHHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHH
Confidence 4555555444566666654322 2222 334443 23433 3344445555566677888777777766667778899
Q ss_pred HhcCceEEEEcccch
Q 014952 121 IASKAKIIITQAVYN 135 (415)
Q Consensus 121 ~~~~~~~vl~~~~~~ 135 (415)
+..+++++.++.+..
T Consensus 170 ~~~GA~Vi~v~~~~~ 184 (394)
T PRK08197 170 ALAGAELYLVDGLIS 184 (394)
T ss_pred HHcCCEEEEECCCHH
Confidence 999999999976543
No 370
>TIGR01501 MthylAspMutase methylaspartate mutase, S subunit. This model represents the S (sigma) subunit of methylaspartate mutase (glutamate mutase), a cobalamin-dependent enzyme that catalyzes the first step in a pathway of glutamate fermentation.
Probab=24.03 E-value=2.3e+02 Score=22.17 Aligned_cols=95 Identities=8% Similarity=0.029 Sum_probs=52.2
Q ss_pred HHHHhhHHHHHHHHHcCcEEEEcC-CCCHHHHHHHHHhcCceeeecchH------HHHHHHcCCCCCCCCcccceeeeec
Q 014952 237 FHIYSLNSVLLCALRVGAAILIMQ-KFDIVKLMELVQKYKVTVAPFVPP------IVLAVAKSGDVDKYDMSSIRTVMSG 309 (415)
Q Consensus 237 ~~~~g~~~~~l~~l~~G~~~v~~~-~~~~~~~~~~l~~~~~t~l~~~p~------~l~~l~~~~~~~~~~l~~lr~v~~g 309 (415)
.|..|.-......-..|..++... ..+++.+.+...+++++.+....- .+..+.+..+.+ .+... .++.|
T Consensus 13 ~HdiGk~iv~~~l~~~GfeVi~LG~~v~~e~~v~aa~~~~adiVglS~l~~~~~~~~~~~~~~l~~~--gl~~~-~vivG 89 (134)
T TIGR01501 13 CHAVGNKILDHAFTNAGFNVVNLGVLSPQEEFIKAAIETKADAILVSSLYGHGEIDCKGLRQKCDEA--GLEGI-LLYVG 89 (134)
T ss_pred hhhHhHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEecccccCHHHHHHHHHHHHHC--CCCCC-EEEec
Confidence 455565432333345677776664 468899999999999988765331 122332222111 23333 36778
Q ss_pred CCC-CCHHHHH----HHHhhCCCCcccccccccc
Q 014952 310 AAP-MGKELED----AVRAKLPHAKLGQGYGMTE 338 (415)
Q Consensus 310 G~~-l~~~~~~----~~~~~~~~~~~~~~YG~tE 338 (415)
|.. ++++..+ ++++. | +-..||.+.
T Consensus 90 G~~vi~~~d~~~~~~~l~~~--G--v~~vF~pgt 119 (134)
T TIGR01501 90 GNLVVGKQDFPDVEKRFKEM--G--FDRVFAPGT 119 (134)
T ss_pred CCcCcChhhhHHHHHHHHHc--C--CCEEECcCC
Confidence 764 5554443 45443 3 455566544
No 371
>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase. Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.
Probab=23.93 E-value=3.2e+02 Score=25.15 Aligned_cols=59 Identities=14% Similarity=0.239 Sum_probs=38.4
Q ss_pred HHHcCCCCCCEEEEEcCCchhHHHHHHHHHHhCCeEeecCCCCCHHHHHHHHHhcCceEEEEc
Q 014952 69 LSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGATSTTANPFYTPPEIAKQAIASKAKIIITQ 131 (415)
Q Consensus 69 L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~vl~~ 131 (415)
+.+.++++|++|+|...-.+-..++.+|-. .|+.++.++. +.+.+ ..+.+.+++.++..
T Consensus 159 ~~~~~~~~g~~VlV~G~G~vG~~a~~~a~~-~G~~vi~~~~--~~~~~-~~~~~~Ga~~~i~~ 217 (349)
T TIGR03201 159 AVQAGLKKGDLVIVIGAGGVGGYMVQTAKA-MGAAVVAIDI--DPEKL-EMMKGFGADLTLNP 217 (349)
T ss_pred HHhcCCCCCCEEEEECCCHHHHHHHHHHHH-cCCeEEEEcC--CHHHH-HHHHHhCCceEecC
Confidence 344678999999999986666666666655 5876555543 33443 45566777666643
No 372
>TIGR01747 diampropi_NH3ly diaminopropionate ammonia-lyase family. This small subfamily includes diaminopropionate ammonia-lyase from Salmonella typhimurium and a small number of close homologs, about 50 % identical in sequence. The enzyme is a pyridoxal phosphate-binding homodimer homologous to threonine dehydratase (threonine deaminase).
Probab=23.86 E-value=3.5e+02 Score=25.52 Aligned_cols=58 Identities=16% Similarity=0.087 Sum_probs=44.3
Q ss_pred EEEEEcCCchhHHHHHHHHHHhCCeEeecCCCCCHHHHHHHHHhcCceEEEEcccchH
Q 014952 79 VIMLLLQNCPQFVFAFLGASYIGATSTTANPFYTPPEIAKQAIASKAKIIITQAVYND 136 (415)
Q Consensus 79 ~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~vl~~~~~~~ 136 (415)
.-.+....+-.-..+.+++...|..+..+-|...++.....++..+++++++.....+
T Consensus 95 ~~vv~aSsGN~g~a~A~~Aa~~G~~~~I~vP~~~~~~k~~~i~~~GAeVi~v~~~~~~ 152 (376)
T TIGR01747 95 ATFATATDGNHGRGVAWAAQQLGQKAVVYMPKGSAQERVENILNLGAECTITDMNYDD 152 (376)
T ss_pred CEEEEECccHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHhCCCEEEEECCCHHH
Confidence 3445555566667777888899988888777777778888899999999999865443
No 373
>COG2897 SseA Rhodanese-related sulfurtransferase [Inorganic ion transport and metabolism]
Probab=23.69 E-value=1.8e+02 Score=26.14 Aligned_cols=55 Identities=11% Similarity=0.182 Sum_probs=43.9
Q ss_pred CeeeHHHHHHH-----H-HHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHHhCCeEe
Q 014952 51 DVYTYADVELT-----S-RKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGATST 105 (415)
Q Consensus 51 ~~~Ty~el~~~-----~-~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v 105 (415)
..+.|.++.+. + ..++..+...|+.+.+.|.++|..+...-...||+..+|...+
T Consensus 202 iNipw~~~~~~~~~~~~~~~~~~l~~~~gi~~~~~vI~yCgsG~~As~~~~al~~lg~~~~ 262 (285)
T COG2897 202 INIPWTDLVDDGGLFKSPEEIARLYADAGIDPDKEVIVYCGSGVRASVTWLALAELGGPNN 262 (285)
T ss_pred cCcCHHHHhcCCCccCcHHHHHHHHHhcCCCCCCCEEEEcCCchHHHHHHHHHHHhCCCCc
Confidence 45788888772 2 2334444468999999999999999999999999999998865
No 374
>cd06451 AGAT_like Alanine-glyoxylate aminotransferase (AGAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to alanine-glyoxylate aminotransferase (AGAT), serine-glyoxylate aminotransferase (SGAT), and 3-hydroxykynurenine transaminase (HKT). AGAT is a homodimeric protein, which catalyses the transamination of glyoxylate to glycine, and SGAT converts serine and glyoxylate to hydroxypyruvate and glycine. HKT catalyzes the PLP-dependent transamination of 3-hydroxykynurenine, a potentially toxic metabolite of the kynurenine pathway.
Probab=23.56 E-value=5.8e+02 Score=23.41 Aligned_cols=13 Identities=8% Similarity=0.189 Sum_probs=7.0
Q ss_pred eeeechHHHHHHH
Q 014952 199 GVMLTHKGLVTSV 211 (415)
Q Consensus 199 ~v~~t~~~l~~~~ 211 (415)
|+.+....+...+
T Consensus 195 G~l~~~~~~~~~~ 207 (356)
T cd06451 195 GPIAFSERALERI 207 (356)
T ss_pred ceeEECHHHHHHH
Confidence 5565555555443
No 375
>PLN02723 3-mercaptopyruvate sulfurtransferase
Probab=23.22 E-value=1.8e+02 Score=26.63 Aligned_cols=47 Identities=15% Similarity=0.089 Sum_probs=34.8
Q ss_pred HHHHHHHHHcCCCCCCEEEEEcCCchhH-HHHHHHHHHhCCe-EeecCC
Q 014952 63 RKVAAGLSKLGVQKGDVIMLLLQNCPQF-VFAFLGASYIGAT-STTANP 109 (415)
Q Consensus 63 ~~~a~~L~~~g~~~g~~V~i~~~~~~~~-~~~~lA~~~~G~~-~v~l~~ 109 (415)
..++..|.++|+.+.+.|.+++.++..+ .-+.+.+..+|.. +..++-
T Consensus 89 ~~~~~~l~~~Gi~~~~~VVvY~~~g~~~a~r~~~~L~~~G~~~V~~LdG 137 (320)
T PLN02723 89 EAFAAAVSALGIENKDGVVVYDGKGIFSAARVWWMFRVFGHEKVWVLDG 137 (320)
T ss_pred HHHHHHHHHcCCCCCCEEEEEcCCCcchHHHHHHHHHHcCCCceEEcCC
Confidence 6678889999999999999998776443 3445777888875 334554
No 376
>PRK11493 sseA 3-mercaptopyruvate sulfurtransferase; Provisional
Probab=22.78 E-value=1.9e+02 Score=25.83 Aligned_cols=48 Identities=13% Similarity=0.122 Sum_probs=34.9
Q ss_pred HHHHHHHHHHHcCCCCCCEEEEEcCCchh-HHHHHHHHHHhCCe-EeecC
Q 014952 61 TSRKVAAGLSKLGVQKGDVIMLLLQNCPQ-FVFAFLGASYIGAT-STTAN 108 (415)
Q Consensus 61 ~~~~~a~~L~~~g~~~g~~V~i~~~~~~~-~~~~~lA~~~~G~~-~v~l~ 108 (415)
....+...|.+.|+.+++.|.+++..... ...+.+.+...|.. +..++
T Consensus 71 ~~~~~~~~~~~~Gi~~d~~VVvyc~~~~~~a~~~~~~l~~~G~~~v~~l~ 120 (281)
T PRK11493 71 RPETFAVAMRELGVNQDKHLVVYDEGNLFSAPRAWWMLRTFGVEKVSILA 120 (281)
T ss_pred CHHHHHHHHHHcCCCCCCEEEEECCCCCchHHHHHHHHHHhcCCcEEEcC
Confidence 35678888999999999999999986543 33455677788865 33444
No 377
>PRK02991 D-serine dehydratase; Provisional
Probab=22.67 E-value=4.2e+02 Score=25.67 Aligned_cols=57 Identities=5% Similarity=-0.115 Sum_probs=44.5
Q ss_pred EEEcCCchhHHHHHHHHHHhCCeEeecCCCCCHHHHHHHHHhcCceEEEEcccchHH
Q 014952 81 MLLLQNCPQFVFAFLGASYIGATSTTANPFYTPPEIAKQAIASKAKIIITQAVYNDK 137 (415)
Q Consensus 81 ~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~vl~~~~~~~~ 137 (415)
.+....+-.-..+.+++..+|..+..+-|...++.....++..+++++++.....+.
T Consensus 160 VV~aSsGN~G~alA~aA~~~G~~~tIvvP~~a~~~K~~~ir~~GAeVi~~~~~~~~a 216 (441)
T PRK02991 160 IAVGSTGNLGLSIGIMSAALGFKVTVHMSADARQWKKDKLRSHGVTVVEYEGDYGVA 216 (441)
T ss_pred EEEECCcHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHhCCCEEEEECCCHHHH
Confidence 344455556667778888899888888888888888899999999999998765443
No 378
>PRK07591 threonine synthase; Validated
Probab=22.50 E-value=4e+02 Score=25.63 Aligned_cols=89 Identities=11% Similarity=0.068 Sum_probs=57.9
Q ss_pred CcEEEeCCCCCeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHHhCCeEeecCCCCCHHHHHHHH
Q 014952 41 RPCIINGPTGDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGATSTTANPFYTPPEIAKQA 120 (415)
Q Consensus 41 ~~a~~~~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l 120 (415)
++.+-++..+.+-||++-.. +..++ ...+.|. +.| +....+-.-..+..++.++|..+..+-|..........+
T Consensus 106 ~l~~K~E~~nPtGSfKdRga-~~~v~-~A~~~g~---~~v-v~aSsGN~g~alA~~aa~~Gl~~~I~vP~~~~~~k~~~~ 179 (421)
T PRK07591 106 NLYIKDDSVNPTHSFKDRVV-SVALT-AARELGF---TTV-ACASTGNLANSVAAHAARAGLDSCVFIPADLEAGKIVGT 179 (421)
T ss_pred cEEEEeCCCCCccChHHHHH-HHHHH-HHHHcCC---CEE-EEeCCCHHHHHHHHHHHHcCCCEEEEEcCCCCHHHHHHH
Confidence 56666654456678877422 22222 2334453 345 444556566666777788998888777776666677888
Q ss_pred HhcCceEEEEcccch
Q 014952 121 IASKAKIIITQAVYN 135 (415)
Q Consensus 121 ~~~~~~~vl~~~~~~ 135 (415)
+..++++++++.+..
T Consensus 180 ~~~GA~Vi~v~g~~d 194 (421)
T PRK07591 180 LVYGPTLVAVDGNYD 194 (421)
T ss_pred HHcCCEEEEECCCHH
Confidence 999999999987543
No 379
>PRK07048 serine/threonine dehydratase; Validated
Probab=22.39 E-value=5.5e+02 Score=23.46 Aligned_cols=53 Identities=11% Similarity=0.099 Sum_probs=41.7
Q ss_pred EEcCCchhHHHHHHHHHHhCCeEeecCCCCCHHHHHHHHHhcCceEEEEcccc
Q 014952 82 LLLQNCPQFVFAFLGASYIGATSTTANPFYTPPEIAKQAIASKAKIIITQAVY 134 (415)
Q Consensus 82 i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~vl~~~~~ 134 (415)
+....+-.-....++|...|..+..+-|...++.....++..++++++++...
T Consensus 76 v~aSsGN~g~alA~~a~~~G~~~~vvvp~~~~~~k~~~~~~~GAeV~~~~~~~ 128 (321)
T PRK07048 76 VTFSSGNHAQAIALSARLLGIPATIVMPQDAPAAKVAATRGYGGEVVTYDRYT 128 (321)
T ss_pred EEeCCCHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHCCCEEEEECCCH
Confidence 33445666777778889999888888777777888889999999999998643
No 380
>TIGR00936 ahcY adenosylhomocysteinase. This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704).
Probab=22.35 E-value=7e+02 Score=23.91 Aligned_cols=55 Identities=18% Similarity=0.122 Sum_probs=40.3
Q ss_pred CCCCEEEEEcCCchhHHHHHHHHHHhCCeEeec--CCCCCHHHHHHHHHhcCceEEE
Q 014952 75 QKGDVIMLLLQNCPQFVFAFLGASYIGATSTTA--NPFYTPPEIAKQAIASKAKIII 129 (415)
Q Consensus 75 ~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l--~~~~~~~~~~~~l~~~~~~~vl 129 (415)
=+|-+|+.+.+=..+..+.+..+..+|+-+... ||..+.++....|...+..+.-
T Consensus 30 l~G~~i~~~~hl~~~Ta~l~~~L~~~GA~v~~~~~np~stqd~vaaaL~~~gi~v~a 86 (406)
T TIGR00936 30 LKGARIAACLHVTVETAVLIETLVAGGAEVAWTSCNPLSTQDDVAAALAKAGIPVFA 86 (406)
T ss_pred CCCCEEEEEEechHHHHHHHHHHHHcCCEEEEEccCCccccHHHHHHHHhCCceEEE
Confidence 357788888888888888888888888765544 6777777777777777766554
No 381
>cd02069 methionine_synthase_B12_BD B12 binding domain of methionine synthase. This domain binds methylcobalamin, which it uses as an intermediate methyl carrier from methyltetrahydrofolate (CH3H4folate) to homocysteine (Hcy).
Probab=22.04 E-value=5e+02 Score=22.15 Aligned_cols=92 Identities=15% Similarity=0.177 Sum_probs=0.0
Q ss_pred CCCcEEEEccch-HHHHhhHHHHHHHHHcCcEEEEcCC-CCHHHHHHHHHhcCceeeec------chHHHHHHHcCCCCC
Q 014952 225 HKEDVILCVLPL-FHIYSLNSVLLCALRVGAAILIMQK-FDIVKLMELVQKYKVTVAPF------VPPIVLAVAKSGDVD 296 (415)
Q Consensus 225 ~~~~~~~~~~pl-~~~~g~~~~~l~~l~~G~~~v~~~~-~~~~~~~~~l~~~~~t~l~~------~p~~l~~l~~~~~~~ 296 (415)
..+..++...+- .|..|....-...-..|-.++..-. ..++.+.+.+.+++++++.+ +-..+..+++.....
T Consensus 87 ~~~~vvl~t~~gd~HdiG~~iv~~~l~~~G~~Vi~LG~~vp~e~~v~~~~~~~~~~V~lS~~~~~~~~~~~~~i~~L~~~ 166 (213)
T cd02069 87 SKGKIVLATVKGDVHDIGKNLVGVILSNNGYEVIDLGVMVPIEKILEAAKEHKADIIGLSGLLVPSLDEMVEVAEEMNRR 166 (213)
T ss_pred CCCeEEEEeCCCchhHHHHHHHHHHHHhCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEccchhccHHHHHHHHHHHHhc
Q ss_pred CCCcccceeeeecCCCCCHHHHHH
Q 014952 297 KYDMSSIRTVMSGAAPMGKELEDA 320 (415)
Q Consensus 297 ~~~l~~lr~v~~gG~~l~~~~~~~ 320 (415)
..+.+ ++.||.+++++..+.
T Consensus 167 ~~~~~----i~vGG~~~~~~~~~~ 186 (213)
T cd02069 167 GIKIP----LLIGGAATSRKHTAV 186 (213)
T ss_pred CCCCe----EEEEChhcCHHHHhh
No 382
>PLN02238 hypoxanthine phosphoribosyltransferase
Probab=21.78 E-value=2.5e+02 Score=23.42 Aligned_cols=50 Identities=16% Similarity=0.106 Sum_probs=30.9
Q ss_pred CeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHHhCC
Q 014952 51 DVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGA 102 (415)
Q Consensus 51 ~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~ 102 (415)
.-+||.|+.+++.++|..+.+. .+....+.+...++--.+++.++ ..+|.
T Consensus 10 ~lis~~~I~~~i~~lA~~I~~~-~~~~~~vivgi~~Gg~~fa~~L~-~~L~~ 59 (189)
T PLN02238 10 VLWTAEDISARVAELAAQIASD-YAGKSPVVLGVATGAFMFLADLV-RAIQP 59 (189)
T ss_pred EEcCHHHHHHHHHHHHHHHHHH-cCCCCcEEEEEccCCHHHHHHHH-HHhCc
Confidence 4689999999999999999885 22112344444444444444443 33443
No 383
>cd01121 Sms Sms (bacterial radA) DNA repair protein. This protein is not related to archael radA any more than is to other RecA-like NTPases. Sms has a role in recombination and recombinational repair and is responsible for the stabilization or processing of branched DNA molecules.
Probab=21.77 E-value=6.8e+02 Score=23.60 Aligned_cols=82 Identities=16% Similarity=0.125 Sum_probs=50.2
Q ss_pred CCCCCCEEEEEcCCch--hHHHHHHHHH--HhCCeEeecCCCCCHHHHHHHHHhcC---ceEEEEcccchHHHHhhhhhc
Q 014952 73 GVQKGDVIMLLLQNCP--QFVFAFLGAS--YIGATSTTANPFYTPPEIAKQAIASK---AKIIITQAVYNDKVRDLSEHH 145 (415)
Q Consensus 73 g~~~g~~V~i~~~~~~--~~~~~~lA~~--~~G~~~v~l~~~~~~~~~~~~l~~~~---~~~vl~~~~~~~~~~~~~~~~ 145 (415)
|+.+|..+.+..+++. ..++..+|.. +.|..++.+....+.+++.....+.+ ..+.+..+...+.+.+.....
T Consensus 78 Gi~~GslvLI~G~pG~GKStLllq~a~~~a~~g~~VlYvs~EEs~~qi~~Ra~rlg~~~~~l~l~~e~~le~I~~~i~~~ 157 (372)
T cd01121 78 GLVPGSVILIGGDPGIGKSTLLLQVAARLAKRGGKVLYVSGEESPEQIKLRADRLGISTENLYLLAETNLEDILASIEEL 157 (372)
T ss_pred CccCCeEEEEEeCCCCCHHHHHHHHHHHHHhcCCeEEEEECCcCHHHHHHHHHHcCCCcccEEEEccCcHHHHHHHHHhc
Confidence 8999999999999763 3344444433 34456666776667777666555543 234444444555555554455
Q ss_pred CceEEEeCC
Q 014952 146 GARIVTIDP 154 (415)
Q Consensus 146 ~~~~i~~~~ 154 (415)
..+++++|.
T Consensus 158 ~~~lVVIDS 166 (372)
T cd01121 158 KPDLVIIDS 166 (372)
T ss_pred CCcEEEEcc
Confidence 667777764
No 384
>PRK09629 bifunctional thiosulfate sulfurtransferase/phosphatidylserine decarboxylase; Provisional
Probab=21.67 E-value=1.8e+02 Score=29.49 Aligned_cols=42 Identities=19% Similarity=0.267 Sum_probs=36.3
Q ss_pred HHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHHhCCe
Q 014952 62 SRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGAT 103 (415)
Q Consensus 62 ~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~ 103 (415)
.+.+...|.+.|+.+++.|.++|..+...-.+.+++..+|..
T Consensus 208 ~~el~~~~~~~Gi~~~~~VVvYC~sG~rAa~~~~~L~~lG~~ 249 (610)
T PRK09629 208 RQDMPEILRDLGITPDKEVITHCQTHHRSGFTYLVAKALGYP 249 (610)
T ss_pred HHHHHHHHHHcCCCCCCCEEEECCCChHHHHHHHHHHHcCCC
Confidence 345777788889999999999999998888889999999986
No 385
>PRK09177 xanthine-guanine phosphoribosyltransferase; Validated
Probab=21.52 E-value=1.5e+02 Score=23.82 Aligned_cols=47 Identities=19% Similarity=0.183 Sum_probs=29.6
Q ss_pred eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHHhCC
Q 014952 52 VYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGA 102 (415)
Q Consensus 52 ~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~ 102 (415)
-+||.|+.+.++++|..+.+.| + -+.| +...++--.+...++-. +|.
T Consensus 9 ~is~~~i~~~i~~la~~I~~~~-~-~d~v-vgv~~GG~~fa~~L~~~-L~~ 55 (156)
T PRK09177 9 PVSWDQLHRDARALAWRLLPAG-Q-WKGI-IAVTRGGLVPAAILARE-LGI 55 (156)
T ss_pred EcCHHHHHHHHHHHHHHHHhhC-C-CCEE-EEEecCCeehHHHHHHH-cCC
Confidence 5799999999999999998864 2 3444 33333433333344333 443
No 386
>PF05221 AdoHcyase: S-adenosyl-L-homocysteine hydrolase; InterPro: IPR000043 Adenosylhomocysteinase (S-adenosyl-L-homocysteine hydrolase, 3.3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. This enzyme is ubiquitous, highly conserved, and may play a key role in the regulation of the intracellular concentration of adenosylhomocysteine. AdoHcyase requires NAD+ as a cofactor and contains a central glycine-rich region which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity, 0006730 one-carbon metabolic process; PDB: 3N58_B 3H9U_C 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 1K0U_F 1B3R_A 1XWF_D ....
Probab=21.26 E-value=5.4e+02 Score=22.92 Aligned_cols=57 Identities=18% Similarity=0.099 Sum_probs=41.7
Q ss_pred CCCCCEEEEEcCCchhHHHHHHHHHHhCCeEe--ecCCCCCHHHHHHHHHhcCceEEEE
Q 014952 74 VQKGDVIMLLLQNCPQFVFAFLGASYIGATST--TANPFYTPPEIAKQAIASKAKIIIT 130 (415)
Q Consensus 74 ~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v--~l~~~~~~~~~~~~l~~~~~~~vl~ 130 (415)
-=+|-+|+.++.-..+..+.+..+..+|+-+. .-||.++.++....|.+.+..+.-.
T Consensus 40 Pl~G~rIa~cLHle~kTA~L~~tL~a~GAeV~~~~sNplSTQDdvaAAL~~~Gi~V~A~ 98 (268)
T PF05221_consen 40 PLKGARIAGCLHLEAKTAVLAETLKALGAEVRWTGSNPLSTQDDVAAALAEEGIPVFAW 98 (268)
T ss_dssp TTTTEEEEEES--SHHHHHHHHHHHHTTEEEEEEESSTTT--HHHHHHHHHTTEEEEE-
T ss_pred CCCCCEEEEEEechHHHHHHHHHHHHcCCeEEEecCCCcccchHHHHHhccCCceEEEe
Confidence 34688999999999999999999998998654 5578888888888888877765443
No 387
>PRK05973 replicative DNA helicase; Provisional
Probab=21.23 E-value=3.2e+02 Score=23.85 Aligned_cols=89 Identities=17% Similarity=0.131 Sum_probs=56.8
Q ss_pred CCCCHHhHHHhhhccCCCCcEEEeCCCCCeeeHHHHHHHHHH--HHHHHHHcCCCCCCEEEEEcCCch--hHHHHHH--H
Q 014952 23 NHLPLHTYCFENISQFADRPCIINGPTGDVYTYADVELTSRK--VAAGLSKLGVQKGDVIMLLLQNCP--QFVFAFL--G 96 (415)
Q Consensus 23 ~~~tl~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~--~a~~L~~~g~~~g~~V~i~~~~~~--~~~~~~l--A 96 (415)
...++++.+++.|++.+ --+|.-|...+.. -+..|.. |+.+|+.+.|..+.+. ..++..+ .
T Consensus 21 ~~~~~~~~~~~~a~~~g------------~~~w~~~~~~~~~~~p~~~l~G-Gl~~Gsl~LIaG~PG~GKT~lalqfa~~ 87 (237)
T PRK05973 21 QNIPLHEALDRIAAEEG------------FSSWSLLAAKAAATTPAEELFS-QLKPGDLVLLGARPGHGKTLLGLELAVE 87 (237)
T ss_pred cCCcHHHHHHHHHHHhc------------cchHHHHHHhccCCCCHHHhcC-CCCCCCEEEEEeCCCCCHHHHHHHHHHH
Confidence 45778888888776642 2234444444332 3444443 9999999999999762 2222222 2
Q ss_pred HHHhCCeEeecCCCCCHHHHHHHHHhcC
Q 014952 97 ASYIGATSTTANPFYTPPEIAKQAIASK 124 (415)
Q Consensus 97 ~~~~G~~~v~l~~~~~~~~~~~~l~~~~ 124 (415)
..+.|-.++.+....+.+++...+...+
T Consensus 88 ~a~~Ge~vlyfSlEes~~~i~~R~~s~g 115 (237)
T PRK05973 88 AMKSGRTGVFFTLEYTEQDVRDRLRALG 115 (237)
T ss_pred HHhcCCeEEEEEEeCCHHHHHHHHHHcC
Confidence 3345877888888888888888877664
No 388
>PRK08526 threonine dehydratase; Provisional
Probab=21.22 E-value=6.1e+02 Score=24.20 Aligned_cols=55 Identities=16% Similarity=0.106 Sum_probs=42.5
Q ss_pred EcCCchhHHHHHHHHHHhCCeEeecCCCCCHHHHHHHHHhcCceEEEEcccchHH
Q 014952 83 LLQNCPQFVFAFLGASYIGATSTTANPFYTPPEIAKQAIASKAKIIITQAVYNDK 137 (415)
Q Consensus 83 ~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~vl~~~~~~~~ 137 (415)
....+-......++|.++|..+..+-|...+......++..+++++++.....+.
T Consensus 73 ~aSaGNhg~avA~aa~~~Gi~~~IvmP~~~p~~k~~~~r~~GA~Vv~~g~~~~~a 127 (403)
T PRK08526 73 AASAGNHAQGVAISAKKFGIKAVIVMPEATPLLKVSGTKALGAEVILKGDNYDEA 127 (403)
T ss_pred EECccHHHHHHHHHHHHcCCCEEEEEcCCCCHHHHHHHHhCCCEEEEECCCHHHH
Confidence 3555556667778899999988888888777777788999999999998654443
No 389
>PRK14665 mnmA tRNA-specific 2-thiouridylase MnmA; Provisional
Probab=21.15 E-value=3.5e+02 Score=25.39 Aligned_cols=58 Identities=12% Similarity=-0.015 Sum_probs=41.9
Q ss_pred CCCCCEEEEEcCCchhHHHHHHHHHHhCCeEeecCCCC-----C---HHHHHHHHHhcCceEEEEc
Q 014952 74 VQKGDVIMLLLQNCPQFVFAFLGASYIGATSTTANPFY-----T---PPEIAKQAIASKAKIIITQ 131 (415)
Q Consensus 74 ~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~-----~---~~~~~~~l~~~~~~~vl~~ 131 (415)
++++++|++.++-+.|+.++.+-+.+.|.-++.+..+. + .+..+.+.+..+..+.+.+
T Consensus 2 ~~~~~kVlValSGGVDSsvaa~LL~~~G~~V~~v~~~~~~~~~~~~d~~~a~~va~~LgIp~~vvd 67 (360)
T PRK14665 2 MEKNKRVLLGMSGGTDSSVAAMLLLEAGYEVTGVTFRFYEFNGSTEYLEDARALAERLGIGHITYD 67 (360)
T ss_pred CCCCCEEEEEEcCCHHHHHHHHHHHHcCCeEEEEEEecCCCCCChHHHHHHHHHHHHhCCCEEEEe
Confidence 46788999999999999999999888887665543221 2 2234667777787776654
No 390
>PRK11070 ssDNA exonuclease RecJ; Provisional
Probab=21.05 E-value=8.7e+02 Score=24.56 Aligned_cols=98 Identities=13% Similarity=0.118 Sum_probs=59.2
Q ss_pred eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHH----HHHHHHHHhCC-eE-eecCC------CCCHHHHHHH
Q 014952 52 VYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFV----FAFLGASYIGA-TS-TTANP------FYTPPEIAKQ 119 (415)
Q Consensus 52 ~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~----~~~lA~~~~G~-~~-v~l~~------~~~~~~~~~~ 119 (415)
.....++.+.+++++..+.+ +.+|.|+.+-..|-+ +...++.++|+ .+ ..++. ..+.+.+..+
T Consensus 49 P~~l~~m~~a~~ri~~ai~~-----~e~I~I~gDyD~DGitstail~~~L~~~g~~~~~~~IP~R~~eGYGl~~~~i~~~ 123 (575)
T PRK11070 49 WQQLSGIEKAVELLYNALRE-----GTRIIVVGDFDADGATSTALSVLALRSLGCSNVDYLVPNRFEDGYGLSPEVVDQA 123 (575)
T ss_pred hHHhhCHHHHHHHHHHHHHC-----CCEEEEEEecCccHHHHHHHHHHHHHHcCCCceEEEeCCCCcCCCCCCHHHHHHH
Confidence 45567788888888777755 668999998765543 34556677887 23 22321 4555666665
Q ss_pred HHhcCceEEEEcccc---hHHHHhhhhhcCceEEEeCCCC
Q 014952 120 AIASKAKIIITQAVY---NDKVRDLSEHHGARIVTIDPPP 156 (415)
Q Consensus 120 l~~~~~~~vl~~~~~---~~~~~~~~~~~~~~~i~~~~~~ 156 (415)
.. .+++++|+-+-- .+.+. .....++.+|++|...
T Consensus 124 ~~-~~~~LiItvD~Gi~~~e~i~-~a~~~gidvIVtDHH~ 161 (575)
T PRK11070 124 HA-RGAQLIVTVDNGISSHAGVA-HAHALGIPVLVTDHHL 161 (575)
T ss_pred Hh-cCCCEEEEEcCCcCCHHHHH-HHHHCCCCEEEECCCC
Confidence 54 467777764322 22222 2334578888887643
No 391
>PF06564 YhjQ: YhjQ protein; InterPro: IPR017746 The YhjQ protein is encoded immediately upstream of bacterial cellulose synthase (bcs) genes in a broad range of bacteria, including both copies of the bcs locus in Klebsiella pneumoniae, and in several species is clearly part of the bcs operon. It is identified as a probable component of the bacterial cellulose metabolic process not only by gene location, but also by partial phylogenetic profiling, or Haft-Selengut algorithm [], based on a bacterial cellulose biosynthesis genome property profile. Cellulose plays an important role in biofilm formation and structural integrity in some bacteria. Mutants in yhjQ in Escherichia coli, show altered morphology an growth, but the function of YhjQ has not yet been determined.
Probab=21.03 E-value=4.3e+02 Score=23.19 Aligned_cols=83 Identities=11% Similarity=0.026 Sum_probs=57.8
Q ss_pred hHHHhhhccCCCCcEEEeCCC---CCeeeHHHHHHHHHHHHHHHHHcC-CCCCCEEEEEcCCchhHHHHHHHHHHhCCeE
Q 014952 29 TYCFENISQFADRPCIINGPT---GDVYTYADVELTSRKVAAGLSKLG-VQKGDVIMLLLQNCPQFVFAFLGASYIGATS 104 (415)
Q Consensus 29 ~~l~~~a~~~p~~~a~~~~~~---~~~~Ty~el~~~~~~~a~~L~~~g-~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~ 104 (415)
+-+...+.++++.+.+.=... .....+.++.+.-..+++.|.+.. ..+.+.|.+-+|....-+. .-++..+..+.
T Consensus 66 ~~W~~~~~~~~~g~~~LPfG~l~~~~~~~~~~l~~~~~~l~~~l~~l~~~~~~~~iliD~P~g~~~~~-~~al~~aD~vL 144 (243)
T PF06564_consen 66 ADWQQAAYRYSDGVDFLPFGQLTEAEREAFEQLAQDPQWLARALAALKALGPYDWILIDTPPGPSPYT-RQALAAADLVL 144 (243)
T ss_pred CCHHHHhhccCCCCEEEcCCCCCHHHHHHHHHhhcCHHHHHHHHHHHhccCCCCEEEEeCCCCCcHHH-HHHHHhCCeEE
Confidence 345666677788887774311 134566666777888889998877 6678899999998654443 44677778888
Q ss_pred eecCCCCC
Q 014952 105 TTANPFYT 112 (415)
Q Consensus 105 v~l~~~~~ 112 (415)
+.++|+-.
T Consensus 145 ~V~~~Da~ 152 (243)
T PF06564_consen 145 VVVNPDAA 152 (243)
T ss_pred EEeCCCHH
Confidence 88888643
No 392
>PRK08329 threonine synthase; Validated
Probab=20.94 E-value=5.4e+02 Score=23.92 Aligned_cols=87 Identities=9% Similarity=-0.021 Sum_probs=53.8
Q ss_pred CcEEEeCCCCCeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHHhCCeEeecCCCCCHHHHHHHH
Q 014952 41 RPCIINGPTGDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGATSTTANPFYTPPEIAKQA 120 (415)
Q Consensus 41 ~~a~~~~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l 120 (415)
++.+-++..+-+-||++-. +..+...+.+.|. +.|...+. +-.-.....++.++|..+..+-|...+......+
T Consensus 73 ~l~~K~E~~nPtGSfKdRg--a~~~i~~a~~~g~---~~vv~aSs-GN~g~alA~~aa~~G~~~~v~vp~~~~~~k~~~~ 146 (347)
T PRK08329 73 KVYFKLDYLQPTGSFKDRG--TYVTVAKLKEEGI---NEVVIDSS-GNAALSLALYSLSEGIKVHVFVSYNASKEKISLL 146 (347)
T ss_pred eEEEEeCCCCCCcCCHHHH--HHHHHHHHHHcCC---CEEEEECC-CcHHHHHHHHHHHcCCcEEEEECCCChHHHHHHH
Confidence 4555555445666777632 2233333445554 34554443 3334444556667888777777776777778889
Q ss_pred HhcCceEEEEccc
Q 014952 121 IASKAKIIITQAV 133 (415)
Q Consensus 121 ~~~~~~~vl~~~~ 133 (415)
+..++++++++.+
T Consensus 147 ~~~GA~v~~v~~~ 159 (347)
T PRK08329 147 SRLGAELHFVEGD 159 (347)
T ss_pred HHcCCEEEEECCC
Confidence 9999999999765
No 393
>KOG0633 consensus Histidinol phosphate aminotransferase [Amino acid transport and metabolism]
Probab=20.91 E-value=1.4e+02 Score=26.35 Aligned_cols=68 Identities=15% Similarity=0.028 Sum_probs=51.2
Q ss_pred HHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHHhCCeEeecCCCCC--HHHHHHHHHh-cCceEEEEccc
Q 014952 66 AAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGATSTTANPFYT--PPEIAKQAIA-SKAKIIITQAV 133 (415)
Q Consensus 66 a~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~--~~~~~~~l~~-~~~~~vl~~~~ 133 (415)
--.+.+.-+-||.-=.+.+|.+...++..-++.-++.+-+|++|+.+ .+.+..++.. +.++++|..+.
T Consensus 99 ID~iiR~~c~PGkeKIl~cPPtysMY~v~A~iNd~eVvkvpl~pdF~lnvdai~evl~~ds~iK~~F~tSP 169 (375)
T KOG0633|consen 99 IDLIIRCVCDPGKEKILDCPPTYSMYVVDAAINDAEVVKVPLNPDFSLNVDAIAEVLELDSKIKCIFLTSP 169 (375)
T ss_pred HHHHHhheecCCccceeecCCcceeEEEEeecCCceEEEecCCCCccccHHHHHHHHhccccceEEEEcCC
Confidence 34455555678866677888899999999999999999999998865 4566666654 57888886543
No 394
>KOG0330 consensus ATP-dependent RNA helicase [RNA processing and modification]
Probab=20.48 E-value=2.8e+02 Score=26.19 Aligned_cols=57 Identities=11% Similarity=0.151 Sum_probs=45.0
Q ss_pred CCCEEEEEcCCchhHHHHHHHHHHhCCeEeecCCCCCHHHHHHHHHhc---CceEEEEcc
Q 014952 76 KGDVIMLLLQNCPQFVFAFLGASYIGATSTTANPFYTPPEIAKQAIAS---KAKIIITQA 132 (415)
Q Consensus 76 ~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~---~~~~vl~~~ 132 (415)
.|..+.|++..+...-...+.+..+|..++|++.+++.+.....+++. ..++++|++
T Consensus 299 ~g~s~iVF~~t~~tt~~la~~L~~lg~~a~~LhGqmsq~~Rlg~l~~Fk~~~r~iLv~TD 358 (476)
T KOG0330|consen 299 AGNSVIVFCNTCNTTRFLALLLRNLGFQAIPLHGQMSQSKRLGALNKFKAGARSILVCTD 358 (476)
T ss_pred cCCcEEEEEeccchHHHHHHHHHhcCcceecccchhhHHHHHHHHHHHhccCCcEEEecc
Confidence 467789999888777778888899999999999999988777777654 445666644
No 395
>TIGR01203 HGPRTase hypoxanthine phosphoribosyltransferase. Sequence differences as small as a single residue can affect whether members of this family act on hypoxanthine and guanine or hypoxanthine only. The designation of this model as equivalog reflects hypoxanthine specificity and does not reflect whether or not guanine can replace hypoxanthine.
Probab=20.45 E-value=3.1e+02 Score=22.25 Aligned_cols=20 Identities=5% Similarity=0.062 Sum_probs=18.6
Q ss_pred eeHHHHHHHHHHHHHHHHHc
Q 014952 53 YTYADVELTSRKVAAGLSKL 72 (415)
Q Consensus 53 ~Ty~el~~~~~~~a~~L~~~ 72 (415)
+||.|+.+.+.++|..+.+.
T Consensus 3 is~~~i~~~i~~lA~~I~~~ 22 (166)
T TIGR01203 3 IPEEQIKARIAELAKQITED 22 (166)
T ss_pred cCHHHHHHHHHHHHHHHHHH
Confidence 79999999999999999875
No 396
>cd08230 glucose_DH Glucose dehydrogenase. Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai
Probab=20.43 E-value=5.7e+02 Score=23.54 Aligned_cols=57 Identities=16% Similarity=-0.028 Sum_probs=37.0
Q ss_pred cCCCCCCEEEEEcCCchhHHHHHHHHHHhCCeEeecCCCCCHHHHHHHHHhcCceEEE
Q 014952 72 LGVQKGDVIMLLLQNCPQFVFAFLGASYIGATSTTANPFYTPPEIAKQAIASKAKIII 129 (415)
Q Consensus 72 ~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~vl 129 (415)
.++++|++|+|..--.+-.+++++|- ..|+.++.++.....++...++.+.+++.+.
T Consensus 168 ~~~~~g~~vlI~G~G~vG~~a~q~ak-~~G~~vi~~~~~~~~~~~~~~~~~~Ga~~v~ 224 (355)
T cd08230 168 LPTWNPRRALVLGAGPIGLLAALLLR-LRGFEVYVLNRRDPPDPKADIVEELGATYVN 224 (355)
T ss_pred cccCCCCEEEEECCCHHHHHHHHHHH-HcCCeEEEEecCCCCHHHHHHHHHcCCEEec
Confidence 34678999999987666666666554 4687766666532233444566777877643
Done!