Query 014952
Match_columns 415
No_of_seqs 141 out of 1376
Neff 10.4
Searched_HMMs 29240
Date Mon Mar 25 04:03:50 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014952.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/014952hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ni2_A 4-coumarate:COA ligase; 100.0 1.7E-65 5.8E-70 503.8 41.2 402 9-411 6-407 (536)
2 2d1s_A Luciferase, luciferin 4 100.0 4E-61 1.4E-65 473.5 40.3 403 1-411 1-414 (548)
3 3tsy_A Fusion protein 4-coumar 100.0 2.6E-61 8.8E-66 505.1 39.0 405 7-411 43-454 (979)
4 3rix_A Luciferase, luciferin 4 100.0 8.6E-61 3E-65 471.8 39.1 397 7-411 3-412 (550)
5 3g7s_A Long-chain-fatty-acid-- 100.0 2.7E-60 9.3E-65 468.1 35.8 386 13-412 8-409 (549)
6 3etc_A AMP-binding protein; ad 100.0 2.9E-58 1E-62 455.3 39.0 383 18-412 48-450 (580)
7 4fuq_A Malonyl COA synthetase; 100.0 9.3E-59 3.2E-63 452.2 33.7 370 28-412 3-373 (503)
8 3o83_A Peptide arylation enzym 100.0 8E-59 2.7E-63 456.9 32.2 378 21-411 26-412 (544)
9 2v7b_A Benzoate-coenzyme A lig 100.0 1.3E-57 4.5E-62 447.3 39.2 379 19-412 17-404 (529)
10 1mdb_A 2,3-dihydroxybenzoate-A 100.0 9.6E-59 3.3E-63 455.9 29.0 372 24-412 24-404 (539)
11 3t5a_A Long-chain-fatty-acid-- 100.0 4.8E-59 1.6E-63 452.7 24.6 375 20-412 19-446 (480)
12 3e7w_A D-alanine--poly(phospho 100.0 4.2E-58 1.4E-62 448.8 30.8 366 25-412 1-370 (511)
13 3c5e_A Acyl-coenzyme A synthet 100.0 5.2E-57 1.8E-61 445.8 38.9 382 16-412 28-431 (570)
14 3fce_A D-alanine--poly(phospho 100.0 4.7E-58 1.6E-62 448.7 30.6 367 25-412 1-371 (512)
15 3r44_A Fatty acyl COA syntheta 100.0 3.4E-58 1.2E-62 449.7 29.2 374 21-411 12-387 (517)
16 3ivr_A Putative long-chain-fat 100.0 3E-57 1E-61 442.7 35.3 367 23-411 4-372 (509)
17 1v25_A Long-chain-fatty-acid-C 100.0 1.6E-57 5.5E-62 447.4 33.5 380 23-412 16-409 (541)
18 3rg2_A Enterobactin synthase c 100.0 9.7E-58 3.3E-62 455.6 31.2 395 1-412 3-408 (617)
19 4dg8_A PA1221; ANL superfamily 100.0 1.6E-57 5.5E-62 452.5 32.4 366 18-413 20-387 (620)
20 4gr5_A Non-ribosomal peptide s 100.0 2.4E-57 8.2E-62 448.9 32.0 362 22-412 72-435 (570)
21 1t5h_X 4-chlorobenzoyl COA lig 100.0 2.5E-56 8.5E-61 435.5 36.0 360 25-411 2-376 (504)
22 1pg4_A Acetyl-COA synthetase; 100.0 7.7E-57 2.6E-61 451.1 32.8 378 26-412 77-489 (652)
23 3l8c_A D-alanine--poly(phospho 100.0 7.4E-57 2.5E-61 441.3 31.3 367 24-412 3-374 (521)
24 1amu_A GRSA, gramicidin synthe 100.0 1.2E-56 4E-61 442.6 32.7 363 19-412 33-398 (563)
25 1ry2_A Acetyl-coenzyme A synth 100.0 4.9E-56 1.7E-60 445.4 33.7 381 26-412 83-498 (663)
26 3kxw_A Saframycin MX1 syntheta 100.0 1.5E-56 5.3E-61 445.9 25.2 377 22-413 8-426 (590)
27 3ipl_A 2-succinylbenzoate--COA 100.0 9.4E-55 3.2E-59 424.4 28.5 361 25-409 1-371 (501)
28 3gqw_A Fatty acid AMP ligase; 100.0 6.8E-54 2.3E-58 425.8 33.0 377 18-409 14-434 (576)
29 3ite_A SIDN siderophore synthe 100.0 5E-53 1.7E-57 417.8 31.6 370 22-411 17-399 (562)
30 2vsq_A Surfactin synthetase su 100.0 3.7E-53 1.3E-57 454.0 32.0 364 24-412 463-829 (1304)
31 3nyq_A Malonyl-COA ligase; A/B 100.0 2.3E-54 8E-59 421.2 20.1 352 24-412 21-379 (505)
32 3hgu_A EHPF; phenazine, antibi 100.0 3.1E-32 1.1E-36 254.9 15.3 219 178-410 87-340 (369)
33 3qov_A Phenylacetate-coenzyme 100.0 1.1E-30 3.9E-35 249.8 14.1 208 178-394 81-291 (436)
34 4gs5_A Acyl-COA synthetase (AM 100.0 3.4E-30 1.2E-34 239.3 11.6 197 180-402 35-231 (358)
35 2y27_A Phenylacetate-coenzyme 100.0 3.2E-29 1.1E-33 239.8 15.0 207 178-394 86-296 (437)
36 2y4o_A Phenylacetate-coenzyme 100.0 5.3E-29 1.8E-33 238.7 14.0 207 178-394 88-298 (443)
37 4eql_A 4-substituted benzoates 95.1 0.14 4.9E-06 49.4 11.0 31 179-209 90-121 (581)
38 2y27_A Phenylacetate-coenzyme 93.5 0.74 2.5E-05 43.0 12.2 103 38-141 88-199 (437)
39 2y4o_A Phenylacetate-coenzyme 92.5 1.2 4.2E-05 41.5 12.0 89 51-140 110-200 (443)
40 3qov_A Phenylacetate-coenzyme 92.4 1.1 3.9E-05 41.6 11.7 101 40-141 86-195 (436)
41 3ipl_A 2-succinylbenzoate--COA 85.9 8.4 0.00029 36.4 12.4 101 37-141 160-268 (501)
42 3hgu_A EHPF; phenazine, antibi 84.4 3.8 0.00013 37.0 8.8 87 51-139 109-220 (369)
43 3ni2_A 4-coumarate:COA ligase; 83.6 3.9 0.00014 39.1 8.9 99 179-287 34-133 (536)
44 3g7s_A Long-chain-fatty-acid-- 83.5 5.4 0.00018 38.3 9.9 106 180-289 32-138 (549)
45 3ivr_A Putative long-chain-fat 82.4 3.9 0.00013 38.8 8.3 97 180-288 19-116 (509)
46 2d1s_A Luciferase, luciferin 4 81.7 8.4 0.00029 37.0 10.5 99 40-140 192-299 (548)
47 1v25_A Long-chain-fatty-acid-C 81.6 6.5 0.00022 37.7 9.6 102 180-289 31-133 (541)
48 1mdb_A 2,3-dihydroxybenzoate-A 80.0 19 0.00065 34.3 12.3 100 38-141 180-289 (539)
49 3t5a_A Long-chain-fatty-acid-- 79.8 7.3 0.00025 36.5 9.2 108 179-290 36-147 (480)
50 1t5h_X 4-chlorobenzoyl COA lig 79.2 8.1 0.00028 36.6 9.3 99 180-288 15-116 (504)
51 3c5e_A Acyl-coenzyme A synthet 78.4 10 0.00035 36.6 9.8 104 180-289 56-160 (570)
52 3o83_A Peptide arylation enzym 78.3 21 0.00071 34.1 12.0 99 38-140 189-297 (544)
53 1ry2_A Acetyl-coenzyme A synth 78.3 8.1 0.00028 38.2 9.2 99 180-283 95-194 (663)
54 2v7b_A Benzoate-coenzyme A lig 77.9 5.9 0.0002 37.8 8.0 96 180-287 36-132 (529)
55 3r44_A Fatty acyl COA syntheta 77.8 7.9 0.00027 36.8 8.8 97 180-286 29-126 (517)
56 1amu_A GRSA, gramicidin synthe 76.4 9.2 0.00031 36.9 8.9 97 180-288 52-149 (563)
57 1pg4_A Acetyl-COA synthetase; 76.4 8.8 0.0003 37.8 8.9 98 180-283 89-187 (652)
58 3etc_A AMP-binding protein; ad 75.2 9.1 0.00031 37.1 8.5 98 179-283 68-166 (580)
59 3rix_A Luciferase, luciferin 4 74.9 14 0.00048 35.4 9.7 101 39-140 189-297 (550)
60 3fce_A D-alanine--poly(phospho 73.6 13 0.00044 35.2 9.0 99 38-139 142-250 (512)
61 4gr5_A Non-ribosomal peptide s 73.2 11 0.00038 36.3 8.6 95 179-285 87-182 (570)
62 3e7w_A D-alanine--poly(phospho 71.6 16 0.00055 34.5 9.2 100 38-140 141-250 (511)
63 3kxw_A Saframycin MX1 syntheta 71.5 15 0.00053 35.3 9.2 103 180-290 24-130 (590)
64 3rg2_A Enterobactin synthase c 71.2 38 0.0013 32.9 12.0 99 38-140 182-290 (617)
65 3tbh_A O-acetyl serine sulfhyd 69.9 22 0.00074 31.6 9.0 92 40-133 35-127 (334)
66 4gs5_A Acyl-COA synthetase (AM 69.8 21 0.00073 31.9 9.1 104 28-140 28-139 (358)
67 3tsy_A Fusion protein 4-coumar 68.7 15 0.00052 38.1 8.9 98 179-286 73-171 (979)
68 4fuq_A Malonyl COA synthetase; 68.0 11 0.00037 35.7 7.0 82 200-284 27-109 (503)
69 3l8c_A D-alanine--poly(phospho 65.2 15 0.00053 34.7 7.6 81 200-283 28-109 (521)
70 3vc3_A Beta-cyanoalnine syntha 60.9 35 0.0012 30.4 8.6 93 40-133 50-142 (344)
71 4eez_A Alcohol dehydrogenase 1 60.8 39 0.0013 29.9 9.0 78 52-132 136-216 (348)
72 3nyq_A Malonyl-COA ligase; A/B 58.1 53 0.0018 30.9 9.9 98 38-140 153-259 (505)
73 3ezx_A MMCP 1, monomethylamine 58.1 45 0.0015 27.4 8.2 78 238-321 105-195 (215)
74 3ite_A SIDN siderophore synthe 58.1 34 0.0012 32.7 8.6 100 179-283 32-134 (562)
75 3gqw_A Fatty acid AMP ligase; 54.8 25 0.00086 33.6 7.1 87 199-288 47-141 (576)
76 4dg8_A PA1221; ANL superfamily 54.7 35 0.0012 33.2 8.2 92 179-282 39-131 (620)
77 4b2g_A GH3-1 auxin conjugating 51.4 3.2 0.00011 40.3 0.0 31 179-209 96-127 (609)
78 3fpc_A NADP-dependent alcohol 50.5 66 0.0023 28.5 8.8 60 68-131 158-218 (352)
79 4b2g_A GH3-1 auxin conjugating 50.1 17 0.00058 35.3 4.8 85 300-394 301-406 (609)
80 1h2b_A Alcohol dehydrogenase; 49.4 97 0.0033 27.5 9.7 64 67-133 175-240 (359)
81 4aec_A Cysteine synthase, mito 48.6 82 0.0028 29.0 9.0 63 70-132 166-229 (430)
82 4epl_A Jasmonic acid-amido syn 48.0 30 0.001 33.4 6.1 31 179-209 95-126 (581)
83 2q3b_A Cysteine synthase A; py 46.4 1.1E+02 0.0037 26.6 9.3 90 41-133 32-122 (313)
84 3jv7_A ADH-A; dehydrogenase, n 45.5 1.1E+02 0.0038 26.9 9.4 78 53-133 143-225 (345)
85 4epl_A Jasmonic acid-amido syn 45.5 5.7 0.00019 38.3 0.8 86 300-395 301-402 (581)
86 2egu_A Cysteine synthase; O-ac 45.0 1.2E+02 0.004 26.3 9.3 91 40-133 29-120 (308)
87 2jtq_A Phage shock protein E; 44.1 49 0.0017 22.0 5.4 46 51-103 22-67 (85)
88 2pqm_A Cysteine synthase; OASS 43.8 1.1E+02 0.0037 27.1 9.0 90 41-133 43-133 (343)
89 3s2e_A Zinc-containing alcohol 40.2 73 0.0025 28.0 7.3 77 52-132 139-218 (340)
90 1kol_A Formaldehyde dehydrogen 40.1 1.3E+02 0.0043 27.2 9.0 55 69-127 178-233 (398)
91 2vsq_A Surfactin synthetase su 40.0 68 0.0023 34.5 8.1 94 179-284 476-570 (1304)
92 2v03_A Cysteine synthase B; py 39.9 1.6E+02 0.0055 25.3 9.3 89 41-132 26-115 (303)
93 3dzz_A Putative pyridoxal 5'-p 38.5 2.1E+02 0.007 25.2 10.4 54 74-130 106-166 (391)
94 3gi1_A LBP, laminin-binding pr 37.8 86 0.0029 27.0 7.1 93 57-153 158-258 (286)
95 1z7w_A Cysteine synthase; tran 37.6 1.6E+02 0.0056 25.6 9.1 92 40-133 30-122 (322)
96 3ijw_A Aminoglycoside N3-acety 37.0 25 0.00085 30.1 3.3 25 63-87 18-42 (268)
97 3l6b_A Serine racemase; pyrido 37.0 79 0.0027 28.1 6.9 59 76-135 75-133 (346)
98 3dwg_A Cysteine synthase B; su 36.8 1.6E+02 0.0054 25.8 8.8 90 41-133 38-128 (325)
99 1pl8_A Human sorbitol dehydrog 36.3 1.6E+02 0.0056 25.9 9.0 76 52-132 145-224 (356)
100 3tqh_A Quinone oxidoreductase; 35.3 1.1E+02 0.0039 26.4 7.7 75 52-131 125-203 (321)
101 3two_A Mannitol dehydrogenase; 34.8 73 0.0025 28.1 6.4 74 52-129 149-225 (348)
102 2nyg_A YOKD protein; PFAM02522 34.8 28 0.00096 29.9 3.3 24 64-87 17-40 (273)
103 3sma_A FRBF; N-acetyl transfer 34.7 28 0.00097 30.0 3.3 30 50-86 19-48 (286)
104 1vj0_A Alcohol dehydrogenase, 34.4 1.5E+02 0.0051 26.5 8.5 61 68-132 186-248 (380)
105 1zsy_A Mitochondrial 2-enoyl t 34.4 1.3E+02 0.0046 26.5 8.1 79 52-131 139-223 (357)
106 3ju7_A Putative PLP-dependent 34.3 1.2E+02 0.004 27.2 7.7 59 69-130 70-135 (377)
107 1pq4_A Periplasmic binding pro 34.1 67 0.0023 27.7 5.8 76 78-155 190-269 (291)
108 4ej6_A Putative zinc-binding d 34.0 1.1E+02 0.0037 27.4 7.4 59 68-130 174-233 (370)
109 2dph_A Formaldehyde dismutase; 33.5 1.9E+02 0.0065 26.0 9.1 55 68-126 177-232 (398)
110 3ip1_A Alcohol dehydrogenase, 33.5 1.6E+02 0.0055 26.6 8.6 55 73-131 210-265 (404)
111 2cf5_A Atccad5, CAD, cinnamyl 33.0 95 0.0033 27.5 6.9 63 67-132 170-233 (357)
112 1y7l_A O-acetylserine sulfhydr 32.3 2.5E+02 0.0084 24.3 10.0 91 40-133 26-117 (316)
113 3uog_A Alcohol dehydrogenase; 32.2 2.2E+02 0.0074 25.2 9.2 75 52-130 161-239 (363)
114 1uuf_A YAHK, zinc-type alcohol 31.9 93 0.0032 27.8 6.6 61 67-131 185-245 (369)
115 1y80_A Predicted cobalamin bin 31.7 1.9E+02 0.0066 23.2 8.0 83 51-133 55-148 (210)
116 2o1e_A YCDH; alpha-beta protei 30.6 98 0.0033 27.0 6.3 75 79-153 191-269 (312)
117 4h27_A L-serine dehydratase/L- 29.4 1.1E+02 0.0039 27.3 6.7 58 78-136 94-151 (364)
118 2prs_A High-affinity zinc upta 29.1 1.2E+02 0.0041 25.9 6.6 73 79-153 175-253 (284)
119 4a2c_A Galactitol-1-phosphate 29.1 1.8E+02 0.0062 25.3 8.1 63 67-133 151-214 (346)
120 1p0f_A NADP-dependent alcohol 29.1 2.5E+02 0.0086 24.8 9.1 58 71-132 186-244 (373)
121 3hh8_A Metal ABC transporter s 28.9 93 0.0032 26.9 5.8 93 56-150 159-259 (294)
122 1ofu_X SULA, hypothetical prot 28.6 1.7E+02 0.0058 21.3 7.5 53 66-118 47-101 (119)
123 1o58_A O-acetylserine sulfhydr 28.2 2.8E+02 0.0097 23.7 9.7 88 41-133 32-120 (303)
124 1e3j_A NADP(H)-dependent ketos 28.1 3E+02 0.01 24.0 9.4 60 68-131 160-219 (352)
125 3sr3_A Microcin immunity prote 28.0 2E+02 0.0067 25.4 7.9 61 73-133 9-88 (336)
126 3r7f_A Aspartate carbamoyltran 27.9 3E+02 0.01 23.9 9.2 100 52-152 9-120 (304)
127 3gaz_A Alcohol dehydrogenase s 27.8 2.5E+02 0.0084 24.6 8.6 71 52-127 122-197 (343)
128 4h1h_A LMO1638 protein; MCCF-l 27.5 2E+02 0.007 25.1 7.9 61 73-133 8-87 (327)
129 1gu7_A Enoyl-[acyl-carrier-pro 27.2 3.2E+02 0.011 24.0 9.8 80 52-132 138-224 (364)
130 3b8x_A WBDK, pyridoxamine 5-ph 27.2 3.2E+02 0.011 24.0 11.0 54 73-130 76-134 (390)
131 2jgn_A DBX, DDX3, ATP-dependen 27.1 1.8E+02 0.0063 22.7 7.0 70 61-132 32-104 (185)
132 2fsx_A RV0390, COG0607: rhodan 26.8 76 0.0026 23.9 4.4 47 63-109 66-113 (148)
133 1oft_A SULA, hypothetical prot 26.5 2.1E+02 0.0072 22.1 6.7 36 67-102 90-125 (161)
134 2rkb_A Serine dehydratase-like 26.5 1.5E+02 0.0052 25.7 6.9 58 77-135 54-111 (318)
135 3krt_A Crotonyl COA reductase; 26.2 3.7E+02 0.012 24.6 9.8 56 72-131 224-280 (456)
136 3isl_A Purine catabolism prote 26.1 3.3E+02 0.011 24.1 9.5 15 198-212 206-220 (416)
137 1yqd_A Sinapyl alcohol dehydro 26.1 1.9E+02 0.0065 25.6 7.6 63 67-132 177-240 (366)
138 2h6e_A ADH-4, D-arabinose 1-de 26.1 1.7E+02 0.0058 25.6 7.3 54 73-130 168-222 (344)
139 3nnk_A Ureidoglycine-glyoxylat 25.9 2.8E+02 0.0097 24.5 8.9 38 94-131 81-118 (411)
140 4dvj_A Putative zinc-dependent 25.4 3E+02 0.01 24.2 8.8 79 52-133 138-226 (363)
141 1piw_A Hypothetical zinc-type 25.3 1.3E+02 0.0046 26.5 6.4 62 67-132 170-231 (360)
142 4b7c_A Probable oxidoreductase 25.0 2.1E+02 0.0073 24.8 7.7 59 70-131 143-202 (336)
143 3goh_A Alcohol dehydrogenase, 24.9 1E+02 0.0035 26.6 5.5 73 52-129 115-190 (315)
144 3tla_A MCCF; serine protease, 24.8 2.2E+02 0.0077 25.5 7.6 62 72-133 38-118 (371)
145 1jvb_A NAD(H)-dependent alcoho 24.8 2.3E+02 0.0079 24.8 7.9 61 67-130 161-222 (347)
146 1rjw_A ADH-HT, alcohol dehydro 24.6 2E+02 0.007 25.0 7.5 60 67-130 155-214 (339)
147 1eg5_A Aminotransferase; PLP-d 24.5 2.8E+02 0.0097 24.1 8.6 55 75-130 87-145 (384)
148 3hvy_A Cystathionine beta-lyas 24.5 3.9E+02 0.013 24.3 9.5 59 74-132 113-184 (427)
149 1e3i_A Alcohol dehydrogenase, 24.3 3.3E+02 0.011 24.0 9.0 77 52-132 167-248 (376)
150 1urh_A 3-mercaptopyruvate sulf 24.3 1.1E+02 0.0039 25.8 5.6 41 63-103 72-113 (280)
151 1p5j_A L-serine dehydratase; l 24.2 1.7E+02 0.0058 26.2 6.8 58 77-135 93-150 (372)
152 3ujp_A Mn transporter subunit; 24.2 1.8E+02 0.0062 25.3 6.8 92 56-149 166-265 (307)
153 3uko_A Alcohol dehydrogenase c 24.2 2.2E+02 0.0075 25.3 7.7 77 52-132 165-246 (378)
154 3aey_A Threonine synthase; PLP 24.1 1.7E+02 0.0057 25.9 6.8 90 40-135 45-135 (351)
155 1uar_A Rhodanese; sulfurtransf 24.1 1.1E+02 0.0037 26.1 5.3 41 63-103 219-260 (285)
156 3ri6_A O-acetylhomoserine sulf 24.0 3.2E+02 0.011 24.9 8.8 71 81-152 100-173 (430)
157 1f8f_A Benzyl alcohol dehydrog 23.6 3.8E+02 0.013 23.6 9.7 59 70-132 184-243 (371)
158 1e0c_A Rhodanese, sulfurtransf 23.5 1.2E+02 0.0041 25.5 5.5 41 63-103 67-108 (271)
159 1ve1_A O-acetylserine sulfhydr 23.4 3.5E+02 0.012 23.1 10.0 64 69-133 51-117 (304)
160 3nvb_A Uncharacterized protein 23.4 4.1E+02 0.014 23.9 9.3 93 56-152 255-356 (387)
161 2fzw_A Alcohol dehydrogenase c 23.1 3.6E+02 0.012 23.8 8.9 77 52-132 162-243 (373)
162 3i16_A Aluminum resistance pro 23.0 2.4E+02 0.0081 25.8 7.7 59 74-132 112-184 (427)
163 1e0c_A Rhodanese, sulfurtransf 22.5 1.3E+02 0.0044 25.3 5.5 40 64-103 210-249 (271)
164 2wlr_A Putative thiosulfate su 22.5 1.4E+02 0.0049 27.2 6.2 57 52-108 171-235 (423)
165 2jhf_A Alcohol dehydrogenase E 22.4 3.7E+02 0.013 23.7 8.8 77 52-132 163-244 (374)
166 1cdo_A Alcohol dehydrogenase; 22.1 4E+02 0.014 23.5 9.0 77 52-132 164-245 (374)
167 3hbm_A UDP-sugar hydrolase; PS 22.0 91 0.0031 26.7 4.4 82 61-156 20-103 (282)
168 2d1f_A Threonine synthase; ami 21.9 2.1E+02 0.007 25.4 6.9 89 41-135 54-143 (360)
169 4d9i_A Diaminopropionate ammon 21.7 4.4E+02 0.015 23.6 9.8 60 76-136 110-170 (398)
170 2ayi_A Aminopeptidase T; metal 21.6 1.8E+02 0.0062 26.5 6.4 51 58-108 4-58 (408)
171 4e5s_A MCCFLIKE protein (BA_56 21.6 2.8E+02 0.0097 24.3 7.6 61 73-133 8-87 (331)
172 1xvl_A Mn transporter, MNTC pr 21.4 1.6E+02 0.0055 25.7 5.9 72 77-150 203-280 (321)
173 3d1p_A Putative thiosulfate su 21.2 1.4E+02 0.0049 21.9 5.0 52 52-103 62-117 (139)
174 2zsj_A Threonine synthase; PLP 20.9 1.8E+02 0.0061 25.7 6.3 88 42-135 49-137 (352)
175 3m6i_A L-arabinitol 4-dehydrog 20.9 3.1E+02 0.01 24.1 7.9 54 53-108 154-211 (363)
176 3hzu_A Thiosulfate sulfurtrans 20.7 1.8E+02 0.0061 25.3 6.1 41 63-103 97-138 (318)
177 1y81_A Conserved hypothetical 20.7 2.4E+02 0.0082 20.9 6.1 92 25-126 27-118 (138)
178 2d8a_A PH0655, probable L-thre 20.6 3.9E+02 0.013 23.3 8.5 59 68-131 160-219 (348)
179 3ss7_X D-serine dehydratase; t 20.5 4.9E+02 0.017 23.8 9.8 59 80-138 162-220 (442)
180 1mdo_A ARNB aminotransferase; 20.4 2.6E+02 0.009 24.5 7.5 56 72-131 74-134 (393)
181 3utn_X Thiosulfate sulfurtrans 20.3 1.9E+02 0.0066 25.4 6.2 44 62-105 98-142 (327)
182 3mfq_A TROA, high-affinity zin 20.1 1.4E+02 0.0047 25.6 5.1 80 56-137 139-225 (282)
183 3frk_A QDTB; aminotransferase, 20.0 2.8E+02 0.0096 24.2 7.5 58 69-130 68-130 (373)
No 1
>3ni2_A 4-coumarate:COA ligase; 4CL, phenylpropanoid biosynthesis; HET: AYL EPE; 1.90A {Populus tomentosa} PDB: 3a9v_A* 3a9u_A*
Probab=100.00 E-value=1.7e-65 Score=503.78 Aligned_cols=402 Identities=70% Similarity=1.157 Sum_probs=361.0
Q ss_pred cceeecCCCCCCCCCCCCHHhHHHhhhccCCCCcEEEeCCCCCeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCch
Q 014952 9 EFIFRSKLPDIYIPNHLPLHTYCFENISQFADRPCIINGPTGDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCP 88 (415)
Q Consensus 9 ~~~~~~~~~~~~~~~~~tl~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~ 88 (415)
..+|++.+|+...|.++|+.+.|.++++++|+++|+++...++++||+||.++++++|+.|+++|+++||+|+++++|+.
T Consensus 6 ~~i~~~~~~~~~~p~~~~l~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~lA~~L~~~Gv~~gd~V~i~~~~~~ 85 (536)
T 3ni2_A 6 EFIFRSKLPDIYIPKNLPLHSYVLENLSNHSSKPCLINGANGDVYTYADVELTARRVASGLNKIGIQQGDVIMLFLPSSP 85 (536)
T ss_dssp CCCBCCSSCCCCCCSSCCHHHHHTTTGGGSTTSEEEEETTTCCEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECCSSH
T ss_pred ceEEecCCCCCCCCCCCcHHHHHHHHhhcCCCceEEEECCCCCEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcH
Confidence 46888999999999899999999999999999999999766789999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHhCCeEeecCCCCCHHHHHHHHHhcCceEEEEcccchHHHHhhhhhcCceEEEeCCCCCCccchhhhhhh
Q 014952 89 QFVFAFLGASYIGATSTTANPFYTPPEIAKQAIASKAKIIITQAVYNDKVRDLSEHHGARIVTIDPPPENCLHFSELITQ 168 (415)
Q Consensus 89 ~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~~ 168 (415)
++++++|||+++|++++|++|.++.+++.+++++++++++|++....+.+.........+++.++........++++ ..
T Consensus 86 ~~~~~~la~~~~Gav~vpl~~~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 164 (536)
T 3ni2_A 86 EFVLAFLGASHRGAIITAANPFSTPAELAKHAKASRAKLLITQACYYEKVKDFARESDVKVMCVDSAPDGCLHFSEL-TQ 164 (536)
T ss_dssp HHHHHHHHHHHHTCEEEECCTTCCHHHHHHHHHHHTEEEEEECGGGTHHHHHHHHHHTCEEEESSCCCTTCEETHHH-HT
T ss_pred HHHHHHHHHHHhCCEEeccCCCCCHHHHHHHHHhcCCEEEEEChHHHHHHHHHHhhcCceEEEecCCCCCccCHHHH-hh
Confidence 99999999999999999999999999999999999999999999988888777666677888887766666677776 33
Q ss_pred cccCCCCcccCCCCCeEEEecCCCCCCCCceeeechHHHHHHHhhhhcCCCCCccCCCCcEEEEccchHHHHhhHHHHHH
Q 014952 169 ADENEIPAVKINPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLC 248 (415)
Q Consensus 169 ~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~l~ 248 (415)
......+.....++++++|+|||||||.||+|+++|+++.+............+.+.+++++++.+|++|.+++...++.
T Consensus 165 ~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgv~~th~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~h~~~~~~~~~~ 244 (536)
T 3ni2_A 165 ADENEAPQVDISPDDVVALPYSSGTTGLPKGVMLTHKGLITSVAQQVDGDNPNLYFHSEDVILCVLPMFHIYALNSIMLC 244 (536)
T ss_dssp SCGGGCCCCCCCTTSEEECCEECTTSSSCEEEEEEHHHHHHHHHHHHCSSSCSSCCCTTCCEEECSCTTSHHHHHHTHHH
T ss_pred ccccccccCCCCccCEEEEEcCCCccccchHHHhhHHHHHHHHHHHHhhccccccCCCCCEEEEecChHHHHHHHHHHHH
Confidence 33333444566789999999999999999999999999998887766544435568899999999999999999767889
Q ss_pred HHHcCcEEEEcCCCCHHHHHHHHHhcCceeeecchHHHHHHHcCCCCCCCCcccceeeeecCCCCCHHHHHHHHhhCCCC
Q 014952 249 ALRVGAAILIMQKFDIVKLMELVQKYKVTVAPFVPPIVLAVAKSGDVDKYDMSSIRTVMSGAAPMGKELEDAVRAKLPHA 328 (415)
Q Consensus 249 ~l~~G~~~v~~~~~~~~~~~~~l~~~~~t~l~~~p~~l~~l~~~~~~~~~~l~~lr~v~~gG~~l~~~~~~~~~~~~~~~ 328 (415)
++..|+++++.+.+++..+++.++++++|++.++|+++..+++.......++++||.+++||+++++++.+++++.||++
T Consensus 245 ~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~i~~gGe~l~~~~~~~~~~~~~~~ 324 (536)
T 3ni2_A 245 GLRVGAPILIMPKFEIGSLLGLIEKYKVSIAPVVPPVMMSIAKSPDLDKHDLSSLRMIKSGGAPLGKELEDTVRAKFPQA 324 (536)
T ss_dssp HHHHTCCEEECSSCCHHHHHHHHHHHTCCEEEECHHHHHHHHTCSCGGGSCCTTCCEEEEESSCCCHHHHHHHHHHCTTS
T ss_pred HHhcCCEEEEcCCCCHHHHHHHHHHhCCeEEEccHHHHHHHHhCcccccCCCccceEEEECCCCCCHHHHHHHHHHCCCC
Confidence 99999999999999999999999999999999999999999998877778899999999999999999999999999999
Q ss_pred ccccccccccCCccccccccccCCccccCCCcccccccCCeEEEEeCCCCCCCCCCCceeEEEecCccccccccCCccee
Q 014952 329 KLGQGYGMTEAGPVLSMCLAFAKEPFEIKSGACGTVVRNAEMKIVDPDTGISLPRNQAGEICIRGAQIMKGTYHIYAPFL 408 (415)
Q Consensus 329 ~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~G~p~~~~~v~i~d~~~~~~~~~g~~Gel~v~~~~~~~gY~~~~~~~~ 408 (415)
++++.||+||++++++.+............+++|+|+++++++|+|++++++++.|+.|||+|+||+++.|||++|+.+.
T Consensus 325 ~l~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~GEl~v~g~~v~~GY~~~p~~t~ 404 (536)
T 3ni2_A 325 RLGQGYGMTEAGPVLAMCLAFAKEPFDIKPGACGTVVRNAEMKIVDPETGASLPRNQPGEICIRGDQIMKGYLNDPEATS 404 (536)
T ss_dssp EEEEEEECGGGSSEEEECGGGSSSCCCCCTTCCCEECSSCEEEEECTTTCCBCCTTCCEEEEEESTTSCSEETTCHHHHH
T ss_pred CccccccccccchhhhcccccCCccccCCCCCeeEeCCCcEEEEEeCCCCcCCCCCCccEEEEeCcccchhhcCChhHHH
Confidence 99999999999987766644444445567789999999999999999889999999999999999999999999999988
Q ss_pred eee
Q 014952 409 LSI 411 (415)
Q Consensus 409 ~~~ 411 (415)
.+|
T Consensus 405 ~~~ 407 (536)
T 3ni2_A 405 RTI 407 (536)
T ss_dssp HHB
T ss_pred hhc
Confidence 776
No 2
>2d1s_A Luciferase, luciferin 4-monooxygenase; alpha/beta, beta barrel, alpha+beta, riken structural genomics/proteomics initiative, RSGI; HET: SLU; 1.30A {Luciola cruciata} PDB: 2d1q_A* 2d1r_A* 2d1t_A*
Probab=100.00 E-value=4e-61 Score=473.50 Aligned_cols=403 Identities=27% Similarity=0.389 Sum_probs=336.9
Q ss_pred CccccccccceeecCCCCCCCCCCCCHHh-HHHhhhccCCCCcEEEeCCCCCeeeHHHHHHHHHHHHHHHHHcCCCCCCE
Q 014952 1 MEAKQDHQEFIFRSKLPDIYIPNHLPLHT-YCFENISQFADRPCIINGPTGDVYTYADVELTSRKVAAGLSKLGVQKGDV 79 (415)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~tl~~-~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~ 79 (415)
|+.+.+...-+|.+..|+...|...|+.+ .+.++++++ +++|+++...++++||+||.++++++|+.|+++|+++||+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~l~~~~~~~-~~~A~~~~~~~~~~Ty~el~~~~~~lA~~L~~~Gv~~gd~ 79 (548)
T 2d1s_A 1 MENMENDENIVVGPKPFYPIEEGSAGTQLRKYMERYAKL-GAIAFTNAVTGVDYSYAEYLEKSCCLGKALQNYGLVVDGR 79 (548)
T ss_dssp ------CTTSEECCCCSSCCCSSCHHHHHHHHHHHHHHH-TCEEEEETTTCCEEEHHHHHHHHHHHHHHHHHHTCCTTCE
T ss_pred CCCCCCCcceEecCCCCCCCCCCcCcHHHHHHHhhhccc-CCceEEEcCCCCEeeHHHHHHHHHHHHHHHHHcCCCCCCE
Confidence 55555566678888888888888889999 999999999 9999998544789999999999999999999999999999
Q ss_pred EEEEcCCchhHHHHHHHHHHhCCeEeecCCCCCHHHHHHHHHhcCceEEEEcccchHHHHhhhhhcC--ceEEEeCCCC-
Q 014952 80 IMLLLQNCPQFVFAFLGASYIGATSTTANPFYTPPEIAKQAIASKAKIIITQAVYNDKVRDLSEHHG--ARIVTIDPPP- 156 (415)
Q Consensus 80 V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~--~~~i~~~~~~- 156 (415)
|+++++|++++++++|||+++|++++|+++.++.+++.+++++++++++|++.+..+.+.......+ .+++.++...
T Consensus 80 V~i~~~n~~e~~~~~la~~~~Gav~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (548)
T 2d1s_A 80 IALCSENCEEFFIPVIAGLFIGVGVAPTNEIYTLRELVHSLGISKPTIVFSSKKGLDKVITVQKTVTTIKTIVILDSKVD 159 (548)
T ss_dssp EEEECSSCTTTHHHHHHHHHHTCEEEEECTTSCHHHHHHHHHHHCCSEEEECTTTHHHHHHHHHHSTTCCEEEETTCSSC
T ss_pred EEEEeCCchhHHHHHHHHHhhCCEEeccCCCCCHHHHHHHHHhcCCeEEEEcHHHHHHHHHHhcCCCCCCEEEEeCCccc
Confidence 9999999999999999999999999999999999999999999999999999988776665443322 4555555321
Q ss_pred -CCccchhhhhhhcccCCCCcccCC-----C-CCeEEEecCCCCCCCCceeeechHHHHHHHhhhhcCCCCCccCCCCcE
Q 014952 157 -ENCLHFSELITQADENEIPAVKIN-----P-DDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDV 229 (415)
Q Consensus 157 -~~~~~~~~l~~~~~~~~~~~~~~~-----~-~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~ 229 (415)
.....++++.........+..... + +++++|+|||||||.||+|+++|+++............ .+.+.++++
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~~-~~~~~~~d~ 238 (548)
T 2d1s_A 160 YRGYQCLDTFIKRNTPPGFQASSFKTVEVDRKEQVALIMNSSGSTGLPKGVQLTHENIVTRFSHARDPIY-GNQVSPGTA 238 (548)
T ss_dssp BTTBCBHHHHHHHTSCTTCCGGGCCCCCCCTTTCEEEEECCSSCSSSCCCEEEEHHHHHHHHHHHTCTTT-SCCCCTTCE
T ss_pred ccccccHHHHHhcCccccCCcccccccccCCCCCEEEEEeCCCCCCCCCEEEecHHHHHHHHHHhhchhh-ccCCCccce
Confidence 112345665332211112222222 4 89999999999999999999999999988877665321 246788999
Q ss_pred EEEccchHHHHhhHHHHHHHHHcCcEEEEcCCCCHHHHHHHHHhcCceeeecchHHHHHHHcCCCCCCCCcccceeeeec
Q 014952 230 ILCVLPLFHIYSLNSVLLCALRVGAAILIMQKFDIVKLMELVQKYKVTVAPFVPPIVLAVAKSGDVDKYDMSSIRTVMSG 309 (415)
Q Consensus 230 ~~~~~pl~~~~g~~~~~l~~l~~G~~~v~~~~~~~~~~~~~l~~~~~t~l~~~p~~l~~l~~~~~~~~~~l~~lr~v~~g 309 (415)
+++.+|++|.+++...++.++ .|+++++.+.+++..+++.++++++|+++++|+++..|.+.......++++||.+++|
T Consensus 239 ~l~~~p~~h~~g~~~~~~~~l-~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~i~~g 317 (548)
T 2d1s_A 239 VLTVVPFHHGFGMFTTLGYLI-CGFRVVMLTKFDEETFLKTLQDYKCTSVILVPTLFAILNKSELLNKYDLSNLVEIASG 317 (548)
T ss_dssp EEECSCTTSHHHHHHHHHHHH-TTCEEEECCCCCHHHHHHHHHHTTEEEEEECHHHHHHHHHCSCGGGSCCTTCCEEEEC
T ss_pred EEEeccHHHHHHHHHHHHHHh-cCcEEEEcCCCCHHHHHHHHHHcCCcEEEecHHHHHHHHhCcccccccccceeEEEEc
Confidence 999999999999876566777 9999999999999999999999999999999999999998776666778999999999
Q ss_pred CCCCCHHHHHHHHhhCCCCccccccccccCCccccccccccCCccccCCCcccccccCCeEEEEeCCCCCCCCCCCceeE
Q 014952 310 AAPMGKELEDAVRAKLPHAKLGQGYGMTEAGPVLSMCLAFAKEPFEIKSGACGTVVRNAEMKIVDPDTGISLPRNQAGEI 389 (415)
Q Consensus 310 G~~l~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~G~p~~~~~v~i~d~~~~~~~~~g~~Gel 389 (415)
|+++++++.+++.+.|++.++++.||+||++++++.+ .......+++|+|+|+++++|+|++++++++.|+.|||
T Consensus 318 G~~l~~~~~~~~~~~~~~~~i~~~YG~TE~~~~~~~~-----~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~GEl 392 (548)
T 2d1s_A 318 GAPLSKEVGEAVARRFNLPGVRQGYGLTETTSAIIIT-----PEGDDKPGASGKVVPLFKAKVIDLDTKKSLGPNRRGEV 392 (548)
T ss_dssp SSCCCHHHHHHHHHHTTCSCCEEEEECGGGSSEEEEC-----CTTCCCTTCCBEECTTCEEEEECTTTCCBCCTTCCEEE
T ss_pred CccCCHHHHHHHHHHcCCCceeeccccccccceeeec-----CcccCCCCCCCccCCCceEEEEeCCcCccCCCCCCeEE
Confidence 9999999999999999888999999999999765543 22235678999999999999999888999999999999
Q ss_pred EEecCccccccccCCcceeeee
Q 014952 390 CIRGAQIMKGTYHIYAPFLLSI 411 (415)
Q Consensus 390 ~v~~~~~~~gY~~~~~~~~~~~ 411 (415)
+|+||+++.|||++|+.+...|
T Consensus 393 ~v~g~~v~~GY~~~~~~t~~~f 414 (548)
T 2d1s_A 393 CVKGPMLMKGYVNNPEATKELI 414 (548)
T ss_dssp EEESTTSCSEETTCHHHHHHHB
T ss_pred EECCHHHhhhhcCChHHhhhcc
Confidence 9999999999999999887766
No 3
>3tsy_A Fusion protein 4-coumarate--COA ligase 1, resvera synthase; transferase; 3.10A {Arabidospis thaliana}
Probab=100.00 E-value=2.6e-61 Score=505.07 Aligned_cols=405 Identities=71% Similarity=1.130 Sum_probs=354.4
Q ss_pred cccceeecCCCCCCCCCCCCHHhHHHhhhccCCCCcEEEeCCCCCeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCC
Q 014952 7 HQEFIFRSKLPDIYIPNHLPLHTYCFENISQFADRPCIINGPTGDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQN 86 (415)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~tl~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~ 86 (415)
....+|++.+|+...|+.+|++++|.++++++|+++|+++...++++||+||.++++++|+.|+++|+++||+|+++++|
T Consensus 43 ~~~~~~~~~~~~~~~p~~~tl~~~l~~~a~~~pd~~Al~~~~~~~~~TY~eL~~~~~~lA~~L~~~Gv~~gd~V~i~~~n 122 (979)
T 3tsy_A 43 NSDVIFRSKLPDIYIPNHLSLHDYIFQNISEFATKPCLINGPTGHVYTYSDVHVISRQIAANFHKLGVNQNDVVMLLLPN 122 (979)
T ss_dssp --CCCBCCSSCCCCCCTTSCHHHHHTTTGGGTTTSEEEEETTTCCEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECSS
T ss_pred CCCceeecCCCCCCCCCCCCHHHHHHHHHHhCCCCeEEEECCCCcEEEHHHHHHHHHHHHHHHHHcCCCCcCEEEEEeCC
Confidence 44668899999999999999999999999999999999998667899999999999999999999999999999999999
Q ss_pred chhHHHHHHHHHHhCCeEeecCCCCCHHHHHHHHHhcCceEEEEcccchHHHHhhhhhcCceEEEeCCC-----CCCccc
Q 014952 87 CPQFVFAFLGASYIGATSTTANPFYTPPEIAKQAIASKAKIIITQAVYNDKVRDLSEHHGARIVTIDPP-----PENCLH 161 (415)
Q Consensus 87 ~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~i~~~~~-----~~~~~~ 161 (415)
++++++++|||+++|++++|++|.++.+++.+++++++++++|++.+..+.+..........++.++.. ......
T Consensus 123 s~e~~v~~lA~~~~Ga~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (979)
T 3tsy_A 123 CPEFVLSFLAASFRGATATAANPFFTPAEIAKQAKASNTKLIITEARYVDKIKPLQNDDGVVIVCIDDNESVPIPEGCLR 202 (979)
T ss_dssp CHHHHHHHHHHHHHTCEEEEECTTSCHHHHHHHHHHHTEEEEEECSTTTTTSHHHHHTSCCEEEECCCCTTSCCCTTEEE
T ss_pred CHHHHHHHHHHHHcCCEEEeeCCCCCHHHHHHHHHHcCCeEEEEChHHHHHHHHHhhcCCceEEEeCCcccccCCccccc
Confidence 999999999999999999999999999999999999999999999887776666555556667777643 223344
Q ss_pred hhhhhhhccc--CCCCcccCCCCCeEEEecCCCCCCCCceeeechHHHHHHHhhhhcCCCCCccCCCCcEEEEccchHHH
Q 014952 162 FSELITQADE--NEIPAVKINPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHI 239 (415)
Q Consensus 162 ~~~l~~~~~~--~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~ 239 (415)
++++...... ...+.....++++++|+|||||||.||+|+++|+++.+.+..........+.+.+++++++.+|++|.
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~h~ 282 (979)
T 3tsy_A 203 FTELTQSTTEASEVIDSVEISPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYFHSDDVILCVLPMFHI 282 (979)
T ss_dssp GGGTSSCCSGGGGGSCCSCCCTTSEEECCBCCCSSSSCCBEEEEHHHHHHHHHHHHCSSSCSSCCCSSCEEEECSCSSSH
T ss_pred HHHHhhccccccccCCcCCCCccceEEEEeCCCCCCCCeEEEechHHHHHHHHHHHHhhcccccCCCCCEEEEECchHHH
Confidence 5555222111 12233456789999999999999999999999999999887766544445678899999999999999
Q ss_pred HhhHHHHHHHHHcCcEEEEcCCCCHHHHHHHHHhcCceeeecchHHHHHHHcCCCCCCCCcccceeeeecCCCCCHHHHH
Q 014952 240 YSLNSVLLCALRVGAAILIMQKFDIVKLMELVQKYKVTVAPFVPPIVLAVAKSGDVDKYDMSSIRTVMSGAAPMGKELED 319 (415)
Q Consensus 240 ~g~~~~~l~~l~~G~~~v~~~~~~~~~~~~~l~~~~~t~l~~~p~~l~~l~~~~~~~~~~l~~lr~v~~gG~~l~~~~~~ 319 (415)
+++...++.++..|+++++.+++++..+++.++++++|++.++|+++..|.+.......++++||.+++||+++++++.+
T Consensus 283 ~~~~~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~~~~gg~~l~~~~~~ 362 (979)
T 3tsy_A 283 YALNSIMLCGLRVGAAILIMPKFEINLLLELIQRCKVTVAPMVPPIVLAIAKSSETEKYDLSSIRVVKSGAAPLGKELED 362 (979)
T ss_dssp HHHHHTHHHHHHHTCEEEECSSCCHHHHHHHHHHHTCCEEEECHHHHHHHHHCGGGGTSCCTTCCEEEESSCCCCSSHHH
T ss_pred HHHHHHHHHHHhcCcEEEEeCCCCHHHHHHHHHHhCCeEEEcHHHHHHHHHhCccccCCCccceEEEEEcCCCCCHHHHH
Confidence 99976788999999999999999999999999999999999999999999988777777899999999999999999999
Q ss_pred HHHhhCCCCccccccccccCCccccccccccCCccccCCCcccccccCCeEEEEeCCCCCCCCCCCceeEEEecCccccc
Q 014952 320 AVRAKLPHAKLGQGYGMTEAGPVLSMCLAFAKEPFEIKSGACGTVVRNAEMKIVDPDTGISLPRNQAGEICIRGAQIMKG 399 (415)
Q Consensus 320 ~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~G~p~~~~~v~i~d~~~~~~~~~g~~Gel~v~~~~~~~g 399 (415)
++.+.||++++++.||+||++.+++.+......+.....+++|+|+++++++|+|++++++++.|+.|||+|+||.+++|
T Consensus 363 ~~~~~~~~~~l~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d~~~~~~~~~g~~GEl~i~g~~v~~G 442 (979)
T 3tsy_A 363 AVNAKFPNAKLGQGYGMTEAGPVLAMSLGFAKEPFPVKSGACGTVVRNAEMKIVDPDTGDSLSRNQPGEICIRGHQIMKG 442 (979)
T ss_dssp HHHHHCTTCEEEECEECGGGCSEEEECGGGSSSCCCCCTTCCCEECSSCEEEEECTTSCCBCCTTCCEEEEEESTTSCSE
T ss_pred HHHHHCCCCeEEeeechhhhhHHHHhCCCCCCCccccCCCCcCcccCCcEEEEEeCCCCCCCCCCCccEEEEECCCcccc
Confidence 99999999999999999999987666543344445567789999999999999999899999999999999999999999
Q ss_pred cccCCcceeeee
Q 014952 400 TYHIYAPFLLSI 411 (415)
Q Consensus 400 Y~~~~~~~~~~~ 411 (415)
||++|+.+..+|
T Consensus 443 Y~~~p~~t~~~f 454 (979)
T 3tsy_A 443 YLNNPAATAETI 454 (979)
T ss_dssp ETTCHHHHHHHB
T ss_pred ccCChhhhhhhc
Confidence 999999998777
No 4
>3rix_A Luciferase, luciferin 4-monooxygenase; oxidoreductase, photoprotein, luminescence, aspulvinone, natural product extracts; HET: 923; 1.70A {Photinus pyralis} SCOP: e.23.1.1 PDB: 1ba3_A 1lci_A* 4e5d_A* 3ies_A* 3iep_A* 3ier_A* 4g36_A* 4g37_A* 3qya_A
Probab=100.00 E-value=8.6e-61 Score=471.75 Aligned_cols=397 Identities=27% Similarity=0.382 Sum_probs=333.6
Q ss_pred cccceeecCCCCCCCCCCCCHHhHHHhhhccCCCCcEEE---eCCCCCeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEE
Q 014952 7 HQEFIFRSKLPDIYIPNHLPLHTYCFENISQFADRPCII---NGPTGDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLL 83 (415)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~tl~~~l~~~a~~~p~~~a~~---~~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~ 83 (415)
....+|.+..|..+.+ +.|+.+.|.++++++|++++++ +...++++||+||.++++++|++|+++|+++||+|+++
T Consensus 3 ~~~~~~~~~~~~~~~~-~~tl~~~l~~~a~~~p~~~a~~a~~~~~~~~~~Ty~el~~~~~~lA~~L~~~Gv~~gd~V~i~ 81 (550)
T 3rix_A 3 DAKNIKKGPAPFYPLE-DGTAGEQLHKAMKRYALVPGTIAFTDAHIEVNITYAEYFEMSVRLAEAMKRYGLNTNHRIVVC 81 (550)
T ss_dssp CGGGSEECCCCSSCCC-CSCHHHHHHHHHHHHHTSTTCEEEEETTTCCEEEHHHHHHHHHHHHHHHHHHTCCTTCEEEEE
T ss_pred cccceeeCCCCCCCcc-cCCHHHHHHHHHHhCCCCceEEEeeecCCCcEeEHHHHHHHHHHHHHHHHHhCCCCCCEEEEE
Confidence 3456888888887776 4999999999999999999976 54457899999999999999999999999999999999
Q ss_pred cCCchhHHHHHHHHHHhCCeEeecCCCCCHHHHHHHHHhcCceEEEEcccchHHHHhhhhhcC--ceEEEeCCC--CCCc
Q 014952 84 LQNCPQFVFAFLGASYIGATSTTANPFYTPPEIAKQAIASKAKIIITQAVYNDKVRDLSEHHG--ARIVTIDPP--PENC 159 (415)
Q Consensus 84 ~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~--~~~i~~~~~--~~~~ 159 (415)
++|++++++++|||+++|++++|+++.++.+++.+++++++++++|++.+..+.+........ ..++.++.. ....
T Consensus 82 ~~n~~e~~~~~lA~~~~Gav~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (550)
T 3rix_A 82 SENSLQFFMPVLGALFIGVAVAPANDIYNERELLNSMNISQPTVVFVSKKGLQKILNVQKKLPIIQKIIIMDSKTDYQGF 161 (550)
T ss_dssp CSSCTTTHHHHHHHHHHTCEEEECCTTCCHHHHHHHHHHHCCSEEEECGGGHHHHHHHHHHCTTCCEEEETTCSSCBTTB
T ss_pred cCCcccHHHHHHHHHHcCCEEeecCCcCCHHHHHHHHHhcCCeEEEEcHHHHHHHHHHHhhCCCcceEEEEcCCccccCc
Confidence 999999999999999999999999999999999999999999999999988887776654433 345555432 2334
Q ss_pred cchhhhhhhcccCC------CCcccCCCCCeEEEecCCCCCCCCceeeechHHHHHHHhhhhcCCCCCccCCCCcEEEEc
Q 014952 160 LHFSELITQADENE------IPAVKINPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCV 233 (415)
Q Consensus 160 ~~~~~l~~~~~~~~------~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (415)
..+.++........ .+.....++++++|+|||||||.||+|+++|+++............ .+.+.+++++++.
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~th~~~~~~~~~~~~~~~-~~~~~~~~~~l~~ 240 (550)
T 3rix_A 162 QSMYTFVTSHLPPGFNEYDFVPESFDRDKTIALIMNSSGSTGLPKGVALPHRTACVRFSHARDPIF-GNQIIPDTAILSV 240 (550)
T ss_dssp CBHHHHHHHHCCTTCCTTTCCCCCCCTTTSEEEEEEC-----CCCEEEEEHHHHHHHHHHHTCTTT-SCCCCTTCEEEEC
T ss_pred ccHHHHhhccccccccccccCCCCCCCCCCEEEEEECCCcccCcchhhhhHHHHHHHHHHhhhhhc-cccCCCCcEEEEe
Confidence 45555533322211 1122234578999999999999999999999999988776665321 2457889999999
Q ss_pred cchHHHHhhHHHHHHHHHcCcEEEEcCCCCHHHHHHHHHhcCceeeecchHHHHHHHcCCCCCCCCcccceeeeecCCCC
Q 014952 234 LPLFHIYSLNSVLLCALRVGAAILIMQKFDIVKLMELVQKYKVTVAPFVPPIVLAVAKSGDVDKYDMSSIRTVMSGAAPM 313 (415)
Q Consensus 234 ~pl~~~~g~~~~~l~~l~~G~~~v~~~~~~~~~~~~~l~~~~~t~l~~~p~~l~~l~~~~~~~~~~l~~lr~v~~gG~~l 313 (415)
+|++|.+++. .++.++..|+++++.+++++..+++.++++++|++.++|+++..|++.......++++||.+++||+++
T Consensus 241 ~p~~~~~g~~-~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~i~~gG~~l 319 (550)
T 3rix_A 241 VPFHHGFGMF-TTLGYLICGFRVVLMYRFEEELFLRSLQDYKIQSALLVPTLFSFFAKSTLIDKYDLSNLHEIASGGAPL 319 (550)
T ss_dssp SCTTSHHHHH-HHHHHHHHTCEEEECSSCCHHHHHHHHHHTTCSEEEECHHHHHHHHHCCGGGGSCCTTCCEEEECSSCC
T ss_pred chHHHHHHHH-HHHHHHHcCCEEEEeCCCCHHHHHHHHHHcCCeEEEeCcHHHHHHHhCccccccCcccccEEEEecCCC
Confidence 9999999987 578889999999999999999999999999999999999999999998777777899999999999999
Q ss_pred CHHHHHHHHhhCCCCccccccccccCCccccccccccCCccccCCCcccccccCCeEEEEeCCCCCCCCCCCceeEEEec
Q 014952 314 GKELEDAVRAKLPHAKLGQGYGMTEAGPVLSMCLAFAKEPFEIKSGACGTVVRNAEMKIVDPDTGISLPRNQAGEICIRG 393 (415)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~G~p~~~~~v~i~d~~~~~~~~~g~~Gel~v~~ 393 (415)
++++.+++.+.++...+++.||+||++++++.+ .......+++|+|+|+++++|+|++++++++.|+.|||+|+|
T Consensus 320 ~~~~~~~~~~~~~~~~v~~~YG~TE~~~~~~~~-----~~~~~~~~~vG~~~~~~~~~i~d~~~~~~~~~g~~GEl~v~g 394 (550)
T 3rix_A 320 SKEVGEAVAKRFHLPGIRQGYGLTETTSAILIT-----PEGDDKPGAVGKVVPFFEAKVVDLDTGKTLGVNQRGELCVRG 394 (550)
T ss_dssp CHHHHHHHHHHTTCSCCEEEEECGGGSSEEEEC-----CTTCCCTTEEEEECTTCEEEEECTTTCCBCCTTCCEEEEEES
T ss_pred CHHHHHHHHHHcCCCccccccCcCccccceecC-----CCCCCCCCCcccccCCcEEEEEeCCCCcCCCCCCCeEEEEeC
Confidence 999999999999545699999999999766554 223456789999999999999998889999999999999999
Q ss_pred CccccccccCCcceeeee
Q 014952 394 AQIMKGTYHIYAPFLLSI 411 (415)
Q Consensus 394 ~~~~~gY~~~~~~~~~~~ 411 (415)
|+++.|||++|+.+...|
T Consensus 395 ~~v~~GY~~~~~~t~~~~ 412 (550)
T 3rix_A 395 PMIMSGYVNNPEATNALI 412 (550)
T ss_dssp TTSCSEETTCHHHHHHHB
T ss_pred CCcchhhcCChhhhhhhc
Confidence 999999999999987766
No 5
>3g7s_A Long-chain-fatty-acid--COA ligase (FADD-1); protein structure initiative, PSI-II, NYSGXRC, 11193J, structural genomics; 2.15A {Archaeoglobus fulgidus dsm 4304}
Probab=100.00 E-value=2.7e-60 Score=468.09 Aligned_cols=386 Identities=26% Similarity=0.428 Sum_probs=330.7
Q ss_pred ecCCCCCCCCCCCCHHhHHHhhhccCCCCcEEEeCCCC------CeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCC
Q 014952 13 RSKLPDIYIPNHLPLHTYCFENISQFADRPCIINGPTG------DVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQN 86 (415)
Q Consensus 13 ~~~~~~~~~~~~~tl~~~l~~~a~~~p~~~a~~~~~~~------~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~ 86 (415)
...+|+.+.| .+|+.+.|.++++++|+++|+++.+.. +++||+||.++++++|+.|+++|+++||+|+++++|
T Consensus 8 ~~~~p~~~~~-~~~l~~~l~~~a~~~p~~~A~~~~~~~~~~~~~~~~Ty~el~~~~~~lA~~L~~~Gv~~gd~V~i~~~~ 86 (549)
T 3g7s_A 8 KIGFPSLYYP-KISLADRIDAAAEKFGEKTAIISAEPKFPSEFPESMNFLEICEVTKKLASGISRKGVRKGEHVGVCIPN 86 (549)
T ss_dssp CCCCCCCCCC-CCCTTHHHHHHHHHHTTSEEEEEESSCCCCSSCSEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECCS
T ss_pred ccCCCCCCcC-CCCHHHHHHHHHHhCCCceEEEeCCCcccccccceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCC
Confidence 3457777766 599999999999999999999987421 899999999999999999999999999999999999
Q ss_pred chhHHHHHHHHHHhCCeEeecCCCCCHHHHHHHHHhcCceEEEEcccchHHHHhhhhhcCce-EEEeCCCCCCccchhhh
Q 014952 87 CPQFVFAFLGASYIGATSTTANPFYTPPEIAKQAIASKAKIIITQAVYNDKVRDLSEHHGAR-IVTIDPPPENCLHFSEL 165 (415)
Q Consensus 87 ~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~-~i~~~~~~~~~~~~~~l 165 (415)
++++++++|||+++|++++|++|.++.+++.+++++++++++|++....+.+.......... ++..+. ....++++
T Consensus 87 ~~~~~~~~lA~~~~G~~~vpl~~~~~~~~l~~il~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~ 163 (549)
T 3g7s_A 87 SIDYVMTIYALWRVAATPVPINPMYKSFELEHILNDSEATTLVVHSMLYENFKPVLEKTGVERVFVVGG---EVNSLSEV 163 (549)
T ss_dssp SHHHHHHHHHHHHTTCEEEECCTTCCHHHHHHHHHHTTCSEEEEEGGGHHHHHHHHTTSCCCEEEEETC---SSSCHHHH
T ss_pred CHHHHHHHHHHHHhCCEEEccCCCCCHHHHHHHHHhcCCCEEEEChHHHHHHHHHHhhCCCcEEEEeCC---CCcCHHHH
Confidence 99999999999999999999999999999999999999999999999888777766555543 444442 33456666
Q ss_pred hhhcccCCCCcccCCC-CCeEEEecCCCCCCCCceeeechHHHHHHHhhhhcCCCCCccCCCCcEEEEccchHHHHhhHH
Q 014952 166 ITQADENEIPAVKINP-DDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNS 244 (415)
Q Consensus 166 ~~~~~~~~~~~~~~~~-~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~ 244 (415)
...... ..+.....+ +++++|+|||||||.||+|+++|+++......... .+.+.++++++..+|++|..++..
T Consensus 164 ~~~~~~-~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~----~~~~~~~d~~~~~~p~~~~~~~~~ 238 (549)
T 3g7s_A 164 MDSGSE-DFENVKVNPEEDVALIPYTGGTTGMPKGVMLTHFNLAANALQLAV----ATGLSHMDTIVGCMPMFHSAEFGL 238 (549)
T ss_dssp HHHSCS-CCCCCCCCTTTSEEECCEECCCCC-CEEEEEEHHHHHHHHHHHHH----HHCCCTTCEEECCSCTTSHHHHHH
T ss_pred HhcCcc-ccccccCCCCCCEEEEEECCCccCCCceEEEcHHHHHHHHHHHHH----HcCCCCCCEEEEeCcHHHHHHHHH
Confidence 333222 223333344 89999999999999999999999999998887776 456889999999999999999885
Q ss_pred HHHHHHHcCcEEEEcCCCCHHHHHHHHHhcCceeeecchHHHHHHHcCCCCC--CCCcccceeeeecCCCCCHHHHHHHH
Q 014952 245 VLLCALRVGAAILIMQKFDIVKLMELVQKYKVTVAPFVPPIVLAVAKSGDVD--KYDMSSIRTVMSGAAPMGKELEDAVR 322 (415)
Q Consensus 245 ~~l~~l~~G~~~v~~~~~~~~~~~~~l~~~~~t~l~~~p~~l~~l~~~~~~~--~~~l~~lr~v~~gG~~l~~~~~~~~~ 322 (415)
++.++..|+++++.+.+++..+++.++++++|+++++|+++..|++..... ..+++++|.+++||+++++++.+++.
T Consensus 239 -~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~~~~gg~~l~~~~~~~~~ 317 (549)
T 3g7s_A 239 -VNLMVTVGNEYVVMGMFNQEMLAENIEKYKGTFSWAVPPALNVLVNTLESSNKTYDWSYLKVFATGAWPVAPALVEKLL 317 (549)
T ss_dssp -HTTHHHHCCEEEEESSCCHHHHHHHHHHTTCCEEEECHHHHHHHHHHHHHSCCCCCCTTCCEEEEESSCCCHHHHHHHH
T ss_pred -HHHHHhcCceEEEcCCCCHHHHHHHHHHhCCeEEEeCCHHHHHHHhhhhhhcccCCccceeEEEeCCccCCHHHHHHHH
Confidence 788899999999999999999999999999999999999999998764332 26789999999999999999999999
Q ss_pred hh----CC--CCccccccccccCCccccccccccCCccccCCCcccccccCCeEEEEeCCCCCCCCCCCceeEEEecCcc
Q 014952 323 AK----LP--HAKLGQGYGMTEAGPVLSMCLAFAKEPFEIKSGACGTVVRNAEMKIVDPDTGISLPRNQAGEICIRGAQI 396 (415)
Q Consensus 323 ~~----~~--~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~G~p~~~~~v~i~d~~~~~~~~~g~~Gel~v~~~~~ 396 (415)
+. ++ +.++++.||+||++.+++.+. .......+++|+|+++++++|+|++++++++.|+.|||+|+||++
T Consensus 318 ~~~~~~~~~~~~~~~~~YG~TE~~~~~~~~~----~~~~~~~~~~G~p~~~~~~~i~d~~~g~~~~~g~~GEl~v~g~~v 393 (549)
T 3g7s_A 318 KLAAEKCNNPRLRHNQIWGMTEACPMVTTNP----PLRLDKSTTQGVPMSDIELKVISLEDGRELGVGESGEIVIRGPNI 393 (549)
T ss_dssp HHHHHHSSCTTCEEEEEEECGGGSSEEEECC----GGGGGGTTSCCEECTTCEEEEECSSSCCEECTTCCEEEEEESTTS
T ss_pred HHHHhhcCCccccccceEeccccchhhhcCC----ccccCcCCCccccCCCCEEEEEeCCCCcCCCCCCceEEEEECcch
Confidence 88 62 388999999999997666542 112245688999999999999998889999999999999999999
Q ss_pred ccccccCCcceeeeee
Q 014952 397 MKGTYHIYAPFLLSIV 412 (415)
Q Consensus 397 ~~gY~~~~~~~~~~~~ 412 (415)
+.|||++|+.+..+|+
T Consensus 394 ~~GY~~~~~~t~~~f~ 409 (549)
T 3g7s_A 394 FKGYWKREKENQECWW 409 (549)
T ss_dssp CSEETTCTTGGGTSEE
T ss_pred hhhhCCChhhhhhhhh
Confidence 9999999999999985
No 6
>3etc_A AMP-binding protein; adenylate-forming acyl-COA synthetase ligase, ligase; HET: PGE 1PE EPE; 2.10A {Methanosarcina acetivorans}
Probab=100.00 E-value=2.9e-58 Score=455.30 Aligned_cols=383 Identities=19% Similarity=0.250 Sum_probs=322.8
Q ss_pred CCCCCCCCCHH-hHHHhhhccCCCCcEEEeCC---CCCeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHH
Q 014952 18 DIYIPNHLPLH-TYCFENISQFADRPCIINGP---TGDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFA 93 (415)
Q Consensus 18 ~~~~~~~~tl~-~~l~~~a~~~p~~~a~~~~~---~~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~ 93 (415)
.|+.|+..|+. ++|.++++++|+++|+++.+ .++.+||+||.++++++|++|+++|+++||+|+++++|+++++++
T Consensus 48 ~~~~~~~~n~~~~~l~~~a~~~pd~~Al~~~~~~g~~~~~Ty~eL~~~~~~~A~~L~~~Gv~~Gd~V~l~~~~~~e~~~~ 127 (580)
T 3etc_A 48 KILVPENFNFAYDVVDVYARDSPEKLAMIWCDDYGNEKIFTFKDLKYYSDKAANFFVKHGIGKGDYVMLTLKSRYDFWYC 127 (580)
T ss_dssp CBCCCSSCCHHHHTHHHHHHHCTTCEEEEEEESSSCEEEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECTTCTHHHHH
T ss_pred CCCCcccchHHHHHHHHHHhhCCCCEEEEEEcCCCCEeEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHH
Confidence 56677888988 99999999999999998632 246899999999999999999999999999999999999999999
Q ss_pred HHHHHHhCCeEeecCCCCCHHHHHHHHHhcCceEEEEcccch--HHHHhhhhhcC---ceEEEeCCC-CCCccchhhhhh
Q 014952 94 FLGASYIGATSTTANPFYTPPEIAKQAIASKAKIIITQAVYN--DKVRDLSEHHG---ARIVTIDPP-PENCLHFSELIT 167 (415)
Q Consensus 94 ~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~vl~~~~~~--~~~~~~~~~~~---~~~i~~~~~-~~~~~~~~~l~~ 167 (415)
+|||+++|++++|+++.++.+++.+++++++++++|++.+.. +.+........ ..++.++.. ..++..+.+.+.
T Consensus 128 ~lA~~~~Gav~vpl~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (580)
T 3etc_A 128 MLGLHKLGAIAVPATHMLKTRDIVYRIEKAGLKMIVCIAEDDVPEQVDEAHAECGDIPLKKAKVGGDVLEGWIDFRKELE 207 (580)
T ss_dssp HHHHHHHTCEEEECCTTCCHHHHHHHHHHHTCCEEEEESSTTHHHHHHHHHHHHCSCCCEEEEESSSCCTTCEEHHHHHH
T ss_pred HHHHHhCCEEEEeCCccCCHHHHHHHHHhcCCCEEEEecchhHHHHHHHHhhhCCCcceEEEEeCCccccccccHHHHHh
Confidence 999999999999999999999999999999999999988765 55555443322 445555533 445566666633
Q ss_pred hcccCCCCc---ccCCCCCeEEEecCCCCCCCCceeeechHHHHHHHhhhhcCCCCCccCCCCcEEEEccchHHHHhhHH
Q 014952 168 QADENEIPA---VKINPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNS 244 (415)
Q Consensus 168 ~~~~~~~~~---~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~ 244 (415)
........+ ....++++++|+|||||||.||+|.++|.++......... ...+.+++++++..|++|..+.+.
T Consensus 208 ~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~ 283 (580)
T 3etc_A 208 ESSPIFERPTGEVSTKNEDICLVYFSSGTAGFPKMVEHDNTYPLGHILTAKY----WQNVEDDGLHYTVADSGWGKCVWG 283 (580)
T ss_dssp HSCSCCCCCCGGGSCCTTSEEEEEEECCSSSSCEEEEEETTHHHHHHHHHHT----TSCCCTTCEEEECCCTTSTHHHHH
T ss_pred hCCcccccCccccCCCCCCcEEEEEeCCCCCCccEEEeccHHHHHHHHHHHH----hhCCCCCceEEEeCChHHHHHHHH
Confidence 333222111 3567899999999999999999999999998877766554 346788999999999999888876
Q ss_pred HHHHHHHcCcEEEEc--CCCCHHHHHHHHHhcCceeeecchHHHHHHHcCCCCCCCCcccceeeeecCCCCCHHHHHHHH
Q 014952 245 VLLCALRVGAAILIM--QKFDIVKLMELVQKYKVTVAPFVPPIVLAVAKSGDVDKYDMSSIRTVMSGAAPMGKELEDAVR 322 (415)
Q Consensus 245 ~~l~~l~~G~~~v~~--~~~~~~~~~~~l~~~~~t~l~~~p~~l~~l~~~~~~~~~~l~~lr~v~~gG~~l~~~~~~~~~ 322 (415)
.++.++..|+++++. +.+++..+++.++++++|++.++|++++.|.+. .....++++||.+++||+++++++.+++.
T Consensus 284 ~~~~~l~~G~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~-~~~~~~l~~lr~i~~gGe~l~~~~~~~~~ 362 (580)
T 3etc_A 284 KLYGQWIAGCAVFVYDYDRFEAKNMLEKASKYGVTTFCAPPTIYRFLIKE-DLSHYNFSTLKYAVVAGEPLNPEVFNRFL 362 (580)
T ss_dssp TTHHHHHTTCEEEEEECSSCCHHHHHHHHHHHTCCEEEECHHHHHHHHTS-CC---CCTTCCEEEECSSCCCHHHHHHHH
T ss_pred HHHHHHhCCcEEEEecCCCCCHHHHHHHHHHHCCeEEEccHHHHHHHHhc-ccccCCCccceEEEEccCCCCHHHHHHHH
Confidence 678899999999987 468999999999999999999999999999876 34556789999999999999999999999
Q ss_pred hhCCCCccccccccccCCccccccccccCCccccCCCcccccccCCeEEEEeCCCCCCCCCCCceeEEEec-----Cccc
Q 014952 323 AKLPHAKLGQGYGMTEAGPVLSMCLAFAKEPFEIKSGACGTVVRNAEMKIVDPDTGISLPRNQAGEICIRG-----AQIM 397 (415)
Q Consensus 323 ~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~G~p~~~~~v~i~d~~~~~~~~~g~~Gel~v~~-----~~~~ 397 (415)
+.+ ++++++.||+||++..++.. .......+++|+|+|+++++|+|+ +|++|+.|+.|||+|+| +.++
T Consensus 363 ~~~-g~~i~~~YG~TE~~~~~~~~-----~~~~~~~~~~G~p~~~~~v~ivd~-~g~~~~~g~~GEl~v~~~~g~~~~~~ 435 (580)
T 3etc_A 363 EFT-GIKLMEGFGQTETVVTIATF-----PWMEPKPGSIGKPTPGYKIELMDR-DGRLCEVGEEGEIVINTMEGKPVGLF 435 (580)
T ss_dssp HHH-SCCCEEEECCTTSSCCEECC-----TTSCCCTTCCBEECTTCEEEEECT-TSCBCCTTCCEEEEEECTTCCCTTCC
T ss_pred HHh-CCeEecccccccccceeecC-----CCCCCCCCccccCCCCCEEEEECC-CCCCCCCCCceEEEEecCCCCCCeee
Confidence 998 89999999999998655443 223456789999999999999995 59999999999999997 7899
Q ss_pred cccccCCcceeeeee
Q 014952 398 KGTYHIYAPFLLSIV 412 (415)
Q Consensus 398 ~gY~~~~~~~~~~~~ 412 (415)
.|||++|+++..+|.
T Consensus 436 ~gY~~~p~~t~~~f~ 450 (580)
T 3etc_A 436 VHYGKDPERTEETWH 450 (580)
T ss_dssp CEETTCHHHHHHHEE
T ss_pred ccccCCHhHHHhhcC
Confidence 999999999987763
No 7
>4fuq_A Malonyl COA synthetase; ANL superfamily, methylma malonate, ligase; HET: MSE; 1.70A {Rhodopseudomonas palustris} PDB: 4fut_A* 4gxr_A* 4gxq_A*
Probab=100.00 E-value=9.3e-59 Score=452.18 Aligned_cols=370 Identities=24% Similarity=0.359 Sum_probs=316.1
Q ss_pred HhHHHhhhccCCCCcEEEeC-CCCCeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHHhCCeEee
Q 014952 28 HTYCFENISQFADRPCIING-PTGDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGATSTT 106 (415)
Q Consensus 28 ~~~l~~~a~~~p~~~a~~~~-~~~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~ 106 (415)
.++|.+.++++|++.++... ..++++||+||.++++++|+.|+++|+++||+|+++++|++++++++|||+++|++++|
T Consensus 3 ~~l~~~~a~~~p~~~a~~~~~~~~~~~Ty~eL~~~~~~lA~~L~~~Gv~~gd~V~i~~~~~~~~~~~~lA~~~~Ga~~vp 82 (503)
T 4fuq_A 3 ANLFARLFDKLDDPHKLAIETAAGDKISYAELVARAGRVANVLVARGLQVGDRVAAQTEKSVEALVLYLATVRAGGVYLP 82 (503)
T ss_dssp CCHHHHHHSCCSCTTSEEEEETTCCEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECCSCHHHHHHHHHHHHTTCEEEE
T ss_pred hhHHHHHHHhCCCCceEEEecCCCcEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHcCcEEEe
Confidence 35788899999999998742 23789999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCHHHHHHHHHhcCceEEEEcccchHHHHhhhhhcCceEEEeCCCCCCccchhhhhhhcccCCCCcccCCCCCeEE
Q 014952 107 ANPFYTPPEIAKQAIASKAKIIITQAVYNDKVRDLSEHHGARIVTIDPPPENCLHFSELITQADENEIPAVKINPDDVVA 186 (415)
Q Consensus 107 l~~~~~~~~~~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~ 186 (415)
+++.++.+++.+++++++++++|++.+..+.+..........++.++..... .+.+. ........+.....++++++
T Consensus 83 l~~~~~~~~l~~il~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-~~~~~~~~~~~~~~~~d~a~ 159 (503)
T 4fuq_A 83 LNTAYTLHELDYFITDAEPKIVVCDPSKRDGIAAIAAKVGATVETLGPDGRG--SLTDA-AAGASEAFATIDRGADDLAA 159 (503)
T ss_dssp CCTTCCHHHHHHHHHHHCCSEEEECGGGTTTTHHHHHHHTCEEEECCTTSCS--HHHHH-HHTSCSCCCCCCCCTTSEEE
T ss_pred cCCCCCHHHHHHHHHhcCCcEEEECchhhHHHHHHHhhcCceEEEecCCccc--ccchh-hhcCCCCcCcCCCCCCCeEE
Confidence 9999999999999999999999999887665555544444555555433221 22222 11222233344567899999
Q ss_pred EecCCCCCCCCceeeechHHHHHHHhhhhcCCCCCccCCCCcEEEEccchHHHHhhHHHHHHHHHcCcEEEEcCCCCHHH
Q 014952 187 LPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIMQKFDIVK 266 (415)
Q Consensus 187 i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~l~~l~~G~~~v~~~~~~~~~ 266 (415)
|+|||||||.||+|+++|+++.+....... .+.+.+++++++.+|++|.+++...++.++..|+++++.+.+++..
T Consensus 160 i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~----~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~~~~~~~~~~~~ 235 (503)
T 4fuq_A 160 ILYTSGTTGRSKGAMLSHDNLASNSLTLVD----YWRFTPDDVLIHALPIYHTHGLFVASNVTLFARGSMIFLPKFDPDK 235 (503)
T ss_dssp EEECC--CCSCCEEEEEHHHHHHHHHHHHH----HTTCCTTCEEEECSCSSSHCCCCCCHHHHHHTTCEEEECSSCCHHH
T ss_pred EEECCCcccCCeEEEEeHHHHHHHHHHHHH----HhCCCCCCEEEEeCChHHHHHHHHHHHHHHHhCCEEEEcCCCCHHH
Confidence 999999999999999999999998888777 4568899999999999999997666788999999999999999999
Q ss_pred HHHHHHhcCceeeecchHHHHHHHcCCCCCCCCcccceeeeecCCCCCHHHHHHHHhhCCCCccccccccccCCcccccc
Q 014952 267 LMELVQKYKVTVAPFVPPIVLAVAKSGDVDKYDMSSIRTVMSGAAPMGKELEDAVRAKLPHAKLGQGYGMTEAGPVLSMC 346 (415)
Q Consensus 267 ~~~~l~~~~~t~l~~~p~~l~~l~~~~~~~~~~l~~lr~v~~gG~~l~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~ 346 (415)
+++.++ ++|++.++|+++..+++........++++|.+++||+++++++.+++.+.+ +.++++.||+||++...+..
T Consensus 236 ~~~~i~--~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~~~~gg~~l~~~~~~~~~~~~-~~~~~~~YG~TE~~~~~~~~ 312 (503)
T 4fuq_A 236 ILDLMA--RATVLMGVPTFYTRLLQSPRLTKETTGHMRLFISGSAPLLADTHREWSAKT-GHAVLERYGMTETNMNTSNP 312 (503)
T ss_dssp HHHHHT--TCCEEEECHHHHHHHHTCTTCSTTTTTTCCEEEECSSCCCHHHHHHHHHHH-SCCEEECCEETTTEECBCCC
T ss_pred HHHHHh--hcCEEEEHHHHHHHHHhCCCccccchhhcEEEEECCCCCCHHHHHHHHHHh-CCCccceEcccccCcccccC
Confidence 999998 899999999999999998877777889999999999999999999999998 88999999999998653321
Q ss_pred ccccCCccccCCCcccccccCCeEEEEeCCCCCCCCCCCceeEEEecCccccccccCCcceeeeee
Q 014952 347 LAFAKEPFEIKSGACGTVVRNAEMKIVDPDTGISLPRNQAGEICIRGAQIMKGTYHIYAPFLLSIV 412 (415)
Q Consensus 347 ~~~~~~~~~~~~~~~G~p~~~~~v~i~d~~~~~~~~~g~~Gel~v~~~~~~~gY~~~~~~~~~~~~ 412 (415)
.......+++|+|+|+++++|+|++++++++.|+.|||+|+||++++|||++|+.+..+|.
T Consensus 313 -----~~~~~~~~~~G~p~~~~~~~i~d~~~g~~~~~g~~GEl~v~g~~v~~GY~~~~~~t~~~f~ 373 (503)
T 4fuq_A 313 -----YDGDRVPGAVGPALPGVSARVTDPETGKELPRGDIGMIEVKGPNVFKGYWRMPEKTKSEFR 373 (503)
T ss_dssp -----SSSCCCTTEEEEBCTTCEEEEECTTTCCBCCTTCCEEEEEESTTSCCCBTTCHHHHHHTBC
T ss_pred -----CCCCCcCCccccCCCCeEEEEEECCCCCCCcCCCceEEEEECCchhhhhcCChhhhHhhhC
Confidence 2344566889999999999999988899999999999999999999999999999988774
No 8
>3o83_A Peptide arylation enzyme; ligase, adenylation of 2,3-dihydroxybenzoate and transfer to pantetheine cofactor of BASF; HET: IXN; 1.90A {Acinetobacter baumannii} SCOP: e.23.1.0 PDB: 3o82_A* 3o84_A* 3u16_A* 3u17_A*
Probab=100.00 E-value=8e-59 Score=456.92 Aligned_cols=378 Identities=21% Similarity=0.277 Sum_probs=317.8
Q ss_pred CCCCCCHHhHHHhhhccCCCCcEEEeCCCCCeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHHh
Q 014952 21 IPNHLPLHTYCFENISQFADRPCIINGPTGDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYI 100 (415)
Q Consensus 21 ~~~~~tl~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~ 100 (415)
.+.+.|+.++|.++++++|+++|+++. ++++||+||.++++++|+.|+++|+++||+|+++++|++++++++|||+++
T Consensus 26 ~~~~~tl~~~l~~~a~~~p~~~Al~~~--~~~~Ty~eL~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~~~~~~~lA~~~~ 103 (544)
T 3o83_A 26 YWIDQPLTRILTVGVQSHPHSLAIICG--ERQLSYIELDRLSTNLATRLAEKGLGKGDTALVQLPNVAEFYIVFFALLKA 103 (544)
T ss_dssp SCCCCCTTHHHHHHHHHCTTSEEEEET--TEEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEECCCSSHHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHhCCCceEEEcC--CCceeHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHh
Confidence 345789999999999999999999997 899999999999999999999999999999999999999999999999999
Q ss_pred CCeEeecCCCCCHHHHHHHHHhcCceEEEEcccch-----HHHHhhhhh-cCc-eEEEeCCCCCCccchhhhhhhcccCC
Q 014952 101 GATSTTANPFYTPPEIAKQAIASKAKIIITQAVYN-----DKVRDLSEH-HGA-RIVTIDPPPENCLHFSELITQADENE 173 (415)
Q Consensus 101 G~~~v~l~~~~~~~~~~~~l~~~~~~~vl~~~~~~-----~~~~~~~~~-~~~-~~i~~~~~~~~~~~~~~l~~~~~~~~ 173 (415)
|++++|+++.++.+++.++++++++++++++.... ......... ... .++..+.. .....+.++........
T Consensus 104 Gav~vpl~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 182 (544)
T 3o83_A 104 GVVVLNALYSHRQYELNAFIKQIQPKLLIGSRQHEVFSNNQFIDSLHDVNLSPEIILMLNHQ-ATDFGLLDWIETPAETF 182 (544)
T ss_dssp TCEEEECCTTCCHHHHHHHHHHHCCSEEEEETTSGGGSSSHHHHHHHHTTCCCSEEEEETCC-TTSEEHHHHHHSCCSSC
T ss_pred CcEEecCCCCCCHHHHHHHHHhcCeeEEEEccccccccHHHHHHHHhhcccCcceEEEecCC-ccccchhhhhhcccccc
Confidence 99999999999999999999999999999987653 222222221 122 34444332 22233444422222222
Q ss_pred CCcccCCCCCeEEEecCCCCCCCCceeeechHHHHHHHhhhhcCCCCCccCCCCcEEEEccchHHHHhhHH-HHHHHHHc
Q 014952 174 IPAVKINPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNS-VLLCALRV 252 (415)
Q Consensus 174 ~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~-~~l~~l~~ 252 (415)
.+.....++++++|+|||||||.||+|+++|+++......... .+.+.+++++++.+|++|.+++.. .++.++..
T Consensus 183 ~~~~~~~~~d~a~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~----~~~~~~~d~~l~~~p~~h~~~~~~~~~~~~l~~ 258 (544)
T 3o83_A 183 VDFSSTPADEVAFFQLSGGSTGTPKLIPRTHNDYDYSVRASAE----ICGLNSNTRLLCALPAPHNFMLSSPGALGVLHA 258 (544)
T ss_dssp CCCCCCCTTSEEEEEECCC--CCCCEEEEEHHHHHHHHHHHHH----HTTCCTTCEEEECSCTTSHHHHHSSHHHHHHHT
T ss_pred cccccCCccceEEEEECCCcccCCceEEechHHHHHHHHHHHH----HhCCCCCCeEEEecCcceEeecchHHHHHHHHc
Confidence 2234567899999999999999999999999999998888777 456889999999999999998864 57889999
Q ss_pred CcEEEEcCCCCHHHHHHHHHhcCceeeecchHHHHHHHcCCCCCCCCcccceeeeecCCCCCHHHHHHHHhhCCCCcccc
Q 014952 253 GAAILIMQKFDIVKLMELVQKYKVTVAPFVPPIVLAVAKSGDVDKYDMSSIRTVMSGAAPMGKELEDAVRAKLPHAKLGQ 332 (415)
Q Consensus 253 G~~~v~~~~~~~~~~~~~l~~~~~t~l~~~p~~l~~l~~~~~~~~~~l~~lr~v~~gG~~l~~~~~~~~~~~~~~~~~~~ 332 (415)
|+++++.+.+++..+++.++++++|++.++|+++..+++.......++++||.+++||+++++++.+++.+.+ ++++++
T Consensus 259 G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~-~~~~~~ 337 (544)
T 3o83_A 259 GGCVVMAPNPEPLNCFSIIQRHQVNMASLVPSAVIMWLEKAAQYKDQIQSLKLLQVGGASFPESLARQVPEVL-NCKLQQ 337 (544)
T ss_dssp TCEEEECSSCCHHHHHHHHHHHTCCEEEECHHHHHHHHHHHTTTHHHHTTCCEEEEESSCCCHHHHTHHHHHH-CSEEEE
T ss_pred CCEEEECCCCCHHHHHHHHHHHCCCEEEechHHHHHHHhchhhccccCCcceEEEEcCCCCCHHHHHHHHHHh-CCcEEe
Confidence 9999999999999999999999999999999999999887766666789999999999999999999999999 899999
Q ss_pred ccccccCCccccccccccCCccccCCCcccccc-cCCeEEEEeCCCCCCCCCCCceeEEEecCccccccccCCcceeeee
Q 014952 333 GYGMTEAGPVLSMCLAFAKEPFEIKSGACGTVV-RNAEMKIVDPDTGISLPRNQAGEICIRGAQIMKGTYHIYAPFLLSI 411 (415)
Q Consensus 333 ~YG~tE~~~~~~~~~~~~~~~~~~~~~~~G~p~-~~~~v~i~d~~~~~~~~~g~~Gel~v~~~~~~~gY~~~~~~~~~~~ 411 (415)
.||+||++...+.. .........++|+|+ ++++++|+| +++++++.|+.|||+|+||+++.|||++|+.+..+|
T Consensus 338 ~YG~TE~~~~~~~~----~~~~~~~~~~~G~p~~~~~~~~i~d-~~~~~~~~g~~GEl~v~g~~v~~GY~~~~~~t~~~f 412 (544)
T 3o83_A 338 VFGMAEGLVNYTRL----DDSDEQIFTTQGRPISSDDEIKIVD-EQYREVPEGEIGMLATRGPYTFCGYYQSPEHNSQVF 412 (544)
T ss_dssp EEECTTSCEEECCT----TSCHHHHHHCCCEESCTTCEEEEEC-TTSCBCCTTCCEEEEEECTTSCSCCTTCHHHHHHHB
T ss_pred eeccccccceeecC----CCchhhccCCCceecCCCcEEEEEC-CCCCCCCCCCeeEEEEecCCcchhhcCChhhhhhhC
Confidence 99999988433221 122223456899997 899999999 679999999999999999999999999999988777
No 9
>2v7b_A Benzoate-coenzyme A ligase; benzoate oxidation, benzoate COA ligase; 1.84A {Burkholderia xenovorans}
Probab=100.00 E-value=1.3e-57 Score=447.32 Aligned_cols=379 Identities=24% Similarity=0.327 Sum_probs=307.1
Q ss_pred CCCCCCCC-HHhHHHhhhccCCCCcEEEeCCCCCeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHH
Q 014952 19 IYIPNHLP-LHTYCFENISQFADRPCIINGPTGDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGA 97 (415)
Q Consensus 19 ~~~~~~~t-l~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~ 97 (415)
...|..+| +.+.+.++++ +|+++|+++. ++++||+||.++++++|+.|+++|+++||+|+++++|+.++++++|||
T Consensus 17 ~~~p~~~~~~~~~l~~~~~-~p~~~A~~~~--~~~~Ty~el~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~~~~~~~lA~ 93 (529)
T 2v7b_A 17 EAPPALFNFAAYLFRLNET-RAGKTAYIDD--TGSTTYGELEERARRFASALRTLGVHPEERILLVMLDTVALPVAFLGA 93 (529)
T ss_dssp -----CCCHHHHHHHHTGG-GTTSEEEECS--SCEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECCSSTHHHHHHHHH
T ss_pred ecCccceeHHHHHHHhhhc-cCCceEEEeC--CCCccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHHH
Confidence 34455566 7888888888 9999999987 789999999999999999999999999999999999999999999999
Q ss_pred HHhCCeEeecCCCCCHHHHHHHHHhcCceEEEEcccchHHHHhhhhh---cCceEEEeCCCCC---Cccchhhhhhhccc
Q 014952 98 SYIGATSTTANPFYTPPEIAKQAIASKAKIIITQAVYNDKVRDLSEH---HGARIVTIDPPPE---NCLHFSELITQADE 171 (415)
Q Consensus 98 ~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~vl~~~~~~~~~~~~~~~---~~~~~i~~~~~~~---~~~~~~~l~~~~~~ 171 (415)
+++|++++|+++.++.+++.+++++++++++|++.+..+.+...... ....++..+.... ....++++... ..
T Consensus 94 ~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 172 (529)
T 2v7b_A 94 LYAGVVPVVANTLLTPADYVYMLTHSHARAVIASGALVQNVTQALESAEHDGCQLIVSQPRESEPRLAPLFEELIDA-AA 172 (529)
T ss_dssp HHHTCEEEECCTTCCHHHHHHHHHHHTCSEEEEEGGGHHHHHHHHHCC---CCEEEEECC------CCCBHHHHHHT-SC
T ss_pred HHcCceEEecCcccCHHHHHHHHhccCCeEEEechhhhhHHHHHHhhccccCceEEEecccccccccccchhhhhcc-CC
Confidence 99999999999999999999999999999999998877666554321 1133444443211 12245555221 22
Q ss_pred CCCCcccCCCCCeEEEecCCCCCCCCceeeechHHH-HHHHhhhhcCCCCCccCCCCcEEEEccchHHHHhhHHHHHHHH
Q 014952 172 NEIPAVKINPDDVVALPYSSGTTGLPKGVMLTHKGL-VTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCAL 250 (415)
Q Consensus 172 ~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l-~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~l~~l 250 (415)
...+.....++++++|+|||||||.||+|+++|+++ ......... .+.+.+++++++.+|++|..++...++.++
T Consensus 173 ~~~~~~~~~~~d~a~i~~TSGTTG~PKgv~~sh~~l~~~~~~~~~~----~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l 248 (529)
T 2v7b_A 173 PAAKAAATGCDDIAFWLYSSGSTGKPKGTVHTHANLYWTAELYAKP----ILGIAENDVVFSAAKLFFAYGLGNGLTFPL 248 (529)
T ss_dssp CCSSCCCCCTTSEEEEEEC-----CCCEEEEEHHHHHHHHHHTCCC----CCCCCTTCEEEESSCTTSHHHHHHHTHHHH
T ss_pred CcccccCCCCCCeEEEEECCCCCCCCceEEEEhhHHHHHHHHHhhh----ccCCCCCcEEEEeecHHHHHHHHHHHHHHH
Confidence 222334567799999999999999999999999999 555444433 456789999999999999999876677899
Q ss_pred HcCcEEEEc-CCCCHHHHHHHHHhcCceeeecchHHHHHHHcCCCCCCCCcccceeeeecCCCCCHHHHHHHHhhCCCCc
Q 014952 251 RVGAAILIM-QKFDIVKLMELVQKYKVTVAPFVPPIVLAVAKSGDVDKYDMSSIRTVMSGAAPMGKELEDAVRAKLPHAK 329 (415)
Q Consensus 251 ~~G~~~v~~-~~~~~~~~~~~l~~~~~t~l~~~p~~l~~l~~~~~~~~~~l~~lr~v~~gG~~l~~~~~~~~~~~~~~~~ 329 (415)
..|+++++. +.+++..+++.++++++|++.++|+++..+++..........++|.+++||++++.++.+++.+.+ +++
T Consensus 249 ~~G~~~v~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~~~~gGe~l~~~~~~~~~~~~-g~~ 327 (529)
T 2v7b_A 249 SVGATAILMAERPTADAIFARLVEHRPTVFYGVPTLYANMLVSPNLPARADVAIRICTSAGEALPREIGERFTAHF-GCE 327 (529)
T ss_dssp HHTCEEECCCSCCCHHHHHHHHHHSCCSEEEECHHHHHHHHTCTTCCCGGGCCCCEEEECSSCCCHHHHHHHHHHH-SCC
T ss_pred hcCcEEEEecCCCCHHHHHHHHHHhCCEEEEecHHHHHHHHhCcccccccCCceEEEEEcCCCCCHHHHHHHHHHh-CCc
Confidence 999999988 568999999999999999999999999999887544433124899999999999999999999998 899
Q ss_pred cccccccccCCccccccccccCCccccCCCcccccccCCeEEEEeCCCCCCCCCCCceeEEEecCccccccccCCcceee
Q 014952 330 LGQGYGMTEAGPVLSMCLAFAKEPFEIKSGACGTVVRNAEMKIVDPDTGISLPRNQAGEICIRGAQIMKGTYHIYAPFLL 409 (415)
Q Consensus 330 ~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~G~p~~~~~v~i~d~~~~~~~~~g~~Gel~v~~~~~~~gY~~~~~~~~~ 409 (415)
+++.||+||+++++..+ .......+++|+|+++++++|+| ++|++++.|+.|||+|+||+++.|||++|+.+..
T Consensus 328 i~~~YG~TE~~~~~~~~-----~~~~~~~~~~G~p~~~~~~~i~d-~~g~~~~~g~~GEl~v~g~~~~~gY~~~~~~t~~ 401 (529)
T 2v7b_A 328 ILDGIGSTEMLHIFLSN-----RAGAVEYGTTGRPVPGYEIELRD-EAGHAVPDGEVGDLYIKGPSAAVMYWNNREKSRA 401 (529)
T ss_dssp EEEEEECTTTSSEEEEC-----CTTCCCTTSCCEECTTCEEEEEC-TTSCBCCTTSCEEEEEECTTCCCCBTTCHHHHHH
T ss_pred eeeeEchhhcCceeecc-----ccCCCccCCcccCCCCCEEEEEC-CCCCCCCCCCccEEEEecCCcccccCCChHHHHH
Confidence 99999999997655443 22234668899999999999999 6699999999999999999999999999999887
Q ss_pred eee
Q 014952 410 SIV 412 (415)
Q Consensus 410 ~~~ 412 (415)
+|.
T Consensus 402 ~f~ 404 (529)
T 2v7b_A 402 TFL 404 (529)
T ss_dssp HEE
T ss_pred hhh
Confidence 763
No 10
>1mdb_A 2,3-dihydroxybenzoate-AMP ligase; adenylation domain, peptide synthetase, antibiotic biosynthesis, siderophore formation; HET: AMP DBH; 2.15A {Bacillus subtilis} SCOP: e.23.1.1 PDB: 1md9_A* 1mdf_A
Probab=100.00 E-value=9.6e-59 Score=455.87 Aligned_cols=372 Identities=24% Similarity=0.357 Sum_probs=310.7
Q ss_pred CCCHHhHHHhhhccCCCCcEEEeCCCCCeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHHhCCe
Q 014952 24 HLPLHTYCFENISQFADRPCIINGPTGDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGAT 103 (415)
Q Consensus 24 ~~tl~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~ 103 (415)
..|+.++|.++++++|+++|+++. ++++||+||.++++++|+.|+++|+++||+|+++++|+.++++++|||+++|++
T Consensus 24 ~~tl~~~l~~~a~~~p~~~A~~~~--~~~~Ty~eL~~~~~~lA~~L~~~Gv~~gd~V~i~~~~~~~~~~~~lA~~~~Ga~ 101 (539)
T 1mdb_A 24 GETFGDLLRDRAAKYGDRIAITCG--NTHWSYRELDTRADRLAAGFQKLGIQQKDRVVVQLPNIKEFFEVIFALFRLGAL 101 (539)
T ss_dssp SCCHHHHHHHHHHHHTTSEEEEET--TEEEEHHHHHHHHHHHHHHHHHHTCCTTCEEEECCCSSHHHHHHHHHHHHHTCE
T ss_pred CCCHHHHHHHHHHHCCCCEEEEeC--CCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHHHHHcCeE
Confidence 579999999999999999999997 789999999999999999999999999999999999999999999999999999
Q ss_pred EeecCCCCCHHHHHHHHHhcCceEEEEcccch-----HHHHhhhhh-cCce-EEEeCCCCCCccchhhhhhhcccCCCCc
Q 014952 104 STTANPFYTPPEIAKQAIASKAKIIITQAVYN-----DKVRDLSEH-HGAR-IVTIDPPPENCLHFSELITQADENEIPA 176 (415)
Q Consensus 104 ~v~l~~~~~~~~~~~~l~~~~~~~vl~~~~~~-----~~~~~~~~~-~~~~-~i~~~~~~~~~~~~~~l~~~~~~~~~~~ 176 (415)
++|++|.++.+++.+++++++++++|++++.. ......... ...+ ++..++. . .+.++ ........+.
T Consensus 102 ~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~---~~~~~-~~~~~~~~~~ 176 (539)
T 1mdb_A 102 PVFALPSHRSSEITYFCEFAEAAAYIIPDAYSGFDYRSLARQVQSKLPTLKNIIVAGEA-E---EFLPL-EDLHTEPVKL 176 (539)
T ss_dssp EEECCTTCCHHHHHHHHHHTTCSEEEEESEETTEEHHHHHHHHHHHCTTCCCEEEESCC-T---TSEEG-GGCCCCCCCC
T ss_pred EecCCCCCCHHHHHHHHHhCCCCEEEeccccccccHHHHHHHHHhcCCCccEEEEcCCc-c---chhhh-hhcccccccc
Confidence 99999999999999999999999999987642 222222222 1233 3333321 1 12222 1111111223
Q ss_pred ccCCCCCeEEEecCCCCCCCCceeeechHHHHHHHhhhhcCCCCCccCCCCcEEEEccchHHHHhhHH-HHHHHHHcCcE
Q 014952 177 VKINPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNS-VLLCALRVGAA 255 (415)
Q Consensus 177 ~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~-~~l~~l~~G~~ 255 (415)
....++++++|+|||||||.||||+++|+++.+....... .+.+.+++++++.+|++|.+++.. .++.++..|++
T Consensus 177 ~~~~~~d~a~i~~TSGTTG~PKgV~~th~~~~~~~~~~~~----~~~~~~~d~~l~~~p~~h~~~~~~~~~~~~l~~G~~ 252 (539)
T 1mdb_A 177 PEVKSSDVAFLQLSGGSTGLSKLIPRTHDDYIYSLKRSVE----VCWLDHSTVYLAALPMAHNYPLSSPGVLGVLYAGGR 252 (539)
T ss_dssp CCCCTTSEEEEEECCCSSSSCCEEEEEHHHHHHHHHHHHH----HHTCCTTCEEEECSCTTSHHHHHSSHHHHHHHTTCE
T ss_pred CCCCcCceEEEEeCCCcCCCCcEEEEehHHHHHHHHHHHH----hhCCCCCCEEEEeecccccchhhHHHHHHHHHhCCE
Confidence 4456789999999999999999999999999988877766 456788999999999999999875 58899999999
Q ss_pred EEEcCCCCHHHHHHHHHhcCceeeecchHHHHHHHcCCCCCCCCcccceeeeecCCCCCHHHHHHHHhhCCCCccccccc
Q 014952 256 ILIMQKFDIVKLMELVQKYKVTVAPFVPPIVLAVAKSGDVDKYDMSSIRTVMSGAAPMGKELEDAVRAKLPHAKLGQGYG 335 (415)
Q Consensus 256 ~v~~~~~~~~~~~~~l~~~~~t~l~~~p~~l~~l~~~~~~~~~~l~~lr~v~~gG~~l~~~~~~~~~~~~~~~~~~~~YG 335 (415)
+++.+.+++..+++.++++++|++.++|+++..+++.......++++||.+++||+++++++.+++.+.+ ++++++.||
T Consensus 253 ~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~~~~gG~~l~~~~~~~~~~~~-~~~~~~~YG 331 (539)
T 1mdb_A 253 VVLSPSPSPDDAFPLIEREKVTITALVPPLAMVWMDAASSRRDDLSSLQVLQVGGAKFSAEAARRVKAVF-GCTLQQVFG 331 (539)
T ss_dssp EEECSSSSHHHHHHHHHHHTCSEEEECHHHHHHHHHHHHHCCCCCTTCCEEEEESSCCCHHHHTTHHHHT-CSEEEEEEE
T ss_pred EEECCCCCHHHHHHHHHHcCCeEEEccHHHHHHHHhCccccCCCccceeEEEEcCCCCCHHHHHHHHHHh-CCcEEEEEc
Confidence 9999999999999999999999999999999999876554556789999999999999999999999999 899999999
Q ss_pred cccCCccccccccccCCccccCCCcccccccCC-eEEEEeCCCCCCCCCCCceeEEEecCccccccccCCcceeeeee
Q 014952 336 MTEAGPVLSMCLAFAKEPFEIKSGACGTVVRNA-EMKIVDPDTGISLPRNQAGEICIRGAQIMKGTYHIYAPFLLSIV 412 (415)
Q Consensus 336 ~tE~~~~~~~~~~~~~~~~~~~~~~~G~p~~~~-~v~i~d~~~~~~~~~g~~Gel~v~~~~~~~gY~~~~~~~~~~~~ 412 (415)
+||++.. ... .........+++|+|+++. +++|+| +++++++.|+.|||+|+||++++|||++|+.|..+|.
T Consensus 332 ~TE~~~~-~~~---~~~~~~~~~~~~G~p~~~~~~~~i~d-~~~~~~~~g~~GEl~v~g~~v~~GY~~~~~~t~~~f~ 404 (539)
T 1mdb_A 332 MAEGLVN-YTR---LDDPEEIIVNTQGKPMSPYDESRVWD-DHDRDVKPGETGHLLTRGPYTIRGYYKAEEHNAASFT 404 (539)
T ss_dssp CTTSCEE-ECC---TTSCHHHHHHCCCEESSTTCEEEEEC-TTSCBCCTTCCEEEEEECTTSCSSCTTCHHHHHHHBC
T ss_pred CCCCccc-ccC---CCCcHHhcCCCCCcccCCCceEEEEC-CCCCCCcCCCcceEEeeCcccchhhcCChhhhhhhcc
Confidence 9996532 211 1111223457899999765 899999 5699999999999999999999999999999888774
No 11
>3t5a_A Long-chain-fatty-acid--AMP ligase FADD28; acetyl-COA synthetase like fold, AMP-binding; 2.05A {Mycobacterium tuberculosis} PDB: 3e53_A
Probab=100.00 E-value=4.8e-59 Score=452.72 Aligned_cols=375 Identities=18% Similarity=0.198 Sum_probs=300.8
Q ss_pred CCCCCCCHHhHHHhhhccCCCCcEEEeCC-----CC--CeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHH
Q 014952 20 YIPNHLPLHTYCFENISQFADRPCIINGP-----TG--DVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVF 92 (415)
Q Consensus 20 ~~~~~~tl~~~l~~~a~~~p~~~a~~~~~-----~~--~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~ 92 (415)
....++|+.+.|.++++++|+++|+++.+ ++ +++||+||.++++++|+.|+++|+ +||+|+++++|++++++
T Consensus 19 ~~~~~~tl~~~l~~~a~~~pd~~Al~~~~~~~~~~g~~~~~Ty~el~~~~~~lA~~L~~~g~-~gd~V~i~~~n~~e~~~ 97 (480)
T 3t5a_A 19 SHMSVRSLPAALRACARLQPHDPAFTFMDYEQDWDGVAITLTWSQLYRRTLNVAQELSRCGS-TGDRVVISAPQGLEYVV 97 (480)
T ss_dssp -----CCHHHHHHHHHHHSTTSEEEEEEETTTCTTCEEEEEEHHHHHHHHHHHHHHHTTSSC-TTCEEEEECCSSHHHHH
T ss_pred CCCCcccHHHHHHHHHHhCCCCceEEEecccCCCCCceEEEcHHHHHHHHHHHHHHHHhcCC-CCCEEEEEcCCcHHHHH
Confidence 33346899999999999999999999753 12 789999999999999999999996 99999999999999999
Q ss_pred HHHHHHHhCCeEeecCC---CCCHHHHHHHHHhcCceEEEEcccchHHHHhhhhhcC----ceEEEeCCCCCCccchhhh
Q 014952 93 AFLGASYIGATSTTANP---FYTPPEIAKQAIASKAKIIITQAVYNDKVRDLSEHHG----ARIVTIDPPPENCLHFSEL 165 (415)
Q Consensus 93 ~~lA~~~~G~~~v~l~~---~~~~~~~~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~----~~~i~~~~~~~~~~~~~~l 165 (415)
++|||+++|++++|+++ .++.+++.+++++++++++|++.+..+.+........ ..++.++. +
T Consensus 98 ~~lA~~~~G~v~vpl~~~~~~~~~~~l~~il~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~ 167 (480)
T 3t5a_A 98 AFLGALQAGRIAVPLSVPQGGVTDERSDSVLSDSSPVAILTTSSAVDDVVQHVARRPGESPPSIIEVDL----------L 167 (480)
T ss_dssp HHHHHHHTTCEEEEECSCCSCTTCCHHHHHHHHHCCSEEEECTTTHHHHHHTCC------CCEEEEGGG----------S
T ss_pred HHHHHHHhCcEEEeeCCCCccchHHHHHHHHHhCCCCEEEeChhHHHHHHHHHhccccccccceeEecc----------c
Confidence 99999999999999999 7788999999999999999999988776665432211 13333321 1
Q ss_pred hhhcccCCCCcccCCCCCeEEEecCCCCCCCCceeeechHHHHHHHhhhhcCCCCCccCCC------CcEEEEccchHHH
Q 014952 166 ITQADENEIPAVKINPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHK------EDVILCVLPLFHI 239 (415)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~------~~~~~~~~pl~~~ 239 (415)
........+.....++++++|+|||||||.||+|+++|+++.+.+..... .+.... ++++++.+|++|.
T Consensus 168 -~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~----~~~~~~~~~~~~~d~~l~~~pl~h~ 242 (480)
T 3t5a_A 168 -DLDAPNGYTFKEDEYPSTAYLQYTSGSTRTPAGVVMSHQNVRVNFEQLMS----GYFADTDGIPPPNSALVSWLPFYHD 242 (480)
T ss_dssp -CTTCC---CCCCSSCCSEEEEECC------CCCEEEEHHHHHHHHHHHHH----HHCTTTTTCCCTTEEEEECCCTTST
T ss_pred -ccccccCCCCCCCCCCceEEEEecCCCCCCCcEEEEeHHHHHHHHHHHHH----HhccccccCCCCCCeEEEeCCCcCc
Confidence 11111122344567789999999999999999999999999988777665 233444 8999999999999
Q ss_pred HhhHHHHHHHHHcCcEEEEcCCC----CHHHHHHHHHhcCceeeecchHHHHHHHcC----CCCCCCCcccceeeeecCC
Q 014952 240 YSLNSVLLCALRVGAAILIMQKF----DIVKLMELVQKYKVTVAPFVPPIVLAVAKS----GDVDKYDMSSIRTVMSGAA 311 (415)
Q Consensus 240 ~g~~~~~l~~l~~G~~~v~~~~~----~~~~~~~~l~~~~~t~l~~~p~~l~~l~~~----~~~~~~~l~~lr~v~~gG~ 311 (415)
+++...++.++..|+++++.++. ++..+++.++++++| +.++|+++..++.. ......++++||.+++||+
T Consensus 243 ~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~~~i~~~~~t-~~~~p~~~~~l~~~~~~~~~~~~~~l~~lr~i~~gG~ 321 (480)
T 3t5a_A 243 MGLVIGICAPILGGYPAVLTSPVSFLQRPARWMHLMASDFHA-FSAAPNFAFELAARRTTDDDMAGRDLGNILTILSGSE 321 (480)
T ss_dssp THHHHHTHHHHHHTCCEEECCHHHHHHCTHHHHHHTTSSSEE-EEEECHHHHHHHHHHCCTGGGTTCCCTTCCEEEECCT
T ss_pred cHHHHHHHHHHHcCCceEEECHHHHHHCHHHHHHHHHhhcee-EeeChHHHHHHHHhhcCcccccccchhhhheeeecCC
Confidence 99876789999999999998753 899999999999999 78899988887753 3344567899999999999
Q ss_pred CCCHHHHHHHHhhC-----CCCccccccccccCCccccccccccCC--------------------ccccCCCccccccc
Q 014952 312 PMGKELEDAVRAKL-----PHAKLGQGYGMTEAGPVLSMCLAFAKE--------------------PFEIKSGACGTVVR 366 (415)
Q Consensus 312 ~l~~~~~~~~~~~~-----~~~~~~~~YG~tE~~~~~~~~~~~~~~--------------------~~~~~~~~~G~p~~ 366 (415)
++++++.+++.+.| ++..+++.||+||++.+++........ .......++|+|++
T Consensus 322 ~l~~~~~~~~~~~~~~~~~~~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~G~p~~ 401 (480)
T 3t5a_A 322 RVQAATIKRFADRFARFNLQERVIRPSYWLAEATVYVATSKPGQPPETVDFDTESLSAGHAKPCAGGGATSLISYMLPRS 401 (480)
T ss_dssp TCCHHHHHHHHHHSGGGTCCGGGEEEEEEETTTTEEEEECCTTSSCCEEEECHHHHHTTBCCCCCSSSCEEEECEECCSS
T ss_pred cCCHHHHHHHHHHHhhcCCChhhccccccccccceeEeecccCCCcceEEecHHHhccCceeecCCCCcceeeecCcccC
Confidence 99999999999998 345799999999999766654211100 00234468999999
Q ss_pred CCeEEEEeCCCCCCCCCCCceeEEEecCccccccccCCcceeeeee
Q 014952 367 NAEMKIVDPDTGISLPRNQAGEICIRGAQIMKGTYHIYAPFLLSIV 412 (415)
Q Consensus 367 ~~~v~i~d~~~~~~~~~g~~Gel~v~~~~~~~gY~~~~~~~~~~~~ 412 (415)
++++|+|++++++|+.|+.|||+|+||++++|||++|++|.++|.
T Consensus 402 -~~~~ivd~~~g~~~~~g~~GEl~v~g~~v~~GY~~~pe~t~~~f~ 446 (480)
T 3t5a_A 402 -PIVRIVDSDTCIECPDGTVGEIWVHGDNVANGYWQKPDESERTFG 446 (480)
T ss_dssp -SEEEEEETTTTEECCTTBCEEEEEESTTSCCCBTTBHHHHHHHHC
T ss_pred -CEEEEEcCCCCcCCCCCCEEEEEEeCCccccccccCcchhHHHHh
Confidence 999999988899999999999999999999999999999998884
No 12
>3e7w_A D-alanine--poly(phosphoribitol) ligase subunit 1; DLTA, non-ribosomal peptide synthetase, NRPS, adenylation domain, D-alanylation; HET: AMP; 2.28A {Bacillus subtilis} PDB: 3e7x_A*
Probab=100.00 E-value=4.2e-58 Score=448.84 Aligned_cols=366 Identities=19% Similarity=0.217 Sum_probs=313.5
Q ss_pred CCHHhHHHhhhccCCCCcEEEeCCCCCeeeHHHHHHHHHHHHHHHHHc-CCCCCCEEEEEcCCchhHHHHHHHHHHhCCe
Q 014952 25 LPLHTYCFENISQFADRPCIINGPTGDVYTYADVELTSRKVAAGLSKL-GVQKGDVIMLLLQNCPQFVFAFLGASYIGAT 103 (415)
Q Consensus 25 ~tl~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~~a~~L~~~-g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~ 103 (415)
||+.+.|.++++++|+++|+++. ++++||+||.++++++|+.|+++ |.++|++|+++++|++++++++|||+++|++
T Consensus 1 m~l~~~l~~~a~~~p~~~Al~~~--~~~~Ty~eL~~~~~~~A~~L~~~~~~~~g~~V~i~~~n~~~~~~~~lA~~~~G~~ 78 (511)
T 3e7w_A 1 MKLLHAIQTHAETYPQTDAFRSQ--GQSLTYQELWEQSDRAAAAIQKRISGEKKSPILVYGHMEPHMIVSFLGSVKAGHP 78 (511)
T ss_dssp CCHHHHHHHHHHHSTTSEEEEET--TEEEEHHHHHHHHHHHHHHHTTTSCSSSCCCEEEEESSCHHHHHHHHHHHHHTCC
T ss_pred CcHHHHHHHHHHHCCCCeEEEcC--CceeeHHHHHHHHHHHHHHHHHhcCCCCCCeEEEEecCCHHHHHHHHHHHHhCCE
Confidence 68999999999999999999997 89999999999999999999985 8889999999999999999999999999999
Q ss_pred EeecCCCCCHHHHHHHHHhcCceEEEEcccchHHHHhhhhhcCceEEEeCCCCCCccchhhhhhhcccCCCCcccCCCCC
Q 014952 104 STTANPFYTPPEIAKQAIASKAKIIITQAVYNDKVRDLSEHHGARIVTIDPPPENCLHFSELITQADENEIPAVKINPDD 183 (415)
Q Consensus 104 ~v~l~~~~~~~~~~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 183 (415)
++|+++.++.+++.+++++++++++|++....... . .... ....++++...............+++
T Consensus 79 ~vpl~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~--~--~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (511)
T 3e7w_A 79 YIPVDLSIPSERIAKIIESSGAELLIHAAGLSIDA--V--GQQI----------QTVSAEELLENEGGSVSQDQWVKEHE 144 (511)
T ss_dssp EEEEETTSCHHHHHHHHHHHTCCEEEESSSCCTTC--C--CCSS----------CEEEHHHHHTSCSCCCCGGGSCCTTS
T ss_pred EEecCCCChHHHHHHHHHhCCCCEEEecccccchh--c--cccc----------ceecHhhhhccccCCccccccCCCCC
Confidence 99999999999999999999999999965432100 0 0001 12233444222222222334467789
Q ss_pred eEEEecCCCCCCCCceeeechHHHHHHHhhhhcCCCCCccCCCCcEEEEccchHHHHhhHHHHHHHHHcCcEEEEcCC--
Q 014952 184 VVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIMQK-- 261 (415)
Q Consensus 184 ~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~l~~l~~G~~~v~~~~-- 261 (415)
+++|+|||||||.||+|+++|+++.+...+... .+.+.+++++++.+|++|..++. .++.++..|+++++.+.
T Consensus 145 ~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~----~~~~~~~d~~l~~~p~~~~~~~~-~~~~~l~~G~~~~~~~~~~ 219 (511)
T 3e7w_A 145 TFYIIYTSGSTGNPKGVQISAANLQSFTDWICA----DFPVSGGKIFLNQAPFSFDLSVM-DLYPCLQSGGTLHCVTKDA 219 (511)
T ss_dssp EEEEEEECCTTSSCEEEEEEHHHHHHHHHHHHH----HSTTTTTCEEEECSCTTSTHHHH-HHHHHHHTTCEEEECCHHH
T ss_pred eEEEEECCCCCCCCCEEEEcHHHHHHHHHHHHH----hcCCCccceEEEeCCccHHHHHH-HHHHHHhcCCEEEEcChhh
Confidence 999999999999999999999999998888776 45678999999999999999987 58899999999999875
Q ss_pred -CCHHHHHHHHHhcCceeeecchHHHHHHHcCCCCCCCCcccceeeeecCCCCCHHHHHHHHhhCCCCccccccccccCC
Q 014952 262 -FDIVKLMELVQKYKVTVAPFVPPIVLAVAKSGDVDKYDMSSIRTVMSGAAPMGKELEDAVRAKLPHAKLGQGYGMTEAG 340 (415)
Q Consensus 262 -~~~~~~~~~l~~~~~t~l~~~p~~l~~l~~~~~~~~~~l~~lr~v~~gG~~l~~~~~~~~~~~~~~~~~~~~YG~tE~~ 340 (415)
+++..+++.++++++|++.++|+++..+++.+......++++|.+++||++++.++.+++.+.||++++++.||+||++
T Consensus 220 ~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~l~~~~~~G~~l~~~~~~~~~~~~~~~~i~~~YG~TE~~ 299 (511)
T 3e7w_A 220 VNKPKVLFEELKKSGLNVWTSTPSFVQMCLMDPGFSQDLLPHADTFMFCGEVLPVSVAKALLERFPKAKIFNTYGPTEAT 299 (511)
T ss_dssp HHSHHHHHHHHHHHCCSEEEECHHHHHHHHTSTTCSTTTCTTCCEEEECSSCCCHHHHHHHHHHCTTCEEEECCCCGGGS
T ss_pred hcCHHHHHHHHHHcCCcEEEecHHHHHHHHhccccccccCCcccEEEEecCCCCHHHHHHHHHHCCCcEEEeCcccchhe
Confidence 6899999999999999999999999999988877777889999999999999999999999999999999999999999
Q ss_pred ccccccccccCCccccCCCcccccccCCeEEEEeCCCCCCCCCCCceeEEEecCccccccccCCcceeeeee
Q 014952 341 PVLSMCLAFAKEPFEIKSGACGTVVRNAEMKIVDPDTGISLPRNQAGEICIRGAQIMKGTYHIYAPFLLSIV 412 (415)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~G~p~~~~~v~i~d~~~~~~~~~g~~Gel~v~~~~~~~gY~~~~~~~~~~~~ 412 (415)
+.++.+....+........++|+|+|+++++|+| ++|++++.|+.|||+|+||+++.|||++|+.+..+|+
T Consensus 300 ~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d-~~g~~~~~g~~GEl~v~g~~v~~GY~~~~~~t~~~f~ 370 (511)
T 3e7w_A 300 VAVTSVEITNDVISRSESLPVGFAKPDMNIFIMD-EEGQPLPEGEKGEIVIAGPSVSRGYLGEPELTEKAFF 370 (511)
T ss_dssp SCSEEEEECHHHHTTCSSCCCBEECTTCEEEEEC-TTSCBCCTTCCEEEEEESTTSCCCBTTCHHHHHHHEE
T ss_pred eeeeEEeccccccccCCcCCCcceeCCCEEEEEC-CCCCCCCCCCceEEEEecCccChhhCCCcccchhhhc
Confidence 7665442111111233556799999999999999 5599999999999999999999999999999998885
No 13
>3c5e_A Acyl-coenzyme A synthetase ACSM2A, mitochondrial; middle-chain acyl-COA synthetase, xenobiotic/medium-chain FA COA ligase; HET: ATP; 1.60A {Homo sapiens} PDB: 2vze_A 3b7w_A* 3day_A* 3eq6_A* 3eyn_A* 3gpc_A* 2wd9_A*
Probab=100.00 E-value=5.2e-57 Score=445.78 Aligned_cols=382 Identities=19% Similarity=0.269 Sum_probs=317.8
Q ss_pred CCCCCCCCCCCH-HhHHHhhhcc-----CCCCcEEEeCC---CCCeeeHHHHHHHHHHHHHHHHHc-CCCCCCEEEEEcC
Q 014952 16 LPDIYIPNHLPL-HTYCFENISQ-----FADRPCIINGP---TGDVYTYADVELTSRKVAAGLSKL-GVQKGDVIMLLLQ 85 (415)
Q Consensus 16 ~~~~~~~~~~tl-~~~l~~~a~~-----~p~~~a~~~~~---~~~~~Ty~el~~~~~~~a~~L~~~-g~~~g~~V~i~~~ 85 (415)
...|..|...++ .++|.+++++ +|+++|+++.+ .++++||+||.++++++|+.|+++ |+++||+|+++++
T Consensus 28 ~~~~~~~~~~~~~~~~l~~~a~~~~a~~~p~~~al~~~~~~g~~~~~Ty~el~~~~~~lA~~L~~~~Gv~~gd~V~i~~~ 107 (570)
T 3c5e_A 28 WGHQEVPAKFNFASDVLDHWADMEKAGKRPPSPALWWVNGKGKELMWNFRELSENSQQAANVLSGACGLQRGDRVAVVLP 107 (570)
T ss_dssp CCBCCCCSBCCHHHHTHHHHHHHHHTTSSCCCEEEEEECSSSCEEEEEHHHHHHHHHHHHHHHHTTTCCCTTCEEEEECC
T ss_pred cccccCCccccHHHHHHHHHHhhccccCCCCceEEEEEcCCCceeEEeHHHHHHHHHHHHHHHHHccCCCCCCEEEEEcC
Confidence 455666666665 6888888888 99999999742 137899999999999999999998 9999999999999
Q ss_pred CchhHHHHHHHHHHhCCeEeecCCCCCHHHHHHHHHhcCceEEEEcccchHHHHhhhhhcC-c-eEEEeCC-CCCCccch
Q 014952 86 NCPQFVFAFLGASYIGATSTTANPFYTPPEIAKQAIASKAKIIITQAVYNDKVRDLSEHHG-A-RIVTIDP-PPENCLHF 162 (415)
Q Consensus 86 ~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~-~-~~i~~~~-~~~~~~~~ 162 (415)
|++++++++|||+++|++++|+++.++.+++.+++++++++++|++.+..+.+.......+ . .++.++. .......+
T Consensus 108 n~~e~~~~~lA~~~~Ga~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (570)
T 3c5e_A 108 RVPEWWLVILGCIRAGLIFMPGTIQMKSTDILYRLQMSKAKAIVAGDEVIQEVDTVASECPSLRIKLLVSEKSCDGWLNF 187 (570)
T ss_dssp SCHHHHHHHHHHHHHTCEEEECCTTCCHHHHHHHHHHHTCSEEEEETTTHHHHHHHGGGCTTCCEEEEESSSCCTTSEEH
T ss_pred CCHHHHHHHHHHHHcCeEEEecCCCCCHHHHHHHHHhcCCeEEEechHHHHHHHHHhhcCCceeEEEEecccCccccccH
Confidence 9999999999999999999999999999999999999999999999888777665443322 2 3455543 22334456
Q ss_pred hhhhhhcccCCCCcccCCCCCeEEEecCCCCCCCCceeeechHHHHH--HHhhhhcCCCCCccCCCCcEEEEccchHHHH
Q 014952 163 SELITQADENEIPAVKINPDDVVALPYSSGTTGLPKGVMLTHKGLVT--SVAQQVDGENPNLYLHKEDVILCVLPLFHIY 240 (415)
Q Consensus 163 ~~l~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~--~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~ 240 (415)
++++... ....+.....++++++|+|||||||.||+|+++|+ ++. ..... . .+.+.+++++++..|++|..
T Consensus 188 ~~~~~~~-~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~-~~~~~~~~~~-~----~~~~~~~d~~~~~~p~~~~~ 260 (570)
T 3c5e_A 188 KKLLNEA-STTHHCVETGSQEASAIYFTSGTSGLPKMAEHSYS-SLGLKAKMDA-G----WTGLQASDIMWTISDTGWIL 260 (570)
T ss_dssp HHHHHHS-CSCCCCCCCBTTSEEEEEECCCSSSSCCEEEEEHH-HHHHHHHHHT-T----TTSCCTTCEEEECCCTTSHH
T ss_pred HHHhhcc-cccccccCCCCCCcEEEEECCCCCCCCCEEEechH-HHHhhhhhhh-h----hcCCCCCceEEEcCchHHHH
Confidence 6653322 22223345667999999999999999999999999 444 33332 3 45678999999999999999
Q ss_pred hhHHHHHHHHHcCcEEEEcC--CCCHHHHHHHHHhcCceeeecchHHHHHHHcCCCCCCCCcccceeeeecCCCCCHHHH
Q 014952 241 SLNSVLLCALRVGAAILIMQ--KFDIVKLMELVQKYKVTVAPFVPPIVLAVAKSGDVDKYDMSSIRTVMSGAAPMGKELE 318 (415)
Q Consensus 241 g~~~~~l~~l~~G~~~v~~~--~~~~~~~~~~l~~~~~t~l~~~p~~l~~l~~~~~~~~~~l~~lr~v~~gG~~l~~~~~ 318 (415)
++...++.++..|+++++.+ .+++..+++.++++++|+++++|.++..|.+.. ....++++||.+++||+++++++.
T Consensus 261 ~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~-~~~~~~~~lr~i~~gGe~l~~~~~ 339 (570)
T 3c5e_A 261 NILCSLMEPWALGACTFVHLLPKFDPLVILKTLSSYPIKSMMGAPIVYRMLLQQD-LSSYKFPHLQNCVTVGESLLPETL 339 (570)
T ss_dssp HHHHTTHHHHHHTCEEEEECCSSCCHHHHHHHHHHSCCCEEEECHHHHHHHHTSC-TTTCCCTTCCEEEEESSCCCHHHH
T ss_pred HHHHHHHHHHHhCceEEEecCCCCCHHHHHHHHHHhCCeEEeccHHHHHHHHhcc-ccccccccceEEEEcCCcCCHHHH
Confidence 98766788999999999986 689999999999999999999999999998763 344568999999999999999999
Q ss_pred HHHHhhCCCCccccccccccCCccccccccccCCccccCCCcccccccCCeEEEEeCCCCCCCCCCCceeEEEe-----c
Q 014952 319 DAVRAKLPHAKLGQGYGMTEAGPVLSMCLAFAKEPFEIKSGACGTVVRNAEMKIVDPDTGISLPRNQAGEICIR-----G 393 (415)
Q Consensus 319 ~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~G~p~~~~~v~i~d~~~~~~~~~g~~Gel~v~-----~ 393 (415)
+++.+.+ ++++++.||+||++.+++.. .......+++|+|+|+++++|+| +++++++.|+.|||+|+ |
T Consensus 340 ~~~~~~~-g~~i~~~YG~TE~~~~~~~~-----~~~~~~~~~vG~p~~~~~v~i~d-~~g~~~~~G~~GEl~v~~~~~~g 412 (570)
T 3c5e_A 340 ENWRAQT-GLDIRESYGQTETGLTCMVS-----KTMKIKPGYMGTAASCYDVQIID-DKGNVLPPGTEGDIGIRVKPIRP 412 (570)
T ss_dssp HHHHHHH-SCCCEEEEEETTTEEEEECC-----TTSCCCTTCCCEECTTCCEEEEC-TTSCBCCTTCCEEEEEECSSBCC
T ss_pred HHHHHHh-CCchhhccchhhcccceecC-----cccccCCCcccccCCCceEEEEC-CCCCCCCCCCCCeeEEeccCCCC
Confidence 9999988 89999999999998654332 12234668999999999999999 55999999999999999 9
Q ss_pred CccccccccCCcceeeeee
Q 014952 394 AQIMKGTYHIYAPFLLSIV 412 (415)
Q Consensus 394 ~~~~~gY~~~~~~~~~~~~ 412 (415)
|+++.|||++|+++...|.
T Consensus 413 ~~v~~GY~~~~~~t~~~f~ 431 (570)
T 3c5e_A 413 IGIFSGYVDNPDKTAANIR 431 (570)
T ss_dssp TTCCCEETTCHHHHHHTEE
T ss_pred chhhccccCChhHhhhhhc
Confidence 9999999999999887763
No 14
>3fce_A D-alanine--poly(phosphoribitol) ligase subunit 1; DLTA, AMP-forming domain, adenylation, D-alanine protein ligase, ATP complex; HET: ATP; 1.90A {Bacillus cereus} PDB: 3fcc_A* 3dhv_A*
Probab=100.00 E-value=4.7e-58 Score=448.71 Aligned_cols=367 Identities=19% Similarity=0.231 Sum_probs=310.4
Q ss_pred CCHHhHHHhhhccCCCCcEEEeCCCCCeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHHhCCeE
Q 014952 25 LPLHTYCFENISQFADRPCIINGPTGDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGATS 104 (415)
Q Consensus 25 ~tl~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~ 104 (415)
||+.+.|.++++++|+++|+++. ++++||+||.++++++|++|+++|+++||+|+++++|++++++++|||+++|+++
T Consensus 1 m~l~~~l~~~a~~~p~~~A~~~~--~~~~Ty~el~~~~~~lA~~L~~~g~~~gd~V~i~~~n~~e~~~~~la~~~~G~v~ 78 (512)
T 3fce_A 1 MKLLEQIEKWAAETPDQTAFVWR--DAKITYKQLKEDSDALAHWISSEYPDDRSPIMVYGHMQPEMIINFLGCVKAGHAY 78 (512)
T ss_dssp CCHHHHHHHHHHHSTTSEEEEET--TEEEEHHHHHHHHHHHHHHHHHHSTTCCCCEEEEESSCHHHHHHHHHHHHTTCCE
T ss_pred CcHHHHHHHHHHHCCCceEEEeC--CceEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEeCCCHHHHHHHHHHHHhCCEE
Confidence 68999999999999999999997 7899999999999999999999999999999999999999999999999999999
Q ss_pred eecCCCCCHHHHHHHHHhcCceEEEEcccchHHHHhhhhhcCceEEEeCCCCCCccchhhhhhhc-ccCCCCcccCCCCC
Q 014952 105 TTANPFYTPPEIAKQAIASKAKIIITQAVYNDKVRDLSEHHGARIVTIDPPPENCLHFSELITQA-DENEIPAVKINPDD 183 (415)
Q Consensus 105 v~l~~~~~~~~~~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~ 183 (415)
+|+++.++.+++.++++++++++++++...... .....++..+ .+.++.... .....+.....+++
T Consensus 79 vpl~~~~~~~~l~~il~~~~~~~~i~~~~~~~~------~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~d 145 (512)
T 3fce_A 79 IPVDLSIPADRVQRIAENSGAKLLLSATAVTVT------DLPVRIVSED-------NLKDIFFTHKGNTPNPEHAVKGDE 145 (512)
T ss_dssp EEEETTSCHHHHHHHHHHSCCCEEEESSCCCSS------CCSSEEEETH-------HHHHHHHHTTTCCCCGGGSCCTTS
T ss_pred EeeCCCCcHHHHHHHHHhcCCCEEEecCccccc------ccccceechh-------hhhhhcccccccCCCccccCCCCC
Confidence 999999999999999999999999997543210 0112222111 122221111 11122334567899
Q ss_pred eEEEecCCCCCCCCceeeechHHHHHHHhhhhcCCCCCccCCCCcEEEEccchHHHHhhHHHHHHHHHcCcEEEEcCC--
Q 014952 184 VVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIMQK-- 261 (415)
Q Consensus 184 ~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~l~~l~~G~~~v~~~~-- 261 (415)
+++|+|||||||.||+|+++|+++.+...+... .+.+.+++++++.+|++|..++. .++.++..|+++++.+.
T Consensus 146 ~a~i~~TSGTTG~PKgv~~th~~l~~~~~~~~~----~~~~~~~d~~l~~~p~~~~~~~~-~~~~~l~~G~~~~~~~~~~ 220 (512)
T 3fce_A 146 NFYIIYTSGSTGNPKGVQITYNCLVSFTKWAVE----DFNLQTGQVFLNQAPFSFDLSVM-DIYPSLVTGGTLWAIDKDM 220 (512)
T ss_dssp EEEEEEECC----CEEEEEEHHHHHHHHHHHHH----HTTCCSSCEEEECSCTTSGGGHH-HHHHHHHTTCEEEECCHHH
T ss_pred eEEEEECCCCCCCCceEEEehHHHHHHHHHHHH----hcCCCCCCEEEEeCCccHhHHHH-HHHHHHhCCCEEEECCHHH
Confidence 999999999999999999999999998887776 45688999999999999999987 58899999999999886
Q ss_pred -CCHHHHHHHHHhcCceeeecchHHHHHHHcCCCCCCCCcccceeeeecCCCCCHHHHHHHHhhCCCCccccccccccCC
Q 014952 262 -FDIVKLMELVQKYKVTVAPFVPPIVLAVAKSGDVDKYDMSSIRTVMSGAAPMGKELEDAVRAKLPHAKLGQGYGMTEAG 340 (415)
Q Consensus 262 -~~~~~~~~~l~~~~~t~l~~~p~~l~~l~~~~~~~~~~l~~lr~v~~gG~~l~~~~~~~~~~~~~~~~~~~~YG~tE~~ 340 (415)
+++..+++.++++++|++.++|+++..+++.......+++++|.+++||+++++++.+++.+.|+++++++.||+||++
T Consensus 221 ~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~~~~~G~~l~~~~~~~~~~~~~~~~i~~~YG~TE~~ 300 (512)
T 3fce_A 221 IARPKDLFASLEQSDIQVWTSTPSFAEMCLMEASFSESMLPNMKTFLFCGEVLPNEVARKLIERFPKATIMNTYGPTEAT 300 (512)
T ss_dssp HHSHHHHHHHHHHHCCCEEEECHHHHHHHTTSTTCSTTTSTTCCEEEECSSCCCHHHHHHHHHHCTTCEEEEEECCGGGS
T ss_pred hhCHHHHHHHHHHcCCcEEEecHHHHHHHHhhccccchhCccccEEEEecCcCCHHHHHHHHHHCCCCEEEeCcccChhh
Confidence 6899999999999999999999999999988777778899999999999999999999999999999999999999999
Q ss_pred ccccccccccCCccccCCCcccccccCCeEEEEeCCCCCCCCCCCceeEEEecCccccccccCCcceeeeee
Q 014952 341 PVLSMCLAFAKEPFEIKSGACGTVVRNAEMKIVDPDTGISLPRNQAGEICIRGAQIMKGTYHIYAPFLLSIV 412 (415)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~G~p~~~~~v~i~d~~~~~~~~~g~~Gel~v~~~~~~~gY~~~~~~~~~~~~ 412 (415)
+.++...............++|+|+++++++|+| ++|++++.|+.|||+|+||+++.|||++|+.+..+|.
T Consensus 301 ~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d-~~g~~~~~g~~GEl~v~g~~v~~GY~~~~~~t~~~f~ 371 (512)
T 3fce_A 301 VAVTGIHVTEEVLDQYKSLPVGYCKSDCRLLIMK-EDGTIAPDGEKGEIVIVGPSVSVGYLGSPELTEKAFT 371 (512)
T ss_dssp SCSEEEECCHHHHHHCSSCCCEEECTTCEEEEEC-SSSCBCCTTSCEEEEEESTTSCSCBTTCHHHHHHHEE
T ss_pred hheeeEEeccccccccCCCccccccCCcEEEEEC-CCCCCCCCCCeEEEEEeccccChhhcCCchhhhhccc
Confidence 7665432111111234567899999999999999 6699999999999999999999999999999988874
No 15
>3r44_A Fatty acyl COA synthetase FADD13 (fatty-acyl-COA synthetase); ligase; HET: HIS; 1.80A {Mycobacterium tuberculosis} PDB: 3t5c_A 3t5b_A
Probab=100.00 E-value=3.4e-58 Score=449.70 Aligned_cols=374 Identities=24% Similarity=0.347 Sum_probs=314.6
Q ss_pred CCCCCCHHhHHHhhhccCCCCcEEEeCCCCCeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHHh
Q 014952 21 IPNHLPLHTYCFENISQFADRPCIINGPTGDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYI 100 (415)
Q Consensus 21 ~~~~~tl~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~ 100 (415)
.+.+.|+.++|.++++++|+++|+++.+.+.++||+||.++++++|+.|+++|+++||+|+++++|++++++++|||+++
T Consensus 12 ~~~~~~l~~~l~~~a~~~p~~~A~~~~~~~~~~Ty~eL~~~~~~lA~~L~~~Gv~~gd~V~i~~~~~~~~~~~~lA~~~~ 91 (517)
T 3r44_A 12 DDKMKNIGWMLRQRATVSPRLQAYVEPSTDVRMTYAQMNALANRCADVLTALGIAKGDRVALLMPNSVEFCCLFYGAAKL 91 (517)
T ss_dssp CGGGGCHHHHHHHHHHHSTTSEEEEEGGGTEEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECCSSHHHHHHHHHHHHH
T ss_pred cccccCHHHHHHHHHHhCCCCeEEEeCCcCceeeHHHHHHHHHHHHHHHHHcCCCCcCEEEEEcCCCHHHHHHHHHHHHh
Confidence 34579999999999999999999999744459999999999999999999999999999999999999999999999999
Q ss_pred CCeEeecCCCCCHHHHHHHHHhcCceEEEEcccchHHHHhhhhhcCc--eEEEeCCCCCCccchhhhhhhcccCCCCccc
Q 014952 101 GATSTTANPFYTPPEIAKQAIASKAKIIITQAVYNDKVRDLSEHHGA--RIVTIDPPPENCLHFSELITQADENEIPAVK 178 (415)
Q Consensus 101 G~~~v~l~~~~~~~~~~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~--~~i~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 178 (415)
|++++|+++.++.+++.+++++++++++|++....+.+......... .++.... ...+.+. ........+...
T Consensus 92 G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~-~~~~~~~~~~~~ 166 (517)
T 3r44_A 92 GAVAVPINTRLAAPEVSFILSDSGSKVVIYGAPSAPVIDAIRAQADPPGTVTDWIG----ADSLAER-LRSAAADEPAVE 166 (517)
T ss_dssp TCEEEECCTTSCHHHHHHHHHHHTCSEEEECGGGHHHHHHHHHSSSCCTTCCEEEE----HHHHHHH-HHHCCCCCCCCC
T ss_pred CcEEEecCcccCHHHHHHHHHhcCceEEEECCchHHHHHHHHhccCCccEEEEccC----cccHHHH-hhccCcCCCCCC
Confidence 99999999999999999999999999999998887776655432221 1111110 1123333 222222334456
Q ss_pred CCCCCeEEEecCCCCCCCCceeeechHHHHHHHhhhhcCCCCCccCCCCcEEEEccchHHHHhhHHHHHHHHHcCcEEEE
Q 014952 179 INPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILI 258 (415)
Q Consensus 179 ~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~l~~l~~G~~~v~ 258 (415)
..++++++|+|||||||.||+|+++|+++.+....... .+.+.++++++..+|++|..++...++ ++..|+++++
T Consensus 167 ~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~----~~~~~~~d~~l~~~p~~~~~~~~~~~~-~~~~G~~~v~ 241 (517)
T 3r44_A 167 CGGDDNLFIMYTSGTTGHPKGVVHTHESVHSAASSWAS----TIDVRYRDRLLLPLPMFHVAALTTVIF-SAMRGVTLIS 241 (517)
T ss_dssp CCTTSEEEEEEECC---CCEEEEEEHHHHHHHHHHHHH----HSCCCTTCEEEECSCTTSHHHHHHHHH-HHHHTCEEEE
T ss_pred CCCCCeEEEEECCcccccCceeeeeHHHHHHHHHHHHH----hcCCCCCCEEEEeCchHHHHHHHHHHH-HHhcCeEEEE
Confidence 67899999999999999999999999999998888776 456889999999999999999985444 4459999999
Q ss_pred cCCCCHHHHHHHHHhcCceeeecchHHHHHHHcCCCCCCCCcccceeeeecCCCCCHHHHHHHHhhCCCCcccccccccc
Q 014952 259 MQKFDIVKLMELVQKYKVTVAPFVPPIVLAVAKSGDVDKYDMSSIRTVMSGAAPMGKELEDAVRAKLPHAKLGQGYGMTE 338 (415)
Q Consensus 259 ~~~~~~~~~~~~l~~~~~t~l~~~p~~l~~l~~~~~~~~~~l~~lr~v~~gG~~l~~~~~~~~~~~~~~~~~~~~YG~tE 338 (415)
.+.+++..+++.++++++|++.++|+++..|.+.+.....++++||.+++||+++++++.+++.+. ++++++.||+||
T Consensus 242 ~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~i~~gGe~l~~~~~~~~~~~--~~~~~~~YG~TE 319 (517)
T 3r44_A 242 MPQFDATKVWSLIVEERVCIGGAVPAILNFMRQVPEFAELDAPDFRYFITGGAPMPEALIKIYAAK--NIEVVQGYALTE 319 (517)
T ss_dssp CSSCCHHHHHHHHHHTTCCEEEECHHHHHHHHHSHHHHHCCCTTCCEEEECSSCCCHHHHHHHHHT--TCEEEEEEECGG
T ss_pred eCCCCHHHHHHHHHHhCCeEEEeHHHHHHHHHhCcccccCCCCcccEEEECCCCCCHHHHHHHHhc--CCcEEEeecccc
Confidence 999999999999999999999999999999988765556678999999999999999999999987 899999999999
Q ss_pred CCccccccccccCCccccCCCcccccccCCeEEEEeCCCCCCCCCCCceeEEEecCccccccccCCcceeeee
Q 014952 339 AGPVLSMCLAFAKEPFEIKSGACGTVVRNAEMKIVDPDTGISLPRNQAGEICIRGAQIMKGTYHIYAPFLLSI 411 (415)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~G~p~~~~~v~i~d~~~~~~~~~g~~Gel~v~~~~~~~gY~~~~~~~~~~~ 411 (415)
+++..+... ........+++|+|+++++++|+| +++.+++.| .|||+|+||+++.|||++|+.+..+|
T Consensus 320 ~~~~~~~~~---~~~~~~~~~~~G~~~~~~~~~i~d-~~~~~~~~g-~GEl~v~g~~v~~GY~~~p~~t~~~f 387 (517)
T 3r44_A 320 SCGGGTLLL---SEDALRKAGSAGRATMFTDVAVRG-DDGVIREHG-EGEVVIKSDILLKEYWNRPEATRDAF 387 (517)
T ss_dssp GTTCEEEEC---GGGTTTTTTCCBEECTTEEEEEEC-TTSCEESSE-EEEEEEEETTSCSEETTCHHHHHHTE
T ss_pred cccceeecC---CccccccCCCCCcCCCCeEEEEEC-CCCCCCCCC-CeEEEEeCcchhhhhCCChhhhHhhh
Confidence 987665542 122245678899999999999999 558999998 89999999999999999999998777
No 16
>3ivr_A Putative long-chain-fatty-acid COA ligase; structural genomics, PSI-2, protein S initiative, fatty acid synthesis; HET: GOL; 2.00A {Rhodopseudomonas palustris} SCOP: e.23.1.0
Probab=100.00 E-value=3e-57 Score=442.72 Aligned_cols=367 Identities=23% Similarity=0.352 Sum_probs=308.7
Q ss_pred CCCCHHhHHHhhhccCCCCcEEEeCCCCCeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHHhCC
Q 014952 23 NHLPLHTYCFENISQFADRPCIINGPTGDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGA 102 (415)
Q Consensus 23 ~~~tl~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~ 102 (415)
.++|+.+.|.++++++|+++|+++. ++++||+||.++++++|+.|+++|+++||+|+++++|++++++++|||+++|+
T Consensus 4 ~~~tl~~~l~~~a~~~pd~~Al~~~--~~~~Ty~eL~~~~~~lA~~L~~~Gv~~gd~V~i~~~~~~~~~~~~lA~~~~Ga 81 (509)
T 3ivr_A 4 HDFTLADVYRRNAALFPDRTAFMVD--GVRLTHRDYLARAERLASGLLRDGVHTGDRVAILSQNCSEMIELIGAVALIGA 81 (509)
T ss_dssp TCCCHHHHHHHHHHHSTTSEEEEET--TEEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECCSCHHHHHHHHHHHHTTC
T ss_pred CcCCHHHHHHHHHHHCCCceEEEEC--CcEEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHhCC
Confidence 3689999999999999999999997 89999999999999999999999999999999999999999999999999999
Q ss_pred eEeecCCCCCHHHHHHHHHhcCceEEEEcccchHHHHhhhhhc-C-ceEEEeCCCCCCccchhhhhhhcccCCCCcccCC
Q 014952 103 TSTTANPFYTPPEIAKQAIASKAKIIITQAVYNDKVRDLSEHH-G-ARIVTIDPPPENCLHFSELITQADENEIPAVKIN 180 (415)
Q Consensus 103 ~~v~l~~~~~~~~~~~~l~~~~~~~vl~~~~~~~~~~~~~~~~-~-~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 180 (415)
+++|+++.++.+++.+++++++++++|++.+..+.+....... . ..++.+++... .+.++.........+.....
T Consensus 82 ~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~ 158 (509)
T 3ivr_A 82 ILLPVNYRLNADEIAFVLGDGAPSVVVAGTDYRDIVAGVLPSLGGVKKAYAIGDGSG---PFAPFKDLASDTPFSAPEFG 158 (509)
T ss_dssp EEEECCTTSCHHHHHHHHHHHCEEEEEECSTTHHHHHHHGGGCSSCCEEEESSCCCS---SCEEGGGTCCCSCCCCCCCC
T ss_pred EEEecCCCCCHHHHHHHHHhcCceEEEECcchhhhHHhhhcccCCceEEEEcCCCCc---ChhhHhhccCCCCCCcCCCC
Confidence 9999999999999999999999999999998877644433222 2 23455544222 22232111222233345667
Q ss_pred CCCeEEEecCCCCCCCCceeeechHHHHHHHhhhhcCCCCCccCCCCcEEEEccchHHHHhhHHHHHHHHHcCcEEEEcC
Q 014952 181 PDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIMQ 260 (415)
Q Consensus 181 ~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~l~~l~~G~~~v~~~ 260 (415)
++++++|+|||||||.||+|.++|+++.+...+... .+.+.+++++++.+|++|.+++.. .+.++..|+..++..
T Consensus 159 ~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~----~~~~~~~d~~l~~~p~~~~~g~~~-~~~~~~~~g~~~~~~ 233 (509)
T 3ivr_A 159 AADGFVIIHTAAVGGRPRGALISQGNLLIAQSSLVD----AWRLTEADVNLGMLPLFHVTGLGL-MLTLQQAGGASVIAA 233 (509)
T ss_dssp TTSEEEEEEEEC--CCEEEEEEEHHHHHHHHHHHHH----HTTCCTTCEEEECSCTTSHHHHHH-HHHHHHHTCEEEECS
T ss_pred ccccEEEEeCCCCCCCCcEEEEehHHHHHHHHHHHH----hhCCCCCcEEEEeCCCcchhHHHH-HHHHHHhCCcEEEec
Confidence 899999999999999999999999999998888777 456889999999999999999985 455455555555555
Q ss_pred CCCHHHHHHHHHhcCceeeecchHHHHHHHcCCCCCCCCcccceeeeecCCCCCHHHHHHHHhhCCCCccccccccccCC
Q 014952 261 KFDIVKLMELVQKYKVTVAPFVPPIVLAVAKSGDVDKYDMSSIRTVMSGAAPMGKELEDAVRAKLPHAKLGQGYGMTEAG 340 (415)
Q Consensus 261 ~~~~~~~~~~l~~~~~t~l~~~p~~l~~l~~~~~~~~~~l~~lr~v~~gG~~l~~~~~~~~~~~~~~~~~~~~YG~tE~~ 340 (415)
.+++..+++.++++++|++.++|+++..+++.. ...+++++|.+..+|++ +..+++.+.+|++++++.||+||++
T Consensus 234 ~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~--~~~~l~~lr~~~~~g~~---~~~~~~~~~~~~~~~~~~YG~TE~~ 308 (509)
T 3ivr_A 234 KFDPAQAARDIEAHKVTVMAEFAPMLGNILDQA--APAQLASLRAVTGLDTP---ETIERFEATCPNATFWATFGQSETS 308 (509)
T ss_dssp SCCHHHHHHHHHHHTCCEEEEETTHHHHHHHHC--CGGGGTTCCEEEEECCH---HHHHHHHHHCTTCEEEEEEEEGGGT
T ss_pred ccCHHHHHHHHHHHCCcEEEecHHHHHHHHhcc--cccchhhhheecccCCh---HHHHHHHHhcCCCeEEcccCccccc
Confidence 889999999999999999999999999998876 44567899999999987 8999999999999999999999999
Q ss_pred ccccccccccCCccccCCCcccccccCCeEEEEeCCCCCCCCCCCceeEEEecCccccccccCCcceeeee
Q 014952 341 PVLSMCLAFAKEPFEIKSGACGTVVRNAEMKIVDPDTGISLPRNQAGEICIRGAQIMKGTYHIYAPFLLSI 411 (415)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~G~p~~~~~v~i~d~~~~~~~~~g~~Gel~v~~~~~~~gY~~~~~~~~~~~ 411 (415)
++.+.+. .......+|+|+++++++|+|++ +++++.|+.|||+|+||+++.|||++|+.+..+|
T Consensus 309 ~~~~~~~------~~~~~~~~G~p~~~~~~~i~d~~-~~~~~~g~~GEl~v~g~~~~~gY~~~~~~t~~~f 372 (509)
T 3ivr_A 309 GLSTFAP------YRDRPKSAGRPLFWRTVAVVDAE-DRPLPPGEVGEIVLRGPTVFKGYWNNAAATQHAF 372 (509)
T ss_dssp EEEEEEE------GGGSTTSCCEECTTCEEEEECTT-SCBCCTTCCEEEEEESTTSCCEETTCHHHHHHHT
T ss_pred cccccCc------cccCCCcccccCCCcEEEEECCC-CCCCCCCCceEEEEecCCccccccCCHHHhHHHh
Confidence 7665542 12233459999999999999954 9999999999999999999999999999988766
No 17
>1v25_A Long-chain-fatty-acid-COA synthetase; ligase, structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: ANP; 2.30A {Thermus thermophilus} SCOP: e.23.1.1 PDB: 1ult_A* 1v26_A*
Probab=100.00 E-value=1.6e-57 Score=447.38 Aligned_cols=380 Identities=24% Similarity=0.365 Sum_probs=312.4
Q ss_pred CCCCHHhHHHhhhccCCCCcEEEeC--CCCCeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHHh
Q 014952 23 NHLPLHTYCFENISQFADRPCIING--PTGDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYI 100 (415)
Q Consensus 23 ~~~tl~~~l~~~a~~~p~~~a~~~~--~~~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~ 100 (415)
...|+.+.|.++++++|+++|+++. +.++++||+||.++++++|+.|+++|+++||+|+++++|++++++++|||+++
T Consensus 16 ~~~~l~~~l~~~a~~~p~~~a~~~~~~~~~~~~Ty~el~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~~~~lA~~~~ 95 (541)
T 1v25_A 16 EELNLWDFLERAAALFGRKEVVSRLHTGEVHRTTYAEVYQRARRLMGGLRALGVGVGDRVATLGFNHFRHLEAYFAVPGM 95 (541)
T ss_dssp CCCCTHHHHHHHHHHSTTCEEEEECTTSCEEEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECCSSHHHHHHHHHHHHT
T ss_pred CCCCHHHHHHHHHHhCCCceEEEEecCCCCceecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHHHHhc
Confidence 3579999999999999999999953 22578999999999999999999999999999999999999999999999999
Q ss_pred CCeEeecCCCCCHHHHHHHHHhcCceEEEEcccchHHHHhhhhhcC-c-eEEEeCCCC-CCccchhhhhhhcccCCCCcc
Q 014952 101 GATSTTANPFYTPPEIAKQAIASKAKIIITQAVYNDKVRDLSEHHG-A-RIVTIDPPP-ENCLHFSELITQADENEIPAV 177 (415)
Q Consensus 101 G~~~v~l~~~~~~~~~~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~-~-~~i~~~~~~-~~~~~~~~l~~~~~~~~~~~~ 177 (415)
|++++|+++.++.+++.+++++++++++|++.+..+.+........ . .++.++... .....+++++..... ..
T Consensus 96 Gav~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~ 171 (541)
T 1v25_A 96 GAVLHTANPRLSPKEIAYILNHAEDKVLLFDPNLLPLVEAIRGELKTVQHFVVMDEKAPEGYLAYEEALGEEAD----PV 171 (541)
T ss_dssp TCEEEECCTTSCHHHHHHHHHHHTCSEEEECGGGHHHHHHHGGGCSSCCEEEESSSCCCTTCEEHHHHCCSCCC----CC
T ss_pred CcEEEecCcccCHHHHHHHHHhCCCcEEEEChhHHHHHHHHHhhCCCccEEEEecCCCCcccccHHHHhhccCC----cc
Confidence 9999999999999999999999999999999988777665543322 2 355554322 123345555221111 13
Q ss_pred cCCCCCeEEEecCCCCCCCCceeeechHHHHHHHhhhhcCCCCCccCCCCcEEEEccchHHHHhhHHHHHHHHHcCcEEE
Q 014952 178 KINPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAIL 257 (415)
Q Consensus 178 ~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~l~~l~~G~~~v 257 (415)
...++++++|+|||||||.||+|+++|+++........... .+.+.+++++++.+|++|..++. .++.++..|++++
T Consensus 172 ~~~~~~~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~--~~~~~~~d~~l~~~p~~h~~~~~-~~~~~l~~G~~~v 248 (541)
T 1v25_A 172 RVPERAACGMAYTTGTTGLPKGVVYSHRALVLHSLAASLVD--GTALSEKDVVLPVVPMFHVNAWC-LPYAATLVGAKQV 248 (541)
T ss_dssp CCCTTSEEEEEEECSSSSSCEEEEEEHHHHHHHHHHTTSTT--TTCCCTTCEEEECSCTTSHHHHT-HHHHHHHHTCEEE
T ss_pred cCCCCCcEEEEECCCCCCCCcEeeeehHHHHHHHhhhhhcc--cccCCCCCEEEEeccchhhhHHH-HHHHHHhcCceEE
Confidence 45678999999999999999999999999987665432111 34578899999999999999986 4778899999999
Q ss_pred EcCC-CCHHHHHHHHHhcCceeeecchHHHHHHHcCCCCCCCCcccceeeeecCCCCCHHHHHHHHhhCCCCcccccccc
Q 014952 258 IMQK-FDIVKLMELVQKYKVTVAPFVPPIVLAVAKSGDVDKYDMSSIRTVMSGAAPMGKELEDAVRAKLPHAKLGQGYGM 336 (415)
Q Consensus 258 ~~~~-~~~~~~~~~l~~~~~t~l~~~p~~l~~l~~~~~~~~~~l~~lr~v~~gG~~l~~~~~~~~~~~~~~~~~~~~YG~ 336 (415)
+.+. +++..+++.++++++|++.++|+++..|++.......++++||.+++||+++++++.+++ +.+ ++++++.||+
T Consensus 249 ~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~i~~gG~~l~~~~~~~~-~~~-g~~~~~~YG~ 326 (541)
T 1v25_A 249 LPGPRLDPASLVELFDGEGVTFTAGVPTVWLALADYLESTGHRLKTLRRLVVGGSAAPRSLIARF-ERM-GVEVRQGYGL 326 (541)
T ss_dssp ECTTCCSHHHHHHHHHHTTCCEEEECHHHHHHHHHHHHHHTCCCSSCCEEEECSSCCCHHHHHHH-HHT-TCEEEEEEEC
T ss_pred eeCCCCCHHHHHHHHHhcCeeEEecchHHHHHHHhhhhccCCcchhccEEEECCCCCCHHHHHHH-HHh-CCceeecccc
Confidence 9874 799999999999999999999999999987654445568999999999999999999999 667 8999999999
Q ss_pred ccCCccccccccccC---Cc---cccCCCcccccccCCeEEEEeCCCCCCCCC--CCceeEEEecCccccccccCCccee
Q 014952 337 TEAGPVLSMCLAFAK---EP---FEIKSGACGTVVRNAEMKIVDPDTGISLPR--NQAGEICIRGAQIMKGTYHIYAPFL 408 (415)
Q Consensus 337 tE~~~~~~~~~~~~~---~~---~~~~~~~~G~p~~~~~v~i~d~~~~~~~~~--g~~Gel~v~~~~~~~gY~~~~~~~~ 408 (415)
||++++++.+..... .. .....+++|+|+|+++++|+| +++++++. ++.|||+|+||+++.|||++|+++.
T Consensus 327 TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d-~~g~~~~~~~~~~GEl~v~g~~v~~GY~~~p~~t~ 405 (541)
T 1v25_A 327 TETSPVVVQNFVKSHLESLSEEEKLTLKAKTGLPIPLVRLRVAD-EEGRPVPKDGKALGEVQLKGPWITGGYYGNEEATR 405 (541)
T ss_dssp GGGSSEEEECCCCGGGTTSCHHHHHHHHTSCBEECTTCEEEEEC-TTSCBCCSSSCCCEEEEEESTTSBSSCBTCHHHHH
T ss_pred cccccceecccccccccccCccccccccCCCCCcCCCcEEEEEC-CCCCCCCCCCCcceEEEEeCcchhccccCChhhhh
Confidence 999976655421100 00 012357899999999999999 45888885 3689999999999999999999998
Q ss_pred eeee
Q 014952 409 LSIV 412 (415)
Q Consensus 409 ~~~~ 412 (415)
.+|.
T Consensus 406 ~~f~ 409 (541)
T 1v25_A 406 SALT 409 (541)
T ss_dssp TTBC
T ss_pred hhcc
Confidence 7774
No 18
>3rg2_A Enterobactin synthase component E (ENTE), 2,3-DIH dihydroxybenzoate synthetase, isochroismatase...; adenylate-forming enzymes, ANL superfamily; HET: SVS PNS; 3.10A {Escherichia coli}
Probab=100.00 E-value=9.7e-58 Score=455.61 Aligned_cols=395 Identities=19% Similarity=0.288 Sum_probs=328.5
Q ss_pred CccccccccceeecCCCCCCCCCCCCHHhHHHhhhccCCCCcEEEeCCCCCeeeHHHHHHHHHHHHHHHHHcCCCCCCEE
Q 014952 1 MEAKQDHQEFIFRSKLPDIYIPNHLPLHTYCFENISQFADRPCIINGPTGDVYTYADVELTSRKVAAGLSKLGVQKGDVI 80 (415)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~tl~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V 80 (415)
|+++...+...+.+.+++...++++|+.++|.++++ |+++|+++. ++++||+||.++++++|+.|+++|+++||+|
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~a~--pd~~Av~~~--~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~V 78 (617)
T 3rg2_A 3 MSIPFTRWPEEFARRYREKGYWQDLPLTDILTRHAA--SDSIAVIDG--ERQLSYRELNQAADNLACSLRRQGIKPGETA 78 (617)
T ss_dssp -CCCCCCCCHHHHHHHHHTTSCCCCCTTHHHHTTTT--CCSEEEEET--TEEEEHHHHHHHHHHHHHHHHHTTCCTTCEE
T ss_pred CCcccccCcHHHHhhHhhcCCCCcCCHHHHHHHhhC--CCCeEEecC--CceEeHHHHHHHHHHHHHHHHHcCCCCCCEE
Confidence 677777777777777667777889999999999988 999999998 8999999999999999999999999999999
Q ss_pred EEEcCCchhHHHHHHHHHHhCCeEeecCCCCCHHHHHHHHHhcCceEEEEcccch-----HHHHhhhhh-cCceEEEe-C
Q 014952 81 MLLLQNCPQFVFAFLGASYIGATSTTANPFYTPPEIAKQAIASKAKIIITQAVYN-----DKVRDLSEH-HGARIVTI-D 153 (415)
Q Consensus 81 ~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~vl~~~~~~-----~~~~~~~~~-~~~~~i~~-~ 153 (415)
+++++|+.++++++|||+++|++++|+++.++.+++.++++++++.+++++.... ......... .....+.+ +
T Consensus 79 ~l~~~~s~~~vva~lA~l~aG~~~vpl~~~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (617)
T 3rg2_A 79 LVQLGNVAELYITFFALLKLGVAPVLALFSHQRSELNAYASQIEPALLIADRQHALFSGDDFLNTFVTEHSSIRVVQLLN 158 (617)
T ss_dssp EEECCSSHHHHHHHHHHHHHTCEEEEECTTCCHHHHHHHHHHHCCSEEEEETTSGGGSSSHHHHHHHHHSTTCCEEEEET
T ss_pred EEECCCcHHHHHHHHHHHhcCeEEccCCccccHHHHHHHHhhcCceEEEecccccccccHHHHHHHhhcCCccceeeecc
Confidence 9999999999999999999999999999999999999999999999999987654 222222222 22333333 3
Q ss_pred CCCCCccchhhhhhhcccCCCCcccCCCCCeEEEecCCCCCCCCceeeechHHHHHHHhhhhcCCCCCccCCCCcEEEEc
Q 014952 154 PPPENCLHFSELITQADENEIPAVKINPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCV 233 (415)
Q Consensus 154 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (415)
.. ....+.+. ..............++++++|+|||||||.||||+++|+++.+.+..... .+.+.+++++++.
T Consensus 159 ~~--~~~~~~~~-~~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~~~~~~~~~~~----~~~~~~~~~~l~~ 231 (617)
T 3rg2_A 159 DS--GEHNLQDA-INHPAEDFTATPSPADEVAYFQLSGGTTGTPKLIPRTHNDYYYSVRRSVE----ICQFTQQTRYLCA 231 (617)
T ss_dssp CC--STTBHHHH-HHSCCSSCCCCCCCTTSEEEEEECCCSSSSCCEEEEEHHHHHHHHHHHHH----HHTCCTTCEEEEC
T ss_pred cc--cccchhhh-hcccccccCCCCCCCCCeEEEEECCCcCCCCCEeehhHHHHHHHHHHHHH----hcCCCCcceEEEe
Confidence 22 12233443 22222233344567799999999999999999999999999998888777 5568899999999
Q ss_pred cchHHHHhhHH-HHHHHHHcCcEEEEcCCCCHHHHHHHHHhcCceeeecchHHHHHHHcCCC--CCCCCcccceeeeecC
Q 014952 234 LPLFHIYSLNS-VLLCALRVGAAILIMQKFDIVKLMELVQKYKVTVAPFVPPIVLAVAKSGD--VDKYDMSSIRTVMSGA 310 (415)
Q Consensus 234 ~pl~~~~g~~~-~~l~~l~~G~~~v~~~~~~~~~~~~~l~~~~~t~l~~~p~~l~~l~~~~~--~~~~~l~~lr~v~~gG 310 (415)
+|++|.+++.. .++.++..|+++++.+..++..+++.++++++|++.++|+++..+++... .....+++||.+++||
T Consensus 232 ~p~~~~~~~~~~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~l~~lr~i~~gG 311 (617)
T 3rg2_A 232 IPAAHNYAMSSPGSLGVFLAGGTVVLAADPSATLCFPLIEKHQVNVTALVPPAVSLWLQALIEGESRAQLASLKLLQVGG 311 (617)
T ss_dssp SCTTSHHHHHSSHHHHHHHHTCEEEECSSCCHHHHHHHHHHTTCCEEEECHHHHHHHHHHHHTTCCTTTTTTCCEEEEES
T ss_pred ccchhhhhhhHHHHHHHHHcCCEEEEeCCCCHHHHHHHHHHhCCcEEEcchHHHHHHHHhhhcccccccCCCccEEEEcC
Confidence 99999988764 57889999999999998999999999999999999999999998876532 2234689999999999
Q ss_pred CCCCHHHHHHHHhhCCCCccccccccccCCccccccccccCCccccCCCcccccc-cCCeEEEEeCCCCCCCCCCCceeE
Q 014952 311 APMGKELEDAVRAKLPHAKLGQGYGMTEAGPVLSMCLAFAKEPFEIKSGACGTVV-RNAEMKIVDPDTGISLPRNQAGEI 389 (415)
Q Consensus 311 ~~l~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~G~p~-~~~~v~i~d~~~~~~~~~g~~Gel 389 (415)
+++++++.+++.+.+ ++++++.||+||++...+.. .........++|+|+ ++++++|+| +++++++.|+.|||
T Consensus 312 e~l~~~~~~~~~~~~-~~~~~~~YG~tE~~~~~~~~----~~~~~~~~~~~G~p~~~~~~~~i~d-~~~~~~p~G~~GEl 385 (617)
T 3rg2_A 312 ARLSATLAARIPAEI-GCQLQQVFGMAEGLVNYTRL----DDSAEKIIHTQGYPMCPDDEVWVAD-AEGNPLPQGEVGRL 385 (617)
T ss_dssp SCCCHHHHHHHHHHT-CSEEEEEEEETTEEEEECCT----TSCHHHHHHCCCEESCTTCEEEEEC-TTSCBCCTTCCEEE
T ss_pred CcCCHHHHHHHHHHh-CCcEEEEeccCcceeecccC----CCcccccccCCCccCCCCceEEEEC-CCCCCCCCCCceEE
Confidence 999999999999999 89999999999988533221 111222345789998 788999999 66999999999999
Q ss_pred EEecCccccccccCCcceeeeee
Q 014952 390 CIRGAQIMKGTYHIYAPFLLSIV 412 (415)
Q Consensus 390 ~v~~~~~~~gY~~~~~~~~~~~~ 412 (415)
+|+||++++|||++|+.|..+|.
T Consensus 386 ~i~G~~v~~GY~~~p~~t~~~f~ 408 (617)
T 3rg2_A 386 MTRGPYTFRGYYKSPQHNASAFD 408 (617)
T ss_dssp EEECSSSCSCCTTCHHHHHHHBC
T ss_pred EecCccccchhcCChhhhhhccC
Confidence 99999999999999999988884
No 19
>4dg8_A PA1221; ANL superfamily, adenylation domain, peptidyl carrier protei ribosomal peptide synthetase, NRPS, valine adenylation, LIG; HET: AMP; 2.15A {Pseudomonas aeruginosa} PDB: 4dg9_A*
Probab=100.00 E-value=1.6e-57 Score=452.51 Aligned_cols=366 Identities=17% Similarity=0.147 Sum_probs=306.2
Q ss_pred CCCCCCCCCHHhHHHhhhccCCCCcEEEeCCCCCeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHH
Q 014952 18 DIYIPNHLPLHTYCFENISQFADRPCIINGPTGDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGA 97 (415)
Q Consensus 18 ~~~~~~~~tl~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~ 97 (415)
..+.+.+.|+.+.|.++++++|+++|+++. ++++||+||.++++++|+.|+++|+++||+|+++++|+.++++++|||
T Consensus 20 ~~~~~~~~tl~~~~~~~a~~~Pd~~Av~~~--~~~lTY~eL~~~a~~lA~~L~~~Gv~~g~~V~i~~~~s~~~vva~lai 97 (620)
T 4dg8_A 20 LLDLYAHPTVVARFSEMAALHPHREAIRDR--FGSVDYRQLLDSAEQLSDYLLEHYPQPGVCLGVYGEYSRESITCLLAI 97 (620)
T ss_dssp TTSGGGSCCHHHHHHHHHHHCTTSEEEEET--TEEEEHHHHHHHHHHHHHHHHHHCCSSCCEEEEESSSCHHHHHHHHHH
T ss_pred cCCCCCCCCHHHHHHHHHHhCCCCeEEEcC--CCcCcHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHH
Confidence 334445789999999999999999999997 889999999999999999999999999999999999999999999999
Q ss_pred HHhCCeEeecCCCCCHHHHHHHHHhcCceEEEEcccchHHHHhhhhhcCceEEEeCCCCCCccchhhhhhhcccCCCCcc
Q 014952 98 SYIGATSTTANPFYTPPEIAKQAIASKAKIIITQAVYNDKVRDLSEHHGARIVTIDPPPENCLHFSELITQADENEIPAV 177 (415)
Q Consensus 98 ~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~~ 177 (415)
+++|++++|++|.++.+++.++++++++++++++........ ....+.+ ... ..........
T Consensus 98 lkaGa~~vpld~~~p~~~l~~il~~~~~~~vl~~~~~~~~~~------~~~~~~~----------~~~--~~~~~~~~~~ 159 (620)
T 4dg8_A 98 LLSGHHYLYIDLKQPAAWNAELCRQVDCRLILDCSTTPTPAN------GLPCVPV----------RHL--PAAPASVARP 159 (620)
T ss_dssp HHTTCEEEECCTTSCHHHHHHHHHHHTEEEEEECCSSCCCCT------TSCEEEG----------GGC--CCCCCCSSCC
T ss_pred HHhCCEEEeeCccChHHHHHHHHHhCCCcEEEecCccccccc------CCceeee----------ccC--CcCCccccCC
Confidence 999999999999999999999999999999997654322110 1111111 111 1111112233
Q ss_pred cCCCCCeEEEecCCCCCCCCceeeechHHHHHHHhhhhcCCCCCccCCCCcEEEEccchHHHHhhHHHHHHHHHcCcEEE
Q 014952 178 KINPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAIL 257 (415)
Q Consensus 178 ~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~l~~l~~G~~~v 257 (415)
...++++++|+|||||||.||||+++|+++.+.... .. .+.+.++++++...|++|..++. .++.++..|++++
T Consensus 160 ~~~~~d~a~iiyTSGSTG~PKgV~~th~~l~~~~~~-~~----~~~~~~~d~~l~~~p~~~~~~~~-~~~~~l~~G~~~v 233 (620)
T 4dg8_A 160 CFAADQIAYINFSSGTTGRPKAIACTHAGITRLCLG-QS----FLAFAPQMRFLVNSPLSFDAATL-EIWGALLNGGCCV 233 (620)
T ss_dssp CCCTTSEEEEEEEBSSSSSCEEEEEEHHHHHHHHSS-CG----GGTTCTTCEEEECSCTTSTHHHH-HHHHHHTTTCEEE
T ss_pred CCCCCCeEEEEECCCccccCeEEEEchHHHHHHHHH-HH----hhCCCCCCEEEEECccCHHHHHH-HHHHHHhcCCEEE
Confidence 456799999999999999999999999999876654 22 45678999999999999999987 4889999999999
Q ss_pred EcC--CCCHHHHHHHHHhcCceeeecchHHHHHHHcCCCCCCCCcccceeeeecCCCCCHHHHHHHHhhCCCCccccccc
Q 014952 258 IMQ--KFDIVKLMELVQKYKVTVAPFVPPIVLAVAKSGDVDKYDMSSIRTVMSGAAPMGKELEDAVRAKLPHAKLGQGYG 335 (415)
Q Consensus 258 ~~~--~~~~~~~~~~l~~~~~t~l~~~p~~l~~l~~~~~~~~~~l~~lr~v~~gG~~l~~~~~~~~~~~~~~~~~~~~YG 335 (415)
+.+ .+++..+.+.++++++|++.++|+++..+.+.. ...+++||.+++||++++.+..+++.+.++++++++.||
T Consensus 234 ~~~~~~~~~~~~~~~i~~~~vt~~~~~Ps~~~~l~~~~---~~~l~~lr~v~~gGe~l~~~~~~~~~~~~~~~~l~n~YG 310 (620)
T 4dg8_A 234 LNDLGPLDPGVLRQLIGERGADSAWLTASLFNTLVDLD---PDCLGGLRQLLTGGDILSVPHVRRALLRHPRLHLVNGYG 310 (620)
T ss_dssp ECCSSSCCHHHHHHHHHTTCCCEEEEEHHHHHHHHHHC---GGGGTTCSEEEEESSCCCHHHHHHHHHHCTTCEEEEEEC
T ss_pred eCccccCCHHHHHHHHHHhCCcEEEccHHHHHHHHhcC---hhhCCCccEEEEEeCcCCHHHHHHHHHhCCCeEEEeeEc
Confidence 975 579999999999999999999999999998643 345789999999999999999999998888999999999
Q ss_pred cccCCccccccccccCCccccCCCcccccccCCeEEEEeCCCCCCCCCCCceeEEEecCccccccccCCcceeeeeee
Q 014952 336 MTEAGPVLSMCLAFAKEPFEIKSGACGTVVRNAEMKIVDPDTGISLPRNQAGEICIRGAQIMKGTYHIYAPFLLSIVC 413 (415)
Q Consensus 336 ~tE~~~~~~~~~~~~~~~~~~~~~~~G~p~~~~~v~i~d~~~~~~~~~g~~Gel~v~~~~~~~gY~~~~~~~~~~~~~ 413 (415)
+||++.+.+... ...........++|+|+++++++|+|++....++.|+.|||+|+||++++|||++|+.|..+|+.
T Consensus 311 ~TE~~~~~~~~~-~~~~~~~~~~~~iG~p~~~~~~~i~d~~~~~~~~~g~~GEl~i~G~~v~~GY~~~p~~t~~~f~~ 387 (620)
T 4dg8_A 311 PTENTTFTCCHV-VTDDDLEEDDIPIGKAIAGTAVLLLDEHGQEIAEPDRAGEIVAFGAGLAQGYRNDAARTRASFVE 387 (620)
T ss_dssp CGGGCSCSEEEE-CCTGGGGSSSCCCBEECTTEEEEEECTTSCBCCSSSCCEEEEEEETTCCSEETTCHHHHHHHEEE
T ss_pred hhhhhhheEEEe-ccccccCCCCCCceecccCcEEEEECccCCCCCCCCCceEEEEeccccccccCCChhhhhhhhcc
Confidence 999996654432 12222334567899999999999999664444899999999999999999999999999999864
No 20
>4gr5_A Non-ribosomal peptide synthetase; MBTH-like domain, adenylation domain, ligase, rossmann fold, binding; HET: APC TLA; 1.92A {Streptomyces lydicus} PDB: 4gr4_A
Probab=100.00 E-value=2.4e-57 Score=448.89 Aligned_cols=362 Identities=20% Similarity=0.269 Sum_probs=305.3
Q ss_pred CCCCCHHhHHHhhhccCCCCcEEEeCCCCCeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHHhC
Q 014952 22 PNHLPLHTYCFENISQFADRPCIINGPTGDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIG 101 (415)
Q Consensus 22 ~~~~tl~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G 101 (415)
|...++.++|.++++++|+++|+++. ++++||+||.++++++|++|+++|+++||+|+++++|++++++++|||+++|
T Consensus 72 ~~~~~l~~~l~~~a~~~pd~~A~~~~--~~~~Ty~el~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~~~~~~~lA~~~~G 149 (570)
T 4gr5_A 72 PAGACVHELFEAQAARAPDAVALLHE--ADELTYGALNERANRLAHRLVGLGVAPGTLVGVHLERGFDMVVALLAVLKAG 149 (570)
T ss_dssp CCSCCHHHHHHHHHHHCTTSEEEEET--TEEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECCSSHHHHHHHHHHHHTT
T ss_pred CccCCHHHHHHHHHHHCCCCeEEECC--CCcEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHHHHHC
Confidence 44689999999999999999999997 8899999999999999999999999999999999999999999999999999
Q ss_pred CeEeecCCCCCHHHHHHHHHhcCceEEEEcccchHHHHhhhhhcCceEEEeCCCCCCccchhhhhhhcccCCCCcccCCC
Q 014952 102 ATSTTANPFYTPPEIAKQAIASKAKIIITQAVYNDKVRDLSEHHGARIVTIDPPPENCLHFSELITQADENEIPAVKINP 181 (415)
Q Consensus 102 ~~~v~l~~~~~~~~~~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 181 (415)
++++|++|.++.+++.++++++++++++++.+....+. ....+.+.+.. ..............+
T Consensus 150 ~~~vpl~~~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~------~~~~~~~~~~~----------~~~~~~~~~~~~~~~ 213 (570)
T 4gr5_A 150 GGYTMLDPQFPVERLALSLEDTGAPLLVTSRPLSGRLT------GTTTLYVEDEA----------ASDAPAGNLATGVGP 213 (570)
T ss_dssp CEEEECCTTSCHHHHHHHHHHHTCSEEEECTTTTTSSC------SSEEEECCC-----------------CCCCCCCCCT
T ss_pred CEEEEcCCCChHHHHHHHHHhcCCCEEEecchhhhccc------CCcceeeeccc----------cccccccccCCCCCC
Confidence 99999999999999999999999999999876543221 12222222110 111111222345678
Q ss_pred CCeEEEecCCCCCCCCceeeechHHHHHHHhhhhcCCCCCccCCCCcEEEEccchHHHHhhHHHHHHHHHcCcEEEEcC-
Q 014952 182 DDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIMQ- 260 (415)
Q Consensus 182 ~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~l~~l~~G~~~v~~~- 260 (415)
+++++|+|||||||.||+|+++|+++.+.... .. .+.+.++++++..+|++|..+.. .++.++..|+++++.+
T Consensus 214 ~d~a~i~~TSGTTG~PKgV~~th~~l~~~~~~-~~----~~~~~~~d~~l~~~p~~~~~~~~-~~~~~l~~G~~~v~~~~ 287 (570)
T 4gr5_A 214 EDVACVMFTSGSTGRPKGVMSPHRALTGTYLG-QD----YAGFGPDEVFLQCSPVSWDAFGL-ELFGALLFGARCVLQSG 287 (570)
T ss_dssp TSEEEEECCSSCCSSCCCEEEEHHHHHHHHSS-CC----SSCCSTTCEEEECSCTTSSTHHH-HHHHHHTTTCEEEECSS
T ss_pred CCeEEEEECCcCCCCCeEEEEecHHHHHHHHh-hh----hcCCCCCCEEEEecCccHHHHHH-HHHHHHhcCCEEEEcCC
Confidence 99999999999999999999999999876554 22 44678999999999999876665 5788999999999986
Q ss_pred -CCCHHHHHHHHHhcCceeeecchHHHHHHHcCCCCCCCCcccceeeeecCCCCCHHHHHHHHhhCCCCccccccccccC
Q 014952 261 -KFDIVKLMELVQKYKVTVAPFVPPIVLAVAKSGDVDKYDMSSIRTVMSGAAPMGKELEDAVRAKLPHAKLGQGYGMTEA 339 (415)
Q Consensus 261 -~~~~~~~~~~l~~~~~t~l~~~p~~l~~l~~~~~~~~~~l~~lr~v~~gG~~l~~~~~~~~~~~~~~~~~~~~YG~tE~ 339 (415)
.+++..+++.++++++|++.++|+++..|++... ..+++||.+++||++++.+..+++.+.++++++++.||+||+
T Consensus 288 ~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~---~~~~~lr~~~~gG~~l~~~~~~~~~~~~~~~~l~~~YG~TE~ 364 (570)
T 4gr5_A 288 QNPDPLEIGELVARHGVTMLQLSASLFNFLVDEVP---EAFEGVRYAITGGEPASVPHVAKARRDHPALRLGNGYGPAES 364 (570)
T ss_dssp SSCCHHHHHHHHHHHTCCEEEEEHHHHHHHHHHCG---GGGTTCSEEEEESSCCCHHHHHHHHHHCTTCEEEEEECCGGG
T ss_pred ccCCHHHHHHHHHHcCCcEEEecHHHHHHHHhhch---hhCCCceEEEEecccCCHHHHHHHHHhCCCcEEEEeechhhh
Confidence 4789999999999999999999999999987642 357899999999999999999999999989999999999999
Q ss_pred CccccccccccCCccccCCCcccccccCCeEEEEeCCCCCCCCCCCceeEEEecCccccccccCCcceeeeee
Q 014952 340 GPVLSMCLAFAKEPFEIKSGACGTVVRNAEMKIVDPDTGISLPRNQAGEICIRGAQIMKGTYHIYAPFLLSIV 412 (415)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~G~p~~~~~v~i~d~~~~~~~~~g~~Gel~v~~~~~~~gY~~~~~~~~~~~~ 412 (415)
+++.+..... .........++|+|+++++++|+| +++++++.|+.|||+|+||+++.|||++|+.+..+|.
T Consensus 365 ~~~~~~~~~~-~~~~~~~~~~iG~p~~~~~v~i~d-~~~~~~~~G~~GEl~v~g~~v~~GY~~~~~~t~~~f~ 435 (570)
T 4gr5_A 365 MGFTTHHAVV-AGDLSGTALPIGVPLAGKRAYVLD-DDLKPAANGALGELYVAGAGLAHGYVSRPALTAERFV 435 (570)
T ss_dssp CSCSEEEECC-GGGTTSSSCCCBEECTTEEEEEEC-TTSCBCCTTCEEEEEEEETTCCCEETTCHHHHHHHEE
T ss_pred eeeeeeeeec-ccccCCCccccceeeCCCEEEEEC-CCCCCCCCCCcEEEEEeecccchhcCCCchhhhcccc
Confidence 8765543211 112233456799999999999999 5599999999999999999999999999999998885
No 21
>1t5h_X 4-chlorobenzoyl COA ligase; adenylate-forming coenzyme A ligase domain alternation confo change; 2.00A {Alcaligenes SP} SCOP: e.23.1.1 PDB: 1t5d_X 3cw9_A* 3cw8_X* 2qvz_X* 2qw0_X* 3dlp_X* 2qvx_X* 2qvy_X*
Probab=100.00 E-value=2.5e-56 Score=435.53 Aligned_cols=360 Identities=22% Similarity=0.285 Sum_probs=301.8
Q ss_pred CCHHhHHHhhhccCCCCcEEEeCCCCCeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHHhCCeE
Q 014952 25 LPLHTYCFENISQFADRPCIINGPTGDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGATS 104 (415)
Q Consensus 25 ~tl~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~ 104 (415)
+|+.++|.++++++|+++|+++...++++||+||.++++++|+.|+++|+++||+|+++++|+.++++++|||+++|+++
T Consensus 2 ~tl~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~~A~~L~~~Gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~ 81 (504)
T 1t5h_X 2 QTVNEMLRRAATRAPDHCALAVPARGLRLTHAELRARVEAVAARLHADGLRPQQRVAVVAPNSADVVIAILALHRLGAVP 81 (504)
T ss_dssp CCHHHHHHHHHHHCTTSEEEEETTTTEEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECCSCHHHHHHHHHHHHHTCEE
T ss_pred CcHHHHHHHHHHhCCCceEEEEcCCCceeEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHhCcEE
Confidence 58999999999999999999987556899999999999999999999999999999999999999999999999999999
Q ss_pred eecCCCCCHHHHHHHHHhcCceEEEE--cccchHHH-HhhhhhcCceEEEeCCCCCCccchhhhhhhcc----cCCCCcc
Q 014952 105 TTANPFYTPPEIAKQAIASKAKIIIT--QAVYNDKV-RDLSEHHGARIVTIDPPPENCLHFSELITQAD----ENEIPAV 177 (415)
Q Consensus 105 v~l~~~~~~~~~~~~l~~~~~~~vl~--~~~~~~~~-~~~~~~~~~~~i~~~~~~~~~~~~~~l~~~~~----~~~~~~~ 177 (415)
+|+++.++.+++.+++++++++++++ +.+..+.+ ... ...+++. ++++..... ....+..
T Consensus 82 vpl~~~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~~~~~---~~~~~~~----------~~~~~~~~~~~~~~~~~~~~ 148 (504)
T 1t5h_X 82 ALLNPRLKSAELAELIKRGEMTAAVIAVGRQVADAIFQSG---SGARIIF----------LGDLVRDGEPYSYGPPIEDP 148 (504)
T ss_dssp EEECTTSCHHHHHHHHHHTTCSEEEECC--CHHHHHHHHC---CCCEEEE----------GGGTEETTEECCCSCCCCCC
T ss_pred EecCCccChHHHHHHHhhcCCcEEEEecchhhhhhhhhcc---ccceeEE----------ecchhhcCcccccCCccCCC
Confidence 99999999999999999999999999 76654443 221 2233332 223211110 1111223
Q ss_pred cCCCCCeEEEecCCCCCCCCceeeechHHHHHHHhhhhcCCCCCccC--CCCcEEEEccchHHHHhhHHHHHHHHHcCcE
Q 014952 178 KINPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYL--HKEDVILCVLPLFHIYSLNSVLLCALRVGAA 255 (415)
Q Consensus 178 ~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~--~~~~~~~~~~pl~~~~g~~~~~l~~l~~G~~ 255 (415)
...++++++|+|||||||.||+|+++|+++.+....... .+.+ .+.+++++.+|++|..++...++.++..|++
T Consensus 149 ~~~~~~~a~i~~TSGTTG~PKgV~~sh~~~~~~~~~~~~----~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~~l~~G~~ 224 (504)
T 1t5h_X 149 QREPAQPAFIFYTSGTTGLPKAAIIPQRAAESRVLFMST----QVGLRHGRHNVVLGLMPLYHVVGFFAVLVAALALDGT 224 (504)
T ss_dssp CCCTTSEEEEEECCC---CCCEEEEEGGGHHHHHHHHHH----TTCCCSSTTCEEEECSCTTSHHHHTTTHHHHHHTTCE
T ss_pred CCCCCCeEEEEeCCCCCCCCCEEEecHHHHHHHHHHHHH----hhCCCCCCCceEEeecchhhcchHHHHHHHHHHcCce
Confidence 456789999999999999999999999999988877766 3345 7889999999999999986568899999999
Q ss_pred EEEcCCCCHHHHHHHHHhcCceeeecchHHHHHHHcCC-C-CCCCCcccceeeeecCCCCCHHHHHHHHhhCCCCccccc
Q 014952 256 ILIMQKFDIVKLMELVQKYKVTVAPFVPPIVLAVAKSG-D-VDKYDMSSIRTVMSGAAPMGKELEDAVRAKLPHAKLGQG 333 (415)
Q Consensus 256 ~v~~~~~~~~~~~~~l~~~~~t~l~~~p~~l~~l~~~~-~-~~~~~l~~lr~v~~gG~~l~~~~~~~~~~~~~~~~~~~~ 333 (415)
+++.+.+++..+++.++++++|+++++|+++..|.+.. . ....++++||.+++||+++++++.+++++.+ +..+++.
T Consensus 225 ~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~l~~lr~~~~gG~~l~~~~~~~~~~~~-~~~~~~~ 303 (504)
T 1t5h_X 225 YVVVEEFRPVDALQLVQQEQVTSLFATPTHLDALAAAAAHAGSSLKLDSLRHVTFAGATMPDAVLETVHQHL-PGEKVNI 303 (504)
T ss_dssp EEECSSCCHHHHHHHHHHHTCCEEECCHHHHHHHHHHHCCTTCCCCCTTCCEEEECCTTCCHHHHHHHHHHC-CSEEEEE
T ss_pred EEeCCCCCHHHHHHHHHHhCCeEEEeChHHHHHHHhhhccccccccCccccEEEEcCCcCCHHHHHHHHHhc-Ccceeee
Confidence 99999999999999999999999999999999998764 2 3455789999999999999999999999999 7899999
Q ss_pred cccccCCccccccccccCCccccCCCcccccccCCeEEEEeCCCC---CCCCCCCceeEEEe-cCccccccccCCcceee
Q 014952 334 YGMTEAGPVLSMCLAFAKEPFEIKSGACGTVVRNAEMKIVDPDTG---ISLPRNQAGEICIR-GAQIMKGTYHIYAPFLL 409 (415)
Q Consensus 334 YG~tE~~~~~~~~~~~~~~~~~~~~~~~G~p~~~~~v~i~d~~~~---~~~~~g~~Gel~v~-~~~~~~gY~~~~~~~~~ 409 (415)
||+||++ +.... .....+++|+|+++++++|+|++ + ++++.|+.|||+|+ ||.++.|||++|+++..
T Consensus 304 YG~TE~~-~~~~~-------~~~~~~~~g~p~~~~~~~i~~~~-~~~~~~~~~g~~GEl~v~gg~~~~~GY~~~~~~t~~ 374 (504)
T 1t5h_X 304 YGTTEAM-NSLYM-------RQPKTGTEMAPGFFSEVRIVRIG-GGVDEIVANGEEGELIVAASDSAFVGYLNQPQATAE 374 (504)
T ss_dssp EEETTTE-EEEEE-------ESCSSSSEEBCCTTCCEEEECTT-SCTTCBCCTTCCEEEEEECCTTSCCCBTTCHHHHHH
T ss_pred ecccccc-ccccc-------cCCCCCccccCCCCCceeEEecc-CCCCCcCCCCCcceEEEeCCceeeceecCCchhhhh
Confidence 9999993 22211 13456789999999999999955 5 89999999999999 99999999999999887
Q ss_pred ee
Q 014952 410 SI 411 (415)
Q Consensus 410 ~~ 411 (415)
+|
T Consensus 375 ~f 376 (504)
T 1t5h_X 375 KL 376 (504)
T ss_dssp HE
T ss_pred hh
Confidence 76
No 22
>1pg4_A Acetyl-COA synthetase; AMP-forming, adenylate-forming, thioester-forming, ligase; HET: COA PRX; 1.75A {Salmonella enterica} SCOP: e.23.1.1 PDB: 1pg3_A* 2p2f_A* 2p2b_A* 2p2q_A* 2p2j_A* 2p20_A* 2p2m_A*
Probab=100.00 E-value=7.7e-57 Score=451.07 Aligned_cols=378 Identities=21% Similarity=0.299 Sum_probs=310.3
Q ss_pred CHHhHHHhhhccCCCCcEEEeCC----CCCeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHHhC
Q 014952 26 PLHTYCFENISQFADRPCIINGP----TGDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIG 101 (415)
Q Consensus 26 tl~~~l~~~a~~~p~~~a~~~~~----~~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G 101 (415)
++.++|.++++++|+++|+++.. .++++||+||.++++++|+.|+++|+++||+|+++++|++++++++|||+++|
T Consensus 77 ~~~~~l~~~a~~~pd~~Al~~~~~~~~~~~~lTY~eL~~~v~~lA~~L~~~Gv~~Gd~V~i~~~~~~e~vva~lA~~~~G 156 (652)
T 1pg4_A 77 LAANCLDRHLQENGDRTAIIWEGDDTSQSKHISYRELHRDVCRFANTLLDLGIKKGDVVAIYMPMVPEAAVAMLACARIG 156 (652)
T ss_dssp HHHHHTGGGHHHHTTSEEEEEECSSTTCEEEEEHHHHHHHHHHHHHHHHHHTCCTTCEEEEECCSSHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhccCCCceEEEEEcCCCCceeEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHHHHcC
Confidence 35677778889999999999732 24789999999999999999999999999999999999999999999999999
Q ss_pred CeEeecCCCCCHHHHHHHHHhcCceEEEEcccch---------HHHHhhhhhc---C-ceEEEeCCCC-------CCccc
Q 014952 102 ATSTTANPFYTPPEIAKQAIASKAKIIITQAVYN---------DKVRDLSEHH---G-ARIVTIDPPP-------ENCLH 161 (415)
Q Consensus 102 ~~~v~l~~~~~~~~~~~~l~~~~~~~vl~~~~~~---------~~~~~~~~~~---~-~~~i~~~~~~-------~~~~~ 161 (415)
++++|+++.++.+++.+++++++++++|+++... ..+....... . .+++.++... .....
T Consensus 157 av~vpl~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~ 236 (652)
T 1pg4_A 157 AVHSVIFGGFSPEAVAGCIIDSSSRLVITADEGVRAGRSIPLKKNVDDALKNPNVTSVEHVIVLKRTGSDIDWQEGRDLW 236 (652)
T ss_dssp CEEEECCTTSCHHHHHHHHHHHTCSEEEEESEEEETTEEEESHHHHHHHHTSTTCCSCCEEEEECSSCCCCCCCBTTEEE
T ss_pred cEEEecCCCCCHHHHHHHHHhcCCCEEEEcCccccCCcccchHHHHHHHHhcCCcCCCCEEEEEeCCCCcccccCCCcee
Confidence 9999999999999999999999999999987642 2333332221 1 3455554321 11234
Q ss_pred hhhhhhhcccCCCCcccCCCCCeEEEecCCCCCCCCceeeechHHHHHHHhh-hhcCCCCCccCCCCcEEEEccchHHHH
Q 014952 162 FSELITQADENEIPAVKINPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQ-QVDGENPNLYLHKEDVILCVLPLFHIY 240 (415)
Q Consensus 162 ~~~l~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~pl~~~~ 240 (415)
+++++.. .....+.....++++++|+|||||||.||||+++|+++...... ... .+++.++|++++..|++|..
T Consensus 237 ~~~~~~~-~~~~~~~~~~~~~d~a~ilyTSGTTG~PKgV~~sh~~~~~~~~~~~~~----~~~~~~~d~~l~~~~~~~~~ 311 (652)
T 1pg4_A 237 WRDLIEK-ASPEHQPEAMNAEDPLFILYTSGSTGKPKGVLHTTGGYLVYAATTFKY----VFDYHPGDIYWCTADVGWVT 311 (652)
T ss_dssp HHHHHTT-SCSCCCCCCEETTSEEEEEEECCSSSSCEEEEEESHHHHHHHHHHHHH----HTTCCTTCEEEECSCTTSHH
T ss_pred HHHHHhh-cCCCCCccccCCCCCEEEEeccCCCCCCceEEECchHHHHHHHHHHHH----hcCCCCCCEEEEccCCeeee
Confidence 5565322 22223334556799999999999999999999999998766543 222 34578899999999999999
Q ss_pred hhHHHHHHHHHcCcEEEEcCC----CCHHHHHHHHHhcCceeeecchHHHHHHHcCCC--CCCCCcccceeeeecCCCCC
Q 014952 241 SLNSVLLCALRVGAAILIMQK----FDIVKLMELVQKYKVTVAPFVPPIVLAVAKSGD--VDKYDMSSIRTVMSGAAPMG 314 (415)
Q Consensus 241 g~~~~~l~~l~~G~~~v~~~~----~~~~~~~~~l~~~~~t~l~~~p~~l~~l~~~~~--~~~~~l~~lr~v~~gG~~l~ 314 (415)
+....++.++..|+++++.+. +++..+++.++++++|+++++|++++.|.+... ....++++||.+++||++++
T Consensus 312 g~~~~~~~~L~~G~t~vl~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~l~sLr~i~~gGe~l~ 391 (652)
T 1pg4_A 312 GHSYLLYGPLACGATTLMFEGVPNWPTPARMCQVVDKHQVNILYTAPTAIRALMAEGDKAIEGTDRSSLRILGSVGEPIN 391 (652)
T ss_dssp HHHHTTHHHHHTTCEEEEECSCTTSSSTTHHHHHHHHHTCSEEEECHHHHHHHHTTGGGGTTTCCCTTCCEEEEESSCCC
T ss_pred chHHHHHHHHHcCceEEEECCCCCCCCHHHHHHHHHHhCCeEEEeCHHHHHHHHhcCccccccCCcCceEEEEEecCCCC
Confidence 986568899999999999874 589999999999999999999999999988654 34567899999999999999
Q ss_pred HHHHHHHHhhCC--CCccccccccccCCccccccccccCCccccCCCcccccccCCeEEEEeCCCCCCCCCCCceeEEEe
Q 014952 315 KELEDAVRAKLP--HAKLGQGYGMTEAGPVLSMCLAFAKEPFEIKSGACGTVVRNAEMKIVDPDTGISLPRNQAGEICIR 392 (415)
Q Consensus 315 ~~~~~~~~~~~~--~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~G~p~~~~~v~i~d~~~~~~~~~g~~Gel~v~ 392 (415)
+++.+++.+.++ ++++++.||+||+++.++... ......+.+++|+|++|++++|+| ++|++++.|+.|||+|+
T Consensus 392 ~~~~~~~~~~~g~~~~~i~~~YG~TE~~~~~~~~~---~~~~~~~~~s~G~p~~g~~v~i~d-~~g~~v~~g~~GEl~i~ 467 (652)
T 1pg4_A 392 PEAWEWYWKKIGKEKCPVVDTWWQTETGGFMITPL---PGAIELKAGSATRPFFGVQPALVD-NEGHPQEGATEGNLVIT 467 (652)
T ss_dssp HHHHHHHHHHTTTTCSCEEEEBCCGGGSSCSBCCC---TTTCCBCTTCCBSBCTTCCEEEEC-TTCCBCCSSEEEEEEEC
T ss_pred HHHHHHHHHHhCCCCCcEEccccCcccccceecCC---CCCcCccCCccccCcCCCeEEEEC-CCCCCcCCCceEEEEEc
Confidence 999999999983 288999999999997555431 111235678999999999999999 55999999999999999
Q ss_pred c--CccccccccCCcceeeeee
Q 014952 393 G--AQIMKGTYHIYAPFLLSIV 412 (415)
Q Consensus 393 ~--~~~~~gY~~~~~~~~~~~~ 412 (415)
| |++++|||++|+.|..+|+
T Consensus 468 g~~p~~~~gY~~~~e~~~~~~~ 489 (652)
T 1pg4_A 468 DSWPGQARTLFGDHERFEQTYF 489 (652)
T ss_dssp SCCTTCCCEETTCHHHHHHHHH
T ss_pred cCCCchhhhhcCCHHHHHhhhh
Confidence 9 7999999999999887764
No 23
>3l8c_A D-alanine--poly(phosphoribitol) ligase subunit 1; structural genomics, DLTA, ATP-binding, cytoplasm, nucleotide-binding; 2.41A {Streptococcus pyogenes serotype M6} PDB: 3lgx_A*
Probab=100.00 E-value=7.4e-57 Score=441.34 Aligned_cols=367 Identities=19% Similarity=0.222 Sum_probs=309.9
Q ss_pred CCCHHhHHHhhhccCCCCcEEEeCCCCCeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHHhCCe
Q 014952 24 HLPLHTYCFENISQFADRPCIINGPTGDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGAT 103 (415)
Q Consensus 24 ~~tl~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~ 103 (415)
..|+.+.|.++++++|+++|+++. ++++||+||.++++++|++|+++|+++||+|+++++|++++++++|||+++|++
T Consensus 3 ~~~l~~~l~~~a~~~p~~~a~~~~--~~~~Ty~el~~~~~~lA~~L~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~G~v 80 (521)
T 3l8c_A 3 LKDMIDSIEQFAQTQADFPVYDCL--GERRTYGQLKRDSDSIAAFIDSLALLAKSPVLVFGAQTYDMLATFVALTKSGHA 80 (521)
T ss_dssp CCCHHHHHHHHHHHSTTSEEEEET--TEEEEHHHHHHHHHHHHHHHHHTCCCTTCCEEEEECSSHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHHHCCCCcceecC--CCeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHHHHhCCE
Confidence 368999999999999999999997 899999999999999999999999999999999999999999999999999999
Q ss_pred EeecCCCCCHHHHHHHHHhcCceEEEEcccchHHHHhhhhhcCceEEEeCCCCCCccchhhhhh--hcccCCCCcccCCC
Q 014952 104 STTANPFYTPPEIAKQAIASKAKIIITQAVYNDKVRDLSEHHGARIVTIDPPPENCLHFSELIT--QADENEIPAVKINP 181 (415)
Q Consensus 104 ~v~l~~~~~~~~~~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~~ 181 (415)
++|+++.++.+++.++++++++++++++++....+. ....+. +.++.. .............+
T Consensus 81 ~vpl~~~~~~~~l~~il~~~~~~~ii~~~~~~~~~~------~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~ 144 (521)
T 3l8c_A 81 YIPVDVHSAPERILAIIEIAKPSLIIAIEEFPLTIE------GISLVS----------LSEIESAKLAEMPYERTHSVKG 144 (521)
T ss_dssp EEEEETTSCHHHHHHHHHHSCCSEEEESSCCCSCCT------TSEEEE----------HHHHHHHHHHTCCCCCSSCCCT
T ss_pred EEecCccccHHHHHHHHHhCCCCEEEecCccccccc------cCcccc----------hhhhhhcccccCCcccCCCCCC
Confidence 999999999999999999999999999876432211 112221 222211 11112223345678
Q ss_pred CCeEEEecCCCCCCCCceeeechHHHHHHHhhhhcCCCCCccCCCCcEEEEccchHHHHhhHHHHHHHHHcCcEEEEcCC
Q 014952 182 DDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIMQK 261 (415)
Q Consensus 182 ~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~l~~l~~G~~~v~~~~ 261 (415)
+++++|+|||||||.||+|+++|+++.+...+..... .+.....++++...|++|..+.. .++.++..|+++++.+.
T Consensus 145 ~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~--~~~~~~~~~~l~~~~~~~~~~~~-~~~~~l~~G~~~~~~~~ 221 (521)
T 3l8c_A 145 DDNYYIIFTSGTTGQPKGVQISHDNLLSFTNWMIEDA--AFDVPKQPQMLAQPPYSFDLSVM-YWAPTLALGGTLFALPK 221 (521)
T ss_dssp TSEEEEEECCC---CCCEEEEEHHHHHHHHHHHHHCT--TTCCCSSCEEECCSCTTSGGGHH-HHHHHHHTTCEEEECCG
T ss_pred CCcEEEEEcCCCCCCCCEEEEehHHHHHHHHHHhhcc--ccCCCCCCeEEecCCccHHHHHH-HHHHHHhcCCEEEEcCH
Confidence 9999999999999999999999999998777665532 24678899999999999998876 57889999999999876
Q ss_pred C---CHHHHHHHHHhcCceeeecchHHHHHHHcCCCCCCCCcccceeeeecCCCCCHHHHHHHHhhCCCCcccccccccc
Q 014952 262 F---DIVKLMELVQKYKVTVAPFVPPIVLAVAKSGDVDKYDMSSIRTVMSGAAPMGKELEDAVRAKLPHAKLGQGYGMTE 338 (415)
Q Consensus 262 ~---~~~~~~~~l~~~~~t~l~~~p~~l~~l~~~~~~~~~~l~~lr~v~~gG~~l~~~~~~~~~~~~~~~~~~~~YG~tE 338 (415)
. ++..+++.+.++++|++.++|+++..+.........+++++|.+++||++++.++.+++.+.++++++++.||+||
T Consensus 222 ~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~~~~gG~~l~~~~~~~~~~~~~~~~i~~~YG~TE 301 (521)
T 3l8c_A 222 ELVADFKQLFTTIAQLPVGIWTSTPSFADMAMLSDDFCQAKMPALTHFYFDGEELTVSTARKLFERFPSAKIINAYGPTE 301 (521)
T ss_dssp GGTTCHHHHHHHHHHSCCSEEEECHHHHHHHHTSTTCSTTTCTTCCEEEECSSCCCHHHHHHHHHHCTTCEEEEEECCGG
T ss_pred HHhhCHHHHHHHHHHcCCcEEEeCCCHHHHHhhhhccccccCccceEEEEecccCCHHHHHHHHHHCCCceEEeCcCccH
Confidence 3 8999999999999999999999999998887777778899999999999999999999999999999999999999
Q ss_pred CCccccccccccCCccccCCCcccccccCCeEEEEeCCCCCCCCCCCceeEEEecCccccccccCCcceeeeee
Q 014952 339 AGPVLSMCLAFAKEPFEIKSGACGTVVRNAEMKIVDPDTGISLPRNQAGEICIRGAQIMKGTYHIYAPFLLSIV 412 (415)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~G~p~~~~~v~i~d~~~~~~~~~g~~Gel~v~~~~~~~gY~~~~~~~~~~~~ 412 (415)
++++++.+.............++|+|+|+++++|+| ++|++++.|+.|||+|+||+++.|||++|+++..+|+
T Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~vG~p~~~~~~~i~d-~~g~~~~~g~~GEl~v~g~~v~~GY~~~~~~t~~~f~ 374 (521)
T 3l8c_A 302 ATVALSAIEITREMVDNYTRLPIGYPKPDSPTYIID-EDGKELSSGEQGEIIVTGPAVSKGYLNNPEKTAEAFF 374 (521)
T ss_dssp GSSCSEEEEECHHHHHHCSSCEEEEECTTSCEEEEC-TTSCBCCTTCCEEEEEESTTSCSCBTTCHHHHHHHEE
T ss_pred HhhhhceeecccccccCCCccccccccCCCEEEEEC-CCcCCCCCCCceEEEecccccChhhcCCchHhhccCc
Confidence 997665542111111234567899999999999999 5599999999999999999999999999999998885
No 24
>1amu_A GRSA, gramicidin synthetase 1; peptide synthetase, adenylate forming; HET: PHE AMP; 1.90A {Brevibacillus brevis} SCOP: e.23.1.1
Probab=100.00 E-value=1.2e-56 Score=442.58 Aligned_cols=363 Identities=21% Similarity=0.295 Sum_probs=300.5
Q ss_pred CCCCCCCCHHhHHHhhhccCCCCcEEEeCCCCCeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHH
Q 014952 19 IYIPNHLPLHTYCFENISQFADRPCIINGPTGDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGAS 98 (415)
Q Consensus 19 ~~~~~~~tl~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~ 98 (415)
...|...|+.++|.++++++|+++|+++. ++++||+||.++++++|+.|+++|+++||+|+++++|++++++++|||+
T Consensus 33 ~~~~~~~~l~~~l~~~a~~~p~~~Al~~~--~~~~Ty~eL~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~~~~lA~~ 110 (563)
T 1amu_A 33 AEYPRDKTIHQLFEEQVSKRPNNVAIVCE--NEQLTYHELNVKANQLARIFIEKGIGKDTLVGIMMEKSIDLFIGILAVL 110 (563)
T ss_dssp CCCCTTCCHHHHHHHHHHHCTTSEEEEET--TEEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECCSSHHHHHHHHHHH
T ss_pred CCCCCCCcHHHHHHHHHHHCCCCeEEEeC--CceecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHHH
Confidence 34455689999999999999999999987 7899999999999999999999999999999999999999999999999
Q ss_pred HhCCeEeecCCCCCHHHHHHHHHhcCceEEEEcccchHHHHhhhhhcCceEEEeCCCCCCccchhhhhhhcccCCCCccc
Q 014952 99 YIGATSTTANPFYTPPEIAKQAIASKAKIIITQAVYNDKVRDLSEHHGARIVTIDPPPENCLHFSELITQADENEIPAVK 178 (415)
Q Consensus 99 ~~G~~~v~l~~~~~~~~~~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 178 (415)
++|++++|+++.++.+++.+++++++++++|++.+....+..... ...+..++... + . ..........
T Consensus 111 ~~Gav~vpl~~~~~~~~l~~il~~~~~~~li~~~~~~~~~~~~~~--~~~~~~~~~~~--------~-~-~~~~~~~~~~ 178 (563)
T 1amu_A 111 KAGGAYVPIDIEYPKERIQYILDDSQARMLLTQKHLVHLIHNIQF--NGQVEIFEEDT--------I-K-IREGTNLHVP 178 (563)
T ss_dssp HTTCEEEECCTTSCHHHHHHHHHHHTCSEEEECGGGHHHHTTSCC--CSEEEECCCST--------T-T-TSCCSCCCCC
T ss_pred HhCCEEEEeCCCCcHHHHHHHHHhcCCCEEEEcCchhhhhhhccc--cCceeeecchh--------h-c-cccCccCCCC
Confidence 999999999999999999999999999999999876655443211 12233332210 0 0 0111112234
Q ss_pred CCCCCeEEEecCCCCCCCCceeeechHHHHHHHhhhhcCCCCCccCCCCcEEEEccchHHHHhhHHHHHHHHHcCcEEEE
Q 014952 179 INPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILI 258 (415)
Q Consensus 179 ~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~l~~l~~G~~~v~ 258 (415)
..++++++|+|||||||.||||+++|+++.+....... .+.+.++|++++..|++|..++. .++.++..|+++++
T Consensus 179 ~~~~d~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~----~~~~~~~d~~l~~~p~~~~~~~~-~~~~~l~~G~~~v~ 253 (563)
T 1amu_A 179 SKSTDLAYVIYTSGTTGNPKGTMLEHKGISNLKVFFEN----SLNVTEKDRIGQFASISFDASVW-EMFMALLTGASLYI 253 (563)
T ss_dssp CCTTSEEEEEEEC-----CEEEEEESHHHHHHHHHHHH----TSCCCTTCEEEECSCTTSTHHHH-HHHHHHTTTCEEEE
T ss_pred CCCCCeEEEEECCCCCCCCcEEEEehHHHHHHHHHHHH----hcCCCCCCEEEEeCCccHHHHHH-HHHHHHHCCCEEEE
Confidence 56789999999999999999999999999988877766 44678999999999999998887 57889999999999
Q ss_pred cCC---CCHHHHHHHHHhcCceeeecchHHHHHHHcCCCCCCCCcccceeeeecCCCCCHHHHHHHHhhCCCCccccccc
Q 014952 259 MQK---FDIVKLMELVQKYKVTVAPFVPPIVLAVAKSGDVDKYDMSSIRTVMSGAAPMGKELEDAVRAKLPHAKLGQGYG 335 (415)
Q Consensus 259 ~~~---~~~~~~~~~l~~~~~t~l~~~p~~l~~l~~~~~~~~~~l~~lr~v~~gG~~l~~~~~~~~~~~~~~~~~~~~YG 335 (415)
.+. +++..+++.++++++|++.++|+++..+... .++++|.+++||+++++++.+++.+. .++++.||
T Consensus 254 ~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~------~~~~lr~~~~gG~~l~~~~~~~~~~~---~~~~~~YG 324 (563)
T 1amu_A 254 ILKDTINDFVKFEQYINQKEITVITLPPTYVVHLDPE------RILSIQTLITAGSATSPSLVNKWKEK---VTYINAYG 324 (563)
T ss_dssp CCHHHHTCHHHHHHHHHHTTCCEEEECHHHHTTSCTT------TCCSCSEEEEESSCCCHHHHHHHTTT---SEEEEEEC
T ss_pred cChHhhcCHHHHHHHHHHcCCcEEEeCHHHHHHHHhc------ccccccEEEEEEecCCHHHHHHHHhC---CeEEEEEC
Confidence 875 6899999999999999999999998777532 36889999999999999999999873 68999999
Q ss_pred cccCCccccccccccCCccccCCCcccccccCCeEEEEeCCCCCCCCCCCceeEEEecCccccccccCCcceeeeee
Q 014952 336 MTEAGPVLSMCLAFAKEPFEIKSGACGTVVRNAEMKIVDPDTGISLPRNQAGEICIRGAQIMKGTYHIYAPFLLSIV 412 (415)
Q Consensus 336 ~tE~~~~~~~~~~~~~~~~~~~~~~~G~p~~~~~v~i~d~~~~~~~~~g~~Gel~v~~~~~~~gY~~~~~~~~~~~~ 412 (415)
+||++.+++.+.. .........++|+|+|+++++|+| +++++++.|+.|||+|+||++++|||++|++|..+|.
T Consensus 325 ~TE~~~~~~~~~~--~~~~~~~~~~vG~p~~~~~v~i~d-~~~~~~~~g~~GEl~v~g~~v~~GY~~~pe~t~~~f~ 398 (563)
T 1amu_A 325 PTETTICATTWVA--TKETIGHSVPIGAPIQNTQIYIVD-ENLQLKSVGEAGELCIGGEGLARGYWKRPELTSQKFV 398 (563)
T ss_dssp CGGGSSCSEEEEC--CSSCCCSSCCCBEECTTEEEEEEC-TTSCBCCTTCEEEEEEEETTCCCEETTCHHHHHHHEE
T ss_pred cCHHhHhheeeec--ccccCCCCCcccceeCCCEEEEEC-CCcCCCCCCCcEEEEEechhhChhhCCCchhhhhhcc
Confidence 9999865554321 111223567899999999999999 5699999999999999999999999999999988885
No 25
>1ry2_A Acetyl-coenzyme A synthetase 1, acyl-activating enzyme 1; AMP forming, related to firefly luciferase, ligase; HET: AMP; 2.30A {Saccharomyces cerevisiae} SCOP: e.23.1.1
Probab=100.00 E-value=4.9e-56 Score=445.45 Aligned_cols=381 Identities=20% Similarity=0.296 Sum_probs=310.5
Q ss_pred CHHhHHHhhhccCCCCcEEEeCC----CCCeeeHHHHHHHHHHHHHHHH-HcCCCCCCEEEEEcCCchhHHHHHHHHHHh
Q 014952 26 PLHTYCFENISQFADRPCIINGP----TGDVYTYADVELTSRKVAAGLS-KLGVQKGDVIMLLLQNCPQFVFAFLGASYI 100 (415)
Q Consensus 26 tl~~~l~~~a~~~p~~~a~~~~~----~~~~~Ty~el~~~~~~~a~~L~-~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~ 100 (415)
++.++|.++++++|+++|+++.. .++++||+||.++++++|+.|+ ++|+++||+|+++++|++++++++|||+++
T Consensus 83 ~~~~~l~~~a~~~pd~~Al~~~~~~~~~~~~~TY~eL~~~v~~lA~~L~~~~Gv~~Gd~V~i~~~~~~e~v~a~lA~~~~ 162 (663)
T 1ry2_A 83 ACYNCVDRHALKTPNKKAIIFEGDEPGQGYSITYKELLEEVCQVAQVLTYSMGVRKGDTVAVYMPMVPEAIITLLAISRI 162 (663)
T ss_dssp HHHHHTHHHHTTCTTSEEEEEECSSTTCCEEEEHHHHHHHHHHHHHHHHHTSCCCTTCEEEECCCSSHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhccCCCceEEEEEcCCCCceEEEEHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCHHHHHHHHHHHHc
Confidence 35677778899999999999732 3578999999999999999999 899999999999999999999999999999
Q ss_pred CCeEeecCCCCCHHHHHHHHHhcCceEEEEcccch---------HHHHhhhhhc-C-ceEEEeCCCC--------CCccc
Q 014952 101 GATSTTANPFYTPPEIAKQAIASKAKIIITQAVYN---------DKVRDLSEHH-G-ARIVTIDPPP--------ENCLH 161 (415)
Q Consensus 101 G~~~v~l~~~~~~~~~~~~l~~~~~~~vl~~~~~~---------~~~~~~~~~~-~-~~~i~~~~~~--------~~~~~ 161 (415)
|++++|+++.++.+++.+++++++++++|+++... ..+....... . .+++.++... .....
T Consensus 163 Gav~vpl~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~ 242 (663)
T 1ry2_A 163 GAIHSVVFAGFSSNSLRDRINDGDSKVVITTDESNRGGKVIETKRIVDDALRETPGVRHVLVYRKTNNPSVAFHAPRDLD 242 (663)
T ss_dssp TCEEEECCTTSCHHHHHHHHHHHTCSEEEEESBCCBTTBCCBHHHHHHHHTTSCTTCCEEEEECSSCCSSCCCCSSSEEE
T ss_pred CCEEEeeCCCCCHHHHHHHHHhcCCeEEEEccccccCCcccchHHHHHHHHHhCCCCceEEEEecCCCCccccCCCcccc
Confidence 99999999999999999999999999999987642 2233332221 2 2455554321 11234
Q ss_pred hhhhhhhcccCCCCcccCCCCCeEEEecCCCCCCCCceeeechHHHHHHHhhhhcCCCCCccCCCCcEEEEccchHHHHh
Q 014952 162 FSELITQADENEIPAVKINPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYS 241 (415)
Q Consensus 162 ~~~l~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g 241 (415)
++++.. ......+.....++++++|+|||||||.||||+++|.++.......... .+.+.++|++++..|++|..+
T Consensus 243 ~~~~~~-~~~~~~~~~~~~~~d~a~ilyTSGTTG~PKgV~~sh~~~~~~~~~~~~~---~~~~~~~d~~~~~~~~~~~~g 318 (663)
T 1ry2_A 243 WATEKK-KYKTYYPCTPVDSEDPLFLLYTSGSTGAPKGVQHSTAGYLLGALLTMRY---TFDTHQEDVFFTAGDIGWITG 318 (663)
T ss_dssp HHHHHT-TSCSCCCCCCEETTSCCEEEEECCSSSSCEEEEECSHHHHHHHHHHHHH---HSCCCSSCEEEECSCTTSHHH
T ss_pred HHHHHh-hcCCCCCccccCCCCceEEEeccCCCCCCceEEEchhHHHHHHHHHHHH---hcCCCCCcEEEEcCCcHHhhh
Confidence 555522 2222233445677999999999999999999999999987665432221 345788999999999999999
Q ss_pred hHHHHHHHHHcCcEEEEcCC----CCHHHHHHHHHhcCceeeecchHHHHHHHcCCC--CCCCCcccceeeeecCCCCCH
Q 014952 242 LNSVLLCALRVGAAILIMQK----FDIVKLMELVQKYKVTVAPFVPPIVLAVAKSGD--VDKYDMSSIRTVMSGAAPMGK 315 (415)
Q Consensus 242 ~~~~~l~~l~~G~~~v~~~~----~~~~~~~~~l~~~~~t~l~~~p~~l~~l~~~~~--~~~~~l~~lr~v~~gG~~l~~ 315 (415)
....++.++..|+++++.+. +++..+++.++++++|+++++|++++.|.+... .+..++++||.+++||+++++
T Consensus 319 ~~~~~~~~L~~G~t~v~~~~~~~~~~~~~~~~~i~~~~vt~~~~~Ps~~~~l~~~~~~~~~~~~l~sLr~i~~gGe~l~~ 398 (663)
T 1ry2_A 319 HTYVVYGPLLYGCATLVFEGTPAYPNYSRYWDIIDEHKVTQFYVAPTALRLLKRAGDSYIENHSLKSLRCLGSVGEPIAA 398 (663)
T ss_dssp HHHTTHHHHHHTSEEEEECSCTTSSCTTHHHHHHHHTTCSEEEECHHHHHHHTTSCTTSSSSCCCTTCCEEEECSSCCCH
T ss_pred hHHHHHHHHHhCCEEEEECCCCCCCCHHHHHHHHHHcCCCEEEecHHHHHHHHhcCccccccCCcCceEEEEEEcCCCCH
Confidence 86567899999999999864 588999999999999999999999999988754 345678999999999999999
Q ss_pred HHHHHHHhhCC--CCccccccccccCCccccccccccCCccccCCCcccccccCCeEEEEeCCCCCCCCC-CCceeEEEe
Q 014952 316 ELEDAVRAKLP--HAKLGQGYGMTEAGPVLSMCLAFAKEPFEIKSGACGTVVRNAEMKIVDPDTGISLPR-NQAGEICIR 392 (415)
Q Consensus 316 ~~~~~~~~~~~--~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~G~p~~~~~v~i~d~~~~~~~~~-g~~Gel~v~ 392 (415)
++.+++.+.++ ++++++.||+||+++.++.... ......+++++|+|++|++++|+|+++|++++. |+.|||+|+
T Consensus 399 ~~~~~~~~~~g~~~~~i~~~YG~TE~~~~~~~~~~--~~~~~~~~gs~G~p~~g~~v~i~d~~~g~~v~~~g~~Gel~i~ 476 (663)
T 1ry2_A 399 EVWEWYSEKIGKNEIPIVDTYWQTESGSHLVTPLA--GGVTPMKPGSASFPFFGIDAVVLDPNTGEELNTSHAEGVLAVK 476 (663)
T ss_dssp HHHHHHHHTTSCSSSCEEECBCCTTTCSCSEECCT--TTCCCCCTTCCCEECTTCCEEEECSSSTTCEECSSCEEEEEES
T ss_pred HHHHHHHHHhCCCCceEEEeECCccccCeeeccCC--CCCcccCCCccccCcCCCeEEEEcCCCCCcCCCCCcceEEEEe
Confidence 99999999983 2889999999999875554311 011234678999999999999999757999988 999999999
Q ss_pred c--CccccccccCCcceeeeee
Q 014952 393 G--AQIMKGTYHIYAPFLLSIV 412 (415)
Q Consensus 393 ~--~~~~~gY~~~~~~~~~~~~ 412 (415)
| |++++|||++|+.|..+|+
T Consensus 477 g~~p~~~~gy~~~~~~~~~~~~ 498 (663)
T 1ry2_A 477 AAWPSFARTIWKNHDRYLDTYL 498 (663)
T ss_dssp SCCTTSCCEETTCHHHHHHHHT
T ss_pred cCCCchhcccccChHHHHHhhh
Confidence 9 5899999999999887765
No 26
>3kxw_A Saframycin MX1 synthetase B; fatty acid AMP ligase, SGX, acyl adenylate, structural genom 2, protein structure initiative; HET: 1ZZ; 1.85A {Legionella pneumophila subsp} PDB: 3lnv_A*
Probab=100.00 E-value=1.5e-56 Score=445.86 Aligned_cols=377 Identities=22% Similarity=0.296 Sum_probs=310.5
Q ss_pred CCCCCHHhHHHhhhccCCCCcEEEeCC--CCCeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHH
Q 014952 22 PNHLPLHTYCFENISQFADRPCIINGP--TGDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASY 99 (415)
Q Consensus 22 ~~~~tl~~~l~~~a~~~p~~~a~~~~~--~~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~ 99 (415)
++.+|+.+.|.++++++|+++|+++.+ .++++||+||.++++++|+.|+++|+++||+|+++++|++++++++|||++
T Consensus 8 ~~~~tl~~~l~~~a~~~p~~~a~~~~~~~~~~~~Ty~eL~~~~~~lA~~L~~~gv~~gd~V~i~~~~~~~~~~~~lA~~~ 87 (590)
T 3kxw_A 8 LQCQSLVDVVRLRALHSPNKKSCTFLNKELEETMTYEQLDQHAKAIAATLQAEGAKPGDRVLLLFAPGLPLIQAFLGCLY 87 (590)
T ss_dssp HTCSSHHHHHHHHHHHCTTSEEEEEEETTEEEEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECCSSHHHHHHHHHHHH
T ss_pred cCcccHHHHHHHHHHhCCCCeEEEEEcCCeeEEEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHH
Confidence 456899999999999999999998642 247999999999999999999999999999999999999999999999999
Q ss_pred hCCeEeecCCCCC---HHHHHHHHHhcCceEEEEcccchHHHHhhh-hhcC--ceEEEeCCCCCCccchhhhhhhcccCC
Q 014952 100 IGATSTTANPFYT---PPEIAKQAIASKAKIIITQAVYNDKVRDLS-EHHG--ARIVTIDPPPENCLHFSELITQADENE 173 (415)
Q Consensus 100 ~G~~~v~l~~~~~---~~~~~~~l~~~~~~~vl~~~~~~~~~~~~~-~~~~--~~~i~~~~~~~~~~~~~~l~~~~~~~~ 173 (415)
+|++++|++|.+. .+++.++++.+++.+++++.+....+.... .... ..+..+ ..+++ .......
T Consensus 88 ~G~~~vpl~~~~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~-~~~~~~~ 158 (590)
T 3kxw_A 88 AGCIAVPIYPPAQEKLLDKAQRIVTNSKPVIVLMIADHIKKFTADELNTNPKFLKIPAI--------ALESI-ELNRSSS 158 (590)
T ss_dssp TTCEEEEECCCCSHHHHHHHHHHHHHHCCSEEEECHHHHHHHCC-----CCEETTEEEE--------EGGGC-CGGGGGG
T ss_pred hCcEEEEecCCCchHHHHHHHHHHHhCCCCEEEeCHHHHHHHHHhhhhhccccccccee--------echhc-ccccccc
Confidence 9999999999874 478899999999999999987766554332 1111 011111 11111 1111112
Q ss_pred CCcccCCCCCeEEEecCCCCCCCCceeeechHHHHHHHhhhhcCCCCCccCCCCcEEEEccchHHHHhhHHHHHHHHHcC
Q 014952 174 IPAVKINPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVG 253 (415)
Q Consensus 174 ~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~l~~l~~G 253 (415)
.......++++++|+|||||||.||+|+++|+++.+.+..... .+.+.+++++++.+|++|.+++...++.++..|
T Consensus 159 ~~~~~~~~~d~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~----~~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G 234 (590)
T 3kxw_A 159 WQPTSIKSNDIAFLQYTSGSTMHPKGVMVSHHNLLDNLNKIFT----SFHMNDETIIFSWLPPHHDMGLIGCILTPIYGG 234 (590)
T ss_dssp CCCCCCCTTSEEEEEECSSCSSSCCEEEEEHHHHHHHHHHHHH----HTTCCTTCEEEECSCTTSHHHHHTTTHHHHHHT
T ss_pred CCCCCCCCCCeEEEEeCcCCCCCceEEEeeHHHHHHHHHHHHH----hhCCCCcCeEEEecCCCcchhhHHHHHHHHhcC
Confidence 2334567899999999999999999999999999999888777 456889999999999999999986688999999
Q ss_pred cEEEEcCCC----CHHHHHHHHHhcCceeeecchHHHHHHHcC---CCCCCCCcccceeeeecCCCCCHHHHHHHHhhCC
Q 014952 254 AAILIMQKF----DIVKLMELVQKYKVTVAPFVPPIVLAVAKS---GDVDKYDMSSIRTVMSGAAPMGKELEDAVRAKLP 326 (415)
Q Consensus 254 ~~~v~~~~~----~~~~~~~~l~~~~~t~l~~~p~~l~~l~~~---~~~~~~~l~~lr~v~~gG~~l~~~~~~~~~~~~~ 326 (415)
+++++.+++ ++..+++.++++++|++.++|.++..+.+. ......++++||.+++||+++++++.+++.+.|+
T Consensus 235 ~~~v~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~l~~lr~~~~gg~~l~~~~~~~~~~~~~ 314 (590)
T 3kxw_A 235 IQAIMMSPFSFLQNPLSWLKHITKYKATISGSPNFAYDYCVKRIREEKKEGLDLSSWVTAFNGAEPVREETMEHFYQAFK 314 (590)
T ss_dssp CEEEECCHHHHHHCTHHHHHHHHHHTCSEEEECTHHHHHHHHHCCGGGGTTCCCTTCCEEEECSSCCCHHHHHHHHHHHG
T ss_pred ceEEEeCHHHHHHCHHHHHHHHHHhCCeeecCChhHHHHHHHHhhhhhccCCCchhhHHHhhCCCCCCHHHHHHHHHHHH
Confidence 999998865 889999999999999999999999888765 2334567899999999999999999999999873
Q ss_pred -----CCccccccccccCCcccccccccc----------------------CCccccCCCcccccccCCeEEEEeCCCCC
Q 014952 327 -----HAKLGQGYGMTEAGPVLSMCLAFA----------------------KEPFEIKSGACGTVVRNAEMKIVDPDTGI 379 (415)
Q Consensus 327 -----~~~~~~~YG~tE~~~~~~~~~~~~----------------------~~~~~~~~~~~G~p~~~~~v~i~d~~~~~ 379 (415)
+.++++.||+||++++++...... .........++|+|+++ ++|+|+++++
T Consensus 315 ~~g~~~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~p~~~--v~i~d~~~~~ 392 (590)
T 3kxw_A 315 EFGFRKEAFYPCYGLAEATLLVTGGTPGSSYKTLTLAKEQFQDHRVHFADDNSPGSYKLVSSGNPIQE--VKIIDPDTLI 392 (590)
T ss_dssp GGTCCGGGEEEEEECGGGSSEEEECCTTSCCCEEEECSCCCSSSBCCBCCTTCTTCEEEECCCEESSE--EEEECTTTCC
T ss_pred HcCCCccccccccccccccceeecccCCCCceeeeecHHHHhcCceeeccCCCCCcceEeccCCCCCC--eEEEcCCCCc
Confidence 457999999999997665432110 01122345788999998 8999988899
Q ss_pred CCCCCCceeEEEecCccccccccCCcceeeeeee
Q 014952 380 SLPRNQAGEICIRGAQIMKGTYHIYAPFLLSIVC 413 (415)
Q Consensus 380 ~~~~g~~Gel~v~~~~~~~gY~~~~~~~~~~~~~ 413 (415)
+++.|+.|||+|+||+++.|||++|+.|..+|..
T Consensus 393 ~~~~g~~GEl~v~g~~v~~GY~~~p~~t~~~f~~ 426 (590)
T 3kxw_A 393 PCDFDQVGEIWVQSNSVAKGYWNQPEETRHAFAG 426 (590)
T ss_dssp BCCTTBCEEEEEESTTSCCCBTTCHHHHHHHHCB
T ss_pred CCCCCCEEEEEEeCCcccccccCChhHHHHHHhc
Confidence 9999999999999999999999999999888853
No 27
>3ipl_A 2-succinylbenzoate--COA ligase; structural genomics, acyl-protein synthetase, PSI-2, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=100.00 E-value=9.4e-55 Score=424.38 Aligned_cols=361 Identities=19% Similarity=0.299 Sum_probs=291.0
Q ss_pred CCHHhHHHhhhccCCCCcEEEeCCCCCeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHHhCCeE
Q 014952 25 LPLHTYCFENISQFADRPCIINGPTGDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGATS 104 (415)
Q Consensus 25 ~tl~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~ 104 (415)
|||.++|.++++++|+++|+++. ++++||+||.++++++|+.|+++ +||+|+++++|++++++++|||+++|+++
T Consensus 1 mtl~~~l~~~a~~~pd~~Al~~~--~~~~Ty~eL~~~~~~lA~~L~~~---~gd~V~i~~~n~~e~~~~~lA~~~~Gav~ 75 (501)
T 3ipl_A 1 MSLDFWLYKQAQQNGHHIAITDG--QESYTYQNLYCEASLLAKRLKAY---QQSRVGLYIDNSIQSIILIHACWLANIEI 75 (501)
T ss_dssp --CCCHHHHHHHHHTTSEEEECS--SCEEEHHHHHHHHHHHHHHHHTT---CCSEEEEECCSSHHHHHHHHHHHHTTCEE
T ss_pred CCHHHHHHHHHHhcCCceEEEeC--CcEEEHHHHHHHHHHHHHHHHHc---CCCEEEEEcCCCHHHHHHHHHHHHcCCEE
Confidence 57889999999999999999997 78999999999999999999986 89999999999999999999999999999
Q ss_pred eecCCCCCHHHHHHHHHhcCceEEEEcccchHHHHhhhhhcCceEEEeCCCCC------Ccc----chhhhhhhcccCCC
Q 014952 105 TTANPFYTPPEIAKQAIASKAKIIITQAVYNDKVRDLSEHHGARIVTIDPPPE------NCL----HFSELITQADENEI 174 (415)
Q Consensus 105 v~l~~~~~~~~~~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~i~~~~~~~------~~~----~~~~l~~~~~~~~~ 174 (415)
+|+++.++.+++.+++++++++++|++.+................+....... ... ..+...........
T Consensus 76 vpl~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (501)
T 3ipl_A 76 AMINTRLTPNEMTNQMRSIDVQLIFCTLPLELRGFQIVSLDDIEFAGRDITTNGLLDNTMGIQYDTSNETVVPKESPSNI 155 (501)
T ss_dssp EECCTTSCHHHHHHHHHHTTCCEEEESSCCCCTTSEEEETTC--------------------------------CCHHHH
T ss_pred EecCccCCHHHHHHHHHhcCCCEEEEccccccccccccccccceeeeeecccccccccccccccccchhhccccCCcccc
Confidence 99999999999999999999999999876544322111111111000000000 000 00011000000011
Q ss_pred CcccCCCCCeEEEecCCCCCCCCceeeechHHHHHHHhhhhcCCCCCccCCCCcEEEEccchHHHHhhHHHHHHHHHcCc
Q 014952 175 PAVKINPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGA 254 (415)
Q Consensus 175 ~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~l~~l~~G~ 254 (415)
......++++++|+|||||||.||+|.++|+++......... .+.+.+++++++.+|++|.+++.. ++.++..|+
T Consensus 156 ~~~~~~~~d~a~i~~TSGTTG~PKgv~~th~~~~~~~~~~~~----~~~~~~~d~~l~~~p~~~~~g~~~-~~~~l~~G~ 230 (501)
T 3ipl_A 156 LNTSFNLDDIASIMFTSGTTGPQKAVPQTFRNHYASAIGCKE----SLGFDRDTNWLSVLPIYHISGLSV-LLRAVIEGF 230 (501)
T ss_dssp TCCCCCTTSEEEEEECCTTTSCCCEEEEEHHHHHHHHHHHHH----HTCCCTTCEEEECSCTTSHHHHHH-HHHHHHHTC
T ss_pred cccCCCCCCeEEEEECCCCCCCCcEEEEeHHHHHHHHHHHHH----hhCCCccCEEEEeCcHHHHHHHHH-HHHHHHcCc
Confidence 223457799999999999999999999999999998887776 456889999999999999999984 888999999
Q ss_pred EEEEcCCCCHHHHHHHHHhcCceeeecchHHHHHHHcCCCCCCCCcccceeeeecCCCCCHHHHHHHHhhCCCCcccccc
Q 014952 255 AILIMQKFDIVKLMELVQKYKVTVAPFVPPIVLAVAKSGDVDKYDMSSIRTVMSGAAPMGKELEDAVRAKLPHAKLGQGY 334 (415)
Q Consensus 255 ~~v~~~~~~~~~~~~~l~~~~~t~l~~~p~~l~~l~~~~~~~~~~l~~lr~v~~gG~~l~~~~~~~~~~~~~~~~~~~~Y 334 (415)
++++.+++++..+++.++++++|++.++|+++..|.+...... .+||.+++||+++++++.+++.+ + ++++++.|
T Consensus 231 ~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~---~~lr~i~~gG~~l~~~~~~~~~~-~-~~~~~~~Y 305 (501)
T 3ipl_A 231 TVRIVDKFNAEQILTMIKNERITHISLVPQTLNWLMQQGLHEP---YNLQKILLGGAKLSATMIETALQ-Y-NLPIYNSF 305 (501)
T ss_dssp EEEECSSCCHHHHHHHHHHSCCCEEEECHHHHHHHHHHTCCSC---TTCCEEEECSSCCCHHHHHHHHH-T-TCCEEEEE
T ss_pred eEEeCCCCCHHHHHHHHHHcCCcEEEchHHHHHHHHhcCCCCc---CcccEEEEeCCCCCHHHHHHHHH-h-CCCEeccc
Confidence 9999999999999999999999999999999999988765443 28999999999999999999987 4 89999999
Q ss_pred ccccCCccccccccccCCccccCCCcccccccCCeEEEEeCCCCCCCCCCCceeEEEecCccccccccCCcceee
Q 014952 335 GMTEAGPVLSMCLAFAKEPFEIKSGACGTVVRNAEMKIVDPDTGISLPRNQAGEICIRGAQIMKGTYHIYAPFLL 409 (415)
Q Consensus 335 G~tE~~~~~~~~~~~~~~~~~~~~~~~G~p~~~~~v~i~d~~~~~~~~~g~~Gel~v~~~~~~~gY~~~~~~~~~ 409 (415)
|+||+++.+..+. ........+++|+|+++++++|+|++ .|+.|||+|+|+.+++|||++|+.+..
T Consensus 306 G~TE~~~~~~~~~---~~~~~~~~~~~G~p~~~~~~~i~d~~------~~~~GEl~v~g~~~~~gY~~~~~~t~~ 371 (501)
T 3ipl_A 306 GMTETCSQFLTAT---PEMLHARPDTVGMPSANVDVKIKNPN------KEGHGELMIKGANVMNGYLYPTDLTGT 371 (501)
T ss_dssp EEGGGTEEEEEEC---HHHHHHCTTCCBEECTTCEEEEESCC------SSCCEEEEEESTTSCSCCSBSTTCCCS
T ss_pred cccccccceeecC---ccccccCCCCCCCCCCCcEEEEecCC------CCCccEEEEeccchhhhhCcChhhcch
Confidence 9999986544431 11123467889999999999999965 467899999999999999999998865
No 28
>3gqw_A Fatty acid AMP ligase; FAAL, E. coli, ATP-dependent binding enzyme family,, structural genomics, PSI-2, protein structure initiative; HET: ZZ9; 3.00A {Escherichia coli O6} PDB: 3pbk_A*
Probab=100.00 E-value=6.8e-54 Score=425.82 Aligned_cols=377 Identities=18% Similarity=0.263 Sum_probs=310.2
Q ss_pred CCCCCCCCCHHhHHHhhhccCCCCcEEEeCCC-CCeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHH
Q 014952 18 DIYIPNHLPLHTYCFENISQFADRPCIINGPT-GDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLG 96 (415)
Q Consensus 18 ~~~~~~~~tl~~~l~~~a~~~p~~~a~~~~~~-~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA 96 (415)
+...++..|+.++|.++++++|+.+++.+... ++++||+||.++++++|+.|+++|+++||+|+++++|+.++++++||
T Consensus 14 ~~~~~~~~tl~~~l~~~a~~~p~~~~~~~~~~~~~~~Ty~eL~~~~~~lA~~L~~~Gv~~gd~V~i~~~~~~~~~~~~lA 93 (576)
T 3gqw_A 14 PMRYADFPTLVDALDYAALSSAGMNFYDRRCQLEDQLEYQTLKARAEAGAKRLLSLNLKKGDRVALIAETSSEFVEAFFA 93 (576)
T ss_dssp CCCCSCCSSHHHHHHHHTTSSCEEEEECTTSCEEEEEEHHHHHHHHHHHHHHHHHTCCCTTCEEEEECCSSHHHHHHHHH
T ss_pred CcccCCCCcHHHHHHHHhhCCCCeEEeCCCCCceeEEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHH
Confidence 34445678999999999999999888765422 47999999999999999999999999999999999999999999999
Q ss_pred HHHhCCeEeecCCCCC-------HHHHHHHHHhcCceEEEEcccchHHHHhhhhhcCc-eEEEeCCCCCCccchhhhhhh
Q 014952 97 ASYIGATSTTANPFYT-------PPEIAKQAIASKAKIIITQAVYNDKVRDLSEHHGA-RIVTIDPPPENCLHFSELITQ 168 (415)
Q Consensus 97 ~~~~G~~~v~l~~~~~-------~~~~~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~-~~i~~~~~~~~~~~~~~l~~~ 168 (415)
|+++|++++|+++.++ .+++.++++++++++++++.+....+......... .++.. ... ..
T Consensus 94 ~~~~G~~~vpl~~~~~~~~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~----------~~~-~~ 162 (576)
T 3gqw_A 94 CQYAGLVAVPLAIPMGVGQRDSWSAKLQGLLASCQPAAIITGDEWLPLVNAATHDNPELHVLSH----------AWF-KA 162 (576)
T ss_dssp HHHTTCEEEEECCCSSSSSHHHHHHHHHHHHHHHCCSEEEECGGGHHHHHHHGGGCTTCEEEEH----------HHH-HT
T ss_pred HHHhCCeEeecCCCCcccchhhHHHHHHHHHHhcCCCEEEecHHHHHHHHHhhccCCcceecch----------hhh-hc
Confidence 9999999999999998 78999999999999999999887776665433322 22211 111 11
Q ss_pred cccCCCCcccCCCCCeEEEecCCCCCCCCceeeechHHHHHHHhhhhcCCCCCccCCCCcEEEEccchHHHHhhHHHHHH
Q 014952 169 ADENEIPAVKINPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLC 248 (415)
Q Consensus 169 ~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~l~ 248 (415)
............++++++|+|||||||.||+|+++|+++..+....... .+.+.+++++++.+|++|.+++...++.
T Consensus 163 ~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~~~~~~~~~~~~---~~~~~~~d~~l~~~p~~h~~g~~~~~~~ 239 (576)
T 3gqw_A 163 LPEADVALQRPVPNDIAYLQYTSGSTRFPRGVIITHREVMANLRAISHD---GIKLRPGDRCVSWLPFYHDMGLVGFLLT 239 (576)
T ss_dssp SCCCCCCCCCCCTTSEEEEECTTSCSSSCCCEEEEHHHHHHHHHHHHHT---TSCCCTTCCEEECCCTTSHHHHHHHTHH
T ss_pred ccccccccCCCCCCCeEEEEeCCCCCCCCceEEeeHHHHHHHHHHhhhc---ccCCCCcceEEEcCCccccccHHHHHHH
Confidence 1222233344568999999999999999999999999999888776542 2467899999999999999999877788
Q ss_pred HHHcCcEEEEcCC----CCHHHHHHHHHhcCceeeecchHHHHHHHcCCC---CCCCCcccceeeeecCCCCCHHHHHHH
Q 014952 249 ALRVGAAILIMQK----FDIVKLMELVQKYKVTVAPFVPPIVLAVAKSGD---VDKYDMSSIRTVMSGAAPMGKELEDAV 321 (415)
Q Consensus 249 ~l~~G~~~v~~~~----~~~~~~~~~l~~~~~t~l~~~p~~l~~l~~~~~---~~~~~l~~lr~v~~gG~~l~~~~~~~~ 321 (415)
++..|+++++.+. +++..+++.++++++|++.++|.++..+.+... ....+++++|.+.+||++++.++.+++
T Consensus 240 ~l~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~l~~lr~~~~gg~~l~~~~~~~~ 319 (576)
T 3gqw_A 240 PVATQLSVDYLRTQDFAMRPLQWLKLISKNRGTVSVAPPFGYELCQRRVNEKDLAELDLSCWRVAGIGAEPISAEQLHQF 319 (576)
T ss_dssp HHHTTCCEEECCHHHHHHCTTHHHHHHHHTTCCEEEECHHHHHHHHHSCCHHHHTTCCCTTCCEEEECSSCCCHHHHHHH
T ss_pred HHhcCceEEEcchhHhhhCHHHHHHHHHHhCCeEEEcCHHHHHHHHHHhcccccccCChhhhHhhhccCccCCHHHHHHH
Confidence 8999999998864 588999999999999999999999987766533 235668999999999999999999999
Q ss_pred HhhCC-----CCccccccccccCCccccccccccCC-----------------------ccccCCCcccccccCCeEEEE
Q 014952 322 RAKLP-----HAKLGQGYGMTEAGPVLSMCLAFAKE-----------------------PFEIKSGACGTVVRNAEMKIV 373 (415)
Q Consensus 322 ~~~~~-----~~~~~~~YG~tE~~~~~~~~~~~~~~-----------------------~~~~~~~~~G~p~~~~~v~i~ 373 (415)
.+.|+ +.++++.||+||++.+++.+...... .......++|+|+|+++++|+
T Consensus 320 ~~~~~~~~~~~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~ 399 (576)
T 3gqw_A 320 AECFRQVNFDNKTFMPCYGLAENALAVSFSDEASGVVVNEVDRDILEYQGKAVAPGAETRAVSTFVNCGKALPEHGIEIR 399 (576)
T ss_dssp HHHHGGGTCCGGGEEEEEECGGGSSEEEECCTTCCCCEEEEEHHHHHHHCBCCCCCTTCCCEEEEEBCCEECTTCEEEEE
T ss_pred HHHHhhcCCCcccccccCCcccccceeecccccCCccccccchhhhcccCcccccCccccCccceeecCCcCCCCeEEEE
Confidence 99875 67899999999999776654211000 000112379999999999999
Q ss_pred eCCCCCCCCCCCceeEEEecCccccccccCCcceee
Q 014952 374 DPDTGISLPRNQAGEICIRGAQIMKGTYHIYAPFLL 409 (415)
Q Consensus 374 d~~~~~~~~~g~~Gel~v~~~~~~~gY~~~~~~~~~ 409 (415)
| ++|++++.|+.|||+|+||.+++|||++|+.+..
T Consensus 400 d-~~g~~~~~g~~GEl~v~g~~~~~gY~~~~~~~~~ 434 (576)
T 3gqw_A 400 N-EAGMPVAERVVGHICISGPSLMSGYFGDQVSQDE 434 (576)
T ss_dssp C-TTSCBCCTTBCEEEEEESTTSCCCBTTCHHHHHH
T ss_pred C-CCCCCCCCCCeEEEEEeCccccccccCCcccccc
Confidence 9 7799999999999999999999999999987654
No 29
>3ite_A SIDN siderophore synthetase; ligase, non-ribosomal peptide synthesis, NRPS, sidna3, fungal, endophyte; HET: MSE; 2.00A {Neotyphodium lolii}
Probab=100.00 E-value=5e-53 Score=417.82 Aligned_cols=370 Identities=16% Similarity=0.135 Sum_probs=296.1
Q ss_pred CCCCCHHhHHHhhhccCCCCcEEEeCCC--------CCeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHH
Q 014952 22 PNHLPLHTYCFENISQFADRPCIINGPT--------GDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFA 93 (415)
Q Consensus 22 ~~~~tl~~~l~~~a~~~p~~~a~~~~~~--------~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~ 93 (415)
++.+|+.++|.++++++|+++|+++.+. .+++||+||.++++++|+.|++.|+ +||+|+++++|+++++++
T Consensus 17 ~~~~tl~~~l~~~a~~~p~~~A~~~~~~~~~~~~~~~~~~Ty~eL~~~~~~lA~~L~~~g~-~gd~V~i~~~n~~~~~~~ 95 (562)
T 3ite_A 17 TSTVPPSHYIETWAKTHPEWKAVEVATGFLGSQKIVTEDWTYKKLNETANQVANLIIHASL-HGRAIAVSLDRSLIAFAI 95 (562)
T ss_dssp -CCCCTTHHHHHHHHHCTTSEEEEEEECC-----CEEEEEEHHHHHHHHHHHHHHHHHTTC-SSCEEEEECCSCHHHHHH
T ss_pred cccCCHHHHHHHHHHHCCCchhhhcccccccccccccCCCCHHHHHHHHHHHHHHHHhcCC-CCCEEEEEeCCCHHHHHH
Confidence 4579999999999999999999986521 2789999999999999999999999 799999999999999999
Q ss_pred HHHHHHhCCeEeecCCCCCHHHHHHHHHhcCceEEEEcccchHHHHhhhhhcCceEEEeCCCCCCccchhhhhhhcccCC
Q 014952 94 FLGASYIGATSTTANPFYTPPEIAKQAIASKAKIIITQAVYNDKVRDLSEHHGARIVTIDPPPENCLHFSELITQADENE 173 (415)
Q Consensus 94 ~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~ 173 (415)
+|||+++|++++|+++.++.+++.+++++++++++|++.+....... .....++..+. ..+.+. .......
T Consensus 96 ~lA~~~~Gav~vpl~~~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~---~~~~~~~~~~~-----~~~~~~-~~~~~~~ 166 (562)
T 3ite_A 96 IVGIMKSGNTYVPIEAGLPNDRKSFLLRDSRAAMAFVCDNNFDGVEL---PPETKVLDTKN-----QSFIEN-LSTQDTS 166 (562)
T ss_dssp HHHHHHTTCEEEECCTTSCHHHHHHHHHHHTCSEEEECTTTTTTCCC---CTTCEEEETTC-----HHHHHH-HHHSCCS
T ss_pred HHHHHHhCCEEEecCCcCHHHHHHHHHHhcCCCEEEEcccccccccc---Cccceeecccc-----hhhhhh-ccccccc
Confidence 99999999999999999999999999999999999998764332110 01122222211 112222 1111222
Q ss_pred CCcccCCCCCeEEEecCCCCCCCCceeeechHHHHHHHhhhhcCC----CCCccCCCCcEEEEccchHHHHhhHHHHHHH
Q 014952 174 IPAVKINPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGE----NPNLYLHKEDVILCVLPLFHIYSLNSVLLCA 249 (415)
Q Consensus 174 ~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~----~~~~~~~~~~~~~~~~pl~~~~g~~~~~l~~ 249 (415)
.......++++++|+|||||||.||+|+++|+++.+......... ...+.+...+++++..|++|..++. .++.+
T Consensus 167 ~~~~~~~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 245 (562)
T 3ite_A 167 DILNNYPENLDAYLLYTSGSTGTPKGVRVSRHNLSSFSDAWGKLIGNVAPKSLELGGVGKFLCLASRAFDVHIG-EMFLA 245 (562)
T ss_dssp CCCCCCCTTSEEEEEEECC---CCEEEEEEHHHHHHHHHHHHHHHHHHCGGGGGCTTTCEEECCSCTTSTHHHH-HHHHH
T ss_pred ccccCCCCCCcEEEEECCCCCCCCcEEEECchhHHHHHHHHHhhhccccchhcccCcCceEEEecCchhhhhHH-HHHHH
Confidence 223345578899999999999999999999999988766543310 0123467789999999999988876 47889
Q ss_pred HHcCcEEEEcCCC-CHHHHHHHHHhcCceeeecchHHHHHHHcCCCCCCCCcccceeeeecCCCCCHHHHHHHHhhCCCC
Q 014952 250 LRVGAAILIMQKF-DIVKLMELVQKYKVTVAPFVPPIVLAVAKSGDVDKYDMSSIRTVMSGAAPMGKELEDAVRAKLPHA 328 (415)
Q Consensus 250 l~~G~~~v~~~~~-~~~~~~~~l~~~~~t~l~~~p~~l~~l~~~~~~~~~~l~~lr~v~~gG~~l~~~~~~~~~~~~~~~ 328 (415)
+..|+++++.+.+ .+..+.+.++++++|++.++|+++..+... ..++++||.+++||+++++++.+++.+.+ ++
T Consensus 246 l~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~l~~~~~~----~~~~~~lr~~~~gG~~l~~~~~~~~~~~~-~~ 320 (562)
T 3ite_A 246 WRFGLCAVTGERLSMLDDLPRTFRELGVTHAGIVPSLLDQTGLV----PEDAPHLVYLGVGGEKMTPRTQQIWSSSD-RV 320 (562)
T ss_dssp HHTTCEEEECCHHHHHHSHHHHHHHTTCCEEEECHHHHHHHTCC----GGGSTTCCEEEEESSCCCHHHHHHHTTCS-SC
T ss_pred HhcccEEEecchhhCHHHHHHHHHHcCCCEEEcCHHHHhhcccC----ccccCceEEEEEecCCCCHHHHHHHhhCC-Cc
Confidence 9999999998754 356788999999999999999998877443 34678999999999999999999999887 89
Q ss_pred ccccccccccCCccccccccccCCccccCCCcccccccCCeEEEEeCCCCCCCCCCCceeEEEecCccccccccCCccee
Q 014952 329 KLGQGYGMTEAGPVLSMCLAFAKEPFEIKSGACGTVVRNAEMKIVDPDTGISLPRNQAGEICIRGAQIMKGTYHIYAPFL 408 (415)
Q Consensus 329 ~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~G~p~~~~~v~i~d~~~~~~~~~g~~Gel~v~~~~~~~gY~~~~~~~~ 408 (415)
++++.||+||++..++... .......+++|+|+++++++|+|++++++++.|+.|||+|+||+++.|||++|+++.
T Consensus 321 ~~~~~YG~TE~~~~~~~~~----~~~~~~~~~~G~p~~~~~~~i~d~~~~~~~~~g~~GEl~v~g~~v~~GY~~~p~~t~ 396 (562)
T 3ite_A 321 ALVNVYGPTEVTIGCSAGR----ILPDSDTRCIGHPLGDSVAHVLAPGSNEHVKKGMAGELVIEGSLVANGYLNRPDAKG 396 (562)
T ss_dssp EEEEEECCGGGCSCSEEEE----CCTTSCTTEEEEECTTCEEEEECTTSSCBCCTTSCEEEEEESTTSCCEESSCTTCCS
T ss_pred EEEEeeccchheeeeeeee----ecCCCCCccccccCCCCeEEEEeCCCCCCCCCCCceEEEEeccccchhhCCCccccc
Confidence 9999999999986655432 122345678999999999999998889999999999999999999999999999987
Q ss_pred eee
Q 014952 409 LSI 411 (415)
Q Consensus 409 ~~~ 411 (415)
..|
T Consensus 397 ~~~ 399 (562)
T 3ite_A 397 FCD 399 (562)
T ss_dssp EEE
T ss_pred ccc
Confidence 654
No 30
>2vsq_A Surfactin synthetase subunit 3; ligase, peptidyl carrier protein, ligase phosphoprotein, TER module, phosphopantetheine; 2.60A {Bacillus subtilis}
Probab=100.00 E-value=3.7e-53 Score=454.01 Aligned_cols=364 Identities=22% Similarity=0.317 Sum_probs=306.5
Q ss_pred CCCHHhHHHhhhccCCCCcEEEeCCCCCeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHHhCCe
Q 014952 24 HLPLHTYCFENISQFADRPCIINGPTGDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGAT 103 (415)
Q Consensus 24 ~~tl~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~ 103 (415)
..++++.|.++++++|+++|+++. ++++||+||.++++++|+.|+++|+++|++|+|+++|+.++++++|||+++|++
T Consensus 463 ~~~l~~~~~~~~~~~p~~~Av~~~--~~~lTY~eL~~~a~~lA~~L~~~Gv~~g~~V~i~~~~s~~~vv~~lailkaG~~ 540 (1304)
T 2vsq_A 463 TKPLTYWFKEAVNANPDAPALTYS--GQTLSYRELDEEANRIARRLQKHGAGKGSVVALYTKRSLELVIGILGVLKAGAA 540 (1304)
T ss_dssp CCCHHHHHHHHHHHCTTSEEEESS--SCEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEECCCSSHHHHHHHHHHHHTTCE
T ss_pred CCCHHHHHHHHHHhCCCCeEEEEC--CeeEcHHHHHHHHHHHHHHHHhcCcCCcCEEEEEeCCCHHHHHHHHHHHHHCCE
Confidence 378999999999999999999987 889999999999999999999999999999999999999999999999999999
Q ss_pred EeecCCCCCHHHHHHHHHhcCceEEEEcccchHHHHhhhhhcCceEEEeCCCCCCccchhhhhhhcccCCCCcccCCCCC
Q 014952 104 STTANPFYTPPEIAKQAIASKAKIIITQAVYNDKVRDLSEHHGARIVTIDPPPENCLHFSELITQADENEIPAVKINPDD 183 (415)
Q Consensus 104 ~v~l~~~~~~~~~~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 183 (415)
++|++|.++.+++.++++++++++++++.+....+.... .....+.+++. ... ......+.....+++
T Consensus 541 ~vpldp~~p~~rl~~il~~~~~~~vl~~~~~~~~~~~~~--~~~~~~~~~~~-------~~~---~~~~~~~~~~~~~~~ 608 (1304)
T 2vsq_A 541 YLPVDPKLPEDRISYMLADSAAACLLTHQEMKEQAAELP--YTGTTLFIDDQ-------TRF---EEQASDPATAIDPND 608 (1304)
T ss_dssp EEECCTTSCHHHHHHHHHHHTCCEEEECSTTCTTSTTCC--CCSEEEESSCG-------GGG---GSCSSCCCCCCCTTS
T ss_pred EEEECCCCHHHHHHHHHHHcCCCEEEECcchhhhhhccC--CCCcEEEeccc-------ccc---ccccCCCCCCCCCCC
Confidence 999999999999999999999999999876544322110 01223333321 001 111122233457899
Q ss_pred eEEEecCCCCCCCCceeeechHHHHHHHhhhhcCCCCCccCCCCcEEEEccchHHHHhhHHHHHHHHHcCcEEEEcCC--
Q 014952 184 VVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIMQK-- 261 (415)
Q Consensus 184 ~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~l~~l~~G~~~v~~~~-- 261 (415)
+++|+|||||||.||||+++|+++.+. .+... .+.+.++++++...|++|..+.+ .++.++..|+++++.+.
T Consensus 609 ~ayiiyTSGSTG~PKgV~~~h~~l~~~-~~~~~----~~~~~~~d~~l~~~~~~fd~~~~-~~~~~l~~G~~l~~~~~~~ 682 (1304)
T 2vsq_A 609 PAYIMYTSGTTGKPKGNITTHANIQGL-VKHVD----YMAFSDQDTFLSVSNYAFDAFTF-DFYASMLNAARLIIADEHT 682 (1304)
T ss_dssp EEEEEEECCSSSSCEEEEEEHHHHHHH-HSSCC----SSCCCTTCEEEECSCTTSTHHHH-HHHHHHTTTCEEEECCGGG
T ss_pred eEEEEeCCCCCCCCCEEEEehHHHHHH-HHHHH----hcCCCCCCEEEEECCccHHHHHH-HHHHHHHcCCEEEECChhh
Confidence 999999999999999999999999865 33333 55688999999999999988876 58899999999999874
Q ss_pred -CCHHHHHHHHHhcCceeeecchHHHHHHHcCCCCCCCCcccceeeeecCCCCCHHHHHHHHhhCCCCccccccccccCC
Q 014952 262 -FDIVKLMELVQKYKVTVAPFVPPIVLAVAKSGDVDKYDMSSIRTVMSGAAPMGKELEDAVRAKLPHAKLGQGYGMTEAG 340 (415)
Q Consensus 262 -~~~~~~~~~l~~~~~t~l~~~p~~l~~l~~~~~~~~~~l~~lr~v~~gG~~l~~~~~~~~~~~~~~~~~~~~YG~tE~~ 340 (415)
.++..+.+.++++++|++.++|+++..+.+.. ...+++||.+++||++++.++.+++.+.+++.++++.||+||++
T Consensus 683 ~~~~~~l~~~i~~~~vt~~~~~p~~~~~l~~~~---~~~~~~lr~~~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~ 759 (1304)
T 2vsq_A 683 LLDTERLTDLILQENVNVMFATTALFNLLTDAG---EDWMKGLRCILFGGERASVPHVRKALRIMGPGKLINCYGPTEGT 759 (1304)
T ss_dssp TTCHHHHHHHHHHHTCCEEEEEHHHHHHHHHHC---SHHHHTCSEEEEESSCCCHHHHHHHHHHHCTTCEEEEECCGGGS
T ss_pred cCCHHHHHHHHHHcCCcEEEccHHHHHHHHhhc---hhcCCCccEEEEecCCCCHHHHHHHHHhCCCCEEEEeEChhHHh
Confidence 68999999999999999999999999997653 22468999999999999999999999998778999999999999
Q ss_pred ccccccccccCCccccCCCcccccccCCeEEEEeCCCCCCCCCCCceeEEEecCccccccccCCcceeeeee
Q 014952 341 PVLSMCLAFAKEPFEIKSGACGTVVRNAEMKIVDPDTGISLPRNQAGEICIRGAQIMKGTYHIYAPFLLSIV 412 (415)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~G~p~~~~~v~i~d~~~~~~~~~g~~Gel~v~~~~~~~gY~~~~~~~~~~~~ 412 (415)
..++.... ...+......++|+|+++++++|+| ++++++|.|+.|||+|+|+++++||+|+|+.|..+|+
T Consensus 760 ~~~~~~~~-~~~~~~~~~~~iG~p~~~~~~~i~d-~~~~~~p~G~~GEl~i~G~~v~~GY~~~p~~T~~~f~ 829 (1304)
T 2vsq_A 760 VFATAHVV-HDLPDSISSLPIGKPISNASVYILN-EQSQLQPFGAVGELCISGMGVSKGYVNRADLTKEKFI 829 (1304)
T ss_dssp SCSEEEEC-CCCCSSCSSCCCBEECTTEEEEEEC-TTSCBCCTTCCEEEEEEETTCCCCBTTCHHHHHHHEE
T ss_pred HHheeeec-cCccccCCCCCCceeeCCCEEEEEC-CCcCCCCCCCceEEEEeccccCccccCCcccchhhhc
Confidence 76554321 1112234557899999999999999 5599999999999999999999999999999999986
No 31
>3nyq_A Malonyl-COA ligase; A/B topology ababa sandwich beta-barrel adenylate-forming EN fold; HET: MCA AMP; 1.43A {Streptomyces coelicolor} PDB: 3nyr_A*
Probab=100.00 E-value=2.3e-54 Score=421.17 Aligned_cols=352 Identities=20% Similarity=0.265 Sum_probs=290.9
Q ss_pred CCCHHhHHHhhhccCCC-CcEEEeCCCCCeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHHhCC
Q 014952 24 HLPLHTYCFENISQFAD-RPCIINGPTGDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGA 102 (415)
Q Consensus 24 ~~tl~~~l~~~a~~~p~-~~a~~~~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~ 102 (415)
-.|+.+.|.++++++|+ ++|+++. ++++||+||.++++++|+.|. .|++|+++++|++++++++|||+++|+
T Consensus 21 ~~tl~~~l~~~a~~~p~d~~Al~~~--~~~~Ty~eL~~~~~~~A~~L~-----~~~~V~i~~~~~~~~~~~~la~~~~Ga 93 (505)
T 3nyq_A 21 MSSLFPALSPAPTGAPADRPALRFG--ERSLTYAELAAAAGATAGRIG-----GAGRVAVWATPAMETGVAVVAALLAGV 93 (505)
T ss_dssp ---CCTTTSSCCCSGGGGSEEEEET--TEEEEHHHHHHHHHHHHTTCC--------CEEEECCSSHHHHHHHHHHHHHTC
T ss_pred cchhHHHHHHHHHhCCCCCeEEEEC--CeeeeHHHHHHHHHHHHhhcc-----CCCEEEEEcCCCHHHHHHHHHHHHhCC
Confidence 57899999999999997 9999997 899999999999999999885 388999999999999999999999999
Q ss_pred eEeecCCCCCHHHHHHHHHhcCceEEEEcccchHHHHhhhhhcCceEEEeCCCCCCccchhhhhhhcccCCCCcccCCCC
Q 014952 103 TSTTANPFYTPPEIAKQAIASKAKIIITQAVYNDKVRDLSEHHGARIVTIDPPPENCLHFSELITQADENEIPAVKINPD 182 (415)
Q Consensus 103 ~~v~l~~~~~~~~~~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 182 (415)
+++|++|.++.+++.+++++++++++|++.+.... . .......+.++.. .....+.....++
T Consensus 94 ~~vpl~~~~~~~~l~~il~~~~~~~vi~~~~~~~~--~--~~~~~~~~~~~~~--------------~~~~~~~~~~~~~ 155 (505)
T 3nyq_A 94 AAVPLNPKSGDKELAHILSDSAPSLVLAPPDAELP--P--ALGALERVDVDVR--------------ARGAVPEDGADDG 155 (505)
T ss_dssp CEEEECTTCCHHHHHHHHHHHCCSEEEECTTCCCC--G--GGTTSEEEECCTT--------------CCCCCCCCCCCTT
T ss_pred EEEEcCCCCCHHHHHHHHHHCCCCEEEECCccccc--h--hhccccccccccc--------------cccCCCCCCCCCC
Confidence 99999999999999999999999999998652110 0 0112233333211 1111223445678
Q ss_pred CeEEEecCCCCCCCCceeeechHHHHHHHhhhhcCCCCCccCCCCcEEEEccchHHHHhhHHHHHHHHHcCcEEEEcCCC
Q 014952 183 DVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIMQKF 262 (415)
Q Consensus 183 ~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~l~~l~~G~~~v~~~~~ 262 (415)
++++|+|||||||.||+|+++|+++.+....... .+.+.+++++++.+|++|..++...++.++..|+++++.+.+
T Consensus 156 d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~----~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~ 231 (505)
T 3nyq_A 156 DPALVVYTSGTTGPPKGAVIPRRALATTLDALAD----AWQWTGEDVLVQGLPLFHVHGLVLGILGPLRRGGSVRHLGRF 231 (505)
T ss_dssp SEEEEEEECCSSSSCEEEEEEHHHHHHHHHHHHH----HHTCCTTCEEEECCCTTSHHHHTTTTHHHHHHTCEEEECSSC
T ss_pred CeEEEEeCCCCcCCCCeEEEeHHHHHHHHHHHHH----HhCCCCCcEEEEeccHHHHHHHHHHHHHHHhcCCEEEECCCC
Confidence 9999999999999999999999999998888776 456889999999999999999876789999999999999999
Q ss_pred CHHHHHHHHHhcCceeeecchHHHHHHHcCCCC---CCCCcccceeeeecCCCCCHHHHHHHHhhCCCCccccccccccC
Q 014952 263 DIVKLMELVQKYKVTVAPFVPPIVLAVAKSGDV---DKYDMSSIRTVMSGAAPMGKELEDAVRAKLPHAKLGQGYGMTEA 339 (415)
Q Consensus 263 ~~~~~~~~l~~~~~t~l~~~p~~l~~l~~~~~~---~~~~l~~lr~v~~gG~~l~~~~~~~~~~~~~~~~~~~~YG~tE~ 339 (415)
++..+++.+ ++++|+++++|+++..+.+.... ....++++|.+++||++++.++.+++.+.+ +.++++.||+||+
T Consensus 232 ~~~~~~~~i-~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~l~~lr~i~~gg~~l~~~~~~~~~~~~-~~~~~~~YG~TE~ 309 (505)
T 3nyq_A 232 STEGAAREL-NDGATMLFGVPTMYHRIAETLPADPELAKALAGARLLVSGSAALPVHDHERIAAAT-GRRVIERYGMTET 309 (505)
T ss_dssp CHHHHHHHH-TTTCCEEEECHHHHHHHHHHGGGCHHHHHHHHHCSEEEECSSCCCHHHHHHHHHHH-SCCCEEEEEETTT
T ss_pred ChHHHHHHH-hhCCeEEEehHHHHHHHHHhhhcCchhhcccccceEEEECCCCCCHHHHHHHHHhc-CCeeecccchhhc
Confidence 999999999 88999999999999998874321 123478899999999999999999999998 8999999999999
Q ss_pred CccccccccccCCccccCCCcccccccCCeEEEEeCCCCCCCCC---CCceeEEEecCccccccccCCcceeeeee
Q 014952 340 GPVLSMCLAFAKEPFEIKSGACGTVVRNAEMKIVDPDTGISLPR---NQAGEICIRGAQIMKGTYHIYAPFLLSIV 412 (415)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~G~p~~~~~v~i~d~~~~~~~~~---g~~Gel~v~~~~~~~gY~~~~~~~~~~~~ 412 (415)
+..++.. .......+++|+|+++++++|+| +++++++. |+.|||+|+||+++.|||++|+.+..+|.
T Consensus 310 ~~~~~~~-----~~~~~~~~~vG~p~~~~~~~i~d-~~g~~~~~~~~g~~GEl~v~g~~v~~GY~~~~~~t~~~f~ 379 (505)
T 3nyq_A 310 LMNTSVR-----ADGEPRAGTVGVPLPGVELRLVE-EDGTPIAALDGESVGEIQVRGPNLFTEYLNRPDATAAAFT 379 (505)
T ss_dssp EEEEECC-----TTSCCCTTCCCEECTTCEEEEC------CCCCCCSCCCEEEEEESTTSCCEETTCHHHHHHTBC
T ss_pred ccccccC-----CCCCCCCCCcccCCCCCEEEEEC-CCCCCcccCCCCceEEEEEecCchhhhhCCChhHhhhhhc
Confidence 8654433 23345668899999999999999 45888876 89999999999999999999999988874
No 32
>3hgu_A EHPF; phenazine, antibiotic, biosynthetic protein; 1.95A {Pantoea agglomerans} PDB: 3hgv_A 3l2k_A*
Probab=99.98 E-value=3.1e-32 Score=254.90 Aligned_cols=219 Identities=17% Similarity=0.164 Sum_probs=179.4
Q ss_pred cCCCCCeEEEecCCCCCCCCceeeechHHHHHHHhhhhcCCCCCccCCCCcEEEEccch-HHHHhhHHHHHHHHHcCcEE
Q 014952 178 KINPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPL-FHIYSLNSVLLCALRVGAAI 256 (415)
Q Consensus 178 ~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pl-~~~~g~~~~~l~~l~~G~~~ 256 (415)
...++++++|+|||||||.||+|.++|+++.....+...... ..++.+++++++..|+ +|..++.. .+.++..|+ +
T Consensus 87 ~~~~~~~a~i~~TSGTTG~PKgv~~t~~~~~~~~~~~~~~~~-~~~~~~~d~~l~~~p~g~~~~g~~~-~~~~~~~G~-~ 163 (369)
T 3hgu_A 87 GLPADSHPQVYESGGTTGAPKYVVAYDAWIEALISWRMSGYQ-HRPGRPSGNTLAAIPTGPHIVGAIN-KERALRLGG-M 163 (369)
T ss_dssp TSCTTCCCEEEEECC---CCEEEEECHHHHHHHHHHHTTTTT-TSTTCCCCEEEECSCCTTCHHHHHH-HHHHHHTTS-C
T ss_pred cCCccccEEEEECCCCCCCCCEEEECHHHHHHHHHHHHhhHH-hhCCCCcceEEEecCCCchhhhHHH-HHHHHHcCC-E
Confidence 346788999999999999999999999999988875543332 4567899999999999 99999874 566688999 6
Q ss_pred EEcCCCCHH-----------------------HHHHHHHhcCceeeecchHHHHHHHcCCCCCCCCcccceeeeecCCCC
Q 014952 257 LIMQKFDIV-----------------------KLMELVQKYKVTVAPFVPPIVLAVAKSGDVDKYDMSSIRTVMSGAAPM 313 (415)
Q Consensus 257 v~~~~~~~~-----------------------~~~~~l~~~~~t~l~~~p~~l~~l~~~~~~~~~~l~~lr~v~~gG~~l 313 (415)
++...+++. .+++.++++++|++.++|+++..|++.......+++++|.+++||+++
T Consensus 164 v~~~~~dp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~t~l~~~Ps~~~~l~~~~~~~~~~~~~lr~i~~gGe~l 243 (369)
T 3hgu_A 164 FFSIDIDPRWVKRSLSEGDTATVRKYTHHLVDQVQNTLMNQDIRFLVTTPPVLRELLKRPEVVLQMKQSLAQITLGGTEL 243 (369)
T ss_dssp EECCCCCHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHSCEEEEEECHHHHHHHTTCHHHHHHHHHHCSEEEEESSCC
T ss_pred EECccCChHHHHHhhcccchhhhHHHHHHHHHHHHHHHHhCCCCEEEeCHHHHHHHHhhhhhhccccCCeeEEEECCccC
Confidence 666667777 888899999999999999999999877433335578999999999999
Q ss_pred CHHHHHHHH-hhCCCCccccccccccCCccccccccccCCccccCCC-ccccc------ccCCeEEEEeCCCCCCCCCCC
Q 014952 314 GKELEDAVR-AKLPHAKLGQGYGMTEAGPVLSMCLAFAKEPFEIKSG-ACGTV------VRNAEMKIVDPDTGISLPRNQ 385 (415)
Q Consensus 314 ~~~~~~~~~-~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~-~~G~p------~~~~~v~i~d~~~~~~~~~g~ 385 (415)
++++.+++. +.||++++++.||+||+++++..+ ++ ++|+| +|+++++|+|++++++++.|+
T Consensus 244 ~~~~~~~~~~~~~p~~~v~~~YG~TE~~~~~~~~-----------~~~~~G~~~~~~~~~~~~~v~ivD~~~g~~vp~G~ 312 (369)
T 3hgu_A 244 NLDEIKFIASEILPDCEFSASYGSTSALGVSRSL-----------LITSESQQVIYDSFSPFITYDVVDSITAQTVEYGE 312 (369)
T ss_dssp CHHHHHHHHHHTCTTSEEEEEEEEGGGTEEEEEC-----------CBCTTCSSCEEECCTTTEEEEEECTTTCSBCCTTC
T ss_pred CHHHHHHHHHHhCCCcEEEcccCchhhhcceecc-----------ccccCCCcccccCCCCCeEEEEECCCCCcCCCCCC
Confidence 999999999 999899999999999998654322 22 58999 999999999987899999999
Q ss_pred ceeEEEecC---ccccccccCCcceeee
Q 014952 386 AGEICIRGA---QIMKGTYHIYAPFLLS 410 (415)
Q Consensus 386 ~Gel~v~~~---~~~~gY~~~~~~~~~~ 410 (415)
.|||+|++. .+..+|...+.+....
T Consensus 313 ~GEl~vt~l~~~~~l~ry~tgD~~~~~~ 340 (369)
T 3hgu_A 313 RGNVIVTHLSPWAFYPRVAERDTAIRLP 340 (369)
T ss_dssp EEEEEEEEEETTEEEEEEEEEEEEEEEC
T ss_pred ceEEEEEEcCcccccccccCCceEEEec
Confidence 999999973 3366777766655443
No 33
>3qov_A Phenylacetate-coenzyme A ligase; acetyl-COA synthetase-like, structural genomics, joint cente structural genomics, JCSG; HET: MSE ADP COA; 2.20A {Bacteroides thetaiotaomicron} PDB: 3s89_A*
Probab=99.97 E-value=1.1e-30 Score=249.81 Aligned_cols=208 Identities=19% Similarity=0.185 Sum_probs=172.0
Q ss_pred cCCC-CCeEEEecCCCCCCCCceeeechHHHHHHHhhhhcCCCCCccCCCCcEEEEccchHHHHhhHHHHHHHHHcCcEE
Q 014952 178 KINP-DDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAI 256 (415)
Q Consensus 178 ~~~~-~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~l~~l~~G~~~ 256 (415)
...+ +++++|+|||||||.||+|.++|+++............ .+++.++++++...|+.|..+.+..++.++..|+++
T Consensus 81 ~~~~~~~~a~i~~TSGTTG~PK~v~~th~~~~~~~~~~~~~~~-~~~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~G~~~ 159 (436)
T 3qov_A 81 AGDMKRDGVRIHSSSGTTGNPTVIVHSQHDLDSWANLVARCLY-MVGIRKTDVFQNSSGYGMFTGGLGFQYGAERLGCLT 159 (436)
T ss_dssp CSCHHHHEEEEEECSCSSSCCCEEEEEHHHHHHHHHHHHHHHH-HTTCCTTSEEEECSCCTTCHHHHHHHHHHHHHTCEE
T ss_pred cCCCcCCeEEEEECCCcCCCCeEEEECHHHHHHHHHHHHHHHH-HcCCCCCCEEEECcccccchhHHHHHHHHHHcCCEE
Confidence 3445 88999999999999999999999999776655432111 235788999999999876666655678899999999
Q ss_pred EEcCCCCHHHHHHHHHhcCceeeecchHHHHHHHcCCCCCCC--CcccceeeeecCCCCCHHHHHHHHhhCCCCcccccc
Q 014952 257 LIMQKFDIVKLMELVQKYKVTVAPFVPPIVLAVAKSGDVDKY--DMSSIRTVMSGAAPMGKELEDAVRAKLPHAKLGQGY 334 (415)
Q Consensus 257 v~~~~~~~~~~~~~l~~~~~t~l~~~p~~l~~l~~~~~~~~~--~l~~lr~v~~gG~~l~~~~~~~~~~~~~~~~~~~~Y 334 (415)
++.+.+++..+++.++++++|++.++|+++..|++....... .++++|.+++||+++++++.+++.+.| ++++++.|
T Consensus 160 ~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~i~~gGe~l~~~~~~~~~~~~-g~~v~~~Y 238 (436)
T 3qov_A 160 VPAAAGNSKRQIKFISDFKTTALHAIPSYAIRLAEVFQEEGIDPRETTLKTLVIGAEPHTDEQRRKIERML-NVKAYNSF 238 (436)
T ss_dssp ECCCSCCHHHHHHHHHHHTCCEEECCHHHHHHHHHHHHHTTCCTTSSSCCEEEEESSCCCHHHHHHHHHHH-TSEEEEEE
T ss_pred EeCCCCCHHHHHHHHHHHCCCEEEECHHHHHHHHHHHHHcCCCcccCCccEEEEeCCcCCHHHHHHHHHHh-CccEEecC
Confidence 999888999999999999999999999999999876433333 378999999999999999999999999 89999999
Q ss_pred ccccCCccccccccccCCccccCCCcccccccCCeEEEEeCCCCCCCCCCCceeEEEecC
Q 014952 335 GMTEAGPVLSMCLAFAKEPFEIKSGACGTVVRNAEMKIVDPDTGISLPRNQAGEICIRGA 394 (415)
Q Consensus 335 G~tE~~~~~~~~~~~~~~~~~~~~~~~G~p~~~~~v~i~d~~~~~~~~~g~~Gel~v~~~ 394 (415)
|+||+++...... .......|.|.++++++|+|++++++++.|+.|||+|+|.
T Consensus 239 G~TE~~~~~~~~~-------~~~~~g~~~~~~~~~v~i~d~~~g~~~~~g~~Gel~v~~~ 291 (436)
T 3qov_A 239 GMTEMNGPGVAFE-------CQEQNGMHFWEDCYLVEIIDPETGEPVPEGEIGELVLTTL 291 (436)
T ss_dssp EEGGGTEEEEEEE-------CTTCSSEEECTTTEEEEEECTTTCSBCSTTCCEEEEEEES
T ss_pred cchhhcCCeeEEe-------cCCCCeeEEccCceEEEEEECCCCCCCCCCCceEEEEecc
Confidence 9999965422221 1122336777889999999988999999999999999985
No 34
>4gs5_A Acyl-COA synthetase (AMP-forming)/AMP-acid ligase protein; structural genomics, PSI-biology; 2.02A {Dyadobacter fermentans}
Probab=99.96 E-value=3.4e-30 Score=239.30 Aligned_cols=197 Identities=18% Similarity=0.192 Sum_probs=166.8
Q ss_pred CCCCeEEEecCCCCCCCCceeeechHHHHHHHhhhhcCCCCCccCCCCcEEEEccchHHHHhhHHHHHHHHHcCcEEEEc
Q 014952 180 NPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIM 259 (415)
Q Consensus 180 ~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~l~~l~~G~~~v~~ 259 (415)
..+++++|+|||||||.||+|++||+++.+++..... .+.++++|++++.+|++|.+|+. .++.++..|+++++.
T Consensus 35 ~~d~~a~Il~TSGTTG~PKgV~~th~~l~~~~~~~~~----~~~~~~~d~~l~~~pl~h~~gl~-~~~~~l~~g~~~~~~ 109 (358)
T 4gs5_A 35 LGGAREFVLHTSGSTGMPKPITVTRAQLAASAAMTGK----ALSLGPGTRALVCLNVGYIAGLM-MLVRGMELDWELTVT 109 (358)
T ss_dssp HHTCSEEEEEEECTTSSEEEEEEEHHHHHHHHHHHHH----HTTCCTTCEEEECSCTTSHHHHH-HHHHHHHHTCEEEEE
T ss_pred CCCCCEEEEECCcccccCcEEEEeHHHHHHHHHHHHH----HhCCCCCCEEEEECChHHHHHHH-HHHHHHHhCcEEEec
Confidence 3578999999999999999999999999998888777 55688999999999999999998 478889999999887
Q ss_pred CCCCHHHHHHHHHhcCceeeecchHHHHHHHcCCCCCCCCcccceeeeecCCCCCHHHHHHHHhhCCCCccccccccccC
Q 014952 260 QKFDIVKLMELVQKYKVTVAPFVPPIVLAVAKSGDVDKYDMSSIRTVMSGAAPMGKELEDAVRAKLPHAKLGQGYGMTEA 339 (415)
Q Consensus 260 ~~~~~~~~~~~l~~~~~t~l~~~p~~l~~l~~~~~~~~~~l~~lr~v~~gG~~l~~~~~~~~~~~~~~~~~~~~YG~tE~ 339 (415)
++. ...++.++++++|++.++|.++..|++... ...++++||.+++||+++++++.+++++. +.++++.||+||+
T Consensus 110 ~~~--~~~~~~i~~~~~t~~~~~P~~l~~ll~~~~-~~~~l~~lr~v~~gG~~l~~~~~~~~~~~--~~~~~~~YG~TEt 184 (358)
T 4gs5_A 110 EPT--ANPLAGLDHADFDFVAMVPMQLQSILENSA-TSGQVDRLGKVLLGGAPVNHALAMQISDL--AMPVYQSYGMTET 184 (358)
T ss_dssp CCC--SCTTTTCSSCCCSEEEECHHHHHHHHHCTT-TGGGGGGGCSEEECSSCCCHHHHHHHHTC--SSCEEEEEECGGG
T ss_pred Ccc--ccHHHHHHHhCCeEEEcChHHHHHhhcccc-ccccCCcceEEEEcccCCCchheeccccc--CceEEeccccccc
Confidence 642 123667889999999999999999988764 34568999999999999999999999875 8999999999999
Q ss_pred CccccccccccCCccccCCCcccccccCCeEEEEeCCCCCCCCCCCceeEEEecCcccccccc
Q 014952 340 GPVLSMCLAFAKEPFEIKSGACGTVVRNAEMKIVDPDTGISLPRNQAGEICIRGAQIMKGTYH 402 (415)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~G~p~~~~~v~i~d~~~~~~~~~g~~Gel~v~~~~~~~gY~~ 402 (415)
++.++... ......+.+|.+.|++++++.+ .|||+++|+....|||.
T Consensus 185 ~~~~~~~~-----~~~~~~g~~~~~~pgv~~~~~~-----------~Gel~~~g~~~~~g~~~ 231 (358)
T 4gs5_A 185 VSHVALKA-----LNGPEASELYVFLPGIQYGVDE-----------RGCLHISGAVTNGQTVQ 231 (358)
T ss_dssp SSEEEEEE-----CSSTTCCSCEEECTTCEEEECT-----------TSEEEEESGGGTTCCEE
T ss_pred cceeeccc-----ccccccceeeccCCCeEEEecC-----------cCceEEecccccCccee
Confidence 87665542 2334567899999999988744 39999999988877764
No 35
>2y27_A Phenylacetate-coenzyme A ligase; phenylacetic acid degradation pathway; HET: MSE PG4 ATP; 1.60A {Burkholderia cenocepacia} PDB: 2y4n_A*
Probab=99.96 E-value=3.2e-29 Score=239.82 Aligned_cols=207 Identities=20% Similarity=0.225 Sum_probs=168.2
Q ss_pred cCCCCCeEEEecCCCCCCCCceeeechHHHHHHHhhhhcCCCCCccCCCCcEEEEccch-HHHHhhHHHHHHHHHcCcEE
Q 014952 178 KINPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPL-FHIYSLNSVLLCALRVGAAI 256 (415)
Q Consensus 178 ~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pl-~~~~g~~~~~l~~l~~G~~~ 256 (415)
...++++++|+|||||||.||+|.++|+++............ .+++.++++++..+|+ +|..++. ..+.++..|+++
T Consensus 86 ~~~~~~~~~i~~TSGTTG~PK~v~~t~~~~~~~~~~~~~~~~-~~~~~~~d~~~~~~~~~~~~~~~~-~~~~~~~~G~~~ 163 (437)
T 2y27_A 86 AVPQDRISRIHASSGTTGKPTVVGYTAADIDTWANLVARSIR-AAGARRGDKVHVSYGYGLFTGGLG-AHYGAERAGLTV 163 (437)
T ss_dssp SSCGGGCCEEEECCCTTSSCCEEEECHHHHHHHHHHHHHHHH-HTTCCTTCEEEECSCCSSSHHHHH-HHHHHHHTTCEE
T ss_pred cCChhHeEEEEECCCCCCCceEEecCHHHHHHHHHHHHHHHH-HcCCCCCCEEEEcccccccccchH-HHHHHHHcCCEE
Confidence 345688999999999999999999999998776543332110 2357889999999998 6777765 478899999999
Q ss_pred EEcCCCCHHHHHHHHHhcCceeeecchHHHHHHHcCCCCCCC--CcccceeeeecCCCCCHHHHHHHHhhCCCCcccccc
Q 014952 257 LIMQKFDIVKLMELVQKYKVTVAPFVPPIVLAVAKSGDVDKY--DMSSIRTVMSGAAPMGKELEDAVRAKLPHAKLGQGY 334 (415)
Q Consensus 257 v~~~~~~~~~~~~~l~~~~~t~l~~~p~~l~~l~~~~~~~~~--~l~~lr~v~~gG~~l~~~~~~~~~~~~~~~~~~~~Y 334 (415)
++.+.+++..+++.++++++|++.++|+++..|++....... .++++|.+++||+++++++.+++.+.| ++++++.|
T Consensus 164 ~~~~~~~~~~~~~~i~~~~~t~l~~~Ps~~~~l~~~~~~~~~~~~~~~lr~i~~gGe~l~~~~~~~~~~~~-g~~v~~~Y 242 (437)
T 2y27_A 164 IPFGGGQTEKQVQLIQDFRPDIIMVTPSYMLSIADEIERQGLDPVQSSLRIGIFGAEPWTNDMRVAIEQRM-GIDAVDIY 242 (437)
T ss_dssp ECCCSCCHHHHHHHHHHHCCSEEEECHHHHHHHHHHHHHTTCCGGGSSCCEEEEESSCCCHHHHHHHHHHH-TSEEEEEE
T ss_pred EeCCCCCHHHHHHHHHHhCCCEEEECHHHHHHHHHHHHHcCCCcccCCeeEEEEcCccCCHHHHHHHHHHH-CcCEEecC
Confidence 988888999999999999999999999999999875432222 257999999999999999999999999 89999999
Q ss_pred ccccCCcc-ccccccccCCccccCCCcccccccCCeEEEEeCCCCCCCCCCCceeEEEecC
Q 014952 335 GMTEAGPV-LSMCLAFAKEPFEIKSGACGTVVRNAEMKIVDPDTGISLPRNQAGEICIRGA 394 (415)
Q Consensus 335 G~tE~~~~-~~~~~~~~~~~~~~~~~~~G~p~~~~~v~i~d~~~~~~~~~g~~Gel~v~~~ 394 (415)
|+||+++. ++... .. .....+.|.+++.++|+|+++|++++.|+.|||+|+|.
T Consensus 243 G~TE~~g~~~~~~~----~~---~~~g~~~~~~~~~~~i~d~~~g~~~~~g~~Gel~v~~~ 296 (437)
T 2y27_A 243 GLSEVMGPGVASEC----VE---TKDGPTIWEDHFYPEIIDPETGEVLPDGELGELVFTSL 296 (437)
T ss_dssp EETTTTEEEEEECC----TT---TCSSCEECTTTEEEEEECTTTCCBCCTTCCEEEEEEES
T ss_pred CchhhcCCeeEEec----CC---CCCceeEccCceEEEEEcCCCCCCCCCCCccEEEEecC
Confidence 99998543 32210 10 11125667789999999988899999999999999984
No 36
>2y4o_A Phenylacetate-coenzyme A ligase; phenylacetic acid degradation pathway; HET: DLL; 1.90A {Burkholderia cenocepacia}
Probab=99.96 E-value=5.3e-29 Score=238.72 Aligned_cols=207 Identities=20% Similarity=0.210 Sum_probs=167.4
Q ss_pred cCCCCCeEEEecCCCCCCCCceeeechHHHHHHHhhhhcCCCCCccCCCCcEEEEccch-HHHHhhHHHHHHHHHcCcEE
Q 014952 178 KINPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPL-FHIYSLNSVLLCALRVGAAI 256 (415)
Q Consensus 178 ~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pl-~~~~g~~~~~l~~l~~G~~~ 256 (415)
...++++++|+|||||||.||+|.++|+++............ .+++.++++++...|+ +|..++. ..+.++..|+++
T Consensus 88 ~~~~~~~~~i~~TSGTTG~PK~v~~t~~~~~~~~~~~~~~~~-~~~~~~~d~~l~~~~~~~~~~~~~-~~~~~~~~G~~~ 165 (443)
T 2y4o_A 88 AVPREQVVRVHASSGTTGKPTVVGYTARDIDTWANVTARSIR-AAGGRPGDTLHNAFGYGLFTGGLG-IHYGAERLGCMV 165 (443)
T ss_dssp SSCGGGCCEEEEECCSSSSCEEEEECHHHHHHHHHHHHHHHH-HTTCCTTCEEEECSCCSSSHHHHH-HHHHHHHHTCEE
T ss_pred CCChhheEEEEECCCCCCCceEEecCHHHHHHHHHHHHHHHH-HcCCCCCCEEEEeccCcccccHHH-HHHHHHHcCCEE
Confidence 346688999999999999999999999998775544332110 2357889999999998 5666665 578889999999
Q ss_pred EEcCCCCHHHHHHHHHhcCceeeecchHHHHHHHcCCCCCCC--CcccceeeeecCCCCCHHHHHHHHhhCCCCcccccc
Q 014952 257 LIMQKFDIVKLMELVQKYKVTVAPFVPPIVLAVAKSGDVDKY--DMSSIRTVMSGAAPMGKELEDAVRAKLPHAKLGQGY 334 (415)
Q Consensus 257 v~~~~~~~~~~~~~l~~~~~t~l~~~p~~l~~l~~~~~~~~~--~l~~lr~v~~gG~~l~~~~~~~~~~~~~~~~~~~~Y 334 (415)
++.+.+++..+++.++++++|++.++|+++..|++....... .++++|.+++||+++++++.+++.+.| ++++++.|
T Consensus 166 ~~~~~~~~~~~~~~i~~~~~t~l~~~Ps~~~~l~~~~~~~~~~~~~~~lr~i~~gGe~l~~~~~~~~~~~~-g~~v~~~Y 244 (443)
T 2y4o_A 166 VPMSGGQTEKQVQLIRDFEPKIILVTPSYMLNLIDEMVRQGMDPAESSLKIGIFGAEPWTQALRNEVETRV-GIDALDIY 244 (443)
T ss_dssp ECCCSCCHHHHHHHHHHHCCSEEEECHHHHHHHHHHHHHTTCCGGGSSCCEEEEESSCCCHHHHHHHHHHH-TCEEEEEE
T ss_pred EECCCCCHHHHHHHHHHhCCcEEEECHHHHHHHHHHHHHcCCCcccCCceEEEECCCcCCHHHHHHHHHHh-CcCEEecc
Confidence 998888999999999999999999999999998875432232 258999999999999999999999999 89999999
Q ss_pred ccccCCcc-ccccccccCCccccCCCcccccccCCeEEEEeCCCCCCCCCCCceeEEEecC
Q 014952 335 GMTEAGPV-LSMCLAFAKEPFEIKSGACGTVVRNAEMKIVDPDTGISLPRNQAGEICIRGA 394 (415)
Q Consensus 335 G~tE~~~~-~~~~~~~~~~~~~~~~~~~G~p~~~~~v~i~d~~~~~~~~~g~~Gel~v~~~ 394 (415)
|+||+++. ++... .. .....+.|.+++.++|+|++++++++.|+.|||+|+|.
T Consensus 245 G~TE~~g~~~~~~~----~~---~~~g~~~~~~~~~~~i~d~~~g~~~~~G~~Gel~v~~~ 298 (443)
T 2y4o_A 245 GLSEVMGPGVACEC----VE---TKDGPVIWEDHFYPEIIDPVTGEVLPDGSQGELVFTSL 298 (443)
T ss_dssp EETTTTEEEEEEEC----TT---TCCSEEECTTTEEEEEECTTTCCBCCTTCCEEEEEEES
T ss_pred CchhhcCCeEEecc----CC---CCCceEEccCCeEEEEEcCCCCCCCCCCCceEEEEeCC
Confidence 99998543 22210 10 11125556789999999988899999999999999984
No 37
>4eql_A 4-substituted benzoates-glutamate ligase GH3.12; firefly luciferase family, acyl adenylase, amino acid conjug ligase; HET: AMP SAL; 1.80A {Arabidopsis thaliana} PDB: 4epm_A* 4eq4_A* 4ewv_A*
Probab=95.10 E-value=0.14 Score=49.37 Aligned_cols=31 Identities=29% Similarity=0.314 Sum_probs=25.8
Q ss_pred CCCCCeEEEecCCCCC-CCCceeeechHHHHH
Q 014952 179 INPDDVVALPYSSGTT-GLPKGVMLTHKGLVT 209 (415)
Q Consensus 179 ~~~~~~a~i~~TSGtT-G~pK~v~~t~~~l~~ 209 (415)
..++.+.+..-||||| |++|.+.+|...+-.
T Consensus 90 L~~~pi~~F~~SSGTT~g~~K~IP~T~e~l~~ 121 (581)
T 4eql_A 90 ISARTITGFLLSSGTSGGAQKMMPWNNKYLDN 121 (581)
T ss_dssp TCSSCCCEEEEEEEEETTEEEEEEECHHHHHH
T ss_pred cCCCCCCeEEeCCCCCCCCccccccCHHHHHH
Confidence 4566777888999999 789999999998754
No 38
>2y27_A Phenylacetate-coenzyme A ligase; phenylacetic acid degradation pathway; HET: MSE PG4 ATP; 1.60A {Burkholderia cenocepacia} PDB: 2y4n_A*
Probab=93.54 E-value=0.74 Score=42.96 Aligned_cols=103 Identities=21% Similarity=0.189 Sum_probs=78.6
Q ss_pred CCCCcEEEeCCCC-------CeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCc--hhHHHHHHHHHHhCCeEeecC
Q 014952 38 FADRPCIINGPTG-------DVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNC--PQFVFAFLGASYIGATSTTAN 108 (415)
Q Consensus 38 ~p~~~a~~~~~~~-------~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~--~~~~~~~lA~~~~G~~~v~l~ 108 (415)
.++.++.+...+| ..+|.+.+...+..++..+...|+.++|++....+-. ...+...++++..|+..++.+
T Consensus 88 ~~~~~~~i~~TSGTTG~PK~v~~t~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~ 167 (437)
T 2y27_A 88 PQDRISRIHASSGTTGKPTVVGYTAADIDTWANLVARSIRAAGARRGDKVHVSYGYGLFTGGLGAHYGAERAGLTVIPFG 167 (437)
T ss_dssp CGGGCCEEEECCCTTSSCCEEEECHHHHHHHHHHHHHHHHHTTCCTTCEEEECSCCSSSHHHHHHHHHHHHTTCEEECCC
T ss_pred ChhHeEEEEECCCCCCCceEEecCHHHHHHHHHHHHHHHHHcCCCCCCEEEEcccccccccchHHHHHHHHcCCEEEeCC
Confidence 3456665533332 3589999988888888888788999999999888853 344556788889999998776
Q ss_pred CCCCHHHHHHHHHhcCceEEEEcccchHHHHhh
Q 014952 109 PFYTPPEIAKQAIASKAKIIITQAVYNDKVRDL 141 (415)
Q Consensus 109 ~~~~~~~~~~~l~~~~~~~vl~~~~~~~~~~~~ 141 (415)
.. +.+.+...+++.++.+++........+...
T Consensus 168 ~~-~~~~~~~~i~~~~~t~l~~~Ps~~~~l~~~ 199 (437)
T 2y27_A 168 GG-QTEKQVQLIQDFRPDIIMVTPSYMLSIADE 199 (437)
T ss_dssp SC-CHHHHHHHHHHHCCSEEEECHHHHHHHHHH
T ss_pred CC-CHHHHHHHHHHhCCCEEEECHHHHHHHHHH
Confidence 54 788899999999999999988776665443
No 39
>2y4o_A Phenylacetate-coenzyme A ligase; phenylacetic acid degradation pathway; HET: DLL; 1.90A {Burkholderia cenocepacia}
Probab=92.47 E-value=1.2 Score=41.51 Aligned_cols=89 Identities=17% Similarity=0.126 Sum_probs=72.3
Q ss_pred CeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCc--hhHHHHHHHHHHhCCeEeecCCCCCHHHHHHHHHhcCceEE
Q 014952 51 DVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNC--PQFVFAFLGASYIGATSTTANPFYTPPEIAKQAIASKAKII 128 (415)
Q Consensus 51 ~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~--~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~v 128 (415)
..+|.+.+...+..++..+...|+.++|++....+-+ ...+...++++..|+..++.++. ..+.+...+++.++.++
T Consensus 110 v~~t~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~-~~~~~~~~i~~~~~t~l 188 (443)
T 2y4o_A 110 VGYTARDIDTWANVTARSIRAAGGRPGDTLHNAFGYGLFTGGLGIHYGAERLGCMVVPMSGG-QTEKQVQLIRDFEPKII 188 (443)
T ss_dssp EEECHHHHHHHHHHHHHHHHHTTCCTTCEEEECSCCSSSHHHHHHHHHHHHHTCEEECCCSC-CHHHHHHHHHHHCCSEE
T ss_pred EecCHHHHHHHHHHHHHHHHHcCCCCCCEEEEeccCcccccHHHHHHHHHHcCCEEEECCCC-CHHHHHHHHHHhCCcEE
Confidence 3589999988888888888788999999999888853 34455678888999999887764 78889999999999999
Q ss_pred EEcccchHHHHh
Q 014952 129 ITQAVYNDKVRD 140 (415)
Q Consensus 129 l~~~~~~~~~~~ 140 (415)
+........+..
T Consensus 189 ~~~Ps~~~~l~~ 200 (443)
T 2y4o_A 189 LVTPSYMLNLID 200 (443)
T ss_dssp EECHHHHHHHHH
T ss_pred EECHHHHHHHHH
Confidence 988877665544
No 40
>3qov_A Phenylacetate-coenzyme A ligase; acetyl-COA synthetase-like, structural genomics, joint cente structural genomics, JCSG; HET: MSE ADP COA; 2.20A {Bacteroides thetaiotaomicron} PDB: 3s89_A*
Probab=92.40 E-value=1.1 Score=41.62 Aligned_cols=101 Identities=18% Similarity=0.110 Sum_probs=79.0
Q ss_pred CCcEEEeCCCC-------CeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCC--chhHHHHHHHHHHhCCeEeecCCC
Q 014952 40 DRPCIINGPTG-------DVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQN--CPQFVFAFLGASYIGATSTTANPF 110 (415)
Q Consensus 40 ~~~a~~~~~~~-------~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~--~~~~~~~~lA~~~~G~~~v~l~~~ 110 (415)
+.++++...+| ..+|.+.+...+..++..+...|+.++|++....+- ....+...++++..|+..++.++.
T Consensus 86 ~~~a~i~~TSGTTG~PK~v~~th~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~G~~~~~~~~~ 165 (436)
T 3qov_A 86 RDGVRIHSSSGTTGNPTVIVHSQHDLDSWANLVARCLYMVGIRKTDVFQNSSGYGMFTGGLGFQYGAERLGCLTVPAAAG 165 (436)
T ss_dssp HHEEEEEECSCSSSCCCEEEEEHHHHHHHHHHHHHHHHHTTCCTTSEEEECSCCTTCHHHHHHHHHHHHHTCEEECCCSC
T ss_pred CCeEEEEECCCcCCCCeEEEECHHHHHHHHHHHHHHHHHcCCCCCCEEEECcccccchhHHHHHHHHHHcCCEEEeCCCC
Confidence 55666544333 358999999988888888888899999999988874 344455678889999999887654
Q ss_pred CCHHHHHHHHHhcCceEEEEcccchHHHHhh
Q 014952 111 YTPPEIAKQAIASKAKIIITQAVYNDKVRDL 141 (415)
Q Consensus 111 ~~~~~~~~~l~~~~~~~vl~~~~~~~~~~~~ 141 (415)
..+.+...+++.++.+++........+...
T Consensus 166 -~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~ 195 (436)
T 3qov_A 166 -NSKRQIKFISDFKTTALHAIPSYAIRLAEV 195 (436)
T ss_dssp -CHHHHHHHHHHHTCCEEECCHHHHHHHHHH
T ss_pred -CHHHHHHHHHHHCCCEEEECHHHHHHHHHH
Confidence 678889999999999999988876665543
No 41
>3ipl_A 2-succinylbenzoate--COA ligase; structural genomics, acyl-protein synthetase, PSI-2, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=85.94 E-value=8.4 Score=36.39 Aligned_cols=101 Identities=13% Similarity=0.023 Sum_probs=75.1
Q ss_pred cCCCCcEEEeCCCC-------CeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCc-hhHHHHHHHHHHhCCeEeecC
Q 014952 37 QFADRPCIINGPTG-------DVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNC-PQFVFAFLGASYIGATSTTAN 108 (415)
Q Consensus 37 ~~p~~~a~~~~~~~-------~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~-~~~~~~~lA~~~~G~~~v~l~ 108 (415)
..++.++++...+| ..+|.+.+...+..+... .++.++|++...++-. .-.+..+++++..|+..+..+
T Consensus 160 ~~~~d~a~i~~TSGTTG~PKgv~~th~~~~~~~~~~~~~---~~~~~~d~~l~~~p~~~~~g~~~~~~~l~~G~~~~~~~ 236 (501)
T 3ipl_A 160 FNLDDIASIMFTSGTTGPQKAVPQTFRNHYASAIGCKES---LGFDRDTNWLSVLPIYHISGLSVLLRAVIEGFTVRIVD 236 (501)
T ss_dssp CCTTSEEEEEECCTTTSCCCEEEEEHHHHHHHHHHHHHH---TCCCTTCEEEECSCTTSHHHHHHHHHHHHHTCEEEECS
T ss_pred CCCCCeEEEEECCCCCCCCcEEEEeHHHHHHHHHHHHHh---hCCCccCEEEEeCcHHHHHHHHHHHHHHHcCceEEeCC
Confidence 35678887754443 468999988777665544 4888999998888854 233344677888999988776
Q ss_pred CCCCHHHHHHHHHhcCceEEEEcccchHHHHhh
Q 014952 109 PFYTPPEIAKQAIASKAKIIITQAVYNDKVRDL 141 (415)
Q Consensus 109 ~~~~~~~~~~~l~~~~~~~vl~~~~~~~~~~~~ 141 (415)
. .+.+.+...+++.++.++.........+...
T Consensus 237 ~-~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~ 268 (501)
T 3ipl_A 237 K-FNAEQILTMIKNERITHISLVPQTLNWLMQQ 268 (501)
T ss_dssp S-CCHHHHHHHHHHSCCCEEEECHHHHHHHHHH
T ss_pred C-CCHHHHHHHHHHcCCcEEEchHHHHHHHHhc
Confidence 4 6789999999999999999988877666543
No 42
>3hgu_A EHPF; phenazine, antibiotic, biosynthetic protein; 1.95A {Pantoea agglomerans} PDB: 3hgv_A 3l2k_A*
Probab=84.45 E-value=3.8 Score=37.03 Aligned_cols=87 Identities=9% Similarity=-0.006 Sum_probs=63.0
Q ss_pred CeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCc--hhHHHHHHHHHHhCCeEeecCCCCCHH--------------
Q 014952 51 DVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNC--PQFVFAFLGASYIGATSTTANPFYTPP-------------- 114 (415)
Q Consensus 51 ~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~--~~~~~~~lA~~~~G~~~v~l~~~~~~~-------------- 114 (415)
..+|.+.+...+..++..+...|+.++|++....+-+ .-.+...+++...|+.+++.+ .++.
T Consensus 109 v~~t~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~g~~~~g~~~~~~~~~~G~~v~~~~--~dp~~~~~~~~~~~~~~~ 186 (369)
T 3hgu_A 109 VVAYDAWIEALISWRMSGYQHRPGRPSGNTLAAIPTGPHIVGAINKERALRLGGMFFSID--IDPRWVKRSLSEGDTATV 186 (369)
T ss_dssp EEECHHHHHHHHHHHTTTTTTSTTCCCCEEEECSCCTTCHHHHHHHHHHHHTTSCEECCC--CCHHHHHHHHHTTCHHHH
T ss_pred EEECHHHHHHHHHHHHhhHHhhCCCCcceEEEecCCCchhhhHHHHHHHHHcCCEEECcc--CChHHHHHhhcccchhhh
Confidence 3579999988888777777778999999999988862 233444555688899666544 2344
Q ss_pred ---------HHHHHHHhcCceEEEEcccchHHHH
Q 014952 115 ---------EIAKQAIASKAKIIITQAVYNDKVR 139 (415)
Q Consensus 115 ---------~~~~~l~~~~~~~vl~~~~~~~~~~ 139 (415)
.+...+++.++.+++........+.
T Consensus 187 ~~~~~~~~~~~~~~i~~~~~t~l~~~Ps~~~~l~ 220 (369)
T 3hgu_A 187 RKYTHHLVDQVQNTLMNQDIRFLVTTPPVLRELL 220 (369)
T ss_dssp HHHHHHHHHHHHHHHHHSCEEEEEECHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHhCCCCEEEeCHHHHHHHH
Confidence 6666888999999998877665543
No 43
>3ni2_A 4-coumarate:COA ligase; 4CL, phenylpropanoid biosynthesis; HET: AYL EPE; 1.90A {Populus tomentosa} PDB: 3a9v_A* 3a9u_A*
Probab=83.59 E-value=3.9 Score=39.15 Aligned_cols=99 Identities=15% Similarity=0.112 Sum_probs=73.4
Q ss_pred CCCCCeEEEecCCCCCCCCceeeechHHHHHHHhhhhcCCCCCccCCCCcEEEEccchHHHHhhHHHHHHHHHcCcEEEE
Q 014952 179 INPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILI 258 (415)
Q Consensus 179 ~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~l~~l~~G~~~v~ 258 (415)
..++.++++.... +..+|...+...+..+...+. ..++.+++++...++-+..+- ..+++++..|+..+.
T Consensus 34 ~~p~~~a~~~~~~-------~~~~Ty~el~~~~~~lA~~L~-~~Gv~~gd~V~i~~~~~~~~~--~~~la~~~~Gav~vp 103 (536)
T 3ni2_A 34 NHSSKPCLINGAN-------GDVYTYADVELTARRVASGLN-KIGIQQGDVIMLFLPSSPEFV--LAFLGASHRGAIITA 103 (536)
T ss_dssp GSTTSEEEEETTT-------CCEEEHHHHHHHHHHHHHHHH-HTTCCTTCEEEEECCSSHHHH--HHHHHHHHHTCEEEE
T ss_pred cCCCceEEEECCC-------CCEEEHHHHHHHHHHHHHHHH-HcCCCCCCEEEEEcCCcHHHH--HHHHHHHHhCCEEec
Confidence 4567888765322 246799988877666665443 356889999999988765433 358999999999998
Q ss_pred cCC-CCHHHHHHHHHhcCceeeecchHHHH
Q 014952 259 MQK-FDIVKLMELVQKYKVTVAPFVPPIVL 287 (415)
Q Consensus 259 ~~~-~~~~~~~~~l~~~~~t~l~~~p~~l~ 287 (415)
+++ ..++.+...++..++.+++.......
T Consensus 104 l~~~~~~~~l~~~l~~~~~~~~i~~~~~~~ 133 (536)
T 3ni2_A 104 ANPFSTPAELAKHAKASRAKLLITQACYYE 133 (536)
T ss_dssp CCTTCCHHHHHHHHHHHTEEEEEECGGGTH
T ss_pred cCCCCCHHHHHHHHHhcCCEEEEEChHHHH
Confidence 875 67888999999999999988765443
No 44
>3g7s_A Long-chain-fatty-acid--COA ligase (FADD-1); protein structure initiative, PSI-II, NYSGXRC, 11193J, structural genomics; 2.15A {Archaeoglobus fulgidus dsm 4304}
Probab=83.49 E-value=5.4 Score=38.32 Aligned_cols=106 Identities=8% Similarity=0.054 Sum_probs=75.6
Q ss_pred CCCCeEEEecCCCCCCCCceeeechHHHHHHHhhhhcCCCCCccCCCCcEEEEccchHHHHhhHHHHHHHHHcCcEEEEc
Q 014952 180 NPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIM 259 (415)
Q Consensus 180 ~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~l~~l~~G~~~v~~ 259 (415)
.++.+|++....+..+ -....+|...+...+..+...+. ..++.++|++...++-+..+- ..+++++..|+..+.+
T Consensus 32 ~p~~~A~~~~~~~~~~-~~~~~~Ty~el~~~~~~lA~~L~-~~Gv~~gd~V~i~~~~~~~~~--~~~lA~~~~G~~~vpl 107 (549)
T 3g7s_A 32 FGEKTAIISAEPKFPS-EFPESMNFLEICEVTKKLASGIS-RKGVRKGEHVGVCIPNSIDYV--MTIYALWRVAATPVPI 107 (549)
T ss_dssp HTTSEEEEEESSCCCC-SSCSEEEHHHHHHHHHHHHHHHH-HTTCCTTCEEEEECCSSHHHH--HHHHHHHHTTCEEEEC
T ss_pred CCCceEEEeCCCcccc-cccceeeHHHHHHHHHHHHHHHH-HcCCCCCCEEEEECCCCHHHH--HHHHHHHHhCCEEEcc
Confidence 4677777765322111 12356788888877666655443 346789999999988765433 3589999999999998
Q ss_pred CC-CCHHHHHHHHHhcCceeeecchHHHHHH
Q 014952 260 QK-FDIVKLMELVQKYKVTVAPFVPPIVLAV 289 (415)
Q Consensus 260 ~~-~~~~~~~~~l~~~~~t~l~~~p~~l~~l 289 (415)
++ ...+.+...++..++.+++........+
T Consensus 108 ~~~~~~~~l~~il~~~~~~~~i~~~~~~~~~ 138 (549)
T 3g7s_A 108 NPMYKSFELEHILNDSEATTLVVHSMLYENF 138 (549)
T ss_dssp CTTCCHHHHHHHHHHTTCSEEEEEGGGHHHH
T ss_pred CCCCCHHHHHHHHHhcCCCEEEEChHHHHHH
Confidence 75 6788899999999999998877655443
No 45
>3ivr_A Putative long-chain-fatty-acid COA ligase; structural genomics, PSI-2, protein S initiative, fatty acid synthesis; HET: GOL; 2.00A {Rhodopseudomonas palustris} SCOP: e.23.1.0
Probab=82.37 E-value=3.9 Score=38.85 Aligned_cols=97 Identities=14% Similarity=0.101 Sum_probs=73.7
Q ss_pred CCCCeEEEecCCCCCCCCceeeechHHHHHHHhhhhcCCCCCccCCCCcEEEEccchHHHHhhHHHHHHHHHcCcEEEEc
Q 014952 180 NPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIM 259 (415)
Q Consensus 180 ~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~l~~l~~G~~~v~~ 259 (415)
.++.+|++. ....+|.+.+...+..+...+. ..+..+++++...++-+..+- ..+++++..|+..+.+
T Consensus 19 ~pd~~Al~~---------~~~~~Ty~eL~~~~~~lA~~L~-~~Gv~~gd~V~i~~~~~~~~~--~~~lA~~~~Ga~~vpl 86 (509)
T 3ivr_A 19 FPDRTAFMV---------DGVRLTHRDYLARAERLASGLL-RDGVHTGDRVAILSQNCSEMI--ELIGAVALIGAILLPV 86 (509)
T ss_dssp STTSEEEEE---------TTEEEEHHHHHHHHHHHHHHHH-HTTCCTTCEEEEECCSCHHHH--HHHHHHHHTTCEEEEC
T ss_pred CCCceEEEE---------CCcEEcHHHHHHHHHHHHHHHH-HcCCCCCCEEEEEcCCCHHHH--HHHHHHHHhCCEEEec
Confidence 467777764 1356899999877766665443 346789999999988765433 3588999999999998
Q ss_pred CC-CCHHHHHHHHHhcCceeeecchHHHHH
Q 014952 260 QK-FDIVKLMELVQKYKVTVAPFVPPIVLA 288 (415)
Q Consensus 260 ~~-~~~~~~~~~l~~~~~t~l~~~p~~l~~ 288 (415)
++ ...+.+...++..++.+++........
T Consensus 87 ~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~ 116 (509)
T 3ivr_A 87 NYRLNADEIAFVLGDGAPSVVVAGTDYRDI 116 (509)
T ss_dssp CTTSCHHHHHHHHHHHCEEEEEECSTTHHH
T ss_pred CCCCCHHHHHHHHHhcCceEEEECcchhhh
Confidence 75 678889999999999999987765544
No 46
>2d1s_A Luciferase, luciferin 4-monooxygenase; alpha/beta, beta barrel, alpha+beta, riken structural genomics/proteomics initiative, RSGI; HET: SLU; 1.30A {Luciola cruciata} PDB: 2d1q_A* 2d1r_A* 2d1t_A*
Probab=81.72 E-value=8.4 Score=36.98 Aligned_cols=99 Identities=10% Similarity=0.054 Sum_probs=72.0
Q ss_pred CCcEEEeCCCC-------CeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhH--HHHHHHHHHhCCeEeecCCC
Q 014952 40 DRPCIINGPTG-------DVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQF--VFAFLGASYIGATSTTANPF 110 (415)
Q Consensus 40 ~~~a~~~~~~~-------~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~--~~~~lA~~~~G~~~v~l~~~ 110 (415)
+.++++...+| ..+|.+.+...+......+...++.++|++....+-.-.+ ...+++.+ .|+..+..+ .
T Consensus 192 ~d~a~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~h~~g~~~~~~~~l-~G~~~v~~~-~ 269 (548)
T 2d1s_A 192 EQVALIMNSSGSTGLPKGVQLTHENIVTRFSHARDPIYGNQVSPGTAVLTVVPFHHGFGMFTTLGYLI-CGFRVVMLT-K 269 (548)
T ss_dssp TCEEEEECCSSCSSSCCCEEEEHHHHHHHHHHHTCTTTSCCCCTTCEEEECSCTTSHHHHHHHHHHHH-TTCEEEECC-C
T ss_pred CCEEEEEeCCCCCCCCCEEEecHHHHHHHHHHhhchhhccCCCccceEEEeccHHHHHHHHHHHHHHh-cCcEEEEcC-C
Confidence 77787755443 4689999877766555443335788999988888754332 33356667 999988775 4
Q ss_pred CCHHHHHHHHHhcCceEEEEcccchHHHHh
Q 014952 111 YTPPEIAKQAIASKAKIIITQAVYNDKVRD 140 (415)
Q Consensus 111 ~~~~~~~~~l~~~~~~~vl~~~~~~~~~~~ 140 (415)
.+.+.+...+++.++.+++........+..
T Consensus 270 ~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~ 299 (548)
T 2d1s_A 270 FDEETFLKTLQDYKCTSVILVPTLFAILNK 299 (548)
T ss_dssp CCHHHHHHHHHHTTEEEEEECHHHHHHHHH
T ss_pred CCHHHHHHHHHHcCCcEEEecHHHHHHHHh
Confidence 678999999999999999998877766544
No 47
>1v25_A Long-chain-fatty-acid-COA synthetase; ligase, structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: ANP; 2.30A {Thermus thermophilus} SCOP: e.23.1.1 PDB: 1ult_A* 1v26_A*
Probab=81.62 E-value=6.5 Score=37.69 Aligned_cols=102 Identities=11% Similarity=0.012 Sum_probs=74.2
Q ss_pred CCCCeEEEecCCCCCCCCceeeechHHHHHHHhhhhcCCCCCccCCCCcEEEEccchHHHHhhHHHHHHHHHcCcEEEEc
Q 014952 180 NPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIM 259 (415)
Q Consensus 180 ~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~l~~l~~G~~~v~~ 259 (415)
.++.+|++.... .....+|...+...+..+...+. ..++.++|++...++-+.-+- ..+++++..|+..+.+
T Consensus 31 ~p~~~a~~~~~~-----~~~~~~Ty~el~~~~~~lA~~L~-~~Gv~~gd~V~i~~~n~~e~~--~~~lA~~~~Gav~vpl 102 (541)
T 1v25_A 31 FGRKEVVSRLHT-----GEVHRTTYAEVYQRARRLMGGLR-ALGVGVGDRVATLGFNHFRHL--EAYFAVPGMGAVLHTA 102 (541)
T ss_dssp STTCEEEEECTT-----SCEEEEEHHHHHHHHHHHHHHHH-HTTCCTTCEEEEECCSSHHHH--HHHHHHHHTTCEEEEC
T ss_pred CCCceEEEEecC-----CCCceecHHHHHHHHHHHHHHHH-HcCCCCCCEEEEEcCCcHHHH--HHHHHHHhcCcEEEec
Confidence 456677664321 13457899988877666555443 456789999999988665333 3588999999999988
Q ss_pred CC-CCHHHHHHHHHhcCceeeecchHHHHHH
Q 014952 260 QK-FDIVKLMELVQKYKVTVAPFVPPIVLAV 289 (415)
Q Consensus 260 ~~-~~~~~~~~~l~~~~~t~l~~~p~~l~~l 289 (415)
++ ...+.+...+++.++.+++..+.....+
T Consensus 103 ~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~ 133 (541)
T 1v25_A 103 NPRLSPKEIAYILNHAEDKVLLFDPNLLPLV 133 (541)
T ss_dssp CTTSCHHHHHHHHHHHTCSEEEECGGGHHHH
T ss_pred CcccCHHHHHHHHHhCCCcEEEEChhHHHHH
Confidence 65 6788999999999999999887655433
No 48
>1mdb_A 2,3-dihydroxybenzoate-AMP ligase; adenylation domain, peptide synthetase, antibiotic biosynthesis, siderophore formation; HET: AMP DBH; 2.15A {Bacillus subtilis} SCOP: e.23.1.1 PDB: 1md9_A* 1mdf_A
Probab=80.03 E-value=19 Score=34.33 Aligned_cols=100 Identities=13% Similarity=0.039 Sum_probs=73.3
Q ss_pred CCCCcEEEeCCCC-------CeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchh--HHH-HHHHHHHhCCeEeec
Q 014952 38 FADRPCIINGPTG-------DVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQ--FVF-AFLGASYIGATSTTA 107 (415)
Q Consensus 38 ~p~~~a~~~~~~~-------~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~--~~~-~~lA~~~~G~~~v~l 107 (415)
.|+.++++...+| ..+|.+.+...+......+ ++.++|++....+-.-. ... .+++.+..|+..+..
T Consensus 180 ~~~d~a~i~~TSGTTG~PKgV~~th~~~~~~~~~~~~~~---~~~~~d~~l~~~p~~h~~~~~~~~~~~~l~~G~~~v~~ 256 (539)
T 1mdb_A 180 KSSDVAFLQLSGGSTGLSKLIPRTHDDYIYSLKRSVEVC---WLDHSTVYLAALPMAHNYPLSSPGVLGVLYAGGRVVLS 256 (539)
T ss_dssp CTTSEEEEEECCCSSSSCCEEEEEHHHHHHHHHHHHHHH---TCCTTCEEEECSCTTSHHHHHSSHHHHHHHTTCEEEEC
T ss_pred CcCceEEEEeCCCcCCCCcEEEEehHHHHHHHHHHHHhh---CCCCCCEEEEeecccccchhhHHHHHHHHHhCCEEEEC
Confidence 4677777654333 4689998877776655443 78899998888875433 332 478888899998876
Q ss_pred CCCCCHHHHHHHHHhcCceEEEEcccchHHHHhh
Q 014952 108 NPFYTPPEIAKQAIASKAKIIITQAVYNDKVRDL 141 (415)
Q Consensus 108 ~~~~~~~~~~~~l~~~~~~~vl~~~~~~~~~~~~ 141 (415)
+ ....+.+...+++.++.++.........+...
T Consensus 257 ~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~ 289 (539)
T 1mdb_A 257 P-SPSPDDAFPLIEREKVTITALVPPLAMVWMDA 289 (539)
T ss_dssp S-SSSHHHHHHHHHHHTCSEEEECHHHHHHHHHH
T ss_pred C-CCCHHHHHHHHHHcCCeEEEccHHHHHHHHhC
Confidence 5 46788899999999999999988776665443
No 49
>3t5a_A Long-chain-fatty-acid--AMP ligase FADD28; acetyl-COA synthetase like fold, AMP-binding; 2.05A {Mycobacterium tuberculosis} PDB: 3e53_A
Probab=79.76 E-value=7.3 Score=36.49 Aligned_cols=108 Identities=13% Similarity=0.020 Sum_probs=76.2
Q ss_pred CCCCCeEEEecCCCCCCCCceeeechHHHHHHHhhhhcCCCCCccCCCCcEEEEccchHHHHhhHHHHHHHHHcCcEEEE
Q 014952 179 INPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILI 258 (415)
Q Consensus 179 ~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~l~~l~~G~~~v~ 258 (415)
..++.+|++.........-....+|...+...+..+...+. ..+. +++++...++-+.-+- ..+++++..|+..+.
T Consensus 36 ~~pd~~Al~~~~~~~~~~g~~~~~Ty~el~~~~~~lA~~L~-~~g~-~gd~V~i~~~n~~e~~--~~~lA~~~~G~v~vp 111 (480)
T 3t5a_A 36 LQPHDPAFTFMDYEQDWDGVAITLTWSQLYRRTLNVAQELS-RCGS-TGDRVVISAPQGLEYV--VAFLGALQAGRIAVP 111 (480)
T ss_dssp HSTTSEEEEEEETTTCTTCEEEEEEHHHHHHHHHHHHHHHT-TSSC-TTCEEEEECCSSHHHH--HHHHHHHHTTCEEEE
T ss_pred hCCCCceEEEecccCCCCCceEEEcHHHHHHHHHHHHHHHH-hcCC-CCCEEEEEcCCcHHHH--HHHHHHHHhCcEEEe
Confidence 35678887765321111113467899999887777776554 3344 8899988887765433 358899999999998
Q ss_pred cCC----CCHHHHHHHHHhcCceeeecchHHHHHHH
Q 014952 259 MQK----FDIVKLMELVQKYKVTVAPFVPPIVLAVA 290 (415)
Q Consensus 259 ~~~----~~~~~~~~~l~~~~~t~l~~~p~~l~~l~ 290 (415)
++. ...+++...++..++.+++........+.
T Consensus 112 l~~~~~~~~~~~l~~il~~~~~~~vi~~~~~~~~~~ 147 (480)
T 3t5a_A 112 LSVPQGGVTDERSDSVLSDSSPVAILTTSSAVDDVV 147 (480)
T ss_dssp ECSCCSCTTCCHHHHHHHHHCCSEEEECTTTHHHHH
T ss_pred eCCCCccchHHHHHHHHHhCCCCEEEeChhHHHHHH
Confidence 864 35678889999999999998877665543
No 50
>1t5h_X 4-chlorobenzoyl COA ligase; adenylate-forming coenzyme A ligase domain alternation confo change; 2.00A {Alcaligenes SP} SCOP: e.23.1.1 PDB: 1t5d_X 3cw9_A* 3cw8_X* 2qvz_X* 2qw0_X* 3dlp_X* 2qvx_X* 2qvy_X*
Probab=79.22 E-value=8.1 Score=36.57 Aligned_cols=99 Identities=21% Similarity=0.218 Sum_probs=70.7
Q ss_pred CCCCeEEEecCCCCCCCCceeeechHHHHHHHhhhhcCCCCCccCCCCcEEEEccchHHHHhhHHHHHHHHHcCcEEEEc
Q 014952 180 NPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIM 259 (415)
Q Consensus 180 ~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~l~~l~~G~~~v~~ 259 (415)
.++.+|++... .+..+|...+...+..+...+. ..+..+++++...++-+.-+- ..+++++..|+..+..
T Consensus 15 ~p~~~a~~~~~-------~~~~~Ty~el~~~~~~~A~~L~-~~Gv~~gd~V~i~~~~~~~~~--~~~lA~~~~G~~~vpl 84 (504)
T 1t5h_X 15 APDHCALAVPA-------RGLRLTHAELRARVEAVAARLH-ADGLRPQQRVAVVAPNSADVV--IAILALHRLGAVPALL 84 (504)
T ss_dssp CTTSEEEEETT-------TTEEEEHHHHHHHHHHHHHHHH-HTTCCTTCEEEEECCSCHHHH--HHHHHHHHHTCEEEEE
T ss_pred CCCceEEEEcC-------CCceeEHHHHHHHHHHHHHHHH-HcCCCCCCEEEEEcCCCHHHH--HHHHHHHHhCcEEEec
Confidence 45677776431 1356899988877666655433 346789999999988765433 3588999999999988
Q ss_pred CC-CCHHHHHHHHHhcCceeeec--chHHHHH
Q 014952 260 QK-FDIVKLMELVQKYKVTVAPF--VPPIVLA 288 (415)
Q Consensus 260 ~~-~~~~~~~~~l~~~~~t~l~~--~p~~l~~ 288 (415)
++ ..++++...+++.++..++. .+.....
T Consensus 85 ~~~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~ 116 (504)
T 1t5h_X 85 NPRLKSAELAELIKRGEMTAAVIAVGRQVADA 116 (504)
T ss_dssp CTTSCHHHHHHHHHHTTCSEEEECC--CHHHH
T ss_pred CCccChHHHHHHHhhcCCcEEEEecchhhhhh
Confidence 75 67888999999999999887 5544433
No 51
>3c5e_A Acyl-coenzyme A synthetase ACSM2A, mitochondrial; middle-chain acyl-COA synthetase, xenobiotic/medium-chain FA COA ligase; HET: ATP; 1.60A {Homo sapiens} PDB: 2vze_A 3b7w_A* 3day_A* 3eq6_A* 3eyn_A* 3gpc_A* 2wd9_A*
Probab=78.36 E-value=10 Score=36.63 Aligned_cols=104 Identities=17% Similarity=0.168 Sum_probs=74.9
Q ss_pred CCCCeEEEecCCCCCCCCceeeechHHHHHHHhhhhcCCCCCccCCCCcEEEEccchHHHHhhHHHHHHHHHcCcEEEEc
Q 014952 180 NPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIM 259 (415)
Q Consensus 180 ~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~l~~l~~G~~~v~~ 259 (415)
.++.+|++.... .| ....+|...+...+..+...+...+++.+++++...++-+.-+- ..+++++..|+..+.+
T Consensus 56 ~p~~~al~~~~~--~g--~~~~~Ty~el~~~~~~lA~~L~~~~Gv~~gd~V~i~~~n~~e~~--~~~lA~~~~Ga~~vpl 129 (570)
T 3c5e_A 56 RPPSPALWWVNG--KG--KELMWNFRELSENSQQAANVLSGACGLQRGDRVAVVLPRVPEWW--LVILGCIRAGLIFMPG 129 (570)
T ss_dssp SCCCEEEEEECS--SS--CEEEEEHHHHHHHHHHHHHHHHTTTCCCTTCEEEEECCSCHHHH--HHHHHHHHHTCEEEEC
T ss_pred CCCceEEEEEcC--CC--ceeEEeHHHHHHHHHHHHHHHHHccCCCCCCEEEEEcCCCHHHH--HHHHHHHHcCeEEEec
Confidence 567788765421 11 23578999888776666654432226789999999988765433 3588999999999988
Q ss_pred CC-CCHHHHHHHHHhcCceeeecchHHHHHH
Q 014952 260 QK-FDIVKLMELVQKYKVTVAPFVPPIVLAV 289 (415)
Q Consensus 260 ~~-~~~~~~~~~l~~~~~t~l~~~p~~l~~l 289 (415)
++ ..++.+...++..++.+++..+.....+
T Consensus 130 ~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~ 160 (570)
T 3c5e_A 130 TIQMKSTDILYRLQMSKAKAIVAGDEVIQEV 160 (570)
T ss_dssp CTTCCHHHHHHHHHHHTCSEEEEETTTHHHH
T ss_pred CCCCCHHHHHHHHHhcCCeEEEechHHHHHH
Confidence 75 6788899999999999998876655443
No 52
>3o83_A Peptide arylation enzyme; ligase, adenylation of 2,3-dihydroxybenzoate and transfer to pantetheine cofactor of BASF; HET: IXN; 1.90A {Acinetobacter baumannii} SCOP: e.23.1.0 PDB: 3o82_A* 3o84_A* 3u16_A* 3u17_A*
Probab=78.32 E-value=21 Score=34.12 Aligned_cols=99 Identities=15% Similarity=0.062 Sum_probs=72.6
Q ss_pred CCCCcEEEeCCCC-------CeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHH---HHHHHHHhCCeEeec
Q 014952 38 FADRPCIINGPTG-------DVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVF---AFLGASYIGATSTTA 107 (415)
Q Consensus 38 ~p~~~a~~~~~~~-------~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~---~~lA~~~~G~~~v~l 107 (415)
.++.++++...+| ..+|.+.+...+...+.. .++.++|++...+|-...+-. .+++.+..|+..+..
T Consensus 189 ~~~d~a~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~---~~~~~~d~~l~~~p~~h~~~~~~~~~~~~l~~G~~~v~~ 265 (544)
T 3o83_A 189 PADEVAFFQLSGGSTGTPKLIPRTHNDYDYSVRASAEI---CGLNSNTRLLCALPAPHNFMLSSPGALGVLHAGGCVVMA 265 (544)
T ss_dssp CTTSEEEEEECCC--CCCCEEEEEHHHHHHHHHHHHHH---TTCCTTCEEEECSCTTSHHHHHSSHHHHHHHTTCEEEEC
T ss_pred CccceEEEEECCCcccCCceEEechHHHHHHHHHHHHH---hCCCCCCeEEEecCcceEeecchHHHHHHHHcCCEEEEC
Confidence 4577777754433 468999988777666554 478899999988875443322 467888899988876
Q ss_pred CCCCCHHHHHHHHHhcCceEEEEcccchHHHHh
Q 014952 108 NPFYTPPEIAKQAIASKAKIIITQAVYNDKVRD 140 (415)
Q Consensus 108 ~~~~~~~~~~~~l~~~~~~~vl~~~~~~~~~~~ 140 (415)
+. .....+...+++.++.++.........+..
T Consensus 266 ~~-~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~ 297 (544)
T 3o83_A 266 PN-PEPLNCFSIIQRHQVNMASLVPSAVIMWLE 297 (544)
T ss_dssp SS-CCHHHHHHHHHHHTCCEEEECHHHHHHHHH
T ss_pred CC-CCHHHHHHHHHHHCCCEEEechHHHHHHHh
Confidence 54 578888899999999999988876655443
No 53
>1ry2_A Acetyl-coenzyme A synthetase 1, acyl-activating enzyme 1; AMP forming, related to firefly luciferase, ligase; HET: AMP; 2.30A {Saccharomyces cerevisiae} SCOP: e.23.1.1
Probab=78.27 E-value=8.1 Score=38.17 Aligned_cols=99 Identities=19% Similarity=0.229 Sum_probs=72.5
Q ss_pred CCCCeEEEecCCCCCCCCceeeechHHHHHHHhhhhcCCCCCccCCCCcEEEEccchHHHHhhHHHHHHHHHcCcEEEEc
Q 014952 180 NPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIM 259 (415)
Q Consensus 180 ~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~l~~l~~G~~~v~~ 259 (415)
.++.+|++.... ..| ....+|...+...+..+...+....++.++|++..++|..--+-. .+++++..|+..+.+
T Consensus 95 ~pd~~Al~~~~~-~~~--~~~~~TY~eL~~~v~~lA~~L~~~~Gv~~Gd~V~i~~~~~~e~v~--a~lA~~~~Gav~vpl 169 (663)
T 1ry2_A 95 TPNKKAIIFEGD-EPG--QGYSITYKELLEEVCQVAQVLTYSMGVRKGDTVAVYMPMVPEAII--TLLAISRIGAIHSVV 169 (663)
T ss_dssp CTTSEEEEEECS-STT--CCEEEEHHHHHHHHHHHHHHHHHTSCCCTTCEEEECCCSSHHHHH--HHHHHHHTTCEEEEC
T ss_pred CCCceEEEEEcC-CCC--ceEEEEHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCHHHHH--HHHHHHHcCCEEEee
Confidence 467788875432 122 235689998887766665533212467899999999998764433 589999999999888
Q ss_pred C-CCCHHHHHHHHHhcCceeeecch
Q 014952 260 Q-KFDIVKLMELVQKYKVTVAPFVP 283 (415)
Q Consensus 260 ~-~~~~~~~~~~l~~~~~t~l~~~p 283 (415)
+ .+.++.+...++..++.+++...
T Consensus 170 ~~~~~~~~l~~~l~~~~~~~li~~~ 194 (663)
T 1ry2_A 170 FAGFSSNSLRDRINDGDSKVVITTD 194 (663)
T ss_dssp CTTSCHHHHHHHHHHHTCSEEEEES
T ss_pred CCCCCHHHHHHHHHhcCCeEEEEcc
Confidence 6 47889999999999999988754
No 54
>2v7b_A Benzoate-coenzyme A ligase; benzoate oxidation, benzoate COA ligase; 1.84A {Burkholderia xenovorans}
Probab=77.86 E-value=5.9 Score=37.78 Aligned_cols=96 Identities=14% Similarity=0.070 Sum_probs=71.0
Q ss_pred CCCCeEEEecCCCCCCCCceeeechHHHHHHHhhhhcCCCCCccCCCCcEEEEccchHHHHhhHHHHHHHHHcCcEEEEc
Q 014952 180 NPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIM 259 (415)
Q Consensus 180 ~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~l~~l~~G~~~v~~ 259 (415)
.++.+|++.. +..+|...+...+..+...+. ..+..+++++...++-+..+- ..+++++..|+..+..
T Consensus 36 ~p~~~A~~~~---------~~~~Ty~el~~~~~~lA~~L~-~~Gv~~gd~V~i~~~n~~~~~--~~~lA~~~~G~~~vpl 103 (529)
T 2v7b_A 36 RAGKTAYIDD---------TGSTTYGELEERARRFASALR-TLGVHPEERILLVMLDTVALP--VAFLGALYAGVVPVVA 103 (529)
T ss_dssp GTTSEEEECS---------SCEEEHHHHHHHHHHHHHHHH-HTTCCTTCEEEEECCSSTHHH--HHHHHHHHHTCEEEEC
T ss_pred cCCceEEEeC---------CCCccHHHHHHHHHHHHHHHH-HcCCCCCCEEEEEcCCcHHHH--HHHHHHHHcCceEEec
Confidence 4567777632 135899888877666655433 346788999999988765433 3578999999999988
Q ss_pred CC-CCHHHHHHHHHhcCceeeecchHHHH
Q 014952 260 QK-FDIVKLMELVQKYKVTVAPFVPPIVL 287 (415)
Q Consensus 260 ~~-~~~~~~~~~l~~~~~t~l~~~p~~l~ 287 (415)
+. ..++.+...+++.++.+++..+....
T Consensus 104 ~~~~~~~~l~~~l~~~~~~~vi~~~~~~~ 132 (529)
T 2v7b_A 104 NTLLTPADYVYMLTHSHARAVIASGALVQ 132 (529)
T ss_dssp CTTCCHHHHHHHHHHHTCSEEEEEGGGHH
T ss_pred CcccCHHHHHHHHhccCCeEEEechhhhh
Confidence 65 67888999999999999988766543
No 55
>3r44_A Fatty acyl COA synthetase FADD13 (fatty-acyl-COA synthetase); ligase; HET: HIS; 1.80A {Mycobacterium tuberculosis} PDB: 3t5c_A 3t5b_A
Probab=77.79 E-value=7.9 Score=36.81 Aligned_cols=97 Identities=13% Similarity=0.138 Sum_probs=71.9
Q ss_pred CCCCeEEEecCCCCCCCCceeeechHHHHHHHhhhhcCCCCCccCCCCcEEEEccchHHHHhhHHHHHHHHHcCcEEEEc
Q 014952 180 NPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIM 259 (415)
Q Consensus 180 ~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~l~~l~~G~~~v~~ 259 (415)
.++.+|++.. + +...+|...+...+..+...+. ..++.+++++...+|-+.-+- ..+++++..|+..+.+
T Consensus 29 ~p~~~A~~~~--~-----~~~~~Ty~eL~~~~~~lA~~L~-~~Gv~~gd~V~i~~~~~~~~~--~~~lA~~~~G~~~vpl 98 (517)
T 3r44_A 29 SPRLQAYVEP--S-----TDVRMTYAQMNALANRCADVLT-ALGIAKGDRVALLMPNSVEFC--CLFYGAAKLGAVAVPI 98 (517)
T ss_dssp STTSEEEEEG--G-----GTEEEEHHHHHHHHHHHHHHHH-HTTCCTTCEEEEECCSSHHHH--HHHHHHHHHTCEEEEC
T ss_pred CCCCeEEEeC--C-----cCceeeHHHHHHHHHHHHHHHH-HcCCCCcCEEEEEcCCCHHHH--HHHHHHHHhCcEEEec
Confidence 5677777653 1 2346899988877666655443 346789999999998765433 3589999999999988
Q ss_pred CC-CCHHHHHHHHHhcCceeeecchHHH
Q 014952 260 QK-FDIVKLMELVQKYKVTVAPFVPPIV 286 (415)
Q Consensus 260 ~~-~~~~~~~~~l~~~~~t~l~~~p~~l 286 (415)
++ ...+++...++..++.+++......
T Consensus 99 ~~~~~~~~l~~~l~~~~~~~vi~~~~~~ 126 (517)
T 3r44_A 99 NTRLAAPEVSFILSDSGSKVVIYGAPSA 126 (517)
T ss_dssp CTTSCHHHHHHHHHHHTCSEEEECGGGH
T ss_pred CcccCHHHHHHHHHhcCceEEEECCchH
Confidence 75 6788899999999999988765443
No 56
>1amu_A GRSA, gramicidin synthetase 1; peptide synthetase, adenylate forming; HET: PHE AMP; 1.90A {Brevibacillus brevis} SCOP: e.23.1.1
Probab=76.44 E-value=9.2 Score=36.87 Aligned_cols=97 Identities=12% Similarity=0.062 Sum_probs=71.4
Q ss_pred CCCCeEEEecCCCCCCCCceeeechHHHHHHHhhhhcCCCCCccCCCCcEEEEccchHHHHhhHHHHHHHHHcCcEEEEc
Q 014952 180 NPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIM 259 (415)
Q Consensus 180 ~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~l~~l~~G~~~v~~ 259 (415)
.++.+|++.. ...+|.+.+...+..+...+. ..++.+++++...++-+.-+ ...+++++..|+..+.+
T Consensus 52 ~p~~~Al~~~---------~~~~Ty~eL~~~~~~lA~~L~-~~Gv~~gd~V~i~~~n~~e~--~~~~lA~~~~Gav~vpl 119 (563)
T 1amu_A 52 RPNNVAIVCE---------NEQLTYHELNVKANQLARIFI-EKGIGKDTLVGIMMEKSIDL--FIGILAVLKAGGAYVPI 119 (563)
T ss_dssp CTTSEEEEET---------TEEEEHHHHHHHHHHHHHHHH-HTTCCTTCEEEEECCSSHHH--HHHHHHHHHTTCEEEEC
T ss_pred CCCCeEEEeC---------CceecHHHHHHHHHHHHHHHH-HcCCCCCCEEEEEeCCCHHH--HHHHHHHHHhCCEEEEe
Confidence 4677777641 236899888776665555332 34678999999998876533 33588999999999988
Q ss_pred CC-CCHHHHHHHHHhcCceeeecchHHHHH
Q 014952 260 QK-FDIVKLMELVQKYKVTVAPFVPPIVLA 288 (415)
Q Consensus 260 ~~-~~~~~~~~~l~~~~~t~l~~~p~~l~~ 288 (415)
++ ...+.+...++..++.+++..+.....
T Consensus 120 ~~~~~~~~l~~il~~~~~~~li~~~~~~~~ 149 (563)
T 1amu_A 120 DIEYPKERIQYILDDSQARMLLTQKHLVHL 149 (563)
T ss_dssp CTTSCHHHHHHHHHHHTCSEEEECGGGHHH
T ss_pred CCCCcHHHHHHHHHhcCCCEEEEcCchhhh
Confidence 75 678889999999999999887755443
No 57
>1pg4_A Acetyl-COA synthetase; AMP-forming, adenylate-forming, thioester-forming, ligase; HET: COA PRX; 1.75A {Salmonella enterica} SCOP: e.23.1.1 PDB: 1pg3_A* 2p2f_A* 2p2b_A* 2p2q_A* 2p2j_A* 2p20_A* 2p2m_A*
Probab=76.37 E-value=8.8 Score=37.81 Aligned_cols=98 Identities=15% Similarity=0.179 Sum_probs=72.2
Q ss_pred CCCCeEEEecCCCCCCCCceeeechHHHHHHHhhhhcCCCCCccCCCCcEEEEccchHHHHhhHHHHHHHHHcCcEEEEc
Q 014952 180 NPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIM 259 (415)
Q Consensus 180 ~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~l~~l~~G~~~v~~ 259 (415)
.++.+|++.... .+| ....+|...+...+..+...+. ..++.++|++..++|.+.-+-. .+++++..|+..+.+
T Consensus 89 ~pd~~Al~~~~~-~~~--~~~~lTY~eL~~~v~~lA~~L~-~~Gv~~Gd~V~i~~~~~~e~vv--a~lA~~~~Gav~vpl 162 (652)
T 1pg4_A 89 NGDRTAIIWEGD-DTS--QSKHISYRELHRDVCRFANTLL-DLGIKKGDVVAIYMPMVPEAAV--AMLACARIGAVHSVI 162 (652)
T ss_dssp HTTSEEEEEECS-STT--CEEEEEHHHHHHHHHHHHHHHH-HHTCCTTCEEEEECCSSHHHHH--HHHHHHHHTCEEEEC
T ss_pred CCCceEEEEEcC-CCC--ceeEEeHHHHHHHHHHHHHHHH-HcCCCCCCEEEEEeCCCHHHHH--HHHHHHHcCcEEEec
Confidence 467788775321 122 3456899998877766665443 4568899999999987754433 589999999999888
Q ss_pred C-CCCHHHHHHHHHhcCceeeecch
Q 014952 260 Q-KFDIVKLMELVQKYKVTVAPFVP 283 (415)
Q Consensus 260 ~-~~~~~~~~~~l~~~~~t~l~~~p 283 (415)
+ .+.++.+...++..++.+++...
T Consensus 163 ~~~~~~~~l~~~l~~~~~~~li~~~ 187 (652)
T 1pg4_A 163 FGGFSPEAVAGCIIDSSSRLVITAD 187 (652)
T ss_dssp CTTSCHHHHHHHHHHHTCSEEEEES
T ss_pred CCCCCHHHHHHHHHhcCCCEEEEcC
Confidence 6 47889999999999998887743
No 58
>3etc_A AMP-binding protein; adenylate-forming acyl-COA synthetase ligase, ligase; HET: PGE 1PE EPE; 2.10A {Methanosarcina acetivorans}
Probab=75.23 E-value=9.1 Score=37.06 Aligned_cols=98 Identities=12% Similarity=0.102 Sum_probs=73.2
Q ss_pred CCCCCeEEEecCCCCCCCCceeeechHHHHHHHhhhhcCCCCCccCCCCcEEEEccchHHHHhhHHHHHHHHHcCcEEEE
Q 014952 179 INPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILI 258 (415)
Q Consensus 179 ~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~l~~l~~G~~~v~ 258 (415)
..++.+|++.... .| ....+|...+......+...+. ..+++++|++...+|-+.-+ +..+++++..|+..+.
T Consensus 68 ~~pd~~Al~~~~~--~g--~~~~~Ty~eL~~~~~~~A~~L~-~~Gv~~Gd~V~l~~~~~~e~--~~~~lA~~~~Gav~vp 140 (580)
T 3etc_A 68 DSPEKLAMIWCDD--YG--NEKIFTFKDLKYYSDKAANFFV-KHGIGKGDYVMLTLKSRYDF--WYCMLGLHKLGAIAVP 140 (580)
T ss_dssp HCTTCEEEEEEES--SS--CEEEEEHHHHHHHHHHHHHHHH-HTTCCTTCEEEEECTTCTHH--HHHHHHHHHHTCEEEE
T ss_pred hCCCCEEEEEEcC--CC--CEeEEeHHHHHHHHHHHHHHHH-HcCCCCCCEEEEEcCCCHHH--HHHHHHHHhCCEEEEe
Confidence 3578888876432 12 3467899988877666655443 45788999999998876543 3358899999999998
Q ss_pred cCC-CCHHHHHHHHHhcCceeeecch
Q 014952 259 MQK-FDIVKLMELVQKYKVTVAPFVP 283 (415)
Q Consensus 259 ~~~-~~~~~~~~~l~~~~~t~l~~~p 283 (415)
+++ ..++.+...+++.++.+++...
T Consensus 141 l~~~~~~~~l~~~l~~~~~~~ii~~~ 166 (580)
T 3etc_A 141 ATHMLKTRDIVYRIEKAGLKMIVCIA 166 (580)
T ss_dssp CCTTCCHHHHHHHHHHHTCCEEEEES
T ss_pred CCccCCHHHHHHHHHhcCCCEEEEec
Confidence 865 6888899999999999988754
No 59
>3rix_A Luciferase, luciferin 4-monooxygenase; oxidoreductase, photoprotein, luminescence, aspulvinone, natural product extracts; HET: 923; 1.70A {Photinus pyralis} SCOP: e.23.1.1 PDB: 1ba3_A 1lci_A* 4e5d_A* 3ies_A* 3iep_A* 3ier_A* 4g36_A* 4g37_A* 3qya_A
Probab=74.87 E-value=14 Score=35.40 Aligned_cols=101 Identities=8% Similarity=-0.022 Sum_probs=71.2
Q ss_pred CCCcEEEeCCCC-------CeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCch-hHHHHHHHHHHhCCeEeecCCC
Q 014952 39 ADRPCIINGPTG-------DVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCP-QFVFAFLGASYIGATSTTANPF 110 (415)
Q Consensus 39 p~~~a~~~~~~~-------~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~-~~~~~~lA~~~~G~~~v~l~~~ 110 (415)
++.++++...+| ..+|.+.+...+......+...++.++|++...++-.- -.+...++.+..|+..+... .
T Consensus 189 ~~d~a~i~~TSGTTG~PKgV~~th~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~l~~G~~~~~~~-~ 267 (550)
T 3rix_A 189 DKTIALIMNSSGSTGLPKGVALPHRTACVRFSHARDPIFGNQIIPDTAILSVVPFHHGFGMFTTLGYLICGFRVVLMY-R 267 (550)
T ss_dssp TTSEEEEEEC-----CCCEEEEEHHHHHHHHHHHTCTTTSCCCCTTCEEEECSCTTSHHHHHHHHHHHHHTCEEEECS-S
T ss_pred CCCEEEEEECCCcccCcchhhhhHHHHHHHHHHhhhhhccccCCCCcEEEEechHHHHHHHHHHHHHHHcCCEEEEeC-C
Confidence 356676644333 46899888766555444433357889999988888542 23445677788999988775 4
Q ss_pred CCHHHHHHHHHhcCceEEEEcccchHHHHh
Q 014952 111 YTPPEIAKQAIASKAKIIITQAVYNDKVRD 140 (415)
Q Consensus 111 ~~~~~~~~~l~~~~~~~vl~~~~~~~~~~~ 140 (415)
...+.+...+++.++.+++........+..
T Consensus 268 ~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~ 297 (550)
T 3rix_A 268 FEEELFLRSLQDYKIQSALLVPTLFSFFAK 297 (550)
T ss_dssp CCHHHHHHHHHHTTCSEEEECHHHHHHHHH
T ss_pred CCHHHHHHHHHHcCCeEEEeCcHHHHHHHh
Confidence 678899999999999999998877766544
No 60
>3fce_A D-alanine--poly(phosphoribitol) ligase subunit 1; DLTA, AMP-forming domain, adenylation, D-alanine protein ligase, ATP complex; HET: ATP; 1.90A {Bacillus cereus} PDB: 3fcc_A* 3dhv_A*
Probab=73.62 E-value=13 Score=35.25 Aligned_cols=99 Identities=13% Similarity=0.087 Sum_probs=71.8
Q ss_pred CCCCcEEEeCCCC-------CeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchh-HHHHHHHHHHhCCeEeecCC
Q 014952 38 FADRPCIINGPTG-------DVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQ-FVFAFLGASYIGATSTTANP 109 (415)
Q Consensus 38 ~p~~~a~~~~~~~-------~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~-~~~~~lA~~~~G~~~v~l~~ 109 (415)
.++.++++...+| ..+|++.+...+...... .++.++|++....+-+.. .+..+++.+..|+..+.+++
T Consensus 142 ~~~d~a~i~~TSGTTG~PKgv~~th~~l~~~~~~~~~~---~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~~~ 218 (512)
T 3fce_A 142 KGDENFYIIYTSGSTGNPKGVQITYNCLVSFTKWAVED---FNLQTGQVFLNQAPFSFDLSVMDIYPSLVTGGTLWAIDK 218 (512)
T ss_dssp CTTSEEEEEEECC----CEEEEEEHHHHHHHHHHHHHH---TTCCSSCEEEECSCTTSGGGHHHHHHHHHTTCEEEECCH
T ss_pred CCCCeEEEEECCCCCCCCceEEEehHHHHHHHHHHHHh---cCCCCCCEEEEeCCccHhHHHHHHHHHHhCCCEEEECCH
Confidence 4567777644333 468999887766655443 478899999998885432 34457888889999888765
Q ss_pred C--CCHHHHHHHHHhcCceEEEEcccchHHHH
Q 014952 110 F--YTPPEIAKQAIASKAKIIITQAVYNDKVR 139 (415)
Q Consensus 110 ~--~~~~~~~~~l~~~~~~~vl~~~~~~~~~~ 139 (415)
. ...+.+...+++.++.++.........+.
T Consensus 219 ~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~ 250 (512)
T 3fce_A 219 DMIARPKDLFASLEQSDIQVWTSTPSFAEMCL 250 (512)
T ss_dssp HHHHSHHHHHHHHHHHCCCEEEECHHHHHHHT
T ss_pred HHhhCHHHHHHHHHHcCCcEEEecHHHHHHHH
Confidence 3 45778889999999999998877665543
No 61
>4gr5_A Non-ribosomal peptide synthetase; MBTH-like domain, adenylation domain, ligase, rossmann fold, binding; HET: APC TLA; 1.92A {Streptomyces lydicus} PDB: 4gr4_A
Probab=73.16 E-value=11 Score=36.28 Aligned_cols=95 Identities=17% Similarity=0.141 Sum_probs=71.2
Q ss_pred CCCCCeEEEecCCCCCCCCceeeechHHHHHHHhhhhcCCCCCccCCCCcEEEEccchHHHHhhHHHHHHHHHcCcEEEE
Q 014952 179 INPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILI 258 (415)
Q Consensus 179 ~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~l~~l~~G~~~v~ 258 (415)
..++.+|++.. .-.+|.+.+...+..+...+. ..++.+++++...++-+.-+-. .+++++..|+..+.
T Consensus 87 ~~pd~~A~~~~---------~~~~Ty~el~~~~~~lA~~L~-~~Gv~~gd~V~i~~~n~~~~~~--~~lA~~~~G~~~vp 154 (570)
T 4gr5_A 87 RAPDAVALLHE---------ADELTYGALNERANRLAHRLV-GLGVAPGTLVGVHLERGFDMVV--ALLAVLKAGGGYTM 154 (570)
T ss_dssp HCTTSEEEEET---------TEEEEHHHHHHHHHHHHHHHH-HTTCCTTCEEEEECCSSHHHHH--HHHHHHHTTCEEEE
T ss_pred HCCCCeEEECC---------CCcEeHHHHHHHHHHHHHHHH-HcCCCCCCEEEEEeCCCHHHHH--HHHHHHHHCCEEEE
Confidence 35677777641 235899988877766665443 3467899999999887654433 58999999999998
Q ss_pred cCC-CCHHHHHHHHHhcCceeeecchHH
Q 014952 259 MQK-FDIVKLMELVQKYKVTVAPFVPPI 285 (415)
Q Consensus 259 ~~~-~~~~~~~~~l~~~~~t~l~~~p~~ 285 (415)
+++ ...+.+...++..++.+++.....
T Consensus 155 l~~~~~~~~l~~~l~~~~~~~~i~~~~~ 182 (570)
T 4gr5_A 155 LDPQFPVERLALSLEDTGAPLLVTSRPL 182 (570)
T ss_dssp CCTTSCHHHHHHHHHHHTCSEEEECTTT
T ss_pred cCCCChHHHHHHHHHhcCCCEEEecchh
Confidence 875 678899999999999998876543
No 62
>3e7w_A D-alanine--poly(phosphoribitol) ligase subunit 1; DLTA, non-ribosomal peptide synthetase, NRPS, adenylation domain, D-alanylation; HET: AMP; 2.28A {Bacillus subtilis} PDB: 3e7x_A*
Probab=71.58 E-value=16 Score=34.53 Aligned_cols=100 Identities=11% Similarity=0.038 Sum_probs=71.7
Q ss_pred CCCCcEEEeCCCC-------CeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchh-HHHHHHHHHHhCCeEeecCC
Q 014952 38 FADRPCIINGPTG-------DVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQ-FVFAFLGASYIGATSTTANP 109 (415)
Q Consensus 38 ~p~~~a~~~~~~~-------~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~-~~~~~lA~~~~G~~~v~l~~ 109 (415)
.++.++++...+| ..+|.+.+...+..++.. .++.++|++....+-+.. .+..+++++..|+..+..+.
T Consensus 141 ~~~~~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~---~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~~~ 217 (511)
T 3e7w_A 141 KEHETFYIIYTSGSTGNPKGVQISAANLQSFTDWICAD---FPVSGGKIFLNQAPFSFDLSVMDLYPCLQSGGTLHCVTK 217 (511)
T ss_dssp CTTSEEEEEEECCTTSSCEEEEEEHHHHHHHHHHHHHH---STTTTTCEEEECSCTTSTHHHHHHHHHHHTTCEEEECCH
T ss_pred CCCCeEEEEECCCCCCCCCEEEEcHHHHHHHHHHHHHh---cCCCccceEEEeCCccHHHHHHHHHHHHhcCCEEEEcCh
Confidence 3566777643332 468999887776655443 478899999988885533 34457888889999887764
Q ss_pred C--CCHHHHHHHHHhcCceEEEEcccchHHHHh
Q 014952 110 F--YTPPEIAKQAIASKAKIIITQAVYNDKVRD 140 (415)
Q Consensus 110 ~--~~~~~~~~~l~~~~~~~vl~~~~~~~~~~~ 140 (415)
. .....+...+.+.++.+++........+..
T Consensus 218 ~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~ 250 (511)
T 3e7w_A 218 DAVNKPKVLFEELKKSGLNVWTSTPSFVQMCLM 250 (511)
T ss_dssp HHHHSHHHHHHHHHHHCCSEEEECHHHHHHHHT
T ss_pred hhhcCHHHHHHHHHHcCCcEEEecHHHHHHHHh
Confidence 3 456788889999999999988877665543
No 63
>3kxw_A Saframycin MX1 synthetase B; fatty acid AMP ligase, SGX, acyl adenylate, structural genom 2, protein structure initiative; HET: 1ZZ; 1.85A {Legionella pneumophila subsp} PDB: 3lnv_A*
Probab=71.50 E-value=15 Score=35.34 Aligned_cols=103 Identities=11% Similarity=0.013 Sum_probs=74.9
Q ss_pred CCCCeEEEecCCCCCCCCceeeechHHHHHHHhhhhcCCCCCccCCCCcEEEEccchHHHHhhHHHHHHHHHcCcEEEEc
Q 014952 180 NPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIM 259 (415)
Q Consensus 180 ~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~l~~l~~G~~~v~~ 259 (415)
.++.+|++.... .....+|...+...+..+...+. ..++.+++++...++-+..+- ..+++++..|+..+.+
T Consensus 24 ~p~~~a~~~~~~-----~~~~~~Ty~eL~~~~~~lA~~L~-~~gv~~gd~V~i~~~~~~~~~--~~~lA~~~~G~~~vpl 95 (590)
T 3kxw_A 24 SPNKKSCTFLNK-----ELEETMTYEQLDQHAKAIAATLQ-AEGAKPGDRVLLLFAPGLPLI--QAFLGCLYAGCIAVPI 95 (590)
T ss_dssp CTTSEEEEEEET-----TEEEEEEHHHHHHHHHHHHHHHH-HTTCCTTCEEEEECCSSHHHH--HHHHHHHHTTCEEEEE
T ss_pred CCCCeEEEEEcC-----CeeEEEcHHHHHHHHHHHHHHHH-HcCCCCCCEEEEEcCCchhHH--HHHHHHHHhCcEEEEe
Confidence 567777765431 13457899999877766655443 346789999999988765433 3589999999999988
Q ss_pred CCC----CHHHHHHHHHhcCceeeecchHHHHHHH
Q 014952 260 QKF----DIVKLMELVQKYKVTVAPFVPPIVLAVA 290 (415)
Q Consensus 260 ~~~----~~~~~~~~l~~~~~t~l~~~p~~l~~l~ 290 (415)
++. ..+.+...++..++.++.........+.
T Consensus 96 ~~~~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~ 130 (590)
T 3kxw_A 96 YPPAQEKLLDKAQRIVTNSKPVIVLMIADHIKKFT 130 (590)
T ss_dssp CCCCSHHHHHHHHHHHHHHCCSEEEECHHHHHHHC
T ss_pred cCCCchHHHHHHHHHHHhCCCCEEEeCHHHHHHHH
Confidence 753 3467788889999999998887776553
No 64
>3rg2_A Enterobactin synthase component E (ENTE), 2,3-DIH dihydroxybenzoate synthetase, isochroismatase...; adenylate-forming enzymes, ANL superfamily; HET: SVS PNS; 3.10A {Escherichia coli}
Probab=71.20 E-value=38 Score=32.90 Aligned_cols=99 Identities=11% Similarity=-0.053 Sum_probs=72.0
Q ss_pred CCCCcEEEeCCCC-------CeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCc--hhHHH-HHHHHHHhCCeEeec
Q 014952 38 FADRPCIINGPTG-------DVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNC--PQFVF-AFLGASYIGATSTTA 107 (415)
Q Consensus 38 ~p~~~a~~~~~~~-------~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~--~~~~~-~~lA~~~~G~~~v~l 107 (415)
.++.+|++...+| ..+|.+.+...+......+ ++.++|++....+-. .+... .+++.+..|+..+..
T Consensus 182 ~~~~~a~ii~TSGSTG~PKgV~~th~~~~~~~~~~~~~~---~~~~~~~~l~~~p~~~~~~~~~~~~~~~l~~G~~~v~~ 258 (617)
T 3rg2_A 182 PADEVAYFQLSGGTTGTPKLIPRTHNDYYYSVRRSVEIC---QFTQQTRYLCAIPAAHNYAMSSPGSLGVFLAGGTVVLA 258 (617)
T ss_dssp CTTSEEEEEECCCSSSSCCEEEEEHHHHHHHHHHHHHHH---TCCTTCEEEECSCTTSHHHHHSSHHHHHHHHTCEEEEC
T ss_pred CCCCeEEEEECCCcCCCCCEeehhHHHHHHHHHHHHHhc---CCCCcceEEEeccchhhhhhhHHHHHHHHHcCCEEEEe
Confidence 3577777644333 4689998887776665544 788999999988844 33332 478888899988876
Q ss_pred CCCCCHHHHHHHHHhcCceEEEEcccchHHHHh
Q 014952 108 NPFYTPPEIAKQAIASKAKIIITQAVYNDKVRD 140 (415)
Q Consensus 108 ~~~~~~~~~~~~l~~~~~~~vl~~~~~~~~~~~ 140 (415)
+. .....+...+.+.++.++.........+..
T Consensus 259 ~~-~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~ 290 (617)
T 3rg2_A 259 AD-PSATLCFPLIEKHQVNVTALVPPAVSLWLQ 290 (617)
T ss_dssp SS-CCHHHHHHHHHHTTCCEEEECHHHHHHHHH
T ss_pred CC-CCHHHHHHHHHHhCCcEEEcchHHHHHHHH
Confidence 54 567788889999999999988876665543
No 65
>3tbh_A O-acetyl serine sulfhydrylase; cysteine synthase, type II PLP dependent enzyme, serine ACET transferase; HET: LLP; 1.68A {Leishmania donovani} PDB: 3spx_A* 3t4p_A* 4air_A*
Probab=69.91 E-value=22 Score=31.63 Aligned_cols=92 Identities=14% Similarity=-0.068 Sum_probs=59.8
Q ss_pred CCcEEEeCCCCCeeeHHHHHHHHHHHHHHHHHcCC-CCCCEEEEEcCCchhHHHHHHHHHHhCCeEeecCCCCCHHHHHH
Q 014952 40 DRPCIINGPTGDVYTYADVELTSRKVAAGLSKLGV-QKGDVIMLLLQNCPQFVFAFLGASYIGATSTTANPFYTPPEIAK 118 (415)
Q Consensus 40 ~~~a~~~~~~~~~~Ty~el~~~~~~~a~~L~~~g~-~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~ 118 (415)
.++.+-.++.+.+-+++.-.. ...+ ....+.|. ++|+.|.+....+-.-..+.+++.+.|..++.+-|...+.....
T Consensus 35 ~~i~~K~E~~~ptGSfK~R~a-~~~i-~~a~~~g~l~~g~~vvv~aSsGN~g~alA~aa~~~G~~~~iv~p~~~~~~k~~ 112 (334)
T 3tbh_A 35 AKVVLKMECENPMASVKDRLG-FAIY-DKAEKEGKLIPGKSIVVESSSGNTGVSLAHLGAIRGYKVIITMPESMSLERRC 112 (334)
T ss_dssp SEEEEEEGGGSTTSBTHHHHH-HHHH-HHHHHTTSCCTTTCEEEEECSSHHHHHHHHHHHHHTCEEEEEEETTSCHHHHH
T ss_pred CEEEEEeCCCCCccCcHHHHH-HHHH-HHHHHcCCCCCCCeEEEEeCCCHHHHHHHHHHHHhCCCEEEEECCCCCHHHHH
Confidence 345554443344446655322 1222 33344554 88888645555566777778888888988877767666667778
Q ss_pred HHHhcCceEEEEccc
Q 014952 119 QAIASKAKIIITQAV 133 (415)
Q Consensus 119 ~l~~~~~~~vl~~~~ 133 (415)
.++..++++++++..
T Consensus 113 ~~~~~GA~V~~~~~~ 127 (334)
T 3tbh_A 113 LLRIFGAEVILTPAA 127 (334)
T ss_dssp HHHHTTCEEEEECGG
T ss_pred HHHHCCCEEEEECCC
Confidence 889999999999764
No 66
>4gs5_A Acyl-COA synthetase (AMP-forming)/AMP-acid ligase protein; structural genomics, PSI-biology; 2.02A {Dyadobacter fermentans}
Probab=69.79 E-value=21 Score=31.92 Aligned_cols=104 Identities=10% Similarity=0.063 Sum_probs=66.7
Q ss_pred HhHHHhhhccCCCCcEEE---eCCCC----CeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCc-hhHHHHHHHHHH
Q 014952 28 HTYCFENISQFADRPCII---NGPTG----DVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNC-PQFVFAFLGASY 99 (415)
Q Consensus 28 ~~~l~~~a~~~p~~~a~~---~~~~~----~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~-~~~~~~~lA~~~ 99 (415)
.+.+.++.. +.+|++ .+..+ ..+|++.+...+..++.. .+++++|++...+|-. .-.+..++..+.
T Consensus 28 ~~~~~~w~~---d~~a~Il~TSGTTG~PKgV~~th~~l~~~~~~~~~~---~~~~~~d~~l~~~pl~h~~gl~~~~~~l~ 101 (358)
T 4gs5_A 28 YDFMEKWLG---GAREFVLHTSGSTGMPKPITVTRAQLAASAAMTGKA---LSLGPGTRALVCLNVGYIAGLMMLVRGME 101 (358)
T ss_dssp HHHHHHHHH---TCSEEEEEEECTTSSEEEEEEEHHHHHHHHHHHHHH---TTCCTTCEEEECSCTTSHHHHHHHHHHHH
T ss_pred hhHhhccCC---CCCEEEEECCcccccCcEEEEeHHHHHHHHHHHHHH---hCCCCCCEEEEECChHHHHHHHHHHHHHH
Confidence 344444433 455554 33223 468999988777665544 4889999999888854 233445566677
Q ss_pred hCCeEeecCCCCCHHHHHHHHHhcCceEEEEcccchHHHHh
Q 014952 100 IGATSTTANPFYTPPEIAKQAIASKAKIIITQAVYNDKVRD 140 (415)
Q Consensus 100 ~G~~~v~l~~~~~~~~~~~~l~~~~~~~vl~~~~~~~~~~~ 140 (415)
.|+..+..++... ....+++.++.++.........+.+
T Consensus 102 ~g~~~~~~~~~~~---~~~~i~~~~~t~~~~~P~~l~~ll~ 139 (358)
T 4gs5_A 102 LDWELTVTEPTAN---PLAGLDHADFDFVAMVPMQLQSILE 139 (358)
T ss_dssp HTCEEEEECCCSC---TTTTCSSCCCSEEEECHHHHHHHHH
T ss_pred hCcEEEecCcccc---HHHHHHHhCCeEEEcChHHHHHhhc
Confidence 8888777765432 2345777888888887776655543
No 67
>3tsy_A Fusion protein 4-coumarate--COA ligase 1, resvera synthase; transferase; 3.10A {Arabidospis thaliana}
Probab=68.72 E-value=15 Score=38.08 Aligned_cols=98 Identities=14% Similarity=0.101 Sum_probs=73.1
Q ss_pred CCCCCeEEEecCCCCCCCCceeeechHHHHHHHhhhhcCCCCCccCCCCcEEEEccchHHHHhhHHHHHHHHHcCcEEEE
Q 014952 179 INPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILI 258 (415)
Q Consensus 179 ~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~l~~l~~G~~~v~ 258 (415)
..++.+|++...+ +..+|...+......+...+. ..++.++|++...+|-+.-+ ...+++++..|+..+.
T Consensus 73 ~~pd~~Al~~~~~-------~~~~TY~eL~~~~~~lA~~L~-~~Gv~~gd~V~i~~~ns~e~--~v~~lA~~~~Ga~~vp 142 (979)
T 3tsy_A 73 EFATKPCLINGPT-------GHVYTYSDVHVISRQIAANFH-KLGVNQNDVVMLLLPNCPEF--VLSFLAASFRGATATA 142 (979)
T ss_dssp GTTTSEEEEETTT-------CCEEEHHHHHHHHHHHHHHHH-HTTCCTTCEEEEECSSCHHH--HHHHHHHHHHTCEEEE
T ss_pred hCCCCeEEEECCC-------CcEEEHHHHHHHHHHHHHHHH-HcCCCCcCEEEEEeCCCHHH--HHHHHHHHHcCCEEEe
Confidence 4578888775322 246789888876666655443 35678999999998876433 3358999999999998
Q ss_pred cCC-CCHHHHHHHHHhcCceeeecchHHH
Q 014952 259 MQK-FDIVKLMELVQKYKVTVAPFVPPIV 286 (415)
Q Consensus 259 ~~~-~~~~~~~~~l~~~~~t~l~~~p~~l 286 (415)
+++ ..++.+...++..++.+++......
T Consensus 143 l~~~~~~~~l~~~l~~~~~~~vi~~~~~~ 171 (979)
T 3tsy_A 143 ANPFFTPAEIAKQAKASNTKLIITEARYV 171 (979)
T ss_dssp ECTTSCHHHHHHHHHHHTEEEEEECSTTT
T ss_pred eCCCCCHHHHHHHHHHcCCeEEEEChHHH
Confidence 864 7888999999999999998876543
No 68
>4fuq_A Malonyl COA synthetase; ANL superfamily, methylma malonate, ligase; HET: MSE; 1.70A {Rhodopseudomonas palustris} PDB: 4fut_A* 4gxr_A* 4gxq_A*
Probab=67.99 E-value=11 Score=35.74 Aligned_cols=82 Identities=12% Similarity=0.088 Sum_probs=63.8
Q ss_pred eeechHHHHHHHhhhhcCCCCCccCCCCcEEEEccchHHHHhhHHHHHHHHHcCcEEEEcCC-CCHHHHHHHHHhcCcee
Q 014952 200 VMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIMQK-FDIVKLMELVQKYKVTV 278 (415)
Q Consensus 200 v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~l~~l~~G~~~v~~~~-~~~~~~~~~l~~~~~t~ 278 (415)
..+|...+...+..+...+. ..++.++|++...++-+..+- ..+++++..|+..+..++ ...+++...++..++.+
T Consensus 27 ~~~Ty~eL~~~~~~lA~~L~-~~Gv~~gd~V~i~~~~~~~~~--~~~lA~~~~Ga~~vpl~~~~~~~~l~~il~~~~~~~ 103 (503)
T 4fuq_A 27 DKISYAELVARAGRVANVLV-ARGLQVGDRVAAQTEKSVEAL--VLYLATVRAGGVYLPLNTAYTLHELDYFITDAEPKI 103 (503)
T ss_dssp CEEEHHHHHHHHHHHHHHHH-HTTCCTTCEEEEECCSCHHHH--HHHHHHHHTTCEEEECCTTCCHHHHHHHHHHHCCSE
T ss_pred cEEEHHHHHHHHHHHHHHHH-HcCCCCCCEEEEECCCCHHHH--HHHHHHHHcCcEEEecCCCCCHHHHHHHHHhcCCcE
Confidence 35899988877666655443 346789999999988765433 358999999999999875 67888999999999999
Q ss_pred eecchH
Q 014952 279 APFVPP 284 (415)
Q Consensus 279 l~~~p~ 284 (415)
++..+.
T Consensus 104 vi~~~~ 109 (503)
T 4fuq_A 104 VVCDPS 109 (503)
T ss_dssp EEECGG
T ss_pred EEECch
Confidence 988664
No 69
>3l8c_A D-alanine--poly(phosphoribitol) ligase subunit 1; structural genomics, DLTA, ATP-binding, cytoplasm, nucleotide-binding; 2.41A {Streptococcus pyogenes serotype M6} PDB: 3lgx_A*
Probab=65.20 E-value=15 Score=34.75 Aligned_cols=81 Identities=10% Similarity=-0.001 Sum_probs=61.2
Q ss_pred eeechHHHHHHHhhhhcCCCCCccCCCCcEEEEccchHHHHhhHHHHHHHHHcCcEEEEcCC-CCHHHHHHHHHhcCcee
Q 014952 200 VMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIMQK-FDIVKLMELVQKYKVTV 278 (415)
Q Consensus 200 v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~l~~l~~G~~~v~~~~-~~~~~~~~~l~~~~~t~ 278 (415)
-.+|...+...+..+...+. ..+..+++++...++-+.-+ ...+++++..|+..+.+++ ..++.+...++..++.+
T Consensus 28 ~~~Ty~el~~~~~~lA~~L~-~~g~~~gd~V~i~~~n~~~~--~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~~~~~~ 104 (521)
T 3l8c_A 28 ERRTYGQLKRDSDSIAAFID-SLALLAKSPVLVFGAQTYDM--LATFVALTKSGHAYIPVDVHSAPERILAIIEIAKPSL 104 (521)
T ss_dssp EEEEHHHHHHHHHHHHHHHH-HTCCCTTCCEEEEECSSHHH--HHHHHHHHHTTCCEEEEETTSCHHHHHHHHHHSCCSE
T ss_pred CeecHHHHHHHHHHHHHHHH-HcCCCCCCEEEEEeCCCHHH--HHHHHHHHHhCCEEEecCccccHHHHHHHHHhCCCCE
Confidence 35789988776666655433 34678899998888766533 3357899999999988864 67889999999999998
Q ss_pred eecch
Q 014952 279 APFVP 283 (415)
Q Consensus 279 l~~~p 283 (415)
++...
T Consensus 105 ii~~~ 109 (521)
T 3l8c_A 105 IIAIE 109 (521)
T ss_dssp EEESS
T ss_pred EEecC
Confidence 87643
No 70
>3vc3_A Beta-cyanoalnine synthase; beta-cyanoalanine synthase, transferase; HET: C6P; 1.77A {Glycine max} PDB: 3vbe_A*
Probab=60.93 E-value=35 Score=30.39 Aligned_cols=93 Identities=15% Similarity=0.048 Sum_probs=63.8
Q ss_pred CCcEEEeCCCCCeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHHhCCeEeecCCCCCHHHHHHH
Q 014952 40 DRPCIINGPTGDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGATSTTANPFYTPPEIAKQ 119 (415)
Q Consensus 40 ~~~a~~~~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~ 119 (415)
-++.+-.+.-+.+=||+.-- ..+.+.....+--+++|.+..+....+-.-..+.++|.++|..+..+-|...+......
T Consensus 50 ~~IylK~E~lnptGSfK~Rg-A~~~i~~a~~~g~l~~g~~~Vv~aSsGN~g~alA~~aa~~G~~~~IvmP~~~~~~k~~~ 128 (344)
T 3vc3_A 50 AYVAVKQEMMQPTASIADRP-AYAMITDAEEKNLITPGKTTLIEPTSGNMGISMAFMAAMKGYKMVLTMPSYTSLERRVT 128 (344)
T ss_dssp SEEEEEEGGGSTTSBTTHHH-HHHHHHHHHHTTCCCTTTCEEEEECSSHHHHHHHHHHHHHTCEEEEEEETTSCHHHHHH
T ss_pred CEEEEEecCCCCCCCcHHHH-HHHHHHHHHHcCCCCCCCCEEEEeCCcHHHHHHHHHHHHcCCcEEEEECCCChHHHHHH
Confidence 34555544334455665422 22333333333235777766667777777888889999999988888888788888889
Q ss_pred HHhcCceEEEEccc
Q 014952 120 AIASKAKIIITQAV 133 (415)
Q Consensus 120 l~~~~~~~vl~~~~ 133 (415)
++..++++++++..
T Consensus 129 ~~~~GA~Vv~v~~~ 142 (344)
T 3vc3_A 129 MRAFGAELILTDPA 142 (344)
T ss_dssp HHHTTCEEEEECGG
T ss_pred HHHcCCEEEEECCC
Confidence 99999999998754
No 71
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=60.85 E-value=39 Score=29.90 Aligned_cols=78 Identities=12% Similarity=0.039 Sum_probs=52.5
Q ss_pred eeeHHHHHHHHHHH---HHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHHhCCeEeecCCCCCHHHHHHHHHhcCceEE
Q 014952 52 VYTYADVELTSRKV---AAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGATSTTANPFYTPPEIAKQAIASKAKII 128 (415)
Q Consensus 52 ~~Ty~el~~~~~~~---a~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~v 128 (415)
.+++.|........ -+.++..++++|++|+|...-+.-..++++|....|+.++.++. + ++...++...++..+
T Consensus 136 ~~~~~~aa~l~~~~~ta~~~l~~~~~~~g~~VlV~GaG~~g~~a~~~a~~~~g~~Vi~~~~--~-~~r~~~~~~~Ga~~~ 212 (348)
T 4eez_A 136 GLDPIEASSITCAGVTTYKAIKVSGVKPGDWQVIFGAGGLGNLAIQYAKNVFGAKVIAVDI--N-QDKLNLAKKIGADVT 212 (348)
T ss_dssp TSCHHHHHHHHHHHHHHHHHHHHHTCCTTCEEEEECCSHHHHHHHHHHHHTSCCEEEEEES--C-HHHHHHHHHTTCSEE
T ss_pred CCCHHHHhhcccceeeEEeeecccCCCCCCEEEEEcCCCccHHHHHHHHHhCCCEEEEEEC--c-HHHhhhhhhcCCeEE
Confidence 35666654433332 23355568999999999998888888888887777877776654 2 333556777888887
Q ss_pred EEcc
Q 014952 129 ITQA 132 (415)
Q Consensus 129 l~~~ 132 (415)
+...
T Consensus 213 i~~~ 216 (348)
T 4eez_A 213 INSG 216 (348)
T ss_dssp EEC-
T ss_pred EeCC
Confidence 7543
No 72
>3nyq_A Malonyl-COA ligase; A/B topology ababa sandwich beta-barrel adenylate-forming EN fold; HET: MCA AMP; 1.43A {Streptomyces coelicolor} PDB: 3nyr_A*
Probab=58.14 E-value=53 Score=30.89 Aligned_cols=98 Identities=14% Similarity=0.181 Sum_probs=69.4
Q ss_pred CCCCcEEEeCCCC-------CeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCch--hHHHHHHHHHHhCCeEeecC
Q 014952 38 FADRPCIINGPTG-------DVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCP--QFVFAFLGASYIGATSTTAN 108 (415)
Q Consensus 38 ~p~~~a~~~~~~~-------~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~--~~~~~~lA~~~~G~~~v~l~ 108 (415)
.++.++++...+| ..+|.+.+...+..+...+ ++.++|++...++-.- .++..+++.+..|+..+...
T Consensus 153 ~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~---~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~ 229 (505)
T 3nyq_A 153 DDGDPALVVYTSGTTGPPKGAVIPRRALATTLDALADAW---QWTGEDVLVQGLPLFHVHGLVLGILGPLRRGGSVRHLG 229 (505)
T ss_dssp CTTSEEEEEEECCSSSSCEEEEEEHHHHHHHHHHHHHHH---TCCTTCEEEECCCTTSHHHHTTTTHHHHHHTCEEEECS
T ss_pred CCCCeEEEEeCCCCcCCCCeEEEeHHHHHHHHHHHHHHh---CCCCCcEEEEeccHHHHHHHHHHHHHHHhcCCEEEECC
Confidence 4567777644333 4689999988887776655 7888998888777432 23345788889999988775
Q ss_pred CCCCHHHHHHHHHhcCceEEEEcccchHHHHh
Q 014952 109 PFYTPPEIAKQAIASKAKIIITQAVYNDKVRD 140 (415)
Q Consensus 109 ~~~~~~~~~~~l~~~~~~~vl~~~~~~~~~~~ 140 (415)
....+.+...+ +.++.+++........+..
T Consensus 230 -~~~~~~~~~~i-~~~~t~~~~~P~~~~~l~~ 259 (505)
T 3nyq_A 230 -RFSTEGAAREL-NDGATMLFGVPTMYHRIAE 259 (505)
T ss_dssp -SCCHHHHHHHH-TTTCCEEEECHHHHHHHHH
T ss_pred -CCChHHHHHHH-hhCCeEEEehHHHHHHHHH
Confidence 45667777777 6789999888776655543
No 73
>3ezx_A MMCP 1, monomethylamine corrinoid protein 1; N terminal all helical bundle C terminal rossmann fold, cobalt, metal-binding; HET: HCB; 2.56A {Methanosarcina barkeri}
Probab=58.14 E-value=45 Score=27.36 Aligned_cols=78 Identities=15% Similarity=0.055 Sum_probs=0.0
Q ss_pred HHHhhHHHHHHHHHcCcEEEEcCC-CCHHHHHHHHHhcCceeeec------------chHHHHHHHcCCCCCCCCcccce
Q 014952 238 HIYSLNSVLLCALRVGAAILIMQK-FDIVKLMELVQKYKVTVAPF------------VPPIVLAVAKSGDVDKYDMSSIR 304 (415)
Q Consensus 238 ~~~g~~~~~l~~l~~G~~~v~~~~-~~~~~~~~~l~~~~~t~l~~------------~p~~l~~l~~~~~~~~~~l~~lr 304 (415)
|..|....-...-..|..++.... ..++.+.+.+.+++++.+.+ .+.++..+-+...+...
T Consensus 105 HdiG~~iv~~~l~~~G~~Vi~LG~~vp~e~iv~~~~~~~~d~v~l~~S~l~~~~~~~~~~~i~~l~~~~~~~~v------ 178 (215)
T 3ezx_A 105 HDIGHRLVTTMLGANGFQIVDLGVDVLNENVVEEAAKHKGEKVLLVGSALMTTSMLGQKDLMDRLNEEKLRDSV------ 178 (215)
T ss_dssp CCHHHHHHHHHHHHTSCEEEECCSSCCHHHHHHHHHHTTTSCEEEEEECSSHHHHTHHHHHHHHHHHTTCGGGS------
T ss_pred hHHHHHHHHHHHHHCCCeEEEcCCCCCHHHHHHHHHHcCCCEEEEEchhcccCcHHHHHHHHHHHHHcCCCCCC------
Q ss_pred eeeecCCCCCHHHHHHH
Q 014952 305 TVMSGAAPMGKELEDAV 321 (415)
Q Consensus 305 ~v~~gG~~l~~~~~~~~ 321 (415)
.+++||.+++++..+++
T Consensus 179 ~v~vGG~~~~~~~a~~i 195 (215)
T 3ezx_A 179 KCMFGGAPVSDKWIEEI 195 (215)
T ss_dssp EEEEESSSCCHHHHHHH
T ss_pred EEEEECCCCCHHHHHHh
No 74
>3ite_A SIDN siderophore synthetase; ligase, non-ribosomal peptide synthesis, NRPS, sidna3, fungal, endophyte; HET: MSE; 2.00A {Neotyphodium lolii}
Probab=58.13 E-value=34 Score=32.73 Aligned_cols=100 Identities=14% Similarity=0.046 Sum_probs=68.4
Q ss_pred CCCCCeEEEecCCCCCCCC--ceeeechHHHHHHHhhhhcCCCCCccCCCCcEEEEccchHHHHhhHHHHHHHHHcCcEE
Q 014952 179 INPDDVVALPYSSGTTGLP--KGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAI 256 (415)
Q Consensus 179 ~~~~~~a~i~~TSGtTG~p--K~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~l~~l~~G~~~ 256 (415)
..++.+|++... +..+.. ....+|.+.+...+..+...+. ..+. ++|++...++-+..+-. .+++++..|+..
T Consensus 32 ~~p~~~A~~~~~-~~~~~~~~~~~~~Ty~eL~~~~~~lA~~L~-~~g~-~gd~V~i~~~n~~~~~~--~~lA~~~~Gav~ 106 (562)
T 3ite_A 32 THPEWKAVEVAT-GFLGSQKIVTEDWTYKKLNETANQVANLII-HASL-HGRAIAVSLDRSLIAFA--IIVGIMKSGNTY 106 (562)
T ss_dssp HCTTSEEEEEEE-CC-----CEEEEEEHHHHHHHHHHHHHHHH-HTTC-SSCEEEEECCSCHHHHH--HHHHHHHTTCEE
T ss_pred HCCCchhhhccc-ccccccccccCCCCHHHHHHHHHHHHHHHH-hcCC-CCCEEEEEeCCCHHHHH--HHHHHHHhCCEE
Confidence 356777776543 222222 2357899988877666655332 2345 68999888887654333 589999999999
Q ss_pred EEcCC-CCHHHHHHHHHhcCceeeecch
Q 014952 257 LIMQK-FDIVKLMELVQKYKVTVAPFVP 283 (415)
Q Consensus 257 v~~~~-~~~~~~~~~l~~~~~t~l~~~p 283 (415)
+.++. ...+.+...++..++.+++...
T Consensus 107 vpl~~~~~~~~l~~~l~~~~~~~~i~~~ 134 (562)
T 3ite_A 107 VPIEAGLPNDRKSFLLRDSRAAMAFVCD 134 (562)
T ss_dssp EECCTTSCHHHHHHHHHHHTCSEEEECT
T ss_pred EecCCcCHHHHHHHHHHhcCCCEEEEcc
Confidence 98865 6788899999999988877643
No 75
>3gqw_A Fatty acid AMP ligase; FAAL, E. coli, ATP-dependent binding enzyme family,, structural genomics, PSI-2, protein structure initiative; HET: ZZ9; 3.00A {Escherichia coli O6} PDB: 3pbk_A*
Probab=54.83 E-value=25 Score=33.64 Aligned_cols=87 Identities=11% Similarity=0.036 Sum_probs=65.1
Q ss_pred eeeechHHHHHHHhhhhcCCCCCccCCCCcEEEEccchHHHHhhHHHHHHHHHcCcEEEEcCC-CC-------HHHHHHH
Q 014952 199 GVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIMQK-FD-------IVKLMEL 270 (415)
Q Consensus 199 ~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~l~~l~~G~~~v~~~~-~~-------~~~~~~~ 270 (415)
.-.+|.+.+...+..+...+. ..++.+++++...++-+.-+- ..+++++..|+..+.++. .. .+.+...
T Consensus 47 ~~~~Ty~eL~~~~~~lA~~L~-~~Gv~~gd~V~i~~~~~~~~~--~~~lA~~~~G~~~vpl~~~~~~~~~~~~~~~l~~~ 123 (576)
T 3gqw_A 47 EDQLEYQTLKARAEAGAKRLL-SLNLKKGDRVALIAETSSEFV--EAFFACQYAGLVAVPLAIPMGVGQRDSWSAKLQGL 123 (576)
T ss_dssp EEEEEHHHHHHHHHHHHHHHH-HTCCCTTCEEEEECCSSHHHH--HHHHHHHHTTCEEEEECCCSSSSSHHHHHHHHHHH
T ss_pred eeEEcHHHHHHHHHHHHHHHH-HcCCCCCCEEEEEcCCcHHHH--HHHHHHHHhCCeEeecCCCCcccchhhHHHHHHHH
Confidence 357899999877766665443 346789999999988765433 358999999999998864 33 5778889
Q ss_pred HHhcCceeeecchHHHHH
Q 014952 271 VQKYKVTVAPFVPPIVLA 288 (415)
Q Consensus 271 l~~~~~t~l~~~p~~l~~ 288 (415)
++..++..++........
T Consensus 124 l~~~~~~~ii~~~~~~~~ 141 (576)
T 3gqw_A 124 LASCQPAAIITGDEWLPL 141 (576)
T ss_dssp HHHHCCSEEEECGGGHHH
T ss_pred HHhcCCCEEEecHHHHHH
Confidence 999999999887654443
No 76
>4dg8_A PA1221; ANL superfamily, adenylation domain, peptidyl carrier protei ribosomal peptide synthetase, NRPS, valine adenylation, LIG; HET: AMP; 2.15A {Pseudomonas aeruginosa} PDB: 4dg9_A*
Probab=54.67 E-value=35 Score=33.20 Aligned_cols=92 Identities=14% Similarity=-0.013 Sum_probs=67.3
Q ss_pred CCCCCeEEEecCCCCCCCCceeeechHHHHHHHhhhhcCCCCCccCCCCcEEEEccchHHHHhhHHHHHHHHHcCcEEEE
Q 014952 179 INPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILI 258 (415)
Q Consensus 179 ~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~l~~l~~G~~~v~ 258 (415)
..|+.+|++.- .-.+|...+...+..+...+. ..+..+++++..+++-+..+- ..+++++..|+..+.
T Consensus 39 ~~Pd~~Av~~~---------~~~lTY~eL~~~a~~lA~~L~-~~Gv~~g~~V~i~~~~s~~~v--va~lailkaGa~~vp 106 (620)
T 4dg8_A 39 LHPHREAIRDR---------FGSVDYRQLLDSAEQLSDYLL-EHYPQPGVCLGVYGEYSRESI--TCLLAILLSGHHYLY 106 (620)
T ss_dssp HCTTSEEEEET---------TEEEEHHHHHHHHHHHHHHHH-HHCCSSCCEEEEESSSCHHHH--HHHHHHHHTTCEEEE
T ss_pred hCCCCeEEEcC---------CCcCcHHHHHHHHHHHHHHHH-HcCCCCCCEEEEEeCCCHHHH--HHHHHHHHhCCEEEe
Confidence 45677887642 235889988776666655432 346789999999888665433 358999999999999
Q ss_pred cCC-CCHHHHHHHHHhcCceeeecc
Q 014952 259 MQK-FDIVKLMELVQKYKVTVAPFV 282 (415)
Q Consensus 259 ~~~-~~~~~~~~~l~~~~~t~l~~~ 282 (415)
+++ ...+.+...++..++.++...
T Consensus 107 ld~~~p~~~l~~il~~~~~~~vl~~ 131 (620)
T 4dg8_A 107 IDLKQPAAWNAELCRQVDCRLILDC 131 (620)
T ss_dssp CCTTSCHHHHHHHHHHHTEEEEEEC
T ss_pred eCccChHHHHHHHHHhCCCcEEEec
Confidence 875 567788889999998888743
No 77
>4b2g_A GH3-1 auxin conjugating enzyme; signaling protein, ignaling protein, adenylate, amino acid conjugation, plant growth; HET: V1N; 2.40A {Vitis vinifera}
Probab=51.36 E-value=3.2 Score=40.30 Aligned_cols=31 Identities=23% Similarity=0.218 Sum_probs=26.1
Q ss_pred CCCCCeEEEecCCCCC-CCCceeeechHHHHH
Q 014952 179 INPDDVVALPYSSGTT-GLPKGVMLTHKGLVT 209 (415)
Q Consensus 179 ~~~~~~a~i~~TSGtT-G~pK~v~~t~~~l~~ 209 (415)
..++.+.++.-||||| |+||.|.+|...+..
T Consensus 96 l~~~~i~~f~~SSGTT~gk~K~IP~t~~~l~~ 127 (609)
T 4b2g_A 96 LSAHPISEFLTSSGTSAGERKLMPTIQEELDR 127 (609)
T ss_dssp SCSSCCCEEEEEEEEETTEEEEEEECTTHHHH
T ss_pred cCCCCCCeEEeCCCCCCCCceeeecCHHHHHH
Confidence 3567778889999999 889999999998754
No 78
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=50.54 E-value=66 Score=28.47 Aligned_cols=60 Identities=15% Similarity=0.099 Sum_probs=43.0
Q ss_pred HHHHcCCCCCCEEEEEcCCchhHHHHHHHHHHhCC-eEeecCCCCCHHHHHHHHHhcCceEEEEc
Q 014952 68 GLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGA-TSTTANPFYTPPEIAKQAIASKAKIIITQ 131 (415)
Q Consensus 68 ~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~-~~v~l~~~~~~~~~~~~l~~~~~~~vl~~ 131 (415)
.+...++++|++|+|...-.+-.+++++|- ..|+ .++.++. .++...++.+.+++.++..
T Consensus 158 al~~~~~~~g~~VlV~GaG~vG~~a~qla~-~~Ga~~Vi~~~~---~~~~~~~~~~lGa~~vi~~ 218 (352)
T 3fpc_A 158 GAELANIKLGDTVCVIGIGPVGLMSVAGAN-HLGAGRIFAVGS---RKHCCDIALEYGATDIINY 218 (352)
T ss_dssp HHHHTTCCTTCCEEEECCSHHHHHHHHHHH-TTTCSSEEEECC---CHHHHHHHHHHTCCEEECG
T ss_pred HHHhcCCCCCCEEEEECCCHHHHHHHHHHH-HcCCcEEEEECC---CHHHHHHHHHhCCceEEcC
Confidence 356678999999999987667777777765 5787 5666654 2344457777888877754
No 79
>4b2g_A GH3-1 auxin conjugating enzyme; signaling protein, ignaling protein, adenylate, amino acid conjugation, plant growth; HET: V1N; 2.40A {Vitis vinifera}
Probab=50.06 E-value=17 Score=35.26 Aligned_cols=85 Identities=14% Similarity=0.181 Sum_probs=46.8
Q ss_pred cccce---eeeecCCCCCHHHHHHHHhhCCCCccc-cccccccCCccccccccccCCccccCCCcccc-cccC-CeEEEE
Q 014952 300 MSSIR---TVMSGAAPMGKELEDAVRAKLPHAKLG-QGYGMTEAGPVLSMCLAFAKEPFEIKSGACGT-VVRN-AEMKIV 373 (415)
Q Consensus 300 l~~lr---~v~~gG~~l~~~~~~~~~~~~~~~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~G~-p~~~-~~v~i~ 373 (415)
+|++| .+..||. ..-.++++..+++.++. ..|++||.- +.+.. .+. ..++..+. .+|+ .-.+.+
T Consensus 301 WPnlk~l~~~~tG~~---~~Y~~~l~~~~g~~p~~~~~Y~ASEg~--~gi~~----~p~-~~p~~~~~~L~p~~~ffEFI 370 (609)
T 4b2g_A 301 WPNTKYLDVIVTGAM---AQYIPTLDYYSGGLPLACTMYASSECY--FGLNL----NPM-SKPSEVSYTIMPNMAYFEFL 370 (609)
T ss_dssp STTCCEEEEECSGGG---GGGHHHHHHHHTSCCEECCEEECSSCE--EEECS----CTT-SCGGGCCEEECTTSCEEEEE
T ss_pred CCCCcEEEEEccCCh---HHHHHHHHHHcCCCccccCccccccee--eeeec----CCC-CCcccCceeecCCcEEEEEE
Confidence 57744 5566663 34445565555677776 899999963 33321 111 11112232 2233 344555
Q ss_pred eCCC---------------CCCCCCCCceeEEEecC
Q 014952 374 DPDT---------------GISLPRNQAGEICIRGA 394 (415)
Q Consensus 374 d~~~---------------~~~~~~g~~Gel~v~~~ 394 (415)
+.++ ...|+.|+.+||+|...
T Consensus 371 P~~~~~~~~~~~~~~~~v~l~eVe~G~~YelViTt~ 406 (609)
T 4b2g_A 371 PHEHSSIPLSRDSPPRLVDLAHVEVGKEYELVITTY 406 (609)
T ss_dssp EGGGTTSCCCSSSCCCCEEGGGCCTTCEEEEEEECT
T ss_pred eccccccccccCCCCccccHhHcCCCCeEEEehhhh
Confidence 4332 13578999999999865
No 80
>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1
Probab=49.43 E-value=97 Score=27.48 Aligned_cols=64 Identities=14% Similarity=0.009 Sum_probs=45.3
Q ss_pred HHHHH--cCCCCCCEEEEEcCCchhHHHHHHHHHHhCCeEeecCCCCCHHHHHHHHHhcCceEEEEccc
Q 014952 67 AGLSK--LGVQKGDVIMLLLQNCPQFVFAFLGASYIGATSTTANPFYTPPEIAKQAIASKAKIIITQAV 133 (415)
Q Consensus 67 ~~L~~--~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~vl~~~~ 133 (415)
+.|.+ .++++|++|+|...-.+-.+++++|-...|+.++.++. +. +...++.+.+++.++...+
T Consensus 175 ~al~~~~~~~~~g~~VlV~GaG~vG~~avqlak~~~Ga~Vi~~~~--~~-~~~~~~~~lGa~~vi~~~~ 240 (359)
T 1h2b_A 175 RAVKKAARTLYPGAYVAIVGVGGLGHIAVQLLKVMTPATVIALDV--KE-EKLKLAERLGADHVVDARR 240 (359)
T ss_dssp HHHHHHHTTCCTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEES--SH-HHHHHHHHTTCSEEEETTS
T ss_pred HHHHhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeC--CH-HHHHHHHHhCCCEEEeccc
Confidence 34555 68999999999999778888888776543887666653 23 3345566788888776443
No 81
>4aec_A Cysteine synthase, mitochondrial; lyase, cysteine synthesis, assimilatory sulfate reduction, S plant inorganic sulfur uptake; HET: PLP; 2.40A {Arabidopsis thaliana}
Probab=48.64 E-value=82 Score=29.03 Aligned_cols=63 Identities=14% Similarity=0.036 Sum_probs=47.3
Q ss_pred HHcCC-CCCCEEEEEcCCchhHHHHHHHHHHhCCeEeecCCCCCHHHHHHHHHhcCceEEEEcc
Q 014952 70 SKLGV-QKGDVIMLLLQNCPQFVFAFLGASYIGATSTTANPFYTPPEIAKQAIASKAKIIITQA 132 (415)
Q Consensus 70 ~~~g~-~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~vl~~~ 132 (415)
.+.|. ++|....+....+-.-..+.+++.+.|..++.+-|...+......++..++++++++.
T Consensus 166 ~~~G~l~~g~~~VV~aSsGNhG~AlA~aAa~~Gl~~~IvmP~~~s~~k~~~~r~~GAeVv~v~~ 229 (430)
T 4aec_A 166 EQKGFISPGKSVLVEPTSGNTGIGLAFIAASRGYRLILTMPASMSMERRVLLKAFGAELVLTDP 229 (430)
T ss_dssp HHTTSCCTTTCEEEEECSSHHHHHHHHHHHHHTCEEEEEEETTSCHHHHHHHHHTTCEEEEECG
T ss_pred HHcCCCCCCCcEEEEECCCHHHHHHHHHHHHhCCEEEEEEcCCCCHHHHHHHHHCCCEEEEECC
Confidence 45564 6775444555556677777888999999888777776777778889999999999974
No 82
>4epl_A Jasmonic acid-amido synthetase JAR1; ANL adenylating enzyme, acyl acid-amido synthetase, adenylat ligase; HET: JAI; 2.01A {Arabidopsis thaliana}
Probab=47.96 E-value=30 Score=33.38 Aligned_cols=31 Identities=32% Similarity=0.403 Sum_probs=25.5
Q ss_pred CCCCCeEEEecCCCCC-CCCceeeechHHHHH
Q 014952 179 INPDDVVALPYSSGTT-GLPKGVMLTHKGLVT 209 (415)
Q Consensus 179 ~~~~~~a~i~~TSGtT-G~pK~v~~t~~~l~~ 209 (415)
..++.+.+..-||||| |++|.+.+|...+-.
T Consensus 95 L~~~pi~~f~~SSGTT~gk~K~IP~T~~~l~~ 126 (581)
T 4epl_A 95 LTGHPVPAISLSSGTSQGRPKFIPFTDELMEN 126 (581)
T ss_dssp SSSSCCSEEEEEEEEETTEEEEEEECHHHHHH
T ss_pred cCCCCcceEEecCCCCCCCccccccCHHHHHH
Confidence 3456677888999999 789999999997754
No 83
>2q3b_A Cysteine synthase A; pyridoxal-5'-phosphate, sulphur metabolism, cysteine biosynthesis, transferase; HET: LLP; 1.80A {Mycobacterium tuberculosis} PDB: 2q3c_A* 2q3d_A* 3rr2_A
Probab=46.43 E-value=1.1e+02 Score=26.60 Aligned_cols=90 Identities=11% Similarity=-0.045 Sum_probs=55.0
Q ss_pred CcEEEeCCCCCeeeHHHHHHHHHHHHHHHHHcCC-CCCCEEEEEcCCchhHHHHHHHHHHhCCeEeecCCCCCHHHHHHH
Q 014952 41 RPCIINGPTGDVYTYADVELTSRKVAAGLSKLGV-QKGDVIMLLLQNCPQFVFAFLGASYIGATSTTANPFYTPPEIAKQ 119 (415)
Q Consensus 41 ~~a~~~~~~~~~~Ty~el~~~~~~~a~~L~~~g~-~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~ 119 (415)
++.+-.++.+..-+|++--. ..+...+.+.|. ++|+.|.. ...+-.-..+.+++.+.|..++.+-|...+......
T Consensus 32 ~i~~K~E~~~ptgSfK~R~a--~~~l~~a~~~g~~~~g~~vv~-assGN~g~alA~~a~~~G~~~~iv~p~~~~~~k~~~ 108 (313)
T 2q3b_A 32 DIVAKLEFFNPANSVKDRIG--VAMLQAAEQAGLIKPDTIILE-PTSGNTGIALAMVCAARGYRCVLTMPETMSLERRML 108 (313)
T ss_dssp EEEEEEGGGSTTSBTHHHHH--HHHHHHHHHTTCCCTTCEEEE-ECSSHHHHHHHHHHHHHTCEEEEEEETTSCHHHHHH
T ss_pred EEEEEehhcCCCCcHHHHHH--HHHHHHHHHcCCCCCCCEEEE-eCCCHHHHHHHHHHHHcCCcEEEEECCCCCHHHHHH
Confidence 44443433334456665332 222233344454 66776655 444545555667778999888777666556666778
Q ss_pred HHhcCceEEEEccc
Q 014952 120 AIASKAKIIITQAV 133 (415)
Q Consensus 120 l~~~~~~~vl~~~~ 133 (415)
++..++++++++..
T Consensus 109 ~~~~Ga~v~~~~~~ 122 (313)
T 2q3b_A 109 LRAYGAELILTPGA 122 (313)
T ss_dssp HHHTTCEEEEECGG
T ss_pred HHHCCCEEEEeCCC
Confidence 88999999998863
No 84
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=45.50 E-value=1.1e+02 Score=26.86 Aligned_cols=78 Identities=8% Similarity=-0.046 Sum_probs=51.4
Q ss_pred eeHHHHHHHHHH---HHHHHHHc--CCCCCCEEEEEcCCchhHHHHHHHHHHhCCeEeecCCCCCHHHHHHHHHhcCceE
Q 014952 53 YTYADVELTSRK---VAAGLSKL--GVQKGDVIMLLLQNCPQFVFAFLGASYIGATSTTANPFYTPPEIAKQAIASKAKI 127 (415)
Q Consensus 53 ~Ty~el~~~~~~---~a~~L~~~--g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~ 127 (415)
+++.+....... .-+.|.+. ++++|++|+|...-.+-.+++++|-..-|+.++.++. + ++...++.+.+++.
T Consensus 143 ~~~~~aa~l~~~~~ta~~~l~~~~~~~~~g~~vlv~GaG~vG~~a~qla~~~g~~~Vi~~~~--~-~~~~~~~~~lGa~~ 219 (345)
T 3jv7_A 143 LDPVAAAPLTDAGLTPYHAISRVLPLLGPGSTAVVIGVGGLGHVGIQILRAVSAARVIAVDL--D-DDRLALAREVGADA 219 (345)
T ss_dssp CCHHHHGGGGTTTHHHHHHHHTTGGGCCTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEES--C-HHHHHHHHHTTCSE
T ss_pred CCHHHhhhhhhhHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcC--C-HHHHHHHHHcCCCE
Confidence 666665433322 22345553 7899999999998777888888877664666666653 2 34455677888888
Q ss_pred EEEccc
Q 014952 128 IITQAV 133 (415)
Q Consensus 128 vl~~~~ 133 (415)
++...+
T Consensus 220 ~i~~~~ 225 (345)
T 3jv7_A 220 AVKSGA 225 (345)
T ss_dssp EEECST
T ss_pred EEcCCC
Confidence 776543
No 85
>4epl_A Jasmonic acid-amido synthetase JAR1; ANL adenylating enzyme, acyl acid-amido synthetase, adenylat ligase; HET: JAI; 2.01A {Arabidopsis thaliana}
Probab=45.48 E-value=5.7 Score=38.30 Aligned_cols=86 Identities=13% Similarity=0.167 Sum_probs=46.7
Q ss_pred cccce---eeeecCCCCCHHHHHHHHhhCCCCccc-cccccccCCccccccccccCCccccCCCcccc-cccCC-eEEEE
Q 014952 300 MSSIR---TVMSGAAPMGKELEDAVRAKLPHAKLG-QGYGMTEAGPVLSMCLAFAKEPFEIKSGACGT-VVRNA-EMKIV 373 (415)
Q Consensus 300 l~~lr---~v~~gG~~l~~~~~~~~~~~~~~~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~G~-p~~~~-~v~i~ 373 (415)
+|++| .+..|+. ..-.+++++.+++.++. ..|++||+- +.+.. .....++..+. .+|+. -.+.+
T Consensus 301 WPnl~~i~~~~~G~~---~~Y~~~l~~~~g~~p~~~~~Y~ASEg~--~gi~~-----~p~~~~~~~~~~L~p~~~ffEFi 370 (581)
T 4epl_A 301 FPNAKYVYGIMTGSM---EPYVPKLRHYAGDLPLVSHDYGSSEGW--IAANV-----TPRLSPEEATFAVIPNLGYFEFL 370 (581)
T ss_dssp CTTCCCEEEECSGGG---GGGHHHHHHHHTTSCEEECCEEETTEE--EEECC-----CTTSCTTTCCEEECTTSCEEEEE
T ss_pred CCCCceEEEEeCCCh---HHHHHHHHHHcCCCccccCceecccee--eeeec-----CCCCCccccceeecCCcEEEEEE
Confidence 57786 3344432 34445666666677776 899999963 33321 11111222233 23333 33444
Q ss_pred eCCC----------CCCCCCCCceeEEEecCc
Q 014952 374 DPDT----------GISLPRNQAGEICIRGAQ 395 (415)
Q Consensus 374 d~~~----------~~~~~~g~~Gel~v~~~~ 395 (415)
+.++ ...|+.|+.+||++.+..
T Consensus 371 P~~~~~~~~~~~v~l~eve~G~~YelviTt~~ 402 (581)
T 4epl_A 371 PVSETGEGEEKPVGLTQVKIGEEYEVVITNYA 402 (581)
T ss_dssp EC-------CCCEEGGGCCTTCEEEEEEESTT
T ss_pred ecccccCCCCceeeHHHcCCCCeEEEEEeecc
Confidence 3221 135789999999999763
No 86
>2egu_A Cysteine synthase; O-acetylserine sulfhydrase, structural genomics, NPPSFA, NAT project on protein structural and functional analyses; 1.90A {Geobacillus kaustophilus}
Probab=44.99 E-value=1.2e+02 Score=26.30 Aligned_cols=91 Identities=14% Similarity=0.000 Sum_probs=55.4
Q ss_pred CCcEEEeCCCCCeeeHHHHHHHHHHHHHHHHHcCC-CCCCEEEEEcCCchhHHHHHHHHHHhCCeEeecCCCCCHHHHHH
Q 014952 40 DRPCIINGPTGDVYTYADVELTSRKVAAGLSKLGV-QKGDVIMLLLQNCPQFVFAFLGASYIGATSTTANPFYTPPEIAK 118 (415)
Q Consensus 40 ~~~a~~~~~~~~~~Ty~el~~~~~~~a~~L~~~g~-~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~ 118 (415)
.++.+-.++.+..-+|++.-.. ..+ ..+.+.|. ++|+.|.. ...+-.-..+.++|.+.|..++.+-|...+.....
T Consensus 29 ~~i~~K~E~~~ptgSfK~R~a~-~~l-~~a~~~g~~~~g~~vv~-assGN~g~a~A~~a~~~G~~~~iv~p~~~~~~k~~ 105 (308)
T 2egu_A 29 ADVYLKLEFMNPGSSVKDRIAL-AMI-EAAEKAGKLKPGDTIVE-PTSGNTGIGLAMVAAAKGYKAVLVMPDTMSLERRN 105 (308)
T ss_dssp CEEEEEEGGGSTTSBTHHHHHH-HHH-HHHHHTTCCCTTCEEEE-ECCHHHHHHHHHHHHHHTCEEEEEEESCSCHHHHH
T ss_pred CEEEEEecccCCCCChHHHHHH-HHH-HHHHHcCCCCCCCEEEE-eCCCHHHHHHHHHHHHcCCCEEEEECCCCCHHHHH
Confidence 3445534333444566544322 222 23334454 56666555 44555566667778889988777666655566677
Q ss_pred HHHhcCceEEEEccc
Q 014952 119 QAIASKAKIIITQAV 133 (415)
Q Consensus 119 ~l~~~~~~~vl~~~~ 133 (415)
.++..++++++++..
T Consensus 106 ~~~~~GA~v~~~~~~ 120 (308)
T 2egu_A 106 LLRAYGAELVLTPGA 120 (308)
T ss_dssp HHHHTTCEEEEECGG
T ss_pred HHHHcCCEEEEECCC
Confidence 888999999998764
No 87
>2jtq_A Phage shock protein E; solution structure rhodanese, stress response, transferase; NMR {Escherichia coli} PDB: 2jtr_A 2jts_A
Probab=44.14 E-value=49 Score=21.98 Aligned_cols=46 Identities=17% Similarity=-0.023 Sum_probs=31.8
Q ss_pred CeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHHhCCe
Q 014952 51 DVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGAT 103 (415)
Q Consensus 51 ~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~ 103 (415)
..+.+.++.+ .+.+++..+++.|.++|........+...+...|..
T Consensus 22 ~~ip~~~l~~-------~~~~l~~~~~~~ivv~C~~g~rs~~aa~~L~~~G~~ 67 (85)
T 2jtq_A 22 INIPLKEVKE-------RIATAVPDKNDTVKVYCNAGRQSGQAKEILSEMGYT 67 (85)
T ss_dssp EECCHHHHHH-------HHHHHCCCTTSEEEEEESSSHHHHHHHHHHHHTTCS
T ss_pred EEcCHHHHHH-------HHHHhCCCCCCcEEEEcCCCchHHHHHHHHHHcCCC
Confidence 3455665543 344456677888888888888777777777778864
No 88
>2pqm_A Cysteine synthase; OASS, PLP, lyase; HET: PLP; 1.86A {Entamoeba histolytica} PDB: 3bm5_A*
Probab=43.77 E-value=1.1e+02 Score=27.09 Aligned_cols=90 Identities=17% Similarity=-0.019 Sum_probs=55.1
Q ss_pred CcEEEeCCCCCeeeHHHHHHHHHHHHHHHHHcCC-CCCCEEEEEcCCchhHHHHHHHHHHhCCeEeecCCCCCHHHHHHH
Q 014952 41 RPCIINGPTGDVYTYADVELTSRKVAAGLSKLGV-QKGDVIMLLLQNCPQFVFAFLGASYIGATSTTANPFYTPPEIAKQ 119 (415)
Q Consensus 41 ~~a~~~~~~~~~~Ty~el~~~~~~~a~~L~~~g~-~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~ 119 (415)
++.+-.++.+.+-+|++.-.. ..+.. +.+.|. ++|+.|..... +-.-..+.+++.+.|..++.+-|...+......
T Consensus 43 ~v~~K~E~~~ptGSfKdR~a~-~~l~~-a~~~g~~~~g~~vv~aSs-GN~g~alA~aa~~~G~~~~iv~p~~~~~~k~~~ 119 (343)
T 2pqm_A 43 RILVKLEYFNPMSSVKDRVGF-NIVYQ-AIKDGRLKPGMEIIESTS-GNTGIALCQAGAVFGYRVNIAMPSTMSVERQMI 119 (343)
T ss_dssp EEEEEEGGGSTTSBTHHHHHH-HHHHH-HHHHTSSCTTCEEEEECS-SHHHHHHHHHHHHHTCCEEEEEETTSCHHHHHH
T ss_pred EEEEEeccCCCCCChHHHHHH-HHHHH-HHHcCCCCCCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHH
Confidence 444434433445566554222 22333 333454 67776666654 445555667777899877776666566667778
Q ss_pred HHhcCceEEEEccc
Q 014952 120 AIASKAKIIITQAV 133 (415)
Q Consensus 120 l~~~~~~~vl~~~~ 133 (415)
++..++.+++++..
T Consensus 120 ~~~~GA~V~~~~~~ 133 (343)
T 2pqm_A 120 MKAFGAELILTEGK 133 (343)
T ss_dssp HHHTTCEEEEECGG
T ss_pred HHHCCCEEEEECCC
Confidence 89999999998763
No 89
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=40.18 E-value=73 Score=28.00 Aligned_cols=77 Identities=10% Similarity=0.070 Sum_probs=50.4
Q ss_pred eeeHHHHHHHHHH---HHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHHhCCeEeecCCCCCHHHHHHHHHhcCceEE
Q 014952 52 VYTYADVELTSRK---VAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGATSTTANPFYTPPEIAKQAIASKAKII 128 (415)
Q Consensus 52 ~~Ty~el~~~~~~---~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~v 128 (415)
.+++.+....... .-+.|...++++|++|+|...-.+-.+++++|-. .|+.++.++. +.+ ...++.+.+++.+
T Consensus 139 ~~~~~~aa~l~~~~~ta~~~l~~~~~~~g~~VlV~GaG~vG~~a~qla~~-~Ga~Vi~~~~--~~~-~~~~~~~lGa~~~ 214 (340)
T 3s2e_A 139 KVGFVEIAPILCAGVTVYKGLKVTDTRPGQWVVISGIGGLGHVAVQYARA-MGLRVAAVDI--DDA-KLNLARRLGAEVA 214 (340)
T ss_dssp TSCHHHHGGGGTHHHHHHHHHHTTTCCTTSEEEEECCSTTHHHHHHHHHH-TTCEEEEEES--CHH-HHHHHHHTTCSEE
T ss_pred CCCHHHhhcccchhHHHHHHHHHcCCCCCCEEEEECCCHHHHHHHHHHHH-CCCeEEEEeC--CHH-HHHHHHHcCCCEE
Confidence 4666665432222 1234555689999999999877777777777764 6887776654 333 3446677888877
Q ss_pred EEcc
Q 014952 129 ITQA 132 (415)
Q Consensus 129 l~~~ 132 (415)
+...
T Consensus 215 i~~~ 218 (340)
T 3s2e_A 215 VNAR 218 (340)
T ss_dssp EETT
T ss_pred EeCC
Confidence 7543
No 90
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=40.10 E-value=1.3e+02 Score=27.16 Aligned_cols=55 Identities=18% Similarity=0.134 Sum_probs=37.8
Q ss_pred HHHcCCCCCCEEEEEcCCchhHHHHHHHHHHhCC-eEeecCCCCCHHHHHHHHHhcCceE
Q 014952 69 LSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGA-TSTTANPFYTPPEIAKQAIASKAKI 127 (415)
Q Consensus 69 L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~-~~v~l~~~~~~~~~~~~l~~~~~~~ 127 (415)
|...++++|++|+|...-.+-.+++++|-. .|+ .++.++. +. +...++.+.+++.
T Consensus 178 l~~~~~~~g~~VlV~GaG~vG~~aiqlAk~-~Ga~~Vi~~~~--~~-~~~~~a~~lGa~~ 233 (398)
T 1kol_A 178 AVTAGVGPGSTVYVAGAGPVGLAAAASARL-LGAAVVIVGDL--NP-ARLAHAKAQGFEI 233 (398)
T ss_dssp HHHTTCCTTCEEEEECCSHHHHHHHHHHHH-TTCSEEEEEES--CH-HHHHHHHHTTCEE
T ss_pred HHHcCCCCCCEEEEECCcHHHHHHHHHHHH-CCCCeEEEEcC--CH-HHHHHHHHcCCcE
Confidence 445689999999999876677777777664 687 4555543 23 3345567788874
No 91
>2vsq_A Surfactin synthetase subunit 3; ligase, peptidyl carrier protein, ligase phosphoprotein, TER module, phosphopantetheine; 2.60A {Bacillus subtilis}
Probab=40.02 E-value=68 Score=34.48 Aligned_cols=94 Identities=15% Similarity=0.041 Sum_probs=68.6
Q ss_pred CCCCCeEEEecCCCCCCCCceeeechHHHHHHHhhhhcCCCCCccCCCCcEEEEccchHHHHhhHHHHHHHHHcCcEEEE
Q 014952 179 INPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILI 258 (415)
Q Consensus 179 ~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~l~~l~~G~~~v~ 258 (415)
..|+.+|++.. ...+|.+.+...+..+...+. ..+.++++++..+++-+..+- ..+++.+..|+..+.
T Consensus 476 ~~p~~~Av~~~---------~~~lTY~eL~~~a~~lA~~L~-~~Gv~~g~~V~i~~~~s~~~v--v~~lailkaG~~~vp 543 (1304)
T 2vsq_A 476 ANPDAPALTYS---------GQTLSYRELDEEANRIARRLQ-KHGAGKGSVVALYTKRSLELV--IGILGVLKAGAAYLP 543 (1304)
T ss_dssp HCTTSEEEESS---------SCEEEHHHHHHHHHHHHHHHH-HTTCCTTCEEEECCCSSHHHH--HHHHHHHHTTCEEEE
T ss_pred hCCCCeEEEEC---------CeeEcHHHHHHHHHHHHHHHH-hcCcCCcCEEEEEeCCCHHHH--HHHHHHHHHCCEEEE
Confidence 35677776531 235788888776666555332 346789999999988665333 358999999999999
Q ss_pred cCC-CCHHHHHHHHHhcCceeeecchH
Q 014952 259 MQK-FDIVKLMELVQKYKVTVAPFVPP 284 (415)
Q Consensus 259 ~~~-~~~~~~~~~l~~~~~t~l~~~p~ 284 (415)
.++ ...+++...++..++.++.....
T Consensus 544 ldp~~p~~rl~~il~~~~~~~vl~~~~ 570 (1304)
T 2vsq_A 544 VDPKLPEDRISYMLADSAAACLLTHQE 570 (1304)
T ss_dssp CCTTSCHHHHHHHHHHHTCCEEEECST
T ss_pred ECCCCHHHHHHHHHHHcCCCEEEECcc
Confidence 875 67788888999999998887654
No 92
>2v03_A Cysteine synthase B; pyridoxal phosphate, cysteine biosynthesis, transferase, ENZ kinetics, enzymatic sythesis of novel compounds; HET: LLP CIT; 1.33A {Escherichia coli} PDB: 2bhs_A* 2bht_A* 2jc3_A*
Probab=39.91 E-value=1.6e+02 Score=25.34 Aligned_cols=89 Identities=15% Similarity=0.030 Sum_probs=55.1
Q ss_pred CcEEEeCCCCCeeeHHHHHHHHHHHHHHHHHcCC-CCCCEEEEEcCCchhHHHHHHHHHHhCCeEeecCCCCCHHHHHHH
Q 014952 41 RPCIINGPTGDVYTYADVELTSRKVAAGLSKLGV-QKGDVIMLLLQNCPQFVFAFLGASYIGATSTTANPFYTPPEIAKQ 119 (415)
Q Consensus 41 ~~a~~~~~~~~~~Ty~el~~~~~~~a~~L~~~g~-~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~ 119 (415)
++.+-.++.+.+-+|++.-. ...+. .+.+.|. ++|+.|..... +-.-..+.+++.+.|..++.+-|...+......
T Consensus 26 ~v~~K~E~~~ptGSfK~R~a-~~~i~-~a~~~g~~~~g~~vv~~ss-GN~g~a~A~~a~~~G~~~~iv~p~~~~~~k~~~ 102 (303)
T 2v03_A 26 EVWLKLEGNNPAGSVKDRAA-LSMIV-EAEKRGEIKPGDVLIEATS-GNTGIALAMIAALKGYRMKLLMPDNMSQERRAA 102 (303)
T ss_dssp EEEEEEGGGSTTSBTHHHHH-HHHHH-HHHHTTCCCTTCEEEEECS-SHHHHHHHHHHHHHTCEEEEEEETTSCHHHHHH
T ss_pred EEEEEeccCCCCCCcHHHHH-HHHHH-HHHHcCCCCCCCEEEEECC-cHHHHHHHHHHHHcCCcEEEEECCCCCHHHHHH
Confidence 44444443334445555322 22222 3334454 66776666654 445556667777999988777766666667788
Q ss_pred HHhcCceEEEEcc
Q 014952 120 AIASKAKIIITQA 132 (415)
Q Consensus 120 l~~~~~~~vl~~~ 132 (415)
++..++++++++.
T Consensus 103 ~~~~Ga~v~~~~~ 115 (303)
T 2v03_A 103 MRAYGAELILVTK 115 (303)
T ss_dssp HHHTTCEEEEECT
T ss_pred HHHcCCEEEEECC
Confidence 8999999999985
No 93
>3dzz_A Putative pyridoxal 5'-phosphate-dependent C-S LYA; putative PLP-dependent aminotransferase; HET: MSE LLP PG4; 1.61A {Lactobacillus delbrueckii subsp} SCOP: c.67.1.0
Probab=38.48 E-value=2.1e+02 Score=25.21 Aligned_cols=54 Identities=7% Similarity=0.108 Sum_probs=31.2
Q ss_pred CCCCCEEEEEcCCchhHHHHHHHHHHhCCeEeecCCC-------CCHHHHHHHHHhcCceEEEE
Q 014952 74 VQKGDVIMLLLQNCPQFVFAFLGASYIGATSTTANPF-------YTPPEIAKQAIASKAKIIIT 130 (415)
Q Consensus 74 ~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~-------~~~~~~~~~l~~~~~~~vl~ 130 (415)
+++||.|.+..+.-.. ...++...|+.++.++.+ .+.+.+...+.+.++++|+.
T Consensus 106 ~~~gd~vl~~~~~~~~---~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~v~i 166 (391)
T 3dzz_A 106 TSPGDQILVQEPVYNM---FYSVIEGNGRRVISSDLIYENSKYSVNWADLEEKLATPSVRMMVF 166 (391)
T ss_dssp SCTTCEEEECSSCCHH---HHHHHHHTTCEEEECCCEEETTEEECCHHHHHHHHTSTTEEEEEE
T ss_pred CCCCCeEEECCCCcHH---HHHHHHHcCCEEEEeeeeecCCceeecHHHHHHHHhccCceEEEE
Confidence 4567776655544333 233455667776666542 45677777776556666554
No 94
>3gi1_A LBP, laminin-binding protein of group A streptococci; zinc-binding receptor, metal-binding, helical backbone, alpha/beta domains; 2.45A {Streptococcus pyogenes} PDB: 3hjt_A
Probab=37.82 E-value=86 Score=26.96 Aligned_cols=93 Identities=15% Similarity=0.253 Sum_probs=53.8
Q ss_pred HHHHHHHHHHHHHHHc--CCCCCCEEEEEcCCchhHHHHHHHHHHhCCeEeecCCC--CCHH---HHHHHHHhcCceEEE
Q 014952 57 DVELTSRKVAAGLSKL--GVQKGDVIMLLLQNCPQFVFAFLGASYIGATSTTANPF--YTPP---EIAKQAIASKAKIII 129 (415)
Q Consensus 57 el~~~~~~~a~~L~~~--g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~--~~~~---~~~~~l~~~~~~~vl 129 (415)
++.++.+.+-..+++. .+ ++ +..+...+...++.-.+++-..|.. -+++. -++. ++...+++.++++||
T Consensus 158 ~~~~~L~~Ld~~~~~~l~~~-~~-~~~v~~H~af~Yf~~~yGl~~~~~~--~~~~~~eps~~~l~~l~~~ik~~~v~~if 233 (286)
T 3gi1_A 158 AFKKEAEQLTEEYTQKFKKV-RS-KTFVTQHTAFSYLAKRFGLKQLGIS--GISPEQEPSPRQLKEIQDFVKEYNVKTIF 233 (286)
T ss_dssp HHHHHHHHHHHHHHHHHTTC-SC-CEEEEEESCCHHHHHHTTCEEEEEE--CSCC---CCHHHHHHHHHHHHHTTCCEEE
T ss_pred HHHHHHHHHHHHHHHHHhcC-CC-CEEEEECCchHHHHHHCCCeEeecc--ccCCCCCCCHHHHHHHHHHHHHcCCCEEE
Confidence 3333444444444432 23 34 4556677888888877777665422 23332 2333 555666778999999
Q ss_pred EcccchHH-HHhhhhhcCceEEEeC
Q 014952 130 TQAVYNDK-VRDLSEHHGARIVTID 153 (415)
Q Consensus 130 ~~~~~~~~-~~~~~~~~~~~~i~~~ 153 (415)
+++....+ ...+.+..+.+++.++
T Consensus 234 ~e~~~~~~~~~~la~~~g~~v~~l~ 258 (286)
T 3gi1_A 234 AEDNVNPKIAHAIAKSTGAKVKTLS 258 (286)
T ss_dssp ECTTSCTHHHHHHHHTTTCEEEECC
T ss_pred EeCCCChHHHHHHHHHhCCeEEEec
Confidence 98765544 3444555667776665
No 95
>1z7w_A Cysteine synthase; transferase; HET: PLP; 2.20A {Arabidopsis thaliana} SCOP: c.79.1.1 PDB: 1z7y_A* 2isq_A*
Probab=37.64 E-value=1.6e+02 Score=25.56 Aligned_cols=92 Identities=13% Similarity=0.033 Sum_probs=55.5
Q ss_pred CCcEEEeCCCCCeeeHHHHHHHHHHHHHHHHHcCC-CCCCEEEEEcCCchhHHHHHHHHHHhCCeEeecCCCCCHHHHHH
Q 014952 40 DRPCIINGPTGDVYTYADVELTSRKVAAGLSKLGV-QKGDVIMLLLQNCPQFVFAFLGASYIGATSTTANPFYTPPEIAK 118 (415)
Q Consensus 40 ~~~a~~~~~~~~~~Ty~el~~~~~~~a~~L~~~g~-~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~ 118 (415)
.++.+-.++.+.+-+|++--.. ..+.. +.+.|. ++|+...+....+-.-..+.+++.+.|..++.+-|...+.....
T Consensus 30 ~~v~~K~E~~~ptGSfK~R~a~-~~l~~-a~~~G~~~~~~~~vv~assGN~g~alA~aa~~~G~~~~iv~p~~~~~~k~~ 107 (322)
T 1z7w_A 30 GRVAAKLEMMEPCSSVKDRIGF-SMISD-AEKKGLIKPGESVLIEPTSGNTGVGLAFTAAAKGYKLIITMPASMSTERRI 107 (322)
T ss_dssp SEEEEEEGGGSTTSBTHHHHHH-HHHHH-HHHTTSCCTTTCEEEEECSSHHHHHHHHHHHHHTCEEEEEEETTSCHHHHH
T ss_pred ceEEEEecccCCCCchHHHHHH-HHHHH-HHHcCCCCCCCCEEEEeCCCHHHHHHHHHHHHcCCCEEEEeCCCCCHHHHH
Confidence 3455534433334455543221 22222 344553 56643333445555666677778899988877766656667778
Q ss_pred HHHhcCceEEEEccc
Q 014952 119 QAIASKAKIIITQAV 133 (415)
Q Consensus 119 ~l~~~~~~~vl~~~~ 133 (415)
.++..++++++++.+
T Consensus 108 ~~~~~GA~V~~~~~~ 122 (322)
T 1z7w_A 108 ILLAFGVELVLTDPA 122 (322)
T ss_dssp HHHHTTCEEEEECGG
T ss_pred HHHHcCCEEEEeCCC
Confidence 889999999998753
No 96
>3ijw_A Aminoglycoside N3-acetyltransferase; anthrax, COA, acyltransferase, structural genom center for structural genomics of infectious diseases; HET: MSE ACO; 1.90A {Bacillus anthracis} SCOP: c.140.1.0 PDB: 3slf_A* 3n0s_A* 3slb_A* 3n0m_A* 3kzl_A* 3e4f_A*
Probab=37.04 E-value=25 Score=30.06 Aligned_cols=25 Identities=24% Similarity=0.464 Sum_probs=21.0
Q ss_pred HHHHHHHHHcCCCCCCEEEEEcCCc
Q 014952 63 RKVAAGLSKLGVQKGDVIMLLLQNC 87 (415)
Q Consensus 63 ~~~a~~L~~~g~~~g~~V~i~~~~~ 87 (415)
..+.+.|+++|+++||.|.+...=+
T Consensus 18 ~~l~~~L~~LGi~~Gd~llVHsSl~ 42 (268)
T 3ijw_A 18 KTITNDLRKLGLKKGMTVIVHSSLS 42 (268)
T ss_dssp HHHHHHHHHHTCCTTCEEEEEECTG
T ss_pred HHHHHHHHHcCCCCCCEEEEEechH
Confidence 4567889999999999999998743
No 97
>3l6b_A Serine racemase; pyridoxal phosphate, PLP, isomerase; HET: PLP; 1.50A {Homo sapiens} SCOP: c.79.1.0 PDB: 3l6r_A* 3hmk_A* 3l6c_A*
Probab=37.01 E-value=79 Score=28.07 Aligned_cols=59 Identities=14% Similarity=-0.008 Sum_probs=42.0
Q ss_pred CCCEEEEEcCCchhHHHHHHHHHHhCCeEeecCCCCCHHHHHHHHHhcCceEEEEcccch
Q 014952 76 KGDVIMLLLQNCPQFVFAFLGASYIGATSTTANPFYTPPEIAKQAIASKAKIIITQAVYN 135 (415)
Q Consensus 76 ~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~vl~~~~~~ 135 (415)
+.+.|.-.. .+-.-..+.++|.+.|..++.+-|...+......++..++++++++....
T Consensus 75 ~~~~vv~~S-sGNhg~a~A~aa~~~G~~~~iv~p~~~~~~k~~~~~~~GA~V~~v~~~~~ 133 (346)
T 3l6b_A 75 KPKAVVTHS-SGNHGQALTYAAKLEGIPAYIVVPQTAPDCKKLAIQAYGASIVYCEPSDE 133 (346)
T ss_dssp CCSCEEEEC-SSHHHHHHHHHHHHTTCCEEEEEETTSCHHHHHHHHHTTCEEEEECSSHH
T ss_pred CCCEEEEeC-CCHHHHHHHHHHHHhCCCEEEEECCCCCHHHHHHHHHCCCEEEEECCCHH
Confidence 334444443 45555666778889998877776766667778888999999999986543
No 98
>3dwg_A Cysteine synthase B; sulfur carrier protein complex, beta-grAsp fold, amino-acid biosynthesis; HET: PLP; 1.53A {Mycobacterium tuberculosis} SCOP: c.79.1.0 PDB: 3fgp_A* 3dki_A* 3dwi_A*
Probab=36.78 E-value=1.6e+02 Score=25.78 Aligned_cols=90 Identities=17% Similarity=0.037 Sum_probs=55.7
Q ss_pred CcEEEeCCCCCeeeHHHHHHHHHHHHHHHHHcC-CCCCCEEEEEcCCchhHHHHHHHHHHhCCeEeecCCCCCHHHHHHH
Q 014952 41 RPCIINGPTGDVYTYADVELTSRKVAAGLSKLG-VQKGDVIMLLLQNCPQFVFAFLGASYIGATSTTANPFYTPPEIAKQ 119 (415)
Q Consensus 41 ~~a~~~~~~~~~~Ty~el~~~~~~~a~~L~~~g-~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~ 119 (415)
++.+-.++.+..=+++.-- ....+. ...+.| +++++.|..... +-.-..+.+++.+.|..++.+-|...+......
T Consensus 38 ~v~~K~E~~~ptGSfK~R~-a~~~l~-~a~~~g~l~~~~~vv~aSs-GN~g~alA~aa~~~G~~~~iv~p~~~~~~k~~~ 114 (325)
T 3dwg_A 38 RLWAKLEDRNPTGSIKDRP-AVRMIE-QAEADGLLRPGATILEPTS-GNTGISLAMAARLKGYRLICVMPENTSVERRQL 114 (325)
T ss_dssp EEEEEETTSSTTSBTTHHH-HHHHHH-HHHHTTCCCTTCEEEEECS-SHHHHHHHHHHHHHTCEEEEEEESSSCHHHHHH
T ss_pred EEEEEECCCCCCCChHHHH-HHHHHH-HHHHcCCCCCCCEEEEeCC-cHHHHHHHHHHHHcCCcEEEEECCCCCHHHHHH
Confidence 3444444333344554421 112222 233445 467777666544 555667777778889888777676666677788
Q ss_pred HHhcCceEEEEccc
Q 014952 120 AIASKAKIIITQAV 133 (415)
Q Consensus 120 l~~~~~~~vl~~~~ 133 (415)
++..++++++++..
T Consensus 115 ~~~~GA~V~~~~~~ 128 (325)
T 3dwg_A 115 LELYGAQIIFSAAE 128 (325)
T ss_dssp HHHHTCEEEEECST
T ss_pred HHHCCCEEEEECCC
Confidence 89999999999753
No 99
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=36.26 E-value=1.6e+02 Score=25.92 Aligned_cols=76 Identities=13% Similarity=0.173 Sum_probs=47.8
Q ss_pred eeeHHHHHHHHHHHH---HHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHHhCC-eEeecCCCCCHHHHHHHHHhcCceE
Q 014952 52 VYTYADVELTSRKVA---AGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGA-TSTTANPFYTPPEIAKQAIASKAKI 127 (415)
Q Consensus 52 ~~Ty~el~~~~~~~a---~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~-~~v~l~~~~~~~~~~~~l~~~~~~~ 127 (415)
.+++.+... ..-++ +.|...++++|++|+|...-.+-..++.+|-. .|+ .++.++. + ++...++.+.+++.
T Consensus 145 ~l~~~~aa~-~~~~~ta~~al~~~~~~~g~~VlV~GaG~vG~~aiqlak~-~Ga~~Vi~~~~--~-~~~~~~a~~lGa~~ 219 (356)
T 1pl8_A 145 NVTFEEGAL-IEPLSVGIHACRRGGVTLGHKVLVCGAGPIGMVTLLVAKA-MGAAQVVVTDL--S-ATRLSKAKEIGADL 219 (356)
T ss_dssp TSCHHHHHH-HHHHHHHHHHHHHHTCCTTCEEEEECCSHHHHHHHHHHHH-TTCSEEEEEES--C-HHHHHHHHHTTCSE
T ss_pred CCCHHHHHh-hchHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHH-cCCCEEEEECC--C-HHHHHHHHHhCCCE
Confidence 356665432 22222 23445689999999999976677777777764 687 5555543 2 33345566778877
Q ss_pred EEEcc
Q 014952 128 IITQA 132 (415)
Q Consensus 128 vl~~~ 132 (415)
++...
T Consensus 220 vi~~~ 224 (356)
T 1pl8_A 220 VLQIS 224 (356)
T ss_dssp EEECS
T ss_pred EEcCc
Confidence 66543
No 100
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=35.32 E-value=1.1e+02 Score=26.43 Aligned_cols=75 Identities=16% Similarity=0.137 Sum_probs=48.6
Q ss_pred eeeHHHHHHHHHH---HHHHHHHcCCCCCCEEEEEc-CCchhHHHHHHHHHHhCCeEeecCCCCCHHHHHHHHHhcCceE
Q 014952 52 VYTYADVELTSRK---VAAGLSKLGVQKGDVIMLLL-QNCPQFVFAFLGASYIGATSTTANPFYTPPEIAKQAIASKAKI 127 (415)
Q Consensus 52 ~~Ty~el~~~~~~---~a~~L~~~g~~~g~~V~i~~-~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~ 127 (415)
.+++.+....... .-+.|...++++|++|+|.. .-.+-.+++++|- ..|+.++.+. +.+. ..++.+.+++.
T Consensus 125 ~~~~~~aa~l~~~~~ta~~al~~~~~~~g~~vlV~Ga~G~vG~~a~q~a~-~~Ga~vi~~~---~~~~-~~~~~~lGa~~ 199 (321)
T 3tqh_A 125 KLSFLQAASLPTAGLTALQALNQAEVKQGDVVLIHAGAGGVGHLAIQLAK-QKGTTVITTA---SKRN-HAFLKALGAEQ 199 (321)
T ss_dssp TSCHHHHHHSHHHHHHHHHHHHHTTCCTTCEEEESSTTSHHHHHHHHHHH-HTTCEEEEEE---CHHH-HHHHHHHTCSE
T ss_pred CCCHHHHhhhhhHHHHHHHHHHhcCCCCCCEEEEEcCCcHHHHHHHHHHH-HcCCEEEEEe---ccch-HHHHHHcCCCE
Confidence 3566665543322 12345557899999999997 6667777777765 5688766553 3344 55667778777
Q ss_pred EEEc
Q 014952 128 IITQ 131 (415)
Q Consensus 128 vl~~ 131 (415)
++..
T Consensus 200 ~i~~ 203 (321)
T 3tqh_A 200 CINY 203 (321)
T ss_dssp EEET
T ss_pred EEeC
Confidence 6653
No 101
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=34.79 E-value=73 Score=28.12 Aligned_cols=74 Identities=12% Similarity=-0.053 Sum_probs=47.7
Q ss_pred eeeHHHHHHHHHH---HHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHHhCCeEeecCCCCCHHHHHHHHHhcCceEE
Q 014952 52 VYTYADVELTSRK---VAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGATSTTANPFYTPPEIAKQAIASKAKII 128 (415)
Q Consensus 52 ~~Ty~el~~~~~~---~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~v 128 (415)
.+++.+....... .-+.|.+.++++|++|+|...-.+-.+++++|- ..|+.++.+..+. +. ..++.+.+++.+
T Consensus 149 ~~~~~~aa~l~~~~~ta~~~l~~~~~~~g~~VlV~GaG~vG~~a~qla~-~~Ga~Vi~~~~~~--~~-~~~~~~lGa~~v 224 (348)
T 3two_A 149 NAPLEKVAPLLCAGITTYSPLKFSKVTKGTKVGVAGFGGLGSMAVKYAV-AMGAEVSVFARNE--HK-KQDALSMGVKHF 224 (348)
T ss_dssp TSCHHHHGGGGTHHHHHHHHHHHTTCCTTCEEEEESCSHHHHHHHHHHH-HTTCEEEEECSSS--TT-HHHHHHTTCSEE
T ss_pred CCCHHHhhhhhhhHHHHHHHHHhcCCCCCCEEEEECCcHHHHHHHHHHH-HCCCeEEEEeCCH--HH-HHHHHhcCCCee
Confidence 3566665422221 123466678999999999988667777777775 4688777666432 22 335566788777
Q ss_pred E
Q 014952 129 I 129 (415)
Q Consensus 129 l 129 (415)
+
T Consensus 225 ~ 225 (348)
T 3two_A 225 Y 225 (348)
T ss_dssp E
T ss_pred c
Confidence 7
No 102
>2nyg_A YOKD protein; PFAM02522, NYSGXRC, aminoglycoside 3-N- acetyltransferase, PSI-2, structural genomics, protein structure initiative; HET: COA; 2.60A {Bacillus subtilis} SCOP: c.140.1.2
Probab=34.75 E-value=28 Score=29.85 Aligned_cols=24 Identities=21% Similarity=0.408 Sum_probs=20.1
Q ss_pred HHHHHHHHcCCCCCCEEEEEcCCc
Q 014952 64 KVAAGLSKLGVQKGDVIMLLLQNC 87 (415)
Q Consensus 64 ~~a~~L~~~g~~~g~~V~i~~~~~ 87 (415)
.+.+.|+++|+++||.|.+...=+
T Consensus 17 ~L~~~L~~LGI~~Gd~llVHsSl~ 40 (273)
T 2nyg_A 17 SITEDLKALGLKKGMTVLVHSSLS 40 (273)
T ss_dssp HHHHHHHHHTCCTTCEEEEEECSG
T ss_pred HHHHHHHHcCCCCCCEEEEEechH
Confidence 356789999999999999998743
No 103
>3sma_A FRBF; N-acetyl transferase, acetyl COA binding, transferase; HET: ACO; 2.00A {Streptomyces rubellomurinus}
Probab=34.65 E-value=28 Score=29.96 Aligned_cols=30 Identities=27% Similarity=0.435 Sum_probs=24.4
Q ss_pred CCeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCC
Q 014952 50 GDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQN 86 (415)
Q Consensus 50 ~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~ 86 (415)
+..+|-.+| .+.|+++|+++||.|.+...=
T Consensus 19 ~~~~T~~~L-------~~~L~~LGI~~Gd~llVHsSL 48 (286)
T 3sma_A 19 RELVTRDRL-------ASDLAALGVRPGGVLLVHASL 48 (286)
T ss_dssp CCEECHHHH-------HHHHHHHTCCTTCEEEEEECS
T ss_pred CCCcCHHHH-------HHHHHHcCCCCCCEEEEEech
Confidence 566777665 578999999999999998873
No 104
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=34.36 E-value=1.5e+02 Score=26.51 Aligned_cols=61 Identities=13% Similarity=0.129 Sum_probs=41.3
Q ss_pred HHHHcC-CCCCCEEEEEcCCchhHHHHHHHHHHhCC-eEeecCCCCCHHHHHHHHHhcCceEEEEcc
Q 014952 68 GLSKLG-VQKGDVIMLLLQNCPQFVFAFLGASYIGA-TSTTANPFYTPPEIAKQAIASKAKIIITQA 132 (415)
Q Consensus 68 ~L~~~g-~~~g~~V~i~~~~~~~~~~~~lA~~~~G~-~~v~l~~~~~~~~~~~~l~~~~~~~vl~~~ 132 (415)
.|.+.+ +++|++|+|...-.+-..++.+|-. .|+ .++.+.. +.+ ...++.+.+++.++...
T Consensus 186 al~~~~~~~~g~~VlV~GaG~vG~~aiqlak~-~Ga~~Vi~~~~--~~~-~~~~~~~lGa~~vi~~~ 248 (380)
T 1vj0_A 186 AFDEYPESFAGKTVVIQGAGPLGLFGVVIARS-LGAENVIVIAG--SPN-RLKLAEEIGADLTLNRR 248 (380)
T ss_dssp HHHTCSSCCBTCEEEEECCSHHHHHHHHHHHH-TTBSEEEEEES--CHH-HHHHHHHTTCSEEEETT
T ss_pred HHHhcCCCCCCCEEEEECcCHHHHHHHHHHHH-cCCceEEEEcC--CHH-HHHHHHHcCCcEEEecc
Confidence 344568 8999999999966677777777654 684 6555553 233 34456678888777543
No 105
>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A
Probab=34.36 E-value=1.3e+02 Score=26.51 Aligned_cols=79 Identities=13% Similarity=0.065 Sum_probs=50.4
Q ss_pred eeeHHHHHHHH--HHHH-HHHHH-cCCCCCCEEEEEcC-CchhHHHHHHHHHHhCCeE-eecCCCCCHHHHHHHHHhcCc
Q 014952 52 VYTYADVELTS--RKVA-AGLSK-LGVQKGDVIMLLLQ-NCPQFVFAFLGASYIGATS-TTANPFYTPPEIAKQAIASKA 125 (415)
Q Consensus 52 ~~Ty~el~~~~--~~~a-~~L~~-~g~~~g~~V~i~~~-~~~~~~~~~lA~~~~G~~~-v~l~~~~~~~~~~~~l~~~~~ 125 (415)
.+++.+..... --.| +.|.+ .++++|++|+|... -.+-.+++++|-. .|+.. +..+.....++....+.+.++
T Consensus 139 ~l~~~~Aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga~G~vG~~aiqlak~-~Ga~vi~~~~~~~~~~~~~~~~~~lGa 217 (357)
T 1zsy_A 139 DIPLQSAATLGVNPCTAYRMLMDFEQLQPGDSVIQNASNSGVGQAVIQIAAA-LGLRTINVVRDRPDIQKLSDRLKSLGA 217 (357)
T ss_dssp SSCHHHHHHTTSHHHHHHHHHHHSSCCCTTCEEEESSTTSHHHHHHHHHHHH-HTCEEEEEECCCSCHHHHHHHHHHTTC
T ss_pred CCCHHHHhhhcccHHHHHHHHHHHhccCCCCEEEEeCCcCHHHHHHHHHHHH-cCCEEEEEecCccchHHHHHHHHhcCC
Confidence 35666654321 1122 23444 48999999999997 6777777777764 68754 444444344555667778888
Q ss_pred eEEEEc
Q 014952 126 KIIITQ 131 (415)
Q Consensus 126 ~~vl~~ 131 (415)
+.++..
T Consensus 218 ~~vi~~ 223 (357)
T 1zsy_A 218 EHVITE 223 (357)
T ss_dssp SEEEEH
T ss_pred cEEEec
Confidence 887754
No 106
>3ju7_A Putative PLP-dependent aminotransferase; NP_978343.1, struct genomics, joint center for structural genomics, JCSG; HET: LLP PGE; 2.19A {Bacillus cereus atcc 10987}
Probab=34.26 E-value=1.2e+02 Score=27.17 Aligned_cols=59 Identities=14% Similarity=0.099 Sum_probs=36.9
Q ss_pred HHHcCCCCCCEEEEEcCCchhHHHHHHHHHHhCCeEeecCCC-----CCHHHHHHHHHhcC--ceEEEE
Q 014952 69 LSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGATSTTANPF-----YTPPEIAKQAIASK--AKIIIT 130 (415)
Q Consensus 69 L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~-----~~~~~~~~~l~~~~--~~~vl~ 130 (415)
|...++++||.|.+-.+..... .-++...|+.++.++.+ .+.+.+...+..-+ .++|+.
T Consensus 70 l~~l~~~~Gd~Vi~~~~~~~~~---~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~tk~v~~ 135 (377)
T 3ju7_A 70 IQLKKRKKGKYALMPSFTFPAT---PLAAIWCGLEPYFIDISIDDWYMDKTVLWDKIEELKEEVAIVVP 135 (377)
T ss_dssp HHHHSCTTCCEEEEESSSCTHH---HHHHHHTTCEEEEECBCTTTCSBCHHHHHHHHHHHGGGEEEECC
T ss_pred HHHcCCCCcCEEEECCCCcHHH---HHHHHHcCCEEEEEecCCccCCcCHHHHHHHHhcCCCCceEEEE
Confidence 4445678999888776654433 34566788887766532 35677777664334 566654
No 107
>1pq4_A Periplasmic binding protein component of AN ABC T uptake transporter; ZNUA, loop, metal-binding, metal binding protein; 1.90A {Synechocystis SP} SCOP: c.92.2.2 PDB: 2ov3_A 2ov1_A
Probab=34.06 E-value=67 Score=27.75 Aligned_cols=76 Identities=11% Similarity=0.152 Sum_probs=48.7
Q ss_pred CEEEEEcCCchhHHHHHHHHHHhCCeEeecCCCCCHHH---HHHHHHhcCceEEEEcccchHH-HHhhhhhcCceEEEeC
Q 014952 78 DVIMLLLQNCPQFVFAFLGASYIGATSTTANPFYTPPE---IAKQAIASKAKIIITQAVYNDK-VRDLSEHHGARIVTID 153 (415)
Q Consensus 78 ~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~---~~~~l~~~~~~~vl~~~~~~~~-~~~~~~~~~~~~i~~~ 153 (415)
.+..+...+...++.-.+++-..|..- ....-++.+ +...+++.++++||++.....+ ...+.+..+.+++.++
T Consensus 190 ~~~~v~~H~af~Yf~~~yGl~~~~~~~--~~~eps~~~l~~l~~~ik~~~v~~If~e~~~~~~~~~~ia~~~g~~v~~ld 267 (291)
T 1pq4_A 190 QRKFIVFHPSWAYFARDYNLVQIPIEV--EGQEPSAQELKQLIDTAKENNLTMVFGETQFSTKSSEAIAAEIGAGVELLD 267 (291)
T ss_dssp CCEEEESSCCCHHHHHHTTCEEEESCB--TTBCCCHHHHHHHHHHHHTTTCCEEEEETTSCCHHHHHHHHHHTCEEEEEC
T ss_pred CCEEEEECCchHHHHHHCCCEEeeccc--CCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCChHHHHHHHHHcCCeEEEEc
Confidence 345677888899988888877665432 222334554 4455666789999998765443 3444456677777776
Q ss_pred CC
Q 014952 154 PP 155 (415)
Q Consensus 154 ~~ 155 (415)
..
T Consensus 268 ~l 269 (291)
T 1pq4_A 268 PL 269 (291)
T ss_dssp TT
T ss_pred Cc
Confidence 43
No 108
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=33.96 E-value=1.1e+02 Score=27.35 Aligned_cols=59 Identities=17% Similarity=0.200 Sum_probs=41.2
Q ss_pred HHHHcCCCCCCEEEEEcCCchhHHHHHHHHHHhCC-eEeecCCCCCHHHHHHHHHhcCceEEEE
Q 014952 68 GLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGA-TSTTANPFYTPPEIAKQAIASKAKIIIT 130 (415)
Q Consensus 68 ~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~-~~v~l~~~~~~~~~~~~l~~~~~~~vl~ 130 (415)
.|...++++|++|+|...-.+-.+++.+|- ..|+ .++.++. + ++...++++.+++.++.
T Consensus 174 ~l~~~~~~~g~~VlV~GaG~vG~~aiqlak-~~Ga~~Vi~~~~--~-~~~~~~a~~lGa~~vi~ 233 (370)
T 4ej6_A 174 GVDLSGIKAGSTVAILGGGVIGLLTVQLAR-LAGATTVILSTR--Q-ATKRRLAEEVGATATVD 233 (370)
T ss_dssp HHHHHTCCTTCEEEEECCSHHHHHHHHHHH-HTTCSEEEEECS--C-HHHHHHHHHHTCSEEEC
T ss_pred HHHhcCCCCCCEEEEECCCHHHHHHHHHHH-HcCCCEEEEECC--C-HHHHHHHHHcCCCEEEC
Confidence 355568999999999988667777777766 5788 6666654 2 33345666777776664
No 109
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=33.49 E-value=1.9e+02 Score=25.98 Aligned_cols=55 Identities=16% Similarity=0.109 Sum_probs=38.1
Q ss_pred HHHHcCCCCCCEEEEEcCCchhHHHHHHHHHHhCC-eEeecCCCCCHHHHHHHHHhcCce
Q 014952 68 GLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGA-TSTTANPFYTPPEIAKQAIASKAK 126 (415)
Q Consensus 68 ~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~-~~v~l~~~~~~~~~~~~l~~~~~~ 126 (415)
.|...++++|++|+|...-.+-.+++++|-. .|+ .++.++. +.+. ..++.+.++.
T Consensus 177 al~~~~~~~g~~VlV~GaG~vG~~aiqlak~-~Ga~~Vi~~~~--~~~~-~~~a~~lGa~ 232 (398)
T 2dph_A 177 GCVSAGVKPGSHVYIAGAGPVGRCAAAGARL-LGAACVIVGDQ--NPER-LKLLSDAGFE 232 (398)
T ss_dssp HHHHTTCCTTCEEEEECCSHHHHHHHHHHHH-HTCSEEEEEES--CHHH-HHHHHTTTCE
T ss_pred HHHHcCCCCCCEEEEECCCHHHHHHHHHHHH-cCCCEEEEEcC--CHHH-HHHHHHcCCc
Confidence 3555689999999999976677777777764 687 5555543 2333 3456677876
No 110
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=33.49 E-value=1.6e+02 Score=26.56 Aligned_cols=55 Identities=18% Similarity=0.171 Sum_probs=40.0
Q ss_pred CCCCCCEEEEEcCCchhHHHHHHHHHHhCC-eEeecCCCCCHHHHHHHHHhcCceEEEEc
Q 014952 73 GVQKGDVIMLLLQNCPQFVFAFLGASYIGA-TSTTANPFYTPPEIAKQAIASKAKIIITQ 131 (415)
Q Consensus 73 g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~-~~v~l~~~~~~~~~~~~l~~~~~~~vl~~ 131 (415)
++++|++|+|...-.+-.+++++|- ..|+ .++.++. + ++...++.+.+++.++..
T Consensus 210 ~~~~g~~VlV~GaG~vG~~aiqlak-~~Ga~~Vi~~~~--~-~~~~~~~~~lGa~~vi~~ 265 (404)
T 3ip1_A 210 GIRPGDNVVILGGGPIGLAAVAILK-HAGASKVILSEP--S-EVRRNLAKELGADHVIDP 265 (404)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHH-HTTCSEEEEECS--C-HHHHHHHHHHTCSEEECT
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHH-HcCCCEEEEECC--C-HHHHHHHHHcCCCEEEcC
Confidence 7899999999998777777777776 4788 6666653 2 344456677888877754
No 111
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=32.95 E-value=95 Score=27.51 Aligned_cols=63 Identities=13% Similarity=0.022 Sum_probs=42.4
Q ss_pred HHHHHcCCC-CCCEEEEEcCCchhHHHHHHHHHHhCCeEeecCCCCCHHHHHHHHHhcCceEEEEcc
Q 014952 67 AGLSKLGVQ-KGDVIMLLLQNCPQFVFAFLGASYIGATSTTANPFYTPPEIAKQAIASKAKIIITQA 132 (415)
Q Consensus 67 ~~L~~~g~~-~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~vl~~~ 132 (415)
+.|.+.+++ +|++|+|...-.+-..++.+|-. .|+.++.+..+ .+.+....++.+++.++...
T Consensus 170 ~~l~~~~~~~~g~~VlV~GaG~vG~~a~qlak~-~Ga~Vi~~~~~--~~~~~~~~~~lGa~~vi~~~ 233 (357)
T 2cf5_A 170 SPLSHFGLKQPGLRGGILGLGGVGHMGVKIAKA-MGHHVTVISSS--NKKREEALQDLGADDYVIGS 233 (357)
T ss_dssp HHHHHTSTTSTTCEEEEECCSHHHHHHHHHHHH-HTCEEEEEESS--TTHHHHHHTTSCCSCEEETT
T ss_pred HHHHhcCCCCCCCEEEEECCCHHHHHHHHHHHH-CCCeEEEEeCC--hHHHHHHHHHcCCceeeccc
Confidence 345567888 99999999987777878777765 68876655542 33433334467777666544
No 112
>1y7l_A O-acetylserine sulfhydrylase, O-acetylserine (thiol)-lyase; X-RAY crystallography, sulfhydrylase; HET: LLP; 1.55A {Haemophilus influenzae} SCOP: c.79.1.1 PDB: 3iqg_X* 3iqh_X* 3iqi_X* 1fcj_A* 1oas_A* 1d6s_A*
Probab=32.30 E-value=2.5e+02 Score=24.28 Aligned_cols=91 Identities=14% Similarity=-0.006 Sum_probs=57.4
Q ss_pred CCcEEEeCCCCCeeeHHHHHHHHHHHHHHHHHcCC-CCCCEEEEEcCCchhHHHHHHHHHHhCCeEeecCCCCCHHHHHH
Q 014952 40 DRPCIINGPTGDVYTYADVELTSRKVAAGLSKLGV-QKGDVIMLLLQNCPQFVFAFLGASYIGATSTTANPFYTPPEIAK 118 (415)
Q Consensus 40 ~~~a~~~~~~~~~~Ty~el~~~~~~~a~~L~~~g~-~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~ 118 (415)
.++.+-.++.+.+-||++.-.. ..+. .+.+.|. ++|+.|.... .+-.-..+.+++.+.|..++.+-|...+.....
T Consensus 26 ~~i~~K~E~~~ptGSfK~R~a~-~~i~-~a~~~g~~~~~~~vv~~s-sGN~g~a~A~~a~~~G~~~~iv~p~~~~~~k~~ 102 (316)
T 1y7l_A 26 GNVVVKIEGRNPSYSVKCRIGA-NMVW-QAEKDGTLTKGKEIVDAT-SGNTGIALAYVAAARGYKITLTMPETMSLERKR 102 (316)
T ss_dssp TCEEEEETTSSGGGBTHHHHHH-HHHH-HHHHTTSSCTTCEEEESC-CSHHHHHHHHHHHHHTCCEEEEEETTSCHHHHH
T ss_pred CEEEEEeccCCCCCChHHHHHH-HHHH-HHHHcCCCCCCCEEEEeC-CcHHHHHHHHHHHHcCCcEEEEECCCCCHHHHH
Confidence 4555645544445566554332 2222 3344454 6666555554 455556666777899988777666656667777
Q ss_pred HHHhcCceEEEEccc
Q 014952 119 QAIASKAKIIITQAV 133 (415)
Q Consensus 119 ~l~~~~~~~vl~~~~ 133 (415)
.++..++++++++..
T Consensus 103 ~~~~~GA~v~~~~~~ 117 (316)
T 1y7l_A 103 LLCGLGVNLVLTEGA 117 (316)
T ss_dssp HHHHTTCEEEEECGG
T ss_pred HHHHcCCEEEEeCCC
Confidence 889999999998764
No 113
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=32.25 E-value=2.2e+02 Score=25.17 Aligned_cols=75 Identities=16% Similarity=0.061 Sum_probs=48.1
Q ss_pred eeeHHHHHHHHHHH--H-HHH-HHcCCCCCCEEEEEcCCchhHHHHHHHHHHhCCeEeecCCCCCHHHHHHHHHhcCceE
Q 014952 52 VYTYADVELTSRKV--A-AGL-SKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGATSTTANPFYTPPEIAKQAIASKAKI 127 (415)
Q Consensus 52 ~~Ty~el~~~~~~~--a-~~L-~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~ 127 (415)
.+++.+........ | +.| ...++++|++|+|...-.+-..++.+|- ..|+.++.+.. +.+. ...+.+.+++.
T Consensus 161 ~~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlV~G~G~vG~~a~qla~-~~Ga~Vi~~~~--~~~~-~~~~~~lGa~~ 236 (363)
T 3uog_A 161 SLDAAEASTLPCAGLTAWFALVEKGHLRAGDRVVVQGTGGVALFGLQIAK-ATGAEVIVTSS--SREK-LDRAFALGADH 236 (363)
T ss_dssp TSCHHHHHTTTTHHHHHHHHHTTTTCCCTTCEEEEESSBHHHHHHHHHHH-HTTCEEEEEES--CHHH-HHHHHHHTCSE
T ss_pred CCCHHHHhhcccHHHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHH-HcCCEEEEEec--Cchh-HHHHHHcCCCE
Confidence 46777665332222 2 334 3458999999999996666666666665 57887776653 3333 44567788887
Q ss_pred EEE
Q 014952 128 IIT 130 (415)
Q Consensus 128 vl~ 130 (415)
++.
T Consensus 237 vi~ 239 (363)
T 3uog_A 237 GIN 239 (363)
T ss_dssp EEE
T ss_pred EEc
Confidence 776
No 114
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=31.86 E-value=93 Score=27.80 Aligned_cols=61 Identities=13% Similarity=0.044 Sum_probs=40.7
Q ss_pred HHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHHhCCeEeecCCCCCHHHHHHHHHhcCceEEEEc
Q 014952 67 AGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGATSTTANPFYTPPEIAKQAIASKAKIIITQ 131 (415)
Q Consensus 67 ~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~vl~~ 131 (415)
+.|.+.++++|++|+|...-.+-..++.+|-. .|+.++.+..+ .+.+ ..+.+.+++.++..
T Consensus 185 ~al~~~~~~~g~~VlV~GaG~vG~~aiqlak~-~Ga~Vi~~~~~--~~~~-~~a~~lGa~~vi~~ 245 (369)
T 1uuf_A 185 SPLRHWQAGPGKKVGVVGIGGLGHMGIKLAHA-MGAHVVAFTTS--EAKR-EAAKALGADEVVNS 245 (369)
T ss_dssp HHHHHTTCCTTCEEEEECCSHHHHHHHHHHHH-TTCEEEEEESS--GGGH-HHHHHHTCSEEEET
T ss_pred HHHHhcCCCCCCEEEEECCCHHHHHHHHHHHH-CCCEEEEEeCC--HHHH-HHHHHcCCcEEecc
Confidence 44556689999999999887777777777754 68875555532 2332 34455677766643
No 115
>1y80_A Predicted cobalamin binding protein; corrinoid, factor IIIM, methyl transferase, structural genomics, PSI, protein structure initiative; HET: B1M; 1.70A {Moorella thermoacetica}
Probab=31.73 E-value=1.9e+02 Score=23.18 Aligned_cols=83 Identities=12% Similarity=0.033 Sum_probs=44.7
Q ss_pred CeeeHHHHHHHHHHHHHHHHHc-------CCCCCCEEEEEcCC----chhHHHHHHHHHHhCCeEeecCCCCCHHHHHHH
Q 014952 51 DVYTYADVELTSRKVAAGLSKL-------GVQKGDVIMLLLQN----CPQFVFAFLGASYIGATSTTANPFYTPPEIAKQ 119 (415)
Q Consensus 51 ~~~Ty~el~~~~~~~a~~L~~~-------g~~~g~~V~i~~~~----~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~ 119 (415)
..++-.|++..++.+-..+..+ .-..+.+|.+.+.. .+...+....+...|.-++.+..+.+.+++...
T Consensus 55 g~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~vll~~~~gd~H~iG~~~va~~l~~~G~~v~~LG~~vp~~~l~~~ 134 (210)
T 1y80_A 55 NEMFVPEVLMSANAMNAGVEVVKQSQQAFDMPSVGKIVLGTVKGDLHDIGKNLVAMMLESGGFTVYNLGVDIEPGKFVEA 134 (210)
T ss_dssp ------------------------------CCCCCEEEEEEBTTCCCCHHHHHHHHHHHHTTCEEEECCSSBCHHHHHHH
T ss_pred CceeHHHHHHHHHHHHHHHHHHHHHhccccCCCCCEEEEEeCCCcccHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHH
Confidence 3455555555444444333321 11223356666543 355556666667889999999999999999999
Q ss_pred HHhcCceEEEEccc
Q 014952 120 AIASKAKIIITQAV 133 (415)
Q Consensus 120 l~~~~~~~vl~~~~ 133 (415)
+.+.++++|..+..
T Consensus 135 ~~~~~~d~v~lS~~ 148 (210)
T 1y80_A 135 VKKYQPDIVGMSAL 148 (210)
T ss_dssp HHHHCCSEEEEECC
T ss_pred HHHcCCCEEEEecc
Confidence 99999999987653
No 116
>2o1e_A YCDH; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.60A {Bacillus subtilis}
Probab=30.65 E-value=98 Score=27.01 Aligned_cols=75 Identities=13% Similarity=0.170 Sum_probs=44.9
Q ss_pred EEEEEcCCchhHHHHHHHHHHhCCeEeecCCCCCHHHHHH---HHHhcCceEEEEcccchHH-HHhhhhhcCceEEEeC
Q 014952 79 VIMLLLQNCPQFVFAFLGASYIGATSTTANPFYTPPEIAK---QAIASKAKIIITQAVYNDK-VRDLSEHHGARIVTID 153 (415)
Q Consensus 79 ~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~---~l~~~~~~~vl~~~~~~~~-~~~~~~~~~~~~i~~~ 153 (415)
+..+...+...++.-.+++-..|..-+.-...-++.++.. .+++.++++||++.....+ ...+.+..+.+++.++
T Consensus 191 ~~~v~~H~af~Yfa~~yGl~~~~~~~~~~~~eps~~~l~~l~~~ik~~~v~~If~e~~~~~~~~~~ia~e~g~~v~~l~ 269 (312)
T 2o1e_A 191 KEFITQHTAFGYLAKEYGLKQVPIAGLSPDQEPSAASLAKLKTYAKEHNVKVIYFEEIASSKVADTLASEIGAKTEVLN 269 (312)
T ss_dssp CEEEESSCTTHHHHHHTTCEEEECSSCCSSSCCCHHHHHHHHHHTTSSCCCEEECSSCCCHHHHHHHHHHTCCEEECCC
T ss_pred CEEEEECCchHHHHHHCCCeEEEeeccCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCChHHHHHHHHHhCCcEEEec
Confidence 4567778888888877776655432111112234455444 4556788999998766544 4444555667766554
No 117
>4h27_A L-serine dehydratase/L-threonine deaminase; PLP dependent typeii, PLP binding, liver, lyase; HET: LLP; 1.30A {Homo sapiens} PDB: 1p5j_A* 1pwh_A* 1pwe_A*
Probab=29.42 E-value=1.1e+02 Score=27.28 Aligned_cols=58 Identities=14% Similarity=0.103 Sum_probs=42.0
Q ss_pred CEEEEEcCCchhHHHHHHHHHHhCCeEeecCCCCCHHHHHHHHHhcCceEEEEcccchH
Q 014952 78 DVIMLLLQNCPQFVFAFLGASYIGATSTTANPFYTPPEIAKQAIASKAKIIITQAVYND 136 (415)
Q Consensus 78 ~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~vl~~~~~~~ 136 (415)
+.|... ..+-.-..+.+++.+.|..++.+-|...+......++..++++++++....+
T Consensus 94 ~~vv~a-SsGN~g~alA~aa~~~G~~~~iv~p~~~~~~k~~~~~~~GA~Vv~v~~~~~~ 151 (364)
T 4h27_A 94 AHFVCS-SSGNAGMAAAYAARQLGVPATIVVPGTTPALTIERLKNEGATVKVVGELLDE 151 (364)
T ss_dssp CEEEEC-CSSHHHHHHHHHHHHHTCCEEEEEETTSCHHHHHHHHTTTCEEEEECSSTTH
T ss_pred CEEEEe-CCChHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHcCCEEEEECCCHHH
Confidence 344443 3355556677778899988877777767777788889999999999865443
No 118
>2prs_A High-affinity zinc uptake system protein ZNUA; protein consists of two (beta/ALFA)4 domains, metal transport; 1.70A {Escherichia coli} PDB: 2osv_A 2ps0_A 2ps3_A 2ps9_A 2ogw_A 2xy4_A* 2xqv_A* 2xh8_A
Probab=29.15 E-value=1.2e+02 Score=25.93 Aligned_cols=73 Identities=19% Similarity=0.279 Sum_probs=46.6
Q ss_pred EEEEEcCCchhHHHHHHHHHHhCCeEeecCCC--CCHH---HHHHHHHhcCceEEEEcccchH-HHHhhhhhcCceEEEe
Q 014952 79 VIMLLLQNCPQFVFAFLGASYIGATSTTANPF--YTPP---EIAKQAIASKAKIIITQAVYND-KVRDLSEHHGARIVTI 152 (415)
Q Consensus 79 ~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~--~~~~---~~~~~l~~~~~~~vl~~~~~~~-~~~~~~~~~~~~~i~~ 152 (415)
+..+...+...++.-.+++-..|.. -+.+. -++. ++...+++.++++||++..... ....+.+..+.+++.+
T Consensus 175 ~~~v~~H~af~Yf~~~yGl~~~~~~--~~~~~~eps~~~l~~l~~~ik~~~v~~if~e~~~~~~~~~~ia~~~g~~v~~l 252 (284)
T 2prs_A 175 KGYFVFHDAYGYFEKQFGLTPLGHF--TVNPEIQPGAQRLHEIRTQLVEQKATCVFAEPQFRPAVVESVARGTSVRMGTL 252 (284)
T ss_dssp CCEEEEESCCHHHHHHHTCCCCEEE--ESSTTSCCCHHHHHHHHHHHHHTTCCEEEECTTSCSHHHHHHTTTSCCEEEEC
T ss_pred CeEEEECccHHHHHHHCCCeEeEee--ccCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCChHHHHHHHHHcCCeEEEe
Confidence 3456677789999988888766543 33332 3344 4555666789999999876543 3444445556666555
Q ss_pred C
Q 014952 153 D 153 (415)
Q Consensus 153 ~ 153 (415)
+
T Consensus 253 d 253 (284)
T 2prs_A 253 D 253 (284)
T ss_dssp C
T ss_pred c
Confidence 4
No 119
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=29.13 E-value=1.8e+02 Score=25.35 Aligned_cols=63 Identities=10% Similarity=0.010 Sum_probs=42.5
Q ss_pred HHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHHhCCe-EeecCCCCCHHHHHHHHHhcCceEEEEccc
Q 014952 67 AGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGAT-STTANPFYTPPEIAKQAIASKAKIIITQAV 133 (415)
Q Consensus 67 ~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~-~v~l~~~~~~~~~~~~l~~~~~~~vl~~~~ 133 (415)
..+...++++|++|+|..--+.-.+++++|-. .|+. ++.++. .++...++++.+++.++...+
T Consensus 151 ~~~~~~~~~~g~~VlV~GaG~vG~~aiq~ak~-~G~~~vi~~~~---~~~k~~~a~~lGa~~~i~~~~ 214 (346)
T 4a2c_A 151 HAFHLAQGCENKNVIIIGAGTIGLLAIQCAVA-LGAKSVTAIDI---SSEKLALAKSFGAMQTFNSSE 214 (346)
T ss_dssp HHHHHTTCCTTSEEEEECCSHHHHHHHHHHHH-TTCSEEEEEES---CHHHHHHHHHTTCSEEEETTT
T ss_pred HHHHHhccCCCCEEEEECCCCcchHHHHHHHH-cCCcEEEEEec---hHHHHHHHHHcCCeEEEeCCC
Confidence 33455688999999999887777777666655 5654 344443 234456777888888876543
No 120
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=29.12 E-value=2.5e+02 Score=24.83 Aligned_cols=58 Identities=14% Similarity=0.029 Sum_probs=39.9
Q ss_pred HcCCCCCCEEEEEcCCchhHHHHHHHHHHhCC-eEeecCCCCCHHHHHHHHHhcCceEEEEcc
Q 014952 71 KLGVQKGDVIMLLLQNCPQFVFAFLGASYIGA-TSTTANPFYTPPEIAKQAIASKAKIIITQA 132 (415)
Q Consensus 71 ~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~-~~v~l~~~~~~~~~~~~l~~~~~~~vl~~~ 132 (415)
..++++|++|+|...-.+-.+++++|-. .|+ .++.++.+ .+. ..++.+.+++.++...
T Consensus 186 ~~~~~~g~~VlV~GaG~vG~~aiqlak~-~Ga~~Vi~~~~~--~~~-~~~a~~lGa~~vi~~~ 244 (373)
T 1p0f_A 186 TAKVTPGSTCAVFGLGGVGFSAIVGCKA-AGASRIIGVGTH--KDK-FPKAIELGATECLNPK 244 (373)
T ss_dssp TTCCCTTCEEEEECCSHHHHHHHHHHHH-HTCSEEEEECSC--GGG-HHHHHHTTCSEEECGG
T ss_pred ccCCCCCCEEEEECCCHHHHHHHHHHHH-cCCCeEEEECCC--HHH-HHHHHHcCCcEEEecc
Confidence 4589999999999976777777777764 687 55555542 232 3455677888777543
No 121
>3hh8_A Metal ABC transporter substrate-binding lipoprote; lipoprotein, metal binding, cell membrane, copper transport, iron; 1.87A {Streptococcus pyogenes serotype M1} SCOP: c.92.2.2 PDB: 1psz_A 3ztt_A
Probab=28.87 E-value=93 Score=26.87 Aligned_cols=93 Identities=11% Similarity=0.145 Sum_probs=54.5
Q ss_pred HHHHHHHHHHHHHHHHc--CCCCCCEEEEEcCCchhHHHHHHHHHHhCCeEeecCCC--CCHH---HHHHHHHhcCceEE
Q 014952 56 ADVELTSRKVAAGLSKL--GVQKGDVIMLLLQNCPQFVFAFLGASYIGATSTTANPF--YTPP---EIAKQAIASKAKII 128 (415)
Q Consensus 56 ~el~~~~~~~a~~L~~~--g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~--~~~~---~~~~~l~~~~~~~v 128 (415)
.++.++.+.+-..+++. .++.+.+..+..++...++.-.+++-..+. .-+.+. -++. ++...+++.++++|
T Consensus 159 ~~~~~~L~~Ld~~~~~~l~~~~~~~~~~v~~H~af~Yf~~~yGl~~~~~--~~~~~~~eps~~~l~~l~~~ik~~~v~~i 236 (294)
T 3hh8_A 159 KAYVAKLEKLDKEAKSKFDAIAENKKLIVTSEGCFKYFSKAYGVPSAYI--WEINTEEEGTPDQISSLIEKLKVIKPSAL 236 (294)
T ss_dssp HHHHHHHHHHHHHHHHTTTTSCGGGCCEEEEESCCHHHHHHHTCCEEEE--ESSCCSCCCCHHHHHHHHHHHHHSCCSCE
T ss_pred HHHHHHHHHHHHHHHHHHhhCCccCcEEEEECChHHHHHHHcCCceeec--cccCCCCCCCHHHHHHHHHHHHHcCCCEE
Confidence 33444444444445442 333333666777889999998888875542 223332 2333 45566667899999
Q ss_pred EEcccchHH-HHhhhhhcCceEE
Q 014952 129 ITQAVYNDK-VRDLSEHHGARIV 150 (415)
Q Consensus 129 l~~~~~~~~-~~~~~~~~~~~~i 150 (415)
|++.....+ ...+.+..+.+++
T Consensus 237 f~e~~~~~~~~~~ia~~~g~~v~ 259 (294)
T 3hh8_A 237 FVESSVDRRPMETVSKDSGIPIY 259 (294)
T ss_dssp EEETTSCSHHHHHHHHHHCCCEE
T ss_pred EEeCCCCcHHHHHHHHHhCCcEE
Confidence 998765433 4455555666665
No 122
>1ofu_X SULA, hypothetical protein PA3008; bacterial cell division inhibitor, SULA protein; HET: GDP; 2.1A {Pseudomonas aeruginosa} SCOP: c.37.1.22
Probab=28.61 E-value=1.7e+02 Score=21.25 Aligned_cols=53 Identities=11% Similarity=0.112 Sum_probs=38.5
Q ss_pred HHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHHhCCeEeec--CCCCCHHHHHH
Q 014952 66 AAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGATSTTA--NPFYTPPEIAK 118 (415)
Q Consensus 66 a~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l--~~~~~~~~~~~ 118 (415)
+.+|.+.|+.+...+.+...+..+.+-+.-=+++.|...+.+ .+..+..+.++
T Consensus 47 ~~~L~~~Gl~~~rll~v~~~~~~d~lwa~EqaLrsg~~~aVl~wl~~l~~~~~RR 101 (119)
T 1ofu_X 47 HEWLRRAGLNRERILLLQAKDNAAALALSCEALRLGRSHTVVSWLEPLSRAARKQ 101 (119)
T ss_dssp HHHHHHTTCCTTSEEEECCSSHHHHHHHHHHHHHHTCEEEEEECCSSCCHHHHHH
T ss_pred HHHHHHcCCChHHEEEEECCCcHHHHHHHHHHHhcCCccEEEECCCcCChHHHHH
Confidence 567888899988888888888888888888888888754433 34555554443
No 123
>1o58_A O-acetylserine sulfhydrylase; TM0665, structural genomics, J protein structure initiative, joint center for structural G transferase; 1.80A {Thermotoga maritima} SCOP: c.79.1.1 PDB: 3fca_A*
Probab=28.21 E-value=2.8e+02 Score=23.72 Aligned_cols=88 Identities=13% Similarity=-0.001 Sum_probs=50.4
Q ss_pred CcEEEeCCCCCeeeHHHHHHHHHHHHHHHHHcCC-CCCCEEEEEcCCchhHHHHHHHHHHhCCeEeecCCCCCHHHHHHH
Q 014952 41 RPCIINGPTGDVYTYADVELTSRKVAAGLSKLGV-QKGDVIMLLLQNCPQFVFAFLGASYIGATSTTANPFYTPPEIAKQ 119 (415)
Q Consensus 41 ~~a~~~~~~~~~~Ty~el~~~~~~~a~~L~~~g~-~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~ 119 (415)
++.+-.++.+..-+|++.-.. .+...+.+.|. +++ .| ....+-.-..+.+++.+.|..++.+-|...+......
T Consensus 32 ~v~~K~E~~~ptGSfK~R~a~--~~l~~a~~~g~~~~~-vv--~aSsGN~g~a~A~aa~~~G~~~~iv~p~~~~~~k~~~ 106 (303)
T 1o58_A 32 RIFLKLEKNNPGGSVKDRPAL--FMILDAEKRGLLKNG-IV--EPTSGNMGIAIAMIGAKRGHRVILTMPETMSVERRKV 106 (303)
T ss_dssp TEEEEEGGGSTTSBTTHHHHH--HHHHHHHHTTCCTTC-EE--EECSSHHHHHHHHHHHHHTCCEEEEEETTSCHHHHHH
T ss_pred eEEEEecCCCCCCChHHHHHH--HHHHHHHHcCCCCCC-EE--EECchHHHHHHHHHHHHcCCcEEEEECCCCCHHHHHH
Confidence 445534333334455543222 22223334454 344 33 3333444555666777899877766665556667778
Q ss_pred HHhcCceEEEEccc
Q 014952 120 AIASKAKIIITQAV 133 (415)
Q Consensus 120 l~~~~~~~vl~~~~ 133 (415)
++..++++++++..
T Consensus 107 ~~~~GA~V~~~~~~ 120 (303)
T 1o58_A 107 LKMLGAELVLTPGE 120 (303)
T ss_dssp HHHTTCEEEEECGG
T ss_pred HHHcCCEEEEECCC
Confidence 88999999998764
No 124
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=28.14 E-value=3e+02 Score=24.02 Aligned_cols=60 Identities=17% Similarity=0.182 Sum_probs=40.5
Q ss_pred HHHHcCCCCCCEEEEEcCCchhHHHHHHHHHHhCCeEeecCCCCCHHHHHHHHHhcCceEEEEc
Q 014952 68 GLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGATSTTANPFYTPPEIAKQAIASKAKIIITQ 131 (415)
Q Consensus 68 ~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~vl~~ 131 (415)
.|...++++|++|+|...-.+-..++.+|- ..|+.++.++. +.+ ...++.+.+++.++..
T Consensus 160 al~~~~~~~g~~VlV~GaG~vG~~a~qla~-~~Ga~Vi~~~~--~~~-~~~~~~~lGa~~~~~~ 219 (352)
T 1e3j_A 160 ACRRAGVQLGTTVLVIGAGPIGLVSVLAAK-AYGAFVVCTAR--SPR-RLEVAKNCGADVTLVV 219 (352)
T ss_dssp HHHHHTCCTTCEEEEECCSHHHHHHHHHHH-HTTCEEEEEES--CHH-HHHHHHHTTCSEEEEC
T ss_pred HHHhcCCCCCCEEEEECCCHHHHHHHHHHH-HcCCEEEEEcC--CHH-HHHHHHHhCCCEEEcC
Confidence 344568999999999998667777777766 46887554443 233 3445567787766643
No 125
>3sr3_A Microcin immunity protein MCCF; csgid, structural genomics, MCCF protein, center for structu genomics of infectious diseases, immune system; 1.50A {Bacillus anthracis} PDB: 3gjz_A 3t5m_A* 3u1b_A* 3tyx_A*
Probab=28.03 E-value=2e+02 Score=25.39 Aligned_cols=61 Identities=11% Similarity=0.014 Sum_probs=35.7
Q ss_pred CCCCCCEEEEEcCCch------hHHHHHHH-HHHhCCeEeecCCC--------CCH----HHHHHHHHhcCceEEEEccc
Q 014952 73 GVQKGDVIMLLLQNCP------QFVFAFLG-ASYIGATSTTANPF--------YTP----PEIAKQAIASKAKIIITQAV 133 (415)
Q Consensus 73 g~~~g~~V~i~~~~~~------~~~~~~lA-~~~~G~~~v~l~~~--------~~~----~~~~~~l~~~~~~~vl~~~~ 133 (415)
-+++||+|+|+.|.+. +.+-.... +-..|..++.-... -+. +++...+.+-+++.|++...
T Consensus 9 ~L~~GD~I~ivaPSs~~~~~~~~~~~~~~~~L~~~G~~v~~~~~~~~~~~~~ag~d~~Ra~dL~~a~~Dp~i~aI~~~rG 88 (336)
T 3sr3_A 9 SLKYGDTIGIYSPSSPVTYTSPKRFERAKSYLLQKGFHILEGSLTGRYDYYRSGSIQERAKELNALIRNPNVSCIMSTIG 88 (336)
T ss_dssp CCCTTCEEEEECSSSCHHHHCHHHHHHHHHHHHHTTCEEEECTTTTCCBTTBSSCHHHHHHHHHHHHHCTTEEEEEESCC
T ss_pred CCCCCCEEEEEeCCCCccccCHHHHHHHHHHHHhCCCEEEEcccccccccccCCCHHHHHHHHHHHhhCCCCCEEEEccc
Confidence 4788999999998773 12222222 22357776642211 111 45666666778889998653
No 126
>3r7f_A Aspartate carbamoyltransferase; aspartate transcarbamoylase, carbamoyl phosphate, transferas catalytic cycle; 2.10A {Bacillus subtilis} PDB: 3r7d_A 3r7l_A* 2at2_A
Probab=27.89 E-value=3e+02 Score=23.86 Aligned_cols=100 Identities=8% Similarity=0.028 Sum_probs=57.7
Q ss_pred eeeHHHHHHHHHHHHHHHHHc---CCCCCCEEEEE-cCCc-hhHHHHHHHHHHhCCeEeecCCCCCH-------HHHHHH
Q 014952 52 VYTYADVELTSRKVAAGLSKL---GVQKGDVIMLL-LQNC-PQFVFAFLGASYIGATSTTANPFYTP-------PEIAKQ 119 (415)
Q Consensus 52 ~~Ty~el~~~~~~~a~~L~~~---g~~~g~~V~i~-~~~~-~~~~~~~lA~~~~G~~~v~l~~~~~~-------~~~~~~ 119 (415)
.+|-.|+.. .-.+|..|++. ..-+|..|+.+ ..+| .--+....|+.++|+-++.+++..+. .+-.+.
T Consensus 9 dls~~ei~~-ll~~A~~lk~~~~~~~L~gk~la~lF~e~STRTR~SFE~A~~~LGg~~i~l~~~~ss~~kgEsl~DTarv 87 (304)
T 3r7f_A 9 ELSTEEIKD-LLQTAQELKSGKTDNQLTGKFAANLFFEPSTRTRFSFEVAEKKLGMNVLNLDGTSTSVQKGETLYDTIRT 87 (304)
T ss_dssp GSCHHHHHH-HHHHHHHHHTTCCCCTTTTCEEEEEESSCCSHHHHHHHHHHHHTTCEEEEEETTSTTSCSSSCHHHHHHH
T ss_pred hCCHHHHHH-HHHHHHHHHcCCCCccCCCCEEEEEecCCChhHHHhHHHHHHHCCCeEEEECcccccCCCCCCHHHHHHH
Confidence 455555544 33445555542 22356666654 4454 44556678899999999999875432 455667
Q ss_pred HHhcCceEEEEcccchHHHHhhhhhcCceEEEe
Q 014952 120 AIASKAKIIITQAVYNDKVRDLSEHHGARIVTI 152 (415)
Q Consensus 120 l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~i~~ 152 (415)
+...++++|+.=....+.+........+.+|.-
T Consensus 88 Ls~~~~D~iviR~~~~~~~~~la~~~~vPVINa 120 (304)
T 3r7f_A 88 LESIGVDVCVIRHSEDEYYEELVSQVNIPILNA 120 (304)
T ss_dssp HHHHTCCEEEEECSSTTCHHHHHHHCSSCEEES
T ss_pred HHHhcCCEEEEecCChhHHHHHHHhCCCCEEeC
Confidence 777766766654333333344444445565554
No 127
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=27.77 E-value=2.5e+02 Score=24.55 Aligned_cols=71 Identities=15% Similarity=0.103 Sum_probs=44.9
Q ss_pred eeeHHHHHHHHHHH--H-HHH-HHcCCCCCCEEEEEc-CCchhHHHHHHHHHHhCCeEeecCCCCCHHHHHHHHHhcCce
Q 014952 52 VYTYADVELTSRKV--A-AGL-SKLGVQKGDVIMLLL-QNCPQFVFAFLGASYIGATSTTANPFYTPPEIAKQAIASKAK 126 (415)
Q Consensus 52 ~~Ty~el~~~~~~~--a-~~L-~~~g~~~g~~V~i~~-~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~ 126 (415)
.+++.+........ | +.| ...++++|++|+|.. .-.+-..++.+|- ..|+.++.+ . +.+. ...+.+.++.
T Consensus 122 ~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga~g~iG~~~~q~a~-~~Ga~Vi~~-~--~~~~-~~~~~~lGa~ 196 (343)
T 3gaz_A 122 ALTMRQASVLPLVFITAWEGLVDRAQVQDGQTVLIQGGGGGVGHVAIQIAL-ARGARVFAT-A--RGSD-LEYVRDLGAT 196 (343)
T ss_dssp TSCHHHHHTSHHHHHHHHHHHTTTTCCCTTCEEEEETTTSHHHHHHHHHHH-HTTCEEEEE-E--CHHH-HHHHHHHTSE
T ss_pred CCCHHHHHHhhhhHHHHHHHHHHhcCCCCCCEEEEecCCCHHHHHHHHHHH-HCCCEEEEE-e--CHHH-HHHHHHcCCC
Confidence 45666654333222 2 234 446899999999999 5667777766665 578876655 2 3444 3456677777
Q ss_pred E
Q 014952 127 I 127 (415)
Q Consensus 127 ~ 127 (415)
.
T Consensus 197 ~ 197 (343)
T 3gaz_A 197 P 197 (343)
T ss_dssp E
T ss_pred E
Confidence 7
No 128
>4h1h_A LMO1638 protein; MCCF-like, csgid, MCCF homolog, structural genomics, niaid, institute of allergy and infectious diseases; 2.46A {Listeria monocytogenes}
Probab=27.49 E-value=2e+02 Score=25.15 Aligned_cols=61 Identities=18% Similarity=0.147 Sum_probs=35.9
Q ss_pred CCCCCCEEEEEcCCch------hHHHHHHH-HHHhCCeEeecCCCC--------CH----HHHHHHHHhcCceEEEEccc
Q 014952 73 GVQKGDVIMLLLQNCP------QFVFAFLG-ASYIGATSTTANPFY--------TP----PEIAKQAIASKAKIIITQAV 133 (415)
Q Consensus 73 g~~~g~~V~i~~~~~~------~~~~~~lA-~~~~G~~~v~l~~~~--------~~----~~~~~~l~~~~~~~vl~~~~ 133 (415)
-+++||+|+|+.|.+. +.+-.... +-..|..++.-..-. ++ +++...+.+-+++.|++...
T Consensus 8 ~L~~GD~I~ivaPSs~~~~~~~~~~~~~~~~L~~~G~~v~~~~~~~~~~~~~agtd~~Ra~dL~~a~~Dp~i~aI~~~rG 87 (327)
T 4h1h_A 8 KLKQGDEIRIIAPSRSIGIMADNQVEIAVNRLTDMGFKVTFGEHVAEMDCMMSSSIRSRVADIHEAFNDSSVKAILTVIG 87 (327)
T ss_dssp CCCTTCEEEEECSSSCGGGSCHHHHHHHHHHHHHTTCEEEECTTTTCCCTTSSCCHHHHHHHHHHHHHCTTEEEEEESCC
T ss_pred CCCCCCEEEEEeCCCCcCccCHHHHHHHHHHHHhCCCEEEECcchhhccCcccCCHHHHHHHHHHHhhCCCCCEEEEcCC
Confidence 4789999999998642 12211122 234576665432111 11 45666777788899998653
No 129
>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A
Probab=27.20 E-value=3.2e+02 Score=23.97 Aligned_cols=80 Identities=15% Similarity=0.015 Sum_probs=49.7
Q ss_pred eeeHHHHHHHH--HHHH-HHHHH-cCCCCC-CEEEEEcC-CchhHHHHHHHHHHhCCeEeecCCCCCH-HHHHHHHHhcC
Q 014952 52 VYTYADVELTS--RKVA-AGLSK-LGVQKG-DVIMLLLQ-NCPQFVFAFLGASYIGATSTTANPFYTP-PEIAKQAIASK 124 (415)
Q Consensus 52 ~~Ty~el~~~~--~~~a-~~L~~-~g~~~g-~~V~i~~~-~~~~~~~~~lA~~~~G~~~v~l~~~~~~-~~~~~~l~~~~ 124 (415)
.+++.+..... -..| +.|.+ .++++| ++|+|..- -.+-.+++++|-. .|+.++.+..+... ++....+.+.+
T Consensus 138 ~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~~VlV~Ga~G~vG~~aiqlak~-~Ga~vi~~~~~~~~~~~~~~~~~~lG 216 (364)
T 1gu7_A 138 GLTINQGATISVNPLTAYLMLTHYVKLTPGKDWFIQNGGTSAVGKYASQIGKL-LNFNSISVIRDRPNLDEVVASLKELG 216 (364)
T ss_dssp CCCHHHHHTCTTHHHHHHHHHHSSSCCCTTTCEEEESCTTSHHHHHHHHHHHH-HTCEEEEEECCCTTHHHHHHHHHHHT
T ss_pred CCCHHHHhhccccHHHHHHHHHHhhccCCCCcEEEECCCCcHHHHHHHHHHHH-CCCEEEEEecCccccHHHHHHHHhcC
Confidence 46776644322 1222 33444 379999 99999987 6777777777764 68866555332222 33445567788
Q ss_pred ceEEEEcc
Q 014952 125 AKIIITQA 132 (415)
Q Consensus 125 ~~~vl~~~ 132 (415)
++.++...
T Consensus 217 a~~vi~~~ 224 (364)
T 1gu7_A 217 ATQVITED 224 (364)
T ss_dssp CSEEEEHH
T ss_pred CeEEEecC
Confidence 88877643
No 130
>3b8x_A WBDK, pyridoxamine 5-phosphate-dependent dehydrase; aspartate aminotransferase, colitose, perosamine, O-antigen, pyridoxal phosphate,; HET: G4M; 1.70A {Escherichia coli} PDB: 2gms_A* 2gmu_A* 2r0t_A* 3gr9_A*
Probab=27.16 E-value=3.2e+02 Score=24.02 Aligned_cols=54 Identities=15% Similarity=0.157 Sum_probs=33.0
Q ss_pred CCCCCCEEEEEcCCchhHHHHHHHHHHhCCeEeecCCC-----CCHHHHHHHHHhcCceEEEE
Q 014952 73 GVQKGDVIMLLLQNCPQFVFAFLGASYIGATSTTANPF-----YTPPEIAKQAIASKAKIIIT 130 (415)
Q Consensus 73 g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~-----~~~~~~~~~l~~~~~~~vl~ 130 (415)
++++||.|.+..+..... ..++...|+.++.++.+ .+.+.+...+.. +.++|+.
T Consensus 76 ~~~~g~~Vi~~~~~~~~~---~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~i~~-~~~~v~~ 134 (390)
T 3b8x_A 76 RLKKGDEIIVPAVSWSTT---YYPLQQYGLRVKFVDIDINTLNIDIESLKEAVTD-STKAILT 134 (390)
T ss_dssp SCCTTCEEEEESSSCHHH---HHHHHHTTCEEEEECBCTTTCSBCHHHHHHHCCT-TEEEEEE
T ss_pred CCCCcCEEEECCCCcHHH---HHHHHHcCCEEEEEecCccccCcCHHHHHHHhCc-CCeEEEE
Confidence 578899887776654433 33555678776655432 245677766653 4555555
No 131
>2jgn_A DBX, DDX3, ATP-dependent RNA helicase DDX3X; phosphorylation, nucleotide-binding, hydrolase, RNA-binding, ATP-binding, DNA-binding, nuclear protein; 1.91A {Homo sapiens}
Probab=27.08 E-value=1.8e+02 Score=22.67 Aligned_cols=70 Identities=11% Similarity=0.007 Sum_probs=38.3
Q ss_pred HHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHHhCCeEeecCCCCCHHHHHHHHH---hcCceEEEEcc
Q 014952 61 TSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGATSTTANPFYTPPEIAKQAI---ASKAKIIITQA 132 (415)
Q Consensus 61 ~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~---~~~~~~vl~~~ 132 (415)
+...+...|.+.+ ++..+.|++......-...-.+...|..+..++..++..+....++ .-+..++++++
T Consensus 32 K~~~L~~ll~~~~--~~~k~lVF~~~~~~~~~l~~~L~~~g~~~~~lhg~~~~~~r~~~~~~f~~g~~~vLvaT~ 104 (185)
T 2jgn_A 32 KRSFLLDLLNATG--KDSLTLVFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATA 104 (185)
T ss_dssp HHHHHHHHHHHC---CCSCEEEEESCHHHHHHHHHHHHHTTCCEEEEC--------CHHHHHHHHTSSSEEEEEC
T ss_pred HHHHHHHHHHhcC--CCCeEEEEECCHHHHHHHHHHHHHcCCceEEEeCCCCHHHHHHHHHHHHcCCCeEEEEcC
Confidence 3445555566643 5667888888765555555555667888888888777655444443 44566666654
No 132
>2fsx_A RV0390, COG0607: rhodanese-related sulfurtransferase; RV0390 BR SAD DATA with FBAR, structural genomics, PSI; 1.80A {Mycobacterium tuberculosis}
Probab=26.83 E-value=76 Score=23.87 Aligned_cols=47 Identities=13% Similarity=0.019 Sum_probs=28.2
Q ss_pred HHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHHhCCe-EeecCC
Q 014952 63 RKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGAT-STTANP 109 (415)
Q Consensus 63 ~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~-~v~l~~ 109 (415)
.++...|.+.|+.+++.|.++|..+.....+...+...|.. +..++-
T Consensus 66 ~~l~~~l~~~~~~~~~~ivvyC~~G~rS~~aa~~L~~~G~~~v~~l~G 113 (148)
T 2fsx_A 66 AELRDRIPADADQHERPVIFLCRSGNRSIGAAEVATEAGITPAYNVLD 113 (148)
T ss_dssp HHHHHHCC-------CCEEEECSSSSTHHHHHHHHHHTTCCSEEEETT
T ss_pred HHHHHHHhhccCCCCCEEEEEcCCChhHHHHHHHHHHcCCcceEEEcC
Confidence 34444454557778888999999888888888888888874 444443
No 133
>1oft_A SULA, hypothetical protein PA3008; bacterial cell division inhibitor, FTSZ, SULA protein; 2.9A {Pseudomonas aeruginosa} SCOP: c.37.1.22
Probab=26.53 E-value=2.1e+02 Score=22.11 Aligned_cols=36 Identities=14% Similarity=0.206 Sum_probs=18.4
Q ss_pred HHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHHhCC
Q 014952 67 AGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGA 102 (415)
Q Consensus 67 ~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~ 102 (415)
.+|.+.|+.+...+.|...+..+.+.+.-=+++.|.
T Consensus 90 ~~L~~~Gl~~~rll~v~~~~~~daLwa~EqALrsG~ 125 (161)
T 1oft_A 90 EWLRRAGLNRERILLLQAKDNAAALALSCEALRLGR 125 (161)
T ss_dssp HHHHHTTCCGGGEEEECCSSTTHHHHHHHHHHHTTC
T ss_pred HHHHHcCCCHHHEEEEECCChHHHHHHHHHHHhcCC
Confidence 444455555555444544455555555555555554
No 134
>2rkb_A Serine dehydratase-like; PLP bound enzyme, enzyme found in human cells, lyase, pyridoxal phosphate; HET: PLP; 2.80A {Homo sapiens}
Probab=26.51 E-value=1.5e+02 Score=25.70 Aligned_cols=58 Identities=16% Similarity=0.120 Sum_probs=41.2
Q ss_pred CCEEEEEcCCchhHHHHHHHHHHhCCeEeecCCCCCHHHHHHHHHhcCceEEEEcccch
Q 014952 77 GDVIMLLLQNCPQFVFAFLGASYIGATSTTANPFYTPPEIAKQAIASKAKIIITQAVYN 135 (415)
Q Consensus 77 g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~vl~~~~~~ 135 (415)
++.|..... +-.-..+.+++.+.|..++.+-|...++.....++..++++++++....
T Consensus 54 ~~~vv~~ss-GN~g~alA~~a~~~G~~~~i~~p~~~~~~k~~~~~~~Ga~V~~~~~~~~ 111 (318)
T 2rkb_A 54 CRHLVCSSG-GNAGIAAAYAARKLGIPATIVLPESTSLQVVQRLQGEGAEVQLTGKVWD 111 (318)
T ss_dssp CCEEEECCC-SHHHHHHHHHHHHHTCCEEEEECTTCCHHHHHHHHHTTCEEEECCSSHH
T ss_pred CCEEEEECC-chHHHHHHHHHHHcCCCEEEEECCCCcHHHHHHHHhcCCEEEEECCCHH
Confidence 444544443 5556666777889998877776666667777888999999999876543
No 135
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=26.16 E-value=3.7e+02 Score=24.64 Aligned_cols=56 Identities=20% Similarity=0.200 Sum_probs=39.9
Q ss_pred cCCCCCCEEEEEcC-CchhHHHHHHHHHHhCCeEeecCCCCCHHHHHHHHHhcCceEEEEc
Q 014952 72 LGVQKGDVIMLLLQ-NCPQFVFAFLGASYIGATSTTANPFYTPPEIAKQAIASKAKIIITQ 131 (415)
Q Consensus 72 ~g~~~g~~V~i~~~-~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~vl~~ 131 (415)
.++++|++|+|... -.+-.+++++|- ..|+.++.+.. +.+. ...+.+.++..++..
T Consensus 224 ~~~~~g~~VlV~GasG~vG~~avqlak-~~Ga~vi~~~~--~~~~-~~~~~~lGa~~vi~~ 280 (456)
T 3krt_A 224 AGMKQGDNVLIWGASGGLGSYATQFAL-AGGANPICVVS--SPQK-AEICRAMGAEAIIDR 280 (456)
T ss_dssp TCCCTTCEEEETTTTSHHHHHHHHHHH-HTTCEEEEEES--SHHH-HHHHHHHTCCEEEET
T ss_pred cCCCCCCEEEEECCCCHHHHHHHHHHH-HcCCeEEEEEC--CHHH-HHHHHhhCCcEEEec
Confidence 47899999999998 667777766665 57887666653 3444 456677888877754
No 136
>3isl_A Purine catabolism protein PUCG; pyridoxalphosphate, PLP dependent enzymes, purine metabolism transaminases, aminotransferases; HET: PLP; 2.06A {Bacillus subtilis}
Probab=26.11 E-value=3.3e+02 Score=24.07 Aligned_cols=15 Identities=7% Similarity=0.100 Sum_probs=9.3
Q ss_pred ceeeechHHHHHHHh
Q 014952 198 KGVMLTHKGLVTSVA 212 (415)
Q Consensus 198 K~v~~t~~~l~~~~~ 212 (415)
-|+.+....+...+.
T Consensus 206 ~g~~~~~~~~~~~~~ 220 (416)
T 3isl_A 206 MAPITYNERVADVIA 220 (416)
T ss_dssp EEEEEECHHHHHHHH
T ss_pred eEEEEECHHHHHHhh
Confidence 356677777665544
No 137
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=26.10 E-value=1.9e+02 Score=25.63 Aligned_cols=63 Identities=14% Similarity=0.141 Sum_probs=42.4
Q ss_pred HHHHHcCCC-CCCEEEEEcCCchhHHHHHHHHHHhCCeEeecCCCCCHHHHHHHHHhcCceEEEEcc
Q 014952 67 AGLSKLGVQ-KGDVIMLLLQNCPQFVFAFLGASYIGATSTTANPFYTPPEIAKQAIASKAKIIITQA 132 (415)
Q Consensus 67 ~~L~~~g~~-~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~vl~~~ 132 (415)
+.|.+.+++ +|++|+|...-.+-..++.+|- ..|+.++.+.. +.+.+....++.+++.++...
T Consensus 177 ~al~~~~~~~~g~~VlV~GaG~vG~~~~q~a~-~~Ga~Vi~~~~--~~~~~~~~~~~lGa~~v~~~~ 240 (366)
T 1yqd_A 177 SPLKYFGLDEPGKHIGIVGLGGLGHVAVKFAK-AFGSKVTVIST--SPSKKEEALKNFGADSFLVSR 240 (366)
T ss_dssp HHHHHTTCCCTTCEEEEECCSHHHHHHHHHHH-HTTCEEEEEES--CGGGHHHHHHTSCCSEEEETT
T ss_pred HHHHhcCcCCCCCEEEEECCCHHHHHHHHHHH-HCCCEEEEEeC--CHHHHHHHHHhcCCceEEecc
Confidence 345567888 9999999988777777777765 46887655554 334444444467777666543
No 138
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=26.05 E-value=1.7e+02 Score=25.59 Aligned_cols=54 Identities=7% Similarity=-0.051 Sum_probs=38.1
Q ss_pred CCCCCCEEEEEcCCchhHHHHHHHHHHh-CCeEeecCCCCCHHHHHHHHHhcCceEEEE
Q 014952 73 GVQKGDVIMLLLQNCPQFVFAFLGASYI-GATSTTANPFYTPPEIAKQAIASKAKIIIT 130 (415)
Q Consensus 73 g~~~g~~V~i~~~~~~~~~~~~lA~~~~-G~~~v~l~~~~~~~~~~~~l~~~~~~~vl~ 130 (415)
++ +|++|+|...-.+-..++++|-... |+.++.+.. +.+. ..++.+.+++.++.
T Consensus 168 ~~-~g~~VlV~GaG~vG~~aiqlak~~~~Ga~Vi~~~~--~~~~-~~~~~~lGa~~vi~ 222 (344)
T 2h6e_A 168 KF-AEPVVIVNGIGGLAVYTIQILKALMKNITIVGISR--SKKH-RDFALELGADYVSE 222 (344)
T ss_dssp TC-SSCEEEEECCSHHHHHHHHHHHHHCTTCEEEEECS--CHHH-HHHHHHHTCSEEEC
T ss_pred CC-CCCEEEEECCCHHHHHHHHHHHHhcCCCEEEEEeC--CHHH-HHHHHHhCCCEEec
Confidence 78 9999999999777888888776542 887666654 2333 44556677777664
No 139
>3nnk_A Ureidoglycine-glyoxylate aminotransferase; PLP-dependent; HET: LLP; 2.58A {Klebsiella pneumoniae}
Probab=25.91 E-value=2.8e+02 Score=24.48 Aligned_cols=38 Identities=11% Similarity=-0.051 Sum_probs=17.9
Q ss_pred HHHHHHhCCeEeecCCCCCHHHHHHHHHhcCceEEEEc
Q 014952 94 FLGASYIGATSTTANPFYTPPEIAKQAIASKAKIIITQ 131 (415)
Q Consensus 94 ~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~vl~~ 131 (415)
+.++..-|-.++..++.+........+...+..++.+.
T Consensus 81 ~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~g~~~~~v~ 118 (411)
T 3nnk_A 81 LVSAIRPGDKVLVPVFGRFGHLLCEIARRCRAEVHTIE 118 (411)
T ss_dssp HHHHCCTTCEEEEEECSHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHhcCCCCEEEEecCCchHHHHHHHHHHcCCeEEEEe
Confidence 33334445444444444433334455555555555543
No 140
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=25.39 E-value=3e+02 Score=24.23 Aligned_cols=79 Identities=13% Similarity=0.128 Sum_probs=51.1
Q ss_pred eeeHHHHHHHHHH--HHH-HH-HHcCCC-----CCCEEEEEc-CCchhHHHHHHHHHHhCCeEeecCCCCCHHHHHHHHH
Q 014952 52 VYTYADVELTSRK--VAA-GL-SKLGVQ-----KGDVIMLLL-QNCPQFVFAFLGASYIGATSTTANPFYTPPEIAKQAI 121 (415)
Q Consensus 52 ~~Ty~el~~~~~~--~a~-~L-~~~g~~-----~g~~V~i~~-~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~ 121 (415)
.+++.+....... .|. .| ...+++ +|++|+|.. .-.+-.+++.+|-...|+.++.+.. + ++...++.
T Consensus 138 ~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~~~g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~--~-~~~~~~~~ 214 (363)
T 4dvj_A 138 TLDWAEAAALPLTSITAWEAFFDRLDVNKPVPGAAPAILIVGGAGGVGSIAVQIARQRTDLTVIATAS--R-PETQEWVK 214 (363)
T ss_dssp TSCHHHHHTSHHHHHHHHHHHHTTSCTTSCCTTSEEEEEEESTTSHHHHHHHHHHHHHCCSEEEEECS--S-HHHHHHHH
T ss_pred CCCHHHHHhhhhHHHHHHHHHHHhhCcCcCcCCCCCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeC--C-HHHHHHHH
Confidence 3566665443222 222 23 235777 899999998 6778888888877666887776664 2 33445567
Q ss_pred hcCceEEEEccc
Q 014952 122 ASKAKIIITQAV 133 (415)
Q Consensus 122 ~~~~~~vl~~~~ 133 (415)
+.+++.++...+
T Consensus 215 ~lGad~vi~~~~ 226 (363)
T 4dvj_A 215 SLGAHHVIDHSK 226 (363)
T ss_dssp HTTCSEEECTTS
T ss_pred HcCCCEEEeCCC
Confidence 788888876543
No 141
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=25.33 E-value=1.3e+02 Score=26.54 Aligned_cols=62 Identities=13% Similarity=0.101 Sum_probs=41.5
Q ss_pred HHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHHhCCeEeecCCCCCHHHHHHHHHhcCceEEEEcc
Q 014952 67 AGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGATSTTANPFYTPPEIAKQAIASKAKIIITQA 132 (415)
Q Consensus 67 ~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~vl~~~ 132 (415)
+.|.+.++++|++|+|...-.+-..++.+|-. .|+.++.+..+. +. ...+.+.+++.++...
T Consensus 170 ~~l~~~~~~~g~~VlV~GaG~vG~~~~qlak~-~Ga~Vi~~~~~~--~~-~~~~~~lGa~~v~~~~ 231 (360)
T 1piw_A 170 SPLVRNGCGPGKKVGIVGLGGIGSMGTLISKA-MGAETYVISRSS--RK-REDAMKMGADHYIATL 231 (360)
T ss_dssp HHHHHTTCSTTCEEEEECCSHHHHHHHHHHHH-HTCEEEEEESSS--TT-HHHHHHHTCSEEEEGG
T ss_pred HHHHHcCCCCCCEEEEECCCHHHHHHHHHHHH-CCCEEEEEcCCH--HH-HHHHHHcCCCEEEcCc
Confidence 44556789999999999997777777777664 688766555432 22 2344556777776543
No 142
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=24.95 E-value=2.1e+02 Score=24.81 Aligned_cols=59 Identities=7% Similarity=-0.089 Sum_probs=40.2
Q ss_pred HHcCCCCCCEEEEEcC-CchhHHHHHHHHHHhCCeEeecCCCCCHHHHHHHHHhcCceEEEEc
Q 014952 70 SKLGVQKGDVIMLLLQ-NCPQFVFAFLGASYIGATSTTANPFYTPPEIAKQAIASKAKIIITQ 131 (415)
Q Consensus 70 ~~~g~~~g~~V~i~~~-~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~vl~~ 131 (415)
...++++|++|+|... -.+-..++.+|. ..|+.++.+.. +.+.+....++.++..++..
T Consensus 143 ~~~~~~~g~~vlI~Ga~g~iG~~~~~~a~-~~Ga~Vi~~~~--~~~~~~~~~~~~g~~~~~~~ 202 (336)
T 4b7c_A 143 DVGQPKNGETVVISGAAGAVGSVAGQIAR-LKGCRVVGIAG--GAEKCRFLVEELGFDGAIDY 202 (336)
T ss_dssp HTTCCCTTCEEEESSTTSHHHHHHHHHHH-HTTCEEEEEES--SHHHHHHHHHTTCCSEEEET
T ss_pred HhcCCCCCCEEEEECCCCHHHHHHHHHHH-HCCCEEEEEeC--CHHHHHHHHHHcCCCEEEEC
Confidence 3458999999999998 566766666665 57887766653 34555544477777766643
No 143
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=24.94 E-value=1e+02 Score=26.65 Aligned_cols=73 Identities=5% Similarity=0.030 Sum_probs=48.5
Q ss_pred eeeHHHHHHHHHHHH---HHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHHhCCeEeecCCCCCHHHHHHHHHhcCceEE
Q 014952 52 VYTYADVELTSRKVA---AGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGATSTTANPFYTPPEIAKQAIASKAKII 128 (415)
Q Consensus 52 ~~Ty~el~~~~~~~a---~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~v 128 (415)
.+++.+.......++ +.|...++++|++|+|...-.+-.+++++|- ..|+.++.+. + .+. ..++.+.+++.+
T Consensus 115 ~~~~~~aa~l~~~~~ta~~al~~~~~~~g~~VlV~GaG~vG~~a~qlak-~~Ga~Vi~~~-~--~~~-~~~~~~lGa~~v 189 (315)
T 3goh_A 115 NLSFERAAALPCPLLTAWQAFEKIPLTKQREVLIVGFGAVNNLLTQMLN-NAGYVVDLVS-A--SLS-QALAAKRGVRHL 189 (315)
T ss_dssp TSCHHHHHTSHHHHHHHHHHHTTSCCCSCCEEEEECCSHHHHHHHHHHH-HHTCEEEEEC-S--SCC-HHHHHHHTEEEE
T ss_pred CCCHHHHhhCccHHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHH-HcCCEEEEEE-C--hhh-HHHHHHcCCCEE
Confidence 467777653333332 3344468999999999999667777777775 4688777666 2 222 334566788888
Q ss_pred E
Q 014952 129 I 129 (415)
Q Consensus 129 l 129 (415)
+
T Consensus 190 ~ 190 (315)
T 3goh_A 190 Y 190 (315)
T ss_dssp E
T ss_pred E
Confidence 7
No 144
>3tla_A MCCF; serine protease, hydrolase; 1.20A {Escherichia coli} PDB: 3tle_A* 3tlg_A 3tlb_A* 3tlc_A* 3tlz_A* 3tly_A
Probab=24.77 E-value=2.2e+02 Score=25.47 Aligned_cols=62 Identities=15% Similarity=0.095 Sum_probs=36.6
Q ss_pred cCCCCCCEEEEEcCCch------hHHHHHHH-HHHhCCeEeecCCCC--------CH----HHHHHHHHhcCceEEEEcc
Q 014952 72 LGVQKGDVIMLLLQNCP------QFVFAFLG-ASYIGATSTTANPFY--------TP----PEIAKQAIASKAKIIITQA 132 (415)
Q Consensus 72 ~g~~~g~~V~i~~~~~~------~~~~~~lA-~~~~G~~~v~l~~~~--------~~----~~~~~~l~~~~~~~vl~~~ 132 (415)
.-+++||+|+|+.|.+. +.+-.... +-..|..++.-.-.. +. +++...+.+-+++.|++..
T Consensus 38 ~~Lk~GD~I~ivaPSs~~~~~~~~~~~~~~~~L~~~G~~v~~~~~~~~~~~~~agtd~~Ra~dL~~af~Dp~i~aI~~~r 117 (371)
T 3tla_A 38 APLAVGDTIGFFSSSAPATVTAKNRFFRGVEFLQRKGFKLVSGKLTGKTDFYRSGTIKERAQEFNELVYNPDITCIMSTI 117 (371)
T ss_dssp CCCCTTCEEEEECSSCCHHHHTHHHHHHHHHHHHHTTCEEEECTTTTCCBTTBSSCHHHHHHHHHHHHTCTTEEEEEESC
T ss_pred CCCCCcCEEEEEeCCCCccccCHHHHHHHHHHHHhCCCEEEECCchhcccCccCCCHHHHHHHHHHHhhCCCCCEEEEcc
Confidence 36889999999999763 12222222 223577766432111 11 4556666667888999865
Q ss_pred c
Q 014952 133 V 133 (415)
Q Consensus 133 ~ 133 (415)
.
T Consensus 118 G 118 (371)
T 3tla_A 118 G 118 (371)
T ss_dssp C
T ss_pred c
Confidence 3
No 145
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=24.77 E-value=2.3e+02 Score=24.75 Aligned_cols=61 Identities=11% Similarity=0.121 Sum_probs=40.9
Q ss_pred HHHHHcCCCCCCEEEEEcCC-chhHHHHHHHHHHhCCeEeecCCCCCHHHHHHHHHhcCceEEEE
Q 014952 67 AGLSKLGVQKGDVIMLLLQN-CPQFVFAFLGASYIGATSTTANPFYTPPEIAKQAIASKAKIIIT 130 (415)
Q Consensus 67 ~~L~~~g~~~g~~V~i~~~~-~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~vl~ 130 (415)
+.|.+.++++|++|+|.... .+-..++.++....|+.++.++. +.+.+ ..+.+.++..++.
T Consensus 161 ~~l~~~~~~~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~--~~~~~-~~~~~~g~~~~~~ 222 (347)
T 1jvb_A 161 RAVRKASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDV--REEAV-EAAKRAGADYVIN 222 (347)
T ss_dssp HHHHHTTCCTTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEES--SHHHH-HHHHHHTCSEEEE
T ss_pred HHHHhcCCCCCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcC--CHHHH-HHHHHhCCCEEec
Confidence 34555789999999999987 67777777776543887666654 23333 3445566666654
No 146
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=24.59 E-value=2e+02 Score=25.03 Aligned_cols=60 Identities=12% Similarity=0.138 Sum_probs=40.8
Q ss_pred HHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHHhCCeEeecCCCCCHHHHHHHHHhcCceEEEE
Q 014952 67 AGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGATSTTANPFYTPPEIAKQAIASKAKIIIT 130 (415)
Q Consensus 67 ~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~vl~ 130 (415)
+.|.+.++++|++|+|...-++-..++.+|- ..|+.++.+.. +.+.+ ..+.+.+++.++.
T Consensus 155 ~~l~~~~~~~g~~VlV~GaG~vG~~~~~~a~-~~Ga~Vi~~~~--~~~~~-~~~~~lGa~~~~d 214 (339)
T 1rjw_A 155 KALKVTGAKPGEWVAIYGIGGLGHVAVQYAK-AMGLNVVAVDI--GDEKL-ELAKELGADLVVN 214 (339)
T ss_dssp HHHHHHTCCTTCEEEEECCSTTHHHHHHHHH-HTTCEEEEECS--CHHHH-HHHHHTTCSEEEC
T ss_pred HHHHhcCCCCCCEEEEECCCHHHHHHHHHHH-HcCCEEEEEeC--CHHHH-HHHHHCCCCEEec
Confidence 3455568999999999998777777777765 46887666654 33333 3455677766553
No 147
>1eg5_A Aminotransferase; PLP-dependent enzymes, iron-sulfur-cluster synthesis, C-S BE transferase; HET: PLP; 2.00A {Thermotoga maritima} SCOP: c.67.1.3 PDB: 1ecx_A*
Probab=24.52 E-value=2.8e+02 Score=24.11 Aligned_cols=55 Identities=9% Similarity=-0.055 Sum_probs=26.2
Q ss_pred CCCCEEEEEcCCchhHHHHHHHHHHhCCeEeecCCC----CCHHHHHHHHHhcCceEEEE
Q 014952 75 QKGDVIMLLLQNCPQFVFAFLGASYIGATSTTANPF----YTPPEIAKQAIASKAKIIIT 130 (415)
Q Consensus 75 ~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~----~~~~~~~~~l~~~~~~~vl~ 130 (415)
++||.|.+..+....+.-...++...|+.++.++.+ .+.+++...+.. ++++|+.
T Consensus 87 ~~gd~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-~~~~v~~ 145 (384)
T 1eg5_A 87 KRKRTIITTPIEHKAVLETMKYLSMKGFKVKYVPVDSRGVVKLEELEKLVDE-DTFLVSI 145 (384)
T ss_dssp TTCCEEEECTTSCHHHHHHHHHHHHTTCEEEECCBCTTSCBCHHHHHHHCCT-TEEEEEE
T ss_pred CCCCEEEECCCCchHHHHHHHHHHhcCCEEEEEccCCCCccCHHHHHHHhCC-CCeEEEE
Confidence 466666655544333333333334556655554432 234555555533 4445443
No 148
>3hvy_A Cystathionine beta-lyase family protein, YNBB B.S ortholog; NP_348457.1, putative cystathionine beta-lyase involved in A resistance; HET: LLP MSE; 2.00A {Clostridium acetobutylicum}
Probab=24.49 E-value=3.9e+02 Score=24.31 Aligned_cols=59 Identities=10% Similarity=0.066 Sum_probs=36.6
Q ss_pred CCCCCEEEEEcCCchhHHHHHH---------HHHHhCCeEeecCCC---CCHHHHHHHHHh-cCceEEEEcc
Q 014952 74 VQKGDVIMLLLQNCPQFVFAFL---------GASYIGATSTTANPF---YTPPEIAKQAIA-SKAKIIITQA 132 (415)
Q Consensus 74 ~~~g~~V~i~~~~~~~~~~~~l---------A~~~~G~~~v~l~~~---~~~~~~~~~l~~-~~~~~vl~~~ 132 (415)
+++||.|.+...........++ .+...|+.+..++.. .+.+.+...+.+ .++++|+++.
T Consensus 113 l~pGD~Vl~~~~~~y~~~~~~~g~~~~~~~~~l~~~G~~~~~v~~~~~~~d~e~l~~~i~~~~~tklV~i~~ 184 (427)
T 3hvy_A 113 LRPNDTMMSICGMPYDTLHDIIGMDDSKKVGSLREYGVKYKMVDLKDGKVDINTVKEELKKDDSIKLIHIQR 184 (427)
T ss_dssp CCTTCEEEECSSSCCGGGHHHHTCCTTCCSCCTGGGTCEEEECCCBTTBCCHHHHHHHHHHCTTEEEEEEES
T ss_pred cCCCCEEEEeCCCCchhHHHHhccccchhhhHHHHcCCEEEEecCCCCCcCHHHHHHHhhCCCCCEEEEEEC
Confidence 6789988776512333222222 234568887777652 456778887764 5778888766
No 149
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=24.32 E-value=3.3e+02 Score=24.02 Aligned_cols=77 Identities=13% Similarity=-0.007 Sum_probs=47.2
Q ss_pred eeeHHHHHHHHHHH--HH-HH-HHcCCCCCCEEEEEcCCchhHHHHHHHHHHhCC-eEeecCCCCCHHHHHHHHHhcCce
Q 014952 52 VYTYADVELTSRKV--AA-GL-SKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGA-TSTTANPFYTPPEIAKQAIASKAK 126 (415)
Q Consensus 52 ~~Ty~el~~~~~~~--a~-~L-~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~-~~v~l~~~~~~~~~~~~l~~~~~~ 126 (415)
.+++.+.......+ |. .+ ...++++|++|+|...-.+-.+++++|-. .|+ .++.++.+ .+. ..++.+.+++
T Consensus 167 ~l~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~GaG~vG~~aiqlak~-~Ga~~Vi~~~~~--~~~-~~~a~~lGa~ 242 (376)
T 1e3i_A 167 EANLERVCLIGCGFSSGYGAAINTAKVTPGSTCAVFGLGCVGLSAIIGCKI-AGASRIIAIDIN--GEK-FPKAKALGAT 242 (376)
T ss_dssp TCCHHHHGGGGTHHHHHHHHHHTTSCCCTTCEEEEECCSHHHHHHHHHHHH-TTCSEEEEECSC--GGG-HHHHHHTTCS
T ss_pred CCCHHHhhhhccHHHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHH-cCCCeEEEEcCC--HHH-HHHHHHhCCc
Confidence 36676654332222 22 23 34589999999999976677777777664 687 56555542 233 3445677887
Q ss_pred EEEEcc
Q 014952 127 IIITQA 132 (415)
Q Consensus 127 ~vl~~~ 132 (415)
.++...
T Consensus 243 ~vi~~~ 248 (376)
T 1e3i_A 243 DCLNPR 248 (376)
T ss_dssp EEECGG
T ss_pred EEEccc
Confidence 777543
No 150
>1urh_A 3-mercaptopyruvate sulfurtransferase; rhodanese; 2.8A {Escherichia coli} SCOP: c.46.1.2 c.46.1.2
Probab=24.30 E-value=1.1e+02 Score=25.82 Aligned_cols=41 Identities=15% Similarity=0.161 Sum_probs=31.3
Q ss_pred HHHHHHHHHcCCCCCCEEEEEcCCchh-HHHHHHHHHHhCCe
Q 014952 63 RKVAAGLSKLGVQKGDVIMLLLQNCPQ-FVFAFLGASYIGAT 103 (415)
Q Consensus 63 ~~~a~~L~~~g~~~g~~V~i~~~~~~~-~~~~~lA~~~~G~~ 103 (415)
..++..+.++|+.+++.|.++|..+.. ...+.+.+...|..
T Consensus 72 ~~~~~~~~~~gi~~~~~ivvyc~~g~~~a~~a~~~L~~~G~~ 113 (280)
T 1urh_A 72 ETFAVAMRELGVNQDKHLIVYDEGNLFSAPRAWWMLRTFGVE 113 (280)
T ss_dssp HHHHHHHHHTTCCTTSEEEEECSSSCSSHHHHHHHHHHTTCS
T ss_pred HHHHHHHHHcCCCCCCeEEEECCCCCccHHHHHHHHHHcCCC
Confidence 556677778889889999999987665 66666777778873
No 151
>1p5j_A L-serine dehydratase; lyase; HET: PLP; 2.50A {Homo sapiens} SCOP: c.79.1.1 PDB: 1pwh_A* 1pwe_A*
Probab=24.24 E-value=1.7e+02 Score=26.21 Aligned_cols=58 Identities=14% Similarity=0.033 Sum_probs=41.4
Q ss_pred CCEEEEEcCCchhHHHHHHHHHHhCCeEeecCCCCCHHHHHHHHHhcCceEEEEcccch
Q 014952 77 GDVIMLLLQNCPQFVFAFLGASYIGATSTTANPFYTPPEIAKQAIASKAKIIITQAVYN 135 (415)
Q Consensus 77 g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~vl~~~~~~ 135 (415)
++.|..... +-.-..+.++|.+.|..++.+-|...+......++..++++++++....
T Consensus 93 ~~~vv~aSs-GN~g~alA~aa~~~G~~~~iv~p~~~~~~k~~~~~~~GA~V~~~~~~~~ 150 (372)
T 1p5j_A 93 CAHFVCSSA-GNAGMAAAYAARQLGVPATIVVPGTTPALTIERLKNEGATCKVVGELLD 150 (372)
T ss_dssp CCEEEECCS-SHHHHHHHHHHHHHTCCEEEEECTTCCHHHHHHHHHTTCEEEECCSCHH
T ss_pred CCEEEEeCC-CHHHHHHHHHHHHcCCcEEEEECCCCCHHHHHHHHhcCCEEEEECCCHH
Confidence 444444443 5555666677889998887777766667777888999999999886543
No 152
>3ujp_A Mn transporter subunit; manganese binding protein, metal binding protein; 2.70A {Synechocystis SP} PDB: 1xvl_A 3v63_A
Probab=24.20 E-value=1.8e+02 Score=25.25 Aligned_cols=92 Identities=15% Similarity=0.189 Sum_probs=52.0
Q ss_pred HHHHHHHHHHHHHHHHc--CCCCCCEEEEEcCCchhHHHHHHHHHHhCCeEeecCCC--CCHH---HHHHHHHhcCceEE
Q 014952 56 ADVELTSRKVAAGLSKL--GVQKGDVIMLLLQNCPQFVFAFLGASYIGATSTTANPF--YTPP---EIAKQAIASKAKII 128 (415)
Q Consensus 56 ~el~~~~~~~a~~L~~~--g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~--~~~~---~~~~~l~~~~~~~v 128 (415)
.++.++.+.+-..+++. .+....+..+..++...++.-.+++-..+. ..+.+. -++. ++...+++.++++|
T Consensus 166 ~~~~~~L~~Ld~~~~~~l~~~p~~~~~~v~~H~af~Yfa~~yGl~~~~~--~~i~~~~ePs~~~l~~l~~~ik~~~v~~I 243 (307)
T 3ujp_A 166 AVYSEQLKAIDRQLGADLEQVPANQRFLVSCEGAFSYLARDYGMEEIYM--WPINAEQQFTPKQVQTVIEEVKTNNVPTI 243 (307)
T ss_dssp HHHHHHHHHHHHHHHHHHSSSCGGGCEEEEEESTTHHHHHHTTCEEEEE--ESSCCSSCCCHHHHHHHHHHHHTTTCSEE
T ss_pred HHHHHHHHHHHHHHHHHHhhccccCCEEEEECchHHHHHHHCCCcEEEe--eccCCCCCCCHHHHHHHHHHHHhcCCcEE
Confidence 33444444444444442 333345677778888888887777765522 234433 2333 45556667899999
Q ss_pred EEcccchHH-HHhhhhhcCceE
Q 014952 129 ITQAVYNDK-VRDLSEHHGARI 149 (415)
Q Consensus 129 l~~~~~~~~-~~~~~~~~~~~~ 149 (415)
|++.....+ +..+.+..+.++
T Consensus 244 f~e~~~~~k~~~~ia~e~g~~v 265 (307)
T 3ujp_A 244 FCESTVSDKGQKQVAQATGARF 265 (307)
T ss_dssp EEETTSCSHHHHHTTTTTCCEE
T ss_pred EEeCCCChHHHHHHHHHhCCce
Confidence 998754443 344444444443
No 153
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=24.15 E-value=2.2e+02 Score=25.31 Aligned_cols=77 Identities=12% Similarity=-0.003 Sum_probs=48.4
Q ss_pred eeeHHHHHHHHHHHH--H-HH-HHcCCCCCCEEEEEcCCchhHHHHHHHHHHhCC-eEeecCCCCCHHHHHHHHHhcCce
Q 014952 52 VYTYADVELTSRKVA--A-GL-SKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGA-TSTTANPFYTPPEIAKQAIASKAK 126 (415)
Q Consensus 52 ~~Ty~el~~~~~~~a--~-~L-~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~-~~v~l~~~~~~~~~~~~l~~~~~~ 126 (415)
.+++.+.......+. . .+ ...++++|++|+|...-.+-.+++++|- ..|+ .++.++.+. +. ..++.+.+++
T Consensus 165 ~~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlV~GaG~vG~~a~q~a~-~~Ga~~Vi~~~~~~--~~-~~~a~~lGa~ 240 (378)
T 3uko_A 165 TAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSNVAIFGLGTVGLAVAEGAK-TAGASRIIGIDIDS--KK-YETAKKFGVN 240 (378)
T ss_dssp TSCHHHHGGGGTHHHHHHHHHHTTTCCCTTCCEEEECCSHHHHHHHHHHH-HHTCSCEEEECSCT--TH-HHHHHTTTCC
T ss_pred CCCHHHhhhhhhhHHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHH-HcCCCeEEEEcCCH--HH-HHHHHHcCCc
Confidence 456666544322222 2 13 3458999999999988667777777765 5687 566665432 33 3366778888
Q ss_pred EEEEcc
Q 014952 127 IIITQA 132 (415)
Q Consensus 127 ~vl~~~ 132 (415)
.++...
T Consensus 241 ~vi~~~ 246 (378)
T 3uko_A 241 EFVNPK 246 (378)
T ss_dssp EEECGG
T ss_pred EEEccc
Confidence 777543
No 154
>3aey_A Threonine synthase; PLP, pyridoxal phosphate, lyase; 1.92A {Thermus thermophilus} PDB: 1uin_A* 1uim_A* 3aex_A* 1v7c_A
Probab=24.07 E-value=1.7e+02 Score=25.91 Aligned_cols=90 Identities=12% Similarity=0.051 Sum_probs=51.5
Q ss_pred CCcEEEeCCCCCeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHHhCCeEeecCCCC-CHHHHHH
Q 014952 40 DRPCIINGPTGDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGATSTTANPFY-TPPEIAK 118 (415)
Q Consensus 40 ~~~a~~~~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~-~~~~~~~ 118 (415)
-++.+-.++.+..-++++.-. ...+... .+.|. +.|.. ...+-.-..+.+++.+.|..++.+-|.. .+.....
T Consensus 45 ~~v~~K~E~~~ptgS~KdR~a-~~~l~~a-~~~g~---~~vv~-~SsGN~g~alA~~a~~~G~~~~iv~p~~~~~~~k~~ 118 (351)
T 3aey_A 45 IRLYAKYEGLNPTGSFKDRGM-TLAVSKA-VEGGA---QAVAC-ASTGNTAASAAAYAARAGILAIVVLPAGYVALGKVA 118 (351)
T ss_dssp CEEEEEEGGGSTTSBTTHHHH-HHHHHHH-HHTTC---SEEEE-SCSSHHHHHHHHHHHHHTSEEEEEEETTCSCHHHHH
T ss_pred CeEEEEecCCCCcccHHHHHH-HHHHHHH-HhcCC---CEEEE-eCCCHHHHHHHHHHHHcCCCEEEEECCCCCCHHHHH
Confidence 345554443344445554322 1222222 23342 33333 3444445556688889998877766654 5566667
Q ss_pred HHHhcCceEEEEcccch
Q 014952 119 QAIASKAKIIITQAVYN 135 (415)
Q Consensus 119 ~l~~~~~~~vl~~~~~~ 135 (415)
.++..++++++++....
T Consensus 119 ~~~~~GA~V~~v~~~~~ 135 (351)
T 3aey_A 119 QSLVHGARIVQVEGNFD 135 (351)
T ss_dssp HHHHTTCEEEEEESCHH
T ss_pred HHHHcCCEEEEECCCHH
Confidence 88899999999986543
No 155
>1uar_A Rhodanese; sulfurtransferase, riken structural genomics/PROT initiative, RSGI, structural genomics, transferase; 1.70A {Thermus thermophilus} SCOP: c.46.1.2 c.46.1.2
Probab=24.05 E-value=1.1e+02 Score=26.06 Aligned_cols=41 Identities=15% Similarity=0.220 Sum_probs=33.8
Q ss_pred HHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHH-HhCCe
Q 014952 63 RKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGAS-YIGAT 103 (415)
Q Consensus 63 ~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~-~~G~~ 103 (415)
..+...+.++|+.+++.|.++|..+.....+.+.+. .+|..
T Consensus 219 ~~l~~~~~~~g~~~~~~ivvyC~~G~rs~~a~~~L~~~~G~~ 260 (285)
T 1uar_A 219 EELRALYEPLGITKDKDIVVYCRIAERSSHSWFVLKYLLGYP 260 (285)
T ss_dssp HHHHHHHGGGTCCTTSEEEEECSSHHHHHHHHHHHHTTSCCS
T ss_pred HHHHHHHHHcCCCCCCCEEEECCchHHHHHHHHHHHHHcCCC
Confidence 455667777889999999999999988888888888 88873
No 156
>3ri6_A O-acetylhomoserine sulfhydrylase; PYR 5'-phosphate, gamma-elimination, direct sulfhydrylation, CY metabolism, protein thiocarboxylate, TR; 2.20A {Wolinella succinogenes}
Probab=23.96 E-value=3.2e+02 Score=24.92 Aligned_cols=71 Identities=11% Similarity=0.134 Sum_probs=36.6
Q ss_pred EEEcCCchhHHH-HHHHHHHhCCeEeecCCCCCHH--HHHHHHHhcCceEEEEcccchHHHHhhhhhcCceEEEe
Q 014952 81 MLLLQNCPQFVF-AFLGASYIGATSTTANPFYTPP--EIAKQAIASKAKIIITQAVYNDKVRDLSEHHGARIVTI 152 (415)
Q Consensus 81 ~i~~~~~~~~~~-~~lA~~~~G~~~v~l~~~~~~~--~~~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~i~~ 152 (415)
+++..++.+.+. ++.++.+.|-.++..++.+..- .+...+...+.+++.++....+.+.+.... +.+.|.+
T Consensus 100 ~v~~~sG~~Ai~~al~al~~~Gd~Vi~~~~~y~~~~~~~~~~~~~~G~~~~~v~~~d~~~l~~ai~~-~t~~v~~ 173 (430)
T 3ri6_A 100 VLALGSGMAAISTAILTLARAGDSVVTTDRLFGHTLSLFQKTLPSFGIEVRFVDVMDSLAVEHACDE-TTKLLFL 173 (430)
T ss_dssp EEEESCHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHHTHHHHTTCEEEEECTTCHHHHHHHCCT-TEEEEEE
T ss_pred EEEECCHHHHHHHHHHHHhCCCCEEEEcCCCchhHHHHHHHHHHHcCCEEEEeCCCCHHHHHHhhCC-CCeEEEE
Confidence 444555555544 3344555666666556655432 222255667777777765544444443322 2344444
No 157
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=23.65 E-value=3.8e+02 Score=23.60 Aligned_cols=59 Identities=12% Similarity=0.021 Sum_probs=40.1
Q ss_pred HHcCCCCCCEEEEEcCCchhHHHHHHHHHHhCC-eEeecCCCCCHHHHHHHHHhcCceEEEEcc
Q 014952 70 SKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGA-TSTTANPFYTPPEIAKQAIASKAKIIITQA 132 (415)
Q Consensus 70 ~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~-~~v~l~~~~~~~~~~~~l~~~~~~~vl~~~ 132 (415)
...++++|++|+|...-.+-..++++|-. .|+ .++.++. + ++...++++.+++.++...
T Consensus 184 ~~~~~~~g~~VlV~GaG~vG~~a~qlak~-~Ga~~Vi~~~~--~-~~~~~~a~~lGa~~vi~~~ 243 (371)
T 1f8f_A 184 NALKVTPASSFVTWGAGAVGLSALLAAKV-CGASIIIAVDI--V-ESRLELAKQLGATHVINSK 243 (371)
T ss_dssp TTTCCCTTCEEEEESCSHHHHHHHHHHHH-HTCSEEEEEES--C-HHHHHHHHHHTCSEEEETT
T ss_pred hccCCCCCCEEEEECCCHHHHHHHHHHHH-cCCCeEEEECC--C-HHHHHHHHHcCCCEEecCC
Confidence 34589999999999876677777777654 687 4555543 2 3334456677888777543
No 158
>1e0c_A Rhodanese, sulfurtransferase; sulfur metabolism, thiosulfate:cyanide sulfurtransferase; 1.8A {Azotobacter vinelandii} SCOP: c.46.1.2 c.46.1.2 PDB: 1h4k_X 1h4m_X
Probab=23.48 E-value=1.2e+02 Score=25.50 Aligned_cols=41 Identities=12% Similarity=0.030 Sum_probs=30.3
Q ss_pred HHHHHHHHHcCCCCCCEEEEEcCCch-hHHHHHHHHHHhCCe
Q 014952 63 RKVAAGLSKLGVQKGDVIMLLLQNCP-QFVFAFLGASYIGAT 103 (415)
Q Consensus 63 ~~~a~~L~~~g~~~g~~V~i~~~~~~-~~~~~~lA~~~~G~~ 103 (415)
..++..+.++|+.+++.|.++|..+. ....+...+...|..
T Consensus 67 ~~~~~~~~~~gi~~~~~vvvyc~~g~~~s~~a~~~L~~~G~~ 108 (271)
T 1e0c_A 67 EQLESLFGELGHRPEAVYVVYDDEGGGWAGRFIWLLDVIGQQ 108 (271)
T ss_dssp HHHHHHHHHHTCCTTCEEEEECSSSSHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHcCCCCCCeEEEEcCCCCccHHHHHHHHHHcCCC
Confidence 46677777778888888999888765 555666667777764
No 159
>1ve1_A O-acetylserine sulfhydrylase; PLP, transferase, riken structural genomics/proteomics initi RSGI, structural genomics; HET: PLP; 1.45A {Thermus thermophilus} SCOP: c.79.1.1 PDB: 2eco_A* 2ecq_A* 2efy_A*
Probab=23.41 E-value=3.5e+02 Score=23.11 Aligned_cols=64 Identities=17% Similarity=0.085 Sum_probs=43.8
Q ss_pred HHHcC-CCCCC--EEEEEcCCchhHHHHHHHHHHhCCeEeecCCCCCHHHHHHHHHhcCceEEEEccc
Q 014952 69 LSKLG-VQKGD--VIMLLLQNCPQFVFAFLGASYIGATSTTANPFYTPPEIAKQAIASKAKIIITQAV 133 (415)
Q Consensus 69 L~~~g-~~~g~--~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~vl~~~~ 133 (415)
+.+.| +++|+ .|.. ...+-.-..+.+++.+.|..++.+-|...+......++..++++++++..
T Consensus 51 a~~~g~~~~g~~~~vv~-assGN~g~a~A~~a~~~G~~~~i~~p~~~~~~k~~~~~~~Ga~V~~~~~~ 117 (304)
T 1ve1_A 51 AEERGILRPGSGQVIVE-PTSGNTGIGLAMIAASRGYRLILTMPAQMSEERKRVLKAFGAELVLTDPE 117 (304)
T ss_dssp HHHTTSCCTTSCCEEEE-SCCSHHHHHHHHHHHHHTCEEEEEEETTCCHHHHHHHHHTTCEEEEECTT
T ss_pred HHHcCCCCCCCccEEEE-eCCcHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHcCCEEEEECCC
Confidence 33445 45666 5544 44455555666777899987777666555666777888999999998764
No 160
>3nvb_A Uncharacterized protein; protein FKBH, protein fkbhstructural genomics, PSI-2, protei structure initiative; 1.71A {Bacteroides fragilis} PDB: 3slr_A
Probab=23.36 E-value=4.1e+02 Score=23.92 Aligned_cols=93 Identities=9% Similarity=-0.033 Sum_probs=60.7
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHH------HHhCCeEeecCCCCCHHHHHHHHHhcCc---e
Q 014952 56 ADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGA------SYIGATSTTANPFYTPPEIAKQAIASKA---K 126 (415)
Q Consensus 56 ~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~------~~~G~~~v~l~~~~~~~~~~~~l~~~~~---~ 126 (415)
++++..+..+-..|+++|+ .++|+..|..+.+...+.- -..+...+..+..-.++.+.+++++.+. .
T Consensus 255 g~~ypgv~e~L~~Lk~~Gi----~laI~Snn~~~~v~~~l~~~~~~~l~l~~~~~v~~~~KPKp~~l~~al~~Lgl~pee 330 (387)
T 3nvb_A 255 GKAFTEFQEWVKKLKNRGI----IIAVCSKNNEGKAKEPFERNPEMVLKLDDIAVFVANWENKADNIRTIQRTLNIGFDS 330 (387)
T ss_dssp HHHHHHHHHHHHHHHHTTC----EEEEEEESCHHHHHHHHHHCTTCSSCGGGCSEEEEESSCHHHHHHHHHHHHTCCGGG
T ss_pred cccCHHHHHHHHHHHHCCC----EEEEEcCCCHHHHHHHHhhccccccCccCccEEEeCCCCcHHHHHHHHHHhCcCccc
Confidence 4777888888888988765 5999999998887777753 2345555555555456777888877654 5
Q ss_pred EEEEcccchHHHHhhhhhcCceEEEe
Q 014952 127 IIITQAVYNDKVRDLSEHHGARIVTI 152 (415)
Q Consensus 127 ~vl~~~~~~~~~~~~~~~~~~~~i~~ 152 (415)
+++++++..+.-.......++.++.+
T Consensus 331 ~v~VGDs~~Di~aaraalpgV~vi~~ 356 (387)
T 3nvb_A 331 MVFLDDNPFERNMVREHVPGVTVPEL 356 (387)
T ss_dssp EEEECSCHHHHHHHHHHSTTCBCCCC
T ss_pred EEEECCCHHHHHHHHhcCCCeEEEEc
Confidence 67777766554333222234444444
No 161
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=23.09 E-value=3.6e+02 Score=23.76 Aligned_cols=77 Identities=12% Similarity=-0.000 Sum_probs=46.9
Q ss_pred eeeHHHHHHHHHHHH--H-HH-HHcCCCCCCEEEEEcCCchhHHHHHHHHHHhCC-eEeecCCCCCHHHHHHHHHhcCce
Q 014952 52 VYTYADVELTSRKVA--A-GL-SKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGA-TSTTANPFYTPPEIAKQAIASKAK 126 (415)
Q Consensus 52 ~~Ty~el~~~~~~~a--~-~L-~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~-~~v~l~~~~~~~~~~~~l~~~~~~ 126 (415)
.+++.+.......++ . .+ ...++++|++|+|...-.+-.+++++|-. .|+ .++.++.+ .+. ..++.+.+++
T Consensus 162 ~l~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~GaG~vG~~avqla~~-~Ga~~Vi~~~~~--~~~-~~~~~~lGa~ 237 (373)
T 2fzw_A 162 LAPLDKVCLLGCGISTGYGAAVNTAKLEPGSVCAVFGLGGVGLAVIMGCKV-AGASRIIGVDIN--KDK-FARAKEFGAT 237 (373)
T ss_dssp TSCHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHH-HTCSEEEEECSC--GGG-HHHHHHHTCS
T ss_pred CCCHHHHhhhccHHHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHH-cCCCeEEEEcCC--HHH-HHHHHHcCCc
Confidence 366666443322222 1 23 34589999999999977777777777765 687 56555542 222 3345567777
Q ss_pred EEEEcc
Q 014952 127 IIITQA 132 (415)
Q Consensus 127 ~vl~~~ 132 (415)
.++...
T Consensus 238 ~vi~~~ 243 (373)
T 2fzw_A 238 ECINPQ 243 (373)
T ss_dssp EEECGG
T ss_pred eEeccc
Confidence 776543
No 162
>3i16_A Aluminum resistance protein; YP_878183.1, carbon-sulfur lyase involved in aluminum resist structural genomics; HET: MSE TLA PLP; 2.00A {Clostridium novyi} PDB: 3gwp_A*
Probab=23.02 E-value=2.4e+02 Score=25.80 Aligned_cols=59 Identities=10% Similarity=0.092 Sum_probs=35.5
Q ss_pred CCCCCEEEEEcCCchhHHHHHH---------HHHHhCCeEeecCCC----CCHHHHHHHHHh-cCceEEEEcc
Q 014952 74 VQKGDVIMLLLQNCPQFVFAFL---------GASYIGATSTTANPF----YTPPEIAKQAIA-SKAKIIITQA 132 (415)
Q Consensus 74 ~~~g~~V~i~~~~~~~~~~~~l---------A~~~~G~~~v~l~~~----~~~~~~~~~l~~-~~~~~vl~~~ 132 (415)
+++||.|.+...........++ .+...|+.+..++.+ .+.+.+...+.+ .+.++|++..
T Consensus 112 l~pGD~Vl~~~~~~y~~~~~~~g~~~~~~~~~l~~~G~~~~~v~~~~~g~~D~e~l~~~l~~~~~tklV~i~~ 184 (427)
T 3i16_A 112 LRPGNTMLSVCGEPYDTLHDVIGITENSNMGSLKEFGINYKQVDLKEDGKPNLEEIEKVLKEDESITLVHIQR 184 (427)
T ss_dssp CCTTCEEEESSSSCCGGGHHHHTCSCCCSSCCTGGGTCEEEECCCCTTSSCCHHHHHHHHHTCTTEEEEEEEC
T ss_pred hCCCCEEEEeCCCccHHHHHHHhccccchHHHHHHcCCEEEEecCccCCCcCHHHHHHHhhCCCCCEEEEEEc
Confidence 5688987776512222222222 234568877777653 566778877764 5677777765
No 163
>1e0c_A Rhodanese, sulfurtransferase; sulfur metabolism, thiosulfate:cyanide sulfurtransferase; 1.8A {Azotobacter vinelandii} SCOP: c.46.1.2 c.46.1.2 PDB: 1h4k_X 1h4m_X
Probab=22.53 E-value=1.3e+02 Score=25.33 Aligned_cols=40 Identities=23% Similarity=0.290 Sum_probs=33.6
Q ss_pred HHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHHhCCe
Q 014952 64 KVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGAT 103 (415)
Q Consensus 64 ~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~ 103 (415)
.+...+.+.|+.+++.|.++|..+.....+.+.+..+|..
T Consensus 210 ~l~~~~~~~~~~~~~~ivvyC~~G~rs~~a~~~L~~~G~~ 249 (271)
T 1e0c_A 210 DIAGRLEELGITPDKEIVTHCQTHHRSGLTYLIAKALGYP 249 (271)
T ss_dssp THHHHHHHTTCCTTSEEEEECSSSSHHHHHHHHHHHTTCS
T ss_pred HHHHHHHHcCCCCCCCEEEECCchHHHHHHHHHHHHcCCC
Confidence 4455566778999999999999998888888999999975
No 164
>2wlr_A Putative thiosulfate sulfurtransferase YNJE; rhodanese domains; HET: EPE; 1.45A {Escherichia coli} PDB: 2wlx_A* 3ipo_A* 3ipp_A
Probab=22.52 E-value=1.4e+02 Score=27.17 Aligned_cols=57 Identities=16% Similarity=0.163 Sum_probs=42.7
Q ss_pred eeeHHHHHH-------HHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHHhCCe-EeecC
Q 014952 52 VYTYADVEL-------TSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGAT-STTAN 108 (415)
Q Consensus 52 ~~Ty~el~~-------~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~-~v~l~ 108 (415)
.+.+.++.. ....+...+.+.|+.+++.|.++|..+.....+.+++..+|.. +..++
T Consensus 171 nip~~~~~~~~~~~~~~~~~l~~~~~~~gi~~~~~ivvyC~~G~~a~~~~~~L~~~G~~~v~~l~ 235 (423)
T 2wlr_A 171 YIDTNEVESEPLWNKVSDEQLKAMLAKHGIRHDTTVILYGRDVYAAARVAQIMLYAGVKDVRLLD 235 (423)
T ss_dssp EEEGGGTEETTTTEECCHHHHHHHHHHTTCCTTSEEEEECSSHHHHHHHHHHHHHHTCSCEEEET
T ss_pred EcCHHHhccCCCCCCCCHHHHHHHHHHcCCCCCCeEEEECCCchHHHHHHHHHHHcCCCCeEEEC
Confidence 455555533 2456777787889999999999999988888889999999974 33444
No 165
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=22.36 E-value=3.7e+02 Score=23.70 Aligned_cols=77 Identities=10% Similarity=-0.027 Sum_probs=46.7
Q ss_pred eeeHHHHHHHHHHH--HH-HH-HHcCCCCCCEEEEEcCCchhHHHHHHHHHHhCC-eEeecCCCCCHHHHHHHHHhcCce
Q 014952 52 VYTYADVELTSRKV--AA-GL-SKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGA-TSTTANPFYTPPEIAKQAIASKAK 126 (415)
Q Consensus 52 ~~Ty~el~~~~~~~--a~-~L-~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~-~~v~l~~~~~~~~~~~~l~~~~~~ 126 (415)
.+++.+.......+ |. .+ ...++++|++|+|...-.+-..++.+|-. .|+ .++.++.+ .+. ...+.+.+++
T Consensus 163 ~l~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~GaG~vG~~a~qla~~-~Ga~~Vi~~~~~--~~~-~~~~~~lGa~ 238 (374)
T 2jhf_A 163 ASPLEKVCLIGCGFSTGYGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKA-AGAARIIGVDIN--KDK-FAKAKEVGAT 238 (374)
T ss_dssp TCCHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHH-TTCSEEEEECSC--GGG-HHHHHHTTCS
T ss_pred CCCHHHhhhhccHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHH-cCCCeEEEEcCC--HHH-HHHHHHhCCc
Confidence 36666654332222 22 23 33589999999999976677777777664 687 55555532 233 3345677887
Q ss_pred EEEEcc
Q 014952 127 IIITQA 132 (415)
Q Consensus 127 ~vl~~~ 132 (415)
.++...
T Consensus 239 ~vi~~~ 244 (374)
T 2jhf_A 239 ECVNPQ 244 (374)
T ss_dssp EEECGG
T ss_pred eEeccc
Confidence 776543
No 166
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=22.13 E-value=4e+02 Score=23.46 Aligned_cols=77 Identities=14% Similarity=0.044 Sum_probs=46.7
Q ss_pred eeeHHHHHHHHHHH--HH-HH-HHcCCCCCCEEEEEcCCchhHHHHHHHHHHhCC-eEeecCCCCCHHHHHHHHHhcCce
Q 014952 52 VYTYADVELTSRKV--AA-GL-SKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGA-TSTTANPFYTPPEIAKQAIASKAK 126 (415)
Q Consensus 52 ~~Ty~el~~~~~~~--a~-~L-~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~-~~v~l~~~~~~~~~~~~l~~~~~~ 126 (415)
.+++.+.......+ |. .+ ...++++|++|+|...-.+-..++++|-. .|+ .++.++.+ .+. ..++.+.+++
T Consensus 164 ~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~GaG~vG~~a~qla~~-~Ga~~Vi~~~~~--~~~-~~~~~~lGa~ 239 (374)
T 1cdo_A 164 SAPLDTVCLLGCGVSTGFGAAVNTAKVEPGSTCAVFGLGAVGLAAVMGCHS-AGAKRIIAVDLN--PDK-FEKAKVFGAT 239 (374)
T ss_dssp TCCHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHH-TTCSEEEEECSC--GGG-HHHHHHTTCC
T ss_pred CCCHHHHhhhccHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHH-cCCCEEEEEcCC--HHH-HHHHHHhCCc
Confidence 36666654332222 22 23 34589999999999876677777777664 687 55555532 233 3345677887
Q ss_pred EEEEcc
Q 014952 127 IIITQA 132 (415)
Q Consensus 127 ~vl~~~ 132 (415)
.++...
T Consensus 240 ~vi~~~ 245 (374)
T 1cdo_A 240 DFVNPN 245 (374)
T ss_dssp EEECGG
T ss_pred eEEecc
Confidence 776543
No 167
>3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A*
Probab=21.97 E-value=91 Score=26.75 Aligned_cols=82 Identities=12% Similarity=0.047 Sum_probs=49.8
Q ss_pred HHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHHhCCeEeecCCCCCHHHHHHHHHhcCceEEEEcccchH--HH
Q 014952 61 TSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGATSTTANPFYTPPEIAKQAIASKAKIIITQAVYND--KV 138 (415)
Q Consensus 61 ~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~vl~~~~~~~--~~ 138 (415)
|...+|..|+ + |.+.+.+....++- +.|..+..++. ...+++...++..+++++|+|.-..+ ..
T Consensus 20 Rcl~LA~~l~-------~-v~F~~~~~~~~~~~-----~~g~~v~~l~~-~d~~~~~~~l~~~~~d~lIvD~Y~~~~~~~ 85 (282)
T 3hbm_A 20 RDLVLAKQYS-------D-VSFACLPLEGSLID-----EIPYPVYELSS-ESIYELINLIKEEKFELLIIDHYGISVDDE 85 (282)
T ss_dssp HHHHHHTTCS-------S-EEEEECCCTTCCGG-----GCCSCEEECSS-SCHHHHHHHHHHHTCSEEEEECTTCCHHHH
T ss_pred HHHHHHHHHH-------h-CEEEEecCcHhHHH-----HCCCeEEEcCc-cCHHHHHHHHHhCCCCEEEEECCCCCHHHH
Confidence 4445666655 3 55555443322221 34888777764 35677888898899999999865332 22
Q ss_pred HhhhhhcCceEEEeCCCC
Q 014952 139 RDLSEHHGARIVTIDPPP 156 (415)
Q Consensus 139 ~~~~~~~~~~~i~~~~~~ 156 (415)
..+......+++++|+..
T Consensus 86 ~~lk~~~~~~i~~iDD~~ 103 (282)
T 3hbm_A 86 KLIKLETGVKILSFDDEI 103 (282)
T ss_dssp HHHHHHHCCEEEEECSSC
T ss_pred HHHHHhcCcEEEEEecCC
Confidence 233232467888998764
No 168
>2d1f_A Threonine synthase; amino acid synthesis, pyridoxal-5'-phosphate, PLP, lyase; HET: PLP; 2.50A {Mycobacterium tuberculosis}
Probab=21.86 E-value=2.1e+02 Score=25.44 Aligned_cols=89 Identities=16% Similarity=0.060 Sum_probs=51.5
Q ss_pred CcEEEeCCCCCeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHHhCCeEeecCCCC-CHHHHHHH
Q 014952 41 RPCIINGPTGDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGATSTTANPFY-TPPEIAKQ 119 (415)
Q Consensus 41 ~~a~~~~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~-~~~~~~~~ 119 (415)
++.+-.++.+..-++++... ...+... .+.|. +.|.. ...+-.-..+.+++.+.|..++.+-|.. .+......
T Consensus 54 ~i~~K~E~~~ptgSfKdR~a-~~~l~~a-~~~g~---~~vv~-aSsGN~g~alA~~a~~~G~~~~i~~p~~~~~~~k~~~ 127 (360)
T 2d1f_A 54 TIHLKVEGLNPTGSFKDRGM-TMAVTDA-LAHGQ---RAVLC-ASTGNTSASAAAYAARAGITCAVLIPQGKIAMGKLAQ 127 (360)
T ss_dssp EEEEEEGGGSTTSBTTHHHH-HHHHHHH-HHTTC---SEEEE-CCSSHHHHHHHHHHHHHTCEEEEEECSSCCCHHHHHH
T ss_pred eEEEEECCCCCCcCHHHHHH-HHHHHHH-HHCCC---CEEEE-eCCcHHHHHHHHHHHHcCCcEEEEEcCCCCCHHHHHH
Confidence 45554443344555555322 1222222 23332 33333 3444444555688889999877776665 55666778
Q ss_pred HHhcCceEEEEcccch
Q 014952 120 AIASKAKIIITQAVYN 135 (415)
Q Consensus 120 l~~~~~~~vl~~~~~~ 135 (415)
++..++++++++....
T Consensus 128 ~~~~GA~v~~v~~~~~ 143 (360)
T 2d1f_A 128 AVMHGAKIIQIDGNFD 143 (360)
T ss_dssp HHHTTCEEEEBSSCHH
T ss_pred HHHcCCEEEEECCCHH
Confidence 8899999999886543
No 169
>4d9i_A Diaminopropionate ammonia-lyase; fold type II PLP-dependent enzyme, tryptophan synthase beta like PLP-dependent enzymes superfamily; HET: IT1; 2.00A {Escherichia coli} PDB: 4d9g_A* 4d9n_A* 4d9k_A* 4d9m_A*
Probab=21.69 E-value=4.4e+02 Score=23.64 Aligned_cols=60 Identities=15% Similarity=0.088 Sum_probs=43.5
Q ss_pred CCC-EEEEEcCCchhHHHHHHHHHHhCCeEeecCCCCCHHHHHHHHHhcCceEEEEcccchH
Q 014952 76 KGD-VIMLLLQNCPQFVFAFLGASYIGATSTTANPFYTPPEIAKQAIASKAKIIITQAVYND 136 (415)
Q Consensus 76 ~g~-~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~vl~~~~~~~ 136 (415)
+++ .|.. ...+-.-..+.+++.+.|..++.+-|...+......++..++++++++....+
T Consensus 110 ~~~~~vv~-aSsGNhg~a~A~aa~~~G~~~~iv~p~~~~~~k~~~~~~~GA~Vv~v~~~~~~ 170 (398)
T 4d9i_A 110 GEKMTFAT-TTDGNHGRGVAWAAQQLGQNAVIYMPKGSAQERVDAILNLGAECIVTDMNYDD 170 (398)
T ss_dssp SCCCEEEE-ECSSHHHHHHHHHHHHHTCEEEEEECTTCCHHHHHHHHTTTCEEEECSSCHHH
T ss_pred cCCCEEEE-ECCCHHHHHHHHHHHHcCCCEEEEEeCCCCHHHHHHHHHcCCEEEEECCCHHH
Confidence 344 4444 45555666777788888988877777767777788889999999999875443
No 170
>2ayi_A Aminopeptidase T; metallopeptidase, hydrolase; 3.70A {Thermus thermophilus} SCOP: e.60.1.1
Probab=21.63 E-value=1.8e+02 Score=26.50 Aligned_cols=51 Identities=20% Similarity=0.091 Sum_probs=36.9
Q ss_pred HHHHHHHHHHHHHH--cCCCCCCEEEEEcCCchh-H-HHHHHHHHHhCCeEeecC
Q 014952 58 VELTSRKVAAGLSK--LGVQKGDVIMLLLQNCPQ-F-VFAFLGASYIGATSTTAN 108 (415)
Q Consensus 58 l~~~~~~~a~~L~~--~g~~~g~~V~i~~~~~~~-~-~~~~lA~~~~G~~~v~l~ 108 (415)
+..+.+++|..+.+ .++++|+.|.|..+.... + -.+.-++.++|+.++.+.
T Consensus 4 ~~~~l~k~A~~~v~~~~~lq~Ge~vlI~~~~~~~~l~r~l~~~a~~~Ga~~v~v~ 58 (408)
T 2ayi_A 4 FKRNLEKLAELAIRVGLNLEKGQEVIATAPIEAVDFVRLLAEKAYREGASLFTVI 58 (408)
T ss_dssp CHHHHHHHHHHHHHTTTCCCTTCEEEEEECTTCHHHHHHHHHHHHHTTCSEEEEE
T ss_pred HHHHHHHHHHHHHHhCcCCCCCCEEEEEECCchHHHHHHHHHHHHHcCCceEEEE
Confidence 34577888888887 478999999999985432 2 234456778899887654
No 171
>4e5s_A MCCFLIKE protein (BA_5613); structural genomics, center for structural genomi infectious diseases, csgid, serine peptidase S66; 1.95A {Bacillus anthracis}
Probab=21.58 E-value=2.8e+02 Score=24.30 Aligned_cols=61 Identities=16% Similarity=0.151 Sum_probs=35.2
Q ss_pred CCCCCCEEEEEcCCchh------HHHHHHHH-HHhCCeEeecCCCC--------CH----HHHHHHHHhcCceEEEEccc
Q 014952 73 GVQKGDVIMLLLQNCPQ------FVFAFLGA-SYIGATSTTANPFY--------TP----PEIAKQAIASKAKIIITQAV 133 (415)
Q Consensus 73 g~~~g~~V~i~~~~~~~------~~~~~lA~-~~~G~~~v~l~~~~--------~~----~~~~~~l~~~~~~~vl~~~~ 133 (415)
-+++||+|+|+.|.+.- .+-..... -..|..++.-.... +. +++...+.+-+++.|++...
T Consensus 8 ~L~~GD~I~ivaPS~~~~~~~~~~~~~~~~~L~~~G~~v~~~~~~~~~~~~~ag~d~~Ra~dL~~a~~Dp~i~aI~~~rG 87 (331)
T 4e5s_A 8 KLKKGDEIRVISPSCSLSIVSTENRRLAVKRLTELGFHVTFSTHAEEIDRFASSSISSRVQDLHEAFRDPNVKAILTTLG 87 (331)
T ss_dssp CCCTTCEEEEECSSSCGGGSCHHHHHHHHHHHHHTTCEEEECTTTTCCCTTSSCCHHHHHHHHHHHHHCTTEEEEEESCC
T ss_pred CCCCcCEEEEEeCCCCccccCHHHHHHHHHHHHhCCCEEEECCchhcccCccCCCHHHHHHHHHHHhhCCCCCEEEEccc
Confidence 46889999999886531 22222222 23577666432111 11 45666666778889998653
No 172
>1xvl_A Mn transporter, MNTC protein; manganese, ABC-type transport systems, photosynthesis, cyanobacteria, disulfide bond, metal transport; 2.90A {Synechocystis SP} SCOP: c.92.2.2
Probab=21.35 E-value=1.6e+02 Score=25.75 Aligned_cols=72 Identities=15% Similarity=0.230 Sum_probs=44.2
Q ss_pred CCEEEEEcCCchhHHHHHHHHHHhCCeEeecCCC--CCHH---HHHHHHHhcCceEEEEcccchHH-HHhhhhhcCceEE
Q 014952 77 GDVIMLLLQNCPQFVFAFLGASYIGATSTTANPF--YTPP---EIAKQAIASKAKIIITQAVYNDK-VRDLSEHHGARIV 150 (415)
Q Consensus 77 g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~--~~~~---~~~~~l~~~~~~~vl~~~~~~~~-~~~~~~~~~~~~i 150 (415)
..+..+..++...++.-.+++-..|. ..+++. -++. ++...+++.++++||++.....+ .+.+.+..+.+++
T Consensus 203 ~~r~~v~~H~af~Yfa~~yGL~~~~~--~~~~~~~eps~~~l~~l~~~ik~~~v~~If~e~~~~~~~~~~iA~e~g~~v~ 280 (321)
T 1xvl_A 203 NQRFLVSCEGAFSYLARDYGMEEIYM--WPINAEQQFTPKQVQTVIEEVKTNNVPTIFCESTVSDKGQKQVAQATGARFG 280 (321)
T ss_dssp GGCEEEEEESTTHHHHHHTTCEEEEE--ESSSSSCSCCHHHHHHHHHHHHTTTCSEEEEETTSCSHHHHHHHTTTCCEEE
T ss_pred cCCEEEEECchHHHHHHHCCCeEEEe--eccCCCCCCCHHHHHHHHHHHHHcCCcEEEEeCCCChHHHHHHHHhcCCcee
Confidence 34566777888888888887776542 234333 2344 45555667789999998765543 3444444555543
No 173
>3d1p_A Putative thiosulfate sulfurtransferase YOR285W; atomic structure, atomic resolution structure, PSI, MCSG; HET: MSE; 0.98A {Saccharomyces cerevisiae}
Probab=21.19 E-value=1.4e+02 Score=21.89 Aligned_cols=52 Identities=10% Similarity=-0.104 Sum_probs=36.3
Q ss_pred eeeHHHHHHHH----HHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHHhCCe
Q 014952 52 VYTYADVELTS----RKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGAT 103 (415)
Q Consensus 52 ~~Ty~el~~~~----~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~ 103 (415)
.+.+.++.... ..+...+...++.+++.|.++|..+.....+...+...|..
T Consensus 62 nip~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ivvyC~~G~rs~~aa~~L~~~G~~ 117 (139)
T 3d1p_A 62 NVPYRSHPDAFALDPLEFEKQIGIPKPDSAKELIFYCASGKRGGEAQKVASSHGYS 117 (139)
T ss_dssp ECCTTTCTTGGGSCHHHHHHHHSSCCCCTTSEEEEECSSSHHHHHHHHHHHTTTCC
T ss_pred EcCHHHhhhhccCCHHHHHHHHhccCCCCCCeEEEECCCCchHHHHHHHHHHcCCC
Confidence 34555553322 23444454457778889999999998888888888888875
No 174
>2zsj_A Threonine synthase; PLP dependent enzyme, lyase; HET: PLP; 1.80A {Aquifex aeolicus}
Probab=20.95 E-value=1.8e+02 Score=25.70 Aligned_cols=88 Identities=13% Similarity=0.061 Sum_probs=51.2
Q ss_pred cEEEeCCCCCeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHHhCCeEeecCCCC-CHHHHHHHH
Q 014952 42 PCIINGPTGDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGATSTTANPFY-TPPEIAKQA 120 (415)
Q Consensus 42 ~a~~~~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~-~~~~~~~~l 120 (415)
+.+-.++.+..-++++-.. ...+... .+.|. +.|.. ...+-.-..+.+++.+.|..++.+-|.. .+......+
T Consensus 49 i~~K~E~~~ptGS~KdR~a-~~~l~~a-~~~g~---~~vv~-~SsGN~g~alA~~a~~~G~~~~i~~p~~~~~~~k~~~~ 122 (352)
T 2zsj_A 49 IYLKYEGLNPTGSFKDRGM-TLAISKA-VEAGK---RAVIC-ASTGNTSASAAAYAARAGLRAYVLLPKGAVAIGKLSQA 122 (352)
T ss_dssp EEEEEGGGSTTSBTTHHHH-HHHHHHH-HHTTC---CEEEE-CCSSHHHHHHHHHHHHHTCEEEEEEEGGGCCHHHHHHH
T ss_pred EEEEECCCCCCccHHHHHH-HHHHHHH-HhcCC---CEEEE-eCCchHHHHHHHHHHhcCCcEEEEECCCCCCHHHHHHH
Confidence 5565543344455555322 1222222 23342 33333 3444445556688889998877766654 555666788
Q ss_pred HhcCceEEEEcccch
Q 014952 121 IASKAKIIITQAVYN 135 (415)
Q Consensus 121 ~~~~~~~vl~~~~~~ 135 (415)
+..++++++++....
T Consensus 123 ~~~GA~v~~v~~~~~ 137 (352)
T 2zsj_A 123 MIYGAKVLAIQGTFD 137 (352)
T ss_dssp HHTTCEEEEESSCHH
T ss_pred HHcCCEEEEECCCHH
Confidence 899999999987543
No 175
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=20.89 E-value=3.1e+02 Score=24.10 Aligned_cols=54 Identities=19% Similarity=0.313 Sum_probs=35.8
Q ss_pred eeHHHHHHHHHHHH---HHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHHhCCe-EeecC
Q 014952 53 YTYADVELTSRKVA---AGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGAT-STTAN 108 (415)
Q Consensus 53 ~Ty~el~~~~~~~a---~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~-~v~l~ 108 (415)
+++.+.... ..++ +.|...++++|++|+|...-.+-.+++++|- ..|+. ++.++
T Consensus 154 ~s~~~aa~~-~~~~ta~~~l~~~~~~~g~~VlV~GaG~vG~~aiqlak-~~Ga~~Vi~~~ 211 (363)
T 3m6i_A 154 MSYENGAML-EPLSVALAGLQRAGVRLGDPVLICGAGPIGLITMLCAK-AAGACPLVITD 211 (363)
T ss_dssp CCHHHHHHH-HHHHHHHHHHHHHTCCTTCCEEEECCSHHHHHHHHHHH-HTTCCSEEEEE
T ss_pred CCHHHHHhh-hHHHHHHHHHHHcCCCCCCEEEEECCCHHHHHHHHHHH-HcCCCEEEEEC
Confidence 666665432 1222 3355568999999999988777777777775 47875 55454
No 176
>3hzu_A Thiosulfate sulfurtransferase SSEA; niaid, ssgcid, infectious disease, transferase structural genomics; 2.10A {Mycobacterium tuberculosis} PDB: 3p3a_A
Probab=20.68 E-value=1.8e+02 Score=25.31 Aligned_cols=41 Identities=12% Similarity=0.263 Sum_probs=32.1
Q ss_pred HHHHHHHHHcCCCCCCEEEEEcCCch-hHHHHHHHHHHhCCe
Q 014952 63 RKVAAGLSKLGVQKGDVIMLLLQNCP-QFVFAFLGASYIGAT 103 (415)
Q Consensus 63 ~~~a~~L~~~g~~~g~~V~i~~~~~~-~~~~~~lA~~~~G~~ 103 (415)
..++..+.++|+.+++.|.++|..+. ....+.+.+...|..
T Consensus 97 ~~~~~~l~~lgi~~~~~vVvyc~~g~~~a~~a~~~L~~~G~~ 138 (318)
T 3hzu_A 97 EQFAELMDRKGIARDDTVVIYGDKSNWWAAYALWVFTLFGHA 138 (318)
T ss_dssp HHHHHHHHHTTCCTTCEEEEECSGGGHHHHHHHHHHHHTTCS
T ss_pred HHHHHHHHHcCCCCCCeEEEECCCCCccHHHHHHHHHHcCCC
Confidence 57788888899999999999998765 555666666777774
No 177
>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8
Probab=20.68 E-value=2.4e+02 Score=20.87 Aligned_cols=92 Identities=13% Similarity=-0.017 Sum_probs=48.0
Q ss_pred CCHHhHHHhhhccCCCCcEEEeCCCCCeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHHhCCeE
Q 014952 25 LPLHTYCFENISQFADRPCIINGPTGDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGATS 104 (415)
Q Consensus 25 ~tl~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~ 104 (415)
..++..+.++..+.+.++.-++.. ..++ .+ .+....+.++ ..+-|.|.++.+ .....-++..|..+|...
T Consensus 27 g~~G~~~~~~L~~~G~~V~~vnp~-~~~i-~G------~~~~~s~~el-~~~vDlvii~vp-~~~v~~v~~~~~~~g~~~ 96 (138)
T 1y81_A 27 AKYGNIILKDLLSKGFEVLPVNPN-YDEI-EG------LKCYRSVREL-PKDVDVIVFVVP-PKVGLQVAKEAVEAGFKK 96 (138)
T ss_dssp TSHHHHHHHHHHHTTCEEEEECTT-CSEE-TT------EECBSSGGGS-CTTCCEEEECSC-HHHHHHHHHHHHHTTCCE
T ss_pred CCHHHHHHHHHHHCCCEEEEeCCC-CCeE-CC------eeecCCHHHh-CCCCCEEEEEeC-HHHHHHHHHHHHHcCCCE
Confidence 456666666666666554444442 2222 00 0000112222 113466666666 455555555677777766
Q ss_pred eecCCCCCHHHHHHHHHhcCce
Q 014952 105 TTANPFYTPPEIAKQAIASKAK 126 (415)
Q Consensus 105 v~l~~~~~~~~~~~~l~~~~~~ 126 (415)
+.+.+....+++....++.+..
T Consensus 97 i~~~~~~~~~~l~~~a~~~Gi~ 118 (138)
T 1y81_A 97 LWFQPGAESEEIRRFLEKAGVE 118 (138)
T ss_dssp EEECTTSCCHHHHHHHHHHTCE
T ss_pred EEEcCccHHHHHHHHHHHCCCE
Confidence 6666655556666666666655
No 178
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=20.59 E-value=3.9e+02 Score=23.25 Aligned_cols=59 Identities=12% Similarity=0.052 Sum_probs=39.3
Q ss_pred HHHHcCCCCCCEEEEEcCCchhHHHHHHHHHHhCC-eEeecCCCCCHHHHHHHHHhcCceEEEEc
Q 014952 68 GLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGA-TSTTANPFYTPPEIAKQAIASKAKIIITQ 131 (415)
Q Consensus 68 ~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~-~~v~l~~~~~~~~~~~~l~~~~~~~vl~~ 131 (415)
.|.+.++ +|++|+|...-.+-..++.+|-. .|+ .++.++.+ .+ ....+.+.+++.++..
T Consensus 160 ~l~~~~~-~g~~VlV~GaG~vG~~~~q~a~~-~Ga~~Vi~~~~~--~~-~~~~~~~~Ga~~~~~~ 219 (348)
T 2d8a_A 160 TVLAGPI-SGKSVLITGAGPLGLLGIAVAKA-SGAYPVIVSEPS--DF-RRELAKKVGADYVINP 219 (348)
T ss_dssp HHTTSCC-TTCCEEEECCSHHHHHHHHHHHH-TTCCSEEEECSC--HH-HHHHHHHHTCSEEECT
T ss_pred HHHhcCC-CCCEEEEECCCHHHHHHHHHHHH-cCCCEEEEECCC--HH-HHHHHHHhCCCEEECC
Confidence 3445688 99999999996677777777664 687 55555542 33 3445567777766643
No 179
>3ss7_X D-serine dehydratase; type II fold, ALFA,beta-elimination, P 5'-phosphate, lyase; HET: PLP; 1.55A {Escherichia coli} PDB: 3ss9_X* 3r0x_A* 3r0z_A
Probab=20.51 E-value=4.9e+02 Score=23.78 Aligned_cols=59 Identities=8% Similarity=-0.099 Sum_probs=43.1
Q ss_pred EEEEcCCchhHHHHHHHHHHhCCeEeecCCCCCHHHHHHHHHhcCceEEEEcccchHHH
Q 014952 80 IMLLLQNCPQFVFAFLGASYIGATSTTANPFYTPPEIAKQAIASKAKIIITQAVYNDKV 138 (415)
Q Consensus 80 V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~vl~~~~~~~~~ 138 (415)
..+....+-.-..+.+++.++|..++.+-|...+......++..++++++++....+..
T Consensus 162 ~vv~aSsGNhg~avA~~aa~~G~~~~Ivmp~~~~~~k~~~~r~~GA~Vv~v~~~~~~a~ 220 (442)
T 3ss7_X 162 SIAVGSTGNLGLSIGIMSARIGFKVTVHMSADARAWKKAKLRSHGVTVVEYEQDYGVAV 220 (442)
T ss_dssp EEEEECSSHHHHHHHHHHHHHTCEEEEEEETTSCHHHHHHHHHTTCEEEEESSCHHHHH
T ss_pred EEEEECCCHHHHHHHHHHHHhCCcEEEEECCCCCHHHHHHHHHCCCEEEEECCCHHHHH
Confidence 44455555566677778888998877776666667778888999999999987654433
No 180
>1mdo_A ARNB aminotransferase; type 1 aminotransferase fold; HET: MSE PMP; 1.70A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1mdx_A* 1mdz_A*
Probab=20.41 E-value=2.6e+02 Score=24.55 Aligned_cols=56 Identities=21% Similarity=0.252 Sum_probs=29.7
Q ss_pred cCCCCCCEEEEEcCCchhHHHHHHHHHHhCCeEeecCCC-----CCHHHHHHHHHhcCceEEEEc
Q 014952 72 LGVQKGDVIMLLLQNCPQFVFAFLGASYIGATSTTANPF-----YTPPEIAKQAIASKAKIIITQ 131 (415)
Q Consensus 72 ~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~-----~~~~~~~~~l~~~~~~~vl~~ 131 (415)
.++++||.|.+..+..... .-++...|+.++.++.+ .+.+.+...+.. ++++|+..
T Consensus 74 ~~~~~gd~Vl~~~~~~~~~---~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~-~~~~v~~~ 134 (393)
T 1mdo_A 74 LGIGEGDEVITPSMTWVST---LNMIVLLGANPVMVDVDRDTLMVTPEHIEAAITP-QTKAIIPV 134 (393)
T ss_dssp TTCCTTCEEEEESSSCHHH---HHHHHHTTCEEEEECBCTTTCCBCHHHHHHHCCT-TEEEECCB
T ss_pred cCCCCCCEEEeCCCccHhH---HHHHHHCCCEEEEEeccCCcCCCCHHHHHHhcCC-CceEEEEe
Confidence 3466777776665544332 23445567666554422 345666665543 45555543
No 181
>3utn_X Thiosulfate sulfurtransferase TUM1; rhodanese-like domain; 1.90A {Saccharomyces cerevisiae}
Probab=20.33 E-value=1.9e+02 Score=25.36 Aligned_cols=44 Identities=18% Similarity=0.197 Sum_probs=32.9
Q ss_pred HHHHHHHHHHcCCCCCCEEEEEcCCc-hhHHHHHHHHHHhCCeEe
Q 014952 62 SRKVAAGLSKLGVQKGDVIMLLLQNC-PQFVFAFLGASYIGATST 105 (415)
Q Consensus 62 ~~~~a~~L~~~g~~~g~~V~i~~~~~-~~~~~~~lA~~~~G~~~v 105 (415)
.++++..|.++|+.+++.|.++.... ....-+.+-+...|.--|
T Consensus 98 ~~~f~~~l~~lGI~~d~~VVvYD~~~~~~AaR~wW~Lr~~Gh~~V 142 (327)
T 3utn_X 98 KKVFDDAMSNLGVQKDDILVVYDRVGNFSSPRCAWTLGVMGHPKV 142 (327)
T ss_dssp HHHHHHHHHHTTCCTTCEEEEECSSSSSSHHHHHHHHHHTTCSEE
T ss_pred HHHHHHHHHHcCCCCCCEEEEEeCCCCcHHHHHHHHHHHcCCCce
Confidence 57899999999999999999997754 334445566667775444
No 182
>3mfq_A TROA, high-affinity zinc uptake system protein ZNUA; metal binding protein; 2.60A {Streptococcus suis} SCOP: c.92.2.0
Probab=20.06 E-value=1.4e+02 Score=25.60 Aligned_cols=80 Identities=13% Similarity=0.083 Sum_probs=48.6
Q ss_pred HHHHHHHHHHHHHHHHc--CCCCCCEEEEEcCCchhHHHHHHHHHHhCCeEeecCCC--CCHH---HHHHHHHhcCceEE
Q 014952 56 ADVELTSRKVAAGLSKL--GVQKGDVIMLLLQNCPQFVFAFLGASYIGATSTTANPF--YTPP---EIAKQAIASKAKII 128 (415)
Q Consensus 56 ~el~~~~~~~a~~L~~~--g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~--~~~~---~~~~~l~~~~~~~v 128 (415)
.++.++.+.+-..+++. .+.++.+..+..++...++.-.+++-..|..- +++. -++. ++...+++.++++|
T Consensus 139 ~~~~~~L~~ld~~~~~~l~~~~~~~~~~vt~H~af~Y~~~~yGl~~~~~~~--~~~~~eps~~~l~~l~~~ik~~~v~~i 216 (282)
T 3mfq_A 139 EKYQAQLDDLHAWVEKELSVIPKESRYLVTPHDAFNYFAASYDFTLYAPQG--VSTDSEVANSDMIETVNLIIDHNIKAI 216 (282)
T ss_dssp HHHHHHHHHHHHHHHHHHTTSCGGGCEEECSSSCCHHHHHHTTCEEECSSC--SSSCSCCCHHHHHHHHHHHHHHTCCEE
T ss_pred HHHHHHHHHHHHHHHHHHhcCCccCcEEEEECchHHHHHHHCCCeEecccc--cCCCCCCCHHHHHHHHHHHHHcCCCEE
Confidence 44444444555555442 34445677888888888888777776665322 2222 2344 45556667899999
Q ss_pred EEcccchHH
Q 014952 129 ITQAVYNDK 137 (415)
Q Consensus 129 l~~~~~~~~ 137 (415)
|++.....+
T Consensus 217 f~e~~~~~~ 225 (282)
T 3mfq_A 217 FTESTTNPE 225 (282)
T ss_dssp ECBTTSCTH
T ss_pred EEeCCCChH
Confidence 998765443
No 183
>3frk_A QDTB; aminotransferase, sugar-modification, natural porduct; HET: TQP; 2.15A {Thermoanaerobacteriumthermosaccharolyticum}
Probab=20.02 E-value=2.8e+02 Score=24.21 Aligned_cols=58 Identities=26% Similarity=0.312 Sum_probs=31.5
Q ss_pred HHHcCCCCCCEEEEEcCCchhHHHHHHHHHHhCCeEeecCCC-----CCHHHHHHHHHhcCceEEEE
Q 014952 69 LSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGATSTTANPF-----YTPPEIAKQAIASKAKIIIT 130 (415)
Q Consensus 69 L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~-----~~~~~~~~~l~~~~~~~vl~ 130 (415)
++..++++||.|.+..+..... ..++...|+.++.++.+ .+.+.+...+.. +.++|+.
T Consensus 68 l~~l~~~~gd~Vi~~~~~~~~~---~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~l~~-~~~~v~~ 130 (373)
T 3frk_A 68 LKGYDIGFGDEVIVPSNTFIAT---ALAVSYTGAKPIFVEPDIRTYNIDPSLIESAITE-KTKAIIA 130 (373)
T ss_dssp HHHTTCCTTCEEEEETTSCTHH---HHHHHHHSCEEEEECEETTTTEECGGGTGGGCCT-TEEEEEE
T ss_pred HHHcCCCCcCEEEECCCCcHHH---HHHHHHcCCEEEEEeccccccCcCHHHHHHhcCC-CCeEEEE
Confidence 4444677888777766644443 33456667776655432 134555544433 4555554
Done!