Query 014953
Match_columns 415
No_of_seqs 235 out of 2888
Neff 9.4
Searched_HMMs 29240
Date Mon Mar 25 04:04:55 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014953.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/014953hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1yp2_A Glucose-1-phosphate ade 100.0 7.1E-55 2.4E-59 433.7 34.4 394 4-404 16-413 (451)
2 3brk_X Glucose-1-phosphate ade 100.0 1.3E-52 4.6E-57 413.4 37.2 363 6-408 10-392 (420)
3 3st8_A Bifunctional protein GL 100.0 9.9E-44 3.4E-48 357.4 27.6 365 6-414 10-453 (501)
4 2ggo_A 401AA long hypothetical 100.0 3.1E-43 1.1E-47 344.8 24.4 343 9-414 1-398 (401)
5 1hm9_A GLMU, UDP-N-acetylgluco 100.0 9.3E-43 3.2E-47 348.2 27.0 354 9-414 12-444 (468)
6 4fce_A Bifunctional protein GL 100.0 1.8E-41 6E-46 338.1 23.5 353 7-414 7-439 (459)
7 2v0h_A Bifunctional protein GL 100.0 1.4E-40 4.7E-45 331.4 24.5 307 6-364 3-327 (456)
8 3juk_A UDP-glucose pyrophospho 100.0 4.3E-37 1.5E-41 286.6 20.2 244 8-289 2-271 (281)
9 4ecm_A Glucose-1-phosphate thy 100.0 5.1E-35 1.8E-39 270.6 25.0 237 6-290 22-261 (269)
10 1tzf_A Glucose-1-phosphate cyt 100.0 8.7E-34 3E-38 261.1 22.3 246 8-290 2-252 (259)
11 2e3d_A UTP--glucose-1-phosphat 100.0 9.2E-34 3.1E-38 266.8 21.9 243 7-289 7-282 (302)
12 2ux8_A Glucose-1-phosphate uri 100.0 1.1E-33 3.8E-38 265.6 19.5 248 5-290 11-281 (297)
13 3pnn_A Conserved domain protei 100.0 2.3E-33 7.8E-38 263.6 16.9 256 5-288 2-291 (303)
14 2pa4_A UTP-glucose-1-phosphate 100.0 9.3E-33 3.2E-37 262.0 20.3 248 7-290 11-284 (323)
15 1fxo_A Glucose-1-phosphate thy 100.0 5.1E-32 1.7E-36 253.0 24.4 233 8-287 2-240 (293)
16 4evw_A Nucleoside-diphosphate- 100.0 1.2E-32 4E-37 252.2 18.7 228 11-286 2-245 (255)
17 1lvw_A Glucose-1-phosphate thy 100.0 1.1E-31 3.6E-36 250.8 24.0 233 8-287 3-241 (295)
18 1mc3_A Glucose-1-phosphate thy 100.0 5.6E-32 1.9E-36 252.7 20.1 233 8-287 3-241 (296)
19 2qh5_A PMI, ALGA, mannose-6-ph 100.0 6.3E-31 2.2E-35 247.7 16.7 241 7-286 3-282 (308)
20 1jyk_A LICC protein, CTP:phosp 100.0 3.8E-29 1.3E-33 229.1 15.4 222 7-288 24-252 (254)
21 2x65_A Mannose-1-phosphate gua 100.0 4.9E-29 1.7E-33 236.9 13.1 233 9-282 2-270 (336)
22 3oam_A 3-deoxy-manno-octuloson 100.0 3.5E-27 1.2E-31 215.7 19.1 239 8-289 2-250 (252)
23 2cu2_A Putative mannose-1-phos 99.9 4.2E-28 1.4E-32 230.5 10.6 233 8-284 2-267 (337)
24 3tqd_A 3-deoxy-manno-octuloson 99.9 9.3E-25 3.2E-29 199.1 19.1 236 7-285 8-255 (256)
25 3k8d_A 3-deoxy-manno-octuloson 99.9 1.4E-24 4.8E-29 198.8 17.6 236 7-286 17-263 (264)
26 2y6p_A 3-deoxy-manno-octuloson 99.9 1.4E-23 4.8E-28 189.8 19.2 224 8-286 2-231 (234)
27 2xme_A CTP-inositol-1-phosphat 99.9 3.9E-24 1.3E-28 193.2 13.1 214 6-285 16-231 (232)
28 1h7e_A 3-deoxy-manno-octuloson 99.9 7.4E-23 2.5E-27 186.4 18.5 228 8-287 2-238 (245)
29 4fcu_A 3-deoxy-manno-octuloson 99.9 3E-22 1E-26 182.3 19.9 237 9-289 2-251 (253)
30 1vic_A 3-deoxy-manno-octuloson 99.9 5E-22 1.7E-26 182.7 19.7 244 8-289 2-254 (262)
31 2icy_A Probable UTP-glucose-1- 99.8 2.5E-20 8.7E-25 182.2 19.1 339 7-399 78-469 (469)
32 3f1c_A Putative 2-C-methyl-D-e 99.8 8E-21 2.7E-25 172.9 14.3 229 6-289 1-235 (246)
33 2vsh_A TARI, 2-C-methyl-D-eryt 99.8 8.9E-21 3E-25 171.5 14.4 224 9-287 3-234 (236)
34 1vgw_A 4-diphosphocytidyl-2C-m 99.8 4.9E-20 1.7E-24 166.1 18.5 220 7-286 5-228 (231)
35 2xwl_A 2-C-methyl-D-erythritol 99.8 2.2E-20 7.6E-25 167.4 15.5 214 8-288 2-220 (223)
36 2yc3_A 2-C-methyl-D-erythritol 99.8 2.1E-20 7.2E-25 168.2 13.9 219 7-287 3-225 (228)
37 1ezi_A CMP-N-acetylneuraminic 99.8 3E-20 1E-24 167.2 14.9 217 7-287 3-224 (228)
38 2dpw_A Hypothetical protein TT 99.8 9.7E-21 3.3E-25 170.8 4.1 200 8-280 2-231 (232)
39 2i5k_A UTP--glucose-1-phosphat 99.8 2.5E-18 8.5E-23 169.1 20.4 339 6-399 90-485 (488)
40 1qwj_A Cytidine monophospho-N- 99.8 6.5E-19 2.2E-23 158.5 14.6 217 7-288 2-222 (229)
41 1i52_A 4-diphosphocytidyl-2-C- 99.8 2.3E-18 7.9E-23 155.6 16.3 219 6-289 5-230 (236)
42 3rsb_A Adenosylcobinamide-phos 99.8 1.6E-18 5.4E-23 152.1 11.6 130 9-167 1-137 (196)
43 2wee_A MOBA-related protein; u 99.7 4E-18 1.4E-22 149.6 10.6 121 7-159 4-126 (197)
44 2waw_A MOBA relate protein; un 99.7 1.7E-17 5.7E-22 145.8 13.4 187 7-286 4-195 (199)
45 2px7_A 2-C-methyl-D-erythritol 99.7 8.5E-18 2.9E-22 151.9 11.3 206 8-288 25-233 (236)
46 3q80_A 2-C-methyl-D-erythritol 99.7 1.6E-16 5.4E-21 142.4 19.1 218 7-286 6-229 (231)
47 1vpa_A 2-C-methyl-D-erythritol 99.7 1.7E-16 5.9E-21 143.0 17.2 212 7-287 12-228 (234)
48 2iu8_A LPXD, UDP-3-O-[3-hydrox 99.7 1.3E-17 4.6E-22 160.7 3.1 103 130-272 11-117 (374)
49 2e8b_A Probable molybdopterin- 99.7 6.9E-17 2.4E-21 142.2 6.3 179 6-285 12-197 (201)
50 1jv1_A Glcnac1P uridyltransfer 99.7 7E-16 2.4E-20 152.3 13.7 212 7-239 101-344 (505)
51 2oeg_A UTP-glucose-1-phosphate 99.6 4.2E-15 1.4E-19 145.9 17.1 346 7-397 74-490 (505)
52 3d5n_A Q97W15_sulso; NESG, SSR 99.6 3.1E-16 1.1E-20 137.5 7.8 115 8-159 2-118 (197)
53 1e5k_A Molybdopterin-guanine d 99.6 1.7E-15 5.7E-20 133.3 11.8 111 6-151 4-116 (201)
54 3r8y_A 2,3,4,5-tetrahydropyrid 99.6 2E-15 6.7E-20 136.6 5.0 137 256-414 36-207 (240)
55 3ngw_A Molybdopterin-guanine d 99.5 7.2E-14 2.4E-18 123.2 14.4 115 9-161 1-117 (208)
56 1w55_A ISPD/ISPF bifunctional 99.5 7.6E-15 2.6E-19 140.1 8.0 196 7-283 2-202 (371)
57 2yqc_A UDP-N-acetylglucosamine 99.5 1.6E-13 5.6E-18 135.0 12.7 213 7-239 102-352 (486)
58 3c8v_A Putative acetyltransfer 99.5 3E-14 1E-18 140.1 5.8 238 107-414 123-392 (496)
59 3oc9_A UDP-N-acetylglucosamine 99.5 6.6E-13 2.3E-17 126.4 14.7 210 7-237 34-275 (405)
60 3bfp_A Acetyltransferase; LEFT 99.3 2.7E-11 9.3E-16 105.5 12.3 127 269-414 50-185 (194)
61 3mqg_A Lipopolysaccharides bio 99.2 1E-11 3.5E-16 108.1 7.6 117 295-414 5-144 (192)
62 2pig_A Putative transferase; S 99.2 5E-12 1.7E-16 118.6 5.3 138 270-407 26-196 (334)
63 1xhd_A Putative acetyltransfer 99.2 2.7E-11 9.4E-16 103.5 9.1 73 322-413 52-133 (173)
64 4ea9_A Perosamine N-acetyltran 99.2 5.4E-11 1.8E-15 105.9 10.9 125 271-414 76-207 (220)
65 3ixc_A Hexapeptide transferase 99.2 3.6E-11 1.2E-15 104.5 8.6 91 321-414 51-156 (191)
66 3r3r_A Ferripyochelin binding 99.2 4.8E-11 1.7E-15 103.3 9.2 73 323-414 56-144 (187)
67 1v3w_A Ferripyochelin binding 99.2 5.4E-11 1.8E-15 101.7 9.3 92 296-406 19-122 (173)
68 3eh0_A UDP-3-O-[3-hydroxymyris 99.2 7.8E-11 2.7E-15 111.8 11.1 97 271-367 74-176 (341)
69 4e79_A UDP-3-O-acylglucosamine 99.2 9.1E-11 3.1E-15 111.9 11.0 101 269-369 78-183 (357)
70 3kwd_A Carbon dioxide concentr 99.1 1.3E-10 4.6E-15 102.7 10.2 109 295-406 47-179 (213)
71 3r1w_A Carbonic anhydrase; bet 99.1 1.3E-10 4.4E-15 100.8 9.0 56 339-413 89-147 (189)
72 3tv0_A Dynactin subunit 6; LEF 99.1 7.8E-11 2.7E-15 102.7 7.4 27 380-406 109-136 (194)
73 3vbi_A ANTD, galactoside O-ace 99.1 1.4E-10 4.7E-15 102.0 9.1 90 322-414 53-176 (205)
74 3pmo_A UDP-3-O-[3-hydroxymyris 99.1 3.2E-10 1.1E-14 108.6 11.3 45 270-314 95-140 (372)
75 1j2z_A Acyl-[acyl-carrier-prot 99.1 1.6E-10 5.5E-15 105.9 8.4 35 380-414 147-182 (270)
76 4eqy_A Acyl-[acyl-carrier-prot 99.0 3.1E-10 1.1E-14 104.9 8.3 35 380-414 168-203 (283)
77 3hsq_A Acyl-[acyl-carrier-prot 99.0 2.5E-10 8.7E-15 104.1 7.7 91 321-414 48-181 (259)
78 3r0s_A Acyl-[acyl-carrier-prot 99.0 3.2E-10 1.1E-14 103.8 8.3 91 321-414 52-186 (266)
79 3t57_A UDP-N-acetylglucosamine 99.0 3.9E-10 1.3E-14 105.3 8.6 58 295-352 9-70 (305)
80 2ggo_A 401AA long hypothetical 99.0 2.4E-10 8.2E-15 111.1 6.4 85 302-389 235-330 (401)
81 1qre_A Carbonic anhydrase; bet 99.0 1.1E-09 3.8E-14 99.0 10.3 65 338-405 141-207 (247)
82 4eqy_A Acyl-[acyl-carrier-prot 99.0 4.2E-10 1.4E-14 104.0 7.2 82 321-405 70-176 (283)
83 3jqy_B NEUO, polysialic acid O 99.0 6.2E-10 2.1E-14 101.0 8.0 75 321-414 105-205 (252)
84 4e6u_A Acyl-[acyl-carrier-prot 99.0 6.1E-10 2.1E-14 101.9 7.8 57 355-414 129-188 (265)
85 3fs8_A QDTC; acetyltransferase 99.0 7.5E-10 2.6E-14 101.8 8.2 74 296-369 11-103 (273)
86 3tv0_A Dynactin subunit 6; LEF 99.0 8.6E-10 2.9E-14 96.0 8.0 77 322-405 52-147 (194)
87 4e6u_A Acyl-[acyl-carrier-prot 99.0 8.2E-10 2.8E-14 101.1 8.2 57 296-352 10-70 (265)
88 2qia_A UDP-N-acetylglucosamine 99.0 1.1E-09 3.7E-14 100.1 8.5 35 380-414 151-186 (262)
89 3ixc_A Hexapeptide transferase 99.0 2.2E-09 7.4E-14 93.2 9.9 103 296-405 42-157 (191)
90 3eg4_A 2,3,4,5-tetrahydropyrid 99.0 1.2E-09 4E-14 101.4 8.6 73 297-369 133-217 (304)
91 3gos_A 2,3,4,5-tetrahydropyrid 99.0 1.4E-09 4.6E-14 99.8 8.6 68 298-366 109-189 (276)
92 1xhd_A Putative acetyltransfer 98.9 3.4E-09 1.2E-13 90.4 10.3 90 307-404 14-116 (173)
93 3tk8_A 2,3,4,5-tetrahydropyrid 98.9 1.4E-09 4.9E-14 101.1 8.3 68 299-366 151-230 (316)
94 3fs8_A QDTC; acetyltransferase 98.9 1.4E-09 4.7E-14 100.0 7.4 35 380-414 177-212 (273)
95 2wlg_A Polysialic acid O-acety 98.9 2.5E-09 8.7E-14 94.6 8.7 88 322-414 80-179 (215)
96 3r3r_A Ferripyochelin binding 98.9 5.7E-09 2E-13 90.2 10.0 92 300-403 16-125 (187)
97 3r8y_A 2,3,4,5-tetrahydropyrid 98.9 2.8E-09 9.6E-14 96.0 8.1 84 321-404 103-191 (240)
98 2qia_A UDP-N-acetylglucosamine 98.9 2.3E-09 7.7E-14 98.0 7.3 54 316-369 47-123 (262)
99 3eh0_A UDP-3-O-[3-hydroxymyris 98.9 2.7E-09 9.4E-14 101.1 8.1 16 337-352 200-215 (341)
100 3pmo_A UDP-3-O-[3-hydroxymyris 98.9 3.3E-09 1.1E-13 101.5 8.6 20 390-409 298-317 (372)
101 3r5d_A Tetrahydrodipicolinate 98.9 1.6E-09 5.5E-14 99.3 6.0 70 296-366 187-268 (347)
102 1v3w_A Ferripyochelin binding 98.9 9E-09 3.1E-13 87.8 10.4 91 301-403 12-113 (173)
103 3srt_A Maltose O-acetyltransfe 98.9 6.9E-09 2.3E-13 89.7 9.1 89 305-414 62-174 (188)
104 3q1x_A Serine acetyltransferas 98.9 3.2E-09 1.1E-13 98.3 7.4 74 338-414 190-265 (313)
105 3nz2_A Hexapeptide-repeat cont 98.9 8.2E-09 2.8E-13 89.7 9.6 91 321-414 76-174 (195)
106 3mqg_A Lipopolysaccharides bio 98.9 4.8E-09 1.7E-13 91.0 8.0 24 380-403 103-127 (192)
107 3c8v_A Putative acetyltransfer 98.9 5E-09 1.7E-13 103.0 9.0 81 306-405 274-357 (496)
108 3vbi_A ANTD, galactoside O-ace 98.9 4.7E-09 1.6E-13 92.2 7.9 96 295-403 40-171 (205)
109 4e79_A UDP-3-O-acylglucosamine 98.8 3.6E-09 1.2E-13 100.8 7.6 15 338-352 206-220 (357)
110 3hjj_A Maltose O-acetyltransfe 98.8 9.3E-09 3.2E-13 89.0 9.4 104 305-414 64-176 (190)
111 3kwd_A Carbon dioxide concentr 98.8 1.1E-08 3.9E-13 90.2 10.1 48 322-369 112-161 (213)
112 3r1w_A Carbonic anhydrase; bet 98.8 1.5E-08 5.2E-13 87.6 10.7 82 300-404 20-118 (189)
113 3ftt_A Putative acetyltransfer 98.8 8.1E-09 2.8E-13 90.1 8.9 104 305-414 60-172 (199)
114 3fsy_A Tetrahydrodipicolinate 98.8 5.5E-09 1.9E-13 95.1 7.4 47 338-404 208-263 (332)
115 2iu8_A LPXD, UDP-3-O-[3-hydrox 98.8 6.5E-09 2.2E-13 99.9 8.4 35 380-414 293-328 (374)
116 2rij_A Putative 2,3,4,5-tetrah 98.8 1.5E-08 5E-13 95.7 9.2 22 266-287 168-191 (387)
117 4hur_A Virginiamycin A acetylt 98.8 9.9E-09 3.4E-13 91.0 7.6 35 380-414 126-161 (220)
118 1krr_A Galactoside O-acetyltra 98.8 2.4E-08 8.3E-13 87.0 9.7 105 305-414 61-173 (203)
119 1qre_A Carbonic anhydrase; bet 98.8 3.2E-08 1.1E-12 89.4 10.5 26 380-405 165-190 (247)
120 1hm9_A GLMU, UDP-N-acetylgluco 98.7 1.5E-08 5.1E-13 100.5 8.3 100 305-405 274-392 (468)
121 3r3i_A UTP--glucose-1-phosphat 98.7 2E-07 6.9E-12 91.0 15.5 350 6-399 125-525 (528)
122 2p2o_A Maltose transacetylase; 98.7 3.4E-08 1.2E-12 84.9 8.8 75 321-414 74-172 (185)
123 4fce_A Bifunctional protein GL 98.7 1.1E-08 3.6E-13 101.3 6.4 81 306-389 269-354 (459)
124 3f1x_A Serine acetyltransferas 98.7 2E-08 6.9E-13 92.7 7.7 35 380-414 258-293 (310)
125 3mc4_A WW/RSP5/WWP domain:bact 98.7 2.5E-08 8.6E-13 90.8 8.1 35 380-414 223-258 (287)
126 1ocx_A Maltose O-acetyltransfe 98.7 3.9E-08 1.3E-12 84.3 8.4 75 321-414 72-170 (182)
127 2pig_A Putative transferase; S 98.7 2.1E-08 7.2E-13 94.0 7.0 107 296-405 74-216 (334)
128 3brk_X Glucose-1-phosphate ade 98.7 3.9E-08 1.3E-12 96.1 8.8 66 305-389 324-390 (420)
129 1j2z_A Acyl-[acyl-carrier-prot 98.7 3.3E-08 1.1E-12 90.5 7.5 74 296-369 4-94 (270)
130 3tk8_A 2,3,4,5-tetrahydropyrid 98.7 3.1E-08 1.1E-12 92.1 7.4 53 302-354 148-203 (316)
131 1ssq_A SAT, serine acetyltrans 98.7 6.5E-08 2.2E-12 87.5 8.9 59 337-414 163-231 (267)
132 3jqy_B NEUO, polysialic acid O 98.6 3.7E-08 1.3E-12 89.2 7.2 83 320-405 84-190 (252)
133 3bfp_A Acetyltransferase; LEFT 98.6 5.3E-08 1.8E-12 84.5 7.8 77 321-404 87-169 (194)
134 3t57_A UDP-N-acetylglucosamine 98.6 3.9E-08 1.3E-12 91.7 7.4 15 338-352 78-92 (305)
135 1t3d_A SAT, serine acetyltrans 98.6 6.8E-08 2.3E-12 88.2 8.7 28 129-156 39-68 (289)
136 4ea9_A Perosamine N-acetyltran 98.6 8E-08 2.7E-12 85.2 8.8 9 380-388 184-192 (220)
137 3hsq_A Acyl-[acyl-carrier-prot 98.6 5.8E-08 2E-12 88.4 7.6 75 296-370 3-95 (259)
138 3r5d_A Tetrahydrodipicolinate 98.6 3E-08 1E-12 90.9 5.5 98 304-406 177-288 (347)
139 3gos_A 2,3,4,5-tetrahydropyrid 98.6 1E-07 3.6E-12 87.2 8.9 83 322-407 117-212 (276)
140 3eg4_A 2,3,4,5-tetrahydropyrid 98.6 1E-07 3.5E-12 88.3 8.9 26 380-405 209-235 (304)
141 3st8_A Bifunctional protein GL 98.6 9.8E-08 3.3E-12 95.4 8.7 98 297-403 344-452 (501)
142 3gue_A UTP-glucose-1-phosphate 98.6 3.1E-06 1.1E-10 82.0 18.5 345 7-394 75-482 (484)
143 3eev_A Chloramphenicol acetylt 98.5 1.5E-07 5E-12 82.9 7.6 35 380-414 118-153 (212)
144 1yp2_A Glucose-1-phosphate ade 98.5 6E-08 2.1E-12 95.6 5.5 97 305-404 330-450 (451)
145 3fsy_A Tetrahydrodipicolinate 98.5 8.1E-08 2.8E-12 87.4 5.4 94 308-404 158-257 (332)
146 2v0h_A Bifunctional protein GL 98.4 1.3E-07 4.4E-12 93.3 5.6 103 296-406 274-385 (456)
147 2wlg_A Polysialic acid O-acety 98.4 2.2E-07 7.4E-12 82.0 6.4 85 321-405 58-164 (215)
148 2p2o_A Maltose transacetylase; 98.4 7.7E-07 2.6E-11 76.4 9.1 57 304-360 73-154 (185)
149 3srt_A Maltose O-acetyltransfe 98.4 7.7E-07 2.6E-11 76.7 9.1 82 305-405 76-182 (188)
150 3hjj_A Maltose O-acetyltransfe 98.3 1.1E-06 3.7E-11 75.9 7.9 31 305-335 78-113 (190)
151 4e8l_A Virginiamycin A acetylt 98.3 8.1E-07 2.8E-11 78.2 7.1 41 371-414 119-160 (219)
152 1ocx_A Maltose O-acetyltransfe 98.3 2.3E-06 7.7E-11 73.2 9.7 49 305-353 72-144 (182)
153 3mc4_A WW/RSP5/WWP domain:bact 98.3 1.2E-06 4E-11 79.8 8.3 60 301-360 166-240 (287)
154 3nz2_A Hexapeptide-repeat cont 98.3 1.8E-06 6.2E-11 74.8 8.9 31 305-335 76-111 (195)
155 1t3d_A SAT, serine acetyltrans 98.3 1.4E-06 4.7E-11 79.5 8.3 35 380-414 216-251 (289)
156 1mr7_A Streptogramin A acetylt 98.3 1.2E-06 4E-11 76.8 7.3 75 337-414 60-155 (209)
157 3q1x_A Serine acetyltransferas 98.3 8.3E-07 2.8E-11 82.1 6.5 19 267-289 128-146 (313)
158 1ssq_A SAT, serine acetyltrans 98.3 1.3E-06 4.6E-11 78.9 7.7 28 129-156 19-48 (267)
159 3f1x_A Serine acetyltransferas 98.3 1.6E-06 5.3E-11 80.1 8.1 15 380-394 270-285 (310)
160 1krr_A Galactoside O-acetyltra 98.3 4.2E-06 1.4E-10 72.7 10.2 31 305-335 75-110 (203)
161 3ftt_A Putative acetyltransfer 98.2 4.7E-06 1.6E-10 72.4 8.4 31 305-335 74-109 (199)
162 1xat_A Xenobiotic acetyltransf 98.1 8.3E-06 2.8E-10 71.4 9.4 40 372-414 112-152 (212)
163 4hur_A Virginiamycin A acetylt 98.1 1.3E-06 4.3E-11 77.3 2.9 28 321-352 54-81 (220)
164 3eev_A Chloramphenicol acetylt 98.0 1.4E-05 4.8E-10 70.1 7.7 14 338-351 59-72 (212)
165 2rij_A Putative 2,3,4,5-tetrah 97.9 1.8E-05 6E-10 74.8 6.5 52 337-408 264-324 (387)
166 3ogz_A UDP-sugar pyrophosphory 97.6 0.00041 1.4E-08 69.1 11.8 223 7-239 113-375 (630)
167 4e8l_A Virginiamycin A acetylt 97.4 0.00021 7.1E-09 62.8 5.7 27 379-405 118-145 (219)
168 1xat_A Xenobiotic acetyltransf 97.3 0.00028 9.5E-09 61.6 6.2 25 380-404 111-136 (212)
169 1mr7_A Streptogramin A acetylt 97.2 0.00039 1.3E-08 60.6 5.8 14 338-351 114-127 (209)
170 2i5e_A Hypothetical protein MM 96.9 0.00034 1.2E-08 61.1 2.2 105 7-150 2-111 (211)
171 1qg8_A Protein (spore coat pol 88.1 6.6 0.00023 34.0 12.3 100 33-155 6-116 (255)
172 3bcv_A Putative glycosyltransf 87.5 2.6 9.1E-05 36.2 9.2 107 33-162 10-119 (240)
173 3cgx_A Putative nucleotide-dip 86.0 1.6 5.4E-05 38.4 6.8 87 41-153 38-129 (242)
174 1xhb_A Polypeptide N-acetylgal 73.0 23 0.00077 34.1 10.9 106 33-159 34-146 (472)
175 2ffu_A Ppgalnact-2, polypeptid 66.3 24 0.00083 34.2 9.5 100 33-158 71-177 (501)
176 2d7i_A Polypeptide N-acetylgal 64.6 29 0.00098 34.5 9.7 103 33-157 117-226 (570)
177 2z86_A Chondroitin synthase; G 62.5 34 0.0012 34.2 9.9 104 33-158 98-205 (625)
178 3ckj_A Putative uncharacterize 58.1 55 0.0019 29.6 9.8 109 34-163 54-169 (329)
179 2z86_A Chondroitin synthase; G 53.4 55 0.0019 32.6 9.7 101 33-156 380-483 (625)
180 3f1y_A Mannosyl-3-phosphoglyce 47.8 55 0.0019 30.6 8.0 52 108-165 165-219 (387)
181 4fix_A UDP-galactofuranosyl tr 39.5 56 0.0019 33.0 7.1 103 34-158 186-299 (657)
182 2xvy_A Chelatase, putative; me 38.2 23 0.00078 31.2 3.6 25 38-63 63-87 (269)
183 4hg6_A Cellulose synthase subu 32.7 1.4E+02 0.0046 31.0 8.9 42 108-155 224-266 (802)
184 2nxv_A ATP synthase subunits r 20.8 3.7E+02 0.013 22.6 8.3 41 108-154 60-101 (249)
No 1
>1yp2_A Glucose-1-phosphate adenylyltransferase small subunit; ADP-glucose synthase, ADP-glucose pyrophosphorylase, agpase B; HET: PMB; 2.11A {Solanum tuberosum} SCOP: b.81.1.4 c.68.1.6 PDB: 1yp3_A* 1yp4_A*
Probab=100.00 E-value=7.1e-55 Score=433.72 Aligned_cols=394 Identities=57% Similarity=1.008 Sum_probs=293.1
Q ss_pred ccccceEEEEEcCCCCCcccccccCCcccceeeCCcceeehhehhhhhccCCcEEEEEcccChhHHHHHHHhhccCCCCc
Q 014953 4 RDARTVAAVILGGGAGTRLYPLTKQRAKPAVPIGGAYRLIDVPMSNCINSGINKVYILTQYNSASLNRHLARAYNYGSGV 83 (415)
Q Consensus 4 ~~~~~~~aVILAaG~g~Rl~plt~~~pK~llpv~g~~pli~~~l~~l~~~gi~~I~vv~~~~~~~i~~~l~~~~~~~~~~ 83 (415)
..|++|+|||||||+|+||+|||..+||+|+|++|+||||+|++++|.++|+++|+|+++++.+++.+|+.+.+ +.+.
T Consensus 16 ~~~~~~~avILAaG~gtRl~plT~~~pK~llpi~g~~pli~~~l~~l~~~g~~~i~vv~~~~~~~i~~~~~~~~--~~~~ 93 (451)
T 1yp2_A 16 DASRSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAY--ASNM 93 (451)
T ss_dssp CHHHHEEEEEC------CCTTTTTTSCGGGCEETTTEETTHHHHHHHHHTTCCEEEEEESCCCHHHHHHHHHHC--C---
T ss_pred ccccceEEEEECCCCCCcccchhcCCcceeeEECCcceeHHHHHHHHHHCCCCEEEEEeccCHHHHHHHHhhhh--hccc
Confidence 34667999999999999999999999999999999878999999999999999999999999899999987643 1000
Q ss_pred -cc-CCceEEEecCccCCCCCCCccccchHHHHHHhhhhhcCCCCCCcCeEEEEcCCeecccChHHHHHHHHHcCCcEEE
Q 014953 84 -TF-GDGCVEVLAATQTPGEAGKRWFQGTADAVRQFHWLFEDPRNKVIEDVLILSGDHLYRMDYMDFVQNHRQSGADITI 161 (415)
Q Consensus 84 -~~-~~~~v~i~~~~~~~~~~~~~~~~Gt~~al~~~~~~i~~~~~~~~~~~lv~~gD~i~~~~l~~~l~~h~~~~~~~ti 161 (415)
++ ....++++...+.+ .+.+|+.||+++++.++.++... ..++|++++||++++.+|.+++++|+++++++|+
T Consensus 94 ~~~~~~~~v~i~~~~~~~--~~~~~~~Gt~~al~~a~~~~~~~---~~~~~lv~~~D~~~~~~l~~l~~~~~~~~~~~tl 168 (451)
T 1yp2_A 94 GGYKNEGFVEVLAAQQSP--ENPDWFQGTADAVRQYLWLFEEH---TVLEYLILAGDHLYRMDYEKFIQAHRETDADITV 168 (451)
T ss_dssp -----CCEEEEEESCSST--TSCCCCCSHHHHHHHTHHHHTTS---CCSEEEEECSCEECCCCHHHHHHHHHHTTCSEEE
T ss_pred ccccccCcEEEecccccc--cccccccCcHHHHHHHHHHHHhc---CCCeEEEecCcEEEcCCHHHHHHHHHHcCCcEEE
Confidence 01 11224555433321 12345679999999999888531 1479999999999999999999999999999999
Q ss_pred EEEEcCCCcCCcccEEEECCCCCeEEEEEcCCcccccccccccccccccccccccccceeeeeEEEEeHHHHHHHHhhhC
Q 014953 162 SCLPMDDSRASDFGLMKINNEGRVLSFSEKPKGKDLKAMAVDTTVLGLSKQEAEEKPYIASMGVYLFKKEILLNLLRWRF 241 (415)
Q Consensus 162 ~~~~~~~~~~~~~g~v~~d~~~~v~~~~ek~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Giyi~~~~~l~~~l~~~~ 241 (415)
++.+.+.+.+.+||++.+|++++|..|.|||..+....+.++.+++...+......++++++|+|+|++++|..+++...
T Consensus 169 ~~~~~~~~~~~~~g~v~~d~~~~v~~~~ekp~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~Giy~~~~~~l~~~l~~~~ 248 (451)
T 1yp2_A 169 AALPMDEKRATAFGLMKIDEEGRIIEFAEKPQGEQLQAMKVDTTILGLDDKRAKEMPFIASMGIYVISKDVMLNLLRDKF 248 (451)
T ss_dssp EEEEECHHHHTTSEEEEECTTSBEEEEEESCCHHHHHHTCCCGGGGSCCHHHHHHCCEEEEEEEEEEEHHHHHHHHHTTC
T ss_pred EEEEcChhhcccCCEEEECCCCCEEEEEECCCchhhccccccccccccccccccCCcceEEeeEEEEcHHHHHHHHHhhc
Confidence 88877533367899999998899999999998654333334434332211111113578999999999999877776654
Q ss_pred CCCCcccccchhhhccc-ceEEEEEeCceEEecCCHHHHHHHHHhhcCCC-CCCCccCCCCCccccCccCCCeeecCCcc
Q 014953 242 PTANDFGSEIIPASANE-QFLKAYLFNDYWEDIGTIRSFFEANLALTAHP-PMFSFYDATKPIYTSRRNLPPSKIDDSKI 319 (415)
Q Consensus 242 ~~~~~~~~~~l~~l~~~-~~i~~~~~~g~~~di~t~~~y~~an~~~l~~~-~~~~~~~~~~~~~~~~~i~~~~~i~~~~i 319 (415)
+...+|.+++++.++++ .++++|.++++|.|++|+++|.+|+++++++. +..+++++++.+.+.+.+.+++++.++.|
T Consensus 249 ~~~~~~~~~~l~~~i~~g~~v~~~~~~~~w~digt~~~l~~a~~~l~~~~~~~~~~~~~~~~i~~~~~i~~~~~i~~~~I 328 (451)
T 1yp2_A 249 PGANDFGSEVIPGATSLGMRVQAYLYDGYWEDIGTIEAFYNANLGITKKPVPDFSFYDRSAPIYTQPRYLPPSKMLDADV 328 (451)
T ss_dssp TTCCCTTTTHHHHHHHTTCCEEEEECCSCCEECSSHHHHHHHHHGGGCSSSCSSCSCCSSSCCCCCCCCCCCEEEEEEEE
T ss_pred ccccchHhhHHHHHHhcCCceEEEEeCCEEEECCCHHHHHHHHHHHhcccccchhccCCCCeeccCCccCCCeEEcceEE
Confidence 44556777899988876 78999999999999999999999999999877 66778899999999999999999988888
Q ss_pred ccceECCCCEEcceEEeeeEEccCcEECCCcEEeecEEeCCccccchhHHHhhhhCCCcceEeCCCCEEeeeEECCCeEE
Q 014953 320 VDSIISHGSFITSSFIEHSVVGIRSRINANVHLKDTMMLGADFYETDAEVASLLAEGRVPVGIGENTKIKYEQLKPICHI 399 (415)
Q Consensus 320 ~~~~ig~~~~I~~~~i~~svig~~~~ig~~~~i~~sii~~~~~~~~~~~~~~~~~~~~~~~~Ig~~~~i~~~~i~~~~~i 399 (415)
.++.||++|+|+++.|.+|+||++|.||++++|.+++++++...+...........|...+.||+||.|.+|+||+++.|
T Consensus 329 ~~~~Ig~~~~I~~~~i~~~~Ig~~~~Ig~~~~I~~~~~~~~~~~~~~~~~~~~~~~g~~~~~Ig~~~~i~~~~Ig~~~~I 408 (451)
T 1yp2_A 329 TDSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDSLLMGADYYETDADRKLLAAKGSVPIGIGKNCHIKRAIIDKNARI 408 (451)
T ss_dssp EEEEECTTCEEEEEEEESCEECTTCEECTTCEEESCEECCCSSCCCHHHHHHHHTTTCCCSEECTTCEEESEEECTTCEE
T ss_pred eCeEECCCCEEcceEEeccEECCCCEECCCCEEcCceEECCCCcccccccccccccCceeEEECCCCEEeccEeCCCcEE
Confidence 89999999999888889999999999999999999999988222221111111111211134555555545555555555
Q ss_pred cCCcc
Q 014953 400 VETKY 404 (415)
Q Consensus 400 ~~~~~ 404 (415)
|+++.
T Consensus 409 G~~~~ 413 (451)
T 1yp2_A 409 GDNVK 413 (451)
T ss_dssp CTTCE
T ss_pred CCCCE
Confidence 54443
No 2
>3brk_X Glucose-1-phosphate adenylyltransferase; ADP-glucose pyrophosphorylase, allostery, kinetics, structure-function relationships; 2.10A {Agrobacterium tumefaciens}
Probab=100.00 E-value=1.3e-52 Score=413.36 Aligned_cols=363 Identities=35% Similarity=0.583 Sum_probs=291.9
Q ss_pred ccceEEEEEcCCCCCcccccccCCcccceeeCCcceeehhehhhhhccCCcEEEEEcccChhHHHHHHHhhccCCCCccc
Q 014953 6 ARTVAAVILGGGAGTRLYPLTKQRAKPAVPIGGAYRLIDVPMSNCINSGINKVYILTQYNSASLNRHLARAYNYGSGVTF 85 (415)
Q Consensus 6 ~~~~~aVILAaG~g~Rl~plt~~~pK~llpv~g~~pli~~~l~~l~~~gi~~I~vv~~~~~~~i~~~l~~~~~~~~~~~~ 85 (415)
|++|+|||||||.|+||+|||..+||+|+|++|+||||+|++++|.++|+++|+|+++++.+++.+|+.+.|.+.. .+
T Consensus 10 m~~~~avILAaG~gtRl~plT~~~pK~llpi~gk~pli~~~l~~l~~~gi~~i~vv~~~~~~~i~~~~~~~~~~~~--~~ 87 (420)
T 3brk_X 10 ARDAMAYVLAGGRGSRLKELTDRRAKPAVYFGGKARIIDFALSNALNSGIRRIGVATQYKAHSLIRHLQRGWDFFR--PE 87 (420)
T ss_dssp GGGEEEEEEECCCCGGGGGGGSSSCGGGSEETTTEETHHHHHHHHHHTTCCEEEEEECTTCHHHHHHHHHHSCCCC--GG
T ss_pred hhceEEEEEcCCCCCccchhhcCCcccccccCCCCcHHHHHHHHHHhCCCCeEEEEeCCChHHHHHHHhhhhcccc--cc
Confidence 3468999999999999999999999999999999679999999999999999999999998999999876432110 01
Q ss_pred CCceEEEecCccCCCCCCCccccchHHHHHHhhhhhcCCCCCCcCeEEEEcCCeecccChHHHHHHHHHcCCcEEEEEEE
Q 014953 86 GDGCVEVLAATQTPGEAGKRWFQGTADAVRQFHWLFEDPRNKVIEDVLILSGDHLYRMDYMDFVQNHRQSGADITISCLP 165 (415)
Q Consensus 86 ~~~~v~i~~~~~~~~~~~~~~~~Gt~~al~~~~~~i~~~~~~~~~~~lv~~gD~i~~~~l~~~l~~h~~~~~~~ti~~~~ 165 (415)
....+.++...+.. ....|+.||+++++.++.++... ..++|++++||++++.++.++++.|+++++++|+++.+
T Consensus 88 ~~~~v~i~~~~~~~--~~~~~~~Gt~~al~~a~~~l~~~---~~~~~lv~~~D~~~~~~l~~l~~~~~~~~~~~tl~~~~ 162 (420)
T 3brk_X 88 RNESFDILPASQRV--SETQWYEGTADAVYQNIDIIEPY---APEYMVILAGDHIYKMDYEYMLQQHVDSGADVTIGCLE 162 (420)
T ss_dssp GTCEEEEECCC---------CCCCHHHHHHTTHHHHHHH---CCSEEEEEESSCEECBCTHHHHHHHHHTTCSEEEEEEE
T ss_pred ccCCEEEeCccccc--cCCccccCCHHHHHHHHHHHHhc---CCCEEEEecccEEEchHHHHHHHHHHHcCCeEEEEEee
Confidence 11124454433210 01124479999999999888520 13789999999999999999999999999999999887
Q ss_pred cCCCcCCcccEEEECCCCCeEEEEEcCCcccccccccccccccccccccccccceeeeeEEEEeHHHHHHHHhhhCC---
Q 014953 166 MDDSRASDFGLMKINNEGRVLSFSEKPKGKDLKAMAVDTTVLGLSKQEAEEKPYIASMGVYLFKKEILLNLLRWRFP--- 242 (415)
Q Consensus 166 ~~~~~~~~~g~v~~d~~~~v~~~~ek~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Giyi~~~~~l~~~l~~~~~--- 242 (415)
.+...+..|+++.+|++++|..|.|||..+... .....++++++|+|+|++++|..+++...+
T Consensus 163 ~~~~~~~~~g~v~~d~~g~v~~~~ekp~~~~~~--------------~~~~~~~~~~~Giy~~~~~~l~~~l~~~~~~~~ 228 (420)
T 3brk_X 163 VPRMEATGFGVMHVNEKDEIIDFIEKPADPPGI--------------PGNEGFALASMGIYVFHTKFLMEAVRRDAADPT 228 (420)
T ss_dssp EETTGGGGSEEEEECTTSBEEEEEESCSSCCCB--------------TTBTTEEEEEEEEEEEEHHHHHHHHTSSCCC--
T ss_pred cCccccCcccEEEECCCCcEEEeEeCCCccccc--------------cccccceEEeeeeEEEeHHHHHHHHHHhcccCC
Confidence 644346789999998889999999998643210 000124789999999999988666654322
Q ss_pred CCCcccccchhhhcccceEEEEEe-----------CceEEecCCHHHHHHHHHhhcCCCCCCCccCCCCCccccCccCCC
Q 014953 243 TANDFGSEIIPASANEQFLKAYLF-----------NDYWEDIGTIRSFFEANLALTAHPPMFSFYDATKPIYTSRRNLPP 311 (415)
Q Consensus 243 ~~~~~~~~~l~~l~~~~~i~~~~~-----------~g~~~di~t~~~y~~an~~~l~~~~~~~~~~~~~~~~~~~~i~~~ 311 (415)
...+|..++++.+++++++++|.+ +++|.||+|+++|.+|+++++++++...++.+.+.+.+.+.+.|+
T Consensus 229 ~~~~~~~d~l~~li~~g~v~~~~~~~~~~~~~~~~~~~~~dI~t~~d~~~a~~~ll~~~~~~~~~~~~~~i~~~~~i~~~ 308 (420)
T 3brk_X 229 SSRDFGKDIIPYIVEHGKAVAHRFADSCVRSDFEHEPYWRDVGTIDAYWQANIDLTDVVPDLDIYDKSWPIWTYAEITPP 308 (420)
T ss_dssp --------CTTHHHHHSCEEEEEHHHHBCCCTTCSSCCEECCCSHHHHHHHHHHTTSSSCSSCTTCCSSCCCCCCCCCCC
T ss_pred ccccchHHHHHHHhhhCcEEEEEeccccccccccCCCEEEECCCHHHHHHHHHHHhCCCchhhcCCCCCceeeccccCCC
Confidence 123566789999888889999999 899999999999999999999887766677788888899999999
Q ss_pred eee-c-----CCccccceECCCCEEcceEEeeeEEccCcEECCCcEEeecEEeCCccccchhHHHhhhhCCCcceEeCCC
Q 014953 312 SKI-D-----DSKIVDSIISHGSFITSSFIEHSVVGIRSRINANVHLKDTMMLGADFYETDAEVASLLAEGRVPVGIGEN 385 (415)
Q Consensus 312 ~~i-~-----~~~i~~~~ig~~~~I~~~~i~~svig~~~~ig~~~~i~~sii~~~~~~~~~~~~~~~~~~~~~~~~Ig~~ 385 (415)
+++ . ++.+.++.||++|+|.++.|.+|+||++|+||++|.|.+|+|+++ |.||+|
T Consensus 309 ~~i~~~~~~~~~~i~~~~ig~~~~I~~~~i~~~~ig~~~~I~~~~~i~~~~i~~~-------------------~~i~~~ 369 (420)
T 3brk_X 309 AKFVHDDEDRRGSAVSSVVSGDCIISGAALNRSLLFTGVRANSYSRLENAVVLPS-------------------VKIGRH 369 (420)
T ss_dssp CEEECBCSSCBCEEESCEECSSCEEESCEEESCEECTTCEECTTCEEEEEEECTT-------------------CEECTT
T ss_pred cEEecccccCCcEecCCEECCCCEEcCCEEeCcEEcCCCEECCCCEEcceEEcCC-------------------CEECCC
Confidence 999 5 677889999999999778999999999999999999999999999 899999
Q ss_pred CEEeeeEECCCeEEcCCcccCcc
Q 014953 386 TKIKYEQLKPICHIVETKYDSST 408 (415)
Q Consensus 386 ~~i~~~~i~~~~~i~~~~~~~~~ 408 (415)
|.|.+|+||+++.|++++.+.+.
T Consensus 370 ~~i~~~~ig~~~~i~~~~~i~~~ 392 (420)
T 3brk_X 370 AQLSNVVIDHGVVIPEGLIVGED 392 (420)
T ss_dssp CEEEEEEECTTCEECTTCEESSC
T ss_pred CEEeceEECCCCEECCCCEEeCC
Confidence 99999999999999999976554
No 3
>3st8_A Bifunctional protein GLMU; acetyltransferase, pyrophosphorylase, rossmann fold, LEFT-handed-beta-helix, cell shape; HET: COA GP1 UD1; 1.98A {Mycobacterium tuberculosis} PDB: 3spt_A* 3foq_A 3dk5_A 3d8v_A 3d98_A* 3dj4_A 2qkx_A*
Probab=100.00 E-value=9.9e-44 Score=357.40 Aligned_cols=365 Identities=16% Similarity=0.167 Sum_probs=265.9
Q ss_pred ccceEEEEEcCCCCCcccccccCCcccceeeCCcceeehhehhhhhccCCcEEEEEcccChhHHHHHHHhhccCCCCccc
Q 014953 6 ARTVAAVILGGGAGTRLYPLTKQRAKPAVPIGGAYRLIDVPMSNCINSGINKVYILTQYNSASLNRHLARAYNYGSGVTF 85 (415)
Q Consensus 6 ~~~~~aVILAaG~g~Rl~plt~~~pK~llpv~g~~pli~~~l~~l~~~gi~~I~vv~~~~~~~i~~~l~~~~~~~~~~~~ 85 (415)
..++.+||||||.||||+|+| ||+|+||+|| |||+|+|++|.++|+++|+|+++|+.+++++|+.+... .|
T Consensus 10 ~~~~~vvILAaG~GtRm~~~~---pK~l~pv~gk-p~i~~~l~~~~~~g~~~i~vv~~~~~~~i~~~~~~~~~-----~~ 80 (501)
T 3st8_A 10 PGDTAVLVLAAGPGTRMRSDT---PKVLHTLAGR-SMLSHVLHAIAKLAPQRLIVVLGHDHQRIAPLVGELAD-----TL 80 (501)
T ss_dssp --CEEEEEEECSCCGGGCCSS---CGGGCEETTE-EHHHHHHHHHHHHCCSEEEEEECTTHHHHHHHHHHHHH-----HH
T ss_pred CCCceEEEECCcCcccCCCCC---CHHHeEECCh-hHHHHHHHHHHhCCCCEEEEEeCCCHHHHHHHHHHHHH-----hc
Confidence 356889999999999999986 9999999999 99999999999999999999999999999999975321 12
Q ss_pred CCceEEEecCccCCCCCCCccccchHHHHHHhhhhhcCCCCCCcCeEEEEcCCe-eccc-ChHHHHHHHHHcCCcEEEEE
Q 014953 86 GDGCVEVLAATQTPGEAGKRWFQGTADAVRQFHWLFEDPRNKVIEDVLILSGDH-LYRM-DYMDFVQNHRQSGADITISC 163 (415)
Q Consensus 86 ~~~~v~i~~~~~~~~~~~~~~~~Gt~~al~~~~~~i~~~~~~~~~~~lv~~gD~-i~~~-~l~~~l~~h~~~~~~~ti~~ 163 (415)
+.. ++++. |. +++|||+|++++++++.+. ..+++++++||. ++.. .+..++++|+..++++|++.
T Consensus 81 ~~~-i~~~~--q~-------~~lGTa~Av~~a~~~l~~~---~~~~~lvl~gd~~l~~~~~~~~l~~~h~~~~~~~ti~~ 147 (501)
T 3st8_A 81 GRT-IDVAL--QD-------RPLGTGHAVLCGLSALPDD---YAGNVVVTSGDTPLLDADTLADLIATHRAVSAAVTVLT 147 (501)
T ss_dssp TSC-CEEEE--CS-------SCCCHHHHHHHHHTTSCTT---CCSEEEEEETTCTTCCHHHHHHHHHHHHHTTCSEEEEE
T ss_pred CCc-EEEEE--cC-------CCCCcHHHHHHHHHHhccc---cccceeeecCcceeecHHHHHHHHHHHhhccccceEee
Confidence 211 23322 22 2479999999999998641 246899999998 4444 48999999999999999999
Q ss_pred EEcCCCcCCcccEEEECCCCCeEEEEEcCCcccccccccccccccccccccccccceeeeeEEEEeHHHHHHHHhhhCCC
Q 014953 164 LPMDDSRASDFGLMKINNEGRVLSFSEKPKGKDLKAMAVDTTVLGLSKQEAEEKPYIASMGVYLFKKEILLNLLRWRFPT 243 (415)
Q Consensus 164 ~~~~~~~~~~~g~v~~d~~~~v~~~~ek~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Giyi~~~~~l~~~l~~~~~~ 243 (415)
.+.++ +..||.+..|++|+|..+.||++.+.. + ...+++++|+|+|++++|+.+++....+
T Consensus 148 ~~~~d--p~~yG~i~~~~~g~v~~ivEk~~~~~~---------------~--~~i~~in~Giy~f~~~~l~~~l~~l~~~ 208 (501)
T 3st8_A 148 TTLDD--PFGYGRILRTQDHEVMAIVEQTDATPS---------------Q--REIREVNAGVYAFDIAALRSALSRLSSN 208 (501)
T ss_dssp EECSC--CTTSCEEEECTTCCEEEEECGGGCCHH---------------H--HHCCEEEEEEEEEEHHHHHHHHTTCCCC
T ss_pred eccCC--chhccccccccceeEEeeccccCCChh---------------h--ccceeeeceeeeecchhHHHhhhhhccc
Confidence 99887 789999999999999999999876431 1 1247899999999999998887664332
Q ss_pred ---CCcccccchhhhcc-cceEEEEEeCceEEe--cCCHHHHHHHHHhhc---------CCC----CCCCccCCCCCccc
Q 014953 244 ---ANDFGSEIIPASAN-EQFLKAYLFNDYWED--IGTIRSFFEANLALT---------AHP----PMFSFYDATKPIYT 304 (415)
Q Consensus 244 ---~~~~~~~~l~~l~~-~~~i~~~~~~g~~~d--i~t~~~y~~an~~~l---------~~~----~~~~~~~~~~~~~~ 304 (415)
...+..+++..+.. +..+..+..+.+|.. +++...+.++...+. ... +...++.....+.+
T Consensus 209 n~~~e~yltd~i~~~~~~g~~v~~~~~~~~~~~~g~n~~~~l~~~~~~~~~r~~~~~~~~gv~~~dp~~~~i~~dv~IG~ 288 (501)
T 3st8_A 209 NAQQELYLTDVIAILRSDGQTVHASHVDDSALVAGVNNRVQLAELASELNRRVVAAHQLAGVTVVDPATTWIDVDVTIGR 288 (501)
T ss_dssp STTCSCCTTHHHHHHHHTTCCEEEEECSSGGGGCCCSSHHHHHHHHHHHHHHHHHHHHHTTCEESCGGGEEECTTCEECT
T ss_pred ccccccchhhHHHHHHhcCceEEEEeccchhhhcccccHHHHHHHHHHhhhhhhhhhcccCceeeeeccccccCceEECC
Confidence 23334445544443 456777777766554 445555544433221 111 11111122222222
Q ss_pred cCccCCCeee----------------------------------------------cCCccc-cceECCCCEEc-ceEEe
Q 014953 305 SRRNLPPSKI----------------------------------------------DDSKIV-DSIISHGSFIT-SSFIE 336 (415)
Q Consensus 305 ~~~i~~~~~i----------------------------------------------~~~~i~-~~~ig~~~~I~-~~~i~ 336 (415)
.+.|.+++++ +.+.++ +++|+++|.|| .+.++
T Consensus 289 dv~I~~~v~i~g~~~Ig~~~~I~~~~~i~~~~i~~~~~i~~~~i~~~~ig~~~~ig~~~~i~~~~~i~~~v~IG~~v~ik 368 (501)
T 3st8_A 289 DTVIHPGTQLLGRTQIGGRCVVGPDTTLTDVAVGDGASVVRTHGSSSSIGDGAAVGPFTYLRPGTALGADGKLGAFVEVK 368 (501)
T ss_dssp TCEECSSEEEETTCEECTTCEECSSCEEEEEEECTTCEECSEEEEEEEECTTCEECSSEEECTTCEECTTCEEEETEEEE
T ss_pred cceecceeeecCccccccceEEeeceeecCceEecCCEEEeecccccccccccccCCceeecCCcEEccccccCCeEEEc
Confidence 2222222211 011111 46677788888 47889
Q ss_pred eeEEccCcEECCCcEEeecEEeCCccccchhHH---------HhhhhCCCcceEeCCCCEEe-eeEECCCeEEcCCcccC
Q 014953 337 HSVVGIRSRINANVHLKDTMMLGADFYETDAEV---------ASLLAEGRVPVGIGENTKIK-YEQLKPICHIVETKYDS 406 (415)
Q Consensus 337 ~svig~~~~ig~~~~i~~sii~~~~~~~~~~~~---------~~~~~~~~~~~~Ig~~~~i~-~~~i~~~~~i~~~~~~~ 406 (415)
+|+||++|+|+..+.+.+|+|+.++.|++++.+ .+.|+++ |.||.||.|. .+.||+++.|++|+.+.
T Consensus 369 ~s~Ig~gskI~~~~~i~d~~Ig~~v~IG~g~i~~n~dg~~~~~t~IGd~---~~iG~~~~l~~~v~Ig~~~~i~ags~v~ 445 (501)
T 3st8_A 369 NSTIGTGTKVPHLTYVGDADIGEYSNIGASSVFVNYDGTSKRRTTVGSH---VRTGSDTMFVAPVTIGDGAYTGAGTVVR 445 (501)
T ss_dssp SCEECTTCEEEESCEEESEEECSSCEECTTCEEECBCSSSBCCEEECTT---CEECTTCEEESSEEECTTCEECTTCEEC
T ss_pred cceecCCcEEeccceecCceEcCCCEECCCEEEEcccCCcccCCEECCC---cEECCCCEEcCCcEECCCCEECCCCEEC
Confidence 999999999999999999999999999998765 2567777 8888888887 89999999999999999
Q ss_pred cccccccc
Q 014953 407 STISRFSL 414 (415)
Q Consensus 407 ~~~~~~~~ 414 (415)
+-+-++++
T Consensus 446 ~dvp~~~l 453 (501)
T 3st8_A 446 EDVPPGAL 453 (501)
T ss_dssp SCBCTTCE
T ss_pred cccCCCCe
Confidence 88888775
No 4
>2ggo_A 401AA long hypothetical glucose-1-phosphate thymidylyltransferase; beta barrel; 1.80A {Sulfolobus tokodaii} PDB: 2ggq_A*
Probab=100.00 E-value=3.1e-43 Score=344.78 Aligned_cols=343 Identities=18% Similarity=0.261 Sum_probs=250.9
Q ss_pred eEEEEEcCCCCCcccccccCCcccceeeCCcceeehhehhhhhccCCcEEEEEcccChhHHHHHHHhhccCCCCcccCCc
Q 014953 9 VAAVILGGGAGTRLYPLTKQRAKPAVPIGGAYRLIDVPMSNCINSGINKVYILTQYNSASLNRHLARAYNYGSGVTFGDG 88 (415)
Q Consensus 9 ~~aVILAaG~g~Rl~plt~~~pK~llpv~g~~pli~~~l~~l~~~gi~~I~vv~~~~~~~i~~~l~~~~~~~~~~~~~~~ 88 (415)
|+|||||||.|+||+|||..+||+|+|++|+ |||+|++++|.++|+++|+|+++++ +.+++.... .
T Consensus 1 m~aiIlA~G~g~R~~plt~~~~K~ll~i~g~-pli~~~l~~l~~~~~~~i~vv~~~~---i~~~~~~~~---~------- 66 (401)
T 2ggo_A 1 MKAFILAAGSGERLEPITHTRPKAFVPILSK-PLIEYQIEYLRKCGIRDITVIVSSK---NKEYFEKKL---K------- 66 (401)
T ss_dssp CEEEEECCCCCGGGTTGGGTSCGGGCEETTE-EHHHHHHHHHHHTTCCEEEEEECGG---GHHHHHHHC---T-------
T ss_pred CeEEEEcCcCccccCcccCCCCcceeeECCE-eHHHHHHHHHHHCCCCEEEEEeCHH---HHHHhhccC---C-------
Confidence 6899999999999999999999999999999 9999999999999999999999876 666665431 0
Q ss_pred eEEEecCccCCCCCCCccccchHHHHHHhhhhhcCCCCCCcCeEEEEcCCeecc--cChHHHHHHHHHcCCcEEEEEEEc
Q 014953 89 CVEVLAATQTPGEAGKRWFQGTADAVRQFHWLFEDPRNKVIEDVLILSGDHLYR--MDYMDFVQNHRQSGADITISCLPM 166 (415)
Q Consensus 89 ~v~i~~~~~~~~~~~~~~~~Gt~~al~~~~~~i~~~~~~~~~~~lv~~gD~i~~--~~l~~~l~~h~~~~~~~ti~~~~~ 166 (415)
.+.++.... ++.|++++++.+.+ .++|++++||+++. .++.++++ .+++++++.+.
T Consensus 67 ~i~~~~~~~--------~~~g~~~~l~~~~~---------~~~~lv~~~D~~~~~~~~~~~l~~-----~~~~~i~~~~~ 124 (401)
T 2ggo_A 67 EISIVTQKD--------DIKGTGAAILSAKF---------NDEALIIYGDLFFSNEKEICNIIT-----LKENAIIGVKV 124 (401)
T ss_dssp TCEEEECCT--------TCCBSTTTGGGCCC---------SSEEEEEETTEEESCSHHHHHHTT-----CSSEEEEEEEC
T ss_pred cEEEEeCCC--------CCCChHHHHHHhcc---------CCCEEEEeCccccccHHHHHHHHH-----hcCCEEEEEEc
Confidence 023332211 13588888877643 27899999999776 44666665 45678888877
Q ss_pred CCCcCCcccEEEECCCCCeEEEEEcCCcccccccccccccccccccccccccceeeeeEEEEeHHHHHHHHhhhCCC--C
Q 014953 167 DDSRASDFGLMKINNEGRVLSFSEKPKGKDLKAMAVDTTVLGLSKQEAEEKPYIASMGVYLFKKEILLNLLRWRFPT--A 244 (415)
Q Consensus 167 ~~~~~~~~g~v~~d~~~~v~~~~ek~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Giyi~~~~~l~~~l~~~~~~--~ 244 (415)
++ +..|+.+..++++++..+.|||..+. ++++++|+|+|++++|.. ++...+. .
T Consensus 125 ~~--~~~~~~v~~~~~g~v~~~~ek~~~~~---------------------~~~~~~Giy~~~~~~~~~-l~~~~~~~~~ 180 (401)
T 2ggo_A 125 SN--PKDYGVLVLDNQNNLSKIIEKPEIPP---------------------SNLINAGIYKLNSDIFTY-LDKISISERG 180 (401)
T ss_dssp SC--CSSSCEEEECTTSSEEEEECSCSSCS---------------------CSEEEEEEEEEETHHHHH-HHHSCCCSSS
T ss_pred CC--CcceeEEEECCCCeEEEEEECCCCCC---------------------CcEEEEEEEEEcHHHHHH-hhhcCcCCCC
Confidence 65 56788888888899999999886432 468999999999999864 4443211 1
Q ss_pred CcccccchhhhcccceEEEEEeCceEEecCCHHHHHHHHHhhcCCCCC---CCccCCCCC------------ccccCc--
Q 014953 245 NDFGSEIIPASANEQFLKAYLFNDYWEDIGTIRSFFEANLALTAHPPM---FSFYDATKP------------IYTSRR-- 307 (415)
Q Consensus 245 ~~~~~~~l~~l~~~~~i~~~~~~g~~~di~t~~~y~~an~~~l~~~~~---~~~~~~~~~------------~~~~~~-- 307 (415)
.....++++.+..+.++.++..+++|.||+||+||.+|++.+++++.. ...+++.+. +.+.+.
T Consensus 181 ~~~~~~~~~~~~~g~~v~~~~~~~~~~dI~t~edl~~a~~~l~~~~~~~~~~~~i~~~~~i~~~~~ig~~~~I~~~~~i~ 260 (401)
T 2ggo_A 181 ELELTDAINLMAKDHRVKVIEYEGYWMDIGKPWNIIDVNKWALDNLVFSQNLGNVEDNVKIKGKVIIEEDAEIKSGTYIE 260 (401)
T ss_dssp CBCHHHHHHHHHHHSCEEEEECCSCEEECCSHHHHHHHHHHHHHHTCCCEECSEECSSCEEESCEEECTTCEECTTCEEE
T ss_pred ceEHHHHHHHHHCCCcEEEEEecceEEcCCCHHHHHHHHHHHHHhcccccccceeCCCCEEcCCeEEcCCCEECCCCEEe
Confidence 111246676662235899999999999999999999999988765421 011222222 222222
Q ss_pred ----cCCCeee-cCCccc-cceECCCCEEc-ceEEeeeEEccCcEECCCcEEeecEEeCCccccchhHHH----------
Q 014953 308 ----NLPPSKI-DDSKIV-DSIISHGSFIT-SSFIEHSVVGIRSRINANVHLKDTMMLGADFYETDAEVA---------- 370 (415)
Q Consensus 308 ----i~~~~~i-~~~~i~-~~~ig~~~~I~-~~~i~~svig~~~~ig~~~~i~~sii~~~~~~~~~~~~~---------- 370 (415)
|++++.| +++.|. +++||++|.|+ ++.|.+|+|++++.|+.++.|.+++|++++.|+.++.+.
T Consensus 261 ~~~~Ig~~~~I~~~~~i~~~~~Ig~~~~ig~~~~i~~~~i~~~~~i~~~~~i~~~~Ig~~~~Ig~~~~i~~~~~~~~~~~ 340 (401)
T 2ggo_A 261 GPVYIGKGSEIGPNSYLRPYTILVEKNKIGASVEVKESVIMEGSKIPHLSYVGDSVIAEDVNFGAGTLIANLRFDEKEVK 340 (401)
T ss_dssp SSEEECTTCEECSSCEECTTEEECSSCEEEETCEEESEEECTTCEEEESCEEESCEECTTCEECTTCEECCSCTTCSCCE
T ss_pred CCeEECCCCEECCCCEEcCCcEECCCCEECCCCEEecCEEcCCcEECCCceEcceEECCCcEECCCcEEcCcccCCCcee
Confidence 2333333 334443 57778888887 577788888888888888888888888888888888764
Q ss_pred ----------------hhhhCCCcceEeCCCCEEe-eeEECCCeEEcCCcccCcccccccc
Q 014953 371 ----------------SLLAEGRVPVGIGENTKIK-YEQLKPICHIVETKYDSSTISRFSL 414 (415)
Q Consensus 371 ----------------~~~~~~~~~~~Ig~~~~i~-~~~i~~~~~i~~~~~~~~~~~~~~~ 414 (415)
+.++++ |.||.||.|. ++.||+++.|++++.+.+.+.++++
T Consensus 341 ~~i~~~~~~~~~~~~~v~Ig~~---~~Ig~~~~I~~gv~Ig~~~vi~~gsvv~~~vp~~~~ 398 (401)
T 2ggo_A 341 VNVKGKRISSGRRKLGAFIGGH---VRTGINVTILPGVKIGAYARIYPGAVVNRDVGYGEF 398 (401)
T ss_dssp EEETTEEEECSCSSCCCEECTT---CEECTTCEECTTCEECTTCEECTTCEECSCBCTTCE
T ss_pred EEECCceEEecccccCcEECCC---eEECCCcEEcCCcEECCCcEECCCCeEccccCCCcE
Confidence 344555 6677777776 7888888888888888888888775
No 5
>1hm9_A GLMU, UDP-N-acetylglucosamine-1-phosphate uridyltransfe; acetyltransferase, bifunctional, drug design; HET: ACO UD1; 1.75A {Streptococcus pneumoniae} SCOP: b.81.1.4 c.68.1.5 PDB: 1hm8_A* 1hm0_A* 4ac3_A* 4aaw_A* 1g97_A* 1g95_A*
Probab=100.00 E-value=9.3e-43 Score=348.18 Aligned_cols=354 Identities=19% Similarity=0.231 Sum_probs=250.5
Q ss_pred eEEEEEcCCCCCcccccccCCcccceeeCCcceeehhehhhhhccCCcEEEEEcccChhHHHHHHHhhccCCCCcccCCc
Q 014953 9 VAAVILGGGAGTRLYPLTKQRAKPAVPIGGAYRLIDVPMSNCINSGINKVYILTQYNSASLNRHLARAYNYGSGVTFGDG 88 (415)
Q Consensus 9 ~~aVILAaG~g~Rl~plt~~~pK~llpv~g~~pli~~~l~~l~~~gi~~I~vv~~~~~~~i~~~l~~~~~~~~~~~~~~~ 88 (415)
-+|||||||.|+||++ .+||+|+|++|+ |||+|++++|.++|+++|+|++++..+++.+++.+ +
T Consensus 12 ~~~vIlAaG~g~R~~~---~~pK~l~~i~gk-pli~~~l~~l~~~g~~~iivv~~~~~~~i~~~~~~------~------ 75 (468)
T 1hm9_A 12 NFAIILAAGKGTRMKS---DLPKVLHKVAGI-SMLEHVFRSVGAIQPEKTVTVVGHKAELVEEVLAG------Q------ 75 (468)
T ss_dssp EEEEEECCCCCGGGCC---SSCGGGSEETTE-EHHHHHHHHHHTTCCSEEEEEECTTHHHHHHSSSS------S------
T ss_pred CcEEEEcCCCCccCCC---CCCcEeeEECCc-cHHHHHHHHHHhcCCCCEEEEECCCHHHHHHHhCC------C------
Confidence 5799999999999984 689999999999 99999999999999999999999987777665421 1
Q ss_pred eEEEecCccCCCCCCCccccchHHHHHHhhhhhcCCCCCCcCeEEEEcCCe--ecccChHHHHHHHHHcCCcEEEEEEEc
Q 014953 89 CVEVLAATQTPGEAGKRWFQGTADAVRQFHWLFEDPRNKVIEDVLILSGDH--LYRMDYMDFVQNHRQSGADITISCLPM 166 (415)
Q Consensus 89 ~v~i~~~~~~~~~~~~~~~~Gt~~al~~~~~~i~~~~~~~~~~~lv~~gD~--i~~~~l~~~l~~h~~~~~~~ti~~~~~ 166 (415)
+.++... +..|++++++.++.+++.. .++|++++||. +...++.++++.|++.+++++++..+.
T Consensus 76 -i~~v~~~---------~~~G~~~sl~~a~~~~~~~----~~~vlv~~~D~P~i~~~~i~~l~~~~~~~~~~~~i~~~~~ 141 (468)
T 1hm9_A 76 -TEFVTQS---------EQLGTGHAVMMTEPILEGL----SGHTLVIAGDTPLITGESLKNLIDFHINHKNVATILTAET 141 (468)
T ss_dssp -SEEEECS---------SCCCHHHHHHTTHHHHTTC----CSEEEEEETTCTTCCHHHHHHHHHHHHHTTCSEEEEEEEC
T ss_pred -cEEEeCC---------ccCChHHHHHHHHHHhccC----CCeEEEEeCCccccCHHHHHHHHHHHHhcCCcEEEEEecc
Confidence 2222211 1369999999999888521 47899999999 456679999999999888999888887
Q ss_pred CCCcCCcccEEEECCCCCeEEEEEcCCcccccccccccccccccccccccccceeeeeEEEEeHHHHHHHHhhhCCC---
Q 014953 167 DDSRASDFGLMKINNEGRVLSFSEKPKGKDLKAMAVDTTVLGLSKQEAEEKPYIASMGVYLFKKEILLNLLRWRFPT--- 243 (415)
Q Consensus 167 ~~~~~~~~g~v~~d~~~~v~~~~ek~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Giyi~~~~~l~~~l~~~~~~--- 243 (415)
.+ +..|+.+..|++++|..+.|||..... ....++.++|+|+|+++.|.+.++.....
T Consensus 142 ~~--~~~~g~v~~d~~g~v~~~~ek~~~~~~-----------------~~~~~~~~~Giy~f~~~~l~~~l~~~~~~~~~ 202 (468)
T 1hm9_A 142 DN--PFGYGRIVRNDNAEVLRIVEQKDATDF-----------------EKQIKEINTGTYVFDNERLFEALKNINTNNAQ 202 (468)
T ss_dssp SC--CTTSCEEEECTTCCEEEEECTTTCCTT-----------------GGGCCEEEEEEEEEEHHHHHHHHTTCCSCSTT
T ss_pred CC--CCceeEEEECCCCCEEEEEECCCCChH-----------------HhcCeEEEEEEEEEEHHHHHHHHHhhccccCC
Confidence 65 567999999888999999998753210 00247899999999999776666543222
Q ss_pred CCcccccchhhhccc-ceEEEEEeCceEEe--cCCHHHHHHHHHhhcCCC------CCC-------CccC----------
Q 014953 244 ANDFGSEIIPASANE-QFLKAYLFNDYWED--IGTIRSFFEANLALTAHP------PMF-------SFYD---------- 297 (415)
Q Consensus 244 ~~~~~~~~l~~l~~~-~~i~~~~~~g~~~d--i~t~~~y~~an~~~l~~~------~~~-------~~~~---------- 297 (415)
...+..++++.+++. .++++|.++++|.+ ++|++||.+|+..+..+. ... ..++
T Consensus 203 ~~~~~~d~~~~l~~~g~~v~~~~~~g~~~~i~i~t~~dl~~a~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~i~~~~~ 282 (468)
T 1hm9_A 203 GEYYITDVIGIFRETGEKVGAYTLKDFDESLGVNDRVALATAESVMRRRINHKHMVNGVSFVNPEATYIDIDVEIAPEVQ 282 (468)
T ss_dssp CSCCTTHHHHHHHHHTCCEEEEECSSGGGGCCCCSHHHHHHHHHHHHHHHHHHHHHTTCEESCGGGCEECTTCEECTTCE
T ss_pred CeEEHHHHHHHHHHCCCEEEEEEcCChHHhhCCCCHHHHHHHHHHHHHHHHHHHHhcCCEEECCCeeEECCCcEECCCCE
Confidence 223457888887775 58999999999977 559999999997654321 111 1122
Q ss_pred --CCCCccccCccCCCeee-cCCccccceECCCCEEcceEEeeeEEccCcEECCCcEEe-ecEEeCCccccchhHHH---
Q 014953 298 --ATKPIYTSRRNLPPSKI-DDSKIVDSIISHGSFITSSFIEHSVVGIRSRINANVHLK-DTMMLGADFYETDAEVA--- 370 (415)
Q Consensus 298 --~~~~~~~~~~i~~~~~i-~~~~i~~~~ig~~~~I~~~~i~~svig~~~~ig~~~~i~-~sii~~~~~~~~~~~~~--- 370 (415)
+.+.+.+.+.+++++.| +++.|+++.||++|+|+++.|.+|+||++|.||+++.|. +++|+++++|+.++.+.
T Consensus 283 i~~~~~i~~~~~ig~~~~I~~~~~i~~~~ig~~~~i~~~~i~~~~Ig~~~~Ig~~~~i~~~~~ig~~~~Ig~~~~i~~~~ 362 (468)
T 1hm9_A 283 IEANVILKGQTKIGAETVLTNGTYVVDSTIGAGAVITNSMIEESSVADGVTVGPYAHIRPNSSLGAQVHIGNFVEVKGSS 362 (468)
T ss_dssp ECSSCEEESSCEECTTCEECTTCEEESCEECTTCEECSCEEESCEECTTCEECSSCEECSSCEECTTCEEEEEEEEESCE
T ss_pred ECCCcEECCCCEECCCCEECCCCEEeccEEeCCcEEEEEEEeccccCCCcEECCceEEecCcEECCccEECCCcEEeeeE
Confidence 22223333444444444 455555666777777766666777777777777777777 56666666555443321
Q ss_pred ----------------------------------------hhhhCCCcceEeCCCCEEe-eeEECCCeEEcCCcccCccc
Q 014953 371 ----------------------------------------SLLAEGRVPVGIGENTKIK-YEQLKPICHIVETKYDSSTI 409 (415)
Q Consensus 371 ----------------------------------------~~~~~~~~~~~Ig~~~~i~-~~~i~~~~~i~~~~~~~~~~ 409 (415)
+.++++ |.||.||.|. ++.||+++.|++++.+.+.+
T Consensus 363 Ig~~~~i~~~~~i~~~~Ig~~~~Ig~~~~i~~~~~~~~~~~~Ig~~---~~Ig~~~~i~~~v~Ig~~~~i~~~s~v~~~v 439 (468)
T 1hm9_A 363 IGENTKAGHLTYIGNCEVGSNVNFGAGTITVNYDGKNKYKTVIGDN---VFVGSNSTIIAPVELGDNSLVGAGSTITKDV 439 (468)
T ss_dssp ECTTCEEEEEEEEESEEECTTCEECTTCEEECBCSSCBCCEEECTT---CEECTTCEEESSCEECTTCEECTTCEECSCB
T ss_pred EcCCcEeCCceEEccccccCCcEECCCcEEecCcCccCCCcEECCC---eEECCCCEEeCCcEECCCCEECCCCEECCCC
Confidence 222333 4455555554 56777778888888777777
Q ss_pred ccccc
Q 014953 410 SRFSL 414 (415)
Q Consensus 410 ~~~~~ 414 (415)
.+++.
T Consensus 440 ~~~~~ 444 (468)
T 1hm9_A 440 PADAI 444 (468)
T ss_dssp CTTCE
T ss_pred CCCCE
Confidence 76654
No 6
>4fce_A Bifunctional protein GLMU; GLMU. csgid, niaid, structural genomics, national institute allergy and infectious diseases; HET: GP1; 1.96A {Yersinia pseudotuberculosis} PDB: 3fww_A 1hv9_A* 2oi5_A* 2oi6_A* 2oi7_A* 1fxj_A* 1fwy_A*
Probab=100.00 E-value=1.8e-41 Score=338.14 Aligned_cols=353 Identities=16% Similarity=0.202 Sum_probs=244.4
Q ss_pred cceEEEEEcCCCCCcccccccCCcccceeeCCcceeehhehhhhhccCCcEEEEEcccChhHHHHHHHhhccCCCCcccC
Q 014953 7 RTVAAVILGGGAGTRLYPLTKQRAKPAVPIGGAYRLIDVPMSNCINSGINKVYILTQYNSASLNRHLARAYNYGSGVTFG 86 (415)
Q Consensus 7 ~~~~aVILAaG~g~Rl~plt~~~pK~llpv~g~~pli~~~l~~l~~~gi~~I~vv~~~~~~~i~~~l~~~~~~~~~~~~~ 86 (415)
++|.|||||||.|+||+| ++||+|+|++|+ |||+|++++|.++|+++|+|++++..+++.+++... +
T Consensus 7 ~~~~aiIlA~G~g~Rl~~---~~pK~l~~i~g~-pli~~~l~~l~~~~~~~i~vv~~~~~~~i~~~~~~~---------~ 73 (459)
T 4fce_A 7 SSMSVVILAAGKGTRMYS---DLPKVLHPLAGK-PMVQHVIDAAMKLGAQHVHLVYGHGGELLKKTLADP---------S 73 (459)
T ss_dssp CCEEEEEEECCCCGGGCC---SSCGGGSEETTE-EHHHHHHHHHHHHTCSCEEEEESSCHHHHHHHC-------------
T ss_pred CcceEEEECCCCCccCCC---CCCcccCeeCCe-eHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHHhccC---------C
Confidence 579999999999999996 789999999999 999999999999999999999999888887776421 1
Q ss_pred CceEEEecCccCCCCCCCccccchHHHHHHhhhhhcCCCCCCcCeEEEEcCCe--ecccChHHHHHHHHHcCCcEEEEEE
Q 014953 87 DGCVEVLAATQTPGEAGKRWFQGTADAVRQFHWLFEDPRNKVIEDVLILSGDH--LYRMDYMDFVQNHRQSGADITISCL 164 (415)
Q Consensus 87 ~~~v~i~~~~~~~~~~~~~~~~Gt~~al~~~~~~i~~~~~~~~~~~lv~~gD~--i~~~~l~~~l~~h~~~~~~~ti~~~ 164 (415)
+.++... ...|++++++.++.++.+ .++|++++||. +...++.++++.|.+ .+++++..
T Consensus 74 ---~~~v~~~---------~~~g~~~~i~~~~~~~~~-----~~~~lv~~~D~P~i~~~~i~~l~~~~~~--~~~~~~~~ 134 (459)
T 4fce_A 74 ---LNWVLQA---------EQLGTGHAMQQAAPHFAD-----DEDILMLYGDVPLISVDTLQRLLAAKPE--GGIGLLTV 134 (459)
T ss_dssp ----CEEECS---------SCCCHHHHHHHHGGGSCT-----TSEEEEEETTCTTCCHHHHHHHHHHCCT--TSEEEEEE
T ss_pred ---cEEEeCC---------CCCCcHHHHHHHHHhcCC-----CCcEEEEeCCcccCCHHHHHHHHHHHhh--CCEEEEEE
Confidence 2222211 136999999999988853 48999999999 455668999998865 56677777
Q ss_pred EcCCCcCCcccEEEECCCCCeEEEEEcCCcccccccccccccccccccccccccceeeeeEEEEeHHHHHHHHhhhCC--
Q 014953 165 PMDDSRASDFGLMKINNEGRVLSFSEKPKGKDLKAMAVDTTVLGLSKQEAEEKPYIASMGVYLFKKEILLNLLRWRFP-- 242 (415)
Q Consensus 165 ~~~~~~~~~~g~v~~d~~~~v~~~~ek~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Giyi~~~~~l~~~l~~~~~-- 242 (415)
+..+ +..|+.+..| ++++..+.|+|..... +..++++++|+|+|+++.|..+++....
T Consensus 135 ~~~~--~~~~g~v~~~-~g~v~~~~ek~~~~~~-----------------~~~~~~~~~Giy~~~~~~l~~~l~~~~~~~ 194 (459)
T 4fce_A 135 KLDN--PSGYGRIVRE-NGDVVGIVEHKDASDA-----------------QREINEINTGILVANGRDLKRWLSLLDNNN 194 (459)
T ss_dssp ECSC--CTTSCEEEEE-TTEEEEEECGGGCCTT-----------------GGGCCEEEEEEEEEEHHHHHHHHHTCCCCS
T ss_pred ecCC--CCcccEEEeC-CCcEEEEEECCCCChH-----------------HhhccEEEEEEEEEEHHHHHHHHHHhCccc
Confidence 7665 5779988887 7899999998653221 0124789999999999988777665321
Q ss_pred -CCCcccccchhhhccc-ceEEEEEeCceE--EecCCHHHHHHHHHhhcCCC------CCCC------------------
Q 014953 243 -TANDFGSEIIPASANE-QFLKAYLFNDYW--EDIGTIRSFFEANLALTAHP------PMFS------------------ 294 (415)
Q Consensus 243 -~~~~~~~~~l~~l~~~-~~i~~~~~~g~~--~di~t~~~y~~an~~~l~~~------~~~~------------------ 294 (415)
....+..++++.++.. .+++++..+++| .+|+||+||..|+..+..+. ....
T Consensus 195 ~~~~~~~~d~~~~~~~~g~~v~~~~~~~~~~~~~I~tp~Dl~~ae~~l~~~~~~~l~~~~~~~~~p~~~~~~~~~~ig~~ 274 (459)
T 4fce_A 195 AQGEFYITDIIALAHADGKKIATVHPTRLSEVEGVNNRLQLSALERVFQTEQAEKLLLAGVMLLDPSRFDLRGELTHGRD 274 (459)
T ss_dssp TTCSCCTTHHHHHHHHTTCCEEEECCSSGGGGCCCSSHHHHHHHHHHHHHHHHHHHHHHTCEESCGGGEEEEEEEEECSS
T ss_pred cCCcEEHHHHHHHHHHCCCeEEEEEcCCHHHhhCCCCHHHHHHHHHHHHHHHHHHHHhCCcEEeCCCeEEEeCcEEECCC
Confidence 1233456777776664 689999999765 67999999999986554321 0111
Q ss_pred -ccCCCCCccccCccCCCeee-cCCccccceECCCCEEc-ceEEeeeEEccCcEECCCcEEe-ecEEeCCccccchhHH-
Q 014953 295 -FYDATKPIYTSRRNLPPSKI-DDSKIVDSIISHGSFIT-SSFIEHSVVGIRSRINANVHLK-DTMMLGADFYETDAEV- 369 (415)
Q Consensus 295 -~~~~~~~~~~~~~i~~~~~i-~~~~i~~~~ig~~~~I~-~~~i~~svig~~~~ig~~~~i~-~sii~~~~~~~~~~~~- 369 (415)
.+++.+.+...+.++.++.| +++.|.++.||++|.|+ ++.|.+++||++|.||++++|. ++++++++.|+.++.+
T Consensus 275 ~~i~~~~~i~~~~~ig~~~~I~~~~~i~~~~Ig~~~~I~~~~~i~~~~Ig~~~~ig~~~~i~~~~~ig~~~~Ig~~~~i~ 354 (459)
T 4fce_A 275 ITIDTNVIIEGHVILGDRVRIGTGCVLKNCVIGDDSEISPYTVLEDARLDANCTVGPFARLRPGAELAEGAHVGNFVEIK 354 (459)
T ss_dssp CEECTTEEEEEEEEECTTCEECTTCEEESCEECTTCEECSSCEEESCEECTTCEECSSEEECTTCEECTTCEEEEEEEEE
T ss_pred cEECCCeeeccceEECCCCEECCCCEEeccEECCCCEECCCcEEeCCEECCCCEECCccEECCCcEECCCcEECCCeEEe
Confidence 11222222222333333444 44555566666677666 5666666666666666666665 4445444444443321
Q ss_pred ------------------------------------------HhhhhCCCcceEeCCCCEEe-eeEECCCeEEcCCcccC
Q 014953 370 ------------------------------------------ASLLAEGRVPVGIGENTKIK-YEQLKPICHIVETKYDS 406 (415)
Q Consensus 370 ------------------------------------------~~~~~~~~~~~~Ig~~~~i~-~~~i~~~~~i~~~~~~~ 406 (415)
.+.|+++ |.||.|+.|. ++.||+++.|++++.+.
T Consensus 355 ~~~i~~~~~i~~~~~i~~~~Ig~~~~ig~~~~i~~~~~~~~~~v~Ig~~---~~IG~~~~I~~gv~Ig~~~~igagsvV~ 431 (459)
T 4fce_A 355 KARLGKGSKAGHLSYLGDAEIGAGVNIGAGTITCNYDGANKFKTIIGDD---VFVGSDTQLVAPVTVANGATIGAGTTVT 431 (459)
T ss_dssp EEEECTTCEEEEEEEEEEEEECTTCEECTTCEEECBCSSCBCCEEECTT---CEECTTCEEESSEEECTTCEECTTCEEC
T ss_pred eeEEcCCCEECCceEECCeEECCCCEECCCCEEeccccccCCCCEECCC---eEEcCCCEEcCCcEECCCCEECCCCEEc
Confidence 1233444 6666666666 78888888888888888
Q ss_pred cccccccc
Q 014953 407 STISRFSL 414 (415)
Q Consensus 407 ~~~~~~~~ 414 (415)
+.+.+++.
T Consensus 432 ~~v~~~~~ 439 (459)
T 4fce_A 432 RDVAENEL 439 (459)
T ss_dssp SCBCTTCE
T ss_pred cccCCCCE
Confidence 88877764
No 7
>2v0h_A Bifunctional protein GLMU; cell WALL, magnesium, cell shape, transferase, peptidoglycan synthesis, associative mechanism; 1.79A {Haemophilus influenzae} PDB: 2v0i_A* 2v0j_A* 2v0k_A* 2v0l_A* 2vd4_A* 2w0v_A* 2w0w_A* 3twd_A*
Probab=100.00 E-value=1.4e-40 Score=331.43 Aligned_cols=307 Identities=17% Similarity=0.226 Sum_probs=207.8
Q ss_pred ccceEEEEEcCCCCCcccccccCCcccceeeCCcceeehhehhhhhccCCcEEEEEcccChhHHHHHHHhhccCCCCccc
Q 014953 6 ARTVAAVILGGGAGTRLYPLTKQRAKPAVPIGGAYRLIDVPMSNCINSGINKVYILTQYNSASLNRHLARAYNYGSGVTF 85 (415)
Q Consensus 6 ~~~~~aVILAaG~g~Rl~plt~~~pK~llpv~g~~pli~~~l~~l~~~gi~~I~vv~~~~~~~i~~~l~~~~~~~~~~~~ 85 (415)
++++.|||||||.|+||++ .+||+|+|++|+ |||+|++++|.++|+++++|+++++.+++.+++.+. +
T Consensus 3 ~~~~~aiIlA~G~g~Rl~~---~~pK~l~~i~gk-pli~~~l~~l~~~~~~~iivv~~~~~~~i~~~~~~~-----~--- 70 (456)
T 2v0h_A 3 KKALSAVILAAGKGTRMYS---DLPKVLHTIAGK-PMVKHVIDTAHQLGSENIHLIYGHGGDLMRTHLANE-----Q--- 70 (456)
T ss_dssp -CCEEEEEECCCCCGGGCS---SSCGGGSEETTE-EHHHHHHHHHHHTTCSCEEEEECTTHHHHHHHTTTC-----C---
T ss_pred CCcceEEEECCCCCcccCC---CCCccccEECCc-cHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHHhhcC-----C---
Confidence 3568999999999999984 689999999999 999999999999999999999999877777765321 1
Q ss_pred CCceEEEecCccCCCCCCCccccchHHHHHHhhhhhcCCCCCCcCeEEEEcCCe--ecccChHHHHHHHHHcCCcEEEEE
Q 014953 86 GDGCVEVLAATQTPGEAGKRWFQGTADAVRQFHWLFEDPRNKVIEDVLILSGDH--LYRMDYMDFVQNHRQSGADITISC 163 (415)
Q Consensus 86 ~~~~v~i~~~~~~~~~~~~~~~~Gt~~al~~~~~~i~~~~~~~~~~~lv~~gD~--i~~~~l~~~l~~h~~~~~~~ti~~ 163 (415)
++++.... ..|++++++.+++++.. .++|++++||. +...++.++++.|.+ ++++++.
T Consensus 71 ----~~~v~~~~---------~~g~~~~~~~~~~~~~~-----~~~vlv~~~D~P~i~~~~i~~l~~~~~~--~~~~~~~ 130 (456)
T 2v0h_A 71 ----VNWVLQTE---------QLGTAHAVQQAAPFFKD-----NENIVVLYGDAPLITKETLEKLIEAKPE--NGIALLT 130 (456)
T ss_dssp ----CEEEECSC---------CCCHHHHHHHHGGGCCT-----TSEEEEEETTCTTCCHHHHHHHHHHCCT--TSEEEEE
T ss_pred ----cEEEeCCC---------CCCcHHHHHHHHHhcCC-----CCeEEEEcCCcceeCHHHHHHHHHHHhc--CCEEEEE
Confidence 22322111 26999999999988753 47999999999 445678999998866 5778877
Q ss_pred EEcCCCcCCcccEEEECCCCCeEEEEEcCCcccccccccccccccccccccccccceeeeeEEEEeHHHHHHHHhhhCCC
Q 014953 164 LPMDDSRASDFGLMKINNEGRVLSFSEKPKGKDLKAMAVDTTVLGLSKQEAEEKPYIASMGVYLFKKEILLNLLRWRFPT 243 (415)
Q Consensus 164 ~~~~~~~~~~~g~v~~d~~~~v~~~~ek~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Giyi~~~~~l~~~l~~~~~~ 243 (415)
.+.++ +..|+.+..| ++++..+.|++..... + ...+++++|+|+|+++.|.+.++.....
T Consensus 131 ~~~~~--~~~~g~v~~~-~g~v~~~~ek~~~~~~---------------~--~~~~~~~~Giy~~~~~~l~~~l~~~~~~ 190 (456)
T 2v0h_A 131 VNLDN--PTGYGRIIRE-NGNVVAIVEQKDANAE---------------Q--LNIKEVNTGVMVSDGASFKKWLARVGNN 190 (456)
T ss_dssp EECSS--CTTSCEEEEE-TTEEEEEECTTTCCHH---------------H--HTCCEEEEEEEEEEHHHHHHHHTTCCCC
T ss_pred eecCC--CCccceEEEc-CCcEEEEEECCCCChh---------------H--hcCcEEEEEEEEEEHHHHHHHHHHhccc
Confidence 77665 5678888887 7899999998763210 0 0236889999999999776666543221
Q ss_pred ---CCcccccchhhhccc-ceEEEEEeCce--EEecCCHHHHHHHHHhhcCCC------CCCCccCC-CCCccccCccCC
Q 014953 244 ---ANDFGSEIIPASANE-QFLKAYLFNDY--WEDIGTIRSFFEANLALTAHP------PMFSFYDA-TKPIYTSRRNLP 310 (415)
Q Consensus 244 ---~~~~~~~~l~~l~~~-~~i~~~~~~g~--~~di~t~~~y~~an~~~l~~~------~~~~~~~~-~~~~~~~~~i~~ 310 (415)
...+..++++.++.. .++.++..+++ |.+|+||+||.+|++.+..+. .....+++ ...+.+.+.+++
T Consensus 191 ~~~~~~~~~d~~~~~~~~g~~v~~~~~~~~~~~~~I~tpeDl~~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~ig~ 270 (456)
T 2v0h_A 191 NAQGEYYLTDLIALANQDNCQVVAVQATDVMEVEGANNRLQLAALERYFQNKQASKLLLEGVMIYDPARFDLRGTLEHGK 270 (456)
T ss_dssp STTCCCCGGGHHHHHHHTTCCEEEEECSCTGGGCCCSSHHHHHHHHHHHHHHHHHHHHHTTCEESCGGGEEEEEEEEECS
T ss_pred cccccEEHHHHHHHHHHcCCEEEEEEeCCcceEEeCCCHHHHHHHHHHHHHHHHHHHHHcCCEEECCCccEEcCceEECC
Confidence 123346777776664 58999999765 579999999999998665321 11122222 122333344444
Q ss_pred Ceee-cCCcc-ccceECCCCEEc-ceEEeeeEEccCcEECCCcEEeecEEeCCcccc
Q 014953 311 PSKI-DDSKI-VDSIISHGSFIT-SSFIEHSVVGIRSRINANVHLKDTMMLGADFYE 364 (415)
Q Consensus 311 ~~~i-~~~~i-~~~~ig~~~~I~-~~~i~~svig~~~~ig~~~~i~~sii~~~~~~~ 364 (415)
++.| +++.| .++.||++|.|+ ++.|.+|+||++|.|++++.|.+++|++++.|+
T Consensus 271 ~~~I~~~~~i~~~~~Ig~~~~I~~~~~i~~~~ig~~~~I~~~~~i~~~~ig~~~~I~ 327 (456)
T 2v0h_A 271 DVEIDVNVIIEGNVKLGDRVKIGTGCVLKNVVIGNDVEIKPYSVLEDSIVGEKAAIG 327 (456)
T ss_dssp SCEECSSEEEEEEEEECTTCEECTTCEEEEEEECTTCEECSSCEEEEEEECTTCEEC
T ss_pred CCEEcCCcEEcCCcEECCCCEECCCCEEEeEEEeCCCEEcCCeEEccCcCCCCcEEC
Confidence 4444 33333 244555555555 455555555555555555554444444444433
No 8
>3juk_A UDP-glucose pyrophosphorylase (GALU); transfer; HET: UPG; 2.30A {Helicobacter pylori} PDB: 3juj_A*
Probab=100.00 E-value=4.3e-37 Score=286.59 Aligned_cols=244 Identities=20% Similarity=0.296 Sum_probs=194.1
Q ss_pred ceEEEEEcCCCCCcccccccCCcccceeeCCcceeehhehhhhhccCCcEEEEEcccChhHHHHHHHhhccCCCCcc---
Q 014953 8 TVAAVILGGGAGTRLYPLTKQRAKPAVPIGGAYRLIDVPMSNCINSGINKVYILTQYNSASLNRHLARAYNYGSGVT--- 84 (415)
Q Consensus 8 ~~~aVILAaG~g~Rl~plt~~~pK~llpv~g~~pli~~~l~~l~~~gi~~I~vv~~~~~~~i~~~l~~~~~~~~~~~--- 84 (415)
.|+|||||||.|+||+|+|..+||+|+||+|+ |||+|+++++.++|+++|+|+++++.+++.+|+...+.+.....
T Consensus 2 ~~~avIlAaG~gtRl~plt~~~pK~ll~i~gk-pli~~~l~~l~~~gi~~i~vv~~~~~~~i~~~~~~~~~l~~~l~~~~ 80 (281)
T 3juk_A 2 IKKCLFPAAGYGTRFLPITKTIPKEMLPIVDK-PLIQYAVEEAMEAGCEVMAIVTGRNKRSLEDYFDTSYEIEHQIQGTN 80 (281)
T ss_dssp CCEEEEECCSCCGGGTTGGGTSCGGGCBSSSS-BHHHHHHHHHHHHTCCEEEEEECTTHHHHHHHTSCCC--------CC
T ss_pred ceEEEEECCcCCcccCccccCCCcccceECCE-EHHHHHHHHHHhCCCCEEEEEecCCHHHHHHHHhcchhhhhhhhccc
Confidence 57999999999999999999999999999999 99999999999999999999999999999988754321111000
Q ss_pred ------------cCCceEEEecCccCCCCCCCccccchHHHHHHhhhhhcCCCCCCcCeEEEEcCCeecccC-----hHH
Q 014953 85 ------------FGDGCVEVLAATQTPGEAGKRWFQGTADAVRQFHWLFEDPRNKVIEDVLILSGDHLYRMD-----YMD 147 (415)
Q Consensus 85 ------------~~~~~v~i~~~~~~~~~~~~~~~~Gt~~al~~~~~~i~~~~~~~~~~~lv~~gD~i~~~~-----l~~ 147 (415)
++. .+.++. +. ++.||+++++.++.++. .++|+|++||++++.+ +.+
T Consensus 81 ~~~~~~~~~~~~~~~-~i~~~~--~~-------~~~Gt~~al~~a~~~l~------~~~~lv~~~D~~~~~~~~~~~l~~ 144 (281)
T 3juk_A 81 KENALKSIRNIIEKC-CFSYVR--QK-------QMKGLGHAILTGEALIG------NEPFAVILADDLCISHDHPSVLKQ 144 (281)
T ss_dssp HHHHHHHHHHHHHHC-EEEEEE--CS-------SCCCHHHHHHHTHHHHC------SSCEEEECTTEEEECTTSCCHHHH
T ss_pred chhhhhhhhccccCc-cEEEEe--cC-------CCCCcHHHHHHHHHHcC------CCCEEEEeCCeeccCccchHHHHH
Confidence 111 122222 21 23699999999999885 3789999999999998 999
Q ss_pred HHHHHHHcCCcEEEEEEEcCCCcCCcccEEEECC--CC--CeEEEEEcCCcccccccccccccccccccccccccceeee
Q 014953 148 FVQNHRQSGADITISCLPMDDSRASDFGLMKINN--EG--RVLSFSEKPKGKDLKAMAVDTTVLGLSKQEAEEKPYIASM 223 (415)
Q Consensus 148 ~l~~h~~~~~~~ti~~~~~~~~~~~~~g~v~~d~--~~--~v~~~~ek~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 223 (415)
+++.|.+.++ .++++...+...+.+||++..|+ +| +|..+.|||..... .++++++
T Consensus 145 l~~~~~~~~~-~~v~~~~~~~~~~~~~g~v~~~~~~~g~~~v~~~~Ekp~~~~~-------------------~~~~~~~ 204 (281)
T 3juk_A 145 MTSLYQKYQC-SIVAIEEVALEEVSKYGVIRGEWLEEGVYEIKDMVEKPNQEDA-------------------PSNLAVI 204 (281)
T ss_dssp HHHHHHHHCS-CEEEEEECCTTTGGGSEEEEEEEEETTEEEEEEEEESCCTTTC-------------------SCSEEEE
T ss_pred HHHHHHHcCC-CEEEEEEechhhcccCCEEEeccCCCCceEEeEEEECcCCCCC-------------------CcceeEE
Confidence 9999998877 67777777555578899999986 77 99999999974321 2478899
Q ss_pred eEEEEeHHHHHHHHhhhCCC--CCcccccchhhhcccceEEEEEeCceEEecCCHHHHHHHHHhhcCC
Q 014953 224 GVYLFKKEILLNLLRWRFPT--ANDFGSEIIPASANEQFLKAYLFNDYWEDIGTIRSFFEANLALTAH 289 (415)
Q Consensus 224 Giyi~~~~~l~~~l~~~~~~--~~~~~~~~l~~l~~~~~i~~~~~~g~~~di~t~~~y~~an~~~l~~ 289 (415)
|+|+|++++|. .++...+. ......++++.++.++++++|.++|+|.|||||++|.+|++.+++.
T Consensus 205 GiYi~~~~~l~-~l~~~~~~~~~e~~l~d~i~~l~~~~~v~~~~~~g~~~dIgt~~d~~~a~~~l~~~ 271 (281)
T 3juk_A 205 GRYILTPDIFE-ILSETKPGKNNEIQITDALRTQAKRKRIIAYQFKGKRYDCGSVEGYIEASNAYYKK 271 (281)
T ss_dssp EEEEECTTHHH-HHHTCCCCGGGSCCHHHHHHHHHHHSCCEEEECCSEEEETTSHHHHHHHHHHHHHH
T ss_pred EEEEECHHHHH-HHHhcCCCCCCceeHHHHHHHHHhcCCEEEEEeCCeEEcCCCHHHHHHHHHHHHhc
Confidence 99999999985 45543211 1122367888888888999999999999999999999999998854
No 9
>4ecm_A Glucose-1-phosphate thymidylyltransferase; HET: DAU; 2.30A {Bacillus anthracis} PDB: 3hl3_A*
Probab=100.00 E-value=5.1e-35 Score=270.65 Aligned_cols=237 Identities=22% Similarity=0.366 Sum_probs=191.9
Q ss_pred ccceEEEEEcCCCCCcccccccCCcccceeeCCcceeehhehhhhhccCCcEEEEEcccCh-hHHHHHHHhhccCCCCcc
Q 014953 6 ARTVAAVILGGGAGTRLYPLTKQRAKPAVPIGGAYRLIDVPMSNCINSGINKVYILTQYNS-ASLNRHLARAYNYGSGVT 84 (415)
Q Consensus 6 ~~~~~aVILAaG~g~Rl~plt~~~pK~llpv~g~~pli~~~l~~l~~~gi~~I~vv~~~~~-~~i~~~l~~~~~~~~~~~ 84 (415)
.+.|+|||||||.|+||+|+|..+||+|+|++|+ |||+|+++++.++|+++|+|++++.+ +++.+++.. +..
T Consensus 22 ~~~m~aiIlAaG~g~Rl~~lt~~~pK~ll~i~g~-pli~~~l~~l~~~g~~~iivv~~~~~~~~~~~~~~~------~~~ 94 (269)
T 4ecm_A 22 SNAMKGIILAGGTGSRLYPITKVTNKHLLPVGRY-PMIYHAVYKLKQCDITDIMIITGKEHMGDVVSFLGS------GQE 94 (269)
T ss_dssp --CEEEEEECCSCCGGGTTTTSSSCGGGSEETTE-EHHHHHHHHHHHTTCCEEEEEECTTTHHHHHHHHTT------SGG
T ss_pred ccCcEEEEECCCCccccccccCCCCceecEECCE-EHHHHHHHHHHHCCCCEEEEECChhhHHHHHHHHhh------ccc
Confidence 3568999999999999999999999999999999 99999999999999999999999754 677777643 223
Q ss_pred cCCceEEEecCccCCCCCCCccccchHHHHHHhhhhhcCCCCCCcCeEEEEcCCeecccChHHHHHHHHHcCCcEEEEEE
Q 014953 85 FGDGCVEVLAATQTPGEAGKRWFQGTADAVRQFHWLFEDPRNKVIEDVLILSGDHLYRMDYMDFVQNHRQSGADITISCL 164 (415)
Q Consensus 85 ~~~~~v~i~~~~~~~~~~~~~~~~Gt~~al~~~~~~i~~~~~~~~~~~lv~~gD~i~~~~l~~~l~~h~~~~~~~ti~~~ 164 (415)
|+.. +.+.. +. ...|++++++.++.++. .++|++++||++++.++.++++.|+++++++++++.
T Consensus 95 ~~~~-i~~~~--~~-------~~~G~~~al~~a~~~~~------~~~~lv~~~D~~~~~~l~~l~~~~~~~~~~~~~~~~ 158 (269)
T 4ecm_A 95 FGVS-FTYRV--QD-------KAGGIAQALGLCEDFVG------NDRMVVILGDNIFSDDIRPYVEEFTNQKEGAKVLLQ 158 (269)
T ss_dssp GTCE-EEEEE--CS-------SCCCHHHHHHTTHHHHT------TSEEEEEETTEEESSCSHHHHHHHHTSSSSEEEEEE
T ss_pred cCce-EEEee--CC-------ccCcHHHHHHHHHHhcC------CCcEEEEeCCccCccCHHHHHHHHHhcCCCeEEEEE
Confidence 3322 22221 11 13699999999998885 489999999999998999999999998999999998
Q ss_pred EcCCCcCCcccEEEECCCCCeEEEEEcCCcccccccccccccccccccccccccceeeeeEEEEeHHHHHHHHhhhCCC-
Q 014953 165 PMDDSRASDFGLMKINNEGRVLSFSEKPKGKDLKAMAVDTTVLGLSKQEAEEKPYIASMGVYLFKKEILLNLLRWRFPT- 243 (415)
Q Consensus 165 ~~~~~~~~~~g~v~~d~~~~v~~~~ek~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Giyi~~~~~l~~~l~~~~~~- 243 (415)
+.++ +..|+++..| +|+|..+.|||..+. ++++++|+|+|++++|. .++...+.
T Consensus 159 ~~~~--~~~~g~v~~d-~g~v~~~~ekp~~~~---------------------~~~~~~Giy~~~~~~l~-~l~~~~~~~ 213 (269)
T 4ecm_A 159 SVDD--PERFGVANIQ-NRKIIEIEEKPKEPK---------------------SSYAVTGIYLYDSKVFS-YIKELKPSA 213 (269)
T ss_dssp ECSC--GGGSEEEEEE-TTEEEEEEESCSSCS---------------------CSEEEEEEEEECTTHHH-HHTSCCBCT
T ss_pred ECCC--CCCceEEEEc-CCEEEEEEECCCCCC---------------------CcEEEEEEEEECHHHHH-hhhhcCCCC
Confidence 8776 5789999987 489999999986432 36889999999999885 44433211
Q ss_pred CC-cccccchhhhcccceEEEEEeCceEEecCCHHHHHHHHHhhcCCC
Q 014953 244 AN-DFGSEIIPASANEQFLKAYLFNDYWEDIGTIRSFFEANLALTAHP 290 (415)
Q Consensus 244 ~~-~~~~~~l~~l~~~~~i~~~~~~g~~~di~t~~~y~~an~~~l~~~ 290 (415)
.. ....++++.++..+++.++..+++|.||+||++|.+|++.+++..
T Consensus 214 ~ge~~l~d~l~~l~~~g~v~~~~~~~~~~dIgt~~dl~~a~~~l~~~~ 261 (269)
T 4ecm_A 214 RGELEITDINNWYLKRGVLTYNEMSGWWTDAGTHVSLQRANALARDIN 261 (269)
T ss_dssp TSCBCHHHHHHHHHHTTCEEEEECCSCEEECSSHHHHHHHHHHTTTCC
T ss_pred CCeeeHHHHHHHHHHcCCEEEEEeCCEEEeCCCHHHHHHHHHHHHhcc
Confidence 11 224678888888889999999999999999999999999987654
No 10
>1tzf_A Glucose-1-phosphate cytidylyltransferase; nucleotidyltransferase, mixed alpha/beta fold; HET: C5G; 2.10A {Salmonella enterica subsp} SCOP: c.68.1.13 PDB: 1wvc_A*
Probab=100.00 E-value=8.7e-34 Score=261.09 Aligned_cols=246 Identities=25% Similarity=0.332 Sum_probs=180.2
Q ss_pred ceEEEEEcCCCCCcccccccCCcccceeeCCcceeehhehhhhhccCCcEEEEEcccChhHHHHHHHhhccCCCCccc--
Q 014953 8 TVAAVILGGGAGTRLYPLTKQRAKPAVPIGGAYRLIDVPMSNCINSGINKVYILTQYNSASLNRHLARAYNYGSGVTF-- 85 (415)
Q Consensus 8 ~~~aVILAaG~g~Rl~plt~~~pK~llpv~g~~pli~~~l~~l~~~gi~~I~vv~~~~~~~i~~~l~~~~~~~~~~~~-- 85 (415)
+|+|||||||.|+||+|+|..+||+|+|++|+ |||+|+++++.++|+++|+|++++..+++.+++.+....+.+..+
T Consensus 2 ~~~avIlAaG~gtRl~~lt~~~pK~l~~i~gk-pli~~~l~~l~~~g~~~i~vv~~~~~~~i~~~~~~~~~~~~~~~~~~ 80 (259)
T 1tzf_A 2 ASKAVILAGGLGTRLSEETIVKPKPMVEIGGK-PILWHIMKMYSVHGIKDFIICCGYKGYVIKEYFANYFLHMSDVTFHM 80 (259)
T ss_dssp CCEEEEEECSCC--------CCCGGGCEETTE-EHHHHHHHHHHHTTCCEEEEEECTTHHHHHHHHHTHHHHHSCEEEEG
T ss_pred CcEEEEECCCCcccCCCccCCCCccccEECCE-EHHHHHHHHHHHCCCCEEEEEcccCHHHHHHHHhhcccccccccccc
Confidence 48899999999999999999999999999999 999999999999999999999999988999988653200001111
Q ss_pred CCceEEEecCccCCCC---CCCccccchHHHHHHhhhhhcCCCCCCcCeEEEEcCCeecccChHHHHHHHHHcCCcEEEE
Q 014953 86 GDGCVEVLAATQTPGE---AGKRWFQGTADAVRQFHWLFEDPRNKVIEDVLILSGDHLYRMDYMDFVQNHRQSGADITIS 162 (415)
Q Consensus 86 ~~~~v~i~~~~~~~~~---~~~~~~~Gt~~al~~~~~~i~~~~~~~~~~~lv~~gD~i~~~~l~~~l~~h~~~~~~~ti~ 162 (415)
+...++++.....+-. ..+....||+++++.++.++.. .++|++++||.+++.++.++++.|.+.++.+|+.
T Consensus 81 ~~~~~~~~~~~~~~~~v~~~~~~~~~gt~~al~~a~~~~~~-----~~~~lv~~~D~~~~~~~~~~~~~~~~~~~~~t~~ 155 (259)
T 1tzf_A 81 AENRMEVHHKRVEPWNVTLVDTGDSSMTGGRLKRVAEYVKD-----DEAFLFTYGDGVADLDIKATIDFHKAHGKKATLT 155 (259)
T ss_dssp GGTEEEETTCCCCCCEEEEEECCSSCCHHHHHHHTGGGTTT-----SSCEEEEETTEEECCCHHHHHHHHHHHCCSEEEE
T ss_pred cccceeeeeccccccceeeeecccccCcHHHHHHHHHhcCC-----CCcEEEEECCEecccCHHHHHHHHHHhCCeEEEE
Confidence 0001222211000000 0001136999999999988842 4789999999999999999999999888887775
Q ss_pred EEEcCCCcCCcccEEEECCCCCeEEEEEcCCcccccccccccccccccccccccccceeeeeEEEEeHHHHHHHHhhhCC
Q 014953 163 CLPMDDSRASDFGLMKINNEGRVLSFSEKPKGKDLKAMAVDTTVLGLSKQEAEEKPYIASMGVYLFKKEILLNLLRWRFP 242 (415)
Q Consensus 163 ~~~~~~~~~~~~g~v~~d~~~~v~~~~ek~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Giyi~~~~~l~~~l~~~~~ 242 (415)
..+ . +..|+++.+| +|+|..|.|||... .+++++|+|+|++++|. .++.
T Consensus 156 ~~~--~--~~~~g~v~~~-~g~v~~~~ekp~~~----------------------~~~~~~Giy~~~~~~l~-~l~~--- 204 (259)
T 1tzf_A 156 ATF--P--PGRFGALDIQ-AGQVRSFQEKPKGD----------------------GAMINGGFFVLNPSVID-LIDN--- 204 (259)
T ss_dssp EEC--C--CCCSEEEEEE-TTEEEEEEESCSCC----------------------SCCEECCCEEECGGGGG-GCCS---
T ss_pred Eec--C--CCCccEEEEc-CCEEEEEEecCCCC----------------------CceEEEEEEEeCHHHHH-hhcc---
Confidence 433 2 4679988888 78999999988642 25789999999999884 3322
Q ss_pred CCCcccccchhhhcccceEEEEEeCceEEecCCHHHHHHHHHhhcCCC
Q 014953 243 TANDFGSEIIPASANEQFLKAYLFNDYWEDIGTIRSFFEANLALTAHP 290 (415)
Q Consensus 243 ~~~~~~~~~l~~l~~~~~i~~~~~~g~~~di~t~~~y~~an~~~l~~~ 290 (415)
...++..++++.++++++++++.++++|.||||++||.+|++.+++..
T Consensus 205 ~~~~~~~~~i~~~~~~~~v~~~~~~~~~~dI~t~~d~~~a~~~~~~~~ 252 (259)
T 1tzf_A 205 DATTWEQEPLMTLAQQGELMAFEHPGFWQPMDTLRDKVYLEGLWEKGK 252 (259)
T ss_dssp TTCCTTTHHHHHHHHTTCEEEEEECSCEEECCSHHHHHHHHHHHHTTC
T ss_pred cccccHHHHHHHHHHcCCEEEEEeCcEEEeCCCHHHHHHHHHHHhcCC
Confidence 123455778888887789999999999999999999999999887643
No 11
>2e3d_A UTP--glucose-1-phosphate uridylyltransferase; UDP-glucose, carbohydrate, pyrophosphorylase; 1.95A {Escherichia coli}
Probab=100.00 E-value=9.2e-34 Score=266.80 Aligned_cols=243 Identities=21% Similarity=0.323 Sum_probs=186.6
Q ss_pred cceEEEEEcCCCCCcccccccCCcccceeeCCcceeehhehhhhhccCCcEEEEEcccChhHHHHHHHhhccCC-----C
Q 014953 7 RTVAAVILGGGAGTRLYPLTKQRAKPAVPIGGAYRLIDVPMSNCINSGINKVYILTQYNSASLNRHLARAYNYG-----S 81 (415)
Q Consensus 7 ~~~~aVILAaG~g~Rl~plt~~~pK~llpv~g~~pli~~~l~~l~~~gi~~I~vv~~~~~~~i~~~l~~~~~~~-----~ 81 (415)
+.|+|||||||.|+||+|+|..+||+|+||+|+ |||+|+++++.++|+++|+|++++..+++.+|+...+.+. .
T Consensus 7 ~~~~avIlAaG~gtRl~plt~~~pK~ll~i~gk-pli~~~l~~l~~~gi~~i~vv~~~~~~~i~~~~~~~~~l~~~l~~~ 85 (302)
T 2e3d_A 7 KVKKAVIPVAGLGTRMLPATKAIPKEMLPLVDK-PLIQYVVNECIAAGITEIVLVTHSSKNSIENHFDTSFELEAMLEKR 85 (302)
T ss_dssp SCCEEEEECCSCCGGGTTTTSSSCGGGCEETTE-EHHHHHHHHHHHTTCCEEEEEECGGGHHHHHHHSCCHHHHHHHC--
T ss_pred cccEEEEECCcCcccCCccccCCCceeeEECCe-EHHHHHHHHHHHCCCCEEEEEeCCCHHHHHHHHhcchhhhhhhhhc
Confidence 468999999999999999999999999999999 9999999999999999999999998889988885421000 0
Q ss_pred C-c----------ccCCceEEEecCccCCCCCCCccccchHHHHHHhhhhhcCCCCCCcCeEEEEcCCeecc-----c--
Q 014953 82 G-V----------TFGDGCVEVLAATQTPGEAGKRWFQGTADAVRQFHWLFEDPRNKVIEDVLILSGDHLYR-----M-- 143 (415)
Q Consensus 82 ~-~----------~~~~~~v~i~~~~~~~~~~~~~~~~Gt~~al~~~~~~i~~~~~~~~~~~lv~~gD~i~~-----~-- 143 (415)
+ . .++. .+.++... +..||+++++.++.++. .++|+|++||++++ .
T Consensus 86 ~~~~~l~~~~~~~~~~~-~i~~~~~~---------~~~Gt~~al~~a~~~~~------~~~~lv~~~D~~~~~~~~~~~~ 149 (302)
T 2e3d_A 86 VKRQLLDEVQSICPPHV-TIMQVRQG---------LAKGLGHAVLCAHPVVG------DEPVAVILPDVILDEYESDLSQ 149 (302)
T ss_dssp --CHHHHHHHHTSCTTC-EEEEEECS---------SCCCHHHHHHHTHHHHC------SSCEEEECTTEEECTTSSCTTT
T ss_pred cchhhhhhhhhccccCc-ceEEeeCC---------ccCCHHHHHHHHHHHcC------CCcEEEEcCCccccCccccchH
Confidence 0 0 0011 12232211 23699999999999885 37899999999877 2
Q ss_pred -ChHHHHHHHHHcCCcEEEEEEEcCCCcCCcccEEEEC----CCC---CeEEEEEcCCcccccccccccccccccccccc
Q 014953 144 -DYMDFVQNHRQSGADITISCLPMDDSRASDFGLMKIN----NEG---RVLSFSEKPKGKDLKAMAVDTTVLGLSKQEAE 215 (415)
Q Consensus 144 -~l~~~l~~h~~~~~~~ti~~~~~~~~~~~~~g~v~~d----~~~---~v~~~~ek~~~~~~~~~~~~~~~~~~~~~~~~ 215 (415)
++.++++.|++.++ .++++.+..+ +..||++..+ ++| +|..|.|||.....
T Consensus 150 ~~l~~l~~~~~~~~~-~~i~~~~~~~--~~~yg~v~~~~~~~~~g~~~~v~~~~ekp~~~~~------------------ 208 (302)
T 2e3d_A 150 DNLAEMIRRFDETGH-SQIMVEPVAD--VTAYGVVDCKGVELAPGESVPMVGVVEKPKADVA------------------ 208 (302)
T ss_dssp STHHHHHHHHHHHCC-EEEEEEECSC--GGGSEEEECTTCCCCTTCEEEECEEEESCCTTTC------------------
T ss_pred HHHHHHHHHHHhcCC-cEEEEEEccC--CCCccEEEecccccCCCCceeEEEEEECCCCCcc------------------
Confidence 79999999988776 7777777643 5789988864 456 89999999864221
Q ss_pred cccceeeeeEEEEeHHHHHHHHhhhCCC--CCcccccchhhhcccceEEEEEeCceEEecCCHHHHHHHHHhhcCC
Q 014953 216 EKPYIASMGVYLFKKEILLNLLRWRFPT--ANDFGSEIIPASANEQFLKAYLFNDYWEDIGTIRSFFEANLALTAH 289 (415)
Q Consensus 216 ~~~~l~~~Giyi~~~~~l~~~l~~~~~~--~~~~~~~~l~~l~~~~~i~~~~~~g~~~di~t~~~y~~an~~~l~~ 289 (415)
.++++++|+|+|++++|. .++...+. ...+..++++.+++++++.++.++++|.|||||++|.+|++.++..
T Consensus 209 -~~~~~~~Giyi~~~~~l~-~l~~~~~~~~~~~~l~d~i~~l~~~~~v~~~~~~~~~~DIgt~~d~~~a~~~~~~~ 282 (302)
T 2e3d_A 209 -PSNLAIVGRYVLSADIWP-LLAKTPPGAGDEIQLTDAIDMLIEKETVEAYHMKGKSHDCGNKLGYMQAFVEYGIR 282 (302)
T ss_dssp -SCSEEEEEEEEECTTHHH-HHTCCCC----CCCHHHHHHHHHHHSCEEEEECCSCEEECSSHHHHHHHHHHHHHH
T ss_pred -ccceEEEEEEEECHHHHH-HHHhhCCCCCCceehHHHHHHHHHhCCEEEEEeCCeEEcCCCHHHHHHHHHHHHhc
Confidence 246889999999999885 44443221 1122357778777767999999999999999999999999766543
No 12
>2ux8_A Glucose-1-phosphate uridylyltransferase; UGPG, GALU pyrophosphorylase, nucleotidyltransferase; HET: G1P; 2.65A {Sphingomonas elodea}
Probab=100.00 E-value=1.1e-33 Score=265.56 Aligned_cols=248 Identities=20% Similarity=0.243 Sum_probs=172.5
Q ss_pred cccceEEEEEcCCCCCcccccccCCcccceeeCCcceeehhehhhhhccCCcEEEEEcccChhHHHHHHHhhccC-----
Q 014953 5 DARTVAAVILGGGAGTRLYPLTKQRAKPAVPIGGAYRLIDVPMSNCINSGINKVYILTQYNSASLNRHLARAYNY----- 79 (415)
Q Consensus 5 ~~~~~~aVILAaG~g~Rl~plt~~~pK~llpv~g~~pli~~~l~~l~~~gi~~I~vv~~~~~~~i~~~l~~~~~~----- 79 (415)
....|+|||||||.|+||+|+|..+||+|+||+|+ |||+|+++++.++|+++|+|++++..+++.+++...+.+
T Consensus 11 ~~~~~~avIlAaG~gtRl~plt~~~pK~ll~i~gk-pli~~~l~~l~~~g~~~i~vv~~~~~~~i~~~~~~~~~l~~~l~ 89 (297)
T 2ux8_A 11 IKPLRKAVFPVAGLGTRFLPATKAMPKEMLPVVDR-PLIQYAVDEAVEAGIEQMIFVTGRGKSALEDHFDIAYELEATMA 89 (297)
T ss_dssp CCCCCEEEEEECCCCGGGTTTTSSSCGGGCEETTE-EHHHHHHHHHHHTTCCEEEEEECTTCHHHHHHTSCCHHHHHHHH
T ss_pred ccCccEEEEECCCCccccCccccCCCceeeeECCe-EHHHHHHHHHHhCCCCEEEEEeCCCHHHHHHHHhhhhhhhhhhh
Confidence 45669999999999999999999999999999999 999999999999999999999999888888887532100
Q ss_pred CCCc---------ccCCceEEEecCccCCCCCCCccccchHHHHHHhhhhhcCCCCCCcCeEEEEcCCeecc---cChHH
Q 014953 80 GSGV---------TFGDGCVEVLAATQTPGEAGKRWFQGTADAVRQFHWLFEDPRNKVIEDVLILSGDHLYR---MDYMD 147 (415)
Q Consensus 80 ~~~~---------~~~~~~v~i~~~~~~~~~~~~~~~~Gt~~al~~~~~~i~~~~~~~~~~~lv~~gD~i~~---~~l~~ 147 (415)
..+. .++. .+.++... +..||+++++.++.++. .++|+|++||++++ .++.+
T Consensus 90 ~~~~~~~~~~~~~~~g~-~i~~~~~~---------~~~Gt~~al~~a~~~~~------~~~~lv~~~D~~~~~~~~~l~~ 153 (297)
T 2ux8_A 90 ARGKSLDVLDGTRLKPG-NIAYVRQQ---------EPMGLGHAVWCARDIVG------DEPFAVLLPDDFMFGQPGCLKQ 153 (297)
T ss_dssp TTTCCGGGGTTSCCSTT-SEEEEECC---------SCCCHHHHHHTTHHHHC------SSCEEEECTTEEEESSSCHHHH
T ss_pred hccchhhhhhhcccCCC-ceEEEeCC---------CCCChHHHHHHHHHHcC------CCcEEEEeCCeecCCChHHHHH
Confidence 0000 0111 13333211 13699999999998885 37999999999887 45899
Q ss_pred HHHHHHHcCCcEEEEEEEcCCCcCCcccEEEECC--CC--CeEEEEEcCCcccccccccccccccccccccccccceeee
Q 014953 148 FVQNHRQSGADITISCLPMDDSRASDFGLMKINN--EG--RVLSFSEKPKGKDLKAMAVDTTVLGLSKQEAEEKPYIASM 223 (415)
Q Consensus 148 ~l~~h~~~~~~~ti~~~~~~~~~~~~~g~v~~d~--~~--~v~~~~ek~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 223 (415)
+++.|++.++ .++++.+.+...+..||++..++ ++ +|..|.|||..... .++++++
T Consensus 154 l~~~~~~~~~-~~i~~~~~~~~~~~~yg~v~~~~~~~~~~~v~~~~ekp~~~~~-------------------~~~~~~~ 213 (297)
T 2ux8_A 154 MVDAYNKVGG-NLICAEEVPDDQTHRYGIITPGTQDGVLTEVKGLVEKPAPGTA-------------------PSNLSVI 213 (297)
T ss_dssp HHHHHHHHCS-EEEEEC-----------CCCCCCBCSSEEEC---------------------------------CCCEE
T ss_pred HHHHHHhcCC-CEEEEEecCcccCCCCCeEEecccCCCceeEEEEEECCCCCCC-------------------CccEEEE
Confidence 9999988775 56766665433357798887663 45 89999999863211 1367899
Q ss_pred eEEEEeHHHHHHHHhhhCCC--CCcccccchhhhcccceEEEEEeCceEEecCCHHHHHHHHHhhcCCC
Q 014953 224 GVYLFKKEILLNLLRWRFPT--ANDFGSEIIPASANEQFLKAYLFNDYWEDIGTIRSFFEANLALTAHP 290 (415)
Q Consensus 224 Giyi~~~~~l~~~l~~~~~~--~~~~~~~~l~~l~~~~~i~~~~~~g~~~di~t~~~y~~an~~~l~~~ 290 (415)
|+|+|++++|. .++...+. ......++++.++++++++++.++++|.|||||++|.+|++.++...
T Consensus 214 Giyi~~~~~l~-~l~~~~~~~~~~~~l~d~i~~l~~~~~v~~~~~~~~w~dIgt~~dl~~a~~~~~~~~ 281 (297)
T 2ux8_A 214 GRYILQPEVMR-ILENQGKGAGGEIQLTDAMQRMIGDQPFHGVTFQGTRYDCGDKAGFIQANLAVALSR 281 (297)
T ss_dssp EEEEECTHHHH-HHHHTC--------CCTTGGGGTTTSCEEEEECSSEEEETTSHHHHHHHHHHHHHHC
T ss_pred EEEEECHHHHH-HHHhhCCCCCCeeEHHHHHHHHHhcCCEEEEEecceEEeCCCHHHHHHHHHHHHhcC
Confidence 99999999875 44443221 11224678888888889999999999999999999999998877543
No 13
>3pnn_A Conserved domain protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; HET: MSE GOL; 1.90A {Porphyromonas gingivalis}
Probab=100.00 E-value=2.3e-33 Score=263.62 Aligned_cols=256 Identities=13% Similarity=0.157 Sum_probs=186.9
Q ss_pred cccceEEEEEcCCCCCcccccccCCcccceee--CCcceeehhehhhhhccCCcEEEEEcccCh-hHHHHHHHhhccCCC
Q 014953 5 DARTVAAVILGGGAGTRLYPLTKQRAKPAVPI--GGAYRLIDVPMSNCINSGINKVYILTQYNS-ASLNRHLARAYNYGS 81 (415)
Q Consensus 5 ~~~~~~aVILAaG~g~Rl~plt~~~pK~llpv--~g~~pli~~~l~~l~~~gi~~I~vv~~~~~-~~i~~~l~~~~~~~~ 81 (415)
+|++|+|||||||.|+||+| ||+|+|+ +|+ |||+|+++++.++|+++|+|++++.. +.+.+|+...+..+.
T Consensus 2 ~~m~~~~vIlAaG~g~R~~~-----~K~l~~ig~~g~-pli~~~l~~~~~~~~~~i~vv~~~~~~~~~~~~~~~~~~~~~ 75 (303)
T 3pnn_A 2 NAMKPTLFVLAAGMGSRYGS-----LKQLDGIGPGGD-TIMDYSVYDAIRAGFGRLVFVIRHSFEKEFREKILTKYEGRI 75 (303)
T ss_dssp -CCCCEEEEECTTCBCTTSS-----BCCCCCCSTTSC-CHHHHHHHHHHHHTCCEEEEEECGGGHHHHHHHTHHHHTTTS
T ss_pred CCCceEEEEECCCCcccCCC-----CceEeEcCCCCe-eHHHHHHHHHHHCCCCeEEEEcCchHHHHHHHHHHHHhccCC
Confidence 46678999999999999997 7999999 599 99999999999999999999999995 889999875442211
Q ss_pred CcccCCceEEEecCccC------CCCCCCccccchHHHHHHhhhhhcCCCCCCcCeEEEEcCCeecccC-hHHHHHHHHH
Q 014953 82 GVTFGDGCVEVLAATQT------PGEAGKRWFQGTADAVRQFHWLFEDPRNKVIEDVLILSGDHLYRMD-YMDFVQNHRQ 154 (415)
Q Consensus 82 ~~~~~~~~v~i~~~~~~------~~~~~~~~~~Gt~~al~~~~~~i~~~~~~~~~~~lv~~gD~i~~~~-l~~~l~~h~~ 154 (415)
. +.++..... ........++||++|++.+++++ .++|+|++||.+++.+ +.+++++|.+
T Consensus 76 ------~-i~~~~~~~~~~~~~~~~~~~~~~~~Gt~~al~~a~~~i-------~~~~lV~~gD~l~~~~~~~~l~~~~~~ 141 (303)
T 3pnn_A 76 ------P-VELVFQELDRLPEGFSCPEGREKPWGTNHAVLMGRDAI-------REPFAVINADDFYGRNGFEVLARKLMT 141 (303)
T ss_dssp ------C-EEEEECCTTCCCTTCCCCTTCCSCCCHHHHHHTTTTTC-------CSCEEEEESSCBCCHHHHHHHHHHHHT
T ss_pred ------c-EEEEecccccccccccccccccccCCcHHHHHHHHHhc-------CCCEEEEECCeecCHHHHHHHHHHHHH
Confidence 1 222211100 00000012479999999999887 3789999999999887 8999999986
Q ss_pred ---cCCcEEEEEEEcCCCcCCcc-----cEEEECCCCCeEEEEEcCCcccccc-ccccccccccccccc----cccccee
Q 014953 155 ---SGADITISCLPMDDSRASDF-----GLMKINNEGRVLSFSEKPKGKDLKA-MAVDTTVLGLSKQEA----EEKPYIA 221 (415)
Q Consensus 155 ---~~~~~ti~~~~~~~~~~~~~-----g~v~~d~~~~v~~~~ek~~~~~~~~-~~~~~~~~~~~~~~~----~~~~~l~ 221 (415)
.++++++++.+.+++ .++| |++.+|++|+|+.|.|||....... ... ...+. ...++++
T Consensus 142 ~~~~~~~~~v~~~~~~~~-~~~~g~~~~G~v~~d~~g~v~~i~Ekp~~~~~~~~~~~-------~~~~g~~~~~~~~~~i 213 (303)
T 3pnn_A 142 LEGKQGEYCMVGYRVGNT-LSESGGVSRGVCQVDEKHLLTGVVERTGIERTDGTISF-------RDETGKICTLAEDAPV 213 (303)
T ss_dssp TTTCSSEEEEEEEEGGGS-CBTTBCEEEEEEEECTTSBEEEEEEEEEEEEETTEEEE-------ECTTSCEEEECTTCEE
T ss_pred hccccCceEEEEEECCCc-cCccCceeeeeEeeCCCCcEEEEEECCCCccccccccc-------cccccccccCCCCCEE
Confidence 567899998887652 1455 6888988899999999987531000 000 00000 0125789
Q ss_pred eeeEEEEeHHHHHHHHhh-------hC--CCCCcccccchhhhcccc--eEEEEEeCceEEecCCHHHHHHHHHhhcC
Q 014953 222 SMGVYLFKKEILLNLLRW-------RF--PTANDFGSEIIPASANEQ--FLKAYLFNDYWEDIGTIRSFFEANLALTA 288 (415)
Q Consensus 222 ~~Giyi~~~~~l~~~l~~-------~~--~~~~~~~~~~l~~l~~~~--~i~~~~~~g~~~di~t~~~y~~an~~~l~ 288 (415)
++|+|+|++++|..+.+. .. .....+..++++.+++.+ ++.+|.++|+|.|||||++|.+|++.+.+
T Consensus 214 ~~GiY~f~~~~~~~l~~~~~~~l~~~~~~~~~e~~l~d~i~~li~~g~~~v~~~~~~g~w~dIgt~~dl~~a~~~l~~ 291 (303)
T 3pnn_A 214 SMNMWGFTPDYFDYSEELFINFLNAHGQEPKSEFFIPFVVNDLIRSGRASVEVLDTTARWFGVTYSDDRPGVVAKLRE 291 (303)
T ss_dssp EEEEEEECTHHHHHHHHHHHHHHHHHTTCSSCCCCHHHHHHHHHHHTSCEEEEEECSCCCBCCSSGGGHHHHHHHHHH
T ss_pred EEEEEEECHHHHHHHHHHHHHHHHhcCCCcCCcEEhHHHHHHHHHcCCCcEEEEEeCCceECCCCHHHHHHHHHHHHH
Confidence 999999999998644320 11 112234567888888776 79999999999999999999999987754
No 14
>2pa4_A UTP-glucose-1-phosphate uridylyltransferase; phosphorylase, nucleotidyltransferase, metabolism; HET: GUD; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=100.00 E-value=9.3e-33 Score=262.04 Aligned_cols=248 Identities=20% Similarity=0.250 Sum_probs=185.3
Q ss_pred cceEEEEEcCCCCCcccccccCCcccceeeCCcceeehhehhhhhccCCcEEEEEcccChhHHHHHHHhhccCC-----C
Q 014953 7 RTVAAVILGGGAGTRLYPLTKQRAKPAVPIGGAYRLIDVPMSNCINSGINKVYILTQYNSASLNRHLARAYNYG-----S 81 (415)
Q Consensus 7 ~~~~aVILAaG~g~Rl~plt~~~pK~llpv~g~~pli~~~l~~l~~~gi~~I~vv~~~~~~~i~~~l~~~~~~~-----~ 81 (415)
+.|+|||||||.|+||+|+|..+||+|+||+|+ |||+|+++++.++|+++|+|++++..+++.+|+...+.+. .
T Consensus 11 ~~~~aVIlAaG~gtRl~plt~~~pK~ll~i~gk-pli~~~l~~l~~~gi~~iivv~~~~~~~i~~~~~~~~~~~~~l~~~ 89 (323)
T 2pa4_A 11 AVKTVVVPAAGLGTRFLPATKTVPKELLPVVDT-PGIELIAAEAAELGATRLAIITAPNKAGVLAHFERSSELEETLMER 89 (323)
T ss_dssp -CCEEEEECCCCCGGGTTGGGTSCGGGCEETTE-EHHHHHHHHHHHTTCCEEEEEECTTCHHHHHTTSCCHHHHHHHHHT
T ss_pred cceEEEEECCCCccccCccccCCCceeeeECCE-EHHHHHHHHHHhCCCCEEEEEecCcHHHHHHHHhccchhhhhhhcc
Confidence 458999999999999999999999999999999 9999999999999999999999998888887764211000 0
Q ss_pred C--------cc--cCCceEEEecCccCCCCCCCccccchHHHHHHhhhhhcCCCCCCcCeEEEEcCCeecc--cChHHHH
Q 014953 82 G--------VT--FGDGCVEVLAATQTPGEAGKRWFQGTADAVRQFHWLFEDPRNKVIEDVLILSGDHLYR--MDYMDFV 149 (415)
Q Consensus 82 ~--------~~--~~~~~v~i~~~~~~~~~~~~~~~~Gt~~al~~~~~~i~~~~~~~~~~~lv~~gD~i~~--~~l~~~l 149 (415)
+ .. ++. .+.++. +. +..||+++++.++.++.+ ..+.|+|++||++++ .++..++
T Consensus 90 ~~~~~~~~~~~~~~g~-~i~~~~--~~-------~~~Gt~~al~~a~~~l~~----~~d~~lv~~~D~~~~~~~~l~~l~ 155 (323)
T 2pa4_A 90 GKTDQVEIIRRAADLI-KAVPVT--QD-------KPLGLGHAVGLAESVLDD----DEDVVAVMLPDDLVLPTGVMERMA 155 (323)
T ss_dssp TCHHHHHHTTHHHHHC-EEEEEE--CS-------SCCCHHHHHHTTGGGSCS----SCCEEEEECTTEEEESSCHHHHHH
T ss_pred chhhhhhhhhccccCc-ceEEEe--CC-------ccCCcHHHHHHHHHHhcC----CCCeEEEEeCCcccCchHHHHHHH
Confidence 0 00 111 133332 11 136999999999988752 023499999999887 4589999
Q ss_pred HHHHHcCCcEEEEEEEcCCCcCCcccEEEEC----CCC--CeEEEEEcCCcccccccccccccccccccccccccceeee
Q 014953 150 QNHRQSGADITISCLPMDDSRASDFGLMKIN----NEG--RVLSFSEKPKGKDLKAMAVDTTVLGLSKQEAEEKPYIASM 223 (415)
Q Consensus 150 ~~h~~~~~~~ti~~~~~~~~~~~~~g~v~~d----~~~--~v~~~~ek~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 223 (415)
+.|.+.++ .++++.+.+...+..||.+..| +++ +|..|.|||..... .+++.++
T Consensus 156 ~~~~~~~~-~~i~~~~~~~~~~~~yg~v~~d~~~~~~~~~~V~~~~Ekp~~~~~-------------------~~~~~~~ 215 (323)
T 2pa4_A 156 QVRAEFGG-SVLCAVEVSEADVSKYGIFEIEADTKDSDVKKVKGMVEKPAIEDA-------------------PSRLAAT 215 (323)
T ss_dssp HHHHTTCS-EEEEEEECCGGGGGGSEEEEEEECCSSTTEEEEEEEEESCCTTTC-------------------SCSEEEE
T ss_pred HHHHhcCC-cEEEEEEecccccCCccEEEeCCcccCCCceeEEEEEECCCCccc-------------------cccEEEE
Confidence 99987765 5677766654346789998876 454 89999999864221 2468899
Q ss_pred eEEEEeHHHHHHHHhhhCCC--CCcccccchhhhccc-ceEEEEEeCceEEecCCHHHHHHHHHhhcCCC
Q 014953 224 GVYLFKKEILLNLLRWRFPT--ANDFGSEIIPASANE-QFLKAYLFNDYWEDIGTIRSFFEANLALTAHP 290 (415)
Q Consensus 224 Giyi~~~~~l~~~l~~~~~~--~~~~~~~~l~~l~~~-~~i~~~~~~g~~~di~t~~~y~~an~~~l~~~ 290 (415)
|+|+|++++|. .++...+. ......++++.+++. .++.++.++++|.|||||+||.+|++.++...
T Consensus 216 GiY~~~~~~~~-~l~~~~~~~~ge~~l~d~i~~l~~~g~~v~~~~~~g~w~DIgt~~dl~~a~~~~~~~~ 284 (323)
T 2pa4_A 216 GRYLLDRKIFD-ALRRITPGAGGELQLTDAIDLLIDEGHPVHIVIHQGKRHDLGNPGGYIPACVDFGLSH 284 (323)
T ss_dssp EEEEEETHHHH-HHHHCCCCGGGCCCHHHHHHHHHHTTCCEEEEECCSEEEECSSHHHHHHHHHHHHHTC
T ss_pred EEEEECHHHHH-HHHhhCCCCCCeEeHHHHHHHHHHcCCCEEEEEeCCeEEeCCCHHHHHHHHHHHhhcC
Confidence 99999999885 44443222 111225778887775 78999999999999999999999998877544
No 15
>1fxo_A Glucose-1-phosphate thymidylyltransferase; rhamnose, nucleotidyltransferase, pyrophosphorylase, allostery; HET: TMP; 1.66A {Pseudomonas aeruginosa} SCOP: c.68.1.6 PDB: 1fzw_A 1g0r_A* 1g1l_A* 1g23_A* 1g2v_A* 1g3l_A* 1h5r_A* 1h5s_C* 1h5t_A* 1h5s_D* 1h5s_A* 1h5r_B* 1h5s_B* 1h5t_B* 1iim_A* 1iin_A* 3pkp_A* 3pkq_A* 1mp5_A* 1mp3_A* ...
Probab=100.00 E-value=5.1e-32 Score=252.97 Aligned_cols=233 Identities=23% Similarity=0.382 Sum_probs=183.2
Q ss_pred ceEEEEEcCCCCCcccccccCCcccceeeCCcceeehhehhhhhccCCcEEEEEcc-cChhHHHHHHHhhccCCCCcccC
Q 014953 8 TVAAVILGGGAGTRLYPLTKQRAKPAVPIGGAYRLIDVPMSNCINSGINKVYILTQ-YNSASLNRHLARAYNYGSGVTFG 86 (415)
Q Consensus 8 ~~~aVILAaG~g~Rl~plt~~~pK~llpv~g~~pli~~~l~~l~~~gi~~I~vv~~-~~~~~i~~~l~~~~~~~~~~~~~ 86 (415)
+|+|||||||.||||+|+|...||+|+||+|+ |||+|+++.|..+|+++|+|+++ ++.+.+.+++.+ +..|+
T Consensus 2 ~~~aIILAgG~gtRl~plT~~~pK~llpi~gk-pli~~~l~~l~~~gi~~I~vv~~~~~~~~i~~~l~~------g~~~g 74 (293)
T 1fxo_A 2 KRKGIILAGGSGTRLHPATLAISKQLLPVYDK-PMIYYPLSTLMLAGIREILIISTPQDTPRFQQLLGD------GSNWG 74 (293)
T ss_dssp CEEEEEECCCCCTTTTTHHHHSCGGGSEETTE-ETTHHHHHHHHHTTCCEEEEEECTTTHHHHHHHHTT------SGGGT
T ss_pred CceEEEECCCCCCcCccccCCCCceeCeECCE-eHHHHHHHHHHHCCCCEEEEEeccccHHHHHHHHhc------ccccC
Confidence 58999999999999999999999999999999 99999999999999999998774 556777777643 22343
Q ss_pred CceEEEecCccCCCCCCCccccchHHHHHHhhhhhcCCCCCCcCeEEEEcCCee-cccChHHHHHHHHHcCCcEEEEEEE
Q 014953 87 DGCVEVLAATQTPGEAGKRWFQGTADAVRQFHWLFEDPRNKVIEDVLILSGDHL-YRMDYMDFVQNHRQSGADITISCLP 165 (415)
Q Consensus 87 ~~~v~i~~~~~~~~~~~~~~~~Gt~~al~~~~~~i~~~~~~~~~~~lv~~gD~i-~~~~l~~~l~~h~~~~~~~ti~~~~ 165 (415)
.. +.+.. +. .+.|++++++.+.+++. .++++++.||.+ .+.++.++++.|.+.+.+++++..+
T Consensus 75 ~~-i~~~~--~~-------~~~G~~~al~~a~~~i~------~~~~~lv~gD~~~~~~~l~~~l~~~~~~~~~~~v~~~~ 138 (293)
T 1fxo_A 75 LD-LQYAV--QP-------SPDGLAQAFLIGESFIG------NDLSALVLGDNLYYGHDFHELLGSASQRQTGASVFAYH 138 (293)
T ss_dssp CE-EEEEE--CS-------SCCCGGGHHHHTHHHHT------TSEEEEEETTEEEECTTHHHHHHHHHTCCSSEEEEEEE
T ss_pred ce-EEEee--CC-------CCCCHHHHHHHHHHHhC------CCCEEEEECChhccCccHHHHHHHHHhcCCCcEEEEEE
Confidence 22 22222 21 13699999999999885 378999999985 4668999999998777778888777
Q ss_pred cCCCcCCcccEEEECCCCCeEEEEEcCCcccccccccccccccccccccccccceeeeeEEEEeHHHHHHHHhhhCCC-C
Q 014953 166 MDDSRASDFGLMKINNEGRVLSFSEKPKGKDLKAMAVDTTVLGLSKQEAEEKPYIASMGVYLFKKEILLNLLRWRFPT-A 244 (415)
Q Consensus 166 ~~~~~~~~~g~v~~d~~~~v~~~~ek~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Giyi~~~~~l~~~l~~~~~~-~ 244 (415)
..+ +.+||++..|++|++..|.|||..+. +++.++|+|+|+++++..+ ....+. .
T Consensus 139 v~d--p~~~g~v~~d~~g~v~~~~ekp~~~~---------------------s~~~~~Giy~~~~~~l~~~-~~~~~~~~ 194 (293)
T 1fxo_A 139 VLD--PERYGVVEFDQGGKAISLEEKPLEPK---------------------SNYAVTGLYFYDQQVVDIA-RDLKPSPR 194 (293)
T ss_dssp CSC--GGGSEEEEECTTSCEEEEEESCSSCS---------------------SSEEEEEEEEECTTHHHHH-HHCCCCTT
T ss_pred CCC--cccCcEEEECCCCcEEEEEECCCCCC---------------------CCeEEEEEEEEcHHHHHHH-HhcCcccC
Confidence 766 56899999998999999999986432 3688999999999998643 332221 1
Q ss_pred Cc-ccccchhhhcccceEEEEEeC-ce-EEecCCHHHHHHHHHhhc
Q 014953 245 ND-FGSEIIPASANEQFLKAYLFN-DY-WEDIGTIRSFFEANLALT 287 (415)
Q Consensus 245 ~~-~~~~~l~~l~~~~~i~~~~~~-g~-~~di~t~~~y~~an~~~l 287 (415)
.. ...++++.+++.+++.++... ++ |.||||++||.+|+..+.
T Consensus 195 ge~~~td~~~~~l~~g~~~v~~~~~g~~w~Digt~edl~~a~~~~~ 240 (293)
T 1fxo_A 195 GELEITDVNRAYLERGQLSVEIMGRGYAWLDTGTHDSLLEAGQFIA 240 (293)
T ss_dssp SSCCHHHHHHHHHHTTCEEEEECCTTSEEEECCSHHHHHHHHHHHH
T ss_pred CceeHHHHHHHHHhcCCeEEEEeCCCCEEEcCCCHHHHHHHHHHHH
Confidence 11 235677777777888888875 75 999999999999998764
No 16
>4evw_A Nucleoside-diphosphate-sugar pyrophosphorylase; structural genomics, PSI-biology; HET: MSE; 1.90A {Vibrio cholerae}
Probab=100.00 E-value=1.2e-32 Score=252.23 Aligned_cols=228 Identities=13% Similarity=0.104 Sum_probs=170.1
Q ss_pred EEEEcCCCCCcccccccCCcccceeeCCcceeehhehhhhhc-cCCcEEEEEcccChhHHHHHHHhhccCCCCcccCCce
Q 014953 11 AVILGGGAGTRLYPLTKQRAKPAVPIGGAYRLIDVPMSNCIN-SGINKVYILTQYNSASLNRHLARAYNYGSGVTFGDGC 89 (415)
Q Consensus 11 aVILAaG~g~Rl~plt~~~pK~llpv~g~~pli~~~l~~l~~-~gi~~I~vv~~~~~~~i~~~l~~~~~~~~~~~~~~~~ 89 (415)
+||||||.||||+|+|.++||+|+||+|+ |||+|+++++.+ +|+++|++++++..+ +.+++.+... .++...
T Consensus 2 ~iIlAaG~GtRl~plt~~~PK~llpv~gk-pli~~~l~~l~~~~gi~~iivv~~~~~~-~~~~~~~~~~-----~~~~~~ 74 (255)
T 4evw_A 2 IVIPMAGMSSRFFKAGYTQPKYMLEAHGQ-TLFEHSVNSFAAYFASTPFLFIVRNVYD-TAVFVREKAT-----QLGIKQ 74 (255)
T ss_dssp EEEECCSCCHHHHHTTCCSCGGGCEETTE-EHHHHHHGGGGGGTTTSCEEEEEESSTT-HHHHHHHHHH-----HHTCSS
T ss_pred EEEEcCCCCcccccCCCCCCccccEECCe-EHHHHHHHHHhccCCCceEEEEECchhh-hHHHHHHHHH-----HcCCCC
Confidence 89999999999999999999999999999 999999999999 799999999998876 5555544321 111111
Q ss_pred --EEEecCccCCCCCCCccccchHHHHHHhhhhhcCCCCCCcCeEEEEcCCeec-ccChHHHHHHHHHcCCcEEEEEEEc
Q 014953 90 --VEVLAATQTPGEAGKRWFQGTADAVRQFHWLFEDPRNKVIEDVLILSGDHLY-RMDYMDFVQNHRQSGADITISCLPM 166 (415)
Q Consensus 90 --v~i~~~~~~~~~~~~~~~~Gt~~al~~~~~~i~~~~~~~~~~~lv~~gD~i~-~~~l~~~l~~h~~~~~~~ti~~~~~ 166 (415)
+.+++ . +.+||++|++.+++++........++|+|++||+++ +.++.++ ..+++.++++.+.
T Consensus 75 ~~~~~~~---~-------~~~Gt~~av~~a~~~l~~~~~~~~~~~lV~~gD~l~~~~~~~~~-----~~~~~~~i~~~~~ 139 (255)
T 4evw_A 75 FYIAELH---T-------ETRGQAETVTLGLEELAKQGVDYQGSITVFNIDTFRPNFVFPDI-----SQHSDGYLEVFQG 139 (255)
T ss_dssp EEEEEES---S-------CCSSHHHHHHHHHHHHHHTTCCCCSCEEECCTTEECTTCCCCGG-----GGSSSEEEEEEEC
T ss_pred ceEEEeC---C-------CCCCHHHHHHHHHHHHhhcccCCCCcEEEEeCCEEEecchhHHH-----hhcCCcEEEEEec
Confidence 22221 1 136999999999999820000014789999999988 5556543 2566788988888
Q ss_pred CCCcCCcccEEEECCCC--CeEEEEEcCCcccccccccccccccccccccccccceeeeeEEEEeHH-HHHHHHhh----
Q 014953 167 DDSRASDFGLMKINNEG--RVLSFSEKPKGKDLKAMAVDTTVLGLSKQEAEEKPYIASMGVYLFKKE-ILLNLLRW---- 239 (415)
Q Consensus 167 ~~~~~~~~g~v~~d~~~--~v~~~~ek~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Giyi~~~~-~l~~~l~~---- 239 (415)
++ + .||++..|++| +|+++.||+.. ++++++|+|+|++. .|...+.+
T Consensus 140 ~~--p-~yG~v~~d~~g~~~V~~i~EK~~~-----------------------s~~~~~GiY~f~~~~~~~~~l~~~i~~ 193 (255)
T 4evw_A 140 GG--D-NWSFAKPEHAGSTKVIQTAEKNPI-----------------------SDLCSTGLYHFNRKEDYLEAYREYVAR 193 (255)
T ss_dssp CS--S-CSCEEEESSTTCCBEEEEESSSCS-----------------------SSEEEEEEEEESCHHHHHHHHHHHHTS
T ss_pred CC--C-ceeEEEECCCCCeEEEEEEeccCc-----------------------cCcEEEeEEEECcHHHHHHHHHHHHhc
Confidence 65 3 89999999888 99999999432 36899999999985 33333322
Q ss_pred hCC---CCCcccccchhhhccc-ceEEEEEeC-ceEEecCCHHHHHHHHHhh
Q 014953 240 RFP---TANDFGSEIIPASANE-QFLKAYLFN-DYWEDIGTIRSFFEANLAL 286 (415)
Q Consensus 240 ~~~---~~~~~~~~~l~~l~~~-~~i~~~~~~-g~~~di~t~~~y~~an~~~ 286 (415)
..+ ....+..|+++.+++. .++.++.++ ++|.|+|||++|.++...-
T Consensus 194 ~~~~~~~gE~~ltd~i~~li~~g~~v~~~~~~~~~w~digt~~~l~~~~~~~ 245 (255)
T 4evw_A 194 PSQEWERGELYIAPLYNELIQKGLNIHYHLIARHEVIFCGVPDEYTDFLRQP 245 (255)
T ss_dssp CGGGCSCSCCCSTTHHHHHHHTTCCEEEEECCGGGCEECCSHHHHHHHHHC-
T ss_pred ccccccCCeEehHHHHHHHHHCCCEEEEEEeccccEEECCCHHHHHHHHhcC
Confidence 111 2334567888888765 579999986 9999999999999997643
No 17
>1lvw_A Glucose-1-phosphate thymidylyltransferase; protein nucleotide complex, nucleotide binding fold; HET: TYD; 1.70A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.68.1.6
Probab=100.00 E-value=1.1e-31 Score=250.76 Aligned_cols=233 Identities=24% Similarity=0.381 Sum_probs=182.6
Q ss_pred ceEEEEEcCCCCCcccccccCCcccceeeCCcceeehhehhhhhccCCcEEEEEcc-cChhHHHHHHHhhccCCCCcccC
Q 014953 8 TVAAVILGGGAGTRLYPLTKQRAKPAVPIGGAYRLIDVPMSNCINSGINKVYILTQ-YNSASLNRHLARAYNYGSGVTFG 86 (415)
Q Consensus 8 ~~~aVILAaG~g~Rl~plt~~~pK~llpv~g~~pli~~~l~~l~~~gi~~I~vv~~-~~~~~i~~~l~~~~~~~~~~~~~ 86 (415)
.|+|||||||.||||+|+|..+||+|+||+|+ |||+|+++.|..+|+++|+|+++ ++.+.+.+++.+ +..|+
T Consensus 3 ~m~aIILAgG~GtRl~plT~~~pK~llpi~gk-pli~~~l~~l~~~gi~~Iivv~~~~~~~~i~~~l~~------g~~~g 75 (295)
T 1lvw_A 3 HMKGIVLAGGSGTRLYPITRAVSKQLLPIYDK-PMIYYPLSVLMLAGIRDILIISTPRDLPLYRDLLGD------GSQFG 75 (295)
T ss_dssp SCEEEEECCCCCSTTTTTTTSSCGGGSEETTE-ETTHHHHHHHHHTTCCEEEEEECTTTHHHHHHHHTT------SGGGT
T ss_pred ceEEEEECCCCCCccccccCCCCceecEECCe-eHHHHHHHHHHHCCCCeEEEEeccchHHHHHHHhhh------ccccC
Confidence 48999999999999999999999999999999 99999999999999999999886 566777777743 22343
Q ss_pred CceEEEecCccCCCCCCCccccchHHHHHHhhhhhcCCCCCCcCeEEEEcCCee-cccChHHHHHHHHHcCCcEEEEEEE
Q 014953 87 DGCVEVLAATQTPGEAGKRWFQGTADAVRQFHWLFEDPRNKVIEDVLILSGDHL-YRMDYMDFVQNHRQSGADITISCLP 165 (415)
Q Consensus 87 ~~~v~i~~~~~~~~~~~~~~~~Gt~~al~~~~~~i~~~~~~~~~~~lv~~gD~i-~~~~l~~~l~~h~~~~~~~ti~~~~ 165 (415)
.. +.++. +. .+.|++++++.+.+++. .++++++.||.+ .+.++.++++.|.+.+..++++..+
T Consensus 76 ~~-i~~~~--~~-------~~~G~~~al~~a~~~i~------~~~~~lv~gD~~~~~~~l~~~l~~~~~~~~~~~v~~~~ 139 (295)
T 1lvw_A 76 VR-FSYRV--QE-------EPRGIADAFIVGKDFIG------DSKVALVLGDNVFYGHRFSEILRRAASLEDGAVIFGYY 139 (295)
T ss_dssp SE-EEEEE--CS-------SCCCGGGHHHHTHHHHT------TSCEEEEETTCCEECTTHHHHHHHHHTCCSSEEEEEEE
T ss_pred ce-EEEee--CC-------CCCChHHHHHHHHHHhC------CCcEEEEECCccccCcCHHHHHHHHHHcCCCcEEEEEE
Confidence 22 22222 21 13699999999999885 367888889985 4678999999998777778888877
Q ss_pred cCCCcCCcccEEEECCCCCeEEEEEcCCcccccccccccccccccccccccccceeeeeEEEEeHHHHHHHHhhhCCC-C
Q 014953 166 MDDSRASDFGLMKINNEGRVLSFSEKPKGKDLKAMAVDTTVLGLSKQEAEEKPYIASMGVYLFKKEILLNLLRWRFPT-A 244 (415)
Q Consensus 166 ~~~~~~~~~g~v~~d~~~~v~~~~ek~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Giyi~~~~~l~~~l~~~~~~-~ 244 (415)
..+ +.+|+++..|++++|..|.|||..+. +++.++|+|+|+++++..+ ....+. .
T Consensus 140 v~d--p~~~g~v~~d~~g~v~~~~ekp~~~~---------------------s~~~~~Giy~f~~~~l~~~-~~~~~~~~ 195 (295)
T 1lvw_A 140 VRD--PRPFGVVEFDSEGRVISIEEKPSRPK---------------------SNYVVPGLYFYDNQVVEIA-RRIEPSDR 195 (295)
T ss_dssp CSC--CTTSEEEEECTTSBEEEEEESCSSCS---------------------CSEECCSEEEECTTHHHHH-HHCCCCTT
T ss_pred CCC--cccCCEEEECCCCcEEEEEECCCCCC---------------------CCEEEEEeEEEcHHHHHHH-HhcCCccc
Confidence 766 56899999998999999999986432 3578999999999998643 332221 1
Q ss_pred Cc-ccccchhhhcccceEEEEEeC-ce-EEecCCHHHHHHHHHhhc
Q 014953 245 ND-FGSEIIPASANEQFLKAYLFN-DY-WEDIGTIRSFFEANLALT 287 (415)
Q Consensus 245 ~~-~~~~~l~~l~~~~~i~~~~~~-g~-~~di~t~~~y~~an~~~l 287 (415)
.. ...++++.+++.+++.++.+. ++ |.||||++||.+|+..+.
T Consensus 196 ge~~~td~~~~~l~~g~~~v~~~~~g~~w~Digt~edl~~a~~~~~ 241 (295)
T 1lvw_A 196 GELEITSVNEEYLRMGKLRVELMGRGMAWLDTGTHDGLLEASSFIE 241 (295)
T ss_dssp SCCCHHHHHHHHHHTTCEEEEEECTTCEECCCSSHHHHHHHHHHHH
T ss_pred CceeHHHHHHHHHHcCCcEEEEeCCCCeEEeCCCHHHHHHHHHHHH
Confidence 11 135667777777788888775 75 999999999999998664
No 18
>1mc3_A Glucose-1-phosphate thymidylyltransferase; glucose-1-phosphate thymidylytransferase, RFFH; HET: TTP; 2.60A {Escherichia coli} SCOP: c.68.1.6
Probab=100.00 E-value=5.6e-32 Score=252.75 Aligned_cols=233 Identities=24% Similarity=0.371 Sum_probs=182.4
Q ss_pred ceEEEEEcCCCCCcccccccCCcccceeeCCcceeehhehhhhhccCCcEEEEEcc-cChhHHHHHHHhhccCCCCcccC
Q 014953 8 TVAAVILGGGAGTRLYPLTKQRAKPAVPIGGAYRLIDVPMSNCINSGINKVYILTQ-YNSASLNRHLARAYNYGSGVTFG 86 (415)
Q Consensus 8 ~~~aVILAaG~g~Rl~plt~~~pK~llpv~g~~pli~~~l~~l~~~gi~~I~vv~~-~~~~~i~~~l~~~~~~~~~~~~~ 86 (415)
.|+|||||||.||||+|+|...||+|+||+|+ |||+|+++.|..+|+++|+|+++ ++.+.+.+++.+ +..|+
T Consensus 3 ~m~aIILAgG~GtRl~plT~~~pK~llpi~gk-pli~~~l~~l~~~gi~~I~vv~~~~~~~~i~~~l~~------g~~~g 75 (296)
T 1mc3_A 3 HMKGIILAGGSGTRLHPITRGVSKQLLPIYDK-PMIYYPLSVLMLAGIREILIITTPEDKGYFQRLLGD------GSEFG 75 (296)
T ss_dssp CCEEEEECCCCCGGGHHHHTTSCGGGSEETTE-ETTHHHHHHHHHTTCCEEEEEECTTTHHHHHHHHTT------SGGGT
T ss_pred ccEEEEECCCCCCcCCcccCCCCceeeEECCe-eHHHHHHHHHHhCCCCcEEEEechhHHHHHHHHHhc------ccccC
Confidence 48999999999999999999999999999999 99999999999999999999886 566777777643 22343
Q ss_pred CceEEEecCccCCCCCCCccccchHHHHHHhhhhhcCCCCCCcCeEEEEcCCee-cccChHHHHHHHHHcCCcEEEEEEE
Q 014953 87 DGCVEVLAATQTPGEAGKRWFQGTADAVRQFHWLFEDPRNKVIEDVLILSGDHL-YRMDYMDFVQNHRQSGADITISCLP 165 (415)
Q Consensus 87 ~~~v~i~~~~~~~~~~~~~~~~Gt~~al~~~~~~i~~~~~~~~~~~lv~~gD~i-~~~~l~~~l~~h~~~~~~~ti~~~~ 165 (415)
.. +.++. +. .+.|++++++.+..++. .++++++.||.+ .+.++.++++.|.+.+..++++..+
T Consensus 76 ~~-i~~~~--~~-------~~~G~~~al~~a~~~i~------~~~~~lv~gD~~~~~~~l~~~l~~~~~~~~~~~v~~~~ 139 (296)
T 1mc3_A 76 IQ-LEYAE--QP-------SPDGLAQAFIIGETFLN------GEPSCLVLGDNIFFGQGFSPKLRHVAARTEGATVFGYQ 139 (296)
T ss_dssp CE-EEEEE--CS-------SCCCSTHHHHHTHHHHT------TSCEEEEETTEEEECSSCHHHHHHHTTCCSSEEEEEEE
T ss_pred ce-EEEec--cC-------CCCCHHHHHHHHHHHhC------CCCEEEEECCccccccCHHHHHHHHHHcCCCCEEEEEE
Confidence 22 22222 21 13699999999999885 367888889984 4677999999998777778888877
Q ss_pred cCCCcCCcccEEEECCCCCeEEEEEcCCcccccccccccccccccccccccccceeeeeEEEEeHHHHHHHHhhhCCC-C
Q 014953 166 MDDSRASDFGLMKINNEGRVLSFSEKPKGKDLKAMAVDTTVLGLSKQEAEEKPYIASMGVYLFKKEILLNLLRWRFPT-A 244 (415)
Q Consensus 166 ~~~~~~~~~g~v~~d~~~~v~~~~ek~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Giyi~~~~~l~~~l~~~~~~-~ 244 (415)
..+ +..||++..|++|+|..|.|||..+. +++.++|+|+|+++++.. ++...+. .
T Consensus 140 v~d--p~~yg~v~~d~~g~v~~~~ekp~~~~---------------------s~~~~~Giy~~~~~~l~~-~~~~~~~~~ 195 (296)
T 1mc3_A 140 VMD--PERFGVVEFDDNFRAISLEEKPKQPK---------------------SNWAVTGLYFYDSKVVEY-AKQVKPSER 195 (296)
T ss_dssp CSC--CSSSBBCEEETTEEEEECCBSCSSCS---------------------CSEEEEEEEECCTHHHHH-HHSCCCCSS
T ss_pred CCC--cccCCEEEECCCCcEEEEEECCCCCC---------------------CCEEEEEEEEEcHHHHHH-HHhcCcccc
Confidence 766 56899999998899999999986432 367899999999999854 4432221 1
Q ss_pred Cc-ccccchhhhcccceEEEEEeC-ce-EEecCCHHHHHHHHHhhc
Q 014953 245 ND-FGSEIIPASANEQFLKAYLFN-DY-WEDIGTIRSFFEANLALT 287 (415)
Q Consensus 245 ~~-~~~~~l~~l~~~~~i~~~~~~-g~-~~di~t~~~y~~an~~~l 287 (415)
.. ...++++.+++.+++.++... ++ |.|+||+++|.+|+..+.
T Consensus 196 ge~~~td~~~~~l~~g~~~v~~~~~g~~w~Digt~edl~~a~~~~~ 241 (296)
T 1mc3_A 196 GELEITSINQMYLEAGNLTVELLGRGFAWLDTGTHDSLIEASTFVQ 241 (296)
T ss_dssp SSCCHHHHHHHHHHTTCEEEEECCTTCEEEECCSHHHHHHHHHHHH
T ss_pred CCccHHHHHHHHHhcCCeEEEEeCCCCEEEeCCCHHHHHHHHHHHH
Confidence 11 135667777777788888875 75 999999999999998765
No 19
>2qh5_A PMI, ALGA, mannose-6-phosphate isomerase; structural genomics, PSI, protein structure initi nysgrc; 2.30A {Helicobacter pylori}
Probab=99.97 E-value=6.3e-31 Score=247.74 Aligned_cols=241 Identities=18% Similarity=0.331 Sum_probs=153.3
Q ss_pred cceEEEEEcCCCCCccccccc-CCcccceee-CCcceeehhehhhhhccCCcEEEEEcccCh-hHHHHHHHhhccCCCCc
Q 014953 7 RTVAAVILGGGAGTRLYPLTK-QRAKPAVPI-GGAYRLIDVPMSNCINSGINKVYILTQYNS-ASLNRHLARAYNYGSGV 83 (415)
Q Consensus 7 ~~~~aVILAaG~g~Rl~plt~-~~pK~llpv-~g~~pli~~~l~~l~~~gi~~I~vv~~~~~-~~i~~~l~~~~~~~~~~ 83 (415)
++|+|||||||.|+||+|||. .+||+|+|| +|+ |||+|+++++.++ +++|+|++++.. +.+.+++...
T Consensus 3 ~~~~avIlAgG~gtRl~plt~~~~pK~ll~i~gg~-pli~~~l~~l~~~-~~~i~vv~~~~~~~~i~~~~~~~------- 73 (308)
T 2qh5_A 3 LKIKNILLSGGSGKRLWPLSRSLYPKQFLKLFDHK-SLFELSFKRNASL-VDETLIVCNEKHYFLALEEIKNE------- 73 (308)
T ss_dssp CCEEEEEECC-------------CCGGGCTTBTTB-CHHHHHHHHHHTT-CSEEEEEEEGGGHHHHHHHTTTT-------
T ss_pred CccEEEEEcCCCCccCCccCCCCCCCEEEECCCCC-CHHHHHHHHHHcc-CCCEEEEEChhHHHHHHHHHHHh-------
Confidence 358999999999999999996 899999999 599 9999999999999 999999999875 5666766421
Q ss_pred ccCCceEEEecCccCCCCCCCccccchHHHHHHhhhhhcCCCCCCcCeEEEEcCCeec-ccC-hHHHHHH---HHHcCCc
Q 014953 84 TFGDGCVEVLAATQTPGEAGKRWFQGTADAVRQFHWLFEDPRNKVIEDVLILSGDHLY-RMD-YMDFVQN---HRQSGAD 158 (415)
Q Consensus 84 ~~~~~~v~i~~~~~~~~~~~~~~~~Gt~~al~~~~~~i~~~~~~~~~~~lv~~gD~i~-~~~-l~~~l~~---h~~~~~~ 158 (415)
|+...+.++... .+.||+++++.+..++.. .+.|++++||+++ +.+ |.++++. |.+.++.
T Consensus 74 -~~~~~~~~i~~~---------~~~gt~~al~~a~~~l~~-----~~~~lv~~~D~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (308)
T 2qh5_A 74 -IKNKSVGFLLES---------LSKNTANAIALSALMSDK-----EDLLIVTPSDHLIKDLQAYENAIKKAIDLAQKGFL 138 (308)
T ss_dssp -CSSCEEEEEEES---------SCCCHHHHHHHHHHTSCT-----TSEEEEEESSCBCCCHHHHHHHHHHHHHHHHTTCE
T ss_pred -hCCCccEEEeCC---------CCCChHHHHHHHHHHhCC-----CCeEEEEcCCccccCHHHHHHHHHHHHHHHhcCCE
Confidence 221112333211 136999999999888742 3469999999987 666 8999987 7777788
Q ss_pred EEEEEEEcCCCcCCcccEEEECCCCCeEEEEEcCCcccccccccccccccccccccccccceeeeeEEEEeHHHHHHHHh
Q 014953 159 ITISCLPMDDSRASDFGLMKINNEGRVLSFSEKPKGKDLKAMAVDTTVLGLSKQEAEEKPYIASMGVYLFKKEILLNLLR 238 (415)
Q Consensus 159 ~ti~~~~~~~~~~~~~g~v~~d~~~~v~~~~ek~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Giyi~~~~~l~~~l~ 238 (415)
+|+.+.+..+ +..||++..|++++|..|.|||........ + ...++++++|+|+|++++|...++
T Consensus 139 ~t~~~~~~~~--~~~~g~i~~d~~~~V~~~~Ekp~~~~~~~~-~------------~~g~~~~n~Giy~~~~~~ll~~l~ 203 (308)
T 2qh5_A 139 VTFGVSIDKP--NTEFGYIESPNGLDVKRFIEKPSLDKAIEF-Q------------KSGGFYFNSGMFVFQAGVFLDELK 203 (308)
T ss_dssp EEEEEECSSC--CTTSEEEECSSSSBCSEEEESCCHHHHHHH-H------------HHCCEEEEEEEEEEEHHHHHHHHH
T ss_pred EEEEEecCCC--CCCceEEEECCCCEEEEEEECCChHHHHHH-h------------hcCCeEEEeEEEEEEHHHHHHHHH
Confidence 8888877654 467999988777899999999875321000 0 001368999999999987644443
Q ss_pred hhCCC------------C------Cccc---ccchh--------h-hcc-cceEEEEEeCceEEecCCHHHHHHHHHhh
Q 014953 239 WRFPT------------A------NDFG---SEIIP--------A-SAN-EQFLKAYLFNDYWEDIGTIRSFFEANLAL 286 (415)
Q Consensus 239 ~~~~~------------~------~~~~---~~~l~--------~-l~~-~~~i~~~~~~g~~~di~t~~~y~~an~~~ 286 (415)
...+. . ..+. .++++ . +++ +.++++++++++|.|||||++|.+++..-
T Consensus 204 ~~~p~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~sid~~lle~~~~v~~~~~~~~w~digt~~~l~~~~~~~ 282 (308)
T 2qh5_A 204 KHAPTILKGCERAFESLENAYFFEKKIARLSEKSMQDLEDMSIDIALMQQSHKIKMVELNAKWSDLGNFNALFEEAANE 282 (308)
T ss_dssp HHCHHHHHHHHHHGGGCEEECCSSSCEEEECHHHHHTSCCCCHHHHTTTTCSCEEEEECCSCCBC--------------
T ss_pred HhChHHHHHHHHHhhccccccccchhhhhhhHHHHhhCcccceeHHHhcCCCcEEEEECCCceeCCCCHHHHHHHhhcC
Confidence 32111 0 1111 23333 2 454 46899999999999999999999998754
No 20
>1jyk_A LICC protein, CTP:phosphocholine cytidylytransferase; 3D structure, CTP:phosphocholine cytidylyltransferase; 1.50A {Streptococcus pneumoniae} SCOP: c.68.1.13 PDB: 1jyl_A*
Probab=99.96 E-value=3.8e-29 Score=229.07 Aligned_cols=222 Identities=16% Similarity=0.221 Sum_probs=160.7
Q ss_pred cceEEEEEcCCCCCcccccccCCcccceeeCCcceeehhehhhhhccCCcEEEEEcccChhHHHHHHHhhccCCCCcccC
Q 014953 7 RTVAAVILGGGAGTRLYPLTKQRAKPAVPIGGAYRLIDVPMSNCINSGINKVYILTQYNSASLNRHLARAYNYGSGVTFG 86 (415)
Q Consensus 7 ~~~~aVILAaG~g~Rl~plt~~~pK~llpv~g~~pli~~~l~~l~~~gi~~I~vv~~~~~~~i~~~l~~~~~~~~~~~~~ 86 (415)
++|.|||||||.|+||+|+|..+||+|+|++|+ |||+|+++++.++|+++|+|++++..+++.++. +.+ +
T Consensus 24 ~~~~aiIlAaG~gtRl~plt~~~pK~l~~i~gk-pli~~~l~~l~~~g~~~i~vv~~~~~~~i~~~~-~~~--------~ 93 (254)
T 1jyk_A 24 IRVKAIILAAGLGTRLRPLTENTPKALVQVNQK-PLIEYQIEFLKEKGINDIIIIVGYLKEQFDYLK-EKY--------G 93 (254)
T ss_dssp CCCEEEEEECSCCGGGTTTTSSSCGGGCEETTE-EHHHHHHHHHHHTTCCCEEEEECTTGGGGTHHH-HHH--------C
T ss_pred cCceEEEECCCCcccCCcccCCCCCEEeeECCE-EHHHHHHHHHHHCCCCeEEEEeCCcHHHHHHHH-HhC--------C
Confidence 468999999999999999999999999999999 999999999999999999999998877775443 222 1
Q ss_pred CceEEEecCccCCCCCCCccccchHHHHHHhhhhhcCCCCCCcCeEEEEcCCeecccChHHHHHHHHHcCCcEEEEEEEc
Q 014953 87 DGCVEVLAATQTPGEAGKRWFQGTADAVRQFHWLFEDPRNKVIEDVLILSGDHLYRMDYMDFVQNHRQSGADITISCLPM 166 (415)
Q Consensus 87 ~~~v~i~~~~~~~~~~~~~~~~Gt~~al~~~~~~i~~~~~~~~~~~lv~~gD~i~~~~l~~~l~~h~~~~~~~ti~~~~~ 166 (415)
+.++...+. ...|++++++.++.++ +++++++||+++..++ ++.+.+.++.+|+ ..
T Consensus 94 ---~~iv~~~~~-------~~~g~~~al~~a~~~~--------~~~lv~~~D~~~~~~~---~~~~~~~~~~~t~---~~ 149 (254)
T 1jyk_A 94 ---VRLVFNDKY-------ADYNNFYSLYLVKEEL--------ANSYVIDADNYLFKNM---FRNDLTRSTYFSV---YR 149 (254)
T ss_dssp ---CEEEECTTT-------TTSCTHHHHHTTGGGC--------TTEEEEETTEEESSCC---CCSCCCSEEEEEC---EE
T ss_pred ---cEEEECCCc-------cCCCcHHHHHHHHHHC--------CCEEEEeCCcccCHHH---HHHHHhCCceEEE---Ec
Confidence 233332221 1259999999988766 2489999999776553 2222223332332 22
Q ss_pred CCCcCCcccEEEECCCCCeEEEEEcCCcccccccccccccccccccccccccceeeeeEEEEeHHHHH---HHHhhhCCC
Q 014953 167 DDSRASDFGLMKINNEGRVLSFSEKPKGKDLKAMAVDTTVLGLSKQEAEEKPYIASMGVYLFKKEILL---NLLRWRFPT 243 (415)
Q Consensus 167 ~~~~~~~~g~v~~d~~~~v~~~~ek~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Giyi~~~~~l~---~~l~~~~~~ 243 (415)
.++ ...|+++ +|++|+|..+.|++. ..++++|+|+|+++.+. .+++.....
T Consensus 150 ~~~-~~~~~v~-~d~~g~v~~~~e~~~------------------------~~~~~~Giy~~~~~~~~~l~~~l~~~~~~ 203 (254)
T 1jyk_A 150 EDC-TNEWFLV-YGDDYKVQDIIVDSK------------------------AGRILSGVSFWDAPTAEKIVSFIDKAYVS 203 (254)
T ss_dssp SSC-SSCCEEE-ECTTCBEEEEECCCS------------------------SEEBCCSEEEECHHHHHHHHHHHHHHHTT
T ss_pred ccC-CCCeEEE-ECCCCeEEEEEECCC------------------------CCcEEEEEEEEcHHHHHHHHHHHHHHHhc
Confidence 221 1357754 788899999998643 24688999999987433 333332221
Q ss_pred ---CCcccccchhhhcccceEEEEEeC-ceEEecCCHHHHHHHHHhhcC
Q 014953 244 ---ANDFGSEIIPASANEQFLKAYLFN-DYWEDIGTIRSFFEANLALTA 288 (415)
Q Consensus 244 ---~~~~~~~~l~~l~~~~~i~~~~~~-g~~~di~t~~~y~~an~~~l~ 288 (415)
...+..++++.++++.++.++.++ ++|.+|+|++||.+|++.+.+
T Consensus 204 ~~~~e~~~~d~~~~l~~~~~v~~~~~~~~~~~~Idt~edl~~a~~~l~~ 252 (254)
T 1jyk_A 204 GEFVDLYWDNMVKDNIKELDVYVEELEGNSIYEIDSVQDYRKLEEILKN 252 (254)
T ss_dssp TCCTTCCTTHHHHTTGGGCCEEEEECCTTSEEECCSHHHHHHHHHHHC-
T ss_pred CCccccCHHHHHHHHHhhCCeEEEEecCCeEEEcCCHHHHHHHHHHhhh
Confidence 234456677777778899999988 799999999999999987653
No 21
>2x65_A Mannose-1-phosphate guanylyltransferase; nucleotidyltransferase; HET: M1P; 2.10A {Thermotoga maritima} PDB: 2x5z_A* 2x60_A* 2x5s_A*
Probab=99.96 E-value=4.9e-29 Score=236.89 Aligned_cols=233 Identities=21% Similarity=0.318 Sum_probs=168.1
Q ss_pred eEEEEEcCCCCCcccccc-cCCcccceeeCC-cceeehhehhhhhcc-CCcEEEEEcccCh-hHHHHHHHhhccCCCCcc
Q 014953 9 VAAVILGGGAGTRLYPLT-KQRAKPAVPIGG-AYRLIDVPMSNCINS-GINKVYILTQYNS-ASLNRHLARAYNYGSGVT 84 (415)
Q Consensus 9 ~~aVILAaG~g~Rl~plt-~~~pK~llpv~g-~~pli~~~l~~l~~~-gi~~I~vv~~~~~-~~i~~~l~~~~~~~~~~~ 84 (415)
|++||||||.||||+||| ..+||+|+|++| + |||+|+++++..+ |+++++|++++.+ +.+.+++... ..
T Consensus 2 m~~VILAgG~GtRl~Pls~~~~pK~ll~l~g~~-pli~~~l~~l~~~~~~~~iivvt~~~~~~~i~~~l~~~------~~ 74 (336)
T 2x65_A 2 MKALILAGGSGERFWPLSTPETPKQFLKLFGNK-SLMRWTFERVLEEMDPKDVIVVTHKDYVERTKKELPEL------PD 74 (336)
T ss_dssp CEEEEECCCBCGGGTTTSCTTCBGGGCCCBTTB-CHHHHHHHHHHTTCCGGGEEEEEEGGGHHHHHHHCTTS------CG
T ss_pred eEEEEECCCCCccCCCCcCCCCCceEEECCCCC-cHHHHHHHHHhccCCCCcEEEEcChHHHHHHHHHhhcc------cc
Confidence 789999999999999999 789999999999 8 9999999999996 8999999999874 4566665321 11
Q ss_pred cCCceEEEecCccCCCCCCCccccchHHHHHHhhhhhcCCCCCCcCeEEEEcCCeeccc--Ch----HHHHHHHHHcCCc
Q 014953 85 FGDGCVEVLAATQTPGEAGKRWFQGTADAVRQFHWLFEDPRNKVIEDVLILSGDHLYRM--DY----MDFVQNHRQSGAD 158 (415)
Q Consensus 85 ~~~~~v~i~~~~~~~~~~~~~~~~Gt~~al~~~~~~i~~~~~~~~~~~lv~~gD~i~~~--~l----~~~l~~h~~~~~~ 158 (415)
+ . + ++.+ ..+||++++..+...+.. .+.+++++||+++.. +| ..++++|.+.++.
T Consensus 75 ~--~-i-i~e~----------~~~gta~ai~~a~~~~~~-----~~~~lvl~~D~~~~~~~~~~~~l~~~~~~~~~~~~~ 135 (336)
T 2x65_A 75 E--N-I-IAEP----------MKKNTAPACFIGTKLADD-----DEPVLVLPADHRIPDTKKFWKTVKKALDALEKYDGL 135 (336)
T ss_dssp G--G-E-EEES----------SCCCHHHHHHHHHTTSCT-----TCEEEEEETTCBCCCHHHHHHHHHHHHHHHHHHCSE
T ss_pred c--e-E-EeCC----------CCCCcHHHHHHHHHhhCC-----CCEEEEEcCCceeccHHHHHHHHHHHHHHHHhcCCe
Confidence 1 1 2 2211 136999999988765532 467999999997643 34 4455557766777
Q ss_pred EEEEEEEcCCCcCCcccEEEECCC-----CCeEEEEEcCCcccccccccccccccccccccccccceeeeeEEEEeHHHH
Q 014953 159 ITISCLPMDDSRASDFGLMKINNE-----GRVLSFSEKPKGKDLKAMAVDTTVLGLSKQEAEEKPYIASMGVYLFKKEIL 233 (415)
Q Consensus 159 ~ti~~~~~~~~~~~~~g~v~~d~~-----~~v~~~~ek~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Giyi~~~~~l 233 (415)
+|+.+.+... ...||++..+++ ++|..|.|||........ .....+++++|+|+|++++|
T Consensus 136 vt~~i~p~~~--~~~yG~I~~~~~~~~~~~~V~~f~EKp~~~~a~~~-------------~~~g~y~~n~Giy~~~~~~l 200 (336)
T 2x65_A 136 FTFGIVPTRP--ETGYGYIEIGEELEEGVHKVAQFREKPDLETAKKF-------------VESGRFLWNSGMFLWKAREF 200 (336)
T ss_dssp EEEEECCCSC--CSSSEEEEEEEEEETTEEEEEEEEESCCHHHHHHH-------------HHHTCEEEEEEEEEEEHHHH
T ss_pred EEEEeecccC--CCCceEEEECCccCCCccEEEEEEECCChHHHHHH-------------HhcCCeEEEeeeEEEEHHHH
Confidence 7887766543 367999988754 789999999986432100 00013689999999999987
Q ss_pred HHHHhhhCCC----------CC-cccccchhh---------hcc-cceEEEEEeCceEEecCCHHHHHHH
Q 014953 234 LNLLRWRFPT----------AN-DFGSEIIPA---------SAN-EQFLKAYLFNDYWEDIGTIRSFFEA 282 (415)
Q Consensus 234 ~~~l~~~~~~----------~~-~~~~~~l~~---------l~~-~~~i~~~~~~g~~~di~t~~~y~~a 282 (415)
...++...+. .. +|..+.++. +++ +.++++++++++|.||||+++|.++
T Consensus 201 l~~l~~~~p~~~~~~~~~~~~~e~~~~~~~~~~~~~sidy~vme~~~~v~v~~~~~~W~DiGt~~~l~~~ 270 (336)
T 2x65_A 201 IEEVKVCEPSIYENLKDVDPRNFEELKKAYEKVPSISVDYAVMEKSKKVRVVKADFEWSDLGNWSSVREI 270 (336)
T ss_dssp HHHHHHHCHHHHHHHTTCCTTCHHHHHHHHHHSCCCCHHHHTTTTCSCEEEEECSSCCBCCCSHHHHHHH
T ss_pred HHHHHHHCHHHHHHHHHhhhhhhhHHHHHHHhCccccHHHHHhcCCCeEEEEEecCCCcCCCCHHHHHhh
Confidence 4444432211 00 233445554 344 4789999999999999999999999
No 22
>3oam_A 3-deoxy-manno-octulosonate cytidylyltransferase; center for structural genomics of infectious diseases; 1.75A {Vibrio cholerae o1 biovar el tor} SCOP: c.68.1.13
Probab=99.95 E-value=3.5e-27 Score=215.70 Aligned_cols=239 Identities=18% Similarity=0.244 Sum_probs=169.7
Q ss_pred ceEEEEEcCCCCCcccccccCCcccceeeCCcceeehhehhhhhccCCcEEEEEcccChhHHHHHHHhhccCCCCcccCC
Q 014953 8 TVAAVILGGGAGTRLYPLTKQRAKPAVPIGGAYRLIDVPMSNCINSGINKVYILTQYNSASLNRHLARAYNYGSGVTFGD 87 (415)
Q Consensus 8 ~~~aVILAaG~g~Rl~plt~~~pK~llpv~g~~pli~~~l~~l~~~gi~~I~vv~~~~~~~i~~~l~~~~~~~~~~~~~~ 87 (415)
++.|||||+|.|||| | ||+|+|++|| |||+|+++++.++|+++|+|+++ .+.+.+++.+ ++
T Consensus 2 ~~~aiIlA~G~stRl-p-----~K~L~~i~Gk-Pli~~~l~~l~~~~~~~ivVv~~--~~~i~~~~~~---------~g- 62 (252)
T 3oam_A 2 SFTVVIPARYQSTRL-P-----GKPLADIGGK-PMIQWVYEQAMQAGADRVIIATD--DERVEQAVQA---------FG- 62 (252)
T ss_dssp CEEEEEECCCCCSSS-T-----TGGGCEETTE-EHHHHHHHHHHHTTCSEEEEEES--CHHHHHHHHH---------TT-
T ss_pred ceEEEEecCcCCCCC-C-----CcceeeECCE-EHHHHHHHHHHhCCCCeEEEECC--HHHHHHHHHH---------cC-
Confidence 588999999999999 3 8999999999 99999999999999999999985 4777777753 11
Q ss_pred ceEEEecCccCCCCCCCccccchHHHHHHhhhhhcCCCCCCcCeEEEEcCCe-ec-ccChHHHHHHHHHcCCcEEEEEEE
Q 014953 88 GCVEVLAATQTPGEAGKRWFQGTADAVRQFHWLFEDPRNKVIEDVLILSGDH-LY-RMDYMDFVQNHRQSGADITISCLP 165 (415)
Q Consensus 88 ~~v~i~~~~~~~~~~~~~~~~Gt~~al~~~~~~i~~~~~~~~~~~lv~~gD~-i~-~~~l~~~l~~h~~~~~~~ti~~~~ 165 (415)
+.++...+. .+.||++ +..+...+.. ...+.|++++||. ++ ..++.++++.|.+.++++++++.+
T Consensus 63 --~~v~~~~~~-------~~~Gt~~-~~~~~~~l~~---~~~d~vlv~~gD~Pli~~~~i~~l~~~~~~~~~~~~~~~~~ 129 (252)
T 3oam_A 63 --GVVCMTSPN-------HQSGTER-LAEVVAKMAI---PADHIVVNVQGDEPLIPPAIIRQVADNLAACSAPMATLAVE 129 (252)
T ss_dssp --CEEEECCTT-------CCSHHHH-HHHHHHHTTC---CTTSEEEECCTTCTTCCHHHHHHHHHHHHHSSCSEEEEEEE
T ss_pred --CEEEEcCCC-------CCCcHHH-HHHHHHhcCc---CCCCEEEEEeCCeeecCHHHHHHHHHHHHhcCCCEEEEeee
Confidence 122221121 2368888 4555555521 0158899999998 33 556899999999888899999998
Q ss_pred cCCCcCCcc-----cEEEECCCCCeEEEEEcCCcccccccccccccccccccccccccceeeeeEEEEeHHHHHHHHhhh
Q 014953 166 MDDSRASDF-----GLMKINNEGRVLSFSEKPKGKDLKAMAVDTTVLGLSKQEAEEKPYIASMGVYLFKKEILLNLLRWR 240 (415)
Q Consensus 166 ~~~~~~~~~-----g~v~~d~~~~v~~~~ek~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Giyi~~~~~l~~~l~~~ 240 (415)
.++ +.+| +.+..|++|+++.|.++|-........ ..+.....+++.++|+|+|++++|..+....
T Consensus 130 v~~--~~~~~~p~~g~vv~d~~g~v~~fsr~~i~~~~~~~~--------~~~~~~~~~~~~n~GiY~~~~~~l~~~~~~~ 199 (252)
T 3oam_A 130 IED--EAEVFNPNAVKVITDKSGYALYFSRATIPWDRDNFA--------KADKAIVQPLLRHIGIYAYRAGFINTYLDWQ 199 (252)
T ss_dssp ECC--HHHHTCTTSCEEEECTTSBEEEEESSCSSCCHHHHH--------SSSCCCCSCEEEEEEEEEEETTHHHHHHHSC
T ss_pred cCC--HHHhhCCCceEEEECCCCeEEEEeCCCCCCCCCccc--------cccccccccceEEEEEEEcCHHHHHHHHcCC
Confidence 876 4455 899999999999999987543210000 0000001257899999999999998765432
Q ss_pred CCCCCcccc--cchhhhcccceEEEEEeC-ceEEecCCHHHHHHHHHhhcCC
Q 014953 241 FPTANDFGS--EIIPASANEQFLKAYLFN-DYWEDIGTIRSFFEANLALTAH 289 (415)
Q Consensus 241 ~~~~~~~~~--~~l~~l~~~~~i~~~~~~-g~~~di~t~~~y~~an~~~l~~ 289 (415)
+......+ +.+..+-.+.+|.++..+ .+|.+||||+||.+|++.+.++
T Consensus 200 -~~~~e~~E~le~lr~l~~G~~i~~~~~~~~~~~~idt~~dl~~a~~~~~~r 250 (252)
T 3oam_A 200 -PSQLEKIECLEQLRVLWHGEKIHVAVALEAPPAGVDTPEDLEVVRRIVAER 250 (252)
T ss_dssp -CCHHHHHHTCTTHHHHHTTCCEEEEECSSCCCCCCCSHHHHHHHHHHHHHT
T ss_pred -CCcccccchhHHHHHHHCCCeEEEEEecCCCCCCCCCHHHHHHHHHHHHhh
Confidence 11111001 223333346799998765 4689999999999999877654
No 23
>2cu2_A Putative mannose-1-phosphate guanylyl transferase; mannose-1-phosphate geranyltransferase, thermus thermophilus structural genomics; 2.20A {Thermus thermophilus} SCOP: b.81.4.1 c.68.1.20
Probab=99.95 E-value=4.2e-28 Score=230.52 Aligned_cols=233 Identities=20% Similarity=0.311 Sum_probs=163.0
Q ss_pred ceEEEEEcCCCCCcccccc-cCCcccceeeCC-cceeehhehhhhhcc-CCcEEEEEcccCh-hHHHHHHHhhccCCCCc
Q 014953 8 TVAAVILGGGAGTRLYPLT-KQRAKPAVPIGG-AYRLIDVPMSNCINS-GINKVYILTQYNS-ASLNRHLARAYNYGSGV 83 (415)
Q Consensus 8 ~~~aVILAaG~g~Rl~plt-~~~pK~llpv~g-~~pli~~~l~~l~~~-gi~~I~vv~~~~~-~~i~~~l~~~~~~~~~~ 83 (415)
+|.+||||||.||||+||| ..+||+|+|++| + |||+|+++++..+ |+++++|++++.+ +.+.+++ +.
T Consensus 2 ~m~~VILAgG~GtRl~Pls~~~~pK~ll~l~G~~-pli~~~l~~l~~~~~~~~iiVvt~~~~~~~i~~~l------~~-- 72 (337)
T 2cu2_A 2 KTYALVMAGGRGERLWPLSREDRPKPFLPLFEGK-TLLEATLERLAPLVPPERTLLAVRRDQEAVARPYA------DG-- 72 (337)
T ss_dssp CEEEEEECCCCCGGGTTTCBTTBCGGGCBCGGGC-BHHHHHHHHHTTTSCGGGEEEEEEGGGHHHHGGGC------SS--
T ss_pred CeEEEEEcCCCcccCCccCCCCCCceEEEcCCCC-hHHHHHHHHHhCcCCCCCEEEEcChHHHHHHHHHh------cc--
Confidence 4899999999999999999 689999999999 8 9999999999998 8999999999864 3333332 11
Q ss_pred ccCCceEEEecCccCCCCCCCccccchHHHHHHhhhhhcCCCCCCcCeEEEEcCCeeccc--ChHHHHH----HHHHcCC
Q 014953 84 TFGDGCVEVLAATQTPGEAGKRWFQGTADAVRQFHWLFEDPRNKVIEDVLILSGDHLYRM--DYMDFVQ----NHRQSGA 157 (415)
Q Consensus 84 ~~~~~~v~i~~~~~~~~~~~~~~~~Gt~~al~~~~~~i~~~~~~~~~~~lv~~gD~i~~~--~l~~~l~----~h~~~~~ 157 (415)
. .+ ++.+ ...||+.++..+.. +... ...+.|++++||+++.. .|..+++ +|.+ ++
T Consensus 73 -~---~~-i~e~----------~~~gta~ai~~a~~-l~~~--~~~~~~lvl~~D~~~~~~~~~~~~l~~~~~~~~~-~~ 133 (337)
T 2cu2_A 73 -I---RL-LLEP----------LGRDTAGAVLLGVA-EALK--EGAERLLVLPADHYVGDDEAYREALATMLEAAEE-GF 133 (337)
T ss_dssp -S---EE-EEES----------SCCHHHHHHHHHHH-HHHH--HTCSEEEEEESSCEESCHHHHHHHHHHHHHHCCT-TC
T ss_pred -C---ce-EecC----------CCCCcHHHHHHHHH-Hhcc--CCCCEEEEEECCccCCCHHHHHHHHHHHHHHHHc-CC
Confidence 0 11 2221 13699999988876 5210 01478999999997653 3444444 3444 66
Q ss_pred cEEEEEEEcCCCcCCcccEEEECCC----CCeEEEEEcCCcccccccccccccccccccccccccceeeeeEEEEeHHHH
Q 014953 158 DITISCLPMDDSRASDFGLMKINNE----GRVLSFSEKPKGKDLKAMAVDTTVLGLSKQEAEEKPYIASMGVYLFKKEIL 233 (415)
Q Consensus 158 ~~ti~~~~~~~~~~~~~g~v~~d~~----~~v~~~~ek~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Giyi~~~~~l 233 (415)
.+|+...+... ...||++..+++ ++|..|.|||....... +....+++++|+|+|++++|
T Consensus 134 ~vt~~i~p~~~--~t~yG~I~~~~~~~~~~~V~~f~EKp~~~~a~~--------------~~~~g~~~n~Giy~f~~~~l 197 (337)
T 2cu2_A 134 VVALGLRPTRP--ETEYGYIRLGPREGAWYRGEGFVEKPSYAEALE--------------YIRKGYVWNGGVFAFAPATM 197 (337)
T ss_dssp EEEEEECCSSC--CSSSCEEEEEEEETTEEEEEEEECCCCHHHHHH--------------HHHTTCEEEEEEEEECHHHH
T ss_pred eEEEeeccCCC--CCCceEEEECCcccccCeEEEEEeCCChHHHHH--------------HhhcCCEEEEEEEEEeHHHH
Confidence 77777766543 467999988765 78999999997543110 00011689999999999987
Q ss_pred HHHHhhhCCCC-Ccc--------cccchhh---------hcc-cceEEEEEeCceEEecCCHHHHHHHHH
Q 014953 234 LNLLRWRFPTA-NDF--------GSEIIPA---------SAN-EQFLKAYLFNDYWEDIGTIRSFFEANL 284 (415)
Q Consensus 234 ~~~l~~~~~~~-~~~--------~~~~l~~---------l~~-~~~i~~~~~~g~~~di~t~~~y~~an~ 284 (415)
...++...+.. ..+ ..+.++. +++ +.++++++++++|.|+||+++|.++..
T Consensus 198 l~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~sidy~vme~~~~v~v~~~~~~W~DvGt~~~l~~~~~ 267 (337)
T 2cu2_A 198 AELFRRHLPSHHEALERLLAGASLEEVYAGLPKISIDYGVMEKAERVRVVLGRFPWDDVGNWRALERVFS 267 (337)
T ss_dssp HHHHHHHCHHHHHHHHHHHTTCCHHHHHHTSCCCCHHHHTGGGCSSEEEEEECSCEECCCSTTHHHHHHT
T ss_pred HHHHHHHCHHHHHHHHHHhcCCcHHHHHhhCccchHHHHHhhCCCcEEEEEeCCcEEcCCCHHHHHHHhh
Confidence 44554332210 000 0223332 344 468999999999999999999999954
No 24
>3tqd_A 3-deoxy-manno-octulosonate cytidylyltransferase; cell envelope; 1.80A {Coxiella burnetii} SCOP: c.68.1.0
Probab=99.93 E-value=9.3e-25 Score=199.06 Aligned_cols=236 Identities=16% Similarity=0.170 Sum_probs=159.2
Q ss_pred cceEEEEEcCCCCCcccccccCCcccceeeCCcceeehhehhhhhccCCcEEEEEcccChhHHHHHHHhhccCCCCcccC
Q 014953 7 RTVAAVILGGGAGTRLYPLTKQRAKPAVPIGGAYRLIDVPMSNCINSGINKVYILTQYNSASLNRHLARAYNYGSGVTFG 86 (415)
Q Consensus 7 ~~~~aVILAaG~g~Rl~plt~~~pK~llpv~g~~pli~~~l~~l~~~gi~~I~vv~~~~~~~i~~~l~~~~~~~~~~~~~ 86 (415)
+++.|||||+|.||||. ||+|+|++|| |||+|+++++.++|+++|+|+++ .+.+.+++.. ++
T Consensus 8 M~~~aIIlA~G~stRl~------~K~L~~i~Gk-Pli~~~l~~l~~~~i~~VvVvt~--~~~i~~~~~~---------~g 69 (256)
T 3tqd_A 8 MEFRVIIPARFDSTRLP------GKALVDIAGK-PMIQHVYESAIKSGAEEVVIATD--DKRIRQVAED---------FG 69 (256)
T ss_dssp -CCEEEEECCCC---CT------TGGGCEETTE-EHHHHHHHHHHHTTCSEEEEEES--CHHHHHHHHH---------TT
T ss_pred CCceEEEEcCCCCCCCC------CCCeeeECCc-hHHHHHHHHHHhCCCCEEEEECC--HHHHHHHHHH---------cC
Confidence 56899999999999993 8999999999 99999999999999999999985 4667776643 11
Q ss_pred CceEEEecCccCCCCCCCccccchHHHHHHhhhhhcCCCCCCcCeEEEEcCCe-ec-ccChHHHHHHHHHc-CCcEEEEE
Q 014953 87 DGCVEVLAATQTPGEAGKRWFQGTADAVRQFHWLFEDPRNKVIEDVLILSGDH-LY-RMDYMDFVQNHRQS-GADITISC 163 (415)
Q Consensus 87 ~~~v~i~~~~~~~~~~~~~~~~Gt~~al~~~~~~i~~~~~~~~~~~lv~~gD~-i~-~~~l~~~l~~h~~~-~~~~ti~~ 163 (415)
+.++...+. ++.|++. +..+..++.. ...+.|+++.||. ++ ...+..+++.|.+. ++++++++
T Consensus 70 ---~~v~~~~~~-------~~~Gt~~-i~~a~~~l~~---~~~d~vlv~~gD~Pli~~~~i~~li~~~~~~~~~~~a~l~ 135 (256)
T 3tqd_A 70 ---AVVCMTSSD-------HQSGTER-IAEAAVALGF---EDDEIIVCLQGDEPLIPPDAIRKLAEDLDEHDNVKVASLC 135 (256)
T ss_dssp ---CEEEECCTT-------CCSHHHH-HHHHHHHTTC---CTTCEEEEECTTCCCCCHHHHHHHHHHHHHCC--CEEEEE
T ss_pred ---CeEEEeCCC-------CCCcHHH-HHHHHHHhCc---CCCCEEEEEeCCcccCCHHHHHHHHHHHHhCCCCCEEEEe
Confidence 122211111 2358876 7777777631 0158999999999 44 44589999999875 55777777
Q ss_pred EEcCCC----cCCcccEEEECCCCCeEEEEEcCCcccccccccccccccccccccccccceeeeeEEEEeHHHHHHHHhh
Q 014953 164 LPMDDS----RASDFGLMKINNEGRVLSFSEKPKGKDLKAMAVDTTVLGLSKQEAEEKPYIASMGVYLFKKEILLNLLRW 239 (415)
Q Consensus 164 ~~~~~~----~~~~~g~v~~d~~~~v~~~~ek~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Giyi~~~~~l~~~l~~ 239 (415)
.+..++ ++..++ +..|++|+++.|.++|.+........ ........+++...|+|.|++++|..+..
T Consensus 136 ~~v~~~~~~~~p~~vk-vv~d~~g~~l~fsr~pip~~r~~~~~-------~~~~~~~~~~~~~~GiY~y~~~~l~~~~~- 206 (256)
T 3tqd_A 136 TPITEVDELFNPHSTK-VVLNRRNYALYFSHAPIPWGRDTFSD-------KENLQLNGSHYRHVGIYAYRVGFLEEYLS- 206 (256)
T ss_dssp EECCCHHHHTCTTSCE-EEECTTSBEEEEESSCSSCCTTTTTC-------GGGCCCSSCCEEEEEEEEEEHHHHHHHHH-
T ss_pred eEcCCHHHhhCCCccE-EEECCCCEEeEEecCCCCCCCccccc-------ccccccCCcceEEEEEEEcCHHHHHHHHh-
Confidence 776431 123333 56788999999999987432100000 00000012578999999999999976543
Q ss_pred hCCCCCcccc----cchhhhcccceEEEEEeCce-EEecCCHHHHHHHHHh
Q 014953 240 RFPTANDFGS----EIIPASANEQFLKAYLFNDY-WEDIGTIRSFFEANLA 285 (415)
Q Consensus 240 ~~~~~~~~~~----~~l~~l~~~~~i~~~~~~g~-~~di~t~~~y~~an~~ 285 (415)
..+. .++. +.+..+-.+.+|.++.++++ |.+||||+||.+|++.
T Consensus 207 l~~s--~lE~~e~leqlr~le~G~~i~~~~~~~~~~~~idtpeDl~~a~~~ 255 (256)
T 3tqd_A 207 WDAC--PAEKMEALEQLRILWHGGRIHMVVAKSKCPPGVDTEEDLERVRAY 255 (256)
T ss_dssp SCCC--HHHHHHTCTTHHHHHTTCCCEEEECSSCCCCCCSSHHHHHHHHTT
T ss_pred CCCC--cccchhhhHHHHHHHCCCeEEEEEeCCCCCCCcCCHHHHHHHHHh
Confidence 2122 1111 23444556789999999975 8999999999999764
No 25
>3k8d_A 3-deoxy-manno-octulosonate cytidylyltransferase; KDSB synthetase KDO complex, lipopolysaccharide biosynthesis magnesium, nucleotidyltransferase; HET: KDO CTP; 1.90A {Escherichia coli} SCOP: c.68.1.13 PDB: 3k8e_C 1vh1_A 3jtj_A*
Probab=99.92 E-value=1.4e-24 Score=198.80 Aligned_cols=236 Identities=17% Similarity=0.229 Sum_probs=163.6
Q ss_pred cceEEEEEcCCCCCcccccccCCcccceeeCCcceeehhehhhhhccCCcEEEEEcccChhHHHHHHHhhccCCCCcccC
Q 014953 7 RTVAAVILGGGAGTRLYPLTKQRAKPAVPIGGAYRLIDVPMSNCINSGINKVYILTQYNSASLNRHLARAYNYGSGVTFG 86 (415)
Q Consensus 7 ~~~~aVILAaG~g~Rl~plt~~~pK~llpv~g~~pli~~~l~~l~~~gi~~I~vv~~~~~~~i~~~l~~~~~~~~~~~~~ 86 (415)
+++.|||||+|.|||| | +|+|+|++|| |||+|+++++.++|+++|+|+++ .+.+.+++.+ ++
T Consensus 17 M~~~aIIlA~G~stRl-p-----~K~L~~i~Gk-Pmi~~~l~~l~~~~i~~IvV~t~--~~~i~~~~~~---------~g 78 (264)
T 3k8d_A 17 MSFVVIIPARYASTRL-P-----GKPLVDINGK-PMIVHVLERARESGAERIIVATD--HEDVARAVEA---------AG 78 (264)
T ss_dssp -CCEEEEECCSCCSSS-T-----TGGGCEETTE-EHHHHHHHHHHHTTCSEEEEEES--CHHHHHHHHH---------TT
T ss_pred CceEEEEEcCCCCCCC-C-----CcceeeECCe-EHHHHHHHHHHhCCCCEEEEECC--HHHHHHHHHH---------cC
Confidence 4678999999999999 2 5999999999 99999999999999999999884 4667766643 11
Q ss_pred CceEEEecCccCCCCCCCccccchHHHHHHhhhhhcCCCCCCcCeEEEEcCCe-ec-ccChHHHHHHHHHcCCcEEEEEE
Q 014953 87 DGCVEVLAATQTPGEAGKRWFQGTADAVRQFHWLFEDPRNKVIEDVLILSGDH-LY-RMDYMDFVQNHRQSGADITISCL 164 (415)
Q Consensus 87 ~~~v~i~~~~~~~~~~~~~~~~Gt~~al~~~~~~i~~~~~~~~~~~lv~~gD~-i~-~~~l~~~l~~h~~~~~~~ti~~~ 164 (415)
+.++...+ +++.||+. +..+...+.. ...+.|+++.||. +. ...+..+++.|.+.++++++++.
T Consensus 79 ---~~v~~~~~-------~~~~Gt~~-i~~~~~~l~~---~~~d~vlv~~gD~Pli~~~~i~~li~~~~~~~~~~~~~~~ 144 (264)
T 3k8d_A 79 ---GEVCMTRA-------DHQSGTER-LAEVVEKCAF---SDDTVIVNVQGDEPMIPATIIRQVADNLAQRQVGMATLAV 144 (264)
T ss_dssp ---CEEEECCT-------TCCSHHHH-HHHHHHHHTC---CTTCEEEEECTTCTTCCHHHHHHHHHHHHTSSCSEEEEEE
T ss_pred ---CEEEEecC-------CCCCCHHH-HHHHHHHhcc---CCCCEEEEEcCCcccCCHHHHHHHHHHHhhcCCCEEEEEE
Confidence 12221111 12358876 7777776631 1158999999999 33 45589999999888889999999
Q ss_pred EcCCCc----CCcccEEEECCCCCeEEEEEcCCcccccccccccccccccccccccccceeeeeEEEEeHHHHHHHHhhh
Q 014953 165 PMDDSR----ASDFGLMKINNEGRVLSFSEKPKGKDLKAMAVDTTVLGLSKQEAEEKPYIASMGVYLFKKEILLNLLRWR 240 (415)
Q Consensus 165 ~~~~~~----~~~~g~v~~d~~~~v~~~~ek~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Giyi~~~~~l~~~l~~~ 240 (415)
+..++. +..+ .+..|++|+++.|.++|.......... ...+. ..+++.++|+|.|++++|..+...
T Consensus 145 ~v~d~~~~~~p~~v-kVv~d~~g~~l~fsr~~ip~~r~~~~~-------~~~~~-~~~~~~~~GiY~y~~~~l~~~~~~- 214 (264)
T 3k8d_A 145 PIHNAEEAFNPNAV-KVVLDAEGYALYFSRATIPWDRDRFAE-------GLETV-GDNFLRHLGIYGYRAGFIRRYVNW- 214 (264)
T ss_dssp ECCSHHHHTCTTSC-EEEECTTSBEEEEESSCCSCCHHHHHH-------CSSCC-CSCCEEECSEEEEEHHHHHHHHHS-
T ss_pred EcCCHHHccCCCce-EEEECCCCeEEEEecCCCCCCCccccc-------ccccc-CCcceEEEEEEEECHHHHHHHHhC-
Confidence 887521 1222 356788999999999986422100000 00000 124788999999999999876542
Q ss_pred CCCCCcccc----cchhhhcccceEEEEEeC-ceEEecCCHHHHHHHHHhh
Q 014953 241 FPTANDFGS----EIIPASANEQFLKAYLFN-DYWEDIGTIRSFFEANLAL 286 (415)
Q Consensus 241 ~~~~~~~~~----~~l~~l~~~~~i~~~~~~-g~~~di~t~~~y~~an~~~ 286 (415)
.+. .++. +.+..+-.+.+|+++... .+|.+|+||+||.+|+..+
T Consensus 215 ~~~--~lE~~e~leqlr~le~G~~I~~~~~~~~~~~~IdtpeDl~~a~~~l 263 (264)
T 3k8d_A 215 QPS--PLEHIEMLEQLRVLWYGEKIHVAVAQEVPGTGVDTPEDLERVRAEM 263 (264)
T ss_dssp CCC--HHHHHHTCTTHHHHHTTCCEEEEECSCCCSCCCCSHHHHHHHHHHC
T ss_pred CCC--hhhhHHHHHHHHHHHCCCceEEEEeCCCCCCCCCCHHHHHHHHHHh
Confidence 121 1111 233444557799998664 4689999999999998743
No 26
>2y6p_A 3-deoxy-manno-octulosonate cytidylyltransferase; lipid A; HET: CTP; 2.10A {Aquifex aeolicus}
Probab=99.91 E-value=1.4e-23 Score=189.79 Aligned_cols=224 Identities=18% Similarity=0.221 Sum_probs=153.1
Q ss_pred ceEEEEEcCCCCCcccccccCCcccceeeCCcceeehhehhhhhccCCcEEEEEcccChhHHHHHHHhhccCCCCcccCC
Q 014953 8 TVAAVILGGGAGTRLYPLTKQRAKPAVPIGGAYRLIDVPMSNCINSGINKVYILTQYNSASLNRHLARAYNYGSGVTFGD 87 (415)
Q Consensus 8 ~~~aVILAaG~g~Rl~plt~~~pK~llpv~g~~pli~~~l~~l~~~gi~~I~vv~~~~~~~i~~~l~~~~~~~~~~~~~~ 87 (415)
++.|||||||.|+||+ ||+|+|++|+ |||+|+++++.++ +++|+|++++ +++.+++.+ +
T Consensus 2 ~~~aiIlA~G~g~R~~------~K~l~~i~g~-pli~~~l~~~~~~-~~~i~v~~~~--~~i~~~~~~---------~-- 60 (234)
T 2y6p_A 2 RRAVIIPARLGSTRLK------EKPLKNLLGK-PLIRWVVEGLVKT-GERVILATDS--ERVKEVVED---------L-- 60 (234)
T ss_dssp CEEEEEECCSCCTTTT------TGGGCEETTE-EHHHHHHHHHHTT-TSCEEEEESC--HHHHHHHTT---------T--
T ss_pred ceEEEEEcCCCCCCCC------CCcceeECCE-EHHHHHHHHHHHh-CCEEEEECCh--HHHHHHHHh---------c--
Confidence 5789999999999995 9999999999 9999999999999 9999999976 566666532 1
Q ss_pred ceEEEecCccCCCCCCCccccchHHHHHHhhhhhcCCCCCCcCeEEEEcCCe-ecc-cChHHHHHHHHHcCCcEEEEEEE
Q 014953 88 GCVEVLAATQTPGEAGKRWFQGTADAVRQFHWLFEDPRNKVIEDVLILSGDH-LYR-MDYMDFVQNHRQSGADITISCLP 165 (415)
Q Consensus 88 ~~v~i~~~~~~~~~~~~~~~~Gt~~al~~~~~~i~~~~~~~~~~~lv~~gD~-i~~-~~l~~~l~~h~~~~~~~ti~~~~ 165 (415)
+.++...+. ...|+++++ .++..+. .+.|++++||. +++ .++.++++.|.+.++.++++...
T Consensus 61 --~~~~~~~~~-------~~~g~~~~~-~~~~~~~------~~~vlv~~~D~P~~~~~~i~~l~~~~~~~~~~~~~~~~~ 124 (234)
T 2y6p_A 61 --CEVFLTPSD-------LPSGSDRVL-YVVRDLD------VDLIINYQGDEPFVYEEDIKLIFRELEKGERVVTLARKD 124 (234)
T ss_dssp --SEEEECCTT-------CCSHHHHHH-HHHTTCC------CSEEEECCTTCCCCCHHHHHHHHHHHHHTCSEEEEEEEC
T ss_pred --eEEEECCcc-------cccchHHHH-HHHHhCC------CCEEEEecCCcCcCCHHHHHHHHHHHHhCCCeEEEecCC
Confidence 112211111 124788766 3444332 47899999999 777 56899999998877444554442
Q ss_pred cCC-CcCCcccEEEECCCCCeEEEEEcCCcccccccccccccccccccccccccceeeeeEEEEeHHHHHHHHhhhCCCC
Q 014953 166 MDD-SRASDFGLMKINNEGRVLSFSEKPKGKDLKAMAVDTTVLGLSKQEAEEKPYIASMGVYLFKKEILLNLLRWRFPTA 244 (415)
Q Consensus 166 ~~~-~~~~~~g~v~~d~~~~v~~~~ek~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Giyi~~~~~l~~~l~~~~~~~ 244 (415)
... ..+..++ +..+++|++..+.++|..... ++. ..+.+.++|+|+|+++.|..+.... +..
T Consensus 125 ~~~~~~~~~~~-~~~~~~g~v~~~~e~~~~~~~--------------~~~-~~~~~~~~giy~~~~~~l~~~~~~~-~~~ 187 (234)
T 2y6p_A 125 KEAYERPEDVK-VVLDREGYALYFSRSPIPYFR--------------KND-TFYPLKHVGIYGFRKETLMEFGAMP-PSK 187 (234)
T ss_dssp SGGGGCTTSCE-EEECTTSBEEEEESSCCSCCS--------------SCC-SSCCEEEEEEEEEEHHHHHHHHHSC-CCH
T ss_pred HHHhcCCCceE-EEEcCCCCEeeeecCCCCccc--------------ccc-cceeeEEEEEEEcCHHHHHHHHhCC-CCc
Confidence 111 1123344 345778999999998753110 000 0124679999999999987655321 111
Q ss_pred Ccccccc---hhhhcccceEEEEEeCceEEecCCHHHHHHHHHhh
Q 014953 245 NDFGSEI---IPASANEQFLKAYLFNDYWEDIGTIRSFFEANLAL 286 (415)
Q Consensus 245 ~~~~~~~---l~~l~~~~~i~~~~~~g~~~di~t~~~y~~an~~~ 286 (415)
... .+. +..+..+.++.++..+++|.||+||+||..|++.+
T Consensus 188 ~~~-~d~~~~~~~~~~g~~v~~~~~~~~~~dI~t~~dl~~a~~~~ 231 (234)
T 2y6p_A 188 LEQ-IEGLEQLRLLENGIKIKVLITENYYHGVDTEEDLKIVEEKL 231 (234)
T ss_dssp HHH-HHTCTHHHHHHTTCCCEEEECCSCCCCCCSHHHHHHHHHHC
T ss_pred cch-hhHHHHHHHHHCCCeEEEEEeCCcccCCCCHHHHHHHHHHH
Confidence 011 111 22233478999999999999999999999998765
No 27
>2xme_A CTP-inositol-1-phosphate cytidylyltransferase; CDP-inositol, DI-MYO-inositol phosphate; 1.89A {Archaeoglobus fulgidus} PDB: 2xmh_A*
Probab=99.91 E-value=3.9e-24 Score=193.25 Aligned_cols=214 Identities=18% Similarity=0.221 Sum_probs=135.9
Q ss_pred ccceEEEEEcCCCCCcccccccCCcccceeeCCcceeehhehhhhhccCCcEEEEEcccChhHHHHHHHhhccCCCCccc
Q 014953 6 ARTVAAVILGGGAGTRLYPLTKQRAKPAVPIGGAYRLIDVPMSNCINSGINKVYILTQYNSASLNRHLARAYNYGSGVTF 85 (415)
Q Consensus 6 ~~~~~aVILAaG~g~Rl~plt~~~pK~llpv~g~~pli~~~l~~l~~~gi~~I~vv~~~~~~~i~~~l~~~~~~~~~~~~ 85 (415)
|++|.|||||||.|+||+|+ ||+|+|++|+ |||+|+++++.++ +++|+|++ +..+++.+++...+
T Consensus 16 m~~~~~iIlA~G~g~R~~~~----~K~l~~i~g~-pli~~~l~~l~~~-~~~i~vv~-~~~~~~~~~~~~~~-------- 80 (232)
T 2xme_A 16 IKLMKAVILAAGLGTRLGGV----PKPLVRVGGC-EIILRTMKLLSPH-VSEFIIVA-SRYADDIDAFLKDK-------- 80 (232)
T ss_dssp CCCEEEEEEECC------CC----CGGGCEETTE-EHHHHHHHHHGGG-EEEEEEEE-STTHHHHHHHHTTS--------
T ss_pred cccceEEEECCcCcCcCCCC----CcEEeEECCE-EHHHHHHHHHHHh-CCEEEEEe-CChHHHHHHHHHhc--------
Confidence 56799999999999999976 9999999999 9999999999998 99999999 77777777764322
Q ss_pred CCceEEEecCccCCCCCCCccccchHHHHHHhhhhhcCCCCCCcCeEEEEcCCeecccC-hHHHHHHHHHcCCcEEEEEE
Q 014953 86 GDGCVEVLAATQTPGEAGKRWFQGTADAVRQFHWLFEDPRNKVIEDVLILSGDHLYRMD-YMDFVQNHRQSGADITISCL 164 (415)
Q Consensus 86 ~~~~v~i~~~~~~~~~~~~~~~~Gt~~al~~~~~~i~~~~~~~~~~~lv~~gD~i~~~~-l~~~l~~h~~~~~~~ti~~~ 164 (415)
+. .+.++..... ..|++++++.++.+++ +++++++||++++.+ +..+++ .. . +++..
T Consensus 81 ~~-~~~~v~~~~~--------~~g~~~~i~~a~~~~~-------~~~lv~~~D~p~~~~~~~~l~~----~~-~-~~~~~ 138 (232)
T 2xme_A 81 GF-NYKIVRHDRP--------EKGNGYSLLVAKNHVE-------DRFILTMGDHVYSQQFIEKAVR----GE-G-VIADR 138 (232)
T ss_dssp CC-CEEEEECSCG--------GGCHHHHHHTTGGGCC-------SSEEEEETTEEECHHHHHHHTT----CC-E-EEEES
T ss_pred CC-cEEEEECCCC--------CCCcHHHHHHHHHHCC-------CCEEEEcCCcccCHHHHHHHHh----CC-C-cEEEc
Confidence 11 1334332111 2599999999987763 579999999987554 244433 21 1 22221
Q ss_pred EcCCCcCCcccEEEECCCCCeEEEEEcCCcccccccccccccccccccccccccceeeeeEEEEeHHHHHHHHhhhCCCC
Q 014953 165 PMDDSRASDFGLMKINNEGRVLSFSEKPKGKDLKAMAVDTTVLGLSKQEAEEKPYIASMGVYLFKKEILLNLLRWRFPTA 244 (415)
Q Consensus 165 ~~~~~~~~~~g~v~~d~~~~v~~~~ek~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Giyi~~~~~l~~~l~~~~~~~ 244 (415)
........+++.+..+ +|++..+.+++.. ++..++|+|++++++|. .+++.....
T Consensus 139 ~~~~~~~~~~~~v~~~-~g~v~~~~~~~~~-----------------------~~~~~~g~~~~~~~~~~-~l~~~~~~g 193 (232)
T 2xme_A 139 EPRFVDIGEATKIRVE-DGRVAKIGKDLRE-----------------------FDCVDTGFFVLDDSIFE-HAEKLRDRE 193 (232)
T ss_dssp SCSSSCTTTSCEEEEE-TTEEEEEETTCSS-----------------------CSEEEEEEEEECTTHHH-HHGGGTTSS
T ss_pred cccccCCCcceEEEEc-CCEEEEeecCCCC-----------------------cceEEEEEEEECHHHHH-HHHHHHhcC
Confidence 1111123456666665 6899999877542 24678999999999886 444432111
Q ss_pred CcccccchhhhcccceEEEEEeC-ceEEecCCHHHHHHHHHh
Q 014953 245 NDFGSEIIPASANEQFLKAYLFN-DYWEDIGTIRSFFEANLA 285 (415)
Q Consensus 245 ~~~~~~~l~~l~~~~~i~~~~~~-g~~~di~t~~~y~~an~~ 285 (415)
...++.+++.+++.++.++ ++|.||+||+||.+|++.
T Consensus 194 ----~~~l~~ll~~~~v~~~~~~~~~~~dI~tpeDl~~a~~~ 231 (232)
T 2xme_A 194 ----EIPLSEIVKLARLPVTYVDGELWMDVDTKEDVRRANRA 231 (232)
T ss_dssp ----CCCHHHHHHHHTCBEEECCSCCEEEEECC---------
T ss_pred ----hhHHHHHHHcCCEEEEEECCCCEEeCCCHHHHHHHHhh
Confidence 1224455555567777775 689999999999998764
No 28
>1h7e_A 3-deoxy-manno-octulosonate cytidylyltransferase; nucleotidyltransferase, CMP-KDO synthetase, nucleoside monophosphate glycosides; 1.83A {Escherichia coli} SCOP: c.68.1.13 PDB: 1gqc_A* 1gq9_A 1h6j_A 1h7f_A* 1h7g_A* 1h7h_A* 1h7t_A*
Probab=99.90 E-value=7.4e-23 Score=186.35 Aligned_cols=228 Identities=17% Similarity=0.239 Sum_probs=155.4
Q ss_pred ceEEEEEcCCCCCcccccccCCcccceeeCCcceeehhehhhhhccCC-cEEEEEcccChhHHHHHHHhhccCCCCcccC
Q 014953 8 TVAAVILGGGAGTRLYPLTKQRAKPAVPIGGAYRLIDVPMSNCINSGI-NKVYILTQYNSASLNRHLARAYNYGSGVTFG 86 (415)
Q Consensus 8 ~~~aVILAaG~g~Rl~plt~~~pK~llpv~g~~pli~~~l~~l~~~gi-~~I~vv~~~~~~~i~~~l~~~~~~~~~~~~~ 86 (415)
++.|||||||.|+|| | ||+|+|++|+ |||+|+++.+.++|+ ++|+|++++ +.+.+++.+. +
T Consensus 2 ~~~aiIlA~G~~~R~-~-----~K~l~~i~g~-pli~~~i~~~~~~~~~~~ivvv~~~--~~i~~~~~~~---------~ 63 (245)
T 1h7e_A 2 KAVIVIPARYGSSRL-P-----GKPLLDIVGK-PMIQHVYERALQVAGVAEVWVATDD--PRVEQAVQAF---------G 63 (245)
T ss_dssp CEEEEEECCSCCSSS-T-----TGGGCEETTE-EHHHHHHHHHHTCTTCCEEEEEESC--HHHHHHHHHT---------T
T ss_pred CeEEEEEcCCcCCCC-C-----CCcccccCCc-hHHHHHHHHHHhCCCCCeEEEECCc--HHHHHHHHHc---------C
Confidence 588999999999999 5 9999999999 999999999999996 999999976 5676666431 1
Q ss_pred CceEEEecCccCCCCCCCccccchHHHHHHhhhhhcCCCCCCcCeEEEEcCCee-c-ccChHHHHHHHHHc-CCcEEEEE
Q 014953 87 DGCVEVLAATQTPGEAGKRWFQGTADAVRQFHWLFEDPRNKVIEDVLILSGDHL-Y-RMDYMDFVQNHRQS-GADITISC 163 (415)
Q Consensus 87 ~~~v~i~~~~~~~~~~~~~~~~Gt~~al~~~~~~i~~~~~~~~~~~lv~~gD~i-~-~~~l~~~l~~h~~~-~~~~ti~~ 163 (415)
+.++...+. +..|+++++ .+...+. .+.+++++||.. . ..++..+++.|.+. ++++++.+
T Consensus 64 ---~~~~~~~~~-------~~~g~~~~~-~~~~~~~------~~~~lv~~~D~P~~~~~~i~~l~~~~~~~~~~~~~~~~ 126 (245)
T 1h7e_A 64 ---GKAIMTRND-------HESGTDRLV-EVMHKVE------ADIYINLQGDEPMIRPRDVETLLQGMRDDPALPVATLC 126 (245)
T ss_dssp ---CEEEECCSC-------CSSHHHHHH-HHHHHSC------CSEEEECCTTCTTCCHHHHHHHHHHHHHCTTCCEEEEE
T ss_pred ---CeEEeCCCc-------cCCcHHHHH-HHHHhCC------CCEEEEEcCCcCcCCHHHHHHHHHHHHhCCCCCEEEEe
Confidence 223222111 124776655 4444442 478999999993 3 44589999999887 77787777
Q ss_pred EEcCCCc--CCcccEEEECCCCCeEEEEEcCCcccccccccccccccccccccccccceeeeeEEEEeHHHHHHHHhhhC
Q 014953 164 LPMDDSR--ASDFGLMKINNEGRVLSFSEKPKGKDLKAMAVDTTVLGLSKQEAEEKPYIASMGVYLFKKEILLNLLRWRF 241 (415)
Q Consensus 164 ~~~~~~~--~~~~g~v~~d~~~~v~~~~ek~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Giyi~~~~~l~~~l~~~~ 241 (415)
.+..... ...+..+..+++|++..|.+++..... ++ ...+.+.++|+|+|+++.|..++ ..
T Consensus 127 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~r--------------~~-~~~~~~~~~g~y~~~~~~l~~~~-~~- 189 (245)
T 1h7e_A 127 HAISAAEAAEPSTVKVVVNTRQDALYFSRSPIPYPR--------------NA-EKARYLKHVGIYAYRRDVLQNYS-QL- 189 (245)
T ss_dssp EEECHHHHTCTTSCEEEECTTCBEEEEESSCSSCCT--------------TG-GGCCEEEEEEEEEEEHHHHHHGG-GS-
T ss_pred ecCCHHHhcCCCCcEEEECCCCcEEEeecCCCCCCc--------------cc-ccCceeEEEEEEEcCHHHHHHHH-hC-
Confidence 6662110 011222333678899999876543110 00 00124679999999999886654 21
Q ss_pred CCCCcccccchhhh---cccceEEEEEeCceEEecCCHHHHHHHHHhhc
Q 014953 242 PTANDFGSEIIPAS---ANEQFLKAYLFNDYWEDIGTIRSFFEANLALT 287 (415)
Q Consensus 242 ~~~~~~~~~~l~~l---~~~~~i~~~~~~g~~~di~t~~~y~~an~~~l 287 (415)
........+.++.+ ..+.++.++..+++|.||+||+||..|+..+.
T Consensus 190 ~~~~~~~td~~~~~~~~~~g~~v~~~~~~~~~~dIdtp~Dl~~a~~~l~ 238 (245)
T 1h7e_A 190 PESMPEQAESLEQLRLMNAGINIRTFEVAATGPGVDTPACLEKVRALMA 238 (245)
T ss_dssp CCCHHHHHHTCTTHHHHHTTCCEEEEECCCCCCCSSSHHHHHHHHHHHH
T ss_pred CCCccccchhhHHHHHHHCCCeEEEEEeCCCCCCCCCHHHHHHHHHHHH
Confidence 11111122444433 23679999999999999999999999987654
No 29
>4fcu_A 3-deoxy-manno-octulosonate cytidylyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.90A {Acinetobacter baumannii} PDB: 3pol_A
Probab=99.89 E-value=3e-22 Score=182.27 Aligned_cols=237 Identities=14% Similarity=0.151 Sum_probs=159.9
Q ss_pred eEEEEEcCCCCCcccccccCCcccceeeCCcceeehheh-hhhhccCCcEEEEEcccChhHHHHHHHhhccCCCCcccCC
Q 014953 9 VAAVILGGGAGTRLYPLTKQRAKPAVPIGGAYRLIDVPM-SNCINSGINKVYILTQYNSASLNRHLARAYNYGSGVTFGD 87 (415)
Q Consensus 9 ~~aVILAaG~g~Rl~plt~~~pK~llpv~g~~pli~~~l-~~l~~~gi~~I~vv~~~~~~~i~~~l~~~~~~~~~~~~~~ 87 (415)
..|||||+|.|+||. +|+|+|++|+ |||+|++ +.+.++++++|+|++++ +.+.+++.. ++.
T Consensus 2 ~~aiIlA~G~stR~~------~K~L~~i~Gk-Pli~~~i~~~~~~~~~~~vvVvt~~--~~i~~~~~~---------~g~ 63 (253)
T 4fcu_A 2 KHIVIPARFSSSRLP------GKPLLLIHDR-PMILRVVDQAKKVEGFDDLCVATDD--ERIAEICRA---------EGV 63 (253)
T ss_dssp EEEEEECCSCCTTST------TGGGSEETTE-EHHHHHHHHHHTCTTCCEEEEEESC--HHHHHHHHT---------TTC
T ss_pred eEEEEEeCCCCCCCC------CCceeeECCe-EhHHHHHHHHHHhcCCCEEEEECCH--HHHHHHHHH---------cCC
Confidence 469999999999995 5999999999 9999999 99999999999999963 667666542 111
Q ss_pred ceEEEecCccCCCCCCCccccchHHHHHHhhhhhcCCCCCCcCeEEEEcCCe-ecc-cChHHHHHHHHHc-CCcEEEEEE
Q 014953 88 GCVEVLAATQTPGEAGKRWFQGTADAVRQFHWLFEDPRNKVIEDVLILSGDH-LYR-MDYMDFVQNHRQS-GADITISCL 164 (415)
Q Consensus 88 ~~v~i~~~~~~~~~~~~~~~~Gt~~al~~~~~~i~~~~~~~~~~~lv~~gD~-i~~-~~l~~~l~~h~~~-~~~~ti~~~ 164 (415)
. ++...+. ...|+ +++..++..+.. ...+.|+++.||. +.. ..+..+++.|.+. ++.++.++.
T Consensus 64 ~---v~~~~~~-------~~~Gt-~~i~~a~~~~~~---~~~d~vlv~~gD~Pli~~~~i~~li~~~~~~~~~~~at~~~ 129 (253)
T 4fcu_A 64 D---VVLTSAD-------HPSGT-DRLSEVARIKGW---DADDIIVNVQGDEPLLPAQLVQQVAKLLVDKPNCSMSTLCE 129 (253)
T ss_dssp C---EEECCTT-------CCCHH-HHHHHHHHHHTC---CTTCEEEECCTTCTTCCHHHHHHHHHHHHHCTTCSEEEEEE
T ss_pred e---EEEeCCC-------CCChH-HHHHHHHHhcCc---CCCCEEEEEeCCcccCCHHHHHHHHHHHHhCCCCCEEEEeE
Confidence 1 2111111 12476 478888777742 1147899999999 554 4589999999876 344444444
Q ss_pred EcCC----CcCCcccEEEECCCCCeEEEEEcCCcccccccccccccccccccccccccceeeeeEEEEeHHHHHHHHhhh
Q 014953 165 PMDD----SRASDFGLMKINNEGRVLSFSEKPKGKDLKAMAVDTTVLGLSKQEAEEKPYIASMGVYLFKKEILLNLLRWR 240 (415)
Q Consensus 165 ~~~~----~~~~~~g~v~~d~~~~v~~~~ek~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Giyi~~~~~l~~~l~~~ 240 (415)
+..+ .++..+ .+..|++|+++.|.++|-......... .++.....++.++|+|+|++++|..+...
T Consensus 130 ~~~~~~~~~~p~~~-kvv~d~~g~~l~fsr~~ip~~r~~~~~--------~~~~~~~~~~~~~GiY~f~~~~l~~~~~~- 199 (253)
T 4fcu_A 130 PIHALDEFQRDSIV-KVVMSKQNEALYFSRATIPYDRDGAKR--------DEPTLHTQAFRHLGLYAYRVSLLQEYVTW- 199 (253)
T ss_dssp ECCCHHHHHCTTSC-EEEECTTSBEEEEESSCCSCCTTTSSS--------SSCCCCSCCEEEEEEEEEEHHHHHHHTTS-
T ss_pred EcCCHHHccCCCcc-EEEECCCCeEEEecCCCCCCCCCcccc--------cccccccceeEEEEEEEeCHHHHHHHHhC-
Confidence 4322 123443 457788999999999876432110000 00000124678999999999999876422
Q ss_pred CCCCCccc-ccch---hhhcccceEEEEEeCce-EEecCCHHHHHHHHHhhcCC
Q 014953 241 FPTANDFG-SEII---PASANEQFLKAYLFNDY-WEDIGTIRSFFEANLALTAH 289 (415)
Q Consensus 241 ~~~~~~~~-~~~l---~~l~~~~~i~~~~~~g~-~~di~t~~~y~~an~~~l~~ 289 (415)
+ ...+. .|.+ ..+-.+.+|+++..+++ |.+||||+||.+|++.+.+|
T Consensus 200 -~-~~~le~~e~le~lr~l~~G~~I~~~~~~~~~~~~IdtpeDL~~a~~~l~~r 251 (253)
T 4fcu_A 200 -E-MGKLEKLESLEQLRVLENGHRIAIAVAEANLPPGVDTQADLDRLNNMPVES 251 (253)
T ss_dssp -C-CCHHHHHHTCTTHHHHHTTCCEEEEECSSCCCCCCCSHHHHHHHHTSCGGG
T ss_pred -C-CCcccchhHHHHHHHHHCCCceEEEEeCCCCCCCCCCHHHHHHHHHHHHhh
Confidence 1 11221 1223 33345779999999999 99999999999999866543
No 30
>1vic_A 3-deoxy-manno-octulosonate cytidylyltransferase; structural genomics; 1.80A {Haemophilus influenzae} SCOP: c.68.1.13 PDB: 1vh3_A 3duv_A*
Probab=99.89 E-value=5e-22 Score=182.69 Aligned_cols=244 Identities=18% Similarity=0.237 Sum_probs=159.1
Q ss_pred ceEEEEEcCCCCCcccccccCCcccceeeCCcceeehhehhhhhccCCcEEEEEcccChhHHHHHHHhhccCCCCcccCC
Q 014953 8 TVAAVILGGGAGTRLYPLTKQRAKPAVPIGGAYRLIDVPMSNCINSGINKVYILTQYNSASLNRHLARAYNYGSGVTFGD 87 (415)
Q Consensus 8 ~~~aVILAaG~g~Rl~plt~~~pK~llpv~g~~pli~~~l~~l~~~gi~~I~vv~~~~~~~i~~~l~~~~~~~~~~~~~~ 87 (415)
++.|||||||.|+||. +|+|+|++|+ |||+|+++++.++++++|+|++++ +.+.+++.+ + +
T Consensus 2 ~~~aiIlA~G~g~R~~------~K~l~~~~gk-pli~~~l~~l~~~~~~~ivvv~~~--~~i~~~~~~-~--------~- 62 (262)
T 1vic_A 2 SFTVIIPARFASSRLP------GKPLADIKGK-PMIQHVFEKALQSGASRVIIATDN--ENVADVAKS-F--------G- 62 (262)
T ss_dssp CCEEEEECCCCCSSST------TGGGCEETTE-EHHHHHHHHHHHTTCSEEEEEESC--HHHHHHHHH-T--------T-
T ss_pred CcEEEEEcCCCCCCCC------CCccccCCCe-EHHHHHHHHHHhCCCceEEEECCc--HHHHHHHHh-c--------C-
Confidence 5789999999999994 4999999999 999999999999999999999975 456666643 1 1
Q ss_pred ceEEEecCccCCCCCCCccccchHHHHHHhhhhhcCCCCCCcCeEEEEcCCe-ec-ccChHHHHHHHHHcCCcEEEEEEE
Q 014953 88 GCVEVLAATQTPGEAGKRWFQGTADAVRQFHWLFEDPRNKVIEDVLILSGDH-LY-RMDYMDFVQNHRQSGADITISCLP 165 (415)
Q Consensus 88 ~~v~i~~~~~~~~~~~~~~~~Gt~~al~~~~~~i~~~~~~~~~~~lv~~gD~-i~-~~~l~~~l~~h~~~~~~~ti~~~~ 165 (415)
+.++...+. +..|++ .+..+...+.. ...+.|++++||. +. ..++..+++.|.+.++++++++.+
T Consensus 63 --~~~~~~~~~-------~~~g~~-~~~~~~~~l~~---~~~~~vlv~~~D~P~i~~~~i~~l~~~~~~~~~~~~~~~~~ 129 (262)
T 1vic_A 63 --AEVCMTSVN-------HNSGTE-RLAEVVEKLAI---PDNEIIVNIQGDEPLIPPVIVRQVADNLAKFNVNMASLAVK 129 (262)
T ss_dssp --CEEEECCCS-------SCCHHH-HHHHHHHHTTC---CTTCEEEECCTTCTTCCHHHHHHHHHHHHHHTCSEEEEEEE
T ss_pred --CEEEECCcc-------ccCChH-HHHHHHHHhcc---CCCCEEEEEeCCcCccCHHHHHHHHHHHHhcCCCEEEEEEe
Confidence 222221111 124665 45555555532 1147899999998 33 456899999998888888888887
Q ss_pred cCCCc---CCcccEEEECCCCCeEEEEEcCCcccccccccccccccccccccccccceeeeeEEEEeHHHHHHHHhhhCC
Q 014953 166 MDDSR---ASDFGLMKINNEGRVLSFSEKPKGKDLKAMAVDTTVLGLSKQEAEEKPYIASMGVYLFKKEILLNLLRWRFP 242 (415)
Q Consensus 166 ~~~~~---~~~~g~v~~d~~~~v~~~~ek~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Giyi~~~~~l~~~l~~~~~ 242 (415)
..+.. ...+..+..+++|++..|.+++..........+ ..-.+.+. -..+..++|+|+|+++++..+.... +
T Consensus 130 ~~~~~~~~~~~~~~~~~~~~g~v~~f~~~~~~~~r~~~~~~---~~~~~~~~-p~~~~~~~giy~~~~~~l~~~~~~~-~ 204 (262)
T 1vic_A 130 IHDAEELFNPNAVKVLTDKDGYVLYFSRSVIPYDRDQFMNL---QDVQKVQL-SDAYLRHIGIYAYRAGFIKQYVQWA-P 204 (262)
T ss_dssp CCCHHHHTCTTSCEEEECTTSBEEEEESSCSSCCHHHHTTC---SCGGGCCC-CTTCEEEEEEEEEEHHHHHHHHHSC-C
T ss_pred cCCHHHhcCCCceEEEECCCCCEeeeecCCCCcCCcccccc---cccccccc-ccceEEEEEEEEeeHHHHHHHHhCC-C
Confidence 76420 133455555778999999887532110000000 00000000 0125789999999999887543221 1
Q ss_pred CCCcccccchh--hhc-ccceEEEEEeC-ceEEecCCHHHHHHHHHhhcCC
Q 014953 243 TANDFGSEIIP--ASA-NEQFLKAYLFN-DYWEDIGTIRSFFEANLALTAH 289 (415)
Q Consensus 243 ~~~~~~~~~l~--~l~-~~~~i~~~~~~-g~~~di~t~~~y~~an~~~l~~ 289 (415)
...+. .++++ .++ .+.++.++..+ ++|.||+||+||..|+..+...
T Consensus 205 ~~~~~-~e~~~~~~~l~~g~~v~~~~~~~~~~~dI~tpeDl~~a~~~l~~~ 254 (262)
T 1vic_A 205 TQLEN-LEKLEQLRVLYNGERIHVELAKEVPAVGVDTAEDLEKVRAILAAN 254 (262)
T ss_dssp CHHHH-HHTCTTHHHHHTTCCEEEEECSSCCCCCCCSHHHHHHHHHHHHHT
T ss_pred Cchhh-hhhHHHHHHHHCCCeEEEEEeCCCCCCCCCCHHHHHHHHHHHHhc
Confidence 10000 11222 233 46799999998 7999999999999999887654
No 31
>2icy_A Probable UTP-glucose-1-phosphate uridylyltransferase 2; AT3G03250, UDP, putative UDP-glucose pyrophosphorylase; HET: UPG U5P; 1.64A {Arabidopsis thaliana} SCOP: b.81.1.4 c.68.1.5 PDB: 2icx_A* 1z90_A 2q4j_A
Probab=99.85 E-value=2.5e-20 Score=182.18 Aligned_cols=339 Identities=13% Similarity=0.159 Sum_probs=201.9
Q ss_pred cceEEEEEcCCCCCcccccccCCcccceeeC-Ccceeehhehhhhhcc----C--CcEEEEEcccChhHHHHHHHhhccC
Q 014953 7 RTVAAVILGGGAGTRLYPLTKQRAKPAVPIG-GAYRLIDVPMSNCINS----G--INKVYILTQYNSASLNRHLARAYNY 79 (415)
Q Consensus 7 ~~~~aVILAaG~g~Rl~plt~~~pK~llpv~-g~~pli~~~l~~l~~~----g--i~~I~vv~~~~~~~i~~~l~~~~~~ 79 (415)
.++.+||||||.||||+ .+.||+|+||. |+ |+|+++++++.+. | +.-+++...+..+.+.+|+.+...+
T Consensus 78 ~k~~vviLAGGlGTRLg---~~~PK~llpv~~gk-p~Le~~i~~l~~~~~~~G~~ip~vimts~~t~e~t~~~f~~~~~f 153 (469)
T 2icy_A 78 DKLVVLKLNGGLGTTMG---CTGPKSVIEVRDGL-TFLDLIVIQIENLNNKYGCKVPLVLMNSFNTHDDTHKIVEKYTNS 153 (469)
T ss_dssp TTEEEEEEECCBSGGGT---CCSBGGGSEEETTE-EHHHHHHHHHHHHHHHHSCCCCEEEEECTTTHHHHHHHHGGGTTS
T ss_pred ccceEEEEcCCccccCC---CCCCccccccCCCC-CHHHHHHHHHHHHHHhcCCCccEEEEeCCCCHHHHHHHHHhcccC
Confidence 67999999999999995 68999999999 99 9999999999887 5 5555566666688999999764323
Q ss_pred CCCcccCCceEEEecCcc-------------CCC--CCCCccccchHHHHHHh-----h-hhhcCCCCCCcCeEEEEcCC
Q 014953 80 GSGVTFGDGCVEVLAATQ-------------TPG--EAGKRWFQGTADAVRQF-----H-WLFEDPRNKVIEDVLILSGD 138 (415)
Q Consensus 80 ~~~~~~~~~~v~i~~~~~-------------~~~--~~~~~~~~Gt~~al~~~-----~-~~i~~~~~~~~~~~lv~~gD 138 (415)
+ .. +.++.... .+. ..-...+.|+|+++..+ + .+++. +.++|+|+++|
T Consensus 154 G------~~-I~~f~Q~~~P~i~~e~~~~l~~~~~~~~~e~~P~GtGG~~~~L~~sGll~~l~~~----G~e~~~V~n~D 222 (469)
T 2icy_A 154 N------VD-IHTFNQSKYPRVVADEFVPWPSKGKTDKEGWYPPGHGDVFPALMNSGKLDTFLSQ----GKEYVFVANSD 222 (469)
T ss_dssp S------SC-EEEEECCCEECEETTTTEEGGGGTCCSGGGEECCCGGGHHHHHHHHSHHHHHHTT----TCCEEEEEETT
T ss_pred C------ce-EEEEEecceeeEccccCccccCCCCCccccCCcCCchHHHHHHHhcCcHHHHHhc----CCCEEEEEECC
Confidence 2 21 22111000 000 00012467999998764 2 23321 25899999999
Q ss_pred eecccChHHHHHHHHHcCCcEEEEEEEcCCCcCCcccEEEECCCCC--eEEEEEcCCccccccccccccccccccccccc
Q 014953 139 HLYRMDYMDFVQNHRQSGADITISCLPMDDSRASDFGLMKINNEGR--VLSFSEKPKGKDLKAMAVDTTVLGLSKQEAEE 216 (415)
Q Consensus 139 ~i~~~~l~~~l~~h~~~~~~~ti~~~~~~~~~~~~~g~v~~d~~~~--v~~~~ek~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (415)
+++......++.+|.++++++++.+.+...+ ...||++... +|+ ++++.|+|...... . +. ..
T Consensus 223 nL~~~~d~~ll~~~~~~~a~~t~~v~~k~~~-~~~~Gvl~~~-dg~~~vvE~~e~p~~~~~e-~-----------k~-~~ 287 (469)
T 2icy_A 223 NLGAIVDLTILKHLIQNKNEYCMEVTPKTLA-DVKGGTLISY-EGKVQLLEIAQVPDEHVNE-F-----------KS-IE 287 (469)
T ss_dssp BTTCCCCHHHHHHHHHHTCSEEEEEEECCTT-CCSSCEEEEE-TTEEEEECGGGSCGGGHHH-H-----------HS-SS
T ss_pred cCCcccCHHHHHHHHHcCCCeeEEEEEeccC-CCceeEEEEE-CCEEEEEEEeccChhhhhh-h-----------cc-cc
Confidence 9987654589999999999999999887652 2568988753 455 44444555432100 0 00 01
Q ss_pred ccceeeeeEEEEeHHHHHHHHhhhC---CC--------------CCcccccchhhhcccceEEEEEeC-ceEEecCCHHH
Q 014953 217 KPYIASMGVYLFKKEILLNLLRWRF---PT--------------ANDFGSEIIPASANEQFLKAYLFN-DYWEDIGTIRS 278 (415)
Q Consensus 217 ~~~l~~~Giyi~~~~~l~~~l~~~~---~~--------------~~~~~~~~l~~l~~~~~i~~~~~~-g~~~di~t~~~ 278 (415)
..++.++|+|+|++++++.+++... +. .+.++.|+++.. .+..++.++ .+|.++.+..+
T Consensus 288 ~~~~~N~g~y~~~~~~L~~i~~~~~~~lp~~v~~K~id~~~~~klE~~~~D~~~~~---~~~~~~~V~R~~F~PvKn~~d 364 (469)
T 2icy_A 288 KFKIFNTNNLWVNLKAIKKLVEADALKMEIIPNPKEVDGVKVLQLETAAGAAIRFF---DNAIGVNVPRSRFLPVKASSD 364 (469)
T ss_dssp SCCEEEEEEEEEEHHHHHHHHHTTCCCCCCBCCEEEETTEEEECCBCCGGGGGGGS---TTCEEEECCGGGCCBCCSHHH
T ss_pred ccceeeEEEEEEcHHHHHHHHhcccCCchhhccceecCCCceEeehHhhHHHHHhc---CCeEEEEechhHcCcCCCHHH
Confidence 2356799999999999988776521 10 112223333221 234555553 47999999999
Q ss_pred HHHHHHhhcCCCCCCCccCCCCCccccCccCCCeeecC--Ccccc--ceE-CCCCEEcceEEeeeEEccCcEECCCcEEe
Q 014953 279 FFEANLALTAHPPMFSFYDATKPIYTSRRNLPPSKIDD--SKIVD--SII-SHGSFITSSFIEHSVVGIRSRINANVHLK 353 (415)
Q Consensus 279 y~~an~~~l~~~~~~~~~~~~~~~~~~~~i~~~~~i~~--~~i~~--~~i-g~~~~I~~~~i~~svig~~~~ig~~~~i~ 353 (415)
|+.+..++...........+.. ...+.|-+.+.+ ..|.+ ... ..-+.++ ..+=.|--+++-|.++++.
T Consensus 365 ll~~~s~l~~~~~g~~~~~~~~----~~~~~P~v~l~~~~~~v~~f~~rf~~~p~~~~---~~~l~v~gdv~fg~~v~l~ 437 (469)
T 2icy_A 365 LLLVQSDLYTLVDGFVTRNKAR----TNPSNPSIELGPEFKKVATFLSRFKSIPSIVE---LDSLKVSGDVWFGSSIVLK 437 (469)
T ss_dssp HHHHHSTTEEEETTEEEECTTC----CSSSCCEEEECGGGCSHHHHHHTBSSCCBCTT---EEEEEEESEEEECSSCEEE
T ss_pred HHHHHHHHHHHhcCcEEecCcc----cCCCCCeEEcChhhhhHHHHHHhcCCCccccc---CCeEEEEeeeEEcCCcEEE
Confidence 9999987443221111111110 011122222211 11110 101 1111111 2233455577888888888
Q ss_pred ecEEeCCccccchhHHHhhhhCCCcceEeCCCCEEeeeEECCCeEE
Q 014953 354 DTMMLGADFYETDAEVASLLAEGRVPVGIGENTKIKYEQLKPICHI 399 (415)
Q Consensus 354 ~sii~~~~~~~~~~~~~~~~~~~~~~~~Ig~~~~i~~~~i~~~~~i 399 (415)
+.++.... +| .+..|-+|++++|.++..+..|
T Consensus 438 G~v~i~~~-------------~~-~~~~ip~g~~l~~~~~~~~~~~ 469 (469)
T 2icy_A 438 GKVTVAAK-------------SG-VKLEIPDRAVVENKNINGPEDL 469 (469)
T ss_dssp EEEEEECC-------------TT-CEEEECTTCEEESCEECCC---
T ss_pred EEEEEEcC-------------CC-CeeecCCCCEeecceeeccCCC
Confidence 86665541 11 1256889999988877766543
No 32
>3f1c_A Putative 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 2; structural genomics, PSI-2, protein structure initiative; 2.30A {Listeria monocytogenes str} SCOP: c.68.1.0
Probab=99.85 E-value=8e-21 Score=172.89 Aligned_cols=229 Identities=13% Similarity=0.105 Sum_probs=147.0
Q ss_pred ccceEEEEEcCCCCCcccccccCCcccceeeCCcceeehhehhhhhccC-CcEEEEEcccChhH-HHHHHHhhccCCCCc
Q 014953 6 ARTVAAVILGGGAGTRLYPLTKQRAKPAVPIGGAYRLIDVPMSNCINSG-INKVYILTQYNSAS-LNRHLARAYNYGSGV 83 (415)
Q Consensus 6 ~~~~~aVILAaG~g~Rl~plt~~~pK~llpv~g~~pli~~~l~~l~~~g-i~~I~vv~~~~~~~-i~~~l~~~~~~~~~~ 83 (415)
|+++.|||||||.|+||++ .++||+|+|++|+ |||+|+++++.+++ +++|+|++++.... +.+.+.. +...
T Consensus 1 M~~~~aIIlAaG~g~Rm~~--~~~pK~l~~l~Gk-pll~~~l~~~~~~~~~~~ivvv~~~~~~~~~~~~~~~-~~~~--- 73 (246)
T 3f1c_A 1 MSLIYAQILAGGKGTRMGN--VSMPKQFLPLNGK-PIIVHTVEKFILNTRFDKILISSPKEWMNHAEDNIKK-YISD--- 73 (246)
T ss_dssp -CCEEEEEECC-----C-C--SSCCGGGSEETTE-EHHHHHHHHHHTCTTCSEEEEEECGGGHHHHHHHHHH-HCCC---
T ss_pred CCccEEEEECCccccccCC--CCCCCeEEEECCe-eHHHHHHHHHHcCCCCCEEEEEeCHHHHHHHHHHHHH-hCCC---
Confidence 4568899999999999986 4789999999999 99999999999987 99999999977654 3333332 2111
Q ss_pred ccCCceEEEecCccCCCCCCCccccchHHHHHHhhhhhcCCC-CCCcCeEEEEcCCe-ec-ccChHHHHHHHHHcCCcEE
Q 014953 84 TFGDGCVEVLAATQTPGEAGKRWFQGTADAVRQFHWLFEDPR-NKVIEDVLILSGDH-LY-RMDYMDFVQNHRQSGADIT 160 (415)
Q Consensus 84 ~~~~~~v~i~~~~~~~~~~~~~~~~Gt~~al~~~~~~i~~~~-~~~~~~~lv~~gD~-i~-~~~l~~~l~~h~~~~~~~t 160 (415)
..+.++.. + .+..++++.++.++.+.. ....+.+++++||. +. ...+..+++.|.+.++.
T Consensus 74 ----~~~~~~~~-~----------~~~~~sv~~al~~l~~~~~~~~~~~vlv~~~d~Pli~~~~i~~li~~~~~~~a~-- 136 (246)
T 3f1c_A 74 ----DRIVVIEG-G----------EDRNETIMNGIRFVEKTYGLTDDDIIVTHDAVRPFLTHRIIEENIDAALETGAV-- 136 (246)
T ss_dssp ----TTEEEEEC-C----------SSHHHHHHHHHHHHHHHTCCCTTCEEEEEETTCTTCCHHHHHHHHHHHHHTSEE--
T ss_pred ----CCEEEECC-C----------CchHHHHHHHHHHHhhhhcCCCCCEEEEecCcccCCCHHHHHHHHHHHHhcCCE--
Confidence 11333321 1 367889999988875200 00147899999998 43 44589999999887654
Q ss_pred EEEEEcCCCcCCcccEEEECCCCCeEEEEEcCCcccccccccccccccccccccccccceeeeeEEEEeHHHHHHHHhhh
Q 014953 161 ISCLPMDDSRASDFGLMKINNEGRVLSFSEKPKGKDLKAMAVDTTVLGLSKQEAEEKPYIASMGVYLFKKEILLNLLRWR 240 (415)
Q Consensus 161 i~~~~~~~~~~~~~g~v~~d~~~~v~~~~ek~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Giyi~~~~~l~~~l~~~ 240 (415)
+.+.+..+ .++..++++.+..+.+++... ..-.-++|+.+.|...++..
T Consensus 137 i~~~~~~d------~i~~~~~~~~v~~~~~r~~l~-------------------------~~qtpq~f~~~~L~~a~~~~ 185 (246)
T 3f1c_A 137 DTVIEALD------TIVESSNHEVITDIPVRDHMY-------------------------QGQTPQSFNMKKVFNHYQNL 185 (246)
T ss_dssp EEEEECSS------CEEECSSSSBCCBCCCGGGEE-------------------------EEEEEEEEEHHHHHHHHHTS
T ss_pred EEEEeccc------eEEEecCCCeEEEecChHHhh-------------------------hhcCCceeEHHHHHHHHHHH
Confidence 34444433 233444445555554443211 11234689988887776543
Q ss_pred CCCCCcccccchhhhc-ccceEEEEEeCceEEecCCHHHHHHHHHhhcCC
Q 014953 241 FPTANDFGSEIIPASA-NEQFLKAYLFNDYWEDIGTIRSFFEANLALTAH 289 (415)
Q Consensus 241 ~~~~~~~~~~~l~~l~-~~~~i~~~~~~g~~~di~t~~~y~~an~~~l~~ 289 (415)
.........|.+..+. .+.++..++.+.+|.+|+||+||..|+..+.++
T Consensus 186 ~~~~~~~~TD~~~~~~~~g~~v~~v~~~~~~~~Itt~~Dl~~ae~~l~~~ 235 (246)
T 3f1c_A 186 TPEKKQILTDACKICLLAGDDVKLVKGEIFNIKITTPYDLKVANAIIQER 235 (246)
T ss_dssp CHHHHHHCCCHHHHHHHTTCCCEEEECCTTCCCCCSHHHHHHHHHHHHHH
T ss_pred HHcCCCccCcHHHHHHHcCCCEEEEeCCCCccCcCCHHHHHHHHHHHhcc
Confidence 1111112234443333 356899999999999999999999999877654
No 33
>2vsh_A TARI, 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; nucleotidyltransferase; HET: 1PE PG4 P6G; 2.00A {Streptococcus pneumoniae} PDB: 2vsi_A*
Probab=99.85 E-value=8.9e-21 Score=171.47 Aligned_cols=224 Identities=11% Similarity=0.066 Sum_probs=138.0
Q ss_pred eEEEEEcCCCCCcccccccCCcccceeeCCcceeehhehhhhhcc-CCcEEEEEcccCh-hHHHHHHHhhccCCCCcccC
Q 014953 9 VAAVILGGGAGTRLYPLTKQRAKPAVPIGGAYRLIDVPMSNCINS-GINKVYILTQYNS-ASLNRHLARAYNYGSGVTFG 86 (415)
Q Consensus 9 ~~aVILAaG~g~Rl~plt~~~pK~llpv~g~~pli~~~l~~l~~~-gi~~I~vv~~~~~-~~i~~~l~~~~~~~~~~~~~ 86 (415)
|.|||||||.|+||++ ..+||+|+|++|+ |||+|+++++.++ ++++|+|++++.. +.+.+++.. + +..+.
T Consensus 3 ~~~iIlA~G~g~R~~~--~~~~K~l~~i~g~-pli~~~l~~l~~~~~~~~i~vv~~~~~~~~~~~~~~~-~----~~~~~ 74 (236)
T 2vsh_A 3 IYAGILAGGTGTRMGI--SNLPKQFLELGDR-PILIHTIEKFVLEPSIEKIVVGVHGDWVSHAEDLVDK-Y----LPLYK 74 (236)
T ss_dssp EEEEEEEC-------------CGGGSEETTE-EHHHHHHHHHHTCTTCCCEEEEECGGGHHHHHHHHHH-H----CGGGG
T ss_pred eEEEEeCCccccccCC--CCCCCeeeeeCCc-cHHHHHHHHHHcCCCCCeEEEEeCHHHHHHHHHHHHh-c----ccccc
Confidence 7899999999999997 6789999999999 9999999999998 5999999999887 556665532 2 10111
Q ss_pred CceEEEecCccCCCCCCCccccchHHHHHHhhhhhcCCCCC--CcCeEEEEcCCe-ecc-cChHHHHHHHHHcCCcEEEE
Q 014953 87 DGCVEVLAATQTPGEAGKRWFQGTADAVRQFHWLFEDPRNK--VIEDVLILSGDH-LYR-MDYMDFVQNHRQSGADITIS 162 (415)
Q Consensus 87 ~~~v~i~~~~~~~~~~~~~~~~Gt~~al~~~~~~i~~~~~~--~~~~~lv~~gD~-i~~-~~l~~~l~~h~~~~~~~ti~ 162 (415)
........ ..|++++++.++.++... .. ..+.+++++||. ++. .++..+++.|.+.++ +++
T Consensus 75 -~~~~~~~~-----------~~~~~~~i~~~l~~~~~~-~~~~~~~~vlv~~~D~P~~~~~~i~~l~~~~~~~~~--~~~ 139 (236)
T 2vsh_A 75 -ERIIITKG-----------GADRNTSIKNIIEAIDAY-RPLTPEDIVVTHDSVRPFITLRMIQDNIQLAQNHDA--VDT 139 (236)
T ss_dssp -GGEEEEEC-----------CSSHHHHHHHHHHHHHHH-SCCCTTCEEEEEETTCTTCCHHHHHHHHHHHHHSSE--EEE
T ss_pred -CceEEECC-----------CCchHHHHHHHHHHHHhh-ccCCCCCEEEEecCCcccCCHHHHHHHHHHHHhcCc--EEE
Confidence 01222110 037889999988877310 00 036789999999 544 468999999987765 344
Q ss_pred EEEcCCCcCCcccEEEECCCC-CeEEEEEcCCcccccccccccccccccccccccccceeeeeEEEEeHHHHHHHHhhhC
Q 014953 163 CLPMDDSRASDFGLMKINNEG-RVLSFSEKPKGKDLKAMAVDTTVLGLSKQEAEEKPYIASMGVYLFKKEILLNLLRWRF 241 (415)
Q Consensus 163 ~~~~~~~~~~~~g~v~~d~~~-~v~~~~ek~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Giyi~~~~~l~~~l~~~~ 241 (415)
+.+..+ + +..+++| ++..+.+++.. ... ...|+|+++.+..+++...
T Consensus 140 ~~~~~~--~-----~~~~~~g~~~~~~~~~~~~------------------------~~~-~~p~~f~~~~l~~~~~~~~ 187 (236)
T 2vsh_A 140 VVEAVD--T-----IVESTNGQFITDIPNRAHL------------------------YQG-QTPQTFRCKDFMDLYGSLS 187 (236)
T ss_dssp EEECCS--C-----EEECSSSSBCCBCCCGGGE------------------------EEE-EEEEEEEHHHHHHHHHTCC
T ss_pred EEeccc--c-----EEEeCCCCeeeeecChHHh------------------------eee-cCCcEecHHHHHHHHHHHH
Confidence 445443 1 1223566 77666554211 111 2378899988876665321
Q ss_pred CCCCcccccchhhhcc-cceEEEEEeCceEEecCCHHHHHHHHHhhc
Q 014953 242 PTANDFGSEIIPASAN-EQFLKAYLFNDYWEDIGTIRSFFEANLALT 287 (415)
Q Consensus 242 ~~~~~~~~~~l~~l~~-~~~i~~~~~~g~~~di~t~~~y~~an~~~l 287 (415)
.....-..+.+..+.. +.++..+..+++|.||+||+||..|+..+.
T Consensus 188 ~~g~~~~~~~~~~l~~~~~~v~~~~~~~~~~dIdtpeDl~~a~~~~~ 234 (236)
T 2vsh_A 188 DEEKEILTDACKIFVIKGKDVALAKGEYSNLKITTVTDLKIAKSMIE 234 (236)
T ss_dssp HHHHHHCCSHHHHHHHTTCCEEEEECCTTCCCCCSHHHHHHHHHHTC
T ss_pred hcCCCcCCCHHHHHHHcCCCEEEEECCccccCcCCHHHHHHHHHHhh
Confidence 1000001222233222 457888998889999999999999987653
No 34
>1vgw_A 4-diphosphocytidyl-2C-methyl-D-erythritol synthas; structural genomics, transferase; 2.35A {Neisseria gonorrhoeae} SCOP: c.68.1.13 PDB: 1vgz_A
Probab=99.84 E-value=4.9e-20 Score=166.06 Aligned_cols=220 Identities=13% Similarity=0.114 Sum_probs=133.1
Q ss_pred cceEEEEEcCCCCCcccccccCCcccceeeCCcceeehhehhhhhccC-CcEEEEEcccChhHHHHHHHhhccCCCCccc
Q 014953 7 RTVAAVILGGGAGTRLYPLTKQRAKPAVPIGGAYRLIDVPMSNCINSG-INKVYILTQYNSASLNRHLARAYNYGSGVTF 85 (415)
Q Consensus 7 ~~~~aVILAaG~g~Rl~plt~~~pK~llpv~g~~pli~~~l~~l~~~g-i~~I~vv~~~~~~~i~~~l~~~~~~~~~~~~ 85 (415)
++|.|||||||.|+||++ ..||+|+|++|+ |||+|+++.+.+++ +++|+|++++..+.+.+ +.+.. .
T Consensus 5 ~~~~aiIlA~G~g~R~~~---~~~K~l~~~~gk-pli~~~l~~l~~~~~~~~ivvv~~~~~~~~~~-~~~~~-~------ 72 (231)
T 1vgw_A 5 RKNIALIPAAGIGVRFGA---DKPKQYVEIGSK-TVLEHVLGIFERHEAVDLTVVVVSPEDTFADK-VQTAF-P------ 72 (231)
T ss_dssp CCEEEEEECC-------------CCSCCEETTE-EHHHHHHHHHHTCTTCCEEEEECCTTCSTHHH-HHHHC-T------
T ss_pred CceEEEEEcccccccCCC---CCCceEeEECCe-EHHHHHHHHHHcCCCCCeEEEEECccHHHHHH-HHhcC-C------
Confidence 568999999999999985 579999999999 99999999999875 99999999987766665 43311 0
Q ss_pred CCceEEEecCccCCCCCCCccccchHHHHHHhhhhhcCCC-CCCcCeEEEEcCCe-eccc-ChHHHHHHHHHcCCcEEEE
Q 014953 86 GDGCVEVLAATQTPGEAGKRWFQGTADAVRQFHWLFEDPR-NKVIEDVLILSGDH-LYRM-DYMDFVQNHRQSGADITIS 162 (415)
Q Consensus 86 ~~~~v~i~~~~~~~~~~~~~~~~Gt~~al~~~~~~i~~~~-~~~~~~~lv~~gD~-i~~~-~l~~~l~~h~~~~~~~ti~ 162 (415)
..+.++. . ..|++++++.++..+.... ....+.+++++||. +.+. .+..+++.|.+.+.. .++
T Consensus 73 --~~i~~~~--~---------~~~~~~si~~~l~~~~~~~~~~~~~~vlv~~~D~p~~~~~~i~~l~~~~~~~~~~-~~~ 138 (231)
T 1vgw_A 73 --QVRVWKN--G---------GQTRAETVRNGVAKLLETGLAAETDNILVHDAARCCLPSEALARLIEQAGNAAEG-GIL 138 (231)
T ss_dssp --TSEEECC--C---------CSSHHHHHHHHHHHHHHHSSSCTTSEEEECCTTCTTCCHHHHHHHHHHHTTCTTC-EEE
T ss_pred --CceEEEc--C---------CCcHHHHHHHHHHHHhhhccCCCCCEEEEEcCCcccCCHHHHHHHHHHHhhcCCe-EEE
Confidence 1133331 1 1489999999988773100 00147899999998 4444 488999988765423 344
Q ss_pred EEEcCCCcCCcccEEEECCCCCeEEEEEcCCcccccccccccccccccccccccccceeeeeEEEEeHHHHHHHHhhhCC
Q 014953 163 CLPMDDSRASDFGLMKINNEGRVLSFSEKPKGKDLKAMAVDTTVLGLSKQEAEEKPYIASMGVYLFKKEILLNLLRWRFP 242 (415)
Q Consensus 163 ~~~~~~~~~~~~g~v~~d~~~~v~~~~ek~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Giyi~~~~~l~~~l~~~~~ 242 (415)
+.+..+ . .... ++|++....++ .. .... .+.|+|+.+.|..+++....
T Consensus 139 ~~~~~~--~----~~~~-~~g~i~~~~~~---~~---------------------~~~~-~~p~~f~~~~l~~~~~~~~~ 186 (231)
T 1vgw_A 139 AVPVAD--T----LKRA-ESGQISATVDR---SG---------------------LWQA-QTPQLFQAGLLHRALAAENL 186 (231)
T ss_dssp EEECCS--C----EEEE-SSSBEEEEECC---TT---------------------EEEE-EEEEEEEHHHHHHHHHC---
T ss_pred Eeeccc--c----eEEe-CCCceEecCCh---HH---------------------heee-eCCcEecHHHHHHHHHHHhh
Confidence 444433 1 1112 34555433211 10 0112 24889999888766653211
Q ss_pred CCCcccccchhhhcccceEEEEEeCceEEecCCHHHHHHHHHhh
Q 014953 243 TANDFGSEIIPASANEQFLKAYLFNDYWEDIGTIRSFFEANLAL 286 (415)
Q Consensus 243 ~~~~~~~~~l~~l~~~~~i~~~~~~g~~~di~t~~~y~~an~~~ 286 (415)
........++.. .+.++..+..++.|.||+||+||..|+..+
T Consensus 187 ~g~~~~~~~~~~--~~~~v~~v~~~~~~~dIdtpeDl~~a~~~l 228 (231)
T 1vgw_A 187 GGITDEASAVEK--LGVRPLLIQGDARNLKLTQPQDAYIVRLLL 228 (231)
T ss_dssp -CCCSHHHHHHT--TTCCCEEEECCTTCCCCCSHHHHHHHHHHC
T ss_pred cCCCcHHHHHHH--cCCCEEEEECCccccCcCCHHHHHHHHHHH
Confidence 110001112222 146788888778999999999999998754
No 35
>2xwl_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltran; transferase, MEP pathway; HET: CTP; 1.49A {Mycobacterium smegmatis} PDB: 2xwm_A*
Probab=99.84 E-value=2.2e-20 Score=167.37 Aligned_cols=214 Identities=18% Similarity=0.136 Sum_probs=146.8
Q ss_pred ceEEEEEcCCCCCcccccccCCcccceeeCCcceeehhehhhhhccC-CcEEEEEcccChhH-HHHHHHhhccCCCCccc
Q 014953 8 TVAAVILGGGAGTRLYPLTKQRAKPAVPIGGAYRLIDVPMSNCINSG-INKVYILTQYNSAS-LNRHLARAYNYGSGVTF 85 (415)
Q Consensus 8 ~~~aVILAaG~g~Rl~plt~~~pK~llpv~g~~pli~~~l~~l~~~g-i~~I~vv~~~~~~~-i~~~l~~~~~~~~~~~~ 85 (415)
+|.|||||||.|+||+ ...||+|+|++|+ |||+|+++.+.+++ +++|+|++++.... +.+++. + .
T Consensus 2 ~~~~vIlA~G~g~R~~---~~~~K~l~~~~g~-pli~~~l~~l~~~~~~~~i~vv~~~~~~~~~~~~~~-------~--~ 68 (223)
T 2xwl_A 2 ATVAVVPAAGSGERLR---AGRPKAFVTLGGT-PLLEHALSGLRASGVIDRIVIAVPPALTDESKLVFG-------G--E 68 (223)
T ss_dssp CEEEEEECCCCCGGGT---SSSCGGGSEETTE-EHHHHHHHHHHHHSCCSEEEEEECGGGHHHHHHHTC-------B--T
T ss_pred ceEEEEECCccCcccC---CCCCCeeeEECCe-EHHHHHHHHHhcCCCCCeEEEEEcccHHHHHHHHhc-------c--C
Confidence 5889999999999998 4689999999999 99999999999988 99999999987643 433321 0 0
Q ss_pred CCceEEEecCccCCCCCCCccccchHHHHHHhhhhhcCCCCCCcCeEEEEcCCe-eccc-ChHHHHHHHHHcCCcEEEEE
Q 014953 86 GDGCVEVLAATQTPGEAGKRWFQGTADAVRQFHWLFEDPRNKVIEDVLILSGDH-LYRM-DYMDFVQNHRQSGADITISC 163 (415)
Q Consensus 86 ~~~~v~i~~~~~~~~~~~~~~~~Gt~~al~~~~~~i~~~~~~~~~~~lv~~gD~-i~~~-~l~~~l~~h~~~~~~~ti~~ 163 (415)
.+.++.. . .+++++++.++..++. .+.+++++||. +.+. ++..+++.|. .+.+.++.+
T Consensus 69 ---~v~~~~~--~---------~~~~~~i~~al~~~~~-----~~~vlv~~~D~P~~~~~~i~~l~~~~~-~~~~~~i~~ 128 (223)
T 2xwl_A 69 ---DSVIVSG--G---------VDRTESVALALEAAGD-----AEFVLVHDAARALTPPALIARVVAALK-EGHSAVVPG 128 (223)
T ss_dssp ---TEEEEEC--C---------SSHHHHHHHHHTTCTT-----CSEEEECCTTCTTCCHHHHHHHHHHHH-HTCSEEEEE
T ss_pred ---CeEEEcC--C---------CCHHHHHHHHHHhcCC-----CCEEEEEcCCcccCCHHHHHHHHHHHh-hcCCeEEEE
Confidence 1333321 1 2678899988877621 47899999998 4444 5899999883 334566666
Q ss_pred EEcCCCcCCcccEEEECCCCCeEEEEEcCCcccccccccccccccccccccccccceeeeeEEEEeHHHHHHHHhhhCCC
Q 014953 164 LPMDDSRASDFGLMKINNEGRVLSFSEKPKGKDLKAMAVDTTVLGLSKQEAEEKPYIASMGVYLFKKEILLNLLRWRFPT 243 (415)
Q Consensus 164 ~~~~~~~~~~~g~v~~d~~~~v~~~~ek~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Giyi~~~~~l~~~l~~~~~~ 243 (415)
.+..+ +..+ .|++|++..+.+++.. ......|+|+++.+..+.+...
T Consensus 129 ~~~~d--~~~~----~~~~g~~~~~~e~~~l-------------------------~~~~~p~~f~~~~l~~~~~~~~-- 175 (223)
T 2xwl_A 129 LAPAD--TIKA----VDANGAVLGTPERAGL-------------------------RAVQTPQGFHADVLRRAYARAT-- 175 (223)
T ss_dssp ECCSS--CEEE----ECTTSBEEECCCGGGE-------------------------EEECSCEEEEHHHHHHHHTTCC--
T ss_pred Eeccc--ceEE----EcCCCcEEeecChHHh-------------------------eeeeCCcccCHHHHHHHHHHhh--
Confidence 65543 2222 3667888877665321 0112357889887766654321
Q ss_pred CCcccccchhhhcc-cceEEEEEeCceEEecCCHHHHHHHHHhhcC
Q 014953 244 ANDFGSEIIPASAN-EQFLKAYLFNDYWEDIGTIRSFFEANLALTA 288 (415)
Q Consensus 244 ~~~~~~~~l~~l~~-~~~i~~~~~~g~~~di~t~~~y~~an~~~l~ 288 (415)
..+..+....+.. +.++..++.+++|.||+||+||..|+..+.+
T Consensus 176 -~~~~~~~~~~~~~~~~~v~~~~~~~~~~dIdtpeDl~~a~~~l~~ 220 (223)
T 2xwl_A 176 -AGGVTDDASLVEQLGTPVQIVDGDPLAFKITTPLDLVLAEAVLAH 220 (223)
T ss_dssp -SCCCCCHHHHHHTTTCCCEEEECCGGGCCCCSHHHHHHHHHHHHH
T ss_pred -CCCCccHHHHHHHcCCCEEEEECCcccccccCHHHHHHHHHHHhh
Confidence 1122233332222 4678888888899999999999999876643
No 36
>2yc3_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltran chloroplastic; transferase, non-mevalonate-pathway, herbicide, allosteric P; HET: MW5; 1.40A {Arabidopsis thaliana} PDB: 2yc5_A* 1w77_A* 2ycm_A*
Probab=99.84 E-value=2.1e-20 Score=168.17 Aligned_cols=219 Identities=12% Similarity=0.106 Sum_probs=138.8
Q ss_pred cceEEEEEcCCCCCcccccccCCcccceeeCCcceeehhehhhhhcc-CCcEEEEEcccChhHHHHHHHhhccCCCCccc
Q 014953 7 RTVAAVILGGGAGTRLYPLTKQRAKPAVPIGGAYRLIDVPMSNCINS-GINKVYILTQYNSASLNRHLARAYNYGSGVTF 85 (415)
Q Consensus 7 ~~~~aVILAaG~g~Rl~plt~~~pK~llpv~g~~pli~~~l~~l~~~-gi~~I~vv~~~~~~~i~~~l~~~~~~~~~~~~ 85 (415)
+++.|||||||.|+||+ ...||+|+|++|+ |||+|+++.+.++ ++++|+|++++..+.+.+++... +
T Consensus 3 ~~~~aiIlAaG~g~R~~---~~~~K~l~~i~g~-pli~~~l~~l~~~~~~~~ivvv~~~~~~~~~~~~~~~--------~ 70 (228)
T 2yc3_A 3 KSVSVILLAGGQGKRMK---MSMPKQYIPLLGQ-PIALYSFFTFSRMPEVKEIVVVCDPFFRDIFEEYEES--------I 70 (228)
T ss_dssp TCEEEEEECCCCC----------CGGGSEETTE-EHHHHHHHHHHHCTTEEEEEEECCGGGHHHHHTTTTT--------S
T ss_pred cceEEEEECCccccccC---CCCCccEeEECCE-EHHHHHHHHHHcCCCCCeEEEEEChHHHHHHHHHHHh--------C
Confidence 46899999999999997 4579999999999 9999999999998 89999999998876665554321 1
Q ss_pred CCceEEEecCccCCCCCCCccccchHHHHHHhhhhhcCCCCCCcCeEEEEcCCe-ecc-cChHHHHHHHHHcCCcEEEEE
Q 014953 86 GDGCVEVLAATQTPGEAGKRWFQGTADAVRQFHWLFEDPRNKVIEDVLILSGDH-LYR-MDYMDFVQNHRQSGADITISC 163 (415)
Q Consensus 86 ~~~~v~i~~~~~~~~~~~~~~~~Gt~~al~~~~~~i~~~~~~~~~~~lv~~gD~-i~~-~~l~~~l~~h~~~~~~~ti~~ 163 (415)
+. .+.++.. . .|..++++.++.++.. ..+.++++.||. +.. .++..+++.|.+.++ ++++
T Consensus 71 ~~-~v~~~~~--~---------~~~~~sv~~al~~~~~----~~~~vl~~d~d~P~~~~~~i~~l~~~~~~~~~--~i~~ 132 (228)
T 2yc3_A 71 DV-DLSFAIP--G---------KERQDSVYSGLQEIDV----NSELVCIHDSARPLVNTEDVEKVLKDGSAVGA--AVLG 132 (228)
T ss_dssp SS-EEEEECC--C---------SSHHHHHHHHHTTSCT----TCSEEEEEETTCTTCCHHHHHHHHHHHHHHSE--EEEE
T ss_pred CC-cEEEECC--C---------CCHHHHHHHHHHhhcc----CCCEEEEecCCCccCCHHHHHHHHHHHHhcCc--eEEE
Confidence 11 1333321 1 3888999999887742 136789999997 444 458999998877654 4545
Q ss_pred EEcCCCcCCcccEEEECCCCCeEEEEEcCCcccccccccccccccccccccccccceeeeeEEEEeHHHHHHHHhhhCCC
Q 014953 164 LPMDDSRASDFGLMKINNEGRVLSFSEKPKGKDLKAMAVDTTVLGLSKQEAEEKPYIASMGVYLFKKEILLNLLRWRFPT 243 (415)
Q Consensus 164 ~~~~~~~~~~~g~v~~d~~~~v~~~~ek~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Giyi~~~~~l~~~l~~~~~~ 243 (415)
.+..+. +...++++.+..+.+++. .+...+ .|+|+.+.|...++.....
T Consensus 133 ~~~~~~------~~~~~~~~~v~~~~~~~~------------------------~~~~~~-~~~f~~~~l~~~~~~~~~~ 181 (228)
T 2yc3_A 133 VPAKAT------IKEVNSDSLVVKTLDRKT------------------------LWEMQT-PQVIKPELLKKGFELVKSE 181 (228)
T ss_dssp EECCSC------CCCBCTTSCBCCCCSCCC------------------------CEEEEE-EEEECHHHHHHHHHHHHHH
T ss_pred Eeccce------EEEEcCCCceEEecCccc------------------------eEEEeC-CcEEEHHHHHHHHHHHHhc
Confidence 554321 112244445543221110 122333 8999988776555431111
Q ss_pred CCcccccchhhhcc-cceEEEEEeCceEEecCCHHHHHHHHHhhc
Q 014953 244 ANDFGSEIIPASAN-EQFLKAYLFNDYWEDIGTIRSFFEANLALT 287 (415)
Q Consensus 244 ~~~~~~~~l~~l~~-~~~i~~~~~~g~~~di~t~~~y~~an~~~l 287 (415)
. ....+.+..+.+ +.++..+..+..|.||+||+||..|+..+.
T Consensus 182 ~-~~~~~~~~~l~~~g~~v~~~~~~~~~~dIdtpeDl~~a~~~l~ 225 (228)
T 2yc3_A 182 G-LEVTDDVSIVEYLKHPVYVSQGSYTNIKVTTPDDLLLAERILS 225 (228)
T ss_dssp T-CCCCSTTHHHHHSSSCCEEEECCTTCCCCCSHHHHHHHHHHHT
T ss_pred C-CCcccHHHHHHHcCCceEEEeCCccccCcCCHHHHHHHHHHHh
Confidence 1 112344433332 457766665668999999999999987654
No 37
>1ezi_A CMP-N-acetylneuraminic acid synthetase; homodimer, alpha-beta-alpha, transferase; 2.00A {Neisseria meningitidis} SCOP: c.68.1.13 PDB: 1eyr_A
Probab=99.84 E-value=3e-20 Score=167.15 Aligned_cols=217 Identities=16% Similarity=0.128 Sum_probs=145.6
Q ss_pred cceEEEEEcCCCCCcccccccCCcccceeeCCcceeehhehhhhhccC-CcEEEEEcccChhHHHHHHHhhccCCCCccc
Q 014953 7 RTVAAVILGGGAGTRLYPLTKQRAKPAVPIGGAYRLIDVPMSNCINSG-INKVYILTQYNSASLNRHLARAYNYGSGVTF 85 (415)
Q Consensus 7 ~~~~aVILAaG~g~Rl~plt~~~pK~llpv~g~~pli~~~l~~l~~~g-i~~I~vv~~~~~~~i~~~l~~~~~~~~~~~~ 85 (415)
+++.|||||||.|+||+ ||+|+|++|+ |||+|+++.+.+++ +++|+|++++ +.+.+++.+ + +
T Consensus 3 m~~~aiIlA~G~g~R~~------~K~l~~i~gk-pll~~~l~~~~~~~~~~~ivvv~~~--~~i~~~~~~-~--~----- 65 (228)
T 1ezi_A 3 KQNIAVILARQNSKGLP------LKNLRKMNGI-SLLGHTINAAISSKCFDRIIVSTDG--GLIAEEAKN-F--G----- 65 (228)
T ss_dssp CEEEEEEECCSSCSSST------TTTTCEETTE-EHHHHHHHHHHHHCCCSEEEEEESC--HHHHHHHHH-T--T-----
T ss_pred CceEEEEecCCCCCCCC------CcccceeCCc-CHHHHHHHHHHhCCCCCEEEEECCC--HHHHHHHHH-c--C-----
Confidence 35779999999999996 9999999999 99999999999988 7999999964 455555532 1 1
Q ss_pred CCceEEEecCccCCCCCCCccccchHHHHHHhhhhhcCCCCCCcCeEEEEcCCe-ec-ccChHHHHHHHHHcCCcEEEEE
Q 014953 86 GDGCVEVLAATQTPGEAGKRWFQGTADAVRQFHWLFEDPRNKVIEDVLILSGDH-LY-RMDYMDFVQNHRQSGADITISC 163 (415)
Q Consensus 86 ~~~~v~i~~~~~~~~~~~~~~~~Gt~~al~~~~~~i~~~~~~~~~~~lv~~gD~-i~-~~~l~~~l~~h~~~~~~~ti~~ 163 (415)
.. + +..+..-. ....|++++++.++..+.. ..+.+++++||. +. ..++..+++.|.+.++++++.+
T Consensus 66 -~~-~-~~~~~~~~-----~~~~g~~~sv~~~l~~~~~----~~d~vlv~~~D~P~~~~~~i~~l~~~~~~~~~~~~~~~ 133 (228)
T 1ezi_A 66 -VE-V-VLRPAELA-----SDTASSISGVIHALETIGS----NSGTVTLLQPTSPLRTGAHIREAFSLFDEKIKGSVVSA 133 (228)
T ss_dssp -CE-E-EECCC-----------CHHHHHHHHHHHHHTC----CSEEEEECCTTCTTCCHHHHHHHHTTCCTTTCCCEEEE
T ss_pred -CE-E-EeCchHHc-----CCCCChHHHHHHHHHHhCC----CCCEEEEEcCCCCcCCHHHHHHHHHHHHhcCCCEEEEE
Confidence 11 1 11111000 0124889999999988742 147899999998 33 3558899988877777778877
Q ss_pred EEcCCCcCCcccEEEECCCCCeEEEEEcCC-cccccccccccccccccccccccccceeeeeEEEEeHHHHHHHHhhhCC
Q 014953 164 LPMDDSRASDFGLMKINNEGRVLSFSEKPK-GKDLKAMAVDTTVLGLSKQEAEEKPYIASMGVYLFKKEILLNLLRWRFP 242 (415)
Q Consensus 164 ~~~~~~~~~~~g~v~~d~~~~v~~~~ek~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Giyi~~~~~l~~~l~~~~~ 242 (415)
.+..+. + ++....|++|++..+.+... .... +. ....+..++|+|+++++.+...+
T Consensus 134 ~~~~~~-p--~~~~~~~~~g~~~~~~~~~~~~~~~--------------~~-~~~~~~~~~giy~~~~~~l~~~~----- 190 (228)
T 1ezi_A 134 CPMEHH-P--LKTLLQINNGEYAPMRHLSDLEQPR--------------QQ-LPQAFRPNGAIYINDTASLIANN----- 190 (228)
T ss_dssp EECSSC-T--TSCEEECC--CEEESSCHHHHTCCG--------------GG-SCCEEEEEEEEEEEEHHHHHHHT-----
T ss_pred EecCCC-c--ceeeEEcCCCcEeeccccccccCCc--------------cc-CchhheeeeEEEEEeHHHHhhCC-----
Confidence 776541 2 33333467788888765211 0000 00 00123467899999998775321
Q ss_pred CCCcccccchhhhcccceEEEEEeC-ceEEecCCHHHHHHHHHhhc
Q 014953 243 TANDFGSEIIPASANEQFLKAYLFN-DYWEDIGTIRSFFEANLALT 287 (415)
Q Consensus 243 ~~~~~~~~~l~~l~~~~~i~~~~~~-g~~~di~t~~~y~~an~~~l 287 (415)
. ..+.++..+..+ .+|.||+||+||..|+..+.
T Consensus 191 -------~-----~~g~~v~~~~~~~~~~~dIdtpeDl~~a~~~l~ 224 (228)
T 1ezi_A 191 -------C-----FFIAPTKLYIMSHQDSIDIDTELDLQQAENILN 224 (228)
T ss_dssp -------S-----SCCSSCEEEECCTGGGCCCCSHHHHHHHHHHHC
T ss_pred -------c-----ccCCceEEEEeCcccccCCCCHHHHHHHHHHHH
Confidence 0 115677778776 58999999999999987654
No 38
>2dpw_A Hypothetical protein TTHA0179; transferase, structural genomics, NPPSFA, national project O structural and functional analyses; 2.90A {Thermus thermophilus} SCOP: c.68.1.19
Probab=99.80 E-value=9.7e-21 Score=170.84 Aligned_cols=200 Identities=14% Similarity=0.155 Sum_probs=135.7
Q ss_pred ceEEEEEcCCCCCcccccccCCcccceeeCCcceeehhehhhhhccCCcEEEEEcccChhHHHHHHHhhccCCCCcccCC
Q 014953 8 TVAAVILGGGAGTRLYPLTKQRAKPAVPIGGAYRLIDVPMSNCINSGINKVYILTQYNSASLNRHLARAYNYGSGVTFGD 87 (415)
Q Consensus 8 ~~~aVILAaG~g~Rl~plt~~~pK~llpv~g~~pli~~~l~~l~~~gi~~I~vv~~~~~~~i~~~l~~~~~~~~~~~~~~ 87 (415)
+|.|||||||. |||++.+...||+|+|++|+ |||+|+++.+..+++ +|+|++.+ +.+.+++
T Consensus 2 ~~~~vIlAaG~-tRl~~r~~~~~K~l~~i~g~-pll~~~l~~l~~~~~-~ivvv~~~--~~i~~~~-------------- 62 (232)
T 2dpw_A 2 RPSAIVLAGGK-EAWAERFGVGSKALVPYRGR-PMVEWVLEALYAAGL-SPVYVGEN--PGLVPAP-------------- 62 (232)
T ss_dssp CCEEEEECCCB-CSGGGTTTCSBGGGSEETTE-ETHHHHHHHHHHTTC-EEEEESCC--SSCSSCC--------------
T ss_pred ceeEEEECCCC-CccccccCCCCceeeEECCE-EHHHHHHHHHHhcCC-EEEEEeCh--HHHhhhc--------------
Confidence 58899999999 88877766689999999999 999999999999998 88887543 3322111
Q ss_pred ceEEEecCccCCCCCCCccccchHHHHHHhhhhhcCCCCCCcCeEEEEcCCe--ecccChHHHHHHHHHcCCcEEEEEEE
Q 014953 88 GCVEVLAATQTPGEAGKRWFQGTADAVRQFHWLFEDPRNKVIEDVLILSGDH--LYRMDYMDFVQNHRQSGADITISCLP 165 (415)
Q Consensus 88 ~~v~i~~~~~~~~~~~~~~~~Gt~~al~~~~~~i~~~~~~~~~~~lv~~gD~--i~~~~l~~~l~~h~~~~~~~ti~~~~ 165 (415)
.+.+ . . ..|++++++.++.++. +.|++++||+ +...++..+++ | +.++++++...+
T Consensus 63 -~~~~--~-~---------~~g~~~~i~~a~~~~~-------~~~lv~~~D~P~~~~~~i~~l~~-~-~~~~~~~~~~~~ 120 (232)
T 2dpw_A 63 -ALTL--P-D---------RGGLLENLEQALEHVE-------GRVLVATGDIPHLTEEAVRFVLD-K-APEAALVYPIVP 120 (232)
T ss_dssp -SEEE--C-C---------CSSHHHHHHHHHHTCC-------SEEEEEETTCTTCCHHHHHHHHH-H-CCSCSEEEEEEE
T ss_pred -CeEe--c-C---------CCCHHHHHHHHHHHcC-------CCEEEEeCCcccCCHHHHHHHHh-c-CCCCCEEEEEee
Confidence 1333 1 1 2599999999987762 6899999999 44556889998 6 566777777766
Q ss_pred cCCCcCCcccEEEECCCCCeEEEEEcCCcccccccccccccccccccccccccceeeeeEEEEeHHHHHHHHhhh-----
Q 014953 166 MDDSRASDFGLMKINNEGRVLSFSEKPKGKDLKAMAVDTTVLGLSKQEAEEKPYIASMGVYLFKKEILLNLLRWR----- 240 (415)
Q Consensus 166 ~~~~~~~~~g~v~~d~~~~v~~~~ek~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Giyi~~~~~l~~~l~~~----- 240 (415)
.++. ...|+.+ .+++..+.||| .+++|+|+|+++++..+.+..
T Consensus 121 ~~~~-~~~~~~~----~~~v~~~~ek~---------------------------~~~~g~~~~~~~~l~~~~~~~~~~~~ 168 (232)
T 2dpw_A 121 KEAV-EARFPRT----KRTYARLREGT---------------------------FTGGNLLLLDKSLFRKALPLARRVVA 168 (232)
T ss_dssp HHHH-HHHCTTC----CCCCEEETTEE---------------------------EEECSEEEEEHHHHTTTHHHHHHHHH
T ss_pred ccch-hhhCCCc----ceeEEEEecCc---------------------------eeeeeEEEEcHHHHHHHHHHHHHHHH
Confidence 4321 0223321 23455554432 367899999999876543311
Q ss_pred CCC-------------------CCcccccchhhhcc--cceEEEEEeC--ceEEecCCHHHHH
Q 014953 241 FPT-------------------ANDFGSEIIPASAN--EQFLKAYLFN--DYWEDIGTIRSFF 280 (415)
Q Consensus 241 ~~~-------------------~~~~~~~~l~~l~~--~~~i~~~~~~--g~~~di~t~~~y~ 280 (415)
... ......+++..+.. +.++..+..+ +.|.|||||+||.
T Consensus 169 ~~~~P~~~~~~~~~~~l~~~~~ge~~l~~~~~~~~~~~g~~v~~v~~~~~~~~~dIdtpeDl~ 231 (232)
T 2dpw_A 169 LRKRPLALARLVGWDVLLKLLLGRLSLAEVEARAQRILGVEARALVTPYPEVGVDVDREEDLV 231 (232)
T ss_dssp TTTCHHHHHHHHCHHHHHHHHHTCCCHHHHHHHHHHHHSSCEEEEECSCGGGTCCCCSHHHHC
T ss_pred hccCHHHHHHHHCHHHHHHHHhccCCHHHHHHHHHHHhCcEEEEEecCChhhccCCCChhhcc
Confidence 000 01122344444432 4688888884 6799999999984
No 39
>2i5k_A UTP--glucose-1-phosphate uridylyltransferase; LEFT-handed beta-helix, SGC domain; 3.10A {Saccharomyces cerevisiae}
Probab=99.80 E-value=2.5e-18 Score=169.14 Aligned_cols=339 Identities=12% Similarity=0.111 Sum_probs=199.0
Q ss_pred ccceEEEEEcCCCCCcccccccCCcccceeeC-Ccceeehhehhhhhcc----CCc-EEEEEcc-cChhHHHHHHHhhcc
Q 014953 6 ARTVAAVILGGGAGTRLYPLTKQRAKPAVPIG-GAYRLIDVPMSNCINS----GIN-KVYILTQ-YNSASLNRHLARAYN 78 (415)
Q Consensus 6 ~~~~~aVILAaG~g~Rl~plt~~~pK~llpv~-g~~pli~~~l~~l~~~----gi~-~I~vv~~-~~~~~i~~~l~~~~~ 78 (415)
..++.+||||||.||||+ .+.||+|+||+ |+ ||++|+++++... |+. .++|+++ +..+.+.+++.+...
T Consensus 90 ~~k~avViLAGG~GTRmg---s~~PK~l~~V~~gk-~~Le~~i~~i~~l~~~~G~~Ip~vImts~~t~e~t~~~~~~~~~ 165 (488)
T 2i5k_A 90 LSKLAVLKLNGGLGTSMG---CVGPKSVIEVREGN-TFLDLSVRQIEYLNRQYDSDVPLLLMNSFNTDKDTEHLIKKYSA 165 (488)
T ss_dssp GGGEEEEEECCCBSGGGT---CCSBSTTSCCBTTB-CHHHHHHHHHHHHHHHHTCCCEEEEECCTTTHHHHHHHHGGGCS
T ss_pred cCCceEEEEcCCCcccCC---CCCCccccccCCCC-cHHHHHHHHHHHhHHhcCCCccEEEEECCCCHHHHHHHHHhccc
Confidence 467889999999999998 78999999999 99 9999999999876 533 3666666 888999999976322
Q ss_pred CCCCcccCCceEEEecCccC---------------CCC--CCCccccchHHHHHHh-----hhhhcCCCCCCcCeEEEEc
Q 014953 79 YGSGVTFGDGCVEVLAATQT---------------PGE--AGKRWFQGTADAVRQF-----HWLFEDPRNKVIEDVLILS 136 (415)
Q Consensus 79 ~~~~~~~~~~~v~i~~~~~~---------------~~~--~~~~~~~Gt~~al~~~-----~~~i~~~~~~~~~~~lv~~ 136 (415)
++ .. +.++ .|. ... .-...+.|||+++... ++.+.. ...++++|++
T Consensus 166 fg------~~-i~~f--~Q~~~P~i~~d~~~~l~~~~~~~~~~~~P~GtGga~~~L~~sg~l~~l~~---~g~~~v~V~n 233 (488)
T 2i5k_A 166 NR------IR-IRSF--NQSRFPRVYKDSLLPVPTEYDSPLDAWYPPGHGDLFESLHVSGELDALIA---QGREILFVSN 233 (488)
T ss_dssp SS------CE-EEEE--CCCCEECEETTTCCBSCSSSSSCTTSEECCCGGGHHHHHHHHTHHHHHHH---TTCCEEEEEC
T ss_pred cC------ce-EEEE--EeCccceEccccceeeccCCCCCceeeecCCCchhhhhhhhcCcHHHHHh---cCCCEEEEEe
Confidence 22 11 2211 111 000 0012467999999733 344421 1258999999
Q ss_pred CCeecc-cChHHHHHHHHHcCCcEEEEEEEcCCCcCCcccEEEECCCCCeEEEEEcCCcccccccccccccccccccccc
Q 014953 137 GDHLYR-MDYMDFVQNHRQSGADITISCLPMDDSRASDFGLMKINNEGRVLSFSEKPKGKDLKAMAVDTTVLGLSKQEAE 215 (415)
Q Consensus 137 gD~i~~-~~l~~~l~~h~~~~~~~ti~~~~~~~~~~~~~g~v~~d~~~~v~~~~ek~~~~~~~~~~~~~~~~~~~~~~~~ 215 (415)
||+++. .|+. ++.+|.++++++++.+.+.+++ ...||.+..+ +|+ ..+.|..+.+....-.+ .. .
T Consensus 234 gDnL~~~~d~~-~L~~~~~~~a~~t~~v~~~~~p-~~~yG~Iv~~-dG~-~~iVE~~e~~~e~~~~~---------~~-~ 299 (488)
T 2i5k_A 234 GDNLGATVDLK-ILNHMIETGAEYIMELTDKTRA-DVKGGTLISY-DGQ-VRLLEVAQVPKEHIDEF---------KN-I 299 (488)
T ss_dssp TTBSSCCCCHH-HHHHHHHSCCSEEEEEEECCGG-GSSSCEEEEE-TTE-EEEECGGGSCTTSHHHH---------TC-T
T ss_pred CCcCCCcccHH-HHHHHHhcCCcEEEEEEEecCC-CCceeEEEEE-CCc-EEEEEeccCCHHHHhhc---------cc-c
Confidence 999776 4675 6799999999999999887652 2459988775 566 44554322221000000 00 0
Q ss_pred cccceeeeeEEEEeHHHHHHHHhhhC---CC------------------CCcccccchhhhcccceEEEEEeC-ceEEec
Q 014953 216 EKPYIASMGVYLFKKEILLNLLRWRF---PT------------------ANDFGSEIIPASANEQFLKAYLFN-DYWEDI 273 (415)
Q Consensus 216 ~~~~l~~~Giyi~~~~~l~~~l~~~~---~~------------------~~~~~~~~l~~l~~~~~i~~~~~~-g~~~di 273 (415)
......++|+|+|+.++|..+++... +. .+.|+.|+++.. + ...++.++ ..|..+
T Consensus 300 ~~~~~~Ntgi~~f~~~~L~~~l~~~~~~lp~~v~~K~i~~~~~~~~~~qlE~~~~d~~~~~-~--~~~~~~V~R~~F~Pv 376 (488)
T 2i5k_A 300 RKFTNFNTNNLWINLKAVKRLIESSNLEMEIIPNQKTITRDGHEINVLQLETACGAAIRHF-D--GAHGVVVPRSRFLPV 376 (488)
T ss_dssp TTCCEEEEEEEEEEHHHHHHHHHTTCCCCCCBCCEECCCC-----CEECCBCCGGGGGGGS-S--SCEEEEECGGGCCBC
T ss_pred cccCEEEEEEEEEeHHHHHHHHhhccCCCcceecCccccCCCCCCceEEeeehhhhHHhhc-c--CceEEEecccccccc
Confidence 12356799999999999988877521 10 012223333322 1 22334432 247888
Q ss_pred CCHHHHHHHHHhhcCCCCCCCccCCCCCccccCccCCCeeecC--Ccccc--ceECC-CCEEcceEEeeeEEccCcEECC
Q 014953 274 GTIRSFFEANLALTAHPPMFSFYDATKPIYTSRRNLPPSKIDD--SKIVD--SIISH-GSFITSSFIEHSVVGIRSRINA 348 (415)
Q Consensus 274 ~t~~~y~~an~~~l~~~~~~~~~~~~~~~~~~~~i~~~~~i~~--~~i~~--~~ig~-~~~I~~~~i~~svig~~~~ig~ 348 (415)
.+..+++.+..++...........+.. ..+.|-+.+.+ ..+++ ..+.. -..++ ...=.|--+++.|+
T Consensus 377 Kn~~~ll~~~~~~~~~~~g~~~~~~~~-----~e~~P~v~~~~~~~~~~~~~~rf~~~p~i~~---~~~l~v~Gdv~fg~ 448 (488)
T 2i5k_A 377 KTCSDLLLVKSDLFRLEHGSLKLDPSR-----FGPNPLIKLGSHFKKVSGFNARIPHIPKIVE---LDHLTITGNVFLGK 448 (488)
T ss_dssp CSHHHHHHHTSTTEEEETTEEEECTTC-----CSSCCEEEECGGGSSHHHHHHHCSSCCBCTT---EEEEEEESSEEECT
T ss_pred cCCccHHHHHHHHHHHhcCcEeecCCc-----CCCCCeEEECCcccchhhHHhhcCCCccccc---cceEEEEeeeEEcC
Confidence 888888777665432211111111110 11223333311 11111 11111 22222 12335555788888
Q ss_pred CcEEeecEEeCCccccchhHHHhhhhCCCcceEeCCCCEEeeeEECCCeEE
Q 014953 349 NVHLKDTMMLGADFYETDAEVASLLAEGRVPVGIGENTKIKYEQLKPICHI 399 (415)
Q Consensus 349 ~~~i~~sii~~~~~~~~~~~~~~~~~~~~~~~~Ig~~~~i~~~~i~~~~~i 399 (415)
++.+.++++.... -++ +..|-+|++++|.++..+..|
T Consensus 449 ~v~l~G~v~i~a~-----------~~~---~~~ip~g~~l~n~~~~~~~~~ 485 (488)
T 2i5k_A 449 DVTLRGTVIIVCS-----------DGH---KIDIPNGSILENVVVTGNLQI 485 (488)
T ss_dssp TCEEEEEEEEECC-----------TTC---CEEECTTCEEEEEEEEEEEEE
T ss_pred CcEEEEEEEEEcC-----------CCC---eEEeCCCCEEecceeeccccc
Confidence 9999887765431 011 267899999998877766665
No 40
>1qwj_A Cytidine monophospho-N-acetylneuraminic acid synthetase; CMP-5-N-acetylneuraminic acid synthetase, CMP-NEU5AC, sialic acid, glycosylation; HET: NCC; 2.80A {Mus musculus} SCOP: c.68.1.13
Probab=99.80 E-value=6.5e-19 Score=158.52 Aligned_cols=217 Identities=16% Similarity=0.186 Sum_probs=135.3
Q ss_pred cceEEEEEcCCCCCcccccccCCcccceeeCCcceeehhehhhhhccC-CcEEEEEcccChhHHHHHHHhhccCCCCccc
Q 014953 7 RTVAAVILGGGAGTRLYPLTKQRAKPAVPIGGAYRLIDVPMSNCINSG-INKVYILTQYNSASLNRHLARAYNYGSGVTF 85 (415)
Q Consensus 7 ~~~~aVILAaG~g~Rl~plt~~~pK~llpv~g~~pli~~~l~~l~~~g-i~~I~vv~~~~~~~i~~~l~~~~~~~~~~~~ 85 (415)
+++.|||||+|.|+||. +|+|+|++|+ |||+|+++.+.+++ +++|+|++. .+.+.+++.+ +
T Consensus 2 ~~~~aiIlA~G~s~R~~------~K~l~~i~Gk-pli~~~i~~~~~~~~~~~ivv~~~--~~~i~~~~~~-~-------- 63 (229)
T 1qwj_A 2 PHLAALVLARGGSKGIP------LKNIKRLAGV-PLIGWVLRAALDAGVFQSVWVSTD--HDEIENVAKQ-F-------- 63 (229)
T ss_dssp CCEEEEEECCSCCSSSS------CTTTSEETTE-EHHHHHHHHHHHHTCCSEEEEEES--CHHHHHHHHH-T--------
T ss_pred CcEEEEEEcCCCCCCCC------CcccceECCE-EHHHHHHHHHHhCCCcCEEEEECC--hHHHHHHHHH-c--------
Confidence 46889999999999994 5999999999 99999999999998 699999884 4566666542 1
Q ss_pred CCceEEEecCccCCCCCCCccccchHHHHHHhhhhhcCCCCCCcCeEEEEcCCe-ecc-cChHHHHHHHHHcCCcEEEEE
Q 014953 86 GDGCVEVLAATQTPGEAGKRWFQGTADAVRQFHWLFEDPRNKVIEDVLILSGDH-LYR-MDYMDFVQNHRQSGADITISC 163 (415)
Q Consensus 86 ~~~~v~i~~~~~~~~~~~~~~~~Gt~~al~~~~~~i~~~~~~~~~~~lv~~gD~-i~~-~~l~~~l~~h~~~~~~~ti~~ 163 (415)
+.. + +....... .+ ..+..++++.++..+.. .+.|++++||. +.+ .++..+++.|.+.+++.++.+
T Consensus 64 g~~-~-~~~~~~~~----~~-~~~~~~~v~~al~~~~~-----~d~vlv~~~D~Pli~~~~i~~l~~~~~~~~~~~~~~~ 131 (229)
T 1qwj_A 64 GAQ-V-HRRSSETS----KD-SSTSLDAIVEFLNYHNE-----VDIVGNIQATSPCLHPTDLQKVAEMIREEGYDSVFSV 131 (229)
T ss_dssp TCE-E-EECCGGGS----ST-TCCHHHHHHHHHTTCTT-----CSEEEEECTTCTTCCHHHHHHHHHHHHSSCCSEEEEE
T ss_pred CCE-E-EeChhhhc----CC-CCcHHHHHHHHHHhcCC-----CCEEEEecCCCCcCCHHHHHHHHHHHHhCCCCEEEEE
Confidence 111 1 22111100 00 12445888888876632 57899999999 444 458999999988877766555
Q ss_pred EEcCCCcCCcccEEEECCCCCeEEEEEcCCcccccccccccccccccccccccccceeeeeEEEEeHHHHHHHHhhhCCC
Q 014953 164 LPMDDSRASDFGLMKINNEGRVLSFSEKPKGKDLKAMAVDTTVLGLSKQEAEEKPYIASMGVYLFKKEILLNLLRWRFPT 243 (415)
Q Consensus 164 ~~~~~~~~~~~g~v~~d~~~~v~~~~ek~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Giyi~~~~~l~~~l~~~~~~ 243 (415)
.+..+ +..+++ .| + +..|.+++...... ..+.+.....+..++|+|+++++.| +.
T Consensus 132 ~~~~~--p~~~~v--~~--~-~~~~~~~~~~~~~~----------~~~~~~~~~~~~~n~giY~~~~~~l---~~----- 186 (229)
T 1qwj_A 132 VRRHQ--FRWSEI--QK--G-VREVTEPLNLNPAK----------RPRRQDWDGELYENGSFYFAKRHLI---EM----- 186 (229)
T ss_dssp EEECC--CEECCC--CS--S-TTCCCCBSSSBTTB----------CCCTTTSCCEEEEEEEEEEEEHHHH---HT-----
T ss_pred eeccC--hhHhhc--cc--c-cccccccccccccc----------ccCCCCCCceEEEeeEEEEEEHHHh---cc-----
Confidence 44332 233322 22 2 21122111100000 0000000013567999999999887 11
Q ss_pred CCcccccchhhhcccceEEEEEeC-ceEEecCCHHHHHHHHHhhcC
Q 014953 244 ANDFGSEIIPASANEQFLKAYLFN-DYWEDIGTIRSFFEANLALTA 288 (415)
Q Consensus 244 ~~~~~~~~l~~l~~~~~i~~~~~~-g~~~di~t~~~y~~an~~~l~ 288 (415)
.+..+..+..+..+ ++|.||+|++||..|+..+..
T Consensus 187 ----------~~~~g~~~~~~~~~~~~~~dIdt~~Dl~~a~~~~~~ 222 (229)
T 1qwj_A 187 ----------GYLQGGKMAYYEMRAEHSVDIDVDIDWPIAEQRVLR 222 (229)
T ss_dssp ----------TCSSCSSEEEEECCGGGCCCHHHHCSHHHHHHHHHH
T ss_pred ----------ccccCCeEEEEECCcccccCCCCHHHHHHHHHHHHH
Confidence 11233444332555 689999999999999887643
No 41
>1i52_A 4-diphosphocytidyl-2-C-methylerythritol synthase; cytidylyltransferase, deoxyxylulose-5-phosphate pathway (DXP isoprenoid biosynthesys, MEP; HET: CTP; 1.50A {Escherichia coli} SCOP: c.68.1.13 PDB: 1ini_A* 1inj_A 1vgt_A 1vgu_A 3n9w_A 1h3m_A
Probab=99.79 E-value=2.3e-18 Score=155.65 Aligned_cols=219 Identities=14% Similarity=0.130 Sum_probs=139.7
Q ss_pred ccceEEEEEcCCCCCcccccccCCcccceeeCCcceeehhehhhhhccC-CcEEEEEcccChhHHHHHHHhhccCCCCcc
Q 014953 6 ARTVAAVILGGGAGTRLYPLTKQRAKPAVPIGGAYRLIDVPMSNCINSG-INKVYILTQYNSASLNRHLARAYNYGSGVT 84 (415)
Q Consensus 6 ~~~~~aVILAaG~g~Rl~plt~~~pK~llpv~g~~pli~~~l~~l~~~g-i~~I~vv~~~~~~~i~~~l~~~~~~~~~~~ 84 (415)
+++|.|||||||.|+||+ ...||+|+|++|+ |||+|+++.+.+++ +++|+|++++..+.+.+ +..
T Consensus 5 ~~~~~~iIlA~G~g~R~~---~~~~K~l~~i~g~-pll~~~i~~l~~~~~~~~ivvv~~~~~~~~~~-~~~--------- 70 (236)
T 1i52_A 5 HLDVCAVVPAAGFGRRMQ---TECPKQYLSIGNQ-TILEHSVHALLAHPRVKRVVIAISPGDSRFAQ-LPL--------- 70 (236)
T ss_dssp CCCEEEEEEECCCCGGGC---CSSCGGGSEETTE-EHHHHHHHHHHTSTTEEEEEEEECTTCCSGGG-SGG---------
T ss_pred CCceeEEEECCcCccccC---CCCCcceeeECCE-EHHHHHHHHHHhCCCCCeEEEEeCccHHHHHH-HHh---------
Confidence 456899999999999997 4579999999999 99999999999887 89999999987655543 211
Q ss_pred cCCceEEEecCccCCCCCCCccccchHHHHHHhhhhhcCCCCCCcCeEEEEcCCe-eccc-ChHHHHHHHHHcCCcEEEE
Q 014953 85 FGDGCVEVLAATQTPGEAGKRWFQGTADAVRQFHWLFEDPRNKVIEDVLILSGDH-LYRM-DYMDFVQNHRQSGADITIS 162 (415)
Q Consensus 85 ~~~~~v~i~~~~~~~~~~~~~~~~Gt~~al~~~~~~i~~~~~~~~~~~lv~~gD~-i~~~-~l~~~l~~h~~~~~~~ti~ 162 (415)
++...+.++.. . .|+.++++.++..+.+ .+.+++++||. +.+. .+..+++.+.+.++.. +.
T Consensus 71 ~~~~~v~~~~~--~---------~g~~~~i~~al~~~~~-----~~~~lv~~~D~P~~~~~~i~~l~~~~~~~~~~~-~~ 133 (236)
T 1i52_A 71 ANHPQITVVDG--G---------DERADSVLAGLKAAGD-----AQWVLVHDAARPCLHQDDLARLLALSETSRTGG-IL 133 (236)
T ss_dssp GGCTTEEEEEC--C---------SSHHHHHHHHHHTSTT-----CSEEEECCTTCTTCCHHHHHHHHGGGGTCSSCE-EE
T ss_pred cCCCCEEEECC--C---------CCHHHHHHHHHHhcCC-----CCEEEEEcCccccCCHHHHHHHHHHHHhcCCeE-EE
Confidence 11111333321 1 3788999998877642 47899999998 4454 4788888776654232 33
Q ss_pred EEEcCCCcCCcccEEEECCC-CCeEEEEEcCCcccccccccccccccccccccccccceee-eeEEEEeHHHHHHHHhhh
Q 014953 163 CLPMDDSRASDFGLMKINNE-GRVLSFSEKPKGKDLKAMAVDTTVLGLSKQEAEEKPYIAS-MGVYLFKKEILLNLLRWR 240 (415)
Q Consensus 163 ~~~~~~~~~~~~g~v~~d~~-~~v~~~~ek~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~Giyi~~~~~l~~~l~~~ 240 (415)
+.+..+ . + ...+++ |++....+. ..+.. -+.++|+.+.+..+++..
T Consensus 134 ~~~~~~--~--~--~~~~~~~~~i~~~~~~--------------------------~~i~~~~~p~~f~~~~l~~~~~~~ 181 (236)
T 1i52_A 134 AAPVRD--T--M--KRAEPGKNAIAHTVDR--------------------------NGLWHALTPQFFPRELLHDCLTRA 181 (236)
T ss_dssp EEECCS--C--E--EEECTTSSSEEEEECC--------------------------TTCEEEEEEEEEEHHHHHHHHHHH
T ss_pred EEeccc--c--E--EEEcCCCCceeeccCh--------------------------HhheeeeCCceecHHHHHHHHHHH
Confidence 334332 1 1 112333 455432211 01111 255678887665555432
Q ss_pred CCCCCccc--ccchhhhcccceEEEEEeCceEEecCCHHHHHHHHHhhcCC
Q 014953 241 FPTANDFG--SEIIPASANEQFLKAYLFNDYWEDIGTIRSFFEANLALTAH 289 (415)
Q Consensus 241 ~~~~~~~~--~~~l~~l~~~~~i~~~~~~g~~~di~t~~~y~~an~~~l~~ 289 (415)
......+. ..++.. .+.++..+..++.|.||+||+||..|+..+.++
T Consensus 182 ~~~g~~~td~~~~~~~--~~~~v~~v~~~~~~~dIdtpeDl~~a~~~~~~~ 230 (236)
T 1i52_A 182 LNEGATITDEASALEY--CGFHPQLVEGRADNIKVTRPEDLALAEFYLTRT 230 (236)
T ss_dssp HHTTCCCCSHHHHHHH--TTCCCEEEECCTTCCCCCSHHHHHHHHHHHCC-
T ss_pred HhcCCCcccHHHHHHH--cCCCEEEEecCccccccCCHHHHHHHHHHHHHh
Confidence 11111111 112221 146788888888999999999999998876543
No 42
>3rsb_A Adenosylcobinamide-phosphate guanylyltransferase; pyrophosphorylase binding motif, pyrophosphorylase; HET: GTP; 2.80A {Methanocaldococcus jannaschii}
Probab=99.77 E-value=1.6e-18 Score=152.14 Aligned_cols=130 Identities=24% Similarity=0.331 Sum_probs=93.9
Q ss_pred eEEEEEcCCCCCcccccccCCcccceeeCCcceeehhehhhhhccCCcEEEEEcccChhHHHHHHHhhccCCCCcccCCc
Q 014953 9 VAAVILGGGAGTRLYPLTKQRAKPAVPIGGAYRLIDVPMSNCINSGINKVYILTQYNSASLNRHLARAYNYGSGVTFGDG 88 (415)
Q Consensus 9 ~~aVILAaG~g~Rl~plt~~~pK~llpv~g~~pli~~~l~~l~~~gi~~I~vv~~~~~~~i~~~l~~~~~~~~~~~~~~~ 88 (415)
|+|||||||.|+||+| .||+|+|++|+ |||+|+++++.++++++|+|++++..+.+.+++...+.+..
T Consensus 1 m~aiIlA~G~s~R~~~----~~K~l~~~~g~-pli~~~l~~l~~~~~~~v~vv~~~~~~~i~~~~~~~~~~~~------- 68 (196)
T 3rsb_A 1 MDALIMAGGKGTRMGG----VEKPLIKLCGR-CLIDYVVSPLLKSKVNNIFIATSPNTPKTKEYINSAYKDYK------- 68 (196)
T ss_dssp CEEEEEC----CGGGG----SCGGGCEETTE-EHHHHHHHHHHSSSCCCEEEECCTTCHHHHHHHHHHTTTTT-------
T ss_pred CEEEEECCCCCCcCCC----CCccEEEECCE-EHHHHHHHHHHHCCCCEEEEEeCCChHHHHHHHHhhccCCC-------
Confidence 6899999999999987 89999999999 99999999999999999999999998888888876432211
Q ss_pred eEEEecCccCCCCCCCccccchHHHHHHhhhhhcCCCCCCcCeEEEEcCCe--ecccChHHHHHHHHH-----cCCcEEE
Q 014953 89 CVEVLAATQTPGEAGKRWFQGTADAVRQFHWLFEDPRNKVIEDVLILSGDH--LYRMDYMDFVQNHRQ-----SGADITI 161 (415)
Q Consensus 89 ~v~i~~~~~~~~~~~~~~~~Gt~~al~~~~~~i~~~~~~~~~~~lv~~gD~--i~~~~l~~~l~~h~~-----~~~~~ti 161 (415)
.+.++... ..|++++++.++..+ .+.|++++||. +....+.++++.|.+ .+.+..+
T Consensus 69 ~~~~~~~~----------~~g~~~si~~al~~~-------~~~vlv~~~D~P~i~~~~i~~l~~~~~~~~~~~~~~~~~~ 131 (196)
T 3rsb_A 69 NIVVIDTS----------GKGYIEDLNECIGYF-------SEPFLVVSSDLINLKSKIINSIVDYFYCIKAKTPDVEALA 131 (196)
T ss_dssp EEEE------------------CCCCCTTTTTC-------SSCEEEEETTEESCCHHHHHHHHHHHHHHHTTCC--CEEE
T ss_pred CEEEEECC----------CCCcHHHHHHHHHhC-------CCCEEEEeCCcccCCHHHHHHHHHHHHhhhcccCCCceEE
Confidence 13333211 147888888887665 37999999999 344558999999987 5566666
Q ss_pred EEEEcC
Q 014953 162 SCLPMD 167 (415)
Q Consensus 162 ~~~~~~ 167 (415)
++.+..
T Consensus 132 ~~~p~~ 137 (196)
T 3rsb_A 132 VMIPKE 137 (196)
T ss_dssp EEEETT
T ss_pred EEEEcc
Confidence 666654
No 43
>2wee_A MOBA-related protein; unknown function; 1.65A {Mycobacterium tuberculosis H37RV} PDB: 2we9_A 2yes_A
Probab=99.75 E-value=4e-18 Score=149.56 Aligned_cols=121 Identities=14% Similarity=0.249 Sum_probs=89.7
Q ss_pred cceEEEEEcCCCCCcccccccCCcccceeeCCcceeehhehhhhhccCCcEEEEEcccChhHHHHHHHhhccCCCCcccC
Q 014953 7 RTVAAVILGGGAGTRLYPLTKQRAKPAVPIGGAYRLIDVPMSNCINSGINKVYILTQYNSASLNRHLARAYNYGSGVTFG 86 (415)
Q Consensus 7 ~~~~aVILAaG~g~Rl~plt~~~pK~llpv~g~~pli~~~l~~l~~~gi~~I~vv~~~~~~~i~~~l~~~~~~~~~~~~~ 86 (415)
++|.|||||||.|+||. .||+|+|++|+ |||+|+++++.++++++|+|++++..+.+.+++.. ++
T Consensus 4 ~~~~~iIlA~G~~~R~g-----~~K~l~~~~g~-pll~~~l~~l~~~~~~~i~vv~~~~~~~~~~~~~~---------~~ 68 (197)
T 2wee_A 4 TQITGVVLAAGRSNRLG-----TPKQLLPYRDT-TVLGATLDVARQAGFDQLILTLGGAASAVRAAMAL---------DG 68 (197)
T ss_dssp SEEEEEEEECCCCTTTS-----SCGGGSEETTE-EHHHHHHHHHHHTTCSEEEEEECTTHHHHHHHSCC---------TT
T ss_pred CceEEEEECCCCcccCC-----CCeEcCeeCCc-cHHHHHHHHHHhcCCCcEEEEeCCCHHHHHHHhcc---------CC
Confidence 45889999999999995 89999999999 99999999999999999999999887666655421 11
Q ss_pred CceEEEecCccCCCCCCCccccchHHHHHHhhhhhcCCCCCCcCeEEEEcCCe-ecc-cChHHHHHHHHHcCCcE
Q 014953 87 DGCVEVLAATQTPGEAGKRWFQGTADAVRQFHWLFEDPRNKVIEDVLILSGDH-LYR-MDYMDFVQNHRQSGADI 159 (415)
Q Consensus 87 ~~~v~i~~~~~~~~~~~~~~~~Gt~~al~~~~~~i~~~~~~~~~~~lv~~gD~-i~~-~~l~~~l~~h~~~~~~~ 159 (415)
+.++.... +..|++++++.++.++.. ..+.+++++||. +.+ ..+..+++. +.++++
T Consensus 69 ---~~~~~~~~--------~~~g~~~~i~~al~~~~~----~~~~vlv~~~D~P~~~~~~i~~l~~~--~~~~~i 126 (197)
T 2wee_A 69 ---TDVVVVED--------VERGCAASLRVALARVHP----RATGIVLMLGDQPQVAPATLRRIIDV--GPATEI 126 (197)
T ss_dssp ---SEEEECC------------CCHHHHHHHHTTSCT----TEEEEEEEETTCTTCCHHHHHHHHHH--GGGSSE
T ss_pred ---CEEEECCC--------cccCHHHHHHHHHHHhcc----cCCeEEEEeCCcCCCCHHHHHHHHhh--cCCCCE
Confidence 22332111 125899999999877631 147899999999 444 447888876 344443
No 44
>2waw_A MOBA relate protein; unknown function; HET: PGE; 1.60A {Mycobacterium SP}
Probab=99.74 E-value=1.7e-17 Score=145.77 Aligned_cols=187 Identities=12% Similarity=0.164 Sum_probs=126.4
Q ss_pred cceEEEEEcCCCCCcccccccCCcccceeeCCcceeehhehhhhhccCCcEEEEEcccChhHHHHHHHhhccCCCCcccC
Q 014953 7 RTVAAVILGGGAGTRLYPLTKQRAKPAVPIGGAYRLIDVPMSNCINSGINKVYILTQYNSASLNRHLARAYNYGSGVTFG 86 (415)
Q Consensus 7 ~~~~aVILAaG~g~Rl~plt~~~pK~llpv~g~~pli~~~l~~l~~~gi~~I~vv~~~~~~~i~~~l~~~~~~~~~~~~~ 86 (415)
+++.|||||||.|+||+ .||+|+|++|+ |||+|+++.+..+++++|+|++++..+++.+++.. ++
T Consensus 4 ~~~~~iIlA~G~~~R~g-----~~K~l~~~~g~-pli~~~l~~l~~~~~~~i~vv~~~~~~~~~~~~~~---------~~ 68 (199)
T 2waw_A 4 SRVTGVVLAAGYSRRLG-----TPKQLLPLGDT-TLLGATLAMARRCPFDQLIVTLGGAADEVLEKVEL---------DG 68 (199)
T ss_dssp CCEEEEEEESSCCTTTT-----SCGGGCEETTE-EHHHHHHHHHHTSSCSEEEEEECTTHHHHHHHSCC---------TT
T ss_pred CceEEEEECCCCCCCCC-----CCEEeCEeCcc-CHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHHhcc---------CC
Confidence 45899999999999996 79999999999 99999999999999999999999877666655421 11
Q ss_pred CceEEEecCccCCCCCCCccccchHHHHHHhhhhhcCCCCCCcCeEEEEcCCeec--ccChHHHHHHHHHcCCcEEEEEE
Q 014953 87 DGCVEVLAATQTPGEAGKRWFQGTADAVRQFHWLFEDPRNKVIEDVLILSGDHLY--RMDYMDFVQNHRQSGADITISCL 164 (415)
Q Consensus 87 ~~~v~i~~~~~~~~~~~~~~~~Gt~~al~~~~~~i~~~~~~~~~~~lv~~gD~i~--~~~l~~~l~~h~~~~~~~ti~~~ 164 (415)
+.++.... +..|++++++.++.++.. ..+.+++++||..+ ..++..+++. +.++++++...
T Consensus 69 ---~~~~~~~~--------~~~g~~~~i~~al~~~~~----~~~~vlv~~~D~P~~~~~~i~~l~~~--~~~~~~~~~~~ 131 (199)
T 2waw_A 69 ---LDIVLVDD--------AGLGCSSSLKSALTWVDP----TAEGIVLMLGDQPGITASAVASLIAG--GRGATIAVCEY 131 (199)
T ss_dssp ---SEEEECCC--------CCTTCCCHHHHHHHTSCT----TCSEEEEEETTCTTCCHHHHHHHHHH--HTTCSEEEEEE
T ss_pred ---CEEEECCC--------cccCHHHHHHHHHHhhhc----cCCeEEEEeCCcccCCHHHHHHHHhh--cCCCCEEEEec
Confidence 22332111 125889999999887731 14789999999943 4457888876 44444432211
Q ss_pred EcCCCcCCcccEEEECCCCCeEEEEEcCCcccccccccccccccccccccccccceeeeeEEEEeHHHHHHHHhhhCCCC
Q 014953 165 PMDDSRASDFGLMKINNEGRVLSFSEKPKGKDLKAMAVDTTVLGLSKQEAEEKPYIASMGVYLFKKEILLNLLRWRFPTA 244 (415)
Q Consensus 165 ~~~~~~~~~~g~v~~d~~~~v~~~~ek~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Giyi~~~~~l~~~l~~~~~~~ 244 (415)
+++ + . .-++|+++.+..+.. . ...
T Consensus 132 -----------------~g~-------~---~---------------------------~P~~~~~~~l~~~~~-~-~~~ 155 (199)
T 2waw_A 132 -----------------ANG-------I---G---------------------------HPFWVSRGVFGDLAE-L-HGD 155 (199)
T ss_dssp -----------------TTE-------E---E---------------------------EEEEEEGGGHHHHHT-C-SST
T ss_pred -----------------CCc-------c---c---------------------------CCEEEcHHHHHHHHh-c-CCC
Confidence 111 0 0 002667776655442 1 111
Q ss_pred Ccccccchhhhccc--ceEEEEEe-CceEEecCCHHHHHHHHHhh
Q 014953 245 NDFGSEIIPASANE--QFLKAYLF-NDYWEDIGTIRSFFEANLAL 286 (415)
Q Consensus 245 ~~~~~~~l~~l~~~--~~i~~~~~-~g~~~di~t~~~y~~an~~~ 286 (415)
. . +..++.. .++..++. .++|.||+||+||..++..+
T Consensus 156 ~----~-~~~~l~~~~~~v~~~~~~~~~~~dIdtpeDl~~~~~~~ 195 (199)
T 2waw_A 156 K----G-VWRLIESGRHGVRRIRVDADVPLDVDTWDDYERLLASV 195 (199)
T ss_dssp T----C-HHHHHHSSSSCEEEEECSSCCCCCCSSHHHHHHHHHHH
T ss_pred H----H-HHHHHHhCcccEEEEEcCcccccCCCCHHHHHHHHHHH
Confidence 1 1 2233332 46777777 46899999999999998765
No 45
>2px7_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; TTHA0171, ISPD_THET8, ISPD, structural genomics PSI; 2.20A {Thermus thermophilus HB8}
Probab=99.74 E-value=8.5e-18 Score=151.87 Aligned_cols=206 Identities=13% Similarity=0.054 Sum_probs=125.6
Q ss_pred ceEEEEEcCCCCCcccccccCCcccceeeCCcceeehhehhhhhccCCcEEEEEcccChhHHHHHHHhhccCCCCcccCC
Q 014953 8 TVAAVILGGGAGTRLYPLTKQRAKPAVPIGGAYRLIDVPMSNCINSGINKVYILTQYNSASLNRHLARAYNYGSGVTFGD 87 (415)
Q Consensus 8 ~~~aVILAaG~g~Rl~plt~~~pK~llpv~g~~pli~~~l~~l~~~gi~~I~vv~~~~~~~i~~~l~~~~~~~~~~~~~~ 87 (415)
++.|||||||.|+||++ . ||+|+|++|+ |||+|+++. ..++++|+|++++. +.+ + .. .
T Consensus 25 ~~~aiILAgG~s~Rm~~---~-~K~l~~i~gk-pli~~~l~~--~~~~~~ivvv~~~~---~~~-~------~~---~-- 82 (236)
T 2px7_A 25 EVSVLIPAAGNGLRLGR---G-PKAFLQVGGR-TLLEWTLAA--FRDAAEVLVALPPG---AEP-P------KG---L-- 82 (236)
T ss_dssp CCEEEEECCC----------C-CGGGCBCSSS-BHHHHHHHH--TTTCSEEEEEECTT---CCC-C------TT---C--
T ss_pred ceEEEEEcCCCCccCCC---C-CCeEEEECCE-EHHHHHHHh--cCCCCeEEEEeCHH---HHH-h------hc---C--
Confidence 45699999999999983 3 9999999999 999999999 67899999999851 111 1 10 0
Q ss_pred ceEEEecCccCCCCCCCccccchHHHHHHhhhhhcCCCCCCcCeEEEEcCCe-eccc-ChHHHHHHHHHcCCcEEEEEEE
Q 014953 88 GCVEVLAATQTPGEAGKRWFQGTADAVRQFHWLFEDPRNKVIEDVLILSGDH-LYRM-DYMDFVQNHRQSGADITISCLP 165 (415)
Q Consensus 88 ~~v~i~~~~~~~~~~~~~~~~Gt~~al~~~~~~i~~~~~~~~~~~lv~~gD~-i~~~-~l~~~l~~h~~~~~~~ti~~~~ 165 (415)
.+.++.. . .|+.++++.++..+. .+.+++++||. +++. .+..+++.+.+.++ .+.+.+
T Consensus 83 -~v~~~~~--~---------~~~~~~i~~al~~~~------~~~vlv~~~D~P~~~~~~i~~l~~~~~~~~~--~i~~~~ 142 (236)
T 2px7_A 83 -GAVFLEG--G---------ATRQASVARLLEAAS------LPLVLVHDVARPFVSRGLVARVLEAAQRSGA--AVPVLP 142 (236)
T ss_dssp -SCEEEEC--C---------SSHHHHHHHHHHHCC------SSEEEECCTTCCCCCHHHHHHHHHHHHHHSE--EEEEEE
T ss_pred -CcEEEeC--C---------CchHHHHHHHHHHcC------CCeEEEecCccccCCHHHHHHHHHHHHhcCC--eEEEEe
Confidence 1233211 1 367888988887764 37899999998 5454 47889988876543 344444
Q ss_pred cCCCcCCcccEEEECCCCCeEEEEEcCCcccccccccccccccccccccccccceeeeeEEEEeHHHHHHHHhhhCCCCC
Q 014953 166 MDDSRASDFGLMKINNEGRVLSFSEKPKGKDLKAMAVDTTVLGLSKQEAEEKPYIASMGVYLFKKEILLNLLRWRFPTAN 245 (415)
Q Consensus 166 ~~~~~~~~~g~v~~d~~~~v~~~~ek~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Giyi~~~~~l~~~l~~~~~~~~ 245 (415)
..+ ... ..+ +|++..+.++.. .+... ..++|+++.|..+++.......
T Consensus 143 ~~~--~~~----~~~-~G~v~~~~~~~~------------------------~~~~~-~~~~f~~~~l~~~~~~~~~~g~ 190 (236)
T 2px7_A 143 VPD--TLM----APE-GEAYGRVVPREA------------------------FRLVQ-TPQGFFTALLREAHAYARRKGL 190 (236)
T ss_dssp CCS--EEE----EEC-SSSCEEEECGGG------------------------CEEEC-SCEEEEHHHHHHHHHHHHHHTC
T ss_pred cCC--cEE----Eec-CCeEEecCChHh------------------------hcccc-CCeEEcHHHHHHHHHHHHhcCC
Confidence 433 111 124 677765543211 01222 2567888877655543211000
Q ss_pred cccccchhhhc-ccceEEEEEeCceEEecCCHHHHHHHHHhhcC
Q 014953 246 DFGSEIIPASA-NEQFLKAYLFNDYWEDIGTIRSFFEANLALTA 288 (415)
Q Consensus 246 ~~~~~~l~~l~-~~~~i~~~~~~g~~~di~t~~~y~~an~~~l~ 288 (415)
. ..+....+. .+.++..+..++.|.||+||+||..|+..+.+
T Consensus 191 ~-~~d~~~ll~~~~~~v~~v~~~~~~~dIdtpeDl~~a~~~l~~ 233 (236)
T 2px7_A 191 E-ASDDAQLVQALGYPVALVEGEATAFKITHPQDLVLAEALARV 233 (236)
T ss_dssp C-CSSHHHHHHHTTCCCEEEECCTTCCCCCSHHHHHHHHHHHTC
T ss_pred C-chhHHHHHHHcCCcEEEEECCccccCCCCHHHHHHHHHHHHh
Confidence 1 111111111 24578888888899999999999999876643
No 46
>3q80_A 2-C-methyl-D-erythritol 4-phosphate cytidyltransf; TB structural genomics consortium, TBSGC, rossman fold; HET: CDM; 2.00A {Mycobacterium tuberculosis} SCOP: c.68.1.0 PDB: 3q7u_A* 3okr_A 2xwn_A*
Probab=99.73 E-value=1.6e-16 Score=142.44 Aligned_cols=218 Identities=17% Similarity=0.169 Sum_probs=146.3
Q ss_pred cceEEEEEcCCCCCcccccccCCcccceeeCCcceeehhehhhhhccC-CcEEEEEcccCh-hHHHHHHHhhccCCCCcc
Q 014953 7 RTVAAVILGGGAGTRLYPLTKQRAKPAVPIGGAYRLIDVPMSNCINSG-INKVYILTQYNS-ASLNRHLARAYNYGSGVT 84 (415)
Q Consensus 7 ~~~~aVILAaG~g~Rl~plt~~~pK~llpv~g~~pli~~~l~~l~~~g-i~~I~vv~~~~~-~~i~~~l~~~~~~~~~~~ 84 (415)
.++.|||||||.|+||. ...||+|+|++|+ |||+|+++.+.+++ +++|+|++++.. +.+.+++..
T Consensus 6 ~~~~aIIlAaG~g~Rmg---~~~~K~l~~l~Gk-pll~~~l~~~~~~~~~~~ivVv~~~~~~~~~~~~~~~--------- 72 (231)
T 3q80_A 6 GEVVAIVPAAGSGERLA---VGVPKAFYQLDGQ-TLIERAVDGLLDSGVVDTVVVAVPADRTDEARQILGH--------- 72 (231)
T ss_dssp CCEEEEEECCCCCTTTC---SSSCGGGCEETTE-EHHHHHHHHHHHTSCCCEEEEEECGGGHHHHHHHHGG---------
T ss_pred CceEEEEECCCCCccCC---CCCCceEEEECCe-EHHHHHHHHHHhCCCCCeEEEECChHHHHHHHHHhcC---------
Confidence 36889999999999997 5689999999999 99999999999874 899999998876 444444321
Q ss_pred cCCceEEEecCccCCCCCCCccccchHHHHHHhhhhhcCCCCCCcCeEEEEcCCe-ecccC-hHHHHHHHHHcCCcEEEE
Q 014953 85 FGDGCVEVLAATQTPGEAGKRWFQGTADAVRQFHWLFEDPRNKVIEDVLILSGDH-LYRMD-YMDFVQNHRQSGADITIS 162 (415)
Q Consensus 85 ~~~~~v~i~~~~~~~~~~~~~~~~Gt~~al~~~~~~i~~~~~~~~~~~lv~~gD~-i~~~~-l~~~l~~h~~~~~~~ti~ 162 (415)
.+.++... .+..++++.++..+.+. ...+.++++.||. +...+ +..+++.+.+ +.+..+.
T Consensus 73 ----~v~~v~gg-----------~~r~~sv~~gl~~~~~~--~~~d~Vlv~~~d~Pli~~~~i~~li~~~~~-~~~~~i~ 134 (231)
T 3q80_A 73 ----RAMIVAGG-----------SNRTDTVNLALTVLSGT--AEPEFVLVHDAARALTPPALVARVVEALRD-GYAAVVP 134 (231)
T ss_dssp ----GCEEEECC-----------SSHHHHHHHHHGGGC-----CCSEEEECCTTCTTCCHHHHHHHHHHHHT-TCSEEEE
T ss_pred ----CeEEEcCC-----------CchHHHHHHHHHHhhhc--CCCCEEEEEcCCcCCCCHHHHHHHHHHHhh-cCCeEEE
Confidence 12232211 24578899998877531 0136899999999 55544 7888888765 2455666
Q ss_pred EEEcCCCcCCcccEEEECCCCCeEEEEEcCCcccccccccccccccccccccccccceeeeeEEEEeHHHHHHHHhhhCC
Q 014953 163 CLPMDDSRASDFGLMKINNEGRVLSFSEKPKGKDLKAMAVDTTVLGLSKQEAEEKPYIASMGVYLFKKEILLNLLRWRFP 242 (415)
Q Consensus 163 ~~~~~~~~~~~~g~v~~d~~~~v~~~~ek~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Giyi~~~~~l~~~l~~~~~ 242 (415)
..+..++ - ...+++|.|....+. .. -+.+.+ -+.|+.+.|...++....
T Consensus 135 ~~p~~dt--~----~~~~~~g~v~~~~~r---~~---------------------l~~~qT-Pq~F~~~~L~~a~~~~~~ 183 (231)
T 3q80_A 135 VLPLSDT--I----KAVDANGVVLGTPER---AG---------------------LRAVQT-PQGFTTDLLLRSYQRGSL 183 (231)
T ss_dssp EECCSSC--E----EEECTTSBEEECCCG---GG---------------------EEEECS-CEEEEHHHHHHHHHHHTC
T ss_pred EEeccCC--E----EEEcCCCcEEEecch---hh---------------------eEEEcC-CcEEEHHHHHHHHHHHHh
Confidence 6666552 1 124667777655321 11 133444 489999988877765432
Q ss_pred C-CCcccccchhhh-cccceEEEEEeCceEEecCCHHHHHHHHHhh
Q 014953 243 T-ANDFGSEIIPAS-ANEQFLKAYLFNDYWEDIGTIRSFFEANLAL 286 (415)
Q Consensus 243 ~-~~~~~~~~l~~l-~~~~~i~~~~~~g~~~di~t~~~y~~an~~~ 286 (415)
+ ......|-..-+ ..+.++..++-+..++.|++|+|+..|+..+
T Consensus 184 ~n~~~~~TD~~~~~~~~g~~v~~v~g~~~n~kIt~p~Dl~~ae~~l 229 (231)
T 3q80_A 184 DLPAAEYTDDASLVEHIGGQVQVVDGDPLAFKITTKLDLLLAQAIV 229 (231)
T ss_dssp -----CCSSSHHHHHHTTCCCEEEECCGGGCCCCSHHHHHHHHHHH
T ss_pred hcCCCCCCcHHHHHHHcCCcEEEEECCccccCcCCHHHHHHHHHHh
Confidence 1 111223333222 2367788877777789999999999998754
No 47
>1vpa_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltran; TM1393, JCSG, joint center for structural GENO PSI, protein structure initiative; HET: CTP; 2.67A {Thermotoga maritima} SCOP: c.68.1.13
Probab=99.72 E-value=1.7e-16 Score=143.04 Aligned_cols=212 Identities=17% Similarity=0.190 Sum_probs=133.9
Q ss_pred cceEEEEEcCCCCCcccccccCCcccceeeCCcceeehhehhhhhccC-CcEEEEEcccChhHH-HHHHHhhccCCCCcc
Q 014953 7 RTVAAVILGGGAGTRLYPLTKQRAKPAVPIGGAYRLIDVPMSNCINSG-INKVYILTQYNSASL-NRHLARAYNYGSGVT 84 (415)
Q Consensus 7 ~~~~aVILAaG~g~Rl~plt~~~pK~llpv~g~~pli~~~l~~l~~~g-i~~I~vv~~~~~~~i-~~~l~~~~~~~~~~~ 84 (415)
-.|.|||||||.|+||+ ...||+|+|++|+ |||+|+++++.+++ +++|+|++++..... .+++ .
T Consensus 12 ~~~~aiILAaG~s~Rm~---~~~~K~l~~i~Gk-pli~~~i~~l~~~~~~~~ivVv~~~~~~~~~~~~~------~---- 77 (234)
T 1vpa_A 12 HMNVAILLAAGKGERMS---ENVPKQFLEIEGR-MLFEYPLSTFLKSEAIDGVVIVTRREWFEVVEKRV------F---- 77 (234)
T ss_dssp CCEEEEEEECCCCGGGC---CSSCGGGCEETTE-ETTHHHHHHHHHCTTCSEEEEEECGGGHHHHHTTC------C----
T ss_pred ccCeEEEEcCcchhhcC---CCCCceEEEECCe-EHHHHHHHHHHcCCCCCeEEEEEChHHHHHHHHHh------c----
Confidence 35889999999999997 3579999999999 99999999999988 899999998876433 2211 1
Q ss_pred cCCceEEEecCccCCCCCCCccccchHHHHHHhhhhhcCCCCCCcCeEEEEcCCe-eccc-ChHHHHHHHHHcCCcEEEE
Q 014953 85 FGDGCVEVLAATQTPGEAGKRWFQGTADAVRQFHWLFEDPRNKVIEDVLILSGDH-LYRM-DYMDFVQNHRQSGADITIS 162 (415)
Q Consensus 85 ~~~~~v~i~~~~~~~~~~~~~~~~Gt~~al~~~~~~i~~~~~~~~~~~lv~~gD~-i~~~-~l~~~l~~h~~~~~~~ti~ 162 (415)
+.. .+... .. | .+..++++.++..+... ..+.+++++||. +... .+..+++.+.+.++ .++
T Consensus 78 ~~~-~~~~~---~g----g----~~~~~sv~~al~~~~~~---~~~~vlv~~~D~Pli~~~~i~~l~~~~~~~~~--~i~ 140 (234)
T 1vpa_A 78 HEK-VLGIV---EG----G----DTRSQSVRSALEFLEKF---SPSYVLVHDSARPFLRKKHVSEVLRRARETGA--ATL 140 (234)
T ss_dssp CTT-EEEEE---EC----C----SSHHHHHHHHHHHHGGG---CCSEEEEEETTSCCCCHHHHHHHHHHHHHHSE--EEE
T ss_pred cCC-ceEEe---CC----C----CcHHHHHHHHHHHhhhc---CCCEEEEecCcccCCCHHHHHHHHHHHHhcCC--EEE
Confidence 111 12110 00 0 13778888888777320 136788889998 4454 48889988876543 343
Q ss_pred EEEcCCCcCCcccEEEECCCCCeEEEEEcCCcccccccccccccccccccccccccceeeeeEEEEeHHHHHHHHhhhCC
Q 014953 163 CLPMDDSRASDFGLMKINNEGRVLSFSEKPKGKDLKAMAVDTTVLGLSKQEAEEKPYIASMGVYLFKKEILLNLLRWRFP 242 (415)
Q Consensus 163 ~~~~~~~~~~~~g~v~~d~~~~v~~~~ek~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Giyi~~~~~l~~~l~~~~~ 242 (415)
+.+..+. +...+.+| + .+.++.. .+..-.-++|+.+.+..+++...
T Consensus 141 ~~~~~~~------~~~~~~~g-v-~~~~r~~-------------------------~~~~~~p~~f~~~~l~~~~~~~~- 186 (234)
T 1vpa_A 141 ALKNSDA------LVRVENDR-I-EYIPRKG-------------------------VYRILTPQAFSYEILKKAHENGG- 186 (234)
T ss_dssp EEECCSE------EEEEETTE-E-EEECCTT-------------------------EEEEEEEEEEEHHHHHHHHTTCC-
T ss_pred EEecCCc------EEEECCCC-c-ccCChhH-------------------------eeeecCCccccHHHHHHHHHhcC-
Confidence 4444321 22234556 5 4443211 01111334788887766654310
Q ss_pred CCCcccccchhhhc-ccceEEEEEeCceEEecCCHHHHHHHHHhhc
Q 014953 243 TANDFGSEIIPASA-NEQFLKAYLFNDYWEDIGTIRSFFEANLALT 287 (415)
Q Consensus 243 ~~~~~~~~~l~~l~-~~~~i~~~~~~g~~~di~t~~~y~~an~~~l 287 (415)
...+....+. .+.++..+..++.|.||+||+||..|+..+.
T Consensus 187 ----~~~~~~~~~~~~g~~v~~v~~~~~~~dIdtpeDl~~a~~~l~ 228 (234)
T 1vpa_A 187 ----EWADDTEPVQKLGVKIALVEGDPLCFKVTFKEDLELARIIAR 228 (234)
T ss_dssp ----CCSSSHHHHHTTTCCCEEEECCGGGCCCCSTTHHHHHHHHHH
T ss_pred ----CCCcHHHHHHHcCCcEEEEECCchhcCCCCHHHHHHHHHHHh
Confidence 0111111111 1456777777778999999999999987654
No 48
>2iu8_A LPXD, UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; UDP-3- O-acyl-glucosamine N-acyltransferase, lipid A biosynthesis; HET: PLM UD1; 2.2A {Chlamydia trachomatis} PDB: 2iu9_A* 2iua_A*
Probab=99.67 E-value=1.3e-17 Score=160.67 Aligned_cols=103 Identities=10% Similarity=0.080 Sum_probs=59.1
Q ss_pred CeEEEEcCCeeccc--ChHHHHHHHHHcCCcEEEEEEEcCCCcCCcccEEEECC--CCCeEEEEEcCCcccccccccccc
Q 014953 130 EDVLILSGDHLYRM--DYMDFVQNHRQSGADITISCLPMDDSRASDFGLMKINN--EGRVLSFSEKPKGKDLKAMAVDTT 205 (415)
Q Consensus 130 ~~~lv~~gD~i~~~--~l~~~l~~h~~~~~~~ti~~~~~~~~~~~~~g~v~~d~--~~~v~~~~ek~~~~~~~~~~~~~~ 205 (415)
..=|+-.+|++++. +|.+++++|. +|+.. .+.+..+|+..+++ +++| .|.|||+....
T Consensus 11 ~~~~~~~~dhiy~m~~~l~~i~~~h~-----~tl~g----~~~~~~~Gv~~ld~a~~g~I-~F~ekPk~~~~-------- 72 (374)
T 2iu8_A 11 SSGLVPRGSHMSQSTYSLEQLADFLK-----VEFQG----NGATLLSGVEEIEEAKTAHI-TFLDNEKYAKH-------- 72 (374)
T ss_dssp ----------CCSCCEEHHHHHHHTT-----CEEES----CTTCEECEECCTTTCCTTEE-EECCSSSTHHH--------
T ss_pred ccCcccCccccccCcCcHHHHHHhhC-----CEEEC----CCcceEEEEeccccCCCCeE-EEEeCchhhhh--------
Confidence 34577789999987 8999999985 35553 22356788888874 4566 99999985321
Q ss_pred cccccccccccccceeeeeEEEEeHHHHHHHHhhhCCCCCcccccchhhhcccceEEEEEeCceEEe
Q 014953 206 VLGLSKQEAEEKPYIASMGVYLFKKEILLNLLRWRFPTANDFGSEIIPASANEQFLKAYLFNDYWED 272 (415)
Q Consensus 206 ~~~~~~~~~~~~~~l~~~Giyi~~~~~l~~~l~~~~~~~~~~~~~~l~~l~~~~~i~~~~~~g~~~d 272 (415)
..+.++|+|+|+++++..+. .| .+.+| ++...+.++|....+|++
T Consensus 73 ------------~~~~~aGiyI~~~~~l~~~~--------~~-~~~~p-l~~~~~~~a~~~~~~~~~ 117 (374)
T 2iu8_A 73 ------------LKSSEAGAIIISRTQFQKYR--------DL-NKNFL-ITSESPSLVFQKCLELFI 117 (374)
T ss_dssp ------------HHTCCCSEEEEEHHHHHTST--------TS-CSCEE-EESSCHHHHHHHHHTTTS
T ss_pred ------------hhcCCcEEEEeChhHhhhcc--------cc-ccceE-EEeCCHHHHHHHHHHHhc
Confidence 14678999999998774221 12 45566 555444444433334443
No 49
>2e8b_A Probable molybdopterin-guanine dinucleotide biosy protein A; putative protein, molybdenum cofactor, structural G NPPSFA; 1.61A {Aquifex aeolicus}
Probab=99.66 E-value=6.9e-17 Score=142.18 Aligned_cols=179 Identities=13% Similarity=0.112 Sum_probs=111.1
Q ss_pred ccceEEEEEcCCCCCcccccccCCcccceeeCCcceeehhehhhhhccCCcEEEEEcccChhHHHHHHHhhccCCCCccc
Q 014953 6 ARTVAAVILGGGAGTRLYPLTKQRAKPAVPIGGAYRLIDVPMSNCINSGINKVYILTQYNSASLNRHLARAYNYGSGVTF 85 (415)
Q Consensus 6 ~~~~~aVILAaG~g~Rl~plt~~~pK~llpv~g~~pli~~~l~~l~~~gi~~I~vv~~~~~~~i~~~l~~~~~~~~~~~~ 85 (415)
++++.|||||||.|+||+ .||+|+|++|+ |||+|+++.+..+ +++|+|++++... +++.
T Consensus 12 ~~~~~~iILA~G~g~Rmg-----~~K~ll~i~g~-pll~~~l~~l~~~-~~~i~vv~~~~~~---~~~~----------- 70 (201)
T 2e8b_A 12 SKVNTCYVLAGGKSKRFG-----EDKLLYEIKGK-KVIERVYETAKSV-FKEVYIVAKDREK---FSFL----------- 70 (201)
T ss_dssp CSCCEEEEEEESSCCCCS-----TTHHHHHHHHH-HHHHHHHHHHHTT-CSEEEEEESCSGG---GGGG-----------
T ss_pred ccCceEEEECCCCCccCC-----CCcccceECce-EHHHHHHHHHHHh-CCEEEEEeCcHHH---hhcC-----------
Confidence 345789999999999997 79999999999 9999999999988 8999999987754 1110
Q ss_pred CCceEEEecCccCCCCCCCccccchHHHHHHhhhhhcCCCCCCcCeEEEEcCCee-cccC-hHH-HHHHHHHcCCcEEEE
Q 014953 86 GDGCVEVLAATQTPGEAGKRWFQGTADAVRQFHWLFEDPRNKVIEDVLILSGDHL-YRMD-YMD-FVQNHRQSGADITIS 162 (415)
Q Consensus 86 ~~~~v~i~~~~~~~~~~~~~~~~Gt~~al~~~~~~i~~~~~~~~~~~lv~~gD~i-~~~~-l~~-~l~~h~~~~~~~ti~ 162 (415)
+ +.++..... ..|++++++.++..+. .+.+++++||+. .+.+ +.. ++ +.++++.
T Consensus 71 ~---~~~v~~~~~--------~~g~~~~i~~al~~~~------~~~~lv~~~D~P~i~~~~i~~~l~------~~~~~v~ 127 (201)
T 2e8b_A 71 N---APVVLDEFE--------ESASIIGLYTALKHAK------EENVFVLSGDLPLMKKETVLYVLE------NFKEPVS 127 (201)
T ss_dssp T---CCEEECCCS--------SCCHHHHHHHHHHHCS------SSEEEEEETTCTTCCHHHHHHHHH------TCCSSEE
T ss_pred C---ceEEecCCC--------CCCcHHHHHHHHHHcC------CCCEEEEeCCcCcCCHHHHHHHHh------cCCEEEE
Confidence 1 122221111 2599999999988774 478999999994 3443 455 44 1111110
Q ss_pred EEEcCCCcCCcccEEEECCCCCeEEEEEcCCcccccccccccccccccccccccccceeeeeEEEEeHHHHHHHHhhhCC
Q 014953 163 CLPMDDSRASDFGLMKINNEGRVLSFSEKPKGKDLKAMAVDTTVLGLSKQEAEEKPYIASMGVYLFKKEILLNLLRWRFP 242 (415)
Q Consensus 163 ~~~~~~~~~~~~g~v~~d~~~~v~~~~ek~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Giyi~~~~~l~~~l~~~~~ 242 (415)
.+ +|+ ....+|+| |+++++..+.+....
T Consensus 128 ----------------~~-~g~----------------------------------~~p~~giy-~~~~~~~~l~~~~~~ 155 (201)
T 2e8b_A 128 ----------------VA-KTE----------------------------------KLHTLVGV-YSKKLLEKIEERIKK 155 (201)
T ss_dssp ----------------EE-ESS----------------------------------SEEEEEEE-EEGGGHHHHHHHHHT
T ss_pred ----------------ec-CCc----------------------------------eeeEEEEE-eChhHHHHHHHHHHc
Confidence 00 110 12357999 999877544321111
Q ss_pred CCCcccccchhhhcccceEEEEEeC--ceEE--ecCCHHHHHHHHHh
Q 014953 243 TANDFGSEIIPASANEQFLKAYLFN--DYWE--DIGTIRSFFEANLA 285 (415)
Q Consensus 243 ~~~~~~~~~l~~l~~~~~i~~~~~~--g~~~--di~t~~~y~~an~~ 285 (415)
.. ..+..+++..++..+.++ +.|. |||||+||.+++..
T Consensus 156 g~-----~~~~~~l~~~~~~~~~~~~~~~~~~~dintpedl~~~~~~ 197 (201)
T 2e8b_A 156 GD-----YRIWALLKDVGYNEVEIPEELRYTLLNMNTKEDLKRILAI 197 (201)
T ss_dssp TC-----CCHHHHHHHHCCEEEECCGGGGGGGCCSCCC---------
T ss_pred CC-----chHHHHHHHCCeEEeccccccchhhcCCCCHHHHHHHHHH
Confidence 11 122333333456666664 5789 99999999988754
No 50
>1jv1_A Glcnac1P uridyltransferase isoform 1: AGX1; nucleotidyltransferase, alternative splicing; HET: UD1; 1.90A {Homo sapiens} SCOP: c.68.1.5 PDB: 1jv3_A* 1jvg_A* 1jvd_A* 1vm8_A*
Probab=99.65 E-value=7e-16 Score=152.34 Aligned_cols=212 Identities=16% Similarity=0.168 Sum_probs=139.6
Q ss_pred cceEEEEEcCCCCCcccccccCCcccceee---CCcceeehhehhhhhc--------cC----CcEEEEEcccChhHHHH
Q 014953 7 RTVAAVILGGGAGTRLYPLTKQRAKPAVPI---GGAYRLIDVPMSNCIN--------SG----INKVYILTQYNSASLNR 71 (415)
Q Consensus 7 ~~~~aVILAaG~g~Rl~plt~~~pK~llpv---~g~~pli~~~l~~l~~--------~g----i~~I~vv~~~~~~~i~~ 71 (415)
.+|.+||||||.||||+ .+.||+|+|| .|+ |+++++++++.+ .| +..+++...+..+.+.+
T Consensus 101 ~kvavViLAGG~GTRLg---~~~PK~l~pv~~~~gk-~~le~~~e~l~~lq~la~~~~G~~~~ip~vImtS~~t~e~t~~ 176 (505)
T 1jv1_A 101 NKVAVLLLAGGQGTRLG---VAYPKGMYDVGLPSRK-TLFQIQAERILKLQQVAEKYYGNKCIIPWYIMTSGRTMESTKE 176 (505)
T ss_dssp TCEEEEEECCCCCCTTS---CSSCGGGCCCCCTTCC-CHHHHHHHHHHHHHHHHHHHHSSCCCCCEEEEECTTTHHHHHH
T ss_pred CceEEEEEcCCccccCC---CCCCCccceeecCCCC-cHHHHHHHHHHHHHHHHHHhcCCCccceEEEEecCCCHHHHHH
Confidence 67999999999999996 6799999999 799 999999999876 36 77777777777899999
Q ss_pred HHHhhccCCCCcccCCceEEEecCcc-----C--CCC-----CCCccccchHHHHHHhhh--hhcCCCCCCcCeEEEEcC
Q 014953 72 HLARAYNYGSGVTFGDGCVEVLAATQ-----T--PGE-----AGKRWFQGTADAVRQFHW--LFEDPRNKVIEDVLILSG 137 (415)
Q Consensus 72 ~l~~~~~~~~~~~~~~~~v~i~~~~~-----~--~~~-----~~~~~~~Gt~~al~~~~~--~i~~~~~~~~~~~lv~~g 137 (415)
|+.+...|+-. ...+....... . ... .-...+.|+|+.+..+.. .++.....+.++|+|+++
T Consensus 177 ~f~~~~~fGl~----~~~I~~f~Q~~~P~i~~~g~~~l~~~~~~e~~P~GtGG~~~~L~~sg~L~~l~~~g~e~~~V~n~ 252 (505)
T 1jv1_A 177 FFTKHKYFGLK----KENVIFFQQGMLPAMSFDGKIILEEKNKVSMAPDGNGGLYRALAAQNIVEDMEQRGIWSIHVYCV 252 (505)
T ss_dssp HHHHTGGGGSC----GGGEEEEECCEEECEETTSCBCEEETTEECEEECCGGGHHHHHHHTTHHHHHHHTTCCEEEEEET
T ss_pred HHHhhhhcCCC----cCceEEEEecceEEEcCCCcccccCCcccccCCCCchHHHHHHHHcCcHHHHHhcCCCEEEEEEC
Confidence 99764222211 00122111000 0 000 001235799999876542 111000012489999999
Q ss_pred Cee-cccChHHHHHHHHHcCCcEEEEEEEcCCCcCCcccEEEECCCCCe--EEEEEcCCccccccccccccccccccccc
Q 014953 138 DHL-YRMDYMDFVQNHRQSGADITISCLPMDDSRASDFGLMKINNEGRV--LSFSEKPKGKDLKAMAVDTTVLGLSKQEA 214 (415)
Q Consensus 138 D~i-~~~~l~~~l~~h~~~~~~~ti~~~~~~~~~~~~~g~v~~d~~~~v--~~~~ek~~~~~~~~~~~~~~~~~~~~~~~ 214 (415)
|++ +..+...++.+|..+++++++.+.+.... .+.+|++..+ +|++ +.+.|+|..... .. ++ ..
T Consensus 253 Dn~L~~~~d~~~lg~~~~~~~~~~~~v~~k~~~-~e~~Gvl~~~-dg~~~vvEy~E~p~~~~~---~~-------~~-~g 319 (505)
T 1jv1_A 253 DNILVKVADPRFIGFCIQKGADCGAKVVEKTNP-TEPVGVVCRV-DGVYQVVEYSEISLATAQ---KR-------SS-DG 319 (505)
T ss_dssp TBTTCCTTCHHHHHHHHHTTCSEEEEEEECCST-TCSCCEEEEE-TTEEEEECGGGSCHHHHH---CB-------CT-TS
T ss_pred CccccccchHHHHHHHHHcCCCEEEEEEEccCC-ccCcceEEEE-CCeEEEEEEeeCCHHHhh---hc-------cc-cc
Confidence 995 77777889999999999999988873321 5789998875 4554 444444432110 00 00 01
Q ss_pred ccccceeeeeEEEEeHHHHHHHHhh
Q 014953 215 EEKPYIASMGVYLFKKEILLNLLRW 239 (415)
Q Consensus 215 ~~~~~l~~~Giyi~~~~~l~~~l~~ 239 (415)
....+..++|+|+|+.++++.+.+.
T Consensus 320 ~~~~~~~N~~~~~f~l~~L~~i~~~ 344 (505)
T 1jv1_A 320 RLLFNAGNIANHFFTVPFLRDVVNV 344 (505)
T ss_dssp SBSSCEEEEEEEEEEHHHHHHHHHT
T ss_pred ccccceeeEEEEEecHHHHHHHHHh
Confidence 1234789999999999999877653
No 51
>2oeg_A UTP-glucose-1-phosphate uridylyltransferase 2, putative; rossmann-fold, beta-helix, pyrophosphorylase; HET: UPG; 2.30A {Leishmania major} PDB: 2oef_A*
Probab=99.64 E-value=4.2e-15 Score=145.94 Aligned_cols=346 Identities=14% Similarity=0.113 Sum_probs=195.7
Q ss_pred cceEEEEEcCCCCCcccccccCCcccceeeC-CcceeehhehhhhhccC------CcEEEEEcccChhHHHHHHH-hhcc
Q 014953 7 RTVAAVILGGGAGTRLYPLTKQRAKPAVPIG-GAYRLIDVPMSNCINSG------INKVYILTQYNSASLNRHLA-RAYN 78 (415)
Q Consensus 7 ~~~~aVILAaG~g~Rl~plt~~~pK~llpv~-g~~pli~~~l~~l~~~g------i~~I~vv~~~~~~~i~~~l~-~~~~ 78 (415)
.++.+||||||.||||+ .+.||+|+||+ |+ |+++++++++.+.| +.-+++...+..+.+.+|+. +...
T Consensus 74 ~k~avViLAGGlGTRLg---~~~PK~llpV~~gk-~fLe~~ie~l~~~~~~~g~~ip~viMtS~~t~e~t~~~f~~~~~~ 149 (505)
T 2oeg_A 74 QSTVVLKLNGGLGTGMG---LCDAKTLLEVKDGK-TFLDFTALQVQYLRQHCSEHLRFMLMDSFNTSASTKSFLKARYPW 149 (505)
T ss_dssp HTEEEEEEECCCCGGGT---CCSCGGGSEEETTE-EHHHHHHHHHHHHHHHTCTTCEEEEEECHHHHHHHHHHHHHHCHH
T ss_pred hcceEEEEcCCcccccC---CCCCCcccccCCCC-cHHHHHHHHHHHHHHhcCCCcCEEEEeCCCCHHHHHHHHhhhhhc
Confidence 37899999999999999 77999999999 99 99999999999875 33344445555788999997 4221
Q ss_pred CCC---Ccc-cCCceEEEecCcc-C-----CCCCCCccccchHHHHHHh-----hhh-hcCCCCCCcCeEEEEcCCeecc
Q 014953 79 YGS---GVT-FGDGCVEVLAATQ-T-----PGEAGKRWFQGTADAVRQF-----HWL-FEDPRNKVIEDVLILSGDHLYR 142 (415)
Q Consensus 79 ~~~---~~~-~~~~~v~i~~~~~-~-----~~~~~~~~~~Gt~~al~~~-----~~~-i~~~~~~~~~~~lv~~gD~i~~ 142 (415)
++- ... |....+..+.... . ..+.-...+.|+|+++... ++. ++. +.++++|.++|+++.
T Consensus 150 fGl~~~~I~~f~Q~~~P~~~~~~~~~i~~~~~~~~e~~P~G~Gg~~~aL~~sGlL~~l~~~----G~e~i~V~N~DNL~~ 225 (505)
T 2oeg_A 150 LYQVFDSEVELMQNQVPKILQDTLEPAAWAENPAYEWAPPGHGDIYTALYGSGKLQELVEQ----GYRYMFVSNGDNLGA 225 (505)
T ss_dssp HHTTCCCCCEEECCCEECEETTTCCBCCCTTCGGGGEECCCTTHHHHHHHHTTHHHHHHHT----TCCEEEEECTTCTTC
T ss_pred cCCCccceEEEEEcCEEeEecCCCceeecCCCCccccCcCCchHHHHHHHhcChHHHHHhc----CCCEEEEEECCcccc
Confidence 221 001 1111111111100 0 0000012356999998754 222 321 257999999999874
Q ss_pred -cChHHHHHHHHHcCCcEEEEEEEcCCCcCCcccEEEEC------CCCC-------e--EEEEEcCCccccccccccccc
Q 014953 143 -MDYMDFVQNHRQSGADITISCLPMDDSRASDFGLMKIN------NEGR-------V--LSFSEKPKGKDLKAMAVDTTV 206 (415)
Q Consensus 143 -~~l~~~l~~h~~~~~~~ti~~~~~~~~~~~~~g~v~~d------~~~~-------v--~~~~ek~~~~~~~~~~~~~~~ 206 (415)
.|+ .++.+|.++++++++.+.+...+ ...+|++..+ .+|+ + +++.+-|+.....
T Consensus 226 ~~D~-~llg~~~~~~ad~~~~v~~k~~~-d~~~Gvl~~~~~~~~~~dg~~nvEyn~~~llEyse~p~e~~~~-------- 295 (505)
T 2oeg_A 226 TIDK-RVLAYMEKEKIDFLMEVCRRTES-DKKGGHLARQTVYVKGKDGQPDAEKRVLLLRESAQCPKADMES-------- 295 (505)
T ss_dssp CCCH-HHHHHHHHHTCSEEEEEEECCTT-CCSSEEEEEEEEEECCSSSCCCEEEEEEEEEEGGGSCGGGHHH--------
T ss_pred ccCH-HHHHHHHhcCCcEEEEEEEecCC-ccceeEEEEecccccccCCccccccCceeEEEeccCChhhhhc--------
Confidence 467 89999999999999999887762 2568888773 4577 3 3333333321100
Q ss_pred ccccccccccccceeeeeEEEEeHHHHHHHHhhh-----CCC-----C--------------CcccccchhhhcccceEE
Q 014953 207 LGLSKQEAEEKPYIASMGVYLFKKEILLNLLRWR-----FPT-----A--------------NDFGSEIIPASANEQFLK 262 (415)
Q Consensus 207 ~~~~~~~~~~~~~l~~~Giyi~~~~~l~~~l~~~-----~~~-----~--------------~~~~~~~l~~l~~~~~i~ 262 (415)
........+.++...+|+-+++..+++.. .+. . +.++.|+++.. + +..
T Consensus 296 -----~~g~~~f~~~Ninn~~~~l~~l~~~~~~~~~~~~Lp~~vn~K~i~~~d~~~~~~~qlE~~~~d~~~~~-~--~~~ 367 (505)
T 2oeg_A 296 -----FQDINKYSFFNTNNLWIRLPVLLETMQEHGGTLPLPVIRNEKTVDSSNSASPKVYQLETAMGAAIAMF-E--SAS 367 (505)
T ss_dssp -----HHCTTTTCEEEEEEEEEEHHHHHHHHHHTTSSCCCCCEEEEEESSSSCTTSCEEEEEECCGGGGGGSC-T--TCE
T ss_pred -----ccCccccCeeEEEEEEEEHHHHHHHHhhhcCccCCcceecccccCCCCCCCCCeEEEeEHHHHHHHhc-C--cce
Confidence 01112235578999999999998887651 110 0 01112222211 1 234
Q ss_pred EEEeCc-eEEecCCHHHHHHHHHhhcCCCCCCCccCCCCCccccCccCCCeee-c--CCccc--cceECCC-CEEcceEE
Q 014953 263 AYLFND-YWEDIGTIRSFFEANLALTAHPPMFSFYDATKPIYTSRRNLPPSKI-D--DSKIV--DSIISHG-SFITSSFI 335 (415)
Q Consensus 263 ~~~~~g-~~~di~t~~~y~~an~~~l~~~~~~~~~~~~~~~~~~~~i~~~~~i-~--~~~i~--~~~ig~~-~~I~~~~i 335 (415)
++.++- .|..+.+..++..+..++......-.+...... ....|.+.+ + ...+. ...+..| ..|.+ .
T Consensus 368 ~~~V~R~~FsPvKn~~dl~~~~sdly~~~~~~~~~~~~~~----~~~~p~i~l~p~~~~~~~~~~~r~~~g~psi~~--~ 441 (505)
T 2oeg_A 368 AIVVPRSRFAPVKTCADLLALRSDAYVVTDDFRLVLDDRC----HGHPPVVDLDSAHYKMMNGFEKLVQHGVPSLVE--C 441 (505)
T ss_dssp EEECCGGGCCCCSSHHHHHHHHSTTEEECTTCCEEECGGG----TTCCCEEEECHHHHSSHHHHHHHSTTCCCBCTT--E
T ss_pred EEEeccceeecccCCCCHHHHHHHHHhhcCCceEEEcccc----cCcCCeEEEChhHcCcHHHHHHhcCCCCCcccc--C
Confidence 444432 478888999999888877654321112111000 011222222 1 11221 1223332 12321 1
Q ss_pred eeeEEccCcEECCCcEEeecEEeCCccccchhHHHhhhhCCCcceEeCCCCEEeeeEECCCe
Q 014953 336 EHSVVGIRSRINANVHLKDTMMLGADFYETDAEVASLLAEGRVPVGIGENTKIKYEQLKPIC 397 (415)
Q Consensus 336 ~~svig~~~~ig~~~~i~~sii~~~~~~~~~~~~~~~~~~~~~~~~Ig~~~~i~~~~i~~~~ 397 (415)
..=+|--.++.|.++.+.++++..... -++ +..|-+|++++|..+...-
T Consensus 442 ~~L~v~G~~~f~~~v~l~G~v~i~a~~----------~~~---~~~ip~g~~l~n~~~~~~~ 490 (505)
T 2oeg_A 442 KRVTVKGLVQFGAGNVLTGTVTIENTD----------SAS---AFVIPDGAKLNDTTASPQQ 490 (505)
T ss_dssp EEEEEESSEECCTTCEEEEEEEEECCS----------CSS---CEECCTTCEEESCEECC--
T ss_pred cEEEEEcceEEccCcEEEEEEEEEecC----------CCC---cEEeCCCCEEeCceechhh
Confidence 122444456678888888876655410 011 2678888888887776543
No 52
>3d5n_A Q97W15_sulso; NESG, SSR125, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.80A {Sulfolobus solfataricus}
Probab=99.63 E-value=3.1e-16 Score=137.54 Aligned_cols=115 Identities=17% Similarity=0.251 Sum_probs=84.6
Q ss_pred ceEEEEEcCCCCCcccccccCCcccceeeCCcceeehhehhhhhccCCcEEEEEcccChhHHHHHHHhhccCCCCcccCC
Q 014953 8 TVAAVILGGGAGTRLYPLTKQRAKPAVPIGGAYRLIDVPMSNCINSGINKVYILTQYNSASLNRHLARAYNYGSGVTFGD 87 (415)
Q Consensus 8 ~~~aVILAaG~g~Rl~plt~~~pK~llpv~g~~pli~~~l~~l~~~gi~~I~vv~~~~~~~i~~~l~~~~~~~~~~~~~~ 87 (415)
+|.|||||||.|+||+ .||+|+|++|+ |||+|+++.+... +++|++++..+.+.+++. .+
T Consensus 2 ~~~~iIlAgG~g~Rmg-----~~K~l~~i~g~-pll~~~l~~l~~~---~ivvv~~~~~~~~~~~~~----------~~- 61 (197)
T 3d5n_A 2 NIGVIILAAGEGKRFG-----GDKLLAKIDNT-PIIMRTIRIYGDL---EKIIIVGKYVNEMLPLLM----------DQ- 61 (197)
T ss_dssp CEEEEEECSCCTTCCC-----SSGGGSBSSSS-BHHHHHHHHTTTS---BCCEEECTTHHHHGGGCT----------TS-
T ss_pred ceEEEEECCcCcccCC-----CCeeeCEeCce-EHHHHHHHHHHhC---CEEEEECCCHHHHHHHhc----------CC-
Confidence 4789999999999997 49999999999 9999999999877 888999887544433221 11
Q ss_pred ceEEEecCccCCCCCCCccccchHHHHHHhhhhhcCCCCCCcCeEEEEcCCe-ecccC-hHHHHHHHHHcCCcE
Q 014953 88 GCVEVLAATQTPGEAGKRWFQGTADAVRQFHWLFEDPRNKVIEDVLILSGDH-LYRMD-YMDFVQNHRQSGADI 159 (415)
Q Consensus 88 ~~v~i~~~~~~~~~~~~~~~~Gt~~al~~~~~~i~~~~~~~~~~~lv~~gD~-i~~~~-l~~~l~~h~~~~~~~ 159 (415)
+ ++.... +..|++++++.++..+.+ .+.+++++||. +.+.+ +..+++.+ +.++++
T Consensus 62 --~-~v~~~~--------~~~G~~~si~~al~~~~~-----~~~vlv~~~D~P~i~~~~i~~l~~~~-~~~~~~ 118 (197)
T 3d5n_A 62 --I-VIYNPF--------WNEGISTSLKLGLRFFKD-----YDAVLVALGDMPFVTKEDVNKIINTF-KPNCKA 118 (197)
T ss_dssp --C-EEECTT--------GGGCHHHHHHHHHHHTTT-----SSEEEEEETTCCCSCHHHHHHHHHTC-CTTCSE
T ss_pred --E-EEECCC--------CCCCHHHHHHHHHHhhcc-----CCcEEEEeCCccccCHHHHHHHHHHh-cCCCcE
Confidence 2 221111 125999999999988753 37899999999 55544 77887766 444443
No 53
>1e5k_A Molybdopterin-guanine dinucleotide biosynthesis protein A; molybdopterin nucleotidyl-transferase,; HET: CIT; 1.35A {Escherichia coli} SCOP: c.68.1.8 PDB: 1h4e_A* 1hjl_A* 1hjj_A* 1h4c_A* 1h4d_A* 1fr9_A 1frw_A*
Probab=99.63 E-value=1.7e-15 Score=133.26 Aligned_cols=111 Identities=15% Similarity=0.164 Sum_probs=83.8
Q ss_pred ccceEEEEEcCCCCCcccccccCCcccceeeCCcceeehhehhhhhccCCcEEEEEcccChhHHHHHHHhhccCCCCccc
Q 014953 6 ARTVAAVILGGGAGTRLYPLTKQRAKPAVPIGGAYRLIDVPMSNCINSGINKVYILTQYNSASLNRHLARAYNYGSGVTF 85 (415)
Q Consensus 6 ~~~~~aVILAaG~g~Rl~plt~~~pK~llpv~g~~pli~~~l~~l~~~gi~~I~vv~~~~~~~i~~~l~~~~~~~~~~~~ 85 (415)
|+++.|||||||.|+||+ ..||+|+|++|+ |||+|+++.+.. ++++|+|++++..+.+. . +
T Consensus 4 mm~~~~iILAgG~s~Rmg----~~~K~ll~i~G~-pli~~~l~~l~~-~~~~ivvv~~~~~~~~~----~---------~ 64 (201)
T 1e5k_A 4 MTTITGVVLAGGKARRMG----GVDKGLLELNGK-PLWQHVADALMT-QLSHVVVNANRHQEIYQ----A---------S 64 (201)
T ss_dssp CCSEEEEEECCCCCSSSC----SSCGGGSEETTE-EHHHHHHHHHHH-HCSCEEEECSSSHHHHH----T---------T
T ss_pred CCcceEEEEcCCCCCcCC----CCCCceeeECce-eHHHHHHHHHHh-hCCEEEEEcCCcHHHHh----h---------c
Confidence 467999999999999996 379999999999 999999999984 68999999988754321 1 1
Q ss_pred CCceEEEecCccCCCCCCCccccchHHHHHHhhhhhcCCCCCCcCeEEEEcCCe-ecccC-hHHHHHH
Q 014953 86 GDGCVEVLAATQTPGEAGKRWFQGTADAVRQFHWLFEDPRNKVIEDVLILSGDH-LYRMD-YMDFVQN 151 (415)
Q Consensus 86 ~~~~v~i~~~~~~~~~~~~~~~~Gt~~al~~~~~~i~~~~~~~~~~~lv~~gD~-i~~~~-l~~~l~~ 151 (415)
+ +.++..... ...|++++++.++..+. .+.+++++||+ +...+ +..+++.
T Consensus 65 ~---~~~v~~~~~-------~~~G~~~si~~~l~~~~------~~~vlv~~~D~P~i~~~~i~~l~~~ 116 (201)
T 1e5k_A 65 G---LKVIEDSLA-------DYPGPLAGMLSVMQQEA------GEWFLFCPCDTPYIPPDLAARLNHQ 116 (201)
T ss_dssp S---CCEECCCTT-------CCCSHHHHHHHHHHHCC------SSEEEEEETTCTTCCTTHHHHHHHT
T ss_pred C---CeEEecCCC-------CCCCHHHHHHHHHHhCC------CCcEEEEeCCcCcCCHHHHHHHHhh
Confidence 1 122221111 01489999999988774 47899999999 55555 6777765
No 54
>3r8y_A 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N- acetyltransferase; structural genomics, csgid; 1.70A {Bacillus anthracis} PDB: 3cj8_A*
Probab=99.55 E-value=2e-15 Score=136.62 Aligned_cols=137 Identities=15% Similarity=0.216 Sum_probs=86.2
Q ss_pred cccceEEEEEeCce----EEecCCHHHHHHHHHhhcCCC-----------CCCCccCCCCCccccCccCCCeee------
Q 014953 256 ANEQFLKAYLFNDY----WEDIGTIRSFFEANLALTAHP-----------PMFSFYDATKPIYTSRRNLPPSKI------ 314 (415)
Q Consensus 256 ~~~~~i~~~~~~g~----~~di~t~~~y~~an~~~l~~~-----------~~~~~~~~~~~~~~~~~i~~~~~i------ 314 (415)
.+..++++|...+| |.|+++ |+.+|+.++... +...+..+.+.+.+++.+.+++.|
T Consensus 36 ~~~~~~~~~~~~~~~~g~w~di~~---~l~~n~~~l~~~~~~~~~~~~~~~~~~~~~~~~~I~~~a~I~~~v~Ig~~~~I 112 (240)
T 3r8y_A 36 PETVQAFVNKKSGVLFGEWSEIKT---ILDENSKYIVDYVVENDRRNSAIPMLDLKGIKARIEPGAIIRDHVEIGDNAVI 112 (240)
T ss_dssp CTTSEEEECSSEEEEEEEHHHHHH---HHHHTTTTEEEEEEEECCBSBCSCBCCCTTCSSEECTTCEEBSSCEECTTCEE
T ss_pred CCcceEEEcCCCeEEEccHHHHHH---HHHhccceechhhhhhhhhhhccchhhccCCCCEECCCCEECCCcEECCCCEE
Confidence 44567777776666 777776 888888776322 111112223333333333333333
Q ss_pred -cCCcc-ccceECCCCEEc-ceEEe-eeEEccCcEECCCcEEee---------cEEeCCccccchhHHHhhhhCCCcceE
Q 014953 315 -DDSKI-VDSIISHGSFIT-SSFIE-HSVVGIRSRINANVHLKD---------TMMLGADFYETDAEVASLLAEGRVPVG 381 (415)
Q Consensus 315 -~~~~i-~~~~ig~~~~I~-~~~i~-~svig~~~~ig~~~~i~~---------sii~~~~~~~~~~~~~~~~~~~~~~~~ 381 (415)
.++.| .++.||++|+|+ ++.|. +|+||++|+|++++.|.+ ++|+++ |.
T Consensus 113 ~~~s~I~~~~~IG~~~~I~~~~~I~~~~~IG~~~~I~~~~~i~~~~~~~~~~~~~Ig~~-------------------~~ 173 (240)
T 3r8y_A 113 MMNATINIGAVIGEGSMIDMNAVLGGRATVGKNCHVGAGAVLAGVIEPPSAKPVIVEDD-------------------VV 173 (240)
T ss_dssp CTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECCCCSCTTSCCCEECTT-------------------CE
T ss_pred CCCCEECCCCEECCCCEECCCCEECCCCEECCCcEECCCcEECCCccCCCCCCcEECCC-------------------CE
Confidence 33333 355566666665 45553 566666666666666655 555555 89
Q ss_pred eCCCCEEe-eeEECCCeEEcCCcccCcccccccc
Q 014953 382 IGENTKIK-YEQLKPICHIVETKYDSSTISRFSL 414 (415)
Q Consensus 382 Ig~~~~i~-~~~i~~~~~i~~~~~~~~~~~~~~~ 414 (415)
||.+|.|. +++||+++.|++++.+.+.+..++.
T Consensus 174 IG~~~~I~~~~~Ig~~~~I~~gsvV~~~vp~~~v 207 (240)
T 3r8y_A 174 IGANVVVLEGVTVGKGAVVAAGAVVTEDVPPYTV 207 (240)
T ss_dssp ECTTCEECTTCEECTTCEECTTCEECSCBCTTEE
T ss_pred ECCCCEECCCcEECCCCEECCCCEECCCcCCCcE
Confidence 99999994 9999999999999988887777654
No 55
>3ngw_A Molybdopterin-guanine dinucleotide biosynthesis P (MOBA); alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.31A {Archaeoglobus fulgidus}
Probab=99.54 E-value=7.2e-14 Score=123.18 Aligned_cols=115 Identities=17% Similarity=0.255 Sum_probs=83.4
Q ss_pred eEEEEEcCCCCCcccccccCCcccceeeCCcceeehhehhhhhccCCcEEEEEcccChhHHHHHHHhhccCCCCcccCCc
Q 014953 9 VAAVILGGGAGTRLYPLTKQRAKPAVPIGGAYRLIDVPMSNCINSGINKVYILTQYNSASLNRHLARAYNYGSGVTFGDG 88 (415)
Q Consensus 9 ~~aVILAaG~g~Rl~plt~~~pK~llpv~g~~pli~~~l~~l~~~gi~~I~vv~~~~~~~i~~~l~~~~~~~~~~~~~~~ 88 (415)
|.|||||||.|+||+ .||+|+|++|+ |||+|+++.+... +|+|++++ .+.+. .+.+.+ +
T Consensus 1 m~aiILAgG~s~Rmg-----~~K~ll~~~G~-pli~~~~~~l~~~---~vvvv~~~-~~~~~-~~~~~~--------~-- 59 (208)
T 3ngw_A 1 MKVAVLVGGVGRRIG-----MEKTEVMLCGK-KLIEWVLEKYSPF---QTVFVCRD-EKQAE-KLSSRY--------E-- 59 (208)
T ss_dssp CEEEEECCCCCTTTT-----SCGGGCEETTE-EHHHHHHHHHTTS---EEEEECSS-HHHHH-HHHTTS--------C--
T ss_pred CEEEEECCCchhhCC-----CCCcccEECCe-eHHHHHHHHhcCC---CEEEEECC-HHHHH-HHHHhc--------C--
Confidence 689999999999996 79999999999 9999999999876 89999874 23332 332211 1
Q ss_pred eEEEecCccCCCCCCCccccchHHHHHHhhhhhcCCCCCCcCeEEEEcCCe-ecccC-hHHHHHHHHHcCCcEEE
Q 014953 89 CVEVLAATQTPGEAGKRWFQGTADAVRQFHWLFEDPRNKVIEDVLILSGDH-LYRMD-YMDFVQNHRQSGADITI 161 (415)
Q Consensus 89 ~v~i~~~~~~~~~~~~~~~~Gt~~al~~~~~~i~~~~~~~~~~~lv~~gD~-i~~~~-l~~~l~~h~~~~~~~ti 161 (415)
+.++..... -.|...+++.++..+ . +.+ +++||+ +.+.+ +..+++.+.+.++++++
T Consensus 60 -~~~v~d~~~--------~~G~~~si~~gl~~~-~------~~v-v~~~D~P~i~~~~i~~l~~~~~~~~~~~v~ 117 (208)
T 3ngw_A 60 -AEFIWDLHK--------GVGSIAGIHAALRHF-G------SCV-VAAIDMPFVKPEVLEHLYKEGEKAGCDALI 117 (208)
T ss_dssp -SCEECCTTC--------CCSHHHHHHHHHHHH-S------SEE-EEETTCTTCCHHHHHHHHHHHHHHTCSEEE
T ss_pred -CeEEecCCC--------CCChHHHHHHHHHHc-C------CCE-EEECCccCCCHHHHHHHHHHhhcCCCCEEE
Confidence 122322111 148889999998877 3 678 999999 55555 78888877665665544
No 56
>1w55_A ISPD/ISPF bifunctional enzyme; biosynthetic pathway, isoprenoids, nonmevalonate, transferase; HET: C GPP; 2.3A {Campylobacter jejuni} SCOP: c.68.1.13 d.79.5.1 PDB: 1w57_A*
Probab=99.54 E-value=7.6e-15 Score=140.11 Aligned_cols=196 Identities=14% Similarity=0.129 Sum_probs=124.9
Q ss_pred cceEEEEEcCCCCCcccccccCCcccceeeCCcceeehhehhhhhc-cCCcEEEEEcccChhHHHHHHHhhccCCCCccc
Q 014953 7 RTVAAVILGGGAGTRLYPLTKQRAKPAVPIGGAYRLIDVPMSNCIN-SGINKVYILTQYNSASLNRHLARAYNYGSGVTF 85 (415)
Q Consensus 7 ~~~~aVILAaG~g~Rl~plt~~~pK~llpv~g~~pli~~~l~~l~~-~gi~~I~vv~~~~~~~i~~~l~~~~~~~~~~~~ 85 (415)
+++.|||||||.|+||. ...||+|+|++|+ |||+|+++.+.+ .++++|+|+++ ..+.+.+++ . +
T Consensus 2 mki~aIILAaG~ssRmg---~~~pK~ll~l~Gk-PLi~~~l~~l~~~~~~~~IvVvt~-~~~~i~~~~------~-~--- 66 (371)
T 1w55_A 2 SEMSLIMLAAGNSTRFN---TKVKKQFLRLGND-PLWLYATKNLSSFYPFKKIVVTSS-NITYMKKFT------K-N--- 66 (371)
T ss_dssp CCEEEEEECCSCCTTTC---SSSCGGGCEEBTE-EHHHHHHHHHHTTSCCSCEEEEES-CHHHHHTTC------S-S---
T ss_pred CccEEEEECCCCCccCC---CCCCcceEEECCe-EHHHHHHHHHHccCCCCeEEEEcC-CHHHHHHHh------C-C---
Confidence 56899999999999997 4579999999999 999999999998 68999999998 433333221 1 0
Q ss_pred CCceEEEecCccCCCCCCCccccchHHHHHHhhhhhcCCCCCCcCeEEEEcCCe-eccc-ChHHHHHHHHHcCCcEEEEE
Q 014953 86 GDGCVEVLAATQTPGEAGKRWFQGTADAVRQFHWLFEDPRNKVIEDVLILSGDH-LYRM-DYMDFVQNHRQSGADITISC 163 (415)
Q Consensus 86 ~~~~v~i~~~~~~~~~~~~~~~~Gt~~al~~~~~~i~~~~~~~~~~~lv~~gD~-i~~~-~l~~~l~~h~~~~~~~ti~~ 163 (415)
+.++. .. .|+.++++.++..+. .+.+++++||. +.+. .+..+++.+.+.+ .++.+
T Consensus 67 ----v~~v~--~g---------~g~~~sv~~aL~~l~------~d~vlv~~~D~Pli~~~~i~~li~~~~~~~--a~i~~ 123 (371)
T 1w55_A 67 ----YEFIE--GG---------DTRAESLKKALELID------SEFVMVSDVARVLVSKNLFDRLIENLDKAD--CITPA 123 (371)
T ss_dssp ----SEEEE--CC---------SSHHHHHHHHHTTCC------SSEEEEEETTCTTCCHHHHHHHHTTGGGCS--EEEEE
T ss_pred ----CEEEe--CC---------CChHHHHHHHHHhcC------CCeEEEEeCCcccCCHHHHHHHHHHHHhcC--CEEEE
Confidence 22321 11 378899999887764 47899999999 4444 4788888776553 34444
Q ss_pred EEcCCCcCCcccEEEECCCCCeEEEEEcCCcccccccccccccccccccccccccceeee-eEEEEeHHHHHHHHhhhCC
Q 014953 164 LPMDDSRASDFGLMKINNEGRVLSFSEKPKGKDLKAMAVDTTVLGLSKQEAEEKPYIASM-GVYLFKKEILLNLLRWRFP 242 (415)
Q Consensus 164 ~~~~~~~~~~~g~v~~d~~~~v~~~~ek~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-Giyi~~~~~l~~~l~~~~~ 242 (415)
.+..+. ..+ + .+.+... .+... .-+.|+.+.+..+++...
T Consensus 124 ~~~~d~--vk~----------v---~~t~~r~-----------------------~l~~~~~P~~f~~~~l~~~~~~~~- 164 (371)
T 1w55_A 124 LKVADT--TLF----------D---NEALQRE-----------------------KIKLIQTPQISKTKLLKKALDQNL- 164 (371)
T ss_dssp ECCCSC--EEE----------T---TEEECGG-----------------------GCCEECSCEEEEHHHHHHHTSSCC-
T ss_pred EEeecC--eee----------e---eeecCcc-----------------------ceeecCCcceecHHHHHHHHHhcc-
Confidence 443321 000 0 0001100 01111 124678777765543211
Q ss_pred CCCcccccchhhhc-ccceEEEEEeCceEEecCCHHHHHHHH
Q 014953 243 TANDFGSEIIPASA-NEQFLKAYLFNDYWEDIGTIRSFFEAN 283 (415)
Q Consensus 243 ~~~~~~~~~l~~l~-~~~~i~~~~~~g~~~di~t~~~y~~an 283 (415)
. ..+....+. .+.++..++.++.|.||+||+||..|+
T Consensus 165 ---~-~td~~~ll~~~g~~V~~v~~~~~~~dIdTpeDL~~Ae 202 (371)
T 1w55_A 165 ---E-FTDDSTAIAAMGGKIWFVEGEENARKLTFKEDLKKLD 202 (371)
T ss_dssp ---C-CSSHHHHHHTTTCCEEEEECCGGGCCCCSGGGGGGSC
T ss_pred ---c-ccCHHHHHHhCCCcEEEEECCccccCCCCHHHHHHHH
Confidence 0 111111111 245788888778899999999999886
No 57
>2yqc_A UDP-N-acetylglucosamine pyrophosphorylase; uridine-diphospho-N- acetylglucosamine, N-acetylglucosamine-1-phosphate, transferase; 1.90A {Candida albicans} PDB: 2yqh_A* 2yqj_A* 2yqs_A*
Probab=99.48 E-value=1.6e-13 Score=134.99 Aligned_cols=213 Identities=17% Similarity=0.195 Sum_probs=139.0
Q ss_pred cceEEEEEcCCCCCcccccccCCcccceeeC---Ccceeehhehhhhhcc--------C------CcEEEEEcccChhHH
Q 014953 7 RTVAAVILGGGAGTRLYPLTKQRAKPAVPIG---GAYRLIDVPMSNCINS--------G------INKVYILTQYNSASL 69 (415)
Q Consensus 7 ~~~~aVILAaG~g~Rl~plt~~~pK~llpv~---g~~pli~~~l~~l~~~--------g------i~~I~vv~~~~~~~i 69 (415)
.++.+|+||||.||||. .+.||+|+||+ |+ |+++++++++.+. | +..+++...+..+.+
T Consensus 102 gkvavvlLaGG~GTRLg---~~~PK~l~~v~l~~gk-~~l~~~~e~l~~~~~~~~~~~G~~~~~~ip~~ImtS~~t~~~t 177 (486)
T 2yqc_A 102 GEVAVLLMAGGQGTRLG---SSAPKGCFNIELPSQK-SLFQIQAEKILKIEQLAQQYLKSTKKPIINWYIMTSGPTRNAT 177 (486)
T ss_dssp TCEEEEEEEESBCGGGT---CSSBGGGCBCCCTTCC-BHHHHHHHHHHHHHHHHHHHHTCSSCCCCEEEEEECGGGHHHH
T ss_pred CCeEEEEEcCCccccCC---CCCCCccceecCCCCC-cHHHHHHHHHHHHHHHhhhhcCCCcCCccCEEEEECCCCHHHH
Confidence 47999999999999995 78999999999 99 9999999999986 6 888888888989999
Q ss_pred HHHHHhhccCCCCcccCCceEEEecCccCCC--CCC-----------CccccchHHHHHHhhh--hhcCCCCCCcCeEEE
Q 014953 70 NRHLARAYNYGSGVTFGDGCVEVLAATQTPG--EAG-----------KRWFQGTADAVRQFHW--LFEDPRNKVIEDVLI 134 (415)
Q Consensus 70 ~~~l~~~~~~~~~~~~~~~~v~i~~~~~~~~--~~~-----------~~~~~Gt~~al~~~~~--~i~~~~~~~~~~~lv 134 (415)
.+|+.+...|+-.. ..+.+.....-+. ..| ...+.|+|+.+..... .+++....+.+.+.+
T Consensus 178 ~~~~~~~~~fgl~~----~~v~~f~Q~~~P~i~~dg~~i~l~~~~~i~~~P~G~Ggi~~aL~~sG~Ld~l~~~G~~yi~v 253 (486)
T 2yqc_A 178 ESFFIENNYFGLNS----HQVIFFNQGTLPCFNLQGNKILLELKNSICQSPDGNGGLYKALKDNGILDDLNSKGIKHIHM 253 (486)
T ss_dssp HHHHHHTGGGGSCG----GGEEEEECCEEECBCTTSSSBCEEETTEECEEECCGGGHHHHHHHTTHHHHHHHHTCCEEEE
T ss_pred HHHHhhccccCCCc----ceEEEEecccceeEcCCCCccccCCCCccccCcCCchHHHHHHHHcCcHHHHHhcCCeEEEE
Confidence 99997643232111 1122111000000 001 1135799988765431 111111122578889
Q ss_pred EcCCeecc--cChHHHHHHHHHcCCcEEEEEEEcCCCcCCcccEEEECC-CC--CeEEEEEcCCcccccccccccccccc
Q 014953 135 LSGDHLYR--MDYMDFVQNHRQSGADITISCLPMDDSRASDFGLMKINN-EG--RVLSFSEKPKGKDLKAMAVDTTVLGL 209 (415)
Q Consensus 135 ~~gD~i~~--~~l~~~l~~h~~~~~~~ti~~~~~~~~~~~~~g~v~~d~-~~--~v~~~~ek~~~~~~~~~~~~~~~~~~ 209 (415)
.+.|.+.. .| ..++.+|..+++++++.+.+...+ ....|++.... +| +|+.+.|+|...... .
T Consensus 254 ~~vDN~l~~~~D-p~~lg~~~~~~~~~~~~vv~k~~~-~e~~Gvl~~~~~dg~~~vvEy~E~~~~~~~~---~------- 321 (486)
T 2yqc_A 254 YCVDNCLVKVAD-PIFIGFAIAKKFDLATKVVRKRDA-NESVGLIVLDQDNQKPCVIEYSEISQELANK---K------- 321 (486)
T ss_dssp EETTBTTCCTTC-HHHHHHHHHHTCSEEEEEEECCST-TCCCCEEEEETTTTEEEEECGGGSCHHHHHC---E-------
T ss_pred ECCCCceeeccC-HHHHHHHHHcCCCEEEEEEEcCCC-CCceeEEEEEecCCCEEEEEEecCCHHHhhc---c-------
Confidence 99998544 34 468899999999999988876442 36678877532 45 477777776532100 0
Q ss_pred ccc-ccccccceeeeeEEEEeHHHHHHHHhh
Q 014953 210 SKQ-EAEEKPYIASMGVYLFKKEILLNLLRW 239 (415)
Q Consensus 210 ~~~-~~~~~~~l~~~Giyi~~~~~l~~~l~~ 239 (415)
+++ ......+..++++|+|+.+++...++.
T Consensus 322 ~~~~~~~~~~~~~Ni~~~~~~l~~L~~~l~~ 352 (486)
T 2yqc_A 322 DPQDSSKLFLRAANIVNHYYSVEFLNKMIPK 352 (486)
T ss_dssp ETTEEEEESSCEEEEEEEEEEHHHHHHHHHH
T ss_pred cccccccccccceeEEEEEEeHHHHHHHHHh
Confidence 000 011134678999999999999875544
No 58
>3c8v_A Putative acetyltransferase; YP_390128.1, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; 2.28A {Desulfovibrio desulfuricans subsp}
Probab=99.46 E-value=3e-14 Score=140.11 Aligned_cols=238 Identities=11% Similarity=0.017 Sum_probs=129.7
Q ss_pred ccchHHHHHHhhhhhcCCCCCCcCeEEEEc----CCeecccChHHHHHHHHHc--C---------CcEEEEEEEcCCCcC
Q 014953 107 FQGTADAVRQFHWLFEDPRNKVIEDVLILS----GDHLYRMDYMDFVQNHRQS--G---------ADITISCLPMDDSRA 171 (415)
Q Consensus 107 ~~Gt~~al~~~~~~i~~~~~~~~~~~lv~~----gD~i~~~~l~~~l~~h~~~--~---------~~~ti~~~~~~~~~~ 171 (415)
+++++++++.+...+ .+++|+. +|.....+|.+++..|+++ + +..|+.+....+.-.
T Consensus 123 pL~~a~~i~~~d~~~--------~~t~V~~~~~kpd~~~~~~l~~l~~~h~~~~~g~~~~~~~ig~~~ti~L~~l~d~li 194 (496)
T 3c8v_A 123 PLHDDEVITIKDSFL--------NKTLVHSNSHDPESPEEFTIRNTVAMPYANIHGSLTEGSFIGSFATVDLSTIHNSVV 194 (496)
T ss_dssp ECSSCCEEEEESCEE--------ESCEEESCCCCTTCTTEEEEESCEECTTCEEESCCEESCEECTTCEEESCEEESCEE
T ss_pred chhHhhhHHhhhhcC--------CceEEeccccCCCCccccchHHHHHHHHHhhcCCcccceEecccceeeHHHHHHHHH
Confidence 367777754442211 1237777 5877777776777777753 2 233444444444212
Q ss_pred CcccEEEECCCCCeEEEEEcCCcccccccccccccccccccccccccceeeeeEEEEeHHHHHHHHhhhCCCCCcccccc
Q 014953 172 SDFGLMKINNEGRVLSFSEKPKGKDLKAMAVDTTVLGLSKQEAEEKPYIASMGVYLFKKEILLNLLRWRFPTANDFGSEI 251 (415)
Q Consensus 172 ~~~g~v~~d~~~~v~~~~ek~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Giyi~~~~~l~~~l~~~~~~~~~~~~~~ 251 (415)
..++.+. .+++....++|...- ..++.....+|.|+++++...+...
T Consensus 195 ~~~~~~~---~g~i~~~~~~pg~~~-------------------i~~~~~lnf~Y~f~~~~L~~~l~~~----------- 241 (496)
T 3c8v_A 195 RYFSYVQ---TGELVGKCVEPGQIW-------------------IKSGDELEFHYSFDKAILDKYISQE----------- 241 (496)
T ss_dssp CTTCEEE---SSEEESCEECTTEEE-------------------EECTTSEEEEEECCHHHHTTTCBCC-----------
T ss_pred HHHhhhc---CCceEEeeecCCcee-------------------cccccccceEEEcCHHHHHHHHhhc-----------
Confidence 4555552 366766666665211 0122344569999998876432111
Q ss_pred hhhhcccceEEEEEeCceEEec--CCHHHHHHHHHhhcC----CCCCCCccCCCCCccccCccCCCeee-cCCccccceE
Q 014953 252 IPASANEQFLKAYLFNDYWEDI--GTIRSFFEANLALTA----HPPMFSFYDATKPIYTSRRNLPPSKI-DDSKIVDSII 324 (415)
Q Consensus 252 l~~l~~~~~i~~~~~~g~~~di--~t~~~y~~an~~~l~----~~~~~~~~~~~~~~~~~~~i~~~~~i-~~~~i~~~~i 324 (415)
.+.. ..+.|.|+ ..++++.++...... ....-.++++.+.+...+.|++++.| +++.|.++.|
T Consensus 242 -----~~~n-----~~g~~~Dll~~~~~d~~~i~~~~~~~~~~~I~~~a~I~p~a~i~g~v~IG~~~~I~~~a~I~~v~I 311 (496)
T 3c8v_A 242 -----AGSC-----PTGVLMEFVEVRQEDFEEVFASGHMASGAGSASGASVSGYAVIKGDTVIGENVLVSQRAYLDNAWM 311 (496)
T ss_dssp -----TTSC-----CBSHHHHHHHTTTHHHHHHHHC--------CCTTCEECTTSEEESSCEECTTCEECTTCEEEEEEE
T ss_pred -----cCcc-----ccceeeehhccchHHHHHHhhccccccCcccCCCcEECCCcEEeCCeEECCCCEECCCcEEeceEe
Confidence 0000 12223333 234555444221111 00111244444444455566666666 5666667777
Q ss_pred CCCCEEc-ceEEeeeEEccCcEECCCcEEeecEEeCCccccchhHHHhhhhCCCcceEeCCCCEEe-e----eEECCCeE
Q 014953 325 SHGSFIT-SSFIEHSVVGIRSRINANVHLKDTMMLGADFYETDAEVASLLAEGRVPVGIGENTKIK-Y----EQLKPICH 398 (415)
Q Consensus 325 g~~~~I~-~~~i~~svig~~~~ig~~~~i~~sii~~~~~~~~~~~~~~~~~~~~~~~~Ig~~~~i~-~----~~i~~~~~ 398 (415)
|++|.|+ ++.|.+|+||++|.||+++.|.+++|+++ |.||.+|.|. + ++||+++.
T Consensus 312 G~~~~I~~~~~I~~~vIG~~~~Ig~~a~I~gv~IGd~-------------------v~IG~~a~I~~~~~~~v~IG~~a~ 372 (496)
T 3c8v_A 312 GKGSNAQENCYIINSRLERNCVTAHGGKIINAHLGDM-------------------IFTGFNSFLQGSESSPLKIGDGCV 372 (496)
T ss_dssp CTTCEECTTCEEEEEEEEESCEECTTCEEESEEEEET-------------------CEECTTCEEECCSSSCEEECTTCE
T ss_pred cCCCEECCCceEeceEeCCCCEECCCcEEcCceECCC-------------------cEECCCCEEeCCCCcceEECCCCE
Confidence 7777777 57777777777777777777777777777 6666666666 4 46666666
Q ss_pred EcCCcccC----cccccccc
Q 014953 399 IVETKYDS----STISRFSL 414 (415)
Q Consensus 399 i~~~~~~~----~~~~~~~~ 414 (415)
|++++.+. ..|-++|+
T Consensus 373 IGagsvV~~~~~~~I~~~s~ 392 (496)
T 3c8v_A 373 VMPHTIIDLEEPLEIPAGHL 392 (496)
T ss_dssp ECTTCEEECSSCEEECSSEE
T ss_pred ECCCCEEecCCCcEeCCCCE
Confidence 66666555 45554443
No 59
>3oc9_A UDP-N-acetylglucosamine pyrophosphorylase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.80A {Entamoeba histolytica}
Probab=99.46 E-value=6.6e-13 Score=126.37 Aligned_cols=210 Identities=11% Similarity=0.088 Sum_probs=140.8
Q ss_pred cceEEEEEcCCCCCcccccccCCcccceee---CCcceeehhehhhhhc-------------cCCcEEEEEcccChhHHH
Q 014953 7 RTVAAVILGGGAGTRLYPLTKQRAKPAVPI---GGAYRLIDVPMSNCIN-------------SGINKVYILTQYNSASLN 70 (415)
Q Consensus 7 ~~~~aVILAaG~g~Rl~plt~~~pK~llpv---~g~~pli~~~l~~l~~-------------~gi~~I~vv~~~~~~~i~ 70 (415)
.++.+|+||||.||||+ .+.||+|+|| .|+ |+++++++++.+ .++.-+++...+.++.+.
T Consensus 34 gkvavvlLAGG~GTRLG---~~~PK~~~~Vgl~~gk-s~lq~~~e~i~~lq~l~~~~~~~~~~~Ip~~IMtS~~t~e~t~ 109 (405)
T 3oc9_A 34 GKTALITPAGGQGSRLG---FEHPKGMFVLPFEIPK-SIFQMTSERLLRLQELASEYSHQKNVMIHWFLMTNEETIEEIN 109 (405)
T ss_dssp TCEEEEEECCSBCTTTT---CCSBGGGCEECSSSCE-EHHHHHHHHHHHHHHHHHHHHCCSCCCCEEEEEECTTTHHHHH
T ss_pred CceEEEEecCCCccccc---CCCCCccccccCCCCC-cHHHHHHHHHHHHHHHHhhhccccCCCCCEEEEeCCccHHHHH
Confidence 57899999999999996 6899999999 899 999999988863 578777777888889999
Q ss_pred HHHHhhccCCCCcccCCceEEEec-----CccCC-------CCCCCccccchHHHHHHhhh--hhcCCCCCCcCeEEEEc
Q 014953 71 RHLARAYNYGSGVTFGDGCVEVLA-----ATQTP-------GEAGKRWFQGTADAVRQFHW--LFEDPRNKVIEDVLILS 136 (415)
Q Consensus 71 ~~l~~~~~~~~~~~~~~~~v~i~~-----~~~~~-------~~~~~~~~~Gt~~al~~~~~--~i~~~~~~~~~~~lv~~ 136 (415)
+|+.+...|+-.. ..+.... ..... ...-...+.|+|+....... .+++....+.+.+++.+
T Consensus 110 ~~f~~~~~fGl~~----~~i~~f~Q~~~P~i~~dg~i~l~~~~~i~~~P~GhGgi~~aL~~sG~Ld~l~~~Gieyi~v~n 185 (405)
T 3oc9_A 110 NYFKEHQYFGLSS----EQIHCFPQGMLPVVDFNGKILYEKKDKPYMAPNGHGGLFKALKDNGILEFMNEKGIKYSVAHN 185 (405)
T ss_dssp HHHHHTGGGGSCT----TSEEEEECCEEECBCTTSCBCEEETTEECEEECCGGGHHHHHHHTTHHHHHHHHTCCEEEEEC
T ss_pred HHHHhCcccCCCc----cceEEEeeCceeEEecCCCeecCCCCccccccCCChHHHHHHHHCCcHHHHHhcCCEEEEEEe
Confidence 9998643232110 1121111 00000 00001234688887765431 12111111247899999
Q ss_pred CCe-ecccChHHHHHHHHHcCCcEEEEEEEcCCCcCCcccEEEE-CCCCCeEEEEEcCCccccccccccccccccccccc
Q 014953 137 GDH-LYRMDYMDFVQNHRQSGADITISCLPMDDSRASDFGLMKI-NNEGRVLSFSEKPKGKDLKAMAVDTTVLGLSKQEA 214 (415)
Q Consensus 137 gD~-i~~~~l~~~l~~h~~~~~~~ti~~~~~~~~~~~~~g~v~~-d~~~~v~~~~ek~~~~~~~~~~~~~~~~~~~~~~~ 214 (415)
.|. +.......++.+|.++++++++-+.+...+ .+..|++.. |...+|+.+.|.|.. .... ....
T Consensus 186 vDN~L~~~~Dp~~lg~~~~~~~d~~~kvv~k~~~-dek~Gvl~~~dg~~~vvEysei~~e-~e~~-----------~~~g 252 (405)
T 3oc9_A 186 VDNILCKDVDPNMIGYMDLLQSEICIKIVKKGFK-EEKVGVLVKEQERIKVVEYTELTDE-LNKQ-----------LSNG 252 (405)
T ss_dssp TTBTTCCSSCHHHHHHHHHTTCSEEEEEEECCST-TCSCCEEEEETTEEEEECGGGCCTT-TTCB-----------CTTS
T ss_pred CCCcccccCCHHHHHHHHHcCCCEEEEEEECCCC-CCccceEEEECCeeEEEEEeeCCHH-Hhhc-----------CCCC
Confidence 999 888888899999999999999999887652 267888875 433467777776664 2100 0011
Q ss_pred ccccceeeeeEEEEeHHHHHHHH
Q 014953 215 EEKPYIASMGVYLFKKEILLNLL 237 (415)
Q Consensus 215 ~~~~~l~~~Giyi~~~~~l~~~l 237 (415)
....+..++++++|+.++|+++.
T Consensus 253 ~l~fn~~Ni~~h~fs~~fL~~i~ 275 (405)
T 3oc9_A 253 EFIYNCGHISINGYSTSFLEKAA 275 (405)
T ss_dssp CBSSCEEEEEEEEEEHHHHHHHT
T ss_pred ceeeccceeEeeecCHHHHHHhh
Confidence 12346778999999999998776
No 60
>3bfp_A Acetyltransferase; LEFT-handed beta helix, COA binding protein, N-glycan biosynthesis, bacillosamine, structural genomics, MKBSGI; HET: FLC; 1.75A {Campylobacter jejuni} SCOP: b.81.1.8 PDB: 2vhe_A* 3bsw_A* 3bss_A* 3bsy_A* 2npo_A
Probab=99.28 E-value=2.7e-11 Score=105.55 Aligned_cols=127 Identities=14% Similarity=0.063 Sum_probs=95.3
Q ss_pred eEEecCCHHHHHHHHHhhcCCC-CCCCccCCCCCccccCccC--CCeee-cCCccc-cceECCCCEEc-ceEEe-eeEEc
Q 014953 269 YWEDIGTIRSFFEANLALTAHP-PMFSFYDATKPIYTSRRNL--PPSKI-DDSKIV-DSIISHGSFIT-SSFIE-HSVVG 341 (415)
Q Consensus 269 ~~~di~t~~~y~~an~~~l~~~-~~~~~~~~~~~~~~~~~i~--~~~~i-~~~~i~-~~~ig~~~~I~-~~~i~-~svig 341 (415)
+..-++++....+..+.+.+.. ....+++|.+.+.+++.++ +++.+ +++.|. ++.||++|+|+ ++.|. ++.||
T Consensus 50 ~~iaig~~~~r~~~~~~l~~~~~~~~~~i~~~a~i~~~~~Ig~~~g~~I~~~~~I~~~~~IG~~~~I~~~~~i~~~~~Ig 129 (194)
T 3bfp_A 50 FFIAIGNNEIRKKIYQKISENGFKIVNLIHKSALISPSAIVEENAGILIMPYVVINAKAKIEKGVILNTSSVIEHECVIG 129 (194)
T ss_dssp EEECCCCHHHHHHHHHHHHTTTCCBCCEECTTCEECTTCEECTTSCCEECTTCEECTTCEECTTCEECTTCEECTTCEEC
T ss_pred EEEEeCCHHHHHHHHHHHHHcCCccccccCCeEEECCCceeCCCCCcEEcCCCEECCCCEECCCCEECCCCEEcCCCEEC
Confidence 4567888877666666555432 2234667777777777888 88888 667664 68888888887 67775 78888
Q ss_pred cCcEECCCcEEee-cEEeCCccccchhHHHhhhhCCCcceEeCCCCEEe-eeEECCCeEEcCCcccCcccccccc
Q 014953 342 IRSRINANVHLKD-TMMLGADFYETDAEVASLLAEGRVPVGIGENTKIK-YEQLKPICHIVETKYDSSTISRFSL 414 (415)
Q Consensus 342 ~~~~ig~~~~i~~-sii~~~~~~~~~~~~~~~~~~~~~~~~Ig~~~~i~-~~~i~~~~~i~~~~~~~~~~~~~~~ 414 (415)
++|+|++++.|.+ +.|+++ |.||.++.|. ++.|++++.|++++.+.+.+..++.
T Consensus 130 ~~~~I~~~~~i~~~~~Ig~~-------------------~~Ig~~~~i~~~~~Ig~~~~Igagsvv~~~v~~~~~ 185 (194)
T 3bfp_A 130 EFSHVSVGAKCAGNVKIGKN-------------------CFLGINSCVLPNLSLADDSILGGGATLVKNQDEKGV 185 (194)
T ss_dssp TTCEECTTCEECTTCEECTT-------------------CEECTTCEECTTCEECTTCEECTTCEECSCBCSCCE
T ss_pred CCCEECCCCEECCCcEECCC-------------------CEEcCCCEECCCCEECCCCEECCCCEEccccCCCCE
Confidence 8888888888877 777777 8888888887 8889999999999887777766553
No 61
>3mqg_A Lipopolysaccharides biosynthesis acetyltransferas; beta helix, acetyl transferase, transferase; HET: ACO U5P UDP PE4; 1.43A {Bordetella petrii} PDB: 3mqh_A*
Probab=99.24 E-value=1e-11 Score=108.11 Aligned_cols=117 Identities=17% Similarity=0.240 Sum_probs=82.0
Q ss_pred ccCCCCCccccCccCCCeee-cCCccc-cceECCCCEEc-ceEEe-eeEEccCcEECCCcEEee-cEEeCCccccchhHH
Q 014953 295 FYDATKPIYTSRRNLPPSKI-DDSKIV-DSIISHGSFIT-SSFIE-HSVVGIRSRINANVHLKD-TMMLGADFYETDAEV 369 (415)
Q Consensus 295 ~~~~~~~~~~~~~i~~~~~i-~~~~i~-~~~ig~~~~I~-~~~i~-~svig~~~~ig~~~~i~~-sii~~~~~~~~~~~~ 369 (415)
+++|.+.+.+.+.+++++.| +++.|. ++.||++|.|+ ++.|. ++.||++|.|++++.|.+ +.|++++.++.++.+
T Consensus 5 ~I~p~a~I~~~~~Ig~~~~I~~~~~I~~~~~IG~~~~Ig~~~~I~~~~~IG~~~~I~~~~~I~~~~~Ig~~~~ig~~~~~ 84 (192)
T 3mqg_A 5 TIHPTAIVDEGARIGAHSRIWHWVHICGGAEIGEGCSLGQNVFVGNRVRIGNRVKIQNNVSVYDNVFLEDDVFCGPSMVF 84 (192)
T ss_dssp EECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECSSCEECSSCEECTTCEECTTEEECTTCEECTTCBC
T ss_pred EECCCcEECCCCEECCCCEECCCCEECCCcEECCCCEECCCEEECCceEECCCcEEcCCcEEeCCCEECCCCEECCceEE
Confidence 45566666666666666666 555553 67778888887 56664 477777777777777743 566666666555433
Q ss_pred H-----------------hhhhCCCcceEeCCCCEEe-eeEECCCeEEcCCcccCcccccccc
Q 014953 370 A-----------------SLLAEGRVPVGIGENTKIK-YEQLKPICHIVETKYDSSTISRFSL 414 (415)
Q Consensus 370 ~-----------------~~~~~~~~~~~Ig~~~~i~-~~~i~~~~~i~~~~~~~~~~~~~~~ 414 (415)
. +.++++ |.||.+|.|. ++.||+++.|++++.+.+.+.++++
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~Ig~~---v~IG~~~~I~~g~~Ig~~~~IgagsvV~~~vp~~~v 144 (192)
T 3mqg_A 85 TNVYNPRAAIERKSEYRDTIVRQG---ATLGANCTVVCGATIGRYAFVGAGAVVNKDVPDFAL 144 (192)
T ss_dssp CSCSSCBTTBCCGGGCCCEEECTT---CEECTTCEECTTCEECTTCEECTTCEECSCBCTTEE
T ss_pred ecccCCccccccccccCCcEECCC---cEECCCCEECCCCEECCCCEEcCCCEECcccCCCCE
Confidence 2 355666 7888888887 8999999999999998888877764
No 62
>2pig_A Putative transferase; SCR6, NESG, YDCK, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.38A {Salmonella paratyphi} PDB: 2f9c_A
Probab=99.23 E-value=5e-12 Score=118.62 Aligned_cols=138 Identities=12% Similarity=0.124 Sum_probs=83.9
Q ss_pred EEecCCHHHHHHHHHhhcCCC--CCCCccC-CCCCccc-cCccCCCeee-cCCccc-cceECCCCEEc-ceEEeeeEEcc
Q 014953 270 WEDIGTIRSFFEANLALTAHP--PMFSFYD-ATKPIYT-SRRNLPPSKI-DDSKIV-DSIISHGSFIT-SSFIEHSVVGI 342 (415)
Q Consensus 270 ~~di~t~~~y~~an~~~l~~~--~~~~~~~-~~~~~~~-~~~i~~~~~i-~~~~i~-~~~ig~~~~I~-~~~i~~svig~ 342 (415)
..+|..+.+|-...+..+.+| ++..+.. .+..+.. .+.+.+++++ +++.|. ++.||++|+|+ ++.|.+|+|++
T Consensus 26 l~ri~al~~f~~v~~g~lgg~i~~e~nl~~~~~~~I~~~~a~I~~~a~I~~~~~I~g~~~Ig~~~~Ig~~~~I~~~~Ig~ 105 (334)
T 2pig_A 26 LRQVIAVTDFNDVKAGTSGGWVDADNVLSQQGDCWIYDENAMAFAGTEITGNARITQPCTLYNNVRIGDNVWIDRADISD 105 (334)
T ss_dssp EEEEEESSCBTTBCTTCEEEEESSTTSBCSSSSCEECCTTCEEETTCEECTTCEEESSCEEESSCEECTTCEEESCEEES
T ss_pred EEEEEEeeccccccCCccCCeEeccCCcccCCceEEcCCCeEEcCCcEECCCcEEeeeeeECCCcEECCCCEEEeEEEcC
Confidence 456666666666666666554 1111211 2223334 4555566666 566664 68888888888 68888999999
Q ss_pred CcEECCCcEEeecEEeCCccccchhHHH------------------hhhhCCCc--------ceEeCCCCEEeeeEECCC
Q 014953 343 RSRINANVHLKDTMMLGADFYETDAEVA------------------SLLAEGRV--------PVGIGENTKIKYEQLKPI 396 (415)
Q Consensus 343 ~~~ig~~~~i~~sii~~~~~~~~~~~~~------------------~~~~~~~~--------~~~Ig~~~~i~~~~i~~~ 396 (415)
+|.|+++++|.+|++++++.+..++++. +.++++.. .|.|+.||.|.+++|+++
T Consensus 106 ~~~I~~~s~I~~s~I~~~~~I~~~~~i~~~s~I~~~~~~~~~~~~g~~I~~~a~I~~s~I~~g~~I~~~a~I~~svI~~~ 185 (334)
T 2pig_A 106 GARISDNVTIQSSSVREECAIYGDARVLNQSEILAIQGLTHEHAQILQIYDRATVNHSRIVHQVQLYGNATITHAFIEHR 185 (334)
T ss_dssp SCEECTTCEEESCEEESSEEECTTCEEESSCEEEC--------CCCEEECTTCEEESCEEETTCEECTTCEEESEEECTT
T ss_pred CCEEeCCcEEeccEEcCCeEEecCCEEeCCEEEeecceeecccCCCeEECCCCEEeccEEcCCCEEcCCeEEeCcEEcCC
Confidence 9999999999998887777765555332 11111110 155555555656666666
Q ss_pred eEEcCCcccCc
Q 014953 397 CHIVETKYDSS 407 (415)
Q Consensus 397 ~~i~~~~~~~~ 407 (415)
+.|++++.+..
T Consensus 186 a~I~~~a~V~~ 196 (334)
T 2pig_A 186 AEVFDFALIEG 196 (334)
T ss_dssp CEECTTCEEEC
T ss_pred CEECCCcEECC
Confidence 66666665543
No 63
>1xhd_A Putative acetyltransferase/acyltransferase; structural genomics, protein structure initiative, medwest C structural genomics, MCSG; 1.90A {Bacillus cereus} SCOP: b.81.1.5 PDB: 3vnp_A 2eg0_A
Probab=99.22 E-value=2.7e-11 Score=103.53 Aligned_cols=73 Identities=14% Similarity=0.066 Sum_probs=42.7
Q ss_pred ceECCCCEEc-ceEEe-----eeEEccCcEECCCcEEeecEEeCCccccchhHHHhhhhCCCcceEeCCCCEEe-eeEEC
Q 014953 322 SIISHGSFIT-SSFIE-----HSVVGIRSRINANVHLKDTMMLGADFYETDAEVASLLAEGRVPVGIGENTKIK-YEQLK 394 (415)
Q Consensus 322 ~~ig~~~~I~-~~~i~-----~svig~~~~ig~~~~i~~sii~~~~~~~~~~~~~~~~~~~~~~~~Ig~~~~i~-~~~i~ 394 (415)
+.||++|.|+ ++.|. +++||++|.|++++.|.+++|+++ |.||.+|.|. ++.||
T Consensus 52 v~IG~~~~I~~~~~I~~~~~~~~~Ig~~~~Ig~~~~i~~~~Ig~~-------------------~~Ig~~~~i~~~~~Ig 112 (173)
T 1xhd_A 52 TIIGDRVNVQDQCTLHQSPQYPLILEDDVTVGHQVILHSCHIKKD-------------------ALIGMGSIILDGAEIG 112 (173)
T ss_dssp EEECTTCEECTTCEEECCTTCCEEECTTCEECTTCEEESCEECTT-------------------CEECTTCEECTTCEEC
T ss_pred EEECCCCEECCCCEEEeCCCCCeEECCCCEECCCCEEeCCEECCC-------------------CEEcCCCEEcCCCEEC
Confidence 4455555555 34444 455555555555555555555555 6777777766 67777
Q ss_pred CCeEEcCCcccC--ccccccc
Q 014953 395 PICHIVETKYDS--STISRFS 413 (415)
Q Consensus 395 ~~~~i~~~~~~~--~~~~~~~ 413 (415)
+++.|++++.+. +.|.+++
T Consensus 113 ~~~~Ig~~s~V~~~~~i~~~~ 133 (173)
T 1xhd_A 113 EGAFIGAGSLVSQGKKIPPNT 133 (173)
T ss_dssp TTCEECTTCEECTTCEECTTE
T ss_pred CCCEECCCCEECCCcEeCCCC
Confidence 777777777665 4455444
No 64
>4ea9_A Perosamine N-acetyltransferase; beta helix, acetyl coenzyme A, GDP-perosa transferase; HET: JBT; 0.90A {Caulobacter vibrioides} PDB: 4ea8_A* 4ea7_A* 4eaa_A* 4eab_A*
Probab=99.21 E-value=5.4e-11 Score=105.87 Aligned_cols=125 Identities=12% Similarity=0.056 Sum_probs=92.8
Q ss_pred EecCCHHHHHHHHHhhcCCC-CCCCccCCCCCccccCccCCCeee-cCCccc-cceECCCCEEc-ceEEe-eeEEccCcE
Q 014953 271 EDIGTIRSFFEANLALTAHP-PMFSFYDATKPIYTSRRNLPPSKI-DDSKIV-DSIISHGSFIT-SSFIE-HSVVGIRSR 345 (415)
Q Consensus 271 ~di~t~~~y~~an~~~l~~~-~~~~~~~~~~~~~~~~~i~~~~~i-~~~~i~-~~~ig~~~~I~-~~~i~-~svig~~~~ 345 (415)
.-+++++...+..+.+.+.. ....++++.+.+...+.+++++.| +++.|. ++.||++|.|+ ++.|. +|+||++|+
T Consensus 76 iAIg~~~~R~~i~~~l~~~g~~~~~~i~~~a~i~~~v~IG~g~~I~~~~~i~~~~~IG~~~~I~~~~~I~~~~~Ig~~~~ 155 (220)
T 4ea9_A 76 VAIGDNRLRQKLGRKARDHGFSLVNAIHPSAVVSPSVRLGEGVAVMAGVAINADSWIGDLAIINTGAVVDHDCRLGAACH 155 (220)
T ss_dssp ECCCCHHHHHHHHHHHHHTTCEECCEECTTCEECTTCEECSSCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCE
T ss_pred EecCCHHHHHHHHHHHHhcCCCcCCcCCCCCEECCCCEECCCCEEcCCCEECCCCEECCCCEECCCCEECCCCEECCCCE
Confidence 34667665555555554332 223456777777777777777777 666664 78888888888 67775 688888888
Q ss_pred ECCCcEEee-cEEeCCccccchhHHHhhhhCCCcceEeCCCCEEe-eeEECCCeEEcCCcccCcccccccc
Q 014953 346 INANVHLKD-TMMLGADFYETDAEVASLLAEGRVPVGIGENTKIK-YEQLKPICHIVETKYDSSTISRFSL 414 (415)
Q Consensus 346 ig~~~~i~~-sii~~~~~~~~~~~~~~~~~~~~~~~~Ig~~~~i~-~~~i~~~~~i~~~~~~~~~~~~~~~ 414 (415)
|++++.|.+ +.|+++ |.||.++.|. ++.||+++.|++++.+.+.+..++.
T Consensus 156 i~~~~~i~~~v~Ig~~-------------------~~Ig~~~~i~~~~~Ig~~~~igagsvv~~~v~~~~~ 207 (220)
T 4ea9_A 156 LGPASALAGGVSVGER-------------------AFLGVGARVIPGVTIGADTIVGAGGVVVRDLPDSVL 207 (220)
T ss_dssp ECTTCEECSSCEECTT-------------------CEECTTCEECTTCEECTTCEECTTCEECSCBCTTCE
T ss_pred ECCCCEEcCCCEECCC-------------------CEECCCCEEcCCcEECCCCEECCCCEEccccCCCcE
Confidence 888888887 677777 8999999997 8999999999999988887776654
No 65
>3ixc_A Hexapeptide transferase family protein; niaid, ssgcid, seattle structural genomics center for infect disease, GRAM-negative bacteria; 1.61A {Anaplasma phagocytophilum}
Probab=99.19 E-value=3.6e-11 Score=104.51 Aligned_cols=91 Identities=13% Similarity=0.096 Sum_probs=51.7
Q ss_pred cceECCCCEEc-ceEEe----eeEEccCcEECCCcEEe------ecEEeCCccccchhHHH-hhhhCCCcceEeCCCCEE
Q 014953 321 DSIISHGSFIT-SSFIE----HSVVGIRSRINANVHLK------DTMMLGADFYETDAEVA-SLLAEGRVPVGIGENTKI 388 (415)
Q Consensus 321 ~~~ig~~~~I~-~~~i~----~svig~~~~ig~~~~i~------~sii~~~~~~~~~~~~~-~~~~~~~~~~~Ig~~~~i 388 (415)
++.||++|.|+ ++.|. +.+||++|.|++++.|. +++|++++.|+.++.+. +.++++ |.||.+|.|
T Consensus 51 ~v~IG~~~~I~~~~~I~~~~~~i~IG~~~~I~~~~~I~~~~~~g~~~Ig~~~~Ig~~~~i~~~~Ig~~---~~Ig~~~~I 127 (191)
T 3ixc_A 51 DVCIGKNASIWYGTVLRGDVDKIEVGEGTNIQDNTVVHTDSMHGDTVIGKFVTIGHSCILHACTLGNN---AFVGMGSIV 127 (191)
T ss_dssp EEEECTTCEECTTCEEEEEEEEEEECTTCEECTTCEECC----CCEEECTTCEECTTCEECSCEECTT---CEECTTCEE
T ss_pred CcEECCCCEECCCCEEecCCCCeEECCCCEECCCCEEeecCCcCCeEECCCCEECCCCEEECCEECCC---CEECCCCEE
Confidence 34444444444 34442 22555555555555554 55555555555554443 234444 777777777
Q ss_pred e-eeEECCCeEEcCCcccC--cccccccc
Q 014953 389 K-YEQLKPICHIVETKYDS--STISRFSL 414 (415)
Q Consensus 389 ~-~~~i~~~~~i~~~~~~~--~~~~~~~~ 414 (415)
. ++.|++++.|++++.+. +.|.+++.
T Consensus 128 ~~~~~Ig~~~~Ig~gsvV~~~~~i~~~~~ 156 (191)
T 3ixc_A 128 MDRAVMEEGSMLAAGSLLTRGKIVKSGEL 156 (191)
T ss_dssp CTTCEECTTCEECTTCEECTTCEECTTEE
T ss_pred eCCeEECCCCEECCCCEECCCcCcCCCeE
Confidence 6 67777777777777766 56655543
No 66
>3r3r_A Ferripyochelin binding protein; structural genomics, csgid, center for structural genomics O infectious diseases, all beta protein; 1.20A {Salmonella enterica subsp} SCOP: b.81.1.0 PDB: 3tio_A 3tis_A
Probab=99.19 E-value=4.8e-11 Score=103.34 Aligned_cols=73 Identities=14% Similarity=0.092 Sum_probs=47.6
Q ss_pred eECCCCEEc-ceEE------------eeeEEccCcEECCCcEEeecEEeCCccccchhHHHhhhhCCCcceEeCCCCEEe
Q 014953 323 IISHGSFIT-SSFI------------EHSVVGIRSRINANVHLKDTMMLGADFYETDAEVASLLAEGRVPVGIGENTKIK 389 (415)
Q Consensus 323 ~ig~~~~I~-~~~i------------~~svig~~~~ig~~~~i~~sii~~~~~~~~~~~~~~~~~~~~~~~~Ig~~~~i~ 389 (415)
.||++|.|+ ++.| .+++||++|.||+++.|.+++|+++ |.||.+|.|.
T Consensus 56 ~IG~~~~I~~~~~I~~~~~~~~~~~~~~~~Ig~~~~Ig~~~~i~~~~Ig~~-------------------~~Ig~~~~I~ 116 (187)
T 3r3r_A 56 AIGARTNIQDGSVLHVTHKSSSNPHGNPLIIGEDVTVGHKVMLHGCTIGNR-------------------VLVGMGSIVL 116 (187)
T ss_dssp EECTTCEECTTCEEECBCCBTTBC-CBCEEECSSCEECTTCEEESCEECSS-------------------EEECTTCEEC
T ss_pred EECCCCEECCCCEEecCCccccCCCCCCeEECCCCEECCCCEEeCcEECCC-------------------CEECCCCEEC
Confidence 555555555 4555 4556666666666666666555555 7788888875
Q ss_pred -eeEECCCeEEcCCcccC--cccccccc
Q 014953 390 -YEQLKPICHIVETKYDS--STISRFSL 414 (415)
Q Consensus 390 -~~~i~~~~~i~~~~~~~--~~~~~~~~ 414 (415)
++.||+++.|++++.+. +.+-+++.
T Consensus 117 ~~~~Ig~~~~Ig~~s~V~~~~~i~~~~v 144 (187)
T 3r3r_A 117 DGAIIEDDVMIGAGSLVPQHKRLESGYL 144 (187)
T ss_dssp TTCEECSSEEECTTCEECTTCEECTTEE
T ss_pred CCCEECCCCEECCCCEECCCcCcCCCcE
Confidence 77888888888887766 56655543
No 67
>1v3w_A Ferripyochelin binding protein; beta-helix, carbonic anhydrase, structural genomics, riken S genomics/proteomics initiative, RSGI, lyase; 1.50A {Pyrococcus horikoshii} SCOP: b.81.1.5 PDB: 1v67_A 2fko_A
Probab=99.19 E-value=5.4e-11 Score=101.70 Aligned_cols=92 Identities=12% Similarity=0.016 Sum_probs=55.9
Q ss_pred cCCCCCccccCccCCCeee-cCCcccc----ceECCCCEEc-ceEEe-----eeEEccCcEECCCcEEeecEEeCCcccc
Q 014953 296 YDATKPIYTSRRNLPPSKI-DDSKIVD----SIISHGSFIT-SSFIE-----HSVVGIRSRINANVHLKDTMMLGADFYE 364 (415)
Q Consensus 296 ~~~~~~~~~~~~i~~~~~i-~~~~i~~----~~ig~~~~I~-~~~i~-----~svig~~~~ig~~~~i~~sii~~~~~~~ 364 (415)
+++.+.+...+.+++++.+ +++.+.. +.||++|.|+ ++.|. +++||++|.|++++.|.+++|+++
T Consensus 19 I~~~a~i~g~v~IG~~~~I~~~~~i~~~~~~~~IG~~~~I~~~~~I~~~~~~~~~Ig~~~~I~~~~~i~~~~Ig~~---- 94 (173)
T 1v3w_A 19 VDENAVVIGDVVLEEKTSVWPSAVLRGDIEQIYVGKYSNVQDNVSIHTSHGYPTEIGEYVTIGHNAMVHGAKVGNY---- 94 (173)
T ss_dssp ECTTSEEEEEEEECTTCEECTTCEEEEEEEEEEECTTCEECTTCEEECBTTBCEEECSSCEECTTCEEESCEECSS----
T ss_pred ECCCCEEeCCEEECCCCEECCCeEEecCCceEEECCCCEECCCcEEEecCCCCeEECCCCEECCCCEECCCEECCC----
Confidence 3444444444455555555 4555542 6777777777 56665 477788888877777777777777
Q ss_pred chhHHHhhhhCCCcceEeCCCCEEe-eeEECCCeEEcCCcccC
Q 014953 365 TDAEVASLLAEGRVPVGIGENTKIK-YEQLKPICHIVETKYDS 406 (415)
Q Consensus 365 ~~~~~~~~~~~~~~~~~Ig~~~~i~-~~~i~~~~~i~~~~~~~ 406 (415)
|.||.+|.|. ++.||+++.|++++.+.
T Consensus 95 ---------------~~Ig~~~~i~~~~~Ig~~~~Ig~~s~V~ 122 (173)
T 1v3w_A 95 ---------------VIIGISSVILDGAKIGDHVIIGAGAVVP 122 (173)
T ss_dssp ---------------EEECTTCEECTTCEECSSEEECTTCEEC
T ss_pred ---------------CEECCCCEEeCCCEECCCCEECCCCEEC
Confidence 5555555544 45555555555555443
No 68
>3eh0_A UDP-3-O-[3-hydroxymyristoyl] glucosamine N- acyltransferase; LPXD, LEFT-handed parallel beta helix, acyl carrier protein, antibiotic resistance; 2.60A {Escherichia coli}
Probab=99.18 E-value=7.8e-11 Score=111.80 Aligned_cols=97 Identities=13% Similarity=0.120 Sum_probs=49.4
Q ss_pred EecCCHHHHHHHHHhhcCC-CCCCCccCCCCCccccCccCCCeee-cCCccc-cceECCCCEEc-ceEE-eeeEEccCcE
Q 014953 271 EDIGTIRSFFEANLALTAH-PPMFSFYDATKPIYTSRRNLPPSKI-DDSKIV-DSIISHGSFIT-SSFI-EHSVVGIRSR 345 (415)
Q Consensus 271 ~di~t~~~y~~an~~~l~~-~~~~~~~~~~~~~~~~~~i~~~~~i-~~~~i~-~~~ig~~~~I~-~~~i-~~svig~~~~ 345 (415)
+-+.+|...+.-...++.. ......++|.+.+.+++.++++++| +++.|. ++.||++|+|+ ++.| .++.||++|.
T Consensus 74 ~~~~~p~~~~~~~~~~~~~~~~~~~~i~~~a~i~~~a~ig~~~~I~~~~~I~~~v~IG~~~~I~~~~~Ig~~~~IG~~~~ 153 (341)
T 3eh0_A 74 LVVKNPYLTYARMAQILDTTPQPAQNIAPSAVIDATAKLGNNVSIGANAVIESGVELGDNVIIGAGCFVGKNSKIGAGSR 153 (341)
T ss_dssp EECSCHHHHHHHHHHHHCCCCCSCCSBCTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCE
T ss_pred EEeCCHHHHHHHHHHHhcccCCccCccCCCcEECCCcEECCCCEECCCcEECCCcEECCCcEECCCcEECCCCEECCCcE
Confidence 4567787755544444443 2333456666666666666666655 444443 45555555554 3444 3444444444
Q ss_pred ECCCcEE-eecEEeCCccccchh
Q 014953 346 INANVHL-KDTMMLGADFYETDA 367 (415)
Q Consensus 346 ig~~~~i-~~sii~~~~~~~~~~ 367 (415)
|++++.| .++.|+++++|.+++
T Consensus 154 I~~~~~I~~~~~IG~~~~I~~g~ 176 (341)
T 3eh0_A 154 LWANVTIYHEIQIGQNCLIQSGT 176 (341)
T ss_dssp ECSSCEECTTCEECSSCEECTTC
T ss_pred ECCCcEECCCCEECCccEEcCCc
Confidence 4444444 334444444444443
No 69
>4e79_A UDP-3-O-acylglucosamine N-acyltransferase; lipopolysaccaride synthesis; 2.66A {Acinetobacter baumannii} PDB: 4e75_A
Probab=99.17 E-value=9.1e-11 Score=111.88 Aligned_cols=101 Identities=11% Similarity=0.035 Sum_probs=54.3
Q ss_pred eEEecCCHHHHHHHHHhhcCCCCCCCccCCCCCccccCccCCCeee-cCCccc-cceECCCCEEc-ceEEe-eeEEccCc
Q 014953 269 YWEDIGTIRSFFEANLALTAHPPMFSFYDATKPIYTSRRNLPPSKI-DDSKIV-DSIISHGSFIT-SSFIE-HSVVGIRS 344 (415)
Q Consensus 269 ~~~di~t~~~y~~an~~~l~~~~~~~~~~~~~~~~~~~~i~~~~~i-~~~~i~-~~~ig~~~~I~-~~~i~-~svig~~~ 344 (415)
.|.-+.+|...+.-...++...+....++|.+.+.+++.+++++.| +++.|. ++.||++|+|+ ++.|. ++.||++|
T Consensus 78 ~~i~~~~p~~~~~~~~~~~~~~~~~~~i~p~a~I~~~a~ig~~~~I~~~~~I~~~~~IG~~~~I~~~~~I~~~~~IG~~~ 157 (357)
T 4e79_A 78 NFIIVDNPYLAFAILTHVFDKKISSTGIESTARIHPSAVISETAYIGHYVVIGENCVVGDNTVIQSHTKLDDNVEVGKDC 157 (357)
T ss_dssp EEEECSCHHHHHHHHHTTSSCCCCCCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECSSC
T ss_pred cEEEECCHHHHHHHHHHHhccccccCeeCCCCEECCCCEECCCCEECCCCEECCCCEECCCCEECCCCEECCCCEECCCC
Confidence 3566788887655544454433222556666666666666666655 444443 45555555555 34443 45555555
Q ss_pred EECCCcEE-eecEEeCCccccchhHH
Q 014953 345 RINANVHL-KDTMMLGADFYETDAEV 369 (415)
Q Consensus 345 ~ig~~~~i-~~sii~~~~~~~~~~~~ 369 (415)
.|++++.| .+++|+++++|.+++.+
T Consensus 158 ~I~~~~~I~~~~~IG~~~~I~~g~~I 183 (357)
T 4e79_A 158 FIDSYVTITGSSKLRDRVRIHSSTVI 183 (357)
T ss_dssp EECTTCEECTTCEECSSCEECTTCEE
T ss_pred EECCCcEEecccEEEeEeeccCCeEE
Confidence 55555555 33445555555444443
No 70
>3kwd_A Carbon dioxide concentrating mechanism protein; LEFT-handed beta helix, gamma carbonic anhydrase, disulfide dependent activity; 1.10A {Thermosynechococcus elongatus} PDB: 3kwe_A 3kwc_A
Probab=99.15 E-value=1.3e-10 Score=102.71 Aligned_cols=109 Identities=12% Similarity=0.040 Sum_probs=68.2
Q ss_pred ccCCCCCccccCccCCCeee-cCCccc-----cceECCCCEEc-ceEEee---------------eEEccCcEECCCcEE
Q 014953 295 FYDATKPIYTSRRNLPPSKI-DDSKIV-----DSIISHGSFIT-SSFIEH---------------SVVGIRSRINANVHL 352 (415)
Q Consensus 295 ~~~~~~~~~~~~~i~~~~~i-~~~~i~-----~~~ig~~~~I~-~~~i~~---------------svig~~~~ig~~~~i 352 (415)
++++.+.+...+.|++++.| +++.|. ++.||++|.|+ ++.|.. ++||++|.|++++.|
T Consensus 47 ~I~~~a~i~~~v~IG~~~~I~~~~~I~~~~~~~v~IG~~~~Ig~~~~I~~~~~~~~ig~~~~~~~~~IG~~v~Ig~~~~I 126 (213)
T 3kwd_A 47 YVHSFSNLIGDVRIKDYVHIAPGTSIRADEGTPFHIGSRTNIQDGVVIHGLQQGRVIGDDGQEYSVWIGDNVSITHMALI 126 (213)
T ss_dssp EECTTSEEEESEEECTTCEECTTCEEEESSSCCEEECTTCEECTTCEEEECSSCCEECTTSCEESEEECTTCEECTTCEE
T ss_pred EECCCCEEeCceEECCCCEEcCCcEEecCCCCceEECCCCEECCCCEEEecCCCceeccCCcccceEECCCcEECCCcEE
Confidence 34455555555566666666 556663 36778888887 577753 778888888888888
Q ss_pred ee-cEEeCCccccchhHHH-hhhhCCCcceEeCCCCEEeeeEECCCeEEcCCcccC
Q 014953 353 KD-TMMLGADFYETDAEVA-SLLAEGRVPVGIGENTKIKYEQLKPICHIVETKYDS 406 (415)
Q Consensus 353 ~~-sii~~~~~~~~~~~~~-~~~~~~~~~~~Ig~~~~i~~~~i~~~~~i~~~~~~~ 406 (415)
.+ ++|++++.|+.++.+. +.++++ |.||+++.|.+++|++++.|++++.+.
T Consensus 127 ~~~v~Ig~~v~IG~~a~I~~~~Ig~~---~~Igags~V~~~~i~~~~~v~~~~vv~ 179 (213)
T 3kwd_A 127 HGPAYIGDGCFIGFRSTVFNARVGAG---CVVMMHVLIQDVEIPPGKYVPSGMVIT 179 (213)
T ss_dssp EEEEEECTTCEECTTCEEEEEEECTT---CEECSSCEEESCEECTTBEECTTCEEC
T ss_pred cCCCEECCCCEECCCCEEeCcEECCC---CEEcCCCEECCcEeCCCCEECCCcEEc
Confidence 77 7777776666555443 234444 555555555555556666666555443
No 71
>3r1w_A Carbonic anhydrase; beta-helix, lyase; 1.73A {Unidentified}
Probab=99.13 E-value=1.3e-10 Score=100.84 Aligned_cols=56 Identities=14% Similarity=0.054 Sum_probs=33.6
Q ss_pred EEccCcEECCCcEEeecEEeCCccccchhHHHhhhhCCCcceEeCCCCEEe-eeEECCCeEEcCCcccC--ccccccc
Q 014953 339 VVGIRSRINANVHLKDTMMLGADFYETDAEVASLLAEGRVPVGIGENTKIK-YEQLKPICHIVETKYDS--STISRFS 413 (415)
Q Consensus 339 vig~~~~ig~~~~i~~sii~~~~~~~~~~~~~~~~~~~~~~~~Ig~~~~i~-~~~i~~~~~i~~~~~~~--~~~~~~~ 413 (415)
+||++|.||+++.|.+++|+++ |.||.+|.|. ++.||+++.|++++.+. +.|-+++
T Consensus 89 ~Ig~~~~Ig~~~~i~~~~Ig~~-------------------~~Ig~~~~i~~~v~Ig~~~~Ig~~s~V~~g~~i~~~~ 147 (189)
T 3r1w_A 89 IIGDDVTIGHQAMLHGCTIGNR-------------------VLIGMKSMIMDGAIVEDEVIVAAGATVSPGKVLESGF 147 (189)
T ss_dssp EECSSEEECTTCEEESCEECSS-------------------EEECTTCEECTTCEECSSCEECTTCEECTTCEECTTE
T ss_pred EECCCCEECCCCEEeCcEECCC-------------------cEECCCCEEcCCCEECCCCEEccCCEECCCCEeCCCC
Confidence 5555555555555555555555 6666666664 66666666666666655 4554443
No 72
>3tv0_A Dynactin subunit 6; LEFT-handed beta-helix, ARP11, cytosol, structural; 2.15A {Homo sapiens}
Probab=99.13 E-value=7.8e-11 Score=102.65 Aligned_cols=27 Identities=15% Similarity=-0.044 Sum_probs=13.5
Q ss_pred eEeCCCCEEe-eeEECCCeEEcCCcccC
Q 014953 380 VGIGENTKIK-YEQLKPICHIVETKYDS 406 (415)
Q Consensus 380 ~~Ig~~~~i~-~~~i~~~~~i~~~~~~~ 406 (415)
|.||.+|.|. ++.||++|.|++++.+.
T Consensus 109 ~~Ig~~~~I~~gv~IG~~~~IgagsvV~ 136 (194)
T 3tv0_A 109 NVIESKAYVGRNVILTSGCIIGACCNLN 136 (194)
T ss_dssp CEECTTCEECTTEEECSSCEECTTCEEC
T ss_pred ceecceeeECCeEEECCCCEECCCCEEC
Confidence 4455555554 55555555555554443
No 73
>3vbi_A ANTD, galactoside O-acetyltransferase; anthrose, acylated sugar, LEFT-handed beta helix, sugar N-AC transferase; HET: COA 0FX; 1.80A {Bacillus cereus} PDB: 3vbj_A* 3vbm_A* 3vbk_A* 3vbp_A* 3vbl_A* 3vbn_A*
Probab=99.13 E-value=1.4e-10 Score=102.05 Aligned_cols=90 Identities=16% Similarity=0.101 Sum_probs=55.8
Q ss_pred ceECCCCEEc-ceEEe-eeEEccCcEECCCcEE----eecEEeCCccccchhHHH-------------------------
Q 014953 322 SIISHGSFIT-SSFIE-HSVVGIRSRINANVHL----KDTMMLGADFYETDAEVA------------------------- 370 (415)
Q Consensus 322 ~~ig~~~~I~-~~~i~-~svig~~~~ig~~~~i----~~sii~~~~~~~~~~~~~------------------------- 370 (415)
+.||++|.|+ ++.|. ++.||++|.|++++.| .+++|++++.|+.++.+.
T Consensus 53 v~IG~~~~I~~~~~I~~~v~IG~~~~I~~~~~I~~~~~~~~IG~~~~Ig~~~~I~~~~~~~~~~~~~~~~~~~~~~~~~~ 132 (205)
T 3vbi_A 53 ISIGNNVRIDDFCILSGKVTIGSYSHIAAYTALYGGEVGIEMYDFANISSRTIVYAAIDDFSGNALMGPTIPNQYKNVKT 132 (205)
T ss_dssp EEECSSEEECTTCEEEEEEEECSSEEECTTCEEEEEEEEEEECTTCEECTTCEEESEECCCSSSSCCSTTSCGGGCCCEE
T ss_pred eEECCCCEECCCCEEccceEECCCCEECCCeEEEcCCccEEECCCCEECCCcEEEeCCCCcccccccCcccccccceecc
Confidence 4444444444 34442 4555555555555555 225555555555554441
Q ss_pred --hhhhCCCcceEeCCCCEEe-eeEECCCeEEcCCcccCcccccccc
Q 014953 371 --SLLAEGRVPVGIGENTKIK-YEQLKPICHIVETKYDSSTISRFSL 414 (415)
Q Consensus 371 --~~~~~~~~~~~Ig~~~~i~-~~~i~~~~~i~~~~~~~~~~~~~~~ 414 (415)
..|+++ |.||.+|.|. ++.||+++.|++++.+.+.+..++.
T Consensus 133 ~~v~IG~~---v~IG~~~~I~~gv~Ig~~~~Ig~gsvV~~~v~~~~v 176 (205)
T 3vbi_A 133 GKVILKKH---VIIGAHSIIFPNVVIGEGVAVGAMSMVKESLDDWYI 176 (205)
T ss_dssp CCEEECTT---CEECTTCEECSSCEECTTCEECTTCEECSCBCTTEE
T ss_pred CCEEECCC---CEECCCCEEcCCCEECCCCEEcCCCEECCccCCCeE
Confidence 234444 8888888887 8999999999999988888877664
No 74
>3pmo_A UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltr; lipid A biosynthesis pathway, transferase; 1.30A {Pseudomonas aeruginosa}
Probab=99.11 E-value=3.2e-10 Score=108.61 Aligned_cols=45 Identities=7% Similarity=-0.090 Sum_probs=24.1
Q ss_pred EEecCCHHHHHHHHHhhcCCC-CCCCccCCCCCccccCccCCCeee
Q 014953 270 WEDIGTIRSFFEANLALTAHP-PMFSFYDATKPIYTSRRNLPPSKI 314 (415)
Q Consensus 270 ~~di~t~~~y~~an~~~l~~~-~~~~~~~~~~~~~~~~~i~~~~~i 314 (415)
+.-+.+|+..+.....++... .....++|.+.+.+++.++++++|
T Consensus 95 ~l~~~~p~~~~~~~~~~~~~~~~~~~~i~p~a~i~~~a~Ig~~~~I 140 (372)
T 3pmo_A 95 ALVVANPYLAYASLSHLFDRKPKAAAGIHPTAIVAADAEVDPSASV 140 (372)
T ss_dssp EEECSCHHHHHHHHHGGGCCCCCCCSEECTTCEECTTCEECTTCEE
T ss_pred EEEECCHHHHHHHHHHHhccccccccccCCCCEECCCCEECCCCEE
Confidence 455677776665545555433 223345666555555555555544
No 75
>1j2z_A Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosam acyltransferase; UDP-N-acetylglucosamine acyltransferase, LPXA, LEFT-handed B structure; HET: SOG TLA; 2.10A {Helicobacter pylori} SCOP: b.81.1.1
Probab=99.09 E-value=1.6e-10 Score=105.93 Aligned_cols=35 Identities=20% Similarity=0.323 Sum_probs=20.3
Q ss_pred eEeCCCCEEe-eeEECCCeEEcCCcccCcccccccc
Q 014953 380 VGIGENTKIK-YEQLKPICHIVETKYDSSTISRFSL 414 (415)
Q Consensus 380 ~~Ig~~~~i~-~~~i~~~~~i~~~~~~~~~~~~~~~ 414 (415)
|.||.++.|. ++.||+++.|++++.+.+.+-+|++
T Consensus 147 ~~Ig~~a~V~~~v~IG~~a~Ig~~s~V~~dvp~~~~ 182 (270)
T 1j2z_A 147 VNIGGLTAIHQFVRIAKGCMIAGKSALGKDVPPYCT 182 (270)
T ss_dssp CEECTTCEECTTCEECTTCEECTTCEECSBBCTTEE
T ss_pred eEEecCCEECCCcEeCCceEEecCcEecccCCCCeE
Confidence 3444444444 5666666666666666666666654
No 76
>4eqy_A Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosam acyltransferase; ssgcid, beta helix, structural genomics, seattle structural center for infectious disease, transferase; 1.80A {Burkholderia thailandensis}
Probab=99.05 E-value=3.1e-10 Score=104.86 Aligned_cols=35 Identities=11% Similarity=0.165 Sum_probs=18.9
Q ss_pred eEeCCCCEEe-eeEECCCeEEcCCcccCcccccccc
Q 014953 380 VGIGENTKIK-YEQLKPICHIVETKYDSSTISRFSL 414 (415)
Q Consensus 380 ~~Ig~~~~i~-~~~i~~~~~i~~~~~~~~~~~~~~~ 414 (415)
|.||.++.|. ++.|++++.|++++.+.+.+-+|++
T Consensus 168 ~~Ig~~a~V~~~v~Ig~~~vvg~~s~V~~dvp~~~~ 203 (283)
T 4eqy_A 168 AIVGGMSGVHQYVRIGAHSMLGGASALVQDIPPFVI 203 (283)
T ss_dssp CEECTTCEECTTCEECTTCEECTTCEECSBBCTTEE
T ss_pred eEEecCCEEcCCeEECCCcEECCCCeEecccCCCcE
Confidence 3344444444 4555555556666666666666553
No 77
>3hsq_A Acyl-[acyl-carrier-protein]--UDP-N- acetylglucosamine O-acyltransferase; L.interrogans LPXA, LPXA, LPXA acyltransferase; 2.10A {Leptospira interrogans} SCOP: b.81.1.0 PDB: 3i3a_A* 3i3x_A*
Probab=99.05 E-value=2.5e-10 Score=104.08 Aligned_cols=91 Identities=11% Similarity=0.125 Sum_probs=50.7
Q ss_pred cceECCCCEEc-ceEE--------------eeeEEccCcEECCCcEEe-------ecEEeCCccccchhHHH--------
Q 014953 321 DSIISHGSFIT-SSFI--------------EHSVVGIRSRINANVHLK-------DTMMLGADFYETDAEVA-------- 370 (415)
Q Consensus 321 ~~~ig~~~~I~-~~~i--------------~~svig~~~~ig~~~~i~-------~sii~~~~~~~~~~~~~-------- 370 (415)
++.||++|.|+ ++.| .+++||++|.|++++.|. ++.|++++.+..++.+.
T Consensus 48 ~~~IG~~~~I~~~a~Ig~~~~~~~~~g~~~~~v~IG~~~~Ig~~~~I~~~~~~~~~~~IG~~~~I~~~~~I~~~~~IG~~ 127 (259)
T 3hsq_A 48 GSEIGKFNRFHQGAVIGVMPQDLGFNQQLLTKTVIGDHNIFREYSNIHKGTKEDSPTVIGNKNYFMGNSHVGHDCILGNN 127 (259)
T ss_dssp TEEECSSCEECTTCEEEECCSCTTCCTTSCCCEEECSSCEECTTCEEECCSBTTBCEEECSSCEECTTCEECTTCEECSS
T ss_pred CcEECCCcEECCCCEECCCcccccccCccCCcEEECCCcEECCCCEECCCccCCCcEEECCCcEEcCCcEECCCcEECCc
Confidence 35666666666 4555 356777777777777776 34444443333332221
Q ss_pred ------------hhhhCCCcceEeCCCCEEe-eeEECCCeEEcCCcccCcccccccc
Q 014953 371 ------------SLLAEGRVPVGIGENTKIK-YEQLKPICHIVETKYDSSTISRFSL 414 (415)
Q Consensus 371 ------------~~~~~~~~~~~Ig~~~~i~-~~~i~~~~~i~~~~~~~~~~~~~~~ 414 (415)
+.++++ |.||.++.|. ++.||+++.|++++.+.+.+.+|++
T Consensus 128 ~~i~~~~~i~~~v~Igd~---~~Ig~~a~V~~~v~Ig~~~~Vg~~s~V~~dvp~~~~ 181 (259)
T 3hsq_A 128 NILTHGAVLAGHVTLGNF---AFISGLVAVHQFCFVGDYSMVAGLAKVVQDVPPYST 181 (259)
T ss_dssp CEECTTCEECTTCEECSS---CEECSSEEECTTCEECTTCEECSSEEECSBBCTTEE
T ss_pred cEEcCCceECCccEECCC---cEEeCCCEECCCCEECCCCEECCCCEEcccCCCCcE
Confidence 122333 4444445554 5666666677777777777776664
No 78
>3r0s_A Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosam acyltransferase; structural genomics; 2.30A {Campylobacter jejuni subsp} SCOP: b.81.1.0
Probab=99.05 E-value=3.2e-10 Score=103.84 Aligned_cols=91 Identities=21% Similarity=0.242 Sum_probs=51.9
Q ss_pred cceECCCCEEc-ceEE--------------eeeEEccCcEECCCcEEee--------cEEeCCccccchhHH--------
Q 014953 321 DSIISHGSFIT-SSFI--------------EHSVVGIRSRINANVHLKD--------TMMLGADFYETDAEV-------- 369 (415)
Q Consensus 321 ~~~ig~~~~I~-~~~i--------------~~svig~~~~ig~~~~i~~--------sii~~~~~~~~~~~~-------- 369 (415)
++.||++|.|+ ++.| .+++||++|.|++++.|.. +.|++++.+..++.+
T Consensus 52 ~~~IG~~~~I~~~a~I~~~~~~~~~~g~~~~~v~IG~~~~Ig~~~~I~~~~~~~~~~~~IG~~~~I~~~~~I~~~~~IG~ 131 (266)
T 3r0s_A 52 DTTIGDHSRVFSYAIVGDIPQDISYKEEQKSGVVIGKNATIREFATINSGTAKGDGFTRIGDNAFIMAYCHIAHDCLLGN 131 (266)
T ss_dssp SCEECTTCEECTTCEEEECCSCSCCC----CEEEECTTCEECTTCEEECCCTTTTSEEEECTTCEECTTCEECTTCEECS
T ss_pred CcEECCCcEEccCceeccCCccccccCCcCceEEECCCCEECCceEecCCcccCCccEEECCCceeCCcceEccccccCC
Confidence 45666666666 4556 4666777777776666653 444444443333322
Q ss_pred ----------H--hhhhCCCcceEeCCCCEEe-eeEECCCeEEcCCcccCcccccccc
Q 014953 370 ----------A--SLLAEGRVPVGIGENTKIK-YEQLKPICHIVETKYDSSTISRFSL 414 (415)
Q Consensus 370 ----------~--~~~~~~~~~~~Ig~~~~i~-~~~i~~~~~i~~~~~~~~~~~~~~~ 414 (415)
. ..++++ |.||.++.|. ++.||+++.|++++.+.+.+.+|++
T Consensus 132 ~~~i~~~~~i~~~v~Igd~---~~Ig~~a~V~~~v~Ig~~a~Vg~~s~V~~dvp~~~~ 186 (266)
T 3r0s_A 132 NIILANNATLAGHVELGDF---TVVGGLTPIHQFVKVGEGCMIAGASALSQDIVPFCL 186 (266)
T ss_dssp SCEECTTCEECTTCEECTT---CEECTTCEECTTCEECTTCEECSSCBBCSCBCTTEE
T ss_pred CeEECCCceecCCeEECCC---cEEccCCEECCCcEECCCCEEccCCeEecccCCCeE
Confidence 1 223333 4455555554 5666777777777777777777764
No 79
>3t57_A UDP-N-acetylglucosamine O-acyltransferase domain- protein; LEFT-handed parallel beta helix, lipid A biosynthesis, lipid synthesis; 2.10A {Arabidopsis thaliana}
Probab=99.04 E-value=3.9e-10 Score=105.31 Aligned_cols=58 Identities=9% Similarity=0.039 Sum_probs=29.5
Q ss_pred ccCCCCCccccCccCCCeee-cCCccc-cceECCCCEEc-ceEEe-eeEEccCcEECCCcEE
Q 014953 295 FYDATKPIYTSRRNLPPSKI-DDSKIV-DSIISHGSFIT-SSFIE-HSVVGIRSRINANVHL 352 (415)
Q Consensus 295 ~~~~~~~~~~~~~i~~~~~i-~~~~i~-~~~ig~~~~I~-~~~i~-~svig~~~~ig~~~~i 352 (415)
.++|.+.+.+++.+++++.| +++.|. ++.||++|.|+ ++.|. ++.||++|.|++++.|
T Consensus 9 ~I~p~A~I~~~a~Ig~~v~Ig~~~~I~~~v~IG~~~~I~~~~~I~g~~~IG~~~~I~~~a~I 70 (305)
T 3t57_A 9 LIHPSAVVHPNAVIGKGVSVGPYCTIGSSVKLGNGCKLYPSSHVFGNTELGESCVLMTGAVV 70 (305)
T ss_dssp CBCTTSEECTTSEECTTCEECTTCEECTTEEECTTCEECTTCEECSSEEECTTCEECTTCEE
T ss_pred eECCCCEECCCCEECCCCEECCCCEECCCCEECCCCEECCCcEECCCcEECCCcEEccCcEe
Confidence 45555555555555555555 444443 45555555555 34443 4444444444444444
No 80
>2ggo_A 401AA long hypothetical glucose-1-phosphate thymidylyltransferase; beta barrel; 1.80A {Sulfolobus tokodaii} PDB: 2ggq_A*
Probab=99.01 E-value=2.4e-10 Score=111.13 Aligned_cols=85 Identities=24% Similarity=0.330 Sum_probs=61.0
Q ss_pred ccccCccCCCeee-cCCcc------c-cceECCCCEEc-ceEEe-eeEEccCcEECCCcEEeecEEeCCccccchhHHH-
Q 014953 302 IYTSRRNLPPSKI-DDSKI------V-DSIISHGSFIT-SSFIE-HSVVGIRSRINANVHLKDTMMLGADFYETDAEVA- 370 (415)
Q Consensus 302 ~~~~~~i~~~~~i-~~~~i------~-~~~ig~~~~I~-~~~i~-~svig~~~~ig~~~~i~~sii~~~~~~~~~~~~~- 370 (415)
+.+.+.+.+++.+ +++.| . ++.||++|.|+ ++.|. +++||++|.||+++.|.+++|++++.|+.++.+.
T Consensus 235 i~~~~~i~~~~~ig~~~~I~~~~~i~~~~~Ig~~~~I~~~~~i~~~~~Ig~~~~ig~~~~i~~~~i~~~~~i~~~~~i~~ 314 (401)
T 2ggo_A 235 VEDNVKIKGKVIIEEDAEIKSGTYIEGPVYIGKGSEIGPNSYLRPYTILVEKNKIGASVEVKESVIMEGSKIPHLSYVGD 314 (401)
T ss_dssp ECSSCEEESCEEECTTCEECTTCEEESSEEECTTCEECSSCEECTTEEECSSCEEEETCEEESEEECTTCEEEESCEEES
T ss_pred eCCCCEEcCCeEEcCCCEECCCCEEeCCeEECCCCEECCCCEEcCCcEECCCCEECCCCEEecCEEcCCcEECCCceEcc
Confidence 4455555555555 34444 2 56788888887 67775 7999999999999999999999998888877663
Q ss_pred hhhhCCCcceEeCCCCEEe
Q 014953 371 SLLAEGRVPVGIGENTKIK 389 (415)
Q Consensus 371 ~~~~~~~~~~~Ig~~~~i~ 389 (415)
+.++++ |.||++|.|.
T Consensus 315 ~~Ig~~---~~Ig~~~~i~ 330 (401)
T 2ggo_A 315 SVIAED---VNFGAGTLIA 330 (401)
T ss_dssp CEECTT---CEECTTCEEC
T ss_pred eEECCC---cEECCCcEEc
Confidence 355666 6666666654
No 81
>1qre_A Carbonic anhydrase; beta-helix, lyase; 1.46A {Methanosarcina thermophila} SCOP: b.81.1.5 PDB: 1qq0_A 1qrf_A 1qrg_A 1qrm_A 1qrl_A 1thj_A 3otm_A 3ow5_A 3ou9_A 3otz_A 3oup_A
Probab=99.01 E-value=1.1e-09 Score=99.04 Aligned_cols=65 Identities=9% Similarity=-0.028 Sum_probs=40.8
Q ss_pred eEEccCcEECCCcEEee-cEEeCCccccchhHHH-hhhhCCCcceEeCCCCEEeeeEECCCeEEcCCccc
Q 014953 338 SVVGIRSRINANVHLKD-TMMLGADFYETDAEVA-SLLAEGRVPVGIGENTKIKYEQLKPICHIVETKYD 405 (415)
Q Consensus 338 svig~~~~ig~~~~i~~-sii~~~~~~~~~~~~~-~~~~~~~~~~~Ig~~~~i~~~~i~~~~~i~~~~~~ 405 (415)
++||++|.||+++.|.+ ++|++++.|+.++.+. +.++++ |.||.++.|.++.|++++.|++++.+
T Consensus 141 v~IG~~v~Ig~~~~I~~~~~Ig~~v~IG~~a~I~~v~Ig~~---~~IgagsvV~~~~I~~~~~v~~g~vv 207 (247)
T 1qre_A 141 VYIGNNVSLAHQSQVHGPAAVGDDTFIGMQAFVFKSKVGNN---CVLEPRSAAIGVTIPDGRYIPAGMVV 207 (247)
T ss_dssp EEECTTCEECTTCEEEEEEEECTTCEECTTCEEEEEEECTT---CEECTTCEEESCEECTTBEECTTCEE
T ss_pred eEECCCCEECCCCEEcCCcEECCCCEECCCCEEeceEECCC---CEECCCCEECCeEeCCCCEECCCCEE
Confidence 67777777777777777 7777776666665443 244555 55555555555555666666555543
No 82
>4eqy_A Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosam acyltransferase; ssgcid, beta helix, structural genomics, seattle structural center for infectious disease, transferase; 1.80A {Burkholderia thailandensis}
Probab=99.00 E-value=4.2e-10 Score=104.00 Aligned_cols=82 Identities=11% Similarity=0.108 Sum_probs=51.0
Q ss_pred cceECCCCEEc-ceEE-------------eeeEEccCcEECCCcEEee--------cEEeCCccccchhHHH--hhhhCC
Q 014953 321 DSIISHGSFIT-SSFI-------------EHSVVGIRSRINANVHLKD--------TMMLGADFYETDAEVA--SLLAEG 376 (415)
Q Consensus 321 ~~~ig~~~~I~-~~~i-------------~~svig~~~~ig~~~~i~~--------sii~~~~~~~~~~~~~--~~~~~~ 376 (415)
++.||++|.|+ ++.| .+++||++|.|++++.|.. ++|++++.+..++.+. +.++++
T Consensus 70 ~~~IG~~~~I~~~a~Ig~~~~~~~~~g~~~~v~IG~~~~Ig~~~~I~~g~~~~~~~~~IG~~~~I~~~~~I~~~~~IG~~ 149 (283)
T 4eqy_A 70 HTTIGEDNRIGHYASVGGRPQDMKYKDEPTRLVIGDRNTIREFTTIHTGTVQDAGVTTLGDDNWIMAYVHIGHDCRVGSH 149 (283)
T ss_dssp EEEECSSCEECTTEEEEECCCCTTCCCCCCEEEECSSCEECTTEEEECCCTTTTSEEEECSSCEECTTCEECTTCEECSS
T ss_pred CcEECCCcEEcCCcEECCCCccccccCCCceEEECCCcccCcceeEccceecCCCceEECCCcEECceeEEcCCcEECCC
Confidence 67788888887 5777 3788888888888888875 6677776666665442 344444
Q ss_pred CcceEeCCCCEEe-eeEECCCeEEcCCccc
Q 014953 377 RVPVGIGENTKIK-YEQLKPICHIVETKYD 405 (415)
Q Consensus 377 ~~~~~Ig~~~~i~-~~~i~~~~~i~~~~~~ 405 (415)
|.|+.++.+. +++||+++.|+.++.+
T Consensus 150 ---v~i~~~~~i~~~v~Igd~~~Ig~~a~V 176 (283)
T 4eqy_A 150 ---VVLSSNAQMAGHVEIGDWAIVGGMSGV 176 (283)
T ss_dssp ---CEECTTCEECTTCEECTTCEECTTCEE
T ss_pred ---cEECCCceEcCCcEECCCeEEecCCEE
Confidence 4444444443 3444444444444443
No 83
>3jqy_B NEUO, polysialic acid O-acetyltransferase; LEFT-handed beta-helix polysia; HET: PEG; 1.70A {Escherichia coli}
Probab=99.00 E-value=6.2e-10 Score=101.04 Aligned_cols=75 Identities=16% Similarity=0.134 Sum_probs=58.6
Q ss_pred cceECCCCEEc-ceEEe----eeEEccCcEECCCcEEeec--------------------EEeCCccccchhHHHhhhhC
Q 014953 321 DSIISHGSFIT-SSFIE----HSVVGIRSRINANVHLKDT--------------------MMLGADFYETDAEVASLLAE 375 (415)
Q Consensus 321 ~~~ig~~~~I~-~~~i~----~svig~~~~ig~~~~i~~s--------------------ii~~~~~~~~~~~~~~~~~~ 375 (415)
++.||++|.|+ ++.|. ++.||++|.||+++.|.++ +|+++
T Consensus 105 ~v~IG~~~~Ig~~~~I~~~~~~~~IG~~~~Ig~~~~I~~~~~~~~~~~~~~~~~~~~~~v~Igd~--------------- 169 (252)
T 3jqy_B 105 KVIIGRRTTIGAGFEVVTDKCNVTIGHDCMIARDVILRASDGHPIFDIHSKKRINWAKDIIISSY--------------- 169 (252)
T ss_dssp EEEECTTCEECTTCEEECSSSEEEECTTCEECSSEEEECSCSSCEEETTTCBBCCCCCCEEECSS---------------
T ss_pred EEEECCCCEECCCcEEEeCCCCeEECCCCEEcCCcEEecCCCcccccccccccccccCCeEEecC---------------
Confidence 56777777777 56666 7788888888888887775 44444
Q ss_pred CCcceEeCCCCEEe-eeEECCCeEEcCCcccCcccccccc
Q 014953 376 GRVPVGIGENTKIK-YEQLKPICHIVETKYDSSTISRFSL 414 (415)
Q Consensus 376 ~~~~~~Ig~~~~i~-~~~i~~~~~i~~~~~~~~~~~~~~~ 414 (415)
|.||.+|.|. ++.||+++.|++++.+.+.+-.+++
T Consensus 170 ----v~IG~~a~I~~gv~IG~~~~IgagsvV~~~vp~~~~ 205 (252)
T 3jqy_B 170 ----VWVGRNVSIMKGVSVGSGSVIGYGSIVTKDVPSMCA 205 (252)
T ss_dssp ----CEECSSEEECTTCEECTTCEECTTCEECSCBCTTEE
T ss_pred ----cEECCCCEECCCCEECCCCEECCCCEECcccCCCCE
Confidence 8899999887 8999999999999988888777664
No 84
>4e6u_A Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosam acyltransferase; lipopolysaccaride synthesis; 1.41A {Acinetobacter baumannii} PDB: 4e6t_A*
Probab=98.99 E-value=6.1e-10 Score=101.91 Aligned_cols=57 Identities=12% Similarity=0.253 Sum_probs=35.4
Q ss_pred cEEeCCccccchhHHH--hhhhCCCcceEeCCCCEEe-eeEECCCeEEcCCcccCcccccccc
Q 014953 355 TMMLGADFYETDAEVA--SLLAEGRVPVGIGENTKIK-YEQLKPICHIVETKYDSSTISRFSL 414 (415)
Q Consensus 355 sii~~~~~~~~~~~~~--~~~~~~~~~~~Ig~~~~i~-~~~i~~~~~i~~~~~~~~~~~~~~~ 414 (415)
+.|++++.+..++.+. ..++++ |.||.++.|. ++.|++++.|++++.+.+.+-+|++
T Consensus 129 ~~Ig~~~~i~~~~~i~~~v~Igd~---~~Ig~~a~V~~~v~Ig~~~~i~~~svV~~dvp~~~~ 188 (265)
T 4e6u_A 129 CIVGDHNIFANNVGVAGHVHIGDH---VIVGGNSGIHQFCKIDSYSMIGGASLILKDVPAYVM 188 (265)
T ss_dssp CEECSSCEECTTCEECTTCEECSS---CEECTTCEECTTCEECTTCEECTTCEECSBBCTTEE
T ss_pred EEECCCcEEcCCcEECCCcEECCC---eEEcCCCEECCCcEECCCCEEcCCCEEcccCCCCeE
Confidence 3444444444443332 344555 6666666666 6778888888888888887777764
No 85
>3fs8_A QDTC; acetyltransferase, natural product, deoxysugar; HET: ACO; 1.70A {Thermoanaerobacteriumthermosaccharolyticum} PDB: 3fsb_A* 3fsc_A*
Probab=98.99 E-value=7.5e-10 Score=101.81 Aligned_cols=74 Identities=18% Similarity=0.103 Sum_probs=42.8
Q ss_pred cCCCCCccccCccCCCeee-cCCccc-cceECCCCEEc-ceEEee---------------eEEccCcEECCCcEEe-ecE
Q 014953 296 YDATKPIYTSRRNLPPSKI-DDSKIV-DSIISHGSFIT-SSFIEH---------------SVVGIRSRINANVHLK-DTM 356 (415)
Q Consensus 296 ~~~~~~~~~~~~i~~~~~i-~~~~i~-~~~ig~~~~I~-~~~i~~---------------svig~~~~ig~~~~i~-~si 356 (415)
+++.+.+.+++.+++++.| +++.|. ++.||++|+|+ ++.|.+ ++||++|.|++++.|. +++
T Consensus 11 I~~~a~I~~~~~Ig~~~~Ig~~~~I~~~v~Ig~~~~I~~~~~I~~~~~~~~~~~~~~~~~~~Ig~~~~I~~~~~i~~~~~ 90 (273)
T 3fs8_A 11 IKEGVIIGENVTIEDNVYIDYGCIIRDNVHIKKGSFIGARSILGEYLVDFYNDRINKKHPLIIGENALIRTENVIYGDTI 90 (273)
T ss_dssp ECTTCEECSSEEECTTCEECTTCEECSSEEECTTCEECTTCEEEECCTTHHHHTCCCCCCEEECTTCEECTTCEEESSCE
T ss_pred ECCCcEECCCCEECCCcEECCCCEECCCCEECCCcEECCCcEeCCccccccccccccccceEECCCCEECCCCEEeCCCE
Confidence 4444445455555555555 445553 56666666666 455543 6777777777777763 466
Q ss_pred EeCCccccchhHH
Q 014953 357 MLGADFYETDAEV 369 (415)
Q Consensus 357 i~~~~~~~~~~~~ 369 (415)
|++++.|+.++.+
T Consensus 91 Ig~~~~Ig~~~~I 103 (273)
T 3fs8_A 91 IGDNFQTGHKVTI 103 (273)
T ss_dssp ECTTCEECSSCEE
T ss_pred ECCCCEECCceEE
Confidence 6666555555544
No 86
>3tv0_A Dynactin subunit 6; LEFT-handed beta-helix, ARP11, cytosol, structural; 2.15A {Homo sapiens}
Probab=98.98 E-value=8.6e-10 Score=95.99 Aligned_cols=77 Identities=18% Similarity=0.187 Sum_probs=47.3
Q ss_pred ceECCCCEEc-ceEEe-----------------eeEEccCcEECCCcEEeecEEeCCccccchhHHHhhhhCCCcceEeC
Q 014953 322 SIISHGSFIT-SSFIE-----------------HSVVGIRSRINANVHLKDTMMLGADFYETDAEVASLLAEGRVPVGIG 383 (415)
Q Consensus 322 ~~ig~~~~I~-~~~i~-----------------~svig~~~~ig~~~~i~~sii~~~~~~~~~~~~~~~~~~~~~~~~Ig 383 (415)
+.||++|.|+ ++.|. .++||+++.|+.++.+.++.|++++.|+.++.+. .+ |+||
T Consensus 52 i~IG~~~~I~~~~~I~~~~~~~~~~~~~~~~~~~~~Ig~~~~i~~~~~i~~~~Ig~~~~Ig~~~~I~----~g---v~IG 124 (194)
T 3tv0_A 52 IVIGEGNLIEEQALIINAYPDNITPDTEDPEPKPMIIGTNNVFEVGCYSQAMKMGDNNVIESKAYVG----RN---VILT 124 (194)
T ss_dssp EEECTTCEECTTCEEEECCCSCC---------CCEEECSSCEECTTCEECCSEECSSCEECTTCEEC----TT---EEEC
T ss_pred eEECCCccccCCcccccccccccccccccCcCCceEECCcceEecceeEeeeeecccceecceeeEC----Ce---EEEC
Confidence 4566666666 45552 3567777777777777777777776666655443 22 5666
Q ss_pred CCCEEe-eeEECCCeEEcCCccc
Q 014953 384 ENTKIK-YEQLKPICHIVETKYD 405 (415)
Q Consensus 384 ~~~~i~-~~~i~~~~~i~~~~~~ 405 (415)
+||.|. +++|.++++|++++.+
T Consensus 125 ~~~~IgagsvV~~~~~Ip~~svv 147 (194)
T 3tv0_A 125 SGCIIGACCNLNTFEVIPENTVI 147 (194)
T ss_dssp SSCEECTTCEECCCEEECTTEEE
T ss_pred CCCEECCCCEECCCcEECCCCEE
Confidence 666665 6666666666666543
No 87
>4e6u_A Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosam acyltransferase; lipopolysaccaride synthesis; 1.41A {Acinetobacter baumannii} PDB: 4e6t_A*
Probab=98.98 E-value=8.2e-10 Score=101.08 Aligned_cols=57 Identities=16% Similarity=0.096 Sum_probs=23.9
Q ss_pred cCCCCCccccCccCCCeee-cCCccc-cceECCCCEEc-ceEEe-eeEEccCcEECCCcEE
Q 014953 296 YDATKPIYTSRRNLPPSKI-DDSKIV-DSIISHGSFIT-SSFIE-HSVVGIRSRINANVHL 352 (415)
Q Consensus 296 ~~~~~~~~~~~~i~~~~~i-~~~~i~-~~~ig~~~~I~-~~~i~-~svig~~~~ig~~~~i 352 (415)
++|.+.+.+.+.+++++.| +++.|. ++.||++|.|+ ++.|. ++.||++|.|++++.|
T Consensus 10 I~p~a~i~~~a~Ig~~v~Ig~~~~I~~~v~IG~~~~I~~~~~I~~~~~IG~~~~I~~~a~I 70 (265)
T 4e6u_A 10 IHSTAIIDPSAVIASDVQIGPYCIIGPQVTIGAGTKLHSHVVVGGFTRIGQNNEIFQFASV 70 (265)
T ss_dssp BCTTCEECTTCEECTTCEECTTCEECTTEEECTTCEECSSCEECSSEEECSSCEECTTCEE
T ss_pred ECCCCEECCCCEECCCCEECCCeEECCCCEECCCCEEcCCcEEeCCcEECCCCEEcCCcEE
Confidence 3444444444444444444 333332 34444444444 33332 3444444444444444
No 88
>2qia_A UDP-N-acetylglucosamine acyltransferase; LEFT-handed parallel beta helix; HET: U20; 1.74A {Escherichia coli K12} SCOP: b.81.1.1 PDB: 1lxa_A 2jf3_A* 2aq9_A* 2qiv_X* 2jf2_A
Probab=98.97 E-value=1.1e-09 Score=100.09 Aligned_cols=35 Identities=9% Similarity=0.099 Sum_probs=21.2
Q ss_pred eEeCCCCEEe-eeEECCCeEEcCCcccCcccccccc
Q 014953 380 VGIGENTKIK-YEQLKPICHIVETKYDSSTISRFSL 414 (415)
Q Consensus 380 ~~Ig~~~~i~-~~~i~~~~~i~~~~~~~~~~~~~~~ 414 (415)
|.||.++.|. ++.||+++.|++++.+.+.+-+|++
T Consensus 151 ~~Ig~~~~I~~~v~Ig~~~~ig~~s~V~~~v~~~~~ 186 (262)
T 2qia_A 151 AIIGGMTAVHQFCIIGAHVMVGGCSGVAQDVPPYVI 186 (262)
T ss_dssp CEECTTCEECTTCEECTTCEECSSCEECSBBCTTEE
T ss_pred cEEccCCEECCCCEECCCCEEccCCEECCcCCCCeE
Confidence 4444444444 5666666777777777766666654
No 89
>3ixc_A Hexapeptide transferase family protein; niaid, ssgcid, seattle structural genomics center for infect disease, GRAM-negative bacteria; 1.61A {Anaplasma phagocytophilum}
Probab=98.97 E-value=2.2e-09 Score=93.19 Aligned_cols=103 Identities=12% Similarity=0.047 Sum_probs=73.9
Q ss_pred cCCCCCccccCccCCCeee-cCCccc----cceECCCCEEc-ceEEe------eeEEccCcEECCCcEEeecEEeCCccc
Q 014953 296 YDATKPIYTSRRNLPPSKI-DDSKIV----DSIISHGSFIT-SSFIE------HSVVGIRSRINANVHLKDTMMLGADFY 363 (415)
Q Consensus 296 ~~~~~~~~~~~~i~~~~~i-~~~~i~----~~~ig~~~~I~-~~~i~------~svig~~~~ig~~~~i~~sii~~~~~~ 363 (415)
+.+.+.+...+.++.++.| +++.|. ++.||++|.|+ ++.|. +++||++|.||+++.|.+++|++++.|
T Consensus 42 I~~~~~i~~~v~IG~~~~I~~~~~I~~~~~~i~IG~~~~I~~~~~I~~~~~~g~~~Ig~~~~Ig~~~~i~~~~Ig~~~~I 121 (191)
T 3ixc_A 42 IAGNARIIGDVCIGKNASIWYGTVLRGDVDKIEVGEGTNIQDNTVVHTDSMHGDTVIGKFVTIGHSCILHACTLGNNAFV 121 (191)
T ss_dssp ECTTCEEEEEEEECTTCEECTTCEEEEEEEEEEECTTCEECTTCEECC----CCEEECTTCEECTTCEECSCEECTTCEE
T ss_pred ECCCCEEeCCcEECCCCEECCCCEEecCCCCeEECCCCEECCCCEEeecCCcCCeEECCCCEECCCCEEECCEECCCCEE
Confidence 3344444444555566666 556664 34889999999 68887 899999999999999999999999988
Q ss_pred cchhHHHhhhhCCCcceEeCCCCEEe-eeEECCCeEEcCCccc
Q 014953 364 ETDAEVASLLAEGRVPVGIGENTKIK-YEQLKPICHIVETKYD 405 (415)
Q Consensus 364 ~~~~~~~~~~~~~~~~~~Ig~~~~i~-~~~i~~~~~i~~~~~~ 405 (415)
+.++.+.. + +.||++|.|. +++|.++..|++++..
T Consensus 122 g~~~~I~~----~---~~Ig~~~~Ig~gsvV~~~~~i~~~~~v 157 (191)
T 3ixc_A 122 GMGSIVMD----R---AVMEEGSMLAAGSLLTRGKIVKSGELW 157 (191)
T ss_dssp CTTCEECT----T---CEECTTCEECTTCEECTTCEECTTEEE
T ss_pred CCCCEEeC----C---eEECCCCEECCCCEECCCcCcCCCeEE
Confidence 88765432 2 5666666666 6666666666666543
No 90
>3eg4_A 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N- succinyltransferase; ssgcid, beta helix, acyltransferase, amino-acid biosynthesis, cytoplasm; 1.87A {Brucella suis}
Probab=98.96 E-value=1.2e-09 Score=101.36 Aligned_cols=73 Identities=15% Similarity=0.199 Sum_probs=46.6
Q ss_pred CCCCCccccCccCCCeeecCCcc-ccceECCCCEEc-ceEEe-eeEEccCcEECCCcEEee---------cEEeCCcccc
Q 014953 297 DATKPIYTSRRNLPPSKIDDSKI-VDSIISHGSFIT-SSFIE-HSVVGIRSRINANVHLKD---------TMMLGADFYE 364 (415)
Q Consensus 297 ~~~~~~~~~~~i~~~~~i~~~~i-~~~~ig~~~~I~-~~~i~-~svig~~~~ig~~~~i~~---------sii~~~~~~~ 364 (415)
.+.+.+..++.|++++.|....+ .++.||++|.|. ++.|. ++.||++|.|++++.|.+ ++|++++.|+
T Consensus 133 ~p~a~I~~~v~Ig~g~~I~~~~I~~~~~IG~~~~I~~~~~Ig~~~~IG~~v~I~~~~~i~~~~~~~~~~~v~IGd~v~IG 212 (304)
T 3eg4_A 133 VPNCIVRHSAYIAPNAILMPSFVNLGAYVDKGAMIDTWATVGSCAQIGKNVHLSGGVGIGGVLEPMQAGPTIIEDNCFIG 212 (304)
T ss_dssp CTTCEEBTTCEECTTCEECSEEECTTCEECTTCEECTTEEECTTCEECTTCEECTTCEECCCCSSTTCCCCEECTTCEEC
T ss_pred cCCEEECCCcEECCCCEEeCCEECCCCEECCCcEEcCCcEECCCCccCCCcEECCCCEECCccccCccCCeEEcCCCEEC
Confidence 34445555555666666522122 367777777777 46664 478888888888888877 7788886565
Q ss_pred chhHH
Q 014953 365 TDAEV 369 (415)
Q Consensus 365 ~~~~~ 369 (415)
.++.+
T Consensus 213 ~~a~I 217 (304)
T 3eg4_A 213 ARSEV 217 (304)
T ss_dssp TTCEE
T ss_pred CCCEE
Confidence 55433
No 91
>3gos_A 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N- succinyltransferase; 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransfera acyltransferase; 1.80A {Yersinia pestis} SCOP: b.81.1.2 PDB: 1kgq_A* 1kgt_A* 2tdt_A* 3tdt_A* 3bxy_A 1tdt_A
Probab=98.96 E-value=1.4e-09 Score=99.84 Aligned_cols=68 Identities=7% Similarity=0.187 Sum_probs=43.1
Q ss_pred CCCCccccCccCCCeee-cCCcc-ccceECCCCEEc-ceEEee-eEEccCcEECCCcEEee---------cEEeCCcccc
Q 014953 298 ATKPIYTSRRNLPPSKI-DDSKI-VDSIISHGSFIT-SSFIEH-SVVGIRSRINANVHLKD---------TMMLGADFYE 364 (415)
Q Consensus 298 ~~~~~~~~~~i~~~~~i-~~~~i-~~~~ig~~~~I~-~~~i~~-svig~~~~ig~~~~i~~---------sii~~~~~~~ 364 (415)
+.+.+..++.+++++.| ++ .+ .++.||++|.|+ ++.|.+ +.||++|.|++++.|.+ ++|++++.|+
T Consensus 109 p~a~I~~~~~Ig~g~~I~~~-~i~~~~~IG~~~~I~~~~~Ig~~~~IG~~v~I~~~~~i~g~~~~~~~~~v~IGd~v~IG 187 (276)
T 3gos_A 109 PPATVRKGAFIARNTVLMPS-YVNIGAFVDEGTMVDTWATVGSCAQIGKNVHLSGGVGIGGVLEPLQANPTIIEDNCFVG 187 (276)
T ss_dssp TTCEEBTTCEECTTCEECSE-EECTTCEECTTCEECTTEEECTTCEECTTCEECTTCEECCCCSSTTSCCCEECTTCEEC
T ss_pred CCcEECCCCEECCCCEEcCC-EEcCCeEECCCCEECCCCEECCCCEECCCCEECCCCEECCccccCCCCCeEECCCCEEC
Confidence 34444555555555555 22 22 267788888887 577754 88888888888888753 6777774444
Q ss_pred ch
Q 014953 365 TD 366 (415)
Q Consensus 365 ~~ 366 (415)
.+
T Consensus 188 ~~ 189 (276)
T 3gos_A 188 AR 189 (276)
T ss_dssp TT
T ss_pred CC
Confidence 44
No 92
>1xhd_A Putative acetyltransferase/acyltransferase; structural genomics, protein structure initiative, medwest C structural genomics, MCSG; 1.90A {Bacillus cereus} SCOP: b.81.1.5 PDB: 3vnp_A 2eg0_A
Probab=98.95 E-value=3.4e-09 Score=90.38 Aligned_cols=90 Identities=16% Similarity=0.132 Sum_probs=60.4
Q ss_pred ccCCCeee-cCCcc-ccceECCCCEEc-ceEEee----eEEccCcEECCCcEEe-----ecEEeCCccccchhHHHhhhh
Q 014953 307 RNLPPSKI-DDSKI-VDSIISHGSFIT-SSFIEH----SVVGIRSRINANVHLK-----DTMMLGADFYETDAEVASLLA 374 (415)
Q Consensus 307 ~i~~~~~i-~~~~i-~~~~ig~~~~I~-~~~i~~----svig~~~~ig~~~~i~-----~sii~~~~~~~~~~~~~~~~~ 374 (415)
.+++++.+ +++.+ .++.||++|.|+ ++.|.. ++||++|.|++++.|. +++|++++.|+.++.+.
T Consensus 14 ~ig~~~~I~~~~~i~~~v~IG~~~~I~~~~~i~~~~~~v~IG~~~~I~~~~~I~~~~~~~~~Ig~~~~Ig~~~~i~---- 89 (173)
T 1xhd_A 14 KIASSAFIADYVTITGDVYVGEESSIWFNTVIRGDVSPTIIGDRVNVQDQCTLHQSPQYPLILEDDVTVGHQVILH---- 89 (173)
T ss_dssp EECTTCEECTTCEEEEEEEECTTCEECTTCEEEEEEEEEEECTTCEECTTCEEECCTTCCEEECTTCEECTTCEEE----
T ss_pred EECCCcEECCCCEEECCEEECCCcEEcCCcEEecCCCeEEECCCCEECCCCEEEeCCCCCeEECCCCEECCCCEEe----
Confidence 34444444 34444 477888888888 677754 8999999999999998 79999995555544332
Q ss_pred CCCcceEeCCCCEEe-eeEECCCeEEcCCcc
Q 014953 375 EGRVPVGIGENTKIK-YEQLKPICHIVETKY 404 (415)
Q Consensus 375 ~~~~~~~Ig~~~~i~-~~~i~~~~~i~~~~~ 404 (415)
+ +.||++|.|. +++|.++++|++++.
T Consensus 90 -~---~~Ig~~~~Ig~~~~i~~~~~Ig~~~~ 116 (173)
T 1xhd_A 90 -S---CHIKKDALIGMGSIILDGAEIGEGAF 116 (173)
T ss_dssp -S---CEECTTCEECTTCEECTTCEECTTCE
T ss_pred -C---CEECCCCEEcCCCEEcCCCEECCCCE
Confidence 1 4556666665 566666666665553
No 93
>3tk8_A 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N- succinyltransferase; ssgcid; 1.80A {Burkholderia pseudomallei}
Probab=98.94 E-value=1.4e-09 Score=101.09 Aligned_cols=68 Identities=6% Similarity=0.096 Sum_probs=36.3
Q ss_pred CCCccccCccCCCeee-cCCccccceECCCCEEc-ceEE-eeeEEccCcEECCCcEEee---------cEEeCCccccch
Q 014953 299 TKPIYTSRRNLPPSKI-DDSKIVDSIISHGSFIT-SSFI-EHSVVGIRSRINANVHLKD---------TMMLGADFYETD 366 (415)
Q Consensus 299 ~~~~~~~~~i~~~~~i-~~~~i~~~~ig~~~~I~-~~~i-~~svig~~~~ig~~~~i~~---------sii~~~~~~~~~ 366 (415)
...+..++.|++++.| ++....++.||++|.|. +++| .++.||++|.|++++.|.+ ++|++++.|+.+
T Consensus 151 ~a~I~~~~~IG~g~~I~~~~I~~g~~IG~~~~I~~~~~Ig~~~~IG~~v~I~~~~~I~~~~~~~~~~~v~IGd~v~IG~~ 230 (316)
T 3tk8_A 151 PAIARRGSFIAKNVVLMPSYTNIGAYVDEGTMVDTWATVGSCAQIGKNVHLSGGVGIGGVLEPLQANPVIIEDNCFIGAR 230 (316)
T ss_dssp TCEEBTTCEECTTCEECSEEECTTCEECTTCEECTTEEECTTCEECTTCEECTTCEECCCCSSTTSCCCEECTTCEECTT
T ss_pred CeEEeCCcEEcCCCEECCCEEeCCCEECCCCEEccceEECCCCEECCCCEEcCCCEECCCcccccCCCcEECCCCEECCC
Confidence 3344444444444444 22111255666666666 3555 3466677777776666665 566666444433
No 94
>3fs8_A QDTC; acetyltransferase, natural product, deoxysugar; HET: ACO; 1.70A {Thermoanaerobacteriumthermosaccharolyticum} PDB: 3fsb_A* 3fsc_A*
Probab=98.92 E-value=1.4e-09 Score=100.03 Aligned_cols=35 Identities=3% Similarity=-0.033 Sum_probs=27.2
Q ss_pred eEeCCCCEEe-eeEECCCeEEcCCcccCcccccccc
Q 014953 380 VGIGENTKIK-YEQLKPICHIVETKYDSSTISRFSL 414 (415)
Q Consensus 380 ~~Ig~~~~i~-~~~i~~~~~i~~~~~~~~~~~~~~~ 414 (415)
|.||.++.|. ++.||+++.|++++.+.+.+.++++
T Consensus 177 ~~IG~~~~I~~g~~IG~~~~IgagsvV~~dvp~~~~ 212 (273)
T 3fs8_A 177 AVIAARSVVLPGIHINEDALVGAGAVVTKDVPKETV 212 (273)
T ss_dssp CEECTTCEECTTCEECTTCEECTTCEECSCBCTTEE
T ss_pred eEEcCCCEEcCCCEECCCCEECCCCEECccCCCCcE
Confidence 6666677776 7888888888888888888877764
No 95
>2wlg_A Polysialic acid O-acetyltransferase; enzyme, LEFT-handed beta HEL; HET: SOP; 1.90A {Neisseria meningitidis serogroup Y} PDB: 2wld_A 2wle_A* 2wlf_A* 2wlc_A*
Probab=98.92 E-value=2.5e-09 Score=94.58 Aligned_cols=88 Identities=9% Similarity=-0.005 Sum_probs=52.7
Q ss_pred ceECCCCEEcceEE-----eeeEEccCcEECCCcEEeecE----EeCCccccchh--HHHhhhhCCCcceEeCCCCEEe-
Q 014953 322 SIISHGSFITSSFI-----EHSVVGIRSRINANVHLKDTM----MLGADFYETDA--EVASLLAEGRVPVGIGENTKIK- 389 (415)
Q Consensus 322 ~~ig~~~~I~~~~i-----~~svig~~~~ig~~~~i~~si----i~~~~~~~~~~--~~~~~~~~~~~~~~Ig~~~~i~- 389 (415)
+.||++|.|+.+.+ .+++||++|.|++++.|.++- .... .+... .-...|+++ |.||.+|.|.
T Consensus 80 ~~IG~~~~Ig~~~ii~~~~~~i~IG~~~~Ig~~~~I~~~~~h~~~~~~--~~~~~~~~~~v~Igd~---v~IG~~~~I~~ 154 (215)
T 2wlg_A 80 LQIQAKTTMGNGEITIAEKGKISIGKDCMLAHGYEIRNTDMHPIYSLE--NGERINHGKDVIIGNH---VWLGRNVTILK 154 (215)
T ss_dssp EEECTTCEECSEEEEECTTCEEEECTTCEECTTEEEESCCSSCEEETT--TCBBCCCCCCEEECTT---CEECTTCEECT
T ss_pred EEEcCCCEECCEEEEEeCCCCEEECCCCEEcCCEEEECCCCccccccc--ccccccCCCCeEECCC---cEECCCCEECC
Confidence 66677777764333 456677777777777766540 0000 00000 000123333 7888888887
Q ss_pred eeEECCCeEEcCCcccCcccccccc
Q 014953 390 YEQLKPICHIVETKYDSSTISRFSL 414 (415)
Q Consensus 390 ~~~i~~~~~i~~~~~~~~~~~~~~~ 414 (415)
++.||+++.|++++.+.+.+-+++.
T Consensus 155 gv~Ig~~~vIgagsvV~~~vp~~~i 179 (215)
T 2wlg_A 155 GVCIPNNVVVGSHTVLYKSFKEPNC 179 (215)
T ss_dssp TCEECSSCEECTTCEECSCCCCCSC
T ss_pred CCEECCCCEECCCCEEcCccCCCeE
Confidence 8899999999999988877766654
No 96
>3r3r_A Ferripyochelin binding protein; structural genomics, csgid, center for structural genomics O infectious diseases, all beta protein; 1.20A {Salmonella enterica subsp} SCOP: b.81.1.0 PDB: 3tio_A 3tis_A
Probab=98.90 E-value=5.7e-09 Score=90.16 Aligned_cols=92 Identities=14% Similarity=0.008 Sum_probs=55.9
Q ss_pred CCccccCccCCCeeecCCccccceECCCCEEc-ceEEe----eeEEccCcEECCCcEE------------eecEEeCCcc
Q 014953 300 KPIYTSRRNLPPSKIDDSKIVDSIISHGSFIT-SSFIE----HSVVGIRSRINANVHL------------KDTMMLGADF 362 (415)
Q Consensus 300 ~~~~~~~~i~~~~~i~~~~i~~~~ig~~~~I~-~~~i~----~svig~~~~ig~~~~i------------~~sii~~~~~ 362 (415)
..+..++.+.+++.+. .++.||++|.|+ ++.|. ++.||++|.|++++.| .+++|++++.
T Consensus 16 ~~ig~~~~I~~~~~i~----~~v~IG~~~~I~~~~~i~~~~~~i~IG~~~~I~~~~~I~~~~~~~~~~~~~~~~Ig~~~~ 91 (187)
T 3r3r_A 16 PGIGQRVMIDTSSVVI----GDVRLADDVGIWPLVVIRGDVNYVAIGARTNIQDGSVLHVTHKSSSNPHGNPLIIGEDVT 91 (187)
T ss_dssp CEECTTCEECTTCEEE----EEEEECTTCEECTTCEEEEEEEEEEECTTCEECTTCEEECBCCBTTBC-CBCEEECSSCE
T ss_pred cccCCCeEECCCCEEE----CceEECCCCEECCCcEEEcCCccEEECCCCEECCCCEEecCCccccCCCCCCeEECCCCE
Confidence 4444555555555552 367777777777 56664 3599999999999999 6788888844
Q ss_pred ccchhHHHhhhhCCCcceEeCCCCEEe-eeEECCCeEEcCCc
Q 014953 363 YETDAEVASLLAEGRVPVGIGENTKIK-YEQLKPICHIVETK 403 (415)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~~Ig~~~~i~-~~~i~~~~~i~~~~ 403 (415)
|+.++.+. + +.||++|.|. +|+|.++++|++++
T Consensus 92 Ig~~~~i~-----~---~~Ig~~~~Ig~~~~I~~~~~Ig~~~ 125 (187)
T 3r3r_A 92 VGHKVMLH-----G---CTIGNRVLVGMGSIVLDGAIIEDDV 125 (187)
T ss_dssp ECTTCEEE-----S---CEECSSEEECTTCEECTTCEECSSE
T ss_pred ECCCCEEe-----C---cEECCCCEECCCCEECCCCEECCCC
Confidence 44433331 1 3444444444 44444444444444
No 97
>3r8y_A 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N- acetyltransferase; structural genomics, csgid; 1.70A {Bacillus anthracis} PDB: 3cj8_A*
Probab=98.89 E-value=2.8e-09 Score=95.97 Aligned_cols=84 Identities=17% Similarity=0.108 Sum_probs=39.9
Q ss_pred cceECCCCEEc-ceEE-eeeEEccCcEECCCcEEe-ecEEeCCccccchhHHHhhhhCC-CcceEeCCCCEEe-eeEECC
Q 014953 321 DSIISHGSFIT-SSFI-EHSVVGIRSRINANVHLK-DTMMLGADFYETDAEVASLLAEG-RVPVGIGENTKIK-YEQLKP 395 (415)
Q Consensus 321 ~~~ig~~~~I~-~~~i-~~svig~~~~ig~~~~i~-~sii~~~~~~~~~~~~~~~~~~~-~~~~~Ig~~~~i~-~~~i~~ 395 (415)
++.||++|+|+ ++.| .+++||++|.|+.++.|. +++|+++++|+.++.+....... ..++.||++|.|. +|+|.+
T Consensus 103 ~v~Ig~~~~I~~~s~I~~~~~IG~~~~I~~~~~I~~~~~IG~~~~I~~~~~i~~~~~~~~~~~~~Ig~~~~IG~~~~I~~ 182 (240)
T 3r8y_A 103 HVEIGDNAVIMMNATINIGAVIGEGSMIDMNAVLGGRATVGKNCHVGAGAVLAGVIEPPSAKPVIVEDDVVIGANVVVLE 182 (240)
T ss_dssp SCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECCCCSCTTSCCCEECTTCEECTTCEECT
T ss_pred CcEECCCCEECCCCEECCCCEECCCCEECCCCEECCCCEECCCcEECCCcEECCCccCCCCCCcEECCCCEECCCCEECC
Confidence 45555555554 3444 345555555555555554 45555555554444432211000 0124555555554 555555
Q ss_pred CeEEcCCcc
Q 014953 396 ICHIVETKY 404 (415)
Q Consensus 396 ~~~i~~~~~ 404 (415)
+++|++++.
T Consensus 183 ~~~Ig~~~~ 191 (240)
T 3r8y_A 183 GVTVGKGAV 191 (240)
T ss_dssp TCEECTTCE
T ss_pred CcEECCCCE
Confidence 555555543
No 98
>2qia_A UDP-N-acetylglucosamine acyltransferase; LEFT-handed parallel beta helix; HET: U20; 1.74A {Escherichia coli K12} SCOP: b.81.1.1 PDB: 1lxa_A 2jf3_A* 2aq9_A* 2qiv_X* 2jf2_A
Probab=98.89 E-value=2.3e-09 Score=97.96 Aligned_cols=54 Identities=19% Similarity=0.216 Sum_probs=38.4
Q ss_pred CCccc-cceECCCCEEc-ceEEe-------------eeEEccCcEECCCcEEee--------cEEeCCccccchhHH
Q 014953 316 DSKIV-DSIISHGSFIT-SSFIE-------------HSVVGIRSRINANVHLKD--------TMMLGADFYETDAEV 369 (415)
Q Consensus 316 ~~~i~-~~~ig~~~~I~-~~~i~-------------~svig~~~~ig~~~~i~~--------sii~~~~~~~~~~~~ 369 (415)
++.|. ++.||++|.|+ ++.|. +++||++|.|++++.|.. ++|++++.+..++.+
T Consensus 47 ~~~I~~~~~IG~~~~I~~~~~I~~~~~~~~~~g~~~~~~IG~~~~Ig~~~~I~~~~~~~~~~~~IG~~~~Ig~~~~I 123 (262)
T 2qia_A 47 HVVVNGHTKIGRDNEIYQFASIGEVNQDLKYAGEPTRVEIGDRNRIRESVTIHRGTVQGGGLTKVGSDNLLMINAHI 123 (262)
T ss_dssp SCEECSEEEECSSCEECTTCEEEECCSCTTCCSCCCEEEECSSCEECTTCEEECCCTTTTSEEEECSSCEECTTCEE
T ss_pred CCEECCCcEECCCCEEecceEECcCCccccccCCccceEECCCceeCCCCEEcCCccCCCCcCEECCCcEEeeeeEE
Confidence 44443 67788888888 57774 688888888888888864 666766666665544
No 99
>3eh0_A UDP-3-O-[3-hydroxymyristoyl] glucosamine N- acyltransferase; LPXD, LEFT-handed parallel beta helix, acyl carrier protein, antibiotic resistance; 2.60A {Escherichia coli}
Probab=98.88 E-value=2.7e-09 Score=101.09 Aligned_cols=16 Identities=25% Similarity=0.422 Sum_probs=9.9
Q ss_pred eeEEccCcEECCCcEE
Q 014953 337 HSVVGIRSRINANVHL 352 (415)
Q Consensus 337 ~svig~~~~ig~~~~i 352 (415)
+++||++|.||+++.|
T Consensus 200 ~v~IGd~v~Ig~~~~I 215 (341)
T 3eh0_A 200 RVIIGDRVEIGACTTI 215 (341)
T ss_dssp CEEECSSCEECTTCEE
T ss_pred cEEECCCcEECCccEe
Confidence 3566666666666666
No 100
>3pmo_A UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltr; lipid A biosynthesis pathway, transferase; 1.30A {Pseudomonas aeruginosa}
Probab=98.88 E-value=3.3e-09 Score=101.55 Aligned_cols=20 Identities=5% Similarity=-0.019 Sum_probs=10.6
Q ss_pred eeEECCCeEEcCCcccCccc
Q 014953 390 YEQLKPICHIVETKYDSSTI 409 (415)
Q Consensus 390 ~~~i~~~~~i~~~~~~~~~~ 409 (415)
++.|++++.|+.++.+.+.+
T Consensus 298 ~v~Ig~~~vI~a~s~V~k~v 317 (372)
T 3pmo_A 298 HIEICDNVFVTGMTMVTRSI 317 (372)
T ss_dssp SCEECSSEEECTTCEECSCB
T ss_pred CCEECCCCEEeeCCEEccCc
Confidence 34455555555555555555
No 101
>3r5d_A Tetrahydrodipicolinate N-succinyletransferase; 1.80A {Pseudomonas aeruginosa} PDB: 3r5b_A* 3r5c_A* 3r5a_A
Probab=98.88 E-value=1.6e-09 Score=99.32 Aligned_cols=70 Identities=7% Similarity=-0.027 Sum_probs=41.5
Q ss_pred cCCCCCccccCccCCCeee-cCCccc-cceECCCCEEc-ceEEeeeEEccCcEECCCcEEee---------cEEeCCccc
Q 014953 296 YDATKPIYTSRRNLPPSKI-DDSKIV-DSIISHGSFIT-SSFIEHSVVGIRSRINANVHLKD---------TMMLGADFY 363 (415)
Q Consensus 296 ~~~~~~~~~~~~i~~~~~i-~~~~i~-~~~ig~~~~I~-~~~i~~svig~~~~ig~~~~i~~---------sii~~~~~~ 363 (415)
++|.+.+..++.|++++.| +++.|. ++.||.+|+|. ++.+ .++||++|.|++++.|.+ .+|++++.|
T Consensus 187 I~P~AvI~~GA~IGeGv~Igp~a~Vn~na~IGdg~iI~~~a~i-gv~IGdnv~IgpGa~IgG~~~~~~~~~V~IGdnv~I 265 (347)
T 3r5d_A 187 IADTARVRLGAYIGEGTTVMHEGFVNFNAGTEGPGMIEGRVSA-GVFVGKGSDLGGGCSTMGTLSGGGNIVISVGEGCLI 265 (347)
T ss_dssp ESSGGGBBTTEEECTTEEECTTCEECTTEEESSSEEECSEECT-TCEECTTEEECTTCEECC------CCCCEECTTCEE
T ss_pred ECCcCEECCCCEECCCCEECCCCEECCCCEECCCcEEcCCceE-eEEECCCCEECCCCEEccccCCCCccceEECCCCEE
Confidence 3444444444555555555 333332 56666666665 2333 488999999999988876 577777433
Q ss_pred cch
Q 014953 364 ETD 366 (415)
Q Consensus 364 ~~~ 366 (415)
+.+
T Consensus 266 GAn 268 (347)
T 3r5d_A 266 GAN 268 (347)
T ss_dssp CTT
T ss_pred CCC
Confidence 333
No 102
>1v3w_A Ferripyochelin binding protein; beta-helix, carbonic anhydrase, structural genomics, riken S genomics/proteomics initiative, RSGI, lyase; 1.50A {Pyrococcus horikoshii} SCOP: b.81.1.5 PDB: 1v67_A 2fko_A
Probab=98.88 E-value=9e-09 Score=87.75 Aligned_cols=91 Identities=18% Similarity=0.087 Sum_probs=55.5
Q ss_pred CccccCccCCCeeecCCccccceECCCCEEc-ceEEee----eEEccCcEECCCcEEe-----ecEEeCCccccchhHHH
Q 014953 301 PIYTSRRNLPPSKIDDSKIVDSIISHGSFIT-SSFIEH----SVVGIRSRINANVHLK-----DTMMLGADFYETDAEVA 370 (415)
Q Consensus 301 ~~~~~~~i~~~~~i~~~~i~~~~ig~~~~I~-~~~i~~----svig~~~~ig~~~~i~-----~sii~~~~~~~~~~~~~ 370 (415)
.+.+++.+.+++.+. .++.||++|.|+ ++.|.. ++||++|.|++++.|. +++|++++.|..++.+.
T Consensus 12 ~i~~~~~I~~~a~i~----g~v~IG~~~~I~~~~~i~~~~~~~~IG~~~~I~~~~~I~~~~~~~~~Ig~~~~I~~~~~i~ 87 (173)
T 1v3w_A 12 RIHPSAFVDENAVVI----GDVVLEEKTSVWPSAVLRGDIEQIYVGKYSNVQDNVSIHTSHGYPTEIGEYVTIGHNAMVH 87 (173)
T ss_dssp EECTTCEECTTSEEE----EEEEECTTCEECTTCEEEEEEEEEEECTTCEECTTCEEECBTTBCEEECSSCEECTTCEEE
T ss_pred EECCCCEECCCCEEe----CCEEECCCCEECCCeEEecCCceEEECCCCEECCCcEEEecCCCCeEECCCCEECCCCEEC
Confidence 344444455555442 367788888887 576653 8999999999999998 58888884444433331
Q ss_pred hhhhCCCcceEeCCCCEEe-eeEECCCeEEcCCc
Q 014953 371 SLLAEGRVPVGIGENTKIK-YEQLKPICHIVETK 403 (415)
Q Consensus 371 ~~~~~~~~~~~Ig~~~~i~-~~~i~~~~~i~~~~ 403 (415)
+ +.||++|.|. +++|.++++|++++
T Consensus 88 -----~---~~Ig~~~~Ig~~~~i~~~~~Ig~~~ 113 (173)
T 1v3w_A 88 -----G---AKVGNYVIIGISSVILDGAKIGDHV 113 (173)
T ss_dssp -----S---CEECSSEEECTTCEECTTCEECSSE
T ss_pred -----C---CEECCCCEECCCCEEeCCCEECCCC
Confidence 1 3444444444 44444444444444
No 103
>3srt_A Maltose O-acetyltransferase; structural genomics, the center structural genomics of infectious diseases, csgid; 2.50A {Clostridium difficile} PDB: 4ebh_A*
Probab=98.86 E-value=6.9e-09 Score=89.69 Aligned_cols=89 Identities=12% Similarity=0.037 Sum_probs=64.2
Q ss_pred cCccCCCeeecCCccccceECCCCEEc-ceEEee---eEEccCcEECCCcEEe-------------------ecEEeCCc
Q 014953 305 SRRNLPPSKIDDSKIVDSIISHGSFIT-SSFIEH---SVVGIRSRINANVHLK-------------------DTMMLGAD 361 (415)
Q Consensus 305 ~~~i~~~~~i~~~~i~~~~ig~~~~I~-~~~i~~---svig~~~~ig~~~~i~-------------------~sii~~~~ 361 (415)
.+.+.++.++.-. .++.||+++.|+ ++.|.+ ..||++|.||+++.|. +++|+++
T Consensus 62 ~~~I~~~~~~~~g--~~~~IG~~~~i~~~~~i~~~~~i~IG~~~~Ig~~v~I~~~~h~~~~~~~~~~~~~~~~v~IG~~- 138 (188)
T 3srt_A 62 QINVEQNIRCDYG--YNIHVGENFFANYDCIFLDVCKIEIGDNVMLAPNVQIYTAYHPIDAQLRNSGIEYGSPVKIGDN- 138 (188)
T ss_dssp CEEECSCEEESSS--TTEEECTTEEECTTEEEECSSCEEECSSCEECTTCEEECEECCSSHHHHHTTEEEECCEEECSS-
T ss_pred CCEEcCCEEEEeC--CCeEECCcccccCceEEecCCceEECCeeEECCCcEEeeCCccCchhhccccceECCCcEECCC-
Confidence 4445555555100 366777777777 566643 3899999999999993 3445555
Q ss_pred cccchhHHHhhhhCCCcceEeCCCCEEe-eeEECCCeEEcCCcccCcccccccc
Q 014953 362 FYETDAEVASLLAEGRVPVGIGENTKIK-YEQLKPICHIVETKYDSSTISRFSL 414 (415)
Q Consensus 362 ~~~~~~~~~~~~~~~~~~~~Ig~~~~i~-~~~i~~~~~i~~~~~~~~~~~~~~~ 414 (415)
|.||.||.|. ++.||+++.|++++.+.+.+-.++.
T Consensus 139 ------------------v~IG~~~~I~~gv~IG~~~vIgagsvV~~dvp~~~v 174 (188)
T 3srt_A 139 ------------------VWIGGGVIITPGITIGDNVVIGAGSVVTKDIPPNTV 174 (188)
T ss_dssp ------------------CEECTTCEECTTCEECSSEEECTTCEECSCBCSSEE
T ss_pred ------------------cEEcCCCEECCCcEECCCCEECCCCEECcccCCCCE
Confidence 8899999987 8999999999999988887766653
No 104
>3q1x_A Serine acetyltransferase; cysteine biosynthesis, LEFT handed helix, OASS; 1.59A {Entamoeba histolytica} PDB: 3p47_A 3p1b_A
Probab=98.86 E-value=3.2e-09 Score=98.30 Aligned_cols=74 Identities=14% Similarity=0.137 Sum_probs=51.3
Q ss_pred eEEccCcEECCCcEEee-cEEeCCccccchhHHHhhhhCCCcceEeCCCCEEe-eeEECCCeEEcCCcccCcccccccc
Q 014953 338 SVVGIRSRINANVHLKD-TMMLGADFYETDAEVASLLAEGRVPVGIGENTKIK-YEQLKPICHIVETKYDSSTISRFSL 414 (415)
Q Consensus 338 svig~~~~ig~~~~i~~-sii~~~~~~~~~~~~~~~~~~~~~~~~Ig~~~~i~-~~~i~~~~~i~~~~~~~~~~~~~~~ 414 (415)
++||++|.|++++.|.+ +.+++++.+..++.....|+++ |.||.||.|. +++||+++.|++++.+.+.+..++.
T Consensus 190 ~~IG~~v~I~~~vtIG~~~~ig~~~~i~~~~~~~~~IGd~---v~IGaga~Ilggv~IG~~a~IGagsvV~~dVp~gs~ 265 (313)
T 3q1x_A 190 AIIGEWCRIYQSVTLGAMHFQEEGGVIKRGTKRHPTVGDY---VTIGTGAKVLGNIIVGSHVRIGANCWIDRDVDSNQT 265 (313)
T ss_dssp CEECSSCEECTTCEEECCCCCCTTCCCCCCSSCSCEECSS---CEECTTCEEESSCEECSSEEECTTCEECSCBCSSEE
T ss_pred cEECCCCEECCCcEEeCCcEECCCceEcCCCccCCEECCC---CEECCCCEECCCcEECCCCEECCCCEECCCcCCCCE
Confidence 45555555555555543 4444555555544444466666 9999999997 8999999999999999888877764
No 105
>3nz2_A Hexapeptide-repeat containing-acetyltransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: ACO; 2.35A {Vibrio cholerae o1 biovar eltor} SCOP: b.81.1.0 PDB: 3ect_A*
Probab=98.86 E-value=8.2e-09 Score=89.73 Aligned_cols=91 Identities=13% Similarity=0.120 Sum_probs=59.3
Q ss_pred cceECCCCEEc-ceEEe---eeEEccCcEECCCcEEeecEE-eCCccccchhHHH--hhhhCCCcceEeCCCCEEe-eeE
Q 014953 321 DSIISHGSFIT-SSFIE---HSVVGIRSRINANVHLKDTMM-LGADFYETDAEVA--SLLAEGRVPVGIGENTKIK-YEQ 392 (415)
Q Consensus 321 ~~~ig~~~~I~-~~~i~---~svig~~~~ig~~~~i~~sii-~~~~~~~~~~~~~--~~~~~~~~~~~Ig~~~~i~-~~~ 392 (415)
++.||++|.|+ ++.|. ..+||++|.||+++.|..+.- .+......+..+. ..|+++ |.||.||.|. ++.
T Consensus 76 ~v~IG~~~~I~~~~~i~~~~~i~IG~~~~Ig~~~~I~~~~~~~~~~~~~~~~~~~~~v~IG~~---v~IG~~~~I~~gv~ 152 (195)
T 3nz2_A 76 TIRIGDHTFINMNVVMLDGAPITIGDHVLIGPSTQFYTASHSLDYRRRQAWETICKPIVIEDD---VWIGGNVVINQGVT 152 (195)
T ss_dssp TEEECTTCEECTTEEEECSSCEEECTTCEECTTCEEECEECCSSGGGTTTCCCEECCEEECTT---CEECTTCEECTTCE
T ss_pred CeEECCCcEECcCCEEecCceEEECCCCEECCCCEEecCCCCcccccccccceecCCeEECCC---CEEcCCCEECCCCE
Confidence 56677777776 56663 348999999999998876421 1110011111110 133333 8888888887 899
Q ss_pred ECCCeEEcCCcccCcccccccc
Q 014953 393 LKPICHIVETKYDSSTISRFSL 414 (415)
Q Consensus 393 i~~~~~i~~~~~~~~~~~~~~~ 414 (415)
||+++.|++++.+.+.+-.++.
T Consensus 153 IG~~~vIgagsvV~~dvp~~~v 174 (195)
T 3nz2_A 153 IGARSVVAANSVVNQDVPPDTL 174 (195)
T ss_dssp ECTTCEECTTCEECSCBCSSEE
T ss_pred ECCCCEECCCCEEccccCCCcE
Confidence 9999999999988888776654
No 106
>3mqg_A Lipopolysaccharides biosynthesis acetyltransferas; beta helix, acetyl transferase, transferase; HET: ACO U5P UDP PE4; 1.43A {Bordetella petrii} PDB: 3mqh_A*
Probab=98.85 E-value=4.8e-09 Score=91.03 Aligned_cols=24 Identities=4% Similarity=-0.147 Sum_probs=11.6
Q ss_pred eEeCCCCEEe-eeEECCCeEEcCCc
Q 014953 380 VGIGENTKIK-YEQLKPICHIVETK 403 (415)
Q Consensus 380 ~~Ig~~~~i~-~~~i~~~~~i~~~~ 403 (415)
+.||++|.|. +|+|.++++|++++
T Consensus 103 ~~Ig~~v~IG~~~~I~~g~~Ig~~~ 127 (192)
T 3mqg_A 103 TIVRQGATLGANCTVVCGATIGRYA 127 (192)
T ss_dssp EEECTTCEECTTCEECTTCEECTTC
T ss_pred cEECCCcEECCCCEECCCCEECCCC
Confidence 3444444444 44444444444444
No 107
>3c8v_A Putative acetyltransferase; YP_390128.1, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; 2.28A {Desulfovibrio desulfuricans subsp}
Probab=98.85 E-value=5e-09 Score=103.03 Aligned_cols=81 Identities=11% Similarity=0.163 Sum_probs=59.0
Q ss_pred CccCCCeee-cCCcc-ccceECCCCEEc-ceEEeeeEEccCcEECCCcEEeecEEeCCccccchhHHHhhhhCCCcceEe
Q 014953 306 RRNLPPSKI-DDSKI-VDSIISHGSFIT-SSFIEHSVVGIRSRINANVHLKDTMMLGADFYETDAEVASLLAEGRVPVGI 382 (415)
Q Consensus 306 ~~i~~~~~i-~~~~i-~~~~ig~~~~I~-~~~i~~svig~~~~ig~~~~i~~sii~~~~~~~~~~~~~~~~~~~~~~~~I 382 (415)
..+.+++++ +++.+ .++.||++|.|+ ++.|.+++||++|.|+++|.|.+|+|+++ |.|
T Consensus 274 ~~I~~~a~I~p~a~i~g~v~IG~~~~I~~~a~I~~v~IG~~~~I~~~~~I~~~vIG~~-------------------~~I 334 (496)
T 3c8v_A 274 AGSASGASVSGYAVIKGDTVIGENVLVSQRAYLDNAWMGKGSNAQENCYIINSRLERN-------------------CVT 334 (496)
T ss_dssp --CCTTCEECTTSEEESSCEECTTCEECTTCEEEEEEECTTCEECTTCEEEEEEEEES-------------------CEE
T ss_pred cccCCCcEECCCcEEeCCeEECCCCEECCCcEEeceEecCCCEECCCceEeceEeCCC-------------------CEE
Confidence 445566666 55555 378999999998 68889999999999999999999999999 455
Q ss_pred CCCCEEeeeEECCCeEEcCCccc
Q 014953 383 GENTKIKYEQLKPICHIVETKYD 405 (415)
Q Consensus 383 g~~~~i~~~~i~~~~~i~~~~~~ 405 (415)
|.+|.|.+|+||++|.||+++.+
T Consensus 335 g~~a~I~gv~IGd~v~IG~~a~I 357 (496)
T 3c8v_A 335 AHGGKIINAHLGDMIFTGFNSFL 357 (496)
T ss_dssp CTTCEEESEEEEETCEECTTCEE
T ss_pred CCCcEEcCceECCCcEECCCCEE
Confidence 55555555555555555555443
No 108
>3vbi_A ANTD, galactoside O-acetyltransferase; anthrose, acylated sugar, LEFT-handed beta helix, sugar N-AC transferase; HET: COA 0FX; 1.80A {Bacillus cereus} PDB: 3vbj_A* 3vbm_A* 3vbk_A* 3vbp_A* 3vbl_A* 3vbn_A*
Probab=98.85 E-value=4.7e-09 Score=92.16 Aligned_cols=96 Identities=13% Similarity=0.004 Sum_probs=66.3
Q ss_pred ccCCCCCccc--cCccCCCeee-cCCccc-cceECCCCEEc-ceEE----eeeEEccCcEECCCcEE-------------
Q 014953 295 FYDATKPIYT--SRRNLPPSKI-DDSKIV-DSIISHGSFIT-SSFI----EHSVVGIRSRINANVHL------------- 352 (415)
Q Consensus 295 ~~~~~~~~~~--~~~i~~~~~i-~~~~i~-~~~ig~~~~I~-~~~i----~~svig~~~~ig~~~~i------------- 352 (415)
.+.+...+.. ...++.++.| +++.|. ++.||++|.|+ ++.| .+++||++|.|++++.|
T Consensus 40 ~I~~~~~i~~~~~v~IG~~~~I~~~~~I~~~v~IG~~~~I~~~~~I~~~~~~~~IG~~~~Ig~~~~I~~~~~~~~~~~~~ 119 (205)
T 3vbi_A 40 LISKKASIYNPGVISIGNNVRIDDFCILSGKVTIGSYSHIAAYTALYGGEVGIEMYDFANISSRTIVYAAIDDFSGNALM 119 (205)
T ss_dssp EEBTTSEEESGGGEEECSSEEECTTCEEEEEEEECSSEEECTTCEEEEEEEEEEECTTCEECTTCEEESEECCCSSSSCC
T ss_pred EECCCeEEccCCeeEECCCCEECCCCEEccceEECCCCEECCCeEEEcCCccEEECCCCEECCCcEEEeCCCCccccccc
Confidence 3445555544 5667777777 667775 78899999999 6888 34999999999999999
Q ss_pred -------------eecEEeCCccccchhHHHhhhhCCCcceEeCCCCEEe-eeEECCCeEEcCCc
Q 014953 353 -------------KDTMMLGADFYETDAEVASLLAEGRVPVGIGENTKIK-YEQLKPICHIVETK 403 (415)
Q Consensus 353 -------------~~sii~~~~~~~~~~~~~~~~~~~~~~~~Ig~~~~i~-~~~i~~~~~i~~~~ 403 (415)
.+++|++++.|+.+ |.|.+++.|. +|+|+.++.|..+.
T Consensus 120 ~~~~~~~~~~~~~~~v~IG~~v~IG~~-------------~~I~~gv~Ig~~~~Ig~gsvV~~~v 171 (205)
T 3vbi_A 120 GPTIPNQYKNVKTGKVILKKHVIIGAH-------------SIIFPNVVIGEGVAVGAMSMVKESL 171 (205)
T ss_dssp STTSCGGGCCCEECCEEECTTCEECTT-------------CEECSSCEECTTCEECTTCEECSCB
T ss_pred CcccccccceeccCCEEECCCCEECCC-------------CEEcCCCEECCCCEEcCCCEECCcc
Confidence 44667777666655 5555555554 55555555555443
No 109
>4e79_A UDP-3-O-acylglucosamine N-acyltransferase; lipopolysaccaride synthesis; 2.66A {Acinetobacter baumannii} PDB: 4e75_A
Probab=98.85 E-value=3.6e-09 Score=100.80 Aligned_cols=15 Identities=27% Similarity=0.512 Sum_probs=6.6
Q ss_pred eEEccCcEECCCcEE
Q 014953 338 SVVGIRSRINANVHL 352 (415)
Q Consensus 338 svig~~~~ig~~~~i 352 (415)
++||++|.||+++.|
T Consensus 206 v~IGd~v~IG~~~~I 220 (357)
T 4e79_A 206 VLIGNDVRIGSNCSI 220 (357)
T ss_dssp EEECTTCEECTTCEE
T ss_pred EEEcCCcEEccccEE
Confidence 344444444444444
No 110
>3hjj_A Maltose O-acetyltransferase; LEFT-handed beta-helix, acyltransferase, struct genomics; 2.15A {Bacillus anthracis} SCOP: b.81.1.0 PDB: 3igj_A*
Probab=98.84 E-value=9.3e-09 Score=89.03 Aligned_cols=104 Identities=11% Similarity=0.054 Sum_probs=64.9
Q ss_pred cCccCCCeee-cCCccccceECCCCEEc-ceEEe---eeEEccCcEECCCcEEeecEEeCCc-cccchhHHH--hhhhCC
Q 014953 305 SRRNLPPSKI-DDSKIVDSIISHGSFIT-SSFIE---HSVVGIRSRINANVHLKDTMMLGAD-FYETDAEVA--SLLAEG 376 (415)
Q Consensus 305 ~~~i~~~~~i-~~~~i~~~~ig~~~~I~-~~~i~---~svig~~~~ig~~~~i~~sii~~~~-~~~~~~~~~--~~~~~~ 376 (415)
++.+.+++++ -+ .++.||++|.|+ ++.|. ...||++|.||+++.|..+....+. ....+.... ..|+++
T Consensus 64 ~~~I~~~~~~~~g---~~v~IG~~~~I~~~~~i~~~~~v~IG~~~~Ig~~~~I~~~~~~~~~~~~~~~~~~~~~v~IG~~ 140 (190)
T 3hjj_A 64 KAQINPDFRCDYG---YNIHVGKSFFANFNCVILDVCEVRIGDHCMFAPGVHIYTATHPLHPVERNSGKEYGKPVKIGNN 140 (190)
T ss_dssp CCEECSSCEESSS---TTEEECTTCEECTTCEEECSSCEEECTTCEECTTCEEECEECCSSHHHHTSSEEEECCEEECTT
T ss_pred CcEECCCEEEEeC---CceEECCceeeCCCeEEEeCCCeEECCceEEcCCcEEecCCccCchhhccccccccCCeEECCC
Confidence 3445555544 11 256666666666 45553 5689999999999999653211110 000000000 123333
Q ss_pred CcceEeCCCCEEe-eeEECCCeEEcCCcccCcccccccc
Q 014953 377 RVPVGIGENTKIK-YEQLKPICHIVETKYDSSTISRFSL 414 (415)
Q Consensus 377 ~~~~~Ig~~~~i~-~~~i~~~~~i~~~~~~~~~~~~~~~ 414 (415)
|.||.+|.|. ++.||+++.|++++.+.+.+..++.
T Consensus 141 ---v~IG~~~~I~~gv~IG~~~vIgagsvV~~dvp~~~v 176 (190)
T 3hjj_A 141 ---VWVGGGAIINPGVSIGDNAVIASGAVVTKDVPNNVV 176 (190)
T ss_dssp ---CEECTTCEECTTCEECTTCEECTTCEECSCBCTTEE
T ss_pred ---CEECCCCEECCCCEECCCCEECCCCEECcccCCCCE
Confidence 8899999998 9999999999999998888877654
No 111
>3kwd_A Carbon dioxide concentrating mechanism protein; LEFT-handed beta helix, gamma carbonic anhydrase, disulfide dependent activity; 1.10A {Thermosynechococcus elongatus} PDB: 3kwe_A 3kwc_A
Probab=98.84 E-value=1.1e-08 Score=90.20 Aligned_cols=48 Identities=13% Similarity=0.034 Sum_probs=31.6
Q ss_pred ceECCCCEEc-ceEEee-eEEccCcEECCCcEEeecEEeCCccccchhHH
Q 014953 322 SIISHGSFIT-SSFIEH-SVVGIRSRINANVHLKDTMMLGADFYETDAEV 369 (415)
Q Consensus 322 ~~ig~~~~I~-~~~i~~-svig~~~~ig~~~~i~~sii~~~~~~~~~~~~ 369 (415)
+.||++|.|+ ++.|.. ++||++|.||+++.|.+++|+++++|+.++.+
T Consensus 112 ~~IG~~v~Ig~~~~I~~~v~Ig~~v~IG~~a~I~~~~Ig~~~~Igags~V 161 (213)
T 3kwd_A 112 VWIGDNVSITHMALIHGPAYIGDGCFIGFRSTVFNARVGAGCVVMMHVLI 161 (213)
T ss_dssp EEECTTCEECTTCEEEEEEEECTTCEECTTCEEEEEEECTTCEECSSCEE
T ss_pred eEECCCcEECCCcEEcCCCEECCCCEECCCCEEeCcEECCCCEEcCCCEE
Confidence 5667777776 466654 77777777777777777667776666665433
No 112
>3r1w_A Carbonic anhydrase; beta-helix, lyase; 1.73A {Unidentified}
Probab=98.84 E-value=1.5e-08 Score=87.58 Aligned_cols=82 Identities=16% Similarity=0.061 Sum_probs=53.9
Q ss_pred CCccccCccCCCeeecCCccccceECCCCEEc-ceEEe----eeEEccCcEECCCcEEeec------------EEeCCcc
Q 014953 300 KPIYTSRRNLPPSKIDDSKIVDSIISHGSFIT-SSFIE----HSVVGIRSRINANVHLKDT------------MMLGADF 362 (415)
Q Consensus 300 ~~~~~~~~i~~~~~i~~~~i~~~~ig~~~~I~-~~~i~----~svig~~~~ig~~~~i~~s------------ii~~~~~ 362 (415)
..+..++.+.+++.+. .++.||++|.|+ ++.|. ++.||++|.|++++.|..+ +|+++
T Consensus 20 ~~ig~~~~I~~~~~i~----~~v~IG~~~~I~~~~~i~~~~~~i~IG~~~~I~~~~~I~~~~~~~~~~~~~~~~Ig~~-- 93 (189)
T 3r1w_A 20 PKLGERVFVDRSSVII----GDVELGDDCSVWPLAVIRGDMHHIRIGARTSVQDGSVLHITHASDYNPGGYPLIIGDD-- 93 (189)
T ss_dssp CEECTTCEECTTCEEE----EEEEECTTCEECTTCEEEEEEEEEEECTTCEECTTCEEECBCCSSSSTTCBCEEECSS--
T ss_pred CEECCCcEECCCCEEe----eeeEECCCCEECCCCEEecCCCceEECCCCEECCCCEEecCCcccCCCCCCCeEECCC--
Confidence 3444555555555552 367777777777 56663 4599999999999999876 88888
Q ss_pred ccchhHHHhhhhCCCcceEeCCCCEEeeeEECCCeEEcCCcc
Q 014953 363 YETDAEVASLLAEGRVPVGIGENTKIKYEQLKPICHIVETKY 404 (415)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~~Ig~~~~i~~~~i~~~~~i~~~~~ 404 (415)
|.||++|.|.+++||+++.|++++.
T Consensus 94 -----------------~~Ig~~~~i~~~~Ig~~~~Ig~~~~ 118 (189)
T 3r1w_A 94 -----------------VTIGHQAMLHGCTIGNRVLIGMKSM 118 (189)
T ss_dssp -----------------EEECTTCEEESCEECSSEEECTTCE
T ss_pred -----------------CEECCCCEEeCcEECCCcEECCCCE
Confidence 5555555555555555555555544
No 113
>3ftt_A Putative acetyltransferase sacol2570; galactoside O-acetyltransferase, enzyme, structural genomics, acyltransferase; 1.60A {Staphylococcus aureus subsp} PDB: 3v4e_A* 4dcl_A 4egg_A
Probab=98.84 E-value=8.1e-09 Score=90.09 Aligned_cols=104 Identities=11% Similarity=0.048 Sum_probs=63.2
Q ss_pred cCccCCCeeec-CCccccceECCCCEEc-ceEEe---eeEEccCcEECCCcEEeecEEeCC-ccccchhHH--HhhhhCC
Q 014953 305 SRRNLPPSKID-DSKIVDSIISHGSFIT-SSFIE---HSVVGIRSRINANVHLKDTMMLGA-DFYETDAEV--ASLLAEG 376 (415)
Q Consensus 305 ~~~i~~~~~i~-~~~i~~~~ig~~~~I~-~~~i~---~svig~~~~ig~~~~i~~sii~~~-~~~~~~~~~--~~~~~~~ 376 (415)
++.+.++.++. + .++.||++|.|+ ++.|. ..+||++|.||++|.|..+.-... .....+... ...|+++
T Consensus 60 ~~~i~~~~~~~~g---~~~~IG~~~~I~~~~~i~~~~~v~IG~~v~Ig~~~~I~~~~~~~~~~~~~~~~~~~~~v~IG~~ 136 (199)
T 3ftt_A 60 NVSISIPFDTDYG---WNVKLGKNVYVNTNCYFMDGGQITIGDNVFIGPNCGFYTATHPLNFHHRNEGFEKAGPIHIGSN 136 (199)
T ss_dssp SEEECSSEEESSS---TTEEECSSEEECTTEEEECSSCEEECSSEEECTTCEEECEECCSSHHHHHTTEEEECCEEECSS
T ss_pred CeEEeCCEEEEec---CCcEECCCeEECCCeEEecCCEEEECCCCEECCCCEEecCCCcCccccccccceecCCeEEcCC
Confidence 34455555541 1 356667777776 56663 359999999999999954320000 000000000 0012222
Q ss_pred CcceEeCCCCEEe-eeEECCCeEEcCCcccCcccccccc
Q 014953 377 RVPVGIGENTKIK-YEQLKPICHIVETKYDSSTISRFSL 414 (415)
Q Consensus 377 ~~~~~Ig~~~~i~-~~~i~~~~~i~~~~~~~~~~~~~~~ 414 (415)
|.||.||.|. ++.||+++.|++++.+.+.+-.++.
T Consensus 137 ---v~IG~~~~I~~gv~IG~~~vIgagsvV~~dvp~~~v 172 (199)
T 3ftt_A 137 ---TWFGGHVAVLPGVTIGEGSVIGAGSVVTKDIPPHSL 172 (199)
T ss_dssp ---EEECTTCEECTTCEECTTCEECTTCEECSCBCTTEE
T ss_pred ---cEEcCCCEECCCCEECCCCEECCCCEECcccCCCCE
Confidence 8899999887 8999999999999988887766653
No 114
>3fsy_A Tetrahydrodipicolinate N-succinyltransferase; beta helix, L beta H domain, acyltransferase; HET: SCA; 1.97A {Mycobacterium tuberculosis} PDB: 3fsx_A*
Probab=98.82 E-value=5.5e-09 Score=95.07 Aligned_cols=47 Identities=19% Similarity=0.207 Sum_probs=30.4
Q ss_pred eEEccCcEECCCcEEee---------cEEeCCccccchhHHHhhhhCCCcceEeCCCCEEeeeEECCCeEEcCCcc
Q 014953 338 SVVGIRSRINANVHLKD---------TMMLGADFYETDAEVASLLAEGRVPVGIGENTKIKYEQLKPICHIVETKY 404 (415)
Q Consensus 338 svig~~~~ig~~~~i~~---------sii~~~~~~~~~~~~~~~~~~~~~~~~Ig~~~~i~~~~i~~~~~i~~~~~ 404 (415)
+.||++|.|++++.|.+ ..|+++ |.||.||.| ++.||++|+|++|+.
T Consensus 208 v~IGd~v~IgpGa~IgG~~~~~~~~~V~IGDn-------------------v~IGanAtI-gVtIGd~~iIGAGSV 263 (332)
T 3fsy_A 208 VVVGDGSDVGGGASIMGTLSGGGTHVISIGKR-------------------CLLGANSGL-GISLGDDCVVEAGLY 263 (332)
T ss_dssp CEECTTCEECTTCEECSBCC---CCBCEECTT-------------------CEECTTCEE-CSCBCSSCEECTTCE
T ss_pred eEECCCCEECCCCEEcCCCCCCCccceEECCC-------------------CEECCCCEE-eeEECCCCEECCCCE
Confidence 67888888888887765 566666 566666665 555555555555553
No 115
>2iu8_A LPXD, UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; UDP-3- O-acyl-glucosamine N-acyltransferase, lipid A biosynthesis; HET: PLM UD1; 2.2A {Chlamydia trachomatis} PDB: 2iu9_A* 2iua_A*
Probab=98.82 E-value=6.5e-09 Score=99.86 Aligned_cols=35 Identities=14% Similarity=0.079 Sum_probs=21.2
Q ss_pred eEeCCCCEEe-eeEECCCeEEcCCcccCcccccccc
Q 014953 380 VGIGENTKIK-YEQLKPICHIVETKYDSSTISRFSL 414 (415)
Q Consensus 380 ~~Ig~~~~i~-~~~i~~~~~i~~~~~~~~~~~~~~~ 414 (415)
|.||.++.|. ++.||+++.|++++.+.+.+-++++
T Consensus 293 ~~Ig~~~~i~~~v~Ig~~~~I~a~s~V~~~v~~~~~ 328 (374)
T 2iu8_A 293 VIIGGQAGITGHICIADHVIMMAQTGVTKSITSPGI 328 (374)
T ss_dssp CEECTTCEECSSCEECTTEEECTTCEECSCBCSCEE
T ss_pred eEEecCcEECCCcccCCCcEEccCceeecccCCCcE
Confidence 4444444444 5667777777777777766665543
No 116
>2rij_A Putative 2,3,4,5-tetrahydropyridine-2-carboxylate succinyltransferase; structural genomics, joint center for structural genomics; HET: MSE CIT; 1.90A {Campylobacter jejuni}
Probab=98.78 E-value=1.5e-08 Score=95.72 Aligned_cols=22 Identities=18% Similarity=0.262 Sum_probs=17.7
Q ss_pred eCceEEecCC--HHHHHHHHHhhc
Q 014953 266 FNDYWEDIGT--IRSFFEANLALT 287 (415)
Q Consensus 266 ~~g~~~di~t--~~~y~~an~~~l 287 (415)
...+|.+.+. |++|......+.
T Consensus 168 ~~~~Wt~~G~~~~~~f~~~~~~l~ 191 (387)
T 2rij_A 168 SNVAWSDDKPIELEYLRANEMRLK 191 (387)
T ss_dssp CCEEEETTEEECHHHHHHHHHHHH
T ss_pred ceeeeccCcccCHHHHHHHHHHHH
Confidence 4568999998 788888888776
No 117
>4hur_A Virginiamycin A acetyltransferase; structural genomics, antibiotic resistance, center for struc genomics of infectious diseases (csgid); HET: ACO; 2.15A {Staphylococcus aureus} PDB: 4hus_A* 4e8l_A
Probab=98.78 E-value=9.9e-09 Score=91.03 Aligned_cols=35 Identities=17% Similarity=0.200 Sum_probs=30.6
Q ss_pred eEeCCCCEEe-eeEECCCeEEcCCcccCcccccccc
Q 014953 380 VGIGENTKIK-YEQLKPICHIVETKYDSSTISRFSL 414 (415)
Q Consensus 380 ~~Ig~~~~i~-~~~i~~~~~i~~~~~~~~~~~~~~~ 414 (415)
|.||.||.|. ++.||+++.|++++.+.+.+-+++.
T Consensus 126 v~IG~~a~I~~gv~IG~gavIgagsvV~~dVp~~~v 161 (220)
T 4hur_A 126 VWIGRDVTIMPGVKIGDGAIIAAEAVVTKNVAPYSI 161 (220)
T ss_dssp CEECTTCEECTTCEECTTCEECTTCEECSCBCTTEE
T ss_pred cEECCCCEEeCCCEECCCCEEcCCCEEcccCCCCcE
Confidence 8888888887 8999999999999998888877764
No 118
>1krr_A Galactoside O-acetyltransferase; LEFT-handed parallel beta helix; HET: ACO; 2.50A {Escherichia coli} SCOP: b.81.1.3 PDB: 1kqa_A* 1kru_A* 1krv_A*
Probab=98.77 E-value=2.4e-08 Score=86.96 Aligned_cols=105 Identities=15% Similarity=0.076 Sum_probs=65.5
Q ss_pred cCccCCCeeecCCccccceECCCCEEc-ceEEee---eEEccCcEECCCcEEeecEE-eCCccccchhHHH--hhhhCCC
Q 014953 305 SRRNLPPSKIDDSKIVDSIISHGSFIT-SSFIEH---SVVGIRSRINANVHLKDTMM-LGADFYETDAEVA--SLLAEGR 377 (415)
Q Consensus 305 ~~~i~~~~~i~~~~i~~~~ig~~~~I~-~~~i~~---svig~~~~ig~~~~i~~sii-~~~~~~~~~~~~~--~~~~~~~ 377 (415)
++.|.++.++.- -.++.||++|.|+ ++.|.+ ..||++|.||+++.|..+.- .+......+..+. ..|+++
T Consensus 61 ~~~I~~~~~~~~--g~~i~IG~~~~I~~~~~i~~~~~i~IG~~v~Ig~~v~I~~~~h~~~~~~~~~~~~~~~~v~IGd~- 137 (203)
T 1krr_A 61 NAWVEPPVYFSY--GSNIHIGRNFYANFNLTIVDDYTVTIGDNVLIAPNVTLSVTGHPVHHELRKNGEMYSFPITIGNN- 137 (203)
T ss_dssp SCEECSCEEESC--STTEEECSSCEECSCEEEECSSCEEECSSCEECSSCEEESEECCSSTTTCTTCCBEECCEEECTT-
T ss_pred CcEEcCCeEEEe--CCCeEECCeeEECCccEEecccceEECCCCEECCCCEEecCCcccchhhcccCceeCCCcEECCC-
Confidence 445555554310 1367788888887 566653 78999999999998864310 0111011111010 123333
Q ss_pred cceEeCCCCEEe-eeEECCCeEEcCCcccCcccccccc
Q 014953 378 VPVGIGENTKIK-YEQLKPICHIVETKYDSSTISRFSL 414 (415)
Q Consensus 378 ~~~~Ig~~~~i~-~~~i~~~~~i~~~~~~~~~~~~~~~ 414 (415)
|.||.||.|. ++.||+++.|++++.+.+.+-+++.
T Consensus 138 --v~IG~~a~I~~gv~IG~~~vIgagsvV~~dvp~~~v 173 (203)
T 1krr_A 138 --VWIGSHVVINPGVTIGDNSVIGAGSIVTKDIPPNVV 173 (203)
T ss_dssp --CEECTTCEECTTCEECTTCEECTTCEECSCBCTTEE
T ss_pred --eEECCCCEEeCCeEECCCCEECCCCEECCCcCCCcE
Confidence 7888888887 8888889999999888877766654
No 119
>1qre_A Carbonic anhydrase; beta-helix, lyase; 1.46A {Methanosarcina thermophila} SCOP: b.81.1.5 PDB: 1qq0_A 1qrf_A 1qrg_A 1qrm_A 1qrl_A 1thj_A 3otm_A 3ow5_A 3ou9_A 3otz_A 3oup_A
Probab=98.76 E-value=3.2e-08 Score=89.36 Aligned_cols=26 Identities=12% Similarity=0.068 Sum_probs=12.4
Q ss_pred eEeCCCCEEeeeEECCCeEEcCCccc
Q 014953 380 VGIGENTKIKYEQLKPICHIVETKYD 405 (415)
Q Consensus 380 ~~Ig~~~~i~~~~i~~~~~i~~~~~~ 405 (415)
|.||.||.|.++.||+++.|++++.+
T Consensus 165 v~IG~~a~I~~v~Ig~~~~IgagsvV 190 (247)
T 1qre_A 165 TFIGMQAFVFKSKVGNNCVLEPRSAA 190 (247)
T ss_dssp CEECTTCEEEEEEECTTCEECTTCEE
T ss_pred CEECCCCEEeceEECCCCEECCCCEE
Confidence 44444444444444444444444444
No 120
>1hm9_A GLMU, UDP-N-acetylglucosamine-1-phosphate uridyltransfe; acetyltransferase, bifunctional, drug design; HET: ACO UD1; 1.75A {Streptococcus pneumoniae} SCOP: b.81.1.4 c.68.1.5 PDB: 1hm8_A* 1hm0_A* 4ac3_A* 4aaw_A* 1g97_A* 1g95_A*
Probab=98.74 E-value=1.5e-08 Score=100.49 Aligned_cols=100 Identities=17% Similarity=0.187 Sum_probs=68.2
Q ss_pred cCccCCCeee-cCCccc-cceECCCCEEc-ceEEeeeEEccCcEECCCcEEeecEEeCCccccchhHHH--hhhhCCCc-
Q 014953 305 SRRNLPPSKI-DDSKIV-DSIISHGSFIT-SSFIEHSVVGIRSRINANVHLKDTMMLGADFYETDAEVA--SLLAEGRV- 378 (415)
Q Consensus 305 ~~~i~~~~~i-~~~~i~-~~~ig~~~~I~-~~~i~~svig~~~~ig~~~~i~~sii~~~~~~~~~~~~~--~~~~~~~~- 378 (415)
.+.+++++.| +++.|. ++.||++|+|+ ++.|.+|.||++|.|+ ++.|.+++|++++.|++++.+. +.++++..
T Consensus 274 ~~~i~~~~~i~~~~~i~~~~~ig~~~~I~~~~~i~~~~ig~~~~i~-~~~i~~~~Ig~~~~Ig~~~~i~~~~~ig~~~~I 352 (468)
T 1hm9_A 274 DVEIAPEVQIEANVILKGQTKIGAETVLTNGTYVVDSTIGAGAVIT-NSMIEESSVADGVTVGPYAHIRPNSSLGAQVHI 352 (468)
T ss_dssp TCEECTTCEECSSCEEESSCEECTTCEECTTCEEESCEECTTCEEC-SCEEESCEECTTCEECSSCEECSSCEECTTCEE
T ss_pred CcEECCCCEECCCcEECCCCEECCCCEECCCCEEeccEEeCCcEEE-EEEEeccccCCCcEECCceEEecCcEECCccEE
Confidence 3445555555 455553 78899999998 6999999999999999 9999999999998888887664 34455410
Q ss_pred -------ceEeCCCCEEe------eeEECCCeEEcCCccc
Q 014953 379 -------PVGIGENTKIK------YEQLKPICHIVETKYD 405 (415)
Q Consensus 379 -------~~~Ig~~~~i~------~~~i~~~~~i~~~~~~ 405 (415)
++.||+++.+. +++||+++.|++++..
T Consensus 353 g~~~~i~~~~Ig~~~~i~~~~~i~~~~Ig~~~~Ig~~~~i 392 (468)
T 1hm9_A 353 GNFVEVKGSSIGENTKAGHLTYIGNCEVGSNVNFGAGTIT 392 (468)
T ss_dssp EEEEEEESCEECTTCEEEEEEEEESEEECTTCEECTTCEE
T ss_pred CCCcEEeeeEEcCCcEeCCceEEccccccCCcEECCCcEE
Confidence 12233343332 2456666666666543
No 121
>3r3i_A UTP--glucose-1-phosphate uridylyltransferase; rossmann fold, beta barrel, nucleotidyltransferase; 3.57A {Homo sapiens} PDB: 3r2w_A
Probab=98.73 E-value=2e-07 Score=90.99 Aligned_cols=350 Identities=12% Similarity=0.109 Sum_probs=180.1
Q ss_pred ccceEEEEEcCCCCCcccccccCCcccceeeC-Ccceeehhehhhhhcc----CCc-EEEEEcc-cChhHHHHHHHhhcc
Q 014953 6 ARTVAAVILGGGAGTRLYPLTKQRAKPAVPIG-GAYRLIDVPMSNCINS----GIN-KVYILTQ-YNSASLNRHLARAYN 78 (415)
Q Consensus 6 ~~~~~aVILAaG~g~Rl~plt~~~pK~llpv~-g~~pli~~~l~~l~~~----gi~-~I~vv~~-~~~~~i~~~l~~~~~ 78 (415)
..++.+|+||||.||||+ ...||.++|+. |+ ++++++++++.+. |.. .++|-++ ..++...+++.+..-
T Consensus 125 l~kvavvlLaGGlGTRLG---~~~PK~~i~V~sgk-tflql~~eqI~~l~~~~g~~IPl~IMTS~~T~~~T~~~f~k~~~ 200 (528)
T 3r3i_A 125 LNKLVVVKLNGGLGTSMG---CKGPKSLIGVRNEN-TFLDLTVQQIEHLNKTYNTDVPLVLMNSFNTDEDTKKILQKYNH 200 (528)
T ss_dssp CTTEEEEEECCCBCTTTT---CSSBGGGSEEETTE-EHHHHHHHHHHHHHHHHTCCCCEEEEECTTTHHHHHSSCGGGTT
T ss_pred cCceEEEEeCCCCccccC---CCCCccceecCCCC-cHHHHHHHHHHHHHHHhCCCCCEEEEeccchhHHHHHHHHhcCc
Confidence 467899999999999997 78999999997 67 9999999998864 422 3455555 445778888776432
Q ss_pred CCCCcc-cCCceEEEecCccC-CC--------CCCC-ccccchHHHHHHhh--hhhcCCCCCCcCeEEEEcCCeec-ccC
Q 014953 79 YGSGVT-FGDGCVEVLAATQT-PG--------EAGK-RWFQGTADAVRQFH--WLFEDPRNKVIEDVLILSGDHLY-RMD 144 (415)
Q Consensus 79 ~~~~~~-~~~~~v~i~~~~~~-~~--------~~~~-~~~~Gt~~al~~~~--~~i~~~~~~~~~~~lv~~gD~i~-~~~ 144 (415)
++.... |....+..+..... .- .... -.+.|.|+-..... ..+++....+.+.+.+.+.|.+. ..|
T Consensus 201 fg~~V~~F~Q~~~P~i~~dg~l~l~~~~~~~~~~~~~~~P~GhGdiy~aL~~sGlLd~l~~~Gieyi~v~nvDNlga~vD 280 (528)
T 3r3i_A 201 CRVKIYTFNQSRYPRINKESLLPVAKDVSYSGENTEAWYPPGHGDIYASFYNSGLLDTFIGEGKEYIFVSNIDNLGATVD 280 (528)
T ss_dssp SSCCEEEEECCCBCCEETTTCCCC-------------CBCCBTTTHHHHHHHHSHHHHHHHTTCCEEEEEETTBTTCCCC
T ss_pred cCCCeEEEEeCCeeeEecCCceecccccccCCCcceeeCcCCChHHHHHHHHCChHHHHHhcCCEEEEEEccCCcccccC
Confidence 321110 00000000000000 00 0000 12345554332221 12222111246899999999954 344
Q ss_pred hHHHHHHHHHc----CCcEEEEEEEcCCCcCCcccEEEECCCCC--eEEEEEcCCccccccccccccccccccccccccc
Q 014953 145 YMDFVQNHRQS----GADITISCLPMDDSRASDFGLMKINNEGR--VLSFSEKPKGKDLKAMAVDTTVLGLSKQEAEEKP 218 (415)
Q Consensus 145 l~~~l~~h~~~----~~~~ti~~~~~~~~~~~~~g~v~~d~~~~--v~~~~ek~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (415)
..++.++..+ ++++.+-+.+...+ .+.-|+++. .+|+ ++++.+-|+.... ........
T Consensus 281 -p~~Lg~~~~~~~~~~~d~~~kVv~Kt~~-dek~Gvl~~-~dGk~~vvEyseip~e~~~-------------~~~g~~~f 344 (528)
T 3r3i_A 281 -LYILNHLMNPPNGKRCEFVMEVTNKTRA-DVKGGTLTQ-YEGKLRLVEIAQVPKAHVD-------------EFKSVSKF 344 (528)
T ss_dssp -HHHHHHHSSCSSSCCCSEEEEECCCCTT-CCSSCEEEC-SSSSCEEECTTSSCGGGTT-------------TSSCSSSC
T ss_pred -HHHHHHHHhcccccCCcEEEEEeEcccc-CCcccEEEE-ECCeEEEEEecCCChhHhh-------------ccCCcccC
Confidence 3467777666 78888766654432 233466654 3555 3333333322110 00111234
Q ss_pred ceeeeeEEEEeHHHHHHHHhhhCCCC------------------CcccccchhhhcccceEEEEEeC-ceEEecCCHHHH
Q 014953 219 YIASMGVYLFKKEILLNLLRWRFPTA------------------NDFGSEIIPASANEQFLKAYLFN-DYWEDIGTIRSF 279 (415)
Q Consensus 219 ~l~~~Giyi~~~~~l~~~l~~~~~~~------------------~~~~~~~l~~l~~~~~i~~~~~~-g~~~di~t~~~y 279 (415)
.+.++...+|+-++++++++...... +.+..++++.. .+..++.++ ..|..+.+..|+
T Consensus 345 ~~~Ntnnlw~~L~~L~~v~~~~~l~Lp~ivn~K~vd~~~~viqlEt~igd~i~~f---~~~~~i~VpR~rF~PvKn~sdL 421 (528)
T 3r3i_A 345 KIFNTNNLWISLAAVKRLQEQNAIDMEIIVNAKTLDGGLNVIQLETAVGAAIKSF---ENSLGINVPRSRFLPVKTTSDL 421 (528)
T ss_dssp CCCEEEEEEEEHHHHHHHHHTTCCCCCCEEEEECCSSSSCEEEEEBCSTTCSTTS---SSCCCEECCGGGCCBCCSHHHH
T ss_pred CeEEEEEEEEEHHHHHHHHHhCCCCCCceecCcccCCCCCEEEeHHHHHHHHHhc---cCcEEEEEehHHcccccchHHH
Confidence 56889999999999998887531110 00111122111 122334443 238899999999
Q ss_pred HHHHHhhcCCCCCCCccCCCCCc--cccCccCCCeeecCCccc--cceECC-CCEEcceEEeeeEEccCcEECCCcEEee
Q 014953 280 FEANLALTAHPPMFSFYDATKPI--YTSRRNLPPSKIDDSKIV--DSIISH-GSFITSSFIEHSVVGIRSRINANVHLKD 354 (415)
Q Consensus 280 ~~an~~~l~~~~~~~~~~~~~~~--~~~~~i~~~~~i~~~~i~--~~~ig~-~~~I~~~~i~~svig~~~~ig~~~~i~~ 354 (415)
+....++-......-...+.... .+...+++. -..+. ..-+.. -..++ ..+=.|--+|+-|+++++.+
T Consensus 422 ll~~Sdly~l~~g~l~~~~~r~~~~~P~v~L~~~----~~~v~~f~~rf~~iP~l~~---~~~LtV~Gdv~fg~~v~l~G 494 (528)
T 3r3i_A 422 LLVMSNLYSLNAGSLTMSEKREFPTVPLVKLGSS----FTKVQDYLRRFESIPDMLE---LDHLTVSGDVTFGKNVSLKG 494 (528)
T ss_dssp HHHHSTTSEEETTEEECCSSCSSCCCCEEEECTT----SCSHHHHHHHCSSCCEEEE---EEEEEEESEEECCTTCEEEE
T ss_pred HHHhcceeEeeCCeEEecccccCCCCCEEEeCcc----cCcHHHHHHhCCCCCCccc---CCEEEEecceEECCCcEEEE
Confidence 98876653221110011111100 011111111 11111 111211 11121 23445666788899999988
Q ss_pred cEEeCCccccchhHHHhhhhCCCcceEeCCCCEEeeeEECCCeEE
Q 014953 355 TMMLGADFYETDAEVASLLAEGRVPVGIGENTKIKYEQLKPICHI 399 (415)
Q Consensus 355 sii~~~~~~~~~~~~~~~~~~~~~~~~Ig~~~~i~~~~i~~~~~i 399 (415)
.++.... +| .+..|-+|++++|.+|..+..|
T Consensus 495 ~v~i~~~-------------~g-~~~~ip~g~~len~~v~g~~~~ 525 (528)
T 3r3i_A 495 TVIIIAN-------------HG-DRIDIPPGAVLENKIVSGNLRI 525 (528)
T ss_dssp EEEEECC-------------TT-CEEECCTTCEEEEEEEC-----
T ss_pred EEEEEcC-------------CC-CceecCCCCEEeccEEeccccc
Confidence 7776331 01 1267999999999888876655
No 122
>2p2o_A Maltose transacetylase; GK1921, GKA001001921.1, geobacillus kaustophilus structural genomics, PSI; 1.74A {Geobacillus kaustophilus} PDB: 2ic7_A
Probab=98.72 E-value=3.4e-08 Score=84.94 Aligned_cols=75 Identities=15% Similarity=0.148 Sum_probs=56.6
Q ss_pred cceECCCCEEc-ceEE---eeeEEccCcEECCCcEEee-------------------cEEeCCccccchhHHHhhhhCCC
Q 014953 321 DSIISHGSFIT-SSFI---EHSVVGIRSRINANVHLKD-------------------TMMLGADFYETDAEVASLLAEGR 377 (415)
Q Consensus 321 ~~~ig~~~~I~-~~~i---~~svig~~~~ig~~~~i~~-------------------sii~~~~~~~~~~~~~~~~~~~~ 377 (415)
++.||++|.|. ++.| .+..||++|.||+++.|.. +.|+++
T Consensus 74 ~v~IG~~~~i~~~~~i~~~~~i~IG~~v~Ig~~v~I~~~~h~~~~~~~~~~~~~~~~v~IGd~----------------- 136 (185)
T 2p2o_A 74 NIHVGENFFMNFDGVILDVCEVRIGDHCFIGPGVHIYTATHPLDPHERNSGLEYGKPVVIGHN----------------- 136 (185)
T ss_dssp TEEECTTEEECSSEEEECSSCEEECTTCEECTTCEEECEECCSSHHHHHTCCBEECCEEECSS-----------------
T ss_pred CEEECCeeEEcCCeEEEeccceEECCCcEEeCCCEEEcCCCcCChhhcccCccccCCeEEcCC-----------------
Confidence 56677777776 5665 3678999999999998853 344444
Q ss_pred cceEeCCCCEEe-eeEECCCeEEcCCcccCcccccccc
Q 014953 378 VPVGIGENTKIK-YEQLKPICHIVETKYDSSTISRFSL 414 (415)
Q Consensus 378 ~~~~Ig~~~~i~-~~~i~~~~~i~~~~~~~~~~~~~~~ 414 (415)
|.||.||.|. ++.||+++.|++++.+.+.|..++.
T Consensus 137 --v~IG~~~~I~~gv~IG~~~vIgagsvV~~~vp~~~v 172 (185)
T 2p2o_A 137 --VWIGGRAVINPGVTIGDNAVIASGAVVTKDVPANAV 172 (185)
T ss_dssp --CEECTTCEECTTCEECTTCEECTTCEECSCBCTTEE
T ss_pred --eEECCCCEECCCCEECCCCEECCCCEECCCCCCCcE
Confidence 8888888887 8888899999998888777766653
No 123
>4fce_A Bifunctional protein GLMU; GLMU. csgid, niaid, structural genomics, national institute allergy and infectious diseases; HET: GP1; 1.96A {Yersinia pseudotuberculosis} PDB: 3fww_A 1hv9_A* 2oi5_A* 2oi6_A* 2oi7_A* 1fxj_A* 1fwy_A*
Probab=98.72 E-value=1.1e-08 Score=101.25 Aligned_cols=81 Identities=22% Similarity=0.201 Sum_probs=60.4
Q ss_pred CccCCCeee-cCCcc-ccceECCCCEEc-ceEEeeeEEccCcEECCCcEEeecEEeCCccccchhHHH--hhhhCCCcce
Q 014953 306 RRNLPPSKI-DDSKI-VDSIISHGSFIT-SSFIEHSVVGIRSRINANVHLKDTMMLGADFYETDAEVA--SLLAEGRVPV 380 (415)
Q Consensus 306 ~~i~~~~~i-~~~~i-~~~~ig~~~~I~-~~~i~~svig~~~~ig~~~~i~~sii~~~~~~~~~~~~~--~~~~~~~~~~ 380 (415)
+.+++++.| +++.| .++.||++|.|+ ++.|.+++||++|.|++++.|.+++|++++.|++++.+. +.++++ +
T Consensus 269 ~~ig~~~~i~~~~~i~~~~~ig~~~~I~~~~~i~~~~Ig~~~~I~~~~~i~~~~Ig~~~~ig~~~~i~~~~~ig~~---~ 345 (459)
T 4fce_A 269 LTHGRDITIDTNVIIEGHVILGDRVRIGTGCVLKNCVIGDDSEISPYTVLEDARLDANCTVGPFARLRPGAELAEG---A 345 (459)
T ss_dssp EEECSSCEECTTEEEEEEEEECTTCEECTTCEEESCEECTTCEECSSCEEESCEECTTCEECSSEEECTTCEECTT---C
T ss_pred EEECCCcEECCCeeeccceEECCCCEECCCCEEeccEECCCCEECCCcEEeCCEECCCCEECCccEECCCcEECCC---c
Confidence 445566666 55666 478899999998 788889999999999999999999999998888887664 344555 4
Q ss_pred EeCCCCEEe
Q 014953 381 GIGENTKIK 389 (415)
Q Consensus 381 ~Ig~~~~i~ 389 (415)
.||++|.|.
T Consensus 346 ~Ig~~~~i~ 354 (459)
T 4fce_A 346 HVGNFVEIK 354 (459)
T ss_dssp EEEEEEEEE
T ss_pred EECCCeEEe
Confidence 555544443
No 124
>3f1x_A Serine acetyltransferase; NESG X-RAY BVR62 A6KZB9 A6KZB9_BACV8, structural genomics, P protein structure initiative; 2.00A {Bacteroides vulgatus atcc 8482}
Probab=98.72 E-value=2e-08 Score=92.67 Aligned_cols=35 Identities=11% Similarity=-0.034 Sum_probs=31.2
Q ss_pred eEeCCCCEEe-eeEECCCeEEcCCcccCcccccccc
Q 014953 380 VGIGENTKIK-YEQLKPICHIVETKYDSSTISRFSL 414 (415)
Q Consensus 380 ~~Ig~~~~i~-~~~i~~~~~i~~~~~~~~~~~~~~~ 414 (415)
|.||+||.|. +++||+++.|++++.+.+.+-+++.
T Consensus 258 V~IGaga~Il~gv~IGd~a~IGagsvV~~dVp~~sv 293 (310)
T 3f1x_A 258 VIVYSNATILGRVTIGKGATVGGNIWVTENVPAGSR 293 (310)
T ss_dssp CEECTTCEEESSCEECTTCEECSSCEECSCBCTTCE
T ss_pred cEEcCCCEECCCcEECCCCEECCCCEECCccCCCcE
Confidence 8999999998 9999999999999998888877764
No 125
>3mc4_A WW/RSP5/WWP domain:bacterial transferase hexapept repeat:serine O-acetyltransferase...; ssgcid, structural genomics; 1.95A {Brucella melitensis biovar abortus}
Probab=98.71 E-value=2.5e-08 Score=90.85 Aligned_cols=35 Identities=20% Similarity=0.114 Sum_probs=27.8
Q ss_pred eEeCCCCEEe-eeEECCCeEEcCCcccCcccccccc
Q 014953 380 VGIGENTKIK-YEQLKPICHIVETKYDSSTISRFSL 414 (415)
Q Consensus 380 ~~Ig~~~~i~-~~~i~~~~~i~~~~~~~~~~~~~~~ 414 (415)
|.||.||.|. +++||++++|++++.+.+.+-.++.
T Consensus 223 v~IGaga~Il~gv~IG~~a~IGagsvV~kdVp~~sv 258 (287)
T 3mc4_A 223 VLIGAGAKILGNIQVGQCSKIAAGSVVLKSVPHNVT 258 (287)
T ss_dssp CEECTTCEEESSCEECTTCEECTTCEECSCBCTTEE
T ss_pred CEECCCCEECCCcEECCCCEECCCCEEccccCCCCE
Confidence 7888888887 7888888888888887777766553
No 126
>1ocx_A Maltose O-acetyltransferase; LEFT-handed parallel beta-helix; 2.15A {Escherichia coli} SCOP: b.81.1.3
Probab=98.69 E-value=3.9e-08 Score=84.34 Aligned_cols=75 Identities=11% Similarity=0.113 Sum_probs=56.7
Q ss_pred cceECCCCEEc-ceEEe---eeEEccCcEECCCcEEee-------------------cEEeCCccccchhHHHhhhhCCC
Q 014953 321 DSIISHGSFIT-SSFIE---HSVVGIRSRINANVHLKD-------------------TMMLGADFYETDAEVASLLAEGR 377 (415)
Q Consensus 321 ~~~ig~~~~I~-~~~i~---~svig~~~~ig~~~~i~~-------------------sii~~~~~~~~~~~~~~~~~~~~ 377 (415)
++.||++|.|+ ++.|. ...||++|.|++++.|.. +.|+++
T Consensus 72 ~v~IG~~~~I~~~~~i~~~~~i~IG~~v~Ig~~v~I~~~~h~~~~~~~~~~~~~~~~v~IG~~----------------- 134 (182)
T 1ocx_A 72 NIFLGNNFFANFDCVMLDVCPIRIGDNCMLAPGVHIYTATHPIDPVARNSGAELGKPVTIGNN----------------- 134 (182)
T ss_dssp TEEECSSEEECSSEEEECSSCEEECTTCEECTTCEEECEECCSSHHHHTTTCBEECCEEECTT-----------------
T ss_pred CEEECCCcEEeCCeEEEeccceEEcCCcEEeCCcEEEeCCCccChhhcccCccccCCeEEeCC-----------------
Confidence 56667777776 56553 578999999999999852 344444
Q ss_pred cceEeCCCCEEe-eeEECCCeEEcCCcccCcccccccc
Q 014953 378 VPVGIGENTKIK-YEQLKPICHIVETKYDSSTISRFSL 414 (415)
Q Consensus 378 ~~~~Ig~~~~i~-~~~i~~~~~i~~~~~~~~~~~~~~~ 414 (415)
|.||.||.|. ++.||+++.|++++.+.+.|-.++.
T Consensus 135 --v~Ig~~a~I~~gv~IG~~~vIgagsvV~~dip~~~v 170 (182)
T 1ocx_A 135 --VWIGGRAVINPGVTIGDNVVVASGAVVTKDVPDNVV 170 (182)
T ss_dssp --CEECTTCEECTTCEECTTCEECTTCEECSCBCSSEE
T ss_pred --eEECCCCEECCCcEECCCCEECCCCEECCcCCCCcE
Confidence 8888888887 8889999999999888877776654
No 127
>2pig_A Putative transferase; SCR6, NESG, YDCK, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.38A {Salmonella paratyphi} PDB: 2f9c_A
Probab=98.69 E-value=2.1e-08 Score=93.99 Aligned_cols=107 Identities=13% Similarity=0.091 Sum_probs=63.0
Q ss_pred cCCCCCccccCccCCCeee-cCCccccceECCCCEEc-ceEEeeeEEccCcEECCCcE----------------------
Q 014953 296 YDATKPIYTSRRNLPPSKI-DDSKIVDSIISHGSFIT-SSFIEHSVVGIRSRINANVH---------------------- 351 (415)
Q Consensus 296 ~~~~~~~~~~~~i~~~~~i-~~~~i~~~~ig~~~~I~-~~~i~~svig~~~~ig~~~~---------------------- 351 (415)
+.+...+...+.|++++.| +++.|.+|+||++++|+ ++.|++|+|+++|.|+.+++
T Consensus 74 I~~~~~I~g~~~Ig~~~~Ig~~~~I~~~~Ig~~~~I~~~s~I~~s~I~~~~~I~~~~~i~~~s~I~~~~~~~~~~~~g~~ 153 (334)
T 2pig_A 74 ITGNARITQPCTLYNNVRIGDNVWIDRADISDGARISDNVTIQSSSVREECAIYGDARVLNQSEILAIQGLTHEHAQILQ 153 (334)
T ss_dssp ECTTCEEESSCEEESSCEECTTCEEESCEEESSCEECTTCEEESCEEESSEEECTTCEEESSCEEEC--------CCCEE
T ss_pred ECCCcEEeeeeeECCCcEECCCCEEEeEEEcCCCEEeCCcEEeccEEcCCeEEecCCEEeCCEEEeecceeecccCCCeE
Confidence 3444555555666666666 66777788888888887 67777777776666555543
Q ss_pred ------EeecEEeCCccccchhHHH-hhhhCCCcceEeCCCCEEeee-----EECCCeEEcCCccc
Q 014953 352 ------LKDTMMLGADFYETDAEVA-SLLAEGRVPVGIGENTKIKYE-----QLKPICHIVETKYD 405 (415)
Q Consensus 352 ------i~~sii~~~~~~~~~~~~~-~~~~~~~~~~~Ig~~~~i~~~-----~i~~~~~i~~~~~~ 405 (415)
|.+|+|..++.|+.++.+. +.++++ +.|++++.+.+. +|++++.|+.+++.
T Consensus 154 I~~~a~I~~s~I~~g~~I~~~a~I~~svI~~~---a~I~~~a~V~~~~~~~v~I~~~~~I~g~a~V 216 (334)
T 2pig_A 154 IYDRATVNHSRIVHQVQLYGNATITHAFIEHR---AEVFDFALIEGDKDNNVWICDCAKVYGHARV 216 (334)
T ss_dssp ECTTCEEESCEEETTCEECTTCEEESEEECTT---CEECTTCEEECCSSCCEEECTTCEECTTCEE
T ss_pred ECCCCEEeccEEcCCCEEcCCeEEeCcEEcCC---CEECCCcEECCceeccEEECCCcEEeeeEEE
Confidence 3344444444444444332 233444 566666666533 36666666665544
No 128
>3brk_X Glucose-1-phosphate adenylyltransferase; ADP-glucose pyrophosphorylase, allostery, kinetics, structure-function relationships; 2.10A {Agrobacterium tumefaciens}
Probab=98.67 E-value=3.9e-08 Score=96.06 Aligned_cols=66 Identities=20% Similarity=0.142 Sum_probs=60.0
Q ss_pred cCccCCCeeecCCccccceECCCCEEc-ceEEeeeEEccCcEECCCcEEeecEEeCCccccchhHHHhhhhCCCcceEeC
Q 014953 305 SRRNLPPSKIDDSKIVDSIISHGSFIT-SSFIEHSVVGIRSRINANVHLKDTMMLGADFYETDAEVASLLAEGRVPVGIG 383 (415)
Q Consensus 305 ~~~i~~~~~i~~~~i~~~~ig~~~~I~-~~~i~~svig~~~~ig~~~~i~~sii~~~~~~~~~~~~~~~~~~~~~~~~Ig 383 (415)
++.|+++|.|.++.|.+++||++|+|+ ++.|.+|+||++|.||++|.|.+|+|+++ |.||
T Consensus 324 ~~~ig~~~~I~~~~i~~~~ig~~~~I~~~~~i~~~~i~~~~~i~~~~~i~~~~ig~~-------------------~~i~ 384 (420)
T 3brk_X 324 SSVVSGDCIISGAALNRSLLFTGVRANSYSRLENAVVLPSVKIGRHAQLSNVVIDHG-------------------VVIP 384 (420)
T ss_dssp SCEECSSCEEESCEEESCEECTTCEECTTCEEEEEEECTTCEECTTCEEEEEEECTT-------------------CEEC
T ss_pred CCEECCCCEEcCCEEeCcEEcCCCEECCCCEEcceEEcCCCEECCCCEEeceEECCC-------------------CEEC
Confidence 677888888877888899999999999 79999999999999999999999999999 7888
Q ss_pred CCCEEe
Q 014953 384 ENTKIK 389 (415)
Q Consensus 384 ~~~~i~ 389 (415)
+|++|.
T Consensus 385 ~~~~i~ 390 (420)
T 3brk_X 385 EGLIVG 390 (420)
T ss_dssp TTCEES
T ss_pred CCCEEe
Confidence 888876
No 129
>1j2z_A Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosam acyltransferase; UDP-N-acetylglucosamine acyltransferase, LPXA, LEFT-handed B structure; HET: SOG TLA; 2.10A {Helicobacter pylori} SCOP: b.81.1.1
Probab=98.67 E-value=3.3e-08 Score=90.51 Aligned_cols=74 Identities=14% Similarity=0.098 Sum_probs=51.5
Q ss_pred cCCCCCccccCccCCCeee-cCCccc-cceECCCCEEc-ceEEe-eeEEccCcEECCCcEE-------------eecEEe
Q 014953 296 YDATKPIYTSRRNLPPSKI-DDSKIV-DSIISHGSFIT-SSFIE-HSVVGIRSRINANVHL-------------KDTMML 358 (415)
Q Consensus 296 ~~~~~~~~~~~~i~~~~~i-~~~~i~-~~~ig~~~~I~-~~~i~-~svig~~~~ig~~~~i-------------~~sii~ 358 (415)
++|.+.+.+.+.+++++.| +++.|. ++.||++|.|+ ++.|. ++.||++|.|++++.| .+++|+
T Consensus 4 I~p~a~I~~~a~Ig~~~~Ig~~~~I~~~v~IG~~~~I~~~~~I~g~~~IG~~~~I~~~~~Ig~~~~~~~~~g~~~~~~IG 83 (270)
T 1j2z_A 4 IAKTAIISPKAEINKGVEIGEFCVIGDGVKLDEGVKLHNNVTLQGHTFVGKNTEIFPFAVLGTQPQDLKYKGEYSELIIG 83 (270)
T ss_dssp BCTTCEECTTSEECTTCEECTTCEECTTCEECTTCEECTTCEECSEEEECTTCEECTTCEESCCCSCSSCCSCCCEEEEC
T ss_pred cCCCCEECCCCEECCCCEECCCCEECCCCEECCCCEEcCCcEEeCCeEEcCCCEEEeeeEECcCCccccccCCccceEEC
Confidence 4566666666666666666 566664 77788888887 57776 7888888888888888 456666
Q ss_pred CCccccchhHH
Q 014953 359 GADFYETDAEV 369 (415)
Q Consensus 359 ~~~~~~~~~~~ 369 (415)
+++.|..++.+
T Consensus 84 ~~~~I~~~~~I 94 (270)
T 1j2z_A 84 EDNLIREFCMI 94 (270)
T ss_dssp SSCEECTTCEE
T ss_pred CCCEECCCeEE
Confidence 66666655544
No 130
>3tk8_A 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N- succinyltransferase; ssgcid; 1.80A {Burkholderia pseudomallei}
Probab=98.66 E-value=3.1e-08 Score=92.11 Aligned_cols=53 Identities=21% Similarity=0.355 Sum_probs=26.1
Q ss_pred ccccCccCCCeee-cCCccccceECCCCEEc-ceEEe-eeEEccCcEECCCcEEee
Q 014953 302 IYTSRRNLPPSKI-DDSKIVDSIISHGSFIT-SSFIE-HSVVGIRSRINANVHLKD 354 (415)
Q Consensus 302 ~~~~~~i~~~~~i-~~~~i~~~~ig~~~~I~-~~~i~-~svig~~~~ig~~~~i~~ 354 (415)
+.+.+.+.++++| +++.|...+|+.+|.|| ++.|. +++||++|.||+++.|..
T Consensus 148 I~p~a~I~~~~~IG~g~~I~~~~I~~g~~IG~~~~I~~~~~Ig~~~~IG~~v~I~~ 203 (316)
T 3tk8_A 148 VVPPAIARRGSFIAKNVVLMPSYTNIGAYVDEGTMVDTWATVGSCAQIGKNVHLSG 203 (316)
T ss_dssp ECTTCEEBTTCEECTTCEECSEEECTTCEECTTCEECTTEEECTTCEECTTCEECT
T ss_pred EeCCeEEeCCcEEcCCCEECCCEEeCCCEECCCCEEccceEECCCCEECCCCEEcC
Confidence 3344444444444 34444434555555555 35553 255555555555555544
No 131
>1ssq_A SAT, serine acetyltransferase; LEFT-handed parallel beta helix; 1.85A {Haemophilus influenzae} SCOP: b.81.1.6 PDB: 1sst_A* 1s80_A 1ssm_A 3gvd_A*
Probab=98.65 E-value=6.5e-08 Score=87.52 Aligned_cols=59 Identities=20% Similarity=0.174 Sum_probs=40.6
Q ss_pred eeEEccCcEECCCcEEeec---------EEeCCccccchhHHHhhhhCCCcceEeCCCCEEe-eeEECCCeEEcCCcccC
Q 014953 337 HSVVGIRSRINANVHLKDT---------MMLGADFYETDAEVASLLAEGRVPVGIGENTKIK-YEQLKPICHIVETKYDS 406 (415)
Q Consensus 337 ~svig~~~~ig~~~~i~~s---------ii~~~~~~~~~~~~~~~~~~~~~~~~Ig~~~~i~-~~~i~~~~~i~~~~~~~ 406 (415)
+|+||++|+|++++.|.++ +|+++ |.||.|+.|. +++||++++|++++.+.
T Consensus 163 ~~~IG~~v~I~~gvtig~~~~~~~~~~~~IGd~-------------------v~IGaga~Il~gv~IG~~a~IGagsvV~ 223 (267)
T 1ssq_A 163 TSVIENDVSILQGVTLGGTGKESGDRHPKVREG-------------------VMIGAGAKILGNIEVGKYAKIGANSVVL 223 (267)
T ss_dssp TCEECTTCEECTTCEEECCSSSCSSCSCEECTT-------------------CEECTTCEEESSCEECTTCEECTTCEEC
T ss_pred eeEECCCCEEcCCcEECCCcccCCCCCeEECCC-------------------eEEcCCCEEeCCcEECCCCEECCCCEEc
Confidence 4566666666666666653 44444 7788888876 78888888888888777
Q ss_pred cccccccc
Q 014953 407 STISRFSL 414 (415)
Q Consensus 407 ~~~~~~~~ 414 (415)
+.+.+++.
T Consensus 224 ~dVp~~~~ 231 (267)
T 1ssq_A 224 NPVPEYAT 231 (267)
T ss_dssp SCBCTTCE
T ss_pred cCCCCCCE
Confidence 77766553
No 132
>3jqy_B NEUO, polysialic acid O-acetyltransferase; LEFT-handed beta-helix polysia; HET: PEG; 1.70A {Escherichia coli}
Probab=98.65 E-value=3.7e-08 Score=89.22 Aligned_cols=83 Identities=12% Similarity=0.037 Sum_probs=68.8
Q ss_pred ccceECCCCEEc-ceEEe---eeEEccCcEECCCcEEe----ecEEeCCccccchhHHHhh---------------hhCC
Q 014953 320 VDSIISHGSFIT-SSFIE---HSVVGIRSRINANVHLK----DTMMLGADFYETDAEVASL---------------LAEG 376 (415)
Q Consensus 320 ~~~~ig~~~~I~-~~~i~---~svig~~~~ig~~~~i~----~sii~~~~~~~~~~~~~~~---------------~~~~ 376 (415)
.++.||++|.|. ++.+. +++||++|.|++++.|. ++.|++++.|+.++.+... ...
T Consensus 84 ~~v~Ig~~~~I~~~~~i~~g~~v~IG~~~~Ig~~~~I~~~~~~~~IG~~~~Ig~~~~I~~~~~~~~~~~~~~~~~~~~~- 162 (252)
T 3jqy_B 84 NYVRIHKNSKIKGDIVATKGSKVIIGRRTTIGAGFEVVTDKCNVTIGHDCMIARDVILRASDGHPIFDIHSKKRINWAK- 162 (252)
T ss_dssp CEEEECTTCEEEEEEEEESSCEEEECTTCEECTTCEEECSSSEEEECTTCEECSSEEEECSCSSCEEETTTCBBCCCCC-
T ss_pred CeEEECCCCEECCceEEccCCEEEECCCCEECCCcEEEeCCCCeEECCCCEEcCCcEEecCCCcccccccccccccccC-
Confidence 356799999998 57773 79999999999999999 8999999999888876542 111
Q ss_pred CcceEeCCCCEEe-eeEECCCeEEcCCccc
Q 014953 377 RVPVGIGENTKIK-YEQLKPICHIVETKYD 405 (415)
Q Consensus 377 ~~~~~Ig~~~~i~-~~~i~~~~~i~~~~~~ 405 (415)
+++||++|.|. +|+|.++++|++++.+
T Consensus 163 --~v~Igd~v~IG~~a~I~~gv~IG~~~~I 190 (252)
T 3jqy_B 163 --DIIISSYVWVGRNVSIMKGVSVGSGSVI 190 (252)
T ss_dssp --CEEECSSCEECSSEEECTTCEECTTCEE
T ss_pred --CeEEecCcEECCCCEECCCCEECCCCEE
Confidence 37899999998 9999999999999864
No 133
>3bfp_A Acetyltransferase; LEFT-handed beta helix, COA binding protein, N-glycan biosynthesis, bacillosamine, structural genomics, MKBSGI; HET: FLC; 1.75A {Campylobacter jejuni} SCOP: b.81.1.8 PDB: 2vhe_A* 3bsw_A* 3bss_A* 3bsy_A* 2npo_A
Probab=98.64 E-value=5.3e-08 Score=84.53 Aligned_cols=77 Identities=16% Similarity=0.215 Sum_probs=47.4
Q ss_pred cceEC--CCCEEc-ceEEe-eeEEccCcEECCCcEEe-ecEEeCCccccchhHHHhhhhCCCcceEeCCCCEEe-eeEEC
Q 014953 321 DSIIS--HGSFIT-SSFIE-HSVVGIRSRINANVHLK-DTMMLGADFYETDAEVASLLAEGRVPVGIGENTKIK-YEQLK 394 (415)
Q Consensus 321 ~~~ig--~~~~I~-~~~i~-~svig~~~~ig~~~~i~-~sii~~~~~~~~~~~~~~~~~~~~~~~~Ig~~~~i~-~~~i~ 394 (415)
++.|| ++|.|+ ++.|. ++.||++|.|++++.|. ++.|+++++|.+++.+. .+ ++||++|.|. +++|.
T Consensus 87 ~~~Ig~~~g~~I~~~~~I~~~~~IG~~~~I~~~~~i~~~~~Ig~~~~I~~~~~i~----~~---~~Ig~~~~Ig~~~~i~ 159 (194)
T 3bfp_A 87 SAIVEENAGILIMPYVVINAKAKIEKGVILNTSSVIEHECVIGEFSHVSVGAKCA----GN---VKIGKNCFLGINSCVL 159 (194)
T ss_dssp TCEECTTSCCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEEC----TT---CEECTTCEECTTCEEC
T ss_pred CceeCCCCCcEEcCCCEECCCCEECCCCEECCCCEEcCCCEECCCCEECCCCEEC----CC---cEECCCCEEcCCCEEC
Confidence 44555 555555 34442 57777777777777776 57777775555543332 22 6677777776 66666
Q ss_pred CCeEEcCCcc
Q 014953 395 PICHIVETKY 404 (415)
Q Consensus 395 ~~~~i~~~~~ 404 (415)
++++|++++.
T Consensus 160 ~~~~Ig~~~~ 169 (194)
T 3bfp_A 160 PNLSLADDSI 169 (194)
T ss_dssp TTCEECTTCE
T ss_pred CCCEECCCCE
Confidence 6777776664
No 134
>3t57_A UDP-N-acetylglucosamine O-acyltransferase domain- protein; LEFT-handed parallel beta helix, lipid A biosynthesis, lipid synthesis; 2.10A {Arabidopsis thaliana}
Probab=98.64 E-value=3.9e-08 Score=91.65 Aligned_cols=15 Identities=13% Similarity=0.306 Sum_probs=7.2
Q ss_pred eEEccCcEECCCcEE
Q 014953 338 SVVGIRSRINANVHL 352 (415)
Q Consensus 338 svig~~~~ig~~~~i 352 (415)
++||++|.|++++.|
T Consensus 78 ~~IG~~~~Ig~~a~I 92 (305)
T 3t57_A 78 TFIGCNNIIGHHAVV 92 (305)
T ss_dssp EEECSSCEECTTCEE
T ss_pred eEECCceEECCccEe
Confidence 444444444444444
No 135
>1t3d_A SAT, serine acetyltransferase; LEFT-handed-beta-helix, dimer of trimers; 2.20A {Escherichia coli} SCOP: b.81.1.6
Probab=98.64 E-value=6.8e-08 Score=88.19 Aligned_cols=28 Identities=11% Similarity=0.013 Sum_probs=25.2
Q ss_pred cCeEE--EEcCCeecccChHHHHHHHHHcC
Q 014953 129 IEDVL--ILSGDHLYRMDYMDFVQNHRQSG 156 (415)
Q Consensus 129 ~~~~l--v~~gD~i~~~~l~~~l~~h~~~~ 156 (415)
.+++| ++++|++...+|.++|.+|...+
T Consensus 39 ~EP~L~~~l~~~IL~~~~l~~aLa~~La~k 68 (289)
T 1t3d_A 39 CEPMLASFYHATLLKHENLGSALSYMLANK 68 (289)
T ss_dssp HCGGGHHHHHHHTTTCSSHHHHHHHHHHHH
T ss_pred cCCHHHHHhcccccCCCCHHHHHHHHHhcc
Confidence 58999 99999999999999999998764
No 136
>4ea9_A Perosamine N-acetyltransferase; beta helix, acetyl coenzyme A, GDP-perosa transferase; HET: JBT; 0.90A {Caulobacter vibrioides} PDB: 4ea8_A* 4ea7_A* 4eaa_A* 4eab_A*
Probab=98.63 E-value=8e-08 Score=85.19 Aligned_cols=9 Identities=44% Similarity=0.689 Sum_probs=3.6
Q ss_pred eEeCCCCEE
Q 014953 380 VGIGENTKI 388 (415)
Q Consensus 380 ~~Ig~~~~i 388 (415)
++||++|.|
T Consensus 184 ~~Ig~~~~i 192 (220)
T 4ea9_A 184 VTIGADTIV 192 (220)
T ss_dssp CEECTTCEE
T ss_pred cEECCCCEE
Confidence 334444433
No 137
>3hsq_A Acyl-[acyl-carrier-protein]--UDP-N- acetylglucosamine O-acyltransferase; L.interrogans LPXA, LPXA, LPXA acyltransferase; 2.10A {Leptospira interrogans} SCOP: b.81.1.0 PDB: 3i3a_A* 3i3x_A*
Probab=98.62 E-value=5.8e-08 Score=88.35 Aligned_cols=75 Identities=16% Similarity=0.154 Sum_probs=54.2
Q ss_pred cCCCCCccccCccCCCeee-cCCcc-ccceECCCCEEc-ceEEe-eeEEccCcEECCCcEE--------------eecEE
Q 014953 296 YDATKPIYTSRRNLPPSKI-DDSKI-VDSIISHGSFIT-SSFIE-HSVVGIRSRINANVHL--------------KDTMM 357 (415)
Q Consensus 296 ~~~~~~~~~~~~i~~~~~i-~~~~i-~~~~ig~~~~I~-~~~i~-~svig~~~~ig~~~~i--------------~~sii 357 (415)
++|.+.+.+.+.+++++.| +.+.| .++.||++|.|+ ++.|. ++.||++|.|++++.| .++.|
T Consensus 3 I~p~a~I~~~a~ig~~v~I~~~~~I~~~v~IG~~~~I~~~~~I~~~~~IG~~~~I~~~a~Ig~~~~~~~~~g~~~~~v~I 82 (259)
T 3hsq_A 3 IHPTAIIDPKAELHESVEVGPYSIIEGNVSIQEGTIIEGHVKICAGSEIGKFNRFHQGAVIGVMPQDLGFNQQLLTKTVI 82 (259)
T ss_dssp BCTTCEECTTCEECTTCEECTTCEECSSCEECTTCEECTTCEECTTEEECSSCEECTTCEEEECCSCTTCCTTSCCCEEE
T ss_pred cCCCcEECCCCEECCCCEECCCCEECCCCEECCCCEEcCCcEEcCCcEECCCcEECCCCEECCCcccccccCccCCcEEE
Confidence 3455555556666666666 55555 377888888887 57775 5999999999999999 45777
Q ss_pred eCCccccchhHHH
Q 014953 358 LGADFYETDAEVA 370 (415)
Q Consensus 358 ~~~~~~~~~~~~~ 370 (415)
++++.|.+++.+.
T Consensus 83 G~~~~Ig~~~~I~ 95 (259)
T 3hsq_A 83 GDHNIFREYSNIH 95 (259)
T ss_dssp CSSCEECTTCEEE
T ss_pred CCCcEECCCCEEC
Confidence 8887777777664
No 138
>3r5d_A Tetrahydrodipicolinate N-succinyletransferase; 1.80A {Pseudomonas aeruginosa} PDB: 3r5b_A* 3r5c_A* 3r5a_A
Probab=98.61 E-value=3e-08 Score=90.91 Aligned_cols=98 Identities=16% Similarity=0.135 Sum_probs=67.4
Q ss_pred ccCccCCCeee-cCCccc-cceECCCCEEc-ceEEe-eeEEccCcEECCCcEEeecEEeCCccccchhHHH---------
Q 014953 304 TSRRNLPPSKI-DDSKIV-DSIISHGSFIT-SSFIE-HSVVGIRSRINANVHLKDTMMLGADFYETDAEVA--------- 370 (415)
Q Consensus 304 ~~~~i~~~~~i-~~~~i~-~~~ig~~~~I~-~~~i~-~svig~~~~ig~~~~i~~sii~~~~~~~~~~~~~--------- 370 (415)
....+.+++.| +.+.|. ++.||+||+|+ ++.|. ++.||++|.|..++.+. +.|+++++|.+++.+.
T Consensus 177 ~~~vI~~gv~I~P~AvI~~GA~IGeGv~Igp~a~Vn~na~IGdg~iI~~~a~ig-v~IGdnv~IgpGa~IgG~~~~~~~~ 255 (347)
T 3r5d_A 177 TDYVVPAGVRIADTARVRLGAYIGEGTTVMHEGFVNFNAGTEGPGMIEGRVSAG-VFVGKGSDLGGGCSTMGTLSGGGNI 255 (347)
T ss_dssp GGTCCCTTEEESSGGGBBTTEEECTTEEECTTCEECTTEEESSSEEECSEECTT-CEECTTEEECTTCEECC------CC
T ss_pred cceeccCCcEECCcCEECCCCEECCCCEECCCCEECCCCEECCCcEEcCCceEe-EEECCCCEECCCCEEccccCCCCcc
Confidence 34455555666 445553 56677777777 45553 67777777777666554 7888888888887664
Q ss_pred -hhhhCCCcceEeCCCCEEeeeEECCCeEEcCCcccC
Q 014953 371 -SLLAEGRVPVGIGENTKIKYEQLKPICHIVETKYDS 406 (415)
Q Consensus 371 -~~~~~~~~~~~Ig~~~~i~~~~i~~~~~i~~~~~~~ 406 (415)
..|+++ |.||.|+.| ++.||++++|++|+.+.
T Consensus 256 ~V~IGdn---v~IGAnAtI-GVtIGd~~iIGAGSVVt 288 (347)
T 3r5d_A 256 VISVGEG---CLIGANAGI-GIPLGDRNIVEAGLYIT 288 (347)
T ss_dssp CCEECTT---CEECTTCEE-CSCBCTTCEECTTCEEC
T ss_pred ceEECCC---CEECCCCEE-eeEECCCCEECCCCEEC
Confidence 356777 888888888 77778888888777644
No 139
>3gos_A 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N- succinyltransferase; 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransfera acyltransferase; 1.80A {Yersinia pestis} SCOP: b.81.1.2 PDB: 1kgq_A* 1kgt_A* 2tdt_A* 3tdt_A* 3bxy_A 1tdt_A
Probab=98.60 E-value=1e-07 Score=87.23 Aligned_cols=83 Identities=6% Similarity=0.119 Sum_probs=43.1
Q ss_pred ceECCCCEEcceEEe-eeEEccCcEECCCcEEee-cEEeCCccccchhHH----------HhhhhCCCcceEeCCCCEEe
Q 014953 322 SIISHGSFITSSFIE-HSVVGIRSRINANVHLKD-TMMLGADFYETDAEV----------ASLLAEGRVPVGIGENTKIK 389 (415)
Q Consensus 322 ~~ig~~~~I~~~~i~-~svig~~~~ig~~~~i~~-sii~~~~~~~~~~~~----------~~~~~~~~~~~~Ig~~~~i~ 389 (415)
+.||++|.|+...+. ++.||++|.|+.++.|.+ +.|+++++|..++.+ .+.|+++ |.||.||.|.
T Consensus 117 ~~Ig~g~~I~~~~i~~~~~IG~~~~I~~~~~Ig~~~~IG~~v~I~~~~~i~g~~~~~~~~~v~IGd~---v~IG~~a~I~ 193 (276)
T 3gos_A 117 AFIARNTVLMPSYVNIGAFVDEGTMVDTWATVGSCAQIGKNVHLSGGVGIGGVLEPLQANPTIIEDN---CFVGARSEVV 193 (276)
T ss_dssp CEECTTCEECSEEECTTCEECTTCEECTTEEECTTCEECTTCEECTTCEECCCCSSTTSCCCEECTT---CEECTTCEEC
T ss_pred CEECCCCEEcCCEEcCCeEECCCCEECCCCEECCCCEECCCCEECCCCEECCccccCCCCCeEECCC---CEECCCCEEC
Confidence 344444444322221 444455555544444444 455555555544443 2345555 6666666665
Q ss_pred -eeEECCCeEEcCCcccCc
Q 014953 390 -YEQLKPICHIVETKYDSS 407 (415)
Q Consensus 390 -~~~i~~~~~i~~~~~~~~ 407 (415)
++.||+++.|++++.+.+
T Consensus 194 ~gv~IG~~avIgagsvV~~ 212 (276)
T 3gos_A 194 EGVIVEEGSVISMGVFIGQ 212 (276)
T ss_dssp TTCEECTTCEECTTCEECT
T ss_pred CCCEECCCCEECCCCEECC
Confidence 666666666666666554
No 140
>3eg4_A 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N- succinyltransferase; ssgcid, beta helix, acyltransferase, amino-acid biosynthesis, cytoplasm; 1.87A {Brucella suis}
Probab=98.60 E-value=1e-07 Score=88.28 Aligned_cols=26 Identities=8% Similarity=-0.068 Sum_probs=12.5
Q ss_pred eEeCCCCEEe-eeEECCCeEEcCCccc
Q 014953 380 VGIGENTKIK-YEQLKPICHIVETKYD 405 (415)
Q Consensus 380 ~~Ig~~~~i~-~~~i~~~~~i~~~~~~ 405 (415)
|.||.||.|. +++||+++.|++++.+
T Consensus 209 v~IG~~a~I~~gv~IG~~avIgagsvV 235 (304)
T 3eg4_A 209 CFIGARSEVVEGCIVREGSVLGMGVFI 235 (304)
T ss_dssp CEECTTCEECTTCEECTTCEECTTCEE
T ss_pred CEECCCCEEcCCcEECCCcEECCCCEE
Confidence 4444444443 4455555555555443
No 141
>3st8_A Bifunctional protein GLMU; acetyltransferase, pyrophosphorylase, rossmann fold, LEFT-handed-beta-helix, cell shape; HET: COA GP1 UD1; 1.98A {Mycobacterium tuberculosis} PDB: 3spt_A* 3foq_A 3dk5_A 3d8v_A 3d98_A* 3dj4_A 2qkx_A*
Probab=98.58 E-value=9.8e-08 Score=95.40 Aligned_cols=98 Identities=13% Similarity=0.099 Sum_probs=72.8
Q ss_pred CCCCCccccCccCCCeee-cCCccccceECCCCEEc-ceEEeeeEEccCcEECCCcEEee--------cEEeCCccccch
Q 014953 297 DATKPIYTSRRNLPPSKI-DDSKIVDSIISHGSFIT-SSFIEHSVVGIRSRINANVHLKD--------TMMLGADFYETD 366 (415)
Q Consensus 297 ~~~~~~~~~~~i~~~~~i-~~~~i~~~~ig~~~~I~-~~~i~~svig~~~~ig~~~~i~~--------sii~~~~~~~~~ 366 (415)
.+.+.+.+++.++..+.+ ..+.+++++||++|.|+ .+.+.+|+||++|.||+++.+.| ++|+++++|+.+
T Consensus 344 g~~~~i~~~~~i~~~v~IG~~v~ik~s~Ig~gskI~~~~~i~d~~Ig~~v~IG~g~i~~n~dg~~~~~t~IGd~~~iG~~ 423 (501)
T 3st8_A 344 GPFTYLRPGTALGADGKLGAFVEVKNSTIGTGTKVPHLTYVGDADIGEYSNIGASSVFVNYDGTSKRRTTVGSHVRTGSD 423 (501)
T ss_dssp CSSEEECTTCEECTTCEEEETEEEESCEECTTCEEEESCEEESEEECSSCEECTTCEEECBCSSSBCCEEECTTCEECTT
T ss_pred CCceeecCCcEEccccccCCeEEEccceecCCcEEeccceecCceEcCCCEECCCEEEEcccCCcccCCEECCCcEECCC
Confidence 344445555666666666 56677899999999999 58889999999999999999865 788888777766
Q ss_pred hHHHhhhhCCCcceEeCCCCEEe-eeEECCCeEEcCCc
Q 014953 367 AEVASLLAEGRVPVGIGENTKIK-YEQLKPICHIVETK 403 (415)
Q Consensus 367 ~~~~~~~~~~~~~~~Ig~~~~i~-~~~i~~~~~i~~~~ 403 (415)
+.+.. + +.||+||.|. +|+|.++ |++++
T Consensus 424 ~~l~~----~---v~Ig~~~~i~ags~v~~d--vp~~~ 452 (501)
T 3st8_A 424 TMFVA----P---VTIGDGAYTGAGTVVRED--VPPGA 452 (501)
T ss_dssp CEEES----S---EEECTTCEECTTCEECSC--BCTTC
T ss_pred CEEcC----C---cEECCCCEECCCCEECcc--cCCCC
Confidence 54432 2 7777777776 7777766 45554
No 142
>3gue_A UTP-glucose-1-phosphate uridylyltransferase 2; phosphatase, UDP, structural GE structural genomics consortium, SGC; HET: UPG PG4; 1.92A {Trypanosoma brucei}
Probab=98.57 E-value=3.1e-06 Score=82.04 Aligned_cols=345 Identities=13% Similarity=0.123 Sum_probs=184.0
Q ss_pred cceEEEEEcCCCCCcccccccCCcccceee-CCcceeehhehhhhhcc----CCc-EEEEEcccC-hhHHHHHHHhhccC
Q 014953 7 RTVAAVILGGGAGTRLYPLTKQRAKPAVPI-GGAYRLIDVPMSNCINS----GIN-KVYILTQYN-SASLNRHLARAYNY 79 (415)
Q Consensus 7 ~~~~aVILAaG~g~Rl~plt~~~pK~llpv-~g~~pli~~~l~~l~~~----gi~-~I~vv~~~~-~~~i~~~l~~~~~~ 79 (415)
.++-.|.||||.||||+ ...||.++|+ .|+ ++++..++++... |.. .++|-++.. ++...+++.++..|
T Consensus 75 ~kvavvlLaGGlGTRLG---~~~pKg~~~v~sgk-sflql~~eqI~~l~~~~~~~iPl~IMTS~~T~~~T~~~~~k~~~F 150 (484)
T 3gue_A 75 RQAVVLKLNGGLGTGMG---LNGPKSLLQVKNGQ-TFLDFTALQLEHFRQVRNCNVPFMLMNSFSTSGETKNFLRKYPTL 150 (484)
T ss_dssp TTEEEEEEECCCCGGGT---CSSCGGGSEEETTE-EHHHHHHHHHHHHHHHHTCCCCEEEEECTTTHHHHHHHGGGCHHH
T ss_pred hhcEEEEEcCCcccccC---CCCCceeeecCCCC-cHHHHHHHHHHHHHHHcCCCceEEEECCcchhHHHHHHHHhCccc
Confidence 47889999999999997 7799999999 566 9999999888752 332 456666654 57788888764222
Q ss_pred CC----CcccCCceEEEecCccC-----CCCCCC-ccccchHHHHHHhh--hhhcCCCCCCcCeEEEEcCCeecccChHH
Q 014953 80 GS----GVTFGDGCVEVLAATQT-----PGEAGK-RWFQGTADAVRQFH--WLFEDPRNKVIEDVLILSGDHLYRMDYMD 147 (415)
Q Consensus 80 ~~----~~~~~~~~v~i~~~~~~-----~~~~~~-~~~~Gt~~al~~~~--~~i~~~~~~~~~~~lv~~gD~i~~~~l~~ 147 (415)
+- -.-|....+..+..... ...... -.+.|.|+-..... ..+++....+.+.+.+.+.|.+...---.
T Consensus 151 gl~~~~v~~F~Q~~~P~i~~dg~~~i~~~~~~~i~~~P~GhGdiy~aL~~sGiLd~l~~~Gieyi~v~~vDNL~a~~Dp~ 230 (484)
T 3gue_A 151 YEVFDSDIELMQNRVPKIRQDNFFPVTYEADPTCEWVPPGHGDVYTVLYSSGKLDYLLGKGYRYMFISNGDNLGATLDVR 230 (484)
T ss_dssp HTTCCCCCEEECCCEECEETTTCCBCCCTTCGGGGEECCCGGGHHHHHHHHSHHHHHHHTTCCEEEEEETTCTTCCCCHH
T ss_pred CCCccceEEEEeCceeeEecCCCceeecCCCCceeeccCCchHHHHHHHhCCcHHHHHHcCCEEEEEEcCCCcccccCHH
Confidence 21 11111111111111110 000001 12346655333221 12222111236899999999966543356
Q ss_pred HHHHHHHcCCcEEEEEEEcCCCcCCcccEEEEC---------CCCC--eEEEEEcCCccccccccccccccccccccccc
Q 014953 148 FVQNHRQSGADITISCLPMDDSRASDFGLMKIN---------NEGR--VLSFSEKPKGKDLKAMAVDTTVLGLSKQEAEE 216 (415)
Q Consensus 148 ~l~~h~~~~~~~ti~~~~~~~~~~~~~g~v~~d---------~~~~--v~~~~ek~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (415)
++.++.++++++.+-+.+...+ .+.-|++... .+|+ ++++.+-|..... .+ +. ..
T Consensus 231 ~lG~~~~~~~d~~~kvv~Kt~~-dekgG~l~~~~~~~~~~~~~dG~~~vvEyseip~e~~~-~f-----------~~-~~ 296 (484)
T 3gue_A 231 LLDYMHEKQLGFLMEVCRRTES-DKKGGHLAYKDVIDETTGQTRRRFVLRESAQCPKEDED-SF-----------QN-IA 296 (484)
T ss_dssp HHHHHHHTTCSEEEEEEECCTT-CCSSEEEEEEC--------CCCEEEEEEGGGSCGGGHH-HH-----------TC-TT
T ss_pred HHHHHHhcCCCEEEEEEECCCC-CCceeEEEEEccccccccCCCCCEEEEEeccCCHHHHh-hh-----------cC-CC
Confidence 8888899999999888776653 2345655442 2454 3334333332110 00 00 00
Q ss_pred ccceeeeeEEEEeHHHHHHHHhhhC-----CC-------------------CCcccccchhhhcccceEEEEEeC-ceEE
Q 014953 217 KPYIASMGVYLFKKEILLNLLRWRF-----PT-------------------ANDFGSEIIPASANEQFLKAYLFN-DYWE 271 (415)
Q Consensus 217 ~~~l~~~Giyi~~~~~l~~~l~~~~-----~~-------------------~~~~~~~~l~~l~~~~~i~~~~~~-g~~~ 271 (415)
..-+.+++-.+++-..++++++... +. .+.|..|+++.. .+..++.++ ..|.
T Consensus 297 g~~~FNtnNi~~~l~~l~~~l~~~~g~~~Lp~~vn~K~id~~k~~~~~~iqlE~~~~d~~~~~---~~~~~ieV~R~rF~ 373 (484)
T 3gue_A 297 KHCFFNTNNIWINLMELKKMMDEQLGVLRLPVMRNPKTVNPQDSQSTKVYQLEVAMGAAISLF---DRSEAVVVPRERFA 373 (484)
T ss_dssp TSCEEEEEEEEEEHHHHHHHHHHTTTCCCCCCEEEEEESSTTCTTSCEEEEEECCGGGGGTTS---SSEEEEECCGGGCC
T ss_pred CceEeEeeeEEEEHHHHHHHHHhccCcCCCCcEeccceecCCCCCCCCEeehHHHHHHHHHhC---CccEEEEEChhhcc
Confidence 1234578888999888877776531 10 011222222222 245555554 4588
Q ss_pred ecCCHHHHHHHHHhhcCCCCCCCccC-CCCCccccCccCCCeeecC---Cccc--cceECCC--CEEcceEEeeeEEccC
Q 014953 272 DIGTIRSFFEANLALTAHPPMFSFYD-ATKPIYTSRRNLPPSKIDD---SKIV--DSIISHG--SFITSSFIEHSVVGIR 343 (415)
Q Consensus 272 di~t~~~y~~an~~~l~~~~~~~~~~-~~~~~~~~~~i~~~~~i~~---~~i~--~~~ig~~--~~I~~~~i~~svig~~ 343 (415)
.+.+..|++.+..++......-.+.. +.. ....|.+.+.. ..+. ...+..| +.++ ..+=.|--+
T Consensus 374 PvKn~sdLl~~~Sdly~l~~~~~l~~~~~~-----~~~~P~v~L~~~~~~~v~~f~~rf~~giPsl~~---~~~L~V~Gd 445 (484)
T 3gue_A 374 PVKTCSDLLALRSDAYQVTEDQRLVLCEER-----NGKPPAIDLDGEHYKMIDGFEKLVKGGVPSLRQ---CTSLTVRGL 445 (484)
T ss_dssp CCSSHHHHHHHHSTTEEECTTSCEEECGGG-----TTCCCEEEECTTTSSSHHHHHHHHTTCCCBCTT---EEEEEEESS
T ss_pred ccccchHHHHHhhhceeccCCceEEecccc-----CCCCCeEEECchhcCcHHHHHHhcCCCCCChhh---CCEEEEecc
Confidence 89999999998777654322111111 100 00111122211 1221 1112221 1121 123455567
Q ss_pred cEECCCcEEeecEEeCCccccchhHHHhhhhCCCcceEeCCCCEEeeeEEC
Q 014953 344 SRINANVHLKDTMMLGADFYETDAEVASLLAEGRVPVGIGENTKIKYEQLK 394 (415)
Q Consensus 344 ~~ig~~~~i~~sii~~~~~~~~~~~~~~~~~~~~~~~~Ig~~~~i~~~~i~ 394 (415)
++.|+++.+.+.++.... +| .+..|-+|++++|.++.
T Consensus 446 v~fg~~v~l~G~v~i~~~-------------~g-~~~~ip~g~~l~~~~~~ 482 (484)
T 3gue_A 446 VEFGADVSVRGNVVIKNL-------------KE-EPLIIGSGRVLDNEVVV 482 (484)
T ss_dssp EEECTTCEEEEEEEEEEC-------------SS-SCEEECTTCEEESCEEE
T ss_pred eEECCCcEEEEEEEEEcC-------------CC-CeeecCCCCEecceecC
Confidence 888888888887766431 11 12678999999887763
No 143
>3eev_A Chloramphenicol acetyltransferase; beta-helix, structural genomics, center for STR genomics of infectious diseases, csgid; 2.61A {Vibrio cholerae o1 biovar el tor} SCOP: b.81.1.3
Probab=98.53 E-value=1.5e-07 Score=82.92 Aligned_cols=35 Identities=14% Similarity=0.143 Sum_probs=30.0
Q ss_pred eEeCCCCEEe-eeEECCCeEEcCCcccCcccccccc
Q 014953 380 VGIGENTKIK-YEQLKPICHIVETKYDSSTISRFSL 414 (415)
Q Consensus 380 ~~Ig~~~~i~-~~~i~~~~~i~~~~~~~~~~~~~~~ 414 (415)
|.||.||.|. ++.||+++.|++++.+.+.+-++++
T Consensus 118 v~IG~~a~I~~gv~IG~~~iIgagsvV~~dVp~~~v 153 (212)
T 3eev_A 118 VWIGTEAMIMPGVKIGHGAIIASRSVVTKDVAPYEV 153 (212)
T ss_dssp CEECTTCEECTTCEECTTCEECTTCEECSCBCTTEE
T ss_pred CEECCCCEEcCCCEECCCCEECCCCEEccccCCCcE
Confidence 8888888887 8999999999999988888877764
No 144
>1yp2_A Glucose-1-phosphate adenylyltransferase small subunit; ADP-glucose synthase, ADP-glucose pyrophosphorylase, agpase B; HET: PMB; 2.11A {Solanum tuberosum} SCOP: b.81.1.4 c.68.1.6 PDB: 1yp3_A* 1yp4_A*
Probab=98.52 E-value=6e-08 Score=95.63 Aligned_cols=97 Identities=18% Similarity=0.103 Sum_probs=76.9
Q ss_pred cCccCCCeeecCCccccceECCCCEEc-ceEEeeeEEccC-------------------cEECCCcEEeecEEeCCcccc
Q 014953 305 SRRNLPPSKIDDSKIVDSIISHGSFIT-SSFIEHSVVGIR-------------------SRINANVHLKDTMMLGADFYE 364 (415)
Q Consensus 305 ~~~i~~~~~i~~~~i~~~~ig~~~~I~-~~~i~~svig~~-------------------~~ig~~~~i~~sii~~~~~~~ 364 (415)
++.|+++|+|.++.+.+++||++|.|+ ++.|.++++..+ +.||+++.|.+++|++++.|+
T Consensus 330 ~~~Ig~~~~I~~~~i~~~~Ig~~~~Ig~~~~I~~~~~~~~~~~~~~~~~~~~~~~g~~~~~Ig~~~~i~~~~Ig~~~~IG 409 (451)
T 1yp2_A 330 DSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDSLLMGADYYETDADRKLLAAKGSVPIGIGKNCHIKRAIIDKNARIG 409 (451)
T ss_dssp EEEECTTCEEEEEEEESCEECTTCEECTTCEEESCEECCCSSCCCHHHHHHHHTTTCCCSEECTTCEEESEEECTTCEEC
T ss_pred CeEECCCCEEcceEEeccEECCCCEECCCCEEcCceEECCCCcccccccccccccCceeEEECCCCEEeccEeCCCcEEC
Confidence 456677777744667789999999999 799999888888 999999999999999999888
Q ss_pred chhHHHhh--hhCCCcceEeCCCCEEe-e-eEECCCeEEcCCcc
Q 014953 365 TDAEVASL--LAEGRVPVGIGENTKIK-Y-EQLKPICHIVETKY 404 (415)
Q Consensus 365 ~~~~~~~~--~~~~~~~~~Ig~~~~i~-~-~~i~~~~~i~~~~~ 404 (415)
+++.+... +... ++||++|.|. + ++||+++.|++++.
T Consensus 410 ~~~~i~~~~~~~~~---~~ig~~~~ig~~~v~Ig~~a~i~agsv 450 (451)
T 1yp2_A 410 DNVKIINKDNVQEA---ARETDGYFIKSGIVTVIKDALIPSGII 450 (451)
T ss_dssp TTCEECCSSCCSCE---EEGGGTEEEETTEEEECTTCEECTTCB
T ss_pred CCCEEeCCcccccC---ceeCCCEEEcCCEEEECCCcEECCCcc
Confidence 88877642 2222 3677777776 3 67999999998875
No 145
>3fsy_A Tetrahydrodipicolinate N-succinyltransferase; beta helix, L beta H domain, acyltransferase; HET: SCA; 1.97A {Mycobacterium tuberculosis} PDB: 3fsx_A*
Probab=98.51 E-value=8.1e-08 Score=87.43 Aligned_cols=94 Identities=12% Similarity=0.139 Sum_probs=43.3
Q ss_pred cCCCeee-cCCccc-cceECCCCEEc-ceEEe-eeEEccCcEECCCcEEeecEEeCCccccchhHHHhhh-hCCCcceEe
Q 014953 308 NLPPSKI-DDSKIV-DSIISHGSFIT-SSFIE-HSVVGIRSRINANVHLKDTMMLGADFYETDAEVASLL-AEGRVPVGI 382 (415)
Q Consensus 308 i~~~~~i-~~~~i~-~~~ig~~~~I~-~~~i~-~svig~~~~ig~~~~i~~sii~~~~~~~~~~~~~~~~-~~~~~~~~I 382 (415)
+..++.| +.+.|. ++.||+||+|+ ++.|. ++.++.+|.|...+.+ ++.|+++++|..++.+.... ..++.+++|
T Consensus 158 I~~gv~I~P~AvI~~gA~IGeGv~Igp~~fVniga~Ig~g~~In~~i~i-Gv~IGd~v~IgpGa~IgG~~~~~~~~~V~I 236 (332)
T 3fsy_A 158 VPTGVRIADADRVRLGAHLAPGTTVMHEGFVNYNAGTLGASMVEGRISA-GVVVGDGSDVGGGASIMGTLSGGGTHVISI 236 (332)
T ss_dssp CCTTCEESCGGGBBTTEEECTTCEECTTCEECTTEEESSCCEECSEECT-TCEECTTCEECTTCEECSBCC---CCBCEE
T ss_pred cCCCcEECCcCEECCCCEECCCCEEccccEEEECCeECcCCEECCceec-ceEECCCCEECCCCEEcCCCCCCCccceEE
Confidence 3334444 333332 44555555555 23331 3444444444332222 24555555555544443211 111224666
Q ss_pred CCCCEEe-eeEECCCeEEcCCcc
Q 014953 383 GENTKIK-YEQLKPICHIVETKY 404 (415)
Q Consensus 383 g~~~~i~-~~~i~~~~~i~~~~~ 404 (415)
|++|.|. +|+| +++||+++.
T Consensus 237 GDnv~IGanAtI--gVtIGd~~i 257 (332)
T 3fsy_A 237 GKRCLLGANSGL--GISLGDDCV 257 (332)
T ss_dssp CTTCEECTTCEE--CSCBCSSCE
T ss_pred CCCCEECCCCEE--eeEECCCCE
Confidence 7777666 6666 666666664
No 146
>2v0h_A Bifunctional protein GLMU; cell WALL, magnesium, cell shape, transferase, peptidoglycan synthesis, associative mechanism; 1.79A {Haemophilus influenzae} PDB: 2v0i_A* 2v0j_A* 2v0k_A* 2v0l_A* 2vd4_A* 2w0v_A* 2w0w_A* 3twd_A*
Probab=98.45 E-value=1.3e-07 Score=93.32 Aligned_cols=103 Identities=17% Similarity=0.217 Sum_probs=72.7
Q ss_pred cCCCCCccccCccCCCeee-cCCccccceECCCCEEc-ceEEeeeEEccCcEECCCcEEe-ecEEeCCccccchhHHHhh
Q 014953 296 YDATKPIYTSRRNLPPSKI-DDSKIVDSIISHGSFIT-SSFIEHSVVGIRSRINANVHLK-DTMMLGADFYETDAEVASL 372 (415)
Q Consensus 296 ~~~~~~~~~~~~i~~~~~i-~~~~i~~~~ig~~~~I~-~~~i~~svig~~~~ig~~~~i~-~sii~~~~~~~~~~~~~~~ 372 (415)
+++...+.+.+.|+.++.| +++.|.++.||++|.|+ ++.|.+++||++|.||+++.|. ++.|+++++|++++.+..
T Consensus 274 I~~~~~i~~~~~Ig~~~~I~~~~~i~~~~ig~~~~I~~~~~i~~~~ig~~~~I~~~~~i~~~~~ig~~~~ig~~~~i~~- 352 (456)
T 2v0h_A 274 IDVNVIIEGNVKLGDRVKIGTGCVLKNVVIGNDVEIKPYSVLEDSIVGEKAAIGPFSRLRPGAELAAETHVGNFVEIKK- 352 (456)
T ss_dssp ECSSEEEEEEEEECTTCEECTTCEEEEEEECTTCEECSSCEEEEEEECTTCEECSSEEECTTCEECTTCEEEEEEEEES-
T ss_pred EcCCcEEcCCcEECCCCEECCCCEEEeEEEeCCCEEcCCeEEccCcCCCCcEECCccEECCCCEECCCCEECCCCEEec-
Confidence 3444444445556666666 66777788888888888 6888888888888888888887 578888877777766542
Q ss_pred hhCCCcceEeCCCCEEe------eeEECCCeEEcCCcccC
Q 014953 373 LAEGRVPVGIGENTKIK------YEQLKPICHIVETKYDS 406 (415)
Q Consensus 373 ~~~~~~~~~Ig~~~~i~------~~~i~~~~~i~~~~~~~ 406 (415)
+.||+++.+. +++||+++.|++++...
T Consensus 353 -------~~i~~~~~i~~~~~~~~~~Ig~~v~Ig~~~~i~ 385 (456)
T 2v0h_A 353 -------STVGKGSKVNHLTYVGDSEIGSNCNIGAGVITC 385 (456)
T ss_dssp -------CEECTTCEEEEEEEEESEEECTTCEECTTCEEE
T ss_pred -------cEECCCCEeccceeecCcEECCCcEECCceEEe
Confidence 3455555443 46888888888887543
No 147
>2wlg_A Polysialic acid O-acetyltransferase; enzyme, LEFT-handed beta HEL; HET: SOP; 1.90A {Neisseria meningitidis serogroup Y} PDB: 2wld_A 2wle_A* 2wlf_A* 2wlc_A*
Probab=98.45 E-value=2.2e-07 Score=82.04 Aligned_cols=85 Identities=11% Similarity=-0.011 Sum_probs=65.9
Q ss_pred cceECCCCEEc-ceEEee----eEEccCcEECCCcEE----eecEEeCCccccchhHHHhh----h-----hC---CCcc
Q 014953 321 DSIISHGSFIT-SSFIEH----SVVGIRSRINANVHL----KDTMMLGADFYETDAEVASL----L-----AE---GRVP 379 (415)
Q Consensus 321 ~~~ig~~~~I~-~~~i~~----svig~~~~ig~~~~i----~~sii~~~~~~~~~~~~~~~----~-----~~---~~~~ 379 (415)
++.||++|.|+ ++.+.. +.||++|.|++.+.+ .+++|++++.|+.++.+... + ++ -..+
T Consensus 58 ~v~IG~~~~I~~~~~i~~~~~~~~IG~~~~Ig~~~ii~~~~~~i~IG~~~~Ig~~~~I~~~~~h~~~~~~~~~~~~~~~~ 137 (215)
T 2wlg_A 58 TLFIADDVEIMGLVCSLHSDCSLQIQAKTTMGNGEITIAEKGKISIGKDCMLAHGYEIRNTDMHPIYSLENGERINHGKD 137 (215)
T ss_dssp EEEECTTCEEESEEEEECTTCEEEECTTCEECSEEEEECTTCEEEECTTCEECTTEEEESCCSSCEEETTTCBBCCCCCC
T ss_pred EEEECCCCEECCCeEEEcCCceEEEcCCCEECCEEEEEeCCCCEEECCCCEEcCCEEEECCCCcccccccccccccCCCC
Confidence 38899999998 577763 999999999995555 67899999888888877642 0 00 0014
Q ss_pred eEeCCCCEEe-eeEECCCeEEcCCccc
Q 014953 380 VGIGENTKIK-YEQLKPICHIVETKYD 405 (415)
Q Consensus 380 ~~Ig~~~~i~-~~~i~~~~~i~~~~~~ 405 (415)
++||++|.|. +|+|.++++|++++.+
T Consensus 138 v~Igd~v~IG~~~~I~~gv~Ig~~~vI 164 (215)
T 2wlg_A 138 VIIGNHVWLGRNVTILKGVCIPNNVVV 164 (215)
T ss_dssp EEECTTCEECTTCEECTTCEECSSCEE
T ss_pred eEECCCcEECCCCEECCCCEECCCCEE
Confidence 7899999998 9999999999998864
No 148
>2p2o_A Maltose transacetylase; GK1921, GKA001001921.1, geobacillus kaustophilus structural genomics, PSI; 1.74A {Geobacillus kaustophilus} PDB: 2ic7_A
Probab=98.42 E-value=7.7e-07 Score=76.43 Aligned_cols=57 Identities=16% Similarity=0.076 Sum_probs=35.8
Q ss_pred ccCccCCCeee-cCCcc---ccceECCCCEEc-ceEEe-------------------eeEEccCcEECCCcEEe-ecEEe
Q 014953 304 TSRRNLPPSKI-DDSKI---VDSIISHGSFIT-SSFIE-------------------HSVVGIRSRINANVHLK-DTMML 358 (415)
Q Consensus 304 ~~~~i~~~~~i-~~~~i---~~~~ig~~~~I~-~~~i~-------------------~svig~~~~ig~~~~i~-~sii~ 358 (415)
....+++++++ .++.+ .++.||++|.|+ ++.|. .++||++|.||++|.|. ++.|+
T Consensus 73 ~~v~IG~~~~i~~~~~i~~~~~i~IG~~v~Ig~~v~I~~~~h~~~~~~~~~~~~~~~~v~IGd~v~IG~~~~I~~gv~IG 152 (185)
T 2p2o_A 73 YNIHVGENFFMNFDGVILDVCEVRIGDHCFIGPGVHIYTATHPLDPHERNSGLEYGKPVVIGHNVWIGGRAVINPGVTIG 152 (185)
T ss_dssp TTEEECTTEEECSSEEEECSSCEEECTTCEECTTCEEECEECCSSHHHHHTCCBEECCEEECSSCEECTTCEECTTCEEC
T ss_pred CCEEECCeeEEcCCeEEEeccceEECCCcEEeCCCEEEcCCCcCChhhcccCccccCCeEEcCCeEECCCCEECCCCEEC
Confidence 34556666666 45555 356778888887 56663 46777777777776665 34444
Q ss_pred CC
Q 014953 359 GA 360 (415)
Q Consensus 359 ~~ 360 (415)
++
T Consensus 153 ~~ 154 (185)
T 2p2o_A 153 DN 154 (185)
T ss_dssp TT
T ss_pred CC
Confidence 44
No 149
>3srt_A Maltose O-acetyltransferase; structural genomics, the center structural genomics of infectious diseases, csgid; 2.50A {Clostridium difficile} PDB: 4ebh_A*
Probab=98.42 E-value=7.7e-07 Score=76.68 Aligned_cols=82 Identities=11% Similarity=0.005 Sum_probs=46.8
Q ss_pred cCccCCCeee-cCCccc---cceECCCCEEc-ceEE-------------------eeeEEccCcEECCCcEEe-ecEEeC
Q 014953 305 SRRNLPPSKI-DDSKIV---DSIISHGSFIT-SSFI-------------------EHSVVGIRSRINANVHLK-DTMMLG 359 (415)
Q Consensus 305 ~~~i~~~~~i-~~~~i~---~~~ig~~~~I~-~~~i-------------------~~svig~~~~ig~~~~i~-~sii~~ 359 (415)
+..+++++++ .++.+. ...||++|.|+ ++.| ..++||++|.||.+|.|. ++.|++
T Consensus 76 ~~~IG~~~~i~~~~~i~~~~~i~IG~~~~Ig~~v~I~~~~h~~~~~~~~~~~~~~~~v~IG~~v~IG~~~~I~~gv~IG~ 155 (188)
T 3srt_A 76 NIHVGENFFANYDCIFLDVCKIEIGDNVMLAPNVQIYTAYHPIDAQLRNSGIEYGSPVKIGDNVWIGGGVIITPGITIGD 155 (188)
T ss_dssp TEEECTTEEECTTEEEECSSCEEECSSCEECTTCEEECEECCSSHHHHHTTEEEECCEEECSSCEECTTCEECTTCEECS
T ss_pred CeEECCcccccCceEEecCCceEECCeeEECCCcEEeeCCccCchhhccccceECCCcEECCCcEEcCCCEECCCcEECC
Confidence 3445555555 444443 23677777777 5655 356788888888777665 355555
Q ss_pred CccccchhHHHhhhhCCCcceEeCCCCEEeeeEECCCeEEcCCccc
Q 014953 360 ADFYETDAEVASLLAEGRVPVGIGENTKIKYEQLKPICHIVETKYD 405 (415)
Q Consensus 360 ~~~~~~~~~~~~~~~~~~~~~~Ig~~~~i~~~~i~~~~~i~~~~~~ 405 (415)
+ |.||.++++.+.+-...+.+|.-++.
T Consensus 156 ~-------------------~vIgagsvV~~dvp~~~v~~G~Pa~v 182 (188)
T 3srt_A 156 N-------------------VVIGAGSVVTKDIPPNTVAVGNPCRV 182 (188)
T ss_dssp S-------------------EEECTTCEECSCBCSSEEEETTTTEE
T ss_pred C-------------------CEECCCCEECcccCCCCEEEccCCEE
Confidence 5 66666666664433333444444433
No 150
>3hjj_A Maltose O-acetyltransferase; LEFT-handed beta-helix, acyltransferase, struct genomics; 2.15A {Bacillus anthracis} SCOP: b.81.1.0 PDB: 3igj_A*
Probab=98.33 E-value=1.1e-06 Score=75.89 Aligned_cols=31 Identities=10% Similarity=-0.034 Sum_probs=19.4
Q ss_pred cCccCCCeee-cCCccc---cceECCCCEEc-ceEE
Q 014953 305 SRRNLPPSKI-DDSKIV---DSIISHGSFIT-SSFI 335 (415)
Q Consensus 305 ~~~i~~~~~i-~~~~i~---~~~ig~~~~I~-~~~i 335 (415)
+..+++++++ .++.|. .+.||++|.|+ ++.|
T Consensus 78 ~v~IG~~~~I~~~~~i~~~~~v~IG~~~~Ig~~~~I 113 (190)
T 3hjj_A 78 NIHVGKSFFANFNCVILDVCEVRIGDHCMFAPGVHI 113 (190)
T ss_dssp TEEECTTCEECTTCEEECSSCEEECTTCEECTTCEE
T ss_pred ceEECCceeeCCCeEEEeCCCeEECCceEEcCCcEE
Confidence 4555666666 555553 45677777777 5666
No 151
>4e8l_A Virginiamycin A acetyltransferase; structural genomics, antibiotic resistance, center for struc genomics of infectious diseases (csgid); 2.70A {Staphylococcus aureus}
Probab=98.33 E-value=8.1e-07 Score=78.24 Aligned_cols=41 Identities=15% Similarity=0.169 Sum_probs=32.4
Q ss_pred hhhhCCCcceEeCCCCEEe-eeEECCCeEEcCCcccCcccccccc
Q 014953 371 SLLAEGRVPVGIGENTKIK-YEQLKPICHIVETKYDSSTISRFSL 414 (415)
Q Consensus 371 ~~~~~~~~~~~Ig~~~~i~-~~~i~~~~~i~~~~~~~~~~~~~~~ 414 (415)
+.|+++ |.||.+|.|. ++.||+++.|++++.+.+.+-+++.
T Consensus 119 v~Igd~---v~IG~~a~I~~gv~IG~~~~IgagsvV~~dv~~~~~ 160 (219)
T 4e8l_A 119 IEIGND---VWIGRDVTIMPGVKIGDGAIIAAEAVVTKNVAPYSI 160 (219)
T ss_dssp EEECSS---CEECTTCEECTTCEECTTCEECTTCEECSCBCTTEE
T ss_pred cEECCC---eEECCCCEEcCCCEECCCCEECCCCEEcccCCCCeE
Confidence 345555 7788888887 7899999999999988888877764
No 152
>1ocx_A Maltose O-acetyltransferase; LEFT-handed parallel beta-helix; 2.15A {Escherichia coli} SCOP: b.81.1.3
Probab=98.33 E-value=2.3e-06 Score=73.24 Aligned_cols=49 Identities=10% Similarity=-0.014 Sum_probs=28.8
Q ss_pred cCccCCCeee-cCCccc---cceECCCCEEc-ceEEe-------------------eeEEccCcEECCCcEEe
Q 014953 305 SRRNLPPSKI-DDSKIV---DSIISHGSFIT-SSFIE-------------------HSVVGIRSRINANVHLK 353 (415)
Q Consensus 305 ~~~i~~~~~i-~~~~i~---~~~ig~~~~I~-~~~i~-------------------~svig~~~~ig~~~~i~ 353 (415)
...++.++++ .++.|. .+.||++|.|+ ++.|. +++||++|.||++|.|.
T Consensus 72 ~v~IG~~~~I~~~~~i~~~~~i~IG~~v~Ig~~v~I~~~~h~~~~~~~~~~~~~~~~v~IG~~v~Ig~~a~I~ 144 (182)
T 1ocx_A 72 NIFLGNNFFANFDCVMLDVCPIRIGDNCMLAPGVHIYTATHPIDPVARNSGAELGKPVTIGNNVWIGGRAVIN 144 (182)
T ss_dssp TEEECSSEEECSSEEEECSSCEEECTTCEECTTCEEECEECCSSHHHHTTTCBEECCEEECTTCEECTTCEEC
T ss_pred CEEECCCcEEeCCeEEEeccceEEcCCcEEeCCcEEEeCCCccChhhcccCccccCCeEEeCCeEECCCCEEC
Confidence 4445555555 444442 46677777777 56652 46666666666655543
No 153
>3mc4_A WW/RSP5/WWP domain:bacterial transferase hexapept repeat:serine O-acetyltransferase...; ssgcid, structural genomics; 1.95A {Brucella melitensis biovar abortus}
Probab=98.33 E-value=1.2e-06 Score=79.83 Aligned_cols=60 Identities=10% Similarity=-0.000 Sum_probs=32.6
Q ss_pred CccccCccCCCeeec---CCccc-cceECCCCEEc-ceEEee---------eEEccCcEECCCcEEee-cEEeCC
Q 014953 301 PIYTSRRNLPPSKID---DSKIV-DSIISHGSFIT-SSFIEH---------SVVGIRSRINANVHLKD-TMMLGA 360 (415)
Q Consensus 301 ~~~~~~~i~~~~~i~---~~~i~-~~~ig~~~~I~-~~~i~~---------svig~~~~ig~~~~i~~-sii~~~ 360 (415)
.+.+++.|++++.|. ++.|. ++.||++|.|+ +++|.. ++||++|.||++|+|.+ +.|+++
T Consensus 166 ~I~p~a~IG~~v~I~hg~gvvIG~~~~IGd~v~I~~gvtIg~~~~~~~~r~~~IGd~v~IGaga~Il~gv~IG~~ 240 (287)
T 3mc4_A 166 DIHPAARLGSGLFLDHATGLVVGETAVVEDNVSILHGVTLGGTGKSSGDRHPKIRQGVLIGAGAKILGNIQVGQC 240 (287)
T ss_dssp EECTTCEECSSCEEESCTTCEECTTCEECSSCEEETTCEEEC-----CCCSCEECTTCEECTTCEEESSCEECTT
T ss_pred EECCCCEECCCeEEccCCCeEECCCeEECCCCEEcCCCEEcCCcccCCCcCCEECCCCEECCCCEECCCcEECCC
Confidence 344445555555552 23332 45666666665 455543 56777777776666654 445555
No 154
>3nz2_A Hexapeptide-repeat containing-acetyltransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: ACO; 2.35A {Vibrio cholerae o1 biovar eltor} SCOP: b.81.1.0 PDB: 3ect_A*
Probab=98.31 E-value=1.8e-06 Score=74.79 Aligned_cols=31 Identities=16% Similarity=0.046 Sum_probs=15.4
Q ss_pred cCccCCCeee-cCCccc---cceECCCCEEc-ceEE
Q 014953 305 SRRNLPPSKI-DDSKIV---DSIISHGSFIT-SSFI 335 (415)
Q Consensus 305 ~~~i~~~~~i-~~~~i~---~~~ig~~~~I~-~~~i 335 (415)
++.|+.+++| .++.|. ...||++|.|+ ++.|
T Consensus 76 ~v~IG~~~~I~~~~~i~~~~~i~IG~~~~Ig~~~~I 111 (195)
T 3nz2_A 76 TIRIGDHTFINMNVVMLDGAPITIGDHVLIGPSTQF 111 (195)
T ss_dssp TEEECTTCEECTTEEEECSSCEEECTTCEECTTCEE
T ss_pred CeEECCCcEECcCCEEecCceEEECCCCEECCCCEE
Confidence 3444444444 344442 23566666666 4544
No 155
>1t3d_A SAT, serine acetyltransferase; LEFT-handed-beta-helix, dimer of trimers; 2.20A {Escherichia coli} SCOP: b.81.1.6
Probab=98.31 E-value=1.4e-06 Score=79.55 Aligned_cols=35 Identities=17% Similarity=0.071 Sum_probs=26.8
Q ss_pred eEeCCCCEEe-eeEECCCeEEcCCcccCcccccccc
Q 014953 380 VGIGENTKIK-YEQLKPICHIVETKYDSSTISRFSL 414 (415)
Q Consensus 380 ~~Ig~~~~i~-~~~i~~~~~i~~~~~~~~~~~~~~~ 414 (415)
|.||.||.|. ++.||++++|++++.+.+.+..++.
T Consensus 216 v~IGaga~Ilggv~IG~~a~IGagsvV~~dVp~~s~ 251 (289)
T 1t3d_A 216 VMIGAGAKILGNIEVGRGAKIGAGSVVLQPVPPHTT 251 (289)
T ss_dssp CEECTTCEEESSCEECTTCEECTTCEECSCBCTTCE
T ss_pred eEECCCCEEecCcEECCCCEECCCCEEccCCCCCCE
Confidence 7888888876 7888888888888877777766653
No 156
>1mr7_A Streptogramin A acetyltransferase; LEFT-handed parallel beta-helix domain; 1.80A {Enterococcus faecium} SCOP: b.81.1.3 PDB: 1khr_A* 1kk5_A 1kk4_A 1kk6_A 1mr9_A* 1mrl_A* 3dho_A*
Probab=98.29 E-value=1.2e-06 Score=76.76 Aligned_cols=75 Identities=12% Similarity=0.179 Sum_probs=48.1
Q ss_pred eeEEccCcEECCCcEEee---cEEeCC-----ccccchh----------HH--HhhhhCCCcceEeCCCCEEe-eeEECC
Q 014953 337 HSVVGIRSRINANVHLKD---TMMLGA-----DFYETDA----------EV--ASLLAEGRVPVGIGENTKIK-YEQLKP 395 (415)
Q Consensus 337 ~svig~~~~ig~~~~i~~---sii~~~-----~~~~~~~----------~~--~~~~~~~~~~~~Ig~~~~i~-~~~i~~ 395 (415)
+++||++|.|+++++|.. ...+.+ ..++.++ .+ .+.++++ |.||.+|.|. ++.||+
T Consensus 60 ~v~IG~~~~Ig~gv~I~~~~~~h~~~~~~~~~~~i~~~~~~~~~i~~~~~~~~~v~Ig~~---v~IG~~a~I~~gv~Ig~ 136 (209)
T 1mr7_A 60 KLKIGKFCSIGPGVTIIMNGANHRMDGSTYPFNLFGNGWEKHMPKLDQLPIKGDTIIGND---VWIGKDVVIMPGVKIGD 136 (209)
T ss_dssp CEEECSSCEECTTCEEECGGGCCCCSSCCCCGGGGCTTGGGGCCCGGGSCCCCCEEECSS---CEECTTCEECTTCEECT
T ss_pred CEEECCCCEEcCCCEEEeCCCcccccCccccceEECCcccccccccccccccCCcEECCC---CEEcCCCEEcCCCEECC
Confidence 468888888888887631 111111 1111111 11 1345555 7788888887 789999
Q ss_pred CeEEcCCcccCcccccccc
Q 014953 396 ICHIVETKYDSSTISRFSL 414 (415)
Q Consensus 396 ~~~i~~~~~~~~~~~~~~~ 414 (415)
++.|++++.+.+.+-++++
T Consensus 137 ~~~Igags~V~~~v~~~~i 155 (209)
T 1mr7_A 137 GAIVAANSVVVKDIAPYML 155 (209)
T ss_dssp TCEECTTCEECSCBCTTEE
T ss_pred CCEEcCCCEEcCCCCCCeE
Confidence 9999999988888877764
No 157
>3q1x_A Serine acetyltransferase; cysteine biosynthesis, LEFT handed helix, OASS; 1.59A {Entamoeba histolytica} PDB: 3p47_A 3p1b_A
Probab=98.29 E-value=8.3e-07 Score=82.10 Aligned_cols=19 Identities=5% Similarity=0.067 Sum_probs=10.0
Q ss_pred CceEEecCCHHHHHHHHHhhcCC
Q 014953 267 NDYWEDIGTIRSFFEANLALTAH 289 (415)
Q Consensus 267 ~g~~~di~t~~~y~~an~~~l~~ 289 (415)
+|+|. ...|..|...+...
T Consensus 128 pG~~a----l~~yRlah~L~~~~ 146 (313)
T 3q1x_A 128 PGFQA----VIVYRIAHVLYECG 146 (313)
T ss_dssp HHHHH----HHHHHHHHHHHHTT
T ss_pred cCHHH----HHHHHHHHHHHHcC
Confidence 45554 45555666555443
No 158
>1ssq_A SAT, serine acetyltransferase; LEFT-handed parallel beta helix; 1.85A {Haemophilus influenzae} SCOP: b.81.1.6 PDB: 1sst_A* 1s80_A 1ssm_A 3gvd_A*
Probab=98.29 E-value=1.3e-06 Score=78.89 Aligned_cols=28 Identities=11% Similarity=0.012 Sum_probs=25.0
Q ss_pred cCeEE--EEcCCeecccChHHHHHHHHHcC
Q 014953 129 IEDVL--ILSGDHLYRMDYMDFVQNHRQSG 156 (415)
Q Consensus 129 ~~~~l--v~~gD~i~~~~l~~~l~~h~~~~ 156 (415)
.+++| ++++|++...+|.++|.+|...+
T Consensus 19 ~EP~L~~~l~~~IL~~~~l~~aLa~~la~k 48 (267)
T 1ssq_A 19 NEPMLASFFHSTILKHQNLGGALSYLLANK 48 (267)
T ss_dssp HCHHHHHHHHHHTTTSSSHHHHHHHHHHHH
T ss_pred cCCHHHHHhcccccCCCCHHHHHHHHHhcc
Confidence 48899 99999999999999999998764
No 159
>3f1x_A Serine acetyltransferase; NESG X-RAY BVR62 A6KZB9 A6KZB9_BACV8, structural genomics, P protein structure initiative; 2.00A {Bacteroides vulgatus atcc 8482}
Probab=98.28 E-value=1.6e-06 Score=80.08 Aligned_cols=15 Identities=20% Similarity=0.275 Sum_probs=6.5
Q ss_pred eEeCCCCEEe-eeEEC
Q 014953 380 VGIGENTKIK-YEQLK 394 (415)
Q Consensus 380 ~~Ig~~~~i~-~~~i~ 394 (415)
++||+||.|. +++|.
T Consensus 270 v~IGd~a~IGagsvV~ 285 (310)
T 3f1x_A 270 VTIGKGATVGGNIWVT 285 (310)
T ss_dssp CEECTTCEECSSCEEC
T ss_pred cEECCCCEECCCCEEC
Confidence 4444444443 44444
No 160
>1krr_A Galactoside O-acetyltransferase; LEFT-handed parallel beta helix; HET: ACO; 2.50A {Escherichia coli} SCOP: b.81.1.3 PDB: 1kqa_A* 1kru_A* 1krv_A*
Probab=98.27 E-value=4.2e-06 Score=72.73 Aligned_cols=31 Identities=13% Similarity=-0.028 Sum_probs=17.4
Q ss_pred cCccCCCeee-cCCccc---cceECCCCEEc-ceEE
Q 014953 305 SRRNLPPSKI-DDSKIV---DSIISHGSFIT-SSFI 335 (415)
Q Consensus 305 ~~~i~~~~~i-~~~~i~---~~~ig~~~~I~-~~~i 335 (415)
...|+.++++ .++.+. .+.||++|.|+ ++.|
T Consensus 75 ~i~IG~~~~I~~~~~i~~~~~i~IG~~v~Ig~~v~I 110 (203)
T 1krr_A 75 NIHIGRNFYANFNLTIVDDYTVTIGDNVLIAPNVTL 110 (203)
T ss_dssp TEEECSSCEECSCEEEECSSCEEECSSCEECSSCEE
T ss_pred CeEECCeeEECCccEEecccceEECCCCEECCCCEE
Confidence 4445555555 344443 35677777777 5555
No 161
>3ftt_A Putative acetyltransferase sacol2570; galactoside O-acetyltransferase, enzyme, structural genomics, acyltransferase; 1.60A {Staphylococcus aureus subsp} PDB: 3v4e_A* 4dcl_A 4egg_A
Probab=98.17 E-value=4.7e-06 Score=72.43 Aligned_cols=31 Identities=10% Similarity=0.055 Sum_probs=16.3
Q ss_pred cCccCCCeee-cCCccc---cceECCCCEEc-ceEE
Q 014953 305 SRRNLPPSKI-DDSKIV---DSIISHGSFIT-SSFI 335 (415)
Q Consensus 305 ~~~i~~~~~i-~~~~i~---~~~ig~~~~I~-~~~i 335 (415)
++.++++++| .++.|. .+.||++|.|+ ++.|
T Consensus 74 ~~~IG~~~~I~~~~~i~~~~~v~IG~~v~Ig~~~~I 109 (199)
T 3ftt_A 74 NVKLGKNVYVNTNCYFMDGGQITIGDNVFIGPNCGF 109 (199)
T ss_dssp TEEECSSEEECTTEEEECSSCEEECSSEEECTTCEE
T ss_pred CcEECCCeEECCCeEEecCCEEEECCCCEECCCCEE
Confidence 3445555555 444442 34666666666 4555
No 162
>1xat_A Xenobiotic acetyltransferase; chloramphenicol, LEFT-handed helix; 3.20A {Pseudomonas aeruginosa} SCOP: b.81.1.3 PDB: 2xat_A*
Probab=98.14 E-value=8.3e-06 Score=71.37 Aligned_cols=40 Identities=13% Similarity=0.137 Sum_probs=32.1
Q ss_pred hhhCCCcceEeCCCCEEe-eeEECCCeEEcCCcccCcccccccc
Q 014953 372 LLAEGRVPVGIGENTKIK-YEQLKPICHIVETKYDSSTISRFSL 414 (415)
Q Consensus 372 ~~~~~~~~~~Ig~~~~i~-~~~i~~~~~i~~~~~~~~~~~~~~~ 414 (415)
.|+++ |.||.+|.|. ++.||+++.|++++.+.+.+.++++
T Consensus 112 ~IG~~---v~IG~~a~I~~gv~Ig~~~~IgagsvV~~~vp~~~~ 152 (212)
T 1xat_A 112 LIGHE---VWIGTEAMFMPGVRVGHGAIIGSRALVTGDVEPYAI 152 (212)
T ss_dssp EECTT---CEECTTCEECTTCEECTTCEECTTCEECSCBCTTEE
T ss_pred EECCC---CEECCCCEEeCCCEECCCCEECCCCEEcccCCCCcE
Confidence 44555 7788888887 8999999999999998888887764
No 163
>4hur_A Virginiamycin A acetyltransferase; structural genomics, antibiotic resistance, center for struc genomics of infectious diseases (csgid); HET: ACO; 2.15A {Staphylococcus aureus} PDB: 4hus_A* 4e8l_A
Probab=98.08 E-value=1.3e-06 Score=77.34 Aligned_cols=28 Identities=18% Similarity=0.323 Sum_probs=16.9
Q ss_pred cceECCCCEEcceEEeeeEEccCcEECCCcEE
Q 014953 321 DSIISHGSFITSSFIEHSVVGIRSRINANVHL 352 (415)
Q Consensus 321 ~~~ig~~~~I~~~~i~~svig~~~~ig~~~~i 352 (415)
+++|+++|.|++ +++||++|.|+++++|
T Consensus 54 ~~vI~~~~~Ig~----~v~IG~~~~Ig~~v~i 81 (220)
T 4hur_A 54 DQVLYHYEVIGD----KLIIGRFCSIGPGTTF 81 (220)
T ss_dssp GGEESCCTTTCC----CEEECSSCEECTTCEE
T ss_pred CeEEeCCCEECC----CeEECCCCEECCCCEE
Confidence 344555554442 4677777777777775
No 164
>3eev_A Chloramphenicol acetyltransferase; beta-helix, structural genomics, center for STR genomics of infectious diseases, csgid; 2.61A {Vibrio cholerae o1 biovar el tor} SCOP: b.81.1.3
Probab=97.98 E-value=1.4e-05 Score=70.11 Aligned_cols=14 Identities=21% Similarity=0.237 Sum_probs=5.9
Q ss_pred eEEccCcEECCCcE
Q 014953 338 SVVGIRSRINANVH 351 (415)
Q Consensus 338 svig~~~~ig~~~~ 351 (415)
+.||++|.|++++.
T Consensus 59 v~IG~~~~I~~~v~ 72 (212)
T 3eev_A 59 LVIGSFCSIGSGAV 72 (212)
T ss_dssp EEECSSCEECTTCE
T ss_pred cEECCCCEECCCCE
Confidence 34444444444443
No 165
>2rij_A Putative 2,3,4,5-tetrahydropyridine-2-carboxylate succinyltransferase; structural genomics, joint center for structural genomics; HET: MSE CIT; 1.90A {Campylobacter jejuni}
Probab=97.86 E-value=1.8e-05 Score=74.80 Aligned_cols=52 Identities=15% Similarity=0.087 Sum_probs=29.8
Q ss_pred eeEEccCcEECCCcEEee---------cEEeCCccccchhHHHhhhhCCCcceEeCCCCEEeeeEECCCeEEcCCcccCc
Q 014953 337 HSVVGIRSRINANVHLKD---------TMMLGADFYETDAEVASLLAEGRVPVGIGENTKIKYEQLKPICHIVETKYDSS 407 (415)
Q Consensus 337 ~svig~~~~ig~~~~i~~---------sii~~~~~~~~~~~~~~~~~~~~~~~~Ig~~~~i~~~~i~~~~~i~~~~~~~~ 407 (415)
+++||++|.|++++.|.+ ++|+++ |.||.||. .++.||+++.|++++.+.+
T Consensus 264 ~vvIGdnv~Ig~ga~I~g~l~g~~~~~VvIGdn-------------------v~IGagAv-~GV~IGdgavIGAGsVVt~ 323 (387)
T 2rij_A 264 SAIVGEGSDVGGGASILGVLSGTSGNAISVGKA-------------------CLLGANSV-TGIPLGDNCIVDAGIAVLE 323 (387)
T ss_dssp TCEECTTCEECTTCEECCBCSSTTCCBCEECTT-------------------CEECTTCE-ECSCBCTTCEECTTCEECT
T ss_pred CCEECCCCEECCCceEcceecCCCccCeEEeCC-------------------CEECCCCc-CCcEECCCCEECCCCEECC
Confidence 466777777777665332 445555 55555555 5555555555555555444
Q ss_pred c
Q 014953 408 T 408 (415)
Q Consensus 408 ~ 408 (415)
.
T Consensus 324 d 324 (387)
T 2rij_A 324 G 324 (387)
T ss_dssp T
T ss_pred C
Confidence 3
No 166
>3ogz_A UDP-sugar pyrophosphorylase; LEFT handed beta helix, rossmann fold, UDP sugar pyrophospho transferase; 2.03A {Leishmania major} PDB: 3oh3_A* 3oh1_A* 3oh0_A* 3oh2_A* 3oh4_A*
Probab=97.59 E-value=0.00041 Score=69.08 Aligned_cols=223 Identities=17% Similarity=0.193 Sum_probs=119.6
Q ss_pred cceEEEEEcCCCCCcccccccCCcccceeeC---Ccceeehhehhhhhc-cCCc-EEEEEccc-ChhHHHHHHHhhccCC
Q 014953 7 RTVAAVILGGGAGTRLYPLTKQRAKPAVPIG---GAYRLIDVPMSNCIN-SGIN-KVYILTQY-NSASLNRHLARAYNYG 80 (415)
Q Consensus 7 ~~~~aVILAaG~g~Rl~plt~~~pK~llpv~---g~~pli~~~l~~l~~-~gi~-~I~vv~~~-~~~~i~~~l~~~~~~~ 80 (415)
.++..|+||||.||||+ ...||.++|++ ++ +++++.++++.+ .|.. .++|-++. .++...+++.+ +.+.
T Consensus 113 ~kvavvllaGGlGTRLG---~~~pK~~lpv~~~s~k-s~lql~~e~i~~~~g~~iPl~IMTS~~T~~~T~~~~~~-fgl~ 187 (630)
T 3ogz_A 113 CKTVFVLVAGGLGERLG---YSSIKVSLPVETATNT-TYLAYYLRWAQRVGGKEVPFVIMTSDDTHDRTLQLLRE-LQLE 187 (630)
T ss_dssp GGEEEEEECCCEEGGGT---EEEEGGGSBSCTTTCC-BHHHHHHHHHHHHHCTTCCEEEEECTTTHHHHHHHHHH-TTCC
T ss_pred hhceEEEecCCcccccC---CCCCcccceecCCCCC-cHHHHHHHHHHHHhCCCCcEEEEecccchHHHHHHHHH-hCCC
Confidence 37889999999999997 78999999997 88 999999999986 3432 45555554 45788888876 4221
Q ss_pred CC-c-ccCCceEEEecCcc-C-C-CCCC--CccccchHHHHHHhh--h------------------hhcCCCCCCcCeEE
Q 014953 81 SG-V-TFGDGCVEVLAATQ-T-P-GEAG--KRWFQGTADAVRQFH--W------------------LFEDPRNKVIEDVL 133 (415)
Q Consensus 81 ~~-~-~~~~~~v~i~~~~~-~-~-~~~~--~~~~~Gt~~al~~~~--~------------------~i~~~~~~~~~~~l 133 (415)
.. . -|....+-.+.... . . .+.+ .-.+.|.|+-..... . .++++...+.+.+.
T Consensus 188 ~~~V~~F~Q~~~P~i~~~~g~l~l~~~~~i~~~P~GhGdv~~aL~~sG~~~~~~~~~~~~~~~~~~lLd~l~~~Gieyi~ 267 (630)
T 3ogz_A 188 VPNLHVLKQGQVFCFADSAAHLALDETGKLLRKPHGHGDVHSLIYNATVKRDVVPDSGDGTATAQPLVNDWLAAGYESIV 267 (630)
T ss_dssp CTTEEEEECCCEECBSSTTCCBCBCTTSSBCEECCCTTHHHHHHHHCBC--------------CCBHHHHHHHTTCCEEE
T ss_pred cccEEEEEcCCEEEEecCCCceeecCCCcccCCCCCCHHHHHHHHHcCCCcccccccccccccHHHHHHHHHHcCCEEEE
Confidence 11 0 01111111111000 0 0 0001 112345555333221 1 22221112468999
Q ss_pred EEcCCe-ecccChHHHHHHHHHcCCcEEEEEEEcCCCcCCcccEEEE--CCCCCe-E-EEEEcCCccccccccc--cccc
Q 014953 134 ILSGDH-LYRMDYMDFVQNHRQSGADITISCLPMDDSRASDFGLMKI--NNEGRV-L-SFSEKPKGKDLKAMAV--DTTV 206 (415)
Q Consensus 134 v~~gD~-i~~~~l~~~l~~h~~~~~~~ti~~~~~~~~~~~~~g~v~~--d~~~~v-~-~~~ek~~~~~~~~~~~--~~~~ 206 (415)
+.+.|. +...---.++.++.++++++.+-+.+... ...-|.+.. ..+|+. . .+.|....+..-.... +...
T Consensus 268 v~~vDN~L~~~~DP~~lG~~~~~~~d~~~kvv~r~p--~E~vG~l~~~~~~dGk~~~v~vVEYsei~~~~~~~~~~~g~~ 345 (630)
T 3ogz_A 268 FIQDTNAGATITIPISLALSAEHSLDMNFTCIPRVP--KEPIGLLCRTKKNSGDPWLVANVEYNVFAEVSRALNKDGGDE 345 (630)
T ss_dssp EECTTBTTHHHHHHHHHHHHHHTTCSEEEEEECCCS--SCSSCEEEEEESSTTSCCEEEEECHHHHHHHHHHC-------
T ss_pred EEccCCccccccCHHHhHHHHhcCCCEEEEEEECCC--CcceeeEEEEecCCCceeeeeEEEeccCCHhHhhccCCCccc
Confidence 999999 43333345788888899999888776432 344565554 245666 2 2344221110000000 0000
Q ss_pred ccccccccccccceeeeeEEEEeHHHHHHHHhh
Q 014953 207 LGLSKQEAEEKPYIASMGVYLFKKEILLNLLRW 239 (415)
Q Consensus 207 ~~~~~~~~~~~~~l~~~Giyi~~~~~l~~~l~~ 239 (415)
+ . .....+.+..++...+|+-+.+.+.+..
T Consensus 346 ~--~-~~~~~~~f~GNtNnl~~~L~a~~~~l~~ 375 (630)
T 3ogz_A 346 V--S-DPTGFSPFPGSVNTLVFKLSSYVDRLRE 375 (630)
T ss_dssp --------CCCSSCEEEEEEEEEHHHHHHHHHH
T ss_pred c--c-cccccccccccceeeeEEHHHHHHHHHh
Confidence 0 0 0000133455889999999855555553
No 167
>4e8l_A Virginiamycin A acetyltransferase; structural genomics, antibiotic resistance, center for struc genomics of infectious diseases (csgid); 2.70A {Staphylococcus aureus}
Probab=97.36 E-value=0.00021 Score=62.77 Aligned_cols=27 Identities=19% Similarity=0.156 Sum_probs=20.9
Q ss_pred ceEeCCCCEEe-eeEECCCeEEcCCccc
Q 014953 379 PVGIGENTKIK-YEQLKPICHIVETKYD 405 (415)
Q Consensus 379 ~~~Ig~~~~i~-~~~i~~~~~i~~~~~~ 405 (415)
+++||++|.|. +|+|.++++|++++.+
T Consensus 118 ~v~Igd~v~IG~~a~I~~gv~IG~~~~I 145 (219)
T 4e8l_A 118 DIEIGNDVWIGRDVTIMPGVKIGDGAII 145 (219)
T ss_dssp CEEECSSCEECTTCEECTTCEECTTCEE
T ss_pred CcEECCCeEECCCCEEcCCCEECCCCEE
Confidence 37788888887 8888888888887753
No 168
>1xat_A Xenobiotic acetyltransferase; chloramphenicol, LEFT-handed helix; 3.20A {Pseudomonas aeruginosa} SCOP: b.81.1.3 PDB: 2xat_A*
Probab=97.34 E-value=0.00028 Score=61.61 Aligned_cols=25 Identities=16% Similarity=0.076 Sum_probs=15.4
Q ss_pred eEeCCCCEEe-eeEECCCeEEcCCcc
Q 014953 380 VGIGENTKIK-YEQLKPICHIVETKY 404 (415)
Q Consensus 380 ~~Ig~~~~i~-~~~i~~~~~i~~~~~ 404 (415)
++||++|.|. +|+|.++++|++++.
T Consensus 111 v~IG~~v~IG~~a~I~~gv~Ig~~~~ 136 (212)
T 1xat_A 111 TLIGHEVWIGTEAMFMPGVRVGHGAI 136 (212)
T ss_dssp EEECTTCEECTTCEECTTCEECTTCE
T ss_pred eEECCCCEECCCCEEeCCCEECCCCE
Confidence 5666666665 666666666666653
No 169
>1mr7_A Streptogramin A acetyltransferase; LEFT-handed parallel beta-helix domain; 1.80A {Enterococcus faecium} SCOP: b.81.1.3 PDB: 1khr_A* 1kk5_A 1kk4_A 1kk6_A 1mr9_A* 1mrl_A* 3dho_A*
Probab=97.21 E-value=0.00039 Score=60.56 Aligned_cols=14 Identities=21% Similarity=0.387 Sum_probs=5.8
Q ss_pred eEEccCcEECCCcE
Q 014953 338 SVVGIRSRINANVH 351 (415)
Q Consensus 338 svig~~~~ig~~~~ 351 (415)
++||++|.||.++.
T Consensus 114 v~Ig~~v~IG~~a~ 127 (209)
T 1mr7_A 114 TIIGNDVWIGKDVV 127 (209)
T ss_dssp EEECSSCEECTTCE
T ss_pred cEECCCCEEcCCCE
Confidence 33444444443333
No 170
>2i5e_A Hypothetical protein MM_2497; APC86122, methanosarcina mazei GO1, hypothetic protein, STRU genomics, PSI-2, protein structure initiative; 2.10A {Methanosarcina mazei} SCOP: c.68.1.21
Probab=96.88 E-value=0.00034 Score=61.10 Aligned_cols=105 Identities=21% Similarity=0.212 Sum_probs=69.1
Q ss_pred cceEEEEEc--CCCCCcccccccCCcccceeeCCcceeehhehhhhhccCCcEE-EEEcccChhHHHHHHHhhccCCCCc
Q 014953 7 RTVAAVILG--GGAGTRLYPLTKQRAKPAVPIGGAYRLIDVPMSNCINSGINKV-YILTQYNSASLNRHLARAYNYGSGV 83 (415)
Q Consensus 7 ~~~~aVILA--aG~g~Rl~plt~~~pK~llpv~g~~pli~~~l~~l~~~gi~~I-~vv~~~~~~~i~~~l~~~~~~~~~~ 83 (415)
..|.+||++ +...|||.|. ..+......++ ||++|+++.+..++++.+ ++++++.. .. .+
T Consensus 2 ~~~~~vip~k~g~~KtRL~~~---l~~~~~~~l~~-~ll~~vl~~l~~~~~~~v~vvv~~~~~--~~-----~~------ 64 (211)
T 2i5e_A 2 NAMRAVIPYKKAGAKSRLSPV---LSLQEREEFVE-LMLNQVISSLKGAGIEQVDILSPSVYG--LE-----EM------ 64 (211)
T ss_dssp CCCEEEEECCCTTTTGGGTTT---SCHHHHHHHHH-HHHHHHHHHHHHTTCSEEEEEESSCTT--CS-----SC------
T ss_pred CceEEEEEeCCCCCccccCcc---CCHHHHHHHHH-HHHHHHHHHHHHcCCceEEEEEcCcHH--HH-----hh------
Confidence 458899999 6667777521 11222225678 999999999999999999 88887642 11 11
Q ss_pred ccCCceEEEecCccCCCCCCCccccchHHHHHHhhhhhcCCCCCCcCeEEEEcCCe-ecccC-hHHHHH
Q 014953 84 TFGDGCVEVLAATQTPGEAGKRWFQGTADAVRQFHWLFEDPRNKVIEDVLILSGDH-LYRMD-YMDFVQ 150 (415)
Q Consensus 84 ~~~~~~v~i~~~~~~~~~~~~~~~~Gt~~al~~~~~~i~~~~~~~~~~~lv~~gD~-i~~~~-l~~~l~ 150 (415)
++ +.++... .|.+.+++.+...+ .+.++++.||+ +...+ +..+++
T Consensus 65 -~~---~~~v~~~-----------~gl~~sl~~a~~~~-------~~~vlvi~~D~P~l~~~~i~~l~~ 111 (211)
T 2i5e_A 65 -TE---ARVLLDE-----------KDLNEALNRYLKEA-------EEPVLIVMADLPLLSPEHIKEISS 111 (211)
T ss_dssp -CS---SEEEECC-----------SCHHHHHHHHHHHC-------CSCEEEECSCCTTCCHHHHHHHTT
T ss_pred -cC---CEEEECC-----------CCHHHHHHHHHHhc-------CCCEEEEcCCcCCCCHHHHHHHHc
Confidence 11 2232211 28899999987655 26899999999 44443 566655
No 171
>1qg8_A Protein (spore coat polysaccharide biosynthesis P SPSA); glycosyltransferase, transferase; 1.50A {Bacillus subtilis} SCOP: c.68.1.1 PDB: 1h7q_A* 1h7l_A 1qgq_A* 1qgs_A*
Probab=88.12 E-value=6.6 Score=34.00 Aligned_cols=100 Identities=13% Similarity=0.165 Sum_probs=63.8
Q ss_pred ceeeCCcceeehhehhhhhccCCc--EEEEEcccChhHHHHHHHhhccCCCCcccCCceEEEecCc--------cCCCCC
Q 014953 33 AVPIGGAYRLIDVPMSNCINSGIN--KVYILTQYNSASLNRHLARAYNYGSGVTFGDGCVEVLAAT--------QTPGEA 102 (415)
Q Consensus 33 llpv~g~~pli~~~l~~l~~~gi~--~I~vv~~~~~~~i~~~l~~~~~~~~~~~~~~~~v~i~~~~--------~~~~~~ 102 (415)
.+|.-|....|..+|+.+.++... +|+||-....+...+.+.+... ...+.++... ..
T Consensus 6 iIp~yn~~~~l~~~l~Sl~~q~~~~~eiivvDd~S~d~t~~~~~~~~~--------~~~i~~i~~~~~~~~~~~~n---- 73 (255)
T 1qg8_A 6 IMTSYNKSDYVAKSISSILSQTFSDFELFIMDDNSNEETLNVIRPFLN--------DNRVRFYQSDISGVKERTEK---- 73 (255)
T ss_dssp EEEESSCTTTHHHHHHHHHTCSCCCEEEEEEECSCCHHHHHHHGGGGG--------STTEEEEECCCCSHHHHHSS----
T ss_pred EEEcCCCHHHHHHHHHHHHhccCCceEEEEEECCCCchHHHHHHHHhh--------cCCEEEEecccccccccccc----
Confidence 456656546788888888765443 5666655444444454433211 1124554433 22
Q ss_pred CCccccchHHHHHHhhhhhcCCCCCCcCeEEEEcCCeecccC-hHHHHHHHHHc
Q 014953 103 GKRWFQGTADAVRQFHWLFEDPRNKVIEDVLILSGDHLYRMD-YMDFVQNHRQS 155 (415)
Q Consensus 103 ~~~~~~Gt~~al~~~~~~i~~~~~~~~~~~lv~~gD~i~~~~-l~~~l~~h~~~ 155 (415)
.|.+.+...++...+ .+.++++.+|.+...+ +..+++.+.+.
T Consensus 74 -----~G~~~a~N~gi~~a~------g~~i~~lD~Dd~~~~~~l~~~~~~~~~~ 116 (255)
T 1qg8_A 74 -----TRYAALINQAIEMAE------GEYITYATDDNIYMPDRLLKMVRELDTH 116 (255)
T ss_dssp -----CHHHHHHHHHHHHCC------CSEEEEEETTEEECTTHHHHHHHHHHHC
T ss_pred -----cCHHHHHHHHHHHcC------CCEEEEeCCCCccChHHHHHHHHHHHhC
Confidence 488888888877654 5899999999988877 78888877765
No 172
>3bcv_A Putative glycosyltransferase protein; protein structure initiative II, PSI-II NYSGXRC, structural genomics; 2.35A {Bacteroides fragilis}
Probab=87.47 E-value=2.6 Score=36.21 Aligned_cols=107 Identities=13% Similarity=0.152 Sum_probs=63.4
Q ss_pred ceeeCCcceeehhehhhhhccCCc--EEEEEcccChhHHHHHHHhhccCCCCcccCCceEEEecCccCCCCCCCccccch
Q 014953 33 AVPIGGAYRLIDVPMSNCINSGIN--KVYILTQYNSASLNRHLARAYNYGSGVTFGDGCVEVLAATQTPGEAGKRWFQGT 110 (415)
Q Consensus 33 llpv~g~~pli~~~l~~l~~~gi~--~I~vv~~~~~~~i~~~l~~~~~~~~~~~~~~~~v~i~~~~~~~~~~~~~~~~Gt 110 (415)
.+|.-|....|..+|+.+.+.... +|+||-....+...+.+.+... .. ..+.++.. +. .|.
T Consensus 10 iIp~yn~~~~l~~~l~Sl~~q~~~~~eiIvvDd~S~d~t~~~~~~~~~-----~~--~~i~~i~~-~n---------~G~ 72 (240)
T 3bcv_A 10 IVPIYNVEKYLDQCVQALLAQTLSDIEIILIDDESPDNCPKICDDYAA-----QY--PNIKVIHK-KN---------AGL 72 (240)
T ss_dssp EEEESSCTTTHHHHHHHHHTCSSSSEEEEEEECCCSSSHHHHHHHHHH-----HC--SSEEEEEC-CC---------CCH
T ss_pred EEecCCCHHHHHHHHHHHHhCcCCCeEEEEEECCCCcCHHHHHHHHHh-----hC--CCEEEEEC-CC---------CCh
Confidence 344445435677777777665433 6666644322222222221100 00 11445532 22 488
Q ss_pred HHHHHHhhhhhcCCCCCCcCeEEEEcCCeecccC-hHHHHHHHHHcCCcEEEE
Q 014953 111 ADAVRQFHWLFEDPRNKVIEDVLILSGDHLYRMD-YMDFVQNHRQSGADITIS 162 (415)
Q Consensus 111 ~~al~~~~~~i~~~~~~~~~~~lv~~gD~i~~~~-l~~~l~~h~~~~~~~ti~ 162 (415)
+.+...++...+ .+.++++.+|.+...+ |..+++...+.+.++.+.
T Consensus 73 ~~a~N~g~~~a~------g~~i~~lD~Dd~~~~~~l~~l~~~~~~~~~~~v~~ 119 (240)
T 3bcv_A 73 GMACNSGLDVAT------GEYVAFCDSDDYVDSDMYMTMYNVAQKYTCDAVFT 119 (240)
T ss_dssp HHHHHHHHHHCC------SSEEEECCTTCCCCTTHHHHHHHHHHHHTCSEEEC
T ss_pred HHHHHHHHHHcC------CCEEEEECCCCcCCHHHHHHHHHHHHhcCCCEEEE
Confidence 999988887764 5899999999988887 788888777766665443
No 173
>3cgx_A Putative nucleotide-diphospho-sugar transferase; YP_389115.1, joint center for structural genomics; 1.90A {Desulfovibrio desulfuricans subsp}
Probab=86.01 E-value=1.6 Score=38.43 Aligned_cols=87 Identities=7% Similarity=-0.019 Sum_probs=56.8
Q ss_pred eeehhehhhhhccCCcEEEEEcccChhHHH--HHHHhhccCCCCcccCCceEEEecCccCCCCCCCccccchHHHHHHhh
Q 014953 41 RLIDVPMSNCINSGINKVYILTQYNSASLN--RHLARAYNYGSGVTFGDGCVEVLAATQTPGEAGKRWFQGTADAVRQFH 118 (415)
Q Consensus 41 pli~~~l~~l~~~gi~~I~vv~~~~~~~i~--~~l~~~~~~~~~~~~~~~~v~i~~~~~~~~~~~~~~~~Gt~~al~~~~ 118 (415)
+|+.++++.+...+...++++++.....+. ..+. +.+ +.+.+ |. ..|.+.++..+.
T Consensus 38 ~ll~~tl~~~~~~~~~~vvvvt~~~~~~~~~~~~~~-----~~~-------~~~~~--q~--------~~gLg~rl~~a~ 95 (242)
T 3cgx_A 38 HFVQDMLQGLARLHADLHICYVPGDADLPEKFKAWL-----GPQ-------HMFAA--QQ--------GLDLGERMKHAM 95 (242)
T ss_dssp HHHHHHHHHHTTSSSEEEEEECCCCTTHHHHHHHHH-----CTT-------SEEEE--CC--------SSSHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCEEEEEcCCchhhhhhhhhhc-----cCC-------cEEec--CC--------CCCHHHHHHHHH
Confidence 799999999999988878777776554432 2221 111 11221 21 148899999888
Q ss_pred hhh-cCCCCCCcCeEEEEcCCe--ecccChHHHHHHHH
Q 014953 119 WLF-EDPRNKVIEDVLILSGDH--LYRMDYMDFVQNHR 153 (415)
Q Consensus 119 ~~i-~~~~~~~~~~~lv~~gD~--i~~~~l~~~l~~h~ 153 (415)
..+ .. ..+.++++.+|+ +...++.++++.+.
T Consensus 96 ~~~~~~----~~~~vliigaD~P~L~~~~l~~a~~~l~ 129 (242)
T 3cgx_A 96 QKAFDD----GYDRVVLMGSDIPDYPCELVQKALNDLQ 129 (242)
T ss_dssp HHHHHT----TCSEEEEECSSCTTCCHHHHHHHHHHTT
T ss_pred HHHHhC----CCCeEEEEcCCCCCCCHHHHHHHHHHhc
Confidence 765 21 147899999999 44556788877554
No 174
>1xhb_A Polypeptide N-acetylgalactosaminyltransferase 1; glycosyltransferase-A (GT-A); HET: NAG BMA; 2.50A {Mus musculus} SCOP: b.42.2.1 c.68.1.17
Probab=72.99 E-value=23 Score=34.06 Aligned_cols=106 Identities=10% Similarity=0.061 Sum_probs=65.3
Q ss_pred ceeeCCcc-eeehhehhhhhccCC----cEEEEEcccChh-HHHHHHHhhccCCCCcccCCceEEEecCccCCCCCCCcc
Q 014953 33 AVPIGGAY-RLIDVPMSNCINSGI----NKVYILTQYNSA-SLNRHLARAYNYGSGVTFGDGCVEVLAATQTPGEAGKRW 106 (415)
Q Consensus 33 llpv~g~~-pli~~~l~~l~~~gi----~~I~vv~~~~~~-~i~~~l~~~~~~~~~~~~~~~~v~i~~~~~~~~~~~~~~ 106 (415)
.+|.-|.. ..|..+|+.+.+.-. .+|+||-....+ ...+.+.+... .+. ..+.++.....
T Consensus 34 IIp~yN~~~~~l~~~l~Sl~~q~~~~~~~EIIvVDd~S~d~~t~~~l~~~~~-----~~~-~~v~vi~~~~n-------- 99 (472)
T 1xhb_A 34 VIVFHNEAWSTLLRTVHSVINRSPRHMIEEIVLVDDASERDFLKRPLESYVK-----KLK-VPVHVIRMEQR-------- 99 (472)
T ss_dssp EEEESSCCHHHHHHHHHHHHHSSCGGGEEEEEEEECSCCCGGGTHHHHHHHH-----SSS-SCEEEEECSSC--------
T ss_pred EEEeCCCCHHHHHHHHHHHHhcCcHhHceEEEEEECCCCcHHHHHHHHHHHH-----HCC-CcEEEEECCCC--------
Confidence 46667764 477788888876532 277777543332 23333322110 011 02555544333
Q ss_pred ccchHHHHHHhhhhhcCCCCCCcCeEEEEcCCeecccC-hHHHHHHHHHcCCcE
Q 014953 107 FQGTADAVRQFHWLFEDPRNKVIEDVLILSGDHLYRMD-YMDFVQNHRQSGADI 159 (415)
Q Consensus 107 ~~Gt~~al~~~~~~i~~~~~~~~~~~lv~~gD~i~~~~-l~~~l~~h~~~~~~~ 159 (415)
.|-+.|...++.... .+.++++.+|.....+ |..+++...+....+
T Consensus 100 -~G~~~a~N~g~~~A~------gd~i~flD~D~~~~p~~L~~ll~~~~~~~~~~ 146 (472)
T 1xhb_A 100 -SGLIRARLKGAAVSR------GQVITFLDAHCECTAGWLEPLLARIKHDRRTV 146 (472)
T ss_dssp -CCHHHHHHHHHHHCC------SSEEEEEESSEEECTTCHHHHHHHHHHCTTEE
T ss_pred -CChHHHHHHHHHhcc------CCeEEEECCCeEeCccHHHHHHHHHHhCCCEE
Confidence 488888888877664 5899999999988777 788888877665443
No 175
>2ffu_A Ppgalnact-2, polypeptide N-acetylgalactosaminyltransferase 2, protein-UDP; ppgalnact, mucin, glycosyltransferase; HET: UDP; 1.64A {Homo sapiens} PDB: 2ffv_A*
Probab=66.26 E-value=24 Score=34.22 Aligned_cols=100 Identities=8% Similarity=0.064 Sum_probs=62.5
Q ss_pred ceeeCCcce-eehhehhhhhccCCc----EEEEEcccCh-hHHHHHHHhhccCCCCcccCCceEEEecCccCCCCCCCcc
Q 014953 33 AVPIGGAYR-LIDVPMSNCINSGIN----KVYILTQYNS-ASLNRHLARAYNYGSGVTFGDGCVEVLAATQTPGEAGKRW 106 (415)
Q Consensus 33 llpv~g~~p-li~~~l~~l~~~gi~----~I~vv~~~~~-~~i~~~l~~~~~~~~~~~~~~~~v~i~~~~~~~~~~~~~~ 106 (415)
.+|.-|... .|..+|+.+.+.-.. +|+||-.... ..+.+.+ ... ..+.++.....
T Consensus 71 IIp~yN~~~~~L~~~l~Sl~~q~~~~~~~EIIvVDDgS~D~t~~~~~-~~~----------~~v~vi~~~~n-------- 131 (501)
T 2ffu_A 71 VITFHNEARSALLRTVVSVLKKSPPHLIKEIILVDDYSNDPEDGALL-GKI----------EKVRVLRNDRR-------- 131 (501)
T ss_dssp EEEESSCCHHHHHHHHHHHHHHSCGGGEEEEEEEECSCSCTHHHHGG-GGB----------TTEEEEECSSC--------
T ss_pred EEEeCcCcHHHHHHHHHHHHhhCchhhceeEEEEECCCCchHHHHHH-hcC----------CCEEEEECCCC--------
Confidence 456666523 677788887664332 6777644322 3332222 111 12555543332
Q ss_pred ccchHHHHHHhhhhhcCCCCCCcCeEEEEcCCeecccC-hHHHHHHHHHcCCc
Q 014953 107 FQGTADAVRQFHWLFEDPRNKVIEDVLILSGDHLYRMD-YMDFVQNHRQSGAD 158 (415)
Q Consensus 107 ~~Gt~~al~~~~~~i~~~~~~~~~~~lv~~gD~i~~~~-l~~~l~~h~~~~~~ 158 (415)
.|.+.|...++...+ .+.++++.+|.....+ |..+++...+....
T Consensus 132 -~G~~~A~N~G~~~A~------gd~i~flD~D~~~~p~~L~~ll~~~~~~~~~ 177 (501)
T 2ffu_A 132 -EGLMRSRVRGADAAQ------AKVLTFLDSHCECNEHWLEPLLERVAEDRTR 177 (501)
T ss_dssp -CHHHHHHHHHHHHCC------SSEEEECCSSEEECTTCHHHHHHHHHHCTTE
T ss_pred -cCHHHHHHHHHHhcC------CCEEEEECCCcccCccHHHHHHHHHHhCCCe
Confidence 488888888887664 5889999999987776 88899888776554
No 176
>2d7i_A Polypeptide N-acetylgalactosaminyltransferase 10; beta trefoil, rossmann fold; HET: NAG NGA UDP; 2.50A {Homo sapiens} PDB: 2d7r_A*
Probab=64.61 E-value=29 Score=34.45 Aligned_cols=103 Identities=9% Similarity=0.124 Sum_probs=62.9
Q ss_pred ceeeCCcc-eeehhehhhhhccCCc----EEEEEcccCh-hHHHHHHHhhccCCCCcccCCceEEEecCccCCCCCCCcc
Q 014953 33 AVPIGGAY-RLIDVPMSNCINSGIN----KVYILTQYNS-ASLNRHLARAYNYGSGVTFGDGCVEVLAATQTPGEAGKRW 106 (415)
Q Consensus 33 llpv~g~~-pli~~~l~~l~~~gi~----~I~vv~~~~~-~~i~~~l~~~~~~~~~~~~~~~~v~i~~~~~~~~~~~~~~ 106 (415)
.+|.-|.. ..|..+|+.+.+.... +|+||-.... ..+.+.+.+... .+ ..+.++.....
T Consensus 117 IIp~yNe~~~~L~~~L~Sll~qt~~~~~~EIIVVDDgS~D~tl~~~l~~~~~-----~~--~~v~vi~~~~n-------- 181 (570)
T 2d7i_A 117 IIPFHNEGWSSLLRTVHSVLNRSPPELVAEIVLVDDFSDREHLKKPLEDYMA-----LF--PSVRILRTKKR-------- 181 (570)
T ss_dssp EEEESSCCHHHHHHHHHHHHHHSCGGGEEEEEEEECSCCCGGGTHHHHHHHT-----TS--TTEEEEECSSC--------
T ss_pred EEEECCCCHHHHHHHHHHHHhcCCccCcEEEEEEECCCCcHHHHHHHHHHHH-----hC--CeEEEEECCCC--------
Confidence 35666763 4677778887764332 6777754322 221333332110 01 12555543332
Q ss_pred ccchHHHHHHhhhhhcCCCCCCcCeEEEEcCCeecccC-hHHHHHHHHHcCC
Q 014953 107 FQGTADAVRQFHWLFEDPRNKVIEDVLILSGDHLYRMD-YMDFVQNHRQSGA 157 (415)
Q Consensus 107 ~~Gt~~al~~~~~~i~~~~~~~~~~~lv~~gD~i~~~~-l~~~l~~h~~~~~ 157 (415)
.|-+.|...++...+ .+.++++.+|.....+ |..+++...+...
T Consensus 182 -~G~~~A~N~G~~~A~------gd~i~fLD~D~~~~p~~L~~ll~~l~~~~~ 226 (570)
T 2d7i_A 182 -EGLIRTRMLGASVAT------GDVITFLDSHCEANVNWLPPLLDRIARNRK 226 (570)
T ss_dssp -CCHHHHHHHHHHHCC------SSEEEECCSSEEECTTCSHHHHHHHHHCTT
T ss_pred -CCHHHHHHHHHHhcC------CCEEEEEcCCccccccHHHHHHHHHHhCCC
Confidence 488999988887664 5899999999988777 7888888776543
No 177
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*
Probab=62.48 E-value=34 Score=34.19 Aligned_cols=104 Identities=8% Similarity=-0.014 Sum_probs=64.1
Q ss_pred ceeeCCcceeehhehhhhhccC---CcEEEEEcccChhHHHHHHHhhccCCCCcccCCceEEEecCccCCCCCCCccccc
Q 014953 33 AVPIGGAYRLIDVPMSNCINSG---INKVYILTQYNSASLNRHLARAYNYGSGVTFGDGCVEVLAATQTPGEAGKRWFQG 109 (415)
Q Consensus 33 llpv~g~~pli~~~l~~l~~~g---i~~I~vv~~~~~~~i~~~l~~~~~~~~~~~~~~~~v~i~~~~~~~~~~~~~~~~G 109 (415)
++|.-|....|..+|+.+.... --+|+||-....+...+.+.+. .. .. .+.++..... -.|
T Consensus 98 iIp~~n~~~~l~~~l~sl~~q~~~~~~eiivvDd~s~d~t~~~~~~~---~~--~~---~i~~i~~~~~--------~~g 161 (625)
T 2z86_A 98 VIPTYNRAKILAITLACLCNQKTIYDYEVIVADDGSKENIEEIVREF---ES--LL---NIKYVRQKDY--------GYQ 161 (625)
T ss_dssp EEEESSCHHHHHHHHHHHHTCCCSSCEEEEEEEESCSSCHHHHHHTT---TT--TS---CEEEEEECCC--------SCC
T ss_pred EEecCCcHHHHHHHHHHHHhhccCCCeEEEEEeCCCchhHHHHHHHh---hh--cC---CeEEEEeCCC--------Ccc
Confidence 4666676467888888887652 3467777654444444444331 11 01 1333332211 135
Q ss_pred hHHHHHHhhhhhcCCCCCCcCeEEEEcCCeecccC-hHHHHHHHHHcCCc
Q 014953 110 TADAVRQFHWLFEDPRNKVIEDVLILSGDHLYRMD-YMDFVQNHRQSGAD 158 (415)
Q Consensus 110 t~~al~~~~~~i~~~~~~~~~~~lv~~gD~i~~~~-l~~~l~~h~~~~~~ 158 (415)
-+.++..++...+ .+.++++.+|.+...+ |..+++.+.+.+..
T Consensus 162 ~~~a~N~g~~~a~------g~~v~~lD~D~~~~~~~l~~~~~~~~~~~~~ 205 (625)
T 2z86_A 162 LCAVRNLGLRAAK------YNYVAILDCDMAPNPLWVQSYMELLAVDDNV 205 (625)
T ss_dssp HHHHHHHHHHHCC------SSEEEEECTTEEECTTHHHHHHHHHHHCTTE
T ss_pred hhHHHHHHHHhCC------cCEEEEECCCCCCCHHHHHHHHHHHhcCCce
Confidence 7888887877654 5899999999988877 68888877665543
No 178
>3ckj_A Putative uncharacterized protein; mycobacteria, unknown function; HET: CIT; 1.80A {Mycobacterium paratuberculosis} PDB: 3ckn_A* 3cko_A* 3ckq_A* 3ckv_A* 3e26_A 3e25_A
Probab=58.14 E-value=55 Score=29.60 Aligned_cols=109 Identities=12% Similarity=0.042 Sum_probs=60.9
Q ss_pred eeeCCcceeehhehhhhhccC---CcEEEEEcccChhHHHHHHHhhccCCCCcccCCceEEEec-CccCCCCCCCccccc
Q 014953 34 VPIGGAYRLIDVPMSNCINSG---INKVYILTQYNSASLNRHLARAYNYGSGVTFGDGCVEVLA-ATQTPGEAGKRWFQG 109 (415)
Q Consensus 34 lpv~g~~pli~~~l~~l~~~g---i~~I~vv~~~~~~~i~~~l~~~~~~~~~~~~~~~~v~i~~-~~~~~~~~~~~~~~G 109 (415)
+|.-|....|..+|+.+.+.- ..+|+||-+...+...+.+.+. .. .+. ..+.++. ... ..|
T Consensus 54 Ip~yN~~~~l~~~l~sl~~q~~~~~~eiivVDdgS~D~t~~~~~~~---~~--~~~-~~~~~~~~~~~---------n~G 118 (329)
T 3ckj_A 54 LPALDEEDTIGSVIDSISPLVDGLVDELIVLDSGSTDDTEIRAVAA---GA--RVV-SREQALPEVPI---------RPG 118 (329)
T ss_dssp EEESSCTTTHHHHHHHHGGGBTTTBSEEEEEECSCCSSHHHHHHHT---TC--EEE-EHHHHCTTSCC---------CCS
T ss_pred EeeCCCHHHHHHHHHHHHHhhCCCCcEEEEEeCCCCchHHHHHHHh---hh--hhc-cceeeeccCCC---------CCC
Confidence 555554356777777776642 2467776543333333333321 10 000 0001110 111 158
Q ss_pred hHHHHHHhhhhhcCCCCCCcCeEEEEcCCee-cccC-hHHHHHHHHH-cCCcEEEEE
Q 014953 110 TADAVRQFHWLFEDPRNKVIEDVLILSGDHL-YRMD-YMDFVQNHRQ-SGADITISC 163 (415)
Q Consensus 110 t~~al~~~~~~i~~~~~~~~~~~lv~~gD~i-~~~~-l~~~l~~h~~-~~~~~ti~~ 163 (415)
-+.++..++...+ .+.++++.+|.. ...+ +..+++...+ .+.+++...
T Consensus 119 ~~~a~n~g~~~a~------gd~i~~lD~D~~~~~p~~l~~l~~~l~~~~~~~~v~g~ 169 (329)
T 3ckj_A 119 KGEALWRSLAASR------GDIVVFVDSDLINPHPMFVPWLVGPLLTGDGVHLVKSF 169 (329)
T ss_dssp HHHHHHHHHHHCC------CSEEEECCTTEESCCTTHHHHHHHHHHSCSSCCEEEEE
T ss_pred HHHHHHHHHHhCC------CCEEEEECCCCCCcChHHHHHHHHHHHhCCCccEEEEE
Confidence 8999988887654 589999999998 7777 7888877544 345554443
No 179
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*
Probab=53.38 E-value=55 Score=32.58 Aligned_cols=101 Identities=17% Similarity=0.142 Sum_probs=61.2
Q ss_pred ceeeCCcceeehhehhhhhccCCc--EEEEEcccChhHHHHHHHhhccCCCCcccCCceEEEecCccCCCCCCCccccch
Q 014953 33 AVPIGGAYRLIDVPMSNCINSGIN--KVYILTQYNSASLNRHLARAYNYGSGVTFGDGCVEVLAATQTPGEAGKRWFQGT 110 (415)
Q Consensus 33 llpv~g~~pli~~~l~~l~~~gi~--~I~vv~~~~~~~i~~~l~~~~~~~~~~~~~~~~v~i~~~~~~~~~~~~~~~~Gt 110 (415)
++|.-|....|..+|+.+.+.... +|+|+-+...+...+.+.+... . . ..+.++. ... .|.
T Consensus 380 ii~~yn~~~~l~~~l~s~~~q~~~~~eiivvdd~S~d~t~~~~~~~~~-~----~--~~i~~~~-~~n---------~G~ 442 (625)
T 2z86_A 380 YIPAYNCSKYIVRCVESALNQTITDLEVCICDDGSTDDTLRILQEHYA-N----H--PRVRFIS-QKN---------KGI 442 (625)
T ss_dssp EEEESSCTTTHHHHHHHHHSSSCCSEEEEEEEESCSSSHHHHHHHHHT-T----C--TTEEEEE-ECC---------CCH
T ss_pred EEeCCCCHHHHHHHHHHHHhCcCCCeEEEEEECcCChhHHHHHHHHHh-h----C--CcEEEEe-CCC---------CCH
Confidence 355556546788888888765432 6666654333333333332210 0 0 1144443 222 488
Q ss_pred HHHHHHhhhhhcCCCCCCcCeEEEEcCCeecccC-hHHHHHHHHHcC
Q 014953 111 ADAVRQFHWLFEDPRNKVIEDVLILSGDHLYRMD-YMDFVQNHRQSG 156 (415)
Q Consensus 111 ~~al~~~~~~i~~~~~~~~~~~lv~~gD~i~~~~-l~~~l~~h~~~~ 156 (415)
+.++..++.... .+.++++.+|.+...+ |..+++.+.+..
T Consensus 443 ~~a~n~g~~~a~------g~~i~~ld~D~~~~~~~l~~~~~~~~~~~ 483 (625)
T 2z86_A 443 GSASNTAVRLCR------GFYIGQLDSDDFLEPDAVELCLDEFRKDL 483 (625)
T ss_dssp HHHHHHHHHHCC------SSEEEECCTTCEECTTHHHHHHHHHHHCT
T ss_pred HHHHHHHHHhcC------CCEEEEECCCcccChhHHHHHHHHHHhCC
Confidence 999988887654 5889999999988877 778887765543
No 180
>3f1y_A Mannosyl-3-phosphoglycerate synthase; GT-A type glycosyltransferase, GT-81, mannosyl-3-phosphoglyc synthase, GDP-mannose, transferas; 2.20A {Rubrobacter xylanophilus} PDB: 3kia_A* 3o3p_A*
Probab=47.80 E-value=55 Score=30.65 Aligned_cols=52 Identities=15% Similarity=0.162 Sum_probs=39.2
Q ss_pred cchHHHHHHhhhhhcCCCCCCcCeEEEEcCCee-cccC-hHHHHHHHHHc-CCcEEEEEEE
Q 014953 108 QGTADAVRQFHWLFEDPRNKVIEDVLILSGDHL-YRMD-YMDFVQNHRQS-GADITISCLP 165 (415)
Q Consensus 108 ~Gt~~al~~~~~~i~~~~~~~~~~~lv~~gD~i-~~~~-l~~~l~~h~~~-~~~~ti~~~~ 165 (415)
.|.+.++..++.... .+.++++.+|.. .+.+ +..+++...+. +++++.....
T Consensus 165 ~G~g~A~n~G~~~A~------gd~i~~lDaD~~~~~p~~L~~l~~~l~~~p~~d~v~G~~~ 219 (387)
T 3f1y_A 165 HGKGDAMWRALSVTR------GDLVLYIDADTRDFRPQLAYGVLGPVLEVPGVRFVKAAYR 219 (387)
T ss_dssp CSHHHHHHHHTTTCC------SSEEEECCTTCSSCCTHHHHTTHHHHHHSTTCCEEEEEEE
T ss_pred CCHHHHHHHHHHhcC------CCEEEEEcCCCCcCCHHHHHHHHHHHHHCCCceEEEEeec
Confidence 589999998877653 588899999998 6766 78888877665 5676666544
No 181
>4fix_A UDP-galactofuranosyl transferase GLFT2; CAZY GT-2 family, glycosyltrans carbohydrate binding, membrane; 2.45A {Mycobacterium tuberculosis} PDB: 4fiy_A*
Probab=39.54 E-value=56 Score=33.04 Aligned_cols=103 Identities=13% Similarity=0.079 Sum_probs=59.5
Q ss_pred eeeCCcceeehhehhhhhcc-----CCcEEEEEcccCh-----hHHHHHHHhhccCCCCcccCCceEEEecCccCCCCCC
Q 014953 34 VPIGGAYRLIDVPMSNCINS-----GINKVYILTQYNS-----ASLNRHLARAYNYGSGVTFGDGCVEVLAATQTPGEAG 103 (415)
Q Consensus 34 lpv~g~~pli~~~l~~l~~~-----gi~~I~vv~~~~~-----~~i~~~l~~~~~~~~~~~~~~~~v~i~~~~~~~~~~~ 103 (415)
+|.-|....|..+|+.+.+. ...+|+||=+... ..+.+.+.... ..+.++... +
T Consensus 186 IptYN~~~~L~~~L~SL~~qt~~~~~~~EIIVVDNgStD~s~~~~~~e~~~~~~----------~~I~vI~~~-N----- 249 (657)
T 4fix_A 186 IPTFNRPADCVNALRELTADPLVDQVIGAVIVPDQGERKVRDHPDFPAAAARLG----------SRLSIHDQP-N----- 249 (657)
T ss_dssp CCBSSCHHHHHHHHHHHTTSHHHHTTEEEEEEEECSSSCGGGSTTHHHHHHHHG----------GGEEEEECC-C-----
T ss_pred EEecCCHHHHHHHHHHHHcCccccCCCCEEEEEECcCCCccchHHHHHHHHhcC----------CCEEEEECC-C-----
Confidence 34445436777788877653 2336766644321 13334433221 124555432 2
Q ss_pred CccccchHHHHHHhhhhhcCCCCCCcCeEEEEcCCeecccC-hHHHHHHHHHcCCc
Q 014953 104 KRWFQGTADAVRQFHWLFEDPRNKVIEDVLILSGDHLYRMD-YMDFVQNHRQSGAD 158 (415)
Q Consensus 104 ~~~~~Gt~~al~~~~~~i~~~~~~~~~~~lv~~gD~i~~~~-l~~~l~~h~~~~~~ 158 (415)
.|-+.+...++...... ...+.+++++.|.+...+ |..+++.+......
T Consensus 250 ----~G~a~a~N~Gl~~A~g~--~~~dyIlfLD~D~~~~pd~L~~ll~~l~~~~~~ 299 (657)
T 4fix_A 250 ----LGGSGGYSRVMYEALKN--TDCQQILFMDDDIRLEPDSILRVLAMHRFAKAP 299 (657)
T ss_dssp ----CHHHHHHHHHHHHHHHH--CCCSEEEEECSSEEECTHHHHHHHHHHHHBSSC
T ss_pred ----CCHHHHHHHHHHHHHhc--CCCCEEEEECCCCccChhHHHHHHHHHHhCCCc
Confidence 47777777666554210 014789999999988877 78888887766443
No 182
>2xvy_A Chelatase, putative; metal binding protein; HET: HEM; 1.70A {Desulfovibrio vulgaris} PDB: 2xvx_A* 2xvz_A*
Probab=38.23 E-value=23 Score=31.24 Aligned_cols=25 Identities=12% Similarity=0.141 Sum_probs=19.3
Q ss_pred CcceeehhehhhhhccCCcEEEEEcc
Q 014953 38 GAYRLIDVPMSNCINSGINKVYILTQ 63 (415)
Q Consensus 38 g~~pli~~~l~~l~~~gi~~I~vv~~ 63 (415)
+. |-+.-.++.|...|+++|+|+--
T Consensus 63 ~~-P~i~~al~~l~~~G~~~ivV~Pl 87 (269)
T 2xvy_A 63 AA-PSPAEALAGMAEEGFTHVAVQSL 87 (269)
T ss_dssp CC-CCHHHHHHHHHHTTCCEEEEEEC
T ss_pred CC-CCHHHHHHHHHHCCCCEEEEEec
Confidence 45 77888888888888888877644
No 183
>4hg6_A Cellulose synthase subunit A; membrane translocation, cellulose synthesis, UDP-GLC binding membrane, transferase; HET: BGC UDP LDA; 3.25A {Rhodobacter sphaeroides}
Probab=32.73 E-value=1.4e+02 Score=31.02 Aligned_cols=42 Identities=17% Similarity=0.115 Sum_probs=33.6
Q ss_pred cchHHHHHHhhhhhcCCCCCCcCeEEEEcCCeecccC-hHHHHHHHHHc
Q 014953 108 QGTADAVRQFHWLFEDPRNKVIEDVLILSGDHLYRMD-YMDFVQNHRQS 155 (415)
Q Consensus 108 ~Gt~~al~~~~~~i~~~~~~~~~~~lv~~gD~i~~~~-l~~~l~~h~~~ 155 (415)
.|-++++..+....+ .+.++++.+|.....+ +..+++...+.
T Consensus 224 ~GKa~alN~gl~~a~------gd~Il~lDaD~~~~pd~L~~lv~~~~~d 266 (802)
T 4hg6_A 224 HAKAGNMSAALERLK------GELVVVFDADHVPSRDFLARTVGYFVED 266 (802)
T ss_dssp SHHHHHHHHHHHHCC------CSEEEECCTTEEECTTHHHHHHHHHHHS
T ss_pred CcchHHHHHHHHhcC------CCEEEEECCCCCcChHHHHHHHHHHhcC
Confidence 478888888887664 5899999999988888 78888877544
No 184
>2nxv_A ATP synthase subunits region ORF 6; majastridin, ATPase operon, glycosyl transferase, rossmann F sulphur SAD, transferase; 1.10A {Rhodobacter blasticus} PDB: 2qgi_A*
Probab=20.76 E-value=3.7e+02 Score=22.64 Aligned_cols=41 Identities=15% Similarity=-0.074 Sum_probs=29.9
Q ss_pred cchHHHHHHhhhhhcCCCCCCcCeEEEEcCCeecccC-hHHHHHHHHH
Q 014953 108 QGTADAVRQFHWLFEDPRNKVIEDVLILSGDHLYRMD-YMDFVQNHRQ 154 (415)
Q Consensus 108 ~Gt~~al~~~~~~i~~~~~~~~~~~lv~~gD~i~~~~-l~~~l~~h~~ 154 (415)
.|.+.+.-.+....+ .+.+++++.|.....+ +.++++...+
T Consensus 60 ~g~a~a~N~Gi~~A~------g~yl~fln~D~~~~~~~l~~l~~~~~~ 101 (249)
T 2nxv_A 60 FHGFSWHKQMLPRCK------GRYVIFCHEDVELVDRGYDDLVAAIEA 101 (249)
T ss_dssp CCTTTHHHHHGGGCC------SSEEEEEETTEECSSCCHHHHHHHHHH
T ss_pred ccHHHHHHHHHHhcC------CCEEEEECCCcccCccHHHHHHHHHHh
Confidence 366666666655443 5899999999988777 7778776655
Done!