BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 014955
(415 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|356519889|ref|XP_003528601.1| PREDICTED: nucleolysin TIAR-like [Glycine max]
Length = 422
Score = 738 bits (1906), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 375/413 (90%), Positives = 392/413 (94%), Gaps = 6/413 (1%)
Query: 1 MQHQRLKQQQQQQQQALMQQALLQQQSLYHPGLLAAPQIEPIPSGNLPPGFDPSTCRSVY 60
MQ+ RLKQQQQQQQQALMQQALLQQQSLYHPGLLA PQIEP PSGNLPPGFDPSTCRSVY
Sbjct: 1 MQNHRLKQQQQQQQQALMQQALLQQQSLYHPGLLAPPQIEPYPSGNLPPGFDPSTCRSVY 60
Query: 61 VGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSSYGFIHYFDRRSAAMAILSLNGRHLF 120
VGNIHTQVTEPLLQEVFS TGPVEGCKLIRKDKSSYGFIHYFDRRSAA+AILSLNGRHLF
Sbjct: 61 VGNIHTQVTEPLLQEVFSGTGPVEGCKLIRKDKSSYGFIHYFDRRSAALAILSLNGRHLF 120
Query: 121 GQPIKVNWAYASGQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTG 180
GQPIKVNWAYASGQREDTSGH+NIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTG
Sbjct: 121 GQPIKVNWAYASGQREDTSGHYNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTG 180
Query: 181 RSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELT 240
RSRGFGFVSFRNQQDAQS+INDLTGKWLGSRQIRCNWATKGAG NE+KQ+SDAKSVVELT
Sbjct: 181 RSRGFGFVSFRNQQDAQSSINDLTGKWLGSRQIRCNWATKGAGGNEEKQNSDAKSVVELT 240
Query: 241 NGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDK 300
NGSSEDGKET+N++APENNPQYTTVYVGNLAPEVTQLDLHRHFH+LGAGV+EEVRVQRDK
Sbjct: 241 NGSSEDGKETSNSDAPENNPQYTTVYVGNLAPEVTQLDLHRHFHALGAGVMEEVRVQRDK 300
Query: 301 GFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSKPTPPGTSSNPLPPPAAAPIP 360
GFGFVRYSTHAEAALAIQMGN S L GK +KCSWGSKPTPPGT+SNPLPPPAAA +P
Sbjct: 301 GFGFVRYSTHAEAALAIQMGNA--QSLLCGKPIKCSWGSKPTPPGTASNPLPPPAAASLP 358
Query: 361 GLSAADLLAYERQIAMSKMGGVHALMHPQAQHPLKQAAMGVGSAGASQAIYDG 413
GLSA DLLAYERQ+A+SKMGGVHALMHPQ QH LKQAA + GASQAIYDG
Sbjct: 359 GLSATDLLAYERQLAISKMGGVHALMHPQGQHHLKQAA----AIGASQAIYDG 407
>gi|356559021|ref|XP_003547800.1| PREDICTED: nucleolysin TIAR-like [Glycine max]
Length = 416
Score = 724 bits (1869), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 360/413 (87%), Positives = 376/413 (91%), Gaps = 12/413 (2%)
Query: 1 MQHQRLKQQQQQQQQALMQQALLQQQSLYHPGLLAAPQIEPIPSGNLPPGFDPSTCRSVY 60
MQ+ RLKQQQQ Q + Q QSLYHPGLLA PQIEPIPSGNLPPGFDPSTCRSVY
Sbjct: 1 MQNHRLKQQQQALMQQALLQQ----QSLYHPGLLAPPQIEPIPSGNLPPGFDPSTCRSVY 56
Query: 61 VGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSSYGFIHYFDRRSAAMAILSLNGRHLF 120
VGNIHTQVTEPLLQEVF+ TGPVE CKLIRKDKSSYGFIHYFDRRSAA+AILSLNGRHLF
Sbjct: 57 VGNIHTQVTEPLLQEVFAGTGPVEACKLIRKDKSSYGFIHYFDRRSAALAILSLNGRHLF 116
Query: 121 GQPIKVNWAYASGQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTG 180
GQPIKVNWAYASGQREDTSGH+NIFVGDLSPEVTDATLFACFSVYP+CSDARVMWDQKTG
Sbjct: 117 GQPIKVNWAYASGQREDTSGHYNIFVGDLSPEVTDATLFACFSVYPTCSDARVMWDQKTG 176
Query: 181 RSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELT 240
RSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAG E+KQ+SDAKSVVELT
Sbjct: 177 RSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGGTEEKQNSDAKSVVELT 236
Query: 241 NGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDK 300
GSS DGKET+N++APENNPQYTTVYVGNLAPE TQLDLH HFHSLGAGVIEEVRVQRDK
Sbjct: 237 YGSS-DGKETSNSDAPENNPQYTTVYVGNLAPEATQLDLHHHFHSLGAGVIEEVRVQRDK 295
Query: 301 GFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSKPTPPGTSSNPLPPPAAAPIP 360
GFGFVRYSTHAEAALAIQMGN S L GKQ+KCSWGSKPTP GT+SNPLPPPAAA +P
Sbjct: 296 GFGFVRYSTHAEAALAIQMGNA--QSLLCGKQIKCSWGSKPTPAGTASNPLPPPAAASLP 353
Query: 361 GLSAADLLAYERQIAMSKMGGVHALMHPQAQHPLKQAAMGVGSAGASQAIYDG 413
GLSA DLL YERQ+AMSKMGGVHALMHPQ QHPLKQAA+ GASQAIYDG
Sbjct: 354 GLSATDLLVYERQLAMSKMGGVHALMHPQGQHPLKQAAI-----GASQAIYDG 401
>gi|224119532|ref|XP_002331184.1| predicted protein [Populus trichocarpa]
gi|222873305|gb|EEF10436.1| predicted protein [Populus trichocarpa]
Length = 426
Score = 716 bits (1847), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 350/385 (90%), Positives = 369/385 (95%), Gaps = 4/385 (1%)
Query: 29 YHPGLLAAPQIEPIPSGNLPPGFDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKL 88
YHPGLLA PQIEPIPSGNLPPGFDPSTCRSVYVGNIHTQVTEPLLQEVF+STGPVEGCKL
Sbjct: 31 YHPGLLA-PQIEPIPSGNLPPGFDPSTCRSVYVGNIHTQVTEPLLQEVFASTGPVEGCKL 89
Query: 89 IRKDKSSYGFIHYFDRRSAAMAILSLNGRHLFGQPIKVNWAYASGQREDTSGHFNIFVGD 148
IRK+KSSYGFIHYFDRR+AA+AILSLNGRHLFGQPIKVNWAYASGQREDTSGHFNIFVGD
Sbjct: 90 IRKEKSSYGFIHYFDRRAAALAILSLNGRHLFGQPIKVNWAYASGQREDTSGHFNIFVGD 149
Query: 149 LSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWL 208
LSPEVTDATL+ACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWL
Sbjct: 150 LSPEVTDATLYACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWL 209
Query: 209 GSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVG 268
GSRQIRCNWA KGA +N+DKQSSD+KSVVELTNG+SED KE TN EAPENNPQYTTVYVG
Sbjct: 210 GSRQIRCNWAAKGASSNDDKQSSDSKSVVELTNGTSEDCKEATNNEAPENNPQYTTVYVG 269
Query: 269 NLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYL 328
NLAPEV Q DLHRHFH+LGAGVIEEVRVQRDKGFGFVR+STHAEAALAIQMGNT L
Sbjct: 270 NLAPEVAQPDLHRHFHALGAGVIEEVRVQRDKGFGFVRFSTHAEAALAIQMGNTQS---L 326
Query: 329 FGKQMKCSWGSKPTPPGTSSNPLPPPAAAPIPGLSAADLLAYERQIAMSKMGGVHALMHP 388
FGKQMKCSWGSKPTPPGTSSNPLPPPAAAP+PGL+A D+LAYERQ+A+SKMGG+HALMHP
Sbjct: 327 FGKQMKCSWGSKPTPPGTSSNPLPPPAAAPLPGLTATDILAYERQLAISKMGGIHALMHP 386
Query: 389 QAQHPLKQAAMGVGSAGASQAIYDG 413
Q QHPLKQA MG+G+AGASQAIYDG
Sbjct: 387 QGQHPLKQATMGMGAAGASQAIYDG 411
>gi|449447926|ref|XP_004141717.1| PREDICTED: nucleolysin TIAR-like [Cucumis sativus]
gi|449480481|ref|XP_004155906.1| PREDICTED: nucleolysin TIAR-like [Cucumis sativus]
Length = 422
Score = 712 bits (1838), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 346/385 (89%), Positives = 368/385 (95%), Gaps = 3/385 (0%)
Query: 29 YHPGLLAAPQIEPIPSGNLPPGFDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKL 88
YHPGLLA PQ+EPIPSGNLPPGFDPSTCRSVYVGN+HTQVTEPLLQEVF STG VE CKL
Sbjct: 26 YHPGLLAHPQLEPIPSGNLPPGFDPSTCRSVYVGNVHTQVTEPLLQEVFGSTGLVESCKL 85
Query: 89 IRKDKSSYGFIHYFDRRSAAMAILSLNGRHLFGQPIKVNWAYASGQREDTSGHFNIFVGD 148
+RK+KSSYGFIHYFDRRSAAMAILSLNGRHLFGQPIKVNWAYASGQREDTSGHFNIFVGD
Sbjct: 86 VRKEKSSYGFIHYFDRRSAAMAILSLNGRHLFGQPIKVNWAYASGQREDTSGHFNIFVGD 145
Query: 149 LSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWL 208
LSPEVTD+TLFACFSV+ SCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWL
Sbjct: 146 LSPEVTDSTLFACFSVFSSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWL 205
Query: 209 GSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVG 268
GSRQIRCNWATKGAG+N+DKQSSD KS+ ELTNGSSEDGKET +++APENNPQYTTVYVG
Sbjct: 206 GSRQIRCNWATKGAGSNDDKQSSDVKSIAELTNGSSEDGKETVSSDAPENNPQYTTVYVG 265
Query: 269 NLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYL 328
NLAPE TQ+DLHRHFHSLGAGVIEEVR+QRDKGFGFVRYSTHAEAALAIQMGNT S+L
Sbjct: 266 NLAPEATQVDLHRHFHSLGAGVIEEVRIQRDKGFGFVRYSTHAEAALAIQMGNT--QSFL 323
Query: 329 FGKQMKCSWGSKPTPPGTSSNPLPPPAAAPIPGLSAADLLAYERQIAMSKMGGVHALMHP 388
GKQ+KCSWGSKPTPPGT SNPLPPPAAAP+ GLS +DLLAYERQ+AMSKMGGVHALMHP
Sbjct: 324 CGKQIKCSWGSKPTPPGTISNPLPPPAAAPM-GLSTSDLLAYERQLAMSKMGGVHALMHP 382
Query: 389 QAQHPLKQAAMGVGSAGASQAIYDG 413
QA HPLKQAAMG+G+AG+SQAIYDG
Sbjct: 383 QAPHPLKQAAMGMGAAGSSQAIYDG 407
>gi|255576617|ref|XP_002529199.1| nucleolysin tia-1, putative [Ricinus communis]
gi|223531377|gb|EEF33213.1| nucleolysin tia-1, putative [Ricinus communis]
Length = 422
Score = 711 bits (1834), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 358/387 (92%), Positives = 373/387 (96%), Gaps = 2/387 (0%)
Query: 27 SLYHPGLLAAPQIEPIPSGNLPPGFDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGC 86
SLYHPGLLA PQIEPIPSGNLPPGFDPSTCRSVYVGNIHTQVTEPLLQEVF+STGPVE C
Sbjct: 23 SLYHPGLLAPPQIEPIPSGNLPPGFDPSTCRSVYVGNIHTQVTEPLLQEVFASTGPVESC 82
Query: 87 KLIRKDKSSYGFIHYFDRRSAAMAILSLNGRHLFGQPIKVNWAYASGQREDTSGHFNIFV 146
KLIRK+KSSYGFIHYFDRRSAA+AILSLNGRHLFGQPIKVNWAYASGQREDTSGH+NIFV
Sbjct: 83 KLIRKEKSSYGFIHYFDRRSAALAILSLNGRHLFGQPIKVNWAYASGQREDTSGHYNIFV 142
Query: 147 GDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGK 206
GDLSPEVTDATLFACFSVY SCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGK
Sbjct: 143 GDLSPEVTDATLFACFSVYHSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGK 202
Query: 207 WLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVY 266
WLGSRQIRCNWATKGA +N+DKQSSDAKSVVELTNGSSE+GKET N +APENNPQYTTVY
Sbjct: 203 WLGSRQIRCNWATKGATSNDDKQSSDAKSVVELTNGSSEEGKETANNDAPENNPQYTTVY 262
Query: 267 VGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSS 326
VGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVR+STHAEAALAIQMGNT S
Sbjct: 263 VGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRFSTHAEAALAIQMGNT--QS 320
Query: 327 YLFGKQMKCSWGSKPTPPGTSSNPLPPPAAAPIPGLSAADLLAYERQIAMSKMGGVHALM 386
L+GKQ+KCSWGSKPTPPGTSSNPLPPPAAAP+PGLSA DLL YERQ+AM KMGGVHALM
Sbjct: 321 ILYGKQIKCSWGSKPTPPGTSSNPLPPPAAAPLPGLSATDLLTYERQLAMGKMGGVHALM 380
Query: 387 HPQAQHPLKQAAMGVGSAGASQAIYDG 413
HPQ QHPLKQAAMG+G+AGASQAIYDG
Sbjct: 381 HPQGQHPLKQAAMGMGAAGASQAIYDG 407
>gi|225442061|ref|XP_002270823.1| PREDICTED: nucleolysin TIAR [Vitis vinifera]
Length = 420
Score = 698 bits (1802), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 354/387 (91%), Positives = 371/387 (95%), Gaps = 4/387 (1%)
Query: 27 SLYHPGLLAAPQIEPIPSGNLPPGFDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGC 86
SLYHPGLLA PQIEPIPSGNLPPGFD STCRSVYVGNIHTQV+EPLLQEVF+STGPVEGC
Sbjct: 23 SLYHPGLLAPPQIEPIPSGNLPPGFDSSTCRSVYVGNIHTQVSEPLLQEVFASTGPVEGC 82
Query: 87 KLIRKDKSSYGFIHYFDRRSAAMAILSLNGRHLFGQPIKVNWAYASGQREDTSGHFNIFV 146
KL+RK+KSSYGFIHYFDRRSAA+AILSLNGRHLFGQPIKVNWAYASGQREDTSGHFNIFV
Sbjct: 83 KLVRKEKSSYGFIHYFDRRSAALAILSLNGRHLFGQPIKVNWAYASGQREDTSGHFNIFV 142
Query: 147 GDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGK 206
GDLSPEVTDATLFACFSV+PSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAIND+TGK
Sbjct: 143 GDLSPEVTDATLFACFSVFPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDITGK 202
Query: 207 WLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVY 266
WLGSRQIRCNWATKGAG+N+DKQSSDAKSVVELTNGSSEDGKET EAP+NNPQYTTVY
Sbjct: 203 WLGSRQIRCNWATKGAGSNDDKQSSDAKSVVELTNGSSEDGKETATNEAPDNNPQYTTVY 262
Query: 267 VGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSS 326
VGNLAPEVTQLDLHRHFH+ GAGVIEEVRVQRDKGFGFVRY+THAEAALAIQMGNT S
Sbjct: 263 VGNLAPEVTQLDLHRHFHTFGAGVIEEVRVQRDKGFGFVRYNTHAEAALAIQMGNT--QS 320
Query: 327 YLFGKQMKCSWGSKPTPPGTSSNPLPPPAAAPIPGLSAADLLAYERQIAMSKMGGVHALM 386
L GK +KCSWGSKPTPPGTSSNPLPPPAAAP+PGLSA DLLAYERQ+AMSKMG HALM
Sbjct: 321 ILCGKPIKCSWGSKPTPPGTSSNPLPPPAAAPLPGLSATDLLAYERQLAMSKMG--HALM 378
Query: 387 HPQAQHPLKQAAMGVGSAGASQAIYDG 413
HPQ QHPLKQAAMG+G+AGASQAIYDG
Sbjct: 379 HPQGQHPLKQAAMGMGAAGASQAIYDG 405
>gi|224073594|ref|XP_002304117.1| predicted protein [Populus trichocarpa]
gi|222841549|gb|EEE79096.1| predicted protein [Populus trichocarpa]
Length = 421
Score = 696 bits (1797), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 345/387 (89%), Positives = 365/387 (94%), Gaps = 3/387 (0%)
Query: 27 SLYHPGLLAAPQIEPIPSGNLPPGFDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGC 86
S+YHPGLLA PQIEPIPSGNLPPGFDPSTCRSVYVGNIHTQVTEPLLQEVF+STGPVEGC
Sbjct: 23 SIYHPGLLAPPQIEPIPSGNLPPGFDPSTCRSVYVGNIHTQVTEPLLQEVFASTGPVEGC 82
Query: 87 KLIRKDKSSYGFIHYFDRRSAAMAILSLNGRHLFGQPIKVNWAYASGQREDTSGHFNIFV 146
KLIRK+KSSYGFIHYFDRR+AA+AILSLNGRHLFGQPIKVNWAYASGQREDTSGHFNIFV
Sbjct: 83 KLIRKEKSSYGFIHYFDRRAAALAILSLNGRHLFGQPIKVNWAYASGQREDTSGHFNIFV 142
Query: 147 GDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGK 206
GDLSPEVTDATL+ACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGK
Sbjct: 143 GDLSPEVTDATLYACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGK 202
Query: 207 WLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVY 266
WLGSRQIRCNWA+KGAG+NEDKQSSD+KSVVELT G+SEDG E N EAPENNPQYTTVY
Sbjct: 203 WLGSRQIRCNWASKGAGSNEDKQSSDSKSVVELTIGTSEDGMEAPNNEAPENNPQYTTVY 262
Query: 267 VGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSS 326
VGNL+PEVTQ LHRHFH LGAGVIEEVRVQRDKGFGFVR+STHAEAA+AIQMGN S
Sbjct: 263 VGNLSPEVTQPVLHRHFHVLGAGVIEEVRVQRDKGFGFVRFSTHAEAAVAIQMGNA--QS 320
Query: 327 YLFGKQMKCSWGSKPTPPGTSSNPLPPPAAAPIPGLSAADLLAYERQIAMSKMGGVHALM 386
L GKQ+KCSWGSKPTPPGTSSNPLPPPAAAP+PG+SA D+LAYERQ+A+SKMGGVHA M
Sbjct: 321 LLCGKQIKCSWGSKPTPPGTSSNPLPPPAAAPLPGISATDILAYERQLALSKMGGVHAFM 380
Query: 387 HPQAQHPLKQAAMGVGSAGASQAIYDG 413
P Q PLKQAAMG+G AGASQAIYDG
Sbjct: 381 PPHGQLPLKQAAMGMG-AGASQAIYDG 406
>gi|449453379|ref|XP_004144435.1| PREDICTED: nucleolysin TIAR-like [Cucumis sativus]
Length = 422
Score = 696 bits (1795), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 336/388 (86%), Positives = 359/388 (92%), Gaps = 3/388 (0%)
Query: 27 SLYHPGLLAAPQIEPIPSGNLPPGFDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGC 86
SLYHPGLLA PQIEPIPSGNLPPGFD STCRSVYVGNIH QVTEPLLQEVF S GPVEGC
Sbjct: 23 SLYHPGLLAPPQIEPIPSGNLPPGFDASTCRSVYVGNIHIQVTEPLLQEVFGSIGPVEGC 82
Query: 87 KLIRKDKSSYGFIHYFDRRSAAMAILSLNGRHLFGQPIKVNWAYASGQREDTSGHFNIFV 146
KL+RK+KSSYGF+HYFDRRSAA+AILSLNGRHLFGQPIKVNWAYAS QREDTSGHFNIFV
Sbjct: 83 KLVRKEKSSYGFVHYFDRRSAALAILSLNGRHLFGQPIKVNWAYASSQREDTSGHFNIFV 142
Query: 147 GDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGK 206
GDLSPEVTDA LFACFS Y SCSDARVMWDQKTGRSRGFGFVSFRNQQ+AQ+AINDLTGK
Sbjct: 143 GDLSPEVTDAMLFACFSAYSSCSDARVMWDQKTGRSRGFGFVSFRNQQEAQNAINDLTGK 202
Query: 207 WLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVY 266
WLGSRQIRCNWA KGAG NEDKQ SD KSVVEL+NGSSEDGKE+ N +APENN QYTTVY
Sbjct: 203 WLGSRQIRCNWAAKGAGVNEDKQGSDTKSVVELSNGSSEDGKESVNNDAPENNLQYTTVY 262
Query: 267 VGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSS 326
VGNLAPEV+QLDLHRHFHSLGAGVIEEVR+QRDKGFGFVRY+THAEAALAIQMGNT S
Sbjct: 263 VGNLAPEVSQLDLHRHFHSLGAGVIEEVRIQRDKGFGFVRYNTHAEAALAIQMGNT--RS 320
Query: 327 YLFGKQMKCSWGSKPTPPGTSSNPLPPPAAAPIPGLSAADLLAYERQIAMSKMGGVH-AL 385
+L G+Q+KCSWGSKPTPPGT+SNPLP PA A PGLSAADLLAYERQ+A++KMGGVH AL
Sbjct: 321 FLCGRQIKCSWGSKPTPPGTTSNPLPLPAVASTPGLSAADLLAYERQLAITKMGGVHAAL 380
Query: 386 MHPQAQHPLKQAAMGVGSAGASQAIYDG 413
MHPQ HP+KQA MG+G+A ASQA+YDG
Sbjct: 381 MHPQGPHPMKQAPMGMGAAAASQALYDG 408
>gi|297742974|emb|CBI35841.3| unnamed protein product [Vitis vinifera]
Length = 407
Score = 695 bits (1793), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 352/385 (91%), Positives = 369/385 (95%), Gaps = 4/385 (1%)
Query: 29 YHPGLLAAPQIEPIPSGNLPPGFDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKL 88
YHPGLLA PQIEPIPSGNLPPGFD STCRSVYVGNIHTQV+EPLLQEVF+STGPVEGCKL
Sbjct: 12 YHPGLLAPPQIEPIPSGNLPPGFDSSTCRSVYVGNIHTQVSEPLLQEVFASTGPVEGCKL 71
Query: 89 IRKDKSSYGFIHYFDRRSAAMAILSLNGRHLFGQPIKVNWAYASGQREDTSGHFNIFVGD 148
+RK+KSSYGFIHYFDRRSAA+AILSLNGRHLFGQPIKVNWAYASGQREDTSGHFNIFVGD
Sbjct: 72 VRKEKSSYGFIHYFDRRSAALAILSLNGRHLFGQPIKVNWAYASGQREDTSGHFNIFVGD 131
Query: 149 LSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWL 208
LSPEVTDATLFACFSV+PSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAIND+TGKWL
Sbjct: 132 LSPEVTDATLFACFSVFPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDITGKWL 191
Query: 209 GSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVG 268
GSRQIRCNWATKGAG+N+DKQSSDAKSVVELTNGSSEDGKET EAP+NNPQYTTVYVG
Sbjct: 192 GSRQIRCNWATKGAGSNDDKQSSDAKSVVELTNGSSEDGKETATNEAPDNNPQYTTVYVG 251
Query: 269 NLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYL 328
NLAPEVTQLDLHRHFH+ GAGVIEEVRVQRDKGFGFVRY+THAEAALAIQMGNT S L
Sbjct: 252 NLAPEVTQLDLHRHFHTFGAGVIEEVRVQRDKGFGFVRYNTHAEAALAIQMGNT--QSIL 309
Query: 329 FGKQMKCSWGSKPTPPGTSSNPLPPPAAAPIPGLSAADLLAYERQIAMSKMGGVHALMHP 388
GK +KCSWGSKPTPPGTSSNPLPPPAAAP+PGLSA DLLAYERQ+AMSKMG HALMHP
Sbjct: 310 CGKPIKCSWGSKPTPPGTSSNPLPPPAAAPLPGLSATDLLAYERQLAMSKMG--HALMHP 367
Query: 389 QAQHPLKQAAMGVGSAGASQAIYDG 413
Q QHPLKQAAMG+G+AGASQAIYDG
Sbjct: 368 QGQHPLKQAAMGMGAAGASQAIYDG 392
>gi|147797981|emb|CAN65009.1| hypothetical protein VITISV_027348 [Vitis vinifera]
Length = 420
Score = 695 bits (1793), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 353/387 (91%), Positives = 370/387 (95%), Gaps = 4/387 (1%)
Query: 27 SLYHPGLLAAPQIEPIPSGNLPPGFDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGC 86
SLYHPGLLA PQIEPIPSGNLPPGFD STCRSVYVGNIHTQV+EPLLQEVF+STGPVEGC
Sbjct: 23 SLYHPGLLAPPQIEPIPSGNLPPGFDSSTCRSVYVGNIHTQVSEPLLQEVFASTGPVEGC 82
Query: 87 KLIRKDKSSYGFIHYFDRRSAAMAILSLNGRHLFGQPIKVNWAYASGQREDTSGHFNIFV 146
KL+RK+KSSYGFIHYFDRRSAA+AILSLNGRHLFGQPIKVNWAYASGQREDTSGHFNIFV
Sbjct: 83 KLVRKEKSSYGFIHYFDRRSAALAILSLNGRHLFGQPIKVNWAYASGQREDTSGHFNIFV 142
Query: 147 GDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGK 206
GDLSPEVTDATLFACFSV+PSCSDARVMWDQKTGRSRGFGFVSFRNQQ AQSAIND+TGK
Sbjct: 143 GDLSPEVTDATLFACFSVFPSCSDARVMWDQKTGRSRGFGFVSFRNQQVAQSAINDITGK 202
Query: 207 WLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVY 266
WLGSRQIRCNWATKGAG+N+DKQSSDAKSVVELTNGSSEDGKET EAP+NNPQYTTVY
Sbjct: 203 WLGSRQIRCNWATKGAGSNDDKQSSDAKSVVELTNGSSEDGKETATNEAPDNNPQYTTVY 262
Query: 267 VGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSS 326
VGNLAPEVTQLDLHRHFH+ GAGVIEEVRVQRDKGFGFVRY+THAEAALAIQMGNT S
Sbjct: 263 VGNLAPEVTQLDLHRHFHTFGAGVIEEVRVQRDKGFGFVRYNTHAEAALAIQMGNT--QS 320
Query: 327 YLFGKQMKCSWGSKPTPPGTSSNPLPPPAAAPIPGLSAADLLAYERQIAMSKMGGVHALM 386
L GK +KCSWGSKPTPPGTSSNPLPPPAAAP+PGLSA DLLAYERQ+AMSKMG HALM
Sbjct: 321 ILCGKPIKCSWGSKPTPPGTSSNPLPPPAAAPLPGLSATDLLAYERQLAMSKMG--HALM 378
Query: 387 HPQAQHPLKQAAMGVGSAGASQAIYDG 413
HPQ QHPLKQAAMG+G+AGASQAIYDG
Sbjct: 379 HPQGQHPLKQAAMGMGAAGASQAIYDG 405
>gi|217074564|gb|ACJ85642.1| unknown [Medicago truncatula]
gi|388521359|gb|AFK48741.1| unknown [Medicago truncatula]
Length = 407
Score = 694 bits (1792), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 345/393 (87%), Positives = 365/393 (92%), Gaps = 8/393 (2%)
Query: 22 LLQQQSLYHPGLLAAPQIEPIPSGNLPPGFDPSTCRSVYVGNIHTQVTEPLLQEVFSSTG 81
+ QQQSLYHPGLLA PQIEPIPSGNLPPGFDPSTCRSVYVGN+HTQVTEPLLQEVF+ TG
Sbjct: 7 MKQQQSLYHPGLLAPPQIEPIPSGNLPPGFDPSTCRSVYVGNVHTQVTEPLLQEVFAGTG 66
Query: 82 PVEGCKLIRKDKSSYGFIHYFDRRSAAMAILSLNGRHLFGQPIKVNWAYASGQREDTSGH 141
PVEGCKL RK+KSSYGFIHYFDRRSAA+AIL+LNGRHLFGQPIKVNWAYASGQREDTSGH
Sbjct: 67 PVEGCKLFRKEKSSYGFIHYFDRRSAALAILTLNGRHLFGQPIKVNWAYASGQREDTSGH 126
Query: 142 FNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAIN 201
+NIFVGDLSPEVTDATLFACFSVY SCSDARVMWDQKTGRSRGFGFVSFR+QQDAQSAIN
Sbjct: 127 YNIFVGDLSPEVTDATLFACFSVYQSCSDARVMWDQKTGRSRGFGFVSFRSQQDAQSAIN 186
Query: 202 DLTGKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQ 261
DLTGKWLGSRQIRCNWATK AG E+KQ+SD+KSVVELTNGSSEDGKE + + PENNPQ
Sbjct: 187 DLTGKWLGSRQIRCNWATKVAGGIEEKQNSDSKSVVELTNGSSEDGKEISGNDVPENNPQ 246
Query: 262 YTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGN 321
YTTVYVGNL E TQLDLHRHFH+LGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGN
Sbjct: 247 YTTVYVGNLGSEATQLDLHRHFHALGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGN 306
Query: 322 TTQSSYLFGKQMKCSWGSKPTPPGTSSNPLPPPAAAPIPGLSAADLLAYERQIAMSKMGG 381
SYL GK +KCSWGSKPTPPGT+SNPLPPPAAAP+PGLSA D+LAYERQ+AMSKMGG
Sbjct: 307 A--QSYLCGKIIKCSWGSKPTPPGTASNPLPPPAAAPLPGLSATDILAYERQLAMSKMGG 364
Query: 382 VH-ALMHPQAQHPLKQAAMGVGSAGASQAIYDG 413
VH ALMHPQAQHPLKQAA+ GASQAIYDG
Sbjct: 365 VHAALMHPQAQHPLKQAAI-----GASQAIYDG 392
>gi|225444659|ref|XP_002277008.1| PREDICTED: nucleolysin TIAR isoform 2 [Vitis vinifera]
Length = 426
Score = 682 bits (1761), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 325/389 (83%), Positives = 352/389 (90%), Gaps = 7/389 (1%)
Query: 29 YHPGLLAAPQIEPIPSGNLPPGFDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKL 88
+HPGLLA PQIEPI SGNLPPGFD STCRSVYVGNIH QVTEPLLQEVFSSTGP+EGCKL
Sbjct: 26 HHPGLLAPPQIEPILSGNLPPGFDSSTCRSVYVGNIHPQVTEPLLQEVFSSTGPLEGCKL 85
Query: 89 IRKDKSSYGFIHYFDRRSAAMAILSLNGRHLFGQPIKVNWAYASGQREDTSGHFNIFVGD 148
IRK+KSSYGF+ YFDRRSAA++I++LNGRHLFGQPIKVNWAYAS QREDTSGH+NIFVGD
Sbjct: 86 IRKEKSSYGFVDYFDRRSAALSIVTLNGRHLFGQPIKVNWAYASSQREDTSGHYNIFVGD 145
Query: 149 LSPEVTDATLFACFSVYPSCS----DARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLT 204
LSPEVTDATLFACFSVYPSCS DARVMWDQKTGRSRGFGFVSFRNQQ+AQSAINDL
Sbjct: 146 LSPEVTDATLFACFSVYPSCSSGIRDARVMWDQKTGRSRGFGFVSFRNQQEAQSAINDLN 205
Query: 205 GKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTT 264
G+WLGSRQIRCNWATKGAG NEDK +SDAKSVVELTNG+SEDGK+ +N EAPENN QYTT
Sbjct: 206 GRWLGSRQIRCNWATKGAGGNEDKPNSDAKSVVELTNGTSEDGKDKSNDEAPENNLQYTT 265
Query: 265 VYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQ 324
VYVGNLAPEVT +DLHRHFH+LGAG IE+VRVQRDKGFGFVRYSTHAEAALAIQMGN
Sbjct: 266 VYVGNLAPEVTSVDLHRHFHALGAGAIEDVRVQRDKGFGFVRYSTHAEAALAIQMGN--- 322
Query: 325 SSYLFGKQMKCSWGSKPTPPGTSSNPLPPPAAAPIPGLSAADLLAYERQIAMSKMGGVHA 384
+ L GK +KCSWGSKPTP GTSS PLPPPAA +PG+SAAD AYERQ+A+SKMGG
Sbjct: 323 ARILCGKPIKCSWGSKPTPAGTSSTPLPPPAAPHMPGISAADFAAYERQMALSKMGGAQG 382
Query: 385 LMHPQAQHPLKQAAMGVGSAGASQAIYDG 413
LMHPQAQH LKQ AMG+G+ G+SQAIYDG
Sbjct: 383 LMHPQAQHALKQTAMGMGAGGSSQAIYDG 411
>gi|297850132|ref|XP_002892947.1| hypothetical protein ARALYDRAFT_889143 [Arabidopsis lyrata subsp.
lyrata]
gi|297338789|gb|EFH69206.1| hypothetical protein ARALYDRAFT_889143 [Arabidopsis lyrata subsp.
lyrata]
Length = 419
Score = 681 bits (1756), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 337/388 (86%), Positives = 360/388 (92%), Gaps = 5/388 (1%)
Query: 27 SLYHPGLLAAPQIEPIPSGNLPPGFDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGC 86
SLYHPGLLA PQIEPIPSGNLPPGFDPSTCRSVYVGNIH QVTEPLLQEVF+STGPVE C
Sbjct: 24 SLYHPGLLAPPQIEPIPSGNLPPGFDPSTCRSVYVGNIHIQVTEPLLQEVFASTGPVESC 83
Query: 87 KLIRKDKSSYGFIHYFDRRSAAMAILSLNGRHLFGQPIKVNWAYASGQREDTSGHFNIFV 146
KLIRK+KSSYGF+HYFDRRSA +AILSLNGRHLFGQPIKVNWAYASGQREDTS HFNIFV
Sbjct: 84 KLIRKEKSSYGFVHYFDRRSAGLAILSLNGRHLFGQPIKVNWAYASGQREDTSSHFNIFV 143
Query: 147 GDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGK 206
GDLSPEVTDA LF CFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQ+AI+++TGK
Sbjct: 144 GDLSPEVTDAMLFNCFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQTAIDEITGK 203
Query: 207 WLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVY 266
WLGSRQIRCNWATKGA + EDKQSSD+KSVVELT+G SEDGK+TTN EAPENN QYTTVY
Sbjct: 204 WLGSRQIRCNWATKGATSGEDKQSSDSKSVVELTSGVSEDGKDTTNGEAPENNAQYTTVY 263
Query: 267 VGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSS 326
VGNLAPEV+Q+DLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTH EAALAI MGNT S
Sbjct: 264 VGNLAPEVSQVDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHVEAALAISMGNT--HS 321
Query: 327 YLFGKQMKCSWGSKPTPPGTSSNPLPPPAAAPIPGLSAADLLAYERQIAMSKMGGVHALM 386
YL G+QMKCSWGSKPTPPGT+SNPLPPPA APIPG SA+DLLAYERQ+AMSKM G++ LM
Sbjct: 322 YLSGRQMKCSWGSKPTPPGTASNPLPPPAPAPIPGFSASDLLAYERQLAMSKMAGMNPLM 381
Query: 387 -HPQAQHPLKQAAMGVGSAGASQAIYDG 413
HPQ QH LKQAAM G+ G++QAIYDG
Sbjct: 382 HHPQGQHALKQAAM--GATGSNQAIYDG 407
>gi|225444661|ref|XP_002276983.1| PREDICTED: nucleolysin TIAR isoform 1 [Vitis vinifera]
Length = 429
Score = 678 bits (1749), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 323/392 (82%), Positives = 352/392 (89%), Gaps = 10/392 (2%)
Query: 29 YHPGLLAAPQIEPIPSGNLPPGFDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKL 88
+HPGLLA PQIEPI SGNLPPGFD STCRSVYVGNIH QVTEPLLQEVFSSTGP+EGCKL
Sbjct: 26 HHPGLLAPPQIEPILSGNLPPGFDSSTCRSVYVGNIHPQVTEPLLQEVFSSTGPLEGCKL 85
Query: 89 IRKDKSSYGFIHYFDRRSAAMAILSLNGRHLFGQPIKVNWAYASGQREDTSGHFNIFVGD 148
IRK+KSSYGF+ YFDRRSAA++I++LNGRHLFGQPIKVNWAYAS QREDTSGH+NIFVGD
Sbjct: 86 IRKEKSSYGFVDYFDRRSAALSIVTLNGRHLFGQPIKVNWAYASSQREDTSGHYNIFVGD 145
Query: 149 LSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWL 208
LSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQ+AQSAINDL G+WL
Sbjct: 146 LSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQEAQSAINDLNGRWL 205
Query: 209 GSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSS-------EDGKETTNTEAPENNPQ 261
GSRQIRCNWATKGAG NEDK +SDAKSVVELTNG+S ++GK+ +N EAPENN Q
Sbjct: 206 GSRQIRCNWATKGAGGNEDKPNSDAKSVVELTNGTSGEVIYGIQNGKDKSNDEAPENNLQ 265
Query: 262 YTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGN 321
YTTVYVGNLAPEVT +DLHRHFH+LGAG IE+VRVQRDKGFGFVRYSTHAEAALAIQMGN
Sbjct: 266 YTTVYVGNLAPEVTSVDLHRHFHALGAGAIEDVRVQRDKGFGFVRYSTHAEAALAIQMGN 325
Query: 322 TTQSSYLFGKQMKCSWGSKPTPPGTSSNPLPPPAAAPIPGLSAADLLAYERQIAMSKMGG 381
+ L GK +KCSWGSKPTP GTSS PLPPPAA +PG+SAAD AYERQ+A+SKMGG
Sbjct: 326 ---ARILCGKPIKCSWGSKPTPAGTSSTPLPPPAAPHMPGISAADFAAYERQMALSKMGG 382
Query: 382 VHALMHPQAQHPLKQAAMGVGSAGASQAIYDG 413
LMHPQAQH LKQ AMG+G+ G+SQAIYDG
Sbjct: 383 AQGLMHPQAQHALKQTAMGMGAGGSSQAIYDG 414
>gi|18394471|ref|NP_564018.1| oligouridylate binding protein 1B [Arabidopsis thaliana]
gi|9665134|gb|AAF97318.1|AC007843_21 Putative RNA binding protein [Arabidopsis thaliana]
gi|21553830|gb|AAM62923.1| oligouridylate binding protein, putative [Arabidopsis thaliana]
gi|111074422|gb|ABH04584.1| At1g17370 [Arabidopsis thaliana]
gi|332191458|gb|AEE29579.1| oligouridylate binding protein 1B [Arabidopsis thaliana]
Length = 419
Score = 677 bits (1747), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 333/388 (85%), Positives = 358/388 (92%), Gaps = 5/388 (1%)
Query: 27 SLYHPGLLAAPQIEPIPSGNLPPGFDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGC 86
SLYHPGLLA PQIEPIPSGNLPPGFDPSTCRSVYVGNIH QVTEPLLQEVF+ TGPVE C
Sbjct: 24 SLYHPGLLAPPQIEPIPSGNLPPGFDPSTCRSVYVGNIHIQVTEPLLQEVFAGTGPVESC 83
Query: 87 KLIRKDKSSYGFIHYFDRRSAAMAILSLNGRHLFGQPIKVNWAYASGQREDTSGHFNIFV 146
KLIRK+KSSYGF+HYFDRRSA +AILSLNGRHLFGQPIKVNWAYASGQREDTS HFNIFV
Sbjct: 84 KLIRKEKSSYGFVHYFDRRSAGLAILSLNGRHLFGQPIKVNWAYASGQREDTSSHFNIFV 143
Query: 147 GDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGK 206
GDLSPEVTDA LF CFSVYP+CSDARVMWDQKTGRSRGFGFVSFRNQQDAQ+AI+++TGK
Sbjct: 144 GDLSPEVTDAMLFTCFSVYPTCSDARVMWDQKTGRSRGFGFVSFRNQQDAQTAIDEITGK 203
Query: 207 WLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVY 266
WLGSRQIRCNWATKGA + EDKQSSD+KSVVELT+G SEDGK+TTN EAPENN QYTTVY
Sbjct: 204 WLGSRQIRCNWATKGATSGEDKQSSDSKSVVELTSGVSEDGKDTTNGEAPENNAQYTTVY 263
Query: 267 VGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSS 326
VGNLAPEV+Q+DLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTH EAALAIQMGNT S
Sbjct: 264 VGNLAPEVSQVDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHVEAALAIQMGNT--HS 321
Query: 327 YLFGKQMKCSWGSKPTPPGTSSNPLPPPAAAPIPGLSAADLLAYERQIAMSKMGGVHALM 386
YL G+QMKCSWGSKPTP GT+SNPLPPPA APIPG SA+DLLAYERQ+AMSKM G++ +M
Sbjct: 322 YLSGRQMKCSWGSKPTPAGTASNPLPPPAPAPIPGFSASDLLAYERQLAMSKMAGMNPMM 381
Query: 387 -HPQAQHPLKQAAMGVGSAGASQAIYDG 413
HPQ QH KQAAM G+ G++QAIYDG
Sbjct: 382 HHPQGQHAFKQAAM--GATGSNQAIYDG 407
>gi|449517663|ref|XP_004165864.1| PREDICTED: nucleolysin TIAR-like, partial [Cucumis sativus]
Length = 394
Score = 675 bits (1742), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 326/377 (86%), Positives = 349/377 (92%), Gaps = 3/377 (0%)
Query: 38 QIEPIPSGNLPPGFDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSSYG 97
QIEPIPSGNLPPGFD STCRSVYVGNIH QVTEPLLQEVF S GPVEGCKL+RK+KSSYG
Sbjct: 6 QIEPIPSGNLPPGFDASTCRSVYVGNIHIQVTEPLLQEVFGSIGPVEGCKLVRKEKSSYG 65
Query: 98 FIHYFDRRSAAMAILSLNGRHLFGQPIKVNWAYASGQREDTSGHFNIFVGDLSPEVTDAT 157
F+HYFDRRSAA+AILSLNGRHLFGQPIKVNWAYAS QREDTSGHFNIFVGDLSPEVTDA
Sbjct: 66 FVHYFDRRSAALAILSLNGRHLFGQPIKVNWAYASSQREDTSGHFNIFVGDLSPEVTDAM 125
Query: 158 LFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNW 217
LFACFS Y SCSDARVMWDQKTGRSRGFGFVSFRNQQ+AQ+AINDLTGKWLGSRQIRCNW
Sbjct: 126 LFACFSAYSSCSDARVMWDQKTGRSRGFGFVSFRNQQEAQNAINDLTGKWLGSRQIRCNW 185
Query: 218 ATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQL 277
A KGAG NEDKQ SD KSVVEL+NGSSEDGKE+ N +APENN QYTTVYVGNLAPEV+QL
Sbjct: 186 AAKGAGVNEDKQGSDTKSVVELSNGSSEDGKESVNNDAPENNLQYTTVYVGNLAPEVSQL 245
Query: 278 DLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSW 337
DLHRHFHSLGAGVIEEVR+QRDKGFGFVRY+THAEAALAIQMGNT S+L G+Q+KCSW
Sbjct: 246 DLHRHFHSLGAGVIEEVRIQRDKGFGFVRYNTHAEAALAIQMGNT--RSFLCGRQIKCSW 303
Query: 338 GSKPTPPGTSSNPLPPPAAAPIPGLSAADLLAYERQIAMSKMGGVH-ALMHPQAQHPLKQ 396
GSKPTPPGT+SNPLP PA A PGLSAADLLAYERQ+A++KMGGVH ALMHPQ HP+KQ
Sbjct: 304 GSKPTPPGTTSNPLPLPAVASTPGLSAADLLAYERQLAITKMGGVHAALMHPQGPHPMKQ 363
Query: 397 AAMGVGSAGASQAIYDG 413
A MG+G+A ASQA+YDG
Sbjct: 364 APMGMGAAAASQALYDG 380
>gi|82400162|gb|ABB72820.1| oligouridylate binding protein-like protein [Solanum tuberosum]
Length = 417
Score = 674 bits (1740), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 333/385 (86%), Positives = 359/385 (93%), Gaps = 7/385 (1%)
Query: 29 YHPGLLAAPQIEPIPSGNLPPGFDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKL 88
YHPGLLA PQIEPIPSGNLPPGFDPSTCRSV+VGNIH QVTEPLLQEVFSSTG VEGCKL
Sbjct: 26 YHPGLLAPPQIEPIPSGNLPPGFDPSTCRSVFVGNIHPQVTEPLLQEVFSSTGLVEGCKL 85
Query: 89 IRKDKSSYGFIHYFDRRSAAMAILSLNGRHLFGQPIKVNWAYASGQREDTSGHFNIFVGD 148
IRK+KSSYGFIHY+DRRSAA+AI+SLNGRHLFGQPIKVNWA+ASGQREDTS HFNIFVGD
Sbjct: 86 IRKEKSSYGFIHYYDRRSAALAIVSLNGRHLFGQPIKVNWAFASGQREDTSSHFNIFVGD 145
Query: 149 LSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWL 208
LSPEVTDA LFACFSVYP CSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWL
Sbjct: 146 LSPEVTDAMLFACFSVYPGCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWL 205
Query: 209 GSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVG 268
GSRQIRCNWATKGA +N+DKQSSDAKSVVELTNGSSEDGKE N++APENNPQYTTVYVG
Sbjct: 206 GSRQIRCNWATKGANSNDDKQSSDAKSVVELTNGSSEDGKEAANSDAPENNPQYTTVYVG 265
Query: 269 NLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYL 328
N+APEVTQLDLHR+FH+LGAGVIEE+R+QRDKGFGFVRY+THAEAALAIQMGNT S L
Sbjct: 266 NIAPEVTQLDLHRYFHALGAGVIEEIRIQRDKGFGFVRYNTHAEAALAIQMGNT--HSVL 323
Query: 329 FGKQMKCSWGSKPTPPGTSSNPLPPPAAAPIPGLSAADLLAYERQIAMSKMGGVHALMHP 388
G+Q+KCSWG+KPTPPGT+SNPLPPPA P+ G+SA DLLAYERQ+AMSKMGGV LM
Sbjct: 324 GGRQIKCSWGNKPTPPGTTSNPLPPPAPTPL-GISATDLLAYERQLAMSKMGGVPGLM-- 380
Query: 389 QAQHPLKQAAMGVGSAGASQAIYDG 413
Q+PLKQA+MG+ S GASQAIYDG
Sbjct: 381 -GQYPLKQASMGMAS-GASQAIYDG 403
>gi|297829972|ref|XP_002882868.1| hypothetical protein ARALYDRAFT_478823 [Arabidopsis lyrata subsp.
lyrata]
gi|297328708|gb|EFH59127.1| hypothetical protein ARALYDRAFT_478823 [Arabidopsis lyrata subsp.
lyrata]
Length = 430
Score = 672 bits (1733), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 324/387 (83%), Positives = 356/387 (91%), Gaps = 2/387 (0%)
Query: 27 SLYHPGLLAAPQIEPIPSGNLPPGFDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGC 86
SLYHPG+LA PQ+EP+PSGNLPPGFDPSTCRSVYVGNIHTQVTEPLLQE+F+STGPVE
Sbjct: 31 SLYHPGVLAPPQLEPVPSGNLPPGFDPSTCRSVYVGNIHTQVTEPLLQEIFTSTGPVESS 90
Query: 87 KLIRKDKSSYGFIHYFDRRSAAMAILSLNGRHLFGQPIKVNWAYASGQREDTSGHFNIFV 146
KLIRKDKSSYGF+HYFDRRSAA+AILSLNGRHLFGQPIKVNWAYA+GQREDTS HFNIFV
Sbjct: 91 KLIRKDKSSYGFVHYFDRRSAALAILSLNGRHLFGQPIKVNWAYATGQREDTSSHFNIFV 150
Query: 147 GDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGK 206
GDLSPEVTDATL+ FSV+ SCSDARVMWDQKTGRSRGFGFVSFRNQQDAQ+AIN++ GK
Sbjct: 151 GDLSPEVTDATLYQSFSVFSSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQTAINEMNGK 210
Query: 207 WLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVY 266
WL SRQIRCNWATKGA + +DK SSD KSVVELT GSSEDGKET N EAPENN Q+TTVY
Sbjct: 211 WLSSRQIRCNWATKGATSGDDKLSSDGKSVVELTTGSSEDGKETLNEEAPENNSQFTTVY 270
Query: 267 VGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSS 326
VGNLAPEVTQLDLHR+FH+LGAGVIEEVRVQRDKGFGFVRY+TH EAALAIQMGNT
Sbjct: 271 VGNLAPEVTQLDLHRYFHALGAGVIEEVRVQRDKGFGFVRYNTHPEAALAIQMGNT--QP 328
Query: 327 YLFGKQMKCSWGSKPTPPGTSSNPLPPPAAAPIPGLSAADLLAYERQIAMSKMGGVHALM 386
YLF +Q+KCSWG+KPTPPGT+SNPLPPPA AP+PGLSAADLLAYERQ+A+SKM V+ALM
Sbjct: 329 YLFNRQIKCSWGNKPTPPGTASNPLPPPAPAPVPGLSAADLLAYERQLALSKMASVNALM 388
Query: 387 HPQAQHPLKQAAMGVGSAGASQAIYDG 413
HPQ QHPL+Q A G+ +AGA+ A+YDG
Sbjct: 389 HPQGQHPLRQGAHGINAAGATAAMYDG 415
>gi|357514131|ref|XP_003627354.1| RNA-binding protein [Medicago truncatula]
gi|355521376|gb|AET01830.1| RNA-binding protein [Medicago truncatula]
Length = 389
Score = 671 bits (1731), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 332/381 (87%), Positives = 354/381 (92%), Gaps = 8/381 (2%)
Query: 34 LAAPQIEPIPSGNLPPGFDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDK 93
+ +IEPIPSGNLPPGFDPSTCRSVYVGN+HTQVTEPLLQEVF+ TGPVEGCKL RK+K
Sbjct: 1 MGVLRIEPIPSGNLPPGFDPSTCRSVYVGNVHTQVTEPLLQEVFAGTGPVEGCKLFRKEK 60
Query: 94 SSYGFIHYFDRRSAAMAILSLNGRHLFGQPIKVNWAYASGQREDTSGHFNIFVGDLSPEV 153
SSYGFIHYFDRRSAA+AIL+LNGRHLFGQPIKVNWAYASGQREDTSGH+NIFVGDLSPEV
Sbjct: 61 SSYGFIHYFDRRSAALAILTLNGRHLFGQPIKVNWAYASGQREDTSGHYNIFVGDLSPEV 120
Query: 154 TDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQI 213
TDATLFACFSVY SCSDARVMWDQKTGRSRGFGFVSFR+QQDAQSAINDLTGKWLGSRQI
Sbjct: 121 TDATLFACFSVYQSCSDARVMWDQKTGRSRGFGFVSFRSQQDAQSAINDLTGKWLGSRQI 180
Query: 214 RCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPE 273
RCNWATKGAG E+KQ+SD+KSVVELTNGSSEDGKE ++ + PENNPQYTTVYVGNL E
Sbjct: 181 RCNWATKGAGGIEEKQNSDSKSVVELTNGSSEDGKEISSNDVPENNPQYTTVYVGNLGSE 240
Query: 274 VTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQM 333
TQLDLHRHFH+LGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGN SYL GK +
Sbjct: 241 ATQLDLHRHFHALGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNA--QSYLCGKII 298
Query: 334 KCSWGSKPTPPGTSSNPLPPPAAAPIPGLSAADLLAYERQIAMSKMGGVH-ALMHPQAQH 392
KCSWGSKPTPPGT+SNPLPPPAAAP+PGLSA D+LAYERQ+AMSKMGGVH ALMHPQAQH
Sbjct: 299 KCSWGSKPTPPGTASNPLPPPAAAPLPGLSATDILAYERQLAMSKMGGVHAALMHPQAQH 358
Query: 393 PLKQAAMGVGSAGASQAIYDG 413
PLKQAA+ GASQAIYDG
Sbjct: 359 PLKQAAI-----GASQAIYDG 374
>gi|186478580|ref|NP_001117301.1| oligouridylate binding protein 1B [Arabidopsis thaliana]
gi|332191459|gb|AEE29580.1| oligouridylate binding protein 1B [Arabidopsis thaliana]
Length = 416
Score = 667 bits (1722), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 331/388 (85%), Positives = 356/388 (91%), Gaps = 8/388 (2%)
Query: 27 SLYHPGLLAAPQIEPIPSGNLPPGFDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGC 86
SLYHPGLLA PQIEPIPSGNLPPGFDPSTCRSVYVGNIH QVTEPLLQEVF+ TGPVE C
Sbjct: 24 SLYHPGLLAPPQIEPIPSGNLPPGFDPSTCRSVYVGNIHIQVTEPLLQEVFAGTGPVESC 83
Query: 87 KLIRKDKSSYGFIHYFDRRSAAMAILSLNGRHLFGQPIKVNWAYASGQREDTSGHFNIFV 146
KLIRK+KSSYGF+HYFDRRSA +AILSLNGRHLFGQPIKVNWAYASGQREDTS HFNIFV
Sbjct: 84 KLIRKEKSSYGFVHYFDRRSAGLAILSLNGRHLFGQPIKVNWAYASGQREDTSSHFNIFV 143
Query: 147 GDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGK 206
GDLSPEVTDA LF CFSVYP+CSDARVMWDQKTGRSRGFGFVSFRNQQDAQ+AI+++TGK
Sbjct: 144 GDLSPEVTDAMLFTCFSVYPTCSDARVMWDQKTGRSRGFGFVSFRNQQDAQTAIDEITGK 203
Query: 207 WLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVY 266
WLGSRQIRCNWATKGA + EDKQSSD+KSVVELT+G DGK+TTN EAPENN QYTTVY
Sbjct: 204 WLGSRQIRCNWATKGATSGEDKQSSDSKSVVELTSG---DGKDTTNGEAPENNAQYTTVY 260
Query: 267 VGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSS 326
VGNLAPEV+Q+DLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTH EAALAIQMGNT S
Sbjct: 261 VGNLAPEVSQVDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHVEAALAIQMGNT--HS 318
Query: 327 YLFGKQMKCSWGSKPTPPGTSSNPLPPPAAAPIPGLSAADLLAYERQIAMSKMGGVHALM 386
YL G+QMKCSWGSKPTP GT+SNPLPPPA APIPG SA+DLLAYERQ+AMSKM G++ +M
Sbjct: 319 YLSGRQMKCSWGSKPTPAGTASNPLPPPAPAPIPGFSASDLLAYERQLAMSKMAGMNPMM 378
Query: 387 -HPQAQHPLKQAAMGVGSAGASQAIYDG 413
HPQ QH KQAAM G+ G++QAIYDG
Sbjct: 379 HHPQGQHAFKQAAM--GATGSNQAIYDG 404
>gi|21593280|gb|AAM65229.1| oligouridylate binding protein, putative [Arabidopsis thaliana]
Length = 427
Score = 664 bits (1712), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 322/387 (83%), Positives = 354/387 (91%), Gaps = 3/387 (0%)
Query: 27 SLYHPGLLAAPQIEPIPSGNLPPGFDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGC 86
SLYHPG+LA PQ+EP+PSGNLPPGFDPSTCRSVYVGNIHTQVTEPLLQE+F+STGPVE
Sbjct: 29 SLYHPGVLAPPQLEPVPSGNLPPGFDPSTCRSVYVGNIHTQVTEPLLQEIFTSTGPVESS 88
Query: 87 KLIRKDKSSYGFIHYFDRRSAAMAILSLNGRHLFGQPIKVNWAYASGQREDTSGHFNIFV 146
KLIRKDKSSYGF+HYFDRRSAA+AILSLNGRHLFGQPIKVNWAYA+GQREDTS HFNIFV
Sbjct: 89 KLIRKDKSSYGFVHYFDRRSAALAILSLNGRHLFGQPIKVNWAYATGQREDTSSHFNIFV 148
Query: 147 GDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGK 206
GDLSPEVTDATL+ FSV+ SCSDARVMWDQKTGRSRGFGFVSFRNQQDAQ+AIN++ GK
Sbjct: 149 GDLSPEVTDATLYQSFSVFSSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQTAINEMNGK 208
Query: 207 WLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVY 266
WL SRQIRCNWATKGA + +DK SSD KSVVELT GSSEDGKET N E PENN Q+TTVY
Sbjct: 209 WLSSRQIRCNWATKGATSGDDKLSSDGKSVVELTTGSSEDGKETLNEETPENNSQFTTVY 268
Query: 267 VGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSS 326
VGNLAPEVTQLDLHR+FH+LGAGVIEEVRVQRDKGFGFVRY+TH EAALAIQMGNT
Sbjct: 269 VGNLAPEVTQLDLHRYFHALGAGVIEEVRVQRDKGFGFVRYNTHPEAALAIQMGNT--QP 326
Query: 327 YLFGKQMKCSWGSKPTPPGTSSNPLPPPAAAPIPGLSAADLLAYERQIAMSKMGGVHALM 386
YLF +Q+KCSWG+KPTPPGT+SNPLPPPA AP+PGLSAADLL YERQ+A+SKM V+ALM
Sbjct: 327 YLFNRQIKCSWGNKPTPPGTASNPLPPPAPAPVPGLSAADLLNYERQLALSKMASVNALM 386
Query: 387 HPQAQHPLKQAAMGVGSAGASQAIYDG 413
HPQ QHPL+Q A G+ +AGA+ A+YDG
Sbjct: 387 HPQGQHPLRQ-AHGINAAGATAAMYDG 412
>gi|356565743|ref|XP_003551097.1| PREDICTED: nucleolysin TIAR-like [Glycine max]
Length = 411
Score = 661 bits (1705), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 311/394 (78%), Positives = 346/394 (87%), Gaps = 3/394 (0%)
Query: 13 QQQALMQQALLQQQSLYHPGLLAAPQIEPIPSGNLPPGFDPSTCRSVYVGNIHTQVTEPL 72
Q Q L QQA++Q +HP LL PQIEPI SGNLPPGFD S+CRSVYVGNIH QVT+ L
Sbjct: 2 QPQRLRQQAMMQPSLYHHPALLTPPQIEPILSGNLPPGFDSSSCRSVYVGNIHPQVTDSL 61
Query: 73 LQEVFSSTGPVEGCKLIRKDKSSYGFIHYFDRRSAAMAILSLNGRHLFGQPIKVNWAYAS 132
LQE+FS+ G +EGCKLIRK+KSSYGF+ YFDR SAA AI++LNGR++FGQPIKVNWAYAS
Sbjct: 62 LQELFSTAGALEGCKLIRKEKSSYGFVDYFDRSSAAFAIVTLNGRNIFGQPIKVNWAYAS 121
Query: 133 GQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRN 192
QREDTSGHFNIFVGDLSPEVTDATL+ACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRN
Sbjct: 122 SQREDTSGHFNIFVGDLSPEVTDATLYACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRN 181
Query: 193 QQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTN 252
QQDAQSAINDLTGKWLGSRQIRCNWATKGA +++KQ+SD++SVVELTNGSSEDG+ETTN
Sbjct: 182 QQDAQSAINDLTGKWLGSRQIRCNWATKGASASDEKQTSDSRSVVELTNGSSEDGQETTN 241
Query: 253 TEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAE 312
+ PE NPQYTTVYVGNLAPEVT +DLH+HFHSL AG IE+VRVQRDKGFGFVRYSTHAE
Sbjct: 242 DDTPEKNPQYTTVYVGNLAPEVTSVDLHQHFHSLNAGTIEDVRVQRDKGFGFVRYSTHAE 301
Query: 313 AALAIQMGNTTQSSYLFGKQMKCSWGSKPTPPGTSSNPLPPPAAAPIPGLSAADLLAYER 372
AALAIQMGN + LFGK +KCSWGSKPTPPGT+S PLPPP +A + G S A L AYER
Sbjct: 302 AALAIQMGN---ARILFGKPIKCSWGSKPTPPGTASTPLPPPTSANVSGFSLASLAAYER 358
Query: 373 QIAMSKMGGVHALMHPQAQHPLKQAAMGVGSAGA 406
Q+A+SKMGG HALMH Q QH LKQ AMG+G+ GA
Sbjct: 359 QMALSKMGGAHALMHQQGQHALKQVAMGMGAPGA 392
>gi|15231783|ref|NP_188026.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|9294635|dbj|BAB02974.1| RNA binding protein nucleolysin; oligouridylate binding protein
[Arabidopsis thaliana]
gi|22655004|gb|AAM98093.1| AT3g14100/MAG2_5 [Arabidopsis thaliana]
gi|28416511|gb|AAO42786.1| AT3g14100/MAG2_5 [Arabidopsis thaliana]
gi|332641947|gb|AEE75468.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 427
Score = 660 bits (1704), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 321/387 (82%), Positives = 353/387 (91%), Gaps = 3/387 (0%)
Query: 27 SLYHPGLLAAPQIEPIPSGNLPPGFDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGC 86
SLYHPG+LA PQ+EP+PSGNLPPGFDPSTCRSVYVGNIHTQVTEPLLQE+F+STGPVE
Sbjct: 29 SLYHPGVLAPPQLEPVPSGNLPPGFDPSTCRSVYVGNIHTQVTEPLLQEIFTSTGPVESS 88
Query: 87 KLIRKDKSSYGFIHYFDRRSAAMAILSLNGRHLFGQPIKVNWAYASGQREDTSGHFNIFV 146
KLIRKDKSSYGF+HYFDRRSAA+AILSLNGRHLFGQPIKVNWAYA+GQREDTS HFNIFV
Sbjct: 89 KLIRKDKSSYGFVHYFDRRSAALAILSLNGRHLFGQPIKVNWAYATGQREDTSSHFNIFV 148
Query: 147 GDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGK 206
GDLSPEVTDATL+ FSV+ SCSDARVMWDQKTGRSRGFGFVSFRNQQDAQ+AIN++ GK
Sbjct: 149 GDLSPEVTDATLYQSFSVFSSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQTAINEMNGK 208
Query: 207 WLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVY 266
WL SRQIRCNWATKGA + +DK SSD KSVVELT GSSEDGKET N E PENN Q+TTVY
Sbjct: 209 WLSSRQIRCNWATKGATSGDDKLSSDGKSVVELTTGSSEDGKETLNEETPENNSQFTTVY 268
Query: 267 VGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSS 326
VGNLAPEVTQLDLHR+FH+LGAGVIEEVRVQRDKGFGFVRY+TH EAALAIQMGNT
Sbjct: 269 VGNLAPEVTQLDLHRYFHALGAGVIEEVRVQRDKGFGFVRYNTHPEAALAIQMGNT--QP 326
Query: 327 YLFGKQMKCSWGSKPTPPGTSSNPLPPPAAAPIPGLSAADLLAYERQIAMSKMGGVHALM 386
YLF +Q+KCSWG+KPTPPGT+SNPLPPPA AP+PGLSAADLL YERQ+A+SKM V+ALM
Sbjct: 327 YLFNRQIKCSWGNKPTPPGTASNPLPPPAPAPVPGLSAADLLNYERQLALSKMASVNALM 386
Query: 387 HPQAQHPLKQAAMGVGSAGASQAIYDG 413
H Q QHPL+Q A G+ +AGA+ A+YDG
Sbjct: 387 HQQGQHPLRQ-AHGINAAGATAAMYDG 412
>gi|449446638|ref|XP_004141078.1| PREDICTED: nucleolysin TIAR-like [Cucumis sativus]
Length = 420
Score = 655 bits (1690), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 323/420 (76%), Positives = 362/420 (86%), Gaps = 21/420 (5%)
Query: 1 MQHQRLKQQQQQQQQALMQQALLQQQSLYHPGLLAAPQIEPIPSGNLPPGFDPSTCRSVY 60
MQ+QRL+QQ A+MQQ+L HPGLLAAPQIEPI SGNLPPGFD STCRSVY
Sbjct: 1 MQYQRLRQQ------AMMQQSLYP-----HPGLLAAPQIEPILSGNLPPGFDSSTCRSVY 49
Query: 61 VGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSSYGFIHYFDRRSAAMAILSLNGRHLF 120
VGNIH QVTEPLLQEVFSS GP+EGCKLIRK+KSSYGF+ YFDRRSAA++I+SLNGR+LF
Sbjct: 50 VGNIHPQVTEPLLQEVFSSIGPIEGCKLIRKEKSSYGFVDYFDRRSAAVSIISLNGRNLF 109
Query: 121 GQPIKVNWAYASGQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTG 180
GQPIKVNWAYAS QREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTG
Sbjct: 110 GQPIKVNWAYASSQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTG 169
Query: 181 RSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELT 240
RSRG+GFV+FRN+QDAQSAIND+ GKWLGSRQIRCNWATKGA + +DKQSSD++SVVELT
Sbjct: 170 RSRGYGFVAFRNEQDAQSAINDINGKWLGSRQIRCNWATKGANSGDDKQSSDSRSVVELT 229
Query: 241 NGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDK 300
+G+S+ G+E +N +APENNPQYTTVYVGNLAPEVT +DLHR+FH+LGAG IE+VRVQRDK
Sbjct: 230 SGTSDGGQEKSNEDAPENNPQYTTVYVGNLAPEVTSVDLHRYFHALGAGTIEDVRVQRDK 289
Query: 301 GFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSKPTPPGTSSNPLPPPAAAPIP 360
GFGFVRYST+AEAALAIQ GN + + GK +KCSWGSKPTPPGT+S PLPPP I
Sbjct: 290 GFGFVRYSTNAEAALAIQTGN---ARVVCGKPIKCSWGSKPTPPGTNSTPLPPPNVGHIS 346
Query: 361 GLSAADLLAYERQIAMSKMGGVHALMHPQ-AQHPLKQ------AAMGVGSAGASQAIYDG 413
GLSAADL +YERQ+A+SKMG ALMHPQ AQH LKQ +G+G AG SQ IYDG
Sbjct: 347 GLSAADLASYERQMALSKMGAAQALMHPQAAQHALKQAAMGMGMGIGMGGAGTSQTIYDG 406
>gi|255641747|gb|ACU21144.1| unknown [Glycine max]
Length = 397
Score = 641 bits (1654), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 305/393 (77%), Positives = 339/393 (86%), Gaps = 4/393 (1%)
Query: 13 QQQALMQQALLQQQSLYHPGLLAAPQIEPIPSGNLPPGFDPSTCRSVYVGNIHTQVTEPL 72
Q Q L Q A+LQ +HP LL PQIEPI SGNLPPGFD S+CRSVYVGNIH QVT+ L
Sbjct: 2 QPQRLRQHAMLQPSLYHHPALLTPPQIEPILSGNLPPGFDSSSCRSVYVGNIHPQVTDSL 61
Query: 73 LQEVFSSTGPVEGCKLIRKDKSSYGFIHYFDRRSAAMAILSLNGRHLFGQPIKVNWAYAS 132
LQE+FS+ G +EGCKLIRK+KSSYGF+ YFDR SAA AI++LNGR++FGQPIKVNWAYAS
Sbjct: 62 LQELFSTAGALEGCKLIRKEKSSYGFVDYFDRSSAAFAIVTLNGRNIFGQPIKVNWAYAS 121
Query: 133 GQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRN 192
QREDTSGHFNIFVGDLSPEVTDATL+ACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRN
Sbjct: 122 SQREDTSGHFNIFVGDLSPEVTDATLYACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRN 181
Query: 193 QQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTN 252
QQDAQSAINDLTGKWLGSRQIRCNWATKGA +++KQSSD+K VVEL NGSSE+G+ETTN
Sbjct: 182 QQDAQSAINDLTGKWLGSRQIRCNWATKGASASDEKQSSDSKIVVELINGSSEEGQETTN 241
Query: 253 TEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAE 312
+ PE NPQYTTVYVGNLAPEVT +DLH+HFHSL AG+IE+VRVQRDKGFGFVRYSTHAE
Sbjct: 242 DDTPEKNPQYTTVYVGNLAPEVTSVDLHQHFHSLNAGIIEDVRVQRDKGFGFVRYSTHAE 301
Query: 313 AALAIQMGNTTQSSYLFGKQMKCSWGSKPTPPGTSSNPLPPPAAAPIPGLSAADLLAYER 372
AALAIQMGN + LFGK +KCSWGSKPTP GT+S PL PP+A +PG S A L AYER
Sbjct: 302 AALAIQMGN---ARILFGKPIKCSWGSKPTPLGTASTPLLPPSAN-VPGFSLAGLAAYER 357
Query: 373 QIAMSKMGGVHALMHPQAQHPLKQAAMGVGSAG 405
Q+A+SKMGG H LMH Q QH LK MG+G+ G
Sbjct: 358 QMALSKMGGAHTLMHQQGQHALKHVDMGMGATG 390
>gi|356547954|ref|XP_003542369.1| PREDICTED: nucleolysin TIAR-like [Glycine max]
Length = 410
Score = 641 bits (1653), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 305/393 (77%), Positives = 339/393 (86%), Gaps = 4/393 (1%)
Query: 13 QQQALMQQALLQQQSLYHPGLLAAPQIEPIPSGNLPPGFDPSTCRSVYVGNIHTQVTEPL 72
Q Q L Q A+LQ +HP LL PQIEPI SGNLPPGFD S+CRSVYVGNIH QVT+ L
Sbjct: 2 QPQRLRQHAMLQPSLYHHPALLTPPQIEPILSGNLPPGFDSSSCRSVYVGNIHPQVTDSL 61
Query: 73 LQEVFSSTGPVEGCKLIRKDKSSYGFIHYFDRRSAAMAILSLNGRHLFGQPIKVNWAYAS 132
LQE+FS+ G +EGCKLIRK+KSSYGF+ YFDR SAA AI++LNGR++FGQPIKVNWAYAS
Sbjct: 62 LQELFSTAGALEGCKLIRKEKSSYGFVDYFDRSSAAFAIVTLNGRNIFGQPIKVNWAYAS 121
Query: 133 GQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRN 192
QREDTSGHFNIFVGDLSPEVTDATL+ACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRN
Sbjct: 122 SQREDTSGHFNIFVGDLSPEVTDATLYACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRN 181
Query: 193 QQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTN 252
QQDAQSAINDLTGKWLGSRQIRCNWATKGA +++KQSSD+K VVEL NGSSE+G+ETTN
Sbjct: 182 QQDAQSAINDLTGKWLGSRQIRCNWATKGASASDEKQSSDSKIVVELINGSSEEGQETTN 241
Query: 253 TEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAE 312
+ PE NPQYTTVYVGNLAPEVT +DLH+HFHSL AG+IE+VRVQRDKGFGFVRYSTHAE
Sbjct: 242 DDTPEKNPQYTTVYVGNLAPEVTSVDLHQHFHSLNAGIIEDVRVQRDKGFGFVRYSTHAE 301
Query: 313 AALAIQMGNTTQSSYLFGKQMKCSWGSKPTPPGTSSNPLPPPAAAPIPGLSAADLLAYER 372
AALAIQMGN + LFGK +KCSWGSKPTP GT+S PL PP+A +PG S A L AYER
Sbjct: 302 AALAIQMGN---ARILFGKPIKCSWGSKPTPLGTASTPLLPPSAN-VPGFSLAGLAAYER 357
Query: 373 QIAMSKMGGVHALMHPQAQHPLKQAAMGVGSAG 405
Q+A+SKMGG H LMH Q QH LK MG+G+ G
Sbjct: 358 QMALSKMGGAHTLMHQQGQHALKHVDMGMGATG 390
>gi|6996560|emb|CAB75429.1| oligouridylate binding protein [Nicotiana plumbaginifolia]
Length = 406
Score = 629 bits (1621), Expect = e-177, Method: Compositional matrix adjust.
Identities = 299/365 (81%), Positives = 327/365 (89%), Gaps = 5/365 (1%)
Query: 29 YHPGLLAAPQIEPIPSGNLPPGFDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKL 88
YHPGLLA PQIEPI SGNLPPGFD STCRSVYVGNIH QVTEPLLQEVF+STGP+EGCKL
Sbjct: 21 YHPGLLAPPQIEPILSGNLPPGFDSSTCRSVYVGNIHPQVTEPLLQEVFASTGPLEGCKL 80
Query: 89 IRKDKSSYGFIHYFDRRSAAMAILSLNGRHLFGQPIKVNWAYASGQREDTSGHFNIFVGD 148
IRKDKSSYGF+ YFDRRSAA+AI++LNGRHLFGQPIKVNWAYAS QREDTS H+NIFVGD
Sbjct: 81 IRKDKSSYGFVDYFDRRSAALAIVTLNGRHLFGQPIKVNWAYASAQREDTSNHYNIFVGD 140
Query: 149 LSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWL 208
LSPEVTDATLFACFSVY SCSDARVMWDQKTGRSRGFGFVSFRNQQ+AQSAINDL GKWL
Sbjct: 141 LSPEVTDATLFACFSVYTSCSDARVMWDQKTGRSRGFGFVSFRNQQEAQSAINDLNGKWL 200
Query: 209 GSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKE-TTNTEAPENNPQYTTVYV 267
GSRQIRCNWA KGAG +Q+SDAKSVVELT+G+S+DG+E N +APENNPQYTTVYV
Sbjct: 201 GSRQIRCNWAAKGAG-AVGEQNSDAKSVVELTSGTSDDGQEKVVNEDAPENNPQYTTVYV 259
Query: 268 GNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSY 327
GNLAPEVT +DLHRHFH+LGAGVIE+VR+QRDKGFGFVRYS+HAEAA AIQ+GN +
Sbjct: 260 GNLAPEVTSVDLHRHFHALGAGVIEDVRIQRDKGFGFVRYSSHAEAARAIQLGN---ARL 316
Query: 328 LFGKQMKCSWGSKPTPPGTSSNPLPPPAAAPIPGLSAADLLAYERQIAMSKMGGVHALMH 387
LFGK +KCSWGSKPTPPG+SSNPLPPPA IPGLSA DL AY+RQ+A++KM G A M
Sbjct: 317 LFGKPVKCSWGSKPTPPGSSSNPLPPPAIGQIPGLSAMDLAAYQRQLALAKMAGAQAFMQ 376
Query: 388 PQAQH 392
PQ Q
Sbjct: 377 PQGQR 381
>gi|15221031|ref|NP_175810.1| oligouridylate-binding protein 1A [Arabidopsis thaliana]
gi|4587549|gb|AAD25780.1|AC006577_16 Similar to gb|U55861 RNA binding protein nucleolysin (TIAR) from
Mus musculus and contains several PF|00076 RNA
recognition motif domains. ESTs gb|T21032 and gb|T44127
come from this gene [Arabidopsis thaliana]
gi|13194792|gb|AAK15558.1|AF348587_1 putative oligouridylate binding protein [Arabidopsis thaliana]
gi|13605627|gb|AAK32807.1|AF361639_1 At1g54080/F15I1_16 [Arabidopsis thaliana]
gi|22137190|gb|AAM91440.1| At1g54080/F15I1_16 [Arabidopsis thaliana]
gi|332194924|gb|AEE33045.1| oligouridylate-binding protein 1A [Arabidopsis thaliana]
Length = 426
Score = 624 bits (1608), Expect = e-176, Method: Compositional matrix adjust.
Identities = 302/394 (76%), Positives = 346/394 (87%), Gaps = 10/394 (2%)
Query: 21 ALLQQQ-SLYHPGLLAAPQIEPIPSGNLPPGFDPSTCRSVYVGNIHTQVTEPLLQEVFSS 79
A++QQ SLYHPG++A PQ+EP+PSGNLPPGFDP+TCRSVY GNIHTQVTE LLQE+F+S
Sbjct: 26 AMMQQHPSLYHPGVMAPPQMEPLPSGNLPPGFDPTTCRSVYAGNIHTQVTEILLQEIFAS 85
Query: 80 TGPVEGCKLIRKDKSSYGFIHYFDRRSAAMAILSLNGRHLFGQPIKVNWAYASGQREDTS 139
TGP+E CKLIRKDKSSYGF+HYFDRR A+MAI++LNGRH+FGQP+KVNWAYA+GQREDTS
Sbjct: 86 TGPIESCKLIRKDKSSYGFVHYFDRRCASMAIMTLNGRHIFGQPMKVNWAYATGQREDTS 145
Query: 140 GHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSA 199
HFNIFVGDLSPEVTDA LF FS + SCSDARVMWDQKTGRSRGFGFVSFRNQQDAQ+A
Sbjct: 146 SHFNIFVGDLSPEVTDAALFDSFSAFNSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQTA 205
Query: 200 INDLTGKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENN 259
IN++ GKW+ SRQIRCNWATKGA EDK SSD KSVVELTNGSSEDG+E +N +APENN
Sbjct: 206 INEMNGKWVSSRQIRCNWATKGATFGEDKHSSDGKSVVELTNGSSEDGRELSNEDAPENN 265
Query: 260 PQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQM 319
PQ+TTVYVGNL+PEVTQLDLHR F++LGAGVIEEVRVQRDKGFGFVRY+TH EAALAIQM
Sbjct: 266 PQFTTVYVGNLSPEVTQLDLHRLFYTLGAGVIEEVRVQRDKGFGFVRYNTHDEAALAIQM 325
Query: 320 GNTTQSSYLFGKQMKCSWGSKPTPPGTSSNPLPPPAAAPIPGLSAADLLAYERQIAMSKM 379
GN +LF +Q++CSWG+KPTP GT+SNPLPPPA A +P LSA DLLAYERQ+A++K
Sbjct: 326 GNA--QPFLFSRQIRCSWGNKPTPSGTASNPLPPPAPASVPSLSAMDLLAYERQLALAK- 382
Query: 380 GGVHALMHPQAQHPLKQAAMGVGSAGASQAIYDG 413
MHPQAQH L+QA +GV AG + A+YDG
Sbjct: 383 ------MHPQAQHSLRQAGLGVNVAGGTAAMYDG 410
>gi|8778484|gb|AAF79492.1|AC022492_36 F1L3.2 [Arabidopsis thaliana]
Length = 575
Score = 619 bits (1596), Expect = e-175, Method: Compositional matrix adjust.
Identities = 323/440 (73%), Positives = 348/440 (79%), Gaps = 68/440 (15%)
Query: 38 QIEPIPSGNLPPGFDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSSYG 97
QIEPIPSGNLPPGFDPSTCRSVYVGNIH QVTEPLLQEVF+ TGPVE CKLIRK+KSSYG
Sbjct: 128 QIEPIPSGNLPPGFDPSTCRSVYVGNIHIQVTEPLLQEVFAGTGPVESCKLIRKEKSSYG 187
Query: 98 FIHYFDRRSAAMAILSLNGRHLFGQPIKVNWAYASGQREDTSGHFNIFVGDLSPEVTDAT 157
F+HYFDRRSA +AILSLNGRHLFGQPIKVNWAYASGQREDTS HFNIFVGDLSPEVTDA
Sbjct: 188 FVHYFDRRSAGLAILSLNGRHLFGQPIKVNWAYASGQREDTSSHFNIFVGDLSPEVTDAM 247
Query: 158 LFACFSVYPSCS-------------DARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLT 204
LF CFSVYP+CS DARVMWDQKTGRSRGFGFVSFRNQQDAQ+AI+++T
Sbjct: 248 LFTCFSVYPTCSFAETLPTIAIVCRDARVMWDQKTGRSRGFGFVSFRNQQDAQTAIDEIT 307
Query: 205 -------------------GKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSE 245
GKWLGSRQIRCNWATKGA + EDKQSSD+KSVVELT+G SE
Sbjct: 308 GECCNLFSPLIVDILFCFSGKWLGSRQIRCNWATKGATSGEDKQSSDSKSVVELTSGVSE 367
Query: 246 DGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFV 305
DGK+TTN EAPENN QYTTVYVGNLAPEV+Q+DLHRHFHSLGAGVIEEVRVQRDKGFGFV
Sbjct: 368 DGKDTTNGEAPENNAQYTTVYVGNLAPEVSQVDLHRHFHSLGAGVIEEVRVQRDKGFGFV 427
Query: 306 RYSTHAEAALAIQMGNTTQSSYLFGKQMK------------------------------- 334
RYSTH EAALAIQMGNT SYL G+QMK
Sbjct: 428 RYSTHVEAALAIQMGNT--HSYLSGRQMKVKLTNLNCSFVGLTILFGLGMLKLLCSLFLQ 485
Query: 335 CSWGSKPTPPGTSSNPLPPPAAAPIPGLSAADLLAYERQIAMSKMGGVHALM-HPQAQHP 393
CSWGSKPTP GT+SNPLPPPA APIPG SA+DLLAYERQ+AMSKM G++ +M HPQ QH
Sbjct: 486 CSWGSKPTPAGTASNPLPPPAPAPIPGFSASDLLAYERQLAMSKMAGMNPMMHHPQGQHA 545
Query: 394 LKQAAMGVGSAGASQAIYDG 413
KQAAM G+ G++QAIYDG
Sbjct: 546 FKQAAM--GATGSNQAIYDG 563
>gi|30695647|ref|NP_849806.1| oligouridylate-binding protein 1A [Arabidopsis thaliana]
gi|332194923|gb|AEE33044.1| oligouridylate-binding protein 1A [Arabidopsis thaliana]
Length = 430
Score = 618 bits (1593), Expect = e-174, Method: Compositional matrix adjust.
Identities = 302/398 (75%), Positives = 346/398 (86%), Gaps = 14/398 (3%)
Query: 21 ALLQQQ-SLYHPGLLAAPQIEPIPSGNLPPGFDPSTCRSVYVGNIHTQVTEPLLQEVFSS 79
A++QQ SLYHPG++A PQ+EP+PSGNLPPGFDP+TCRSVY GNIHTQVTE LLQE+F+S
Sbjct: 26 AMMQQHPSLYHPGVMAPPQMEPLPSGNLPPGFDPTTCRSVYAGNIHTQVTEILLQEIFAS 85
Query: 80 TGPVEGCKLIRKDKSSYGFIHYFDRRSAAMAILSLNGRHLFGQPIKVNWAYASGQREDTS 139
TGP+E CKLIRKDKSSYGF+HYFDRR A+MAI++LNGRH+FGQP+KVNWAYA+GQREDTS
Sbjct: 86 TGPIESCKLIRKDKSSYGFVHYFDRRCASMAIMTLNGRHIFGQPMKVNWAYATGQREDTS 145
Query: 140 GHFNIFVGDLSPEVTDATLFACFSVYPSCS----DARVMWDQKTGRSRGFGFVSFRNQQD 195
HFNIFVGDLSPEVTDA LF FS + SCS DARVMWDQKTGRSRGFGFVSFRNQQD
Sbjct: 146 SHFNIFVGDLSPEVTDAALFDSFSAFNSCSSYYRDARVMWDQKTGRSRGFGFVSFRNQQD 205
Query: 196 AQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEA 255
AQ+AIN++ GKW+ SRQIRCNWATKGA EDK SSD KSVVELTNGSSEDG+E +N +A
Sbjct: 206 AQTAINEMNGKWVSSRQIRCNWATKGATFGEDKHSSDGKSVVELTNGSSEDGRELSNEDA 265
Query: 256 PENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAAL 315
PENNPQ+TTVYVGNL+PEVTQLDLHR F++LGAGVIEEVRVQRDKGFGFVRY+TH EAAL
Sbjct: 266 PENNPQFTTVYVGNLSPEVTQLDLHRLFYTLGAGVIEEVRVQRDKGFGFVRYNTHDEAAL 325
Query: 316 AIQMGNTTQSSYLFGKQMKCSWGSKPTPPGTSSNPLPPPAAAPIPGLSAADLLAYERQIA 375
AIQMGN +LF +Q++CSWG+KPTP GT+SNPLPPPA A +P LSA DLLAYERQ+A
Sbjct: 326 AIQMGNA--QPFLFSRQIRCSWGNKPTPSGTASNPLPPPAPASVPSLSAMDLLAYERQLA 383
Query: 376 MSKMGGVHALMHPQAQHPLKQAAMGVGSAGASQAIYDG 413
++K MHPQAQH L+QA +GV AG + A+YDG
Sbjct: 384 LAK-------MHPQAQHSLRQAGLGVNVAGGTAAMYDG 414
>gi|297853192|ref|XP_002894477.1| hypothetical protein ARALYDRAFT_474538 [Arabidopsis lyrata subsp.
lyrata]
gi|297340319|gb|EFH70736.1| hypothetical protein ARALYDRAFT_474538 [Arabidopsis lyrata subsp.
lyrata]
Length = 417
Score = 617 bits (1591), Expect = e-174, Method: Compositional matrix adjust.
Identities = 316/415 (76%), Positives = 354/415 (85%), Gaps = 16/415 (3%)
Query: 1 MQHQRLKQQQQQQQQALMQQALLQQQ--SLYHPGLLAAPQIEPIPSGNLPPGFDPSTCRS 58
MQ+QRLK QQ QQQQ M Q + QQ SLYHPG++A PQ+EP+PSGNLPPGFDP+TCRS
Sbjct: 1 MQNQRLKHQQHQQQQQAMIQQAMMQQHPSLYHPGVMAPPQMEPLPSGNLPPGFDPTTCRS 60
Query: 59 VYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSSYGFIHYFDRRSAAMAILSLNGRH 118
VY GNIHTQVTE LLQE+F+STGP+E CKLIRKDKSSYGF+HYFDRR A+MAI++LNGRH
Sbjct: 61 VYAGNIHTQVTEILLQEIFASTGPIESCKLIRKDKSSYGFVHYFDRRCASMAIMTLNGRH 120
Query: 119 LFGQPIKVNWAYASGQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQK 178
+FGQP+KVNWAYA+GQREDTS HFNIFVGDLSPEVTDA LF FS + SCSDARVMWDQK
Sbjct: 121 IFGQPMKVNWAYATGQREDTSSHFNIFVGDLSPEVTDAALFDSFSAFNSCSDARVMWDQK 180
Query: 179 TGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVE 238
TGRSRGFGFVSFRNQQDAQ+AIN++ GKWL SRQIRCNWATKGA EDK SSD KSVVE
Sbjct: 181 TGRSRGFGFVSFRNQQDAQTAINEMNGKWLSSRQIRCNWATKGATFGEDKHSSDGKSVVE 240
Query: 239 LTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQR 298
LTNGSSEDG+E +N +APENNPQYTTVYVGNL+PEVTQLDLHR F++LGAG IEEVRVQR
Sbjct: 241 LTNGSSEDGRELSNEDAPENNPQYTTVYVGNLSPEVTQLDLHRLFYTLGAGAIEEVRVQR 300
Query: 299 DKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSKPTPPGTSSNPLPPPAAAP 358
DKGFGFVRY+TH EAALAIQMGN YLF +Q+KCSWG+KPTP GT+SNPLPPPA P
Sbjct: 301 DKGFGFVRYNTHDEAALAIQMGNA--QPYLFSRQIKCSWGNKPTPSGTASNPLPPPAPVP 358
Query: 359 IPGLSAADLLAYERQIAMSKMGGVHALMHPQAQHPLKQAAMGVGSAGASQAIYDG 413
+P LSA DLLAYERQ+ ++K MHPQAQH L+QA AG S A+YDG
Sbjct: 359 VPALSAMDLLAYERQLVLAK-------MHPQAQHSLRQAG-----AGGSAAMYDG 401
>gi|357479379|ref|XP_003609975.1| RNA-binding protein [Medicago truncatula]
gi|355511030|gb|AES92172.1| RNA-binding protein [Medicago truncatula]
Length = 404
Score = 599 bits (1544), Expect = e-169, Method: Compositional matrix adjust.
Identities = 284/374 (75%), Positives = 322/374 (86%), Gaps = 7/374 (1%)
Query: 15 QALMQQALLQQQSLY-HPGLLAAPQIEPIPSGNLPPGFDPSTCRSVYVGNIHTQVTEPLL 73
Q Q +++Q SLY HP L+ PQIEPI SGNLPPGFD STCRSVYVGNIH QV+EPLL
Sbjct: 4 QKFRQNPMIEQHSLYQHPALIT-PQIEPILSGNLPPGFDSSTCRSVYVGNIHPQVSEPLL 62
Query: 74 QEVFSSTGPVEGCKLIRKDKSSYGFIHYFDRRSAAMAILSLNGRHLFGQPIKVNWAYASG 133
QE+FSS G +EGCKLIRK+KSSYGF+ YFDR SAA+AI++LNGR++FGQ IKVNWAY G
Sbjct: 63 QELFSSAGALEGCKLIRKEKSSYGFVDYFDRSSAAIAIVTLNGRNIFGQSIKVNWAYTRG 122
Query: 134 QREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQ 193
QREDTSGHF+IFVGDLSPEVTDATL+ACFS Y SCSDARVMWDQKTGRSRGFGFVSFRNQ
Sbjct: 123 QREDTSGHFHIFVGDLSPEVTDATLYACFSAYSSCSDARVMWDQKTGRSRGFGFVSFRNQ 182
Query: 194 QDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNT 253
Q+AQSAINDLTGKWLGSRQIRCNWATKGA N + QSS++KSVVELT+G+SE+ +E T+
Sbjct: 183 QEAQSAINDLTGKWLGSRQIRCNWATKGANMNGENQSSESKSVVELTSGTSEEAQEMTSD 242
Query: 254 EAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEA 313
++PE NPQYTTVYVGNLAPEVT +DLH HFH+LG G IE+VRVQRDKGFGFVRYSTH EA
Sbjct: 243 DSPEKNPQYTTVYVGNLAPEVTSVDLHHHFHALGVGTIEDVRVQRDKGFGFVRYSTHGEA 302
Query: 314 ALAIQMGNTTQSSYLFGKQMKCSWGSKPTPPGTSSNPLPPPAA--APIPGLSAADLLAYE 371
ALAIQMGNT +LFGK +KCSWGSKPTPPGT+S PLPPPA+ P+PG S A L YE
Sbjct: 303 ALAIQMGNT---RFLFGKPIKCSWGSKPTPPGTASTPLPPPASTHVPVPGFSPAGLALYE 359
Query: 372 RQIAMSKMGGVHAL 385
RQ+A+SKM HA+
Sbjct: 360 RQLALSKMNEAHAV 373
>gi|357156104|ref|XP_003577343.1| PREDICTED: nucleolysin TIAR-like [Brachypodium distachyon]
Length = 451
Score = 598 bits (1541), Expect = e-168, Method: Compositional matrix adjust.
Identities = 294/387 (75%), Positives = 324/387 (83%), Gaps = 9/387 (2%)
Query: 30 HPGLLAAPQIEPIPSGNLPPGFDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLI 89
HPGLLAAPQIEPI SGNLPPGFD STCRSVYVGNIH QVT+ LL EVF S GPVEGCKLI
Sbjct: 50 HPGLLAAPQIEPIVSGNLPPGFDSSTCRSVYVGNIHLQVTDSLLHEVFQSIGPVEGCKLI 109
Query: 90 RKDKSSYGFIHYFDRRSAAMAILSLNGRHLFGQPIKVNWAYASGQREDTSGHFNIFVGDL 149
RK+KSS+GF+ Y+DRRSAA+AI+SLNGR LFGQPIKVNWAYAS QREDTSGHFNIFVGDL
Sbjct: 110 RKEKSSFGFVDYYDRRSAALAIVSLNGRQLFGQPIKVNWAYASTQREDTSGHFNIFVGDL 169
Query: 150 SPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLG 209
PEVTDA LFA FS Y +CSDARVMWDQKTGRSRGFGFVSFRNQQDAQ+AIN+L GKWLG
Sbjct: 170 CPEVTDAALFAFFSAYSTCSDARVMWDQKTGRSRGFGFVSFRNQQDAQTAINELNGKWLG 229
Query: 210 SRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGN 269
+RQIRCNWATKGA E+KQ++D+K +VEL NGSSE GKE N + PENNPQYTTVYVGN
Sbjct: 230 NRQIRCNWATKGANAGEEKQNTDSKGMVELINGSSEAGKENANEDGPENNPQYTTVYVGN 289
Query: 270 LAPEVTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLF 329
L ++ D+HR FH LGAG IEEVRV RDKGFGFVRYSTH EAALAIQ GN +
Sbjct: 290 LPHDINSNDVHRFFHLLGAGSIEEVRVTRDKGFGFVRYSTHEEAALAIQTGN---GQLVG 346
Query: 330 GKQMKCSWGSKPTPPGTSSNPLPPPAAAP---IPGLSAADLLAYERQIAMSKMGGVHALM 386
G+Q+KCSWGSKPTPPGT+S PLPPPA A PG+SAADL +YER +A+SKM G ALM
Sbjct: 347 GRQIKCSWGSKPTPPGTASAPLPPPALAVAPYTPGVSAADLFSYERSLALSKMAGNPALM 406
Query: 387 HPQAQHPLKQAAMGVGSAGASQAIYDG 413
A L+QAAMG+G AGASQAIYDG
Sbjct: 407 GQHAA--LRQAAMGMG-AGASQAIYDG 430
>gi|255550383|ref|XP_002516242.1| nucleolysin tia-1, putative [Ricinus communis]
gi|223544728|gb|EEF46244.1| nucleolysin tia-1, putative [Ricinus communis]
Length = 358
Score = 593 bits (1529), Expect = e-167, Method: Compositional matrix adjust.
Identities = 286/367 (77%), Positives = 316/367 (86%), Gaps = 18/367 (4%)
Query: 1 MQHQRLKQQQQQQQQALMQQALLQQQSLYHPGLLAAPQIEPIPSGNLPPGFDPSTCRSVY 60
MQH RLKQQ A+M HP L+AAPQIEPI SGNLPPGFD +TCRSVY
Sbjct: 2 MQHHRLKQQ------AMMPYP--------HPALVAAPQIEPILSGNLPPGFDSTTCRSVY 47
Query: 61 VGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSSYGFIHYFDRRSAAMAILSLNGRHLF 120
VGNIH QVTEPLLQEVFS+TG +EGCKLIRK+KSSYGF+ YFDRRSAA++I++LNGRHLF
Sbjct: 48 VGNIHPQVTEPLLQEVFSNTGLIEGCKLIRKEKSSYGFVDYFDRRSAALSIVTLNGRHLF 107
Query: 121 GQPIKVNWAYASGQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTG 180
GQPIKVNWAYAS QREDTSGHFNIFVGDLSPEVTDATL+A F+++PSCSDARVMWDQKTG
Sbjct: 108 GQPIKVNWAYASSQREDTSGHFNIFVGDLSPEVTDATLYASFALFPSCSDARVMWDQKTG 167
Query: 181 RSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELT 240
RSRGFGFVSFRNQQDAQ+AIN+L GKW+GSRQIRCNWA KG +N+DKQSSDAKSVVELT
Sbjct: 168 RSRGFGFVSFRNQQDAQNAINELNGKWIGSRQIRCNWAAKGTTSNDDKQSSDAKSVVELT 227
Query: 241 NGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDK 300
NG+SED +E N +APENNPQYTTVYVGNLAPEVT +DLHRHF+ LGAG IE+VRVQRDK
Sbjct: 228 NGTSEDSQE-KNDDAPENNPQYTTVYVGNLAPEVTSVDLHRHFYGLGAGTIEDVRVQRDK 286
Query: 301 GFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSKPTPPGTSSNPLPPPAAAPIP 360
GFGFVRYSTHAEAALAIQMGN + L+GK +KCSWGSKPTPPGTSS PLPPPAA +P
Sbjct: 287 GFGFVRYSTHAEAALAIQMGN---ARILYGKPVKCSWGSKPTPPGTSSTPLPPPAAVRMP 343
Query: 361 GLSAADL 367
G L
Sbjct: 344 GFQLLSL 350
>gi|357479381|ref|XP_003609976.1| RNA-binding protein [Medicago truncatula]
gi|355511031|gb|AES92173.1| RNA-binding protein [Medicago truncatula]
Length = 415
Score = 591 bits (1524), Expect = e-166, Method: Compositional matrix adjust.
Identities = 284/385 (73%), Positives = 322/385 (83%), Gaps = 18/385 (4%)
Query: 15 QALMQQALLQQQSLY-HPGLLAAPQIEPIPSGNLPPGFDPSTCRSVYVGNIHTQVTEPLL 73
Q Q +++Q SLY HP L+ PQIEPI SGNLPPGFD STCRSVYVGNIH QV+EPLL
Sbjct: 4 QKFRQNPMIEQHSLYQHPALIT-PQIEPILSGNLPPGFDSSTCRSVYVGNIHPQVSEPLL 62
Query: 74 QEVFSSTGPVEGCKLIRKDKSSYGFIHYFDRRSAAMAILSLNGRHLFGQPIKVNWAYASG 133
QE+FSS G +EGCKLIRK+KSSYGF+ YFDR SAA+AI++LNGR++FGQ IKVNWAY G
Sbjct: 63 QELFSSAGALEGCKLIRKEKSSYGFVDYFDRSSAAIAIVTLNGRNIFGQSIKVNWAYTRG 122
Query: 134 QREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQ 193
QREDTSGHF+IFVGDLSPEVTDATL+ACFS Y SCSDARVMWDQKTGRSRGFGFVSFRNQ
Sbjct: 123 QREDTSGHFHIFVGDLSPEVTDATLYACFSAYSSCSDARVMWDQKTGRSRGFGFVSFRNQ 182
Query: 194 QDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNT 253
Q+AQSAINDLTGKWLGSRQIRCNWATKGA N + QSS++KSVVELT+G+SE+ +E T+
Sbjct: 183 QEAQSAINDLTGKWLGSRQIRCNWATKGANMNGENQSSESKSVVELTSGTSEEAQEMTSD 242
Query: 254 EAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEA 313
++PE NPQYTTVYVGNLAPEVT +DLH HFH+LG G IE+VRVQRDKGFGFVRYSTH EA
Sbjct: 243 DSPEKNPQYTTVYVGNLAPEVTSVDLHHHFHALGVGTIEDVRVQRDKGFGFVRYSTHGEA 302
Query: 314 ALAIQMGNTTQSSYLFGKQM-----------KCSWGSKPTPPGTSSNPLPPPAA--APIP 360
ALAIQMGNT +LFGK + KCSWGSKPTPPGT+S PLPPPA+ P+P
Sbjct: 303 ALAIQMGNT---RFLFGKPIKMHITRKKAVSKCSWGSKPTPPGTASTPLPPPASTHVPVP 359
Query: 361 GLSAADLLAYERQIAMSKMGGVHAL 385
G S A L YERQ+A+SKM HA+
Sbjct: 360 GFSPAGLALYERQLALSKMNEAHAV 384
>gi|224121456|ref|XP_002330832.1| predicted protein [Populus trichocarpa]
gi|222872634|gb|EEF09765.1| predicted protein [Populus trichocarpa]
Length = 415
Score = 580 bits (1496), Expect = e-163, Method: Compositional matrix adjust.
Identities = 283/400 (70%), Positives = 329/400 (82%), Gaps = 18/400 (4%)
Query: 29 YHPGLLAAP--QIEPIPSGNLPPGFDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGC 86
+HP L+AA Q+EPIP GNLPPGFD S+CRSVYVGNIH VT+ LL EVF++ GP+ GC
Sbjct: 6 HHPALVAAAMSQMEPIPGGNLPPGFDSSSCRSVYVGNIHVNVTDKLLAEVFATAGPLAGC 65
Query: 87 KLIRKDKSSYGFIHYFDRRSAAMAILSLNGRHLFGQPIKVNWAYASGQREDTSGHFNIFV 146
KLIRKDKSSYGF+ Y DR SAA+AI++L+GR L+G+ +KVNWAYASGQREDTSGHF+IFV
Sbjct: 66 KLIRKDKSSYGFVDYHDRSSAALAIMTLHGRQLYGEALKVNWAYASGQREDTSGHFHIFV 125
Query: 147 GDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGK 206
GDLSPEVTDATL+ACFSV+PSCSDARVMWD KTGRS+G+GFVSFRNQQ+AQSAINDLTGK
Sbjct: 126 GDLSPEVTDATLYACFSVFPSCSDARVMWDHKTGRSKGYGFVSFRNQQEAQSAINDLTGK 185
Query: 207 WLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVY 266
WLG+RQIRCNWATKG G+NEDKQ+SD ++ V LTNGSS +E TN EAPENNP YTTVY
Sbjct: 186 WLGNRQIRCNWATKGVGSNEDKQNSDNQNAVVLTNGSSAGSQENTNEEAPENNPAYTTVY 245
Query: 267 VGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSS 326
VGNL+ VTQ +LH +FH+LGAGVIEEVRVQRDKGFGFVRY+TH EAA AIQMGN
Sbjct: 246 VGNLSHVVTQAELHGNFHALGAGVIEEVRVQRDKGFGFVRYNTHEEAAFAIQMGN---GK 302
Query: 327 YLFGKQMKCSWGSKPTPPGTSSNPLPPPA----AAPIPGL----SAADLLAYERQIAMSK 378
+ GK MKCSWGSKPTPPGT+SNPLPPPA AP G+ SAADLLAY+RQ+A+S+
Sbjct: 303 IVCGKPMKCSWGSKPTPPGTASNPLPPPAQPYQIAPSTGINQGYSAADLLAYQRQLALSQ 362
Query: 379 MGGV----HALMHPQAQHPLKQAAMGVGSAGASQAIYDGF 414
AL+ QH L A+MG+ S+G SQA+YDG+
Sbjct: 363 AAASGLSGQALVQLTGQHGLSAASMGLSSSG-SQALYDGY 401
>gi|225429862|ref|XP_002283326.1| PREDICTED: nucleolysin TIAR [Vitis vinifera]
Length = 436
Score = 576 bits (1485), Expect = e-162, Method: Compositional matrix adjust.
Identities = 280/402 (69%), Positives = 323/402 (80%), Gaps = 19/402 (4%)
Query: 28 LYHPGLLAAP---QIEPIPSGNLPPGFDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVE 84
+YHPG+LAA Q+EP+PSGNLPPGFD S+CRSVYVGNIH VTE LL EVF S GP+
Sbjct: 26 MYHPGVLAAAAMSQMEPVPSGNLPPGFDSSSCRSVYVGNIHVNVTEKLLAEVFQSAGPLA 85
Query: 85 GCKLIRKDKSSYGFIHYFDRRSAAMAILSLNGRHLFGQPIKVNWAYASGQREDTSGHFNI 144
GCKLIRKDKSSYGF+ Y DR SA++AI++L+GR ++GQ +KVNWAYASGQREDTSGHFNI
Sbjct: 86 GCKLIRKDKSSYGFVDYLDRASASLAIMTLHGRQVYGQALKVNWAYASGQREDTSGHFNI 145
Query: 145 FVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLT 204
FVGDLSPEVTDATL+ACFSV+ SCSDARVMWD KTGRS+G+GFVSFRNQQDAQSAINDL+
Sbjct: 146 FVGDLSPEVTDATLYACFSVFASCSDARVMWDHKTGRSKGYGFVSFRNQQDAQSAINDLS 205
Query: 205 GKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTT 264
GKWLG+RQIRCNWATKGAG NEDKQ ++ ++ V LTNGSS+ +E TN EAPENNP YTT
Sbjct: 206 GKWLGNRQIRCNWATKGAGFNEDKQVNENQNAVVLTNGSSDGSQENTNEEAPENNPAYTT 265
Query: 265 VYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQ 324
VYVGNL+ EVTQ +LH FH+LGAGVIEEVR+QRDKGFGFVRY TH EAALAIQM N
Sbjct: 266 VYVGNLSHEVTQAELHCQFHALGAGVIEEVRIQRDKGFGFVRYHTHEEAALAIQMAN--- 322
Query: 325 SSYLFGKQMKCSWGSKPTPPGTSSNPLPPPA--------AAPIPGLSAADLLAYERQIAM 376
+ GK MKCSWGSKPTP GT+SNPLPPPA A G S A+LLAY+RQ+A+
Sbjct: 323 GRIVRGKSMKCSWGSKPTPLGTASNPLPPPAQPYQILPTAGINQGYSPAELLAYQRQLAL 382
Query: 377 SKMGGV----HALMHPQAQHPLKQAAMGVGSAGASQAIYDGF 414
S+ ALM H L +MGV S+G +QA+YDG+
Sbjct: 383 SQAAASSLSGQALMQMTGHHGLAAGSMGV-SSGGTQAMYDGY 423
>gi|255574179|ref|XP_002528005.1| nucleolysin tia-1, putative [Ricinus communis]
gi|223532631|gb|EEF34417.1| nucleolysin tia-1, putative [Ricinus communis]
Length = 417
Score = 567 bits (1461), Expect = e-159, Method: Compositional matrix adjust.
Identities = 277/407 (68%), Positives = 321/407 (78%), Gaps = 18/407 (4%)
Query: 22 LLQQQSLYHPGLLAAP--QIEPIPSGNLPPGFDPSTCRSVYVGNIHTQVTEPLLQEVFSS 79
L Q +YHPG+LAA Q+EPIPSGNLPPGFD S CRSVYVGNIH VTE LL EVF +
Sbjct: 2 LQQHHHMYHPGVLAAAMSQMEPIPSGNLPPGFDSSACRSVYVGNIHVNVTEKLLAEVFQT 61
Query: 80 TGPVEGCKLIRKDKSSYGFIHYFDRRSAAMAILSLNGRHLFGQPIKVNWAYASGQREDTS 139
GP+ GCKLIRKDKSSYGF+ Y DR AA+AI++L+GR L+GQ +KVNWAYA+ QREDTS
Sbjct: 62 AGPLAGCKLIRKDKSSYGFVDYHDRSCAAVAIMTLHGRQLYGQALKVNWAYANSQREDTS 121
Query: 140 GHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSA 199
GHF+IFVGDLSPEVTDATLFACFSVY SCSDARVMWD KTGRS+G+GFVSFRNQ++AQSA
Sbjct: 122 GHFHIFVGDLSPEVTDATLFACFSVYNSCSDARVMWDHKTGRSKGYGFVSFRNQREAQSA 181
Query: 200 INDLTGKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENN 259
INDL+GKWLG+RQIRCNWATKG+ +NEDKQ D ++ V LT+GSSE G+E N +APENN
Sbjct: 182 INDLSGKWLGNRQIRCNWATKGSASNEDKQIGDNQNAVILTSGSSEGGQENANEDAPENN 241
Query: 260 PQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQM 319
P YTTVYVGNL EVTQ +LH FH+LGAG+IEEVRVQRDKGFGFVRY+TH EAA AIQM
Sbjct: 242 PAYTTVYVGNLCHEVTQSELHCQFHTLGAGIIEEVRVQRDKGFGFVRYTTHEEAASAIQM 301
Query: 320 GNTTQSSYLFGKQMKCSWGSKPTPPGTSSNPLPP--------PAAAPIPGLSAADLLAYE 371
N + GK MKCSWGSKPTPPGT+SNPLPP P++ G SA DLL Y+
Sbjct: 302 AN---GKIVRGKPMKCSWGSKPTPPGTASNPLPPPIQPYQVLPSSGMNHGYSATDLLVYQ 358
Query: 372 RQIAMSKMGGV----HALMHPQAQHPLKQAAMGVGSAGASQAIYDGF 414
RQ+A+S+ AL+ QH L A+MG+ S G SQA+YDG+
Sbjct: 359 RQLALSQAAASGLSGQALVQLTGQHGLAAASMGLNS-GGSQALYDGY 404
>gi|296081803|emb|CBI20808.3| unnamed protein product [Vitis vinifera]
Length = 397
Score = 563 bits (1451), Expect = e-158, Method: Compositional matrix adjust.
Identities = 272/388 (70%), Positives = 313/388 (80%), Gaps = 16/388 (4%)
Query: 39 IEPIPSGNLPPGFDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSSYGF 98
+EP+PSGNLPPGFD S+CRSVYVGNIH VTE LL EVF S GP+ GCKLIRKDKSSYGF
Sbjct: 1 MEPVPSGNLPPGFDSSSCRSVYVGNIHVNVTEKLLAEVFQSAGPLAGCKLIRKDKSSYGF 60
Query: 99 IHYFDRRSAAMAILSLNGRHLFGQPIKVNWAYASGQREDTSGHFNIFVGDLSPEVTDATL 158
+ Y DR SA++AI++L+GR ++GQ +KVNWAYASGQREDTSGHFNIFVGDLSPEVTDATL
Sbjct: 61 VDYLDRASASLAIMTLHGRQVYGQALKVNWAYASGQREDTSGHFNIFVGDLSPEVTDATL 120
Query: 159 FACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWA 218
+ACFSV+ SCSDARVMWD KTGRS+G+GFVSFRNQQDAQSAINDL+GKWLG+RQIRCNWA
Sbjct: 121 YACFSVFASCSDARVMWDHKTGRSKGYGFVSFRNQQDAQSAINDLSGKWLGNRQIRCNWA 180
Query: 219 TKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLD 278
TKGAG NEDKQ ++ ++ V LTNGSS+ +E TN EAPENNP YTTVYVGNL+ EVTQ +
Sbjct: 181 TKGAGFNEDKQVNENQNAVVLTNGSSDGSQENTNEEAPENNPAYTTVYVGNLSHEVTQAE 240
Query: 279 LHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWG 338
LH FH+LGAGVIEEVR+QRDKGFGFVRY TH EAALAIQM N + GK MKCSWG
Sbjct: 241 LHCQFHALGAGVIEEVRIQRDKGFGFVRYHTHEEAALAIQMAN---GRIVRGKSMKCSWG 297
Query: 339 SKPTPPGTSSNPLPPPA--------AAPIPGLSAADLLAYERQIAMSKMGGV----HALM 386
SKPTP GT+SNPLPPPA A G S A+LLAY+RQ+A+S+ ALM
Sbjct: 298 SKPTPLGTASNPLPPPAQPYQILPTAGINQGYSPAELLAYQRQLALSQAAASSLSGQALM 357
Query: 387 HPQAQHPLKQAAMGVGSAGASQAIYDGF 414
H L +MGV S+G +QA+YDG+
Sbjct: 358 QMTGHHGLAAGSMGV-SSGGTQAMYDGY 384
>gi|356515545|ref|XP_003526460.1| PREDICTED: nucleolysin TIAR-like [Glycine max]
Length = 435
Score = 563 bits (1451), Expect = e-158, Method: Compositional matrix adjust.
Identities = 277/402 (68%), Positives = 327/402 (81%), Gaps = 21/402 (5%)
Query: 29 YHPGLLAAP--QIEPIPSGNLPPGFDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGC 86
YHPG+LAA Q+EP+PSGNLPPGFD S CRSVYVGNIH VT+ LL EVF S GP+ GC
Sbjct: 26 YHPGMLAAAMSQMEPVPSGNLPPGFDTSACRSVYVGNIHVNVTDKLLAEVFQSAGPLAGC 85
Query: 87 KLIRKDKSSYGFIHYFDRRSAAMAILSLNGRHLFGQPIKVNWAYASGQREDTSGHFNIFV 146
KLIRK+KSSYGF+ Y DR SAA+AI++L+GR L+GQ +KVNWAYA+ REDT+GHFNIFV
Sbjct: 86 KLIRKEKSSYGFVDYHDRASAALAIMTLHGRQLYGQALKVNWAYANSSREDTTGHFNIFV 145
Query: 147 GDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGK 206
GDLSPEVTDATLFACFSVYPSCSDARVMWD KTGRS+G+GFVSFR+ QDAQSAIND+TGK
Sbjct: 146 GDLSPEVTDATLFACFSVYPSCSDARVMWDHKTGRSKGYGFVSFRDHQDAQSAINDMTGK 205
Query: 207 WLGSRQIRCNWATKGAG--NNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTT 264
WLG+RQIRCNWATKGAG +NE+K ++D+++ V LTNGSS+ G++ N +APENNP YTT
Sbjct: 206 WLGNRQIRCNWATKGAGGSSNEEK-NNDSQNAVMLTNGSSDGGQDNNNEDAPENNPSYTT 264
Query: 265 VYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQ 324
VYVGNL +VTQ +LH FH+LGAGVIEEVRVQRDKGFGF+RY+TH EAALAIQM N
Sbjct: 265 VYVGNLPHDVTQAELHCQFHALGAGVIEEVRVQRDKGFGFIRYNTHDEAALAIQMAN--- 321
Query: 325 SSYLFGKQMKCSWGSKPTPPGTSSNPLPPPA--------AAPIPGLSAADLLAYERQIAM 376
+ GK MKCSWGSKPTPPGT+SNPLPPPA A G S A+LLAY+RQ+A+
Sbjct: 322 GRLVRGKNMKCSWGSKPTPPGTASNPLPPPAQPYQILPTAGMNQGYSPAELLAYQRQLAL 381
Query: 377 SK--MGGV--HALMHPQAQHPLKQAAMGVGSAGASQAIYDGF 414
S+ + G+ AL+ QH L A+MG+ S GASQA+YDG+
Sbjct: 382 SQAAVSGLSGQALLQMTGQHGLAPASMGINS-GASQAMYDGY 422
>gi|297738530|emb|CBI27775.3| unnamed protein product [Vitis vinifera]
Length = 375
Score = 561 bits (1446), Expect = e-157, Method: Compositional matrix adjust.
Identities = 265/306 (86%), Positives = 285/306 (93%), Gaps = 3/306 (0%)
Query: 29 YHPGLLAAPQIEPIPSGNLPPGFDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKL 88
+HPGLLA PQIEPI SGNLPPGFD STCRSVYVGNIH QVTEPLLQEVFSSTGP+EGCKL
Sbjct: 26 HHPGLLAPPQIEPILSGNLPPGFDSSTCRSVYVGNIHPQVTEPLLQEVFSSTGPLEGCKL 85
Query: 89 IRKDKSSYGFIHYFDRRSAAMAILSLNGRHLFGQPIKVNWAYASGQREDTSGHFNIFVGD 148
IRK+KSSYGF+ YFDRRSAA++I++LNGRHLFGQPIKVNWAYAS QREDTSGH+NIFVGD
Sbjct: 86 IRKEKSSYGFVDYFDRRSAALSIVTLNGRHLFGQPIKVNWAYASSQREDTSGHYNIFVGD 145
Query: 149 LSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWL 208
LSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQ+AQSAINDL G+WL
Sbjct: 146 LSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQEAQSAINDLNGRWL 205
Query: 209 GSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVG 268
GSRQIRCNWATKGAG NEDK +SDAKSVVELTNG+SEDGK+ +N EAPENN QYTTVYVG
Sbjct: 206 GSRQIRCNWATKGAGGNEDKPNSDAKSVVELTNGTSEDGKDKSNDEAPENNLQYTTVYVG 265
Query: 269 NLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYL 328
NLAPEVT +DLHRHFH+LGAG IE+VRVQRDKGFGFVRYSTHAEAALAIQMGN + L
Sbjct: 266 NLAPEVTSVDLHRHFHALGAGAIEDVRVQRDKGFGFVRYSTHAEAALAIQMGN---ARIL 322
Query: 329 FGKQMK 334
GK +K
Sbjct: 323 CGKPIK 328
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 94/208 (45%), Gaps = 43/208 (20%)
Query: 137 DTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDA 196
D+S +++VG++ P+VT+ L FS +++ +K+ +GFV + +++ A
Sbjct: 49 DSSTCRSVYVGNIHPQVTEPLLQEVFSSTGPLEGCKLIRKEKSS----YGFVDYFDRRSA 104
Query: 197 QSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAP 256
+I L G+ L + I+ NWA A S E T+G
Sbjct: 105 ALSIVTLNGRHLFGQPIKVNWAY-------------ASSQREDTSG-------------- 137
Query: 257 ENNPQYTTVYVGNLAPEVTQLDLHRHFHSL----GAGVIEEVRVQRDKGFGFVRYSTHAE 312
+ ++VG+L+PEVT L F A V+ + + R +GFGFV + E
Sbjct: 138 -----HYNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQE 192
Query: 313 AALAIQMGNTTQSSYLFGKQMKCSWGSK 340
A AI N +L +Q++C+W +K
Sbjct: 193 AQSAI---NDLNGRWLGSRQIRCNWATK 217
>gi|255647186|gb|ACU24061.1| unknown [Glycine max]
Length = 435
Score = 560 bits (1442), Expect = e-157, Method: Compositional matrix adjust.
Identities = 275/402 (68%), Positives = 326/402 (81%), Gaps = 21/402 (5%)
Query: 29 YHPGLLAAP--QIEPIPSGNLPPGFDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGC 86
YHPG+LAA Q+EP+PSGNLPPGFD S CRSVYVGNIH VT+ LL EVF S GP+ GC
Sbjct: 26 YHPGMLAAAMSQVEPVPSGNLPPGFDTSACRSVYVGNIHVNVTDKLLAEVFQSAGPLAGC 85
Query: 87 KLIRKDKSSYGFIHYFDRRSAAMAILSLNGRHLFGQPIKVNWAYASGQREDTSGHFNIFV 146
KLIRK+KSSYGF+ Y DR SAA+AI++L+GR L+GQ +KVNWAYA+ REDT+GHFNIFV
Sbjct: 86 KLIRKEKSSYGFVDYHDRASAALAIMTLHGRQLYGQALKVNWAYANSSREDTTGHFNIFV 145
Query: 147 GDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGK 206
GDLSPEVTDATLFACFSVYPSCSDARVMWD KTGRS+G+GFVSFR+ QDAQSAIND+TGK
Sbjct: 146 GDLSPEVTDATLFACFSVYPSCSDARVMWDHKTGRSKGYGFVSFRDHQDAQSAINDMTGK 205
Query: 207 WLGSRQIRCNWATKGAG--NNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTT 264
WLG+RQIRCNWATKGAG +NE+K ++D+++ V LTNGSS+ G++ N +APENNP YTT
Sbjct: 206 WLGNRQIRCNWATKGAGGSSNEEK-NNDSQNAVMLTNGSSDGGQDNNNEDAPENNPSYTT 264
Query: 265 VYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQ 324
VYVGNL +VTQ +LH FH+LGAGVIEEVRVQRDKGFGF+RY+TH EAALAIQM N
Sbjct: 265 VYVGNLPHDVTQAELHCQFHALGAGVIEEVRVQRDKGFGFIRYNTHDEAALAIQMAN--- 321
Query: 325 SSYLFGKQMKCSWGSKPTPPGTSSNPLPPPA--------AAPIPGLSAADLLAYERQIAM 376
+ GK MKCSWGSKPTPPGT+SNPLPPPA A G S A+LLAY+RQ+A+
Sbjct: 322 GRLVRGKNMKCSWGSKPTPPGTASNPLPPPAQPYQILPTAGMNQGYSPAELLAYQRQLAL 381
Query: 377 SK--MGGV--HALMHPQAQHPLKQAAMGVGSAGASQAIYDGF 414
S+ + G+ A + QH L A+MG+ + GASQA+YDG+
Sbjct: 382 SQAAVSGLSGQAFLQMTGQHGLAPASMGI-NFGASQAMYDGY 422
>gi|255642249|gb|ACU21389.1| unknown [Glycine max]
Length = 452
Score = 559 bits (1441), Expect = e-157, Method: Compositional matrix adjust.
Identities = 274/401 (68%), Positives = 324/401 (80%), Gaps = 19/401 (4%)
Query: 29 YHPGLLAAP--QIEPIPSGNLPPGFDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGC 86
YHPG+LAA Q+EP+PSGN+PPGFD S CRSVYVGNIH VT+ LL EVF S GP+ GC
Sbjct: 25 YHPGMLAAAMSQMEPVPSGNVPPGFDTSACRSVYVGNIHVNVTDKLLAEVFQSAGPLAGC 84
Query: 87 KLIRKDKSSYGFIHYFDRRSAAMAILSLNGRHLFGQPIKVNWAYASGQREDTSGHFNIFV 146
KLIRK+KSSYGF+ Y DR SAA+AI++L+GR L+GQ +KVNWAYA+ REDTSGHFNIFV
Sbjct: 85 KLIRKEKSSYGFVDYHDRASAALAIMTLHGRQLYGQALKVNWAYANSSREDTSGHFNIFV 144
Query: 147 GDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGK 206
GDLSPEVTDATLFACFSVYPSCSDARVMWD KTGRS+G+GFVSFR+ QDAQSAIND+TGK
Sbjct: 145 GDLSPEVTDATLFACFSVYPSCSDARVMWDHKTGRSKGYGFVSFRDHQDAQSAINDMTGK 204
Query: 207 WLGSRQIRCNWATKGAGNNEDKQS-SDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTV 265
WLG+RQIRCNWATKGAG + +++ +D+++ V LTNGSS+ G++ N +AP+NNP YTTV
Sbjct: 205 WLGNRQIRCNWATKGAGGSSNEEKINDSQNAVVLTNGSSDGGQDNNNEDAPDNNPSYTTV 264
Query: 266 YVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQS 325
YVGNL +VTQ +LH FH+LGAGVIEEVRVQRDKGFGFVRY+TH EAALAIQM N
Sbjct: 265 YVGNLPHDVTQAELHCQFHALGAGVIEEVRVQRDKGFGFVRYNTHDEAALAIQMAN---G 321
Query: 326 SYLFGKQMKCSWGSKPTPPGTSSNPLPPPA--------AAPIPGLSAADLLAYERQIAMS 377
+ GK MKCSWGSKPTPPGT+SNPLPPPA A G S A+LLAY+RQ+A+S
Sbjct: 322 RLVRGKNMKCSWGSKPTPPGTASNPLPPPAQPYQILPTAGMNQGYSPAELLAYQRQLALS 381
Query: 378 K--MGGV--HALMHPQAQHPLKQAAMGVGSAGASQAIYDGF 414
+ + G+ L+ QH L A+MGV S GASQA+YDG+
Sbjct: 382 QAAVSGLSGQTLLQMTGQHGLAPASMGVNS-GASQAMYDGY 421
>gi|224115710|ref|XP_002332123.1| predicted protein [Populus trichocarpa]
gi|222874943|gb|EEF12074.1| predicted protein [Populus trichocarpa]
Length = 425
Score = 558 bits (1438), Expect = e-156, Method: Compositional matrix adjust.
Identities = 278/416 (66%), Positives = 329/416 (79%), Gaps = 22/416 (5%)
Query: 17 LMQQALLQQQSLYH-PGLLAAP--QIEPIPSGNLPPGFDPST-CRSVYVGNIHTQVTEPL 72
+ QQALLQ +YH P L+A+ Q+EPI GNLPP FDPS+ CR VYVGNIH VT+ L
Sbjct: 1 MQQQALLQHHHMYHHPALVASAMSQMEPILGGNLPPAFDPSSSCRRVYVGNIHVNVTDKL 60
Query: 73 LQEVFSSTGPVEGCKLIRKDKSSYGFIHYFDRRSAAMAILSLNGRHLFGQPIKVNWAYAS 132
L EVF++ GP+ GCKLIRKDKSSYGF+ Y D+ SAA+AI++L+GR L+GQ +KVNWAY +
Sbjct: 61 LAEVFATAGPLAGCKLIRKDKSSYGFVDYHDQSSAALAIMTLHGRQLYGQALKVNWAYGN 120
Query: 133 GQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRN 192
QREDTSGHF++FVGDLSPEV DA LFACFSV+PSCS+ARVMWD KTGRS+G+GFVSFRN
Sbjct: 121 SQREDTSGHFHVFVGDLSPEVIDANLFACFSVFPSCSNARVMWDHKTGRSKGYGFVSFRN 180
Query: 193 QQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTN 252
QQ+AQSAINDLTGKWLG+RQIRCNWATKG +NEDKQ+SD ++ V LTNGSSE G+E+TN
Sbjct: 181 QQEAQSAINDLTGKWLGNRQIRCNWATKGVESNEDKQNSDNQNAVVLTNGSSEGGQESTN 240
Query: 253 TEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAE 312
EAPENNP YTTVYVGNL+ EVTQ +LHRHFH+LGAGVIE+VRVQRDKGFGFVRY+TH E
Sbjct: 241 EEAPENNPAYTTVYVGNLSHEVTQAELHRHFHALGAGVIEDVRVQRDKGFGFVRYNTHEE 300
Query: 313 AALAIQMGNTTQSSYLFGKQMKCSWGSKPTPPGTSSNPLP----------PPAAAPIPGL 362
AA AIQ GN + GK +KCSWGSKPTPPGT+SNPLP P+ G
Sbjct: 301 AASAIQTGN---GKIVCGKPVKCSWGSKPTPPGTASNPLPPPPPAQPYQIAPSTGINQGY 357
Query: 363 SAADLLAYERQIAMSKMGGV----HALMHPQAQHPLKQAAMGVGSAGASQAIYDGF 414
SAADLLAY+RQ+A+S+ AL+ QH L A+M + SAG SQA+YDG+
Sbjct: 358 SAADLLAYQRQLALSQAAASGLSGQALLQLAGQHGLAAASMDL-SAGGSQAMYDGY 412
>gi|413920410|gb|AFW60342.1| nucleolysin TIAR [Zea mays]
Length = 447
Score = 556 bits (1434), Expect = e-156, Method: Compositional matrix adjust.
Identities = 294/387 (75%), Positives = 320/387 (82%), Gaps = 13/387 (3%)
Query: 30 HPGLLAAPQIEPIPSGNLPPGFDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLI 89
HPGLLAAPQIEPI SGNLPPGFD STCRSVYVGNIH QVT+ +LQEVF S GPVEGCKLI
Sbjct: 48 HPGLLAAPQIEPIVSGNLPPGFDSSTCRSVYVGNIHLQVTDTVLQEVFQSIGPVEGCKLI 107
Query: 90 RKDKSSYGFIHYFDRRSAAMAILSLNGRHLFGQPIKVNWAYASGQREDTSGHFNIFVGDL 149
RK+KSS+GFI Y+DRR AA+AILSLNGR L+GQPIKVNWAY S REDTSGHFNIFVGDL
Sbjct: 108 RKEKSSFGFIDYYDRRYAALAILSLNGRQLYGQPIKVNWAYTSTPREDTSGHFNIFVGDL 167
Query: 150 SPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLG 209
PEVTDATLFA FS Y +CSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDL GKWLG
Sbjct: 168 CPEVTDATLFAFFSGYSTCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLNGKWLG 227
Query: 210 SRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGN 269
+RQIRCNWATKGA E+KQ D K V+L+NGSSE GKE N + PENNPQ+TTVYVGN
Sbjct: 228 NRQIRCNWATKGANAGEEKQILDTK--VDLSNGSSESGKENPNEDGPENNPQFTTVYVGN 285
Query: 270 LAPEVTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLF 329
L E T D+H FHSLGAG IEEVRV RDKGFGFVRYSTH EAALAIQMGN +
Sbjct: 286 LPHEATMNDVHLFFHSLGAGSIEEVRVTRDKGFGFVRYSTHEEAALAIQMGN---GQLIG 342
Query: 330 GKQMKCSWGSKPTPPGTSSNPLPPPAAAPIP-GLSAADLLAYERQIAMSKMGGVH-ALMH 387
G+Q+KCSWGSKPTP GT+S PLPPPA AP G+SA DLLAY+R +A+SKM H ALM
Sbjct: 343 GRQIKCSWGSKPTPQGTASLPLPPPALAPFSTGVSATDLLAYQR-LALSKMASNHPALM- 400
Query: 388 PQAQHPLKQ-AAMGVGSAGASQAIYDG 413
QH LKQ AA+G+G GASQ+IYDG
Sbjct: 401 --GQHSLKQVAALGIG-GGASQSIYDG 424
>gi|357466549|ref|XP_003603559.1| RNA-binding protein [Medicago truncatula]
gi|355492607|gb|AES73810.1| RNA-binding protein [Medicago truncatula]
Length = 440
Score = 555 bits (1429), Expect = e-155, Method: Compositional matrix adjust.
Identities = 270/403 (66%), Positives = 327/403 (81%), Gaps = 21/403 (5%)
Query: 29 YHPGLLAAP---QIEPIPSGNLPPGFDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEG 85
+HPG+LAA Q+EP+PSGNLPPGFD S CRSVYVGNIH VT+ LL EVF S GP+ G
Sbjct: 29 HHPGMLAAAAMTQMEPVPSGNLPPGFDASACRSVYVGNIHVNVTDKLLAEVFQSAGPLAG 88
Query: 86 CKLIRKDKSSYGFIHYFDRRSAAMAILSLNGRHLFGQPIKVNWAYASGQREDTSGHFNIF 145
CKLIRK+KSSYGF+ Y DR SAA+AI++L+GR L+GQ +KVNWAYA+ REDTSGHFN+F
Sbjct: 89 CKLIRKEKSSYGFVDYHDRASAALAIMTLHGRQLYGQALKVNWAYANSSREDTSGHFNVF 148
Query: 146 VGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTG 205
VGDLSPEVTDATLFACFSVY +CSDARVMWD KTGRS+G+GFVSFR+ QDAQSAIND+TG
Sbjct: 149 VGDLSPEVTDATLFACFSVYTTCSDARVMWDHKTGRSKGYGFVSFRDHQDAQSAINDMTG 208
Query: 206 KWLGSRQIRCNWATKGAGNNEDKQS-SDAKSVVELTNGSSEDGKETTNTEAPENNPQYTT 264
KWLG+RQIRCNWATKGAG + +++ +D+++ V LTNGSS+ G++ +N +APENNP YTT
Sbjct: 209 KWLGNRQIRCNWATKGAGGSSNEEKINDSQNAVVLTNGSSDGGQDNSNEDAPENNPSYTT 268
Query: 265 VYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQ 324
VYVGNL +VTQ +LH FH+LGAGV+EEVRVQ KGFGFVRY+TH EAA+AIQM N
Sbjct: 269 VYVGNLPHDVTQAELHCQFHALGAGVLEEVRVQSGKGFGFVRYNTHEEAAMAIQMANGRP 328
Query: 325 SSYLFGKQMKCSWGSKPTPPGTSSNPLPPPAAAP---IP------GLSAADLLAYERQIA 375
+ GK MKCSWGSKPTPPGT+SNPLPPPAA P +P G +AA+LLAY+RQ+A
Sbjct: 329 ---VRGKTMKCSWGSKPTPPGTASNPLPPPAAQPYQILPTAGMNQGYTAAELLAYQRQLA 385
Query: 376 MSK--MGGV--HALMHPQAQHPLKQAAMGVGSAGASQAIYDGF 414
+S+ + G+ AL+ QH L A+MG+ SA ASQA+YDG+
Sbjct: 386 LSQAAVSGLSGQALLQMSGQHGLAPASMGINSA-ASQAMYDGY 427
>gi|357466551|ref|XP_003603560.1| RNA-binding protein [Medicago truncatula]
gi|355492608|gb|AES73811.1| RNA-binding protein [Medicago truncatula]
Length = 414
Score = 555 bits (1429), Expect = e-155, Method: Compositional matrix adjust.
Identities = 270/403 (66%), Positives = 327/403 (81%), Gaps = 21/403 (5%)
Query: 29 YHPGLLAAP---QIEPIPSGNLPPGFDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEG 85
+HPG+LAA Q+EP+PSGNLPPGFD S CRSVYVGNIH VT+ LL EVF S GP+ G
Sbjct: 3 HHPGMLAAAAMTQMEPVPSGNLPPGFDASACRSVYVGNIHVNVTDKLLAEVFQSAGPLAG 62
Query: 86 CKLIRKDKSSYGFIHYFDRRSAAMAILSLNGRHLFGQPIKVNWAYASGQREDTSGHFNIF 145
CKLIRK+KSSYGF+ Y DR SAA+AI++L+GR L+GQ +KVNWAYA+ REDTSGHFN+F
Sbjct: 63 CKLIRKEKSSYGFVDYHDRASAALAIMTLHGRQLYGQALKVNWAYANSSREDTSGHFNVF 122
Query: 146 VGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTG 205
VGDLSPEVTDATLFACFSVY +CSDARVMWD KTGRS+G+GFVSFR+ QDAQSAIND+TG
Sbjct: 123 VGDLSPEVTDATLFACFSVYTTCSDARVMWDHKTGRSKGYGFVSFRDHQDAQSAINDMTG 182
Query: 206 KWLGSRQIRCNWATKGAGNNEDKQS-SDAKSVVELTNGSSEDGKETTNTEAPENNPQYTT 264
KWLG+RQIRCNWATKGAG + +++ +D+++ V LTNGSS+ G++ +N +APENNP YTT
Sbjct: 183 KWLGNRQIRCNWATKGAGGSSNEEKINDSQNAVVLTNGSSDGGQDNSNEDAPENNPSYTT 242
Query: 265 VYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQ 324
VYVGNL +VTQ +LH FH+LGAGV+EEVRVQ KGFGFVRY+TH EAA+AIQM N
Sbjct: 243 VYVGNLPHDVTQAELHCQFHALGAGVLEEVRVQSGKGFGFVRYNTHEEAAMAIQMANGRP 302
Query: 325 SSYLFGKQMKCSWGSKPTPPGTSSNPLPPPAAAP---IP------GLSAADLLAYERQIA 375
+ GK MKCSWGSKPTPPGT+SNPLPPPAA P +P G +AA+LLAY+RQ+A
Sbjct: 303 ---VRGKTMKCSWGSKPTPPGTASNPLPPPAAQPYQILPTAGMNQGYTAAELLAYQRQLA 359
Query: 376 MSK--MGGV--HALMHPQAQHPLKQAAMGVGSAGASQAIYDGF 414
+S+ + G+ AL+ QH L A+MG+ SA ASQA+YDG+
Sbjct: 360 LSQAAVSGLSGQALLQMSGQHGLAPASMGINSA-ASQAMYDGY 401
>gi|115486297|ref|NP_001068292.1| Os11g0620100 [Oryza sativa Japonica Group]
gi|77551976|gb|ABA94773.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|113645514|dbj|BAF28655.1| Os11g0620100 [Oryza sativa Japonica Group]
gi|215767783|dbj|BAH00012.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218186124|gb|EEC68551.1| hypothetical protein OsI_36864 [Oryza sativa Indica Group]
gi|222616351|gb|EEE52483.1| hypothetical protein OsJ_34666 [Oryza sativa Japonica Group]
Length = 441
Score = 540 bits (1392), Expect = e-151, Method: Compositional matrix adjust.
Identities = 281/380 (73%), Positives = 311/380 (81%), Gaps = 6/380 (1%)
Query: 35 AAPQIEPIPSGNLPPGFDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKS 94
AAPQIEPI SGNLPPGFD STCRSVYVGNIH QVT+ LL EVF S GPVEGCKLIRK+KS
Sbjct: 57 AAPQIEPIVSGNLPPGFDSSTCRSVYVGNIHLQVTDSLLHEVFQSIGPVEGCKLIRKEKS 116
Query: 95 SYGFIHYFDRRSAAMAILSLNGRHLFGQPIKVNWAYASGQREDTSGHFNIFVGDLSPEVT 154
S+GF+ Y+DRRSAA+AI+SLNGR LFGQPIKVNWAYAS QREDTSGHFNIFVGDL PEVT
Sbjct: 117 SFGFVDYYDRRSAAIAIVSLNGRQLFGQPIKVNWAYASTQREDTSGHFNIFVGDLCPEVT 176
Query: 155 DATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIR 214
DA LFA F+ + SCSDARVMWDQKTGRSRGFGFVSFRNQQDAQ+AIN+L GKWLG+RQ+R
Sbjct: 177 DAALFAFFAGFTSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQNAINELNGKWLGNRQVR 236
Query: 215 CNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEV 274
CNWATKGA E+KQ++D+K ++ELTNGSSE GK+ N + PENNPQYTTVYVGNL +V
Sbjct: 237 CNWATKGANAGEEKQNTDSKGMIELTNGSSEGGKDNANEDGPENNPQYTTVYVGNLPHDV 296
Query: 275 TQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMK 334
D+HR FHSLG G IEEVRV RDKGFGFVRYSTH EAALAIQ GN + G+Q+K
Sbjct: 297 NSNDVHRFFHSLGVGSIEEVRVTRDKGFGFVRYSTHEEAALAIQTGN---GQLIGGRQIK 353
Query: 335 CSWGSKPTPPGT-SSNPLPPPAAAPIPGLSAADLLAYERQIAMSKMGGVHALMHPQAQHP 393
CSWGSKPTPPGT S+ PP A PG+SA DLLAYER +A+SKM ALM A
Sbjct: 354 CSWGSKPTPPGTASAPLPPPAPAPFNPGMSATDLLAYERTLALSKMAANPALMSQHA--A 411
Query: 394 LKQAAMGVGSAGASQAIYDG 413
LKQAA AGASQAIYDG
Sbjct: 412 LKQAAAMGMGAGASQAIYDG 431
>gi|115473341|ref|NP_001060269.1| Os07g0615400 [Oryza sativa Japonica Group]
gi|23237933|dbj|BAC16506.1| putative oligouridylate binding protein [Oryza sativa Japonica
Group]
gi|113611805|dbj|BAF22183.1| Os07g0615400 [Oryza sativa Japonica Group]
gi|215737207|dbj|BAG96136.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215767365|dbj|BAG99593.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222637457|gb|EEE67589.1| hypothetical protein OsJ_25126 [Oryza sativa Japonica Group]
Length = 427
Score = 539 bits (1388), Expect = e-150, Method: Compositional matrix adjust.
Identities = 280/375 (74%), Positives = 315/375 (84%), Gaps = 9/375 (2%)
Query: 38 QIEPIPSGNLPPGFDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSSYG 97
QIEPI +GNLPPGFD STCRSVYVGN+H QVTE LL+EVF STG VEGCKLIRK+KSSYG
Sbjct: 46 QIEPILTGNLPPGFDTSTCRSVYVGNVHVQVTEALLREVFQSTGLVEGCKLIRKEKSSYG 105
Query: 98 FIHYFDRRSAAMAILSLNGRHLFGQPIKVNWAYASGQREDTSGHFNIFVGDLSPEVTDAT 157
F+ Y+DRRSAA++IL+LNG+ +FGQ I+VNWAYASGQREDT+ HFNIFVGDLSPEVTD+
Sbjct: 106 FVDYYDRRSAALSILTLNGKQIFGQLIRVNWAYASGQREDTTDHFNIFVGDLSPEVTDSA 165
Query: 158 LFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNW 217
LFA FS Y SCSDARVMWDQKTGRSRG+GFVSFRNQQDAQSAINDL G+WLGSRQIRCNW
Sbjct: 166 LFAFFSGYSSCSDARVMWDQKTGRSRGYGFVSFRNQQDAQSAINDLNGQWLGSRQIRCNW 225
Query: 218 ATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQL 277
ATKGA N E +Q+SD+K+V +LTN +EDGKE N +APENNPQY TVYVGNLA EVTQ
Sbjct: 226 ATKGASNGE-QQTSDSKNVADLTNNLTEDGKEKANEDAPENNPQYRTVYVGNLAHEVTQD 284
Query: 278 DLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSW 337
LHR FH+LGAG IEEVR+Q KGFGFVRYS HAEAALAIQMGN L GK +KCSW
Sbjct: 285 VLHRLFHALGAGAIEEVRIQLGKGFGFVRYSNHAEAALAIQMGN---GRILGGKPIKCSW 341
Query: 338 GSKPTPPGTSSNPLPPPAAAPIPGLSAADLLAYERQIAMSKMGGVHALMHPQAQHPLKQA 397
G+KPTPPGT+S PLPPPAA + +AADLL Y+R +A+SKM ALM QAQ LKQ
Sbjct: 342 GNKPTPPGTTSAPLPPPAAPSV---TAADLLEYQRSLALSKMVSSQALMQAQAQQHLKQ- 397
Query: 398 AMGVGSAGASQAIYD 412
AMG+G AG SQA+YD
Sbjct: 398 AMGMG-AGVSQAMYD 411
>gi|218200015|gb|EEC82442.1| hypothetical protein OsI_26865 [Oryza sativa Indica Group]
Length = 427
Score = 538 bits (1386), Expect = e-150, Method: Compositional matrix adjust.
Identities = 279/375 (74%), Positives = 314/375 (83%), Gaps = 9/375 (2%)
Query: 38 QIEPIPSGNLPPGFDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSSYG 97
QIEPI +GNLPPGFD STCRSVYVGN+H QVTE LL+EVF STG VEGCKLIRK+KSSYG
Sbjct: 46 QIEPILTGNLPPGFDTSTCRSVYVGNVHVQVTEALLREVFQSTGLVEGCKLIRKEKSSYG 105
Query: 98 FIHYFDRRSAAMAILSLNGRHLFGQPIKVNWAYASGQREDTSGHFNIFVGDLSPEVTDAT 157
F+ Y+DRRSAA+AIL+LNG+ +FGQ I+VNWAYASGQREDT+ HFNIFVGDLSPEVTD+
Sbjct: 106 FVDYYDRRSAALAILTLNGKQIFGQLIRVNWAYASGQREDTTDHFNIFVGDLSPEVTDSA 165
Query: 158 LFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNW 217
LFA FS Y SCSDARVMWDQKTGRSRG+GFVSFRNQQDAQSAINDL G+WLGSRQIRCNW
Sbjct: 166 LFAFFSGYSSCSDARVMWDQKTGRSRGYGFVSFRNQQDAQSAINDLNGQWLGSRQIRCNW 225
Query: 218 ATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQL 277
ATKGA N E +Q+SD+K+V +LTN +EDGKE N + PENNPQY TVYVGNLA EVTQ
Sbjct: 226 ATKGASNGE-QQTSDSKNVADLTNNLTEDGKEKANEDVPENNPQYRTVYVGNLAHEVTQD 284
Query: 278 DLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSW 337
LHR FH+LGAG IEEVR+Q KGFGFVRYS+H EAALAIQMGN L GK +KCSW
Sbjct: 285 VLHRLFHALGAGAIEEVRIQLGKGFGFVRYSSHTEAALAIQMGN---GRILGGKPIKCSW 341
Query: 338 GSKPTPPGTSSNPLPPPAAAPIPGLSAADLLAYERQIAMSKMGGVHALMHPQAQHPLKQA 397
G+KPTPPGT+S PLPPPAA + +AADLL Y+R +A+SKM ALM QAQ LKQ
Sbjct: 342 GNKPTPPGTTSAPLPPPAAPSV---TAADLLEYQRSLALSKMVSSQALMQAQAQQHLKQ- 397
Query: 398 AMGVGSAGASQAIYD 412
AMG+G AG SQA+YD
Sbjct: 398 AMGMG-AGVSQAMYD 411
>gi|326524289|dbj|BAK00528.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 429
Score = 533 bits (1373), Expect = e-149, Method: Compositional matrix adjust.
Identities = 277/388 (71%), Positives = 321/388 (82%), Gaps = 12/388 (3%)
Query: 29 YHPGLLAAP--QIEPIPSGNLPPGFDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGC 86
+H L AAP QIEPI +GNLPPGFD STCRSVYVGNIH QVTE LL+EVF S G V+GC
Sbjct: 31 HHHLLGAAPPQQIEPILTGNLPPGFDTSTCRSVYVGNIHVQVTEALLREVFQSAGSVDGC 90
Query: 87 KLIRKDKSSYGFIHYFDRRSAAMAILSLNGRHLFGQPIKVNWAYASGQREDTSGHFNIFV 146
KLIRK+KSSYGF+ Y++R SAA+AIL+LNG+ +FGQPI+VNWAYASGQREDT+ HF+IFV
Sbjct: 91 KLIRKEKSSYGFVDYYERGSAALAILTLNGKQIFGQPIRVNWAYASGQREDTTDHFHIFV 150
Query: 147 GDLSPEVTDATLFACFSVY-PSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTG 205
GDLSPEVTD+ LFA FS Y P+CSDARVMWDQKTGRSRG+GFVSFRNQQDAQSAINDL G
Sbjct: 151 GDLSPEVTDSALFAFFSAYSPNCSDARVMWDQKTGRSRGYGFVSFRNQQDAQSAINDLNG 210
Query: 206 KWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTV 265
+WLG+RQIRCNWATKGA + ED+ +SD+KS+V++ N +E+ K+ +N +APENNP Y TV
Sbjct: 211 QWLGNRQIRCNWATKGANSGEDQLASDSKSIVDVNNNFTENAKQKSNEDAPENNPLYRTV 270
Query: 266 YVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQS 325
YVGNLA EVTQ LHR FH+LGAG IEEVRVQ KGFGFV+YS HAE ALAIQ GN
Sbjct: 271 YVGNLAHEVTQDVLHRFFHALGAGAIEEVRVQHGKGFGFVKYSNHAETALAIQTGN---G 327
Query: 326 SYLFGKQMKCSWGSKPTPPGTSSNPLPPPAAAPIPGLSAADLLAYERQIAMSKMGGVHAL 385
L GK +KCSWG+KPTPPGT+S PLPPPAA +AA+L+AY+R IAMSKM AL
Sbjct: 328 RILGGKPVKCSWGNKPTPPGTTSAPLPPPAAPSH--PAAANLVAYQRAIAMSKMASTQAL 385
Query: 386 MHPQAQHPLKQAAMGVGSAGASQAIYDG 413
M QAQH L+QAAMG+G GASQA+YDG
Sbjct: 386 M--QAQH-LRQAAMGMG-VGASQAMYDG 409
>gi|108864589|gb|ABG22554.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
Length = 403
Score = 532 bits (1371), Expect = e-149, Method: Compositional matrix adjust.
Identities = 277/376 (73%), Positives = 307/376 (81%), Gaps = 6/376 (1%)
Query: 39 IEPIPSGNLPPGFDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSSYGF 98
IEPI SGNLPPGFD STCRSVYVGNIH QVT+ LL EVF S GPVEGCKLIRK+KSS+GF
Sbjct: 23 IEPIVSGNLPPGFDSSTCRSVYVGNIHLQVTDSLLHEVFQSIGPVEGCKLIRKEKSSFGF 82
Query: 99 IHYFDRRSAAMAILSLNGRHLFGQPIKVNWAYASGQREDTSGHFNIFVGDLSPEVTDATL 158
+ Y+DRRSAA+AI+SLNGR LFGQPIKVNWAYAS QREDTSGHFNIFVGDL PEVTDA L
Sbjct: 83 VDYYDRRSAAIAIVSLNGRQLFGQPIKVNWAYASTQREDTSGHFNIFVGDLCPEVTDAAL 142
Query: 159 FACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWA 218
FA F+ + SCSDARVMWDQKTGRSRGFGFVSFRNQQDAQ+AIN+L GKWLG+RQ+RCNWA
Sbjct: 143 FAFFAGFTSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQNAINELNGKWLGNRQVRCNWA 202
Query: 219 TKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLD 278
TKGA E+KQ++D+K ++ELTNGSSE GK+ N + PENNPQYTTVYVGNL +V D
Sbjct: 203 TKGANAGEEKQNTDSKGMIELTNGSSEGGKDNANEDGPENNPQYTTVYVGNLPHDVNSND 262
Query: 279 LHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWG 338
+HR FHSLG G IEEVRV RDKGFGFVRYSTH EAALAIQ GN + G+Q+KCSWG
Sbjct: 263 VHRFFHSLGVGSIEEVRVTRDKGFGFVRYSTHEEAALAIQTGN---GQLIGGRQIKCSWG 319
Query: 339 SKPTPPGT-SSNPLPPPAAAPIPGLSAADLLAYERQIAMSKMGGVHALMHPQAQHPLKQA 397
SKPTPPGT S+ PP A PG+SA DLLAYER +A+SKM ALM A LKQA
Sbjct: 320 SKPTPPGTASAPLPPPAPAPFNPGMSATDLLAYERTLALSKMAANPALMSQHA--ALKQA 377
Query: 398 AMGVGSAGASQAIYDG 413
A AGASQAIYDG
Sbjct: 378 AAMGMGAGASQAIYDG 393
>gi|357121988|ref|XP_003562698.1| PREDICTED: nucleolysin TIAR-like [Brachypodium distachyon]
Length = 427
Score = 530 bits (1365), Expect = e-148, Method: Compositional matrix adjust.
Identities = 280/386 (72%), Positives = 317/386 (82%), Gaps = 15/386 (3%)
Query: 33 LLAAP---QIEPIPSGNLPPGFDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLI 89
LL AP QIEPI +GNLPPGFD STCRSVYVGNIH VTE +L+EVF STG VEGCKLI
Sbjct: 35 LLGAPPPQQIEPILTGNLPPGFDASTCRSVYVGNIHVHVTEAVLREVFQSTGSVEGCKLI 94
Query: 90 RKDKSSYGFIHYFDRRSAAMAILSLNGRHLFGQPIKVNWAYASGQREDTSGHFNIFVGDL 149
RK+KSSYGF+ Y++R SAA+AIL LNGR +FGQPI+VNWAYASGQREDT+ HFNIFVGDL
Sbjct: 95 RKEKSSYGFVDYYERGSAALAILQLNGRQIFGQPIRVNWAYASGQREDTTDHFNIFVGDL 154
Query: 150 SPEVTDATLFACFSVYPS-CSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWL 208
S EVTD+ LFA FS Y S CSDARVMWDQKTGRSRG+GFVSFRNQQDAQSAINDL G+WL
Sbjct: 155 SAEVTDSALFAFFSGYSSSCSDARVMWDQKTGRSRGYGFVSFRNQQDAQSAINDLNGQWL 214
Query: 209 GSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVG 268
G+RQIRCNWATKGA + ED+Q+SD+KS+ +TN +EDGKE N +APENNP Y TVYVG
Sbjct: 215 GNRQIRCNWATKGANSVEDQQTSDSKSIAGVTNNFTEDGKEKANEDAPENNPLYRTVYVG 274
Query: 269 NLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYL 328
NLA E TQ LHR F++LGAG IEEVRVQ KGFGFV+YS+HAEAALAIQMGN L
Sbjct: 275 NLAHEATQDVLHRFFYALGAGAIEEVRVQHGKGFGFVKYSSHAEAALAIQMGN---GCIL 331
Query: 329 FGKQMKCSWGSKPTPPGTSSNP-LPPPAAAPIPGLSAADLLAYERQIAMSKMGGVHALMH 387
GK +KCSWG+KPTPPGT+S P LPPP+A P AADLLAY+R IA++KM ALM
Sbjct: 332 GGKPIKCSWGNKPTPPGTTSTPLLPPPSAHLFP---AADLLAYQRAIALNKMTSTQALM- 387
Query: 388 PQAQHPLKQAAMGVG-SAGASQAIYD 412
QAQH LKQAAMG+G S A+QA+YD
Sbjct: 388 -QAQH-LKQAAMGMGMSPSANQAMYD 411
>gi|357148481|ref|XP_003574781.1| PREDICTED: nucleolysin TIAR-like [Brachypodium distachyon]
Length = 452
Score = 518 bits (1334), Expect = e-144, Method: Compositional matrix adjust.
Identities = 257/390 (65%), Positives = 307/390 (78%), Gaps = 21/390 (5%)
Query: 38 QIEPIPSGNLPPGFDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSSYG 97
Q+EP+ +GNLPPGFDPSTCRSVYVGN+H VTE LL EVF S+GPVE CKLIRK+KSS+G
Sbjct: 58 QMEPVSNGNLPPGFDPSTCRSVYVGNVHPNVTESLLIEVFQSSGPVERCKLIRKEKSSFG 117
Query: 98 FIHYFDRRSAAMAILSLNGRHLFGQPIKVNWAYASGQREDTSGHFNIFVGDLSPEVTDAT 157
F+ Y+DRRSAA+AI+SL+GRH++GQ IKVNWAYAS QREDTSGHF+IFVGDLS EV DAT
Sbjct: 118 FVDYYDRRSAALAIMSLHGRHIYGQAIKVNWAYASTQREDTSGHFHIFVGDLSSEVNDAT 177
Query: 158 LFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNW 217
L+ACFSVY SCSDARVMWD KTGRSRG+GFVSFRNQQ+A++AI ++TGKWLGSRQIRCNW
Sbjct: 178 LYACFSVYTSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQIRCNW 237
Query: 218 ATKGAGNNEDKQSSDAKSVVELTNGSS-----EDGKETTNTEAPENNPQYTTVYVGNLAP 272
ATK N E+KQ +D + V LTNGSS E +ET + E PENNP +TTVYVGNL
Sbjct: 238 ATK--TNAEEKQETDNHNAVVLTNGSSSNAAMEGNQETGSKENPENNPDFTTVYVGNLGH 295
Query: 273 EVTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQ 332
EV + +LHRHF++LG G IEEVRVQ+DKGFGFVRY+TH EAALAIQM N + GK
Sbjct: 296 EVNRDELHRHFYNLGVGAIEEVRVQQDKGFGFVRYNTHGEAALAIQMANGL---VIRGKP 352
Query: 333 MKCSWGSKPTPPGTSSNPLPPP-------AAAPIP-GLSAADLLAYERQIAMSKMGGVHA 384
+KCSWG+KPTPPGTSS PLPPP A A +P G +AA+LLAY+RQ+A+S+
Sbjct: 353 IKCSWGNKPTPPGTSSKPLPPPGPAYQPVAMAGVPQGFTAAELLAYQRQLALSQA--AAG 410
Query: 385 LMHPQAQHPLKQAAMGVGSAGASQAIYDGF 414
+ Q + G+ +AG SQA+YDG+
Sbjct: 411 QIAAGGHGLAGQVSAGLLAAG-SQALYDGY 439
>gi|326534302|dbj|BAJ89501.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 447
Score = 516 bits (1329), Expect = e-144, Method: Compositional matrix adjust.
Identities = 254/391 (64%), Positives = 307/391 (78%), Gaps = 24/391 (6%)
Query: 38 QIEPIPSGNLPPGFDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSSYG 97
Q+EP+ +GNLPPGFDPSTCRSVYVGN+H VTE LL EVF +GPVE CKLIRK+KSS+G
Sbjct: 54 QMEPVSNGNLPPGFDPSTCRSVYVGNVHPNVTENLLIEVFQGSGPVERCKLIRKEKSSFG 113
Query: 98 FIHYFDRRSAAMAILSLNGRHLFGQPIKVNWAYASGQREDTSGHFNIFVGDLSPEVTDAT 157
F+ Y+DRRSAA+AI++L+GRH++GQ IKVNWA+AS QREDTSGHF+IFVGDLS EV DAT
Sbjct: 114 FVDYYDRRSAALAIMTLHGRHIYGQAIKVNWAFASTQREDTSGHFHIFVGDLSSEVNDAT 173
Query: 158 LFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNW 217
L+ACFS YPSCSDARVMWD KTGRSRG+GFVSFRNQQ+A++AI ++TGKWLGSRQIRCNW
Sbjct: 174 LYACFSTYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQIRCNW 233
Query: 218 ATKGAGNNEDKQSSDAKSVVELTNGSS-----EDGKETTNTEAPENNPQYTTVYVGNLAP 272
ATK N E+KQ +D + V LTNG S E ++T + E PENNP +TTVYVGNL
Sbjct: 234 ATK--TNAEEKQETDNHNAVVLTNGGSSNAAMEANQDTGSKENPENNPDFTTVYVGNLGH 291
Query: 273 EVTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQ 332
EV + +LHRHF++LG G IEEVRVQ++KGFGF+RYSTH EAALAIQM N + GK
Sbjct: 292 EVNRDELHRHFYNLGVGAIEEVRVQQEKGFGFIRYSTHGEAALAIQMANGL---VVRGKP 348
Query: 333 MKCSWGSKPTPPGTSSNPLPPPAAAPIP--------GLSAADLLAYERQIAMSKMGGVHA 384
+KCSWG+KPTPPGTSS PLPPP A+ P G +AA+LLAY+RQ+A+S+ A
Sbjct: 349 IKCSWGNKPTPPGTSSKPLPPPIASYQPVAMAGVPQGFTAAELLAYQRQLALSQA----A 404
Query: 385 LMHPQAQHPLK-QAAMGVGSAGASQAIYDGF 414
QH L Q + G+ +AG SQA+YDG+
Sbjct: 405 AGQIAGQHGLAGQVSAGLLAAG-SQALYDGY 434
>gi|226500040|ref|NP_001150056.1| LOC100283683 [Zea mays]
gi|195636346|gb|ACG37641.1| nucleolysin TIAR [Zea mays]
Length = 421
Score = 514 bits (1324), Expect = e-143, Method: Compositional matrix adjust.
Identities = 251/317 (79%), Positives = 269/317 (84%), Gaps = 5/317 (1%)
Query: 30 HPGLLAAPQIEPIPSGNLPPGFDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLI 89
HPGLLAAPQIEPI SGNLPPGFD STCRSVYVGNIH QVT+ +LQEVF S GPVEGCKLI
Sbjct: 48 HPGLLAAPQIEPIVSGNLPPGFDSSTCRSVYVGNIHLQVTDTVLQEVFQSIGPVEGCKLI 107
Query: 90 RKDKSSYGFIHYFDRRSAAMAILSLNGRHLFGQPIKVNWAYASGQREDTSGHFNIFVGDL 149
RK+KSS+GFI Y+DRR AA+AILSLNGR L+GQPIKVNWAY S REDTSGHFNIFVGDL
Sbjct: 108 RKEKSSFGFIDYYDRRYAALAILSLNGRQLYGQPIKVNWAYTSTPREDTSGHFNIFVGDL 167
Query: 150 SPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLG 209
PEVTDATLFA FS Y +CSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDL GKWLG
Sbjct: 168 CPEVTDATLFAFFSGYSTCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLNGKWLG 227
Query: 210 SRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGN 269
+RQIRCNWATKGA E+KQ D K V+L+NGSSE GKE N + PENNPQ+TTVYVGN
Sbjct: 228 NRQIRCNWATKGANAGEEKQILDTK--VDLSNGSSESGKENPNDDGPENNPQFTTVYVGN 285
Query: 270 LAPEVTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLF 329
L E T D+H FHSLGAG IEEVRV RDKGFGFVRYSTH EAALAIQMGN +
Sbjct: 286 LPHEATMNDVHLFFHSLGAGSIEEVRVTRDKGFGFVRYSTHEEAALAIQMGN---GQLIG 342
Query: 330 GKQMKCSWGSKPTPPGT 346
G+Q+KCSWGSKPTP GT
Sbjct: 343 GRQIKCSWGSKPTPQGT 359
>gi|242082185|ref|XP_002445861.1| hypothetical protein SORBIDRAFT_07g027050 [Sorghum bicolor]
gi|241942211|gb|EES15356.1| hypothetical protein SORBIDRAFT_07g027050 [Sorghum bicolor]
Length = 447
Score = 513 bits (1322), Expect = e-143, Method: Compositional matrix adjust.
Identities = 255/392 (65%), Positives = 304/392 (77%), Gaps = 24/392 (6%)
Query: 38 QIEPIPSGNLPPGFDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSSYG 97
Q+EPI +GNLPPGFDPSTCRSVYVGN++ VTE LL EVF S G VE CKLIRK+KSS+G
Sbjct: 52 QMEPISNGNLPPGFDPSTCRSVYVGNVNPNVTESLLIEVFQSAGLVERCKLIRKEKSSFG 111
Query: 98 FIHYFDRRSAAMAILSLNGRHLFGQPIKVNWAYASGQREDTSGHFNIFVGDLSPEVTDAT 157
F+ Y+DRRSAA+AI++L+GRH++GQ IKVNWAYAS QREDTSGHF+IFVGDLS EV DAT
Sbjct: 112 FVDYYDRRSAALAIMTLHGRHIYGQAIKVNWAYASTQREDTSGHFHIFVGDLSSEVNDAT 171
Query: 158 LFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNW 217
L+ACFS YPSCSDARVMWD KTGRSRG+GFVSFRNQQ+A++AI ++TGKWLGSRQIRCNW
Sbjct: 172 LYACFSAYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQIRCNW 231
Query: 218 ATKGAGNNEDKQSSDAKSVVELTNGSSED-----GKETTNTEAPENNPQYTTVYVGNLAP 272
ATK N+E+K +D + V LTNGSS + ++ + E PENNP TTVYVGNL
Sbjct: 232 ATK--NNSEEKPETDNHNAVVLTNGSSSNSATDASQDGGSKENPENNPDCTTVYVGNLGH 289
Query: 273 EVTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQ 332
EV + +LHRHF+SLG G IEE+RVQ+DKGFGFVRYSTH EAALAIQMGN + GK
Sbjct: 290 EVNRDELHRHFYSLGVGAIEEIRVQQDKGFGFVRYSTHGEAALAIQMGNGL---VVRGKP 346
Query: 333 MKCSWGSKPTPPGTSSNPLPPPAAAPIP---------GLSAADLLAYERQIAMSKMGGVH 383
+KCSWG+KPTPPGTSS PLPPP A P G +AA+LLAY+RQ+A+S+
Sbjct: 347 IKCSWGNKPTPPGTSSKPLPPPVAPYQPAVAMPGVPQGFTAAELLAYQRQLALSQA---- 402
Query: 384 ALMHPQAQHPLK-QAAMGVGSAGASQAIYDGF 414
A QH L Q + G+ +A SQA+YDG+
Sbjct: 403 AAGQIAGQHGLAGQVSAGLLAAAGSQALYDGY 434
>gi|226505614|ref|NP_001148740.1| LOC100282356 [Zea mays]
gi|195621754|gb|ACG32707.1| mRNA 3-UTR binding protein [Zea mays]
gi|224030425|gb|ACN34288.1| unknown [Zea mays]
gi|413921566|gb|AFW61498.1| mRNA 3-UTR binding protein [Zea mays]
Length = 449
Score = 513 bits (1320), Expect = e-143, Method: Compositional matrix adjust.
Identities = 252/392 (64%), Positives = 304/392 (77%), Gaps = 24/392 (6%)
Query: 38 QIEPIPSGNLPPGFDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSSYG 97
Q+EPI +GNLPPGFDPSTCRSVYVGN++ VTE LL EVF S G VE CKLIRK+KSS+G
Sbjct: 54 QMEPISNGNLPPGFDPSTCRSVYVGNVNPNVTESLLIEVFQSAGLVERCKLIRKEKSSFG 113
Query: 98 FIHYFDRRSAAMAILSLNGRHLFGQPIKVNWAYASGQREDTSGHFNIFVGDLSPEVTDAT 157
F+ Y+DRRSAA+AI++L+GRH++GQ IKVNWAYAS QREDTSGHF+IFVGDLS EV DAT
Sbjct: 114 FVDYYDRRSAALAIMTLHGRHIYGQAIKVNWAYASTQREDTSGHFHIFVGDLSSEVNDAT 173
Query: 158 LFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNW 217
L+ACFS YPSCSDARVMWD KTGRSRG+GFVSFRNQQ+A++AI ++TGKWLGSRQIRCNW
Sbjct: 174 LYACFSAYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQIRCNW 233
Query: 218 ATKGAGNNEDKQSSDAKSVVELTNGSSED-----GKETTNTEAPENNPQYTTVYVGNLAP 272
ATK N+E+K +D + V LTNGSS + ++ + E PENNP TTVYVGNL
Sbjct: 234 ATK--TNSEEKPETDNHNAVVLTNGSSTNSATDASQDAGSKENPENNPDCTTVYVGNLGH 291
Query: 273 EVTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQ 332
EV + +LHRHF++LG G IEE+RVQ+DKGFGFVRYSTH EAALAIQM N + GK
Sbjct: 292 EVNRDELHRHFYNLGVGAIEEIRVQQDKGFGFVRYSTHGEAALAIQMANGL---VVRGKS 348
Query: 333 MKCSWGSKPTPPGTSSNPLPPPAAAPIP---------GLSAADLLAYERQIAMSKMGGVH 383
+KCSWG+KPTPPGT+S PLPPP A+ P G +AA+LLAY+RQ+A+S+
Sbjct: 349 IKCSWGNKPTPPGTTSKPLPPPVASYQPAVAMSGVPQGFTAAELLAYQRQLALSQA---- 404
Query: 384 ALMHPQAQHPLK-QAAMGVGSAGASQAIYDGF 414
A QH L Q + G+ +A SQA+YDG+
Sbjct: 405 AAGQIAGQHGLAGQVSAGLLAAAGSQALYDGY 436
>gi|194701250|gb|ACF84709.1| unknown [Zea mays]
Length = 424
Score = 513 bits (1320), Expect = e-143, Method: Compositional matrix adjust.
Identities = 252/392 (64%), Positives = 304/392 (77%), Gaps = 24/392 (6%)
Query: 38 QIEPIPSGNLPPGFDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSSYG 97
Q+EPI +GNLPPGFDPSTCRSVYVGN++ VTE LL EVF S G VE CKLIRK+KSS+G
Sbjct: 29 QMEPISNGNLPPGFDPSTCRSVYVGNVNPNVTESLLIEVFQSAGLVERCKLIRKEKSSFG 88
Query: 98 FIHYFDRRSAAMAILSLNGRHLFGQPIKVNWAYASGQREDTSGHFNIFVGDLSPEVTDAT 157
F+ Y+DRRSAA+AI++L+GRH++GQ IKVNWAYAS QREDTSGHF+IFVGDLS EV DAT
Sbjct: 89 FVDYYDRRSAALAIMTLHGRHIYGQAIKVNWAYASTQREDTSGHFHIFVGDLSSEVNDAT 148
Query: 158 LFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNW 217
L+ACFS YPSCSDARVMWD KTGRSRG+GFVSFRNQQ+A++AI ++TGKWLGSRQIRCNW
Sbjct: 149 LYACFSAYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQIRCNW 208
Query: 218 ATKGAGNNEDKQSSDAKSVVELTNGSSED-----GKETTNTEAPENNPQYTTVYVGNLAP 272
ATK N+E+K +D + V LTNGSS + ++ + E PENNP TTVYVGNL
Sbjct: 209 ATK--TNSEEKPETDNHNAVVLTNGSSTNSATDASQDAGSKENPENNPDCTTVYVGNLGH 266
Query: 273 EVTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQ 332
EV + +LHRHF++LG G IEE+RVQ+DKGFGFVRYSTH EAALAIQM N + GK
Sbjct: 267 EVNRDELHRHFYNLGVGAIEEIRVQQDKGFGFVRYSTHGEAALAIQMANGL---VVRGKS 323
Query: 333 MKCSWGSKPTPPGTSSNPLPPPAAAPIP---------GLSAADLLAYERQIAMSKMGGVH 383
+KCSWG+KPTPPGT+S PLPPP A+ P G +AA+LLAY+RQ+A+S+
Sbjct: 324 IKCSWGNKPTPPGTTSKPLPPPVASYQPAVAMSGVPQGFTAAELLAYQRQLALSQA---- 379
Query: 384 ALMHPQAQHPLK-QAAMGVGSAGASQAIYDGF 414
A QH L Q + G+ +A SQA+YDG+
Sbjct: 380 AAGQIAGQHGLAGQVSAGLLAAAGSQALYDGY 411
>gi|168027692|ref|XP_001766363.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162682272|gb|EDQ68691.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 397
Score = 508 bits (1307), Expect = e-141, Method: Compositional matrix adjust.
Identities = 253/394 (64%), Positives = 302/394 (76%), Gaps = 14/394 (3%)
Query: 4 QRLKQQQQQQQQALMQQALLQQQSLYHPGLLAA-PQIEPIPSGNLPPGFDPSTCRSVYVG 62
QRLK Q Q Q QQQ+LYHPGLLA PQ+EP+PSGNLPPGFD ++CRSVYVG
Sbjct: 2 QRLKHQSLVQVMLQQNQHQPQQQALYHPGLLATIPQMEPLPSGNLPPGFDATSCRSVYVG 61
Query: 63 NIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSSYGFIHYFDRRSAAMAILSLNGRHLFGQ 122
NIHT+VTE LL EVFS+ GP+EGCKLIRK+KSSYGF+ Y D AA+A+ +LNGR +FGQ
Sbjct: 62 NIHTKVTEALLAEVFSNIGPLEGCKLIRKEKSSYGFVDYLDHIYAAVALTTLNGRLIFGQ 121
Query: 123 PIKVNWAYASGQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRS 182
PIKVNWAYASGQREDT+GH+N+FVGDLSPEVTDATLFA F VYPSCSDARVMWDQ++GRS
Sbjct: 122 PIKVNWAYASGQREDTTGHYNVFVGDLSPEVTDATLFAAFCVYPSCSDARVMWDQRSGRS 181
Query: 183 RGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNG 242
RGFGFVSFR+QQ+A++AI+++TGKWLG+R IRCNWATK + ++++ V + +
Sbjct: 182 RGFGFVSFRSQQEAENAISEMTGKWLGTRSIRCNWATKTNSSASADETNNGGHAVGMNDS 241
Query: 243 SSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDKGF 302
SED E + + PENNPQYTTVYVGNLA EV Q +LHR FH +GAGVIE+VRVQ+DKGF
Sbjct: 242 KSEDRPEGSAGDGPENNPQYTTVYVGNLAHEVNQGELHRWFHCMGAGVIEDVRVQKDKGF 301
Query: 303 GFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSKPTPPGTSS---------NPLPP 353
GFVRY TH EAALAIQ N L GK +KCSWGSKPT PG+SS NP
Sbjct: 302 GFVRYRTHEEAALAIQAAN---GRVLCGKSVKCSWGSKPTVPGSSSAPLPPPLPVNPYQA 358
Query: 354 PAAAPIP-GLSAADLLAYERQIAMSKMGGVHALM 386
+ + G SAADLLAY+RQ++M+ G AL+
Sbjct: 359 GLMSGVNLGYSAADLLAYQRQLSMTPQGAGRALL 392
>gi|148909819|gb|ABR17996.1| unknown [Picea sitchensis]
Length = 490
Score = 504 bits (1299), Expect = e-140, Method: Compositional matrix adjust.
Identities = 262/423 (61%), Positives = 303/423 (71%), Gaps = 41/423 (9%)
Query: 27 SLYHPGLLA-APQIEPIPSGNLPPGFDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEG 85
SLYH GLLA QIEPIPSGNLPPGFD S CRSVYVGNI VTE LL EVF + GP+EG
Sbjct: 48 SLYHAGLLAPLSQIEPIPSGNLPPGFDSSACRSVYVGNISVHVTEGLLAEVFGAVGPLEG 107
Query: 86 CKLIRKDKSSYGFIHYFDRRSAAMAILSLNGRHLFGQPIKVNWAYASGQREDTSGHFNIF 145
CKLI+K+KSSYGF+ Y+D RSAA +IL LNG+ ++GQ IKVNWAYASGQREDT+GH++IF
Sbjct: 108 CKLIKKEKSSYGFVDYYDHRSAANSILHLNGKQIYGQAIKVNWAYASGQREDTTGHYSIF 167
Query: 146 VGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTG 205
VGDLSPEVTDA LFACFS+YPSCSDARVMWDQK+GRSRGFGFVSFRNQQDA +AIN +TG
Sbjct: 168 VGDLSPEVTDAALFACFSIYPSCSDARVMWDQKSGRSRGFGFVSFRNQQDADNAINQMTG 227
Query: 206 KWLGSRQIRCNWATKGAGNN--EDKQSSDAKSVVELTNGSSEDGKETTN----------- 252
K LGSR IRCNWATK + N +DKQ+S+ + +N +S +G N
Sbjct: 228 KTLGSRPIRCNWATKSSSGNQSDDKQTSEMQFASNASNNTSANGSADHNISAGTTAVGTG 287
Query: 253 --------TEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDKGFGF 304
T PENNP YTTVY+GNL EVTQ +LHR F +LG GVIE+VRVQRDKGFGF
Sbjct: 288 GQQKGGAQTSGPENNPSYTTVYIGNLPHEVTQTELHRQFLALGVGVIEDVRVQRDKGFGF 347
Query: 305 VRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSKPTPPGTSSNPLPPPAA------AP 358
VRY +H EAALAIQ+ N + GK +KCSWGSKPTPPG SSN LPPP+A AP
Sbjct: 348 VRYRSHEEAALAIQLAN---GRVICGKSIKCSWGSKPTPPGASSNALPPPSAPFQGVVAP 404
Query: 359 ---IPGLSAADLLAYERQIAMSKMGGVHALMHPQAQH----PLKQAAMGVGSAGASQAIY 411
G +AAD+LAY RQ+ MS+ G L+ AQ L MGV G +Q +Y
Sbjct: 405 QGLNQGYTAADILAY-RQLNMSQAGAGQPLLPLSAQQGMGLGLGHGPMGV--VGPNQNVY 461
Query: 412 DGF 414
D F
Sbjct: 462 DNF 464
>gi|115477340|ref|NP_001062266.1| Os08g0520300 [Oryza sativa Japonica Group]
gi|42408523|dbj|BAD09702.1| putative oligouridylate binding protein [Oryza sativa Japonica
Group]
gi|42409171|dbj|BAD10437.1| putative oligouridylate binding protein [Oryza sativa Japonica
Group]
gi|113624235|dbj|BAF24180.1| Os08g0520300 [Oryza sativa Japonica Group]
gi|215697677|dbj|BAG91671.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222640879|gb|EEE69011.1| hypothetical protein OsJ_27962 [Oryza sativa Japonica Group]
Length = 447
Score = 503 bits (1295), Expect = e-140, Method: Compositional matrix adjust.
Identities = 255/391 (65%), Positives = 302/391 (77%), Gaps = 24/391 (6%)
Query: 38 QIEPIPSGNLPPGFDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSSYG 97
Q+EPI +GNLPPGFDPSTCRSVYVGN+H VTE LL EVF S+G VE CKLIRK+KSS+G
Sbjct: 54 QMEPISNGNLPPGFDPSTCRSVYVGNVHPNVTESLLIEVFQSSGLVERCKLIRKEKSSFG 113
Query: 98 FIHYFDRRSAAMAILSLNGRHLFGQPIKVNWAYASGQREDTSGHFNIFVGDLSPEVTDAT 157
F+ Y+DRRSAA+AI++L+GRH+ GQ IKVNWAYAS QREDTSGHF+IFVGDLS EV DAT
Sbjct: 114 FVDYYDRRSAALAIMTLHGRHICGQAIKVNWAYASTQREDTSGHFHIFVGDLSSEVNDAT 173
Query: 158 LFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNW 217
L+ACFS YPSCSDARVMWD KTGRSRG+GFVSFRNQQ+A++AI ++TGKWLGSRQIRCNW
Sbjct: 174 LYACFSAYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQIRCNW 233
Query: 218 ATKGAGNNEDKQSSDAKSVVELTNGSS-----EDGKETTNTEAPENNPQYTTVYVGNLAP 272
ATK N E+KQ +D + V LTNGSS E ++T + E PENNP TTVYVGNL
Sbjct: 234 ATK--NNAEEKQETDNHNAVVLTNGSSSNPGMEASQDTGSKENPENNPDCTTVYVGNLGH 291
Query: 273 EVTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQ 332
EV + +LHRHF++LG G IEEVRVQ+DKGFGFVRYS H EAALAIQM N + GK
Sbjct: 292 EVNRDELHRHFYNLGVGAIEEVRVQQDKGFGFVRYSNHGEAALAIQMANGL---VVRGKP 348
Query: 333 MKCSWGSKPTPPGTSSNPL--------PPPAAAPIPGLSAADLLAYERQIAMSKMGGVHA 384
+KCSWG+KPTPPGTSS PL P P A G SAAD++AY+RQ+ +S++ A
Sbjct: 349 IKCSWGNKPTPPGTSSKPLPPPLPSYQPVPMAGVPQGFSAADIVAYQRQLTLSQV----A 404
Query: 385 LMHPQAQHPLK-QAAMGVGSAGASQAIYDGF 414
QH L Q + G+ +AG SQA+YDG+
Sbjct: 405 AGQIAGQHGLAGQVSAGLLAAG-SQALYDGY 434
>gi|226528727|ref|NP_001148487.1| mRNA 3-UTR binding protein [Zea mays]
gi|195619730|gb|ACG31695.1| mRNA 3-UTR binding protein [Zea mays]
Length = 447
Score = 498 bits (1283), Expect = e-138, Method: Compositional matrix adjust.
Identities = 251/393 (63%), Positives = 299/393 (76%), Gaps = 27/393 (6%)
Query: 38 QIEPIPSGNLPPGFDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSSYG 97
Q+EP+ +GNLPPGFDPSTCRSVYVGN++ VTE LL EVF S G VE CKLIRK+KSS+G
Sbjct: 53 QMEPVSNGNLPPGFDPSTCRSVYVGNVNPNVTESLLIEVFQSAGLVERCKLIRKEKSSFG 112
Query: 98 FIHYFDRRSAAMAILSLNGRHLFGQPIKVNWAYASGQREDTSGHFNIFVGDLSPEVTDAT 157
F+ Y+DRRSAA+AI++L+GRH++GQ IKVNWAYAS QREDTSGHF+IFVGDLS EV DAT
Sbjct: 113 FVDYYDRRSAALAIMTLHGRHVYGQAIKVNWAYASTQREDTSGHFHIFVGDLSSEVNDAT 172
Query: 158 LFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNW 217
L+ACFS YPSCSDARVMWD KTGRSRG+GFVSFRNQQ+A++AI ++TGKWLGSRQIRCNW
Sbjct: 173 LYACFSAYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAIAEMTGKWLGSRQIRCNW 232
Query: 218 ATKGAGNNEDKQSSDAKSVVELTNGSSED-----GKETTNTEAPENNPQYTTVYVGNLAP 272
ATK N+E+K +D + V LTNGSS + ++ + E P+NNP TTVYVGNL
Sbjct: 233 ATK--NNSEEKPETDNHNAVVLTNGSSNNSATDASQDAGSKEPPQNNPDCTTVYVGNLGH 290
Query: 273 EVTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQ 332
EV + +LHRHF++LG G IEEVRVQ+DKGFGFVRYSTH EAALAIQM N S + GK
Sbjct: 291 EVNRDELHRHFYNLGVGAIEEVRVQQDKGFGFVRYSTHGEAALAIQMSN---GSVVRGKP 347
Query: 333 MKCSWGSKPTPPGTSSNPLPPPAAAPIP---------GLSAADLLAYERQIAMSK--MGG 381
+KCSWG KPTPPGT S PLPPPAA P G + A+LLAY+RQ+A+S+ G
Sbjct: 348 IKCSWGVKPTPPGTGSKPLPPPAATYQPAVAMQGVPQGFTTAELLAYQRQLALSQAAAGQ 407
Query: 382 VHALMHPQAQHPLKQAAMGVGSAGASQAIYDGF 414
HA + Q AA SQA+YDG+
Sbjct: 408 QHAGLAGQVSAAGLLAAA------GSQALYDGY 434
>gi|223948725|gb|ACN28446.1| unknown [Zea mays]
gi|414869520|tpg|DAA48077.1| TPA: mRNA 3-UTR binding protein [Zea mays]
Length = 446
Score = 494 bits (1273), Expect = e-137, Method: Compositional matrix adjust.
Identities = 255/407 (62%), Positives = 304/407 (74%), Gaps = 33/407 (8%)
Query: 30 HPGLLAA------PQIEPIPSGNLPPGFDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPV 83
G+LAA Q+EP+ +GNLPPGFDPSTCRSVYVGN++ VTE LL EVF S G V
Sbjct: 38 QSGVLAAAAAAAMTQMEPVSNGNLPPGFDPSTCRSVYVGNVNPNVTESLLIEVFQSAGLV 97
Query: 84 EGCKLIRKDKSSYGFIHYFDRRSAAMAILSLNGRHLFGQPIKVNWAYASGQREDTSGHFN 143
E CKLIRK+KSS+GF+ Y+DRRSAA+AI++L+GRH++GQ IKVNWAYAS QREDTSGHF+
Sbjct: 98 ERCKLIRKEKSSFGFVDYYDRRSAALAIMTLHGRHVYGQAIKVNWAYASTQREDTSGHFH 157
Query: 144 IFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDL 203
IFVGDLS EV DATL+ACFS YPSCSDARVMWD KTGRSRG+GFVSFRNQQ+A++AI ++
Sbjct: 158 IFVGDLSSEVNDATLYACFSAYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEM 217
Query: 204 TGKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSED-----GKETTNTEAPEN 258
TGKWLGSRQIRCNWATK N+E+K +D + V LTNGSS + ++ + E P+N
Sbjct: 218 TGKWLGSRQIRCNWATK--NNSEEKPETDNHNAVVLTNGSSNNSATDASQDAGSKEPPQN 275
Query: 259 NPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQ 318
NP TTVYVGNL EV + +LHRHF++LG G IEEVRVQ+DKGFGFVRYSTH EAALAIQ
Sbjct: 276 NPDCTTVYVGNLGHEVNRDELHRHFYNLGVGAIEEVRVQQDKGFGFVRYSTHGEAALAIQ 335
Query: 319 MGNTTQSSYLFGKQMKCSWGSKPTPPGTSSNPLPPPAAAPIP---------GLSAADLLA 369
M N S + GK +KCSWG KPTPPGT S PLPPPAA P G + A+LLA
Sbjct: 336 MSN---GSVVRGKPIKCSWGVKPTPPGTGSKPLPPPAATYQPAVAMPGVPQGFTTAELLA 392
Query: 370 YERQIAMSK--MGGVHALMHPQAQHPLKQAAMGVGSAGASQAIYDGF 414
Y+RQ+A+S+ G HA + Q AA SQA+YDG+
Sbjct: 393 YQRQLALSQAAAGQQHAGLAGQVSAAGLLAAA------GSQALYDGY 433
>gi|22208507|gb|AAM94322.1| putative oligouridylate binding protein [Sorghum bicolor]
Length = 581
Score = 486 bits (1251), Expect = e-135, Method: Compositional matrix adjust.
Identities = 236/305 (77%), Positives = 257/305 (84%), Gaps = 5/305 (1%)
Query: 30 HPGLLAAPQIEPIPSGNLPPGFDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLI 89
HPGLLAAPQ+EPI SGNLPPGFD STCRSVYVGNI QVT+ +LQEVF S GPVEGCKLI
Sbjct: 40 HPGLLAAPQMEPIVSGNLPPGFDSSTCRSVYVGNISLQVTDTVLQEVFQSIGPVEGCKLI 99
Query: 90 RKDKSSYGFIHYFDRRSAAMAILSLNGRHLFGQPIKVNWAYASGQREDTSGHFNIFVGDL 149
RK+KSS+GFI Y+DRR AA+AILSLNGR L+GQPIKVNWAY S QREDTSGHFNIFVGDL
Sbjct: 100 RKEKSSFGFIDYYDRRYAALAILSLNGRPLYGQPIKVNWAYTSTQREDTSGHFNIFVGDL 159
Query: 150 SPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLG 209
PEVTDATLFA FS Y +CSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDL GKWLG
Sbjct: 160 CPEVTDATLFAFFSGYSTCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLNGKWLG 219
Query: 210 SRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGN 269
+RQIRCNWATKGA E+KQ D+K V+LTNG+SE GKE N + PE+NPQ+TTVYVGN
Sbjct: 220 NRQIRCNWATKGANAGEEKQIVDSK--VDLTNGTSESGKENPNEDGPESNPQFTTVYVGN 277
Query: 270 LAPEVTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLF 329
L E T D+H FHSLGAG IEEVRV RDKGFGFVRYSTH EAA AIQM N +
Sbjct: 278 LPHEATNNDVHLFFHSLGAGSIEEVRVTRDKGFGFVRYSTHEEAAQAIQMAN---GQLIG 334
Query: 330 GKQMK 334
G+Q+K
Sbjct: 335 GRQIK 339
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 93/213 (43%), Gaps = 43/213 (20%)
Query: 137 DTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDA 196
D+S +++VG++S +VTD L F +++ +K+ FGF+ + +++ A
Sbjct: 62 DSSTCRSVYVGNISLQVTDTVLQEVFQSIGPVEGCKLIRKEKSS----FGFIDYYDRRYA 117
Query: 197 QSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAP 256
AI L G+ L + I+ NWA T+T+
Sbjct: 118 ALAILSLNGRPLYGQPIKVNWAY-------------------------------TSTQR- 145
Query: 257 ENNPQYTTVYVGNLAPEVTQLDLHRHFHSLG----AGVIEEVRVQRDKGFGFVRYSTHAE 312
E+ + ++VG+L PEVT L F A V+ + + R +GFGFV + +
Sbjct: 146 EDTSGHFNIFVGDLCPEVTDATLFAFFSGYSTCSDARVMWDQKTGRSRGFGFVSFRNQQD 205
Query: 313 AALAIQMGNTTQSSYLFGKQMKCSWGSKPTPPG 345
A AI N +L +Q++C+W +K G
Sbjct: 206 AQSAI---NDLNGKWLGNRQIRCNWATKGANAG 235
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/80 (57%), Positives = 57/80 (71%), Gaps = 6/80 (7%)
Query: 335 CSWGSKPTPPGTSSNPLPPPAAAPI-PGLSAADLLAYERQIAMSKMGGVHALMHPQAQHP 393
CSWGSKPTPPGT+S+PLPPPA A G+S D LAY+R +A++KM +LM QH
Sbjct: 480 CSWGSKPTPPGTASSPLPPPAPALFSTGVSPTDFLAYQR-MALNKMATNPSLM---GQHA 535
Query: 394 LKQAAMGVGSAGASQAIYDG 413
L Q A+G+G ASQ+IYDG
Sbjct: 536 LNQVALGMGGR-ASQSIYDG 554
>gi|23928438|gb|AAN40024.1| putative oligouridylate binding protein [Zea mays]
Length = 639
Score = 479 bits (1232), Expect = e-132, Method: Compositional matrix adjust.
Identities = 233/301 (77%), Positives = 252/301 (83%), Gaps = 5/301 (1%)
Query: 36 APQIEPIPSGNLPPGFDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS 95
P+IEPI SGNLPPGFD STCRSVYVGNIH QVT+ +LQEVF S GPVEGCKLIRK+KSS
Sbjct: 98 CPKIEPIVSGNLPPGFDSSTCRSVYVGNIHLQVTDTVLQEVFQSIGPVEGCKLIRKEKSS 157
Query: 96 YGFIHYFDRRSAAMAILSLNGRHLFGQPIKVNWAYASGQREDTSGHFNIFVGDLSPEVTD 155
+GFI Y+DRR AA+AILSLNGR L+GQPIKVNWAY S REDTSGHFNIFVGDL PEVTD
Sbjct: 158 FGFIDYYDRRYAALAILSLNGRQLYGQPIKVNWAYTSTPREDTSGHFNIFVGDLCPEVTD 217
Query: 156 ATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRC 215
ATLFA FS Y +CSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDL GKWLG+RQIRC
Sbjct: 218 ATLFAFFSGYSTCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLNGKWLGNRQIRC 277
Query: 216 NWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVT 275
NWATKGA E+KQ D K V+L+NGSSE GKE N + PENNPQ+TTVYVGNL E T
Sbjct: 278 NWATKGANAGEEKQILDTK--VDLSNGSSESGKENPNDDGPENNPQFTTVYVGNLPHEAT 335
Query: 276 QLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKC 335
D+H FHSLGAG IEEVRV RDKGFGFVRYSTH EAALAIQMGN + G+Q+K
Sbjct: 336 MNDVHLFFHSLGAGSIEEVRVTRDKGFGFVRYSTHEEAALAIQMGN---GQLIGGRQIKS 392
Query: 336 S 336
S
Sbjct: 393 S 393
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 134/442 (30%), Positives = 192/442 (43%), Gaps = 98/442 (22%)
Query: 49 PGFDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS----YGFIHYFDR 104
P D S +++VG++ +VT+ L FS +++ K+ +GF+ + ++
Sbjct: 196 PREDTSGHFNIFVGDLCPEVTDATLFAFFSGYSTCSDARVMWDQKTGRSRGFGFVSFRNQ 255
Query: 105 RSAAMAILSLNGRHLFGQPIKVNWAYASG------QREDT----------SGHFN----- 143
+ A AI LNG+ L + I+ NWA Q DT SG N
Sbjct: 256 QDAQSAINDLNGKWLGNRQIRCNWATKGANAGEEKQILDTKVDLSNGSSESGKENPNDDG 315
Query: 144 ---------IFVGDLSPEVT--DATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRN 192
++VG+L E T D LF S + RV R +GFGFV +
Sbjct: 316 PENNPQFTTVYVGNLPHEATMNDVHLFFHSLGAGSIEEVRVT------RDKGFGFVRYST 369
Query: 193 QQDAQSAINDLTGKWLGSRQIR------------------CNWAT----------KGAGN 224
++A AI G+ +G RQI+ C W + GA
Sbjct: 370 HEEAALAIQMGNGQLIGGRQIKSSKHELQILPTLSATFRSCTWTSTHLNHRLRDYDGAYE 429
Query: 225 NEDKQSSD----AKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLH 280
+ SD + SV L G+ + +A T +YV + + L
Sbjct: 430 LRTAEESDRCEGSSSVEFLLEGNDAVRQGGDLYDAGTTCMPCTHIYVIPIKCFLQTLSAV 489
Query: 281 RHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSY-------LFGKQM 333
R LG ++++ + D+G R E + I+ G S + GK
Sbjct: 490 R---VLGF-IMKDESLLPDEG----RCCDTCE--VIIRQGEPCSSGVAESSEDKVVGKVA 539
Query: 334 KCSWGSKPTPPGTSSNPLPPPAAAPIP-GLSAADLLAYERQIAMSKMGGVHALMHPQAQH 392
+CSWGSKPTP GT+S PLPPPA AP G+SA DLLAY+R + +SKM ALM QH
Sbjct: 540 RCSWGSKPTPQGTASLPLPPPALAPFSTGVSATDLLAYQR-LTLSKMASNPALM---GQH 595
Query: 393 PLKQ-AAMGVGSAGASQAIYDG 413
LKQ AA+G+G GASQ+IYDG
Sbjct: 596 ALKQVAALGIG-GGASQSIYDG 616
>gi|413920411|gb|AFW60343.1| putative oligouridylate binding protein [Zea mays]
Length = 425
Score = 476 bits (1226), Expect = e-132, Method: Compositional matrix adjust.
Identities = 233/301 (77%), Positives = 252/301 (83%), Gaps = 5/301 (1%)
Query: 36 APQIEPIPSGNLPPGFDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS 95
P+IEPI SGNLPPGFD STCRSVYVGNIH QVT+ +LQEVF S GPVEGCKLIRK+KSS
Sbjct: 98 CPKIEPIVSGNLPPGFDSSTCRSVYVGNIHLQVTDTVLQEVFQSIGPVEGCKLIRKEKSS 157
Query: 96 YGFIHYFDRRSAAMAILSLNGRHLFGQPIKVNWAYASGQREDTSGHFNIFVGDLSPEVTD 155
+GFI Y+DRR AA+AILSLNGR L+GQPIKVNWAY S REDTSGHFNIFVGDL PEVTD
Sbjct: 158 FGFIDYYDRRYAALAILSLNGRQLYGQPIKVNWAYTSTPREDTSGHFNIFVGDLCPEVTD 217
Query: 156 ATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRC 215
ATLFA FS Y +CSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDL GKWLG+RQIRC
Sbjct: 218 ATLFAFFSGYSTCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLNGKWLGNRQIRC 277
Query: 216 NWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVT 275
NWATKGA E+KQ D K V+L+NGSSE GKE N + PENNPQ+TTVYVGNL E T
Sbjct: 278 NWATKGANAGEEKQILDTK--VDLSNGSSESGKENPNEDGPENNPQFTTVYVGNLPHEAT 335
Query: 276 QLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKC 335
D+H FHSLGAG IEEVRV RDKGFGFVRYSTH EAALAIQMGN + G+Q+K
Sbjct: 336 MNDVHLFFHSLGAGSIEEVRVTRDKGFGFVRYSTHEEAALAIQMGN---GQLIGGRQIKS 392
Query: 336 S 336
S
Sbjct: 393 S 393
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 89/209 (42%), Gaps = 45/209 (21%)
Query: 137 DTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDA 196
D+S +++VG++ +VTD L F +++ +K+ FGF+ + +++ A
Sbjct: 114 DSSTCRSVYVGNIHLQVTDTVLQEVFQSIGPVEGCKLIRKEKSS----FGFIDYYDRRYA 169
Query: 197 QSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAP 256
AI L G+ L + I+ NWA T P
Sbjct: 170 ALAILSLNGRQLYGQPIKVNWAY---------------------------------TSTP 196
Query: 257 -ENNPQYTTVYVGNLAPEVTQLDLHRHFHSLG----AGVIEEVRVQRDKGFGFVRYSTHA 311
E+ + ++VG+L PEVT L F A V+ + + R +GFGFV +
Sbjct: 197 REDTSGHFNIFVGDLCPEVTDATLFAFFSGYSTCSDARVMWDQKTGRSRGFGFVSFRNQQ 256
Query: 312 EAALAIQMGNTTQSSYLFGKQMKCSWGSK 340
+A AI N +L +Q++C+W +K
Sbjct: 257 DAQSAI---NDLNGKWLGNRQIRCNWATK 282
>gi|302772731|ref|XP_002969783.1| hypothetical protein SELMODRAFT_64568 [Selaginella moellendorffii]
gi|302806762|ref|XP_002985112.1| hypothetical protein SELMODRAFT_44478 [Selaginella moellendorffii]
gi|300146940|gb|EFJ13606.1| hypothetical protein SELMODRAFT_44478 [Selaginella moellendorffii]
gi|300162294|gb|EFJ28907.1| hypothetical protein SELMODRAFT_64568 [Selaginella moellendorffii]
Length = 425
Score = 474 bits (1219), Expect = e-131, Method: Compositional matrix adjust.
Identities = 260/431 (60%), Positives = 307/431 (71%), Gaps = 46/431 (10%)
Query: 11 QQQQQALMQQALLQQQS--LYHPGLLAA-PQIEPIPSGNLPPGFDPSTCRSVYVGNIHTQ 67
QQ +QALMQQA + QQ HPGL+ A QIEPIPSGNLPPGFD ++CRSVYVGNIH +
Sbjct: 6 QQWKQALMQQAAVLQQQQPFLHPGLITAMSQIEPIPSGNLPPGFDATSCRSVYVGNIHIK 65
Query: 68 VTEPLLQEVFSSTGPVEGCKLIRKDKSSYGFIHYFDRRSAAMAILSLNGRHLFGQPIKVN 127
VTE LL EVF++ GP+EGCKLI+K+KSSYGF+ YFD RSAA AI++LNG+ +FGQ IKVN
Sbjct: 66 VTEALLAEVFATVGPLEGCKLIKKEKSSYGFVDYFDHRSAAAAIITLNGKLIFGQSIKVN 125
Query: 128 WAYASGQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGF 187
WAYASGQREDT+GH+NIFVGDLSPEVTDATL+A F +YP CSDARVMWDQ++GRSRG+GF
Sbjct: 126 WAYASGQREDTTGHYNIFVGDLSPEVTDATLYAAFFMYPGCSDARVMWDQRSGRSRGYGF 185
Query: 188 VSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELT------- 240
VSFR++Q+A+ AIN++ GKWLGSR IRCNWATK G+ ED + SV E
Sbjct: 186 VSFRSKQEAERAINEMNGKWLGSRPIRCNWATKSTGSQEDVPTPGPVSVPEQVAVVQVQM 245
Query: 241 ------NGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEV 294
+ EDG + PENNPQ+TTVYVGNLA EVTQ +LHR FH+LG GVIE+V
Sbjct: 246 KQEPNHDEQHEDG--AMQLDGPENNPQFTTVYVGNLAHEVTQTELHRQFHALGVGVIEDV 303
Query: 295 RVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSKPTPPGTSSNPLPPP 354
RVQ++KGFGFVRY TH EAA AIQ N + GK +KCSWGSKPTP G SSNPLPPP
Sbjct: 304 RVQKEKGFGFVRYRTHEEAAYAIQAAN---GRVICGKSVKCSWGSKPTPAGASSNPLPPP 360
Query: 355 -----------AAAPIPGLSAADLLAYERQIAMSKMGGVHALMHPQAQHPLKQAAMGVGS 403
AA SAADLLAY+R S G QA PL Q G+
Sbjct: 361 PPVALPLQSLMAAGMNQAYSAADLLAYQRLSQSSGTG--------QALLPLPQQ----GT 408
Query: 404 AGASQAIYDGF 414
+G+ ++DG
Sbjct: 409 SGSR--VFDGI 417
>gi|94442922|emb|CAJ91135.1| oligouridylate binding protein [Platanus x acerifolia]
Length = 229
Score = 451 bits (1159), Expect = e-124, Method: Compositional matrix adjust.
Identities = 208/229 (90%), Positives = 221/229 (96%)
Query: 80 TGPVEGCKLIRKDKSSYGFIHYFDRRSAAMAILSLNGRHLFGQPIKVNWAYASGQREDTS 139
TGP+EGCKLIRK+ SSYGF+ YFDRRSAA+AIL+LNGRHLFGQ IKVNWAYASGQREDTS
Sbjct: 1 TGPLEGCKLIRKENSSYGFVDYFDRRSAALAILTLNGRHLFGQAIKVNWAYASGQREDTS 60
Query: 140 GHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSA 199
GHFNIFVGDLSPEVTDATLFAC SVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSA
Sbjct: 61 GHFNIFVGDLSPEVTDATLFACLSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSA 120
Query: 200 INDLTGKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENN 259
INDLTGKWLGSRQIRCNWA KGAG N+DKQ++DAKSVVELT+G+SEDG+ET N +APENN
Sbjct: 121 INDLTGKWLGSRQIRCNWAAKGAGANDDKQNTDAKSVVELTSGTSEDGQETINDDAPENN 180
Query: 260 PQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYS 308
PQYTTVYVGNLAPEVTQLDLHRHFH+LGAGVIEEVRVQRDKGFGFVRYS
Sbjct: 181 PQYTTVYVGNLAPEVTQLDLHRHFHALGAGVIEEVRVQRDKGFGFVRYS 229
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 72/163 (44%), Gaps = 45/163 (27%)
Query: 185 FGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSS 244
+GFV + +++ A AI L G+ L + I+ NWA +G ED T+G
Sbjct: 17 YGFVDYFDRRSAALAILTLNGRHLFGQAIKVNWAY-ASGQRED------------TSG-- 61
Query: 245 EDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLG-------AGVIEEVRVQ 297
+ ++VG+L+PEVT L F L A V+ + +
Sbjct: 62 -----------------HFNIFVGDLSPEVTDATL---FACLSVYPSCSDARVMWDQKTG 101
Query: 298 RDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSK 340
R +GFGFV + +A AI N +L +Q++C+W +K
Sbjct: 102 RSRGFGFVSFRNQQDAQSAI---NDLTGKWLGSRQIRCNWAAK 141
>gi|147797908|emb|CAN69464.1| hypothetical protein VITISV_023045 [Vitis vinifera]
Length = 844
Score = 451 bits (1159), Expect = e-124, Method: Compositional matrix adjust.
Identities = 229/361 (63%), Positives = 266/361 (73%), Gaps = 44/361 (12%)
Query: 94 SSYGFIHYFDRRSAAMAILSLNGRHLFGQPIKVNWAYASGQREDTSGHFNIFVGDLSPEV 153
SSYGF+ Y DR SA++AI++L+GR ++GQ +KVNWAYASGQREDTSGHFNIFVGDLSPEV
Sbjct: 182 SSYGFVDYLDRASASLAIMTLHGRQVYGQALKVNWAYASGQREDTSGHFNIFVGDLSPEV 241
Query: 154 TDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQI 213
TDATL+ACFSV+ SCSDARVMWD KTGRS+G+GFVSFRNQQDAQSAINDL+GKWLG+RQI
Sbjct: 242 TDATLYACFSVFASCSDARVMWDHKTGRSKGYGFVSFRNQQDAQSAINDLSGKWLGNRQI 301
Query: 214 RCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPE 273
RCNWATKGAG NEDKQ ++ ++ V LTNGSS+ +E TN EAPENNP YTTVYVGNL+ E
Sbjct: 302 RCNWATKGAGFNEDKQVNENQNAVVLTNGSSDGSQENTNEEAPENNPAYTTVYVGNLSHE 361
Query: 274 ----------------------------VTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFV 305
VTQ +LH FH+LGAGVIEEVR+QRDKGFGFV
Sbjct: 362 FLTEIIIFSGFLSVVRSIFSLTFDLCAQVTQAELHCQFHALGAGVIEEVRIQRDKGFGFV 421
Query: 306 RYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSKPTPPGTSSNPLPPPA--------AA 357
RY TH EAALAIQM N + GK MKCSWGSKPTP GT+SNPLPPPA A
Sbjct: 422 RYHTHEEAALAIQMAN---GRIVRGKSMKCSWGSKPTPLGTASNPLPPPAQPYQILPTAG 478
Query: 358 PIPGLSAADLLAYERQIAMSKMGGV----HALMHPQAQHPLKQAAMGVGSAGASQAIYDG 413
G S A+LLAY+RQ+A+S+ ALM H L +MGV S+G +QA+YDG
Sbjct: 479 INQGYSPAELLAYQRQLALSQAAASSLSGQALMQMTGHHGLAAGSMGV-SSGGTQAMYDG 537
Query: 414 F 414
+
Sbjct: 538 Y 538
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/229 (22%), Positives = 99/229 (43%), Gaps = 60/229 (26%)
Query: 52 DPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKS----SYGFIHYFDRRSA 107
D S +++VG++ +VT+ L FS +++ K+ YGF+ + +++ A
Sbjct: 225 DTSGHFNIFVGDLSPEVTDATLYACFSVFASCSDARVMWDHKTGRSKGYGFVSFRNQQDA 284
Query: 108 AMAILSLNGRHLFGQPIKVNWAY------------------------ASGQREDTS---- 139
AI L+G+ L + I+ NWA + G +E+T+
Sbjct: 285 QSAINDLSGKWLGNRQIRCNWATKGAGFNEDKQVNENQNAVVLTNGSSDGSQENTNEEAP 344
Query: 140 ----GHFNIFVGDLSPE-VTDATLFACF-----SVYPSCSD------------------A 171
+ ++VG+LS E +T+ +F+ F S++ D A
Sbjct: 345 ENNPAYTTVYVGNLSHEFLTEIIIFSGFLSVVRSIFSLTFDLCAQVTQAELHCQFHALGA 404
Query: 172 RVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATK 220
V+ + + R +GFGFV + ++A AI G+ + + ++C+W +K
Sbjct: 405 GVIEEVRIQRDKGFGFVRYHTHEEAALAIQMANGRIVRGKSMKCSWGSK 453
>gi|148807187|gb|ABR13303.1| putative oligouridylate-binding protein [Prunus dulcis]
Length = 233
Score = 441 bits (1134), Expect = e-121, Method: Compositional matrix adjust.
Identities = 204/229 (89%), Positives = 218/229 (95%)
Query: 80 TGPVEGCKLIRKDKSSYGFIHYFDRRSAAMAILSLNGRHLFGQPIKVNWAYASGQREDTS 139
TGP+EGCKLIRKDKSSYGF+ YFDRRSAA AI++LNGRHLFGQPIKVNWAYAS QREDTS
Sbjct: 5 TGPLEGCKLIRKDKSSYGFVDYFDRRSAAYAIVTLNGRHLFGQPIKVNWAYASSQREDTS 64
Query: 140 GHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSA 199
GHFNIFVGDLSPEVTDATLFACFSVY SCSDARVMWDQKTGRSRGFGFVSFR+QQDAQSA
Sbjct: 65 GHFNIFVGDLSPEVTDATLFACFSVYSSCSDARVMWDQKTGRSRGFGFVSFRSQQDAQSA 124
Query: 200 INDLTGKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENN 259
INDL GKWLGSRQIRCNWATKGA +N+DKQSSD+KSVVELTNG+SEDG+E N +APENN
Sbjct: 125 INDLNGKWLGSRQIRCNWATKGATSNDDKQSSDSKSVVELTNGTSEDGQEKPNEDAPENN 184
Query: 260 PQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYS 308
PQYTTVYVGNLAPEVT +DLHRHFHSLGAG IE+VRVQRDKGFGFVR+S
Sbjct: 185 PQYTTVYVGNLAPEVTSVDLHRHFHSLGAGTIEDVRVQRDKGFGFVRFS 233
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 75/169 (44%), Gaps = 43/169 (25%)
Query: 185 FGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSS 244
+GFV + +++ A AI L G+ L + I+ NWA A S E T+G
Sbjct: 21 YGFVDYFDRRSAAYAIVTLNGRHLFGQPIKVNWAY-------------ASSQREDTSG-- 65
Query: 245 EDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLG----AGVIEEVRVQRDK 300
+ ++VG+L+PEVT L F A V+ + + R +
Sbjct: 66 -----------------HFNIFVGDLSPEVTDATLFACFSVYSSCSDARVMWDQKTGRSR 108
Query: 301 GFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSKPTPPGTSSN 349
GFGFV + + +A AI N +L +Q++C+W +K G +SN
Sbjct: 109 GFGFVSFRSQQDAQSAI---NDLNGKWLGSRQIRCNWATK----GATSN 150
>gi|4680340|gb|AAD27631.1|AF128457_5 putative nucleolysin [Oryza sativa Indica Group]
Length = 391
Score = 440 bits (1132), Expect = e-121, Method: Compositional matrix adjust.
Identities = 237/380 (62%), Positives = 265/380 (69%), Gaps = 56/380 (14%)
Query: 35 AAPQIEPIPSGNLPPGFDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKS 94
AAPQIEPI SGNLPPGFD STCRSVYVGNIH QVT+ LL EVF S GPVEGCKLIRK+KS
Sbjct: 57 AAPQIEPIVSGNLPPGFDSSTCRSVYVGNIHLQVTDSLLHEVFQSIGPVEGCKLIRKEKS 116
Query: 95 SYGFIHYFDRRSAAMAILSLNGRHLFGQPIKVNWAYASGQREDTSGHFNIFVGDLSPEVT 154
S+GF+ Y+DRRSAA+AI+SLNGR L
Sbjct: 117 SFGFVDYYDRRSAAIAIVSLNGRQL----------------------------------- 141
Query: 155 DATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIR 214
DARVMWDQKTGRSRGFGFVSFRNQQDAQ+AIN+L GKWLG+RQ+R
Sbjct: 142 ---------------DARVMWDQKTGRSRGFGFVSFRNQQDAQNAINELNGKWLGNRQVR 186
Query: 215 CNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEV 274
CNWATKGA E+KQ++D+K ++ELTNGSSE GK+ N + PENNPQYTTVYVGNL +V
Sbjct: 187 CNWATKGANAGEEKQNTDSKGMIELTNGSSEGGKDNANEDGPENNPQYTTVYVGNLPHDV 246
Query: 275 TQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMK 334
D+HR FHSLG G IEEVRV RDKGFGFVRYSTH EAALAIQ GN + G+Q+K
Sbjct: 247 NSNDVHRFFHSLGVGSIEEVRVTRDKGFGFVRYSTHEEAALAIQTGN---GQLIGGRQIK 303
Query: 335 CSWGSKPTPPG-TSSNPLPPPAAAPIPGLSAADLLAYERQIAMSKMGGVHALMHPQAQHP 393
CSWGSKPTPPG S+ PP PG+SA DLLAYER +A+SKM ALM A
Sbjct: 304 CSWGSKPTPPGTASAPLPPPAPTPFNPGMSATDLLAYERTLALSKMAANPALMSQHA--A 361
Query: 394 LKQAAMGVGSAGASQAIYDG 413
LKQAA AGASQAIYDG
Sbjct: 362 LKQAAAMGMGAGASQAIYDG 381
>gi|168027694|ref|XP_001766364.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162682273|gb|EDQ68692.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 405
Score = 438 bits (1127), Expect = e-120, Method: Compositional matrix adjust.
Identities = 229/379 (60%), Positives = 286/379 (75%), Gaps = 26/379 (6%)
Query: 38 QIEPIPSGNLPPGFDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSSYG 97
Q+EP+ SGNLPPGFD ++CRSVYVGNIH++VTE LL EVF+S GP+EGCKLIRKDKSSYG
Sbjct: 2 QMEPMASGNLPPGFDATSCRSVYVGNIHSRVTEGLLAEVFASLGPLEGCKLIRKDKSSYG 61
Query: 98 FIHYFDRRSAAMAILSLNGRHLFGQPIKVNWAYASGQREDTS-GHFNIFVGDLSPEVTDA 156
F+ YFD RSA A+ +LNGR +FGQ IKVNWAYASGQREDT+ GHFN+FVGDLS EVTDA
Sbjct: 62 FVDYFDHRSAVAALSTLNGRQMFGQSIKVNWAYASGQREDTTAGHFNVFVGDLSAEVTDA 121
Query: 157 TLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCN 216
TLFA F +YPSCSDARVMWDQ++GRSRGFGFVSFR+QQ+A+S+I+++TGKWLG+R IRCN
Sbjct: 122 TLFAAFCIYPSCSDARVMWDQRSGRSRGFGFVSFRSQQEAESSISEMTGKWLGTRPIRCN 181
Query: 217 WATKGAGN---NEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPE 273
WA K +E K ++ ++ L + SED ++++ + PE N QYTTVYVGNL+ +
Sbjct: 182 WAAKTNNTIQADESKLTTRGLTLCCLADVRSEDRQDSSAGDGPEINSQYTTVYVGNLSQQ 241
Query: 274 VTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQM 333
+TQ +LHR FHSLGAGVIE+VRVQ++KGFGFVRY THAEAA AIQ N ++GK +
Sbjct: 242 ITQAELHRQFHSLGAGVIEDVRVQKEKGFGFVRYRTHAEAAFAIQAAN---GRVIWGKSL 298
Query: 334 KCSWGSKPTPPGTSSNPLPPP----------AAAPIPGLSAADLLAYERQIAMSKMGGVH 383
KCSWGSKPT PG SS PLP P A+ G AD+LAY+ +++ G
Sbjct: 299 KCSWGSKPTQPGASSAPLPSPPSVGHYQGIMASGVNLGYGVADILAYQN---LTRAGAGR 355
Query: 384 ALMHPQAQHPLKQAAMGVG 402
AL+ P+ ++G+G
Sbjct: 356 ALL------PVPHQSLGMG 368
>gi|4680498|gb|AAD27678.1|AF119222_10 TIA-1 related protein [Oryza sativa Japonica Group]
Length = 522
Score = 432 bits (1111), Expect = e-118, Method: Compositional matrix adjust.
Identities = 235/376 (62%), Positives = 263/376 (69%), Gaps = 56/376 (14%)
Query: 39 IEPIPSGNLPPGFDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSSYGF 98
IEPI SGNLPPGFD STCRSVYVGNIH QVT+ LL EVF S GPVEGCKLIRK+KSS+GF
Sbjct: 192 IEPIVSGNLPPGFDSSTCRSVYVGNIHLQVTDSLLHEVFQSIGPVEGCKLIRKEKSSFGF 251
Query: 99 IHYFDRRSAAMAILSLNGRHLFGQPIKVNWAYASGQREDTSGHFNIFVGDLSPEVTDATL 158
+ Y+DRRSAA+AI+SLNGR L
Sbjct: 252 VDYYDRRSAAIAIVSLNGRQL--------------------------------------- 272
Query: 159 FACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWA 218
DARVMWDQKTGRSRGFGFVSFRNQQDAQ+AIN+L GKWLG+RQ+RCNWA
Sbjct: 273 -----------DARVMWDQKTGRSRGFGFVSFRNQQDAQNAINELNGKWLGNRQVRCNWA 321
Query: 219 TKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLD 278
TKGA E+KQ++D+K ++ELTNGSSE GK+ N + PENNPQYTTVYVGNL +V D
Sbjct: 322 TKGANAGEEKQNTDSKGMIELTNGSSEGGKDNANEDGPENNPQYTTVYVGNLPHDVNSND 381
Query: 279 LHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWG 338
+HR FHSLG G IEEVRV RDKGFGFVRYSTH EAALAIQ GN + G+Q+KCSWG
Sbjct: 382 VHRFFHSLGVGSIEEVRVTRDKGFGFVRYSTHEEAALAIQTGN---GQLIGGRQIKCSWG 438
Query: 339 SKPTPPGT-SSNPLPPPAAAPIPGLSAADLLAYERQIAMSKMGGVHALMHPQAQHPLKQA 397
SKPTPPGT S+ PP A PG+SA DLLAYER +A+SKM ALM A LKQA
Sbjct: 439 SKPTPPGTASAPLPPPAPAPFNPGMSATDLLAYERTLALSKMAANPALMSQHAA--LKQA 496
Query: 398 AMGVGSAGASQAIYDG 413
A AGASQAIYDG
Sbjct: 497 AAMGMGAGASQAIYDG 512
>gi|326531842|dbj|BAK01297.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 291
Score = 415 bits (1066), Expect = e-113, Method: Compositional matrix adjust.
Identities = 193/245 (78%), Positives = 214/245 (87%)
Query: 30 HPGLLAAPQIEPIPSGNLPPGFDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLI 89
HPGLLAAP IEPI SGNLPPGFD STCRSVYVGNIH QVT+ LL EVF S GPVEGCKLI
Sbjct: 45 HPGLLAAPHIEPIVSGNLPPGFDSSTCRSVYVGNIHLQVTDSLLHEVFQSIGPVEGCKLI 104
Query: 90 RKDKSSYGFIHYFDRRSAAMAILSLNGRHLFGQPIKVNWAYASGQREDTSGHFNIFVGDL 149
RK+KSS+GF+ Y+DRR AA+AI+SLNGR LFGQPIKVNWAYAS QREDTSGHFNIFVGDL
Sbjct: 105 RKEKSSFGFVDYYDRRYAALAIVSLNGRQLFGQPIKVNWAYASTQREDTSGHFNIFVGDL 164
Query: 150 SPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLG 209
PEVTDA LF FS Y +CSDARVMWDQ++GRSRGFGFVSFRNQQDAQ+AIN+L GKWLG
Sbjct: 165 CPEVTDAALFVFFSAYSTCSDARVMWDQQSGRSRGFGFVSFRNQQDAQTAINELNGKWLG 224
Query: 210 SRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGN 269
+RQIRCNWATKGA E KQS+D+K +VEL +GSSE GKE N + PE+NPQYTTVYVGN
Sbjct: 225 NRQIRCNWATKGANAGEVKQSTDSKGMVELISGSSEAGKENANEDGPEDNPQYTTVYVGN 284
Query: 270 LAPEV 274
L+ +V
Sbjct: 285 LSHDV 289
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 93/208 (44%), Gaps = 43/208 (20%)
Query: 137 DTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDA 196
D+S +++VG++ +VTD+ L F +++ +K+ FGFV + +++ A
Sbjct: 67 DSSTCRSVYVGNIHLQVTDSLLHEVFQSIGPVEGCKLIRKEKSS----FGFVDYYDRRYA 122
Query: 197 QSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAP 256
AI L G+ L + I+ NWA A + E T+G
Sbjct: 123 ALAIVSLNGRQLFGQPIKVNWAY-------------ASTQREDTSG-------------- 155
Query: 257 ENNPQYTTVYVGNLAPEVTQLDLHRHFHSLG----AGVIEEVRVQRDKGFGFVRYSTHAE 312
+ ++VG+L PEVT L F + A V+ + + R +GFGFV + +
Sbjct: 156 -----HFNIFVGDLCPEVTDAALFVFFSAYSTCSDARVMWDQQSGRSRGFGFVSFRNQQD 210
Query: 313 AALAIQMGNTTQSSYLFGKQMKCSWGSK 340
A AI N +L +Q++C+W +K
Sbjct: 211 AQTAI---NELNGKWLGNRQIRCNWATK 235
Score = 46.6 bits (109), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 43/81 (53%), Gaps = 7/81 (8%)
Query: 264 TVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDK--GFGFVRYSTHAEAALAIQMGN 321
+VYVGN+ +VT LH F S+G +E ++ R + FGFV Y AALAI N
Sbjct: 73 SVYVGNIHLQVTDSLLHEVFQSIGP--VEGCKLIRKEKSSFGFVDYYDRRYAALAIVSLN 130
Query: 322 TTQSSYLFGKQMKCSWGSKPT 342
Q LFG+ +K +W T
Sbjct: 131 GRQ---LFGQPIKVNWAYAST 148
>gi|357479383|ref|XP_003609977.1| RNA-binding protein [Medicago truncatula]
gi|355511032|gb|AES92174.1| RNA-binding protein [Medicago truncatula]
Length = 245
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 183/231 (79%), Positives = 205/231 (88%), Gaps = 2/231 (0%)
Query: 15 QALMQQALLQQQSLY-HPGLLAAPQIEPIPSGNLPPGFDPSTCRSVYVGNIHTQVTEPLL 73
Q Q +++Q SLY HP L+ PQIEPI SGNLPPGFD STCRSVYVGNIH QV+EPLL
Sbjct: 4 QKFRQNPMIEQHSLYQHPALIT-PQIEPILSGNLPPGFDSSTCRSVYVGNIHPQVSEPLL 62
Query: 74 QEVFSSTGPVEGCKLIRKDKSSYGFIHYFDRRSAAMAILSLNGRHLFGQPIKVNWAYASG 133
QE+FSS G +EGCKLIRK+KSSYGF+ YFDR SAA+AI++LNGR++FGQ IKVNWAY G
Sbjct: 63 QELFSSAGALEGCKLIRKEKSSYGFVDYFDRSSAAIAIVTLNGRNIFGQSIKVNWAYTRG 122
Query: 134 QREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQ 193
QREDTSGHF+IFVGDLSPEVTDATL+ACFS Y SCSDARVMWDQKTGRSRGFGFVSFRNQ
Sbjct: 123 QREDTSGHFHIFVGDLSPEVTDATLYACFSAYSSCSDARVMWDQKTGRSRGFGFVSFRNQ 182
Query: 194 QDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSS 244
Q+AQSAINDLTGKWLGSRQIRCNWATKGA N + QSS++KSVVELT+G+S
Sbjct: 183 QEAQSAINDLTGKWLGSRQIRCNWATKGANMNGENQSSESKSVVELTSGTS 233
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 94/208 (45%), Gaps = 43/208 (20%)
Query: 137 DTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDA 196
D+S +++VG++ P+V++ L FS + +++ +K+ +GFV + ++ A
Sbjct: 41 DSSTCRSVYVGNIHPQVSEPLLQELFSSAGALEGCKLIRKEKSS----YGFVDYFDRSSA 96
Query: 197 QSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAP 256
AI L G+ + + I+ NWA T G ED
Sbjct: 97 AIAIVTLNGRNIFGQSIKVNWA--------------------YTRGQRED---------- 126
Query: 257 ENNPQYTTVYVGNLAPEVTQLDLHRHFHSLG----AGVIEEVRVQRDKGFGFVRYSTHAE 312
+ ++VG+L+PEVT L+ F + A V+ + + R +GFGFV + E
Sbjct: 127 --TSGHFHIFVGDLSPEVTDATLYACFSAYSSCSDARVMWDQKTGRSRGFGFVSFRNQQE 184
Query: 313 AALAIQMGNTTQSSYLFGKQMKCSWGSK 340
A AI N +L +Q++C+W +K
Sbjct: 185 AQSAI---NDLTGKWLGSRQIRCNWATK 209
>gi|255634993|gb|ACU17855.1| unknown [Glycine max]
Length = 210
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 198/208 (95%), Positives = 202/208 (97%)
Query: 1 MQHQRLKQQQQQQQQALMQQALLQQQSLYHPGLLAAPQIEPIPSGNLPPGFDPSTCRSVY 60
MQ+ RLKQQQQQQQQALMQQALLQQQSLYHPGLLA PQIEP PSGNLPPGFDPSTCRSVY
Sbjct: 1 MQNHRLKQQQQQQQQALMQQALLQQQSLYHPGLLAPPQIEPYPSGNLPPGFDPSTCRSVY 60
Query: 61 VGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSSYGFIHYFDRRSAAMAILSLNGRHLF 120
VGNIHTQVTEPLLQEVFS TGPVEGCKLIRKDKSSYGFIHYFDRRSAA+AILSLNGRHLF
Sbjct: 61 VGNIHTQVTEPLLQEVFSGTGPVEGCKLIRKDKSSYGFIHYFDRRSAALAILSLNGRHLF 120
Query: 121 GQPIKVNWAYASGQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTG 180
GQPIKVNWAY SGQREDTSGH+NIFVGDLSPEVTDATLFAC SVYPSCSDARVMWDQKTG
Sbjct: 121 GQPIKVNWAYTSGQREDTSGHYNIFVGDLSPEVTDATLFACSSVYPSCSDARVMWDQKTG 180
Query: 181 RSRGFGFVSFRNQQDAQSAINDLTGKWL 208
RSRGFGFVSFRNQQDAQS+INDLTGKWL
Sbjct: 181 RSRGFGFVSFRNQQDAQSSINDLTGKWL 208
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 78/185 (42%), Gaps = 40/185 (21%)
Query: 137 DTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDA 196
D S +++VG++ +VT+ L FS +++ K+ +GF+ + +++ A
Sbjct: 52 DPSTCRSVYVGNIHTQVTEPLLQEVFSGTGPVEGCKLIRKDKSS----YGFIHYFDRRSA 107
Query: 197 QSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAP 256
AI L G+ L + I+ NWA T+G ED N
Sbjct: 108 ALAILSLNGRHLFGQPIKVNWA--------------------YTSGQREDTSGHYN---- 143
Query: 257 ENNPQYTTVYVGNLAPEVTQLDLHR----HFHSLGAGVIEEVRVQRDKGFGFVRYSTHAE 312
++VG+L+PEVT L + A V+ + + R +GFGFV + +
Sbjct: 144 --------IFVGDLSPEVTDATLFACSSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQD 195
Query: 313 AALAI 317
A +I
Sbjct: 196 AQSSI 200
>gi|218201471|gb|EEC83898.1| hypothetical protein OsI_29913 [Oryza sativa Indica Group]
Length = 407
Score = 376 bits (966), Expect = e-101, Method: Compositional matrix adjust.
Identities = 210/391 (53%), Positives = 256/391 (65%), Gaps = 64/391 (16%)
Query: 38 QIEPIPSGNLPPGFDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSSYG 97
Q+EPI +GNLPPGFDPSTCRSVYVGN+H VTE LL EVF S+G VE CKLIRK+KSS+G
Sbjct: 54 QMEPISNGNLPPGFDPSTCRSVYVGNVHPNVTESLLIEVFQSSGLVERCKLIRKEKSSFG 113
Query: 98 FIHYFDRRSAAMAILSLNGRHLFGQPIKVNWAYASGQREDTSGHFNIFVGDLSPEVTDAT 157
F+ Y+DRRSAA+AI++L+GRH+ GQ IKVNWAYAS QREDTS
Sbjct: 114 FVDYYDRRSAALAIMTLHGRHICGQAIKVNWAYASTQREDTS----------------VM 157
Query: 158 LFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNW 217
L +C P + +A++AI ++TGKWLGSRQIRCNW
Sbjct: 158 LESCGITKPDAPE------------------------EAETAITEMTGKWLGSRQIRCNW 193
Query: 218 ATKGAGNNEDKQSSDAKSVVELTNGSS-----EDGKETTNTEAPENNPQYTTVYVGNLAP 272
ATK N E+KQ +D + V LTNGSS E ++T + E PENNP TTVYVGNL
Sbjct: 194 ATKN--NAEEKQETDNHNAVVLTNGSSSNPGMEASQDTGSKENPENNPDCTTVYVGNLGH 251
Query: 273 EVTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQ 332
EV + +LHRHF++LG G IEEVRVQ+DKGFGFVRYS H EAALAIQM N + GK
Sbjct: 252 EVNRDELHRHFYNLGVGAIEEVRVQQDKGFGFVRYSNHGEAALAIQMANGL---VVRGKP 308
Query: 333 MKCSWGSKPTPPGTSSNPL--------PPPAAAPIPGLSAADLLAYERQIAMSKMGGVHA 384
+KCSWG+KPTPPGTSS PL P P A G SAAD++AY+RQ+ +S++ A
Sbjct: 309 IKCSWGNKPTPPGTSSKPLPPPLPSYQPVPMAGVPQGFSAADIVAYQRQLTLSQV----A 364
Query: 385 LMHPQAQHPLK-QAAMGVGSAGASQAIYDGF 414
QH L Q + G+ +AG SQA+YDG+
Sbjct: 365 AGQIAGQHGLAGQVSAGLLAAG-SQALYDGY 394
>gi|449488215|ref|XP_004157970.1| PREDICTED: uncharacterized protein LOC101232331 [Cucumis sativus]
Length = 343
Score = 306 bits (783), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 155/219 (70%), Positives = 179/219 (81%), Gaps = 10/219 (4%)
Query: 202 DLTGKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQ 261
D GKWLGSRQIRCNWATKGA + +DKQSSD++SVVELT+G+S+ G+E +N +APENNPQ
Sbjct: 114 DDKGKWLGSRQIRCNWATKGANSGDDKQSSDSRSVVELTSGTSDGGQEKSNEDAPENNPQ 173
Query: 262 YTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGN 321
YTTVYVGNLAPEVT +DLHR+FH+LGAG IE+VRVQRDKGFGFVRYST+AEAALAIQ GN
Sbjct: 174 YTTVYVGNLAPEVTSVDLHRYFHALGAGTIEDVRVQRDKGFGFVRYSTNAEAALAIQTGN 233
Query: 322 TTQSSYLFGKQMKCSWGSKPTPPGTSSNPLPPPAAAPIPGLSAADLLAYERQIAMSKMGG 381
+ + GK +KCSWGSKPTPPGT+S PLPPP I GLSAADL +YERQ+A+SKMG
Sbjct: 234 ---ARVVCGKPIKCSWGSKPTPPGTNSTPLPPPNVGHISGLSAADLASYERQMALSKMGA 290
Query: 382 VHALMHPQ-AQHPLKQ------AAMGVGSAGASQAIYDG 413
ALMHPQ AQH LKQ +G+G AG SQ IYDG
Sbjct: 291 AQALMHPQAAQHALKQAAMGMGMGIGMGGAGTSQTIYDG 329
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 43/73 (58%), Gaps = 4/73 (5%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSS--TGPVEGCKLIRKDKSSYGFIHYFDRRSAAMAILSLN 115
+VYVGN+ +VT L F + G +E + +++DK +GF+ Y AA+AI + N
Sbjct: 176 TVYVGNLAPEVTSVDLHRYFHALGAGTIEDVR-VQRDKG-FGFVRYSTNAEAALAIQTGN 233
Query: 116 GRHLFGQPIKVNW 128
R + G+PIK +W
Sbjct: 234 ARVVCGKPIKCSW 246
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 42/85 (49%), Gaps = 4/85 (4%)
Query: 136 EDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQD 195
E+ + ++VG+L+PEVT L F A + D + R +GFGFV + +
Sbjct: 169 ENNPQYTTVYVGNLAPEVTSVDLHRYFHAL----GAGTIEDVRVQRDKGFGFVRYSTNAE 224
Query: 196 AQSAINDLTGKWLGSRQIRCNWATK 220
A AI + + + I+C+W +K
Sbjct: 225 AALAIQTGNARVVCGKPIKCSWGSK 249
>gi|413919829|gb|AFW59761.1| hypothetical protein ZEAMMB73_712339 [Zea mays]
gi|413919830|gb|AFW59762.1| hypothetical protein ZEAMMB73_712339 [Zea mays]
Length = 437
Score = 292 bits (747), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 142/189 (75%), Positives = 154/189 (81%)
Query: 19 QQALLQQQSLYHPGLLAAPQIEPIPSGNLPPGFDPSTCRSVYVGNIHTQVTEPLLQEVFS 78
+ AL +Q+ + G IEPI SGNLPPGFD STCRSVYV NIH QVT+ +LQEVF
Sbjct: 238 EMALRRQRRKGNGGDGVRETIEPIVSGNLPPGFDSSTCRSVYVCNIHLQVTDAVLQEVFQ 297
Query: 79 STGPVEGCKLIRKDKSSYGFIHYFDRRSAAMAILSLNGRHLFGQPIKVNWAYASGQREDT 138
S GPVEGCKLIRK+KSS+GFI Y DRR AA+AILSLNGR L+GQPIKVNWAY S RE T
Sbjct: 298 SIGPVEGCKLIRKEKSSFGFIDYHDRRYAALAILSLNGRQLYGQPIKVNWAYTSTPREGT 357
Query: 139 SGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQS 198
SGHFNIFVGDL PEVTDATLFA FS Y +CSDA VMWDQKTGRSRGFGFVSFRNQQDAQS
Sbjct: 358 SGHFNIFVGDLCPEVTDATLFAFFSGYSTCSDASVMWDQKTGRSRGFGFVSFRNQQDAQS 417
Query: 199 AINDLTGKW 207
INDL G +
Sbjct: 418 EINDLNGVF 426
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 80/198 (40%), Gaps = 42/198 (21%)
Query: 137 DTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDA 196
D+S +++V ++ +VTDA L F +++ +K+ FGF+ + +++ A
Sbjct: 271 DSSTCRSVYVCNIHLQVTDAVLQEVFQSIGPVEGCKLIRKEKSS----FGFIDYHDRRYA 326
Query: 197 QSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAP 256
AI L G+ L + I+ NWA T P
Sbjct: 327 ALAILSLNGRQLYGQPIKVNWAY---------------------------------TSTP 353
Query: 257 -ENNPQYTTVYVGNLAPEVTQLDLHRHFHSLG----AGVIEEVRVQRDKGFGFVRYSTHA 311
E + ++VG+L PEVT L F A V+ + + R +GFGFV +
Sbjct: 354 REGTSGHFNIFVGDLCPEVTDATLFAFFSGYSTCSDASVMWDQKTGRSRGFGFVSFRNQQ 413
Query: 312 EAALAIQMGNTTQSSYLF 329
+A I N SS +F
Sbjct: 414 DAQSEINDLNGVFSSSMF 431
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 51/109 (46%), Gaps = 7/109 (6%)
Query: 264 TVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDK--GFGFVRYSTHAEAALAIQMGN 321
+VYV N+ +VT L F S+G +E ++ R + FGF+ Y AALAI N
Sbjct: 277 SVYVCNIHLQVTDAVLQEVFQSIGP--VEGCKLIRKEKSSFGFIDYHDRRYAALAILSLN 334
Query: 322 TTQSSYLFGKQMKCSWGSKPTPPGTSSNPLPPPAAAPIPGLSAADLLAY 370
Q L+G+ +K +W TP +S P ++ A L A+
Sbjct: 335 GRQ---LYGQPIKVNWAYTSTPREGTSGHFNIFVGDLCPEVTDATLFAF 380
>gi|388511131|gb|AFK43627.1| unknown [Lotus japonicus]
Length = 167
Score = 280 bits (716), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 127/151 (84%), Positives = 139/151 (92%)
Query: 44 SGNLPPGFDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSSYGFIHYFD 103
SGNLPPGFD STCRSVYVGNIH QVT+ LLQE+F+ G +EGCKLIRK+KSSYGF+ Y+D
Sbjct: 2 SGNLPPGFDSSTCRSVYVGNIHPQVTDSLLQELFAGAGALEGCKLIRKEKSSYGFVDYYD 61
Query: 104 RRSAAMAILSLNGRHLFGQPIKVNWAYASGQREDTSGHFNIFVGDLSPEVTDATLFACFS 163
R SAA AI++LNGR+LFGQPIKVNWAYA QREDTSGHFNIFVGDLSPEVTDATL+ACFS
Sbjct: 62 RSSAAFAIVTLNGRNLFGQPIKVNWAYARSQREDTSGHFNIFVGDLSPEVTDATLYACFS 121
Query: 164 VYPSCSDARVMWDQKTGRSRGFGFVSFRNQQ 194
YPSCSDARVMWDQ+TGRSRGFGFVSFRNQQ
Sbjct: 122 AYPSCSDARVMWDQQTGRSRGFGFVSFRNQQ 152
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 88/191 (46%), Gaps = 42/191 (21%)
Query: 137 DTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDA 196
D+S +++VG++ P+VTD+ L F+ + +++ +K+ +GFV + ++ A
Sbjct: 10 DSSTCRSVYVGNIHPQVTDSLLQELFAGAGALEGCKLIRKEKSS----YGFVDYYDRSSA 65
Query: 197 QSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAP 256
AI L G+ L + I+ NWA A+S E T+G
Sbjct: 66 AFAIVTLNGRNLFGQPIKVNWAY-------------ARSQREDTSG-------------- 98
Query: 257 ENNPQYTTVYVGNLAPEVTQLDLHRHFHSL----GAGVIEEVRVQRDKGFGFVRYSTHA- 311
+ ++VG+L+PEVT L+ F + A V+ + + R +GFGFV +
Sbjct: 99 -----HFNIFVGDLSPEVTDATLYACFSAYPSCSDARVMWDQQTGRSRGFGFVSFRNQQM 153
Query: 312 -EAALAIQMGN 321
+ L I +G+
Sbjct: 154 PKVLLMISLGS 164
>gi|388519507|gb|AFK47815.1| unknown [Medicago truncatula]
Length = 243
Score = 275 bits (702), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 124/168 (73%), Positives = 144/168 (85%), Gaps = 3/168 (1%)
Query: 29 YHPGLLAAP---QIEPIPSGNLPPGFDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEG 85
+HPG+LAA Q+EP+PSGNLPPGFD S CRSVYVGNIH VT+ LL EVF S GP+ G
Sbjct: 29 HHPGMLAAAAMTQMEPVPSGNLPPGFDASACRSVYVGNIHVNVTDKLLAEVFQSAGPLAG 88
Query: 86 CKLIRKDKSSYGFIHYFDRRSAAMAILSLNGRHLFGQPIKVNWAYASGQREDTSGHFNIF 145
CKLIRK+KSSYGF+ Y DR SAA+AI++L+GR L+GQ +KVNWAYA+ REDTSG FN+F
Sbjct: 89 CKLIRKEKSSYGFVDYHDRASAALAIMTLHGRQLYGQALKVNWAYANSSREDTSGRFNVF 148
Query: 146 VGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQ 193
VGDLSPEVTDATLFACFSVY +CSDARVMWD KTGRS+G+GFVSFR+
Sbjct: 149 VGDLSPEVTDATLFACFSVYTTCSDARVMWDHKTGRSKGYGFVSFRDH 196
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 86/216 (39%), Gaps = 52/216 (24%)
Query: 137 DTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDA 196
D S +++VG++ VTD L F + +++ +K+ +GFV + ++ A
Sbjct: 55 DASACRSVYVGNIHVNVTDKLLAEVFQSAGPLAGCKLIRKEKSS----YGFVDYHDRASA 110
Query: 197 QSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAP 256
AI L G+ L + ++ NWA N S ED N
Sbjct: 111 ALAIMTLHGRQLYGQALKVNWA--------------------YANSSREDTSGRFN---- 146
Query: 257 ENNPQYTTVYVGNLAPEVTQLDLHRHFHSL----GAGVIEEVRVQRDKGFGFVRYSTHA- 311
V+VG+L+PEVT L F A V+ + + R KG+GFV + H
Sbjct: 147 --------VFVGDLSPEVTDATLFACFSVYTTCSDARVMWDHKTGRSKGYGFVSFRDHLK 198
Query: 312 -----------EAALAIQMGNTTQSSYLFGKQMKCS 336
+++L + T FG +++C+
Sbjct: 199 PCMTDMLVIRQDSSLCTIVNGFTSRVVAFGLKLRCA 234
>gi|393218535|gb|EJD04023.1| hypothetical protein FOMMEDRAFT_133373 [Fomitiporia mediterranea
MF3/22]
Length = 422
Score = 254 bits (649), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 142/313 (45%), Positives = 191/313 (61%), Gaps = 24/313 (7%)
Query: 59 VYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKS------SYGFIHYFDRRSAAMAIL 112
+YVGN+ +VTE +L E+F+ GPV+ K+I D++ +YGF+ Y D R+A A+
Sbjct: 15 LYVGNLSPRVTEYMLTEIFAVAGPVQHVKII-PDRNYQHGGLNYGFVEYMDMRAAETALQ 73
Query: 113 SLNGRHLFGQPIKVNWAY-ASGQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDA 171
+LNGR +F I+VNWAY S +EDTSGHF++FVGDLSPEV DA L FS + + SDA
Sbjct: 74 TLNGRKIFDTEIRVNWAYQGSTAKEDTSGHFHVFVGDLSPEVNDAVLAKAFSAFGTLSDA 133
Query: 172 RVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWA---TKGAGNNEDK 228
RVMWD +G+SRG+GF++FR++ DA+ AI + G+WLGSR IR NWA T+GA
Sbjct: 134 RVMWDMNSGKSRGYGFLAFRDKTDAEQAIATMNGEWLGSRAIRVNWANQKTQGAPAPRPT 193
Query: 229 QSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGA 288
+ A + + G ET + P N TTVYVGNL P TQ DL F S+
Sbjct: 194 GAGGAPAPINFQGGPLS--YETVVQQTPAYN---TTVYVGNLVPYCTQADLIPLFQSI-- 246
Query: 289 GVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSKPTPPGT-- 346
G + E+R+Q D+GF FV+ TH AA+AI Q + G+ +KCSWG GT
Sbjct: 247 GYLSEIRMQADRGFAFVKLDTHENAAMAIVQ---LQGQMVHGRPIKCSWGKDRADGGTVQ 303
Query: 347 -SSNPLPPPAAAP 358
++ P PAAAP
Sbjct: 304 PAAAISPNPAAAP 316
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 99/222 (44%), Gaps = 46/222 (20%)
Query: 143 NIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGR-SRGFGFVSFRNQQDAQSAIN 201
+++VG+LSP VT+ L F+V +++ D+ +GFV + + + A++A+
Sbjct: 14 HLYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDRNYQHGGLNYGFVEYMDMRAAETALQ 73
Query: 202 DLTGKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQ 261
L G+ + +IR NWA +G+ ED T+G
Sbjct: 74 TLNGRKIFDTEIRVNWAYQGSTAKED------------TSG------------------- 102
Query: 262 YTTVYVGNLAPEVTQLDLHRHFHSLG----AGVIEEVRVQRDKGFGFVRYSTHAEAALAI 317
+ V+VG+L+PEV L + F + G A V+ ++ + +G+GF+ + +A AI
Sbjct: 103 HFHVFVGDLSPEVNDAVLAKAFSAFGTLSDARVMWDMNSGKSRGYGFLAFRDKTDAEQAI 162
Query: 318 QMGNTTQSSYLFGKQMKCSWGSK-------PTPPGTSSNPLP 352
T +L + ++ +W ++ P P G P P
Sbjct: 163 A---TMNGEWLGSRAIRVNWANQKTQGAPAPRPTGAGGAPAP 201
Score = 45.1 bits (105), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 41/76 (53%), Gaps = 2/76 (2%)
Query: 53 PSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSSYGFIHYFDRRSAAMAIL 112
P+ +VYVGN+ T+ L +F S G + ++ + + F+ +AAMAI+
Sbjct: 219 PAYNTTVYVGNLVPYCTQADLIPLFQSIGYLSEIRM--QADRGFAFVKLDTHENAAMAIV 276
Query: 113 SLNGRHLFGQPIKVNW 128
L G+ + G+PIK +W
Sbjct: 277 QLQGQMVHGRPIKCSW 292
>gi|413921568|gb|AFW61500.1| hypothetical protein ZEAMMB73_921536 [Zea mays]
Length = 409
Score = 251 bits (642), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 142/312 (45%), Positives = 194/312 (62%), Gaps = 47/312 (15%)
Query: 137 DTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQ-- 194
D S +++VG+++P VT++ L F +++ +K+ FGFV + +++
Sbjct: 98 DPSTCRSVYVGNVNPNVTESLLIEVFQSAGLVERCKLIRKEKSS----FGFVDYYDRRSA 153
Query: 195 -----------------DAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVV 237
+A++AI ++TGKWLGSRQIRCNWATK N+E+K +D + V
Sbjct: 154 ALAIMTLHGRHIISFLFEAETAITEMTGKWLGSRQIRCNWATKT--NSEEKPETDNHNAV 211
Query: 238 ELTNGSSEDG-----KETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIE 292
LTNGSS + ++ + E PENNP TTVYVGNL EV + +LHRHF++LG G IE
Sbjct: 212 VLTNGSSTNSATDASQDAGSKENPENNPDCTTVYVGNLGHEVNRDELHRHFYNLGVGAIE 271
Query: 293 EVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSKPTPPGTSSNPLP 352
E+RVQ+DKGFGFVRYSTH EAALAIQM N + GK +KCSWG+KPTPPGT+S PLP
Sbjct: 272 EIRVQQDKGFGFVRYSTHGEAALAIQMANGL---VVRGKSIKCSWGNKPTPPGTTSKPLP 328
Query: 353 PPAAAPIP---------GLSAADLLAYERQIAMSKMGGVHALMHPQAQHPLK-QAAMGVG 402
PP A+ P G +AA+LLAY+RQ+A+S+ A QH L Q + G+
Sbjct: 329 PPVASYQPAVAMSGVPQGFTAAELLAYQRQLALSQA----AAGQIAGQHGLAGQVSAGLL 384
Query: 403 SAGASQAIYDGF 414
+A SQA+YDG+
Sbjct: 385 AAAGSQALYDGY 396
Score = 148 bits (374), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 88/232 (37%), Positives = 120/232 (51%), Gaps = 50/232 (21%)
Query: 39 IEPIPSGNLPPGFDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSSYGF 98
+EPI +GNLPPGFDPSTCRSVYVGN++ VTE LL EVF S G VE CKLIRK+KSS+GF
Sbjct: 85 MEPISNGNLPPGFDPSTCRSVYVGNVNPNVTESLLIEVFQSAGLVERCKLIRKEKSSFGF 144
Query: 99 IHYFDRRSAAMAILSLNGRHLF-------------------GQPIKVNWAYASGQRE--D 137
+ Y+DRRSAA+AI++L+GRH+ + I+ NWA + E +
Sbjct: 145 VDYYDRRSAALAIMTLHGRHIISFLFEAETAITEMTGKWLGSRQIRCNWATKTNSEEKPE 204
Query: 138 TSGHFNIFV--GDLSPEVTDATLFA-----------CFSVYPSCSDARVMWDQ------- 177
T H + + G + TDA+ A C +VY V D+
Sbjct: 205 TDNHNAVVLTNGSSTNSATDASQDAGSKENPENNPDCTTVYVGNLGHEVNRDELHRHFYN 264
Query: 178 ---------KTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATK 220
+ + +GFGFV + +A AI G + + I+C+W K
Sbjct: 265 LGVGAIEEIRVQQDKGFGFVRYSTHGEAALAIQMANGLVVRGKSIKCSWGNK 316
>gi|409083337|gb|EKM83694.1| hypothetical protein AGABI1DRAFT_110331 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 444
Score = 245 bits (625), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 131/291 (45%), Positives = 178/291 (61%), Gaps = 17/291 (5%)
Query: 59 VYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKS------SYGFIHYFDRRSAAMAIL 112
+YVGN+ +VTE +L E+F+ GPV+ K+I D++ +YGF+ Y D RSA A+
Sbjct: 18 LYVGNLSPRVTEYMLTEIFAVAGPVQHVKII-PDRNYQHGGLNYGFVEYMDMRSAETALQ 76
Query: 113 SLNGRHLFGQPIKVNWAYASGQ-REDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDA 171
+LNGR +F I+VNWAY Q +EDTSGH+++FVGDLSPEV D L FS + + SDA
Sbjct: 77 TLNGRKIFDTEIRVNWAYQGQQNKEDTSGHYHVFVGDLSPEVNDDVLAKAFSAFGTLSDA 136
Query: 172 RVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWA---TKGAGNNEDK 228
RVMWD +G+SRG+GF++FR++ DA+ AI + G+WLGSR IR NWA T+G +
Sbjct: 137 RVMWDMNSGKSRGYGFLAFRDKTDAEQAIATMNGEWLGSRAIRVNWANQKTQGGAPAVQQ 196
Query: 229 QSSDAKSVVELTNGSSEDGKETTNTEAPENNPQY-TTVYVGNLAPEVTQLDLHRHFHSLG 287
A S + G + + P Y TTVYVGNL P TQ DL F S+
Sbjct: 197 SPRPAGSTGGAPAPINFQGGPLSYESVVQQTPAYNTTVYVGNLVPYCTQADLIPLFQSI- 255
Query: 288 AGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWG 338
G + E+R+Q D+GF FV+ TH AA+AI Q + G+ +KCSWG
Sbjct: 256 -GYLSEIRMQADRGFAFVKLDTHEHAAMAIVQ---LQGQMVHGRPIKCSWG 302
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 86/206 (41%), Gaps = 46/206 (22%)
Query: 52 DPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKS----SYGFIHYFDRRSA 107
D S V+VG++ +V + +L + FS+ G + +++ S YGF+ + D+ A
Sbjct: 102 DTSGHYHVFVGDLSPEVNDDVLAKAFSAFGTLSDARVMWDMNSGKSRGYGFLAFRDKTDA 161
Query: 108 AMAILSLNGRHLFGQPIKVNWA------------------------------------YA 131
AI ++NG L + I+VNWA Y
Sbjct: 162 EQAIATMNGEWLGSRAIRVNWANQKTQGGAPAVQQSPRPAGSTGGAPAPINFQGGPLSYE 221
Query: 132 SGQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFR 191
S ++ + + ++VG+L P T A L F S+ R+ D RGF FV
Sbjct: 222 SVVQQTPAYNTTVYVGNLVPYCTQADLIPLFQSIGYLSEIRMQAD------RGFAFVKLD 275
Query: 192 NQQDAQSAINDLTGKWLGSRQIRCNW 217
+ A AI L G+ + R I+C+W
Sbjct: 276 THEHAAMAIVQLQGQMVHGRPIKCSW 301
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 107/242 (44%), Gaps = 44/242 (18%)
Query: 143 NIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGR-SRGFGFVSFRNQQDAQSAIN 201
+++VG+LSP VT+ L F+V +++ D+ +GFV + + + A++A+
Sbjct: 17 HLYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDRNYQHGGLNYGFVEYMDMRSAETALQ 76
Query: 202 DLTGKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQ 261
L G+ + +IR NWA +G N ED T+G
Sbjct: 77 TLNGRKIFDTEIRVNWAYQGQQNKED------------TSG------------------- 105
Query: 262 YTTVYVGNLAPEVTQLDLHRHFHSLG----AGVIEEVRVQRDKGFGFVRYSTHAEAALAI 317
+ V+VG+L+PEV L + F + G A V+ ++ + +G+GF+ + +A AI
Sbjct: 106 HYHVFVGDLSPEVNDDVLAKAFSAFGTLSDARVMWDMNSGKSRGYGFLAFRDKTDAEQAI 165
Query: 318 QMGNTTQSSYLFGKQMKCSWGSKPT---PPGTSSNPLPP--PAAAPIPGLSAADLLAYER 372
T +L + ++ +W ++ T P +P P AP P L+YE
Sbjct: 166 A---TMNGEWLGSRAIRVNWANQKTQGGAPAVQQSPRPAGSTGGAPAPINFQGGPLSYES 222
Query: 373 QI 374
+
Sbjct: 223 VV 224
Score = 45.8 bits (107), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 55/113 (48%), Gaps = 8/113 (7%)
Query: 53 PSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSSYGFIHYFDRRSAAMAIL 112
P+ +VYVGN+ T+ L +F S G + ++ + D+ + F+ AAMAI+
Sbjct: 228 PAYNTTVYVGNLVPYCTQADLIPLFQSIGYLSEIRM-QADR-GFAFVKLDTHEHAAMAIV 285
Query: 113 SLNGRHLFGQPIKVNWAYASGQREDTSGHFNIFVGDLSPEVTDATLFACFSVY 165
L G+ + G+PIK +W ++ G +SP T AT +A +Y
Sbjct: 286 QLQGQMVHGRPIKCSWG-----KDRADGTAAAQPAAMSPTTT-ATPYASMPMY 332
Score = 41.2 bits (95), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 42/89 (47%), Gaps = 12/89 (13%)
Query: 256 PENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDK-------GFGFVRYS 308
P P+ +YVGNL+P VT+ L F AG ++ V++ D+ +GFV Y
Sbjct: 9 PAEAPRRAHLYVGNLSPRVTEYMLTEIFAV--AGPVQHVKIIPDRNYQHGGLNYGFVEYM 66
Query: 309 THAEAALAIQMGNTTQSSYLFGKQMKCSW 337
A A+Q T +F +++ +W
Sbjct: 67 DMRSAETALQ---TLNGRKIFDTEIRVNW 92
>gi|426201609|gb|EKV51532.1| hypothetical protein AGABI2DRAFT_189771 [Agaricus bisporus var.
bisporus H97]
Length = 469
Score = 244 bits (624), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 131/291 (45%), Positives = 178/291 (61%), Gaps = 17/291 (5%)
Query: 59 VYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKS------SYGFIHYFDRRSAAMAIL 112
+YVGN+ +VTE +L E+F+ GPV+ K+I D++ +YGF+ Y D RSA A+
Sbjct: 18 LYVGNLSPRVTEYMLTEIFAVAGPVQHVKII-PDRNYQHGGLNYGFVEYMDMRSAETALQ 76
Query: 113 SLNGRHLFGQPIKVNWAYASGQ-REDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDA 171
+LNGR +F I+VNWAY Q +EDTSGH+++FVGDLSPEV D L FS + + SDA
Sbjct: 77 TLNGRKIFDTEIRVNWAYQGQQNKEDTSGHYHVFVGDLSPEVNDDVLAKAFSAFGTLSDA 136
Query: 172 RVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWA---TKGAGNNEDK 228
RVMWD +G+SRG+GF++FR++ DA+ AI + G+WLGSR IR NWA T+G +
Sbjct: 137 RVMWDMNSGKSRGYGFLAFRDKTDAEQAIATMNGEWLGSRAIRVNWANQKTQGGAPAVQQ 196
Query: 229 QSSDAKSVVELTNGSSEDGKETTNTEAPENNPQY-TTVYVGNLAPEVTQLDLHRHFHSLG 287
A S + G + + P Y TTVYVGNL P TQ DL F S+
Sbjct: 197 SPRPAGSTGGAPAPINFQGGPLSYESVVQQTPAYNTTVYVGNLVPYCTQADLIPLFQSI- 255
Query: 288 AGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWG 338
G + E+R+Q D+GF FV+ TH AA+AI Q + G+ +KCSWG
Sbjct: 256 -GYLSEIRMQADRGFAFVKLDTHEHAAMAIVQ---LQGQMVHGRPIKCSWG 302
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 107/242 (44%), Gaps = 44/242 (18%)
Query: 143 NIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGR-SRGFGFVSFRNQQDAQSAIN 201
+++VG+LSP VT+ L F+V +++ D+ +GFV + + + A++A+
Sbjct: 17 HLYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDRNYQHGGLNYGFVEYMDMRSAETALQ 76
Query: 202 DLTGKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQ 261
L G+ + +IR NWA +G N ED T+G
Sbjct: 77 TLNGRKIFDTEIRVNWAYQGQQNKED------------TSG------------------- 105
Query: 262 YTTVYVGNLAPEVTQLDLHRHFHSLG----AGVIEEVRVQRDKGFGFVRYSTHAEAALAI 317
+ V+VG+L+PEV L + F + G A V+ ++ + +G+GF+ + +A AI
Sbjct: 106 HYHVFVGDLSPEVNDDVLAKAFSAFGTLSDARVMWDMNSGKSRGYGFLAFRDKTDAEQAI 165
Query: 318 QMGNTTQSSYLFGKQMKCSWGSKPT---PPGTSSNPLPP--PAAAPIPGLSAADLLAYER 372
T +L + ++ +W ++ T P +P P AP P L+YE
Sbjct: 166 A---TMNGEWLGSRAIRVNWANQKTQGGAPAVQQSPRPAGSTGGAPAPINFQGGPLSYES 222
Query: 373 QI 374
+
Sbjct: 223 VV 224
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 86/206 (41%), Gaps = 46/206 (22%)
Query: 52 DPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKS----SYGFIHYFDRRSA 107
D S V+VG++ +V + +L + FS+ G + +++ S YGF+ + D+ A
Sbjct: 102 DTSGHYHVFVGDLSPEVNDDVLAKAFSAFGTLSDARVMWDMNSGKSRGYGFLAFRDKTDA 161
Query: 108 AMAILSLNGRHLFGQPIKVNWA------------------------------------YA 131
AI ++NG L + I+VNWA Y
Sbjct: 162 EQAIATMNGEWLGSRAIRVNWANQKTQGGAPAVQQSPRPAGSTGGAPAPINFQGGPLSYE 221
Query: 132 SGQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFR 191
S ++ + + ++VG+L P T A L F S+ R+ D RGF FV
Sbjct: 222 SVVQQTPAYNTTVYVGNLVPYCTQADLIPLFQSIGYLSEIRMQAD------RGFAFVKLD 275
Query: 192 NQQDAQSAINDLTGKWLGSRQIRCNW 217
+ A AI L G+ + R I+C+W
Sbjct: 276 THEHAAMAIVQLQGQMVHGRPIKCSW 301
Score = 45.1 bits (105), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 55/113 (48%), Gaps = 8/113 (7%)
Query: 53 PSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSSYGFIHYFDRRSAAMAIL 112
P+ +VYVGN+ T+ L +F S G + ++ + D+ + F+ AAMAI+
Sbjct: 228 PAYNTTVYVGNLVPYCTQADLIPLFQSIGYLSEIRM-QADR-GFAFVKLDTHEHAAMAIV 285
Query: 113 SLNGRHLFGQPIKVNWAYASGQREDTSGHFNIFVGDLSPEVTDATLFACFSVY 165
L G+ + G+PIK +W ++ G +SP T AT +A +Y
Sbjct: 286 QLQGQMVHGRPIKCSWG-----KDRADGTAAAQPAAMSPTTT-ATPYASMPMY 332
Score = 41.2 bits (95), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 42/89 (47%), Gaps = 12/89 (13%)
Query: 256 PENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDK-------GFGFVRYS 308
P P+ +YVGNL+P VT+ L F AG ++ V++ D+ +GFV Y
Sbjct: 9 PAEAPRRAHLYVGNLSPRVTEYMLTEIFAV--AGPVQHVKIIPDRNYQHGGLNYGFVEYM 66
Query: 309 THAEAALAIQMGNTTQSSYLFGKQMKCSW 337
A A+Q T +F +++ +W
Sbjct: 67 DMRSAETALQ---TLNGRKIFDTEIRVNW 92
>gi|170084123|ref|XP_001873285.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164650837|gb|EDR15077.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 422
Score = 244 bits (624), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 134/310 (43%), Positives = 186/310 (60%), Gaps = 20/310 (6%)
Query: 59 VYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKS------SYGFIHYFDRRSAAMAIL 112
+YVGN+ +VTE +L E+F+ GPV+ K+I D++ +YGF+ Y D R+A A+
Sbjct: 13 LYVGNLSPRVTEYMLTEIFAVAGPVQHVKII-PDRNYQHGGLNYGFVEYMDMRAAETALQ 71
Query: 113 SLNGRHLFGQPIKVNWAYASGQ-REDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDA 171
+LNGR +F I+VNWAY Q +EDT+GH+++FVGDLSPEV D L FS + + SDA
Sbjct: 72 TLNGRKIFDTEIRVNWAYQGQQNKEDTTGHYHVFVGDLSPEVNDEVLAKAFSAFGTMSDA 131
Query: 172 RVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT-KGAGNNEDKQS 230
RVMWD +G+SRG+GF++FR++ DA+ AI + G+WLGSR IR NWA K G +
Sbjct: 132 RVMWDMNSGKSRGYGFLAFRDKTDAEQAIATMNGEWLGSRAIRVNWANQKTQGAPPTTTA 191
Query: 231 SDAKSVVELTNGSSE-----DGKETTNTEAPENNPQY-TTVYVGNLAPEVTQLDLHRHFH 284
S + +T GS+ G + + P Y +TVYVGNL P TQ DL F
Sbjct: 192 SSPRPGGAVTTGSAPAPINFQGGPLSYESVVQQTPAYNSTVYVGNLVPYCTQADLIPLFQ 251
Query: 285 SLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSKPTPP 344
S+ G + E+R+Q D+GF FV+ TH AA+AI Q + G+ +KCSWG
Sbjct: 252 SI--GYLSEIRMQADRGFAFVKLDTHEHAAMAIVQ---LQGQMVHGRPIKCSWGKDRADG 306
Query: 345 GTSSNPLPPP 354
GT+ P P
Sbjct: 307 GTAQPGGPSP 316
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 111/245 (45%), Gaps = 47/245 (19%)
Query: 143 NIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGR-SRGFGFVSFRNQQDAQSAIN 201
+++VG+LSP VT+ L F+V +++ D+ +GFV + + + A++A+
Sbjct: 12 HLYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDRNYQHGGLNYGFVEYMDMRAAETALQ 71
Query: 202 DLTGKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQ 261
L G+ + +IR NWA +G N ED T G
Sbjct: 72 TLNGRKIFDTEIRVNWAYQGQQNKED------------TTG------------------- 100
Query: 262 YTTVYVGNLAPEVTQLDLHRHFHSLG----AGVIEEVRVQRDKGFGFVRYSTHAEAALAI 317
+ V+VG+L+PEV L + F + G A V+ ++ + +G+GF+ + +A AI
Sbjct: 101 HYHVFVGDLSPEVNDEVLAKAFSAFGTMSDARVMWDMNSGKSRGYGFLAFRDKTDAEQAI 160
Query: 318 QMGNTTQSSYLFGKQMKCSWGSKPT----PPGTSSNPLPPPA----AAPIPGLSAADLLA 369
T +L + ++ +W ++ T P T+S+P P A +AP P L+
Sbjct: 161 A---TMNGEWLGSRAIRVNWANQKTQGAPPTTTASSPRPGGAVTTGSAPAPINFQGGPLS 217
Query: 370 YERQI 374
YE +
Sbjct: 218 YESVV 222
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 40/77 (51%), Gaps = 2/77 (2%)
Query: 53 PSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSSYGFIHYFDRRSAAMAIL 112
P+ +VYVGN+ T+ L +F S G + ++ + + F+ AAMAI+
Sbjct: 226 PAYNSTVYVGNLVPYCTQADLIPLFQSIGYLSEIRM--QADRGFAFVKLDTHEHAAMAIV 283
Query: 113 SLNGRHLFGQPIKVNWA 129
L G+ + G+PIK +W
Sbjct: 284 QLQGQMVHGRPIKCSWG 300
>gi|401887565|gb|EJT51549.1| non-translatable mRNA -binding protein [Trichosporon asahii var.
asahii CBS 2479]
gi|406699766|gb|EKD02963.1| non-translatable mRNA -binding protein [Trichosporon asahii var.
asahii CBS 8904]
Length = 381
Score = 244 bits (624), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 132/287 (45%), Positives = 180/287 (62%), Gaps = 22/287 (7%)
Query: 59 VYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKS------SYGFIHYFDRRSAAMAIL 112
+Y+GN+ +VT+ +L E+FS GPV K+I +D++ +YGF+ Y D RSA A+
Sbjct: 15 LYIGNMSPRVTDQMLAEIFSVAGPVVSAKII-QDRNFHHGGYNYGFVEYTDMRSAEQALT 73
Query: 113 SLNGRHLFGQPIKVNWAY-ASGQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDA 171
+LNGR +F I+VNWAY G REDT HF++FVGDLSPEV D L F+ + S S+A
Sbjct: 74 TLNGRKIFDSEIRVNWAYQGQGNREDTQHHFHVFVGDLSPEVNDDILGKAFAKFASLSEA 133
Query: 172 RVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSS 231
RVMWD +G+SRG+GF+SFR++ DA+ AI + G+WLGSR IR NWA N+ Q+
Sbjct: 134 RVMWDMNSGKSRGYGFLSFRDKADAEQAIATMNGEWLGSRAIRVNWA------NQKTQTG 187
Query: 232 DAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVI 291
++S L G +G T A + TTVYVGNL P TQ DL F + G I
Sbjct: 188 GSRS---LGLGQGFNGPLTFEQVAAQTPDYNTTVYVGNLIPYTTQADLIPLFQNY--GYI 242
Query: 292 EEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWG 338
E+R+Q D+GF FV+ THA AAL+I + Q+ + G+ +KCSWG
Sbjct: 243 VEIRMQADRGFAFVKLDTHANAALSI---TSLQNQLVHGRPIKCSWG 286
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 95/212 (44%), Gaps = 43/212 (20%)
Query: 143 NIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGR-SRGFGFVSFRNQQDAQSAIN 201
++++G++SP VTD L FSV A+++ D+ +GFV + + + A+ A+
Sbjct: 14 HLYIGNMSPRVTDQMLAEIFSVAGPVVSAKIIQDRNFHHGGYNYGFVEYTDMRSAEQALT 73
Query: 202 DLTGKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQ 261
L G+ + +IR NWA +G GN ED Q
Sbjct: 74 TLNGRKIFDSEIRVNWAYQGQGNREDTQ-------------------------------H 102
Query: 262 YTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRD------KGFGFVRYSTHAEAAL 315
+ V+VG+L+PEV L + F + + E RV D +G+GF+ + A+A
Sbjct: 103 HFHVFVGDLSPEVNDDILGKAFAKFAS--LSEARVMWDMNSGKSRGYGFLSFRDKADAEQ 160
Query: 316 AIQMGNTTQSSYLFGKQMKCSWGSKPTPPGTS 347
AI T +L + ++ +W ++ T G S
Sbjct: 161 AIA---TMNGEWLGSRAIRVNWANQKTQTGGS 189
>gi|336389833|gb|EGO30976.1| hypothetical protein SERLADRAFT_455426 [Serpula lacrymans var.
lacrymans S7.9]
Length = 439
Score = 243 bits (621), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 139/319 (43%), Positives = 192/319 (60%), Gaps = 32/319 (10%)
Query: 59 VYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKS------SYGFIHYFDRRSAAMAIL 112
+YVGN+ +VTE +L E+F+ GPV+ K+I D++ +YGF+ Y D R+A A+
Sbjct: 19 LYVGNLSPRVTEYMLTEIFAVAGPVQHVKII-PDRNYQHGGLNYGFVEYMDMRAAETALQ 77
Query: 113 SLNGRHLFGQPIKVNWAYASGQ-REDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDA 171
+LNGR +F I+VNWAY Q +EDT+GH+++FVGDLSPEV D L FS + + SDA
Sbjct: 78 TLNGRKIFDTEIRVNWAYQGQQNKEDTTGHYHVFVGDLSPEVNDEILGKAFSAFGTMSDA 137
Query: 172 RVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSS 231
RVMWD +G+SRG+GF++FR++ DA+ AI + G+WLGSR IR NWA N+ Q S
Sbjct: 138 RVMWDMNSGKSRGYGFLAFRDKTDAEQAIATMNGEWLGSRAIRVNWA------NQKTQGS 191
Query: 232 DAKSVVE---LTNGSSE----DGKETTNTEAPENNPQY-TTVYVGNLAPEVTQLDLHRHF 283
A + T G+ G + + P Y +TVYVGNL P TQ DL F
Sbjct: 192 VAVASPPRPGATGGAPAPINFQGGPLSYDSVVQQTPSYNSTVYVGNLVPYCTQADLIPLF 251
Query: 284 HSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSKPTP 343
S+ G + E+R+Q D+GF FV+ TH AA+AI Q + G+ +KCSWG K
Sbjct: 252 QSI--GYLSEIRMQADRGFAFVKLDTHEHAAMAIVQ---LQGQMVHGRPIKCSWG-KDRA 305
Query: 344 PGTSSNP----LPPPAAAP 358
GT++ P P PA+AP
Sbjct: 306 DGTTAQPGGPLSPTPASAP 324
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 103/228 (45%), Gaps = 46/228 (20%)
Query: 143 NIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGR-SRGFGFVSFRNQQDAQSAIN 201
+++VG+LSP VT+ L F+V +++ D+ +GFV + + + A++A+
Sbjct: 18 HLYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDRNYQHGGLNYGFVEYMDMRAAETALQ 77
Query: 202 DLTGKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQ 261
L G+ + +IR NWA +G N ED T G
Sbjct: 78 TLNGRKIFDTEIRVNWAYQGQQNKED------------TTG------------------- 106
Query: 262 YTTVYVGNLAPEVTQLDLHRHFHSLG----AGVIEEVRVQRDKGFGFV--RYSTHAEAAL 315
+ V+VG+L+PEV L + F + G A V+ ++ + +G+GF+ R T AE A+
Sbjct: 107 HYHVFVGDLSPEVNDEILGKAFSAFGTMSDARVMWDMNSGKSRGYGFLAFRDKTDAEQAI 166
Query: 316 AIQMGNTTQSSYLFGKQMKCSWGSKPTPPGTSSNPLPPPAA---APIP 360
A T +L + ++ +W ++ T + P P A AP P
Sbjct: 167 A-----TMNGEWLGSRAIRVNWANQKTQGSVAVASPPRPGATGGAPAP 209
Score = 45.4 bits (106), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 42/77 (54%), Gaps = 2/77 (2%)
Query: 53 PSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSSYGFIHYFDRRSAAMAIL 112
PS +VYVGN+ T+ L +F S G + ++ + D+ + F+ AAMAI+
Sbjct: 227 PSYNSTVYVGNLVPYCTQADLIPLFQSIGYLSEIRM-QADR-GFAFVKLDTHEHAAMAIV 284
Query: 113 SLNGRHLFGQPIKVNWA 129
L G+ + G+PIK +W
Sbjct: 285 QLQGQMVHGRPIKCSWG 301
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 42/90 (46%), Gaps = 12/90 (13%)
Query: 255 APENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDK-------GFGFVRY 307
P P+ +YVGNL+P VT+ L F AG ++ V++ D+ +GFV Y
Sbjct: 9 GPAEAPRRAHLYVGNLSPRVTEYMLTEIFAV--AGPVQHVKIIPDRNYQHGGLNYGFVEY 66
Query: 308 STHAEAALAIQMGNTTQSSYLFGKQMKCSW 337
A A+Q T +F +++ +W
Sbjct: 67 MDMRAAETALQ---TLNGRKIFDTEIRVNW 93
>gi|403416100|emb|CCM02800.1| predicted protein [Fibroporia radiculosa]
Length = 433
Score = 243 bits (620), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 136/318 (42%), Positives = 190/318 (59%), Gaps = 30/318 (9%)
Query: 59 VYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKS------SYGFIHYFDRRSAAMAIL 112
+YVGN+ +VTE +L E+F+ GPV+ K+I D++ +YGF+ Y D R+A A+
Sbjct: 18 LYVGNLSPRVTEYMLTEIFAVAGPVQHVKII-PDRNYQHGGLNYGFVEYMDMRAAETALQ 76
Query: 113 SLNGRHLFGQPIKVNWAYASGQ-REDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDA 171
+LNGR +F I+VNWAY Q +EDTS H+++FVGDLSPEV D L FS + + SDA
Sbjct: 77 TLNGRKIFDTEIRVNWAYQGQQNKEDTSNHYHVFVGDLSPEVNDEVLGKAFSAFGTLSDA 136
Query: 172 RVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSS 231
RVMWD +G+SRG+GF++FR++ DA+ AI + G+WLGSR IR NWA N+ Q
Sbjct: 137 RVMWDMNSGKSRGYGFLAFRDKTDAEQAIATMNGEWLGSRAIRVNWA------NQKTQGG 190
Query: 232 DAKSVVELTNGSSE-------DGKETTNTEAPENNPQY-TTVYVGNLAPEVTQLDLHRHF 283
+ ++ +G G + + P Y TTVYVGNL P TQ DL F
Sbjct: 191 PSPTMPGRPSGMGGAPAPINFQGGPLSYESVVQQTPAYNTTVYVGNLVPYCTQADLIPLF 250
Query: 284 HSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWG---SK 340
S+ G + E+R+Q D+GF FV+ TH AA+AI Q + G+ +KCSWG +
Sbjct: 251 QSI--GYLSEIRMQADRGFAFVKLDTHEHAAMAIVQ---LQGQMVHGRPIKCSWGKDRAD 305
Query: 341 PTPPGTSSNPLPPPAAAP 358
T P ++ + P PAAAP
Sbjct: 306 GTAPLSTGSMSPTPAAAP 323
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 106/244 (43%), Gaps = 50/244 (20%)
Query: 143 NIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGR-SRGFGFVSFRNQQDAQSAIN 201
+++VG+LSP VT+ L F+V +++ D+ +GFV + + + A++A+
Sbjct: 17 HLYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDRNYQHGGLNYGFVEYMDMRAAETALQ 76
Query: 202 DLTGKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQ 261
L G+ + +IR NWA +G N ED T+N
Sbjct: 77 TLNGRKIFDTEIRVNWAYQGQQNKED----------------------TSN--------- 105
Query: 262 YTTVYVGNLAPEVTQLDLHRHFHSLG----AGVIEEVRVQRDKGFGFVRYSTHAEAALAI 317
+ V+VG+L+PEV L + F + G A V+ ++ + +G+GF+ + +A AI
Sbjct: 106 HYHVFVGDLSPEVNDEVLGKAFSAFGTLSDARVMWDMNSGKSRGYGFLAFRDKTDAEQAI 165
Query: 318 QMGNTTQSSYLFGKQMKCSW-------GSKPTPPGTSSNPLPPPAAAPIPGLSAADLLAY 370
T +L + ++ +W G PT PG S AP P L+Y
Sbjct: 166 A---TMNGEWLGSRAIRVNWANQKTQGGPSPTMPGRPSG----MGGAPAPINFQGGPLSY 218
Query: 371 ERQI 374
E +
Sbjct: 219 ESVV 222
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 86/205 (41%), Gaps = 44/205 (21%)
Query: 52 DPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKS----SYGFIHYFDRRSA 107
D S V+VG++ +V + +L + FS+ G + +++ S YGF+ + D+ A
Sbjct: 102 DTSNHYHVFVGDLSPEVNDEVLGKAFSAFGTLSDARVMWDMNSGKSRGYGFLAFRDKTDA 161
Query: 108 AMAILSLNGRHLFGQPIKVNWA----------------------------------YASG 133
AI ++NG L + I+VNWA Y S
Sbjct: 162 EQAIATMNGEWLGSRAIRVNWANQKTQGGPSPTMPGRPSGMGGAPAPINFQGGPLSYESV 221
Query: 134 QREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQ 193
++ + + ++VG+L P T A L F S+ R+ D RGF FV
Sbjct: 222 VQQTPAYNTTVYVGNLVPYCTQADLIPLFQSIGYLSEIRMQAD------RGFAFVKLDTH 275
Query: 194 QDAQSAINDLTGKWLGSRQIRCNWA 218
+ A AI L G+ + R I+C+W
Sbjct: 276 EHAAMAIVQLQGQMVHGRPIKCSWG 300
Score = 45.4 bits (106), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 48/99 (48%), Gaps = 7/99 (7%)
Query: 53 PSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSSYGFIHYFDRRSAAMAIL 112
P+ +VYVGN+ T+ L +F S G + ++ + + F+ AAMAI+
Sbjct: 226 PAYNTTVYVGNLVPYCTQADLIPLFQSIGYLSEIRM--QADRGFAFVKLDTHEHAAMAIV 283
Query: 113 SLNGRHLFGQPIKVNWAYASGQREDTSGHFNIFVGDLSP 151
L G+ + G+PIK +W ++ G + G +SP
Sbjct: 284 QLQGQMVHGRPIKCSWG-----KDRADGTAPLSTGSMSP 317
>gi|331230317|ref|XP_003327823.1| hypothetical protein PGTG_08590 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|403168138|ref|XP_003889766.1| hypothetical protein, variant 2 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|403168140|ref|XP_003889767.1| hypothetical protein, variant 1 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309306813|gb|EFP83404.1| hypothetical protein PGTG_08590 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375167366|gb|EHS63397.1| hypothetical protein, variant 2 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375167367|gb|EHS63398.1| hypothetical protein, variant 1 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 471
Score = 242 bits (617), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 138/319 (43%), Positives = 190/319 (59%), Gaps = 25/319 (7%)
Query: 59 VYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKS------SYGFIHYFDRRSAAMAIL 112
+YVGN+ +VTE +LQE+FS GPV+G K+I D++ +YGF+ Y++ RSA A+
Sbjct: 111 LYVGNLSPRVTEYMLQEIFSVAGPVQGVKII-PDRNFQHGGLNYGFVEYYEMRSAETALQ 169
Query: 113 SLNGRHLFGQPIKVNWAYASGQ---REDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCS 169
+L GR +F I+VNWAY + Q +ED S H+++FVGDLSPEV D L F+ + S S
Sbjct: 170 TLGGRKIFDTEIRVNWAYQNSQSNVKEDLSTHYHVFVGDLSPEVNDEVLAKAFAAFGSLS 229
Query: 170 DARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQ 229
DARVMWD +G+SRG+GF++FR++ DA+ AI + G+WLGSR IR NWA +
Sbjct: 230 DARVMWDMNSGKSRGYGFLAFRDKTDAEQAIATMNGEWLGSRAIRVNWANQ----KNQGM 285
Query: 230 SSDAKSVVELTNGS----SEDGKETTNTEA-PENNPQY-TTVYVGNLAPEVTQLDLHRHF 283
++ +V+ GS TN EA + P Y TTVY GNL P TQ DL F
Sbjct: 286 AATPGAVIAPGMGSGGMNRGGFGGATNYEAVVQQAPAYNTTVYTGNLVPYSTQADLIPLF 345
Query: 284 HSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSKPTP 343
G G I E+R+Q D+GF FV+ TH AA+AI N T + + G+ +KCSWG
Sbjct: 346 Q--GFGYIVEIRMQADRGFAFVKMDTHENAAMAIV--NLTGTP-VHGRPLKCSWGKDRAS 400
Query: 344 PGTSSNPLPPPAAAPIPGL 362
+S P AP+ G+
Sbjct: 401 ADPNSAPASGMPMAPVAGM 419
>gi|336376899|gb|EGO05234.1| hypothetical protein SERLA73DRAFT_44756 [Serpula lacrymans var.
lacrymans S7.3]
Length = 523
Score = 241 bits (615), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 139/319 (43%), Positives = 192/319 (60%), Gaps = 32/319 (10%)
Query: 59 VYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKS------SYGFIHYFDRRSAAMAIL 112
+YVGN+ +VTE +L E+F+ GPV+ K+I D++ +YGF+ Y D R+A A+
Sbjct: 16 LYVGNLSPRVTEYMLTEIFAVAGPVQHVKII-PDRNYQHGGLNYGFVEYMDMRAAETALQ 74
Query: 113 SLNGRHLFGQPIKVNWAYASGQ-REDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDA 171
+LNGR +F I+VNWAY Q +EDT+GH+++FVGDLSPEV D L FS + + SDA
Sbjct: 75 TLNGRKIFDTEIRVNWAYQGQQNKEDTTGHYHVFVGDLSPEVNDEILGKAFSAFGTMSDA 134
Query: 172 RVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSS 231
RVMWD +G+SRG+GF++FR++ DA+ AI + G+WLGSR IR NWA N+ Q S
Sbjct: 135 RVMWDMNSGKSRGYGFLAFRDKTDAEQAIATMNGEWLGSRAIRVNWA------NQKTQGS 188
Query: 232 DAKSVVE---LTNGSSE----DGKETTNTEAPENNPQY-TTVYVGNLAPEVTQLDLHRHF 283
A + T G+ G + + P Y +TVYVGNL P TQ DL F
Sbjct: 189 VAVASPPRPGATGGAPAPINFQGGPLSYDSVVQQTPSYNSTVYVGNLVPYCTQADLIPLF 248
Query: 284 HSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSKPTP 343
S+ G + E+R+Q D+GF FV+ TH AA+AI Q + G+ +KCSWG K
Sbjct: 249 QSI--GYLSEIRMQADRGFAFVKLDTHEHAAMAIVQ---LQGQMVHGRPIKCSWG-KDRA 302
Query: 344 PGTSSNP----LPPPAAAP 358
GT++ P P PA+AP
Sbjct: 303 DGTTAQPGGPLSPTPASAP 321
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 101/226 (44%), Gaps = 42/226 (18%)
Query: 143 NIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGR-SRGFGFVSFRNQQDAQSAIN 201
+++VG+LSP VT+ L F+V +++ D+ +GFV + + + A++A+
Sbjct: 15 HLYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDRNYQHGGLNYGFVEYMDMRAAETALQ 74
Query: 202 DLTGKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQ 261
L G+ + +IR NWA +G N ED T G
Sbjct: 75 TLNGRKIFDTEIRVNWAYQGQQNKED------------TTG------------------- 103
Query: 262 YTTVYVGNLAPEVTQLDLHRHFHSLG----AGVIEEVRVQRDKGFGFVRYSTHAEAALAI 317
+ V+VG+L+PEV L + F + G A V+ ++ + +G+GF+ + +A AI
Sbjct: 104 HYHVFVGDLSPEVNDEILGKAFSAFGTMSDARVMWDMNSGKSRGYGFLAFRDKTDAEQAI 163
Query: 318 QMGNTTQSSYLFGKQMKCSWGSKPTPPGTSSNPLPPPAA---APIP 360
T +L + ++ +W ++ T + P P A AP P
Sbjct: 164 A---TMNGEWLGSRAIRVNWANQKTQGSVAVASPPRPGATGGAPAP 206
Score = 44.7 bits (104), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 40/76 (52%), Gaps = 2/76 (2%)
Query: 53 PSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSSYGFIHYFDRRSAAMAIL 112
PS +VYVGN+ T+ L +F S G + ++ + + F+ AAMAI+
Sbjct: 224 PSYNSTVYVGNLVPYCTQADLIPLFQSIGYLSEIRM--QADRGFAFVKLDTHEHAAMAIV 281
Query: 113 SLNGRHLFGQPIKVNW 128
L G+ + G+PIK +W
Sbjct: 282 QLQGQMVHGRPIKCSW 297
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 42/89 (47%), Gaps = 12/89 (13%)
Query: 256 PENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDK-------GFGFVRYS 308
P P+ +YVGNL+P VT+ L F AG ++ V++ D+ +GFV Y
Sbjct: 7 PAEAPRRAHLYVGNLSPRVTEYMLTEIFAV--AGPVQHVKIIPDRNYQHGGLNYGFVEYM 64
Query: 309 THAEAALAIQMGNTTQSSYLFGKQMKCSW 337
A A+Q T +F +++ +W
Sbjct: 65 DMRAAETALQ---TLNGRKIFDTEIRVNW 90
>gi|409051430|gb|EKM60906.1| hypothetical protein PHACADRAFT_247129 [Phanerochaete carnosa
HHB-10118-sp]
Length = 425
Score = 241 bits (615), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 135/317 (42%), Positives = 187/317 (58%), Gaps = 23/317 (7%)
Query: 59 VYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKS------SYGFIHYFDRRSAAMAIL 112
+YVGN+ +VTE +L E+F+ GPV+ K+I D++ +YGF+ Y D R+A A+
Sbjct: 15 LYVGNLSPRVTEYMLTEIFAVAGPVQHVKII-PDRNYQHGGLNYGFVEYMDMRAAETALQ 73
Query: 113 SLNGRHLFGQPIKVNWAYASGQ-REDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDA 171
+LNGR +F I+VNWAY Q +EDT+GH+++FVGDLSPEV D L F+ + + SDA
Sbjct: 74 TLNGRKIFDTEIRVNWAYQGQQNKEDTTGHYHVFVGDLSPEVNDEVLAKAFAAFGTLSDA 133
Query: 172 RVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWA---TKGAGNNEDK 228
RVMWD +G+SRG+GF++FR++ DA+ AI + G+WLGSR IR NWA T+GA
Sbjct: 134 RVMWDMNSGKSRGYGFLAFRDKTDAEQAIATMNGEWLGSRAIRVNWANQKTQGAPPPRAG 193
Query: 229 QSSDAKSVVELTNGSSE----DGKETTNTEAPENNPQY-TTVYVGNLAPEVTQLDLHRHF 283
+ G+ G + + P Y +TVYVGNL P TQ DL F
Sbjct: 194 NGGNGSDGGHGGGGAPAPMNFQGGPLSYESVVQQTPAYNSTVYVGNLVPYATQADLIPLF 253
Query: 284 HSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSKPTP 343
S+ G + E+R+Q D+GF FV+ TH AA+AI Q + G+ +KCSWG
Sbjct: 254 QSI--GYLSEIRMQADRGFAFVKLDTHEHAAMAIVQ---LQGQMVHGRPIKCSWGKDRAD 308
Query: 344 PG--TSSNPLPPPAAAP 358
G T+ P PAAAP
Sbjct: 309 GGALTTGGMSPTPAAAP 325
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 94/205 (45%), Gaps = 39/205 (19%)
Query: 143 NIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGR-SRGFGFVSFRNQQDAQSAIN 201
+++VG+LSP VT+ L F+V +++ D+ +GFV + + + A++A+
Sbjct: 14 HLYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDRNYQHGGLNYGFVEYMDMRAAETALQ 73
Query: 202 DLTGKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQ 261
L G+ + +IR NWA +G N ED T G
Sbjct: 74 TLNGRKIFDTEIRVNWAYQGQQNKED------------TTG------------------- 102
Query: 262 YTTVYVGNLAPEVTQLDLHRHFHSLG----AGVIEEVRVQRDKGFGFVRYSTHAEAALAI 317
+ V+VG+L+PEV L + F + G A V+ ++ + +G+GF+ + +A AI
Sbjct: 103 HYHVFVGDLSPEVNDEVLAKAFAAFGTLSDARVMWDMNSGKSRGYGFLAFRDKTDAEQAI 162
Query: 318 QMGNTTQSSYLFGKQMKCSWGSKPT 342
T +L + ++ +W ++ T
Sbjct: 163 A---TMNGEWLGSRAIRVNWANQKT 184
Score = 44.7 bits (104), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 40/76 (52%), Gaps = 2/76 (2%)
Query: 53 PSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSSYGFIHYFDRRSAAMAIL 112
P+ +VYVGN+ T+ L +F S G + ++ + + F+ AAMAI+
Sbjct: 229 PAYNSTVYVGNLVPYATQADLIPLFQSIGYLSEIRM--QADRGFAFVKLDTHEHAAMAIV 286
Query: 113 SLNGRHLFGQPIKVNW 128
L G+ + G+PIK +W
Sbjct: 287 QLQGQMVHGRPIKCSW 302
Score = 41.2 bits (95), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 43/90 (47%), Gaps = 12/90 (13%)
Query: 255 APENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDK-------GFGFVRY 307
+P P+ +YVGNL+P VT+ L F AG ++ V++ D+ +GFV Y
Sbjct: 5 SPAEAPRRAHLYVGNLSPRVTEYMLTEIFAV--AGPVQHVKIIPDRNYQHGGLNYGFVEY 62
Query: 308 STHAEAALAIQMGNTTQSSYLFGKQMKCSW 337
A A+Q T +F +++ +W
Sbjct: 63 MDMRAAETALQ---TLNGRKIFDTEIRVNW 89
>gi|299755830|ref|XP_001828914.2| polyadenylate-binding protein [Coprinopsis cinerea okayama7#130]
gi|298411401|gb|EAU92921.2| polyadenylate-binding protein [Coprinopsis cinerea okayama7#130]
Length = 433
Score = 241 bits (614), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 129/294 (43%), Positives = 175/294 (59%), Gaps = 26/294 (8%)
Query: 59 VYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKS------SYGFIHYFDRRSAAMAIL 112
+YVGN+ +VTE +L E+F+ GPV+ K+I D++ +YGF+ Y D R+A A+
Sbjct: 18 LYVGNLSPRVTEYMLTEIFAVAGPVQHVKII-PDRNYQHGGLNYGFVEYMDMRAAETALQ 76
Query: 113 SLNGRHLFGQPIKVNWAYASGQ-REDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDA 171
+LNGR +F I+VNWAY Q +EDTSGH+++FVGDLSPEV D L FS + + SDA
Sbjct: 77 TLNGRKIFDTEIRVNWAYQGQQNKEDTSGHYHVFVGDLSPEVNDEVLGKAFSAFGTLSDA 136
Query: 172 RVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSS 231
RVMWD +G+SRG+GF++FR++ DA+ AI + G+WLGSR IR NWA N+ Q
Sbjct: 137 RVMWDMNSGKSRGYGFLAFRDKTDAEQAIATMNGEWLGSRAIRVNWA------NQKTQGG 190
Query: 232 DAKSVVELTNGSS-------EDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFH 284
+ G + G T + P TTVYVGNL P TQ DL F
Sbjct: 191 APGGGARPSAGGGAPAPVNFQGGPLTYEQVLAQTAPYNTTVYVGNLVPYTTQADLIPLFQ 250
Query: 285 SLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWG 338
S+G + E+R+Q D+GF FV+ TH AA AI Q + G+ +KCSWG
Sbjct: 251 SIG--YLSEIRMQADRGFAFVKLDTHEHAAQAIVQ---LQGQMVHGRPIKCSWG 299
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 97/207 (46%), Gaps = 43/207 (20%)
Query: 143 NIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGR-SRGFGFVSFRNQQDAQSAIN 201
+++VG+LSP VT+ L F+V +++ D+ +GFV + + + A++A+
Sbjct: 17 HLYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDRNYQHGGLNYGFVEYMDMRAAETALQ 76
Query: 202 DLTGKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQ 261
L G+ + +IR NWA +G N ED T+G
Sbjct: 77 TLNGRKIFDTEIRVNWAYQGQQNKED------------TSG------------------- 105
Query: 262 YTTVYVGNLAPEVTQLDLHRHFHSLG----AGVIEEVRVQRDKGFGFV--RYSTHAEAAL 315
+ V+VG+L+PEV L + F + G A V+ ++ + +G+GF+ R T AE A+
Sbjct: 106 HYHVFVGDLSPEVNDEVLGKAFSAFGTLSDARVMWDMNSGKSRGYGFLAFRDKTDAEQAI 165
Query: 316 AIQMGNTTQSSYLFGKQMKCSWGSKPT 342
A T +L + ++ +W ++ T
Sbjct: 166 A-----TMNGEWLGSRAIRVNWANQKT 187
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 83/204 (40%), Gaps = 43/204 (21%)
Query: 52 DPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKS----SYGFIHYFDRRSA 107
D S V+VG++ +V + +L + FS+ G + +++ S YGF+ + D+ A
Sbjct: 102 DTSGHYHVFVGDLSPEVNDEVLGKAFSAFGTLSDARVMWDMNSGKSRGYGFLAFRDKTDA 161
Query: 108 AMAILSLNGRHLFGQPIKVNWA---------------------------------YASGQ 134
AI ++NG L + I+VNWA Y
Sbjct: 162 EQAIATMNGEWLGSRAIRVNWANQKTQGGAPGGGARPSAGGGAPAPVNFQGGPLTYEQVL 221
Query: 135 REDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQ 194
+ + ++VG+L P T A L F S+ R+ D RGF FV +
Sbjct: 222 AQTAPYNTTVYVGNLVPYTTQADLIPLFQSIGYLSEIRMQAD------RGFAFVKLDTHE 275
Query: 195 DAQSAINDLTGKWLGSRQIRCNWA 218
A AI L G+ + R I+C+W
Sbjct: 276 HAAQAIVQLQGQMVHGRPIKCSWG 299
>gi|449550716|gb|EMD41680.1| hypothetical protein CERSUDRAFT_110250 [Ceriporiopsis subvermispora
B]
Length = 448
Score = 241 bits (614), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 137/315 (43%), Positives = 187/315 (59%), Gaps = 22/315 (6%)
Query: 59 VYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKS------SYGFIHYFDRRSAAMAIL 112
+YVGN+ +VTE +L E+F+ GPV+ K+I D++ +YGF+ Y D R+A A+
Sbjct: 16 LYVGNLSPRVTEYMLTEIFAVAGPVQHVKII-PDRNYQHGGLNYGFVEYMDMRAAETALQ 74
Query: 113 SLNGRHLFGQPIKVNWAYASGQ-REDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDA 171
+LNGR +F I+VNWAY Q +EDTS HF++FVGDLSPEV D L FS + + SDA
Sbjct: 75 TLNGRKIFDTEIRVNWAYQGQQNKEDTSNHFHVFVGDLSPEVNDEVLAKAFSAFGTLSDA 134
Query: 172 RVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWA---TKGA---GNN 225
RVMWD +G+SRG+GF++FR++ DA+ AI + G+WLGSR IR NWA T+GA G
Sbjct: 135 RVMWDMNSGKSRGYGFLAFRDKTDAEQAIATMNGEWLGSRAIRVNWANQKTQGAPPVGVR 194
Query: 226 EDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQY-TTVYVGNLAPEVTQLDLHRHFH 284
S+ + + G + + P Y TTVYVGNL P TQ DL F
Sbjct: 195 SGSMSAGSGGGGGAPAPMNFSGGPLSYESVVQQTPAYNTTVYVGNLVPYCTQADLIPLFQ 254
Query: 285 SLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSKPTPP 344
S+ G + E+R+Q D+GF FV+ TH AA+AI Q + G+ +KCSWG
Sbjct: 255 SI--GYLSEIRMQADRGFAFVKLDTHEHAAMAIVQ---LQGQMVHGRPIKCSWGKDRADG 309
Query: 345 GTS--SNPLPPPAAA 357
G + + L P AAA
Sbjct: 310 GVALPAGSLSPTAAA 324
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 95/205 (46%), Gaps = 39/205 (19%)
Query: 143 NIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGR-SRGFGFVSFRNQQDAQSAIN 201
+++VG+LSP VT+ L F+V +++ D+ +GFV + + + A++A+
Sbjct: 15 HLYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDRNYQHGGLNYGFVEYMDMRAAETALQ 74
Query: 202 DLTGKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQ 261
L G+ + +IR NWA +G N ED T+N
Sbjct: 75 TLNGRKIFDTEIRVNWAYQGQQNKED----------------------TSN--------- 103
Query: 262 YTTVYVGNLAPEVTQLDLHRHFHSLG----AGVIEEVRVQRDKGFGFVRYSTHAEAALAI 317
+ V+VG+L+PEV L + F + G A V+ ++ + +G+GF+ + +A AI
Sbjct: 104 HFHVFVGDLSPEVNDEVLAKAFSAFGTLSDARVMWDMNSGKSRGYGFLAFRDKTDAEQAI 163
Query: 318 QMGNTTQSSYLFGKQMKCSWGSKPT 342
T +L + ++ +W ++ T
Sbjct: 164 A---TMNGEWLGSRAIRVNWANQKT 185
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 86/209 (41%), Gaps = 49/209 (23%)
Query: 52 DPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKS----SYGFIHYFDRRSA 107
D S V+VG++ +V + +L + FS+ G + +++ S YGF+ + D+ A
Sbjct: 100 DTSNHFHVFVGDLSPEVNDEVLAKAFSAFGTLSDARVMWDMNSGKSRGYGFLAFRDKTDA 159
Query: 108 AMAILSLNGRHLFGQPIKVNWA-------------------------------------- 129
AI ++NG L + I+VNWA
Sbjct: 160 EQAIATMNGEWLGSRAIRVNWANQKTQGAPPVGVRSGSMSAGSGGGGGAPAPMNFSGGPL 219
Query: 130 -YASGQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFV 188
Y S ++ + + ++VG+L P T A L F S+ R+ D RGF FV
Sbjct: 220 SYESVVQQTPAYNTTVYVGNLVPYCTQADLIPLFQSIGYLSEIRMQAD------RGFAFV 273
Query: 189 SFRNQQDAQSAINDLTGKWLGSRQIRCNW 217
+ A AI L G+ + R I+C+W
Sbjct: 274 KLDTHEHAAMAIVQLQGQMVHGRPIKCSW 302
Score = 46.2 bits (108), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 48/99 (48%), Gaps = 7/99 (7%)
Query: 53 PSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSSYGFIHYFDRRSAAMAIL 112
P+ +VYVGN+ T+ L +F S G + ++ + + F+ AAMAI+
Sbjct: 229 PAYNTTVYVGNLVPYCTQADLIPLFQSIGYLSEIRM--QADRGFAFVKLDTHEHAAMAIV 286
Query: 113 SLNGRHLFGQPIKVNWAYASGQREDTSGHFNIFVGDLSP 151
L G+ + G+PIK +W ++ G + G LSP
Sbjct: 287 QLQGQMVHGRPIKCSWG-----KDRADGGVALPAGSLSP 320
>gi|392571669|gb|EIW64841.1| RNA-binding domain-containing protein [Trametes versicolor
FP-101664 SS1]
Length = 437
Score = 240 bits (613), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 140/337 (41%), Positives = 190/337 (56%), Gaps = 51/337 (15%)
Query: 59 VYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKS------SYGFIHYFDRRSAAMAIL 112
+YVGN+ +VTE +L E+F+ GPV+ K+I D++ +YGF+ Y D R+A A+
Sbjct: 18 LYVGNLSPRVTEYMLTEIFAVAGPVQHVKII-PDRNYQHGGLNYGFVEYMDMRAAETALQ 76
Query: 113 SLNGRHLFGQPIKVNWAYASGQ-REDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDA 171
+LNGR +F I+VNWAY Q +EDTS H+++FVGDLSPEV D L FS + + SDA
Sbjct: 77 TLNGRKIFDTEIRVNWAYQGQQNKEDTSNHYHVFVGDLSPEVNDEVLGKAFSAFGTLSDA 136
Query: 172 RVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWA---TKGA------ 222
RVMWD +G+SRG+GF++FR++ DA+ AI + G+WLGSR IR NWA T+G+
Sbjct: 137 RVMWDMNSGKSRGYGFLAFRDKTDAEQAIATMNGEWLGSRAIRVNWANQKTQGSPGGPGG 196
Query: 223 ----------------GNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVY 266
+ A + + T G E T+ P N TTVY
Sbjct: 197 PGGPGGPGGPGGPGGPPRSNSMGGGGAPAPMNFTGGPLS--YEGVVTQTPAYN---TTVY 251
Query: 267 VGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSS 326
VGNL P TQ DL F S+ G + E+R+Q D+GF FV+ TH AA+AI Q
Sbjct: 252 VGNLVPYATQADLIPLFQSI--GYLSEIRMQSDRGFAFVKLDTHEHAAMAIVQ---LQGQ 306
Query: 327 YLFGKQMKCSWGSK-----PTPPGTSSNPLPPPAAAP 358
+ G+ +KCSWG P PG+ S P P AAP
Sbjct: 307 LVHGRPIKCSWGKDRADGAPISPGSMS---PAPVAAP 340
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 95/205 (46%), Gaps = 39/205 (19%)
Query: 143 NIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGR-SRGFGFVSFRNQQDAQSAIN 201
+++VG+LSP VT+ L F+V +++ D+ +GFV + + + A++A+
Sbjct: 17 HLYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDRNYQHGGLNYGFVEYMDMRAAETALQ 76
Query: 202 DLTGKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQ 261
L G+ + +IR NWA +G N ED T+N
Sbjct: 77 TLNGRKIFDTEIRVNWAYQGQQNKED----------------------TSN--------- 105
Query: 262 YTTVYVGNLAPEVTQLDLHRHFHSLG----AGVIEEVRVQRDKGFGFVRYSTHAEAALAI 317
+ V+VG+L+PEV L + F + G A V+ ++ + +G+GF+ + +A AI
Sbjct: 106 HYHVFVGDLSPEVNDEVLGKAFSAFGTLSDARVMWDMNSGKSRGYGFLAFRDKTDAEQAI 165
Query: 318 QMGNTTQSSYLFGKQMKCSWGSKPT 342
T +L + ++ +W ++ T
Sbjct: 166 A---TMNGEWLGSRAIRVNWANQKT 187
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 83/222 (37%), Gaps = 62/222 (27%)
Query: 52 DPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKS----SYGFIHYFDRRSA 107
D S V+VG++ +V + +L + FS+ G + +++ S YGF+ + D+ A
Sbjct: 102 DTSNHYHVFVGDLSPEVNDEVLGKAFSAFGTLSDARVMWDMNSGKSRGYGFLAFRDKTDA 161
Query: 108 AMAILSLNGRHLFGQPIKVNWAYASGQ-------------------------REDTSGH- 141
AI ++NG L + I+VNWA Q R ++ G
Sbjct: 162 EQAIATMNGEWLGSRAIRVNWANQKTQGSPGGPGGPGGPGGPGGPGGPGGPPRSNSMGGG 221
Query: 142 -----FNIFVGDLS---------------------PEVTDATLFACFSVYPSCSDARVMW 175
N G LS P T A L F S+ R+
Sbjct: 222 GAPAPMNFTGGPLSYEGVVTQTPAYNTTVYVGNLVPYATQADLIPLFQSIGYLSEIRMQS 281
Query: 176 DQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNW 217
D RGF FV + A AI L G+ + R I+C+W
Sbjct: 282 D------RGFAFVKLDTHEHAAMAIVQLQGQLVHGRPIKCSW 317
Score = 45.4 bits (106), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 55/114 (48%), Gaps = 12/114 (10%)
Query: 53 PSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSSYGFIHYFDRRSAAMAIL 112
P+ +VYVGN+ T+ L +F S G + ++ + + F+ AAMAI+
Sbjct: 244 PAYNTTVYVGNLVPYATQADLIPLFQSIGYLSEIRM--QSDRGFAFVKLDTHEHAAMAIV 301
Query: 113 SLNGRHLFGQPIKVNWAYASGQREDTSGHFNIFVGDLSPEVTDATLFACFSVYP 166
L G+ + G+PIK +W +D + I G +SP A + A ++V P
Sbjct: 302 QLQGQLVHGRPIKCSWG------KDRADGAPISPGSMSP----APVAAPYNVVP 345
>gi|406861752|gb|EKD14805.1| RNA recognition domain-containing protein [Marssonina brunnea f.
sp. 'multigermtubi' MB_m1]
Length = 495
Score = 239 bits (609), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 140/319 (43%), Positives = 188/319 (58%), Gaps = 21/319 (6%)
Query: 57 RSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS----YGFIHYFDRRSAAMAIL 112
R++YVG + +VTE +L+++F +TG V+ K+I DK+S YGF+ Y D +A A+
Sbjct: 89 RALYVGGLDPRVTEDVLRQIFETTGHVQNVKII-PDKNSKGFNYGFVEYDDPAAAERAMQ 147
Query: 113 SLNGRHLFGQPIKVNWAYASG--QREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSD 170
+LNGR + I+VNWAY S +EDTS HF+IFVGDLS EV D L FS + S S+
Sbjct: 148 TLNGRRVHQAEIRVNWAYQSNTSNKEDTSNHFHIFVGDLSNEVNDEVLLQAFSAFGSVSE 207
Query: 171 ARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT-KGAGNNEDKQ 229
ARVMWD KTGRSRG+GFV+FR +QDA+ A++ + G+WLGSR IRCNWA KG + +Q
Sbjct: 208 ARVMWDMKTGRSRGYGFVAFRERQDAEKALSSMDGEWLGSRAIRCNWANQKGQPSISQQQ 267
Query: 230 SSDAKSVVELT----NGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHS 285
+ A + T + G ++ + + TTVYVGNL P TQ DL F +
Sbjct: 268 AMSAMGMTSTTPFGHHHFPTHGVQSYDMIVQQTPAWQTTVYVGNLTPYTTQNDLIPLFQN 327
Query: 286 LGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSY-LFGKQMKCSWGSKPTP- 343
G + E R Q D+GF FV+ TH AA+AI S Y + G+ +KCSWG P
Sbjct: 328 F--GYVVETRFQADRGFAFVKMDTHENAAMAI----CQLSGYNVNGRPLKCSWGKDKAPG 381
Query: 344 -PGTSSNPLPPPAAAPIPG 361
PG + P A PG
Sbjct: 382 QPGADGSQAPWSPAVQTPG 400
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 88/212 (41%), Gaps = 47/212 (22%)
Query: 52 DPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKS----SYGFIHYFDRRSA 107
D S ++VG++ +V + +L + FS+ G V +++ K+ YGF+ + +R+ A
Sbjct: 174 DTSNHFHIFVGDLSNEVNDEVLLQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRERQDA 233
Query: 108 AMAILSLNGRHLFGQPIKVNWAYASGQREDTS---------------GHFN--------- 143
A+ S++G L + I+ NWA GQ + GH +
Sbjct: 234 EKALSSMDGEWLGSRAIRCNWANQKGQPSISQQQAMSAMGMTSTTPFGHHHFPTHGVQSY 293
Query: 144 -------------IFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSF 190
++VG+L+P T L F + + R D RGF FV
Sbjct: 294 DMIVQQTPAWQTTVYVGNLTPYTTQNDLIPLFQNFGYVVETRFQAD------RGFAFVKM 347
Query: 191 RNQQDAQSAINDLTGKWLGSRQIRCNWATKGA 222
++A AI L+G + R ++C+W A
Sbjct: 348 DTHENAAMAICQLSGYNVNGRPLKCSWGKDKA 379
>gi|328863696|gb|EGG12795.1| hypothetical protein MELLADRAFT_73862 [Melampsora larici-populina
98AG31]
Length = 477
Score = 237 bits (605), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 137/325 (42%), Positives = 188/325 (57%), Gaps = 27/325 (8%)
Query: 59 VYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKS------SYGFIHYFDRRSAAMAIL 112
+YVGN+ +VTE +LQE+FS G V+G K+I D++ +YGF+ Y++ RSA A+
Sbjct: 110 LYVGNLSPRVTEYMLQEIFSVAGSVQGVKII-PDRNFQHGGLNYGFVEYYEMRSAETALQ 168
Query: 113 SLNGRHLFGQPIKVNWAYASGQ----REDTSGHFNIFVGDLSPEVTDATLFACFSVYPSC 168
+L GR +F I+VNWAY + Q +ED SGHF++FVGDLSPEV D L F+ + S
Sbjct: 169 TLGGRKIFDNEIRVNWAYQNSQQNAVKEDLSGHFHVFVGDLSPEVNDDVLAKAFAAFGSL 228
Query: 169 SDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATK-------- 220
SDARVMWD +G+SRG+GF++FR++ DA+ AI + G+WLGSR IR NWA +
Sbjct: 229 SDARVMWDMNSGKSRGYGFLAFRDKTDAEQAIATMNGEWLGSRAIRVNWANQKNQGMPGA 288
Query: 221 -GAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEA-PENNPQY-TTVYVGNLAPEVTQL 277
G+ + G G + EA + P Y +TVY GNL P TQ
Sbjct: 289 PGSAMGGGNMGGMNGGMNRAGGGGGGGGFGANSYEAVVQQAPAYNSTVYTGNLVPYCTQA 348
Query: 278 DLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSW 337
DL F G G I E+R+Q D+GF FV+ TH AA+AI N T + + G+ +KCSW
Sbjct: 349 DLIPLFQ--GFGYIVEIRMQADRGFAFVKLDTHENAAMAIV--NLTGTP-VHGRPLKCSW 403
Query: 338 GSKPTPPGTSSNPLPPPAAAPIPGL 362
G +S P A AP+ G+
Sbjct: 404 GKDRASADPNSATNPAMAMAPVAGM 428
>gi|296423176|ref|XP_002841131.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295637365|emb|CAZ85322.1| unnamed protein product [Tuber melanosporum]
Length = 498
Score = 236 bits (603), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 134/301 (44%), Positives = 183/301 (60%), Gaps = 19/301 (6%)
Query: 57 RSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS----YGFIHYFDRRSAAMAIL 112
R++YVG + +VTE +L+++F +TG V+ K+I DK+S YGFI Y D +A A+
Sbjct: 86 RALYVGGLDPRVTEEILKQIFETTGHVQNVKII-PDKNSKGYNYGFIEYDDPGAAERAMQ 144
Query: 113 SLNGRHLFGQPIKVNWAYASGQ--REDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSD 170
+LNGR + I+VNWAY S Q +EDT+ HF+IFVGDLS EV D L FS + S S+
Sbjct: 145 TLNGRRIHQAEIRVNWAYQSNQSSKEDTTNHFHIFVGDLSNEVNDEVLMQAFSTFGSVSE 204
Query: 171 ARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQS 230
ARVMWD KTGRSRG+GFV+FR++ DA+ A++ + G+WLGSR IRCNWA + + +Q+
Sbjct: 205 ARVMWDMKTGRSRGYGFVAFRDRADAEKALSSMDGEWLGSRAIRCNWANQKGQPSISQQA 264
Query: 231 SDAKSVVELTNGSSEDGKETTNTEA----PENNPQY-TTVYVGNLAPEVTQLDLHRHFHS 285
+ A + T T ++ + PQ+ TT YVGNL P TQ DL F +
Sbjct: 265 AMAAMGMTPTTPYGHHNFPTHGVQSYDMIVQQTPQWQTTCYVGNLTPYTTQNDLVPLFQN 324
Query: 286 LGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSY-LFGKQMKCSWGSKPTPP 344
G + E R Q D+GF FV+ TH AA+AI S Y + G+ +KCSWG P
Sbjct: 325 F--GYVVETRFQADRGFAFVKMDTHENAAMAI----CQLSGYNVNGRPLKCSWGKDRPPT 378
Query: 345 G 345
G
Sbjct: 379 G 379
>gi|392597176|gb|EIW86498.1| hypothetical protein CONPUDRAFT_78829 [Coniophora puteana
RWD-64-598 SS2]
Length = 439
Score = 236 bits (602), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 127/299 (42%), Positives = 175/299 (58%), Gaps = 21/299 (7%)
Query: 59 VYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKS------SYGFIHYFDRRSAAMAIL 112
+YVGN+ +VTE +L E+F+ GPV+ K+I D++ +YGF+ Y D R+A A+
Sbjct: 19 LYVGNLSPRVTEYMLTEIFAVAGPVQHVKII-PDRNYQHGGLNYGFVEYLDMRAAETALQ 77
Query: 113 SLNGRHLFGQPIKVNWAYASGQ-REDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDA 171
+LNGR +F I+VNWAY Q +EDTSGHF++FVGDLSPEV D L F+ + + SDA
Sbjct: 78 TLNGRKIFDTEIRVNWAYQGQQNKEDTSGHFHVFVGDLSPEVNDEVLAKAFAAFGTMSDA 137
Query: 172 RVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSS 231
RVMWD +G+SRG+GF++FR++ DA+ AI + G+WLGSR IR NWA + +
Sbjct: 138 RVMWDMNSGKSRGYGFLAFRDKTDAEQAIATMNGEWLGSRAIRVNWANQKTQGAPAVGAG 197
Query: 232 DAKSVVELTNGSSE-------DGKETTNTEAPENNPQY-TTVYVGNLAPEVTQLDLHRHF 283
G G + + P Y +TVYVGNL P TQ DL F
Sbjct: 198 APAPRPGGGGGVGTAPAPINFQGGPLSYESVVQQTPSYNSTVYVGNLVPYCTQADLIPLF 257
Query: 284 HSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSKPT 342
S+ G + E+R+Q D+GF FV+ TH AA+AI Q + G+ +KCSWG T
Sbjct: 258 QSI--GYLSEIRMQADRGFAFVKLDTHEHAAMAIVQ---LQGQMVHGRPIKCSWGKDRT 311
>gi|388579312|gb|EIM19637.1| hypothetical protein WALSEDRAFT_33897 [Wallemia sebi CBS 633.66]
Length = 423
Score = 236 bits (602), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 128/290 (44%), Positives = 174/290 (60%), Gaps = 17/290 (5%)
Query: 59 VYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS-----YGFIHYFDRRSAAMAILS 113
+YVGN+ +VTE +L E+F+ G V+ K+I S YGF+ Y D R+A A+ +
Sbjct: 17 LYVGNLSPRVTEYMLTEIFAVAGHVQSVKIIPDRNFSHGGLNYGFVEYTDMRAAETALQT 76
Query: 114 LNGRHLFGQPIKVNWAY-ASGQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDAR 172
LNGR +F I+VNWAY + ++EDT+ HF++FVGDLSPEV D L FS + S SDAR
Sbjct: 77 LNGRKIFDTEIRVNWAYQGNNKQEDTTNHFHVFVGDLSPEVNDEILSKAFSGFKSISDAR 136
Query: 173 VMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSSD 232
VMWD TG+SRG+GF+SFR + DA+ AI+ + G+WLGSR IR NWA + + +D
Sbjct: 137 VMWDMNTGKSRGYGFLSFREKTDAEQAISTMNGEWLGSRAIRVNWANQKTQTGSHRL-ND 195
Query: 233 AKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIE 292
+ NG E + P N TTVY+GNL P TQ DL F + G I
Sbjct: 196 LMPTMNAFNGPLS--YEAVFQQTPAYN---TTVYIGNLTPYTTQADLVPIFQAF--GYII 248
Query: 293 EVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSKPT 342
EVR+Q D+GF FV+ +H A++AI Q + + G+ +KCSWG T
Sbjct: 249 EVRMQADRGFAFVKLDSHENASMAIVQ---LQGTLIQGRPIKCSWGRDRT 295
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 87/206 (42%), Gaps = 42/206 (20%)
Query: 52 DPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS----YGFIHYFDRRSA 107
D + V+VG++ +V + +L + FS + +++ + YGF+ + ++ A
Sbjct: 101 DTTNHFHVFVGDLSPEVNDEILSKAFSGFKSISDARVMWDMNTGKSRGYGFLSFREKTDA 160
Query: 108 AMAILSLNGRHLFGQPIKVNWAYASGQREDTSGH-----------FN------------- 143
AI ++NG L + I+VNWA Q+ T H FN
Sbjct: 161 EQAISTMNGEWLGSRAIRVNWA---NQKTQTGSHRLNDLMPTMNAFNGPLSYEAVFQQTP 217
Query: 144 -----IFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQS 198
+++G+L+P T A L F + + R+ D RGF FV + ++A
Sbjct: 218 AYNTTVYIGNLTPYTTQADLVPIFQAFGYIIEVRMQAD------RGFAFVKLDSHENASM 271
Query: 199 AINDLTGKWLGSRQIRCNWATKGAGN 224
AI L G + R I+C+W N
Sbjct: 272 AIVQLQGTLIQGRPIKCSWGRDRTAN 297
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 94/208 (45%), Gaps = 39/208 (18%)
Query: 144 IFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGR-SRGFGFVSFRNQQDAQSAIND 202
++VG+LSP VT+ L F+V +++ D+ +GFV + + + A++A+
Sbjct: 17 LYVGNLSPRVTEYMLTEIFAVAGHVQSVKIIPDRNFSHGGLNYGFVEYTDMRAAETALQT 76
Query: 203 LTGKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQY 262
L G+ + +IR NWA +G ED TTN +
Sbjct: 77 LNGRKIFDTEIRVNWAYQGNNKQED----------------------TTN---------H 105
Query: 263 TTVYVGNLAPEVTQLDLHRHFHSL----GAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQ 318
V+VG+L+PEV L + F A V+ ++ + +G+GF+ + +A AI
Sbjct: 106 FHVFVGDLSPEVNDEILSKAFSGFKSISDARVMWDMNTGKSRGYGFLSFREKTDAEQAI- 164
Query: 319 MGNTTQSSYLFGKQMKCSWGSKPTPPGT 346
+T +L + ++ +W ++ T G+
Sbjct: 165 --STMNGEWLGSRAIRVNWANQKTQTGS 190
>gi|389742195|gb|EIM83382.1| polyadenylate-binding protein [Stereum hirsutum FP-91666 SS1]
Length = 422
Score = 236 bits (601), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 130/315 (41%), Positives = 179/315 (56%), Gaps = 19/315 (6%)
Query: 59 VYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKS------SYGFIHYFDRRSAAMAIL 112
+YVGN+ +VTE +L E+F+ GPV+ K+I D++ +YGF+ Y D R+A A+
Sbjct: 18 LYVGNLSPRVTEYMLTEIFAVAGPVQHVKII-PDRNYQHGGLNYGFVEYMDMRAAETALQ 76
Query: 113 SLNGRHLFGQPIKVNWAYASGQ-REDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDA 171
+LNGR +F I+VNWAY Q +EDTS HF++FVGDLSPEV D L F+ + + SDA
Sbjct: 77 TLNGRKIFDTEIRVNWAYQGQQNKEDTSNHFHVFVGDLSPEVNDDVLAKAFAAFGTMSDA 136
Query: 172 RVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSS 231
RVMWD +G+SRG+GF++FR++ DA+ AI + G+WLGSR IR NWA +
Sbjct: 137 RVMWDMNSGKSRGYGFLAFRDKTDAEQAIATMNGEWLGSRAIRVNWANQKTQGGLPVSGG 196
Query: 232 DAKSVVELTNGSSE-----DGKETTNTEAPENNPQY-TTVYVGNLAPEVTQLDLHRHFHS 285
S G + G + + P + TTVYVGNL P TQ DL F S
Sbjct: 197 PTASPTRTGAGGAPAPINFQGGPLSYESVVQQTPAFNTTVYVGNLVPYCTQSDLIPLFQS 256
Query: 286 LGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSKPTPPG 345
+ G + E+R+Q D+GF FV+ TH AA+AI Q + G+ +KCSWG G
Sbjct: 257 I--GYLSEIRMQADRGFAFVKLDTHEHAAMAIVQ---LQGQLVHGRPIKCSWGKDRADGG 311
Query: 346 TSSNPLPPPAAAPIP 360
+ PA P
Sbjct: 312 AAGTAPMSPATGAAP 326
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 107/244 (43%), Gaps = 46/244 (18%)
Query: 143 NIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGR-SRGFGFVSFRNQQDAQSAIN 201
+++VG+LSP VT+ L F+V +++ D+ +GFV + + + A++A+
Sbjct: 17 HLYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDRNYQHGGLNYGFVEYMDMRAAETALQ 76
Query: 202 DLTGKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQ 261
L G+ + +IR NWA +G N ED T+N
Sbjct: 77 TLNGRKIFDTEIRVNWAYQGQQNKED----------------------TSN--------- 105
Query: 262 YTTVYVGNLAPEVTQLDLHRHFHSLG----AGVIEEVRVQRDKGFGFVRYSTHAEAALAI 317
+ V+VG+L+PEV L + F + G A V+ ++ + +G+GF+ + +A AI
Sbjct: 106 HFHVFVGDLSPEVNDDVLAKAFAAFGTMSDARVMWDMNSGKSRGYGFLAFRDKTDAEQAI 165
Query: 318 QMGNTTQSSYLFGKQMKCSWGSKPTPPG--TSSNPLPPP-----AAAPIPGLSAADLLAY 370
T +L + ++ +W ++ T G S P P AP P L+Y
Sbjct: 166 A---TMNGEWLGSRAIRVNWANQKTQGGLPVSGGPTASPTRTGAGGAPAPINFQGGPLSY 222
Query: 371 ERQI 374
E +
Sbjct: 223 ESVV 226
Score = 43.1 bits (100), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 40/77 (51%), Gaps = 2/77 (2%)
Query: 53 PSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSSYGFIHYFDRRSAAMAIL 112
P+ +VYVGN+ T+ L +F S G + ++ + + F+ AAMAI+
Sbjct: 230 PAFNTTVYVGNLVPYCTQSDLIPLFQSIGYLSEIRM--QADRGFAFVKLDTHEHAAMAIV 287
Query: 113 SLNGRHLFGQPIKVNWA 129
L G+ + G+PIK +W
Sbjct: 288 QLQGQLVHGRPIKCSWG 304
>gi|449302198|gb|EMC98207.1| hypothetical protein BAUCODRAFT_416441 [Baudoinia compniacensis
UAMH 10762]
Length = 479
Score = 234 bits (598), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 141/323 (43%), Positives = 195/323 (60%), Gaps = 33/323 (10%)
Query: 57 RSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKS------SYGFIHYFDRRSAAMA 110
R++YVG + +VTE +L+++F +TG V+ K+I DK+ +YGF+ Y D + A A
Sbjct: 82 RALYVGGLDPRVTEDVLKQIFETTGHVQSVKII-PDKNFQSKGYNYGFVEYDDPQCAERA 140
Query: 111 ILSLNGRHLFGQPIKVNWAYASG--QREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSC 168
+ +LNGR + Q I+VNWAY S +EDTS HF+IFVGDLS EV D L FS + +
Sbjct: 141 MQTLNGRRVHQQEIRVNWAYQSNTISKEDTSNHFHIFVGDLSNEVNDEVLLQAFSAFGTV 200
Query: 169 SDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDK 228
S+ARVMWD KTGRSRG+GFVSFR++ DA+ A++ + G+WLGSR IRCNWA N + +
Sbjct: 201 SEARVMWDMKTGRSRGYGFVSFRDRGDAEKALSSMDGEWLGSRAIRCNWA-----NQKGQ 255
Query: 229 QS-SDAKSVVEL-TNGSSEDGKETTNTEAPEN-------NPQY-TTVYVGNLAPEVTQLD 278
S S A+++V++ ++ G T T+ ++ PQ+ TT YVGNL P TQ D
Sbjct: 256 PSYSQAQAMVQMGMTPTTPYGHHTFPTQGAQSFEMIVQQTPQWQTTCYVGNLTPYTTQND 315
Query: 279 LHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSY-LFGKQMKCSW 337
L F + G + E R D+GF FV+ TH AA AI S Y + G+ +KCSW
Sbjct: 316 LVPLFQNF--GYVTETRFHSDRGFAFVKMDTHENAANAI----CQLSGYNVNGRPLKCSW 369
Query: 338 GSKPTPPG--TSSNPLPPPAAAP 358
G P G +P PP +A P
Sbjct: 370 GKDRPPTGQFDGYSPAPPQSAFP 392
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 86/207 (41%), Gaps = 47/207 (22%)
Query: 52 DPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKS----SYGFIHYFDRRSA 107
D S ++VG++ +V + +L + FS+ G V +++ K+ YGF+ + DR A
Sbjct: 169 DTSNHFHIFVGDLSNEVNDEVLLQAFSAFGTVSEARVMWDMKTGRSRGYGFVSFRDRGDA 228
Query: 108 AMAILSLNGRHLFGQPIKVNWAYASGQREDTS---------------GHFNI-------- 144
A+ S++G L + I+ NWA GQ + GH
Sbjct: 229 EKALSSMDGEWLGSRAIRCNWANQKGQPSYSQAQAMVQMGMTPTTPYGHHTFPTQGAQSF 288
Query: 145 --------------FVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSF 190
+VG+L+P T L F + ++ R D RGF FV
Sbjct: 289 EMIVQQTPQWQTTCYVGNLTPYTTQNDLVPLFQNFGYVTETRFHSD------RGFAFVKM 342
Query: 191 RNQQDAQSAINDLTGKWLGSRQIRCNW 217
++A +AI L+G + R ++C+W
Sbjct: 343 DTHENAANAICQLSGYNVNGRPLKCSW 369
>gi|443924183|gb|ELU43247.1| polyadenylate-binding protein [Rhizoctonia solani AG-1 IA]
Length = 498
Score = 234 bits (597), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 131/314 (41%), Positives = 177/314 (56%), Gaps = 36/314 (11%)
Query: 54 STCRS--------VYVGNIHTQVTEPLLQEVFSSTGPVEGCKLI-----RKDKSSYGFIH 100
STC S +YVGN+ +VTE +L E+F+ GPV+ K+I + +YGF+
Sbjct: 35 STCSSAEAPRRAHLYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDRNYQHGGQNYGFVE 94
Query: 101 YFDRRSAAMAILSLNGRHLFGQPIKVNWAYASGQ-REDTSGHFNIFVGDLSPEVTDATLF 159
Y D R+A A+ +LNGR +F I+VNWAY Q +EDTS H+++FVGDLSPEV D L
Sbjct: 95 YMDMRAAETALQTLNGRKIFDTEIRVNWAYQGTQNKEDTSNHYHVFVGDLSPEVNDEVLA 154
Query: 160 ACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT 219
F+ + S SDARVMWD +G+SRG+GF++FR++ DA+ AI + G+WLGSR IR NWA
Sbjct: 155 KAFAAFGSLSDARVMWDMNSGKSRGYGFLAFRDKTDAEQAIATMNGEWLGSRAIRVNWAN 214
Query: 220 KGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPEN--------------NPQY-TT 264
+ + + + G AP N P Y TT
Sbjct: 215 Q--KTQSGGGGGMPPGMPSMGDSMGMGGGAMGGVPAPMNFQGGPLSYESVVSQTPAYNTT 272
Query: 265 VYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQ 324
VYVGNL P TQ DL F S+ G + E+R+Q D+GF FV+ TH AA+AI Q
Sbjct: 273 VYVGNLVPYCTQADLIPLFQSI--GYLSEIRMQADRGFAFVKLDTHENAAMAIVQ---LQ 327
Query: 325 SSYLFGKQMKCSWG 338
+ G+ +KCSWG
Sbjct: 328 GQLVHGRPIKCSWG 341
Score = 44.7 bits (104), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 43/76 (56%), Gaps = 2/76 (2%)
Query: 53 PSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSSYGFIHYFDRRSAAMAIL 112
P+ +VYVGN+ T+ L +F S G + ++ + D+ + F+ +AAMAI+
Sbjct: 267 PAYNTTVYVGNLVPYCTQADLIPLFQSIGYLSEIRM-QADR-GFAFVKLDTHENAAMAIV 324
Query: 113 SLNGRHLFGQPIKVNW 128
L G+ + G+PIK +W
Sbjct: 325 QLQGQLVHGRPIKCSW 340
Score = 41.2 bits (95), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 51/107 (47%), Gaps = 12/107 (11%)
Query: 243 SSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDK-- 300
+S+ G + +T + P+ +YVGNL+P VT+ L F AG ++ V++ D+
Sbjct: 26 ASDHGCLSVSTCSSAEAPRRAHLYVGNLSPRVTEYMLTEIFAV--AGPVQHVKIIPDRNY 83
Query: 301 -----GFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSKPT 342
+GFV Y A A+Q T +F +++ +W + T
Sbjct: 84 QHGGQNYGFVEYMDMRAAETALQ---TLNGRKIFDTEIRVNWAYQGT 127
>gi|453087889|gb|EMF15930.1| RRM_1-domain-containing protein [Mycosphaerella populorum SO2202]
Length = 486
Score = 234 bits (597), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 142/345 (41%), Positives = 199/345 (57%), Gaps = 24/345 (6%)
Query: 57 RSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKS------SYGFIHYFDRRSAAMA 110
R++YVG + +VTE +L+++F +TG V+ K+I DK+ +YGF+ Y D +A A
Sbjct: 81 RALYVGGLDPRVTEDVLKQIFETTGHVQSVKII-PDKNFQSKGYNYGFVEYDDPGAAERA 139
Query: 111 ILSLNGRHLFGQPIKVNWAYASGQ--REDTSGHFNIFVGDLSPEVTDATLFACFSVYPSC 168
+ +LNGR + Q I+VNWAY S +EDTS HF+IFVGDLS EV D L FS + +
Sbjct: 140 MQTLNGRRVHQQEIRVNWAYQSNTSAKEDTSNHFHIFVGDLSNEVNDEVLLQAFSAFGTV 199
Query: 169 SDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDK 228
S+ARVMWD KTGRSRG+GF +FR++ +A+ A++ + G+WLGSR IRCNWA + + +
Sbjct: 200 SEARVMWDMKTGRSRGYGFAAFRDRGEAEKALSSMDGEWLGSRAIRCNWANQKGQPSFSQ 259
Query: 229 QSSDAKSVVELTNGSSEDGKETTNTEAPE----NNPQY-TTVYVGNLAPEVTQLDLHRHF 283
Q + A+ + T T +++ E PQ+ TTVYVGNL P TQ DL F
Sbjct: 260 QQAMAQMGMTPTTPYGHHQFPTQGSQSYEMIVQQTPQWQTTVYVGNLTPYTTQNDLVPLF 319
Query: 284 HSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSKPTP 343
+ G + E R Q D+GF F++ TH AA AI + Q + G+ +KCSWG K P
Sbjct: 320 QNF--GYVTETRFQSDRGFAFIKMDTHENAANAICQLSGYQ---VNGRPLKCSWG-KDRP 373
Query: 344 PGTSSNPLPPPAAAPIPGLSAADLLA----YERQIAMSKMGGVHA 384
P + P A P +A A Y++ AMS G A
Sbjct: 374 PTGQFDGFSPAAQTPGSAFPSATPQAFFPQYQQPGAMSPQGATPA 418
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 86/207 (41%), Gaps = 47/207 (22%)
Query: 52 DPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKS----SYGFIHYFDRRSA 107
D S ++VG++ +V + +L + FS+ G V +++ K+ YGF + DR A
Sbjct: 168 DTSNHFHIFVGDLSNEVNDEVLLQAFSAFGTVSEARVMWDMKTGRSRGYGFAAFRDRGEA 227
Query: 108 AMAILSLNGRHLFGQPIKVNWAYASGQREDTS---------------GHF---------- 142
A+ S++G L + I+ NWA GQ + GH
Sbjct: 228 EKALSSMDGEWLGSRAIRCNWANQKGQPSFSQQQAMAQMGMTPTTPYGHHQFPTQGSQSY 287
Query: 143 ------------NIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSF 190
++VG+L+P T L F + ++ R D RGF F+
Sbjct: 288 EMIVQQTPQWQTTVYVGNLTPYTTQNDLVPLFQNFGYVTETRFQSD------RGFAFIKM 341
Query: 191 RNQQDAQSAINDLTGKWLGSRQIRCNW 217
++A +AI L+G + R ++C+W
Sbjct: 342 DTHENAANAICQLSGYQVNGRPLKCSW 368
Score = 41.2 bits (95), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 44/93 (47%), Gaps = 6/93 (6%)
Query: 53 PSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSSYGFIHYFDRRSAAMAIL 112
P +VYVGN+ T+ L +F + G V + + + FI +AA AI
Sbjct: 295 PQWQTTVYVGNLTPYTTQNDLVPLFQNFGYVTETRF--QSDRGFAFIKMDTHENAANAIC 352
Query: 113 SLNGRHLFGQPIKVNWAYASGQREDTSGHFNIF 145
L+G + G+P+K +W G+ +G F+ F
Sbjct: 353 QLSGYQVNGRPLKCSW----GKDRPPTGQFDGF 381
>gi|41581275|emb|CAE47924.1| oligouridylate binding protein, putative [Aspergillus fumigatus]
Length = 485
Score = 234 bits (596), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 134/307 (43%), Positives = 185/307 (60%), Gaps = 21/307 (6%)
Query: 57 RSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKS------SYGFIHYFDRRSAAMA 110
R++YVG + +VTE +L+++F +TG V+ K+I DK+ +YGF+ + D +A A
Sbjct: 91 RALYVGGLDPRVTEDILKQIFETTGHVQSVKII-PDKNFNSKGYNYGFVEFDDPGAAERA 149
Query: 111 ILSLNGRHLFGQPIKVNWAYAS--GQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSC 168
+ +LNGR + I+VNWAY S +EDTS HF+IFVGDLS EV D L FS + S
Sbjct: 150 MQTLNGRRIHQSEIRVNWAYQSNSANKEDTSSHFHIFVGDLSNEVNDEILLQAFSAFGSV 209
Query: 169 SDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT-KGAGNNED 227
S+ARVMWD KTGRSRG+GFV+FR + DA+ A+N + G+WLGSR IRCNWA KG +
Sbjct: 210 SEARVMWDMKTGRSRGYGFVAFRERADAEKALNAMDGEWLGSRAIRCNWANQKGQPSISQ 269
Query: 228 KQSSDAKSVVELT----NGSSEDGKETTNTEAPENNPQY-TTVYVGNLAPEVTQLDLHRH 282
+Q+ A + T + G ++ + + PQ+ TT YVGNL P TQ DL
Sbjct: 270 QQAMAAMGMTPTTPFGHHHFPTHGVQSYDMVV-QQTPQWQTTCYVGNLTPYTTQNDLVPL 328
Query: 283 FHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSKPT 342
FH+ G + E R+Q D+GF F++ TH AA+AI N + G+ +KCSWG
Sbjct: 329 FHNF--GYVLETRLQADRGFAFIKMDTHENAAMAICQLNGYN---VNGRPLKCSWGKDRP 383
Query: 343 PPGTSSN 349
P G N
Sbjct: 384 PTGQFDN 390
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 86/208 (41%), Gaps = 47/208 (22%)
Query: 52 DPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKS----SYGFIHYFDRRSA 107
D S+ ++VG++ +V + +L + FS+ G V +++ K+ YGF+ + +R A
Sbjct: 178 DTSSHFHIFVGDLSNEVNDEILLQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRERADA 237
Query: 108 AMAILSLNGRHLFGQPIKVNWAYASGQREDTS---------------GHFNI-------- 144
A+ +++G L + I+ NWA GQ + GH +
Sbjct: 238 EKALNAMDGEWLGSRAIRCNWANQKGQPSISQQQAMAAMGMTPTTPFGHHHFPTHGVQSY 297
Query: 145 --------------FVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSF 190
+VG+L+P T L F + + R+ D RGF F+
Sbjct: 298 DMVVQQTPQWQTTCYVGNLTPYTTQNDLVPLFHNFGYVLETRLQAD------RGFAFIKM 351
Query: 191 RNQQDAQSAINDLTGKWLGSRQIRCNWA 218
++A AI L G + R ++C+W
Sbjct: 352 DTHENAAMAICQLNGYNVNGRPLKCSWG 379
>gi|156058654|ref|XP_001595250.1| hypothetical protein SS1G_03339 [Sclerotinia sclerotiorum 1980]
gi|154701126|gb|EDO00865.1| hypothetical protein SS1G_03339 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 501
Score = 234 bits (596), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 147/354 (41%), Positives = 199/354 (56%), Gaps = 29/354 (8%)
Query: 57 RSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS----YGFIHYFDRRSAAMAIL 112
R++YVG + +VTE +L+++F +TG V+ K+I DK+S YGF+ Y D +A A+
Sbjct: 89 RALYVGGLDPRVTEEVLRQIFETTGHVQNVKII-PDKNSKGFNYGFVEYDDPGAAERAMQ 147
Query: 113 SLNGRHLFGQPIKVNWAYASG--QREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSD 170
+LNGR + I+VNWAY S +EDTS HF+IFVGDLS EV D L FS + S S+
Sbjct: 148 TLNGRRVHQAEIRVNWAYQSNTSNKEDTSNHFHIFVGDLSNEVNDEVLLQAFSAFGSVSE 207
Query: 171 ARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT-KGAGNNEDKQ 229
ARVMWD KTGRSRG+GF +FR +QDA+ A++ + G+WLGSR IRCNWA KG + +Q
Sbjct: 208 ARVMWDMKTGRSRGYGFAAFRERQDAEKALSSMDGEWLGSRAIRCNWANQKGQPSISQQQ 267
Query: 230 SSDAKSVVELT----NGSSEDGKETTNTEAPENNPQY-TTVYVGNLAPEVTQLDLHRHFH 284
+ A + T + G ++ + + PQ+ TT YVGNL P TQ DL F
Sbjct: 268 AMSAMGMTPTTPFGHHHFPTHGVQSYDMIV-QQTPQWQTTCYVGNLTPYTTQQDLVPLFQ 326
Query: 285 SLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSY-LFGKQMKCSWGSKPTP 343
+ G + E R Q D+GF FV+ +H AALAI S Y + G+ +KCSWG P
Sbjct: 327 NF--GYVVETRFQADRGFAFVKMDSHENAALAI----CQLSGYNVNGRPLKCSWGKDKAP 380
Query: 344 PGT---SSNPLPPPAAAPIPGLSAADLLAYERQIAMSKMGGVHALMHPQAQHPL 394
S P A P PG AY + GG+ PQ+ P+
Sbjct: 381 TSAGFDGSQQSYSPQAGPTPGGFPGTPNAY-----FPQYGGMPPQAGPQSAGPM 429
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 87/212 (41%), Gaps = 47/212 (22%)
Query: 52 DPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKS----SYGFIHYFDRRSA 107
D S ++VG++ +V + +L + FS+ G V +++ K+ YGF + +R+ A
Sbjct: 174 DTSNHFHIFVGDLSNEVNDEVLLQAFSAFGSVSEARVMWDMKTGRSRGYGFAAFRERQDA 233
Query: 108 AMAILSLNGRHLFGQPIKVNWAYASGQREDTS---------------GHFNI-------- 144
A+ S++G L + I+ NWA GQ + GH +
Sbjct: 234 EKALSSMDGEWLGSRAIRCNWANQKGQPSISQQQAMSAMGMTPTTPFGHHHFPTHGVQSY 293
Query: 145 --------------FVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSF 190
+VG+L+P T L F + + R D RGF FV
Sbjct: 294 DMIVQQTPQWQTTCYVGNLTPYTTQQDLVPLFQNFGYVVETRFQAD------RGFAFVKM 347
Query: 191 RNQQDAQSAINDLTGKWLGSRQIRCNWATKGA 222
+ ++A AI L+G + R ++C+W A
Sbjct: 348 DSHENAALAICQLSGYNVNGRPLKCSWGKDKA 379
>gi|119495558|ref|XP_001264561.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Neosartorya fischeri NRRL 181]
gi|119412723|gb|EAW22664.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Neosartorya fischeri NRRL 181]
Length = 477
Score = 234 bits (596), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 134/307 (43%), Positives = 185/307 (60%), Gaps = 21/307 (6%)
Query: 57 RSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKS------SYGFIHYFDRRSAAMA 110
R++YVG + +VTE +L+++F +TG V+ K+I DK+ +YGF+ + D +A A
Sbjct: 91 RALYVGGLDPRVTEDILKQIFETTGHVQSVKII-PDKNFNSKGYNYGFVEFDDPGAAERA 149
Query: 111 ILSLNGRHLFGQPIKVNWAYASG--QREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSC 168
+ +LNGR + I+VNWAY S +EDTS HF+IFVGDLS EV D L FS + S
Sbjct: 150 MQTLNGRRIHQSEIRVNWAYQSNSTNKEDTSSHFHIFVGDLSNEVNDEILLQAFSAFGSV 209
Query: 169 SDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT-KGAGNNED 227
S+ARVMWD KTGRSRG+GFV+FR + DA+ A+N + G+WLGSR IRCNWA KG +
Sbjct: 210 SEARVMWDMKTGRSRGYGFVAFRERADAEKALNAMDGEWLGSRAIRCNWANQKGQPSISQ 269
Query: 228 KQSSDAKSVVELT----NGSSEDGKETTNTEAPENNPQY-TTVYVGNLAPEVTQLDLHRH 282
+Q+ A + T + G ++ + + PQ+ TT YVGNL P TQ DL
Sbjct: 270 QQAMAAMGMTPTTPFGHHHFPTHGVQSYDMVV-QQTPQWQTTCYVGNLTPYTTQNDLVPL 328
Query: 283 FHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSKPT 342
FH+ G + E R+Q D+GF F++ TH AA+AI N + G+ +KCSWG
Sbjct: 329 FHNF--GYVLETRLQADRGFAFIKMDTHENAAMAICQLNGYN---VNGRPLKCSWGKDRP 383
Query: 343 PPGTSSN 349
P G N
Sbjct: 384 PTGQFDN 390
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 86/208 (41%), Gaps = 47/208 (22%)
Query: 52 DPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKS----SYGFIHYFDRRSA 107
D S+ ++VG++ +V + +L + FS+ G V +++ K+ YGF+ + +R A
Sbjct: 178 DTSSHFHIFVGDLSNEVNDEILLQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRERADA 237
Query: 108 AMAILSLNGRHLFGQPIKVNWAYASGQREDTS---------------GHFNI-------- 144
A+ +++G L + I+ NWA GQ + GH +
Sbjct: 238 EKALNAMDGEWLGSRAIRCNWANQKGQPSISQQQAMAAMGMTPTTPFGHHHFPTHGVQSY 297
Query: 145 --------------FVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSF 190
+VG+L+P T L F + + R+ D RGF F+
Sbjct: 298 DMVVQQTPQWQTTCYVGNLTPYTTQNDLVPLFHNFGYVLETRLQAD------RGFAFIKM 351
Query: 191 RNQQDAQSAINDLTGKWLGSRQIRCNWA 218
++A AI L G + R ++C+W
Sbjct: 352 DTHENAAMAICQLNGYNVNGRPLKCSWG 379
>gi|390604168|gb|EIN13559.1| hypothetical protein PUNSTDRAFT_117298 [Punctularia strigosozonata
HHB-11173 SS5]
Length = 425
Score = 233 bits (595), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 131/300 (43%), Positives = 178/300 (59%), Gaps = 20/300 (6%)
Query: 53 PSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKS------SYGFIHYFDRRS 106
P +YVGN+ +VTE +L E+F+ GPV+ K+I D++ +YGF+ Y D R+
Sbjct: 13 PQRRAHLYVGNLSPRVTEYMLTEIFAVAGPVQHVKII-PDRNYQHGGLNYGFVEYIDMRA 71
Query: 107 AAMAILSLNGRHLFGQPIKVNWAYASGQ-REDTSGHFNIFVGDLSPEVTDATLFACFSVY 165
A A+ +LNGR +F I+VNWAY Q +EDTS H+++FVGDLSPEV D L FS +
Sbjct: 72 AETALQTLNGRKIFDTEIRVNWAYQGNQNKEDTSNHYHVFVGDLSPEVNDEVLQKAFSAF 131
Query: 166 PSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT-KGAGN 224
S SDARVMWD +G+SRG+GF++FR++ DA+ AI + G+WLGSR IR NWA K G
Sbjct: 132 GSLSDARVMWDMNSGKSRGYGFLAFRDKTDAEQAIATMNGEWLGSRAIRVNWANQKTQGA 191
Query: 225 NEDKQSSDAKSVVELTNGSSE-----DGKETTNTEAPENNPQY-TTVYVGNLAPEVTQLD 278
+ A + G S G + P Y +TVYVGNL P TQ D
Sbjct: 192 MGGGAPAPAAARPSPGLGGSPAPMNFQGGPISYESVVSQTPAYNSTVYVGNLVPYCTQAD 251
Query: 279 LHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWG 338
L F S+ G ++E+R+Q D+GF FV+ TH AA+AI Q + G+ +KCSWG
Sbjct: 252 LIPLFQSI--GYLQEIRMQADRGFAFVKLDTHEHAAMAIIQ---LQGQMVHGRPIKCSWG 306
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 97/207 (46%), Gaps = 43/207 (20%)
Query: 143 NIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGR-SRGFGFVSFRNQQDAQSAIN 201
+++VG+LSP VT+ L F+V +++ D+ +GFV + + + A++A+
Sbjct: 18 HLYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDRNYQHGGLNYGFVEYIDMRAAETALQ 77
Query: 202 DLTGKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQ 261
L G+ + +IR NWA +G N ED T+N
Sbjct: 78 TLNGRKIFDTEIRVNWAYQGNQNKED----------------------TSN--------- 106
Query: 262 YTTVYVGNLAPEVTQLDLHRHFHSLG----AGVIEEVRVQRDKGFGFV--RYSTHAEAAL 315
+ V+VG+L+PEV L + F + G A V+ ++ + +G+GF+ R T AE A+
Sbjct: 107 HYHVFVGDLSPEVNDEVLQKAFSAFGSLSDARVMWDMNSGKSRGYGFLAFRDKTDAEQAI 166
Query: 316 AIQMGNTTQSSYLFGKQMKCSWGSKPT 342
A T +L + ++ +W ++ T
Sbjct: 167 A-----TMNGEWLGSRAIRVNWANQKT 188
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 85/209 (40%), Gaps = 49/209 (23%)
Query: 52 DPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKS----SYGFIHYFDRRSA 107
D S V+VG++ +V + +LQ+ FS+ G + +++ S YGF+ + D+ A
Sbjct: 103 DTSNHYHVFVGDLSPEVNDEVLQKAFSAFGSLSDARVMWDMNSGKSRGYGFLAFRDKTDA 162
Query: 108 AMAILSLNGRHLFGQPIKVNWA-------------------------------------- 129
AI ++NG L + I+VNWA
Sbjct: 163 EQAIATMNGEWLGSRAIRVNWANQKTQGAMGGGAPAPAAARPSPGLGGSPAPMNFQGGPI 222
Query: 130 -YASGQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFV 188
Y S + + + ++VG+L P T A L F + R+ D RGF FV
Sbjct: 223 SYESVVSQTPAYNSTVYVGNLVPYCTQADLIPLFQSIGYLQEIRMQAD------RGFAFV 276
Query: 189 SFRNQQDAQSAINDLTGKWLGSRQIRCNW 217
+ A AI L G+ + R I+C+W
Sbjct: 277 KLDTHEHAAMAIIQLQGQMVHGRPIKCSW 305
>gi|440635298|gb|ELR05217.1| hypothetical protein GMDG_01655 [Geomyces destructans 20631-21]
Length = 503
Score = 233 bits (594), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 142/335 (42%), Positives = 192/335 (57%), Gaps = 28/335 (8%)
Query: 57 RSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKS-------SYGFIHYFDRRSAAM 109
R++YVG + +VTE +L+++F +TG V+ K+I DK+ +YGF+ Y D +A
Sbjct: 89 RALYVGGLDPRVTEDVLRQIFETTGHVQNVKII-PDKNVGASKGFNYGFVEYDDPGAAER 147
Query: 110 AILSLNGRHLFGQPIKVNWAYASG--QREDTSGHFNIFVGDLSPEVTDATLFACFSVYPS 167
A+ +LNGR + I+VNWAY S +EDTS HF+IFVGDLS EV D L F + S
Sbjct: 148 AMQTLNGRRVHQAEIRVNWAYQSNTSNKEDTSNHFHIFVGDLSNEVNDEVLLQAFCAFGS 207
Query: 168 CSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNED 227
S+ARVMWD KTGRSRG+GFV+FR +QDA+ A++ + G+WLGSR IRCNWA + +
Sbjct: 208 VSEARVMWDMKTGRSRGYGFVAFRERQDAEKALSSMDGEWLGSRAIRCNWANQKGQPSIS 267
Query: 228 KQSSDAKSVVELTNGSSEDGKETTNTEA----PENNPQY-TTVYVGNLAPEVTQLDLHRH 282
+Q S + + T T ++ + PQ+ TTVYVGNL P TQ DL
Sbjct: 268 QQQSMVSTGLTPTTPFGHHHFPTHGVQSYDMIVQQTPQWQTTVYVGNLTPYTTQNDLVPL 327
Query: 283 FHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSY-LFGKQMKCSWGSK- 340
F + G + E R Q D+GF FV+ TH AA+AI S Y + G+ +KCSWG
Sbjct: 328 FQNF--GYVVETRFQSDRGFAFVKMDTHENAAMAI----CQLSGYNVNGRPLKCSWGKDK 381
Query: 341 -PTPPGTSSNPL---PPPAAAP-IPGLSAADLLAY 370
P+ PG P P A P PG +A Y
Sbjct: 382 APSQPGFEGTPTGYSPQSAQTPAYPGTPSAYFPQY 416
>gi|327357360|gb|EGE86217.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Ajellomyces dermatitidis ATCC 18188]
Length = 492
Score = 233 bits (594), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 133/301 (44%), Positives = 181/301 (60%), Gaps = 19/301 (6%)
Query: 57 RSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS----YGFIHYFDRRSAAMAIL 112
R++Y+G + +VTE +L+++F +TG V+ K+I DK+S YGF+ Y D +A A+
Sbjct: 92 RALYIGGLDARVTEDILRQIFETTGHVQSVKII-PDKNSKGLNYGFVEYDDPGAAERAMA 150
Query: 113 SLNGRHLFGQPIKVNWAYASGQ--REDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSD 170
+LNGR + I+VNWAY S +EDTS HF+IFVGDLS EV D L FS + S S+
Sbjct: 151 TLNGRRVHQSEIRVNWAYQSNNSNKEDTSNHFHIFVGDLSNEVNDEVLLQAFSAFGSVSE 210
Query: 171 ARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT-KGAGNNEDKQ 229
ARVMWD KTGRSRG+GFV+FR + DA+ A++ + G+WLGSR IRCNWA KG + +Q
Sbjct: 211 ARVMWDMKTGRSRGYGFVAFRERPDAEKALSSMDGEWLGSRAIRCNWANQKGQPSISQQQ 270
Query: 230 SSDAKSVVELT----NGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHS 285
+ A + T + G ++ + A + TT YVGNL P TQ DL F +
Sbjct: 271 AMAAMGMTPTTPFGHHHFPTHGVQSYDMVAAQTPQWQTTCYVGNLTPYTTQNDLIPLFQN 330
Query: 286 LGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSY-LFGKQMKCSWGSKPTPP 344
G + E R Q D+GF FV+ TH AA+AI S Y + G+ +KCSWG P
Sbjct: 331 F--GYVVETRFQADRGFAFVKMDTHENAAMAI----CQLSGYNVNGRPLKCSWGKDRPPT 384
Query: 345 G 345
G
Sbjct: 385 G 385
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 85/208 (40%), Gaps = 47/208 (22%)
Query: 52 DPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKS----SYGFIHYFDRRSA 107
D S ++VG++ +V + +L + FS+ G V +++ K+ YGF+ + +R A
Sbjct: 177 DTSNHFHIFVGDLSNEVNDEVLLQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRERPDA 236
Query: 108 AMAILSLNGRHLFGQPIKVNWAYASGQREDTS---------------GHFNI-------- 144
A+ S++G L + I+ NWA GQ + GH +
Sbjct: 237 EKALSSMDGEWLGSRAIRCNWANQKGQPSISQQQAMAAMGMTPTTPFGHHHFPTHGVQSY 296
Query: 145 --------------FVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSF 190
+VG+L+P T L F + + R D RGF FV
Sbjct: 297 DMVAAQTPQWQTTCYVGNLTPYTTQNDLIPLFQNFGYVVETRFQAD------RGFAFVKM 350
Query: 191 RNQQDAQSAINDLTGKWLGSRQIRCNWA 218
++A AI L+G + R ++C+W
Sbjct: 351 DTHENAAMAICQLSGYNVNGRPLKCSWG 378
>gi|358059025|dbj|GAA95206.1| hypothetical protein E5Q_01862 [Mixia osmundae IAM 14324]
Length = 352
Score = 233 bits (594), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 126/289 (43%), Positives = 171/289 (59%), Gaps = 17/289 (5%)
Query: 59 VYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKS------SYGFIHYFDRRSAAMAIL 112
+Y+GNI +VTE +LQEVF+ GPV+ K+I D++ +YGF+ ++ + A A+
Sbjct: 14 LYIGNISPRVTEYMLQEVFALAGPVQQVKII-PDRTFQHGGLNYGFVEFYTMQGAEQALQ 72
Query: 113 SLNGRHLFGQPIKVNWAYAS-GQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDA 171
+L GR LF +KVNWAY + +ED + HF++F GDLSPEVTD L FS + S SDA
Sbjct: 73 TLAGRKLFDTEMKVNWAYQNQTAKEDVTNHFHVFCGDLSPEVTDDILQKTFSAFGSLSDA 132
Query: 172 RVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSS 231
RVMWD +G+SRG+GF++FR++ DA++AIN + G+WLGSR IR NWA +
Sbjct: 133 RVMWDMASGKSRGYGFLAFRDRADAEAAINAMNGEWLGSRAIRVNWANQKNQGMMGDGGM 192
Query: 232 DAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVI 291
+G + G N + TTVYVGNL P TQ DL F G G I
Sbjct: 193 GEGPPPPARSGGFQVGGSDYNMVVTQTPVSNTTVYVGNLVPYCTQADLIPLFQ--GYGYI 250
Query: 292 EEVRVQRDKGFGFVRYSTHAEAALAIQM--GNTTQSSYLFGKQMKCSWG 338
E+R+Q D+GF FV+ TH AA+AI G Q G+ +KCSWG
Sbjct: 251 VEIRMQADRGFAFVKLDTHEHAAMAIAYLTGQMCQ-----GRSLKCSWG 294
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 93/204 (45%), Gaps = 41/204 (20%)
Query: 143 NIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRG--FGFVSFRNQQDAQSAI 200
++++G++SP VT+ L F++ +++ D +T + G +GFV F Q A+ A+
Sbjct: 13 HLYIGNISPRVTEYMLQEVFALAGPVQQVKIIPD-RTFQHGGLNYGFVEFYTMQGAEQAL 71
Query: 201 NDLTGKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNP 260
L G+ L +++ NWA + N A E+
Sbjct: 72 QTLAGRKLFDTEMKVNWAYQ-------------------------------NQTAKEDVT 100
Query: 261 QYTTVYVGNLAPEVTQLDLHRHFHSLG----AGVIEEVRVQRDKGFGFVRYSTHAEAALA 316
+ V+ G+L+PEVT L + F + G A V+ ++ + +G+GF+ + A+A A
Sbjct: 101 NHFHVFCGDLSPEVTDDILQKTFSAFGSLSDARVMWDMASGKSRGYGFLAFRDRADAEAA 160
Query: 317 IQMGNTTQSSYLFGKQMKCSWGSK 340
I N +L + ++ +W ++
Sbjct: 161 I---NAMNGEWLGSRAIRVNWANQ 181
>gi|225682885|gb|EEH21169.1| nucleolysin TIA-1 [Paracoccidioides brasiliensis Pb03]
Length = 471
Score = 232 bits (592), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 133/301 (44%), Positives = 180/301 (59%), Gaps = 19/301 (6%)
Query: 57 RSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS----YGFIHYFDRRSAAMAIL 112
R++YVG + +VTE +L+++F +TG V+ K+I DK+S YGF+ Y D +A A+
Sbjct: 100 RALYVGGLDPRVTEDILRQIFETTGHVQSVKII-PDKNSKGLNYGFVEYDDPGAAERAMA 158
Query: 113 SLNGRHLFGQPIKVNWAYASG--QREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSD 170
+LNGR + I+VNWAY S +EDTS HF+IFVGDLS EV D L FS + S S+
Sbjct: 159 TLNGRRVHQSEIRVNWAYQSNSNNKEDTSNHFHIFVGDLSNEVNDEVLLQAFSAFGSVSE 218
Query: 171 ARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT-KGAGNNEDKQ 229
ARVMWD KTGRSRG+GFV+FR + DA+ A++ + G+WLGSR IRCNWA KG + +Q
Sbjct: 219 ARVMWDMKTGRSRGYGFVAFRERSDAEKALSSMDGEWLGSRAIRCNWANQKGQPSISQQQ 278
Query: 230 SSDAKSVVELT----NGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHS 285
+ A + T + G ++ + + TT YVGNL P TQ DL F +
Sbjct: 279 AMAAMGMTPTTPFGHHHFPTHGVQSYDMVVAQTPQWQTTCYVGNLTPYTTQNDLVPLFQN 338
Query: 286 LGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSY-LFGKQMKCSWGSKPTPP 344
G + E R Q D+GF FV+ TH AA+AI S Y + G+ +KCSWG P
Sbjct: 339 F--GYVVETRFQADRGFAFVKMDTHENAAMAI----CQLSGYNVNGRPLKCSWGKDRPPT 392
Query: 345 G 345
G
Sbjct: 393 G 393
>gi|325089595|gb|EGC42905.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Ajellomyces capsulatus H88]
Length = 492
Score = 232 bits (591), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 133/301 (44%), Positives = 181/301 (60%), Gaps = 19/301 (6%)
Query: 57 RSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS----YGFIHYFDRRSAAMAIL 112
R++Y+G + +VTE +L+++F +TG V+ K+I DK+S YGF+ Y D +A A+
Sbjct: 92 RALYIGGLDARVTEDILRQIFETTGHVQSVKII-PDKNSKGLNYGFVEYDDPGAAERAMS 150
Query: 113 SLNGRHLFGQPIKVNWAYASGQ--REDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSD 170
+LNGR + I+VNWAY S +EDTS HF+IFVGDLS EV D L FS + S S+
Sbjct: 151 TLNGRRVHQSEIRVNWAYQSNNNNKEDTSNHFHIFVGDLSNEVNDEVLLQAFSAFGSVSE 210
Query: 171 ARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT-KGAGNNEDKQ 229
ARVMWD KTGRSRG+GFV+FR + DA+ A++ + G+WLGSR IRCNWA KG + +Q
Sbjct: 211 ARVMWDMKTGRSRGYGFVAFRERPDAEKALSSMDGEWLGSRAIRCNWANQKGQPSISQQQ 270
Query: 230 SSDAKSVVELT----NGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHS 285
+ A + T + G ++ + A + TT YVGNL P TQ DL F +
Sbjct: 271 AMAAMGMTPSTPFGHHHFPTHGVQSYDMVAAQTPQWQTTCYVGNLTPYTTQNDLIPLFQN 330
Query: 286 LGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSY-LFGKQMKCSWGSKPTPP 344
G + E R Q D+GF FV+ TH AA+AI S Y + G+ +KCSWG P
Sbjct: 331 F--GYVVETRFQTDRGFAFVKMDTHENAAMAI----CQLSGYNVNGRPLKCSWGRDRPPT 384
Query: 345 G 345
G
Sbjct: 385 G 385
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 85/208 (40%), Gaps = 47/208 (22%)
Query: 52 DPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKS----SYGFIHYFDRRSA 107
D S ++VG++ +V + +L + FS+ G V +++ K+ YGF+ + +R A
Sbjct: 177 DTSNHFHIFVGDLSNEVNDEVLLQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRERPDA 236
Query: 108 AMAILSLNGRHLFGQPIKVNWAYASGQREDTS---------------GHFNI-------- 144
A+ S++G L + I+ NWA GQ + GH +
Sbjct: 237 EKALSSMDGEWLGSRAIRCNWANQKGQPSISQQQAMAAMGMTPSTPFGHHHFPTHGVQSY 296
Query: 145 --------------FVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSF 190
+VG+L+P T L F + + R D RGF FV
Sbjct: 297 DMVAAQTPQWQTTCYVGNLTPYTTQNDLIPLFQNFGYVVETRFQTD------RGFAFVKM 350
Query: 191 RNQQDAQSAINDLTGKWLGSRQIRCNWA 218
++A AI L+G + R ++C+W
Sbjct: 351 DTHENAAMAICQLSGYNVNGRPLKCSWG 378
>gi|164424152|ref|XP_962723.2| hypothetical protein NCU07874 [Neurospora crassa OR74A]
gi|157070397|gb|EAA33487.2| hypothetical protein NCU07874 [Neurospora crassa OR74A]
Length = 480
Score = 232 bits (591), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 146/356 (41%), Positives = 195/356 (54%), Gaps = 32/356 (8%)
Query: 57 RSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKS----SYGFIHYFDRRSAAMAIL 112
R++YVG + +VTE +L+++F +TG V+ K+I DK+ +YGF+ Y D +A A+
Sbjct: 91 RALYVGGLDPRVTEDVLRQIFETTGHVQNVKII-PDKNQKGYNYGFVEYDDPGAAERAMQ 149
Query: 113 SLNGRHLFGQPIKVNWAYASGQ--REDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSD 170
+LNGR + I+VNWAY S +EDTSGHF+IFVGDLS EV D L FS + S S+
Sbjct: 150 TLNGRRVHQSEIRVNWAYQSNNQNKEDTSGHFHIFVGDLSNEVNDEVLLQAFSAFGSVSE 209
Query: 171 ARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQS 230
ARVMWD KTGRSRG+GFV+FR++ DA+ A++ + G+WLGSR IRCNWA N+ Q
Sbjct: 210 ARVMWDMKTGRSRGYGFVAFRDRPDAEKALSSMDGEWLGSRAIRCNWA------NQKGQP 263
Query: 231 SDAKSVVELTNGSSED-----------GKETTNTEAPENNPQYTTVYVGNLAPEVTQLDL 279
S A+ G + G + + + TT YVGNL P TQ DL
Sbjct: 264 SIAQQQAMQQMGLTPTTPYGHHHFPTHGVHSYDMIVAQTPAWQTTCYVGNLTPYTTQNDL 323
Query: 280 HRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGS 339
F + G + E R Q D+GF F++ TH AA+AI N Q + G+ +KCSWG
Sbjct: 324 VPLFQNF--GYVVESRFQADRGFAFIKMDTHENAAMAICQLNGYQ---VNGRPLKCSWGK 378
Query: 340 KPTPPGTSSNPLPP--PAAAPIPGLSAADLLAYERQIAMSKMGGVHALMHPQAQHP 393
TP +P P P +A PG Y S G PQAQ P
Sbjct: 379 DKTPNPQQFDPNQPYSPQSAQTPGYPGTP-STYFNNYGNSYPGQQGNYNGPQAQSP 433
>gi|402218978|gb|EJT99053.1| hypothetical protein DACRYDRAFT_24132 [Dacryopinax sp. DJM-731 SS1]
Length = 474
Score = 232 bits (591), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 139/355 (39%), Positives = 192/355 (54%), Gaps = 58/355 (16%)
Query: 59 VYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKS------SYGFIHYFDRRSAAMAIL 112
+YVGN+ +VTE +L E+F+ GPV+ K+I D++ +YGF+ Y D RSA A+
Sbjct: 14 LYVGNLSPRVTEYMLTEIFAVAGPVQHVKII-PDRNYQHGGLNYGFVEYTDMRSAETALQ 72
Query: 113 SLNGRHLFGQPIKVNWAYASGQ-REDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDA 171
+LNGR +F I+VNWAY Q +EDTSGH+++FVGDLSPEV D L F+ +P+ SDA
Sbjct: 73 TLNGRKIFDTEIRVNWAYQGQQNKEDTSGHYHVFVGDLSPEVNDEVLAKAFAAFPTMSDA 132
Query: 172 RVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWA---TKGAGNNEDK 228
RVMWD +G+SRG+GF++FR++ DA+ AI + G+WLGSR IR NWA T+GA N
Sbjct: 133 RVMWDMNSGKSRGYGFLAFRDKTDAEQAIATMNGEWLGSRAIRVNWANQKTQGAPGNGGM 192
Query: 229 QSSDAKSVVE---------------------------------LTNGSSEDGKETTNTEA 255
+ ++ ++ E T++
Sbjct: 193 PGIGGGMGMGGGMPTGMPMGMPMGGMPAMSPMGAARPMGMPQPVSFQTAPVSYEQVLTQS 252
Query: 256 PENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAAL 315
P N +TVYVGNL P TQ DL F S+G + E+R+Q D+GF FV+ TH AA
Sbjct: 253 PATN---STVYVGNLVPFATQADLIPLFQSIG--YLSEIRMQADRGFAFVKLDTHENAAT 307
Query: 316 AIQMGNTTQSSYLFGKQMKCSWGSK------PTPPGTSSNPLPPPAAAPIPGLSA 364
AI + Q + G+ +K SWG TP S P A A PG +A
Sbjct: 308 AIV---SLQGQMIHGRPIKVSWGKDRNAGEGATPQAASGGTGSPAAVAASPGGAA 359
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 96/207 (46%), Gaps = 43/207 (20%)
Query: 143 NIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRS-RGFGFVSFRNQQDAQSAIN 201
+++VG+LSP VT+ L F+V +++ D+ +GFV + + + A++A+
Sbjct: 13 HLYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDRNYQHGGLNYGFVEYTDMRSAETALQ 72
Query: 202 DLTGKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQ 261
L G+ + +IR NWA +G N ED T+G
Sbjct: 73 TLNGRKIFDTEIRVNWAYQGQQNKED------------TSG------------------- 101
Query: 262 YTTVYVGNLAPEVTQLDLHRHFHSL----GAGVIEEVRVQRDKGFGFV--RYSTHAEAAL 315
+ V+VG+L+PEV L + F + A V+ ++ + +G+GF+ R T AE A+
Sbjct: 102 HYHVFVGDLSPEVNDEVLAKAFAAFPTMSDARVMWDMNSGKSRGYGFLAFRDKTDAEQAI 161
Query: 316 AIQMGNTTQSSYLFGKQMKCSWGSKPT 342
A T +L + ++ +W ++ T
Sbjct: 162 A-----TMNGEWLGSRAIRVNWANQKT 183
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 45/76 (59%), Gaps = 2/76 (2%)
Query: 53 PSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSSYGFIHYFDRRSAAMAIL 112
P+T +VYVGN+ T+ L +F S G + ++ + D+ + F+ +AA AI+
Sbjct: 253 PATNSTVYVGNLVPFATQADLIPLFQSIGYLSEIRM-QADRG-FAFVKLDTHENAATAIV 310
Query: 113 SLNGRHLFGQPIKVNW 128
SL G+ + G+PIKV+W
Sbjct: 311 SLQGQMIHGRPIKVSW 326
Score = 46.2 bits (108), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 44/82 (53%), Gaps = 4/82 (4%)
Query: 52 DPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS----YGFIHYFDRRSA 107
D S V+VG++ +V + +L + F++ + +++ S YGF+ + D+ A
Sbjct: 98 DTSGHYHVFVGDLSPEVNDEVLAKAFAAFPTMSDARVMWDMNSGKSRGYGFLAFRDKTDA 157
Query: 108 AMAILSLNGRHLFGQPIKVNWA 129
AI ++NG L + I+VNWA
Sbjct: 158 EQAIATMNGEWLGSRAIRVNWA 179
Score = 42.0 bits (97), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 44/90 (48%), Gaps = 12/90 (13%)
Query: 255 APENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDK-------GFGFVRY 307
+P P+ +YVGNL+P VT+ L F AG ++ V++ D+ +GFV Y
Sbjct: 4 SPAQAPRRAHLYVGNLSPRVTEYMLTEIFAV--AGPVQHVKIIPDRNYQHGGLNYGFVEY 61
Query: 308 STHAEAALAIQMGNTTQSSYLFGKQMKCSW 337
+ A A+Q T +F +++ +W
Sbjct: 62 TDMRSAETALQ---TLNGRKIFDTEIRVNW 88
>gi|405119959|gb|AFR94730.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Cryptococcus neoformans var. grubii H99]
Length = 434
Score = 232 bits (591), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 130/313 (41%), Positives = 177/313 (56%), Gaps = 42/313 (13%)
Query: 59 VYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKS------SYGFIHYFDRRSAAMAIL 112
+YVGN+ +VT+ +L E+F+ GPV K+I +D++ +YGF+ Y D RSA A+
Sbjct: 24 LYVGNLSPRVTDYILTEIFAVAGPVVSAKII-QDRNFQHGGFNYGFVEYADMRSADQALT 82
Query: 113 SLNGRHLFGQPIKVNWAYASGQ-REDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDA 171
+LNGR +F I+VNWAY Q +EDT H+++FVGDLSPEV D L F + S S+A
Sbjct: 83 TLNGRKIFDAEIRVNWAYQGNQNKEDTQHHYHVFVGDLSPEVNDDVLSKAFGAFGSLSEA 142
Query: 172 RVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSS 231
RVMWD +G+SRG+GF+SFR++ DA+ AI + G+WLGSR IR NWA + +
Sbjct: 143 RVMWDMNSGKSRGYGFLSFRDKADAEQAIASMNGEWLGSRAIRVNWANQKTQTGGTRTGG 202
Query: 232 DAKSVVELTNGS--------------------------SEDGKETTNTEAPENNPQYTTV 265
S + G+ + ET ++ PE N TTV
Sbjct: 203 ATPSYSAPSMGAPPAPAGIPSAYGAPVPGVVPGVGVGGAVGSYETVASQTPEFN---TTV 259
Query: 266 YVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQS 325
YVGNL P TQ DL F G G I E+R+Q D+GF FV+ TH AALAI Q+
Sbjct: 260 YVGNLIPYTTQADLIPLFQ--GYGYIVEIRMQADRGFAFVKLDTHQNAALAI---THLQN 314
Query: 326 SYLFGKQMKCSWG 338
+ G+ +KCSWG
Sbjct: 315 QLVHGRPIKCSWG 327
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 95/215 (44%), Gaps = 43/215 (20%)
Query: 133 GQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSR-GFGFVSFR 191
GQ + +++VG+LSP VTD L F+V A+++ D+ +GFV +
Sbjct: 13 GQSAEAPKRPHLYVGNLSPRVTDYILTEIFAVAGPVVSAKIIQDRNFQHGGFNYGFVEYA 72
Query: 192 NQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETT 251
+ + A A+ L G+ + +IR NWA +G N ED Q
Sbjct: 73 DMRSADQALTTLNGRKIFDAEIRVNWAYQGNQNKEDTQ---------------------- 110
Query: 252 NTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRD------KGFGFV 305
+ V+VG+L+PEV L + F + G+ + E RV D +G+GF+
Sbjct: 111 ---------HHYHVFVGDLSPEVNDDVLSKAFGAFGS--LSEARVMWDMNSGKSRGYGFL 159
Query: 306 RYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSK 340
+ A+A AI N +L + ++ +W ++
Sbjct: 160 SFRDKADAEQAIASMN---GEWLGSRAIRVNWANQ 191
>gi|303314025|ref|XP_003067021.1| oligouridylate binding protein ,putative [Coccidioides posadasii
C735 delta SOWgp]
gi|240106689|gb|EER24876.1| oligouridylate binding protein ,putative [Coccidioides posadasii
C735 delta SOWgp]
gi|320039295|gb|EFW21229.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Coccidioides posadasii str. Silveira]
Length = 483
Score = 231 bits (590), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 134/301 (44%), Positives = 182/301 (60%), Gaps = 19/301 (6%)
Query: 57 RSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS----YGFIHYFDRRSAAMAIL 112
R++YVG + +VTE +L+++F +TG V+ K+I DK+S YGF+ Y D +A A+
Sbjct: 92 RALYVGGLDPRVTEDILRQIFETTGHVQSVKII-PDKNSKGLNYGFVEYDDPGAAERAMQ 150
Query: 113 SLNGRHLFGQPIKVNWAYAS--GQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSD 170
+LNGR + I+VNWAY S +EDTS HF+IFVGDLS EV D L FS + S S+
Sbjct: 151 TLNGRRVHQSEIRVNWAYQSNNANKEDTSNHFHIFVGDLSNEVNDEVLLQAFSAFGSVSE 210
Query: 171 ARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT-KGAGNNEDKQ 229
ARVMWD KTGRSRG+GFV+FR + DA+ A++ + G+WLGSR IRCNWA KG + +Q
Sbjct: 211 ARVMWDMKTGRSRGYGFVAFRERADAEKALSSMDGEWLGSRAIRCNWANQKGQPSISQQQ 270
Query: 230 SSDAKSVVELT----NGSSEDGKETTNTEAPENNPQY-TTVYVGNLAPEVTQLDLHRHFH 284
+ A + T + G ++ + + PQ+ TT YVGNL P TQ DL F
Sbjct: 271 AMAAMGMTPTTPFGHHHFPTHGVQSYDMVV-QQTPQWQTTCYVGNLTPYTTQNDLVPLFQ 329
Query: 285 SLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSKPTPP 344
+ G + E R Q D+GF FV+ TH AA+AI N + G+ +KCSWG P
Sbjct: 330 NF--GYVVETRFQADRGFAFVKMDTHENAAMAICQLNGYN---VNGRPLKCSWGKDRPPT 384
Query: 345 G 345
G
Sbjct: 385 G 385
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 84/208 (40%), Gaps = 47/208 (22%)
Query: 52 DPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKS----SYGFIHYFDRRSA 107
D S ++VG++ +V + +L + FS+ G V +++ K+ YGF+ + +R A
Sbjct: 177 DTSNHFHIFVGDLSNEVNDEVLLQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRERADA 236
Query: 108 AMAILSLNGRHLFGQPIKVNWAYASGQREDTS---------------GHFNI-------- 144
A+ S++G L + I+ NWA GQ + GH +
Sbjct: 237 EKALSSMDGEWLGSRAIRCNWANQKGQPSISQQQAMAAMGMTPTTPFGHHHFPTHGVQSY 296
Query: 145 --------------FVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSF 190
+VG+L+P T L F + + R D RGF FV
Sbjct: 297 DMVVQQTPQWQTTCYVGNLTPYTTQNDLVPLFQNFGYVVETRFQAD------RGFAFVKM 350
Query: 191 RNQQDAQSAINDLTGKWLGSRQIRCNWA 218
++A AI L G + R ++C+W
Sbjct: 351 DTHENAAMAICQLNGYNVNGRPLKCSWG 378
>gi|347839348|emb|CCD53920.1| similar to nuclear and cytoplasmic polyadenylated RNA-binding
protein pub1 [Botryotinia fuckeliana]
Length = 506
Score = 231 bits (589), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 146/359 (40%), Positives = 199/359 (55%), Gaps = 34/359 (9%)
Query: 57 RSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKS---------SYGFIHYFDRRSA 107
R++YVG + +VTE +L+++F +TG V+ K+I DK+ +YGF+ Y D +A
Sbjct: 89 RALYVGGLDPRVTEEILRQIFETTGHVQNVKII-PDKNVGAVQSKGFNYGFVEYDDPGAA 147
Query: 108 AMAILSLNGRHLFGQPIKVNWAYASG--QREDTSGHFNIFVGDLSPEVTDATLFACFSVY 165
A+ +LNGR + I+VNWAY S +EDTS HF+IFVGDLS EV D L FS +
Sbjct: 148 ERAMQTLNGRRVHQAEIRVNWAYQSNTSNKEDTSNHFHIFVGDLSNEVNDEVLLQAFSAF 207
Query: 166 PSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT-KGAGN 224
S S+ARVMWD KTGRSRG+GF +FR +QDA+ A++ + G+WLGSR IRCNWA KG +
Sbjct: 208 GSVSEARVMWDMKTGRSRGYGFAAFRERQDAEKALSSMDGEWLGSRAIRCNWANQKGQPS 267
Query: 225 NEDKQSSDAKSVVELT----NGSSEDGKETTNTEAPENNPQY-TTVYVGNLAPEVTQLDL 279
+Q+ A + T + G ++ + + PQ+ TT YVGNL P TQ DL
Sbjct: 268 ISQQQAMSAMGMTPTTPFGHHHFPTHGVQSYDMIV-QQTPQWQTTCYVGNLTPYTTQQDL 326
Query: 280 HRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSY-LFGKQMKCSWG 338
F + G + E R Q D+GF FV+ +H AALAI S Y + G+ +KCSWG
Sbjct: 327 VPLFQNF--GYVVETRFQSDRGFAFVKMDSHENAALAI----CQLSGYNVNGRPLKCSWG 380
Query: 339 SKPTPPGT---SSNPLPPPAAAPIPGLSAADLLAYERQIAMSKMGGVHALMHPQAQHPL 394
P S P A P PG AY + GG+ PQ+ P+
Sbjct: 381 KDKAPTSAGFDGSQQSYSPQAGPTPGGFPGTPNAY-----FPQYGGMPPQAGPQSAGPM 434
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 87/212 (41%), Gaps = 47/212 (22%)
Query: 52 DPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKS----SYGFIHYFDRRSA 107
D S ++VG++ +V + +L + FS+ G V +++ K+ YGF + +R+ A
Sbjct: 179 DTSNHFHIFVGDLSNEVNDEVLLQAFSAFGSVSEARVMWDMKTGRSRGYGFAAFRERQDA 238
Query: 108 AMAILSLNGRHLFGQPIKVNWAYASGQREDTS---------------GHFNI-------- 144
A+ S++G L + I+ NWA GQ + GH +
Sbjct: 239 EKALSSMDGEWLGSRAIRCNWANQKGQPSISQQQAMSAMGMTPTTPFGHHHFPTHGVQSY 298
Query: 145 --------------FVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSF 190
+VG+L+P T L F + + R D RGF FV
Sbjct: 299 DMIVQQTPQWQTTCYVGNLTPYTTQQDLVPLFQNFGYVVETRFQSD------RGFAFVKM 352
Query: 191 RNQQDAQSAINDLTGKWLGSRQIRCNWATKGA 222
+ ++A AI L+G + R ++C+W A
Sbjct: 353 DSHENAALAICQLSGYNVNGRPLKCSWGKDKA 384
>gi|302694831|ref|XP_003037094.1| hypothetical protein SCHCODRAFT_84062 [Schizophyllum commune H4-8]
gi|300110791|gb|EFJ02192.1| hypothetical protein SCHCODRAFT_84062 [Schizophyllum commune H4-8]
Length = 435
Score = 231 bits (588), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 127/309 (41%), Positives = 178/309 (57%), Gaps = 40/309 (12%)
Query: 59 VYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKS------SYGFIHYFDRRSAAMAIL 112
+YVGN+ +VTE +L E+F+ GPV+ K+I D++ +YGF+ Y D R+A A+
Sbjct: 18 LYVGNLSPRVTEYMLTEIFAVAGPVQHVKII-PDRNYQHGGLNYGFVEYLDMRAAETALQ 76
Query: 113 SLNGRHLFGQPIKVNWAYASGQ-REDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDA 171
+LNGR +F I+VNWAY Q +EDT+ H+++FVGDLSPEV D L FS + + SDA
Sbjct: 77 TLNGRRIFDTEIRVNWAYQGQQNKEDTTNHYHVFVGDLSPEVNDDVLAKAFSAFGTLSDA 136
Query: 172 RVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQ-- 229
RVMWD +G+SRG+GF++FR++ DA+ AI + G+WLGSR IR NWA + +
Sbjct: 137 RVMWDMNSGKSRGYGFLAFRDKTDAEQAIATMNGEWLGSRAIRVNWANQKTQGSLGGGGG 196
Query: 230 --------------------SSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGN 269
+ A + + L G E T+ P N TTVYVGN
Sbjct: 197 GGGPVGSPIGGPPAMARPMGAGGAPAPMNLAGGPLS--YEQVLTQTPAYN---TTVYVGN 251
Query: 270 LAPEVTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLF 329
L P TQ DL F ++ G + E+R+Q D+GF FV+ TH AA+AI Q +
Sbjct: 252 LVPYCTQADLIPLFQTI--GYLSEIRMQADRGFAFVKLDTHEHAAMAIVQ---LQGQMVH 306
Query: 330 GKQMKCSWG 338
G+ +KCSWG
Sbjct: 307 GRPIKCSWG 315
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 95/205 (46%), Gaps = 39/205 (19%)
Query: 143 NIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGR-SRGFGFVSFRNQQDAQSAIN 201
+++VG+LSP VT+ L F+V +++ D+ +GFV + + + A++A+
Sbjct: 17 HLYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDRNYQHGGLNYGFVEYLDMRAAETALQ 76
Query: 202 DLTGKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQ 261
L G+ + +IR NWA +G N ED TTN
Sbjct: 77 TLNGRRIFDTEIRVNWAYQGQQNKED----------------------TTN--------- 105
Query: 262 YTTVYVGNLAPEVTQLDLHRHFHSLG----AGVIEEVRVQRDKGFGFVRYSTHAEAALAI 317
+ V+VG+L+PEV L + F + G A V+ ++ + +G+GF+ + +A AI
Sbjct: 106 HYHVFVGDLSPEVNDDVLAKAFSAFGTLSDARVMWDMNSGKSRGYGFLAFRDKTDAEQAI 165
Query: 318 QMGNTTQSSYLFGKQMKCSWGSKPT 342
T +L + ++ +W ++ T
Sbjct: 166 A---TMNGEWLGSRAIRVNWANQKT 187
Score = 43.1 bits (100), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 40/76 (52%), Gaps = 2/76 (2%)
Query: 53 PSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSSYGFIHYFDRRSAAMAIL 112
P+ +VYVGN+ T+ L +F + G + ++ + + F+ AAMAI+
Sbjct: 241 PAYNTTVYVGNLVPYCTQADLIPLFQTIGYLSEIRM--QADRGFAFVKLDTHEHAAMAIV 298
Query: 113 SLNGRHLFGQPIKVNW 128
L G+ + G+PIK +W
Sbjct: 299 QLQGQMVHGRPIKCSW 314
>gi|398407815|ref|XP_003855373.1| hypothetical protein MYCGRDRAFT_35430 [Zymoseptoria tritici IPO323]
gi|339475257|gb|EGP90349.1| hypothetical protein MYCGRDRAFT_35430 [Zymoseptoria tritici IPO323]
Length = 401
Score = 231 bits (588), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 132/303 (43%), Positives = 181/303 (59%), Gaps = 20/303 (6%)
Query: 57 RSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKS------SYGFIHYFDRRSAAMA 110
R++YVG + +VTE +L+++F +TG V+ K+I DK+ +YGF+ Y D +A A
Sbjct: 69 RALYVGGLDPRVTEDVLKQIFETTGHVQNVKII-PDKNFQSKGFNYGFVEYDDPGAAERA 127
Query: 111 ILSLNGRHLFGQPIKVNWAYASG--QREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSC 168
+ +LNGR + Q I+VNWAY S +EDTS HF+IFVGDLS EV D L FS + +
Sbjct: 128 MQTLNGRRVHQQEIRVNWAYQSNTTSKEDTSNHFHIFVGDLSNEVNDEVLLQAFSAFGTV 187
Query: 169 SDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT-KGAGNNED 227
S+ARVMWD KTGRSRG+GFV+FR++ DA+ A++ + G+WLGSR IRCNWA KG +
Sbjct: 188 SEARVMWDMKTGRSRGYGFVAFRDRADAEKALSSMDGEWLGSRAIRCNWANQKGQPSFSQ 247
Query: 228 KQSSDAKSVVELTNGSSEDGKETTNTEAPE----NNPQY-TTVYVGNLAPEVTQLDLHRH 282
+Q+ + T T ++ E PQ+ TT YVGNL P TQ DL
Sbjct: 248 QQAMVQMGMTPTTPYGGHHSFPTQGAQSYEMIVQQTPQWQTTCYVGNLTPYTTQNDLVPL 307
Query: 283 FHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSKPT 342
F + G + E R Q D+GF F++ TH AA AI + Q + G+ +KCSWG
Sbjct: 308 FQNF--GYVTETRFQSDRGFAFIKMDTHENAANAICQLSGYQVN---GRPLKCSWGKDRP 362
Query: 343 PPG 345
P G
Sbjct: 363 PTG 365
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 87/208 (41%), Gaps = 48/208 (23%)
Query: 52 DPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKS----SYGFIHYFDRRSA 107
D S ++VG++ +V + +L + FS+ G V +++ K+ YGF+ + DR A
Sbjct: 156 DTSNHFHIFVGDLSNEVNDEVLLQAFSAFGTVSEARVMWDMKTGRSRGYGFVAFRDRADA 215
Query: 108 AMAILSLNGRHLFGQPIKVNWAYASGQREDT----------------SGHFNI------- 144
A+ S++G L + I+ NWA GQ + GH +
Sbjct: 216 EKALSSMDGEWLGSRAIRCNWANQKGQPSFSQQQAMVQMGMTPTTPYGGHHSFPTQGAQS 275
Query: 145 ---------------FVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVS 189
+VG+L+P T L F + ++ R D RGF F+
Sbjct: 276 YEMIVQQTPQWQTTCYVGNLTPYTTQNDLVPLFQNFGYVTETRFQSD------RGFAFIK 329
Query: 190 FRNQQDAQSAINDLTGKWLGSRQIRCNW 217
++A +AI L+G + R ++C+W
Sbjct: 330 MDTHENAANAICQLSGYQVNGRPLKCSW 357
>gi|393248198|gb|EJD55705.1| RNA-binding domain-containing protein [Auricularia delicata
TFB-10046 SS5]
Length = 426
Score = 231 bits (588), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 135/338 (39%), Positives = 182/338 (53%), Gaps = 47/338 (13%)
Query: 59 VYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKS------SYGFIHYFDRRSAAMAIL 112
+YVGN+ +VTE +L E+F+ GPV+ K+I D++ +YGF+ Y D R+A A+
Sbjct: 8 LYVGNLSPRVTEYMLTEIFAVAGPVQHVKII-PDRNYQHGGLNYGFVEYMDMRAAETALQ 66
Query: 113 SLNGRHLFGQPIKVNWAYASGQ-REDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDA 171
+LNGR +F I+VNWAY Q +EDTS HF++FVGDLSPEV+D L FS + + SDA
Sbjct: 67 TLNGRKIFDTEIRVNWAYQGSQNKEDTSNHFHVFVGDLSPEVSDEVLGKAFSAFGTLSDA 126
Query: 172 RVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATK----------- 220
RVMWD +G+SRG+GF++FR++ DA+ AI + G+WLGSR IR NWA +
Sbjct: 127 RVMWDMNSGKSRGYGFLAFRDKTDAEQAIATMNGEWLGSRAIRVNWANQKTMGGAPVTGG 186
Query: 221 -------------------GAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQ 261
G + A + + G E + P N
Sbjct: 187 GGPPMGGMGGGMGGGVGGIRMGGPPMAGAGGAPASINFAPGGGPLSFEQVVAQTPAYN-- 244
Query: 262 YTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGN 321
TTVYVGNL P TQ DL F G G I E+R+Q D+GF FV+ TH AALAI
Sbjct: 245 -TTVYVGNLVPYTTQADLIPLFQ--GIGYISEIRMQADRGFAFVKLDTHEHAALAIVQ-- 299
Query: 322 TTQSSYLFGKQMKCSWGSKPTPPGTSS-NPLPPPAAAP 358
Q + G+ +KCSWG T + +P P P
Sbjct: 300 -LQGQLVHGRPIKCSWGKDRASGETGTMSPTSPAGVTP 336
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 99/207 (47%), Gaps = 43/207 (20%)
Query: 143 NIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRS-RGFGFVSFRNQQDAQSAIN 201
+++VG+LSP VT+ L F+V +++ D+ +GFV + + + A++A+
Sbjct: 7 HLYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDRNYQHGGLNYGFVEYMDMRAAETALQ 66
Query: 202 DLTGKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQ 261
L G+ + +IR NWA +G+ N ED T+N
Sbjct: 67 TLNGRKIFDTEIRVNWAYQGSQNKED----------------------TSN--------- 95
Query: 262 YTTVYVGNLAPEVTQLDLHRHFHSLG----AGVIEEVRVQRDKGFGFV--RYSTHAEAAL 315
+ V+VG+L+PEV+ L + F + G A V+ ++ + +G+GF+ R T AE A+
Sbjct: 96 HFHVFVGDLSPEVSDEVLGKAFSAFGTLSDARVMWDMNSGKSRGYGFLAFRDKTDAEQAI 155
Query: 316 AIQMGNTTQSSYLFGKQMKCSWGSKPT 342
A T +L + ++ +W ++ T
Sbjct: 156 A-----TMNGEWLGSRAIRVNWANQKT 177
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 46/82 (56%), Gaps = 4/82 (4%)
Query: 52 DPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKS----SYGFIHYFDRRSA 107
D S V+VG++ +V++ +L + FS+ G + +++ S YGF+ + D+ A
Sbjct: 92 DTSNHFHVFVGDLSPEVSDEVLGKAFSAFGTLSDARVMWDMNSGKSRGYGFLAFRDKTDA 151
Query: 108 AMAILSLNGRHLFGQPIKVNWA 129
AI ++NG L + I+VNWA
Sbjct: 152 EQAIATMNGEWLGSRAIRVNWA 173
Score = 41.6 bits (96), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 39/77 (50%), Gaps = 2/77 (2%)
Query: 53 PSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSSYGFIHYFDRRSAAMAIL 112
P+ +VYVGN+ T+ L +F G + ++ + + F+ AA+AI+
Sbjct: 241 PAYNTTVYVGNLVPYTTQADLIPLFQGIGYISEIRM--QADRGFAFVKLDTHEHAALAIV 298
Query: 113 SLNGRHLFGQPIKVNWA 129
L G+ + G+PIK +W
Sbjct: 299 QLQGQLVHGRPIKCSWG 315
>gi|452845910|gb|EME47843.1| hypothetical protein DOTSEDRAFT_167231 [Dothistroma septosporum
NZE10]
Length = 500
Score = 231 bits (588), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 131/303 (43%), Positives = 183/303 (60%), Gaps = 21/303 (6%)
Query: 57 RSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKS------SYGFIHYFDRRSAAMA 110
R++YVG + +VTE +L+++F +TG V+ K+I DK+ +YGF+ Y D +A A
Sbjct: 83 RALYVGGLDPRVTEDVLKQIFETTGHVQNVKII-PDKNFQSKGYNYGFVEYDDPGAAERA 141
Query: 111 ILSLNGRHLFGQPIKVNWAYASGQ--REDTSGHFNIFVGDLSPEVTDATLFACFSVYPSC 168
+ +LNGR + Q I+VNWAY S +EDTS HF+IFVGDLS EV D L FS + +
Sbjct: 142 MQTLNGRRVHQQEIRVNWAYQSNTNTKEDTSNHFHIFVGDLSNEVNDEVLLQAFSAFGTV 201
Query: 169 SDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDK 228
S+ARVMWD KTGRSRG+GFV++R++ +A+ A++ + G+WLGSR IRCNWA + + +
Sbjct: 202 SEARVMWDMKTGRSRGYGFVAYRDRGEAEKALSSMDGEWLGSRAIRCNWANQKGQPSFSQ 261
Query: 229 QSSDAKSVVELTNGSSEDGKETTNTEAPE----NNPQY-TTVYVGNLAPEVTQLDLHRHF 283
Q + A+ + T T +++ E PQ+ TT YVGNL P TQ DL F
Sbjct: 262 QQAMAQMGMTPTTPYGHHTFPTQGSQSYEMVVNQTPQWQTTCYVGNLTPYTTQNDLVPLF 321
Query: 284 HSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSY-LFGKQMKCSWGSKPT 342
+ G + E R Q D+GF FV+ TH AA AI S Y + G+ +KCSWG
Sbjct: 322 QNF--GYVTETRFQSDRGFAFVKMDTHENAANAI----CQLSGYNVNGRPLKCSWGKDRP 375
Query: 343 PPG 345
P G
Sbjct: 376 PTG 378
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 86/208 (41%), Gaps = 47/208 (22%)
Query: 52 DPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKS----SYGFIHYFDRRSA 107
D S ++VG++ +V + +L + FS+ G V +++ K+ YGF+ Y DR A
Sbjct: 170 DTSNHFHIFVGDLSNEVNDEVLLQAFSAFGTVSEARVMWDMKTGRSRGYGFVAYRDRGEA 229
Query: 108 AMAILSLNGRHLFGQPIKVNWAYASGQREDTS---------------GHFNI-------- 144
A+ S++G L + I+ NWA GQ + GH
Sbjct: 230 EKALSSMDGEWLGSRAIRCNWANQKGQPSFSQQQAMAQMGMTPTTPYGHHTFPTQGSQSY 289
Query: 145 --------------FVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSF 190
+VG+L+P T L F + ++ R D RGF FV
Sbjct: 290 EMVVNQTPQWQTTCYVGNLTPYTTQNDLVPLFQNFGYVTETRFQSD------RGFAFVKM 343
Query: 191 RNQQDAQSAINDLTGKWLGSRQIRCNWA 218
++A +AI L+G + R ++C+W
Sbjct: 344 DTHENAANAICQLSGYNVNGRPLKCSWG 371
>gi|321262697|ref|XP_003196067.1| non-translatable mRNA -binding protein [Cryptococcus gattii WM276]
gi|317462542|gb|ADV24280.1| Non-translatable mRNA -binding protein, putative [Cryptococcus
gattii WM276]
Length = 434
Score = 231 bits (588), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 130/313 (41%), Positives = 176/313 (56%), Gaps = 42/313 (13%)
Query: 59 VYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKS------SYGFIHYFDRRSAAMAIL 112
+YVGN+ +VT+ +L E+F+ GPV K+I +D++ +YGF+ Y D RSA A+
Sbjct: 24 LYVGNLSPRVTDYILTEIFAVAGPVVSAKII-QDRNFQHGGFNYGFVEYADMRSAEQALT 82
Query: 113 SLNGRHLFGQPIKVNWAYASGQ-REDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDA 171
+LNGR +F I+VNWAY Q +EDT H+++FVGDLSPEV D L F + S S+A
Sbjct: 83 TLNGRKIFDAEIRVNWAYQGNQNKEDTQHHYHVFVGDLSPEVNDDVLSKAFGAFGSLSEA 142
Query: 172 RVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSS 231
RVMWD +G+SRG+GF+SFR++ DA+ AI + G+WLGSR IR NWA + +
Sbjct: 143 RVMWDMNSGKSRGYGFLSFRDKADAEQAIASMNGEWLGSRAIRVNWANQKTQTGGTRTGG 202
Query: 232 DAKSVVELTNGS--------------------------SEDGKETTNTEAPENNPQYTTV 265
S G+ + ET ++ PE N TTV
Sbjct: 203 GTPSYSAPPMGAPPVPAGVPSAYGAAAPGVVPGVGVGGAVGSFETVASQTPEFN---TTV 259
Query: 266 YVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQS 325
YVGNL P TQ DL F G G I E+R+Q D+GF FV+ TH AALAI Q+
Sbjct: 260 YVGNLIPYTTQADLIPLFQ--GYGYIVEIRMQADRGFAFVKLDTHQNAALAI---THLQN 314
Query: 326 SYLFGKQMKCSWG 338
+ G+ +KCSWG
Sbjct: 315 QLVHGRPIKCSWG 327
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 108/249 (43%), Gaps = 50/249 (20%)
Query: 126 VNWAYASGQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSR-G 184
V + GQ + +++VG+LSP VTD L F+V A+++ D+
Sbjct: 6 VQYGITPGQSAEAPKRPHLYVGNLSPRVTDYILTEIFAVAGPVVSAKIIQDRNFQHGGFN 65
Query: 185 FGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSS 244
+GFV + + + A+ A+ L G+ + +IR NWA +G N ED Q
Sbjct: 66 YGFVEYADMRSAEQALTTLNGRKIFDAEIRVNWAYQGNQNKEDTQ--------------- 110
Query: 245 EDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRD----- 299
+ V+VG+L+PEV L + F + G+ + E RV D
Sbjct: 111 ----------------HHYHVFVGDLSPEVNDDVLSKAFGAFGS--LSEARVMWDMNSGK 152
Query: 300 -KGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSKPTPPGTS-------SNPL 351
+G+GF+ + A+A AI N +L + ++ +W ++ T G + S
Sbjct: 153 SRGYGFLSFRDKADAEQAIASMN---GEWLGSRAIRVNWANQKTQTGGTRTGGGTPSYSA 209
Query: 352 PPPAAAPIP 360
PP A P+P
Sbjct: 210 PPMGAPPVP 218
Score = 39.3 bits (90), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 40/84 (47%), Gaps = 2/84 (2%)
Query: 53 PSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSSYGFIHYFDRRSAAMAIL 112
P +VYVGN+ T+ L +F G + ++ + + F+ ++AA+AI
Sbjct: 253 PEFNTTVYVGNLIPYTTQADLIPLFQGYGYIVEIRM--QADRGFAFVKLDTHQNAALAIT 310
Query: 113 SLNGRHLFGQPIKVNWAYASGQRE 136
L + + G+PIK +W G E
Sbjct: 311 HLQNQLVHGRPIKCSWGKDKGSME 334
>gi|451847206|gb|EMD60514.1| hypothetical protein COCSADRAFT_29739 [Cochliobolus sativus ND90Pr]
Length = 506
Score = 230 bits (587), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 127/306 (41%), Positives = 176/306 (57%), Gaps = 22/306 (7%)
Query: 57 RSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS----------YGFIHYFDRRS 106
R++YVG + +VTE +L+++F +TG V+ K+I +S YGF+ Y D +
Sbjct: 84 RALYVGGLDPRVTEDVLRQIFETTGHVQSVKIIPDKTASSPSFNSKGFNYGFVEYDDPGA 143
Query: 107 AAMAILSLNGRHLFGQPIKVNWAYASGQ--REDTSGHFNIFVGDLSPEVTDATLFACFSV 164
A + +LNGR + I+VNWAY S +EDTS HF+IFVGDLS EV D L FS
Sbjct: 144 AERGMATLNGRRIHNNEIRVNWAYQSNNTAKEDTSNHFHIFVGDLSNEVNDEVLLQAFST 203
Query: 165 YPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGN 224
+ S+ARVMWD KTGRSRG+GFV+FR++ DA+ A+N + G+WLGSR IRCNWA +
Sbjct: 204 FGPVSEARVMWDMKTGRSRGYGFVAFRDRADAERALNSMDGEWLGSRAIRCNWANQKGQP 263
Query: 225 NEDKQSSDAKSVVELTNGSSEDGKETTNTEAPE----NNPQY-TTVYVGNLAPEVTQLDL 279
+ +Q + A + T T ++ + PQ+ TT YVGNL P +Q DL
Sbjct: 264 SISQQQAMASMGMTPTTPFGHHHFPTHGVQSYDMVVAQTPQWQTTCYVGNLTPYTSQADL 323
Query: 280 HRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGS 339
F + G + E R Q D+GF F++ TH AA+AI N + G+ +KCSWG
Sbjct: 324 VPLFQNF--GYVTETRFQSDRGFAFIKMDTHENAAMAICQLNGYN---VNGRPLKCSWGK 378
Query: 340 KPTPPG 345
P G
Sbjct: 379 DRPPTG 384
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 93/214 (43%), Gaps = 43/214 (20%)
Query: 144 IFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTG----RSRGF--GFVSFRNQQDAQ 197
++VG L P VT+ L F +++ D+ S+GF GFV + + A+
Sbjct: 86 LYVGGLDPRVTEDVLRQIFETTGHVQSVKIIPDKTASSPSFNSKGFNYGFVEYDDPGAAE 145
Query: 198 SAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPE 257
+ L G+ + + +IR NWA + +N A E
Sbjct: 146 RGMATLNGRRIHNNEIRVNWAYQ------------------------------SNNTAKE 175
Query: 258 NNPQYTTVYVGNLAPEVTQLDLHRHFHSLG----AGVIEEVRVQRDKGFGFVRYSTHAEA 313
+ + ++VG+L+ EV L + F + G A V+ +++ R +G+GFV + A+A
Sbjct: 176 DTSNHFHIFVGDLSNEVNDEVLLQAFSTFGPVSEARVMWDMKTGRSRGYGFVAFRDRADA 235
Query: 314 ALAIQMGNTTQSSYLFGKQMKCSWGSKPTPPGTS 347
A+ N+ +L + ++C+W ++ P S
Sbjct: 236 ERAL---NSMDGEWLGSRAIRCNWANQKGQPSIS 266
>gi|350291093|gb|EGZ72307.1| hypothetical protein NEUTE2DRAFT_144798 [Neurospora tetrasperma
FGSC 2509]
Length = 490
Score = 230 bits (586), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 145/365 (39%), Positives = 194/365 (53%), Gaps = 40/365 (10%)
Query: 57 RSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLI-------------RKDKSSYGFIHYFD 103
R++YVG + +VTE +L+++F +TG V+ K+I R+ +YGF+ Y D
Sbjct: 91 RALYVGGLDPRVTEDVLRQIFETTGHVQNVKIIPDKNVGKPGSEQPRQKGYNYGFVEYDD 150
Query: 104 RRSAAMAILSLNGRHLFGQPIKVNWAYASGQ--REDTSGHFNIFVGDLSPEVTDATLFAC 161
+A A+ +LNGR + I+VNWAY S +EDTSGHF+IFVGDLS EV D L
Sbjct: 151 PGAAERAMQTLNGRRVHQSEIRVNWAYQSNNQNKEDTSGHFHIFVGDLSNEVNDEVLLQA 210
Query: 162 FSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKG 221
FS + S S+ARVMWD KTGRSRG+GFV+FR++ DA+ A++ + G+WLGSR IRCNWA
Sbjct: 211 FSAFGSVSEARVMWDMKTGRSRGYGFVAFRDRPDAEKALSSMDGEWLGSRAIRCNWA--- 267
Query: 222 AGNNEDKQSSDAKSVVELTNGSSED-----------GKETTNTEAPENNPQYTTVYVGNL 270
N+ Q S A+ G + G + + + TT YVGNL
Sbjct: 268 ---NQKGQPSIAQQQAMQQMGLTPTTPYGHHHFPTHGVHSYDMIVAQTPAWQTTCYVGNL 324
Query: 271 APEVTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFG 330
P TQ DL F + G + E R Q D+GF F++ TH AA+AI N Q + G
Sbjct: 325 TPYTTQNDLVPLFQNF--GYVVESRFQADRGFAFIKMDTHENAAMAICQLNGYQ---VNG 379
Query: 331 KQMKCSWGSKPTPPGTSSNPLPP--PAAAPIPGLSAADLLAYERQIAMSKMGGVHALMHP 388
+ +KCSWG TP +P P P +A PG Y S G P
Sbjct: 380 RPLKCSWGKDKTPNPQQFDPNQPYSPQSAQTPGYPGTP-STYFNNYGNSYPGQQGNYNGP 438
Query: 389 QAQHP 393
QAQ P
Sbjct: 439 QAQSP 443
>gi|296815788|ref|XP_002848231.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Arthroderma otae CBS 113480]
gi|238841256|gb|EEQ30918.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Arthroderma otae CBS 113480]
Length = 507
Score = 230 bits (586), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 134/303 (44%), Positives = 182/303 (60%), Gaps = 21/303 (6%)
Query: 57 RSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKS------SYGFIHYFDRRSAAMA 110
R++YVG + +VTE +L+++F +TG V+ K+I DK+ +YGFI Y D +A A
Sbjct: 102 RALYVGGLDPRVTEDILKQIFETTGHVQSVKII-PDKNFQSKGLNYGFIEYDDPGAAERA 160
Query: 111 ILSLNGRHLFGQPIKVNWAYAS--GQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSC 168
+ +LNGR + I+VNWAY S +EDTS HF+IFVGDLS EV D L FS S
Sbjct: 161 MQTLNGRRVHQSEIRVNWAYQSNTASKEDTSNHFHIFVGDLSNEVNDEVLLQAFSACGSV 220
Query: 169 SDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT-KGAGNNED 227
S+ARVMWD KTGRSRG+GFV+FR++ DA+ A++ + G+WLGSR IRCNWA KG +
Sbjct: 221 SEARVMWDMKTGRSRGYGFVAFRDRADAEKALSSMDGEWLGSRAIRCNWANQKGQPSISQ 280
Query: 228 KQSSDAKSVVELT----NGSSEDGKETTNTEAPENNPQY-TTVYVGNLAPEVTQLDLHRH 282
+Q+ A + T + G ++ + + PQ+ TT YVGNL P TQ DL
Sbjct: 281 QQAMAAMGMTPTTPFGHHHFPTHGVQSYDMVV-QQTPQWQTTCYVGNLTPYTTQNDLIPL 339
Query: 283 FHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSKPT 342
F + G + E R Q D+GF FV+ TH AA+AI N + G+ +KCSWG
Sbjct: 340 FQNF--GYVVETRFQADRGFAFVKMDTHENAAMAICQLNGYN---VNGRPLKCSWGKDRP 394
Query: 343 PPG 345
P G
Sbjct: 395 PTG 397
>gi|384245275|gb|EIE18770.1| RNA-binding domain-containing protein [Coccomyxa subellipsoidea
C-169]
Length = 351
Score = 230 bits (586), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 124/307 (40%), Positives = 185/307 (60%), Gaps = 30/307 (9%)
Query: 57 RSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDK-----SSYGFIHYFDRRSAAMAI 111
+++YVGN+H VT+ +LQE+FS+ G V K+I KDK + YGF+ + D R+A MA+
Sbjct: 22 KALYVGNLHPFVTDAMLQEIFSTLGQVGEIKII-KDKLTGLSAGYGFVQFLDHRAADMAL 80
Query: 112 LSLNGRHLFGQPIKVNWAYASGQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDA 171
SLNGR L GQ ++VNWA+ QRED++ F IFVGDL+ ++ D L F C+DA
Sbjct: 81 QSLNGRVLHGQELRVNWAFQKDQREDSASQFQIFVGDLASDINDKLLCEAFQS-CGCADA 139
Query: 172 RVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSS 231
RVMWD TGRS+G+GFVSF+ + DA+ A++ ++G LGSR+IRC WA E+ Q+S
Sbjct: 140 RVMWDHNTGRSKGYGFVSFKTRADAEQALSQMSGTMLGSRRIRCGWAQH---KQENSQAS 196
Query: 232 DAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVI 291
A + + +P+ VYVGNLAP+V+ +L GA +
Sbjct: 197 FAAV------------DRVSTLSRAQADPENANVYVGNLAPDVSDAELQTAVSQFGA--V 242
Query: 292 EEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWG---SKPTPPGTSS 348
+V++ R G+ F ++++HA+A AI +G + Q+ L GK +KCSWG ++ PG +
Sbjct: 243 LDVKIYRKGGYAFAQFASHADAVRAI-VGLSGQN--LGGKALKCSWGRHQARKGGPGGAQ 299
Query: 349 NPLPPPA 355
P+ P +
Sbjct: 300 LPVDPAS 306
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 88/186 (47%), Gaps = 26/186 (13%)
Query: 52 DPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKD---KSSYGFIHYFDRRSAA 108
D ++ ++VG++ + + + LL E F S G + + + YGF+ + R A
Sbjct: 106 DSASQFQIFVGDLASDINDKLLCEAFQSCGCADARVMWDHNTGRSKGYGFVSFKTRADAE 165
Query: 109 MAILSLNGRHLFGQPIKVNWA----------YASGQREDTSG-------HFNIFVGDLSP 151
A+ ++G L + I+ WA +A+ R T + N++VG+L+P
Sbjct: 166 QALSQMSGTMLGSRRIRCGWAQHKQENSQASFAAVDRVSTLSRAQADPENANVYVGNLAP 225
Query: 152 EVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSR 211
+V+DA L S + + D ++ R G+ F F + DA AI L+G+ LG +
Sbjct: 226 DVSDAELQTAVSQFGAVLDVKIY------RKGGYAFAQFASHADAVRAIVGLSGQNLGGK 279
Query: 212 QIRCNW 217
++C+W
Sbjct: 280 ALKCSW 285
>gi|121701611|ref|XP_001269070.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Aspergillus clavatus NRRL 1]
gi|119397213|gb|EAW07644.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Aspergillus clavatus NRRL 1]
Length = 480
Score = 229 bits (585), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 133/308 (43%), Positives = 184/308 (59%), Gaps = 22/308 (7%)
Query: 57 RSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKS-------SYGFIHYFDRRSAAM 109
R++YVG + +VTE +L+++F +TG V+ K+I DK+ +YGF+ + D +A
Sbjct: 92 RALYVGGLDPRVTEDILKQIFETTGHVQSVKVI-PDKNKFNSKGYNYGFVEFDDPGAAER 150
Query: 110 AILSLNGRHLFGQPIKVNWAYASG--QREDTSGHFNIFVGDLSPEVTDATLFACFSVYPS 167
A+ +LNGR + I+VNWAY S +EDTSGHF+IFVGDLS EV D L FS + S
Sbjct: 151 AMQTLNGRRIHQSEIRVNWAYQSNTTSKEDTSGHFHIFVGDLSNEVNDEILMQAFSAFGS 210
Query: 168 CSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT-KGAGNNE 226
S+ARVMWD KTGRSRG+GFV+FR++ DA A+N + G+WLGSR IRCNWA KG +
Sbjct: 211 VSEARVMWDMKTGRSRGYGFVAFRDRGDADKALNSMDGEWLGSRAIRCNWANQKGQPSIS 270
Query: 227 DKQSSDAKSVVELT----NGSSEDGKETTNTEAPENNPQY-TTVYVGNLAPEVTQLDLHR 281
+Q+ A + T + G ++ + + PQ+ TT YVGNL P Q DL
Sbjct: 271 QQQAMAAMGMTPTTPFGHHHFPTHGVQSYDMVV-QQTPQWQTTCYVGNLTPYTAQNDLVP 329
Query: 282 HFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSKP 341
F + G + E R+Q D+GF F++ TH AA+AI N + G+ +KCSWG
Sbjct: 330 LFQNF--GYVLETRLQADRGFAFIKMDTHENAAMAICQLNGYN---VNGRPLKCSWGKDR 384
Query: 342 TPPGTSSN 349
P G N
Sbjct: 385 PPTGQFDN 392
>gi|119174082|ref|XP_001239402.1| hypothetical protein CIMG_09023 [Coccidioides immitis RS]
Length = 485
Score = 229 bits (585), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 133/303 (43%), Positives = 182/303 (60%), Gaps = 21/303 (6%)
Query: 57 RSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKS------SYGFIHYFDRRSAAMA 110
R++YVG + +VTE +L+++F +TG V+ K+I DK+ +YGF+ Y D +A A
Sbjct: 92 RALYVGGLDPRVTEDILRQIFETTGHVQSVKII-PDKNFQSKGLNYGFVEYDDPGAAERA 150
Query: 111 ILSLNGRHLFGQPIKVNWAYAS--GQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSC 168
+ +LNGR + I+VNWAY S +EDTS HF+IFVGDLS EV D L FS + S
Sbjct: 151 MQTLNGRRVHQSEIRVNWAYQSNNANKEDTSNHFHIFVGDLSNEVNDEVLLQAFSAFGSV 210
Query: 169 SDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT-KGAGNNED 227
S+ARVMWD KTGRSRG+GFV+FR + DA+ A++ + G+WLGSR IRCNWA KG +
Sbjct: 211 SEARVMWDMKTGRSRGYGFVAFRERADAEKALSSMDGEWLGSRAIRCNWANQKGQPSISQ 270
Query: 228 KQSSDAKSVVELT----NGSSEDGKETTNTEAPENNPQY-TTVYVGNLAPEVTQLDLHRH 282
+Q+ A + T + G ++ + + PQ+ TT YVGNL P TQ DL
Sbjct: 271 QQAMAAMGMTPTTPFGHHHFPTHGVQSYDMVV-QQTPQWQTTCYVGNLTPYTTQNDLVPL 329
Query: 283 FHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSKPT 342
F + G + E R Q D+GF FV+ TH AA+AI N + G+ +KCSWG
Sbjct: 330 FQNF--GYVVETRFQADRGFAFVKMDTHENAAMAICQLNGYN---VNGRPLKCSWGKDRP 384
Query: 343 PPG 345
P G
Sbjct: 385 PTG 387
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 84/208 (40%), Gaps = 47/208 (22%)
Query: 52 DPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKS----SYGFIHYFDRRSA 107
D S ++VG++ +V + +L + FS+ G V +++ K+ YGF+ + +R A
Sbjct: 179 DTSNHFHIFVGDLSNEVNDEVLLQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRERADA 238
Query: 108 AMAILSLNGRHLFGQPIKVNWAYASGQREDTS---------------GHFNI-------- 144
A+ S++G L + I+ NWA GQ + GH +
Sbjct: 239 EKALSSMDGEWLGSRAIRCNWANQKGQPSISQQQAMAAMGMTPTTPFGHHHFPTHGVQSY 298
Query: 145 --------------FVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSF 190
+VG+L+P T L F + + R D RGF FV
Sbjct: 299 DMVVQQTPQWQTTCYVGNLTPYTTQNDLVPLFQNFGYVVETRFQAD------RGFAFVKM 352
Query: 191 RNQQDAQSAINDLTGKWLGSRQIRCNWA 218
++A AI L G + R ++C+W
Sbjct: 353 DTHENAAMAICQLNGYNVNGRPLKCSWG 380
>gi|315052890|ref|XP_003175819.1| nucleolysin TIA-1 [Arthroderma gypseum CBS 118893]
gi|311341134|gb|EFR00337.1| nucleolysin TIA-1 [Arthroderma gypseum CBS 118893]
Length = 506
Score = 229 bits (585), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 133/306 (43%), Positives = 179/306 (58%), Gaps = 23/306 (7%)
Query: 57 RSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS---------YGFIHYFDRRSA 107
R++YVG + +VTE +L+++F +TG V+ K+I +S YGFI Y D +A
Sbjct: 97 RALYVGGLDPRVTEDILKQIFETTGHVQSVKIIPDKNASAQFQSKGLNYGFIEYDDPGAA 156
Query: 108 AMAILSLNGRHLFGQPIKVNWAYAS--GQREDTSGHFNIFVGDLSPEVTDATLFACFSVY 165
A+ +LNGR + I+VNWAY S +EDTS HF+IFVGDLS EV D L FS
Sbjct: 157 ERAMQTLNGRRVHQSEIRVNWAYQSNTASKEDTSSHFHIFVGDLSNEVNDEVLLQAFSAC 216
Query: 166 PSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT-KGAGN 224
S S+ARVMWD KTGRSRG+GFV+FR + DA+ A++ + G+WLGSR IRCNWA KG +
Sbjct: 217 GSVSEARVMWDMKTGRSRGYGFVAFRERADAEKALSSMDGEWLGSRAIRCNWANQKGQPS 276
Query: 225 NEDKQSSDAKSVVELT----NGSSEDGKETTNTEAPENNPQY-TTVYVGNLAPEVTQLDL 279
+Q+ A + T + G ++ + + PQ+ TT YVGNL P TQ DL
Sbjct: 277 ISQQQAMAAMGMTPTTPFGHHHFPTHGVQSYDMVV-QQTPQWQTTCYVGNLTPYTTQNDL 335
Query: 280 HRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGS 339
F + G + E R Q D+GF FV+ TH AA+AI N + G+ +KCSWG
Sbjct: 336 IPLFQNF--GYVVETRFQADRGFAFVKMDTHENAAMAICQLNGYN---VNGRPLKCSWGK 390
Query: 340 KPTPPG 345
P G
Sbjct: 391 DRPPTG 396
>gi|326480772|gb|EGE04782.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Trichophyton equinum CBS 127.97]
Length = 507
Score = 229 bits (585), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 134/303 (44%), Positives = 181/303 (59%), Gaps = 21/303 (6%)
Query: 57 RSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKS------SYGFIHYFDRRSAAMA 110
R++YVG + +VTE +L+++F +TG V+ K+I DK+ +YGFI Y D +A A
Sbjct: 102 RALYVGGLDPRVTEDILKQIFETTGHVQSVKII-PDKNFQSKGLNYGFIEYDDPGAAERA 160
Query: 111 ILSLNGRHLFGQPIKVNWAYAS--GQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSC 168
+ +LNGR + I+VNWAY S +EDTS HF+IFVGDLS EV D L FS S
Sbjct: 161 MQTLNGRRVHQSEIRVNWAYQSNTASKEDTSSHFHIFVGDLSNEVNDEVLLQAFSACGSV 220
Query: 169 SDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT-KGAGNNED 227
S+ARVMWD KTGRSRG+GFV+FR + DA+ A++ + G+WLGSR IRCNWA KG +
Sbjct: 221 SEARVMWDMKTGRSRGYGFVAFRERADAEKALSSMDGEWLGSRAIRCNWANQKGQPSISQ 280
Query: 228 KQSSDAKSVVELT----NGSSEDGKETTNTEAPENNPQY-TTVYVGNLAPEVTQLDLHRH 282
+Q+ A + T + G ++ + + PQ+ TT YVGNL P TQ DL
Sbjct: 281 QQAMAAMGMTPTTPFGHHHFPTHGVQSYDMVV-QQTPQWQTTCYVGNLTPYTTQNDLIPL 339
Query: 283 FHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSKPT 342
F + G + E R Q D+GF FV+ TH AA+AI N + G+ +KCSWG
Sbjct: 340 FQNF--GYVVETRFQADRGFAFVKMDTHENAAMAICQLNGYN---VNGRPLKCSWGKDRP 394
Query: 343 PPG 345
P G
Sbjct: 395 PTG 397
>gi|392869588|gb|EJB11873.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Coccidioides immitis RS]
Length = 466
Score = 229 bits (585), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 133/303 (43%), Positives = 182/303 (60%), Gaps = 21/303 (6%)
Query: 57 RSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKS------SYGFIHYFDRRSAAMA 110
R++YVG + +VTE +L+++F +TG V+ K+I DK+ +YGF+ Y D +A A
Sbjct: 92 RALYVGGLDPRVTEDILRQIFETTGHVQSVKII-PDKNFQSKGLNYGFVEYDDPGAAERA 150
Query: 111 ILSLNGRHLFGQPIKVNWAYAS--GQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSC 168
+ +LNGR + I+VNWAY S +EDTS HF+IFVGDLS EV D L FS + S
Sbjct: 151 MQTLNGRRVHQSEIRVNWAYQSNNANKEDTSNHFHIFVGDLSNEVNDEVLLQAFSAFGSV 210
Query: 169 SDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT-KGAGNNED 227
S+ARVMWD KTGRSRG+GFV+FR + DA+ A++ + G+WLGSR IRCNWA KG +
Sbjct: 211 SEARVMWDMKTGRSRGYGFVAFRERADAEKALSSMDGEWLGSRAIRCNWANQKGQPSISQ 270
Query: 228 KQSSDAKSVVELT----NGSSEDGKETTNTEAPENNPQY-TTVYVGNLAPEVTQLDLHRH 282
+Q+ A + T + G ++ + + PQ+ TT YVGNL P TQ DL
Sbjct: 271 QQAMAAMGMTPTTPFGHHHFPTHGVQSYDMVV-QQTPQWQTTCYVGNLTPYTTQNDLVPL 329
Query: 283 FHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSKPT 342
F + G + E R Q D+GF FV+ TH AA+AI N + G+ +KCSWG
Sbjct: 330 FQNF--GYVVETRFQADRGFAFVKMDTHENAAMAICQLNGYN---VNGRPLKCSWGKDRP 384
Query: 343 PPG 345
P G
Sbjct: 385 PTG 387
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 84/208 (40%), Gaps = 47/208 (22%)
Query: 52 DPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKS----SYGFIHYFDRRSA 107
D S ++VG++ +V + +L + FS+ G V +++ K+ YGF+ + +R A
Sbjct: 179 DTSNHFHIFVGDLSNEVNDEVLLQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRERADA 238
Query: 108 AMAILSLNGRHLFGQPIKVNWAYASGQREDTS---------------GHFNI-------- 144
A+ S++G L + I+ NWA GQ + GH +
Sbjct: 239 EKALSSMDGEWLGSRAIRCNWANQKGQPSISQQQAMAAMGMTPTTPFGHHHFPTHGVQSY 298
Query: 145 --------------FVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSF 190
+VG+L+P T L F + + R D RGF FV
Sbjct: 299 DMVVQQTPQWQTTCYVGNLTPYTTQNDLVPLFQNFGYVVETRFQAD------RGFAFVKM 352
Query: 191 RNQQDAQSAINDLTGKWLGSRQIRCNWA 218
++A AI L G + R ++C+W
Sbjct: 353 DTHENAAMAICQLNGYNVNGRPLKCSWG 380
>gi|327299776|ref|XP_003234581.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Trichophyton rubrum CBS 118892]
gi|326463475|gb|EGD88928.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Trichophyton rubrum CBS 118892]
Length = 507
Score = 229 bits (585), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 134/303 (44%), Positives = 181/303 (59%), Gaps = 21/303 (6%)
Query: 57 RSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKS------SYGFIHYFDRRSAAMA 110
R++YVG + +VTE +L+++F +TG V+ K+I DK+ +YGFI Y D +A A
Sbjct: 102 RALYVGGLDPRVTEDILKQIFETTGHVQSVKII-PDKNFQSKGLNYGFIEYDDPGAAERA 160
Query: 111 ILSLNGRHLFGQPIKVNWAYAS--GQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSC 168
+ +LNGR + I+VNWAY S +EDTS HF+IFVGDLS EV D L FS S
Sbjct: 161 MQTLNGRRVHQSEIRVNWAYQSNTASKEDTSSHFHIFVGDLSNEVNDEVLLQAFSACGSV 220
Query: 169 SDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT-KGAGNNED 227
S+ARVMWD KTGRSRG+GFV+FR + DA+ A++ + G+WLGSR IRCNWA KG +
Sbjct: 221 SEARVMWDMKTGRSRGYGFVAFRERADAEKALSSMDGEWLGSRAIRCNWANQKGQPSISQ 280
Query: 228 KQSSDAKSVVELT----NGSSEDGKETTNTEAPENNPQY-TTVYVGNLAPEVTQLDLHRH 282
+Q+ A + T + G ++ + + PQ+ TT YVGNL P TQ DL
Sbjct: 281 QQAMAAMGMTPTTPFGHHHFPTHGVQSYDMVV-QQTPQWQTTCYVGNLTPYTTQNDLIPL 339
Query: 283 FHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSKPT 342
F + G + E R Q D+GF FV+ TH AA+AI N + G+ +KCSWG
Sbjct: 340 FQNF--GYVVETRFQADRGFAFVKMDTHENAAMAICQLNGYN---VNGRPLKCSWGKDRP 394
Query: 343 PPG 345
P G
Sbjct: 395 PTG 397
>gi|451997861|gb|EMD90326.1| hypothetical protein COCHEDRAFT_1106708 [Cochliobolus
heterostrophus C5]
Length = 455
Score = 229 bits (585), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 127/306 (41%), Positives = 176/306 (57%), Gaps = 22/306 (7%)
Query: 57 RSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS----------YGFIHYFDRRS 106
R++YVG + +VTE +L+++F +TG V+ K+I +S YGF+ Y D +
Sbjct: 52 RALYVGGLDPRVTEDVLRQIFETTGHVQSVKIIPDKTASSPSFNSKGFNYGFVEYDDPGA 111
Query: 107 AAMAILSLNGRHLFGQPIKVNWAYASGQ--REDTSGHFNIFVGDLSPEVTDATLFACFSV 164
A + +LNGR + I+VNWAY S +EDTS HF+IFVGDLS EV D L FS
Sbjct: 112 AERGMATLNGRRIHNNEIRVNWAYQSNNTAKEDTSNHFHIFVGDLSNEVNDEVLLQAFST 171
Query: 165 YPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGN 224
+ S+ARVMWD KTGRSRG+GFV+FR++ DA+ A+N + G+WLGSR IRCNWA +
Sbjct: 172 FGPVSEARVMWDMKTGRSRGYGFVAFRDRADAERALNSMDGEWLGSRAIRCNWANQKGQP 231
Query: 225 NEDKQSSDAKSVVELTNGSSEDGKETTNTEAPE----NNPQY-TTVYVGNLAPEVTQLDL 279
+ +Q + A + T T ++ + PQ+ TT YVGNL P +Q DL
Sbjct: 232 SISQQQAMASMGMTPTTPFGHHHFPTHGVQSYDMVVAQTPQWQTTCYVGNLTPYTSQADL 291
Query: 280 HRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGS 339
F + G + E R Q D+GF F++ TH AA+AI N + G+ +KCSWG
Sbjct: 292 VPLFQNF--GYVTETRFQSDRGFAFIKMDTHENAAMAICQLNGYN---VNGRPLKCSWGK 346
Query: 340 KPTPPG 345
P G
Sbjct: 347 DRPPTG 352
>gi|452986364|gb|EME86120.1| hypothetical protein MYCFIDRAFT_52503 [Pseudocercospora fijiensis
CIRAD86]
Length = 482
Score = 229 bits (584), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 130/305 (42%), Positives = 186/305 (60%), Gaps = 25/305 (8%)
Query: 57 RSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKS------SYGFIHYFDRRSAAMA 110
R++YVG + +VTE +L+++F +TG V+ K+I DK+ +YGF+ Y D +A A
Sbjct: 81 RALYVGGLDPRVTEDVLKQIFETTGHVQSVKII-PDKNFQSKGYNYGFVEYDDPGAAERA 139
Query: 111 ILSLNGRHLFGQPIKVNWAYAS--GQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSC 168
+ +LNGR + Q I+VNWAY S +EDTS HF+IFVGDLS EV D L FS + +
Sbjct: 140 MQTLNGRRVHQQEIRVNWAYQSNTATKEDTSNHFHIFVGDLSNEVNDEVLLQAFSAFGNV 199
Query: 169 SDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDK 228
S+ARVMWD KTGRSRG+GFV+FR++ +A+ A++ + G+WLGSR IRCNWA + + +
Sbjct: 200 SEARVMWDMKTGRSRGYGFVAFRDRGEAEKALSSMDGEWLGSRAIRCNWANQKGQPSFSQ 259
Query: 229 QSSDAKSVVELTNGSSEDGKETTNTEAPEN-------NPQY-TTVYVGNLAPEVTQLDLH 280
Q + A+ + T + G + T+ P++ PQ+ TT YVGNL P TQ DL
Sbjct: 260 QQAMAQMGMTPT---TPYGHHSFPTQGPQSYETIVSQTPQWQTTCYVGNLTPYTTQNDLV 316
Query: 281 RHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSK 340
F + G + E R Q D+GF F++ +H AA AI + Q + G+ +KCSWG
Sbjct: 317 PLFQNF--GYVTETRFQSDRGFAFIKMDSHENAANAICHLSGYQ---VNGRPLKCSWGKD 371
Query: 341 PTPPG 345
P G
Sbjct: 372 RPPTG 376
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 88/208 (42%), Gaps = 47/208 (22%)
Query: 52 DPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKS----SYGFIHYFDRRSA 107
D S ++VG++ +V + +L + FS+ G V +++ K+ YGF+ + DR A
Sbjct: 168 DTSNHFHIFVGDLSNEVNDEVLLQAFSAFGNVSEARVMWDMKTGRSRGYGFVAFRDRGEA 227
Query: 108 AMAILSLNGRHLFGQPIKVNWAYASGQREDTS---------------GHFNI-------- 144
A+ S++G L + I+ NWA GQ + GH +
Sbjct: 228 EKALSSMDGEWLGSRAIRCNWANQKGQPSFSQQQAMAQMGMTPTTPYGHHSFPTQGPQSY 287
Query: 145 --------------FVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSF 190
+VG+L+P T L F + ++ R D RGF F+
Sbjct: 288 ETIVSQTPQWQTTCYVGNLTPYTTQNDLVPLFQNFGYVTETRFQSD------RGFAFIKM 341
Query: 191 RNQQDAQSAINDLTGKWLGSRQIRCNWA 218
+ ++A +AI L+G + R ++C+W
Sbjct: 342 DSHENAANAICHLSGYQVNGRPLKCSWG 369
>gi|58266842|ref|XP_570577.1| mRNA catabolism, nonsense-mediated-related protein [Cryptococcus
neoformans var. neoformans JEC21]
gi|134110468|ref|XP_776061.1| hypothetical protein CNBD1090 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50258729|gb|EAL21414.1| hypothetical protein CNBD1090 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57226810|gb|AAW43270.1| mRNA catabolism, nonsense-mediated-related protein, putative
[Cryptococcus neoformans var. neoformans JEC21]
Length = 434
Score = 229 bits (584), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 130/313 (41%), Positives = 175/313 (55%), Gaps = 42/313 (13%)
Query: 59 VYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKS------SYGFIHYFDRRSAAMAIL 112
+YVGN+ +VT+ +L E+F+ GPV K+I +D++ +YGF+ Y D RSA A+
Sbjct: 24 LYVGNLSPRVTDYILTEIFAVAGPVVSAKII-QDRNFQHGGFNYGFVEYADMRSADQALT 82
Query: 113 SLNGRHLFGQPIKVNWAYASGQ-REDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDA 171
+LNGR +F I+VNWAY Q +EDT H+++FVGDLSPEV D L F + S S+A
Sbjct: 83 TLNGRKIFDAEIRVNWAYQGNQNKEDTQHHYHVFVGDLSPEVNDDVLSKAFGAFGSLSEA 142
Query: 172 RVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSS 231
RVMWD +G+SRG+GF+SFR++ DA+ AI + G+WLGSR IR NWA + +
Sbjct: 143 RVMWDMNSGKSRGYGFLSFRDKADAEQAIASMNGEWLGSRAIRVNWANQKTQTGGTRTGG 202
Query: 232 DAKSVVELTNGSSEDGK--------------------------ETTNTEAPENNPQYTTV 265
S G+ ET ++ PE N TTV
Sbjct: 203 GTPSYPAPPMGAPPAPAGVPSAYGAPAPGVVPGVGVGGAVGSYETVASQTPEFN---TTV 259
Query: 266 YVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQS 325
YVGNL P TQ DL F G G I E+R+Q D+GF FV+ TH AALAI Q+
Sbjct: 260 YVGNLIPYTTQADLIPLFQ--GYGYIVEIRMQADRGFAFVKLDTHQNAALAI---THLQN 314
Query: 326 SYLFGKQMKCSWG 338
+ G+ +KCSWG
Sbjct: 315 QLVHGRPIKCSWG 327
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 97/222 (43%), Gaps = 43/222 (19%)
Query: 126 VNWAYASGQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSR-G 184
V + GQ + +++VG+LSP VTD L F+V A+++ D+
Sbjct: 6 VQYGITPGQSAEAPKRPHLYVGNLSPRVTDYILTEIFAVAGPVVSAKIIQDRNFQHGGFN 65
Query: 185 FGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSS 244
+GFV + + + A A+ L G+ + +IR NWA +G N ED Q
Sbjct: 66 YGFVEYADMRSADQALTTLNGRKIFDAEIRVNWAYQGNQNKEDTQ--------------- 110
Query: 245 EDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRD----- 299
+ V+VG+L+PEV L + F + G+ + E RV D
Sbjct: 111 ----------------HHYHVFVGDLSPEVNDDVLSKAFGAFGS--LSEARVMWDMNSGK 152
Query: 300 -KGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSK 340
+G+GF+ + A+A AI N +L + ++ +W ++
Sbjct: 153 SRGYGFLSFRDKADAEQAIASMN---GEWLGSRAIRVNWANQ 191
Score = 39.3 bits (90), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 40/84 (47%), Gaps = 2/84 (2%)
Query: 53 PSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSSYGFIHYFDRRSAAMAIL 112
P +VYVGN+ T+ L +F G + ++ + + F+ ++AA+AI
Sbjct: 253 PEFNTTVYVGNLIPYTTQADLIPLFQGYGYIVEIRM--QADRGFAFVKLDTHQNAALAIT 310
Query: 113 SLNGRHLFGQPIKVNWAYASGQRE 136
L + + G+PIK +W G E
Sbjct: 311 HLQNQLVHGRPIKCSWGKDKGSME 334
>gi|361127946|gb|EHK99901.1| putative Nucleolysin TIA-1 [Glarea lozoyensis 74030]
Length = 505
Score = 229 bits (584), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 132/305 (43%), Positives = 179/305 (58%), Gaps = 25/305 (8%)
Query: 57 RSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKS----------SYGFIHYFDRRS 106
R++YVG + +VTE +L+++F +TG V+ K+I DK+ +YGF+ Y D +
Sbjct: 87 RALYVGGLDPRVTEDVLRQIFETTGHVQHVKII-PDKNVGAEQQAKGFNYGFVEYDDPGA 145
Query: 107 AAMAILSLNGRHLFGQPIKVNWAYASG--QREDTSGHFNIFVGDLSPEVTDATLFACFSV 164
A A+ +LNGR + I+VNWAY S +EDTS HF+IFVGDLS EV D L FS
Sbjct: 146 AERAMQTLNGRRVHQAEIRVNWAYQSNTSNKEDTSNHFHIFVGDLSNEVNDEVLLQAFSA 205
Query: 165 YPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT-KGAG 223
+ S S+ARVMWD KTGRSRG+GFV+FR +QDA+ A++ + G+WLGSR IRCNWA KG
Sbjct: 206 FGSVSEARVMWDMKTGRSRGYGFVAFRERQDAEKALSSMDGEWLGSRAIRCNWANQKGQP 265
Query: 224 NNEDKQSSDAKSVVELT----NGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDL 279
+ +Q A + T + G ++ + + TT YVGNL P TQ DL
Sbjct: 266 SISQQQQMSAMGMTPTTPFGHHHFPTHGVQSFDMIVQQTPAWQTTCYVGNLTPYTTQNDL 325
Query: 280 HRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSY-LFGKQMKCSWG 338
F + G + E R Q D+GF FV+ TH AA+AI S Y + G+ +KCSWG
Sbjct: 326 IPLFQNF--GFVVETRFQADRGFAFVKMDTHENAAMAI----CQLSGYNVNGRPLKCSWG 379
Query: 339 SKPTP 343
P
Sbjct: 380 KDKAP 384
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 87/212 (41%), Gaps = 47/212 (22%)
Query: 52 DPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKS----SYGFIHYFDRRSA 107
D S ++VG++ +V + +L + FS+ G V +++ K+ YGF+ + +R+ A
Sbjct: 178 DTSNHFHIFVGDLSNEVNDEVLLQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRERQDA 237
Query: 108 AMAILSLNGRHLFGQPIKVNWAYASGQREDTS---------------GHFNI-------- 144
A+ S++G L + I+ NWA GQ + GH +
Sbjct: 238 EKALSSMDGEWLGSRAIRCNWANQKGQPSISQQQQMSAMGMTPTTPFGHHHFPTHGVQSF 297
Query: 145 --------------FVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSF 190
+VG+L+P T L F + + R D RGF FV
Sbjct: 298 DMIVQQTPAWQTTCYVGNLTPYTTQNDLIPLFQNFGFVVETRFQAD------RGFAFVKM 351
Query: 191 RNQQDAQSAINDLTGKWLGSRQIRCNWATKGA 222
++A AI L+G + R ++C+W A
Sbjct: 352 DTHENAAMAICQLSGYNVNGRPLKCSWGKDKA 383
>gi|212538449|ref|XP_002149380.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Talaromyces marneffei ATCC 18224]
gi|210069122|gb|EEA23213.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Talaromyces marneffei ATCC 18224]
Length = 424
Score = 229 bits (583), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 132/308 (42%), Positives = 181/308 (58%), Gaps = 31/308 (10%)
Query: 57 RSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKS------SYGFIHYFDRRSAAMA 110
R++Y+G + +VTE +L+++F +TG V+ K+I DK+ +YGF+ Y D +A A
Sbjct: 91 RALYIGGLDARVTEDILKQIFETTGHVQSVKII-PDKNFQSKGMNYGFVEYDDPGAAERA 149
Query: 111 ILSLNGRHLFGQPIKVNWAYASG--QREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSC 168
+ +LNGR + I+VNWAY S +EDTS HF+IFVGDLS EV D L FS + S
Sbjct: 150 MQTLNGRRIHQSEIRVNWAYQSNNTHKEDTSNHFHIFVGDLSNEVNDEVLLQAFSAFGSV 209
Query: 169 SDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT-KGAGNNED 227
S+ARVMWD KTGRSRG+GFV+FR +DA+ A+ + +WLGSR IRCNWA KG +
Sbjct: 210 SEARVMWDMKTGRSRGYGFVAFREFEDAEKALKSMDREWLGSRAIRCNWANQKGQPSISQ 269
Query: 228 KQSSDAKSVVEL---------TNGSSEDGKETTNTEAPENNPQY-TTVYVGNLAPEVTQL 277
+Q+ A + T+G++ T PQ+ TT YVGNL P TQ
Sbjct: 270 QQAMAAMGMTPTAPFGHHHFPTHGANSYDMVVAQT------PQWQTTCYVGNLTPYTTQN 323
Query: 278 DLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSW 337
DL F + G + E R+Q D+GF F++ TH AA+AI N Q + G+ +KCSW
Sbjct: 324 DLVPLFQNF--GYVVETRLQADRGFAFLKMDTHENAAMAICQLNGYQVN---GRPLKCSW 378
Query: 338 GSKPTPPG 345
G P G
Sbjct: 379 GKDRPPTG 386
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 83/207 (40%), Gaps = 47/207 (22%)
Query: 52 DPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKS----SYGFIHYFDRRSA 107
D S ++VG++ +V + +L + FS+ G V +++ K+ YGF+ + + A
Sbjct: 178 DTSNHFHIFVGDLSNEVNDEVLLQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFREFEDA 237
Query: 108 AMAILSLNGRHLFGQPIKVNWAYASGQREDTS---------------GHFNI-------- 144
A+ S++ L + I+ NWA GQ + GH +
Sbjct: 238 EKALKSMDREWLGSRAIRCNWANQKGQPSISQQQAMAAMGMTPTAPFGHHHFPTHGANSY 297
Query: 145 --------------FVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSF 190
+VG+L+P T L F + + R+ D RGF F+
Sbjct: 298 DMVVAQTPQWQTTCYVGNLTPYTTQNDLVPLFQNFGYVVETRLQAD------RGFAFLKM 351
Query: 191 RNQQDAQSAINDLTGKWLGSRQIRCNW 217
++A AI L G + R ++C+W
Sbjct: 352 DTHENAAMAICQLNGYQVNGRPLKCSW 378
>gi|350629665|gb|EHA18038.1| hypothetical protein ASPNIDRAFT_176547 [Aspergillus niger ATCC
1015]
Length = 496
Score = 228 bits (582), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 130/306 (42%), Positives = 179/306 (58%), Gaps = 19/306 (6%)
Query: 57 RSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKS------SYGFIHYFDRRSAAMA 110
R++YVG + +VTE +L+++F +TG V K+I DK+ +YGF+ + D +A A
Sbjct: 91 RALYVGGLDPRVTEDILKQIFETTGHVVSVKII-PDKNFNSKGYNYGFVEFDDPGAAERA 149
Query: 111 ILSLNGRHLFGQPIKVNWAYASG--QREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSC 168
+ +LNGR + I+VNWAY S +EDTS HF+IFVGDLS EV D L FS + S
Sbjct: 150 MQTLNGRRIHQSEIRVNWAYQSNSTNKEDTSNHFHIFVGDLSNEVNDEVLLQAFSAFGSV 209
Query: 169 SDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDK 228
S+ARVMWD KTGRSRG+GFV+FR + DA A++ + G+WLGSR IRCNWA + + +
Sbjct: 210 SEARVMWDMKTGRSRGYGFVAFRERSDADKALSSMDGEWLGSRAIRCNWANQKGQPSISQ 269
Query: 229 QSSDAKSVVELTNGSSEDGKETTNTEA----PENNPQY-TTVYVGNLAPEVTQLDLHRHF 283
Q + A + T T ++ + PQ+ TT YVGNL P TQ DL F
Sbjct: 270 QQAMAAMGMTPTTAFGHHHFPTHGIQSYDMVVQQTPQWQTTCYVGNLTPYTTQTDLVPLF 329
Query: 284 HSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSKPTP 343
+ G + E R+Q D+GF F++ TH AA+AI N + G+ +KCSWG P
Sbjct: 330 QNF--GYVIETRLQADRGFAFIKMDTHENAAMAICQLNGYN---VNGRPLKCSWGKDRPP 384
Query: 344 PGTSSN 349
G N
Sbjct: 385 TGQFDN 390
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 85/208 (40%), Gaps = 47/208 (22%)
Query: 52 DPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKS----SYGFIHYFDRRSA 107
D S ++VG++ +V + +L + FS+ G V +++ K+ YGF+ + +R A
Sbjct: 178 DTSNHFHIFVGDLSNEVNDEVLLQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRERSDA 237
Query: 108 AMAILSLNGRHLFGQPIKVNWAYASGQREDTS---------------GHFNI-------- 144
A+ S++G L + I+ NWA GQ + GH +
Sbjct: 238 DKALSSMDGEWLGSRAIRCNWANQKGQPSISQQQAMAAMGMTPTTAFGHHHFPTHGIQSY 297
Query: 145 --------------FVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSF 190
+VG+L+P T L F + + R+ D RGF F+
Sbjct: 298 DMVVQQTPQWQTTCYVGNLTPYTTQTDLVPLFQNFGYVIETRLQAD------RGFAFIKM 351
Query: 191 RNQQDAQSAINDLTGKWLGSRQIRCNWA 218
++A AI L G + R ++C+W
Sbjct: 352 DTHENAAMAICQLNGYNVNGRPLKCSWG 379
>gi|395335144|gb|EJF67520.1| hypothetical protein DICSQDRAFT_164378 [Dichomitus squalens
LYAD-421 SS1]
Length = 395
Score = 228 bits (582), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 132/302 (43%), Positives = 179/302 (59%), Gaps = 26/302 (8%)
Query: 72 LLQEVFSSTGPVEGCKLIRKDKS------SYGFIHYFDRRSAAMAILSLNGRHLFGQPIK 125
+L E+F+ GPV+ K+I D++ +YGF+ Y D R+A A+ +LNGR +F I+
Sbjct: 1 MLTEIFAVAGPVQHVKII-PDRNYQHGGLNYGFVEYMDMRAAETALQTLNGRKIFDTEIR 59
Query: 126 VNWAYASGQ-REDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRG 184
VNWAY Q +EDTS H+++FVGDLSPEV D L FS + + SDARVMWD +G+SRG
Sbjct: 60 VNWAYQGQQNKEDTSNHYHVFVGDLSPEVNDDVLAKAFSAFGTLSDARVMWDMNSGKSRG 119
Query: 185 FGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWA---TKG---AGNNEDKQSSDAKSVVE 238
+GF++FR++ DA+ AI + G+WLGSR IR NWA T+G AG A + +
Sbjct: 120 YGFLAFRDKTDAEQAIATMNGEWLGSRAIRVNWANQKTQGAPPAGPPRTGMGGGAPAPMN 179
Query: 239 LTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQR 298
G E+ + P N TTVYVGNL P TQ DL F S+ G + E+R+Q
Sbjct: 180 FQGGPLS--YESVVQQTPAYN---TTVYVGNLVPYATQADLIPLFQSI--GYLSEIRMQA 232
Query: 299 DKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWG-SKPTPPGTSSNPLPP-PAA 356
D+GF FV+ TH AA+AI Q + G+ +KCSWG + + SS L P P A
Sbjct: 233 DRGFAFVKLDTHEHAAMAIVQ---LQGQMVHGRPIKCSWGKDRDSGAALSSGSLSPTPTA 289
Query: 357 AP 358
AP
Sbjct: 290 AP 291
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 86/203 (42%), Gaps = 43/203 (21%)
Query: 52 DPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKS----SYGFIHYFDRRSA 107
D S V+VG++ +V + +L + FS+ G + +++ S YGF+ + D+ A
Sbjct: 72 DTSNHYHVFVGDLSPEVNDDVLAKAFSAFGTLSDARVMWDMNSGKSRGYGFLAFRDKTDA 131
Query: 108 AMAILSLNGRHLFGQPIKVNWA---------------------------------YASGQ 134
AI ++NG L + I+VNWA Y S
Sbjct: 132 EQAIATMNGEWLGSRAIRVNWANQKTQGAPPAGPPRTGMGGGAPAPMNFQGGPLSYESVV 191
Query: 135 REDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQ 194
++ + + ++VG+L P T A L F S+ R+ D RGF FV +
Sbjct: 192 QQTPAYNTTVYVGNLVPYATQADLIPLFQSIGYLSEIRMQAD------RGFAFVKLDTHE 245
Query: 195 DAQSAINDLTGKWLGSRQIRCNW 217
A AI L G+ + R I+C+W
Sbjct: 246 HAAMAIVQLQGQMVHGRPIKCSW 268
Score = 46.6 bits (109), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 53/104 (50%), Gaps = 8/104 (7%)
Query: 53 PSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSSYGFIHYFDRRSAAMAIL 112
P+ +VYVGN+ T+ L +F S G + ++ + D+ + F+ AAMAI+
Sbjct: 195 PAYNTTVYVGNLVPYATQADLIPLFQSIGYLSEIRM-QADR-GFAFVKLDTHEHAAMAIV 252
Query: 113 SLNGRHLFGQPIKVNWAYASGQREDTSGHFNIFVGDLSPEVTDA 156
L G+ + G+PIK +W G+ D+ + G LSP T A
Sbjct: 253 QLQGQMVHGRPIKCSW----GKDRDSGAALS--SGSLSPTPTAA 290
>gi|336271351|ref|XP_003350434.1| hypothetical protein SMAC_02147 [Sordaria macrospora k-hell]
gi|380090956|emb|CCC11489.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 495
Score = 228 bits (582), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 147/371 (39%), Positives = 196/371 (52%), Gaps = 47/371 (12%)
Query: 57 RSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKS-------------------SYG 97
R++YVG + +VTE +L+++F +TG V+ K+I DK+ +YG
Sbjct: 91 RALYVGGLDPRVTEDVLRQIFETTGHVQNVKII-PDKNVGKPGSPEQPHDAQQQKGYNYG 149
Query: 98 FIHYFDRRSAAMAILSLNGRHLFGQPIKVNWAYASGQ--REDTSGHFNIFVGDLSPEVTD 155
F+ Y D +A A+ +LNGR + I+VNWAY S +EDTSGHF+IFVGDLS EV D
Sbjct: 150 FVEYDDPGAAERAMQTLNGRRVHQSEIRVNWAYQSNNQNKEDTSGHFHIFVGDLSNEVND 209
Query: 156 ATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRC 215
L FS + S S+ARVMWD KTGRSRG+GFV+FR++ DA+ A++ + G+WLGSR IRC
Sbjct: 210 EVLLQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRDRPDAEKALSSMDGEWLGSRAIRC 269
Query: 216 NWATKGAGNNEDKQSSDAKSVVELTNGSSED-----------GKETTNTEAPENNPQYTT 264
NWA N+ Q S A+ G + G + + + TT
Sbjct: 270 NWA------NQKGQPSIAQQQAMQQMGLTPTTPYGHHHFPTHGVHSYDMIVAQTPAWQTT 323
Query: 265 VYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQ 324
YVGNL P TQ DL F + G + E R Q D+GF F++ TH AA+AI N Q
Sbjct: 324 CYVGNLTPYTTQNDLVPLFQNF--GYVVESRFQADRGFAFIKMDTHENAAMAICQLNGYQ 381
Query: 325 SSYLFGKQMKCSWGSKPTPPGTSSNPLPP--PAAAPIPGLSAADLLAYERQIAMSKMGGV 382
+ G+ +KCSWG TP +P P P +A PG Y Q S G
Sbjct: 382 ---VNGRPLKCSWGKDKTPNPQQFDPNQPYSPQSAQTPGYPGTP-STYFNQYGNSYPGQQ 437
Query: 383 HALMHPQAQHP 393
PQAQ P
Sbjct: 438 ANYNGPQAQSP 448
>gi|169614620|ref|XP_001800726.1| hypothetical protein SNOG_10456 [Phaeosphaeria nodorum SN15]
gi|160702784|gb|EAT81850.2| hypothetical protein SNOG_10456 [Phaeosphaeria nodorum SN15]
Length = 506
Score = 228 bits (582), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 133/337 (39%), Positives = 189/337 (56%), Gaps = 30/337 (8%)
Query: 33 LLAAPQIEPIPSGNLPPGFDPSTC------RSVYVGNIHTQVTEPLLQEVFSSTGPVEGC 86
L P ++ + G+ PG+ P R++YVG + +VTE +L+++F +TG V+
Sbjct: 56 LPGNPGLDAMSPGSGGPGYVPRRAAPEPNKRALYVGGLDPRVTEDVLRQIFETTGHVQSV 115
Query: 87 KLIRKDKS-----------SYGFIHYFDRRSAAMAILSLNGRHLFGQPIKVNWAYASGQ- 134
K+I DK+ +YGF+ Y D +A + +LNGR + I+VNWAY S
Sbjct: 116 KII-PDKTVSSPSVNSKGFNYGFVEYDDPGAAERGMATLNGRRIHNNEIRVNWAYQSNNT 174
Query: 135 -REDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQ 193
+EDTS HF+IFVGDLS EV D L FS + S+ARVMWD KTGRSRG+GFV+FR++
Sbjct: 175 AKEDTSNHFHIFVGDLSNEVNDEVLLQAFSTFGPVSEARVMWDMKTGRSRGYGFVAFRDR 234
Query: 194 QDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNT 253
DA+ A++ + G+WLGSR IRCNWA + + +Q + A + T T
Sbjct: 235 ADAERALSSMDGEWLGSRAIRCNWANQKGQPSISQQQAMASMGMTPTTPFGHHHFPTQGV 294
Query: 254 EAPE----NNPQY-TTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYS 308
++ + PQ+ TT YVGNL P +Q DL F + G + E R Q D+GF F++
Sbjct: 295 QSYDMVVAQTPQWQTTCYVGNLTPYTSQSDLVPLFQNF--GYVTETRFQSDRGFAFIKMD 352
Query: 309 THAEAALAIQMGNTTQSSYLFGKQMKCSWGSKPTPPG 345
TH AA+AI N + G+ +KCSWG P G
Sbjct: 353 THENAAMAICQLNGYN---VNGRPLKCSWGKDRPPTG 386
>gi|358371808|dbj|GAA88414.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Aspergillus kawachii IFO 4308]
Length = 478
Score = 228 bits (582), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 141/363 (38%), Positives = 195/363 (53%), Gaps = 29/363 (7%)
Query: 57 RSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKS-------SYGFIHYFDRRSAAM 109
R++YVG + +VTE +L+++F +TG V K+I DK+ +YGF+ + D +A
Sbjct: 91 RALYVGGLDPRVTEDILKQIFETTGHVVSVKII-PDKNKFNSKGYNYGFVEFDDPGAAER 149
Query: 110 AILSLNGRHLFGQPIKVNWAYASG--QREDTSGHFNIFVGDLSPEVTDATLFACFSVYPS 167
A+ +LNGR + I+VNWAY S +EDTS HF+IFVGDLS EV D L FS + S
Sbjct: 150 AMQTLNGRRIHQSEIRVNWAYQSNSTNKEDTSNHFHIFVGDLSNEVNDEVLLQAFSAFGS 209
Query: 168 CSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNED 227
S+ARVMWD KTGRSRG+GFV+FR + DA A++ + G+WLGSR IRCNWA + +
Sbjct: 210 VSEARVMWDMKTGRSRGYGFVAFRERSDADKALSSMDGEWLGSRAIRCNWANQKGQPSIS 269
Query: 228 KQSSDAKSVVELTNGSSEDGKETTNTEA----PENNPQY-TTVYVGNLAPEVTQLDLHRH 282
+Q + A + T T ++ + PQ+ TT YVGNL P TQ DL
Sbjct: 270 QQQAMAAMGMTPTTAFGHHHFPTHGIQSYDMVVQQTPQWQTTCYVGNLTPYTTQTDLVPL 329
Query: 283 FHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSKPT 342
F + G + E R+Q D+GF F++ TH AA+AI N + G+ +KCSWG
Sbjct: 330 FQNF--GYVIETRLQADRGFAFIKMDTHENAAMAICQLNGYN---VNGRPLKCSWGKDRP 384
Query: 343 PPGTSSNPLPPPAAAPIPGLSAADLLAYERQIAMSKMGGVHALMHPQAQHPLKQAAMGVG 402
P G N G + + + GG A M PQ P ++ G
Sbjct: 385 PTGQFDN---------FSGQQSNSGFSSTPTPYFPQYGGPGAPMTPQGPTPTQRGWDQSG 435
Query: 403 SAG 405
AG
Sbjct: 436 MAG 438
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 85/208 (40%), Gaps = 47/208 (22%)
Query: 52 DPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKS----SYGFIHYFDRRSA 107
D S ++VG++ +V + +L + FS+ G V +++ K+ YGF+ + +R A
Sbjct: 179 DTSNHFHIFVGDLSNEVNDEVLLQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRERSDA 238
Query: 108 AMAILSLNGRHLFGQPIKVNWAYASGQREDTS---------------GHFNI-------- 144
A+ S++G L + I+ NWA GQ + GH +
Sbjct: 239 DKALSSMDGEWLGSRAIRCNWANQKGQPSISQQQAMAAMGMTPTTAFGHHHFPTHGIQSY 298
Query: 145 --------------FVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSF 190
+VG+L+P T L F + + R+ D RGF F+
Sbjct: 299 DMVVQQTPQWQTTCYVGNLTPYTTQTDLVPLFQNFGYVIETRLQAD------RGFAFIKM 352
Query: 191 RNQQDAQSAINDLTGKWLGSRQIRCNWA 218
++A AI L G + R ++C+W
Sbjct: 353 DTHENAAMAICQLNGYNVNGRPLKCSWG 380
>gi|134077058|emb|CAK39931.1| unnamed protein product [Aspergillus niger]
Length = 497
Score = 228 bits (582), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 130/307 (42%), Positives = 179/307 (58%), Gaps = 20/307 (6%)
Query: 57 RSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKS-------SYGFIHYFDRRSAAM 109
R++YVG + +VTE +L+++F +TG V K+I DK+ +YGF+ + D +A
Sbjct: 91 RALYVGGLDPRVTEDILKQIFETTGHVVSVKII-PDKNKFNSKGYNYGFVEFDDPGAAER 149
Query: 110 AILSLNGRHLFGQPIKVNWAYASG--QREDTSGHFNIFVGDLSPEVTDATLFACFSVYPS 167
A+ +LNGR + I+VNWAY S +EDTS HF+IFVGDLS EV D L FS + S
Sbjct: 150 AMQTLNGRRIHQSEIRVNWAYQSNSTNKEDTSNHFHIFVGDLSNEVNDEVLLQAFSAFGS 209
Query: 168 CSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNED 227
S+ARVMWD KTGRSRG+GFV+FR + DA A++ + G+WLGSR IRCNWA + +
Sbjct: 210 VSEARVMWDMKTGRSRGYGFVAFRERSDADKALSSMDGEWLGSRAIRCNWANQKGQPSIS 269
Query: 228 KQSSDAKSVVELTNGSSEDGKETTNTEA----PENNPQY-TTVYVGNLAPEVTQLDLHRH 282
+Q + A + T T ++ + PQ+ TT YVGNL P TQ DL
Sbjct: 270 QQQAMAAMGMTPTTAFGHHHFPTHGIQSYDMVVQQTPQWQTTCYVGNLTPYTTQTDLVPL 329
Query: 283 FHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSKPT 342
F + G + E R+Q D+GF F++ TH AA+AI N + G+ +KCSWG
Sbjct: 330 FQNF--GYVIETRLQADRGFAFIKMDTHENAAMAICQLNGYN---VNGRPLKCSWGKDRP 384
Query: 343 PPGTSSN 349
P G N
Sbjct: 385 PTGQFDN 391
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 85/208 (40%), Gaps = 47/208 (22%)
Query: 52 DPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKS----SYGFIHYFDRRSA 107
D S ++VG++ +V + +L + FS+ G V +++ K+ YGF+ + +R A
Sbjct: 179 DTSNHFHIFVGDLSNEVNDEVLLQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRERSDA 238
Query: 108 AMAILSLNGRHLFGQPIKVNWAYASGQREDTS---------------GHFNI-------- 144
A+ S++G L + I+ NWA GQ + GH +
Sbjct: 239 DKALSSMDGEWLGSRAIRCNWANQKGQPSISQQQAMAAMGMTPTTAFGHHHFPTHGIQSY 298
Query: 145 --------------FVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSF 190
+VG+L+P T L F + + R+ D RGF F+
Sbjct: 299 DMVVQQTPQWQTTCYVGNLTPYTTQTDLVPLFQNFGYVIETRLQAD------RGFAFIKM 352
Query: 191 RNQQDAQSAINDLTGKWLGSRQIRCNWA 218
++A AI L G + R ++C+W
Sbjct: 353 DTHENAAMAICQLNGYNVNGRPLKCSWG 380
>gi|317030432|ref|XP_001392545.2| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Aspergillus niger CBS 513.88]
Length = 478
Score = 228 bits (581), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 130/307 (42%), Positives = 179/307 (58%), Gaps = 20/307 (6%)
Query: 57 RSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKS-------SYGFIHYFDRRSAAM 109
R++YVG + +VTE +L+++F +TG V K+I DK+ +YGF+ + D +A
Sbjct: 91 RALYVGGLDPRVTEDILKQIFETTGHVVSVKII-PDKNKFNSKGYNYGFVEFDDPGAAER 149
Query: 110 AILSLNGRHLFGQPIKVNWAYASG--QREDTSGHFNIFVGDLSPEVTDATLFACFSVYPS 167
A+ +LNGR + I+VNWAY S +EDTS HF+IFVGDLS EV D L FS + S
Sbjct: 150 AMQTLNGRRIHQSEIRVNWAYQSNSTNKEDTSNHFHIFVGDLSNEVNDEVLLQAFSAFGS 209
Query: 168 CSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNED 227
S+ARVMWD KTGRSRG+GFV+FR + DA A++ + G+WLGSR IRCNWA + +
Sbjct: 210 VSEARVMWDMKTGRSRGYGFVAFRERSDADKALSSMDGEWLGSRAIRCNWANQKGQPSIS 269
Query: 228 KQSSDAKSVVELTNGSSEDGKETTNTEA----PENNPQY-TTVYVGNLAPEVTQLDLHRH 282
+Q + A + T T ++ + PQ+ TT YVGNL P TQ DL
Sbjct: 270 QQQAMAAMGMTPTTAFGHHHFPTHGIQSYDMVVQQTPQWQTTCYVGNLTPYTTQTDLVPL 329
Query: 283 FHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSKPT 342
F + G + E R+Q D+GF F++ TH AA+AI N + G+ +KCSWG
Sbjct: 330 FQNF--GYVIETRLQADRGFAFIKMDTHENAAMAICQLNGYN---VNGRPLKCSWGKDRP 384
Query: 343 PPGTSSN 349
P G N
Sbjct: 385 PTGQFDN 391
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 85/208 (40%), Gaps = 47/208 (22%)
Query: 52 DPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKS----SYGFIHYFDRRSA 107
D S ++VG++ +V + +L + FS+ G V +++ K+ YGF+ + +R A
Sbjct: 179 DTSNHFHIFVGDLSNEVNDEVLLQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRERSDA 238
Query: 108 AMAILSLNGRHLFGQPIKVNWAYASGQREDTS---------------GHFNI-------- 144
A+ S++G L + I+ NWA GQ + GH +
Sbjct: 239 DKALSSMDGEWLGSRAIRCNWANQKGQPSISQQQAMAAMGMTPTTAFGHHHFPTHGIQSY 298
Query: 145 --------------FVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSF 190
+VG+L+P T L F + + R+ D RGF F+
Sbjct: 299 DMVVQQTPQWQTTCYVGNLTPYTTQTDLVPLFQNFGYVIETRLQAD------RGFAFIKM 352
Query: 191 RNQQDAQSAINDLTGKWLGSRQIRCNWA 218
++A AI L G + R ++C+W
Sbjct: 353 DTHENAAMAICQLNGYNVNGRPLKCSWG 380
>gi|367026720|ref|XP_003662644.1| hypothetical protein MYCTH_2303522 [Myceliophthora thermophila ATCC
42464]
gi|347009913|gb|AEO57399.1| hypothetical protein MYCTH_2303522 [Myceliophthora thermophila ATCC
42464]
Length = 500
Score = 228 bits (581), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 130/304 (42%), Positives = 177/304 (58%), Gaps = 29/304 (9%)
Query: 57 RSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS----YGFIHYFDRRSAAMAIL 112
R++YVG + +VTE +L+++F +TG V+ K+I DK++ YGF+ Y D +A A+
Sbjct: 90 RALYVGGLDPRVTEDVLRQIFETTGHVQSVKII-PDKNAKGYNYGFVEYDDPGAAERAMQ 148
Query: 113 SLNGRHLFGQPIKVNWAYASGQ--REDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSD 170
+LNGR + I+VNWAY S +EDTS HF+IFVGDLS EV D LF FS + S S+
Sbjct: 149 TLNGRRVHQSEIRVNWAYQSNNSNKEDTSNHFHIFVGDLSNEVNDEVLFQAFSAFGSISE 208
Query: 171 ARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQS 230
ARVMWD KTGRSRG+GFV+FR + DA+ A++ + G+WLGSR IRCNWA N+ Q
Sbjct: 209 ARVMWDMKTGRSRGYGFVAFRERADAEKALSSMDGEWLGSRAIRCNWA------NQKGQP 262
Query: 231 SDAKSVVELTNGSS-----------EDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDL 279
S A+ G + G + + + TT YVGNL P TQ D+
Sbjct: 263 SIAQQQAMQQMGMTPTTPYGHHHFPTHGVHSYDMVVNQTPAWQTTCYVGNLTPYTTQTDI 322
Query: 280 HRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGS 339
F + G + E R Q D+GF F++ TH AA+AI N + G+ +KCSWG
Sbjct: 323 VPLFQNF--GFVVESRFQADRGFAFIKMDTHENAAMAICQLNGYN---VNGRPLKCSWGK 377
Query: 340 KPTP 343
TP
Sbjct: 378 DKTP 381
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 84/208 (40%), Gaps = 47/208 (22%)
Query: 52 DPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKS----SYGFIHYFDRRSA 107
D S ++VG++ +V + +L + FS+ G + +++ K+ YGF+ + +R A
Sbjct: 175 DTSNHFHIFVGDLSNEVNDEVLFQAFSAFGSISEARVMWDMKTGRSRGYGFVAFRERADA 234
Query: 108 AMAILSLNGRHLFGQPIKVNWAYASGQREDTS---------------GHFNI-------- 144
A+ S++G L + I+ NWA GQ GH +
Sbjct: 235 EKALSSMDGEWLGSRAIRCNWANQKGQPSIAQQQAMQQMGMTPTTPYGHHHFPTHGVHSY 294
Query: 145 --------------FVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSF 190
+VG+L+P T + F + ++R D RGF F+
Sbjct: 295 DMVVNQTPAWQTTCYVGNLTPYTTQTDIVPLFQNFGFVVESRFQAD------RGFAFIKM 348
Query: 191 RNQQDAQSAINDLTGKWLGSRQIRCNWA 218
++A AI L G + R ++C+W
Sbjct: 349 DTHENAAMAICQLNGYNVNGRPLKCSWG 376
>gi|212538447|ref|XP_002149379.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Talaromyces marneffei ATCC 18224]
gi|210069121|gb|EEA23212.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Talaromyces marneffei ATCC 18224]
Length = 482
Score = 228 bits (581), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 132/308 (42%), Positives = 181/308 (58%), Gaps = 31/308 (10%)
Query: 57 RSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKS------SYGFIHYFDRRSAAMA 110
R++Y+G + +VTE +L+++F +TG V+ K+I DK+ +YGF+ Y D +A A
Sbjct: 91 RALYIGGLDARVTEDILKQIFETTGHVQSVKII-PDKNFQSKGMNYGFVEYDDPGAAERA 149
Query: 111 ILSLNGRHLFGQPIKVNWAYASG--QREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSC 168
+ +LNGR + I+VNWAY S +EDTS HF+IFVGDLS EV D L FS + S
Sbjct: 150 MQTLNGRRIHQSEIRVNWAYQSNNTHKEDTSNHFHIFVGDLSNEVNDEVLLQAFSAFGSV 209
Query: 169 SDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT-KGAGNNED 227
S+ARVMWD KTGRSRG+GFV+FR +DA+ A+ + +WLGSR IRCNWA KG +
Sbjct: 210 SEARVMWDMKTGRSRGYGFVAFREFEDAEKALKSMDREWLGSRAIRCNWANQKGQPSISQ 269
Query: 228 KQSSDAKSVVEL---------TNGSSEDGKETTNTEAPENNPQY-TTVYVGNLAPEVTQL 277
+Q+ A + T+G++ T PQ+ TT YVGNL P TQ
Sbjct: 270 QQAMAAMGMTPTAPFGHHHFPTHGANSYDMVVAQT------PQWQTTCYVGNLTPYTTQN 323
Query: 278 DLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSW 337
DL F + G + E R+Q D+GF F++ TH AA+AI N Q + G+ +KCSW
Sbjct: 324 DLVPLFQNF--GYVVETRLQADRGFAFLKMDTHENAAMAICQLNGYQ---VNGRPLKCSW 378
Query: 338 GSKPTPPG 345
G P G
Sbjct: 379 GKDRPPTG 386
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 83/208 (39%), Gaps = 47/208 (22%)
Query: 52 DPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKS----SYGFIHYFDRRSA 107
D S ++VG++ +V + +L + FS+ G V +++ K+ YGF+ + + A
Sbjct: 178 DTSNHFHIFVGDLSNEVNDEVLLQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFREFEDA 237
Query: 108 AMAILSLNGRHLFGQPIKVNWAYASGQREDTS---------------GHFNI-------- 144
A+ S++ L + I+ NWA GQ + GH +
Sbjct: 238 EKALKSMDREWLGSRAIRCNWANQKGQPSISQQQAMAAMGMTPTAPFGHHHFPTHGANSY 297
Query: 145 --------------FVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSF 190
+VG+L+P T L F + + R+ D RGF F+
Sbjct: 298 DMVVAQTPQWQTTCYVGNLTPYTTQNDLVPLFQNFGYVVETRLQAD------RGFAFLKM 351
Query: 191 RNQQDAQSAINDLTGKWLGSRQIRCNWA 218
++A AI L G + R ++C+W
Sbjct: 352 DTHENAAMAICQLNGYQVNGRPLKCSWG 379
>gi|336469273|gb|EGO57435.1| hypothetical protein NEUTE1DRAFT_129383 [Neurospora tetrasperma
FGSC 2508]
Length = 494
Score = 228 bits (580), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 146/369 (39%), Positives = 195/369 (52%), Gaps = 44/369 (11%)
Query: 57 RSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLI-------------RKDKS----SYGFI 99
R++YVG + +VTE +L+++F +TG V+ K+I R +K +YGF+
Sbjct: 91 RALYVGGLDPRVTEDVLRQIFETTGHVQNVKIIPDKNVGKPGSEQPRDEKQQKGYNYGFV 150
Query: 100 HYFDRRSAAMAILSLNGRHLFGQPIKVNWAYASGQ--REDTSGHFNIFVGDLSPEVTDAT 157
Y D +A A+ +LNGR + I+VNWAY S +EDTSGHF+IFVGDLS EV D
Sbjct: 151 EYDDPGAAERAMQTLNGRRVHQSEIRVNWAYQSNNQNKEDTSGHFHIFVGDLSNEVNDEV 210
Query: 158 LFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNW 217
L FS + S S+ARVMWD KTGRSRG+GFV+FR++ DA+ A++ + G+WLGSR IRCNW
Sbjct: 211 LLQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRDRPDAEKALSSMDGEWLGSRAIRCNW 270
Query: 218 ATKGAGNNEDKQSSDAKSVVELTNGSSED-----------GKETTNTEAPENNPQYTTVY 266
A N+ Q S A+ G + G + + + TT Y
Sbjct: 271 A------NQKGQPSIAQQQAMQQMGLTPTTPYGHHHFPTHGVHSYDMIVAQTPAWQTTCY 324
Query: 267 VGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSS 326
VGNL P TQ DL F + G + E R Q D+GF F++ TH AA+AI N Q
Sbjct: 325 VGNLTPYTTQNDLVPLFQNF--GYVVESRFQADRGFAFIKMDTHENAAMAICQLNGYQ-- 380
Query: 327 YLFGKQMKCSWGSKPTPPGTSSNPLPP--PAAAPIPGLSAADLLAYERQIAMSKMGGVHA 384
+ G+ +KCSWG TP +P P P +A PG Y S G
Sbjct: 381 -VNGRPLKCSWGKDKTPNPQQFDPNQPYSPQSAQTPGYPGTP-STYFNNYGNSYPGQQGN 438
Query: 385 LMHPQAQHP 393
PQAQ P
Sbjct: 439 YNGPQAQSP 447
>gi|320585953|gb|EFW98632.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Grosmannia clavigera kw1407]
Length = 488
Score = 228 bits (580), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 146/366 (39%), Positives = 201/366 (54%), Gaps = 29/366 (7%)
Query: 57 RSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS----YGFIHYFDRRSAAMAIL 112
R++YVG + +VTE +L+++F +TG V+ K+I DK++ YGF+ Y D +A A+
Sbjct: 87 RALYVGGLDQRVTEDVLRQIFETTGHVQNVKII-PDKNAKGYNYGFVEYDDPGAAERAMQ 145
Query: 113 SLNGRHLFGQPIKVNWAYASG--QREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSD 170
+LNGR + I+VNWAY S +EDTSGHF+IFVGDLS EV D L F+ + S S+
Sbjct: 146 NLNGRRVHQSEIRVNWAYQSNTTSKEDTSGHFHIFVGDLSNEVNDEVLTQAFTSFGSVSE 205
Query: 171 ARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQS 230
ARVMWD KTGRSRG+GFV+FR++ DA+ A++ + G+WLGSR IRCNWA + + +Q
Sbjct: 206 ARVMWDMKTGRSRGYGFVAFRDRPDAEKALSSMDGEWLGSRAIRCNWANQKGQPSMAQQQ 265
Query: 231 SDAKSVVELTNGSSEDGKETTNTEAPE----NNPQY-TTVYVGNLAPEVTQLDLHRHFHS 285
+ + + T T + E P + TT YVGNL P TQ DL F +
Sbjct: 266 ALQQVGMTPTTPFGHHHFPTQGINSYEMVINQTPAWQTTCYVGNLTPYTTQNDLVPLFQN 325
Query: 286 LGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSKPTP-- 343
G + E R Q D+GF F++ +H AA+AI N + G+ +KCSWG TP
Sbjct: 326 F--GYVVESRFQSDRGFAFIKLDSHENAAMAICQLNGYN---VNGRPLKCSWGKDKTPNA 380
Query: 344 ----PGTSS--NPLPPPAAAPIPGLSAADLLAYERQIAMSKMGGVHALMHPQAQHPL--- 394
P S +P A P PG Y Q + G + P AQ P+
Sbjct: 381 QGFDPSQQSYGSPQSAQAPGPYPGSPTTYFPQYGAQYGNGQQSGNYG-GPPTAQSPVGYG 439
Query: 395 KQAAMG 400
QA MG
Sbjct: 440 GQAPMG 445
>gi|242806685|ref|XP_002484795.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Talaromyces stipitatus ATCC 10500]
gi|218715420|gb|EED14842.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Talaromyces stipitatus ATCC 10500]
Length = 482
Score = 227 bits (579), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 132/308 (42%), Positives = 181/308 (58%), Gaps = 31/308 (10%)
Query: 57 RSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKS------SYGFIHYFDRRSAAMA 110
R++Y+G + +VTE +L+++F +TG V+ K+I DK+ +YGF+ Y D +A A
Sbjct: 92 RALYIGGLDARVTEDILKQIFETTGHVQSVKII-PDKNFQSKGMNYGFVEYDDPGAAERA 150
Query: 111 ILSLNGRHLFGQPIKVNWAYASG--QREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSC 168
+ +LNGR + I+VNWAY S +EDTS HF+IFVGDLS EV D L FS + S
Sbjct: 151 MQTLNGRRIHQSEIRVNWAYQSNNSHKEDTSNHFHIFVGDLSNEVNDEVLLQAFSAFGSV 210
Query: 169 SDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT-KGAGNNED 227
S+ARVMWD KTGRSRG+GFV+FR +DA+ A+ + +WLGSR IRCNWA KG +
Sbjct: 211 SEARVMWDMKTGRSRGYGFVAFREFEDAEKALKSMDREWLGSRAIRCNWANQKGQPSISQ 270
Query: 228 KQSSDAKSVVEL---------TNGSSEDGKETTNTEAPENNPQY-TTVYVGNLAPEVTQL 277
+Q+ A + T+G++ T PQ+ TT YVGNL P TQ
Sbjct: 271 QQAMAAMGMTPSAPFGHHHFPTHGANSYDMVVAQT------PQWQTTCYVGNLTPYTTQN 324
Query: 278 DLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSW 337
DL F + G + E R+Q D+GF F++ TH AA+AI N Q + G+ +KCSW
Sbjct: 325 DLVPLFQNF--GYVVETRLQADRGFAFLKMDTHENAAMAICQLNGYQ---VNGRPLKCSW 379
Query: 338 GSKPTPPG 345
G P G
Sbjct: 380 GKDRPPTG 387
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 83/208 (39%), Gaps = 47/208 (22%)
Query: 52 DPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKS----SYGFIHYFDRRSA 107
D S ++VG++ +V + +L + FS+ G V +++ K+ YGF+ + + A
Sbjct: 179 DTSNHFHIFVGDLSNEVNDEVLLQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFREFEDA 238
Query: 108 AMAILSLNGRHLFGQPIKVNWAYASGQREDTS---------------GHFNI-------- 144
A+ S++ L + I+ NWA GQ + GH +
Sbjct: 239 EKALKSMDREWLGSRAIRCNWANQKGQPSISQQQAMAAMGMTPSAPFGHHHFPTHGANSY 298
Query: 145 --------------FVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSF 190
+VG+L+P T L F + + R+ D RGF F+
Sbjct: 299 DMVVAQTPQWQTTCYVGNLTPYTTQNDLVPLFQNFGYVVETRLQAD------RGFAFLKM 352
Query: 191 RNQQDAQSAINDLTGKWLGSRQIRCNWA 218
++A AI L G + R ++C+W
Sbjct: 353 DTHENAAMAICQLNGYQVNGRPLKCSWG 380
>gi|407927556|gb|EKG20446.1| hypothetical protein MPH_02256 [Macrophomina phaseolina MS6]
Length = 485
Score = 226 bits (577), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 128/303 (42%), Positives = 177/303 (58%), Gaps = 20/303 (6%)
Query: 57 RSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKS-------SYGFIHYFDRRSAAM 109
R++YVG + ++TE +L+++F + G V K+I DK+ +YGF+ Y D +A
Sbjct: 87 RALYVGGLDPRITEDVLRQIFETAGHVVSVKII-PDKNKFQSKGLNYGFVEYDDPGTAER 145
Query: 110 AILSLNGRHLFGQPIKVNWAYASGQ--REDTSGHFNIFVGDLSPEVTDATLFACFSVYPS 167
A+ +LNGR + I+VNWAY S +EDTS HF+IFVGDLS EV D L FS +
Sbjct: 146 AMQTLNGRRVHQSEIRVNWAYQSNNQPKEDTSNHFHIFVGDLSNEVNDEVLLQAFSAFGQ 205
Query: 168 CSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNED 227
S+ARVMWD KTGRSRG+GFV+FR++ DA+ A++ + G+WLGSR IRCNWA + +
Sbjct: 206 VSEARVMWDMKTGRSRGYGFVAFRDRGDAEKALSSMDGEWLGSRAIRCNWANQKGQPSIS 265
Query: 228 KQSSDAKSVVELTNGSSEDGKETTNTEAPE----NNPQY-TTVYVGNLAPEVTQLDLHRH 282
+Q + A + T T ++ E PQ+ TT YVGNL P TQ DL
Sbjct: 266 QQQAMASMGMTPTTPYGHHHFPTHGVQSYEMVVNQTPQWQTTCYVGNLTPYTTQSDLVPL 325
Query: 283 FHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSKPT 342
F + G + E R Q D+GF F++ TH AA+AI N + G+ +KCSWG
Sbjct: 326 FQNF--GYVVETRFQSDRGFAFIKMDTHENAAMAICQLNGYN---VNGRPLKCSWGKDRP 380
Query: 343 PPG 345
P G
Sbjct: 381 PTG 383
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 86/211 (40%), Gaps = 47/211 (22%)
Query: 49 PGFDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKS----SYGFIHYFDR 104
P D S ++VG++ +V + +L + FS+ G V +++ K+ YGF+ + DR
Sbjct: 172 PKEDTSNHFHIFVGDLSNEVNDEVLLQAFSAFGQVSEARVMWDMKTGRSRGYGFVAFRDR 231
Query: 105 RSAAMAILSLNGRHLFGQPIKVNWAYASGQREDTS---------------GHFNI----- 144
A A+ S++G L + I+ NWA GQ + GH +
Sbjct: 232 GDAEKALSSMDGEWLGSRAIRCNWANQKGQPSISQQQAMASMGMTPTTPYGHHHFPTHGV 291
Query: 145 -----------------FVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGF 187
+VG+L+P T + L F + + R D RGF F
Sbjct: 292 QSYEMVVNQTPQWQTTCYVGNLTPYTTQSDLVPLFQNFGYVVETRFQSD------RGFAF 345
Query: 188 VSFRNQQDAQSAINDLTGKWLGSRQIRCNWA 218
+ ++A AI L G + R ++C+W
Sbjct: 346 IKMDTHENAAMAICQLNGYNVNGRPLKCSWG 376
>gi|345571041|gb|EGX53856.1| hypothetical protein AOL_s00004g515 [Arthrobotrys oligospora ATCC
24927]
Length = 496
Score = 226 bits (576), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 131/301 (43%), Positives = 182/301 (60%), Gaps = 19/301 (6%)
Query: 57 RSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS----YGFIHYFDRRSAAMAIL 112
R++YVG + +VT+ +L+++F +TG V K+I DK++ YGF+ Y D +A A+
Sbjct: 78 RALYVGGLDPRVTDDILRQIFETTGHVVSVKII-PDKNAKGFNYGFVEYDDPGAAERAMQ 136
Query: 113 SLNGRHLFGQPIKVNWAYASGQ--REDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSD 170
+LNGR + I+VNWAY S Q +EDTS HF+IFVGDLS EV D L F+ + + S+
Sbjct: 137 TLNGRRVHQSEIRVNWAYQSSQAAKEDTSHHFHIFVGDLSNEVNDELLQQAFTTFGTISE 196
Query: 171 ARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQS 230
ARVMWD KTGRSRG+GFV++R + DA+ A++ + G+WLGSR IRCNWA + + +QS
Sbjct: 197 ARVMWDMKTGRSRGYGFVAYRERSDAEKALSAMDGEWLGSRAIRCNWANQKGQPSISQQS 256
Query: 231 SDAKSVVELTNGSSEDGKETTNTEA----PENNPQY-TTVYVGNLAPEVTQLDLHRHFHS 285
A+ + T T ++ + PQ+ TTVYVGNL P TQ DL F +
Sbjct: 257 QMAQMGMTPTTPFGHHHFPTHGIQSYDMIVQQTPQWQTTVYVGNLTPYTTQNDLLPLFQN 316
Query: 286 LGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSY-LFGKQMKCSWGSKPTPP 344
G I E R Q D+GF F++ TH AA+AI S Y + G+ +KCSWG P
Sbjct: 317 F--GYIVETRFQADRGFAFIKMDTHENAAMAI----CQLSGYNVNGRPLKCSWGKDRPPT 370
Query: 345 G 345
G
Sbjct: 371 G 371
>gi|259488599|tpe|CBF88164.1| TPA: nuclear and cytoplasmic polyadenylated RNA-binding protein
pub1 (AFU_orthologue; AFUA_1G12000) [Aspergillus
nidulans FGSC A4]
Length = 477
Score = 226 bits (575), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 136/346 (39%), Positives = 186/346 (53%), Gaps = 26/346 (7%)
Query: 57 RSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLI-----RKDKSSYGFIHYFDRRSAAMAI 111
R++YVG + +VTE +L+++F +TG V K+I ++YGF+ + D +A A+
Sbjct: 90 RALYVGGLDPRVTEDILKQIFETTGHVISVKIIPDKNFNSKGANYGFVEFDDPGAAERAM 149
Query: 112 LSLNGRHLFGQPIKVNWAYAS--GQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCS 169
+LNGR + I+VNWAY S +EDTS HF+IFVGDLS EV D L FS + S S
Sbjct: 150 QTLNGRRIHQSEIRVNWAYQSNTANKEDTSNHFHIFVGDLSNEVNDEVLLQAFSAFGSVS 209
Query: 170 DARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT-KGAGNNEDK 228
+ARVMWD KTGRSRG+GFV+FR + DA+ A+ + G+WLGSR IRCNWA KG + +
Sbjct: 210 EARVMWDMKTGRSRGYGFVAFRERADAEKALTSMDGEWLGSRAIRCNWANQKGQPSISQQ 269
Query: 229 QSSDAKSVVELT----NGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFH 284
Q+ A + T + G ++ + + TT YVGNL P TQ D+ F
Sbjct: 270 QAMAAMGMTPTTPFGHHHFPTHGIQSYDMVVQQTPAWQTTCYVGNLTPYTTQNDIVPLFQ 329
Query: 285 SLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSKPTPP 344
+ G + E R+Q D+GF F++ TH AA AI N + G+ +KCSWG P
Sbjct: 330 NF--GYVIETRMQADRGFAFIKMDTHENAASAICQLNGYN---VNGRPLKCSWGKDRPPT 384
Query: 345 GTSSNPLPPPAAAPIPGLSAADLLAYERQIAMSKMGGVHALMHPQA 390
G N PG A A + GG M PQ
Sbjct: 385 GQFDN---------FPGQQANSPFASSPGPYFPQYGGPGGPMTPQG 421
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 86/208 (41%), Gaps = 47/208 (22%)
Query: 52 DPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKS----SYGFIHYFDRRSA 107
D S ++VG++ +V + +L + FS+ G V +++ K+ YGF+ + +R A
Sbjct: 177 DTSNHFHIFVGDLSNEVNDEVLLQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRERADA 236
Query: 108 AMAILSLNGRHLFGQPIKVNWAYASGQREDTS---------------GHFNI-------- 144
A+ S++G L + I+ NWA GQ + GH +
Sbjct: 237 EKALTSMDGEWLGSRAIRCNWANQKGQPSISQQQAMAAMGMTPTTPFGHHHFPTHGIQSY 296
Query: 145 --------------FVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSF 190
+VG+L+P T + F + + R+ D RGF F+
Sbjct: 297 DMVVQQTPAWQTTCYVGNLTPYTTQNDIVPLFQNFGYVIETRMQAD------RGFAFIKM 350
Query: 191 RNQQDAQSAINDLTGKWLGSRQIRCNWA 218
++A SAI L G + R ++C+W
Sbjct: 351 DTHENAASAICQLNGYNVNGRPLKCSWG 378
>gi|115491713|ref|XP_001210484.1| hypothetical protein ATEG_00398 [Aspergillus terreus NIH2624]
gi|114197344|gb|EAU39044.1| hypothetical protein ATEG_00398 [Aspergillus terreus NIH2624]
Length = 478
Score = 226 bits (575), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 130/308 (42%), Positives = 183/308 (59%), Gaps = 22/308 (7%)
Query: 57 RSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKS-------SYGFIHYFDRRSAAM 109
R++YVG + +VTE +L+++F +TG V K+I DK+ +YGF+ + D +A
Sbjct: 91 RALYVGGLDPRVTEDILKQIFETTGHVVSVKII-PDKNKFNSKGYNYGFVEFDDPGAAER 149
Query: 110 AILSLNGRHLFGQPIKVNWAYASGQ--REDTSGHFNIFVGDLSPEVTDATLFACFSVYPS 167
A+ +LNGR + I+VNWAY S +EDTS HF+IFVGDLS EV D L FS + S
Sbjct: 150 AMQTLNGRRIHQSEIRVNWAYQSNNTNKEDTSNHFHIFVGDLSNEVNDEILLQAFSAFGS 209
Query: 168 CSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT-KGAGNNE 226
S+ARVMWD KTGRSRG+GFV+FR + DA+ A++ + G+WLGSR IRCNWA KG +
Sbjct: 210 VSEARVMWDMKTGRSRGYGFVAFRERSDAEKALSSMDGEWLGSRAIRCNWANQKGQPSIS 269
Query: 227 DKQSSDAKSVVELT----NGSSEDGKETTNTEAPENNPQY-TTVYVGNLAPEVTQLDLHR 281
+Q+ A + T + G ++ + + PQ+ TT YVGNL P +Q DL
Sbjct: 270 QQQAMAAMGMTPTTPFGHHHFPTHGMQSYDMVV-QQTPQWQTTCYVGNLTPYTSQNDLVP 328
Query: 282 HFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSKP 341
F + G + E R+Q D+GF F++ +H AA+AI N + G+ +KCSWG
Sbjct: 329 LFQNF--GFVLETRLQADRGFAFIKMDSHENAAMAICQLNGYN---VNGRPLKCSWGKDR 383
Query: 342 TPPGTSSN 349
P G N
Sbjct: 384 PPTGQFDN 391
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 86/208 (41%), Gaps = 47/208 (22%)
Query: 52 DPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKS----SYGFIHYFDRRSA 107
D S ++VG++ +V + +L + FS+ G V +++ K+ YGF+ + +R A
Sbjct: 179 DTSNHFHIFVGDLSNEVNDEILLQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRERSDA 238
Query: 108 AMAILSLNGRHLFGQPIKVNWAYASGQREDTS---------------GHFNI-------- 144
A+ S++G L + I+ NWA GQ + GH +
Sbjct: 239 EKALSSMDGEWLGSRAIRCNWANQKGQPSISQQQAMAAMGMTPTTPFGHHHFPTHGMQSY 298
Query: 145 --------------FVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSF 190
+VG+L+P + L F + + R+ D RGF F+
Sbjct: 299 DMVVQQTPQWQTTCYVGNLTPYTSQNDLVPLFQNFGFVLETRLQAD------RGFAFIKM 352
Query: 191 RNQQDAQSAINDLTGKWLGSRQIRCNWA 218
+ ++A AI L G + R ++C+W
Sbjct: 353 DSHENAAMAICQLNGYNVNGRPLKCSWG 380
>gi|342870153|gb|EGU73450.1| hypothetical protein FOXB_16088 [Fusarium oxysporum Fo5176]
Length = 474
Score = 225 bits (573), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 129/307 (42%), Positives = 177/307 (57%), Gaps = 35/307 (11%)
Query: 57 RSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS----YGFIHYFDRRSAAMAIL 112
R++Y+G + +VTE +L+++F +TG V+ K+I DK++ YGF+ Y D +A A+
Sbjct: 84 RALYIGGLDQRVTEEVLRQIFETTGHVQNVKII-PDKNARGYNYGFVEYDDPGAAERAMQ 142
Query: 113 SLNGRHLFGQPIKVNWAYASG--QREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSD 170
+LNGR + I+VNWAY S +EDTS HF+IFVGDLS EV D L FS + S S+
Sbjct: 143 TLNGRRVHQSEIRVNWAYQSNTTNKEDTSNHFHIFVGDLSNEVNDEVLLQAFSAFGSVSE 202
Query: 171 ARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQS 230
ARVMWD KTGRSRG+GFV+FR++ +A+ A++ + G+WLGSR IRCNWA N+ Q
Sbjct: 203 ARVMWDMKTGRSRGYGFVAFRDRPEAEKALSSMDGEWLGSRAIRCNWA------NQKGQP 256
Query: 231 SDAKSVVELTNGSSED--------------GKETTNTEAPENNPQYTTVYVGNLAPEVTQ 276
S A+ G + E T+ P TTVYVGNL P T
Sbjct: 257 SMAQQQAMQAMGMTPTTPYGHHQFPAHGVASYEVILTQTPS---WQTTVYVGNLTPYTTP 313
Query: 277 LDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCS 336
D+ F + G + E R Q D+GF F++ TH AA+AI N + G+ +KCS
Sbjct: 314 NDVVPLFQNF--GFVVESRFQADRGFAFIKMDTHENAAMAICQMNGYN---VNGRPLKCS 368
Query: 337 WGSKPTP 343
WG TP
Sbjct: 369 WGKDKTP 375
>gi|330933733|ref|XP_003304275.1| hypothetical protein PTT_16807 [Pyrenophora teres f. teres 0-1]
gi|311319203|gb|EFQ87630.1| hypothetical protein PTT_16807 [Pyrenophora teres f. teres 0-1]
Length = 485
Score = 225 bits (573), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 125/306 (40%), Positives = 175/306 (57%), Gaps = 22/306 (7%)
Query: 57 RSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS----------YGFIHYFDRRS 106
R++YVG + +VTE +L+++F +TG V+ K+I +S YGF+ Y D +
Sbjct: 83 RALYVGGLDPRVTEDVLRQIFETTGHVQSVKIIPDKTASSPSFNSKGFNYGFVEYDDPGA 142
Query: 107 AAMAILSLNGRHLFGQPIKVNWAYASGQ--REDTSGHFNIFVGDLSPEVTDATLFACFSV 164
A + +LNGR + I+VNWAY S +EDTS HF+IFVGDLS EV D L FS
Sbjct: 143 AERGMATLNGRRIHNNEIRVNWAYQSNNTAKEDTSNHFHIFVGDLSNEVNDEVLLQAFST 202
Query: 165 YPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT-KGAG 223
+ S+ARVMWD KTGRSRG+GFV+FR++ DA A++ + G+WLGSR IRCNWA KG
Sbjct: 203 FGPVSEARVMWDMKTGRSRGYGFVAFRDRADADRALSSMDGEWLGSRAIRCNWANQKGQP 262
Query: 224 NNEDKQSSDAKSVVELT----NGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDL 279
+ +Q+ + + T + G ++ + + TT YVGNL P +Q DL
Sbjct: 263 SISQQQAMASMGMTPTTPFGHHHFPTHGVQSYDMVVSQTPAWQTTCYVGNLTPYTSQSDL 322
Query: 280 HRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGS 339
F + G + E R Q D+GF F++ TH AA+AI N + G+ +KCSWG
Sbjct: 323 VPLFQNF--GYVTETRFQSDRGFAFIKMDTHENAAMAICQLNGYN---VNGRPLKCSWGK 377
Query: 340 KPTPPG 345
P G
Sbjct: 378 DRPPTG 383
>gi|255934068|ref|XP_002558315.1| Pc12g15120 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211582934|emb|CAP81139.1| Pc12g15120 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 496
Score = 225 bits (573), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 134/310 (43%), Positives = 184/310 (59%), Gaps = 21/310 (6%)
Query: 57 RSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKS------SYGFIHYFDRRSAAMA 110
R++YVG + +VTE +L+++F +TG V K+I DK+ +YGF+ + D +A A
Sbjct: 91 RALYVGGLDPRVTEDILKQIFETTGHVVSVKII-PDKNFTTKGHNYGFVEFDDPGAAERA 149
Query: 111 ILSLNGRHLFGQPIKVNWAYASGQ--REDTSGHFNIFVGDLSPEVTDATLFACFSVYPSC 168
+ +LNGR + I+VNWAY S +EDTS HF+IFVGDLS EV D L FS + S
Sbjct: 150 MQTLNGRRIHQSEIRVNWAYQSNSTSKEDTSNHFHIFVGDLSNEVNDEVLTQAFSAFGSV 209
Query: 169 SDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT-KGAGNNED 227
S+ARVMWD KTGRSRG+GFV+FR++ +A A+N + G+WLGSR IRCNWA KG +
Sbjct: 210 SEARVMWDMKTGRSRGYGFVAFRDRAEADKALNSMDGEWLGSRAIRCNWANQKGQPSISQ 269
Query: 228 KQSSDAKSVVELT----NGSSEDGKETTNTEAPENNPQY-TTVYVGNLAPEVTQLDLHRH 282
+Q+ A + T + G ++ + A + PQ+ TT YVGNL P TQ DL
Sbjct: 270 QQALVAMGMTPTTPFGHHHFPTHGIQSYDMVA-QQTPQWQTTCYVGNLTPYTTQNDLVPL 328
Query: 283 FHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSKPT 342
F + G + E R+Q D+GF FV+ +H AA AI N + G+ +KCSWG
Sbjct: 329 FQNF--GYVLETRLQADRGFAFVKMDSHENAASAICQLNGYN---VNGRPLKCSWGKDRP 383
Query: 343 PPGTSSNPLP 352
P G N P
Sbjct: 384 PTGQFDNFSP 393
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 87/208 (41%), Gaps = 47/208 (22%)
Query: 52 DPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKS----SYGFIHYFDRRSA 107
D S ++VG++ +V + +L + FS+ G V +++ K+ YGF+ + DR A
Sbjct: 178 DTSNHFHIFVGDLSNEVNDEVLTQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRDRAEA 237
Query: 108 AMAILSLNGRHLFGQPIKVNWAYASGQREDTS---------------GHFNI-------- 144
A+ S++G L + I+ NWA GQ + GH +
Sbjct: 238 DKALNSMDGEWLGSRAIRCNWANQKGQPSISQQQALVAMGMTPTTPFGHHHFPTHGIQSY 297
Query: 145 --------------FVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSF 190
+VG+L+P T L F + + R+ D RGF FV
Sbjct: 298 DMVAQQTPQWQTTCYVGNLTPYTTQNDLVPLFQNFGYVLETRLQAD------RGFAFVKM 351
Query: 191 RNQQDAQSAINDLTGKWLGSRQIRCNWA 218
+ ++A SAI L G + R ++C+W
Sbjct: 352 DSHENAASAICQLNGYNVNGRPLKCSWG 379
>gi|367051094|ref|XP_003655926.1| hypothetical protein THITE_2120229 [Thielavia terrestris NRRL 8126]
gi|347003190|gb|AEO69590.1| hypothetical protein THITE_2120229 [Thielavia terrestris NRRL 8126]
Length = 500
Score = 225 bits (573), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 130/304 (42%), Positives = 176/304 (57%), Gaps = 29/304 (9%)
Query: 57 RSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS----YGFIHYFDRRSAAMAIL 112
R++YVG + +VTE +L+++F +TG V+ K+I DK++ YGF+ Y D +A A+
Sbjct: 90 RALYVGGLDPRVTEDVLRQIFETTGHVQSVKII-PDKNARGYNYGFVEYDDPGAAERAMQ 148
Query: 113 SLNGRHLFGQPIKVNWAYAS--GQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSD 170
+LNGR + I+VNWAY S +EDTS HF+IFVGDLS EV D L FS + S S+
Sbjct: 149 TLNGRRVHQSEIRVNWAYQSNNANKEDTSNHFHIFVGDLSNEVNDEVLLQAFSAFGSVSE 208
Query: 171 ARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQS 230
ARVMWD KTGRSRG+GFV+FR + DA+ A++ + G+WLGSR IRCNWA N+ Q
Sbjct: 209 ARVMWDMKTGRSRGYGFVAFRERADAEKALSSMDGEWLGSRAIRCNWA------NQKGQP 262
Query: 231 SDAKSVVELTNGSS-----------EDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDL 279
S A+ G + G + + + TT YVGNL P TQ D+
Sbjct: 263 SIAQQQAMQQMGLTPTTPYGHHHFPTHGIHSYDMIVNQTPAWQTTCYVGNLTPYTTQNDI 322
Query: 280 HRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGS 339
F + G + E R Q D+GF FV+ TH AA+AI N + G+ +KCSWG
Sbjct: 323 VPLFQNF--GFVVESRFQADRGFAFVKMDTHENAAMAICQLNGYN---VNGRPLKCSWGK 377
Query: 340 KPTP 343
TP
Sbjct: 378 DKTP 381
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 84/208 (40%), Gaps = 47/208 (22%)
Query: 52 DPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKS----SYGFIHYFDRRSA 107
D S ++VG++ +V + +L + FS+ G V +++ K+ YGF+ + +R A
Sbjct: 175 DTSNHFHIFVGDLSNEVNDEVLLQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRERADA 234
Query: 108 AMAILSLNGRHLFGQPIKVNWAYASGQREDTS---------------GHFNI-------- 144
A+ S++G L + I+ NWA GQ GH +
Sbjct: 235 EKALSSMDGEWLGSRAIRCNWANQKGQPSIAQQQAMQQMGLTPTTPYGHHHFPTHGIHSY 294
Query: 145 --------------FVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSF 190
+VG+L+P T + F + ++R D RGF FV
Sbjct: 295 DMIVNQTPAWQTTCYVGNLTPYTTQNDIVPLFQNFGFVVESRFQAD------RGFAFVKM 348
Query: 191 RNQQDAQSAINDLTGKWLGSRQIRCNWA 218
++A AI L G + R ++C+W
Sbjct: 349 DTHENAAMAICQLNGYNVNGRPLKCSWG 376
>gi|302904116|ref|XP_003049006.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256729940|gb|EEU43293.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 474
Score = 224 bits (572), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 130/307 (42%), Positives = 176/307 (57%), Gaps = 35/307 (11%)
Query: 57 RSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS----YGFIHYFDRRSAAMAIL 112
R++YVG + +VTE +L+++F +TG V+ K+I DK++ YGF+ Y D +A A+
Sbjct: 84 RALYVGGLDQRVTEDVLRQIFETTGHVQNVKII-PDKNARGYNYGFVEYDDPGAAERAMQ 142
Query: 113 SLNGRHLFGQPIKVNWAYASG--QREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSD 170
+LNGR + I+VNWAY S +EDTS HF+IFVGDLS EV D L FS + S S+
Sbjct: 143 TLNGRRVHQSEIRVNWAYQSNTSNKEDTSNHFHIFVGDLSNEVNDEVLLQAFSAFGSVSE 202
Query: 171 ARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQS 230
ARVMWD KTGRSRG+GFV+FR++ DA+ A++ + G+WLGSR IRCNWA N+ Q
Sbjct: 203 ARVMWDMKTGRSRGYGFVAFRDRPDAEKALSSMDGEWLGSRAIRCNWA------NQKGQP 256
Query: 231 SDAKSVVELTNGSSED--------------GKETTNTEAPENNPQYTTVYVGNLAPEVTQ 276
S A+ G + E T+ P TT YVGNL P T
Sbjct: 257 SMAQQQAMQAMGMTPTTPYGHHQFPAHGVASYEVILTQTPS---WQTTCYVGNLTPYTTP 313
Query: 277 LDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCS 336
D+ F + G + E R Q D+GF F++ TH AA+AI N + G+ +KCS
Sbjct: 314 NDVVPLFQNF--GFVVESRFQADRGFAFIKMDTHENAAMAICQMNGYN---VNGRPLKCS 368
Query: 337 WGSKPTP 343
WG TP
Sbjct: 369 WGKDKTP 375
>gi|425768240|gb|EKV06770.1| Nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Penicillium digitatum Pd1]
gi|425770410|gb|EKV08883.1| Nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Penicillium digitatum PHI26]
Length = 482
Score = 224 bits (572), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 134/312 (42%), Positives = 184/312 (58%), Gaps = 23/312 (7%)
Query: 57 RSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKS--------SYGFIHYFDRRSAA 108
R++YVG + +VTE +L+++F +TG V K+I DK+ +YGF+ + D +A
Sbjct: 91 RALYVGGLDPRVTEDILKQIFETTGHVVSVKII-PDKNGQFTTKGHNYGFVEFDDPGAAE 149
Query: 109 MAILSLNGRHLFGQPIKVNWAYASGQ--REDTSGHFNIFVGDLSPEVTDATLFACFSVYP 166
A+ +LNGR + I+VNWAY S +EDTS HF+IFVGDLS EV D L FS +
Sbjct: 150 RAMQTLNGRRIHQSEIRVNWAYQSNSTSKEDTSNHFHIFVGDLSNEVNDEVLTQAFSAFG 209
Query: 167 SCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT-KGAGNN 225
S S+ARVMWD KTGRSRG+GFV+FR++ +A A+N + G+WLGSR IRCNWA KG +
Sbjct: 210 SVSEARVMWDMKTGRSRGYGFVAFRDRTEADKALNSMDGEWLGSRAIRCNWANQKGQPSI 269
Query: 226 EDKQSSDAKSVVELT----NGSSEDGKETTNTEAPENNPQY-TTVYVGNLAPEVTQLDLH 280
+Q+ A + T + G ++ + A + PQ+ TT YVGNL P TQ DL
Sbjct: 270 SQQQALVAMGMTPTTAFGHHHFPTHGIQSYDMVA-QQTPQWQTTCYVGNLTPYTTQNDLV 328
Query: 281 RHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSK 340
F + G + E R+Q D+GF FV+ +H AA AI N + G+ +KCSWG
Sbjct: 329 PLFQNF--GYVLETRLQADRGFAFVKMDSHENAASAICQLNGYN---VNGRPLKCSWGKD 383
Query: 341 PTPPGTSSNPLP 352
P G N P
Sbjct: 384 RPPTGQFDNFSP 395
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 87/208 (41%), Gaps = 47/208 (22%)
Query: 52 DPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKS----SYGFIHYFDRRSA 107
D S ++VG++ +V + +L + FS+ G V +++ K+ YGF+ + DR A
Sbjct: 180 DTSNHFHIFVGDLSNEVNDEVLTQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRDRTEA 239
Query: 108 AMAILSLNGRHLFGQPIKVNWAYASGQREDTS---------------GHFNI-------- 144
A+ S++G L + I+ NWA GQ + GH +
Sbjct: 240 DKALNSMDGEWLGSRAIRCNWANQKGQPSISQQQALVAMGMTPTTAFGHHHFPTHGIQSY 299
Query: 145 --------------FVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSF 190
+VG+L+P T L F + + R+ D RGF FV
Sbjct: 300 DMVAQQTPQWQTTCYVGNLTPYTTQNDLVPLFQNFGYVLETRLQAD------RGFAFVKM 353
Query: 191 RNQQDAQSAINDLTGKWLGSRQIRCNWA 218
+ ++A SAI L G + R ++C+W
Sbjct: 354 DSHENAASAICQLNGYNVNGRPLKCSWG 381
>gi|310798412|gb|EFQ33305.1| RNA recognition domain-containing protein [Glomerella graminicola
M1.001]
Length = 482
Score = 224 bits (572), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 127/298 (42%), Positives = 177/298 (59%), Gaps = 17/298 (5%)
Query: 57 RSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS----YGFIHYFDRRSAAMAIL 112
R++YVG + +VTE +L+++F +TG V+ K+I DK++ YGF+ Y D +A A+
Sbjct: 87 RALYVGGLDQRVTEDVLRQIFETTGHVQNVKII-PDKNAKGYNYGFVEYDDPGAAERAMQ 145
Query: 113 SLNGRHLFGQPIKVNWAYASG--QREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSD 170
+LNGR + I+VNWAY S +EDTS HF+IFVGDLS EV D L FS + S S+
Sbjct: 146 TLNGRRVHQSEIRVNWAYQSNTSSKEDTSNHFHIFVGDLSNEVNDEILTQAFSAFGSVSE 205
Query: 171 ARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT-KGAGNNEDKQ 229
ARVMWD KTGRSRG+GFV+FR++ DA+ A++ + G+WLGSR IRCNWA KG + +Q
Sbjct: 206 ARVMWDMKTGRSRGYGFVAFRDRPDAEKALSSMDGEWLGSRAIRCNWANQKGQPSIAQQQ 265
Query: 230 SSDAKSVVELT----NGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHS 285
+ A + T + G + + TT YVGNL P T D+ F +
Sbjct: 266 AMQAMGLTPTTPFGHHQFPAHGVASYEVVLAQTPSWQTTCYVGNLTPYTTPNDVVPLFQN 325
Query: 286 LGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSKPTP 343
G + E R Q D+GF F++ +H AA+AI N + G+ +KCSWG TP
Sbjct: 326 F--GYVVESRFQADRGFAFIKMDSHESAAMAICQMNGYN---VNGRPLKCSWGKDKTP 378
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 83/208 (39%), Gaps = 47/208 (22%)
Query: 52 DPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKS----SYGFIHYFDRRSA 107
D S ++VG++ +V + +L + FS+ G V +++ K+ YGF+ + DR A
Sbjct: 172 DTSNHFHIFVGDLSNEVNDEILTQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRDRPDA 231
Query: 108 AMAILSLNGRHLFGQPIKVNWAYASGQ--------------------------------- 134
A+ S++G L + I+ NWA GQ
Sbjct: 232 EKALSSMDGEWLGSRAIRCNWANQKGQPSIAQQQAMQAMGLTPTTPFGHHQFPAHGVASY 291
Query: 135 ----REDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSF 190
+ S +VG+L+P T + F + ++R D RGF F+
Sbjct: 292 EVVLAQTPSWQTTCYVGNLTPYTTPNDVVPLFQNFGYVVESRFQAD------RGFAFIKM 345
Query: 191 RNQQDAQSAINDLTGKWLGSRQIRCNWA 218
+ + A AI + G + R ++C+W
Sbjct: 346 DSHESAAMAICQMNGYNVNGRPLKCSWG 373
>gi|169768824|ref|XP_001818882.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Aspergillus oryzae RIB40]
gi|238498168|ref|XP_002380319.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Aspergillus flavus NRRL3357]
gi|83766740|dbj|BAE56880.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|220693593|gb|EED49938.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Aspergillus flavus NRRL3357]
gi|391874569|gb|EIT83434.1| RRM domain protein [Aspergillus oryzae 3.042]
Length = 477
Score = 224 bits (571), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 129/307 (42%), Positives = 179/307 (58%), Gaps = 20/307 (6%)
Query: 57 RSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKS-------SYGFIHYFDRRSAAM 109
R++YVG + +VTE +L+++F +TG V K+I DK+ +YGF+ + D +A
Sbjct: 90 RALYVGGLDQRVTEDILKQIFETTGHVVSVKII-PDKNKFNSKGYNYGFVEFDDPGAAER 148
Query: 110 AILSLNGRHLFGQPIKVNWAYASG--QREDTSGHFNIFVGDLSPEVTDATLFACFSVYPS 167
A+ +LNGR + I+VNWAY S +EDTS HF+IFVGDLS EV D L FS + S
Sbjct: 149 AMQTLNGRRIHQSEIRVNWAYQSNSTNKEDTSNHFHIFVGDLSNEVNDEILQQAFSAFGS 208
Query: 168 CSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNED 227
S+ARVMWD KTGRSRG+GFV+FR++ DA A+ + G+WLGSR IRCNWA + +
Sbjct: 209 VSEARVMWDMKTGRSRGYGFVAFRDRADADKALGSMDGEWLGSRAIRCNWANQKGQPSIS 268
Query: 228 KQSSDAKSVVELTNGSSEDGKETTNTEA----PENNPQY-TTVYVGNLAPEVTQLDLHRH 282
+Q + A + T T ++ + PQ+ TT YVGNL P TQ DL
Sbjct: 269 QQQAMAAMGMTPTTAFGHHHFPTHGIQSYDMVVQQTPQWQTTCYVGNLTPYTTQNDLVPL 328
Query: 283 FHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSKPT 342
F + G + E R+Q D+GF F++ +H AA+AI N + G+ +KCSWG
Sbjct: 329 FQNF--GYVLETRLQADRGFAFIKMDSHENAAMAICQLNGYN---VNGRPLKCSWGKDRP 383
Query: 343 PPGTSSN 349
P G N
Sbjct: 384 PTGQFDN 390
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 87/208 (41%), Gaps = 47/208 (22%)
Query: 52 DPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKS----SYGFIHYFDRRSA 107
D S ++VG++ +V + +LQ+ FS+ G V +++ K+ YGF+ + DR A
Sbjct: 178 DTSNHFHIFVGDLSNEVNDEILQQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRDRADA 237
Query: 108 AMAILSLNGRHLFGQPIKVNWAYASGQREDTS---------------GHFNI-------- 144
A+ S++G L + I+ NWA GQ + GH +
Sbjct: 238 DKALGSMDGEWLGSRAIRCNWANQKGQPSISQQQAMAAMGMTPTTAFGHHHFPTHGIQSY 297
Query: 145 --------------FVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSF 190
+VG+L+P T L F + + R+ D RGF F+
Sbjct: 298 DMVVQQTPQWQTTCYVGNLTPYTTQNDLVPLFQNFGYVLETRLQAD------RGFAFIKM 351
Query: 191 RNQQDAQSAINDLTGKWLGSRQIRCNWA 218
+ ++A AI L G + R ++C+W
Sbjct: 352 DSHENAAMAICQLNGYNVNGRPLKCSWG 379
>gi|67517823|ref|XP_658695.1| hypothetical protein AN1091.2 [Aspergillus nidulans FGSC A4]
gi|40747053|gb|EAA66209.1| hypothetical protein AN1091.2 [Aspergillus nidulans FGSC A4]
Length = 892
Score = 224 bits (571), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 138/347 (39%), Positives = 188/347 (54%), Gaps = 29/347 (8%)
Query: 57 RSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDK-------SSYGFIHYFDRRSAAM 109
R++YVG + +VTE +L+++F +TG V K+I DK ++YGF+ + D +A
Sbjct: 90 RALYVGGLDPRVTEDILKQIFETTGHVISVKII-PDKNQFNSKGANYGFVEFDDPGAAER 148
Query: 110 AILSLNGRHLFGQPIKVNWAYAS--GQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPS 167
A+ +LNGR + I+VNWAY S +EDTS HF+IFVGDLS EV D L FS + S
Sbjct: 149 AMQTLNGRRIHQSEIRVNWAYQSNTANKEDTSNHFHIFVGDLSNEVNDEVLLQAFSAFGS 208
Query: 168 CSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT-KGAGNNE 226
S+ARVMWD KTGRSRG+GFV+FR + DA+ A+ + G+WLGSR IRCNWA KG +
Sbjct: 209 VSEARVMWDMKTGRSRGYGFVAFRERADAEKALTSMDGEWLGSRAIRCNWANQKGQPSIS 268
Query: 227 DKQSSDAKSVVELT----NGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRH 282
+Q+ A + T + G ++ + + TT YVGNL P TQ D+
Sbjct: 269 QQQAMAAMGMTPTTPFGHHHFPTHGIQSYDMVVQQTPAWQTTCYVGNLTPYTTQNDIVPL 328
Query: 283 FHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSKPT 342
F + G + E R+Q D+GF F++ TH AA AI N + G+ +KCSWG
Sbjct: 329 FQNF--GYVIETRMQADRGFAFIKMDTHENAASAICQLNGYN---VNGRPLKCSWGKDRP 383
Query: 343 PPGTSSNPLPPPAAAPIPGLSAADLLAYERQIAMSKMGGVHALMHPQ 389
P G N PG A A + GG M PQ
Sbjct: 384 PTGQFDN---------FPGQQANSPFASSPGPYFPQYGGPGGPMTPQ 421
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 86/207 (41%), Gaps = 47/207 (22%)
Query: 52 DPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKS----SYGFIHYFDRRSA 107
D S ++VG++ +V + +L + FS+ G V +++ K+ YGF+ + +R A
Sbjct: 178 DTSNHFHIFVGDLSNEVNDEVLLQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRERADA 237
Query: 108 AMAILSLNGRHLFGQPIKVNWAYASGQREDTS---------------GHFNI-------- 144
A+ S++G L + I+ NWA GQ + GH +
Sbjct: 238 EKALTSMDGEWLGSRAIRCNWANQKGQPSISQQQAMAAMGMTPTTPFGHHHFPTHGIQSY 297
Query: 145 --------------FVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSF 190
+VG+L+P T + F + + R+ D RGF F+
Sbjct: 298 DMVVQQTPAWQTTCYVGNLTPYTTQNDIVPLFQNFGYVIETRMQAD------RGFAFIKM 351
Query: 191 RNQQDAQSAINDLTGKWLGSRQIRCNW 217
++A SAI L G + R ++C+W
Sbjct: 352 DTHENAASAICQLNGYNVNGRPLKCSW 378
>gi|429863469|gb|ELA37920.1| nuclear and cytoplasmic polyadenylated rna-binding protein pub1
[Colletotrichum gloeosporioides Nara gc5]
Length = 479
Score = 224 bits (571), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 127/298 (42%), Positives = 177/298 (59%), Gaps = 17/298 (5%)
Query: 57 RSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS----YGFIHYFDRRSAAMAIL 112
R++YVG + +VTE +L+++F +TG V+ K+I DK++ YGF+ Y D +A A+
Sbjct: 86 RALYVGGLDQRVTEDVLRQIFETTGHVQNVKII-PDKNAKGYNYGFVEYDDPGAAERAMQ 144
Query: 113 SLNGRHLFGQPIKVNWAYASG--QREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSD 170
+LNGR + I+VNWAY S +EDTS HF+IFVGDLS EV D L FS + S S+
Sbjct: 145 TLNGRRVHQSEIRVNWAYQSNTSSKEDTSNHFHIFVGDLSNEVNDEVLTQAFSAFGSVSE 204
Query: 171 ARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT-KGAGNNEDKQ 229
ARVMWD KTGRSRG+GFV+FR++ DA+ A++ + G+WLGSR IRCNWA KG + +Q
Sbjct: 205 ARVMWDMKTGRSRGYGFVAFRDRPDAEKALSSMDGEWLGSRAIRCNWANQKGQPSIAQQQ 264
Query: 230 SSDAKSVVELT----NGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHS 285
+ A + T + G + + TT YVGNL P T D+ F +
Sbjct: 265 AMQAMGLTPTTPFGHHQFPAHGVASYEVVLAQTPSWQTTCYVGNLTPYTTPNDVVPLFQN 324
Query: 286 LGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSKPTP 343
G + E R Q D+GF F++ +H AA+AI N + G+ +KCSWG TP
Sbjct: 325 F--GYVVESRFQADRGFAFIKMDSHESAAMAICQMNGYN---VNGRPLKCSWGKDKTP 377
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 83/208 (39%), Gaps = 47/208 (22%)
Query: 52 DPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKS----SYGFIHYFDRRSA 107
D S ++VG++ +V + +L + FS+ G V +++ K+ YGF+ + DR A
Sbjct: 171 DTSNHFHIFVGDLSNEVNDEVLTQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRDRPDA 230
Query: 108 AMAILSLNGRHLFGQPIKVNWAYASGQ--------------------------------- 134
A+ S++G L + I+ NWA GQ
Sbjct: 231 EKALSSMDGEWLGSRAIRCNWANQKGQPSIAQQQAMQAMGLTPTTPFGHHQFPAHGVASY 290
Query: 135 ----REDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSF 190
+ S +VG+L+P T + F + ++R D RGF F+
Sbjct: 291 EVVLAQTPSWQTTCYVGNLTPYTTPNDVVPLFQNFGYVVESRFQAD------RGFAFIKM 344
Query: 191 RNQQDAQSAINDLTGKWLGSRQIRCNWA 218
+ + A AI + G + R ++C+W
Sbjct: 345 DSHESAAMAICQMNGYNVNGRPLKCSWG 372
>gi|380478106|emb|CCF43782.1| RNA recognition domain-containing protein [Colletotrichum
higginsianum]
Length = 482
Score = 224 bits (570), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 127/298 (42%), Positives = 177/298 (59%), Gaps = 17/298 (5%)
Query: 57 RSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS----YGFIHYFDRRSAAMAIL 112
R++YVG + +VTE +L+++F +TG V+ K+I DK++ YGF+ Y D +A A+
Sbjct: 87 RALYVGGLDQRVTEDVLRQIFETTGHVQNVKII-PDKNAKGYNYGFVEYDDPGAAERAMQ 145
Query: 113 SLNGRHLFGQPIKVNWAYASG--QREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSD 170
+LNGR + I+VNWAY S +EDTS HF+IFVGDLS EV D L FS + S S+
Sbjct: 146 TLNGRRVHQSEIRVNWAYQSNTSSKEDTSNHFHIFVGDLSNEVNDEILTQAFSAFGSVSE 205
Query: 171 ARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT-KGAGNNEDKQ 229
ARVMWD KTGRSRG+GFV+FR++ DA+ A++ + G+WLGSR IRCNWA KG + +Q
Sbjct: 206 ARVMWDMKTGRSRGYGFVAFRDRPDAEKALSSMDGEWLGSRAIRCNWANQKGQPSIAQQQ 265
Query: 230 SSDAKSVVELT----NGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHS 285
+ A + T + G + + TT YVGNL P T D+ F +
Sbjct: 266 AMQAMGLTPTTPFGHHQFPAHGVASYEVVLAQTPSWQTTCYVGNLTPYTTPNDVVPLFQN 325
Query: 286 LGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSKPTP 343
G + E R Q D+GF F++ +H AA+AI N + G+ +KCSWG TP
Sbjct: 326 F--GYVVESRFQADRGFAFIKMDSHESAAMAICQMNGYN---VNGRPLKCSWGKDKTP 378
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 83/208 (39%), Gaps = 47/208 (22%)
Query: 52 DPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKS----SYGFIHYFDRRSA 107
D S ++VG++ +V + +L + FS+ G V +++ K+ YGF+ + DR A
Sbjct: 172 DTSNHFHIFVGDLSNEVNDEILTQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRDRPDA 231
Query: 108 AMAILSLNGRHLFGQPIKVNWAYASGQ--------------------------------- 134
A+ S++G L + I+ NWA GQ
Sbjct: 232 EKALSSMDGEWLGSRAIRCNWANQKGQPSIAQQQAMQAMGLTPTTPFGHHQFPAHGVASY 291
Query: 135 ----REDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSF 190
+ S +VG+L+P T + F + ++R D RGF F+
Sbjct: 292 EVVLAQTPSWQTTCYVGNLTPYTTPNDVVPLFQNFGYVVESRFQAD------RGFAFIKM 345
Query: 191 RNQQDAQSAINDLTGKWLGSRQIRCNWA 218
+ + A AI + G + R ++C+W
Sbjct: 346 DSHESAAMAICQMNGYNVNGRPLKCSWG 373
>gi|413921567|gb|AFW61499.1| hypothetical protein ZEAMMB73_921536 [Zea mays]
Length = 185
Score = 224 bits (570), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 101/132 (76%), Positives = 117/132 (88%)
Query: 38 QIEPIPSGNLPPGFDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSSYG 97
Q+EPI +GNLPPGFDPSTCRSVYVGN++ VTE LL EVF S G VE CKLIRK+KSS+G
Sbjct: 54 QMEPISNGNLPPGFDPSTCRSVYVGNVNPNVTESLLIEVFQSAGLVERCKLIRKEKSSFG 113
Query: 98 FIHYFDRRSAAMAILSLNGRHLFGQPIKVNWAYASGQREDTSGHFNIFVGDLSPEVTDAT 157
F+ Y+DRRSAA+AI++L+GRH++GQ IKVNWAYAS QREDTSGHF+IFVGDLS EV DAT
Sbjct: 114 FVDYYDRRSAALAIMTLHGRHIYGQAIKVNWAYASTQREDTSGHFHIFVGDLSSEVNDAT 173
Query: 158 LFACFSVYPSCS 169
L+ACFS YPSCS
Sbjct: 174 LYACFSAYPSCS 185
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 44/81 (54%), Gaps = 7/81 (8%)
Query: 264 TVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDK--GFGFVRYSTHAEAALAIQMGN 321
+VYVGN+ P VT+ L F S AG++E ++ R + FGFV Y AALAI
Sbjct: 74 SVYVGNVNPNVTESLLIEVFQS--AGLVERCKLIRKEKSSFGFVDYYDRRSAALAIM--- 128
Query: 322 TTQSSYLFGKQMKCSWGSKPT 342
T +++G+ +K +W T
Sbjct: 129 TLHGRHIYGQAIKVNWAYAST 149
Score = 42.0 bits (97), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 44/82 (53%), Gaps = 4/82 (4%)
Query: 137 DTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDA 196
D S +++VG+++P VT++ L F +++ +K+ FGFV + +++ A
Sbjct: 68 DPSTCRSVYVGNVNPNVTESLLIEVFQSAGLVERCKLIRKEKSS----FGFVDYYDRRSA 123
Query: 197 QSAINDLTGKWLGSRQIRCNWA 218
AI L G+ + + I+ NWA
Sbjct: 124 ALAIMTLHGRHIYGQAIKVNWA 145
>gi|358397912|gb|EHK47280.1| hypothetical protein TRIATDRAFT_165657, partial [Trichoderma
atroviride IMI 206040]
Length = 465
Score = 223 bits (569), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 130/311 (41%), Positives = 178/311 (57%), Gaps = 29/311 (9%)
Query: 57 RSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS----YGFIHYFDRRSAAMAIL 112
R++YVG + +VTE +L+++F +TG V+ K+I DK++ YGF+ Y D +A A+
Sbjct: 76 RALYVGGLDQRVTEDVLRQIFETTGHVQNVKII-PDKNAKGYNYGFVEYDDPGAADRAMA 134
Query: 113 SLNGRHLFGQPIKVNWAYASGQ--REDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSD 170
+LNGR + I+VNWAY S +EDTS HF+IFVGDLS EV D L FS + S S+
Sbjct: 135 TLNGRRVHQSEIRVNWAYQSNTTTKEDTSNHFHIFVGDLSNEVNDDILHQAFSAFGSVSE 194
Query: 171 ARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQS 230
ARVMWD KTGRSRG+GFV+FR++ DA+ A++ + G+WLGSR IRCNWA N+ Q
Sbjct: 195 ARVMWDMKTGRSRGYGFVAFRDRPDAEKALSSMDGEWLGSRAIRCNWA------NQKGQP 248
Query: 231 SDAKSVVELTNGSS-----------EDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDL 279
S A+ G + G + + TT YVGNL P T D+
Sbjct: 249 SMAQQQAMQAMGMTPTTPFGHHQFPAHGIASYEMILAQTPNWQTTCYVGNLTPYTTHTDV 308
Query: 280 HRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGS 339
F + G + E R Q D+GF F++ TH AA+AI N + G+ +KCSWG
Sbjct: 309 VPLFQNF--GFVVESRFQADRGFAFIKMDTHENAAMAICQMNGYN---VNGRPLKCSWGK 363
Query: 340 KPTPPGTSSNP 350
TP S +P
Sbjct: 364 DKTPNSQSFDP 374
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/252 (23%), Positives = 97/252 (38%), Gaps = 50/252 (19%)
Query: 52 DPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKS----SYGFIHYFDRRSA 107
D S ++VG++ +V + +L + FS+ G V +++ K+ YGF+ + DR A
Sbjct: 161 DTSNHFHIFVGDLSNEVNDDILHQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRDRPDA 220
Query: 108 AMAILSLNGRHLFGQPIKVNWAYASGQREDTS---------------GHFNI-------- 144
A+ S++G L + I+ NWA GQ GH
Sbjct: 221 EKALSSMDGEWLGSRAIRCNWANQKGQPSMAQQQAMQAMGMTPTTPFGHHQFPAHGIASY 280
Query: 145 --------------FVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSF 190
+VG+L+P T + F + ++R D RGF F+
Sbjct: 281 EMILAQTPNWQTTCYVGNLTPYTTHTDVVPLFQNFGFVVESRFQAD------RGFAFIKM 334
Query: 191 RNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKET 250
++A AI + G + R ++C+W G + QS D + S G
Sbjct: 335 DTHENAAMAICQMNGYNVNGRPLKCSW---GKDKTPNSQSFDPQQQPYSPQTSQAPGFPG 391
Query: 251 TNTEAPENNPQY 262
T T P+ QY
Sbjct: 392 TPTYYPQYGAQY 403
>gi|302409198|ref|XP_003002433.1| nucleolysin TIA-1 [Verticillium albo-atrum VaMs.102]
gi|261358466|gb|EEY20894.1| nucleolysin TIA-1 [Verticillium albo-atrum VaMs.102]
Length = 443
Score = 223 bits (569), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 143/370 (38%), Positives = 199/370 (53%), Gaps = 27/370 (7%)
Query: 57 RSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKS----SYGFIHYFDRRSAAMAIL 112
R++Y+G + +VTE +L+++F +TG V+ K+I DK+ +YGF+ Y D +AA A+
Sbjct: 52 RALYIGGLDQRVTEDVLRQIFETTGHVQNVKII-PDKNQKGYNYGFVEYDDPGAAARAMQ 110
Query: 113 SLNGRHLFGQPIKVNWAYASG--QREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSD 170
+LNGR + I+VNWAY S +EDTS HF+IFVGDLS EV D L F+ + S S+
Sbjct: 111 TLNGRRV--HEIRVNWAYQSNTTSKEDTSNHFHIFVGDLSNEVNDEILSQAFAAFGSVSE 168
Query: 171 ARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT-KGAGNNEDKQ 229
ARVMWD KTGRSRG+GFV+FR++ DA+ A++ + G+WLGSR IRCNWA KG + +Q
Sbjct: 169 ARVMWDMKTGRSRGYGFVAFRDRPDAEKALSSMDGEWLGSRAIRCNWANQKGQPSIAQQQ 228
Query: 230 SSDAKSVVELT----NGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHS 285
+ A + T + G + + TTVYVGNL P T D+ F +
Sbjct: 229 AMQAMGMTPTTPFGHHQFPAHGMASYEVILAQTPNWQTTVYVGNLTPYTTPNDVVPLFQN 288
Query: 286 LGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSKPTPPG 345
G + E R Q D+GF F++ +H AA+AI N + G+ +KCSWG TP
Sbjct: 289 F--GFVVESRFQADRGFAFIKMESHEAAAMAICQMNGYN---VNGRPLKCSWGKDKTP-- 341
Query: 346 TSSNPLPP------PAAAPIPGLSAADLLAYERQIAMSKMGGVHALMHPQAQHPLKQAAM 399
++ P P +A PG AY Q G P AQ P A
Sbjct: 342 NAAGGFDPAQQGYSPQSATAPGAYPGTPTAYFPQYGAQYSGQPGNYGGPTAQSPAGYGAQ 401
Query: 400 GVGSAGASQA 409
+ G A
Sbjct: 402 PMAYGGPQSA 411
>gi|46122079|ref|XP_385593.1| hypothetical protein FG05417.1 [Gibberella zeae PH-1]
Length = 473
Score = 223 bits (568), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 145/376 (38%), Positives = 198/376 (52%), Gaps = 39/376 (10%)
Query: 57 RSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS----YGFIHYFDRRSAAMAIL 112
R++Y+G + +VTE +L+++F +TG V+ K+I DK++ YGF+ Y D +A A+
Sbjct: 82 RALYIGGLDQRVTEEVLRQIFETTGHVQNVKII-PDKNARGYNYGFVEYDDPGAAERAMQ 140
Query: 113 SLNGRHLFGQPIKVNWAYASG--QREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSD 170
+LNGR + I+VNWAY S +EDTS HF+IFVGDLS EV D L FS + S S+
Sbjct: 141 TLNGRRVHQSEIRVNWAYQSNTTNKEDTSNHFHIFVGDLSNEVNDEVLTQAFSAFGSVSE 200
Query: 171 ARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQS 230
ARVMWD KTGRSRG+GFV+FR++ +A+ A++ + G+WLGSR IRCNWA N+ Q
Sbjct: 201 ARVMWDMKTGRSRGYGFVAFRDRPEAEKALSSMDGEWLGSRAIRCNWA------NQKGQP 254
Query: 231 SDAKSVVELTNGSSED--------------GKETTNTEAPENNPQYTTVYVGNLAPEVTQ 276
S A+ G + E T+ P TTVYVGNL P T
Sbjct: 255 SMAQQQAMQAMGMTPTTPYGHHQFPAHGVASYEVILTQTPS---WQTTVYVGNLTPYTTP 311
Query: 277 LDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCS 336
D+ F + G + E R Q D+GF F++ +H AA+AI N + G+ +KCS
Sbjct: 312 NDVVPLFQNF--GFVVESRFQADRGFAFIKMDSHENAAMAICQMNGYN---VNGRPLKCS 366
Query: 337 WGSKPTPPGTSS-NPLPP--PAAAPIPGLSAADLLAYERQIAMSKMGGVHALMHPQAQHP 393
WG TP +P+ P P +A PG Y Q G PQA P
Sbjct: 367 WGKDKTPNAQGGFDPVQPFSPQSAQAPGFPGTP-TGYYPQYGAQYGGQPGNYGGPQAGSP 425
Query: 394 LKQAAMGVGSAGASQA 409
A +G A A
Sbjct: 426 AGYAGSPMGYAAPQSA 441
>gi|414869521|tpg|DAA48078.1| TPA: hypothetical protein ZEAMMB73_400135 [Zea mays]
Length = 183
Score = 223 bits (568), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 100/132 (75%), Positives = 117/132 (88%)
Query: 38 QIEPIPSGNLPPGFDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSSYG 97
Q+EP+ +GNLPPGFDPSTCRSVYVGN++ VTE LL EVF S G VE CKLIRK+KSS+G
Sbjct: 52 QMEPVSNGNLPPGFDPSTCRSVYVGNVNPNVTESLLIEVFQSAGLVERCKLIRKEKSSFG 111
Query: 98 FIHYFDRRSAAMAILSLNGRHLFGQPIKVNWAYASGQREDTSGHFNIFVGDLSPEVTDAT 157
F+ Y+DRRSAA+AI++L+GRH++GQ IKVNWAYAS QREDTSGHF+IFVGDLS EV DAT
Sbjct: 112 FVDYYDRRSAALAIMTLHGRHVYGQAIKVNWAYASTQREDTSGHFHIFVGDLSSEVNDAT 171
Query: 158 LFACFSVYPSCS 169
L+ACFS YPSCS
Sbjct: 172 LYACFSAYPSCS 183
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 44/81 (54%), Gaps = 7/81 (8%)
Query: 264 TVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDK--GFGFVRYSTHAEAALAIQMGN 321
+VYVGN+ P VT+ L F S AG++E ++ R + FGFV Y AALAI
Sbjct: 72 SVYVGNVNPNVTESLLIEVFQS--AGLVERCKLIRKEKSSFGFVDYYDRRSAALAIM--- 126
Query: 322 TTQSSYLFGKQMKCSWGSKPT 342
T +++G+ +K +W T
Sbjct: 127 TLHGRHVYGQAIKVNWAYAST 147
Score = 42.4 bits (98), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 42/76 (55%), Gaps = 4/76 (5%)
Query: 143 NIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAIND 202
+++VG+++P VT++ L F +++ +K+ FGFV + +++ A AI
Sbjct: 72 SVYVGNVNPNVTESLLIEVFQSAGLVERCKLIRKEKSS----FGFVDYYDRRSAALAIMT 127
Query: 203 LTGKWLGSRQIRCNWA 218
L G+ + + I+ NWA
Sbjct: 128 LHGRHVYGQAIKVNWA 143
>gi|358383610|gb|EHK21274.1| hypothetical protein TRIVIDRAFT_116557, partial [Trichoderma virens
Gv29-8]
Length = 466
Score = 223 bits (567), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 130/311 (41%), Positives = 178/311 (57%), Gaps = 29/311 (9%)
Query: 57 RSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS----YGFIHYFDRRSAAMAIL 112
R++YVG + +VTE +L+++F +TG V+ K+I DK++ YGF+ Y D +A A+
Sbjct: 77 RALYVGGLDQRVTEDVLRQIFETTGHVQNVKII-PDKNAKGYNYGFVEYDDPGAAERAMQ 135
Query: 113 SLNGRHLFGQPIKVNWAYASG--QREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSD 170
+LNGR + I+VNWAY S +EDTS HF+IFVGDLS EV D L FS + S S+
Sbjct: 136 TLNGRRVHQSEIRVNWAYQSNTTSKEDTSNHFHIFVGDLSNEVNDDILLQAFSAFGSVSE 195
Query: 171 ARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQS 230
ARVMWD KTGRSRG+GFV+FR++ DA+ A++ + G+WLGSR IRCNWA N+ Q
Sbjct: 196 ARVMWDMKTGRSRGYGFVAFRDRPDAEKALSSMDGEWLGSRAIRCNWA------NQKGQP 249
Query: 231 SDAKSVVELTNGSS-----------EDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDL 279
S A+ G + G + + TT YVGNL P T D+
Sbjct: 250 SMAQQQAMQAMGMTPTTPFGHHQFPAHGIASYEMILAQTPNWQTTCYVGNLTPYTTPNDV 309
Query: 280 HRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGS 339
F + G + E R Q D+GF F++ TH AA+AI N + G+ +KCSWG
Sbjct: 310 VPLFQNF--GFVVESRFQADRGFAFIKMDTHENAAMAICQMNGYN---VNGRPLKCSWGK 364
Query: 340 KPTPPGTSSNP 350
TP S +P
Sbjct: 365 DKTPNSGSFDP 375
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 83/208 (39%), Gaps = 47/208 (22%)
Query: 52 DPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKS----SYGFIHYFDRRSA 107
D S ++VG++ +V + +L + FS+ G V +++ K+ YGF+ + DR A
Sbjct: 162 DTSNHFHIFVGDLSNEVNDDILLQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRDRPDA 221
Query: 108 AMAILSLNGRHLFGQPIKVNWAYASGQREDTS---------------GHFNI-------- 144
A+ S++G L + I+ NWA GQ GH
Sbjct: 222 EKALSSMDGEWLGSRAIRCNWANQKGQPSMAQQQAMQAMGMTPTTPFGHHQFPAHGIASY 281
Query: 145 --------------FVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSF 190
+VG+L+P T + F + ++R D RGF F+
Sbjct: 282 EMILAQTPNWQTTCYVGNLTPYTTPNDVVPLFQNFGFVVESRFQAD------RGFAFIKM 335
Query: 191 RNQQDAQSAINDLTGKWLGSRQIRCNWA 218
++A AI + G + R ++C+W
Sbjct: 336 DTHENAAMAICQMNGYNVNGRPLKCSWG 363
>gi|340905400|gb|EGS17768.1| putative polyadenylated RNA protein [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 485
Score = 223 bits (567), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 128/299 (42%), Positives = 179/299 (59%), Gaps = 19/299 (6%)
Query: 57 RSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKS----SYGFIHYFDRRSAAMAIL 112
R++YVG + +VTE +L+++F +TG V+ K+I DK+ +YGF+ Y D +A A+
Sbjct: 93 RALYVGGLDPRVTEDVLRQIFETTGHVQSVKII-PDKNHRGYNYGFVEYDDPGAAERAMQ 151
Query: 113 SLNGRHLFGQPIKVNWAYAS--GQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSD 170
+LNGR + I+VNWAY S +EDTS HF+IFVGDLS EV D L+ FS + S S+
Sbjct: 152 TLNGRRVHQNEIRVNWAYQSNNANKEDTSNHFHIFVGDLSNEVNDEVLWQAFSAFGSISE 211
Query: 171 ARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT-KGAGNNEDKQ 229
ARVMWD KTGRSRG+GFV+FR + DA+ A++ + G+WLGSR IRCNWA KG + +Q
Sbjct: 212 ARVMWDMKTGRSRGYGFVAFRERADAEKALSSMDGEWLGSRAIRCNWANQKGQPSIHQQQ 271
Query: 230 SSDAKSVVELT----NGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHS 285
+ + T + G + + + TT YVGNL P TQ DL F +
Sbjct: 272 AMQQMGMTPTTPYGHHHFPTHGIHSYDMVVNQTPAWQTTCYVGNLTPYTTQNDLVPLFQN 331
Query: 286 LGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLF-GKQMKCSWGSKPTP 343
G + E R+Q D+GF F++ +H AA+AI N Y+ G+ +KCSWG P
Sbjct: 332 F--GYVVECRMQADRGFAFIKMDSHENAAMAICQLN----GYMVNGRPLKCSWGKDRNP 384
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 85/208 (40%), Gaps = 47/208 (22%)
Query: 52 DPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKS----SYGFIHYFDRRSA 107
D S ++VG++ +V + +L + FS+ G + +++ K+ YGF+ + +R A
Sbjct: 178 DTSNHFHIFVGDLSNEVNDEVLWQAFSAFGSISEARVMWDMKTGRSRGYGFVAFRERADA 237
Query: 108 AMAILSLNGRHLFGQPIKVNWAYASGQRE---------------DTSGHFNI-------- 144
A+ S++G L + I+ NWA GQ GH +
Sbjct: 238 EKALSSMDGEWLGSRAIRCNWANQKGQPSIHQQQAMQQMGMTPTTPYGHHHFPTHGIHSY 297
Query: 145 --------------FVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSF 190
+VG+L+P T L F + + R+ D RGF F+
Sbjct: 298 DMVVNQTPAWQTTCYVGNLTPYTTQNDLVPLFQNFGYVVECRMQAD------RGFAFIKM 351
Query: 191 RNQQDAQSAINDLTGKWLGSRQIRCNWA 218
+ ++A AI L G + R ++C+W
Sbjct: 352 DSHENAAMAICQLNGYMVNGRPLKCSWG 379
>gi|378726298|gb|EHY52757.1| nucleolin [Exophiala dermatitidis NIH/UT8656]
Length = 481
Score = 222 bits (566), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 130/305 (42%), Positives = 176/305 (57%), Gaps = 23/305 (7%)
Query: 57 RSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--------YGFIHYFDRRSAA 108
R++YVG + +VTE +L+++F +TG V K+I DK++ YGF+ Y D +A
Sbjct: 81 RALYVGGLDPRVTEDVLKQIFETTGHVVSVKII-PDKNAQFSSKGFNYGFVEYDDPGAAE 139
Query: 109 MAILSLNGRHLFGQPIKVNWAYASG--QREDTSGHFNIFVGDLSPEVTDATLFACFSVYP 166
A+ +LNGR + I+VNWAY S +EDTS HF+IFVGDLS EV D L FS +
Sbjct: 140 RAMTTLNGRRVHQAEIRVNWAYQSNSTNKEDTSNHFHIFVGDLSNEVNDEVLLQAFSAFG 199
Query: 167 SCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNE 226
S S+ARVMWD KTGRSRG+GFV+FR + DA+ A+ + G+WLGSR IR NWA + +
Sbjct: 200 SVSEARVMWDMKTGRSRGYGFVAFRERADAEKALASMDGEWLGSRAIRVNWANQKGQPSI 259
Query: 227 DKQSSDAKSVVELTNGSSEDGKETTNTEAPE----NNPQY-TTVYVGNLAPEVTQLDLHR 281
+Q + A + T T ++ E P + TT YVGNL P TQ DL
Sbjct: 260 SQQQAMAAMGMSPTTPFGHHHFPTQGIQSYEMVVNQTPAWQTTCYVGNLTPYTTQADLVP 319
Query: 282 HFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSY-LFGKQMKCSWGSK 340
F + G + E R Q D+GF F++ TH AA+AI S Y + G+ +KCSWG
Sbjct: 320 LFQNF--GYVVETRFQSDRGFAFIKMDTHENAAMAI----CQLSGYNVNGRPLKCSWGKD 373
Query: 341 PTPPG 345
P G
Sbjct: 374 RPPTG 378
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 87/208 (41%), Gaps = 47/208 (22%)
Query: 52 DPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKS----SYGFIHYFDRRSA 107
D S ++VG++ +V + +L + FS+ G V +++ K+ YGF+ + +R A
Sbjct: 170 DTSNHFHIFVGDLSNEVNDEVLLQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRERADA 229
Query: 108 AMAILSLNGRHLFGQPIKVNWAYASGQREDTS---------------GHFNI-------- 144
A+ S++G L + I+VNWA GQ + GH +
Sbjct: 230 EKALASMDGEWLGSRAIRVNWANQKGQPSISQQQAMAAMGMSPTTPFGHHHFPTQGIQSY 289
Query: 145 --------------FVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSF 190
+VG+L+P T A L F + + R D RGF F+
Sbjct: 290 EMVVNQTPAWQTTCYVGNLTPYTTQADLVPLFQNFGYVVETRFQSD------RGFAFIKM 343
Query: 191 RNQQDAQSAINDLTGKWLGSRQIRCNWA 218
++A AI L+G + R ++C+W
Sbjct: 344 DTHENAAMAICQLSGYNVNGRPLKCSWG 371
>gi|402079107|gb|EJT74372.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Gaeumannomyces graminis var. tritici R3-111a-1]
Length = 482
Score = 222 bits (565), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 127/294 (43%), Positives = 175/294 (59%), Gaps = 18/294 (6%)
Query: 57 RSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS----YGFIHYFDRRSAAMAIL 112
R++YVG + +VTE +L+++F +TG V+ K+I DK++ YGF+ Y D +A A+
Sbjct: 87 RALYVGGLDARVTEDVLRQIFETTGHVQNVKII-PDKNAKGFNYGFVEYDDPGAADRAMQ 145
Query: 113 SLNGRHLFGQPIKVNWAYASGQ---REDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCS 169
+LNGR + I+VNWAY S +EDTS HF+IFVGDLS EV D L FSV+ S S
Sbjct: 146 TLNGRRVHQSEIRVNWAYQSANTTTKEDTSNHFHIFVGDLSNEVNDEVLTQAFSVFGSVS 205
Query: 170 DARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT-KGAGNNEDK 228
+ARVMWD KTGRSRG+GFV+FR++ DA+ A++ + G+WLGSR IRCNWA KG + +
Sbjct: 206 EARVMWDMKTGRSRGYGFVAFRDRPDAEKALSSMDGEWLGSRAIRCNWANQKGQPSIAQQ 265
Query: 229 QSSDAKSVVELT----NGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFH 284
Q+ A + T + G ++ + TT YVGNL P T DL F
Sbjct: 266 QAMQAMGMTPTTPYGHHHFPTHGMQSYEMVLNQTPAYQTTCYVGNLTPYTTANDLVPLFQ 325
Query: 285 SLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWG 338
+ G + E R Q D+GF F++ TH A AI N + G+ +KCSWG
Sbjct: 326 NF--GYVVESRFQSDRGFAFIKMDTHENATSAICNLNGYN---VNGRPLKCSWG 374
>gi|400595086|gb|EJP62896.1| RNA recognition domain-containing protein [Beauveria bassiana ARSEF
2860]
Length = 468
Score = 222 bits (565), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 128/304 (42%), Positives = 178/304 (58%), Gaps = 29/304 (9%)
Query: 57 RSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS----YGFIHYFDRRSAAMAIL 112
R++YVG + +VTE +L+++F +TG V+ K+I DK++ YGF+ Y D +A A+
Sbjct: 68 RALYVGGLDQRVTEDVLRQIFETTGHVQNVKII-PDKNAKGFNYGFVEYDDPGAADRAMQ 126
Query: 113 SLNGRHLFGQPIKVNWAY--ASGQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSD 170
+LNGR + I+VNWAY S +EDTSGHF+IFVGDLS EV D L FS + S S+
Sbjct: 127 TLNGRRVHQSEIRVNWAYQANSSGKEDTSGHFHIFVGDLSNEVNDDILTQAFSAFGSVSE 186
Query: 171 ARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQS 230
ARVMWD KTGRSRG+GFV+FR++ +A+ A++ + G+WLGSR IRCNWA N+ Q
Sbjct: 187 ARVMWDMKTGRSRGYGFVAFRDRPEAEKALSSMDGEWLGSRAIRCNWA------NQKGQP 240
Query: 231 SDAKSVVELTNGSSED-----------GKETTNTEAPENNPQYTTVYVGNLAPEVTQLDL 279
S A+ G + G + + + TTVYVGNL P T D+
Sbjct: 241 SMAQQQAMQAMGLTPTTPFGHHQFPTHGVGSYDVILAQTPNWQTTVYVGNLTPYTTPNDV 300
Query: 280 HRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGS 339
F + G + E R Q D+GF F++ TH A++AI N + G+ +KCSWG
Sbjct: 301 VPLFQNF--GFVVESRFQADRGFAFIKMDTHENASMAICQMNGYN---VNGRPLKCSWGK 355
Query: 340 KPTP 343
TP
Sbjct: 356 DKTP 359
>gi|340522219|gb|EGR52452.1| predicted protein [Trichoderma reesei QM6a]
Length = 477
Score = 221 bits (564), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 132/325 (40%), Positives = 182/325 (56%), Gaps = 31/325 (9%)
Query: 57 RSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS----YGFIHYFDRRSAAMAIL 112
R++YVG + +VTE +L+++F +TG V+ K+I DK++ YGF+ Y D +A A+
Sbjct: 75 RALYVGGLDQRVTEDVLRQIFETTGHVQNVKII-PDKNAKGYNYGFVEYDDPGAAERAMQ 133
Query: 113 SLNGRHLFGQPIKVNWAYASG--QREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSD 170
+LNGR + I+VNWAY S +EDTS HF+IFVGDLS EV D L FS + S S+
Sbjct: 134 TLNGRRVHQSEIRVNWAYQSNTTSKEDTSNHFHIFVGDLSNEVNDDILMQAFSAFGSVSE 193
Query: 171 ARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQS 230
ARVMWD KTGRSRG+GFV+FR++ DA+ A++ + G+WLGSR IRCNWA N+ Q
Sbjct: 194 ARVMWDMKTGRSRGYGFVAFRDRPDAEKALSSMDGEWLGSRAIRCNWA------NQKGQP 247
Query: 231 SDAKSVVELTNGSS-----------EDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDL 279
S A+ G + G + + TT YVGNL P T D+
Sbjct: 248 SMAQQQAMQAMGMTPTTPFGHHQFPAHGVASYEMILAQTPNWQTTCYVGNLTPYTTPNDV 307
Query: 280 HRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGS 339
F + G + E R Q D+GF F++ +H AA+AI N + G+ +KCSWG
Sbjct: 308 VPLFQNF--GFVMESRFQADRGFAFIKMDSHENAAMAICQMNGYN---VNGRPLKCSWGK 362
Query: 340 KPTPPGTSSNPLPP--PAAAPIPGL 362
P S +P P P + PG
Sbjct: 363 DKAPNSGSFDPQQPYSPQTSQAPGF 387
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 86/214 (40%), Gaps = 47/214 (21%)
Query: 52 DPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKS----SYGFIHYFDRRSA 107
D S ++VG++ +V + +L + FS+ G V +++ K+ YGF+ + DR A
Sbjct: 160 DTSNHFHIFVGDLSNEVNDDILMQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRDRPDA 219
Query: 108 AMAILSLNGRHLFGQPIKVNWAYASGQREDTS---------------GHFNI-------- 144
A+ S++G L + I+ NWA GQ GH
Sbjct: 220 EKALSSMDGEWLGSRAIRCNWANQKGQPSMAQQQAMQAMGMTPTTPFGHHQFPAHGVASY 279
Query: 145 --------------FVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSF 190
+VG+L+P T + F + ++R D RGF F+
Sbjct: 280 EMILAQTPNWQTTCYVGNLTPYTTPNDVVPLFQNFGFVMESRFQAD------RGFAFIKM 333
Query: 191 RNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGN 224
+ ++A AI + G + R ++C+W A N
Sbjct: 334 DSHENAAMAICQMNGYNVNGRPLKCSWGKDKAPN 367
>gi|389639074|ref|XP_003717170.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Magnaporthe oryzae 70-15]
gi|351642989|gb|EHA50851.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Magnaporthe oryzae 70-15]
gi|440475727|gb|ELQ44390.1| nucleolysin TIA-1 [Magnaporthe oryzae Y34]
gi|440486439|gb|ELQ66302.1| nucleolysin TIA-1 [Magnaporthe oryzae P131]
Length = 479
Score = 221 bits (564), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 126/294 (42%), Positives = 176/294 (59%), Gaps = 18/294 (6%)
Query: 57 RSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS----YGFIHYFDRRSAAMAIL 112
R++YVG + +VTE +L+++F +TG V+ K+I DK++ YGF+ Y D +A A+
Sbjct: 85 RALYVGGLDARVTEDVLRQIFETTGHVQNVKII-PDKNAKGYNYGFVEYDDPGAADRAMQ 143
Query: 113 SLNGRHLFGQPIKVNWAY---ASGQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCS 169
+LNGR + I+VNWAY S +EDTS HF+IFVGDLS EV D L FSV+ S S
Sbjct: 144 TLNGRRVHQSEIRVNWAYQAATSATKEDTSNHFHIFVGDLSNEVNDEVLTQAFSVFGSVS 203
Query: 170 DARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT-KGAGNNEDK 228
+ARVMWD KTGRSRG+GFV+FR++ DA+ A++ + G+WLGSR IRCNWA KG + +
Sbjct: 204 EARVMWDMKTGRSRGYGFVAFRDRSDAEKALSSMDGEWLGSRAIRCNWANQKGQPSIAQQ 263
Query: 229 QSSDAKSVVELT----NGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFH 284
Q+ A + T + G ++ + TT YVGNL P T D+ F
Sbjct: 264 QAMSAVGMTPTTPFGHHHFPTHGMQSYEMVVNQTPAYQTTCYVGNLTPYTTANDVVPLFQ 323
Query: 285 SLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWG 338
+ G + E R Q D+GF F++ +H AA AI N + G+ +KCSWG
Sbjct: 324 NF--GYVVESRFQADRGFAFIKMDSHENAAQAICGLNGYN---VNGRPLKCSWG 372
>gi|346319566|gb|EGX89167.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Cordyceps militaris CM01]
Length = 450
Score = 220 bits (560), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 127/303 (41%), Positives = 177/303 (58%), Gaps = 29/303 (9%)
Query: 57 RSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS----YGFIHYFDRRSAAMAIL 112
R++YVG + +VTE +L+++F +TG V+ K+I DK++ YGF+ Y D +A A+
Sbjct: 70 RALYVGGLDQRVTEDVLRQIFETTGHVQNVKII-PDKNAKGFNYGFVEYDDPGAAERAMQ 128
Query: 113 SLNGRHLFGQPIKVNWAYASGQ--REDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSD 170
+LNGR + I+VNWAY S +EDTSGHF+IFVGDLS EV D L FS + S S+
Sbjct: 129 TLNGRRVHQSEIRVNWAYQSNTSGKEDTSGHFHIFVGDLSNEVNDEILTQAFSAFGSVSE 188
Query: 171 ARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQS 230
ARVMWD KTGRSRG+GFV+FR++ +A+ A++ + G+WLGSR IRCNWA N+ Q
Sbjct: 189 ARVMWDMKTGRSRGYGFVAFRDRPEAEKALSSMDGEWLGSRAIRCNWA------NQKGQP 242
Query: 231 SDAKSVVELTNGSS-----------EDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDL 279
S A+ G + G + + + TTVYVGNL P T D+
Sbjct: 243 SMAQQQAMQAMGLTPTTPFGHHQFPTHGVGSYDVILAQTPTWQTTVYVGNLTPYTTPNDV 302
Query: 280 HRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGS 339
F + G + E R Q D+GF F++ TH A++AI N + G+ +KCSWG
Sbjct: 303 VPLFQNF--GFVVESRFQADRGFAFIKMDTHENASMAICQMNGYN---VNGRPLKCSWGK 357
Query: 340 KPT 342
T
Sbjct: 358 DKT 360
>gi|322709421|gb|EFZ00997.1| oligouridylate binding protein ,putative [Metarhizium anisopliae
ARSEF 23]
Length = 472
Score = 218 bits (555), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 125/298 (41%), Positives = 177/298 (59%), Gaps = 21/298 (7%)
Query: 57 RSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS----YGFIHYFDRRSAAMAIL 112
R++YVG + +VTE +L+++F +TG V+ K+I DK++ YGF+ Y D +A A+
Sbjct: 84 RALYVGGLEQRVTEDVLRQIFETTGHVQNVKII-PDKNAKGFNYGFVEYDDPGAAERAMS 142
Query: 113 SLNGRHLFGQPIKVNWAYASG--QREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSD 170
+LNGR + I+VNWAY S +EDTS HF+IFVGDLS EV D L FS + + S+
Sbjct: 143 TLNGR----REIRVNWAYQSNTSNKEDTSSHFHIFVGDLSNEVNDDILLQAFSAFGTVSE 198
Query: 171 ARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT-KGAGNNEDKQ 229
ARVMWD KTGR+RG+GFV+FR++ DA+ A++ + G+WLGSR IRCNWA KG + +Q
Sbjct: 199 ARVMWDMKTGRTRGYGFVAFRDRSDAEKALSSMDGEWLGSRAIRCNWANQKGQPSIAQQQ 258
Query: 230 SSDAKSVVELTNGSSED----GKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHS 285
+ A + T G + + + TT YVGNL P T D+ F +
Sbjct: 259 AMQAMGLTPTTPFGHHQFPAHGVGSYDVVLNQTPNWQTTCYVGNLTPYTTPNDVVPLFQN 318
Query: 286 LGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSKPTP 343
G + E R Q D+GF F++ +H AA+AI N + G+ +KCSWG TP
Sbjct: 319 F--GFVVESRFQADRGFAFIKMDSHENAAMAICQMNGYN---VNGRPLKCSWGKDKTP 371
>gi|302496843|ref|XP_003010422.1| hypothetical protein ARB_03123 [Arthroderma benhamiae CBS 112371]
gi|291173965|gb|EFE29782.1| hypothetical protein ARB_03123 [Arthroderma benhamiae CBS 112371]
Length = 541
Score = 217 bits (553), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 133/336 (39%), Positives = 178/336 (52%), Gaps = 53/336 (15%)
Query: 57 RSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--------------------- 95
R++YVG + +VTE +L+++F +TG V+ K+I S
Sbjct: 102 RALYVGGLDPRVTEDILKQIFETTGHVQSVKIIPDKNVSQRLLLLYLSDLYLFFVLYVYL 161
Query: 96 ------------------YGFIHYFDRRSAAMAILSLNGRHLFGQPIKVNWAYAS--GQR 135
YGFI Y D +A A+ +LNGR + I+VNWAY S +
Sbjct: 162 NLITSALLLVIFQSKGLNYGFIEYDDPGAAERAMQTLNGRRVHQSEIRVNWAYQSNTASK 221
Query: 136 EDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQD 195
EDTS HF+IFVGDLS EV D L FS S S+ARVMWD KTGRSRG+GFV+FR + D
Sbjct: 222 EDTSSHFHIFVGDLSNEVNDEVLLQAFSACGSVSEARVMWDMKTGRSRGYGFVAFRERAD 281
Query: 196 AQSAINDLTGKWLGSRQIRCNWAT-KGAGNNEDKQSSDAKSVVELT----NGSSEDGKET 250
A+ A++ + G+WLGSR IRCNWA KG + +Q+ A + T + G ++
Sbjct: 282 AEKALSSMDGEWLGSRAIRCNWANQKGQPSISQQQAMAAMGMTPTTPFGHHHFPTHGVQS 341
Query: 251 TNTEAPENNPQY-TTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYST 309
+ + PQ+ TT YVGNL P TQ DL F + G + E R Q D+GF FV+ T
Sbjct: 342 YDMVV-QQTPQWQTTCYVGNLTPYTTQNDLIPLFQNF--GYVVETRFQADRGFAFVKMDT 398
Query: 310 HAEAALAIQMGNTTQSSYLFGKQMKCSWGSKPTPPG 345
H AA+AI N + G+ +KCSWG P G
Sbjct: 399 HENAAMAICQLNGYN---VNGRPLKCSWGKDRPPTG 431
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 85/207 (41%), Gaps = 47/207 (22%)
Query: 52 DPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKS----SYGFIHYFDRRSA 107
D S+ ++VG++ +V + +L + FS+ G V +++ K+ YGF+ + +R A
Sbjct: 223 DTSSHFHIFVGDLSNEVNDEVLLQAFSACGSVSEARVMWDMKTGRSRGYGFVAFRERADA 282
Query: 108 AMAILSLNGRHLFGQPIKVNWAYASGQREDTS---------------GHFNI-------- 144
A+ S++G L + I+ NWA GQ + GH +
Sbjct: 283 EKALSSMDGEWLGSRAIRCNWANQKGQPSISQQQAMAAMGMTPTTPFGHHHFPTHGVQSY 342
Query: 145 --------------FVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSF 190
+VG+L+P T L F + + R D RGF FV
Sbjct: 343 DMVVQQTPQWQTTCYVGNLTPYTTQNDLIPLFQNFGYVVETRFQAD------RGFAFVKM 396
Query: 191 RNQQDAQSAINDLTGKWLGSRQIRCNW 217
++A AI L G + R ++C+W
Sbjct: 397 DTHENAAMAICQLNGYNVNGRPLKCSW 423
>gi|171687054|ref|XP_001908468.1| hypothetical protein [Podospora anserina S mat+]
gi|170943488|emb|CAP69141.1| unnamed protein product [Podospora anserina S mat+]
Length = 481
Score = 217 bits (552), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 126/297 (42%), Positives = 173/297 (58%), Gaps = 29/297 (9%)
Query: 57 RSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS----YGFIHYFDRRSAAMAIL 112
R++YVG + +VTE +L+++F +TG V+ K+I DK++ YGF+ Y D SA A+
Sbjct: 88 RALYVGGLDPRVTEDVLRQIFETTGHVQNVKII-PDKNAKGYNYGFVEYDDPGSAERAMQ 146
Query: 113 SLNGRHLFGQPIKVNWAYASGQ--REDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSD 170
+LNGR + I+VNWAY S +EDTS HF+IFVGDLS EV D L FS + S S+
Sbjct: 147 TLNGRRVHQAEIRVNWAYQSNNTNKEDTSNHFHIFVGDLSNEVNDEVLLQAFSAFGSVSE 206
Query: 171 ARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQS 230
ARVMWD KTGRSRG+GFV+FR++ +A+ A++ + G+WLGSR IRCNWA N+ Q
Sbjct: 207 ARVMWDMKTGRSRGYGFVAFRDRPEAEKALSSMDGEWLGSRAIRCNWA------NQKGQP 260
Query: 231 SDAKSVVELTNGSS-----------EDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDL 279
S A+ G + G + + + TT YVGNL P TQ DL
Sbjct: 261 SIAQQQAMQQMGMTPTTPYGHHHFPTHGVHSYDMIVNQTPAWQTTCYVGNLTPYTTQNDL 320
Query: 280 HRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCS 336
F + G + E R Q D+GF F++ TH AA+AI N + G+ +KCS
Sbjct: 321 VPLFQNF--GFVVESRFQADRGFAFIKMDTHENAAMAICQLNGYN---VNGRPLKCS 372
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 82/205 (40%), Gaps = 47/205 (22%)
Query: 52 DPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKS----SYGFIHYFDRRSA 107
D S ++VG++ +V + +L + FS+ G V +++ K+ YGF+ + DR A
Sbjct: 173 DTSNHFHIFVGDLSNEVNDEVLLQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRDRPEA 232
Query: 108 AMAILSLNGRHLFGQPIKVNWAYASGQRE---------------DTSGHFNI-------- 144
A+ S++G L + I+ NWA GQ GH +
Sbjct: 233 EKALSSMDGEWLGSRAIRCNWANQKGQPSIAQQQAMQQMGMTPTTPYGHHHFPTHGVHSY 292
Query: 145 --------------FVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSF 190
+VG+L+P T L F + ++R D RGF F+
Sbjct: 293 DMIVNQTPAWQTTCYVGNLTPYTTQNDLVPLFQNFGFVVESRFQAD------RGFAFIKM 346
Query: 191 RNQQDAQSAINDLTGKWLGSRQIRC 215
++A AI L G + R ++C
Sbjct: 347 DTHENAAMAICQLNGYNVNGRPLKC 371
>gi|302654241|ref|XP_003018929.1| hypothetical protein TRV_07061 [Trichophyton verrucosum HKI 0517]
gi|291182617|gb|EFE38284.1| hypothetical protein TRV_07061 [Trichophyton verrucosum HKI 0517]
Length = 543
Score = 216 bits (550), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 133/338 (39%), Positives = 178/338 (52%), Gaps = 55/338 (16%)
Query: 57 RSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--------------------- 95
R++YVG + +VTE +L+++F +TG V+ K+I S
Sbjct: 102 RALYVGGLDPRVTEDILKQIFETTGHVQSVKIIPDKNVSQHLLLLYLSDLYLFFTYVLYV 161
Query: 96 --------------------YGFIHYFDRRSAAMAILSLNGRHLFGQPIKVNWAYAS--G 133
YGFI Y D +A A+ +LNGR + I+VNWAY S
Sbjct: 162 YLYLITSALLLVIFQSKGLNYGFIEYDDPGAAERAMQTLNGRRVHQSEIRVNWAYQSNTA 221
Query: 134 QREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQ 193
+EDTS HF+IFVGDLS EV D L FS S S+ARVMWD KTGRSRG+GFV+FR +
Sbjct: 222 SKEDTSSHFHIFVGDLSNEVNDEVLLQAFSACGSVSEARVMWDMKTGRSRGYGFVAFRER 281
Query: 194 QDAQSAINDLTGKWLGSRQIRCNWAT-KGAGNNEDKQSSDAKSVVELT----NGSSEDGK 248
DA+ A++ + G+WLGSR IRCNWA KG + +Q+ A + T + G
Sbjct: 282 ADAEKALSSMDGEWLGSRAIRCNWANQKGQPSISQQQAMAAMGMTPTTPFGHHHFPTHGV 341
Query: 249 ETTNTEAPENNPQY-TTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRY 307
++ + + PQ+ TT YVGNL P TQ DL F + G + E R Q D+GF FV+
Sbjct: 342 QSYDMVV-QQTPQWQTTCYVGNLTPYTTQNDLIPLFQNF--GYVVETRFQADRGFAFVKM 398
Query: 308 STHAEAALAIQMGNTTQSSYLFGKQMKCSWGSKPTPPG 345
TH AA+AI N + G+ +KCSWG P G
Sbjct: 399 DTHENAAMAICQLNGYNVN---GRPLKCSWGKDRPPTG 433
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 85/207 (41%), Gaps = 47/207 (22%)
Query: 52 DPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKS----SYGFIHYFDRRSA 107
D S+ ++VG++ +V + +L + FS+ G V +++ K+ YGF+ + +R A
Sbjct: 225 DTSSHFHIFVGDLSNEVNDEVLLQAFSACGSVSEARVMWDMKTGRSRGYGFVAFRERADA 284
Query: 108 AMAILSLNGRHLFGQPIKVNWAYASGQREDTS---------------GHFNI-------- 144
A+ S++G L + I+ NWA GQ + GH +
Sbjct: 285 EKALSSMDGEWLGSRAIRCNWANQKGQPSISQQQAMAAMGMTPTTPFGHHHFPTHGVQSY 344
Query: 145 --------------FVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSF 190
+VG+L+P T L F + + R D RGF FV
Sbjct: 345 DMVVQQTPQWQTTCYVGNLTPYTTQNDLIPLFQNFGYVVETRFQAD------RGFAFVKM 398
Query: 191 RNQQDAQSAINDLTGKWLGSRQIRCNW 217
++A AI L G + R ++C+W
Sbjct: 399 DTHENAAMAICQLNGYNVNGRPLKCSW 425
>gi|432875366|ref|XP_004072806.1| PREDICTED: nucleolysin TIA-1 isoform p40-like [Oryzias latipes]
Length = 386
Score = 216 bits (550), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 119/290 (41%), Positives = 177/290 (61%), Gaps = 22/290 (7%)
Query: 57 RSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRRSAAMAILSL 114
R++YVGN+ VTEPL+ +VF+ GP + CK+I + Y F+ ++D R AA ++ ++
Sbjct: 7 RTLYVGNLSRDVTEPLILQVFTQIGPCKSCKMIVDTAGNDPYCFVEFYDHRHAAASLAAM 66
Query: 115 NGRHLFGQPIKVNWAYA-SGQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARV 173
NGR + G+ +KVNWA + Q++DTS HF++FVGDLSPE+T + A F+ + SDARV
Sbjct: 67 NGRKIMGKEVKVNWATTPTSQKKDTSNHFHVFVGDLSPEITTEDVKAAFAPFGRISDARV 126
Query: 174 MWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSSDA 233
+ D TG+S+G+GFVSF N+ DA++AI + G+WLG RQIR NWAT+ + S++
Sbjct: 127 VKDMATGKSKGYGFVSFFNKWDAENAIQHMGGQWLGGRQIRTNWATRKPPAPKTTYESNS 186
Query: 234 KSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEE 293
K + +E + +P N TVY G ++ +T+ + + F + G I E
Sbjct: 187 KHL---------SFEEVMSQSSPSN----CTVYCGGVSSGLTEQLMRQTFSAFGQ--IME 231
Query: 294 VRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSKPTP 343
VRV DKG+ FVR+++H AA AI N T + G +KC WG K TP
Sbjct: 232 VRVFPDKGYSFVRFNSHESAAHAIVSVNGTS---IDGHVVKCYWG-KETP 277
>gi|408392881|gb|EKJ72170.1| hypothetical protein FPSE_07657 [Fusarium pseudograminearum CS3096]
Length = 484
Score = 216 bits (550), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 145/387 (37%), Positives = 199/387 (51%), Gaps = 50/387 (12%)
Query: 57 RSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS----YGFIHYFDRRSAAMAIL 112
R++Y+G + +VTE +L+++F +TG V+ K+I DK++ YGF+ Y D +A A+
Sbjct: 82 RALYIGGLDQRVTEEVLRQIFETTGHVQNVKII-PDKNARGYNYGFVEYDDPGAAERAMQ 140
Query: 113 SLNGRHLF-----------GQPIKVNWAYASG--QREDTSGHFNIFVGDLSPEVTDATLF 159
+LNGR + + I+VNWAY S +EDTS HF+IFVGDLS EV D L
Sbjct: 141 TLNGRRVHQSVPYPDTTRNSKEIRVNWAYQSNTTNKEDTSNHFHIFVGDLSNEVNDEVLT 200
Query: 160 ACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT 219
FS + S S+ARVMWD KTGRSRG+GFV+FR++ +A+ A++ + G+WLGSR IRCNWA
Sbjct: 201 QAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRDRPEAEKALSSMDGEWLGSRAIRCNWA- 259
Query: 220 KGAGNNEDKQSSDAKSVVELTNGSSED--------------GKETTNTEAPENNPQYTTV 265
N+ Q S A+ G + E T+ P TTV
Sbjct: 260 -----NQKGQPSMAQQQAMQAMGMTPTTPYGHHQFPAHGVASYEVILTQTPS---WQTTV 311
Query: 266 YVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQS 325
YVGNL P T D+ F + G + E R Q D+GF F++ +H AA+AI N
Sbjct: 312 YVGNLTPYTTPNDVVPLFQNF--GFVVESRFQADRGFAFIKMDSHENAAMAICQMNGYN- 368
Query: 326 SYLFGKQMKCSWGSKPTPPGTSS-NPLPP--PAAAPIPGLSAADLLAYERQIAMSKMGGV 382
+ G+ +KCSWG TP +P+ P P +A PG Y Q G
Sbjct: 369 --VNGRPLKCSWGKDKTPNAQGGFDPVQPFSPQSAQAPGFPGTP-TGYYPQYGAQYGGQP 425
Query: 383 HALMHPQAQHPLKQAAMGVGSAGASQA 409
PQA P A +G A A
Sbjct: 426 GNYGGPQAGSPAGYAGSPMGYAAPQSA 452
>gi|348522243|ref|XP_003448635.1| PREDICTED: nucleolysin TIA-1 isoform p40 [Oreochromis niloticus]
Length = 387
Score = 216 bits (550), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 119/290 (41%), Positives = 170/290 (58%), Gaps = 22/290 (7%)
Query: 57 RSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRRSAAMAILSL 114
R++YVGN+ VTEPL+ +VF+ GP + CK+I + Y F+ ++D R AA ++ ++
Sbjct: 8 RTLYVGNLSRDVTEPLILQVFTQIGPCKSCKMIVDTAGNDPYCFVEFYDHRHAAASLAAM 67
Query: 115 NGRHLFGQPIKVNWAYA-SGQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARV 173
NGR + G+ +KVNWA + Q++DTS HF++FVGDLSPE+T + A F + SDARV
Sbjct: 68 NGRKIMGKEVKVNWATTPTSQKKDTSNHFHVFVGDLSPEITTEDVKAAFGPFGRISDARV 127
Query: 174 MWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSSDA 233
+ D TG+S+G+GFVSF N+ DA++AI + G+WLG RQIR NWAT+ A
Sbjct: 128 VKDMATGKSKGYGFVSFFNKWDAENAIQHMGGQWLGGRQIRTNWATR---------KPPA 178
Query: 234 KSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEE 293
N E N +P N TVY G ++ +T+ + + F G I E
Sbjct: 179 PKTTHENNSKHLSFDEVVNQSSPSN----CTVYCGGVSTGLTEQLMRQTFSPFGQ--IME 232
Query: 294 VRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSKPTP 343
VRV DKG+ FVR+++H AA AI + S + G +KC WG K TP
Sbjct: 233 VRVFPDKGYSFVRFNSHESAAHAIV---SVNGSSIEGHIVKCYWG-KETP 278
>gi|154269845|ref|XP_001535826.1| hypothetical protein HCAG_09244 [Ajellomyces capsulatus NAm1]
gi|150409464|gb|EDN04912.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 387
Score = 214 bits (546), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 119/267 (44%), Positives = 164/267 (61%), Gaps = 14/267 (5%)
Query: 57 RSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS----YGFIHYFDRRSAAMAIL 112
R++Y+G + +VTE +L+++F +TG V+ K+I DK+S YGF+ Y D +A A+
Sbjct: 92 RALYIGGLDARVTEDILRQIFETTGHVQSVKII-PDKNSKGLNYGFVEYDDPGAAERAMS 150
Query: 113 SLNGRHLFGQPIKVNWAYASGQ--REDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSD 170
+LNGR + I+VNWAY S +EDTS HF+IFVGDLS EV D L FS + S S+
Sbjct: 151 TLNGRRVHQSEIRVNWAYQSNNNNKEDTSNHFHIFVGDLSNEVNDEVLLQAFSAFGSVSE 210
Query: 171 ARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT-KGAGNNEDKQ 229
ARVMWD KTGRSRG+GFV+FR + DA+ A++ + G+WLGSR IRCNWA KG + +Q
Sbjct: 211 ARVMWDMKTGRSRGYGFVAFRERPDAEKALSSMDGEWLGSRAIRCNWANQKGQPSISQQQ 270
Query: 230 SSDAKSVVELT----NGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHS 285
+ A + T + G ++ + A + TT YVGNL P TQ DL F +
Sbjct: 271 AMAAMGMTPSTPFGHHHFPTHGVQSYDMVAAQTPQWQTTCYVGNLTPYTTQNDLIPLFQN 330
Query: 286 LGAGVIEEVRVQRDKGFGFVRYSTHAE 312
G + E R Q D+GF FV+ TH +
Sbjct: 331 F--GYVVETRFQTDRGFRFVKMDTHEK 355
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 45/208 (21%), Positives = 91/208 (43%), Gaps = 38/208 (18%)
Query: 144 IFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDL 203
+++G L VT+ L F +++ D K + +GFV + + A+ A++ L
Sbjct: 94 LYIGGLDARVTEDILRQIFETTGHVQSVKIIPD-KNSKGLNYGFVEYDDPGAAERAMSTL 152
Query: 204 TGKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYT 263
G+ + +IR NWA + NN++ S+ +
Sbjct: 153 NGRRVHQSEIRVNWAYQSNNNNKEDTSN------------------------------HF 182
Query: 264 TVYVGNLAPEVTQLDLHRHFHSLG----AGVIEEVRVQRDKGFGFVRYSTHAEAALAIQM 319
++VG+L+ EV L + F + G A V+ +++ R +G+GFV + +A A+
Sbjct: 183 HIFVGDLSNEVNDEVLLQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRERPDAEKAL-- 240
Query: 320 GNTTQSSYLFGKQMKCSWGSKPTPPGTS 347
++ +L + ++C+W ++ P S
Sbjct: 241 -SSMDGEWLGSRAIRCNWANQKGQPSIS 267
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 47/87 (54%), Gaps = 4/87 (4%)
Query: 52 DPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKS----SYGFIHYFDRRSA 107
D S ++VG++ +V + +L + FS+ G V +++ K+ YGF+ + +R A
Sbjct: 177 DTSNHFHIFVGDLSNEVNDEVLLQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRERPDA 236
Query: 108 AMAILSLNGRHLFGQPIKVNWAYASGQ 134
A+ S++G L + I+ NWA GQ
Sbjct: 237 EKALSSMDGEWLGSRAIRCNWANQKGQ 263
>gi|260830993|ref|XP_002610444.1| hypothetical protein BRAFLDRAFT_124262 [Branchiostoma floridae]
gi|229295810|gb|EEN66454.1| hypothetical protein BRAFLDRAFT_124262 [Branchiostoma floridae]
Length = 1022
Score = 214 bits (544), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 127/338 (37%), Positives = 191/338 (56%), Gaps = 28/338 (8%)
Query: 10 QQQQQQALMQQALLQQQSLYHPGLLAAPQIEPIPSGNLPPGFDPSTCRSVYVGNIHTQVT 69
Q ++A M+ S + PG A + IPS D S R++YVGN+ QVT
Sbjct: 72 HHQAKEAPMRSHREGDISQHLPGSTTAEMVGLIPSME-----DESRPRTLYVGNLSRQVT 126
Query: 70 EPLLQEVFSSTGPVEGCKLIRKD--KSSYGFIHYFDRRSAAMAILSLNGRHLFGQPIKVN 127
E L+ ++F + GP + CK+I + Y F+ ++D A+ A+ ++NGR + + +KVN
Sbjct: 127 EQLILQLFGAIGPCKSCKMISEHAGNDPYCFVEFYDHNHASAALTAMNGRKIMHKEVKVN 186
Query: 128 WAYA-SGQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFG 186
WA SG ++DTS H ++FVGDLSPE+ L A F+ + SDARV+ D +T +SRG+G
Sbjct: 187 WATTPSGNKKDTSNHHHVFVGDLSPEIDTTDLKAAFAPFGKISDARVVRDAQTAKSRGYG 246
Query: 187 FVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSED 246
FVSF N+ DA++AI ++G+WLG R IR NWAT+ + + S E+ +S
Sbjct: 247 FVSFVNKVDAENAIGAMSGQWLGGRAIRTNWATRKPPPPKSNEGQKQLSYDEVLCQAS-- 304
Query: 247 GKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVR 306
P TTVY G + +T+ DL R+ S G I+E+RV +KG+ F+R
Sbjct: 305 -------------PTNTTVYCGGITKGLTE-DLMRNTFS-NFGPIQEIRVFPEKGYSFIR 349
Query: 307 YSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSKPTPP 344
+ +H AA+AI N TQ + G+ +KCSWG + + P
Sbjct: 350 FFSHEVAAMAIVTVNGTQ---IEGQAVKCSWGKESSDP 384
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 96/217 (44%), Gaps = 40/217 (18%)
Query: 136 EDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQD 195
ED S ++VG+LS +VT+ + F C + M + G + FV F +
Sbjct: 108 EDESRPRTLYVGNLSRQVTEQLILQLFGAIGPCKSCK-MISEHAGND-PYCFVEFYDHNH 165
Query: 196 AQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEA 255
A +A+ + G+ + ++++ NWAT +GN +D T+N
Sbjct: 166 ASAALTAMNGRKIMHKEVKVNWATTPSGNKKD----------------------TSN--- 200
Query: 256 PENNPQYTTVYVGNLAPEVTQLDLHRHFHSLG----AGVIEEVRVQRDKGFGFVRYSTHA 311
+ V+VG+L+PE+ DL F G A V+ + + + +G+GFV +
Sbjct: 201 ------HHHVFVGDLSPEIDTTDLKAAFAPFGKISDARVVRDAQTAKSRGYGFVSFVNKV 254
Query: 312 EAALAIQMGNTTQSSYLFGKQMKCSWGSKPTPPGTSS 348
+A AI +L G+ ++ +W ++ PP S+
Sbjct: 255 DAENAI---GAMSGQWLGGRAIRTNWATRKPPPPKSN 288
>gi|410922589|ref|XP_003974765.1| PREDICTED: nucleolysin TIA-1 isoform p40-like [Takifugu rubripes]
Length = 386
Score = 214 bits (544), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 122/314 (38%), Positives = 181/314 (57%), Gaps = 31/314 (9%)
Query: 57 RSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRRSAAMAILSL 114
R++YVGN+ VTEPL+ +VF+ GP + CK+I + Y F+ +++ R AA ++ ++
Sbjct: 7 RTLYVGNLSRDVTEPLILQVFTQIGPCKSCKMIVDTAGNDPYCFVEFYEHRHAAASLAAM 66
Query: 115 NGRHLFGQPIKVNWAYA-SGQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARV 173
NGR + G+ +KVNWA + Q++DTS HF++FVGDLSPE+T + A F + SDARV
Sbjct: 67 NGRKIMGKEVKVNWATTPTSQKKDTSNHFHVFVGDLSPEITTDDVKAAFGPFGRISDARV 126
Query: 174 MWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSSDA 233
+ D TG+S+G+GFVSF N+ DA++AI + G+WLG RQIR NWAT+ + S++
Sbjct: 127 VKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAPKTTYESNS 186
Query: 234 KSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEE 293
K + + N +P N TVY G ++ +T+ + + F G I E
Sbjct: 187 KQLCF---------DDVVNQSSPSN----CTVYCGGVSTGLTEQLMRQTFSPFGP--IME 231
Query: 294 VRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSKPTP---------P 344
+RV DKG+ FVR+++H AA AI + S + G +KC WG K TP P
Sbjct: 232 IRVFPDKGYSFVRFNSHESAAHAIV---SVNGSSIEGHVVKCYWG-KETPDMMNTMQQMP 287
Query: 345 GTSSNPLPPPAAAP 358
N + PAA P
Sbjct: 288 MPQQNKMSFPAAQP 301
>gi|427789733|gb|JAA60318.1| Putative rox8 [Rhipicephalus pulchellus]
Length = 406
Score = 213 bits (541), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 133/347 (38%), Positives = 191/347 (55%), Gaps = 25/347 (7%)
Query: 57 RSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRK-DKSSYGFIHYFDRRSAAMAILSLN 115
R++YVGN+ T VTE LL VF G V+GCK+I + Y F+ + D +SAA A+L++N
Sbjct: 13 RTLYVGNLDTAVTEELLVAVFGQMGQVKGCKIIHEPGNDPYCFVEFSDHQSAASALLAMN 72
Query: 116 GRHLFGQPIKVNWAYASGQ--REDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARV 173
R FG+ +KVNWA + G + DTS H +IFVGDLSPE+ L F+ + SD RV
Sbjct: 73 KRLCFGKEMKVNWATSPGNTPKLDTSKHHHIFVGDLSPEIETTQLRDAFAPFGDISDCRV 132
Query: 174 MWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSSDA 233
+ D +T +S+G+GFVSF + DA++AI + G+WLGSR IR NWAT+ N + D
Sbjct: 133 VRDPQTLKSKGYGFVSFVKKADAENAIGTMNGQWLGSRAIRTNWATRKPPANRTQAEVD- 191
Query: 234 KSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEE 293
+ T + D E N +P N TVY G + +++ + + F S GA I+E
Sbjct: 192 --ITTSTKPLTFD--EVYNQSSPTN----CTVYCGGITQGLSEELMQKTFSSYGA--IQE 241
Query: 294 VRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSKPTPPGTSSNPLPP 353
+RV +DKG+ F+R+ T A AI T +S + G+ +KCSWG + T P P
Sbjct: 242 IRVFKDKGYAFIRFGTKEAATHAIV---ATHNSDVNGQTVKCSWGKEATDPNNQQQPQVS 298
Query: 354 PA----AAPIPGLSAADLLAYERQIAMSKMGGVHALMHPQAQHPLKQ 396
P + P +A LA + +MG +PQA +P Q
Sbjct: 299 PGDKHPSWPEQRNPSAGNLATQYSYPYQQMG----YWYPQAGYPQVQ 341
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/208 (20%), Positives = 87/208 (41%), Gaps = 33/208 (15%)
Query: 49 PGFDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKS----SYGFIHYFDR 104
P D S ++VG++ ++ L++ F+ G + C+++R ++ YGF+ + +
Sbjct: 93 PKLDTSKHHHIFVGDLSPEIETTQLRDAFAPFGDISDCRVVRDPQTLKSKGYGFVSFVKK 152
Query: 105 RSAAMAILSLNGRHLFGQPIKVNWAYASGQREDTSGHFNI-------------------- 144
A AI ++NG+ L + I+ NWA T +I
Sbjct: 153 ADAENAIGTMNGQWLGSRAIRTNWATRKPPANRTQAEVDITTSTKPLTFDEVYNQSSPTN 212
Query: 145 ---FVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAIN 201
+ G ++ +++ + FS Y + + RV D +G+ F+ F ++ A AI
Sbjct: 213 CTVYCGGITQGLSEELMQKTFSSYGAIQEIRVFKD------KGYAFIRFGTKEAATHAIV 266
Query: 202 DLTGKWLGSRQIRCNWATKGAGNNEDKQ 229
+ + ++C+W + N +Q
Sbjct: 267 ATHNSDVNGQTVKCSWGKEATDPNNQQQ 294
Score = 42.4 bits (98), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 44/87 (50%), Gaps = 8/87 (9%)
Query: 258 NNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDKG---FGFVRYSTHAEAA 314
N+ Q T+YVGNL VT+ L F +G ++ ++ + G + FV +S H AA
Sbjct: 8 NDCQPRTLYVGNLDTAVTEELLVAVFGQMGQ--VKGCKIIHEPGNDPYCFVEFSDHQSAA 65
Query: 315 LAIQMGNTTQSSYLFGKQMKCSWGSKP 341
A+ N FGK+MK +W + P
Sbjct: 66 SALLAMN---KRLCFGKEMKVNWATSP 89
>gi|47086779|ref|NP_997793.1| cytotoxic granule-associated RNA binding protein 1 [Danio rerio]
gi|28279551|gb|AAH45368.1| Cytotoxic granule-associated RNA binding protein 1 [Danio rerio]
Length = 386
Score = 213 bits (541), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 119/289 (41%), Positives = 172/289 (59%), Gaps = 21/289 (7%)
Query: 57 RSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRRSAAMAILSL 114
+++YVGN+ VTE L+ ++F GP + CK+I + Y F+ +F+ R AA ++ ++
Sbjct: 8 KTLYVGNLSRDVTEALIMQLFGQIGPCKSCKMIVDTAGNDPYCFVEFFEHRHAAASLAAM 67
Query: 115 NGRHLFGQPIKVNWAYA-SGQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARV 173
NGR + G+ +KVNWA + S Q++DTS HF++FVGDLSPE+T + A F+ + SDARV
Sbjct: 68 NGRKIMGKEVKVNWATSPSSQKKDTSNHFHVFVGDLSPEITTDDIRAAFAPFGRISDARV 127
Query: 174 MWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSSDA 233
+ D TG+S+G+GFVSF N+ DA++AI + G+WLG RQIR NWAT ++
Sbjct: 128 VKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWAT--------RKPPAP 179
Query: 234 KSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEE 293
K+ E TN E N +P N TVY G + +T+ + + F G I E
Sbjct: 180 KATYE-TNTKHLSFDEVVNQSSPSN----CTVYCGGVTTGLTEQLMRQTFSPFGQ--IME 232
Query: 294 VRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSKPT 342
VRV DKG+ FVR+++H AA AI N T L G +KC WG + T
Sbjct: 233 VRVFPDKGYSFVRFNSHESAAHAIVSVNGTS---LEGHIVKCYWGKETT 278
>gi|47217530|emb|CAG02457.1| unnamed protein product [Tetraodon nigroviridis]
Length = 418
Score = 212 bits (539), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 119/319 (37%), Positives = 180/319 (56%), Gaps = 21/319 (6%)
Query: 60 YVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRRSAAMAILSLNGR 117
YVGN+ VTEPL+ +VF+ GP + CK+I + Y F+ +++ R AA ++ ++NGR
Sbjct: 15 YVGNLSRDVTEPLILQVFTQIGPCKSCKMIVDTAGNDPYCFVEFYEHRHAAASLAAMNGR 74
Query: 118 HLFGQPIKVNWAYA-SGQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWD 176
+ G+ +KVNWA + Q++DTS HF++FVGDLSPE+T + A F + SDARV+ D
Sbjct: 75 KIMGKEVKVNWATTPTSQKKDTSNHFHVFVGDLSPEITTDDVKAAFGPFGRISDARVVKD 134
Query: 177 QKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSSDAKSV 236
TG+S+G+GFVSF N+ DA++AI + G+WLG RQIR NWAT+ + S++K +
Sbjct: 135 MATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAPKTTYESNSKQL 194
Query: 237 VELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRV 296
+ N +P N TVY G ++ +T+ + + F G I E+RV
Sbjct: 195 CF---------DDVVNQSSPSN----CTVYCGGVSTGLTEQLMRQTFSPFGP--IMEIRV 239
Query: 297 QRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSKPTPPGTSSNPLPPPAA 356
DKG+ FVR+++H AA AI + S + G +KC WG + + +P P
Sbjct: 240 FPDKGYSFVRFNSHESAAHAIV---SVNGSSIEGHVVKCYWGKETPDMMNTMQQMPMPQV 296
Query: 357 APIPGLSAADLLAYERQIA 375
+ L A ER +A
Sbjct: 297 GMPQACLPSSLTATERILA 315
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 44/76 (57%), Gaps = 3/76 (3%)
Query: 53 PSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSSYGFIHYFDRRSAAMAIL 112
PS C +VY G + T +TE L+++ FS GP+ ++ DK Y F+ + SAA AI+
Sbjct: 205 PSNC-TVYCGGVSTGLTEQLMRQTFSPFGPIMEIRVF-PDK-GYSFVRFNSHESAAHAIV 261
Query: 113 SLNGRHLFGQPIKVNW 128
S+NG + G +K W
Sbjct: 262 SVNGSSIEGHVVKCYW 277
>gi|380748929|ref|NP_001244132.1| nucleolysin TIAR isoform 2 [Gallus gallus]
gi|28883273|gb|AAO49720.1| TIA-1 [Gallus gallus]
Length = 372
Score = 211 bits (538), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 119/290 (41%), Positives = 174/290 (60%), Gaps = 22/290 (7%)
Query: 57 RSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRRSAAMAILSL 114
+++YVGN+ VTE L+ ++FS GP + CK+I + Y F+ +++ R AA A+ ++
Sbjct: 7 KTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFYEHRHAASALAAM 66
Query: 115 NGRHLFGQPIKVNWAYA-SGQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARV 173
NGR + G+ +KVNWA S Q++DTS HF++FVGDLSPE+T + A F+ + SDARV
Sbjct: 67 NGRKIMGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKAAFAPFGRISDARV 126
Query: 174 MWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSSDA 233
+ D TG+S+G+GFVSF N+ DA++AI + G+WLG RQIR NWAT+ + S+
Sbjct: 127 VKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAPKSTYESNT 186
Query: 234 KSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEE 293
K + S +D N +P N TVY G + +T+ + + F G I E
Sbjct: 187 KQL------SYDD---VVNQSSPSN----CTVYCGGVTSGLTEQLMRQTFSPFGQ--IME 231
Query: 294 VRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSKPTP 343
+RV DKG+ FVR+++H AA AI N T + G +KC WG K TP
Sbjct: 232 IRVFPDKGYSFVRFNSHESAAHAIVSVNGTT---IEGHVVKCYWG-KETP 277
>gi|147902038|ref|NP_001087561.1| TIA1 cytotoxic granule-associated RNA binding protein [Xenopus
laevis]
gi|51261513|gb|AAH80105.1| MGC84540 protein [Xenopus laevis]
Length = 389
Score = 211 bits (537), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 122/301 (40%), Positives = 174/301 (57%), Gaps = 33/301 (10%)
Query: 57 RSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRRSAAMAILSL 114
R++YVGN+ VTEPL+ +VFS GP + CK+I + Y F+ +F+ R AA ++ ++
Sbjct: 7 RTLYVGNLSRDVTEPLILQVFSQLGPCKSCKMIMDTAGNDPYCFVEFFEHRHAAASLAAI 66
Query: 115 NGRHLFGQPIKVNWAYA-SGQREDTSG-----------HFNIFVGDLSPEVTDATLFACF 162
NGR + G+ +KVNWA S Q++D + HF++FVGDLSPE+T + A F
Sbjct: 67 NGRKIMGKEVKVNWATTPSSQKKDANSSSVVSTLRSQDHFHVFVGDLSPEITTDDIKAAF 126
Query: 163 SVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGA 222
+ + SDARV+ D TG+S+G+GFVSF N+ DA++AI + G+WLG RQIR NWAT+
Sbjct: 127 APFGRISDARVVKDMTTGKSKGYGFVSFFNKWDAENAIAQMGGQWLGGRQIRTNWATRKP 186
Query: 223 GNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRH 282
+ S+AK + +E N +P N TVY G + +T+ + +
Sbjct: 187 PAPKSTYESNAKQLTY---------EEVVNQSSPSN----CTVYCGGVTSGLTEQLMRQT 233
Query: 283 FHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSKPT 342
F G I EVRV DKG+ FVR+S+H AA AI N T + G +KC WG K T
Sbjct: 234 FSPFGQ--IMEVRVFPDKGYSFVRFSSHESAAHAIVSVNGTT---IEGHVVKCYWG-KET 287
Query: 343 P 343
P
Sbjct: 288 P 288
>gi|70995622|ref|XP_752566.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Aspergillus fumigatus Af293]
gi|66850201|gb|EAL90528.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Aspergillus fumigatus Af293]
gi|159131321|gb|EDP56434.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Aspergillus fumigatus A1163]
Length = 489
Score = 211 bits (536), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 128/313 (40%), Positives = 178/313 (56%), Gaps = 35/313 (11%)
Query: 57 RSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSSYGFIHYFDRRSAAMAILSLNG 116
R++YVG + +VTE +L+++F +TG V+ K+I DK+ D +A + +++L
Sbjct: 91 RALYVGGLDPRVTEDILKQIFETTGHVQSVKII-PDKN--------DTITALLNLMTLVR 141
Query: 117 RHLFGQP------------IKVNWAYAS--GQREDTSGHFNIFVGDLSPEVTDATLFACF 162
+P I+VNWAY S +EDTS HF+IFVGDLS EV D L F
Sbjct: 142 LRGLCKPSTAVESISRYAEIRVNWAYQSNSANKEDTSSHFHIFVGDLSNEVNDEILLQAF 201
Query: 163 SVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT-KG 221
S + S S+ARVMWD KTGRSRG+GFV+FR + DA+ A+N + G+WLGSR IRCNWA KG
Sbjct: 202 SAFGSVSEARVMWDMKTGRSRGYGFVAFRERADAEKALNAMDGEWLGSRAIRCNWANQKG 261
Query: 222 AGNNEDKQSSDAKSVVELT----NGSSEDGKETTNTEAPENNPQY-TTVYVGNLAPEVTQ 276
+ +Q+ A + T + G ++ + + PQ+ TT YVGNL P TQ
Sbjct: 262 QPSISQQQAMAAMGMTPTTPFGHHHFPTHGVQSYDMVV-QQTPQWQTTCYVGNLTPYTTQ 320
Query: 277 LDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCS 336
DL FH+ G + E R+Q D+GF F++ TH AA+AI N + G+ +KCS
Sbjct: 321 NDLVPLFHNF--GYVLETRLQADRGFAFIKMDTHENAAMAICQLNGYNVN---GRPLKCS 375
Query: 337 WGSKPTPPGTSSN 349
WG P G N
Sbjct: 376 WGKDRPPTGQFDN 388
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 86/207 (41%), Gaps = 47/207 (22%)
Query: 52 DPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKS----SYGFIHYFDRRSA 107
D S+ ++VG++ +V + +L + FS+ G V +++ K+ YGF+ + +R A
Sbjct: 176 DTSSHFHIFVGDLSNEVNDEILLQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRERADA 235
Query: 108 AMAILSLNGRHLFGQPIKVNWAYASGQREDTS---------------GHFNI-------- 144
A+ +++G L + I+ NWA GQ + GH +
Sbjct: 236 EKALNAMDGEWLGSRAIRCNWANQKGQPSISQQQAMAAMGMTPTTPFGHHHFPTHGVQSY 295
Query: 145 --------------FVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSF 190
+VG+L+P T L F + + R+ D RGF F+
Sbjct: 296 DMVVQQTPQWQTTCYVGNLTPYTTQNDLVPLFHNFGYVLETRLQAD------RGFAFIKM 349
Query: 191 RNQQDAQSAINDLTGKWLGSRQIRCNW 217
++A AI L G + R ++C+W
Sbjct: 350 DTHENAAMAICQLNGYNVNGRPLKCSW 376
>gi|344306484|ref|XP_003421917.1| PREDICTED: nucleolysin TIAR-like [Loxodonta africana]
Length = 504
Score = 211 bits (536), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 119/296 (40%), Positives = 177/296 (59%), Gaps = 21/296 (7%)
Query: 48 PPGFDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRR 105
P F+ R +YVGN+ VTE L+ ++FS GP + CK+I + S+ Y F+ +++ R
Sbjct: 129 PATFEVQKGRLLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSNDPYCFVEFYEHR 188
Query: 106 SAAMAILSLNGRHLFGQPIKVNWAYA-SGQREDTSGHFNIFVGDLSPEVTDATLFACFSV 164
AA A+ ++NGR + G+ +KVNWA S Q++DTS HF++FVGDLSPE+T + + F+
Sbjct: 189 DAAAALAAMNGRKILGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAP 248
Query: 165 YPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGN 224
+ SDARV+ D TG+S+G+GFVSF N+ DA++AI + G+WLG RQIR NWAT+
Sbjct: 249 FGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPA 308
Query: 225 NEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFH 284
+ Q ++ K + ++ N +P+N TVY G +A +T + + F
Sbjct: 309 PKSTQENNTKQL---------RFEDVVNQSSPKN----CTVYCGGIASGLTDQLMRQTFS 355
Query: 285 SLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSK 340
G I E+RV +KG+ FVR+STH AA AI N T + G +KC WG +
Sbjct: 356 PFGQ--IMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTT---IEGHVVKCYWGKE 406
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/204 (21%), Positives = 86/204 (42%), Gaps = 29/204 (14%)
Query: 52 DPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRK----DKSSYGFIHYFDRRSA 107
D S V+VG++ ++T ++ F+ G + ++++ YGF+ ++++ A
Sbjct: 221 DTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDA 280
Query: 108 AMAILSLNGRHLFGQPIKVNWAY------ASGQREDTS-------------GHFNIFVGD 148
AI+ + G+ L G+ I+ NWA S Q +T + ++ G
Sbjct: 281 ENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYCGG 340
Query: 149 LSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWL 208
++ +TD + FS + + RV +G+ FV F + A AI + G +
Sbjct: 341 IASGLTDQLMRQTFSPFGQIMEIRVF------PEKGYSFVRFSTHESAAHAIVSVNGTTI 394
Query: 209 GSRQIRCNWATKGAGNNEDKQSSD 232
++C W + ++ Q D
Sbjct: 395 EGHVVKCYWGKESPDMTKNFQQVD 418
>gi|384491350|gb|EIE82546.1| hypothetical protein RO3G_07251 [Rhizopus delemar RA 99-880]
Length = 348
Score = 210 bits (534), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 119/317 (37%), Positives = 177/317 (55%), Gaps = 37/317 (11%)
Query: 44 SGNLPPGFDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLI--RKDKS----SYG 97
+ N+ +P+T ++YVGN+ +VT+ +L E+F++ G V K+I RK + +YG
Sbjct: 7 TSNVAETTNPAT--TIYVGNLDQRVTDTMLNEIFTTVGQVVSVKIISVRKHNNFGAVNYG 64
Query: 98 FIHYFDRRSAAMAILSLNGRHLFGQPIKVNWAYASGQ--------REDTSGHFNIFVGDL 149
F+ + D R A AI +NGR +F I+ NWA S +EDT+ HF++FVGDL
Sbjct: 65 FVEFADPRVAEQAIQDMNGRKIFNYEIRANWAQPSANINPPLQMTKEDTTNHFHVFVGDL 124
Query: 150 SPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLG 209
+ E+ D L FS + + S+A VMWD +G+SRGFGFV+FR++ DA+ AI + G+WLG
Sbjct: 125 AAEINDEKLAQAFSEFGTMSEAHVMWDPLSGKSRGFGFVAFRDKTDAERAIATMNGEWLG 184
Query: 210 SRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQY-TTVYVG 268
+R IRCNWAT+ + + + G++ + P Y T++YVG
Sbjct: 185 TRPIRCNWATQKG---------------QTAMPAPQPGQQLPYEVVVQQTPAYVTSIYVG 229
Query: 269 NLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYL 328
N+ V+Q DL + F G ++EV+ Q D+GF FV+ TH AA AI Q+ +
Sbjct: 230 NIPLNVSQNDLVQPFQRF--GYVQEVKFQADRGFAFVKMDTHENAANAIVH---LQNMSI 284
Query: 329 FGKQMKCSWGSKPTPPG 345
G K SWG PPG
Sbjct: 285 NGNVTKLSWGKDRPPPG 301
>gi|45361397|ref|NP_989276.1| TIA1 cytotoxic granule-associated RNA binding protein [Xenopus
(Silurana) tropicalis]
gi|39795756|gb|AAH64164.1| TIA1 cytotoxic granule-associated RNA binding protein [Xenopus
(Silurana) tropicalis]
Length = 386
Score = 209 bits (532), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 121/301 (40%), Positives = 173/301 (57%), Gaps = 33/301 (10%)
Query: 57 RSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRRSAAMAILSL 114
R++YVGN+ VTEPL+ +VFS GP + CK+I + Y F+ +F+ R AA ++ ++
Sbjct: 7 RTLYVGNLSRDVTEPLILQVFSQLGPCKSCKMIMDTAGNDPYCFVEFFEHRHAAASLAAM 66
Query: 115 NGRHLFGQPIKVNWAYA-SGQREDTSG-----------HFNIFVGDLSPEVTDATLFACF 162
NGR + G+ +KVNWA S Q++D + HF++FVGDLSPE+T + A F
Sbjct: 67 NGRKIMGKEVKVNWATTPSSQKKDANSSSVVSTLRSQDHFHVFVGDLSPEITTDDIKAAF 126
Query: 163 SVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGA 222
+ + SDARV+ D TG+S+G+GFVSF N+ DA++AI + G+WLG RQIR NWAT+
Sbjct: 127 APFGRISDARVVKDMTTGKSKGYGFVSFFNKWDAENAIAQMGGQWLGGRQIRTNWATRKP 186
Query: 223 GNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRH 282
+ S+ K + +E N +P N TVY G + +T+ + +
Sbjct: 187 PAPKSTYESNTKQLTY---------EEVVNQSSPSN----CTVYCGGVTSGLTEQLMRQT 233
Query: 283 FHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSKPT 342
F G I EVRV DKG+ FVR+S+H AA AI N T + G +KC WG K T
Sbjct: 234 FSPFGQ--IMEVRVFPDKGYSFVRFSSHESAAHAIVSVNGTT---IEGHVVKCYWG-KET 287
Query: 343 P 343
P
Sbjct: 288 P 288
>gi|89272716|emb|CAJ83609.1| TIA1 cytotoxic granule-associated RNA binding protein [Xenopus
(Silurana) tropicalis]
Length = 389
Score = 209 bits (532), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 121/301 (40%), Positives = 173/301 (57%), Gaps = 33/301 (10%)
Query: 57 RSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRRSAAMAILSL 114
R++YVGN+ VTEPL+ +VFS GP + CK+I + Y F+ +F+ R AA ++ ++
Sbjct: 7 RTLYVGNLSRDVTEPLILQVFSQLGPCKSCKMIMDTAGNDPYCFVEFFEHRHAAASLAAM 66
Query: 115 NGRHLFGQPIKVNWAYA-SGQREDTSG-----------HFNIFVGDLSPEVTDATLFACF 162
NGR + G+ +KVNWA S Q++D + HF++FVGDLSPE+T + A F
Sbjct: 67 NGRKIMGKEVKVNWATTPSSQKKDANSSSVVSTLRSQDHFHVFVGDLSPEITTDDIKAAF 126
Query: 163 SVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGA 222
+ + SDARV+ D TG+S+G+GFVSF N+ DA++AI + G+WLG RQIR NWAT+
Sbjct: 127 APFGRISDARVVKDMTTGKSKGYGFVSFFNKWDAENAIAQMGGQWLGGRQIRTNWATRKP 186
Query: 223 GNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRH 282
+ S+ K + +E N +P N TVY G + +T+ + +
Sbjct: 187 PAPKSTYESNTKQLTY---------EEVVNQSSPSN----CTVYCGGVTSGLTEQLMRQT 233
Query: 283 FHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSKPT 342
F G I EVRV DKG+ FVR+S+H AA AI N T + G +KC WG K T
Sbjct: 234 FSPFGQ--IMEVRVFPDKGYSFVRFSSHESAAHAIVSVNGTT---IEGHVVKCYWG-KET 287
Query: 343 P 343
P
Sbjct: 288 P 288
>gi|348542282|ref|XP_003458614.1| PREDICTED: nucleolysin TIA-1 isoform p40-like [Oreochromis
niloticus]
Length = 386
Score = 209 bits (531), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 114/289 (39%), Positives = 166/289 (57%), Gaps = 21/289 (7%)
Query: 57 RSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRRSAAMAILSL 114
+++YVGN+ VTE L+ E+F GP + CK+I Y F+ +++ R A I ++
Sbjct: 7 KTLYVGNLSRDVTEALILELFGQIGPCKSCKMIVDTAGHDPYCFVEFYEHRHATATIAAM 66
Query: 115 NGRHLFGQPIKVNWAYA-SGQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARV 173
NGR + G+ +KVNWA + Q++DTS HF++FVGDLSPE+T + A F+ + SD RV
Sbjct: 67 NGRKILGKEVKVNWATTPTSQKKDTSSHFHVFVGDLSPEITTDDIKAAFAPFGKISDCRV 126
Query: 174 MWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSSDA 233
+ D TG+S+G+GFVSF N+ DA++AI + G+WLG RQIR NWAT+
Sbjct: 127 VKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATR---------KPAP 177
Query: 234 KSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEE 293
K+ E TN E N +P N TVY G + +T+ + + F G I E
Sbjct: 178 KTTSETTNTKQLSFDEVVNQSSPSN----CTVYCGGVTTGLTEQIMRQTFSPFGQ--IME 231
Query: 294 VRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSKPT 342
+RV +KG+ FVR+++H AA AI N T + G +KC WG + T
Sbjct: 232 IRVFPEKGYSFVRFNSHEAAAHAIVSVNGTS---IEGYVVKCYWGKETT 277
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 95/212 (44%), Gaps = 46/212 (21%)
Query: 144 IFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDL 203
++VG+LS +VT+A + F C +++ D T + FV F + A + I +
Sbjct: 9 LYVGNLSRDVTEALILELFGQIGPCKSCKMIVD--TAGHDPYCFVEFYEHRHATATIAAM 66
Query: 204 TGKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYT 263
G+ + ++++ NWAT T T ++ +
Sbjct: 67 NGRKILGKEVKVNWAT-------------------------------TPTSQKKDTSSHF 95
Query: 264 TVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRD------KGFGFVRYSTHAEAALAI 317
V+VG+L+PE+T D+ F G I + RV +D KG+GFV + +A AI
Sbjct: 96 HVFVGDLSPEITTDDIKAAFAPFGK--ISDCRVVKDMATGKSKGYGFVSFFNKWDAENAI 153
Query: 318 Q-MGNTTQSSYLFGKQMKCSWGSKPTPPGTSS 348
Q MG +L G+Q++ +W ++ P T+S
Sbjct: 154 QQMG----GQWLGGRQIRTNWATRKPAPKTTS 181
>gi|432884715|ref|XP_004074554.1| PREDICTED: nucleolysin TIA-1 isoform p40-like [Oryzias latipes]
Length = 386
Score = 208 bits (530), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 115/289 (39%), Positives = 169/289 (58%), Gaps = 21/289 (7%)
Query: 57 RSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLI--RKDKSSYGFIHYFDRRSAAMAILSL 114
+++YVGN+ VTE L+ E+F GP + CK+I Y F+ +++ R A I ++
Sbjct: 7 KTLYVGNLSRDVTEALILELFGQIGPCKSCKMIVDTAGHDPYCFVEFYEHRHATATIAAM 66
Query: 115 NGRHLFGQPIKVNWAYA-SGQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARV 173
NGR + G+ +KVNWA + Q++DTS HF++FVGDLSPE+T + A F+ + SD RV
Sbjct: 67 NGRKILGKEVKVNWATTPTSQKKDTSSHFHVFVGDLSPEITTDDIKAAFAPFGKISDCRV 126
Query: 174 MWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSSDA 233
+ D TG+S+G+GFVSF N+ DA++AI + G+WLG RQIR NWAT+ +SS +
Sbjct: 127 VKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPAPKTTNESSSS 186
Query: 234 KSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEE 293
K + S D E N +P N TVY G + +T+ + + F G I E
Sbjct: 187 KQL-------SFD--EVVNQSSPSN----CTVYCGGVTTGLTEQIMRQTFSPFGQ--IME 231
Query: 294 VRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSKPT 342
+RV +KG+ FVR+++H AA AI N T + G +KC WG + T
Sbjct: 232 IRVFPEKGYSFVRFNSHEAAAHAIVSVNGTS---IEGYVVKCYWGKETT 277
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 95/212 (44%), Gaps = 46/212 (21%)
Query: 144 IFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDL 203
++VG+LS +VT+A + F C +++ D T + FV F + A + I +
Sbjct: 9 LYVGNLSRDVTEALILELFGQIGPCKSCKMIVD--TAGHDPYCFVEFYEHRHATATIAAM 66
Query: 204 TGKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYT 263
G+ + ++++ NWAT T T ++ +
Sbjct: 67 NGRKILGKEVKVNWAT-------------------------------TPTSQKKDTSSHF 95
Query: 264 TVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRD------KGFGFVRYSTHAEAALAI 317
V+VG+L+PE+T D+ F G I + RV +D KG+GFV + +A AI
Sbjct: 96 HVFVGDLSPEITTDDIKAAFAPFGK--ISDCRVVKDMATGKSKGYGFVSFFNKWDAENAI 153
Query: 318 Q-MGNTTQSSYLFGKQMKCSWGSKPTPPGTSS 348
Q MG +L G+Q++ +W ++ P T++
Sbjct: 154 QQMG----GQWLGGRQIRTNWATRKPAPKTTN 181
>gi|226290334|gb|EEH45818.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Paracoccidioides brasiliensis Pb18]
Length = 508
Score = 208 bits (530), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 127/298 (42%), Positives = 167/298 (56%), Gaps = 33/298 (11%)
Query: 74 QEVFSSTGPVEGCKLIRKDKSS----YGFIHYFDRRSAAMAILSLNGR------------ 117
+ +F +TG V+ K+I DK+S YGF+ Y D +A A+ +LNGR
Sbjct: 101 RPIFETTGHVQSVKII-PDKNSKGLNYGFVEYDDPGAAERAMATLNGRRVHQSNYDIRSL 159
Query: 118 --HLFGQPIKVNWAYASG--QREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARV 173
H Q I+VNWAY S +EDTS HF+IFVGDLS EV D L FS + S S+ARV
Sbjct: 160 KPHPLQQEIRVNWAYQSNSNNKEDTSNHFHIFVGDLSNEVNDEVLLQAFSAFGSVSEARV 219
Query: 174 MWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT-KGAGNNEDKQSSD 232
MWD KTGRSRG+GFV+FR + DA+ A++ + G+WLGSR IRCNWA KG + +Q+
Sbjct: 220 MWDMKTGRSRGYGFVAFRERSDAEKALSSMDGEWLGSRAIRCNWANQKGQPSISQQQAMA 279
Query: 233 AKSVVELT----NGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGA 288
A + T + G ++ + + TT YVGNL P TQ DL F +
Sbjct: 280 AMGMTPTTPFGHHHFPTHGVQSYDMVVAQTPQWQTTCYVGNLTPYTTQNDLVPLFQNF-- 337
Query: 289 GVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSY-LFGKQMKCSWGSKPTPPG 345
G + E R Q D+GF FV+ TH AA+AI S Y + G+ +KCSWG P G
Sbjct: 338 GYVVETRFQADRGFAFVKMDTHENAAMAI----CQLSGYNVNGRPLKCSWGKDRPPTG 391
>gi|41054740|ref|NP_957426.1| nucleolysin TIAR [Danio rerio]
gi|33416339|gb|AAH55501.1| TIA1 cytotoxic granule-associated RNA binding protein-like 1 [Danio
rerio]
Length = 370
Score = 208 bits (530), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 121/305 (39%), Positives = 180/305 (59%), Gaps = 25/305 (8%)
Query: 52 DPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRRSAAM 109
D S +++YVGN+ VTE L+ ++F+ GP + CK+I + S+ Y F+ +F+ R AA
Sbjct: 3 DESHPKTLYVGNLSRDVTENLILQLFTQIGPCKSCKMITEHTSNDPYCFVEFFEHRDAAA 62
Query: 110 AILSLNGRHLFGQPIKVNWAYA-SGQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSC 168
A+ ++NGR + G+ +KVNWA S Q++DTS HF++FVGDLSPE+T + A F+ +
Sbjct: 63 ALAAMNGRKILGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTDDIRAAFAPFGKI 122
Query: 169 SDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDK 228
SDARV+ D TG+S+G+GFVSF N+ DA++AI + G+WLG RQIR NWAT+ +
Sbjct: 123 SDARVVKDMTTGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPAPKSV 182
Query: 229 QSSDAKSVV--ELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSL 286
Q + AK + E+ N SS PQ TVY G + +T+ + + F
Sbjct: 183 QDNSAKQLRFDEVVNQSS---------------PQNCTVYCGGIQSGLTEHLMRQTFSPF 227
Query: 287 GAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSKPTPPGT 346
G I E+RV +KG+ F+R+S+H AA AI N T + G +KC WG +
Sbjct: 228 GQ--IMEIRVFPEKGYSFIRFSSHESAAHAIVSVNGTT---IEGHVVKCYWGKESPDMAK 282
Query: 347 SSNPL 351
+ P+
Sbjct: 283 NVQPM 287
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 99/213 (46%), Gaps = 42/213 (19%)
Query: 136 EDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQD 195
ED S ++VG+LS +VT+ + F+ C +++ + + + FV F +D
Sbjct: 2 EDESHPKTLYVGNLSRDVTENLILQLFTQIGPCKSCKMITEHTSNDP--YCFVEFFEHRD 59
Query: 196 AQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEA 255
A +A+ + G+ + ++++ NWAT S K+T+N
Sbjct: 60 AAAALAAMNGRKILGKEVKVNWATT----------------------PSSQKKDTSN--- 94
Query: 256 PENNPQYTTVYVGNLAPEVTQLDLHRHFHSLG----AGVIEEVRVQRDKGFGFVRYSTHA 311
+ V+VG+L+PE+T D+ F G A V++++ + KG+GFV +
Sbjct: 95 ------HFHVFVGDLSPEITTDDIRAAFAPFGKISDARVVKDMTTGKSKGYGFVSFYNKL 148
Query: 312 EAALAI-QMGNTTQSSYLFGKQMKCSWGSKPTP 343
+A AI MG +L G+Q++ +W ++ P
Sbjct: 149 DAENAIVHMG----GQWLGGRQIRTNWATRKPP 177
>gi|14714709|gb|AAH10496.1| Tial1 protein [Mus musculus]
gi|148685700|gb|EDL17647.1| Tial1 cytotoxic granule-associated RNA binding protein-like 1,
isoform CRA_a [Mus musculus]
gi|149067624|gb|EDM17176.1| Tial1 cytotoxic granule-associated RNA binding protein-like 1
(mapped), isoform CRA_d [Rattus norvegicus]
Length = 375
Score = 208 bits (529), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 117/287 (40%), Positives = 175/287 (60%), Gaps = 21/287 (7%)
Query: 57 RSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRRSAAMAILSL 114
R++YVGN+ VTE L+ ++FS GP + CK+I + S+ Y F+ +++ R AA A+ ++
Sbjct: 9 RTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSNDPYCFVEFYEHRDAAAALAAM 68
Query: 115 NGRHLFGQPIKVNWAYA-SGQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARV 173
NGR + G+ +KVNWA S Q++DTS HF++FVGDLSPE+T + + F+ + SDARV
Sbjct: 69 NGRKILGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARV 128
Query: 174 MWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSSDA 233
+ D TG+S+G+GFVSF N+ DA++AI + G+WLG RQIR NWAT+ + Q ++
Sbjct: 129 VKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQETNT 188
Query: 234 KSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEE 293
K + ++ N +P+N TVY G +A +T + + F G I E
Sbjct: 189 KQL---------RFEDVVNQSSPKN----CTVYCGGIASGLTDQLMRQTFSPFGQ--IME 233
Query: 294 VRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSK 340
+RV +KG+ FVR+STH AA AI N T + G +KC WG +
Sbjct: 234 IRVFPEKGYSFVRFSTHESAAHAIVSVNGTT---IEGHVVKCYWGKE 277
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 98/213 (46%), Gaps = 42/213 (19%)
Query: 136 EDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQD 195
ED ++VG+LS +VT+ + FS C +++ + + + FV F +D
Sbjct: 3 EDDGQPRTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSNDP--YCFVEFYEHRD 60
Query: 196 AQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEA 255
A +A+ + G+ + ++++ NWAT S K+T+N
Sbjct: 61 AAAALAAMNGRKILGKEVKVNWATT----------------------PSSQKKDTSN--- 95
Query: 256 PENNPQYTTVYVGNLAPEVTQLDLHRHFHSLG----AGVIEEVRVQRDKGFGFVRYSTHA 311
+ V+VG+L+PE+T D+ F G A V++++ + KG+GFV +
Sbjct: 96 ------HFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKL 149
Query: 312 EAALAI-QMGNTTQSSYLFGKQMKCSWGSKPTP 343
+A AI MG +L G+Q++ +W ++ P
Sbjct: 150 DAENAIVHMG----GQWLGGRQIRTNWATRKPP 178
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/204 (21%), Positives = 86/204 (42%), Gaps = 29/204 (14%)
Query: 52 DPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRK----DKSSYGFIHYFDRRSA 107
D S V+VG++ ++T ++ F+ G + ++++ YGF+ ++++ A
Sbjct: 92 DTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDA 151
Query: 108 AMAILSLNGRHLFGQPIKVNWAY------ASGQREDTS-------------GHFNIFVGD 148
AI+ + G+ L G+ I+ NWA S Q +T + ++ G
Sbjct: 152 ENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQETNTKQLRFEDVVNQSSPKNCTVYCGG 211
Query: 149 LSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWL 208
++ +TD + FS + + RV +G+ FV F + A AI + G +
Sbjct: 212 IASGLTDQLMRQTFSPFGQIMEIRVF------PEKGYSFVRFSTHESAAHAIVSVNGTTI 265
Query: 209 GSRQIRCNWATKGAGNNEDKQSSD 232
++C W + ++ Q D
Sbjct: 266 EGHVVKCYWGKESPDMTKNFQQVD 289
>gi|54303906|gb|AAV33303.1| aging-associated gene 7 protein [Homo sapiens]
Length = 374
Score = 207 bits (528), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 117/287 (40%), Positives = 175/287 (60%), Gaps = 21/287 (7%)
Query: 57 RSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRRSAAMAILSL 114
R++YVGN+ VTE L+ ++FS GP + CK+I + S+ Y F+ +++ R AA A+ ++
Sbjct: 9 RTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSNDPYCFVEFYEHRDAAAALAAM 68
Query: 115 NGRHLFGQPIKVNWAYA-SGQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARV 173
NGR + G+ +KVNWA S Q++DTS HF++FVGDLSPE+T + + F+ + SDARV
Sbjct: 69 NGRKILGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARV 128
Query: 174 MWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSSDA 233
+ D TG+S+G+GFVSF N+ DA++AI + G+WLG RQIR NWAT+ + Q ++
Sbjct: 129 VKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQENNT 188
Query: 234 KSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEE 293
K + ++ N +P+N TVY G +A +T + + F G I E
Sbjct: 189 KQL---------RFEDVVNQSSPKN----CTVYCGGIASGLTDQLMRQTFSPFGQ--IME 233
Query: 294 VRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSK 340
+RV +KG+ FVR+STH AA AI N T + G +KC WG +
Sbjct: 234 IRVFPEKGYSFVRFSTHESAAHAIVSVNGTT---IEGHVVKCYWGKE 277
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 101/221 (45%), Gaps = 44/221 (19%)
Query: 136 EDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQD 195
ED ++VG+LS +VT+ + FS C +++ + + + FV F +D
Sbjct: 3 EDDGQPRTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSNDP--YCFVEFYEHRD 60
Query: 196 AQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEA 255
A +A+ + G+ + ++++ NWAT S K+T+N
Sbjct: 61 AAAALAAMNGRKILGKEVKVNWATT----------------------PSSQKKDTSN--- 95
Query: 256 PENNPQYTTVYVGNLAPEVTQLDLHRHFHSLG----AGVIEEVRVQRDKGFGFVRYSTHA 311
+ V+VG+L+PE+T D+ F G A V++++ + KG+GFV +
Sbjct: 96 ------HFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKL 149
Query: 312 EAALAI-QMGNTTQSSYLFGKQMKCSWGSK--PTPPGTSSN 349
+A AI MG +L G+Q++ +W ++ P P T N
Sbjct: 150 DAENAIVHMG----GQWLGGRQIRTNWATRKPPAPKSTQEN 186
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/204 (21%), Positives = 86/204 (42%), Gaps = 29/204 (14%)
Query: 52 DPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRK----DKSSYGFIHYFDRRSA 107
D S V+VG++ ++T ++ F+ G + ++++ YGF+ ++++ A
Sbjct: 92 DTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDA 151
Query: 108 AMAILSLNGRHLFGQPIKVNWAY------ASGQREDTS-------------GHFNIFVGD 148
AI+ + G+ L G+ I+ NWA S Q +T + ++ G
Sbjct: 152 ENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYCGG 211
Query: 149 LSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWL 208
++ +TD + FS + + RV +G+ FV F + A AI + G +
Sbjct: 212 IASGLTDQLMRQTFSPFGQIMEIRVF------PEKGYSFVRFSTHESAAHAIVSVNGTTI 265
Query: 209 GSRQIRCNWATKGAGNNEDKQSSD 232
++C W + ++ Q D
Sbjct: 266 EGHVVKCYWGKESPDMTKNFQQVD 289
>gi|126273035|ref|XP_001367894.1| PREDICTED: nucleolysin TIAR isoform 2 [Monodelphis domestica]
Length = 371
Score = 207 bits (528), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 117/287 (40%), Positives = 174/287 (60%), Gaps = 21/287 (7%)
Query: 57 RSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRRSAAMAILSL 114
R++YVGN+ VTE L+ ++FS GP + CK+I + S+ Y F+ +++ R AA A+ ++
Sbjct: 8 RTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSNDPYCFVEFYEHRDAAAALAAM 67
Query: 115 NGRHLFGQPIKVNWAYA-SGQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARV 173
NGR + G+ +KVNWA S Q++DTS HF++FVGDLSPE+T + + F+ + SDARV
Sbjct: 68 NGRKILGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARV 127
Query: 174 MWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSSDA 233
+ D TG+S+G+GFVSF N+ DA++AI + G+WLG RQIR NWAT+ + Q +
Sbjct: 128 VKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQENST 187
Query: 234 KSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEE 293
K + ++ N +P+N TVY G +A +T + + F G I E
Sbjct: 188 KQL---------RFEDVVNQSSPKN----CTVYCGGIASGLTDQLMRQTFSPFGQ--IME 232
Query: 294 VRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSK 340
+RV +KG+ FVR+STH AA AI N T + G +KC WG +
Sbjct: 233 IRVFPEKGYSFVRFSTHESAAHAIVSVNGTT---IEGHVVKCYWGKE 276
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 101/221 (45%), Gaps = 44/221 (19%)
Query: 136 EDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQD 195
ED ++VG+LS +VT+ + FS C +++ + + + FV F +D
Sbjct: 2 EDDGQPRTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSNDP--YCFVEFYEHRD 59
Query: 196 AQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEA 255
A +A+ + G+ + ++++ NWAT S K+T+N
Sbjct: 60 AAAALAAMNGRKILGKEVKVNWATT----------------------PSSQKKDTSN--- 94
Query: 256 PENNPQYTTVYVGNLAPEVTQLDLHRHFHSLG----AGVIEEVRVQRDKGFGFVRYSTHA 311
+ V+VG+L+PE+T D+ F G A V++++ + KG+GFV +
Sbjct: 95 ------HFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKL 148
Query: 312 EAALAI-QMGNTTQSSYLFGKQMKCSWGSK--PTPPGTSSN 349
+A AI MG +L G+Q++ +W ++ P P T N
Sbjct: 149 DAENAIVHMG----GQWLGGRQIRTNWATRKPPAPKSTQEN 185
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/204 (19%), Positives = 85/204 (41%), Gaps = 29/204 (14%)
Query: 52 DPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRK----DKSSYGFIHYFDRRSA 107
D S V+VG++ ++T ++ F+ G + ++++ YGF+ ++++ A
Sbjct: 91 DTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDA 150
Query: 108 AMAILSLNGRHLFGQPIKVNWA-------------------YASGQREDTSGHFNIFVGD 148
AI+ + G+ L G+ I+ NWA + + + + ++ G
Sbjct: 151 ENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQENSTKQLRFEDVVNQSSPKNCTVYCGG 210
Query: 149 LSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWL 208
++ +TD + FS + + RV +G+ FV F + A AI + G +
Sbjct: 211 IASGLTDQLMRQTFSPFGQIMEIRVF------PEKGYSFVRFSTHESAAHAIVSVNGTTI 264
Query: 209 GSRQIRCNWATKGAGNNEDKQSSD 232
++C W + ++ Q D
Sbjct: 265 EGHVVKCYWGKESPDMTKNFQQVD 288
>gi|4507499|ref|NP_003243.1| nucleolysin TIAR isoform 1 [Homo sapiens]
gi|194205608|ref|XP_001492932.2| PREDICTED: nucleolysin TIAR isoform 2 [Equus caballus]
gi|311271909|ref|XP_001928970.2| PREDICTED: nucleolysin TIAR isoform 1 [Sus scrofa]
gi|332835148|ref|XP_001154534.2| PREDICTED: nucleolysin TIAR isoform 2 [Pan troglodytes]
gi|345792875|ref|XP_865423.2| PREDICTED: nucleolysin TIAR isoform 18 [Canis lupus familiaris]
gi|390473245|ref|XP_002756491.2| PREDICTED: nucleolysin TIAR isoform 1 [Callithrix jacchus]
gi|395827975|ref|XP_003787163.1| PREDICTED: nucleolysin TIAR isoform 2 [Otolemur garnettii]
gi|397510637|ref|XP_003825699.1| PREDICTED: nucleolysin TIAR isoform 1 [Pan paniscus]
gi|402881650|ref|XP_003904379.1| PREDICTED: nucleolysin TIAR isoform 1 [Papio anubis]
gi|403259379|ref|XP_003922194.1| PREDICTED: nucleolysin TIAR [Saimiri boliviensis boliviensis]
gi|426253184|ref|XP_004020280.1| PREDICTED: nucleolysin TIAR isoform 1 [Ovis aries]
gi|426366372|ref|XP_004050232.1| PREDICTED: nucleolysin TIAR isoform 1 [Gorilla gorilla gorilla]
gi|267131|sp|Q01085.1|TIAR_HUMAN RecName: Full=Nucleolysin TIAR; AltName: Full=TIA-1-related protein
gi|189310|gb|AAA36384.1| nucleolysin TIAR [Homo sapiens]
gi|158254826|dbj|BAF83384.1| unnamed protein product [Homo sapiens]
gi|261858270|dbj|BAI45657.1| TIA1 cytotoxic granule-associated RNA binding protein-like 1
[synthetic construct]
gi|380783711|gb|AFE63731.1| nucleolysin TIAR isoform 1 [Macaca mulatta]
gi|383408329|gb|AFH27378.1| nucleolysin TIAR isoform 1 [Macaca mulatta]
gi|384942770|gb|AFI34990.1| nucleolysin TIAR isoform 1 [Macaca mulatta]
gi|410218474|gb|JAA06456.1| TIA1 cytotoxic granule-associated RNA binding protein-like 1 [Pan
troglodytes]
gi|410257382|gb|JAA16658.1| TIA1 cytotoxic granule-associated RNA binding protein-like 1 [Pan
troglodytes]
gi|410296996|gb|JAA27098.1| TIA1 cytotoxic granule-associated RNA binding protein-like 1 [Pan
troglodytes]
Length = 375
Score = 207 bits (528), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 117/287 (40%), Positives = 175/287 (60%), Gaps = 21/287 (7%)
Query: 57 RSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRRSAAMAILSL 114
R++YVGN+ VTE L+ ++FS GP + CK+I + S+ Y F+ +++ R AA A+ ++
Sbjct: 9 RTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSNDPYCFVEFYEHRDAAAALAAM 68
Query: 115 NGRHLFGQPIKVNWAYA-SGQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARV 173
NGR + G+ +KVNWA S Q++DTS HF++FVGDLSPE+T + + F+ + SDARV
Sbjct: 69 NGRKILGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARV 128
Query: 174 MWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSSDA 233
+ D TG+S+G+GFVSF N+ DA++AI + G+WLG RQIR NWAT+ + Q ++
Sbjct: 129 VKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQENNT 188
Query: 234 KSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEE 293
K + ++ N +P+N TVY G +A +T + + F G I E
Sbjct: 189 KQL---------RFEDVVNQSSPKN----CTVYCGGIASGLTDQLMRQTFSPFGQ--IME 233
Query: 294 VRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSK 340
+RV +KG+ FVR+STH AA AI N T + G +KC WG +
Sbjct: 234 IRVFPEKGYSFVRFSTHESAAHAIVSVNGTT---IEGHVVKCYWGKE 277
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 101/221 (45%), Gaps = 44/221 (19%)
Query: 136 EDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQD 195
ED ++VG+LS +VT+ + FS C +++ + + + FV F +D
Sbjct: 3 EDDGQPRTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSNDP--YCFVEFYEHRD 60
Query: 196 AQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEA 255
A +A+ + G+ + ++++ NWAT S K+T+N
Sbjct: 61 AAAALAAMNGRKILGKEVKVNWATT----------------------PSSQKKDTSN--- 95
Query: 256 PENNPQYTTVYVGNLAPEVTQLDLHRHFHSLG----AGVIEEVRVQRDKGFGFVRYSTHA 311
+ V+VG+L+PE+T D+ F G A V++++ + KG+GFV +
Sbjct: 96 ------HFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKL 149
Query: 312 EAALAI-QMGNTTQSSYLFGKQMKCSWGSK--PTPPGTSSN 349
+A AI MG +L G+Q++ +W ++ P P T N
Sbjct: 150 DAENAIVHMG----GQWLGGRQIRTNWATRKPPAPKSTQEN 186
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/204 (21%), Positives = 86/204 (42%), Gaps = 29/204 (14%)
Query: 52 DPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRK----DKSSYGFIHYFDRRSA 107
D S V+VG++ ++T ++ F+ G + ++++ YGF+ ++++ A
Sbjct: 92 DTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDA 151
Query: 108 AMAILSLNGRHLFGQPIKVNWAY------ASGQREDTS-------------GHFNIFVGD 148
AI+ + G+ L G+ I+ NWA S Q +T + ++ G
Sbjct: 152 ENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYCGG 211
Query: 149 LSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWL 208
++ +TD + FS + + RV +G+ FV F + A AI + G +
Sbjct: 212 IASGLTDQLMRQTFSPFGQIMEIRVF------PEKGYSFVRFSTHESAAHAIVSVNGTTI 265
Query: 209 GSRQIRCNWATKGAGNNEDKQSSD 232
++C W + ++ Q D
Sbjct: 266 EGHVVKCYWGKESPDMTKNFQQVD 289
>gi|300796220|ref|NP_001179985.1| nucleolysin TIAR [Bos taurus]
gi|296472594|tpg|DAA14709.1| TPA: TIA1 cytotoxic granule-associated RNA binding protein-like 1
[Bos taurus]
Length = 380
Score = 207 bits (527), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 117/287 (40%), Positives = 175/287 (60%), Gaps = 21/287 (7%)
Query: 57 RSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRRSAAMAILSL 114
R++YVGN+ VTE L+ ++FS GP + CK+I + S+ Y F+ +++ R AA A+ ++
Sbjct: 9 RTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSNDPYCFVEFYEHRDAAAALAAM 68
Query: 115 NGRHLFGQPIKVNWAYA-SGQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARV 173
NGR + G+ +KVNWA S Q++DTS HF++FVGDLSPE+T + + F+ + SDARV
Sbjct: 69 NGRKILGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARV 128
Query: 174 MWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSSDA 233
+ D TG+S+G+GFVSF N+ DA++AI + G+WLG RQIR NWAT+ + Q ++
Sbjct: 129 VKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQENNT 188
Query: 234 KSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEE 293
K + ++ N +P+N TVY G +A +T + + F G I E
Sbjct: 189 KQL---------RFEDVVNQSSPKN----CTVYCGGIASGLTDQLMRQTFSPFGQ--IME 233
Query: 294 VRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSK 340
+RV +KG+ FVR+STH AA AI N T + G +KC WG +
Sbjct: 234 IRVFPEKGYSFVRFSTHESAAHAIVSVNGTT---IEGHVVKCYWGKE 277
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 101/221 (45%), Gaps = 44/221 (19%)
Query: 136 EDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQD 195
ED ++VG+LS +VT+ + FS C +++ + + + FV F +D
Sbjct: 3 EDDGQPRTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSNDP--YCFVEFYEHRD 60
Query: 196 AQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEA 255
A +A+ + G+ + ++++ NWAT S K+T+N
Sbjct: 61 AAAALAAMNGRKILGKEVKVNWATT----------------------PSSQKKDTSN--- 95
Query: 256 PENNPQYTTVYVGNLAPEVTQLDLHRHFHSLG----AGVIEEVRVQRDKGFGFVRYSTHA 311
+ V+VG+L+PE+T D+ F G A V++++ + KG+GFV +
Sbjct: 96 ------HFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKL 149
Query: 312 EAALAI-QMGNTTQSSYLFGKQMKCSWGSK--PTPPGTSSN 349
+A AI MG +L G+Q++ +W ++ P P T N
Sbjct: 150 DAENAIVHMG----GQWLGGRQIRTNWATRKPPAPKSTQEN 186
>gi|291404907|ref|XP_002718787.1| PREDICTED: TIA-1 related protein-like [Oryctolagus cuniculus]
Length = 450
Score = 207 bits (527), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 122/306 (39%), Positives = 181/306 (59%), Gaps = 30/306 (9%)
Query: 42 IPSGNL----PPGFDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS-- 95
+P+G+L PG P YVGN+ VTE L+ ++FS GP + CK+I + S+
Sbjct: 70 VPAGHLGEETRPGASPR-----YVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSNDP 124
Query: 96 YGFIHYFDRRSAAMAILSLNGRHLFGQPIKVNWAYA-SGQREDTSGHFNIFVGDLSPEVT 154
Y F+ +++ R AA A+ ++NGR + G+ +KVNWA S Q++DTS HF++FVGDLSPE+T
Sbjct: 125 YCFVEFYEHRDAAAALAAMNGRKILGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEIT 184
Query: 155 DATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIR 214
+ + F+ + SDARV+ D TG+S+G+GFVSF N+ DA++AI + G+WLG RQIR
Sbjct: 185 TEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIR 244
Query: 215 CNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEV 274
NWAT+ + Q ++ K + ++ N +P+N TVY G +A +
Sbjct: 245 TNWATRKPPAPKSTQENNTKQL---------RFEDVVNQSSPKN----CTVYCGGIASGL 291
Query: 275 TQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMK 334
T + + F G I E+RV +KG+ FVR+STH AA AI N T + G +K
Sbjct: 292 TDQLMRQTFSPFGQ--IMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTT---IEGHVVK 346
Query: 335 CSWGSK 340
C WG +
Sbjct: 347 CYWGKE 352
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/204 (21%), Positives = 86/204 (42%), Gaps = 29/204 (14%)
Query: 52 DPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRK----DKSSYGFIHYFDRRSA 107
D S V+VG++ ++T ++ F+ G + ++++ YGF+ ++++ A
Sbjct: 167 DTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDA 226
Query: 108 AMAILSLNGRHLFGQPIKVNWAY------ASGQREDTS-------------GHFNIFVGD 148
AI+ + G+ L G+ I+ NWA S Q +T + ++ G
Sbjct: 227 ENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYCGG 286
Query: 149 LSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWL 208
++ +TD + FS + + RV +G+ FV F + A AI + G +
Sbjct: 287 IASGLTDQLMRQTFSPFGQIMEIRVF------PEKGYSFVRFSTHESAAHAIVSVNGTTI 340
Query: 209 GSRQIRCNWATKGAGNNEDKQSSD 232
++C W + ++ Q D
Sbjct: 341 EGHVVKCYWGKESPDMTKNFQQVD 364
>gi|16215606|emb|CAC95018.1| TIA-1 protein [Xenopus laevis]
Length = 388
Score = 206 bits (525), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 119/301 (39%), Positives = 174/301 (57%), Gaps = 33/301 (10%)
Query: 57 RSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRRSAAMAILSL 114
+++YVGN+ VTEPL+ +VFS GP + CK+I + Y F+ +F+ R AA ++ ++
Sbjct: 7 KTLYVGNLSRDVTEPLILQVFSQLGPCKSCKMIMDTAGNDPYCFVEFFEHRHAAASLAAI 66
Query: 115 NGRHLFGQPIKVNWAYA-SGQREDTSG-----------HFNIFVGDLSPEVTDATLFACF 162
NGR + G+ +KVNWA S Q++D + HF++FVGDLSPE++ + A F
Sbjct: 67 NGRKILGKEVKVNWATTPSSQKKDANSSSVVSTLRSQDHFHVFVGDLSPEISTDDIKAAF 126
Query: 163 SVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGA 222
+ + SDARV+ D TG+S+G+GFVSF N+ DA++AI + G+WLG RQIR NWAT+
Sbjct: 127 APFGRISDARVVKDMTTGKSKGYGFVSFFNKWDAENAIAQMGGQWLGGRQIRTNWATRKP 186
Query: 223 GNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRH 282
+ S+AK + +E N +P N TVY G + +++ + +
Sbjct: 187 PAPKSTFESNAKQLTY---------EEVVNQSSPSN----CTVYCGGVTSGLSEQLMRQT 233
Query: 283 FHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSKPT 342
F G I EVRV DKG+ FVR+S+H AA AI N T + G +KC WG K T
Sbjct: 234 FSPFGQ--IMEVRVFPDKGYSFVRFSSHESAAHAIVSVNGTT---IEGHVVKCYWG-KET 287
Query: 343 P 343
P
Sbjct: 288 P 288
>gi|158255914|dbj|BAF83928.1| unnamed protein product [Homo sapiens]
Length = 375
Score = 206 bits (524), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 116/287 (40%), Positives = 174/287 (60%), Gaps = 21/287 (7%)
Query: 57 RSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRRSAAMAILSL 114
R++YVGN+ VTE L+ ++FS GP + CK+I + S+ Y F+ +++ R AA A+ ++
Sbjct: 9 RTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSNDPYCFVEFYEHRDAAAALAAM 68
Query: 115 NGRHLFGQPIKVNWAYA-SGQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARV 173
NGR + G+ +KVNWA S Q++DTS HF++FVGDLSPE+T + + F+ + SDARV
Sbjct: 69 NGRKILGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARV 128
Query: 174 MWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSSDA 233
+ D TG+S+G+GFVSF N+ D ++AI + G+WLG RQIR NWAT+ + Q ++
Sbjct: 129 VKDMATGKSKGYGFVSFYNKLDGENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQENNT 188
Query: 234 KSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEE 293
K + ++ N +P+N TVY G +A +T + + F G I E
Sbjct: 189 KQL---------RFEDVVNQSSPKN----CTVYCGGIASGLTDQLMRQTFSPFGQ--IME 233
Query: 294 VRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSK 340
+RV +KG+ FVR+STH AA AI N T + G +KC WG +
Sbjct: 234 IRVFPEKGYSFVRFSTHESAAHAIVSVNGTT---IEGHVVKCYWGKE 277
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 100/221 (45%), Gaps = 44/221 (19%)
Query: 136 EDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQD 195
ED ++VG+LS +VT+ + FS C +++ + + + FV F +D
Sbjct: 3 EDDGQPRTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSNDP--YCFVEFYEHRD 60
Query: 196 AQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEA 255
A +A+ + G+ + ++++ NWAT S K+T+N
Sbjct: 61 AAAALAAMNGRKILGKEVKVNWATT----------------------PSSQKKDTSN--- 95
Query: 256 PENNPQYTTVYVGNLAPEVTQLDLHRHFHSLG----AGVIEEVRVQRDKGFGFVRYSTHA 311
+ V+VG+L+PE+T D+ F G A V++++ + KG+GFV +
Sbjct: 96 ------HFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKL 149
Query: 312 EAALAI-QMGNTTQSSYLFGKQMKCSWGSK--PTPPGTSSN 349
+ AI MG +L G+Q++ +W ++ P P T N
Sbjct: 150 DGENAIVHMG----GQWLGGRQIRTNWATRKPPAPKSTQEN 186
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/204 (20%), Positives = 85/204 (41%), Gaps = 29/204 (14%)
Query: 52 DPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRK----DKSSYGFIHYFDRRSA 107
D S V+VG++ ++T ++ F+ G + ++++ YGF+ ++++
Sbjct: 92 DTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDG 151
Query: 108 AMAILSLNGRHLFGQPIKVNWAY------ASGQREDTS-------------GHFNIFVGD 148
AI+ + G+ L G+ I+ NWA S Q +T + ++ G
Sbjct: 152 ENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYCGG 211
Query: 149 LSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWL 208
++ +TD + FS + + RV +G+ FV F + A AI + G +
Sbjct: 212 IASGLTDQLMRQTFSPFGQIMEIRVF------PEKGYSFVRFSTHESAAHAIVSVNGTTI 265
Query: 209 GSRQIRCNWATKGAGNNEDKQSSD 232
++C W + ++ Q D
Sbjct: 266 EGHVVKCYWGKESPDMTKNFQQVD 289
>gi|297307145|ref|NP_001167497.1| TIA1 cytotoxic granule-associated RNA binding protein-like 1
[Xenopus laevis]
gi|50416510|gb|AAH77169.1| Unknown (protein for MGC:78766) [Xenopus laevis]
Length = 385
Score = 206 bits (524), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 119/301 (39%), Positives = 174/301 (57%), Gaps = 33/301 (10%)
Query: 57 RSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRRSAAMAILSL 114
+++YVGN+ VTEPL+ +VFS GP + CK+I + Y F+ +F+ R AA ++ ++
Sbjct: 7 KTLYVGNLSRDVTEPLILQVFSQLGPCKSCKMIMDTAGNDPYCFVEFFEHRHAAASLAAI 66
Query: 115 NGRHLFGQPIKVNWAYA-SGQREDTSG-----------HFNIFVGDLSPEVTDATLFACF 162
NGR + G+ +KVNWA S Q++D + HF++FVGDLSPE++ + A F
Sbjct: 67 NGRKILGKEVKVNWATTPSSQKKDANSSSVVSTLRSQDHFHVFVGDLSPEISTDDIKAAF 126
Query: 163 SVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGA 222
+ + SDARV+ D TG+S+G+GFVSF N+ DA++AI + G+WLG RQIR NWAT+
Sbjct: 127 APFGRISDARVVKDMTTGKSKGYGFVSFFNKWDAENAIAQMGGQWLGGRQIRTNWATRKP 186
Query: 223 GNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRH 282
+ S+AK + +E N +P N TVY G + +++ + +
Sbjct: 187 PAPKSTFESNAKQLTY---------EEVVNQSSPSN----CTVYCGGVTSGLSEQLMRQT 233
Query: 283 FHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSKPT 342
F G I EVRV DKG+ FVR+S+H AA AI N T + G +KC WG K T
Sbjct: 234 FSPFGQ--IMEVRVFPDKGYSFVRFSSHESAAHAIVSVNGTT---IEGHVVKCYWG-KET 287
Query: 343 P 343
P
Sbjct: 288 P 288
>gi|449506038|ref|XP_002188262.2| PREDICTED: nucleolysin TIAR [Taeniopygia guttata]
Length = 453
Score = 206 bits (524), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 116/285 (40%), Positives = 172/285 (60%), Gaps = 21/285 (7%)
Query: 59 VYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRRSAAMAILSLNG 116
YVGN+ VTE L+ ++FS GP + CK+I + S+ Y F+ +++ R AA A+ ++NG
Sbjct: 92 CYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSNDPYCFVEFYEHRDAAAALAAMNG 151
Query: 117 RHLFGQPIKVNWAYA-SGQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMW 175
R + G+ +KVNWA S Q++DTS HF++FVGDLSPE+T + + F+ + SDARV+
Sbjct: 152 RKILGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVK 211
Query: 176 DQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSSDAKS 235
D TG+S+G+GFVSF N+ DA++AI + G+WLG RQIR NWAT+ + Q ++ K
Sbjct: 212 DMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQENNTKQ 271
Query: 236 VVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVR 295
+ ++ N +P+N TVY G +A +T + + F G I E+R
Sbjct: 272 L---------RFEDVVNQSSPKN----CTVYCGGIASGLTDQLMRQTFSPFGQ--IMEIR 316
Query: 296 VQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSK 340
V +KG+ FVR+STH AA AI N T + G +KC WG +
Sbjct: 317 VFPEKGYSFVRFSTHESAAHAIVSVNGTT---IEGHVVKCYWGKE 358
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/204 (21%), Positives = 86/204 (42%), Gaps = 29/204 (14%)
Query: 52 DPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRK----DKSSYGFIHYFDRRSA 107
D S V+VG++ ++T ++ F+ G + ++++ YGF+ ++++ A
Sbjct: 173 DTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDA 232
Query: 108 AMAILSLNGRHLFGQPIKVNWAY------ASGQREDTS-------------GHFNIFVGD 148
AI+ + G+ L G+ I+ NWA S Q +T + ++ G
Sbjct: 233 ENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYCGG 292
Query: 149 LSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWL 208
++ +TD + FS + + RV +G+ FV F + A AI + G +
Sbjct: 293 IASGLTDQLMRQTFSPFGQIMEIRVF------PEKGYSFVRFSTHESAAHAIVSVNGTTI 346
Query: 209 GSRQIRCNWATKGAGNNEDKQSSD 232
++C W + ++ Q D
Sbjct: 347 EGHVVKCYWGKESPDMTKNFQQVD 370
>gi|426223384|ref|XP_004005855.1| PREDICTED: nucleolysin TIA-1 isoform p40 isoform 2 [Ovis aries]
Length = 375
Score = 206 bits (523), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 117/287 (40%), Positives = 172/287 (59%), Gaps = 21/287 (7%)
Query: 57 RSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRRSAAMAILSL 114
+++YVGN+ VTE L+ ++FS GP + CK+I + Y F+ +++ R AA A+ ++
Sbjct: 7 KTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFYEHRHAAAALAAM 66
Query: 115 NGRHLFGQPIKVNWAYA-SGQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARV 173
NGR + G+ +KVNWA S Q++DTS HF++FVGDLSPE+T + A F+ + SDARV
Sbjct: 67 NGRKIMGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKAAFAPFGRISDARV 126
Query: 174 MWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSSDA 233
+ D TG+S+G+GFVSF N+ DA++AI + G+WLG RQIR NWAT+ + S+
Sbjct: 127 VKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAPKSTYESNT 186
Query: 234 KSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEE 293
K + S D E N +P N TVY G + +T+ + + F G I E
Sbjct: 187 KQL-------SYD--EVVNQSSPSN----CTVYCGGVTSGLTEQLMRQTFSPFGQ--IME 231
Query: 294 VRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSK 340
+RV DKG+ FVR+++H AA AI N T + G +KC WG +
Sbjct: 232 IRVFPDKGYSFVRFNSHESAAHAIVSVNGTT---IEGHVVKCYWGKE 275
>gi|344283909|ref|XP_003413713.1| PREDICTED: nucleolysin TIA-1 isoform p40 isoform 2 [Loxodonta
africana]
Length = 375
Score = 206 bits (523), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 117/287 (40%), Positives = 172/287 (59%), Gaps = 21/287 (7%)
Query: 57 RSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRRSAAMAILSL 114
+++YVGN+ VTE L+ ++FS GP + CK+I + Y F+ +++ R AA A+ ++
Sbjct: 7 KTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFYEHRHAAAALAAM 66
Query: 115 NGRHLFGQPIKVNWAYA-SGQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARV 173
NGR + G+ +KVNWA S Q++DTS HF++FVGDLSPE+T + A F+ + SDARV
Sbjct: 67 NGRKIMGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKAAFAPFGRISDARV 126
Query: 174 MWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSSDA 233
+ D TG+S+G+GFVSF N+ DA++AI + G+WLG RQIR NWAT+ + S+
Sbjct: 127 VKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAPKSTYESNT 186
Query: 234 KSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEE 293
K + S D E N +P N TVY G + +T+ + + F G I E
Sbjct: 187 KQL-------SYD--EVVNQSSPSN----CTVYCGGVTSGLTEQLMRQTFSPFGQ--IME 231
Query: 294 VRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSK 340
+RV DKG+ FVR+++H AA AI N T + G +KC WG +
Sbjct: 232 IRVFPDKGYSFVRFNSHESAAHAIVSVNGTT---IEGHVVKCYWGKE 275
>gi|301758210|ref|XP_002914948.1| PREDICTED: nucleolysin TIA-1 isoform p40-like isoform 2 [Ailuropoda
melanoleuca]
gi|410954993|ref|XP_003984143.1| PREDICTED: nucleolysin TIA-1 isoform p40 isoform 1 [Felis catus]
Length = 375
Score = 205 bits (522), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 117/287 (40%), Positives = 172/287 (59%), Gaps = 21/287 (7%)
Query: 57 RSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRRSAAMAILSL 114
+++YVGN+ VTE L+ ++FS GP + CK+I + Y F+ +++ R AA A+ ++
Sbjct: 7 KTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFYEHRHAAAALAAM 66
Query: 115 NGRHLFGQPIKVNWAYA-SGQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARV 173
NGR + G+ +KVNWA S Q++DTS HF++FVGDLSPE+T + A F+ + SDARV
Sbjct: 67 NGRKIMGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKAAFAPFGRISDARV 126
Query: 174 MWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSSDA 233
+ D TG+S+G+GFVSF N+ DA++AI + G+WLG RQIR NWAT+ + S+
Sbjct: 127 VKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAPKSTYESNT 186
Query: 234 KSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEE 293
K + S D E N +P N TVY G + +T+ + + F G I E
Sbjct: 187 KQL-------SYD--EVVNQSSPSN----CTVYCGGVTSGLTEQLMRQTFSPFGQ--IME 231
Query: 294 VRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSK 340
+RV DKG+ FVR+++H AA AI N T + G +KC WG +
Sbjct: 232 IRVFPDKGYSFVRFNSHESAAHAIVSVNGTT---IEGHVVKCYWGKE 275
>gi|189208127|ref|XP_001940397.1| nucleolysin TIA-1 isoform p40 [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187976490|gb|EDU43116.1| nucleolysin TIA-1 isoform p40 [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 470
Score = 205 bits (522), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 118/304 (38%), Positives = 166/304 (54%), Gaps = 33/304 (10%)
Query: 57 RSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS----------YGFIHYFDRRS 106
R++YVG + +VTE +L+++F +TG V+ K+I +S YGF+ Y D +
Sbjct: 83 RALYVGGLDPRVTEDVLRQIFETTGHVQSVKIIPDKTASSPSFNSKGFNYGFVEYDDPGA 142
Query: 107 AAMAILSLNGRHLFGQPIKVNWAYASGQREDTSGHFNIFVGDLSPEVTDATLFACFSVYP 166
A + +LNGR + EDTS HF+IFVGDLS EV D L FS +
Sbjct: 143 AERGMATLNGRRIH-------------NNEDTSNHFHIFVGDLSNEVNDEVLLQAFSTFG 189
Query: 167 SCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT-KGAGNN 225
S+ARVMWD KTGRSRG+GFV+FR++ DA A++ + G+WLGSR IRCNWA KG +
Sbjct: 190 PVSEARVMWDMKTGRSRGYGFVAFRDRADADRALSSMDGEWLGSRAIRCNWANQKGQPSI 249
Query: 226 EDKQSSDAKSVVELT----NGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHR 281
+Q+ + + T + G ++ + + TT YVGNL P +Q DL
Sbjct: 250 SQQQAMASMGMTPTTPFGHHHFPTHGVQSYDMVVAQTPAWQTTCYVGNLTPYTSQSDLVP 309
Query: 282 HFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSKP 341
F + G + E R Q D+GF F++ TH AA+AI N + G+ +KCSWG
Sbjct: 310 LFQNF--GYVTETRFQSDRGFAFIKMDTHENAAMAICQLNGYN---VNGRPLKCSWGKDR 364
Query: 342 TPPG 345
P G
Sbjct: 365 PPTG 368
>gi|432906488|ref|XP_004077556.1| PREDICTED: nucleolysin TIAR-like [Oryzias latipes]
Length = 382
Score = 205 bits (522), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 116/294 (39%), Positives = 178/294 (60%), Gaps = 21/294 (7%)
Query: 52 DPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRRSAAM 109
D S R++YVGN+ VTE L+ ++F+ GP + CK+I + S+ Y F+ +F+ R AA
Sbjct: 3 DESHPRTLYVGNLSRDVTEILILQLFTQIGPCKSCKMITEHTSNDPYCFVEFFEHRDAAA 62
Query: 110 AILSLNGRHLFGQPIKVNWAYA-SGQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSC 168
A+ ++NGR + G+ +KVNWA S Q++DTS HF++FVGDL+P+++ + A F+ +
Sbjct: 63 ALAAMNGRKILGKEVKVNWATTPSSQKKDTSNHFHVFVGDLNPDISTEDVRAAFTPFGKI 122
Query: 169 SDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDK 228
SDARV+ D TG+S+G+GFVSF N+ DA++AI + G+WLG RQIR NWAT+ +
Sbjct: 123 SDARVVKDLTTGKSKGYGFVSFYNKLDAENAIVHMAGQWLGGRQIRTNWATRKPPAPKSL 182
Query: 229 QSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGA 288
Q S +K + +E +P+N TVY G + E+++ + + F G
Sbjct: 183 QDSVSKQL---------RFEEVVTQSSPQN----CTVYCGGIQSELSEHLMRQTFSPFGQ 229
Query: 289 GVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSKPT 342
I E+RV +KG+ F+R+S+H AA AI N T + G +KC WG + T
Sbjct: 230 --IMEIRVFPEKGYSFIRFSSHDSAAHAIVSVNGTS---IEGHAVKCYWGKEST 278
>gi|37681959|gb|AAQ97857.1| TIA1 cytotoxic granule-associated RNA binding protein [Danio rerio]
gi|160773363|gb|AAI55270.1| Cytotoxic granule-associated RNA binding protein 1, like [Danio
rerio]
Length = 342
Score = 205 bits (521), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 123/307 (40%), Positives = 177/307 (57%), Gaps = 21/307 (6%)
Query: 51 FDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRRSAA 108
D R++YVGN+ VTE L+ +VFS GP + CK+I + Y F+ +++ R AA
Sbjct: 3 MDEDQPRTLYVGNLSRDVTEALILQVFSQIGPCKSCKMILDTTGNDPYCFVEFYENRHAA 62
Query: 109 MAILSLNGRHLFGQPIKVNWAYA-SGQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPS 167
A+ ++NGR + G+ +KVNWA S Q++DTS HF++FVGDLSPE++ + A F+ +
Sbjct: 63 AALAAMNGRKILGKDMKVNWASTPSSQKKDTSNHFHVFVGDLSPEISTDDVRAAFAPFGK 122
Query: 168 CSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNED 227
SDARV+ D TG+S+G+GF+SF N+ DA+SAI + G+WLG RQIR NWAT
Sbjct: 123 ISDARVVRDLATGKSKGYGFISFINKWDAESAIQQMNGQWLGGRQIRTNWAT-------- 174
Query: 228 KQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLG 287
++ S KS E + +E N +P N TVY G +A ++ + + F G
Sbjct: 175 RKPSAPKSNNEGASSKHLSYEEVLNQSSPSN----CTVYCGGIASGLSDQLMRQTFSPFG 230
Query: 288 AGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSKPTPPGTS 347
I E+RV +KG+ FVR+ +H AA AI N T + G +KC WG K T S
Sbjct: 231 Q--IMEIRVFPEKGYSFVRFDSHEGAAHAIVSVNGT---CIEGHTVKCYWG-KETADMRS 284
Query: 348 SNPLPPP 354
+P P
Sbjct: 285 MQQMPMP 291
>gi|41055734|ref|NP_956476.1| TIA1 cytotoxic granule-associated RNA binding protein 1 [Danio
rerio]
gi|28277744|gb|AAH45485.1| Cytotoxic granule-associated RNA binding protein 1, like [Danio
rerio]
gi|44890544|gb|AAH66734.1| Cytotoxic granule-associated RNA binding protein 1, like [Danio
rerio]
Length = 342
Score = 205 bits (521), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 123/307 (40%), Positives = 177/307 (57%), Gaps = 21/307 (6%)
Query: 51 FDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRRSAA 108
D R++YVGN+ VTE L+ +VFS GP + CK+I + Y F+ +++ R AA
Sbjct: 3 MDEDQPRTLYVGNLSRDVTEALILQVFSQIGPCKSCKMILDTTGNDPYCFVEFYENRHAA 62
Query: 109 MAILSLNGRHLFGQPIKVNWAYA-SGQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPS 167
A+ ++NGR + G+ +KVNWA S Q++DTS HF++FVGDLSPE++ + A F+ +
Sbjct: 63 AALAAMNGRKILGKDMKVNWASTPSSQKKDTSNHFHVFVGDLSPEISTDDVRAAFAPFGK 122
Query: 168 CSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNED 227
SDARV+ D TG+S+G+GF+SF N+ DA+SAI + G+WLG RQIR NWAT
Sbjct: 123 ISDARVVKDLATGKSKGYGFISFINKWDAESAIQQMNGQWLGGRQIRTNWAT-------- 174
Query: 228 KQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLG 287
++ S KS E + +E N +P N TVY G +A ++ + + F G
Sbjct: 175 RKPSAPKSNNEGASSKHLSYEEVLNQSSPSN----CTVYCGGIASGLSDQLMRQTFSPFG 230
Query: 288 AGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSKPTPPGTS 347
I E+RV +KG+ FVR+ +H AA AI N T + G +KC WG K T S
Sbjct: 231 Q--IMEIRVFPEKGYSFVRFDSHEGAAHAIVSVNGT---CIEGHTVKCYWG-KETADMRS 284
Query: 348 SNPLPPP 354
+P P
Sbjct: 285 MQQMPMP 291
>gi|417410125|gb|JAA51540.1| Putative apoptosis-promoting rna-binding protein tia-1/tiar rrm
superfamily, partial [Desmodus rotundus]
Length = 367
Score = 204 bits (519), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 116/284 (40%), Positives = 172/284 (60%), Gaps = 21/284 (7%)
Query: 60 YVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRRSAAMAILSLNGR 117
YVGN+ VTE L+ ++FS GP + CK+I + S+ Y F+ +++ R AA A+ ++NGR
Sbjct: 3 YVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSNDPYCFVEFYEHRDAAAALAAMNGR 62
Query: 118 HLFGQPIKVNWAYA-SGQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWD 176
+ G+ +KVNWA S Q++DTS HF++FVGDLSPE+T + + F+ + SDARV+ D
Sbjct: 63 KILGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKD 122
Query: 177 QKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSSDAKSV 236
TG+S+G+GFVSF N+ DA++AI + G+WLG RQIR NWAT+ + Q ++ K +
Sbjct: 123 MATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQENNTKQL 182
Query: 237 VELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRV 296
++ N +P+N TVY G +A +T + + F G I E+RV
Sbjct: 183 ---------RFEDVVNQSSPKN----CTVYCGGIASGLTDQLMRQTFSPFGQ--IMEIRV 227
Query: 297 QRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSK 340
+KG+ FVR+STH AA AI N T + G +KC WG +
Sbjct: 228 FPEKGYSFVRFSTHESAAHAIVSVNGTT---IEGHVVKCYWGKE 268
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/204 (21%), Positives = 86/204 (42%), Gaps = 29/204 (14%)
Query: 52 DPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRK----DKSSYGFIHYFDRRSA 107
D S V+VG++ ++T ++ F+ G + ++++ YGF+ ++++ A
Sbjct: 83 DTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDA 142
Query: 108 AMAILSLNGRHLFGQPIKVNWAY------ASGQREDTS-------------GHFNIFVGD 148
AI+ + G+ L G+ I+ NWA S Q +T + ++ G
Sbjct: 143 ENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYCGG 202
Query: 149 LSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWL 208
++ +TD + FS + + RV +G+ FV F + A AI + G +
Sbjct: 203 IASGLTDQLMRQTFSPFGQIMEIRVF------PEKGYSFVRFSTHESAAHAIVSVNGTTI 256
Query: 209 GSRQIRCNWATKGAGNNEDKQSSD 232
++C W + ++ Q D
Sbjct: 257 EGHVVKCYWGKESPDMTKNFQQVD 280
>gi|301759213|ref|XP_002915456.1| PREDICTED: nucleolysin TIAR-like [Ailuropoda melanoleuca]
Length = 477
Score = 204 bits (519), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 120/294 (40%), Positives = 177/294 (60%), Gaps = 22/294 (7%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRRSAAMAILSLN 115
S YVGN+ VTE L+ ++FS GP + CK+I + S+ Y F+ +++ R AA A+ ++N
Sbjct: 112 SGYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSNDPYCFVEFYEHRDAAAALAAMN 171
Query: 116 GRHLFGQPIKVNWAYA-SGQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVM 174
GR + G+ +KVNWA S Q++DTS HF++FVGDLSPE+T + + F+ + SDARV+
Sbjct: 172 GRKILGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVV 231
Query: 175 WDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSSDAK 234
D TG+S+G+GFVSF N+ DA++AI + G+WLG RQIR NWAT+ + Q ++ K
Sbjct: 232 KDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQENNTK 291
Query: 235 SVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEV 294
+ ++ N +P+N TVY G +A +T + + F G I E+
Sbjct: 292 QL---------RFEDVVNQSSPKN----CTVYCGGIASGLTDQLMRQTFSPFGQ--IMEI 336
Query: 295 RVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSKPTPPGTSS 348
RV +KG+ FVR+STH AA AI N T + G +KC WG K +P T +
Sbjct: 337 RVFPEKGYSFVRFSTHESAAHAIVSVNGTT---IEGHVVKCYWG-KESPDMTKN 386
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/204 (21%), Positives = 86/204 (42%), Gaps = 29/204 (14%)
Query: 52 DPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRK----DKSSYGFIHYFDRRSA 107
D S V+VG++ ++T ++ F+ G + ++++ YGF+ ++++ A
Sbjct: 194 DTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDA 253
Query: 108 AMAILSLNGRHLFGQPIKVNWAY------ASGQREDTS-------------GHFNIFVGD 148
AI+ + G+ L G+ I+ NWA S Q +T + ++ G
Sbjct: 254 ENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYCGG 313
Query: 149 LSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWL 208
++ +TD + FS + + RV +G+ FV F + A AI + G +
Sbjct: 314 IASGLTDQLMRQTFSPFGQIMEIRVF------PEKGYSFVRFSTHESAAHAIVSVNGTTI 367
Query: 209 GSRQIRCNWATKGAGNNEDKQSSD 232
++C W + ++ Q D
Sbjct: 368 EGHVVKCYWGKESPDMTKNFQQVD 391
>gi|296223620|ref|XP_002757701.1| PREDICTED: nucleolysin TIA-1 isoform p40 isoform 2 [Callithrix
jacchus]
gi|403260488|ref|XP_003922703.1| PREDICTED: nucleolysin TIA-1 isoform p40 isoform 2 [Saimiri
boliviensis boliviensis]
Length = 375
Score = 203 bits (517), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 117/287 (40%), Positives = 171/287 (59%), Gaps = 21/287 (7%)
Query: 57 RSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRRSAAMAILSL 114
+++YVGN+ VTE L+ ++FS GP + CK+I + Y F+ + + R AA A+ ++
Sbjct: 7 KTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFHEHRHAAAALAAM 66
Query: 115 NGRHLFGQPIKVNWAYA-SGQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARV 173
NGR + G+ +KVNWA S Q++DTS HF++FVGDLSPE+T + A F+ + SDARV
Sbjct: 67 NGRKIMGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKAAFAPFGRISDARV 126
Query: 174 MWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSSDA 233
+ D TG+S+G+GFVSF N+ DA++AI + G+WLG RQIR NWAT+ + S+
Sbjct: 127 VKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAPKSTYESNT 186
Query: 234 KSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEE 293
K + S D E N +P N TVY G + +T+ + + F G I E
Sbjct: 187 KQL-------SYD--EVVNQSSPSN----CTVYCGGVTSGLTEQLMRQTFSPFGQ--IME 231
Query: 294 VRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSK 340
+RV DKG+ FVR+++H AA AI N T + G +KC WG +
Sbjct: 232 IRVFPDKGYSFVRFNSHESAAHAIVSVNGTT---IEGHVVKCYWGKE 275
>gi|380816028|gb|AFE79888.1| nucleolysin TIA-1 isoform p40 isoform 1 [Macaca mulatta]
gi|383421175|gb|AFH33801.1| nucleolysin TIA-1 isoform p40 isoform 1 [Macaca mulatta]
Length = 375
Score = 203 bits (517), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 117/287 (40%), Positives = 171/287 (59%), Gaps = 21/287 (7%)
Query: 57 RSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRRSAAMAILSL 114
+++YVGN+ VTE L+ ++FS GP + CK+I + Y F+ + + R AA A+ ++
Sbjct: 7 KTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFHEHRHAAAALAAM 66
Query: 115 NGRHLFGQPIKVNWAYA-SGQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARV 173
NGR + G+ +KVNWA S Q++DTS HF++FVGDLSPE+T + A F+ + SDARV
Sbjct: 67 NGRKIMGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKAAFAPFGRISDARV 126
Query: 174 MWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSSDA 233
+ D TG+S+G+GFVSF N+ DA++AI + G+WLG RQIR NWAT+ + S+
Sbjct: 127 VKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAPKSTYESNT 186
Query: 234 KSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEE 293
K + S D E N +P N TVY G + +T+ + + F G I E
Sbjct: 187 KQL-------SYD--EVVNQSSPSN----CTVYCGGVTSGLTEQLMRQTFSPFGQ--IME 231
Query: 294 VRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSK 340
+RV DKG+ FVR+++H AA AI N T + G +KC WG +
Sbjct: 232 IRVFPDKGYSFVRFNSHESAAHAIVSVNGTT---IEGHVVKCYWGKE 275
>gi|348507121|ref|XP_003441105.1| PREDICTED: nucleolysin TIAR [Oreochromis niloticus]
Length = 382
Score = 203 bits (517), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 116/294 (39%), Positives = 178/294 (60%), Gaps = 25/294 (8%)
Query: 52 DPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRRSAAM 109
D + R++YVGN+ VTE L+ ++F+ GP + CK+I + S+ Y F+ +F+ R AA
Sbjct: 3 DETHPRTLYVGNLSRDVTEILILQLFTQIGPCKSCKMITEHTSNDPYCFVEFFEHRDAAA 62
Query: 110 AILSLNGRHLFGQPIKVNWAYA-SGQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSC 168
A+ ++NGR + G+ +KVNWA S Q++DTS HF++FVGDL+PE+T + F+ +
Sbjct: 63 ALAAMNGRKILGKEVKVNWATTPSSQKKDTSNHFHVFVGDLNPEITTEDVRVAFAPFGKI 122
Query: 169 SDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDK 228
SDARV+ D TG+S+G+GFVSF N+ DA++AI +++G+WLG RQIR NWAT+ +
Sbjct: 123 SDARVVKDMTTGKSKGYGFVSFYNKLDAENAIINMSGQWLGGRQIRTNWATRKPPAPKST 182
Query: 229 QSSDAKSVV--ELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSL 286
Q + +K + ++ N SS PQ TVY G + +++ + + F
Sbjct: 183 QDNGSKQLRFDDVVNQSS---------------PQNCTVYCGGIQSGLSEHLMRQTFSPF 227
Query: 287 GAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSK 340
G I EVRV +KG+ F+R+S+H AA AI N T + G +KC WG +
Sbjct: 228 GQ--IMEVRVFPEKGYSFIRFSSHDSAAHAIVSVNGT---VIEGHVVKCFWGKE 276
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 96/212 (45%), Gaps = 42/212 (19%)
Query: 144 IFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDL 203
++VG+LS +VT+ + F+ C +++ + + + FV F +DA +A+ +
Sbjct: 10 LYVGNLSRDVTEILILQLFTQIGPCKSCKMITEHTSNDP--YCFVEFFEHRDAAAALAAM 67
Query: 204 TGKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYT 263
G+ + ++++ NWAT S K+T+N +
Sbjct: 68 NGRKILGKEVKVNWATT----------------------PSSQKKDTSN---------HF 96
Query: 264 TVYVGNLAPEVTQLDLHRHFHSLG----AGVIEEVRVQRDKGFGFVRYSTHAEAALAIQM 319
V+VG+L PE+T D+ F G A V++++ + KG+GFV + +A AI
Sbjct: 97 HVFVGDLNPEITTEDVRVAFAPFGKISDARVVKDMTTGKSKGYGFVSFYNKLDAENAII- 155
Query: 320 GNTTQSSYLFGKQMKCSWGSK--PTPPGTSSN 349
+L G+Q++ +W ++ P P T N
Sbjct: 156 --NMSGQWLGGRQIRTNWATRKPPAPKSTQDN 185
Score = 45.4 bits (106), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 42/80 (52%), Gaps = 3/80 (3%)
Query: 53 PSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSSYGFIHYFDRRSAAMAIL 112
P C +VY G I + ++E L+++ FS G + ++ + Y FI + SAA AI+
Sbjct: 201 PQNC-TVYCGGIQSGLSEHLMRQTFSPFGQIMEVRVF--PEKGYSFIRFSSHDSAAHAIV 257
Query: 113 SLNGRHLFGQPIKVNWAYAS 132
S+NG + G +K W S
Sbjct: 258 SVNGTVIEGHVVKCFWGKES 277
>gi|148666754|gb|EDK99170.1| cytotoxic granule-associated RNA binding protein 1, isoform CRA_d
[Mus musculus]
Length = 385
Score = 203 bits (517), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 117/289 (40%), Positives = 173/289 (59%), Gaps = 23/289 (7%)
Query: 57 RSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS----YGFIHYFDRRSAAMAIL 112
+++YVGN+ VTE L+ ++FS GP + CK+I +++ Y F+ + + R AA A+
Sbjct: 15 KTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDVRTAGNDPYCFVEFHEHRHAAAALA 74
Query: 113 SLNGRHLFGQPIKVNWAYA-SGQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDA 171
++NGR + G+ +KVNWA S Q++DTS HF++FVGDLSPE+T + A F+ + SDA
Sbjct: 75 AMNGRKIMGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKAAFAPFGRISDA 134
Query: 172 RVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSS 231
RV+ D TG+S+G+GFVSF N+ DA++AI + G+WLG RQIR NWAT+ + S
Sbjct: 135 RVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAPKSTYES 194
Query: 232 DAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVI 291
+ K + S D E + +P N TVY G + +T+ + + F G I
Sbjct: 195 NTKQL-------SYD--EVVSQSSPNN----CTVYCGGVTSGLTEQLMRQTFSPFGQ--I 239
Query: 292 EEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSK 340
E+RV DKG+ FVR+S+H AA AI N T + G +KC WG +
Sbjct: 240 MEIRVFPDKGYSFVRFSSHESAAHAIVSVNGTT---IEGHVVKCYWGKE 285
>gi|255760009|ref|NP_001157550.1| nucleolysin TIA-1 isoform 2 [Mus musculus]
gi|28386187|gb|AAH46812.1| Tia1 protein [Mus musculus]
Length = 377
Score = 203 bits (517), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 117/289 (40%), Positives = 173/289 (59%), Gaps = 23/289 (7%)
Query: 57 RSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS----YGFIHYFDRRSAAMAIL 112
+++YVGN+ VTE L+ ++FS GP + CK+I +++ Y F+ + + R AA A+
Sbjct: 7 KTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDVRTAGNDPYCFVEFHEHRHAAAALA 66
Query: 113 SLNGRHLFGQPIKVNWAYA-SGQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDA 171
++NGR + G+ +KVNWA S Q++DTS HF++FVGDLSPE+T + A F+ + SDA
Sbjct: 67 AMNGRKIMGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKAAFAPFGRISDA 126
Query: 172 RVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSS 231
RV+ D TG+S+G+GFVSF N+ DA++AI + G+WLG RQIR NWAT+ + S
Sbjct: 127 RVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAPKSTYES 186
Query: 232 DAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVI 291
+ K + S D E + +P N TVY G + +T+ + + F G I
Sbjct: 187 NTKQL-------SYD--EVVSQSSPNN----CTVYCGGVTSGLTEQLMRQTFSPFGQ--I 231
Query: 292 EEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSK 340
E+RV DKG+ FVR+S+H AA AI N T + G +KC WG +
Sbjct: 232 MEIRVFPDKGYSFVRFSSHESAAHAIVSVNGTT---IEGHVVKCYWGKE 277
>gi|188219593|ref|NP_071320.2| nucleolysin TIA-1 isoform p40 isoform 1 [Homo sapiens]
gi|114577932|ref|XP_001141475.1| PREDICTED: uncharacterized protein LOC459303 isoform 1 [Pan
troglodytes]
gi|397521826|ref|XP_003830987.1| PREDICTED: nucleolysin TIA-1 isoform p40 isoform 2 [Pan paniscus]
gi|119620229|gb|EAW99823.1| TIA1 cytotoxic granule-associated RNA binding protein, isoform
CRA_a [Homo sapiens]
gi|410254976|gb|JAA15455.1| TIA1 cytotoxic granule-associated RNA binding protein [Pan
troglodytes]
gi|410298558|gb|JAA27879.1| TIA1 cytotoxic granule-associated RNA binding protein [Pan
troglodytes]
gi|410353837|gb|JAA43522.1| TIA1 cytotoxic granule-associated RNA binding protein [Pan
troglodytes]
Length = 375
Score = 203 bits (517), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 117/287 (40%), Positives = 171/287 (59%), Gaps = 21/287 (7%)
Query: 57 RSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRRSAAMAILSL 114
+++YVGN+ VTE L+ ++FS GP + CK+I + Y F+ + + R AA A+ ++
Sbjct: 7 KTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFHEHRHAAAALAAM 66
Query: 115 NGRHLFGQPIKVNWAYA-SGQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARV 173
NGR + G+ +KVNWA S Q++DTS HF++FVGDLSPE+T + A F+ + SDARV
Sbjct: 67 NGRKIMGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKAAFAPFGRISDARV 126
Query: 174 MWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSSDA 233
+ D TG+S+G+GFVSF N+ DA++AI + G+WLG RQIR NWAT+ + S+
Sbjct: 127 VKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAPKSTYESNT 186
Query: 234 KSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEE 293
K + S D E N +P N TVY G + +T+ + + F G I E
Sbjct: 187 KQL-------SYD--EVVNQSSPSN----CTVYCGGVTSGLTEQLMRQTFSPFGQ--IME 231
Query: 294 VRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSK 340
+RV DKG+ FVR+++H AA AI N T + G +KC WG +
Sbjct: 232 IRVFPDKGYSFVRFNSHESAAHAIVSVNGTT---IEGHVVKCYWGKE 275
>gi|449534217|ref|XP_004174062.1| PREDICTED: nucleolysin TIAR-like, partial [Cucumis sativus]
Length = 110
Score = 203 bits (517), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 91/101 (90%), Positives = 99/101 (98%)
Query: 94 SSYGFIHYFDRRSAAMAILSLNGRHLFGQPIKVNWAYASGQREDTSGHFNIFVGDLSPEV 153
SSYGF+ YFDRRSAA++I+SLNGR+LFGQPIKVNWAYAS QREDTSGHFNIFVGDLSPEV
Sbjct: 1 SSYGFVDYFDRRSAAVSIISLNGRNLFGQPIKVNWAYASSQREDTSGHFNIFVGDLSPEV 60
Query: 154 TDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQ 194
TDATLFACFSVYPSCSDARVMWDQKTGRSRG+GFV+FRN+Q
Sbjct: 61 TDATLFACFSVYPSCSDARVMWDQKTGRSRGYGFVAFRNEQ 101
>gi|308321266|gb|ADO27785.1| nucleolysin tiar [Ictalurus furcatus]
Length = 374
Score = 203 bits (516), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 114/292 (39%), Positives = 176/292 (60%), Gaps = 21/292 (7%)
Query: 52 DPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRRSAAM 109
D S +++YVGN+ VTE L+ ++F+ GP + CK+I + S+ Y F+ +++ R AA
Sbjct: 3 DESHPKTLYVGNLSRDVTENLILQLFTQIGPCKSCKMITEHTSNDPYCFVEFYEHRDAAA 62
Query: 110 AILSLNGRHLFGQPIKVNWAYA-SGQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSC 168
A+ ++NGR + G+ +KVNWA S Q++DTS HF++FVGDLSPE+T + A F+ +
Sbjct: 63 ALAAMNGRKILGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTDDIRAAFAPFGKI 122
Query: 169 SDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDK 228
SDARV+ D TG+S+G+GFVSF N+ DA++AI + G+WLG RQIR NWAT+ ++
Sbjct: 123 SDARVVKDMTTGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPAPKNT 182
Query: 229 QSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGA 288
Q + K + ++ N +P+N TVY G + ++ + + F G
Sbjct: 183 QDASPKQLRY---------EDVVNQSSPQN----CTVYCGGIQSGLSDHLMRQTFSPFGQ 229
Query: 289 GVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSK 340
I E+RV +KG+ F+R+S+H AA AI N T + G +KC WG +
Sbjct: 230 --IMEIRVFPEKGYSFIRFSSHESAAHAIVSVNGTT---IEGHIVKCYWGKE 276
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 103/223 (46%), Gaps = 43/223 (19%)
Query: 136 EDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQD 195
ED S ++VG+LS +VT+ + F+ C +++ + + + FV F +D
Sbjct: 2 EDESHPKTLYVGNLSRDVTENLILQLFTQIGPCKSCKMITEHTSNDP--YCFVEFYEHRD 59
Query: 196 AQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEA 255
A +A+ + G+ + ++++ NWAT S K+T+N
Sbjct: 60 AAAALAAMNGRKILGKEVKVNWATT----------------------PSSQKKDTSN--- 94
Query: 256 PENNPQYTTVYVGNLAPEVTQLDLHRHFHSLG----AGVIEEVRVQRDKGFGFVRYSTHA 311
+ V+VG+L+PE+T D+ F G A V++++ + KG+GFV +
Sbjct: 95 ------HFHVFVGDLSPEITTDDIRAAFAPFGKISDARVVKDMTTGKSKGYGFVSFYNKL 148
Query: 312 EAALAI-QMGNTTQSSYLFGKQMKCSWGS-KPTPPGTSSNPLP 352
+A AI MG +L G+Q++ +W + KP P + + P
Sbjct: 149 DAENAIVHMG----GQWLGGRQIRTNWATRKPPAPKNTQDASP 187
>gi|148666756|gb|EDK99172.1| cytotoxic granule-associated RNA binding protein 1, isoform CRA_f
[Mus musculus]
Length = 375
Score = 203 bits (516), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 117/287 (40%), Positives = 171/287 (59%), Gaps = 21/287 (7%)
Query: 57 RSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRRSAAMAILSL 114
+++YVGN+ VTE L+ ++FS GP + CK+I + Y F+ + + R AA A+ ++
Sbjct: 7 KTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFHEHRHAAAALAAM 66
Query: 115 NGRHLFGQPIKVNWAYA-SGQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARV 173
NGR + G+ +KVNWA S Q++DTS HF++FVGDLSPE+T + A F+ + SDARV
Sbjct: 67 NGRKIMGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKAAFAPFGRISDARV 126
Query: 174 MWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSSDA 233
+ D TG+S+G+GFVSF N+ DA++AI + G+WLG RQIR NWAT+ + S+
Sbjct: 127 VKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAPKSTYESNT 186
Query: 234 KSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEE 293
K + S D E + +P N TVY G + +T+ + + F G I E
Sbjct: 187 KQL-------SYD--EVVSQSSPNN----CTVYCGGVTSGLTEQLMRQTFSPFGQ--IME 231
Query: 294 VRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSK 340
+RV DKG+ FVR+S+H AA AI N T + G +KC WG +
Sbjct: 232 IRVFPDKGYSFVRFSSHESAAHAIVSVNGTT---IEGHVVKCYWGKE 275
>gi|410900504|ref|XP_003963736.1| PREDICTED: nucleolysin TIAR-like isoform 1 [Takifugu rubripes]
Length = 386
Score = 203 bits (516), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 113/292 (38%), Positives = 172/292 (58%), Gaps = 21/292 (7%)
Query: 52 DPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRRSAAM 109
+ S +++YVGN+ VTE L+ ++FS GP + CK+I SS Y F+ + D + AA
Sbjct: 5 EESLSKTLYVGNLSRDVTEILILQLFSQIGPCKSCKMITDHTSSDPYCFVEFVDHKDAAS 64
Query: 110 AILSLNGRHLFGQPIKVNWAYA-SGQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSC 168
A ++N R + G+ +KVNWA + S Q++DTS HF++FVGDLSP++T + A F+ +
Sbjct: 65 ARATMNKRKILGKEVKVNWATSPSCQKKDTSNHFHVFVGDLSPDITTEDIRAAFAPFGHI 124
Query: 169 SDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDK 228
SDARV+ D TG+S+G+GFVSF N+ DA++AI+ + G+WL RQIR NWAT+ +
Sbjct: 125 SDARVLKDMATGKSKGYGFVSFYNKLDAENAISKMAGQWLQGRQIRTNWATRKPPAPKSF 184
Query: 229 QSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGA 288
Q + +K + + +++P TVY G + +T+ + + F G
Sbjct: 185 QDNGSKHL-------------KFDDIVTQSSPHNCTVYCGGIQSGLTEHLMQQTFSPFGQ 231
Query: 289 GVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSK 340
I E+RV DKG+ FVR+S+H AA AI N T + G +KC WG +
Sbjct: 232 --IMEIRVFPDKGYSFVRFSSHDSAAHAIVSVNGT---VIEGNLVKCFWGKE 278
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 43/80 (53%), Gaps = 3/80 (3%)
Query: 53 PSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSSYGFIHYFDRRSAAMAIL 112
P C +VY G I + +TE L+Q+ FS G + ++ DK Y F+ + SAA AI+
Sbjct: 203 PHNC-TVYCGGIQSGLTEHLMQQTFSPFGQIMEIRVF-PDKG-YSFVRFSSHDSAAHAIV 259
Query: 113 SLNGRHLFGQPIKVNWAYAS 132
S+NG + G +K W S
Sbjct: 260 SVNGTVIEGNLVKCFWGKES 279
>gi|410900508|ref|XP_003963738.1| PREDICTED: nucleolysin TIAR-like isoform 3 [Takifugu rubripes]
Length = 395
Score = 202 bits (515), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 113/292 (38%), Positives = 172/292 (58%), Gaps = 21/292 (7%)
Query: 52 DPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRRSAAM 109
+ S +++YVGN+ VTE L+ ++FS GP + CK+I SS Y F+ + D + AA
Sbjct: 3 EESLSKTLYVGNLSRDVTEILILQLFSQIGPCKSCKMITDHTSSDPYCFVEFVDHKDAAS 62
Query: 110 AILSLNGRHLFGQPIKVNWAYA-SGQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSC 168
A ++N R + G+ +KVNWA + S Q++DTS HF++FVGDLSP++T + A F+ +
Sbjct: 63 ARATMNKRKILGKEVKVNWATSPSCQKKDTSNHFHVFVGDLSPDITTEDIRAAFAPFGHI 122
Query: 169 SDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDK 228
SDARV+ D TG+S+G+GFVSF N+ DA++AI+ + G+WL RQIR NWAT+ +
Sbjct: 123 SDARVLKDMATGKSKGYGFVSFYNKLDAENAISKMAGQWLQGRQIRTNWATRKPPAPKSF 182
Query: 229 QSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGA 288
Q + +K + + +++P TVY G + +T+ + + F G
Sbjct: 183 QDNGSKHL-------------KFDDIVTQSSPHNCTVYCGGIQSGLTEHLMQQTFSPFGQ 229
Query: 289 GVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSK 340
I E+RV DKG+ FVR+S+H AA AI N T + G +KC WG +
Sbjct: 230 --IMEIRVFPDKGYSFVRFSSHDSAAHAIVSVNGT---VIEGNLVKCFWGKE 276
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 43/80 (53%), Gaps = 3/80 (3%)
Query: 53 PSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSSYGFIHYFDRRSAAMAIL 112
P C +VY G I + +TE L+Q+ FS G + ++ DK Y F+ + SAA AI+
Sbjct: 201 PHNC-TVYCGGIQSGLTEHLMQQTFSPFGQIMEIRVF-PDKG-YSFVRFSSHDSAAHAIV 257
Query: 113 SLNGRHLFGQPIKVNWAYAS 132
S+NG + G +K W S
Sbjct: 258 SVNGTVIEGNLVKCFWGKES 277
>gi|449267712|gb|EMC78625.1| Nucleolysin TIA-1 isoform p40, partial [Columba livia]
Length = 361
Score = 202 bits (515), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 120/287 (41%), Positives = 169/287 (58%), Gaps = 22/287 (7%)
Query: 60 YVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRRSAAMAILSLNGR 117
YVGN+ VTE L+ ++FS GP + CK+I + Y F+ +++ R AA A+ ++NGR
Sbjct: 1 YVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFYEHRHAAAALAAMNGR 60
Query: 118 HLFGQPIKVNWAYA-SGQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWD 176
+ G+ +KVNWA S Q++DTS HF++FVGDLSPE+T + A F+ + SDARV+ D
Sbjct: 61 KIMGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKD 120
Query: 177 QKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSSDAKSV 236
TG+S+G+GFVSF N+ DA++AI + G+WLG RQIR NWAT ++ KS
Sbjct: 121 MATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWAT--------RKPPAPKST 172
Query: 237 VELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRV 296
E N E N +P N TVY G + +T+ + + F G I E+RV
Sbjct: 173 YE-ANTKQLSYDEVVNQSSPSN----CTVYCGGVTSGLTEQLMRQTFSPFGQ--IMEIRV 225
Query: 297 QRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSKPTP 343
DKG+ FVR+++H AA AI N T + G +KC WG K TP
Sbjct: 226 FPDKGYSFVRFNSHESAAHAIVSVNGTT---IEGHIVKCYWG-KETP 268
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 3/77 (3%)
Query: 53 PSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSSYGFIHYFDRRSAAMAIL 112
PS C +VY G + + +TE L+++ FS G + ++ DK Y F+ + SAA AI+
Sbjct: 191 PSNC-TVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVF-PDK-GYSFVRFNSHESAAHAIV 247
Query: 113 SLNGRHLFGQPIKVNWA 129
S+NG + G +K W
Sbjct: 248 SVNGTTIEGHIVKCYWG 264
>gi|291231285|ref|XP_002735593.1| PREDICTED: TIA-1 related protein-like [Saccoglossus kowalevskii]
Length = 409
Score = 202 bits (514), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 114/302 (37%), Positives = 171/302 (56%), Gaps = 23/302 (7%)
Query: 52 DPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKD--KSSYGFIHYFDRRSAAM 109
D + R++YVGN+ QVTE + ++F GP + CK+I + Y F+ + + AA
Sbjct: 9 DDALPRTLYVGNLDRQVTEAFILQLFGQIGPCKSCKMIAEHGGNDPYCFVEFVEHSHAAA 68
Query: 110 AILSLNGRHLFGQPIKVNWAYA-SGQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSC 168
A+ ++NGR + G+ +KVNWA S ++DTS H ++FVGDLS EV L A F+ +
Sbjct: 69 ALQTMNGRMILGKEVKVNWATTPSSMKKDTSNHHHVFVGDLSSEVDTPDLKAAFAPFGQI 128
Query: 169 SDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDK 228
SDARV+ D +T +S+G+GFVSF N+ DA++AI + G+WL R IR NWAT+
Sbjct: 129 SDARVVKDLQTNKSKGYGFVSFLNKVDAENAIQGMNGQWLSGRAIRTNWATRKPPPPRQP 188
Query: 229 QSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGA 288
+++ S ++ N SS TN TTVY+G + +T+ + F G
Sbjct: 189 ETTKQLSYDDVCNSSS-----YTN----------TTVYIGGVTTGLTEGKMRETFSHYGH 233
Query: 289 GVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSKPTPPGTSS 348
I+EVR+ DKG+ F+R+ TH AA AI N +Q + G +KCSWG + + P +
Sbjct: 234 --IQEVRIFPDKGYAFIRFMTHESAAHAIVSVNGSQ---INGHMVKCSWGKESSDPLYQA 288
Query: 349 NP 350
P
Sbjct: 289 QP 290
>gi|291386623|ref|XP_002709696.1| PREDICTED: TIA1 cytotoxic granule-associated RNA binding
protein-like [Oryctolagus cuniculus]
Length = 386
Score = 202 bits (513), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 120/294 (40%), Positives = 172/294 (58%), Gaps = 23/294 (7%)
Query: 52 DPSTC--RSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRRSA 107
D TC + YVGN+ VTE L+ ++FS GP + CK+I + Y F+ + + R A
Sbjct: 11 DVHTCVRNAGYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFHEHRHA 70
Query: 108 AMAILSLNGRHLFGQPIKVNWAYA-SGQREDTSGHFNIFVGDLSPEVTDATLFACFSVYP 166
A A+ ++NGR + G+ +KVNWA S Q++DTS HF++FVGDLSPE+T + A F+ +
Sbjct: 71 AAALAAMNGRKIMGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKAAFAPFG 130
Query: 167 SCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNE 226
SDARV+ D TG+S+G+GFVSF N+ DA++AI + G+WLG RQIR NWAT+ +
Sbjct: 131 RISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAPK 190
Query: 227 DKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSL 286
S+ K + S D E N +P N TVY G + +T+ + + F
Sbjct: 191 STYESNTKQL-------SYD--EVVNQSSPSN----CTVYCGGVTSGLTEQLMRQTFSPF 237
Query: 287 GAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSK 340
G I E+RV DKG+ FVR+++H AA AI N T + G +KC WG +
Sbjct: 238 GQ--IMEIRVFPDKGYSFVRFNSHESAAHAIVSVNGTT---IEGHVVKCYWGKE 286
>gi|6678349|ref|NP_033409.1| nucleolysin TIAR [Mus musculus]
gi|61557246|ref|NP_001013211.1| nucleolysin TIAR [Rattus norvegicus]
gi|2500589|sp|P70318.1|TIAR_MOUSE RecName: Full=Nucleolysin TIAR; AltName: Full=TIA-1-related protein
gi|1592563|gb|AAC52870.1| RNA binding protein TIAR [Mus musculus]
gi|12848609|dbj|BAB28019.1| unnamed protein product [Mus musculus]
gi|60552455|gb|AAH91409.1| Tia1 cytotoxic granule-associated RNA binding protein-like 1
[Rattus norvegicus]
gi|148685702|gb|EDL17649.1| Tial1 cytotoxic granule-associated RNA binding protein-like 1,
isoform CRA_c [Mus musculus]
gi|149067621|gb|EDM17173.1| Tial1 cytotoxic granule-associated RNA binding protein-like 1
(mapped), isoform CRA_a [Rattus norvegicus]
Length = 392
Score = 202 bits (513), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 119/304 (39%), Positives = 176/304 (57%), Gaps = 38/304 (12%)
Query: 57 RSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLI------RKDKSS-------------YG 97
R++YVGN+ VTE L+ ++FS GP + CK+I R+ SS Y
Sbjct: 9 RTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEQPDSRRVNSSVGFSVLQHTSNDPYC 68
Query: 98 FIHYFDRRSAAMAILSLNGRHLFGQPIKVNWAYA-SGQREDTSGHFNIFVGDLSPEVTDA 156
F+ +++ R AA A+ ++NGR + G+ +KVNWA S Q++DTS HF++FVGDLSPE+T
Sbjct: 69 FVEFYEHRDAAAALAAMNGRKILGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTE 128
Query: 157 TLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCN 216
+ + F+ + SDARV+ D TG+S+G+GFVSF N+ DA++AI + G+WLG RQIR N
Sbjct: 129 DIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTN 188
Query: 217 WATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQ 276
WAT+ + Q ++ K + ++ N +P+N TVY G +A +T
Sbjct: 189 WATRKPPAPKSTQETNTKQL---------RFEDVVNQSSPKN----CTVYCGGIASGLTD 235
Query: 277 LDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCS 336
+ + F G I E+RV +KG+ FVR+STH AA AI N T + G +KC
Sbjct: 236 QLMRQTFSPFGQ--IMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTT---IEGHVVKCY 290
Query: 337 WGSK 340
WG +
Sbjct: 291 WGKE 294
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 101/228 (44%), Gaps = 55/228 (24%)
Query: 136 EDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGR----SRGFG----- 186
ED ++VG+LS +VT+ + FS C +++ +Q R S GF
Sbjct: 3 EDDGQPRTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEQPDSRRVNSSVGFSVLQHT 62
Query: 187 ------FVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELT 240
FV F +DA +A+ + G+ + ++++ NWAT
Sbjct: 63 SNDPYCFVEFYEHRDAAAALAAMNGRKILGKEVKVNWATT-------------------- 102
Query: 241 NGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLG----AGVIEEVRV 296
S K+T+N + V+VG+L+PE+T D+ F G A V++++
Sbjct: 103 --PSSQKKDTSN---------HFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMAT 151
Query: 297 QRDKGFGFVRYSTHAEAALAI-QMGNTTQSSYLFGKQMKCSWGSKPTP 343
+ KG+GFV + +A AI MG +L G+Q++ +W ++ P
Sbjct: 152 GKSKGYGFVSFYNKLDAENAIVHMG----GQWLGGRQIRTNWATRKPP 195
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/204 (21%), Positives = 86/204 (42%), Gaps = 29/204 (14%)
Query: 52 DPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRK----DKSSYGFIHYFDRRSA 107
D S V+VG++ ++T ++ F+ G + ++++ YGF+ ++++ A
Sbjct: 109 DTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDA 168
Query: 108 AMAILSLNGRHLFGQPIKVNWAY------ASGQREDTS-------------GHFNIFVGD 148
AI+ + G+ L G+ I+ NWA S Q +T + ++ G
Sbjct: 169 ENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQETNTKQLRFEDVVNQSSPKNCTVYCGG 228
Query: 149 LSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWL 208
++ +TD + FS + + RV +G+ FV F + A AI + G +
Sbjct: 229 IASGLTDQLMRQTFSPFGQIMEIRVF------PEKGYSFVRFSTHESAAHAIVSVNGTTI 282
Query: 209 GSRQIRCNWATKGAGNNEDKQSSD 232
++C W + ++ Q D
Sbjct: 283 EGHVVKCYWGKESPDMTKNFQQVD 306
>gi|116191711|ref|XP_001221668.1| hypothetical protein CHGG_05573 [Chaetomium globosum CBS 148.51]
gi|88181486|gb|EAQ88954.1| hypothetical protein CHGG_05573 [Chaetomium globosum CBS 148.51]
Length = 413
Score = 202 bits (513), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 120/288 (41%), Positives = 155/288 (53%), Gaps = 24/288 (8%)
Query: 69 TEPLLQEVFSSTGPVEGCKLIRKDKSSYGFIHYFDRRSAAMAILSLNGRHLFGQPIKVNW 128
T P +E P G L +YGF+ Y D +A A+ +LNGR + I+VNW
Sbjct: 44 TSPYSRENTQIRFPDRGSLLRWAKGYNYGFVEYDDPGAAERAMQTLNGRRVHQSEIRVNW 103
Query: 129 AYASG--QREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFG 186
AY S +EDTS HF+IFVGDLS EV D L FS + S S+ARVMWD KTGRSRG+G
Sbjct: 104 AYQSNSTNKEDTSNHFHIFVGDLSNEVNDEVLLQAFSAFGSVSEARVMWDMKTGRSRGYG 163
Query: 187 FVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSS-- 244
FV+FR + DA+ A++ + G+WLGSR IRCNWA N+ Q S A+ G +
Sbjct: 164 FVAFRERPDAEKALSSMDGEWLGSRAIRCNWA------NQKGQPSMAQQQAMQQMGMTPT 217
Query: 245 ---------EDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVR 295
G + + + TT YVGNL P TQ D+ F + G + E R
Sbjct: 218 TPYGHHHFPTHGVHSYDMIVNQTPAWQTTCYVGNLTPYTTQQDIVPLFQNF--GFVVESR 275
Query: 296 VQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSKPTP 343
Q D+GF FV+ TH AA+AI N + G+ +KCSWG TP
Sbjct: 276 FQADRGFSFVKMDTHENAAMAICQLNGYN---VNGRPLKCSWGKDKTP 320
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 84/208 (40%), Gaps = 47/208 (22%)
Query: 52 DPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKS----SYGFIHYFDRRSA 107
D S ++VG++ +V + +L + FS+ G V +++ K+ YGF+ + +R A
Sbjct: 114 DTSNHFHIFVGDLSNEVNDEVLLQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRERPDA 173
Query: 108 AMAILSLNGRHLFGQPIKVNWAYASGQREDTS---------------GHFNI-------- 144
A+ S++G L + I+ NWA GQ GH +
Sbjct: 174 EKALSSMDGEWLGSRAIRCNWANQKGQPSMAQQQAMQQMGMTPTTPYGHHHFPTHGVHSY 233
Query: 145 --------------FVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSF 190
+VG+L+P T + F + ++R D RGF FV
Sbjct: 234 DMIVNQTPAWQTTCYVGNLTPYTTQQDIVPLFQNFGFVVESRFQAD------RGFSFVKM 287
Query: 191 RNQQDAQSAINDLTGKWLGSRQIRCNWA 218
++A AI L G + R ++C+W
Sbjct: 288 DTHENAAMAICQLNGYNVNGRPLKCSWG 315
>gi|58865762|ref|NP_001012096.1| TIA1 cytotoxic granule-associated RNA binding protein [Rattus
norvegicus]
gi|56268852|gb|AAH87064.1| TIA1 cytotoxic granule-associated RNA binding protein [Rattus
norvegicus]
gi|149036619|gb|EDL91237.1| rCG56007, isoform CRA_c [Rattus norvegicus]
Length = 375
Score = 201 bits (512), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 116/287 (40%), Positives = 171/287 (59%), Gaps = 21/287 (7%)
Query: 57 RSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRRSAAMAILSL 114
+++YVGN+ VTE L+ ++FS GP + CK+I + Y F+ + + R AA A+ ++
Sbjct: 7 KTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFHEHRHAAAALAAM 66
Query: 115 NGRHLFGQPIKVNWAYA-SGQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARV 173
NGR + G+ +KVNWA S Q++DTS HF++FVGDLSPE+T + A F+ + SDARV
Sbjct: 67 NGRKIMGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKAAFAPFGRISDARV 126
Query: 174 MWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSSDA 233
+ D TG+S+G+GFVSF N+ DA++AI + G+WLG RQIR NWAT+ + S+
Sbjct: 127 VKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAPKSTYESNT 186
Query: 234 KSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEE 293
K + S D E + +P N TVY G + +T+ + + F G I E
Sbjct: 187 KQL-------SYD--EVVSQSSPGN----CTVYCGGVTSGLTEQLMRQTFSPFGQ--IME 231
Query: 294 VRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSK 340
+RV DKG+ F+R+S+H AA AI N T + G +KC WG +
Sbjct: 232 IRVFPDKGYSFIRFSSHESAAHAIVSVNGTT---IEGHVVKCYWGKE 275
>gi|410929559|ref|XP_003978167.1| PREDICTED: nucleolysin TIA-1 isoform p40-like [Takifugu rubripes]
Length = 385
Score = 201 bits (512), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 115/289 (39%), Positives = 166/289 (57%), Gaps = 21/289 (7%)
Query: 57 RSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRRSAAMAILSL 114
+++YVGN+ VTE L+ E+F GP + CK+I Y F+ +++ R A I ++
Sbjct: 7 KTLYVGNLSRDVTEALILELFGQIGPCKSCKMIVDTAGHDPYCFVEFYEHRHATATIAAM 66
Query: 115 NGRHLFGQPIKVNWAYA-SGQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARV 173
NGR + G+ +KVNWA + Q++DTS HF++FVGDLSPE+T + A F + SD RV
Sbjct: 67 NGRKILGKEVKVNWATTPTSQKKDTSSHFHVFVGDLSPEITTDDIKAAFGPFGKISDCRV 126
Query: 174 MWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSSDA 233
+ D TG+S+G+GFVSF N+ DA++AI + G+WLG RQIR NWAT+ K +
Sbjct: 127 VKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATR-------KPAPKT 179
Query: 234 KSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEE 293
+ T S D E N +P N TVY G + +T+ + + F G I E
Sbjct: 180 TNETTNTKQLSFD--EVVNQSSPSN----CTVYCGGVTTGLTEQIMRQTFSPFGH--IME 231
Query: 294 VRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSKPT 342
+RV DKG+ FVR+++H AA AI N T + G +KC WG + T
Sbjct: 232 IRVFPDKGYSFVRFNSHEAAAHAIVSVNGTT---IEGYVVKCYWGKETT 277
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 93/208 (44%), Gaps = 47/208 (22%)
Query: 144 IFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDL 203
++VG+LS +VT+A + F C +++ D T + FV F + A + I +
Sbjct: 9 LYVGNLSRDVTEALILELFGQIGPCKSCKMIVD--TAGHDPYCFVEFYEHRHATATIAAM 66
Query: 204 TGKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYT 263
G+ + ++++ NWAT T T ++ +
Sbjct: 67 NGRKILGKEVKVNWAT-------------------------------TPTSQKKDTSSHF 95
Query: 264 TVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRD------KGFGFVRYSTHAEAALAI 317
V+VG+L+PE+T D+ F G I + RV +D KG+GFV + +A AI
Sbjct: 96 HVFVGDLSPEITTDDIKAAFGPFGK--ISDCRVVKDMATGKSKGYGFVSFFNKWDAENAI 153
Query: 318 Q-MGNTTQSSYLFGKQMKCSWGS-KPTP 343
Q MG +L G+Q++ +W + KP P
Sbjct: 154 QQMG----GQWLGGRQIRTNWATRKPAP 177
>gi|126273033|ref|XP_001367857.1| PREDICTED: nucleolysin TIAR isoform 1 [Monodelphis domestica]
Length = 388
Score = 201 bits (512), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 119/304 (39%), Positives = 175/304 (57%), Gaps = 38/304 (12%)
Query: 57 RSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLI------RKDKSS-------------YG 97
R++YVGN+ VTE L+ ++FS GP + CK+I R+ SS Y
Sbjct: 8 RTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEQPDSRRVNSSVGFSVLQHTSNDPYC 67
Query: 98 FIHYFDRRSAAMAILSLNGRHLFGQPIKVNWAYA-SGQREDTSGHFNIFVGDLSPEVTDA 156
F+ +++ R AA A+ ++NGR + G+ +KVNWA S Q++DTS HF++FVGDLSPE+T
Sbjct: 68 FVEFYEHRDAAAALAAMNGRKILGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTE 127
Query: 157 TLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCN 216
+ + F+ + SDARV+ D TG+S+G+GFVSF N+ DA++AI + G+WLG RQIR N
Sbjct: 128 DIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTN 187
Query: 217 WATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQ 276
WAT+ + Q + K + ++ N +P+N TVY G +A +T
Sbjct: 188 WATRKPPAPKSTQENSTKQL---------RFEDVVNQSSPKN----CTVYCGGIASGLTD 234
Query: 277 LDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCS 336
+ + F G I E+RV +KG+ FVR+STH AA AI N T + G +KC
Sbjct: 235 QLMRQTFSPFGQ--IMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTT---IEGHVVKCY 289
Query: 337 WGSK 340
WG +
Sbjct: 290 WGKE 293
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 104/236 (44%), Gaps = 57/236 (24%)
Query: 136 EDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGR----SRGFG----- 186
ED ++VG+LS +VT+ + FS C +++ +Q R S GF
Sbjct: 2 EDDGQPRTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEQPDSRRVNSSVGFSVLQHT 61
Query: 187 ------FVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELT 240
FV F +DA +A+ + G+ + ++++ NWAT
Sbjct: 62 SNDPYCFVEFYEHRDAAAALAAMNGRKILGKEVKVNWATT-------------------- 101
Query: 241 NGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLG----AGVIEEVRV 296
S K+T+N + V+VG+L+PE+T D+ F G A V++++
Sbjct: 102 --PSSQKKDTSN---------HFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMAT 150
Query: 297 QRDKGFGFVRYSTHAEAALAI-QMGNTTQSSYLFGKQMKCSWGSK--PTPPGTSSN 349
+ KG+GFV + +A AI MG +L G+Q++ +W ++ P P T N
Sbjct: 151 GKSKGYGFVSFYNKLDAENAIVHMG----GQWLGGRQIRTNWATRKPPAPKSTQEN 202
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/204 (19%), Positives = 85/204 (41%), Gaps = 29/204 (14%)
Query: 52 DPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRK----DKSSYGFIHYFDRRSA 107
D S V+VG++ ++T ++ F+ G + ++++ YGF+ ++++ A
Sbjct: 108 DTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDA 167
Query: 108 AMAILSLNGRHLFGQPIKVNWA-------------------YASGQREDTSGHFNIFVGD 148
AI+ + G+ L G+ I+ NWA + + + + ++ G
Sbjct: 168 ENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQENSTKQLRFEDVVNQSSPKNCTVYCGG 227
Query: 149 LSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWL 208
++ +TD + FS + + RV +G+ FV F + A AI + G +
Sbjct: 228 IASGLTDQLMRQTFSPFGQIMEIRVF------PEKGYSFVRFSTHESAAHAIVSVNGTTI 281
Query: 209 GSRQIRCNWATKGAGNNEDKQSSD 232
++C W + ++ Q D
Sbjct: 282 EGHVVKCYWGKESPDMTKNFQQVD 305
>gi|45383446|ref|NP_989687.1| nucleolysin TIAR isoform 1 [Gallus gallus]
gi|28883275|gb|AAO49721.1| TIAR [Gallus gallus]
Length = 388
Score = 201 bits (511), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 117/304 (38%), Positives = 174/304 (57%), Gaps = 38/304 (12%)
Query: 57 RSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS-------------------YG 97
R++YVGN+ VTE L+ ++FS GP + CK+I + S Y
Sbjct: 8 RTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEQPDSSRRVNSVGFSVLQHTSNDPYC 67
Query: 98 FIHYFDRRSAAMAILSLNGRHLFGQPIKVNWAYA-SGQREDTSGHFNIFVGDLSPEVTDA 156
F+ +++ R AA A+ ++NGR + G+ +KVNWA S Q++DTS HF++FVGDLSPE+T
Sbjct: 68 FVEFYEHRDAAAALAAMNGRKILGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTE 127
Query: 157 TLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCN 216
+ + F+ + SDARV+ D TG+S+G+GFVSF N+ DA++AI + G+WLG RQIR N
Sbjct: 128 DIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTN 187
Query: 217 WATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQ 276
WAT+ + Q ++ K + ++ N +P+N TVY G +A +T
Sbjct: 188 WATRKPPAPKSTQENNTKQL---------RFEDVVNQSSPKN----CTVYCGGIASGLTD 234
Query: 277 LDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCS 336
+ + F G I E+RV +KG+ FVR+STH AA AI N T + G +KC
Sbjct: 235 QLMRQTFSPFGQ--IMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTT---IEGHVVKCY 289
Query: 337 WGSK 340
WG +
Sbjct: 290 WGKE 293
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 103/236 (43%), Gaps = 57/236 (24%)
Query: 136 EDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSR----GFG----- 186
ED ++VG+LS +VT+ + FS C +++ +Q R GF
Sbjct: 2 EDDGQPRTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEQPDSSRRVNSVGFSVLQHT 61
Query: 187 ------FVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELT 240
FV F +DA +A+ + G+ + ++++ NWAT
Sbjct: 62 SNDPYCFVEFYEHRDAAAALAAMNGRKILGKEVKVNWATT-------------------- 101
Query: 241 NGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLG----AGVIEEVRV 296
S K+T+N + V+VG+L+PE+T D+ F G A V++++
Sbjct: 102 --PSSQKKDTSN---------HFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMAT 150
Query: 297 QRDKGFGFVRYSTHAEAALAI-QMGNTTQSSYLFGKQMKCSWGSK--PTPPGTSSN 349
+ KG+GFV + +A AI MG +L G+Q++ +W ++ P P T N
Sbjct: 151 GKSKGYGFVSFYNKLDAENAIVHMG----GQWLGGRQIRTNWATRKPPAPKSTQEN 202
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/204 (21%), Positives = 86/204 (42%), Gaps = 29/204 (14%)
Query: 52 DPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRK----DKSSYGFIHYFDRRSA 107
D S V+VG++ ++T ++ F+ G + ++++ YGF+ ++++ A
Sbjct: 108 DTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDA 167
Query: 108 AMAILSLNGRHLFGQPIKVNWAY------ASGQREDTS-------------GHFNIFVGD 148
AI+ + G+ L G+ I+ NWA S Q +T + ++ G
Sbjct: 168 ENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYCGG 227
Query: 149 LSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWL 208
++ +TD + FS + + RV +G+ FV F + A AI + G +
Sbjct: 228 IASGLTDQLMRQTFSPFGQIMEIRVF------PEKGYSFVRFSTHESAAHAIVSVNGTTI 281
Query: 209 GSRQIRCNWATKGAGNNEDKQSSD 232
++C W + ++ Q D
Sbjct: 282 EGHVVKCYWGKESPDMTKNFQQVD 305
>gi|351710501|gb|EHB13420.1| Nucleolysin TIAR [Heterocephalus glaber]
Length = 392
Score = 201 bits (511), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 119/304 (39%), Positives = 176/304 (57%), Gaps = 38/304 (12%)
Query: 57 RSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLI------RKDKSS-------------YG 97
R++YVGN+ VTE L+ ++FS GP + CK+I R+ SS Y
Sbjct: 9 RTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEQPDSRRVNSSVGFSVLQHTSNDPYC 68
Query: 98 FIHYFDRRSAAMAILSLNGRHLFGQPIKVNWAYA-SGQREDTSGHFNIFVGDLSPEVTDA 156
F+ +++ R AA A+ ++NGR + G+ +KVNWA S Q++DTS HF++FVGDLSPE+T
Sbjct: 69 FVEFYEHRDAAAALAAMNGRKILGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTE 128
Query: 157 TLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCN 216
+ + F+ + SDARV+ D TG+S+G+GFVSF N+ DA++AI + G+WLG RQIR N
Sbjct: 129 DIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTN 188
Query: 217 WATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQ 276
WAT+ + Q ++ K + ++ N +P+N TVY G +A +T
Sbjct: 189 WATRKPPAPKSTQENNTKQL---------RFEDVVNQSSPKN----CTVYCGGIASGLTD 235
Query: 277 LDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCS 336
+ + F G I E+RV +KG+ FVR+STH AA AI N T + G +KC
Sbjct: 236 QLMRQTFSPFGQ--IMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTT---IEGHVVKCY 290
Query: 337 WGSK 340
WG +
Sbjct: 291 WGKE 294
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 104/236 (44%), Gaps = 57/236 (24%)
Query: 136 EDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGR----SRGFG----- 186
ED ++VG+LS +VT+ + FS C +++ +Q R S GF
Sbjct: 3 EDDGQPRTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEQPDSRRVNSSVGFSVLQHT 62
Query: 187 ------FVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELT 240
FV F +DA +A+ + G+ + ++++ NWAT
Sbjct: 63 SNDPYCFVEFYEHRDAAAALAAMNGRKILGKEVKVNWATT-------------------- 102
Query: 241 NGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLG----AGVIEEVRV 296
S K+T+N + V+VG+L+PE+T D+ F G A V++++
Sbjct: 103 --PSSQKKDTSN---------HFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMAT 151
Query: 297 QRDKGFGFVRYSTHAEAALAI-QMGNTTQSSYLFGKQMKCSWGSK--PTPPGTSSN 349
+ KG+GFV + +A AI MG +L G+Q++ +W ++ P P T N
Sbjct: 152 GKSKGYGFVSFYNKLDAENAIVHMG----GQWLGGRQIRTNWATRKPPAPKSTQEN 203
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/204 (21%), Positives = 86/204 (42%), Gaps = 29/204 (14%)
Query: 52 DPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRK----DKSSYGFIHYFDRRSA 107
D S V+VG++ ++T ++ F+ G + ++++ YGF+ ++++ A
Sbjct: 109 DTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDA 168
Query: 108 AMAILSLNGRHLFGQPIKVNWAY------ASGQREDTS-------------GHFNIFVGD 148
AI+ + G+ L G+ I+ NWA S Q +T + ++ G
Sbjct: 169 ENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYCGG 228
Query: 149 LSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWL 208
++ +TD + FS + + RV +G+ FV F + A AI + G +
Sbjct: 229 IASGLTDQLMRQTFSPFGQIMEIRVF------PEKGYSFVRFSTHESAAHAIVSVNGTTI 282
Query: 209 GSRQIRCNWATKGAGNNEDKQSSD 232
++C W + ++ Q D
Sbjct: 283 EGHVVKCYWGKESPDMTKNFQQVD 306
>gi|77695912|ref|NP_001029097.1| nucleolysin TIAR isoform 2 [Homo sapiens]
gi|73998714|ref|XP_852319.1| PREDICTED: nucleolysin TIAR isoform 2 [Canis lupus familiaris]
gi|114633030|ref|XP_001154768.1| PREDICTED: nucleolysin TIAR isoform 6 [Pan troglodytes]
gi|311271911|ref|XP_003133244.1| PREDICTED: nucleolysin TIAR isoform 2 [Sus scrofa]
gi|338716472|ref|XP_003363459.1| PREDICTED: nucleolysin TIAR [Equus caballus]
gi|390473251|ref|XP_003734574.1| PREDICTED: nucleolysin TIAR isoform 2 [Callithrix jacchus]
gi|395827973|ref|XP_003787162.1| PREDICTED: nucleolysin TIAR isoform 1 [Otolemur garnettii]
gi|397510639|ref|XP_003825700.1| PREDICTED: nucleolysin TIAR isoform 2 [Pan paniscus]
gi|402881652|ref|XP_003904380.1| PREDICTED: nucleolysin TIAR isoform 2 [Papio anubis]
gi|426253186|ref|XP_004020281.1| PREDICTED: nucleolysin TIAR isoform 2 [Ovis aries]
gi|426366374|ref|XP_004050233.1| PREDICTED: nucleolysin TIAR isoform 2 [Gorilla gorilla gorilla]
gi|158255404|dbj|BAF83673.1| unnamed protein product [Homo sapiens]
gi|380783709|gb|AFE63730.1| nucleolysin TIAR isoform 2 [Macaca mulatta]
gi|383408327|gb|AFH27377.1| nucleolysin TIAR isoform 2 [Macaca mulatta]
gi|384942768|gb|AFI34989.1| nucleolysin TIAR isoform 2 [Macaca mulatta]
gi|410218476|gb|JAA06457.1| TIA1 cytotoxic granule-associated RNA binding protein-like 1 [Pan
troglodytes]
gi|410257384|gb|JAA16659.1| TIA1 cytotoxic granule-associated RNA binding protein-like 1 [Pan
troglodytes]
gi|410296998|gb|JAA27099.1| TIA1 cytotoxic granule-associated RNA binding protein-like 1 [Pan
troglodytes]
Length = 392
Score = 201 bits (511), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 119/304 (39%), Positives = 176/304 (57%), Gaps = 38/304 (12%)
Query: 57 RSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLI------RKDKSS-------------YG 97
R++YVGN+ VTE L+ ++FS GP + CK+I R+ SS Y
Sbjct: 9 RTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEQPDSRRVNSSVGFSVLQHTSNDPYC 68
Query: 98 FIHYFDRRSAAMAILSLNGRHLFGQPIKVNWAYA-SGQREDTSGHFNIFVGDLSPEVTDA 156
F+ +++ R AA A+ ++NGR + G+ +KVNWA S Q++DTS HF++FVGDLSPE+T
Sbjct: 69 FVEFYEHRDAAAALAAMNGRKILGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTE 128
Query: 157 TLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCN 216
+ + F+ + SDARV+ D TG+S+G+GFVSF N+ DA++AI + G+WLG RQIR N
Sbjct: 129 DIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTN 188
Query: 217 WATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQ 276
WAT+ + Q ++ K + ++ N +P+N TVY G +A +T
Sbjct: 189 WATRKPPAPKSTQENNTKQL---------RFEDVVNQSSPKN----CTVYCGGIASGLTD 235
Query: 277 LDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCS 336
+ + F G I E+RV +KG+ FVR+STH AA AI N T + G +KC
Sbjct: 236 QLMRQTFSPFGQ--IMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTT---IEGHVVKCY 290
Query: 337 WGSK 340
WG +
Sbjct: 291 WGKE 294
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 104/236 (44%), Gaps = 57/236 (24%)
Query: 136 EDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGR----SRGFG----- 186
ED ++VG+LS +VT+ + FS C +++ +Q R S GF
Sbjct: 3 EDDGQPRTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEQPDSRRVNSSVGFSVLQHT 62
Query: 187 ------FVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELT 240
FV F +DA +A+ + G+ + ++++ NWAT
Sbjct: 63 SNDPYCFVEFYEHRDAAAALAAMNGRKILGKEVKVNWATT-------------------- 102
Query: 241 NGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLG----AGVIEEVRV 296
S K+T+N + V+VG+L+PE+T D+ F G A V++++
Sbjct: 103 --PSSQKKDTSN---------HFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMAT 151
Query: 297 QRDKGFGFVRYSTHAEAALAI-QMGNTTQSSYLFGKQMKCSWGSK--PTPPGTSSN 349
+ KG+GFV + +A AI MG +L G+Q++ +W ++ P P T N
Sbjct: 152 GKSKGYGFVSFYNKLDAENAIVHMG----GQWLGGRQIRTNWATRKPPAPKSTQEN 203
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/204 (21%), Positives = 86/204 (42%), Gaps = 29/204 (14%)
Query: 52 DPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRK----DKSSYGFIHYFDRRSA 107
D S V+VG++ ++T ++ F+ G + ++++ YGF+ ++++ A
Sbjct: 109 DTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDA 168
Query: 108 AMAILSLNGRHLFGQPIKVNWAY------ASGQREDTS-------------GHFNIFVGD 148
AI+ + G+ L G+ I+ NWA S Q +T + ++ G
Sbjct: 169 ENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYCGG 228
Query: 149 LSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWL 208
++ +TD + FS + + RV +G+ FV F + A AI + G +
Sbjct: 229 IASGLTDQLMRQTFSPFGQIMEIRVF------PEKGYSFVRFSTHESAAHAIVSVNGTTI 282
Query: 209 GSRQIRCNWATKGAGNNEDKQSSD 232
++C W + ++ Q D
Sbjct: 283 EGHVVKCYWGKESPDMTKNFQQVD 306
>gi|295669832|ref|XP_002795464.1| TIA1 cytotoxic granule-associated RNA binding protein
[Paracoccidioides sp. 'lutzii' Pb01]
gi|226285398|gb|EEH40964.1| TIA1 cytotoxic granule-associated RNA binding protein
[Paracoccidioides sp. 'lutzii' Pb01]
Length = 501
Score = 201 bits (511), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 121/297 (40%), Positives = 163/297 (54%), Gaps = 43/297 (14%)
Query: 57 RSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSSYGFIHYFDRRSAAMAILSLNG 116
R++YVG + +VTE +L+++F +TG V+ K+I DK+
Sbjct: 100 RALYVGGLDPRVTEDILRQIFETTGHVQSVKII-PDKNE--------------------- 137
Query: 117 RHLFGQPIKVNWAYASG--QREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVM 174
I+VNWAY S +EDTS HF+IFVGDLS EV D L FS + S S+ARVM
Sbjct: 138 -------IRVNWAYQSNSNNKEDTSNHFHIFVGDLSNEVNDEVLLQAFSAFGSVSEARVM 190
Query: 175 WDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT-KGAGNNEDKQSSDA 233
WD KTGRSRG+GFV+FR + DA+ A++ + G+WLGSR IRCNWA KG + +Q+ A
Sbjct: 191 WDMKTGRSRGYGFVAFRERSDAEKALSSMDGEWLGSRAIRCNWANQKGQPSISQQQAMAA 250
Query: 234 KSVVELT----NGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAG 289
+ T + G ++ + + TT YVGNL P TQ DL F + G
Sbjct: 251 MGMTPTTPFGHHHFPTHGVQSYDMVVAQTPQWQTTCYVGNLTPYTTQNDLVPLFQNF--G 308
Query: 290 VIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSY-LFGKQMKCSWGSKPTPPG 345
+ E R Q D+GF FV+ TH AA+AI S Y + G+ +KCSWG P G
Sbjct: 309 YVVETRFQADRGFAFVKMDTHENAAMAI----CQLSGYNVNGRPLKCSWGKDRPPTG 361
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 85/208 (40%), Gaps = 47/208 (22%)
Query: 52 DPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS----YGFIHYFDRRSA 107
D S ++VG++ +V + +L + FS+ G V +++ K+ YGF+ + +R A
Sbjct: 153 DTSNHFHIFVGDLSNEVNDEVLLQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRERSDA 212
Query: 108 AMAILSLNGRHLFGQPIKVNWAYASGQREDTS---------------GHFNI-------- 144
A+ S++G L + I+ NWA GQ + GH +
Sbjct: 213 EKALSSMDGEWLGSRAIRCNWANQKGQPSISQQQAMAAMGMTPTTPFGHHHFPTHGVQSY 272
Query: 145 --------------FVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSF 190
+VG+L+P T L F + + R D RGF FV
Sbjct: 273 DMVVAQTPQWQTTCYVGNLTPYTTQNDLVPLFQNFGYVVETRFQAD------RGFAFVKM 326
Query: 191 RNQQDAQSAINDLTGKWLGSRQIRCNWA 218
++A AI L+G + R ++C+W
Sbjct: 327 DTHENAAMAICQLSGYNVNGRPLKCSWG 354
>gi|326936530|ref|XP_003214306.1| PREDICTED: nucleolysin TIA-1 isoform p40-like [Meleagris gallopavo]
Length = 423
Score = 201 bits (511), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 119/298 (39%), Positives = 171/298 (57%), Gaps = 33/298 (11%)
Query: 60 YVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRRSAAMAILSLNGR 117
YVGN+ VTE L+ ++FS GP + CK+I + Y F+ +++ R AA A+ ++NGR
Sbjct: 50 YVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFYEHRHAASALAAMNGR 109
Query: 118 HLFGQPIKVNWAYA-SGQREDTSG-----------HFNIFVGDLSPEVTDATLFACFSVY 165
+ G+ +KVNWA S Q++DTS HF++FVGDLSPE+T + A F+ +
Sbjct: 110 KIMGKEVKVNWATTPSSQKKDTSSSTVVSTQASQDHFHVFVGDLSPEITTEDIKAAFAPF 169
Query: 166 PSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNN 225
SDARV+ D TG+S+G+GFVSF N+ DA++AI + G+WLG RQIR NWAT+
Sbjct: 170 GRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAP 229
Query: 226 EDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHS 285
+ S+ K + S +D N +P N TVY G + +T+ + + F
Sbjct: 230 KSTYESNTKQL------SYDD---VVNQSSPSN----CTVYCGGVTSGLTEQLMRQTFSP 276
Query: 286 LGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSKPTP 343
G I E+RV DKG+ FVR+++H AA AI N T + G +KC WG K TP
Sbjct: 277 FGQ--IMEIRVFPDKGYSFVRFNSHESAAHAIVSVNGTT---IEGHVVKCYWG-KETP 328
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 43/76 (56%), Gaps = 3/76 (3%)
Query: 53 PSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSSYGFIHYFDRRSAAMAIL 112
PS C +VY G + + +TE L+++ FS G + ++ DK Y F+ + SAA AI+
Sbjct: 251 PSNC-TVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVF-PDK-GYSFVRFNSHESAAHAIV 307
Query: 113 SLNGRHLFGQPIKVNW 128
S+NG + G +K W
Sbjct: 308 SVNGTTIEGHVVKCYW 323
>gi|431895395|gb|ELK04911.1| Nucleolysin TIAR [Pteropus alecto]
Length = 428
Score = 200 bits (509), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 123/323 (38%), Positives = 182/323 (56%), Gaps = 39/323 (12%)
Query: 46 NLPPGFDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLI------RKDKSS---- 95
+LP + + YVGN+ VTE L+ ++FS GP + CK+I R+ SS
Sbjct: 34 HLPTTYSSFLPKEEYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEQPDSRRVNSSVGFS 93
Query: 96 ---------YGFIHYFDRRSAAMAILSLNGRHLFGQPIKVNWAYA-SGQREDTSGHFNIF 145
Y F+ +++ R AA A+ ++NGR + G+ +KVNWA S Q++DTS HF++F
Sbjct: 94 VLQHTSNDPYCFVEFYEHRDAAAALAAMNGRKILGKEVKVNWATTPSSQKKDTSNHFHVF 153
Query: 146 VGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTG 205
VGDLSPE+T + + F+ + SDARV+ D TG+S+G+GFVSF N+ DA++AI + G
Sbjct: 154 VGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGG 213
Query: 206 KWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTV 265
+WLG RQIR NWAT+ + Q ++ K + ++ N +P+N TV
Sbjct: 214 QWLGGRQIRTNWATRKPPAPKSTQENNTKQL---------RFEDVVNQSSPKN----CTV 260
Query: 266 YVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQS 325
Y G +A +T + + F G I E+RV +KG+ FVR+STH AA AI N T
Sbjct: 261 YCGGIASGLTDQLMRQTFSPFGQ--IMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTA- 317
Query: 326 SYLFGKQMKCSWGSKPTPPGTSS 348
+ G +KC WG K +P T +
Sbjct: 318 --IEGHVVKCYWG-KESPDMTKN 337
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/204 (21%), Positives = 86/204 (42%), Gaps = 29/204 (14%)
Query: 52 DPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRK----DKSSYGFIHYFDRRSA 107
D S V+VG++ ++T ++ F+ G + ++++ YGF+ ++++ A
Sbjct: 145 DTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDA 204
Query: 108 AMAILSLNGRHLFGQPIKVNWAY------ASGQREDTS-------------GHFNIFVGD 148
AI+ + G+ L G+ I+ NWA S Q +T + ++ G
Sbjct: 205 ENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYCGG 264
Query: 149 LSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWL 208
++ +TD + FS + + RV +G+ FV F + A AI + G +
Sbjct: 265 IASGLTDQLMRQTFSPFGQIMEIRVF------PEKGYSFVRFSTHESAAHAIVSVNGTAI 318
Query: 209 GSRQIRCNWATKGAGNNEDKQSSD 232
++C W + ++ Q D
Sbjct: 319 EGHVVKCYWGKESPDMTKNFQQVD 342
>gi|89272470|emb|CAJ83096.1| OTTXETP00000006403 [Xenopus (Silurana) tropicalis]
Length = 389
Score = 200 bits (509), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 119/312 (38%), Positives = 178/312 (57%), Gaps = 39/312 (12%)
Query: 57 RSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS-------------------YG 97
R++YVGN+ VTE L+ ++FS GP + CK+I + S Y
Sbjct: 8 RTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEQTDSRRVGASVSFPVLPNTNNDPYC 67
Query: 98 FIHYFDRRSAAMAILSLNGRHLFGQPIKVNWAYA-SGQREDTSGHFNIFVGDLSPEVTDA 156
F+ +++ R AA A+ ++NGR + G+ +KVNWA S Q++DTS HF++FVGDLSPE+T
Sbjct: 68 FVEFYEHRDAAAALAAMNGRKILGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTE 127
Query: 157 TLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCN 216
+ + F+ + SDARV+ D TG+S+G+GFVSF N+ DA++AI + G+WLG RQIR N
Sbjct: 128 DIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTN 187
Query: 217 WATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQ 276
WAT+ + Q ++ K + ++ N +P+N TVY G + +T+
Sbjct: 188 WATRKPPAPKSTQENNTKQL---------RFEDVVNQSSPKN----CTVYCGGIGSGLTE 234
Query: 277 LDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCS 336
+ + F G I E+RV +KG+ F+R+STH AA AI N T + G +KC
Sbjct: 235 QLMRQTFGVFGQ--ILEIRVFPEKGYSFIRFSTHDSAAHAIVSVNGTT---IEGHVVKCY 289
Query: 337 WGSKPTPPGTSS 348
WG K TP T +
Sbjct: 290 WG-KETPDMTKN 300
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 103/236 (43%), Gaps = 57/236 (24%)
Query: 136 EDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRG----------- 184
ED ++VG+LS +VT+ + FS C +++ +Q R G
Sbjct: 2 EDDGQPRTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEQTDSRRVGASVSFPVLPNT 61
Query: 185 ----FGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELT 240
+ FV F +DA +A+ + G+ + ++++ NWAT
Sbjct: 62 NNDPYCFVEFYEHRDAAAALAAMNGRKILGKEVKVNWATT-------------------- 101
Query: 241 NGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLG----AGVIEEVRV 296
S K+T+N + V+VG+L+PE+T D+ F G A V++++
Sbjct: 102 --PSSQKKDTSN---------HFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMAT 150
Query: 297 QRDKGFGFVRYSTHAEAALAI-QMGNTTQSSYLFGKQMKCSWGSK--PTPPGTSSN 349
+ KG+GFV + +A AI MG +L G+Q++ +W ++ P P T N
Sbjct: 151 GKSKGYGFVSFYNKLDAENAIVHMG----GQWLGGRQIRTNWATRKPPAPKSTQEN 202
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/204 (20%), Positives = 84/204 (41%), Gaps = 29/204 (14%)
Query: 52 DPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRK----DKSSYGFIHYFDRRSA 107
D S V+VG++ ++T ++ F+ G + ++++ YGF+ ++++ A
Sbjct: 108 DTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDA 167
Query: 108 AMAILSLNGRHLFGQPIKVNWAY------ASGQREDTS-------------GHFNIFVGD 148
AI+ + G+ L G+ I+ NWA S Q +T + ++ G
Sbjct: 168 ENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYCGG 227
Query: 149 LSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWL 208
+ +T+ + F V+ + RV +G+ F+ F A AI + G +
Sbjct: 228 IGSGLTEQLMRQTFGVFGQILEIRVF------PEKGYSFIRFSTHDSAAHAIVSVNGTTI 281
Query: 209 GSRQIRCNWATKGAGNNEDKQSSD 232
++C W + ++ Q D
Sbjct: 282 EGHVVKCYWGKETPDMTKNFQQVD 305
>gi|326473644|gb|EGD97653.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Trichophyton tonsurans CBS 112818]
Length = 470
Score = 200 bits (508), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 122/297 (41%), Positives = 164/297 (55%), Gaps = 43/297 (14%)
Query: 57 RSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSSYGFIHYFDRRSAAMAILSLNG 116
R++YVG + +VTE +L+++F +TG V+ K+I DK+
Sbjct: 102 RALYVGGLDPRVTEDILKQIFETTGHVQSVKII-PDKNE--------------------- 139
Query: 117 RHLFGQPIKVNWAYAS--GQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVM 174
I+VNWAY S +EDTS HF+IFVGDLS EV D L FS S S+ARVM
Sbjct: 140 -------IRVNWAYQSNTASKEDTSSHFHIFVGDLSNEVNDEVLLQAFSACGSVSEARVM 192
Query: 175 WDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT-KGAGNNEDKQSSDA 233
WD KTGRSRG+GFV+FR + DA+ A++ + G+WLGSR IRCNWA KG + +Q+ A
Sbjct: 193 WDMKTGRSRGYGFVAFRERADAEKALSSMDGEWLGSRAIRCNWANQKGQPSISQQQAMAA 252
Query: 234 KSVVELT----NGSSEDGKETTNTEAPENNPQY-TTVYVGNLAPEVTQLDLHRHFHSLGA 288
+ T + G ++ + + PQ+ TT YVGNL P TQ DL F +
Sbjct: 253 MGMTPTTPFGHHHFPTHGVQSYDMVV-QQTPQWQTTCYVGNLTPYTTQNDLIPLFQNF-- 309
Query: 289 GVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSKPTPPG 345
G + E R Q D+GF FV+ TH AA+AI N + G+ +KCSWG P G
Sbjct: 310 GYVVETRFQADRGFAFVKMDTHENAAMAICQLNGYN---VNGRPLKCSWGKDRPPTG 363
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 85/207 (41%), Gaps = 47/207 (22%)
Query: 52 DPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS----YGFIHYFDRRSA 107
D S+ ++VG++ +V + +L + FS+ G V +++ K+ YGF+ + +R A
Sbjct: 155 DTSSHFHIFVGDLSNEVNDEVLLQAFSACGSVSEARVMWDMKTGRSRGYGFVAFRERADA 214
Query: 108 AMAILSLNGRHLFGQPIKVNWAYASGQREDTS---------------GHFNI-------- 144
A+ S++G L + I+ NWA GQ + GH +
Sbjct: 215 EKALSSMDGEWLGSRAIRCNWANQKGQPSISQQQAMAAMGMTPTTPFGHHHFPTHGVQSY 274
Query: 145 --------------FVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSF 190
+VG+L+P T L F + + R D RGF FV
Sbjct: 275 DMVVQQTPQWQTTCYVGNLTPYTTQNDLIPLFQNFGYVVETRFQAD------RGFAFVKM 328
Query: 191 RNQQDAQSAINDLTGKWLGSRQIRCNW 217
++A AI L G + R ++C+W
Sbjct: 329 DTHENAAMAICQLNGYNVNGRPLKCSW 355
Score = 42.7 bits (99), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 48/92 (52%), Gaps = 9/92 (9%)
Query: 54 STCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSSYGFIHYFDRRSAAMAILS 113
+TC YVGN+ T+ L +F + G V + + D+ + F+ +AAMAI
Sbjct: 286 TTC---YVGNLTPYTTQNDLIPLFQNFGYVVETRF-QADRG-FAFVKMDTHENAAMAICQ 340
Query: 114 LNGRHLFGQPIKVNWAYASGQREDTSGHFNIF 145
LNG ++ G+P+K +W G+ +G F+ +
Sbjct: 341 LNGYNVNGRPLKCSW----GKDRPPTGQFDAY 368
>gi|346972032|gb|EGY15484.1| nucleolysin TIA-1 [Verticillium dahliae VdLs.17]
Length = 489
Score = 200 bits (508), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 132/347 (38%), Positives = 176/347 (50%), Gaps = 21/347 (6%)
Query: 77 FSSTGPVEGCKLIRKDKS-SYGFIHYFDRRSAAMAILSLNGRHLFGQPIKVNWAYASG-- 133
FS G I + K +YGF+ Y D +A A+ +LNGR + I+VNWAY S
Sbjct: 118 FSCLGTRRAADTIFQQKGYNYGFVEYDDPGAAERAMQTLNGRRVHQSEIRVNWAYQSNTT 177
Query: 134 QREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQ 193
+EDTS HF+IFVGDLS EV D L F+ + S S+ARVMWD KTGRSRG+GFV+FR++
Sbjct: 178 SKEDTSNHFHIFVGDLSNEVNDEILSQAFAAFGSVSEARVMWDMKTGRSRGYGFVAFRDR 237
Query: 194 QDAQSAINDLTGKWLGSRQIRCNWAT-KGAGNNEDKQSSDAKSVVELT----NGSSEDGK 248
DA+ A++ + G+WLGSR IRCNWA KG + +Q+ A + T + G
Sbjct: 238 PDAEKALSSMDGEWLGSRAIRCNWANQKGQPSIAQQQAMQAMGMTPTTPFGHHQFPAHGM 297
Query: 249 ETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYS 308
+ + TTVYVGNL P T D+ F + G + E R Q D+GF F++
Sbjct: 298 ASYEVILAQTPNWQTTVYVGNLTPYTTPNDVVPLFQNF--GFVVESRFQADRGFAFIKME 355
Query: 309 THAEAALAIQMGNTTQSSYLFGKQMKCSWGSKPTPPGTSSNPLPP------PAAAPIPGL 362
+H AA+AI N + G+ +KCSWG TP ++ P P +A PG
Sbjct: 356 SHEAAAMAICQMNGYN---VNGRPLKCSWGKDKTP--NAAGGFDPAQQGYSPQSATAPGA 410
Query: 363 SAADLLAYERQIAMSKMGGVHALMHPQAQHPLKQAAMGVGSAGASQA 409
AY Q G P AQ P A + G A
Sbjct: 411 YPGTPTAYFPQYGAQYSGQPGNYGGPAAQSPAGYGAQPMAYGGPQSA 457
>gi|47228429|emb|CAG05249.1| unnamed protein product [Tetraodon nigroviridis]
Length = 411
Score = 199 bits (506), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 115/286 (40%), Positives = 163/286 (56%), Gaps = 21/286 (7%)
Query: 60 YVGNIHTQVTEPLLQEVFSSTGPVEGCKLI--RKDKSSYGFIHYFDRRSAAMAILSLNGR 117
YVGN+ VTE L+ E+F GP + CK+I Y F+ +++ R A I ++NGR
Sbjct: 1 YVGNLSRDVTEALILELFGQIGPCKSCKMIVDTAGHDPYCFVEFYEHRHATATIAAMNGR 60
Query: 118 HLFGQPIKVNWAYA-SGQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWD 176
+ G+ +KVNWA + Q++DTS HF++FVGDLSPE+T + A F + SD RV+ D
Sbjct: 61 KILGKEVKVNWATTPTSQKKDTSSHFHVFVGDLSPEITTDDIKAAFGPFGKISDCRVVKD 120
Query: 177 QKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSSDAKSV 236
TG+S+G+GFVSF N+ DA++AI + G+WLG RQIR NWAT+ K + +
Sbjct: 121 MATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATR-------KPAPKTTNE 173
Query: 237 VELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRV 296
T S D E N +P N TVY G + +T+ + + F G I E+RV
Sbjct: 174 TTNTKQLSFD--EVVNQSSPSN----CTVYCGGVTTGLTEQIMRQTFSPFGH--IMEIRV 225
Query: 297 QRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSKPT 342
DKG+ FVR+++H AA AI N T + G +KC WG + T
Sbjct: 226 FPDKGYSFVRFNSHEAAAHAIVSVNGTT---IEGYVVKCYWGKETT 268
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 92/207 (44%), Gaps = 47/207 (22%)
Query: 145 FVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLT 204
+VG+LS +VT+A + F C +++ D T + FV F + A + I +
Sbjct: 1 YVGNLSRDVTEALILELFGQIGPCKSCKMIVD--TAGHDPYCFVEFYEHRHATATIAAMN 58
Query: 205 GKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTT 264
G+ + ++++ NWAT T T ++ +
Sbjct: 59 GRKILGKEVKVNWAT-------------------------------TPTSQKKDTSSHFH 87
Query: 265 VYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRD------KGFGFVRYSTHAEAALAIQ 318
V+VG+L+PE+T D+ F G I + RV +D KG+GFV + +A AIQ
Sbjct: 88 VFVGDLSPEITTDDIKAAFGPFGK--ISDCRVVKDMATGKSKGYGFVSFFNKWDAENAIQ 145
Query: 319 -MGNTTQSSYLFGKQMKCSWGS-KPTP 343
MG +L G+Q++ +W + KP P
Sbjct: 146 QMGG----QWLGGRQIRTNWATRKPAP 168
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/189 (21%), Positives = 82/189 (43%), Gaps = 29/189 (15%)
Query: 52 DPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRK----DKSSYGFIHYFDRRSA 107
D S+ V+VG++ ++T ++ F G + C++++ YGF+ +F++ A
Sbjct: 81 DTSSHFHVFVGDLSPEITTDDIKAAFGPFGKISDCRVVKDMATGKSKGYGFVSFFNKWDA 140
Query: 108 AMAILSLNGRHLFGQPIKVNWA-------------------YASGQREDTSGHFNIFVGD 148
AI + G+ L G+ I+ NWA + + + + ++ G
Sbjct: 141 ENAIQQMGGQWLGGRQIRTNWATRKPAPKTTNETTNTKQLSFDEVVNQSSPSNCTVYCGG 200
Query: 149 LSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWL 208
++ +T+ + FS + + RV D +G+ FV F + + A AI + G +
Sbjct: 201 VTTGLTEQIMRQTFSPFGHIMEIRVFPD------KGYSFVRFNSHEAAAHAIVSVNGTTI 254
Query: 209 GSRQIRCNW 217
++C W
Sbjct: 255 EGYVVKCYW 263
>gi|395501989|ref|XP_003755369.1| PREDICTED: nucleolysin TIAR [Sarcophilus harrisii]
Length = 392
Score = 199 bits (506), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 121/309 (39%), Positives = 177/309 (57%), Gaps = 39/309 (12%)
Query: 60 YVGNIHTQVTEPLLQEVFSSTGPVEGCKLI------RKDKSS-------------YGFIH 100
YVGN+ VTE L+ ++FS GP + CK+I R+ SS Y F+
Sbjct: 15 YVGNLSRDVTEVLILQLFSQIGPCKSCKMITEQPDSRRVNSSVGFSVLQHTSNDPYCFVE 74
Query: 101 YFDRRSAAMAILSLNGRHLFGQPIKVNWAYA-SGQREDTSGHFNIFVGDLSPEVTDATLF 159
+++ R AA A+ ++NGR + G+ +KVNWA S Q++DTS HF++FVGDLSPE+T +
Sbjct: 75 FYEHRDAAAALAAMNGRKILGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIK 134
Query: 160 ACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT 219
+ F+ + SDARV+ D TG+S+G+GFVSF N+ DA++AI + G+WLG RQIR NWAT
Sbjct: 135 SAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWAT 194
Query: 220 KGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDL 279
+ + Q ++ K + ++ N +P+N TVY G +A +T +
Sbjct: 195 RKPPAPKSTQENNTKQL---------RFEDVVNQSSPKN----CTVYCGGIASGLTDQLM 241
Query: 280 HRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGS 339
+ F G I E+RV +KG+ FVR+STH AA AI N T + G +KC WG
Sbjct: 242 RQTFSPFGQ--IMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTT---IEGHVVKCYWG- 295
Query: 340 KPTPPGTSS 348
K +P T +
Sbjct: 296 KESPDMTKN 304
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 102/229 (44%), Gaps = 57/229 (24%)
Query: 143 NIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGR----SRGFG-----------F 187
N +VG+LS +VT+ + FS C +++ +Q R S GF F
Sbjct: 13 NSYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEQPDSRRVNSSVGFSVLQHTSNDPYCF 72
Query: 188 VSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDG 247
V F +DA +A+ + G+ + ++++ NWAT S
Sbjct: 73 VEFYEHRDAAAALAAMNGRKILGKEVKVNWATT----------------------PSSQK 110
Query: 248 KETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLG----AGVIEEVRVQRDKGFG 303
K+T+N + V+VG+L+PE+T D+ F G A V++++ + KG+G
Sbjct: 111 KDTSN---------HFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYG 161
Query: 304 FVRYSTHAEAALAI-QMGNTTQSSYLFGKQMKCSWGSK--PTPPGTSSN 349
FV + +A AI MG +L G+Q++ +W ++ P P T N
Sbjct: 162 FVSFYNKLDAENAIVHMG----GQWLGGRQIRTNWATRKPPAPKSTQEN 206
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/204 (21%), Positives = 86/204 (42%), Gaps = 29/204 (14%)
Query: 52 DPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRK----DKSSYGFIHYFDRRSA 107
D S V+VG++ ++T ++ F+ G + ++++ YGF+ ++++ A
Sbjct: 112 DTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDA 171
Query: 108 AMAILSLNGRHLFGQPIKVNWAY------ASGQREDTS-------------GHFNIFVGD 148
AI+ + G+ L G+ I+ NWA S Q +T + ++ G
Sbjct: 172 ENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYCGG 231
Query: 149 LSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWL 208
++ +TD + FS + + RV +G+ FV F + A AI + G +
Sbjct: 232 IASGLTDQLMRQTFSPFGQIMEIRVF------PEKGYSFVRFSTHESAAHAIVSVNGTTI 285
Query: 209 GSRQIRCNWATKGAGNNEDKQSSD 232
++C W + ++ Q D
Sbjct: 286 EGHVVKCYWGKESPDMTKNFQQVD 309
>gi|426253188|ref|XP_004020282.1| PREDICTED: nucleolysin TIAR isoform 3 [Ovis aries]
Length = 385
Score = 199 bits (505), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 117/298 (39%), Positives = 175/298 (58%), Gaps = 32/298 (10%)
Query: 57 RSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRRSAAMAILSL 114
R++YVGN+ VTE L+ ++FS GP + CK+I + S+ Y F+ +++ R AA A+ ++
Sbjct: 8 RTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSNDPYCFVEFYEHRDAAAALAAM 67
Query: 115 NGRHLFGQPIKVNWAYA-SGQREDTSG-----------HFNIFVGDLSPEVTDATLFACF 162
NGR + G+ +KVNWA S Q++DTS HF++FVGDLSPE+T + + F
Sbjct: 68 NGRKILGKEVKVNWATTPSSQKKDTSSKYFCCILRKSYHFHVFVGDLSPEITTEDIKSAF 127
Query: 163 SVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGA 222
+ + SDARV+ D TG+S+G+GFVSF N+ DA++AI + G+WLG RQIR NWAT+
Sbjct: 128 APFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKP 187
Query: 223 GNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRH 282
+ Q ++ K + ++ N +P+N TVY G +A +T + +
Sbjct: 188 PAPKSTQENNTKQL---------RFEDVVNQSSPKN----CTVYCGGIASGLTDQLMRQT 234
Query: 283 FHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSK 340
F G I E+RV +KG+ FVR+STH AA AI N T + G +KC WG +
Sbjct: 235 FSPFGQ--IMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTT---IEGHVVKCYWGKE 287
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 102/221 (46%), Gaps = 33/221 (14%)
Query: 136 EDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQD 195
ED ++VG+LS +VT+ + FS C +++ + + + FV F +D
Sbjct: 2 EDDGQPRTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSNDP--YCFVEFYEHRD 59
Query: 196 AQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEA 255
A +A+ + G+ + ++++ NWAT + +D S ++ +
Sbjct: 60 AAAALAAMNGRKILGKEVKVNWATTPSSQKKDTSSKYFCCILRKS--------------- 104
Query: 256 PENNPQYTTVYVGNLAPEVTQLDLHRHFHSLG----AGVIEEVRVQRDKGFGFVRYSTHA 311
+ V+VG+L+PE+T D+ F G A V++++ + KG+GFV +
Sbjct: 105 -----YHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKL 159
Query: 312 EAALAI-QMGNTTQSSYLFGKQMKCSWGSK--PTPPGTSSN 349
+A AI MG +L G+Q++ +W ++ P P T N
Sbjct: 160 DAENAIVHMG----GQWLGGRQIRTNWATRKPPAPKSTQEN 196
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/197 (20%), Positives = 84/197 (42%), Gaps = 29/197 (14%)
Query: 59 VYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRK----DKSSYGFIHYFDRRSAAMAILSL 114
V+VG++ ++T ++ F+ G + ++++ YGF+ ++++ A AI+ +
Sbjct: 109 VFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHM 168
Query: 115 NGRHLFGQPIKVNWAY------ASGQREDTS-------------GHFNIFVGDLSPEVTD 155
G+ L G+ I+ NWA S Q +T + ++ G ++ +TD
Sbjct: 169 GGQWLGGRQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGLTD 228
Query: 156 ATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRC 215
+ FS + + RV +G+ FV F + A AI + G + ++C
Sbjct: 229 QLMRQTFSPFGQIMEIRVF------PEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKC 282
Query: 216 NWATKGAGNNEDKQSSD 232
W + ++ Q D
Sbjct: 283 YWGKESPDMTKNFQQVD 299
>gi|449282273|gb|EMC89133.1| Nucleolysin TIAR, partial [Columba livia]
Length = 378
Score = 198 bits (504), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 118/301 (39%), Positives = 173/301 (57%), Gaps = 38/301 (12%)
Query: 60 YVGNIHTQVTEPLLQEVFSSTGPVEGCKLI------RKDKSS-------------YGFIH 100
YVGN+ VTE L+ ++FS GP + CK+I R+ SS Y F+
Sbjct: 1 YVGNLSRDVTEVLILQLFSQIGPCKSCKMITEQPDSRRVNSSVGFSVLQHTSNDPYCFVE 60
Query: 101 YFDRRSAAMAILSLNGRHLFGQPIKVNWAYA-SGQREDTSGHFNIFVGDLSPEVTDATLF 159
+++ R AA A+ ++NGR + G+ +KVNWA S Q++DTS HF++FVGDLSPE+T +
Sbjct: 61 FYEHRDAAAALAAMNGRKILGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIK 120
Query: 160 ACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT 219
+ F+ + SDARV+ D TG+S+G+GFVSF N+ DA++AI + G+WLG RQIR NWAT
Sbjct: 121 SAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWAT 180
Query: 220 KGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDL 279
+ + Q ++ K + ++ N +P+N TVY G +A +T +
Sbjct: 181 RKPPAPKSTQENNTKQL---------RFEDVVNQSSPKN----CTVYCGGIASGLTDQLM 227
Query: 280 HRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGS 339
+ F G I E+RV +KG+ FVR+STH AA AI N T + G +KC WG
Sbjct: 228 RQTFSPFGQ--IMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTT---IEGHVVKCYWGK 282
Query: 340 K 340
+
Sbjct: 283 E 283
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/204 (21%), Positives = 86/204 (42%), Gaps = 29/204 (14%)
Query: 52 DPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRK----DKSSYGFIHYFDRRSA 107
D S V+VG++ ++T ++ F+ G + ++++ YGF+ ++++ A
Sbjct: 98 DTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDA 157
Query: 108 AMAILSLNGRHLFGQPIKVNWAY------ASGQREDTS-------------GHFNIFVGD 148
AI+ + G+ L G+ I+ NWA S Q +T + ++ G
Sbjct: 158 ENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYCGG 217
Query: 149 LSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWL 208
++ +TD + FS + + RV +G+ FV F + A AI + G +
Sbjct: 218 IASGLTDQLMRQTFSPFGQIMEIRVF------PEKGYSFVRFSTHESAAHAIVSVNGTTI 271
Query: 209 GSRQIRCNWATKGAGNNEDKQSSD 232
++C W + ++ Q D
Sbjct: 272 EGHVVKCYWGKESPDMTKNFQQVD 295
>gi|417410268|gb|JAA51610.1| Putative apoptosis-promoting rna-binding protein tia-1/tiar rrm
superfamily, partial [Desmodus rotundus]
Length = 382
Score = 198 bits (503), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 118/301 (39%), Positives = 173/301 (57%), Gaps = 38/301 (12%)
Query: 60 YVGNIHTQVTEPLLQEVFSSTGPVEGCKLI------RKDKSS-------------YGFIH 100
YVGN+ VTE L+ ++FS GP + CK+I R+ SS Y F+
Sbjct: 1 YVGNLSRDVTEVLILQLFSQIGPCKSCKMITEQPDSRRVNSSVGFSVLQHTSNDPYCFVE 60
Query: 101 YFDRRSAAMAILSLNGRHLFGQPIKVNWAYA-SGQREDTSGHFNIFVGDLSPEVTDATLF 159
+++ R AA A+ ++NGR + G+ +KVNWA S Q++DTS HF++FVGDLSPE+T +
Sbjct: 61 FYEHRDAAAALAAMNGRKILGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIK 120
Query: 160 ACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT 219
+ F+ + SDARV+ D TG+S+G+GFVSF N+ DA++AI + G+WLG RQIR NWAT
Sbjct: 121 SAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWAT 180
Query: 220 KGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDL 279
+ + Q ++ K + ++ N +P+N TVY G +A +T +
Sbjct: 181 RKPPAPKSTQENNTKQL---------RFEDVVNQSSPKN----CTVYCGGIASGLTDQLM 227
Query: 280 HRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGS 339
+ F G I E+RV +KG+ FVR+STH AA AI N T + G +KC WG
Sbjct: 228 RQTFSPFGQ--IMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTT---IEGHVVKCYWGK 282
Query: 340 K 340
+
Sbjct: 283 E 283
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/204 (21%), Positives = 86/204 (42%), Gaps = 29/204 (14%)
Query: 52 DPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRK----DKSSYGFIHYFDRRSA 107
D S V+VG++ ++T ++ F+ G + ++++ YGF+ ++++ A
Sbjct: 98 DTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDA 157
Query: 108 AMAILSLNGRHLFGQPIKVNWAY------ASGQREDTS-------------GHFNIFVGD 148
AI+ + G+ L G+ I+ NWA S Q +T + ++ G
Sbjct: 158 ENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYCGG 217
Query: 149 LSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWL 208
++ +TD + FS + + RV +G+ FV F + A AI + G +
Sbjct: 218 IASGLTDQLMRQTFSPFGQIMEIRVF------PEKGYSFVRFSTHESAAHAIVSVNGTTI 271
Query: 209 GSRQIRCNWATKGAGNNEDKQSSD 232
++C W + ++ Q D
Sbjct: 272 EGHVVKCYWGKESPDMTKNFQQVD 295
>gi|355562824|gb|EHH19418.1| hypothetical protein EGK_20118, partial [Macaca mulatta]
gi|355766617|gb|EHH62534.1| hypothetical protein EGM_20905, partial [Macaca fascicularis]
gi|440900070|gb|ELR51281.1| Nucleolysin TIAR, partial [Bos grunniens mutus]
Length = 381
Score = 198 bits (503), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 118/301 (39%), Positives = 173/301 (57%), Gaps = 38/301 (12%)
Query: 60 YVGNIHTQVTEPLLQEVFSSTGPVEGCKLI------RKDKSS-------------YGFIH 100
YVGN+ VTE L+ ++FS GP + CK+I R+ SS Y F+
Sbjct: 1 YVGNLSRDVTEVLILQLFSQIGPCKSCKMITEQPDSRRVNSSVGFSVLQHTSNDPYCFVE 60
Query: 101 YFDRRSAAMAILSLNGRHLFGQPIKVNWAYA-SGQREDTSGHFNIFVGDLSPEVTDATLF 159
+++ R AA A+ ++NGR + G+ +KVNWA S Q++DTS HF++FVGDLSPE+T +
Sbjct: 61 FYEHRDAAAALAAMNGRKILGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIK 120
Query: 160 ACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT 219
+ F+ + SDARV+ D TG+S+G+GFVSF N+ DA++AI + G+WLG RQIR NWAT
Sbjct: 121 SAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWAT 180
Query: 220 KGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDL 279
+ + Q ++ K + ++ N +P+N TVY G +A +T +
Sbjct: 181 RKPPAPKSTQENNTKQL---------RFEDVVNQSSPKN----CTVYCGGIASGLTDQLM 227
Query: 280 HRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGS 339
+ F G I E+RV +KG+ FVR+STH AA AI N T + G +KC WG
Sbjct: 228 RQTFSPFGQ--IMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTT---IEGHVVKCYWGK 282
Query: 340 K 340
+
Sbjct: 283 E 283
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/204 (21%), Positives = 86/204 (42%), Gaps = 29/204 (14%)
Query: 52 DPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRK----DKSSYGFIHYFDRRSA 107
D S V+VG++ ++T ++ F+ G + ++++ YGF+ ++++ A
Sbjct: 98 DTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDA 157
Query: 108 AMAILSLNGRHLFGQPIKVNWAY------ASGQREDTS-------------GHFNIFVGD 148
AI+ + G+ L G+ I+ NWA S Q +T + ++ G
Sbjct: 158 ENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYCGG 217
Query: 149 LSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWL 208
++ +TD + FS + + RV +G+ FV F + A AI + G +
Sbjct: 218 IASGLTDQLMRQTFSPFGQIMEIRVF------PEKGYSFVRFSTHESAAHAIVSVNGTTI 271
Query: 209 GSRQIRCNWATKGAGNNEDKQSSD 232
++C W + ++ Q D
Sbjct: 272 EGHVVKCYWGKESPDMTKNFQQVD 295
>gi|196009388|ref|XP_002114559.1| hypothetical protein TRIADDRAFT_28438 [Trichoplax adhaerens]
gi|190582621|gb|EDV22693.1| hypothetical protein TRIADDRAFT_28438 [Trichoplax adhaerens]
Length = 292
Score = 198 bits (503), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 113/287 (39%), Positives = 166/287 (57%), Gaps = 18/287 (6%)
Query: 60 YVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRRSAAMAILSLNGR 117
Y+GN+ Q TE + E+F+ G ++ CKLI + + YGF+ Y ++ SAA A+ ++NG
Sbjct: 8 YIGNLDRQTTEQSIGELFAKFGAIKRCKLITEHGGNDPYGFVEYAEKNSAARALDAMNGY 67
Query: 118 HLFGQPIKVNWAYASGQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQ 177
+ IKVNWA S R+DT+ H++IFVGDLSP++ L + F+ + SDARV+ D
Sbjct: 68 SFGSRAIKVNWATNSSMRKDTN-HYHIFVGDLSPDIDTTLLRSAFNQFGHVSDARVVKDS 126
Query: 178 KTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVV 237
TG+ RG+GFVS++ + +A++A+ + G WLG R IR NWAT+ G ++Q+SD+ S
Sbjct: 127 ATGKPRGYGFVSYQFKHEAENAMQSMNGAWLGGRNIRTNWATRKPGATTNRQNSDSSSTK 186
Query: 238 ELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQ 297
L + E A N TVYVGNL+ T+ L R F G I ++RV
Sbjct: 187 SL------NYDEIYLQTAVYN----CTVYVGNLSAGTTEETLRRIFIPFGP--IADIRVF 234
Query: 298 RDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSKPTPP 344
DK + F+RY +H A AI + + T G Q+KCSWG + P
Sbjct: 235 PDKNYAFIRYMSHDHATNAIVVIHGTAVE---GSQVKCSWGKEANDP 278
Score = 45.1 bits (105), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSSYGFIHYFDRRSAAMAILSLNGR 117
+VYVGN+ TE L+ +F GP+ ++ DK +Y FI Y A AI+ ++G
Sbjct: 203 TVYVGNLSAGTTEETLRRIFIPFGPIADIRVF-PDK-NYAFIRYMSHDHATNAIVVIHGT 260
Query: 118 HLFGQPIKVNW 128
+ G +K +W
Sbjct: 261 AVEGSQVKCSW 271
>gi|126273037|ref|XP_001367935.1| PREDICTED: nucleolysin TIAR isoform 3 [Monodelphis domestica]
Length = 385
Score = 198 bits (503), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 117/301 (38%), Positives = 174/301 (57%), Gaps = 35/301 (11%)
Query: 57 RSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRRSAAMAILSL 114
R++YVGN+ VTE L+ ++FS GP + CK+I + S+ Y F+ +++ R AA A+ ++
Sbjct: 8 RTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSNDPYCFVEFYEHRDAAAALAAM 67
Query: 115 NGRHLFGQPIKVNWAYA-SGQREDTSG--------------HFNIFVGDLSPEVTDATLF 159
NGR + G+ +KVNWA S Q++DTS HF++FVGDLSPE+T +
Sbjct: 68 NGRKILGKEVKVNWATTPSSQKKDTSSKYIVAITVHLRDQDHFHVFVGDLSPEITTEDIK 127
Query: 160 ACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT 219
+ F+ + SDARV+ D TG+S+G+GFVSF N+ DA++AI + G+WLG RQIR NWAT
Sbjct: 128 SAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWAT 187
Query: 220 KGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDL 279
+ + Q + K + ++ N +P+N TVY G +A +T +
Sbjct: 188 RKPPAPKSTQENSTKQL---------RFEDVVNQSSPKN----CTVYCGGIASGLTDQLM 234
Query: 280 HRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGS 339
+ F G I E+RV +KG+ FVR+STH AA AI N T + G +KC WG
Sbjct: 235 RQTFSPFGQ--IMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTT---IEGHVVKCYWGK 289
Query: 340 K 340
+
Sbjct: 290 E 290
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 105/221 (47%), Gaps = 30/221 (13%)
Query: 136 EDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQD 195
ED ++VG+LS +VT+ + FS C +++ + + + FV F +D
Sbjct: 2 EDDGQPRTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSNDP--YCFVEFYEHRD 59
Query: 196 AQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEA 255
A +A+ + G+ + ++++ NWAT + +D S K +V +T
Sbjct: 60 AAAALAAMNGRKILGKEVKVNWATTPSSQKKDTSS---KYIVAIT--------------V 102
Query: 256 PENNPQYTTVYVGNLAPEVTQLDLHRHFHSLG----AGVIEEVRVQRDKGFGFVRYSTHA 311
+ + V+VG+L+PE+T D+ F G A V++++ + KG+GFV +
Sbjct: 103 HLRDQDHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKL 162
Query: 312 EAALAI-QMGNTTQSSYLFGKQMKCSWGSK--PTPPGTSSN 349
+A AI MG +L G+Q++ +W ++ P P T N
Sbjct: 163 DAENAIVHMG----GQWLGGRQIRTNWATRKPPAPKSTQEN 199
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/197 (19%), Positives = 83/197 (42%), Gaps = 29/197 (14%)
Query: 59 VYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRK----DKSSYGFIHYFDRRSAAMAILSL 114
V+VG++ ++T ++ F+ G + ++++ YGF+ ++++ A AI+ +
Sbjct: 112 VFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHM 171
Query: 115 NGRHLFGQPIKVNWA-------------------YASGQREDTSGHFNIFVGDLSPEVTD 155
G+ L G+ I+ NWA + + + + ++ G ++ +TD
Sbjct: 172 GGQWLGGRQIRTNWATRKPPAPKSTQENSTKQLRFEDVVNQSSPKNCTVYCGGIASGLTD 231
Query: 156 ATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRC 215
+ FS + + RV +G+ FV F + A AI + G + ++C
Sbjct: 232 QLMRQTFSPFGQIMEIRVF------PEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKC 285
Query: 216 NWATKGAGNNEDKQSSD 232
W + ++ Q D
Sbjct: 286 YWGKESPDMTKNFQQVD 302
>gi|195331490|ref|XP_002032434.1| GM23518 [Drosophila sechellia]
gi|194121377|gb|EDW43420.1| GM23518 [Drosophila sechellia]
Length = 464
Score = 198 bits (503), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 114/303 (37%), Positives = 168/303 (55%), Gaps = 22/303 (7%)
Query: 51 FDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKD-KSSYGFIHYFDRRSAAM 109
D S +++YVGN+ T V+E LL +FS+ GPV+ CK+IR+ Y FI Y + ++A+
Sbjct: 1 MDESQPKTLYVGNLDTSVSEDLLIALFSTMGPVKSCKIIREPGNDPYAFIEYSNYQAAST 60
Query: 110 AILSLNGRHLFGQPIKVNWAYASGQ--REDTSGHFNIFVGDLSPEVTDATLFACFSVYPS 167
A+ ++N R + IKVNWA + G + D S H +IFVGDLSPE+ TL F+ +
Sbjct: 61 ALTAMNKRLFLEKEIKVNWATSPGNQPKTDISSHHHIFVGDLSPEIETETLREAFAPFGE 120
Query: 168 CSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATK------- 220
S+ R++ D T +S+G+ FVSF + +A++AI + G+W+GSR IR NW+T+
Sbjct: 121 ISNCRIVRDPHTMKSKGYAFVSFVKKAEAENAIQAMNGQWIGSRSIRTNWSTRKLPPPRE 180
Query: 221 -GAGNNEDKQSSDAKSVVELTNGSSEDG-KETTNTEAPENNPQYTTVYVGNLAPEVTQLD 278
G + GS +E N +P N TTVY G P V D
Sbjct: 181 ASKGGGQGGGMGGGPGNGSGVKGSQRHTFEEVYNQSSPTN----TTVYCGGFPPNVISDD 236
Query: 279 L-HRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSW 337
L H+HF G I++VRV +DKGF F+++ T AA AI+ T +S + G +KC W
Sbjct: 237 LMHKHFVQFGP--IQDVRVFKDKGFSFIKFVTKEAAAHAIEH---THNSEVHGNLVKCFW 291
Query: 338 GSK 340
G +
Sbjct: 292 GKE 294
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/218 (19%), Positives = 82/218 (37%), Gaps = 48/218 (22%)
Query: 49 PGFDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKS----SYGFIHYFDR 104
P D S+ ++VG++ ++ L+E F+ G + C+++R + Y F+ + +
Sbjct: 87 PKTDISSHHHIFVGDLSPEIETETLREAFAPFGEISNCRIVRDPHTMKSKGYAFVSFVKK 146
Query: 105 RSAAMAILSLNGRHLFGQPIKVNWA-----------------------------YASGQR 135
A AI ++NG+ + + I+ NW+ QR
Sbjct: 147 AEAENAIQAMNGQWIGSRSIRTNWSTRKLPPPREASKGGGQGGGMGGGPGNGSGVKGSQR 206
Query: 136 EDTSGHFN--------IFVGDLSPEV-TDATLFACFSVYPSCSDARVMWDQKTGRSRGFG 186
+N ++ G P V +D + F + D RV D +GF
Sbjct: 207 HTFEEVYNQSSPTNTTVYCGGFPPNVISDDLMHKHFVQFGPIQDVRVFKD------KGFS 260
Query: 187 FVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGN 224
F+ F ++ A AI + ++C W + G+
Sbjct: 261 FIKFVTKEAAAHAIEHTHNSEVHGNLVKCFWGKENGGD 298
>gi|387017378|gb|AFJ50807.1| Nucleolysin TIA-1 isoform p40 [Crotalus adamanteus]
Length = 392
Score = 198 bits (503), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 125/320 (39%), Positives = 181/320 (56%), Gaps = 43/320 (13%)
Query: 57 RSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRRSAAMAILSL 114
+++YVGN+ VTE L+ ++FS GP + CK+I + Y F+ +++ R AA A+ ++
Sbjct: 7 KTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFYEHRHAAAALAAM 66
Query: 115 NGRHLFGQPIKVNWAYA-SGQREDTSG-----------HFNIFVGDLSPEVTDATLFACF 162
NGR + G+ +KVNWA S Q++DTS HF++FVGDLSPE+T + A F
Sbjct: 67 NGRKIMGKEVKVNWATTPSSQKKDTSSSTVVNTLRSQDHFHVFVGDLSPEITTEDIKAAF 126
Query: 163 SVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGA 222
+ + SDARV+ D TG+S+G+GFVSF N+ DA++AI + G+WLG RQIR NWAT+
Sbjct: 127 APFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKP 186
Query: 223 GNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRH 282
+ S+AK + S +D N +P N TVY G + +T+ + +
Sbjct: 187 PAPKSTYESNAKQL------SYDD---VVNQSSPSN----CTVYCGGVTSGLTEQLMRQT 233
Query: 283 FHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSKPT 342
F G I E+RV DKG+ FVR+++H AA AI N T + G +KC WG K T
Sbjct: 234 FSPFGQ--IMEIRVFPDKGYSFVRFNSHESAAHAIVSVNGTT---IEGHVVKCYWG-KET 287
Query: 343 PPGTSSNPL--------PPP 354
P NP+ PPP
Sbjct: 288 PDMI--NPIQQQNQVGYPPP 305
>gi|195110141|ref|XP_001999640.1| GI22960 [Drosophila mojavensis]
gi|193916234|gb|EDW15101.1| GI22960 [Drosophila mojavensis]
Length = 475
Score = 197 bits (502), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 110/306 (35%), Positives = 167/306 (54%), Gaps = 25/306 (8%)
Query: 51 FDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRK-DKSSYGFIHYFDRRSAAM 109
D S +++YVGN+ + V+E LL +F GPV+ CK+IR+ Y FI Y + ++A+
Sbjct: 1 MDESQPKTLYVGNLDSSVSEDLLIALFGKMGPVKSCKIIREPGNDPYAFIEYSNYQAAST 60
Query: 110 AILSLNGRHLFGQPIKVNWAYASGQ--REDTSGHFNIFVGDLSPEVTDATLFACFSVYPS 167
A+ ++N R + IKVNWA + G + D S H +IFVGDLSPE+ TL F+ +
Sbjct: 61 ALTAMNKRVFLDKEIKVNWATSPGNTPKTDISSHHHIFVGDLSPEIETETLREAFAPFGE 120
Query: 168 CSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNED 227
S+ R++ D T +S+G+ FVSF + +A++AI + G+W+GSR IR NW+T+ +
Sbjct: 121 ISNCRIVRDPHTMKSKGYAFVSFVKKAEAENAIQSMNGQWIGSRNIRTNWSTRKLPPPRE 180
Query: 228 KQSS------------DAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVT 275
S + + N +E N +P N TTVY G P V
Sbjct: 181 SSKSGGQGGGMGGMGGGGGAGNGIKNNQRHTFEEVYNQSSPTN----TTVYCGGFPPNVI 236
Query: 276 QLDL-HRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMK 334
+L H+HF G I++VRV +DKGF F+++ T AA AI+ T +S + G +K
Sbjct: 237 SDELMHKHFMQFGP--IQDVRVFKDKGFAFIKFVTKEAAARAIEH---THNSEVHGNHVK 291
Query: 335 CSWGSK 340
C WG +
Sbjct: 292 CFWGKE 297
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/221 (19%), Positives = 83/221 (37%), Gaps = 51/221 (23%)
Query: 49 PGFDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKS----SYGFIHYFDR 104
P D S+ ++VG++ ++ L+E F+ G + C+++R + Y F+ + +
Sbjct: 87 PKTDISSHHHIFVGDLSPEIETETLREAFAPFGEISNCRIVRDPHTMKSKGYAFVSFVKK 146
Query: 105 RSAAMAILSLNGRHLFGQPIKVNWA--------------------------------YAS 132
A AI S+NG+ + + I+ NW+ +
Sbjct: 147 AEAENAIQSMNGQWIGSRNIRTNWSTRKLPPPRESSKSGGQGGGMGGMGGGGGAGNGIKN 206
Query: 133 GQREDTSGHFN--------IFVGDLSPEV-TDATLFACFSVYPSCSDARVMWDQKTGRSR 183
QR +N ++ G P V +D + F + D RV D +
Sbjct: 207 NQRHTFEEVYNQSSPTNTTVYCGGFPPNVISDELMHKHFMQFGPIQDVRVFKD------K 260
Query: 184 GFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGN 224
GF F+ F ++ A AI + ++C W + G+
Sbjct: 261 GFAFIKFVTKEAAARAIEHTHNSEVHGNHVKCFWGKENGGD 301
>gi|281338083|gb|EFB13667.1| hypothetical protein PANDA_003438 [Ailuropoda melanoleuca]
Length = 340
Score = 197 bits (502), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 118/301 (39%), Positives = 173/301 (57%), Gaps = 38/301 (12%)
Query: 60 YVGNIHTQVTEPLLQEVFSSTGPVEGCKLI------RKDKSS-------------YGFIH 100
YVGN+ VTE L+ ++FS GP + CK+I R+ SS Y F+
Sbjct: 1 YVGNLSRDVTEVLILQLFSQIGPCKSCKMITEQPDSRRVNSSVGFSVLQHTSNDPYCFVE 60
Query: 101 YFDRRSAAMAILSLNGRHLFGQPIKVNWAYA-SGQREDTSGHFNIFVGDLSPEVTDATLF 159
+++ R AA A+ ++NGR + G+ +KVNWA S Q++DTS HF++FVGDLSPE+T +
Sbjct: 61 FYEHRDAAAALAAMNGRKILGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIK 120
Query: 160 ACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT 219
+ F+ + SDARV+ D TG+S+G+GFVSF N+ DA++AI + G+WLG RQIR NWAT
Sbjct: 121 SAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWAT 180
Query: 220 KGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDL 279
+ + Q ++ K + ++ N +P+N TVY G +A +T +
Sbjct: 181 RKPPAPKSTQENNTKQL---------RFEDVVNQSSPKN----CTVYCGGIASGLTDQLM 227
Query: 280 HRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGS 339
+ F G I E+RV +KG+ FVR+STH AA AI N T + G +KC WG
Sbjct: 228 RQTFSPFGQ--IMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTT---IEGHVVKCYWGK 282
Query: 340 K 340
+
Sbjct: 283 E 283
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/204 (21%), Positives = 86/204 (42%), Gaps = 29/204 (14%)
Query: 52 DPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRK----DKSSYGFIHYFDRRSA 107
D S V+VG++ ++T ++ F+ G + ++++ YGF+ ++++ A
Sbjct: 98 DTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDA 157
Query: 108 AMAILSLNGRHLFGQPIKVNWAY------ASGQREDTS-------------GHFNIFVGD 148
AI+ + G+ L G+ I+ NWA S Q +T + ++ G
Sbjct: 158 ENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYCGG 217
Query: 149 LSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWL 208
++ +TD + FS + + RV +G+ FV F + A AI + G +
Sbjct: 218 IASGLTDQLMRQTFSPFGQIMEIRVF------PEKGYSFVRFSTHESAAHAIVSVNGTTI 271
Query: 209 GSRQIRCNWATKGAGNNEDKQSSD 232
++C W + ++ Q D
Sbjct: 272 EGHVVKCYWGKESPDMTKNFQQVD 295
>gi|426223382|ref|XP_004005854.1| PREDICTED: nucleolysin TIA-1 isoform p40 isoform 1 [Ovis aries]
gi|440907815|gb|ELR57912.1| Nucleolysin TIA-1 isoform p40 [Bos grunniens mutus]
Length = 386
Score = 197 bits (501), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 117/298 (39%), Positives = 172/298 (57%), Gaps = 32/298 (10%)
Query: 57 RSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRRSAAMAILSL 114
+++YVGN+ VTE L+ ++FS GP + CK+I + Y F+ +++ R AA A+ ++
Sbjct: 7 KTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFYEHRHAAAALAAM 66
Query: 115 NGRHLFGQPIKVNWAYA-SGQREDTSG-----------HFNIFVGDLSPEVTDATLFACF 162
NGR + G+ +KVNWA S Q++DTS HF++FVGDLSPE+T + A F
Sbjct: 67 NGRKIMGKEVKVNWATTPSSQKKDTSSSTVVSTQRSQDHFHVFVGDLSPEITTEDIKAAF 126
Query: 163 SVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGA 222
+ + SDARV+ D TG+S+G+GFVSF N+ DA++AI + G+WLG RQIR NWAT+
Sbjct: 127 APFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKP 186
Query: 223 GNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRH 282
+ S+ K + S D E N +P N TVY G + +T+ + +
Sbjct: 187 PAPKSTYESNTKQL-------SYD--EVVNQSSPSN----CTVYCGGVTSGLTEQLMRQT 233
Query: 283 FHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSK 340
F G I E+RV DKG+ FVR+++H AA AI N T + G +KC WG +
Sbjct: 234 FSPFGQ--IMEIRVFPDKGYSFVRFNSHESAAHAIVSVNGTT---IEGHVVKCYWGKE 286
>gi|392575524|gb|EIW68657.1| hypothetical protein TREMEDRAFT_71869 [Tremella mesenterica DSM
1558]
Length = 389
Score = 197 bits (501), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 114/310 (36%), Positives = 169/310 (54%), Gaps = 41/310 (13%)
Query: 59 VYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKS------SYGFIHYFDRRSAAMAIL 112
+YVGN+ +VT+ +L E+F+ GPV K+I +D++ +YGF+ Y D RSA AI
Sbjct: 26 LYVGNLSPRVTDYMLTEIFAVAGPVVNAKII-QDRNFQHAGFNYGFVEYIDMRSAEQAIQ 84
Query: 113 SLNGRHLFGQPIKVNWAYASGQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDAR 172
+LNGR +F +K N +EDT H ++FVGDLSPEV D L F + S S+AR
Sbjct: 85 TLNGRKIFDAEVKQN-------KEDTQHHHHVFVGDLSPEVNDDVLAKAFGAFGSMSEAR 137
Query: 173 VMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATK-------GAGNN 225
VMWD +G+SRG+GF+SFR ++DA+ AIN + G+WLGSR IR NWA + GA ++
Sbjct: 138 VMWDMNSGKSRGYGFLSFRKREDAEQAINTMNGEWLGSRAIRVNWANQKTQTGSSGAYSS 197
Query: 226 EDKQSSDAKSVVELTNGSSEDGKETTN---------------TEAPENNPQYTTVYVGNL 270
+ +LT+ + A P T++VGNL
Sbjct: 198 PSYTAPSYGHYPQLTSSPTPAAPIAPLAPVIPGVPPAGGVPAASATPVIPDNCTLFVGNL 257
Query: 271 APEVTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFG 330
P VTQ +L F + G + ++R+Q D+G+ FV+ T A A+ T Q++ + G
Sbjct: 258 GPYVTQAELTPLFQTY--GYVTDIRMQADRGYAFVKLDTSQAAVSAMA---TLQNTMVQG 312
Query: 331 KQMKCSWGSK 340
+ +K WG +
Sbjct: 313 RPLKIQWGRE 322
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 97/223 (43%), Gaps = 51/223 (22%)
Query: 143 NIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSR-GFGFVSFRNQQDAQSAIN 201
+++VG+LSP VTD L F+V +A+++ D+ + +GFV + + + A+ AI
Sbjct: 25 HLYVGNLSPRVTDYMLTEIFAVAGPVVNAKIIQDRNFQHAGFNYGFVEYIDMRSAEQAIQ 84
Query: 202 DLTGKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQ 261
L G+ + +++ N ED Q
Sbjct: 85 TLNGRKIFDAEVKQN--------KEDTQ-------------------------------H 105
Query: 262 YTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRD------KGFGFVRYSTHAEAAL 315
+ V+VG+L+PEV L + F + G+ + E RV D +G+GF+ + +A
Sbjct: 106 HHHVFVGDLSPEVNDDVLAKAFGAFGS--MSEARVMWDMNSGKSRGYGFLSFRKREDAEQ 163
Query: 316 AIQMGNTTQSSYLFGKQMKCSWGSKPTPPGTSSNPLPPPAAAP 358
AI NT +L + ++ +W ++ T G+S P AP
Sbjct: 164 AI---NTMNGEWLGSRAIRVNWANQKTQTGSSGAYSSPSYTAP 203
Score = 38.1 bits (87), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 46/90 (51%), Gaps = 7/90 (7%)
Query: 43 PSGNLPPG----FDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSSYGF 98
P+G +P P C +++VGN+ VT+ L +F + G V ++ + D+ Y F
Sbjct: 233 PAGGVPAASATPVIPDNC-TLFVGNLGPYVTQAELTPLFQTYGYVTDIRM-QADRG-YAF 289
Query: 99 IHYFDRRSAAMAILSLNGRHLFGQPIKVNW 128
+ ++A A+ +L + G+P+K+ W
Sbjct: 290 VKLDTSQAAVSAMATLQNTMVQGRPLKIQW 319
>gi|115497910|ref|NP_001069577.1| nucleolysin TIA-1 isoform p40 [Bos taurus]
gi|111308630|gb|AAI20428.1| TIA1 cytotoxic granule-associated RNA binding protein [Bos taurus]
gi|296482421|tpg|DAA24536.1| TPA: TIA1 cytotoxic granule-associated RNA binding protein [Bos
taurus]
Length = 384
Score = 197 bits (501), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 117/298 (39%), Positives = 172/298 (57%), Gaps = 32/298 (10%)
Query: 57 RSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRRSAAMAILSL 114
+++YVGN+ VTE L+ ++FS GP + CK+I + Y F+ +++ R AA A+ ++
Sbjct: 7 KTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFYEHRHAAAALAAM 66
Query: 115 NGRHLFGQPIKVNWAYA-SGQREDTSG-----------HFNIFVGDLSPEVTDATLFACF 162
NGR + G+ +KVNWA S Q++DTS HF++FVGDLSPE+T + A F
Sbjct: 67 NGRKIMGKEVKVNWATTPSSQKKDTSSSTVVSTQRSQDHFHVFVGDLSPEITTEDIKAAF 126
Query: 163 SVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGA 222
+ + SDARV+ D TG+S+G+GFVSF N+ DA++AI + G+WLG RQIR NWAT+
Sbjct: 127 APFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKP 186
Query: 223 GNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRH 282
+ S+ K + S D E N +P N TVY G + +T+ + +
Sbjct: 187 PAPKSTYESNTKQL-------SYD--EVVNQSSPSN----CTVYCGGVTSGLTEQLMRQT 233
Query: 283 FHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSK 340
F G I E+RV DKG+ FVR+++H AA AI N T + G +KC WG +
Sbjct: 234 FSPFGQ--IMEIRVFPDKGYSFVRFNSHESAAHAIVSVNGTT---IEGHVVKCYWGKE 286
>gi|344283907|ref|XP_003413712.1| PREDICTED: nucleolysin TIA-1 isoform p40 isoform 1 [Loxodonta
africana]
Length = 386
Score = 197 bits (500), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 117/298 (39%), Positives = 172/298 (57%), Gaps = 32/298 (10%)
Query: 57 RSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRRSAAMAILSL 114
+++YVGN+ VTE L+ ++FS GP + CK+I + Y F+ +++ R AA A+ ++
Sbjct: 7 KTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFYEHRHAAAALAAM 66
Query: 115 NGRHLFGQPIKVNWAYA-SGQREDTSG-----------HFNIFVGDLSPEVTDATLFACF 162
NGR + G+ +KVNWA S Q++DTS HF++FVGDLSPE+T + A F
Sbjct: 67 NGRKIMGKEVKVNWATTPSSQKKDTSSSTVVSTQRSQDHFHVFVGDLSPEITTEDIKAAF 126
Query: 163 SVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGA 222
+ + SDARV+ D TG+S+G+GFVSF N+ DA++AI + G+WLG RQIR NWAT+
Sbjct: 127 APFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKP 186
Query: 223 GNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRH 282
+ S+ K + S D E N +P N TVY G + +T+ + +
Sbjct: 187 PAPKSTYESNTKQL-------SYD--EVVNQSSPSN----CTVYCGGVTSGLTEQLMRQT 233
Query: 283 FHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSK 340
F G I E+RV DKG+ FVR+++H AA AI N T + G +KC WG +
Sbjct: 234 FSPFGQ--IMEIRVFPDKGYSFVRFNSHESAAHAIVSVNGTT---IEGHVVKCYWGKE 286
>gi|73969892|ref|XP_866571.1| PREDICTED: nucleolysin TIA-1 isoform p40 isoform 9 [Canis lupus
familiaris]
gi|301758208|ref|XP_002914947.1| PREDICTED: nucleolysin TIA-1 isoform p40-like isoform 1 [Ailuropoda
melanoleuca]
gi|410954995|ref|XP_003984144.1| PREDICTED: nucleolysin TIA-1 isoform p40 isoform 2 [Felis catus]
gi|431912606|gb|ELK14624.1| Nucleolysin TIA-1 isoform p40 [Pteropus alecto]
Length = 386
Score = 197 bits (500), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 117/298 (39%), Positives = 172/298 (57%), Gaps = 32/298 (10%)
Query: 57 RSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRRSAAMAILSL 114
+++YVGN+ VTE L+ ++FS GP + CK+I + Y F+ +++ R AA A+ ++
Sbjct: 7 KTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFYEHRHAAAALAAM 66
Query: 115 NGRHLFGQPIKVNWAYA-SGQREDTSG-----------HFNIFVGDLSPEVTDATLFACF 162
NGR + G+ +KVNWA S Q++DTS HF++FVGDLSPE+T + A F
Sbjct: 67 NGRKIMGKEVKVNWATTPSSQKKDTSSSTVVSTQRSQDHFHVFVGDLSPEITTEDIKAAF 126
Query: 163 SVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGA 222
+ + SDARV+ D TG+S+G+GFVSF N+ DA++AI + G+WLG RQIR NWAT+
Sbjct: 127 APFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKP 186
Query: 223 GNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRH 282
+ S+ K + S D E N +P N TVY G + +T+ + +
Sbjct: 187 PAPKSTYESNTKQL-------SYD--EVVNQSSPSN----CTVYCGGVTSGLTEQLMRQT 233
Query: 283 FHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSK 340
F G I E+RV DKG+ FVR+++H AA AI N T + G +KC WG +
Sbjct: 234 FSPFGQ--IMEIRVFPDKGYSFVRFNSHESAAHAIVSVNGTT---IEGHVVKCYWGKE 286
>gi|387017380|gb|AFJ50808.1| Nucleolysin TIAR [Crotalus adamanteus]
Length = 388
Score = 197 bits (500), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 121/310 (39%), Positives = 176/310 (56%), Gaps = 39/310 (12%)
Query: 57 RSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLI------RKDKSS-------------YG 97
+++YVGN+ VTE L+ ++FS GP + CK+I R+ SS Y
Sbjct: 8 KTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEQPDSRRVNSSVGFSVLQHTSNDPYC 67
Query: 98 FIHYFDRRSAAMAILSLNGRHLFGQPIKVNWAYA-SGQREDTSGHFNIFVGDLSPEVTDA 156
F+ +++ R AA A+ ++NGR + G+ +KVNWA S Q++DTS HF++FVGDLSPE+T
Sbjct: 68 FVEFYEHRDAAAALAAMNGRKILGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTE 127
Query: 157 TLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCN 216
+ + F+ + SDARV+ D TG+S+G+GFVSF N+ DA++AI + G+WLG RQIR N
Sbjct: 128 DIKSAFAPFGKISDARVVKDMTTGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTN 187
Query: 217 WATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQ 276
WAT+ + Q ++ K + ++ N +P+N TVY G +A +T
Sbjct: 188 WATRKPPAPKSTQENNTKQL---------RFEDVVNQSSPKN----CTVYCGGIASGLTD 234
Query: 277 LDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCS 336
+ + F G I E R KG+ FVR+STH AA AI N T + G +KC
Sbjct: 235 QLMRQTFSPFGQ--IVETRAFPVKGYSFVRFSTHESAAHAIVSVNGTT---IEGHVVKCY 289
Query: 337 WGSKPTPPGT 346
WG K TP T
Sbjct: 290 WG-KETPDTT 298
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 104/236 (44%), Gaps = 57/236 (24%)
Query: 136 EDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGR----SRGFG----- 186
ED ++VG+LS +VT+ + FS C +++ +Q R S GF
Sbjct: 2 EDDGQPKTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEQPDSRRVNSSVGFSVLQHT 61
Query: 187 ------FVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELT 240
FV F +DA +A+ + G+ + ++++ NWAT
Sbjct: 62 SNDPYCFVEFYEHRDAAAALAAMNGRKILGKEVKVNWATT-------------------- 101
Query: 241 NGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLG----AGVIEEVRV 296
S K+T+N + V+VG+L+PE+T D+ F G A V++++
Sbjct: 102 --PSSQKKDTSN---------HFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMTT 150
Query: 297 QRDKGFGFVRYSTHAEAALAI-QMGNTTQSSYLFGKQMKCSWGSK--PTPPGTSSN 349
+ KG+GFV + +A AI MG +L G+Q++ +W ++ P P T N
Sbjct: 151 GKSKGYGFVSFYNKLDAENAIVHMG----GQWLGGRQIRTNWATRKPPAPKSTQEN 202
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/201 (20%), Positives = 84/201 (41%), Gaps = 29/201 (14%)
Query: 52 DPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRK----DKSSYGFIHYFDRRSA 107
D S V+VG++ ++T ++ F+ G + ++++ YGF+ ++++ A
Sbjct: 108 DTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMTTGKSKGYGFVSFYNKLDA 167
Query: 108 AMAILSLNGRHLFGQPIKVNWAY------ASGQREDTS-------------GHFNIFVGD 148
AI+ + G+ L G+ I+ NWA S Q +T + ++ G
Sbjct: 168 ENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYCGG 227
Query: 149 LSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWL 208
++ +TD + FS + + R +G+ FV F + A AI + G +
Sbjct: 228 IASGLTDQLMRQTFSPFGQIVETRAF------PVKGYSFVRFSTHESAAHAIVSVNGTTI 281
Query: 209 GSRQIRCNWATKGAGNNEDKQ 229
++C W + +D Q
Sbjct: 282 EGHVVKCYWGKETPDTTKDFQ 302
>gi|157114083|ref|XP_001657973.1| nucleolysin tia-1 [Aedes aegypti]
gi|108877443|gb|EAT41668.1| AAEL006710-PA [Aedes aegypti]
Length = 453
Score = 197 bits (500), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 109/288 (37%), Positives = 168/288 (58%), Gaps = 20/288 (6%)
Query: 57 RSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS-YGFIHYFDRRSAAMAILSLN 115
+++YVGN+ VTE LL +F G V+ CK+IR+ S Y FI Y + +SA A+ ++N
Sbjct: 8 KTLYVGNLDQSVTEDLLCALFGQMGAVKSCKIIREASSDPYAFIEYANHQSAQTALAAMN 67
Query: 116 GRHLFGQPIKVNWAYASGQ--REDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARV 173
R + IKVNWA + G + DTS H +IFVGDLSPE+ TL F+ + S+ R+
Sbjct: 68 KRLFLKKEIKVNWATSPGNQPKTDTSQHHHIFVGDLSPEIETETLREAFAPFGEISNCRI 127
Query: 174 MWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSSDA 233
+ D +T +SRG+ FVSF + +A++AI + G+WLGSR IR NW+T+ K +
Sbjct: 128 VRDPQTLKSRGYAFVSFVKKAEAENAIQMMNGQWLGSRSIRTNWSTR-------KPPAPR 180
Query: 234 KSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNL-APEVTQLDLHRHFHSLGAGVIE 292
+++ + +G + +E N P N TTVY G A + + +H+HF G I+
Sbjct: 181 ENIKGIKSGKTPGFEEIYNNTGPTN----TTVYCGGFPANAINDMLIHKHFGLFGQ--IQ 234
Query: 293 EVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSK 340
+VRV +DKG+ F++++ AA AI+ T +S + G +KC WG +
Sbjct: 235 DVRVFKDKGYAFIKFNNKESAARAIE---GTHNSEIQGYAVKCYWGKE 279
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/201 (20%), Positives = 82/201 (40%), Gaps = 32/201 (15%)
Query: 49 PGFDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKS----SYGFIHYFDR 104
P D S ++VG++ ++ L+E F+ G + C+++R ++ Y F+ + +
Sbjct: 88 PKTDTSQHHHIFVGDLSPEIETETLREAFAPFGEISNCRIVRDPQTLKSRGYAFVSFVKK 147
Query: 105 RSAAMAILSLNGRHLFGQPIKVNWAYAS--GQREDTSG-------------------HFN 143
A AI +NG+ L + I+ NW+ RE+ G +
Sbjct: 148 AEAENAIQMMNGQWLGSRSIRTNWSTRKPPAPRENIKGIKSGKTPGFEEIYNNTGPTNTT 207
Query: 144 IFVGDL-SPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAIND 202
++ G + + D + F ++ D RV D +G+ F+ F N++ A AI
Sbjct: 208 VYCGGFPANAINDMLIHKHFGLFGQIQDVRVFKD------KGYAFIKFNNKESAARAIEG 261
Query: 203 LTGKWLGSRQIRCNWATKGAG 223
+ ++C W + G
Sbjct: 262 THNSEIQGYAVKCYWGKENGG 282
>gi|242021493|ref|XP_002431179.1| nucleolysin TIA-1, putative [Pediculus humanus corporis]
gi|212516428|gb|EEB18441.1| nucleolysin TIA-1, putative [Pediculus humanus corporis]
Length = 403
Score = 197 bits (500), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 105/293 (35%), Positives = 173/293 (59%), Gaps = 23/293 (7%)
Query: 57 RSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRK-DKSSYGFIHYFDRRSAAMAILSLN 115
+++YVGN+ VTE LL +FS G V+GCK+IR+ + Y F+ + + ++A+ A++++N
Sbjct: 10 KTLYVGNLDVSVTEDLLCTLFSQIGSVKGCKIIREPNNDPYAFVEFVNHQAASTALIAMN 69
Query: 116 GRHLFGQPIKVNWAYASGQ--REDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARV 173
RH+ + IKVNWA + G ++DTS H +IFVGDLSPE+ TL F+ + S+ R+
Sbjct: 70 KRHVLEKEIKVNWATSPGNQPKQDTSSHHHIFVGDLSPEIEMHTLREAFAPFGEISNCRI 129
Query: 174 MWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKG--AGNNEDKQSS 231
+ D +T +S+G+ FVSF + +A+SAI+ + G+WLG+R IR NW+T+ E +
Sbjct: 130 VRDPQTLKSKGYAFVSFVKKAEAESAIHAMNGQWLGNRSIRTNWSTRKPPPPRTERSRQG 189
Query: 232 DAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVI 291
+AK+V +E N +P N TVY G + + + + F G I
Sbjct: 190 NAKAV---------SYEEVYNQSSPTN----CTVYCGGFTNGINEDLIEKAFSRF--GTI 234
Query: 292 EEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSKPTPP 344
+++R +DKG+ F+R+ST A AI+ + + + G+Q+KC WG + + P
Sbjct: 235 QDIRSFKDKGYAFIRFSTKEAATHAIEAMHNAE---INGQQVKCFWGKESSDP 284
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/209 (20%), Positives = 88/209 (42%), Gaps = 40/209 (19%)
Query: 49 PGFDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKS----SYGFIHYFDR 104
P D S+ ++VG++ ++ L+E F+ G + C+++R ++ Y F+ + +
Sbjct: 90 PKQDTSSHHHIFVGDLSPEIEMHTLREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKK 149
Query: 105 RSAAMAILSLNGRHLFGQPIKVNW---------------------AYASGQREDTSGHFN 143
A AI ++NG+ L + I+ NW +Y + + +
Sbjct: 150 AEAESAIHAMNGQWLGNRSIRTNWSTRKPPPPRTERSRQGNAKAVSYEEVYNQSSPTNCT 209
Query: 144 IFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDL 203
++ G + + + + FS + + D R D +G+ F+ F ++ A AI +
Sbjct: 210 VYCGGFTNGINEDLIEKAFSRFGTIQDIRSFKD------KGYAFIRFSTKEAATHAIEAM 263
Query: 204 TGKWLGSRQIRCNWATKGAGNNEDKQSSD 232
+ +Q++C W K+SSD
Sbjct: 264 HNAEINGQQVKCFWG---------KESSD 283
>gi|213514260|ref|NP_001133879.1| Nucleolysin TIAR [Salmo salar]
gi|209155676|gb|ACI34070.1| Nucleolysin TIAR [Salmo salar]
Length = 408
Score = 197 bits (500), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 120/319 (37%), Positives = 182/319 (57%), Gaps = 39/319 (12%)
Query: 52 DPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLI------RKDKSS---------- 95
D S +++YVGN+ VTE L+ ++F+ GP + CK+I R+ SS
Sbjct: 3 DESHPKTLYVGNLSRDVTEILILQLFTQIGPCKSCKMITEQPDSRRMNSSVGFSVLQQSS 62
Query: 96 ---YGFIHYFDRRSAAMAILSLNGRHLFGQPIKVNWAYA-SGQREDTSGHFNIFVGDLSP 151
Y F+ +F+ R AA A+ ++NGR + G+ +KVNWA S Q++DTS HF++FVGDLSP
Sbjct: 63 NDPYCFVEFFEHRDAAAALAAMNGRKILGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSP 122
Query: 152 EVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSR 211
E+T + A F+ + SDARV+ D TG+S+G+GFVSF N+ DA++AI + G+WLG R
Sbjct: 123 EITTEDIKAAFAPFGKISDARVVKDMTTGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGR 182
Query: 212 QIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLA 271
QIR NWAT+ ++ Q + +K + ++ N +P+N TVY G +
Sbjct: 183 QIRTNWATRKPPAPKNVQDNGSKQL---------RFEDVVNQSSPQN----CTVYCGGIQ 229
Query: 272 PEVTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGK 331
+++ + + F G I E+RV +KG+ F+R+S+H AA AI N T +
Sbjct: 230 SGLSEHLMRQTFSPFGQ--IMEIRVFPEKGYSFIRFSSHESAAHAIVSVNGTS---IECH 284
Query: 332 QMKCSWGSKPTPPGTSSNP 350
+KC WG K +P S P
Sbjct: 285 IVKCYWG-KESPDIAKSVP 302
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 102/228 (44%), Gaps = 55/228 (24%)
Query: 136 EDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGR----SRGFG----- 186
ED S ++VG+LS +VT+ + F+ C +++ +Q R S GF
Sbjct: 2 EDESHPKTLYVGNLSRDVTEILILQLFTQIGPCKSCKMITEQPDSRRMNSSVGFSVLQQS 61
Query: 187 ------FVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELT 240
FV F +DA +A+ + G+ + ++++ NWAT
Sbjct: 62 SNDPYCFVEFFEHRDAAAALAAMNGRKILGKEVKVNWATT-------------------- 101
Query: 241 NGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLG----AGVIEEVRV 296
S K+T+N + V+VG+L+PE+T D+ F G A V++++
Sbjct: 102 --PSSQKKDTSN---------HFHVFVGDLSPEITTEDIKAAFAPFGKISDARVVKDMTT 150
Query: 297 QRDKGFGFVRYSTHAEAALAI-QMGNTTQSSYLFGKQMKCSWGSKPTP 343
+ KG+GFV + +A AI MG +L G+Q++ +W ++ P
Sbjct: 151 GKSKGYGFVSFYNKLDAENAIVHMG----GQWLGGRQIRTNWATRKPP 194
>gi|297687495|ref|XP_002821248.1| PREDICTED: nucleolysin TIAR isoform 3 [Pongo abelii]
Length = 386
Score = 196 bits (499), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 112/288 (38%), Positives = 170/288 (59%), Gaps = 22/288 (7%)
Query: 57 RSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRRSAAMAILSL 114
R++YVGN+ VTE L+ ++FS GP + CK+I + S+ Y F+ +++ R AA A+ ++
Sbjct: 9 RTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSNDPYCFVEFYEHRDAAAALAAM 68
Query: 115 NGRHLFGQPIKVNWAYASGQREDT--SGHFNIFVGDLSPEVTDATLFACFSVYPSCSDAR 172
NGR + G+ +KVNWA ++ HF++FVGDLSPE+T + + F+ + SDAR
Sbjct: 69 NGRKILGKEVKVNWATTPSSQKKILPVNHFHVFVGDLSPEITTEDIKSAFAPFGKISDAR 128
Query: 173 VMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSSD 232
V+ D TG+S+G+GFVSF N+ DA++AI + G+WLG RQIR NWAT+ + Q ++
Sbjct: 129 VVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQENN 188
Query: 233 AKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIE 292
K + ++ N +P+N TVY G +A +T + + F G I
Sbjct: 189 TKQL---------RFEDVVNQSSPKN----CTVYCGGIASGLTDQLMRQTFSPFGQ--IM 233
Query: 293 EVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSK 340
E+RV +KG+ FVR+STH AA AI N T + G +KC WG +
Sbjct: 234 EIRVFPEKGYSFVRFSTHESAAHAIVSVNGTT---IEGHVVKCYWGKE 278
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 101/221 (45%), Gaps = 43/221 (19%)
Query: 136 EDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQD 195
ED ++VG+LS +VT+ + FS C +++ + + + FV F +D
Sbjct: 3 EDDGQPRTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSNDP--YCFVEFYEHRD 60
Query: 196 AQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEA 255
A +A+ + G+ + ++++ NWAT S K ++
Sbjct: 61 AAAALAAMNGRKILGKEVKVNWATT---------PSSQKKIL------------------ 93
Query: 256 PENNPQYTTVYVGNLAPEVTQLDLHRHFHSLG----AGVIEEVRVQRDKGFGFVRYSTHA 311
P N + V+VG+L+PE+T D+ F G A V++++ + KG+GFV +
Sbjct: 94 PVN---HFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKL 150
Query: 312 EAALAI-QMGNTTQSSYLFGKQMKCSWGSK--PTPPGTSSN 349
+A AI MG +L G+Q++ +W ++ P P T N
Sbjct: 151 DAENAIVHMG----GQWLGGRQIRTNWATRKPPAPKSTQEN 187
>gi|297687491|ref|XP_002821246.1| PREDICTED: nucleolysin TIAR isoform 1 [Pongo abelii]
gi|410976205|ref|XP_003994513.1| PREDICTED: nucleolysin TIAR isoform 1 [Felis catus]
Length = 376
Score = 196 bits (499), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 112/288 (38%), Positives = 170/288 (59%), Gaps = 22/288 (7%)
Query: 57 RSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRRSAAMAILSL 114
R++YVGN+ VTE L+ ++FS GP + CK+I + S+ Y F+ +++ R AA A+ ++
Sbjct: 9 RTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSNDPYCFVEFYEHRDAAAALAAM 68
Query: 115 NGRHLFGQPIKVNWAYASGQREDT--SGHFNIFVGDLSPEVTDATLFACFSVYPSCSDAR 172
NGR + G+ +KVNWA ++ HF++FVGDLSPE+T + + F+ + SDAR
Sbjct: 69 NGRKILGKEVKVNWATTPSSQKKILPVNHFHVFVGDLSPEITTEDIKSAFAPFGKISDAR 128
Query: 173 VMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSSD 232
V+ D TG+S+G+GFVSF N+ DA++AI + G+WLG RQIR NWAT+ + Q ++
Sbjct: 129 VVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQENN 188
Query: 233 AKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIE 292
K + ++ N +P+N TVY G +A +T + + F G I
Sbjct: 189 TKQL---------RFEDVVNQSSPKN----CTVYCGGIASGLTDQLMRQTFSPFGQ--IM 233
Query: 293 EVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSK 340
E+RV +KG+ FVR+STH AA AI N T + G +KC WG +
Sbjct: 234 EIRVFPEKGYSFVRFSTHESAAHAIVSVNGTT---IEGHVVKCYWGKE 278
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 100/221 (45%), Gaps = 43/221 (19%)
Query: 136 EDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQD 195
ED ++VG+LS +VT+ + FS C +++ + + + FV F +D
Sbjct: 3 EDDGQPRTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSNDP--YCFVEFYEHRD 60
Query: 196 AQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEA 255
A +A+ + G+ + ++++ NWAT S K ++ +
Sbjct: 61 AAAALAAMNGRKILGKEVKVNWATT---------PSSQKKILPVN--------------- 96
Query: 256 PENNPQYTTVYVGNLAPEVTQLDLHRHFHSLG----AGVIEEVRVQRDKGFGFVRYSTHA 311
+ V+VG+L+PE+T D+ F G A V++++ + KG+GFV +
Sbjct: 97 ------HFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKL 150
Query: 312 EAALAI-QMGNTTQSSYLFGKQMKCSWGSK--PTPPGTSSN 349
+A AI MG +L G+Q++ +W ++ P P T N
Sbjct: 151 DAENAIVHMG----GQWLGGRQIRTNWATRKPPAPKSTQEN 187
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 41/197 (20%), Positives = 84/197 (42%), Gaps = 29/197 (14%)
Query: 59 VYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRK----DKSSYGFIHYFDRRSAAMAILSL 114
V+VG++ ++T ++ F+ G + ++++ YGF+ ++++ A AI+ +
Sbjct: 100 VFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHM 159
Query: 115 NGRHLFGQPIKVNWAY------ASGQREDTS-------------GHFNIFVGDLSPEVTD 155
G+ L G+ I+ NWA S Q +T + ++ G ++ +TD
Sbjct: 160 GGQWLGGRQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGLTD 219
Query: 156 ATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRC 215
+ FS + + RV +G+ FV F + A AI + G + ++C
Sbjct: 220 QLMRQTFSPFGQIMEIRVF------PEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKC 273
Query: 216 NWATKGAGNNEDKQSSD 232
W + ++ Q D
Sbjct: 274 YWGKESPDMTKNFQQVD 290
>gi|24649513|ref|NP_732942.1| Rox8, isoform B [Drosophila melanogaster]
gi|24649515|ref|NP_732943.1| Rox8, isoform C [Drosophila melanogaster]
gi|7301090|gb|AAF56224.1| Rox8, isoform C [Drosophila melanogaster]
gi|7301091|gb|AAF56225.1| Rox8, isoform B [Drosophila melanogaster]
Length = 464
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 113/303 (37%), Positives = 167/303 (55%), Gaps = 22/303 (7%)
Query: 51 FDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKD-KSSYGFIHYFDRRSAAM 109
D S +++YVGN+ + V+E LL +FS+ GPV+ CK+IR+ Y FI Y + ++A
Sbjct: 1 MDESQPKTLYVGNLDSSVSEDLLIALFSTMGPVKSCKIIREPGNDPYAFIEYSNYQAATT 60
Query: 110 AILSLNGRHLFGQPIKVNWAYASGQ--REDTSGHFNIFVGDLSPEVTDATLFACFSVYPS 167
A+ ++N R + IKVNWA + G + D S H +IFVGDLSPE+ TL F+ +
Sbjct: 61 ALTAMNKRLFLEKEIKVNWATSPGNQPKTDISSHHHIFVGDLSPEIETETLREAFAPFGE 120
Query: 168 CSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATK------- 220
S+ R++ D T +S+G+ FVSF + +A++AI + G+W+GSR IR NW+T+
Sbjct: 121 ISNCRIVRDPHTMKSKGYAFVSFVKKAEAENAIQAMNGQWIGSRSIRTNWSTRKLPPPRE 180
Query: 221 -GAGNNEDKQSSDAKSVVELTNGSSEDG-KETTNTEAPENNPQYTTVYVGNLAPEVTQLD 278
G + GS +E N +P N TTVY G P V D
Sbjct: 181 PSKGGGQGGGMGGGPGNGSGVKGSQRHTFEEVYNQSSPTN----TTVYCGGFPPNVISDD 236
Query: 279 L-HRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSW 337
L H+HF G I++VRV +DKGF F+++ T AA AI+ T +S + G +KC W
Sbjct: 237 LMHKHFVQFGP--IQDVRVFKDKGFSFIKFVTKEAAAHAIEH---THNSEVHGNLVKCFW 291
Query: 338 GSK 340
G +
Sbjct: 292 GKE 294
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/218 (19%), Positives = 82/218 (37%), Gaps = 48/218 (22%)
Query: 49 PGFDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKS----SYGFIHYFDR 104
P D S+ ++VG++ ++ L+E F+ G + C+++R + Y F+ + +
Sbjct: 87 PKTDISSHHHIFVGDLSPEIETETLREAFAPFGEISNCRIVRDPHTMKSKGYAFVSFVKK 146
Query: 105 RSAAMAILSLNGRHLFGQPIKVNWA-----------------------------YASGQR 135
A AI ++NG+ + + I+ NW+ QR
Sbjct: 147 AEAENAIQAMNGQWIGSRSIRTNWSTRKLPPPREPSKGGGQGGGMGGGPGNGSGVKGSQR 206
Query: 136 EDTSGHFN--------IFVGDLSPEV-TDATLFACFSVYPSCSDARVMWDQKTGRSRGFG 186
+N ++ G P V +D + F + D RV D +GF
Sbjct: 207 HTFEEVYNQSSPTNTTVYCGGFPPNVISDDLMHKHFVQFGPIQDVRVFKD------KGFS 260
Query: 187 FVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGN 224
F+ F ++ A AI + ++C W + G+
Sbjct: 261 FIKFVTKEAAAHAIEHTHNSEVHGNLVKCFWGKENGGD 298
>gi|321474916|gb|EFX85880.1| hypothetical protein DAPPUDRAFT_20224 [Daphnia pulex]
Length = 346
Score = 196 bits (498), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 117/293 (39%), Positives = 173/293 (59%), Gaps = 24/293 (8%)
Query: 60 YVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRK-DKSSYGFIHYFDRRSAAMAILSLNGRH 118
YVGN+ VTE L+ +F G V+GCK+I + Y F+ + + SAA A+ ++N R+
Sbjct: 1 YVGNLDPSVTEELIMVLFGQIGTVKGCKIIHEPGHEPYCFVEFAEHHSAAAALAAMNKRN 60
Query: 119 LFGQPIKVNWAYASGQ--REDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWD 176
G+ +KVNWA + G ++DTS HF+IFVGDLSPE+ TL F+ + SD RV+ D
Sbjct: 61 CMGREMKVNWATSPGNAPKQDTSKHFHIFVGDLSPEIETHTLRDAFAAFGEISDCRVVRD 120
Query: 177 QKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSSDAKSV 236
+T +S+G+GFVSF + DA++AI + G+WLG+R IR NWAT+ +D S S
Sbjct: 121 PQTLKSKGYGFVSFVKKSDAENAIAGMNGQWLGTRAIRTNWATRKPPAPKDA-GSKPMSY 179
Query: 237 VELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRV 296
E+ SS +TN TVY GNLA T+ L + F G I+E+RV
Sbjct: 180 EEVFGQSS-----STN----------CTVYCGNLAQGSTEEALQKIFGPYGQ--IQEIRV 222
Query: 297 QRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSKPTPPGTSSN 349
+DKG+ F+R+++ A AI + ++ L G+ +KCSWG +P PG+++N
Sbjct: 223 FKDKGYAFIRFASKESATQAIV---SVHNTDLNGQNVKCSWGKEPGEPGSANN 272
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 91/201 (45%), Gaps = 30/201 (14%)
Query: 49 PGFDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKS----SYGFIHYFDR 104
P D S ++VG++ ++ L++ F++ G + C+++R ++ YGF+ + +
Sbjct: 78 PKQDTSKHFHIFVGDLSPEIETHTLRDAFAAFGEISDCRVVRDPQTLKSKGYGFVSFVKK 137
Query: 105 RSAAMAILSLNGRHLFGQPIKVNWA----------------YASGQREDTSGHFNIFVGD 148
A AI +NG+ L + I+ NWA Y + +S + ++ G+
Sbjct: 138 SDAENAIAGMNGQWLGTRAIRTNWATRKPPAPKDAGSKPMSYEEVFGQSSSTNCTVYCGN 197
Query: 149 LSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWL 208
L+ T+ L F Y + RV D +G+ F+ F +++ A AI + L
Sbjct: 198 LAQGSTEEALQKIFGPYGQIQEIRVFKD------KGYAFIRFASKESATQAIVSVHNTDL 251
Query: 209 GSRQIRCNWATK----GAGNN 225
+ ++C+W + G+ NN
Sbjct: 252 NGQNVKCSWGKEPGEPGSANN 272
>gi|312371659|gb|EFR19788.1| hypothetical protein AND_21810 [Anopheles darlingi]
Length = 440
Score = 196 bits (498), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 110/288 (38%), Positives = 163/288 (56%), Gaps = 20/288 (6%)
Query: 57 RSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS-YGFIHYFDRRSAAMAILSLN 115
+++YVGN+ T VTE LL +FS G V+ CK+IR+ + Y FI Y SA A+ ++N
Sbjct: 8 KTLYVGNLDTSVTEELLCTLFSQMGTVKSCKIIREASNDPYAFIEYASHTSAQTALAAMN 67
Query: 116 GRHLFGQPIKVNWAYASGQ--REDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARV 173
R + IKVNWA + G + DTS H++IFVGDLSPE+ TL F+ + S+ R+
Sbjct: 68 KRFFLKKEIKVNWATSPGNQPKTDTSQHYHIFVGDLSPEIETETLREAFAPFGEISNCRI 127
Query: 174 MWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSSDA 233
+ D +T +SRG+ FVSF + +A++AI + G+WLGSR IR NW+T+ D
Sbjct: 128 VRDPQTLKSRGYAFVSFVKKAEAENAIQMMNGQWLGSRSIRTNWSTRKPPAPRDNSKG-- 185
Query: 234 KSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPE-VTQLDLHRHFHSLGAGVIE 292
+ +G + +E N +P N TTVY G P +T + +HF G I
Sbjct: 186 -----IKSGKTPGFEEIYNNTSPTN----TTVYCGGFPPNTITDELIQKHFAQFGQ--IH 234
Query: 293 EVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSK 340
+ RV +DKG+ F+R++ AA AI+ T +S + G +KC WG +
Sbjct: 235 DTRVFKDKGYAFIRFANKESAARAIE---GTHNSEVQGHPVKCYWGKE 279
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/202 (21%), Positives = 85/202 (42%), Gaps = 32/202 (15%)
Query: 49 PGFDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKS----SYGFIHYFDR 104
P D S ++VG++ ++ L+E F+ G + C+++R ++ Y F+ + +
Sbjct: 88 PKTDTSQHYHIFVGDLSPEIETETLREAFAPFGEISNCRIVRDPQTLKSRGYAFVSFVKK 147
Query: 105 RSAAMAILSLNGRHLFGQPIKVNWAYAS--GQREDTSG-------------------HFN 143
A AI +NG+ L + I+ NW+ R+++ G +
Sbjct: 148 AEAENAIQMMNGQWLGSRSIRTNWSTRKPPAPRDNSKGIKSGKTPGFEEIYNNTSPTNTT 207
Query: 144 IFVGDLSPE-VTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAIND 202
++ G P +TD + F+ + D RV D +G+ F+ F N++ A AI
Sbjct: 208 VYCGGFPPNTITDELIQKHFAQFGQIHDTRVFKD------KGYAFIRFANKESAARAIEG 261
Query: 203 LTGKWLGSRQIRCNWATKGAGN 224
+ ++C W + G+
Sbjct: 262 THNSEVQGHPVKCYWGKENGGD 283
>gi|24649519|ref|NP_732945.1| Rox8, isoform D [Drosophila melanogaster]
gi|442620772|ref|NP_732944.2| Rox8, isoform E [Drosophila melanogaster]
gi|442620774|ref|NP_001262897.1| Rox8, isoform G [Drosophila melanogaster]
gi|442620776|ref|NP_001262898.1| Rox8, isoform H [Drosophila melanogaster]
gi|23172126|gb|AAN13978.1| Rox8, isoform D [Drosophila melanogaster]
gi|211938549|gb|ACJ13171.1| FI04408p [Drosophila melanogaster]
gi|440217818|gb|AAN13977.2| Rox8, isoform E [Drosophila melanogaster]
gi|440217819|gb|AGB96277.1| Rox8, isoform G [Drosophila melanogaster]
gi|440217820|gb|AGB96278.1| Rox8, isoform H [Drosophila melanogaster]
Length = 470
Score = 196 bits (498), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 113/303 (37%), Positives = 167/303 (55%), Gaps = 22/303 (7%)
Query: 51 FDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKD-KSSYGFIHYFDRRSAAM 109
D S +++YVGN+ + V+E LL +FS+ GPV+ CK+IR+ Y FI Y + ++A
Sbjct: 1 MDESQPKTLYVGNLDSSVSEDLLIALFSTMGPVKSCKIIREPGNDPYAFIEYSNYQAATT 60
Query: 110 AILSLNGRHLFGQPIKVNWAYASGQ--REDTSGHFNIFVGDLSPEVTDATLFACFSVYPS 167
A+ ++N R + IKVNWA + G + D S H +IFVGDLSPE+ TL F+ +
Sbjct: 61 ALTAMNKRLFLEKEIKVNWATSPGNQPKTDISSHHHIFVGDLSPEIETETLREAFAPFGE 120
Query: 168 CSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATK------- 220
S+ R++ D T +S+G+ FVSF + +A++AI + G+W+GSR IR NW+T+
Sbjct: 121 ISNCRIVRDPHTMKSKGYAFVSFVKKAEAENAIQAMNGQWIGSRSIRTNWSTRKLPPPRE 180
Query: 221 -GAGNNEDKQSSDAKSVVELTNGSSEDG-KETTNTEAPENNPQYTTVYVGNLAPEVTQLD 278
G + GS +E N +P N TTVY G P V D
Sbjct: 181 PSKGGGQGGGMGGGPGNGSGVKGSQRHTFEEVYNQSSPTN----TTVYCGGFPPNVISDD 236
Query: 279 L-HRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSW 337
L H+HF G I++VRV +DKGF F+++ T AA AI+ T +S + G +KC W
Sbjct: 237 LMHKHFVQFGP--IQDVRVFKDKGFSFIKFVTKEAAAHAIEH---THNSEVHGNLVKCFW 291
Query: 338 GSK 340
G +
Sbjct: 292 GKE 294
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/218 (19%), Positives = 82/218 (37%), Gaps = 48/218 (22%)
Query: 49 PGFDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKS----SYGFIHYFDR 104
P D S+ ++VG++ ++ L+E F+ G + C+++R + Y F+ + +
Sbjct: 87 PKTDISSHHHIFVGDLSPEIETETLREAFAPFGEISNCRIVRDPHTMKSKGYAFVSFVKK 146
Query: 105 RSAAMAILSLNGRHLFGQPIKVNWA-----------------------------YASGQR 135
A AI ++NG+ + + I+ NW+ QR
Sbjct: 147 AEAENAIQAMNGQWIGSRSIRTNWSTRKLPPPREPSKGGGQGGGMGGGPGNGSGVKGSQR 206
Query: 136 EDTSGHFN--------IFVGDLSPEV-TDATLFACFSVYPSCSDARVMWDQKTGRSRGFG 186
+N ++ G P V +D + F + D RV D +GF
Sbjct: 207 HTFEEVYNQSSPTNTTVYCGGFPPNVISDDLMHKHFVQFGPIQDVRVFKD------KGFS 260
Query: 187 FVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGN 224
F+ F ++ A AI + ++C W + G+
Sbjct: 261 FIKFVTKEAAAHAIEHTHNSEVHGNLVKCFWGKENGGD 298
>gi|17944383|gb|AAL48083.1| RE71384p [Drosophila melanogaster]
Length = 470
Score = 196 bits (497), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 113/303 (37%), Positives = 167/303 (55%), Gaps = 22/303 (7%)
Query: 51 FDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKD-KSSYGFIHYFDRRSAAM 109
D S +++YVGN+ + V+E LL +FS+ GPV+ CK+IR+ Y FI Y + ++A
Sbjct: 1 MDESQPKTLYVGNLDSSVSEDLLIALFSTMGPVKSCKIIREPGNDPYAFIEYSNYQAATT 60
Query: 110 AILSLNGRHLFGQPIKVNWAYASGQ--REDTSGHFNIFVGDLSPEVTDATLFACFSVYPS 167
A+ ++N R + IKVNWA + G + D S H +IFVGDLSPE+ TL F+ +
Sbjct: 61 ALTAMNKRLFLEKEIKVNWATSPGNQPKTDISSHHHIFVGDLSPEIETETLREAFAPFGE 120
Query: 168 CSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATK------- 220
S+ R++ D T +S+G+ FVSF + +A++AI + G+W+GSR IR NW+T+
Sbjct: 121 ISNCRIVRDPHTMKSKGYAFVSFVKKAEAENAIQAMNGQWIGSRSIRTNWSTRKLPPPRE 180
Query: 221 -GAGNNEDKQSSDAKSVVELTNGSSEDG-KETTNTEAPENNPQYTTVYVGNLAPEVTQLD 278
G + GS +E N +P N TTVY G P V D
Sbjct: 181 PSKGGGQGGGMGGGPGNGSGVKGSQRHTFEEVYNQSSPTN----TTVYCGGFPPNVISDD 236
Query: 279 L-HRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSW 337
L H+HF G I++VRV +DKGF F+++ T AA AI+ T +S + G +KC W
Sbjct: 237 LMHKHFVQFGP--IQDVRVFKDKGFSFIKFVTKEAAAHAIEH---THNSEVHGNLVKCFW 291
Query: 338 GSK 340
G +
Sbjct: 292 GKE 294
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/218 (19%), Positives = 82/218 (37%), Gaps = 48/218 (22%)
Query: 49 PGFDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKS----SYGFIHYFDR 104
P D S+ ++VG++ ++ L+E F+ G + C+++R + Y F+ + +
Sbjct: 87 PKTDISSHHHIFVGDLSPEIETETLREAFAPFGEISNCRIVRDPHTMKSKGYAFVSFVKK 146
Query: 105 RSAAMAILSLNGRHLFGQPIKVNWA-----------------------------YASGQR 135
A AI ++NG+ + + I+ NW+ QR
Sbjct: 147 AEAENAIQAMNGQWIGSRSIRTNWSTRKLPPPREPSKGGGQGGGMGGGPGNGSGVKGSQR 206
Query: 136 EDTSGHFN--------IFVGDLSPEV-TDATLFACFSVYPSCSDARVMWDQKTGRSRGFG 186
+N ++ G P V +D + F + D RV D +GF
Sbjct: 207 HTFEEVYNQSSPTNTTVYCGGFPPNVISDDLMHKHFVQFGPIQDVRVFKD------KGFS 260
Query: 187 FVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGN 224
F+ F ++ A AI + ++C W + G+
Sbjct: 261 FIKFVTKEAAAHAIEHTHNSEVHGNLVKCFWGKENGGD 298
>gi|195445204|ref|XP_002070221.1| GK11939 [Drosophila willistoni]
gi|194166306|gb|EDW81207.1| GK11939 [Drosophila willistoni]
Length = 469
Score = 196 bits (497), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 111/304 (36%), Positives = 165/304 (54%), Gaps = 23/304 (7%)
Query: 51 FDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRK-DKSSYGFIHYFDRRSAAM 109
D S +++YVGN+ V+E LL +F GPV+ CK+IR+ Y FI Y + ++A
Sbjct: 1 MDESQPKTLYVGNLDGSVSEDLLIALFGKMGPVKSCKIIREPGNDPYAFIEYSNYQAATT 60
Query: 110 AILSLNGRHLFGQPIKVNWAYASGQ--REDTSGHFNIFVGDLSPEVTDATLFACFSVYPS 167
A+ ++N R + IKVNWA + G + D S H +IFVGDLSPE+ TL F+ +
Sbjct: 61 ALTAMNKRVFLEKEIKVNWATSPGNQPKTDISSHHHIFVGDLSPEIETETLREAFAPFGE 120
Query: 168 CSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNW---------- 217
S+ R++ D +T +S+G+ FVSF + +A++AI + G+W+GSR IR NW
Sbjct: 121 ISNCRIVRDPQTMKSKGYAFVSFVKKAEAENAIQAMNGQWIGSRSIRTNWSTRKLPPPRE 180
Query: 218 ATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQL 277
+TK G + + + +E N +P N TTVY G P V
Sbjct: 181 STKAGGQGGGMGGGGPGNGTGIKSNQRHTFEEVYNQSSPTN----TTVYCGGFPPNVISD 236
Query: 278 DL-HRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCS 336
DL H+HF G I++VRV ++KGF F+++ T AA AI+ T S + G Q+KC
Sbjct: 237 DLMHKHFMQFGP--IQDVRVFKEKGFAFIKFVTKEAAARAIEH---THISEVHGSQVKCF 291
Query: 337 WGSK 340
WG +
Sbjct: 292 WGKE 295
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/219 (20%), Positives = 85/219 (38%), Gaps = 49/219 (22%)
Query: 49 PGFDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKS----SYGFIHYFDR 104
P D S+ ++VG++ ++ L+E F+ G + C+++R ++ Y F+ + +
Sbjct: 87 PKTDISSHHHIFVGDLSPEIETETLREAFAPFGEISNCRIVRDPQTMKSKGYAFVSFVKK 146
Query: 105 RSAAMAILSLNGRHLFGQPIKVNWA------------------------------YASGQ 134
A AI ++NG+ + + I+ NW+ S Q
Sbjct: 147 AEAENAIQAMNGQWIGSRSIRTNWSTRKLPPPRESTKAGGQGGGMGGGGPGNGTGIKSNQ 206
Query: 135 REDTSGHFN--------IFVGDLSPEV-TDATLFACFSVYPSCSDARVMWDQKTGRSRGF 185
R +N ++ G P V +D + F + D RV + +GF
Sbjct: 207 RHTFEEVYNQSSPTNTTVYCGGFPPNVISDDLMHKHFMQFGPIQDVRVF------KEKGF 260
Query: 186 GFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGN 224
F+ F ++ A AI + Q++C W + G+
Sbjct: 261 AFIKFVTKEAAARAIEHTHISEVHGSQVKCFWGKENGGD 299
>gi|410298560|gb|JAA27880.1| TIA1 cytotoxic granule-associated RNA binding protein [Pan
troglodytes]
Length = 388
Score = 196 bits (497), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 117/300 (39%), Positives = 173/300 (57%), Gaps = 34/300 (11%)
Query: 57 RSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS----YGFIHYFDRRSAAMAIL 112
+++YVGN+ VTE L+ ++FS GP + CK+I +++ Y F+ + + R AA A+
Sbjct: 7 KTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDVRTAGNDPYCFVEFHEHRHAAAALA 66
Query: 113 SLNGRHLFGQPIKVNWAYA-SGQREDTSG-----------HFNIFVGDLSPEVTDATLFA 160
++NGR + G+ +KVNWA S Q++DTS HF++FVGDLSPE+T + A
Sbjct: 67 AMNGRKIMGKEVKVNWATTPSSQKKDTSSSTVVSTQRSQDHFHVFVGDLSPEITTEDIKA 126
Query: 161 CFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATK 220
F+ + SDARV+ D TG+S+G+GFVSF N+ DA++AI + G+WLG RQIR NWAT+
Sbjct: 127 AFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATR 186
Query: 221 GAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLH 280
+ S+ K + S D E N +P N TVY G + +T+ +
Sbjct: 187 KPPAPKSTYESNTKQL-------SYD--EVVNQSSPSN----CTVYCGGVTSGLTEQLMR 233
Query: 281 RHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSK 340
+ F G I E+RV DKG+ FVR+++H AA AI N T + G +KC WG +
Sbjct: 234 QTFSPFGQ--IMEIRVFPDKGYSFVRFNSHESAAHAIVSVNGTT---IEGHVVKCYWGKE 288
>gi|195573327|ref|XP_002104645.1| GD18328 [Drosophila simulans]
gi|194200572|gb|EDX14148.1| GD18328 [Drosophila simulans]
Length = 824
Score = 195 bits (496), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 112/294 (38%), Positives = 167/294 (56%), Gaps = 26/294 (8%)
Query: 51 FDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRK-DKSSYGFIHYFDRRSAAM 109
D S +++YVGN+ + V+E LL +FS+ GPV+ CK+IR+ Y FI Y + ++A+
Sbjct: 1 MDESQPKTLYVGNLDSSVSEDLLIALFSTMGPVKSCKIIREPGNDPYAFIEYSNYQAAST 60
Query: 110 AILSLNGRHLFGQPIKVNWAYASGQ--REDTSGHFNIFVGDLSPEVTDATLFACFSVYPS 167
A+ ++N R + IKVNWA + G + D S H +IFVGDLSPE+ TL F+ +
Sbjct: 61 ALTAMNKRLFLEKEIKVNWATSPGNQPKTDISSHHHIFVGDLSPEIETETLREAFAPFGE 120
Query: 168 CSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNED 227
S+ R++ D T +S+G+ FVSF + +A++AI + G+W+GSR IR NW+T+
Sbjct: 121 ISNCRIVRDPHTMKSKGYAFVSFVKKAEAENAIQAMNGQWIGSRSIRTNWSTRKLP--PP 178
Query: 228 KQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDL-HRHFHSL 286
++ S E+ N SS P TTVY G P V DL H+HF
Sbjct: 179 REPSKXXXXXEVYNQSS---------------PTNTTVYCGGFPPNVISDDLMHKHFVQF 223
Query: 287 GAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSK 340
G I++VRV +DKGF F+++ T AA AI+ T +S + G +KC WG +
Sbjct: 224 GP--IQDVRVFKDKGFSFIKFVTKEAAAHAIEH---THNSEVHGNLVKCFWGKE 272
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 40/196 (20%), Positives = 80/196 (40%), Gaps = 26/196 (13%)
Query: 49 PGFDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRK----DKSSYGFIHYFDR 104
P D S+ ++VG++ ++ L+E F+ G + C+++R Y F+ + +
Sbjct: 87 PKTDISSHHHIFVGDLSPEIETETLREAFAPFGEISNCRIVRDPHTMKSKGYAFVSFVKK 146
Query: 105 RSAAMAILSLNGRHLFGQPIKVNWA---------------YASGQREDTSGHFNIFVGDL 149
A AI ++NG+ + + I+ NW+ + + + ++ G
Sbjct: 147 AEAENAIQAMNGQWIGSRSIRTNWSTRKLPPPREPSKXXXXXEVYNQSSPTNTTVYCGGF 206
Query: 150 SPEV-TDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWL 208
P V +D + F + D RV D +GF F+ F ++ A AI +
Sbjct: 207 PPNVISDDLMHKHFVQFGPIQDVRVFKD------KGFSFIKFVTKEAAAHAIEHTHNSEV 260
Query: 209 GSRQIRCNWATKGAGN 224
++C W + G+
Sbjct: 261 HGNLVKCFWGKENGGD 276
>gi|387762942|ref|NP_001248687.1| TIA1 cytotoxic granule-associated RNA binding protein [Macaca
mulatta]
gi|84579193|dbj|BAE73030.1| hypothetical protein [Macaca fascicularis]
gi|355565763|gb|EHH22192.1| hypothetical protein EGK_05415 [Macaca mulatta]
gi|355751389|gb|EHH55644.1| hypothetical protein EGM_04890 [Macaca fascicularis]
gi|380816026|gb|AFE79887.1| nucleolysin TIA-1 isoform p40 isoform 2 [Macaca mulatta]
gi|383421173|gb|AFH33800.1| nucleolysin TIA-1 isoform p40 isoform 2 [Macaca mulatta]
gi|384949108|gb|AFI38159.1| nucleolysin TIA-1 isoform p40 isoform 2 [Macaca mulatta]
Length = 386
Score = 195 bits (496), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 117/298 (39%), Positives = 171/298 (57%), Gaps = 32/298 (10%)
Query: 57 RSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRRSAAMAILSL 114
+++YVGN+ VTE L+ ++FS GP + CK+I + Y F+ + + R AA A+ ++
Sbjct: 7 KTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFHEHRHAAAALAAM 66
Query: 115 NGRHLFGQPIKVNWAYA-SGQREDTSG-----------HFNIFVGDLSPEVTDATLFACF 162
NGR + G+ +KVNWA S Q++DTS HF++FVGDLSPE+T + A F
Sbjct: 67 NGRKIMGKEVKVNWATTPSSQKKDTSSSTVVSTQRSQDHFHVFVGDLSPEITTEDIKAAF 126
Query: 163 SVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGA 222
+ + SDARV+ D TG+S+G+GFVSF N+ DA++AI + G+WLG RQIR NWAT+
Sbjct: 127 APFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKP 186
Query: 223 GNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRH 282
+ S+ K + S D E N +P N TVY G + +T+ + +
Sbjct: 187 PAPKSTYESNTKQL-------SYD--EVVNQSSPSN----CTVYCGGVTSGLTEQLMRQT 233
Query: 283 FHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSK 340
F G I E+RV DKG+ FVR+++H AA AI N T + G +KC WG +
Sbjct: 234 FSPFGQ--IMEIRVFPDKGYSFVRFNSHESAAHAIVSVNGTT---IEGHVVKCYWGKE 286
>gi|390474361|ref|XP_003734771.1| PREDICTED: nucleolysin TIA-1 isoform p40 [Callithrix jacchus]
gi|403260486|ref|XP_003922702.1| PREDICTED: nucleolysin TIA-1 isoform p40 isoform 1 [Saimiri
boliviensis boliviensis]
Length = 386
Score = 195 bits (496), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 117/298 (39%), Positives = 171/298 (57%), Gaps = 32/298 (10%)
Query: 57 RSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRRSAAMAILSL 114
+++YVGN+ VTE L+ ++FS GP + CK+I + Y F+ + + R AA A+ ++
Sbjct: 7 KTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFHEHRHAAAALAAM 66
Query: 115 NGRHLFGQPIKVNWAYA-SGQREDTSG-----------HFNIFVGDLSPEVTDATLFACF 162
NGR + G+ +KVNWA S Q++DTS HF++FVGDLSPE+T + A F
Sbjct: 67 NGRKIMGKEVKVNWATTPSSQKKDTSSSTVVSTQRSQDHFHVFVGDLSPEITTEDIKAAF 126
Query: 163 SVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGA 222
+ + SDARV+ D TG+S+G+GFVSF N+ DA++AI + G+WLG RQIR NWAT+
Sbjct: 127 APFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKP 186
Query: 223 GNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRH 282
+ S+ K + S D E N +P N TVY G + +T+ + +
Sbjct: 187 PAPKSTYESNTKQL-------SYD--EVVNQSSPSN----CTVYCGGVTSGLTEQLMRQT 233
Query: 283 FHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSK 340
F G I E+RV DKG+ FVR+++H AA AI N T + G +KC WG +
Sbjct: 234 FSPFGQ--IMEIRVFPDKGYSFVRFNSHESAAHAIVSVNGTT---IEGHVVKCYWGKE 286
>gi|188219591|ref|NP_071505.2| nucleolysin TIA-1 isoform p40 isoform 2 [Homo sapiens]
gi|114577930|ref|XP_001141557.1| PREDICTED: uncharacterized protein LOC459303 isoform 2 [Pan
troglodytes]
gi|397521824|ref|XP_003830986.1| PREDICTED: nucleolysin TIA-1 isoform p40 isoform 1 [Pan paniscus]
gi|206729905|sp|P31483.3|TIA1_HUMAN RecName: Full=Nucleolysin TIA-1 isoform p40; AltName:
Full=RNA-binding protein TIA-1; AltName:
Full=T-cell-restricted intracellular antigen-1;
Short=TIA-1; AltName: Full=p40-TIA-1
gi|62702267|gb|AAX93193.1| unknown [Homo sapiens]
gi|119620230|gb|EAW99824.1| TIA1 cytotoxic granule-associated RNA binding protein, isoform
CRA_b [Homo sapiens]
gi|261861076|dbj|BAI47060.1| TIA1 cytotoxic granule-associated RNA binding protein [synthetic
construct]
gi|410226260|gb|JAA10349.1| TIA1 cytotoxic granule-associated RNA binding protein [Pan
troglodytes]
gi|410254978|gb|JAA15456.1| TIA1 cytotoxic granule-associated RNA binding protein [Pan
troglodytes]
gi|410298556|gb|JAA27878.1| TIA1 cytotoxic granule-associated RNA binding protein [Pan
troglodytes]
gi|410353839|gb|JAA43523.1| TIA1 cytotoxic granule-associated RNA binding protein [Pan
troglodytes]
Length = 386
Score = 195 bits (495), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 117/298 (39%), Positives = 171/298 (57%), Gaps = 32/298 (10%)
Query: 57 RSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRRSAAMAILSL 114
+++YVGN+ VTE L+ ++FS GP + CK+I + Y F+ + + R AA A+ ++
Sbjct: 7 KTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFHEHRHAAAALAAM 66
Query: 115 NGRHLFGQPIKVNWAYA-SGQREDTSG-----------HFNIFVGDLSPEVTDATLFACF 162
NGR + G+ +KVNWA S Q++DTS HF++FVGDLSPE+T + A F
Sbjct: 67 NGRKIMGKEVKVNWATTPSSQKKDTSSSTVVSTQRSQDHFHVFVGDLSPEITTEDIKAAF 126
Query: 163 SVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGA 222
+ + SDARV+ D TG+S+G+GFVSF N+ DA++AI + G+WLG RQIR NWAT+
Sbjct: 127 APFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKP 186
Query: 223 GNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRH 282
+ S+ K + S D E N +P N TVY G + +T+ + +
Sbjct: 187 PAPKSTYESNTKQL-------SYD--EVVNQSSPSN----CTVYCGGVTSGLTEQLMRQT 233
Query: 283 FHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSK 340
F G I E+RV DKG+ FVR+++H AA AI N T + G +KC WG +
Sbjct: 234 FSPFGQ--IMEIRVFPDKGYSFVRFNSHESAAHAIVSVNGTT---IEGHVVKCYWGKE 286
>gi|84579137|dbj|BAE73002.1| hypothetical protein [Macaca fascicularis]
Length = 385
Score = 195 bits (495), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 117/298 (39%), Positives = 171/298 (57%), Gaps = 32/298 (10%)
Query: 57 RSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRRSAAMAILSL 114
+++YVGN+ VTE L+ ++FS GP + CK+I + Y F+ + + R AA A+ ++
Sbjct: 7 KTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFHEHRHAAAALAAM 66
Query: 115 NGRHLFGQPIKVNWAYA-SGQREDTSG-----------HFNIFVGDLSPEVTDATLFACF 162
NGR + G+ +KVNWA S Q++DTS HF++FVGDLSPE+T + A F
Sbjct: 67 NGRKIMGKEVKVNWATTPSSQKKDTSSSTVVSTQRSQDHFHVFVGDLSPEITTEDIKAAF 126
Query: 163 SVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGA 222
+ + SDARV+ D TG+S+G+GFVSF N+ DA++AI + G+WLG RQIR NWAT+
Sbjct: 127 APFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKP 186
Query: 223 GNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRH 282
+ S+ K + S D E N +P N TVY G + +T+ + +
Sbjct: 187 PAPKSTYESNTKQL-------SYD--EVVNQSSPSN----CTVYCGGVTSGLTEQLMRQT 233
Query: 283 FHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSK 340
F G I E+RV DKG+ FVR+++H AA AI N T + G +KC WG +
Sbjct: 234 FSPFGQ--IMEIRVFPDKGYSFVRFNSHESAAHAIVSVNGTT---IEGHVVKCYWGKE 286
>gi|297687497|ref|XP_002821249.1| PREDICTED: nucleolysin TIAR isoform 4 [Pongo abelii]
Length = 396
Score = 195 bits (495), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 113/298 (37%), Positives = 171/298 (57%), Gaps = 32/298 (10%)
Query: 57 RSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRRSAAMAILSL 114
R++YVGN+ VTE L+ ++FS GP + CK+I + S+ Y F+ +++ R AA A+ ++
Sbjct: 9 RTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSNDPYCFVEFYEHRDAAAALAAM 68
Query: 115 NGRHLFGQPIKVNWAYASGQREDT------------SGHFNIFVGDLSPEVTDATLFACF 162
NGR + G+ +KVNWA ++ S HF++FVGDLSPE+T + + F
Sbjct: 69 NGRKILGKEVKVNWATTPSSQKKILPVSTPVPNALISDHFHVFVGDLSPEITTEDIKSAF 128
Query: 163 SVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGA 222
+ + SDARV+ D TG+S+G+GFVSF N+ DA++AI + G+WLG RQIR NWAT+
Sbjct: 129 APFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKP 188
Query: 223 GNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRH 282
+ Q ++ K + ++ N +P+N TVY G +A +T + +
Sbjct: 189 PAPKSTQENNTKQL---------RFEDVVNQSSPKN----CTVYCGGIASGLTDQLMRQT 235
Query: 283 FHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSK 340
F G I E+RV +KG+ FVR+STH AA AI N T + G +KC WG +
Sbjct: 236 FSPFGQ--IMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTT---IEGHVVKCYWGKE 288
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 103/222 (46%), Gaps = 35/222 (15%)
Query: 136 EDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQD 195
ED ++VG+LS +VT+ + FS C +++ + + + FV F +D
Sbjct: 3 EDDGQPRTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSNDP--YCFVEFYEHRD 60
Query: 196 AQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEA 255
A +A+ + G+ + ++++ NWAT S K ++ ++ T
Sbjct: 61 AAAALAAMNGRKILGKEVKVNWATT---------PSSQKKILPVS------------TPV 99
Query: 256 PEN-NPQYTTVYVGNLAPEVTQLDLHRHFHSLG----AGVIEEVRVQRDKGFGFVRYSTH 310
P + V+VG+L+PE+T D+ F G A V++++ + KG+GFV +
Sbjct: 100 PNALISDHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNK 159
Query: 311 AEAALAI-QMGNTTQSSYLFGKQMKCSWGSK--PTPPGTSSN 349
+A AI MG +L G+Q++ +W ++ P P T N
Sbjct: 160 LDAENAIVHMG----GQWLGGRQIRTNWATRKPPAPKSTQEN 197
>gi|281346697|gb|EFB22281.1| hypothetical protein PANDA_002889 [Ailuropoda melanoleuca]
Length = 377
Score = 195 bits (495), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 117/295 (39%), Positives = 169/295 (57%), Gaps = 32/295 (10%)
Query: 60 YVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRRSAAMAILSLNGR 117
YVGN+ VTE L+ ++FS GP + CK+I + Y F+ +++ R AA A+ ++NGR
Sbjct: 1 YVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFYEHRHAAAALAAMNGR 60
Query: 118 HLFGQPIKVNWAYA-SGQREDTSG-----------HFNIFVGDLSPEVTDATLFACFSVY 165
+ G+ +KVNWA S Q++DTS HF++FVGDLSPE+T + A F+ +
Sbjct: 61 KIMGKEVKVNWATTPSSQKKDTSSSTVVSTQRSQDHFHVFVGDLSPEITTEDIKAAFAPF 120
Query: 166 PSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNN 225
SDARV+ D TG+S+G+GFVSF N+ DA++AI + G+WLG RQIR NWAT+
Sbjct: 121 GRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAP 180
Query: 226 EDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHS 285
+ S+ K + S D E N +P N TVY G + +T+ + + F
Sbjct: 181 KSTYESNTKQL-------SYD--EVVNQSSPSN----CTVYCGGVTSGLTEQLMRQTFSP 227
Query: 286 LGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSK 340
G I E+RV DKG+ FVR+++H AA AI N T + G +KC WG +
Sbjct: 228 FGQ--IMEIRVFPDKGYSFVRFNSHESAAHAIVSVNGTT---IEGHVVKCYWGKE 277
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 3/77 (3%)
Query: 53 PSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSSYGFIHYFDRRSAAMAIL 112
PS C +VY G + + +TE L+++ FS G + ++ DK Y F+ + SAA AI+
Sbjct: 202 PSNC-TVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVF-PDK-GYSFVRFNSHESAAHAIV 258
Query: 113 SLNGRHLFGQPIKVNWA 129
S+NG + G +K W
Sbjct: 259 SVNGTTIEGHVVKCYWG 275
>gi|395731713|ref|XP_002811971.2| PREDICTED: LOW QUALITY PROTEIN: nucleolysin TIA-1 isoform p40
[Pongo abelii]
Length = 386
Score = 195 bits (495), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 118/298 (39%), Positives = 171/298 (57%), Gaps = 32/298 (10%)
Query: 57 RSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRRSAAMAILSL 114
+++YVGN+ VTE L+ ++FS GP + CK+I + + Y F+ + D R AA A+ ++
Sbjct: 7 KTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMETAGNDPYCFVEFHDDRHAAAALAAM 66
Query: 115 NGRHLFGQPIKVNWAYA-SGQREDTSG-----------HFNIFVGDLSPEVTDATLFACF 162
NGR G+ +KVNWA S Q++DTS HF++FVGDLSPE+T + A F
Sbjct: 67 NGRKKMGKEVKVNWATTPSSQKKDTSSSTVVSTQRSQDHFHVFVGDLSPEITTEDIKAAF 126
Query: 163 SVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGA 222
+ + SDARV+ D TG+S+G+GFVSF N+ DA++AI + G+WLG RQIR NWAT+
Sbjct: 127 APFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKP 186
Query: 223 GNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRH 282
+ S+ K + S D E N +P N TVY G + +T+ + +
Sbjct: 187 PAPKSTYESNTKQL-------SYD--EVVNQSSPSN----CTVYCGGVTSGLTEQLMRQT 233
Query: 283 FHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSK 340
F G I E+RV DKG+ FVR+++H AA AI N T + G +KC WG +
Sbjct: 234 FSPFGQ--IMEIRVFPDKGYSFVRFNSHESAAHAIVSVNGTT---IEGHVVKCYWGKE 286
>gi|347967649|ref|XP_312633.5| AGAP002335-PA [Anopheles gambiae str. PEST]
gi|333468363|gb|EAA07505.5| AGAP002335-PA [Anopheles gambiae str. PEST]
Length = 458
Score = 195 bits (495), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 108/288 (37%), Positives = 168/288 (58%), Gaps = 20/288 (6%)
Query: 57 RSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDK-SSYGFIHYFDRRSAAMAILSLN 115
+++YVGN+ T VTE LL +FS G V+ CK+IR+ + FI Y + +SA A+ ++N
Sbjct: 8 KTLYVGNLDTSVTEELLCTLFSQMGTVKSCKIIRETSIDPFAFIEYANHQSAQTALAAMN 67
Query: 116 GRHLFGQPIKVNWAYASGQ--REDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARV 173
R + I+VNWA ++G + DTS H +IFVGDLSPE+ TL F+ + S+ R+
Sbjct: 68 KRMFLKKEIRVNWATSAGNQPKTDTSQHHHIFVGDLSPEIDTETLREAFAPFGEISNCRI 127
Query: 174 MWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSSDA 233
+ D +T +SRG+ FVSF + +A++AI + G+WLGSR IR NW+T+ K +
Sbjct: 128 VRDPQTLKSRGYAFVSFVKKAEAENAIAMMNGQWLGSRSIRTNWSTR-------KPPAPR 180
Query: 234 KSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPE-VTQLDLHRHFHSLGAGVIE 292
++ + +G + +E N +P N TTVY G P +T + +HF G I
Sbjct: 181 ENSKGIKSGKTPGFEEIYNNTSPTN----TTVYCGGFPPNAITDELIQKHFAQFGH--IN 234
Query: 293 EVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSK 340
+ RV +DKG+ F+R+++ AA AI+ T +S + G +KC WG +
Sbjct: 235 DTRVFKDKGYAFIRFASKESAARAIE---GTHNSEVQGHPVKCYWGKE 279
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 43/202 (21%), Positives = 86/202 (42%), Gaps = 32/202 (15%)
Query: 49 PGFDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKS----SYGFIHYFDR 104
P D S ++VG++ ++ L+E F+ G + C+++R ++ Y F+ + +
Sbjct: 88 PKTDTSQHHHIFVGDLSPEIDTETLREAFAPFGEISNCRIVRDPQTLKSRGYAFVSFVKK 147
Query: 105 RSAAMAILSLNGRHLFGQPIKVNWAYAS--GQREDTSG-------------------HFN 143
A AI +NG+ L + I+ NW+ RE++ G +
Sbjct: 148 AEAENAIAMMNGQWLGSRSIRTNWSTRKPPAPRENSKGIKSGKTPGFEEIYNNTSPTNTT 207
Query: 144 IFVGDLSPE-VTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAIND 202
++ G P +TD + F+ + +D RV D +G+ F+ F +++ A AI
Sbjct: 208 VYCGGFPPNAITDELIQKHFAQFGHINDTRVFKD------KGYAFIRFASKESAARAIEG 261
Query: 203 LTGKWLGSRQIRCNWATKGAGN 224
+ ++C W + G+
Sbjct: 262 THNSEVQGHPVKCYWGKENGGD 283
>gi|27924240|gb|AAH45086.1| Tia1 protein, partial [Xenopus laevis]
Length = 427
Score = 194 bits (494), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 116/312 (37%), Positives = 177/312 (56%), Gaps = 39/312 (12%)
Query: 57 RSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRK-------------------DKSSYG 97
R++YVGN+ VTE L+ ++FS GP + CK+I + + Y
Sbjct: 46 RTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEQTDGRRVGASVSFPVMPNANNDPYC 105
Query: 98 FIHYFDRRSAAMAILSLNGRHLFGQPIKVNWAYA-SGQREDTSGHFNIFVGDLSPEVTDA 156
F+ +++ R AA A+ ++NGR + G+ +KVNWA S Q++DTS HF++FVGDLSPE+T
Sbjct: 106 FVEFYEHRDAAAALAAMNGRKILGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTE 165
Query: 157 TLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCN 216
+ + F+ + SDARV+ D TG+S+G+GFVSF N+ DA++AI + G+WLG RQIR N
Sbjct: 166 DIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTN 225
Query: 217 WATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQ 276
WAT+ + Q ++ K + ++ N + +N TVY G + +++
Sbjct: 226 WATRKPPAPKSTQENNTKQL---------RFEDVVNQSSSKN----CTVYCGGIGAGLSE 272
Query: 277 LDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCS 336
+ + F G I E+RV +KG+ F+R+STH AA AI N T + G +KC
Sbjct: 273 QLMRQTFGVFGQ--ILEIRVFPEKGYSFIRFSTHDSAAHAIVSVNGTT---IEGHVVKCY 327
Query: 337 WGSKPTPPGTSS 348
WG K TP T +
Sbjct: 328 WG-KETPDMTKN 338
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/204 (20%), Positives = 85/204 (41%), Gaps = 29/204 (14%)
Query: 52 DPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRK----DKSSYGFIHYFDRRSA 107
D S V+VG++ ++T ++ F+ G + ++++ YGF+ ++++ A
Sbjct: 146 DTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDA 205
Query: 108 AMAILSLNGRHLFGQPIKVNWAY------ASGQREDT-------------SGHFNIFVGD 148
AI+ + G+ L G+ I+ NWA S Q +T S + ++ G
Sbjct: 206 ENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSSKNCTVYCGG 265
Query: 149 LSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWL 208
+ +++ + F V+ + RV +G+ F+ F A AI + G +
Sbjct: 266 IGAGLSEQLMRQTFGVFGQILEIRVF------PEKGYSFIRFSTHDSAAHAIVSVNGTTI 319
Query: 209 GSRQIRCNWATKGAGNNEDKQSSD 232
++C W + ++ Q D
Sbjct: 320 EGHVVKCYWGKETPDMTKNFQQVD 343
>gi|194742700|ref|XP_001953839.1| GF17967 [Drosophila ananassae]
gi|190626876|gb|EDV42400.1| GF17967 [Drosophila ananassae]
Length = 471
Score = 194 bits (494), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 113/304 (37%), Positives = 166/304 (54%), Gaps = 23/304 (7%)
Query: 51 FDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRK-DKSSYGFIHYFDRRSAAM 109
D S +++YVGN+ + V+E LL +FS+ G V+ CK+IR+ Y FI Y ++A
Sbjct: 1 MDESQPKTLYVGNLDSSVSEDLLIALFSTMGHVKSCKIIREPGNDPYAFIEYSTYQAATT 60
Query: 110 AILSLNGRHLFGQPIKVNWAYASGQ--REDTSGHFNIFVGDLSPEVTDATLFACFSVYPS 167
A+ ++N R + IKVNWA + G + D S H +IFVGDLSPE+ TL F+ +
Sbjct: 61 ALTAMNKRLFLDKEIKVNWATSPGNQPKTDISSHHHIFVGDLSPEIETETLREAFAPFGE 120
Query: 168 CSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT-------- 219
S+ R++ D T +S+G+ FVSF + +A++AI + G+W+GSR IR NW+T
Sbjct: 121 ISNCRIVRDPHTMKSKGYAFVSFVKKAEAENAITAMNGQWIGSRSIRTNWSTRKLPPPRE 180
Query: 220 --KGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQL 277
KG G + + +E N +P N TTVY G P V
Sbjct: 181 PNKGGGQGGGMGGGPGGNGSGVKGSQRHTFEEVYNQSSPTN----TTVYCGGFPPNVISD 236
Query: 278 DL-HRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCS 336
DL H+HF G I++VRV +DKGF F+++ T AA AI+ T +S + G Q+KC
Sbjct: 237 DLMHKHFVQFGP--IQDVRVFKDKGFAFIKFVTKEAAARAIEH---THNSEVHGNQVKCF 291
Query: 337 WGSK 340
WG +
Sbjct: 292 WGKE 295
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 44/219 (20%), Positives = 83/219 (37%), Gaps = 49/219 (22%)
Query: 49 PGFDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKS----SYGFIHYFDR 104
P D S+ ++VG++ ++ L+E F+ G + C+++R + Y F+ + +
Sbjct: 87 PKTDISSHHHIFVGDLSPEIETETLREAFAPFGEISNCRIVRDPHTMKSKGYAFVSFVKK 146
Query: 105 RSAAMAILSLNGRHLFGQPIKVNWA------------------------------YASGQ 134
A AI ++NG+ + + I+ NW+ Q
Sbjct: 147 AEAENAITAMNGQWIGSRSIRTNWSTRKLPPPREPNKGGGQGGGMGGGPGGNGSGVKGSQ 206
Query: 135 REDTSGHFN--------IFVGDLSPEV-TDATLFACFSVYPSCSDARVMWDQKTGRSRGF 185
R +N ++ G P V +D + F + D RV D +GF
Sbjct: 207 RHTFEEVYNQSSPTNTTVYCGGFPPNVISDDLMHKHFVQFGPIQDVRVFKD------KGF 260
Query: 186 GFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGN 224
F+ F ++ A AI + Q++C W + G+
Sbjct: 261 AFIKFVTKEAAARAIEHTHNSEVHGNQVKCFWGKENGGD 299
>gi|395742091|ref|XP_003777693.1| PREDICTED: nucleolysin TIAR [Pongo abelii]
Length = 386
Score = 194 bits (494), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 113/298 (37%), Positives = 171/298 (57%), Gaps = 32/298 (10%)
Query: 57 RSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRRSAAMAILSL 114
R++YVGN+ VTE L+ ++FS GP + CK+I + S+ Y F+ +++ R AA A+ ++
Sbjct: 9 RTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSNDPYCFVEFYEHRDAAAALAAM 68
Query: 115 NGRHLFGQPIKVNWAYASGQREDT------------SGHFNIFVGDLSPEVTDATLFACF 162
NGR + G+ +KVNWA ++ S HF++FVGDLSPE+T + + F
Sbjct: 69 NGRKILGKEVKVNWATTPSSQKKILPVSTPVPNALISDHFHVFVGDLSPEITTEDIKSAF 128
Query: 163 SVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGA 222
+ + SDARV+ D TG+S+G+GFVSF N+ DA++AI + G+WLG RQIR NWAT+
Sbjct: 129 APFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKP 188
Query: 223 GNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRH 282
+ Q ++ K + ++ N +P+N TVY G +A +T + +
Sbjct: 189 PAPKSTQENNTKQL---------RFEDVVNQSSPKN----CTVYCGGIASGLTDQLMRQT 235
Query: 283 FHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSK 340
F G I E+RV +KG+ FVR+STH AA AI N T + G +KC WG +
Sbjct: 236 FSPFGQ--IMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTT---IEGHVVKCYWGKE 288
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 103/222 (46%), Gaps = 35/222 (15%)
Query: 136 EDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQD 195
ED ++VG+LS +VT+ + FS C +++ + + + FV F +D
Sbjct: 3 EDDGQPRTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSNDP--YCFVEFYEHRD 60
Query: 196 AQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEA 255
A +A+ + G+ + ++++ NWAT S K ++ ++ T
Sbjct: 61 AAAALAAMNGRKILGKEVKVNWATT---------PSSQKKILPVS------------TPV 99
Query: 256 PEN-NPQYTTVYVGNLAPEVTQLDLHRHFHSLG----AGVIEEVRVQRDKGFGFVRYSTH 310
P + V+VG+L+PE+T D+ F G A V++++ + KG+GFV +
Sbjct: 100 PNALISDHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNK 159
Query: 311 AEAALAI-QMGNTTQSSYLFGKQMKCSWGSK--PTPPGTSSN 349
+A AI MG +L G+Q++ +W ++ P P T N
Sbjct: 160 LDAENAIVHMG----GQWLGGRQIRTNWATRKPPAPKSTQEN 197
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/219 (20%), Positives = 91/219 (41%), Gaps = 35/219 (15%)
Query: 37 PQIEPIPSGNLPPGFDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRK----D 92
P P+P+ + F V+VG++ ++T ++ F+ G + ++++
Sbjct: 94 PVSTPVPNALISDHFH------VFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGK 147
Query: 93 KSSYGFIHYFDRRSAAMAILSLNGRHLFGQPIKVNWAY------ASGQREDTS------- 139
YGF+ ++++ A AI+ + G+ L G+ I+ NWA S Q +T
Sbjct: 148 SKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQENNTKQLRFEDV 207
Query: 140 ------GHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQ 193
+ ++ G ++ +TD + FS + + RV +G+ FV F
Sbjct: 208 VNQSSPKNCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVF------PEKGYSFVRFSTH 261
Query: 194 QDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSSD 232
+ A AI + G + ++C W + ++ Q D
Sbjct: 262 ESAAHAIVSVNGTTIEGHVVKCYWGKESPDMTKNFQQVD 300
>gi|6755783|ref|NP_035715.1| nucleolysin TIA-1 isoform 1 [Mus musculus]
gi|1729966|sp|P52912.1|TIA1_MOUSE RecName: Full=Nucleolysin TIA-1; AltName: Full=RNA-binding protein
TIA-1; AltName: Full=T-cell-restricted intracellular
antigen-1; Short=TIA-1
gi|437057|gb|AAA03711.1| TIA [Mus musculus]
gi|1616673|gb|AAC52871.1| RNA binding protein TIA-1 [Mus musculus]
gi|26353510|dbj|BAC40385.1| unnamed protein product [Mus musculus]
gi|74188216|dbj|BAE25782.1| unnamed protein product [Mus musculus]
gi|148666751|gb|EDK99167.1| cytotoxic granule-associated RNA binding protein 1, isoform CRA_a
[Mus musculus]
Length = 386
Score = 194 bits (494), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 117/298 (39%), Positives = 171/298 (57%), Gaps = 32/298 (10%)
Query: 57 RSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRRSAAMAILSL 114
+++YVGN+ VTE L+ ++FS GP + CK+I + Y F+ + + R AA A+ ++
Sbjct: 7 KTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFHEHRHAAAALAAM 66
Query: 115 NGRHLFGQPIKVNWAYA-SGQREDTSG-----------HFNIFVGDLSPEVTDATLFACF 162
NGR + G+ +KVNWA S Q++DTS HF++FVGDLSPE+T + A F
Sbjct: 67 NGRKIMGKEVKVNWATTPSSQKKDTSSSTVVSTQRSQDHFHVFVGDLSPEITTEDIKAAF 126
Query: 163 SVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGA 222
+ + SDARV+ D TG+S+G+GFVSF N+ DA++AI + G+WLG RQIR NWAT+
Sbjct: 127 APFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKP 186
Query: 223 GNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRH 282
+ S+ K + S D E + +P N TVY G + +T+ + +
Sbjct: 187 PAPKSTYESNTKQL-------SYD--EVVSQSSPNN----CTVYCGGVTSGLTEQLMRQT 233
Query: 283 FHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSK 340
F G I E+RV DKG+ FVR+S+H AA AI N T + G +KC WG +
Sbjct: 234 FSPFGQ--IMEIRVFPDKGYSFVRFSSHESAAHAIVSVNGTT---IEGHVVKCYWGKE 286
>gi|194910009|ref|XP_001982056.1| GG12380 [Drosophila erecta]
gi|190656694|gb|EDV53926.1| GG12380 [Drosophila erecta]
Length = 464
Score = 194 bits (494), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 112/303 (36%), Positives = 166/303 (54%), Gaps = 22/303 (7%)
Query: 51 FDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKD-KSSYGFIHYFDRRSAAM 109
D S +++YVGN+ + V+E LL +F + GPV+ CK+IR+ Y FI Y + ++A
Sbjct: 1 MDESQPKTLYVGNLDSSVSEDLLIALFGTMGPVKSCKIIREPGNDPYAFIEYSNYQAATT 60
Query: 110 AILSLNGRHLFGQPIKVNWAYASGQ--REDTSGHFNIFVGDLSPEVTDATLFACFSVYPS 167
A+ ++N R + IKVNWA + G + D S H +IFVGDLSPE+ TL F+ +
Sbjct: 61 ALTAMNKRLFLDKEIKVNWATSPGNQPKTDISSHHHIFVGDLSPEIETETLREAFAPFGE 120
Query: 168 CSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATK------- 220
S+ R++ D T +S+G+ FVSF + +A++AI + G+W+GSR IR NW+T+
Sbjct: 121 ISNCRIVRDPHTMKSKGYAFVSFVKKAEAENAIQAMNGQWIGSRSIRTNWSTRKLPPPRE 180
Query: 221 -GAGNNEDKQSSDAKSVVELTNGSSEDG-KETTNTEAPENNPQYTTVYVGNLAPEVTQLD 278
G + GS +E N +P N TTVY G P V D
Sbjct: 181 PSKGGGQGGGMGGGPGNGSGVKGSQRHTFEEVYNQSSPTN----TTVYCGGFPPNVISDD 236
Query: 279 L-HRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSW 337
L H+HF G I++VRV +DKGF F+++ T AA AI+ T +S + G +KC W
Sbjct: 237 LMHKHFVQFGP--IQDVRVFKDKGFSFIKFVTKEAAAHAIEH---THNSEVHGNLVKCFW 291
Query: 338 GSK 340
G +
Sbjct: 292 GKE 294
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/218 (19%), Positives = 82/218 (37%), Gaps = 48/218 (22%)
Query: 49 PGFDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKS----SYGFIHYFDR 104
P D S+ ++VG++ ++ L+E F+ G + C+++R + Y F+ + +
Sbjct: 87 PKTDISSHHHIFVGDLSPEIETETLREAFAPFGEISNCRIVRDPHTMKSKGYAFVSFVKK 146
Query: 105 RSAAMAILSLNGRHLFGQPIKVNWA-----------------------------YASGQR 135
A AI ++NG+ + + I+ NW+ QR
Sbjct: 147 AEAENAIQAMNGQWIGSRSIRTNWSTRKLPPPREPSKGGGQGGGMGGGPGNGSGVKGSQR 206
Query: 136 EDTSGHFN--------IFVGDLSPEV-TDATLFACFSVYPSCSDARVMWDQKTGRSRGFG 186
+N ++ G P V +D + F + D RV D +GF
Sbjct: 207 HTFEEVYNQSSPTNTTVYCGGFPPNVISDDLMHKHFVQFGPIQDVRVFKD------KGFS 260
Query: 187 FVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGN 224
F+ F ++ A AI + ++C W + G+
Sbjct: 261 FIKFVTKEAAAHAIEHTHNSEVHGNLVKCFWGKENGGD 298
>gi|344250807|gb|EGW06911.1| Nucleolysin TIA-1 [Cricetulus griseus]
Length = 387
Score = 194 bits (492), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 116/298 (38%), Positives = 170/298 (57%), Gaps = 32/298 (10%)
Query: 57 RSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRRSAAMAILSL 114
+++YVGN+ VTE L+ ++FS GP + CK+I + Y F+ + + R AA A+ ++
Sbjct: 7 KTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFHEHRHAAAALAAM 66
Query: 115 NGRHLFGQPIKVNWAYA-SGQREDTSG-----------HFNIFVGDLSPEVTDATLFACF 162
NGR + G+ +KVNWA S Q++DTS HF++FVGDLSPE+T + A F
Sbjct: 67 NGRKIMGKEVKVNWATTPSSQKKDTSSSTVVSTQRSQDHFHVFVGDLSPEITTEDIKAAF 126
Query: 163 SVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGA 222
+ + SDARV+ D TG+S+G+GFVSF N+ DA++AI + G+WLG RQIR NWAT
Sbjct: 127 APFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWAT--- 183
Query: 223 GNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRH 282
++ KS EL N E + +P N TVY G + +T+ + +
Sbjct: 184 -----RKPPAPKSTYEL-NTKQLSYDEVVSQSSPSN----CTVYCGGVTSGLTEQLMRQT 233
Query: 283 FHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSK 340
F G I E+RV DKG+ F+R+++H AA AI N T + G +KC WG +
Sbjct: 234 FSPFGQ--ILEIRVFPDKGYSFIRFNSHESAAHAIVSVNGTT---IEGHVVKCYWGKE 286
>gi|195504962|ref|XP_002099304.1| GE10834 [Drosophila yakuba]
gi|194185405|gb|EDW99016.1| GE10834 [Drosophila yakuba]
Length = 464
Score = 194 bits (492), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 112/303 (36%), Positives = 165/303 (54%), Gaps = 22/303 (7%)
Query: 51 FDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKD-KSSYGFIHYFDRRSAAM 109
D S +++YVGN+ + V+E LL +F + GPV+ CK+IR+ Y FI Y + ++A
Sbjct: 1 MDESQPKTLYVGNLDSSVSEDLLIALFGTMGPVKSCKIIREPGNDPYAFIEYSNYQAATT 60
Query: 110 AILSLNGRHLFGQPIKVNWAYASGQ--REDTSGHFNIFVGDLSPEVTDATLFACFSVYPS 167
A+ ++N R + IKVNWA + G + D S H +IFVGDLSPE+ TL F+ +
Sbjct: 61 ALTAMNKRLFLDKEIKVNWATSPGNQPKTDISSHHHIFVGDLSPEIETETLREAFAPFGE 120
Query: 168 CSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATK------- 220
S+ R++ D T +S+G+ FVSF + +A++AI + G+W+GSR IR NW+T+
Sbjct: 121 ISNCRIVRDPHTMKSKGYAFVSFVKKAEAENAIQAMNGQWIGSRSIRTNWSTRKLPPPRE 180
Query: 221 -GAGNNEDKQSSDAKSVVELTNGSSEDG-KETTNTEAPENNPQYTTVYVGNLAPEVTQLD 278
G + GS +E N +P N TTVY G P V D
Sbjct: 181 PSKGGGQGGGMGGGPGNGSGVKGSQRHTFEEVYNQSSPTN----TTVYCGGFPPNVISDD 236
Query: 279 L-HRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSW 337
L H+HF G I +VRV +DKGF F+++ T AA AI+ T +S + G +KC W
Sbjct: 237 LMHKHFVQFGP--IHDVRVFKDKGFSFIKFVTKEAAAHAIEH---THNSEVHGNLVKCFW 291
Query: 338 GSK 340
G +
Sbjct: 292 GKE 294
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/218 (19%), Positives = 82/218 (37%), Gaps = 48/218 (22%)
Query: 49 PGFDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKS----SYGFIHYFDR 104
P D S+ ++VG++ ++ L+E F+ G + C+++R + Y F+ + +
Sbjct: 87 PKTDISSHHHIFVGDLSPEIETETLREAFAPFGEISNCRIVRDPHTMKSKGYAFVSFVKK 146
Query: 105 RSAAMAILSLNGRHLFGQPIKVNWA-----------------------------YASGQR 135
A AI ++NG+ + + I+ NW+ QR
Sbjct: 147 AEAENAIQAMNGQWIGSRSIRTNWSTRKLPPPREPSKGGGQGGGMGGGPGNGSGVKGSQR 206
Query: 136 EDTSGHFN--------IFVGDLSPEV-TDATLFACFSVYPSCSDARVMWDQKTGRSRGFG 186
+N ++ G P V +D + F + D RV D +GF
Sbjct: 207 HTFEEVYNQSSPTNTTVYCGGFPPNVISDDLMHKHFVQFGPIHDVRVFKD------KGFS 260
Query: 187 FVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGN 224
F+ F ++ A AI + ++C W + G+
Sbjct: 261 FIKFVTKEAAAHAIEHTHNSEVHGNLVKCFWGKENGGD 298
>gi|395507384|ref|XP_003758005.1| PREDICTED: nucleolysin TIA-1 isoform p40 [Sarcophilus harrisii]
Length = 394
Score = 193 bits (491), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 116/296 (39%), Positives = 170/296 (57%), Gaps = 32/296 (10%)
Query: 59 VYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRRSAAMAILSLNG 116
+YVGN+ VTE L+ ++FS GP + CK+I + Y F+ +++ R AA A+ ++NG
Sbjct: 8 MYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFYEHRHAAAALAAMNG 67
Query: 117 RHLFGQPIKVNWAYA-SGQREDTSG-----------HFNIFVGDLSPEVTDATLFACFSV 164
R + G+ +KVNWA S Q++DTS HF++FVGDLSPE+T + A F+
Sbjct: 68 RKIMGKEVKVNWATTPSSQKKDTSSSTVVSTLRSQDHFHVFVGDLSPEITTEDIKAAFAP 127
Query: 165 YPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGN 224
+ SDARV+ D TG+S+G+GFVSF N+ DA++AI + G+WLG RQIR NWAT+
Sbjct: 128 FGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPA 187
Query: 225 NEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFH 284
+ S+ K + S +D N +P N TVY G + +T+ + + F
Sbjct: 188 PKSTYESNTKQL------SYDD---VVNQSSPSN----CTVYCGGVTSGLTEQLMRQTFS 234
Query: 285 SLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSK 340
G I E+RV DKG+ FVR+++H AA AI N T + G +KC WG +
Sbjct: 235 PFGQ--IMEIRVFPDKGYSFVRFNSHESAAHAIVSVNGTT---IEGHVVKCYWGKE 285
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 3/77 (3%)
Query: 53 PSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSSYGFIHYFDRRSAAMAIL 112
PS C +VY G + + +TE L+++ FS G + ++ DK Y F+ + SAA AI+
Sbjct: 210 PSNC-TVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVF-PDK-GYSFVRFNSHESAAHAIV 266
Query: 113 SLNGRHLFGQPIKVNWA 129
S+NG + G +K W
Sbjct: 267 SVNGTTIEGHVVKCYWG 283
>gi|322693766|gb|EFY85615.1| TIA1 cytotoxic granule-associated RNA binding protein [Metarhizium
acridum CQMa 102]
Length = 444
Score = 193 bits (491), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 115/294 (39%), Positives = 161/294 (54%), Gaps = 41/294 (13%)
Query: 57 RSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSSYGFIHYFDRRSAAMAILSLNG 116
R++YVG + +VTE +L+++F +TG V+ K+I DK+
Sbjct: 84 RALYVGGLEQRVTEDVLRQIFETTGHVQNVKII-PDKNE--------------------- 121
Query: 117 RHLFGQPIKVNWAYASG--QREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVM 174
I+VNWAY S +EDTS HF+IFVGDLS EV D L FS + + S+ARVM
Sbjct: 122 -------IRVNWAYQSNTSNKEDTSSHFHIFVGDLSNEVNDDILLQAFSAFGTVSEARVM 174
Query: 175 WDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT-KGAGNNEDKQSSDA 233
WD KTGR+RG+GFV+FR++ DA+ A++ + G+WLGSR IRCNWA KG + +Q+ A
Sbjct: 175 WDMKTGRTRGYGFVAFRDRSDAEKALSSMDGEWLGSRAIRCNWANQKGQPSIAQQQAMQA 234
Query: 234 KSVVELT----NGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAG 289
+ T + G + + + TT YVGNL P T D+ F + G
Sbjct: 235 MGLTPTTPFGHHQFPAHGVGSYDVVLNQTPNWQTTCYVGNLTPYTTPNDVVPLFQNF--G 292
Query: 290 VIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSKPTP 343
+ E R Q D+GF F++ TH AA+AI N + G+ +KCSWG TP
Sbjct: 293 FVVESRFQADRGFAFIKMDTHENAAMAICQMNGYN---VNGRPLKCSWGKDKTP 343
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 86/208 (41%), Gaps = 47/208 (22%)
Query: 52 DPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS----YGFIHYFDRRSA 107
D S+ ++VG++ +V + +L + FS+ G V +++ K+ YGF+ + DR A
Sbjct: 137 DTSSHFHIFVGDLSNEVNDDILLQAFSAFGTVSEARVMWDMKTGRTRGYGFVAFRDRSDA 196
Query: 108 AMAILSLNGRHLFGQPIKVNWAYASGQREDTS-------------------------GHF 142
A+ S++G L + I+ NWA GQ G +
Sbjct: 197 EKALSSMDGEWLGSRAIRCNWANQKGQPSIAQQQAMQAMGLTPTTPFGHHQFPAHGVGSY 256
Query: 143 NI------------FVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSF 190
++ +VG+L+P T + F + ++R D RGF F+
Sbjct: 257 DVVLNQTPNWQTTCYVGNLTPYTTPNDVVPLFQNFGFVVESRFQAD------RGFAFIKM 310
Query: 191 RNQQDAQSAINDLTGKWLGSRQIRCNWA 218
++A AI + G + R ++C+W
Sbjct: 311 DTHENAAMAICQMNGYNVNGRPLKCSWG 338
>gi|348566571|ref|XP_003469075.1| PREDICTED: nucleolysin TIA-1 isoform p40-like [Cavia porcellus]
Length = 388
Score = 193 bits (491), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 116/298 (38%), Positives = 171/298 (57%), Gaps = 32/298 (10%)
Query: 57 RSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRRSAAMAILSL 114
+++YVGN+ VTE L+ ++FS GP + CK+I + Y F+ + + R AA A+ ++
Sbjct: 7 KTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFHEHRHAAAALAAM 66
Query: 115 NGRHLFGQPIKVNWAYA-SGQREDTSG-----------HFNIFVGDLSPEVTDATLFACF 162
NGR + G+ +KVNWA S Q++DTS HF++FVGDLSPE+T + A F
Sbjct: 67 NGRKIMGKEVKVNWATTPSSQKKDTSSSTVVSTQRSQDHFHVFVGDLSPEITTEDIKAAF 126
Query: 163 SVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGA 222
+ + SDARV+ D TG+S+G+GFVSF N+ DA++AI + G+WLG RQIR NWAT+
Sbjct: 127 APFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKP 186
Query: 223 GNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRH 282
+ S+ K + S D E + +P N TVY G + +T+ + +
Sbjct: 187 PAPKSTYESNTKQL-------SYD--EVVSQSSPSN----CTVYCGGVTSGLTEQLMRQT 233
Query: 283 FHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSK 340
F G I E+RV DKG+ FVR+++H AA AI N T + G +KC WG +
Sbjct: 234 FSPFGQ--IMEIRVFPDKGYSFVRFNSHESAAHAIVSVNGTT---IEGHVVKCYWGKE 286
>gi|126304035|ref|XP_001381740.1| PREDICTED: nucleolysin TIA-1 isoform p40 [Monodelphis domestica]
Length = 409
Score = 193 bits (491), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 116/295 (39%), Positives = 169/295 (57%), Gaps = 32/295 (10%)
Query: 60 YVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRRSAAMAILSLNGR 117
YVGN+ VTE L+ ++FS GP + CK+I + Y F+ +++ R AA A+ ++NGR
Sbjct: 24 YVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFYEHRHAAAALAAMNGR 83
Query: 118 HLFGQPIKVNWAYA-SGQREDTSG-----------HFNIFVGDLSPEVTDATLFACFSVY 165
+ G+ +KVNWA S Q++DTS HF++FVGDLSPE+T + A F+ +
Sbjct: 84 KIMGKEVKVNWATTPSSQKKDTSSSTVVSTLRSQDHFHVFVGDLSPEITTEDIKAAFAPF 143
Query: 166 PSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNN 225
SDARV+ D TG+S+G+GFVSF N+ DA++AI + G+WLG RQIR NWAT+
Sbjct: 144 GRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAP 203
Query: 226 EDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHS 285
+ S+ K + S +D N +P N TVY G + +T+ + + F
Sbjct: 204 KSTYESNTKQL------SYDD---VVNQSSPSN----CTVYCGGVTSGLTEQLMRQTFSP 250
Query: 286 LGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSK 340
G I E+RV DKG+ FVR+++H AA AI N T + G +KC WG +
Sbjct: 251 FGQ--IMEIRVFPDKGYSFVRFNSHESAAHAIVSVNGTT---IEGHVVKCYWGKE 300
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 3/77 (3%)
Query: 53 PSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSSYGFIHYFDRRSAAMAIL 112
PS C +VY G + + +TE L+++ FS G + ++ DK Y F+ + SAA AI+
Sbjct: 225 PSNC-TVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVF-PDK-GYSFVRFNSHESAAHAIV 281
Query: 113 SLNGRHLFGQPIKVNWA 129
S+NG + G +K W
Sbjct: 282 SVNGTTIEGHVVKCYWG 298
>gi|195400098|ref|XP_002058655.1| GJ14540 [Drosophila virilis]
gi|194142215|gb|EDW58623.1| GJ14540 [Drosophila virilis]
Length = 472
Score = 193 bits (490), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 107/301 (35%), Positives = 168/301 (55%), Gaps = 16/301 (5%)
Query: 51 FDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRK-DKSSYGFIHYFDRRSAAM 109
D S +++YVGN+ V+E LL +F GPV+ CK+IR+ Y FI Y + ++A+
Sbjct: 1 MDESQPKTLYVGNLDGSVSEDLLIALFGKMGPVKSCKIIREPGNDPYAFIEYSNYQAAST 60
Query: 110 AILSLNGRHLFGQPIKVNWAYASGQ--REDTSGHFNIFVGDLSPEVTDATLFACFSVYPS 167
A+ ++N R + IKVNWA + G + D S H +IFVGDLSPE+ TL F+ +
Sbjct: 61 ALTAMNKRVFLDKEIKVNWATSPGNTPKTDISSHHHIFVGDLSPEIETETLREAFAPFGE 120
Query: 168 CSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNED 227
S+ R++ D +T +S+G+ FVSF + +A++AI + G+W+GSR IR NW+T+ +
Sbjct: 121 ISNCRIVRDPQTMKSKGYAFVSFVKKAEAENAIQAMNGQWIGSRSIRTNWSTRKLPPPRE 180
Query: 228 KQSSDAKSVVELTNGSS-------EDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDL- 279
S + G ++ + T +++P TTVY G P V +L
Sbjct: 181 SSKSGGQGGGMGGMGGGGGAGNGIKNQRHTFEEVYNQSSPTNTTVYCGGFPPNVISDELM 240
Query: 280 HRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGS 339
H+HF G I++VRV +DKGF F+++ + AA AI+ T +S + G +KC WG
Sbjct: 241 HKHFMQFGP--IQDVRVFKDKGFAFIKFVSKEAAARAIEH---THNSEVHGNHVKCFWGK 295
Query: 340 K 340
+
Sbjct: 296 E 296
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/220 (19%), Positives = 84/220 (38%), Gaps = 50/220 (22%)
Query: 49 PGFDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKS----SYGFIHYFDR 104
P D S+ ++VG++ ++ L+E F+ G + C+++R ++ Y F+ + +
Sbjct: 87 PKTDISSHHHIFVGDLSPEIETETLREAFAPFGEISNCRIVRDPQTMKSKGYAFVSFVKK 146
Query: 105 RSAAMAILSLNGRHLFGQPIKVNWA-------------------------------YASG 133
A AI ++NG+ + + I+ NW+
Sbjct: 147 AEAENAIQAMNGQWIGSRSIRTNWSTRKLPPPRESSKSGGQGGGMGGMGGGGGAGNGIKN 206
Query: 134 QREDTSGHFN--------IFVGDLSPEV-TDATLFACFSVYPSCSDARVMWDQKTGRSRG 184
QR +N ++ G P V +D + F + D RV D +G
Sbjct: 207 QRHTFEEVYNQSSPTNTTVYCGGFPPNVISDELMHKHFMQFGPIQDVRVFKD------KG 260
Query: 185 FGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGN 224
F F+ F +++ A AI + ++C W + G+
Sbjct: 261 FAFIKFVSKEAAARAIEHTHNSEVHGNHVKCFWGKENGGD 300
>gi|149036617|gb|EDL91235.1| rCG56007, isoform CRA_a [Rattus norvegicus]
Length = 386
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 116/298 (38%), Positives = 171/298 (57%), Gaps = 32/298 (10%)
Query: 57 RSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRRSAAMAILSL 114
+++YVGN+ VTE L+ ++FS GP + CK+I + Y F+ + + R AA A+ ++
Sbjct: 7 KTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFHEHRHAAAALAAM 66
Query: 115 NGRHLFGQPIKVNWAYA-SGQREDTSG-----------HFNIFVGDLSPEVTDATLFACF 162
NGR + G+ +KVNWA S Q++DTS HF++FVGDLSPE+T + A F
Sbjct: 67 NGRKIMGKEVKVNWATTPSSQKKDTSSSTVVSTQRSQDHFHVFVGDLSPEITTEDIKAAF 126
Query: 163 SVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGA 222
+ + SDARV+ D TG+S+G+GFVSF N+ DA++AI + G+WLG RQIR NWAT+
Sbjct: 127 APFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKP 186
Query: 223 GNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRH 282
+ S+ K + S D E + +P N TVY G + +T+ + +
Sbjct: 187 PAPKSTYESNTKQL-------SYD--EVVSQSSPGN----CTVYCGGVTSGLTEQLMRQT 233
Query: 283 FHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSK 340
F G I E+RV DKG+ F+R+S+H AA AI N T + G +KC WG +
Sbjct: 234 FSPFGQ--IMEIRVFPDKGYSFIRFSSHESAAHAIVSVNGTT---IEGHVVKCYWGKE 286
>gi|351714346|gb|EHB17265.1| Nucleolysin TIA-1 isoform p40 [Heterocephalus glaber]
Length = 386
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 116/298 (38%), Positives = 171/298 (57%), Gaps = 32/298 (10%)
Query: 57 RSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRRSAAMAILSL 114
+++YVGN+ VTE L+ ++FS GP + CK+I + Y F+ + + R AA A+ ++
Sbjct: 7 KTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFHEHRHAAAALAAM 66
Query: 115 NGRHLFGQPIKVNWAYA-SGQREDTSG-----------HFNIFVGDLSPEVTDATLFACF 162
NGR + G+ +KVNWA S Q++DTS HF++FVGDLSPE+T + A F
Sbjct: 67 NGRKIMGKEVKVNWATTPSSQKKDTSSSTVVSTQRSQDHFHVFVGDLSPEITTEDIKAAF 126
Query: 163 SVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGA 222
+ + SDARV+ D TG+S+G+GFVSF N+ DA++AI + G+WLG RQIR NWAT+
Sbjct: 127 APFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKP 186
Query: 223 GNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRH 282
+ S+ K + S D E + +P N TVY G + +T+ + +
Sbjct: 187 PAPKSTYESNTKQL-------SYD--EVVSQSSPSN----CTVYCGGVTSGLTEQLMRQT 233
Query: 283 FHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSK 340
F G I E+RV DKG+ FVR+++H AA AI N T + G +KC WG +
Sbjct: 234 FSPFGQ--IMEIRVFPDKGYSFVRFNSHESAAHAIVSVNGTT---IEGHVVKCYWGKE 286
>gi|402891170|ref|XP_003908827.1| PREDICTED: nucleolysin TIA-1 isoform p40, partial [Papio anubis]
Length = 377
Score = 192 bits (489), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 117/295 (39%), Positives = 168/295 (56%), Gaps = 32/295 (10%)
Query: 60 YVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRRSAAMAILSLNGR 117
YVGN+ VTE L+ ++FS GP + CK+I + Y F+ + + R AA A+ ++NGR
Sbjct: 1 YVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFHEHRHAAAALAAMNGR 60
Query: 118 HLFGQPIKVNWAYA-SGQREDTSG-----------HFNIFVGDLSPEVTDATLFACFSVY 165
+ G+ +KVNWA S Q++DTS HF++FVGDLSPE+T + A F+ +
Sbjct: 61 KIMGKEVKVNWATTPSSQKKDTSSSTVVSTQRSQDHFHVFVGDLSPEITTEDIKAAFAPF 120
Query: 166 PSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNN 225
SDARV+ D TG+S+G+GFVSF N+ DA++AI + G+WLG RQIR NWAT+
Sbjct: 121 GRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAP 180
Query: 226 EDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHS 285
+ S+ K + S D E N +P N TVY G + +T+ + + F
Sbjct: 181 KSTYESNTKQL-------SYD--EVVNQSSPSN----CTVYCGGVTSGLTEQLMRQTFSP 227
Query: 286 LGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSK 340
G I E+RV DKG+ FVR+++H AA AI N T + G +KC WG +
Sbjct: 228 FGQ--IMEIRVFPDKGYSFVRFNSHESAAHAIVSVNGTT---IEGHVVKCYWGKE 277
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 3/77 (3%)
Query: 53 PSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSSYGFIHYFDRRSAAMAIL 112
PS C +VY G + + +TE L+++ FS G + ++ DK Y F+ + SAA AI+
Sbjct: 202 PSNC-TVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVF-PDK-GYSFVRFNSHESAAHAIV 258
Query: 113 SLNGRHLFGQPIKVNWA 129
S+NG + G +K W
Sbjct: 259 SVNGTTIEGHVVKCYWG 275
>gi|326924063|ref|XP_003208252.1| PREDICTED: LOW QUALITY PROTEIN: nucleolysin TIAR-like [Meleagris
gallopavo]
Length = 382
Score = 192 bits (489), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 115/292 (39%), Positives = 171/292 (58%), Gaps = 22/292 (7%)
Query: 60 YVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRRSAAMAILSLNGR 117
YVGN+ VTE L+ ++FS GP + CK+I + S+ Y F+ +++ R AA A+ ++NGR
Sbjct: 22 YVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSNDPYCFVEFYEHRDAAAALAAMNGR 81
Query: 118 HLFGQPIKVNWAYA-SGQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWD 176
+ G+ +KVNWA S Q++DTS HF++FVGDLSPE+T + + F+ + SDARV+ D
Sbjct: 82 KILGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKD 141
Query: 177 QKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSSDAKSV 236
TG+S+G+GFVSF N+ DA++AI + G+WLG RQIR + Q ++ K +
Sbjct: 142 MATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRXXXXXXXXPAPKSTQENNTKQL 201
Query: 237 VELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRV 296
++ N +P+N TVY G +A +T + + F G I E+RV
Sbjct: 202 ---------RFEDVVNQSSPKN----CTVYCGGIASGLTDQLMRQTFSPFGQ--IMEIRV 246
Query: 297 QRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSKPTPPGTSS 348
+KG+ FVR+STH AA AI N T + G +KC WG K +P T +
Sbjct: 247 FPEKGYSFVRFSTHESAAHAIVSVNGTT---IEGHVVKCYWG-KESPDMTKN 294
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/204 (20%), Positives = 84/204 (41%), Gaps = 29/204 (14%)
Query: 52 DPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRK----DKSSYGFIHYFDRRSA 107
D S V+VG++ ++T ++ F+ G + ++++ YGF+ ++++ A
Sbjct: 102 DTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDA 161
Query: 108 AMAILSLNGRHLFGQPIKVNW------AYASGQREDTS-------------GHFNIFVGD 148
AI+ + G+ L G+ I+ A S Q +T + ++ G
Sbjct: 162 ENAIVHMGGQWLGGRQIRXXXXXXXXPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYCGG 221
Query: 149 LSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWL 208
++ +TD + FS + + RV +G+ FV F + A AI + G +
Sbjct: 222 IASGLTDQLMRQTFSPFGQIMEIRVF------PEKGYSFVRFSTHESAAHAIVSVNGTTI 275
Query: 209 GSRQIRCNWATKGAGNNEDKQSSD 232
++C W + ++ Q D
Sbjct: 276 EGHVVKCYWGKESPDMTKNFQQVD 299
>gi|91086169|ref|XP_970456.1| PREDICTED: similar to TIA-1 homolog [Tribolium castaneum]
gi|270010230|gb|EFA06678.1| hypothetical protein TcasGA2_TC009608 [Tribolium castaneum]
Length = 364
Score = 192 bits (489), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 104/293 (35%), Positives = 172/293 (58%), Gaps = 22/293 (7%)
Query: 52 DPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRK-DKSSYGFIHYFDRRSAAMA 110
D S +++YVGN+ V+E LL +FS GPV+GCK+IR+ Y F+ + + +SA+ A
Sbjct: 3 DESHPKTLYVGNLDPSVSEDLLCTLFSQIGPVKGCKIIREPGNDPYAFVEFTNHQSASTA 62
Query: 111 ILSLNGRHLFGQPIKVNWAYASGQ--REDTSGHFNIFVGDLSPEVTDATLFACFSVYPSC 168
+ ++N R + +KVNWA + G ++DTS H +IFVGDLSPE+ TL F+ +
Sbjct: 63 LAAMNKRLFLDKEMKVNWATSPGNQPKQDTSNHHHIFVGDLSPEIETETLREAFAPFGEI 122
Query: 169 SDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDK 228
S+ R++ D +T +S+G+ FVSF + +A++AI + G+WLGSR IR NW+T+
Sbjct: 123 SNCRIVRDPQTLKSKGYAFVSFVKKAEAENAIQAMNGQWLGSRSIRTNWSTR-------- 174
Query: 229 QSSDAKSVVELTNGSSEDGKETTNTEA-PENNPQYTTVYVGNLAPEVTQLDLHRHFHSLG 287
K T +++ K+ T E +++P TVY G +T+ + + F
Sbjct: 175 -----KPPPPKTEKAAQRAKQPTFDEVYNQSSPTNCTVYCGGFTTGLTEDLMQKTFSQF- 228
Query: 288 AGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSK 340
GVI+++RV +DKG+ F++++T A AI+ T ++ + G+ +KC WG +
Sbjct: 229 -GVIQDIRVFKDKGYAFIKFATKESATHAIE---TIHNTEINGQMVKCFWGKE 277
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/203 (20%), Positives = 87/203 (42%), Gaps = 30/203 (14%)
Query: 49 PGFDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKS----SYGFIHYFDR 104
P D S ++VG++ ++ L+E F+ G + C+++R ++ Y F+ + +
Sbjct: 88 PKQDTSNHHHIFVGDLSPEIETETLREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKK 147
Query: 105 RSAAMAILSLNGRHLFGQPIKVNWAY---------ASGQR-----------EDTSGHFNI 144
A AI ++NG+ L + I+ NW+ + QR + + + +
Sbjct: 148 AEAENAIQAMNGQWLGSRSIRTNWSTRKPPPPKTEKAAQRAKQPTFDEVYNQSSPTNCTV 207
Query: 145 FVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLT 204
+ G + +T+ + FS + D RV D +G+ F+ F ++ A AI +
Sbjct: 208 YCGGFTTGLTEDLMQKTFSQFGVIQDIRVFKD------KGYAFIKFATKESATHAIETIH 261
Query: 205 GKWLGSRQIRCNWATKGAGNNED 227
+ + ++C W + G D
Sbjct: 262 NTEINGQMVKCFWGKENGGMGAD 284
>gi|26390405|dbj|BAC25892.1| unnamed protein product [Mus musculus]
Length = 358
Score = 192 bits (489), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 113/276 (40%), Positives = 163/276 (59%), Gaps = 21/276 (7%)
Query: 68 VTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRRSAAMAILSLNGRHLFGQPIK 125
VTE L+ ++FS GP + CK+I + Y F+ + + R AA A+ ++NGR + G+ +K
Sbjct: 1 VTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFHEHRHAAAALAAMNGRKIMGKEVK 60
Query: 126 VNWAYA-SGQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRG 184
VNWA S Q++DTS HF++FVGDLSPE+T + A F+ + SDARV+ D TG+S+G
Sbjct: 61 VNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKG 120
Query: 185 FGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSS 244
+GFVSF N+ DA++AI + G+WLG RQIR NWAT+ + S+ K + S
Sbjct: 121 YGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAPKSTYESNTKQL-------S 173
Query: 245 EDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDKGFGF 304
D E + +P N TVY G + +T+ + + F G I E+RV DKG+ F
Sbjct: 174 YD--EVVSQSSPNN----CTVYCGGVTSGLTEQLMRQTFSPFGQ--IMEIRVFPDKGYSF 225
Query: 305 VRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSK 340
VR+S+H AA AI N T + G +KC WG +
Sbjct: 226 VRFSSHESAAHAIVSVNGTT---IEGHVVKCYWGKE 258
Score = 46.6 bits (109), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 43/77 (55%), Gaps = 3/77 (3%)
Query: 53 PSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSSYGFIHYFDRRSAAMAIL 112
P+ C +VY G + + +TE L+++ FS G + ++ DK Y F+ + SAA AI+
Sbjct: 183 PNNC-TVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVF-PDK-GYSFVRFSSHESAAHAIV 239
Query: 113 SLNGRHLFGQPIKVNWA 129
S+NG + G +K W
Sbjct: 240 SVNGTTIEGHVVKCYWG 256
>gi|125775095|ref|XP_001358799.1| GA18869 [Drosophila pseudoobscura pseudoobscura]
gi|195144954|ref|XP_002013461.1| GL24152 [Drosophila persimilis]
gi|54638540|gb|EAL27942.1| GA18869 [Drosophila pseudoobscura pseudoobscura]
gi|194102404|gb|EDW24447.1| GL24152 [Drosophila persimilis]
Length = 464
Score = 192 bits (488), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 106/299 (35%), Positives = 167/299 (55%), Gaps = 14/299 (4%)
Query: 51 FDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRK-DKSSYGFIHYFDRRSAAM 109
D S +++YVGN+ + V+E LL +F + G V+ CK+IR+ Y FI Y + ++A+
Sbjct: 1 MDESQPKTLYVGNLDSSVSEELLIALFGTMGAVKNCKIIREPGNDPYAFIEYSNYQAAST 60
Query: 110 AILSLNGRHLFGQPIKVNWAYASGQ--REDTSGHFNIFVGDLSPEVTDATLFACFSVYPS 167
A+ ++N R + IKVNWA + G + D S H +IFVGDLSPE+ TL F+ +
Sbjct: 61 ALTAMNKRLFLEKEIKVNWATSPGNQPKTDISSHHHIFVGDLSPEIETETLREAFAPFGE 120
Query: 168 CSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKG-----A 222
S+ R++ D +T +S+G+ FVSF + +A++AI + G+W+GSR IR NW+T+
Sbjct: 121 ISNCRIVRDPQTMKSKGYAFVSFVKKAEAENAIQAMNGQWIGSRSIRTNWSTRKLPPPRE 180
Query: 223 GNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDL-HR 281
+ G + + T + +++P TTVY G P V DL H+
Sbjct: 181 SSKGGGLGGGMGGGPGNGGGVKSNQRHTFDEVYNQSSPTNTTVYCGGFPPNVISDDLMHK 240
Query: 282 HFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSK 340
HF G I++VRV +DKGF F+++ T AA AI+ + T+ + G +KC WG +
Sbjct: 241 HFGQFGP--IQDVRVFKDKGFAFIKFVTKDSAAHAIEHTHNTE---VHGNLVKCFWGKE 294
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/218 (20%), Positives = 83/218 (38%), Gaps = 48/218 (22%)
Query: 49 PGFDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKS----SYGFIHYFDR 104
P D S+ ++VG++ ++ L+E F+ G + C+++R ++ Y F+ + +
Sbjct: 87 PKTDISSHHHIFVGDLSPEIETETLREAFAPFGEISNCRIVRDPQTMKSKGYAFVSFVKK 146
Query: 105 RSAAMAILSLNGRHLFGQPIKVNWA-----------------------------YASGQR 135
A AI ++NG+ + + I+ NW+ S QR
Sbjct: 147 AEAENAIQAMNGQWIGSRSIRTNWSTRKLPPPRESSKGGGLGGGMGGGPGNGGGVKSNQR 206
Query: 136 EDTSGHFN--------IFVGDLSPEV-TDATLFACFSVYPSCSDARVMWDQKTGRSRGFG 186
+N ++ G P V +D + F + D RV D +GF
Sbjct: 207 HTFDEVYNQSSPTNTTVYCGGFPPNVISDDLMHKHFGQFGPIQDVRVFKD------KGFA 260
Query: 187 FVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGN 224
F+ F + A AI + ++C W + G+
Sbjct: 261 FIKFVTKDSAAHAIEHTHNTEVHGNLVKCFWGKENGGD 298
>gi|307178104|gb|EFN66931.1| Nucleolysin TIAR [Camponotus floridanus]
Length = 393
Score = 192 bits (488), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 105/290 (36%), Positives = 166/290 (57%), Gaps = 19/290 (6%)
Query: 54 STCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRK-DKSSYGFIHYFDRRSAAMAIL 112
S R++YVGN+ V+E LL +FS G V+GCK+IR+ Y F+ + + +SAA A+
Sbjct: 5 SNPRTLYVGNLDASVSEDLLCALFSQIGAVKGCKIIREPGNDPYAFVEFTNHQSAATALA 64
Query: 113 SLNGRHLFGQPIKVNWAYASGQ--REDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSD 170
++N R + +KVNWA + G + DTS H +IFVGDLSPE+ TL F+ + S+
Sbjct: 65 AMNKRSFLDKEMKVNWATSPGNQPKLDTSNHHHIFVGDLSPEIETQTLKEAFAPFGEISN 124
Query: 171 ARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQS 230
R++ D +T +S+G+ FVSF + +A++AIN + G+WLGSR IR NW+T+ K
Sbjct: 125 CRIVRDPQTLKSKGYAFVSFVKKSEAEAAINAMNGQWLGSRSIRTNWSTR-------KPP 177
Query: 231 SDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGV 290
+N S + +E N +P N TVY G +T + + F G
Sbjct: 178 PPRSERPRHSNNSKPNYEEVYNQSSPTN----CTVYCGGFTNGITDELIKKTFSPF--GT 231
Query: 291 IEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSK 340
I+++RV +DKG+ F++++T A AI+ +T ++ + G +KC WG +
Sbjct: 232 IQDIRVFKDKGYAFIKFTTKEAATHAIE---STHNTEINGSIVKCFWGKE 278
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 41/202 (20%), Positives = 83/202 (41%), Gaps = 31/202 (15%)
Query: 49 PGFDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKS----SYGFIHYFDR 104
P D S ++VG++ ++ L+E F+ G + C+++R ++ Y F+ + +
Sbjct: 88 PKLDTSNHHHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKK 147
Query: 105 RSAAMAILSLNGRHLFGQPIKVNWA---------------------YASGQREDTSGHFN 143
A AI ++NG+ L + I+ NW+ Y + + +
Sbjct: 148 SEAEAAINAMNGQWLGSRSIRTNWSTRKPPPPRSERPRHSNNSKPNYEEVYNQSSPTNCT 207
Query: 144 IFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDL 203
++ G + +TD + FS + + D RV D +G+ F+ F ++ A AI
Sbjct: 208 VYCGGFTNGITDELIKKTFSPFGTIQDIRVFKD------KGYAFIKFTTKEAATHAIEST 261
Query: 204 TGKWLGSRQIRCNWATKGAGNN 225
+ ++C W + N
Sbjct: 262 HNTEINGSIVKCFWGKENGDPN 283
>gi|449488383|ref|XP_002188190.2| PREDICTED: nucleolysin TIA-1-like, partial [Taeniopygia guttata]
Length = 537
Score = 192 bits (488), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 119/303 (39%), Positives = 171/303 (56%), Gaps = 37/303 (12%)
Query: 57 RSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRRSAAMAILSL 114
+++YVGN+ VTE L+ ++FS GP + CK+I + Y F+ + + R AA A+ ++
Sbjct: 7 KTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFSEHRHAAAALAAM 66
Query: 115 NGRHLFGQPIKVNWAYA-SGQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARV 173
NGR + G+ +KVNWA S Q++DTS HF++FVGDLSPE+T + A F+ + SDARV
Sbjct: 67 NGRKIMGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKAAFAPFGRISDARV 126
Query: 174 MWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSSDA 233
+ D TG+S+G+GFVSF N+ DA++AI + G+WLG RQIR NWAT ++
Sbjct: 127 VKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWAT--------RKPPAP 178
Query: 234 KSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEE 293
KS E +G +P+ V ++ P QL + + F G I E
Sbjct: 179 KSTFESRSGPL--------------SPRVPDEAVQSVLPAPEQL-MRQTFSPFGQ--IME 221
Query: 294 VRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSK------PTPPGTS 347
+RV DKG+ FVR+S+H AA AI N T + G +KC WG + P P G
Sbjct: 222 IRVFPDKGYSFVRFSSHESAAHAIVSVNGTT---IEGHVVKCYWGKETADMAGPVPQGQL 278
Query: 348 SNP 350
S P
Sbjct: 279 SYP 281
>gi|332029721|gb|EGI69600.1| Nucleolysin TIAR [Acromyrmex echinatior]
Length = 393
Score = 192 bits (487), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 106/298 (35%), Positives = 169/298 (56%), Gaps = 19/298 (6%)
Query: 52 DPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRK-DKSSYGFIHYFDRRSAAMA 110
+ S R++YVGN+ T V+E LL +FS G V+GCK+IR+ Y F+ + + + AA A
Sbjct: 3 EESNPRTLYVGNLDTSVSEDLLCALFSQIGAVKGCKIIREPGNDPYAFVEFTNHQCAATA 62
Query: 111 ILSLNGRHLFGQPIKVNWAYASGQ--REDTSGHFNIFVGDLSPEVTDATLFACFSVYPSC 168
+ ++N R + +KVNWA + G + DTS H +IFVGDLSPE+ TL F+ +
Sbjct: 63 LAAMNKRSFLDKEMKVNWATSPGNQPKLDTSNHHHIFVGDLSPEIETQTLKEAFAPFGEI 122
Query: 169 SDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDK 228
S+ R++ D +T +S+G+ FVSF + +A++AIN + G+WLGSR IR NW+T+ K
Sbjct: 123 SNCRIVRDPQTLKSKGYAFVSFVKKSEAEAAINAMNGQWLGSRSIRTNWSTR-------K 175
Query: 229 QSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGA 288
+N S + +E N +P N TVY G +T + + F
Sbjct: 176 PPPPRSERPRHSNNSKPNYEEVYNQSSPTN----CTVYCGGFTNGITDELIKKTFSPF-- 229
Query: 289 GVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSKPTPPGT 346
G I+++RV +DKG+ F++++T A AI+ +T ++ + G +KC WG + P +
Sbjct: 230 GTIQDIRVFKDKGYAFIKFTTKEAATHAIE---STHNTEINGSIVKCFWGKENGDPNS 284
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/202 (20%), Positives = 83/202 (41%), Gaps = 31/202 (15%)
Query: 49 PGFDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKS----SYGFIHYFDR 104
P D S ++VG++ ++ L+E F+ G + C+++R ++ Y F+ + +
Sbjct: 88 PKLDTSNHHHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKK 147
Query: 105 RSAAMAILSLNGRHLFGQPIKVNWA---------------------YASGQREDTSGHFN 143
A AI ++NG+ L + I+ NW+ Y + + +
Sbjct: 148 SEAEAAINAMNGQWLGSRSIRTNWSTRKPPPPRSERPRHSNNSKPNYEEVYNQSSPTNCT 207
Query: 144 IFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDL 203
++ G + +TD + FS + + D RV D +G+ F+ F ++ A AI
Sbjct: 208 VYCGGFTNGITDELIKKTFSPFGTIQDIRVFKD------KGYAFIKFTTKEAATHAIEST 261
Query: 204 TGKWLGSRQIRCNWATKGAGNN 225
+ ++C W + N
Sbjct: 262 HNTEINGSIVKCFWGKENGDPN 283
>gi|195037090|ref|XP_001989998.1| GH19101 [Drosophila grimshawi]
gi|193894194|gb|EDV93060.1| GH19101 [Drosophila grimshawi]
Length = 476
Score = 191 bits (486), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 107/306 (34%), Positives = 166/306 (54%), Gaps = 25/306 (8%)
Query: 51 FDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRK-DKSSYGFIHYFDRRSAAM 109
D S +++YVGN+ V+E LL +F GPV+ CK+IR+ Y FI Y + ++A+
Sbjct: 1 MDESQPKTLYVGNLDGTVSEELLVALFGKMGPVKSCKIIREPGNDPYAFIEYSNYQAAST 60
Query: 110 AILSLNGRHLFGQPIKVNWAYASGQ--REDTSGHFNIFVGDLSPEVTDATLFACFSVYPS 167
A+ ++N R + IKVNWA + G + D S H +IFVGDLSPE+ TL F+ +
Sbjct: 61 ALTAMNKRVFLDKEIKVNWATSPGNTPKTDISSHHHIFVGDLSPEIETETLREAFAPFGE 120
Query: 168 CSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNED 227
S+ R++ D +T +S+G+ FVSF + +A++AI + G+W+GSR IR NW+T+ +
Sbjct: 121 ISNCRIVRDPQTMKSKGYAFVSFVKKAEAENAIQAMNGQWIGSRSIRTNWSTRKLPPPRE 180
Query: 228 KQSS------------DAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVT 275
S + + N +E + +P N TTVY G P V
Sbjct: 181 SSKSGGQGGGMGGMGGGGGAGNGIKNNQRHTFEEVYSQSSPTN----TTVYCGGFQPHVI 236
Query: 276 QLDL-HRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMK 334
+L H+HF G I++VRV +DKGF F+++ AA AI+ + T+ + G +K
Sbjct: 237 SDELMHKHFMQFGP--IQDVRVFKDKGFAFIKFVAKEAAARAIEHTHNTE---VHGNHVK 291
Query: 335 CSWGSK 340
C WG +
Sbjct: 292 CFWGKE 297
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/221 (19%), Positives = 85/221 (38%), Gaps = 51/221 (23%)
Query: 49 PGFDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKS----SYGFIHYFDR 104
P D S+ ++VG++ ++ L+E F+ G + C+++R ++ Y F+ + +
Sbjct: 87 PKTDISSHHHIFVGDLSPEIETETLREAFAPFGEISNCRIVRDPQTMKSKGYAFVSFVKK 146
Query: 105 RSAAMAILSLNGRHLFGQPIKVNWA--------------------------------YAS 132
A AI ++NG+ + + I+ NW+ +
Sbjct: 147 AEAENAIQAMNGQWIGSRSIRTNWSTRKLPPPRESSKSGGQGGGMGGMGGGGGAGNGIKN 206
Query: 133 GQR--------EDTSGHFNIFVGDLSPEV-TDATLFACFSVYPSCSDARVMWDQKTGRSR 183
QR + + + ++ G P V +D + F + D RV D +
Sbjct: 207 NQRHTFEEVYSQSSPTNTTVYCGGFQPHVISDELMHKHFMQFGPIQDVRVFKD------K 260
Query: 184 GFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGN 224
GF F+ F ++ A AI + ++C W + G+
Sbjct: 261 GFAFIKFVAKEAAARAIEHTHNTEVHGNHVKCFWGKENGGD 301
>gi|193648018|ref|XP_001950341.1| PREDICTED: nucleolysin TIAR-like [Acyrthosiphon pisum]
Length = 388
Score = 191 bits (486), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 108/298 (36%), Positives = 162/298 (54%), Gaps = 20/298 (6%)
Query: 52 DPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS-YGFIHYFDRRSAAMA 110
D S R++YVGN+ VTE LL +F++ GPV CK+IR+ S Y F+ + AA A
Sbjct: 3 DESNPRTLYVGNLDPSVTEELLCALFTNIGPVNACKVIREPGSDPYAFLEFDTHSGAATA 62
Query: 111 ILSLNGRHLFGQPIKVNWAYASGQ--REDTSGHFNIFVGDLSPEVTDATLFACFSVYPSC 168
+ ++NGR + +KVNWA G + DTS H++IFVGDLSPE+ TL F+ +
Sbjct: 63 LAAMNGRLFLDKEMKVNWATTPGNQPKLDTSNHYHIFVGDLSPEIETHTLKEAFAPFGEI 122
Query: 169 SDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDK 228
S+ R++ D +T +S+G+ FVSF + DA++AIN + G+WLGSR IR NW+T+
Sbjct: 123 SNCRIVRDPQTLKSKGYAFVSFVKKSDAENAINSMNGQWLGSRSIRTNWSTRKPPPPRAP 182
Query: 229 QSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGA 288
V + N +P N TVY G + +T+ + + F
Sbjct: 183 NKYSGYRAVTF--------DDVYNQSSPTN----CTVYCGGIVEGLTEELVEQVFSRF-- 228
Query: 289 GVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSKPTPPGT 346
G I E+R RDKG+ F+++ST A AI+ + T+ + G +KC WG + P +
Sbjct: 229 GTIVEIRAFRDKGYAFIKFSTKEAATTAIEAVHNTE---INGHPVKCFWGKESGDPNS 283
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/201 (20%), Positives = 86/201 (42%), Gaps = 30/201 (14%)
Query: 49 PGFDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKS----SYGFIHYFDR 104
P D S ++VG++ ++ L+E F+ G + C+++R ++ Y F+ + +
Sbjct: 88 PKLDTSNHYHIFVGDLSPEIETHTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKK 147
Query: 105 RSAAMAILSLNGRHLFGQPIKVNWAYA-----------SGQR---------EDTSGHFNI 144
A AI S+NG+ L + I+ NW+ SG R + + + +
Sbjct: 148 SDAENAINSMNGQWLGSRSIRTNWSTRKPPPPRAPNKYSGYRAVTFDDVYNQSSPTNCTV 207
Query: 145 FVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLT 204
+ G + +T+ + FS + + + R R +G+ F+ F ++ A +AI +
Sbjct: 208 YCGGIVEGLTEELVEQVFSRFGTIVEIRAF------RDKGYAFIKFSTKEAATTAIEAVH 261
Query: 205 GKWLGSRQIRCNWATKGAGNN 225
+ ++C W + N
Sbjct: 262 NTEINGHPVKCFWGKESGDPN 282
>gi|304798|gb|AAA28828.1| polyadenylate-binding protein [Drosophila melanogaster]
gi|304800|gb|AAA02941.1| polyadenylate-binding protein [Drosophila melanogaster]
Length = 465
Score = 191 bits (485), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 111/303 (36%), Positives = 165/303 (54%), Gaps = 22/303 (7%)
Query: 51 FDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKD-KSSYGFIHYFDRRSAAM 109
D S +++YVGN+ + V+E LL +FS+ GPV+ CK+IR+ Y FI Y + ++A
Sbjct: 1 MDESQPKTLYVGNLDSSVSEDLLIALFSTMGPVKSCKIIREPGNDPYAFIEYSNYQAATT 60
Query: 110 AILSLNGRHLFGQPIKVNWAYASGQ--REDTSGHFNIFVGDLSPEVTDATLFACFSVYPS 167
A+ ++N R + IKVNWA + G + D S H +IFVGDLSPE+ TL F+ +
Sbjct: 61 ALTAMNKRLFLEKEIKVNWATSPGNQPKTDISSHHHIFVGDLSPEIETETLREAFAPFGE 120
Query: 168 CSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATK------- 220
S+ R++ D T +S+G+ FVSF + +A++AI + +W+ SR IR NW+T+
Sbjct: 121 ISNCRIVRDPHTMKSKGYAFVSFVKKAEAENAIQAMNRQWIASRSIRTNWSTRKLPPPRE 180
Query: 221 -GAGNNEDKQSSDAKSVVELTNGSSEDG-KETTNTEAPENNPQYTTVYVGNLAPEVTQLD 278
G + GS +E N +P N TTVY G P V D
Sbjct: 181 PSKGGGQGGGMGGGPGNGSGVKGSQRHTFEEVYNQSSPTN----TTVYCGGFPPNVISDD 236
Query: 279 L-HRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSW 337
L H+HF G I++VRV +DKGF F+++ T AA AI+ T +S + G +KC W
Sbjct: 237 LMHKHFVQFGP--IQDVRVFKDKGFSFIKFVTKEAAAHAIEH---THNSEVHGNLVKCFW 291
Query: 338 GSK 340
G +
Sbjct: 292 GKE 294
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/218 (19%), Positives = 81/218 (37%), Gaps = 48/218 (22%)
Query: 49 PGFDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKS----SYGFIHYFDR 104
P D S+ ++VG++ ++ L+E F+ G + C+++R + Y F+ + +
Sbjct: 87 PKTDISSHHHIFVGDLSPEIETETLREAFAPFGEISNCRIVRDPHTMKSKGYAFVSFVKK 146
Query: 105 RSAAMAILSLNGRHLFGQPIKVNWA-----------------------------YASGQR 135
A AI ++N + + + I+ NW+ QR
Sbjct: 147 AEAENAIQAMNRQWIASRSIRTNWSTRKLPPPREPSKGGGQGGGMGGGPGNGSGVKGSQR 206
Query: 136 EDTSGHFN--------IFVGDLSPEV-TDATLFACFSVYPSCSDARVMWDQKTGRSRGFG 186
+N ++ G P V +D + F + D RV D +GF
Sbjct: 207 HTFEEVYNQSSPTNTTVYCGGFPPNVISDDLMHKHFVQFGPIQDVRVFKD------KGFS 260
Query: 187 FVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGN 224
F+ F ++ A AI + ++C W + G+
Sbjct: 261 FIKFVTKEAAAHAIEHTHNSEVHGNLVKCFWGKENGGD 298
>gi|16215602|emb|CAC95017.1| TIAR protein [Xenopus laevis]
Length = 389
Score = 191 bits (484), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 116/312 (37%), Positives = 173/312 (55%), Gaps = 39/312 (12%)
Query: 57 RSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRK-------------------DKSSYG 97
R++YVGN+ VTE L+ ++FS GP + CK I + + Y
Sbjct: 8 RTLYVGNLSRDVTEVLILQLFSQIGPCKSCKSITEQTDGRRVGASVSFPVLPNANNDPYC 67
Query: 98 FIHYFDRRSAAMAILSLNGRHLFGQPIKVNWAYA-SGQREDTSGHFNIFVGDLSPEVTDA 156
F+ +++ R AA A+ ++NGR + G+ +KVNWA S Q++DTS HF++FVGDLSPE+T
Sbjct: 68 FVEFYEHRDAAAALAAMNGRKILGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTE 127
Query: 157 TLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCN 216
+ + F+ + SDARV+ D T +S+G+GFVSF N+ DA++AI + G+WLG RQIR N
Sbjct: 128 DIKSAFAPFGKISDARVVKDMATSKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTN 187
Query: 217 WATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQ 276
WAT+ + Q ++ K + + N +N TVY G + +T+
Sbjct: 188 WATRKPPAPKSTQENNTKQL---------RFDDVVNQSTAKN----CTVYCGGIGSGLTE 234
Query: 277 LDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCS 336
+ + F G I E+RV +KG+ F+R+STH AA AI N T + G +KC
Sbjct: 235 QLMRQTFGVFGQ--ILEIRVFPEKGYSFIRFSTHDSAAHAIVSVNGTT---IEGHVVKCY 289
Query: 337 WGSKPTPPGTSS 348
WG K TP T +
Sbjct: 290 WG-KETPDMTKN 300
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 103/236 (43%), Gaps = 57/236 (24%)
Query: 136 EDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRG----------- 184
ED ++VG+LS +VT+ + FS C + + +Q GR G
Sbjct: 2 EDDGQPRTLYVGNLSRDVTEVLILQLFSQIGPCKSCKSITEQTDGRRVGASVSFPVLPNA 61
Query: 185 ----FGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELT 240
+ FV F +DA +A+ + G+ + ++++ NWAT
Sbjct: 62 NNDPYCFVEFYEHRDAAAALAAMNGRKILGKEVKVNWATT-------------------- 101
Query: 241 NGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLG----AGVIEEVRV 296
S K+T+N + V+VG+L+PE+T D+ F G A V++++
Sbjct: 102 --PSSQKKDTSN---------HFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMAT 150
Query: 297 QRDKGFGFVRYSTHAEAALAI-QMGNTTQSSYLFGKQMKCSWGSK--PTPPGTSSN 349
+ KG+GFV + +A AI MG +L G+Q++ +W ++ P P T N
Sbjct: 151 SKSKGYGFVSFYNKLDAENAIVHMG----GQWLGGRQIRTNWATRKPPAPKSTQEN 202
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/204 (19%), Positives = 86/204 (42%), Gaps = 29/204 (14%)
Query: 52 DPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS----YGFIHYFDRRSA 107
D S V+VG++ ++T ++ F+ G + ++++ +S YGF+ ++++ A
Sbjct: 108 DTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATSKSKGYGFVSFYNKLDA 167
Query: 108 AMAILSLNGRHLFGQPIKVNWA-------------------YASGQREDTSGHFNIFVGD 148
AI+ + G+ L G+ I+ NWA + + T+ + ++ G
Sbjct: 168 ENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQENNTKQLRFDDVVNQSTAKNCTVYCGG 227
Query: 149 LSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWL 208
+ +T+ + F V+ + RV +G+ F+ F A AI + G +
Sbjct: 228 IGSGLTEQLMRQTFGVFGQILEIRVF------PEKGYSFIRFSTHDSAAHAIVSVNGTTI 281
Query: 209 GSRQIRCNWATKGAGNNEDKQSSD 232
++C W + ++ Q D
Sbjct: 282 EGHVVKCYWGKETPDMTKNFQQVD 305
>gi|410900506|ref|XP_003963737.1| PREDICTED: nucleolysin TIAR-like isoform 2 [Takifugu rubripes]
Length = 408
Score = 191 bits (484), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 112/316 (35%), Positives = 173/316 (54%), Gaps = 45/316 (14%)
Query: 52 DPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLI----RKDK-------------- 93
+ S +++YVGN+ VTE L+ ++FS GP + CK+I +D+
Sbjct: 3 EESLSKTLYVGNLSRDVTEILILQLFSQIGPCKSCKMITDVNNRDRLLEWLQLNNFYVWL 62
Query: 94 --------SSYGFIHYFDRRSAAMAILSLNGRHLFGQPIKVNWAYA-SGQREDTSGHFNI 144
Y F+ + D + AA A ++N R + G+ +KVNWA + S Q++DTS HF++
Sbjct: 63 CCLQHTSSDPYCFVEFVDHKDAASARATMNKRKILGKEVKVNWATSPSCQKKDTSNHFHV 122
Query: 145 FVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLT 204
FVGDLSP++T + A F+ + SDARV+ D TG+S+G+GFVSF N+ DA++AI+ +
Sbjct: 123 FVGDLSPDITTEDIRAAFAPFGHISDARVLKDMATGKSKGYGFVSFYNKLDAENAISKMA 182
Query: 205 GKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTT 264
G+WL RQIR NWAT+ + Q + +K + + +++P T
Sbjct: 183 GQWLQGRQIRTNWATRKPPAPKSFQDNGSKHL-------------KFDDIVTQSSPHNCT 229
Query: 265 VYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQ 324
VY G + +T+ + + F G I E+RV DKG+ FVR+S+H AA AI N T
Sbjct: 230 VYCGGIQSGLTEHLMQQTFSPFGQ--IMEIRVFPDKGYSFVRFSSHDSAAHAIVSVNGT- 286
Query: 325 SSYLFGKQMKCSWGSK 340
+ G +KC WG +
Sbjct: 287 --VIEGNLVKCFWGKE 300
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 43/80 (53%), Gaps = 3/80 (3%)
Query: 53 PSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSSYGFIHYFDRRSAAMAIL 112
P C +VY G I + +TE L+Q+ FS G + ++ DK Y F+ + SAA AI+
Sbjct: 225 PHNC-TVYCGGIQSGLTEHLMQQTFSPFGQIMEIRVF-PDKG-YSFVRFSSHDSAAHAIV 281
Query: 113 SLNGRHLFGQPIKVNWAYAS 132
S+NG + G +K W S
Sbjct: 282 SVNGTVIEGNLVKCFWGKES 301
>gi|443687463|gb|ELT90434.1| hypothetical protein CAPTEDRAFT_110688, partial [Capitella teleta]
Length = 353
Score = 191 bits (484), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 112/290 (38%), Positives = 168/290 (57%), Gaps = 26/290 (8%)
Query: 60 YVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS-YGFIHYFDRRSAAMAILSLNGRH 118
YVGN+ VTE LL +F S GP +GCK+I + + Y F+ + + SAA+A+ ++N R
Sbjct: 1 YVGNLDPTVTEDLLMALFGSIGPCKGCKIIHETGNEPYAFVEFSEHSSAALALGTMNKRT 60
Query: 119 LFGQPIKVNWAYASGQ--REDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWD 176
FG+ +KVNWA + G ++DTS H +IFVGDLSP++ L F + + SD +++ D
Sbjct: 61 CFGREMKVNWATSPGTQTKQDTSKHHHIFVGDLSPDIETPQLREAFKPFGTISDCKIIRD 120
Query: 177 QKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSSDAKSV 236
+T +S+G+GFVS+ +++A++AIN + G+W+GSR IR NWA + A
Sbjct: 121 PQTLKSKGYGFVSYVERKEAENAINSMNGQWIGSRAIRTNWAIR----------KPAAPA 170
Query: 237 VELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGA-GVIEEVR 295
+ TN E +P N TVY G + +T+ DL R + G G IEE+R
Sbjct: 171 TKETNAQPLTFDEVFKKSSPTN----CTVYCGGILSGLTE-DLVR--SAFGEHGKIEEIR 223
Query: 296 VQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWG--SKPTP 343
V +DKG+ F+RY+T A AI + T+ + G +KCSWG SK +P
Sbjct: 224 VFKDKGYAFIRYNTKEAATEAIVKMHQTE---VGGHTVKCSWGKESKDSP 270
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/198 (21%), Positives = 88/198 (44%), Gaps = 28/198 (14%)
Query: 52 DPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKS----SYGFIHYFDRRSA 107
D S ++VG++ + P L+E F G + CK+IR ++ YGF+ Y +R+ A
Sbjct: 81 DTSKHHHIFVGDLSPDIETPQLREAFKPFGTISDCKIIRDPQTLKSKGYGFVSYVERKEA 140
Query: 108 AMAILSLNGRHLFGQPIKVNWA------------------YASGQREDTSGHFNIFVGDL 149
AI S+NG+ + + I+ NWA + ++ + + ++ G +
Sbjct: 141 ENAINSMNGQWIGSRAIRTNWAIRKPAAPATKETNAQPLTFDEVFKKSSPTNCTVYCGGI 200
Query: 150 SPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLG 209
+T+ + + F + + RV D +G+ F+ + ++ A AI + +G
Sbjct: 201 LSGLTEDLVRSAFGEHGKIEEIRVFKD------KGYAFIRYNTKEAATEAIVKMHQTEVG 254
Query: 210 SRQIRCNWATKGAGNNED 227
++C+W + + D
Sbjct: 255 GHTVKCSWGKESKDSPAD 272
>gi|297687493|ref|XP_002821247.1| PREDICTED: nucleolysin TIAR isoform 2 [Pongo abelii]
gi|410976207|ref|XP_003994514.1| PREDICTED: nucleolysin TIAR isoform 2 [Felis catus]
Length = 393
Score = 190 bits (482), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 114/305 (37%), Positives = 171/305 (56%), Gaps = 39/305 (12%)
Query: 57 RSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLI------RKDKSS-------------YG 97
R++YVGN+ VTE L+ ++FS GP + CK+I R+ SS Y
Sbjct: 9 RTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEQPDSRRVNSSVGFSVLQHTSNDPYC 68
Query: 98 FIHYFDRRSAAMAILSLNGRHLFGQPIKVNWAYASGQREDT--SGHFNIFVGDLSPEVTD 155
F+ +++ R AA A+ ++NGR + G+ +KVNWA ++ HF++FVGDLSPE+T
Sbjct: 69 FVEFYEHRDAAAALAAMNGRKILGKEVKVNWATTPSSQKKILPVNHFHVFVGDLSPEITT 128
Query: 156 ATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRC 215
+ + F+ + SDARV+ D TG+S+G+GFVSF N+ DA++AI + G+WLG RQIR
Sbjct: 129 EDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRT 188
Query: 216 NWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVT 275
NWAT+ + Q ++ K + ++ N +P+N TVY G +A +T
Sbjct: 189 NWATRKPPAPKSTQENNTKQL---------RFEDVVNQSSPKN----CTVYCGGIASGLT 235
Query: 276 QLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKC 335
+ + F G I E+RV +KG+ FVR+STH AA AI N T + G +KC
Sbjct: 236 DQLMRQTFSPFGQ--IMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTT---IEGHVVKC 290
Query: 336 SWGSK 340
WG +
Sbjct: 291 YWGKE 295
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 103/236 (43%), Gaps = 56/236 (23%)
Query: 136 EDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGR----SRGFG----- 186
ED ++VG+LS +VT+ + FS C +++ +Q R S GF
Sbjct: 3 EDDGQPRTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEQPDSRRVNSSVGFSVLQHT 62
Query: 187 ------FVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELT 240
FV F +DA +A+ + G+ + ++++ NWAT S K ++ +
Sbjct: 63 SNDPYCFVEFYEHRDAAAALAAMNGRKILGKEVKVNWATT---------PSSQKKILPVN 113
Query: 241 NGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLG----AGVIEEVRV 296
+ V+VG+L+PE+T D+ F G A V++++
Sbjct: 114 ---------------------HFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMAT 152
Query: 297 QRDKGFGFVRYSTHAEAALAI-QMGNTTQSSYLFGKQMKCSWGSK--PTPPGTSSN 349
+ KG+GFV + +A AI MG +L G+Q++ +W ++ P P T N
Sbjct: 153 GKSKGYGFVSFYNKLDAENAIVHMG----GQWLGGRQIRTNWATRKPPAPKSTQEN 204
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 41/197 (20%), Positives = 84/197 (42%), Gaps = 29/197 (14%)
Query: 59 VYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRK----DKSSYGFIHYFDRRSAAMAILSL 114
V+VG++ ++T ++ F+ G + ++++ YGF+ ++++ A AI+ +
Sbjct: 117 VFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHM 176
Query: 115 NGRHLFGQPIKVNWAY------ASGQREDTS-------------GHFNIFVGDLSPEVTD 155
G+ L G+ I+ NWA S Q +T + ++ G ++ +TD
Sbjct: 177 GGQWLGGRQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGLTD 236
Query: 156 ATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRC 215
+ FS + + RV +G+ FV F + A AI + G + ++C
Sbjct: 237 QLMRQTFSPFGQIMEIRVF------PEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKC 290
Query: 216 NWATKGAGNNEDKQSSD 232
W + ++ Q D
Sbjct: 291 YWGKESPDMTKNFQQVD 307
>gi|170055835|ref|XP_001863758.1| nucleolysin tia-1 [Culex quinquefasciatus]
gi|167875726|gb|EDS39109.1| nucleolysin tia-1 [Culex quinquefasciatus]
Length = 456
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 109/293 (37%), Positives = 166/293 (56%), Gaps = 20/293 (6%)
Query: 52 DPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS-YGFIHYFDRRSAAMA 110
D + +++YVGN+ VTE LL +F G V+ CK+IR+ S Y FI Y +SA A
Sbjct: 3 DEAYPKTLYVGNLDQSVTEDLLCALFGQMGAVKSCKIIREASSDPYAFIEYASHQSAQTA 62
Query: 111 ILSLNGRHLFGQPIKVNWAYASGQ--REDTSGHFNIFVGDLSPEVTDATLFACFSVYPSC 168
+ ++N R + IKVNWA + G + DTS H +IFVGDLSPE+ TL F+ +
Sbjct: 63 LAAMNKRLFLKKEIKVNWATSPGNQPKTDTSQHHHIFVGDLSPEIETETLREAFAPFGEI 122
Query: 169 SDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDK 228
S+ R++ D +T +S+G+ FVSF + +A++AI + G+WLGSR IR NW+T+ K
Sbjct: 123 SNCRIVRDPQTLKSKGYAFVSFVKKAEAENAIQMMNGQWLGSRSIRTNWSTR-------K 175
Query: 229 QSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHR-HFHSLG 287
+ ++ + +G + +E N P N TTVY G P +L + HF G
Sbjct: 176 PPAPRENTKGIKSGKTPGFEEIYNNTGPTN----TTVYCGGFPPNTISDNLIKTHFGQFG 231
Query: 288 AGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSK 340
+ I +VRV +DKG+ F+++ + AA AI+ T +S + G +KC WG +
Sbjct: 232 S--IHDVRVFKDKGYAFIKFISKEAAARAIE---GTHNSEVQGHPVKCYWGKE 279
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/201 (21%), Positives = 84/201 (41%), Gaps = 32/201 (15%)
Query: 49 PGFDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKS----SYGFIHYFDR 104
P D S ++VG++ ++ L+E F+ G + C+++R ++ Y F+ + +
Sbjct: 88 PKTDTSQHHHIFVGDLSPEIETETLREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKK 147
Query: 105 RSAAMAILSLNGRHLFGQPIKVNWAYAS--GQREDTSG-------------------HFN 143
A AI +NG+ L + I+ NW+ RE+T G +
Sbjct: 148 AEAENAIQMMNGQWLGSRSIRTNWSTRKPPAPRENTKGIKSGKTPGFEEIYNNTGPTNTT 207
Query: 144 IFVGDLSPE-VTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAIND 202
++ G P ++D + F + S D RV D +G+ F+ F +++ A AI
Sbjct: 208 VYCGGFPPNTISDNLIKTHFGQFGSIHDVRVFKD------KGYAFIKFISKEAAARAIEG 261
Query: 203 LTGKWLGSRQIRCNWATKGAG 223
+ ++C W + G
Sbjct: 262 THNSEVQGHPVKCYWGKENGG 282
>gi|332376136|gb|AEE63208.1| unknown [Dendroctonus ponderosae]
Length = 371
Score = 189 bits (480), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 108/309 (34%), Positives = 173/309 (55%), Gaps = 20/309 (6%)
Query: 52 DPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRK-DKSSYGFIHYFDRRSAAMA 110
D + +++YVGN+ V E LL +FS GPV+GCK+IR+ Y F+ + + +SA+ A
Sbjct: 3 DEAYPKTLYVGNLDISVQEDLLCALFSQIGPVKGCKIIREPGNDPYAFVEFTNHQSASTA 62
Query: 111 ILSLNGRHLFGQPIKVNWAYASGQ--REDTSGHFNIFVGDLSPEVTDATLFACFSVYPSC 168
++++N R + +KVNWA + G + DTS H +IFVGDLSPE+ TL F+ +
Sbjct: 63 LIAMNKRVFLDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETDTLREAFAPFGEI 122
Query: 169 SDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDK 228
S+ R++ D +T +S+G+ FVSF + +A++AI + G+WLGSR IR NW+T+ +
Sbjct: 123 SNCRIVRDPQTLKSKGYAFVSFVKKAEAENAIQAMNGQWLGSRSIRTNWSTRKPPPPRAE 182
Query: 229 QSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGA 288
+ + +K + E N +P N TTVY G A +T + + F GA
Sbjct: 183 KPNQSKKQITF--------DEVYNQTSPTN----TTVYCGGFASGLTDDLVTKTFSRFGA 230
Query: 289 GVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSKPTPPGTSS 348
I+++RV +DKG+ F+++ + A AI+ + T+ + G +KC WG + G
Sbjct: 231 --IQDIRVFKDKGYAFIKFVSKESATHAIENIHNTE---INGHTVKCFWGKENGGLGPDV 285
Query: 349 NPLPPPAAA 357
N L AA
Sbjct: 286 NALSATGAA 294
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/203 (20%), Positives = 87/203 (42%), Gaps = 30/203 (14%)
Query: 49 PGFDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKS----SYGFIHYFDR 104
P D S ++VG++ ++ L+E F+ G + C+++R ++ Y F+ + +
Sbjct: 88 PKTDTSNHHHIFVGDLSPEIETDTLREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKK 147
Query: 105 RSAAMAILSLNGRHLFGQPIKVNWA--------------------YASGQREDTSGHFNI 144
A AI ++NG+ L + I+ NW+ + + + + +
Sbjct: 148 AEAENAIQAMNGQWLGSRSIRTNWSTRKPPPPRAEKPNQSKKQITFDEVYNQTSPTNTTV 207
Query: 145 FVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLT 204
+ G + +TD + FS + + D RV D +G+ F+ F +++ A AI ++
Sbjct: 208 YCGGFASGLTDDLVTKTFSRFGAIQDIRVFKD------KGYAFIKFVSKESATHAIENIH 261
Query: 205 GKWLGSRQIRCNWATKGAGNNED 227
+ ++C W + G D
Sbjct: 262 NTEINGHTVKCFWGKENGGLGPD 284
>gi|383863609|ref|XP_003707272.1| PREDICTED: nucleolysin TIAR-like [Megachile rotundata]
Length = 392
Score = 189 bits (479), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 104/298 (34%), Positives = 169/298 (56%), Gaps = 19/298 (6%)
Query: 52 DPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRK-DKSSYGFIHYFDRRSAAMA 110
+ S R++YVGN+ + V+E LL +FS G V+GCK+IR+ Y F+ + + + AA A
Sbjct: 3 EESNPRTLYVGNLDSSVSEELLCALFSQIGAVKGCKIIREPGNDPYAFVEFTNHQCAATA 62
Query: 111 ILSLNGRHLFGQPIKVNWAYASGQ--REDTSGHFNIFVGDLSPEVTDATLFACFSVYPSC 168
+ ++N R + +KVNWA + G + DTS H +IFVGDLSPE+ TL F+ +
Sbjct: 63 LAAMNKRSFLNKEMKVNWATSPGNQPKLDTSNHHHIFVGDLSPEIETQTLKEAFAPFGEI 122
Query: 169 SDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDK 228
S+ R++ D +T +S+G+ FVSF + +A++AI + G+WLGSR IR NW+T+ K
Sbjct: 123 SNCRIVRDPQTMKSKGYAFVSFVKKSEAEAAIAAMNGQWLGSRSIRTNWSTR-------K 175
Query: 229 QSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGA 288
+N S + +E N +P N TVY G +T +++ F
Sbjct: 176 PPPPRSERPRHSNNSKPNYEEVYNQSSPTN----CTVYCGGFTNGITDELINKTFSPF-- 229
Query: 289 GVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSKPTPPGT 346
G I+++RV +DKG+ F++++T A AI+ +T ++ + G +KC WG + P +
Sbjct: 230 GTIQDIRVFKDKGYAFIKFTTKEAATHAIE---STHNTEINGSIVKCFWGKENGDPNS 284
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/202 (20%), Positives = 83/202 (41%), Gaps = 31/202 (15%)
Query: 49 PGFDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKS----SYGFIHYFDR 104
P D S ++VG++ ++ L+E F+ G + C+++R ++ Y F+ + +
Sbjct: 88 PKLDTSNHHHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTMKSKGYAFVSFVKK 147
Query: 105 RSAAMAILSLNGRHLFGQPIKVNWA---------------------YASGQREDTSGHFN 143
A AI ++NG+ L + I+ NW+ Y + + +
Sbjct: 148 SEAEAAIAAMNGQWLGSRSIRTNWSTRKPPPPRSERPRHSNNSKPNYEEVYNQSSPTNCT 207
Query: 144 IFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDL 203
++ G + +TD + FS + + D RV D +G+ F+ F ++ A AI
Sbjct: 208 VYCGGFTNGITDELINKTFSPFGTIQDIRVFKD------KGYAFIKFTTKEAATHAIEST 261
Query: 204 TGKWLGSRQIRCNWATKGAGNN 225
+ ++C W + N
Sbjct: 262 HNTEINGSIVKCFWGKENGDPN 283
>gi|110756942|ref|XP_395357.3| PREDICTED: nucleolysin TIAR [Apis mellifera]
gi|340713958|ref|XP_003395500.1| PREDICTED: nucleolysin TIAR-like [Bombus terrestris]
gi|350421173|ref|XP_003492759.1| PREDICTED: nucleolysin TIAR-like [Bombus impatiens]
gi|380025693|ref|XP_003696603.1| PREDICTED: nucleolysin TIAR-like [Apis florea]
Length = 392
Score = 189 bits (479), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 105/298 (35%), Positives = 168/298 (56%), Gaps = 19/298 (6%)
Query: 52 DPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRK-DKSSYGFIHYFDRRSAAMA 110
+ S R++YVGN+ T V+E LL +FS G V+GCK+IR+ Y F+ + + + AA A
Sbjct: 3 EESNPRTLYVGNLDTSVSEELLCALFSQIGAVKGCKIIREPGNDPYAFVEFTNHQCAATA 62
Query: 111 ILSLNGRHLFGQPIKVNWAYASGQ--REDTSGHFNIFVGDLSPEVTDATLFACFSVYPSC 168
+ ++N R + +KVNWA + G + DTS H +IFVGDLSPE+ TL F+ +
Sbjct: 63 LAAMNKRSFLNKEMKVNWATSPGNQPKLDTSNHHHIFVGDLSPEIETQTLKEAFAPFGEI 122
Query: 169 SDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDK 228
S+ R++ D +T +S+G+ FVSF + +A++AI + G+WLGSR IR NW+T+ K
Sbjct: 123 SNCRIVRDPQTMKSKGYAFVSFVKKSEAEAAIAAMNGQWLGSRSIRTNWSTR-------K 175
Query: 229 QSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGA 288
+N S + +E N +P N TVY G +T + + F
Sbjct: 176 PPPPRSERPRHSNNSKPNYEEVYNQSSPTN----CTVYCGGFTNGITDDLITKTFSPF-- 229
Query: 289 GVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSKPTPPGT 346
G I+++RV +DKG+ F++++T A AI+ +T ++ + G +KC WG + P +
Sbjct: 230 GTIQDIRVFKDKGYAFIKFTTKEAATHAIE---STHNTEINGSIVKCFWGKENGDPNS 284
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/202 (20%), Positives = 83/202 (41%), Gaps = 31/202 (15%)
Query: 49 PGFDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKS----SYGFIHYFDR 104
P D S ++VG++ ++ L+E F+ G + C+++R ++ Y F+ + +
Sbjct: 88 PKLDTSNHHHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTMKSKGYAFVSFVKK 147
Query: 105 RSAAMAILSLNGRHLFGQPIKVNWA---------------------YASGQREDTSGHFN 143
A AI ++NG+ L + I+ NW+ Y + + +
Sbjct: 148 SEAEAAIAAMNGQWLGSRSIRTNWSTRKPPPPRSERPRHSNNSKPNYEEVYNQSSPTNCT 207
Query: 144 IFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDL 203
++ G + +TD + FS + + D RV D +G+ F+ F ++ A AI
Sbjct: 208 VYCGGFTNGITDDLITKTFSPFGTIQDIRVFKD------KGYAFIKFTTKEAATHAIEST 261
Query: 204 TGKWLGSRQIRCNWATKGAGNN 225
+ ++C W + N
Sbjct: 262 HNTEINGSIVKCFWGKENGDPN 283
>gi|62088002|dbj|BAD92448.1| TIA1 protein variant [Homo sapiens]
Length = 464
Score = 188 bits (477), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 115/326 (35%), Positives = 176/326 (53%), Gaps = 47/326 (14%)
Query: 57 RSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRRSAAMAILSL 114
+++YVGN+ VTE L+ ++FS GP + CK+I + Y F+ + + R AA A+ ++
Sbjct: 45 KTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFHEHRHAAAALAAM 104
Query: 115 NGRHLFGQPIKVNWAYA-SGQREDTSG-----------HFNIFVGDLSPEVTDATLFACF 162
NGR + G+ +KVNWA S Q++DTS HF++FVGDLSPE+T + A F
Sbjct: 105 NGRKIMGKEVKVNWATTPSSQKKDTSSSTVVSTQRSQDHFHVFVGDLSPEITTEDIKAAF 164
Query: 163 SVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATK-- 220
+ + SDARV+ D TG+S+G+GFVSF N+ DA++AI + G+WLG RQIR NWAT+
Sbjct: 165 APFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKP 224
Query: 221 -------------------GAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTE------- 254
G + S + + E+ + + +NT+
Sbjct: 225 PAPKSTYECRCIGEEKEMWNFGEKYARFSCSRRLIAEIDEKQIKTTIQKSNTKQLSYDEV 284
Query: 255 APENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAA 314
+++P TVY G + +T+ + + F G I E+RV DKG+ FVR+++H AA
Sbjct: 285 VNQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQ--IMEIRVFPDKGYSFVRFNSHESAA 342
Query: 315 LAIQMGNTTQSSYLFGKQMKCSWGSK 340
AI N T + G +KC WG +
Sbjct: 343 HAIVSVNGTT---IEGHVVKCYWGKE 365
>gi|384247365|gb|EIE20852.1| hypothetical protein COCSUDRAFT_4708, partial [Coccomyxa
subellipsoidea C-169]
Length = 264
Score = 187 bits (475), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 105/287 (36%), Positives = 164/287 (57%), Gaps = 33/287 (11%)
Query: 57 RSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS-----YGFIHYFDRRSAAMAI 111
+++YVGN+H V E +LQ++FS+ G V +++ KD+++ F+ + D ++AA+A+
Sbjct: 5 KALYVGNLHPYVNEAVLQDIFSTLGTVSEVRIV-KDRATGNSAGSAFVKFEDHQAAAIAL 63
Query: 112 LSLNGRHLFGQPIKVNWAYASGQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDA 171
++NGR L+ + +++ WA+ + E+T+ H +IFVG+LS +V D L F CSDA
Sbjct: 64 KTINGRILYNKEVRIQWAFQKEKTENTASHSHIFVGNLSGDVADPVLLQAFQHLGECSDA 123
Query: 172 RVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSS 231
RVMWD TGRS+GFGFVSFR ++ A+ A+ ++ G +G +IRC WA +
Sbjct: 124 RVMWDHSTGRSKGFGFVSFRTKEAAEKALAEMDGAQVGQWKIRCGWA---------HHKT 174
Query: 232 DAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVI 291
+A + +++ +T + P N T VYVGNL EV + DL F + G I
Sbjct: 175 EAVTGLDI---------DTVDRADPAN----TNVYVGNLPTEVMEEDLRAAFGAYGE--I 219
Query: 292 EEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWG 338
++ G+GFV Y H+ A AI N + L GK +KCSWG
Sbjct: 220 TGLKPCHKGGYGFVTYRDHSAAVQAIVGMNGKE---LKGKMVKCSWG 263
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 43/85 (50%), Gaps = 11/85 (12%)
Query: 259 NPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDKGFG------FVRYSTHAE 312
N +YVGNL P V + L F +L G + EVR+ +D+ G FV++ H
Sbjct: 1 NEDAKALYVGNLHPYVNEAVLQDIFSTL--GTVSEVRIVKDRATGNSAGSAFVKFEDHQA 58
Query: 313 AALAIQMGNTTQSSYLFGKQMKCSW 337
AA+A++ T L+ K+++ W
Sbjct: 59 AAIALK---TINGRILYNKEVRIQW 80
>gi|448114345|ref|XP_004202551.1| Piso0_001392 [Millerozyma farinosa CBS 7064]
gi|359383419|emb|CCE79335.1| Piso0_001392 [Millerozyma farinosa CBS 7064]
Length = 422
Score = 186 bits (472), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 129/356 (36%), Positives = 178/356 (50%), Gaps = 62/356 (17%)
Query: 59 VYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKS----SYGFIHYFDRRSAAMAILSL 114
+YVG +H V+E +L+++FSS G V+ K + DK+ SY F+ + + SA +A+ +L
Sbjct: 74 LYVGGLHKSVSEDVLRDLFSSCGGVKSIKTL-NDKNRPGFSYAFVEFENSDSADLALRTL 132
Query: 115 NGRHLFGQPIKVNWAYASGQREDTSGH---FNIFVGDLSPEVTDATLFACFSVYPSCSDA 171
NGR + IK+NWAY S S H FNIFVGDLSPEV D +L FS + S A
Sbjct: 133 NGRMVNNSVIKINWAYQSSAVSTASQHEPFFNIFVGDLSPEVDDESLHKAFSKFESLRQA 192
Query: 172 RVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSS 231
VMWD +T RSRG+GFVSF NQ DA+ A+ + G+W+G R IRCNWA+ NN ++
Sbjct: 193 HVMWDMQTSRSRGYGFVSFGNQVDAELALQTMNGEWIGGRAIRCNWASHKQFNNPKFRAG 252
Query: 232 DAKSV----------------VELTNGSSEDGKETTNTEA-------------PENNPQ- 261
+ + +L N G ++ + A P +PQ
Sbjct: 253 NNRYANHGNRQYRSFHANPMQAQLHNQPIMPGLQSQASTAFQPGAGSGNQSNIPIMSPQS 312
Query: 262 -----------YTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTH 310
TTVY+GN+A Q DL + G I + + +KG FV Y +H
Sbjct: 313 FDIVLRQTPSWQTTVYLGNIAHFTQQTDLIPLLQNF--GFIVDFKFHPEKGCAFVNYDSH 370
Query: 311 AEAALAI-QMGNTTQSSYLFGKQMKCSWGSKPTPPGTSSNPLP----PPAAAPIPG 361
AALAI Q+ T + G+ +KC WG K PP P PP+ P PG
Sbjct: 371 ERAALAIVQLAGFT----INGRPLKCGWG-KERPPINQFQGFPRGVAPPSLYP-PG 420
Score = 41.6 bits (96), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 59/135 (43%), Gaps = 28/135 (20%)
Query: 9 QQQQQQQALMQQALLQQQSLYHPGLLAAPQIE-PIPSGNLPPGFD------PSTCRSVYV 61
Q Q Q +M Q + + PG + Q PI S P FD PS +VY+
Sbjct: 273 QAQLHNQPIMPGLQSQASTAFQPGAGSGNQSNIPIMS---PQSFDIVLRQTPSWQTTVYL 329
Query: 62 GNI--HTQVTE--PLLQE----VFSSTGPVEGCKLIRKDKSSYGFIHYFDRRSAAMAILS 113
GNI TQ T+ PLLQ V P +GC F++Y AA+AI+
Sbjct: 330 GNIAHFTQQTDLIPLLQNFGFIVDFKFHPEKGC----------AFVNYDSHERAALAIVQ 379
Query: 114 LNGRHLFGQPIKVNW 128
L G + G+P+K W
Sbjct: 380 LAGFTINGRPLKCGW 394
>gi|390359470|ref|XP_782936.3| PREDICTED: nucleolysin TIAR-like [Strongylocentrotus purpuratus]
Length = 430
Score = 186 bits (472), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 114/293 (38%), Positives = 166/293 (56%), Gaps = 30/293 (10%)
Query: 57 RSVYVGNIHTQVTEPLLQEVFSSTGP--VEGCKLIRKDKSS--YGFIHYFDRRSAAMAIL 112
R++YVGN+ +VTE L+ ++F P + CK+I +S Y F+ ++D +A A++
Sbjct: 25 RTLYVGNLDRRVTEELVFQLFLQIAPSKTKSCKMIADHGNSDPYCFVEFYDSVTAEAAMV 84
Query: 113 SLNGRHLFGQPIKVNWAYASGQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDAR 172
++NGR +F +PIKVNWA G R+DT+ H ++FVGDL E+ A L A F Y S +DAR
Sbjct: 85 AMNGRTVFDKPIKVNWATTQGSRKDTTHHHHVFVGDLVQEMKTAELRALFDKYGSITDAR 144
Query: 173 VMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWL----GSRQIRCNWATKGAGNNEDK 228
V+ D +TG+SR +GFVSF ++DAQ AI ++ G L G + IR WAT+ K
Sbjct: 145 VVRDPETGKSRCYGFVSFEQEEDAQCAIKEMNGAILPQYPGMKAIRTGWATR-------K 197
Query: 229 QSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRH-FHSLG 287
+S +E ++D + N +P N TVYVG L + + DL R F G
Sbjct: 198 PTSHKPPQIE-----AKDYERVLNETSPNN----CTVYVGGLQFKFSAEDLLRKVFGPFG 248
Query: 288 AGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSK 340
A I+EVR +K F FVR++ H A AI + S + G +KCSWG +
Sbjct: 249 A--IQEVRTFPEKAFAFVRFANHESATNAIV---SVHGSPIEGHVVKCSWGKE 296
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 43/193 (22%), Positives = 78/193 (40%), Gaps = 34/193 (17%)
Query: 59 VYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKS----SYGFIHYFDRRSAAMAILSL 114
V+VG++ ++ L+ +F G + +++R ++ YGF+ + A AI +
Sbjct: 116 VFVGDLVQEMKTAELRALFDKYGSITDARVVRDPETGKSRCYGFVSFEQEEDAQCAIKEM 175
Query: 115 NGRHLFGQP----IKVNWA----------------YASGQREDTSGHFNIFVGDLSPEVT 154
NG L P I+ WA Y E + + ++VG L + +
Sbjct: 176 NGAILPQYPGMKAIRTGWATRKPTSHKPPQIEAKDYERVLNETSPNNCTVYVGGLQFKFS 235
Query: 155 DATLF-ACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQI 213
L F + + + R T + F FV F N + A +AI + G + +
Sbjct: 236 AEDLLRKVFGPFGAIQEVR------TFPEKAFAFVRFANHESATNAIVSVHGSPIEGHVV 289
Query: 214 RCNWATKGAGNNE 226
+C+W G +NE
Sbjct: 290 KCSW---GKESNE 299
>gi|67465872|ref|XP_649094.1| RNA-binding protein TIA-1 [Entamoeba histolytica HM-1:IMSS]
gi|56465456|gb|EAL43711.1| RNA-binding protein TIA-1, putative [Entamoeba histolytica
HM-1:IMSS]
gi|449705857|gb|EMD45818.1| RNA-binding protein TIA-1, putative [Entamoeba histolytica KU27]
Length = 306
Score = 186 bits (471), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 105/286 (36%), Positives = 158/286 (55%), Gaps = 30/286 (10%)
Query: 57 RSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS----YGFIHYFDRRSAAMAIL 112
+SV+V IH V E LL +FS G V CK++R DKS YGF+ + D +A A
Sbjct: 43 KSVHVSGIHESVDEILLGRIFSIVGHVVSCKIMR-DKSGVHAGYGFVEFVDSTTARFAKD 101
Query: 113 SLNGRHLFGQPIKVNWAYASGQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDAR 172
+++GR ++G+ +KVNW+Y + Q + G++ IFVG L PEV D L+ F + +DAR
Sbjct: 102 NMDGRVVYGRELKVNWSYTAQQ--ENQGNYKIFVGGLQPEVNDDLLYKTFQKFGRVTDAR 159
Query: 173 VMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSSD 232
V+ +TG+S+G+GFV+F ++DA++A+ + G+ L R I+ NW T N K
Sbjct: 160 VLKFTQTGKSKGYGFVTFIRKEDAETAMQMMNGEKLEGRNIKVNWVT---SNIASKTEQP 216
Query: 233 AKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIE 292
+S E+ N E + Q TVY+GN+ V DL + G+ IE
Sbjct: 217 KRSYDEINN---------------ETSSQNCTVYIGNIPKNVESDDLKQLLAEYGS--IE 259
Query: 293 EVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWG 338
EVR+ +DKG+ F+++S H A AI M N + G ++CSWG
Sbjct: 260 EVRLNKDKGYAFIKFSKHESATSAILMCN---GKIINGSTLRCSWG 302
Score = 46.6 bits (109), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSSYGFIHYFDRRSAAMAILSLNGR 117
+VY+GNI V L+++ + G +E +L KDK Y FI + SA AIL NG+
Sbjct: 233 TVYIGNIPKNVESDDLKQLLAEYGSIEEVRL-NKDKG-YAFIKFSKHESATSAILMCNGK 290
Query: 118 HLFGQPIKVNWAYAS 132
+ G ++ +W S
Sbjct: 291 IINGSTLRCSWGRES 305
>gi|167391953|ref|XP_001739964.1| nucleolysin TIAR [Entamoeba dispar SAW760]
gi|165896141|gb|EDR23641.1| nucleolysin TIAR, putative [Entamoeba dispar SAW760]
Length = 306
Score = 185 bits (470), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 110/306 (35%), Positives = 164/306 (53%), Gaps = 31/306 (10%)
Query: 37 PQIEPIPSGNLPPGFDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS- 95
PQ P + PP + +SV+V IH V E LL +FS G V CK++R DKS
Sbjct: 24 PQQNPTETTE-PPIPINANSKSVHVSGIHESVDEILLGRIFSIVGHVVSCKIMR-DKSGT 81
Query: 96 ---YGFIHYFDRRSAAMAILSLNGRHLFGQPIKVNWAYASGQREDTSGHFNIFVGDLSPE 152
YGF+ + D +A A +++GR ++G+ +KVNW+Y + Q + G + IFVG L PE
Sbjct: 82 HAGYGFVEFVDSTTARFAKDNMDGRVVYGRELKVNWSYTAQQ--ENQGSYKIFVGGLQPE 139
Query: 153 VTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQ 212
V D L+ F + +DARV+ +TG+S+G+GFV+F ++DA++A+ + G+ L R
Sbjct: 140 VNDDLLYKTFQKFGRVTDARVLKFTQTGKSKGYGFVTFIRKEDAETAMQMMNGEKLEGRN 199
Query: 213 IRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAP 272
I+ NW T N K +S E+ N E + Q TVY+GN+
Sbjct: 200 IKVNWVT---SNIASKTEQPKRSYDEINN---------------ETSIQNCTVYIGNIPK 241
Query: 273 EVTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQ 332
V DL + G+ IEEVR+ +DKG+ F+++S H A AI M N + G
Sbjct: 242 NVESDDLKQLLAEYGS--IEEVRLNKDKGYAFIKFSKHESATSAILMCN---GKIINGST 296
Query: 333 MKCSWG 338
++CSWG
Sbjct: 297 LRCSWG 302
Score = 46.6 bits (109), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSSYGFIHYFDRRSAAMAILSLNGR 117
+VY+GNI V L+++ + G +E +L KDK Y FI + SA AIL NG+
Sbjct: 233 TVYIGNIPKNVESDDLKQLLAEYGSIEEVRL-NKDKG-YAFIKFSKHESATSAILMCNGK 290
Query: 118 HLFGQPIKVNWAYAS 132
+ G ++ +W S
Sbjct: 291 IINGSTLRCSWGRES 305
>gi|354491765|ref|XP_003508025.1| PREDICTED: nucleolysin TIAR-like [Cricetulus griseus]
Length = 285
Score = 185 bits (470), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 104/253 (41%), Positives = 152/253 (60%), Gaps = 18/253 (7%)
Query: 57 RSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRRSAAMAILSL 114
+++YVGN+ VTE L+ ++FS GP + CK+I + Y F+ + + R AA A+ ++
Sbjct: 7 KTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFHEHRHAAAALAAM 66
Query: 115 NGRHLFGQPIKVNWAYA-SGQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARV 173
NGR + G+ +KVNWA S Q++DTS HF++FVGDLSPE+T + A F+ + SDARV
Sbjct: 67 NGRKIMGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKAAFAPFGRISDARV 126
Query: 174 MWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSSDA 233
+ D TG+S+G+GFVSF N+ DA++AI + G+WLG RQIR NWAT ++
Sbjct: 127 VKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWAT--------RKPPAP 178
Query: 234 KSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEE 293
KS EL N E + +P N TVY G + +T+ + + F G I E
Sbjct: 179 KSTYEL-NTKQLSYDEVVSQSSPSN----CTVYCGGVTSGLTEQLMRQTFSPFGQ--ILE 231
Query: 294 VRVQRDKGFGFVR 306
+RV DKG+ F+R
Sbjct: 232 IRVFPDKGYSFIR 244
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 102/213 (47%), Gaps = 42/213 (19%)
Query: 144 IFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDL 203
++VG+LS +VT+A + FS C + +++ D T + + FV F + A +A+ +
Sbjct: 9 LYVGNLSRDVTEALILQLFSQIGPCKNCKMIMD--TAGNDPYCFVEFHEHRHAAAALAAM 66
Query: 204 TGKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYT 263
G+ + ++++ NWAT S K+T+N +
Sbjct: 67 NGRKIMGKEVKVNWATT----------------------PSSQKKDTSN---------HF 95
Query: 264 TVYVGNLAPEVTQLDLHRHFHSLG----AGVIEEVRVQRDKGFGFVRYSTHAEAALAI-Q 318
V+VG+L+PE+T D+ F G A V++++ + KG+GFV + +A AI Q
Sbjct: 96 HVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQ 155
Query: 319 MGNTTQSSYLFGKQMKCSWGSKPTPPGTSSNPL 351
MG +L G+Q++ +W ++ P S+ L
Sbjct: 156 MG----GQWLGGRQIRTNWATRKPPAPKSTYEL 184
>gi|443895242|dbj|GAC72588.1| FOG: RRM domain [Pseudozyma antarctica T-34]
Length = 394
Score = 185 bits (470), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 124/371 (33%), Positives = 181/371 (48%), Gaps = 79/371 (21%)
Query: 42 IPSGNLPPGFDPSTCRS---------VYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKD 92
+PS + PG DPS R+ V+V N+ + TE L+++F+S GP++ K++
Sbjct: 3 MPSLSGLPGSDPSASRASSSLPIRPLVHVANLPSTTTERALRDMFASLGPIQSVKVVASR 62
Query: 93 KSS---YGFIHYFDRRSAAMAILSLNGRHLFGQPIKVNWAYASGQRE------------- 136
S+ YGF+ + D SA A+ +L+G FG PIKV WA S E
Sbjct: 63 NSAGLAYGFVEFVDVSSAERAVRTLDGWLCFGIPIKVCWAKQSMHPEAMTVTEPDRSAPT 122
Query: 137 -DTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQD 195
+G+ ++FVGDLSP+V D+ L++ FS PS D RVM+D +TG+SRGFGFVSFR+++D
Sbjct: 123 HSNAGNAHLFVGDLSPDVDDSMLYSSFSRLPSLVDVRVMYDAETGKSRGFGFVSFRSKRD 182
Query: 196 AQSAINDLTGKWLGSRQIRCNWATK------------------------GAGNNEDKQSS 231
A++ I + G+WLG RQIR NWA + GA + D S
Sbjct: 183 AETCIAAMQGQWLGGRQIRVNWANQKNSQLSIMSATAENPSSTPPPQYPGAYSQLDPFDS 242
Query: 232 DAKSVVELTNGSSEDG------KETTN-------------------TEAPENNPQYTTVY 266
S ++ G + TT +EAP + ++VY
Sbjct: 243 TVTSTASFFPPVADLGLPGLPRRHTTTGPTKFPSGTGAKLHFDQVLSEAPAS---VSSVY 299
Query: 267 VGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSS 326
VGNL+P T DL R F G E R+ +G+GFV +TH AA AI + Q
Sbjct: 300 VGNLSPLTTAADLVRVFAPFNRGHSVEARIPPARGYGFVTLATHEYAASAIST-LSNQGV 358
Query: 327 YLFGKQMKCSW 337
+L + ++ W
Sbjct: 359 FLHSRWLRLGW 369
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 88/205 (42%), Gaps = 34/205 (16%)
Query: 144 IFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDL 203
+ V +L T+ L F+ +V+ + + +GFV F + A+ A+ L
Sbjct: 29 VHVANLPSTTTERALRDMFASLGPIQSVKVVASRNSA-GLAYGFVEFVDVSSAERAVRTL 87
Query: 204 TGKWLGSRQIRCNWATKGAGNNEDKQS--SDAKSVVELTNGSSEDGKETTNTEAPENNPQ 261
G I+ WA KQS +A +V E D T++ A +
Sbjct: 88 DGWLCFGIPIKVCWA---------KQSMHPEAMTVTE------PDRSAPTHSNAGNAH-- 130
Query: 262 YTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRD------KGFGFVRYSTHAEAAL 315
++VG+L+P+V L+ F L + V +VRV D +GFGFV + + +A
Sbjct: 131 ---LFVGDLSPDVDDSMLYSSFSRLPSLV--DVRVMYDAETGKSRGFGFVSFRSKRDAET 185
Query: 316 AIQMGNTTQSSYLFGKQMKCSWGSK 340
I Q +L G+Q++ +W ++
Sbjct: 186 CIA---AMQGQWLGGRQIRVNWANQ 207
>gi|407038416|gb|EKE39116.1| RNA-binding protein TIA-1, putative [Entamoeba nuttalli P19]
Length = 306
Score = 185 bits (470), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 105/286 (36%), Positives = 158/286 (55%), Gaps = 30/286 (10%)
Query: 57 RSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS----YGFIHYFDRRSAAMAIL 112
+SV+V IH V E LL +FS G V CK++R DKS YGF+ + D +A A
Sbjct: 43 KSVHVSGIHESVDEILLGRIFSIVGHVVSCKIMR-DKSGVHAGYGFVEFVDSTTARFAKD 101
Query: 113 SLNGRHLFGQPIKVNWAYASGQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDAR 172
+++GR ++G+ +KVNW+Y + Q + G++ IFVG L PEV D L+ F + +DAR
Sbjct: 102 NMDGRVVYGRELKVNWSYTAQQ--ENQGNYKIFVGGLQPEVNDDLLYKTFQKFGRVTDAR 159
Query: 173 VMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSSD 232
V+ +TG+S+G+GFV+F ++DA++A+ + G+ L R I+ NW T N K
Sbjct: 160 VLKFTQTGKSKGYGFVTFIRKEDAETAMQMMNGEKLEGRNIKVNWVT---SNIASKTEQP 216
Query: 233 AKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIE 292
+S E+ N E + Q TVY+GN+ V DL + G+ IE
Sbjct: 217 KRSYDEINN---------------ETSSQNCTVYIGNIPKNVESDDLKQLLAEYGS--IE 259
Query: 293 EVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWG 338
EVR+ +DKG+ F+++S H A AI M N + G ++CSWG
Sbjct: 260 EVRLNKDKGYAFIKFSKHESATSAILMCN---GKIINGSTLRCSWG 302
Score = 46.6 bits (109), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSSYGFIHYFDRRSAAMAILSLNGR 117
+VY+GNI V L+++ + G +E +L KDK Y FI + SA AIL NG+
Sbjct: 233 TVYIGNIPKNVESDDLKQLLAEYGSIEEVRL-NKDKG-YAFIKFSKHESATSAILMCNGK 290
Query: 118 HLFGQPIKVNWAYAS 132
+ G ++ +W S
Sbjct: 291 IINGSTLRCSWGRES 305
>gi|119223939|gb|AAI26843.1| TIAL1 protein [Bos taurus]
Length = 279
Score = 185 bits (469), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 109/271 (40%), Positives = 162/271 (59%), Gaps = 22/271 (8%)
Query: 81 GPVEGCKLIRKDKSS--YGFIHYFDRRSAAMAILSLNGRHLFGQPIKVNWAYA-SGQRED 137
GP + CK+I + S+ Y F+ +++ R AA A+ ++NGR + G+ +KVNWA S Q++D
Sbjct: 1 GPCKSCKMITEHTSNDPYCFVEFYEHRDAAAALAAMNGRKILGKEVKVNWATTPSSQKKD 60
Query: 138 TSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQ 197
TS HF++FVGDLSPE+T + + F+ + SDARV+ D TG+S+G+GFVSF N+ DA+
Sbjct: 61 TSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAE 120
Query: 198 SAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPE 257
+AI + G+WLG RQIR NWAT+ + Q ++ K + ++ N +P+
Sbjct: 121 NAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQENNTKQL---------RFEDVVNQSSPK 171
Query: 258 NNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAI 317
N TVY G +A +T + + F G I E+RV +KG+ FVR+STH AA AI
Sbjct: 172 N----CTVYCGGIASGLTDQLMRQTFSPFGQ--IMEIRVFPEKGYSFVRFSTHESAAHAI 225
Query: 318 QMGNTTQSSYLFGKQMKCSWGSKPTPPGTSS 348
N T + G +KC WG K +P T +
Sbjct: 226 VSVNGTT---IEGHVVKCYWG-KESPDMTKN 252
>gi|148666753|gb|EDK99169.1| cytotoxic granule-associated RNA binding protein 1, isoform CRA_c
[Mus musculus]
Length = 293
Score = 185 bits (469), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 104/253 (41%), Positives = 153/253 (60%), Gaps = 18/253 (7%)
Query: 57 RSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRRSAAMAILSL 114
+++YVGN+ VTE L+ ++FS GP + CK+I + Y F+ + + R AA A+ ++
Sbjct: 15 KTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFHEHRHAAAALAAM 74
Query: 115 NGRHLFGQPIKVNWAYA-SGQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARV 173
NGR + G+ +KVNWA S Q++DTS HF++FVGDLSPE+T + A F+ + SDARV
Sbjct: 75 NGRKIMGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKAAFAPFGRISDARV 134
Query: 174 MWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSSDA 233
+ D TG+S+G+GFVSF N+ DA++AI + G+WLG RQIR NWAT+ + S+
Sbjct: 135 VKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAPKSTYESNT 194
Query: 234 KSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEE 293
K + S D E + +P N TVY G + +T+ + + F G I E
Sbjct: 195 KQL-------SYD--EVVSQSSPNN----CTVYCGGVTSGLTEQLMRQTFSPFGQ--IME 239
Query: 294 VRVQRDKGFGFVR 306
+RV DKG+ FVR
Sbjct: 240 IRVFPDKGYSFVR 252
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 99/205 (48%), Gaps = 42/205 (20%)
Query: 144 IFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDL 203
++VG+LS +VT+A + FS C + +++ D T + + FV F + A +A+ +
Sbjct: 17 LYVGNLSRDVTEALILQLFSQIGPCKNCKMIMD--TAGNDPYCFVEFHEHRHAAAALAAM 74
Query: 204 TGKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYT 263
G+ + ++++ NWAT S K+T+N +
Sbjct: 75 NGRKIMGKEVKVNWATT----------------------PSSQKKDTSN---------HF 103
Query: 264 TVYVGNLAPEVTQLDLHRHFHSLG----AGVIEEVRVQRDKGFGFVRYSTHAEAALAI-Q 318
V+VG+L+PE+T D+ F G A V++++ + KG+GFV + +A AI Q
Sbjct: 104 HVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQ 163
Query: 319 MGNTTQSSYLFGKQMKCSWGSKPTP 343
MG +L G+Q++ +W ++ P
Sbjct: 164 MG----GQWLGGRQIRTNWATRKPP 184
>gi|259648115|dbj|BAI40365.1| TIA-1 homologue [Bombyx mori]
Length = 402
Score = 185 bits (469), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 106/292 (36%), Positives = 163/292 (55%), Gaps = 16/292 (5%)
Query: 52 DPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRK-DKSSYGFIHYFDRRSAAMA 110
D S +++YVGN+ VTE L +F G V+GCK+IR+ Y F+ + +A A
Sbjct: 3 DESHPKTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDPYAFLEFTCHTAAVTA 62
Query: 111 ILSLNGRHLFGQPIKVNWAYASGQ--REDTSGHFNIFVGDLSPEVTDATLFACFSVYPSC 168
+ ++N R + + +KVNWA + G + DTS H +IFVGDLSPE+ L F+ +
Sbjct: 63 LAAMNKRVVLDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEI 122
Query: 169 SDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDK 228
S+ R++ D +T +S+G+ FVSF + DA++AI + G+WLGSR IR NW+T+
Sbjct: 123 SNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAMNGQWLGSRSIRTNWSTR-------- 174
Query: 229 QSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGA 288
AK V E S + T + +++P TTVY G + +L ++ S
Sbjct: 175 -KPPAKGVNEGAPSSKRAKQPTFDEVYNQSSPTNTTVYCGGFTSNIITEELMQNTFSQ-F 232
Query: 289 GVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSK 340
G I+++RV RDKG+ F+R++T AA AI + T+ S G +KC WG +
Sbjct: 233 GQIQDIRVFRDKGYAFIRFTTKEAAAHAIGATHNTEIS---GHTVKCFWGKE 281
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/225 (20%), Positives = 97/225 (43%), Gaps = 35/225 (15%)
Query: 49 PGFDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKS----SYGFIHYFDR 104
P D S ++VG++ ++ +L+E F+ G + C+++R ++ Y F+ + +
Sbjct: 88 PKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKK 147
Query: 105 RSAAMAILSLNGRHLFGQPIKVNWAY----ASGQRE-------------------DTSGH 141
A AI ++NG+ L + I+ NW+ A G E + +
Sbjct: 148 ADAEAAIQAMNGQWLGSRSIRTNWSTRKPPAKGVNEGAPSSKRAKQPTFDEVYNQSSPTN 207
Query: 142 FNIFVGDLSPE-VTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAI 200
++ G + +T+ + FS + D RV R +G+ F+ F ++ A AI
Sbjct: 208 TTVYCGGFTSNIITEELMQNTFSQFGQIQDIRVF------RDKGYAFIRFTTKEAAAHAI 261
Query: 201 NDLTGKWLGSRQIRCNWATK-GAGNNEDKQSSDAKSVVELTNGSS 244
+ ++C W + G N+ + ++D+ S V +G++
Sbjct: 262 GATHNTEISGHTVKCFWGKENGGAENQVRHTADSNSTVPDQSGNN 306
>gi|255760011|ref|NP_001157551.1| nucleolysin TIA-1 isoform 3 [Mus musculus]
gi|23271442|gb|AAH23813.1| Tia1 protein [Mus musculus]
Length = 285
Score = 185 bits (469), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 104/253 (41%), Positives = 153/253 (60%), Gaps = 18/253 (7%)
Query: 57 RSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRRSAAMAILSL 114
+++YVGN+ VTE L+ ++FS GP + CK+I + Y F+ + + R AA A+ ++
Sbjct: 7 KTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFHEHRHAAAALAAM 66
Query: 115 NGRHLFGQPIKVNWAYA-SGQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARV 173
NGR + G+ +KVNWA S Q++DTS HF++FVGDLSPE+T + A F+ + SDARV
Sbjct: 67 NGRKIMGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKAAFAPFGRISDARV 126
Query: 174 MWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSSDA 233
+ D TG+S+G+GFVSF N+ DA++AI + G+WLG RQIR NWAT+ + S+
Sbjct: 127 VKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAPKSTYESNT 186
Query: 234 KSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEE 293
K + S D E + +P N TVY G + +T+ + + F G I E
Sbjct: 187 KQL-------SYD--EVVSQSSPNN----CTVYCGGVTSGLTEQLMRQTFSPFGQ--IME 231
Query: 294 VRVQRDKGFGFVR 306
+RV DKG+ FVR
Sbjct: 232 IRVFPDKGYSFVR 244
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 99/205 (48%), Gaps = 42/205 (20%)
Query: 144 IFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDL 203
++VG+LS +VT+A + FS C + +++ D T + + FV F + A +A+ +
Sbjct: 9 LYVGNLSRDVTEALILQLFSQIGPCKNCKMIMD--TAGNDPYCFVEFHEHRHAAAALAAM 66
Query: 204 TGKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYT 263
G+ + ++++ NWAT S K+T+N +
Sbjct: 67 NGRKIMGKEVKVNWATT----------------------PSSQKKDTSN---------HF 95
Query: 264 TVYVGNLAPEVTQLDLHRHFHSLG----AGVIEEVRVQRDKGFGFVRYSTHAEAALAI-Q 318
V+VG+L+PE+T D+ F G A V++++ + KG+GFV + +A AI Q
Sbjct: 96 HVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQ 155
Query: 319 MGNTTQSSYLFGKQMKCSWGSKPTP 343
MG +L G+Q++ +W ++ P
Sbjct: 156 MG----GQWLGGRQIRTNWATRKPP 176
>gi|38141765|dbj|BAD00701.1| TIA-1 homologue [Bombyx mori]
Length = 388
Score = 185 bits (469), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 106/292 (36%), Positives = 163/292 (55%), Gaps = 16/292 (5%)
Query: 52 DPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRK-DKSSYGFIHYFDRRSAAMA 110
D S +++YVGN+ VTE L +F G V+GCK+IR+ Y F+ + +A A
Sbjct: 3 DESHPKTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDPYAFLEFTCHTAAVTA 62
Query: 111 ILSLNGRHLFGQPIKVNWAYASGQ--REDTSGHFNIFVGDLSPEVTDATLFACFSVYPSC 168
+ ++N R + + +KVNWA + G + DTS H +IFVGDLSPE+ L F+ +
Sbjct: 63 LAAMNKRVVLDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEI 122
Query: 169 SDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDK 228
S+ R++ D +T +S+G+ FVSF + DA++AI + G+WLGSR IR NW+T+
Sbjct: 123 SNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAMNGQWLGSRSIRTNWSTR-------- 174
Query: 229 QSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGA 288
AK V E S + T + +++P TTVY G + +L ++ S
Sbjct: 175 -KPPAKGVNEGAPSSKRAKQPTFDEVYNQSSPTNTTVYCGGFTSNIITEELMQNTFSQ-F 232
Query: 289 GVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSK 340
G I+++RV RDKG+ F+R++T AA AI + T+ S G +KC WG +
Sbjct: 233 GQIQDIRVFRDKGYAFIRFTTKEAAAHAIGATHNTEIS---GHTVKCFWGKE 281
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 47/215 (21%), Positives = 89/215 (41%), Gaps = 36/215 (16%)
Query: 49 PGFDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKS----SYGFIHYFDR 104
P D S ++VG++ ++ +L+E F+ G + C+++R ++ Y F+ + +
Sbjct: 88 PKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKK 147
Query: 105 RSAAMAILSLNGRHLFGQPIKVNWAY----ASGQRE-------------------DTSGH 141
A AI ++NG+ L + I+ NW+ A G E + +
Sbjct: 148 ADAEAAIQAMNGQWLGSRSIRTNWSTRKPPAKGVNEGAPSSKRAKQPTFDEVYNQSSPTN 207
Query: 142 FNIFVGDLSPE-VTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAI 200
++ G + +T+ + FS + D RV R +G+ F+ F ++ A AI
Sbjct: 208 TTVYCGGFTSNIITEELMQNTFSQFGQIQDIRVF------RDKGYAFIRFTTKEAAAHAI 261
Query: 201 NDLTGKWLGSRQIRCNWATK--GAGNNEDKQSSDA 233
+ ++C W + GA N SS A
Sbjct: 262 GATHNTEISGHTVKCFWGKENGGAENQSGNNSSAA 296
>gi|325303220|tpg|DAA34696.1| TPA_inf: apoptosis-promoting RNA-binding protein TIA-1/TIAR
[Amblyomma variegatum]
Length = 374
Score = 184 bits (466), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 108/277 (38%), Positives = 157/277 (56%), Gaps = 17/277 (6%)
Query: 81 GPVEGCKLIRK-DKSSYGFIHYFDRRSAAMAILSLNGRHLFGQPIKVNWAYASGQ--RED 137
G V+GCK+I + Y F+ + D +SAA A+L++N R FG+ +KVNWA + G + D
Sbjct: 2 GQVKGCKIIHEPGNDPYCFVEFSDHQSAASALLAMNKRLCFGKEMKVNWATSPGNTPKLD 61
Query: 138 TSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQ 197
TS H +IFVGDLSPE+ L F+ + SD RV+ D +T +S+G+GFVSF + DA+
Sbjct: 62 TSKHHHIFVGDLSPEIETTQLRDAFAPFGDISDCRVVRDPQTLKSKGYGFVSFVKKADAE 121
Query: 198 SAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPE 257
+AI + G+WLGSR IR NWAT+ N + D + T + D E N +P
Sbjct: 122 NAIGTMNGQWLGSRAIRTNWATRKPPANRTQAEVD---ITTSTKPLTFD--EVYNQSSPT 176
Query: 258 NNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAI 317
N TVY G + +++ + + F S GA I+E+RV +DKG+ F++ T A AI
Sbjct: 177 N----CTVYCGGITQGLSEELMQKTFSSYGA--IQEIRVFKDKGYAFIKVGTKEAATHAI 230
Query: 318 QMGNTTQSSYLFGKQMKCSWGSKPTPPGTSSNPLPPP 354
T +S + G+ +KCSWG + T P P P
Sbjct: 231 V---ATHNSDVNGQTVKCSWGKEATDPNNQQQPQVSP 264
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/208 (19%), Positives = 86/208 (41%), Gaps = 33/208 (15%)
Query: 49 PGFDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKS----SYGFIHYFDR 104
P D S ++VG++ ++ L++ F+ G + C+++R ++ YGF+ + +
Sbjct: 58 PKLDTSKHHHIFVGDLSPEIETTQLRDAFAPFGDISDCRVVRDPQTLKSKGYGFVSFVKK 117
Query: 105 RSAAMAILSLNGRHLFGQPIKVNWAYASGQREDTSGHFNI-------------------- 144
A AI ++NG+ L + I+ NWA T +I
Sbjct: 118 ADAENAIGTMNGQWLGSRAIRTNWATRKPPANRTQAEVDITTSTKPLTFDEVYNQSSPTN 177
Query: 145 ---FVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAIN 201
+ G ++ +++ + FS Y + + RV D +G+ F+ ++ A AI
Sbjct: 178 CTVYCGGITQGLSEELMQKTFSSYGAIQEIRVFKD------KGYAFIKVGTKEAATHAIV 231
Query: 202 DLTGKWLGSRQIRCNWATKGAGNNEDKQ 229
+ + ++C+W + N +Q
Sbjct: 232 ATHNSDVNGQTVKCSWGKEATDPNNQQQ 259
>gi|391330636|ref|XP_003739762.1| PREDICTED: nucleolysin TIAR-like [Metaseiulus occidentalis]
Length = 364
Score = 183 bits (465), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 107/297 (36%), Positives = 165/297 (55%), Gaps = 29/297 (9%)
Query: 57 RSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS-YGFIHYFDRRSAAMAILSLN 115
R++YVGN+ + VTE L+ +FS G ++GCK+I + S Y F+ + + A+ AI ++N
Sbjct: 13 RTLYVGNLDSGVTEDLVCALFSQMGQIKGCKIIHEPGSDPYCFVEFVNHSDASSAITAMN 72
Query: 116 GRHLFGQPIKVNWAYASGQ-----REDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSD 170
R G+ ++VNWA ++ Q R DTS H +IFVGDLSP++ + L FS + SD
Sbjct: 73 ARMCLGRELRVNWASSAIQQQTPHRPDTSKHHHIFVGDLSPQIETSDLREAFSPFGEISD 132
Query: 171 ARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQS 230
RV+ D T +S+G+GFVSF N+QDA++AI+ + G WLGSR IR NWA++ + E
Sbjct: 133 CRVVKDATTQKSKGYGFVSFTNKQDAENAIHTMDGSWLGSRAIRTNWASRKPNHKE---- 188
Query: 231 SDAKSVVELTNGSSEDGKE---TTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRH-FHSL 286
GS G + +++P TVY G L + D R F
Sbjct: 189 ----------TGSYIGGHHRALNYDEVFAQSSPSNCTVYCGGLNQMASSEDFLRQAFDEF 238
Query: 287 GAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSKPTP 343
G I ++R+ +DKG+ F+++++ A AI +S + G+ +KCSWG + P
Sbjct: 239 GE--IVDIRLFKDKGYAFIKFNSKESACRAIV---ARHNSDIGGQAVKCSWGKEQEP 290
>gi|357610697|gb|EHJ67099.1| TIA-1-related RNA binding protein [Danaus plexippus]
Length = 388
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 121/313 (38%), Positives = 173/313 (55%), Gaps = 24/313 (7%)
Query: 52 DPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRK-DKSSYGFIHYFDRRSAAMA 110
D S +++YVGN+ VTE L +F G V+GCK+IR+ Y F+ + + SAA A
Sbjct: 3 DESHPKTLYVGNLDASVTEEFLCALFGQIGEVKGCKIIREPGNDPYAFLEFTNHASAATA 62
Query: 111 ILSLNGRHLFGQPIKVNWAYASGQ--REDTSGHFNIFVGDLSPEVTDATLFACFSVYPSC 168
+ ++N R + +KVNWA + G + DTS H +IFVGDLSPE+ L F+ +
Sbjct: 63 LAAMNRRVFLEKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETHILREAFAPFGEI 122
Query: 169 SDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKG---AGNN 225
S+ R++ D +T +S+G+ FVSF + DA++AI + G+WLGSR IR NW+T+ G N
Sbjct: 123 SNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAMNGQWLGSRSIRTNWSTRKPPTKGPN 182
Query: 226 EDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHS 285
E SS K V + T E N +P N TTVY G V +L + S
Sbjct: 183 EGAPSS--KRVKQPTF------DEVYNQSSPTN----TTVYCGGFTSNVITEELMQSTFS 230
Query: 286 LGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSKPTPPG 345
G I++VRV RDKG+ F+R++T AA AI+ + T+ S G +KC WG + G
Sbjct: 231 Q-FGQIQDVRVFRDKGYAFIRFTTKEAAAHAIEATHNTEIS---GHTVKCFWGKENG--G 284
Query: 346 TSSNPLPPPAAAP 358
T + P AAP
Sbjct: 285 TENQSTTNPPAAP 297
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/203 (19%), Positives = 84/203 (41%), Gaps = 34/203 (16%)
Query: 49 PGFDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKS----SYGFIHYFDR 104
P D S ++VG++ ++ +L+E F+ G + C+++R ++ Y F+ + +
Sbjct: 88 PKTDTSNHHHIFVGDLSPEIETHILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKK 147
Query: 105 RSAAMAILSLNGRHLFGQPIKVNWA-----------------------YASGQREDTSGH 141
A AI ++NG+ L + I+ NW+ + + + +
Sbjct: 148 ADAEAAIQAMNGQWLGSRSIRTNWSTRKPPTKGPNEGAPSSKRVKQPTFDEVYNQSSPTN 207
Query: 142 FNIFVGDLSPEV-TDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAI 200
++ G + V T+ + + FS + D RV R +G+ F+ F ++ A AI
Sbjct: 208 TTVYCGGFTSNVITEELMQSTFSQFGQIQDVRVF------RDKGYAFIRFTTKEAAAHAI 261
Query: 201 NDLTGKWLGSRQIRCNWATKGAG 223
+ ++C W + G
Sbjct: 262 EATHNTEISGHTVKCFWGKENGG 284
>gi|17531965|ref|NP_495121.1| Protein TIAR-1, isoform a [Caenorhabditis elegans]
gi|373219010|emb|CCD65015.1| Protein TIAR-1, isoform a [Caenorhabditis elegans]
Length = 408
Score = 182 bits (462), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 106/287 (36%), Positives = 164/287 (57%), Gaps = 27/287 (9%)
Query: 57 RSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS-YGFIHYFDRRSAAMAILSLN 115
R++YVGN+ + VTE + +F+ G V K+I + Y F+ + D A+ A+ ++N
Sbjct: 46 RTLYVGNLDSTVTEDFIATLFNQIGSVTKTKVIFDGSNDPYAFVEFSDHGQASQALQTMN 105
Query: 116 GRHLFGQPIKVNWAYASGQRE---DTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDAR 172
R L + +KVNWA GQ++ DT+ HF++FVGDLS EV + L F + SDA+
Sbjct: 106 KRLLLDREMKVNWAVEPGQQQSKIDTTRHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAK 165
Query: 173 VMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSSD 232
V+ D T +S+G+GFVS+ +++A+ AI + G+WLG R IR NWAT+ G+ E +
Sbjct: 166 VIRDTNTTKSKGYGFVSYPKREEAERAIEQMNGQWLGRRTIRTNWATRKPGDQEKPSHYN 225
Query: 233 AKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIE 292
KS E+ N +S D T+VYVGN+A +T+ ++ + F S G I
Sbjct: 226 EKSYDEIYNQTSGDN---------------TSVYVGNIAS-LTEDEIRQGFASFGR--IT 267
Query: 293 EVRVQRDKGFGFVRYSTHAEAALAI-QMGNTTQSSYLFGKQMKCSWG 338
EVR+ + +G+ FV++ AA AI QM N + G+ ++CSWG
Sbjct: 268 EVRIFKMQGYAFVKFDNKDAAAKAIVQMNNQD----VGGQLVRCSWG 310
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 87/184 (47%), Gaps = 28/184 (15%)
Query: 59 VYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS----YGFIHYFDRRSAAMAILSL 114
V+VG++ ++V L+E F G V K+IR ++ YGF+ Y R A AI +
Sbjct: 137 VFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQM 196
Query: 115 NGRHLFGQPIKVNWAYASGQREDTSGHFN-----------------IFVGDLSPEVTDAT 157
NG+ L + I+ NWA ++ H+N ++VG+++ +T+
Sbjct: 197 NGQWLGRRTIRTNWATRKPGDQEKPSHYNEKSYDEIYNQTSGDNTSVYVGNIAS-LTEDE 255
Query: 158 LFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNW 217
+ F+ + ++ R+ + +G+ FV F N+ A AI + + +G + +RC+W
Sbjct: 256 IRQGFASFGRITEVRIF------KMQGYAFVKFDNKDAAAKAIVQMNNQDVGGQLVRCSW 309
Query: 218 ATKG 221
G
Sbjct: 310 GKTG 313
>gi|226528044|dbj|BAH56564.1| TIA-1-related RNA binding protein [Spodoptera litura]
Length = 388
Score = 182 bits (462), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 117/328 (35%), Positives = 176/328 (53%), Gaps = 20/328 (6%)
Query: 52 DPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRK-DKSSYGFIHYFDRRSAAMA 110
D S +++YVGN+ VTE + +F G V+GCK+IR+ Y F+ + +AA A
Sbjct: 3 DESHPKTLYVGNLDASVTEVFICTLFGQIGEVKGCKIIREPGNDPYAFLEFTSHTAAATA 62
Query: 111 ILSLNGRHLFGQPIKVNWAYASGQ--REDTSGHFNIFVGDLSPEVTDATLFACFSVYPSC 168
+ ++N R + + +KVNWA + G + DTS H +IFVGDLSPE+ L F+ +
Sbjct: 63 LAAMNKRVVLDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETHILRDAFAPFGEI 122
Query: 169 SDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDK 228
S+ R++ D +T +S+G+ FVSF + DA++AI + G+WLGSR IR NW+T+ + ++
Sbjct: 123 SNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAMNGQWLGSRSIRTNWSTRKPPSKPNE 182
Query: 229 QSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGA 288
+ +K + T E N +P N TTVY G V DL ++ S
Sbjct: 183 GAPSSKRAKQPT------FDEVYNQSSPTN----TTVYCGGFTSNVITEDLMQNTFSQ-F 231
Query: 289 GVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSKPTPPGTSS 348
G I++VRV RDKG+ F+R++T AA AI+ + T+ S G +KC WG + G
Sbjct: 232 GQIQDVRVFRDKGYAFIRFTTKEAAAHAIEATHNTEIS---GHIVKCFWGKE---NGGGD 285
Query: 349 NPLPPPAAAPIPGLSAADLLAYERQIAM 376
N A A P + A Y Q M
Sbjct: 286 NQSTNNATAAPPAMGAQTQYPYPYQQGM 313
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 42/213 (19%), Positives = 90/213 (42%), Gaps = 34/213 (15%)
Query: 49 PGFDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKS----SYGFIHYFDR 104
P D S ++VG++ ++ +L++ F+ G + C+++R ++ Y F+ + +
Sbjct: 88 PKTDTSNHHHIFVGDLSPEIETHILRDAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKK 147
Query: 105 RSAAMAILSLNGRHLFGQPIKVNWA----------------------YASGQREDTSGHF 142
A AI ++NG+ L + I+ NW+ + + + +
Sbjct: 148 ADAEAAIQAMNGQWLGSRSIRTNWSTRKPPSKPNEGAPSSKRAKQPTFDEVYNQSSPTNT 207
Query: 143 NIFVGDLSPEV-TDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAIN 201
++ G + V T+ + FS + D RV R +G+ F+ F ++ A AI
Sbjct: 208 TVYCGGFTSNVITEDLMQNTFSQFGQIQDVRVF------RDKGYAFIRFTTKEAAAHAIE 261
Query: 202 DLTGKWLGSRQIRCNWATK-GAGNNEDKQSSDA 233
+ ++C W + G G+N+ ++ A
Sbjct: 262 ATHNTEISGHIVKCFWGKENGGGDNQSTNNATA 294
>gi|308493359|ref|XP_003108869.1| hypothetical protein CRE_11982 [Caenorhabditis remanei]
gi|308247426|gb|EFO91378.1| hypothetical protein CRE_11982 [Caenorhabditis remanei]
Length = 404
Score = 182 bits (461), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 105/287 (36%), Positives = 163/287 (56%), Gaps = 27/287 (9%)
Query: 57 RSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS-YGFIHYFDRRSAAMAILSLN 115
R++YVGN+ V+E L+ +F+ G V K+I + Y F+ + D A+ A+ ++N
Sbjct: 44 RTLYVGNLDPSVSEDLIATLFNQIGSVTKTKVIFDGANDPYAFVEFLDHSQASQALQTMN 103
Query: 116 GRHLFGQPIKVNWAYASGQ---REDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDAR 172
R L + +KVNWA GQ + DT+ HF++FVGDLS EV + L F + SDA+
Sbjct: 104 KRLLLDREMKVNWAVEPGQQPSKVDTTRHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAK 163
Query: 173 VMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSSD 232
V+ D T +S+G+GFVS+ +++A+ AI + G+WLG R IR NWAT+ G+ E +
Sbjct: 164 VIRDTNTTKSKGYGFVSYPKREEAERAIEQMNGQWLGRRTIRTNWATRKPGDQEKPTHYN 223
Query: 233 AKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIE 292
KS E+ N +S D T+VYVGN+A +++ ++ + F S G I
Sbjct: 224 EKSFDEIYNQTSGDN---------------TSVYVGNIA-NLSEDEIRQAFASYGR--IS 265
Query: 293 EVRVQRDKGFGFVRYSTHAEAALAI-QMGNTTQSSYLFGKQMKCSWG 338
EVR+ + +G+ FV++ AA AI QM N + G+ ++CSWG
Sbjct: 266 EVRIFKMQGYAFVKFDNKDAAAKAIVQMNNQE----VGGQLVRCSWG 308
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 94/204 (46%), Gaps = 31/204 (15%)
Query: 39 IEPIPSGNLPPGFDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--- 95
+EP G P D + V+VG++ ++V L+E F G V K+IR ++
Sbjct: 118 VEP---GQQPSKVDTTRHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSK 174
Query: 96 -YGFIHYFDRRSAAMAILSLNGRHLFGQPIKVNWAYASGQREDTSGHFN----------- 143
YGF+ Y R A AI +NG+ L + I+ NWA ++ H+N
Sbjct: 175 GYGFVSYPKREEAERAIEQMNGQWLGRRTIRTNWATRKPGDQEKPTHYNEKSFDEIYNQT 234
Query: 144 ------IFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQ 197
++VG+++ +++ + F+ Y S+ R+ + +G+ FV F N+ A
Sbjct: 235 SGDNTSVYVGNIA-NLSEDEIRQAFASYGRISEVRIF------KMQGYAFVKFDNKDAAA 287
Query: 198 SAINDLTGKWLGSRQIRCNWATKG 221
AI + + +G + +RC+W G
Sbjct: 288 KAIVQMNNQEVGGQLVRCSWGKTG 311
>gi|170592088|ref|XP_001900801.1| RNA recognition motif. [Brugia malayi]
gi|158591668|gb|EDP30272.1| RNA recognition motif [Brugia malayi]
Length = 421
Score = 181 bits (458), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 109/294 (37%), Positives = 158/294 (53%), Gaps = 32/294 (10%)
Query: 57 RSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS-YGFIHYFDRRSAAMAILSLN 115
R+VYVGN+ +TE + +F G V K+I + Y F+ + D +AA A+ ++N
Sbjct: 74 RTVYVGNLDPSITEDFITTLFGQIGAVTKTKVIFDGTNDPYAFVEFADHYTAAQALQAMN 133
Query: 116 GRHLFGQPIKVNWAYASGQ--REDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARV 173
R L + +KVNWA G + DTS HF++FVGDLSPEV + L F+ + SDA+V
Sbjct: 134 KRVLLEKEMKVNWATEPGSQAKVDTSKHFHVFVGDLSPEVDNKALKDAFAPFGEVSDAKV 193
Query: 174 MWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATK-----GAGNNEDK 228
+ D T +S+G+GFVS+ +++A+ AI + G+WLG R IR NWAT+ GAG+ +
Sbjct: 194 IRDATTLKSKGYGFVSYPKREEAERAIEQMNGQWLGRRTIRTNWATRKPTGTGAGDGQ-- 251
Query: 229 QSSDAKSVVELTNGSSE-DGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLG 287
G SE + + N P+N T+VYVGN+ DL F G
Sbjct: 252 ------------YGRSELNYDDVYNQTGPDN----TSVYVGNVNSSANDEDLRAAFDKFG 295
Query: 288 AGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSKP 341
I EVR+ + +G+ FVR+ A AI N + L G+ +KCSWG P
Sbjct: 296 R--ILEVRIFKSQGYAFVRFDKKDSACNAICKMNGQE---LCGQNIKCSWGRTP 344
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 85/190 (44%), Gaps = 30/190 (15%)
Query: 52 DPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRK----DKSSYGFIHYFDRRSA 107
D S V+VG++ +V L++ F+ G V K+IR YGF+ Y R A
Sbjct: 157 DTSKHFHVFVGDLSPEVDNKALKDAFAPFGEVSDAKVIRDATTLKSKGYGFVSYPKREEA 216
Query: 108 AMAILSLNGRHLFGQPIKVNWAY--------ASGQREDTSGHFN------------IFVG 147
AI +NG+ L + I+ NWA GQ + +++ ++VG
Sbjct: 217 ERAIEQMNGQWLGRRTIRTNWATRKPTGTGAGDGQYGRSELNYDDVYNQTGPDNTSVYVG 276
Query: 148 DLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKW 207
+++ D L A F + + R+ +S+G+ FV F + A +AI + G+
Sbjct: 277 NVNSSANDEDLRAAFDKFGRILEVRIF------KSQGYAFVRFDKKDSACNAICKMNGQE 330
Query: 208 LGSRQIRCNW 217
L + I+C+W
Sbjct: 331 LCGQNIKCSW 340
>gi|402587661|gb|EJW81596.1| nucleolysin TIAR [Wuchereria bancrofti]
Length = 440
Score = 181 bits (458), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 112/305 (36%), Positives = 162/305 (53%), Gaps = 36/305 (11%)
Query: 50 GFDPSTC----RSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS-YGFIHYFDR 104
GFD + R+VYVGN+ +TE + +F G V K+I + Y F+ + D
Sbjct: 82 GFDTGSEDHQPRTVYVGNLDPSITEDFITTLFGQIGAVTKTKVIFDGTNDPYAFVEFADH 141
Query: 105 RSAAMAILSLNGRHLFGQPIKVNWAYASGQ--REDTSGHFNIFVGDLSPEVTDATLFACF 162
+AA A+ ++N R L + +KVNWA G + DTS HF++FVGDLSPEV + L F
Sbjct: 142 YTAAQALQAMNKRVLLEKEMKVNWATEPGSQAKVDTSKHFHVFVGDLSPEVDNKALKDAF 201
Query: 163 SVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATK-- 220
+ + SDA+V+ D T +S+G+GFVS+ +++A+ AI + G+WLG R IR NWAT+
Sbjct: 202 APFGEVSDAKVIRDATTLKSKGYGFVSYPKREEAERAIEQMNGQWLGRRTIRTNWATRKP 261
Query: 221 ---GAGNNEDKQSSDAKSVVELTNGSSE-DGKETTNTEAPENNPQYTTVYVGNLAPEVTQ 276
GAG+ + G SE + + N P+N T+VYVGN+
Sbjct: 262 TGTGAGDGQ--------------YGRSELNYDDVYNQTGPDN----TSVYVGNVNSNAND 303
Query: 277 LDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCS 336
DL F G I EVR+ + +G+ FVR+ A AI N + L G+ +KCS
Sbjct: 304 EDLRAAFDKFGR--ILEVRIFKSQGYAFVRFDKKDSACNAICKMNGQE---LCGQNIKCS 358
Query: 337 WGSKP 341
WG P
Sbjct: 359 WGRTP 363
>gi|118918389|ref|NP_001036895.2| TIA1 cytotoxic granule-associated RNA binding protein [Bombyx mori]
gi|111608113|gb|ABH10800.1| nucleolysin TIAR protein [Bombyx mori]
Length = 402
Score = 181 bits (458), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 107/292 (36%), Positives = 165/292 (56%), Gaps = 16/292 (5%)
Query: 52 DPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRK-DKSSYGFIHYFDRRSAAMA 110
D S +++YVGN+ VTE L +F G V+GCK+IR+ Y F+ + +AA A
Sbjct: 3 DESHPKTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDPYAFLEFTCHTAAATA 62
Query: 111 ILSLNGRHLFGQPIKVNWAYASGQ--REDTSGHFNIFVGDLSPEVTDATLFACFSVYPSC 168
+ ++N R + + +KVNWA + G + DTS H +IFVGDLSPE+ L F+ +
Sbjct: 63 LAAMNKRVVLDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEI 122
Query: 169 SDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDK 228
S+ R++ D +T +S+G+ FVSF + DA++AI + G+WLGSR IR NW+T+
Sbjct: 123 SNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAMNGQWLGSRSIRTNWSTR-------- 174
Query: 229 QSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGA 288
AK V E S + T + +++P TTVY G + +L ++ S
Sbjct: 175 -KPPAKGVNEGAPSSKRAKQPTFDEVYNQSSPTNTTVYCGGFTSNIITEELMQNTFSQ-F 232
Query: 289 GVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSK 340
G I+++RV RDKG+ F+R++T AA AI+ + T+ S G +KC WG +
Sbjct: 233 GQIQDIRVFRDKGYAFIRFTTKEAAAHAIEATHNTEIS---GHTVKCFWGKE 281
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/225 (20%), Positives = 97/225 (43%), Gaps = 35/225 (15%)
Query: 49 PGFDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKS----SYGFIHYFDR 104
P D S ++VG++ ++ +L+E F+ G + C+++R ++ Y F+ + +
Sbjct: 88 PKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKK 147
Query: 105 RSAAMAILSLNGRHLFGQPIKVNWAY----ASGQRE-------------------DTSGH 141
A AI ++NG+ L + I+ NW+ A G E + +
Sbjct: 148 ADAEAAIQAMNGQWLGSRSIRTNWSTRKPPAKGVNEGAPSSKRAKQPTFDEVYNQSSPTN 207
Query: 142 FNIFVGDLSPE-VTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAI 200
++ G + +T+ + FS + D RV R +G+ F+ F ++ A AI
Sbjct: 208 TTVYCGGFTSNIITEELMQNTFSQFGQIQDIRVF------RDKGYAFIRFTTKEAAAHAI 261
Query: 201 NDLTGKWLGSRQIRCNWATK-GAGNNEDKQSSDAKSVVELTNGSS 244
+ ++C W + G N+ + ++D+ S V +G++
Sbjct: 262 EATHNTEISGHTVKCFWGKENGGAENQVRHTADSNSTVPDQSGNN 306
>gi|259648117|dbj|BAI40366.1| TIA-1 homologue [Bombyx mori]
Length = 402
Score = 180 bits (457), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 107/292 (36%), Positives = 165/292 (56%), Gaps = 16/292 (5%)
Query: 52 DPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRK-DKSSYGFIHYFDRRSAAMA 110
D S +++YVGN+ VTE L +F G V+GCK+IR+ Y F+ + +AA A
Sbjct: 3 DESHPKTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDPYAFLEFTCHTAAATA 62
Query: 111 ILSLNGRHLFGQPIKVNWAYASGQ--REDTSGHFNIFVGDLSPEVTDATLFACFSVYPSC 168
+ ++N R + + +KVNWA + G + DTS H +IFVGDLSPE+ L F+ +
Sbjct: 63 LAAMNKRVVLDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEI 122
Query: 169 SDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDK 228
S+ R++ D +T +S+G+ FVSF + DA++AI + G+WLGSR IR NW+T+
Sbjct: 123 SNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAMNGQWLGSRSIRTNWSTR-------- 174
Query: 229 QSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGA 288
AK V E S + T + +++P TTVY G + +L ++ S
Sbjct: 175 -KPPAKGVNEGAPSSKRAKQPTFDEVYNQSSPTNTTVYCGGFTSNIITEELMQNTFSQ-F 232
Query: 289 GVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSK 340
G I+++RV RDKG+ F+R++T AA AI+ + T+ S G +KC WG +
Sbjct: 233 GQIQDIRVFRDKGYAFIRFTTKEAAAHAIEATHNTEIS---GHTVKCFWGKE 281
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/225 (20%), Positives = 97/225 (43%), Gaps = 35/225 (15%)
Query: 49 PGFDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKS----SYGFIHYFDR 104
P D S ++VG++ ++ +L+E F+ G + C+++R ++ Y F+ + +
Sbjct: 88 PKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKK 147
Query: 105 RSAAMAILSLNGRHLFGQPIKVNWAY----ASGQRE-------------------DTSGH 141
A AI ++NG+ L + I+ NW+ A G E + +
Sbjct: 148 ADAEAAIQAMNGQWLGSRSIRTNWSTRKPPAKGVNEGAPSSKRAKQPTFDEVYNQSSPTN 207
Query: 142 FNIFVGDLSPE-VTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAI 200
++ G + +T+ + FS + D RV R +G+ F+ F ++ A AI
Sbjct: 208 TTVYCGGFTSNIITEELMQNTFSQFGQIQDIRVF------RDKGYAFIRFTTKEAAAHAI 261
Query: 201 NDLTGKWLGSRQIRCNWATK-GAGNNEDKQSSDAKSVVELTNGSS 244
+ ++C W + G N+ + ++D+ S V +G++
Sbjct: 262 EATHNTEISGHTVKCFWGKENGGAENQVRHTADSNSTVPDQSGNN 306
>gi|393909208|gb|EFO19127.2| hypothetical protein LOAG_09365 [Loa loa]
Length = 421
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 108/294 (36%), Positives = 158/294 (53%), Gaps = 32/294 (10%)
Query: 57 RSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS-YGFIHYFDRRSAAMAILSLN 115
R+VYVGN+ +TE + +F G V K+I + Y F+ + D +AA A+ ++N
Sbjct: 74 RTVYVGNLDPSITEDFITTLFGQIGAVTKTKVIFDGTNDPYAFVEFADHYTAAQALQAMN 133
Query: 116 GRHLFGQPIKVNWAYASGQ--REDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARV 173
R L + +KVNWA G + DTS HF++FVGDLSPEV + L F+ + SDA+V
Sbjct: 134 KRVLLEKEMKVNWATEPGSQAKVDTSKHFHVFVGDLSPEVDNKALKDAFAPFGEVSDAKV 193
Query: 174 MWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATK-----GAGNNEDK 228
+ D T +S+G+GFVS+ +++A+ AI + G+WLG R IR NWAT+ GAG+ +
Sbjct: 194 IRDATTLKSKGYGFVSYPKREEAERAIEQMNGQWLGRRTIRTNWATRKPTGTGAGDGQ-- 251
Query: 229 QSSDAKSVVELTNGSSE-DGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLG 287
G +E + + N P+N T+VYVGN+ DL F G
Sbjct: 252 ------------YGRTELNYDDVYNQTGPDN----TSVYVGNVNSSANDEDLRAAFDKFG 295
Query: 288 AGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSKP 341
I EVR+ + +G+ FVR+ A AI N + L G+ +KCSWG P
Sbjct: 296 R--ILEVRIFKSQGYAFVRFDKKDSACNAICKMNGQE---LCGQNIKCSWGRTP 344
>gi|322795213|gb|EFZ18035.1| hypothetical protein SINV_11488 [Solenopsis invicta]
Length = 455
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 100/299 (33%), Positives = 164/299 (54%), Gaps = 31/299 (10%)
Query: 52 DPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRK-DKSSYGFIHYFDRRSAAMA 110
+ S R++YVGN+ T V+E LL +FS G V+GCK+IR+ Y F+ + + + AA A
Sbjct: 75 EESNPRTLYVGNLDTTVSEDLLCALFSQIGAVKGCKIIREPGNDPYAFVEFTNHQCAATA 134
Query: 111 ILSLNGRHLFGQPIKVNWAYASGQ--REDTSGHFNIFVGDLSPEVTDATLFACFSVYPSC 168
+ ++N R + +KVNWA + G + DTS H +IFVGDLSPE+ TL F+ +
Sbjct: 135 LAAMNKRSFLEKEMKVNWATSPGNQPKLDTSNHHHIFVGDLSPEIETQTLKEAFAPFGEI 194
Query: 169 SDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDK 228
S+ R++ D +T +S+G+ FVSF + +A++AIN + G+WLGSR IR NW+T+ +
Sbjct: 195 SNCRIVRDPQTLKSKGYAFVSFVKKSEAEAAINAMNGQWLGSRSIRTNWSTRKPPPPRSE 254
Query: 229 QSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTV-YVGNLAPEVTQLDLHRHFHSLG 287
+ + + + P Y V Y G +T + + F
Sbjct: 255 RPRHSNN----------------------SKPNYEEVLYCGGFTNGITDELIKKTFSPF- 291
Query: 288 AGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSKPTPPGT 346
G I+++RV +DKG+ F++++T A AI+ +T ++ + G +KC WG + P +
Sbjct: 292 -GTIQDIRVFKDKGYAFIKFTTKEAATHAIE---STHNTEINGSIVKCFWGKENGDPNS 346
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/192 (22%), Positives = 83/192 (43%), Gaps = 21/192 (10%)
Query: 49 PGFDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKS----SYGFIHYFDR 104
P D S ++VG++ ++ L+E F+ G + C+++R ++ Y F+ + +
Sbjct: 160 PKLDTSNHHHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKK 219
Query: 105 RSAAMAILSLNGRHLFGQPIKVNWA--YASGQREDTSGHFN---------IFVGDLSPEV 153
A AI ++NG+ L + I+ NW+ R + H N ++ G + +
Sbjct: 220 SEAEAAINAMNGQWLGSRSIRTNWSTRKPPPPRSERPRHSNNSKPNYEEVLYCGGFTNGI 279
Query: 154 TDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQI 213
TD + FS + + D RV D +G+ F+ F ++ A AI + +
Sbjct: 280 TDELIKKTFSPFGTIQDIRVFKD------KGYAFIKFTTKEAATHAIESTHNTEINGSIV 333
Query: 214 RCNWATKGAGNN 225
+C W + N
Sbjct: 334 KCFWGKENGDPN 345
>gi|312086091|ref|XP_003144941.1| hypothetical protein LOAG_09365 [Loa loa]
Length = 394
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 111/305 (36%), Positives = 162/305 (53%), Gaps = 36/305 (11%)
Query: 50 GFDPSTC----RSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS-YGFIHYFDR 104
GFD + R+VYVGN+ +TE + +F G V K+I + Y F+ + D
Sbjct: 36 GFDTGSEDHQPRTVYVGNLDPSITEDFITTLFGQIGAVTKTKVIFDGTNDPYAFVEFADH 95
Query: 105 RSAAMAILSLNGRHLFGQPIKVNWAYASGQ--REDTSGHFNIFVGDLSPEVTDATLFACF 162
+AA A+ ++N R L + +KVNWA G + DTS HF++FVGDLSPEV + L F
Sbjct: 96 YTAAQALQAMNKRVLLEKEMKVNWATEPGSQAKVDTSKHFHVFVGDLSPEVDNKALKDAF 155
Query: 163 SVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATK-- 220
+ + SDA+V+ D T +S+G+GFVS+ +++A+ AI + G+WLG R IR NWAT+
Sbjct: 156 APFGEVSDAKVIRDATTLKSKGYGFVSYPKREEAERAIEQMNGQWLGRRTIRTNWATRKP 215
Query: 221 ---GAGNNEDKQSSDAKSVVELTNGSSE-DGKETTNTEAPENNPQYTTVYVGNLAPEVTQ 276
GAG+ + G +E + + N P+N T+VYVGN+
Sbjct: 216 TGTGAGDGQ--------------YGRTELNYDDVYNQTGPDN----TSVYVGNVNSSAND 257
Query: 277 LDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCS 336
DL F G I EVR+ + +G+ FVR+ A AI N + L G+ +KCS
Sbjct: 258 EDLRAAFDKFGR--ILEVRIFKSQGYAFVRFDKKDSACNAICKMNGQE---LCGQNIKCS 312
Query: 337 WGSKP 341
WG P
Sbjct: 313 WGRTP 317
>gi|448111784|ref|XP_004201926.1| Piso0_001392 [Millerozyma farinosa CBS 7064]
gi|359464915|emb|CCE88620.1| Piso0_001392 [Millerozyma farinosa CBS 7064]
Length = 422
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 125/356 (35%), Positives = 175/356 (49%), Gaps = 62/356 (17%)
Query: 59 VYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKS----SYGFIHYFDRRSAAMAILSL 114
+YVG +H V+E +L+++FSS G V+ K + DK+ SY F+ + + SA +A+ +L
Sbjct: 74 LYVGGLHKSVSEDVLRDLFSSCGGVKSIKTL-NDKNRPGFSYAFVEFENTDSAELALRTL 132
Query: 115 NGRHLFGQPIKVNWAYASGQREDTSGH---FNIFVGDLSPEVTDATLFACFSVYPSCSDA 171
NGR + IK+NWAY S S FNIFVGDLSPEV D +L FS + S A
Sbjct: 133 NGRMVNNSVIKINWAYQSSAVSTASQQEPFFNIFVGDLSPEVDDESLHKAFSKFESLRQA 192
Query: 172 RVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKG--------AG 223
VMWD +T RSRG+GFVSF NQ DA+ A+ + G+W+G R IRCNWA+ AG
Sbjct: 193 HVMWDMQTSRSRGYGFVSFGNQVDAELALQTMNGEWIGGRAIRCNWASHKQFNNPKFRAG 252
Query: 224 NNEDKQSSD-------------------------AKSVVELTNGSSEDGKETTNTEAPEN 258
NN + +++ G+ + +P++
Sbjct: 253 NNRYPNHGNRQYRSFHANPMQPQLHNQPIMPGLQSQASTAYQPGAGNGNQSNIPIMSPQS 312
Query: 259 -------NPQYTT-VYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTH 310
P + T VY+GN+A Q DL + G I + + +KG FV Y +H
Sbjct: 313 FDIVLRQTPSWQTTVYLGNIAHFTQQTDLIPLLQNF--GFIVDFKFHPEKGCAFVNYDSH 370
Query: 311 AEAALAI-QMGNTTQSSYLFGKQMKCSWGSKPTPPGTSSNPLP----PPAAAPIPG 361
AALAI Q+ T + G+ +KC WG K PP P PP+ P PG
Sbjct: 371 ERAALAIVQLAGFT----INGRPLKCGWG-KERPPINQFQGFPRGVAPPSIYP-PG 420
Score = 41.2 bits (95), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 58/136 (42%), Gaps = 28/136 (20%)
Query: 9 QQQQQQQALMQQALLQQQSLYHPGLLAAPQIE-PIPSGNLPPGFD------PSTCRSVYV 61
Q Q Q +M Q + Y PG Q PI S P FD PS +VY+
Sbjct: 273 QPQLHNQPIMPGLQSQASTAYQPGAGNGNQSNIPIMS---PQSFDIVLRQTPSWQTTVYL 329
Query: 62 GNI--HTQVTE--PLLQE----VFSSTGPVEGCKLIRKDKSSYGFIHYFDRRSAAMAILS 113
GNI TQ T+ PLLQ V P +GC F++Y AA+AI+
Sbjct: 330 GNIAHFTQQTDLIPLLQNFGFIVDFKFHPEKGC----------AFVNYDSHERAALAIVQ 379
Query: 114 LNGRHLFGQPIKVNWA 129
L G + G+P+K W
Sbjct: 380 LAGFTINGRPLKCGWG 395
>gi|341900388|gb|EGT56323.1| CBN-TIAR-1 protein [Caenorhabditis brenneri]
Length = 399
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 105/287 (36%), Positives = 162/287 (56%), Gaps = 27/287 (9%)
Query: 57 RSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS-YGFIHYFDRRSAAMAILSLN 115
R++YVGN+ V+E + +F+ G V K+I + Y F+ + D A+ A+ ++N
Sbjct: 42 RTLYVGNLDPTVSEDFVATLFNQIGSVTKTKVIFDGANDPYAFVEFSDHAQASQALQTMN 101
Query: 116 GRHLFGQPIKVNWAYASGQ---REDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDAR 172
R L + +KVNWA GQ + DT+ HF++FVGDLS EV + L F + SDA+
Sbjct: 102 KRLLLDREMKVNWAVEPGQQPSKIDTTRHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAK 161
Query: 173 VMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSSD 232
V+ D T +S+G+GFVS+ +++A+ AI + G+WLG R IR NWAT+ G+ E +
Sbjct: 162 VIRDTNTTKSKGYGFVSYPKREEAERAIEQMNGQWLGRRTIRTNWATRKPGDQEKPVHYN 221
Query: 233 AKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIE 292
KS E+ N +S D T+VYVGN+A +++ D+ + F S G I
Sbjct: 222 EKSYDEIYNQTSGDN---------------TSVYVGNIA-NLSEEDIRQAFASYGR--IS 263
Query: 293 EVRVQRDKGFGFVRYSTHAEAALAI-QMGNTTQSSYLFGKQMKCSWG 338
EVR+ + +G+ FV++ AA AI QM N + G+ ++CSWG
Sbjct: 264 EVRIFKMQGYAFVKFDNKDAAAKAIVQMNNQE----VGGQLVRCSWG 306
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 105/234 (44%), Gaps = 37/234 (15%)
Query: 9 QQQQQQQALMQQALLQQQSLYHPGLLAAPQIEPIPSGNLPPGFDPSTCRSVYVGNIHTQV 68
Q Q Q + ++ LL ++ + +EP G P D + V+VG++ ++V
Sbjct: 92 QASQALQTMNKRLLLDRE------MKVNWAVEP---GQQPSKIDTTRHFHVFVGDLSSEV 142
Query: 69 TEPLLQEVFSSTGPVEGCKLIRKDKSS----YGFIHYFDRRSAAMAILSLNGRHLFGQPI 124
L+E F G V K+IR ++ YGF+ Y R A AI +NG+ L + I
Sbjct: 143 DNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQMNGQWLGRRTI 202
Query: 125 KVNWAYASGQREDTSGHFN-----------------IFVGDLSPEVTDATLFACFSVYPS 167
+ NWA ++ H+N ++VG+++ +++ + F+ Y
Sbjct: 203 RTNWATRKPGDQEKPVHYNEKSYDEIYNQTSGDNTSVYVGNIA-NLSEEDIRQAFASYGR 261
Query: 168 CSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKG 221
S+ R+ + +G+ FV F N+ A AI + + +G + +RC+W G
Sbjct: 262 ISEVRIF------KMQGYAFVKFDNKDAAAKAIVQMNNQEVGGQLVRCSWGKTG 309
Score = 45.1 bits (105), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 45/81 (55%), Gaps = 8/81 (9%)
Query: 264 TVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDKG---FGFVRYSTHAEAALAIQMG 320
T+YVGNL P V++ + F+ +G+ + + +V D + FV +S HA+A+ A+Q
Sbjct: 43 TLYVGNLDPTVSEDFVATLFNQIGS--VTKTKVIFDGANDPYAFVEFSDHAQASQALQ-- 98
Query: 321 NTTQSSYLFGKQMKCSWGSKP 341
T L ++MK +W +P
Sbjct: 99 -TMNKRLLLDREMKVNWAVEP 118
>gi|268531322|ref|XP_002630787.1| Hypothetical protein CBG02484 [Caenorhabditis briggsae]
Length = 403
Score = 179 bits (453), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 104/287 (36%), Positives = 163/287 (56%), Gaps = 27/287 (9%)
Query: 57 RSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS-YGFIHYFDRRSAAMAILSLN 115
R++YVGN+ V+E + +F+ G V K+I + Y F+ + D A+ A+ ++N
Sbjct: 42 RTLYVGNLDPSVSEDFIATLFNQIGSVTKTKVIHDGANDPYAFVEFSDHGQASQALQTMN 101
Query: 116 GRHLFGQPIKVNWAYASGQ---REDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDAR 172
R L + +KVNWA GQ + DT+ HF++FVGDLS EV + L F + SDA+
Sbjct: 102 KRLLHDREMKVNWAVEPGQQPSKIDTTRHFHVFVGDLSSEVDNQKLREAFIPFGDVSDAK 161
Query: 173 VMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSSD 232
V+ D T +S+G+GFVS+ +++A+ AI + G+WLG R IR NWAT+ G+ E + +
Sbjct: 162 VIRDTNTTKSKGYGFVSYPKREEAERAIEQMNGQWLGRRTIRTNWATRKPGDQEKPSNYN 221
Query: 233 AKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIE 292
KS E+ N +S D T+VYVGN+A +T+ ++ + F S G I
Sbjct: 222 EKSYDEVYNQTSGDN---------------TSVYVGNIA-NLTEDEIRQAFASYGR--IS 263
Query: 293 EVRVQRDKGFGFVRYSTHAEAALAI-QMGNTTQSSYLFGKQMKCSWG 338
EVR+ + +G+ FV++ AA AI +M N + G+ ++CSWG
Sbjct: 264 EVRIFKMQGYAFVKFENKNAAAKAITEMNNQD----VGGQMVRCSWG 306
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 95/204 (46%), Gaps = 31/204 (15%)
Query: 39 IEPIPSGNLPPGFDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--- 95
+EP G P D + V+VG++ ++V L+E F G V K+IR ++
Sbjct: 116 VEP---GQQPSKIDTTRHFHVFVGDLSSEVDNQKLREAFIPFGDVSDAKVIRDTNTTKSK 172
Query: 96 -YGFIHYFDRRSAAMAILSLNGRHLFGQPIKVNWAYASGQREDTSGHFN----------- 143
YGF+ Y R A AI +NG+ L + I+ NWA ++ ++N
Sbjct: 173 GYGFVSYPKREEAERAIEQMNGQWLGRRTIRTNWATRKPGDQEKPSNYNEKSYDEVYNQT 232
Query: 144 ------IFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQ 197
++VG+++ +T+ + F+ Y S+ R+ + +G+ FV F N+ A
Sbjct: 233 SGDNTSVYVGNIA-NLTEDEIRQAFASYGRISEVRIF------KMQGYAFVKFENKNAAA 285
Query: 198 SAINDLTGKWLGSRQIRCNWATKG 221
AI ++ + +G + +RC+W G
Sbjct: 286 KAITEMNNQDVGGQMVRCSWGKTG 309
>gi|262401121|gb|ACY66463.1| TIA-1-like protein [Scylla paramamosain]
Length = 325
Score = 178 bits (451), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 99/297 (33%), Positives = 163/297 (54%), Gaps = 25/297 (8%)
Query: 60 YVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS-YGFIHYFDRRSAAMAILSLNGRH 118
YVGN+ VTE L+ +F G V CK+ R+ + Y F+ + D +A AI +N +
Sbjct: 1 YVGNLDNSVTEDLIMMLFGQLGEVRSCKMFREPTTDPYCFVEFCDHMTALNAITMMNDKM 60
Query: 119 LFGQPIKVNWAYASGQRE-----DTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARV 173
L + ++V+WA G + DTS H +++VGDLSPE+ + L F V+ SD +V
Sbjct: 61 LQNRKMRVDWATGQGNKNKYTKVDTSRHHHVYVGDLSPEIDEQALREAFQVFGEISDCKV 120
Query: 174 MWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSSDA 233
+ D ++ +SRG+GFV F + DA+++I+ + G+WLG + I+ WAT+ N ++ +
Sbjct: 121 VKDPQSFKSRGYGFVVFVKKMDAETSISAMNGQWLGRKMIKTRWATRKPANTPNETKPEQ 180
Query: 234 KSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEE 293
K + + E N P N TTV+ G L ++T+ LH+ F G IE+
Sbjct: 181 KKL---------NYDEVFNQTTPTN----TTVFCGGLKQDITEEMLHKSFQPHGQ--IEK 225
Query: 294 VRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSKPTPPGTSSNP 350
+++ ++KG+ F++Y++ A AI +S L G+ ++CSWG K T +SNP
Sbjct: 226 IKIFKEKGYAFIKYTSKESACQAIV---ELHNSNLNGQMIRCSWG-KDTGVDQTSNP 278
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 83/190 (43%), Gaps = 29/190 (15%)
Query: 52 DPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKS----SYGFIHYFDRRSA 107
D S VYVG++ ++ E L+E F G + CK+++ +S YGF+ + + A
Sbjct: 84 DTSRHHHVYVGDLSPEIDEQALREAFQVFGEISDCKVVKDPQSFKSRGYGFVVFVKKMDA 143
Query: 108 AMAILSLNGRHLFGQPIKVNWA-------------------YASGQREDTSGHFNIFVGD 148
+I ++NG+ L + IK WA Y + T + +F G
Sbjct: 144 ETSISAMNGQWLGRKMIKTRWATRKPANTPNETKPEQKKLNYDEVFNQTTPTNTTVFCGG 203
Query: 149 LSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWL 208
L ++T+ L F + ++ + +G+ F+ + +++ A AI +L L
Sbjct: 204 LKQDITEEMLHKSFQPHGQIEKIKIF------KEKGYAFIKYTSKESACQAIVELHNSNL 257
Query: 209 GSRQIRCNWA 218
+ IRC+W
Sbjct: 258 NGQMIRCSWG 267
>gi|253683353|dbj|BAH84828.1| TIA-1-related RNA binding protein [Spodoptera frugiperda]
Length = 283
Score = 177 bits (450), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 108/292 (36%), Positives = 166/292 (56%), Gaps = 17/292 (5%)
Query: 52 DPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRK-DKSSYGFIHYFDRRSAAMA 110
D S +++YVGN+ VTE + +F G V+GCK+IR+ Y F+ + +AA A
Sbjct: 3 DESHPKTLYVGNLDASVTEVFICTLFGQIGEVKGCKIIREPGNDPYAFLEFTSHTAAATA 62
Query: 111 ILSLNGRHLFGQPIKVNWAYASGQ--REDTSGHFNIFVGDLSPEVTDATLFACFSVYPSC 168
+ ++N R + + +KVNWA + G + DTS H +IFVGDLSPE+ L F+ +
Sbjct: 63 LAAMNKRVVLDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETHILRDAFAPFGEI 122
Query: 169 SDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDK 228
S+ R++ D +T +S+G+ FVSF + DA++AI + G+WLGSR IR NW+T+ + ++
Sbjct: 123 SNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAMNGQWLGSRSIRTNWSTRKPPSKPNE 182
Query: 229 QSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGA 288
+ +K + T E N +P N TTVY G V DL ++ S
Sbjct: 183 GAPSSKRAKQPT------FDEVYNQSSPTN----TTVYCGGFTSNVITEDLMQNTFSQ-F 231
Query: 289 GVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSK 340
G I++VRV RDKG+ F+R++T AA AI+ + T+ S G +KC WG +
Sbjct: 232 GQIQDVRVFRDKGYAFIRFTTKEAAAHAIEATHNTEIS---GHIVKCFWGKE 280
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/202 (19%), Positives = 83/202 (41%), Gaps = 33/202 (16%)
Query: 49 PGFDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKS----SYGFIHYFDR 104
P D S ++VG++ ++ +L++ F+ G + C+++R ++ Y F+ + +
Sbjct: 88 PKTDTSNHHHIFVGDLSPEIETHILRDAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKK 147
Query: 105 RSAAMAILSLNGRHLFGQPIKVNWA----------------------YASGQREDTSGHF 142
A AI ++NG+ L + I+ NW+ + + + +
Sbjct: 148 ADAEAAIQAMNGQWLGSRSIRTNWSTRKPPSKPNEGAPSSKRAKQPTFDEVYNQSSPTNT 207
Query: 143 NIFVGDLSPEV-TDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAIN 201
++ G + V T+ + FS + D RV R +G+ F+ F ++ A AI
Sbjct: 208 TVYCGGFTSNVITEDLMQNTFSQFGQIQDVRVF------RDKGYAFIRFTTKEAAAHAIE 261
Query: 202 DLTGKWLGSRQIRCNWATKGAG 223
+ ++C W + G
Sbjct: 262 ATHNTEISGHIVKCFWGKENGG 283
>gi|10801574|dbj|BAB16700.1| TIA-1 like protein [Bombyx mori]
Length = 285
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 107/292 (36%), Positives = 165/292 (56%), Gaps = 16/292 (5%)
Query: 52 DPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRK-DKSSYGFIHYFDRRSAAMA 110
D S +++YVGN+ VTE L +F G V+GCK+IR+ Y F+ + +AA A
Sbjct: 3 DESHPKTLYVGNLDPSVTEVFLCTLFGXIGDVKGCKIIREPGNDPYAFLEFTCHTAAATA 62
Query: 111 ILSLNGRHLFGQPIKVNWAYASGQ--REDTSGHFNIFVGDLSPEVTDATLFACFSVYPSC 168
+ ++N R + + +KVNWA + G + DTS H +IFVGDLSPE+ L F+ +
Sbjct: 63 LAAMNKRVVLDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEI 122
Query: 169 SDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDK 228
S+ R++ D +T +S+G+ FVSF + DA++AI + G+WLGSR IR NW+T+
Sbjct: 123 SNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAMNGQWLGSRSIRTNWSTR-------- 174
Query: 229 QSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGA 288
AK V E S + T + +++P TTVY G + +L ++ S
Sbjct: 175 -KPPAKGVNEGAPSSKRAKQPTFDEVYNQSSPTNTTVYCGGFTSNIITEELMQNTFS-QF 232
Query: 289 GVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSK 340
G I+++RV RDKG+ F+R++T AA AI+ + T+ S G +KC WG +
Sbjct: 233 GQIQDIRVFRDKGYAFIRFTTKEAAAHAIEATHNTEIS---GHTVKCFWGER 281
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/200 (20%), Positives = 83/200 (41%), Gaps = 34/200 (17%)
Query: 49 PGFDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKS----SYGFIHYFDR 104
P D S ++VG++ ++ +L+E F+ G + C+++R ++ Y F+ + +
Sbjct: 88 PKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKK 147
Query: 105 RSAAMAILSLNGRHLFGQPIKVNWAY----ASGQRE-------------------DTSGH 141
A AI ++NG+ L + I+ NW+ A G E + +
Sbjct: 148 ADAEAAIQAMNGQWLGSRSIRTNWSTRKPPAKGVNEGAPSSKRAKQPTFDEVYNQSSPTN 207
Query: 142 FNIFVGDLSPE-VTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAI 200
++ G + +T+ + FS + D RV R +G+ F+ F ++ A AI
Sbjct: 208 TTVYCGGFTSNIITEELMQNTFSQFGQIQDIRVF------RDKGYAFIRFTTKEAAAHAI 261
Query: 201 NDLTGKWLGSRQIRCNWATK 220
+ ++C W +
Sbjct: 262 EATHNTEISGHTVKCFWGER 281
>gi|384498314|gb|EIE88805.1| hypothetical protein RO3G_13516 [Rhizopus delemar RA 99-880]
Length = 199
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 90/211 (42%), Positives = 130/211 (61%), Gaps = 22/211 (10%)
Query: 72 LLQEVFSSTGPVEGCKLIRKDKSSYGFIHYFDRRSAAMAILSLNGRHLFGQPIKVNWAYA 131
+L E+F++ GPV G K+I +YGF+ +FD R A AI +NGR +F I+ NWA
Sbjct: 1 MLHEIFATVGPVAGVKII-TGAVNYGFVEFFDPRVAEQAIQDMNGRKIFNYEIRANWAQP 59
Query: 132 SGQ-----REDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFG 186
S +EDT+ HF+IFVGDL+PE+T+ TL FSV+ + S+A VMWD +G+SRGFG
Sbjct: 60 SSSVQQTIKEDTTHHFHIFVGDLAPEITNETLAQAFSVFGTMSEAHVMWDPMSGKSRGFG 119
Query: 187 FVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSED 246
FV+FR++ DA+ AI + G+WLGSR +RCNWAT ++ A V +
Sbjct: 120 FVAFRDKADAEKAIATMNGEWLGSRPVRCNWAT--------QKGQTAMPV-------PQP 164
Query: 247 GKETTNTEAPENNPQY-TTVYVGNLAPEVTQ 276
G++ + P Y T++YVGN+ P V++
Sbjct: 165 GQQLPYEIVVQQTPAYVTSIYVGNIPPHVSR 195
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 82/174 (47%), Gaps = 37/174 (21%)
Query: 185 FGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSS 244
+GFV F + + A+ AI D+ G+ + + +IR NWA + SS + ++
Sbjct: 24 YGFVEFFDPRVAEQAIQDMNGRKIFNYEIRANWA---------QPSSSVQQTIK------ 68
Query: 245 EDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLG----AGVIEEVRVQRDK 300
E+ + ++VG+LAPE+T L + F G A V+ + + +
Sbjct: 69 ------------EDTTHHFHIFVGDLAPEITNETLAQAFSVFGTMSEAHVMWDPMSGKSR 116
Query: 301 GFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSKPTPPGTSSNPLPPP 354
GFGFV + A+A AI T +L + ++C+W ++ G ++ P+P P
Sbjct: 117 GFGFVAFRDKADAEKAIA---TMNGEWLGSRPVRCNWATQ---KGQTAMPVPQP 164
>gi|345324102|ref|XP_001514793.2| PREDICTED: nucleolysin TIAR-like [Ornithorhynchus anatinus]
Length = 452
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 100/246 (40%), Positives = 147/246 (59%), Gaps = 19/246 (7%)
Query: 96 YGFIHYFDRRSAAMAILSLNGRHLFGQPIKVNWAYA-SGQREDTSGHFNIFVGDLSPEVT 154
Y F+ +++ R AA A+ ++NGR + G+ +KVNWA S Q++DTS HF++FVGDLSPE+T
Sbjct: 130 YCFVEFYEHRDAAAALAAMNGRKILGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEIT 189
Query: 155 DATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIR 214
+ + F+ + SDARV+ D TG+S+G+GFVSF N+ DA++AI + G+WLG RQIR
Sbjct: 190 TEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIR 249
Query: 215 CNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEV 274
NWAT+ + Q + K + ++ N +P+N TVY G +A +
Sbjct: 250 TNWATRKPPAPKSTQENSTKQL---------RFEDVVNQSSPKN----CTVYCGGIASGL 296
Query: 275 TQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMK 334
T + + F G I E+RV +KG+ FVR+STH AA AI N T + G +K
Sbjct: 297 TDQLMRQTFSPFGQ--IMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTT---IEGHVVK 351
Query: 335 CSWGSK 340
C WG +
Sbjct: 352 CYWGKE 357
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/204 (19%), Positives = 85/204 (41%), Gaps = 29/204 (14%)
Query: 52 DPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRK----DKSSYGFIHYFDRRSA 107
D S V+VG++ ++T ++ F+ G + ++++ YGF+ ++++ A
Sbjct: 172 DTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDA 231
Query: 108 AMAILSLNGRHLFGQPIKVNWA-------------------YASGQREDTSGHFNIFVGD 148
AI+ + G+ L G+ I+ NWA + + + + ++ G
Sbjct: 232 ENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQENSTKQLRFEDVVNQSSPKNCTVYCGG 291
Query: 149 LSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWL 208
++ +TD + FS + + RV +G+ FV F + A AI + G +
Sbjct: 292 IASGLTDQLMRQTFSPFGQIMEIRVF------PEKGYSFVRFSTHESAAHAIVSVNGTTI 345
Query: 209 GSRQIRCNWATKGAGNNEDKQSSD 232
++C W + ++ Q D
Sbjct: 346 EGHVVKCYWGKESPDMTKNFQQVD 369
>gi|119569771|gb|EAW49386.1| TIA1 cytotoxic granule-associated RNA binding protein-like 1,
isoform CRA_b [Homo sapiens]
Length = 282
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 103/254 (40%), Positives = 152/254 (59%), Gaps = 20/254 (7%)
Query: 96 YGFIHYFDRRSAAMAILSLNGRHLFGQPIKVNWAYA-SGQREDTSGHFNIFVGDLSPEVT 154
Y F+ +++ R AA A+ ++NGR + G+ +KVNWA S Q++DTS HF++FVGDLSPE+T
Sbjct: 28 YCFVEFYEHRDAAAALAAMNGRKILGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEIT 87
Query: 155 DATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIR 214
+ + F+ + SDARV+ D TG+S+G+GFVSF N+ DA++AI + G+WLG RQIR
Sbjct: 88 TEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIR 147
Query: 215 CNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEV 274
NWAT+ + Q ++ K + ++ N +P+N TVY G +A +
Sbjct: 148 TNWATRKPPAPKSTQENNTKQL---------RFEDVVNQSSPKN----CTVYCGGIASGL 194
Query: 275 TQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMK 334
T + + F G I E+RV +KG+ FVR+STH AA AI N T + G +K
Sbjct: 195 TDQLMRQTFSPFGQ--IMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTT---IEGHVVK 249
Query: 335 CSWGSKPTPPGTSS 348
C WG K +P T +
Sbjct: 250 CYWG-KESPDMTKN 262
Score = 44.7 bits (104), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 42/80 (52%), Gaps = 3/80 (3%)
Query: 53 PSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSSYGFIHYFDRRSAAMAIL 112
P C +VY G I + +T+ L+++ FS G + ++ + Y F+ + SAA AI+
Sbjct: 180 PKNC-TVYCGGIASGLTDQLMRQTFSPFGQIMEIRVF--PEKGYSFVRFSTHESAAHAIV 236
Query: 113 SLNGRHLFGQPIKVNWAYAS 132
S+NG + G +K W S
Sbjct: 237 SVNGTTIEGHVVKCYWGKES 256
>gi|2281006|dbj|BAA21559.1| T-cluster binding protein [Homo sapiens]
gi|119569770|gb|EAW49385.1| TIA1 cytotoxic granule-associated RNA binding protein-like 1,
isoform CRA_a [Homo sapiens]
Length = 265
Score = 176 bits (445), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 103/254 (40%), Positives = 152/254 (59%), Gaps = 20/254 (7%)
Query: 96 YGFIHYFDRRSAAMAILSLNGRHLFGQPIKVNWAYA-SGQREDTSGHFNIFVGDLSPEVT 154
Y F+ +++ R AA A+ ++NGR + G+ +KVNWA S Q++DTS HF++FVGDLSPE+T
Sbjct: 11 YCFVEFYEHRDAAAALAAMNGRKILGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEIT 70
Query: 155 DATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIR 214
+ + F+ + SDARV+ D TG+S+G+GFVSF N+ DA++AI + G+WLG RQIR
Sbjct: 71 TEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIR 130
Query: 215 CNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEV 274
NWAT+ + Q ++ K + ++ N +P+N TVY G +A +
Sbjct: 131 TNWATRKPPAPKSTQENNTKQL---------RFEDVVNQSSPKN----CTVYCGGIASGL 177
Query: 275 TQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMK 334
T + + F G I E+RV +KG+ FVR+STH AA AI N T + G +K
Sbjct: 178 TDQLMRQTFSPFGQ--IMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTT---IEGHVVK 232
Query: 335 CSWGSKPTPPGTSS 348
C WG K +P T +
Sbjct: 233 CYWG-KESPDMTKN 245
Score = 44.7 bits (104), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 42/80 (52%), Gaps = 3/80 (3%)
Query: 53 PSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSSYGFIHYFDRRSAAMAIL 112
P C +VY G I + +T+ L+++ FS G + ++ + Y F+ + SAA AI+
Sbjct: 163 PKNC-TVYCGGIASGLTDQLMRQTFSPFGQIMEIRVF--PEKGYSFVRFSTHESAAHAIV 219
Query: 113 SLNGRHLFGQPIKVNWAYAS 132
S+NG + G +K W S
Sbjct: 220 SVNGTTIEGHVVKCYWGKES 239
>gi|344255843|gb|EGW11947.1| Nucleolysin TIAR [Cricetulus griseus]
Length = 353
Score = 176 bits (445), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 100/246 (40%), Positives = 148/246 (60%), Gaps = 19/246 (7%)
Query: 96 YGFIHYFDRRSAAMAILSLNGRHLFGQPIKVNWAYA-SGQREDTSGHFNIFVGDLSPEVT 154
Y F+ +++ R AA A+ ++NGR + G+ +KVNWA S Q++DTS HF++FVGDLSPE+T
Sbjct: 28 YCFVEFYEHRDAAAALAAMNGRKILGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEIT 87
Query: 155 DATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIR 214
+ + F+ + SDARV+ D TG+S+G+GFVSF N+ DA++AI + G+WLG RQIR
Sbjct: 88 TEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIR 147
Query: 215 CNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEV 274
NWAT+ + Q ++ K + ++ N +P+N TVY G +A +
Sbjct: 148 TNWATRKPPAPKSTQETNTKQL---------RFEDVVNQSSPKN----CTVYCGGIASGL 194
Query: 275 TQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMK 334
T + + F G I E+RV +KG+ FVR+STH AA AI N T + G +K
Sbjct: 195 TDQLMRQTFSPFGQ--IMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTT---IEGHVVK 249
Query: 335 CSWGSK 340
C WG +
Sbjct: 250 CYWGKE 255
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/204 (21%), Positives = 86/204 (42%), Gaps = 29/204 (14%)
Query: 52 DPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRK----DKSSYGFIHYFDRRSA 107
D S V+VG++ ++T ++ F+ G + ++++ YGF+ ++++ A
Sbjct: 70 DTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDA 129
Query: 108 AMAILSLNGRHLFGQPIKVNWAY------ASGQREDTS-------------GHFNIFVGD 148
AI+ + G+ L G+ I+ NWA S Q +T + ++ G
Sbjct: 130 ENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQETNTKQLRFEDVVNQSSPKNCTVYCGG 189
Query: 149 LSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWL 208
++ +TD + FS + + RV +G+ FV F + A AI + G +
Sbjct: 190 IASGLTDQLMRQTFSPFGQIMEIRVF------PEKGYSFVRFSTHESAAHAIVSVNGTTI 243
Query: 209 GSRQIRCNWATKGAGNNEDKQSSD 232
++C W + ++ Q D
Sbjct: 244 EGHVVKCYWGKESPDMTKNFQQVD 267
>gi|335775520|gb|AEH58599.1| nucleolysin TIAR-like protein, partial [Equus caballus]
Length = 242
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 103/254 (40%), Positives = 152/254 (59%), Gaps = 20/254 (7%)
Query: 96 YGFIHYFDRRSAAMAILSLNGRHLFGQPIKVNWAYA-SGQREDTSGHFNIFVGDLSPEVT 154
Y F+ +++ R AA A+ ++NGR + G+ +KVNWA S Q++DTS HF++FVGDLSPE+T
Sbjct: 6 YCFVEFYEHRDAAAALAAMNGRKILGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEIT 65
Query: 155 DATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIR 214
+ + F+ + SDARV+ D TG+S+G+GFVSF N+ DA++AI + G+WLG RQIR
Sbjct: 66 TEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIR 125
Query: 215 CNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEV 274
NWAT+ + Q ++ K + ++ N +P+N TVY G +A +
Sbjct: 126 TNWATRKPPAPKSTQENNTKQL---------RFEDVVNQSSPKN----CTVYCGGIASGL 172
Query: 275 TQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMK 334
T + + F G I E+RV +KG+ FVR+STH AA AI N T + G +K
Sbjct: 173 TDQLMRQTFSPFGQ--IMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTT---IEGHVVK 227
Query: 335 CSWGSKPTPPGTSS 348
C WG K +P T +
Sbjct: 228 CYWG-KESPDMTKN 240
Score = 45.4 bits (106), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 42/80 (52%), Gaps = 3/80 (3%)
Query: 53 PSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSSYGFIHYFDRRSAAMAIL 112
P C +VY G I + +T+ L+++ FS G + ++ + Y F+ + SAA AI+
Sbjct: 158 PKNC-TVYCGGIASGLTDQLMRQTFSPFGQIMEIRVF--PEKGYSFVRFSTHESAAHAIV 214
Query: 113 SLNGRHLFGQPIKVNWAYAS 132
S+NG + G +K W S
Sbjct: 215 SVNGTTIEGHVVKCYWGKES 234
>gi|354500962|ref|XP_003512565.1| PREDICTED: nucleolysin TIAR [Cricetulus griseus]
Length = 336
Score = 175 bits (444), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 100/246 (40%), Positives = 148/246 (60%), Gaps = 19/246 (7%)
Query: 96 YGFIHYFDRRSAAMAILSLNGRHLFGQPIKVNWAYA-SGQREDTSGHFNIFVGDLSPEVT 154
Y F+ +++ R AA A+ ++NGR + G+ +KVNWA S Q++DTS HF++FVGDLSPE+T
Sbjct: 11 YCFVEFYEHRDAAAALAAMNGRKILGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEIT 70
Query: 155 DATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIR 214
+ + F+ + SDARV+ D TG+S+G+GFVSF N+ DA++AI + G+WLG RQIR
Sbjct: 71 TEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIR 130
Query: 215 CNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEV 274
NWAT+ + Q ++ K + ++ N +P+N TVY G +A +
Sbjct: 131 TNWATRKPPAPKSTQETNTKQL---------RFEDVVNQSSPKN----CTVYCGGIASGL 177
Query: 275 TQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMK 334
T + + F G I E+RV +KG+ FVR+STH AA AI N T + G +K
Sbjct: 178 TDQLMRQTFSPFGQ--IMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTT---IEGHVVK 232
Query: 335 CSWGSK 340
C WG +
Sbjct: 233 CYWGKE 238
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/204 (21%), Positives = 86/204 (42%), Gaps = 29/204 (14%)
Query: 52 DPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRK----DKSSYGFIHYFDRRSA 107
D S V+VG++ ++T ++ F+ G + ++++ YGF+ ++++ A
Sbjct: 53 DTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDA 112
Query: 108 AMAILSLNGRHLFGQPIKVNWAY------ASGQREDTS-------------GHFNIFVGD 148
AI+ + G+ L G+ I+ NWA S Q +T + ++ G
Sbjct: 113 ENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQETNTKQLRFEDVVNQSSPKNCTVYCGG 172
Query: 149 LSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWL 208
++ +TD + FS + + RV +G+ FV F + A AI + G +
Sbjct: 173 IASGLTDQLMRQTFSPFGQIMEIRVF------PEKGYSFVRFSTHESAAHAIVSVNGTTI 226
Query: 209 GSRQIRCNWATKGAGNNEDKQSSD 232
++C W + ++ Q D
Sbjct: 227 EGHVVKCYWGKESPDMTKNFQQVD 250
>gi|441599875|ref|XP_004087575.1| PREDICTED: nucleolysin TIAR isoform 2 [Nomascus leucogenys]
gi|441599878|ref|XP_003255076.2| PREDICTED: nucleolysin TIAR isoform 1 [Nomascus leucogenys]
gi|119569773|gb|EAW49388.1| TIA1 cytotoxic granule-associated RNA binding protein-like 1,
isoform CRA_d [Homo sapiens]
Length = 353
Score = 175 bits (444), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 100/246 (40%), Positives = 148/246 (60%), Gaps = 19/246 (7%)
Query: 96 YGFIHYFDRRSAAMAILSLNGRHLFGQPIKVNWAYA-SGQREDTSGHFNIFVGDLSPEVT 154
Y F+ +++ R AA A+ ++NGR + G+ +KVNWA S Q++DTS HF++FVGDLSPE+T
Sbjct: 28 YCFVEFYEHRDAAAALAAMNGRKILGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEIT 87
Query: 155 DATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIR 214
+ + F+ + SDARV+ D TG+S+G+GFVSF N+ DA++AI + G+WLG RQIR
Sbjct: 88 TEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIR 147
Query: 215 CNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEV 274
NWAT+ + Q ++ K + ++ N +P+N TVY G +A +
Sbjct: 148 TNWATRKPPAPKSTQENNTKQL---------RFEDVVNQSSPKN----CTVYCGGIASGL 194
Query: 275 TQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMK 334
T + + F G I E+RV +KG+ FVR+STH AA AI N T + G +K
Sbjct: 195 TDQLMRQTFSPFGQ--IMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTT---IEGHVVK 249
Query: 335 CSWGSK 340
C WG +
Sbjct: 250 CYWGKE 255
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/204 (21%), Positives = 86/204 (42%), Gaps = 29/204 (14%)
Query: 52 DPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRK----DKSSYGFIHYFDRRSA 107
D S V+VG++ ++T ++ F+ G + ++++ YGF+ ++++ A
Sbjct: 70 DTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDA 129
Query: 108 AMAILSLNGRHLFGQPIKVNWAY------ASGQREDTS-------------GHFNIFVGD 148
AI+ + G+ L G+ I+ NWA S Q +T + ++ G
Sbjct: 130 ENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYCGG 189
Query: 149 LSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWL 208
++ +TD + FS + + RV +G+ FV F + A AI + G +
Sbjct: 190 IASGLTDQLMRQTFSPFGQIMEIRVF------PEKGYSFVRFSTHESAAHAIVSVNGTTI 243
Query: 209 GSRQIRCNWATKGAGNNEDKQSSD 232
++C W + ++ Q D
Sbjct: 244 EGHVVKCYWGKESPDMTKNFQQVD 267
>gi|119569772|gb|EAW49387.1| TIA1 cytotoxic granule-associated RNA binding protein-like 1,
isoform CRA_c [Homo sapiens]
Length = 336
Score = 175 bits (443), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 100/246 (40%), Positives = 148/246 (60%), Gaps = 19/246 (7%)
Query: 96 YGFIHYFDRRSAAMAILSLNGRHLFGQPIKVNWAYA-SGQREDTSGHFNIFVGDLSPEVT 154
Y F+ +++ R AA A+ ++NGR + G+ +KVNWA S Q++DTS HF++FVGDLSPE+T
Sbjct: 11 YCFVEFYEHRDAAAALAAMNGRKILGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEIT 70
Query: 155 DATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIR 214
+ + F+ + SDARV+ D TG+S+G+GFVSF N+ DA++AI + G+WLG RQIR
Sbjct: 71 TEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIR 130
Query: 215 CNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEV 274
NWAT+ + Q ++ K + ++ N +P+N TVY G +A +
Sbjct: 131 TNWATRKPPAPKSTQENNTKQL---------RFEDVVNQSSPKN----CTVYCGGIASGL 177
Query: 275 TQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMK 334
T + + F G I E+RV +KG+ FVR+STH AA AI N T + G +K
Sbjct: 178 TDQLMRQTFSPFGQ--IMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTT---IEGHVVK 232
Query: 335 CSWGSK 340
C WG +
Sbjct: 233 CYWGKE 238
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/204 (21%), Positives = 86/204 (42%), Gaps = 29/204 (14%)
Query: 52 DPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRK----DKSSYGFIHYFDRRSA 107
D S V+VG++ ++T ++ F+ G + ++++ YGF+ ++++ A
Sbjct: 53 DTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDA 112
Query: 108 AMAILSLNGRHLFGQPIKVNWAY------ASGQREDTS-------------GHFNIFVGD 148
AI+ + G+ L G+ I+ NWA S Q +T + ++ G
Sbjct: 113 ENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYCGG 172
Query: 149 LSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWL 208
++ +TD + FS + + RV +G+ FV F + A AI + G +
Sbjct: 173 IASGLTDQLMRQTFSPFGQIMEIRVF------PEKGYSFVRFSTHESAAHAIVSVNGTTI 226
Query: 209 GSRQIRCNWATKGAGNNEDKQSSD 232
++C W + ++ Q D
Sbjct: 227 EGHVVKCYWGKESPDMTKNFQQVD 250
>gi|198430188|ref|XP_002121753.1| PREDICTED: similar to Nucleolysin TIAR (TIA-1-related protein)
[Ciona intestinalis]
Length = 476
Score = 174 bits (441), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 110/303 (36%), Positives = 157/303 (51%), Gaps = 29/303 (9%)
Query: 52 DPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRRSAAM 109
D + +++YVGN+ V+E L+ E+F GP + CK+I Y F+ +++ A
Sbjct: 21 DEAYPKTLYVGNLDPLVSESLIMELFCVIGPCKSCKMITDPAGGDPYCFVEFYEHSHALA 80
Query: 110 AILSLNGRHLFGQPIKVNWAYASGQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCS 169
A ++N R + G+ I+VNWA + DTS H +IFVGDL+PE T L FS S
Sbjct: 81 AHGAMNQRKILGKEIRVNWATRPSNKRDTSNHHHIFVGDLAPETTSDDLKTYFSRIGIVS 140
Query: 170 DARVMWDQKTGRSRGFGFVSFRNQQDAQSAIND--LTGKWLGSRQIRCNWATKGAGNNED 227
DARVM D +T +S+G+GFVSF N QDAQ + + L RQ+RCNWA + G
Sbjct: 141 DARVMRDLQTNKSKGYGFVSFVNYQDAQDIVEKKRIIPDALHGRQVRCNWAARKGGQTGG 200
Query: 228 K--QSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHS 285
+ Q + +VV +++NT TVY+G +T + F
Sbjct: 201 RTFQKLEFANVV----------NQSSNTNC--------TVYLGGCMSGLTDQLMRETF-- 240
Query: 286 LGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSKPTPPG 345
G G I E+RV DKG+ F+R+ H +AA AI S L G +KCSWG + T G
Sbjct: 241 AGFGNILEIRVFPDKGYSFIRFDNHTDAAQAIT---NKHGSTLEGYTVKCSWGKEGTSLG 297
Query: 346 TSS 348
S+
Sbjct: 298 NSN 300
>gi|258570067|ref|XP_002543837.1| OsGRP2 protein [Uncinocarpus reesii 1704]
gi|237904107|gb|EEP78508.1| OsGRP2 protein [Uncinocarpus reesii 1704]
Length = 370
Score = 174 bits (440), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 108/254 (42%), Positives = 141/254 (55%), Gaps = 24/254 (9%)
Query: 95 SYGFIHYFDRRSAAMAILSLNGRHLFGQPIKVNWAYASGQ--REDTSGHFNIFVGDLSPE 152
+YGF+ Y D +A A+ +LNGR + I+VNWAY S +EDTS HF+IFVGDLS E
Sbjct: 40 NYGFVEYDDPGAAERAMQTLNGRRVHQSEIRVNWAYQSNNNNKEDTSNHFHIFVGDLSNE 99
Query: 153 VTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQ 212
V D L FS + S S+ARVMWD KTGRSRG+GFV+FR + DA+ A++ + G+WLGSR
Sbjct: 100 VNDEVLLQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRERADAEKALSSMDGEWLGSRA 159
Query: 213 IRCNWAT-KGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLA 271
IRCNWA KG + +Q+ A + T G T ++ Y V
Sbjct: 160 IRCNWANQKGQPSISQQQAMAAMGMTPTT----PFGHHHFPTHGVQS---YDMVVQQTPQ 212
Query: 272 PEVTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGK 331
+ T L L SL + R Q D+GF FV+ TH AA+AI N + G+
Sbjct: 213 WQTTTLAL-----SL------KTRFQADRGFAFVKMDTHENAAMAICQLNGYN---VNGR 258
Query: 332 QMKCSWGSKPTPPG 345
+KCSWG P G
Sbjct: 259 PLKCSWGKDRPPTG 272
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/183 (22%), Positives = 78/183 (42%), Gaps = 17/183 (9%)
Query: 52 DPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKS----SYGFIHYFDRRSA 107
D S ++VG++ +V + +L + FS+ G V +++ K+ YGF+ + +R A
Sbjct: 84 DTSNHFHIFVGDLSNEVNDEVLLQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRERADA 143
Query: 108 AMAILSLNGRHLFGQPIKVNWAYASGQREDTSGHFNIFVGDLSPE------------VTD 155
A+ S++G L + I+ NWA GQ + +G ++P V
Sbjct: 144 EKALSSMDGEWLGSRAIRCNWANQKGQPSISQQQAMAAMG-MTPTTPFGHHHFPTHGVQS 202
Query: 156 ATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRC 215
+ + + + + RGF FV ++A AI L G + R ++C
Sbjct: 203 YDMVVQQTPQWQTTTLALSLKTRFQADRGFAFVKMDTHENAAMAICQLNGYNVNGRPLKC 262
Query: 216 NWA 218
+W
Sbjct: 263 SWG 265
>gi|50289655|ref|XP_447259.1| hypothetical protein [Candida glabrata CBS 138]
gi|49526568|emb|CAG60192.1| unnamed protein product [Candida glabrata]
Length = 416
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 115/367 (31%), Positives = 179/367 (48%), Gaps = 66/367 (17%)
Query: 54 STCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKS---SYGFIHYFDRRSAAMA 110
++ R +YVGN+ +TE LL++ F + GP++ K+I K+ +Y F+ Y A +A
Sbjct: 55 TSDRVLYVGNLDKSITEDLLKQYFQAGGPIQNVKIIEDMKNEYVNYAFVEYIRSHDANVA 114
Query: 111 ILSLNGRHLFGQPIKVNWAYASGQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSD 170
+ +LNG L + +K+NWA+ + Q + FN+FVGDL+ +V D TL F +P+
Sbjct: 115 LQTLNGVQLENKTLKINWAFETQQAAENDDTFNLFVGDLNVDVDDETLAGTFREFPTFIQ 174
Query: 171 ARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT---KGAGN--- 224
A VMWD +TGRSRG+GFVSF NQ++AQ A++ + GK L RQIR NWAT + GN
Sbjct: 175 AHVMWDMQTGRSRGYGFVSFSNQEEAQKAMDAMQGKDLSGRQIRINWATKRERNMGNNFG 234
Query: 225 --------------NEDKQSSDAKSVVELTNGSSEDG----------------------- 247
N+ + + ++++ G DG
Sbjct: 235 NNRGSRGGNFRPYGNQGHHNRNNRNMMPPAMGMPMDGLMPMQQGQQNGQQPNVQQQQPMV 294
Query: 248 KETTNTEAPENN-----PQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDKGF 302
N +A E+ P+ TT Y+GN+ T+ DL + G I + +KG
Sbjct: 295 PPPVNPQAIEDMIRRAPPRVTTAYIGNIPHYATEADLIPLLQNFG--FILDFTHYPEKGC 352
Query: 303 GFVRYSTHAEAALAIQMGNTTQSSYLF-GKQMKCSWGSKPT----PPGTSSNPLP----P 353
F++Y TH +AA+ I +++ F G+ ++ WG + T P G +P P
Sbjct: 353 CFIKYDTHEQAAVCI----VALANFPFQGRNLRTGWGKERTNFMPPQGAPGQQMPVMMDP 408
Query: 354 PAAAPIP 360
A P P
Sbjct: 409 SQAPPAP 415
Score = 39.3 bits (90), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 58/120 (48%), Gaps = 21/120 (17%)
Query: 223 GNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRH 282
G+N +++ D K V + +++ G+ET++ +YVGNL +T+ L ++
Sbjct: 29 GDNASQENDDDKPSV-VPASATKGGRETSDR----------VLYVGNLDKSITEDLLKQY 77
Query: 283 FHSLGAGVIEEVRVQRDK-----GFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSW 337
F + G I+ V++ D + FV Y +A +A+Q N Q L K +K +W
Sbjct: 78 FQA--GGPIQNVKIIEDMKNEYVNYAFVEYIRSHDANVALQTLNGVQ---LENKTLKINW 132
>gi|353237193|emb|CCA69172.1| related to PUB1-major polyadenylated RNA-binding protein of nucleus
and cytoplasm [Piriformospora indica DSM 11827]
Length = 415
Score = 171 bits (433), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 77/156 (49%), Positives = 110/156 (70%), Gaps = 8/156 (5%)
Query: 72 LLQEVFSSTGPVEGCKLIRKDKS------SYGFIHYFDRRSAAMAILSLNGRHLFGQPIK 125
+L E+F+ GPV+ K+I D++ +YGF+ Y D R+A A+ +LNGR +F I+
Sbjct: 1 MLTEIFAVAGPVQHVKII-PDRNYQHGGLNYGFVEYMDMRAAETALQTLNGRKIFDTEIR 59
Query: 126 VNWAY-ASGQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRG 184
VNWAY + +EDT+ H+++FVGDLSPEVTD L FS + + SDARVMWD +G+SRG
Sbjct: 60 VNWAYQGTTNKEDTTNHYHVFVGDLSPEVTDDVLSKAFSAFGTLSDARVMWDMNSGKSRG 119
Query: 185 FGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATK 220
+GF++FR++ DA+ AI + G+WLGSR IR NWA +
Sbjct: 120 YGFLAFRDKTDAEQAIATMNGEWLGSRAIRVNWANQ 155
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/92 (42%), Positives = 52/92 (56%), Gaps = 6/92 (6%)
Query: 260 PQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQM 319
P TTVYVGNL TQ DL F ++G + E+R+Q D+GF FV+ +H AA AI
Sbjct: 241 PHNTTVYVGNLPSYATQSDLIPLFQTIG--YVSEIRIQADRGFAFVKLESHEAAAAAIVQ 298
Query: 320 GNTTQSSYLFGKQMKCSWGSKPTPPGTSSNPL 351
Q + G+ +KCSWG K G +S P+
Sbjct: 299 ---LQGHLVQGRPIKCSWG-KDRAAGDTSTPV 326
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 75/162 (46%), Gaps = 38/162 (23%)
Query: 185 FGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSS 244
+GFV + + + A++A+ L G+ + +IR NWA +G N ED
Sbjct: 30 YGFVEYMDMRAAETALQTLNGRKIFDTEIRVNWAYQGTTNKED----------------- 72
Query: 245 EDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLG----AGVIEEVRVQRDK 300
TTN + V+VG+L+PEVT L + F + G A V+ ++ + +
Sbjct: 73 -----TTN---------HYHVFVGDLSPEVTDDVLSKAFSAFGTLSDARVMWDMNSGKSR 118
Query: 301 GFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSKPT 342
G+GF+ + +A AI T +L + ++ +W ++ T
Sbjct: 119 GYGFLAFRDKTDAEQAIA---TMNGEWLGSRAIRVNWANQKT 157
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 46/82 (56%), Gaps = 4/82 (4%)
Query: 52 DPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKS----SYGFIHYFDRRSA 107
D + V+VG++ +VT+ +L + FS+ G + +++ S YGF+ + D+ A
Sbjct: 72 DTTNHYHVFVGDLSPEVTDDVLSKAFSAFGTLSDARVMWDMNSGKSRGYGFLAFRDKTDA 131
Query: 108 AMAILSLNGRHLFGQPIKVNWA 129
AI ++NG L + I+VNWA
Sbjct: 132 EQAIATMNGEWLGSRAIRVNWA 153
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 42/94 (44%), Gaps = 13/94 (13%)
Query: 144 IFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDL 203
++VG+L T + L F S+ R+ D RGF FV + + A +AI L
Sbjct: 246 VYVGNLPSYATQSDLIPLFQTIGYVSEIRIQAD------RGFAFVKLESHEAAAAAIVQL 299
Query: 204 TGKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVV 237
G + R I+C+W +D+ + D + V
Sbjct: 300 QGHLVQGRPIKCSWG-------KDRAAGDTSTPV 326
Score = 43.1 bits (100), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 52/104 (50%), Gaps = 7/104 (6%)
Query: 53 PSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSSYGFIHYFDRRSAAMAIL 112
P +VYVGN+ + T+ L +F + G V + I+ D+ + F+ +AA AI+
Sbjct: 240 PPHNTTVYVGNLPSYATQSDLIPLFQTIGYVSEIR-IQADRG-FAFVKLESHEAAAAAIV 297
Query: 113 SLNGRHLFGQPIKVNWAYASGQREDTSGHFNIFVGDLSPEVTDA 156
L G + G+PIK +W ++ +G + V ++P T +
Sbjct: 298 QLQGHLVQGRPIKCSWG-----KDRAAGDTSTPVASMTPTGTSS 336
>gi|327267754|ref|XP_003218664.1| PREDICTED: nucleolysin TIAR-like [Anolis carolinensis]
Length = 342
Score = 171 bits (432), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 100/246 (40%), Positives = 144/246 (58%), Gaps = 19/246 (7%)
Query: 96 YGFIHYFDRRSAAMAILSLNGRHLFGQPIKVNWAYA-SGQREDTSGHFNIFVGDLSPEVT 154
Y F+ +++ R AA A+ ++NGR + G+ +KVNWA S Q++DTS HF++FVGDLSPE+T
Sbjct: 11 YCFVEFYEHRDAAAALAAMNGRKILGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEIT 70
Query: 155 DATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIR 214
+ + F+ + SDARV+ D TG+S+G+GFVSF N+ DA++AI + G+WLG RQIR
Sbjct: 71 TEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIR 130
Query: 215 CNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEV 274
NWAT+ + Q S K + ++ N +P+N TVY G +A +
Sbjct: 131 TNWATRKPPAPKTTQESTTKQL---------RFEDVVNQSSPKN----CTVYCGGIASGL 177
Query: 275 TQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMK 334
T + + F G I E R KG+ FVR+STH AA AI N T + G +K
Sbjct: 178 TDQLMRQTFSPFGQ--ILETRAFPGKGYSFVRFSTHESAAHAIVSVNGTT---IEGHVVK 232
Query: 335 CSWGSK 340
C WG +
Sbjct: 233 CYWGKE 238
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/204 (19%), Positives = 84/204 (41%), Gaps = 29/204 (14%)
Query: 52 DPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRK----DKSSYGFIHYFDRRSA 107
D S V+VG++ ++T ++ F+ G + ++++ YGF+ ++++ A
Sbjct: 53 DTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDA 112
Query: 108 AMAILSLNGRHLFGQPIKVNWA-------------------YASGQREDTSGHFNIFVGD 148
AI+ + G+ L G+ I+ NWA + + + + ++ G
Sbjct: 113 ENAIVHMGGQWLGGRQIRTNWATRKPPAPKTTQESTTKQLRFEDVVNQSSPKNCTVYCGG 172
Query: 149 LSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWL 208
++ +TD + FS + + R +G+ FV F + A AI + G +
Sbjct: 173 IASGLTDQLMRQTFSPFGQILETRAF------PGKGYSFVRFSTHESAAHAIVSVNGTTI 226
Query: 209 GSRQIRCNWATKGAGNNEDKQSSD 232
++C W + ++ Q D
Sbjct: 227 EGHVVKCYWGKESPDMTKNFQQVD 250
>gi|388851777|emb|CCF54583.1| related to PUB1-major polyadenylated RNA-binding protein of nucleus
and cytoplasm [Ustilago hordei]
Length = 403
Score = 171 bits (432), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 114/358 (31%), Positives = 163/358 (45%), Gaps = 80/358 (22%)
Query: 59 VYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS---YGFIHYFDRRSAAMAILSLN 115
V+V N+ TE L E+F S G ++ K++ YGF+ Y D SA AI +++
Sbjct: 8 VHVANLPATTTERDLCEMFGSLGQIQSAKVVTSRPVGGLVYGFVEYVDAASAERAIRTMD 67
Query: 116 GRHLFGQPIKVNWAYAS---------------------GQ--REDTSGHFNIFVGDLSPE 152
G FG PIKV WA S GQ +GH ++FVGDLSPE
Sbjct: 68 GWLWFGTPIKVTWAKHSMHPDAATSPAAMGEVDPAERGGQVAMHSNAGHSHLFVGDLSPE 127
Query: 153 VTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQ 212
V DA+L A FS PS +D RVM+D +TG+SRGFGF++FR++ DA++ I + G+WLG RQ
Sbjct: 128 VDDASLHALFSRVPSLADVRVMYDAETGKSRGFGFINFRSRNDAETCITTMQGQWLGGRQ 187
Query: 213 IRCNWATKGAGNN------------------EDKQSSDAKSVVELTNGSSEDGKETTNTE 254
IR NWA + N Q A +L S + T+
Sbjct: 188 IRVNWANQKNQNQPPLTAITTISGDYPTAYPSQSQQRPAPFSTKLVLSSYTSTPSNSITD 247
Query: 255 APE------------------NNPQYT-----------------TVYVGNLAPEVTQLDL 279
P NP T +VYVGNL+P ++ DL
Sbjct: 248 RPRFPGLPRRHTAGFDSSTQPTNPSLTHKTYSQVLSSAPSPDLTSVYVGNLSPLTSRQDL 307
Query: 280 HRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSW 337
R F G E R+ +G+GF++ ++H +AA AI + Q ++ + ++ W
Sbjct: 308 LRMFAPFNHGQPLEARIPSGRGYGFIKLTSHEQAASAI-CTLSIQGVFMHSRWLRFGW 364
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 88/204 (43%), Gaps = 23/204 (11%)
Query: 144 IFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDL 203
+ V +L T+ L F A+V+ + G +GFV + + A+ AI +
Sbjct: 8 VHVANLPATTTERDLCEMFGSLGQIQSAKVVTSRPVG-GLVYGFVEYVDAASAERAIRTM 66
Query: 204 TG-KWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQY 262
G W G+ I+ WA K S + D E A +N +
Sbjct: 67 DGWLWFGT-PIKVTWA---------KHSMHPDAATSPAAMGEVDPAERGGQVAMHSNAGH 116
Query: 263 TTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRD------KGFGFVRYSTHAEAALA 316
+ ++VG+L+PEV LH F + + + +VRV D +GFGF+ + + +A
Sbjct: 117 SHLFVGDLSPEVDDASLHALFSRVPS--LADVRVMYDAETGKSRGFGFINFRSRNDAETC 174
Query: 317 IQMGNTTQSSYLFGKQMKCSWGSK 340
I T Q +L G+Q++ +W ++
Sbjct: 175 I---TTMQGQWLGGRQIRVNWANQ 195
Score = 39.3 bits (90), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 39/89 (43%), Gaps = 6/89 (6%)
Query: 265 VYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDKG---FGFVRYSTHAEAALAIQMGN 321
V+V NL T+ DL F SLG +V R G +GFV Y A A AI+
Sbjct: 8 VHVANLPATTTERDLCEMFGSLGQIQSAKVVTSRPVGGLVYGFVEYVDAASAERAIR--- 64
Query: 322 TTQSSYLFGKQMKCSWGSKPTPPGTSSNP 350
T FG +K +W P +++P
Sbjct: 65 TMDGWLWFGTPIKVTWAKHSMHPDAATSP 93
>gi|426335862|ref|XP_004029425.1| PREDICTED: nucleolysin TIA-1 isoform p40 [Gorilla gorilla gorilla]
Length = 353
Score = 168 bits (426), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 107/296 (36%), Positives = 153/296 (51%), Gaps = 61/296 (20%)
Query: 57 RSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSSYGFIHYFDRRSAAMAILSLNG 116
+++YVGN+ VTE L+ ++FS GP + CK+I +
Sbjct: 7 KTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDE------------------------ 42
Query: 117 RHLFGQPIKVNWAYA-SGQREDTSG-----------HFNIFVGDLSPEVTDATLFACFSV 164
+KVNWA S Q++DTS HF++FVGDLSPE+T + A F+
Sbjct: 43 -------VKVNWATTPSSQKKDTSSSTVVSTQRSQDHFHVFVGDLSPEITTEDIKAAFAP 95
Query: 165 YPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGN 224
+ SDARV+ D TG+S+G+GFVSF N+ DA++AI + G+WLG RQIR NWAT+
Sbjct: 96 FGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPA 155
Query: 225 NEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFH 284
+ S+ K + S D E N +P N TVY G + +T+ + + F
Sbjct: 156 PKSTYESNTKQL-------SYD--EVVNQSSPSN----CTVYCGGVTSGLTEQLMRQTFS 202
Query: 285 SLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSK 340
G I E+RV DKG+ FVR+++H AA AI N T + G +KC WG +
Sbjct: 203 PFGQ--IMEIRVFPDKGYSFVRFNSHESAAHAIVSVNGTT---IEGHVVKCYWGKE 253
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 3/77 (3%)
Query: 53 PSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSSYGFIHYFDRRSAAMAIL 112
PS C +VY G + + +TE L+++ FS G + ++ DK Y F+ + SAA AI+
Sbjct: 178 PSNC-TVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVF-PDK-GYSFVRFNSHESAAHAIV 234
Query: 113 SLNGRHLFGQPIKVNWA 129
S+NG + G +K W
Sbjct: 235 SVNGTTIEGHVVKCYWG 251
>gi|341893520|gb|EGT49455.1| CBN-TIAR-2 protein [Caenorhabditis brenneri]
Length = 420
Score = 168 bits (425), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 99/296 (33%), Positives = 158/296 (53%), Gaps = 25/296 (8%)
Query: 57 RSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDK---SSYGFIHYFDRRSAAMAILS 113
R+++VGN+ VT+ + +F+ G V K+I + Y FI + D AA A+ S
Sbjct: 38 RTLFVGNLDPAVTDEFIATLFNQMGAVTKAKIIFDFQGLADPYAFIEFSDHNQAAQALQS 97
Query: 114 LNGRHLFGQPIKVNWAYA------SGQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPS 167
+NGR L + ++VNWA S ++ D S HF++FVGDLS E+ L F +
Sbjct: 98 MNGRQLLDRELRVNWAVEPNQPGDSSRKMDYSRHFHVFVGDLSSEIDSTKLKEAFLPFGE 157
Query: 168 CSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATK----GAG 223
S+A+++ D T +++G+GFVS+ ++DA+ AI + G+WLG R IR NWA++
Sbjct: 158 VSEAKIIRDTTTNKAKGYGFVSYPRREDAERAIEQMNGQWLGRRTIRTNWASRKPGEEGE 217
Query: 224 NNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHF 283
D + G + E + +P+N T+VYVG + +T+ ++ R F
Sbjct: 218 RRGGGFERDRERGERFHGGFEKTYDEIFHQTSPDN----TSVYVGQIG-SLTEDEIRRAF 272
Query: 284 HSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAI-QMGNTTQSSYLFGKQMKCSWG 338
GA I EVR+ + +G+ FV++ AA AI QM NT + G+ ++CSWG
Sbjct: 273 DRFGA--INEVRIFKLQGYAFVKFEQKEPAARAIVQMNNTE----IMGQMVRCSWG 322
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 50/224 (22%), Positives = 94/224 (41%), Gaps = 43/224 (19%)
Query: 39 IEPIPSGNLPPGFDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--- 95
+EP G+ D S V+VG++ +++ L+E F G V K+IR ++
Sbjct: 114 VEPNQPGDSSRKMDYSRHFHVFVGDLSSEIDSTKLKEAFLPFGEVSEAKIIRDTTTNKAK 173
Query: 96 -YGFIHYFDRRSAAMAILSLNGRHLFGQPIKVNWA------------------YASGQR- 135
YGF+ Y R A AI +NG+ L + I+ NWA G+R
Sbjct: 174 GYGFVSYPRREDAERAIEQMNGQWLGRRTIRTNWASRKPGEEGERRGGGFERDRERGERF 233
Query: 136 -------------EDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRS 182
+ + + +++VG + +T+ + F + + ++ R+ +
Sbjct: 234 HGGFEKTYDEIFHQTSPDNTSVYVGQIG-SLTEDEIRRAFDRFGAINEVRIF------KL 286
Query: 183 RGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNE 226
+G+ FV F ++ A AI + + + +RC+W G N+
Sbjct: 287 QGYAFVKFEQKEPAARAIVQMNNTEIMGQMVRCSWGKSGDAGNK 330
>gi|225713880|gb|ACO12786.1| Nucleolysin TIAR [Lepeophtheirus salmonis]
Length = 352
Score = 167 bits (423), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 109/298 (36%), Positives = 157/298 (52%), Gaps = 31/298 (10%)
Query: 57 RSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS-YGFIHYFDRRSAAMAILSLN 115
R++YVGN+ VTE L+ +F G V+GCK+IR+ S Y F+ + SAA A+ ++N
Sbjct: 11 RTLYVGNLDVAVTEDLVLALFGQLGAVKGCKIIREGASDPYCFVEFAHPASAAAALTAMN 70
Query: 116 GRHLFGQPIKVNWAYASGQ-----------REDTSGHFNIFVGDLSPEVTDATLFACFSV 164
R G+ +KVNWA + G + DTS H +IFVGDLSP++T TL F
Sbjct: 71 KRICLGKEMKVNWASSPGGSSDSVVHHNLPKPDTSQHHHIFVGDLSPDITTETLKNVFVP 130
Query: 165 YPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGN 224
+ SD +V+ D T +S+G+GFVSF + DAQ+AI + G+WLGSR IR NWA +
Sbjct: 131 FGEISDYKVVKDMLTNKSKGYGFVSFVEKNDAQTAIEQMNGQWLGSRAIRTNWAARKPPA 190
Query: 225 NEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFH 284
K +S+ + + ++ +P N TVY G L + + + F
Sbjct: 191 PYSKDTSNVNKL---------NFEDVYRQASPRN----FTVYCGGLINSDENI-IRQTFS 236
Query: 285 SLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSKPT 342
G I E+R RDKG+ FVR+ A AI S + G+ +KCSWG + T
Sbjct: 237 PFGR--ILEIRYFRDKGYAFVRFDNKESACNAIV---ALHGSNVQGQSVKCSWGKEST 289
Score = 39.3 bits (90), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 43/77 (55%), Gaps = 3/77 (3%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSSYGFIHYFDRRSAAMAILSLNGR 117
+VY G + E ++++ FS G + + R DK Y F+ + ++ SA AI++L+G
Sbjct: 217 TVYCGGL-INSDENIIRQTFSPFGRILEIRYFR-DKG-YAFVRFDNKESACNAIVALHGS 273
Query: 118 HLFGQPIKVNWAYASGQ 134
++ GQ +K +W S +
Sbjct: 274 NVQGQSVKCSWGKESTE 290
>gi|7446337|pir||T15542 hypothetical protein C18A3.5 - Caenorhabditis elegans
Length = 448
Score = 167 bits (423), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 108/327 (33%), Positives = 165/327 (50%), Gaps = 67/327 (20%)
Query: 57 RSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLI--------------RK----------- 91
R++YVGN+ + VTE + +F+ G V K+I RK
Sbjct: 46 RTLYVGNLDSTVTEDFIATLFNQIGSVTKTKVIFDVSFSLWNKTNLYRKLLLARGIGVPG 105
Query: 92 ----------------DKSSYGFIHYFDRRSAAMAILSLNGRHLFGQPIKVNWAYASGQR 135
Y F+ + D A+ A+ ++N R L + +KVNWA GQ+
Sbjct: 106 YKCTRRQPIHTDTETGSNDPYAFVEFSDHGQASQALQTMNKRLLLDREMKVNWAVEPGQQ 165
Query: 136 E---DTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRN 192
+ DT+ HF++FVGDLS EV + L F + SDA+V+ D T +S+G+GFVS+
Sbjct: 166 QSKIDTTRHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPK 225
Query: 193 QQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTN 252
+++A+ AI + G+WLG R IR NWAT+ G+ E + KS E+ N +S D
Sbjct: 226 REEAERAIEQMNGQWLGRRTIRTNWATRKPGDQEKPSHYNEKSYDEIYNQTSGDN----- 280
Query: 253 TEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAE 312
T+VYVGN+A +T+ ++ + F S G I EVR+ + +G+ FV++
Sbjct: 281 ----------TSVYVGNIAS-LTEDEIRQGFASFGR--ITEVRIFKMQGYAFVKFDNKDA 327
Query: 313 AALAI-QMGNTTQSSYLFGKQMKCSWG 338
AA AI QM N + G+ ++CSWG
Sbjct: 328 AAKAIVQMNNQD----VGGQLVRCSWG 350
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 104/234 (44%), Gaps = 37/234 (15%)
Query: 9 QQQQQQQALMQQALLQQQSLYHPGLLAAPQIEPIPSGNLPPGFDPSTCRSVYVGNIHTQV 68
Q Q Q + ++ LL ++ + +EP G D + V+VG++ ++V
Sbjct: 136 QASQALQTMNKRLLLDRE------MKVNWAVEP---GQQQSKIDTTRHFHVFVGDLSSEV 186
Query: 69 TEPLLQEVFSSTGPVEGCKLIRKDKSS----YGFIHYFDRRSAAMAILSLNGRHLFGQPI 124
L+E F G V K+IR ++ YGF+ Y R A AI +NG+ L + I
Sbjct: 187 DNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQMNGQWLGRRTI 246
Query: 125 KVNWAYASGQREDTSGHFN-----------------IFVGDLSPEVTDATLFACFSVYPS 167
+ NWA ++ H+N ++VG+++ +T+ + F+ +
Sbjct: 247 RTNWATRKPGDQEKPSHYNEKSYDEIYNQTSGDNTSVYVGNIAS-LTEDEIRQGFASFGR 305
Query: 168 CSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKG 221
++ R+ + +G+ FV F N+ A AI + + +G + +RC+W G
Sbjct: 306 ITEVRIF------KMQGYAFVKFDNKDAAAKAIVQMNNQDVGGQLVRCSWGKTG 353
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/248 (20%), Positives = 91/248 (36%), Gaps = 75/248 (30%)
Query: 144 IFVGDLSPEVTDATLFACFSVYPSCSDARV-------MW--------------------- 175
++VG+L VT+ + F+ S + +V +W
Sbjct: 48 LYVGNLDSTVTEDFIATLFNQIGSVTKTKVIFDVSFSLWNKTNLYRKLLLARGIGVPGYK 107
Query: 176 ---------DQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNE 226
D +TG + + FV F + A A+ + + L R+++ NWA
Sbjct: 108 CTRRQPIHTDTETGSNDPYAFVEFSDHGQASQALQTMNKRLLLDREMKVNWAV------- 160
Query: 227 DKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSL 286
E G++ + + ++ V+VG+L+ EV L F
Sbjct: 161 ------------------EPGQQQSKIDT----TRHFHVFVGDLSSEVDNQKLREAFQPF 198
Query: 287 G----AGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSKPT 342
G A VI + + KG+GFV Y EA AI+ N +L + ++ +W ++
Sbjct: 199 GDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQMN---GQWLGRRTIRTNWATR-- 253
Query: 343 PPGTSSNP 350
PG P
Sbjct: 254 KPGDQEKP 261
>gi|355724191|gb|AES08143.1| TIA1 cytotoxic granule-associated RNA binding protein-like 1
[Mustela putorius furo]
Length = 183
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 80/164 (48%), Positives = 117/164 (71%), Gaps = 3/164 (1%)
Query: 60 YVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRRSAAMAILSLNGR 117
YVGN+ VTE L+ ++FS GP + CK+I + S+ Y F+ +++ R AA A+ ++NGR
Sbjct: 1 YVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSNDPYCFVEFYEHRDAAAALAAMNGR 60
Query: 118 HLFGQPIKVNWAYA-SGQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWD 176
+ G+ +KVNWA S Q++DTS HF++FVGDLSPE+T + + F+ + SDARV+ D
Sbjct: 61 KILGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKD 120
Query: 177 QKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATK 220
TG+S+G+GFVSF N+ DA++AI + G+WLG RQIR NWAT+
Sbjct: 121 MATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATR 164
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 98/212 (46%), Gaps = 44/212 (20%)
Query: 145 FVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLT 204
+VG+LS +VT+ + FS C +++ + + + FV F +DA +A+ +
Sbjct: 1 YVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSNDP--YCFVEFYEHRDAAAALAAMN 58
Query: 205 GKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTT 264
G+ + ++++ NWAT S K+T+N +
Sbjct: 59 GRKILGKEVKVNWATT----------------------PSSQKKDTSN---------HFH 87
Query: 265 VYVGNLAPEVTQLDLHRHFHSLG----AGVIEEVRVQRDKGFGFVRYSTHAEAALAI-QM 319
V+VG+L+PE+T D+ F G A V++++ + KG+GFV + +A AI M
Sbjct: 88 VFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHM 147
Query: 320 GNTTQSSYLFGKQMKCSWGSK--PTPPGTSSN 349
G +L G+Q++ +W ++ P P T N
Sbjct: 148 G----GQWLGGRQIRTNWATRKPPAPKSTQEN 175
>gi|440297981|gb|ELP90622.1| nucleolysin TIA-1, putative [Entamoeba invadens IP1]
Length = 305
Score = 166 bits (419), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 102/310 (32%), Positives = 163/310 (52%), Gaps = 39/310 (12%)
Query: 36 APQIEPIPSGNLPPGFDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS 95
A +++ +P N +SV+V +H V E LL +FS G V CK++ KDK+
Sbjct: 27 ASEVQQVPFEN---------SKSVHVAGLHESVDETLLSRIFSIVGHVVSCKIM-KDKTG 76
Query: 96 ----YGFIHYFDRRSAAMAILSLNGRHLFGQPIKVNWAYASGQREDTSGHFNIFVGDLSP 151
YGFI + D +A A ++NGR ++G+ +KVNW + S + D G F +FVG L
Sbjct: 77 THARYGFIEFIDHTTAEFAKENMNGRLVYGKELKVNWTHDS--QSDAKGSFKLFVGGLHT 134
Query: 152 EVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSR 211
EVT+ L+ F+ + SDARV+ ++G+S+G+GFV+F ++DA++A+ + G+ + R
Sbjct: 135 EVTNEILYQNFAKFGRVSDARVLRYSQSGKSQGYGFVTFIRKEDAETAMQMMNGEKIQGR 194
Query: 212 QIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLA 271
++ NW T + K + G E +ET+NT NN VYVG +
Sbjct: 195 TVKVNWGT-----------ATQKPTETVKRGFDEISRETSNT----NN----NVYVGGIP 235
Query: 272 PEVTQLDLHRHFHSLGAGV-IEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFG 330
E + + + F G + ++ +R +K +GFVR+ +H A AI M N Q L G
Sbjct: 236 KETEESTMRKLFGDFGEIIDLKIMRTDAEKAYGFVRFVSHDNATKAIMMLNGYQ---LNG 292
Query: 331 KQMKCSWGSK 340
+ C WG +
Sbjct: 293 GCLNCMWGKE 302
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 48/97 (49%), Gaps = 7/97 (7%)
Query: 43 PSGNLPPGFDP------STCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKD-KSS 95
P+ + GFD +T +VYVG I + E ++++F G + K++R D + +
Sbjct: 207 PTETVKRGFDEISRETSNTNNNVYVGGIPKETEESTMRKLFGDFGEIIDLKIMRTDAEKA 266
Query: 96 YGFIHYFDRRSAAMAILSLNGRHLFGQPIKVNWAYAS 132
YGF+ + +A AI+ LNG L G + W S
Sbjct: 267 YGFVRFVSHDNATKAIMMLNGYQLNGGCLNCMWGKES 303
>gi|296085190|emb|CBI28685.3| unnamed protein product [Vitis vinifera]
Length = 146
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 82/110 (74%), Positives = 88/110 (80%), Gaps = 2/110 (1%)
Query: 294 VRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSKPTPPGTSSNPLPP 353
VRVQRD GFGFVRY+TH E +LAI MGNT S L GK + CSWGSKPTPPGTSSNPL
Sbjct: 38 VRVQRDGGFGFVRYNTHIETSLAIWMGNT--QSILCGKPIMCSWGSKPTPPGTSSNPLLL 95
Query: 354 PAAAPIPGLSAADLLAYERQIAMSKMGGVHALMHPQAQHPLKQAAMGVGS 403
AAAP+P LSA DL AYERQ+AMSKMGGVHALMHPQ QHP KQA M +G
Sbjct: 96 SAAAPLPSLSATDLRAYERQLAMSKMGGVHALMHPQGQHPFKQATMRMGC 145
>gi|71005326|ref|XP_757329.1| hypothetical protein UM01182.1 [Ustilago maydis 521]
gi|46096733|gb|EAK81966.1| hypothetical protein UM01182.1 [Ustilago maydis 521]
Length = 464
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 116/369 (31%), Positives = 166/369 (44%), Gaps = 87/369 (23%)
Query: 59 VYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKS---SYGFIHYFDRRSAAMAILSLN 115
V+V N+ TE L+E+F S G ++ +++ + +YGF+ Y D SA AI ++N
Sbjct: 31 VHVANLPATTTERALREMFGSLGQMQSARVVASRSAGGLAYGFVEYVDVASAERAIRTMN 90
Query: 116 GRHLFGQPIKVNWAYAS----------------GQREDTSGHFNIFVGDLSPEVTDATLF 159
G FG PIKV WA S G R H +FVGDLSP+V DA L
Sbjct: 91 GWVWFGTPIKVCWAKHSMHPDAVNEWVEVDRPVGMRSGVHSH--LFVGDLSPDVDDALLQ 148
Query: 160 ACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT 219
+ FS + S +D RVM+D TG+SRGFGF++FR++QDA I G+WL RQIR NWA
Sbjct: 149 SFFSRFTSLADVRVMYDAATGKSRGFGFINFRSKQDADDCIATCQGQWLRGRQIRVNWAN 208
Query: 220 K--------------------------------------GAGNNEDKQSSDAKSVVELTN 241
+ G S+ S L N
Sbjct: 209 QKNQPSQAPATLTPTATATATATCSAYSDTPLSLSHAGSGVSTKTSATPSELSSTSSLIN 268
Query: 242 GSS-------------EDGKETTNTEAPENNPQY-------------TTVYVGNLAPEVT 275
+S + +T T P N +Y T+VYVGN++P +
Sbjct: 269 DASLQVALPRRHTTLGSQPQLSTITRNPANILRYNYDRVVSEAPSSQTSVYVGNISPLTS 328
Query: 276 QLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKC 335
Q DL R F G E R+ +G+GFV +TH +AA AI + Q ++ + ++
Sbjct: 329 QQDLVRIFSPFAHGHHLEARIPPGRGYGFVTLNTHEQAASAI-CTLSIQGVFMHSRWLRF 387
Query: 336 SW-GSKPTP 343
W ++P+P
Sbjct: 388 GWQKNRPSP 396
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 86/208 (41%), Gaps = 32/208 (15%)
Query: 144 IFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDL 203
+ V +L T+ L F ARV+ + G +GFV + + A+ AI +
Sbjct: 31 VHVANLPATTTERALREMFGSLGQMQSARVVASRSAG-GLAYGFVEYVDVASAERAIRTM 89
Query: 204 TG-KWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQY 262
G W G+ I+ WA + + + V + +G +
Sbjct: 90 NGWVWFGT-PIKVCWAKHSMHPDAVNEWVEVDRPVGMRSGV------------------H 130
Query: 263 TTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRD------KGFGFVRYSTHAEAALA 316
+ ++VG+L+P+V L F + + +VRV D +GFGF+ + + +A
Sbjct: 131 SHLFVGDLSPDVDDALLQSFFSRFTS--LADVRVMYDAATGKSRGFGFINFRSKQDADDC 188
Query: 317 IQMGNTTQSSYLFGKQMKCSWGSKPTPP 344
I T Q +L G+Q++ +W ++ P
Sbjct: 189 IA---TCQGQWLRGRQIRVNWANQKNQP 213
Score = 40.0 bits (92), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 43/91 (47%), Gaps = 4/91 (4%)
Query: 48 PPGFDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKS----SYGFIHYFD 103
P G ++VG++ V + LLQ FS + +++ + +GFI++
Sbjct: 122 PVGMRSGVHSHLFVGDLSPDVDDALLQSFFSRFTSLADVRVMYDAATGKSRGFGFINFRS 181
Query: 104 RRSAAMAILSLNGRHLFGQPIKVNWAYASGQ 134
++ A I + G+ L G+ I+VNWA Q
Sbjct: 182 KQDADDCIATCQGQWLRGRQIRVNWANQKNQ 212
>gi|268533576|ref|XP_002631916.1| Hypothetical protein CBG07904 [Caenorhabditis briggsae]
Length = 411
Score = 161 bits (408), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 99/310 (31%), Positives = 161/310 (51%), Gaps = 39/310 (12%)
Query: 57 RSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS-YGFIHYFDRRSAAMAILSLN 115
R+++VGN+ +T+ L +F+ G V K+ + + FI + D A A+ ++N
Sbjct: 37 RTLFVGNLDPAITDEFLATLFNQIGAVTKAKVCFDGMNDPFAFIEFGDHNQAGQALQAMN 96
Query: 116 GRHLFGQPIKVNWAYASGQ-----REDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSD 170
GR L + ++VNWA + Q +++TS HF++FVGDLS EV L F + S+
Sbjct: 97 GRSLLDREMRVNWAVDASQPGDSRKQETSRHFHVFVGDLSSEVDSTKLREAFLAFGDVSE 156
Query: 171 ARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQS 230
A+++ D T +++G+GFVS+ ++DA+ AI + G+WLG R IR NWAT+ +
Sbjct: 157 AKIIRDTATNKAKGYGFVSYPRREDAERAIEQMNGQWLGRRTIRTNWATRKPEEEGGGER 216
Query: 231 SDA----------KSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLH 280
D K+ E+ N +S D T+VYVG + ++T+ ++
Sbjct: 217 RDRGERGERRHYEKTFDEIYNQTSADN---------------TSVYVGQI-NQLTEDEIR 260
Query: 281 RHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAI-QMGNTTQSSYLFGKQMKCSWGS 339
R F G I EVR+ + +G+ FV++ AA AI QM N + G+Q++CSWG
Sbjct: 261 RAFDRFGP--INEVRMFKVQGYAFVKFEQKEAAARAIVQMNNAE----IQGQQVRCSWGK 314
Query: 340 KPTPPGTSSN 349
+ SN
Sbjct: 315 SGESSASKSN 324
>gi|260943169|ref|XP_002615883.1| hypothetical protein CLUG_04765 [Clavispora lusitaniae ATCC 42720]
gi|238851173|gb|EEQ40637.1| hypothetical protein CLUG_04765 [Clavispora lusitaniae ATCC 42720]
Length = 385
Score = 161 bits (408), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 114/344 (33%), Positives = 161/344 (46%), Gaps = 57/344 (16%)
Query: 57 RSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIR---KDKSSYGFIHYFDRRSAAMAILS 113
+ +YVG + + E L E FS++GPV K++ K +Y F+ + D AA A+
Sbjct: 44 KVLYVGGLPKSINEDALNEKFSASGPVFSVKILNDKNKQGFNYAFVEFVDEAGAAAALQE 103
Query: 114 LNGRHLFGQPIKVNWAYASGQREDTSGH----FNIFVGDLSPEVTDATLFACFSVYPSCS 169
NG +K+N+AY S T +NIFVGDLSPEV D +L FS + S
Sbjct: 104 FNGSSFENSMLKINYAYQSSTFNATQNSDDPTYNIFVGDLSPEVDDESLHKFFSAFESLK 163
Query: 170 DARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWA------TKGA- 222
A VMWD +T RSRG+GFV+F N DA++A++ + GK L R IRCNWA ++GA
Sbjct: 164 QAHVMWDMQTSRSRGYGFVTFANLADAETALSTMNGKVLNGRAIRCNWASHKQQNSRGAP 223
Query: 223 ---------------GNNED-----KQSSDAKSVVELTNGSSEDGKETTNTEAPEN---- 258
G NE +Q++ + L ++ + N N
Sbjct: 224 RQNNQRQFRPQYQRPGFNESPVPMPEQNNFGDAQFSLPQRPQQEQQMMPNLAMGPNTGVM 283
Query: 259 -----------NPQYTT-VYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVR 306
P + T VY+GN+A Q DL + G I + + +KG FV+
Sbjct: 284 SPHSFDIVLRQTPSWQTTVYLGNIAHFTQQNDLIPLLQNF--GYIVDFKFHPEKGCAFVK 341
Query: 307 YSTHAEAALAI-QMGNTTQSSYLFGKQMKCSWGSKPTPPGTSSN 349
Y TH AALAI Q+ + G+Q+KC WG P G N
Sbjct: 342 YDTHERAALAIVQLSGFN----VNGRQLKCGWGKSRPPMGQFQN 381
>gi|395841399|ref|XP_003793527.1| PREDICTED: LOW QUALITY PROTEIN: nucleolysin TIA-1 isoform p40,
partial [Otolemur garnettii]
Length = 480
Score = 160 bits (406), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 114/348 (32%), Positives = 164/348 (47%), Gaps = 74/348 (21%)
Query: 57 RSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSSYGFIHYFDRRSAAMAILSLNG 116
+++YVGN+ VTE L+ ++FS GP + CK+I D G + + A + L
Sbjct: 43 KTLYVGNLSRDVTEALILQLFSQIGPCKNCKMI-MDVRPAGHMWPAEDIYLARQVFLLPP 101
Query: 117 RHLF-----------------GQPIKVNWAYA-SGQREDTSG-----------HFNIFVG 147
R L +KVNWA S Q++DTS HF++FVG
Sbjct: 102 RVLLCSRLVLGPQSRPVVRPSNSEVKVNWATTPSSQKKDTSSSTVVSTQRSQDHFHVFVG 161
Query: 148 DLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKW 207
DLSPE+T + A F+ + SDARV+ D TG+S+G+GFVSF N+ DA++AI + G+W
Sbjct: 162 DLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQW 221
Query: 208 LGSRQIRCNWATKGAGN----------NEDKQ-------------------------SSD 232
LG RQIR NWAT+ E+K+
Sbjct: 222 LGGRQIRTNWATRKPPAPKSTYECRCIGEEKEMWNFGEKYTRFKCXSCSRRLIAEIDEKQ 281
Query: 233 AKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIE 292
K+ V+ +N E N +P N TVY G + +T+ + + F G I
Sbjct: 282 IKTTVQKSNTKQLSYDEVVNQSSPSN----CTVYCGGVTSGLTEQLMRQTFSPFGQ--IM 335
Query: 293 EVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSK 340
E+RV DKG+ FVR+++H AA AI N T + G +KC WG +
Sbjct: 336 EIRVFPDKGYSFVRFNSHESAAHAIVSVNGTT---IEGHVVKCYWGKE 380
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 100/207 (48%), Gaps = 21/207 (10%)
Query: 144 IFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDL 203
++VG+LS +VT+A + FS C + +++ D R G + + +D A
Sbjct: 45 LYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDV---RPAGHMWPA----EDIYLARQVF 97
Query: 204 TGKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTE--APENNPQ 261
L R + C+ G + + S+++ V S K+T+++ + + +
Sbjct: 98 L---LPPRVLLCSRLVLGPQSRPVVRPSNSEVKVNWATTPSSQKKDTSSSTVVSTQRSQD 154
Query: 262 YTTVYVGNLAPEVTQLDLHRHFHSLG----AGVIEEVRVQRDKGFGFVRYSTHAEAALAI 317
+ V+VG+L+PE+T D+ F G A V++++ + KG+GFV + +A AI
Sbjct: 155 HFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAI 214
Query: 318 -QMGNTTQSSYLFGKQMKCSWGSKPTP 343
QMG +L G+Q++ +W ++ P
Sbjct: 215 QQMG----GQWLGGRQIRTNWATRKPP 237
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 3/77 (3%)
Query: 53 PSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSSYGFIHYFDRRSAAMAIL 112
PS C +VY G + + +TE L+++ FS G + ++ DK Y F+ + SAA AI+
Sbjct: 305 PSNC-TVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVF-PDKG-YSFVRFNSHESAAHAIV 361
Query: 113 SLNGRHLFGQPIKVNWA 129
S+NG + G +K W
Sbjct: 362 SVNGTTIEGHVVKCYWG 378
>gi|50408254|ref|XP_456766.1| DEHA2A10010p [Debaryomyces hansenii CBS767]
gi|49652430|emb|CAG84729.1| DEHA2A10010p [Debaryomyces hansenii CBS767]
Length = 463
Score = 158 bits (399), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 115/363 (31%), Positives = 165/363 (45%), Gaps = 70/363 (19%)
Query: 57 RSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKS----SYGFIHYFDRRSAAMAIL 112
+ +YVG +H V++ +L+++F+ G ++ K++ DK+ +Y FI + + +SA MA+
Sbjct: 98 KILYVGGLHKSVSDEMLKDLFAVAGAIQSVKIL-NDKNRPGFNYAFIEFENTQSADMALH 156
Query: 113 SLNGRHLFGQPIKVNWAYASGQREDTSGH---FNIFVGDLSPEVTDATLFACFSVYPSCS 169
+LNGR + IK+NWAY S + FNIFVGDLSPEV D TL FS +PS
Sbjct: 157 TLNGRIINNSEIKINWAYQSSTISSLNPDEPTFNIFVGDLSPEVDDETLNKSFSKFPSLK 216
Query: 170 DARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT-----KGAGN 224
A VMWD +T RSRG+GFVSF Q DA+ A+ + G+W+ R IRCNWA+
Sbjct: 217 QAHVMWDMQTSRSRGYGFVSFGQQADAELALQTMNGEWISGRAIRCNWASHKQLNNNNNY 276
Query: 225 NEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLD------ 278
+ + N + + N P N Q+ GN+ P QL
Sbjct: 277 RNNNRHHQNNRQFRPFNNAIPQQLQNQNNGMPIGNGQFNPNQQGNMPPSQQQLHNVPQAN 336
Query: 279 --------------------LHRHFHS----LGAGVIEEVRVQRD-----KGFGFV---- 305
+ R S + G I Q D + FGF+
Sbjct: 337 NSNNGNQANIPVMSPQSYDIVLRQTPSWQTTVYLGNIAHFTQQTDLIPLLQNFGFIVDFK 396
Query: 306 ----------RYSTHAEAALAI-QMGNTTQSSYLFGKQMKCSWGSKPTPPGTSSN---PL 351
+Y +H AALAI Q+ T + G+ +KC WG P G N +
Sbjct: 397 FHPERGCAFVKYDSHERAALAIVQLAGFT----INGRPLKCGWGKDRPPMGQFQNFGRGV 452
Query: 352 PPP 354
PPP
Sbjct: 453 PPP 455
>gi|308475439|ref|XP_003099938.1| hypothetical protein CRE_24556 [Caenorhabditis remanei]
gi|308266205|gb|EFP10158.1| hypothetical protein CRE_24556 [Caenorhabditis remanei]
Length = 408
Score = 157 bits (397), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 97/298 (32%), Positives = 157/298 (52%), Gaps = 27/298 (9%)
Query: 57 RSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLI----RKDKSSYGFIHYFDRRSAAMAIL 112
R+++VGN+ +T+ L +F+ G V K+I + + F+ + D A+ A+
Sbjct: 38 RTLFVGNLDPAITDEFLATLFNQIGAVTKAKIIFDCFQGLNDPFAFVEFSDHNQASQALQ 97
Query: 113 SLNGRHLFGQPIKVNWAYASGQ-----REDTSGHFNIFVGDLSPEVTDATLFACFSVYPS 167
S+NGR L + ++VNWA Q + +TS HF++FVGDLS E+ L F +
Sbjct: 98 SMNGRQLLEREMRVNWAVEPNQPGDRNKPETSRHFHVFVGDLSAEIDSTKLREAFLPFGE 157
Query: 168 CSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATK------- 220
S+A+++ D T +++G+GFVS+ ++DA+ AI + G+WLG R IR NWAT+
Sbjct: 158 VSEAKIIRDNATNKAKGYGFVSYPRREDAERAIEQMNGQWLGRRTIRTNWATRKPEEEGG 217
Query: 221 GAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLH 280
+ + D E + E + EA +N T+VYVGN+ +T+ ++
Sbjct: 218 ERRERDRNERGDRPHRGEGRHHHFEKTYDEVFREAAADN---TSVYVGNIN-SLTEDEIR 273
Query: 281 RHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAI-QMGNTTQSSYLFGKQMKCSW 337
R F G I EVR+ + +G+ FV++ AA AI QM N S G+ ++CSW
Sbjct: 274 RGFERFGQ--IVEVRIFKSQGYAFVKFEQKESAARAIVQMNNQDVS----GQMVRCSW 325
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 88/208 (42%), Gaps = 49/208 (23%)
Query: 53 PSTCRS--VYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS----YGFIHYFDRRS 106
P T R V+VG++ ++ L+E F G V K+IR + ++ YGF+ Y R
Sbjct: 126 PETSRHFHVFVGDLSAEIDSTKLREAFLPFGEVSEAKIIRDNATNKAKGYGFVSYPRRED 185
Query: 107 AAMAILSLNGRHLFGQPIKVNWA------------------------------------Y 130
A AI +NG+ L + I+ NWA Y
Sbjct: 186 AERAIEQMNGQWLGRRTIRTNWATRKPEEEGGERRERDRNERGDRPHRGEGRHHHFEKTY 245
Query: 131 ASGQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSF 190
RE + + +++VG+++ +T+ + F + + R+ +S+G+ FV F
Sbjct: 246 DEVFREAAADNTSVYVGNIN-SLTEDEIRRGFERFGQIVEVRIF------KSQGYAFVKF 298
Query: 191 RNQQDAQSAINDLTGKWLGSRQIRCNWA 218
++ A AI + + + + +RC+W
Sbjct: 299 EQKESAARAIVQMNNQDVSGQMVRCSWG 326
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 47/91 (51%), Gaps = 7/91 (7%)
Query: 264 TVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDKG----FGFVRYSTHAEAALAIQM 319
T++VGNL P +T L F+ +GA ++ +G F FV +S H +A+ A+Q
Sbjct: 39 TLFVGNLDPAITDEFLATLFNQIGAVTKAKIIFDCFQGLNDPFAFVEFSDHNQASQALQS 98
Query: 320 GNTTQSSYLFGKQMKCSWGSKPTPPGTSSNP 350
N Q L ++M+ +W +P PG + P
Sbjct: 99 MNGRQ---LLEREMRVNWAVEPNQPGDRNKP 126
>gi|17531963|ref|NP_495120.1| Protein TIAR-1, isoform b [Caenorhabditis elegans]
gi|373219011|emb|CCD65016.1| Protein TIAR-1, isoform b [Caenorhabditis elegans]
Length = 376
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 100/286 (34%), Positives = 150/286 (52%), Gaps = 57/286 (19%)
Query: 57 RSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSSYGFIHYFDRRSAAMAILSLNG 116
R++YVGN+ + VTE + +F+ G V K+I FD
Sbjct: 46 RTLYVGNLDSTVTEDFIATLFNQIGSVTKTKVI------------FDE------------ 81
Query: 117 RHLFGQPIKVNWAYASGQRE---DTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARV 173
+KVNWA GQ++ DT+ HF++FVGDLS EV + L F + SDA+V
Sbjct: 82 -------MKVNWAVEPGQQQSKIDTTRHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKV 134
Query: 174 MWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSSDA 233
+ D T +S+G+GFVS+ +++A+ AI + G+WLG R IR NWAT+ G+ E +
Sbjct: 135 IRDTNTTKSKGYGFVSYPKREEAERAIEQMNGQWLGRRTIRTNWATRKPGDQEKPSHYNE 194
Query: 234 KSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEE 293
KS E+ N +S D T+VYVGN+A +T+ ++ + F S G I E
Sbjct: 195 KSYDEIYNQTSGDN---------------TSVYVGNIAS-LTEDEIRQGFASFGR--ITE 236
Query: 294 VRVQRDKGFGFVRYSTHAEAALAI-QMGNTTQSSYLFGKQMKCSWG 338
VR+ + +G+ FV++ AA AI QM N + G+ ++CSWG
Sbjct: 237 VRIFKMQGYAFVKFDNKDAAAKAIVQMNNQD----VGGQLVRCSWG 278
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 87/184 (47%), Gaps = 28/184 (15%)
Query: 59 VYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS----YGFIHYFDRRSAAMAILSL 114
V+VG++ ++V L+E F G V K+IR ++ YGF+ Y R A AI +
Sbjct: 105 VFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQM 164
Query: 115 NGRHLFGQPIKVNWAYASGQREDTSGHFN-----------------IFVGDLSPEVTDAT 157
NG+ L + I+ NWA ++ H+N ++VG+++ +T+
Sbjct: 165 NGQWLGRRTIRTNWATRKPGDQEKPSHYNEKSYDEIYNQTSGDNTSVYVGNIAS-LTEDE 223
Query: 158 LFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNW 217
+ F+ + ++ R+ + +G+ FV F N+ A AI + + +G + +RC+W
Sbjct: 224 IRQGFASFGRITEVRIF------KMQGYAFVKFDNKDAAAKAIVQMNNQDVGGQLVRCSW 277
Query: 218 ATKG 221
G
Sbjct: 278 GKTG 281
>gi|16198525|gb|AAH15944.1| TIA1 protein [Homo sapiens]
gi|119620232|gb|EAW99826.1| TIA1 cytotoxic granule-associated RNA binding protein, isoform
CRA_d [Homo sapiens]
gi|119620233|gb|EAW99827.1| TIA1 cytotoxic granule-associated RNA binding protein, isoform
CRA_d [Homo sapiens]
Length = 214
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 80/178 (44%), Positives = 117/178 (65%), Gaps = 14/178 (7%)
Query: 57 RSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRRSAAMAILSL 114
+++YVGN+ VTE L+ ++FS GP + CK+I + Y F+ + + R AA A+ ++
Sbjct: 7 KTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFHEHRHAAAALAAM 66
Query: 115 NGRHLFGQPIKVNWAYA-SGQREDTSG-----------HFNIFVGDLSPEVTDATLFACF 162
NGR + G+ +KVNWA S Q++DTS HF++FVGDLSPE+T + A F
Sbjct: 67 NGRKIMGKEVKVNWATTPSSQKKDTSSSTVVSTQRSQDHFHVFVGDLSPEITTEDIKAAF 126
Query: 163 SVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATK 220
+ + SDARV+ D TG+S+G+GFVSF N+ DA++AI + G+WLG RQIR NWAT+
Sbjct: 127 APFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATR 184
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 103/210 (49%), Gaps = 31/210 (14%)
Query: 144 IFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDL 203
++VG+LS +VT+A + FS C + +++ D T + + FV F + A +A+ +
Sbjct: 9 LYVGNLSRDVTEALILQLFSQIGPCKNCKMIMD--TAGNDPYCFVEFHEHRHAAAALAAM 66
Query: 204 TGKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYT 263
G+ + ++++ NWAT + +D SS S + + +
Sbjct: 67 NGRKIMGKEVKVNWATTPSSQKKDTSSSTVVST--------------------QRSQDHF 106
Query: 264 TVYVGNLAPEVTQLDLHRHFHSLG----AGVIEEVRVQRDKGFGFVRYSTHAEAALAI-Q 318
V+VG+L+PE+T D+ F G A V++++ + KG+GFV + +A AI Q
Sbjct: 107 HVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQ 166
Query: 319 MGNTTQSSYLFGKQMKCSWGSKPTPPGTSS 348
MG +L G+Q++ +W ++ P S+
Sbjct: 167 MG----GQWLGGRQIRTNWATRKPPAPKST 192
>gi|297301957|ref|XP_001098541.2| PREDICTED: nucleolysin TIAR isoform 5 [Macaca mulatta]
Length = 506
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 90/218 (41%), Positives = 129/218 (59%), Gaps = 19/218 (8%)
Query: 124 IKVNWAYA-SGQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRS 182
+KVNWA S Q++DTS HF++FVGDLSPE+T + + F+ + SDARV+ D TG+S
Sbjct: 209 VKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKS 268
Query: 183 RGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNG 242
+G+GFVSF N+ DA++AI + G+WLG RQIR NWAT+ + Q ++ K +
Sbjct: 269 KGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQENNTKQL------ 322
Query: 243 SSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDKGF 302
++ N +P+N TVY G +A +T + + F G I E+RV +KG+
Sbjct: 323 ---RFEDVVNQSSPKN----CTVYCGGIASGLTDQLMRQTFSPFGQ--IMEIRVFPEKGY 373
Query: 303 GFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSK 340
FVR+STH AA AI N T + G +KC WG +
Sbjct: 374 SFVRFSTHESAAHAIVSVNGTT---IEGHVVKCYWGKE 408
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/204 (21%), Positives = 86/204 (42%), Gaps = 29/204 (14%)
Query: 52 DPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRK----DKSSYGFIHYFDRRSA 107
D S V+VG++ ++T ++ F+ G + ++++ YGF+ ++++ A
Sbjct: 223 DTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDA 282
Query: 108 AMAILSLNGRHLFGQPIKVNWAY------ASGQREDTS-------------GHFNIFVGD 148
AI+ + G+ L G+ I+ NWA S Q +T + ++ G
Sbjct: 283 ENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYCGG 342
Query: 149 LSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWL 208
++ +TD + FS + + RV +G+ FV F + A AI + G +
Sbjct: 343 IASGLTDQLMRQTFSPFGQIMEIRVF------PEKGYSFVRFSTHESAAHAIVSVNGTTI 396
Query: 209 GSRQIRCNWATKGAGNNEDKQSSD 232
++C W + ++ Q D
Sbjct: 397 EGHVVKCYWGKESPDMTKNFQQVD 420
>gi|344301362|gb|EGW31674.1| hypothetical protein SPAPADRAFT_62285 [Spathaspora passalidarum
NRRL Y-27907]
Length = 478
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 78/182 (42%), Positives = 114/182 (62%), Gaps = 13/182 (7%)
Query: 57 RSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKS----SYGFIHYFDRRSAAMAIL 112
+ +YVGN+ ++E L++ F+S G ++ K++ DK+ +Y FI Y + ++A MA+
Sbjct: 71 KILYVGNLSKSISEEFLKDTFASAGAIQSVKIL-NDKNKPGFNYAFIEYENNQAADMALN 129
Query: 113 SLNGRHLFGQPIKVNWAYASGQR------EDTSGHFNIFVGDLSPEVTDATLFACFSVYP 166
++NG+ L IK+NWA+ S ED S FNIFVGDLSPE+ D L FS +
Sbjct: 130 TMNGKILQNFEIKINWAFQSATITTANTPEDPS--FNIFVGDLSPEINDEKLKQAFSKFK 187
Query: 167 SCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNE 226
S A VMWD +T RSRG+GFV+F NQ DA+ A+ + G+WL R IRCNWA+ NN+
Sbjct: 188 SLKQAHVMWDMQTSRSRGYGFVTFSNQSDAELALQTMNGEWLNGRAIRCNWASHKQLNNQ 247
Query: 227 DK 228
++
Sbjct: 248 NQ 249
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 94/200 (47%), Gaps = 36/200 (18%)
Query: 144 IFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDL 203
++VG+LS +++ L F+ + +++ D K + F+ + N Q A A+N +
Sbjct: 73 LYVGNLSKSISEEFLKDTFASAGAIQSVKILND-KNKPGFNYAFIEYENNQAADMALNTM 131
Query: 204 TGKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYT 263
GK L + +I+ NWA + A T PE+ P +
Sbjct: 132 NGKILQNFEIKINWAFQSA--------------------------TITTANTPED-PSFN 164
Query: 264 TVYVGNLAPEVTQLDLHRHFHSLG----AGVIEEVRVQRDKGFGFVRYSTHAEAALAIQM 319
++VG+L+PE+ L + F A V+ +++ R +G+GFV +S ++A LA+Q
Sbjct: 165 -IFVGDLSPEINDEKLKQAFSKFKSLKQAHVMWDMQTSRSRGYGFVTFSNQSDAELALQ- 222
Query: 320 GNTTQSSYLFGKQMKCSWGS 339
T +L G+ ++C+W S
Sbjct: 223 --TMNGEWLNGRAIRCNWAS 240
Score = 45.4 bits (106), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 40/77 (51%), Gaps = 7/77 (9%)
Query: 263 TTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAI-QMGN 321
TTVY+GN+A Q DL + G I + + ++G FV+Y H AALAI Q+
Sbjct: 363 TTVYLGNIAHFTQQGDLIPLLTNFG--YIVDFKFHPERGCAFVKYDNHERAALAIVQLAG 420
Query: 322 TTQSSYLFGKQMKCSWG 338
+ G+ +KC WG
Sbjct: 421 FN----INGRPLKCGWG 433
Score = 45.1 bits (105), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 52/92 (56%), Gaps = 8/92 (8%)
Query: 42 IPSGNLPPGFDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS----YG 97
I + N P DPS +++VG++ ++ + L++ FS ++ ++ ++S YG
Sbjct: 152 ITTANTPE--DPSF--NIFVGDLSPEINDEKLKQAFSKFKSLKQAHVMWDMQTSRSRGYG 207
Query: 98 FIHYFDRRSAAMAILSLNGRHLFGQPIKVNWA 129
F+ + ++ A +A+ ++NG L G+ I+ NWA
Sbjct: 208 FVTFSNQSDAELALQTMNGEWLNGRAIRCNWA 239
Score = 42.4 bits (98), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 57/128 (44%), Gaps = 21/128 (16%)
Query: 232 DAKSVVELTNGSS-EDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGV 290
D K +T S+ E G+E +N +YVGNL+ +++ L F S AG
Sbjct: 49 DTKETTPITPASAVEGGREVSNK----------ILYVGNLSKSISEEFLKDTFAS--AGA 96
Query: 291 IEEVRVQRDK-----GFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSKPTPPG 345
I+ V++ DK + F+ Y + A +A+ NT L ++K +W +
Sbjct: 97 IQSVKILNDKNKPGFNYAFIEYENNQAADMAL---NTMNGKILQNFEIKINWAFQSATIT 153
Query: 346 TSSNPLPP 353
T++ P P
Sbjct: 154 TANTPEDP 161
>gi|17537143|ref|NP_496718.1| Protein TIAR-2 [Caenorhabditis elegans]
gi|6425313|emb|CAB60356.1| Protein TIAR-2 [Caenorhabditis elegans]
Length = 434
Score = 154 bits (390), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 97/297 (32%), Positives = 157/297 (52%), Gaps = 26/297 (8%)
Query: 57 RSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS-YGFIHYFDRRSAAMAILSLN 115
R+++V N+ +T+ L +F+ G V K+I + + Y F+ + D A +A+ S N
Sbjct: 40 RTLFVANLDPAITDEFLATLFNQIGAVMKAKIIFEGLNDPYAFVEFSDHNQATLALQSHN 99
Query: 116 GRHLFGQPIKVNWAYA------SGQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCS 169
GR L + + V WA+ + + +TS HF++FVGDL E+ L F + S
Sbjct: 100 GRELLEKEMHVTWAFEPREPGENRSKPETSRHFHVFVGDLCSEIDSTKLREAFVKFGEVS 159
Query: 170 DARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATK-------GA 222
+A+++ D T + +G+GFVS+ ++DA+ AI+++ G WLG R IR NWAT+
Sbjct: 160 EAKIIRDNNTNKGKGYGFVSYPRREDAERAIDEMNGAWLGRRTIRTNWATRKPDEDGERG 219
Query: 223 GNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRH 282
G+ D++ N S + E N A +N T+VYVGN+A + + ++ R
Sbjct: 220 GDRGDRRGGGGGGRDRYHNQSEKTYDEIFNQAAADN----TSVYVGNIA-NLGEDEIRRA 274
Query: 283 FHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAI-QMGNTTQSSYLFGKQMKCSWG 338
F G I EVR + +G+ FV++ T AA AI QM N + G+ ++CSWG
Sbjct: 275 FDRFGP--INEVRTFKIQGYAFVKFETKESAARAIVQMNNAD----IGGQIVRCSWG 325
>gi|332226897|ref|XP_003262629.1| PREDICTED: nucleolysin TIA-1 isoform p40 [Nomascus leucogenys]
Length = 411
Score = 154 bits (390), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 104/298 (34%), Positives = 154/298 (51%), Gaps = 44/298 (14%)
Query: 57 RSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRRSAAMAILSL 114
+++YVGN+ VTE L+ ++FS GP + CK+I + Y F+ + + R AA A+ ++
Sbjct: 44 KTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFHEHRHAAAALAAM 103
Query: 115 NGRHLFGQPIKVNWAYA-SGQREDTSG-----------HFNIFVGDLSPEVTDATLFACF 162
NGR + G+ +KVNWA S Q++DTS HF++FVGDLSPE+T + A F
Sbjct: 104 NGRKIMGKEVKVNWATTPSSQKKDTSSSTVVSTQRSQDHFHVFVGDLSPEITTEDIKAAF 163
Query: 163 SVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGA 222
+ + S S F + DA++AI + G+WLG RQIR NWAT+
Sbjct: 164 APFGRIS------------SNQFYMNAIIKFSDAENAIQQMGGQWLGGRQIRTNWATRKP 211
Query: 223 GNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRH 282
+ S+ K + S D E N +P N TVY G + +T+ + +
Sbjct: 212 PAPKSTYESNTKQL-------SYD--EVVNQSSPSN----CTVYCGGVTSGLTEQLMRQT 258
Query: 283 FHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSK 340
F G I E+RV DKG+ FVR+++H AA AI N T + G +KC WG +
Sbjct: 259 FSPFGQ--IMEIRVFPDKGYSFVRFNSHESAAHAIVSVNGTT---IEGHVVKCYWGKE 311
>gi|190345927|gb|EDK37898.2| hypothetical protein PGUG_01996 [Meyerozyma guilliermondii ATCC
6260]
Length = 397
Score = 154 bits (389), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 107/313 (34%), Positives = 151/313 (48%), Gaps = 33/313 (10%)
Query: 59 VYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSSYGFIHYFDRRSAAMAILSLNGRH 118
+YVGNI V E L E+F T V+ K +Y F+ + R A + + NG
Sbjct: 80 LYVGNIPKTVNEQYLHELFDKTKSVKLLHDKNKPGFNYAFVEFDTREDAESVLTAFNGSE 139
Query: 119 LFGQPIKVNWAYASGQREDTSGH----FNIFVGDLSPEVTDATLFACFSVYPSCSDARVM 174
+ G IK+NWAY S +S + IFVGDLS EV D TL F +PS A VM
Sbjct: 140 VGGSSIKINWAYQSSTISTSSSPESPLYTIFVGDLSAEVDDETLGKAFDQFPSRKQAHVM 199
Query: 175 WDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT------KGAGNNEDK 228
WD +T RSRG+GFVSF + +A++A+ + G ++G R IRCNWA+ K K
Sbjct: 200 WDMQTSRSRGYGFVSFADPAEAENALVTMPGSFIGGRAIRCNWASHRHMYQKKNTRPPPK 259
Query: 229 QSSDAKSVVELTNGSSEDGKETTNTEAPENNPQY---------------TTVYVGNLAPE 273
+S+ A + + +++ TN PQ TTVY+GN+A
Sbjct: 260 RSASAGATTPPSPYTAQGYPIDTNNGGRNPQPQAPKSFEVVLRQAPNWQTTVYLGNIAHF 319
Query: 274 VTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAI-QMGNTTQSSYLFGKQ 332
DL + G I + + KG FV+Y +H AALAI Q+ + + G+
Sbjct: 320 THSSDLIPLLQNF--GFIVDFKFHPSKGCAFVKYDSHERAALAIVQLAGYS----VNGRP 373
Query: 333 MKCSWG-SKPTPP 344
+KC WG +P P
Sbjct: 374 LKCGWGRDRPIAP 386
>gi|406606542|emb|CCH42041.1| Nuclear and cytoplasmic polyadenylated RNA-binding protein PUB1
[Wickerhamomyces ciferrii]
Length = 482
Score = 154 bits (389), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 73/166 (43%), Positives = 105/166 (63%), Gaps = 3/166 (1%)
Query: 57 RSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLI---RKDKSSYGFIHYFDRRSAAMAILS 113
+ +YVG + ++E L+E+FS G ++ K++ K +Y FI + + +A+ A
Sbjct: 102 KILYVGGLDKTISEDQLREIFSQHGEIDNVKILFDKNKQNFNYAFIEFQNELNASNAFQE 161
Query: 114 LNGRHLFGQPIKVNWAYASGQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARV 173
LN + L I +NWAY S Q +++S HFNIFVGDLS E+ D L A F+ Y S A V
Sbjct: 162 LNNKTLQNSVISINWAYQSQQAKNSSEHFNIFVGDLSTEIDDEQLKAAFNEYKSLVQAHV 221
Query: 174 MWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT 219
MWD ++GRSRG+GFVSF NQQDA+ A+ G +G+RQ+R NWA+
Sbjct: 222 MWDMQSGRSRGYGFVSFTNQQDAELALTTKQGSQIGNRQVRLNWAS 267
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 93/200 (46%), Gaps = 40/200 (20%)
Query: 144 IFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDL 203
++VG L +++ L FS + + ++++D K ++ + F+ F+N+ +A +A +L
Sbjct: 104 LYVGGLDKTISEDQLREIFSQHGEIDNVKILFD-KNKQNFNYAFIEFQNELNASNAFQEL 162
Query: 204 TGKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYT 263
K L + I NWA QS AK N+ ++
Sbjct: 163 NNKTLQNSVISINWAY---------QSQQAK-----------------------NSSEHF 190
Query: 264 TVYVGNLAPEVTQLDLHRHFHS----LGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQM 319
++VG+L+ E+ L F+ + A V+ +++ R +G+GFV ++ +A LA+
Sbjct: 191 NIFVGDLSTEIDDEQLKAAFNEYKSLVQAHVMWDMQSGRSRGYGFVSFTNQQDAELAL-- 248
Query: 320 GNTTQSSYLFGKQMKCSWGS 339
T Q S + +Q++ +W S
Sbjct: 249 -TTKQGSQIGNRQVRLNWAS 267
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 42/78 (53%), Gaps = 9/78 (11%)
Query: 263 TTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNT 322
TTVY+GNL P TQ DL + G I +++ ++K F++Y +H AALAI
Sbjct: 391 TTVYLGNLTPYTTQNDLIPLVQNFG--YIVDLKFHQEKNCAFIKYDSHERAALAI----- 443
Query: 323 TQSSYLF--GKQMKCSWG 338
Q S L G+ +K WG
Sbjct: 444 VQLSGLIINGRPLKTGWG 461
Score = 39.3 bits (90), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 39/76 (51%), Gaps = 2/76 (2%)
Query: 53 PSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSSYGFIHYFDRRSAAMAIL 112
PS +VY+GN+ T+ L + + G + K ++ + FI Y AA+AI+
Sbjct: 387 PSWLTTVYLGNLTPYTTQNDLIPLVQNFGYIVDLKFHQEKNCA--FIKYDSHERAALAIV 444
Query: 113 SLNGRHLFGQPIKVNW 128
L+G + G+P+K W
Sbjct: 445 QLSGLIINGRPLKTGW 460
>gi|385305500|gb|EIF49466.1| pub1p [Dekkera bruxellensis AWRI1499]
Length = 489
Score = 154 bits (389), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 76/167 (45%), Positives = 107/167 (64%), Gaps = 5/167 (2%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGP-VEGCKLI---RKDKSSYGFIHYFDRRSAAMAILS 113
++YVGNI V+E +L+++F S G ++ K++ K +Y FI Y D A A+ +
Sbjct: 158 TLYVGNIDNSVSEDMLRDLFGSLGAQIQSIKILYDKNKRGFNYAFIEYEDHXKAENALQA 217
Query: 114 LNGRHLFGQPIKVNWAYASGQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARV 173
LNG L P+K+ WAY + Q+ + +F +FVGDLSPE+ D +L A FS +PS A V
Sbjct: 218 LNGTVLANYPLKITWAYRT-QQSRSGENFTLFVGDLSPEIDDDSLAATFSKFPSFVQANV 276
Query: 174 MWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATK 220
MWD KTGRSRG+GFVSF+N QDA++ + + G LG R IR NWA +
Sbjct: 277 MWDMKTGRSRGYGFVSFQNNQDAETVLQTMNGMSLGGRSIRLNWAVR 323
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/202 (20%), Positives = 86/202 (42%), Gaps = 42/202 (20%)
Query: 144 IFVGDLSPEVTDATLFACF-SVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAIND 202
++VG++ V++ L F S+ ++++D K R + F+ + + A++A+
Sbjct: 159 LYVGNIDNSVSEDMLRDLFGSLGAQIQSIKILYD-KNKRGFNYAFIEYEDHXKAENALQA 217
Query: 203 LTGKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQY 262
L G L + ++ WA + T + + EN
Sbjct: 218 LNGTVLANYPLKITWAYR-----------------------------TQQSRSGEN---- 244
Query: 263 TTVYVGNLAPEVTQLDLHRHFHS----LGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQ 318
T++VG+L+PE+ L F + A V+ +++ R +G+GFV + + +A +Q
Sbjct: 245 FTLFVGDLSPEIDDDSLAATFSKFPSFVQANVMWDMKTGRSRGYGFVSFQNNQDAETVLQ 304
Query: 319 MGNTTQSSYLFGKQMKCSWGSK 340
T L G+ ++ +W +
Sbjct: 305 ---TMNGMSLGGRSIRLNWAVR 323
Score = 44.7 bits (104), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 37/74 (50%), Gaps = 5/74 (6%)
Query: 265 VYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQ 324
VY+GNLA Q DL + G I ++ +KG FV Y +H AALAI N
Sbjct: 410 VYLGNLAHYTQQSDLIPLLQNFG--YIVNFKLLPEKGCAFVTYDSHERAALAIVQLNGFN 467
Query: 325 SSYLFGKQMKCSWG 338
+ G+ +KC WG
Sbjct: 468 VN---GRPLKCGWG 478
Score = 42.4 bits (98), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 50/110 (45%), Gaps = 19/110 (17%)
Query: 246 DGKETTNTEAPENNP----------QYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVR 295
+G T+ PE NP TT+YVGN+ V++ L F SLGA I+ ++
Sbjct: 130 NGGAAEQTQQPEINPASAAHGGRELSKTTLYVGNIDNSVSEDMLRDLFGSLGA-QIQSIK 188
Query: 296 VQRDK-----GFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSK 340
+ DK + F+ Y H +A A+Q N T L +K +W +
Sbjct: 189 ILYDKNKRGFNYAFIEYEDHXKAENALQALNGT---VLANYPLKITWAYR 235
Score = 42.4 bits (98), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 47/84 (55%), Gaps = 10/84 (11%)
Query: 53 PSTCRSVYVGNI--HTQVTE--PLLQEVFSSTGPVEGCKLIRKDKSSYGFIHYFDRRSAA 108
PS +VY+GN+ +TQ ++ PLLQ G + KL+ + + F+ Y AA
Sbjct: 404 PSWLCAVYLGNLAHYTQQSDLIPLLQNF----GYIVNFKLLPEKGCA--FVTYDSHERAA 457
Query: 109 MAILSLNGRHLFGQPIKVNWAYAS 132
+AI+ LNG ++ G+P+K W A+
Sbjct: 458 LAIVQLNGFNVNGRPLKCGWGKAN 481
>gi|146420743|ref|XP_001486325.1| hypothetical protein PGUG_01996 [Meyerozyma guilliermondii ATCC
6260]
Length = 397
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 106/313 (33%), Positives = 149/313 (47%), Gaps = 33/313 (10%)
Query: 59 VYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSSYGFIHYFDRRSAAMAILSLNGRH 118
+YVGNI V E L E+F T V+ K +Y F+ + R A + + NG
Sbjct: 80 LYVGNIPKTVNEQYLHELFDKTKSVKLLHDKNKPGFNYAFVEFDTREDAESVLTAFNGSE 139
Query: 119 LFGQPIKVNWAYASGQREDTSG----HFNIFVGDLSPEVTDATLFACFSVYPSCSDARVM 174
+ G IK+NWAY +S + IFVGDLS EV D TL F +PS A VM
Sbjct: 140 VGGSSIKINWAYQLSTISTSSSPELPLYTIFVGDLSAEVDDETLGKAFDQFPSRKQAHVM 199
Query: 175 WDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT------KGAGNNEDK 228
WD +T RSRG+GFVSF + +A++A+ + G ++G R IRCNWA+ K K
Sbjct: 200 WDMQTSRSRGYGFVSFADPAEAENALVTMPGLFIGGRAIRCNWASHRHMYQKKNTRPPPK 259
Query: 229 QSSDAKSVVELTNGSSEDGKETTNTEAPENNPQY---------------TTVYVGNLAPE 273
+S+ A + +++ TN PQ TTVY+GN+A
Sbjct: 260 RSASAGATTPPLPYTAQGYPIDTNNGGRNPQPQAPKSFEVVLRQAPNWQTTVYLGNIAHF 319
Query: 274 VTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAI-QMGNTTQSSYLFGKQ 332
DL + G I + + KG FV+Y +H AALAI Q+ + + G+
Sbjct: 320 THLSDLIPLLQNF--GFIVDFKFHPSKGCAFVKYDSHERAALAIVQLAGYSVN----GRP 373
Query: 333 MKCSWG-SKPTPP 344
+KC WG +P P
Sbjct: 374 LKCGWGRDRPIAP 386
>gi|448521353|ref|XP_003868484.1| Pub1 protein [Candida orthopsilosis Co 90-125]
gi|380352824|emb|CCG25580.1| Pub1 protein [Candida orthopsilosis]
Length = 426
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 79/199 (39%), Positives = 116/199 (58%), Gaps = 9/199 (4%)
Query: 41 PIPSGNLPPGFDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKS----SY 96
P+ + G ++ + +YVGN+ +E + ++FS + P++ KL+ DK+ +Y
Sbjct: 43 PVTPASATEGGRETSNKILYVGNLPKSASEEQISKLFSVSKPIKSIKLL-NDKNKLGFNY 101
Query: 97 GFIHYFDRRSAAMAILSLNGRHLFGQPIKVNWAYASGQREDTSG----HFNIFVGDLSPE 152
FI + + + A MA+ +LNG+ L IKVNWAY S S +N+FVGDLS E
Sbjct: 102 AFIEFDENQDADMALSTLNGKLLNNCEIKVNWAYQSATIASNSTPEDPTYNVFVGDLSSE 161
Query: 153 VTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQ 212
V D L F+ + S +A VMWD +T RSRG+GFV+F Q+DA+ A+ + G+WLG R
Sbjct: 162 VNDEALKKAFNKFDSFKEAHVMWDMQTSRSRGYGFVTFGKQEDAELALQTMNGEWLGGRA 221
Query: 213 IRCNWATKGAGNNEDKQSS 231
IRCNWA NN D +S
Sbjct: 222 IRCNWAAHKQSNNRDYANS 240
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 91/200 (45%), Gaps = 36/200 (18%)
Query: 144 IFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDL 203
++VG+L ++ + FSV +++ D K + F+ F QDA A++ L
Sbjct: 61 LYVGNLPKSASEEQISKLFSVSKPIKSIKLLND-KNKLGFNYAFIEFDENQDADMALSTL 119
Query: 204 TGKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYT 263
GK L + +I+ NWA +S +N + ED P Y
Sbjct: 120 NGKLLNNCEIKVNWA--------------YQSATIASNSTPED-------------PTY- 151
Query: 264 TVYVGNLAPEVTQLDLHRHFHSLG----AGVIEEVRVQRDKGFGFVRYSTHAEAALAIQM 319
V+VG+L+ EV L + F+ A V+ +++ R +G+GFV + +A LA+Q
Sbjct: 152 NVFVGDLSSEVNDEALKKAFNKFDSFKEAHVMWDMQTSRSRGYGFVTFGKQEDAELALQ- 210
Query: 320 GNTTQSSYLFGKQMKCSWGS 339
T +L G+ ++C+W +
Sbjct: 211 --TMNGEWLGGRAIRCNWAA 228
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 44/83 (53%), Gaps = 8/83 (9%)
Query: 263 TTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALA-IQMGN 321
TTVY+GN+A Q ++ + G I + + +KG FV+Y +H AALA IQ+
Sbjct: 339 TTVYLGNIAHVTQQQEMIPLLQNFG--FIVDFKFHPEKGCAFVKYDSHERAALAIIQLAG 396
Query: 322 TTQSSYLFGKQMKCSWGSKPTPP 344
L G+ +KC WG K PP
Sbjct: 397 FN----LNGRPLKCGWG-KERPP 414
Score = 39.7 bits (91), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 40/84 (47%), Gaps = 18/84 (21%)
Query: 53 PSTCRSVYVGNIH--TQVTE--PLLQE----VFSSTGPVEGCKLIRKDKSSYGFIHYFDR 104
PS +VY+GNI TQ E PLLQ V P +GC F+ Y
Sbjct: 335 PSWQTTVYLGNIAHVTQQQEMIPLLQNFGFIVDFKFHPEKGC----------AFVKYDSH 384
Query: 105 RSAAMAILSLNGRHLFGQPIKVNW 128
AA+AI+ L G +L G+P+K W
Sbjct: 385 ERAALAIIQLAGFNLNGRPLKCGW 408
>gi|297741313|emb|CBI32444.3| unnamed protein product [Vitis vinifera]
Length = 342
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 102/296 (34%), Positives = 164/296 (55%), Gaps = 21/296 (7%)
Query: 57 RSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS----YGFIHYFDRRSAAMAIL 112
++++VG++H + + L+ F TG V K+IR ++ YGF+ +F R +A +
Sbjct: 9 KTLWVGDLHQWMDDNYLRTCFGHTGEVSSIKIIRNKQTGQSEGYGFVEFFSRATAEKILH 68
Query: 113 SLNGRHL--FGQPIKVNWA-YASG-QREDTSGHFNIFVGDLSPEVTDATLFACFSV-YPS 167
S NG + QP ++NWA +++G +R D +IFVGDL+ +VTDA L F+ YPS
Sbjct: 69 SYNGTLMPNTEQPFRLNWATFSTGDRRTDAGSDLSIFVGDLASDVTDALLQETFATRYPS 128
Query: 168 CSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT-KGAGNNE 226
A+V+ D TGRS+G+GFV F ++ + A+N++ G + SR +R AT K A +
Sbjct: 129 VKGAKVVTDSNTGRSKGYGFVRFGDENERSRAMNEMNGIYCSSRPMRIGVATPKKASGYQ 188
Query: 227 DKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSL 286
+ SS A + L G++ +G ++A ++ TT++VG L EVT DL + F
Sbjct: 189 QQYSSQA---LVLAGGNASNGAVAQGSQANGDSTN-TTIFVGGLDSEVTDEDLRQSFSQF 244
Query: 287 GAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQ-MKCSWGSKP 341
G + V++ KG GFV+++ A A+Q N T + GKQ ++ SWG P
Sbjct: 245 GE--VVSVKIPVGKGCGFVQFANRNSAEDALQRLNGT----VIGKQTVRLSWGRNP 294
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 89/201 (44%), Gaps = 40/201 (19%)
Query: 52 DPSTCRSVYVGNIHTQVTEPLLQEVFSSTGP-VEGCKLIRKDKS----SYGFIHYFDRRS 106
D + S++VG++ + VT+ LLQE F++ P V+G K++ + YGF+ + D
Sbjct: 97 DAGSDLSIFVGDLASDVTDALLQETFATRYPSVKGAKVVTDSNTGRSKGYGFVRFGDENE 156
Query: 107 AAMAILSLNGRHLFGQPIKV----------------------------NWAYASG-QRED 137
+ A+ +NG + +P+++ N A A G Q
Sbjct: 157 RSRAMNEMNGIYCSSRPMRIGVATPKKASGYQQQYSSQALVLAGGNASNGAVAQGSQANG 216
Query: 138 TSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQ 197
S + IFVG L EVTD L FS + ++ +G GFV F N+ A+
Sbjct: 217 DSTNTTIFVGGLDSEVTDEDLRQSFSQFGEVVSVKIP------VGKGCGFVQFANRNSAE 270
Query: 198 SAINDLTGKWLGSRQIRCNWA 218
A+ L G +G + +R +W
Sbjct: 271 DALQRLNGTVIGKQTVRLSWG 291
>gi|354545437|emb|CCE42165.1| hypothetical protein CPAR2_807140 [Candida parapsilosis]
Length = 420
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 78/195 (40%), Positives = 114/195 (58%), Gaps = 9/195 (4%)
Query: 41 PIPSGNLPPGFDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKS----SY 96
P+ + G ++ + +YVGN+ +E + E+FS + P++ KL+ DK+ +Y
Sbjct: 38 PVTPASATEGGRETSNKILYVGNLPKSASEEQISELFSVSKPIKSIKLL-NDKNKLGFNY 96
Query: 97 GFIHYFDRRSAAMAILSLNGRHLFGQPIKVNWAYASGQREDTSG----HFNIFVGDLSPE 152
FI + D + A MA+ +LNG+ L I+VNWAY S +S +N+FVGDLS E
Sbjct: 97 AFIEFDDNQEADMALSTLNGKLLNNCEIRVNWAYQSATIASSSTPEDPTYNLFVGDLSSE 156
Query: 153 VTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQ 212
V D L F+ + S +A VMWD +T RSRG+GFV+F Q+DA+ A+ + G WLG R
Sbjct: 157 VNDEALKKAFNKFDSFKEAHVMWDMQTSRSRGYGFVTFSKQEDAELALQTMNGAWLGGRA 216
Query: 213 IRCNWATKGAGNNED 227
IRCNWA NN +
Sbjct: 217 IRCNWAAHKQVNNRN 231
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 94/200 (47%), Gaps = 36/200 (18%)
Query: 144 IFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDL 203
++VG+L ++ + FSV +++ D K + F+ F + Q+A A++ L
Sbjct: 56 LYVGNLPKSASEEQISELFSVSKPIKSIKLLND-KNKLGFNYAFIEFDDNQEADMALSTL 114
Query: 204 TGKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYT 263
GK L + +IR NWA + A ++ PE+ P Y
Sbjct: 115 NGKLLNNCEIRVNWAYQSA--------------------------TIASSSTPED-PTYN 147
Query: 264 TVYVGNLAPEVTQLDLHRHFHSLG----AGVIEEVRVQRDKGFGFVRYSTHAEAALAIQM 319
++VG+L+ EV L + F+ A V+ +++ R +G+GFV +S +A LA+Q
Sbjct: 148 -LFVGDLSSEVNDEALKKAFNKFDSFKEAHVMWDMQTSRSRGYGFVTFSKQEDAELALQ- 205
Query: 320 GNTTQSSYLFGKQMKCSWGS 339
T ++L G+ ++C+W +
Sbjct: 206 --TMNGAWLGGRAIRCNWAA 223
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 44/83 (53%), Gaps = 8/83 (9%)
Query: 263 TTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALA-IQMGN 321
TTVY+GN+A Q ++ + G I + + +KG FV+Y +H AALA IQ+
Sbjct: 332 TTVYLGNIAHATQQQEMLPLLQNFG--FIVDFKFHPEKGCAFVKYDSHERAALAIIQLAG 389
Query: 322 TTQSSYLFGKQMKCSWGSKPTPP 344
L G+ +KC WG K PP
Sbjct: 390 FN----LNGRPLKCGWG-KERPP 407
Score = 39.7 bits (91), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 40/84 (47%), Gaps = 18/84 (21%)
Query: 53 PSTCRSVYVGNIH--TQVTE--PLLQE----VFSSTGPVEGCKLIRKDKSSYGFIHYFDR 104
PS +VY+GNI TQ E PLLQ V P +GC F+ Y
Sbjct: 328 PSWQTTVYLGNIAHATQQQEMLPLLQNFGFIVDFKFHPEKGC----------AFVKYDSH 377
Query: 105 RSAAMAILSLNGRHLFGQPIKVNW 128
AA+AI+ L G +L G+P+K W
Sbjct: 378 ERAALAIIQLAGFNLNGRPLKCGW 401
>gi|324497903|gb|ADY39600.1| putative TIA1 protein [Hottentotta judaicus]
Length = 196
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 82/192 (42%), Positives = 124/192 (64%), Gaps = 5/192 (2%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRK-DKSSYGFIHYFDRRSAAMAILSLNG 116
++YVGN+ VTE L+ +F+ GPV GCK+I + Y F+ + D ++AA A+L++N
Sbjct: 1 TLYVGNLDPSVTEELILALFTQIGPVIGCKIIHEPGNDPYCFVEFTDHQAAAAALLAMNK 60
Query: 117 RHLFGQPIKVNWAYASGQ--REDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVM 174
R G+ +KVNWA + G ++DTS H++IFVGDLSPE+ L F+ + SD RV+
Sbjct: 61 RQCLGKEMKVNWATSPGNTPKQDTSKHYHIFVGDLSPEIETQQLKEAFAPFGEISDCRVV 120
Query: 175 WDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSSDAK 234
D +T +S+G+GFVSF + DA++AI + G+WLGSR IR NWAT+ + + ++AK
Sbjct: 121 RDPQTLKSKGYGFVSFVKKTDAENAIATMNGQWLGSRAIRTNWATRKPPASRSQNETNAK 180
Query: 235 SVV--ELTNGSS 244
+ E+ N SS
Sbjct: 181 PLTFDEVYNQSS 192
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 91/214 (42%), Gaps = 48/214 (22%)
Query: 144 IFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDL 203
++VG+L P VT+ + A F+ +++ + + + FV F + Q A +A+ +
Sbjct: 2 LYVGNLDPSVTEELILALFTQIGPVIGCKIIHEPG---NDPYCFVEFTDHQAAAAALLAM 58
Query: 204 TGKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYT 263
+ ++++ NWAT GN + +S ++
Sbjct: 59 NKRQCLGKEMKVNWAT-SPGNTPKQDTS-----------------------------KHY 88
Query: 264 TVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRD------KGFGFVRY--STHAEAAL 315
++VG+L+PE+ L F G I + RV RD KG+GFV + T AE A+
Sbjct: 89 HIFVGDLSPEIETQQLKEAFAPFGE--ISDCRVVRDPQTLKSKGYGFVSFVKKTDAENAI 146
Query: 316 AIQMGNTTQSSYLFGKQMKCSWGSKPTPPGTSSN 349
A G +L + ++ +W ++ P S N
Sbjct: 147 ATMNG-----QWLGSRAIRTNWATRKPPASRSQN 175
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 46/85 (54%), Gaps = 4/85 (4%)
Query: 49 PGFDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKS----SYGFIHYFDR 104
P D S ++VG++ ++ L+E F+ G + C+++R ++ YGF+ + +
Sbjct: 80 PKQDTSKHYHIFVGDLSPEIETQQLKEAFAPFGEISDCRVVRDPQTLKSKGYGFVSFVKK 139
Query: 105 RSAAMAILSLNGRHLFGQPIKVNWA 129
A AI ++NG+ L + I+ NWA
Sbjct: 140 TDAENAIATMNGQWLGSRAIRTNWA 164
>gi|156845624|ref|XP_001645702.1| hypothetical protein Kpol_1043p34 [Vanderwaltozyma polyspora DSM
70294]
gi|156116369|gb|EDO17844.1| hypothetical protein Kpol_1043p34 [Vanderwaltozyma polyspora DSM
70294]
Length = 442
Score = 152 bits (383), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 68/169 (40%), Positives = 107/169 (63%), Gaps = 2/169 (1%)
Query: 54 STCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLI--RKDKSSYGFIHYFDRRSAAMAI 111
++ + +YVGN+ + E +L++ F GP+ K+I + ++++Y F+ Y A++A+
Sbjct: 74 TSDKILYVGNLDKSINEDILKQYFQVGGPITNVKVINDKNNEANYAFVEYSQHHDASIAL 133
Query: 112 LSLNGRHLFGQPIKVNWAYASGQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDA 171
+LNG+ + +K+NWA+ S Q + FN+F+GDL+ +V D TL A F + S A
Sbjct: 134 KTLNGKQIENNTLKINWAFQSQQNTTSDETFNLFIGDLNVDVDDETLVAAFKDFKSFIQA 193
Query: 172 RVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATK 220
VMWD +TGRSRG+GFVSF N DAQ A++ + G L RQ+R NWA+K
Sbjct: 194 HVMWDMQTGRSRGYGFVSFSNLDDAQVAMDTMQGSELNGRQLRINWASK 242
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 92/201 (45%), Gaps = 41/201 (20%)
Query: 144 IFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDL 203
++VG+L + + L F V ++ +V+ D+ + FV + DA A+ L
Sbjct: 79 LYVGNLDKSINEDILKQYFQVGGPITNVKVINDKNN--EANYAFVEYSQHHDASIALKTL 136
Query: 204 TGKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYT 263
GK + + ++ NWA + N +SD ET N
Sbjct: 137 NGKQIENNTLKINWAFQSQQNT----TSD----------------ETFN----------- 165
Query: 264 TVYVGNLAPEV---TQLDLHRHFHS-LGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQM 319
+++G+L +V T + + F S + A V+ +++ R +G+GFV +S +A +A+
Sbjct: 166 -LFIGDLNVDVDDETLVAAFKDFKSFIQAHVMWDMQTGRSRGYGFVSFSNLDDAQVAM-- 222
Query: 320 GNTTQSSYLFGKQMKCSWGSK 340
+T Q S L G+Q++ +W SK
Sbjct: 223 -DTMQGSELNGRQLRINWASK 242
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 50/99 (50%), Gaps = 12/99 (12%)
Query: 261 QYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMG 320
+ TTVY+GN+ T+ DL + G I + + +KG F++Y TH +AA+ I
Sbjct: 322 RVTTVYIGNIPHFATEADLIPLLQNFG--FILDFKHYPEKGNCFIKYDTHEQAAVCI--- 376
Query: 321 NTTQSSYLF-GKQMKCSWGSK-----PTPPGTSSNPLPP 353
+++ F G+ +K WG + P PP + +PP
Sbjct: 377 -VVLANFPFQGRNLKTGWGKEKSTFMPMPPQDPNGQMPP 414
>gi|126133234|ref|XP_001383142.1| hypothetical protein PICST_55837 [Scheffersomyces stipitis CBS
6054]
gi|126094967|gb|ABN65113.1| polyadenylated RNA-binding protein, partial [Scheffersomyces
stipitis CBS 6054]
Length = 453
Score = 151 bits (382), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 75/172 (43%), Positives = 110/172 (63%), Gaps = 11/172 (6%)
Query: 57 RSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKS----SYGFIHYFDRRSAAMAIL 112
+ +YVG +H VT+ +L+++FS G ++ K++ DK+ +Y FI + ++A MA+
Sbjct: 79 KILYVGGLHKSVTDDMLKDLFSVAGGIKSVKIL-NDKNKPGFNYAFIEFDTNQAADMALH 137
Query: 113 SLNGRHLFGQPIKVNWAYASGQREDTSGH-----FNIFVGDLSPEVTDATLFACFSVYPS 167
+LNGR + IK+NWA+ S +T+ H FNIFVGDLSPEV D TL FS + +
Sbjct: 138 TLNGRIINNSEIKINWAFQSSTI-NTAAHPDEPTFNIFVGDLSPEVDDETLTRAFSKFQT 196
Query: 168 CSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT 219
A VMWD +T RSRG+GFV+F Q DA+ A+ + G+W+ R IRCNWA+
Sbjct: 197 LKQAHVMWDMQTSRSRGYGFVTFGTQADAELALQTMNGEWINGRAIRCNWAS 248
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 92/200 (46%), Gaps = 36/200 (18%)
Query: 144 IFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDL 203
++VG L VTD L FSV +++ D K + F+ F Q A A++ L
Sbjct: 81 LYVGGLHKSVTDDMLKDLFSVAGGIKSVKILND-KNKPGFNYAFIEFDTNQAADMALHTL 139
Query: 204 TGKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYT 263
G+ + + +I+ NWA + + T NT A + P +
Sbjct: 140 NGRIINNSEIKINWAFQSS---------------------------TINTAAHPDEPTFN 172
Query: 264 TVYVGNLAPEVTQLDLHRHFHSLG----AGVIEEVRVQRDKGFGFVRYSTHAEAALAIQM 319
++VG+L+PEV L R F A V+ +++ R +G+GFV + T A+A LA+Q
Sbjct: 173 -IFVGDLSPEVDDETLTRAFSKFQTLKQAHVMWDMQTSRSRGYGFVTFGTQADAELALQ- 230
Query: 320 GNTTQSSYLFGKQMKCSWGS 339
T ++ G+ ++C+W S
Sbjct: 231 --TMNGEWINGRAIRCNWAS 248
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 49/96 (51%), Gaps = 10/96 (10%)
Query: 263 TTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAI-QMGN 321
TTVY+GN+A Q +L + G I + + ++G FV+Y +H AALAI Q+
Sbjct: 356 TTVYLGNIAHFTQQNELIPLLQNFG--FIVDFKFHPERGCAFVKYDSHERAALAIVQLAG 413
Query: 322 TTQSSYLFGKQMKCSWGSKPTPPGTSSN---PLPPP 354
T + G+ +KC WG P G N +PPP
Sbjct: 414 FT----VNGRPLKCGWGKDRPPMGQFQNFGRGVPPP 445
>gi|313226301|emb|CBY21445.1| unnamed protein product [Oikopleura dioica]
Length = 471
Score = 151 bits (381), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 103/287 (35%), Positives = 147/287 (51%), Gaps = 32/287 (11%)
Query: 57 RSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRK---DKSSYGFIHYFDRRSAAMAILS 113
R++YVGN+H TE +L+ +F+ G V K+I S Y FI Y A A+ +
Sbjct: 47 RTLYVGNLHKNATENVLKALFAVIGNVVDIKMINDAALSTSHYCFITYETHVGAQRALAA 106
Query: 114 LNGRHLFGQPIKVNWAYA-SGQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDAR 172
+NGR ++ P+KVNWA G ++DTS +IFVGDL+ E+T L F + S+AR
Sbjct: 107 MNGRDVYKMPLKVNWATRPDGIKKDTSKDHHIFVGDLAQELTTLDLQNEFEKFGKISEAR 166
Query: 173 VMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSSD 232
V+ D +T RS+G+GFV+F ++ A+ AI ++ K + R++R NWAT
Sbjct: 167 VVRDAQTNRSKGYGFVAFLKKESAEMAITEMNNKSICGREVRTNWATSR----------- 215
Query: 233 AKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEV-TQLDLHRHFHSLGAGVI 291
+L + D + + N TTVYVG + +V TQ L F GV+
Sbjct: 216 -----KLPPPTVIDPHKVAQASSFSN----TTVYVGGITKDVHTQQVLQASFSRF--GVV 264
Query: 292 EEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWG 338
EEVR + FGFV+ TH A AI N S G +KC WG
Sbjct: 265 EEVRT--FETFGFVKMQTHQAATNAICEMNGASIS---GCTVKCRWG 306
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 90/198 (45%), Gaps = 30/198 (15%)
Query: 52 DPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS----YGFIHYFDRRSA 107
D S ++VG++ ++T LQ F G + +++R +++ YGF+ + + SA
Sbjct: 131 DTSKDHHIFVGDLAQELTTLDLQNEFEKFGKISEARVVRDAQTNRSKGYGFVAFLKKESA 190
Query: 108 AMAILSLNGRHLFGQPIKVNWAYASG------------QREDTSGHFNIFVGDLSPEV-T 154
MAI +N + + G+ ++ NWA + + + + ++VG ++ +V T
Sbjct: 191 EMAITEMNNKSICGREVRTNWATSRKLPPPTVIDPHKVAQASSFSNTTVYVGGITKDVHT 250
Query: 155 DATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIR 214
L A FS + + R FGFV + Q A +AI ++ G + ++
Sbjct: 251 QQVLQASFSRFGVVEEVRTF--------ETFGFVKMQTHQAATNAICEMNGASISGCTVK 302
Query: 215 CNWATKGAGNNEDKQSSD 232
C W G ++ K S+D
Sbjct: 303 CRW-----GKDDHKSSND 315
>gi|255726450|ref|XP_002548151.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
gi|240134075|gb|EER33630.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
Length = 472
Score = 151 bits (381), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 79/169 (46%), Positives = 106/169 (62%), Gaps = 8/169 (4%)
Query: 59 VYVGNIHTQVTEPLLQEVFSSTG-PVEGCKLIR-KDKS--SYGFIHYFDRRSAAMAILSL 114
+YVGN+ +E +++++FS G P++ KL+ K+K+ +Y FI Y +A MA+ +L
Sbjct: 84 LYVGNLPKSASEEMVKDLFSVGGNPIKTIKLLNDKNKAGFNYAFIEYDSNDTADMALNTL 143
Query: 115 NGRHLFGQPIKVNWAYASGQREDTSGH----FNIFVGDLSPEVTDATLFACFSVYPSCSD 170
NGR + IKVNWAY S T FNIFVGDLSPEV D L FS + S
Sbjct: 144 NGRVIDESEIKVNWAYQSAAIASTLNSEEPLFNIFVGDLSPEVNDEGLRNAFSKFGSLKQ 203
Query: 171 ARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT 219
A VMWD +T RSRG+GFV+F Q DA+ A+ + G+WLG R IRCNWA+
Sbjct: 204 AHVMWDMQTSRSRGYGFVTFSEQADAELALQTMNGEWLGGRAIRCNWAS 252
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 89/200 (44%), Gaps = 35/200 (17%)
Query: 144 IFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDL 203
++VG+L ++ + FSV + + + K + F+ + + A A+N L
Sbjct: 84 LYVGNLPKSASEEMVKDLFSVGGNPIKTIKLLNDKNKAGFNYAFIEYDSNDTADMALNTL 143
Query: 204 TGKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYT 263
G+ + +I+ NWA + A T N+E P N
Sbjct: 144 NGRVIDESEIKVNWAYQSAA-----------------------IASTLNSEEPLFN---- 176
Query: 264 TVYVGNLAPEVTQLDLHRHFHSLG----AGVIEEVRVQRDKGFGFVRYSTHAEAALAIQM 319
++VG+L+PEV L F G A V+ +++ R +G+GFV +S A+A LA+Q
Sbjct: 177 -IFVGDLSPEVNDEGLRNAFSKFGSLKQAHVMWDMQTSRSRGYGFVTFSEQADAELALQ- 234
Query: 320 GNTTQSSYLFGKQMKCSWGS 339
T +L G+ ++C+W S
Sbjct: 235 --TMNGEWLGGRAIRCNWAS 252
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 44/83 (53%), Gaps = 8/83 (9%)
Query: 263 TTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALA-IQMGN 321
TTVY+GN+A Q ++ + G I + + ++G FV+Y TH AALA IQ+
Sbjct: 376 TTVYLGNIAHFTQQQEIIPLLQNFG--FIVDFKFHPERGCAFVKYDTHERAALAIIQLAG 433
Query: 322 TTQSSYLFGKQMKCSWGSKPTPP 344
L G+ +KC WG K PP
Sbjct: 434 FN----LNGRPLKCGWG-KERPP 451
Score = 39.7 bits (91), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 42/95 (44%), Gaps = 24/95 (25%)
Query: 48 PPGFD------PSTCRSVYVGNI--HTQVTE--PLLQE----VFSSTGPVEGCKLIRKDK 93
P FD PS +VY+GNI TQ E PLLQ V P GC
Sbjct: 361 PQSFDIVLRQTPSWQTTVYLGNIAHFTQQQEIIPLLQNFGFIVDFKFHPERGC------- 413
Query: 94 SSYGFIHYFDRRSAAMAILSLNGRHLFGQPIKVNW 128
F+ Y AA+AI+ L G +L G+P+K W
Sbjct: 414 ---AFVKYDTHERAALAIIQLAGFNLNGRPLKCGW 445
>gi|307108302|gb|EFN56542.1| hypothetical protein CHLNCDRAFT_144188, partial [Chlorella
variabilis]
Length = 330
Score = 150 bits (380), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 73/149 (48%), Positives = 101/149 (67%), Gaps = 6/149 (4%)
Query: 57 RSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS-----YGFIHYFDRRSAAMAI 111
+++Y+GN+H VTE LQEVF+ G + K+I KDK++ YGF + D SA A+
Sbjct: 182 KTLYLGNLHPFVTEQTLQEVFAGLGGITELKVI-KDKATGVSAGYGFAKFTDSSSAQAAL 240
Query: 112 LSLNGRHLFGQPIKVNWAYASGQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDA 171
+ LFGQ ++NWA+ Q+E+ + HF+ FVGDLS +VTDA L F P CSDA
Sbjct: 241 DKVAKTVLFGQEARINWAFQKEQKEEVATHFHAFVGDLSSDVTDAMLHGAFQNCPGCSDA 300
Query: 172 RVMWDQKTGRSRGFGFVSFRNQQDAQSAI 200
RVMWD TGRSRG+GFVSFR++++A++AI
Sbjct: 301 RVMWDHATGRSRGYGFVSFRHREEAEAAI 329
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 83/183 (45%), Gaps = 36/183 (19%)
Query: 140 GHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSA 199
G+ +++G+L P VT+ TL F+ ++ +V+ D+ TG S G+GF F + AQ+A
Sbjct: 180 GNKTLYLGNLHPFVTEQTLQEVFAGLGGITELKVIKDKATGVSAGYGFAKFTDSSSAQAA 239
Query: 200 INDLTGKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENN 259
++ + L ++ R NWA + ++ KE T
Sbjct: 240 LDKVAKTVLFGQEARINWAFQ------------------------KEQKEEVAT------ 269
Query: 260 PQYTTVYVGNLAPEVTQLDLHRHFHSL----GAGVIEEVRVQRDKGFGFVRYSTHAEAAL 315
+ +VG+L+ +VT LH F + A V+ + R +G+GFV + EA
Sbjct: 270 --HFHAFVGDLSSDVTDAMLHGAFQNCPGCSDARVMWDHATGRSRGYGFVSFRHREEAEA 327
Query: 316 AIQ 318
AIQ
Sbjct: 328 AIQ 330
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 46/82 (56%), Gaps = 15/82 (18%)
Query: 264 TVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDK------GFGFVRY--STHAEAAL 315
T+Y+GNL P VT+ L F LG I E++V +DK G+GF ++ S+ A+AAL
Sbjct: 183 TLYLGNLHPFVTEQTLQEVFAGLGG--ITELKVIKDKATGVSAGYGFAKFTDSSSAQAAL 240
Query: 316 AIQMGNTTQSSYLFGKQMKCSW 337
+ + LFG++ + +W
Sbjct: 241 -----DKVAKTVLFGQEARINW 257
>gi|324507975|gb|ADY43373.1| Nucleolysin TIAR [Ascaris suum]
Length = 290
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 86/230 (37%), Positives = 125/230 (54%), Gaps = 22/230 (9%)
Query: 114 LNGRHLFGQPIKVNWAYASGQ--REDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDA 171
+N R L + +KVNWA G + DTS HF++F+GDLSPEV + L F+ + SDA
Sbjct: 1 MNKRVLLDREMKVNWATEPGSQAKVDTSKHFHVFIGDLSPEVDNKALKDAFAPFGEVSDA 60
Query: 172 RVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSS 231
+V+ D T +S+G+GFVS+ +++A+ AI + G+WLG R IR NWAT+ + +QS
Sbjct: 61 KVIRDSTTLKSKGYGFVSYPKREEAERAIEQMNGQWLGRRTIRTNWATRKPTGTDGQQSK 120
Query: 232 DAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVI 291
S ++ N + P T+VY+GN+ V DL F G I
Sbjct: 121 PELSYDDVFN---------------QTGPDNTSVYIGNVNQSVNDEDLRAAFDKFGR--I 163
Query: 292 EEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSKP 341
EVR+ + +GF FVR+ A AI N T+ + G+ +KCSWG P
Sbjct: 164 VEVRIFKTQGFAFVRFDKKDSACNAIVKMNGTE---IGGQTVKCSWGRTP 210
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 92/201 (45%), Gaps = 27/201 (13%)
Query: 52 DPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKS----SYGFIHYFDRRSA 107
D S V++G++ +V L++ F+ G V K+IR + YGF+ Y R A
Sbjct: 26 DTSKHFHVFIGDLSPEVDNKALKDAFAPFGEVSDAKVIRDSTTLKSKGYGFVSYPKREEA 85
Query: 108 AMAILSLNGRHLFGQPIKVNWAY-----ASGQREDTSGHFN------------IFVGDLS 150
AI +NG+ L + I+ NWA GQ+ ++ +++G+++
Sbjct: 86 ERAIEQMNGQWLGRRTIRTNWATRKPTGTDGQQSKPELSYDDVFNQTGPDNTSVYIGNVN 145
Query: 151 PEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGS 210
V D L A F + + R+ +++GF FV F + A +AI + G +G
Sbjct: 146 QSVNDEDLRAAFDKFGRIVEVRIF------KTQGFAFVRFDKKDSACNAIVKMNGTEIGG 199
Query: 211 RQIRCNWATKGAGNNEDKQSS 231
+ ++C+W G+N + ++
Sbjct: 200 QTVKCSWGRTPEGHNNQQNAA 220
>gi|366990603|ref|XP_003675069.1| hypothetical protein NCAS_0B06140 [Naumovozyma castellii CBS 4309]
gi|342300933|emb|CCC68698.1| hypothetical protein NCAS_0B06140 [Naumovozyma castellii CBS 4309]
Length = 443
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 70/170 (41%), Positives = 105/170 (61%), Gaps = 3/170 (1%)
Query: 54 STCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS---YGFIHYFDRRSAAMA 110
++ R +YVGN+ + E LL++ F G + K++ K++ Y FI Y A +A
Sbjct: 80 TSDRVLYVGNLDKSINEDLLKQYFQVGGQITDVKIMVDKKNNNVNYAFIEYLKSHDANVA 139
Query: 111 ILSLNGRHLFGQPIKVNWAYASGQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSD 170
+ +LNG + G+ +++NWA+ S Q ++ FN+FVGDL+ +V D TL F +PS
Sbjct: 140 LQTLNGIQIEGKTVRINWAFQSQQTTNSDDTFNLFVGDLNVDVDDETLSHAFDQFPSYVQ 199
Query: 171 ARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATK 220
A VMWD +TGRSRG+GFVSF +Q+ AQ A+N + G + R +R NWATK
Sbjct: 200 AHVMWDMQTGRSRGYGFVSFADQEQAQEAMNVMQGMPINGRAVRINWATK 249
>gi|149240785|ref|XP_001526223.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
gi|146450346|gb|EDK44602.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
Length = 601
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 76/172 (44%), Positives = 106/172 (61%), Gaps = 10/172 (5%)
Query: 57 RSVYVGNIHTQVTEPLLQEVFSS-TGPVEGCKLIRKDKS----SYGFIHYFDRRSAAMAI 111
+ +YVGN+ +E + E+FSS + P++ KL+ DK+ +Y FI + + A A+
Sbjct: 100 KILYVGNLAKSASEEQINEIFSSVSNPIKSIKLLN-DKNKLGFNYAFIEFNESEDAEKAL 158
Query: 112 LSLNGRHLFGQPIKVNWAYAS----GQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPS 167
SLNG+ + G IKVNWAY S G +NIFVGDLS EV D L F+ + S
Sbjct: 159 NSLNGKDVNGSDIKVNWAYQSAAIAGGSTPEEPSYNIFVGDLSSEVNDEALKKAFTKFGS 218
Query: 168 CSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT 219
A VMWD +T RSRG+GFV+F Q+DA++A+ + G+WLG R IRCNWA+
Sbjct: 219 LKQAHVMWDMQTSRSRGYGFVTFGKQEDAENALQSMNGEWLGGRAIRCNWAS 270
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 90/200 (45%), Gaps = 35/200 (17%)
Query: 144 IFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDL 203
++VG+L+ ++ + FS + + + + K + F+ F +DA+ A+N L
Sbjct: 102 LYVGNLAKSASEEQINEIFSSVSNPIKSIKLLNDKNKLGFNYAFIEFNESEDAEKALNSL 161
Query: 204 TGKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYT 263
GK + I+ NWA + A + GS+ PE P Y
Sbjct: 162 NGKDVNGSDIKVNWAYQSAA---------------IAGGST-----------PEE-PSYN 194
Query: 264 TVYVGNLAPEVTQLDLHRHFHSLG----AGVIEEVRVQRDKGFGFVRYSTHAEAALAIQM 319
++VG+L+ EV L + F G A V+ +++ R +G+GFV + +A A+Q
Sbjct: 195 -IFVGDLSSEVNDEALKKAFTKFGSLKQAHVMWDMQTSRSRGYGFVTFGKQEDAENALQS 253
Query: 320 GNTTQSSYLFGKQMKCSWGS 339
N +L G+ ++C+W S
Sbjct: 254 MN---GEWLGGRAIRCNWAS 270
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 44/80 (55%), Gaps = 9/80 (11%)
Query: 263 TTVYVGNLAPEVTQLDLHRHFHSLGA-GVIEEVRVQRDKGFGFVRYSTHAEAALA-IQMG 320
TTVY+GN+A TQL H L + G I + + ++G FV+Y +H AALA IQ+
Sbjct: 504 TTVYIGNIA-HFTQL--HEMIPLLQSFGFIVDFKFHPERGCAFVKYDSHERAALAIIQLA 560
Query: 321 NTTQSSYLFGKQMKCSWGSK 340
L G+ +KC WG +
Sbjct: 561 GFN----LNGRPLKCGWGKE 576
Score = 41.2 bits (95), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 40/84 (47%), Gaps = 18/84 (21%)
Query: 53 PSTCRSVYVGNI--HTQVTE--PLLQE----VFSSTGPVEGCKLIRKDKSSYGFIHYFDR 104
PS +VY+GNI TQ+ E PLLQ V P GC F+ Y
Sbjct: 500 PSWQTTVYIGNIAHFTQLHEMIPLLQSFGFIVDFKFHPERGC----------AFVKYDSH 549
Query: 105 RSAAMAILSLNGRHLFGQPIKVNW 128
AA+AI+ L G +L G+P+K W
Sbjct: 550 ERAALAIIQLAGFNLNGRPLKCGW 573
>gi|241953527|ref|XP_002419485.1| poly uridylate-binding protein, putative; poly(A)+ RNA-binding
protein, putative [Candida dubliniensis CD36]
gi|223642825|emb|CAX43080.1| poly uridylate-binding protein, putative [Candida dubliniensis
CD36]
Length = 497
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 81/172 (47%), Positives = 109/172 (63%), Gaps = 9/172 (5%)
Query: 57 RSVYVGNIHTQVTEPLLQEVFSSTG-PVEGCKLIR-KDKS--SYGFIHYFDRRSAAMAIL 112
+ +YVGN+ +E ++QE+FS G PV+ K++ K+K+ +Y FI Y +A MA+
Sbjct: 70 KILYVGNLPKSASEEMIQELFSVDGNPVKTIKVLNDKNKAGFNYAFIEYDTNEAADMALN 129
Query: 113 SLNGRHLFGQPIKVNWAYAS----GQREDTSG-HFNIFVGDLSPEVTDATLFACFSVYPS 167
+LNGR + IKVNWA+ S G +T FNIFVGDLSPEV D L FS + S
Sbjct: 130 TLNGRLVDNVEIKVNWAFQSAAIAGNPNNTEEPLFNIFVGDLSPEVNDEGLRNAFSKFES 189
Query: 168 CSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT 219
A VMWD +T RSRG+GFV+F NQ DA+ A+ + G+WL R IRCNWA+
Sbjct: 190 LKQAHVMWDMQTSRSRGYGFVTFGNQSDAELALQTMNGEWLCGRAIRCNWAS 241
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 88/200 (44%), Gaps = 34/200 (17%)
Query: 144 IFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDL 203
++VG+L ++ + FSV + + + K + F+ + + A A+N L
Sbjct: 72 LYVGNLPKSASEEMIQELFSVDGNPVKTIKVLNDKNKAGFNYAFIEYDTNEAADMALNTL 131
Query: 204 TGKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYT 263
G+ + + +I+ NWA + S+ NTE P N
Sbjct: 132 NGRLVDNVEIKVNWAFQ----------------------SAAIAGNPNNTEEPLFN---- 165
Query: 264 TVYVGNLAPEVTQLDLHRHFHSLG----AGVIEEVRVQRDKGFGFVRYSTHAEAALAIQM 319
++VG+L+PEV L F A V+ +++ R +G+GFV + ++A LA+Q
Sbjct: 166 -IFVGDLSPEVNDEGLRNAFSKFESLKQAHVMWDMQTSRSRGYGFVTFGNQSDAELALQ- 223
Query: 320 GNTTQSSYLFGKQMKCSWGS 339
T +L G+ ++C+W S
Sbjct: 224 --TMNGEWLCGRAIRCNWAS 241
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 44/83 (53%), Gaps = 8/83 (9%)
Query: 263 TTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALA-IQMGN 321
TTVY+GN+A Q +L + G I + + ++G FV+Y TH AALA IQ+
Sbjct: 399 TTVYLGNIAHFTQQQELIPLLQNFG--FIVDFKFHPERGCAFVKYDTHERAALAIIQLAG 456
Query: 322 TTQSSYLFGKQMKCSWGSKPTPP 344
L G+ +KC WG K PP
Sbjct: 457 FN----LNGRPLKCGWG-KERPP 474
Score = 42.4 bits (98), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 51/90 (56%), Gaps = 6/90 (6%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS----YGFIHYFDRRSAAMAILS 113
+++VG++ +V + L+ FS ++ ++ ++S YGF+ + ++ A +A+ +
Sbjct: 165 NIFVGDLSPEVNDEGLRNAFSKFESLKQAHVMWDMQTSRSRGYGFVTFGNQSDAELALQT 224
Query: 114 LNGRHLFGQPIKVNWAYASGQREDTSGHFN 143
+NG L G+ I+ NW AS +++ H+N
Sbjct: 225 MNGEWLCGRAIRCNW--ASHKQQQQQQHYN 252
>gi|343427062|emb|CBQ70590.1| related to PUB1-major polyadenylated RNA-binding protein of nucleus
and cytoplasm [Sporisorium reilianum SRZ2]
Length = 404
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 103/342 (30%), Positives = 157/342 (45%), Gaps = 67/342 (19%)
Query: 59 VYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKS---SYGFIHYFDRRSAAMAILSLN 115
V+V N+ TE +E+F + G V+ K++ + +YGF+ Y D SA A+ +++
Sbjct: 7 VHVANLPATTTE---RELFGALGAVQTAKVVSTRAAGGLAYGFVEYGDVASAERAVRTMD 63
Query: 116 GRHLFGQPIKVNWAYASGQREDTSG----------------HFNIFVGDLSPEVTDATLF 159
G PIKV WA S + + ++FVGDL+P+V DA +
Sbjct: 64 AWLWLGTPIKVCWARHSMHPDAVEAAEAERAGGMRGGAAAGNSHLFVGDLAPDVDDAVVH 123
Query: 160 ACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT 219
A FS + S +D RVM+D +TG+SRGFGF+S R++ +A+ I G+WLG RQIR NWA+
Sbjct: 124 AFFSRFASLADVRVMYDPETGKSRGFGFISLRSKSEAEECIAVTQGRWLGGRQIRVNWAS 183
Query: 220 K-------------GAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEA----------- 255
+ G S + G + T +T +
Sbjct: 184 QKNQGQAAAAVPPAATGMVSSASPHPDPSYTQRQTGYTSPSTPTFDTPSTTPLLPRRHTT 243
Query: 256 -------PENNPQY-----------TTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQ 297
P + P Y T+VYVGN++P T DL R F G E R+
Sbjct: 244 LASAPRLPASTPTYDQILASAPSTQTSVYVGNISPHTTPQDLVRIFAPFNHGQRVEARIP 303
Query: 298 RD--KGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSW 337
+G+GFV ++HA+AA AI + Q +L + ++ W
Sbjct: 304 PPPGRGYGFVTLTSHAQAASAI-CALSMQGVFLHSRWLRFGW 344
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/204 (22%), Positives = 87/204 (42%), Gaps = 33/204 (16%)
Query: 144 IFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDL 203
+ V +L T+ LF + A+V+ + G +GFV + + A+ A+ +
Sbjct: 7 VHVANLPATTTERELFGALG---AVQTAKVVSTRAAG-GLAYGFVEYGDVASAERAVRTM 62
Query: 204 TG-KWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQY 262
WLG+ I+ WA + + + ++ ++ +
Sbjct: 63 DAWLWLGT-PIKVCWARHSMHPDAVEAAEAERAGGMRGGAAAGNSH-------------- 107
Query: 263 TTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRD------KGFGFVRYSTHAEAALA 316
++VG+LAP+V +H F + + +VRV D +GFGF+ + +EA
Sbjct: 108 --LFVGDLAPDVDDAVVHAFFSRFAS--LADVRVMYDPETGKSRGFGFISLRSKSEAEEC 163
Query: 317 IQMGNTTQSSYLFGKQMKCSWGSK 340
I + TQ +L G+Q++ +W S+
Sbjct: 164 IAV---TQGRWLGGRQIRVNWASQ 184
Score = 42.4 bits (98), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 53/121 (43%), Gaps = 5/121 (4%)
Query: 143 NIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAIND 202
+++VG++SP T L F+ P RV RG+GFV+ + A SAI
Sbjct: 270 SVYVGNISPHTTPQDLVRIFA--PFNHGQRVEARIPPPPGRGYGFVTLTSHAQAASAICA 327
Query: 203 LT--GKWLGSRQIRCNW-ATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENN 259
L+ G +L SR +R W +G G+ +S A + T + K AP+
Sbjct: 328 LSMQGVFLHSRWLRFGWQKDRGPGSRMQHRSESAPESMLYTLHAQAQHKVPPIQHAPQQA 387
Query: 260 P 260
P
Sbjct: 388 P 388
>gi|324510042|gb|ADY44204.1| Nucleolysin TIAR [Ascaris suum]
Length = 367
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 81/219 (36%), Positives = 127/219 (57%), Gaps = 22/219 (10%)
Query: 124 IKVNWAYASGQ-REDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRS 182
+K NWA + + DTS HF++FVGDL+ E+ + L A F+ Y S+A+V+ D +T +S
Sbjct: 115 LKANWAMQNQMPKVDTSKHFHVFVGDLATEIDNNALKAAFAAYGEISEAKVIRDPQTMKS 174
Query: 183 RGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNG 242
+G+GFVSF +++ A+ AI + G+ +G RQIR NWA++ + E+ + + ++ E+ N
Sbjct: 175 KGYGFVSFPSKESAEKAIAGMNGQLIGRRQIRTNWASRKPASAEEAHTKE-QTFDEVFNA 233
Query: 243 SSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDKGF 302
+ D T+VYVGN+ T+ DL F S+GA I EVR+ + +G+
Sbjct: 234 TRADN---------------TSVYVGNVHSSTTEEDLREAFASIGA--ISEVRIFKQQGY 276
Query: 303 GFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSKP 341
FVRY+T A AI N + + G+ +KCSWG P
Sbjct: 277 AFVRYATKEAATRAIMQMNGKE---INGQNIKCSWGRTP 312
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 90/189 (47%), Gaps = 26/189 (13%)
Query: 49 PGFDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKS----SYGFIHYFDR 104
P D S V+VG++ T++ L+ F++ G + K+IR ++ YGF+ + +
Sbjct: 126 PKVDTSKHFHVFVGDLATEIDNNALKAAFAAYGEISEAKVIRDPQTMKSKGYGFVSFPSK 185
Query: 105 RSAAMAILSLNGRHLFGQPIKVNWAY---ASGQREDTSGH-----FN--------IFVGD 148
SA AI +NG+ + + I+ NWA AS + T FN ++VG+
Sbjct: 186 ESAEKAIAGMNGQLIGRRQIRTNWASRKPASAEEAHTKEQTFDEVFNATRADNTSVYVGN 245
Query: 149 LSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWL 208
+ T+ L F+ + S+ R+ + +G+ FV + ++ A AI + GK +
Sbjct: 246 VHSSTTEEDLREAFASIGAISEVRIF------KQQGYAFVRYATKEAATRAIMQMNGKEI 299
Query: 209 GSRQIRCNW 217
+ I+C+W
Sbjct: 300 NGQNIKCSW 308
>gi|32564504|ref|NP_495123.2| Protein TIAR-1, isoform e [Caenorhabditis elegans]
gi|373219013|emb|CCD65018.1| Protein TIAR-1, isoform e [Caenorhabditis elegans]
Length = 305
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 88/229 (38%), Positives = 132/229 (57%), Gaps = 26/229 (11%)
Query: 114 LNGRHLFGQPIKVNWAYASGQRE---DTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSD 170
+N R L + +KVNWA GQ++ DT+ HF++FVGDLS EV + L F + SD
Sbjct: 1 MNKRLLLDREMKVNWAVEPGQQQSKIDTTRHFHVFVGDLSSEVDNQKLREAFQPFGDVSD 60
Query: 171 ARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQS 230
A+V+ D T +S+G+GFVS+ +++A+ AI + G+WLG R IR NWAT+ G+ E
Sbjct: 61 AKVIRDTNTTKSKGYGFVSYPKREEAERAIEQMNGQWLGRRTIRTNWATRKPGDQEKPSH 120
Query: 231 SDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGV 290
+ KS E+ N +S D T+VYVGN+A +T+ ++ + F S G
Sbjct: 121 YNEKSYDEIYNQTSGDN---------------TSVYVGNIAS-LTEDEIRQGFASFGR-- 162
Query: 291 IEEVRVQRDKGFGFVRYSTHAEAALAI-QMGNTTQSSYLFGKQMKCSWG 338
I EVR+ + +G+ FV++ AA AI QM N + G+ ++CSWG
Sbjct: 163 ITEVRIFKMQGYAFVKFDNKDAAAKAIVQMNNQD----VGGQLVRCSWG 207
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 93/204 (45%), Gaps = 31/204 (15%)
Query: 39 IEPIPSGNLPPGFDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--- 95
+EP G D + V+VG++ ++V L+E F G V K+IR ++
Sbjct: 17 VEP---GQQQSKIDTTRHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSK 73
Query: 96 -YGFIHYFDRRSAAMAILSLNGRHLFGQPIKVNWAYASGQREDTSGHFN----------- 143
YGF+ Y R A AI +NG+ L + I+ NWA ++ H+N
Sbjct: 74 GYGFVSYPKREEAERAIEQMNGQWLGRRTIRTNWATRKPGDQEKPSHYNEKSYDEIYNQT 133
Query: 144 ------IFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQ 197
++VG+++ +T+ + F+ + ++ R+ + +G+ FV F N+ A
Sbjct: 134 SGDNTSVYVGNIAS-LTEDEIRQGFASFGRITEVRIF------KMQGYAFVKFDNKDAAA 186
Query: 198 SAINDLTGKWLGSRQIRCNWATKG 221
AI + + +G + +RC+W G
Sbjct: 187 KAIVQMNNQDVGGQLVRCSWGKTG 210
>gi|225428741|ref|XP_002285031.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
isoform 1 [Vitis vinifera]
Length = 416
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 102/299 (34%), Positives = 165/299 (55%), Gaps = 23/299 (7%)
Query: 56 CRSVYVGNIHTQVTEPLLQEVFSSTGPVE--GCKLIRKDKSS----YGFIHYFDRRSAAM 109
++++VG++H + + L+ F TG V+ K+IR ++ YGF+ +F R +A
Sbjct: 80 IKTLWVGDLHQWMDDNYLRTCFGHTGEVKVSSIKIIRNKQTGQSEGYGFVEFFSRATAEK 139
Query: 110 AILSLNGRHL--FGQPIKVNWA-YASG-QREDTSGHFNIFVGDLSPEVTDATLFACFSV- 164
+ S NG + QP ++NWA +++G +R D +IFVGDL+ +VTDA L F+
Sbjct: 140 ILHSYNGTLMPNTEQPFRLNWATFSTGDRRTDAGSDLSIFVGDLASDVTDALLQETFATR 199
Query: 165 YPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT-KGAG 223
YPS A+V+ D TGRS+G+GFV F ++ + A+N++ G + SR +R AT K A
Sbjct: 200 YPSVKGAKVVTDSNTGRSKGYGFVRFGDENERSRAMNEMNGIYCSSRPMRIGVATPKKAS 259
Query: 224 NNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHF 283
+ + SS A + L G++ +G ++A ++ TT++VG L EVT DL + F
Sbjct: 260 GYQQQYSSQA---LVLAGGNASNGAVAQGSQANGDSTN-TTIFVGGLDSEVTDEDLRQSF 315
Query: 284 HSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQ-MKCSWGSKP 341
G + V++ KG GFV+++ A A+Q N T + GKQ ++ SWG P
Sbjct: 316 SQFGE--VVSVKIPVGKGCGFVQFANRNSAEDALQRLNGT----VIGKQTVRLSWGRNP 368
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 89/200 (44%), Gaps = 40/200 (20%)
Query: 52 DPSTCRSVYVGNIHTQVTEPLLQEVFSSTGP-VEGCKLIRKDKSS----YGFIHYFDRRS 106
D + S++VG++ + VT+ LLQE F++ P V+G K++ + YGF+ + D
Sbjct: 171 DAGSDLSIFVGDLASDVTDALLQETFATRYPSVKGAKVVTDSNTGRSKGYGFVRFGDENE 230
Query: 107 AAMAILSLNGRHLFGQPIKV----------------------------NWAYASG-QRED 137
+ A+ +NG + +P+++ N A A G Q
Sbjct: 231 RSRAMNEMNGIYCSSRPMRIGVATPKKASGYQQQYSSQALVLAGGNASNGAVAQGSQANG 290
Query: 138 TSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQ 197
S + IFVG L EVTD L FS + ++ +G GFV F N+ A+
Sbjct: 291 DSTNTTIFVGGLDSEVTDEDLRQSFSQFGEVVSVKIP------VGKGCGFVQFANRNSAE 344
Query: 198 SAINDLTGKWLGSRQIRCNW 217
A+ L G +G + +R +W
Sbjct: 345 DALQRLNGTVIGKQTVRLSW 364
>gi|242042043|ref|XP_002468416.1| hypothetical protein SORBIDRAFT_01g045570 [Sorghum bicolor]
gi|241922270|gb|EER95414.1| hypothetical protein SORBIDRAFT_01g045570 [Sorghum bicolor]
Length = 415
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 96/296 (32%), Positives = 157/296 (53%), Gaps = 20/296 (6%)
Query: 56 CRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS----YGFIHYFDRRSAAMAI 111
R++++G++ E L F+ TG V+ K+IR +S YGFI + +A +
Sbjct: 14 VRTLWIGDLQYWTDENYLYSCFAHTGEVQSVKIIRNKVTSLPEGYGFIEFVSHEAAEKIL 73
Query: 112 LSLNGRHLFG--QPIKVNWA-YASGQRE-DTSGHFNIFVGDLSPEVTDATLFACFSV-YP 166
+ NG + G ++NWA ++SG+R D +IFVGDL+P+VTD L F V YP
Sbjct: 74 QTYNGTQMPGTEHTFRLNWASFSSGERRPDPGSDHSIFVGDLAPDVTDYLLQETFRVNYP 133
Query: 167 SCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNE 226
S A+V+ D TGRS+G+GFV F ++ + A+ ++ G + +R +R + A
Sbjct: 134 SVRGAKVVTDPNTGRSKGYGFVKFADENEKNRAMTEMNGVYCSTRPMRISAAIPKKSTGS 193
Query: 227 DKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSL 286
Q S AK+V T + + P+++P TT+++GNL P VT+ +L +
Sbjct: 194 QLQYSAAKAVYPATAYAMPQLQAVL----PDSDPTNTTIFIGNLDPNVTEDELRQICVQF 249
Query: 287 GAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQ-MKCSWGSKP 341
G + V++ KG GFV+Y++ A A A+Q + T + G+Q ++ SWG P
Sbjct: 250 GELIY--VKIPVGKGCGFVQYASRASAEEAVQRLHGT----MIGQQAVRLSWGRSP 299
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 84/199 (42%), Gaps = 39/199 (19%)
Query: 52 DPSTCRSVYVGNIHTQVTEPLLQEVFSSTGP-VEGCKLIRKDKS----SYGFIHYFDRRS 106
DP + S++VG++ VT+ LLQE F P V G K++ + YGF+ + D
Sbjct: 103 DPGSDHSIFVGDLAPDVTDYLLQETFRVNYPSVRGAKVVTDPNTGRSKGYGFVKFADENE 162
Query: 107 AAMAILSLNGRHLFGQPIKVN-----------------------WAYASGQR-----EDT 138
A+ +NG + +P++++ AYA Q +
Sbjct: 163 KNRAMTEMNGVYCSTRPMRISAAIPKKSTGSQLQYSAAKAVYPATAYAMPQLQAVLPDSD 222
Query: 139 SGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQS 198
+ IF+G+L P VT+ L C + K +G GFV + ++ A+
Sbjct: 223 PTNTTIFIGNLDPNVTEDELRQI------CVQFGELIYVKIPVGKGCGFVQYASRASAEE 276
Query: 199 AINDLTGKWLGSRQIRCNW 217
A+ L G +G + +R +W
Sbjct: 277 AVQRLHGTMIGQQAVRLSW 295
Score = 42.0 bits (97), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 56/115 (48%), Gaps = 8/115 (6%)
Query: 26 QSLYHPGLLAAPQIEPIPSGNLPPGFDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEG 85
+++Y A PQ++ + P DP T ++++GN+ VTE L+++ G +
Sbjct: 201 KAVYPATAYAMPQLQAVL-----PDSDP-TNTTIFIGNLDPNVTEDELRQICVQFGELIY 254
Query: 86 CKLIRKDKSSYGFIHYFDRRSAAMAILSLNGRHLFGQPIKVNWAYASGQREDTSG 140
K+ GF+ Y R SA A+ L+G + Q ++++W + ++D S
Sbjct: 255 VKI--PVGKGCGFVQYASRASAEEAVQRLHGTMIGQQAVRLSWGRSPASKQDPSA 307
>gi|444316792|ref|XP_004179053.1| hypothetical protein TBLA_0B07170 [Tetrapisispora blattae CBS 6284]
gi|387512093|emb|CCH59534.1| hypothetical protein TBLA_0B07170 [Tetrapisispora blattae CBS 6284]
Length = 470
Score = 148 bits (373), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 69/170 (40%), Positives = 104/170 (61%), Gaps = 4/170 (2%)
Query: 54 STCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKS---SYGFIHYFDRRSAAMA 110
++ + +YVGN+ + E L++ F GP+ K+I + +Y F+ Y A +A
Sbjct: 80 TSDKILYVGNLDKSINEDSLKQYFQVGGPIANVKIIVDKNNKYCNYAFVEYLKHHDANVA 139
Query: 111 ILSLNGRHLFGQPIKVNWAYASGQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSD 170
+ +LNG+H+ + +K+NWA+ S Q+ FN+F+GDL+ +V D +L A F +PS
Sbjct: 140 LQTLNGKHIEKKIVKINWAFQS-QQSSNDDTFNLFIGDLNIDVNDESLTAAFKDFPSFVQ 198
Query: 171 ARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATK 220
A VMWD +TGRSRG+GF SF Q DAQ A++ + GK L R IR NWA+K
Sbjct: 199 AHVMWDMQTGRSRGYGFASFSTQNDAQLAMDQMQGKELNGRPIRINWASK 248
>gi|410083501|ref|XP_003959328.1| hypothetical protein KAFR_0J01260 [Kazachstania africana CBS 2517]
gi|372465919|emb|CCF60193.1| hypothetical protein KAFR_0J01260 [Kazachstania africana CBS 2517]
Length = 365
Score = 148 bits (373), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 100/333 (30%), Positives = 165/333 (49%), Gaps = 35/333 (10%)
Query: 37 PQIEPIPSGNLPP-----GFDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRK 91
P +P N+ P G ++ + +Y+GN+ + E L++ F G + K++
Sbjct: 6 PSETVVPVENVIPASAKEGGRETSDKVLYIGNLDKSINEDALKQYFQVAGQIVDVKVMVD 65
Query: 92 DKSS---YGFIHYFDRRSAAMAILSLNGRHLFGQPIKVNWAYASGQREDTSGHFNIFVGD 148
K++ Y FI Y A +A+ +LNG + + IK+NWA+ S + FN+F+GD
Sbjct: 66 KKNNHVNYAFIEYSTNHDANVALQTLNGIQIENKNIKINWAFQSQTNLNDDTSFNLFIGD 125
Query: 149 LSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWL 208
L+ V D TL F P A VMWD +T RSRG+GFVSF ++AQ+A++ + G +
Sbjct: 126 LNVNVDDTTLANAFKSCPGFLQAHVMWDMQTSRSRGYGFVSFDTHENAQAAMDQMQGHEI 185
Query: 209 GSRQIRCNWATK--GAGNNEDKQSSDAKSVVELTNGSSEDGKET-------------TNT 253
R IR NWATK NN + +++ + ++ N +G++ N
Sbjct: 186 NGRAIRINWATKRENMNNNSNNNTNNNNNNNQVRNRMMMEGQQNMPPPPPPMGSLPPVNP 245
Query: 254 EAPENN-----PQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYS 308
+A E+ P+ TT Y+GN+ T+ DL + G I + +KG F++Y
Sbjct: 246 QAVEDMIRRAPPRVTTAYIGNIPHFATEPDLIPLLQNF--GFILDFTHYPEKGCCFIKYD 303
Query: 309 THAEAALAIQMGNTTQSSYLF-GKQMKCSWGSK 340
TH +AA+ I S++ F G+ ++ WG +
Sbjct: 304 THEQAAVCI----VALSNFQFQGRNLRTGWGKE 332
>gi|308480880|ref|XP_003102646.1| hypothetical protein CRE_03259 [Caenorhabditis remanei]
gi|308261080|gb|EFP05033.1| hypothetical protein CRE_03259 [Caenorhabditis remanei]
Length = 358
Score = 147 bits (372), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 84/219 (38%), Positives = 123/219 (56%), Gaps = 26/219 (11%)
Query: 135 REDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQ 194
R DTS HF++FVGDLS +V++ L + F Y S+A+V+ D +T +S+G+GFVSF N+Q
Sbjct: 126 RIDTSKHFHVFVGDLSKDVSNELLKSTFQKYGEVSEAKVIRDAQTQKSKGYGFVSFPNKQ 185
Query: 195 DAQSAINDLTGKWLGSRQIRCNWAT-KGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNT 253
+A++AI + GKW+G R +R NWA K + N DK + + ++ N + D
Sbjct: 186 NAENAIAGMNGKWIGKRAVRTNWAARKNSEENRDKLTFE-----QVFNSTKADN------ 234
Query: 254 EAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEA 313
T+VYVGN++ + T+ DL F + G I EVRV + + + FVRY A
Sbjct: 235 ---------TSVYVGNISQQTTETDLRESFSTYGD--IAEVRVFKTQRYAFVRYDKKECA 283
Query: 314 ALAIQMGNTTQSSYLFGKQMKCSWGSKPTPPGTSSNPLP 352
AI N + L G Q++CSWG P + NPLP
Sbjct: 284 TKAIMEMNGKE---LTGNQVRCSWGRTQAVPSQALNPLP 319
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 102/221 (46%), Gaps = 39/221 (17%)
Query: 17 LMQQALLQQQSLYHPGLLAAPQIEPIPSGNLPP---GFDPSTCRSVYVGNIHTQVTEPLL 73
L LLQ+ ++ H S + PP D S V+VG++ V+ LL
Sbjct: 103 LANAILLQESAVLH-------------SASEPPMEMRIDTSKHFHVFVGDLSKDVSNELL 149
Query: 74 QEVFSSTGPVEGCKLIRKDKSS----YGFIHYFDRRSAAMAILSLNGRHLFGQPIKVNWA 129
+ F G V K+IR ++ YGF+ + ++++A AI +NG+ + + ++ NWA
Sbjct: 150 KSTFQKYGEVSEAKVIRDAQTQKSKGYGFVSFPNKQNAENAIAGMNGKWIGKRAVRTNWA 209
Query: 130 YASGQRED-------------TSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWD 176
E+ + + +++VG++S + T+ L FS Y ++ RV
Sbjct: 210 ARKNSEENRDKLTFEQVFNSTKADNTSVYVGNISQQTTETDLRESFSTYGDIAEVRVFKT 269
Query: 177 QKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNW 217
Q+ + FV + ++ A AI ++ GK L Q+RC+W
Sbjct: 270 QR------YAFVRYDKKECATKAIMEMNGKELTGNQVRCSW 304
>gi|363750866|ref|XP_003645650.1| hypothetical protein Ecym_3344 [Eremothecium cymbalariae
DBVPG#7215]
gi|356889284|gb|AET38833.1| Hypothetical protein Ecym_3344 [Eremothecium cymbalariae
DBVPG#7215]
Length = 421
Score = 147 bits (372), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 104/363 (28%), Positives = 158/363 (43%), Gaps = 63/363 (17%)
Query: 54 STCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLI---RKDKSSYGFIHYFDRRSAAMA 110
++ R +YVGN+ + E L++ F GP+ K++ ++++Y F+ Y A +A
Sbjct: 60 TSDRILYVGNLDKAINEDTLKQYFQVGGPIANVKVLVDKNNEEANYAFVEYHQPHDANVA 119
Query: 111 ILSLNGRHLFGQPIKVNWAYASGQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSD 170
+L+G+ + G IK+NWA+ S Q + FN+FVGDL+ +V D TL F +PS
Sbjct: 120 FQTLDGKQIEGNVIKINWAFQS-QHVSSDDTFNLFVGDLNVDVDDETLTGTFKEFPSFIQ 178
Query: 171 ARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQS 230
A VMWD +GRSRG+GFVSF Q AQ A+ G L R IR NWA+K +
Sbjct: 179 AHVMWDMLSGRSRGYGFVSFSEQDVAQQAMESKQGFILNGRAIRINWASKREPQQHQPRP 238
Query: 231 SDAKSVVELTNGSSEDGKETTNTEAPENNP------------------------------ 260
+ NG S P +P
Sbjct: 239 RSNRGGFRNNNGPSHQQFRGIPQGHPMGSPNNAGPMGMAPQGMAPQGIPPQGPVVPPPVN 298
Query: 261 -------------QYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRY 307
+ TT Y+GN+ + DL + G I + + +KG F++Y
Sbjct: 299 PQAVEAMIRRAPQRVTTAYIGNIPHFAQEPDLIPLLQNF--GFIIDFKHYPEKGCCFIKY 356
Query: 308 STHAEAALAIQMGNTTQSSYLF-GKQMKCSWG-SKPT--------PPGTSSNPLPPPAAA 357
TH +AA+ I +++ F G+ ++ WG KP PP +P P A
Sbjct: 357 DTHEQAAVCI----VALANFPFQGRNLRTGWGKEKPAFIPNGMVPPPQQLLHPSQQPIDA 412
Query: 358 PIP 360
P+P
Sbjct: 413 PVP 415
>gi|403213707|emb|CCK68209.1| hypothetical protein KNAG_0A05440 [Kazachstania naganishii CBS
8797]
Length = 442
Score = 147 bits (371), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 74/189 (39%), Positives = 109/189 (57%), Gaps = 3/189 (1%)
Query: 41 PIPSGNLPPGFDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSSY---G 97
P+ N G ++ R +YVGN+ +TE +L++ F G + K++ KS+Y
Sbjct: 63 PVVPANATHGGRETSDRVLYVGNLDKSITEDILKQYFQVAGQIVDVKVMIDKKSNYVNYA 122
Query: 98 FIHYFDRRSAAMAILSLNGRHLFGQPIKVNWAYASGQREDTSGHFNIFVGDLSPEVTDAT 157
F+ Y A++A+ +LNG + +K+N A+ S Q FN+FVGDL+ ++ D T
Sbjct: 123 FVEYAKAHDASVALQTLNGIQIENNKVKINRAFQSQQSTTDDSTFNLFVGDLNIDIDDDT 182
Query: 158 LFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNW 217
L F +PS A VMWD +TGRSRG+GFVSF +Q+ AQ A+ ++ GK L R IR NW
Sbjct: 183 LSRSFKDFPSYIQAHVMWDMQTGRSRGYGFVSFADQEQAQKAMEEMQGKELNGRPIRINW 242
Query: 218 ATKGAGNNE 226
ATK N +
Sbjct: 243 ATKRDNNQQ 251
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 42/82 (51%), Gaps = 7/82 (8%)
Query: 260 PQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQM 319
P+ +T Y+GN+ T+ DL S G I + +KG F++Y TH +AA+ I
Sbjct: 336 PRVSTAYIGNIPHFATEADLIPLLQSFG--FILDFTHYPEKGCCFIKYDTHEQAAVCI-- 391
Query: 320 GNTTQSSYLF-GKQMKCSWGSK 340
+++ F G+ ++ WG +
Sbjct: 392 --VALANFNFQGRNLRTGWGKE 411
>gi|391332510|ref|XP_003740677.1| PREDICTED: nucleolysin TIAR-like [Metaseiulus occidentalis]
Length = 341
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 87/232 (37%), Positives = 132/232 (56%), Gaps = 16/232 (6%)
Query: 117 RHLFGQPIKVNWAY--ASGQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVM 174
+ + +K NW+ A + DT+ HF+IFVGDLS +V L F+ + SD RV+
Sbjct: 21 KTFLSREMKGNWSNSPAGSTKPDTNKHFHIFVGDLSSDVETQQLREAFTPFGEISDCRVV 80
Query: 175 WDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQ--SSD 232
D +T +S+G+GFVSF +QDA++AIN + G+WLG R IR NWAT+ +N + Q S
Sbjct: 81 RDPQTQKSKGYGFVSFLRKQDAETAINAMNGQWLGGRVIRTNWATRRPASNANNQQEGSQ 140
Query: 233 AKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIE 292
S + T + + E N +P N TVY G L +++ + + F S G+I+
Sbjct: 141 GNSTPKYTPLTFD---EVYNQASPTN----CTVYCGGLGQGLSEELIQKTFSSY--GIIQ 191
Query: 293 EVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSKPTPP 344
E+RV +DKG+ FVR++T A AI + T + G+ +KCSWG + + P
Sbjct: 192 EIRVFKDKGYAFVRFATKESATHAIVAVHNTDVN---GQIVKCSWGKESSDP 240
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 105/227 (46%), Gaps = 40/227 (17%)
Query: 43 PSGNLPPGFDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIR----KDKSSYGF 98
P+G+ P D + ++VG++ + V L+E F+ G + C+++R + YGF
Sbjct: 36 PAGSTKP--DTNKHFHIFVGDLSSDVETQQLREAFTPFGEISDCRVVRDPQTQKSKGYGF 93
Query: 99 IHYFDRRSAAMAILSLNGRHLFGQPIKVNWAY------ASGQREDTSGH----------- 141
+ + ++ A AI ++NG+ L G+ I+ NWA A+ Q+E + G+
Sbjct: 94 VSFLRKQDAETAINAMNGQWLGGRVIRTNWATRRPASNANNQQEGSQGNSTPKYTPLTFD 153
Query: 142 --FN--------IFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFR 191
+N ++ G L +++ + FS Y + RV D +G+ FV F
Sbjct: 154 EVYNQASPTNCTVYCGGLGQGLSEELIQKTFSSYGIIQEIRVFKD------KGYAFVRFA 207
Query: 192 NQQDAQSAINDLTGKWLGSRQIRCNWATKGAG-NNEDKQSSDAKSVV 237
++ A AI + + + ++C+W + + NN+ Q + A + +
Sbjct: 208 TKESATHAIVAVHNTDVNGQIVKCSWGKESSDPNNQQVQHTIAAAQI 254
>gi|45201486|ref|NP_987056.1| AGR390Cp [Ashbya gossypii ATCC 10895]
gi|44986420|gb|AAS54880.1| AGR390Cp [Ashbya gossypii ATCC 10895]
gi|374110307|gb|AEY99212.1| FAGR390Cp [Ashbya gossypii FDAG1]
Length = 378
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 100/326 (30%), Positives = 159/326 (48%), Gaps = 48/326 (14%)
Query: 54 STCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLI---RKDKSSYGFIHYFDRRSAAMA 110
++ R +YVGN+ + E L++ F GP+ K++ ++++Y F+ Y R A +A
Sbjct: 32 TSDRILYVGNLDKTINEATLKQYFQVGGPIANVKVLVDKNNEEANYAFVEYRQPRDANVA 91
Query: 111 ILSLNGRHLFGQPIKVNWAYASGQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSD 170
+L+G+ + IK+NWA+ S Q+ + FN+FVGDL+ +V D TL + F +P+
Sbjct: 92 FQTLDGKQIENNVIKINWAFQS-QQVSSDDTFNLFVGDLNVDVDDETLSSTFKEFPTFIQ 150
Query: 171 ARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQS 230
A VMWD ++GRSRG+GFVSF Q++AQ A++ G L R IR NWA K E + +
Sbjct: 151 AHVMWDMQSGRSRGYGFVSFGEQEEAQKAMDAKQGFNLNGRAIRVNWAAK----RESQHA 206
Query: 231 SDAKSVVELTNGSSEDGKETTNTEAPE--------------------NNPQ--------- 261
+ +S G S + P NPQ
Sbjct: 207 ARPRSNRGGFRGGSGHQPFRGMPQGPHLGGAAPAGPMQLQGPPVPSPVNPQAVEAMIRRA 266
Query: 262 ---YTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQ 318
TT Y+GN+ + DL + G I + + +KG F++Y TH +AAL I
Sbjct: 267 PQRVTTAYIGNIPHFAQEPDLIPLLQNF--GFIIDFKHYAEKGCCFIKYDTHDQAALCI- 323
Query: 319 MGNTTQSSYLF-GKQMKCSWG-SKPT 342
+++ F G+ ++ WG KP+
Sbjct: 324 ---VALANFPFQGRTLRTGWGKEKPS 346
>gi|68478681|ref|XP_716609.1| hypothetical protein CaO19.7368 [Candida albicans SC5314]
gi|46438281|gb|EAK97614.1| hypothetical protein CaO19.7368 [Candida albicans SC5314]
gi|238880985|gb|EEQ44623.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 510
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 81/172 (47%), Positives = 107/172 (62%), Gaps = 9/172 (5%)
Query: 57 RSVYVGNIHTQVTEPLLQEVFSSTG-PVEGCKLIR-KDKS--SYGFIHYFDRRSAAMAIL 112
+ +YVGN+ +E +QE+FS G PV+ K++ K+K+ +Y FI Y A MA+
Sbjct: 79 KILYVGNLPKSASEETIQELFSVGGNPVKTIKILNDKNKAGFNYAFIEYDTNEVADMALN 138
Query: 113 SLNGRHLFGQPIKVNWAYAS----GQREDTSG-HFNIFVGDLSPEVTDATLFACFSVYPS 167
+LNGR + IKVNWA+ S G +T FNIFVGDLSPEV D L FS + S
Sbjct: 139 TLNGRLVDDVEIKVNWAFQSAAIAGNPNNTEEPLFNIFVGDLSPEVNDEGLRNAFSKFES 198
Query: 168 CSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT 219
A VMWD +T RSRG+GFV+F NQ DA+ A+ + G+WL R IRCNWA+
Sbjct: 199 LKQAHVMWDMQTSRSRGYGFVTFGNQSDAELALQTMNGEWLCGRAIRCNWAS 250
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 88/200 (44%), Gaps = 34/200 (17%)
Query: 144 IFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDL 203
++VG+L ++ T+ FSV + + + K + F+ + + A A+N L
Sbjct: 81 LYVGNLPKSASEETIQELFSVGGNPVKTIKILNDKNKAGFNYAFIEYDTNEVADMALNTL 140
Query: 204 TGKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYT 263
G+ + +I+ NWA + S+ NTE P N
Sbjct: 141 NGRLVDDVEIKVNWAFQ----------------------SAAIAGNPNNTEEPLFN---- 174
Query: 264 TVYVGNLAPEVTQLDLHRHFHSLG----AGVIEEVRVQRDKGFGFVRYSTHAEAALAIQM 319
++VG+L+PEV L F A V+ +++ R +G+GFV + ++A LA+Q
Sbjct: 175 -IFVGDLSPEVNDEGLRNAFSKFESLKQAHVMWDMQTSRSRGYGFVTFGNQSDAELALQ- 232
Query: 320 GNTTQSSYLFGKQMKCSWGS 339
T +L G+ ++C+W S
Sbjct: 233 --TMNGEWLCGRAIRCNWAS 250
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 44/83 (53%), Gaps = 8/83 (9%)
Query: 263 TTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALA-IQMGN 321
TTVY+GN+A Q +L + G I + + ++G FV+Y TH AALA IQ+
Sbjct: 412 TTVYLGNIAHFTQQQELIPLLQNFG--FIVDFKFHPERGCAFVKYDTHERAALAIIQLAG 469
Query: 322 TTQSSYLFGKQMKCSWGSKPTPP 344
L G+ +KC WG K PP
Sbjct: 470 FN----LNGRPLKCGWG-KERPP 487
>gi|365983576|ref|XP_003668621.1| hypothetical protein NDAI_0B03440 [Naumovozyma dairenensis CBS 421]
gi|343767388|emb|CCD23378.1| hypothetical protein NDAI_0B03440 [Naumovozyma dairenensis CBS 421]
Length = 499
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 69/170 (40%), Positives = 106/170 (62%), Gaps = 3/170 (1%)
Query: 54 STCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKS---SYGFIHYFDRRSAAMA 110
++ R +YVGN+ + E LL++ F G + K++ K+ +Y F+ Y A +A
Sbjct: 84 TSDRVLYVGNLDKSINEDLLKQYFQVGGQITDVKIMVDKKNQNVNYAFVEYLKSHDANVA 143
Query: 111 ILSLNGRHLFGQPIKVNWAYASGQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSD 170
+ +LNG + + IK+NWA+ S Q +++ FN+FVGDL+ +V D TL + F +PS
Sbjct: 144 LQTLNGIQIENKIIKINWAFQSQQNLNSNDTFNLFVGDLNIDVDDETLSSNFKNFPSYIQ 203
Query: 171 ARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATK 220
A VMWD +T RSRG+GFVSF ++ AQ+A++ + GK + R IR NWATK
Sbjct: 204 AHVMWDMQTSRSRGYGFVSFADRDQAQNAMDTMQGKEINGRPIRINWATK 253
Score = 41.6 bits (96), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 43/84 (51%), Gaps = 7/84 (8%)
Query: 260 PQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQM 319
P+ TT Y+GN+ T+ DL + G I + +KG F++Y TH +AA+ I
Sbjct: 363 PRVTTAYIGNIPHFATEADLIPLLQTFG--FILDFSHYPEKGCCFIKYDTHEQAAVCI-- 418
Query: 320 GNTTQSSYLF-GKQMKCSWGSKPT 342
+++ F G+ ++ WG + T
Sbjct: 419 --VALANFPFQGRNLRTGWGKERT 440
>gi|242033859|ref|XP_002464324.1| hypothetical protein SORBIDRAFT_01g016170 [Sorghum bicolor]
gi|241918178|gb|EER91322.1| hypothetical protein SORBIDRAFT_01g016170 [Sorghum bicolor]
Length = 409
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 98/295 (33%), Positives = 152/295 (51%), Gaps = 27/295 (9%)
Query: 56 CRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS----YGFIHYFDRRSAAMAI 111
R++++G++ + E L FS G V K+IR ++ YGFI + + A +
Sbjct: 71 ARTLWIGDLQYWMDENYLYSCFSQAGEVISVKIIRNKQTGQPEGYGFIEFGNHALAEQVL 130
Query: 112 LSLNGRHL--FGQPIKVNWAY--ASGQREDTSGHFNIFVGDLSPEVTDATLFACF-SVYP 166
+ NG+ + QP K+NWA A +R D + IFVGDL+ +VTD L F S YP
Sbjct: 131 QNYNGQMMPNVNQPFKLNWATSGAGEKRGDDGSDYTIFVGDLASDVTDFILQDTFKSRYP 190
Query: 167 SCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNE 226
S A+V++D+ TGRS+G+GFV F + + A+ ++ G++ SR +R A+ N
Sbjct: 191 SVKSAKVVFDRTTGRSKGYGFVKFADLDEQTRAMTEMNGQYCSSRPMRLGPASN--KKNT 248
Query: 227 DKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSL 286
Q + ++ + T G+ D ++P TTV+VG L P VT L + F
Sbjct: 249 GGQPQPSSTIYQNTQGTDSD-----------SDPNNTTVFVGGLDPSVTDELLKQTFSPY 297
Query: 287 GAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSKP 341
G + V++ K GFV+YS A A AI+M N +Q L G+ ++ SWG P
Sbjct: 298 GE--LLYVKIPVGKRCGFVQYSNRASAEEAIRMLNGSQ---LGGQSIRLSWGRSP 347
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 86/191 (45%), Gaps = 30/191 (15%)
Query: 52 DPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS-----YGFIHYFDRRS 106
D + +++VG++ + VT+ +LQ+ F S P + D+++ YGF+ + D
Sbjct: 160 DDGSDYTIFVGDLASDVTDFILQDTFKSRYPSVKSAKVVFDRTTGRSKGYGFVKFADLDE 219
Query: 107 AAMAILSLNGRHLFGQPIKVNWA----------------YASGQREDTSGHFN---IFVG 147
A+ +NG++ +P+++ A Y + Q D+ N +FVG
Sbjct: 220 QTRAMTEMNGQYCSSRPMRLGPASNKKNTGGQPQPSSTIYQNTQGTDSDSDPNNTTVFVG 279
Query: 148 DLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKW 207
L P VTD L FS Y ++ ++ G FV + N+ A+ AI L G
Sbjct: 280 GLDPSVTDELLKQTFSPYGELLYVKIPVGKRCG------FVQYSNRASAEEAIRMLNGSQ 333
Query: 208 LGSRQIRCNWA 218
LG + IR +W
Sbjct: 334 LGGQSIRLSWG 344
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 47/85 (55%), Gaps = 3/85 (3%)
Query: 52 DPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSSYGFIHYFDRRSAAMAI 111
DP+ +V+VG + VT+ LL++ FS G + K+ + GF+ Y +R SA AI
Sbjct: 270 DPNNT-TVFVGGLDPSVTDELLKQTFSPYGELLYVKIPVGKRC--GFVQYSNRASAEEAI 326
Query: 112 LSLNGRHLFGQPIKVNWAYASGQRE 136
LNG L GQ I+++W + ++
Sbjct: 327 RMLNGSQLGGQSIRLSWGRSPANKQ 351
>gi|367016631|ref|XP_003682814.1| hypothetical protein TDEL_0G02360 [Torulaspora delbrueckii]
gi|359750477|emb|CCE93603.1| hypothetical protein TDEL_0G02360 [Torulaspora delbrueckii]
Length = 402
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 97/333 (29%), Positives = 154/333 (46%), Gaps = 50/333 (15%)
Query: 54 STCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS---YGFIHYFDRRSAAMA 110
++ + +YVGN+ T + E +L++ F GP+ K++ +S Y F+ YF A +A
Sbjct: 41 TSDKVLYVGNLDTSINEEILKQYFQVGGPIANVKIMVDKNNSNANYAFVEYFQSHDANIA 100
Query: 111 ILSLNGRHLFGQPIKVNWAYASGQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSD 170
+ +LNG+ + +K+NWA+ S Q FN+FVGDL+ +V D TL F +P+
Sbjct: 101 LQTLNGKQIENNVVKINWAFQSQQVSPDEATFNLFVGDLNVDVDDETLRNAFKEFPTYLQ 160
Query: 171 ARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAG------- 223
VMWD +TG SRG+GFVSF +Q++AQ A++ + G L R +R NWA+K
Sbjct: 161 GHVMWDMQTGGSRGYGFVSFGSQEEAQKAMDAMQGHELNGRPLRINWASKRENNNNNNRR 220
Query: 224 ------------NNEDKQSSDAKSV-----VELTNGSSEDGKETTNTEAPE----NNPQY 262
NN S + + L G + N P NPQ
Sbjct: 221 NVNGPRNNGFRHNNGGFPGSRGMPMPPPNSMSLPMGVVPPPQALGNPNGPSVPPPVNPQA 280
Query: 263 TTVYVGNLAPEVT------------QLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTH 310
+ P VT + DL + G I + + +KG F++Y TH
Sbjct: 281 VDSMIRRAPPRVTTAYIGNIPHFAIEADLIPLLQNFG--FIIDFKHYPEKGCCFIKYDTH 338
Query: 311 AEAALAIQMGNTTQSSYLF-GKQMKCSWGSKPT 342
+AA+ I +++ F G+ ++ WG + T
Sbjct: 339 EQAAVCI----VALANFPFQGRNLRTGWGKERT 367
>gi|341903554|gb|EGT59489.1| CBN-TIAR-3 protein [Caenorhabditis brenneri]
Length = 417
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 83/219 (37%), Positives = 122/219 (55%), Gaps = 26/219 (11%)
Query: 135 REDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQ 194
R DTS HF++FVGDLS +V++ L + F Y S+A+V+ D +T +S+G+GFVSF N+Q
Sbjct: 185 RIDTSKHFHVFVGDLSKDVSNDLLKSTFQKYGEVSEAKVIRDAQTQKSKGYGFVSFPNKQ 244
Query: 195 DAQSAINDLTGKWLGSRQIRCNWAT-KGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNT 253
+A++AI + GKW+G R +R NWA K + N DK + + ++ N + D
Sbjct: 245 NAENAIAGMNGKWIGKRAVRTNWAARKNSEENRDKLTFE-----QVFNSTKADN------ 293
Query: 254 EAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEA 313
T+VYVGN++ + T DL F + G I EVRV + + + FVRY A
Sbjct: 294 ---------TSVYVGNISQQTTDADLRDSFSTYGD--IAEVRVFKTQRYAFVRYDKKECA 342
Query: 314 ALAIQMGNTTQSSYLFGKQMKCSWGSKPTPPGTSSNPLP 352
AI N + + G Q++CSWG P + NPLP
Sbjct: 343 TKAIMEMNGKE---MAGNQVRCSWGRTQAVPNQALNPLP 378
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 94/193 (48%), Gaps = 23/193 (11%)
Query: 51 FDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS----YGFIHYFDRRS 106
D S V+VG++ V+ LL+ F G V K+IR ++ YGF+ + ++++
Sbjct: 186 IDTSKHFHVFVGDLSKDVSNDLLKSTFQKYGEVSEAKVIRDAQTQKSKGYGFVSFPNKQN 245
Query: 107 AAMAILSLNGRHLFGQPIKVNWAYASGQRED-------------TSGHFNIFVGDLSPEV 153
A AI +NG+ + + ++ NWA E+ + + +++VG++S +
Sbjct: 246 AENAIAGMNGKWIGKRAVRTNWAARKNSEENRDKLTFEQVFNSTKADNTSVYVGNISQQT 305
Query: 154 TDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQI 213
TDA L FS Y ++ RV Q+ + FV + ++ A AI ++ GK + Q+
Sbjct: 306 TDADLRDSFSTYGDIAEVRVFKTQR------YAFVRYDKKECATKAIMEMNGKEMAGNQV 359
Query: 214 RCNWATKGAGNNE 226
RC+W A N+
Sbjct: 360 RCSWGRTQAVPNQ 372
>gi|75334879|sp|Q9LEB3.1|RBP47_NICPL RecName: Full=Polyadenylate-binding protein RBP47;
Short=Poly(A)-binding protein RBP47; AltName:
Full=RNA-binding protein 47; Short=NplRBP47
gi|9663769|emb|CAC01238.1| RNA Binding Protein 47 [Nicotiana plumbaginifolia]
Length = 428
Score = 145 bits (365), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 97/295 (32%), Positives = 160/295 (54%), Gaps = 20/295 (6%)
Query: 57 RSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS----YGFIHYFDRRSAAMAIL 112
+++++G++ + E L FS G V K+IR ++ YGF+ + +A +
Sbjct: 84 KTIWIGDLQQWMDESYLHSCFSQAGEVISVKIIRNKQTGQSERYGFVEFNTHAAAEKVLQ 143
Query: 113 SLNGRHL--FGQPIKVNWA-YASGQ-REDTSGHFNIFVGDLSPEVTDATLFACF-SVYPS 167
S NG + QP ++NWA +++G+ R +T F+IFVGDL+ +VTD L F S YPS
Sbjct: 144 SYNGTMMPNTEQPFRLNWAGFSTGEKRAETGSDFSIFVGDLASDVTDTMLRDTFASRYPS 203
Query: 168 CSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNED 227
A+V+ D TG S+G+GFV F ++ + A+ ++ G + SR +R AT + +
Sbjct: 204 LKGAKVVVDANTGHSKGYGFVRFGDESERSRAMTEMNGVYCSSRAMRIGVATPKKPSAHE 263
Query: 228 KQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLG 287
+ SS A V L+ G + +G T +++ + + TT++VG L EVT +L + F+ G
Sbjct: 264 QYSSQA---VILSGGYASNGAATHGSQS-DGDSSNTTIFVGGLDSEVTDEELRQSFNQFG 319
Query: 288 AGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQ-MKCSWGSKP 341
+ V++ KG GFV++S + A AIQ S + GKQ ++ SWG P
Sbjct: 320 E--VVSVKIPAGKGCGFVQFSDRSSAQEAIQ----KLSGAIIGKQAVRLSWGRSP 368
Score = 42.0 bits (97), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 42/76 (55%), Gaps = 2/76 (2%)
Query: 54 STCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSSYGFIHYFDRRSAAMAILS 113
S+ +++VG + ++VT+ L++ F+ G V K+ GF+ + DR SA AI
Sbjct: 292 SSNTTIFVGGLDSEVTDEELRQSFNQFGEVVSVKI--PAGKGCGFVQFSDRSSAQEAIQK 349
Query: 114 LNGRHLFGQPIKVNWA 129
L+G + Q ++++W
Sbjct: 350 LSGAIIGKQAVRLSWG 365
>gi|356510359|ref|XP_003523906.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
[Glycine max]
Length = 409
Score = 144 bits (364), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 101/297 (34%), Positives = 157/297 (52%), Gaps = 37/297 (12%)
Query: 57 RSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS----YGFIHYFDRRSAAMAIL 112
++V+VG++H + E L F+STG + K+IR ++ YGF+ ++ +A +
Sbjct: 80 KTVWVGDLHHWMDENYLHRCFASTGEISSIKVIRNKQTGLSEGYGFVEFYSHGTADKVLQ 139
Query: 113 SLNGRHL--FGQPIKVNWA-YASG-QREDTSGHFNIFVGDLSPEVTDATLFACFS-VYPS 167
+ G + QP ++NWA +++G +R D +IFVGDL+ +VTD+ L F+ YPS
Sbjct: 140 NYAGILMPNTEQPFRLNWATFSTGDKRSDNVPDLSIFVGDLAADVTDSMLHETFTNRYPS 199
Query: 168 CSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT--KGAGNN 225
A+V++D TGRS+G+GFV F + + A+ ++ G + SR +R AT K +G
Sbjct: 200 VKAAKVVFDANTGRSKGYGFVRFGDDNERSQAMTEMNGVYCSSRPMRIGAATPRKTSGYQ 259
Query: 226 EDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHS 285
+ QS NG+S + +EA N TT++VG L P VT DL + F
Sbjct: 260 QGSQS----------NGTS------SQSEADSTN---TTIFVGGLDPNVTAEDLKQPFSQ 300
Query: 286 LGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQM-KCSWGSKP 341
G I V++ KG GFV+++ A A+Q N T GKQM + SWG P
Sbjct: 301 YGE--IVSVKIPVGKGCGFVQFANRNNAEEALQKLNGT----TIGKQMVRLSWGRSP 351
Score = 38.5 bits (88), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 23/94 (24%), Positives = 46/94 (48%), Gaps = 2/94 (2%)
Query: 54 STCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSSYGFIHYFDRRSAAMAILS 113
ST +++VG + VT L++ FS G + K+ GF+ + +R +A A+
Sbjct: 275 STNTTIFVGGLDPNVTAEDLKQPFSQYGEIVSVKIPVGKGC--GFVQFANRNNAEEALQK 332
Query: 114 LNGRHLFGQPIKVNWAYASGQREDTSGHFNIFVG 147
LNG + Q ++++W + ++ + N + G
Sbjct: 333 LNGTTIGKQMVRLSWGRSPANKQFRADFGNAWSG 366
>gi|254576977|ref|XP_002494475.1| ZYRO0A02398p [Zygosaccharomyces rouxii]
gi|238937364|emb|CAR25542.1| ZYRO0A02398p [Zygosaccharomyces rouxii]
Length = 410
Score = 144 bits (363), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 102/354 (28%), Positives = 162/354 (45%), Gaps = 53/354 (14%)
Query: 38 QIEPIPSGNLPPGFDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCK-LIRKD--KS 94
+ P+ N G ++ R +YVGN+ +TE +L++ F G + K +I K+ ++
Sbjct: 37 ETTPVVPANATKGGRETSDRVLYVGNLDKSITEEVLRQYFQVGGQISNVKVMIDKNNARA 96
Query: 95 SYGFIHYFDRRSAAMAILSLNGRHLFGQPIKVNWAYASGQREDTSGHFNIFVGDLSPEVT 154
+Y F+ YF A +A+ +LNG+ + +++NWA+ S Q +N+FVGDLS +V
Sbjct: 97 NYAFVEYFKSHDANIALQTLNGKQIENNVVRINWAFQSQQALPDENTYNLFVGDLSVDVD 156
Query: 155 DATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIR 214
D TL F +PS VMWD +TG SRG+GFVSF +Q+ AQ A++ + + L R +R
Sbjct: 157 DETLCNAFRSFPSFIQGHVMWDMQTGGSRGYGFVSFGDQEQAQLAMDSMQSQELNGRPLR 216
Query: 215 CNWATKGA----GNNEDKQSSDAKSVVEL------------------TNGSSEDGKETTN 252
NWA+K GN + + + L + G G N
Sbjct: 217 INWASKRENHHNGNRRGGLAGNRNGGMRLFPNNNNGFGRGMPMPPPNSMGIPLGGTLPPN 276
Query: 253 -------------TEAPENNPQYTTVYVGNLAPEVTQLDLHR--HFHS--------LGAG 289
T P NPQ + P VT + HF + G
Sbjct: 277 AQPMGAPPSGPAPTVPPPVNPQAVEAMIRRAPPRVTTSYIGNIPHFATDSDLIPLLQNFG 336
Query: 290 VIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLF-GKQMKCSWGSKPT 342
I + + +KG FV+Y TH +AA+ I +++ F G+ ++ WG + T
Sbjct: 337 FILDFKHYPEKGCCFVKYDTHEQAAVCI----VALANFFFQGRNLRTGWGKERT 386
>gi|392927018|ref|NP_509705.3| Protein TIAR-3 [Caenorhabditis elegans]
gi|211970450|emb|CAB01717.3| Protein TIAR-3 [Caenorhabditis elegans]
Length = 450
Score = 144 bits (363), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 81/219 (36%), Positives = 123/219 (56%), Gaps = 26/219 (11%)
Query: 135 REDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQ 194
R DTS HF++FVGDLS +V++ L + F+ + S+A+V+ D +T +S+G+GFVSF N+Q
Sbjct: 218 RIDTSKHFHVFVGDLSKDVSNELLKSTFTKFGEVSEAKVIRDVQTQKSKGYGFVSFPNKQ 277
Query: 195 DAQSAINDLTGKWLGSRQIRCNWAT-KGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNT 253
+A++AI + GKW+G R +R NWA K + N DK + + ++ N + D
Sbjct: 278 NAENAIAGMNGKWIGKRAVRTNWAARKNSEENRDKLTFE-----QVFNSTKADN------ 326
Query: 254 EAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEA 313
T+VYVGN++ + T DL F + G I EVR+ + + + FVRY A
Sbjct: 327 ---------TSVYVGNISQQTTDADLRDLFSTYGD--IAEVRIFKTQRYAFVRYEKKECA 375
Query: 314 ALAIQMGNTTQSSYLFGKQMKCSWGSKPTPPGTSSNPLP 352
AI N + + G Q++CSWG P + NPLP
Sbjct: 376 TKAIMEMNGKEMA---GNQVRCSWGRTQAVPNQALNPLP 411
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 98/203 (48%), Gaps = 26/203 (12%)
Query: 44 SGNLPP---GFDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIR----KDKSSY 96
S + PP D S V+VG++ V+ LL+ F+ G V K+IR + Y
Sbjct: 209 SASEPPMEMRIDTSKHFHVFVGDLSKDVSNELLKSTFTKFGEVSEAKVIRDVQTQKSKGY 268
Query: 97 GFIHYFDRRSAAMAILSLNGRHLFGQPIKVNWAYASGQRED-------------TSGHFN 143
GF+ + ++++A AI +NG+ + + ++ NWA E+ + + +
Sbjct: 269 GFVSFPNKQNAENAIAGMNGKWIGKRAVRTNWAARKNSEENRDKLTFEQVFNSTKADNTS 328
Query: 144 IFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDL 203
++VG++S + TDA L FS Y ++ R+ Q+ + FV + ++ A AI ++
Sbjct: 329 VYVGNISQQTTDADLRDLFSTYGDIAEVRIFKTQR------YAFVRYEKKECATKAIMEM 382
Query: 204 TGKWLGSRQIRCNWATKGAGNNE 226
GK + Q+RC+W A N+
Sbjct: 383 NGKEMAGNQVRCSWGRTQAVPNQ 405
>gi|328715704|ref|XP_001946343.2| PREDICTED: nucleolysin TIA-1 isoform p40-like isoform 1
[Acyrthosiphon pisum]
Length = 419
Score = 144 bits (363), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 89/239 (37%), Positives = 129/239 (53%), Gaps = 23/239 (9%)
Query: 114 LNGRHLFG-QPIKVNWAYASGQ--REDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSD 170
+NG G + +K+NW + G + DTS H +IFVGDLSPE+ TL F+ + SD
Sbjct: 64 VNGNAAAGLKEMKLNWVSSPGPQLKADTSKHHHIFVGDLSPEIETQTLREAFAPFGEISD 123
Query: 171 ARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQS 230
RV+ D +T +S+G+GFVSF + +A+SAI + G+WLGSR IR NWAT+ + +
Sbjct: 124 CRVVRDPQTLKSKGYGFVSFLKKAEAESAIAAMNGQWLGSRSIRTNWATRKPPTLKTDSN 183
Query: 231 SDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGV 290
+ + E+ N SS P TVY G L +T + + F G
Sbjct: 184 TKPLTFDEVYNQSS---------------PTNCTVYCGGLTSGLTDELVQKTFAPFGN-- 226
Query: 291 IEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSKPTPPGTSSN 349
I+E+RV +DKG+ FVR++T A AI +S + G+ +KCSWG + P S N
Sbjct: 227 IQEIRVFKDKGYAFVRFATKESATHAIV---AVHNSDINGQPVKCSWGKESGEPIVSQN 282
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/187 (21%), Positives = 85/187 (45%), Gaps = 27/187 (14%)
Query: 52 DPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKS----SYGFIHYFDRRSA 107
D S ++VG++ ++ L+E F+ G + C+++R ++ YGF+ + + A
Sbjct: 90 DTSKHHHIFVGDLSPEIETQTLREAFAPFGEISDCRVVRDPQTLKSKGYGFVSFLKKAEA 149
Query: 108 AMAILSLNGRHLFGQPIKVNWA-----------------YASGQREDTSGHFNIFVGDLS 150
AI ++NG+ L + I+ NWA + + + + ++ G L+
Sbjct: 150 ESAIAAMNGQWLGSRSIRTNWATRKPPTLKTDSNTKPLTFDEVYNQSSPTNCTVYCGGLT 209
Query: 151 PEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGS 210
+TD + F+ + + + RV D +G+ FV F ++ A AI + +
Sbjct: 210 SGLTDELVQKTFAPFGNIQEIRVFKD------KGYAFVRFATKESATHAIVAVHNSDING 263
Query: 211 RQIRCNW 217
+ ++C+W
Sbjct: 264 QPVKCSW 270
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 66/136 (48%), Gaps = 10/136 (7%)
Query: 6 LKQQQQQQQQALMQQALLQQQSLYHPGLLAAPQIEPIPSGNLPPGFD-------PSTCRS 58
LK+ + + A M L +S+ P S P FD P+ C +
Sbjct: 144 LKKAEAESAIAAMNGQWLGSRSIRTNWATRKPPTLKTDSNTKPLTFDEVYNQSSPTNC-T 202
Query: 59 VYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSSYGFIHYFDRRSAAMAILSLNGRH 118
VY G + + +T+ L+Q+ F+ G ++ ++ KDK Y F+ + + SA AI++++
Sbjct: 203 VYCGGLTSGLTDELVQKTFAPFGNIQEIRVF-KDKG-YAFVRFATKESATHAIVAVHNSD 260
Query: 119 LFGQPIKVNWAYASGQ 134
+ GQP+K +W SG+
Sbjct: 261 INGQPVKCSWGKESGE 276
>gi|357480263|ref|XP_003610417.1| RNA-binding protein [Medicago truncatula]
gi|355511472|gb|AES92614.1| RNA-binding protein [Medicago truncatula]
Length = 411
Score = 144 bits (362), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 97/326 (29%), Positives = 167/326 (51%), Gaps = 29/326 (8%)
Query: 34 LAAPQIEPIPSGNLPPGFDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDK 93
+ AP +P +PP +++++G++ + E L FS TG V K+IR +
Sbjct: 51 MWAPNAQPPQQSAVPPPSSADEVKTLWIGDLQYWMDENYLYNCFSHTGEVGSVKVIRNKQ 110
Query: 94 SS----YGFIHYFDRRSAAMAILSLNGRHL--FGQPIKVNWA-YASGQ-REDTSGHFNIF 145
++ YGF+ + R A + + NG + GQ ++NWA ++SG+ R D S + IF
Sbjct: 111 TNQSEGYGFLEFISRAGAERVLQTFNGTIMPNGGQNFRLNWATFSSGEKRHDDSPDYTIF 170
Query: 146 VGDLSPEVTDATLFACFSV-YPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLT 204
VGDL+ +V+D L F Y S A+V+ D+ TGR++G+GFV F ++ + A+ ++
Sbjct: 171 VGDLAADVSDHHLTEVFRTRYNSVKGAKVVIDRTTGRTKGYGFVRFADESEQMRAMTEMQ 230
Query: 205 GKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTT 264
G +R +R G +N++ + +K+ + G +++ EN+P TT
Sbjct: 231 GVLCSTRPMRI-----GPASNKNLGTQTSKASYQNPQGGAQN----------ENDPNNTT 275
Query: 265 VYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQ 324
++VGNL P VT L + F G V V++ K GFV+++ + A A+++ N T
Sbjct: 276 IFVGNLDPNVTDEHLKQVFTQYGELV--HVKIPSGKRCGFVQFADRSSAEEALRVLNGT- 332
Query: 325 SSYLFGKQMKCSWGSKPTPPGTSSNP 350
L G+ ++ SWG P T +P
Sbjct: 333 --LLGGQNVRLSWGRSPANKQTQQDP 356
>gi|293337265|ref|NP_001168324.1| uncharacterized protein LOC100382091 [Zea mays]
gi|223947441|gb|ACN27804.1| unknown [Zea mays]
gi|223947469|gb|ACN27818.1| unknown [Zea mays]
gi|413933766|gb|AFW68317.1| hypothetical protein ZEAMMB73_975236, partial [Zea mays]
Length = 406
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 97/295 (32%), Positives = 152/295 (51%), Gaps = 28/295 (9%)
Query: 56 CRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS----YGFIHYFDRRSAAMAI 111
R++++G++ + E L FS G V K+IR ++ YGFI + + A +
Sbjct: 69 ARTLWIGDLQYWMDENYLYSCFSQAGEVISVKIIRNKQTGQPEGYGFIEFSNHAVAEQVL 128
Query: 112 LSLNGRHL--FGQPIKVNWAY--ASGQREDTSGHFNIFVGDLSPEVTDATLFACF-SVYP 166
+ NG+ + QP K+NWA A +R D + IFVGDL+ +VTD L F S YP
Sbjct: 129 QNYNGQMMPNVNQPFKLNWATSGAGEKRGDDGSDYTIFVGDLASDVTDFILQDTFKSRYP 188
Query: 167 SCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNE 226
S A+V++D+ TGRS+G+GFV F + + A+ ++ G++ SR +R A+
Sbjct: 189 SVKGAKVVFDRTTGRSKGYGFVKFADSDEQTRAMTEMNGQYCSSRAMRLGPASNKKNTGG 248
Query: 227 DKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSL 286
+ SS ++ + T G+ D ++P TTV+VG L P VT L + F
Sbjct: 249 PQPSS---AIYQNTQGTDSD-----------SDPNNTTVFVGGLDPSVTDELLKQTFSPY 294
Query: 287 GAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSKP 341
G + V++ K GFV+YS A A AI++ N +Q L G+ ++ SWG P
Sbjct: 295 GE--LLYVKIPVGKRCGFVQYSNRASAEEAIRVLNGSQ---LGGQSIRLSWGRSP 344
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 90/191 (47%), Gaps = 31/191 (16%)
Query: 52 DPSTCRSVYVGNIHTQVTEPLLQEVFSSTGP-VEGCKLIRKDKSS-----YGFIHYFDRR 105
D + +++VG++ + VT+ +LQ+ F S P V+G K++ D+++ YGF+ + D
Sbjct: 158 DDGSDYTIFVGDLASDVTDFILQDTFKSRYPSVKGAKVVF-DRTTGRSKGYGFVKFADSD 216
Query: 106 SAAMAILSLNGRHLFGQPIKVNWA---------------YASGQREDTSGHFN---IFVG 147
A+ +NG++ + +++ A Y + Q D+ N +FVG
Sbjct: 217 EQTRAMTEMNGQYCSSRAMRLGPASNKKNTGGPQPSSAIYQNTQGTDSDSDPNNTTVFVG 276
Query: 148 DLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKW 207
L P VTD L FS Y ++ ++ G FV + N+ A+ AI L G
Sbjct: 277 GLDPSVTDELLKQTFSPYGELLYVKIPVGKRCG------FVQYSNRASAEEAIRVLNGSQ 330
Query: 208 LGSRQIRCNWA 218
LG + IR +W
Sbjct: 331 LGGQSIRLSWG 341
>gi|2708532|gb|AAB92518.1| putative RNA binding protein [Nicotiana tabacum]
Length = 482
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 96/295 (32%), Positives = 160/295 (54%), Gaps = 20/295 (6%)
Query: 57 RSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS----YGFIHYFDRRSAAMAIL 112
+++++G++ + E L FS G V K+IR ++ YGF+ + +A +
Sbjct: 138 KTIWIGDLQQWMDESYLHSCFSQAGEVISVKIIRNKQTGQSERYGFVEFNTHAAAEKVLQ 197
Query: 113 SLNGRHL--FGQPIKVNWA-YASGQ-REDTSGHFNIFVGDLSPEVTDATLFACF-SVYPS 167
S NG + QP ++NWA +++G+ R +T F+IFVGDL+ +VTD L F S YPS
Sbjct: 198 SYNGTMMPNAEQPFRLNWAGFSTGEKRAETGSDFSIFVGDLASDVTDTMLRDTFASRYPS 257
Query: 168 CSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNED 227
A+V+ D TG S+G+GFV F ++ + A+ ++ G + SR +R AT + +
Sbjct: 258 LKGAKVVVDANTGHSKGYGFVRFGDESERSRAMTEMNGVYCSSRAMRIGVATPKKPSAQQ 317
Query: 228 KQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLG 287
+ SS A V L+ G + +G T +++ + + TT++VG L +VT +L + F+ G
Sbjct: 318 QYSSQA---VILSGGYASNGAATHGSQS-DGDASNTTIFVGGLDSDVTDEELRQSFNQFG 373
Query: 288 AGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQ-MKCSWGSKP 341
+ V++ KG GFV++S + A AIQ S + GKQ ++ SWG P
Sbjct: 374 E--VVSVKIPAGKGCGFVQFSDRSSAQEAIQ----KLSGAIIGKQAVRLSWGRSP 422
>gi|32564506|ref|NP_871980.1| Protein TIAR-1, isoform f [Caenorhabditis elegans]
gi|373219014|emb|CCD65019.1| Protein TIAR-1, isoform f [Caenorhabditis elegans]
Length = 295
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 85/219 (38%), Positives = 127/219 (57%), Gaps = 26/219 (11%)
Query: 124 IKVNWAYASGQRE---DTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTG 180
+KVNWA GQ++ DT+ HF++FVGDLS EV + L F + SDA+V+ D T
Sbjct: 1 MKVNWAVEPGQQQSKIDTTRHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTT 60
Query: 181 RSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELT 240
+S+G+GFVS+ +++A+ AI + G+WLG R IR NWAT+ G+ E + KS E+
Sbjct: 61 KSKGYGFVSYPKREEAERAIEQMNGQWLGRRTIRTNWATRKPGDQEKPSHYNEKSYDEIY 120
Query: 241 NGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDK 300
N +S D T+VYVGN+A +T+ ++ + F S G I EVR+ + +
Sbjct: 121 NQTSGDN---------------TSVYVGNIAS-LTEDEIRQGFASFGR--ITEVRIFKMQ 162
Query: 301 GFGFVRYSTHAEAALAI-QMGNTTQSSYLFGKQMKCSWG 338
G+ FV++ AA AI QM N + G+ ++CSWG
Sbjct: 163 GYAFVKFDNKDAAAKAIVQMNNQD----VGGQLVRCSWG 197
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 93/204 (45%), Gaps = 31/204 (15%)
Query: 39 IEPIPSGNLPPGFDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--- 95
+EP G D + V+VG++ ++V L+E F G V K+IR ++
Sbjct: 7 VEP---GQQQSKIDTTRHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSK 63
Query: 96 -YGFIHYFDRRSAAMAILSLNGRHLFGQPIKVNWAYASGQREDTSGHFN----------- 143
YGF+ Y R A AI +NG+ L + I+ NWA ++ H+N
Sbjct: 64 GYGFVSYPKREEAERAIEQMNGQWLGRRTIRTNWATRKPGDQEKPSHYNEKSYDEIYNQT 123
Query: 144 ------IFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQ 197
++VG+++ +T+ + F+ + ++ R+ + +G+ FV F N+ A
Sbjct: 124 SGDNTSVYVGNIAS-LTEDEIRQGFASFGRITEVRIF------KMQGYAFVKFDNKDAAA 176
Query: 198 SAINDLTGKWLGSRQIRCNWATKG 221
AI + + +G + +RC+W G
Sbjct: 177 KAIVQMNNQDVGGQLVRCSWGKTG 200
>gi|255544854|ref|XP_002513488.1| nuclear acid binding protein, putative [Ricinus communis]
gi|223547396|gb|EEF48891.1| nuclear acid binding protein, putative [Ricinus communis]
Length = 412
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 101/312 (32%), Positives = 163/312 (52%), Gaps = 25/312 (8%)
Query: 43 PSGNLPPGF-DPST---CRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--- 95
P+ P G+ P+T R++++G++ V E L F+ TG V K+IR +
Sbjct: 4 PTATNPGGYHQPATLEEVRTLWIGDLQYWVDENYLSSCFAHTGEVLSIKIIRNKITGQPE 63
Query: 96 -YGFIHYFDRRSAAMAILSLNGRHLFG--QPIKVNWA-YASGQREDTSG-HFNIFVGDLS 150
YGF+ + +A + + NG + G Q ++NWA + G+R +G +IFVGDLS
Sbjct: 64 GYGFVEFVSHVAAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDLS 123
Query: 151 PEVTDATLFACFSV-YPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLG 209
P+VTD L F YPS A+V+ D TGRS+G+GFV F ++ + A+ ++ G +
Sbjct: 124 PDVTDYLLQETFRANYPSVRGAKVVTDPNTGRSKGYGFVKFGDENERNRAMTEMNGVFCS 183
Query: 210 SRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGN 269
+R +R + AT +Q + AK++ L ++ +N+ TT++VGN
Sbjct: 184 TRPMRISAATPKKTAAYQQQYATAKAIYPLPAYTAP-----VQVVPADNDITNTTIFVGN 238
Query: 270 LAPEVTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLF 329
L P VT+ +L F L G I V++ +G GFV+++T A A AIQ ++
Sbjct: 239 LDPNVTEEELRPIF--LQFGEIVYVKIPVGRGCGFVQFATRASAEEAIQR----MQGHVI 292
Query: 330 GKQ-MKCSWGSK 340
G+Q ++ SWG K
Sbjct: 293 GQQPVRISWGRK 304
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 85/197 (43%), Gaps = 38/197 (19%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGP-VEGCKLIRKDKSS----YGFIHYFDRRSAAMAIL 112
S++VG++ VT+ LLQE F + P V G K++ + YGF+ + D A+
Sbjct: 116 SIFVGDLSPDVTDYLLQETFRANYPSVRGAKVVTDPNTGRSKGYGFVKFGDENERNRAMT 175
Query: 113 SLNGRHLFGQPIKVNWA-----------YASGQR----------------EDTSGHFNIF 145
+NG +P++++ A YA+ + ++ + IF
Sbjct: 176 EMNGVFCSTRPMRISAATPKKTAAYQQQYATAKAIYPLPAYTAPVQVVPADNDITNTTIF 235
Query: 146 VGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTG 205
VG+L P VT+ L F + ++ RG GFV F + A+ AI + G
Sbjct: 236 VGNLDPNVTEEELRPIFLQFGEIVYVKIP------VGRGCGFVQFATRASAEEAIQRMQG 289
Query: 206 KWLGSRQIRCNWATKGA 222
+G + +R +W K A
Sbjct: 290 HVIGQQPVRISWGRKQA 306
>gi|15239715|ref|NP_197436.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|75331115|sp|Q8VXZ9.1|R47BP_ARATH RecName: Full=Polyadenylate-binding protein RBP47B';
Short=Poly(A)-binding protein RBP47B'; AltName:
Full=RNA-binding protein 47B'; Short=AtRBP47B prime;
Short=AtRBP47B'
gi|18377731|gb|AAL67015.1| putative DNA binding protein ACBF [Arabidopsis thaliana]
gi|21281189|gb|AAM45052.1| putative DNA binding protein ACBF [Arabidopsis thaliana]
gi|332005306|gb|AED92689.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 425
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 110/370 (29%), Positives = 175/370 (47%), Gaps = 20/370 (5%)
Query: 56 CRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS----YGFIHYFDRRSAAMAI 111
R++++G++ V E L FS TG + K+IR + YGFI + +A +
Sbjct: 23 VRTLWIGDLQYWVDENYLTSCFSQTGELVSVKVIRNKITGQPEGYGFIEFISHAAAERTL 82
Query: 112 LSLNGRHLFGQPI--KVNWA-YASGQREDTSGHFNIFVGDLSPEVTDATLFACFSV-YPS 167
+ NG + G + ++NWA + SGQ+ D +IFVGDL+P+VTD L F V Y S
Sbjct: 83 QTYNGTQMPGTELTFRLNWASFGSGQKVDAGPDHSIFVGDLAPDVTDYLLQETFRVHYSS 142
Query: 168 CSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNED 227
A+V+ D TGRS+G+GFV F + + A+ ++ G + +R +R + AT N
Sbjct: 143 VRGAKVVTDPSTGRSKGYGFVKFAEESERNRAMAEMNGLYCSTRPMRISAATP-KKNVGV 201
Query: 228 KQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLG 287
+Q K+V +T S+ PE++ TT+ V NL VT+ +L + F LG
Sbjct: 202 QQQYVTKAVYPVTVPSAVAAPVQAYVAPPESDVTCTTISVANLDQNVTEEELKKAFSQLG 261
Query: 288 AGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSKPTPPGTS 347
+ V++ KG+G+V++ T A A+Q Q + + ++ SW P G
Sbjct: 262 EVIY--VKIPATKGYGYVQFKTRPSAEEAVQR---MQGQVIGQQAVRISWSKNPGQDGWV 316
Query: 348 SNPLPPPAAAPIPGLSAADLLAY--ERQIAMSKMGGVHALMHPQ---AQHPLKQAAMGVG 402
+ P D AY + ++ GG +PQ + +A G G
Sbjct: 317 TQADPNQWNGYYGYGQGYDAYAYGATQDPSVYAYGGYGYPQYPQQGEGTQDISNSAAG-G 375
Query: 403 SAGASQAIYD 412
AGA Q +YD
Sbjct: 376 VAGAEQELYD 385
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 57/115 (49%), Gaps = 6/115 (5%)
Query: 23 LQQQSL---YHPGLLAAPQIEPIPSGNLPPGFDPSTCRSVYVGNIHTQVTEPLLQEVFSS 79
+QQQ + +P + + P+ + PP D TC ++ V N+ VTE L++ FS
Sbjct: 201 VQQQYVTKAVYPVTVPSAVAAPVQAYVAPPESD-VTCTTISVANLDQNVTEEELKKAFSQ 259
Query: 80 TGPVEGCKLIRKDKSSYGFIHYFDRRSAAMAILSLNGRHLFGQPIKVNWAYASGQ 134
G V K+ YG++ + R SA A+ + G+ + Q ++++W+ GQ
Sbjct: 260 LGEVIYVKI--PATKGYGYVQFKTRPSAEEAVQRMQGQVIGQQAVRISWSKNPGQ 312
>gi|226506980|ref|NP_001152183.1| LOC100285821 [Zea mays]
gi|195653617|gb|ACG46276.1| RNA-binding post-transcriptional regulator csx1 [Zea mays]
Length = 415
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 96/303 (31%), Positives = 157/303 (51%), Gaps = 20/303 (6%)
Query: 56 CRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS----YGFIHYFDRRSAAMAI 111
R++++G++ E L F+ TG V+ K+IR +S YGFI + +A +
Sbjct: 14 VRTLWIGDLQYWTDENYLYSCFAHTGEVQSVKIIRNKVTSLPEGYGFIEFVSHEAAEKIL 73
Query: 112 LSLNGRHLFG--QPIKVNWA-YASGQRE-DTSGHFNIFVGDLSPEVTDATLFACFSV-YP 166
+ NG + G ++NWA ++SG+R D +IFVGDL+P+VTD L F V Y
Sbjct: 74 QTYNGTQMPGTEHTFRLNWASFSSGERRPDPGSDHSIFVGDLAPDVTDYLLQETFRVNYS 133
Query: 167 SCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNE 226
S A+V+ D TGRS+G+GFV F ++ + A+ ++ G + +R +R + A
Sbjct: 134 SVRGAKVVTDPNTGRSKGYGFVKFADENEKNRAMTEMNGVYCSTRPMRISAAIPKKSTGS 193
Query: 227 DKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSL 286
Q S AK+V T + + P+++P TT+++GNL P V + +L +
Sbjct: 194 QLQYSAAKAVYPATAYAMPQLQAVL----PDSDPTNTTIFIGNLDPNVIEDELRQICVQF 249
Query: 287 GAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQ-MKCSWGSKPTPPG 345
G + V++ KG GFV+Y++ A A A+Q + T + G+Q ++ SWG P
Sbjct: 250 GELIY--VKIPVGKGCGFVQYASRASAEEAVQRLHGT----MIGQQAVRLSWGRSPASKQ 303
Query: 346 TSS 348
SS
Sbjct: 304 DSS 306
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 88/215 (40%), Gaps = 43/215 (20%)
Query: 52 DPSTCRSVYVGNIHTQVTEPLLQEVFS-STGPVEGCKLIRKDKS----SYGFIHYFDRRS 106
DP + S++VG++ VT+ LLQE F + V G K++ + YGF+ + D
Sbjct: 103 DPGSDHSIFVGDLAPDVTDYLLQETFRVNYSSVRGAKVVTDPNTGRSKGYGFVKFADENE 162
Query: 107 AAMAILSLNGRHLFGQPIKVN-----------------------WAYASGQR-----EDT 138
A+ +NG + +P++++ AYA Q +
Sbjct: 163 KNRAMTEMNGVYCSTRPMRISAAIPKKSTGSQLQYSAAKAVYPATAYAMPQLQAVLPDSD 222
Query: 139 SGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQS 198
+ IF+G+L P V + L C + K +G GFV + ++ A+
Sbjct: 223 PTNTTIFIGNLDPNVIEDELRQI------CVQFGELIYVKIPVGKGCGFVQYASRASAEE 276
Query: 199 AINDLTGKWLGSRQIRCNWATKGAGNNEDKQSSDA 233
A+ L G +G + +R +W A KQ S A
Sbjct: 277 AVQRLHGTMIGQQAVRLSWGRSPAS----KQDSSA 307
>gi|238005936|gb|ACR34003.1| unknown [Zea mays]
gi|414865083|tpg|DAA43640.1| TPA: RNA-binding post-transcriptional regulator csx1 [Zea mays]
Length = 415
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 94/296 (31%), Positives = 155/296 (52%), Gaps = 20/296 (6%)
Query: 56 CRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS----YGFIHYFDRRSAAMAI 111
R++++G++ E L F+ TG V+ K+IR +S YGFI + +A +
Sbjct: 14 VRTLWIGDLQYWTDENYLYSCFAHTGEVQSVKIIRNKVTSLPEGYGFIEFVSHEAAEKIL 73
Query: 112 LSLNGRHLFG--QPIKVNWA-YASGQRE-DTSGHFNIFVGDLSPEVTDATLFACFSV-YP 166
+ NG + G ++NWA ++SG+R D +IFVGDL+P+VTD L F V Y
Sbjct: 74 QTYNGTQMPGTEHTFRLNWASFSSGERRPDPGSDHSIFVGDLAPDVTDYLLQETFRVNYS 133
Query: 167 SCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNE 226
S A+V+ D TGRS+G+GFV F ++ + A+ ++ G + +R +R + A
Sbjct: 134 SVRGAKVVTDPNTGRSKGYGFVKFADENEKNRAMTEMNGVYCSTRPMRISAAIPKKSTGS 193
Query: 227 DKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSL 286
Q S AK+V T + + P+++P TT+++GNL P V + +L +
Sbjct: 194 QLQYSAAKAVYPATAYAMPQLQAVL----PDSDPTNTTIFIGNLDPNVIEDELRQICVQF 249
Query: 287 GAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQ-MKCSWGSKP 341
G + V++ KG GFV+Y++ A A A+Q + T + G+Q ++ SWG P
Sbjct: 250 GELIY--VKIPVGKGCGFVQYASRASAEEAVQRLHGT----MIGQQAVRLSWGRSP 299
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 88/215 (40%), Gaps = 43/215 (20%)
Query: 52 DPSTCRSVYVGNIHTQVTEPLLQEVFS-STGPVEGCKLIRKDKS----SYGFIHYFDRRS 106
DP + S++VG++ VT+ LLQE F + V G K++ + YGF+ + D
Sbjct: 103 DPGSDHSIFVGDLAPDVTDYLLQETFRVNYSSVRGAKVVTDPNTGRSKGYGFVKFADENE 162
Query: 107 AAMAILSLNGRHLFGQPIKVN-----------------------WAYASGQR-----EDT 138
A+ +NG + +P++++ AYA Q +
Sbjct: 163 KNRAMTEMNGVYCSTRPMRISAAIPKKSTGSQLQYSAAKAVYPATAYAMPQLQAVLPDSD 222
Query: 139 SGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQS 198
+ IF+G+L P V + L C + K +G GFV + ++ A+
Sbjct: 223 PTNTTIFIGNLDPNVIEDELRQI------CVQFGELIYVKIPVGKGCGFVQYASRASAEE 276
Query: 199 AINDLTGKWLGSRQIRCNWATKGAGNNEDKQSSDA 233
A+ L G +G + +R +W A KQ S A
Sbjct: 277 AVQRLHGTMIGQQAVRLSWGRSPAS----KQDSSA 307
>gi|294884878|gb|ADF47447.1| TIA1-like protein [Dugesia japonica]
Length = 323
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 102/316 (32%), Positives = 153/316 (48%), Gaps = 40/316 (12%)
Query: 57 RSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRK---DKSSYGFIHYFDRRSAAMAILS 113
R++YVGN+ V + LL +F + G C +IR + Y FI Y D SA++A+ +
Sbjct: 7 RTIYVGNLPDAVNDQLLIRIFGNFGQCISCHIIRDFSCQTNPYAFIEYTDHSSASLALSA 66
Query: 114 LNGRHLFGQPIKVNW----------AYASGQREDTSGHFNIFVGDLSPEVTDATLFACFS 163
++G +++ IKVNW A + + D S IFVGD+ +V + L FS
Sbjct: 67 MDGIYMWNNQIKVNWSSGPSAVPGPAAVASAKIDYSNSVQIFVGDIGLDVDEPMLKEGFS 126
Query: 164 VYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAG 223
+ DA+V+ G+SRGF FVSF N+ +A+ AI + W +R I+CNWAT+
Sbjct: 127 QFGQLIDAKVV-RYPDGQSRGFAFVSFSNRDEAERAIQSMHKTWFHNRTIKCNWATRNG- 184
Query: 224 NNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVG--NLAPEVTQLDLHR 281
D + ++ T E EAP N T VYV NL E+ L+
Sbjct: 185 -------LDGEQFIKYT----PRPYELVYKEAPLTN---TNVYVAGENLTEEL----LNC 226
Query: 282 HFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSKP 341
HF G I+ V+V +KG F+ + TH AA AI + + + +KC+WG +
Sbjct: 227 HFQEFGR--IDSVKVYPEKGHAFINFVTHEAAARAISQRHGYK---INDNVIKCNWGKEN 281
Query: 342 TPPGTSSNPLPPPAAA 357
T++ P PA A
Sbjct: 282 FGISTATIPALQPAMA 297
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 83/209 (39%), Gaps = 28/209 (13%)
Query: 35 AAPQIEPIPSGNLPPGFDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRK--- 91
+ P P P+ D S ++VG+I V EP+L+E FS G + K++R
Sbjct: 83 SGPSAVPGPAAVASAKIDYSNSVQIFVGDIGLDVDEPMLKEGFSQFGQLIDAKVVRYPDG 142
Query: 92 DKSSYGFIHYFDRRSAAMAILSLNGRHLFGQPIKVNWAYASG-----------------Q 134
+ F+ + +R A AI S++ + IK NWA +G
Sbjct: 143 QSRGFAFVSFSNRDEAERAIQSMHKTWFHNRTIKCNWATRNGLDGEQFIKYTPRPYELVY 202
Query: 135 REDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQ 194
+E + N++V +T+ L F + +V +G F++F +
Sbjct: 203 KEAPLTNTNVYVA--GENLTEELLNCHFQEFGRIDSVKVY------PEKGHAFINFVTHE 254
Query: 195 DAQSAINDLTGKWLGSRQIRCNWATKGAG 223
A AI+ G + I+CNW + G
Sbjct: 255 AAARAISQRHGYKINDNVIKCNWGKENFG 283
>gi|388507756|gb|AFK41944.1| unknown [Medicago truncatula]
Length = 411
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 97/326 (29%), Positives = 166/326 (50%), Gaps = 29/326 (8%)
Query: 34 LAAPQIEPIPSGNLPPGFDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDK 93
+ AP +P +PP ++++G++ + E L FS TG V K+IR +
Sbjct: 51 MWAPNAQPPQQSAVPPPSSADEVETLWIGDLQYWMDENYLYNCFSHTGEVGSVKVIRNKQ 110
Query: 94 SS----YGFIHYFDRRSAAMAILSLNGRHL--FGQPIKVNWA-YASGQ-REDTSGHFNIF 145
++ YGF+ + R A + + NG + GQ ++NWA ++SG+ R D S + IF
Sbjct: 111 TNQSEGYGFLEFISRAGAERVLQTFNGTIMPNGGQNFRLNWATFSSGEKRHDDSPDYTIF 170
Query: 146 VGDLSPEVTDATLFACFSV-YPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLT 204
VGDL+ +V+D L F Y S A+V+ D+ TGR++G+GFV F ++ + A+ ++
Sbjct: 171 VGDLAADVSDHHLTEVFRTRYNSVKGAKVVIDRTTGRTKGYGFVRFADESEQMRAMTEMQ 230
Query: 205 GKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTT 264
G +R +R G +N++ + +K+ + G +++ EN+P TT
Sbjct: 231 GVLCSTRPMRI-----GPASNKNLGTQTSKASYQNPQGGAQN----------ENDPNNTT 275
Query: 265 VYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQ 324
++VGNL P VT L + F G V V++ K GFV+++ + A A+++ N T
Sbjct: 276 IFVGNLDPNVTDEHLKQVFTQYGELV--HVKIPSGKRCGFVQFADRSSAEEALRVLNGT- 332
Query: 325 SSYLFGKQMKCSWGSKPTPPGTSSNP 350
L G+ ++ SWG P T +P
Sbjct: 333 --LLGGQNVRLSWGRSPANKQTQQDP 356
>gi|168049769|ref|XP_001777334.1| predicted protein [Physcomitrella patens subsp. patens]
gi|168061528|ref|XP_001782740.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162665773|gb|EDQ52446.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671310|gb|EDQ57864.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 416
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 96/298 (32%), Positives = 155/298 (52%), Gaps = 18/298 (6%)
Query: 56 CRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSSY----GFIHYFDRRSAAMAI 111
++++VG++ + E L F TG V+ K+IR ++ Y GF+ + +A +
Sbjct: 7 VKTLWVGDLQYWMDENYLHTAFVHTGEVQSVKIIRNKQTGYSEGYGFVEFVSHAAAEKIL 66
Query: 112 LSLNGRHLFG--QPIKVNWA-YASGQREDTSG-HFNIFVGDLSPEVTDATLFACFSV-YP 166
+ NG + QP ++NWA + G+R +G +IFVGDL+P+VTD L F YP
Sbjct: 67 QAYNGTQMPNTEQPFRLNWASFGIGERRPEAGPEHSIFVGDLAPDVTDYMLQETFRTRYP 126
Query: 167 SCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT--KGAGN 224
S A+V+ D TGRS+G+GFV F ++ + A++++ G + SR +R + AT K G
Sbjct: 127 SVKGAKVVTDANTGRSKGYGFVRFGDEMERNRAMSEMNGVYCSSRPMRISAATPKKSLGP 186
Query: 225 NEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFH 284
+ DA S V + ++ + + +N+P TT++VG L P V DL F
Sbjct: 187 AQLNPKVDAVSPVAVATYAAYGAQPSPQAFPVDNDPNNTTIFVGGLDPAVGDEDLRNVFG 246
Query: 285 SLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQ-MKCSWGSKP 341
G V V++ KG GFV+++ A A A+Q + T + G Q ++ SWG P
Sbjct: 247 QFGELVY--VKIPAGKGCGFVQFTHRACAEEALQRLHQT----VIGTQAVRLSWGRSP 298
>gi|255538402|ref|XP_002510266.1| nuclear acid binding protein, putative [Ricinus communis]
gi|223550967|gb|EEF52453.1| nuclear acid binding protein, putative [Ricinus communis]
Length = 443
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 98/300 (32%), Positives = 156/300 (52%), Gaps = 38/300 (12%)
Query: 57 RSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS----YGFIHYFDRRSAAMAIL 112
R+V++G++H + E L F+STG + K+IR ++ YGF+ ++ +A +
Sbjct: 109 RTVWIGDLHHWMDENYLHTCFASTGEIVSIKVIRNKQTGLSEGYGFVEFYTHATAEKVLQ 168
Query: 113 SLNGRHL--FGQPIKVNWA-YASG-QREDTSGHFNIFVGDLSPEVTDATLFACF-SVYPS 167
+ G + QP ++NWA +++G +R D + +IFVGDL+ +VTD+ L F S YPS
Sbjct: 169 NYAGILMPNTEQPFRLNWATFSTGDKRSDNAPDLSIFVGDLAADVTDSLLHETFVSRYPS 228
Query: 168 CSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNED 227
A+V++D TGRS+G+GFV F + + A+ ++ G + SR +R AT
Sbjct: 229 VKAAKVVFDANTGRSKGYGFVRFGDDNERTQAMTEMNGVYCSSRAMRIGAATPRKSTGYQ 288
Query: 228 KQSSDAKSVVELTNGSS-----EDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRH 282
Q ++NG+S DG T TT++VG L P VT DL +
Sbjct: 289 HQGG------YVSNGASGQAFQADGDSTN-----------TTIFVGGLDPNVTDEDLKQP 331
Query: 283 FHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQ-MKCSWGSKP 341
F G I V++ KG GFV++++ + A A+Q N T + GKQ ++ SWG P
Sbjct: 332 FSQYGE--IVSVKIPVGKGCGFVQFASRSNAEEALQKLNGT----VIGKQTVRLSWGRNP 385
Score = 38.1 bits (87), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 39/76 (51%), Gaps = 2/76 (2%)
Query: 54 STCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSSYGFIHYFDRRSAAMAILS 113
ST +++VG + VT+ L++ FS G + K+ GF+ + R +A A+
Sbjct: 309 STNTTIFVGGLDPNVTDEDLKQPFSQYGEIVSVKIPVGKGC--GFVQFASRSNAEEALQK 366
Query: 114 LNGRHLFGQPIKVNWA 129
LNG + Q ++++W
Sbjct: 367 LNGTVIGKQTVRLSWG 382
>gi|9294614|dbj|BAB02953.1| DNA/RNA binding protein-like [Arabidopsis thaliana]
Length = 489
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 97/298 (32%), Positives = 158/298 (53%), Gaps = 22/298 (7%)
Query: 56 CRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS----YGFIHYFDRRSAAMAI 111
++++VG++ + E L FS TG V K+IR +S YGF+ + R +A +
Sbjct: 107 VKTLWVGDLLHWMDETYLHSCFSHTGEVSSVKVIRNKLTSQSEGYGFVEFLSRAAAEEVL 166
Query: 112 LSLNGRHL--FGQPIKVNWA-YASGQRE--DTSGHFNIFVGDLSPEVTDATLFACFS-VY 165
+ +G + QP ++NWA +++G++ + ++FVGDLSP+VTD L FS Y
Sbjct: 167 QNYSGSVMPNSDQPFRINWASFSTGEKRAVENGPDLSVFVGDLSPDVTDVLLHETFSDRY 226
Query: 166 PSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT-KGAGN 224
PS A+V+ D TGRS+G+GFV F ++ + A+ ++ G + +RQ+R AT K A
Sbjct: 227 PSVKSAKVVIDSNTGRSKGYGFVRFGDENERSRALTEMNGAYCSNRQMRVGIATPKRAIA 286
Query: 225 NEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFH 284
N+ + SS A V L G +G +++ + T++VG + P+V DL + F
Sbjct: 287 NQQQHSSQA---VILAGGHGSNGSMGYGSQS-DGESTNATIFVGGIDPDVIDEDLRQPFS 342
Query: 285 SLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQ-MKCSWGSKP 341
G V V++ KG GFV+++ A AI+ N T + GK ++ SWG P
Sbjct: 343 QFGEVV--SVKIPVGKGCGFVQFADRKSAEDAIESLNGT----VIGKNTVRLSWGRSP 394
Score = 42.4 bits (98), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 47/86 (54%), Gaps = 4/86 (4%)
Query: 54 STCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKL-IRKDKSSYGFIHYFDRRSAAMAIL 112
ST +++VG I V + L++ FS G V K+ + K GF+ + DR+SA AI
Sbjct: 318 STNATIFVGGIDPDVIDEDLRQPFSQFGEVVSVKIPVGK---GCGFVQFADRKSAEDAIE 374
Query: 113 SLNGRHLFGQPIKVNWAYASGQREDT 138
SLNG + ++++W + +++ T
Sbjct: 375 SLNGTVIGKNTVRLSWGRSPNKQDLT 400
>gi|350589206|ref|XP_003482814.1| PREDICTED: nucleolysin TIAR-like [Sus scrofa]
Length = 320
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 86/232 (37%), Positives = 134/232 (57%), Gaps = 23/232 (9%)
Query: 114 LNGRHLFGQPIKVNWAYA-SGQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCS--- 169
+NGR + G+ ++VNWA S Q++DTS HF++FVGDLSPE+T + + F+ + S
Sbjct: 4 MNGRKILGKEVRVNWATTPSSQKKDTSNHFHVFVGDLSPEITAEDIKSAFTSFGKISIAM 63
Query: 170 DARVMWDQKTGRSRGFGFVS-FRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDK 228
DARV+ D TG+S+G+G VS F N+ DA++AI + G+WLG RQI+ +WAT+ +
Sbjct: 64 DARVVKDMATGKSKGYGSVSFFYNKLDAENAIVRMGGQWLGGRQIKTSWATRKPPAPKST 123
Query: 229 QSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGA 288
Q ++ K + ++ N + +N TVY G +A +T + + F G
Sbjct: 124 QENNTKQL---------KFEDVVNQSSSKN----CTVYCGGIASGLTDQLMRQTFSPFGQ 170
Query: 289 GVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSK 340
I E+RV +K + FVR+STH AA AI + + + G+ +KC WG +
Sbjct: 171 --IMEIRVFPEKRYSFVRFSTHGSAAHAIV---SVTGTTIEGRVVKCYWGKE 217
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 85/194 (43%), Gaps = 33/194 (17%)
Query: 52 DPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIR--KDKSS-----YGFIHYF-D 103
D S V+VG++ ++T ++ F+S G + R KD ++ YG + +F +
Sbjct: 28 DTSNHFHVFVGDLSPEITAEDIKSAFTSFGKISIAMDARVVKDMATGKSKGYGSVSFFYN 87
Query: 104 RRSAAMAILSLNGRHLFGQPIKVNWAY------ASGQREDT-------------SGHFNI 144
+ A AI+ + G+ L G+ IK +WA S Q +T S + +
Sbjct: 88 KLDAENAIVRMGGQWLGGRQIKTSWATRKPPAPKSTQENNTKQLKFEDVVNQSSSKNCTV 147
Query: 145 FVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLT 204
+ G ++ +TD + FS + + RV +++ + FV F A AI +T
Sbjct: 148 YCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKR------YSFVRFSTHGSAAHAIVSVT 201
Query: 205 GKWLGSRQIRCNWA 218
G + R ++C W
Sbjct: 202 GTTIEGRVVKCYWG 215
Score = 42.0 bits (97), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 41/75 (54%), Gaps = 2/75 (2%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSSYGFIHYFDRRSAAMAILSLNGR 117
+VY G I + +T+ L+++ FS G + ++ + + Y F+ + SAA AI+S+ G
Sbjct: 146 TVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKR--YSFVRFSTHGSAAHAIVSVTGT 203
Query: 118 HLFGQPIKVNWAYAS 132
+ G+ +K W S
Sbjct: 204 TIEGRVVKCYWGKES 218
>gi|449446975|ref|XP_004141245.1| PREDICTED: polyadenylate-binding protein RBP47C-like [Cucumis
sativus]
gi|449498692|ref|XP_004160607.1| PREDICTED: polyadenylate-binding protein RBP47C-like [Cucumis
sativus]
Length = 426
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 96/298 (32%), Positives = 155/298 (52%), Gaps = 23/298 (7%)
Query: 54 STCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS----YGFIHYFDRRSAAM 109
S ++++VG++H + E L FSS G + K+IR ++ YGF+ + +A
Sbjct: 81 SENKTIWVGDLHHWMDESYLHSCFSSVGEISSMKVIRNKQTGLSEGYGFVEFLSHTTAEK 140
Query: 110 AILSLNGRHL--FGQPIKVNWA-YASG-QREDTSGHFNIFVGDLSPEVTDATLFACFSV- 164
+ + +G + Q ++NWA +++G +R D +IFVGDL+ +VTD+ L+ FS
Sbjct: 141 VLQNYSGMFMPSTEQTFRLNWATFSTGDKRSDNDPDLSIFVGDLAADVTDSLLYETFSSK 200
Query: 165 YPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGN 224
+PS A+V+ D TGRS+G+GFV F + + A+ ++ G + SR +R AT +
Sbjct: 201 FPSVKAAKVVIDANTGRSKGYGFVRFGDDNERSQAMTEMNGIYCSSRPMRIGAATPRKSS 260
Query: 225 NEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFH 284
+Q S TNG G ++ E + TT++VG L P VT DL + F
Sbjct: 261 GYQQQHSSQGGGYS-TNGYFSQGLQS------EGDSANTTIFVGGLDPNVTDEDLRQPFS 313
Query: 285 SLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQ-MKCSWGSKP 341
G I V++ KG GFV+++ +A A+Q N T + GKQ ++ SWG P
Sbjct: 314 QYGE--IVSVKIPVGKGCGFVQFANRNDAEEALQKLNGT----VIGKQTVRLSWGRNP 365
>gi|297834824|ref|XP_002885294.1| RNA-binding protein 47B [Arabidopsis lyrata subsp. lyrata]
gi|297331134|gb|EFH61553.1| RNA-binding protein 47B [Arabidopsis lyrata subsp. lyrata]
Length = 435
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 101/306 (33%), Positives = 160/306 (52%), Gaps = 36/306 (11%)
Query: 56 CRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS----YGFIHYFDRRSAAMAI 111
++++VG++ + E L FS TG V K+IR +S YGFI + R +A +
Sbjct: 107 VKTLWVGDLLHWMDETYLHSCFSHTGEVSSVKVIRNKLTSQSEGYGFIEFLSRAAAEEVL 166
Query: 112 LSLNGRHL--FGQPIKVNWA-YASGQRE--DTSGHFNIFVGDLSPEVTDATLFACF-SVY 165
+ +G + QP ++NWA +++G++ + +IFVGDLSP+VTDA L F Y
Sbjct: 167 QNYSGSLMPNSDQPFRINWASFSTGEKRAVENGPDLSIFVGDLSPDVTDALLHETFFDRY 226
Query: 166 PSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT-KGAGN 224
PS A+V+ D TGRS+G+GFV F ++ + A+ ++ G + +RQ+R AT K A
Sbjct: 227 PSVKSAKVVIDSNTGRSKGYGFVRFGDENERSRALTEMNGAYCSNRQMRVGVATPKRAIA 286
Query: 225 NEDKQSSDAKSVV-------ELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQL 277
N+ + SS A + + +GS DG E+TN T++VG + +VT
Sbjct: 287 NQQQHSSQALILAGGHGANGSMAHGSQSDG-ESTN----------ATIFVGGIDADVTDE 335
Query: 278 DLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQ-MKCS 336
DL + F G + V++ KG GFV+++ A AI+ N T + GK ++ S
Sbjct: 336 DLRQPFSQFGE--VVSVKIPVGKGCGFVQFAERKSAEDAIETLNGT----VIGKNTVRLS 389
Query: 337 WGSKPT 342
WG P
Sbjct: 390 WGRSPN 395
>gi|452819166|gb|EME26242.1| oligouridylate-binding protein, putative [Galdieria sulphuraria]
gi|452825749|gb|EME32744.1| oligouridylate-binding protein, putative [Galdieria sulphuraria]
Length = 309
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 93/302 (30%), Positives = 157/302 (51%), Gaps = 32/302 (10%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS-----YGFIHYFDRRSAAMAIL 112
S+YVGN+ +V LLQE+F GPV+ K++ D+++ +GF+ ++DR +A A+
Sbjct: 14 SLYVGNLDPRVCTELLQEIFELIGPVKLAKVV-GDRNTGRSLGFGFVDFYDRPTAIRAME 72
Query: 113 SLNGRHLFGQPIKVNWAYASG-------QREDTSGHFNIFVGDLSPEVTDATLFACFSVY 165
++GR ++GQ I+++WA+A Q ED + IFVG+L P+V + L FS +
Sbjct: 73 LMHGRRVYGQEIRIDWAHAGAGAAGRILQDEDLANMHTIFVGNLGPDVDEEKLMKAFSSF 132
Query: 166 PSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNN 225
S + A++ D +TG G+GFVSFR ++DA A+ +TG L R +R +WA
Sbjct: 133 SSVAGAKISKDVETGLPAGYGFVSFREKKDADLAMQTMTGYILSGRALRIDWA------- 185
Query: 226 EDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHS 285
K ++ S + S+ K T + +P +VYV L ++ + F
Sbjct: 186 RGKNAARGVSTFGSFSSSTVTPKPDIQTIMKQTDPLNVSVYVRGLPSDIDVAAIRESFR- 244
Query: 286 LGAGVIEEVRV-------QRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWG 338
G G IE+V++ +D+ + FV++ +H AA AI + + G ++C WG
Sbjct: 245 -GFGDIEDVKIPDAARMTAQDRIYAFVKFKSHEVAARAI---HDMHGKEIAGCVVQCEWG 300
Query: 339 SK 340
+
Sbjct: 301 RE 302
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/201 (22%), Positives = 90/201 (44%), Gaps = 32/201 (15%)
Query: 52 DPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS-----YGFIHYFDRRS 106
D + +++VGN+ V E L + FSS V G K I KD + YGF+ + +++
Sbjct: 104 DLANMHTIFVGNLGPDVDEEKLMKAFSSFSSVAGAK-ISKDVETGLPAGYGFVSFREKKD 162
Query: 107 AAMAILSLNGRHLFGQPIKVNWAYASG-------------------------QREDTSGH 141
A +A+ ++ G L G+ ++++WA ++ +
Sbjct: 163 ADLAMQTMTGYILSGRALRIDWARGKNAARGVSTFGSFSSSTVTPKPDIQTIMKQTDPLN 222
Query: 142 FNIFVGDLSPEVTDATLFACFSVYPSCSDARV-MWDQKTGRSRGFGFVSFRNQQDAQSAI 200
+++V L ++ A + F + D ++ + T + R + FV F++ + A AI
Sbjct: 223 VSVYVRGLPSDIDVAAIRESFRGFGDIEDVKIPDAARMTAQDRIYAFVKFKSHEVAARAI 282
Query: 201 NDLTGKWLGSRQIRCNWATKG 221
+D+ GK + ++C W +G
Sbjct: 283 HDMHGKEIAGCVVQCEWGREG 303
>gi|15230291|ref|NP_188544.1| RNA-binding protein 47B [Arabidopsis thaliana]
gi|122246579|sp|Q0WW84.1|RB47B_ARATH RecName: Full=Polyadenylate-binding protein RBP47B;
Short=Poly(A)-binding protein RBP47B; AltName:
Full=RNA-binding protein 47B; Short=AtRBP47B
gi|110741040|dbj|BAE98614.1| putative nuclear acid binding protein [Arabidopsis thaliana]
gi|111074446|gb|ABH04596.1| At3g19130 [Arabidopsis thaliana]
gi|332642675|gb|AEE76196.1| RNA-binding protein 47B [Arabidopsis thaliana]
Length = 435
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 96/299 (32%), Positives = 158/299 (52%), Gaps = 22/299 (7%)
Query: 56 CRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS----YGFIHYFDRRSAAMAI 111
++++VG++ + E L FS TG V K+IR +S YGF+ + R +A +
Sbjct: 107 VKTLWVGDLLHWMDETYLHSCFSHTGEVSSVKVIRNKLTSQSEGYGFVEFLSRAAAEEVL 166
Query: 112 LSLNGRHL--FGQPIKVNWA-YASGQRE--DTSGHFNIFVGDLSPEVTDATLFACFS-VY 165
+ +G + QP ++NWA +++G++ + ++FVGDLSP+VTD L FS Y
Sbjct: 167 QNYSGSVMPNSDQPFRINWASFSTGEKRAVENGPDLSVFVGDLSPDVTDVLLHETFSDRY 226
Query: 166 PSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT-KGAGN 224
PS A+V+ D TGRS+G+GFV F ++ + A+ ++ G + +RQ+R AT K A
Sbjct: 227 PSVKSAKVVIDSNTGRSKGYGFVRFGDENERSRALTEMNGAYCSNRQMRVGIATPKRAIA 286
Query: 225 NEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFH 284
N+ + SS A V L G +G +++ + T++VG + P+V DL + F
Sbjct: 287 NQQQHSSQA---VILAGGHGSNGSMGYGSQS-DGESTNATIFVGGIDPDVIDEDLRQPFS 342
Query: 285 SLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQ-MKCSWGSKPT 342
G + V++ KG GFV+++ A AI+ N T + GK ++ SWG P
Sbjct: 343 QFGE--VVSVKIPVGKGCGFVQFADRKSAEDAIESLNGT----VIGKNTVRLSWGRSPN 395
>gi|21618243|gb|AAM67293.1| nuclear acid binding protein, putative [Arabidopsis thaliana]
Length = 392
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 96/299 (32%), Positives = 158/299 (52%), Gaps = 22/299 (7%)
Query: 56 CRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS----YGFIHYFDRRSAAMAI 111
++++VG++ + E L FS TG V K+IR +S YGF+ + R +A +
Sbjct: 64 VKTLWVGDLLHWMDETYLHSCFSHTGEVSSVKVIRNKLTSQSEGYGFVEFLSRAAAEEVL 123
Query: 112 LSLNGRHL--FGQPIKVNWA-YASGQRE--DTSGHFNIFVGDLSPEVTDATLFACFS-VY 165
+ +G + QP ++NWA +++G++ + ++FVGDLSP+VTD L FS Y
Sbjct: 124 QNYSGSVMPNSDQPFRINWASFSTGEKRAVENGPDLSVFVGDLSPDVTDVLLHETFSDRY 183
Query: 166 PSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT-KGAGN 224
PS A+V+ D TGRS+G+GFV F ++ + A+ ++ G + +RQ+R AT K A
Sbjct: 184 PSVKSAKVVIDSNTGRSKGYGFVRFGDENERSRALTEMNGAYCSNRQMRVGIATPKRAIA 243
Query: 225 NEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFH 284
N+ + SS A V L G +G +++ + T++VG + P+V DL + F
Sbjct: 244 NQQQHSSQA---VILAGGHGSNGSMGYGSQS-DGESTNATIFVGGIDPDVIDEDLRQPFS 299
Query: 285 SLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQ-MKCSWGSKPT 342
G + V++ KG GFV+++ A AI+ N T + GK ++ SWG P
Sbjct: 300 QFGE--VVSVKIPVGKGCGFVQFADRKSAEDAIESLNGT----VIGKNTVRLSWGRSPN 352
>gi|356562301|ref|XP_003549410.1| PREDICTED: RNA-binding post-transcriptional regulator csx1-like
[Glycine max]
Length = 401
Score = 141 bits (356), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 95/295 (32%), Positives = 153/295 (51%), Gaps = 33/295 (11%)
Query: 57 RSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS----YGFIHYFDRRSAAMAIL 112
+++++G++H + E L F+STG + K+IR ++ YGF+ ++ +A +
Sbjct: 73 KTIWIGDLHHWMDENYLHRCFASTGEISSIKVIRNKQTGLSEGYGFVEFYSHATAEKVLQ 132
Query: 113 SLNGRHLFG--QPIKVNWA-YASGQR-EDTSGHFNIFVGDLSPEVTDATLFACF-SVYPS 167
+ G + QP ++NWA +++G + D +IFVGDL+ +VTD+ L F SVYPS
Sbjct: 133 NYAGILMPNAEQPFRLNWATFSTGDKGSDNVPDLSIFVGDLAADVTDSLLHETFASVYPS 192
Query: 168 CSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNED 227
A+V++D TGRS+G+GFV F + + A+ + G + SR +R AT
Sbjct: 193 VKAAKVVFDANTGRSKGYGFVRFGDDNERTQAMTQMNGVYCSSRPMRIGAAT-------- 244
Query: 228 KQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLG 287
+ S L+NG++ +EA N TT++VG L P V+ DL + F G
Sbjct: 245 PRKSSGHQQGGLSNGTA------NQSEADSTN---TTIFVGGLDPNVSDEDLRQPFSQYG 295
Query: 288 AGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQ-MKCSWGSKP 341
I V++ KG GFV+++ A A+Q N T GKQ ++ SWG P
Sbjct: 296 E--IVSVKIPVGKGCGFVQFANRNNAEEALQKLNGT----TIGKQTVRLSWGRNP 344
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 84/185 (45%), Gaps = 26/185 (14%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGP-VEGCKLIRKDKSS----YGFIHYFDRRSAAMAIL 112
S++VG++ VT+ LL E F+S P V+ K++ + YGF+ + D A+
Sbjct: 167 SIFVGDLAADVTDSLLHETFASVYPSVKAAKVVFDANTGRSKGYGFVRFGDDNERTQAMT 226
Query: 113 SLNGRHLFGQPIKVNWAY---------------ASGQREDTSGHFNIFVGDLSPEVTDAT 157
+NG + +P+++ A + Q E S + IFVG L P V+D
Sbjct: 227 QMNGVYCSSRPMRIGAATPRKSSGHQQGGLSNGTANQSEADSTNTTIFVGGLDPNVSDED 286
Query: 158 LFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNW 217
L FS Y ++ +G GFV F N+ +A+ A+ L G +G + +R +W
Sbjct: 287 LRQPFSQYGEIVSVKIP------VGKGCGFVQFANRNNAEEALQKLNGTTIGKQTVRLSW 340
Query: 218 ATKGA 222
A
Sbjct: 341 GRNPA 345
>gi|224137382|ref|XP_002327112.1| predicted protein [Populus trichocarpa]
gi|222835427|gb|EEE73862.1| predicted protein [Populus trichocarpa]
Length = 429
Score = 141 bits (356), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 96/295 (32%), Positives = 156/295 (52%), Gaps = 28/295 (9%)
Query: 57 RSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS----YGFIHYFDRRSAAMAIL 112
+++++G++H + E L F STG + K+IR ++ YGF+ + +A +
Sbjct: 93 KTIWIGDLHHWMDENYLHSCFVSTGEIASIKVIRNKQTGLSEGYGFVEFLTHATAEKVLQ 152
Query: 113 SLNGRHL--FGQPIKVNWA-YASG-QREDTSGHFNIFVGDLSPEVTDATLFACF-SVYPS 167
+ G + QP ++NWA +++G +R D + +IFVGDL+ +VTD+ L F S YPS
Sbjct: 153 NYGGILMPNTEQPFRLNWATFSTGDKRSDNAPDLSIFVGDLAADVTDSLLQETFVSKYPS 212
Query: 168 CSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNED 227
A+V++D TGRS+G+GFV F + + A+ ++ G + SR +R AT +
Sbjct: 213 VKAAKVVFDANTGRSKGYGFVRFGDDSERTQAMTEMNGVYCSSRPMRIGAATPRKSSGYQ 272
Query: 228 KQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLG 287
+Q +NG+S G + ++ NN TT++VG L P VT DL + F G
Sbjct: 273 QQGGYG------SNGASAQGFQ---SDGDSNN---TTIFVGGLDPNVTDEDLKQPFSQYG 320
Query: 288 AGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQ-MKCSWGSKP 341
I V++ KG GFV+++ A A+Q N T + GKQ ++ SWG P
Sbjct: 321 E--IVSVKIPVGKGCGFVQFANRDNAEEALQKLNGT----VIGKQTVRLSWGRNP 369
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 85/191 (44%), Gaps = 37/191 (19%)
Query: 134 QREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQ 193
QRE + + I++GDL + + L +CF + +V+ +++TG S G+GFV F
Sbjct: 85 QREGSGENKTIWIGDLHHWMDENYLHSCFVSTGEIASIKVIRNKQTGLSEGYGFVEFLTH 144
Query: 194 QDAQSAINDLTGKWLGSRQ--IRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETT 251
A+ + + G + + + R NWAT G DK+S +A +
Sbjct: 145 ATAEKVLQNYGGILMPNTEQPFRLNWATFSTG---DKRSDNAPDL--------------- 186
Query: 252 NTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHS-----LGAGVIEEVRVQRDKGFGFVR 306
+++VG+LA +VT L F S A V+ + R KG+GFVR
Sbjct: 187 ------------SIFVGDLAADVTDSLLQETFVSKYPSVKAAKVVFDANTGRSKGYGFVR 234
Query: 307 YSTHAEAALAI 317
+ +E A+
Sbjct: 235 FGDDSERTQAM 245
>gi|323335711|gb|EGA76992.1| Pub1p [Saccharomyces cerevisiae Vin13]
Length = 453
Score = 141 bits (355), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 68/170 (40%), Positives = 106/170 (62%), Gaps = 4/170 (2%)
Query: 54 STCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLI--RKDKS-SYGFIHYFDRRSAAMA 110
++ R +YVGN+ +TE +L++ F GP+ K++ + +K+ +Y F+ Y A +A
Sbjct: 72 TSDRVLYVGNLDKAITEDILKQYFQVGGPIANIKIMIDKNNKNVNYAFVEYHQSHDANIA 131
Query: 111 ILSLNGRHLFGQPIKVNWAYASGQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSD 170
+ +LNG+ + +K+NWA+ S Q+ + FN+FVGDL+ V D TL F +PS
Sbjct: 132 LQTLNGKQIENNIVKINWAFQS-QQSSSDDTFNLFVGDLNVNVDDETLRNAFKDFPSYLS 190
Query: 171 ARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATK 220
VMWD +TG SRG+GFVSF +Q DAQ+A++ + G+ L R +R NWA K
Sbjct: 191 GHVMWDMQTGSSRGYGFVSFTSQDDAQNAMDSMQGQDLNGRPLRINWAAK 240
Score = 45.4 bits (106), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 44/82 (53%), Gaps = 7/82 (8%)
Query: 260 PQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQM 319
P+ TT Y+GN+ T+ DL F + G I + + +KG F++Y TH +AA+ I
Sbjct: 338 PRVTTAYIGNIPHFATEADLIPLFQNF--GFILDFKHYPEKGCCFIKYDTHEQAAVCI-- 393
Query: 320 GNTTQSSYLF-GKQMKCSWGSK 340
+++ F G+ ++ WG +
Sbjct: 394 --VALANFPFQGRNLRTGWGKE 413
>gi|349580919|dbj|GAA26078.1| K7_Pub1p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 453
Score = 141 bits (355), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 68/170 (40%), Positives = 106/170 (62%), Gaps = 4/170 (2%)
Query: 54 STCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLI--RKDKS-SYGFIHYFDRRSAAMA 110
++ R +YVGN+ +TE +L++ F GP+ K++ + +K+ +Y F+ Y A +A
Sbjct: 72 TSDRVLYVGNLDKAITEDILKQYFQVGGPIANIKIMIDKNNKNVNYAFVEYHQSHDANIA 131
Query: 111 ILSLNGRHLFGQPIKVNWAYASGQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSD 170
+ +LNG+ + +K+NWA+ S Q+ + FN+FVGDL+ V D TL F +PS
Sbjct: 132 LQTLNGKQIENNIVKINWAFQS-QQSSSDDTFNLFVGDLNVNVDDETLRNAFKDFPSYLS 190
Query: 171 ARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATK 220
VMWD +TG SRG+GFVSF +Q DAQ+A++ + G+ L R +R NWA K
Sbjct: 191 GHVMWDMQTGSSRGYGFVSFTSQDDAQNAMDSMQGQDLNGRPLRINWAAK 240
Score = 45.4 bits (106), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 44/82 (53%), Gaps = 7/82 (8%)
Query: 260 PQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQM 319
P+ TT Y+GN+ T+ DL F + G I + + +KG F++Y TH +AA+ I
Sbjct: 338 PRVTTAYIGNIPHFATEADLIPLFQNF--GFILDFKHYPEKGCCFIKYDTHEQAAVCI-- 393
Query: 320 GNTTQSSYLF-GKQMKCSWGSK 340
+++ F G+ ++ WG +
Sbjct: 394 --VALANFPFQGRNLRTGWGKE 413
>gi|6324312|ref|NP_014382.1| Pub1p [Saccharomyces cerevisiae S288c]
gi|308153665|sp|P32588.4|PUB1_YEAST RecName: Full=Nuclear and cytoplasmic polyadenylated RNA-binding
protein PUB1; AltName: Full=ARS consensus-binding
protein ACBP-60; AltName: Full=Poly uridylate-binding
protein; Short=Poly(U)-binding protein
gi|1301841|emb|CAA95877.1| PUB1 [Saccharomyces cerevisiae]
gi|285814634|tpg|DAA10528.1| TPA: Pub1p [Saccharomyces cerevisiae S288c]
gi|392296972|gb|EIW08073.1| Pub1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 453
Score = 141 bits (355), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 68/170 (40%), Positives = 106/170 (62%), Gaps = 4/170 (2%)
Query: 54 STCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLI--RKDKS-SYGFIHYFDRRSAAMA 110
++ R +YVGN+ +TE +L++ F GP+ K++ + +K+ +Y F+ Y A +A
Sbjct: 72 TSDRVLYVGNLDKAITEDILKQYFQVGGPIANIKIMIDKNNKNVNYAFVEYHQSHDANIA 131
Query: 111 ILSLNGRHLFGQPIKVNWAYASGQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSD 170
+ +LNG+ + +K+NWA+ S Q+ + FN+FVGDL+ V D TL F +PS
Sbjct: 132 LQTLNGKQIENNIVKINWAFQS-QQSSSDDTFNLFVGDLNVNVDDETLRNAFKDFPSYLS 190
Query: 171 ARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATK 220
VMWD +TG SRG+GFVSF +Q DAQ+A++ + G+ L R +R NWA K
Sbjct: 191 GHVMWDMQTGSSRGYGFVSFTSQDDAQNAMDSMQGQDLNGRPLRINWAAK 240
Score = 45.1 bits (105), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 44/82 (53%), Gaps = 7/82 (8%)
Query: 260 PQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQM 319
P+ TT Y+GN+ T+ DL F + G I + + +KG F++Y TH +AA+ I
Sbjct: 338 PRVTTAYIGNIPHFATEADLIPLFQNF--GFILDFKHYPEKGCCFIKYDTHEQAAVCI-- 393
Query: 320 GNTTQSSYLF-GKQMKCSWGSK 340
+++ F G+ ++ WG +
Sbjct: 394 --VALANFPFQGRNLRTGWGKE 413
>gi|295646|gb|AAC37348.1| RNA-binding protein [Saccharomyces cerevisiae]
gi|311124|gb|AAC37364.1| poly(A)-binding protein [Saccharomyces cerevisiae]
gi|151944515|gb|EDN62793.1| poly(A) binding protein [Saccharomyces cerevisiae YJM789]
gi|190409011|gb|EDV12276.1| poly(A) binding protein [Saccharomyces cerevisiae RM11-1a]
gi|207341619|gb|EDZ69624.1| YNL016Wp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|256274171|gb|EEU09080.1| Pub1p [Saccharomyces cerevisiae JAY291]
gi|259148933|emb|CAY82177.1| Pub1p [Saccharomyces cerevisiae EC1118]
gi|323346726|gb|EGA81007.1| Pub1p [Saccharomyces cerevisiae Lalvin QA23]
gi|323352444|gb|EGA84945.1| Pub1p [Saccharomyces cerevisiae VL3]
Length = 453
Score = 141 bits (355), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 68/170 (40%), Positives = 106/170 (62%), Gaps = 4/170 (2%)
Query: 54 STCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLI--RKDKS-SYGFIHYFDRRSAAMA 110
++ R +YVGN+ +TE +L++ F GP+ K++ + +K+ +Y F+ Y A +A
Sbjct: 72 TSDRVLYVGNLDKAITEDILKQYFQVGGPIANIKIMIDKNNKNVNYAFVEYHQSHDANIA 131
Query: 111 ILSLNGRHLFGQPIKVNWAYASGQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSD 170
+ +LNG+ + +K+NWA+ S Q+ + FN+FVGDL+ V D TL F +PS
Sbjct: 132 LQTLNGKQIENNIVKINWAFQS-QQSSSDDTFNLFVGDLNVNVDDETLRNAFKDFPSYLS 190
Query: 171 ARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATK 220
VMWD +TG SRG+GFVSF +Q DAQ+A++ + G+ L R +R NWA K
Sbjct: 191 GHVMWDMQTGSSRGYGFVSFTSQDDAQNAMDSMQGQDLNGRPLRINWAAK 240
Score = 45.1 bits (105), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 44/82 (53%), Gaps = 7/82 (8%)
Query: 260 PQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQM 319
P+ TT Y+GN+ T+ DL F + G I + + +KG F++Y TH +AA+ I
Sbjct: 338 PRVTTAYIGNIPHFATEADLIPLFQNF--GFILDFKHYPEKGCCFIKYDTHEQAAVCI-- 393
Query: 320 GNTTQSSYLF-GKQMKCSWGSK 340
+++ F G+ ++ WG +
Sbjct: 394 --VALANFPFQGRNLRTGWGKE 413
>gi|323303187|gb|EGA56986.1| Pub1p [Saccharomyces cerevisiae FostersB]
Length = 433
Score = 141 bits (355), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 68/170 (40%), Positives = 106/170 (62%), Gaps = 4/170 (2%)
Query: 54 STCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLI--RKDKS-SYGFIHYFDRRSAAMA 110
++ R +YVGN+ +TE +L++ F GP+ K++ + +K+ +Y F+ Y A +A
Sbjct: 73 TSDRVLYVGNLDKAITEDILKQYFQVGGPIANIKIMIDKNNKNVNYAFVEYHQSHDANIA 132
Query: 111 ILSLNGRHLFGQPIKVNWAYASGQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSD 170
+ +LNG+ + +K+NWA+ S Q+ + FN+FVGDL+ V D TL F +PS
Sbjct: 133 LQTLNGKQIENNIVKINWAFQS-QQSSSDDTFNLFVGDLNVNVDDETLRNAFKDFPSYLS 191
Query: 171 ARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATK 220
VMWD +TG SRG+GFVSF +Q DAQ+A++ + G+ L R +R NWA K
Sbjct: 192 GHVMWDMQTGSSRGYGFVSFTSQDDAQNAMDSMQGQDLNGRPLRINWAAK 241
Score = 45.1 bits (105), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 44/82 (53%), Gaps = 7/82 (8%)
Query: 260 PQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQM 319
P+ TT Y+GN+ T+ DL F + G I + + +KG F++Y TH +AA+ I
Sbjct: 339 PRVTTAYIGNIPHFATEADLIPLFQNF--GFILDFKHYPEKGCCFIKYDTHEQAAVCI-- 394
Query: 320 GNTTQSSYLF-GKQMKCSWGSK 340
+++ F G+ ++ WG +
Sbjct: 395 --VALANFPFQGRNLRTGWGKE 414
>gi|172438|gb|AAA02808.1| RNA-binding protein [Saccharomyces cerevisiae]
Length = 429
Score = 141 bits (355), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 68/170 (40%), Positives = 106/170 (62%), Gaps = 4/170 (2%)
Query: 54 STCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLI--RKDKS-SYGFIHYFDRRSAAMA 110
++ R +YVGN+ +TE +L++ F GP+ K++ + +K+ +Y F+ Y A +A
Sbjct: 72 TSDRVLYVGNLDKAITEDILKQYFQVGGPIANIKIMIDKNNKNVNYAFVEYHQSHDANIA 131
Query: 111 ILSLNGRHLFGQPIKVNWAYASGQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSD 170
+ +LNG+ + +K+NWA+ S Q+ + FN+FVGDL+ V D TL F +PS
Sbjct: 132 LQTLNGKQIENNIVKINWAFQS-QQSSSDDTFNLFVGDLNVNVDDETLRNAFKDFPSYLS 190
Query: 171 ARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATK 220
VMWD +TG SRG+GFVSF +Q DAQ+A++ + G+ L R +R NWA K
Sbjct: 191 GHVMWDMQTGSSRGYGFVSFTSQDDAQNAMDSMQGQDLNGRPLRINWAAK 240
Score = 45.1 bits (105), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 44/82 (53%), Gaps = 7/82 (8%)
Query: 260 PQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQM 319
P+ TT Y+GN+ T+ DL F + G I + + +KG F++Y TH +AA+ I
Sbjct: 338 PRVTTAYIGNIPHFATEADLIPLFQNF--GFILDFKHYPEKGCCFIKYDTHEQAAVCI-- 393
Query: 320 GNTTQSSYLF-GKQMKCSWGSK 340
+++ F G+ ++ WG +
Sbjct: 394 --VALANFPFQGRNLRTGWGKE 413
>gi|365758602|gb|EHN00436.1| Pub1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 455
Score = 140 bits (354), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 68/170 (40%), Positives = 106/170 (62%), Gaps = 4/170 (2%)
Query: 54 STCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLI--RKDKS-SYGFIHYFDRRSAAMA 110
++ R +YVGN+ +TE +L++ F GP+ K++ + +K+ +Y F+ Y A +A
Sbjct: 72 TSDRVLYVGNLDKAITEDILKQYFQVGGPIANIKIMIDKNNKNVNYAFVEYHQSHDANIA 131
Query: 111 ILSLNGRHLFGQPIKVNWAYASGQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSD 170
+ +LNG+ + +K+NWA+ S Q+ + FN+FVGDL+ V D TL F +PS
Sbjct: 132 LQTLNGKQIENNIVKINWAFQS-QQSSSDDTFNLFVGDLNVNVDDETLRNAFKDFPSYLS 190
Query: 171 ARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATK 220
VMWD +TG SRG+GFVSF +Q DAQ+A++ + G+ L R +R NWA K
Sbjct: 191 GHVMWDMQTGSSRGYGFVSFTSQDDAQTAMDTMQGQDLNGRPLRINWAAK 240
Score = 45.1 bits (105), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 44/82 (53%), Gaps = 7/82 (8%)
Query: 260 PQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQM 319
P+ TT Y+GN+ T+ DL F + G I + + +KG F++Y TH +AA+ I
Sbjct: 344 PRVTTAYIGNIPHFATEADLIPLFQNF--GFILDFKHYPEKGCCFIKYDTHEQAAVCI-- 399
Query: 320 GNTTQSSYLF-GKQMKCSWGSK 340
+++ F G+ ++ WG +
Sbjct: 400 --VALANFPFQGRNLRTGWGKE 419
>gi|356552180|ref|XP_003544447.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
[Glycine max]
Length = 425
Score = 140 bits (354), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 97/297 (32%), Positives = 155/297 (52%), Gaps = 37/297 (12%)
Query: 57 RSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS----YGFIHYFDRRSAAMAIL 112
+++++G++H + E L F+STG + K+IR ++ YGF+ ++ +A +
Sbjct: 97 KTIWIGDLHHWMDENYLHRCFASTGEISSIKVIRNKQTGLSEGYGFVEFYSHATAEKVLQ 156
Query: 113 SLNGRHLFG--QPIKVNWA-YASGQR-EDTSGHFNIFVGDLSPEVTDATLFACF-SVYPS 167
+ G + QP ++NWA +++G + D +IFVGDL+ +VTD+ L F SVYPS
Sbjct: 157 NYAGILMPNTEQPFRLNWATFSTGDKGSDNVPDLSIFVGDLAADVTDSLLHETFASVYPS 216
Query: 168 CSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT--KGAGNN 225
A+V++D TGRS+G+GFV F + A+ + G + SR +R AT K +G+
Sbjct: 217 VKAAKVVFDANTGRSKGYGFVRFGDDNQRTQAMTQMNGVYCSSRPMRIGAATPRKSSGHQ 276
Query: 226 EDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHS 285
+ QS NG++ +EA N TT++VG L P V+ DL + F
Sbjct: 277 QGGQS----------NGTANQ------SEADSTN---TTIFVGGLDPNVSDEDLRQPFSQ 317
Query: 286 LGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQ-MKCSWGSKP 341
G I V++ KG GFV+++ A A+Q N T GKQ ++ SWG P
Sbjct: 318 YGE--IVSVKIPVGKGCGFVQFANRNNAEEALQKLNGTS----IGKQTVRLSWGRNP 368
>gi|365763380|gb|EHN04909.1| Pub1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 453
Score = 140 bits (354), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 68/170 (40%), Positives = 106/170 (62%), Gaps = 4/170 (2%)
Query: 54 STCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLI--RKDKS-SYGFIHYFDRRSAAMA 110
++ R +YVGN+ +TE +L++ F GP+ K++ + +K+ +Y F+ Y A +A
Sbjct: 72 TSDRVLYVGNLDKAITEDILKQYFQVGGPIANIKIMIDKNNKNVNYAFVEYHQSHDANIA 131
Query: 111 ILSLNGRHLFGQPIKVNWAYASGQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSD 170
+ +LNG+ + +K+NWA+ S Q+ + FN+FVGDL+ V D TL F +PS
Sbjct: 132 LQTLNGKQIENNIVKINWAFQS-QQSSSDDTFNLFVGDLNVNVDDETLRNAFKDFPSYLS 190
Query: 171 ARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATK 220
VMWD +TG SRG+GFVSF +Q DAQ+A++ + G+ L R +R NWA K
Sbjct: 191 GHVMWDMQTGSSRGYGFVSFTSQDDAQNAMDSMQGQDLNGRPLRINWAAK 240
Score = 45.4 bits (106), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 44/82 (53%), Gaps = 7/82 (8%)
Query: 260 PQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQM 319
P+ TT Y+GN+ T+ DL F + G I + + +KG F++Y TH +AA+ I
Sbjct: 338 PRVTTAYIGNIPHFATEADLIPLFQNF--GFILDFKHYPEKGCCFIKYDTHEQAAVCI-- 393
Query: 320 GNTTQSSYLF-GKQMKCSWGSK 340
+++ F G+ ++ WG +
Sbjct: 394 --VALANFPFQGRNLRTGWGKE 413
>gi|401838326|gb|EJT42016.1| PUB1-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 459
Score = 140 bits (354), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 68/170 (40%), Positives = 106/170 (62%), Gaps = 4/170 (2%)
Query: 54 STCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLI--RKDKS-SYGFIHYFDRRSAAMA 110
++ R +YVGN+ +TE +L++ F GP+ K++ + +K+ +Y F+ Y A +A
Sbjct: 72 TSDRVLYVGNLDKAITEDILKQYFQVGGPIANIKIMIDKNNKNVNYAFVEYHQSHDANIA 131
Query: 111 ILSLNGRHLFGQPIKVNWAYASGQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSD 170
+ +LNG+ + +K+NWA+ S Q+ + FN+FVGDL+ V D TL F +PS
Sbjct: 132 LQTLNGKQIENNIVKINWAFQS-QQSSSDDTFNLFVGDLNVNVDDETLRNAFKDFPSYLS 190
Query: 171 ARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATK 220
VMWD +TG SRG+GFVSF +Q DAQ+A++ + G+ L R +R NWA K
Sbjct: 191 GHVMWDMQTGSSRGYGFVSFTSQDDAQTAMDTMQGQDLNGRPLRINWAAK 240
Score = 45.1 bits (105), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 44/82 (53%), Gaps = 7/82 (8%)
Query: 260 PQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQM 319
P+ TT Y+GN+ T+ DL F + G I + + +KG F++Y TH +AA+ I
Sbjct: 344 PRVTTAYIGNIPHFATEADLIPLFQNF--GFILDFKHYPEKGCCFIKYDTHEQAAVCI-- 399
Query: 320 GNTTQSSYLF-GKQMKCSWGSK 340
+++ F G+ ++ WG +
Sbjct: 400 --VALANFPFQGRNLRTGWGKE 419
>gi|1899188|gb|AAC49850.1| DNA binding protein ACBF [Nicotiana tabacum]
Length = 428
Score = 140 bits (354), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 95/292 (32%), Positives = 159/292 (54%), Gaps = 20/292 (6%)
Query: 57 RSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS----YGFIHYFDRRSAAMAIL 112
+++++G++ + E L FS G V K+IR ++ YGF+ + +A +
Sbjct: 84 KTIWIGDLQQWMDESYLHSCFSQAGEVISVKIIRNKQTGQSERYGFVEFNTHAAAEKVLQ 143
Query: 113 SLNGRHL--FGQPIKVNWA-YASGQ-REDTSGHFNIFVGDLSPEVTDATLFACF-SVYPS 167
S NG + QP ++NWA +++G+ R +T F+IFVGDL+ +VTD L F S YPS
Sbjct: 144 SYNGTMMPNAEQPFRLNWAGFSTGEKRAETGSDFSIFVGDLASDVTDTMLRDTFASRYPS 203
Query: 168 CSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNED 227
A+V+ D TG S+G+GFV F ++ + A+ ++ G + SR +R AT + +
Sbjct: 204 LKGAKVVVDANTGHSKGYGFVRFGDESERSRAMTEMNGVYCSSRAMRIGVATPKKPSAQQ 263
Query: 228 KQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLG 287
+ SS A V L+ G + +G T +++ + + TT++VG L +VT +L + F+ G
Sbjct: 264 QYSSQA---VILSGGYASNGAATHGSQS-DGDASNTTIFVGGLDSDVTDEELRQSFNQFG 319
Query: 288 AGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQ-MKCSWG 338
+ V++ KG GFV++S + A AIQ S + GKQ ++ SWG
Sbjct: 320 E--VVSVKIPAGKGCGFVQFSDRSSAQEAIQ----KLSGAIIGKQAVRLSWG 365
Score = 41.6 bits (96), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 46/88 (52%), Gaps = 4/88 (4%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSSYGFIHYFDRRSAAMAILSLNGR 117
+++VG + + VT+ L++ F+ G V K+ GF+ + DR SA AI L+G
Sbjct: 296 TIFVGGLDSDVTDEELRQSFNQFGEVVSVKI--PAGKGCGFVQFSDRSSAQEAIQKLSGA 353
Query: 118 HLFGQPIKVNWAYASGQ--REDTSGHFN 143
+ Q ++++W + + R D+ +N
Sbjct: 354 IIGKQAVRLSWGRTANKQMRADSGSQWN 381
>gi|145334517|ref|NP_001078604.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|332005307|gb|AED92690.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 421
Score = 140 bits (354), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 108/370 (29%), Positives = 173/370 (46%), Gaps = 24/370 (6%)
Query: 56 CRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS----YGFIHYFDRRSAAMAI 111
R++++G++ V E L FS TG + K+IR + YGFI + +A +
Sbjct: 23 VRTLWIGDLQYWVDENYLTSCFSQTGELVSVKVIRNKITGQPEGYGFIEFISHAAAERTL 82
Query: 112 LSLNGRHLFGQPI--KVNWA-YASGQREDTSGHFNIFVGDLSPEVTDATLFACFSV-YPS 167
+ NG + G + ++NWA + SGQ+ D +IFVGDL+P+VTD L F V Y S
Sbjct: 83 QTYNGTQMPGTELTFRLNWASFGSGQKVDAGPDHSIFVGDLAPDVTDYLLQETFRVHYSS 142
Query: 168 CSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNED 227
A+V+ D TGRS+G+GFV F + + A+ ++ G + +R +R + AT
Sbjct: 143 VRGAKVVTDPSTGRSKGYGFVKFAEESERNRAMAEMNGLYCSTRPMRISAATPKKNVGVQ 202
Query: 228 KQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLG 287
+Q V ++T S+ PE++ TT+ V NL VT+ +L + F LG
Sbjct: 203 QQ-----YVTKVTVPSAVAAPVQAYVAPPESDVTCTTISVANLDQNVTEEELKKAFSQLG 257
Query: 288 AGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSKPTPPGTS 347
+ V++ KG+G+V++ T A A+Q Q + + ++ SW P G
Sbjct: 258 EVIY--VKIPATKGYGYVQFKTRPSAEEAVQR---MQGQVIGQQAVRISWSKNPGQDGWV 312
Query: 348 SNPLPPPAAAPIPGLSAADLLAY--ERQIAMSKMGGVHALMHPQ---AQHPLKQAAMGVG 402
+ P D AY + ++ GG +PQ + +A G G
Sbjct: 313 TQADPNQWNGYYGYGQGYDAYAYGATQDPSVYAYGGYGYPQYPQQGEGTQDISNSAAG-G 371
Query: 403 SAGASQAIYD 412
AGA Q +YD
Sbjct: 372 VAGAEQELYD 381
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 48/94 (51%), Gaps = 3/94 (3%)
Query: 41 PIPSGNLPPGFDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSSYGFIH 100
P+ + PP D TC ++ V N+ VTE L++ FS G V K+ YG++
Sbjct: 218 PVQAYVAPPESD-VTCTTISVANLDQNVTEEELKKAFSQLGEVIYVKI--PATKGYGYVQ 274
Query: 101 YFDRRSAAMAILSLNGRHLFGQPIKVNWAYASGQ 134
+ R SA A+ + G+ + Q ++++W+ GQ
Sbjct: 275 FKTRPSAEEAVQRMQGQVIGQQAVRISWSKNPGQ 308
>gi|295789540|pdb|3MD3|A Chain A, Crystal Structure Of The First Two Rrm Domains Of Yeast
Poly Binding Protein (Pub1)
Length = 166
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 68/167 (40%), Positives = 104/167 (62%), Gaps = 4/167 (2%)
Query: 57 RSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLI--RKDKS-SYGFIHYFDRRSAAMAILS 113
R +YVGN+ +TE +L++ F GP+ K++ + +K+ +Y F+ Y A +A+ +
Sbjct: 1 RVLYVGNLDKAITEDILKQYFQVGGPIANIKIMIDKNNKNVNYAFVEYHQSHDANIALQT 60
Query: 114 LNGRHLFGQPIKVNWAYASGQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARV 173
LNG+ + +K+NWA+ S Q+ + FN+FVGDL+ V D TL F +PS V
Sbjct: 61 LNGKQIENNIVKINWAFQS-QQSSSDDTFNLFVGDLNVNVDDETLRNAFKDFPSYLSGHV 119
Query: 174 MWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATK 220
MWD +TG SRG+GFVSF +Q DAQ+A++ + G+ L R +R NWA K
Sbjct: 120 MWDMQTGSSRGYGFVSFTSQDDAQNAMDSMQGQDLNGRPLRINWAAK 166
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/201 (22%), Positives = 87/201 (43%), Gaps = 41/201 (20%)
Query: 144 IFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDL 203
++VG+L +T+ L F V ++ ++M D K ++ + FV + DA A+ L
Sbjct: 3 LYVGNLDKAITEDILKQYFQVGGPIANIKIMID-KNNKNVNYAFVEYHQSHDANIALQTL 61
Query: 204 TGKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYT 263
GK + + ++ NWA + +QSS +T N
Sbjct: 62 NGKQIENNIVKINWAFQS------QQSS---------------SDDTFN----------- 89
Query: 264 TVYVGNLAPEVTQLDLHRHFHS----LGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQM 319
++VG+L V L F L V+ +++ +G+GFV +++ +A A+
Sbjct: 90 -LFVGDLNVNVDDETLRNAFKDFPSYLSGHVMWDMQTGSSRGYGFVSFTSQDDAQNAM-- 146
Query: 320 GNTTQSSYLFGKQMKCSWGSK 340
++ Q L G+ ++ +W +K
Sbjct: 147 -DSMQGQDLNGRPLRINWAAK 166
>gi|388494114|gb|AFK35123.1| unknown [Medicago truncatula]
Length = 425
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 98/297 (32%), Positives = 154/297 (51%), Gaps = 37/297 (12%)
Query: 57 RSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS----YGFIHYFDRRSAAMAIL 112
+++++G++H+ + E L F+STG + K+IR S YGF +F +A +
Sbjct: 97 KTLWIGDLHSWMDESYLHRCFASTGEITSVKVIRNKHSGISEGYGFAEFFSHATAEKVLQ 156
Query: 113 SLNGRHL--FGQPIKVNWA-YASGQR-EDTSGHFNIFVGDLSPEVTDATLFACFSV-YPS 167
+ G + Q ++NWA +++G + D +IFVGDL+ +VTD+ L FS YPS
Sbjct: 157 NYAGILMPNADQAFRLNWATFSTGDKGSDNVTDLSIFVGDLAADVTDSVLHETFSSSYPS 216
Query: 168 CSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT--KGAGNN 225
A+V++D TGRS+G+GFV F ++ + A+ + G + SR +R AT K +G+
Sbjct: 217 VKAAKVVYDANTGRSKGYGFVRFGDESERSQAMTQMNGVYCSSRPMRIGAATPRKSSGHQ 276
Query: 226 EDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHS 285
Q TNG+S + +EA N TT++VG L VT DL + F
Sbjct: 277 PGGQ----------TNGTS------SQSEADSTN---TTIFVGGLDSNVTDEDLKQTFSQ 317
Query: 286 LGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQ-MKCSWGSKP 341
G I V++ KG GFV+++ A A+Q N T + GKQ ++ SWG P
Sbjct: 318 YGE--IASVKIPVGKGCGFVQFANRNNAEEALQKLNGT----MIGKQTVRLSWGRNP 368
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 88/189 (46%), Gaps = 26/189 (13%)
Query: 50 GFDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGP-VEGCKLIRKDKSS----YGFIHYFDR 104
G D T S++VG++ VT+ +L E FSS+ P V+ K++ + YGF+ + D
Sbjct: 183 GSDNVTDLSIFVGDLAADVTDSVLHETFSSSYPSVKAAKVVYDANTGRSKGYGFVRFGDE 242
Query: 105 RSAAMAILSLNGRHLFGQPIKVNWAY---------------ASGQREDTSGHFNIFVGDL 149
+ A+ +NG + +P+++ A S Q E S + IFVG L
Sbjct: 243 SERSQAMTQMNGVYCSSRPMRIGAATPRKSSGHQPGGQTNGTSSQSEADSTNTTIFVGGL 302
Query: 150 SPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLG 209
VTD L FS Y + ++ +G GFV F N+ +A+ A+ L G +G
Sbjct: 303 DSNVTDEDLKQTFSQYGEIASVKIP------VGKGCGFVQFANRNNAEEALQKLNGTMIG 356
Query: 210 SRQIRCNWA 218
+ +R +W
Sbjct: 357 KQTVRLSWG 365
>gi|224105517|ref|XP_002313840.1| predicted protein [Populus trichocarpa]
gi|222850248|gb|EEE87795.1| predicted protein [Populus trichocarpa]
Length = 412
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 94/295 (31%), Positives = 152/295 (51%), Gaps = 18/295 (6%)
Query: 56 CRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS----YGFIHYFDRRSAAMAI 111
++V+VG++ + E L FS TG V K+IR ++ YGF+ ++ +A +
Sbjct: 79 AKTVWVGDLLHWMDETYLHNCFSHTGEVSSVKIIRNKQTGQLEGYGFVEFYSHAAAEKVL 138
Query: 112 LSLNGRHL--FGQPIKVNWA-YASGQREDTSGHFNIFVGDLSPEVTDATLFACFSV-YPS 167
S +G + QP ++NWA +A +R D +IFVGDL+ +VTDA L F+ Y S
Sbjct: 139 QSYSGSMMPNTDQPFRLNWASFAGERRADAGSDLSIFVGDLAADVTDAMLQETFATKYAS 198
Query: 168 CSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNED 227
A+V+ D TGRS+G+GFV F ++ + AI ++ G + SR +R AT +
Sbjct: 199 VKGAKVVADSNTGRSKGYGFVRFGDENEKTRAITEMNGAYCSSRPMRIGVATPKKPSAYQ 258
Query: 228 KQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLG 287
+Q S V+ + S+ + + ++ NN TT++VG + +VT DL + F G
Sbjct: 259 QQYSSQALVLAGGHASNGTMAQGSQSDGDSNN---TTIFVGGIDSDVTDEDLRQPFSQFG 315
Query: 288 AGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQ-MKCSWGSKP 341
+ V++ KG FV+++ A A+Q N T GKQ ++ SWG P
Sbjct: 316 E--VVSVKMPTGKGCAFVQFANRKNAEDALQSLNGT----TIGKQTVRLSWGRTP 364
Score = 42.4 bits (98), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 48/94 (51%), Gaps = 2/94 (2%)
Query: 54 STCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSSYGFIHYFDRRSAAMAILS 113
S +++VG I + VT+ L++ FS G V K+ + F+ + +R++A A+ S
Sbjct: 288 SNNTTIFVGGIDSDVTDEDLRQPFSQFGEVVSVKMPTGKGCA--FVQFANRKNAEDALQS 345
Query: 114 LNGRHLFGQPIKVNWAYASGQREDTSGHFNIFVG 147
LNG + Q ++++W ++ H N + G
Sbjct: 346 LNGTTIGKQTVRLSWGRTPANKQWRGDHGNQWHG 379
>gi|225435468|ref|XP_002285479.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
isoform 1 [Vitis vinifera]
Length = 447
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 102/337 (30%), Positives = 164/337 (48%), Gaps = 22/337 (6%)
Query: 18 MQQALLQQQSLYHPGLLAAPQIEPIPSGNLPPGFDPSTC---RSVYVGNIHTQVTEPLLQ 74
M+ QQQ HP +A + + S P P++ R++++G++ V E L
Sbjct: 1 MEAQAHQQQQWMHPSHASAATVSSMASAQ--PYTQPTSVEEVRTLWIGDLQYWVDENYLH 58
Query: 75 EVFSSTGPVEGCKLIRKDKSS----YGFIHYFDRRSAAMAILSLNGRHLFG--QPIKVNW 128
F+ TG V K+IR + YGF+ + +A + + NG + G Q ++NW
Sbjct: 59 SCFAHTGEVISIKIIRNKITGQPEGYGFVEFVSHAAAERILQAYNGTQMPGTEQTFRLNW 118
Query: 129 A-YASGQREDTSG-HFNIFVGDLSPEVTDATLFACFSV-YPSCSDARVMWDQKTGRSRGF 185
A + G+R +G +IFVGDL+P+VTD L F YPS A+V+ D TGR++G+
Sbjct: 119 ASFGIGERRPDAGPEHSIFVGDLAPDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRTKGY 178
Query: 186 GFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSE 245
GFV F ++ + A+ ++ G + +R +R + AT +Q + A + +
Sbjct: 179 GFVKFSDEMERNRAMTEMNGVYCSTRPMRISAATPKKTTGFQQQYAAAAKALYPAPAYTT 238
Query: 246 DGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFV 305
+ + NN TT++VGNL P VT+ +L + F G V V++ +G GFV
Sbjct: 239 PPLQALPADNDINN---TTIFVGNLDPNVTEEELKQIFSQFGELVY--VKIPAGRGCGFV 293
Query: 306 RYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSKPT 342
++ T A AIQ T L ++ SWG PT
Sbjct: 294 QFGTRTSAEEAIQRMQGTVIGQLV---VRISWGRSPT 327
Score = 39.7 bits (91), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 43/85 (50%), Gaps = 2/85 (2%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSSYGFIHYFDRRSAAMAILSLNGR 117
+++VGN+ VTE L+++FS G + K+ GF+ + R SA AI + G
Sbjct: 254 TIFVGNLDPNVTEEELKQIFSQFGELVYVKI--PAGRGCGFVQFGTRTSAEEAIQRMQGT 311
Query: 118 HLFGQPIKVNWAYASGQREDTSGHF 142
+ ++++W + ++D G +
Sbjct: 312 VIGQLVVRISWGRSPTAKQDLPGSW 336
>gi|359478387|ref|XP_003632115.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
isoform 2 [Vitis vinifera]
Length = 438
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 102/337 (30%), Positives = 164/337 (48%), Gaps = 22/337 (6%)
Query: 18 MQQALLQQQSLYHPGLLAAPQIEPIPSGNLPPGFDPSTC---RSVYVGNIHTQVTEPLLQ 74
M+ QQQ HP +A + + S P P++ R++++G++ V E L
Sbjct: 1 MEAQAHQQQQWMHPSHASAATVSSMASAQ--PYTQPTSVEEVRTLWIGDLQYWVDENYLH 58
Query: 75 EVFSSTGPVEGCKLIRKDKSS----YGFIHYFDRRSAAMAILSLNGRHLFG--QPIKVNW 128
F+ TG V K+IR + YGF+ + +A + + NG + G Q ++NW
Sbjct: 59 SCFAHTGEVISIKIIRNKITGQPEGYGFVEFVSHAAAERILQAYNGTQMPGTEQTFRLNW 118
Query: 129 A-YASGQREDTSG-HFNIFVGDLSPEVTDATLFACFSV-YPSCSDARVMWDQKTGRSRGF 185
A + G+R +G +IFVGDL+P+VTD L F YPS A+V+ D TGR++G+
Sbjct: 119 ASFGIGERRPDAGPEHSIFVGDLAPDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRTKGY 178
Query: 186 GFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSE 245
GFV F ++ + A+ ++ G + +R +R + AT +Q + A + +
Sbjct: 179 GFVKFSDEMERNRAMTEMNGVYCSTRPMRISAATPKKTTGFQQQYAAAAKALYPAPAYTT 238
Query: 246 DGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFV 305
+ + NN TT++VGNL P VT+ +L + F G V V++ +G GFV
Sbjct: 239 PPLQALPADNDINN---TTIFVGNLDPNVTEEELKQIFSQFGELVY--VKIPAGRGCGFV 293
Query: 306 RYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSKPT 342
++ T A AIQ T L ++ SWG PT
Sbjct: 294 QFGTRTSAEEAIQRMQGTVIGQLV---VRISWGRSPT 327
>gi|297746331|emb|CBI16387.3| unnamed protein product [Vitis vinifera]
Length = 445
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 102/337 (30%), Positives = 164/337 (48%), Gaps = 22/337 (6%)
Query: 18 MQQALLQQQSLYHPGLLAAPQIEPIPSGNLPPGFDPSTC---RSVYVGNIHTQVTEPLLQ 74
M+ QQQ HP +A + + S P P++ R++++G++ V E L
Sbjct: 1 MEAQAHQQQQWMHPSHASAATVSSMASAQ--PYTQPTSVEEVRTLWIGDLQYWVDENYLH 58
Query: 75 EVFSSTGPVEGCKLIRKDKSS----YGFIHYFDRRSAAMAILSLNGRHLFG--QPIKVNW 128
F+ TG V K+IR + YGF+ + +A + + NG + G Q ++NW
Sbjct: 59 SCFAHTGEVISIKIIRNKITGQPEGYGFVEFVSHAAAERILQAYNGTQMPGTEQTFRLNW 118
Query: 129 A-YASGQREDTSG-HFNIFVGDLSPEVTDATLFACFSV-YPSCSDARVMWDQKTGRSRGF 185
A + G+R +G +IFVGDL+P+VTD L F YPS A+V+ D TGR++G+
Sbjct: 119 ASFGIGERRPDAGPEHSIFVGDLAPDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRTKGY 178
Query: 186 GFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSE 245
GFV F ++ + A+ ++ G + +R +R + AT +Q + A + +
Sbjct: 179 GFVKFSDEMERNRAMTEMNGVYCSTRPMRISAATPKKTTGFQQQYAAAAKALYPAPAYTT 238
Query: 246 DGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFV 305
+ + NN TT++VGNL P VT+ +L + F G V V++ +G GFV
Sbjct: 239 PPLQALPADNDINN---TTIFVGNLDPNVTEEELKQIFSQFGELVY--VKIPAGRGCGFV 293
Query: 306 RYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSKPT 342
++ T A AIQ T L ++ SWG PT
Sbjct: 294 QFGTRTSAEEAIQRMQGTVIGQLV---VRISWGRSPT 327
Score = 39.3 bits (90), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 43/85 (50%), Gaps = 2/85 (2%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSSYGFIHYFDRRSAAMAILSLNGR 117
+++VGN+ VTE L+++FS G + K+ GF+ + R SA AI + G
Sbjct: 254 TIFVGNLDPNVTEEELKQIFSQFGELVYVKI--PAGRGCGFVQFGTRTSAEEAIQRMQGT 311
Query: 118 HLFGQPIKVNWAYASGQREDTSGHF 142
+ ++++W + ++D G +
Sbjct: 312 VIGQLVVRISWGRSPTAKQDLPGSW 336
>gi|326528543|dbj|BAJ93453.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 416
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 97/306 (31%), Positives = 161/306 (52%), Gaps = 23/306 (7%)
Query: 49 PGFDPST---CRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS----YGFIHY 101
P P+T R++++G++ E L F+ TG V+ KLIR S YGFI +
Sbjct: 6 PYHQPTTLEEVRTLWIGDLQYWADENYLYGCFAHTGEVQSVKLIRNKLSGLPEGYGFIEF 65
Query: 102 FDRRSAAMAILSLNGRHLFGQPI--KVNWA-YASGQ-REDTSGHFNIFVGDLSPEVTDAT 157
+A + + NG + G + ++NWA ++SG+ R D +IFVGDL+P+VTD
Sbjct: 66 ISHEAAEKVLQAYNGAQMPGTELTFRLNWASFSSGEKRPDAGPDHSIFVGDLAPDVTDYL 125
Query: 158 LFACFSV-YPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCN 216
L F V Y S A+V+ D TGRS+G+GFV F ++ + A++++ G + +R +R +
Sbjct: 126 LQETFRVNYSSVRGAKVVTDPNTGRSKGYGFVKFADENEKTRAMSEMNGVYCSTRPMRIS 185
Query: 217 WATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQ 276
A + Q AK++ T + + T P+++ TT+++GNL P VT+
Sbjct: 186 AAIPKKSSGSQLQYGAAKAMYPATAYAIPQAQ----TVLPDSDLTNTTIFIGNLDPNVTE 241
Query: 277 LDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQ-MKC 335
+L + G + V++ KG GFV+Y++ A A A+Q + T + G+Q ++
Sbjct: 242 EELRQICVQFGELIY--VKIPVGKGCGFVQYASRASAEEAVQRLHGT----VIGQQVVRL 295
Query: 336 SWGSKP 341
SWG P
Sbjct: 296 SWGRSP 301
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 88/207 (42%), Gaps = 40/207 (19%)
Query: 58 SVYVGNIHTQVTEPLLQEVFS-STGPVEGCKLIRKDKSS----YGFIHYFDRRSAAMAIL 112
S++VG++ VT+ LLQE F + V G K++ + YGF+ + D A+
Sbjct: 111 SIFVGDLAPDVTDYLLQETFRVNYSSVRGAKVVTDPNTGRSKGYGFVKFADENEKTRAMS 170
Query: 113 SLNGRHLFGQPIKVN-----------------------WAYASGQREDTS-----GHFNI 144
+NG + +P++++ AYA Q + + I
Sbjct: 171 EMNGVYCSTRPMRISAAIPKKSSGSQLQYGAAKAMYPATAYAIPQAQTVLPDSDLTNTTI 230
Query: 145 FVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLT 204
F+G+L P VT+ L C + K +G GFV + ++ A+ A+ L
Sbjct: 231 FIGNLDPNVTEEELRQI------CVQFGELIYVKIPVGKGCGFVQYASRASAEEAVQRLH 284
Query: 205 GKWLGSRQIRCNWATKGAGNNEDKQSS 231
G +G + +R +W + N +D+ ++
Sbjct: 285 GTVIGQQVVRLSWG-RSPANKQDQSAA 310
Score = 39.3 bits (90), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 55/115 (47%), Gaps = 10/115 (8%)
Query: 26 QSLYHPGLLAAPQIEPI-PSGNLPPGFDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVE 84
+++Y A PQ + + P +L T ++++GN+ VTE L+++ G +
Sbjct: 203 KAMYPATAYAIPQAQTVLPDSDL-------TNTTIFIGNLDPNVTEEELRQICVQFGELI 255
Query: 85 GCKLIRKDKSSYGFIHYFDRRSAAMAILSLNGRHLFGQPIKVNWAYASGQREDTS 139
K+ GF+ Y R SA A+ L+G + Q ++++W + ++D S
Sbjct: 256 YVKIPVGKGC--GFVQYASRASAEEAVQRLHGTVIGQQVVRLSWGRSPANKQDQS 308
>gi|224123466|ref|XP_002330321.1| predicted protein [Populus trichocarpa]
gi|222871356|gb|EEF08487.1| predicted protein [Populus trichocarpa]
Length = 397
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 93/295 (31%), Positives = 154/295 (52%), Gaps = 18/295 (6%)
Query: 56 CRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS----YGFIHYFDRRSAAMAI 111
++++VG++ + E L FS TG V K+IR ++ YGF+ ++ R +A +
Sbjct: 64 AKTIWVGDLLHWMDEAYLHNCFSHTGEVSSVKIIRNKQTGQLEGYGFVEFYSRAAAEKVL 123
Query: 112 LSLNGRHL--FGQPIKVNWA-YASGQREDTSGHFNIFVGDLSPEVTDATLFACFS-VYPS 167
S +G + QP ++NWA +A +R D +IFVGDL+ +VTD+ L F+ YPS
Sbjct: 124 QSYSGSMMPNTEQPFRLNWASFAGERRADPGSDLSIFVGDLAADVTDSMLQETFAGKYPS 183
Query: 168 CSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNED 227
A+V+ D TGRS+G+GFV F ++ + A+ ++ G + SR +R AT +
Sbjct: 184 VKGAKVVIDSNTGRSKGYGFVRFGDENEKTRAMMEMNGAFCSSRPMRIGVATPKKPSAYQ 243
Query: 228 KQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLG 287
+Q S V+ + S+ + + ++ NN TT++VG + +VT DL + F G
Sbjct: 244 QQYSSQALVLAGGHASNGAMAQGSQSDGDSNN---TTIFVGGIDSDVTDEDLRQPFSQFG 300
Query: 288 AGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQ-MKCSWGSKP 341
+ V++ KG FV+++ A A+Q N T GKQ ++ SWG P
Sbjct: 301 E--VVSVKIPVGKGCAFVQFANRKNAEDALQSLNGT----TIGKQTVRLSWGRTP 349
Score = 41.2 bits (95), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 46/90 (51%), Gaps = 2/90 (2%)
Query: 54 STCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSSYGFIHYFDRRSAAMAILS 113
S +++VG I + VT+ L++ FS G V K+ + F+ + +R++A A+ S
Sbjct: 273 SNNTTIFVGGIDSDVTDEDLRQPFSQFGEVVSVKIPVGKGCA--FVQFANRKNAEDALQS 330
Query: 114 LNGRHLFGQPIKVNWAYASGQREDTSGHFN 143
LNG + Q ++++W ++ H N
Sbjct: 331 LNGTTIGKQTVRLSWGRTPANKQWRGDHGN 360
>gi|315585206|gb|ADU34124.1| hypothetical protein [Vitis labrusca]
Length = 66
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 64/66 (96%), Positives = 65/66 (98%)
Query: 129 AYASGQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFV 188
AYAS QREDTSGH+NIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFV
Sbjct: 1 AYASSQREDTSGHYNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFV 60
Query: 189 SFRNQQ 194
SFRNQQ
Sbjct: 61 SFRNQQ 66
>gi|75334880|sp|Q9LEB4.1|RBP45_NICPL RecName: Full=Polyadenylate-binding protein RBP45;
Short=Poly(A)-binding protein RBP45; AltName:
Full=RNA-binding protein 45; Short=NplRBP45
gi|9663767|emb|CAC01237.1| RNA Binding Protein 45 [Nicotiana plumbaginifolia]
Length = 409
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 103/330 (31%), Positives = 161/330 (48%), Gaps = 35/330 (10%)
Query: 21 ALLQQQSLYHPGLLAAPQIEPIPSGNLPPGFDPSTCRSVYVGNIHTQVTEPLLQEVFSST 80
A QQ S G +A P P+GN P+ RS+++G++ + E L F T
Sbjct: 54 AWAQQPSQQQYGAMATTNPNPSPTGN------PNEVRSLWIGDLQYWMDENYLSTCFYHT 107
Query: 81 GPVEGCKLIRKDKSS----YGFIHYFDRRSAAMAILSLNGRHL--FGQPIKVNWA-YASG 133
G + K+IR ++ YGF+ + +A + + NG + Q ++NWA +G
Sbjct: 108 GELVSAKVIRNKQTGQSEGYGFLEFRSHAAAETILQTYNGTLMPNVEQNFRMNWASLGAG 167
Query: 134 QREDTSGHFNIFVGDLSPEVTDATLFACF-SVYPSCSDARVMWDQKTGRSRGFGFVSFRN 192
+R D S IFVGDL+ +VTD L F SVY S A+V+ D+ TGRS+G+GFV F +
Sbjct: 168 ERRDDSAEHTIFVGDLAADVTDYILQETFKSVYSSVRGAKVVTDRITGRSKGYGFVKFAD 227
Query: 193 QQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTN 252
+ + A+ ++ G +R +R G N+ + K+ + N + G
Sbjct: 228 ESEQLRAMTEMNGVLCSTRPMRI-----GPAANKKPVGTPQKATYQ--NPQATQG----- 275
Query: 253 TEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAE 312
E++P TT++VG L P V + L + F G V V++ K GFV++ T A
Sbjct: 276 ----ESDPNNTTIFVGGLDPTVAEEHLRQVFSPYGELV--HVKIVAGKRCGFVQFGTRAS 329
Query: 313 AALAIQMGNTTQSSYLFGKQMKCSWGSKPT 342
A A+ N TQ L G+ ++ SWG P+
Sbjct: 330 AEQALSSLNGTQ---LGGQSIRLSWGRSPS 356
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 83/198 (41%), Gaps = 27/198 (13%)
Query: 52 DPSTCRSVYVGNIHTQVTEPLLQEVFSST-GPVEGCKL----IRKDKSSYGFIHYFDRRS 106
D S +++VG++ VT+ +LQE F S V G K+ I YGF+ + D
Sbjct: 171 DDSAEHTIFVGDLAADVTDYILQETFKSVYSSVRGAKVVTDRITGRSKGYGFVKFADESE 230
Query: 107 AAMAILSLNGRHLFGQPIKVNWAY----------------ASGQREDTSGHFNIFVGDLS 150
A+ +NG +P+++ A + Q E + IFVG L
Sbjct: 231 QLRAMTEMNGVLCSTRPMRIGPAANKKPVGTPQKATYQNPQATQGESDPNNTTIFVGGLD 290
Query: 151 PEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGS 210
P V + L FS Y +++ ++ G FV F + A+ A++ L G LG
Sbjct: 291 PTVAEEHLRQVFSPYGELVHVKIVAGKRCG------FVQFGTRASAEQALSSLNGTQLGG 344
Query: 211 RQIRCNWATKGAGNNEDK 228
+ IR +W + D+
Sbjct: 345 QSIRLSWGRSPSSKQTDQ 362
>gi|194702946|gb|ACF85557.1| unknown [Zea mays]
gi|413921126|gb|AFW61058.1| hypothetical protein ZEAMMB73_234884 [Zea mays]
Length = 456
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 93/299 (31%), Positives = 151/299 (50%), Gaps = 35/299 (11%)
Query: 53 PSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS----YGFIHYFDRRSAA 108
PS R++++G++ + + + F+STG V+ KLIR + YGFI + R +A
Sbjct: 117 PSEVRTLWIGDLQYWMDDNYIYGCFASTGEVQNVKLIRDKHTGQLQGYGFIEFISRAAAE 176
Query: 109 MAILSLNGRHL--FGQPIKVNWAYASGQREDTSGHFNIFVGDLSPEVTDATLFACFSV-Y 165
+ + NG + P ++NWA A +R+DT + IFVGDL+ +VTD L F Y
Sbjct: 177 RVLQTYNGTMMPNVELPFRLNWASAGEKRDDTP-DYTIFVGDLAADVTDYVLQETFRAHY 235
Query: 166 PSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNN 225
PS A+V+ D+ T R++G+GFV F + + A+ ++ G SR +R G
Sbjct: 236 PSVKGAKVVTDKLTMRTKGYGFVKFGDPNEQARAMTEMNGMLCSSRPMRI-------GPA 288
Query: 226 EDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHS 285
+K+++ + V G D N+P TT++VG L P VT+ L + F
Sbjct: 289 ANKKATVVQEKVPSAQGVQSD-----------NDPNNTTIFVGGLDPNVTEDMLKQVFTP 337
Query: 286 LGAGVIEEVRVQRDKGFGFVRYS--THAEAALAIQMGNTTQSSYLFGKQMKCSWGSKPT 342
G + V++ K GFV+Y+ + AE AL I Q + + G+ ++ SWG P+
Sbjct: 338 YGD--VVHVKIPVGKRCGFVQYANRSSAEEALVI-----LQGTLVGGQNVRLSWGRSPS 389
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 48/85 (56%), Gaps = 3/85 (3%)
Query: 52 DPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSSYGFIHYFDRRSAAMAI 111
DP+ +++VG + VTE +L++VF+ G V K+ + GF+ Y +R SA A+
Sbjct: 311 DPNNT-TIFVGGLDPNVTEDMLKQVFTPYGDVVHVKIPVGKRC--GFVQYANRSSAEEAL 367
Query: 112 LSLNGRHLFGQPIKVNWAYASGQRE 136
+ L G + GQ ++++W + ++
Sbjct: 368 VILQGTLVGGQNVRLSWGRSPSNKQ 392
>gi|82621158|gb|ABB86267.1| DNA binding protein ACBF-like [Solanum tuberosum]
Length = 372
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 96/295 (32%), Positives = 159/295 (53%), Gaps = 20/295 (6%)
Query: 57 RSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS----YGFIHYFDRRSAAMAIL 112
+++++G++ + E L FS G V K+IR ++ YGF+ + +A +
Sbjct: 33 KTIWIGDLQQWMDENYLHSCFSHAGEVISVKIIRNKQTGQSERYGFVEFNTHAAAEKVLQ 92
Query: 113 SLNGRHL--FGQPIKVNWA-YASGQ-REDTSGHFNIFVGDLSPEVTDATLFACF-SVYPS 167
S NG + QP ++NWA +++G+ R +T F+IFVGDL+ +VTD L F S +PS
Sbjct: 93 SYNGTMMPNAEQPFRLNWAAFSAGEKRAETGSDFSIFVGDLASDVTDTMLRDTFASRFPS 152
Query: 168 CSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNED 227
A+V+ D TG S+G+GFV F ++ + A+ ++ G + SR +R AT + +
Sbjct: 153 VKGAKVVVDANTGHSKGYGFVRFGDESERSRAMTEMNGIYCSSRPMRVGVATPKKPSAQQ 212
Query: 228 KQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLG 287
+ SS A V L+ G + +G T +++ + + TT++VG L +VT +L + F G
Sbjct: 213 QFSSQA---VILSGGYASNGSATHGSQS-DGDSSNTTIFVGGLDSDVTDEELRQSFTQFG 268
Query: 288 AGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQ-MKCSWGSKP 341
V V++ KG GFV++S + A AIQ S + GKQ ++ SWG P
Sbjct: 269 EVV--SVKIPAGKGCGFVQFSDRSSAQEAIQ----KLSGAIIGKQAVRLSWGRSP 317
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 41/75 (54%), Gaps = 2/75 (2%)
Query: 54 STCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSSYGFIHYFDRRSAAMAILS 113
S+ +++VG + + VT+ L++ F+ G V K+ GF+ + DR SA AI
Sbjct: 241 SSNTTIFVGGLDSDVTDEELRQSFTQFGEVVSVKI--PAGKGCGFVQFSDRSSAQEAIQK 298
Query: 114 LNGRHLFGQPIKVNW 128
L+G + Q ++++W
Sbjct: 299 LSGAIIGKQAVRLSW 313
>gi|413921124|gb|AFW61056.1| hypothetical protein ZEAMMB73_234884 [Zea mays]
Length = 453
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 93/299 (31%), Positives = 151/299 (50%), Gaps = 35/299 (11%)
Query: 53 PSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS----YGFIHYFDRRSAA 108
PS R++++G++ + + + F+STG V+ KLIR + YGFI + R +A
Sbjct: 107 PSEVRTLWIGDLQYWMDDNYIYGCFASTGEVQNVKLIRDKHTGQLQGYGFIEFISRAAAE 166
Query: 109 MAILSLNGRHL--FGQPIKVNWAYASGQREDTSGHFNIFVGDLSPEVTDATLFACFSV-Y 165
+ + NG + P ++NWA A +R+DT + IFVGDL+ +VTD L F Y
Sbjct: 167 RVLQTYNGTMMPNVELPFRLNWASAGEKRDDTP-DYTIFVGDLAADVTDYVLQETFRAHY 225
Query: 166 PSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNN 225
PS A+V+ D+ T R++G+GFV F + + A+ ++ G SR +R G
Sbjct: 226 PSVKGAKVVTDKLTMRTKGYGFVKFGDPNEQARAMTEMNGMLCSSRPMRI-------GPA 278
Query: 226 EDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHS 285
+K+++ + V G D N+P TT++VG L P VT+ L + F
Sbjct: 279 ANKKATVVQEKVPSAQGVQSD-----------NDPNNTTIFVGGLDPNVTEDMLKQVFTP 327
Query: 286 LGAGVIEEVRVQRDKGFGFVRYS--THAEAALAIQMGNTTQSSYLFGKQMKCSWGSKPT 342
G + V++ K GFV+Y+ + AE AL I Q + + G+ ++ SWG P+
Sbjct: 328 YGD--VVHVKIPVGKRCGFVQYANRSSAEEALVI-----LQGTLVGGQNVRLSWGRSPS 379
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 48/85 (56%), Gaps = 3/85 (3%)
Query: 52 DPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSSYGFIHYFDRRSAAMAI 111
DP+ +++VG + VTE +L++VF+ G V K+ + GF+ Y +R SA A+
Sbjct: 301 DPNNT-TIFVGGLDPNVTEDMLKQVFTPYGDVVHVKIPVGKRC--GFVQYANRSSAEEAL 357
Query: 112 LSLNGRHLFGQPIKVNWAYASGQRE 136
+ L G + GQ ++++W + ++
Sbjct: 358 VILQGTLVGGQNVRLSWGRSPSNKQ 382
>gi|356500047|ref|XP_003518846.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
[Glycine max]
Length = 431
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 101/300 (33%), Positives = 162/300 (54%), Gaps = 26/300 (8%)
Query: 56 CRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS----YGFIHYFDRRSAAMAI 111
R+V++G++H + E L F+ TG V K+IR ++ YGF+ ++ R +A +
Sbjct: 99 IRTVWLGDLHHWMDENYLHNCFAHTGEVVSAKVIRNKQTGQSEGYGFVEFYSRGTAEKVL 158
Query: 112 LSLNGRHL--FGQPIKVNWA-YASGQRE--DTSGHFNIFVGDLSPEVTDATLFACFS-VY 165
+ NG + Q ++NWA +++G+R D + +IFVGDL+ +VTDA L F+ Y
Sbjct: 159 QNYNGTMMPNTDQAFRLNWATFSAGERRSSDATSDLSIFVGDLAIDVTDAMLQDTFAGRY 218
Query: 166 PSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT-KGAGN 224
S A+V+ D TGRS+G+GFV F ++ + A+ ++ G + SR +R AT K
Sbjct: 219 SSIKGAKVVIDSNTGRSKGYGFVRFGDENERTRAMTEMNGVYCSSRPMRIGVATPKKTYG 278
Query: 225 NEDKQSSDAKSVVELTNGSSEDG--KETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRH 282
+ + SS A V L G S +G + +++E NN TT++VG L + + DL +
Sbjct: 279 FQQQYSSQA---VVLAGGHSANGAVAQGSHSEGDINN---TTIFVGGLDSDTSDEDLRQP 332
Query: 283 FHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQ-MKCSWGSKP 341
F L G + V++ KG GFV+++ A AIQ N T + GKQ ++ SWG P
Sbjct: 333 F--LQFGEVVSVKIPVGKGCGFVQFADRKNAEEAIQGLNGT----VIGKQTVRLSWGRSP 386
Score = 38.9 bits (89), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 43/79 (54%), Gaps = 4/79 (5%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKL-IRKDKSSYGFIHYFDRRSAAMAILSLNG 116
+++VG + + ++ L++ F G V K+ + K GF+ + DR++A AI LNG
Sbjct: 314 TIFVGGLDSDTSDEDLRQPFLQFGEVVSVKIPVGK---GCGFVQFADRKNAEEAIQGLNG 370
Query: 117 RHLFGQPIKVNWAYASGQR 135
+ Q ++++W + G +
Sbjct: 371 TVIGKQTVRLSWGRSPGNK 389
>gi|359492060|ref|XP_003634360.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
isoform 2 [Vitis vinifera]
Length = 418
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 93/295 (31%), Positives = 151/295 (51%), Gaps = 27/295 (9%)
Query: 57 RSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS----YGFIHYFDRRSAAMAIL 112
R+++VG++H + E L F++TG + K+IR ++ YGF+ +F +A +
Sbjct: 84 RTIWVGDLHNWMDENYLHSCFAATGELASMKVIRNKQTGSSEGYGFVEFFSHAAAEKVLQ 143
Query: 113 SLNGRHL--FGQPIKVNWAYAS--GQREDTSGHFNIFVGDLSPEVTDATLFACFS-VYPS 167
G + QP ++NWA S +R D +IFVGDL+ +V+D+ L F+ YPS
Sbjct: 144 GYAGVLMPNTDQPFRLNWATFSMGDKRSDNGPDLSIFVGDLASDVSDSLLHETFAGKYPS 203
Query: 168 CSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNED 227
A+V++D TGRS+G+GFV F ++ + A+ ++ G + SR +R AT
Sbjct: 204 VKAAKVVFDANTGRSKGYGFVRFGDENERSQAMTEMNGVYCSSRPMRIGAATP------- 256
Query: 228 KQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLG 287
++SS + G + +G + N TT++VG L P V+ DL + F G
Sbjct: 257 RKSSGYQQQYSSHGGYASNGASVQSDGDSMN----TTIFVGGLDPNVSDEDLRQPFSQYG 312
Query: 288 AGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQ-MKCSWGSKP 341
I V++ KG GFV+++ A A+Q N T + GKQ ++ SWG P
Sbjct: 313 E--IVSVKIPVGKGCGFVQFANRNNAEDALQKLNGT----VIGKQTVRLSWGRNP 361
>gi|345497985|ref|XP_001603213.2| PREDICTED: nucleolysin TIA-1 isoform p40-like [Nasonia vitripennis]
Length = 386
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 80/214 (37%), Positives = 121/214 (56%), Gaps = 22/214 (10%)
Query: 129 AYASGQRE--DTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFG 186
A+A+ Q + S H++IFVGDLSPE+ TL F+ + SD RV+ D +T +S+G+G
Sbjct: 45 AHATNQNASVNKSEHYHIFVGDLSPEIETQTLREAFAPFGEISDCRVVRDPQTMKSKGYG 104
Query: 187 FVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSED 246
FVSF + +A+SAI + G+WLGSR IR NWAT+ + + ++ + E+ N SS
Sbjct: 105 FVSFVKKAEAESAIGAMNGQWLGSRSIRTNWATRKPPAPKSEANTKPLTFDEVYNQSS-- 162
Query: 247 GKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVR 306
P TVY G L +T+ + + F G+ I+E+RV +DKG+ F+R
Sbjct: 163 -------------PTNCTVYCGGLTNGLTEELMQKTFSPFGS--IQEIRVFKDKGYAFIR 207
Query: 307 YSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSK 340
+ST A AI + T + G+ +KCSWG +
Sbjct: 208 FSTKESATHAIVAVHNTD---INGQTVKCSWGKE 238
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/233 (22%), Positives = 104/233 (44%), Gaps = 29/233 (12%)
Query: 24 QQQSLYHPGLLAAPQIEPIPSGNLPPGFDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPV 83
QQQ L P + AAP I + N + S ++VG++ ++ L+E F+ G +
Sbjct: 29 QQQKLEPPKMQAAPTIAHATNQNA--SVNKSEHYHIFVGDLSPEIETQTLREAFAPFGEI 86
Query: 84 EGCKLIRKDKS----SYGFIHYFDRRSAAMAILSLNGRHLFGQPIKVNWA---------- 129
C+++R ++ YGF+ + + A AI ++NG+ L + I+ NWA
Sbjct: 87 SDCRVVRDPQTMKSKGYGFVSFVKKAEAESAIGAMNGQWLGSRSIRTNWATRKPPAPKSE 146
Query: 130 -------YASGQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRS 182
+ + + + ++ G L+ +T+ + FS + S + RV D
Sbjct: 147 ANTKPLTFDEVYNQSSPTNCTVYCGGLTNGLTEELMQKTFSPFGSIQEIRVFKD------ 200
Query: 183 RGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSSDAKS 235
+G+ F+ F ++ A AI + + + ++C+W + N +Q+ A S
Sbjct: 201 KGYAFIRFSTKESATHAIVAVHNTDINGQTVKCSWGKESGDPNNAQQTGQALS 253
>gi|168064363|ref|XP_001784132.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162664332|gb|EDQ51056.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 453
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 96/298 (32%), Positives = 155/298 (52%), Gaps = 21/298 (7%)
Query: 56 CRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSSY----GFIHYFDRRSAAMAI 111
++++VG++ + E L F TG V+ K+IR ++ Y GF+ + +A +
Sbjct: 42 VKTLWVGDLQYWMDENYLHTAFVHTGEVQSVKIIRNKQTGYSEGYGFVEFVSHVAAEKIL 101
Query: 112 LSLNGRHLFG--QPIKVNWA-YASGQREDTSG-HFNIFVGDLSPEVTDATLFACFSV-YP 166
+ NG + QP ++NWA + G+R +G +IFVGDL+P+VTD L F YP
Sbjct: 102 QAYNGTQMPNTEQPFRLNWASFGIGERRPEAGPEHSIFVGDLAPDVTDYMLQETFRTRYP 161
Query: 167 SCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT--KGAGN 224
S A+V+ D TGRS+G+GFV F ++ + A++++ G + SR +R + AT K G
Sbjct: 162 SVKGAKVVTDANTGRSKGYGFVRFGDEMERNRAMSEMNGIYCSSRPMRISAATPKKSLGP 221
Query: 225 NEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFH 284
N Q + S V + ++ + + +N+P TT++VG L P V DL F
Sbjct: 222 N---QLNPKVSPVAVATYAAYGAQPSPQAFPTDNDPNNTTIFVGGLDPAVGDEDLRNVFG 278
Query: 285 SLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQ-MKCSWGSKP 341
G V V++ KG GFV+++ A A A+Q + T + G Q ++ SWG P
Sbjct: 279 QFGELVY--VKIPAGKGCGFVQFTHRACAEEALQRLHQT----VIGTQAVRLSWGRSP 330
>gi|226504372|ref|NP_001141359.1| uncharacterized protein LOC100273450 [Zea mays]
gi|194704160|gb|ACF86164.1| unknown [Zea mays]
gi|413921127|gb|AFW61059.1| hypothetical protein ZEAMMB73_234884 [Zea mays]
Length = 453
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 93/299 (31%), Positives = 151/299 (50%), Gaps = 35/299 (11%)
Query: 53 PSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS----YGFIHYFDRRSAA 108
PS R++++G++ + + + F+STG V+ KLIR + YGFI + R +A
Sbjct: 117 PSEVRTLWIGDLQYWMDDNYIYGCFASTGEVQNVKLIRDKHTGQLQGYGFIEFISRAAAE 176
Query: 109 MAILSLNGRHL--FGQPIKVNWAYASGQREDTSGHFNIFVGDLSPEVTDATLFACFSV-Y 165
+ + NG + P ++NWA A +R+DT + IFVGDL+ +VTD L F Y
Sbjct: 177 RVLQTYNGTMMPNVELPFRLNWASAGEKRDDTP-DYTIFVGDLAADVTDYVLQETFRAHY 235
Query: 166 PSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNN 225
PS A+V+ D+ T R++G+GFV F + + A+ ++ G SR +R G
Sbjct: 236 PSVKGAKVVTDKLTMRTKGYGFVKFGDPNEQARAMTEMNGMLCSSRPMRI-------GPA 288
Query: 226 EDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHS 285
+K+++ + V G D N+P TT++VG L P VT+ L + F
Sbjct: 289 ANKKATVVQEKVPSAQGVQSD-----------NDPNNTTIFVGGLDPNVTEDMLKQVFTP 337
Query: 286 LGAGVIEEVRVQRDKGFGFVRYS--THAEAALAIQMGNTTQSSYLFGKQMKCSWGSKPT 342
G + V++ K GFV+Y+ + AE AL I Q + + G+ ++ SWG P+
Sbjct: 338 YGD--VVHVKIPVGKRCGFVQYANRSSAEEALVI-----LQGTLVGGQNVRLSWGRSPS 389
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 48/85 (56%), Gaps = 3/85 (3%)
Query: 52 DPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSSYGFIHYFDRRSAAMAI 111
DP+ +++VG + VTE +L++VF+ G V K+ + GF+ Y +R SA A+
Sbjct: 311 DPNNT-TIFVGGLDPNVTEDMLKQVFTPYGDVVHVKIPVGKRC--GFVQYANRSSAEEAL 367
Query: 112 LSLNGRHLFGQPIKVNWAYASGQRE 136
+ L G + GQ ++++W + ++
Sbjct: 368 VILQGTLVGGQNVRLSWGRSPSNKQ 392
>gi|50308683|ref|XP_454345.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49643480|emb|CAG99432.1| KLLA0E08779p [Kluyveromyces lactis]
Length = 475
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 71/168 (42%), Positives = 104/168 (61%), Gaps = 6/168 (3%)
Query: 57 RSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS----YGFIHYFDRRSAAMAIL 112
+ +YVGN+ + + LL++ F G + K+I DK+S Y F+ YF+ A +A
Sbjct: 97 KILYVGNLPKSIDDDLLKQYFQIGGSISSVKII-PDKNSQECNYAFVEYFEPHDANVAYQ 155
Query: 113 SLNGRHLFGQPIKVNWAYASGQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDAR 172
+LNG+ + G+ +K+NWA+ S Q+ ++ FN+FVGDL+ +V DATL F +PS A
Sbjct: 156 TLNGKEVEGKVLKINWAFQS-QQVNSDETFNLFVGDLNVDVDDATLAGTFKEFPSFIQAH 214
Query: 173 VMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATK 220
VMWD ++GRSRG+GFVSF Q AQ A+ G L R +R NWA+K
Sbjct: 215 VMWDMQSGRSRGYGFVSFGEQDQAQVAMETKQGFELNGRALRINWASK 262
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 85/204 (41%), Gaps = 41/204 (20%)
Query: 144 IFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDL 203
++VG+L + D L F + S S +++ D K + + FV + DA A L
Sbjct: 99 LYVGNLPKSIDDDLLKQYFQIGGSISSVKIIPD-KNSQECNYAFVEYFEPHDANVAYQTL 157
Query: 204 TGKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYT 263
GK + + ++ NWA + N D ET N
Sbjct: 158 NGKEVEGKVLKINWAFQSQQVNSD---------------------ETFN----------- 185
Query: 264 TVYVGNLAPEVTQLDLHRHFHS----LGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQM 319
++VG+L +V L F + A V+ +++ R +G+GFV + +A +A++
Sbjct: 186 -LFVGDLNVDVDDATLAGTFKEFPSFIQAHVMWDMQSGRSRGYGFVSFGEQDQAQVAME- 243
Query: 320 GNTTQSSYLFGKQMKCSWGSKPTP 343
T Q L G+ ++ +W SK P
Sbjct: 244 --TKQGFELNGRALRINWASKREP 265
Score = 42.4 bits (98), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 48/97 (49%), Gaps = 10/97 (10%)
Query: 260 PQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQM 319
P+ TT Y+GN+ + DL + G I + + +KG F++Y TH +AAL I
Sbjct: 356 PRVTTAYIGNIPHFAQEHDLIPLLQNFG--FIIDFKHYPEKGCCFIKYDTHEQAALCI-- 411
Query: 320 GNTTQSSYLF-GKQMKCSWG-SKPT--PPGTSSNPLP 352
+++ F G+ ++ WG KPT P P+P
Sbjct: 412 --VALTNFPFQGRNLRTGWGKEKPTFIRPQQQMGPIP 446
>gi|357465449|ref|XP_003603009.1| RNA-binding protein [Medicago truncatula]
gi|355492057|gb|AES73260.1| RNA-binding protein [Medicago truncatula]
Length = 420
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 99/299 (33%), Positives = 155/299 (51%), Gaps = 40/299 (13%)
Query: 57 RSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKS----SYGFIHYFDRRSAAMAIL 112
++++VG++H + E L F+STG + K+IR ++ YGF+ + +A +
Sbjct: 93 KTLWVGDLHHWMDENYLHRCFASTGEIFSIKVIRNKQTCQTEGYGFVEFTSHGTAEKVLQ 152
Query: 113 SLNGRHLFG--QPIKVNWA-YASG--QREDTSGHFNIFVGDLSPEVTDATLFACFS-VYP 166
+ G + QP ++NWA +++G +R D +IFVGDL+ +VTD L FS YP
Sbjct: 153 TYAGMLMPNTEQPFRLNWATFSTGDHKRSDNVPDLSIFVGDLAADVTDTMLLETFSDKYP 212
Query: 167 SCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT--KGAGN 224
S A+V++D TGRS+G+GFV F + + A+N++ G + SR +R AT K +G
Sbjct: 213 SVKAAKVVFDANTGRSKGYGFVRFGDDGERSKALNEMNGVFCSSRAMRIGAATPRKSSGY 272
Query: 225 NEDKQSSDAKSVVELTNGS-SEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHF 283
+ QS NG+ S+ ++TN TT++VG L P T DL + F
Sbjct: 273 QQGGQS----------NGTPSQSDTDSTN----------TTIFVGGLDPSATAEDLRQPF 312
Query: 284 HSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQ-MKCSWGSKP 341
G I V++ KG GFV+++ A A+Q N T GKQ ++ SWG P
Sbjct: 313 SQYGE--IVSVKIPVGKGCGFVQFANRNNAEEALQKLNGT----TVGKQTVRLSWGRNP 365
>gi|189233691|ref|XP_969160.2| PREDICTED: similar to AGAP005292-PA [Tribolium castaneum]
Length = 358
Score = 138 bits (348), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 85/217 (39%), Positives = 124/217 (57%), Gaps = 26/217 (11%)
Query: 141 HFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAI 200
H +IFVGDLSPE+ TL F+ + SD RV+ D +T +S+G+GFVSF + +A+SAI
Sbjct: 50 HHHIFVGDLSPEIETQTLREAFAAFGEISDCRVVRDPQTLKSKGYGFVSFIKKAEAESAI 109
Query: 201 NDLTGKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNP 260
N + G+WLGSR IR NWAT+ + + +S S E+ N SS TN
Sbjct: 110 NAMNGQWLGSRSIRTNWATRKPPAPKSEANSKPMSFDEIYNQSS-----ATN-------- 156
Query: 261 QYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMG 320
TVY G + + + L + F L G+I+E+RV ++KG+ F+R+ST A AI +G
Sbjct: 157 --CTVYCGGITNGLCEDLLQKTF--LPYGIIQEIRVFKEKGYAFIRFSTKESATHAI-VG 211
Query: 321 NTTQSSYLFGKQMKCSWGSKPTPPGTSSNPLPPPAAA 357
+S + G+ +KCSWG + S +P PAA+
Sbjct: 212 --VHNSEIGGQTVKCSWGKE------SGDPNNAPAAS 240
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 42/219 (19%), Positives = 96/219 (43%), Gaps = 27/219 (12%)
Query: 46 NLPPGFDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKS----SYGFIHY 101
N P + + ++VG++ ++ L+E F++ G + C+++R ++ YGF+ +
Sbjct: 40 NTPSSNNKAEHHHIFVGDLSPEIETQTLREAFAAFGEISDCRVVRDPQTLKSKGYGFVSF 99
Query: 102 FDRRSAAMAILSLNGRHLFGQPIKVNWA-----------------YASGQREDTSGHFNI 144
+ A AI ++NG+ L + I+ NWA + + ++ + +
Sbjct: 100 IKKAEAESAINAMNGQWLGSRSIRTNWATRKPPAPKSEANSKPMSFDEIYNQSSATNCTV 159
Query: 145 FVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLT 204
+ G ++ + + L F Y + RV + +G+ F+ F ++ A AI +
Sbjct: 160 YCGGITNGLCEDLLQKTFLPYGIIQEIRVF------KEKGYAFIRFSTKESATHAIVGVH 213
Query: 205 GKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGS 243
+G + ++C+W + N +S A + + G+
Sbjct: 214 NSEIGGQTVKCSWGKESGDPNNAPAASQALTSTQYPYGA 252
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 56/111 (50%), Gaps = 12/111 (10%)
Query: 249 ETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRD------KGF 302
+ +NT + N ++ ++VG+L+PE+ L F + G I + RV RD KG+
Sbjct: 37 QNSNTPSSNNKAEHHHIFVGDLSPEIETQTLREAFAAFGE--ISDCRVVRDPQTLKSKGY 94
Query: 303 GFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGS-KPTPPGTSSNPLP 352
GFV + AEA AI N +L + ++ +W + KP P + +N P
Sbjct: 95 GFVSFIKKAEAESAI---NAMNGQWLGSRSIRTNWATRKPPAPKSEANSKP 142
>gi|449469386|ref|XP_004152401.1| PREDICTED: polyadenylate-binding protein RBP47B'-like [Cucumis
sativus]
Length = 422
Score = 138 bits (348), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 96/296 (32%), Positives = 156/296 (52%), Gaps = 21/296 (7%)
Query: 56 CRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS----YGFIHYFDRRSAAMAI 111
R++++G++ V E L F+ TG V K+IR + YGF+ + +A +
Sbjct: 19 VRTLWIGDLQYWVDESYLNSCFAHTGEVISIKIIRNKITGQPEGYGFVEFVSHAAAERIL 78
Query: 112 LSLNGRHLFG--QPIKVNWA-YASGQREDTSG-HFNIFVGDLSPEVTDATLFACFSV-YP 166
+ NG + G Q ++NWA + G+R +G +IFVGDL+P+VTD L F YP
Sbjct: 79 QTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDLAPDVTDYLLQETFRAQYP 138
Query: 167 SCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNE 226
S A+V+ D TGRS+G+GFV F ++ + A++++ G + +R +R + AT
Sbjct: 139 SVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYCSTRPMRISAATPKKTIGV 198
Query: 227 DKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSL 286
+Q S K++ + ++ + +A NN TT++VGNL P +T+ +L + F L
Sbjct: 199 QQQYSLGKAMYPVPAYTTSVPVLPADYDA--NN---TTIFVGNLDPNITEEELKQTF--L 251
Query: 287 GAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQ-MKCSWGSKP 341
G I V++ KG GFV++ T A A AIQ + G+Q ++ SWG P
Sbjct: 252 QFGEIAYVKIPAGKGCGFVQFGTRASAEEAIQ----KMQGKIIGQQVVRTSWGRNP 303
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 88/201 (43%), Gaps = 38/201 (18%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGP-VEGCKLIRKDKSS----YGFIHYFDRRSAAMAIL 112
S++VG++ VT+ LLQE F + P V G K++ + YGF+ + D A+
Sbjct: 114 SIFVGDLAPDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMS 173
Query: 113 SLNGRHLFGQPIKVNWA-----------YASGQR----------------EDTSGHFNIF 145
+NG + +P++++ A Y+ G+ + + + IF
Sbjct: 174 EMNGVYCSTRPMRISAATPKKTIGVQQQYSLGKAMYPVPAYTTSVPVLPADYDANNTTIF 233
Query: 146 VGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTG 205
VG+L P +T+ L F + + ++ +G GFV F + A+ AI + G
Sbjct: 234 VGNLDPNITEEELKQTFLQFGEIAYVKIP------AGKGCGFVQFGTRASAEEAIQKMQG 287
Query: 206 KWLGSRQIRCNWATKGAGNNE 226
K +G + +R +W A +
Sbjct: 288 KIIGQQVVRTSWGRNPAAKQD 308
>gi|328792887|ref|XP_624017.2| PREDICTED: nucleolysin TIA-1 isoform p40-like isoform 1 [Apis
mellifera]
Length = 367
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 77/204 (37%), Positives = 116/204 (56%), Gaps = 20/204 (9%)
Query: 137 DTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDA 196
+ S H++IFVGDLSPE+ TL F+ + SD RV+ D +T +S+G+GFVSF + +A
Sbjct: 50 NKSEHYHIFVGDLSPEIETQTLREAFAPFGEISDCRVVRDPQTLKSKGYGFVSFVKKAEA 109
Query: 197 QSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAP 256
+SAI + G+WLGSR IR NWAT+ + + ++ + E+ N SS
Sbjct: 110 ESAIGAMNGQWLGSRSIRTNWATRKPPAPKSEANAKPLTFDEVYNQSS------------ 157
Query: 257 ENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALA 316
P TVY G L +T+ + + F G+ I+E+RV +DKG+ F+R+ST A A
Sbjct: 158 ---PTNCTVYCGGLTNGLTEELMQKTFSPFGS--IQEIRVFKDKGYAFIRFSTKESATHA 212
Query: 317 IQMGNTTQSSYLFGKQMKCSWGSK 340
I + T + G+ +KCSWG +
Sbjct: 213 IVAVHNTD---INGQTVKCSWGKE 233
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/198 (21%), Positives = 90/198 (45%), Gaps = 27/198 (13%)
Query: 59 VYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKS----SYGFIHYFDRRSAAMAILSL 114
++VG++ ++ L+E F+ G + C+++R ++ YGF+ + + A AI ++
Sbjct: 57 IFVGDLSPEIETQTLREAFAPFGEISDCRVVRDPQTLKSKGYGFVSFVKKAEAESAIGAM 116
Query: 115 NGRHLFGQPIKVNWA-----------------YASGQREDTSGHFNIFVGDLSPEVTDAT 157
NG+ L + I+ NWA + + + + ++ G L+ +T+
Sbjct: 117 NGQWLGSRSIRTNWATRKPPAPKSEANAKPLTFDEVYNQSSPTNCTVYCGGLTNGLTEEL 176
Query: 158 LFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNW 217
+ FS + S + RV D +G+ F+ F ++ A AI + + + ++C+W
Sbjct: 177 MQKTFSPFGSIQEIRVFKD------KGYAFIRFSTKESATHAIVAVHNTDINGQTVKCSW 230
Query: 218 ATKGAGNNEDKQSSDAKS 235
+ N +Q+ A S
Sbjct: 231 GKESGDPNNAQQTGQALS 248
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 50/102 (49%), Gaps = 12/102 (11%)
Query: 258 NNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRD------KGFGFVRYSTHA 311
N ++ ++VG+L+PE+ L F G I + RV RD KG+GFV + A
Sbjct: 50 NKSEHYHIFVGDLSPEIETQTLREAFAPFGE--ISDCRVVRDPQTLKSKGYGFVSFVKKA 107
Query: 312 EAALAIQMGNTTQSSYLFGKQMKCSWGS-KPTPPGTSSNPLP 352
EA AI N +L + ++ +W + KP P + +N P
Sbjct: 108 EAESAIGAMN---GQWLGSRSIRTNWATRKPPAPKSEANAKP 146
>gi|224104133|ref|XP_002313332.1| predicted protein [Populus trichocarpa]
gi|222849740|gb|EEE87287.1| predicted protein [Populus trichocarpa]
Length = 415
Score = 138 bits (347), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 95/301 (31%), Positives = 151/301 (50%), Gaps = 33/301 (10%)
Query: 56 CRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS----YGFIHYFDRRSAAMAI 111
R++++G++ E L F+ TG V K+IR + YGF+ + +A +
Sbjct: 19 VRTLWIGDLQYWADESYLTSCFAHTGEVVSIKIIRNKLTGQPEGYGFVEFVSHAAAERIL 78
Query: 112 LSLNGRHLFG--QPIKVNWA-YASGQREDTSG-HFNIFVGDLSPEVTDATLFACFSV-YP 166
+ NG + G Q ++NWA + G+R +G +IFVGDL+P+VTD L F V YP
Sbjct: 79 QTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDLAPDVTDYLLQETFRVHYP 138
Query: 167 SCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNE 226
S A+V+ D TGRS+G+GFV F ++ + A+ ++ G + +R +R + AT +
Sbjct: 139 SVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMTEMNGVFCSTRPMRISMATPKKTTSF 198
Query: 227 DKQSSDAKSVVEL------TNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLH 280
+Q + K+ S DG T TT++VGNL P T+ DL
Sbjct: 199 QQQYAVPKAFYPAPAYTAPVQVVSADGDVTN-----------TTIFVGNLDPNATEEDLR 247
Query: 281 RHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQ-MKCSWGS 339
+ F LG I V++ +G GFV+++T A AIQ ++ G+Q ++ SWG
Sbjct: 248 QTFLQLGE--IASVKIPAGRGCGFVQFATRTSAEEAIQR----MQGHVIGQQPVRISWGK 301
Query: 340 K 340
K
Sbjct: 302 K 302
>gi|84468322|dbj|BAE71244.1| putative DNA binding protein [Trifolium pratense]
Length = 402
Score = 138 bits (347), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 99/306 (32%), Positives = 155/306 (50%), Gaps = 31/306 (10%)
Query: 56 CRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS----YGFIHYFDRRSAAMAI 111
R++++G++ + E L F +TG V K+IR ++S YGFI + R SA +
Sbjct: 56 VRTLWIGDLQYWMDENYLYTCFGNTGEVTSVKVIRNKQTSQSEGYGFIEFNTRASAERVL 115
Query: 112 LSLNGRHL--FGQPIKVNWA-YASGQR---EDTSGHFNIFVGDLSPEVTDATLFACFSV- 164
+ G + GQ ++NWA +++G+R +D IFVGDL+ +VTD L F
Sbjct: 116 QTYQGAIMPNGGQSYRLNWATFSAGERSSRQDDGPDHTIFVGDLAADVTDYLLQETFRAR 175
Query: 165 YPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGN 224
Y S A+V+ D+ TGRS+G+GFV F ++ + A+ ++ G +R +R AT N
Sbjct: 176 YNSVKGAKVVIDRLTGRSKGYGFVRFADEGEQMRAMTEMQGVLCSTRPMRIGPAT----N 231
Query: 225 NEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFH 284
++ AK+ T G EN+P TT++VGNL P VT L + F
Sbjct: 232 KNPAATTQAKASYSNTPGGQS-----------ENDPNNTTIFVGNLDPNVTDDHLRQVFS 280
Query: 285 SLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSKPTPP 344
G V V++ K GFV++S + A AI++ N T L G+ ++ SWG P+
Sbjct: 281 QYGELV--HVKIPSGKRCGFVQFSDRSSAEEAIRVLNGT---LLGGQNVRLSWGRTPSNK 335
Query: 345 GTSSNP 350
T +P
Sbjct: 336 QTQQDP 341
>gi|449513289|ref|XP_004164285.1| PREDICTED: LOW QUALITY PROTEIN: polyadenylate-binding protein
RBP47B'-like [Cucumis sativus]
Length = 427
Score = 138 bits (347), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 96/300 (32%), Positives = 153/300 (51%), Gaps = 24/300 (8%)
Query: 56 CRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS----YGFIHYFDRRSAAMAI 111
R++++G++ V E L F+ TG V K+IR + YGF+ + +A +
Sbjct: 19 VRTLWIGDLQYWVDESYLNSCFAHTGEVISIKIIRNKITGQPEGYGFVEFVSHAAAERIL 78
Query: 112 LSLNGRHLFG--QPIKVNWA-YASGQREDTSG-HFNIFVGDLSPEVTDATLFACFSV-YP 166
+ NG + G Q ++NWA + G+R +G +IFVGDL+P+VTD L F YP
Sbjct: 79 QTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDLAPDVTDYLLQETFRAQYP 138
Query: 167 SCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNE 226
S A+V+ D TGRS+G+GFV F ++ + A++++ G + +R +R + AT +
Sbjct: 139 SVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGXYCSTRPMRISAATP----KK 194
Query: 227 DKQSSDAKSVVELTNGSSEDGKETTNTEAP----ENNPQYTTVYVGNLAPEVTQLDLHRH 282
S V++ N S T P + + TT++VGNL P +T+ +L +
Sbjct: 195 PLVFSSNTVXVKVMNNESMYPVPAYTTSVPVLPADYDANNTTIFVGNLDPNITEEELKQT 254
Query: 283 FHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQ-MKCSWGSKP 341
F L G I V++ KG GFV++ T A A AIQ + G+Q ++ SWG P
Sbjct: 255 F--LQFGEIAYVKIPAGKGCGFVQFGTRASAEEAIQ----KMQGKIIGQQVVRTSWGRNP 308
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 87/206 (42%), Gaps = 43/206 (20%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGP-VEGCKLIRKDKSS----YGFIHYFDRRSAAMAIL 112
S++VG++ VT+ LLQE F + P V G K++ + YGF+ + D A+
Sbjct: 114 SIFVGDLAPDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMS 173
Query: 113 SLNGRHLFGQPIKVNWA-------YASGQ-------------------------REDTSG 140
+NG + +P++++ A ++S + +
Sbjct: 174 EMNGXYCSTRPMRISAATPKKPLVFSSNTVXVKVMNNESMYPVPAYTTSVPVLPADYDAN 233
Query: 141 HFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAI 200
+ IFVG+L P +T+ L F + + ++ +G GFV F + A+ AI
Sbjct: 234 NTTIFVGNLDPNITEEELKQTFLQFGEIAYVKIP------AGKGCGFVQFGTRASAEEAI 287
Query: 201 NDLTGKWLGSRQIRCNWATKGAGNNE 226
+ GK +G + +R +W A +
Sbjct: 288 QKMQGKIIGQQVVRTSWGRNPAAKQD 313
Score = 39.7 bits (91), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 45/93 (48%), Gaps = 3/93 (3%)
Query: 47 LPPGFDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSSYGFIHYFDRRS 106
LP +D + +++VGN+ +TE L++ F G + K+ GF+ + R S
Sbjct: 226 LPADYDANNT-TIFVGNLDPNITEEELKQTFLQFGEIAYVKI--PAGKGCGFVQFGTRAS 282
Query: 107 AAMAILSLNGRHLFGQPIKVNWAYASGQREDTS 139
A AI + G+ + Q ++ +W ++D +
Sbjct: 283 AEEAIQKMQGKIIGQQVVRTSWGRNPAAKQDLT 315
>gi|356541997|ref|XP_003539458.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
isoform 2 [Glycine max]
Length = 392
Score = 137 bits (346), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 92/294 (31%), Positives = 152/294 (51%), Gaps = 21/294 (7%)
Query: 56 CRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS----YGFIHYFDRRSAAMAI 111
R++++G++ V E L + F+ +G V K+IR + YGF+ + SA +
Sbjct: 9 VRTLWIGDLQYWVDESYLSQCFAHSGEVVSIKIIRNKLTGQPEGYGFVEFVSHASAEAFL 68
Query: 112 LSLNGRHLFG--QPIKVNWAYASGQREDTSGHFNIFVGDLSPEVTDATLFACFSV-YPSC 168
+ NG + G Q ++NWA D+ +IFVGDL+P+VTD L F YPS
Sbjct: 69 RTFNGAQMPGTDQTFRLNWA----SFGDSGPDHSIFVGDLAPDVTDFILQETFRAHYPSV 124
Query: 169 SDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDK 228
++V+ D TGRS+G+GFV F ++ A+ ++ G + +R +R + AT +
Sbjct: 125 KGSKVVTDPATGRSKGYGFVKFADEAQRNRAMTEMNGVYCSTRPMRISAATPKKNASFQH 184
Query: 229 QSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGA 288
Q + K++ + ++ +T APEN+ TTV +GNL VT+ +L + F G
Sbjct: 185 QYAPPKAMYQFPAYTAP-----VSTVAPENDVNNTTVCIGNLDLNVTEEELKQAFVQFGD 239
Query: 289 GVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSKPT 342
V+ V++ KG+G+V++ T A A AIQ Q + + ++ SWGS T
Sbjct: 240 IVL--VKIYAGKGYGYVQFGTRASAEDAIQ---RMQGKVIGQQVIQISWGSTLT 288
Score = 38.5 bits (88), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 43/90 (47%), Gaps = 2/90 (2%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSSYGFIHYFDRRSAAMAILSLNGR 117
+V +GN+ VTE L++ F G + K+ YG++ + R SA AI + G+
Sbjct: 215 TVCIGNLDLNVTEEELKQAFVQFGDIVLVKIYAG--KGYGYVQFGTRASAEDAIQRMQGK 272
Query: 118 HLFGQPIKVNWAYASGQREDTSGHFNIFVG 147
+ Q I+++W R+ ++ + G
Sbjct: 273 VIGQQVIQISWGSTLTARQMDPSQWSAYYG 302
>gi|356521484|ref|XP_003529385.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
[Glycine max]
Length = 431
Score = 137 bits (346), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 99/300 (33%), Positives = 161/300 (53%), Gaps = 26/300 (8%)
Query: 56 CRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS----YGFIHYFDRRSAAMAI 111
R+V++G++H + E L F+ TG V K+IR ++ YGF+ ++ R +A +
Sbjct: 100 IRTVWLGDLHHWMDENYLHNCFAHTGEVVSAKVIRNKQTGQSEGYGFVEFYSRATAEKVL 159
Query: 112 LSLNGRHL--FGQPIKVNWA-YASGQRE--DTSGHFNIFVGDLSPEVTDATLFACFS-VY 165
+ NG + Q ++NWA +++G+R D + +IFVGDL+ +VTDA L F+ Y
Sbjct: 160 QNYNGTMMPNTDQAFRLNWATFSAGERRSSDATSDLSIFVGDLAIDVTDAMLQETFAGRY 219
Query: 166 PSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT-KGAGN 224
S A+V+ D TGRS+G+GFV F ++ + A+ ++ G + SR +R AT K
Sbjct: 220 SSIKGAKVVIDSNTGRSKGYGFVRFGDENERTRAMTEMNGVYCSSRPMRIGVATPKKTYG 279
Query: 225 NEDKQSSDAKSVVELTNGSSEDG--KETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRH 282
+ + SS A V L G + +G + +++E NN TT++VG L + + DL +
Sbjct: 280 YQQQYSSQA---VLLAGGHAANGAVAQGSHSEGDLNN---TTIFVGGLDSDTSDEDLRQP 333
Query: 283 FHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQ-MKCSWGSKP 341
F L G + V++ KG GFV+++ A AI N T + GKQ ++ SWG P
Sbjct: 334 F--LQFGEVVSVKIPVGKGCGFVQFADRKNAEEAIHALNGT----VIGKQTVRLSWGRSP 387
Score = 40.0 bits (92), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 49/89 (55%), Gaps = 7/89 (7%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKL-IRKDKSSYGFIHYFDRRSAAMAILSLNG 116
+++VG + + ++ L++ F G V K+ + K GF+ + DR++A AI +LNG
Sbjct: 315 TIFVGGLDSDTSDEDLRQPFLQFGEVVSVKIPVGK---GCGFVQFADRKNAEEAIHALNG 371
Query: 117 RHLFGQPIKVNWAYASGQ---REDTSGHF 142
+ Q ++++W + G R D++G +
Sbjct: 372 TVIGKQTVRLSWGRSPGNKHWRSDSNGGY 400
>gi|15222783|ref|NP_175383.1| RNA-binding protein 47A [Arabidopsis thaliana]
gi|378522727|sp|F4I3B3.1|RB47A_ARATH RecName: Full=Polyadenylate-binding protein RBP47A;
Short=Poly(A)-binding protein RBP47A; AltName:
Full=RNA-binding protein 47A; Short=AtRBP47A
gi|332194327|gb|AEE32448.1| RNA-binding protein 47A [Arabidopsis thaliana]
Length = 445
Score = 137 bits (346), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 98/300 (32%), Positives = 158/300 (52%), Gaps = 31/300 (10%)
Query: 56 CRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKS----SYGFIHYFDRRSAAMAI 111
++++VG++ + E L FS T V K+IR ++ YGF+ + R +A A+
Sbjct: 118 VKTLWVGDLLHWMDETYLHTCFSHTNEVSSVKVIRNKQTCQSEGYGFVEFLSRSAAEEAL 177
Query: 112 LSLNGRHL--FGQPIKVNWA-YASGQREDTSG--HFNIFVGDLSPEVTDATLFACFS-VY 165
S +G + QP ++NWA +++G++ + +IFVGDL+P+V+DA L F+ Y
Sbjct: 178 QSFSGVTMPNAEQPFRLNWASFSTGEKRASENGPDLSIFVGDLAPDVSDAVLLETFAGRY 237
Query: 166 PSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT-KGAGN 224
PS A+V+ D TGRS+G+GFV F ++ + A+ ++ G + SRQ+R AT K A
Sbjct: 238 PSVKGAKVVIDSNTGRSKGYGFVRFGDENERSRAMTEMNGAFCSSRQMRVGIATPKRAAA 297
Query: 225 NEDKQSSDAKSVV--ELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRH 282
+ S A ++ NGS DG E+ N +T++VG L +VT+ DL +
Sbjct: 298 YGQQNGSQALTLAGGHGGNGSMSDG-ESNN----------STIFVGGLDADVTEEDLMQP 346
Query: 283 FHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQ-MKCSWGSKP 341
F G + V++ KG GFV+++ A AI N T + GK ++ SWG P
Sbjct: 347 FSDFGE--VVSVKIPVGKGCGFVQFANRQSAEEAIGNLNGT----VIGKNTVRLSWGRSP 400
>gi|224067280|ref|XP_002302445.1| predicted protein [Populus trichocarpa]
gi|222844171|gb|EEE81718.1| predicted protein [Populus trichocarpa]
Length = 429
Score = 137 bits (346), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 93/295 (31%), Positives = 154/295 (52%), Gaps = 28/295 (9%)
Query: 57 RSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS----YGFIHYFDRRSAAMAIL 112
+++ +G++H + E L F+STG + K+IR ++ YGF+ +F +A +
Sbjct: 96 KTICIGDLHHWMDENYLHTCFASTGEIASIKVIRSKQTGLSEGYGFVEFFTHATAEKVLQ 155
Query: 113 SLNGRHL--FGQPIKVNWA-YASG-QREDTSGHFNIFVGDLSPEVTDATLFACF-SVYPS 167
+ G + QP ++NWA +++G +R D + +IFVGDL+ +VTD+ L F S Y S
Sbjct: 156 NYGGILMPNTEQPFRLNWATFSTGDKRSDNTPDLSIFVGDLAADVTDSLLQETFASKYQS 215
Query: 168 CSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNED 227
A+V++D TGRS+G+GFV F + + A+ ++ G + SR +R AT +
Sbjct: 216 VKSAKVVFDANTGRSKGYGFVRFGDDTERTQAMTEMNGVYCSSRPMRIGAATPRKSSGYQ 275
Query: 228 KQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLG 287
+Q +NG+S G ++ + + T++VG L P VT DL + F G
Sbjct: 276 QQGGYG------SNGASSQGFQS------DGDSSNATIFVGGLDPNVTDEDLKQPFSQYG 323
Query: 288 AGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQ-MKCSWGSKP 341
I V++ KG GFV+++ A A+Q N T + GKQ ++ SWG P
Sbjct: 324 E--IVSVKIPVSKGCGFVQFANRNNAEEALQKLNGT----VIGKQTVRLSWGRNP 372
Score = 39.7 bits (91), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 21/83 (25%), Positives = 43/83 (51%), Gaps = 2/83 (2%)
Query: 54 STCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSSYGFIHYFDRRSAAMAILS 113
S+ +++VG + VT+ L++ FS G + K+ GF+ + +R +A A+
Sbjct: 296 SSNATIFVGGLDPNVTDEDLKQPFSQYGEIVSVKIPVSKGC--GFVQFANRNNAEEALQK 353
Query: 114 LNGRHLFGQPIKVNWAYASGQRE 136
LNG + Q ++++W G ++
Sbjct: 354 LNGTVIGKQTVRLSWGRNPGHKQ 376
>gi|356541995|ref|XP_003539457.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
isoform 1 [Glycine max]
Length = 401
Score = 137 bits (345), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 92/294 (31%), Positives = 152/294 (51%), Gaps = 21/294 (7%)
Query: 56 CRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS----YGFIHYFDRRSAAMAI 111
R++++G++ V E L + F+ +G V K+IR + YGF+ + SA +
Sbjct: 9 VRTLWIGDLQYWVDESYLSQCFAHSGEVVSIKIIRNKLTGQPEGYGFVEFVSHASAEAFL 68
Query: 112 LSLNGRHLFG--QPIKVNWAYASGQREDTSGHFNIFVGDLSPEVTDATLFACFSV-YPSC 168
+ NG + G Q ++NWA D+ +IFVGDL+P+VTD L F YPS
Sbjct: 69 RTFNGAQMPGTDQTFRLNWA----SFGDSGPDHSIFVGDLAPDVTDFILQETFRAHYPSV 124
Query: 169 SDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDK 228
++V+ D TGRS+G+GFV F ++ A+ ++ G + +R +R + AT +
Sbjct: 125 KGSKVVTDPATGRSKGYGFVKFADEAQRNRAMTEMNGVYCSTRPMRISAATPKKNASFQH 184
Query: 229 QSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGA 288
Q + K++ + ++ +T APEN+ TTV +GNL VT+ +L + F G
Sbjct: 185 QYAPPKAMYQFPAYTAP-----VSTVAPENDVNNTTVCIGNLDLNVTEEELKQAFVQFGD 239
Query: 289 GVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSKPT 342
V+ V++ KG+G+V++ T A A AIQ Q + + ++ SWGS T
Sbjct: 240 IVL--VKIYAGKGYGYVQFGTRASAEDAIQ---RMQGKVIGQQVIQISWGSTLT 288
Score = 41.6 bits (96), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 41/83 (49%), Gaps = 2/83 (2%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSSYGFIHYFDRRSAAMAILSLNGR 117
+V +GN+ VTE L++ F G + K+ YG++ + R SA AI + G+
Sbjct: 215 TVCIGNLDLNVTEEELKQAFVQFGDIVLVKIYAG--KGYGYVQFGTRASAEDAIQRMQGK 272
Query: 118 HLFGQPIKVNWAYASGQREDTSG 140
+ Q I+++W R+D G
Sbjct: 273 VIGQQVIQISWGSTLTARQDVPG 295
>gi|255555523|ref|XP_002518798.1| nuclear acid binding protein, putative [Ricinus communis]
gi|223542179|gb|EEF43723.1| nuclear acid binding protein, putative [Ricinus communis]
Length = 438
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 96/297 (32%), Positives = 153/297 (51%), Gaps = 24/297 (8%)
Query: 57 RSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS----YGFIHYFDRRSAAMAIL 112
++++VG++ + E L FS TG V K+IR ++ YGFI ++ +A +
Sbjct: 106 KTIWVGDLLHWMDETYLHSCFSHTGEVTSVKVIRNKQTGQPEGYGFIEFYSHATAEKVLQ 165
Query: 113 SLNGRHL--FGQPIKVNWA-YASGQREDTSGHFNIFVGDLSPEVTDATLFACFSV-YPSC 168
+ NG + QP ++NWA +A +R +T +IFVGDL+ +VTDA L FS Y S
Sbjct: 166 NYNGSMMPNADQPFRLNWASFAGERRTETGSDLSIFVGDLAADVTDAMLQETFSSKYLSV 225
Query: 169 SDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDK 228
A+V+ D TGRS+G+GFV F ++ + A+ ++ G + SR +R AT +
Sbjct: 226 KGAKVVTDLNTGRSKGYGFVRFGDENERSRAMMEMNGVYCSSRPMRIGVATPKKSPAYQQ 285
Query: 229 QSSDAKSVV---ELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHS 285
Q S V+ NGS G + ++ NN TT++VG + +++ DL + F
Sbjct: 286 QYSSQALVLAGGHAPNGSMAQGSQ---SDGDSNN---TTIFVGGIDSDISDEDLRQPFSQ 339
Query: 286 LGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQ-MKCSWGSKP 341
G + V++ KG GFV+++ A A+Q N T GKQ ++ SWG P
Sbjct: 340 FGE--VVSVKIPAGKGCGFVQFADRKSAEDALQSLNGT----TIGKQTVRLSWGRSP 390
Score = 45.8 bits (107), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 47/90 (52%), Gaps = 2/90 (2%)
Query: 54 STCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSSYGFIHYFDRRSAAMAILS 113
S +++VG I + +++ L++ FS G V K+ GF+ + DR+SA A+ S
Sbjct: 314 SNNTTIFVGGIDSDISDEDLRQPFSQFGEVVSVKI--PAGKGCGFVQFADRKSAEDALQS 371
Query: 114 LNGRHLFGQPIKVNWAYASGQREDTSGHFN 143
LNG + Q ++++W + ++ H N
Sbjct: 372 LNGTTIGKQTVRLSWGRSPANKQWRGDHNN 401
>gi|365192966|gb|AEW68341.1| putative nuclear acid binding protein [Medicago sativa]
Length = 409
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 99/327 (30%), Positives = 167/327 (51%), Gaps = 31/327 (9%)
Query: 34 LAAPQIEPIP-SGNLPPGFDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKD 92
+ AP +P S +PP +++++G++ + E L FS TG V K+IR
Sbjct: 49 MWAPNTQPPQQSA-VPPPTSADEVKTLWIGDLQYWMDENYLYNCFSHTGEVGSVKVIRNK 107
Query: 93 KSS----YGFIHYFDRRSAAMAILSLNGRHL--FGQPIKVNWA-YASGQ-REDTSGHFNI 144
++ YGF+ + R A + + NG + GQ ++NWA ++SG+ R D S + I
Sbjct: 108 LNNQSEGYGFLEFISRAGAERVLQTYNGTIMPNGGQNFRLNWATFSSGEKRHDDSPDYTI 167
Query: 145 FVGDLSPEVTDATLFACFSV-YPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDL 203
FVGDL+ +V+D L F Y S A+V+ D+ TGRS+G+GFV F ++ + A+ ++
Sbjct: 168 FVGDLAADVSDHHLTEVFRTRYNSVKGAKVVIDRNTGRSKGYGFVRFADESEQMRAMTEM 227
Query: 204 TGKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYT 263
G +R +R G +N++ + +K+ + G +++ EN+P T
Sbjct: 228 QGVLCSTRPMRI-----GPASNKNLGTQTSKASYQNPQGGAQN----------ENDPNNT 272
Query: 264 TVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTT 323
T++VGNL P VT L + F G V V++ K GFV+++ + A A+++ N T
Sbjct: 273 TIFVGNLDPNVTDEHLKQVFTQYGELV--HVKIPSGKRCGFVQFADRSSAEEALRVLNGT 330
Query: 324 QSSYLFGKQMKCSWGSKPTPPGTSSNP 350
L G+ ++ SWG P T +P
Sbjct: 331 ---LLGGQNVRLSWGRSPANKQTQQDP 354
>gi|357475467|ref|XP_003608019.1| RNA Binding Protein [Medicago truncatula]
gi|355509074|gb|AES90216.1| RNA Binding Protein [Medicago truncatula]
Length = 454
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 97/306 (31%), Positives = 158/306 (51%), Gaps = 27/306 (8%)
Query: 53 PSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS----YGFIHYFDRRSAA 108
P R++++G++H + E L F+ TG V K+IR ++ YGF+ ++ R A
Sbjct: 112 PEEIRTIWLGDLHHWMDETFLHNCFAHTGEVASAKVIRNKQTGQSEGYGFVEFYTRAMAE 171
Query: 109 MAILSLNGRHL--FGQPIKVNWAYAS-----GQRE--DTSGHFNIFVGDLSPEVTDATLF 159
+ + NG + Q ++NWA S G+R + + ++FVGDL+ +VTDA L
Sbjct: 172 KVLQNFNGTMMPNTDQAFRLNWATFSAAGGGGERRSSEATSDLSVFVGDLAIDVTDAMLQ 231
Query: 160 ACF-SVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWA 218
F S + S A+V+ D TGRS+G+GFV F ++ + A+ ++ G + SR +R A
Sbjct: 232 ETFASKFSSIKGAKVVIDSNTGRSKGYGFVRFGDESERTRAMTEMNGVYCSSRPMRVGVA 291
Query: 219 T--KGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQ 276
T K GN Q +++VV G +G +++ E + TT++VG L +++
Sbjct: 292 TPKKTYGN---PQQYSSQAVVLAGGGGHSNGAMAQGSQS-EGDSNNTTIFVGGLDSDISD 347
Query: 277 LDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQ-MKC 335
DL + F L G + V++ KG GFV+ + A AIQ N T + GKQ ++
Sbjct: 348 EDLRQPF--LQFGDVISVKIPVGKGCGFVQLADRKNAEEAIQGLNGT----VIGKQTVRL 401
Query: 336 SWGSKP 341
SWG P
Sbjct: 402 SWGRSP 407
Score = 38.9 bits (89), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 44/83 (53%), Gaps = 4/83 (4%)
Query: 54 STCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKL-IRKDKSSYGFIHYFDRRSAAMAIL 112
S +++VG + + +++ L++ F G V K+ + K GF+ DR++A AI
Sbjct: 331 SNNTTIFVGGLDSDISDEDLRQPFLQFGDVISVKIPVGK---GCGFVQLADRKNAEEAIQ 387
Query: 113 SLNGRHLFGQPIKVNWAYASGQR 135
LNG + Q ++++W + G +
Sbjct: 388 GLNGTVIGKQTVRLSWGRSPGNK 410
>gi|218192181|gb|EEC74608.1| hypothetical protein OsI_10216 [Oryza sativa Indica Group]
Length = 416
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 90/296 (30%), Positives = 153/296 (51%), Gaps = 20/296 (6%)
Query: 56 CRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS----YGFIHYFDRRSAAMAI 111
R++++G++ E L F+ TG ++ K+IR +S YGFI + A +
Sbjct: 15 VRTLWIGDLQYWADENYLYNCFAHTGELQSVKIIRNKLTSLPEGYGFIEFISHEVAEKVL 74
Query: 112 LSLNGRHLFG--QPIKVNWA-YASGQREDTSG-HFNIFVGDLSPEVTDATLFACFSV-YP 166
+ NG + G ++NWA ++SG+R +G +IFVGDL+P+VTD L F V YP
Sbjct: 75 QTYNGTQMPGTEHTFRLNWASFSSGERRPDAGPDHSIFVGDLAPDVTDYLLQETFRVSYP 134
Query: 167 SCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNE 226
S A+V+ D TGRS+G+GFV F ++ + A+ ++ G + +R +R + A
Sbjct: 135 SVKGAKVVTDPNTGRSKGYGFVKFADENEKNRAMTEMNGMYCSTRPMRISAAIPKKTTGS 194
Query: 227 DKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSL 286
Q AK++ + + P+++P TT+++GNL VT+ +L +
Sbjct: 195 QLQYGAAKAMYPAAGYAVPQVQPVL----PDSDPTNTTIFIGNLDQNVTEDELRQICVQF 250
Query: 287 GAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQ-MKCSWGSKP 341
G + V++ +K GFV+Y++ A A A+Q + T G+Q ++ SWG P
Sbjct: 251 GELIY--VKIPANKACGFVQYASRASAEEAVQRLHGT----TIGQQVVRLSWGRSP 300
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 60/115 (52%), Gaps = 8/115 (6%)
Query: 26 QSLYHPGLLAAPQIEPIPSGNLPPGFDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEG 85
+++Y A PQ++P+ P DP T ++++GN+ VTE L+++ G +
Sbjct: 202 KAMYPAAGYAVPQVQPVL-----PDSDP-TNTTIFIGNLDQNVTEDELRQICVQFGELIY 255
Query: 86 CKLIRKDKSSYGFIHYFDRRSAAMAILSLNGRHLFGQPIKVNWAYASGQREDTSG 140
K I +K+ GF+ Y R SA A+ L+G + Q ++++W + ++D S
Sbjct: 256 VK-IPANKAC-GFVQYASRASAEEAVQRLHGTTIGQQVVRLSWGRSPASKQDQSA 308
>gi|297852632|ref|XP_002894197.1| hypothetical protein ARALYDRAFT_474095 [Arabidopsis lyrata subsp.
lyrata]
gi|297340039|gb|EFH70456.1| hypothetical protein ARALYDRAFT_474095 [Arabidopsis lyrata subsp.
lyrata]
Length = 450
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 98/300 (32%), Positives = 158/300 (52%), Gaps = 31/300 (10%)
Query: 56 CRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKS----SYGFIHYFDRRSAAMAI 111
++++VG++ + E L FS T V K+IR ++ YGF+ + R +A A+
Sbjct: 123 VKTLWVGDLLHWMDETYLHTCFSHTNEVSSVKVIRNKQTCQSEGYGFVEFLSRSAAEEAL 182
Query: 112 LSLNGRHL--FGQPIKVNWA-YASGQREDTSG--HFNIFVGDLSPEVTDATLFACFS-VY 165
S +G + QP ++NWA +++G++ + +IFVGDL+P+V+DA L F+ Y
Sbjct: 183 QSFSGVTMPNAEQPFRLNWASFSTGEKRASENGPDLSIFVGDLAPDVSDAVLLETFAGRY 242
Query: 166 PSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT-KGAGN 224
PS A+V+ D TGRS+G+GFV F ++ + A+ ++ G + SRQ+R AT K A
Sbjct: 243 PSVKGAKVVIDSNTGRSKGYGFVRFGDENERSRAMTEMNGAFCSSRQMRVGIATPKRAAA 302
Query: 225 NEDKQSSDAKSVV--ELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRH 282
+ S A ++ NGS DG E+ N +T++VG L +VT+ DL +
Sbjct: 303 YGQQNGSQALTLAGGHGGNGSLSDG-ESNN----------STIFVGGLDADVTEEDLMQP 351
Query: 283 FHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQ-MKCSWGSKP 341
F G + V++ KG GFV+++ A AI N T + GK ++ SWG P
Sbjct: 352 FSQFGE--VVSVKIPVGKGCGFVQFANRQSAEEAIGNLNGT----VIGKNTVRLSWGRSP 405
>gi|449470045|ref|XP_004152729.1| PREDICTED: polyadenylate-binding protein RBP47C-like [Cucumis
sativus]
gi|449496017|ref|XP_004160013.1| PREDICTED: polyadenylate-binding protein RBP47C-like [Cucumis
sativus]
Length = 429
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 111/374 (29%), Positives = 176/374 (47%), Gaps = 54/374 (14%)
Query: 2 QHQRLKQQQQQQQQALMQ---QALLQQQSLYHP-GLLAAPQIEPIPSGNLPP-------- 49
Q+Q+ +Q Q Q+ MQ A++ Q + P + P IP PP
Sbjct: 20 QNQQTHKQPQPQRWMAMQYPAAAMIMQHPMMPPQHYVPPPSPHYIPYRQYPPPHQLNGQQ 79
Query: 50 -----GFDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS----YGFIH 100
S ++++VG++ + E L F+STG + K+IR ++ YGF+
Sbjct: 80 HQQPHQGSTSENKTIWVGDLQHWMDENYLHSCFASTGEISSLKVIRNKQTGISEGYGFVE 139
Query: 101 YFDRRSAAM------AILSLNGRHLFGQPIKVNWA-YASG-QREDTSGHFNIFVGDLSPE 152
+F +A +IL N F ++NWA +++G +R + +IFVGDL+ +
Sbjct: 140 FFSHTTAEKVLQNYSSILMPNTEQAF----RLNWATFSTGDKRSENGSDLSIFVGDLAAD 195
Query: 153 VTDATLFACF-SVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSR 211
VTD+ L F S Y S A+V++D TG S+G+GFV F + + A+ ++ G + SR
Sbjct: 196 VTDSVLHETFASKYSSVKAAKVVYDPNTGCSKGYGFVRFGDDNERSQAMTEMNGIYCSSR 255
Query: 212 QIRCNWAT--KGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGN 269
+R AT K +G + S S ++G DG T TT+++G
Sbjct: 256 PMRIGAATPKKSSGYQQQYSSQGYASNGSFSHGHQSDGDFTN-----------TTIFIGG 304
Query: 270 LAPEVTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLF 329
L P VT DL + F G I V++ KG GF++++ A A+Q N T +
Sbjct: 305 LDPNVTDEDLKQLFSQHGE--IVSVKIPVGKGCGFIQFANRKNAEEALQKLNGT----VI 358
Query: 330 GKQ-MKCSWGSKPT 342
GKQ ++ SWG PT
Sbjct: 359 GKQTVRLSWGRSPT 372
>gi|388505308|gb|AFK40720.1| unknown [Medicago truncatula]
Length = 454
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 97/306 (31%), Positives = 158/306 (51%), Gaps = 27/306 (8%)
Query: 53 PSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS----YGFIHYFDRRSAA 108
P R++++G++H + E L F+ TG V K+IR ++ YGF+ ++ R A
Sbjct: 112 PEEIRTIWLGDLHHWMDETFLHNCFAHTGEVASAKVIRNKQTGQSEGYGFVEFYTRAMAE 171
Query: 109 MAILSLNGRHL--FGQPIKVNWAYAS-----GQRE--DTSGHFNIFVGDLSPEVTDATLF 159
+ + NG + Q ++NWA S G+R + + ++FVGDL+ +VTDA L
Sbjct: 172 KVLQNFNGTMMPNTDQAFRLNWATFSAAGGGGERRSSEATSDLSVFVGDLAIDVTDAMLQ 231
Query: 160 ACF-SVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWA 218
F S + S A+V+ D TGRS+G+GFV F ++ + A+ ++ G + SR +R A
Sbjct: 232 ETFASKFSSIKGAKVVIDSNTGRSKGYGFVRFGDESERTRAMTEMNGVYCSSRPMRVGVA 291
Query: 219 T--KGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQ 276
T K GN Q +++VV G +G +++ E + TT++VG L +++
Sbjct: 292 TPKKTYGN---PQQYSSQAVVLAGGGGHSNGAMAQGSQS-EGDSNNTTIFVGGLDSDISD 347
Query: 277 LDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQ-MKC 335
DL + F L G + V++ KG GFV+ + A AIQ N T + GKQ ++
Sbjct: 348 EDLRQPF--LQFGDVISVKIPVGKGCGFVQLADRKNAEEAIQGLNGT----VIGKQTVRL 401
Query: 336 SWGSKP 341
SWG P
Sbjct: 402 SWGRSP 407
Score = 38.5 bits (88), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 44/83 (53%), Gaps = 4/83 (4%)
Query: 54 STCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKL-IRKDKSSYGFIHYFDRRSAAMAIL 112
S +++VG + + +++ L++ F G V K+ + K GF+ DR++A AI
Sbjct: 331 SNNTTIFVGGLDSDISDEDLRQPFLQFGDVISVKIPVGK---GCGFVQLADRKNAEEAIQ 387
Query: 113 SLNGRHLFGQPIKVNWAYASGQR 135
LNG + Q ++++W + G +
Sbjct: 388 GLNGTVIGKQTVRLSWGRSPGNK 410
>gi|115451047|ref|NP_001049124.1| Os03g0174100 [Oryza sativa Japonica Group]
gi|113547595|dbj|BAF11038.1| Os03g0174100, partial [Oryza sativa Japonica Group]
Length = 438
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 90/296 (30%), Positives = 153/296 (51%), Gaps = 20/296 (6%)
Query: 56 CRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS----YGFIHYFDRRSAAMAI 111
R++++G++ E L F+ TG ++ K+IR +S YGFI + A +
Sbjct: 37 VRTLWIGDLQYWADENYLYNCFAHTGELQSVKIIRNKLTSLPEGYGFIEFISHEVAEKVL 96
Query: 112 LSLNGRHLFG--QPIKVNWA-YASGQREDTSG-HFNIFVGDLSPEVTDATLFACFSV-YP 166
+ NG + G ++NWA ++SG+R +G +IFVGDL+P+VTD L F V YP
Sbjct: 97 QTYNGTQMPGTEHTFRLNWASFSSGERRPDAGPDHSIFVGDLAPDVTDYLLQETFRVSYP 156
Query: 167 SCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNE 226
S A+V+ D TGRS+G+GFV F ++ + A+ ++ G + +R +R + A
Sbjct: 157 SVKGAKVVTDPNTGRSKGYGFVKFADENEKNRAMTEMNGMYCSTRPMRISAAIPKKTTGS 216
Query: 227 DKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSL 286
Q AK++ + + P+++P TT+++GNL VT+ +L +
Sbjct: 217 QLQYGAAKAMYPAAGYAVPQVQPVL----PDSDPTNTTIFIGNLDQNVTEDELRQICVQF 272
Query: 287 GAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQ-MKCSWGSKP 341
G + V++ +K GFV+Y++ A A A+Q + T G+Q ++ SWG P
Sbjct: 273 GELIY--VKIPANKACGFVQYASRASAEEAVQRLHGT----TIGQQVVRLSWGRSP 322
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 60/115 (52%), Gaps = 8/115 (6%)
Query: 26 QSLYHPGLLAAPQIEPIPSGNLPPGFDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEG 85
+++Y A PQ++P+ P DP T ++++GN+ VTE L+++ G +
Sbjct: 224 KAMYPAAGYAVPQVQPVL-----PDSDP-TNTTIFIGNLDQNVTEDELRQICVQFGELIY 277
Query: 86 CKLIRKDKSSYGFIHYFDRRSAAMAILSLNGRHLFGQPIKVNWAYASGQREDTSG 140
K I +K+ GF+ Y R SA A+ L+G + Q ++++W + ++D S
Sbjct: 278 VK-IPANKAC-GFVQYASRASAEEAVQRLHGTTIGQQVVRLSWGRSPASKQDQSA 330
>gi|108706453|gb|ABF94248.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|215694482|dbj|BAG89475.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 416
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 90/296 (30%), Positives = 153/296 (51%), Gaps = 20/296 (6%)
Query: 56 CRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS----YGFIHYFDRRSAAMAI 111
R++++G++ E L F+ TG ++ K+IR +S YGFI + A +
Sbjct: 15 VRTLWIGDLQYWADENYLYNCFAHTGELQSVKIIRNKLTSLPEGYGFIEFISHEVAEKVL 74
Query: 112 LSLNGRHLFG--QPIKVNWA-YASGQREDTSG-HFNIFVGDLSPEVTDATLFACFSV-YP 166
+ NG + G ++NWA ++SG+R +G +IFVGDL+P+VTD L F V YP
Sbjct: 75 QTYNGTQMPGTEHTFRLNWASFSSGERRPDAGPDHSIFVGDLAPDVTDYLLQETFRVSYP 134
Query: 167 SCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNE 226
S A+V+ D TGRS+G+GFV F ++ + A+ ++ G + +R +R + A
Sbjct: 135 SVKGAKVVTDPNTGRSKGYGFVKFADENEKNRAMTEMNGMYCSTRPMRISAAIPKKTTGS 194
Query: 227 DKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSL 286
Q AK++ + + P+++P TT+++GNL VT+ +L +
Sbjct: 195 QLQYGAAKAMYPAAGYAVPQVQPVL----PDSDPTNTTIFIGNLDQNVTEDELRQICVQF 250
Query: 287 GAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQ-MKCSWGSKP 341
G + V++ +K GFV+Y++ A A A+Q + T G+Q ++ SWG P
Sbjct: 251 GELIY--VKIPANKACGFVQYASRASAEEAVQRLHGT----TIGQQVVRLSWGRSP 300
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 60/115 (52%), Gaps = 8/115 (6%)
Query: 26 QSLYHPGLLAAPQIEPIPSGNLPPGFDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEG 85
+++Y A PQ++P+ P DP T ++++GN+ VTE L+++ G +
Sbjct: 202 KAMYPAAGYAVPQVQPVL-----PDSDP-TNTTIFIGNLDQNVTEDELRQICVQFGELIY 255
Query: 86 CKLIRKDKSSYGFIHYFDRRSAAMAILSLNGRHLFGQPIKVNWAYASGQREDTSG 140
K I +K+ GF+ Y R SA A+ L+G + Q ++++W + ++D S
Sbjct: 256 VK-IPANKAC-GFVQYASRASAEEAVQRLHGTTIGQQVVRLSWGRSPASKQDQSA 308
>gi|357113824|ref|XP_003558701.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
[Brachypodium distachyon]
Length = 418
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 92/306 (30%), Positives = 159/306 (51%), Gaps = 23/306 (7%)
Query: 49 PGFDPST---CRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS----YGFIHY 101
P P+T R++++G++ E L F+ TG V+ K+IR ++ YGFI +
Sbjct: 6 PYHQPTTLEEVRTLWIGDLQFWADEAYLYNCFAHTGEVQSVKIIRNKVTNLPEGYGFIEF 65
Query: 102 FDRRSAAMAILSLNGRHLFG--QPIKVNWA-YASGQREDTSG-HFNIFVGDLSPEVTDAT 157
+A + + NG + G ++NWA ++SG+R +G +IFVGDL+P+VTD
Sbjct: 66 ISHEAAEKVLQTYNGAQMPGSEHTFRLNWASFSSGERRPDAGPDHSIFVGDLAPDVTDYL 125
Query: 158 LFACFSV-YPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCN 216
L F V Y S A+V+ D TGRS+G+GFV F ++ + A++++ G + +R +R +
Sbjct: 126 LQETFRVNYSSVRGAKVVTDPNTGRSKGYGFVKFADENEKTRAMSEMNGVYCSTRPMRIS 185
Query: 217 WATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQ 276
A + Q AK++ + + P+++ TT+++GNL P T+
Sbjct: 186 AAIPKKSSGSQLQYGTAKAMYPAAAYAVPQAQPAL----PDSDLTNTTIFIGNLDPNATE 241
Query: 277 LDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQ-MKC 335
+L + G + V++ KG GFV+Y++ A A A+Q + T + G+Q ++
Sbjct: 242 EELRQLCVQFGELIY--VKIPVGKGCGFVQYASRASAEEAVQRLHGT----MIGQQVVRL 295
Query: 336 SWGSKP 341
SWG P
Sbjct: 296 SWGRSP 301
Score = 41.6 bits (96), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 55/116 (47%), Gaps = 10/116 (8%)
Query: 26 QSLYHPGLLAAPQIEP-IPSGNLPPGFDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVE 84
+++Y A PQ +P +P +L T ++++GN+ TE L+++ G +
Sbjct: 203 KAMYPAAAYAVPQAQPALPDSDL-------TNTTIFIGNLDPNATEEELRQLCVQFGELI 255
Query: 85 GCKLIRKDKSSYGFIHYFDRRSAAMAILSLNGRHLFGQPIKVNWAYASGQREDTSG 140
K+ GF+ Y R SA A+ L+G + Q ++++W + ++D S
Sbjct: 256 YVKI--PVGKGCGFVQYASRASAEEAVQRLHGTMIGQQVVRLSWGRSPANKQDQSA 309
>gi|356538950|ref|XP_003537963.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
isoform 2 [Glycine max]
Length = 392
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 92/294 (31%), Positives = 149/294 (50%), Gaps = 21/294 (7%)
Query: 56 CRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS----YGFIHYFDRRSAAMAI 111
R++++G++ V E L + F+ G V K+IR + YGF+ + SA +
Sbjct: 9 VRTLWIGDLQYWVDESYLSQCFAHNGEVVSIKIIRNKLTGQPEGYGFVEFVSHASAEAFL 68
Query: 112 LSLNGRHLFG--QPIKVNWAYASGQREDTSGHFNIFVGDLSPEVTDATLFACFSV-YPSC 168
+ NG + G Q ++NWA D+ +IFVGDL+P+VTD L F YPS
Sbjct: 69 RTYNGAQMPGTEQTFRLNWA----SFGDSGPDHSIFVGDLAPDVTDFLLQETFRAHYPSV 124
Query: 169 SDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDK 228
A+V+ D TGRS+G+GFV F ++ A+ ++ G + +R +R + AT +
Sbjct: 125 KGAKVVTDPATGRSKGYGFVKFADEAQRNRAMTEMNGVYCSTRPMRISAATPKKNASFQH 184
Query: 229 QSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGA 288
Q + K++ + S+ + APEN+ TTV +GNL VT+ +L + F G
Sbjct: 185 QYAPPKAMYQFPAYSAP-----VSAVAPENDVNNTTVCIGNLDLNVTEEELKQTFMQFGD 239
Query: 289 GVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSKPT 342
V+ V++ KG+G+V++ T A AIQ Q + + ++ SWGS T
Sbjct: 240 IVL--VKIYAGKGYGYVQFGTRVSAEDAIQ---RMQGKVIGQQVIQISWGSSMT 288
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 86/202 (42%), Gaps = 38/202 (18%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGP-VEGCKLIRKDKSS----YGFIHYFDRRSAAMAIL 112
S++VG++ VT+ LLQE F + P V+G K++ + YGF+ + D A+
Sbjct: 98 SIFVGDLAPDVTDFLLQETFRAHYPSVKGAKVVTDPATGRSKGYGFVKFADEAQRNRAMT 157
Query: 113 SLNGRHLFGQPIKVNWAY----ASGQR-----------------------EDTSGHFNIF 145
+NG + +P++++ A AS Q E+ + +
Sbjct: 158 EMNGVYCSTRPMRISAATPKKNASFQHQYAPPKAMYQFPAYSAPVSAVAPENDVNNTTVC 217
Query: 146 VGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTG 205
+G+L VT+ L F + ++ +G+G+V F + A+ AI + G
Sbjct: 218 IGNLDLNVTEEELKQTFMQFGDIVLVKIY------AGKGYGYVQFGTRVSAEDAIQRMQG 271
Query: 206 KWLGSRQIRCNWATKGAGNNED 227
K +G + I+ +W + D
Sbjct: 272 KVIGQQVIQISWGSSMTARQMD 293
Score = 38.9 bits (89), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 44/90 (48%), Gaps = 2/90 (2%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSSYGFIHYFDRRSAAMAILSLNGR 117
+V +GN+ VTE L++ F G + K+ YG++ + R SA AI + G+
Sbjct: 215 TVCIGNLDLNVTEEELKQTFMQFGDIVLVKIYAG--KGYGYVQFGTRVSAEDAIQRMQGK 272
Query: 118 HLFGQPIKVNWAYASGQREDTSGHFNIFVG 147
+ Q I+++W + R+ ++ + G
Sbjct: 273 VIGQQVIQISWGSSMTARQMDPSQWSAYYG 302
>gi|356538948|ref|XP_003537962.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
isoform 1 [Glycine max]
Length = 401
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 92/294 (31%), Positives = 149/294 (50%), Gaps = 21/294 (7%)
Query: 56 CRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS----YGFIHYFDRRSAAMAI 111
R++++G++ V E L + F+ G V K+IR + YGF+ + SA +
Sbjct: 9 VRTLWIGDLQYWVDESYLSQCFAHNGEVVSIKIIRNKLTGQPEGYGFVEFVSHASAEAFL 68
Query: 112 LSLNGRHLFG--QPIKVNWAYASGQREDTSGHFNIFVGDLSPEVTDATLFACFSV-YPSC 168
+ NG + G Q ++NWA D+ +IFVGDL+P+VTD L F YPS
Sbjct: 69 RTYNGAQMPGTEQTFRLNWA----SFGDSGPDHSIFVGDLAPDVTDFLLQETFRAHYPSV 124
Query: 169 SDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDK 228
A+V+ D TGRS+G+GFV F ++ A+ ++ G + +R +R + AT +
Sbjct: 125 KGAKVVTDPATGRSKGYGFVKFADEAQRNRAMTEMNGVYCSTRPMRISAATPKKNASFQH 184
Query: 229 QSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGA 288
Q + K++ + S+ + APEN+ TTV +GNL VT+ +L + F G
Sbjct: 185 QYAPPKAMYQFPAYSAP-----VSAVAPENDVNNTTVCIGNLDLNVTEEELKQTFMQFGD 239
Query: 289 GVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSKPT 342
V+ V++ KG+G+V++ T A AIQ Q + + ++ SWGS T
Sbjct: 240 IVL--VKIYAGKGYGYVQFGTRVSAEDAIQ---RMQGKVIGQQVIQISWGSSMT 288
Score = 43.1 bits (100), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 44/87 (50%), Gaps = 2/87 (2%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSSYGFIHYFDRRSAAMAILSLNGR 117
+V +GN+ VTE L++ F G + K+ YG++ + R SA AI + G+
Sbjct: 215 TVCIGNLDLNVTEEELKQTFMQFGDIVLVKIYAG--KGYGYVQFGTRVSAEDAIQRMQGK 272
Query: 118 HLFGQPIKVNWAYASGQREDTSGHFNI 144
+ Q I+++W + R+D G + +
Sbjct: 273 VIGQQVIQISWGSSMTARQDVPGGWGV 299
>gi|359492062|ref|XP_002284337.2| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
isoform 1 [Vitis vinifera]
Length = 409
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 93/296 (31%), Positives = 150/296 (50%), Gaps = 38/296 (12%)
Query: 57 RSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS----YGFIHYFDRRSAAMAIL 112
R+++VG++H + E L F++TG + K+IR ++ YGF+ +F +A +
Sbjct: 84 RTIWVGDLHNWMDENYLHSCFAATGELASMKVIRNKQTGSSEGYGFVEFFSHAAAEKVLQ 143
Query: 113 SLNGRHL--FGQPIKVNWAYAS--GQREDTSGHFNIFVGDLSPEVTDATLFACFS-VYPS 167
G + QP ++NWA S +R D +IFVGDL+ +V+D+ L F+ YPS
Sbjct: 144 GYAGVLMPNTDQPFRLNWATFSMGDKRSDNGPDLSIFVGDLASDVSDSLLHETFAGKYPS 203
Query: 168 CSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT-KGAGNNE 226
A+V++D TGRS+G+GFV F ++ + A+ ++ G + SR +R AT + + +
Sbjct: 204 VKAAKVVFDANTGRSKGYGFVRFGDENERSQAMTEMNGVYCSSRPMRIGAATPRKSSGYQ 263
Query: 227 DKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSL 286
+ SS +S DG TT++VG L P V+ DL + F
Sbjct: 264 QQYSSHVQS----------DGDSMN-----------TTIFVGGLDPNVSDEDLRQPFSQY 302
Query: 287 GAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQ-MKCSWGSKP 341
G I V++ KG GFV+++ A A+Q N T + GKQ ++ SWG P
Sbjct: 303 GE--IVSVKIPVGKGCGFVQFANRNNAEDALQKLNGT----VIGKQTVRLSWGRNP 352
>gi|326513006|dbj|BAK03410.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326525779|dbj|BAJ88936.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 436
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 85/294 (28%), Positives = 154/294 (52%), Gaps = 27/294 (9%)
Query: 56 CRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS----YGFIHYFDRRSAAMAI 111
R++++G++ + E + F++TG + KLIR ++ YGF+ + +A +
Sbjct: 90 VRTLWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVL 149
Query: 112 LSLNGRHLFGQPI--KVNWAYASGQREDTSGHFNIFVGDLSPEVTDATLFACFSV-YPSC 168
+ NG+ + + ++NWA A +R+DT + IFVGDL+ +VTD L F V YPS
Sbjct: 150 QTFNGQMMPNVELAYRLNWASAGEKRDDTP-DYTIFVGDLAADVTDYMLQETFRVHYPSV 208
Query: 169 SDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDK 228
A+V+ D+ T RS+G+GFV F + + A+ ++ G SR +R G ++
Sbjct: 209 KGAKVVTDKMTMRSKGYGFVKFGDPTEQARAMTEMNGMPCSSRPMRI-------GPAANR 261
Query: 229 QSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGA 288
+++ + V + N +++ + +N+P TT++VG L P VT+ L + F G
Sbjct: 262 KTTGVQERVPIPNTNTQGAQS-------DNDPNNTTIFVGGLDPNVTEDALKQVFAPYGE 314
Query: 289 GVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSKPT 342
+ V++ K GFV+Y+ A A+Q+ Q + + G+ ++ SWG P+
Sbjct: 315 --VVHVKIPVGKRCGFVQYANRPSAEQALQL---LQGTLVGGQNVRLSWGRSPS 363
>gi|449488119|ref|XP_004157944.1| PREDICTED: uncharacterized protein LOC101229139 [Cucumis sativus]
Length = 86
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 70/93 (75%), Positives = 76/93 (81%), Gaps = 11/93 (11%)
Query: 1 MQHQRLKQQQQQQQQALMQQALLQQQSLYHPGLLAAPQIEPIPSGNLPPGFDPSTCRSVY 60
MQ+QRL+QQ A+MQQ+L HPGLLAAPQIEPI SGNLPPGFD STCRSVY
Sbjct: 1 MQYQRLRQQ------AMMQQSLYP-----HPGLLAAPQIEPILSGNLPPGFDSSTCRSVY 49
Query: 61 VGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDK 93
VGNIH QVTEPLLQEVFSS GP+EGCKLIRK+K
Sbjct: 50 VGNIHPQVTEPLLQEVFSSIGPIEGCKLIRKEK 82
>gi|224115306|ref|XP_002316998.1| predicted protein [Populus trichocarpa]
gi|222860063|gb|EEE97610.1| predicted protein [Populus trichocarpa]
Length = 403
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 89/296 (30%), Positives = 149/296 (50%), Gaps = 29/296 (9%)
Query: 56 CRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSSY----GFIHYFDRRSAAMAI 111
+S+++G++ + E L +FS+TG + K+IR ++ Y GFI + R +A +
Sbjct: 68 IKSLWIGDLQQWMDENYLLSIFSATGEIVQAKVIRNKQTGYPEGYGFIEFVSRAAAERIL 127
Query: 112 LSLNGRHLFG--QPIKVNWAY--ASGQREDTSGHFNIFVGDLSPEVTDATLFACF-SVYP 166
+ NG + Q ++NWA A +R+D F +FVGDL+ +V D L F +VYP
Sbjct: 128 QTYNGTPMPNSEQAFRLNWATLGAGERRQDDGPDFTVFVGDLAADVNDYLLQETFRNVYP 187
Query: 167 SCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNE 226
S A+V+ D+ TGRS+G+GF+ F ++ + + A+ ++ G++ +R +R
Sbjct: 188 SVKGAKVVTDRVTGRSKGYGFIRFADENEQRRAMVEMNGQYCSTRPMRI----------- 236
Query: 227 DKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSL 286
A + LT + + EN+P TT++VG L P VT L F
Sbjct: 237 ----GPAATKKPLTQQYQKATYQNPQGNQGENDPNNTTIFVGALDPSVTDDTLRAVFSKY 292
Query: 287 GAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSKPT 342
G V V++ K GFV+++ A A+ M N TQ + G+ ++ SWG P+
Sbjct: 293 GELV--HVKIPAGKRCGFVQFANRTSAEQALSMLNGTQ---IAGQNIRLSWGRSPS 343
Score = 46.2 bits (108), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 43/77 (55%), Gaps = 3/77 (3%)
Query: 52 DPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSSYGFIHYFDRRSAAMAI 111
DP+ +++VG + VT+ L+ VFS G + K+ + GF+ + +R SA A+
Sbjct: 265 DPNNT-TIFVGALDPSVTDDTLRAVFSKYGELVHVKIPAGKRC--GFVQFANRTSAEQAL 321
Query: 112 LSLNGRHLFGQPIKVNW 128
LNG + GQ I+++W
Sbjct: 322 SMLNGTQIAGQNIRLSW 338
>gi|268578407|ref|XP_002644186.1| Hypothetical protein CBG17168 [Caenorhabditis briggsae]
Length = 244
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 76/201 (37%), Positives = 116/201 (57%), Gaps = 26/201 (12%)
Query: 139 SGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQS 198
S HF++FVGDLS +V++ L + F + S+A+V+ D +T +S+G+GFVSF N+Q+A++
Sbjct: 2 SEHFHVFVGDLSKDVSNELLKSTFQKFGEVSEAKVIRDAQTQKSKGYGFVSFPNKQNAEN 61
Query: 199 AINDLTGKWLGSRQIRCNWAT-KGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPE 257
AI+ + GKW+G R +R NWA K + N DK + + ++ N + D
Sbjct: 62 AISGMNGKWIGKRAVRTNWAARKNSEENRDKLTFE-----QVFNSTKADN---------- 106
Query: 258 NNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAI 317
T+VYVGN++P+ T +DL F + G I EVRV + + + FVRY A AI
Sbjct: 107 -----TSVYVGNISPQTTDVDLRDSFSTYGD--IAEVRVFKTQRYAFVRYEKKECATKAI 159
Query: 318 QMGNTTQSSYLFGKQMKCSWG 338
N + L G Q++CSWG
Sbjct: 160 MEMNGKE---LAGNQVRCSWG 177
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 90/176 (51%), Gaps = 23/176 (13%)
Query: 59 VYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS----YGFIHYFDRRSAAMAILSL 114
V+VG++ V+ LL+ F G V K+IR ++ YGF+ + ++++A AI +
Sbjct: 7 VFVGDLSKDVSNELLKSTFQKFGEVSEAKVIRDAQTQKSKGYGFVSFPNKQNAENAISGM 66
Query: 115 NGRHLFGQPIKVNWAYASGQRED-------------TSGHFNIFVGDLSPEVTDATLFAC 161
NG+ + + ++ NWA E+ + + +++VG++SP+ TD L
Sbjct: 67 NGKWIGKRAVRTNWAARKNSEENRDKLTFEQVFNSTKADNTSVYVGNISPQTTDVDLRDS 126
Query: 162 FSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNW 217
FS Y ++ RV KT R + FV + ++ A AI ++ GK L Q+RC+W
Sbjct: 127 FSTYGDIAEVRVF---KTQR---YAFVRYEKKECATKAIMEMNGKELAGNQVRCSW 176
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 48/94 (51%), Gaps = 4/94 (4%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSSYGFIHYFDRRSAAMAILSLNGR 117
SVYVGNI Q T+ L++ FS+ G + ++ + + Y F+ Y + A AI+ +NG+
Sbjct: 108 SVYVGNISPQTTDVDLRDSFSTYGDIAEVRVFKTQR--YAFVRYEKKECATKAIMEMNGK 165
Query: 118 HLFGQPIKVNWAYASGQREDTSGHFNIFVGDLSP 151
L G ++ +W E H +F DL P
Sbjct: 166 ELAGNQVRCSWGRTQAVIE-IENHIIVF-SDLQP 197
>gi|328715702|ref|XP_003245699.1| PREDICTED: nucleolysin TIA-1 isoform p40-like isoform 2
[Acyrthosiphon pisum]
gi|328715706|ref|XP_003245700.1| PREDICTED: nucleolysin TIA-1 isoform p40-like isoform 3
[Acyrthosiphon pisum]
Length = 420
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 80/213 (37%), Positives = 115/213 (53%), Gaps = 20/213 (9%)
Query: 137 DTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDA 196
+ S H +IFVGDLSPE+ TL F+ + SD RV+ D +T +S+G+GFVSF + +A
Sbjct: 57 NKSEHHHIFVGDLSPEIETQTLREAFAPFGEISDCRVVRDPQTLKSKGYGFVSFLKKAEA 116
Query: 197 QSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAP 256
+SAI + G+WLGSR IR NWAT+ + ++ + E+ N SS
Sbjct: 117 ESAIAAMNGQWLGSRSIRTNWATRKPPTLKTDSNTKPLTFDEVYNQSS------------ 164
Query: 257 ENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALA 316
P TVY G L +T + + F G I+E+RV +DKG+ FVR++T A A
Sbjct: 165 ---PTNCTVYCGGLTSGLTDELVQKTFAPFGN--IQEIRVFKDKGYAFVRFATKESATHA 219
Query: 317 IQMGNTTQSSYLFGKQMKCSWGSKPTPPGTSSN 349
I +S + G+ +KCSWG + P S N
Sbjct: 220 I---VAVHNSDINGQPVKCSWGKESGEPIVSQN 249
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/180 (21%), Positives = 83/180 (46%), Gaps = 27/180 (15%)
Query: 59 VYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKS----SYGFIHYFDRRSAAMAILSL 114
++VG++ ++ L+E F+ G + C+++R ++ YGF+ + + A AI ++
Sbjct: 64 IFVGDLSPEIETQTLREAFAPFGEISDCRVVRDPQTLKSKGYGFVSFLKKAEAESAIAAM 123
Query: 115 NGRHLFGQPIKVNWA-----------------YASGQREDTSGHFNIFVGDLSPEVTDAT 157
NG+ L + I+ NWA + + + + ++ G L+ +TD
Sbjct: 124 NGQWLGSRSIRTNWATRKPPTLKTDSNTKPLTFDEVYNQSSPTNCTVYCGGLTSGLTDEL 183
Query: 158 LFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNW 217
+ F+ + + + RV D +G+ FV F ++ A AI + + + ++C+W
Sbjct: 184 VQKTFAPFGNIQEIRVFKD------KGYAFVRFATKESATHAIVAVHNSDINGQPVKCSW 237
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 50/83 (60%), Gaps = 3/83 (3%)
Query: 52 DPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSSYGFIHYFDRRSAAMAI 111
P+ C +VY G + + +T+ L+Q+ F+ G ++ ++ KDK Y F+ + + SA AI
Sbjct: 164 SPTNC-TVYCGGLTSGLTDELVQKTFAPFGNIQEIRVF-KDKG-YAFVRFATKESATHAI 220
Query: 112 LSLNGRHLFGQPIKVNWAYASGQ 134
++++ + GQP+K +W SG+
Sbjct: 221 VAVHNSDINGQPVKCSWGKESGE 243
Score = 46.2 bits (108), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 49/102 (48%), Gaps = 12/102 (11%)
Query: 258 NNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRD------KGFGFVRYSTHA 311
N ++ ++VG+L+PE+ L F G I + RV RD KG+GFV + A
Sbjct: 57 NKSEHHHIFVGDLSPEIETQTLREAFAPFGE--ISDCRVVRDPQTLKSKGYGFVSFLKKA 114
Query: 312 EAALAIQMGNTTQSSYLFGKQMKCSWGS-KPTPPGTSSNPLP 352
EA AI N +L + ++ +W + KP T SN P
Sbjct: 115 EAESAIAAMN---GQWLGSRSIRTNWATRKPPTLKTDSNTKP 153
>gi|255554923|ref|XP_002518499.1| nuclear acid binding protein, putative [Ricinus communis]
gi|223542344|gb|EEF43886.1| nuclear acid binding protein, putative [Ricinus communis]
Length = 430
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 94/309 (30%), Positives = 157/309 (50%), Gaps = 32/309 (10%)
Query: 56 CRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS----YGFIHYFDRRSAAMAI 111
R++++G++ + E + F+ TG V K+IR ++ YGFI + +A +
Sbjct: 88 VRTLWIGDLQYWMDENYINSCFAHTGEVTSVKVIRNKQTGQVEGYGFIEFGSHGTAERIL 147
Query: 112 LSLNGRHLFG--QPIKVNWA-YASGQREDTSGHFNIFVGDLSPEVTDATLFACFSV-YPS 167
+ NG + Q ++NWA ++ G + D + F IFVGDL+ +VTD L F V YPS
Sbjct: 148 QTYNGTPMPNGEQNFRLNWASFSGGDKRDDTPDFTIFVGDLAADVTDYILQDTFRVHYPS 207
Query: 168 CSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNED 227
A+V+ D+ TGR++G+GFV F ++ + A+ D+ G + +R +R AT +
Sbjct: 208 VKGAKVVIDRLTGRTKGYGFVRFGDESEQVRAMTDMNGAFCSTRPMRIGLAT-------N 260
Query: 228 KQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLG 287
K + + + + +S+ E EN+P TT++VGNL VT +L F G
Sbjct: 261 KNAVTGQQYPKASYQNSQTQGEN------ENDPNNTTIFVGNLDSNVTDDNLRELFGRYG 314
Query: 288 AGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSKPTPPGTS 347
+ V++ K GFV+++ + A A+++ N T L G+ ++ SWG P
Sbjct: 315 Q--LLHVKIPAGKRCGFVQFADRSCAEEALRLLNGTS---LSGQSIRLSWGRSP------ 363
Query: 348 SNPLPPPAA 356
SN P P A
Sbjct: 364 SNKQPQPDA 372
>gi|255718453|ref|XP_002555507.1| KLTH0G10912p [Lachancea thermotolerans]
gi|238936891|emb|CAR25070.1| KLTH0G10912p [Lachancea thermotolerans CBS 6340]
Length = 436
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 70/172 (40%), Positives = 101/172 (58%), Gaps = 8/172 (4%)
Query: 54 STCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLI---RKDKSSYGFIHYFDRRSAAMA 110
++ R +YVGN+ VTE +L++ F G + K++ +++Y F+ + A +A
Sbjct: 64 TSDRILYVGNLDLAVTEEMLKQYFQVGGSIANVKILMDKNNKQANYAFVEFHQPHDANVA 123
Query: 111 ILSLNGRHLFGQPIKVNWAYASGQ--REDTSGHFNIFVGDLSPEVTDATLFACFSVYPSC 168
+L+G+ + IK+NWA+ S Q EDT FN+FVGDL+ +V D TL F P+
Sbjct: 124 FQTLDGKQIENHVIKINWAFQSQQVSSEDT---FNLFVGDLNVDVDDETLARTFKDIPTF 180
Query: 169 SDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATK 220
A VMWD +TGRSRG+GFVSF Q AQ A+ D G + R IR NWA+K
Sbjct: 181 IQAHVMWDMQTGRSRGYGFVSFGEQTQAQKAMEDNQGAVVNGRAIRINWASK 232
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 95/219 (43%), Gaps = 42/219 (19%)
Query: 126 VNWAYASGQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGF 185
V A AS +TS ++VG+L VT+ L F V S ++ +++ D K + +
Sbjct: 52 VTPANASRGGRETSDRI-LYVGNLDLAVTEEMLKQYFQVGGSIANVKILMD-KNNKQANY 109
Query: 186 GFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSE 245
FV F DA A L GK + + I+ NWA QS SSE
Sbjct: 110 AFVEFHQPHDANVAFQTLDGKQIENHVIKINWAF---------QSQQV---------SSE 151
Query: 246 DGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLG----AGVIEEVRVQRDKG 301
D T N ++VG+L +V L R F + A V+ +++ R +G
Sbjct: 152 D---TFN------------LFVGDLNVDVDDETLARTFKDIPTFIQAHVMWDMQTGRSRG 196
Query: 302 FGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSK 340
+GFV + +A A++ Q + + G+ ++ +W SK
Sbjct: 197 YGFVSFGEQTQAQKAME---DNQGAVVNGRAIRINWASK 232
Score = 45.8 bits (107), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 44/82 (53%), Gaps = 7/82 (8%)
Query: 260 PQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQM 319
P+ TTVY+GN+ T+ DL + G I + + D+G F++Y TH +AA+ I
Sbjct: 318 PRVTTVYIGNIPHFATEQDLIPLLQNFG--FIVDFKHYPDRGCCFIKYGTHEQAAVCI-- 373
Query: 320 GNTTQSSYLF-GKQMKCSWGSK 340
T ++ F G+ ++ WG +
Sbjct: 374 --LTLGNFPFQGRNLRTGWGKE 393
>gi|357625522|gb|EHJ75940.1| hypothetical protein KGM_20346 [Danaus plexippus]
Length = 245
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 76/207 (36%), Positives = 114/207 (55%), Gaps = 20/207 (9%)
Query: 141 HFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAI 200
H++IFVGDLSPE+ L F+ + SD RV+ D +T +S+G+GFVSF + +A+SAI
Sbjct: 53 HYHIFVGDLSPEIETQNLRDAFAPFGEISDCRVVRDPQTLKSKGYGFVSFLKKSEAESAI 112
Query: 201 NDLTGKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNP 260
+ G+WLGSR IR NWAT+ +++ +S + E+ N SS P
Sbjct: 113 TAMNGQWLGSRSIRTNWATRKPPAPKNELNSKPLTFDEVYNQSS---------------P 157
Query: 261 QYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMG 320
TVY G L +T+ + + F G I+E+RV +DKG+ F+R+ST A AI
Sbjct: 158 TNCTVYCGGLTAGLTEELMQKTFQPF--GTIQEIRVFKDKGYAFIRFSTKESATHAIV-- 213
Query: 321 NTTQSSYLFGKQMKCSWGSKPTPPGTS 347
++ + G +KCSWG + P +
Sbjct: 214 -AVHNADVNGAPVKCSWGKESGDPNNA 239
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/188 (19%), Positives = 83/188 (44%), Gaps = 27/188 (14%)
Query: 59 VYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKS----SYGFIHYFDRRSAAMAILSL 114
++VG++ ++ L++ F+ G + C+++R ++ YGF+ + + A AI ++
Sbjct: 56 IFVGDLSPEIETQNLRDAFAPFGEISDCRVVRDPQTLKSKGYGFVSFLKKSEAESAITAM 115
Query: 115 NGRHLFGQPIKVNWA-----------------YASGQREDTSGHFNIFVGDLSPEVTDAT 157
NG+ L + I+ NWA + + + + ++ G L+ +T+
Sbjct: 116 NGQWLGSRSIRTNWATRKPPAPKNELNSKPLTFDEVYNQSSPTNCTVYCGGLTAGLTEEL 175
Query: 158 LFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNW 217
+ F + + + RV D +G+ F+ F ++ A AI + + ++C+W
Sbjct: 176 MQKTFQPFGTIQEIRVFKD------KGYAFIRFSTKESATHAIVAVHNADVNGAPVKCSW 229
Query: 218 ATKGAGNN 225
+ N
Sbjct: 230 GKESGDPN 237
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 48/88 (54%), Gaps = 3/88 (3%)
Query: 53 PSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSSYGFIHYFDRRSAAMAIL 112
P+ C +VY G + +TE L+Q+ F G ++ ++ KDK Y FI + + SA AI+
Sbjct: 157 PTNC-TVYCGGLTAGLTEELMQKTFQPFGTIQEIRVF-KDKG-YAFIRFSTKESATHAIV 213
Query: 113 SLNGRHLFGQPIKVNWAYASGQREDTSG 140
+++ + G P+K +W SG + G
Sbjct: 214 AVHNADVNGAPVKCSWGKESGDPNNAQG 241
Score = 45.4 bits (106), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 49/102 (48%), Gaps = 12/102 (11%)
Query: 258 NNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRD------KGFGFVRYSTHA 311
N ++ ++VG+L+PE+ +L F G I + RV RD KG+GFV + +
Sbjct: 49 NKLEHYHIFVGDLSPEIETQNLRDAFAPFGE--ISDCRVVRDPQTLKSKGYGFVSFLKKS 106
Query: 312 EAALAIQMGNTTQSSYLFGKQMKCSWGS-KPTPPGTSSNPLP 352
EA AI N +L + ++ +W + KP P N P
Sbjct: 107 EAESAITAMN---GQWLGSRSIRTNWATRKPPAPKNELNSKP 145
>gi|449454730|ref|XP_004145107.1| PREDICTED: polyadenylate-binding protein RBP45-like [Cucumis
sativus]
gi|449472157|ref|XP_004153511.1| PREDICTED: polyadenylate-binding protein RBP45-like [Cucumis
sativus]
Length = 408
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 94/307 (30%), Positives = 155/307 (50%), Gaps = 26/307 (8%)
Query: 43 PSGNLPPGFDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS----YGF 98
P G P + R++++G++ + E + F+ TG V K+IR ++ YGF
Sbjct: 52 PQGQPPQPANGDEVRTLWIGDLQYWMDENYIFNCFAHTGEVSSVKVIRNKQTGQSEGYGF 111
Query: 99 IHYFDRRSAAMAILSLNGRHL--FGQPIKVNWAYASGQREDTSGHFNIFVGDLSPEVTDA 156
I + R +A + + NG + Q ++NWA A +R+D S + IFVGDL+ +VTD
Sbjct: 112 IEFLTRPAAERVLQTYNGTAMPNGAQNFRLNWASAGEKRQDDSPDYTIFVGDLAGDVTDY 171
Query: 157 TLFACFSV-YPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRC 215
L F Y S A+V+ D+ TGR++G+GFV F ++ + A+ ++ G SR +R
Sbjct: 172 VLQETFRARYNSVKGAKVVIDRLTGRTKGYGFVKFGDESEQIRAMTEMNGVHCSSRPMRI 231
Query: 216 NWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVT 275
G N++ S + + S ++ T N EN+P TT++VGNL VT
Sbjct: 232 -----GPAANKNTSGSQ-----QFSKTSYQNPPGTQN----ENDPNNTTIFVGNLDSNVT 277
Query: 276 QLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKC 335
L + F G V V++ K GFV++S + A A+++ N T + G+ ++
Sbjct: 278 DEHLRQVFSQYGELV--HVKIPAGKRCGFVQFSDRSCAEEALRILNGTP---IGGQNIRL 332
Query: 336 SWGSKPT 342
SWG P+
Sbjct: 333 SWGRSPS 339
>gi|2982251|gb|AAC32113.1| putative RNA-binding protein [Picea mariana]
Length = 169
Score = 135 bits (339), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 81/150 (54%), Positives = 96/150 (64%), Gaps = 19/150 (12%)
Query: 278 DLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSW 337
+LHR F +LG GVIE+VRVQRDKGFGFVRY +H EAALAIQ+ N + GK +KCSW
Sbjct: 1 ELHRQFLALGVGVIEDVRVQRDKGFGFVRYRSHEEAALAIQLAN---GRVICGKSIKCSW 57
Query: 338 GSKPTPPGTSSNPLPPPAA------AP---IPGLSAADLLAYERQIAMSKMGGVHALMHP 388
GSKPTPPG SSN LPPP+A AP G +AAD+LAY RQ+ MS+ G L+
Sbjct: 58 GSKPTPPGASSNALPPPSAPFQGVVAPQGLNQGYTAADILAY-RQLNMSQAGAGQPLLPL 116
Query: 389 QAQH----PLKQAAMGVGSAGASQAIYDGF 414
AQ L MGV G +Q +YD F
Sbjct: 117 SAQQGMGLGLGHGPMGV--VGPNQNVYDNF 144
Score = 45.1 bits (105), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 30/48 (62%)
Query: 173 VMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATK 220
V+ D + R +GFGFV +R+ ++A AI G+ + + I+C+W +K
Sbjct: 13 VIEDVRVQRDKGFGFVRYRSHEEAALAIQLANGRVICGKSIKCSWGSK 60
>gi|194707750|gb|ACF87959.1| unknown [Zea mays]
gi|414885794|tpg|DAA61808.1| TPA: hypothetical protein ZEAMMB73_995180 [Zea mays]
Length = 433
Score = 135 bits (339), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 105/341 (30%), Positives = 158/341 (46%), Gaps = 58/341 (17%)
Query: 57 RSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS----YGFIHYFDRRSAAMAIL 112
+SV+VG++H + E L F TG V K+IR ++ YGF+ ++ +A +
Sbjct: 103 KSVWVGDLHYWMDENYLHSCFGYTGEVVAIKVIRNKQTGQSEGYGFVEFYSHAAAEKVLE 162
Query: 113 SLNGRHLF---GQPIKVNWAYAS--GQREDTSGHFNIFVGDLSPEVTDATLFACFSV-YP 166
+G H+ QP ++NWA S +R D++ +IFVGDL+ +V DATL FS Y
Sbjct: 163 GFSG-HIMPNTDQPFRLNWASFSMGDRRSDSASDHSIFVGDLASDVNDATLLEAFSSRYS 221
Query: 167 SCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNE 226
S A+V+ D TGRS+G+GFV F + + A+ ++ G + SR +R AT +
Sbjct: 222 SVKGAKVVIDANTGRSKGYGFVRFGDDSEKTQAMTEMNGVYCSSRPMRIGPATPRKSSGT 281
Query: 227 DKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSL 286
+ A + DG + TN TTV+VG L P V++ DL + F
Sbjct: 282 SGSNGSA---------ARSDGGDLTN----------TTVFVGGLDPNVSEEDLRQTFSQY 322
Query: 287 GAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQ-MKCSWGSKP---- 341
G I V++ K GFV+++ A A+Q N + GKQ ++ SWG P
Sbjct: 323 GE--ISSVKIPIGKQCGFVQFAQRKNAEDALQGLNGS----TIGKQNVRLSWGRNPANKQ 376
Query: 342 -----------------TPPGTSSNPLPPPAAAPIPGLSAA 365
PP + P A P PG+ AA
Sbjct: 377 FRGDNGNQWNNGGMYYAAPPFYNGYGYPAAAPFPDPGMYAA 417
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 85/185 (45%), Gaps = 24/185 (12%)
Query: 52 DPSTCRSVYVGNIHTQVTEPLLQEVFSST-GPVEGCKLIRKDKS----SYGFIHYFDRRS 106
D ++ S++VG++ + V + L E FSS V+G K++ + YGF+ + D
Sbjct: 191 DSASDHSIFVGDLASDVNDATLLEAFSSRYSSVKGAKVVIDANTGRSKGYGFVRFGDDSE 250
Query: 107 AAMAILSLNGRHLFGQPIKVNWA-----------YASGQREDTSGHFN--IFVGDLSPEV 153
A+ +NG + +P+++ A S R D N +FVG L P V
Sbjct: 251 KTQAMTEMNGVYCSSRPMRIGPATPRKSSGTSGSNGSAARSDGGDLTNTTVFVGGLDPNV 310
Query: 154 TDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQI 213
++ L FS Y S ++ ++ GFV F +++A+ A+ L G +G + +
Sbjct: 311 SEEDLRQTFSQYGEISSVKIPIGKQC------GFVQFAQRKNAEDALQGLNGSTIGKQNV 364
Query: 214 RCNWA 218
R +W
Sbjct: 365 RLSWG 369
>gi|326513618|dbj|BAJ87828.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 388
Score = 135 bits (339), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 90/297 (30%), Positives = 150/297 (50%), Gaps = 30/297 (10%)
Query: 53 PSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS----YGFIHYFDRRSAA 108
P+ R++++G++ + E + F+STG V+ KLIR ++ YGFI + R A
Sbjct: 79 PNEARTLWIGDLQYWMDENYVYNCFASTGEVQSVKLIRDKQTGQLQGYGFIEFTSRAGAE 138
Query: 109 MAILSLNGRHL--FGQPIKVNWAYASGQREDTSGHFNIFVGDLSPEVTDATLFACFSV-Y 165
+ + NG + ++NWA A G++ D + IFVGDL+ +VTD L F Y
Sbjct: 139 RVLQTFNGAMMPNVEMAYRLNWATA-GEKHDDGADYTIFVGDLAADVTDYLLQETFRAQY 197
Query: 166 PSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNN 225
PS A+V+ D+ T RS+G+GFV F + + A+ ++ G SR +R G N
Sbjct: 198 PSVKGAKVVTDKLTMRSKGYGFVKFGDPTEQTRAMTEMNGMICSSRPMRI-----GPAAN 252
Query: 226 EDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHS 285
+ K + + V + G +T +N+P +T++VG L P T+ L + F
Sbjct: 253 KQKANGVQEKV------PTAQGIQT------DNDPSNSTIFVGGLDPSATEDVLKQVFTP 300
Query: 286 LGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSKPT 342
G V V++ K GFV+Y++ + A A+ M Q + + G+ ++ SWG P+
Sbjct: 301 YGEVV--HVKIPVGKRCGFVQYASRSSAEEALLM---LQGTMIEGQNVRLSWGRSPS 352
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 46/85 (54%), Gaps = 3/85 (3%)
Query: 52 DPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSSYGFIHYFDRRSAAMAI 111
DPS +++VG + TE +L++VF+ G V K+ + GF+ Y R SA A+
Sbjct: 274 DPSNS-TIFVGGLDPSATEDVLKQVFTPYGEVVHVKIPVGKRC--GFVQYASRSSAEEAL 330
Query: 112 LSLNGRHLFGQPIKVNWAYASGQRE 136
L L G + GQ ++++W + ++
Sbjct: 331 LMLQGTMIEGQNVRLSWGRSPSNKQ 355
>gi|10120421|gb|AAG13046.1|AC011807_5 Putative RNA binding protein [Arabidopsis thaliana]
Length = 468
Score = 135 bits (339), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 94/311 (30%), Positives = 157/311 (50%), Gaps = 32/311 (10%)
Query: 57 RSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKS----SYGFIHYFDRRSAAMAIL 112
++++VG++ + E L FS T V K+IR ++ YGF+ + R +A A+
Sbjct: 119 KTLWVGDLLHWMDETYLHTCFSHTNEVSSVKVIRNKQTCQSEGYGFVEFLSRSAAEEALQ 178
Query: 113 SLNGRHL--FGQPIKVNWA-YASGQREDTSG--HFNIFVGDLSPEVTDATLFACFS-VYP 166
S +G + QP ++NWA +++G++ + +IFVGDL+P+V+DA L F+ YP
Sbjct: 179 SFSGVTMPNAEQPFRLNWASFSTGEKRASENGPDLSIFVGDLAPDVSDAVLLETFAGRYP 238
Query: 167 SCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT--KGAGN 224
S A+V+ D TGRS+G+GFV F ++ + A+ ++ G + SRQ+R AT + A
Sbjct: 239 SVKGAKVVIDSNTGRSKGYGFVRFGDENERSRAMTEMNGAFCSSRQMRVGIATPKRAAAY 298
Query: 225 NEDKQSSDAKSVVELTNGSSE-------------DGKETTNTEAPENNPQYTTVYVGNLA 271
+ S + ++ N +SE G N + +T++VG L
Sbjct: 299 GQQNGSQGLITCLDALNIASEVNCNVFIGLALTLAGGHGGNGSMSDGESNNSTIFVGGLD 358
Query: 272 PEVTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGK 331
+VT+ DL + F G + V++ KG GFV+++ A AI N T + GK
Sbjct: 359 ADVTEEDLMQPFSDFGE--VVSVKIPVGKGCGFVQFANRQSAEEAIGNLNGT----VIGK 412
Query: 332 Q-MKCSWGSKP 341
++ SWG P
Sbjct: 413 NTVRLSWGRSP 423
>gi|226492692|ref|NP_001144988.1| uncharacterized protein LOC100278143 [Zea mays]
gi|195649537|gb|ACG44236.1| hypothetical protein [Zea mays]
Length = 436
Score = 135 bits (339), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 96/296 (32%), Positives = 146/296 (49%), Gaps = 37/296 (12%)
Query: 57 RSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS----YGFIHYFDRRSAAMAIL 112
+SV+VG++H + E L F TG V K+IR ++ YGF+ ++ +A +
Sbjct: 106 KSVWVGDLHYWMDENYLHSCFGYTGEVVAIKVIRNKQTGQSEGYGFVEFYSHAAAEKVLE 165
Query: 113 SLNGRHLF---GQPIKVNWAYAS--GQREDTSGHFNIFVGDLSPEVTDATLFACFSV-YP 166
+G H+ QP ++NWA S +R D + +IFVGDL+ +V DATL FS Y
Sbjct: 166 GFSG-HIMPNTDQPFRLNWASFSMGDRRSDAASDHSIFVGDLASDVNDATLLEAFSSRYS 224
Query: 167 SCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNE 226
S A+V+ D TGRS+G+GFV F + + A+ ++ G + SR +R AT +
Sbjct: 225 SVKGAKVVIDANTGRSKGYGFVRFGDDSEKTQAMTEMNGVYCSSRPMRIGPATPRKSSGT 284
Query: 227 DKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSL 286
+ A + DG + TN TTV+VG L P V++ DL + F
Sbjct: 285 SGSNGSA---------ARSDGGDLTN----------TTVFVGGLDPNVSEEDLRQTFSQY 325
Query: 287 GAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQ-MKCSWGSKP 341
G I V++ K GFV+++ A A+Q N + GKQ ++ SWG P
Sbjct: 326 GE--ISSVKIPIGKQCGFVQFAQRKNAEDALQGLNGS----TIGKQNVRLSWGRNP 375
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 85/184 (46%), Gaps = 24/184 (13%)
Query: 52 DPSTCRSVYVGNIHTQVTEPLLQEVFSST-GPVEGCKLIRKDKS----SYGFIHYFDRRS 106
D ++ S++VG++ + V + L E FSS V+G K++ + YGF+ + D
Sbjct: 194 DAASDHSIFVGDLASDVNDATLLEAFSSRYSSVKGAKVVIDANTGRSKGYGFVRFGDDSE 253
Query: 107 AAMAILSLNGRHLFGQPIKVNWA-----------YASGQREDTSGHFN--IFVGDLSPEV 153
A+ +NG + +P+++ A S R D N +FVG L P V
Sbjct: 254 KTQAMTEMNGVYCSSRPMRIGPATPRKSSGTSGSNGSAARSDGGDLTNTTVFVGGLDPNV 313
Query: 154 TDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQI 213
++ L FS Y S ++ ++ GFV F +++A+ A+ L G +G + +
Sbjct: 314 SEEDLRQTFSQYGEISSVKIPIGKQC------GFVQFAQRKNAEDALQGLNGSTIGKQNV 367
Query: 214 RCNW 217
R +W
Sbjct: 368 RLSW 371
>gi|326495314|dbj|BAJ85753.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 385
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 90/297 (30%), Positives = 150/297 (50%), Gaps = 30/297 (10%)
Query: 53 PSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS----YGFIHYFDRRSAA 108
P+ R++++G++ + E + F+STG V+ KLIR ++ YGFI + R A
Sbjct: 79 PNEARTLWIGDLQYWMDENYVYNCFASTGEVQSVKLIRDKQTGQLQGYGFIEFTSRAGAE 138
Query: 109 MAILSLNGRHL--FGQPIKVNWAYASGQREDTSGHFNIFVGDLSPEVTDATLFACFSV-Y 165
+ + NG + ++NWA A G++ D + IFVGDL+ +VTD L F Y
Sbjct: 139 RVLQTFNGAMMPNVEMTYRLNWATA-GEKHDDGADYTIFVGDLAADVTDYLLQETFRAQY 197
Query: 166 PSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNN 225
PS A+V+ D+ T RS+G+GFV F + + A+ ++ G SR +R G N
Sbjct: 198 PSVKGAKVVTDKLTMRSKGYGFVKFGDPTEQTRAMTEMNGMICSSRPMRI-----GPAAN 252
Query: 226 EDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHS 285
+ K + + V + G +T +N+P +T++VG L P T+ L + F
Sbjct: 253 KQKANGVQEKV------PTAQGIQT------DNDPSNSTIFVGGLDPSATEDVLKQVFTP 300
Query: 286 LGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSKPT 342
G V V++ K GFV+Y++ + A A+ M Q + + G+ ++ SWG P+
Sbjct: 301 YGEVV--HVKIPVGKRCGFVQYASRSSAEEALLM---LQGTMIEGQNVRLSWGRSPS 352
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 46/85 (54%), Gaps = 3/85 (3%)
Query: 52 DPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSSYGFIHYFDRRSAAMAI 111
DPS +++VG + TE +L++VF+ G V K+ + GF+ Y R SA A+
Sbjct: 274 DPSNS-TIFVGGLDPSATEDVLKQVFTPYGEVVHVKIPVGKRC--GFVQYASRSSAEEAL 330
Query: 112 LSLNGRHLFGQPIKVNWAYASGQRE 136
L L G + GQ ++++W + ++
Sbjct: 331 LMLQGTMIEGQNVRLSWGRSPSNKQ 355
>gi|297799290|ref|XP_002867529.1| hypothetical protein ARALYDRAFT_913848 [Arabidopsis lyrata subsp.
lyrata]
gi|297313365|gb|EFH43788.1| hypothetical protein ARALYDRAFT_913848 [Arabidopsis lyrata subsp.
lyrata]
Length = 418
Score = 134 bits (338), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 93/296 (31%), Positives = 148/296 (50%), Gaps = 31/296 (10%)
Query: 56 CRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSSY----GFIHYFDRRSAAMAI 111
RS+++G++ + E L +FS TG K+IR +S Y GFI + + +A +
Sbjct: 80 IRSLWIGDLQPWMEENYLMNIFSLTGDATSAKVIRNKQSGYSEGYGFIEFVNHATAERIL 139
Query: 112 LSLNGRHL--FGQPIKVNWA-YASGQREDTSG-HFNIFVGDLSPEVTDATLFACF-SVYP 166
+ NG + Q ++NWA +G+R G +FVGDL+P+VTD L F +VY
Sbjct: 140 QAYNGTTMPSSDQAFRLNWAQLGAGERRQAEGPEHTVFVGDLAPDVTDHMLTETFKAVYS 199
Query: 167 SCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNE 226
S A+V+ D+ TGRS+G+GFV F ++ + A+ ++ G++ SR +R G N+
Sbjct: 200 SVKGAKVVTDRTTGRSKGYGFVRFGDESEQIRAMTEMNGQYCSSRPMRT-----GPAANK 254
Query: 227 DKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSL 286
+ S + T E++P TT++VG L V + DL F
Sbjct: 255 KPLTMQPASY------------QNTQGNQGESDPTNTTIFVGALDQSVIEDDLKSVFGQF 302
Query: 287 GAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSKPT 342
G V V++ K GFV+Y+ A A A+ + N TQ L G+ ++ SWG P+
Sbjct: 303 GELV--HVKIPAGKRCGFVQYANRACAEQALSLLNGTQ---LGGQSIRLSWGRSPS 353
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 40/77 (51%), Gaps = 3/77 (3%)
Query: 52 DPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSSYGFIHYFDRRSAAMAI 111
DP T +++VG + V E L+ VF G + K+ + GF+ Y +R A A+
Sbjct: 275 DP-TNTTIFVGALDQSVIEDDLKSVFGQFGELVHVKIPAGKRC--GFVQYANRACAEQAL 331
Query: 112 LSLNGRHLFGQPIKVNW 128
LNG L GQ I+++W
Sbjct: 332 SLLNGTQLGGQSIRLSW 348
>gi|242021295|ref|XP_002431080.1| Heterogeneous nuclear ribonucleoprotein A1, putative [Pediculus
humanus corporis]
gi|212516329|gb|EEB18342.1| Heterogeneous nuclear ribonucleoprotein A1, putative, partial
[Pediculus humanus corporis]
Length = 302
Score = 134 bits (338), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 79/200 (39%), Positives = 115/200 (57%), Gaps = 20/200 (10%)
Query: 141 HFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAI 200
H++IFVGDLSPE+ TL F+ + SD+RV+ D +T +S+G+GFVSF + +A+SAI
Sbjct: 1 HYHIFVGDLSPEIDTQTLRDAFAPFGEISDSRVVRDAQTLKSKGYGFVSFIKKSEAKSAI 60
Query: 201 NDLTGKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNP 260
+ G+WLGSR IR NWAT+ K S L E K+T+ T
Sbjct: 61 AAMNGRWLGSRSIRTNWATR-------KPSIIKADGNTLPLSFDEVYKQTSATNC----- 108
Query: 261 QYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMG 320
TVY G + +T+ + +HF G I+E++V +DKG+ FVR+ST AA AI
Sbjct: 109 ---TVYCGGITNGLTEELVQKHFSPY--GTIQEIKVFKDKGYAFVRFSTKESAAHAIVAV 163
Query: 321 NTTQSSYLFGKQMKCSWGSK 340
+ T+ + G+ +KCSWG +
Sbjct: 164 HNTE---INGQTVKCSWGKE 180
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/180 (20%), Positives = 84/180 (46%), Gaps = 27/180 (15%)
Query: 59 VYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKS----SYGFIHYFDRRSAAMAILSL 114
++VG++ ++ L++ F+ G + +++R ++ YGF+ + + A AI ++
Sbjct: 4 IFVGDLSPEIDTQTLRDAFAPFGEISDSRVVRDAQTLKSKGYGFVSFIKKSEAKSAIAAM 63
Query: 115 NGRHLFGQPIKVNWA-----------------YASGQREDTSGHFNIFVGDLSPEVTDAT 157
NGR L + I+ NWA + ++ ++ + ++ G ++ +T+
Sbjct: 64 NGRWLGSRSIRTNWATRKPSIIKADGNTLPLSFDEVYKQTSATNCTVYCGGITNGLTEEL 123
Query: 158 LFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNW 217
+ FS Y + + +V D +G+ FV F ++ A AI + + + ++C+W
Sbjct: 124 VQKHFSPYGTIQEIKVFKD------KGYAFVRFSTKESAAHAIVAVHNTEINGQTVKCSW 177
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 62/129 (48%), Gaps = 8/129 (6%)
Query: 6 LKQQQQQQQQALMQQALLQQQSLYHPGLLAAPQIEPIPSGNLPPGFD------PSTCRSV 59
+K+ + + A M L +S+ P I LP FD +T +V
Sbjct: 51 IKKSEAKSAIAAMNGRWLGSRSIRTNWATRKPSIIKADGNTLPLSFDEVYKQTSATNCTV 110
Query: 60 YVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSSYGFIHYFDRRSAAMAILSLNGRHL 119
Y G I +TE L+Q+ FS G ++ K+ KDK Y F+ + + SAA AI++++ +
Sbjct: 111 YCGGITNGLTEELVQKHFSPYGTIQEIKVF-KDK-GYAFVRFSTKESAAHAIVAVHNTEI 168
Query: 120 FGQPIKVNW 128
GQ +K +W
Sbjct: 169 NGQTVKCSW 177
>gi|357144721|ref|XP_003573391.1| PREDICTED: RNA-binding post-transcriptional regulator csx1-like
[Brachypodium distachyon]
Length = 435
Score = 134 bits (337), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 89/294 (30%), Positives = 149/294 (50%), Gaps = 30/294 (10%)
Query: 56 CRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS----YGFIHYFDRRSAAMAI 111
R++++G++ + E + F+ TG V+ KLIR ++ YGF+ + R A +
Sbjct: 97 VRTLWIGDLQYWMDENYVYGCFAHTGEVQSVKLIRDKQTGQLQGYGFVEFTTRAGAERVL 156
Query: 112 LSLNGRHL--FGQPIKVNWAYASGQREDTSGHFNIFVGDLSPEVTDATLFACFSV-YPSC 168
+ NG + P ++NWA ++G++ D + IFVGDL+ +VTD L F V YPS
Sbjct: 157 QTYNGATMPNVEMPYRLNWA-SAGEKRDDGPDYTIFVGDLAADVTDYILQETFRVHYPSV 215
Query: 169 SDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDK 228
A+V+ D+ T RS+G+GFV F + + A+ ++ G SR +R G N+ K
Sbjct: 216 KGAKVVTDKLTMRSKGYGFVKFSDPTEQTRAMTEMNGMVCSSRPMRI-----GPAANKQK 270
Query: 229 QSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGA 288
S A+ V G D ++P TT++VG L P VT+ L + F G
Sbjct: 271 -VSGAQEKVPSAQGVQSD-----------SDPSNTTIFVGGLDPNVTEDMLKQVFAPYGE 318
Query: 289 GVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSKPT 342
+ V++ K GFV+Y++ + + A+ M Q + + G+ ++ SWG P+
Sbjct: 319 --VVHVKIPVGKRCGFVQYASRSSSEEALLM---LQGTVIGGQNVRLSWGRSPS 367
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 47/85 (55%), Gaps = 3/85 (3%)
Query: 52 DPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSSYGFIHYFDRRSAAMAI 111
DPS +++VG + VTE +L++VF+ G V K+ + GF+ Y R S+ A+
Sbjct: 289 DPSNT-TIFVGGLDPNVTEDMLKQVFAPYGEVVHVKIPVGKRC--GFVQYASRSSSEEAL 345
Query: 112 LSLNGRHLFGQPIKVNWAYASGQRE 136
L L G + GQ ++++W + ++
Sbjct: 346 LMLQGTVIGGQNVRLSWGRSPSNKQ 370
>gi|449454734|ref|XP_004145109.1| PREDICTED: polyadenylate-binding protein RBP45B-like [Cucumis
sativus]
Length = 404
Score = 134 bits (337), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 94/315 (29%), Positives = 159/315 (50%), Gaps = 26/315 (8%)
Query: 43 PSGNLPPGFDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS----YGF 98
P G P + R++++G++ + E + F+ TG V K+IR ++ YGF
Sbjct: 52 PQGQPPQSANGDEVRTLWIGDLQYWMDENYIFNCFAHTGEVSSVKVIRNKQTGQSEGYGF 111
Query: 99 IHYFDRRSAAMAILSLNGRHL--FGQPIKVNWAYASGQREDTSGHFNIFVGDLSPEVTDA 156
I + R +A + + NG + Q ++NWA A +R+D S + IFVGDL+ +VTD
Sbjct: 112 IEFLTRPAAERVLQTYNGTAMPNGAQNFRLNWASAGEKRQDDSPDYTIFVGDLAGDVTDY 171
Query: 157 TLFACFSV-YPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRC 215
L F Y S A+V+ D+ TGR++G+GFV F ++ + A+ ++ G SR +R
Sbjct: 172 VLQETFRARYNSVKGAKVVIDRLTGRTKGYGFVKFGDESEQMRAMTEMNGVHCSSRPMRI 231
Query: 216 NWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVT 275
G +K +S + + + S ++ + N EN+P TT++VGNL VT
Sbjct: 232 -------GPAANKNTSGGQ---QFSKTSYQNPQGAQN----ENDPNNTTIFVGNLDANVT 277
Query: 276 QLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKC 335
L + F G V V++ K GFV+++ A A+++ N TQ + G+ ++
Sbjct: 278 DEHLRQVFGQYGELV--HVKIPVGKRCGFVQFADRNCAEEALRVLNGTQ---IGGQNIRL 332
Query: 336 SWGSKPTPPGTSSNP 350
SWG P+ ++P
Sbjct: 333 SWGRSPSNKQPQADP 347
>gi|15221071|ref|NP_172630.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|75336898|sp|Q9SAB3.1|RB45B_ARATH RecName: Full=Polyadenylate-binding protein RBP45B;
Short=Poly(A)-binding protein RBP45B; AltName:
Full=RNA-binding protein 45B; Short=AtRBP45B
gi|4835793|gb|AAD30259.1|AC007296_20 Similar to gb|U90212 DNA binding protein ACBF from Nicotiana
tabacum and contains 3 PF|00076 RNA recognition motif
domains. ESTs gb|T44278, gb|R65195, gb|N65904,
gb|H37499, gb|R90487, gb|N95952, gb|T44278, gb|Z20166,
gb|N96891, gb|W43137, gb|F15504, gb|F15495 and gb|Z30868
come from this gene [Arabidopsis thaliana]
gi|20260604|gb|AAM13200.1| similar to gb|U90212 DNA binding protein ACBF from Nicotiana
tabacum and contains 3 PF|00076 RNA recognition motif
domains [Arabidopsis thaliana]
gi|30725662|gb|AAP37853.1| At1g11650 [Arabidopsis thaliana]
gi|332190643|gb|AEE28764.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 405
Score = 134 bits (337), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 96/314 (30%), Positives = 149/314 (47%), Gaps = 37/314 (11%)
Query: 43 PSGNLPPGFDPSTC---RSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS---- 95
P PP P+T R++++G++ + E L F+ TG + K+IR ++
Sbjct: 45 PQAAAPPSVQPTTADEIRTLWIGDLQYWMDENFLYGCFAHTGEMVSAKVIRNKQTGQVEG 104
Query: 96 YGFIHYFDRRSAAMAILSLNGRHLFGQP---IKVNWA-YASGQREDTSGHFNIFVGDLSP 151
YGFI + +A + + N + P ++NWA +SG + D S + IFVGDL+
Sbjct: 105 YGFIEFASHAAAERVLQTFNNAPIPSFPDQLFRLNWASLSSGDKRDDSPDYTIFVGDLAA 164
Query: 152 EVTDATLFACF-SVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGS 210
+VTD L F + YPS A+V+ D+ TGR++G+GFV F ++ + A+ ++ G +
Sbjct: 165 DVTDYILLETFRASYPSVKGAKVVIDRVTGRTKGYGFVRFSDESEQIRAMTEMNGVPCST 224
Query: 211 RQIRCNWAT--KGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVG 268
R +R A KG D S A V +N+P TTV+VG
Sbjct: 225 RPMRIGPAASKKGVTGQRDSYQSSAAGVTT------------------DNDPNNTTVFVG 266
Query: 269 NLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYL 328
L VT L F G I V++ K GFV++S + A A++M N Q L
Sbjct: 267 GLDASVTDDHLKNVFSQYGE--IVHVKIPAGKRCGFVQFSEKSCAEEALRMLNGVQ---L 321
Query: 329 FGKQMKCSWGSKPT 342
G ++ SWG P+
Sbjct: 322 GGTTVRLSWGRSPS 335
Score = 42.0 bits (97), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 44/85 (51%), Gaps = 3/85 (3%)
Query: 52 DPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSSYGFIHYFDRRSAAMAI 111
DP+ +V+VG + VT+ L+ VFS G + K+ + GF+ + ++ A A+
Sbjct: 257 DPNNT-TVFVGGLDASVTDDHLKNVFSQYGEIVHVKIPAGKRC--GFVQFSEKSCAEEAL 313
Query: 112 LSLNGRHLFGQPIKVNWAYASGQRE 136
LNG L G ++++W + ++
Sbjct: 314 RMLNGVQLGGTTVRLSWGRSPSNKQ 338
>gi|350536139|ref|NP_001234487.1| DNA-binding protein [Solanum lycopersicum]
gi|40804404|gb|AAR91698.1| DNA-binding protein [Solanum lycopersicum]
Length = 428
Score = 134 bits (337), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 98/305 (32%), Positives = 154/305 (50%), Gaps = 34/305 (11%)
Query: 57 RSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS----YGFIHYFDRRSAAMAIL 112
R++++G++ + E L F+ G V K+IR ++ YGFI + +A +
Sbjct: 79 RTIWIGDLQQWMDEGYLHTCFAQAGEVISVKVIRNKQTGQSERYGFIEFNTHEAAEKVLQ 138
Query: 113 SLNGRHL--FGQPIKVNW-AYASGQREDTSG-------HFNIFVGDLSPEVTDATLFACF 162
S NG + QP ++NW A++SG++ G +IFVGDL+ +VTD L F
Sbjct: 139 SYNGTMMPNAEQPFRLNWSAFSSGEKRADVGAGAGSGSDLSIFVGDLASDVTDTMLRDTF 198
Query: 163 SV-YPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKG 221
S YPS A+V+ D TGRS+G+GFV F ++ + A+ ++ G + SR +R AT
Sbjct: 199 SSRYPSVKGAKVVIDSNTGRSKGYGFVRFDDESERSRAMTEMNGIYCSSRAMRIGVATP- 257
Query: 222 AGNNEDKQSSDAK----SVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQL 277
K+ S + V L G + +G T T +++ TTV+VG L EVT
Sbjct: 258 ------KKPSPMQQYFPQAVILAGGHASNGA-ATQTSQTDSDLSNTTVFVGGLDSEVTDE 310
Query: 278 DLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQ-MKCS 336
+L + F G + V++ KG GFV++S + A AI+ N T + G Q ++ S
Sbjct: 311 ELRQSFSQFGN--VVSVKIPAGKGCGFVQFSERSAAEDAIEKLNGT----VIGAQTVRLS 364
Query: 337 WGSKP 341
WG P
Sbjct: 365 WGRNP 369
>gi|356555656|ref|XP_003546146.1| PREDICTED: RNA-binding post-transcriptional regulator csx1-like
[Glycine max]
Length = 411
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 100/320 (31%), Positives = 161/320 (50%), Gaps = 31/320 (9%)
Query: 36 APQIEPIPSGNLPPGFDPST---CRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKD 92
APQ PS P P++ R++++G++ + E L F+ TG V K+IR
Sbjct: 43 APQPMWAPSAQPPLPQQPASADEVRTLWIGDLQYWMDENYLYTCFAHTGEVSSVKVIRNK 102
Query: 93 KSS----YGFIHYFDRRSAAMAILSLNGRHL--FGQPIKVNWA-YASGQR--EDTSGHFN 143
++S YGFI + R A + + NG + GQ ++NWA +++G+R +D S +
Sbjct: 103 QTSQSEGYGFIEFNSRAGAERILQTYNGAIMPNGGQSFRLNWATFSAGERSRQDDSPDYT 162
Query: 144 IFVGDLSPEVTDATLFACFSV-YPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAIND 202
IFVGDL+ +VTD L F Y S A+V+ D+ TGR++G+GFV F + + A+ +
Sbjct: 163 IFVGDLAADVTDYLLQETFRARYNSVKGAKVVIDRLTGRTKGYGFVRFSEESEQMRAMTE 222
Query: 203 LTGKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQY 262
+ G +R +R G +N+ + L S G + EN+P
Sbjct: 223 MQGVLCSTRPMRI-----GPASNKTPATQSQPKASYLN--SQPQGSQN------ENDPNN 269
Query: 263 TTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNT 322
TT++VGNL P VT L + F G V V++ K GFV+++ + A A+++ N
Sbjct: 270 TTIFVGNLDPNVTDDHLRQVFSQYGELV--HVKIPAGKRCGFVQFADRSCAEEALRVLNG 327
Query: 323 TQSSYLFGKQMKCSWGSKPT 342
T L G+ ++ SWG P+
Sbjct: 328 T---LLGGQNVRLSWGRSPS 344
>gi|50548145|ref|XP_501542.1| YALI0C07040p [Yarrowia lipolytica]
gi|49647409|emb|CAG81845.1| YALI0C07040p [Yarrowia lipolytica CLIB122]
Length = 606
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 67/164 (40%), Positives = 98/164 (59%), Gaps = 8/164 (4%)
Query: 59 VYVGNIHTQVTEPLLQEVFSSTGPVEGCKLI---RKDKSSYGFIHYFDRRSAAMAILSLN 115
+YV + V E +L ++F TGP++ K+ +K ++ FI Y D+ +A +A+ +LN
Sbjct: 257 LYVAGVDASVKESILLDLFKVTGPIKSIKIFPDRQKANINFAFIEYEDKEAAQLAMQTLN 316
Query: 116 GRHLFGQPIKVNWAYASGQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMW 175
R + GQ I V++A+ + D +N+FVGDL +V D L F+ P DARVMW
Sbjct: 317 NRQIHGQEISVSFAFQTKVERD----YNLFVGDLGADVNDEMLHKHFAHIPGLLDARVMW 372
Query: 176 DQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT 219
D TGRSRG+GFVSF +Q A+ + + G LGSR IR NWA+
Sbjct: 373 DMTTGRSRGYGFVSFETKQGAERGLIE-NGSVLGSRVIRANWAS 415
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 40/200 (20%), Positives = 78/200 (39%), Gaps = 45/200 (22%)
Query: 144 IFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDL 203
++V + V ++ L F V ++ D++ F F+ + +++ AQ A+ L
Sbjct: 257 LYVAGVDASVKESILLDLFKVTGPIKSIKIFPDRQKANIN-FAFIEYEDKEAAQLAMQTL 315
Query: 204 TGKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYT 263
+ + ++I ++A + T E N
Sbjct: 316 NNRQIHGQEISVSFAFQ------------------------------TKVERDYN----- 340
Query: 264 TVYVGNLAPEVTQLDLHRHFHS----LGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQM 319
++VG+L +V LH+HF L A V+ ++ R +G+GFV + T A +
Sbjct: 341 -LFVGDLGADVNDEMLHKHFAHIPGLLDARVMWDMTTGRSRGYGFVSFETKQGA----ER 395
Query: 320 GNTTQSSYLFGKQMKCSWGS 339
G S L + ++ +W S
Sbjct: 396 GLIENGSVLGSRVIRANWAS 415
Score = 41.2 bits (95), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 38/76 (50%), Gaps = 11/76 (14%)
Query: 57 RSVYVGNI---HTQVTEPLLQEVFSSTGPVEGCKLIRKDKSSYGFIHYFDRRSAAMAILS 113
++VY+GN+ H PLLQ G + K S+Y F+ Y + A +A++
Sbjct: 535 KTVYIGNLPNMHPSELIPLLQNF--------GYVVEFKHHSNYAFVSYDSHKRAQIAMMQ 586
Query: 114 LNGRHLFGQPIKVNWA 129
LNG ++ G+ +K W
Sbjct: 587 LNGYNIHGRTLKCGWG 602
>gi|297807995|ref|XP_002871881.1| hypothetical protein ARALYDRAFT_488820 [Arabidopsis lyrata subsp.
lyrata]
gi|297317718|gb|EFH48140.1| hypothetical protein ARALYDRAFT_488820 [Arabidopsis lyrata subsp.
lyrata]
Length = 426
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 89/295 (30%), Positives = 145/295 (49%), Gaps = 14/295 (4%)
Query: 56 CRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS----YGFIHYFDRRSAAMAI 111
R++++G++ V E L FS TG + K+IR + YGFI + +A +
Sbjct: 22 VRTLWIGDLQYWVDENYLTSCFSQTGELVSVKVIRNKITGQPEGYGFIEFISHAAAERTL 81
Query: 112 LSLNGRHLFGQPI--KVNWA-YASGQREDTSGHFNIFVGDLSPEVTDATLFACFSV-YPS 167
+ NG + G + ++NWA + SGQ+ D +IFVGDL+P+VTD L F V Y S
Sbjct: 82 QTYNGTQMPGTELTFRLNWASFGSGQKVDAGPDHSIFVGDLAPDVTDYLLQETFRVHYSS 141
Query: 168 CSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNED 227
A+V+ D TGRS+G+GFV F + + A+ ++ G + +R +R + AT
Sbjct: 142 VRGAKVVTDPSTGRSKGYGFVKFAEESERNRAMAEMNGLYCSTRPMRISAATPKKNVGVQ 201
Query: 228 KQSSDAKSVVELTNGSSEDG-KETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSL 286
+Q V + + PE++ TT+ + NL P VT+ +L + F L
Sbjct: 202 QQYVTKGPVPSAVAAPVQAYIAQPGQGLPPESDVTCTTISIANLDPNVTEEELKKAFSQL 261
Query: 287 GAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSKP 341
G I V++ KG+G+V++ T A A+Q Q + + ++ SW P
Sbjct: 262 GE--IIYVKIPATKGYGYVQFKTRPSAEEAVQ---KMQGQVIGQQAVRISWSKNP 311
>gi|344228217|gb|EGV60103.1| RNA-binding domain-containing protein [Candida tenuis ATCC 10573]
Length = 475
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 70/169 (41%), Positives = 98/169 (57%), Gaps = 6/169 (3%)
Query: 57 RSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLI---RKDKSSYGFIHYFDRRSAAMAILS 113
R +YV + + E L +VF G ++ K++ K +Y FI + + SA+ A+
Sbjct: 49 RILYVAGLDKSIDEAELSKVFGQYGSIKLIKILGDKNKLGFNYAFIEFQEPNSASDALSG 108
Query: 114 LNGRHLFGQPIKVNWAYASGQREDTSGH---FNIFVGDLSPEVTDATLFACFSVYPSCSD 170
LNG+++ I + WAY S FN+FVGDLSPEV D TL FS + S +
Sbjct: 109 LNGKNINDHIIVIKWAYHSSNANSVQSAEPVFNVFVGDLSPEVDDVTLSKAFSQFKSKRE 168
Query: 171 ARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT 219
A VMWD +T RSRG+GFV+F +Q DAQ AIN + G+ + R IRCNWA+
Sbjct: 169 AHVMWDMQTSRSRGYGFVTFLDQLDAQMAINSMNGQEVLGRVIRCNWAS 217
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 99/233 (42%), Gaps = 43/233 (18%)
Query: 144 IFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDL 203
++V L + +A L F Y S +++ D K + F+ F+ A A++ L
Sbjct: 51 LYVAGLDKSIDEAELSKVFGQYGSIKLIKILGD-KNKLGFNYAFIEFQEPNSASDALSGL 109
Query: 204 TGKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYT 263
GK + I WA SS+A SV + P N
Sbjct: 110 NGKNINDHIIVIKWAY---------HSSNANSV---------------QSAEPVFN---- 141
Query: 264 TVYVGNLAPEVTQLDLHRHFHSLG----AGVIEEVRVQRDKGFGFVRYSTHAEAALAIQM 319
V+VG+L+PEV + L + F A V+ +++ R +G+GFV + +A +AI
Sbjct: 142 -VFVGDLSPEVDDVTLSKAFSQFKSKREAHVMWDMQTSRSRGYGFVTFLDQLDAQMAI-- 198
Query: 320 GNTTQSSYLFGKQMKCSWGS---KPTPPGTSSNPL---PPPAAAPIPGLSAAD 366
N+ + G+ ++C+W S KP P + PL P A +PI L A +
Sbjct: 199 -NSMNGQEVLGRVIRCNWASHKQKPQQPFKKTTPLRTSQPLAHSPILQLPAPE 250
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 46/88 (52%), Gaps = 8/88 (9%)
Query: 263 TTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAI-QMGN 321
TTVY+GN+A Q +L G G I +++ +KG FV+Y +H AA+ I Q+
Sbjct: 386 TTVYLGNIAHFTRQEELIPLIQ--GFGYIVDLKFHPEKGCAFVKYDSHERAAMTIVQLAG 443
Query: 322 TTQSSYLFGKQMKCSWGSKPTPPGTSSN 349
L G+ +KC WG K PPG N
Sbjct: 444 FN----LNGRPLKCGWG-KDRPPGPYRN 466
>gi|357166074|ref|XP_003580589.1| PREDICTED: RNA-binding post-transcriptional regulator csx1-like
[Brachypodium distachyon]
Length = 426
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 88/294 (29%), Positives = 149/294 (50%), Gaps = 29/294 (9%)
Query: 56 CRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS----YGFIHYFDRRSAAMAI 111
R++++G++ + E + F+STG ++ KLIR ++ YGF+ + +A +
Sbjct: 87 VRTLWIGDLQYWMDETYIHGCFASTGELQSVKLIRDKQTGQLQGYGFVEFTSHAAAERVL 146
Query: 112 LSLNGRHLFGQPI--KVNWAYASGQREDTSGHFNIFVGDLSPEVTDATLFACFSV-YPSC 168
NG + + ++NWA A +R+DT + IFVGDL+ +VTD L F V YPS
Sbjct: 147 QGYNGHAMPNVDLAYRLNWASAGEKRDDTP-DYTIFVGDLAADVTDYILQETFRVHYPSV 205
Query: 169 SDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDK 228
A+V+ D+ T RS+G+GFV F + + A+ ++ G SR +R G ++
Sbjct: 206 KGAKVVTDKMTMRSKGYGFVKFGDPTEQARAMTEMNGMPCSSRPMRI-------GPAANR 258
Query: 229 QSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGA 288
+++ + V TN T +N+P TT++VG L P VT+ L + F G
Sbjct: 259 KTTGVQERVPNTN---------TQGAQSDNDPNNTTIFVGGLDPNVTEDALKQVFAPYGE 309
Query: 289 GVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSKPT 342
+ V++ K GFV++ A A+QM Q + + G+ ++ SWG P+
Sbjct: 310 --VIHVKIPVGKRCGFVQFVNRPSAEQALQM---LQGTPIGGQNVRLSWGRSPS 358
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 83/187 (44%), Gaps = 27/187 (14%)
Query: 52 DPSTCRSVYVGNIHTQVTEPLLQEVFSSTGP-VEGCKLIRKDKS----SYGFIHYFDRRS 106
D + +++VG++ VT+ +LQE F P V+G K++ + YGF+ + D
Sbjct: 173 DDTPDYTIFVGDLAADVTDYILQETFRVHYPSVKGAKVVTDKMTMRSKGYGFVKFGDPTE 232
Query: 107 AAMAILSLNGRHLFGQPIKV----------------NWAYASGQREDTSGHFNIFVGDLS 150
A A+ +NG +P+++ N Q ++ + IFVG L
Sbjct: 233 QARAMTEMNGMPCSSRPMRIGPAANRKTTGVQERVPNTNTQGAQSDNDPNNTTIFVGGLD 292
Query: 151 PEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGS 210
P VT+ L F+ Y ++ ++ G FV F N+ A+ A+ L G +G
Sbjct: 293 PNVTEDALKQVFAPYGEVIHVKIPVGKRCG------FVQFVNRPSAEQALQMLQGTPIGG 346
Query: 211 RQIRCNW 217
+ +R +W
Sbjct: 347 QNVRLSW 353
>gi|218193173|gb|EEC75600.1| hypothetical protein OsI_12307 [Oryza sativa Indica Group]
Length = 406
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 95/295 (32%), Positives = 146/295 (49%), Gaps = 28/295 (9%)
Query: 56 CRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS----YGFIHYFDRRSAAMAI 111
R++++G++ + E L FS G + K+IR ++ YGFI + A +
Sbjct: 66 VRTLWIGDLQFWMEENYLYNCFSQAGELISAKIIRNKQTGQPEGYGFIEFGSHAIAEQVL 125
Query: 112 LSLNGRHL--FGQPIKVNWAY--ASGQREDTSGHFNIFVGDLSPEVTDATLFACFSV-YP 166
NG+ + Q K+NWA A +R D + IFVGDL+ +VTD L F Y
Sbjct: 126 QGYNGQMMPNGNQVFKLNWATSGAGEKRGDDGSDYTIFVGDLASDVTDLILQDTFKAHYQ 185
Query: 167 SCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNE 226
S A+V++D+ TGRS+G+GFV F + + A+ ++ G++ SR +R A+
Sbjct: 186 SVKGAKVVFDRSTGRSKGYGFVKFGDLDEQTRAMTEMNGQYCSSRPMRIGPASNKKNIGG 245
Query: 227 DKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSL 286
+Q S + + T G+ D ++P TTV+VG L P VT L + F
Sbjct: 246 QQQPS---ATYQNTQGTDSD-----------SDPNNTTVFVGGLDPSVTDEVLKQAFSPY 291
Query: 287 GAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSKP 341
G V V++ K GFV+YS A A AI+M N +Q L G+ ++ SWG P
Sbjct: 292 GELVY--VKIPVGKRCGFVQYSNRASAEEAIRMLNGSQ---LGGQSIRLSWGRSP 341
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 48/85 (56%), Gaps = 3/85 (3%)
Query: 52 DPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSSYGFIHYFDRRSAAMAI 111
DP+ +V+VG + VT+ +L++ FS G + K+ + GF+ Y +R SA AI
Sbjct: 264 DPNNT-TVFVGGLDPSVTDEVLKQAFSPYGELVYVKIPVGKRC--GFVQYSNRASAEEAI 320
Query: 112 LSLNGRHLFGQPIKVNWAYASGQRE 136
LNG L GQ I+++W + G ++
Sbjct: 321 RMLNGSQLGGQSIRLSWGRSPGNKQ 345
>gi|12583812|gb|AAG59664.1|AC084319_22 putative RNA binding protein [Oryza sativa Japonica Group]
gi|108709397|gb|ABF97192.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|215678704|dbj|BAG95141.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 402
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 95/295 (32%), Positives = 146/295 (49%), Gaps = 28/295 (9%)
Query: 56 CRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS----YGFIHYFDRRSAAMAI 111
R++++G++ + E L FS G + K+IR ++ YGFI + A +
Sbjct: 66 VRTLWIGDLQFWMEENYLYNCFSQAGELISAKIIRNKQTGQPEGYGFIEFGSHAIAEQVL 125
Query: 112 LSLNGRHL--FGQPIKVNWAY--ASGQREDTSGHFNIFVGDLSPEVTDATLFACFSV-YP 166
NG+ + Q K+NWA A +R D + IFVGDL+ +VTD L F Y
Sbjct: 126 QGYNGQMMPNGNQVFKLNWATSGAGEKRGDDGSDYTIFVGDLASDVTDLILQDTFKAHYQ 185
Query: 167 SCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNE 226
S A+V++D+ TGRS+G+GFV F + + A+ ++ G++ SR +R A+
Sbjct: 186 SVKGAKVVFDRSTGRSKGYGFVKFGDLDEQTRAMTEMNGQYCSSRPMRIGPASNKKNIGG 245
Query: 227 DKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSL 286
+Q S + + T G+ D ++P TTV+VG L P VT L + F
Sbjct: 246 QQQPS---ATYQNTQGTDSD-----------SDPNNTTVFVGGLDPSVTDEVLKQAFSPY 291
Query: 287 GAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSKP 341
G V V++ K GFV+YS A A AI+M N +Q L G+ ++ SWG P
Sbjct: 292 GELVY--VKIPVGKRCGFVQYSNRASAEEAIRMLNGSQ---LGGQSIRLSWGRSP 341
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 48/85 (56%), Gaps = 3/85 (3%)
Query: 52 DPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSSYGFIHYFDRRSAAMAI 111
DP+ +V+VG + VT+ +L++ FS G + K+ + GF+ Y +R SA AI
Sbjct: 264 DPNNT-TVFVGGLDPSVTDEVLKQAFSPYGELVYVKIPVGKRC--GFVQYSNRASAEEAI 320
Query: 112 LSLNGRHLFGQPIKVNWAYASGQRE 136
LNG L GQ I+++W + G ++
Sbjct: 321 RMLNGSQLGGQSIRLSWGRSPGNKQ 345
>gi|108709398|gb|ABF97193.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
Length = 406
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 95/295 (32%), Positives = 146/295 (49%), Gaps = 28/295 (9%)
Query: 56 CRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS----YGFIHYFDRRSAAMAI 111
R++++G++ + E L FS G + K+IR ++ YGFI + A +
Sbjct: 66 VRTLWIGDLQFWMEENYLYNCFSQAGELISAKIIRNKQTGQPEGYGFIEFGSHAIAEQVL 125
Query: 112 LSLNGRHL--FGQPIKVNWAY--ASGQREDTSGHFNIFVGDLSPEVTDATLFACFSV-YP 166
NG+ + Q K+NWA A +R D + IFVGDL+ +VTD L F Y
Sbjct: 126 QGYNGQMMPNGNQVFKLNWATSGAGEKRGDDGSDYTIFVGDLASDVTDLILQDTFKAHYQ 185
Query: 167 SCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNE 226
S A+V++D+ TGRS+G+GFV F + + A+ ++ G++ SR +R A+
Sbjct: 186 SVKGAKVVFDRSTGRSKGYGFVKFGDLDEQTRAMTEMNGQYCSSRPMRIGPASNKKNIGG 245
Query: 227 DKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSL 286
+Q S + + T G+ D ++P TTV+VG L P VT L + F
Sbjct: 246 QQQPS---ATYQNTQGTDSD-----------SDPNNTTVFVGGLDPSVTDEVLKQAFSPY 291
Query: 287 GAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSKP 341
G V V++ K GFV+YS A A AI+M N +Q L G+ ++ SWG P
Sbjct: 292 GELVY--VKIPVGKRCGFVQYSNRASAEEAIRMLNGSQ---LGGQSIRLSWGRSP 341
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 48/85 (56%), Gaps = 3/85 (3%)
Query: 52 DPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSSYGFIHYFDRRSAAMAI 111
DP+ +V+VG + VT+ +L++ FS G + K+ + GF+ Y +R SA AI
Sbjct: 264 DPNNT-TVFVGGLDPSVTDEVLKQAFSPYGELVYVKIPVGKRC--GFVQYSNRASAEEAI 320
Query: 112 LSLNGRHLFGQPIKVNWAYASGQRE 136
LNG L GQ I+++W + G ++
Sbjct: 321 RMLNGSQLGGQSIRLSWGRSPGNKQ 345
>gi|255563907|ref|XP_002522953.1| nuclear acid binding protein, putative [Ricinus communis]
gi|223537765|gb|EEF39383.1| nuclear acid binding protein, putative [Ricinus communis]
Length = 404
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 93/299 (31%), Positives = 156/299 (52%), Gaps = 35/299 (11%)
Query: 56 CRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS----YGFIHYFDRRSAAMAI 111
+S+++G++ + E L +FS TG V K+IR ++ YGFI + +R +A +
Sbjct: 65 IKSLWIGDLQQWMDEGYLFNIFSGTGEVVSAKVIRNKQTGMPEGYGFIEFINRAAAERIL 124
Query: 112 LSLNGRHL--FGQPIKVNWA-YASGQREDTSG-HFNIFVGDLSPEVTDATLFACF-SVYP 166
+ NG + Q ++NWA A+G+R G + +FVGDL+P+V D L F +VYP
Sbjct: 125 QTYNGTQMPNTEQNFRLNWATLAAGERRQDDGPDYTVFVGDLAPDVNDFILQETFRTVYP 184
Query: 167 SCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNE 226
S A+V+ D+ TGR++G+GFV F ++ + + A+ ++ G++ +R +R A +
Sbjct: 185 SVKGAKVVTDRLTGRTKGYGFVRFGDENEQRRAMVEMNGQYCSTRAMRIGPAATKKPAVQ 244
Query: 227 DKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSL 286
Q + +S T T+ EN+P TT++VG L P V+ L + F
Sbjct: 245 QYQKAPYQS--------------TQGTQG-ENDPNNTTIFVGALDPSVSDEHLRQVFGKY 289
Query: 287 GAGVIEEVRVQRDKGFGFVRYSTHA---EAALAIQMGNTTQSSYLFGKQMKCSWGSKPT 342
G V V++ K GFV+++ A +A L + N TQ L G+ ++ SWG P+
Sbjct: 290 GELV--HVKIPAGKRCGFVQFANRACAEQALLGL---NGTQ---LAGQSIRLSWGRSPS 340
Score = 45.8 bits (107), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 43/78 (55%), Gaps = 3/78 (3%)
Query: 52 DPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSSYGFIHYFDRRSAAMAI 111
DP+ +++VG + V++ L++VF G + K+ + GF+ + +R A A+
Sbjct: 262 DPNNT-TIFVGALDPSVSDEHLRQVFGKYGELVHVKIPAGKRC--GFVQFANRACAEQAL 318
Query: 112 LSLNGRHLFGQPIKVNWA 129
L LNG L GQ I+++W
Sbjct: 319 LGLNGTQLAGQSIRLSWG 336
>gi|357454295|ref|XP_003597428.1| RNA-binding protein [Medicago truncatula]
gi|355486476|gb|AES67679.1| RNA-binding protein [Medicago truncatula]
Length = 428
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 97/300 (32%), Positives = 151/300 (50%), Gaps = 18/300 (6%)
Query: 56 CRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS----YGFIHYFDRRSAAMAI 111
R++++G++ V E L FS TG V K+IR + YGFI + +A +
Sbjct: 14 VRTLWIGDLQYWVDENYLTHCFSHTGEVISIKIIRNKITGQPEGYGFIEFVSHSAAERVL 73
Query: 112 LSLNGRHLFG--QPIKVNWA-YASGQREDTSG-HFNIFVGDLSPEVTDATLFACFSV-YP 166
+ NG + G Q ++NWA + G+R +G +IFVGDL+P+VTD L F Y
Sbjct: 74 QTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPDHSIFVGDLAPDVTDYLLQETFRTHYG 133
Query: 167 SCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT--KGAGN 224
S A+V+ D TGRS+G+GFV F ++ + A++++ G + +R +R + AT K G
Sbjct: 134 SVRGAKVVTDPNTGRSKGYGFVKFSDESERNRAMSEMNGVYCSTRPMRISAATPKKTTGY 193
Query: 225 NEDKQSSDAKSVVELTNGSSEDGKET--TNTEAPENNPQYTTVYVGNLAPEVTQLDLHRH 282
++ ++ + T NT PE + TT+YVGNL V++ +L ++
Sbjct: 194 QQNPYAAVVAAAPVPKAIYPVPAYTTAPVNTVPPEYDVNNTTIYVGNLDLNVSEEELKQN 253
Query: 283 FHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSKPT 342
F L G I V+V K GFV++ A A AIQ Q L + ++ SWG T
Sbjct: 254 F--LQFGEIVSVKVHPGKACGFVQFGARASAEEAIQ---KMQGKILGQQVIRVSWGRPQT 308
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 51/108 (47%), Gaps = 3/108 (2%)
Query: 33 LLAAPQIEPIPSGNLPPGFDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKD 92
+ P P +PP +D + ++YVGN+ V+E L++ F G + K+
Sbjct: 211 IYPVPAYTTAPVNTVPPEYDVNNT-TIYVGNLDLNVSEEELKQNFLQFGEIVSVKV--HP 267
Query: 93 KSSYGFIHYFDRRSAAMAILSLNGRHLFGQPIKVNWAYASGQREDTSG 140
+ GF+ + R SA AI + G+ L Q I+V+W R+D G
Sbjct: 268 GKACGFVQFGARASAEEAIQKMQGKILGQQVIRVSWGRPQTARQDVPG 315
>gi|213401961|ref|XP_002171753.1| RNA-binding post-transcriptional regulator csx1
[Schizosaccharomyces japonicus yFS275]
gi|211999800|gb|EEB05460.1| RNA-binding post-transcriptional regulator csx1
[Schizosaccharomyces japonicus yFS275]
Length = 476
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 95/293 (32%), Positives = 154/293 (52%), Gaps = 25/293 (8%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS----YGFIHYFDRRSAAMAILS 113
++++G + +TE ++Q++++S G K+IR S Y F+ F+ ++AM +S
Sbjct: 99 TLWMGELAPFITEAMVQQIWNSLGENVNVKIIRDRYSGLNAGYCFVE-FNSPASAMKAMS 157
Query: 114 LNGRHLFG--QPIKVNWAYASG---QREDTSGHFNIFVGDLSPEVTDATLFACF-SVYPS 167
LNG + G + K+NWA G +RE + F+IFVGDL PEVT+ L + F S Y S
Sbjct: 158 LNGTVIPGTNRFFKLNWASGGGLHDRREGKTPEFSIFVGDLGPEVTEPMLLSLFQSRYRS 217
Query: 168 CSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNED 227
C A++M D T SRG+GFV F ++ D + A+ ++ G + G+R +R AT + N+
Sbjct: 218 CKSAKIMMDSNTNLSRGYGFVRFYDENDQKRALTEMQGVYCGNRPMRIAMATPKSKNHMY 277
Query: 228 KQSSDAKSVVELTN--GSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHS 285
+ ++ G+ + + T +P TTV+VG L+ VT+ +L F +
Sbjct: 278 SPMNMMHIGLQPVGFYGAPQPVNQFT-------DPTNTTVFVGGLSGYVTEEELRFLFQN 330
Query: 286 LGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWG 338
G I V++ KG GFV++ A LAI N Q L +++ SWG
Sbjct: 331 FGE--IIYVKIPPGKGCGFVQFVNRQSAELAI---NQMQGYPLGKSRIRLSWG 378
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 86/201 (42%), Gaps = 42/201 (20%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCK--LIRKDKSS-----YGFIHYFDRRSAAMA 110
S++VG++ +VTEP+L +F S CK I D ++ YGF+ ++D A
Sbjct: 192 SIFVGDLGPEVTEPMLLSLFQSR--YRSCKSAKIMMDSNTNLSRGYGFVRFYDENDQKRA 249
Query: 111 ILSLNGRHLFGQPIKVNWAYASGQREDTS------------GHF---------------N 143
+ + G + +P+++ A + S G +
Sbjct: 250 LTEMQGVYCGNRPMRIAMATPKSKNHMYSPMNMMHIGLQPVGFYGAPQPVNQFTDPTNTT 309
Query: 144 IFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDL 203
+FVG LS VT+ L F + +++ K +G GFV F N+Q A+ AIN +
Sbjct: 310 VFVGGLSGYVTEEELRFLFQNF-----GEIIY-VKIPPGKGCGFVQFVNRQSAELAINQM 363
Query: 204 TGKWLGSRQIRCNWATKGAGN 224
G LG +IR +W GN
Sbjct: 364 QGYPLGKSRIRLSWGRSQGGN 384
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/183 (22%), Positives = 85/183 (46%), Gaps = 39/183 (21%)
Query: 134 QREDTSGHFN--IFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFR 191
++T+ H N +++G+L+P +T+A + ++ + +++ D+ +G + G+ FV F
Sbjct: 88 NNDETASHNNSTLWMGELAPFITEAMVQQIWNSLGENVNVKIIRDRYSGLNAGYCFVEFN 147
Query: 192 NQQDAQSAINDLTGKWL--GSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKE 249
+ A A+ L G + +R + NWA+ G ++ +GK
Sbjct: 148 SPASAMKAM-SLNGTVIPGTNRFFKLNWASGGGLHDR------------------REGKT 188
Query: 250 TTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSL-----GAGVIEEVRVQRDKGFGF 304
P++ +++VG+L PEVT+ L F S A ++ + +G+GF
Sbjct: 189 ----------PEF-SIFVGDLGPEVTEPMLLSLFQSRYRSCKSAKIMMDSNTNLSRGYGF 237
Query: 305 VRY 307
VR+
Sbjct: 238 VRF 240
Score = 39.3 bits (90), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 42/83 (50%), Gaps = 2/83 (2%)
Query: 51 FDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSSYGFIHYFDRRSAAMA 110
F T +V+VG + VTE L+ +F + G + K+ GF+ + +R+SA +A
Sbjct: 302 FTDPTNTTVFVGGLSGYVTEEELRFLFQNFGEIIYVKI--PPGKGCGFVQFVNRQSAELA 359
Query: 111 ILSLNGRHLFGQPIKVNWAYASG 133
I + G L I+++W + G
Sbjct: 360 INQMQGYPLGKSRIRLSWGRSQG 382
>gi|414589689|tpg|DAA40260.1| TPA: hypothetical protein ZEAMMB73_589753 [Zea mays]
Length = 424
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 93/296 (31%), Positives = 147/296 (49%), Gaps = 37/296 (12%)
Query: 57 RSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS----YGFIHYFDRRSAAMAIL 112
++++VG++H + E L F TG V K+IR ++ YGF+ ++ +A +
Sbjct: 92 KTIWVGDLHFWMDENYLHNCFGYTGEVVAIKVIRNKQTGQSEGYGFVEFYSHAAAERVLE 151
Query: 113 SLNGRHLF---GQPIKVNWAYAS--GQREDTSGHFNIFVGDLSPEVTDATLFACFSV-YP 166
+G H+ QP ++NWA S +R D + +IFVGDL+ +V DATL FS Y
Sbjct: 152 GFSG-HIMPNTDQPFRLNWASFSMGDRRSDVASDHSIFVGDLASDVNDATLLEVFSSRYS 210
Query: 167 SCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNE 226
S A+V+ D TGRS+G+GFV F + + A+ ++ G + SR +R AT
Sbjct: 211 SVKGAKVVIDANTGRSKGYGFVRFGDDSEKTHAMTEMNGVYCSSRPMRIGPATP------ 264
Query: 227 DKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSL 286
+ + + + DG + TN TTV+VG L P+V++ DL + F
Sbjct: 265 ---RKSSGTSGSNGSSARPDGGDLTN----------TTVFVGGLDPDVSEEDLRQAFSQY 311
Query: 287 GAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQ-MKCSWGSKP 341
G I V++ K GFV+++ A A+Q N + GKQ ++ SWG P
Sbjct: 312 GE--ISSVKIPVGKQCGFVQFAQRKNAEDALQGLNGS----TIGKQAVRLSWGRNP 361
>gi|116788528|gb|ABK24911.1| unknown [Picea sitchensis]
Length = 397
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 100/313 (31%), Positives = 157/313 (50%), Gaps = 24/313 (7%)
Query: 56 CRSVYVGNIHTQVTEPLLQEVFSSTGPVE-GCKLIRKDKSS----YGFIHYFDRRSAAMA 110
++++VG++ + E LQ FSS G V K+IR ++ YGF+ R SA
Sbjct: 50 IKTLWVGDLQYWMDENYLQTCFSSNGEVVVSVKIIRNKQTGQPEGYGFVELDSRASAERI 109
Query: 111 ILSLNGRHLFG--QPIKVNWA-YASGQREDTSGH-FNIFVGDLSPEVTDATLFACF-SVY 165
+ +L+G + P ++NWA + +G R G ++IFVGDL PEV D L F S Y
Sbjct: 110 LQTLHGTPMPNSPHPFRLNWATFGAGDRRTEPGTGYSIFVGDLGPEVIDILLQETFQSRY 169
Query: 166 PSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNN 225
S A+V+ D TGR++G+GFV F ++ + A+ ++ G + SR +R N AT
Sbjct: 170 SSVKSAKVVIDANTGRTKGYGFVRFGDENEKNRAMTEMNGVYCCSRPMRINEATPKKSLG 229
Query: 226 EDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHS 285
+ S + G + G+ + +N+P TT++VG L P T DL + F
Sbjct: 230 LQQSYSMKGNYYTQAYGGAVAGQGFQS----DNDPNNTTIFVGGLDPNATDEDLRQVFGP 285
Query: 286 LGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQ-MKCSWGSKPTPP 344
G I V++ KG GFV+++ + A A+Q + T + G+Q ++ SWG P
Sbjct: 286 FGE--IVYVKIPVGKGCGFVQFTNRSSAEEALQKLHGT----IIGQQSIRLSWGRSPANK 339
Query: 345 GTSS---NPLPPP 354
T+S P P P
Sbjct: 340 QTASWGVQPQPDP 352
>gi|125549823|gb|EAY95645.1| hypothetical protein OsI_17510 [Oryza sativa Indica Group]
Length = 426
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 90/292 (30%), Positives = 149/292 (51%), Gaps = 35/292 (11%)
Query: 56 CRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS----YGFIHYFDRRSAAMAI 111
+++++G++ + E + F++TG V+ KLIR +S YGF+ + R +A +
Sbjct: 90 VKTLWIGDLQPWMDESYIYNCFAATGEVQSVKLIRDKQSGQLQGYGFVEFTSRAAADRIL 149
Query: 112 LSLNGRHL--FGQPIKVNWAYASGQREDTSGHFNIFVGDLSPEVTDATLFACFSV-YPSC 168
+ NG+ + ++NWA A +R+DT + IFVGDL+ +VTD L F V YPS
Sbjct: 150 QTYNGQMMPNVEMVFRLNWASAGEKRDDTP-DYTIFVGDLAADVTDYLLQETFRVHYPSV 208
Query: 169 SDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDK 228
A+V+ D+ T RS+G+GFV F + + A+ ++ G SR +R G +K
Sbjct: 209 KGAKVVTDKMTMRSKGYGFVKFGDPTEQARAMTEMNGMLCSSRPMRI-------GPAANK 261
Query: 229 QSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGA 288
+++ + V G+ EN+P TT++VG L P VT+ L + F G
Sbjct: 262 KTTGVQERVPNAQGAQS-----------ENDPNNTTIFVGGLDPNVTEDVLKQVFAPYGE 310
Query: 289 GVIEEVRVQRDKGFGFVRYSTH--AEAALAIQMGNTTQSSYLFGKQMKCSWG 338
+ V++ K GFV+Y AE ALA+ Q + + G+ ++ SWG
Sbjct: 311 --VVHVKIPVGKRCGFVQYVNRPSAEQALAV-----LQGTLIGGQNVRLSWG 355
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 52 DPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSSYGFIHYFDRRSAAMAI 111
DP+ +++VG + VTE +L++VF+ G V K+ + GF+ Y +R SA A+
Sbjct: 281 DPNNT-TIFVGGLDPNVTEDVLKQVFAPYGEVVHVKIPVGKRC--GFVQYVNRPSAEQAL 337
Query: 112 LSLNGRHLFGQPIKVNWA 129
L G + GQ ++++W
Sbjct: 338 AVLQGTLIGGQNVRLSWG 355
>gi|18416906|ref|NP_567764.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|75331668|sp|Q93W34.1|RP45C_ARATH RecName: Full=Polyadenylate-binding protein RBP45C;
Short=Poly(A)-binding protein RBP45C; AltName:
Full=RNA-binding protein 45C; Short=AtRBP45C
gi|13878153|gb|AAK44154.1|AF370339_1 putative DNA binding protein [Arabidopsis thaliana]
gi|15450814|gb|AAK96678.1| putative DNA binding protein [Arabidopsis thaliana]
gi|17104569|gb|AAL34173.1| putative DNA binding protein [Arabidopsis thaliana]
gi|20259888|gb|AAM13291.1| putative DNA binding protein [Arabidopsis thaliana]
gi|332659882|gb|AEE85282.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 415
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 92/296 (31%), Positives = 149/296 (50%), Gaps = 31/296 (10%)
Query: 56 CRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSSY----GFIHYFDRRSAAMAI 111
RS+++G++ + E L VF TG K+IR ++ Y GFI + + +A +
Sbjct: 79 IRSLWIGDLQPWMDENYLMNVFGLTGEATAAKVIRNKQNGYSEGYGFIEFVNHATAERNL 138
Query: 112 LSLNGRHLFG--QPIKVNWA-YASGQREDTSG-HFNIFVGDLSPEVTDATLFACF-SVYP 166
+ NG + Q ++NWA +G+R G +FVGDL+P+VTD L F +VY
Sbjct: 139 QTYNGAPMPSSEQAFRLNWAQLGAGERRQAEGPEHTVFVGDLAPDVTDHMLTETFKAVYS 198
Query: 167 SCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNE 226
S A+V+ D+ TGRS+G+GFV F ++ + A+ ++ G++ SR +R G N+
Sbjct: 199 SVKGAKVVNDRTTGRSKGYGFVRFADESEQIRAMTEMNGQYCSSRPMRT-----GPAANK 253
Query: 227 DKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSL 286
+ S + T + E++P TT++VG + VT+ DL F
Sbjct: 254 KPLTMQPASY------------QNTQGNSGESDPTNTTIFVGAVDQSVTEDDLKSVFGQF 301
Query: 287 GAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSKPT 342
G V V++ K GFV+Y+ A A A+ + N TQ L G+ ++ SWG P+
Sbjct: 302 GELV--HVKIPAGKRCGFVQYANRACAEQALSVLNGTQ---LGGQSIRLSWGRSPS 352
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 44/85 (51%), Gaps = 3/85 (3%)
Query: 52 DPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSSYGFIHYFDRRSAAMAI 111
DP T +++VG + VTE L+ VF G + K+ + GF+ Y +R A A+
Sbjct: 274 DP-TNTTIFVGAVDQSVTEDDLKSVFGQFGELVHVKIPAGKRC--GFVQYANRACAEQAL 330
Query: 112 LSLNGRHLFGQPIKVNWAYASGQRE 136
LNG L GQ I+++W + ++
Sbjct: 331 SVLNGTQLGGQSIRLSWGRSPSNKQ 355
>gi|115453831|ref|NP_001050516.1| Os03g0569900 [Oryza sativa Japonica Group]
gi|113548987|dbj|BAF12430.1| Os03g0569900, partial [Oryza sativa Japonica Group]
Length = 446
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 95/295 (32%), Positives = 146/295 (49%), Gaps = 28/295 (9%)
Query: 56 CRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS----YGFIHYFDRRSAAMAI 111
R++++G++ + E L FS G + K+IR ++ YGFI + A +
Sbjct: 110 VRTLWIGDLQFWMEENYLYNCFSQAGELISAKIIRNKQTGQPEGYGFIEFGSHAIAEQVL 169
Query: 112 LSLNGRHL--FGQPIKVNWAY--ASGQREDTSGHFNIFVGDLSPEVTDATLFACFSV-YP 166
NG+ + Q K+NWA A +R D + IFVGDL+ +VTD L F Y
Sbjct: 170 QGYNGQMMPNGNQVFKLNWATSGAGEKRGDDGSDYTIFVGDLASDVTDLILQDTFKAHYQ 229
Query: 167 SCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNE 226
S A+V++D+ TGRS+G+GFV F + + A+ ++ G++ SR +R A+
Sbjct: 230 SVKGAKVVFDRSTGRSKGYGFVKFGDLDEQTRAMTEMNGQYCSSRPMRIGPASNKKNIGG 289
Query: 227 DKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSL 286
+Q S + + T G+ D ++P TTV+VG L P VT L + F
Sbjct: 290 QQQPS---ATYQNTQGTDSD-----------SDPNNTTVFVGGLDPSVTDEVLKQAFSPY 335
Query: 287 GAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSKP 341
G V V++ K GFV+YS A A AI+M N +Q L G+ ++ SWG P
Sbjct: 336 GELVY--VKIPVGKRCGFVQYSNRASAEEAIRMLNGSQ---LGGQSIRLSWGRSP 385
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 48/85 (56%), Gaps = 3/85 (3%)
Query: 52 DPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSSYGFIHYFDRRSAAMAI 111
DP+ +V+VG + VT+ +L++ FS G + K+ + GF+ Y +R SA AI
Sbjct: 308 DPNNT-TVFVGGLDPSVTDEVLKQAFSPYGELVYVKIPVGKRC--GFVQYSNRASAEEAI 364
Query: 112 LSLNGRHLFGQPIKVNWAYASGQRE 136
LNG L GQ I+++W + G ++
Sbjct: 365 RMLNGSQLGGQSIRLSWGRSPGNKQ 389
>gi|115460682|ref|NP_001053941.1| Os04g0625800 [Oryza sativa Japonica Group]
gi|113565512|dbj|BAF15855.1| Os04g0625800 [Oryza sativa Japonica Group]
gi|215767966|dbj|BAH00195.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 425
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 90/292 (30%), Positives = 149/292 (51%), Gaps = 35/292 (11%)
Query: 56 CRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKS----SYGFIHYFDRRSAAMAI 111
+++++G++ + E + F++TG V+ KLIR +S YGF+ + R +A +
Sbjct: 89 VKTLWIGDLQPWMDESYIYNCFAATGEVQSVKLIRDKQSGQLQGYGFVEFTSRAAADRIL 148
Query: 112 LSLNGRHL--FGQPIKVNWAYASGQREDTSGHFNIFVGDLSPEVTDATLFACFSV-YPSC 168
+ NG+ + ++NWA A +R+DT + IFVGDL+ +VTD L F V YPS
Sbjct: 149 QTYNGQMMPNVEMVFRLNWASAGEKRDDTP-DYTIFVGDLAADVTDYLLQETFRVHYPSV 207
Query: 169 SDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDK 228
A+V+ D+ T RS+G+GFV F + + A+ ++ G SR +R G +K
Sbjct: 208 KGAKVVTDKMTMRSKGYGFVKFGDPTEQARAMTEMNGMLCSSRPMRI-------GPAANK 260
Query: 229 QSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGA 288
+++ + V G+ EN+P TT++VG L P VT+ L + F G
Sbjct: 261 KTTGVQERVPNAQGAQS-----------ENDPNNTTIFVGGLDPNVTEDVLKQVFAPYGE 309
Query: 289 GVIEEVRVQRDKGFGFVRYSTH--AEAALAIQMGNTTQSSYLFGKQMKCSWG 338
+ V++ K GFV+Y AE ALA+ Q + + G+ ++ SWG
Sbjct: 310 --VVHVKIPVGKRCGFVQYVNRPSAEQALAV-----LQGTLIGGQNVRLSWG 354
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 52 DPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSSYGFIHYFDRRSAAMAI 111
DP+ +++VG + VTE +L++VF+ G V K+ + GF+ Y +R SA A+
Sbjct: 280 DPNNT-TIFVGGLDPNVTEDVLKQVFAPYGEVVHVKIPVGKRC--GFVQYVNRPSAEQAL 336
Query: 112 LSLNGRHLFGQPIKVNWA 129
L G + GQ ++++W
Sbjct: 337 AVLQGTLIGGQNVRLSWG 354
>gi|39545835|emb|CAE04743.3| OSJNBb0060E08.6 [Oryza sativa Japonica Group]
gi|116309791|emb|CAH66831.1| OSIGBa0148A10.8 [Oryza sativa Indica Group]
Length = 414
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 90/292 (30%), Positives = 149/292 (51%), Gaps = 35/292 (11%)
Query: 56 CRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKS----SYGFIHYFDRRSAAMAI 111
+++++G++ + E + F++TG V+ KLIR +S YGF+ + R +A +
Sbjct: 78 VKTLWIGDLQPWMDESYIYNCFAATGEVQSVKLIRDKQSGQLQGYGFVEFTSRAAADRIL 137
Query: 112 LSLNGRHL--FGQPIKVNWAYASGQREDTSGHFNIFVGDLSPEVTDATLFACFSV-YPSC 168
+ NG+ + ++NWA A +R+DT + IFVGDL+ +VTD L F V YPS
Sbjct: 138 QTYNGQMMPNVEMVFRLNWASAGEKRDDTP-DYTIFVGDLAADVTDYLLQETFRVHYPSV 196
Query: 169 SDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDK 228
A+V+ D+ T RS+G+GFV F + + A+ ++ G SR +R G +K
Sbjct: 197 KGAKVVTDKMTMRSKGYGFVKFGDPTEQARAMTEMNGMLCSSRPMRI-------GPAANK 249
Query: 229 QSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGA 288
+++ + V G+ EN+P TT++VG L P VT+ L + F G
Sbjct: 250 KTTGVQERVPNAQGAQS-----------ENDPNNTTIFVGGLDPNVTEDVLKQVFAPYGE 298
Query: 289 GVIEEVRVQRDKGFGFVRYSTH--AEAALAIQMGNTTQSSYLFGKQMKCSWG 338
+ V++ K GFV+Y AE ALA+ Q + + G+ ++ SWG
Sbjct: 299 --VVHVKIPVGKRCGFVQYVNRPSAEQALAV-----LQGTLIGGQNVRLSWG 343
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 52 DPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSSYGFIHYFDRRSAAMAI 111
DP+ +++VG + VTE +L++VF+ G V K+ + GF+ Y +R SA A+
Sbjct: 269 DPNNT-TIFVGGLDPNVTEDVLKQVFAPYGEVVHVKIPVGKRC--GFVQYVNRPSAEQAL 325
Query: 112 LSLNGRHLFGQPIKVNWA 129
L G + GQ ++++W
Sbjct: 326 AVLQGTLIGGQNVRLSWG 343
>gi|4455223|emb|CAB36546.1| putative DNA binding protein [Arabidopsis thaliana]
gi|7269553|emb|CAB79555.1| putative DNA binding protein [Arabidopsis thaliana]
Length = 427
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 92/296 (31%), Positives = 149/296 (50%), Gaps = 31/296 (10%)
Query: 56 CRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSSY----GFIHYFDRRSAAMAI 111
RS+++G++ + E L VF TG K+IR ++ Y GFI + + +A +
Sbjct: 79 IRSLWIGDLQPWMDENYLMNVFGLTGEATAAKVIRNKQNGYSEGYGFIEFVNHATAERNL 138
Query: 112 LSLNGRHLFG--QPIKVNWA-YASGQREDTSG-HFNIFVGDLSPEVTDATLFACF-SVYP 166
+ NG + Q ++NWA +G+R G +FVGDL+P+VTD L F +VY
Sbjct: 139 QTYNGAPMPSSEQAFRLNWAQLGAGERRQAEGPEHTVFVGDLAPDVTDHMLTETFKAVYS 198
Query: 167 SCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNE 226
S A+V+ D+ TGRS+G+GFV F ++ + A+ ++ G++ SR +R G N+
Sbjct: 199 SVKGAKVVNDRTTGRSKGYGFVRFADESEQIRAMTEMNGQYCSSRPMRT-----GPAANK 253
Query: 227 DKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSL 286
+ S + T + E++P TT++VG + VT+ DL F
Sbjct: 254 KPLTMQPASY------------QNTQGNSGESDPTNTTIFVGAVDQSVTEDDLKSVFGQF 301
Query: 287 GAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSKPT 342
G V V++ K GFV+Y+ A A A+ + N TQ L G+ ++ SWG P+
Sbjct: 302 GELV--HVKIPAGKRCGFVQYANRACAEQALSVLNGTQ---LGGQSIRLSWGRSPS 352
Score = 46.6 bits (109), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 44/85 (51%), Gaps = 3/85 (3%)
Query: 52 DPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSSYGFIHYFDRRSAAMAI 111
DP T +++VG + VTE L+ VF G + K+ + GF+ Y +R A A+
Sbjct: 274 DP-TNTTIFVGAVDQSVTEDDLKSVFGQFGELVHVKIPAGKRC--GFVQYANRACAEQAL 330
Query: 112 LSLNGRHLFGQPIKVNWAYASGQRE 136
LNG L GQ I+++W + ++
Sbjct: 331 SVLNGTQLGGQSIRLSWGRSPSNKQ 355
>gi|302795494|ref|XP_002979510.1| hypothetical protein SELMODRAFT_111082 [Selaginella moellendorffii]
gi|300152758|gb|EFJ19399.1| hypothetical protein SELMODRAFT_111082 [Selaginella moellendorffii]
Length = 432
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 91/302 (30%), Positives = 160/302 (52%), Gaps = 21/302 (6%)
Query: 56 CRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSSY----GFIHYFDRRSAAMAI 111
R++++G++ + E L+ +F+ TG V K+IR ++ Y GFI + +A +
Sbjct: 27 VRTLWIGDLQYWMDENYLRNLFAHTGEVLSAKVIRNKQTGYPEGYGFIEFNSHPAAERVL 86
Query: 112 LSLNGRHL--FGQPIKVNWA-YASGQ-REDTSGHFNIFVGDLSPEVTDATLFACFSV-YP 166
L+ NG + Q ++NWA + G+ R D +IFVGDL+P+VTD L F +P
Sbjct: 87 LAYNGTQMPQTEQAFRLNWASFGMGEKRMDGGPELSIFVGDLAPDVTDYMLHETFRTRFP 146
Query: 167 SCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNE 226
S A+V+ D TGRS+G+GFV F ++ + A++++ G + SR +R + AT
Sbjct: 147 SVRGAKVVIDAVTGRSKGYGFVRFADENERARAMSEMNGVYCSSRPMRISAATPKKAMAA 206
Query: 227 DKQSSDAKSVV-ELTNGSSEDGKETTNTEA----PENNPQYTTVYVGNLAPEVTQLDLHR 281
+ A ++V + T S + + ++ P+++P TT++VG L +T+ ++ +
Sbjct: 207 GLTTVTAATIVPQPTIASPITPPPSLSIQSQVLPPDSDPTNTTIFVGGLDLNITEEEVKQ 266
Query: 282 HFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQ-MKCSWGSK 340
F +G V V++ KG FV+Y+ A A+Q + T + G+Q ++ SWG
Sbjct: 267 TFSHIGELV--SVKIPPGKGCAFVQYAQRNSAEDALQRLHGT----VIGQQAIRLSWGRS 320
Query: 341 PT 342
PT
Sbjct: 321 PT 322
Score = 42.7 bits (99), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 49/99 (49%), Gaps = 7/99 (7%)
Query: 34 LAAPQIEP----IPSGNLPPGFDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLI 89
+A+P P I S LPP DP T +++VG + +TE +++ FS G + K+
Sbjct: 222 IASPITPPPSLSIQSQVLPPDSDP-TNTTIFVGGLDLNITEEEVKQTFSHIGELVSVKI- 279
Query: 90 RKDKSSYGFIHYFDRRSAAMAILSLNGRHLFGQPIKVNW 128
F+ Y R SA A+ L+G + Q I+++W
Sbjct: 280 -PPGKGCAFVQYAQRNSAEDALQRLHGTVIGQQAIRLSW 317
>gi|164656166|ref|XP_001729211.1| hypothetical protein MGL_3678 [Malassezia globosa CBS 7966]
gi|159103101|gb|EDP41997.1| hypothetical protein MGL_3678 [Malassezia globosa CBS 7966]
Length = 328
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 89/312 (28%), Positives = 139/312 (44%), Gaps = 51/312 (16%)
Query: 59 VYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIR------KDKSSYGFIHYFDRRSAAMAIL 112
+ V NI TE L+ +F GP+ G +++ + K +Y +I Y + SA MAI
Sbjct: 25 LLVRNISVHATERDLRVLFEQAGPIGGMEMMPPVLVQGQPKPTYAWIQYMRQASADMAIT 84
Query: 113 SLNGRHLFGQPIKVNWAYAS--------------------------GQREDTSGHFNIFV 146
L G L G P+ + WA + T+ +++FV
Sbjct: 85 YLQGFMLAGLPLFLEWAGSQDVGTQPIAMPVPVVMPSITPEARNMQALHTPTTCLYSVFV 144
Query: 147 GDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGK 206
GDL PE+ D L FS +PS DARV+ D + G SRG+GFV RN+++A AI +++G+
Sbjct: 145 GDLDPEIDDTILAQTFSGFPSMYDARVIRDLRNGHSRGYGFVRLRNEREAMEAIANMSGQ 204
Query: 207 WLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVY 266
W+GSR IR NWA + + + A+ ++ + SS+ T+Y
Sbjct: 205 WVGSRIIRVNWAVRPSEPFPSETQRPAEPEPKVADSSSDS----------------KTLY 248
Query: 267 VGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSS 326
VGNL D+ F S G + ++ R F ++S+ A A N
Sbjct: 249 VGNLPDNANLPDIMNIFSSFGNVINAQMFPGRHYAFVTFQFSSDANKAWDASQSNPPN-- 306
Query: 327 YLFGKQMKCSWG 338
+ G+ +K W
Sbjct: 307 -MAGQTLKVGWA 317
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 89/195 (45%), Gaps = 28/195 (14%)
Query: 26 QSLYHPGLLAAPQIEPIPSGNLPPGFDPSTC-RSVYVGNIHTQVTEPLLQEVFSSTGPVE 84
Q + P + P I P + N+ P+TC SV+VG++ ++ + +L + FS +
Sbjct: 109 QPIAMPVPVVMPSITP-EARNMQALHTPTTCLYSVFVGDLDPEIDDTILAQTFSGFPSMY 167
Query: 85 GCKLIRKDKSS----YGFIHYFDRRSAAMAILSLNGRHLFGQPIKVNWAY-------ASG 133
++IR ++ YGF+ + R A AI +++G+ + + I+VNWA +
Sbjct: 168 DARVIRDLRNGHSRGYGFVRLRNEREAMEAIANMSGQWVGSRIIRVNWAVRPSEPFPSET 227
Query: 134 QR---------EDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRG 184
QR + +S ++VG+L + FS + + +A++ R
Sbjct: 228 QRPAEPEPKVADSSSDSKTLYVGNLPDNANLPDIMNIFSSFGNVINAQMF------PGRH 281
Query: 185 FGFVSFRNQQDAQSA 199
+ FV+F+ DA A
Sbjct: 282 YAFVTFQFSSDANKA 296
>gi|212722984|ref|NP_001132004.1| uncharacterized protein LOC100193409 [Zea mays]
gi|194693170|gb|ACF80669.1| unknown [Zea mays]
Length = 422
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 93/296 (31%), Positives = 147/296 (49%), Gaps = 37/296 (12%)
Query: 57 RSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS----YGFIHYFDRRSAAMAIL 112
++++VG++H + E L F TG V K+IR ++ YGF+ ++ +A +
Sbjct: 92 KTIWVGDLHFWMDENYLHNCFGYTGEVVAIKVIRNKQTGQSEGYGFVEFYSHAAAERVLE 151
Query: 113 SLNGRHLF---GQPIKVNWAYAS--GQREDTSGHFNIFVGDLSPEVTDATLFACFSV-YP 166
+G H+ QP ++NWA S +R D + +IFVGDL+ +V DATL FS Y
Sbjct: 152 GFSG-HIMPNTDQPFRLNWASFSMGDRRSDVASDHSIFVGDLASDVNDATLLEVFSSRYS 210
Query: 167 SCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNE 226
S A+V+ D TGRS+G+GFV F + + A+ ++ G + SR +R AT
Sbjct: 211 SVKGAKVVIDANTGRSKGYGFVRFGDDSEKTHAMTEMNGVYCSSRPMRIGPATP------ 264
Query: 227 DKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSL 286
+ + + + DG + TN TTV+VG L P+V++ DL + F
Sbjct: 265 ---RKSSGTSGSNGSSARPDGGDLTN----------TTVFVGGLDPDVSEEDLRQAFSQY 311
Query: 287 GAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQ-MKCSWGSKP 341
G I V++ K GFV+++ A A+Q N + GKQ ++ SWG P
Sbjct: 312 GE--ISSVKIPVGKQCGFVQFAQRKNAEDALQGLNGS----TIGKQAVRLSWGRNP 361
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 87/184 (47%), Gaps = 24/184 (13%)
Query: 52 DPSTCRSVYVGNIHTQVTEPLLQEVFSST-GPVEGCKLIRKDKSS----YGFIHYFDRRS 106
D ++ S++VG++ + V + L EVFSS V+G K++ + YGF+ + D
Sbjct: 180 DVASDHSIFVGDLASDVNDATLLEVFSSRYSSVKGAKVVIDANTGRSKGYGFVRFGDDSE 239
Query: 107 AAMAILSLNGRHLFGQPIKVNWA-----------YASGQREDTSGHFN--IFVGDLSPEV 153
A+ +NG + +P+++ A S R D N +FVG L P+V
Sbjct: 240 KTHAMTEMNGVYCSSRPMRIGPATPRKSSGTSGSNGSSARPDGGDLTNTTVFVGGLDPDV 299
Query: 154 TDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQI 213
++ L FS Y S ++ ++ G FV F +++A+ A+ L G +G + +
Sbjct: 300 SEEDLRQAFSQYGEISSVKIPVGKQCG------FVQFAQRKNAEDALQGLNGSTIGKQAV 353
Query: 214 RCNW 217
R +W
Sbjct: 354 RLSW 357
>gi|356550321|ref|XP_003543536.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
isoform 1 [Glycine max]
Length = 419
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 94/298 (31%), Positives = 151/298 (50%), Gaps = 20/298 (6%)
Query: 56 CRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS----YGFIHYFDRRSAAMAI 111
R++++G++ V E L F TG V K+IR + YGF+ + +A +
Sbjct: 13 VRTLWIGDLQYWVDEGYLSHCFGHTGEVISIKIIRNKLTGQPEGYGFVEFVSHAAAERVL 72
Query: 112 LSLNGRHL--FGQPIKVNWA-YASGQRE-DTSGHFNIFVGDLSPEVTDATLFACFSV-YP 166
+ NG + Q ++NWA + G+R D + +IFVGDL+P+VTD L F YP
Sbjct: 73 QTYNGTQMPATDQTFRLNWASFGIGERRPDAAPEHSIFVGDLAPDVTDYLLQETFRAHYP 132
Query: 167 SCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT--KGAGN 224
S A+V+ D T RS+G+GFV F ++ + A+ ++ G + +R +R + AT K G
Sbjct: 133 SVRGAKVVTDPNTARSKGYGFVKFSDENERNRAMTEMNGVYCSTRPMRISAATPKKTTGA 192
Query: 225 NEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFH 284
+ K V + +S + P+ + TT++VGNL V++ +L + +
Sbjct: 193 YAAPAAPVPKPVYPVPAYTS----PVVQVQPPDYDVNNTTIFVGNLDLNVSEEELKQ--N 246
Query: 285 SLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSKPT 342
SL G I V++Q KGFGFV++ T A A AIQ Q + + ++ SWG T
Sbjct: 247 SLQFGEIVSVKIQPGKGFGFVQFGTRASAEEAIQ---KMQGKMIGQQVVRISWGRTLT 301
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 85/205 (41%), Gaps = 49/205 (23%)
Query: 52 DPSTCRSVYVGNIHTQVTEPLLQEVFSSTGP-VEGCKLIRKDKSS----YGFIHYFDRRS 106
D + S++VG++ VT+ LLQE F + P V G K++ ++ YGF+ + D
Sbjct: 102 DAAPEHSIFVGDLAPDVTDYLLQETFRAHYPSVRGAKVVTDPNTARSKGYGFVKFSDENE 161
Query: 107 AAMAILSLNGRHLFGQPIKVNWAYASGQREDTSGHF------------------------ 142
A+ +NG + +P+++ ++ + T+G +
Sbjct: 162 RNRAMTEMNGVYCSTRPMRI----SAATPKKTTGAYAAPAAPVPKPVYPVPAYTSPVVQV 217
Query: 143 ----------NIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRN 192
IFVG+L V++ L + ++ +GFGFV F
Sbjct: 218 QPPDYDVNNTTIFVGNLDLNVSEEELKQNSLQFGEIVSVKIQ------PGKGFGFVQFGT 271
Query: 193 QQDAQSAINDLTGKWLGSRQIRCNW 217
+ A+ AI + GK +G + +R +W
Sbjct: 272 RASAEEAIQKMQGKMIGQQVVRISW 296
Score = 43.1 bits (100), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 47/93 (50%), Gaps = 3/93 (3%)
Query: 48 PPGFDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSSYGFIHYFDRRSA 107
PP +D + +++VGN+ V+E L++ G + K+ + +GF+ + R SA
Sbjct: 219 PPDYDVNNT-TIFVGNLDLNVSEEELKQNSLQFGEIVSVKI--QPGKGFGFVQFGTRASA 275
Query: 108 AMAILSLNGRHLFGQPIKVNWAYASGQREDTSG 140
AI + G+ + Q ++++W R+D G
Sbjct: 276 EEAIQKMQGKMIGQQVVRISWGRTLTARQDLPG 308
>gi|294884880|gb|ADF47448.1| TIA1-like protein, partial [Dugesia japonica]
Length = 284
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 93/303 (30%), Positives = 146/303 (48%), Gaps = 35/303 (11%)
Query: 52 DPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRK---DKSSYGFIHYFDRRSAA 108
D R++YVGN+ +T+ LL +F + G GC +IR + Y FI Y + +A+
Sbjct: 2 DIRNNRTIYVGNLPDAITDHLLLRIFGNFGQCVGCHIIRDFSCQTNPYAFIEYTNHSAAS 61
Query: 109 MAILSLNGRHLFGQPIKVNWAYA-----------SGQREDTSGHFNIFVGDLSPEVTDAT 157
+A+ +++G ++ IKVNW+ S + D S IFVGD+ +V +A
Sbjct: 62 LALAAMDGIFMWNNQIKVNWSSGNSVNTVASSLPSSNKIDYSNTIQIFVGDIGLDVDEAM 121
Query: 158 LFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNW 217
L FS + DA+V+ Q G+SRGF FV+F + DA+ AI + W +R I+CNW
Sbjct: 122 LKEGFSEFGPVVDAKVVRYQD-GQSRGFAFVAFSKRDDAEKAIEKMHKTWFHNRTIKCNW 180
Query: 218 ATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQL 277
AT+ D ++ T E EAP N T VY+ + +T+
Sbjct: 181 ATRNG--------LDGDQFIKYT----PRPYELVYKEAPLTN---TNVYIAGIPEGLTEE 225
Query: 278 DLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSW 337
+ HF G I+ V+V +K F+ + TH AA AI + + + +KC+W
Sbjct: 226 LIRVHFEEFGR--IDAVKVYPEKAHAFINFVTHESAARAISQRHGYKIN---DNVIKCNW 280
Query: 338 GSK 340
G +
Sbjct: 281 GKE 283
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 80/196 (40%), Gaps = 29/196 (14%)
Query: 42 IPSGNLPPGFDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIR-KDKSSYG--F 98
+PS N D S ++VG+I V E +L+E FS GPV K++R +D S G F
Sbjct: 94 LPSSN---KIDYSNTIQIFVGDIGLDVDEAMLKEGFSEFGPVVDAKVVRYQDGQSRGFAF 150
Query: 99 IHYFDRRSAAMAILSLNGRHLFGQPIKVNWAYASGQREDTSGHF---------------- 142
+ + R A AI ++ + IK NWA +G D +
Sbjct: 151 VAFSKRDDAEKAIEKMHKTWFHNRTIKCNWATRNGLDGDQFIKYTPRPYELVYKEAPLTN 210
Query: 143 -NIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAIN 201
N+++ + +T+ + F + +V + F++F + A AI+
Sbjct: 211 TNVYIAGIPEGLTEELIRVHFEEFGRIDAVKVY------PEKAHAFINFVTHESAARAIS 264
Query: 202 DLTGKWLGSRQIRCNW 217
G + I+CNW
Sbjct: 265 QRHGYKINDNVIKCNW 280
>gi|356550323|ref|XP_003543537.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
isoform 2 [Glycine max]
Length = 410
Score = 131 bits (330), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 95/299 (31%), Positives = 152/299 (50%), Gaps = 22/299 (7%)
Query: 56 CRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS----YGFIHYFDRRSAAMAI 111
R++++G++ V E L F TG V K+IR + YGF+ + +A +
Sbjct: 13 VRTLWIGDLQYWVDEGYLSHCFGHTGEVISIKIIRNKLTGQPEGYGFVEFVSHAAAERVL 72
Query: 112 LSLNGRHL--FGQPIKVNWA-YASGQRE-DTSGHFNIFVGDLSPEVTDATLFACFSV-YP 166
+ NG + Q ++NWA + G+R D + +IFVGDL+P+VTD L F YP
Sbjct: 73 QTYNGTQMPATDQTFRLNWASFGIGERRPDAAPEHSIFVGDLAPDVTDYLLQETFRAHYP 132
Query: 167 SCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT--KGAGN 224
S A+V+ D T RS+G+GFV F ++ + A+ ++ G + +R +R + AT K G
Sbjct: 133 SVRGAKVVTDPNTARSKGYGFVKFSDENERNRAMTEMNGVYCSTRPMRISAATPKKTTGA 192
Query: 225 NEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFH 284
+ K V + +S + P+ + TT++VGNL V++ +L + +
Sbjct: 193 YAAPAAPVPKPVYPVPAYTS----PVVQVQPPDYDVNNTTIFVGNLDLNVSEEELKQ--N 246
Query: 285 SLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQ-MKCSWGSKPT 342
SL G I V++Q KGFGFV++ T A A AIQ + G+Q ++ SWG T
Sbjct: 247 SLQFGEIVSVKIQPGKGFGFVQFGTRASAEEAIQ----KMQGKMIGQQVVRISWGRTLT 301
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 85/205 (41%), Gaps = 49/205 (23%)
Query: 52 DPSTCRSVYVGNIHTQVTEPLLQEVFSSTGP-VEGCKLIRKDKSS----YGFIHYFDRRS 106
D + S++VG++ VT+ LLQE F + P V G K++ ++ YGF+ + D
Sbjct: 102 DAAPEHSIFVGDLAPDVTDYLLQETFRAHYPSVRGAKVVTDPNTARSKGYGFVKFSDENE 161
Query: 107 AAMAILSLNGRHLFGQPIKVNWAYASGQREDTSGHF------------------------ 142
A+ +NG + +P+++ ++ + T+G +
Sbjct: 162 RNRAMTEMNGVYCSTRPMRI----SAATPKKTTGAYAAPAAPVPKPVYPVPAYTSPVVQV 217
Query: 143 ----------NIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRN 192
IFVG+L V++ L + ++ +GFGFV F
Sbjct: 218 QPPDYDVNNTTIFVGNLDLNVSEEELKQNSLQFGEIVSVKIQ------PGKGFGFVQFGT 271
Query: 193 QQDAQSAINDLTGKWLGSRQIRCNW 217
+ A+ AI + GK +G + +R +W
Sbjct: 272 RASAEEAIQKMQGKMIGQQVVRISW 296
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 23/100 (23%), Positives = 49/100 (49%), Gaps = 3/100 (3%)
Query: 48 PPGFDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSSYGFIHYFDRRSA 107
PP +D + +++VGN+ V+E L++ G + K+ + +GF+ + R SA
Sbjct: 219 PPDYDVNNT-TIFVGNLDLNVSEEELKQNSLQFGEIVSVKI--QPGKGFGFVQFGTRASA 275
Query: 108 AMAILSLNGRHLFGQPIKVNWAYASGQREDTSGHFNIFVG 147
AI + G+ + Q ++++W R+ ++ + G
Sbjct: 276 EEAIQKMQGKMIGQQVVRISWGRTLTARQMDPNQWSAYYG 315
>gi|297792959|ref|XP_002864364.1| hypothetical protein ARALYDRAFT_495572 [Arabidopsis lyrata subsp.
lyrata]
gi|297310199|gb|EFH40623.1| hypothetical protein ARALYDRAFT_495572 [Arabidopsis lyrata subsp.
lyrata]
Length = 398
Score = 131 bits (330), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 90/299 (30%), Positives = 148/299 (49%), Gaps = 31/299 (10%)
Query: 54 STCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKD----KSSYGFIHYFDRRSAAM 109
S +S+++G++ + E + VF+ +G + K+IR YGFI + + A
Sbjct: 61 SEVKSLWIGDLQQWMDENYIMSVFNQSGEAQSAKVIRNKLTGQSEGYGFIEFINHSVAER 120
Query: 110 AILSLNGRHL--FGQPIKVNWAYASG--QREDTSG-HFNIFVGDLSPEVTDATLFACF-S 163
+ + NG + Q ++NWA A +R T G IFVGDL+PEVTD L F +
Sbjct: 121 VLQTYNGAQMPSTEQTFRLNWAQAGAGEKRHQTEGPDHTIFVGDLAPEVTDYMLSDTFKN 180
Query: 164 VYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAG 223
VY S A+V+ D+ TGRS+G+GFV F ++ + A+ ++ G++ +R +R A
Sbjct: 181 VYGSVKGAKVVVDRTTGRSKGYGFVRFADENEQMRAMTEMNGQYCSTRPMRIGPAAN--- 237
Query: 224 NNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHF 283
K+ + + ++ T A +++P TT++VG L VT +L F
Sbjct: 238 ----------KNALPMQPAMYQN---TQGGNAGDSDPNNTTIFVGGLDANVTDDELKSIF 284
Query: 284 HSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSKPT 342
G + V++ K GFV+Y+ A A A+ + N TQ L G+ ++ SWG P
Sbjct: 285 GQFGE--LLHVKIPPGKRCGFVQYANRATAEHALSVLNGTQ---LGGQSIRLSWGRSPN 338
Score = 46.6 bits (109), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 46/86 (53%), Gaps = 3/86 (3%)
Query: 52 DPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSSYGFIHYFDRRSAAMAI 111
DP+ +++VG + VT+ L+ +F G + K+ + GF+ Y +R +A A+
Sbjct: 260 DPNNT-TIFVGGLDANVTDDELKSIFGQFGELLHVKIPPGKRC--GFVQYANRATAEHAL 316
Query: 112 LSLNGRHLFGQPIKVNWAYASGQRED 137
LNG L GQ I+++W + ++ D
Sbjct: 317 SVLNGTQLGGQSIRLSWGRSPNKQPD 342
>gi|226480630|emb|CAX73412.1| TIA1 cytotoxic granule-associated RNA binding protein [Schistosoma
japonicum]
Length = 651
Score = 131 bits (329), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 78/210 (37%), Positives = 117/210 (55%), Gaps = 29/210 (13%)
Query: 136 EDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQD 195
ED S F+IFVGDL+PEV D TL A FS + + ++ +++ D T + +G+GFV++ +Q+
Sbjct: 153 EDDS--FHIFVGDLAPEVQDETLLAAFSNFGTITECKIIKDMHTQKPKGYGFVAYATRQE 210
Query: 196 AQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSSDAKSV--VELTNGSSEDGKETTNT 253
A+ AI + G+ +GSR IR NWA + + Q+ D + + +E+ N SS
Sbjct: 211 AERAIRIMNGQIIGSRAIRTNWAVRK---DPADQAKDHRPLNYLEVFNASSAAN------ 261
Query: 254 EAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEA 313
TT+YVG + E+T+ L F G I+E+R+ +DKGF FVR+ +H A
Sbjct: 262 ---------TTIYVGGITNELTEKLLQDSFKQFGE--IKEIRIFKDKGFSFVRFDSHVAA 310
Query: 314 ALAIQMGNTTQSSYLFGKQ-MKCSWGSKPT 342
AI T + G Q KCSWG +PT
Sbjct: 311 TQAI----VTMHGKIVGDQACKCSWGKEPT 336
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 86/188 (45%), Gaps = 26/188 (13%)
Query: 59 VYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIR----KDKSSYGFIHYFDRRSAAMAILSL 114
++VG++ +V + L FS+ G + CK+I+ + YGF+ Y R+ A AI +
Sbjct: 159 IFVGDLAPEVQDETLLAAFSNFGTITECKIIKDMHTQKPKGYGFVAYATRQEAERAIRIM 218
Query: 115 NGRHLFGQPIKVNWAYASGQREDTSGH--------FN--------IFVGDLSPEVTDATL 158
NG+ + + I+ NWA + H FN I+VG ++ E+T+ L
Sbjct: 219 NGQIIGSRAIRTNWAVRKDPADQAKDHRPLNYLEVFNASSAANTTIYVGGITNELTEKLL 278
Query: 159 FACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWA 218
F + + R+ D +GF FV F + A AI + GK +G + +C+W
Sbjct: 279 QDSFKQFGEIKEIRIFKD------KGFSFVRFDSHVAATQAIVTMHGKIVGDQACKCSWG 332
Query: 219 TKGAGNNE 226
+ N+
Sbjct: 333 KEPTFTNK 340
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 42/71 (59%), Gaps = 2/71 (2%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSSYGFIHYFDRRSAAMAILSLNGR 117
++YVG I ++TE LLQ+ F G ++ + I KDK + F+ + +A AI++++G+
Sbjct: 263 TIYVGGITNELTEKLLQDSFKQFGEIKEIR-IFKDK-GFSFVRFDSHVAATQAIVTMHGK 320
Query: 118 HLFGQPIKVNW 128
+ Q K +W
Sbjct: 321 IVGDQACKCSW 331
>gi|18423684|ref|NP_568815.1| RNA-binding protein 45A [Arabidopsis thaliana]
gi|75334165|sp|Q9FPJ8.1|RB45A_ARATH RecName: Full=Polyadenylate-binding protein RBP45A;
Short=Poly(A)-binding protein RBP45A; AltName:
Full=RNA-binding protein 45A; Short=AtRBP45A
gi|11762114|gb|AAG40335.1|AF324983_1 AT5g54900 [Arabidopsis thaliana]
gi|119360145|gb|ABL66801.1| At5g54900 [Arabidopsis thaliana]
gi|332009171|gb|AED96554.1| RNA-binding protein 45A [Arabidopsis thaliana]
Length = 387
Score = 131 bits (329), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 91/299 (30%), Positives = 146/299 (48%), Gaps = 31/299 (10%)
Query: 54 STCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKD----KSSYGFIHYFDRRSAAM 109
S +S+++G++ + E + VF+ +G K+IR YGFI + A
Sbjct: 57 SDVKSLWIGDLQQWMDENYIMSVFAQSGEATSAKVIRNKLTGQSEGYGFIEFVSHSVAER 116
Query: 110 AILSLNGRHL--FGQPIKVNWAYASG--QREDTSG-HFNIFVGDLSPEVTDATLFACF-S 163
+ + NG + Q ++NWA A +R T G IFVGDL+PEVTD L F +
Sbjct: 117 VLQTYNGAPMPSTEQTFRLNWAQAGAGEKRFQTEGPDHTIFVGDLAPEVTDYMLSDTFKN 176
Query: 164 VYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAG 223
VY S A+V+ D+ TGRS+G+GFV F ++ + A+ ++ G++ +R +R A
Sbjct: 177 VYGSVKGAKVVLDRTTGRSKGYGFVRFADENEQMRAMTEMNGQYCSTRPMRIGPAAN--- 233
Query: 224 NNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHF 283
K+ + + ++ T A +N+P TT++VG L VT +L F
Sbjct: 234 ----------KNALPMQPAMYQN---TQGANAGDNDPNNTTIFVGGLDANVTDDELKSIF 280
Query: 284 HSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSKPT 342
G + V++ K GFV+Y+ A A A+ + N TQ L G+ ++ SWG P
Sbjct: 281 GQFGE--LLHVKIPPGKRCGFVQYANKASAEHALSVLNGTQ---LGGQSIRLSWGRSPN 334
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 46/86 (53%), Gaps = 3/86 (3%)
Query: 52 DPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSSYGFIHYFDRRSAAMAI 111
DP+ +++VG + VT+ L+ +F G + K+ + GF+ Y ++ SA A+
Sbjct: 256 DPNNT-TIFVGGLDANVTDDELKSIFGQFGELLHVKIPPGKRC--GFVQYANKASAEHAL 312
Query: 112 LSLNGRHLFGQPIKVNWAYASGQRED 137
LNG L GQ I+++W + ++ D
Sbjct: 313 SVLNGTQLGGQSIRLSWGRSPNKQSD 338
>gi|356548971|ref|XP_003542872.1| PREDICTED: RNA-binding post-transcriptional regulator csx1-like
[Glycine max]
Length = 409
Score = 131 bits (329), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 95/305 (31%), Positives = 155/305 (50%), Gaps = 28/305 (9%)
Query: 56 CRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS----YGFIHYFDRRSAAMAI 111
R++++G++ + E L F+ TG V K+IR ++S YGFI + R A +
Sbjct: 65 VRTLWIGDLQYWMDENYLYTCFAHTGEVTSVKVIRNKQTSQSEGYGFIEFNSRAGAERIL 124
Query: 112 LSLNGRHL--FGQPIKVNWA-YASGQRE--DTSGHFNIFVGDLSPEVTDATLFACFSV-Y 165
+ NG + GQ ++NWA +++G+R D S + IFVGDL+ +VTD L F Y
Sbjct: 125 QTYNGAIMPNGGQSFRLNWATFSAGERSRHDDSPDYTIFVGDLAADVTDYLLQETFRARY 184
Query: 166 PSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNN 225
S A+V+ D+ TGR++G+GFV F ++ + A+ ++ G +R +R A N
Sbjct: 185 NSVKGAKVVIDRLTGRTKGYGFVRFSDESEQVRAMTEMQGVLCSTRPMRIG----PASNK 240
Query: 226 EDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHS 285
S K+ + S G + EN+P TT++VGNL P VT L + F
Sbjct: 241 TPTTQSQPKASYQ---NSQPQGSQN------ENDPNNTTIFVGNLDPNVTDDHLRQVFSQ 291
Query: 286 LGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSKPTPPG 345
G V V++ K GFV+++ + A A+++ N T L G+ ++ SWG P+
Sbjct: 292 YGELV--HVKIPAGKRCGFVQFADRSCAEEALRVLNGT---LLGGQNVRLSWGRSPSNKQ 346
Query: 346 TSSNP 350
++P
Sbjct: 347 AQADP 351
>gi|156358574|ref|XP_001624592.1| predicted protein [Nematostella vectensis]
gi|156211382|gb|EDO32492.1| predicted protein [Nematostella vectensis]
Length = 235
Score = 131 bits (329), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 82/251 (32%), Positives = 130/251 (51%), Gaps = 20/251 (7%)
Query: 60 YVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKD--KSSYGFIHYFDRRSAAMAILSLNGR 117
YVGN+ + T+ L+ +F+ V CK+I K Y F+ + A A ++ R
Sbjct: 1 YVGNLDPKCTQELICSIFNKIAKVVRCKMINSVSYKGPYCFVEFETHADAQEAKFRMDQR 60
Query: 118 HLFGQPIKVNWA--YASGQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMW 175
+ + +KVNWA + +R DT+ HF+IFVGDL+ V +A L F + S+ RV+
Sbjct: 61 TVMDKKLKVNWATNHPGMKRGDTNNHFHIFVGDLAENVDNALLRKTFEPFGEISEVRVVK 120
Query: 176 DQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSSDAKS 235
D +S+GFGFVSF ++DA AI ++ +G +Q++ NWA + K +
Sbjct: 121 DPAKNKSKGFGFVSFVRREDAAKAIAEMDSVTIGGKQVKTNWAAR-------KNNPTQSK 173
Query: 236 VVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVR 295
V + N +D +++ TTVYVGNL P+V +L + F G+ I E +
Sbjct: 174 YVCVKNLLWDD-------VFHQSSQLNTTVYVGNLPPDVKDYELQQMFSQYGS--ILETK 224
Query: 296 VQRDKGFGFVR 306
V DKG+ F++
Sbjct: 225 VFADKGYAFIK 235
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 87/210 (41%), Gaps = 45/210 (21%)
Query: 145 FVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLT 204
+VG+L P+ T + + F+ +++ + FV F DAQ A +
Sbjct: 1 YVGNLDPKCTQELICSIFNKIAKVVRCKMI--NSVSYKGPYCFVEFETHADAQEAKFRMD 58
Query: 205 GKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTT 264
+ + ++++ NWAT G + G + + +
Sbjct: 59 QRTVMDKKLKVNWATNHPG---------------MKRGDTNN---------------HFH 88
Query: 265 VYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRD------KGFGFVRYSTHAEAALAI- 317
++VG+LA V L + F G I EVRV +D KGFGFV + +AA AI
Sbjct: 89 IFVGDLAENVDNALLRKTFEPFGE--ISEVRVVKDPAKNKSKGFGFVSFVRREDAAKAIA 146
Query: 318 QMGNTTQSSYLFGKQMKCSWGSKPTPPGTS 347
+M + T + GKQ+K +W ++ P S
Sbjct: 147 EMDSVT----IGGKQVKTNWAARKNNPTQS 172
>gi|9758270|dbj|BAB08769.1| unnamed protein product [Arabidopsis thaliana]
Length = 390
Score = 130 bits (328), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 91/299 (30%), Positives = 146/299 (48%), Gaps = 31/299 (10%)
Query: 54 STCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKD----KSSYGFIHYFDRRSAAM 109
S +S+++G++ + E + VF+ +G K+IR YGFI + A
Sbjct: 57 SDVKSLWIGDLQQWMDENYIMSVFAQSGEATSAKVIRNKLTGQSEGYGFIEFVSHSVAER 116
Query: 110 AILSLNGRHL--FGQPIKVNWAYASG--QREDTSG-HFNIFVGDLSPEVTDATLFACF-S 163
+ + NG + Q ++NWA A +R T G IFVGDL+PEVTD L F +
Sbjct: 117 VLQTYNGAPMPSTEQTFRLNWAQAGAGEKRFQTEGPDHTIFVGDLAPEVTDYMLSDTFKN 176
Query: 164 VYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAG 223
VY S A+V+ D+ TGRS+G+GFV F ++ + A+ ++ G++ +R +R A
Sbjct: 177 VYGSVKGAKVVLDRTTGRSKGYGFVRFADENEQMRAMTEMNGQYCSTRPMRIGPAAN--- 233
Query: 224 NNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHF 283
K+ + + ++ T A +N+P TT++VG L VT +L F
Sbjct: 234 ----------KNALPMQPAMYQN---TQGANAGDNDPNNTTIFVGGLDANVTDDELKSIF 280
Query: 284 HSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSKPT 342
G + V++ K GFV+Y+ A A A+ + N TQ L G+ ++ SWG P
Sbjct: 281 GQFGE--LLHVKIPPGKRCGFVQYANKASAEHALSVLNGTQ---LGGQSIRLSWGRSPN 334
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 46/86 (53%), Gaps = 3/86 (3%)
Query: 52 DPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSSYGFIHYFDRRSAAMAI 111
DP+ +++VG + VT+ L+ +F G + K+ + GF+ Y ++ SA A+
Sbjct: 256 DPNNT-TIFVGGLDANVTDDELKSIFGQFGELLHVKIPPGKRC--GFVQYANKASAEHAL 312
Query: 112 LSLNGRHLFGQPIKVNWAYASGQRED 137
LNG L GQ I+++W + ++ D
Sbjct: 313 SVLNGTQLGGQSIRLSWGRSPNKQSD 338
>gi|82621116|gb|ABB86246.1| DNA-binding protein-like [Solanum tuberosum]
Length = 423
Score = 130 bits (328), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 95/301 (31%), Positives = 156/301 (51%), Gaps = 31/301 (10%)
Query: 57 RSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS----YGFIHYFDRRSAAMAIL 112
R++++G++ + E L F+ G V K+IR ++ YGFI + +A +
Sbjct: 79 RTIWIGDLQQWMDEGYLHTCFAQAGEVISVKVIRNKQTGQSERYGFIEFNTHEAAEKVLQ 138
Query: 113 SLNGRHL--FGQPIKVNW-AYASGQREDTSG-------HFNIFVGDLSPEVTDATLFACF 162
S NG + QP ++NW A+++G++ G +IFVGDL+ +VTD L F
Sbjct: 139 SYNGTMMPNAEQPFRLNWSAFSTGEKRADVGAAAGSGSDLSIFVGDLASDVTDTMLRDTF 198
Query: 163 SV-YPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKG 221
S YPS A+V+ D TGRS+G+GFV F ++ + A+ ++ G + SR +R AT
Sbjct: 199 SSRYPSVKGAKVVIDSNTGRSKGYGFVRFDDESERSRAMTEMNGIYCSSRAMRIGVATPK 258
Query: 222 AGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHR 281
+ + SS +NG++ +T+ T++ +N TTV+VG L +VT +L +
Sbjct: 259 KPSAMQQYSSQGG---HASNGAA---TQTSQTDSDLSN---TTVFVGGLDSDVTDEELRQ 309
Query: 282 HFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQ-MKCSWGSK 340
F G + V++ KG GFV++S + A AI+ N T + G Q ++ SWG
Sbjct: 310 SFSQFGN--VVSVKIPAGKGCGFVQFSERSAAEDAIEKLNGT----VIGTQTVRLSWGRN 363
Query: 341 P 341
P
Sbjct: 364 P 364
>gi|297844004|ref|XP_002889883.1| ATRBP45B [Arabidopsis lyrata subsp. lyrata]
gi|297335725|gb|EFH66142.1| ATRBP45B [Arabidopsis lyrata subsp. lyrata]
Length = 408
Score = 130 bits (328), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 96/314 (30%), Positives = 148/314 (47%), Gaps = 37/314 (11%)
Query: 43 PSGNLPPGFDPSTC---RSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS---- 95
P PP P T R++++G++ + E L F+ TG + K+IR ++
Sbjct: 47 PQAAAPPSAQPMTVDEIRTLWIGDLQYWMDENFLYGCFAHTGEMVSAKVIRNKQTGQVEG 106
Query: 96 YGFIHYFDRRSAAMAILSLNGRHLFGQP---IKVNWA-YASGQREDTSGHFNIFVGDLSP 151
YGFI + +A + + N + P ++NWA +SG + D S + IFVGDL+
Sbjct: 107 YGFIEFASHAAAERVLQTFNNAPIPSFPDQLFRLNWASLSSGDKRDDSPDYTIFVGDLAA 166
Query: 152 EVTDATLFACF-SVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGS 210
+VTD L F + YPS A+V+ D+ TGR++G+GFV F ++ + A+ ++ G +
Sbjct: 167 DVTDYILLETFRASYPSVKGAKVVIDRATGRTKGYGFVRFSDESEQIRAMTEMNGVPCST 226
Query: 211 RQIRCNWAT--KGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVG 268
R +R A KG D S A V +N+P TTV+VG
Sbjct: 227 RPMRIGPAASKKGVTGQRDSYQSAAGGVPT------------------DNDPNNTTVFVG 268
Query: 269 NLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYL 328
L VT L F G I V++ K GFV++S + A A++M N Q L
Sbjct: 269 GLDQSVTDDHLKNVFGQYGE--IVHVKIPAGKRCGFVQFSEKSCAEEALRMLNGVQ---L 323
Query: 329 FGKQMKCSWGSKPT 342
G ++ SWG P+
Sbjct: 324 GGTTVRLSWGRSPS 337
Score = 42.7 bits (99), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 47/93 (50%), Gaps = 3/93 (3%)
Query: 44 SGNLPPGFDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSSYGFIHYFD 103
+G +P DP+ +V+VG + VT+ L+ VF G + K+ + GF+ + +
Sbjct: 251 AGGVPTDNDPNNT-TVFVGGLDQSVTDDHLKNVFGQYGEIVHVKIPAGKRC--GFVQFSE 307
Query: 104 RRSAAMAILSLNGRHLFGQPIKVNWAYASGQRE 136
+ A A+ LNG L G ++++W + ++
Sbjct: 308 KSCAEEALRMLNGVQLGGTTVRLSWGRSPSNKQ 340
>gi|222629596|gb|EEE61728.1| hypothetical protein OsJ_16246 [Oryza sativa Japonica Group]
Length = 607
Score = 130 bits (328), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 91/291 (31%), Positives = 149/291 (51%), Gaps = 35/291 (12%)
Query: 57 RSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS----YGFIHYFDRRSAAMAIL 112
+++++G++ + E + F++TG V+ KLIR +S YGF+ + R +A +
Sbjct: 39 KTLWIGDLQPWMDESYIYNCFAATGEVQSVKLIRDKQSGQLQGYGFVEFTSRAAADRILQ 98
Query: 113 SLNGRHL--FGQPIKVNWAYASGQREDTSGHFNIFVGDLSPEVTDATLFACFSV-YPSCS 169
+ NG+ + ++NWA A +R+DT + IFVGDL+ +VTD L F V YPS
Sbjct: 99 TYNGQMMPNVEMVFRLNWASAGEKRDDTP-DYTIFVGDLAADVTDYLLQETFRVHYPSVK 157
Query: 170 DARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQ 229
A+V+ D+ T RS+G+GFV F + + A+ ++ G SR +R G +K+
Sbjct: 158 GAKVVTDKMTMRSKGYGFVKFGDPTEQARAMTEMNGMLCSSRPMRI-------GPAANKK 210
Query: 230 SSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAG 289
++ + V G+ EN+P TT++VG L P VT+ L + F G
Sbjct: 211 TTGVQERVPNAQGAQS-----------ENDPNNTTIFVGGLDPNVTEDVLKQVFAPYGEV 259
Query: 290 VIEEVRVQRDKGFGFVRYSTH--AEAALAIQMGNTTQSSYLFGKQMKCSWG 338
V V++ K GFV+Y AE ALA+ Q + + G+ ++ SWG
Sbjct: 260 V--HVKIPVGKRCGFVQYVNRPSAEQALAV-----LQGTLIGGQNVRLSWG 303
Score = 46.2 bits (108), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 44/77 (57%), Gaps = 3/77 (3%)
Query: 52 DPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSSYGFIHYFDRRSAAMAI 111
DP+ +++VG + VTE +L++VF+ G V K+ + GF+ Y +R SA A+
Sbjct: 229 DPNNT-TIFVGGLDPNVTEDVLKQVFAPYGEVVHVKIPVGKRC--GFVQYVNRPSAEQAL 285
Query: 112 LSLNGRHLFGQPIKVNW 128
L G + GQ ++++W
Sbjct: 286 AVLQGTLIGGQNVRLSW 302
>gi|356563290|ref|XP_003549897.1| PREDICTED: RNA-binding post-transcriptional regulator csx1-like
[Glycine max]
Length = 402
Score = 130 bits (328), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 98/319 (30%), Positives = 162/319 (50%), Gaps = 34/319 (10%)
Query: 36 APQIEPIPSGNLPPGFDPSTC---RSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKD 92
AP +P PP P++ R++++G++ + E L F+ TG + K+IR
Sbjct: 43 APSAQPPSQSVAPP--QPTSADEVRTLWIGDLQYWMDENYLYTCFAHTGELASVKVIRNK 100
Query: 93 KSS----YGFIHYFDRRSAAMAILSLNGRHL--FGQPIKVNWA-YASGQRE-DTSGHFNI 144
++S YGFI + R A + + NG + GQ ++NWA +++G+R D S I
Sbjct: 101 QTSQSEGYGFIEFTSRAGAERVLQTYNGTIMPNGGQNFRLNWATFSAGERRHDDSPDHTI 160
Query: 145 FVGDLSPEVTDATLFACFSV-YPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDL 203
FVGDL+ +VTD L F YPS A+V+ D+ TGR++G+GFV F ++ + A++++
Sbjct: 161 FVGDLAADVTDYLLQETFRARYPSAKGAKVVIDRLTGRTKGYGFVRFGDESEQVRAMSEM 220
Query: 204 TGKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYT 263
G +R +R A+ N S K+ + G+ E++P T
Sbjct: 221 QGVLCSTRPMRIGPAS----NKNPSTQSQPKASYQNPQGAQN-----------EHDPNNT 265
Query: 264 TVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTT 323
T++VGNL P VT L + F G V V++ K GFV+++ + A A+++ N T
Sbjct: 266 TIFVGNLDPNVTDDHLRQVFGQYGELV--HVKIPAGKRCGFVQFADRSCAEEALRVLNGT 323
Query: 324 QSSYLFGKQMKCSWGSKPT 342
L G+ ++ SWG P+
Sbjct: 324 ---LLGGQNVRLSWGRSPS 339
>gi|195391718|ref|XP_002054507.1| GJ22768 [Drosophila virilis]
gi|194152593|gb|EDW68027.1| GJ22768 [Drosophila virilis]
Length = 504
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 87/227 (38%), Positives = 121/227 (53%), Gaps = 29/227 (12%)
Query: 141 HFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAI 200
F+IFVGDLS E+ L F+ + SD RV+ D +T +S+G+GFVSF + +A+SAI
Sbjct: 170 QFHIFVGDLSSEIETQQLREAFTPFGEISDCRVVRDPQTLKSKGYGFVSFIKKSEAESAI 229
Query: 201 NDLTGKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNP 260
+ G+WLGSR IR NWAT+ K + +++ LT E N +P N
Sbjct: 230 TAMNGQWLGSRSIRTNWATR-------KPPASKENIKPLTF------DEVYNQSSPSN-- 274
Query: 261 QYTTVYVGNLAPEVTQLD---LHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAI 317
TVYVG + +T L L + F GA I+E+RV +DKG+ FVR+ST A AI
Sbjct: 275 --CTVYVGGVNSALTALSEEVLQKTFAPYGA--IQEIRVFKDKGYAFVRFSTKEAATHAI 330
Query: 318 QMGNTTQSSYLFGKQMKCSWGSKPTPPGTS----SNPLPPPAAAPIP 360
+ T+ + + +KCSWG + P S S L AAA P
Sbjct: 331 VGVHNTE---INAQPVKCSWGKESGDPNNSQSMASQALNSAAAAGFP 374
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/198 (22%), Positives = 93/198 (46%), Gaps = 29/198 (14%)
Query: 59 VYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKS----SYGFIHYFDRRSAAMAILSL 114
++VG++ +++ L+E F+ G + C+++R ++ YGF+ + + A AI ++
Sbjct: 173 IFVGDLSSEIETQQLREAFTPFGEISDCRVVRDPQTLKSKGYGFVSFIKKSEAESAITAM 232
Query: 115 NGRHLFGQPIKVNWA---------------YASGQREDTSGHFNIFVGDLSPEVT---DA 156
NG+ L + I+ NWA + + + + ++VG ++ +T +
Sbjct: 233 NGQWLGSRSIRTNWATRKPPASKENIKPLTFDEVYNQSSPSNCTVYVGGVNSALTALSEE 292
Query: 157 TLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCN 216
L F+ Y + + RV D +G+ FV F ++ A AI + + ++ ++C+
Sbjct: 293 VLQKTFAPYGAIQEIRVFKD------KGYAFVRFSTKEAATHAIVGVHNTEINAQPVKCS 346
Query: 217 WATK-GAGNNEDKQSSDA 233
W + G NN +S A
Sbjct: 347 WGKESGDPNNSQSMASQA 364
>gi|432115353|gb|ELK36770.1| Nucleolysin TIAR [Myotis davidii]
Length = 284
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 87/246 (35%), Positives = 128/246 (52%), Gaps = 47/246 (19%)
Query: 96 YGFIHYFDRRSAAMAILSLNGRHLFGQPIKVNWAYA-SGQREDTSGHFNIFVGDLSPEVT 154
Y F+ +++ R AA A+ ++NGR + G+ +KVNWA S Q++DTS
Sbjct: 28 YCFVEFYEHRDAAAALAAMNGRKILGKEVKVNWATTPSSQKKDTS--------------- 72
Query: 155 DATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIR 214
DARV+ D TG+S+G+GFVSF N+ DA++AI + G+WLG RQIR
Sbjct: 73 -------------SKDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIR 119
Query: 215 CNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEV 274
NWAT+ + Q ++ K + ++ N +P+N TVY G +A +
Sbjct: 120 TNWATRKPPAPKSTQENNTKQL---------RFEDVVNQSSPKN----CTVYCGGIASGL 166
Query: 275 TQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMK 334
T + + F G I E+RV +KG+ FVR+STH AA AI N T + G +K
Sbjct: 167 TDQLMRQTFSPFGQ--IMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTT---IEGHVVK 221
Query: 335 CSWGSK 340
C WG +
Sbjct: 222 CYWGKE 227
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 76/184 (41%), Gaps = 26/184 (14%)
Query: 69 TEPLLQEVFSSTGPVEGCKLIRKDKSS-YGFIHYFDRRSAAMAILSLNGRHLFGQPIKVN 127
T P Q+ +S+ K + KS YGF+ ++++ A AI+ + G+ L G+ I+ N
Sbjct: 62 TTPSSQKKDTSSKDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTN 121
Query: 128 WAY------ASGQREDTS-------------GHFNIFVGDLSPEVTDATLFACFSVYPSC 168
WA S Q +T + ++ G ++ +TD + FS +
Sbjct: 122 WATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQTFSPFGQI 181
Query: 169 SDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDK 228
+ RV +G+ FV F + A AI + G + ++C W + ++
Sbjct: 182 MEIRVF------PEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGKESPDMTKNF 235
Query: 229 QSSD 232
Q D
Sbjct: 236 QQVD 239
>gi|357158812|ref|XP_003578248.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
[Brachypodium distachyon]
Length = 431
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 96/297 (32%), Positives = 147/297 (49%), Gaps = 40/297 (13%)
Query: 57 RSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS----YGFIHYFDRRSAAMAIL 112
++++VG++H + E L F TG V K+IR ++ YGF+ ++ +AA +L
Sbjct: 104 KTIWVGDLHYWMDENYLHSCFGYTGEVVAIKVIRNKQTGQSEGYGFVEFYSH-AAAEKVL 162
Query: 113 SLNGRHLF---GQPIKVNWAYAS--GQREDTSGHFNIFVGDLSPEVTDATLFACFSV-YP 166
H+ QP ++NWA S +R D + +IFVGDL+ +V DATL FS Y
Sbjct: 163 DGFAGHIMPNTDQPFRINWASFSMGDRRSDIASDHSIFVGDLASDVNDATLLEIFSSRYS 222
Query: 167 SCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT-KGAGNN 225
S A+V+ D TGRS+G+GFV F + + A+ ++ G + +R +R AT + + N
Sbjct: 223 SVKGAKVVIDANTGRSKGYGFVRFGDDSEKTHAMTEMNGVYCSTRPMRIGPATPRKSSGN 282
Query: 226 EDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHS 285
S A+S +LTN TTV+VG L P V++ DL + F
Sbjct: 283 SGSTGSSARSDGDLTN---------------------TTVFVGGLDPNVSEDDLRQSFSQ 321
Query: 286 LGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQ-MKCSWGSKP 341
G I V++ K GFV++ A A+Q N + GKQ ++ SWG P
Sbjct: 322 YGE--ISSVKIPVGKQCGFVQFLQRKNAEDALQGLNGS----TIGKQTVRLSWGRNP 372
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 87/187 (46%), Gaps = 31/187 (16%)
Query: 52 DPSTCRSVYVGNIHTQVTEPLLQEVFSST-GPVEGCKLIRKDKSS----YGFIHYFDRRS 106
D ++ S++VG++ + V + L E+FSS V+G K++ + YGF+ + D
Sbjct: 192 DIASDHSIFVGDLASDVNDATLLEIFSSRYSSVKGAKVVIDANTGRSKGYGFVRFGDDSE 251
Query: 107 AAMAILSLNGRHLFGQPIKVN----------------WAYASGQREDTSGHFNIFVGDLS 150
A+ +NG + +P+++ A + G +T+ +FVG L
Sbjct: 252 KTHAMTEMNGVYCSTRPMRIGPATPRKSSGNSGSTGSSARSDGDLTNTT----VFVGGLD 307
Query: 151 PEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGS 210
P V++ L FS Y S ++ ++ G FV F +++A+ A+ L G +G
Sbjct: 308 PNVSEDDLRQSFSQYGEISSVKIPVGKQCG------FVQFLQRKNAEDALQGLNGSTIGK 361
Query: 211 RQIRCNW 217
+ +R +W
Sbjct: 362 QTVRLSW 368
>gi|223948225|gb|ACN28196.1| unknown [Zea mays]
gi|414590425|tpg|DAA40996.1| TPA: hypothetical protein ZEAMMB73_114709 [Zea mays]
Length = 503
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 92/296 (31%), Positives = 156/296 (52%), Gaps = 32/296 (10%)
Query: 56 CRSVYVGNIHTQVTEPLLQEVFSSTGPVE----GCKLIRKDKSS----YGFIHYFDRRSA 107
R++++G++ + E L +++ PV K+IR ++ YGFI ++ + +A
Sbjct: 145 VRTLWIGDLQYWMDENYLH--YNAFAPVAQQIASVKIIRNKQTGHSEGYGFIEFYSQAAA 202
Query: 108 AMAILSLNGRHL--FGQPIKVNWAYAS--GQREDTSGHFNIFVGDLSPEVTDATLFACFS 163
+++ NG+ + K+NWA AS +R D IFVGDL+P+VTD+ L F
Sbjct: 203 EHTLMNFNGQMMPNIEMAFKLNWASASTGDKRGDNGSDHAIFVGDLAPDVTDSMLEDVFR 262
Query: 164 V-YPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGA 222
YPS A+V+ D+ TGR +G+GFV F + + A+ ++ G L +R++R A
Sbjct: 263 ANYPSVRGAKVVVDRITGRPKGYGFVHFGDLNEQARAMTEMNGMMLSTRKMRIGAAAS-- 320
Query: 223 GNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRH 282
K+++DA+ TNG+ +++ EN+P TTV+VG L V + L +
Sbjct: 321 -----KKNTDAQQTY-ATNGA----YQSSQGNCSENDPNNTTVFVGGLDSNVDEEYLRQI 370
Query: 283 FHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWG 338
F G I V++ K GFV++++ + A AIQM N +Q + G++ + SWG
Sbjct: 371 FTPYGE--ISYVKIPVGKHCGFVQFTSRSCAEEAIQMLNGSQ---IGGQKARLSWG 421
Score = 44.7 bits (104), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 44/85 (51%), Gaps = 3/85 (3%)
Query: 52 DPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSSYGFIHYFDRRSAAMAI 111
DP+ +V+VG + + V E L+++F+ G + K+ GF+ + R A AI
Sbjct: 347 DPNNT-TVFVGGLDSNVDEEYLRQIFTPYGEISYVKIPVGKHC--GFVQFTSRSCAEEAI 403
Query: 112 LSLNGRHLFGQPIKVNWAYASGQRE 136
LNG + GQ +++W ++ R+
Sbjct: 404 QMLNGSQIGGQKARLSWGRSTQNRQ 428
>gi|212276053|ref|NP_001130512.1| uncharacterized protein LOC100191611 [Zea mays]
gi|194689348|gb|ACF78758.1| unknown [Zea mays]
gi|414590424|tpg|DAA40995.1| TPA: hypothetical protein ZEAMMB73_114709 [Zea mays]
Length = 472
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 92/296 (31%), Positives = 156/296 (52%), Gaps = 32/296 (10%)
Query: 56 CRSVYVGNIHTQVTEPLLQEVFSSTGPVE----GCKLIRKDKSS----YGFIHYFDRRSA 107
R++++G++ + E L +++ PV K+IR ++ YGFI ++ + +A
Sbjct: 114 VRTLWIGDLQYWMDENYLH--YNAFAPVAQQIASVKIIRNKQTGHSEGYGFIEFYSQAAA 171
Query: 108 AMAILSLNGRHL--FGQPIKVNWAYAS--GQREDTSGHFNIFVGDLSPEVTDATLFACFS 163
+++ NG+ + K+NWA AS +R D IFVGDL+P+VTD+ L F
Sbjct: 172 EHTLMNFNGQMMPNIEMAFKLNWASASTGDKRGDNGSDHAIFVGDLAPDVTDSMLEDVFR 231
Query: 164 V-YPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGA 222
YPS A+V+ D+ TGR +G+GFV F + + A+ ++ G L +R++R A
Sbjct: 232 ANYPSVRGAKVVVDRITGRPKGYGFVHFGDLNEQARAMTEMNGMMLSTRKMRIGAAAS-- 289
Query: 223 GNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRH 282
K+++DA+ TNG+ +++ EN+P TTV+VG L V + L +
Sbjct: 290 -----KKNTDAQQTY-ATNGA----YQSSQGNCSENDPNNTTVFVGGLDSNVDEEYLRQI 339
Query: 283 FHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWG 338
F G I V++ K GFV++++ + A AIQM N +Q + G++ + SWG
Sbjct: 340 FTPYGE--ISYVKIPVGKHCGFVQFTSRSCAEEAIQMLNGSQ---IGGQKARLSWG 390
Score = 44.7 bits (104), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 44/85 (51%), Gaps = 3/85 (3%)
Query: 52 DPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSSYGFIHYFDRRSAAMAI 111
DP+ +V+VG + + V E L+++F+ G + K+ GF+ + R A AI
Sbjct: 316 DPNNT-TVFVGGLDSNVDEEYLRQIFTPYGEISYVKIPVGKHC--GFVQFTSRSCAEEAI 372
Query: 112 LSLNGRHLFGQPIKVNWAYASGQRE 136
LNG + GQ +++W ++ R+
Sbjct: 373 QMLNGSQIGGQKARLSWGRSTQNRQ 397
>gi|449523756|ref|XP_004168889.1| PREDICTED: polyadenylate-binding protein RBP47-like [Cucumis
sativus]
Length = 437
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 93/295 (31%), Positives = 152/295 (51%), Gaps = 24/295 (8%)
Query: 56 CRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS----YGFIHYFDRRSAAMAI 111
+++++G++ + E L F+ TG V K+I ++ YGF+ +F +A +
Sbjct: 99 VKTLWIGDLQPWMDETYLNNCFAHTGEVSSVKVICNKQTGQSEGYGFVEFFSHTTAEKVL 158
Query: 112 LSLNGRHLFGQ--PIKVNWAY--ASGQREDTSGHFNIFVGDLSPEVTDATLFACFSV-YP 166
+ NG + P ++NWA A+ +R DT +IFVGDL+ +VTDA L FS Y
Sbjct: 159 QNYNGTIMPNTELPFRLNWATFSANDRRPDTGSDLSIFVGDLAADVTDAILQETFSSRYT 218
Query: 167 SCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT--KGAGN 224
S A+V+ D +GRS+G+GFV F ++ + A+ ++ G + SR +R AT K +G
Sbjct: 219 SVKGAKVVIDSNSGRSKGYGFVRFGDENERTRAMTEMNGIYCSSRPMRIGVATPKKASGY 278
Query: 225 NEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFH 284
+ S NG + G + +++ NN TT++VG L +V+ DL + F
Sbjct: 279 QQGYASQALVLAGGHPNGMAVQGSQ---SDSESNN---TTIFVGGLDSDVSDEDLKQAFS 332
Query: 285 SLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQ-MKCSWG 338
G + V++ KG GFV+++ A AIQ N T + GKQ ++ SWG
Sbjct: 333 KFGD--VVSVKIPIGKGCGFVQFANRKNAEDAIQGLNGT----VIGKQTVRLSWG 381
Score = 45.1 bits (105), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 53/94 (56%), Gaps = 7/94 (7%)
Query: 54 STCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKL-IRKDKSSYGFIHYFDRRSAAMAIL 112
S +++VG + + V++ L++ FS G V K+ I K GF+ + +R++A AI
Sbjct: 308 SNNTTIFVGGLDSDVSDEDLKQAFSKFGDVVSVKIPIGK---GCGFVQFANRKNAEDAIQ 364
Query: 113 SLNGRHLFGQPIKVNWAYASGQRE---DTSGHFN 143
LNG + Q ++++W ++G ++ D++ +N
Sbjct: 365 GLNGTVIGKQTVRLSWGRSTGNKQWRGDSNNQWN 398
>gi|296412343|ref|XP_002835884.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295629680|emb|CAZ80041.1| unnamed protein product [Tuber melanosporum]
Length = 412
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 92/291 (31%), Positives = 148/291 (50%), Gaps = 40/291 (13%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS----YGFIHYFDRRSAAMAILS 113
++++G + + E ++ V+ G K+IR DK S Y F+ F +AA L+
Sbjct: 45 TLWMGELEPWIDEAFVRNVWYQLGEGVNVKMIR-DKFSGNAGYCFVD-FSSPAAAAKALT 102
Query: 114 LNGRHLFG--QPIKVNWAYASG---QREDTSGHFNIFVGDLSPEVTDATLFACF-SVYPS 167
LN + G +P K+NWA G +R+D ++IFVGDL PEV + L + F S +PS
Sbjct: 103 LNATPIPGSSRPFKLNWASGGGLADRRDDRGPEYSIFVGDLGPEVNEYVLVSLFQSRFPS 162
Query: 168 CSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNED 227
C A++M D +G SRG+GFV F ++ D Q A+ ++ G + G+R +R + AT ++
Sbjct: 163 CKSAKIMTDPVSGMSRGYGFVRFSDEMDQQRALTEMQGVYCGNRPMRISTATP-----KN 217
Query: 228 KQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLG 287
K ++ + + T +P TTV+VG L+ VT+ +L F G
Sbjct: 218 KSATGGPPMNQFT------------------DPNNTTVFVGGLSGYVTEDELRSFFQ--G 257
Query: 288 AGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWG 338
G I V++ KG GFV++ A +AI N Q + +++ SWG
Sbjct: 258 FGEITYVKIPPGKGCGFVQFVQRHAAEMAI---NQMQGYPIGNSRVRLSWG 305
>gi|256086132|ref|XP_002579259.1| nucleolysin tia-1 [Schistosoma mansoni]
gi|353232225|emb|CCD79580.1| putative nucleolysin tia-1 [Schistosoma mansoni]
Length = 547
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 75/204 (36%), Positives = 117/204 (57%), Gaps = 27/204 (13%)
Query: 142 FNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAIN 201
F+IFVGDL+PEV D TL A FS + + ++ +++ D T + +G+GFV++ +Q+A+ AI
Sbjct: 33 FHIFVGDLAPEVQDETLLAAFSNFGTITECKIIKDMHTQKPKGYGFVAYATRQEAERAIR 92
Query: 202 DLTGKWLGSRQIRCNWATKGAGNNEDKQSSDAKSV--VELTNGSSEDGKETTNTEAPENN 259
+ G+ +G+R IR NWA + + Q+ D + + +E+ N SS +TN
Sbjct: 93 IMNGQIIGTRAIRTNWAVRK---DPADQAKDHRPLNYLEVFNASS-----STN------- 137
Query: 260 PQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQM 319
TT+YVG + E+T+ L F G I+E+R+ +DKGF F+R+ +H A AI
Sbjct: 138 ---TTIYVGGITNELTEKLLQDSFKQFGE--IKEIRIFKDKGFSFIRFDSHVAATQAI-- 190
Query: 320 GNTTQSSYLFGKQ-MKCSWGSKPT 342
T + G Q KCSWG +PT
Sbjct: 191 --VTMHGKIVGDQACKCSWGKEPT 212
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 96/211 (45%), Gaps = 29/211 (13%)
Query: 59 VYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIR----KDKSSYGFIHYFDRRSAAMAILSL 114
++VG++ +V + L FS+ G + CK+I+ + YGF+ Y R+ A AI +
Sbjct: 35 IFVGDLAPEVQDETLLAAFSNFGTITECKIIKDMHTQKPKGYGFVAYATRQEAERAIRIM 94
Query: 115 NGRHLFGQPIKVNWAYASGQREDTSGH--------FN--------IFVGDLSPEVTDATL 158
NG+ + + I+ NWA + H FN I+VG ++ E+T+ L
Sbjct: 95 NGQIIGTRAIRTNWAVRKDPADQAKDHRPLNYLEVFNASSSTNTTIYVGGITNELTEKLL 154
Query: 159 FACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWA 218
F + + R+ D +GF F+ F + A AI + GK +G + +C+W
Sbjct: 155 QDSFKQFGEIKEIRIFKD------KGFSFIRFDSHVAATQAIVTMHGKIVGDQACKCSWG 208
Query: 219 TKGAGNNED---KQSSDAKSVVELTNGSSED 246
+ N+ K+ S A V L + ++D
Sbjct: 209 KEPTFTNKQGLAKRLSSAMFVPTLNHNMNDD 239
Score = 46.6 bits (109), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 44/75 (58%), Gaps = 2/75 (2%)
Query: 54 STCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSSYGFIHYFDRRSAAMAILS 113
ST ++YVG I ++TE LLQ+ F G ++ + I KDK + FI + +A AI++
Sbjct: 135 STNTTIYVGGITNELTEKLLQDSFKQFGEIKEIR-IFKDK-GFSFIRFDSHVAATQAIVT 192
Query: 114 LNGRHLFGQPIKVNW 128
++G+ + Q K +W
Sbjct: 193 MHGKIVGDQACKCSW 207
>gi|195449393|ref|XP_002072055.1| GK22641 [Drosophila willistoni]
gi|194168140|gb|EDW83041.1| GK22641 [Drosophila willistoni]
Length = 521
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 81/203 (39%), Positives = 113/203 (55%), Gaps = 25/203 (12%)
Query: 141 HFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAI 200
F+IFVGDLS E+ L F+ + SD RV+ D +T +S+G+GFVSF + +A+SAI
Sbjct: 180 QFHIFVGDLSSEIETQQLREAFTPFGEISDCRVVRDPQTLKSKGYGFVSFIKKSEAESAI 239
Query: 201 NDLTGKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNP 260
+ G+WLGSR IR NWAT+ K + ++V LT E N +P N
Sbjct: 240 TAMNGQWLGSRSIRTNWATR-------KPPASKENVKPLTF------DEVYNQSSPSN-- 284
Query: 261 QYTTVYVGNLAPEVTQLD---LHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAI 317
TVYVG + +T L L + F GA I+E+RV +DKG+ FVR+ST A AI
Sbjct: 285 --CTVYVGGVNSALTALSEEILQKTFTPYGA--IQEIRVFKDKGYAFVRFSTKEAATHAI 340
Query: 318 QMGNTTQSSYLFGKQMKCSWGSK 340
+ T+ L + +KCSWG +
Sbjct: 341 VGVHNTE---LNAQPVKCSWGKE 360
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 43/194 (22%), Positives = 93/194 (47%), Gaps = 29/194 (14%)
Query: 59 VYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKS----SYGFIHYFDRRSAAMAILSL 114
++VG++ +++ L+E F+ G + C+++R ++ YGF+ + + A AI ++
Sbjct: 183 IFVGDLSSEIETQQLREAFTPFGEISDCRVVRDPQTLKSKGYGFVSFIKKSEAESAITAM 242
Query: 115 NGRHLFGQPIKVNWA---------------YASGQREDTSGHFNIFVGDLSPEVT---DA 156
NG+ L + I+ NWA + + + + ++VG ++ +T +
Sbjct: 243 NGQWLGSRSIRTNWATRKPPASKENVKPLTFDEVYNQSSPSNCTVYVGGVNSALTALSEE 302
Query: 157 TLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCN 216
L F+ Y + + RV D +G+ FV F ++ A AI + L ++ ++C+
Sbjct: 303 ILQKTFTPYGAIQEIRVFKD------KGYAFVRFSTKEAATHAIVGVHNTELNAQPVKCS 356
Query: 217 WATKGAGNNEDKQS 230
W K +G+ + Q+
Sbjct: 357 WG-KESGDPNNAQT 369
>gi|357116772|ref|XP_003560152.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
[Brachypodium distachyon]
Length = 470
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 94/294 (31%), Positives = 146/294 (49%), Gaps = 27/294 (9%)
Query: 56 CRSVYVGNIHTQVTEPLLQEVFSSTGP--VEGCKLIRKDKSS----YGFIHYFDRRSAAM 109
RS+++G++ + E L F+ GP V K+IR ++ YGFI + R +A
Sbjct: 113 IRSLWIGDLQYWMDEAYLHNAFAPMGPQQVASVKIIRNKQTGQPEGYGFIEFHSRAAAEY 172
Query: 110 AILSLNGRHL--FGQPIKVNWAYASG--QREDTSGHFNIFVGDLSPEVTDATLFACFSV- 164
A+ S NG + P K+NWA AS +R D IFVGDL+ +VTD+ L F
Sbjct: 173 ALASFNGHAMPNVDLPFKLNWASASAGDRRGDDGSDHTIFVGDLASDVTDSMLQEIFKAS 232
Query: 165 YPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGN 224
YPS A V+ D+ TGRS+G+GFV F + + A+ ++ G L SRQ+R A N
Sbjct: 233 YPSVRGANVVTDRATGRSKGYGFVRFGDVNEQTRAMTEMNGVTLSSRQLRIG----PAAN 288
Query: 225 NEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFH 284
++ + S TNG + + +N+P TT++VG L + + L + F
Sbjct: 289 KKNMGTQQTYS----TNGYQSQSSQGNDV---QNDPNNTTIFVGGLDSNIDENYLRQVFT 341
Query: 285 SLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWG 338
G + V++ K GFV++++ + A AI N T + G ++ SWG
Sbjct: 342 PYGE--VGYVKIPVGKRCGFVQFTSRSCAEEAINALNGTP---IGGNNVRLSWG 390
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 87/194 (44%), Gaps = 34/194 (17%)
Query: 52 DPSTCRSVYVGNIHTQVTEPLLQEVFSSTGP-VEGCKLIRKDKSS-----YGFIHYFDRR 105
D + +++VG++ + VT+ +LQE+F ++ P V G ++ D+++ YGF+ + D
Sbjct: 204 DDGSDHTIFVGDLASDVTDSMLQEIFKASYPSVRGANVV-TDRATGRSKGYGFVRFGDVN 262
Query: 106 SAAMAILSLNGRHLFGQPIKVNWA-----------YASGQREDTSGHFN----------I 144
A+ +NG L + +++ A Y++ + S N I
Sbjct: 263 EQTRAMTEMNGVTLSSRQLRIGPAANKKNMGTQQTYSTNGYQSQSSQGNDVQNDPNNTTI 322
Query: 145 FVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLT 204
FVG L + + L F+ Y ++ ++ G FV F ++ A+ AIN L
Sbjct: 323 FVGGLDSNIDENYLRQVFTPYGEVGYVKIPVGKRCG------FVQFTSRSCAEEAINALN 376
Query: 205 GKWLGSRQIRCNWA 218
G +G +R +W
Sbjct: 377 GTPIGGNNVRLSWG 390
>gi|356519168|ref|XP_003528246.1| PREDICTED: RNA-binding post-transcriptional regulator csx1-like
[Glycine max]
Length = 410
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 100/304 (32%), Positives = 153/304 (50%), Gaps = 47/304 (15%)
Query: 57 RSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS----YGFIHYFDRRSAAMAIL 112
++V+VG++H + E L F+S G + K+IR ++ YGF+ ++ +A +
Sbjct: 78 KTVWVGDLHHWMDENYLHRCFASNGEISSIKVIRNKQTGLSEGYGFVEFYSHGTAEKVLQ 137
Query: 113 SLNGRHL--FGQPIKVNWA-YASG-QREDTSGHFNIFVGDLSPEVTDATLFACFS-VYPS 167
+ G + QP ++NWA + +G +R D +IFVGDL+ +VTD+ L FS YPS
Sbjct: 138 NYAGILMPNTEQPFRLNWATFGTGDKRSDNVPDLSIFVGDLAADVTDSMLHETFSNRYPS 197
Query: 168 CSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT--KGAGNN 225
A+V++D TGRS+G+GFV F + + A+ ++ G + SR +R AT K +G
Sbjct: 198 VKAAKVVFDANTGRSKGYGFVRFGDDDERSQAMTEMNGVYCSSRPMRIGAATPRKTSGYQ 257
Query: 226 EDKQSSDAKSVVELTNG-SSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFH 284
+ QS NG SS+ ++TN TT++VG L VT DL + F
Sbjct: 258 QGSQS----------NGISSQSEADSTN----------TTIFVGGLDSNVTAEDLKQPFS 297
Query: 285 SLGAGVIEEVRVQRDKGFGFVRYST------HAEAALAIQMGNTTQSSYLFGKQM-KCSW 337
G I V++ KG GF ++ +AE AL G T GKQM + SW
Sbjct: 298 QYGE--IVSVKIPVGKGCGFTICNSRSPGPKNAEEALQKLNGTT------IGKQMVRLSW 349
Query: 338 GSKP 341
G P
Sbjct: 350 GRNP 353
>gi|195110887|ref|XP_002000011.1| GI22766 [Drosophila mojavensis]
gi|193916605|gb|EDW15472.1| GI22766 [Drosophila mojavensis]
Length = 387
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 82/216 (37%), Positives = 116/216 (53%), Gaps = 25/216 (11%)
Query: 135 REDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQ 194
R F+IFVGDLS E+ L F+ + SD RV+ D +T +S+G+GFVSF +
Sbjct: 38 RRRRQKQFHIFVGDLSSEIETQQLREAFTPFGEISDCRVVRDPQTLKSKGYGFVSFIKKS 97
Query: 195 DAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTE 254
+A+SAI + G+WLGSR IR NWAT+ K + +++ LT E N
Sbjct: 98 EAESAITAMNGQWLGSRSIRTNWATR-------KPPASKENIKPLTF------DEVYNQS 144
Query: 255 APENNPQYTTVYVGNLAPEVTQLD---LHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHA 311
+P N TVYVG + +T L L + F GA I+E+RV +DKG+ FVR+ST
Sbjct: 145 SPSN----CTVYVGGVNSALTALSEEVLQKTFAPYGA--IQEIRVFKDKGYAFVRFSTKE 198
Query: 312 EAALAIQMGNTTQSSYLFGKQMKCSWGSKPTPPGTS 347
A AI + T+ + + +KCSWG + P S
Sbjct: 199 AATHAIVGVHNTE---INAQPVKCSWGKESGDPNNS 231
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/194 (21%), Positives = 93/194 (47%), Gaps = 29/194 (14%)
Query: 59 VYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKS----SYGFIHYFDRRSAAMAILSL 114
++VG++ +++ L+E F+ G + C+++R ++ YGF+ + + A AI ++
Sbjct: 47 IFVGDLSSEIETQQLREAFTPFGEISDCRVVRDPQTLKSKGYGFVSFIKKSEAESAITAM 106
Query: 115 NGRHLFGQPIKVNWA---------------YASGQREDTSGHFNIFVGDLSPEVT---DA 156
NG+ L + I+ NWA + + + + ++VG ++ +T +
Sbjct: 107 NGQWLGSRSIRTNWATRKPPASKENIKPLTFDEVYNQSSPSNCTVYVGGVNSALTALSEE 166
Query: 157 TLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCN 216
L F+ Y + + RV D +G+ FV F ++ A AI + + ++ ++C+
Sbjct: 167 VLQKTFAPYGAIQEIRVFKD------KGYAFVRFSTKEAATHAIVGVHNTEINAQPVKCS 220
Query: 217 WATKGAGNNEDKQS 230
W K +G+ + Q+
Sbjct: 221 WG-KESGDPNNSQT 233
>gi|195055815|ref|XP_001994808.1| GH17439 [Drosophila grimshawi]
gi|193892571|gb|EDV91437.1| GH17439 [Drosophila grimshawi]
Length = 520
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 81/210 (38%), Positives = 115/210 (54%), Gaps = 25/210 (11%)
Query: 141 HFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAI 200
F+IFVGDLS E+ L F+ + SD RV+ D +T +S+G+GFVSF + +A+SAI
Sbjct: 177 QFHIFVGDLSSEIETQQLREAFTPFGEISDCRVVRDPQTLKSKGYGFVSFIKKSEAESAI 236
Query: 201 NDLTGKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNP 260
+ G+WLGSR IR NWAT+ K + +++ LT E N +P N
Sbjct: 237 TAMNGQWLGSRSIRTNWATR-------KPPASKENIKPLTF------DEVYNQSSPSN-- 281
Query: 261 QYTTVYVGNLAPEVTQLD---LHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAI 317
TVYVG + +T L L + F GA I+E+RV +DKG+ FVR+ST A AI
Sbjct: 282 --CTVYVGGVNSALTALSEEILQKTFALYGA--IQEIRVFKDKGYAFVRFSTKEAATHAI 337
Query: 318 QMGNTTQSSYLFGKQMKCSWGSKPTPPGTS 347
+ T+ + + +KCSWG + P S
Sbjct: 338 VGVHNTE---INAQPVKCSWGKESGDPNNS 364
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/194 (21%), Positives = 94/194 (48%), Gaps = 29/194 (14%)
Query: 59 VYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKS----SYGFIHYFDRRSAAMAILSL 114
++VG++ +++ L+E F+ G + C+++R ++ YGF+ + + A AI ++
Sbjct: 180 IFVGDLSSEIETQQLREAFTPFGEISDCRVVRDPQTLKSKGYGFVSFIKKSEAESAITAM 239
Query: 115 NGRHLFGQPIKVNWA---------------YASGQREDTSGHFNIFVGDLSPEVT---DA 156
NG+ L + I+ NWA + + + + ++VG ++ +T +
Sbjct: 240 NGQWLGSRSIRTNWATRKPPASKENIKPLTFDEVYNQSSPSNCTVYVGGVNSALTALSEE 299
Query: 157 TLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCN 216
L F++Y + + RV D +G+ FV F ++ A AI + + ++ ++C+
Sbjct: 300 ILQKTFALYGAIQEIRVFKD------KGYAFVRFSTKEAATHAIVGVHNTEINAQPVKCS 353
Query: 217 WATKGAGNNEDKQS 230
W K +G+ + Q+
Sbjct: 354 WG-KESGDPNNSQT 366
>gi|119620231|gb|EAW99825.1| TIA1 cytotoxic granule-associated RNA binding protein, isoform
CRA_c [Homo sapiens]
Length = 144
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 59/108 (54%), Positives = 81/108 (75%), Gaps = 1/108 (0%)
Query: 114 LNGRHLFGQPIKVNWAYA-SGQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDAR 172
+NGR + G+ +KVNWA S Q++DTS HF++FVGDLSPE+T + A F+ + SDAR
Sbjct: 1 MNGRKIMGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKAAFAPFGRISDAR 60
Query: 173 VMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATK 220
V+ D TG+S+G+GFVSF N+ DA++AI + G+WLG RQIR NWAT+
Sbjct: 61 VVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATR 108
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 59/114 (51%), Gaps = 15/114 (13%)
Query: 241 NGSSEDGKE------TTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLG----AGV 290
NG GKE TT + ++ + V+VG+L+PE+T D+ F G A V
Sbjct: 2 NGRKIMGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKAAFAPFGRISDARV 61
Query: 291 IEEVRVQRDKGFGFVRYSTHAEAALAI-QMGNTTQSSYLFGKQMKCSWGSKPTP 343
++++ + KG+GFV + +A AI QMG +L G+Q++ +W ++ P
Sbjct: 62 VKDMATGKSKGYGFVSFFNKWDAENAIQQMG----GQWLGGRQIRTNWATRKPP 111
Score = 46.2 bits (108), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 43/82 (52%), Gaps = 4/82 (4%)
Query: 52 DPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRK----DKSSYGFIHYFDRRSA 107
D S V+VG++ ++T ++ F+ G + ++++ YGF+ +F++ A
Sbjct: 25 DTSNHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDA 84
Query: 108 AMAILSLNGRHLFGQPIKVNWA 129
AI + G+ L G+ I+ NWA
Sbjct: 85 ENAIQQMGGQWLGGRQIRTNWA 106
>gi|367014399|ref|XP_003681699.1| hypothetical protein TDEL_0E02450 [Torulaspora delbrueckii]
gi|359749360|emb|CCE92488.1| hypothetical protein TDEL_0E02450 [Torulaspora delbrueckii]
Length = 472
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 102/338 (30%), Positives = 167/338 (49%), Gaps = 45/338 (13%)
Query: 41 PIPSGNLPPGFDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGP--VEGCKLIRKDKSS--- 95
P SGN+ S +Y+G++ E +++ +++S G VE KL+ ++++
Sbjct: 32 PAQSGNVRLSGSQSRNNQLYMGDLDPSWDENVIRSIWNSLGESNVE-IKLMWNNRNAGVR 90
Query: 96 ----YGFIHYFDRRSAAMAILSLNGRHLFGQP---IKVNWAYASGQREDTSGHFNIFVGD 148
Y F+ + R A+ A+L NG + G P +++NW+ ASG D S ++FVGD
Sbjct: 91 THLGYCFVQFSSRSQASNALLK-NGMAIPGYPSKTLRLNWSSASGNSADGSNEISVFVGD 149
Query: 149 LSPEVTDATLFACF-SVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKW 207
L+P VT++ LF F S PS S+A+VM+DQ TG S+G+ FV F NQ+D Q A+ ++TG +
Sbjct: 150 LAPNVTESDLFELFISKCPSTSNAKVMYDQVTGVSKGYAFVRFGNQEDQQRALQEMTGTF 209
Query: 208 LGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETT---------------- 251
L R IR + G N ++ ++ ++ N + K
Sbjct: 210 LKGRAIRV--GSAGHQNQRNRNGPGLENKLKGLNATVSSPKPANISSTNFSQFILPTQQL 267
Query: 252 ---NTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYS 308
N+ NN TT++V +L+ VT+ +L F G + ++ +K GFV+Y
Sbjct: 268 PPLNSFTDRNN---TTLFVSSLSHMVTENELKAFFQPFGNVIY--AKLPENKQCGFVQYV 322
Query: 309 THAEAALAIQMGNTTQSSYLFGKQMKCSWGSKPTPPGT 346
A A +AI Q + G ++K SWG +P P
Sbjct: 323 DRASAEMAIL---KLQGFPIRGSRIKISWG-RPAKPAV 356
>gi|198451107|ref|XP_002137227.1| GA26680 [Drosophila pseudoobscura pseudoobscura]
gi|198131338|gb|EDY67785.1| GA26680 [Drosophila pseudoobscura pseudoobscura]
Length = 503
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 81/207 (39%), Positives = 114/207 (55%), Gaps = 25/207 (12%)
Query: 141 HFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAI 200
F+IFVGDLS E+ L F+ + SD RV+ D +T +S+G+GFVSF + +A+SAI
Sbjct: 171 QFHIFVGDLSSEIETQQLREAFTPFGEISDCRVVRDPQTLKSKGYGFVSFIKKSEAESAI 230
Query: 201 NDLTGKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNP 260
+ G+WLGSR IR NWAT+ K + +++ LT E N +P N
Sbjct: 231 TAMNGQWLGSRSIRTNWATR-------KPPASKENIKPLTF------DEVYNQSSPSN-- 275
Query: 261 QYTTVYVGNLAPEVTQLD---LHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAI 317
TVYVG + +T L L + F GA I+E+RV +DKG+ FVR+ST A AI
Sbjct: 276 --CTVYVGGVNSALTALSEEVLQKTFAPYGA--IQEIRVFKDKGYAFVRFSTKEAATHAI 331
Query: 318 QMGNTTQSSYLFGKQMKCSWGSKPTPP 344
+ T+ L + +KCSWG + P
Sbjct: 332 VGVHNTE---LNAQPVKCSWGKESGDP 355
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 43/194 (22%), Positives = 93/194 (47%), Gaps = 29/194 (14%)
Query: 59 VYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKS----SYGFIHYFDRRSAAMAILSL 114
++VG++ +++ L+E F+ G + C+++R ++ YGF+ + + A AI ++
Sbjct: 174 IFVGDLSSEIETQQLREAFTPFGEISDCRVVRDPQTLKSKGYGFVSFIKKSEAESAITAM 233
Query: 115 NGRHLFGQPIKVNWA---------------YASGQREDTSGHFNIFVGDLSPEVT---DA 156
NG+ L + I+ NWA + + + + ++VG ++ +T +
Sbjct: 234 NGQWLGSRSIRTNWATRKPPASKENIKPLTFDEVYNQSSPSNCTVYVGGVNSALTALSEE 293
Query: 157 TLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCN 216
L F+ Y + + RV D +G+ FV F ++ A AI + L ++ ++C+
Sbjct: 294 VLQKTFAPYGAIQEIRVFKD------KGYAFVRFSTKEAATHAIVGVHNTELNAQPVKCS 347
Query: 217 WATKGAGNNEDKQS 230
W K +G+ + Q+
Sbjct: 348 WG-KESGDPNNAQT 360
>gi|195143945|ref|XP_002012957.1| GL23648 [Drosophila persimilis]
gi|194101900|gb|EDW23943.1| GL23648 [Drosophila persimilis]
Length = 503
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 81/207 (39%), Positives = 114/207 (55%), Gaps = 25/207 (12%)
Query: 141 HFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAI 200
F+IFVGDLS E+ L F+ + SD RV+ D +T +S+G+GFVSF + +A+SAI
Sbjct: 171 QFHIFVGDLSSEIETQQLREAFTPFGEISDCRVVRDPQTLKSKGYGFVSFIKKSEAESAI 230
Query: 201 NDLTGKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNP 260
+ G+WLGSR IR NWAT+ K + +++ LT E N +P N
Sbjct: 231 TAMNGQWLGSRSIRTNWATR-------KPPASKENIKPLTF------DEVYNQSSPSN-- 275
Query: 261 QYTTVYVGNLAPEVTQLD---LHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAI 317
TVYVG + +T L L + F GA I+E+RV +DKG+ FVR+ST A AI
Sbjct: 276 --CTVYVGGVNSALTALSEEVLQKTFAPYGA--IQEIRVFKDKGYAFVRFSTKEAATHAI 331
Query: 318 QMGNTTQSSYLFGKQMKCSWGSKPTPP 344
+ T+ L + +KCSWG + P
Sbjct: 332 VGVHNTE---LNAQPVKCSWGKESGDP 355
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 43/194 (22%), Positives = 93/194 (47%), Gaps = 29/194 (14%)
Query: 59 VYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKS----SYGFIHYFDRRSAAMAILSL 114
++VG++ +++ L+E F+ G + C+++R ++ YGF+ + + A AI ++
Sbjct: 174 IFVGDLSSEIETQQLREAFTPFGEISDCRVVRDPQTLKSKGYGFVSFIKKSEAESAITAM 233
Query: 115 NGRHLFGQPIKVNWA---------------YASGQREDTSGHFNIFVGDLSPEVT---DA 156
NG+ L + I+ NWA + + + + ++VG ++ +T +
Sbjct: 234 NGQWLGSRSIRTNWATRKPPASKENIKPLTFDEVYNQSSPSNCTVYVGGVNSALTALSEE 293
Query: 157 TLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCN 216
L F+ Y + + RV D +G+ FV F ++ A AI + L ++ ++C+
Sbjct: 294 VLQKTFAPYGAIQEIRVFKD------KGYAFVRFSTKEAATHAIVGVHNTELNAQPVKCS 347
Query: 217 WATKGAGNNEDKQS 230
W K +G+ + Q+
Sbjct: 348 WG-KESGDPNNAQT 360
>gi|21592583|gb|AAM64532.1| putative DNA binding protein [Arabidopsis thaliana]
Length = 404
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 94/314 (29%), Positives = 148/314 (47%), Gaps = 37/314 (11%)
Query: 43 PSGNLPPGFDPSTC---RSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS---- 95
P PP P+T R++++G++ + E L F+ TG + K+IR ++
Sbjct: 44 PQAAAPPSVQPTTADEIRTLWIGDLQYWMDENFLYGCFAHTGEMVSAKVIRNKQTGQVEG 103
Query: 96 YGFIHYFDRRSAAMAILSLNGRHLFGQP---IKVNWA-YASGQREDTSGHFNIFVGDLSP 151
YGFI + +A + + N + P ++ WA +SG + D S + IFVGDL+
Sbjct: 104 YGFIEFASHAAAERVLQTFNNAPIPSFPDQLFRLXWASLSSGDKRDDSPDYTIFVGDLAA 163
Query: 152 EVTDATLFACF-SVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGS 210
+VTD L F + YPS A+V+ ++ TGR++G+GFV F ++ + A+ ++ G +
Sbjct: 164 DVTDYILLETFRASYPSVKGAKVVINRVTGRTKGYGFVRFSDESEQIRAMTEMNGVPCST 223
Query: 211 RQIRCNWAT--KGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVG 268
R +R A KG D S A V +N+P TTV+VG
Sbjct: 224 RPMRIGPAASKKGVTGQRDSYQSSAAGVTT------------------DNDPNNTTVFVG 265
Query: 269 NLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYL 328
L VT L F G I V++ K GFV++S + A A++M N Q L
Sbjct: 266 GLDASVTDDHLKNVFSQYGE--IVHVKIPAGKRCGFVQFSEKSCAEEALRMLNGVQ---L 320
Query: 329 FGKQMKCSWGSKPT 342
G ++ SWG P+
Sbjct: 321 GGTTVRLSWGRSPS 334
Score = 41.6 bits (96), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 44/85 (51%), Gaps = 3/85 (3%)
Query: 52 DPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSSYGFIHYFDRRSAAMAI 111
DP+ +V+VG + VT+ L+ VFS G + K+ + GF+ + ++ A A+
Sbjct: 256 DPNNT-TVFVGGLDASVTDDHLKNVFSQYGEIVHVKIPAGKRC--GFVQFSEKSCAEEAL 312
Query: 112 LSLNGRHLFGQPIKVNWAYASGQRE 136
LNG L G ++++W + ++
Sbjct: 313 RMLNGVQLGGTTVRLSWGRSPSNKQ 337
>gi|358254799|dbj|GAA56358.1| nucleolysin TIA-1 isoform p40 [Clonorchis sinensis]
Length = 508
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 72/215 (33%), Positives = 118/215 (54%), Gaps = 27/215 (12%)
Query: 131 ASGQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSF 190
++ Q F+IFVGDL+P++ L A F+ + + ++ +++ D T + +G+GFV++
Sbjct: 25 SANQELSNDDSFHIFVGDLAPDIEGDVLLAAFNTFGNVTECKIIKDMHTQKPKGYGFVAY 84
Query: 191 RNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSSDAKSV--VELTNGSSEDGK 248
+++++A+ AI + G+ LGSR IR NWA + + Q+ D + + VE+ N SS
Sbjct: 85 KSREEAERAIQVMNGQILGSRAIRTNWAVR---RDPADQAKDHRPLNYVEVFNASSASN- 140
Query: 249 ETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYS 308
TT+YVG + +T+L L F G I+E+R+ ++KGF F+R+
Sbjct: 141 --------------TTIYVGGITSGLTELLLQNAFQEFGE--IKEIRIFKEKGFSFIRFD 184
Query: 309 THAEAALAIQMGNTTQSSYLFGKQ-MKCSWGSKPT 342
+HA A AI T L G Q KCSWG +PT
Sbjct: 185 SHAAATRAI----VTMHGRLVGDQSCKCSWGKEPT 215
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 80/179 (44%), Gaps = 26/179 (14%)
Query: 59 VYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIR----KDKSSYGFIHYFDRRSAAMAILSL 114
++VG++ + +L F++ G V CK+I+ + YGF+ Y R A AI +
Sbjct: 38 IFVGDLAPDIEGDVLLAAFNTFGNVTECKIIKDMHTQKPKGYGFVAYKSREEAERAIQVM 97
Query: 115 NGRHLFGQPIKVNWAYASGQREDTSGH--------FN--------IFVGDLSPEVTDATL 158
NG+ L + I+ NWA + H FN I+VG ++ +T+ L
Sbjct: 98 NGQILGSRAIRTNWAVRRDPADQAKDHRPLNYVEVFNASSASNTTIYVGGITSGLTELLL 157
Query: 159 FACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNW 217
F + + R+ + +GF F+ F + A AI + G+ +G + +C+W
Sbjct: 158 QNAFQEFGEIKEIRIF------KEKGFSFIRFDSHAAATRAIVTMHGRLVGDQSCKCSW 210
Score = 43.5 bits (101), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 40/71 (56%), Gaps = 2/71 (2%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSSYGFIHYFDRRSAAMAILSLNGR 117
++YVG I + +TE LLQ F G ++ ++ + + + FI + +A AI++++GR
Sbjct: 142 TIYVGGITSGLTELLLQNAFQEFGEIKEIRIFK--EKGFSFIRFDSHAAATRAIVTMHGR 199
Query: 118 HLFGQPIKVNW 128
+ Q K +W
Sbjct: 200 LVGDQSCKCSW 210
>gi|15220233|ref|NP_175180.1| RNA-binding protein 47C [Arabidopsis thaliana]
gi|75337807|sp|Q9SX79.1|RB47C_ARATH RecName: Full=Polyadenylate-binding protein RBP47C;
Short=Poly(A)-binding protein RBP47C; AltName:
Full=RNA-binding protein 47C; Short=AtRBP47C
gi|5668812|gb|AAD46038.1|AC007519_23 Contains 3 PF|00076 RNA recognition motif domains. ESTs gb|R30092,
gb|R30093, gb|AA394338, gb|N65719 and gb|AA597577 come
from this gene [Arabidopsis thaliana]
gi|12744993|gb|AAK06876.1|AF344325_1 putative DNA binding protein [Arabidopsis thaliana]
gi|14334552|gb|AAK59684.1| putative DNA binding protein [Arabidopsis thaliana]
gi|17065624|gb|AAL33806.1| putative DNA binding protein [Arabidopsis thaliana]
gi|332194053|gb|AEE32174.1| RNA-binding protein 47C [Arabidopsis thaliana]
Length = 432
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 95/300 (31%), Positives = 146/300 (48%), Gaps = 38/300 (12%)
Query: 57 RSVYVGNIHTQVTEPLLQEVFSSTGPVE--GCKLIRKDKSS----YGFIHYFDRRSAAMA 110
++++VG++H + E L F+S E K+IR + YGF+ + A
Sbjct: 101 KTIWVGDLHHWMDEAYLNSSFASGDEREIVSVKVIRNKNNGLSEGYGFVEFESHDVADKV 160
Query: 111 ILSLNGRHL--FGQPIKVNWA-YASGQR--EDTSGHFNIFVGDLSPEVTDATLFACFS-V 164
+ NG + QP ++NWA +++G++ E+ +IFVGDLSP+V+D L FS
Sbjct: 161 LREFNGTTMPNTDQPFRLNWASFSTGEKRLENNGPDLSIFVGDLSPDVSDNLLHETFSEK 220
Query: 165 YPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGN 224
YPS A+V+ D TGRS+G+GFV F ++ + A+ ++ G SR +R AT
Sbjct: 221 YPSVKAAKVVLDANTGRSKGYGFVRFGDENERTKAMTEMNGVKCSSRAMRIGPATP---- 276
Query: 225 NEDKQSSDAKSVVELTNGSSEDGKETTN--TEAPENNPQYTTVYVGNLAPEVTQLDLHRH 282
TNG + G N PE + TT++VG L VT DL +
Sbjct: 277 -------------RKTNGYQQQGGYMPNGTLTRPEGDIMNTTIFVGGLDSSVTDEDLKQP 323
Query: 283 FHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQ-MKCSWGSKP 341
F+ G I V++ KG GFV++ A A++ N T + GKQ ++ SWG P
Sbjct: 324 FNEFGE--IVSVKIPVGKGCGFVQFVNRPNAEEALEKLNGT----VIGKQTVRLSWGRNP 377
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 82/197 (41%), Gaps = 32/197 (16%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGP-VEGCKLIRKDKSS----YGFIHYFDRRSAAMAIL 112
S++VG++ V++ LL E FS P V+ K++ + YGF+ + D A+
Sbjct: 198 SIFVGDLSPDVSDNLLHETFSEKYPSVKAAKVVLDANTGRSKGYGFVRFGDENERTKAMT 257
Query: 113 SLNG--------RHLFGQPIKVNWAYASG---------QREDTSGHFNIFVGDLSPEVTD 155
+NG R P K N G + E + IFVG L VTD
Sbjct: 258 EMNGVKCSSRAMRIGPATPRKTNGYQQQGGYMPNGTLTRPEGDIMNTTIFVGGLDSSVTD 317
Query: 156 ATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRC 215
L F+ + ++ +G GFV F N+ +A+ A+ L G +G + +R
Sbjct: 318 EDLKQPFNEFGEIVSVKIP------VGKGCGFVQFVNRPNAEEALEKLNGTVIGKQTVRL 371
Query: 216 NWATKGAGNNEDKQSSD 232
+W A +KQ D
Sbjct: 372 SWGRNPA----NKQPRD 384
>gi|357163840|ref|XP_003579863.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
[Brachypodium distachyon]
Length = 428
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 97/306 (31%), Positives = 148/306 (48%), Gaps = 40/306 (13%)
Query: 57 RSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS----YGFIHYFDRRSAAMAIL 112
++++VG++ + E L F +G V K+IR ++ YGF+ ++ SA A+
Sbjct: 104 KTIWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRQTGQTEGYGFVEFYSHASADKALQ 163
Query: 113 SLNGRHL--FGQPIKVNWA-YASGQ-REDTSGHFNIFVGDLSPEVTDATLFACF-SVYPS 167
+ G + +P K+NWA Y+ G+ R + +IFVGDL+ +VTD L F S Y S
Sbjct: 164 NFTGHAMPNTDRPFKLNWASYSMGEKRSEVVSDHSIFVGDLAADVTDEMLMELFASKYRS 223
Query: 168 CSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNED 227
A+V+ D TGRSRG+GFV F D A+ ++ G + +R IR AT +
Sbjct: 224 VKGAKVIIDANTGRSRGYGFVRFGEDSDKSRAMTEMNGVYCSTRPIRIGPATPRRTAGDS 283
Query: 228 KQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLG 287
S+ S DG T TVYVG L P V++ +L + F G
Sbjct: 284 GSSTPGHS----------DGDSTNR-----------TVYVGGLDPNVSEDELRKSFAKYG 322
Query: 288 AGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQ-MKCSWGSKPT---P 343
+ V++ + K GFV+Y +A A+Q N + + GKQ ++ SWG P+ P
Sbjct: 323 D--VASVKIPQGKQCGFVQYVNRTDAEEALQGLNGS----VIGKQAVRLSWGRSPSHKQP 376
Query: 344 PGTSSN 349
G S N
Sbjct: 377 RGDSGN 382
>gi|115479619|ref|NP_001063403.1| Os09g0462700 [Oryza sativa Japonica Group]
gi|113631636|dbj|BAF25317.1| Os09g0462700, partial [Oryza sativa Japonica Group]
Length = 441
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 95/307 (30%), Positives = 146/307 (47%), Gaps = 40/307 (13%)
Query: 47 LPPGFDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS----YGFIHYF 102
+P G ++++VG++H + E L F TG V K+IR ++ YGF+ ++
Sbjct: 105 VPRGGGQEENKTIWVGDLHYWMDENYLHSCFGYTGEVVAIKVIRNKQTGQSEGYGFVEFY 164
Query: 103 DRRSAAMAILSLNGRHLF---GQPIKVNWAYAS--GQREDTSGHFNIFVGDLSPEVTDAT 157
+A + G H+ QP ++NWA S +R D + +IFVGDL+ +V D T
Sbjct: 165 SHAAAEKVLEGFAG-HIMPNTDQPFRINWASFSMGDRRSDIASDHSIFVGDLASDVNDTT 223
Query: 158 LFACFSV-YPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCN 216
L FS Y S A+V+ D TGRS+G+GFV F + + A+ ++ G + +R +R
Sbjct: 224 LLETFSKRYSSVKGAKVVIDANTGRSKGYGFVRFGDDNEKTHAMTEMNGVYCSTRPMRIG 283
Query: 217 WAT-KGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVT 275
AT + S A+S +LTN TTV+VG L P V+
Sbjct: 284 PATPRKTSGTSGPTGSAARSDGDLTN---------------------TTVFVGGLDPNVS 322
Query: 276 QLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQ-MK 334
+ DL + F G I V++ K GFV++ A A+Q N + GKQ ++
Sbjct: 323 EDDLRQTFSQYGE--ISSVKIPVGKQCGFVQFVQRKNAEDALQGLNGS----TIGKQTVR 376
Query: 335 CSWGSKP 341
SWG P
Sbjct: 377 LSWGRNP 383
>gi|195353012|ref|XP_002043004.1| GM16370 [Drosophila sechellia]
gi|194127069|gb|EDW49112.1| GM16370 [Drosophila sechellia]
Length = 504
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 80/207 (38%), Positives = 115/207 (55%), Gaps = 25/207 (12%)
Query: 141 HFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAI 200
F+IFVGDLS E+ L F+ + SD RV+ D +T +S+G+GFVSF + +A+SAI
Sbjct: 164 QFHIFVGDLSSEIETQQLREAFTPFGEISDCRVVRDPQTLKSKGYGFVSFIKKSEAESAI 223
Query: 201 NDLTGKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNP 260
+ G+WLGSR IR NWAT+ K ++ +++ LT E N +P N
Sbjct: 224 TAMNGQWLGSRSIRTNWATR-------KPPANKENIKPLTF------DEVYNQSSPSN-- 268
Query: 261 QYTTVYVGNLAPEVTQLD---LHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAI 317
TVYVG + +T L L + F GA I+E+RV +DKG+ FVR+ST A AI
Sbjct: 269 --CTVYVGGVNSALTALSEEVLQKTFAPYGA--IQEIRVFKDKGYAFVRFSTKEAATHAI 324
Query: 318 QMGNTTQSSYLFGKQMKCSWGSKPTPP 344
+ T+ + + +KCSWG + P
Sbjct: 325 VGVHNTE---INAQPVKCSWGKESGDP 348
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/194 (21%), Positives = 93/194 (47%), Gaps = 29/194 (14%)
Query: 59 VYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKS----SYGFIHYFDRRSAAMAILSL 114
++VG++ +++ L+E F+ G + C+++R ++ YGF+ + + A AI ++
Sbjct: 167 IFVGDLSSEIETQQLREAFTPFGEISDCRVVRDPQTLKSKGYGFVSFIKKSEAESAITAM 226
Query: 115 NGRHLFGQPIKVNWA---------------YASGQREDTSGHFNIFVGDLSPEVT---DA 156
NG+ L + I+ NWA + + + + ++VG ++ +T +
Sbjct: 227 NGQWLGSRSIRTNWATRKPPANKENIKPLTFDEVYNQSSPSNCTVYVGGVNSALTALSEE 286
Query: 157 TLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCN 216
L F+ Y + + RV D +G+ FV F ++ A AI + + ++ ++C+
Sbjct: 287 VLQKTFAPYGAIQEIRVFKD------KGYAFVRFSTKEAATHAIVGVHNTEINAQPVKCS 340
Query: 217 WATKGAGNNEDKQS 230
W K +G+ + Q+
Sbjct: 341 WG-KESGDPNNAQT 353
>gi|254566455|ref|XP_002490338.1| RNA binding protein that negatively regulates growth rate
[Komagataella pastoris GS115]
gi|238030134|emb|CAY68057.1| RNA binding protein that negatively regulates growth rate
[Komagataella pastoris GS115]
gi|328350732|emb|CCA37132.1| Uncharacterized RNA-binding protein C23E6.01c [Komagataella
pastoris CBS 7435]
Length = 506
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 95/312 (30%), Positives = 151/312 (48%), Gaps = 33/312 (10%)
Query: 56 CRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRK---------------DKSSYGFIH 100
R++++G++ E + +++ G KLIR + Y F+
Sbjct: 51 SRTLWMGDLEPWWVEENIIQLWQQLGQSVRVKLIRSRHNRSPNPNSSLPPPQNAGYCFVE 110
Query: 101 YFDRRSAAMAILSLNGRHL---FGQPIKVNWAYASGQREDT--SGHFNIFVGDLSPEVTD 155
F+R A+ L+LNG + G+ ++NWA + + +++FVGDLSP T+
Sbjct: 111 -FERHEDALQALALNGSIVPRSSGRLFRLNWASGPTLQSQIPPTPQYSLFVGDLSPSTTE 169
Query: 156 ATLFACFSV-YPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIR 214
A L A F Y S RVM D TG SR FGFV F ++D Q A+++++G WLG R IR
Sbjct: 170 AHLLALFQPNYSSIQSVRVMTDPATGSSRCFGFVRFTEEEDRQRALHEMSGIWLGGRPIR 229
Query: 215 CNWAT-KGAGNN--EDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLA 271
AT +GAG+ + +Q + + + + N N+P +TV+VG LA
Sbjct: 230 VALATPRGAGHQPVQMQQHLQYAPSAPMVPQFASNNSSSRNI---YNDPTNSTVFVGGLA 286
Query: 272 PEVTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGK 331
V++ L F G+ I +++ R KG GFV++ST EA AI + + G
Sbjct: 287 AGVSEETLFTLFEPFGS--ISSIKIPRGKGCGFVKFSTREEAENAI---SGMHGFLIGGS 341
Query: 332 QMKCSWGSKPTP 343
+++ SWG P
Sbjct: 342 RVRLSWGRSSLP 353
>gi|413922759|gb|AFW62691.1| hypothetical protein ZEAMMB73_026342 [Zea mays]
Length = 430
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 96/295 (32%), Positives = 144/295 (48%), Gaps = 37/295 (12%)
Query: 57 RSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS----YGFIHYFDRRSAAMAIL 112
R+++VG++ + E L F S+G V K+IR S YGFI ++ SA A+
Sbjct: 104 RTIWVGDLQYWMDENYLHSCFGSSGEVVNIKVIRNRHSGVSEGYGFIEFYTHVSAEKALQ 163
Query: 113 SLNGRHL--FGQPIKVNWA-YASGQ-REDTSGHFNIFVGDLSPEVTDATLFACFS-VYPS 167
+ +G + + K+NWA Y+ G+ R + S +IFVGDL+ +VTDA L FS Y S
Sbjct: 164 NFSGHVMPNTDRAFKLNWASYSMGEKRSEISSDHSIFVGDLAVDVTDAMLLELFSNKYRS 223
Query: 168 CSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNED 227
A+V+ D TGRSRG+GFV F + D A+ ++ G + +R IR AT +
Sbjct: 224 VKGAKVIIDANTGRSRGYGFVRFGDDNDKIHAMTEMNGVYCSTRPIRVGPATPRRSQGDS 283
Query: 228 KQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLG 287
S +S V+ TN TVYVG L P V++ +L + F G
Sbjct: 284 GTSPPRQSHVDSTN---------------------RTVYVGGLDPNVSEDELRKAFAKYG 322
Query: 288 AGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQ-MKCSWGSKP 341
+ V++ K GFV++ +A A+ N + GKQ ++ SWG P
Sbjct: 323 D--LASVKIPFGKQCGFVQFVNRVDAEEALHGLNGST----IGKQAVRLSWGRSP 371
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 89/181 (49%), Gaps = 22/181 (12%)
Query: 54 STCRSVYVGNIHTQVTEPLLQEVFSST-GPVEGCKLIRKDKSS----YGFIHYFDRRSAA 108
S+ S++VG++ VT+ +L E+FS+ V+G K+I + YGF+ + D
Sbjct: 194 SSDHSIFVGDLAVDVTDAMLLELFSNKYRSVKGAKVIIDANTGRSRGYGFVRFGDDNDKI 253
Query: 109 MAILSLNGRHLFGQPIKVNWAYASGQREDT-----------SGHFNIFVGDLSPEVTDAT 157
A+ +NG + +PI+V A + D+ S + ++VG L P V++
Sbjct: 254 HAMTEMNGVYCSTRPIRVGPATPRRSQGDSGTSPPRQSHVDSTNRTVYVGGLDPNVSEDE 313
Query: 158 LFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNW 217
L F+ Y + ++ + ++ G FV F N+ DA+ A++ L G +G + +R +W
Sbjct: 314 LRKAFAKYGDLASVKIPFGKQCG------FVQFVNRVDAEEALHGLNGSTIGKQAVRLSW 367
Query: 218 A 218
Sbjct: 368 G 368
>gi|255073999|ref|XP_002500674.1| predicted protein [Micromonas sp. RCC299]
gi|226515937|gb|ACO61932.1| predicted protein [Micromonas sp. RCC299]
Length = 440
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 91/294 (30%), Positives = 150/294 (51%), Gaps = 26/294 (8%)
Query: 56 CRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS----YGFIHYFDRRSAAMAI 111
++++VG++ + E L F+ G + K+IR ++ YGF+ + DR +A A+
Sbjct: 12 VKTLWVGDLGYWMEESYLHTCFAHFGAIGSVKIIRNKQTGFSEGYGFVEFVDRATAEHAL 71
Query: 112 LSLNGRHLFG--QPIKVNWA-----YASGQREDTSGHFNIFVGDLSPEVTDATLFACFS- 163
+LNG + Q ++NWA +G + ++FVGDL PEV D L F+
Sbjct: 72 KTLNGTPMPSAHQNFRLNWASFGVGGGAGGAGGAANDHSVFVGDLPPEVNDYALQETFAE 131
Query: 164 VYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAG 223
YPS +ARV+ D TGRS+GFGFV F ++ + A+ ++ G GSR +R + A
Sbjct: 132 RYPSVRNARVVTDPNTGRSKGFGFVRFGDEGERDRALVEMNGVPCGSRVMRISLAIP--- 188
Query: 224 NNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHF 283
++ D + + + + APE P+ +TV+VG L P +T+ DL HF
Sbjct: 189 ----RKGVDGVGGGGVGSNTGVGSNGVGGSPAPE--PENSTVFVGGLDPTLTEPDLRTHF 242
Query: 284 HSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSW 337
+ G V V++ KG GFV+++ A+A +IQ N T + +++ SW
Sbjct: 243 EAFGELVY--VKIPAGKGCGFVQFTRRADAEASIQALNGTM---MGASRVRLSW 291
>gi|440636370|gb|ELR06289.1| hypothetical protein, variant [Geomyces destructans 20631-21]
gi|440636371|gb|ELR06290.1| hypothetical protein GMDG_07882 [Geomyces destructans 20631-21]
Length = 411
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 98/303 (32%), Positives = 150/303 (49%), Gaps = 29/303 (9%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS----YGFIHYFDRRSAAMAILS 113
++++G + + E ++ V+ G K+IR DK S Y FI + +AA A LS
Sbjct: 76 TLWMGELEPWIDENFVRSVWFGMGEQVNVKMIR-DKFSGNAGYCFIDFTTPEAAAKA-LS 133
Query: 114 LNGRHL--FGQPIKVNWAYASG---QREDTSGHFNIFVGDLSPEVTDATLFACF-SVYPS 167
LNG + +P K+NWA G +R+D F+IFVGDL PEV + L + F S +PS
Sbjct: 134 LNGSMIPNTSRPFKLNWASGGGLADRRDDRGPEFSIFVGDLGPEVNEYVLVSLFQSRFPS 193
Query: 168 CSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT-KGAGNNE 226
C A++M D +G SRG+GFV F ++ D Q A+ ++ G + G+R +R + AT K
Sbjct: 194 CKSAKIMTDPISGMSRGYGFVRFSDEGDQQRALTEMQGVYCGNRPMRISTATPKNKSGGG 253
Query: 227 DKQSSDAKSVVELTNGSSEDGKETTNTE------APE-----NNPQYTTVYVGNLAPEVT 275
+ G+ G + AP+ +P TTV+VG L+ VT
Sbjct: 254 GPPGAMGGMPGAPMGGNMAPGMYSMGAPPIGYYGAPQPMNQFTDPNNTTVFVGGLSGYVT 313
Query: 276 QLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKC 335
+ +L F G G I V++ KG GFV++ A +AI N Q + +++
Sbjct: 314 EDELRSFFQ--GFGEITYVKIPPGKGCGFVQFVQRHAAEMAI---NQMQGYPIGNSRVRL 368
Query: 336 SWG 338
SWG
Sbjct: 369 SWG 371
>gi|194746386|ref|XP_001955661.1| GF18875 [Drosophila ananassae]
gi|190628698|gb|EDV44222.1| GF18875 [Drosophila ananassae]
Length = 495
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 80/207 (38%), Positives = 114/207 (55%), Gaps = 25/207 (12%)
Query: 141 HFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAI 200
F+IFVGDLS E+ L F+ + SD RV+ D +T +S+G+GFVSF + +A+SAI
Sbjct: 163 QFHIFVGDLSSEIETQQLREAFTPFGEISDCRVVRDPQTLKSKGYGFVSFIKKSEAESAI 222
Query: 201 NDLTGKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNP 260
+ G+WLGSR IR NWAT+ K + +++ LT E N +P N
Sbjct: 223 TAMNGQWLGSRSIRTNWATR-------KPPASKENIKPLTF------DEVYNQSSPSN-- 267
Query: 261 QYTTVYVGNLAPEVTQLD---LHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAI 317
TVYVG + +T L L + F GA I+E+RV +DKG+ FVR+ST A AI
Sbjct: 268 --CTVYVGGVNSALTALSEEVLQKTFAPYGA--IQEIRVFKDKGYAFVRFSTKEAATHAI 323
Query: 318 QMGNTTQSSYLFGKQMKCSWGSKPTPP 344
+ T+ + + +KCSWG + P
Sbjct: 324 VGVHNTE---INAQPVKCSWGKESGDP 347
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/194 (21%), Positives = 93/194 (47%), Gaps = 29/194 (14%)
Query: 59 VYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKS----SYGFIHYFDRRSAAMAILSL 114
++VG++ +++ L+E F+ G + C+++R ++ YGF+ + + A AI ++
Sbjct: 166 IFVGDLSSEIETQQLREAFTPFGEISDCRVVRDPQTLKSKGYGFVSFIKKSEAESAITAM 225
Query: 115 NGRHLFGQPIKVNWA---------------YASGQREDTSGHFNIFVGDLSPEVT---DA 156
NG+ L + I+ NWA + + + + ++VG ++ +T +
Sbjct: 226 NGQWLGSRSIRTNWATRKPPASKENIKPLTFDEVYNQSSPSNCTVYVGGVNSALTALSEE 285
Query: 157 TLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCN 216
L F+ Y + + RV D +G+ FV F ++ A AI + + ++ ++C+
Sbjct: 286 VLQKTFAPYGAIQEIRVFKD------KGYAFVRFSTKEAATHAIVGVHNTEINAQPVKCS 339
Query: 217 WATKGAGNNEDKQS 230
W K +G+ + Q+
Sbjct: 340 WG-KESGDPNNAQT 352
>gi|430812963|emb|CCJ29641.1| unnamed protein product [Pneumocystis jirovecii]
Length = 853
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 99/295 (33%), Positives = 150/295 (50%), Gaps = 30/295 (10%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS-----YGFIHYFDRRSAAMAIL 112
++++G + V E +++V+ + G K+IR DK S Y F+ F +AA L
Sbjct: 68 ALWMGELEPWVDEAFIRQVWFNLGEQVNVKMIR-DKFSGSNAGYCFVD-FSSTAAASKAL 125
Query: 113 SLNGRHLFG--QPIKVNWAYASG---QREDTSGHFNIFVGDLSPEVTDATLFACF-SVYP 166
SLNG + G + K+NWA G +++D F+IFVGDL PEV + L + F S YP
Sbjct: 126 SLNGTIIPGTTRLFKLNWASGGGLTDRKDDREPEFSIFVGDLGPEVNEYLLVSLFQSRYP 185
Query: 167 SCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNE 226
SC A++M D +G SRG+GFV F ++ D + A+ ++ G + GSR IR + AT
Sbjct: 186 SCKSAKIMTDLVSGMSRGYGFVRFSDEVDQRRALTEMQGVYCGSRPIRISTATP------ 239
Query: 227 DKQSSDAKSVVELTNGSSEDGKETTNTEAPEN---NPQYTTVYVGNLAPEVTQLDLHRHF 283
K + + G S G P N +P TTV+VG L+ VT+ +L F
Sbjct: 240 -KNKPGMSHINMMHMGMSPLGY--YGAPQPMNQFTDPNNTTVFVGGLSSFVTEDELRSFF 296
Query: 284 HSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWG 338
G G I V++ KG GFV++ A +AI + Q + +++ SWG
Sbjct: 297 Q--GFGEITYVKIPPGKGCGFVQFVQRHAAEMAI---SQMQGYPIGNSRVRLSWG 346
>gi|108383479|gb|ABF85732.1| IP09238p [Drosophila melanogaster]
Length = 791
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 79/202 (39%), Positives = 113/202 (55%), Gaps = 25/202 (12%)
Query: 142 FNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAIN 201
F+IFVGDLS E+ L F+ + SD RV+ D +T +S+G+GFVSF + +A+SAI
Sbjct: 452 FHIFVGDLSSEIETQQLREAFTPFGEISDCRVVRDPQTLKSKGYGFVSFIKKSEAESAIT 511
Query: 202 DLTGKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQ 261
+ G+WLGSR IR NWAT+ K + +++ LT E N +P N
Sbjct: 512 AMNGQWLGSRSIRTNWATR-------KPPASKENIKPLTF------DEVYNQSSPSN--- 555
Query: 262 YTTVYVGNLAPEVTQLD---LHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQ 318
TVYVG + +T L L + F GA I+E+RV +DKG+ FVR+ST A AI
Sbjct: 556 -CTVYVGGVNSALTALSEEVLQKTFAPYGA--IQEIRVFKDKGYAFVRFSTKEAATHAIV 612
Query: 319 MGNTTQSSYLFGKQMKCSWGSK 340
+ T+ + + +KCSWG +
Sbjct: 613 GVHNTE---INAQPVKCSWGKE 631
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/194 (21%), Positives = 93/194 (47%), Gaps = 29/194 (14%)
Query: 59 VYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKS----SYGFIHYFDRRSAAMAILSL 114
++VG++ +++ L+E F+ G + C+++R ++ YGF+ + + A AI ++
Sbjct: 454 IFVGDLSSEIETQQLREAFTPFGEISDCRVVRDPQTLKSKGYGFVSFIKKSEAESAITAM 513
Query: 115 NGRHLFGQPIKVNWA---------------YASGQREDTSGHFNIFVGDLSPEVT---DA 156
NG+ L + I+ NWA + + + + ++VG ++ +T +
Sbjct: 514 NGQWLGSRSIRTNWATRKPPASKENIKPLTFDEVYNQSSPSNCTVYVGGVNSALTALSEE 573
Query: 157 TLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCN 216
L F+ Y + + RV D +G+ FV F ++ A AI + + ++ ++C+
Sbjct: 574 VLQKTFAPYGAIQEIRVFKD------KGYAFVRFSTKEAATHAIVGVHNTEINAQPVKCS 627
Query: 217 WATKGAGNNEDKQS 230
W K +G+ + Q+
Sbjct: 628 WG-KESGDPNNAQT 640
>gi|356521983|ref|XP_003529629.1| PREDICTED: RNA-binding post-transcriptional regulator csx1-like
[Glycine max]
Length = 397
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 92/296 (31%), Positives = 148/296 (50%), Gaps = 29/296 (9%)
Query: 56 CRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS----YGFIHYFDRRSAAMAI 111
R++++G++ + E L + TG V K+IR ++S YGFI + R A +
Sbjct: 60 VRTLWIGDLQYWMDENYLYTCLAHTGEVASVKVIRNKQTSQSEGYGFIEFTSRAGAERVL 119
Query: 112 LSLNGRHL--FGQPIKVNWAYASG--QREDTSGHFNIFVGDLSPEVTDATLFACFSV-YP 166
+ NG + GQ ++NWA S +R D S IFVGDL+ +VTD L F YP
Sbjct: 120 QTYNGTIMPNGGQNFRLNWATLSAGERRHDDSPDHTIFVGDLAADVTDYLLQETFRARYP 179
Query: 167 SCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNE 226
S A+V+ D+ TGR++G+GFV F ++ + A+ ++ G +R +R A+ N
Sbjct: 180 SIKGAKVVIDRLTGRTKGYGFVRFGDESEQVRAMTEMQGVLCSTRPMRIGPAS----NKN 235
Query: 227 DKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSL 286
S K+ + G+ E++P TT++VGNL P VT L + F
Sbjct: 236 PSTQSQPKASYQNPQGAQN-----------EHDPNNTTIFVGNLDPNVTDDHLRQVFGHY 284
Query: 287 GAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSKPT 342
G V V++ K GFV+++ + A A+++ N T L G+ ++ SWG P+
Sbjct: 285 GELV--HVKIPAGKRCGFVQFADRSCAEEALRVLNGT---LLGGQNVRLSWGRSPS 335
Score = 46.6 bits (109), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 43/78 (55%), Gaps = 3/78 (3%)
Query: 52 DPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSSYGFIHYFDRRSAAMAI 111
DP+ +++VGN+ VT+ L++VF G + K+ + GF+ + DR A A+
Sbjct: 257 DPNNT-TIFVGNLDPNVTDDHLRQVFGHYGELVHVKIPAGKRC--GFVQFADRSCAEEAL 313
Query: 112 LSLNGRHLFGQPIKVNWA 129
LNG L GQ ++++W
Sbjct: 314 RVLNGTLLGGQNVRLSWG 331
>gi|40253807|dbj|BAD05744.1| putative RNA Binding Protein 45 [Oryza sativa Japonica Group]
gi|40253847|dbj|BAD05783.1| putative RNA Binding Protein 45 [Oryza sativa Japonica Group]
Length = 427
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 87/294 (29%), Positives = 146/294 (49%), Gaps = 31/294 (10%)
Query: 56 CRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS----YGFIHYFDRRSAAMAI 111
R++++G++ + E + F+ TG ++ KLIR ++ YGFI + A +
Sbjct: 94 VRTLWIGDLQYWMDENYISACFAPTGELQSVKLIRDKQTGQLQGYGFIEFTSHAGAERVL 153
Query: 112 LSLNGRHL--FGQPIKVNWAYASGQREDTSGHFNIFVGDLSPEVTDATLFACFSV-YPSC 168
+ NG + Q ++NWA A +R+DT + IFVGDL+ +VTD L F V YPS
Sbjct: 154 QTYNGAMMPNVEQTYRLNWASAGEKRDDTP-DYTIFVGDLAADVTDYILQETFRVHYPSV 212
Query: 169 SDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDK 228
A+V+ D+ T RS+G+GFV F + + A+ ++ G SR +R G +K
Sbjct: 213 KGAKVVTDKMTMRSKGYGFVKFGDPSEQARAMTEMNGMVCSSRPMRI-------GPAANK 265
Query: 229 QSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGA 288
+++ + V G D ++P TT++VG L P VT L + F G
Sbjct: 266 KATGVQEKVPSAQGVQSD-----------SDPSNTTIFVGGLDPSVTDDMLKQVFTPYGD 314
Query: 289 GVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSKPT 342
+ V++ K GFV+++ A A A+ + Q + + G+ ++ SWG P+
Sbjct: 315 --VVHVKIPVGKRCGFVQFANRASADEALVL---LQGTLIGGQNVRLSWGRSPS 363
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 84/185 (45%), Gaps = 25/185 (13%)
Query: 52 DPSTCRSVYVGNIHTQVTEPLLQEVFSSTGP-VEGCKLIRKDKS----SYGFIHYFDRRS 106
D + +++VG++ VT+ +LQE F P V+G K++ + YGF+ + D
Sbjct: 180 DDTPDYTIFVGDLAADVTDYILQETFRVHYPSVKGAKVVTDKMTMRSKGYGFVKFGDPSE 239
Query: 107 AAMAILSLNGRHLFGQPIKVNWAY-------------ASGQREDTS-GHFNIFVGDLSPE 152
A A+ +NG +P+++ A A G + D+ + IFVG L P
Sbjct: 240 QARAMTEMNGMVCSSRPMRIGPAANKKATGVQEKVPSAQGVQSDSDPSNTTIFVGGLDPS 299
Query: 153 VTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQ 212
VTD L F+ Y ++ ++ G FV F N+ A A+ L G +G +
Sbjct: 300 VTDDMLKQVFTPYGDVVHVKIPVGKRCG------FVQFANRASADEALVLLQGTLIGGQN 353
Query: 213 IRCNW 217
+R +W
Sbjct: 354 VRLSW 358
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 48/85 (56%), Gaps = 3/85 (3%)
Query: 52 DPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSSYGFIHYFDRRSAAMAI 111
DPS +++VG + VT+ +L++VF+ G V K+ + GF+ + +R SA A+
Sbjct: 285 DPSNT-TIFVGGLDPSVTDDMLKQVFTPYGDVVHVKIPVGKRC--GFVQFANRASADEAL 341
Query: 112 LSLNGRHLFGQPIKVNWAYASGQRE 136
+ L G + GQ ++++W + R+
Sbjct: 342 VLLQGTLIGGQNVRLSWGRSPSNRQ 366
>gi|158287021|ref|XP_309081.4| AGAP005292-PA [Anopheles gambiae str. PEST]
gi|157019814|gb|EAA04819.5| AGAP005292-PA [Anopheles gambiae str. PEST]
Length = 394
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 76/207 (36%), Positives = 115/207 (55%), Gaps = 16/207 (7%)
Query: 141 HFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAI 200
H++IFVGDLSPE+ TL F+ + SD RV+ D +T +S+G+GFVSF + +A++AI
Sbjct: 79 HYHIFVGDLSPEIETQTLKEAFAPFGDISDCRVVRDPQTLKSKGYGFVSFVKKTEAENAI 138
Query: 201 NDLTGKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNP 260
+ G+WLGSR IR NWAT+ ++++ ++ + E+ N SS P N
Sbjct: 139 AAMNGQWLGSRSIRTNWATRKPPASKNEINAKPLTFDEVYNQSS-----------PTNCT 187
Query: 261 QYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMG 320
Y G LA + + L + F G I+E+RV +DKG+ FVR+ST A AI
Sbjct: 188 VYCGGIGGTLAGGLNEDILQKTFSPF--GTIQEIRVFKDKGYAFVRFSTKEAATHAI--- 242
Query: 321 NTTQSSYLFGKQMKCSWGSKPTPPGTS 347
+S + + +KCSWG + P +
Sbjct: 243 VAVHNSEINSQTVKCSWGKESGDPNNA 269
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 91/205 (44%), Gaps = 36/205 (17%)
Query: 59 VYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKS----SYGFIHYFDRRSAAMAILSL 114
++VG++ ++ L+E F+ G + C+++R ++ YGF+ + + A AI ++
Sbjct: 82 IFVGDLSPEIETQTLKEAFAPFGDISDCRVVRDPQTLKSKGYGFVSFVKKTEAENAIAAM 141
Query: 115 NGRHLFGQPIKVNWAYAS--GQREDTSGH---FNIFVGDLSPEVTDATLFA--------- 160
NG+ L + I+ NWA + + + F+ SP T+ T++
Sbjct: 142 NGQWLGSRSIRTNWATRKPPASKNEINAKPLTFDEVYNQSSP--TNCTVYCGGIGGTLAG 199
Query: 161 ---------CFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSR 211
FS + + + RV D +G+ FV F ++ A AI + + S+
Sbjct: 200 GLNEDILQKTFSPFGTIQEIRVFKD------KGYAFVRFSTKEAATHAIVAVHNSEINSQ 253
Query: 212 QIRCNWATK-GAGNNEDKQSSDAKS 235
++C+W + G NN +S A S
Sbjct: 254 TVKCSWGKESGDPNNAPSLASQALS 278
>gi|224078632|ref|XP_002305583.1| predicted protein [Populus trichocarpa]
gi|222848547|gb|EEE86094.1| predicted protein [Populus trichocarpa]
Length = 382
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 89/297 (29%), Positives = 149/297 (50%), Gaps = 32/297 (10%)
Query: 56 CRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS----YGFIHYFDRRSAAMAI 111
R++++G++ + E + F+ TG V K+IR ++S YGFI +A +
Sbjct: 49 VRTLWIGDLQYWMDENYIASCFAHTGEVASVKIIRNKQTSQIEGYGFIEMTSHGAAERIL 108
Query: 112 LSLNGRHLFG--QPIKVNWA-YASGQREDTSGHFNIFVGDLSPEVTDATLFACFSV-YPS 167
+ NG + Q ++NWA ++ G + D S F IFVGDL+ +VTD L F +PS
Sbjct: 109 QTYNGTPMPNGEQNFRLNWASFSGGDKRDDSPDFTIFVGDLAADVTDFMLQETFRAHFPS 168
Query: 168 CSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNED 227
A+V+ D+ TGR++G+GFV F ++ + A+ ++ G + +R +R A
Sbjct: 169 VKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGAFCSTRPMRVGLA--------- 219
Query: 228 KQSSDAKSVVELTNGSSEDGKETTNTEAPEN--NPQYTTVYVGNLAPEVTQLDLHRHFHS 285
S+ K+VV + K + P+N +P TT++VGNL V L F
Sbjct: 220 ---SNKKAVV-----GQQYPKASYQNPQPQNDGDPNNTTIFVGNLDSNVMDDHLKELFGQ 271
Query: 286 LGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSKPT 342
G + V++ K GFV+++ + A A++M N Q L G+ ++ SWG P+
Sbjct: 272 YGQ--LLHVKIPAGKRCGFVQFADRSSAEEALKMLNGAQ---LSGQNIRLSWGRNPS 323
>gi|125548504|gb|EAY94326.1| hypothetical protein OsI_16094 [Oryza sativa Indica Group]
Length = 426
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 95/312 (30%), Positives = 156/312 (50%), Gaps = 39/312 (12%)
Query: 41 PIPSGNLPPGFDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS----Y 96
P P+G+ G + + ++++VG++ + E L F +G V K+IR ++ Y
Sbjct: 90 PAPAGSGGNGCEEN--KTIWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRQTGQSEGY 147
Query: 97 GFIHYFDRRSAAMAILSLNGRHL--FGQPIKVNWA-YASGQ-REDTSGHFNIFVGDLSPE 152
GF+ ++ SA A+ + G + +P K+NWA Y+ G+ R + + ++IFVGDL+ +
Sbjct: 148 GFVEFYSHGSAEKALQNFTGHVMPNTDRPFKLNWASYSMGEKRSEVASDYSIFVGDLAAD 207
Query: 153 VTDATLFACFS-VYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSR 211
VTD L F+ Y S A+V+ D TGRSRG+GFV F + D A+ ++ G + +R
Sbjct: 208 VTDEMLMELFANKYRSVKGAKVIIDANTGRSRGYGFVRFGDDNDKSHAMTEMNGAYCSTR 267
Query: 212 QIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLA 271
IR AT + + S+ S DG T TVYVG L
Sbjct: 268 PIRIGPATPRRSSGDSGSSTPGHS----------DGDSTNR-----------TVYVGGLD 306
Query: 272 PEVTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGK 331
P V++ +L + F G + V++ K GFV++ + +A A+Q N + + GK
Sbjct: 307 PNVSEDELRKAFAKYGD--VASVKIPLGKQCGFVQFVSRTDAEEALQGLNGS----VIGK 360
Query: 332 Q-MKCSWGSKPT 342
Q ++ SWG P+
Sbjct: 361 QAVRLSWGRSPS 372
>gi|116310076|emb|CAH67097.1| H0818E04.14 [Oryza sativa Indica Group]
Length = 426
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 95/312 (30%), Positives = 156/312 (50%), Gaps = 39/312 (12%)
Query: 41 PIPSGNLPPGFDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS----Y 96
P P+G+ G + + ++++VG++ + E L F +G V K+IR ++ Y
Sbjct: 90 PAPAGSGGNGCEEN--KTIWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRQTGQSEGY 147
Query: 97 GFIHYFDRRSAAMAILSLNGRHL--FGQPIKVNWA-YASGQ-REDTSGHFNIFVGDLSPE 152
GF+ ++ SA A+ + G + +P K+NWA Y+ G+ R + + ++IFVGDL+ +
Sbjct: 148 GFVEFYSHGSAEKALQNFTGHVMPNTDRPFKLNWASYSMGEKRSEVASDYSIFVGDLAAD 207
Query: 153 VTDATLFACFS-VYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSR 211
VTD L F+ Y S A+V+ D TGRSRG+GFV F + D A+ ++ G + +R
Sbjct: 208 VTDEMLMELFANKYRSVKGAKVIIDANTGRSRGYGFVRFGDDNDKSHAMTEMNGAYCSTR 267
Query: 212 QIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLA 271
IR AT + + S+ S DG T TVYVG L
Sbjct: 268 PIRIGPATPRRSSGDSGSSTPGHS----------DGDSTNR-----------TVYVGGLD 306
Query: 272 PEVTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGK 331
P V++ +L + F G + V++ K GFV++ + +A A+Q N + + GK
Sbjct: 307 PNVSEDELRKAFAKYGD--VASVKIPLGKQCGFVQFVSRTDAEEALQGLNGS----VIGK 360
Query: 332 Q-MKCSWGSKPT 342
Q ++ SWG P+
Sbjct: 361 QAVRLSWGRSPS 372
>gi|442621493|ref|NP_001163754.2| CG34362, isoform D, partial [Drosophila melanogaster]
gi|440217977|gb|ACZ95048.2| CG34362, isoform D, partial [Drosophila melanogaster]
Length = 799
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 79/202 (39%), Positives = 113/202 (55%), Gaps = 25/202 (12%)
Query: 142 FNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAIN 201
F+IFVGDLS E+ L F+ + SD RV+ D +T +S+G+GFVSF + +A+SAI
Sbjct: 460 FHIFVGDLSSEIETQQLREAFTPFGEISDCRVVRDPQTLKSKGYGFVSFIKKSEAESAIT 519
Query: 202 DLTGKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQ 261
+ G+WLGSR IR NWAT+ K + +++ LT E N +P N
Sbjct: 520 AMNGQWLGSRSIRTNWATR-------KPPASKENIKPLT------FDEVYNQSSPSN--- 563
Query: 262 YTTVYVGNLAPEVTQLD---LHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQ 318
TVYVG + +T L L + F GA I+E+RV +DKG+ FVR+ST A AI
Sbjct: 564 -CTVYVGGVNSALTALSEEVLQKTFAPYGA--IQEIRVFKDKGYAFVRFSTKEAATHAIV 620
Query: 319 MGNTTQSSYLFGKQMKCSWGSK 340
+ T+ + + +KCSWG +
Sbjct: 621 GVHNTE---INAQPVKCSWGKE 639
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/194 (21%), Positives = 93/194 (47%), Gaps = 29/194 (14%)
Query: 59 VYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKS----SYGFIHYFDRRSAAMAILSL 114
++VG++ +++ L+E F+ G + C+++R ++ YGF+ + + A AI ++
Sbjct: 462 IFVGDLSSEIETQQLREAFTPFGEISDCRVVRDPQTLKSKGYGFVSFIKKSEAESAITAM 521
Query: 115 NGRHLFGQPIKVNWA---------------YASGQREDTSGHFNIFVGDLSPEVT---DA 156
NG+ L + I+ NWA + + + + ++VG ++ +T +
Sbjct: 522 NGQWLGSRSIRTNWATRKPPASKENIKPLTFDEVYNQSSPSNCTVYVGGVNSALTALSEE 581
Query: 157 TLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCN 216
L F+ Y + + RV D +G+ FV F ++ A AI + + ++ ++C+
Sbjct: 582 VLQKTFAPYGAIQEIRVFKD------KGYAFVRFSTKEAATHAIVGVHNTEINAQPVKCS 635
Query: 217 WATKGAGNNEDKQS 230
W K +G+ + Q+
Sbjct: 636 WG-KESGDPNNAQT 648
>gi|24650782|ref|NP_651609.1| CG34362, isoform A [Drosophila melanogaster]
gi|21464374|gb|AAM51990.1| RE10833p [Drosophila melanogaster]
gi|23172487|gb|AAF56774.2| CG34362, isoform A [Drosophila melanogaster]
gi|220947934|gb|ACL86510.1| CG34362-PA [synthetic construct]
gi|220957166|gb|ACL91126.1| CG34362-PA [synthetic construct]
Length = 505
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 80/207 (38%), Positives = 114/207 (55%), Gaps = 25/207 (12%)
Query: 141 HFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAI 200
F+IFVGDLS E+ L F+ + SD RV+ D +T +S+G+GFVSF + +A+SAI
Sbjct: 165 QFHIFVGDLSSEIETQQLREAFTPFGEISDCRVVRDPQTLKSKGYGFVSFIKKSEAESAI 224
Query: 201 NDLTGKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNP 260
+ G+WLGSR IR NWAT+ K + +++ LT E N +P N
Sbjct: 225 TAMNGQWLGSRSIRTNWATR-------KPPASKENIKPLTF------DEVYNQSSPSN-- 269
Query: 261 QYTTVYVGNLAPEVTQLD---LHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAI 317
TVYVG + +T L L + F GA I+E+RV +DKG+ FVR+ST A AI
Sbjct: 270 --CTVYVGGVNSALTALSEEVLQKTFAPYGA--IQEIRVFKDKGYAFVRFSTKEAATHAI 325
Query: 318 QMGNTTQSSYLFGKQMKCSWGSKPTPP 344
+ T+ + + +KCSWG + P
Sbjct: 326 VGVHNTE---INAQPVKCSWGKESGDP 349
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/194 (21%), Positives = 93/194 (47%), Gaps = 29/194 (14%)
Query: 59 VYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKS----SYGFIHYFDRRSAAMAILSL 114
++VG++ +++ L+E F+ G + C+++R ++ YGF+ + + A AI ++
Sbjct: 168 IFVGDLSSEIETQQLREAFTPFGEISDCRVVRDPQTLKSKGYGFVSFIKKSEAESAITAM 227
Query: 115 NGRHLFGQPIKVNWA---------------YASGQREDTSGHFNIFVGDLSPEVT---DA 156
NG+ L + I+ NWA + + + + ++VG ++ +T +
Sbjct: 228 NGQWLGSRSIRTNWATRKPPASKENIKPLTFDEVYNQSSPSNCTVYVGGVNSALTALSEE 287
Query: 157 TLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCN 216
L F+ Y + + RV D +G+ FV F ++ A AI + + ++ ++C+
Sbjct: 288 VLQKTFAPYGAIQEIRVFKD------KGYAFVRFSTKEAATHAIVGVHNTEINAQPVKCS 341
Query: 217 WATKGAGNNEDKQS 230
W K +G+ + Q+
Sbjct: 342 WG-KESGDPNNAQT 354
>gi|301107790|ref|XP_002902977.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262098095|gb|EEY56147.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 382
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 95/280 (33%), Positives = 147/280 (52%), Gaps = 43/280 (15%)
Query: 54 STCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDK-----SSYGFIHYFDRRSAA 108
+ C+++++G+I E + +FSS KLIR DK + YGF+ + ++ A
Sbjct: 3 TECKTLWMGDIQMHWDEAFITSLFSSAAEQPVVKLIR-DKVTGYPAGYGFLEFPTQQGAQ 61
Query: 109 MAILSLNGR------HLFGQPIKVNWAYASGQREDTSGHFNIFVGDLSPEVTDATLFACF 162
+ +LNG+ H F ++NW A G+R +TS +IFVGDL+P+VTD L A F
Sbjct: 62 QVLETLNGQLIPNTMHRF----RMNWG-AGGRRIETSDDHSIFVGDLAPDVTDELLLATF 116
Query: 163 SV-YPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKG 221
+ + + A+V+ D T S+GFGFV F ++++A A+ + G + SR +R + AT+
Sbjct: 117 NARFTTVRGAKVVMDPVTRMSKGFGFVRFGSKEEADQALQTMNGVYCSSRPMRVSVATE- 175
Query: 222 AGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHR 281
N+ +Q V T G +E TN TTV+VG L P T+ +L
Sbjct: 176 --RNKSRQQ------VGFTMGE----EEGTN----------TTVFVGGLDPATTEDELRA 213
Query: 282 HFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGN 321
F +LGA I V+V +G GFV+YS+ A +AI N
Sbjct: 214 RFGALGA--IVSVKVPPGRGCGFVQYSSKEAAEVAISQMN 251
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 81/172 (47%), Gaps = 24/172 (13%)
Query: 51 FDPSTCRSVYVGNIHTQVTEPLLQEVFSST-GPVEGCKLI----RKDKSSYGFIHYFDRR 105
+ S S++VG++ VT+ LL F++ V G K++ + +GF+ + +
Sbjct: 90 IETSDDHSIFVGDLAPDVTDELLLATFNARFTTVRGAKVVMDPVTRMSKGFGFVRFGSKE 149
Query: 106 SAAMAILSLNGRHLFGQPIKVNWA-----------YASGQREDTSGHFNIFVGDLSPEVT 154
A A+ ++NG + +P++V+ A + G+ E T + +FVG L P T
Sbjct: 150 EADQALQTMNGVYCSSRPMRVSVATERNKSRQQVGFTMGEEEGT--NTTVFVGGLDPATT 207
Query: 155 DATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGK 206
+ L A F + +V RG GFV + +++ A+ AI+ + G+
Sbjct: 208 EDELRARFGALGAIVSVKVP------PGRGCGFVQYSSKEAAEVAISQMNGQ 253
>gi|195503598|ref|XP_002098718.1| GE23777 [Drosophila yakuba]
gi|194184819|gb|EDW98430.1| GE23777 [Drosophila yakuba]
Length = 543
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 81/209 (38%), Positives = 115/209 (55%), Gaps = 25/209 (11%)
Query: 139 SGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQS 198
S F+IFVGDLS E+ L F+ + SD RV+ D +T +S+G+GFVSF + +A+S
Sbjct: 208 SEQFHIFVGDLSSEIETQQLREAFTPFGEISDCRVVRDPQTLKSKGYGFVSFIKKSEAES 267
Query: 199 AINDLTGKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPEN 258
AI + G+WLGSR IR NWAT+ K + +++ LT E N +P N
Sbjct: 268 AITAMNGQWLGSRSIRTNWATR-------KPPASKENIKPLTF------DEVYNQSSPSN 314
Query: 259 NPQYTTVYVGNLAPEVTQLD---LHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAAL 315
TVYVG + +T L L + F GA I+E+RV +DKG+ FVR+ST A
Sbjct: 315 ----CTVYVGGVNSALTALSEEVLQKTFAPYGA--IQEIRVFKDKGYAFVRFSTKEAATH 368
Query: 316 AIQMGNTTQSSYLFGKQMKCSWGSKPTPP 344
AI + T+ + + +KCSWG + P
Sbjct: 369 AIVGVHNTE---INAQPVKCSWGKESGDP 394
>gi|215765810|dbj|BAG87507.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 345
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 93/297 (31%), Positives = 143/297 (48%), Gaps = 40/297 (13%)
Query: 57 RSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS----YGFIHYFDRRSAAMAIL 112
++++VG++H + E L F TG V K+IR ++ YGF+ ++ +A +
Sbjct: 19 KTIWVGDLHYWMDENYLHSCFGYTGEVVAIKVIRNKQTGQSEGYGFVEFYSHAAAEKVLE 78
Query: 113 SLNGRHLF---GQPIKVNWAYAS--GQREDTSGHFNIFVGDLSPEVTDATLFACFSV-YP 166
G H+ QP ++NWA S +R D + +IFVGDL+ +V D TL FS Y
Sbjct: 79 GFAG-HIMPNTDQPFRINWASFSMGDRRSDIASDHSIFVGDLASDVNDTTLLETFSKRYS 137
Query: 167 SCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT-KGAGNN 225
S A+V+ D TGRS+G+GFV F + + A+ ++ G + +R +R AT +
Sbjct: 138 SVKGAKVVIDANTGRSKGYGFVRFGDDNEKTHAMTEMNGVYCSTRPMRIGPATPRKTSGT 197
Query: 226 EDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHS 285
S A+S +LTN TTV+VG L P V++ DL + F
Sbjct: 198 SGPTGSAARSDGDLTN---------------------TTVFVGGLDPNVSEDDLRQTFSQ 236
Query: 286 LGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQ-MKCSWGSKP 341
G I V++ K GFV++ A A+Q N + GKQ ++ SWG P
Sbjct: 237 YGE--ISSVKIPVGKQCGFVQFVQRKNAEDALQGLNGS----TIGKQTVRLSWGRNP 287
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 84/184 (45%), Gaps = 23/184 (12%)
Query: 52 DPSTCRSVYVGNIHTQVTEPLLQEVFSST-GPVEGCKLIRKDKSS----YGFIHYFDRRS 106
D ++ S++VG++ + V + L E FS V+G K++ + YGF+ + D
Sbjct: 107 DIASDHSIFVGDLASDVNDTTLLETFSKRYSSVKGAKVVIDANTGRSKGYGFVRFGDDNE 166
Query: 107 AAMAILSLNGRHLFGQPIKVNWAY-----------ASGQREDTS-GHFNIFVGDLSPEVT 154
A+ +NG + +P+++ A S R D + +FVG L P V+
Sbjct: 167 KTHAMTEMNGVYCSTRPMRIGPATPRKTSGTSGPTGSAARSDGDLTNTTVFVGGLDPNVS 226
Query: 155 DATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIR 214
+ L FS Y S ++ ++ G FV F +++A+ A+ L G +G + +R
Sbjct: 227 EDDLRQTFSQYGEISSVKIPVGKQCG------FVQFVQRKNAEDALQGLNGSTIGKQTVR 280
Query: 215 CNWA 218
+W
Sbjct: 281 LSWG 284
>gi|378727642|gb|EHY54101.1| nucleolin [Exophiala dermatitidis NIH/UT8656]
Length = 398
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 106/338 (31%), Positives = 162/338 (47%), Gaps = 40/338 (11%)
Query: 24 QQQSLYH---PGLLAAPQIEPIPSGNLPPGFDPSTCRSVYVGNIHTQVTEPLLQEVFSST 80
QQQ + P + AAPQ PG ++++G + + E ++ ++
Sbjct: 38 QQQMAFQSPDPNVNAAPQ----------PGSGGEQKTTLWMGELEPWIDENFVRNLWFQM 87
Query: 81 GPVEGCKLIRKDKSS-----YGFIHYFDRRSAAMAILSLNGRHLFG--QPIKVNWAYASG 133
G K+IR DK S Y F+ + ++AA A L L+G+ + +P K+NWA G
Sbjct: 88 GEQVSVKMIR-DKFSGSNAGYCFVDFSSPQAAAKA-LQLSGQPMPNSTRPFKLNWATGGG 145
Query: 134 ---QREDTSGHFNIFVGDLSPEVTDATLFACF-SVYPSCSDARVMWDQKTGRSRGFGFVS 189
+R+D ++IFVGDL PEV + L + F S +PSC A++M D +G SRG+GFV
Sbjct: 146 LADRRDDRGPEYSIFVGDLGPEVNEYVLVSLFQSRFPSCKSAKIMTDPLSGMSRGYGFVR 205
Query: 190 FRNQQDAQSAINDLTGKWLGSRQIRCNWAT---KGA---GNNEDKQSSDAKSVVELTNGS 243
F ++ D Q A+ ++ G + G+R +R + AT KG G N G
Sbjct: 206 FSDEGDQQRALTEMQGVYCGNRPMRISTATPKNKGLPMQGANMGMPGPAGPMGYPPMGGP 265
Query: 244 SEDGKETTNTEAPEN---NPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDK 300
T P N +P TTV+VG L+ VT+ +L F G G I V++ K
Sbjct: 266 PMPYYGQQQTPQPMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQ--GFGEITYVKIPPGK 323
Query: 301 GFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWG 338
G GFV++ A +AI N Q + +++ SWG
Sbjct: 324 GCGFVQFVQRHAAEMAI---NQMQGYPIGNSRVRLSWG 358
>gi|442621490|ref|NP_001097951.2| CG34362, isoform B, partial [Drosophila melanogaster]
gi|440217976|gb|AAF56772.4| CG34362, isoform B, partial [Drosophila melanogaster]
Length = 792
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 79/202 (39%), Positives = 113/202 (55%), Gaps = 25/202 (12%)
Query: 142 FNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAIN 201
F+IFVGDLS E+ L F+ + SD RV+ D +T +S+G+GFVSF + +A+SAI
Sbjct: 460 FHIFVGDLSSEIETQQLREAFTPFGEISDCRVVRDPQTLKSKGYGFVSFIKKSEAESAIT 519
Query: 202 DLTGKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQ 261
+ G+WLGSR IR NWAT+ K + +++ LT E N +P N
Sbjct: 520 AMNGQWLGSRSIRTNWATR-------KPPASKENIKPLTF------DEVYNQSSPSN--- 563
Query: 262 YTTVYVGNLAPEVTQLD---LHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQ 318
TVYVG + +T L L + F GA I+E+RV +DKG+ FVR+ST A AI
Sbjct: 564 -CTVYVGGVNSALTALSEEVLQKTFAPYGA--IQEIRVFKDKGYAFVRFSTKEAATHAIV 620
Query: 319 MGNTTQSSYLFGKQMKCSWGSK 340
+ T+ + + +KCSWG +
Sbjct: 621 GVHNTE---INAQPVKCSWGKE 639
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/194 (21%), Positives = 93/194 (47%), Gaps = 29/194 (14%)
Query: 59 VYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKS----SYGFIHYFDRRSAAMAILSL 114
++VG++ +++ L+E F+ G + C+++R ++ YGF+ + + A AI ++
Sbjct: 462 IFVGDLSSEIETQQLREAFTPFGEISDCRVVRDPQTLKSKGYGFVSFIKKSEAESAITAM 521
Query: 115 NGRHLFGQPIKVNWA---------------YASGQREDTSGHFNIFVGDLSPEVT---DA 156
NG+ L + I+ NWA + + + + ++VG ++ +T +
Sbjct: 522 NGQWLGSRSIRTNWATRKPPASKENIKPLTFDEVYNQSSPSNCTVYVGGVNSALTALSEE 581
Query: 157 TLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCN 216
L F+ Y + + RV D +G+ FV F ++ A AI + + ++ ++C+
Sbjct: 582 VLQKTFAPYGAIQEIRVFKD------KGYAFVRFSTKEAATHAIVGVHNTEINAQPVKCS 635
Query: 217 WATKGAGNNEDKQS 230
W K +G+ + Q+
Sbjct: 636 WG-KESGDPNNAQT 648
>gi|442621497|ref|NP_001263033.1| CG34362, isoform F [Drosophila melanogaster]
gi|440217979|gb|AGB96413.1| CG34362, isoform F [Drosophila melanogaster]
Length = 498
Score = 128 bits (321), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 80/207 (38%), Positives = 114/207 (55%), Gaps = 25/207 (12%)
Query: 141 HFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAI 200
F+IFVGDLS E+ L F+ + SD RV+ D +T +S+G+GFVSF + +A+SAI
Sbjct: 165 QFHIFVGDLSSEIETQQLREAFTPFGEISDCRVVRDPQTLKSKGYGFVSFIKKSEAESAI 224
Query: 201 NDLTGKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNP 260
+ G+WLGSR IR NWAT+ K + +++ LT E N +P N
Sbjct: 225 TAMNGQWLGSRSIRTNWATR-------KPPASKENIKPLTF------DEVYNQSSPSN-- 269
Query: 261 QYTTVYVGNLAPEVTQLD---LHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAI 317
TVYVG + +T L L + F GA I+E+RV +DKG+ FVR+ST A AI
Sbjct: 270 --CTVYVGGVNSALTALSEEVLQKTFAPYGA--IQEIRVFKDKGYAFVRFSTKEAATHAI 325
Query: 318 QMGNTTQSSYLFGKQMKCSWGSKPTPP 344
+ T+ + + +KCSWG + P
Sbjct: 326 VGVHNTE---INAQPVKCSWGKESGDP 349
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/194 (21%), Positives = 93/194 (47%), Gaps = 29/194 (14%)
Query: 59 VYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKS----SYGFIHYFDRRSAAMAILSL 114
++VG++ +++ L+E F+ G + C+++R ++ YGF+ + + A AI ++
Sbjct: 168 IFVGDLSSEIETQQLREAFTPFGEISDCRVVRDPQTLKSKGYGFVSFIKKSEAESAITAM 227
Query: 115 NGRHLFGQPIKVNWA---------------YASGQREDTSGHFNIFVGDLSPEVT---DA 156
NG+ L + I+ NWA + + + + ++VG ++ +T +
Sbjct: 228 NGQWLGSRSIRTNWATRKPPASKENIKPLTFDEVYNQSSPSNCTVYVGGVNSALTALSEE 287
Query: 157 TLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCN 216
L F+ Y + + RV D +G+ FV F ++ A AI + + ++ ++C+
Sbjct: 288 VLQKTFAPYGAIQEIRVFKD------KGYAFVRFSTKEAATHAIVGVHNTEINAQPVKCS 341
Query: 217 WATKGAGNNEDKQS 230
W K +G+ + Q+
Sbjct: 342 WG-KESGDPNNAQT 354
>gi|195574475|ref|XP_002105214.1| GD21364 [Drosophila simulans]
gi|194201141|gb|EDX14717.1| GD21364 [Drosophila simulans]
Length = 496
Score = 128 bits (321), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 80/207 (38%), Positives = 114/207 (55%), Gaps = 25/207 (12%)
Query: 141 HFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAI 200
F+IFVGDLS E+ L F+ + SD RV+ D +T +S+G+GFVSF + +A+SAI
Sbjct: 163 QFHIFVGDLSSEIETQQLREAFTPFGEISDCRVVRDPQTLKSKGYGFVSFIKKSEAESAI 222
Query: 201 NDLTGKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNP 260
+ G+WLGSR IR NWAT+ K + +++ LT E N +P N
Sbjct: 223 TAMNGQWLGSRSIRTNWATR-------KPPASKENIKPLTF------DEVYNQSSPSN-- 267
Query: 261 QYTTVYVGNLAPEVTQLD---LHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAI 317
TVYVG + +T L L + F GA I+E+RV +DKG+ FVR+ST A AI
Sbjct: 268 --CTVYVGGVNSALTALSEEVLQKTFAPYGA--IQEIRVFKDKGYAFVRFSTKEAATHAI 323
Query: 318 QMGNTTQSSYLFGKQMKCSWGSKPTPP 344
+ T+ + + +KCSWG + P
Sbjct: 324 VGVHNTE---INAQPVKCSWGKESGDP 347
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/194 (21%), Positives = 93/194 (47%), Gaps = 29/194 (14%)
Query: 59 VYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKS----SYGFIHYFDRRSAAMAILSL 114
++VG++ +++ L+E F+ G + C+++R ++ YGF+ + + A AI ++
Sbjct: 166 IFVGDLSSEIETQQLREAFTPFGEISDCRVVRDPQTLKSKGYGFVSFIKKSEAESAITAM 225
Query: 115 NGRHLFGQPIKVNWA---------------YASGQREDTSGHFNIFVGDLSPEVT---DA 156
NG+ L + I+ NWA + + + + ++VG ++ +T +
Sbjct: 226 NGQWLGSRSIRTNWATRKPPASKENIKPLTFDEVYNQSSPSNCTVYVGGVNSALTALSEE 285
Query: 157 TLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCN 216
L F+ Y + + RV D +G+ FV F ++ A AI + + ++ ++C+
Sbjct: 286 VLQKTFAPYGAIQEIRVFKD------KGYAFVRFSTKEAATHAIVGVHNTEINAQPVKCS 339
Query: 217 WATKGAGNNEDKQS 230
W K +G+ + Q+
Sbjct: 340 WG-KESGDPNNAQT 352
>gi|194907035|ref|XP_001981474.1| GG11588 [Drosophila erecta]
gi|190656112|gb|EDV53344.1| GG11588 [Drosophila erecta]
Length = 502
Score = 128 bits (321), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 80/207 (38%), Positives = 114/207 (55%), Gaps = 25/207 (12%)
Query: 141 HFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAI 200
F+IFVGDLS E+ L F+ + SD RV+ D +T +S+G+GFVSF + +A+SAI
Sbjct: 169 QFHIFVGDLSSEIETQQLREAFTPFGEISDCRVVRDPQTLKSKGYGFVSFIKKSEAESAI 228
Query: 201 NDLTGKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNP 260
+ G+WLGSR IR NWAT+ K + +++ LT E N +P N
Sbjct: 229 TAMNGQWLGSRSIRTNWATR-------KPPASKENIKPLTF------DEVYNQSSPSN-- 273
Query: 261 QYTTVYVGNLAPEVTQLD---LHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAI 317
TVYVG + +T L L + F GA I+E+RV +DKG+ FVR+ST A AI
Sbjct: 274 --CTVYVGGVNSALTALSEEVLQKTFAPYGA--IQEIRVFKDKGYAFVRFSTKEAATHAI 329
Query: 318 QMGNTTQSSYLFGKQMKCSWGSKPTPP 344
+ T+ + + +KCSWG + P
Sbjct: 330 VGVHNTE---INAQPVKCSWGKESGDP 353
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/194 (21%), Positives = 93/194 (47%), Gaps = 29/194 (14%)
Query: 59 VYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKS----SYGFIHYFDRRSAAMAILSL 114
++VG++ +++ L+E F+ G + C+++R ++ YGF+ + + A AI ++
Sbjct: 172 IFVGDLSSEIETQQLREAFTPFGEISDCRVVRDPQTLKSKGYGFVSFIKKSEAESAITAM 231
Query: 115 NGRHLFGQPIKVNWA---------------YASGQREDTSGHFNIFVGDLSPEVT---DA 156
NG+ L + I+ NWA + + + + ++VG ++ +T +
Sbjct: 232 NGQWLGSRSIRTNWATRKPPASKENIKPLTFDEVYNQSSPSNCTVYVGGVNSALTALSEE 291
Query: 157 TLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCN 216
L F+ Y + + RV D +G+ FV F ++ A AI + + ++ ++C+
Sbjct: 292 VLQKTFAPYGAIQEIRVFKD------KGYAFVRFSTKEAATHAIVGVHNTEINAQPVKCS 345
Query: 217 WATKGAGNNEDKQS 230
W K +G+ + Q+
Sbjct: 346 WG-KESGDPNNAQT 358
>gi|414886904|tpg|DAA62918.1| TPA: hypothetical protein ZEAMMB73_604225 [Zea mays]
Length = 484
Score = 128 bits (321), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 95/307 (30%), Positives = 160/307 (52%), Gaps = 30/307 (9%)
Query: 48 PPGFDPST--CRSVYVGNIHTQVTEPLLQ-EVFSSTGP-VEGCKLIRKDKSS----YGFI 99
P G P + R++++G++ + E L F++ + K+IR ++ YGFI
Sbjct: 103 PYGTTPGSGEVRTLWIGDLQHWMDENYLHYNAFAAVAQQIASVKIIRNKQTGHSEGYGFI 162
Query: 100 HYFDRRSAAMAILSLNGRHL--FGQPIKVNWAYAS--GQREDTSGHFNIFVGDLSPEVTD 155
++ R +A +++ NG+ + K+NWA AS +R D+ IFVGDL+ +VTD
Sbjct: 163 EFYSRAAAEHTLMNFNGQMMPNVEMTFKLNWASASTGDKRGDSGSDRTIFVGDLAHDVTD 222
Query: 156 ATLFACFSV-YPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIR 214
+ L F YPS A V+ D+ TG +GFGFV F + + A+ ++ G L +RQ+R
Sbjct: 223 SMLEDVFRAKYPSVRGANVVVDRMTGWPKGFGFVRFGDLNEQARAMTEMNGMLLSTRQMR 282
Query: 215 CNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEV 274
G +K++ DA+ T+G+ + K ++ EN+P TTV+VG L V
Sbjct: 283 I-------GAAANKKNRDAQQTY-ATDGAYQSSKGNSS----ENDPNNTTVFVGGLDSNV 330
Query: 275 TQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMK 334
+ L + F G I V++ K GFV++++ + A AI+M N +Q + G++++
Sbjct: 331 NEEYLRQIFTPYGE--ISYVKIPVGKHCGFVQFTSRSCAEEAIRMLNGSQ---VGGQKVR 385
Query: 335 CSWGSKP 341
SWG P
Sbjct: 386 LSWGRSP 392
Score = 44.7 bits (104), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 44/85 (51%), Gaps = 3/85 (3%)
Query: 52 DPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSSYGFIHYFDRRSAAMAI 111
DP+ +V+VG + + V E L+++F+ G + K+ GF+ + R A AI
Sbjct: 315 DPNNT-TVFVGGLDSNVNEEYLRQIFTPYGEISYVKIPVGKHC--GFVQFTSRSCAEEAI 371
Query: 112 LSLNGRHLFGQPIKVNWAYASGQRE 136
LNG + GQ ++++W + R+
Sbjct: 372 RMLNGSQVGGQKVRLSWGRSPQNRQ 396
>gi|297602825|ref|NP_001052934.2| Os04g0449900 [Oryza sativa Japonica Group]
gi|255675510|dbj|BAF14848.2| Os04g0449900 [Oryza sativa Japonica Group]
Length = 387
Score = 128 bits (321), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 95/312 (30%), Positives = 156/312 (50%), Gaps = 39/312 (12%)
Query: 41 PIPSGNLPPGFDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS----Y 96
P P+G+ G + + ++++VG++ + E L F +G V K+IR ++ Y
Sbjct: 51 PAPAGSGGNGCEEN--KTIWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRQTGQSEGY 108
Query: 97 GFIHYFDRRSAAMAILSLNGRHL--FGQPIKVNWA-YASGQ-REDTSGHFNIFVGDLSPE 152
GF+ ++ SA A+ + G + +P K+NWA Y+ G+ R + + ++IFVGDL+ +
Sbjct: 109 GFVEFYSHGSAEKALQNFTGHVMPNTDRPFKLNWASYSMGEKRSEVASDYSIFVGDLAAD 168
Query: 153 VTDATLFACFS-VYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSR 211
VTD L F+ Y S A+V+ D TGRSRG+GFV F + D A+ ++ G + +R
Sbjct: 169 VTDEMLMELFANKYRSVKGAKVIIDANTGRSRGYGFVRFGDDNDKSHAMTEMNGAYCSTR 228
Query: 212 QIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLA 271
IR AT + + S+ S DG T TVYVG L
Sbjct: 229 PIRIGPATPRRSSGDSGSSTPGHS----------DGDSTNR-----------TVYVGGLD 267
Query: 272 PEVTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGK 331
P V++ +L + F G + V++ K GFV++ + +A A+Q N + + GK
Sbjct: 268 PNVSEDELRKAFAKYGD--VASVKIPLGKQCGFVQFVSRTDAEEALQGLNGS----VIGK 321
Query: 332 Q-MKCSWGSKPT 342
Q ++ SWG P+
Sbjct: 322 QAVRLSWGRSPS 333
>gi|212722596|ref|NP_001131852.1| uncharacterized protein LOC100193230 [Zea mays]
gi|194692726|gb|ACF80447.1| unknown [Zea mays]
gi|413919585|gb|AFW59517.1| hypothetical protein ZEAMMB73_768040 [Zea mays]
Length = 434
Score = 128 bits (321), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 90/291 (30%), Positives = 149/291 (51%), Gaps = 31/291 (10%)
Query: 56 CRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS-----YGFIHYFDRRSAAMA 110
R++++G++ + + + FS+TG V+ KLIR DK+S YGF+ + R +A
Sbjct: 85 VRTLWIGDLQYWMDDNYVFGCFSNTGEVQNVKLIR-DKNSGQLQGYGFVEFTSRAAAERV 143
Query: 111 ILSLNGRHL--FGQPIKVNWAYASGQREDTSGHFNIFVGDLSPEVTDATLFACFSV-YPS 167
+ + NG+ + ++NWA A +R+DT + IFVGDL+ +VTD L F V YPS
Sbjct: 144 LQTYNGQMMPNVDLTFRLNWASAGEKRDDTP-DYTIFVGDLAADVTDYLLQETFRVHYPS 202
Query: 168 CSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNED 227
A+V+ D+ T R++G+GFV F + + A+ ++ G SR +R A
Sbjct: 203 VKGAKVVTDKLTMRTKGYGFVKFGDPTEQARAMTEMNGMPCSSRPMRIGPAAS------- 255
Query: 228 KQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLG 287
+A VV+ +S+ + EN+P TT++VG L P VT+ L + F G
Sbjct: 256 --RKNAGGVVQERVPNSQGAQS-------ENDPNNTTIFVGGLDPNVTEDVLKQAFSPYG 306
Query: 288 AGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWG 338
+ V++ K GFV++ T A A+ M Q + + + ++ SWG
Sbjct: 307 E--VIHVKIPVGKRCGFVQFVTRPSAEQALLM---LQGALIGAQNVRLSWG 352
>gi|242062048|ref|XP_002452313.1| hypothetical protein SORBIDRAFT_04g023540 [Sorghum bicolor]
gi|241932144|gb|EES05289.1| hypothetical protein SORBIDRAFT_04g023540 [Sorghum bicolor]
Length = 435
Score = 127 bits (320), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 95/295 (32%), Positives = 143/295 (48%), Gaps = 37/295 (12%)
Query: 57 RSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS----YGFIHYFDRRSAAMAIL 112
R+++VG++ + E L F +G V K+IR S YGF+ ++ SA A+
Sbjct: 109 RTIWVGDLQYWMDENYLHSCFGPSGEVVNIKVIRNRHSGVSEGYGFVEFYSHVSAEKALQ 168
Query: 113 SLNGRHL--FGQPIKVNWA-YASGQ-REDTSGHFNIFVGDLSPEVTDATLFACFS-VYPS 167
+ +G + + K+NWA Y+ G+ R + S +IFVGDL+ +VTD L FS Y S
Sbjct: 169 NFSGHVMPNTDRAFKLNWASYSMGEKRTELSSDHSIFVGDLAVDVTDEMLLELFSNKYRS 228
Query: 168 CSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNED 227
A+V+ D TGRSRG+GFV F + D A+ ++ G + +R IR AT +
Sbjct: 229 VKGAKVIIDANTGRSRGYGFVRFGDDNDKTHAMTEMNGVYCSTRPIRVGPATPRRSQGDS 288
Query: 228 KQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLG 287
S +S V+ TN TVYVG L P V++ +L + F G
Sbjct: 289 GSSPPRQSDVDSTN---------------------RTVYVGGLDPNVSEDELRKAFAKYG 327
Query: 288 AGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQ-MKCSWGSKP 341
+ V++ K GFV++ A+A A+Q N GKQ ++ SWG P
Sbjct: 328 D--LASVKIPFGKQCGFVQFVNRADAEEALQGLNGA----TIGKQAVRLSWGRSP 376
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 88/181 (48%), Gaps = 22/181 (12%)
Query: 54 STCRSVYVGNIHTQVTEPLLQEVFSST-GPVEGCKLIRKDKSS----YGFIHYFDRRSAA 108
S+ S++VG++ VT+ +L E+FS+ V+G K+I + YGF+ + D
Sbjct: 199 SSDHSIFVGDLAVDVTDEMLLELFSNKYRSVKGAKVIIDANTGRSRGYGFVRFGDDNDKT 258
Query: 109 MAILSLNGRHLFGQPIKVNWAYASGQREDT-----------SGHFNIFVGDLSPEVTDAT 157
A+ +NG + +PI+V A + D+ S + ++VG L P V++
Sbjct: 259 HAMTEMNGVYCSTRPIRVGPATPRRSQGDSGSSPPRQSDVDSTNRTVYVGGLDPNVSEDE 318
Query: 158 LFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNW 217
L F+ Y + ++ + ++ G FV F N+ DA+ A+ L G +G + +R +W
Sbjct: 319 LRKAFAKYGDLASVKIPFGKQCG------FVQFVNRADAEEALQGLNGATIGKQAVRLSW 372
Query: 218 A 218
Sbjct: 373 G 373
>gi|442621495|ref|NP_001263032.1| CG34362, isoform E [Drosophila melanogaster]
gi|440217978|gb|AGB96412.1| CG34362, isoform E [Drosophila melanogaster]
Length = 509
Score = 127 bits (320), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 80/207 (38%), Positives = 114/207 (55%), Gaps = 25/207 (12%)
Query: 141 HFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAI 200
F+IFVGDLS E+ L F+ + SD RV+ D +T +S+G+GFVSF + +A+SAI
Sbjct: 165 QFHIFVGDLSSEIETQQLREAFTPFGEISDCRVVRDPQTLKSKGYGFVSFIKKSEAESAI 224
Query: 201 NDLTGKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNP 260
+ G+WLGSR IR NWAT+ K + +++ LT E N +P N
Sbjct: 225 TAMNGQWLGSRSIRTNWATR-------KPPASKENIKPLTF------DEVYNQSSPSN-- 269
Query: 261 QYTTVYVGNLAPEVTQLD---LHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAI 317
TVYVG + +T L L + F GA I+E+RV +DKG+ FVR+ST A AI
Sbjct: 270 --CTVYVGGVNSALTALSEEVLQKTFAPYGA--IQEIRVFKDKGYAFVRFSTKEAATHAI 325
Query: 318 QMGNTTQSSYLFGKQMKCSWGSKPTPP 344
+ T+ + + +KCSWG + P
Sbjct: 326 VGVHNTE---INAQPVKCSWGKESGDP 349
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/194 (21%), Positives = 93/194 (47%), Gaps = 29/194 (14%)
Query: 59 VYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKS----SYGFIHYFDRRSAAMAILSL 114
++VG++ +++ L+E F+ G + C+++R ++ YGF+ + + A AI ++
Sbjct: 168 IFVGDLSSEIETQQLREAFTPFGEISDCRVVRDPQTLKSKGYGFVSFIKKSEAESAITAM 227
Query: 115 NGRHLFGQPIKVNWA---------------YASGQREDTSGHFNIFVGDLSPEVT---DA 156
NG+ L + I+ NWA + + + + ++VG ++ +T +
Sbjct: 228 NGQWLGSRSIRTNWATRKPPASKENIKPLTFDEVYNQSSPSNCTVYVGGVNSALTALSEE 287
Query: 157 TLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCN 216
L F+ Y + + RV D +G+ FV F ++ A AI + + ++ ++C+
Sbjct: 288 VLQKTFAPYGAIQEIRVFKD------KGYAFVRFSTKEAATHAIVGVHNTEINAQPVKCS 341
Query: 217 WATKGAGNNEDKQS 230
W K +G+ + Q+
Sbjct: 342 WG-KESGDPNNAQT 354
>gi|413919584|gb|AFW59516.1| hypothetical protein ZEAMMB73_768040, partial [Zea mays]
Length = 428
Score = 127 bits (320), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 90/291 (30%), Positives = 149/291 (51%), Gaps = 31/291 (10%)
Query: 56 CRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS-----YGFIHYFDRRSAAMA 110
R++++G++ + + + FS+TG V+ KLIR DK+S YGF+ + R +A
Sbjct: 85 VRTLWIGDLQYWMDDNYVFGCFSNTGEVQNVKLIR-DKNSGQLQGYGFVEFTSRAAAERV 143
Query: 111 ILSLNGRHL--FGQPIKVNWAYASGQREDTSGHFNIFVGDLSPEVTDATLFACFSV-YPS 167
+ + NG+ + ++NWA A +R+DT + IFVGDL+ +VTD L F V YPS
Sbjct: 144 LQTYNGQMMPNVDLTFRLNWASAGEKRDDTP-DYTIFVGDLAADVTDYLLQETFRVHYPS 202
Query: 168 CSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNED 227
A+V+ D+ T R++G+GFV F + + A+ ++ G SR +R A
Sbjct: 203 VKGAKVVTDKLTMRTKGYGFVKFGDPTEQARAMTEMNGMPCSSRPMRIGPAAS------- 255
Query: 228 KQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLG 287
+A VV+ +S+ + EN+P TT++VG L P VT+ L + F G
Sbjct: 256 --RKNAGGVVQERVPNSQGAQS-------ENDPNNTTIFVGGLDPNVTEDVLKQAFSPYG 306
Query: 288 AGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWG 338
+ V++ K GFV++ T A A+ M Q + + + ++ SWG
Sbjct: 307 E--VIHVKIPVGKRCGFVQFVTRPSAEQALLM---LQGALIGAQNVRLSWG 352
>gi|345561228|gb|EGX44324.1| hypothetical protein AOL_s00193g52 [Arthrobotrys oligospora ATCC
24927]
Length = 461
Score = 127 bits (320), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 91/301 (30%), Positives = 151/301 (50%), Gaps = 31/301 (10%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKD---KSSYGFIHYFDRRSAAMAILSL 114
++++G + + E ++ V+ S G K+IR + Y F+ + ++AA A L+L
Sbjct: 59 TLWMGELEPWIDENFIRSVWYSLGEQVNVKMIRDKFNGSAGYCFVDFTSPQAAAKA-LAL 117
Query: 115 NGRHL--FGQPIKVNWAYASG---QREDTSGHFNIFVGDLSPEVTDATLFACF-SVYPSC 168
NG + +P K+NWA G +R+D ++IFVGDL PEV + L + F + SC
Sbjct: 118 NGTQIPNSNRPFKLNWASGGGLADRRDDRGPEYSIFVGDLGPEVNEFVLVSLFQGRFQSC 177
Query: 169 SDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDK 228
A++M D +G SRG+GFV F ++ D Q A+ ++ G + G+R +R + AT ++K
Sbjct: 178 KSAKIMTDPISGMSRGYGFVRFADEMDQQRALTEMQGVYCGNRPMRISTATP-----KNK 232
Query: 229 QSSDAKSVVELTNGSSEDGKETTNTE------APE-----NNPQYTTVYVGNLAPEVTQL 277
+ + + + G T AP+ +P TTV+VG L+ VT+
Sbjct: 233 GGNQGMMQQGMGGMAPQMGMYTMGAPTMGYYGAPQPMNQFTDPNNTTVFVGGLSGYVTED 292
Query: 278 DLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSW 337
+L F G G I V++ KG GFV++ A +AI N Q + +++ SW
Sbjct: 293 ELRSFFQ--GFGEITYVKIPPGKGCGFVQFVQRHAAEMAI---NQMQGYPIGNSRVRLSW 347
Query: 338 G 338
G
Sbjct: 348 G 348
>gi|226491568|ref|NP_001142233.1| uncharacterized protein LOC100274401 [Zea mays]
gi|194707728|gb|ACF87948.1| unknown [Zea mays]
gi|414886903|tpg|DAA62917.1| TPA: hypothetical protein ZEAMMB73_604225 [Zea mays]
Length = 465
Score = 127 bits (320), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 95/307 (30%), Positives = 160/307 (52%), Gaps = 30/307 (9%)
Query: 48 PPGFDPST--CRSVYVGNIHTQVTEPLLQ-EVFSSTGP-VEGCKLIRKDKSS----YGFI 99
P G P + R++++G++ + E L F++ + K+IR ++ YGFI
Sbjct: 103 PYGTTPGSGEVRTLWIGDLQHWMDENYLHYNAFAAVAQQIASVKIIRNKQTGHSEGYGFI 162
Query: 100 HYFDRRSAAMAILSLNGRHL--FGQPIKVNWAYAS--GQREDTSGHFNIFVGDLSPEVTD 155
++ R +A +++ NG+ + K+NWA AS +R D+ IFVGDL+ +VTD
Sbjct: 163 EFYSRAAAEHTLMNFNGQMMPNVEMTFKLNWASASTGDKRGDSGSDRTIFVGDLAHDVTD 222
Query: 156 ATLFACFSV-YPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIR 214
+ L F YPS A V+ D+ TG +GFGFV F + + A+ ++ G L +RQ+R
Sbjct: 223 SMLEDVFRAKYPSVRGANVVVDRMTGWPKGFGFVRFGDLNEQARAMTEMNGMLLSTRQMR 282
Query: 215 CNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEV 274
G +K++ DA+ T+G+ + K ++ EN+P TTV+VG L V
Sbjct: 283 I-------GAAANKKNRDAQQTY-ATDGAYQSSKGNSS----ENDPNNTTVFVGGLDSNV 330
Query: 275 TQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMK 334
+ L + F G I V++ K GFV++++ + A AI+M N +Q + G++++
Sbjct: 331 NEEYLRQIFTPYGE--ISYVKIPVGKHCGFVQFTSRSCAEEAIRMLNGSQ---VGGQKVR 385
Query: 335 CSWGSKP 341
SWG P
Sbjct: 386 LSWGRSP 392
Score = 45.1 bits (105), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 44/85 (51%), Gaps = 3/85 (3%)
Query: 52 DPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSSYGFIHYFDRRSAAMAI 111
DP+ +V+VG + + V E L+++F+ G + K+ GF+ + R A AI
Sbjct: 315 DPNNT-TVFVGGLDSNVNEEYLRQIFTPYGEISYVKIPVGKHC--GFVQFTSRSCAEEAI 371
Query: 112 LSLNGRHLFGQPIKVNWAYASGQRE 136
LNG + GQ ++++W + R+
Sbjct: 372 RMLNGSQVGGQKVRLSWGRSPQNRQ 396
>gi|449673467|ref|XP_002159702.2| PREDICTED: nucleolysin TIAR-like [Hydra magnipapillata]
Length = 352
Score = 127 bits (319), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 84/286 (29%), Positives = 136/286 (47%), Gaps = 35/286 (12%)
Query: 59 VYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIR--------KDKSSYGFIHYFDRRSAAMA 110
+YVGN+ +VT+ ++ + + P K++ + Y F+ + D SA +
Sbjct: 14 LYVGNLDKRVTDTMMINILRTGLPHIKEKVLSASMFPGDMNNPEGYCFVQFEDNISAMQS 73
Query: 111 ILSLNGRHLFGQPIKVNWAYAS--GQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSC 168
+ LNGR G+ +KVNWA S G + +I+ G+L + + L A F V+
Sbjct: 74 MNFLNGREFCGKKVKVNWATNSPNGMPKVIGTSVSIYCGNLDDTIDEEDLKAAFEVFGEI 133
Query: 169 SDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDK 228
+ +V+ D T S+ F+SF N+ DA+ AI ++ G L +R I+ NWAT+ +++
Sbjct: 134 LNIKVVRDPVTNHSKNIAFISFTNKPDAEKAIREMHGAMLKTRAIKTNWATRNQNQKKEE 193
Query: 229 QSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGA 288
Q D E+ G+S D TTVY G + T+ + HF G
Sbjct: 194 QDYD-----EVYKGASADN---------------TTVYAGGIPSNCTEEQIRSHFDDYGK 233
Query: 289 GVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMK 334
I +VR+ K + F+++ THA AA AI N T+ L G +K
Sbjct: 234 --IVDVRIFAAKNYAFIKFDTHANAATAICKSNGTE---LVGSCLK 274
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/170 (21%), Positives = 70/170 (41%), Gaps = 22/170 (12%)
Query: 55 TCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSSY----GFIHYFDRRSAAMA 110
T S+Y GN+ + E L+ F G + K++R +++ FI + ++ A A
Sbjct: 105 TSVSIYCGNLDDTIDEEDLKAAFEVFGEILNIKVVRDPVTNHSKNIAFISFTNKPDAEKA 164
Query: 111 ILSLNGRHLFGQPIKVNWA------------YASGQREDTSGHFNIFVGDLSPEVTDATL 158
I ++G L + IK NWA Y + ++ + ++ G + T+ +
Sbjct: 165 IREMHGAMLKTRAIKTNWATRNQNQKKEEQDYDEVYKGASADNTTVYAGGIPSNCTEEQI 224
Query: 159 FACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWL 208
+ F Y D R+ ++ + F+ F +A +AI G L
Sbjct: 225 RSHFDDYGKIVDVRIF------AAKNYAFIKFDTHANAATAICKSNGTEL 268
>gi|293336608|ref|NP_001168401.1| uncharacterized protein LOC100382170 [Zea mays]
gi|223948043|gb|ACN28105.1| unknown [Zea mays]
gi|414585352|tpg|DAA35923.1| TPA: hypothetical protein ZEAMMB73_028165 [Zea mays]
Length = 432
Score = 127 bits (319), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 90/291 (30%), Positives = 145/291 (49%), Gaps = 31/291 (10%)
Query: 56 CRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS-----YGFIHYFDRRSAAMA 110
R++++G++ + E + FS+TG V+ KLIR DK+S YGF+ + R +A
Sbjct: 91 VRTLWIGDLQYWMDENYVFGCFSNTGEVQNVKLIR-DKNSGQLQGYGFVEFTSRAAAERV 149
Query: 111 ILSLNGRHL--FGQPIKVNWAYASGQREDTSGHFNIFVGDLSPEVTDATLFACFSV-YPS 167
+ + NG+ + ++NWA A +R+DT + IFVGDL+ +VTD L F V YPS
Sbjct: 150 LQTYNGQMMPNVDLTFRLNWASAGEKRDDTP-EYTIFVGDLAADVTDYLLQETFRVHYPS 208
Query: 168 CSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNED 227
A+V+ D+ T R++G+GFV F + + A+ ++ G SR +R A
Sbjct: 209 VKGAKVVTDKLTMRTKGYGFVKFGDPTEQARAMTEMNGMPCSSRPMRIGPAASRKN---- 264
Query: 228 KQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLG 287
T G ++ + EN+P TT++VG L P VT+ L + F G
Sbjct: 265 ------------TGGVVQERVPNSQGAQSENDPNNTTIFVGGLDPNVTEDTLKQVFSPYG 312
Query: 288 AGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWG 338
V V++ K GFV++ T A A+ M Q + + + ++ SWG
Sbjct: 313 EVV--HVKIPVGKRCGFVQFVTRPSAEQALLM---LQGALIGAQNVRLSWG 358
>gi|326495566|dbj|BAJ85879.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 479
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 105/345 (30%), Positives = 159/345 (46%), Gaps = 59/345 (17%)
Query: 57 RSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS----YGFIHYFDRRSAAMAIL 112
++++VG++H + E L F TG V K+IR ++ YGF+ ++ +AA +L
Sbjct: 153 KTIWVGDLHYWMDENYLHTCFGYTGEVVAIKVIRNKQTGQSEGYGFVEFYSH-AAAEKVL 211
Query: 113 SLNGRHLF---GQPIKVNWAYAS--GQREDTSGHFNIFVGDLSPEVTDATLFACFSV-YP 166
H+ QP ++NWA S +R D + +IFVGDL+ +V D L FS Y
Sbjct: 212 DGFAGHIMPNTDQPFRINWASFSMGDRRSDIASDHSIFVGDLASDVNDTALLETFSSRYS 271
Query: 167 SCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT-KGAGNN 225
S A+V+ D TGRS+G+GFV F + + +A+ ++ G + +R +R AT + +
Sbjct: 272 SVKGAKVVIDANTGRSKGYGFVRFGDDSEKTNAMTEMNGVYCSTRPMRIGPATPRKSSGT 331
Query: 226 EDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHS 285
S A+S +LTN TTV+VG L P V++ DL + F
Sbjct: 332 SGSTGSSARSDGDLTN---------------------TTVFVGGLDPNVSEDDLKQTFSQ 370
Query: 286 LGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQ-MKCSWGSKPTPP 344
G I V++ K GFV++ A A+Q N + GKQ ++ SWG P
Sbjct: 371 YGE--ISSVKIPVGKQCGFVQFLQRKNAEDALQGLNGS----TIGKQTVRLSWGRNPANK 424
Query: 345 GTSSN------------PLP-------PPAAAPIPGLSAADLLAY 370
S+ P P P A P PG+ AA AY
Sbjct: 425 QLRSDNGNQWNNGMYYAPSPFYNGYGYPAAPFPDPGMYAAAYGAY 469
>gi|242074396|ref|XP_002447134.1| hypothetical protein SORBIDRAFT_06g029180 [Sorghum bicolor]
gi|241938317|gb|EES11462.1| hypothetical protein SORBIDRAFT_06g029180 [Sorghum bicolor]
Length = 440
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 89/291 (30%), Positives = 144/291 (49%), Gaps = 31/291 (10%)
Query: 56 CRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS-----YGFIHYFDRRSAAMA 110
R++++G++ + E + F STG V+ KLIR DK+S YGF+ + R +A
Sbjct: 91 VRTLWIGDLQYWMDESYVLGCFLSTGEVQNVKLIR-DKNSGQLQGYGFVEFTSRAAAERV 149
Query: 111 ILSLNGRHL--FGQPIKVNWAYASGQREDTSGHFNIFVGDLSPEVTDATLFACFSV-YPS 167
+ + NG+ + ++NWA A +R+DT + IFVGDL+ +VTD L F V YPS
Sbjct: 150 LQTYNGQMMPNVELTFRLNWASAGEKRDDTP-DYTIFVGDLAADVTDYLLQETFRVHYPS 208
Query: 168 CSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNED 227
A+V+ D+ T R++G+GFV F + + A+ ++ G SR +R A
Sbjct: 209 VKGAKVVTDKLTMRTKGYGFVKFGDPTEQARAMTEMNGMPCSSRPMRIGPAASRKN---- 264
Query: 228 KQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLG 287
T G ++ + EN+P TT++VG L P VT+ L + F G
Sbjct: 265 ------------TGGVVQERVPNSQGAQSENDPNNTTIFVGGLDPNVTEDTLKQVFSPYG 312
Query: 288 AGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWG 338
+ V++ K GFV++ T A A+ M Q + + + ++ SWG
Sbjct: 313 E--VVHVKIPVGKRCGFVQFVTRPSAEQALLM---LQGALIGAQNVRLSWG 358
>gi|302142363|emb|CBI19566.3| unnamed protein product [Vitis vinifera]
Length = 324
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 89/284 (31%), Positives = 142/284 (50%), Gaps = 27/284 (9%)
Query: 68 VTEPLLQEVFSSTGPVEGCKLIRKDKSS----YGFIHYFDRRSAAMAILSLNGRHL--FG 121
+ E L F++TG + K+IR ++ YGF+ +F +A + G +
Sbjct: 1 MDENYLHSCFAATGELASMKVIRNKQTGSSEGYGFVEFFSHAAAEKVLQGYAGVLMPNTD 60
Query: 122 QPIKVNWAYAS--GQREDTSGHFNIFVGDLSPEVTDATLFACFS-VYPSCSDARVMWDQK 178
QP ++NWA S +R D +IFVGDL+ +V+D+ L F+ YPS A+V++D
Sbjct: 61 QPFRLNWATFSMGDKRSDNGPDLSIFVGDLASDVSDSLLHETFAGKYPSVKAAKVVFDAN 120
Query: 179 TGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVE 238
TGRS+G+GFV F ++ + A+ ++ G + SR +R AT ++SS +
Sbjct: 121 TGRSKGYGFVRFGDENERSQAMTEMNGVYCSSRPMRIGAATP-------RKSSGYQQQYS 173
Query: 239 LTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQR 298
G + +G + N TT++VG L P V+ DL + F G I V++
Sbjct: 174 SHGGYASNGASVQSDGDSMN----TTIFVGGLDPNVSDEDLRQPFSQYGE--IVSVKIPV 227
Query: 299 DKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQ-MKCSWGSKP 341
KG GFV+++ A A+Q N T + GKQ ++ SWG P
Sbjct: 228 GKGCGFVQFANRNNAEDALQKLNGT----VIGKQTVRLSWGRNP 267
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 86/187 (45%), Gaps = 32/187 (17%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGP-VEGCKLIRKDKSS----YGFIHYFDRRSAAMAIL 112
S++VG++ + V++ LL E F+ P V+ K++ + YGF+ + D + A+
Sbjct: 84 SIFVGDLASDVSDSLLHETFAGKYPSVKAAKVVFDANTGRSKGYGFVRFGDENERSQAMT 143
Query: 113 SLNGRHLFGQPIKVNWA-----------------YASG----QREDTSGHFNIFVGDLSP 151
+NG + +P+++ A YAS Q + S + IFVG L P
Sbjct: 144 EMNGVYCSSRPMRIGAATPRKSSGYQQQYSSHGGYASNGASVQSDGDSMNTTIFVGGLDP 203
Query: 152 EVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSR 211
V+D L FS Y ++ +G GFV F N+ +A+ A+ L G +G +
Sbjct: 204 NVSDEDLRQPFSQYGEIVSVKIP------VGKGCGFVQFANRNNAEDALQKLNGTVIGKQ 257
Query: 212 QIRCNWA 218
+R +W
Sbjct: 258 TVRLSWG 264
>gi|119177688|ref|XP_001240593.1| hypothetical protein CIMG_07756 [Coccidioides immitis RS]
Length = 401
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 93/304 (30%), Positives = 150/304 (49%), Gaps = 34/304 (11%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRK----DKSSYGFIHYFDRRSAAMAILS 113
++++G + + E ++ ++ G K+IR + Y F+ F +AA LS
Sbjct: 67 TLWMGELEPWIDENFIRNIWYQMGEQVNVKMIRDKFSGSNAGYCFVD-FATPAAAAKALS 125
Query: 114 LNGRHL--FGQPIKVNWAYASG----QREDTSGHFNIFVGDLSPEVTDATLFACF-SVYP 166
+NG + +P K+NWA G RED + ++IFVGDL PEV + L + F S +P
Sbjct: 126 VNGTPMPNTNRPFKLNWATGGGLSDRSREDRTPEYSIFVGDLGPEVNEYVLVSLFQSRFP 185
Query: 167 SCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNE 226
SC A++M D +G SRG+GFV F ++ D Q A+ ++ G + G+R +R + AT +
Sbjct: 186 SCKSAKIMTDPISGMSRGYGFVRFSDETDQQRALTEMQGVYCGNRPMRISTATP-----K 240
Query: 227 DKQSSDAKSVVELTNG-------SSEDGKETTNTEAPE-----NNPQYTTVYVGNLAPEV 274
+K S A + + + G AP+ +P TTV+VG L+ V
Sbjct: 241 NKGPSGAPGQMGMPGAPPAGMYPPAMGGPPMGYYGAPQPMNQFTDPNNTTVFVGGLSGYV 300
Query: 275 TQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMK 334
T+ +L F G G I V++ KG GFV++ A +AI N Q + +++
Sbjct: 301 TEDELRSFFQ--GFGEITYVKIPPGKGCGFVQFVQRHAAEMAI---NQMQGYPIGNSRVR 355
Query: 335 CSWG 338
SWG
Sbjct: 356 LSWG 359
>gi|303315831|ref|XP_003067920.1| RNA recognition motif containing protein [Coccidioides posadasii
C735 delta SOWgp]
gi|240107596|gb|EER25775.1| RNA recognition motif containing protein [Coccidioides posadasii
C735 delta SOWgp]
gi|320032017|gb|EFW13973.1| mRNA binding post-transcriptional regulator [Coccidioides posadasii
str. Silveira]
gi|392867443|gb|EAS29326.2| mRNA binding post-transcriptional regulator [Coccidioides immitis
RS]
Length = 400
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 93/304 (30%), Positives = 150/304 (49%), Gaps = 34/304 (11%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRK----DKSSYGFIHYFDRRSAAMAILS 113
++++G + + E ++ ++ G K+IR + Y F+ F +AA LS
Sbjct: 67 TLWMGELEPWIDENFIRNIWYQMGEQVNVKMIRDKFSGSNAGYCFVD-FATPAAAAKALS 125
Query: 114 LNGRHL--FGQPIKVNWAYASG----QREDTSGHFNIFVGDLSPEVTDATLFACF-SVYP 166
+NG + +P K+NWA G RED + ++IFVGDL PEV + L + F S +P
Sbjct: 126 VNGTPMPNTNRPFKLNWATGGGLSDRSREDRTPEYSIFVGDLGPEVNEYVLVSLFQSRFP 185
Query: 167 SCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNE 226
SC A++M D +G SRG+GFV F ++ D Q A+ ++ G + G+R +R + AT +
Sbjct: 186 SCKSAKIMTDPISGMSRGYGFVRFSDETDQQRALTEMQGVYCGNRPMRISTATP-----K 240
Query: 227 DKQSSDAKSVVELTNG-------SSEDGKETTNTEAPE-----NNPQYTTVYVGNLAPEV 274
+K S A + + + G AP+ +P TTV+VG L+ V
Sbjct: 241 NKGPSGAPGQMGMPGAPPAGMYPPAMGGPPMGYYGAPQPMNQFTDPNNTTVFVGGLSGYV 300
Query: 275 TQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMK 334
T+ +L F G G I V++ KG GFV++ A +AI N Q + +++
Sbjct: 301 TEDELRSFFQ--GFGEITYVKIPPGKGCGFVQFVQRHAAEMAI---NQMQGYPIGNSRVR 355
Query: 335 CSWG 338
SWG
Sbjct: 356 LSWG 359
>gi|388508506|gb|AFK42319.1| unknown [Lotus japonicus]
Length = 103
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 75/95 (78%), Positives = 80/95 (84%), Gaps = 7/95 (7%)
Query: 319 MGNTTQSSYLFGKQMKCSWGSKPTPPGTSSNPLPPPAAAPIPGLSAADLLAYERQIAMSK 378
MGNT S L GKQ+KCSWGSKPTPPGT+SNPLPPPA A +PG SA DLLAYERQ+AMSK
Sbjct: 1 MGNT--QSILCGKQIKCSWGSKPTPPGTASNPLPPPAPATLPGFSATDLLAYERQLAMSK 58
Query: 379 MGGVHALMHPQAQHPLKQAAMGVGSAGASQAIYDG 413
MGGVHALMHPQ QHPLKQAA+ GASQAIYDG
Sbjct: 59 MGGVHALMHPQGQHPLKQAAI-----GASQAIYDG 88
>gi|171695760|ref|XP_001912804.1| hypothetical protein [Podospora anserina S mat+]
gi|170948122|emb|CAP60286.1| unnamed protein product [Podospora anserina S mat+]
Length = 390
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 103/332 (31%), Positives = 161/332 (48%), Gaps = 34/332 (10%)
Query: 32 GLLAAPQIEPIPSGNLPPGF-DPS-------TCRSVYVGNIHTQVTEPLLQEVFSSTGPV 83
G+ AP P +G+ PGF PS +++++G + + E ++ VFS+T
Sbjct: 8 GVTGAPGNGPNVNGSGDPGFASPSQMPAPSEAAKTLWMGEMEPWMDENFIKNVFSNTSAE 67
Query: 84 EGCKLIRKDKSS----YGFIHYFDRRSAAMAILSLNGRHLFG--QPIKVNWAYASG---Q 134
+ +D++S Y F+ F AA L+LNG + + K+NWA G +
Sbjct: 68 NVQVKVIRDRNSGNAGYCFVE-FSTPEAAQKALALNGTPVPNSQRVFKLNWASGGGLVDR 126
Query: 135 REDTSGHFNIFVGDLSPEVTDATLFACF-SVYPSCSDARVMWDQKTGRSRGFGFVSFRNQ 193
R+D ++IFVGDL PEV + L + F S +PSC A++M D TG+SRG+GFV F ++
Sbjct: 127 RDDRGPEYSIFVGDLGPEVNEFVLVSLFQSRFPSCKSAKIMTDAMTGQSRGYGFVRFSDE 186
Query: 194 QDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDG----KE 249
D Q A+ ++ G + G+R +R + AT + + G G
Sbjct: 187 SDQQRALVEMQGVYCGNRPMRISTATP---KTRYMMPPVPGAQAPMWGGVPPYGYAQPAA 243
Query: 250 TTNTEAPEN---NPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVR 306
N P N +P TTV+VG L+ VT+ +L F G G I V++ KG GFV+
Sbjct: 244 PFNPMQPMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQ--GFGEITYVKIPPGKGCGFVQ 301
Query: 307 YSTHAEAALAIQMGNTTQSSYLFGKQMKCSWG 338
+ A +AI N Q + +++ SWG
Sbjct: 302 FVHRHAAEMAI---NQMQGYPIGNSRVRLSWG 330
Score = 43.9 bits (102), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 94/226 (41%), Gaps = 45/226 (19%)
Query: 144 IFVGDLSPEVTDATLFACFS-VYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAIND 202
+++G++ P + + + FS +V+ D+ +G + G+ FV F + AQ A+
Sbjct: 43 LWMGEMEPWMDENFIKNVFSNTSAENVQVKVIRDRNSGNA-GYCFVEFSTPEAAQKAL-A 100
Query: 203 LTGKWL--GSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNP 260
L G + R + NWA+ G L + + G P
Sbjct: 101 LNGTPVPNSQRVFKLNWASGGG----------------LVDRRDDRG------------P 132
Query: 261 QYTTVYVGNLAPEVTQLDLHRHFHSL-----GAGVIEEVRVQRDKGFGFVRYSTHAEAAL 315
+Y+ ++VG+L PEV + L F S A ++ + + +G+GFVR+S ++
Sbjct: 133 EYS-IFVGDLGPEVNEFVLVSLFQSRFPSCKSAKIMTDAMTGQSRGYGFVRFSDESDQQR 191
Query: 316 AIQMGNTTQSSYLFGKQMKCSWGSKPTPPGTSSNPLPPPAAAPIPG 361
A+ Q Y + M+ S TP P P A AP+ G
Sbjct: 192 ALV---EMQGVYCGNRPMRI---STATPKTRYMMPPVPGAQAPMWG 231
>gi|406866319|gb|EKD19359.1| RNA-binding protein [Marssonina brunnea f. sp. 'multigermtubi'
MB_m1]
Length = 812
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 96/309 (31%), Positives = 148/309 (47%), Gaps = 35/309 (11%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS----YGFIHYFDRRSAAMAILS 113
++++G + + E ++ V+ G K+IR DK S Y FI F +AA LS
Sbjct: 308 TLWMGELEPWIDENFVRSVWFGMGEQVNVKMIR-DKFSGNAGYCFID-FSSPAAAAKALS 365
Query: 114 LNGRHL--FGQPIKVNWAYASG---QREDTSGHFNIFVGDLSPEVTDATLFACFSV-YPS 167
LNG + +P K+NWA G +R+D ++IFVGDL PEV + L + F +PS
Sbjct: 366 LNGSMIPNTARPFKLNWASGGGLADRRDDRGPEYSIFVGDLGPEVNEYVLVSLFQARFPS 425
Query: 168 CSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT-------- 219
C A++M D +G SRG+GFV F ++ D Q A+ ++ G + G+R +R + AT
Sbjct: 426 CKSAKIMTDPISGMSRGYGFVRFADEGDQQRALTEMQGVYCGNRPMRISTATPKNKAGGG 485
Query: 220 -------KGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPEN---NPQYTTVYVGN 269
+ G N A + + + P N +P TTV+VG
Sbjct: 486 GPAGMPMQQGGPNMGPGMPAAPGMYSMGAPPPMQYGGGYGQQQPMNQFTDPNNTTVFVGG 545
Query: 270 LAPEVTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLF 329
L+ VT+ +L F G G I V++ KG GFV++ A +AI N Q +
Sbjct: 546 LSGYVTEDELRSFFQ--GFGEITYVKIPPGKGCGFVQFVQRHAAEMAI---NQMQGYPIG 600
Query: 330 GKQMKCSWG 338
+++ SWG
Sbjct: 601 NSRVRLSWG 609
>gi|213515090|ref|NP_001135023.1| cytotoxic granule-associated RNA binding protein 1 [Salmo salar]
gi|209738084|gb|ACI69911.1| Nucleolysin TIA-1 [Salmo salar]
Length = 409
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 98/326 (30%), Positives = 154/326 (47%), Gaps = 38/326 (11%)
Query: 41 PIPSGNLPPGFDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEG--CKLIRKDKSS--- 95
PI S +L P + ++++GNIH+ V E +L + P +G CKL +S
Sbjct: 6 PIYSASLAADI-PQSGSTLHIGNIHSAVDENVLVSILQQFFPGQGFQCKLFPDPNNSPDL 64
Query: 96 YGFIHYFDRRSAAMAILSLNGRHLFGQPIKVNWAYASG----QREDTSGHFNIFVGDLSP 151
Y F+ + D +A A+ LNGR + G+ +KV+WA Q + + +I+VGDL
Sbjct: 65 YCFMTFADVNTATSALSILNGREVMGKKLKVSWASGGAGQFKQSQISGTTHSIYVGDLPH 124
Query: 152 EVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSR 211
E D L F + +RV+ D ++G S+GFGF+ +R+Q +A+ AI + G + S+
Sbjct: 125 ECDDNMLAQAFRPFGEVLSSRVVRDPESGLSKGFGFIVYRHQYEAEEAIQKMHGGTISSK 184
Query: 212 QIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLA 271
++ +WAT+ S SV +L N ++ TT+YVGNL
Sbjct: 185 SVKVSWATR---------SKATTSVPQL----------NYNDVYQQSGAHNTTLYVGNLP 225
Query: 272 PEVTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGK 331
+ + L F GA + + ++ DK F F++ TH AA +I N + G
Sbjct: 226 ESMKEQFLISFFEPYGA--VLDTKIFHDKHFAFIKMDTHEAAATSIVKCNGQP---VDGC 280
Query: 332 QMKCSWGSKPTPP---GTSSNPLPPP 354
MK W S+ P SNP P P
Sbjct: 281 VMKV-WWSRDNPNLQGNMPSNPAPQP 305
>gi|346977902|gb|EGY21354.1| RNA-binding post-transcriptional regulator csx1 [Verticillium
dahliae VdLs.17]
Length = 418
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 99/320 (30%), Positives = 155/320 (48%), Gaps = 37/320 (11%)
Query: 49 PGFDPSTCRS-VYVGNIHTQVTEPLLQEVFSS-TGPVEGCKLIRKDKSS----YGFIHYF 102
PG P ++ +++G + + E ++ VF++ TG K+IR DKSS Y F+ F
Sbjct: 42 PGNSPDGNKTTLWMGELEPWMDENFIKGVFATATGEQVNVKVIR-DKSSGNAGYCFVE-F 99
Query: 103 DRRSAAMAILSLNGRHL--FGQPIKVNWAYASG---QREDTSGHFNIFVGDLSPEVTDAT 157
+ AA L+LNG + + K+NWA G +R+D F+IFVGDL PEV +
Sbjct: 100 NSTDAASKALALNGTPVPNSARMFKLNWASGGGINDRRDDRGPEFSIFVGDLGPEVNEFV 159
Query: 158 LFACFSV-YPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCN 216
L + F +PSC A++M D TG+SRG+GFV F ++QD Q A+ ++ G + G+R +R +
Sbjct: 160 LVSLFQARFPSCKSAKIMTDAVTGQSRGYGFVRFTDEQDQQRALVEMQGVYCGNRPMRIS 219
Query: 217 WATKGAGNNEDKQSSDAKSV------------------VELTNGSSEDGKETTNTEAPEN 258
AT N+ + + + G +
Sbjct: 220 TATPKNRNHGPYGAQQGHQMPPAMHPHQPQAFYGVPPGPQFNQGYGAAPQFQQQQMNQFT 279
Query: 259 NPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQ 318
+P TTV+VG L+ VT+ +L F G G I V++ KG GFV++ A +AI
Sbjct: 280 DPNNTTVFVGGLSGYVTEDELRSFFQ--GFGEITYVKIPPGKGCGFVQFVHRHAAEMAI- 336
Query: 319 MGNTTQSSYLFGKQMKCSWG 338
N Q + +++ SWG
Sbjct: 337 --NQMQGYPIGNSRVRLSWG 354
>gi|162312303|ref|NP_596601.2| mRNA processing factor (predicted) [Schizosaccharomyces pombe
972h-]
gi|26401571|sp|O60176.2|YG41_SCHPO RecName: Full=Uncharacterized RNA-binding protein C23E6.01c
gi|157310462|emb|CAB83010.2| mRNA processing factor (predicted) [Schizosaccharomyces pombe]
Length = 473
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 115/378 (30%), Positives = 177/378 (46%), Gaps = 62/378 (16%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKD----KSSYGFIHYFDRRSAAMAILS 113
++++G + VTE +Q+V+++ G KLIR + Y F+ + A+ A +S
Sbjct: 94 TLWMGELEPWVTEAFIQQVWNTLGKAVKVKLIRNRYTGMNAGYCFVEFASPHEASSA-MS 152
Query: 114 LNGR------HLFGQPIKVNWAYASGQREDT---SGHFNIFVGDLSPEVTDATLFACF-S 163
+N + HLF K+NWA G RE + + ++IFVGDLSP V + +++ F S
Sbjct: 153 MNNKPIPGTNHLF----KLNWASGGGLREKSISKASEYSIFVGDLSPNVNEFDVYSLFAS 208
Query: 164 VYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAG 223
Y SC A++M D +T SRG+GFV F ++ D +SA+ ++ G+ G R IR AT
Sbjct: 209 RYNSCKSAKIMTDPQTNVSRGYGFVRFTDENDQKSALAEMQGQICGDRPIRVGLATP--- 265
Query: 224 NNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQY-----TTVYVGNLAPEVTQLD 278
K + S V + S A + PQ+ +TV+VG L+ V++ +
Sbjct: 266 ----KSKAHVFSPVNVVPVSM---PPVGFYSAAQPVPQFADTANSTVFVGGLSKFVSEEE 318
Query: 279 LHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWG 338
L F + G I V++ KG GFV++ A +AI N Q L +++ SWG
Sbjct: 319 LKYLFQNFGE--IVYVKIPPGKGCGFVQFVNRQSAEIAI---NQLQGYPLGNSRIRLSWG 373
Query: 339 -----------------SKPTPPGTSSNP---LPPPAA-APIPGLSAADLLAYER--QIA 375
S+ T P TS P LPP A +P P ++ + L R I
Sbjct: 374 RNQNPIAAPALNYQSQVSQTTIPATSLFPAMSLPPQAQFSPYPAVAPSPLALQTRGAPIG 433
Query: 376 MSKMGGVHALMHPQAQHP 393
M G AL+ Q P
Sbjct: 434 MEISIGSPALVPDQMHIP 451
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/199 (22%), Positives = 91/199 (45%), Gaps = 37/199 (18%)
Query: 130 YASGQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVS 189
Y S + E+ +++G+L P VT+A + ++ +++ ++ TG + G+ FV
Sbjct: 81 YGSSRDENVYQKTTLWMGELEPWVTEAFIQQVWNTLGKAVKVKLIRNRYTGMNAGYCFVE 140
Query: 190 FRNQQDAQSAINDLTGKWLGSRQI-RCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGK 248
F + +A SA++ G+ + + NWA+ G +
Sbjct: 141 FASPHEASSAMSMNNKPIPGTNHLFKLNWASGGG------------------------LR 176
Query: 249 ETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSL-----GAGVIEEVRVQRDKGFG 303
E + ++A E +++VG+L+P V + D++ F S A ++ + + +G+G
Sbjct: 177 EKSISKASE-----YSIFVGDLSPNVNEFDVYSLFASRYNSCKSAKIMTDPQTNVSRGYG 231
Query: 304 FVRYSTHAE--AALAIQMG 320
FVR++ + +ALA G
Sbjct: 232 FVRFTDENDQKSALAEMQG 250
>gi|302420775|ref|XP_003008218.1| RNA-binding post-transcriptional regulator csx1 [Verticillium
albo-atrum VaMs.102]
gi|261353869|gb|EEY16297.1| RNA-binding post-transcriptional regulator csx1 [Verticillium
albo-atrum VaMs.102]
Length = 430
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 99/320 (30%), Positives = 155/320 (48%), Gaps = 37/320 (11%)
Query: 49 PGFDPSTCRS-VYVGNIHTQVTEPLLQEVFSS-TGPVEGCKLIRKDKSS----YGFIHYF 102
PG P ++ +++G + + E ++ VF++ TG K+IR DKSS Y F+ F
Sbjct: 42 PGNSPDGNKTTLWMGELEPWMDENFIKGVFATATGEQVNVKVIR-DKSSGNAGYCFVE-F 99
Query: 103 DRRSAAMAILSLNGRHL--FGQPIKVNWAYASG---QREDTSGHFNIFVGDLSPEVTDAT 157
+ AA L+LNG + + K+NWA G +R+D F+IFVGDL PEV +
Sbjct: 100 NSTDAASKALALNGTPVPNSARMFKLNWASGGGINDRRDDRGPEFSIFVGDLGPEVNEFV 159
Query: 158 LFACFSV-YPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCN 216
L + F +PSC A++M D TG+SRG+GFV F ++QD Q A+ ++ G + G+R +R +
Sbjct: 160 LVSLFQARFPSCKSAKIMTDAVTGQSRGYGFVRFTDEQDQQRALVEMQGVYCGNRPMRIS 219
Query: 217 WATKGAGNNEDKQSSDAKSV------------------VELTNGSSEDGKETTNTEAPEN 258
AT N+ + + + G +
Sbjct: 220 TATPKNRNHGPYGAQQGHQMPPAMHPHQPQAFYGVPPGPQFNQGYGAAPQFQQQQMNQFT 279
Query: 259 NPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQ 318
+P TTV+VG L+ VT+ +L F G G I V++ KG GFV++ A +AI
Sbjct: 280 DPNNTTVFVGGLSGYVTEDELRSFFQ--GFGEITYVKIPPGKGCGFVQFVHRHAAEMAI- 336
Query: 319 MGNTTQSSYLFGKQMKCSWG 338
N Q + +++ SWG
Sbjct: 337 --NQMQGYPIGNSRVRLSWG 354
>gi|325183868|emb|CCA18326.1| conserved hypothetical protein [Albugo laibachii Nc14]
gi|325183943|emb|CCA18401.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 429
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 94/295 (31%), Positives = 146/295 (49%), Gaps = 37/295 (12%)
Query: 56 CRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDK-----SSYGFIHYFDRRSAAMA 110
C+++++G+I E + +F+S KLIR DK + YGF+ + ++ A
Sbjct: 5 CKTLWMGDIQLNWDEAYIGSLFASAVEQPSIKLIR-DKVTGYPAGYGFLEFPSQQGAQAV 63
Query: 111 ILSLNGR------HLFGQPIKVNWAYASGQREDTSGHFNIFVGDLSPEVTDATLFACFSV 164
+ + NG+ H F ++NW A G+R DT +IFVGDL+PEV+D L + FS
Sbjct: 64 LNTFNGQIVPNTIHRF----RLNWG-AGGRRIDTVEDHSIFVGDLAPEVSDELLLSTFST 118
Query: 165 -YPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAG 223
+ S A+V+ D T +GFGFV F ++ +A A+ + G + SR +R + AT
Sbjct: 119 RFSSVRGAKVVIDPVTRMPKGFGFVRFGDKGEADQALQTMNGVYCSSRPMRVSVATDRTK 178
Query: 224 NNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHF 283
+ +VV T NTE N TTV++G L P T+ DL F
Sbjct: 179 TRGIMPPPISYTVV-----------GTGNTEEEGAN---TTVFIGGLDPSTTEDDLRARF 224
Query: 284 HSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWG 338
+G I V+V +G GFV+Y T A +AI N + + G +++C+WG
Sbjct: 225 GVIGE--IMSVKVPPGRGCGFVQYVTKDAADVAI---NQMNGALINGVKVRCAWG 274
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 83/188 (44%), Gaps = 29/188 (15%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSST-GPVEGCKLI----RKDKSSYGFIHYFDRRSAAMAIL 112
S++VG++ +V++ LL FS+ V G K++ + +GF+ + D+ A A+
Sbjct: 97 SIFVGDLAPEVSDELLLSTFSTRFSSVRGAKVVIDPVTRMPKGFGFVRFGDKGEADQALQ 156
Query: 113 SLNGRHLFGQPIKVNWA------------------YASGQREDTSGHFNIFVGDLSPEVT 154
++NG + +P++V+ A +G E+ + +F+G L P T
Sbjct: 157 TMNGVYCSSRPMRVSVATDRTKTRGIMPPPISYTVVGTGNTEEEGANTTVFIGGLDPSTT 216
Query: 155 DATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIR 214
+ L A F V +V RG GFV + + A AIN + G + ++R
Sbjct: 217 EDDLRARFGVIGEIMSVKVP------PGRGCGFVQYVTKDAADVAINQMNGALINGVKVR 270
Query: 215 CNWATKGA 222
C W A
Sbjct: 271 CAWGRSAA 278
>gi|348670884|gb|EGZ10705.1| hypothetical protein PHYSODRAFT_520170 [Phytophthora sojae]
Length = 390
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 93/282 (32%), Positives = 144/282 (51%), Gaps = 43/282 (15%)
Query: 54 STCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDK-----SSYGFIHYFDRRSAA 108
+ C+++++G+I E + +F+S G KLIR DK + YGF+ + +R A
Sbjct: 3 TECKTLWMGDIQMHWDETFISSLFASAGEQPVVKLIR-DKVTGYPAGYGFLEFPTQRGAQ 61
Query: 109 MAILSLNGR------HLFGQPIKVNWAYASGQREDTSGHFNIFVGDLSPEVTDATLFACF 162
+ + NG+ H F ++NW A G+R +TS +IFVGDL+P+VTD L + F
Sbjct: 62 QVLDTYNGQVIPNTMHRF----RMNWG-AGGRRIETSDDHSIFVGDLAPDVTDELLLSTF 116
Query: 163 -SVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKG 221
S + S A+V+ D T S+GFGFV F ++++A A+ + G + SR +R + AT+
Sbjct: 117 NSRFTSVRGAKVVMDPVTRMSKGFGFVRFGSKEEADQALQTMNGVYCSSRPMRVSVATE- 175
Query: 222 AGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHR 281
+KS + G APE TTV+VG L P T+ +L
Sbjct: 176 ----------RSKSRQQGAFG------------APEEEGTNTTVFVGGLDPSTTEDELRA 213
Query: 282 HFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTT 323
F +LG I V+V +G GFV+Y++ A +AI N T
Sbjct: 214 RFGALGE--IVSVKVPPGRGCGFVQYTSKEAAEVAITQMNGT 253
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 77/169 (45%), Gaps = 20/169 (11%)
Query: 51 FDPSTCRSVYVGNIHTQVTEPLLQEVFSST-GPVEGCKL----IRKDKSSYGFIHYFDRR 105
+ S S++VG++ VT+ LL F+S V G K+ + + +GF+ + +
Sbjct: 90 IETSDDHSIFVGDLAPDVTDELLLSTFNSRFTSVRGAKVVMDPVTRMSKGFGFVRFGSKE 149
Query: 106 SAAMAILSLNGRHLFGQPIKVNWAY---------ASGQREDTSGHFNIFVGDLSPEVTDA 156
A A+ ++NG + +P++V+ A A G E+ + +FVG L P T+
Sbjct: 150 EADQALQTMNGVYCSSRPMRVSVATERSKSRQQGAFGAPEEEGTNTTVFVGGLDPSTTED 209
Query: 157 TLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTG 205
L A F +V RG GFV + +++ A+ AI + G
Sbjct: 210 ELRARFGALGEIVSVKVP------PGRGCGFVQYTSKEAAEVAITQMNG 252
>gi|212275334|ref|NP_001130489.1| uncharacterized protein LOC100191587 [Zea mays]
gi|194689276|gb|ACF78722.1| unknown [Zea mays]
Length = 417
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 94/296 (31%), Positives = 142/296 (47%), Gaps = 37/296 (12%)
Query: 57 RSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS----YGFIHYFDRRSAAMAIL 112
R+++VG++ + E L F G V K+IR S YGF+ ++ SA A+
Sbjct: 93 RTIWVGDLQYWMDENYLHSCFGPGGEVVNIKVIRNRHSGVSEGYGFVEFYSHVSAEKALQ 152
Query: 113 SLNGRHL--FGQPIKVNWA-YASGQ-REDTSGHFNIFVGDLSPEVTDATLFACFS-VYPS 167
+ +G + + K+NWA Y+ G+ R + +IFVGDL+ +VTD L FS Y S
Sbjct: 153 NFSGHVMPNTERAFKLNWASYSMGEKRSEVPPDHSIFVGDLAVDVTDEMLLELFSNKYRS 212
Query: 168 CSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNED 227
A+V+ D TGRSRG+GFV F + D A+ ++ G + +R IR AT +
Sbjct: 213 VKGAKVIIDANTGRSRGYGFVRFGDDNDKTLAMTEMNGVYCSTRPIRVGLATPRRSQGDS 272
Query: 228 KQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLG 287
S +S V+ TN TVYVG L P V++ +L + F G
Sbjct: 273 GSSPPRQSDVDSTN---------------------RTVYVGGLDPNVSEDELRKAFAKYG 311
Query: 288 AGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQ-MKCSWGSKPT 342
+ V++ K GFV++ +A A+Q N + GKQ ++ SWG PT
Sbjct: 312 D--LASVKIPFGKQCGFVQFVNRVDAEEALQGLNGST----IGKQAIRLSWGRSPT 361
>gi|15594035|emb|CAC69852.1| nucleic acid binding protein [Nicotiana tabacum]
Length = 456
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 87/295 (29%), Positives = 146/295 (49%), Gaps = 25/295 (8%)
Query: 57 RSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS----YGFIHYFDRRSAAMAIL 112
R+++VG++ + E L+ F+ST V K+IR ++ YGF+ +F +A +
Sbjct: 117 RTIWVGDLLNWMDEDYLRNCFASTNEVASIKVIRNKQTGFSEGYGFVEFFTHAAAEKVLQ 176
Query: 113 SLNGRHL--FGQPIKVNWAYAS--GQREDTSGHFNIFVGDLSPEVTDATLFACFSV-YPS 167
+ + + QP ++NWA S +R + +IFVGDL+ +VTD L F+ YPS
Sbjct: 177 TYSCMTMPNVDQPFRLNWATFSMGDKRANNGSDLSIFVGDLAADVTDTLLHETFATKYPS 236
Query: 168 CSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNED 227
A+V++D TGRS+G+GFV F + + A+ ++ G + SR +R AT +
Sbjct: 237 VKAAKVVFDANTGRSKGYGFVRFGDDNERSQAMTEMNGVYCSSRPMRIGAATPRKSSGYQ 296
Query: 228 KQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLG 287
+Q S +NG G + P+ + TT++VG L P V+ DL + F G
Sbjct: 297 QQYSSQGG---YSNGGPAQGSQ------PDADSTNTTIFVGGLDPNVSDEDLRQPFVQYG 347
Query: 288 AGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQ-MKCSWGSKP 341
I V++ ++ +++ +A A+Q N T GKQ ++ WG P
Sbjct: 348 E--IVSVKIPVEERVWVWQFANRNDAEEALQKLNGT----FIGKQTVRLFWGRNP 396
>gi|452982866|gb|EME82624.1| hypothetical protein MYCFIDRAFT_51313 [Pseudocercospora fijiensis
CIRAD86]
Length = 414
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 98/308 (31%), Positives = 150/308 (48%), Gaps = 33/308 (10%)
Query: 45 GNLPPGFDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSSYGFIHYFDR 104
G L P D + RSV+ G + QV ++++ FS + + Y F+ + +
Sbjct: 86 GELEPWIDENFIRSVWFG-MGYQVNVKMIRDKFSGS------------NAGYCFVDFENP 132
Query: 105 RSAAMAILSLNGRHL--FGQPIKVNWAYASG----QREDTSGHFNIFVGDLSPEVTDATL 158
SAA A L+LNG+ + + K+NWA G R+D ++IFVGDL PEV + L
Sbjct: 133 DSAARA-LALNGQMIPNSNRQFKLNWASGGGLADRSRDDRGPEYSIFVGDLGPEVNEYVL 191
Query: 159 FACF-SVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNW 217
+ F + YPSC A++M D +G SRG+GFV F ++ D Q A++++ G + G+R +R +
Sbjct: 192 MSLFQNKYPSCKSAKIMSDPISGMSRGYGFVRFADETDQQKALHEMQGVYCGNRPMRIST 251
Query: 218 AT-KGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTE-APE-----NNPQYTTVYVGNL 270
AT K V G G AP+ +P TTV+VG L
Sbjct: 252 ATPKNKSGGAGGPGMGGMQQVPGGQGMYSMGAPPMGYYGAPQPMNQFTDPNNTTVFVGGL 311
Query: 271 APEVTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFG 330
+ VT+ +L F G G I V++ KG GFV++ A +AI N Q +
Sbjct: 312 SGYVTEDELRSFFQ--GFGEITYVKIPPGKGCGFVQFVQRHAAEMAI---NQMQGYPIGN 366
Query: 331 KQMKCSWG 338
+++ SWG
Sbjct: 367 SRVRLSWG 374
>gi|225461001|ref|XP_002280601.1| PREDICTED: RNA-binding post-transcriptional regulator csx1-like
[Vitis vinifera]
Length = 417
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 95/306 (31%), Positives = 150/306 (49%), Gaps = 32/306 (10%)
Query: 48 PPGFDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS----YGFIHYFD 103
P +P RS+++G++ + E L FS TG V K+IR ++ YGFI
Sbjct: 81 PQASNPEEIRSLWIGDLQPWMEENYLWGCFSQTGEVVSVKVIRNKQTGQCEGYGFIELAT 140
Query: 104 RRSAAMAILSLNGRHLFG--QPIKVNWAY--ASGQREDTSGHFNIFVGDLSPEVTDATLF 159
R +A + + NG + Q ++NWA A +R D + + IFVGDL+ +VTD L
Sbjct: 141 RAAAERILQTYNGTLMPNSEQNFRLNWATLGAGERRADDTPDYTIFVGDLASDVTDYVLQ 200
Query: 160 ACFSV-YPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWA 218
F YPS A+V+ D+ TGRS+G+GFV F ++ + A+N++ G + +R +R A
Sbjct: 201 ETFRGHYPSVKGAKVVTDRTTGRSKGYGFVRFGDEGEQLRAMNEMNGMFCSTRPMRIGPA 260
Query: 219 T--KGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQ 276
K G + +++S + T E++P TT++VG L VT
Sbjct: 261 ATKKPVGGQQFQKAS----------------FQNTQGNQGESDPNNTTIFVGGLDSNVTD 304
Query: 277 LDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCS 336
L + F G V V++ K GFV+++ A A A+ N TQ L + ++ S
Sbjct: 305 DYLRQVFSQYGELV--HVKIPVGKRCGFVQFANRACAEQALAGLNGTQ---LGAQSIRLS 359
Query: 337 WGSKPT 342
WG P+
Sbjct: 360 WGRSPS 365
>gi|302792090|ref|XP_002977811.1| hypothetical protein SELMODRAFT_232989 [Selaginella moellendorffii]
gi|300154514|gb|EFJ21149.1| hypothetical protein SELMODRAFT_232989 [Selaginella moellendorffii]
Length = 455
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 91/320 (28%), Positives = 157/320 (49%), Gaps = 39/320 (12%)
Query: 56 CRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSSY----GFIHYFDRRSAAMAI 111
R++++G++ + E L+ +F+ TG V K+IR ++ Y GFI + +A +
Sbjct: 27 VRTLWIGDLQYWMDENYLRNLFAHTGEVLSAKVIRNKQTGYPEGYGFIEFNSHPAAERVL 86
Query: 112 LSLNGRHL--FGQPIKVNWA-YASGQ-REDTSGHFNIFVGDLSPEVTDATLFACFSV-YP 166
L+ NG + Q ++NWA + G+ R D +IFVGDL+P+VTD L F +P
Sbjct: 87 LAYNGTQMPQTEQAFRLNWASFGMGEKRMDGGPELSIFVGDLAPDVTDYMLHETFRTRFP 146
Query: 167 SCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNE 226
S A+V+ D TGRS+G+GFV F ++ + A++++ G + SR +R + AT
Sbjct: 147 SVRGAKVVIDAVTGRSKGYGFVRFADENERARAMSEMNGVYCSSRPMRISAATPKKAMAA 206
Query: 227 DKQSSDAKSVVELTNGSSEDGKET-----------------------TNTEAPENNPQYT 263
+ A ++V +S T + P+++P T
Sbjct: 207 GLTTVTAATIVPQPTIASPFKAATTTTTPTYQTMPYSITPPPSLSIQSQVLPPDSDPTNT 266
Query: 264 TVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTT 323
T++VG L +T+ ++ + F +G V V++ KG FV+Y+ A A+Q + T
Sbjct: 267 TIFVGGLDLNITEEEVKQTFSQIGELV--SVKIPPGKGCAFVQYAQRNSAEDALQRLHGT 324
Query: 324 QSSYLFGKQ-MKCSWGSKPT 342
+ G+Q ++ SWG PT
Sbjct: 325 ----VIGQQAIRLSWGRSPT 340
Score = 42.7 bits (99), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 44/87 (50%), Gaps = 3/87 (3%)
Query: 42 IPSGNLPPGFDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSSYGFIHY 101
I S LPP DP T +++VG + +TE +++ FS G + K+ F+ Y
Sbjct: 252 IQSQVLPPDSDP-TNTTIFVGGLDLNITEEEVKQTFSQIGELVSVKI--PPGKGCAFVQY 308
Query: 102 FDRRSAAMAILSLNGRHLFGQPIKVNW 128
R SA A+ L+G + Q I+++W
Sbjct: 309 AQRNSAEDALQRLHGTVIGQQAIRLSW 335
>gi|320587473|gb|EFW99953.1| mRNA-binding post-transcriptional regulator [Grosmannia clavigera
kw1407]
Length = 399
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 102/321 (31%), Positives = 158/321 (49%), Gaps = 36/321 (11%)
Query: 46 NLPPGFDPSTCRSVYVGNIHTQVTEPLLQEVFSS-TGPVEGCKLIRKDKSS---YGFIHY 101
+LP G + S +++++G + + E ++ VFS+ +G K+IR S Y F+
Sbjct: 33 SLPQGSESS--KTLWMGELEPWMDENFVKNVFSTVSGEAVNVKVIRDRASGNAGYCFVE- 89
Query: 102 FDRRSAAMAILSLNGRHLFG--QPIKVNWAYASG---QREDTSGHFNIFVGDLSPEVTDA 156
F+ AA L+LNG + + K+NWA G +R+D S F+IFVGDL PEV +
Sbjct: 90 FNTADAATKALTLNGSPVPNSTRAFKLNWASGGGLVDRRDDRSPEFSIFVGDLGPEVNEF 149
Query: 157 TLFACFSV-YPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRC 215
L + F +PSC A++M D TG+SRG+GFV F ++ D Q A+ ++ G + G+R +R
Sbjct: 150 VLVSLFQARFPSCKSAKIMTDAVTGQSRGYGFVRFSDETDQQRALVEMQGVYCGNRPMRI 209
Query: 216 NWATKGA-----GNNEDKQSSDAKSVVELTNGSSEDGKETTNTE--------APE----- 257
+ AT G + Q A + G G AP+
Sbjct: 210 STATPKTRSHQYGQGQHGQHMPAHGPAQGNMGWGGMGNGGNGGYYQPGFGPMAPQPMNQF 269
Query: 258 NNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAI 317
+P TTV+VG L+ VT+ +L F G G I V++ KG GFV++ A +AI
Sbjct: 270 TDPNNTTVFVGGLSGYVTEDELRSFFQ--GFGEITYVKIPPGKGCGFVQFVHRHAAEMAI 327
Query: 318 QMGNTTQSSYLFGKQMKCSWG 338
N Q + +++ SWG
Sbjct: 328 ---NQMQGYPIGNSRVRLSWG 345
>gi|194220644|ref|XP_001917255.1| PREDICTED: nucleolysin TIA-1 isoform p40-like [Equus caballus]
Length = 300
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 71/196 (36%), Positives = 110/196 (56%), Gaps = 30/196 (15%)
Query: 55 TCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRRSAAMAIL 112
T +++YVGN+ VTE L+ ++FS GP + CK+I + Y F+ +++ R AA A+
Sbjct: 5 TPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFYEHRHAAAALA 64
Query: 113 SLNGRHLFGQPIKVNWAYA-SGQREDTSG-----------HFNIFVGDLSPEVTDATLFA 160
++NGR + G+ +KVNWA S Q++DTS HF++FVGDLSPE+T + A
Sbjct: 65 AMNGRKIMGKEVKVNWATTPSSQKKDTSSSTVVSTQRSQDHFHVFVGDLSPEITTEDIKA 124
Query: 161 CFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQ----------------QDAQSAINDLT 204
F+ + SDARV+ D TG+S+G+GFVSF N+ + A AI +
Sbjct: 125 AFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWIFPDKGYSFVRFNSHESAAHAIVSVN 184
Query: 205 GKWLGSRQIRCNWATK 220
G + ++C W +
Sbjct: 185 GTTIEGHVVKCYWGKE 200
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 100/217 (46%), Gaps = 45/217 (20%)
Query: 144 IFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDL 203
++VG+LS +VT+A + FS C + +++ D T + + FV F + A +A+ +
Sbjct: 9 LYVGNLSRDVTEALILQLFSQIGPCKNCKMIMD--TAGNDPYCFVEFYEHRHAAAALAAM 66
Query: 204 TGKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYT 263
G+ + ++++ NWAT + +D SS S + + +
Sbjct: 67 NGRKIMGKEVKVNWATTPSSQKKDTSSSTVVST--------------------QRSQDHF 106
Query: 264 TVYVGNLAPEVTQLDLHRHFHSLG----AGVIEEVRVQR----------------DKGFG 303
V+VG+L+PE+T D+ F G A V++++ + DKG+
Sbjct: 107 HVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWIFPDKGYS 166
Query: 304 FVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSK 340
FVR+++H AA AI N T + G +KC WG +
Sbjct: 167 FVRFNSHESAAHAIVSVNGTT---IEGHVVKCYWGKE 200
>gi|242073268|ref|XP_002446570.1| hypothetical protein SORBIDRAFT_06g018280 [Sorghum bicolor]
gi|241937753|gb|EES10898.1| hypothetical protein SORBIDRAFT_06g018280 [Sorghum bicolor]
Length = 423
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 92/296 (31%), Positives = 148/296 (50%), Gaps = 37/296 (12%)
Query: 57 RSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS----YGFIHYFDRRSAAMAIL 112
++++VG++ + E L F +G V K+IR ++ YGF+ +F SA A+
Sbjct: 101 KTIWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRQTGQSEGYGFVEFFSHASAEKALQ 160
Query: 113 SLNGRHL--FGQPIKVNWA-YASGQ-REDTSGHFNIFVGDLSPEVTDATLFACFSV-YPS 167
+ G + + K+NWA Y+ G+ R + + +IFVGDL+ +VTD L FS Y S
Sbjct: 161 NFTGHVMPNTDRAFKLNWASYSMGEKRSEVASDHSIFVGDLAADVTDEMLLELFSSKYRS 220
Query: 168 CSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNED 227
A+V+ D TGRSRG+GFV F + D A++++ G + +R IR AT + +
Sbjct: 221 VKGAKVIIDANTGRSRGYGFVRFGDDNDKSHAMSEMNGVYCSTRPIRIGPATPRRSSGDS 280
Query: 228 KQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLG 287
S+ S DG + TVYVG L P V++ +L + F G
Sbjct: 281 GSSTPGHS----------DGDSSNR-----------TVYVGGLDPNVSEDELRKAFAKYG 319
Query: 288 AGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQ-MKCSWGSKPT 342
+ V++ K GFV++++ +A A+Q N + L GKQ ++ SWG P+
Sbjct: 320 D--LASVKIPLGKQCGFVQFASRTDAEEALQGLNGS----LIGKQAVRLSWGRSPS 369
Score = 41.6 bits (96), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 40/76 (52%), Gaps = 2/76 (2%)
Query: 54 STCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSSYGFIHYFDRRSAAMAILS 113
S+ R+VYVG + V+E L++ F+ G + K+ + GF+ + R A A+
Sbjct: 292 SSNRTVYVGGLDPNVSEDELRKAFAKYGDLASVKIPLGKQC--GFVQFASRTDAEEALQG 349
Query: 114 LNGRHLFGQPIKVNWA 129
LNG + Q ++++W
Sbjct: 350 LNGSLIGKQAVRLSWG 365
>gi|258576821|ref|XP_002542592.1| hypothetical protein UREG_02108 [Uncinocarpus reesii 1704]
gi|237902858|gb|EEP77259.1| hypothetical protein UREG_02108 [Uncinocarpus reesii 1704]
Length = 399
Score = 124 bits (312), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 95/299 (31%), Positives = 146/299 (48%), Gaps = 24/299 (8%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRK----DKSSYGFIHYFDRRSAAMAILS 113
++++G + + E ++ ++ G K+IR + Y F+ F +AA LS
Sbjct: 63 TLWMGELEPWIDENFIRNIWYQMGEQVNVKMIRDKFSGSNAGYCFVD-FATPAAAAKALS 121
Query: 114 LNGRHL--FGQPIKVNWAYASG----QREDTSGHFNIFVGDLSPEVTDATLFACF-SVYP 166
+NG + +P K+NWA G RED + ++IFVGDL PEV + L + F S +P
Sbjct: 122 VNGTPMPNTNRPFKLNWATGGGLSDRNREDRTPEYSIFVGDLGPEVNEYVLVSLFQSRFP 181
Query: 167 SCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT---KG-A 222
SC A++M D +G SRG+GFV F ++ D Q A+ ++ G + G+R +R + AT KG A
Sbjct: 182 SCKSAKIMTDPISGMSRGYGFVRFSDETDQQRALTEMQGVYCGNRPMRISTATPKNKGPA 241
Query: 223 GNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPEN---NPQYTTVYVGNLAPEVTQLDL 279
G A T P N +P TTV+VG L+ VT+ +L
Sbjct: 242 GGPGQMGMPGAPPAGMYPPAMGGPPMGYYGTPQPMNQFTDPNNTTVFVGGLSGYVTEDEL 301
Query: 280 HRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWG 338
F G G I V++ KG GFV++ A +AI N Q + +++ SWG
Sbjct: 302 RSFFQ--GFGEITYVKIPPGKGCGFVQFVQRHAAEMAI---NQMQGYPIGNSRVRLSWG 355
>gi|224124344|ref|XP_002319308.1| predicted protein [Populus trichocarpa]
gi|222857684|gb|EEE95231.1| predicted protein [Populus trichocarpa]
Length = 344
Score = 124 bits (312), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 85/296 (28%), Positives = 147/296 (49%), Gaps = 29/296 (9%)
Query: 56 CRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSSY----GFIHYFDRRSAAMAI 111
+S+++G++ + E + +FS+TG V K+IR ++ Y GFI + +A +
Sbjct: 66 IKSLWIGDLQQWMDENYILSIFSTTGEVVQAKVIRNKQTGYPEGYGFIEFVSHAAAERIL 125
Query: 112 LSLNGRHL--FGQPIKVNWAY--ASGQREDTSGHFNIFVGDLSPEVTDATLFACF-SVYP 166
+ NG + Q ++NWA A +R+D + +F+GDL+ +V D L F +VY
Sbjct: 126 QTYNGTPMPNSEQTFRLNWATLGAGERRQDDGPDYTVFIGDLAADVNDYLLQETFRNVYS 185
Query: 167 SCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNE 226
S A+V+ D+ TGRS+G+GFV F ++ + A+ ++ G++ +R +R
Sbjct: 186 SVKGAKVVTDRVTGRSKGYGFVRFADENEQMRAMVEMNGQYCSTRPMRI----------- 234
Query: 227 DKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSL 286
A + LT + ++ E++P TT++VG L P VT L F
Sbjct: 235 ----GPAATKKPLTQQYQKAAYQSPQGNQGESDPNNTTIFVGALDPSVTDDTLRAVFSKY 290
Query: 287 GAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSKPT 342
G V V++ K GFV+++ A A+ M N TQ + G+ ++ SWG P+
Sbjct: 291 GELV--HVKIPAGKRCGFVQFANRTCAEQALSMLNGTQ---IAGQNIRLSWGRSPS 341
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 42/77 (54%), Gaps = 3/77 (3%)
Query: 52 DPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSSYGFIHYFDRRSAAMAI 111
DP+ +++VG + VT+ L+ VFS G + K+ + GF+ + +R A A+
Sbjct: 263 DPNNT-TIFVGALDPSVTDDTLRAVFSKYGELVHVKIPAGKRC--GFVQFANRTCAEQAL 319
Query: 112 LSLNGRHLFGQPIKVNW 128
LNG + GQ I+++W
Sbjct: 320 SMLNGTQIAGQNIRLSW 336
>gi|451846221|gb|EMD59531.1| hypothetical protein COCSADRAFT_251085 [Cochliobolus sativus
ND90Pr]
Length = 406
Score = 124 bits (311), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 94/304 (30%), Positives = 150/304 (49%), Gaps = 32/304 (10%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS----YGFIHYFDRRSAAMAILS 113
++++G + + E ++ ++ + G K+IR DK S Y F+ + +AA A L+
Sbjct: 65 TLWMGELEPWIDENFVRSIWYNMGETVNVKMIR-DKFSGNAGYCFVDFASPDAAAKA-LN 122
Query: 114 LNGRHL--FGQPIKVNWAYASG----QREDTSGHFNIFVGDLSPEVTDATLFACF-SVYP 166
LNG+ + +P K+NWA G R++ F+IFVGDL PEVT+ L F + YP
Sbjct: 123 LNGQLIPNSNRPFKLNWASGGGLADRSRDERGPEFSIFVGDLGPEVTEFVLVQLFQNKYP 182
Query: 167 SCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNE 226
S A++M D +G SRG+GFV F +++D Q A+ ++ G + G+R +R + AT N
Sbjct: 183 STKSAKIMSDPISGMSRGYGFVRFASEEDQQKALTEMQGVYCGNRPMRISTAT--PKNKS 240
Query: 227 DKQSSDAKSVVELTNGSSEDGKETTNTE-------APE-----NNPQYTTVYVGNLAPEV 274
+ G G + AP+ +P TTV+VG L+ V
Sbjct: 241 GGPGGPGGMGMPQGAGGPGMGMYSMGAPPMGNYYGAPQPMNQFTDPNNTTVFVGGLSGYV 300
Query: 275 TQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMK 334
T+ +L F G G I V++ KG GFV++ A +AI N Q + +++
Sbjct: 301 TEDELRSFFQ--GFGEITYVKIPPGKGCGFVQFVQRHAAEMAI---NQMQGYPIGNSRVR 355
Query: 335 CSWG 338
SWG
Sbjct: 356 LSWG 359
>gi|302784144|ref|XP_002973844.1| hypothetical protein SELMODRAFT_100454 [Selaginella moellendorffii]
gi|302803590|ref|XP_002983548.1| hypothetical protein SELMODRAFT_118305 [Selaginella moellendorffii]
gi|300148791|gb|EFJ15449.1| hypothetical protein SELMODRAFT_118305 [Selaginella moellendorffii]
gi|300158176|gb|EFJ24799.1| hypothetical protein SELMODRAFT_100454 [Selaginella moellendorffii]
Length = 350
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 93/305 (30%), Positives = 148/305 (48%), Gaps = 35/305 (11%)
Query: 49 PGFDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSSY----GFIHYFDR 104
PG ++++VG++ + E L F+ T V+ K+IR ++ Y GF+ + +
Sbjct: 13 PGHANGELKTLWVGDLQYWMDEGYLYSCFAHTSEVQVAKVIRNKQTGYSEGYGFVEFTNH 72
Query: 105 RSAAMAILSLNGRHLFGQPI--KVNWA-YASGQREDTSG-HFNIFVGDLSPEVTDATLFA 160
+A + S NG + I ++NWA + G+R G F+IFVGDL+P+VTD L
Sbjct: 73 STAEKVLQSFNGTQMPSTDIAFRLNWACFGIGERRPDQGPDFSIFVGDLAPDVTDYMLQE 132
Query: 161 CF-SVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT 219
F S Y S A+V+ D T RS+G+GFV F ++ + A+ ++ G + +R +R + AT
Sbjct: 133 TFQSRYSSVKGAKVVMDTTTARSKGYGFVRFGDEAEKMRAMTEMAGVYCSTRPMRISTAT 192
Query: 220 KGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAP---ENNPQYTTVYVGNLAPEVTQ 276
KS+ + K N P +N+P TTV+VG L V
Sbjct: 193 P------------KKSLATIPP------KGFQNFGVPPLTDNDPSNTTVFVGGLDHSVKD 234
Query: 277 LDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCS 336
DL + F G I+ V++ K GFV++ T A A A+Q S + + ++ S
Sbjct: 235 EDLKQVFSQFGD--IQYVKIPAGKNCGFVQFYTRASAEEALQ---KLHGSTIGQQTIRLS 289
Query: 337 WGSKP 341
WG P
Sbjct: 290 WGRSP 294
Score = 45.1 bits (105), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 47/92 (51%), Gaps = 3/92 (3%)
Query: 52 DPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSSYGFIHYFDRRSAAMAI 111
DPS +V+VG + V + L++VFS G ++ K+ GF+ ++ R SA A+
Sbjct: 217 DPSNT-TVFVGGLDHSVKDEDLKQVFSQFGDIQYVKIPAGKNC--GFVQFYTRASAEEAL 273
Query: 112 LSLNGRHLFGQPIKVNWAYASGQREDTSGHFN 143
L+G + Q I+++W + ++ FN
Sbjct: 274 QKLHGSTIGQQTIRLSWGRSPANKQQVQPEFN 305
>gi|453086344|gb|EMF14386.1| RNA-binding domain-containing protein [Mycosphaerella populorum
SO2202]
Length = 425
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 97/317 (30%), Positives = 149/317 (47%), Gaps = 42/317 (13%)
Query: 45 GNLPPGFDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSSYGFIHYFDR 104
G L P D + RSV+ G + QV ++++ FS + + Y F+ F+
Sbjct: 88 GELEPWIDENFVRSVWFG-MGYQVNVKMIRDKFSGS------------NAGYCFVD-FEN 133
Query: 105 RSAAMAILSLNGRHL--FGQPIKVNWAYASG----QREDTSGHFNIFVGDLSPEVTDATL 158
AA L LNG+ + + K+NWA G R+D ++IFVGDL PEV + L
Sbjct: 134 PDAAGRALQLNGQVIPNSNRQFKLNWASGGGLADRSRDDRGPEYSIFVGDLGPEVNEYVL 193
Query: 159 FACF-SVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNW 217
+ F + YPSC A++M D +G SRG+GFV F ++QD Q A++++ G + G+R +R +
Sbjct: 194 MSLFQNKYPSCKSAKIMSDPISGMSRGYGFVRFADEQDQQKALHEMQGVYCGNRPMRIST 253
Query: 218 AT-----------KGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPE-----NNPQ 261
AT G A ++ S AP+ +P
Sbjct: 254 ATPKNKSGGAAVPPGGMPQPGMPGGPAAGGPQMPGMYSMGAPPMGYYGAPQPMNQFTDPN 313
Query: 262 YTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGN 321
TTV+VG L+ VT+ +L F G G I V++ KG GFV++ A +AI N
Sbjct: 314 NTTVFVGGLSGYVTEDELRSFFQ--GFGEITYVKIPPGKGCGFVQFVQRHAAEMAI---N 368
Query: 322 TTQSSYLFGKQMKCSWG 338
Q + +++ SWG
Sbjct: 369 QMQGYPIGNSRVRLSWG 385
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/222 (22%), Positives = 94/222 (42%), Gaps = 42/222 (18%)
Query: 144 IFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDL 203
+++G+L P + + + + + + +++ D+ +G + G+ FV F N A A+ L
Sbjct: 85 LWMGELEPWIDENFVRSVWFGMGYQVNVKMIRDKFSGSNAGYCFVDFENPDAAGRALQ-L 143
Query: 204 TGKWL--GSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQ 261
G+ + +RQ + NWA+ G L + S +D P+
Sbjct: 144 NGQVIPNSNRQFKLNWASGGG----------------LADRSRDD-----------RGPE 176
Query: 262 YTTVYVGNLAPEVTQLDLHRHFHSL-----GAGVIEEVRVQRDKGFGFVRYSTHAEAALA 316
Y+ ++VG+L PEV + L F + A ++ + +G+GFVR++ + A
Sbjct: 177 YS-IFVGDLGPEVNEYVLMSLFQNKYPSCKSAKIMSDPISGMSRGYGFVRFADEQDQQKA 235
Query: 317 IQMGNTTQSSYLFGKQMKCSWGSKPTPPGTSSNPLPPPAAAP 358
+ + Q Y + M+ S TP S PP P
Sbjct: 236 L---HEMQGVYCGNRPMRIS---TATPKNKSGGAAVPPGGMP 271
>gi|429854847|gb|ELA29832.1| mRNA binding post-transcriptional regulator, partial
[Colletotrichum gloeosporioides Nara gc5]
Length = 366
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 102/325 (31%), Positives = 159/325 (48%), Gaps = 36/325 (11%)
Query: 42 IPSGNLPPGFDPSTCRSVYVGNIHTQVTEPLLQEVF-SSTGPVEGCKLIRKDKSS----Y 96
IP G P D + ++++G + + E ++ VF ++TG K+IR DK+S Y
Sbjct: 43 IPGGQAPIQGD-ANKNTLWMGELEPWMDENFIKGVFLTATGEPVNVKVIR-DKTSGNAGY 100
Query: 97 GFIHYFDRRSAAMAILSLNGRHL--FGQPIKVNWAYASG---QREDTSGHFNIFVGDLSP 151
F+ F AA L LNG + + K+NWA G +R+D ++IFVGDL P
Sbjct: 101 CFVE-FTSSDAASKALQLNGTPVPNSNRAFKLNWASGGGINDRRDDRGPEYSIFVGDLGP 159
Query: 152 EVTDATLFACFSV-YPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGS 210
EV + L + F +PSC A++M D +G+SRG+GFV F ++QD Q A+ ++ G + G+
Sbjct: 160 EVNEYVLVSLFQARFPSCKSAKIMTDAMSGQSRGYGFVRFTDEQDQQRALVEMQGVYCGN 219
Query: 211 RQIRCNWATKGAGNNEDKQSSDAKSVV-------ELTNGSSEDGKETTNTEAPEN----- 258
R +R + AT N+ Q + + + G + AP N
Sbjct: 220 RPMRISTATPKNRNHGPYQHHGNQMMAPGLPPHQQGFYGVPSPAQYGGAYGAPYNPPGQQ 279
Query: 259 -----NPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEA 313
+P TTV+VG L+ VT+ +L F G G I V++ KG GFV++ A
Sbjct: 280 MNQFTDPNNTTVFVGGLSGYVTEDELRSFFQ--GFGEITYVQIPPGKGCGFVQFVHRHAA 337
Query: 314 ALAIQMGNTTQSSYLFGKQMKCSWG 338
+AI N Q + +++ SWG
Sbjct: 338 EMAI---NQMQGYPIGNSRVRLSWG 359
>gi|169616740|ref|XP_001801785.1| hypothetical protein SNOG_11545 [Phaeosphaeria nodorum SN15]
gi|111060133|gb|EAT81253.1| hypothetical protein SNOG_11545 [Phaeosphaeria nodorum SN15]
Length = 408
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 102/327 (31%), Positives = 158/327 (48%), Gaps = 41/327 (12%)
Query: 43 PSGNL-PPGF-----DPSTCRS-VYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS 95
P GN+ PPG PS ++ +++G + + E ++ ++ + G K+IR DK S
Sbjct: 40 PQGNMGPPGSAGGDGQPSAGKTTLWMGELEPWIDENFVRSIWYNMGETVNVKMIR-DKFS 98
Query: 96 ----YGFIHYFDRRSAAMAILSLNGRHL--FGQPIKVNWAYASG----QREDTSGHFNIF 145
Y F+ + +AA A LSLNG+ + +P K+NWA G R++ ++IF
Sbjct: 99 GNAGYCFVDFSTPEAAAKA-LSLNGQLIPNSNRPFKLNWASGGGLADRSRDERGPEYSIF 157
Query: 146 VGDLSPEVTDATLFACF-SVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLT 204
VGDL PEVT+ L F + Y S A++M D +G SRG+GFV F ++ D Q A+ D+
Sbjct: 158 VGDLGPEVTEFVLVQLFQNKYRSTKSAKIMSDPISGMSRGYGFVRFADEADQQKALTDMQ 217
Query: 205 GKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPE------- 257
G + G+R +R + AT N+ + G G + AP
Sbjct: 218 GVYCGNRPMRISTATP---KNKSGGPGGPGGMGMQQGGPGGPGMGMYSMGAPPMGYYGAP 274
Query: 258 ------NNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHA 311
+P TTV+VG L+ VT+ +L F G G I V++ KG GFV++
Sbjct: 275 QPMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQ--GFGEITYVKIPPGKGCGFVQFVQRH 332
Query: 312 EAALAIQMGNTTQSSYLFGKQMKCSWG 338
A +AI N Q + +++ SWG
Sbjct: 333 AAEMAI---NQMQGYPIGNSRVRLSWG 356
>gi|154296254|ref|XP_001548559.1| hypothetical protein BC1G_12954 [Botryotinia fuckeliana B05.10]
Length = 409
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 99/308 (32%), Positives = 147/308 (47%), Gaps = 34/308 (11%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS----YGFIHYFDRRSAAMAILS 113
++++G + + E ++ V+ G K+IR DK S Y FI F +AA LS
Sbjct: 73 TLWMGELEPWIDENFIRSVWFGMGEQVNVKMIR-DKFSGNAGYCFID-FTSPAAAAKALS 130
Query: 114 LNGRHL--FGQPIKVNWAYASG---QREDTSGHFNIFVGDLSPEVTDATLFACFSV-YPS 167
LNG + +P K+NWA G +R+D F+IFVGDL PEV + L + F +PS
Sbjct: 131 LNGSMIPNTTRPFKLNWASGGGLADRRDDRGPEFSIFVGDLGPEVNEYVLVSLFQARFPS 190
Query: 168 CSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT-----KGA 222
C A++M D +G SRG+GFV F + D Q A+ ++ G + G+R +R + AT GA
Sbjct: 191 CKSAKIMTDPISGMSRGYGFVRFAEEGDQQRALTEMQGVYCGNRPMRISTATPKNKSGGA 250
Query: 223 G---------NNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPEN---NPQYTTVYVGNL 270
G + + G T P N +P TTV+VG L
Sbjct: 251 GPAGMQMQGGGGGGMPGAMGGAPGMYGMGGGPPMAGYYGTPQPMNQFTDPNNTTVFVGGL 310
Query: 271 APEVTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFG 330
+ VT+ +L F G G I V++ KG GFV++ A +AI N Q +
Sbjct: 311 SGYVTEDELRSFFQ--GFGEITYVKIPPGKGCGFVQFVQRHAAEMAI---NQMQGYPIGN 365
Query: 331 KQMKCSWG 338
+++ SWG
Sbjct: 366 SRVRLSWG 373
>gi|350295821|gb|EGZ76798.1| RNA-binding domain-containing protein [Neurospora tetrasperma FGSC
2509]
Length = 523
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 98/306 (32%), Positives = 149/306 (48%), Gaps = 30/306 (9%)
Query: 57 RSVYVGNIHTQVTEPLLQEVFSST-GPVEGCKLIRKDKSS---YGFIHYFDRRSAAMAIL 112
+++++G + + E ++ VF++ G K+IR S Y FI F AA L
Sbjct: 75 KTLWMGEMEGWMDENFIKNVFTTVLGETVQVKVIRDRNSGNAGYCFIE-FATPEAAQKAL 133
Query: 113 SLNGRHL--FGQPIKVNWAYASG---QREDTSGHFNIFVGDLSPEVTDATLFACF-SVYP 166
+LNG + + K+NWA G +R+D ++IFVGDL PEV + L + F S +P
Sbjct: 134 NLNGTPVPNSNRAFKLNWASGGGLIDRRDDRGPEYSIFVGDLGPEVNEFVLVSLFQSRFP 193
Query: 167 SCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATK------ 220
SC A++M D TG+SRG+GFV F ++ D Q A+ ++ G + G+R +R + AT
Sbjct: 194 SCKSAKIMTDAMTGQSRGYGFVRFSDEGDQQRALVEMQGVYCGNRPMRISTATPKTRTHQ 253
Query: 221 -GAGNNEDKQSSDAKSVVELTN----GSSEDGKETTNTEAPEN---NPQYTTVYVGNLAP 272
GA A TN + N P N +P TTV+VG L+
Sbjct: 254 YGAHAPHAANPMMAPVPAHATNLQWGVPPQPYYSGFNPMQPMNQFTDPNNTTVFVGGLSG 313
Query: 273 EVTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQ 332
VT+ +L F G G I V++ KG GFV++ A +AI N Q + +
Sbjct: 314 YVTEDELRSFFQ--GFGEITYVKIPPGKGCGFVQFVHRHAAEMAI---NQMQGYPIGNSR 368
Query: 333 MKCSWG 338
++ SWG
Sbjct: 369 VRLSWG 374
>gi|70982362|ref|XP_746709.1| mRNA binding post-transcriptional regulator (Csx1) [Aspergillus
fumigatus Af293]
gi|66844333|gb|EAL84671.1| mRNA binding post-transcriptional regulator (Csx1), putative
[Aspergillus fumigatus Af293]
gi|159123048|gb|EDP48168.1| mRNA binding post-transcriptional regulator (Csx1), putative
[Aspergillus fumigatus A1163]
Length = 418
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 92/298 (30%), Positives = 146/298 (48%), Gaps = 25/298 (8%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRK----DKSSYGFIHYFDRRSAAMAILS 113
++++G + + E ++ ++ G K+IR + Y F+ F +AA LS
Sbjct: 68 TLWMGELEPWIDENFIRNLWFQMGEQVNVKMIRDKFSGSNAGYCFVD-FSSPAAAAKALS 126
Query: 114 LNGRHL--FGQPIKVNWAYASG----QREDTSGHFNIFVGDLSPEVTDATLFACF-SVYP 166
LNG + + K+NWA G R+D ++IFVGDL PEV + L + F + +P
Sbjct: 127 LNGTPMPNTNRVFKLNWATGGGLADRSRDDRGPEYSIFVGDLGPEVNEYVLVSLFQNRFP 186
Query: 167 SCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT---KGAG 223
SC A++M D +G SRG+GFV F ++ D Q A+ ++ G + G+R +R + AT KG G
Sbjct: 187 SCKSAKIMTDPISGMSRGYGFVRFSDENDQQRALTEMQGVYCGNRPMRISTATPKNKGPG 246
Query: 224 NNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPEN---NPQYTTVYVGNLAPEVTQLDLH 280
+ + G+ G P N +P TTV+VG L+ VT+ +L
Sbjct: 247 VVPGAMGMPGPAGMYPPMGAPPMG--FYGAPQPMNQFTDPNNTTVFVGGLSGYVTEDELR 304
Query: 281 RHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWG 338
F G G I V++ KG GFV++ A +AI N Q + +++ SWG
Sbjct: 305 SFFQ--GFGEITYVKIPPGKGCGFVQFVQRHAAEMAI---NQMQGYPIGNSRVRLSWG 357
>gi|356557398|ref|XP_003547003.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
[Glycine max]
Length = 404
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 91/298 (30%), Positives = 145/298 (48%), Gaps = 28/298 (9%)
Query: 58 SVYVG-NIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS----YGFIHYFDRRSAAMAIL 112
SV +G + T V E L F+ G V K+IR + + YGF+ + +A +
Sbjct: 4 SVRLGCGLRTAVDEAYLSHCFAPAGEVVSIKIIRNELTGQPEGYGFVEFVSHATAERVLQ 63
Query: 113 SLNGRHLFGQPIKVNWA-YASGQRE-DTSGHFNIFVGDLSPEVTDATLFACFSV-YPSCS 169
+ N Q ++NWA + G+R D + +IFVGDL+P++TD L F YPS
Sbjct: 64 TYNATD---QTFRLNWASFGIGERRPDAALEHSIFVGDLAPDITDYLLQEMFRAHYPSVR 120
Query: 170 DARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQ 229
A+V+ D TGRS+G+GFV F ++ + A+ ++ G + +R +R + AT K+
Sbjct: 121 GAKVVSDPNTGRSKGYGFVKFSDENERNRAMTEMNGVYCSTRPMRISAATP-------KK 173
Query: 230 SSDAKSVVELTNGSSEDGKE-----TTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFH 284
++ A + + PE + T ++VGNL V++ +L ++F
Sbjct: 174 TTSAYAAPAAPVPKPVYPVPAYTAPVVQVQPPEYDVNNTAIFVGNLDLNVSEEELKQNF- 232
Query: 285 SLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSKPT 342
L G I V+VQ KG GFV++ T A A AIQ Q + + ++ SWG T
Sbjct: 233 -LQFGEIVSVKVQSGKGCGFVQFGTRASAEEAIQ---KMQEKMIGQQVVRISWGRTLT 286
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 85/204 (41%), Gaps = 47/204 (23%)
Query: 52 DPSTCRSVYVGNIHTQVTEPLLQEVFSSTGP-VEGCKLIRKDKS----SYGFIHYFDRRS 106
D + S++VG++ +T+ LLQE+F + P V G K++ + YGF+ + D
Sbjct: 87 DAALEHSIFVGDLAPDITDYLLQEMFRAHYPSVRGAKVVSDPNTGRSKGYGFVKFSDENE 146
Query: 107 AAMAILSLNGRHLFGQPIKVNWAYASGQREDTSGHFN----------------------- 143
A+ +NG + +P++++ A+ ++ TS +
Sbjct: 147 RNRAMTEMNGVYCSTRPMRIS---AATPKKTTSAYAAPAAPVPKPVYPVPAYTAPVVQVQ 203
Query: 144 ----------IFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQ 193
IFVG+L V++ L F + +V +G GFV F +
Sbjct: 204 PPEYDVNNTAIFVGNLDLNVSEEELKQNFLQFGEIVSVKVQ------SGKGCGFVQFGTR 257
Query: 194 QDAQSAINDLTGKWLGSRQIRCNW 217
A+ AI + K +G + +R +W
Sbjct: 258 ASAEEAIQKMQEKMIGQQVVRISW 281
Score = 41.2 bits (95), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 46/93 (49%), Gaps = 3/93 (3%)
Query: 48 PPGFDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSSYGFIHYFDRRSA 107
PP +D + +++VGN+ V+E L++ F G + K+ + GF+ + R SA
Sbjct: 204 PPEYDVNNT-AIFVGNLDLNVSEEELKQNFLQFGEIVSVKV--QSGKGCGFVQFGTRASA 260
Query: 108 AMAILSLNGRHLFGQPIKVNWAYASGQREDTSG 140
AI + + + Q ++++W R+D G
Sbjct: 261 EEAIQKMQEKMIGQQVVRISWGRTLTARQDLPG 293
>gi|302794528|ref|XP_002979028.1| hypothetical protein SELMODRAFT_418663 [Selaginella moellendorffii]
gi|302806386|ref|XP_002984943.1| hypothetical protein SELMODRAFT_424039 [Selaginella moellendorffii]
gi|300147529|gb|EFJ14193.1| hypothetical protein SELMODRAFT_424039 [Selaginella moellendorffii]
gi|300153346|gb|EFJ19985.1| hypothetical protein SELMODRAFT_418663 [Selaginella moellendorffii]
Length = 408
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 99/318 (31%), Positives = 153/318 (48%), Gaps = 42/318 (13%)
Query: 53 PSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS----YGFIHYFDRRSAA 108
P ++++VG++ + E L +FSSTG + K+IR S YGF+ + A
Sbjct: 16 PIDMKTLWVGDLQYWMDESYLNSIFSSTGELVSAKIIRNKASGFPEGYGFVEFASHACAE 75
Query: 109 MAILSLNGRHL--FGQPIKVNWAY-ASGQREDTSGHFN-IFVGDLSPEVTDATLFACFSV 164
+ + G + Q ++NWAY G+R G N IFVGDL+P+VTD L F
Sbjct: 76 RVLTAFTGTQMPQTEQLFRLNWAYFGIGERRPEGGPENSIFVGDLAPDVTDYMLQETFRT 135
Query: 165 -YPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAG 223
YPS A+V+ D TGRS+G+GFV F + + A++++ G + SR +R N AT
Sbjct: 136 RYPSVRGAKVVTDVATGRSKGYGFVRFADDSERVRAMSEMNGIYCSSRPMRINAATPKKA 195
Query: 224 NNEDKQSSDAKSVVELTNGSSEDGKETTNTEAP------ENNPQYTTVYVGNLAPEVTQL 277
L + K TT +P +N+P TT++VG L P V++
Sbjct: 196 ---------------LIPSAPAPQKVTTFATSPLQNVPNDNDPNNTTIFVGGLDPAVSEE 240
Query: 278 DLHRHFHSLGAGVIEEVRVQRDKGFGFVRYS--THAEAALAIQMGNTTQSSYLFGKQMKC 335
+L + F G V V++ KG GFV+++ + AE AL G + + ++
Sbjct: 241 ELQKTFGEFGELVY--VKIPPGKGCGFVQFTHRSCAEEALGKLHGTMIRQ-----QAIRL 293
Query: 336 SWG---SKPTPPGTSSNP 350
SWG +K P G +P
Sbjct: 294 SWGRTANKQYPAGWGGDP 311
>gi|194697962|gb|ACF83065.1| unknown [Zea mays]
gi|414885795|tpg|DAA61809.1| TPA: hypothetical protein ZEAMMB73_995180 [Zea mays]
Length = 320
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 100/330 (30%), Positives = 149/330 (45%), Gaps = 58/330 (17%)
Query: 68 VTEPLLQEVFSSTGPVEGCKLIRKDKSS----YGFIHYFDRRSAAMAILSLNGRHLF--- 120
+ E L F TG V K+IR ++ YGF+ ++ +A + +G H+
Sbjct: 1 MDENYLHSCFGYTGEVVAIKVIRNKQTGQSEGYGFVEFYSHAAAEKVLEGFSG-HIMPNT 59
Query: 121 GQPIKVNWAYAS--GQREDTSGHFNIFVGDLSPEVTDATLFACFSV-YPSCSDARVMWDQ 177
QP ++NWA S +R D++ +IFVGDL+ +V DATL FS Y S A+V+ D
Sbjct: 60 DQPFRLNWASFSMGDRRSDSASDHSIFVGDLASDVNDATLLEAFSSRYSSVKGAKVVIDA 119
Query: 178 KTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVV 237
TGRS+G+GFV F + + A+ ++ G + SR +R AT + + A
Sbjct: 120 NTGRSKGYGFVRFGDDSEKTQAMTEMNGVYCSSRPMRIGPATPRKSSGTSGSNGSA---- 175
Query: 238 ELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQ 297
+ DG + TN TTV+VG L P V++ DL + F G I V++
Sbjct: 176 -----ARSDGGDLTN----------TTVFVGGLDPNVSEEDLRQTFSQYGE--ISSVKIP 218
Query: 298 RDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQ-MKCSWGSKP--------------- 341
K GFV+++ A A+Q N + GKQ ++ SWG P
Sbjct: 219 IGKQCGFVQFAQRKNAEDALQGLNGS----TIGKQNVRLSWGRNPANKQFRGDNGNQWNN 274
Query: 342 ------TPPGTSSNPLPPPAAAPIPGLSAA 365
PP + P A P PG+ AA
Sbjct: 275 GGMYYAAPPFYNGYGYPAAAPFPDPGMYAA 304
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 85/185 (45%), Gaps = 24/185 (12%)
Query: 52 DPSTCRSVYVGNIHTQVTEPLLQEVFSST-GPVEGCKLIRKDKS----SYGFIHYFDRRS 106
D ++ S++VG++ + V + L E FSS V+G K++ + YGF+ + D
Sbjct: 78 DSASDHSIFVGDLASDVNDATLLEAFSSRYSSVKGAKVVIDANTGRSKGYGFVRFGDDSE 137
Query: 107 AAMAILSLNGRHLFGQPIKVNWA-----------YASGQREDTSGHFN--IFVGDLSPEV 153
A+ +NG + +P+++ A S R D N +FVG L P V
Sbjct: 138 KTQAMTEMNGVYCSSRPMRIGPATPRKSSGTSGSNGSAARSDGGDLTNTTVFVGGLDPNV 197
Query: 154 TDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQI 213
++ L FS Y S ++ ++ GFV F +++A+ A+ L G +G + +
Sbjct: 198 SEEDLRQTFSQYGEISSVKIPIGKQC------GFVQFAQRKNAEDALQGLNGSTIGKQNV 251
Query: 214 RCNWA 218
R +W
Sbjct: 252 RLSWG 256
>gi|357149687|ref|XP_003575198.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
[Brachypodium distachyon]
Length = 421
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 93/295 (31%), Positives = 143/295 (48%), Gaps = 37/295 (12%)
Query: 57 RSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS----YGFIHYFDRRSAAMAIL 112
R+++VG++ + E L F +G V K+IR S YGF+ ++ SA A+
Sbjct: 99 RTIWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEKALQ 158
Query: 113 SLNGRHL--FGQPIKVNWA-YASGQ-REDTSGHFNIFVGDLSPEVTDATLFACFS-VYPS 167
+ G + + K+NWA Y+ G+ R + + +IFVGDL+ +VTD L F+ Y S
Sbjct: 159 NFAGHVMPNTDRAFKLNWASYSVGEKRSELASDHSIFVGDLAVDVTDDMLMELFANKYRS 218
Query: 168 CSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNED 227
A+V+ D TGRSRG+GFV F + D A+ ++ G + +R IR AT + +
Sbjct: 219 VKGAKVIIDANTGRSRGYGFVRFGDDNDRTHAMTEMNGVYCSTRPIRIGPATPRRTSGDS 278
Query: 228 KQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLG 287
S +S +LTN TVYVG L P V++ +L + F G
Sbjct: 279 GSSPPRQSDGDLTN---------------------RTVYVGGLDPNVSEDELRKTFAKYG 317
Query: 288 AGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQ-MKCSWGSKP 341
+ V++ K GFV++ A+A A+Q S GKQ ++ SWG P
Sbjct: 318 D--VASVKIPVGKQCGFVQFVNRADAEEALQ----ALSGSTIGKQAVRLSWGRSP 366
>gi|212546039|ref|XP_002153173.1| mRNA binding post-transcriptional regulator (Csx1), putative
[Talaromyces marneffei ATCC 18224]
gi|210064693|gb|EEA18788.1| mRNA binding post-transcriptional regulator (Csx1), putative
[Talaromyces marneffei ATCC 18224]
Length = 392
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 90/298 (30%), Positives = 146/298 (48%), Gaps = 23/298 (7%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRK----DKSSYGFIHYFDRRSAAMAILS 113
++++G + + E ++ ++ G K+IR + Y F+ F +AA LS
Sbjct: 60 TLWMGELEPWIDENFIRNLWFQMGEQVNVKMIRDKFSGSNAGYCFVD-FSSAAAAGKALS 118
Query: 114 LNGRHL--FGQPIKVNWAYASG----QREDTSGHFNIFVGDLSPEVTDATLFACF-SVYP 166
LNG + + K+NWA G R++ ++IFVGDL PEV + L + F S +P
Sbjct: 119 LNGTPMPNTTRAFKLNWATGGGLADRGRDERGPEYSIFVGDLGPEVNEYVLVSLFQSRFP 178
Query: 167 SCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT-KGAGNN 225
SC A++M D +G SRG+GFV F ++ D Q A++++ G + G+R +R + AT K G
Sbjct: 179 SCKSAKIMTDPISGMSRGYGFVRFSDENDQQRALSEMQGVYCGNRPMRISTATPKNKGPG 238
Query: 226 EDKQSSDAKSVVELTNGSSEDGKETTNTEAPE-----NNPQYTTVYVGNLAPEVTQLDLH 280
+ ++ G AP+ +P TTV+VG L+ VT+ +L
Sbjct: 239 VGPGGMGMPGPAGIYPPAAMGGPPMGFYGAPQPMNQFTDPNNTTVFVGGLSGYVTEDELR 298
Query: 281 RHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWG 338
F G G I V++ KG GFV++ A +AI N Q + +++ SWG
Sbjct: 299 SFFQ--GFGEITYVKIPPGKGCGFVQFVQRHAAEMAI---NQMQGYPIGNSRVRLSWG 351
>gi|380478379|emb|CCF43635.1| RNA recognition domain-containing protein, partial [Colletotrichum
higginsianum]
Length = 419
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 98/328 (29%), Positives = 154/328 (46%), Gaps = 38/328 (11%)
Query: 42 IPSGNLPPGFDPSTCRSVYVGNIHTQVTEPLLQEVF-SSTGPVEGCKLIRKDKSS----Y 96
IP G P + ++++G + + E ++ VF ++TG K+IR DK+S Y
Sbjct: 44 IPGGVQAPNQQDANKNTLWMGELEPWMDENFIKGVFLTATGEPVNVKVIR-DKTSGNAGY 102
Query: 97 GFIHYFDRRSAAMAILSLNGRHL--FGQPIKVNWAYASG---QREDTSGHFNIFVGDLSP 151
F+ F AA L LNG + + K+NWA G +R+D ++IFVGDL P
Sbjct: 103 CFVE-FSSSDAASKALGLNGTPVPNSNRAFKLNWASGGGINDRRDDRGPEYSIFVGDLGP 161
Query: 152 EVTDATLFACFSV-YPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGS 210
EV + L + F +PSC A++M D +G+SRG+GFV F ++QD Q A+ ++ G + G+
Sbjct: 162 EVNEYVLVSLFQARFPSCKSAKIMTDAMSGQSRGYGFVRFTDEQDQQRALVEMQGVYCGN 221
Query: 211 RQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPE------------- 257
R +R + AT +N + G + +P
Sbjct: 222 RPMRISTATPKNRSNHGGPYQQHHGNQMMAPGLPPHQQGFYGVPSPAQYGGAYGAPYNPP 281
Query: 258 -------NNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTH 310
+P TTV+VG L+ VT+ +L F G G I V++ KG GFV++
Sbjct: 282 GQQMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQ--GFGEITYVKIPPGKGCGFVQFVHR 339
Query: 311 AEAALAIQMGNTTQSSYLFGKQMKCSWG 338
A +AI N Q + +++ SWG
Sbjct: 340 HAAEMAI---NQMQGYPIGNSRVRLSWG 364
>gi|224286528|gb|ACN40970.1| unknown [Picea sitchensis]
Length = 430
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 90/297 (30%), Positives = 145/297 (48%), Gaps = 28/297 (9%)
Query: 56 CRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS----YGFIHYFDRRSAAMAI 111
++++VG++ + E L FS TG + K+IR + YGF+ + R +A +
Sbjct: 91 VKTLWVGDLQFWMDEGYLHTCFSHTGELVSAKIIRNKYTGQSEGYGFMEFITRTAAEKIM 150
Query: 112 LSLNGRHL--FGQPIKVNWA-YASGQRE-DTSGHFNIFVGDLSPEVTDATLFACF-SVYP 166
+ NG + Q ++NWA ++ G+R D F+IFVGDL +V+D L F S Y
Sbjct: 151 QTYNGTLMPNTEQVFRMNWATFSMGERRLDGGPDFSIFVGDLDSDVSDLVLQETFQSRYS 210
Query: 167 SCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT--KGAGN 224
S A+V+ D TGRS+G+GFV F + + A+ ++ G + +R +R + AT K AG
Sbjct: 211 SVKAAKVVMDANTGRSKGYGFVRFGEESERARAMTEMNGVYCSTRPMRISAATPRKSAG- 269
Query: 225 NEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFH 284
V +G + +G +N+ TT++VG L P T DL + F
Sbjct: 270 -----------VQHQYSGRAGNGGSHAQGFPSDNDLNNTTIFVGRLDPNATDEDLRQVFG 318
Query: 285 SLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSKP 341
G V V++ KG GFV++ A A A+Q + + + ++ SWG P
Sbjct: 319 QYGELV--SVKIPVGKGCGFVQFGNRASAEEALQ---RLHGTVIRQQTVRLSWGRSP 370
>gi|336463751|gb|EGO51991.1| hypothetical protein NEUTE1DRAFT_149626 [Neurospora tetrasperma
FGSC 2508]
Length = 491
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 98/306 (32%), Positives = 149/306 (48%), Gaps = 30/306 (9%)
Query: 57 RSVYVGNIHTQVTEPLLQEVFSST-GPVEGCKLIRKDKSS---YGFIHYFDRRSAAMAIL 112
+++++G + + E ++ VF++ G K+IR S Y FI F AA L
Sbjct: 43 KTLWMGEMEGWMDENFIKNVFTTVLGETVQVKVIRDRNSGNAGYCFIE-FATPEAAQKAL 101
Query: 113 SLNGRHL--FGQPIKVNWAYASG---QREDTSGHFNIFVGDLSPEVTDATLFACF-SVYP 166
+LNG + + K+NWA G +R+D ++IFVGDL PEV + L + F S +P
Sbjct: 102 NLNGTPVPNSNRAFKLNWASGGGLIDRRDDRGPEYSIFVGDLGPEVNEFVLVSLFQSRFP 161
Query: 167 SCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATK------ 220
SC A++M D TG+SRG+GFV F ++ D Q A+ ++ G + G+R +R + AT
Sbjct: 162 SCKSAKIMTDAMTGQSRGYGFVRFSDEGDQQRALVEMQGVYCGNRPMRISTATPKTRTHQ 221
Query: 221 -GAGNNEDKQSSDAKSVVELTN----GSSEDGKETTNTEAPEN---NPQYTTVYVGNLAP 272
GA A TN + N P N +P TTV+VG L+
Sbjct: 222 YGAHAPHAANPMMAPVPAHATNLQWGVPPQPYYSGFNPMQPMNQFTDPNNTTVFVGGLSG 281
Query: 273 EVTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQ 332
VT+ +L F G G I V++ KG GFV++ A +AI N Q + +
Sbjct: 282 YVTEDELRSFFQ--GFGEITYVKIPPGKGCGFVQFVHRHAAEMAI---NQMQGYPIGNSR 336
Query: 333 MKCSWG 338
++ SWG
Sbjct: 337 VRLSWG 342
>gi|367053249|ref|XP_003657003.1| hypothetical protein THITE_2132116 [Thielavia terrestris NRRL 8126]
gi|347004268|gb|AEO70667.1| hypothetical protein THITE_2132116 [Thielavia terrestris NRRL 8126]
Length = 396
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 96/306 (31%), Positives = 155/306 (50%), Gaps = 29/306 (9%)
Query: 56 CRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS----YGFIHYFDRRSAAMAI 111
+++++G + + E ++ VF + V+ + +D++S Y FI F AA
Sbjct: 40 AKTLWMGEMEGWMDENFIKNVFQTVLSVDVQVKVIRDRNSGNAGYCFIE-FPTPDAAQKA 98
Query: 112 LSLNGRHL--FGQPIKVNWAYASG---QREDTSGHFNIFVGDLSPEVTDATLFACF-SVY 165
L+LNG + + K+NWA G +R+D ++IFVGDL PEV + L + F S +
Sbjct: 99 LTLNGTPVPNSSRVFKLNWASGGGLVDRRDDRGPEYSIFVGDLGPEVNEFVLVSLFQSRF 158
Query: 166 PSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT-KGAGN 224
PSC A++M D TG+SRG+GFV F ++ + Q A+ ++ G + G+R +R + AT K +
Sbjct: 159 PSCKSAKIMTDAMTGQSRGYGFVRFSDESEQQRALVEMQGVYCGNRAMRISTATPKSRSH 218
Query: 225 NEDKQSSDAKSVVELTNGS--------SEDGKETTNTE-APEN---NPQYTTVYVGNLAP 272
A ++ G S G++ N AP N +P TTV+VG L+
Sbjct: 219 QFGHHGHGATQMMPPIAGHPGPMWGVPSYYGQQPFNQHIAPMNQFTDPNNTTVFVGGLSG 278
Query: 273 EVTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQ 332
VT+ +L F G G I V++ KG GFV++ A +AI N Q + +
Sbjct: 279 YVTEDELRSFFQ--GFGEITYVKIPPGKGCGFVQFVHRHAAEMAI---NQMQGYPIGNSR 333
Query: 333 MKCSWG 338
++ SWG
Sbjct: 334 VRLSWG 339
>gi|451993069|gb|EMD85544.1| hypothetical protein COCHEDRAFT_1035442 [Cochliobolus
heterostrophus C5]
Length = 409
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 94/307 (30%), Positives = 150/307 (48%), Gaps = 35/307 (11%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS----YGFIHYFDRRSAAMAILS 113
++++G + + E ++ ++ + G K+IR DK S Y F+ + +AA A L+
Sbjct: 65 TLWMGELEPWIDENFVRSIWYNMGETVNVKMIR-DKFSGNAGYCFVDFASPDAAAKA-LN 122
Query: 114 LNGRHL--FGQPIKVNWAYASGQ-------REDTSGHFNIFVGDLSPEVTDATLFACF-S 163
LNG+ + +P K+NWA G R++ F+IFVGDL PEVT+ L F +
Sbjct: 123 LNGQLIPNSNRPFKLNWASGGGLADRRQVIRDERGPEFSIFVGDLGPEVTEFVLVQLFQN 182
Query: 164 VYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAG 223
YPS A++M D +G SRG+GFV F +++D Q A+ ++ G + G+R +R + AT
Sbjct: 183 KYPSTKSAKIMSDPISGMSRGYGFVRFASEEDQQKALTEMQGVYCGNRPMRISTAT--PK 240
Query: 224 NNEDKQSSDAKSVVELTNGSSEDGKETTNTE-------APE-----NNPQYTTVYVGNLA 271
N + G G + AP+ +P TTV+VG L+
Sbjct: 241 NKSGGPGGPGGMGMPQGAGGPGMGMYSMGAPPMGNYYGAPQPMNQFTDPNNTTVFVGGLS 300
Query: 272 PEVTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGK 331
VT+ +L F G G I V++ KG GFV++ A +AI N Q +
Sbjct: 301 GYVTEDELRSFFQ--GFGEITYVKIPPGKGCGFVQFVQRHAAEMAI---NQMQGYPIGNS 355
Query: 332 QMKCSWG 338
+++ SWG
Sbjct: 356 RVRLSWG 362
>gi|302893889|ref|XP_003045825.1| hypothetical protein NECHADRAFT_66100 [Nectria haematococca mpVI
77-13-4]
gi|256726752|gb|EEU40112.1| hypothetical protein NECHADRAFT_66100 [Nectria haematococca mpVI
77-13-4]
Length = 408
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 93/303 (30%), Positives = 145/303 (47%), Gaps = 28/303 (9%)
Query: 58 SVYVGNIHTQVTEPLLQEVF-SSTGPVEGCKLIRKDKSS---YGFIHYFDRRSAAMAILS 113
++++G + + E ++ VF S+ G K+IR S Y F+ F AA L
Sbjct: 51 TLWMGELEPWMDENFIKGVFLSAAGETVNVKVIRDKNSGNAGYCFVE-FQSPDAATKALG 109
Query: 114 LNGRHL--FGQPIKVNWAYASG---QREDTSGHFNIFVGDLSPEVTDATLFACFSV-YPS 167
LNG + + K+NWA G +R+D ++IFVGDL PEV + L + F +PS
Sbjct: 110 LNGTPVPNSSRQFKLNWASGGGLVDRRDDRGPEYSIFVGDLGPEVNEYVLVSLFQARFPS 169
Query: 168 CSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT-------- 219
C A++M D +G+SRG+GFV F ++ D Q A+ ++ G + G+R +R + AT
Sbjct: 170 CKSAKIMTDAMSGQSRGYGFVRFSDENDQQRALVEMQGVYCGNRPMRISTATPKNRGNHG 229
Query: 220 --KGAGNNEDKQSSDAKSVVELTNGSS--EDGKETTNTEAPENNPQYTTVYVGNLAPEVT 275
G N ++ NG+ G +P TTV+VG L+ VT
Sbjct: 230 FGHGQHNGGPMMGGGVMPQQQMWNGAQGFYGGFNPATQMNQFTDPNNTTVFVGGLSGYVT 289
Query: 276 QLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKC 335
+ +L F G G I V++ KG GFV++ A +AI N Q + +++
Sbjct: 290 EDELRSFFQ--GFGEITYVKIPPGKGCGFVQFVHRHAAEMAI---NQMQGYPIGNSRVRL 344
Query: 336 SWG 338
SWG
Sbjct: 345 SWG 347
>gi|85115744|ref|XP_964924.1| hypothetical protein NCU00768 [Neurospora crassa OR74A]
gi|28926722|gb|EAA35688.1| conserved hypothetical protein [Neurospora crassa OR74A]
gi|38636412|emb|CAE81949.1| related to polyadenylate-binding protein [Neurospora crassa]
Length = 491
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 98/306 (32%), Positives = 149/306 (48%), Gaps = 30/306 (9%)
Query: 57 RSVYVGNIHTQVTEPLLQEVFSST-GPVEGCKLIRKDKSS---YGFIHYFDRRSAAMAIL 112
+++++G + + E ++ VF++ G K+IR S Y FI F AA L
Sbjct: 43 KTLWMGEMEGWMDENFIKNVFTTVLGETVQVKVIRDRNSGNAGYCFIE-FATPEAAQKAL 101
Query: 113 SLNGRHL--FGQPIKVNWAYASG---QREDTSGHFNIFVGDLSPEVTDATLFACF-SVYP 166
+LNG + + K+NWA G +R+D ++IFVGDL PEV + L + F S +P
Sbjct: 102 NLNGTPVPNSNRAFKLNWASGGGLIDRRDDRGPEYSIFVGDLGPEVNEFVLVSLFQSRFP 161
Query: 167 SCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATK------ 220
SC A++M D TG+SRG+GFV F ++ D Q A+ ++ G + G+R +R + AT
Sbjct: 162 SCKSAKIMTDAMTGQSRGYGFVRFSDEGDQQRALVEMQGVYCGNRPMRISTATPKTRTHQ 221
Query: 221 -GAGNNEDKQSSDAKSVVELTN----GSSEDGKETTNTEAPEN---NPQYTTVYVGNLAP 272
GA A TN + N P N +P TTV+VG L+
Sbjct: 222 YGAHAPHAANPMMAPVPAHATNLQWGVPPQPYYSGFNPMQPMNQFTDPNNTTVFVGGLSG 281
Query: 273 EVTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQ 332
VT+ +L F G G I V++ KG GFV++ A +AI N Q + +
Sbjct: 282 YVTEDELRSFFQ--GFGEITYVKIPPGKGCGFVQFVHRHAAEMAI---NQMQGYPIGNSR 336
Query: 333 MKCSWG 338
++ SWG
Sbjct: 337 VRLSWG 342
>gi|322705595|gb|EFY97180.1| mRNA binding post-transcriptional regulator [Metarhizium anisopliae
ARSEF 23]
Length = 390
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 101/331 (30%), Positives = 158/331 (47%), Gaps = 34/331 (10%)
Query: 32 GLLAAPQIEPIPSGNLPPGFDPSTCRS-VYVGNIHTQVTEPLLQEVF-SSTGPVEGCKLI 89
G AP + +P PP P ++ +++G + + E ++ VF S+ G K+I
Sbjct: 6 GTPPAPDMAAVP----PPAGGPEQPKTTLWMGELEPWMDENFIKGVFLSAAGETVNVKVI 61
Query: 90 RKDKSS---YGFIHYFDRRSAAMAILSLNGRHL--FGQPIKVNWAYASG---QREDTSGH 141
R S Y F+ F AA L LNG + + K+NWA G +R+D
Sbjct: 62 RDKNSGNAGYCFVE-FTTPEAATKALGLNGTPVPNSSRQFKLNWASGGGLVDRRDDRGPE 120
Query: 142 FNIFVGDLSPEVTDATLFACFSV-YPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAI 200
++IFVGDL PEV + L + F +PSC A++M D +G+SRG+GFV F ++ D Q A+
Sbjct: 121 YSIFVGDLGPEVNEYVLVSLFQARFPSCKSAKIMTDAMSGQSRGYGFVRFSDENDQQRAL 180
Query: 201 NDLTGKWLGSRQIRCNWAT-KGAGNNEDKQSSDAKSVVELTNGSSED-----------GK 248
++ G + G+R +R + AT K GN+ + G + G
Sbjct: 181 VEMQGVYCGNRPMRISTATPKNRGNHGFGGPGHHAGGAPMMGGVPQQPMWGGMQGFPYGG 240
Query: 249 ETTNTEAPE-NNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRY 307
T+ + +P TTV+VG L+ VT+ +L F G G I V++ KG GFV++
Sbjct: 241 YNPATQMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQ--GFGEITYVKIPPGKGCGFVQF 298
Query: 308 STHAEAALAIQMGNTTQSSYLFGKQMKCSWG 338
A +AI N Q + +++ SWG
Sbjct: 299 VHRHAAEMAI---NQMQGYPIGNSRVRLSWG 326
>gi|15220241|ref|NP_175181.1| RNA-binding protein 47C' [Arabidopsis thaliana]
gi|75337808|sp|Q9SX80.1|R47CP_ARATH RecName: Full=Polyadenylate-binding protein RBP47C';
Short=Poly(A)-binding protein RBP47C'; AltName:
Full=RNA-binding protein 47C'; Short=AtRBP47C prime;
Short=AtRBP47C'
gi|5668811|gb|AAD46037.1|AC007519_22 Contains 3 PF|00076 RNA recognition motif domains. EST gb|T20424
comes from this gene [Arabidopsis thaliana]
gi|110743035|dbj|BAE99410.1| hypothetical protein [Arabidopsis thaliana]
gi|124301030|gb|ABN04767.1| At1g47500 [Arabidopsis thaliana]
gi|332194057|gb|AEE32178.1| RNA-binding protein 47C' [Arabidopsis thaliana]
Length = 434
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 93/298 (31%), Positives = 144/298 (48%), Gaps = 34/298 (11%)
Query: 57 RSVYVGNIHTQVTEPLLQEVFSSTGPVE--GCKLIRKDKSS----YGFIHYFDRRSAAMA 110
++++VG++ + E L F+S E K+IR + YGF+ + A
Sbjct: 103 KTIWVGDLQNWMDEAYLNSAFTSAEEREIVSLKVIRNKHNGSSEGYGFVEFESHDVADKV 162
Query: 111 ILSLNGRHL--FGQPIKVNWA-YASGQR--EDTSGHFNIFVGDLSPEVTDATLFACFS-V 164
+ NG + QP ++NWA +++G++ E+ +IFVGDL+P+V+DA L FS
Sbjct: 163 LQEFNGAPMPNTDQPFRLNWASFSTGEKRLENNGPDLSIFVGDLAPDVSDALLHETFSEK 222
Query: 165 YPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGN 224
YPS A+V+ D TGRS+G+GFV F ++ + A+ ++ G SR +R AT N
Sbjct: 223 YPSVKAAKVVLDANTGRSKGYGFVRFGDENERTKAMTEMNGVKCSSRAMRIGPATPRKTN 282
Query: 225 NEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFH 284
+Q G T +E N TT++VG L VT DL + F
Sbjct: 283 GYQQQ------------GGYMPSGAFTRSEGDTIN---TTIFVGGLDSSVTDEDLKQPFS 327
Query: 285 SLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQ-MKCSWGSKP 341
G I V++ KG GFV++ A A++ N T + GKQ ++ SWG P
Sbjct: 328 EFGE--IVSVKIPVGKGCGFVQFVNRPNAEEALEKLNGT----VIGKQTVRLSWGRNP 379
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 80/187 (42%), Gaps = 28/187 (14%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGP-VEGCKLIRKDKSS----YGFIHYFDRRSAAMAIL 112
S++VG++ V++ LL E FS P V+ K++ + YGF+ + D A+
Sbjct: 200 SIFVGDLAPDVSDALLHETFSEKYPSVKAAKVVLDANTGRSKGYGFVRFGDENERTKAMT 259
Query: 113 SLNGRHLFGQPIKVNWAY-----------------ASGQREDTSGHFNIFVGDLSPEVTD 155
+NG + +++ A A + E + + IFVG L VTD
Sbjct: 260 EMNGVKCSSRAMRIGPATPRKTNGYQQQGGYMPSGAFTRSEGDTINTTIFVGGLDSSVTD 319
Query: 156 ATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRC 215
L FS + ++ +G GFV F N+ +A+ A+ L G +G + +R
Sbjct: 320 EDLKQPFSEFGEIVSVKIP------VGKGCGFVQFVNRPNAEEALEKLNGTVIGKQTVRL 373
Query: 216 NWATKGA 222
+W A
Sbjct: 374 SWGRNPA 380
Score = 38.9 bits (89), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 22/88 (25%), Positives = 44/88 (50%), Gaps = 2/88 (2%)
Query: 42 IPSGNLPPGFDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSSYGFIHY 101
+PSG + +++VG + + VT+ L++ FS G + K+ GF+ +
Sbjct: 291 MPSGAFTRSEGDTINTTIFVGGLDSSVTDEDLKQPFSEFGEIVSVKI--PVGKGCGFVQF 348
Query: 102 FDRRSAAMAILSLNGRHLFGQPIKVNWA 129
+R +A A+ LNG + Q ++++W
Sbjct: 349 VNRPNAEEALEKLNGTVIGKQTVRLSWG 376
>gi|346325712|gb|EGX95309.1| mRNA binding post-transcriptional regulator [Cordyceps militaris
CM01]
Length = 474
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 100/327 (30%), Positives = 156/327 (47%), Gaps = 38/327 (11%)
Query: 43 PSGNL----PPGFDPSTCRSVYVGNIHTQVTEPLLQEVF-SSTGPVEGCKLIRKDKSS-- 95
PSG++ P G + ++++G + + E ++ VF S+ G K+IR DK+S
Sbjct: 89 PSGDMSAPPPTGSSDQSKTTLWMGELEPWMDENFIKGVFLSAAGETVNVKVIR-DKNSGN 147
Query: 96 --YGFIHYFDRRSAAMAILSLNGRHL--FGQPIKVNWAYASG---QREDTSGHFNIFVGD 148
Y F+ F AA L LNG + + K+NWA G +R+D ++IFVGD
Sbjct: 148 AGYCFVE-FQNADAASKALGLNGNPVPNSSRQFKLNWASGGGLVDRRDDRGPEYSIFVGD 206
Query: 149 LSPEVTDATLFACFSV-YPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKW 207
L PEV + L + F +PSC A++M D +G+SRG+GFV F ++ D Q A+ ++ G +
Sbjct: 207 LGPEVNEYVLVSLFQARFPSCKSAKIMTDAMSGQSRGYGFVRFSDENDQQRALVEMQGVY 266
Query: 208 LGSRQIRCNWAT-KGAGNNEDKQSSDAKSVVELT---------------NGSSEDGKETT 251
G+R +R + AT K GN+ + G + G
Sbjct: 267 CGNRPMRISTATPKNRGNHGFGHGHHGGGGPMMGGGMPQQQQQPMWNGMQGFAYGGYNPA 326
Query: 252 NTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHA 311
+P TTV+VG L+ VT+ +L F G G I V++ KG GFV++
Sbjct: 327 TQMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQ--GFGEITYVKIPPGKGCGFVQFVHRH 384
Query: 312 EAALAIQMGNTTQSSYLFGKQMKCSWG 338
A +AI N Q + +++ SWG
Sbjct: 385 AAEMAI---NQMQGYPIGNSRVRLSWG 408
>gi|386766659|ref|NP_001163756.2| CG34354, isoform E [Drosophila melanogaster]
gi|386766661|ref|NP_001163755.2| CG34354, isoform D [Drosophila melanogaster]
gi|383292995|gb|ACZ95050.2| CG34354, isoform E [Drosophila melanogaster]
gi|383292996|gb|ACZ95049.2| CG34354, isoform D [Drosophila melanogaster]
Length = 431
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 73/204 (35%), Positives = 109/204 (53%), Gaps = 16/204 (7%)
Query: 141 HFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAI 200
F+IFVGDLS E+ L F+ + SD RV+ D +T +S+G+GFVSF + +A++AI
Sbjct: 95 QFHIFVGDLSAEIETQQLKDAFTPFGEISDCRVVRDPQTLKSKGYGFVSFVKKSEAETAI 154
Query: 201 NDLTGKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNP 260
+ G+WLGSR IR NWAT+ + ++ + E+ N SS P N
Sbjct: 155 TAMNGQWLGSRSIRTNWATRKPPATKADMNAKPLTFDEVYNQSS-----------PTNCT 203
Query: 261 QYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMG 320
Y G L+ + + L + F G I+E+RV +DKG+ FVR+ST A AI
Sbjct: 204 VYCGGINGALSGFLNEEILQKTFSPY--GTIQEIRVFKDKGYAFVRFSTKEAATHAIVAV 261
Query: 321 NTTQSSYLFGKQMKCSWGSKPTPP 344
N T+ + + +KC+WG + P
Sbjct: 262 NNTEINQ---QPVKCAWGKESGDP 282
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/214 (21%), Positives = 88/214 (41%), Gaps = 40/214 (18%)
Query: 59 VYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKS----SYGFIHYFDRRSAAMAILSL 114
++VG++ ++ L++ F+ G + C+++R ++ YGF+ + + A AI ++
Sbjct: 98 IFVGDLSAEIETQQLKDAFTPFGEISDCRVVRDPQTLKSKGYGFVSFVKKSEAETAITAM 157
Query: 115 NGRHLFGQPIKVNWA---------------------YASGQREDTSGHFNIFVGDLSPEV 153
NG+ L + I+ NWA Y + + + G LS +
Sbjct: 158 NGQWLGSRSIRTNWATRKPPATKADMNAKPLTFDEVYNQSSPTNCTVYCGGINGALSGFL 217
Query: 154 TDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQI 213
+ L FS Y + + RV D +G+ FV F ++ A AI + + + +
Sbjct: 218 NEEILQKTFSPYGTIQEIRVFKD------KGYAFVRFSTKEAATHAIVAVNNTEINQQPV 271
Query: 214 RCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDG 247
+C W K+S D + + G+ G
Sbjct: 272 KCAWG---------KESGDPNHMSAIAGGALAQG 296
>gi|161078704|ref|NP_001097953.1| CG34354, isoform A [Drosophila melanogaster]
gi|158030423|gb|ABW08789.1| CG34354, isoform A [Drosophila melanogaster]
Length = 525
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 73/204 (35%), Positives = 109/204 (53%), Gaps = 16/204 (7%)
Query: 141 HFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAI 200
F+IFVGDLS E+ L F+ + SD RV+ D +T +S+G+GFVSF + +A++AI
Sbjct: 95 QFHIFVGDLSAEIETQQLKDAFTPFGEISDCRVVRDPQTLKSKGYGFVSFVKKSEAETAI 154
Query: 201 NDLTGKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNP 260
+ G+WLGSR IR NWAT+ + ++ + E+ N SS P N
Sbjct: 155 TAMNGQWLGSRSIRTNWATRKPPATKADMNAKPLTFDEVYNQSS-----------PTNCT 203
Query: 261 QYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMG 320
Y G L+ + + L + F G I+E+RV +DKG+ FVR+ST A AI
Sbjct: 204 VYCGGINGALSGFLNEEILQKTFSPY--GTIQEIRVFKDKGYAFVRFSTKEAATHAIVAV 261
Query: 321 NTTQSSYLFGKQMKCSWGSKPTPP 344
N T+ + + +KC+WG + P
Sbjct: 262 NNTE---INQQPVKCAWGKESGDP 282
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/214 (21%), Positives = 88/214 (41%), Gaps = 40/214 (18%)
Query: 59 VYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKS----SYGFIHYFDRRSAAMAILSL 114
++VG++ ++ L++ F+ G + C+++R ++ YGF+ + + A AI ++
Sbjct: 98 IFVGDLSAEIETQQLKDAFTPFGEISDCRVVRDPQTLKSKGYGFVSFVKKSEAETAITAM 157
Query: 115 NGRHLFGQPIKVNWA---------------------YASGQREDTSGHFNIFVGDLSPEV 153
NG+ L + I+ NWA Y + + + G LS +
Sbjct: 158 NGQWLGSRSIRTNWATRKPPATKADMNAKPLTFDEVYNQSSPTNCTVYCGGINGALSGFL 217
Query: 154 TDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQI 213
+ L FS Y + + RV D +G+ FV F ++ A AI + + + +
Sbjct: 218 NEEILQKTFSPYGTIQEIRVFKD------KGYAFVRFSTKEAATHAIVAVNNTEINQQPV 271
Query: 214 RCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDG 247
+C W K+S D + + G+ G
Sbjct: 272 KCAWG---------KESGDPNHMSAIAGGALAQG 296
>gi|444321552|ref|XP_004181432.1| hypothetical protein TBLA_0F03780 [Tetrapisispora blattae CBS 6284]
gi|387514476|emb|CCH61913.1| hypothetical protein TBLA_0F03780 [Tetrapisispora blattae CBS 6284]
Length = 577
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 80/277 (28%), Positives = 134/277 (48%), Gaps = 42/277 (15%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIR----KDKSSYGFIHYFDRRSAAMAILS 113
S+YVG + V+E LL ++FS G V ++ R K Y ++++ D + AI
Sbjct: 44 SLYVGELDPSVSEALLYDIFSPIGSVSSIRVCRDAITKTSLGYAYVNFNDHEAGKTAIEK 103
Query: 114 LNGRHLFGQPIKVNWAYAS-GQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDAR 172
LN + G+P ++ W+ R+ SG NIF+ +L P++ + TL+ FSV+ + +
Sbjct: 104 LNYTAIKGRPCRIMWSQRDPSMRKKGSG--NIFIKNLHPDIDNKTLYETFSVFGNILSCK 161
Query: 173 VMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSSD 232
+ D+ TG+S+GFGFV F N++ A+ AI+ + G L +++ + +D+QS
Sbjct: 162 IANDE-TGKSKGFGFVHFENEEAAREAIDAINGMLLNGQEVYVAPHV----SKKDRQS-- 214
Query: 233 AKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIE 292
+ E +T VYV NL E T+ D F G I
Sbjct: 215 ---------------------KLDEARANFTNVYVKNLDLEATEEDFENLFKPY--GTIT 251
Query: 293 EVRVQRD-----KGFGFVRYSTHAEAALAIQMGNTTQ 324
V +++D +GFGFV + H +A A++ N T+
Sbjct: 252 SVALEKDAEGKSRGFGFVDFENHEDAVKAVEALNDTE 288
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 75/163 (46%), Gaps = 19/163 (11%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS---YGFIHYFDRRSAAMAILSL 114
+VYV N+ + TE + +F G + L + + +GF+ + + A A+ +L
Sbjct: 225 NVYVKNLDLEATEEDFENLFKPYGTITSVALEKDAEGKSRGFGFVDFENHEDAVKAVEAL 284
Query: 115 NGRHLFGQPIKVNWA-------------YASGQREDTSGH--FNIFVGDLSPEVTDATLF 159
N GQ + V A Y + + E + + N+F+ +L + D L
Sbjct: 285 NDTEYKGQTLYVGRAQKKYERLQELKKQYQASKLEKLAKYQGINLFIKNLDDSIDDEKLK 344
Query: 160 ACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAIND 202
F+ + + + ARVM + G+S+GFGFV F ++A AI +
Sbjct: 345 EEFAPFGTITSARVMRTE-NGKSKGFGFVCFSTPEEATRAITE 386
>gi|83774240|dbj|BAE64365.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 488
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 96/299 (32%), Positives = 149/299 (49%), Gaps = 27/299 (9%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS-----YGFIHYFDRRSAAMAIL 112
++++G + + E ++ ++ G K+IR DK S Y F+ F +AA L
Sbjct: 65 TLWMGELEPWIDENFIRNLWFQMGEQVNVKMIR-DKFSGSNAGYCFVD-FSSPAAAAKAL 122
Query: 113 SLNGRHL--FGQPIKVNWAYASG----QREDTSGHFNIFVGDLSPEVTDATLFACF-SVY 165
SLNG + + K+NWA G R+D ++IFVGDL PEV + L + F S +
Sbjct: 123 SLNGTPMPNTNRLFKLNWATGGGLADRSRDDRGPEYSIFVGDLGPEVNEYVLVSLFQSRF 182
Query: 166 PSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT---KGA 222
PSC A++M D +G SRG+GFV F ++ D Q A++++ G + G+R +R + AT KG
Sbjct: 183 PSCKSAKIMTDPISGMSRGYGFVRFSDENDQQRALSEMQGVYCGNRPMRISTATPKNKGP 242
Query: 223 GNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPEN---NPQYTTVYVGNLAPEVTQLDL 279
G + + G+ G P N +P TTV+VG L+ VT+ +L
Sbjct: 243 GVVPGGMGMPGPAGMYPPMGAPPMG--FYGAPQPMNQFTDPNNTTVFVGGLSGYVTEDEL 300
Query: 280 HRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWG 338
F G G I V++ KG GFV++ A +AI N Q + +++ SWG
Sbjct: 301 RSFFQ--GFGEITYVKIPPGKGCGFVQFVQRHAAEMAI---NQMQGYPIGNSRVRLSWG 354
>gi|226495169|ref|NP_001150649.1| nucleic acid binding protein [Zea mays]
gi|195640856|gb|ACG39896.1| nucleic acid binding protein [Zea mays]
Length = 420
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 91/296 (30%), Positives = 146/296 (49%), Gaps = 38/296 (12%)
Query: 57 RSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS----YGFIHYFDRRSAAMAIL 112
++++VG++ + E L F +G V K+IR ++ YGF+ +F SA A+
Sbjct: 99 KTIWVGDLQYWMDENYLHNCFGPSGEVVTIKVIRNRQTGQSEGYGFVEFFSHASAEKALQ 158
Query: 113 SLNGRHL--FGQPIKVNWA-YASGQ-REDTSGHFNIFVGDLSPEVTDATLFACFSV-YPS 167
+ G + +P K+NWA Y+ G+ R + + +IFVGDL+ +VTD L FS Y S
Sbjct: 159 NFTGHVMPNTDRPFKLNWASYSMGEKRSEVASDHSIFVGDLAADVTDEMLLELFSSKYRS 218
Query: 168 CSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNED 227
A+V+ D TGRSRG+GFV F + D A++++ G + +R IR AT + +
Sbjct: 219 VKGAKVIIDANTGRSRGYGFVRFGDDNDKSHAMSEMNGVYCSTRPIRIGPATPRRSSGDS 278
Query: 228 KQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLG 287
S+ S DG + TVYVG L P V++ +L + F
Sbjct: 279 GSSTPGHS----------DGDSSNR-----------TVYVGGLDPNVSEDELRKAFAKYD 317
Query: 288 AGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQ-MKCSWGSKPT 342
+ V++ K GFV++ + +A A+Q N + L GKQ ++ SW P+
Sbjct: 318 ---LASVKIPLGKQCGFVQFVSRTDAEEALQGLNGS----LIGKQAVRLSWVRSPS 366
>gi|297846966|ref|XP_002891364.1| ATRBP47C [Arabidopsis lyrata subsp. lyrata]
gi|297337206|gb|EFH67623.1| ATRBP47C [Arabidopsis lyrata subsp. lyrata]
Length = 443
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 92/298 (30%), Positives = 145/298 (48%), Gaps = 39/298 (13%)
Query: 57 RSVYVGNIHTQVTEPLLQEVFSST-GPVE--GCKLIRKDKSS----YGFIHYFDRRSAAM 109
++++VG++H + E L F+S G ++ K+IR + YGF+ + A
Sbjct: 108 KTIWVGDLHHWMDETYLNSSFASADGEIQIVSVKVIRNKHNGLSEGYGFVEFDSHDVADK 167
Query: 110 AILSLNGRHL--FGQPIKVNWA-YASGQR--EDTSGHFNIFVGDLSPEVTDATLFACFS- 163
+ NG + QP ++NWA +++G++ E+ +IFVGDL+P+V+D L FS
Sbjct: 168 VLQEFNGTTMPDTEQPFRLNWASFSTGEKRLENNGPDLSIFVGDLAPDVSDTLLHETFSE 227
Query: 164 VYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAG 223
YPS A+V+ D TGRS+G+GFV F ++ + A+ ++ G SR +R AT
Sbjct: 228 KYPSVKAAKVVIDANTGRSKGYGFVRFGDENERTKAMTEMNGVKCSSRAMRIGPATP--- 284
Query: 224 NNEDKQSSDAKSVVELTNGSSEDGKETTN--TEAPENNPQYTTVYVGNLAPEVTQLDLHR 281
T G + G N PE + TT++VG L VT DL +
Sbjct: 285 --------------RKTTGYQQQGGYMPNGALTRPEGDTLNTTIFVGGLDSSVTDDDLRQ 330
Query: 282 HFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQ-MKCSWG 338
F G I V++ KG GFV++ A A++ N T + GKQ ++ SWG
Sbjct: 331 PFSEFGE--IVSVKIPVGKGCGFVQFVNRPSAEEALEKLNGT----VIGKQTVRLSWG 382
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 83/197 (42%), Gaps = 32/197 (16%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGP-VEGCKLIRKDKSS----YGFIHYFDRRSAAMAIL 112
S++VG++ V++ LL E FS P V+ K++ + YGF+ + D A+
Sbjct: 206 SIFVGDLAPDVSDTLLHETFSEKYPSVKAAKVVIDANTGRSKGYGFVRFGDENERTKAMT 265
Query: 113 SLNGRHLFGQPIKVNWAY-----------------ASGQREDTSGHFNIFVGDLSPEVTD 155
+NG + +++ A A + E + + IFVG L VTD
Sbjct: 266 EMNGVKCSSRAMRIGPATPRKTTGYQQQGGYMPNGALTRPEGDTLNTTIFVGGLDSSVTD 325
Query: 156 ATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRC 215
L FS + ++ +G GFV F N+ A+ A+ L G +G + +R
Sbjct: 326 DDLRQPFSEFGEIVSVKI------PVGKGCGFVQFVNRPSAEEALEKLNGTVIGKQTVRL 379
Query: 216 NWATKGAGNNEDKQSSD 232
+W N +KQ D
Sbjct: 380 SWGR----NQANKQPRD 392
Score = 39.7 bits (91), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 22/89 (24%), Positives = 45/89 (50%), Gaps = 2/89 (2%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSSYGFIHYFDRRSAAMAILSLNGR 117
+++VG + + VT+ L++ FS G + K+ GF+ + +R SA A+ LNG
Sbjct: 313 TIFVGGLDSSVTDDDLRQPFSEFGEIVSVKI--PVGKGCGFVQFVNRPSAEEALEKLNGT 370
Query: 118 HLFGQPIKVNWAYASGQREDTSGHFNIFV 146
+ Q ++++W ++ + N +V
Sbjct: 371 VIGKQTVRLSWGRNQANKQPRDKYGNQWV 399
>gi|194703366|gb|ACF85767.1| unknown [Zea mays]
Length = 420
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 91/296 (30%), Positives = 146/296 (49%), Gaps = 38/296 (12%)
Query: 57 RSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS----YGFIHYFDRRSAAMAIL 112
++++VG++ + E L F +G V K+IR ++ YGF+ +F SA A+
Sbjct: 99 KTIWVGDLQYWMDENYLHNCFGPSGEVVTIKVIRNRQTGQSEGYGFVEFFSHASAEKALQ 158
Query: 113 SLNGRHL--FGQPIKVNWA-YASGQ-REDTSGHFNIFVGDLSPEVTDATLFACFSV-YPS 167
+ G + +P K+NWA Y+ G+ R + + +IFVGDL+ +VTD L FS Y S
Sbjct: 159 NFTGHVMPNTDRPFKLNWASYSMGEKRSEVASDHSIFVGDLAADVTDEMLLELFSSKYRS 218
Query: 168 CSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNED 227
A+V+ D TGRSRG+GFV F + D A++++ G + +R IR AT + +
Sbjct: 219 VKGAKVIIDANTGRSRGYGFVRFGDDNDKSHAMSEMNGVYCSTRPIRIGPATPRRSSGDS 278
Query: 228 KQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLG 287
S+ S DG + TVYVG L P V++ +L + F
Sbjct: 279 GSSTPGHS----------DGDSSNR-----------TVYVGGLDPNVSEDELRKAFAKYD 317
Query: 288 AGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQ-MKCSWGSKPT 342
+ V++ K GFV++ + +A A+Q N + L GKQ ++ SW P+
Sbjct: 318 ---LASVKIPLGKQCGFVQFVSRTDAEEALQGLNGS----LIGKQAVRLSWVRSPS 366
>gi|310798962|gb|EFQ33855.1| RNA recognition domain-containing protein [Glomerella graminicola
M1.001]
Length = 419
Score = 121 bits (303), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 96/312 (30%), Positives = 157/312 (50%), Gaps = 38/312 (12%)
Query: 58 SVYVGNIHTQVTEPLLQEVF-SSTGPVEGCKLIRKDKSS----YGFIHYFDRRSAAMAIL 112
++++G + + E ++ VF ++TG K+IR DK+S Y F+ + +A+ A L
Sbjct: 60 TLWMGELEPWMDENFIKGVFLTATGEPVNVKVIR-DKTSGNAGYCFVEFTSSEAASKA-L 117
Query: 113 SLNGRHL--FGQPIKVNWAYASG---QREDTSGHFNIFVGDLSPEVTDATLFACFSV-YP 166
+LNG + + K+NWA G +R+D ++IFVGDL PEV + L + F +P
Sbjct: 118 TLNGSPVPNSNRAFKLNWASGGGINDRRDDRGPEYSIFVGDLGPEVNEYVLVSLFQARFP 177
Query: 167 SCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT---KGAG 223
SC A++M D +G+SRG+GFV F ++QD Q A+ ++ G + G+R +R + AT + G
Sbjct: 178 SCKSAKIMTDAMSGQSRGYGFVRFTDEQDQQRALVEMQGVYCGNRPMRISTATPKNRNHG 237
Query: 224 NNEDKQSSDAKSVV-------ELTNGSSEDGKETTNTEAPEN----------NPQYTTVY 266
+Q + + + G + AP N +P TTV+
Sbjct: 238 GPYQQQHHGNQMMAPGLPPHQQGFYGVPSPAQYGGAYGAPYNPPGQQMNQFTDPNNTTVF 297
Query: 267 VGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSS 326
VG L+ VT+ +L F G G I V++ KG GFV++ A +AI N Q
Sbjct: 298 VGGLSGYVTEDELRSFFQ--GFGEITYVKIPPGKGCGFVQFVHRHAAEMAI---NQMQGY 352
Query: 327 YLFGKQMKCSWG 338
+ +++ SWG
Sbjct: 353 PIGNSRVRLSWG 364
>gi|340924065|gb|EGS18968.1| hypothetical protein CTHT_0055850 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 393
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 94/310 (30%), Positives = 151/310 (48%), Gaps = 29/310 (9%)
Query: 52 DPSTCRSVYVGNIHTQVTEPLLQEVFSST-GPVEGCKLIRKDKSS---YGFIHYFDRRSA 107
+P +++++G + + E ++ VF + G K+IR S Y F+ F A
Sbjct: 36 NPDAPKTLWMGEMEGWMDETFIKNVFQTVMGESVQVKVIRDRNSGNAGYCFVE-FQTPEA 94
Query: 108 AMAILSLNGRHL--FGQPIKVNWAYASG---QREDTSGHFNIFVGDLSPEVTDATLFACF 162
A L LNG + + K+NWA G +R+D ++IFVGDL PEV + L + F
Sbjct: 95 AQKALGLNGTPVPNSNRVFKLNWASGGGLVDRRDDRGPEYSIFVGDLGPEVNEFVLVSLF 154
Query: 163 -SVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKG 221
S +PSC A++M D TG+SRG+GFV F ++ D Q A+ ++ G + G+R +R + AT
Sbjct: 155 QSRFPSCKSAKIMTDAMTGQSRGYGFVRFSDEADMQRALVEMQGVYCGNRPMRISTATPK 214
Query: 222 AGNNEDKQSSDAKSVVELTN----------GSSEDGKETTNTEAPEN---NPQYTTVYVG 268
++ + + + G+ + N P N +P TTV+VG
Sbjct: 215 QRSHHHQYGHHPPAPMMPPVPGHPAAPPMWGNYPYYGQQYNPIQPMNQFTDPNNTTVFVG 274
Query: 269 NLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYL 328
L+ VT+ +L F G G I V++ KG GFV++ A +AI N Q +
Sbjct: 275 GLSGYVTEDELRSFFQ--GFGEITYVKIPPGKGCGFVQFVHRHAAEMAI---NQMQGYPI 329
Query: 329 FGKQMKCSWG 338
+++ SWG
Sbjct: 330 GNSRVRLSWG 339
>gi|317155988|ref|XP_001825498.2| mRNA binding post-transcriptional regulator (Csx1) [Aspergillus
oryzae RIB40]
Length = 404
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 93/299 (31%), Positives = 148/299 (49%), Gaps = 26/299 (8%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIR-----KDKSSYGFIHYFDRRSAAMAIL 112
++++G + + E ++ ++ G K+IR + + Y F+ F +AA L
Sbjct: 65 TLWMGELEPWIDENFIRNLWFQMGEQVNVKMIRDKFSGRSNAGYCFVD-FSSPAAAAKAL 123
Query: 113 SLNGRHL--FGQPIKVNWAYASG----QREDTSGHFNIFVGDLSPEVTDATLFACF-SVY 165
SLNG + + K+NWA G R+D ++IFVGDL PEV + L + F S +
Sbjct: 124 SLNGTPMPNTNRLFKLNWATGGGLADRSRDDRGPEYSIFVGDLGPEVNEYVLVSLFQSRF 183
Query: 166 PSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT---KGA 222
PSC A++M D +G SRG+GFV F ++ D Q A++++ G + G+R +R + AT KG
Sbjct: 184 PSCKSAKIMTDPISGMSRGYGFVRFSDENDQQRALSEMQGVYCGNRPMRISTATPKNKGP 243
Query: 223 GNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPEN---NPQYTTVYVGNLAPEVTQLDL 279
G + + G+ G P N +P TTV+VG L+ VT+ +L
Sbjct: 244 GVVPGGMGMPGPAGMYPPMGAPPMG--FYGAPQPMNQFTDPNNTTVFVGGLSGYVTEDEL 301
Query: 280 HRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWG 338
F G G I V++ KG GFV++ A +AI N Q + +++ SWG
Sbjct: 302 RSFFQ--GFGEITYVKIPPGKGCGFVQFVQRHAAEMAI---NQMQGYPIGNSRVRLSWG 355
>gi|195620484|gb|ACG32072.1| nucleic acid binding protein [Zea mays]
gi|195625400|gb|ACG34530.1| nucleic acid binding protein [Zea mays]
Length = 369
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 91/296 (30%), Positives = 146/296 (49%), Gaps = 38/296 (12%)
Query: 57 RSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS----YGFIHYFDRRSAAMAIL 112
++++VG++ + E L F +G V K+IR ++ YGF+ +F SA A+
Sbjct: 48 KTIWVGDLQYWMDENYLHNCFGPSGEVVTIKVIRNRQTGQSEGYGFVEFFSHASAEKALQ 107
Query: 113 SLNGRHL--FGQPIKVNWA-YASGQ-REDTSGHFNIFVGDLSPEVTDATLFACFSV-YPS 167
+ G + +P K+NWA Y+ G+ R + + +IFVGDL+ +VTD L FS Y S
Sbjct: 108 NFTGHVMPNTDRPFKLNWASYSMGEKRSEVASDHSIFVGDLAADVTDEMLLELFSSKYRS 167
Query: 168 CSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNED 227
A+V+ D TGRSRG+GFV F + D A++++ G + +R IR AT + +
Sbjct: 168 VKGAKVIIDANTGRSRGYGFVRFGDDNDKSHAMSEMNGVYCSTRPIRIGPATPRRSSGDS 227
Query: 228 KQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLG 287
S+ S DG + TVYVG L P V++ +L + F
Sbjct: 228 GSSTPGHS----------DGDSSNR-----------TVYVGGLDPNVSEDELRKAFAKYD 266
Query: 288 AGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQ-MKCSWGSKPT 342
+ V++ K GFV++ + +A A+Q N + L GKQ ++ SW P+
Sbjct: 267 ---LASVKIPLGKQCGFVQFVSRTDAEEALQGLNGS----LIGKQAVRLSWVRSPS 315
>gi|219888851|gb|ACL54800.1| unknown [Zea mays]
gi|414589690|tpg|DAA40261.1| TPA: hypothetical protein ZEAMMB73_589753 [Zea mays]
Length = 322
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 90/285 (31%), Positives = 138/285 (48%), Gaps = 37/285 (12%)
Query: 68 VTEPLLQEVFSSTGPVEGCKLIRKDKSS----YGFIHYFDRRSAAMAILSLNGRHLF--- 120
+ E L F TG V K+IR ++ YGF+ ++ +A + +G H+
Sbjct: 1 MDENYLHNCFGYTGEVVAIKVIRNKQTGQSEGYGFVEFYSHAAAERVLEGFSG-HIMPNT 59
Query: 121 GQPIKVNWAYAS--GQREDTSGHFNIFVGDLSPEVTDATLFACFSV-YPSCSDARVMWDQ 177
QP ++NWA S +R D + +IFVGDL+ +V DATL FS Y S A+V+ D
Sbjct: 60 DQPFRLNWASFSMGDRRSDVASDHSIFVGDLASDVNDATLLEVFSSRYSSVKGAKVVIDA 119
Query: 178 KTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVV 237
TGRS+G+GFV F + + A+ ++ G + SR +R AT + +
Sbjct: 120 NTGRSKGYGFVRFGDDSEKTHAMTEMNGVYCSSRPMRIGPATP---------RKSSGTSG 170
Query: 238 ELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQ 297
+ + DG + TN TTV+VG L P+V++ DL + F G I V++
Sbjct: 171 SNGSSARPDGGDLTN----------TTVFVGGLDPDVSEEDLRQAFSQYGE--ISSVKIP 218
Query: 298 RDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQ-MKCSWGSKP 341
K GFV+++ A A+Q N + GKQ ++ SWG P
Sbjct: 219 VGKQCGFVQFAQRKNAEDALQGLNGS----TIGKQAVRLSWGRNP 259
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 87/185 (47%), Gaps = 24/185 (12%)
Query: 52 DPSTCRSVYVGNIHTQVTEPLLQEVFSST-GPVEGCKLIRKDKS----SYGFIHYFDRRS 106
D ++ S++VG++ + V + L EVFSS V+G K++ + YGF+ + D
Sbjct: 78 DVASDHSIFVGDLASDVNDATLLEVFSSRYSSVKGAKVVIDANTGRSKGYGFVRFGDDSE 137
Query: 107 AAMAILSLNGRHLFGQPIKVNWA-----------YASGQREDTSGHFN--IFVGDLSPEV 153
A+ +NG + +P+++ A S R D N +FVG L P+V
Sbjct: 138 KTHAMTEMNGVYCSSRPMRIGPATPRKSSGTSGSNGSSARPDGGDLTNTTVFVGGLDPDV 197
Query: 154 TDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQI 213
++ L FS Y S ++ ++ GFV F +++A+ A+ L G +G + +
Sbjct: 198 SEEDLRQAFSQYGEISSVKIPVGKQC------GFVQFAQRKNAEDALQGLNGSTIGKQAV 251
Query: 214 RCNWA 218
R +W
Sbjct: 252 RLSWG 256
>gi|19115155|ref|NP_594243.1| RNA-binding protein Csx1 [Schizosaccharomyces pombe 972h-]
gi|3121946|sp|O13759.1|CSX1_SCHPO RecName: Full=RNA-binding post-transcriptional regulator csx1
gi|2656019|emb|CAB16569.1| RNA-binding protein Csx1 [Schizosaccharomyces pombe]
Length = 632
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 85/299 (28%), Positives = 148/299 (49%), Gaps = 25/299 (8%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS------YGFIHYFDRRSAAMAI 111
++++G++ + +Q++++S K++R SS Y F+ + +A A+
Sbjct: 86 TLWMGDLEPWMDATFIQQLWASLNEPVNVKVMRSKASSSETLISYCFVQFSSSAAAERAL 145
Query: 112 LSLNGRHLFGQ--PIKVNWAYASGQREDT----SGHFNIFVGDLSPEVTDATLFACF-SV 164
+ N + G K+NWA G + + F+IFVGDL P D+ LF F S+
Sbjct: 146 MKYNNTMIPGAHCTFKLNWATGGGIQHNNFVSRDPEFSIFVGDLLPTTEDSDLFMTFRSI 205
Query: 165 YPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGN 224
YPSC+ A+++ D TG SR +GFV F ++++ Q A+ + G R +R + A+
Sbjct: 206 YPSCTSAKIIVDPVTGLSRKYGFVRFSSEKEQQHALMHMQGYLCQGRPLRISVASP---- 261
Query: 225 NEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFH 284
+ + S A S + + S+ + + N + +P TTV+VG LA +++ DL F
Sbjct: 262 -KSRASIAADSALGIVPTSTSNRQP--NQDLCSMDPLNTTVFVGGLASNLSEKDLQVCFQ 318
Query: 285 SLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSKPTP 343
G I +++ KG GFV+YS + A AI NT Q + + ++ +WG P
Sbjct: 319 PFGR--ILNIKIPFGKGCGFVQYSEKSAAEKAI---NTMQGALVGTSHIRLAWGHNTLP 372
>gi|396480654|ref|XP_003841045.1| hypothetical protein LEMA_P089750.1 [Leptosphaeria maculans JN3]
gi|312217619|emb|CBX97566.1| hypothetical protein LEMA_P089750.1 [Leptosphaeria maculans JN3]
Length = 433
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 92/301 (30%), Positives = 146/301 (48%), Gaps = 27/301 (8%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS----YGFIHYFDRRSAAMAILS 113
++++G + + E ++ ++ + G K+IR DK S Y F+ F AA L+
Sbjct: 73 TLWMGELEPWIDENFVRSIWYNMGETVNVKMIR-DKFSGNAGYCFVD-FSSPDAAAKALT 130
Query: 114 LNGRHL--FGQPIKVNWAYASG----QREDTSGHFNIFVGDLSPEVTDATLFACF-SVYP 166
LNG+ + +P K+NWA G R++ ++IFVGDL PEVT+ L F + YP
Sbjct: 131 LNGQLIPNSNRPFKLNWASGGGLADRSRDERGPEYSIFVGDLGPEVTEFVLVQLFQNKYP 190
Query: 167 SCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT----KGA 222
S A++M D +G SRG+GFV F +++D Q A+ ++ G + G+R +R + AT G
Sbjct: 191 STKSAKIMSDPISGMSRGYGFVRFASEEDQQKALTEMQGVYCGNRPMRISTATPKNKSGG 250
Query: 223 GNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPE-----NNPQYTTVYVGNLAPEVTQL 277
+ S AP+ +P TTV+VG L+ VT+
Sbjct: 251 PGGPGGMGMPQQGGGPGMGMYSMGAPPMGYYGAPQPMNQFTDPNNTTVFVGGLSGYVTED 310
Query: 278 DLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSW 337
+L F G G I V++ KG GFV++ A +AI N Q + +++ SW
Sbjct: 311 ELRSFFQ--GFGEITYVKIPPGKGCGFVQFVQRHAAEMAI---NQMQGYPIGNSRVRLSW 365
Query: 338 G 338
G
Sbjct: 366 G 366
>gi|147859325|emb|CAN83958.1| hypothetical protein VITISV_039907 [Vitis vinifera]
Length = 410
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 95/306 (31%), Positives = 147/306 (48%), Gaps = 38/306 (12%)
Query: 48 PPGFDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS----YGFIHYFD 103
P +P RS+++G++ + E FS TG V K+IR ++ YGFI
Sbjct: 66 PQASNPEEIRSLWIGDLQPWMEENYXWGCFSQTGEVVSVKVIRNKQTGQCEGYGFIELAT 125
Query: 104 RRSAAMAILSLNGRHLFG--QPIKVNWAY--ASGQREDTSGHFNIFVGDLSPEVTDATLF 159
R +A + + NG + Q ++NWA A +R D + + IFVGDL+ +VTD L
Sbjct: 126 RAAAERILQTYNGTLMPNSEQNFRLNWATLGAGERRADDTPDYTIFVGDLASDVTDYVLQ 185
Query: 160 ACFSV-YPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWA 218
F YPS A+V+ D+ TGRS+G+GFV F ++ + A+N++ G + +R +R A
Sbjct: 186 ETFRGHYPSVKGAKVVTDRTTGRSKGYGFVRFGDEGEQLRAMNEMNGMFCSTRPMRIGPA 245
Query: 219 TKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAP--ENNPQYTTVYVGNLAPEVTQ 276
+ K V G NT+ E++P TT++VG L VT
Sbjct: 246 ------------ATKKPV----------GASFQNTQGXQGESDPNNTTIFVGGLDSNVTD 283
Query: 277 LDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCS 336
L + F G V V++ K GFV+++ A A A+ N TQ L + ++ S
Sbjct: 284 DYLRQVFSQYGELV--HVKIPVGKRCGFVQFANRACAEQALAGLNGTQ---LGAQSIRLS 338
Query: 337 WGSKPT 342
WG P+
Sbjct: 339 WGRSPS 344
>gi|449455232|ref|XP_004145357.1| PREDICTED: polyadenylate-binding protein RBP47-like [Cucumis
sativus]
Length = 436
Score = 120 bits (302), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 91/295 (30%), Positives = 150/295 (50%), Gaps = 25/295 (8%)
Query: 56 CRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS----YGFIHYFDRRSAAMAI 111
+++++G++ + E L F+ TG V K+I ++ YGF+ +F +A +
Sbjct: 99 VKTLWIGDLQPWMDETYLNNCFAHTGEVSSVKVICNKQTGQSEGYGFVEFFSHTTAEKVL 158
Query: 112 LSLNGRHLFGQ--PIKVNWAY--ASGQREDTSGHFNIFVGDLSPEVTDATLFACFSV-YP 166
+ NG + P ++NWA A+ +R DT +IFVGDL+ +VTDA L FS Y
Sbjct: 159 QNYNGTIMPNTELPFRLNWATFSANDRRPDTGSDLSIFVGDLAADVTDAILQETFSSRYT 218
Query: 167 SCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT--KGAGN 224
S A+V+ D +G S+G+GF F ++ + A+ ++ G + SR +R AT K +G
Sbjct: 219 SVKGAKVVIDSNSGPSKGYGF-RFGDENERTRAMTEMNGIYCSSRPMRIGVATPKKASGY 277
Query: 225 NEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFH 284
+ S NG + G + +++ NN TT++VG L +V+ DL + F
Sbjct: 278 QQGYASQALVLAGGHPNGMAVQGSQ---SDSESNN---TTIFVGGLDSDVSDEDLKQAFS 331
Query: 285 SLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQ-MKCSWG 338
G + V++ KG GFV+++ A AIQ N T + GKQ ++ SWG
Sbjct: 332 KFGD--VVSVKIPIGKGCGFVQFANRKNAEDAIQGLNGT----VIGKQTVRLSWG 380
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 95/214 (44%), Gaps = 41/214 (19%)
Query: 52 DPSTCRSVYVGNIHTQVTEPLLQEVFSST-GPVEGCKLIRKDKSS----YGFIHYFDRRS 106
D + S++VG++ VT+ +LQE FSS V+G K++ S YGF + D
Sbjct: 188 DTGSDLSIFVGDLAADVTDAILQETFSSRYTSVKGAKVVIDSNSGPSKGYGF-RFGDENE 246
Query: 107 AAMAILSLNGRHLFGQPIKVNWA-----------YAS-----------------GQREDT 138
A+ +NG + +P+++ A YAS Q +
Sbjct: 247 RTRAMTEMNGIYCSSRPMRIGVATPKKASGYQQGYASQALVLAGGHPNGMAVQGSQSDSE 306
Query: 139 SGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQS 198
S + IFVG L +V+D L FS + ++ +G GFV F N+++A+
Sbjct: 307 SNNTTIFVGGLDSDVSDEDLKQAFSKFGDVVSVKIP------IGKGCGFVQFANRKNAED 360
Query: 199 AINDLTGKWLGSRQIRCNWATKGAGNNEDKQSSD 232
AI L G +G + +R +W + GN + + S+
Sbjct: 361 AIQGLNGTVIGKQTVRLSWG-RSTGNKQWRGDSN 393
>gi|195574479|ref|XP_002105216.1| GD21365 [Drosophila simulans]
gi|194201143|gb|EDX14719.1| GD21365 [Drosophila simulans]
Length = 363
Score = 120 bits (302), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 73/203 (35%), Positives = 109/203 (53%), Gaps = 16/203 (7%)
Query: 142 FNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAIN 201
F+IFVGDLS E+ L F+ + SD RV+ D +T +S+G+GFVSF + +A++AI
Sbjct: 97 FHIFVGDLSAEIETQQLKDAFTPFGEISDCRVVRDPQTLKSKGYGFVSFVKKSEAETAIT 156
Query: 202 DLTGKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQ 261
+ G+WLGSR IR NWAT+ + ++ + E+ N SS P N
Sbjct: 157 AMNGQWLGSRSIRTNWATRKPPATKADMNAKPLTFDEVYNQSS-----------PTNCTV 205
Query: 262 YTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGN 321
Y G L+ + + L + F G I+E+RV +DKG+ FVR+ST A AI N
Sbjct: 206 YCGGINGALSGFLNEEILQKTFSPY--GTIQEIRVFKDKGYAFVRFSTKEAATHAIVAVN 263
Query: 322 TTQSSYLFGKQMKCSWGSKPTPP 344
T+ + + +KC+WG + P
Sbjct: 264 NTEINQ---QPVKCAWGKESGDP 283
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/214 (21%), Positives = 88/214 (41%), Gaps = 40/214 (18%)
Query: 59 VYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKS----SYGFIHYFDRRSAAMAILSL 114
++VG++ ++ L++ F+ G + C+++R ++ YGF+ + + A AI ++
Sbjct: 99 IFVGDLSAEIETQQLKDAFTPFGEISDCRVVRDPQTLKSKGYGFVSFVKKSEAETAITAM 158
Query: 115 NGRHLFGQPIKVNWA---------------------YASGQREDTSGHFNIFVGDLSPEV 153
NG+ L + I+ NWA Y + + + G LS +
Sbjct: 159 NGQWLGSRSIRTNWATRKPPATKADMNAKPLTFDEVYNQSSPTNCTVYCGGINGALSGFL 218
Query: 154 TDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQI 213
+ L FS Y + + RV D +G+ FV F ++ A AI + + + +
Sbjct: 219 NEEILQKTFSPYGTIQEIRVFKD------KGYAFVRFSTKEAATHAIVAVNNTEINQQPV 272
Query: 214 RCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDG 247
+C W K+S D + + G+ G
Sbjct: 273 KCAWG---------KESGDPNHMSAIAGGALAQG 297
>gi|240280986|gb|EER44489.1| mRNA binding post-transcriptional regulator [Ajellomyces capsulatus
H143]
gi|325092520|gb|EGC45830.1| mRNA binding post-transcriptional regulator [Ajellomyces capsulatus
H88]
Length = 399
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 93/299 (31%), Positives = 145/299 (48%), Gaps = 25/299 (8%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS-----YGFIHYFDRRSAAMAIL 112
++++G + + E ++ ++ G K+IR DK S Y F+ F +AA L
Sbjct: 66 TLWMGELEPWIDENFIRNLWFQMGEQVNVKMIR-DKFSGSNAGYCFVD-FTTPAAAAKAL 123
Query: 113 SLNGRHL--FGQPIKVNWAYASG----QREDTSGHFNIFVGDLSPEVTDATLFACF-SVY 165
+L+G + + K+NWA G RE+ F+IFVGDL PEV + L + F S +
Sbjct: 124 TLSGTPIPNTSRTFKLNWASGGGLADRSREERGPEFSIFVGDLGPEVNEYVLVSLFQSRF 183
Query: 166 PSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT-KGAGN 224
PSC A++M D +G SRG+GFV F ++ D Q A+ ++ G + G+R +R + AT K G
Sbjct: 184 PSCKSAKIMTDPISGMSRGYGFVRFSDETDQQRALTEMQGVYCGNRPMRISTATPKNKGA 243
Query: 225 NEDKQSSDAKSVVELTNGSSEDGKETTNTEAPE-----NNPQYTTVYVGNLAPEVTQLDL 279
+ G AP+ +P TTV+VG L+ VT+ +L
Sbjct: 244 GAGPGAMGMPGAGPAGMFPPMGGPPMGYYGAPQPMNQFTDPNNTTVFVGGLSGYVTEDEL 303
Query: 280 HRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWG 338
F G G I V++ KG GFV++ A +AI N Q + +++ SWG
Sbjct: 304 RSFFQ--GFGEITYVKIPPGKGCGFVQFVQRHAAEMAI---NQMQGYPIGNSRVRLSWG 357
>gi|391868084|gb|EIT77307.1| RRM domain protein [Aspergillus oryzae 3.042]
Length = 395
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 96/299 (32%), Positives = 149/299 (49%), Gaps = 27/299 (9%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS-----YGFIHYFDRRSAAMAIL 112
++++G + + E ++ ++ G K+IR DK S Y F+ F +AA L
Sbjct: 65 TLWMGELEPWIDENFVRNLWFQMGEQVNVKMIR-DKFSGSNAGYCFVD-FSSPAAAAKAL 122
Query: 113 SLNGRHL--FGQPIKVNWAYASG----QREDTSGHFNIFVGDLSPEVTDATLFACF-SVY 165
SLNG + + K+NWA G R+D ++IFVGDL PEV + L + F S +
Sbjct: 123 SLNGTPMPNTNRLFKLNWATGGGLADRSRDDRGPEYSIFVGDLGPEVNEYVLVSLFQSRF 182
Query: 166 PSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT---KGA 222
PSC A++M D +G SRG+GFV F ++ D Q A++++ G + G+R +R + AT KG
Sbjct: 183 PSCKSAKIMTDPISGMSRGYGFVRFSDENDQQRALSEMQGVYCGNRPMRISTATPKNKGP 242
Query: 223 GNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPEN---NPQYTTVYVGNLAPEVTQLDL 279
G + + G+ G P N +P TTV+VG L+ VT+ +L
Sbjct: 243 GVVPGGMGMPGPAGMYPPMGAPPMG--FYGAPQPMNQFTDPNNTTVFVGGLSGYVTEDEL 300
Query: 280 HRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWG 338
F G G I V++ KG GFV++ A +AI N Q + +++ SWG
Sbjct: 301 RSFFQ--GFGEITYVKIPPGKGCGFVQFVQRHAAEMAI---NQMQGYPIGNSRVRLSWG 354
>gi|389643224|ref|XP_003719244.1| tRNA selenocysteine-associated protein 1 [Magnaporthe oryzae 70-15]
gi|351639013|gb|EHA46877.1| tRNA selenocysteine-associated protein 1 [Magnaporthe oryzae 70-15]
gi|440462667|gb|ELQ32668.1| tRNA selenocysteine-associated protein 1 [Magnaporthe oryzae Y34]
gi|440489843|gb|ELQ69456.1| tRNA selenocysteine-associated protein 1 [Magnaporthe oryzae P131]
Length = 415
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 94/329 (28%), Positives = 157/329 (47%), Gaps = 45/329 (13%)
Query: 42 IPSGNLPPGFDPSTCRSVYVGNIHTQVTEPLLQEVFSST-GPVEGCKLIRKDKSS---YG 97
+P GN + +++++G + + E +++++S+ G K+IR +S Y
Sbjct: 39 VPQGN-------DSAKTLWMGELEPWMDENFIKQIWSTVCGETVNVKVIRDRQSGNAGYC 91
Query: 98 FIHYFDRRSAAMAILSLNGRHLFG--QPIKVNWAYASG---QREDTSGHFNIFVGDLSPE 152
F+ F AA L LNG + + K+NWA G +R++ ++IFVGDL PE
Sbjct: 92 FVE-FPSSEAATKALGLNGSPVPNSQRVFKLNWASGGGLVDRRDERGPEYSIFVGDLGPE 150
Query: 153 VTDATLFACFSV-YPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSR 211
V + L + F +PSC A++M D TG+SRG+GFV F ++ D Q A+ ++ G + G+R
Sbjct: 151 VNEFVLVSLFQARFPSCKSAKIMTDAMTGQSRGYGFVRFTDESDQQRALVEMQGVYCGNR 210
Query: 212 QIRCNWATKGAGNNED--KQSSDAKSVVELTN-------GSSEDGKETTNTEAPE----- 257
+R + AT +++ Q + +T G + G + P
Sbjct: 211 PMRISTATPKTRSHQQYGNQGPHGAGPMNMTPPAQNMQWGMNPYGYQQPQAPPPNTAFNN 270
Query: 258 --------NNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYST 309
+P TTV+VG L+ VT+ +L F G G I V++ KG GFV++
Sbjct: 271 PMQPMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQ--GFGDITYVKIPPGKGCGFVQFVH 328
Query: 310 HAEAALAIQMGNTTQSSYLFGKQMKCSWG 338
A +AI N Q + +++ SWG
Sbjct: 329 RHAAEMAI---NQMQGYPIGNSRVRLSWG 354
>gi|195391714|ref|XP_002054505.1| GJ22770 [Drosophila virilis]
gi|194152591|gb|EDW68025.1| GJ22770 [Drosophila virilis]
Length = 401
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 72/200 (36%), Positives = 107/200 (53%), Gaps = 16/200 (8%)
Query: 141 HFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAI 200
F+IFVGDLS E+ L F+ + SD RV+ D +T +S+G+GFVSF + +A++AI
Sbjct: 66 QFHIFVGDLSAEIETQQLKDAFTPFGEISDCRVVRDPQTLKSKGYGFVSFVKKSEAETAI 125
Query: 201 NDLTGKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNP 260
+ G+WLGSR IR NWAT+ + + + E+ N SS P N
Sbjct: 126 TAMNGQWLGSRSIRTNWATRKPPATKADMNIKPLTFDEVYNQSS-----------PTNCT 174
Query: 261 QYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMG 320
Y G L+ + + L + F G I+E+RV +DKG+ FVR+ST A AI
Sbjct: 175 VYCGGINGALSGFLNEEILQKTFSPY--GTIQEIRVFKDKGYAFVRFSTKEAATHAIVAV 232
Query: 321 NTTQSSYLFGKQMKCSWGSK 340
N T+ + + +KC+WG +
Sbjct: 233 NNTE---INQQPVKCAWGKE 249
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 41/192 (21%), Positives = 81/192 (42%), Gaps = 31/192 (16%)
Query: 59 VYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKS----SYGFIHYFDRRSAAMAILSL 114
++VG++ ++ L++ F+ G + C+++R ++ YGF+ + + A AI ++
Sbjct: 69 IFVGDLSAEIETQQLKDAFTPFGEISDCRVVRDPQTLKSKGYGFVSFVKKSEAETAITAM 128
Query: 115 NGRHLFGQPIKVNWA---------------------YASGQREDTSGHFNIFVGDLSPEV 153
NG+ L + I+ NWA Y + + + G LS +
Sbjct: 129 NGQWLGSRSIRTNWATRKPPATKADMNIKPLTFDEVYNQSSPTNCTVYCGGINGALSGFL 188
Query: 154 TDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQI 213
+ L FS Y + + RV D +G+ FV F ++ A AI + + + +
Sbjct: 189 NEEILQKTFSPYGTIQEIRVFKD------KGYAFVRFSTKEAATHAIVAVNNTEINQQPV 242
Query: 214 RCNWATKGAGNN 225
+C W + N
Sbjct: 243 KCAWGKESGDPN 254
>gi|30682335|ref|NP_849641.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|332190644|gb|AEE28765.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 306
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 85/280 (30%), Positives = 132/280 (47%), Gaps = 34/280 (12%)
Query: 43 PSGNLPPGFDPSTC---RSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS---- 95
P PP P+T R++++G++ + E L F+ TG + K+IR ++
Sbjct: 45 PQAAAPPSVQPTTADEIRTLWIGDLQYWMDENFLYGCFAHTGEMVSAKVIRNKQTGQVEG 104
Query: 96 YGFIHYFDRRSAAMAILSLNGRHLFGQP---IKVNWA-YASGQREDTSGHFNIFVGDLSP 151
YGFI + +A + + N + P ++NWA +SG + D S + IFVGDL+
Sbjct: 105 YGFIEFASHAAAERVLQTFNNAPIPSFPDQLFRLNWASLSSGDKRDDSPDYTIFVGDLAA 164
Query: 152 EVTDATLFACF-SVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGS 210
+VTD L F + YPS A+V+ D+ TGR++G+GFV F ++ + A+ ++ G +
Sbjct: 165 DVTDYILLETFRASYPSVKGAKVVIDRVTGRTKGYGFVRFSDESEQIRAMTEMNGVPCST 224
Query: 211 RQIRCNWAT--KGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVG 268
R +R A KG D S A V +N+P TTV+VG
Sbjct: 225 RPMRIGPAASKKGVTGQRDSYQSSAAGVTT------------------DNDPNNTTVFVG 266
Query: 269 NLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYS 308
L VT L F G I V++ K GFV++S
Sbjct: 267 GLDASVTDDHLKNVFSQYGE--IVHVKIPAGKRCGFVQFS 304
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 83/187 (44%), Gaps = 39/187 (20%)
Query: 143 NIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAIND 202
+++GDL + + L+ CF+ A+V+ +++TG+ G+GF+ F + A+ +
Sbjct: 63 TLWIGDLQYWMDENFLYGCFAHTGEMVSAKVIRNKQTGQVEGYGFIEFASHAAAERVLQT 122
Query: 203 LTGKWLGS---RQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENN 259
+ S + R NWA+ +G+ D ++
Sbjct: 123 FNNAPIPSFPDQLFRLNWASLSSGDKRD------------------------------DS 152
Query: 260 PQYTTVYVGNLAPEVTQLDLHRHFHS-----LGAGVIEEVRVQRDKGFGFVRYSTHAEAA 314
P YT ++VG+LA +VT L F + GA V+ + R KG+GFVR+S +E
Sbjct: 153 PDYT-IFVGDLAADVTDYILLETFRASYPSVKGAKVVIDRVTGRTKGYGFVRFSDESEQI 211
Query: 315 LAIQMGN 321
A+ N
Sbjct: 212 RAMTEMN 218
>gi|336275731|ref|XP_003352619.1| hypothetical protein SMAC_01453 [Sordaria macrospora k-hell]
gi|380094509|emb|CCC07889.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 517
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 99/320 (30%), Positives = 160/320 (50%), Gaps = 31/320 (9%)
Query: 43 PSGNLPPGFDPSTCRSVYVGNIHTQVTEPLLQEVFSST-GPVEGCKLIRKDKSS---YGF 98
P+ + PG + ++ +++++G + + E ++ VF++ G K+IR S Y F
Sbjct: 30 PTALVQPGTNEAS-KTLWMGEMEGWMDENFIKNVFTTVLGENVQVKVIRDRNSGNAGYCF 88
Query: 99 IHYFDRRSAAMAILSLNGRHL--FGQPIKVNWAYASG---QREDTSGHFNIFVGDLSPEV 153
I F AA L+LNG + + K+NWA G +R+D ++IFVGDL PEV
Sbjct: 89 IE-FASAEAAQKALNLNGTPVPNSNRAFKLNWASGGGLIDRRDDRGPEYSIFVGDLGPEV 147
Query: 154 TDATLFACF-SVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQ 212
+ L + F S +PSC A++M D TG+SRG+GFV F ++ D Q A+ ++ G + G+R
Sbjct: 148 NEFVLVSLFQSRFPSCKSAKIMTDAMTGQSRGYGFVRFSDEGDQQRALVEMQGVYCGNRP 207
Query: 213 IRCNWATKGA-----GNNEDKQSSDAKSVVELTNGSSEDG------KETTNTEAPEN--- 258
+R + AT G + ++ + V + + G N P N
Sbjct: 208 MRISTATPKTRTHQYGAHAPHAANAMMAPVPAHAANMQWGVPPQPYYSGFNPMQPMNQFT 267
Query: 259 NPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQ 318
+P TTV+VG L+ VT+ +L F G G I V++ KG GFV++ A +AI
Sbjct: 268 DPNNTTVFVGGLSGYVTEDELRSFFQ--GFGEITYVKIPPGKGCGFVQFVHRHAAEMAI- 324
Query: 319 MGNTTQSSYLFGKQMKCSWG 338
N Q + +++ SWG
Sbjct: 325 --NQMQGYPIGNSRVRLSWG 342
>gi|224284226|gb|ACN39849.1| unknown [Picea sitchensis]
Length = 429
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 89/297 (29%), Positives = 143/297 (48%), Gaps = 29/297 (9%)
Query: 56 CRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS----YGFIHYFDRRSAAMAI 111
++++VG++ + E L FS TG + K+IR + YGF+ + R +A +
Sbjct: 91 VKTLWVGDLQFWMDEGYLHTCFSHTGELVSAKIIRNKYTGQSEGYGFMEFITRTAAEKIM 150
Query: 112 LSLNGRHL--FGQPIKVNWA-YASGQRE-DTSGHFNIFVGDLSPEVTDATLFACF-SVYP 166
+ NG + Q ++NWA ++ G+R D F+IFVGDL +V+D L F S Y
Sbjct: 151 QTYNGTLMPNTEQVFRMNWATFSMGERRLDGGPDFSIFVGDLDSDVSDLVLQETFQSRYS 210
Query: 167 SCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT--KGAGN 224
S A+V+ D TGRS+G+GFV F + + A+ ++ G + +R +R + AT K AG
Sbjct: 211 SVKAAKVVMDANTGRSKGYGFVRFGEESERARAMTEMNGVYCSTRPMRISAATPRKSAG- 269
Query: 225 NEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFH 284
V+ +G +N+ TT++VG L P T DL + F
Sbjct: 270 ------------VQHQYSGRGNGGSHAQGFPSDNDLNNTTIFVGRLDPNATDEDLRQVFG 317
Query: 285 SLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSKP 341
G V V++ KG GFV++ A A A+Q + + + ++ SWG P
Sbjct: 318 QYGELV--SVKIPVGKGCGFVQFGNRASAEEALQ---RLHGTVIRQQTVRLSWGRSP 369
>gi|261199113|ref|XP_002625958.1| mRNA binding post-transcriptional regulator [Ajellomyces
dermatitidis SLH14081]
gi|239595110|gb|EEQ77691.1| mRNA binding post-transcriptional regulator [Ajellomyces
dermatitidis SLH14081]
gi|327353834|gb|EGE82691.1| hypothetical protein BDDG_05635 [Ajellomyces dermatitidis ATCC
18188]
Length = 399
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 93/299 (31%), Positives = 145/299 (48%), Gaps = 25/299 (8%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS-----YGFIHYFDRRSAAMAIL 112
++++G + + E ++ ++ G K+IR DK S Y F+ F +AA L
Sbjct: 66 TLWMGELEPWIDENFIRNLWFQMGEQVNVKMIR-DKFSGSNAGYCFVD-FTTPAAAAKAL 123
Query: 113 SLNGRHL--FGQPIKVNWAYASG----QREDTSGHFNIFVGDLSPEVTDATLFACF-SVY 165
+L+G + + K+NWA G RE+ F+IFVGDL PEV + L + F S +
Sbjct: 124 TLSGTPIPNTSRTFKLNWASGGGLADRSREERGPEFSIFVGDLGPEVNEYVLVSLFQSRF 183
Query: 166 PSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT-KGAGN 224
PSC A++M D +G SRG+GFV F ++ D Q A+ ++ G + G+R +R + AT K G
Sbjct: 184 PSCKSAKIMTDPISGMSRGYGFVRFSDETDQQRALTEMQGVYCGNRPMRISTATPKNKGP 243
Query: 225 NEDKQSSDAKSVVELTNGSSEDGKETTNTEAPE-----NNPQYTTVYVGNLAPEVTQLDL 279
+ G AP+ +P TTV+VG L+ VT+ +L
Sbjct: 244 GAGPGAMGMPGAGPAGMYPPMGGPPMGYYGAPQPMNQFTDPNNTTVFVGGLSGYVTEDEL 303
Query: 280 HRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWG 338
F G G I V++ KG GFV++ A +AI N Q + +++ SWG
Sbjct: 304 RSFFQ--GFGEITYVKIPPGKGCGFVQFVQRHAAEMAI---NQMQGYPIGNSRVRLSWG 357
>gi|298706390|emb|CBJ29399.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 434
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 92/293 (31%), Positives = 145/293 (49%), Gaps = 39/293 (13%)
Query: 54 STCRSVYVGNIHTQVTEPLLQEVFSS-TGPVEGCKLIRKDK----SSYGFIHYFDRRSAA 108
S +++++G++ TE ++ +FSS G KLIR + YGFI + + +A
Sbjct: 13 SAAKTLWLGDVQPDWTEEYVESLFSSIVGQELEVKLIRDRHRGIVAGYGFIDFRNHETAQ 72
Query: 109 MAILSLNGRHLFGQPIK--VNWAYASGQREDTSGHFNIFVGDLSPEVTDATLFACF-SVY 165
+ + SLNG+ + G ++ +NW A G+R + + +++FVGDLSPEVTDA L A F Y
Sbjct: 73 LVLDSLNGKPIEGTSLRYRLNWG-AGGKRIEQAPEYSVFVGDLSPEVTDAELKATFLGKY 131
Query: 166 PSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNN 225
S A+V+ + TG S+ FGF+ F ++Q+ A+ + G R IR ATK
Sbjct: 132 TSVLGAKVVTNPMTGSSKSFGFIRFGDEQERDEALTAMNGAECCGRPIRVAPATK----- 186
Query: 226 EDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHS 285
++ V+ G A +P TTV+VG + VT+ L F+S
Sbjct: 187 --------RTSVQGQTG------------AHATDPSNTTVFVGGINDSVTEKVLRDTFNS 226
Query: 286 LGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWG 338
AG I+ V +G FV ++ A A I N Q + + G ++ SWG
Sbjct: 227 --AGEIQTVTTPPGRGCAFVTFAHRASAEHVI---NNMQGTTVCGSCVRLSWG 274
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 80/176 (45%), Gaps = 18/176 (10%)
Query: 58 SVYVGNIHTQVTEPLLQEVF-SSTGPVEGCKLIRK----DKSSYGFIHYFDRRSAAMAIL 112
SV+VG++ +VT+ L+ F V G K++ S+GFI + D + A+
Sbjct: 108 SVFVGDLSPEVTDAELKATFLGKYTSVLGAKVVTNPMTGSSKSFGFIRFGDEQERDEALT 167
Query: 113 SLNGRHLFGQPIKVNWAYASGQREDTSG-------HFNIFVGDLSPEVTDATLFACFSVY 165
++NG G+PI+V A + +G + +FVG ++ VT+ L F+
Sbjct: 168 AMNGAECCGRPIRVAPATKRTSVQGQTGAHATDPSNTTVFVGGINDSVTEKVLRDTFN-- 225
Query: 166 PSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKG 221
A + T RG FV+F ++ A+ IN++ G + +R +W G
Sbjct: 226 ----SAGEIQTVTTPPGRGCAFVTFAHRASAEHVINNMQGTTVCGSCVRLSWGKSG 277
>gi|322694638|gb|EFY86462.1| mRNA binding post-transcriptional regulator [Metarhizium acridum
CQMa 102]
Length = 384
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 97/315 (30%), Positives = 152/315 (48%), Gaps = 30/315 (9%)
Query: 48 PPGFDPSTCRS-VYVGNIHTQVTEPLLQEVF-SSTGPVEGCKLIRKDKSS---YGFIHYF 102
PP P ++ +++G + + E ++ VF S+ G K+IR S Y F+ F
Sbjct: 18 PPAGGPEQPKTTLWMGELEPWMDENFIKGVFLSAAGETVNVKVIRDKNSGNAGYCFVE-F 76
Query: 103 DRRSAAMAILSLNGRHL--FGQPIKVNWAYASG---QREDTSGHFNIFVGDLSPEVTDAT 157
AA L LNG + + K+NWA G +R+D ++IFVGDL PEV +
Sbjct: 77 TTPEAATKALGLNGTPVPNSSRQFKLNWASGGGLVDRRDDRGPEYSIFVGDLGPEVNEYV 136
Query: 158 LFACFSV-YPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCN 216
L + F +PSC A++M D +G+SRG+GFV F ++ D Q A+ ++ G + G+R +R +
Sbjct: 137 LVSLFQARFPSCKSAKIMTDAMSGQSRGYGFVRFSDENDQQRALVEMQGVYCGNRPMRIS 196
Query: 217 WAT-KGAGNNEDKQSSDAKSVVELTNGSSED-----------GKETTNTEAPE-NNPQYT 263
AT K GN+ + G + G T+ + +P T
Sbjct: 197 TATPKNRGNHGFGGPGHHAGGAPMMGGVPQQPMWGGMQGFPYGGYNPATQMNQFTDPNNT 256
Query: 264 TVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTT 323
TV+VG L+ VT+ +L F G G I V++ KG GFV++ A +AI N
Sbjct: 257 TVFVGGLSGYVTEDELRSFFQ--GFGEITYVKIPPGKGCGFVQFVHRHAAEMAI---NQM 311
Query: 324 QSSYLFGKQMKCSWG 338
Q + +++ SWG
Sbjct: 312 QGYPIGNSRVRLSWG 326
>gi|46122719|ref|XP_385913.1| hypothetical protein FG05737.1 [Gibberella zeae PH-1]
Length = 409
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 95/305 (31%), Positives = 148/305 (48%), Gaps = 30/305 (9%)
Query: 58 SVYVGNIHTQVTEPLLQEVF-SSTGPVEGCKLIRKDKSS---YGFIHYFDRRSAAMAILS 113
++++G + + E ++ VF SS K+IR S Y F+ F AA L+
Sbjct: 50 TLWMGELEPWMDENFIKGVFLSSAHENVNVKVIRDKNSGNAGYCFVE-FQSPEAATKALN 108
Query: 114 LNGRHL--FGQPIKVNWAYASG---QREDTSGHFNIFVGDLSPEVTDATLFACFSV-YPS 167
+NG + + K+NWA G +R+D ++IFVGDL PEV + L + F +PS
Sbjct: 109 MNGSQVPNSSRSFKLNWASGGGLVDRRDDRGPEYSIFVGDLGPEVNEYVLVSLFQARFPS 168
Query: 168 CSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT-KGAGNNE 226
C A++M D +G+SRG+GFV F ++ D Q A+ ++ G + G+R +R + AT K GN+
Sbjct: 169 CKSAKIMTDAMSGQSRGYGFVRFSDENDQQRALVEMQGVYCGNRPMRISTATPKNRGNHG 228
Query: 227 DKQSSDAKSVV--------ELTNGSSEDG--KETTNTEAPEN---NPQYTTVYVGNLAPE 273
++ NG G N N +P TTV+VG L+
Sbjct: 229 FGGQGHQHGGPMMPGMPQQQMWNGGGMQGFPYGGFNPATQMNQFTDPNNTTVFVGGLSGY 288
Query: 274 VTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQM 333
VT+ +L F G G I V++ KG GFV++ A +AI N Q + ++
Sbjct: 289 VTEDELRSFFQ--GFGEITYVKIPPGKGCGFVQFVHRHAAEMAI---NQMQGYPIGNSRV 343
Query: 334 KCSWG 338
+ SWG
Sbjct: 344 RLSWG 348
>gi|147781769|emb|CAN74486.1| hypothetical protein VITISV_029928 [Vitis vinifera]
Length = 434
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 82/225 (36%), Positives = 127/225 (56%), Gaps = 15/225 (6%)
Query: 122 QPIKVNWA-YASG-QREDTSGHFNIFVGDLSPEVTDATLFACFSV-YPSCSDARVMWDQK 178
QP ++NWA +++G +R D +IFVGDL+ +VTDA L F+ YPS A+V+ D
Sbjct: 172 QPFRLNWATFSTGDRRTDAGSDLSIFVGDLASDVTDALLQETFATRYPSVKGAKVVTDSN 231
Query: 179 TGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT-KGAGNNEDKQSSDAKSVV 237
TGRS+G+GFV F ++ + A+N++ G + SR +R AT K A + + SS A +
Sbjct: 232 TGRSKGYGFVRFGDENERSRAMNEMNGIYCSSRPMRIGVATPKKASGYQQQYSSQA---L 288
Query: 238 ELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQ 297
L G++ +G ++A ++ TT++VG L EVT DL + F G + V++
Sbjct: 289 VLAGGNASNGAVAQGSQANGDSTN-TTIFVGGLDSEVTDEDLRQSFSQFGE--VVSVKIP 345
Query: 298 RDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQ-MKCSWGSKP 341
KG GFV+++ A A+Q N T + GKQ ++ SWG P
Sbjct: 346 VGKGCGFVQFANRNSAEDALQRLNGT----VIGKQTVRLSWGRNP 386
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 96/216 (44%), Gaps = 44/216 (20%)
Query: 52 DPSTCRSVYVGNIHTQVTEPLLQEVFSSTGP-VEGCKLIRKDKS----SYGFIHYFDRRS 106
D + S++VG++ + VT+ LLQE F++ P V+G K++ + YGF+ + D
Sbjct: 189 DAGSDLSIFVGDLASDVTDALLQETFATRYPSVKGAKVVTDSNTGRSKGYGFVRFGDENE 248
Query: 107 AAMAILSLNGRHLFGQPIKV----------------------------NWAYASG-QRED 137
+ A+ +NG + +P+++ N A A G Q
Sbjct: 249 RSRAMNEMNGIYCSSRPMRIGVATPKKASGYQQQYSSQALVLAGGNASNGAVAQGSQANG 308
Query: 138 TSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQ 197
S + IFVG L EVTD L FS + ++ +G GFV F N+ A+
Sbjct: 309 DSTNTTIFVGGLDSEVTDEDLRQSFSQFGEVVSVKI------PVGKGCGFVQFANRNSAE 362
Query: 198 SAINDLTGKWLGSRQIRCNW----ATKGAGNNEDKQ 229
A+ L G +G + +R +W A+K N+ + Q
Sbjct: 363 DALQRLNGTVIGKQTVRLSWGRNPASKQWRNDSNNQ 398
>gi|222640040|gb|EEE68172.1| hypothetical protein OsJ_26296 [Oryza sativa Japonica Group]
Length = 329
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 85/280 (30%), Positives = 137/280 (48%), Gaps = 31/280 (11%)
Query: 70 EPLLQEVFSSTGPVEGCKLIRKDKSS----YGFIHYFDRRSAAMAILSLNGRHL--FGQP 123
E + F+ TG ++ KLIR ++ YGFI + A + + NG + Q
Sbjct: 3 ENTVSACFAPTGELQSVKLIRDKQTGQLQGYGFIEFTSHAGAERVLQTYNGAMMPNVEQT 62
Query: 124 IKVNWAYASGQREDTSGHFNIFVGDLSPEVTDATLFACFSV-YPSCSDARVMWDQKTGRS 182
++NWA A +R+DT + IFVGDL+ +VTD L F V YPS A+V+ D+ T RS
Sbjct: 63 YRLNWASAGEKRDDTP-DYTIFVGDLAADVTDYILQETFRVHYPSVKGAKVVTDKMTMRS 121
Query: 183 RGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNG 242
+G+GFV F + + A+ ++ G SR +R G +K+++ + V G
Sbjct: 122 KGYGFVKFGDPSEQARAMTEMNGMVCSSRPMRI-------GPAANKKATGVQEKVPSAQG 174
Query: 243 SSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDKGF 302
D ++P TT++VG L P VT L + F G + V++ K
Sbjct: 175 VQSD-----------SDPSNTTIFVGGLDPSVTDDMLKQVFTPYGD--VVHVKIPVGKRC 221
Query: 303 GFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSKPT 342
GFV+++ A A A+ + Q + + G+ ++ SWG P+
Sbjct: 222 GFVQFANRASADEALVL---LQGTLIGGQNVRLSWGRSPS 258
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 86/186 (46%), Gaps = 27/186 (14%)
Query: 52 DPSTCRSVYVGNIHTQVTEPLLQEVFSSTGP-VEGCKLIRKDKSS-----YGFIHYFDRR 105
D + +++VG++ VT+ +LQE F P V+G K++ DK + YGF+ + D
Sbjct: 75 DDTPDYTIFVGDLAADVTDYILQETFRVHYPSVKGAKVV-TDKMTMRSKGYGFVKFGDPS 133
Query: 106 SAAMAILSLNGRHLFGQPIKVNWAY-------------ASGQREDTS-GHFNIFVGDLSP 151
A A+ +NG +P+++ A A G + D+ + IFVG L P
Sbjct: 134 EQARAMTEMNGMVCSSRPMRIGPAANKKATGVQEKVPSAQGVQSDSDPSNTTIFVGGLDP 193
Query: 152 EVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSR 211
VTD L F+ Y ++ ++ G FV F N+ A A+ L G +G +
Sbjct: 194 SVTDDMLKQVFTPYGDVVHVKIPVGKRCG------FVQFANRASADEALVLLQGTLIGGQ 247
Query: 212 QIRCNW 217
+R +W
Sbjct: 248 NVRLSW 253
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 48/85 (56%), Gaps = 3/85 (3%)
Query: 52 DPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSSYGFIHYFDRRSAAMAI 111
DPS +++VG + VT+ +L++VF+ G V K+ + GF+ + +R SA A+
Sbjct: 180 DPSNT-TIFVGGLDPSVTDDMLKQVFTPYGDVVHVKIPVGKRC--GFVQFANRASADEAL 236
Query: 112 LSLNGRHLFGQPIKVNWAYASGQRE 136
+ L G + GQ ++++W + R+
Sbjct: 237 VLLQGTLIGGQNVRLSWGRSPSNRQ 261
>gi|30524689|emb|CAC85246.1| salt tolerance protein 6 [Beta vulgaris]
Length = 322
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 94/286 (32%), Positives = 143/286 (50%), Gaps = 36/286 (12%)
Query: 68 VTEPLLQEVFSSTGPVEGCKLIRKDKS----SYGFIHYFDRRSAAMAILSLNGRHLF--- 120
+ E ++ F+ +G + K+IR ++ YGFI F +AA IL L
Sbjct: 1 MDENYIRTCFAQSGELVNVKIIRNKQTMQSECYGFIE-FSTHAAAERILQTYNNTLMPNV 59
Query: 121 GQPIKVNWA-YASGQR--EDTSGHFNIFVGDLSPEVTDATLFACFSV-YPSCSDARVMWD 176
Q ++NWA Y SG++ ED S + IFVGDL+P+VTD TL F V YPS A+V+ D
Sbjct: 60 EQNYRLNWAFYGSGEKRGEDAS-DYTIFVGDLAPDVTDYTLQETFRVRYPSVKGAKVVID 118
Query: 177 QKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSSDAKSV 236
+ T RS+G+GFV F ++ + A++++ G R +R GA N+ A
Sbjct: 119 RLTSRSKGYGFVRFGDESEQARAMSEMNGMMCLGRAMRI-----GAAANKKSVGGTA--- 170
Query: 237 VELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRV 296
S ++ + T N P N TT++VGNL VT L + F G V V++
Sbjct: 171 ------SYQNNQGTPNDSDPSN----TTIFVGNLDSNVTDEHLRQTFSPYGELV--HVKI 218
Query: 297 QRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSKPT 342
K GFV+++ + A A+++ N Q L G+ ++ SWG P
Sbjct: 219 PAGKQCGFVQFTNRSSAEEALRVLNGMQ---LGGRNVRLSWGRSPN 261
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 81/179 (45%), Gaps = 25/179 (13%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGP-VEGCKLIRKDKSS----YGFIHYFDRRSAAMAIL 112
+++VG++ VT+ LQE F P V+G K++ +S YGF+ + D A A+
Sbjct: 84 TIFVGDLAPDVTDYTLQETFRVRYPSVKGAKVVIDRLTSRSKGYGFVRFGDESEQARAMS 143
Query: 113 SLNGRHLFGQPIKVNWAYASGQREDTSGHFN--------------IFVGDLSPEVTDATL 158
+NG G+ +++ A T+ + N IFVG+L VTD L
Sbjct: 144 EMNGMMCLGRAMRIGAAANKKSVGGTASYQNNQGTPNDSDPSNTTIFVGNLDSNVTDEHL 203
Query: 159 FACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNW 217
FS Y ++ ++ GFV F N+ A+ A+ L G LG R +R +W
Sbjct: 204 RQTFSPYGELVHVKIPAGKQC------GFVQFTNRSSAEEALRVLNGMQLGGRNVRLSW 256
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 49/89 (55%), Gaps = 3/89 (3%)
Query: 48 PPGFDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSSYGFIHYFDRRSA 107
P DPS +++VGN+ + VT+ L++ FS G + K+ + GF+ + +R SA
Sbjct: 179 PNDSDPSNT-TIFVGNLDSNVTDEHLRQTFSPYGELVHVKIPAGKQC--GFVQFTNRSSA 235
Query: 108 AMAILSLNGRHLFGQPIKVNWAYASGQRE 136
A+ LNG L G+ ++++W + R+
Sbjct: 236 EEALRVLNGMQLGGRNVRLSWGRSPNNRQ 264
>gi|238498926|ref|XP_002380698.1| mRNA binding post-transcriptional regulator (Csx1), putative
[Aspergillus flavus NRRL3357]
gi|220693972|gb|EED50317.1| mRNA binding post-transcriptional regulator (Csx1), putative
[Aspergillus flavus NRRL3357]
Length = 427
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 97/299 (32%), Positives = 148/299 (49%), Gaps = 27/299 (9%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS-----YGFIHYFDRRSAAMAIL 112
+V +G + + E ++ ++ G K+IR DK S Y F+ F +AA L
Sbjct: 89 NVRMGELEPWIDENFVRNLWFQMGEQVNVKMIR-DKFSGSNAGYCFVD-FSSPAAAAKAL 146
Query: 113 SLNGRHL--FGQPIKVNWAYASG----QREDTSGHFNIFVGDLSPEVTDATLFACF-SVY 165
SLNG + + K+NWA G R+D ++IFVGDL PEV + L + F S +
Sbjct: 147 SLNGTPMPNTNRLFKLNWATGGGLADRSRDDRGPEYSIFVGDLGPEVNEYVLVSLFQSRF 206
Query: 166 PSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT---KGA 222
PSC A++M D +G SRG+GFV F ++ D Q A++++ G + G+R +R + AT KG
Sbjct: 207 PSCKSAKIMTDPISGMSRGYGFVRFSDENDQQRALSEMQGVYCGNRPMRISTATPKNKGP 266
Query: 223 GNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPEN---NPQYTTVYVGNLAPEVTQLDL 279
G + + G+ G P N +P TTV+VG L+ VT+ +L
Sbjct: 267 GVVPGGMGMPGPAGMYPPMGAPPMG--FYGAPQPMNQFTDPNNTTVFVGGLSGYVTEDEL 324
Query: 280 HRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWG 338
F G G I V++ KG GFV++ A +AI N Q + +++ SWG
Sbjct: 325 RSFFQ--GFGEITYVKIPPGKGCGFVQFVQRHAAEMAI---NQMQGYPIGNSRVRLSWG 378
>gi|400600479|gb|EJP68153.1| RNA recognition domain-containing protein [Beauveria bassiana ARSEF
2860]
Length = 410
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 91/302 (30%), Positives = 144/302 (47%), Gaps = 27/302 (8%)
Query: 58 SVYVGNIHTQVTEPLLQEVF-SSTGPVEGCKLIRKDKSS---YGFIHYFDRRSAAMAILS 113
++++G + + E ++ VF S++G K+IR S Y F+ F AA L
Sbjct: 49 TLWMGELEPWMDENFIKGVFLSASGETVNVKVIRDKNSGNAGYCFVE-FQTADAATKALG 107
Query: 114 LNGRHL--FGQPIKVNWAYASG---QREDTSGHFNIFVGDLSPEVTDATLFACFSV-YPS 167
LNG + + K+NWA G +R+D ++IFVGDL PEV + L + F +PS
Sbjct: 108 LNGNPVPNSSRQFKLNWASGGGLVDRRDDRGPEYSIFVGDLGPEVNEYVLVSLFQARFPS 167
Query: 168 CSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT-------- 219
C A++M D +G+SRG+GFV F ++ D Q A+ ++ G + G+R +R + AT
Sbjct: 168 CKSAKIMTDAMSGQSRGYGFVRFSDENDQQRALVEMQGVYCGNRPMRISTATPKNRGNHG 227
Query: 220 ---KGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQ 276
G + + G + G +P TTV+VG L+ VT+
Sbjct: 228 FGHGPHGGPMMGGGMPQQPMWNGMQGFAYGGYNPATQMNQFTDPNNTTVFVGGLSGYVTE 287
Query: 277 LDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCS 336
+L F G G I V++ KG GFV++ A +AI N Q + +++ S
Sbjct: 288 DELRSFFQ--GFGEITYVKIPPGKGCGFVQFVHRHAAEMAI---NQMQGYPIGNSRVRLS 342
Query: 337 WG 338
WG
Sbjct: 343 WG 344
>gi|326524666|dbj|BAK04269.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 408
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 95/313 (30%), Positives = 149/313 (47%), Gaps = 43/313 (13%)
Query: 58 SVYVGNIHTQVTEPLLQEVF-SSTGPVEGCKLIRKDKSS---YGFIHYFDRRSAAMAILS 113
++++G + + E ++ VF S+T K+IR S Y F+ F AA L+
Sbjct: 49 TLWMGELEPWMDENFIKGVFLSATTETVNVKVIRDKNSGNAGYCFVE-FQTPEAATKALA 107
Query: 114 LNG-------RHLFGQPIKVNWAYASG---QREDTSGHFNIFVGDLSPEVTDATLFACFS 163
LNG RH K+NWA G +R+D ++IFVGDL PEV + L + F
Sbjct: 108 LNGSGVPNSSRHF-----KLNWASGGGLVDRRDDRGPEYSIFVGDLGPEVNEYVLVSLFQ 162
Query: 164 V-YPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGA 222
+PSC A++M D +G+SRG+GFV F ++ D Q A+ ++ G + G+R +R + AT
Sbjct: 163 ARFPSCKSAKIMTDAMSGQSRGYGFVRFSDENDQQRALVEMQGVYCGNRPMRISTATPKN 222
Query: 223 GNNEDKQSSDAKSVV------ELTNGSSEDG--------KETTNTEAPEN---NPQYTTV 265
N +++ ++ G + G N N +P TTV
Sbjct: 223 RGNHGFAHGHHNAMMGGMPQQQMWAGGMQQGFPYGGGGGGGGFNPATQMNQFTDPNNTTV 282
Query: 266 YVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQS 325
+VG L+ VT+ +L F G G I V++ KG GFV++ A +AI N Q
Sbjct: 283 FVGGLSGYVTEDELRSFFQ--GFGEITYVKIPPGKGCGFVQFVHRHAAEMAI---NQMQG 337
Query: 326 SYLFGKQMKCSWG 338
+ +++ SWG
Sbjct: 338 YPIGNSRVRLSWG 350
>gi|297836592|ref|XP_002886178.1| hypothetical protein ARALYDRAFT_480759 [Arabidopsis lyrata subsp.
lyrata]
gi|297332018|gb|EFH62437.1| hypothetical protein ARALYDRAFT_480759 [Arabidopsis lyrata subsp.
lyrata]
Length = 364
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 74/212 (34%), Positives = 117/212 (55%), Gaps = 12/212 (5%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDK-----SSYGFIHYFDRRSAAMAIL 112
+VYVGN+ Q++E LL E+F GPV + KD+ +YGFI Y A AI
Sbjct: 26 TVYVGNLDAQLSEELLWELFVQAGPVVNV-YVPKDRVTNLHQNYGFIEYRSEEDADYAIK 84
Query: 113 SLNGRHLFGQPIKVNWAYASGQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPS-CSDA 171
LN + G+PI+VN A + D N+F+G+L P+V + L+ FS + S+
Sbjct: 85 VLNMIKVHGKPIRVNKASQDKKSLDVGA--NLFIGNLDPDVDEKLLYDTFSAFGVIASNP 142
Query: 172 RVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSS 231
++M D TG SRGFGF+S+ + + + +AI +TG++L +RQI ++A K E + +
Sbjct: 143 KIMRDPDTGNSRGFGFISYDSFEASDAAIEAMTGQYLSNRQITVSYAYKKDTKGE-RHGT 201
Query: 232 DAKSVVELTNGSSEDGKETT--NTEAPENNPQ 261
A+ ++ TN S++ + T + P N PQ
Sbjct: 202 PAERLLAATNPSAQKSRPHTLFASGPPSNAPQ 233
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 87/203 (42%), Gaps = 44/203 (21%)
Query: 144 IFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDL 203
++VG+L ++++ L+ F + V D+ T + +GF+ +R+++DA AI L
Sbjct: 27 VYVGNLDAQLSEELLWELFVQAGPVVNVYVPKDRVTNLHQNYGFIEYRSEEDADYAIKVL 86
Query: 204 TGKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYT 263
+ + IR N A+ +DK+S D +
Sbjct: 87 NMIKVHGKPIRVNKAS------QDKKSLDVGA---------------------------- 112
Query: 264 TVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRD------KGFGFVRYSTHAEAALAI 317
+++GNL P+V + L+ F + G + ++ RD +GFGF+ Y + + AI
Sbjct: 113 NLFIGNLDPDVDEKLLYDTFSAFGV-IASNPKIMRDPDTGNSRGFGFISYDSFEASDAAI 171
Query: 318 QMGNTTQSSYLFGKQMKCSWGSK 340
+ YL +Q+ S+ K
Sbjct: 172 E---AMTGQYLSNRQITVSYAYK 191
>gi|294884873|gb|ADF47445.1| TIA1-like protein, partial [Dugesia japonica]
Length = 430
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 91/305 (29%), Positives = 145/305 (47%), Gaps = 32/305 (10%)
Query: 57 RSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSSYGFIHYFDRRSAAMAILSLNG 116
+++Y+ N+ + ++E L +F S G C+L + ++Y I FD S+A L++N
Sbjct: 1 KTIYISNLPSPISEEDLLSIFGSFGACVSCELNLETLTAY--IE-FDNESSAEKALAMNN 57
Query: 117 RHLFGQPIKVNWAYA------------SGQREDTSGHFNIFVGDLSPEVTDATLFACFSV 164
+ + V AY + ++ D S IFVG + ++ +A L F+
Sbjct: 58 TPMESNQMSVEIAYVDNVVQNVTSYTLASKKVDYSQSVQIFVGGIGFDIDEAILKEGFAH 117
Query: 165 YPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGN 224
D +V+ G+ +GF FVSF N+ DA SAI + +R+I+CNWATK
Sbjct: 118 CGQVLDTKVVRSND-GQHKGFAFVSFSNESDANSAIQKMNNTMFHNRKIQCNWATK---- 172
Query: 225 NEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFH 284
+K S+ A + E + EAPE+N T+VYV L +T+ L F
Sbjct: 173 --NKNSNGAPFNPKFNPTKFNKTLEDISYEAPESN---TSVYV--LGESLTEELLRPIFE 225
Query: 285 SLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSKPTPP 344
G I+ V+ +K FV Y TH AA AIQ N + + + ++KC+WG K
Sbjct: 226 RFGK--IKNVKAFPEKNHAFVNYDTHDAAAYAIQQLNGYKINNI---ELKCNWGKKNAAL 280
Query: 345 GTSSN 349
G ++N
Sbjct: 281 GNANN 285
>gi|408392147|gb|EKJ71507.1| hypothetical protein FPSE_08320 [Fusarium pseudograminearum CS3096]
Length = 442
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 95/306 (31%), Positives = 148/306 (48%), Gaps = 31/306 (10%)
Query: 58 SVYVGNIHTQVTEPLLQEVF-SSTGPVEGCKLIRKDKSS---YGFIHYFDRRSAAMAILS 113
++++G + + E ++ VF SS K+IR S Y F+ F AA L+
Sbjct: 50 TLWMGELEPWMDENFIKGVFLSSAHENVNVKVIRDKNSGNAGYCFVE-FQSPEAATKALN 108
Query: 114 LNGRHL--FGQPIKVNWAYASG---QREDTSGHFNIFVGDLSPEVTDATLFACFSV-YPS 167
+NG + + K+NWA G +R+D ++IFVGDL PEV + L + F +PS
Sbjct: 109 MNGSQVPNSSRSFKLNWASGGGLVDRRDDRGPEYSIFVGDLGPEVNEYVLVSLFQARFPS 168
Query: 168 CSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT-KGAGNNE 226
C A++M D +G+SRG+GFV F ++ D Q A+ ++ G + G+R +R + AT K GN+
Sbjct: 169 CKSAKIMTDAMSGQSRGYGFVRFSDENDQQRALVEMQGVYCGNRPMRISTATPKNRGNHG 228
Query: 227 DKQSSDAKSVV---------ELTNGSSEDG--KETTNTEAPEN---NPQYTTVYVGNLAP 272
++ NG G N N +P TTV+VG L+
Sbjct: 229 FGGQGHQHGGPMMPGMPQQQQMWNGGGMQGFPYGGFNPATQMNQFTDPNNTTVFVGGLSG 288
Query: 273 EVTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQ 332
VT+ +L F G G I V++ KG GFV++ A +AI N Q + +
Sbjct: 289 YVTEDELRSFFQ--GFGEITYVKIPPGKGCGFVQFVHRHAAEMAI---NQMQGYPIGNSR 343
Query: 333 MKCSWG 338
++ SWG
Sbjct: 344 VRLSWG 349
>gi|154279514|ref|XP_001540570.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|150412513|gb|EDN07900.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 422
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 93/296 (31%), Positives = 142/296 (47%), Gaps = 25/296 (8%)
Query: 61 VGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS-----YGFIHYFDRRSAAMAILSLN 115
+G + + E ++ ++ G K+IR DK S Y F+ F +AA L+L+
Sbjct: 93 MGELEPWIDENFIRNLWFQMGEQVNVKMIR-DKFSGSNAGYCFVD-FTTPAAAAKALTLS 150
Query: 116 GRHL--FGQPIKVNWAYASG----QREDTSGHFNIFVGDLSPEVTDATLFACF-SVYPSC 168
G + + K+NWA G RE+ F+IFVGDL PEV + L + F S +PSC
Sbjct: 151 GTPIPNTSRTFKLNWASGGGLADRSREERGPEFSIFVGDLGPEVNEYVLVSLFQSRFPSC 210
Query: 169 SDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT-KGAGNNED 227
A++M D +G SRG+GFV F ++ D Q A+ ++ G + G+R +R + AT K G
Sbjct: 211 KSAKIMTDPISGMSRGYGFVRFSDETDQQRALTEMQGVYCGNRPMRISTATPKNKGAGAG 270
Query: 228 KQSSDAKSVVELTNGSSEDGKETTNTEAPE-----NNPQYTTVYVGNLAPEVTQLDLHRH 282
+ G AP+ +P TTV+VG L+ VT+ +L
Sbjct: 271 PGAMGMPGAGPAGMFPPMGGPPMGYYGAPQPMNQFTDPNNTTVFVGGLSGYVTEDELRSF 330
Query: 283 FHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWG 338
F G G I V++ KG GFV++ A +AI N Q + +++ SWG
Sbjct: 331 FQ--GFGEITYVKIPPGKGCGFVQFVQRHAAEMAI---NQMQGYPIGNSRVRLSWG 381
>gi|50725189|dbj|BAD33940.1| putative nucleic acid binding protein [Oryza sativa Japonica Group]
gi|51535291|dbj|BAD38554.1| putative nucleic acid binding protein [Oryza sativa Japonica Group]
Length = 316
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 90/286 (31%), Positives = 134/286 (46%), Gaps = 40/286 (13%)
Query: 68 VTEPLLQEVFSSTGPVEGCKLIRKDKSS----YGFIHYFDRRSAAMAILSLNGRHLF--- 120
+ E L F TG V K+IR ++ YGF+ ++ +A + G H+
Sbjct: 1 MDENYLHSCFGYTGEVVAIKVIRNKQTGQSEGYGFVEFYSHAAAEKVLEGFAG-HIMPNT 59
Query: 121 GQPIKVNWAYAS--GQREDTSGHFNIFVGDLSPEVTDATLFACFSV-YPSCSDARVMWDQ 177
QP ++NWA S +R D + +IFVGDL+ +V D TL FS Y S A+V+ D
Sbjct: 60 DQPFRINWASFSMGDRRSDIASDHSIFVGDLASDVNDTTLLETFSKRYSSVKGAKVVIDA 119
Query: 178 KTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT-KGAGNNEDKQSSDAKSV 236
TGRS+G+GFV F + + A+ ++ G + +R +R AT + S A+S
Sbjct: 120 NTGRSKGYGFVRFGDDNEKTHAMTEMNGVYCSTRPMRIGPATPRKTSGTSGPTGSAARSD 179
Query: 237 VELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRV 296
+LTN TTV+VG L P V++ DL + F G I V++
Sbjct: 180 GDLTN---------------------TTVFVGGLDPNVSEDDLRQTFSQYGE--ISSVKI 216
Query: 297 QRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQ-MKCSWGSKP 341
K GFV++ A A+Q N + GKQ ++ SWG P
Sbjct: 217 PVGKQCGFVQFVQRKNAEDALQGLNGS----TIGKQTVRLSWGRNP 258
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 84/184 (45%), Gaps = 23/184 (12%)
Query: 52 DPSTCRSVYVGNIHTQVTEPLLQEVFSST-GPVEGCKLIRKDKSS----YGFIHYFDRRS 106
D ++ S++VG++ + V + L E FS V+G K++ + YGF+ + D
Sbjct: 78 DIASDHSIFVGDLASDVNDTTLLETFSKRYSSVKGAKVVIDANTGRSKGYGFVRFGDDNE 137
Query: 107 AAMAILSLNGRHLFGQPIKVNWAY-----------ASGQREDTS-GHFNIFVGDLSPEVT 154
A+ +NG + +P+++ A S R D + +FVG L P V+
Sbjct: 138 KTHAMTEMNGVYCSTRPMRIGPATPRKTSGTSGPTGSAARSDGDLTNTTVFVGGLDPNVS 197
Query: 155 DATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIR 214
+ L FS Y S ++ ++ G FV F +++A+ A+ L G +G + +R
Sbjct: 198 EDDLRQTFSQYGEISSVKIPVGKQCG------FVQFVQRKNAEDALQGLNGSTIGKQTVR 251
Query: 215 CNWA 218
+W
Sbjct: 252 LSWG 255
>gi|395333502|gb|EJF65879.1| polyadenylate binding protein [Dichomitus squalens LYAD-421 SS1]
Length = 664
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 136/293 (46%), Gaps = 41/293 (13%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIR----KDKSSYGFIHYFDRRSAAMAILS 113
S+YVG + VTE +L E+F+ GPV ++ R + Y +++Y + A+
Sbjct: 45 SLYVGELDPTVTEAMLFEIFNMIGPVASIRVCRDAVTRRSLGYAYVNYLNAADGERALEQ 104
Query: 114 LNGRHLFGQPIKVNWAYASGQRE---DTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSD 170
LN + G+ ++ W+ QR+ +G NIF+ +L ++ + L F+ + +
Sbjct: 105 LNYSLIKGRACRIMWS----QRDPALRKTGQGNIFIKNLDEQIDNKALHDTFAAFGNVLS 160
Query: 171 ARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQS 230
+V D+ GRS+G+GFV + + A++AI + G L +++ ++ ++QS
Sbjct: 161 CKVATDEH-GRSKGYGFVHYETAEAAETAIKAVNGMLLNDKKVYVGHHISRKASSRERQS 219
Query: 231 SDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLG--- 287
+ E Q+T +YV NL PEVTQ D + F G
Sbjct: 220 -----------------------KLEEMKAQFTNIYVKNLDPEVTQDDFVKLFEQFGNVT 256
Query: 288 AGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSK 340
+ VI+ + +GFGFV + TH EA A++ T S G+++ S K
Sbjct: 257 SAVIQTDEQGQSRGFGFVNFETHEEAQKAVE---TLHDSEYHGRKLFVSRAQK 306
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 79/282 (28%), Positives = 132/282 (46%), Gaps = 38/282 (13%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKD---KSSYGFIHYFDRRSAAMAILSL 114
++++ N+ Q+ L + F++ G V CK+ + YGF+HY +A AI ++
Sbjct: 133 NIFIKNLDEQIDNKALHDTFAAFGNVLSCKVATDEHGRSKGYGFVHYETAEAAETAIKAV 192
Query: 115 NGRHLFGQPIKV----NWAYASGQR----EDTSGHF-NIFVGDLSPEVTDATLFACFSVY 165
NG L + + V + +S +R E+ F NI+V +L PEVT F +
Sbjct: 193 NGMLLNDKKVYVGHHISRKASSRERQSKLEEMKAQFTNIYVKNLDPEVTQDDFVKLFEQF 252
Query: 166 PSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNN 225
+ + A + D++ G+SRGFGFV+F ++AQ A+ L R++ + A K A
Sbjct: 253 GNVTSAVIQTDEQ-GQSRGFGFVNFETHEEAQKAVETLHDSEYHGRKLFVSRAQKKAERE 311
Query: 226 EDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHS 285
E+ + S ++ VE + Q +Y+ NL ++ L + F
Sbjct: 312 EELRKSYEQAKVEKMSKY-----------------QGVNLYIKNLEDDIDDERLRQEFEP 354
Query: 286 LGAGVIEEVRVQRD-----KGFGFVRYSTHAEAALAI-QMGN 321
G+ I +V RD KGFGFV +S+ EA A+ +M N
Sbjct: 355 FGS--ITSAKVMRDEKGTSKGFGFVCFSSPDEATKAVAEMNN 394
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 88/182 (48%), Gaps = 21/182 (11%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDK----SSYGFIHYFDRRSAAMAILS 113
++YV N+ +VT+ ++F G V +I+ D+ +GF+++ A A+ +
Sbjct: 230 NIYVKNLDPEVTQDDFVKLFEQFGNVTSA-VIQTDEQGQSRGFGFVNFETHEEAQKAVET 288
Query: 114 LNGRHLFGQPIKVNWAYASGQREDTSGH---------------FNIFVGDLSPEVTDATL 158
L+ G+ + V+ A +RE+ N+++ +L ++ D L
Sbjct: 289 LHDSEYHGRKLFVSRAQKKAEREEELRKSYEQAKVEKMSKYQGVNLYIKNLEDDIDDERL 348
Query: 159 FACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWA 218
F + S + A+VM D+K G S+GFGFV F + +A A+ ++ K +GS+ + + A
Sbjct: 349 RQEFEPFGSITSAKVMRDEK-GTSKGFGFVCFSSPDEATKAVAEMNNKMIGSKPLYVSLA 407
Query: 219 TK 220
+
Sbjct: 408 QR 409
>gi|407925486|gb|EKG18497.1| hypothetical protein MPH_04299 [Macrophomina phaseolina MS6]
Length = 311
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 83/269 (30%), Positives = 129/269 (47%), Gaps = 30/269 (11%)
Query: 89 IRKDKSSYGFIHYFDRRSAAMAILSLNGRHL--FGQPIKVNWAYASG---QREDTSGHFN 143
+ + + Y F+ F AA L+LNG+ + +P K+NWA G +R+D ++
Sbjct: 11 VCSNNAGYCFVD-FQTPEAAAKALTLNGQMIPNSNRPFKLNWASGGGLQDRRDDRGPEYS 69
Query: 144 IFVGDLSPEVTDATLFACF-SVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAIND 202
IFVGDL PEV + L + F YPSC A++M D +G SRG+GFV F ++ + Q A+N+
Sbjct: 70 IFVGDLGPEVNEYVLVSLFQGKYPSCKSAKIMSDPISGMSRGYGFVRFSDESEQQRALNE 129
Query: 203 LTGKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPE----- 257
+ G + G+R +R + AT ++K + AP
Sbjct: 130 MQGVYCGNRPMRISTATP-----KNKSGGGPGAGPMGGMHGGPGPVGMYGMGAPPLGYYG 184
Query: 258 --------NNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYST 309
+P TTV+VG L+ VT+ +L F G G I V++ KG GFV++
Sbjct: 185 APQPMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQ--GFGEITYVKIPPGKGCGFVQFVQ 242
Query: 310 HAEAALAIQMGNTTQSSYLFGKQMKCSWG 338
A +AI N Q + +++ SWG
Sbjct: 243 RHAAEMAI---NQMQGYPIGNSRVRLSWG 268
>gi|225680559|gb|EEH18843.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb03]
Length = 400
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 102/335 (30%), Positives = 159/335 (47%), Gaps = 34/335 (10%)
Query: 26 QSLYHPGLLAAPQIEPIPSGNLPPGFDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEG 85
QS P P SG+ G D T ++++G + + E ++ ++ G
Sbjct: 36 QSDPSPAPFQGPASGEAASGSAQQGGDAKT--TLWMGELEPWIDENFIRNLWFQMGEQVN 93
Query: 86 CKLIRKDKSS-----YGFIHYFDRRSAAMAILSLNGRHL--FGQPIKVNWAYASG----Q 134
K+IR DK S Y F+ F +AA L+L+G + + K+NWA G
Sbjct: 94 VKMIR-DKFSGSNAGYCFVD-FSSPAAAAKALTLSGTPIPNTSRTFKLNWASGGGLADRS 151
Query: 135 REDTSGHFNIFVGDLSPEVTDATLFACF-SVYPSCSDARVMWDQKTGRSRGFGFVSFRNQ 193
RE+ F+IFVGDL PEV + L + F S +PSC A++M D +G SRG+GFV F ++
Sbjct: 152 REERGPEFSIFVGDLGPEVNEYVLVSLFQSRFPSCKSAKIMTDPISGMSRGYGFVRFSDE 211
Query: 194 QDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSE-----DGK 248
D Q A+ ++ G + G+R +R + AT N+ + ++ G + G
Sbjct: 212 TDQQRALTEMQGVYCGNRPMRISTATP---KNKGPGAGPGGAMGMPGAGPAGMYPPMGGP 268
Query: 249 ETTNTEAPE-----NNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDKGFG 303
AP+ +P TTV+VG L+ VT+ +L F G G I V++ KG G
Sbjct: 269 PMGYYGAPQPMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQ--GFGEITYVKIPPGKGCG 326
Query: 304 FVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWG 338
FV++ A +AI N Q + +++ SWG
Sbjct: 327 FVQFVQRHAAEMAI---NQMQGYPIGNSRVRLSWG 358
>gi|320580282|gb|EFW94505.1| RNA binding protein [Ogataea parapolymorpha DL-1]
Length = 398
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 91/302 (30%), Positives = 144/302 (47%), Gaps = 29/302 (9%)
Query: 57 RSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDK---------SSYGFIHYFDRRSA 107
R++++G+I E + +V++ T K+I+ + S Y F+ F+
Sbjct: 28 RTLWMGDIEPWWNEEFITDVWAKTNKRVLVKVIKPRQNALVHQLAHSGYCFVE-FETPED 86
Query: 108 AMAILSLNGRHL---FGQPIKVNWAYASGQREDT--SGHFNIFVGDLSPEVTDATLFACF 162
A L LNG + + ++NWA A+ + +++FVGDLSP T+A L A F
Sbjct: 87 AKEALKLNGTIIPNTTDKLFRLNWASAATLNSQIAQTPEYSLFVGDLSPATTEAHLLALF 146
Query: 163 SV-YPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKG 221
+ + RVM D TG SR FGFV F + +D Q A+ ++ GKWL R IR AT
Sbjct: 147 QTHFSTVKTVRVMTDPATGLSRCFGFVRFSSDEDRQKALVEMNGKWLDGRLIRVALATP- 205
Query: 222 AGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQY-----TTVYVGNLAPEVTQ 276
++++Q + +EL + AP+ P Y TTV+VG L+ +T+
Sbjct: 206 --KHQNQQFRKHQIPMELDPYHAPGLPPIGYYAAPQPPPAYSDPTNTTVFVGGLSNNITE 263
Query: 277 LDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCS 336
L F G I V+V KG GFV+++ +A AI+ Q + G +++ S
Sbjct: 264 ATLLSIFEPYGQ--IVHVKVPPGKGCGFVKFTQRTDAERAIEQ---LQGYVIDGSRVRLS 318
Query: 337 WG 338
WG
Sbjct: 319 WG 320
>gi|402589265|gb|EJW83197.1| RNA recognition domain-containing protein, partial [Wuchereria
bancrofti]
Length = 231
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 73/203 (35%), Positives = 114/203 (56%), Gaps = 25/203 (12%)
Query: 137 DTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDA 196
DTS ++++FVGDLS EV + TL A F + S+A+V+ D +T +S+G+GFVSF +++A
Sbjct: 16 DTSKNYHVFVGDLSTEVNNCTLKAAFESFGEISEAKVIRDPQTLKSKGYGFVSFPVKENA 75
Query: 197 QSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKE--TTNTE 254
Q AI ++ G+ +G RQIR NWA V +G E+ + T +
Sbjct: 76 QKAIEEMNGQMIGRRQIRTNWA------------------VRRFDGGEENAMKPPTYDNI 117
Query: 255 APENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAA 314
+ T+VYVG ++P T +L + F ++ A VI EVR+ + +G+ FVRY AA
Sbjct: 118 FNATHAANTSVYVGGISPVTTDEELMQSFSAI-ATVI-EVRLFKQQGYAFVRYLNKDAAA 175
Query: 315 LAIQMGNTTQSSYLFGKQMKCSW 337
AI N + G++++CSW
Sbjct: 176 RAIMSMN---GKVINGQKIRCSW 195
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 93/198 (46%), Gaps = 26/198 (13%)
Query: 49 PGFDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKS----SYGFIHYFDR 104
P D S V+VG++ T+V L+ F S G + K+IR ++ YGF+ + +
Sbjct: 13 PKVDTSKNYHVFVGDLSTEVNNCTLKAAFESFGEISEAKVIRDPQTLKSKGYGFVSFPVK 72
Query: 105 RSAAMAILSLNGRHLFGQPIKVNWAYA--SGQREDT--------------SGHFNIFVGD 148
+A AI +NG+ + + I+ NWA G E+ + + +++VG
Sbjct: 73 ENAQKAIEEMNGQMIGRRQIRTNWAVRRFDGGEENAMKPPTYDNIFNATHAANTSVYVGG 132
Query: 149 LSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWL 208
+SP TD L FS + + R+ Q G+ FV + N+ A AI + GK +
Sbjct: 133 ISPVTTDEELMQSFSAIATVIEVRLFKQQ------GYAFVRYLNKDAAARAIMSMNGKVI 186
Query: 209 GSRQIRCNWATKGAGNNE 226
++IRC+W+ NN+
Sbjct: 187 NGQKIRCSWSRTAMDNND 204
>gi|413919586|gb|AFW59518.1| hypothetical protein ZEAMMB73_768040 [Zea mays]
Length = 329
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 83/263 (31%), Positives = 136/263 (51%), Gaps = 28/263 (10%)
Query: 56 CRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS-----YGFIHYFDRRSAAMA 110
R++++G++ + + + FS+TG V+ KLIR DK+S YGF+ + R +A
Sbjct: 85 VRTLWIGDLQYWMDDNYVFGCFSNTGEVQNVKLIR-DKNSGQLQGYGFVEFTSRAAAERV 143
Query: 111 ILSLNGRHL--FGQPIKVNWAYASGQREDTSGHFNIFVGDLSPEVTDATLFACFSV-YPS 167
+ + NG+ + ++NWA A +R+DT + IFVGDL+ +VTD L F V YPS
Sbjct: 144 LQTYNGQMMPNVDLTFRLNWASAGEKRDDTP-DYTIFVGDLAADVTDYLLQETFRVHYPS 202
Query: 168 CSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNED 227
A+V+ D+ T R++G+GFV F + + A+ ++ G SR +R A
Sbjct: 203 VKGAKVVTDKLTMRTKGYGFVKFGDPTEQARAMTEMNGMPCSSRPMRIGPAAS------- 255
Query: 228 KQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLG 287
+A VV+ +S+ + EN+P TT++VG L P VT+ L + F G
Sbjct: 256 --RKNAGGVVQERVPNSQGAQS-------ENDPNNTTIFVGGLDPNVTEDVLKQAFSPYG 306
Query: 288 AGVIEEVRVQRDKGFGFVRYSTH 310
+ V++ K GFV++ T
Sbjct: 307 E--VIHVKIPVGKRCGFVQFVTR 327
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 84/181 (46%), Gaps = 40/181 (22%)
Query: 144 IFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDL 203
+++GDL + D +F CFS + +++ D+ +G+ +G+GFV F ++ A+ +
Sbjct: 88 LWIGDLQYWMDDNYVFGCFSNTGEVQNVKLIRDKNSGQLQGYGFVEFTSRAAAERVLQTY 147
Query: 204 TGKWLGSRQI--RCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQ 261
G+ + + + R NWA+ G E ++ P
Sbjct: 148 NGQMMPNVDLTFRLNWASAG--------------------------------EKRDDTPD 175
Query: 262 YTTVYVGNLAPEVTQLDLHR----HFHSL-GAGVIEEVRVQRDKGFGFVRYSTHAEAALA 316
YT ++VG+LA +VT L H+ S+ GA V+ + R KG+GFV++ E A A
Sbjct: 176 YT-IFVGDLAADVTDYLLQETFRVHYPSVKGAKVVTDKLTMRTKGYGFVKFGDPTEQARA 234
Query: 317 I 317
+
Sbjct: 235 M 235
>gi|226292803|gb|EEH48223.1| mRNA binding post-transcriptional regulator (Csx1)
[Paracoccidioides brasiliensis Pb18]
Length = 400
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 99/334 (29%), Positives = 157/334 (47%), Gaps = 32/334 (9%)
Query: 26 QSLYHPGLLAAPQIEPIPSGNLPPGFDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEG 85
QS P P SG+ G D T ++++G + + E ++ ++ G
Sbjct: 36 QSDPSPAPFQGPASGEAASGSAQQGGDAKT--TLWMGELEPWIDENFIRNLWFQMGEQVN 93
Query: 86 CKLIRK----DKSSYGFIHYFDRRSAAMAILSLNGRHL--FGQPIKVNWAYASG----QR 135
K+IR + Y F+ F +AA L+L+G + + K+NWA G R
Sbjct: 94 VKMIRDKFSGSNAGYCFVD-FSSPAAAAKALTLSGTPIPNTSRTFKLNWASGGGLADRSR 152
Query: 136 EDTSGHFNIFVGDLSPEVTDATLFACF-SVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQ 194
E+ F+IFVGDL PEV + L + F S +PSC A++M D +G SRG+GFV F ++
Sbjct: 153 EERGPEFSIFVGDLGPEVNEYVLVSLFQSRFPSCKSAKIMTDPISGMSRGYGFVRFSDET 212
Query: 195 DAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSE-----DGKE 249
D Q A+ ++ G + G+R +R + AT N+ + ++ G + G
Sbjct: 213 DQQRALTEMQGVYCGNRPMRISTATP---KNKGPGAGPGGAMGMPGAGPAGMYPPMGGPP 269
Query: 250 TTNTEAPE-----NNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDKGFGF 304
AP+ +P TTV+VG L+ VT+ +L F G G I V++ KG GF
Sbjct: 270 MGYYGAPQPMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQ--GFGEITYVKIPPGKGCGF 327
Query: 305 VRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWG 338
V++ A +AI N Q + +++ SWG
Sbjct: 328 VQFVQRHAAEMAI---NQMQGYPIGNSRVRLSWG 358
>gi|392595814|gb|EIW85137.1| polyadenylate binding protein [Coniophora puteana RWD-64-598 SS2]
Length = 683
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 84/312 (26%), Positives = 142/312 (45%), Gaps = 47/312 (15%)
Query: 41 PIPSGNLPPGFDPSTC--RSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIR----KDKS 94
P PS NLPP S+ S+YVG + VTE ++ E+F+ GPV ++ R +
Sbjct: 27 PTPSYNLPPQTSISSAPSASLYVGELDPTVTEAMIFEIFNMIGPVASIRVCRDAVTRRSL 86
Query: 95 SYGFIHYFDRRSAAMAILSLNGRHLFGQPIKVNWAYASGQREDT---SGHFNIFVGDLSP 151
Y +++Y + A+ LN + G+P ++ W+ QR+ +G NIF+ +L
Sbjct: 87 GYAYVNYLNTADGERALEQLNYSLIKGRPCRIMWS----QRDPALRKTGQGNIFIKNLDE 142
Query: 152 EVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSR 211
++ + L F + + +V D++ GRS+G+GFV + + A++AI + G L +
Sbjct: 143 QIDNKALHDTFVAFGNVLSCKVATDEQ-GRSKGYGFVHYETAEAAETAIKAVNGMLLNDK 201
Query: 212 QIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLA 271
++ + E + D E Q+T +Y+ NL
Sbjct: 202 KV---YVGPHIPRKERQSKLD------------------------EMKAQFTNLYIKNLD 234
Query: 272 PEVTQLDLHRHFHSLGAGVIEEVRVQ---RDKGFGFVRYSTHAEAALAIQMGNTTQSSYL 328
EVTQ + F+ G+ V+V R KGFGFV Y +H EA A+ + + L
Sbjct: 235 TEVTQEEFEELFNRYGSVTSAIVQVDDEGRSKGFGFVNYESHEEAQAAV---DNLHDTDL 291
Query: 329 FGKQMKCSWGSK 340
GK++ + K
Sbjct: 292 KGKKLYVTRAQK 303
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 129/278 (46%), Gaps = 34/278 (12%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDK---SSYGFIHYFDRRSAAMAILSL 114
++++ N+ Q+ L + F + G V CK+ ++ YGF+HY +A AI ++
Sbjct: 134 NIFIKNLDEQIDNKALHDTFVAFGNVLSCKVATDEQGRSKGYGFVHYETAEAAETAIKAV 193
Query: 115 NGRHLFGQPIKVNWAYASGQR----EDTSGHF-NIFVGDLSPEVTDATLFACFSVYPSCS 169
NG L + + V +R ++ F N+++ +L EVT F+ Y S +
Sbjct: 194 NGMLLNDKKVYVGPHIPRKERQSKLDEMKAQFTNLYIKNLDTEVTQEEFEELFNRYGSVT 253
Query: 170 DARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQ 229
A V D + GRS+GFGFV++ + ++AQ+A+++L L +++ A K A E+ +
Sbjct: 254 SAIVQVDDE-GRSKGFGFVNYESHEEAQAAVDNLHDTDLKGKKLYVTRAQKKAEREEELR 312
Query: 230 SSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAG 289
S ++ +E + Q +YV NL +V L F G
Sbjct: 313 RSYEQAKMEKLSKY-----------------QGVNLYVKNLEDDVDDDKLRAEFEPF--G 353
Query: 290 VIEEVRVQRD-----KGFGFVRYSTHAEAALAI-QMGN 321
I +V D KGFGFV +S+ EA AI +M N
Sbjct: 354 TITSCKVMSDEKGSSKGFGFVCFSSPDEATKAIAEMNN 391
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 89/181 (49%), Gaps = 19/181 (10%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDK---SSYGFIHYFDRRSAAMAILSL 114
++Y+ N+ T+VT+ +E+F+ G V + D+ +GF++Y A A+ +L
Sbjct: 227 NLYIKNLDTEVTQEEFEELFNRYGSVTSAIVQVDDEGRSKGFGFVNYESHEEAQAAVDNL 286
Query: 115 NGRHLFGQPIKVNWAYASGQREDTSGH---------------FNIFVGDLSPEVTDATLF 159
+ L G+ + V A +RE+ N++V +L +V D L
Sbjct: 287 HDTDLKGKKLYVTRAQKKAEREEELRRSYEQAKMEKLSKYQGVNLYVKNLEDDVDDDKLR 346
Query: 160 ACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT 219
A F + + + +VM D+K G S+GFGFV F + +A AI ++ K +GS+ + + A
Sbjct: 347 AEFEPFGTITSCKVMSDEK-GSSKGFGFVCFSSPDEATKAIAEMNNKMIGSKPLYVSLAQ 405
Query: 220 K 220
+
Sbjct: 406 R 406
>gi|295661580|ref|XP_002791345.1| mRNA binding post-transcriptional regulator (Csx1)
[Paracoccidioides sp. 'lutzii' Pb01]
gi|226280907|gb|EEH36473.1| mRNA binding post-transcriptional regulator (Csx1)
[Paracoccidioides sp. 'lutzii' Pb01]
Length = 400
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 102/335 (30%), Positives = 159/335 (47%), Gaps = 34/335 (10%)
Query: 26 QSLYHPGLLAAPQIEPIPSGNLPPGFDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEG 85
QS P P SG+ G D T ++++G + + E ++ ++ G
Sbjct: 36 QSDPSPAPFQGPASGEAASGSAQQGGDAKT--TLWMGELEPWIDENFIRNLWFQMGEQVN 93
Query: 86 CKLIRKDKSS-----YGFIHYFDRRSAAMAILSLNGRHL--FGQPIKVNWAYASG----Q 134
K+IR DK S Y F+ F +AA L+L+G + + K+NWA G
Sbjct: 94 VKMIR-DKFSGSNAGYCFVD-FSSPAAAAKALTLSGTPIPNTSRTFKLNWASGGGLADRS 151
Query: 135 REDTSGHFNIFVGDLSPEVTDATLFACF-SVYPSCSDARVMWDQKTGRSRGFGFVSFRNQ 193
RE+ F+IFVGDL PEV + L + F S +PSC A++M D +G SRG+GFV F ++
Sbjct: 152 REERGPEFSIFVGDLGPEVNEYVLVSLFQSRFPSCKSAKIMTDPISGMSRGYGFVRFSDE 211
Query: 194 QDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSED-----GK 248
D Q A+ ++ G + G+R +R + AT N+ + ++ G + G
Sbjct: 212 TDQQRALTEMQGVYCGNRPMRISTATP---KNKGPGAGPGGAMGMPGAGPAGMYPPMGGP 268
Query: 249 ETTNTEAPE-----NNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDKGFG 303
AP+ +P TTV+VG L+ VT+ +L F G G I V++ KG G
Sbjct: 269 PMGYYGAPQPMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQ--GFGEITYVKIPPGKGCG 326
Query: 304 FVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWG 338
FV++ A +AI N Q + +++ SWG
Sbjct: 327 FVQFVQRHAAEMAI---NQMQGYPIGNSRVRLSWG 358
>gi|410079368|ref|XP_003957265.1| hypothetical protein KAFR_0D04830 [Kazachstania africana CBS 2517]
gi|372463850|emb|CCF58130.1| hypothetical protein KAFR_0D04830 [Kazachstania africana CBS 2517]
Length = 406
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 97/322 (30%), Positives = 154/322 (47%), Gaps = 56/322 (17%)
Query: 40 EPIPSGNLPPGFDPSTCRSVYVGNIHTQVTEPLLQEVFSSTG-PVEGCKLIRKDKSSYGF 98
P+P GN+ +Y+G++ E ++ ++++S G P K++ + Y F
Sbjct: 26 NPVPKGNV-----------LYMGDLDLSWDERVVSQIWASLGEPNVSVKMMNR----YCF 70
Query: 99 IHYFDRRSAAMAILSLNGRHL---FGQPIKVNWAYASGQREDTSGHFNIFVGDLSPEVTD 155
I + D +A+ A+L NG + G+ +K+NWA AS + S ++IFVGDLSP VT+
Sbjct: 71 ITFLDSLTASNALLK-NGMLIPGYGGKRLKLNWAQAS---SNASNGYSIFVGDLSPNVTE 126
Query: 156 ATLFACF-SVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIR 214
A LF F + Y S A++++DQ TG SRG+GFV F + D Q A+ ++ G +L R I+
Sbjct: 127 AQLFDLFINKYASTDHAKIVYDQATGVSRGYGFVRFNSLMDQQHALLEMQGIFLNGRAIK 186
Query: 215 CNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPEN---------------- 258
G N+ Q + + +D K + P N
Sbjct: 187 I-----GMTGNKQGQLQGQQHQGQ----QQQDFKVPIQSNTPMNQSQFMYPVQQQPTLNH 237
Query: 259 --NPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALA 316
+P TTV+VG L+ VT+ +L +F G I V++ KG GFV+Y A A
Sbjct: 238 FTDPNNTTVFVGGLSSLVTEDELREYFKPFGT--IVYVKIPVGKGCGFVQYIDRVSAENA 295
Query: 317 IQMGNTTQSSYLFGKQMKCSWG 338
I Q + +++ SWG
Sbjct: 296 IS---KMQGFPIANSRIRLSWG 314
>gi|367019444|ref|XP_003659007.1| hypothetical protein MYCTH_2087998 [Myceliophthora thermophila ATCC
42464]
gi|347006274|gb|AEO53762.1| hypothetical protein MYCTH_2087998 [Myceliophthora thermophila ATCC
42464]
Length = 396
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 95/306 (31%), Positives = 149/306 (48%), Gaps = 30/306 (9%)
Query: 57 RSVYVGNIHTQVTEPLLQEVFSST-GPVEGCKLIRKDKSS---YGFIHYFDRRSAAMAIL 112
+++++G + + E ++ VF + K+IR S Y FI F AA L
Sbjct: 40 KTLWMGEMEGWMDENFIKNVFQTVLAENVQVKVIRDRHSGNAGYCFIE-FGTPEAAQKAL 98
Query: 113 SLNGRHLFG--QPIKVNWAYASG---QREDTSGHFNIFVGDLSPEVTDATLFACF-SVYP 166
SLNG + + K+NWA G +R+D ++IFVGDL PEV + L + F S +P
Sbjct: 99 SLNGTPVPNSTRVFKLNWASGGGLVDRRDDRGPEYSIFVGDLGPEVNEFVLVSLFQSRFP 158
Query: 167 SCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNE 226
SC A++M D TG+SRG+GFV F ++ D Q A+ ++ G + G+R +R + AT +++
Sbjct: 159 SCKSAKIMTDAMTGQSRGYGFVRFSDEADQQRALVEMQGVYCGNRPMRISTATPKTRSHQ 218
Query: 227 --DKQSSDAKSVVELTNG---------SSEDGKETTNTEAPEN---NPQYTTVYVGNLAP 272
A ++ G + N P N +P TTV+VG L+
Sbjct: 219 YGGAHGQGANPMIPPVPGHPGPMWGAPAYYGQGAAFNPMQPMNQFTDPNNTTVFVGGLSG 278
Query: 273 EVTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQ 332
VT+ +L F G G I V++ KG GFV++ A +AI N Q + +
Sbjct: 279 YVTEDELRSFFQ--GFGEITYVKIPPGKGCGFVQFVHRHAAEMAI---NQMQGYPIGNSR 333
Query: 333 MKCSWG 338
++ SWG
Sbjct: 334 VRLSWG 339
Score = 45.1 bits (105), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 87/204 (42%), Gaps = 52/204 (25%)
Query: 172 RVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWL--GSRQIRCNWATKGAGNNEDKQ 229
+V+ D+ +G + G+ F+ F + AQ A++ L G + +R + NWA+ G
Sbjct: 71 KVIRDRHSGNA-GYCFIEFGTPEAAQKALS-LNGTPVPNSTRVFKLNWASGGG------- 121
Query: 230 SSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSL--- 286
L + + G P+Y+ ++VG+L PEV + L F S
Sbjct: 122 ---------LVDRRDDRG------------PEYS-IFVGDLGPEVNEFVLVSLFQSRFPS 159
Query: 287 --GAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSKPTPP 344
A ++ + + +G+GFVR+S A+ A+ Q Y + M+ S + T
Sbjct: 160 CKSAKIMTDAMTGQSRGYGFVRFSDEADQQRALV---EMQGVYCGNRPMRISTATPKTRS 216
Query: 345 -------GTSSNPLPPPAAAPIPG 361
G +NP+ P P+PG
Sbjct: 217 HQYGGAHGQGANPMIP----PVPG 236
>gi|45872602|gb|AAH68194.1| Tial1 protein [Mus musculus]
Length = 269
Score = 117 bits (294), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 71/189 (37%), Positives = 105/189 (55%), Gaps = 18/189 (9%)
Query: 152 EVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSR 211
E+T + + F+ + SDARV+ D TG+S+G+GFVSF N+ DA++AI + G+WLG R
Sbjct: 1 EITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGR 60
Query: 212 QIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLA 271
QIR NWAT+ + Q ++ K + ++ N +P+N TVY G +A
Sbjct: 61 QIRTNWATRKPPAPKSTQETNTKQL---------RFEDVVNQSSPKN----CTVYCGGIA 107
Query: 272 PEVTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGK 331
+T + + F G I E+RV +KG+ FVR+STH AA AI N T + G
Sbjct: 108 SGLTDQLMRQTFSPFGQ--IMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTT---IEGH 162
Query: 332 QMKCSWGSK 340
+KC WG +
Sbjct: 163 VVKCYWGKE 171
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/189 (20%), Positives = 78/189 (41%), Gaps = 29/189 (15%)
Query: 67 QVTEPLLQEVFSSTGPVEGCKLIRK----DKSSYGFIHYFDRRSAAMAILSLNGRHLFGQ 122
++T ++ F+ G + ++++ YGF+ ++++ A AI+ + G+ L G+
Sbjct: 1 EITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGR 60
Query: 123 PIKVNWAY------ASGQREDTS-------------GHFNIFVGDLSPEVTDATLFACFS 163
I+ NWA S Q +T + ++ G ++ +TD + FS
Sbjct: 61 QIRTNWATRKPPAPKSTQETNTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQTFS 120
Query: 164 VYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAG 223
+ + RV +G+ FV F + A AI + G + ++C W +
Sbjct: 121 PFGQIMEIRVF------PEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGKESPD 174
Query: 224 NNEDKQSSD 232
++ Q D
Sbjct: 175 MTKNFQQVD 183
>gi|398412748|ref|XP_003857692.1| hypothetical protein MYCGRDRAFT_65137 [Zymoseptoria tritici IPO323]
gi|339477577|gb|EGP92668.1| hypothetical protein MYCGRDRAFT_65137 [Zymoseptoria tritici IPO323]
Length = 437
Score = 117 bits (293), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 93/313 (29%), Positives = 144/313 (46%), Gaps = 38/313 (12%)
Query: 45 GNLPPGFDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSSYGFIHYFDR 104
G L P D + RSV+ G + QV ++++ FS + + Y F+ F+
Sbjct: 77 GELEPWIDENFVRSVWFG-MGYQVNVKMIRDKFSGS------------NAGYCFVD-FEN 122
Query: 105 RSAAMAILSLNGRHL--FGQPIKVNWAYASG----QREDTSGHFNIFVGDLSPEVTDATL 158
A L LNG+ + + K+NWA G R+D F+IFVGDL PEV + L
Sbjct: 123 PDQATRALQLNGQVIPNSNRQFKLNWASGGGLADRSRDDRGPEFSIFVGDLGPEVNEYVL 182
Query: 159 FACF-SVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNW 217
+ F Y SC A++M D +G SRG+GFV F ++QD Q A++++ G + G+R +R +
Sbjct: 183 MSLFQGKYTSCKSAKIMSDPISGMSRGYGFVRFADEQDQQKALHEMQGVYCGNRPMRIST 242
Query: 218 ATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPE------------NNPQYTTV 265
AT + G + + + P +P TTV
Sbjct: 243 ATPKNKSGAGGPGGMPGMGPPGGPGGNPNMGMYSMGAPPMGYYGAPQPMNQFTDPNNTTV 302
Query: 266 YVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQS 325
+VG L+ VT+ +L F G G I V++ KG GFV++ A +AI N Q
Sbjct: 303 FVGGLSGYVTEDELRSFFQ--GFGEITYVKIPPGKGCGFVQFVQRHAAEMAI---NQMQG 357
Query: 326 SYLFGKQMKCSWG 338
+ +++ SWG
Sbjct: 358 YPIGNSRVRLSWG 370
>gi|330935675|ref|XP_003305076.1| hypothetical protein PTT_17823 [Pyrenophora teres f. teres 0-1]
gi|311318022|gb|EFQ86789.1| hypothetical protein PTT_17823 [Pyrenophora teres f. teres 0-1]
Length = 471
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 91/302 (30%), Positives = 143/302 (47%), Gaps = 29/302 (9%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRK----DKSSYGFIHYFDRRSAAMAILS 113
++++G + + E ++ ++ + G K+IR + Y F+ + +AA A L
Sbjct: 66 TLWMGELEPWIDENFVRSIWYNMGETVNVKMIRDKFSGSNAGYCFVDFASPDAAAKA-LG 124
Query: 114 LNGRHL--FGQPIKVNWAYASG--QREDTSGHFNIFVGDLSPEVTDATLFACF-SVYPSC 168
LNG + +P K+NWA G R F++FVGDL PEVT+ L F + Y S
Sbjct: 125 LNGSLIPNSNRPFKLNWASGGGLADRRQRGPEFSVFVGDLGPEVTEFVLVQLFQNKYAST 184
Query: 169 SDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDK 228
A++M D +G SRG+GFV F ++ D Q A+ ++ G + G+R +R + AT N
Sbjct: 185 KSAKIMSDPISGMSRGYGFVRFASEDDQQKALTEMQGVYCGNRPMRISTAT--PKNKSGG 242
Query: 229 QSSDAKSVVELTNGSSEDGKETTN---------TEAPEN---NPQYTTVYVGNLAPEVTQ 276
+ G G + N T P N +P TTV+VG L+ VT+
Sbjct: 243 PGGPGGMGMPQGGGGPGMGMYSMNAPPMGGYYGTPQPMNQFTDPNNTTVFVGGLSGYVTE 302
Query: 277 LDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCS 336
+L F G G I V++ KG GFV++ A +AI N Q + +++ S
Sbjct: 303 DELRSFFQ--GFGEITYVKIPPGKGCGFVQFVQRHAAEMAI---NQMQGYPIGNSRVRLS 357
Query: 337 WG 338
WG
Sbjct: 358 WG 359
>gi|225562584|gb|EEH10863.1| RNA-binding protein [Ajellomyces capsulatus G186AR]
Length = 427
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 94/308 (30%), Positives = 146/308 (47%), Gaps = 20/308 (6%)
Query: 45 GNLPPGFDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSSYGFIHY-FD 103
G L P D + R+++ + QV ++++ FS I +S+ G+ F
Sbjct: 70 GELEPWIDENFIRNLWF-QMGEQVNVKMIRDKFSGKQHESSRSNIDIPRSNAGYCFVDFT 128
Query: 104 RRSAAMAILSLNGRHL--FGQPIKVNWAYASG----QREDTSGHFNIFVGDLSPEVTDAT 157
+AA L+L+G + + K+NWA G RE+ F+IFVGDL PEV +
Sbjct: 129 TPAAAAKALTLSGTPIPNTSRTFKLNWASGGGLADRSREERGPEFSIFVGDLGPEVNEYV 188
Query: 158 LFACF-SVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCN 216
L + F S +PSC A++M D +G SRG+GFV F ++ D Q A+ ++ G + G+R +R +
Sbjct: 189 LVSLFQSRFPSCKSAKIMTDPISGMSRGYGFVRFSDETDQQRALTEMQGVYCGNRPMRIS 248
Query: 217 WAT-KGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPE-----NNPQYTTVYVGNL 270
AT K G + G AP+ +P TTV+VG L
Sbjct: 249 TATPKNKGAGAGPGAMGMPGAGPAGMFPPMGGPPMGYYGAPQPMNQFTDPNNTTVFVGGL 308
Query: 271 APEVTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFG 330
+ VT+ +L F G G I V++ KG GFV++ A +AI N Q +
Sbjct: 309 SGYVTEDELRSFFQ--GFGEITYVKIPPGKGCGFVQFVQRHAAEMAI---NQMQGYPIGN 363
Query: 331 KQMKCSWG 338
+++ SWG
Sbjct: 364 SRVRLSWG 371
>gi|225430808|ref|XP_002271291.1| PREDICTED: splicing factor 3B subunit 4 [Vitis vinifera]
Length = 373
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 70/200 (35%), Positives = 110/200 (55%), Gaps = 10/200 (5%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS-----YGFIHYFDRRSAAMAIL 112
+ YVGN+ QVTE LL E+F GPV + KD+ + YGF+ + A AI
Sbjct: 26 TAYVGNLDPQVTEELLWELFVQAGPVVNV-YVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
Query: 113 SLNGRHLFGQPIKVNWAYASGQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPS-CSDA 171
LN L+G+PI+VN A + D N+FVG+L P+V + L+ FS + ++
Sbjct: 85 VLNMIKLYGKPIRVNKASQDKKSLDVGA--NLFVGNLDPDVDEKLLYDTFSAFGVIVTNP 142
Query: 172 RVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSS 231
++M D TG SRGFGFVS+ + + + +AI + G++L +RQI ++A K E + +
Sbjct: 143 KIMRDPDTGNSRGFGFVSYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGE-RHGT 201
Query: 232 DAKSVVELTNGSSEDGKETT 251
A+ V+ +N S+ + T
Sbjct: 202 PAERVLAASNPSAPKSRPHT 221
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 90/202 (44%), Gaps = 44/202 (21%)
Query: 145 FVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLT 204
+VG+L P+VT+ L+ F + V D+ T +G+GFV FR+++DA AI L
Sbjct: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
Query: 205 GKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTT 264
L + IR N A+ +DK+S D +
Sbjct: 88 MIKLYGKPIRVNKAS------QDKKSLDVGA----------------------------N 113
Query: 265 VYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRD------KGFGFVRYSTHAEAALAIQ 318
++VGNL P+V + L+ F + G ++ ++ RD +GFGFV Y + + AI+
Sbjct: 114 LFVGNLDPDVDEKLLYDTFSAFGV-IVTNPKIMRDPDTGNSRGFGFVSYDSFEASDAAIE 172
Query: 319 MGNTTQSSYLFGKQMKCSWGSK 340
N YL +Q+ S+ K
Sbjct: 173 AMN---GQYLCNRQITVSYAYK 191
Score = 44.7 bits (104), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 47/86 (54%), Gaps = 11/86 (12%)
Query: 261 QYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDK------GFGFVRYSTHAEAA 314
Q T YVGNL P+VT+ L F + AG + V V +D+ G+GFV + + +A
Sbjct: 23 QDATAYVGNLDPQVTEELLWELF--VQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDAD 80
Query: 315 LAIQMGNTTQSSYLFGKQMKCSWGSK 340
AI++ N + L+GK ++ + S+
Sbjct: 81 YAIKVLNMIK---LYGKPIRVNKASQ 103
>gi|354484923|ref|XP_003504635.1| PREDICTED: polyadenylate-binding protein 1-like [Cricetulus
griseus]
Length = 672
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 85/285 (29%), Positives = 138/285 (48%), Gaps = 43/285 (15%)
Query: 47 LPPGFDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIR----KDKSSYGFIHYF 102
+ PG S+YVG++H VTE +L E+FS G + ++ R + Y +I++
Sbjct: 64 MDPGGQACALSSLYVGDLHPDVTEAMLYEMFSPIGTILSIRVCRDVATRRSLGYAYINFQ 123
Query: 103 DRRSAAMAILSLNGRHLFGQPIKVNWAYAS-GQREDTSGHFNIFVGDLSPEVTDATLFAC 161
A A+ ++N + GQPI++ W++ G R+ SG NIF+ +L + + L+
Sbjct: 124 QPADAERALDTMNFEMIKGQPIRIMWSHRDPGLRK--SGMGNIFIKNLENSIDNKALYDT 181
Query: 162 FSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKG 221
FS + S ++V++++ SRGFGFV F + AQ AIN + G L R++
Sbjct: 182 FSTFGSILSSKVVYNEHG--SRGFGFVHFETHEAAQKAINTMNGMLLNDRKVFV------ 233
Query: 222 AGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHR 281
G+ + +Q +A EL G+ G +T VYV NL ++ + L
Sbjct: 234 -GHFKSRQKREA----EL--GARALG--------------FTNVYVKNLHMDMDEQGLQD 272
Query: 282 HFHSLGAGVIEEVRVQRD-----KGFGFVRYSTHAEAALAIQMGN 321
F G ++ V+V RD +GFGFV + H EA A+ N
Sbjct: 273 LFSQFGK--MQSVKVMRDSNGQSRGFGFVNFEKHEEAQKAVDHMN 315
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/280 (26%), Positives = 125/280 (44%), Gaps = 31/280 (11%)
Query: 49 PGFDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRRS 106
PG S ++++ N+ + L + FS+ G + K++ + S +GF+H+ +
Sbjct: 154 PGLRKSGMGNIFIKNLENSIDNKALYDTFSTFGSILSSKVVYNEHGSRGFGFVHFETHEA 213
Query: 107 AAMAILSLNGRHLFGQPIKVNWAYASGQRE-----DTSGHFNIFVGDLSPEVTDATLFAC 161
A AI ++NG L + + V + +RE G N++V +L ++ + L
Sbjct: 214 AQKAINTMNGMLLNDRKVFVGHFKSRQKREAELGARALGFTNVYVKNLHMDMDEQGLQDL 273
Query: 162 FSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKG 221
FS + +VM D G+SRGFGFV+F ++AQ A++ + GK ++R G
Sbjct: 274 FSQFGKMQSVKVMRD-SNGQSRGFGFVNFEKHEEAQKAVDHMNGK-----EVRGQLLYVG 327
Query: 222 AGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHR 281
++ S+ K E + +N Q +YV NL + L
Sbjct: 328 RAQKRAERQSELKRRFEQVK------------QERQNRYQGVNLYVKNLDDSINDERLKE 375
Query: 282 HFHSLGAGVIEEVRVQRD----KGFGFVRYSTHAEAALAI 317
F + GVI +V + KGFGFV +S+ EA A+
Sbjct: 376 VFSAY--GVITSAKVMTESSHSKGFGFVCFSSPEEATKAV 413
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 88/181 (48%), Gaps = 20/181 (11%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDK---SSYGFIHYFDRRSAAMAILSL 114
+VYV N+H + E LQ++FS G ++ K++R +GF+++ A A+ +
Sbjct: 255 NVYVKNLHMDMDEQGLQDLFSQFGKMQSVKVMRDSNGQSRGFGFVNFEKHEEAQKAVDHM 314
Query: 115 NGRHLFGQPIKVNWAYASGQREDTSGH---------------FNIFVGDLSPEVTDATLF 159
NG+ + GQ + V A +R+ N++V +L + D L
Sbjct: 315 NGKEVRGQLLYVGRAQKRAERQSELKRRFEQVKQERQNRYQGVNLYVKNLDDSINDERLK 374
Query: 160 ACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT 219
FS Y + A+VM + + S+GFGFV F + ++A A+ ++ G+ +G++ + A
Sbjct: 375 EVFSAYGVITSAKVMTE--SSHSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQ 432
Query: 220 K 220
+
Sbjct: 433 R 433
Score = 42.0 bits (97), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 43/81 (53%), Gaps = 2/81 (2%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRRSAAMAILSLN 115
++YV N+ + + L+EVFS+ G + K++ + S +GF+ + A A+ +N
Sbjct: 358 NLYVKNLDDSINDERLKEVFSAYGVITSAKVMTESSHSKGFGFVCFSSPEEATKAVTEMN 417
Query: 116 GRHLFGQPIKVNWAYASGQRE 136
GR + +P+ V A +R+
Sbjct: 418 GRIVGTKPLYVALAQRKEERK 438
>gi|356544204|ref|XP_003540544.1| PREDICTED: splicing factor 3B subunit 4-like [Glycine max]
Length = 364
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 66/200 (33%), Positives = 111/200 (55%), Gaps = 10/200 (5%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS-----YGFIHYFDRRSAAMAIL 112
+ YVGN+ Q+ E LL E+F GPV + KD+ + YGF+ + A AI
Sbjct: 26 TAYVGNLDPQICEELLWELFVQAGPVVNV-YVPKDRVTNQHQGYGFVEFRSEEDADYAIK 84
Query: 113 SLNGRHLFGQPIKVNWAYASGQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPS-CSDA 171
LN L+G+PI+VN A + D N+F+G+L P+V + L+ FS + ++
Sbjct: 85 VLNMIKLYGKPIRVNKASQDKKSLDVGA--NLFIGNLDPDVDEKLLYDTFSAFGVIVTNP 142
Query: 172 RVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSS 231
++M D +TG SRGFGF+S+ + + + SAI + G++L +RQI ++A K E + +
Sbjct: 143 KIMRDPETGNSRGFGFISYDSFEASDSAIEAMNGQYLCNRQITVSYAYKKDTKGE-RHGT 201
Query: 232 DAKSVVELTNGSSEDGKETT 251
A+ V+ +N +++ + T
Sbjct: 202 PAERVLAASNPTTQKSRPHT 221
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 102/231 (44%), Gaps = 55/231 (23%)
Query: 116 GRHLFGQPIKVNWAYASGQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMW 175
G +L GQ +A+ + +D + +VG+L P++ + L+ F + V
Sbjct: 10 GANLLGQ-------HAAERNQDATA----YVGNLDPQICEELLWELFVQAGPVVNVYVPK 58
Query: 176 DQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSSDAKS 235
D+ T + +G+GFV FR+++DA AI L L + IR N A+ +DK+S D +
Sbjct: 59 DRVTNQHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKAS------QDKKSLDVGA 112
Query: 236 VVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVR 295
+++GNL P+V + L+ F + G ++ +
Sbjct: 113 ----------------------------NLFIGNLDPDVDEKLLYDTFSAFGV-IVTNPK 143
Query: 296 VQRD------KGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSK 340
+ RD +GFGF+ Y + + AI+ N YL +Q+ S+ K
Sbjct: 144 IMRDPETGNSRGFGFISYDSFEASDSAIEAMN---GQYLCNRQITVSYAYK 191
>gi|302760919|ref|XP_002963882.1| hypothetical protein SELMODRAFT_80061 [Selaginella moellendorffii]
gi|300169150|gb|EFJ35753.1| hypothetical protein SELMODRAFT_80061 [Selaginella moellendorffii]
Length = 332
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 86/292 (29%), Positives = 142/292 (48%), Gaps = 22/292 (7%)
Query: 57 RSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS----YGFIHYFDRRSAAMAIL 112
RS+++G++ + E L+ F + V K+IR + YGF+ + +A A+
Sbjct: 17 RSLWIGDLQYWMDESYLKSCFPQSTIVS-TKVIRNKITGHHEGYGFVEFESHAAAEKALQ 75
Query: 113 SLNGRHL--FGQPIKVNWAYASGQREDTSGHFNIFVGDLSPEVTDATLFACF-SVYPSCS 169
S G + Q ++NWA G + D+ +IFVGDL+ +VTDA L F S YPS
Sbjct: 76 SFTGAVMPRTEQAFRLNWACVGGDKRDSGADDSIFVGDLAADVTDAMLLETFKSRYPSVK 135
Query: 170 DARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQ 229
A+V+ D +GR RG+GFV F ++ + SA+ ++ G + SR +R AT + +Q
Sbjct: 136 SAKVVMDVNSGRCRGYGFVRFGDETEKSSAMTEMHGVYCSSRPMRIRTATP---KKQTQQ 192
Query: 230 SSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAG 289
+ +L + A E++ TT++VG L V+ DL F G
Sbjct: 193 HPVQRVSYQLVPAYA------MPAPAGEDDFTNTTIFVGGLDQNVSLDDLKDVFSPYGE- 245
Query: 290 VIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSKP 341
I+ ++ +G GFV++ T A A A++ S + + ++ SWG P
Sbjct: 246 -IKYTKIPPGRGCGFVQFMTRASAEEALKQ---VHGSVIGQQTVRLSWGRHP 293
Score = 43.1 bits (100), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 56/111 (50%), Gaps = 2/111 (1%)
Query: 18 MQQALLQQQSLYHPGLLAAPQIEPIPSGNLPPGFDPSTCRSVYVGNIHTQVTEPLLQEVF 77
++ A ++Q+ HP + Q+ P + P G D T +++VG + V+ L++VF
Sbjct: 181 IRTATPKKQTQQHPVQRVSYQLVPAYAMPAPAGEDDFTNTTIFVGGLDQNVSLDDLKDVF 240
Query: 78 SSTGPVEGCKLIRKDKSSYGFIHYFDRRSAAMAILSLNGRHLFGQPIKVNW 128
S G ++ K+ GF+ + R SA A+ ++G + Q ++++W
Sbjct: 241 SPYGEIKYTKI--PPGRGCGFVQFMTRASAEEALKQVHGSVIGQQTVRLSW 289
>gi|302813198|ref|XP_002988285.1| hypothetical protein SELMODRAFT_447249 [Selaginella moellendorffii]
gi|300144017|gb|EFJ10704.1| hypothetical protein SELMODRAFT_447249 [Selaginella moellendorffii]
Length = 352
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 86/293 (29%), Positives = 142/293 (48%), Gaps = 22/293 (7%)
Query: 56 CRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS----YGFIHYFDRRSAAMAI 111
RS+++G++ + E L+ F + V K+IR + YGF+ + +A A+
Sbjct: 16 VRSLWIGDLQYWMDESYLKSCFPQSTIVS-TKVIRNKITGHHEGYGFVEFESHAAAEKAL 74
Query: 112 LSLNGRHL--FGQPIKVNWAYASGQREDTSGHFNIFVGDLSPEVTDATLFACF-SVYPSC 168
S G + Q ++NWA G + D+ +IFVGDL+ +VTDA L F S YPS
Sbjct: 75 QSFTGAVMPRTEQAFRLNWACVGGDKRDSGADDSIFVGDLAADVTDAMLLETFKSRYPSV 134
Query: 169 SDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDK 228
A+V+ D +GR RG+GFV F ++ + SA+ ++ G + SR +R AT + +
Sbjct: 135 KSAKVVMDVNSGRCRGYGFVRFGDEAEKSSAMTEMHGVYCSSRPMRIRTATP---KKQTQ 191
Query: 229 QSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGA 288
Q + +L + A E++ TT++VG L V+ DL F G
Sbjct: 192 QHPVQRVSYQLVPAYA------MPAPAGEDDFTNTTIFVGGLDQNVSLDDLKDVFSPYGE 245
Query: 289 GVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSKP 341
I+ ++ +G GFV++ T A A A++ S + + ++ SWG P
Sbjct: 246 --IKYTKIPPGRGCGFVQFMTRASAEEALKQ---VHGSVIGQQTVRLSWGRHP 293
Score = 43.1 bits (100), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 56/111 (50%), Gaps = 2/111 (1%)
Query: 18 MQQALLQQQSLYHPGLLAAPQIEPIPSGNLPPGFDPSTCRSVYVGNIHTQVTEPLLQEVF 77
++ A ++Q+ HP + Q+ P + P G D T +++VG + V+ L++VF
Sbjct: 181 IRTATPKKQTQQHPVQRVSYQLVPAYAMPAPAGEDDFTNTTIFVGGLDQNVSLDDLKDVF 240
Query: 78 SSTGPVEGCKLIRKDKSSYGFIHYFDRRSAAMAILSLNGRHLFGQPIKVNW 128
S G ++ K+ GF+ + R SA A+ ++G + Q ++++W
Sbjct: 241 SPYGEIKYTKI--PPGRGCGFVQFMTRASAEEALKQVHGSVIGQQTVRLSW 289
>gi|21593441|gb|AAM65408.1| putative spliceosome associated protein [Arabidopsis thaliana]
Length = 363
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 69/200 (34%), Positives = 111/200 (55%), Gaps = 10/200 (5%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDK-----SSYGFIHYFDRRSAAMAIL 112
+VYVG + Q++E LL E+F GPV + KD+ +YGFI Y A AI
Sbjct: 26 TVYVGGLDAQLSEELLWELFVQAGPVVNV-YVPKDRVTNLHQNYGFIEYRSEEDADYAIK 84
Query: 113 SLNGRHLFGQPIKVNWAYASGQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPS-CSDA 171
LN L G+PI+VN A + D N+F+G+L P+V + L+ FS + S+
Sbjct: 85 VLNMIKLHGKPIRVNKASQDKKSLDVGA--NLFIGNLDPDVDEKLLYDTFSAFGVIASNP 142
Query: 172 RVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSS 231
++M D TG SRGFGF+S+ + + + +AI +TG++L +RQI ++A K E + +
Sbjct: 143 KIMRDPDTGNSRGFGFISYDSFEASDAAIESMTGQYLSNRQITVSYAYKKDTKGE-RHGT 201
Query: 232 DAKSVVELTNGSSEDGKETT 251
A+ ++ TN +++ + T
Sbjct: 202 PAERLLAATNPTAQKSRPHT 221
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 87/203 (42%), Gaps = 44/203 (21%)
Query: 144 IFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDL 203
++VG L ++++ L+ F + V D+ T + +GF+ +R+++DA AI L
Sbjct: 27 VYVGGLDAQLSEELLWELFVQAGPVVNVYVPKDRVTNLHQNYGFIEYRSEEDADYAIKVL 86
Query: 204 TGKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYT 263
L + IR N A+ +DK+S D +
Sbjct: 87 NMIKLHGKPIRVNKAS------QDKKSLDVGA---------------------------- 112
Query: 264 TVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRD------KGFGFVRYSTHAEAALAI 317
+++GNL P+V + L+ F + G + ++ RD +GFGF+ Y + + AI
Sbjct: 113 NLFIGNLDPDVDEKLLYDTFSAFGV-IASNPKIMRDPDTGNSRGFGFISYDSFEASDAAI 171
Query: 318 QMGNTTQSSYLFGKQMKCSWGSK 340
+ + YL +Q+ S+ K
Sbjct: 172 E---SMTGQYLSNRQITVSYAYK 191
>gi|213406019|ref|XP_002173781.1| RNA-binding post-transcriptional regulator csx1
[Schizosaccharomyces japonicus yFS275]
gi|212001828|gb|EEB07488.1| RNA-binding post-transcriptional regulator csx1
[Schizosaccharomyces japonicus yFS275]
Length = 680
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 86/316 (27%), Positives = 150/316 (47%), Gaps = 35/316 (11%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKS------SYGFIHYFDRRSAAMAI 111
++++G++ + + +Q++++S G KL+R S SY F+ + ++A A+
Sbjct: 88 TLWMGDLESWMDAAFIQQLWASLGETVHVKLMRTKSSVSEGCVSYCFVQFSSPQAAEYAL 147
Query: 112 LSLNGRHL--FGQPIKVNWAYASGQREDTSG----HFNIFVGDLSPEVTDATLFACF-SV 164
L N + K+NWA G + +++FVGDL PE +A L+ F SV
Sbjct: 148 LRYNNTIIPRTHSVFKLNWATGGGIQHSAKTRREPEYSVFVGDLDPETHEAELYHTFHSV 207
Query: 165 YPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGN 224
YPSC+ A+++ D TG SR +GFV F ++++ Q A++++ G R +R + A+ +
Sbjct: 208 YPSCTSAKIIIDPVTGMSRKYGFVRFSDEREQQRALSEMQGYLCHGRPLRISVASPRSRT 267
Query: 225 NEDKQSSDAKSVVELTNGSSEDG------------KETTNTEAPEN-----NPQYTTVYV 267
+ S+ NG + +++T P+ +P TTV+V
Sbjct: 268 SISADSTTPTGAASTANGGAAASSSAVATGVTGVPSSSSSTRQPDQGLCSIDPFNTTVFV 327
Query: 268 GNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSY 327
G L T+ DL HF G I +++ KG GFV+Y+ A A AI M Q +
Sbjct: 328 GGLFSGATEKDLFYHFSPFGN--ILNIKIPPGKGCGFVQYTEKAAAEKAITM---MQGAL 382
Query: 328 LFGKQMKCSWGSKPTP 343
+ ++ +WG P
Sbjct: 383 VGPSHIRLAWGHNTLP 398
>gi|297831910|ref|XP_002883837.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297329677|gb|EFH60096.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 365
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 67/200 (33%), Positives = 111/200 (55%), Gaps = 10/200 (5%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDK-----SSYGFIHYFDRRSAAMAIL 112
++YVGN+ Q++E LL E+F GPV I KDK ++GF+ + + A AI
Sbjct: 26 TIYVGNLSPQLSEDLLLELFVQAGPVVSV-FIPKDKVTNLQQTFGFVQFRNEEDADYAIK 84
Query: 113 SLNGRHLFGQPIKVNWAYASGQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSD-A 171
N L+G+PI+V A + D N+F+G+L P+V + L+ FS + +D
Sbjct: 85 VYNMIKLYGEPIRVKKASQDKKSLDVGA--NLFIGNLDPDVDEKMLYDTFSAFGMVADHP 142
Query: 172 RVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSS 231
++M D TG RGFGF+S+ + + + +AI ++G++L SRQI ++A K E + +
Sbjct: 143 KIMRDPDTGNPRGFGFISYDSFEASDAAIEAMSGQYLSSRQITVSYAYKKDTKGE-RHGT 201
Query: 232 DAKSVVELTNGSSEDGKETT 251
A+ ++ TN SS+ + T
Sbjct: 202 QAERLLAATNPSSQRSRPHT 221
>gi|15224186|ref|NP_179441.1| splicing factor 3B subunit 4 [Arabidopsis thaliana]
gi|4218014|gb|AAD12222.1| putative spliceosome associated protein [Arabidopsis thaliana]
gi|23297611|gb|AAN12991.1| putative spliceosome-associated protein [Arabidopsis thaliana]
gi|330251682|gb|AEC06776.1| splicing factor 3B subunit 4 [Arabidopsis thaliana]
Length = 363
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 69/200 (34%), Positives = 111/200 (55%), Gaps = 10/200 (5%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDK-----SSYGFIHYFDRRSAAMAIL 112
+VYVG + Q++E LL E+F GPV + KD+ +YGFI Y A AI
Sbjct: 26 TVYVGGLDAQLSEELLWELFVQAGPVVNV-YVPKDRVTNLHQNYGFIEYRSEEDADYAIK 84
Query: 113 SLNGRHLFGQPIKVNWAYASGQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPS-CSDA 171
LN L G+PI+VN A + D N+F+G+L P+V + L+ FS + S+
Sbjct: 85 VLNMIKLHGKPIRVNKASQDKKSLDVGA--NLFIGNLDPDVDEKLLYDTFSAFGVIASNP 142
Query: 172 RVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSS 231
++M D TG SRGFGF+S+ + + + +AI +TG++L +RQI ++A K E + +
Sbjct: 143 KIMRDPDTGNSRGFGFISYDSFEASDAAIESMTGQYLSNRQITVSYAYKKDTKGE-RHGT 201
Query: 232 DAKSVVELTNGSSEDGKETT 251
A+ ++ TN +++ + T
Sbjct: 202 PAERLLAATNPTAQKSRPHT 221
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 87/203 (42%), Gaps = 44/203 (21%)
Query: 144 IFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDL 203
++VG L ++++ L+ F + V D+ T + +GF+ +R+++DA AI L
Sbjct: 27 VYVGGLDAQLSEELLWELFVQAGPVVNVYVPKDRVTNLHQNYGFIEYRSEEDADYAIKVL 86
Query: 204 TGKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYT 263
L + IR N A+ +DK+S D +
Sbjct: 87 NMIKLHGKPIRVNKAS------QDKKSLDVGA---------------------------- 112
Query: 264 TVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRD------KGFGFVRYSTHAEAALAI 317
+++GNL P+V + L+ F + G + ++ RD +GFGF+ Y + + AI
Sbjct: 113 NLFIGNLDPDVDEKLLYDTFSAFGV-IASNPKIMRDPDTGNSRGFGFISYDSFEASDAAI 171
Query: 318 QMGNTTQSSYLFGKQMKCSWGSK 340
+ + YL +Q+ S+ K
Sbjct: 172 E---SMTGQYLSNRQITVSYAYK 191
>gi|294884882|gb|ADF47449.1| TIA1-like protein [Dugesia japonica]
Length = 383
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 68/209 (32%), Positives = 112/209 (53%), Gaps = 27/209 (12%)
Query: 135 REDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQ 194
+EDTS H++IFVGD++PE+ L FS++ ++ +++ D T + +G+GFV++ ++
Sbjct: 106 QEDTSNHYHIFVGDIAPEIETQFLRERFSLFGRVTECKIIKDMHTQKPKGYGFVAYATKE 165
Query: 195 DAQSAINDLTGKWLGSRQIRCNWATKGAGN--NEDKQSSDAKSVVELTNGSSEDGKETTN 252
+A+ A+N + GK+LG+RQIR NWA + +D++ D V SSE
Sbjct: 166 EAEEALNKMNGKFLGTRQIRTNWAIRRPPQPPGKDQKPLDYNEVFA---ASSESN----- 217
Query: 253 TEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAE 312
T+YVG + + + L F G I EVR+ ++KG+ FVR+ +H
Sbjct: 218 ----------CTIYVGGITNGLCEELLRESFKEFGD--ILEVRIFKEKGYAFVRFDSHEG 265
Query: 313 AALAIQMGNTTQSSYLFGKQM-KCSWGSK 340
A AI + + G Q+ KCSWG +
Sbjct: 266 ATQAIIRMHGKE----VGSQLCKCSWGKE 290
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 107/242 (44%), Gaps = 30/242 (12%)
Query: 10 QQQQQQALMQQALLQQQSLYHPGLLAAPQIEPIPSGNLPPGFDPSTCRSVYVGNIHTQVT 69
Q + +A + Q +L P L APQ P N+ D S ++VG+I ++
Sbjct: 67 QLNKYKAFGEVNRYQTHTLTIPQLTLAPQTHA-PINNISTQEDTSNHYHIFVGDIAPEIE 125
Query: 70 EPLLQEVFSSTGPVEGCKLIR----KDKSSYGFIHYFDRRSAAMAILSLNGRHLFGQPIK 125
L+E FS G V CK+I+ + YGF+ Y + A A+ +NG+ L + I+
Sbjct: 126 TQFLRERFSLFGRVTECKIIKDMHTQKPKGYGFVAYATKEEAEEALNKMNGKFLGTRQIR 185
Query: 126 VNWA----------------YASGQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCS 169
NWA Y + + I+VG ++ + + L F +
Sbjct: 186 TNWAIRRPPQPPGKDQKPLDYNEVFAASSESNCTIYVGGITNGLCEELLRESFKEFGDIL 245
Query: 170 DARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQ 229
+ R+ + +G+ FV F + + A AI + GK +GS+ +C+W G +N+ K+
Sbjct: 246 EVRIF------KEKGYAFVRFDSHEGATQAIIRMHGKEVGSQLCKCSW---GKESNDLKE 296
Query: 230 SS 231
+S
Sbjct: 297 TS 298
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 53/106 (50%), Gaps = 9/106 (8%)
Query: 252 NTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLG----AGVIEEVRVQRDKGFGFVRY 307
N E+ + ++VG++APE+ L F G +I+++ Q+ KG+GFV Y
Sbjct: 102 NISTQEDTSNHYHIFVGDIAPEIETQFLRERFSLFGRVTECKIIKDMHTQKPKGYGFVAY 161
Query: 308 STHAEAALAIQMGNTTQSSYLFGKQMKCSWGSK--PTPPGTSSNPL 351
+T EA A+ N +L +Q++ +W + P PPG PL
Sbjct: 162 ATKEEAEEAL---NKMNGKFLGTRQIRTNWAIRRPPQPPGKDQKPL 204
>gi|224062834|ref|XP_002300896.1| predicted protein [Populus trichocarpa]
gi|222842622|gb|EEE80169.1| predicted protein [Populus trichocarpa]
Length = 648
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/275 (28%), Positives = 134/275 (48%), Gaps = 44/275 (16%)
Query: 57 RSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKS----SYGFIHYFDRRSAAMAIL 112
RS+YVG++ V E L ++FS PV ++ R Y ++++ + + AA A+
Sbjct: 33 RSLYVGDLEHNVKEGQLFDLFSQVAPVVSTRVCRDQAGLTSLGYAYVNFSNPQDAAKAME 92
Query: 113 SLNGRHLFGQPIKVNWAYASGQREDT---SGHFNIFVGDLSPEVTDATLFACFSVYPSCS 169
LN L G+PI++ +++ R+ T SGH N+F+ +L ++ + L+ F+ +
Sbjct: 93 VLNFTPLNGKPIRIMFSH----RDPTTRRSGHANVFIKNLDTKIDNKALYETFASFGPVL 148
Query: 170 DARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQ 229
+V D G+S+G+GF+ F N++DAQSAIN L G + R++ + E
Sbjct: 149 SCKVAVDN-NGQSKGYGFIQFENEEDAQSAINRLNGMLVNDREVYVGPFVRRLERIE--- 204
Query: 230 SSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGA- 288
NGS P++T VYV NL+ + DL + F S GA
Sbjct: 205 ----------ANGS----------------PKFTNVYVKNLSETTSDEDLKKIFSSYGAI 238
Query: 289 --GVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGN 321
++ + + + +GFGFV + + AA A++ N
Sbjct: 239 TSAIVMKDQNGKSRGFGFVNFQSPDSAAAAVEKLN 273
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 83/285 (29%), Positives = 130/285 (45%), Gaps = 35/285 (12%)
Query: 52 DPSTCRS----VYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDK---SSYGFIHYFDR 104
DP+T RS V++ N+ T++ L E F+S GPV CK+ + YGFI + +
Sbjct: 112 DPTTRRSGHANVFIKNLDTKIDNKALYETFASFGPVLSCKVAVDNNGQSKGYGFIQFENE 171
Query: 105 RSAAMAILSLNGRHLFGQPIKVNWAYASGQREDTSG---HFNIFVGDLSPEVTDATLFAC 161
A AI LNG + + + V +R + +G N++V +LS +D L
Sbjct: 172 EDAQSAINRLNGMLVNDREVYVGPFVRRLERIEANGSPKFTNVYVKNLSETTSDEDLKKI 231
Query: 162 FSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKG 221
FS Y + + A VM DQ G+SRGFGFV+F++ A +A+ L G + W G
Sbjct: 232 FSSYGAITSAIVMKDQ-NGKSRGFGFVNFQSPDSAAAAVEKLNGMTFSDKV----WYV-G 285
Query: 222 AGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHR 281
+ ++ ++ K+ E S + + N +Y+ NL + + L
Sbjct: 286 RAQRKGEREAELKAKFEQERNSRYEKMKAAN------------LYLKNLGDTIDEERLKE 333
Query: 282 HFHSLGAGVIEEVRVQRD-----KGFGFVRYSTHAEAALAIQMGN 321
F G+ I +V D KG GFV +ST EA+ A+ N
Sbjct: 334 LFSEFGS--ITSCKVMLDQQGLSKGSGFVAFSTPEEASRALSEMN 376
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 91/182 (50%), Gaps = 21/182 (11%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS----YGFIHYFDRRSAAMAILS 113
+VYV N+ ++ L+++FSS G + ++ KD++ +GF+++ SAA A+
Sbjct: 213 NVYVKNLSETTSDEDLKKIFSSYGAITSA-IVMKDQNGKSRGFGFVNFQSPDSAAAAVEK 271
Query: 114 LNGRHLFGQPIKVNWAYASGQRE-DTSGHF--------------NIFVGDLSPEVTDATL 158
LNG + V A G+RE + F N+++ +L + + L
Sbjct: 272 LNGMTFSDKVWYVGRAQRKGEREAELKAKFEQERNSRYEKMKAANLYLKNLGDTIDEERL 331
Query: 159 FACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWA 218
FS + S + +VM DQ+ G S+G GFV+F ++A A++++ GK +G + + A
Sbjct: 332 KELFSEFGSITSCKVMLDQQ-GLSKGSGFVAFSTPEEASRALSEMNGKMIGKKPLYVAIA 390
Query: 219 TK 220
+
Sbjct: 391 QR 392
>gi|356532261|ref|XP_003534692.1| PREDICTED: splicing factor 3B subunit 4-like [Glycine max]
Length = 365
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 66/200 (33%), Positives = 111/200 (55%), Gaps = 10/200 (5%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS-----YGFIHYFDRRSAAMAIL 112
+ YVGN+ Q++E LL E+F GPV + KD+ + YGF+ + A AI
Sbjct: 26 TAYVGNLDPQISEELLWELFVQAGPVVNV-YVPKDRVTNQHQGYGFVEFRSEEDADYAIK 84
Query: 113 SLNGRHLFGQPIKVNWAYASGQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPS-CSDA 171
LN L+G+PI+VN A + D N+F+G+L P+V + L+ FS + ++
Sbjct: 85 VLNMIKLYGKPIRVNKASQDKKSLDVGA--NLFIGNLDPDVDEKLLYDTFSAFGVIVTNP 142
Query: 172 RVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSS 231
++M D TG SRGFGF+S+ + + + SAI + G++L +RQI ++A K E + +
Sbjct: 143 KIMRDPDTGNSRGFGFISYDSFEASDSAIEAMNGQYLCNRQITVSYAYKKDTKGE-RHGT 201
Query: 232 DAKSVVELTNGSSEDGKETT 251
A+ V+ +N +++ + T
Sbjct: 202 PAERVLAASNPTTQKSRPHT 221
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 103/231 (44%), Gaps = 55/231 (23%)
Query: 116 GRHLFGQPIKVNWAYASGQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMW 175
G +L GQ +A+ + +D + +VG+L P++++ L+ F + V
Sbjct: 10 GANLLGQ-------HAAERNQDATA----YVGNLDPQISEELLWELFVQAGPVVNVYVPK 58
Query: 176 DQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSSDAKS 235
D+ T + +G+GFV FR+++DA AI L L + IR N A+ +DK+S D +
Sbjct: 59 DRVTNQHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKAS------QDKKSLDVGA 112
Query: 236 VVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVR 295
+++GNL P+V + L+ F + G ++ +
Sbjct: 113 ----------------------------NLFIGNLDPDVDEKLLYDTFSAFGV-IVTNPK 143
Query: 296 VQRD------KGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSK 340
+ RD +GFGF+ Y + + AI+ N YL +Q+ S+ K
Sbjct: 144 IMRDPDTGNSRGFGFISYDSFEASDSAIEAMN---GQYLCNRQITVSYAYK 191
>gi|444723404|gb|ELW64061.1| Nucleolysin TIA-1 [Tupaia chinensis]
Length = 387
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 69/184 (37%), Positives = 98/184 (53%), Gaps = 36/184 (19%)
Query: 60 YVGNIHTQVTEPLLQEVFSSTGPVEGCKLI-----------------------------R 90
YVGN+ VTE L+ ++FS GP + CK+I R
Sbjct: 5 YVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFHEHRHAAAALAAMNGR 64
Query: 91 K------DKSSYGFIHYFDRRSAAMAILSLNGRHLFGQPIKVNWAYA-SGQREDTSGHFN 143
K Y F+ + + R AA A+ ++NGR + G+ +KVNWA S Q++DTS HF+
Sbjct: 65 KIMGKTAGNDPYCFVEFHEHRHAAAALAAMNGRKIMGKEVKVNWATTPSSQKKDTSNHFH 124
Query: 144 IFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDL 203
+FVGDLSPE+T + A F+ + SDARV+ D TG+S+G+GFVSF N+ Q
Sbjct: 125 VFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWQNQIGYPPP 184
Query: 204 TGKW 207
G+W
Sbjct: 185 YGQW 188
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 86/178 (48%), Gaps = 26/178 (14%)
Query: 145 FVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLT 204
+VG+LS +VT+A + FS C + +++ D T + + FV F + A +A+ +
Sbjct: 5 YVGNLSRDVTEALILQLFSQIGPCKNCKMIMD--TAGNDPYCFVEFHEHRHAAAALAAMN 62
Query: 205 GKWLGSRQIRCNWATKGAGNN-----EDKQSSDAKSVVELTNGSSEDGKE------TTNT 253
G R+I K AGN+ E + A + + NG GKE TT +
Sbjct: 63 G-----RKI----MGKTAGNDPYCFVEFHEHRHAAAALAAMNGRKIMGKEVKVNWATTPS 113
Query: 254 EAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLG----AGVIEEVRVQRDKGFGFVRY 307
++ + V+VG+L+PE+T D+ F G A V++++ + KG+GFV +
Sbjct: 114 SQKKDTSNHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSF 171
>gi|315043939|ref|XP_003171345.1| RNA-binding post-transcriptional regulator csx1 [Arthroderma
gypseum CBS 118893]
gi|311343688|gb|EFR02891.1| RNA-binding post-transcriptional regulator csx1 [Arthroderma
gypseum CBS 118893]
Length = 412
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 98/326 (30%), Positives = 150/326 (46%), Gaps = 37/326 (11%)
Query: 43 PSGNLPPGFDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS----YGF 98
PSG+ P P ++++G + + E ++ ++ G K+IR S Y F
Sbjct: 49 PSGS-PGNQQPDGKTTLWMGELEGWIDENFIRNIWYQMGEQVNVKMIRDKFSGANAGYCF 107
Query: 99 IHYFDRRSAAMAILSLNGRHLFG--QPIKVNWAYASG----QREDTSGHFNIFVGDLSPE 152
+ F +AA L++NG + +P K+NWA G RE+ F+IFVGDL PE
Sbjct: 108 VD-FATPAAAAKALTVNGTPMPNTQRPFKLNWASGGGLADRSREERGPEFSIFVGDLGPE 166
Query: 153 VTDATLFACF-SVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSR 211
V + L + F S +PSC A++M D TG SRG+GFV F ++ D Q A++++ G + G+R
Sbjct: 167 VNEYVLVSLFQSRFPSCKSAKIMTDPITGLSRGYGFVRFSDETDQQRALSEMQGVYCGNR 226
Query: 212 QIRCNWAT------KGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTE--------APE 257
+R + AT G G G AP+
Sbjct: 227 PMRISTATPKNKGPAGPGGPAHMGVPGGPPGGMYPPSMGGAGGPPGPGGPQMGYYGAAPQ 286
Query: 258 -----NNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAE 312
+P TTV+VG L+ VT+ +L F G G I V++ KG GFV++
Sbjct: 287 PMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQ--GFGEITYVKIPPGKGCGFVQFVQRHA 344
Query: 313 AALAIQMGNTTQSSYLFGKQMKCSWG 338
A +AI N Q + +++ SWG
Sbjct: 345 AEMAI---NQMQGYPIGNSRVRLSWG 367
>gi|342875796|gb|EGU77504.1| hypothetical protein FOXB_11986 [Fusarium oxysporum Fo5176]
Length = 405
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 93/305 (30%), Positives = 148/305 (48%), Gaps = 30/305 (9%)
Query: 58 SVYVGNIHTQVTEPLLQEVF-SSTGPVEGCKLIRKDKSS---YGFIHYFDRRSAAMAILS 113
++++G + + E ++ VF S+ K+IR S Y F+ F AA L
Sbjct: 45 TLWMGELEPWMDENFIKGVFMSAAHETVNVKVIRDKNSGNAGYCFVE-FQSPEAATNALG 103
Query: 114 LNGRHLFG--QPIKVNWAYASG---QREDTSGHFNIFVGDLSPEVTDATLFACFSV-YPS 167
+NG+ + + K+NWA G +R+D ++IFVGDL PEV + L + F +PS
Sbjct: 104 MNGKPVPNSQRSFKLNWASGGGLVDRRDDRGPEYSIFVGDLGPEVNEYVLVSLFQARFPS 163
Query: 168 CSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATK------- 220
C A++M D +G+SRG+GFV F ++ D Q A+ ++ G + G+R +R + AT
Sbjct: 164 CKSAKIMTDAMSGQSRGYGFVRFSDENDQQRALVEMQGVYCGNRPMRISTATPKNRGNHG 223
Query: 221 --GAGNNEDKQSSDAKSVVELTNGSSEDGKETT--NTEAPEN---NPQYTTVYVGNLAPE 273
G G++ ++ NG G N N +P TTV+VG L+
Sbjct: 224 FGGQGHHNGGPMMGGMPQQQMWNGGGMQGFGYGGFNPATQMNQFTDPNNTTVFVGGLSGY 283
Query: 274 VTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQM 333
VT+ +L F G G I V++ KG GFV++ A +AI N Q + ++
Sbjct: 284 VTEDELRSFFQ--GFGEITYVKIPPGKGCGFVQFVHRHAAEMAI---NQMQGYPIGNSRV 338
Query: 334 KCSWG 338
+ SWG
Sbjct: 339 RLSWG 343
>gi|254578926|ref|XP_002495449.1| ZYRO0B11660p [Zygosaccharomyces rouxii]
gi|238938339|emb|CAR26516.1| ZYRO0B11660p [Zygosaccharomyces rouxii]
Length = 587
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 83/308 (26%), Positives = 142/308 (46%), Gaps = 46/308 (14%)
Query: 26 QSLYHPGLLAAPQIEPIPSGNLPPGFDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEG 85
+ L L APQ P + + + ST S+YVG + V+E LL ++FS G V
Sbjct: 10 EQLEQLNLQEAPQTAPTSTDSDSQKVETSTA-SLYVGELDPTVSEALLYDIFSPIGSVSS 68
Query: 86 CKLIR----KDKSSYGFIHYFDRRSAAMAILSLNGRHLFGQPIKVNWAYASGQREDT--- 138
++ R K Y ++++ D + AI LN + GQP ++ W+ QR+ +
Sbjct: 69 IRVCRDAITKTSLGYAYVNFNDYEAGRQAIEKLNYTPIKGQPCRIMWS----QRDPSLRK 124
Query: 139 SGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQS 198
G NIF+ +L ++ + L FSV+ + ++ D+ TG S+GFGFV F + + A+
Sbjct: 125 KGSGNIFIKNLHADIDNKALHDTFSVFGNILSCKIATDEVTGNSKGFGFVHFESDEAARE 184
Query: 199 AINDLTGKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPEN 258
AI+ + G L +++ + +D+QS + E
Sbjct: 185 AIDAINGMLLNGQEVYVAPHV----SRKDRQS-----------------------KLEEA 217
Query: 259 NPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRD-----KGFGFVRYSTHAEA 313
+T VY+ N++ E + + F + + V +++D +GFGFV Y THA A
Sbjct: 218 KANFTNVYIKNISLETPEQEFEEFFKKVAP--VTSVHLEKDSEGKLRGFGFVNYETHAGA 275
Query: 314 ALAIQMGN 321
A A++ N
Sbjct: 276 AKAVEELN 283
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 69/288 (23%), Positives = 119/288 (41%), Gaps = 38/288 (13%)
Query: 52 DPSTCR----SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKL----IRKDKSSYGFIHYFD 103
DPS + ++++ N+H + L + FS G + CK+ + + +GF+H+
Sbjct: 119 DPSLRKKGSGNIFIKNLHADIDNKALHDTFSVFGNILSCKIATDEVTGNSKGFGFVHFES 178
Query: 104 RRSAAMAILSLNGRHLFGQPIKVNWAYASGQR----EDTSGHF-NIFVGDLSPEVTDATL 158
+A AI ++NG L GQ + V + R E+ +F N+++ ++S E +
Sbjct: 179 DEAAREAIDAINGMLLNGQEVYVAPHVSRKDRQSKLEEAKANFTNVYIKNISLETPEQEF 238
Query: 159 FACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWA 218
F + + D + G+ RGFGFV++ A A+ +L G +Q+ A
Sbjct: 239 EEFFKKVAPVTSVHLEKDSE-GKLRGFGFVNYETHAGAAKAVEELNGVEFHGQQLHVGRA 297
Query: 219 TKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLD 278
K ++ + +S +E Q +++ NL +
Sbjct: 298 QKKYERQQELRRQYEQSKLEKMEKY-----------------QGVNLFIKNLDDSIDDER 340
Query: 279 LHRHFHSLGAGVIEEVRVQ-----RDKGFGFVRYSTHAEAALAIQMGN 321
L F G I V+V + KGFGFV +ST EA AI N
Sbjct: 341 LREEFSPF--GTITSVKVMTTENGKSKGFGFVCFSTPEEATKAITEKN 386
>gi|428172560|gb|EKX41468.1| hypothetical protein GUITHDRAFT_141953 [Guillardia theta CCMP2712]
Length = 439
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 86/292 (29%), Positives = 146/292 (50%), Gaps = 23/292 (7%)
Query: 57 RSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSSYGFIHYFDRRSAAMAILSLNG 116
R ++V + V E LL +F + G + C++I +G+ + D SA++A+ SLNG
Sbjct: 7 RCLHVTGLSPLVDETLLSSIFGAFGQLTSCRIIPDANGIHGYCDFADFSSASVALASLNG 66
Query: 117 RHLFGQPIKVNWAY-ASGQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMW 175
R + G P+ V+W +G +EDTS H +FVG++ + + LF F+ + +CSD+R++
Sbjct: 67 REVLGSPLNVSWHLQQAGPKEDTSNHITVFVGNIGDIIDEYMLFESFAHF-NCSDSRIIR 125
Query: 176 DQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSSDAKS 235
G+ G+GFV+ R Q + + G+ + G +S D ++
Sbjct: 126 GDD-GKCLGYGFVTIRTQVTEFGLLLQRFDRSAGTGGCKRRCCCHG------WRSVDGEA 178
Query: 236 VVELTNGSSE-------DGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGA 288
+ ++ ++ +T +A E+N TTV+VGNL ++ L + F G
Sbjct: 179 LADVNAAANRPPDPPPSTDAQTVAKQASESN---TTVHVGNLVGTESEEALKKAFAKHGE 235
Query: 289 GVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSK 340
I+ VRV K F FV Y+TH AA AI N T+ L + +KC+W ++
Sbjct: 236 --IDNVRVP-GKNFAFVTYTTHKAAAAAIAALNGTKPPGLT-RPLKCTWAAE 283
>gi|14334958|gb|AAK59656.1| putative spliceosome associated protein [Arabidopsis thaliana]
Length = 363
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 68/200 (34%), Positives = 111/200 (55%), Gaps = 10/200 (5%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDK-----SSYGFIHYFDRRSAAMAIL 112
+VYVG + Q++E LL E+F GPV + KD+ +YGFI Y A AI
Sbjct: 26 TVYVGGLDAQLSEELLWELFVQAGPVVNV-YVPKDRVTNLHQNYGFIEYRSEEDADYAIK 84
Query: 113 SLNGRHLFGQPIKVNWAYASGQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPS-CSDA 171
LN L G+P++VN A + D N+F+G+L P+V + L+ FS + S+
Sbjct: 85 VLNMIKLHGKPMRVNKASQDKKSLDVGA--NLFIGNLDPDVDEKLLYDTFSAFGVIASNP 142
Query: 172 RVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSS 231
++M D TG SRGFGF+S+ + + + +AI +TG++L +RQI ++A K E + +
Sbjct: 143 KIMRDPDTGNSRGFGFISYDSFEASDAAIESMTGQYLSNRQITVSYAYKKDTKGE-RHGT 201
Query: 232 DAKSVVELTNGSSEDGKETT 251
A+ ++ TN +++ + T
Sbjct: 202 PAERLLAATNPTAQKSRPHT 221
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 87/203 (42%), Gaps = 44/203 (21%)
Query: 144 IFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDL 203
++VG L ++++ L+ F + V D+ T + +GF+ +R+++DA AI L
Sbjct: 27 VYVGGLDAQLSEELLWELFVQAGPVVNVYVPKDRVTNLHQNYGFIEYRSEEDADYAIKVL 86
Query: 204 TGKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYT 263
L + +R N A+ +DK+S D +
Sbjct: 87 NMIKLHGKPMRVNKAS------QDKKSLDVGA---------------------------- 112
Query: 264 TVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRD------KGFGFVRYSTHAEAALAI 317
+++GNL P+V + L+ F + G + ++ RD +GFGF+ Y + + AI
Sbjct: 113 NLFIGNLDPDVDEKLLYDTFSAFGV-IASNPKIMRDPDTGNSRGFGFISYDSFEASDAAI 171
Query: 318 QMGNTTQSSYLFGKQMKCSWGSK 340
+ + YL +Q+ S+ K
Sbjct: 172 E---SMTGQYLSNRQITVSYAYK 191
>gi|357460829|ref|XP_003600696.1| Splicing factor 3B subunit [Medicago truncatula]
gi|355489744|gb|AES70947.1| Splicing factor 3B subunit [Medicago truncatula]
Length = 379
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 66/200 (33%), Positives = 111/200 (55%), Gaps = 10/200 (5%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS-----YGFIHYFDRRSAAMAIL 112
+ YVGN+ Q++E LL E+F GPV + KD+ + YGF+ + A AI
Sbjct: 26 TAYVGNLDPQISEELLWELFVQAGPVVNV-YVPKDRVTNQHQGYGFVEFRSEEDADYAIK 84
Query: 113 SLNGRHLFGQPIKVNWAYASGQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPS-CSDA 171
LN L+G+PI+VN A + D N+F+G+L P+V + L+ FS + ++
Sbjct: 85 VLNMIKLYGKPIRVNKASQDKKSLDVGA--NLFIGNLDPDVDEKLLYDTFSAFGVIVTNP 142
Query: 172 RVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSS 231
++M D TG SRGFGF+S+ + + + SAI + G++L +RQI ++A K E + +
Sbjct: 143 KIMRDPDTGNSRGFGFISYDSFEASDSAIEAMNGQYLCNRQITVSYAYKKDTKGE-RHGT 201
Query: 232 DAKSVVELTNGSSEDGKETT 251
A+ V+ +N +++ + T
Sbjct: 202 PAERVLAASNPTAQKSRPHT 221
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 91/202 (45%), Gaps = 44/202 (21%)
Query: 145 FVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLT 204
+VG+L P++++ L+ F + V D+ T + +G+GFV FR+++DA AI L
Sbjct: 28 YVGNLDPQISEELLWELFVQAGPVVNVYVPKDRVTNQHQGYGFVEFRSEEDADYAIKVLN 87
Query: 205 GKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTT 264
L + IR N A+ +DK+S D +
Sbjct: 88 MIKLYGKPIRVNKAS------QDKKSLDVGA----------------------------N 113
Query: 265 VYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRD------KGFGFVRYSTHAEAALAIQ 318
+++GNL P+V + L+ F + G ++ ++ RD +GFGF+ Y + + AI+
Sbjct: 114 LFIGNLDPDVDEKLLYDTFSAFGV-IVTNPKIMRDPDTGNSRGFGFISYDSFEASDSAIE 172
Query: 319 MGNTTQSSYLFGKQMKCSWGSK 340
N YL +Q+ S+ K
Sbjct: 173 AMN---GQYLCNRQITVSYAYK 191
Score = 42.7 bits (99), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 47/86 (54%), Gaps = 11/86 (12%)
Query: 261 QYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDK------GFGFVRYSTHAEAA 314
Q T YVGNL P++++ L F + AG + V V +D+ G+GFV + + +A
Sbjct: 23 QDATAYVGNLDPQISEELLWELF--VQAGPVVNVYVPKDRVTNQHQGYGFVEFRSEEDAD 80
Query: 315 LAIQMGNTTQSSYLFGKQMKCSWGSK 340
AI++ N + L+GK ++ + S+
Sbjct: 81 YAIKVLNMIK---LYGKPIRVNKASQ 103
>gi|452844119|gb|EME46053.1| hypothetical protein DOTSEDRAFT_70146 [Dothistroma septosporum
NZE10]
Length = 407
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 95/317 (29%), Positives = 144/317 (45%), Gaps = 49/317 (15%)
Query: 45 GNLPPGFDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSSYGFIHYFDR 104
G L P D + RSV+ G + QV ++++ FS + + Y F+ + +
Sbjct: 76 GELEPWIDENFVRSVWFG-MGYQVNVKMIRDKFSGS------------NAGYCFVDFENP 122
Query: 105 RSAAMAILSLNGRHL--FGQPIKVNWAYASG----QREDTSGHFNIFVGDLSPEVTDATL 158
SA A L LNG+ + + K+NWA G R+D ++IFVGDL PEV + L
Sbjct: 123 ESATRA-LQLNGQVIPNSNRQFKLNWASGGGLADRSRDDRGPEYSIFVGDLGPEVNEYVL 181
Query: 159 FACF-SVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNW 217
+ F Y SC A++M D +G SRG+GFV F ++ D Q A++++ G + G+R +R +
Sbjct: 182 MSLFQGKYTSCKSAKIMSDPISGMSRGYGFVRFADEGDQQKALHEMQGVYCGNRPMRIST 241
Query: 218 ATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEA-------------PEN---NPQ 261
AT K S A P N +P
Sbjct: 242 ATP-------KNKSGGGGPGMPGMQGGMGPGAPGGVYAMGAPPMGYYGAPQPMNQFTDPN 294
Query: 262 YTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGN 321
TTV+VG L+ VT+ +L F G G I V++ KG GFV++ A +AI N
Sbjct: 295 NTTVFVGGLSGYVTEDELRSFFQ--GFGEITYVKIPPGKGCGFVQFVQRHAAEMAI---N 349
Query: 322 TTQSSYLFGKQMKCSWG 338
Q + +++ SWG
Sbjct: 350 QMQGYPIGNSRVRLSWG 366
>gi|159164088|pdb|2DGO|A Chain A, Solution Structure Of The Rna Binding Domain In Cytotoxic
Granule-Associated Rna Binding Protein 1
gi|211938969|pdb|2RNE|A Chain A, Solution Structure Of The Second Rna Recognition Motif
(Rrm) Of Tia-1
Length = 115
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 51/90 (56%), Positives = 70/90 (77%)
Query: 131 ASGQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSF 190
+SGQ++DTS HF++FVGDLSPE+T + A F+ + SDARV+ D TG+S+G+GFVSF
Sbjct: 5 SSGQKKDTSNHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSF 64
Query: 191 RNQQDAQSAINDLTGKWLGSRQIRCNWATK 220
N+ DA++AI + G+WLG RQIR NWAT+
Sbjct: 65 FNKWDAENAIQQMGGQWLGGRQIRTNWATR 94
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 59/109 (54%), Gaps = 18/109 (16%)
Query: 240 TNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLG----AGVIEEVR 295
++GSS K+T+N + V+VG+L+PE+T D+ F G A V++++
Sbjct: 2 SSGSSGQKKDTSN---------HFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMA 52
Query: 296 VQRDKGFGFVRYSTHAEAALAI-QMGNTTQSSYLFGKQMKCSWGSKPTP 343
+ KG+GFV + +A AI QMG +L G+Q++ +W ++ P
Sbjct: 53 TGKSKGYGFVSFFNKWDAENAIQQMGG----QWLGGRQIRTNWATRKPP 97
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 43/82 (52%), Gaps = 4/82 (4%)
Query: 52 DPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRK----DKSSYGFIHYFDRRSA 107
D S V+VG++ ++T ++ F+ G + ++++ YGF+ +F++ A
Sbjct: 11 DTSNHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDA 70
Query: 108 AMAILSLNGRHLFGQPIKVNWA 129
AI + G+ L G+ I+ NWA
Sbjct: 71 ENAIQQMGGQWLGGRQIRTNWA 92
>gi|402077003|gb|EJT72352.1| tRNA selenocysteine-associated protein 1 [Gaeumannomyces graminis
var. tritici R3-111a-1]
Length = 423
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 93/313 (29%), Positives = 149/313 (47%), Gaps = 37/313 (11%)
Query: 57 RSVYVGNIHTQVTEPLLQEVFSST-GPVEGCKLIRKDKSS---YGFIHYFDRRSAAMAIL 112
+++++G + + E +++V+ + G K+IR +S Y F+ F+ AA L
Sbjct: 43 KTLWMGELEPWMDENFVKQVWQTVCGEAVNVKVIRDRQSGNAGYCFVE-FNSAEAANKAL 101
Query: 113 SLNGRHLFG--QPIKVNWAYASG---QREDTSGHFNIFVGDLSPEVTDATLFACFSV-YP 166
LNG + + K+NWA G +R++ F+IFVGDL PEV + L + F +P
Sbjct: 102 QLNGSPVPNSQRVFKLNWASGGGLVDRRDERGPEFSIFVGDLGPEVNEFVLVSLFQARFP 161
Query: 167 SCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT------- 219
SC A++M D TG+SRG+GFV F ++ D Q A+ ++ G + G+R +R + AT
Sbjct: 162 SCKSAKIMTDAMTGQSRGYGFVRFTDEGDQQRALLEMQGVYCGNRPMRISTATPKTRSHQ 221
Query: 220 --KGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPEN------------NPQYTTV 265
G + A + + N G A N +P TTV
Sbjct: 222 QYSAQGQHGGPMPMAAPAQQQNMNWGMPYGFNQPAPPAANNFNAAMQPMNQFTDPNNTTV 281
Query: 266 YVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQS 325
+VG L+ VT+ +L F G G I V++ KG GFV++ A +AI N Q
Sbjct: 282 FVGGLSGYVTEDELRSFFQ--GFGDITYVKIPPGKGCGFVQFVHRHAAEMAI---NQMQG 336
Query: 326 SYLFGKQMKCSWG 338
+ +++ SWG
Sbjct: 337 YPIGNSRVRLSWG 349
>gi|449302980|gb|EMC98988.1| hypothetical protein BAUCODRAFT_386817 [Baudoinia compniacensis
UAMH 10762]
Length = 431
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 93/316 (29%), Positives = 144/316 (45%), Gaps = 44/316 (13%)
Query: 45 GNLPPGFDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSSYGFIHYFDR 104
G L P D + RSV+ G + QV ++++ FS + + Y F+ + +
Sbjct: 86 GELEPWIDENFVRSVWFG-MGYQVNVKMIRDKFSGS------------NAGYCFVDFENT 132
Query: 105 RSAAMAILSLNGRHL--FGQPIKVNWAYASG----QREDTSGHFNIFVGDLSPEVTDATL 158
SA A L LNG+ + + K+NWA G R+D ++IFVGDL PEV + L
Sbjct: 133 DSAGRA-LQLNGQMIPNSNRQFKLNWASGGGLADRSRDDRGPEYSIFVGDLGPEVNEYVL 191
Query: 159 FACF-SVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNW 217
+ F Y SC A++M D +G SRG+GFV F ++QD Q A++++ G + G+R +R +
Sbjct: 192 MSLFQGKYNSCKSAKIMSDPISGMSRGYGFVRFSDEQDQQKALHEMQGVYCGNRPMRIST 251
Query: 218 ATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPE---------------NNPQY 262
AT N+ + G +P
Sbjct: 252 ATP---KNKSGGGGPGMGGMPGGMQPGMYGMGQPPMSGGGGGGGYYPQQQPMNQFTDPNN 308
Query: 263 TTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNT 322
TTV+VG L+ VT+ +L F G G I V++ KG GFV++ A +AI N
Sbjct: 309 TTVFVGGLSGYVTEDELRSFFQ--GFGEITYVKIPPGKGCGFVQFVHRHAAEMAI---NQ 363
Query: 323 TQSSYLFGKQMKCSWG 338
Q + +++ SWG
Sbjct: 364 MQGYPIGNSRVRLSWG 379
>gi|147856810|emb|CAN81343.1| hypothetical protein VITISV_008697 [Vitis vinifera]
Length = 536
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 83/265 (31%), Positives = 134/265 (50%), Gaps = 27/265 (10%)
Query: 87 KLIRKDKSS----YGFIHYFDRRSAAMAILSLNGRHL--FGQPIKVNWAYAS--GQREDT 138
K+IR ++ YGF+ +F +A + G + QP ++NWA S +R D
Sbjct: 2 KVIRNKQTGSSEGYGFVEFFSHAAAEKVLQGYAGVLMPNTDQPFRLNWATFSMGDKRSDN 61
Query: 139 SGHFNIFVGDLSPEVTDATLFACFS-VYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQ 197
+IFVGDL+ +V+D+ L F+ YPS A+V++D TGRS+G+GFV F ++ +
Sbjct: 62 GPDLSIFVGDLASDVSDSLLHETFAGKYPSVKAAKVVFDANTGRSKGYGFVRFGDENERS 121
Query: 198 SAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPE 257
A+ ++ G + SR +R AT ++SS + G + +G + +
Sbjct: 122 QAMTEMNGVYCSSRPMRIGAATP-------RKSSGYQQQYSSHGGYASNGASVQS----D 170
Query: 258 NNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAI 317
+ TT++VG L P V+ DL + F G I V++ KG GFV+++ A A+
Sbjct: 171 GDSMNTTIFVGGLDPNVSDEDLRQPFSQYGE--IVSVKIPVGKGCGFVQFANRNNAEDAL 228
Query: 318 QMGNTTQSSYLFGKQ-MKCSWGSKP 341
Q N T + GKQ ++ SWG P
Sbjct: 229 QKLNGT----VIGKQTVRLSWGRNP 249
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 86/187 (45%), Gaps = 32/187 (17%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGP-VEGCKLIRKDKSS----YGFIHYFDRRSAAMAIL 112
S++VG++ + V++ LL E F+ P V+ K++ + YGF+ + D + A+
Sbjct: 66 SIFVGDLASDVSDSLLHETFAGKYPSVKAAKVVFDANTGRSKGYGFVRFGDENERSQAMT 125
Query: 113 SLNGRHLFGQPIKVNWA-----------------YASG----QREDTSGHFNIFVGDLSP 151
+NG + +P+++ A YAS Q + S + IFVG L P
Sbjct: 126 EMNGVYCSSRPMRIGAATPRKSSGYQQQYSSHGGYASNGASVQSDGDSMNTTIFVGGLDP 185
Query: 152 EVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSR 211
V+D L FS Y ++ +G GFV F N+ +A+ A+ L G +G +
Sbjct: 186 NVSDEDLRQPFSQYGEIVSVKIP------VGKGCGFVQFANRNNAEDALQKLNGTVIGKQ 239
Query: 212 QIRCNWA 218
+R +W
Sbjct: 240 TVRLSWG 246
>gi|255550690|ref|XP_002516394.1| spliceosome associated protein, putative [Ricinus communis]
gi|223544492|gb|EEF46011.1| spliceosome associated protein, putative [Ricinus communis]
Length = 376
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 68/200 (34%), Positives = 110/200 (55%), Gaps = 10/200 (5%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS-----YGFIHYFDRRSAAMAIL 112
+ YVGN+ QV+E LL E+F GPV + KD+ + YGF+ + A AI
Sbjct: 26 TAYVGNLDPQVSEELLWELFVQAGPVVNV-YVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
Query: 113 SLNGRHLFGQPIKVNWAYASGQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPS-CSDA 171
+N LFG+PI+VN A + D N+F+G+L P+V + L FS + ++
Sbjct: 85 IMNMIKLFGKPIRVNKASQDKKSLDVGA--NLFIGNLDPDVDEKLLHDTFSAFGVIVTNP 142
Query: 172 RVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSS 231
++M D +TG SRGFGF+S+ + + +AI + G++L +RQI ++A K E + +
Sbjct: 143 KIMRDPETGNSRGFGFISYDSFDASDAAIEAMNGQYLCNRQITVSYAYKKDTKGE-RHGT 201
Query: 232 DAKSVVELTNGSSEDGKETT 251
A+ V+ +N SS+ + T
Sbjct: 202 PAERVLAASNPSSQKSRPHT 221
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 90/202 (44%), Gaps = 44/202 (21%)
Query: 145 FVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLT 204
+VG+L P+V++ L+ F + V D+ T +G+GFV FR+++DA AI +
Sbjct: 28 YVGNLDPQVSEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKIMN 87
Query: 205 GKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTT 264
L + IR N A+ +DK+S D +
Sbjct: 88 MIKLFGKPIRVNKAS------QDKKSLDVGA----------------------------N 113
Query: 265 VYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRD------KGFGFVRYSTHAEAALAIQ 318
+++GNL P+V + LH F + G ++ ++ RD +GFGF+ Y + + AI+
Sbjct: 114 LFIGNLDPDVDEKLLHDTFSAFGV-IVTNPKIMRDPETGNSRGFGFISYDSFDASDAAIE 172
Query: 319 MGNTTQSSYLFGKQMKCSWGSK 340
N YL +Q+ S+ K
Sbjct: 173 AMN---GQYLCNRQITVSYAYK 191
Score = 45.4 bits (106), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 47/86 (54%), Gaps = 11/86 (12%)
Query: 261 QYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDK------GFGFVRYSTHAEAA 314
Q T YVGNL P+V++ L F + AG + V V +D+ G+GFV + + +A
Sbjct: 23 QDATAYVGNLDPQVSEELLWELF--VQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDAD 80
Query: 315 LAIQMGNTTQSSYLFGKQMKCSWGSK 340
AI++ N + LFGK ++ + S+
Sbjct: 81 YAIKIMNMIK---LFGKPIRVNKASQ 103
>gi|395829049|ref|XP_003787673.1| PREDICTED: polyadenylate-binding protein 1-like [Otolemur
garnettii]
Length = 611
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 84/279 (30%), Positives = 131/279 (46%), Gaps = 43/279 (15%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIR----KDKSSYGFIHYFDRRSAAMAILS 113
S+YVG++H VTE LL E FS GP+ ++ R + Y +I++ A A+ +
Sbjct: 12 SLYVGDLHADVTEALLYEKFSPVGPILSIRVCRDVATRRSLGYAYINFQQPADAERALDT 71
Query: 114 LNGRHLFGQPIKVNWAYAS-GQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDAR 172
+N + GQPI++ W+ G R+ SG NIF+ +L + + L+ FS + + +
Sbjct: 72 MNFEMIKGQPIRIMWSQRDPGLRK--SGVGNIFIKNLEASIDNKALYDTFSTFGNILSCK 129
Query: 173 VMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSSD 232
V D+ SRGFGFV F + AQ AIN + G L ++ G+ + ++ +
Sbjct: 130 VACDEHG--SRGFGFVHFETHEAAQHAINTMNGMLLNDHKV-------FVGHFKSRRERE 180
Query: 233 AKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIE 292
VEL + E +T +YV NL +V + L F G +
Sbjct: 181 ----VELGARAME----------------FTNIYVKNLQADVDEQGLQELFSQFGKML-- 218
Query: 293 EVRVQRD-----KGFGFVRYSTHAEAALAIQMGNTTQSS 326
V+V RD +GFGFV + TH EA A+ N + S
Sbjct: 219 SVKVMRDSSGHSRGFGFVNFETHEEAQKAVVHMNGKEVS 257
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 122/282 (43%), Gaps = 27/282 (9%)
Query: 49 PGFDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRRS 106
PG S ++++ N+ + L + FS+ G + CK+ + S +GF+H+ +
Sbjct: 91 PGLRKSGVGNIFIKNLEASIDNKALYDTFSTFGNILSCKVACDEHGSRGFGFVHFETHEA 150
Query: 107 AAMAILSLNGRHLFGQPIKVNWAYASGQREDTSG-----HFNIFVGDLSPEVTDATLFAC 161
A AI ++NG L + V + +RE G NI+V +L +V + L
Sbjct: 151 AQHAINTMNGMLLNDHKVFVGHFKSRREREVELGARAMEFTNIYVKNLQADVDEQGLQEL 210
Query: 162 FSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKG 221
FS + +VM D +G SRGFGFV+F ++AQ A+ + GK + R + A K
Sbjct: 211 FSQFGKMLSVKVMRD-SSGHSRGFGFVNFETHEEAQKAVVHMNGKEVSGRLLYVGRAQKR 269
Query: 222 AGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHR 281
++Q+ + ++ N Q +YV NL + L +
Sbjct: 270 V----ERQNELKRRFEQMKQDRM-------------NRYQGVNLYVKNLDDSIDDEKLRK 312
Query: 282 HFHSLGAGVIEEVRVQ--RDKGFGFVRYSTHAEAALAIQMGN 321
F G +V + KGFGFV +S+ EA A+ N
Sbjct: 313 EFSPYGMITSAKVMTEGGHSKGFGFVCFSSPEEATKAVTEMN 354
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 88/181 (48%), Gaps = 20/181 (11%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDK---SSYGFIHYFDRRSAAMAILSL 114
++YV N+ V E LQE+FS G + K++R +GF+++ A A++ +
Sbjct: 192 NIYVKNLQADVDEQGLQELFSQFGKMLSVKVMRDSSGHSRGFGFVNFETHEEAQKAVVHM 251
Query: 115 NGRHLFGQPIKVNWAYASGQREDTSGH---------------FNIFVGDLSPEVTDATLF 159
NG+ + G+ + V A +R++ N++V +L + D L
Sbjct: 252 NGKEVSGRLLYVGRAQKRVERQNELKRRFEQMKQDRMNRYQGVNLYVKNLDDSIDDEKLR 311
Query: 160 ACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT 219
FS Y + A+VM + G S+GFGFV F + ++A A+ ++ G+ +G++ + A
Sbjct: 312 KEFSPYGMITSAKVMTE--GGHSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQ 369
Query: 220 K 220
+
Sbjct: 370 R 370
>gi|187956894|gb|AAI58031.1| 1810053B01Rik protein [Mus musculus]
Length = 607
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 84/279 (30%), Positives = 136/279 (48%), Gaps = 43/279 (15%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIR----KDKSSYGFIHYFDRRSAAMAILS 113
S+YVG++H VTE +L E+FS G + ++ R + Y +I++ A A+ +
Sbjct: 12 SLYVGDLHPDVTESMLYEMFSPIGNILSIRVCRDVATRRSLGYAYINFQQPADAERALDT 71
Query: 114 LNGRHLFGQPIKVNWAYAS-GQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDAR 172
+N + GQPI++ W++ G R+ SG NIF+ +L + + L+ FS + S ++
Sbjct: 72 MNFEVIKGQPIRIMWSHRDPGLRK--SGMGNIFIKNLENSIDNKALYDTFSTFGSILSSK 129
Query: 173 VMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSSD 232
V++++ SRGFGFV F + AQ AIN + G L R++ G+ + +Q +
Sbjct: 130 VVYNEHG--SRGFGFVHFETHEAAQKAINTMNGMLLNDRKVFV-------GHFKSRQKRE 180
Query: 233 AKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIE 292
A EL G+ G +T +YV NL V + L F G ++
Sbjct: 181 A----EL--GARALG--------------FTNIYVKNLHANVDEQRLQDLFSQFGN--MQ 218
Query: 293 EVRVQRD-----KGFGFVRYSTHAEAALAIQMGNTTQSS 326
V+V RD +GFGFV + H EA A+ N + S
Sbjct: 219 SVKVMRDSNGQSRGFGFVNFEKHEEAQKAVDHMNGKEVS 257
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 129/284 (45%), Gaps = 31/284 (10%)
Query: 49 PGFDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRRS 106
PG S ++++ N+ + L + FS+ G + K++ + S +GF+H+ +
Sbjct: 91 PGLRKSGMGNIFIKNLENSIDNKALYDTFSTFGSILSSKVVYNEHGSRGFGFVHFETHEA 150
Query: 107 AAMAILSLNGRHLFGQPIKVNWAYASGQRE-----DTSGHFNIFVGDLSPEVTDATLFAC 161
A AI ++NG L + + V + +RE G NI+V +L V + L
Sbjct: 151 AQKAINTMNGMLLNDRKVFVGHFKSRQKREAELGARALGFTNIYVKNLHANVDEQRLQDL 210
Query: 162 FSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKG 221
FS + + +VM D G+SRGFGFV+F ++AQ A++ + GK + + + A K
Sbjct: 211 FSQFGNMQSVKVMRD-SNGQSRGFGFVNFEKHEEAQKAVDHMNGKEVSGQLLYVGRAQKR 269
Query: 222 AGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHR 281
A ++QS + ++ + +N Q +YV NL + L
Sbjct: 270 A----ERQSELKRRFEQM-------------KQERQNRYQGVNLYVKNLDDSINDERLKE 312
Query: 282 HFHSLGAGVIEEVRVQRD----KGFGFVRYSTHAEAALAIQMGN 321
F + GVI +V + KGFGFV +S+ EA A+ N
Sbjct: 313 VFSTY--GVITSAKVMTESSHSKGFGFVCFSSPEEATKAVTEMN 354
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 88/181 (48%), Gaps = 20/181 (11%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDK---SSYGFIHYFDRRSAAMAILSL 114
++YV N+H V E LQ++FS G ++ K++R +GF+++ A A+ +
Sbjct: 192 NIYVKNLHANVDEQRLQDLFSQFGNMQSVKVMRDSNGQSRGFGFVNFEKHEEAQKAVDHM 251
Query: 115 NGRHLFGQPIKVNWAYASGQREDTSGH---------------FNIFVGDLSPEVTDATLF 159
NG+ + GQ + V A +R+ N++V +L + D L
Sbjct: 252 NGKEVSGQLLYVGRAQKRAERQSELKRRFEQMKQERQNRYQGVNLYVKNLDDSINDERLK 311
Query: 160 ACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT 219
FS Y + A+VM + + S+GFGFV F + ++A A+ ++ G+ +G++ + A
Sbjct: 312 EVFSTYGVITSAKVMTE--SSHSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQ 369
Query: 220 K 220
+
Sbjct: 370 R 370
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 81/191 (42%), Gaps = 39/191 (20%)
Query: 137 DTSGH----FNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRN 192
DT GH +++VGDL P+VT++ L+ FS + RV D T RS G+ +++F+
Sbjct: 2 DTGGHGCSLSSLYVGDLHPDVTESMLYEMFSPIGNILSIRVCRDVATRRSLGYAYINFQQ 61
Query: 193 QQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTN 252
DA+ A++ + + + + IR W+ + G + +
Sbjct: 62 PADAERALDTMNFEVIKGQPIRIMWSHRDPGLRKSGMGN--------------------- 100
Query: 253 TEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQR--DKGFGFVRYSTH 310
+++ NL + L+ F + G+ + +V +GFGFV + TH
Sbjct: 101 ------------IFIKNLENSIDNKALYDTFSTFGSILSSKVVYNEHGSRGFGFVHFETH 148
Query: 311 AEAALAIQMGN 321
A AI N
Sbjct: 149 EAAQKAINTMN 159
Score = 42.0 bits (97), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 43/81 (53%), Gaps = 2/81 (2%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRRSAAMAILSLN 115
++YV N+ + + L+EVFS+ G + K++ + S +GF+ + A A+ +N
Sbjct: 295 NLYVKNLDDSINDERLKEVFSTYGVITSAKVMTESSHSKGFGFVCFSSPEEATKAVTEMN 354
Query: 116 GRHLFGQPIKVNWAYASGQRE 136
GR + +P+ V A +R+
Sbjct: 355 GRIVGTKPLYVALAQRKEERK 375
>gi|297841929|ref|XP_002888846.1| hypothetical protein ARALYDRAFT_339396 [Arabidopsis lyrata subsp.
lyrata]
gi|297334687|gb|EFH65105.1| hypothetical protein ARALYDRAFT_339396 [Arabidopsis lyrata subsp.
lyrata]
Length = 685
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 131/270 (48%), Gaps = 35/270 (12%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEG---CKLIRKDKSSYGFIHYFDRRSAAMAILSL 114
S+YVG++ V EP L ++F+ PV+ C+ + + Y ++++ + A+ A+ SL
Sbjct: 59 SLYVGDLDPSVDEPQLLDLFNQVAPVQTVRVCRDLTRRSLGYAYVNFANPEDASRAMDSL 118
Query: 115 NGRHLFGQPIKVNWAYASGQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVM 174
N + +PI++ + SG N+F+ +L P + + L+ FS + + +V
Sbjct: 119 NYAPIRDRPIRIMLSNRDPSTR-LSGKGNVFIKNLDPSIDNKALYETFSAFGTILSCKVA 177
Query: 175 WDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSSDAK 234
D GRS+G+GFV F ++ AQ+AI+ L G L +Q+ + +D+ S++
Sbjct: 178 MD-AVGRSKGYGFVQFEKEETAQAAIDKLNGMLLNDKQVFVGHFVR----RQDRSRSESG 232
Query: 235 SVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLG---AGVI 291
+V P++T VYV NL E+T +L + F G + V+
Sbjct: 233 AV-----------------------PRFTNVYVKNLPKEITDDELKKTFGKYGDISSAVV 269
Query: 292 EEVRVQRDKGFGFVRYSTHAEAALAIQMGN 321
+ + + FGFV + + AA+A++ N
Sbjct: 270 MKDQSGNSRSFGFVNFESPEAAAVAVEKMN 299
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 120/288 (41%), Gaps = 39/288 (13%)
Query: 52 DPSTCRS----VYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRK---DKSSYGFIHYFDR 104
DPST S V++ N+ + L E FS+ G + CK+ YGF+ +
Sbjct: 136 DPSTRLSGKGNVFIKNLDPSIDNKALYETFSAFGTILSCKVAMDAVGRSKGYGFVQFEKE 195
Query: 105 RSAAMAILSLNGRHLFGQPIKV-NWAYASGQREDTSGHF----NIFVGDLSPEVTDATLF 159
+A AI LNG L + + V ++ + SG N++V +L E+TD L
Sbjct: 196 ETAQAAIDKLNGMLLNDKQVFVGHFVRRQDRSRSESGAVPRFTNVYVKNLPKEITDDELK 255
Query: 160 ACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT 219
F Y S A VM DQ +G SR FGFV+F + + A A+ + G LG + A
Sbjct: 256 KTFGKYGDISSAVVMKDQ-SGNSRSFGFVNFESPEAAAVAVEKMNGISLGEDVLYVGRAQ 314
Query: 220 KGAGNNED---KQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQ 276
K + E+ K + S E GS+ +Y+ NL V
Sbjct: 315 KKSEREEELRRKFEQERISRFEKLQGSN--------------------LYLKNLDDSVND 354
Query: 277 LDLHRHFHSLGAGVIEEVRVQR---DKGFGFVRYSTHAEAALAIQMGN 321
L F G +V + +GFGFV YS+ EA+ A+ N
Sbjct: 355 EKLKEMFSEYGNVTSCKVMMNSQGLSRGFGFVAYSSPEEASRALSEMN 402
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 94/182 (51%), Gaps = 21/182 (11%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKS----SYGFIHYFDRRSAAMAILS 113
+VYV N+ ++T+ L++ F G + ++ KD+S S+GF+++ +AA+A+
Sbjct: 239 NVYVKNLPKEITDDELKKTFGKYGDISSA-VVMKDQSGNSRSFGFVNFESPEAAAVAVEK 297
Query: 114 LNGRHLFGQPIKVNWAYASGQREDT---------SGHF------NIFVGDLSPEVTDATL 158
+NG L + V A +RE+ F N+++ +L V D L
Sbjct: 298 MNGISLGEDVLYVGRAQKKSEREEELRRKFEQERISRFEKLQGSNLYLKNLDDSVNDEKL 357
Query: 159 FACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWA 218
FS Y + + +VM + + G SRGFGFV++ + ++A A++++ GK +G + + +A
Sbjct: 358 KEMFSEYGNVTSCKVMMNSQ-GLSRGFGFVAYSSPEEASRALSEMNGKMIGRKPLYVAFA 416
Query: 219 TK 220
+
Sbjct: 417 QR 418
Score = 43.5 bits (101), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 43/81 (53%), Gaps = 3/81 (3%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDK---SSYGFIHYFDRRSAAMAILSL 114
++Y+ N+ V + L+E+FS G V CK++ + +GF+ Y A+ A+ +
Sbjct: 342 NLYLKNLDDSVNDEKLKEMFSEYGNVTSCKVMMNSQGLSRGFGFVAYSSPEEASRALSEM 401
Query: 115 NGRHLFGQPIKVNWAYASGQR 135
NG+ + +P+ V +A +R
Sbjct: 402 NGKMIGRKPLYVAFAQRKEER 422
>gi|166157896|ref|NP_001107551.1| polyadenylate-binding protein 1-like [Mus musculus]
gi|187960776|gb|ACD43645.1| embryonic poly(A)-binding protein [Mus musculus]
Length = 607
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 84/279 (30%), Positives = 136/279 (48%), Gaps = 43/279 (15%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIR----KDKSSYGFIHYFDRRSAAMAILS 113
S+YVG++H VTE +L E+FS G + ++ R + Y +I++ A A+ +
Sbjct: 12 SLYVGDLHPDVTESMLYEMFSPIGNILSIRVCRDVATRRSLGYAYINFQQPADAERALDT 71
Query: 114 LNGRHLFGQPIKVNWAYAS-GQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDAR 172
+N + GQPI++ W++ G R+ SG NIF+ +L + + L+ FS + S ++
Sbjct: 72 MNFEVIKGQPIRIMWSHRDPGLRK--SGMGNIFIKNLENSIDNKALYDTFSTFGSILSSK 129
Query: 173 VMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSSD 232
V++++ SRGFGFV F + AQ AIN + G L R++ G+ + +Q +
Sbjct: 130 VVYNEHG--SRGFGFVHFETHEAAQKAINTMNGMLLNDRKVFV-------GHFKSRQKRE 180
Query: 233 AKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIE 292
A EL G+ G +T +YV NL V + L F G ++
Sbjct: 181 A----EL--GARALG--------------FTNIYVKNLHANVDEQRLQDLFSQFGN--MQ 218
Query: 293 EVRVQRD-----KGFGFVRYSTHAEAALAIQMGNTTQSS 326
V+V RD +GFGFV + H EA A+ N + S
Sbjct: 219 SVKVMRDSNGQSRGFGFVNFEKHEEAQKAVDHMNGKEVS 257
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 129/284 (45%), Gaps = 31/284 (10%)
Query: 49 PGFDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRRS 106
PG S ++++ N+ + L + FS+ G + K++ + S +GF+H+ +
Sbjct: 91 PGLRKSGMGNIFIKNLENSIDNKALYDTFSTFGSILSSKVVYNEHGSRGFGFVHFETHEA 150
Query: 107 AAMAILSLNGRHLFGQPIKVNWAYASGQRE-----DTSGHFNIFVGDLSPEVTDATLFAC 161
A AI ++NG L + + V + +RE G NI+V +L V + L
Sbjct: 151 AQKAINTMNGMLLNDRKVFVGHFKSRQKREAELGARALGFTNIYVKNLHANVDEQRLQDL 210
Query: 162 FSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKG 221
FS + + +VM D G+SRGFGFV+F ++AQ A++ + GK + + + A K
Sbjct: 211 FSQFGNMQSVKVMRD-SNGQSRGFGFVNFEKHEEAQKAVDHMNGKEVSGQLLYVGRAQKR 269
Query: 222 AGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHR 281
A ++QS + ++ + +N Q +YV NL + L
Sbjct: 270 A----ERQSELKRRFEQM-------------KQERQNRYQGVNLYVKNLDDSINDERLKE 312
Query: 282 HFHSLGAGVIEEVRVQRD----KGFGFVRYSTHAEAALAIQMGN 321
F + GVI +V + KGFGFV +S+ EA A+ N
Sbjct: 313 VFSTY--GVITSAKVMTESSHSKGFGFVCFSSPEEATKAVTEMN 354
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 88/181 (48%), Gaps = 20/181 (11%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDK---SSYGFIHYFDRRSAAMAILSL 114
++YV N+H V E LQ++FS G ++ K++R +GF+++ A A+ +
Sbjct: 192 NIYVKNLHANVDEQRLQDLFSQFGNMQSVKVMRDSNGQSRGFGFVNFEKHEEAQKAVDHM 251
Query: 115 NGRHLFGQPIKVNWAYASGQREDTSGH---------------FNIFVGDLSPEVTDATLF 159
NG+ + GQ + V A +R+ N++V +L + D L
Sbjct: 252 NGKEVSGQLLYVGRAQKRAERQSELKRRFEQMKQERQNRYQGVNLYVKNLDDSINDERLK 311
Query: 160 ACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT 219
FS Y + A+VM + + S+GFGFV F + ++A A+ ++ G+ +G++ + A
Sbjct: 312 EVFSTYGVITSAKVMTE--SSHSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQ 369
Query: 220 K 220
+
Sbjct: 370 R 370
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 81/191 (42%), Gaps = 39/191 (20%)
Query: 137 DTSGH----FNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRN 192
DT GH +++VGDL P+VT++ L+ FS + RV D T RS G+ +++F+
Sbjct: 2 DTGGHGCSLSSLYVGDLHPDVTESMLYEMFSPIGNILSIRVCRDVATRRSLGYAYINFQQ 61
Query: 193 QQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTN 252
DA+ A++ + + + + IR W+ + G + +
Sbjct: 62 PADAERALDTMNFEVIKGQPIRIMWSHRDPGLRKSGMGN--------------------- 100
Query: 253 TEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQR--DKGFGFVRYSTH 310
+++ NL + L+ F + G+ + +V +GFGFV + TH
Sbjct: 101 ------------IFIKNLENSIDNKALYDTFSTFGSILSSKVVYNEHGSRGFGFVHFETH 148
Query: 311 AEAALAIQMGN 321
A AI N
Sbjct: 149 EAAQKAINTMN 159
Score = 42.0 bits (97), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 43/81 (53%), Gaps = 2/81 (2%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRRSAAMAILSLN 115
++YV N+ + + L+EVFS+ G + K++ + S +GF+ + A A+ +N
Sbjct: 295 NLYVKNLDDSINDERLKEVFSTYGVITSAKVMTESSHSKGFGFVCFSSPEEATKAVTEMN 354
Query: 116 GRHLFGQPIKVNWAYASGQRE 136
GR + +P+ V A +R+
Sbjct: 355 GRIVGTKPLYVALAQRKEERK 375
>gi|432907583|ref|XP_004077665.1| PREDICTED: polyadenylate-binding protein 1-like [Oryzias latipes]
Length = 635
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 82/280 (29%), Positives = 127/280 (45%), Gaps = 33/280 (11%)
Query: 52 DPSTCRS----VYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRR 105
DPS +S +++ N+ + L + FS+ G + CK++ + S YGF+H+
Sbjct: 90 DPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETHE 149
Query: 106 SAAMAILSLNGRHLFGQPIKVNWAYASGQREDTSG-----HFNIFVGDLSPEVTDATLFA 160
+A AI +NG L + + V + +RE G N+++ + ++ D L
Sbjct: 150 AAERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAREFTNVYIKNFGEDMDDEKLKE 209
Query: 161 CFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWA-T 219
F Y RVM D TG+S+GFGFVSF +DAQ A++D+ GK L RQ+ A
Sbjct: 210 LFGNYGPALSVRVMTDD-TGKSKGFGFVSFERHEDAQKAVDDMNGKELNGRQVYVGRAQK 268
Query: 220 KGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDL 279
KG NE K+ + +T Q +YV NL + L
Sbjct: 269 KGERQNELKRKFEQMKQDRMTRY------------------QGVNLYVKNLDDGLDDERL 310
Query: 280 HRHFHSLGAGVIEEVRVQ--RDKGFGFVRYSTHAEAALAI 317
+ F G +V ++ R KGFGFV +S+ EA A+
Sbjct: 311 RKEFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAV 350
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 77/295 (26%), Positives = 134/295 (45%), Gaps = 50/295 (16%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIR----KDKSSYGFIHYFDRRSAAMAILS 113
S+YVG++H VTE +L E FS GP+ ++ R + Y ++++ A A+ +
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 114 LNGRHLFGQPIKVNWAYASGQREDT---SGHFNIFVGDLSPEVTDATLFACFSVYPSCSD 170
+N + G+P+++ W+ QR+ + SG NIF+ +L + + L+ FS + +
Sbjct: 72 MNFDVIKGRPLRIMWS----QRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 171 ARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQS 230
+V+ D+ S+G+GFV F + A+ AI + G L R++ G + ++
Sbjct: 128 CKVVCDENG--SKGYGFVHFETHEAAERAIEKMNGMLLNDRKVFV-------GRFKSRKE 178
Query: 231 SDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGV 290
+A EL + E +T VY+ N ++ L F + G +
Sbjct: 179 REA----ELGARARE----------------FTNVYIKNFGEDMDDEKLKELFGNYGPAL 218
Query: 291 IEEVRVQRD-----KGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSK 340
VRV D KGFGFV + H +A A+ N + L G+Q+ K
Sbjct: 219 --SVRVMTDDTGKSKGFGFVSFERHEDAQKAVDDMNGKE---LNGRQVYVGRAQK 268
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 87/181 (48%), Gaps = 20/181 (11%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKD---KSSYGFIHYFDRRSAAMAILSL 114
+VY+ N + + L+E+F + GP +++ D +GF+ + A A+ +
Sbjct: 192 NVYIKNFGEDMDDEKLKELFGNYGPALSVRVMTDDTGKSKGFGFVSFERHEDAQKAVDDM 251
Query: 115 NGRHLFGQPIKVNWAYASGQREDTSGH---------------FNIFVGDLSPEVTDATLF 159
NG+ L G+ + V A G+R++ N++V +L + D L
Sbjct: 252 NGKELNGRQVYVGRAQKKGERQNELKRKFEQMKQDRMTRYQGVNLYVKNLDDGLDDERLR 311
Query: 160 ACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT 219
FS + + + A+VM + GRS+GFGFV F + ++A A+ ++ G+ + ++ + A
Sbjct: 312 KEFSPFGTITSAKVMME--GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQ 369
Query: 220 K 220
+
Sbjct: 370 R 370
>gi|222628961|gb|EEE61093.1| hypothetical protein OsJ_14988 [Oryza sativa Japonica Group]
Length = 373
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 85/270 (31%), Positives = 134/270 (49%), Gaps = 37/270 (13%)
Query: 83 VEGCKLIRKDKSS----YGFIHYFDRRSAAMAILSLNGRHL--FGQPIKVNWA-YASGQ- 134
V K+IR ++ YGF+ ++ SA A+ + G + +P K+NWA Y+ G+
Sbjct: 77 VVTIKVIRNRQTGQSEGYGFVEFYSHGSAEKALQNFTGHVMPNTDRPFKLNWASYSMGEK 136
Query: 135 REDTSGHFNIFVGDLSPEVTDATLFACFS-VYPSCSDARVMWDQKTGRSRGFGFVSFRNQ 193
R + + ++IFVGDL+ +VTD L F+ Y S A+V+ D TGRSRG+GFV F +
Sbjct: 137 RSEVASDYSIFVGDLAADVTDEMLMELFANKYRSVKGAKVIIDANTGRSRGYGFVRFGDD 196
Query: 194 QDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNT 253
D A+ ++ G + +R IR AT + + S+ S DG T
Sbjct: 197 NDKSHAMTEMNGAYCSTRPIRIGPATPRRSSGDSGSSTPGHS----------DGDSTNR- 245
Query: 254 EAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEA 313
TVYVG L P V++ +L + F G + V++ K GFV++ + +A
Sbjct: 246 ----------TVYVGGLDPNVSEDELRKAFAKYGD--VASVKIPLGKQCGFVQFVSRTDA 293
Query: 314 ALAIQMGNTTQSSYLFGKQ-MKCSWGSKPT 342
A+Q N + + GKQ ++ SWG P+
Sbjct: 294 EEALQGLNGS----VIGKQAVRLSWGRSPS 319
Score = 44.7 bits (104), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Query: 54 STCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSSYGFIHYFDRRSAAMAILS 113
ST R+VYVG + V+E L++ F+ G V K+ + GF+ + R A A+
Sbjct: 242 STNRTVYVGGLDPNVSEDELRKAFAKYGDVASVKIPLGKQC--GFVQFVSRTDAEEALQG 299
Query: 114 LNGRHLFGQPIKVNW 128
LNG + Q ++++W
Sbjct: 300 LNGSVIGKQAVRLSW 314
>gi|169853086|ref|XP_001833224.1| polyadenylate-binding protein [Coprinopsis cinerea okayama7#130]
gi|116505602|gb|EAU88497.1| polyadenylate-binding protein [Coprinopsis cinerea okayama7#130]
Length = 681
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 138/293 (47%), Gaps = 45/293 (15%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIR----KDKSSYGFIHYFDRRSAAMAILS 113
S+YVG + VTE +L E+F+ GPV ++ R + Y +++Y + A+
Sbjct: 50 SLYVGELDPTVTEAMLFEIFNMIGPVASIRVCRDAVTRRSLGYAYVNYLNAADGERALEQ 109
Query: 114 LNGRHLFGQPIKVNWAYASGQREDT---SGHFNIFVGDLSPEVTDATLFACFSVYPSCSD 170
LN + +P ++ W+ QR+ +G NIF+ +L + + L F+ + +
Sbjct: 110 LNYSLIKNRPCRIMWS----QRDPALRKTGQGNIFIKNLDEAIDNKALHDTFAAFGTVLS 165
Query: 171 ARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQS 230
+V D+ TGRS+G+GFV + + A++AI + G L +++ G++ ++
Sbjct: 166 CKVATDE-TGRSKGYGFVHYETAEAAENAIKAVNGMLLNDKKVYV-------GHHISRKE 217
Query: 231 SDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQ---LDLHRHFHSLG 287
+K E Q+T +YV NL PEVTQ ++L + + ++
Sbjct: 218 RQSK--------------------LEEMRAQFTNLYVKNLDPEVTQDEFIELFKKYGNVT 257
Query: 288 AGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSK 340
+ VI + KGFGFV + TH EA A+ N + L GK++ S K
Sbjct: 258 SAVISVDEEGKSKGFGFVNFETHDEAQKAVDELNDFE---LKGKKLFVSRAQK 307
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 76/278 (27%), Positives = 129/278 (46%), Gaps = 34/278 (12%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKD---KSSYGFIHYFDRRSAAMAILSL 114
++++ N+ + L + F++ G V CK+ + YGF+HY +A AI ++
Sbjct: 138 NIFIKNLDEAIDNKALHDTFAAFGTVLSCKVATDETGRSKGYGFVHYETAEAAENAIKAV 197
Query: 115 NGRHLFGQPIKVNWAYASGQR----EDTSGHF-NIFVGDLSPEVTDATLFACFSVYPSCS 169
NG L + + V + +R E+ F N++V +L PEVT F Y + +
Sbjct: 198 NGMLLNDKKVYVGHHISRKERQSKLEEMRAQFTNLYVKNLDPEVTQDEFIELFKKYGNVT 257
Query: 170 DARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQ 229
A + D++ G+S+GFGFV+F +AQ A+++L L +++ + A K A E+ +
Sbjct: 258 SAVISVDEE-GKSKGFGFVNFETHDEAQKAVDELNDFELKGKKLFVSRAQKKAEREEELR 316
Query: 230 SSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAG 289
S ++ +E + Q +Y+ NL +V L F G
Sbjct: 317 RSYEQAKLEKLSKY-----------------QGVNLYIKNLEDDVDDDKLRAEFEPF--G 357
Query: 290 VIEEVRVQRD-----KGFGFVRYSTHAEAALAI-QMGN 321
I +V RD KGFGFV +S+ EA A+ +M N
Sbjct: 358 TITSCKVMRDEKGQSKGFGFVCFSSPDEATKAVAEMNN 395
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 88/182 (48%), Gaps = 21/182 (11%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS----YGFIHYFDRRSAAMAILS 113
++YV N+ +VT+ E+F G V +I D+ +GF+++ A A+
Sbjct: 231 NLYVKNLDPEVTQDEFIELFKKYGNVTSA-VISVDEEGKSKGFGFVNFETHDEAQKAVDE 289
Query: 114 LNGRHLFGQPIKVNWAYASGQREDTSGH---------------FNIFVGDLSPEVTDATL 158
LN L G+ + V+ A +RE+ N+++ +L +V D L
Sbjct: 290 LNDFELKGKKLFVSRAQKKAEREEELRRSYEQAKLEKLSKYQGVNLYIKNLEDDVDDDKL 349
Query: 159 FACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWA 218
A F + + + +VM D+K G+S+GFGFV F + +A A+ ++ K +G++ + + A
Sbjct: 350 RAEFEPFGTITSCKVMRDEK-GQSKGFGFVCFSSPDEATKAVAEMNNKMIGTKPLYVSLA 408
Query: 219 TK 220
+
Sbjct: 409 QR 410
>gi|145491019|ref|XP_001431509.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|145522722|ref|XP_001447205.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124398614|emb|CAK64111.1| unnamed protein product [Paramecium tetraurelia]
gi|124414705|emb|CAK79808.1| unnamed protein product [Paramecium tetraurelia]
Length = 260
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 106/188 (56%), Gaps = 8/188 (4%)
Query: 44 SGNLPPGFDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS-----YGF 98
+G +PP ++ + ++Y+GN+ +VT+ ++ E+F GPV I KDK S YGF
Sbjct: 6 AGVVPPLYERNQEATIYIGNLDQKVTDDIVWELFIQCGPVVNVH-IPKDKISGEHQGYGF 64
Query: 99 IHYFDRRSAAMAILSLNGRHLFGQPIKVNWAYASGQREDTSGHFNIFVGDLSPEVTDATL 158
+ + A AI ++ L+G+PIKVN A + ++ N+F+G+L E+ + TL
Sbjct: 65 VEFKSEEDADYAIKIMHMIKLYGKPIKVNKASQDKRTQEVGA--NLFIGNLDTEIDEKTL 122
Query: 159 FACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWA 218
+ FS + ++M + +TG S+G+GFVS+ N + + A+ + G++LG++ IR +A
Sbjct: 123 YETFSAFGHILSTKIMRNPETGVSKGYGFVSYDNFESSDGALTAMNGQFLGTKIIRVEYA 182
Query: 219 TKGAGNNE 226
K E
Sbjct: 183 FKKDAKGE 190
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 51/85 (60%), Gaps = 7/85 (8%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS----YGFIHYFDRRSAAMAILS 113
++++GN+ T++ E L E FS+ G + K++R ++ YGF+ Y + S+ A+ +
Sbjct: 107 NLFIGNLDTEIDEKTLYETFSAFGHILSTKIMRNPETGVSKGYGFVSYDNFESSDGALTA 166
Query: 114 LNGRHLFGQPIKVNWAY---ASGQR 135
+NG+ L + I+V +A+ A G+R
Sbjct: 167 MNGQFLGTKIIRVEYAFKKDAKGER 191
>gi|449664731|ref|XP_002156267.2| PREDICTED: nucleolysin TIA-1 isoform p40-like [Hydra
magnipapillata]
Length = 361
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 87/293 (29%), Positives = 128/293 (43%), Gaps = 51/293 (17%)
Query: 47 LPPGFDPSTCRSV-YVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSSYGFIHYFDRR 105
+ P P T ++ YVGN+ +VT+ ++ + + G H D+
Sbjct: 1 MEPSDVPDTSATILYVGNLDKRVTDVMMLNILRA-----------------GLPHVKDK- 42
Query: 106 SAAMAILSLNGRHLFGQPIKVNWAYASGQREDTSGHFNIFVGDLSPEVTDATLFACFSVY 165
ILS +F Y S + + IFVGDL ++TD+ L F +
Sbjct: 43 -----ILSAK---MFSTADINTCVYNSMENKKIKASITIFVGDLDDDLTDSELRQAFEPF 94
Query: 166 PSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNN 225
+A+V+ D T +S+ +GF+SF N+ DA+ AI D+ G L R I+ NWAT+ N
Sbjct: 95 GEILNAKVVRDAATEKSKNYGFISFTNKPDAERAIRDMHGAMLKRRPIKTNWATR--NQN 152
Query: 226 EDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHS 285
D V + E E+N TVYV NL ++ L +HF
Sbjct: 153 SKPSQLDYDQVFK---------------EVSESN---CTVYVTNLPDRISDEVLVKHFED 194
Query: 286 LGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWG 338
G ++ RV K F F+R+ +HA A AI GN S L G +KC WG
Sbjct: 195 CGK-IVGTPRVFDGKNFAFIRFESHAAATTAIVKGN---GSELNGAILKCWWG 243
>gi|297735183|emb|CBI17545.3| unnamed protein product [Vitis vinifera]
Length = 238
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/193 (35%), Positives = 108/193 (55%), Gaps = 10/193 (5%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS-----YGFIHYFDRRSAAMAIL 112
+ YVGN+ QVTE LL E+F GPV + KD+ + YGF+ + A AI
Sbjct: 26 TAYVGNLDPQVTEELLWELFVQAGPVVNV-YVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
Query: 113 SLNGRHLFGQPIKVNWAYASGQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPS-CSDA 171
LN L+G+PI+VN A + D N+FVG+L P+V + L+ FS + ++
Sbjct: 85 VLNMIKLYGKPIRVNKASQDKKSLDVGA--NLFVGNLDPDVDEKLLYDTFSAFGVIVTNP 142
Query: 172 RVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSS 231
++M D TG SRGFGFVS+ + + + +AI + G++L +RQI ++A K E + +
Sbjct: 143 KIMRDPDTGNSRGFGFVSYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGE-RHGT 201
Query: 232 DAKSVVELTNGSS 244
A+ V+ +N S+
Sbjct: 202 PAERVLAASNPSA 214
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 90/202 (44%), Gaps = 44/202 (21%)
Query: 145 FVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLT 204
+VG+L P+VT+ L+ F + V D+ T +G+GFV FR+++DA AI L
Sbjct: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
Query: 205 GKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTT 264
L + IR N A+ +DK+S D +
Sbjct: 88 MIKLYGKPIRVNKAS------QDKKSLDVGA----------------------------N 113
Query: 265 VYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRD------KGFGFVRYSTHAEAALAIQ 318
++VGNL P+V + L+ F + G ++ ++ RD +GFGFV Y + + AI+
Sbjct: 114 LFVGNLDPDVDEKLLYDTFSAFGV-IVTNPKIMRDPDTGNSRGFGFVSYDSFEASDAAIE 172
Query: 319 MGNTTQSSYLFGKQMKCSWGSK 340
N YL +Q+ S+ K
Sbjct: 173 AMN---GQYLCNRQITVSYAYK 191
Score = 43.5 bits (101), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 47/86 (54%), Gaps = 11/86 (12%)
Query: 261 QYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDK------GFGFVRYSTHAEAA 314
Q T YVGNL P+VT+ L F + AG + V V +D+ G+GFV + + +A
Sbjct: 23 QDATAYVGNLDPQVTEELLWELF--VQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDAD 80
Query: 315 LAIQMGNTTQSSYLFGKQMKCSWGSK 340
AI++ N + L+GK ++ + S+
Sbjct: 81 YAIKVLNMIK---LYGKPIRVNKASQ 103
>gi|47217896|emb|CAG05018.1| unnamed protein product [Tetraodon nigroviridis]
Length = 558
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 83/284 (29%), Positives = 129/284 (45%), Gaps = 33/284 (11%)
Query: 52 DPSTCRS----VYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRR 105
DPS +S +++ N+ + L + FS+ G + CK++ + S YGF+H+
Sbjct: 77 DPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETHE 136
Query: 106 SAAMAILSLNGRHLFGQPIKVNWAYASGQREDTSG-----HFNIFVGDLSPEVTDATLFA 160
+A AI +NG L + + V + +RE G N+++ + ++ D L
Sbjct: 137 AAERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAREFTNVYIKNFGEDMDDEKLKE 196
Query: 161 CFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWA-T 219
FS Y RVM D +G+S+GFGFVSF +DAQ A++D+ GK L RQ+ A
Sbjct: 197 LFSKYGPALSIRVMTDD-SGKSKGFGFVSFERHEDAQKAVDDMNGKELNGRQVYVGRAQK 255
Query: 220 KGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDL 279
KG NE K+ + +T Q +YV NL + L
Sbjct: 256 KGERQNELKRKFEQMKQDRMTRY------------------QGVNLYVKNLDDGLDDERL 297
Query: 280 HRHFHSLGAGVIEEVRVQ--RDKGFGFVRYSTHAEAALAIQMGN 321
+ F G +V ++ R KGFGFV +S+ EA A+ N
Sbjct: 298 RKEFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMN 341
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 120/272 (44%), Gaps = 50/272 (18%)
Query: 74 QEVFSSTGPVEGCKLIR----KDKSSYGFIHYFDRRSAAMAILSLNGRHLFGQPIKVNWA 129
Q+ FS GP+ ++ R + Y ++++ A A+ ++N + G+P+++ W+
Sbjct: 15 QQDFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGRPLRIMWS 74
Query: 130 YASGQREDT---SGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFG 186
QR+ + SG NIF+ +L + + L+ FS + + +V+ D+ S+G+G
Sbjct: 75 ----QRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG--SKGYG 128
Query: 187 FVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSED 246
FV F + A+ AI + G L R++ G + ++ +A EL + E
Sbjct: 129 FVHFETHEAAERAIEKMNGMLLNDRKV-------FVGRFKSRKEREA----ELGARARE- 176
Query: 247 GKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRD-----KG 301
+T VY+ N ++ L F G + +RV D KG
Sbjct: 177 ---------------FTNVYIKNFGEDMDDEKLKELFSKYGPAL--SIRVMTDDSGKSKG 219
Query: 302 FGFVRYSTHAEAALAIQMGNTTQSSYLFGKQM 333
FGFV + H +A A+ N + L G+Q+
Sbjct: 220 FGFVSFERHEDAQKAVDDMNGKE---LNGRQV 248
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 87/181 (48%), Gaps = 20/181 (11%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS---YGFIHYFDRRSAAMAILSL 114
+VY+ N + + L+E+FS GP +++ D +GF+ + A A+ +
Sbjct: 179 NVYIKNFGEDMDDEKLKELFSKYGPALSIRVMTDDSGKSKGFGFVSFERHEDAQKAVDDM 238
Query: 115 NGRHLFGQPIKVNWAYASGQREDTSGH---------------FNIFVGDLSPEVTDATLF 159
NG+ L G+ + V A G+R++ N++V +L + D L
Sbjct: 239 NGKELNGRQVYVGRAQKKGERQNELKRKFEQMKQDRMTRYQGVNLYVKNLDDGLDDERLR 298
Query: 160 ACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT 219
FS + + + A+VM + GRS+GFGFV F + ++A A+ ++ G+ + ++ + A
Sbjct: 299 KEFSPFGTITSAKVMME--GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQ 356
Query: 220 K 220
+
Sbjct: 357 R 357
>gi|449459840|ref|XP_004147654.1| PREDICTED: splicing factor 3B subunit 4-like [Cucumis sativus]
gi|449498825|ref|XP_004160645.1| PREDICTED: splicing factor 3B subunit 4-like [Cucumis sativus]
Length = 379
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 66/190 (34%), Positives = 106/190 (55%), Gaps = 10/190 (5%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS-----YGFIHYFDRRSAAMAIL 112
+ YVGN+ QV+E LL E+F GPV + KD+ + YGFI + A AI
Sbjct: 26 TAYVGNLDPQVSEELLWELFVQAGPVVNV-YVPKDRVTNLHQGYGFIEFRSEEDADYAIK 84
Query: 113 SLNGRHLFGQPIKVNWAYASGQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPS-CSDA 171
LN L+G+PI+VN A + D N+F+G+L P+V + L+ FS + ++
Sbjct: 85 VLNMIKLYGKPIRVNKASQDKKSLDVGA--NLFIGNLDPDVDEKLLYDTFSAFGVIVTNP 142
Query: 172 RVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSS 231
++M D TG SRGFGF+S+ + + + +AI + G++L +RQI ++A K E + +
Sbjct: 143 KIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGE-RHGT 201
Query: 232 DAKSVVELTN 241
A+ V+ +N
Sbjct: 202 PAERVLAASN 211
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 101/231 (43%), Gaps = 55/231 (23%)
Query: 116 GRHLFGQPIKVNWAYASGQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMW 175
G +L GQ +A + +D + +VG+L P+V++ L+ F + V
Sbjct: 10 GANLLGQ-------HAPERNQDATA----YVGNLDPQVSEELLWELFVQAGPVVNVYVPK 58
Query: 176 DQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSSDAKS 235
D+ T +G+GF+ FR+++DA AI L L + IR N A+ +DK+S D +
Sbjct: 59 DRVTNLHQGYGFIEFRSEEDADYAIKVLNMIKLYGKPIRVNKAS------QDKKSLDVGA 112
Query: 236 VVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVR 295
+++GNL P+V + L+ F + G ++ +
Sbjct: 113 ----------------------------NLFIGNLDPDVDEKLLYDTFSAFGV-IVTNPK 143
Query: 296 VQRD------KGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSK 340
+ RD +GFGF+ Y + + AI+ N YL +Q+ S+ K
Sbjct: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMN---GQYLCNRQITVSYAYK 191
>gi|159164100|pdb|2DH7|A Chain A, Solution Structure Of The Second Rna Binding Domain In
Nucleolysin Tiar
Length = 105
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 50/90 (55%), Positives = 70/90 (77%)
Query: 131 ASGQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSF 190
+SGQ++DTS HF++FVGDLSPE+T + + F+ + SDARV+ D TG+S+G+GFVSF
Sbjct: 5 SSGQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSF 64
Query: 191 RNQQDAQSAINDLTGKWLGSRQIRCNWATK 220
N+ DA++AI + G+WLG RQIR NWAT+
Sbjct: 65 YNKLDAENAIVHMGGQWLGGRQIRTNWATR 94
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 62/116 (53%), Gaps = 20/116 (17%)
Query: 240 TNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLG----AGVIEEVR 295
++GSS K+T+N + V+VG+L+PE+T D+ F G A V++++
Sbjct: 2 SSGSSGQKKDTSN---------HFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMA 52
Query: 296 VQRDKGFGFVRYSTHAEAALAI-QMGNTTQSSYLFGKQMKCSWGSK--PTPPGTSS 348
+ KG+GFV + +A AI MG +L G+Q++ +W ++ P P G SS
Sbjct: 53 TGKSKGYGFVSFYNKLDAENAIVHMGG----QWLGGRQIRTNWATRKPPAPSGPSS 104
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 44/82 (53%), Gaps = 4/82 (4%)
Query: 52 DPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRK----DKSSYGFIHYFDRRSA 107
D S V+VG++ ++T ++ F+ G + ++++ YGF+ ++++ A
Sbjct: 11 DTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDA 70
Query: 108 AMAILSLNGRHLFGQPIKVNWA 129
AI+ + G+ L G+ I+ NWA
Sbjct: 71 ENAIVHMGGQWLGGRQIRTNWA 92
>gi|297802580|ref|XP_002869174.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297315010|gb|EFH45433.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 625
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 83/275 (30%), Positives = 130/275 (47%), Gaps = 46/275 (16%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIR----KDKSSYGFIHYFDRRSAAMAILS 113
S+YVG++ VT+ L + FS GPV ++ R + YG++++ + + AA AI
Sbjct: 37 SLYVGDLDVNVTDSQLFDAFSQMGPVVSVRVCRDLATRRSLGYGYVNFTNPQDAARAIQE 96
Query: 114 LNGRHLFGQPIKVNWAYA--SGQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDA 171
LN L+G+PI+V +++ S +R SG NIF+ +L + L FSV+ +
Sbjct: 97 LNYIPLYGKPIRVMYSHRDPSVRR---SGAGNIFIKNLDESIDHKALHDTFSVFGNIVSC 153
Query: 172 RVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSS 231
+V D +G+S+G+GFV + N++ AQ AI L G L +Q+ + +Q
Sbjct: 154 KVAVD-SSGQSKGYGFVQYANEESAQKAIEKLNGMLLNDKQVYVGPFLR-------RQER 205
Query: 232 DAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVI 291
D+ + N ++T VYV NLA T DL F G I
Sbjct: 206 DSTA----------------------NKTKFTNVYVKNLAESTTDDDLKNAFGEYGK--I 241
Query: 292 EEVRVQRD-----KGFGFVRYSTHAEAALAIQMGN 321
V +D KGFGFV + +AA A++ N
Sbjct: 242 TSAVVMKDGDGKSKGFGFVNFENADDAARAVESLN 276
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 83/282 (29%), Positives = 124/282 (43%), Gaps = 37/282 (13%)
Query: 52 DPSTCRS----VYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS----YGFIHYFD 103
DPS RS +++ N+ + L + FS G + CK + D S YGF+ Y +
Sbjct: 115 DPSVRRSGAGNIFIKNLDESIDHKALHDTFSVFGNIVSCK-VAVDSSGQSKGYGFVQYAN 173
Query: 104 RRSAAMAILSLNGRHLFGQPIKVNWAYASGQREDTSGHF---NIFVGDLSPEVTDATLFA 160
SA AI LNG L + + V +R+ T+ N++V +L+ TD L
Sbjct: 174 EESAQKAIEKLNGMLLNDKQVYVGPFLRRQERDSTANKTKFTNVYVKNLAESTTDDDLKN 233
Query: 161 CFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATK 220
F Y + A VM D G+S+GFGFV+F N DA A+ L G ++ W
Sbjct: 234 AFGEYGKITSAVVMKD-GDGKSKGFGFVNFENADDAARAVESLNGHKFDDKE----WYVG 288
Query: 221 GAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLH 280
A ++++ EL ++ KE + Q + +YV NL P ++ L
Sbjct: 289 RAQKKSERET-------ELRVRYEQNLKEAADKF------QSSNLYVKNLDPSISDEKLK 335
Query: 281 RHFHSLGAGVIEEVRVQRD-----KGFGFVRYSTHAEAALAI 317
F G + +V RD KG GFV +ST EA A+
Sbjct: 336 EIFSPF--GTVTSCKVMRDPNGTSKGSGFVAFSTPEEATEAM 375
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 49/101 (48%), Gaps = 6/101 (5%)
Query: 46 NLPPGFDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS---YGFIHYF 102
NL D ++YV N+ +++ L+E+FS G V CK++R + GF+ +
Sbjct: 307 NLKEAADKFQSSNLYVKNLDPSISDEKLKEIFSPFGTVTSCKVMRDPNGTSKGSGFVAFS 366
Query: 103 DRRSAAMAILSLNGRHLFGQPIKVNWAYASGQREDTSGHFN 143
A A+ L+G+ + +P+ V A ++ED F+
Sbjct: 367 TPEEATEAMSQLSGKMIESKPLYVAIAQ---RKEDRRAQFS 404
>gi|348529271|ref|XP_003452137.1| PREDICTED: polyadenylate-binding protein 1-like [Oreochromis
niloticus]
Length = 635
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 81/280 (28%), Positives = 129/280 (46%), Gaps = 33/280 (11%)
Query: 52 DPSTCRS----VYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRR 105
DPS +S +++ N+ + L + FS+ G + CK++ + S YGF+H+
Sbjct: 90 DPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETHE 149
Query: 106 SAAMAILSLNGRHLFGQPIKVNWAYASGQREDTSG-----HFNIFVGDLSPEVTDATLFA 160
+A AI +NG L + + V + +RE G N+++ + ++ D L
Sbjct: 150 AAERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAREFTNVYIKNFGEDMDDEKLKE 209
Query: 161 CFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWA-T 219
FS Y RVM D+ +G+S+GFGFVSF +DAQ A++++ GK L RQ+ A
Sbjct: 210 LFSKYGPALSIRVMTDE-SGKSKGFGFVSFERHEDAQKAVDEMNGKELNGRQVYVGRAQK 268
Query: 220 KGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDL 279
KG NE K+ + +T Q +YV NL + L
Sbjct: 269 KGERQNELKRKFEQMKQDRMTRY------------------QGVNLYVKNLDDGLDDERL 310
Query: 280 HRHFHSLGAGVIEEVRVQ--RDKGFGFVRYSTHAEAALAI 317
+ F G +V ++ R KGFGFV +S+ EA A+
Sbjct: 311 RKEFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAV 350
Score = 101 bits (251), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 76/295 (25%), Positives = 133/295 (45%), Gaps = 50/295 (16%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIR----KDKSSYGFIHYFDRRSAAMAILS 113
S+YVG++H VTE +L E FS GP+ ++ R + Y ++++ A A+ +
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 114 LNGRHLFGQPIKVNWAYASGQREDT---SGHFNIFVGDLSPEVTDATLFACFSVYPSCSD 170
+N + G+P+++ W+ QR+ + SG NIF+ +L + + L+ FS + +
Sbjct: 72 MNFDVIKGRPLRIMWS----QRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 171 ARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQS 230
+V+ D+ S+G+GFV F + A+ AI + G L R++ G + ++
Sbjct: 128 CKVVCDENG--SKGYGFVHFETHEAAERAIEKMNGMLLNDRKVFV-------GRFKSRKE 178
Query: 231 SDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGV 290
+A EL + E +T VY+ N ++ L F G +
Sbjct: 179 REA----ELGARARE----------------FTNVYIKNFGEDMDDEKLKELFSKYGPAL 218
Query: 291 IEEVRVQRD-----KGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSK 340
+RV D KGFGFV + H +A A+ N + L G+Q+ K
Sbjct: 219 --SIRVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKE---LNGRQVYVGRAQK 268
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 87/181 (48%), Gaps = 20/181 (11%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS---YGFIHYFDRRSAAMAILSL 114
+VY+ N + + L+E+FS GP +++ + +GF+ + A A+ +
Sbjct: 192 NVYIKNFGEDMDDEKLKELFSKYGPALSIRVMTDESGKSKGFGFVSFERHEDAQKAVDEM 251
Query: 115 NGRHLFGQPIKVNWAYASGQREDTSGH---------------FNIFVGDLSPEVTDATLF 159
NG+ L G+ + V A G+R++ N++V +L + D L
Sbjct: 252 NGKELNGRQVYVGRAQKKGERQNELKRKFEQMKQDRMTRYQGVNLYVKNLDDGLDDERLR 311
Query: 160 ACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT 219
FS + + + A+VM + GRS+GFGFV F + ++A A+ ++ G+ + ++ + A
Sbjct: 312 KEFSPFGTITSAKVMME--GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQ 369
Query: 220 K 220
+
Sbjct: 370 R 370
>gi|366987097|ref|XP_003673315.1| hypothetical protein NCAS_0A03680 [Naumovozyma castellii CBS 4309]
gi|342299178|emb|CCC66926.1| hypothetical protein NCAS_0A03680 [Naumovozyma castellii CBS 4309]
Length = 575
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/275 (28%), Positives = 132/275 (48%), Gaps = 38/275 (13%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIR----KDKSSYGFIHYFDRRSAAMAILS 113
S+YVG + V+E LL ++FS G V ++ R K Y ++++ D + AI
Sbjct: 36 SLYVGELDPTVSEALLYDIFSPIGSVSSIRVCRDAVTKTSLGYAYVNFNDHEAGKKAIEQ 95
Query: 114 LNGRHLFGQPIKVNWAYAS-GQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDAR 172
LN + G+ ++ W+ R+ SG NIF+ +L P++ + LF FSV+ + ++
Sbjct: 96 LNYTPIKGRLCRIMWSQRDPALRKKGSG--NIFIKNLHPDIDNKALFETFSVFGNILSSK 153
Query: 173 VMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSSD 232
+ D+ TG+S+GFGFV F ++ A+ AI+ L G L ++I
Sbjct: 154 IATDE-TGKSKGFGFVHFEHESSAKEAIDALNGMLLNGQEIYV----------------- 195
Query: 233 AKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLG---AG 289
LT ++ +++ E +T VYV N+ E T + + F G +
Sbjct: 196 ---APHLT-------RKERDSQLEETKAHFTNVYVKNINLETTDEEFNELFAKYGNVLSS 245
Query: 290 VIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQ 324
+E+ + KGFGFV + H +AA A++ N T+
Sbjct: 246 SLEKTEDGKLKGFGFVDFEKHEDAAKAVEELNGTE 280
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 75/163 (46%), Gaps = 19/163 (11%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS---YGFIHYFDRRSAAMAILSL 114
+VYV NI+ + T+ E+F+ G V L + + +GF+ + AA A+ L
Sbjct: 217 NVYVKNINLETTDEEFNELFAKYGNVLSSSLEKTEDGKLKGFGFVDFEKHEDAAKAVEEL 276
Query: 115 NGRHLFGQPIKVNWA-------------YASGQREDTSGH--FNIFVGDLSPEVTDATLF 159
NG Q + V+ A Y + + E + + N+FV +L + D L
Sbjct: 277 NGTEFKDQTLFVSRAQKKYERMQELKKQYEASRLEKMAKYQGVNLFVKNLDDSIDDEKLK 336
Query: 160 ACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAIND 202
F+ Y + + RVM G+S+GFGFV F ++A AI +
Sbjct: 337 EEFAPYGTITSVRVMRTD-NGKSKGFGFVCFSTPEEATKAITE 378
>gi|148674413|gb|EDL06360.1| mCG5434 [Mus musculus]
Length = 534
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 84/279 (30%), Positives = 136/279 (48%), Gaps = 43/279 (15%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIR----KDKSSYGFIHYFDRRSAAMAILS 113
S+YVG++H VTE +L E+FS G + ++ R + Y +I++ A A+ +
Sbjct: 12 SLYVGDLHPDVTESMLYEMFSPIGNILSIRVCRDVATRRSLGYAYINFQQPADAERALDT 71
Query: 114 LNGRHLFGQPIKVNWAYAS-GQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDAR 172
+N + GQPI++ W++ G R+ SG NIF+ +L + + L+ FS + S ++
Sbjct: 72 MNFEVIKGQPIRIMWSHRDPGLRK--SGMGNIFIKNLENSIDNKALYDTFSTFGSILSSK 129
Query: 173 VMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSSD 232
V++++ SRGFGFV F + AQ AIN + G L R++ G+ + +Q +
Sbjct: 130 VVYNEHG--SRGFGFVHFETHEAAQKAINTMNGMLLNDRKVFV-------GHFKSRQKRE 180
Query: 233 AKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIE 292
A EL G+ G +T +YV NL V + L F G ++
Sbjct: 181 A----EL--GARALG--------------FTNIYVKNLHANVDEQRLQDLFSQFGN--MQ 218
Query: 293 EVRVQRD-----KGFGFVRYSTHAEAALAIQMGNTTQSS 326
V+V RD +GFGFV + H EA A+ N + S
Sbjct: 219 SVKVMRDSNGQSRGFGFVNFEKHEEAQKAVDHMNGKEVS 257
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 75/280 (26%), Positives = 128/280 (45%), Gaps = 31/280 (11%)
Query: 49 PGFDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRRS 106
PG S ++++ N+ + L + FS+ G + K++ + S +GF+H+ +
Sbjct: 91 PGLRKSGMGNIFIKNLENSIDNKALYDTFSTFGSILSSKVVYNEHGSRGFGFVHFETHEA 150
Query: 107 AAMAILSLNGRHLFGQPIKVNWAYASGQRE-----DTSGHFNIFVGDLSPEVTDATLFAC 161
A AI ++NG L + + V + +RE G NI+V +L V + L
Sbjct: 151 AQKAINTMNGMLLNDRKVFVGHFKSRQKREAELGARALGFTNIYVKNLHANVDEQRLQDL 210
Query: 162 FSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKG 221
FS + + +VM D G+SRGFGFV+F ++AQ A++ + GK + + + A K
Sbjct: 211 FSQFGNMQSVKVMRD-SNGQSRGFGFVNFEKHEEAQKAVDHMNGKEVSGQLLYVGRAQKR 269
Query: 222 AGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHR 281
A ++QS + ++ + +N Q +YV NL + L
Sbjct: 270 A----ERQSELKRRFEQM-------------KQERQNRYQGVNLYVKNLDDSINDERLKE 312
Query: 282 HFHSLGAGVIEEVRVQRD----KGFGFVRYSTHAEAALAI 317
F + GVI +V + KGFGFV +S+ EA A+
Sbjct: 313 VFSTY--GVITSAKVMTESSHSKGFGFVCFSSPEEATKAV 350
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 90/181 (49%), Gaps = 20/181 (11%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDK---SSYGFIHYFDRRSAAMAILSL 114
++YV N+H V E LQ++FS G ++ K++R +GF+++ A A+ +
Sbjct: 192 NIYVKNLHANVDEQRLQDLFSQFGNMQSVKVMRDSNGQSRGFGFVNFEKHEEAQKAVDHM 251
Query: 115 NGRHLFGQPIKVNWAYASGQRE-DTSGHF--------------NIFVGDLSPEVTDATLF 159
NG+ + GQ + V A +R+ + F N++V +L + D L
Sbjct: 252 NGKEVSGQLLYVGRAQKRAERQSELKRRFEQMKQERQNRYQGVNLYVKNLDDSINDERLK 311
Query: 160 ACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT 219
FS Y + A+VM + + S+GFGFV F + ++A A+ ++ G+ +G++ + A
Sbjct: 312 EVFSTYGVITSAKVMTE--SSHSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQ 369
Query: 220 K 220
+
Sbjct: 370 R 370
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 81/191 (42%), Gaps = 39/191 (20%)
Query: 137 DTSGH----FNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRN 192
DT GH +++VGDL P+VT++ L+ FS + RV D T RS G+ +++F+
Sbjct: 2 DTGGHGCSLSSLYVGDLHPDVTESMLYEMFSPIGNILSIRVCRDVATRRSLGYAYINFQQ 61
Query: 193 QQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTN 252
DA+ A++ + + + + IR W+ + G + +
Sbjct: 62 PADAERALDTMNFEVIKGQPIRIMWSHRDPGLRKSGMGN--------------------- 100
Query: 253 TEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQR--DKGFGFVRYSTH 310
+++ NL + L+ F + G+ + +V +GFGFV + TH
Sbjct: 101 ------------IFIKNLENSIDNKALYDTFSTFGSILSSKVVYNEHGSRGFGFVHFETH 148
Query: 311 AEAALAIQMGN 321
A AI N
Sbjct: 149 EAAQKAINTMN 159
Score = 42.0 bits (97), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 43/81 (53%), Gaps = 2/81 (2%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRRSAAMAILSLN 115
++YV N+ + + L+EVFS+ G + K++ + S +GF+ + A A+ +N
Sbjct: 295 NLYVKNLDDSINDERLKEVFSTYGVITSAKVMTESSHSKGFGFVCFSSPEEATKAVTEMN 354
Query: 116 GRHLFGQPIKVNWAYASGQRE 136
GR + +P+ V A +R+
Sbjct: 355 GRIVGTKPLYVALAQRKEERK 375
>gi|119489215|ref|XP_001262859.1| mRNA binding post-transcriptional regulator (Csx1), putative
[Neosartorya fischeri NRRL 181]
gi|119411017|gb|EAW20962.1| mRNA binding post-transcriptional regulator (Csx1), putative
[Neosartorya fischeri NRRL 181]
Length = 417
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 92/298 (30%), Positives = 146/298 (48%), Gaps = 25/298 (8%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRK----DKSSYGFIHYFDRRSAAMAILS 113
++++G + + E ++ ++ G K+IR + Y F+ F +AA LS
Sbjct: 67 TLWMGELEPWIDENFIRNLWFQMGEQVNVKMIRDKFSGSNAGYCFVD-FASPAAAAKALS 125
Query: 114 LNGRHL--FGQPIKVNWAYASG----QREDTSGHFNIFVGDLSPEVTDATLFACF-SVYP 166
LNG + + K+NWA G R+D ++IFVGDL PEV + L + F + +P
Sbjct: 126 LNGTPMPNTNRVFKLNWATGGGLADRSRDDRGPEYSIFVGDLGPEVNEYVLVSLFQNRFP 185
Query: 167 SCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT---KGAG 223
SC A++M D +G SRG+GFV F ++ D Q A+ ++ G + G+R +R + AT KG G
Sbjct: 186 SCKSAKIMTDPISGMSRGYGFVRFSDENDQQRALTEMQGVYCGNRPMRISTATPKNKGPG 245
Query: 224 NNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPEN---NPQYTTVYVGNLAPEVTQLDLH 280
+ + G+ G P N +P TTV+VG L+ VT+ +L
Sbjct: 246 VVPGAMGMPGPAGMYPPMGAPPMG--FYGAPQPMNQFTDPNNTTVFVGGLSGYVTEDELR 303
Query: 281 RHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWG 338
F G G I V++ KG GFV++ A +AI N Q + +++ SWG
Sbjct: 304 SFFQ--GFGEITYVKIPPGKGCGFVQFVQRHAAEMAI---NQMQGYPIGNSRVRLSWG 356
>gi|410904819|ref|XP_003965889.1| PREDICTED: polyadenylate-binding protein 1-like [Takifugu rubripes]
Length = 636
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 82/280 (29%), Positives = 127/280 (45%), Gaps = 33/280 (11%)
Query: 52 DPSTCRS----VYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRR 105
DPS +S +++ N+ + L + FS+ G + CK++ + S YGF+H+
Sbjct: 90 DPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETHE 149
Query: 106 SAAMAILSLNGRHLFGQPIKVNWAYASGQREDTSG-----HFNIFVGDLSPEVTDATLFA 160
+A AI +NG L + + V + +RE G N+++ + ++ D L
Sbjct: 150 AAERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAREFTNVYIKNFGEDMDDEKLKE 209
Query: 161 CFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWA-T 219
FS Y RVM D G+S+GFGFVSF +DAQ A++D+ GK L RQ+ A
Sbjct: 210 LFSKYGPALSIRVMTDD-GGKSKGFGFVSFERHEDAQKAVDDMNGKELNGRQVYVGRAQK 268
Query: 220 KGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDL 279
KG NE K+ + +T Q +YV NL + L
Sbjct: 269 KGERQNELKRKFEQMKQDRMTRY------------------QGVNLYVKNLDDGLDDERL 310
Query: 280 HRHFHSLGAGVIEEVRVQ--RDKGFGFVRYSTHAEAALAI 317
+ F G +V ++ R KGFGFV +S+ EA A+
Sbjct: 311 RKEFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAV 350
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/295 (25%), Positives = 133/295 (45%), Gaps = 50/295 (16%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIR----KDKSSYGFIHYFDRRSAAMAILS 113
S+YVG++H VTE +L E FS GP+ ++ R + Y ++++ A A+ +
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 114 LNGRHLFGQPIKVNWAYASGQREDT---SGHFNIFVGDLSPEVTDATLFACFSVYPSCSD 170
+N + G+P+++ W+ QR+ + SG NIF+ +L + + L+ FS + +
Sbjct: 72 MNFDVIKGRPLRIMWS----QRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 171 ARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQS 230
+V+ D+ S+G+GFV F + A+ AI + G L R++ G + ++
Sbjct: 128 CKVVCDENG--SKGYGFVHFETHEAAERAIEKMNGMLLNDRKVFV-------GRFKSRKE 178
Query: 231 SDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGV 290
+A EL + E +T VY+ N ++ L F G +
Sbjct: 179 REA----ELGARARE----------------FTNVYIKNFGEDMDDEKLKELFSKYGPAL 218
Query: 291 IEEVRVQRD-----KGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSK 340
+RV D KGFGFV + H +A A+ N + L G+Q+ K
Sbjct: 219 --SIRVMTDDGGKSKGFGFVSFERHEDAQKAVDDMNGKE---LNGRQVYVGRAQK 268
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 87/181 (48%), Gaps = 20/181 (11%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKD---KSSYGFIHYFDRRSAAMAILSL 114
+VY+ N + + L+E+FS GP +++ D +GF+ + A A+ +
Sbjct: 192 NVYIKNFGEDMDDEKLKELFSKYGPALSIRVMTDDGGKSKGFGFVSFERHEDAQKAVDDM 251
Query: 115 NGRHLFGQPIKVNWAYASGQREDTSGH---------------FNIFVGDLSPEVTDATLF 159
NG+ L G+ + V A G+R++ N++V +L + D L
Sbjct: 252 NGKELNGRQVYVGRAQKKGERQNELKRKFEQMKQDRMTRYQGVNLYVKNLDDGLDDERLR 311
Query: 160 ACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT 219
FS + + + A+VM + GRS+GFGFV F + ++A A+ ++ G+ + ++ + A
Sbjct: 312 KEFSPFGTITSAKVMME--GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQ 369
Query: 220 K 220
+
Sbjct: 370 R 370
>gi|297791731|ref|XP_002863750.1| hypothetical protein ARALYDRAFT_331131 [Arabidopsis lyrata subsp.
lyrata]
gi|297309585|gb|EFH40009.1| hypothetical protein ARALYDRAFT_331131 [Arabidopsis lyrata subsp.
lyrata]
Length = 400
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 85/295 (28%), Positives = 135/295 (45%), Gaps = 55/295 (18%)
Query: 57 RSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS----YGFIHYFDRRSAAMAIL 112
++++VG++ + E L FSS G + K+IR + YGF+ + A +
Sbjct: 91 KTIWVGDLLHWMDENYLNSSFSSAGEISSVKVIRNKHTGLTEGYGFVEFVSHDVAEKVLQ 150
Query: 113 SLNGRHLFG--QPIKVNWA-YASGQREDTSG-HFNIFVGDLSPEVTDATLFACFS-VYPS 167
LNG + QP ++NWA +++G++ +G +IFVGDL+PEVTD L FS YPS
Sbjct: 151 ELNGEAMLNAEQPFRLNWASFSTGEKRLENGPDLSIFVGDLAPEVTDTMLEQIFSEKYPS 210
Query: 168 CSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNED 227
+A+V+ D TGRS+G+GFV F + + A+ ++ G R +R AT +
Sbjct: 211 VKNAKVVIDGNTGRSKGYGFVRFGDDSERSKAMLEMNGVKCCGRAMRIGPATPRKPSGYH 270
Query: 228 KQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLG 287
+Q D+ VT DL + F G
Sbjct: 271 QQGLDSS---------------------------------------VTDDDLRQPF--AG 289
Query: 288 AGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQ-MKCSWGSKP 341
G I V++ KG GF+++ A A++ N + + GKQ ++ SWG P
Sbjct: 290 YGEIVSVKIPVGKGCGFIQFVNRENAEEALEKLNGS----MIGKQTVRLSWGRNP 340
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 86/176 (48%), Gaps = 19/176 (10%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGP-VEGCKLIRKDKSS----YGFIHYFDRRSAAMAIL 112
S++VG++ +VT+ +L+++FS P V+ K++ + YGF+ + D + A+L
Sbjct: 185 SIFVGDLAPEVTDTMLEQIFSEKYPSVKNAKVVIDGNTGRSKGYGFVRFGDDSERSKAML 244
Query: 113 SLNGRHLFGQPIKVNWAYASGQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDAR 172
+NG G+ +++ A R+ + H L VTD L F+ Y +
Sbjct: 245 EMNGVKCCGRAMRIGPATP---RKPSGYHQQ----GLDSSVTDDDLRQPFAGYGEIVSVK 297
Query: 173 VMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDK 228
+ +G GF+ F N+++A+ A+ L G +G + +R +W + GN + +
Sbjct: 298 I------PVGKGCGFIQFVNRENAEEALEKLNGSMIGKQTVRLSWG-RNPGNKQPR 346
>gi|189197507|ref|XP_001935091.1| mRNA binding post-transcriptional regulator (Csx1) [Pyrenophora
tritici-repentis Pt-1C-BFP]
gi|187981039|gb|EDU47665.1| mRNA binding post-transcriptional regulator (Csx1) [Pyrenophora
tritici-repentis Pt-1C-BFP]
Length = 490
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 92/321 (28%), Positives = 146/321 (45%), Gaps = 48/321 (14%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRK----DKSSYGFIHYFDRRSAAMAILS 113
++++G + + E ++ ++ + G K+IR + Y F+ + +AA A LS
Sbjct: 66 TLWMGELEPWIDENFVRSIWYNMGETVNVKMIRDKFSGSNAGYCFVDFASPDAAAKA-LS 124
Query: 114 LNGRHL--FGQPIKVNWAYASG---------------------QREDTSGHFNIFVGDLS 150
LNG + +P K+NWA G R++ F++FVGDL
Sbjct: 125 LNGSLIPNSNRPFKLNWASGGGLADRRQVSQVSKYKHMANESNSRDERGPEFSVFVGDLG 184
Query: 151 PEVTDATLFACF-SVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLG 209
PEVT+ L F + Y S A++M D +G SRG+GFV F ++ D Q A+ ++ G + G
Sbjct: 185 PEVTEFVLVQLFQNKYASTKSAKIMSDPISGMSRGYGFVRFASEDDQQKALTEMQGVYCG 244
Query: 210 SRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTN---------TEAPEN-- 258
+R +R + AT N + G G + N T P N
Sbjct: 245 NRPMRISTAT--PKNKSGGPGGPGGMGMPQGGGGPGMGMYSMNAPPMGGYYGTPQPMNQF 302
Query: 259 -NPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAI 317
+P TTV+VG L+ VT+ +L F G G I V++ KG GFV++ A +AI
Sbjct: 303 TDPNNTTVFVGGLSGYVTEDELRSFFQ--GFGEITYVKIPPGKGCGFVQFVQRHAAEMAI 360
Query: 318 QMGNTTQSSYLFGKQMKCSWG 338
N Q + +++ SWG
Sbjct: 361 ---NQMQGYPIGNSRVRLSWG 378
>gi|367008356|ref|XP_003678678.1| hypothetical protein TDEL_0A01350 [Torulaspora delbrueckii]
gi|359746335|emb|CCE89467.1| hypothetical protein TDEL_0A01350 [Torulaspora delbrueckii]
Length = 588
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 84/298 (28%), Positives = 137/298 (45%), Gaps = 43/298 (14%)
Query: 37 PQIEPIPSGNLPPGFDPSTCR-SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIR----K 91
PQ P+ N P T S+YVG + V+E LL ++FS G V ++ R K
Sbjct: 21 PQQNVAPASNEPESQKVETSSASLYVGELDPSVSEALLYDIFSPIGSVSSIRVCRDAITK 80
Query: 92 DKSSYGFIHYFDRRSAAMAILSLNGRHLFGQPIKVNWAYAS-GQREDTSGHFNIFVGDLS 150
Y ++++ D + AI LN + G P ++ W+ R+ SG NIF+ +L
Sbjct: 81 TSLGYAYVNFNDHEAGKTAIEKLNYAPIKGVPCRIMWSQRDPSMRKKGSG--NIFIKNLH 138
Query: 151 PEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGS 210
P++ + L FSV+ + ++ D+ G SRGFGFV F + + A+ AI+ + G L
Sbjct: 139 PDIDNKALHDTFSVFGNILSCKIATDE-AGNSRGFGFVHFEDDEAAKEAIDAINGMLLNG 197
Query: 211 RQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNL 270
+++ A+ V S+ +++ EA N +T VYV N+
Sbjct: 198 QEVYV-----------------AQHV-------SKKDRQSKLDEAKAN---FTNVYVKNI 230
Query: 271 APEVTQLDLHRHFHSLGAGVIEEVRVQRD-----KGFGFVRYSTHAEAALAIQMGNTT 323
P+ + F +G I +++D +GFGFV Y H +AA A++ N T
Sbjct: 231 HPDTGDEEFEEFFTKVGP--ITSAHLEKDNEGKLRGFGFVNYENHNDAAKAVEELNET 286
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 75/164 (45%), Gaps = 21/164 (12%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS---YGFIHYFDRRSAAMAILSL 114
+VYV NIH + +E F+ GP+ L + ++ +GF++Y + AA A+ L
Sbjct: 224 NVYVKNIHPDTGDEEFEEFFTKVGPITSAHLEKDNEGKLRGFGFVNYENHNDAAKAVEEL 283
Query: 115 NGRHLFGQPIKVNWAYASGQR----------------EDTSGHFNIFVGDLSPEVTDATL 158
N GQ + V A +R E G N+FV +L + D L
Sbjct: 284 NETDFKGQTLHVGRAQKKHERLQELKKQYEAFRLEKLEKYQG-VNLFVKNLDDTIDDQKL 342
Query: 159 FACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAIND 202
F+ Y + + +VM + G+S+GFGFV F ++A AI +
Sbjct: 343 EEEFAPYGTITSVKVMRSE-NGKSKGFGFVCFSTPEEATKAITE 385
>gi|392346932|ref|XP_230831.6| PREDICTED: poly(A) binding protein, cytoplasmic 1-like [Rattus
norvegicus]
Length = 609
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 82/279 (29%), Positives = 135/279 (48%), Gaps = 43/279 (15%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIR----KDKSSYGFIHYFDRRSAAMAILS 113
S+YVG++H VTE +L E+FS G + ++ R + Y +I++ A A+ +
Sbjct: 12 SLYVGDLHPDVTEAMLYEMFSPIGTILSIRVCRDVATRRSLGYAYINFQQPADAERALDT 71
Query: 114 LNGRHLFGQPIKVNWAYAS-GQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDAR 172
+N + GQPI++ W++ G R SG NIF+ +L + + L+ FS + S ++
Sbjct: 72 MNFEMIKGQPIRIMWSHRDPGLRR--SGMGNIFIKNLENSIDNKALYDTFSTFGSILSSK 129
Query: 173 VMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSSD 232
V++++ SRGFGFV F + AQ AIN + G L R++ G+ + +Q +
Sbjct: 130 VVYNEHG--SRGFGFVHFETHEAAQKAINTMNGMLLNDRKV-------FVGHFKSRQKRE 180
Query: 233 AKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIE 292
A EL G+ G +T +YV NL ++ + L F G +
Sbjct: 181 A----EL--GARALG--------------FTNIYVKNLRVDMDEQGLQDLFSQFGK--TQ 218
Query: 293 EVRVQRD-----KGFGFVRYSTHAEAALAIQMGNTTQSS 326
V+V RD +GFGF+ + H EA A+ N + S
Sbjct: 219 SVKVMRDSNGQSRGFGFINFEKHEEAQKAVDHMNGKEVS 257
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 129/284 (45%), Gaps = 31/284 (10%)
Query: 49 PGFDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRRS 106
PG S ++++ N+ + L + FS+ G + K++ + S +GF+H+ +
Sbjct: 91 PGLRRSGMGNIFIKNLENSIDNKALYDTFSTFGSILSSKVVYNEHGSRGFGFVHFETHEA 150
Query: 107 AAMAILSLNGRHLFGQPIKVNWAYASGQRE-----DTSGHFNIFVGDLSPEVTDATLFAC 161
A AI ++NG L + + V + +RE G NI+V +L ++ + L
Sbjct: 151 AQKAINTMNGMLLNDRKVFVGHFKSRQKREAELGARALGFTNIYVKNLRVDMDEQGLQDL 210
Query: 162 FSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKG 221
FS + +VM D G+SRGFGF++F ++AQ A++ + GK + + + A K
Sbjct: 211 FSQFGKTQSVKVMRD-SNGQSRGFGFINFEKHEEAQKAVDHMNGKEVSGQLLYVGRAQKR 269
Query: 222 AGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHR 281
A ++Q+ + ++ + +N Q +YV NL + L
Sbjct: 270 A----ERQNELKRRFEQM-------------KQERQNRYQGVNLYVKNLDDSINDDRLKE 312
Query: 282 HFHSLGAGVIEEVRVQRD----KGFGFVRYSTHAEAALAIQMGN 321
F + GVI +V + KGFGFV +S+ EA A+ N
Sbjct: 313 VFSTY--GVITSAKVMTESSHSKGFGFVCFSSPEEATKAVTEMN 354
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 87/181 (48%), Gaps = 20/181 (11%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDK---SSYGFIHYFDRRSAAMAILSL 114
++YV N+ + E LQ++FS G + K++R +GFI++ A A+ +
Sbjct: 192 NIYVKNLRVDMDEQGLQDLFSQFGKTQSVKVMRDSNGQSRGFGFINFEKHEEAQKAVDHM 251
Query: 115 NGRHLFGQPIKVNWAYASGQREDTSGH---------------FNIFVGDLSPEVTDATLF 159
NG+ + GQ + V A +R++ N++V +L + D L
Sbjct: 252 NGKEVSGQLLYVGRAQKRAERQNELKRRFEQMKQERQNRYQGVNLYVKNLDDSINDDRLK 311
Query: 160 ACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT 219
FS Y + A+VM + + S+GFGFV F + ++A A+ ++ G+ +G++ + A
Sbjct: 312 EVFSTYGVITSAKVMTE--SSHSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQ 369
Query: 220 K 220
+
Sbjct: 370 R 370
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 80/191 (41%), Gaps = 39/191 (20%)
Query: 137 DTSGH----FNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRN 192
DT GH +++VGDL P+VT+A L+ FS + RV D T RS G+ +++F+
Sbjct: 2 DTRGHGCSLSSLYVGDLHPDVTEAMLYEMFSPIGTILSIRVCRDVATRRSLGYAYINFQQ 61
Query: 193 QQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTN 252
DA+ A++ + + + + IR W+ + G +
Sbjct: 62 PADAERALDTMNFEMIKGQPIRIMWSHRDPGLRRSGMGN--------------------- 100
Query: 253 TEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQR--DKGFGFVRYSTH 310
+++ NL + L+ F + G+ + +V +GFGFV + TH
Sbjct: 101 ------------IFIKNLENSIDNKALYDTFSTFGSILSSKVVYNEHGSRGFGFVHFETH 148
Query: 311 AEAALAIQMGN 321
A AI N
Sbjct: 149 EAAQKAINTMN 159
Score = 42.0 bits (97), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 43/81 (53%), Gaps = 2/81 (2%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRRSAAMAILSLN 115
++YV N+ + + L+EVFS+ G + K++ + S +GF+ + A A+ +N
Sbjct: 295 NLYVKNLDDSINDDRLKEVFSTYGVITSAKVMTESSHSKGFGFVCFSSPEEATKAVTEMN 354
Query: 116 GRHLFGQPIKVNWAYASGQRE 136
GR + +P+ V A +R+
Sbjct: 355 GRIVGTKPLYVALAQRKEERK 375
>gi|116789456|gb|ABK25253.1| unknown [Picea sitchensis]
Length = 487
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 88/295 (29%), Positives = 144/295 (48%), Gaps = 28/295 (9%)
Query: 57 RSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS----YGFIHYFDRRSAAMAIL 112
R+++VG++ + E +Q F + V K+IR ++ YGF+ + A +
Sbjct: 79 RTLWVGDLQYWMDETYMQSCFGNNQEVVSVKIIRNKQTGQSEGYGFVEFASHAGAERFLQ 138
Query: 113 SLNGRHL--FGQPIKVNWA-YASGQREDTSG-HFNIFVGDLSPEVTDATLFACF-SVYPS 167
+ NG + Q ++NWA + G++ G + IFVGDL+ +VTD L F S Y +
Sbjct: 139 NHNGAQMPNTEQFYRLNWATFGIGEKRPEMGPDYPIFVGDLASDVTDYLLQETFRSRYQT 198
Query: 168 CSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNED 227
A+V+ D+ TGRS+G+GFV F ++ + A+ ++ G + SR +R AT
Sbjct: 199 VKGAKVVSDRVTGRSKGYGFVRFGDENEQVRAMTEMNGMFCSSRPMRTGPATTKKTTGFQ 258
Query: 228 KQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLG 287
+ A + V A +N+P TT++VG L P VT L + F G
Sbjct: 259 QPYPKAAAAVP------------PQVVASDNDPNNTTIFVGGLDPSVTDEMLRQLFGQFG 306
Query: 288 AGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQ-MKCSWGSKP 341
V V++ K GFV+++ A A A+QM + T + G+Q ++ SWG P
Sbjct: 307 ELV--HVKIPVGKRCGFVQFNNRASAEEALQMLHGT----VLGQQAIRLSWGRSP 355
Score = 38.1 bits (87), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 46/85 (54%), Gaps = 3/85 (3%)
Query: 52 DPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSSYGFIHYFDRRSAAMAI 111
DP+ +++VG + VT+ +L+++F G + K+ + GF+ + +R SA A+
Sbjct: 278 DPNNT-TIFVGGLDPSVTDEMLRQLFGQFGELVHVKIPVGKRC--GFVQFNNRASAEEAL 334
Query: 112 LSLNGRHLFGQPIKVNWAYASGQRE 136
L+G L Q I+++W + ++
Sbjct: 335 QMLHGTVLGQQAIRLSWGRSPANKQ 359
>gi|338762832|gb|AEI98619.1| hypothetical protein 111O18.6 [Coffea canephora]
Length = 368
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 66/200 (33%), Positives = 111/200 (55%), Gaps = 10/200 (5%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS-----YGFIHYFDRRSAAMAIL 112
+ YVGN+ QV+E LL E+F GPV + KD+ + YGF+ + A AI
Sbjct: 26 TAYVGNLDPQVSEELLWELFVQAGPVVNV-YVPKDRVTNSHQGYGFVEFRSEEDADYAIK 84
Query: 113 SLNGRHLFGQPIKVNWAYASGQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPS-CSDA 171
LN L+G+PI+VN A + D N+F+G+L P+V + L+ FS + ++
Sbjct: 85 VLNMIKLYGKPIRVNKASQDKKSVDVGA--NLFIGNLDPDVDEKLLYDTFSAFGVIVTNP 142
Query: 172 RVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSS 231
++M D +TG SRGFGF+S+ + + + +AI + G++L +RQI ++A K E + +
Sbjct: 143 KIMRDPETGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGE-RHGT 201
Query: 232 DAKSVVELTNGSSEDGKETT 251
A+ V+ +N + + + T
Sbjct: 202 PAERVLAASNPNVQKSRPHT 221
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 90/202 (44%), Gaps = 44/202 (21%)
Query: 145 FVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLT 204
+VG+L P+V++ L+ F + V D+ T +G+GFV FR+++DA AI L
Sbjct: 28 YVGNLDPQVSEELLWELFVQAGPVVNVYVPKDRVTNSHQGYGFVEFRSEEDADYAIKVLN 87
Query: 205 GKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTT 264
L + IR N A+ +DK+S D +
Sbjct: 88 MIKLYGKPIRVNKAS------QDKKSVDVGA----------------------------N 113
Query: 265 VYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRD------KGFGFVRYSTHAEAALAIQ 318
+++GNL P+V + L+ F + G ++ ++ RD +GFGF+ Y + + AI+
Sbjct: 114 LFIGNLDPDVDEKLLYDTFSAFGV-IVTNPKIMRDPETGNSRGFGFISYDSFEASDAAIE 172
Query: 319 MGNTTQSSYLFGKQMKCSWGSK 340
N YL +Q+ S+ K
Sbjct: 173 AMN---GQYLCNRQITVSYAYK 191
Score = 43.1 bits (100), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 47/86 (54%), Gaps = 11/86 (12%)
Query: 261 QYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDK------GFGFVRYSTHAEAA 314
Q T YVGNL P+V++ L F + AG + V V +D+ G+GFV + + +A
Sbjct: 23 QDATAYVGNLDPQVSEELLWELF--VQAGPVVNVYVPKDRVTNSHQGYGFVEFRSEEDAD 80
Query: 315 LAIQMGNTTQSSYLFGKQMKCSWGSK 340
AI++ N + L+GK ++ + S+
Sbjct: 81 YAIKVLNMIK---LYGKPIRVNKASQ 103
>gi|390597906|gb|EIN07305.1| polyadenylate binding protein [Punctularia strigosozonata HHB-11173
SS5]
Length = 668
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 134/298 (44%), Gaps = 45/298 (15%)
Query: 53 PSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIR----KDKSSYGFIHYFDRRSAA 108
P+ S+YVG + V+E +L E+F+ GPV ++ R + Y +++YF+
Sbjct: 48 PAPSASLYVGELDPTVSEAMLFEIFNMIGPVASIRVCRDAVTRRSLGYAYVNYFNAADGE 107
Query: 109 MAILSLNGRHLFGQPIKVNWAYASGQRE---DTSGHFNIFVGDLSPEVTDATLFACFSVY 165
A+ LN + G+ ++ W+ QR+ +G NIF+ +L + + L F+ +
Sbjct: 108 RALEQLNYSLIKGRACRIMWS----QRDPALRKTGQGNIFIKNLDDAIDNKALHDTFAAF 163
Query: 166 PSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNN 225
+ +V D+ GRS+G+GFV + + A+SAI + G L +++ G++
Sbjct: 164 GNVLSCKVATDE-MGRSKGYGFVHYETNEAAESAIKAVNGMLLNDKKVYV-------GHH 215
Query: 226 EDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHS 285
K+ AK E Q+T VYV N+ PE + F
Sbjct: 216 VSKKDRQAK--------------------LDEQKKQFTNVYVKNIDPEANDDEFRELFTP 255
Query: 286 LG---AGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSK 340
G + V++ R +GFGFV + TH EA A+ +T S G+++ S K
Sbjct: 256 FGNVTSAVLQRDEEGRSRGFGFVNFETHEEAQKAV---DTLHDSDFKGRKLFVSRAQK 310
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 126/283 (44%), Gaps = 34/283 (12%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKD---KSSYGFIHYFDRRSAAMAILSL 114
++++ N+ + L + F++ G V CK+ + YGF+HY +A AI ++
Sbjct: 141 NIFIKNLDDAIDNKALHDTFAAFGNVLSCKVATDEMGRSKGYGFVHYETNEAAESAIKAV 200
Query: 115 NGRHLFGQPIKVNWAYASGQR-----EDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCS 169
NG L + + V + R E N++V ++ PE D F+ + + +
Sbjct: 201 NGMLLNDKKVYVGHHVSKKDRQAKLDEQKKQFTNVYVKNIDPEANDDEFRELFTPFGNVT 260
Query: 170 DARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQ 229
A + D++ GRSRGFGFV+F ++AQ A++ L R++ + A K + E+ +
Sbjct: 261 SAVLQRDEE-GRSRGFGFVNFETHEEAQKAVDTLHDSDFKGRKLFVSRAQKKSEREEELR 319
Query: 230 SSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAG 289
S ++ +E + Q +Y+ NL +V L F GA
Sbjct: 320 RSYEQAKMEKMSKY-----------------QGVNLYIKNLEDDVDDEKLRDAFEPFGA- 361
Query: 290 VIEEVRVQR-----DKGFGFVRYSTHAEAALAI-QMGNTTQSS 326
I +V R KGFGFV +S+ EA A+ +M N S
Sbjct: 362 -ITSAKVMRTEGGTSKGFGFVCFSSPDEATKAVAEMNNKMMGS 403
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 85/181 (46%), Gaps = 19/181 (10%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS---YGFIHYFDRRSAAMAILSL 114
+VYV NI + + +E+F+ G V L R ++ +GF+++ A A+ +L
Sbjct: 234 NVYVKNIDPEANDDEFRELFTPFGNVTSAVLQRDEEGRSRGFGFVNFETHEEAQKAVDTL 293
Query: 115 NGRHLFGQPIKVNWAYASGQREDTSGH---------------FNIFVGDLSPEVTDATLF 159
+ G+ + V+ A +RE+ N+++ +L +V D L
Sbjct: 294 HDSDFKGRKLFVSRAQKKSEREEELRRSYEQAKMEKMSKYQGVNLYIKNLEDDVDDEKLR 353
Query: 160 ACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT 219
F + + + A+VM + G S+GFGFV F + +A A+ ++ K +GS+ + + A
Sbjct: 354 DAFEPFGAITSAKVMRTE-GGTSKGFGFVCFSSPDEATKAVAEMNNKMMGSKPLYVSLAQ 412
Query: 220 K 220
+
Sbjct: 413 R 413
>gi|255954935|ref|XP_002568220.1| Pc21g11890 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211589931|emb|CAP96086.1| Pc21g11890 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 408
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 90/303 (29%), Positives = 144/303 (47%), Gaps = 31/303 (10%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIR-----KDKSSYGFIHYFDRRSAAMAIL 112
++++G + + E ++ ++ G K+IR + + Y F+ F +AA L
Sbjct: 61 TLWMGELEPWIDENFIRNLWFQMGEQVNVKMIRDKFSGRSNAGYCFVD-FASPAAAAKAL 119
Query: 113 SLNGRHL--FGQPIKVNWAYASG----QREDTSGHFNIFVGDLSPEVTDATLFACF-SVY 165
SLNG + + K+NWA G R+D ++IFVGDL PEV + L + F S +
Sbjct: 120 SLNGTPMPNTNRVFKLNWATGGGLADRSRDDRGPEYSIFVGDLGPEVNEYVLVSLFQSRF 179
Query: 166 PSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNN 225
PSC A++M D +G SRG+GFV F ++ D Q A+ ++ G + G+R +R + AT N
Sbjct: 180 PSCKSAKIMTDPISGMSRGYGFVRFSDENDQQRALTEMQGVYCGNRPMRISTATP---KN 236
Query: 226 EDKQSSDAKSVVELTNGSSEDGKETTNTE-----APE-----NNPQYTTVYVGNLAPEVT 275
+ G + AP+ +P TTV+VG L+ VT
Sbjct: 237 KGPGVGGNGGAAMGMPGPAGMYPPMGGPPMPFYGAPQPMNQFTDPNNTTVFVGGLSGYVT 296
Query: 276 QLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKC 335
+ +L F G G I V++ KG GFV++ A +AI N Q + +++
Sbjct: 297 EDELRSFFQ--GFGEITYVKIPPGKGCGFVQFVQRHAAEMAI---NQMQGYPIGNSRVRL 351
Query: 336 SWG 338
SWG
Sbjct: 352 SWG 354
>gi|242824548|ref|XP_002488281.1| mRNA binding post-transcriptional regulator (Csx1), putative
[Talaromyces stipitatus ATCC 10500]
gi|218713202|gb|EED12627.1| mRNA binding post-transcriptional regulator (Csx1), putative
[Talaromyces stipitatus ATCC 10500]
Length = 393
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 93/299 (31%), Positives = 148/299 (49%), Gaps = 25/299 (8%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS-----YGFIHYFDRRSAAMAIL 112
++++G + + E ++ ++ G K+IR DK S Y F+ F +AA L
Sbjct: 60 TLWMGELEPWIDENFIRNLWFQMGEQVNVKMIR-DKFSGSNAGYCFVD-FASPAAAAKAL 117
Query: 113 SLNGRHL--FGQPIKVNWAYASG----QREDTSGHFNIFVGDLSPEVTDATLFACF-SVY 165
SLNG + + K+NWA G R++ ++IFVGDL PEV + L + F S +
Sbjct: 118 SLNGTPMPNTTRAFKLNWATGGGLADRGRDERGPEYSIFVGDLGPEVNEYVLVSLFQSRF 177
Query: 166 PSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT-KGAGN 224
PSC A++M D +G SRG+GFV F ++ D Q A++++ G + G+R +R + AT K G
Sbjct: 178 PSCKSAKIMTDPISGMSRGYGFVRFSDENDQQRALSEMQGVYCGNRPMRISTATPKNKGP 237
Query: 225 NEDKQSSDAKSVVELTNGSSEDGKETTNTEAPE-----NNPQYTTVYVGNLAPEVTQLDL 279
+ ++ G AP+ +P TTV+VG L+ VT+ +L
Sbjct: 238 GVGPGGMGMPGPAGIYPPAAMGGPPMGFYGAPQPMNQFTDPNNTTVFVGGLSGYVTEDEL 297
Query: 280 HRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWG 338
F G G I V++ KG GFV++ A +AI N Q + +++ SWG
Sbjct: 298 RSFFQ--GFGEITYVKIPPGKGCGFVQFVQRHAAEMAI---NQMQGYPIGNSRVRLSWG 351
>gi|242824554|ref|XP_002488282.1| mRNA binding post-transcriptional regulator (Csx1), putative
[Talaromyces stipitatus ATCC 10500]
gi|218713203|gb|EED12628.1| mRNA binding post-transcriptional regulator (Csx1), putative
[Talaromyces stipitatus ATCC 10500]
Length = 392
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 93/299 (31%), Positives = 148/299 (49%), Gaps = 25/299 (8%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS-----YGFIHYFDRRSAAMAIL 112
++++G + + E ++ ++ G K+IR DK S Y F+ F +AA L
Sbjct: 60 TLWMGELEPWIDENFIRNLWFQMGEQVNVKMIR-DKFSGSNAGYCFVD-FASPAAAAKAL 117
Query: 113 SLNGRHL--FGQPIKVNWAYASG----QREDTSGHFNIFVGDLSPEVTDATLFACF-SVY 165
SLNG + + K+NWA G R++ ++IFVGDL PEV + L + F S +
Sbjct: 118 SLNGTPMPNTTRAFKLNWATGGGLADRGRDERGPEYSIFVGDLGPEVNEYVLVSLFQSRF 177
Query: 166 PSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT-KGAGN 224
PSC A++M D +G SRG+GFV F ++ D Q A++++ G + G+R +R + AT K G
Sbjct: 178 PSCKSAKIMTDPISGMSRGYGFVRFSDENDQQRALSEMQGVYCGNRPMRISTATPKNKGP 237
Query: 225 NEDKQSSDAKSVVELTNGSSEDGKETTNTEAPE-----NNPQYTTVYVGNLAPEVTQLDL 279
+ ++ G AP+ +P TTV+VG L+ VT+ +L
Sbjct: 238 GVGPGGMGMPGPAGIYPPAAMGGPPMGFYGAPQPMNQFTDPNNTTVFVGGLSGYVTEDEL 297
Query: 280 HRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWG 338
F G G I V++ KG GFV++ A +AI N Q + +++ SWG
Sbjct: 298 RSFFQ--GFGEITYVKIPPGKGCGFVQFVQRHAAEMAI---NQMQGYPIGNSRVRLSWG 351
>gi|425773059|gb|EKV11433.1| MRNA binding post-transcriptional regulator (Csx1), putative
[Penicillium digitatum Pd1]
gi|425778836|gb|EKV16941.1| MRNA binding post-transcriptional regulator (Csx1), putative
[Penicillium digitatum PHI26]
Length = 408
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 90/303 (29%), Positives = 144/303 (47%), Gaps = 31/303 (10%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIR-----KDKSSYGFIHYFDRRSAAMAIL 112
++++G + + E ++ ++ G K+IR + + Y F+ F +AA L
Sbjct: 61 TLWMGELEPWIDENFIRNLWFQMGEQVNVKMIRDKFSGRSNAGYCFVD-FASPAAAAKAL 119
Query: 113 SLNGRHL--FGQPIKVNWAYASG----QREDTSGHFNIFVGDLSPEVTDATLFACF-SVY 165
SLNG + + K+NWA G R+D ++IFVGDL PEV + L + F S +
Sbjct: 120 SLNGTPMPNTNRVFKLNWATGGGLADRSRDDRGPEYSIFVGDLGPEVNEYVLVSLFQSRF 179
Query: 166 PSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNN 225
PSC A++M D +G SRG+GFV F ++ D Q A+ ++ G + G+R +R + AT N
Sbjct: 180 PSCKSAKIMTDPISGMSRGYGFVRFSDENDQQRALTEMQGVYCGNRPMRISTATP---KN 236
Query: 226 EDKQSSDAKSVVELTNGSSEDGKETTNTE-----APE-----NNPQYTTVYVGNLAPEVT 275
+ G + AP+ +P TTV+VG L+ VT
Sbjct: 237 KGPGVGGNGGAAMGMPGPAGMYPPMGGPPMPFYGAPQPMNQFTDPNNTTVFVGGLSGYVT 296
Query: 276 QLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKC 335
+ +L F G G I V++ KG GFV++ A +AI N Q + +++
Sbjct: 297 EDELRSFFQ--GFGEITYVKIPPGKGCGFVQFVQRHAAEMAI---NQMQGYPIGNSRVRL 351
Query: 336 SWG 338
SWG
Sbjct: 352 SWG 354
>gi|403216743|emb|CCK71239.1| hypothetical protein KNAG_0G01810 [Kazachstania naganishii CBS
8797]
Length = 596
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 79/284 (27%), Positives = 132/284 (46%), Gaps = 46/284 (16%)
Query: 50 GFDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIR----KDKSSYGFIHYFDRR 105
G + T S+YVG + V+E LL ++FS G V ++ R K Y ++++ D
Sbjct: 40 GDNDVTSTSLYVGELDPSVSEALLYDLFSPIGSVASIRVCRDAITKTSLGYAYVNFSDHE 99
Query: 106 SAAMAILSLNGRHLFGQPIKVNWAYASGQREDT---SGHFNIFVGDLSPEVTDATLFACF 162
+ AI LN + G+ ++ W+ QR+ + GH NIF+ +L+ ++ + LF F
Sbjct: 100 AGKQAIEKLNYTPIKGKLCRIMWS----QRDPSLRKKGHGNIFIKNLNQDIDNKALFDTF 155
Query: 163 SVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGA 222
SV+ + +++ D+ TG+S+GFGFV F + A AI+ L G L ++I
Sbjct: 156 SVFGNILSSKIATDE-TGKSKGFGFVHFEEESAANEAIDALNGMLLNGQEIYV------- 207
Query: 223 GNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRH 282
LT ++ +++ E +T VYV N+ E T +
Sbjct: 208 -------------APHLT-------RKERDSQLEETKAHFTNVYVKNIDLETTDEEFKEF 247
Query: 283 FHSLGAGVIEEVRVQRD-----KGFGFVRYSTHAEAALAIQMGN 321
F + G + V ++R KGFGFV Y H +A A++ N
Sbjct: 248 FGKI--GTVTSVALERGPDGKLKGFGFVNYEDHNDAVKAVEELN 289
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 76/287 (26%), Positives = 121/287 (42%), Gaps = 37/287 (12%)
Query: 52 DPSTCR----SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKD---KSSYGFIHYFDR 104
DPS + ++++ N++ + L + FS G + K+ + +GF+H+ +
Sbjct: 126 DPSLRKKGHGNIFIKNLNQDIDNKALFDTFSVFGNILSSKIATDETGKSKGFGFVHFEEE 185
Query: 105 RSAAMAILSLNGRHLFGQPIKVNWAYASGQR----EDTSGHF-NIFVGDLSPEVTDATLF 159
+A AI +LNG L GQ I V +R E+T HF N++V ++ E TD
Sbjct: 186 SAANEAIDALNGMLLNGQEIYVAPHLTRKERDSQLEETKAHFTNVYVKNIDLETTDEEFK 245
Query: 160 ACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT 219
F + + + G+ +GFGFV++ + DA A+ +L G +++ A
Sbjct: 246 EFFGKIGTVTSV-ALERGPDGKLKGFGFVNYEDHNDAVKAVEELNGAEFKDQELFVGRAQ 304
Query: 220 KGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDL 279
K E QS + E+T E Q ++V NL + L
Sbjct: 305 K---KYERIQSLKKQY-------------ESTRLEKMAKY-QGVNLFVKNLDDSIDDEKL 347
Query: 280 HRHFHSLGAGVIEEVRVQR-----DKGFGFVRYSTHAEAALAIQMGN 321
F G I V+V R KGFGFV +S+ EA AI N
Sbjct: 348 QEEFAPFGN--ITSVKVMRTENGKSKGFGFVCFSSPEEATKAITEKN 392
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 46/93 (49%), Gaps = 11/93 (11%)
Query: 254 EAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDK------GFGFVRY 307
+A +N+ T++YVG L P V++ L+ F +G+ + +RV RD G+ +V +
Sbjct: 38 QAGDNDVTSTSLYVGELDPSVSEALLYDLFSPIGS--VASIRVCRDAITKTSLGYAYVNF 95
Query: 308 STHAEAALAIQMGNTTQSSYLFGKQMKCSWGSK 340
S H AI+ N T + GK + W +
Sbjct: 96 SDHEAGKQAIEKLNYTP---IKGKLCRIMWSQR 125
>gi|363753804|ref|XP_003647118.1| hypothetical protein Ecym_5562 [Eremothecium cymbalariae
DBVPG#7215]
gi|356890754|gb|AET40301.1| hypothetical protein Ecym_5562 [Eremothecium cymbalariae
DBVPG#7215]
Length = 580
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 73/276 (26%), Positives = 131/276 (47%), Gaps = 42/276 (15%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS----YGFIHYFDRRSAAMAILS 113
S+YVG + V+E LL ++FS G V ++ R ++ Y ++++ D + AI
Sbjct: 39 SLYVGELDPSVSEALLYDIFSPIGSVSSIRVCRDAITNTSLGYAYVNFHDHEAGRKAIEQ 98
Query: 114 LNGRHLFGQPIKVNWAYASGQREDT---SGHFNIFVGDLSPEVTDATLFACFSVYPSCSD 170
LN + G+P ++ W+ QR+ + G NI++ +L P + + +L FS + +
Sbjct: 99 LNYTLIKGKPCRIMWS----QRDPSLRKKGSGNIYIKNLHPAIDNKSLHETFSTFGNILS 154
Query: 171 ARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQS 230
+V D G SRGFGFV F N+ DA+ AI + G + +++ W + +D+QS
Sbjct: 155 CKVATDD-NGVSRGFGFVHFENESDARDAIEAVNGMLMNDQEVYVAWHV----SKKDRQS 209
Query: 231 SDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLG--- 287
+ E ++T +YV N+ E +Q + + F G
Sbjct: 210 -----------------------KLEEVKAKFTNIYVKNIDLETSQEEFEQLFSKYGKIT 246
Query: 288 AGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTT 323
+ V+E+ + +GFGF+ + H+ AA A+ N +
Sbjct: 247 SAVLEKDSEGKLRGFGFINFEDHSTAARAVDELNES 282
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 78/289 (26%), Positives = 124/289 (42%), Gaps = 41/289 (14%)
Query: 52 DPSTCR----SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDK---SSYGFIHYFDR 104
DPS + ++Y+ N+H + L E FS+ G + CK+ D +GF+H+ +
Sbjct: 117 DPSLRKKGSGNIYIKNLHPAIDNKSLHETFSTFGNILSCKVATDDNGVSRGFGFVHFENE 176
Query: 105 RSAAMAILSLNGRHLFGQPIKVNWAYASGQR----EDTSGHF-NIFVGDLSPEVTDATLF 159
A AI ++NG + Q + V W + R E+ F NI+V ++ E +
Sbjct: 177 SDARDAIEAVNGMLMNDQEVYVAWHVSKKDRQSKLEEVKAKFTNIYVKNIDLETSQEEFE 236
Query: 160 ACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT 219
FS Y + A V+ G+ RGFGF++F + A A+++L + + A
Sbjct: 237 QLFSKYGKITSA-VLEKDSEGKLRGFGFINFEDHSTAARAVDELNESDFRGQTLYVGRAQ 295
Query: 220 KGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQY--TTVYVGNLAPEVTQL 277
K +E +Q EL K+ T E +Y +++ NL +
Sbjct: 296 K---KHERQQ--------EL--------KKQYETARLEKLAKYQGVNLFIKNLDDSIDDE 336
Query: 278 DLHRHFHSLGAGVIEEVRVQRD-----KGFGFVRYSTHAEAALAIQMGN 321
L F G I V+V +D +GFGFV +ST EA AI N
Sbjct: 337 KLKDEFAPF--GTITSVKVMKDEAGSSRGFGFVCFSTPEEATKAITEKN 383
Score = 40.4 bits (93), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 45/97 (46%), Gaps = 11/97 (11%)
Query: 250 TTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDK------GFG 303
TT +E P+ ++YVG L P V++ L+ F +G+ + +RV RD G+
Sbjct: 25 TTESETPKVETSGASLYVGELDPSVSEALLYDIFSPIGS--VSSIRVCRDAITNTSLGYA 82
Query: 304 FVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSK 340
+V + H AI+ N T + GK + W +
Sbjct: 83 YVNFHDHEAGRKAIEQLNYT---LIKGKPCRIMWSQR 116
>gi|432102762|gb|ELK30241.1| Polyadenylate-binding protein 1-like protein [Myotis davidii]
Length = 603
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 81/279 (29%), Positives = 134/279 (48%), Gaps = 46/279 (16%)
Query: 49 PGFDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIR----KDKSSYGFIHYFDR 104
PGF + S+YVG++H VTE +L E FS GP+ ++ R + Y +I++
Sbjct: 6 PGFPLA---SLYVGDLHPDVTEAMLYEKFSLAGPILSIRVCRDVATRRSLGYAYINFQQP 62
Query: 105 RSAAMAILSLNGRHLFGQPIKVNWAYAS-GQREDTSGHFNIFVGDLSPEVTDATLFACFS 163
A +A+ ++N + GQPI++ W+ G R+ SG NIF+ +L + + L+ FS
Sbjct: 63 ADAELALDTMNFEVIKGQPIRIMWSQRDPGLRK--SGVGNIFIKNLEESIDNKALYDTFS 120
Query: 164 VYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAG 223
+ + +V+ D SRGFGFV F ++ AQ AI+ + G L +R++ +
Sbjct: 121 TFGNILSCKVVCDDHG--SRGFGFVHFETREAAQQAISTMNGMLLNNRKVFVS------- 171
Query: 224 NNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHF 283
+ + +Q +A+ V ++T VYV NL ++ + L F
Sbjct: 172 HFKSRQEREAELGVRAM--------------------EFTNVYVKNLQMDIDEQGLEELF 211
Query: 284 HSLGAGVIEEVRVQRD-----KGFGFVRYSTHAEAALAI 317
G + V+V RD +GFGFV + H EA A+
Sbjct: 212 SQFGKTL--SVKVMRDDSGHSRGFGFVNFEKHEEAQKAV 248
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 81/304 (26%), Positives = 135/304 (44%), Gaps = 40/304 (13%)
Query: 49 PGFDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRRS 106
PG S ++++ N+ + L + FS+ G + CK++ D S +GF+H+ R +
Sbjct: 91 PGLRKSGVGNIFIKNLEESIDNKALYDTFSTFGNILSCKVVCDDHGSRGFGFVHFETREA 150
Query: 107 AAMAILSLNGRHLFGQPIKVNWAYASGQREDTSG-----HFNIFVGDLSPEVTDATLFAC 161
A AI ++NG L + + V+ + +RE G N++V +L ++ + L
Sbjct: 151 AQQAISTMNGMLLNNRKVFVSHFKSRQEREAELGVRAMEFTNVYVKNLQMDIDEQGLEEL 210
Query: 162 FSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKG 221
FS + +VM D +G SRGFGFV+F ++AQ A+ D+ GK ++R G
Sbjct: 211 FSQFGKTLSVKVMRDD-SGHSRGFGFVNFEKHEEAQKAVMDMNGK-----EVRGQLLYVG 264
Query: 222 AGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHR 281
++ ++ K + +D N+ Q +YV NL + L +
Sbjct: 265 RAQKWAERQNELKRKFQQMKQMKQDRL---------NHYQGVNLYVKNLDDSIDNERLRK 315
Query: 282 HFHSLGAGVIEEVRVQRD----KGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSW 337
F GVI +V + KGFGFV +S+ EA A+ N C
Sbjct: 316 EFSPY--GVITSAKVMTEGGHSKGFGFVCFSSPEEATKAVTEMNG------------CIL 361
Query: 338 GSKP 341
G+KP
Sbjct: 362 GTKP 365
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 90/184 (48%), Gaps = 23/184 (12%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDK---SSYGFIHYFDRRSAAMAILSL 114
+VYV N+ + E L+E+FS G K++R D +GF+++ A A++ +
Sbjct: 192 NVYVKNLQMDIDEQGLEELFSQFGKTLSVKVMRDDSGHSRGFGFVNFEKHEEAQKAVMDM 251
Query: 115 NGRHLFGQPIKV----NWAYASGQ-----------REDTSGHF---NIFVGDLSPEVTDA 156
NG+ + GQ + V WA + ++D H+ N++V +L + +
Sbjct: 252 NGKEVRGQLLYVGRAQKWAERQNELKRKFQQMKQMKQDRLNHYQGVNLYVKNLDDSIDNE 311
Query: 157 TLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCN 216
L FS Y + A+VM + G S+GFGFV F + ++A A+ ++ G LG++ +
Sbjct: 312 RLRKEFSPYGVITSAKVMTE--GGHSKGFGFVCFSSPEEATKAVTEMNGCILGTKPLYVA 369
Query: 217 WATK 220
A +
Sbjct: 370 LAQR 373
>gi|391332716|ref|XP_003740776.1| PREDICTED: polyadenylate-binding protein 1-like [Metaseiulus
occidentalis]
Length = 660
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 87/283 (30%), Positives = 131/283 (46%), Gaps = 35/283 (12%)
Query: 52 DPSTCRS----VYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS---YGFIHYFDR 104
DPS +S V++ N+H + + + FS+ G + C++ ++ + YGF+H+
Sbjct: 90 DPSLRKSGVGNVFIKNLHKDIDNKAIFDTFSAFGNILSCRVATDEQGNSRGYGFVHFETE 149
Query: 105 RSAAMAILSLNGRHLFGQPIKVNWAYASGQREDTSGH-----FNIFVGDLSPEVTDATLF 159
+A AI +NG L + + V +RE G N++V + E+ D L
Sbjct: 150 EAANEAINKVNGMLLNEKKVFVGKFVPRSERERMMGDKARLFTNVYVKNFGEELDDGKLK 209
Query: 160 ACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGS-RQIRCNWA 218
F VY + ARVM DQ TG+SRGFGFVSF N +A+ A+ +L K LG+ ++I A
Sbjct: 210 EMFEVYGKITSARVMTDQ-TGKSRGFGFVSFENPDNAEQAVKELNDKELGNGKKIYVGRA 268
Query: 219 TKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLD 278
K A ++ SD K E + N +YV NL +
Sbjct: 269 QKKA-----ERLSDLKRKFEQLKMERMTRYQGVN------------LYVKNLDDVIDDER 311
Query: 279 LHRHFHSLG----AGVIEEVRVQRDKGFGFVRYSTHAEAALAI 317
L R F G A V+ + R KGFGFV +S+ EA A+
Sbjct: 312 LRREFAPYGTITSAKVMMDSTGARSKGFGFVCFSSPEEATKAV 354
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 125/282 (44%), Gaps = 46/282 (16%)
Query: 55 TCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIR----KDKSSYGFIHYFDRRSAAMA 110
T S+YVG++ VTE +L E F GPV ++ R + Y ++++ A A
Sbjct: 9 TMASLYVGDLDPDVTESMLFEKFCQAGPVLSIRVCRDMISRRSLGYAYVNFHQPGDAERA 68
Query: 111 ILSLNGRHLFGQPIKVNWAYASGQREDT---SGHFNIFVGDLSPEVTDATLFACFSVYPS 167
+ ++N L +P+++ W+ QR+ + SG N+F+ +L ++ + +F FS + +
Sbjct: 69 LDTMNFEPLKNRPMRIMWS----QRDPSLRKSGVGNVFIKNLHKDIDNKAIFDTFSAFGN 124
Query: 168 CSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNED 227
RV D++ G SRG+GFV F ++ A AIN + G L +++ + K +E
Sbjct: 125 ILSCRVATDEQ-GNSRGYGFVHFETEEAANEAINKVNGMLLNEKKV---FVGKFVPRSER 180
Query: 228 KQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLG 287
++ K+ + +T VYV N E+ L F G
Sbjct: 181 ERMMGDKARL------------------------FTNVYVKNFGEELDDGKLKEMFEVYG 216
Query: 288 AGVIEEVRVQRD-----KGFGFVRYSTHAEAALAIQMGNTTQ 324
I RV D +GFGFV + A A++ N +
Sbjct: 217 K--ITSARVMTDQTGKSRGFGFVSFENPDNAEQAVKELNDKE 256
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 80/170 (47%), Gaps = 19/170 (11%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRK---DKSSYGFIHYFDRRSAAMAILSL 114
+VYV N ++ + L+E+F G + +++ +GF+ + + +A A+ L
Sbjct: 193 NVYVKNFGEELDDGKLKEMFEVYGKITSARVMTDQTGKSRGFGFVSFENPDNAEQAVKEL 252
Query: 115 NGRHL-FGQPIKVNWAYASGQR-EDTSGHF--------------NIFVGDLSPEVTDATL 158
N + L G+ I V A +R D F N++V +L + D L
Sbjct: 253 NDKELGNGKKIYVGRAQKKAERLSDLKRKFEQLKMERMTRYQGVNLYVKNLDDVIDDERL 312
Query: 159 FACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWL 208
F+ Y + + A+VM D RS+GFGFV F + ++A A+ ++ G+ +
Sbjct: 313 RREFAPYGTITSAKVMMDSTGARSKGFGFVCFSSPEEATKAVTEMNGRII 362
>gi|126342190|ref|XP_001379497.1| PREDICTED: polyadenylate-binding protein 1 [Monodelphis domestica]
Length = 669
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 81/277 (29%), Positives = 129/277 (46%), Gaps = 27/277 (9%)
Query: 49 PGFDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRRS 106
PG +V+V N+ + L + FS+ G + CK+I + S YGF+H+ + S
Sbjct: 125 PGQRKRGVGNVFVKNLEKSIDNKALYDTFSTFGRILSCKVISDENGSKGYGFVHFETQES 184
Query: 107 AAMAILSLNGRHLFGQPIKVNWAYASGQREDTSG-----HFNIFVGDLSPEVTDATLFAC 161
A AI +NG L + V + +RE G + NI++ + + D L
Sbjct: 185 AGKAIEKMNGMLLNNLKVFVGRFKSRRERESELGVKAKDYTNIYIKNFGENMDDQRLTEI 244
Query: 162 FSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKG 221
F+ Y +VM D GRS+GFGFVSF++ +DAQ+A++D+ GK L +QI A K
Sbjct: 245 FAKYGPTLSVKVMTDD-CGRSKGFGFVSFQSHEDAQAAVDDMNGKQLNGKQIYVGRAQK- 302
Query: 222 AGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHR 281
++Q+ + E K+ + Q +Y+ NL + L +
Sbjct: 303 ---KRERQTELKRHF--------EQIKQNQHIRY-----QGVNLYIKNLDDTINDEHLRK 346
Query: 282 HFHSLGAGVIEEVRVQ--RDKGFGFVRYSTHAEAALA 316
F G +V ++ R KGFGFV +S+ +AA A
Sbjct: 347 EFSPFGTITSAKVMMENGRSKGFGFVCFSSSKDAAKA 383
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 74/284 (26%), Positives = 128/284 (45%), Gaps = 42/284 (14%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKS----SYGFIHYFDRRSAAMAILS 113
S+YVG++H VTE +L E FS GP+ ++ R + Y ++++ R A + +
Sbjct: 46 SLYVGDLHHDVTESMLYEKFSPAGPILSIRVCRDSVTQHSLGYAYVNFQHRAHAEWVLAT 105
Query: 114 LNGRHLFGQPIKVNWAYAS-GQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDAR 172
+N + G PI++ W+ GQR+ G N+FV +L + + L+ FS + +
Sbjct: 106 MNLDVIKGNPIRIMWSQRDPGQRKRGVG--NVFVKNLEKSIDNKALYDTFSTFGRILSCK 163
Query: 173 VMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSSD 232
V+ D+ S+G+GFV F Q+ A AI + G L + ++ G + ++ +
Sbjct: 164 VISDENG--SKGYGFVHFETQESAGKAIEKMNGMLLNNLKVFV-------GRFKSRRERE 214
Query: 233 AKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIE 292
++ V+ + YT +Y+ N + L F G +
Sbjct: 215 SELGVKAKD--------------------YTNIYIKNFGENMDDQRLTEIFAKYGPTLSV 254
Query: 293 EVRVQ---RDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQM 333
+V R KGFGFV + +H +A A+ N Q L GKQ+
Sbjct: 255 KVMTDDCGRSKGFGFVSFQSHEDAQAAVDDMNGKQ---LNGKQI 295
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 87/181 (48%), Gaps = 20/181 (11%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKD---KSSYGFIHYFDRRSAAMAILSL 114
++Y+ N + + L E+F+ GP K++ D +GF+ + A A+ +
Sbjct: 226 NIYIKNFGENMDDQRLTEIFAKYGPTLSVKVMTDDCGRSKGFGFVSFQSHEDAQAAVDDM 285
Query: 115 NGRHLFGQPIKVNWAYASGQRE-DTSGHF--------------NIFVGDLSPEVTDATLF 159
NG+ L G+ I V A +R+ + HF N+++ +L + D L
Sbjct: 286 NGKQLNGKQIYVGRAQKKRERQTELKRHFEQIKQNQHIRYQGVNLYIKNLDDTINDEHLR 345
Query: 160 ACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT 219
FS + + + A+VM + GRS+GFGFV F + +DA A ++ GK + S+ + + A
Sbjct: 346 KEFSPFGTITSAKVMME--NGRSKGFGFVCFSSSKDAAKASREMNGKLVASKPLYVSLAQ 403
Query: 220 K 220
+
Sbjct: 404 R 404
>gi|170589631|ref|XP_001899577.1| RNA recognition motif. [Brugia malayi]
gi|158593790|gb|EDP32385.1| RNA recognition motif [Brugia malayi]
Length = 287
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 73/224 (32%), Positives = 119/224 (53%), Gaps = 46/224 (20%)
Query: 135 REDTSGHFNIFVGDLSPEVTDATLFACF-------SVYP-------------SC-SDARV 173
+ DTS ++++FVGDLS EV + TL A F SV+ SC S+A+V
Sbjct: 78 KVDTSKNYHVFVGDLSTEVNNCTLKAAFESFGEISSVFRPSYNLPLYTLASLSCFSEAKV 137
Query: 174 MWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSSDA 233
+ D +T +S+G+GFVSF +++AQ AI ++ G+ +G RQIR NWA + E+ + D
Sbjct: 138 IRDPQTLKSKGYGFVSFPVKENAQKAIEEMNGQMIGRRQIRTNWAVRKFDGGEENVTYD- 196
Query: 234 KSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEE 293
++ T+ ++ T+VYVG ++P T +L + F ++ + E
Sbjct: 197 -NIFNATHAAN------------------TSVYVGGISPITTDEELMQSFSAIATVI--E 235
Query: 294 VRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSW 337
VR+ + +G+ FVRY AA AI N + G++++CSW
Sbjct: 236 VRLFKQQGYAFVRYLNKDAAARAIMSMN---GKVINGQKIRCSW 276
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 92/213 (43%), Gaps = 43/213 (20%)
Query: 49 PGFDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGC---------------------K 87
P D S V+VG++ T+V L+ F S G + K
Sbjct: 77 PKVDTSKNYHVFVGDLSTEVNNCTLKAAFESFGEISSVFRPSYNLPLYTLASLSCFSEAK 136
Query: 88 LIRKDKS----SYGFIHYFDRRSAAMAILSLNGRHLFGQPIKVNWA---YASGQREDTSG 140
+IR ++ YGF+ + + +A AI +NG+ + + I+ NWA + G+ T
Sbjct: 137 VIRDPQTLKSKGYGFVSFPVKENAQKAIEEMNGQMIGRRQIRTNWAVRKFDGGEENVTYD 196
Query: 141 H-FN--------IFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFR 191
+ FN ++VG +SP TD L FS + + R+ Q G+ FV +
Sbjct: 197 NIFNATHAANTSVYVGGISPITTDEELMQSFSAIATVIEVRLFKQQ------GYAFVRYL 250
Query: 192 NQQDAQSAINDLTGKWLGSRQIRCNWATKGAGN 224
N+ A AI + GK + ++IRC+W+ N
Sbjct: 251 NKDAAARAIMSMNGKVINGQKIRCSWSRTTMDN 283
>gi|403417917|emb|CCM04617.1| predicted protein [Fibroporia radiculosa]
Length = 671
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 129/271 (47%), Gaps = 42/271 (15%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIR----KDKSSYGFIHYFDRRSAAMAILS 113
S+YVG + VTE +L E+F+ GPV ++ R + Y +++Y + A+
Sbjct: 45 SLYVGELDPTVTEAMLFEIFNMIGPVASIRVCRDAVTRRSLGYAYVNYLNAADGERALEQ 104
Query: 114 LNGRHLFGQPIKVNWAYASGQRE---DTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSD 170
LN + G+ ++ W+ QR+ +G NIF+ +L ++ + L F+ + +
Sbjct: 105 LNYSSIKGRACRIMWS----QRDPALRKTGQGNIFIKNLDEQIDNKALHDTFAAFGNVLS 160
Query: 171 ARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQS 230
+V D+ GRS+G+GFV + + A++AI + G L +++ + + +++QS
Sbjct: 161 CKVATDEH-GRSKGYGFVHYETAEAAETAIKAVNGMLLNDKKVYVGYHI----SRKERQS 215
Query: 231 SDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQ---LDLHRHFHSLG 287
+ E Q+T +YV N PEVT+ + L + F S+
Sbjct: 216 -----------------------KLEEMKAQFTNIYVKNFDPEVTEEEFMALFQQFGSVT 252
Query: 288 AGVIEEVRVQRDKGFGFVRYSTHAEAALAIQ 318
+ VI+ R +GFGFV + H EA A++
Sbjct: 253 SAVIQRDDEGRSRGFGFVNFEVHDEAQKAVE 283
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 129/278 (46%), Gaps = 34/278 (12%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKD---KSSYGFIHYFDRRSAAMAILSL 114
++++ N+ Q+ L + F++ G V CK+ + YGF+HY +A AI ++
Sbjct: 133 NIFIKNLDEQIDNKALHDTFAAFGNVLSCKVATDEHGRSKGYGFVHYETAEAAETAIKAV 192
Query: 115 NGRHLFGQPIKVNWAYASGQR----EDTSGHF-NIFVGDLSPEVTDATLFACFSVYPSCS 169
NG L + + V + + +R E+ F NI+V + PEVT+ A F + S +
Sbjct: 193 NGMLLNDKKVYVGYHISRKERQSKLEEMKAQFTNIYVKNFDPEVTEEEFMALFQQFGSVT 252
Query: 170 DARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQ 229
A + D + GRSRGFGFV+F +AQ A+ L +++ + A K A ++ +
Sbjct: 253 SAVIQRDDE-GRSRGFGFVNFEVHDEAQKAVEGLHDLDFKGKKLFVSRAQKKAEREQELR 311
Query: 230 SSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAG 289
S ++ +E + Q +Y+ NL ++ L F G+
Sbjct: 312 QSYEQAKMEKMSKF-----------------QGVNLYIKNLEDDLDDDRLRTEFEPFGS- 353
Query: 290 VIEEVRVQRD-----KGFGFVRYSTHAEAALAI-QMGN 321
I +V RD KGFGFV +S+ EA A+ +M N
Sbjct: 354 -ITSAKVMRDEKGTSKGFGFVCFSSPDEATKAVAEMNN 390
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 85/181 (46%), Gaps = 19/181 (10%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKS---SYGFIHYFDRRSAAMAILSL 114
++YV N +VTE +F G V + R D+ +GF+++ A A+ L
Sbjct: 226 NIYVKNFDPEVTEEEFMALFQQFGSVTSAVIQRDDEGRSRGFGFVNFEVHDEAQKAVEGL 285
Query: 115 NGRHLFGQPIKVNWAYASGQRE------------DTSGHF---NIFVGDLSPEVTDATLF 159
+ G+ + V+ A +RE + F N+++ +L ++ D L
Sbjct: 286 HDLDFKGKKLFVSRAQKKAEREQELRQSYEQAKMEKMSKFQGVNLYIKNLEDDLDDDRLR 345
Query: 160 ACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT 219
F + S + A+VM D+K G S+GFGFV F + +A A+ ++ K +G++ + + A
Sbjct: 346 TEFEPFGSITSAKVMRDEK-GTSKGFGFVCFSSPDEATKAVAEMNNKMIGTKPLYVSLAQ 404
Query: 220 K 220
+
Sbjct: 405 R 405
>gi|384251873|gb|EIE25350.1| polyadenylate binding protein [Coccomyxa subellipsoidea C-169]
Length = 681
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 84/302 (27%), Positives = 135/302 (44%), Gaps = 33/302 (10%)
Query: 49 PGFDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKL---IRKDKSSYGFIHYFDRR 105
P F S ++++ N+ + L + F++ G + CK+ + + YGF+HY
Sbjct: 115 PAFRKSGVGNIFIKNLDKDIDNKALHDTFTAFGTILSCKVATDLAGNSKGYGFVHYEKEE 174
Query: 106 SAAMAILSLNGRHLFGQPIKVNWAYASGQRE-DTSGHF-NIFVGDLSPEVTDATLFACFS 163
+A +AI +NG L G+ + V +R D H+ N+FV +LS +TD + F+
Sbjct: 175 AAQLAIEKVNGMLLEGKKVFVGPFLKRTERPVDKEQHYTNVFVKNLSENLTDEEVEKMFN 234
Query: 164 VYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAG 223
+ + +M D+ G+S+GFGF++F + + A +A+ L GK + +++ C A K
Sbjct: 235 EHGMVTSFAIMKDE-AGKSKGFGFINFEDAEGAHAAVTALNGKEIDGKELYCGRAQK--- 290
Query: 224 NNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHF 283
A+ EL E +E Q +YV NL EV L F
Sbjct: 291 --------KAEREAELKQKFDEVRQERIAKY------QGMNLYVKNLVDEVDDDQLRAEF 336
Query: 284 HSLGAGVIEEVRVQRD-----KGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWG 338
G I +V +D KGFGFV YS+ EA A+ N L GK M +
Sbjct: 337 AP--HGTITSAKVMKDSAGKSKGFGFVCYSSPEEATRAVTEMN---GKMLLGKPMYVALA 391
Query: 339 SK 340
+
Sbjct: 392 QR 393
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 75/309 (24%), Positives = 131/309 (42%), Gaps = 59/309 (19%)
Query: 53 PSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIR----KDKSSYGFIHY---FDRR 105
P S+YVG++ VTE L E+FS GPV ++ R + Y +++Y D
Sbjct: 20 PVHNSSLYVGDLDRDVTEAQLFEIFSQIGPVASIRVCRDAVTRRSLGYAYVNYNSALDAA 79
Query: 106 SAAMAILSLNGRHLF--------GQPIKVNWAYASGQREDTSGHFNIFVGDLSPEVTDAT 157
+A AI +LN + +P+++ W++ SG NIF+ +L ++ +
Sbjct: 80 AAERAIEALNYTSVIPGKEGGEDSKPMRIMWSHRDPAFR-KSGVGNIFIKNLDKDIDNKA 138
Query: 158 LFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNW 217
L F+ + + +V D G S+G+GFV + ++ AQ AI + G L +++
Sbjct: 139 LHDTFTAFGTILSCKVATDL-AGNSKGYGFVHYEKEEAAQLAIEKVNGMLLEGKKVFV-- 195
Query: 218 ATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQ-YTTVYVGNLAPEVTQ 276
G TE P + Q YT V+V NL+ +T
Sbjct: 196 -----------------------------GPFLKRTERPVDKEQHYTNVFVKNLSENLTD 226
Query: 277 LDLHRHFHSLGAGVIEEVRVQRD-----KGFGFVRYSTHAEAALAIQMGNTTQSSYLFGK 331
++ + F+ G++ + +D KGFGF+ + A A+ N + + GK
Sbjct: 227 EEVEKMFNE--HGMVTSFAIMKDEAGKSKGFGFINFEDAEGAHAAVTALNGKE---IDGK 281
Query: 332 QMKCSWGSK 340
++ C K
Sbjct: 282 ELYCGRAQK 290
>gi|225559592|gb|EEH07874.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Ajellomyces capsulatus G186AR]
Length = 290
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 58/124 (46%), Positives = 82/124 (66%), Gaps = 7/124 (5%)
Query: 57 RSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS----YGFIHYFDRRSAAMAIL 112
R++Y+G + +VTE +L+++F +TG V+ K+I DK+S YGF+ Y D +A A+
Sbjct: 92 RALYIGGLDARVTEDILRQIFETTGHVQSVKII-PDKNSKGLNYGFVEYDDPGAAERAMS 150
Query: 113 SLNGRHLFGQPIKVNWAYASGQ--REDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSD 170
+LNGR + I+VNWAY S +EDTS HF+IFVGDLS EV D L FS + S S+
Sbjct: 151 TLNGRRVHQSEIRVNWAYQSNNNNKEDTSNHFHIFVGDLSNEVNDEVLLQAFSAFGSVSE 210
Query: 171 ARVM 174
ARV+
Sbjct: 211 ARVI 214
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 34/153 (22%), Positives = 64/153 (41%), Gaps = 33/153 (21%)
Query: 144 IFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDL 203
+++G L VT+ L F +++ D K + +GFV + + A+ A++ L
Sbjct: 94 LYIGGLDARVTEDILRQIFETTGHVQSVKIIPD-KNSKGLNYGFVEYDDPGAAERAMSTL 152
Query: 204 TGKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYT 263
G+ + +IR NWA + NN++ S+ +
Sbjct: 153 NGRRVHQSEIRVNWAYQSNNNNKEDTSN------------------------------HF 182
Query: 264 TVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRV 296
++VG+L+ EV L + F + G+ + E RV
Sbjct: 183 HIFVGDLSNEVNDEVLLQAFSAFGS--VSEARV 213
>gi|148910710|gb|ABR18422.1| unknown [Picea sitchensis]
Length = 418
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 86/296 (29%), Positives = 144/296 (48%), Gaps = 27/296 (9%)
Query: 56 CRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS----YGFIHYFDRRSAAMAI 111
R+++VG++ + E +Q F + V K+IR ++ YGF+ + A +
Sbjct: 78 VRTLWVGDLQYWMDETYMQSCFGNNQEVVSVKIIRNKQTGQSEGYGFVEFASHAGAERFL 137
Query: 112 LSLNGRHL--FGQPIKVNWA-YASGQREDTSG-HFNIFVGDLSPEVTDATLFACF-SVYP 166
+ NG + Q ++NWA + G++ G + IFVGDL+ +VTD L F S Y
Sbjct: 138 QNHNGAQMPNTEQFYRLNWATFGIGEKRPEMGPDYPIFVGDLASDVTDYLLQETFRSRYQ 197
Query: 167 SCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNE 226
+ A+V+ D+ TGRS+G+GFV F ++ + A+ ++ G + SR +R AT
Sbjct: 198 TVKGAKVVSDRVTGRSKGYGFVRFGDENEQVRAMTEMNGMFCSSRPMRTGPAT------- 250
Query: 227 DKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSL 286
+ + + + A +N+P TT++VG L P VT L + F
Sbjct: 251 ----TKKTTGFQQPYPKAAAAAVPPQVVASDNDPNNTTIFVGGLDPSVTDEMLRQLFGQF 306
Query: 287 GAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQ-MKCSWGSKP 341
G V V++ K GFV+++ A A A+QM + T + G+Q ++ SWG P
Sbjct: 307 GELV--HVKIPVGKRCGFVQFNNRASAEEALQMLHGT----VLGQQAIRLSWGRSP 356
Score = 39.3 bits (90), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 43/78 (55%), Gaps = 3/78 (3%)
Query: 52 DPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSSYGFIHYFDRRSAAMAI 111
DP+ +++VG + VT+ +L+++F G + K+ + GF+ + +R SA A+
Sbjct: 279 DPNNT-TIFVGGLDPSVTDEMLRQLFGQFGELVHVKIPVGKRC--GFVQFNNRASAEEAL 335
Query: 112 LSLNGRHLFGQPIKVNWA 129
L+G L Q I+++W
Sbjct: 336 QMLHGTVLGQQAIRLSWG 353
>gi|395548760|ref|XP_003775245.1| PREDICTED: polyadenylate-binding protein 1-like [Sarcophilus
harrisii]
Length = 730
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 85/283 (30%), Positives = 128/283 (45%), Gaps = 31/283 (10%)
Query: 52 DPSTCRS----VYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRR 105
DPS +S V+V N+ + L + FSS G + CK+I D S YGF+H+ R
Sbjct: 189 DPSLRKSGIGNVFVKNLEKSINNKSLYDAFSSFGNILSCKVITDDNGSKGYGFVHFEHRE 248
Query: 106 SAAMAILSLNGRHLFGQPIKVNWAYASGQREDTSG-----HFNIFVGDLSPEVTDATLFA 160
SA AI +NG L I V + RE G N+++ + ++ + L
Sbjct: 249 SAERAIQKMNGILLNDLKIFVGHFKSRKDRESELGAQTREFTNVYIKNFGEDMDEDRLSK 308
Query: 161 CFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATK 220
F + +VM D GRS+GFGFV+F+ +DAQ+AI+++ GK L RQI A K
Sbjct: 309 IFEKFGPTLSVKVMRDD-CGRSKGFGFVNFQKHEDAQNAIDNMNGKELNGRQIYAGRAQK 367
Query: 221 GAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLH 280
++Q+ + +L Q +Y+ NL ++ +L
Sbjct: 368 KL----ERQTQLQRHFEQLKQNRIV-------------RYQGVNLYIKNLDDDIDDENLR 410
Query: 281 RHFHSLGAGVIEEVRVQ--RDKGFGFVRYSTHAEAALAIQMGN 321
+ F S G +V + R KGFGFV +S EA A+ N
Sbjct: 411 KEFSSFGTITSAKVMMNNGRSKGFGFVCFSAPEEATTAVTEMN 453
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 78/292 (26%), Positives = 139/292 (47%), Gaps = 50/292 (17%)
Query: 54 STCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKS----SYGFIHYFDRRSAAM 109
ST S+YVG++H +VTE +L E FS GP+ ++ R + Y ++++ A
Sbjct: 107 STMASLYVGDLHHEVTEAMLYEKFSPAGPILSIRVCRDAVTHRSLGYAYVNFQHLADAER 166
Query: 110 AILSLNGRHLFGQPIKVNWAYASGQREDT---SGHFNIFVGDLSPEVTDATLFACFSVYP 166
+ +N + G+P+++ W+ QR+ + SG N+FV +L + + +L+ FS +
Sbjct: 167 VMTDMNLYIIKGKPVRLMWS----QRDPSLRKSGIGNVFVKNLEKSINNKSLYDAFSSFG 222
Query: 167 SCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNE 226
+ +V+ D S+G+GFV F +++ A+ AI + G L +I G+ +
Sbjct: 223 NILSCKVITDDNG--SKGYGFVHFEHRESAERAIQKMNGILLNDLKI-------FVGHFK 273
Query: 227 DKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSL 286
++ + SE G +T ++T VY+ N ++ + L + F
Sbjct: 274 SRKDRE-----------SELGAQTR---------EFTNVYIKNFGEDMDEDRLSKIFEKF 313
Query: 287 GAGVIEEVRVQRD-----KGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQM 333
G + V+V RD KGFGFV + H +A AI N + L G+Q+
Sbjct: 314 GPTL--SVKVMRDDCGRSKGFGFVNFQKHEDAQNAIDNMNGKE---LNGRQI 360
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 75/337 (22%), Positives = 134/337 (39%), Gaps = 40/337 (11%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKD---KSSYGFIHYFDRRSAAMAILSL 114
+VY+ N + E L ++F GP K++R D +GF+++ A AI ++
Sbjct: 291 NVYIKNFGEDMDEDRLSKIFEKFGPTLSVKVMRDDCGRSKGFGFVNFQKHEDAQNAIDNM 350
Query: 115 NGRHLFGQPIKVNWAYASGQRE-DTSGHF--------------NIFVGDLSPEVTDATLF 159
NG+ L G+ I A +R+ HF N+++ +L ++ D L
Sbjct: 351 NGKELNGRQIYAGRAQKKLERQTQLQRHFEQLKQNRIVRYQGVNLYIKNLDDDIDDENLR 410
Query: 160 ACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT 219
FS + + + A+VM + GRS+GFGFV F ++A +A+ ++ G+ + S+ + A
Sbjct: 411 KEFSSFGTITSAKVMMN--NGRSKGFGFVCFSAPEEATTAVTEMNGRLVASKPLYVALAQ 468
Query: 220 KGA------GNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPE 273
+ N ++ + +S T G G + P Q Y +P
Sbjct: 469 RKEERKAHLANQYVQRMARIRSTATPTLGPYRTGASSRYFFTPLTQSQSRGAY---YSPN 525
Query: 274 VTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQM 333
HF L + + R F + H + + M + S+ +++
Sbjct: 526 --------HFAQLRSSPHWSAQRVRSHSFQTITGPIHPKFCRSPLMSTSHMSTSRISRRI 577
Query: 334 KCSWGSKPTPPGTSSNPLPPPAAAPIPGLSAADLLAY 370
+ T P + PL PP IP L + Y
Sbjct: 578 TT---QRVTSPAHTLRPLCPPGTTFIPTLRSTQQYKY 611
>gi|218191015|gb|EEC73442.1| hypothetical protein OsI_07730 [Oryza sativa Indica Group]
Length = 312
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 89/285 (31%), Positives = 135/285 (47%), Gaps = 39/285 (13%)
Query: 68 VTEPLLQEVFSSTGPVEGCKLIRKDKSS----YGFIHYFDRRSAAMAILSLNGRHLF--- 120
+ E L F +G V K+IR S YGF+ +F SA A+ + +G H+
Sbjct: 1 MDEGYLHNCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFFSHASAEKALQNFSG-HVMPNT 59
Query: 121 GQPIKVNWA-YASGQ-REDTSGHFNIFVGDLSPEVTDATLFACFSV-YPSCSDARVMWDQ 177
+ K+NWA Y+ G+ R + + +IFVGDL+ +VTD L F+ Y S A+V+ D
Sbjct: 60 DRAFKLNWASYSMGEKRSELASDHSIFVGDLAVDVTDEMLMDLFAKKYRSVKGAKVIIDA 119
Query: 178 KTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVV 237
TGRSRG+GFV F + D A+ ++ G + +R IR AT + + S +S
Sbjct: 120 NTGRSRGYGFVRFGDDNDKTHAMTEMNGAYCSTRPIRIGPATPRRSSGDSGSSPPRQSDS 179
Query: 238 ELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQ 297
+ TN T+YVG L P T+ +L + F G + V++
Sbjct: 180 DSTN---------------------RTIYVGGLDPNATEDELRKAFAKYGD--LASVKIP 216
Query: 298 RDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQ-MKCSWGSKP 341
K GFV++ +A A+Q N + GKQ ++ SWG P
Sbjct: 217 VGKQCGFVQFVNRPDAEEALQGLNGST----IGKQAVRLSWGRSP 257
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 82/177 (46%), Gaps = 22/177 (12%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSST-GPVEGCKLIRKDKSS----YGFIHYFDRRSAAMAIL 112
S++VG++ VT+ +L ++F+ V+G K+I + YGF+ + D A+
Sbjct: 84 SIFVGDLAVDVTDEMLMDLFAKKYRSVKGAKVIIDANTGRSRGYGFVRFGDDNDKTHAMT 143
Query: 113 SLNGRHLFGQPIKVNWA-----------YASGQREDTSGHFNIFVGDLSPEVTDATLFAC 161
+NG + +PI++ A Q + S + I+VG L P T+ L
Sbjct: 144 EMNGAYCSTRPIRIGPATPRRSSGDSGSSPPRQSDSDSTNRTIYVGGLDPNATEDELRKA 203
Query: 162 FSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWA 218
F+ Y + ++ ++ G FV F N+ DA+ A+ L G +G + +R +W
Sbjct: 204 FAKYGDLASVKIPVGKQCG------FVQFVNRPDAEEALQGLNGSTIGKQAVRLSWG 254
>gi|318087014|gb|ADV40099.1| TIA-1-like protein [Latrodectus hesperus]
Length = 166
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 55/134 (41%), Positives = 86/134 (64%), Gaps = 3/134 (2%)
Query: 57 RSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRK-DKSSYGFIHYFDRRSAAMAILSLN 115
+++YVGN+ VTE L+ +F GPV+G K+I++ Y F+ + D +SAA A+L++N
Sbjct: 30 KTLYVGNLDPTVTEELILALFGQIGPVKGYKIIQEPGNDPYCFVEFTDHQSAAAALLAMN 89
Query: 116 GRHLFGQPIKVNWAYASGQ--REDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARV 173
R+ G+ +KVNWA + ++DTS H++IFVGDLSPE+ A L F+ + SD RV
Sbjct: 90 HRNCLGKEMKVNWATSPSNTPKQDTSKHYHIFVGDLSPEIETAQLREAFAPFGEISDCRV 149
Query: 174 MWDQKTGRSRGFGF 187
+ D +T +S+ G
Sbjct: 150 VRDPQTLKSKAMGL 163
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 41/181 (22%), Positives = 74/181 (40%), Gaps = 45/181 (24%)
Query: 124 IKVNWAYASGQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSR 183
IK + A ++ ++ + S ++VG+L P VT+ + A F +++ Q+ G
Sbjct: 12 IKYDSAMSNKEQSNESHPKTLYVGNLDPTVTEELILALFGQIGPVKGYKII--QEPGND- 68
Query: 184 GFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGS 243
+ FV F + Q A +A+ + + ++++ NWAT
Sbjct: 69 PYCFVEFTDHQSAAAALLAMNHRNCLGKEMKVNWAT------------------------ 104
Query: 244 SEDGKETTNTEAPENNPQYTT-----VYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQR 298
+P N P+ T ++VG+L+PE+ L F G I + RV R
Sbjct: 105 -----------SPSNTPKQDTSKHYHIFVGDLSPEIETAQLREAFAPFGE--ISDCRVVR 151
Query: 299 D 299
D
Sbjct: 152 D 152
Score = 42.0 bits (97), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 51/103 (49%), Gaps = 14/103 (13%)
Query: 243 SSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDKG- 301
S+ KE +N P+ T+YVGNL P VT+ + F +G ++ ++ ++ G
Sbjct: 16 SAMSNKEQSNESHPK------TLYVGNLDPTVTEELILALFGQIGP--VKGYKIIQEPGN 67
Query: 302 --FGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSKPT 342
+ FV ++ H AA A+ N GK+MK +W + P+
Sbjct: 68 DPYCFVEFTDHQSAAAALLAMNHRNC---LGKEMKVNWATSPS 107
>gi|384244508|gb|EIE18010.1| hypothetical protein COCSUDRAFT_31894 [Coccomyxa subellipsoidea
C-169]
Length = 407
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 81/303 (26%), Positives = 147/303 (48%), Gaps = 21/303 (6%)
Query: 57 RSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS----YGFIHYFDRRSAAMAIL 112
+++++G++ + E + +F TG + K+IR ++ YGF+ + +A +
Sbjct: 11 KTLWMGDLAYWMDESFIYSIFVGTGNLVSVKIIRNKNTAVSEGYGFVEFATHEAAEQVLR 70
Query: 113 SLNGRHL--FGQPIKVNWAYASGQREDTSGHFNIFVGDLSPEVTDATLFACFS-VYPSCS 169
+ NG + Q ++NWA + T +++FVGDL+P+VTD L F + S
Sbjct: 71 TFNGCPIPNTDQIFRLNWAAFGVGKVTTDSDYSVFVGDLAPDVTDYALQEHFRQFFASVR 130
Query: 170 DARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNN---- 225
A+V+ D TGRS+G+GFV F N+ + ++ +++G + SR IR + AT
Sbjct: 131 SAKVITDPLTGRSKGYGFVRFGNEAERDRSLTEMSGHVINSRPIRVSIATAKKSQTATML 190
Query: 226 -EDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFH 284
+ Q+ D ++ G+ + + +P TT+++G L+ V++ DL F
Sbjct: 191 PKQCQNFDFENFRLRVQGAP--APVASQPHPSDYDPNNTTLFIGGLSSGVSEDDLRVLFG 248
Query: 285 SLGAGVIEEVRVQRDKGFGFVRYSTH--AEAALAIQMGNTTQSSY---LFGKQMKCSWGS 339
G I ++ KG GFV++ AE+A+A + S + L G ++ SWG
Sbjct: 249 RFGD--IVYTKIPPGKGCGFVQFVQRPAAESAMAQMQARCSPSLFGQILGGSTIRISWGR 306
Query: 340 KPT 342
T
Sbjct: 307 SST 309
>gi|145347251|ref|XP_001418087.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144578315|gb|ABO96380.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 319
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 63/177 (35%), Positives = 100/177 (56%), Gaps = 10/177 (5%)
Query: 50 GFDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS-----YGFIHYFDR 104
G D + +VYVGN+ QVTE +L E+F GPV + KD+ + YGF+ + +
Sbjct: 22 GADRNAEATVYVGNLDPQVTEEVLWELFLQAGPVTNV-YVPKDRVTSTHQGYGFVEFRNE 80
Query: 105 RSAAMAILSLNGRHLFGQPIKVNWAYASGQREDTSGHFNIFVGDLSPEVTDATLFACFSV 164
A I LN LFG+PIKVN + G R D G N+F+G+L P++ + L+ FS
Sbjct: 81 EDAEYGIKILNMVKLFGKPIKVNKSV--GDRRDEVGA-NLFIGNLDPDIDEKLLYDTFSA 137
Query: 165 YPSCSDA-RVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATK 220
+ + ++M D G S+GFGFV++ + + + +AI + G++L ++QI +A K
Sbjct: 138 FGVVINTPKIMRDPDNGASKGFGFVAYDSFEASDAAIEAMNGQFLCNKQINVQYAYK 194
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 91/210 (43%), Gaps = 45/210 (21%)
Query: 137 DTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDA 196
D + ++VG+L P+VT+ L+ F ++ V D+ T +G+GFV FRN++DA
Sbjct: 24 DRNAEATVYVGNLDPQVTEEVLWELFLQAGPVTNVYVPKDRVTSTHQGYGFVEFRNEEDA 83
Query: 197 QSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAP 256
+ I L L + I+ N K G+ D+ ++
Sbjct: 84 EYGIKILNMVKLFGKPIKVN---KSVGDRRDEVGAN------------------------ 116
Query: 257 ENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRD------KGFGFVRYSTH 310
+++GNL P++ + L+ F + G VI ++ RD KGFGFV Y +
Sbjct: 117 --------LFIGNLDPDIDEKLLYDTFSAFGV-VINTPKIMRDPDNGASKGFGFVAYDSF 167
Query: 311 AEAALAIQMGNTTQSSYLFGKQMKCSWGSK 340
+ AI+ N +L KQ+ + K
Sbjct: 168 EASDAAIEAMN---GQFLCNKQINVQYAYK 194
>gi|302511659|ref|XP_003017781.1| hypothetical protein ARB_04665 [Arthroderma benhamiae CBS 112371]
gi|291181352|gb|EFE37136.1| hypothetical protein ARB_04665 [Arthroderma benhamiae CBS 112371]
Length = 428
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 93/308 (30%), Positives = 141/308 (45%), Gaps = 36/308 (11%)
Query: 61 VGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS----YGFIHYFDRRSAAMAILSLNG 116
+G + + E ++ ++ G K+IR S Y F+ F +AA L++NG
Sbjct: 85 MGELEGWIDENFIRNIWYQMGEQVNVKMIRDKFSGANAGYCFVD-FASPAAAAKALAVNG 143
Query: 117 RHLFG--QPIKVNWAYASG----QREDTSGHFNIFVGDLSPEVTDATLFACF-SVYPSCS 169
+ +P K+NWA G RE+ F+IFVGDL PEV + L + F S +PSC
Sbjct: 144 TPMPNTQRPFKLNWASGGGLADRSREERGPEFSIFVGDLGPEVNEYVLVSLFQSRFPSCK 203
Query: 170 DARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT------KGAG 223
A++M D TG SRG+GFV F ++ D Q A++++ G + G+R +R + AT G G
Sbjct: 204 SAKIMTDPITGLSRGYGFVRFSDETDQQRALSEMQGVYCGNRPMRISTATPKNKGPAGPG 263
Query: 224 NNEDKQSSDAKSVVELTNGSSEDGKETTNTE--------APE-----NNPQYTTVYVGNL 270
G AP+ +P TTV+VG L
Sbjct: 264 GPAHMGVPGGPPGGMYPPSMGGAGGPPGPGGPQMGYYGAAPQPMNQFTDPNNTTVFVGGL 323
Query: 271 APEVTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFG 330
+ VT+ +L F G G I V++ KG GFV++ A +AI N Q +
Sbjct: 324 SGYVTEDELRSFFQ--GFGEITYVKIPPGKGCGFVQFVQRHAAEMAI---NQMQGYPIGN 378
Query: 331 KQMKCSWG 338
+++ SWG
Sbjct: 379 SRVRLSWG 386
>gi|167519406|ref|XP_001744043.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163778005|gb|EDQ91621.1| predicted protein [Monosiga brevicollis MX1]
Length = 563
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 85/292 (29%), Positives = 128/292 (43%), Gaps = 50/292 (17%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS----YGFIHYFDRRSAAMAILS 113
S+YVG++H +VTE L E FS G V ++ R S Y +++Y A A+
Sbjct: 9 SLYVGDLHPEVTEATLYEFFSQMGSVISIRVCRDAVSRQSLGYAYVNYQQHADAKHALEE 68
Query: 114 LNGRHLFGQPIKVNWAYASGQRE---DTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSD 170
LN + +P ++ WA QR SG NIF+ +L+ E+ + L+ FS + +
Sbjct: 69 LNFEKIHDKPCRIMWA----QRNPAARRSGAGNIFIKNLNKEIDNKALYDTFSAFGTILS 124
Query: 171 ARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQS 230
+V D+K G SRG+GFV F ++DAQ AI+ + GK L
Sbjct: 125 CKVAADEK-GESRGYGFVHFEKEEDAQKAIDTVNGKML---------------------- 161
Query: 231 SDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPE-VTQLDLHRHFHSLG-- 287
K VV +T S +E + YT +YV NL T DL + F G
Sbjct: 162 --LKQVVTVTKFLSRKEREQ------QGGRTYTNIYVKNLPDSYATNDDLKKLFEKFGTI 213
Query: 288 -AGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGN----TTQSSYLFGKQMK 334
+ + + + +GFGFV + A A++ N T G+ MK
Sbjct: 214 TSTFLAKDENDKSRGFGFVNFENSEAANAAVEAMNEKEIETDRKLFVGRAMK 265
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 133/283 (46%), Gaps = 36/283 (12%)
Query: 52 DPSTCRS----VYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS---YGFIHYFDR 104
+P+ RS +++ N++ ++ L + FS+ G + CK+ +K YGF+H+
Sbjct: 87 NPAARRSGAGNIFIKNLNKEIDNKALYDTFSAFGTILSCKVAADEKGESRGYGFVHFEKE 146
Query: 105 RSAAMAILSLNGRHLFGQPIKVNWAYASGQREDTSG--HFNIFVGDL-SPEVTDATLFAC 161
A AI ++NG+ L Q + V + +RE G + NI+V +L T+ L
Sbjct: 147 EDAQKAIDTVNGKMLLKQVVTVTKFLSRKEREQQGGRTYTNIYVKNLPDSYATNDDLKKL 206
Query: 162 FSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGS-RQIRCNWATK 220
F + + + + D+ +SRGFGFV+F N + A +A+ + K + + R++ A K
Sbjct: 207 FEKFGTITSTFLAKDE-NDKSRGFGFVNFENSEAANAAVEAMNEKEIETDRKLFVGRAMK 265
Query: 221 GAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLH 280
+ ++ + K + + ++ + +N +Y+ +L +VT+ L
Sbjct: 266 -----KHERERELKRIHDKIRQERDEKNKNSN------------LYIKHLPEDVTEDALR 308
Query: 281 RHFHSLGAGVIEEVRVQRD-----KGFGFVRYSTHAEAALAIQ 318
F G I +++ D +GFGFV + + EAA AIQ
Sbjct: 309 DKFSKF--GTITSLKIMTDNNGDSRGFGFVNFDSADEAAAAIQ 349
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 92/186 (49%), Gaps = 21/186 (11%)
Query: 55 TCRSVYVGNI-HTQVTEPLLQEVFSSTGPVEGCKLIR--KDKSS-YGFIHYFDRRSAAMA 110
T ++YV N+ + T L+++F G + L + DKS +GF+++ + +A A
Sbjct: 184 TYTNIYVKNLPDSYATNDDLKKLFEKFGTITSTFLAKDENDKSRGFGFVNFENSEAANAA 243
Query: 111 ILSLN------GRHLF-GQPIKVNWAYAS---------GQREDTSGHFNIFVGDLSPEVT 154
+ ++N R LF G+ +K + +R++ + + N+++ L +VT
Sbjct: 244 VEAMNEKEIETDRKLFVGRAMKKHERERELKRIHDKIRQERDEKNKNSNLYIKHLPEDVT 303
Query: 155 DATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIR 214
+ L FS + + + ++M D G SRGFGFV+F + +A +AI ++ G + + +
Sbjct: 304 EDALRDKFSKFGTITSLKIMTDN-NGDSRGFGFVNFDSADEAAAAIQEMHGSMIDGKPLY 362
Query: 215 CNWATK 220
A +
Sbjct: 363 VALALR 368
Score = 43.5 bits (101), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 37/64 (57%), Gaps = 8/64 (12%)
Query: 261 QYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDK------GFGFVRYSTHAEAA 314
Q ++YVG+L PEVT+ L+ F +G+ + +RV RD G+ +V Y HA+A
Sbjct: 6 QNASLYVGDLHPEVTEATLYEFFSQMGSVI--SIRVCRDAVSRQSLGYAYVNYQQHADAK 63
Query: 315 LAIQ 318
A++
Sbjct: 64 HALE 67
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 42/82 (51%), Gaps = 3/82 (3%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRK---DKSSYGFIHYFDRRSAAMAILSL 114
++Y+ ++ VTE L++ FS G + K++ D +GF+++ AA AI +
Sbjct: 292 NLYIKHLPEDVTEDALRDKFSKFGTITSLKIMTDNNGDSRGFGFVNFDSADEAAAAIQEM 351
Query: 115 NGRHLFGQPIKVNWAYASGQRE 136
+G + G+P+ V A R+
Sbjct: 352 HGSMIDGKPLYVALALRKVDRQ 373
>gi|210075649|ref|XP_502423.2| YALI0D04917p [Yarrowia lipolytica]
gi|199425763|emb|CAG80611.2| YALI0D04917p [Yarrowia lipolytica CLIB122]
Length = 430
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 91/311 (29%), Positives = 142/311 (45%), Gaps = 39/311 (12%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSST-GPVEG--CKLIRK---DKSSYGFIHYFDRRSAAMAI 111
++Y+G++ + E ++ +++ GP KLIR D +YGFI + AA A
Sbjct: 3 TIYMGDLEPWMDEAAIKNMWAQVMGPDTNINVKLIRDKFTDSINYGFIDFASPELAAAA- 61
Query: 112 LSLNGRHLFGQPIKVNWAYASGQREDTSGHFNIFVGDLSPEVTDATLFACF-SVYPSCSD 170
L NG+ + G +G + F+IFVGDL+PE T+ L F S Y SC
Sbjct: 62 LKFNGKPIPGTDRLFKLGEDNG--DGAPVEFSIFVGDLAPESTEPELLQAFKSRYESCRA 119
Query: 171 ARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQS 230
A++M D TG SRG+GFV F +++D Q A+ ++ G LGSR +R + AT ++
Sbjct: 120 AKIMTDPVTGLSRGYGFVRFSSEEDQQKALQEMQGYMLGSRPLRVSTATPKNRHHHQPYM 179
Query: 231 SDAKSVVELTNGSSEDGKETTNTEAPENNPQY----------------------TTVYVG 268
+ + + P P + TTV+VG
Sbjct: 180 QFQPQQFQPPAHYQQLHSQHPFPHHPNGAPSHQVHQPFYGGPAHPLNQFTDANNTTVFVG 239
Query: 269 NLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYL 328
L+ V++ +L ++F G G I V++ KG GFV+Y A +AI T Y
Sbjct: 240 GLSSSVSEDELRQYFQ--GFGDITYVKIPPGKGCGFVQYVQRQSAEMAI----TQMQGYP 293
Query: 329 FGK-QMKCSWG 338
G +++ SWG
Sbjct: 294 IGNGRVRLSWG 304
Score = 38.9 bits (89), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 39/78 (50%), Gaps = 2/78 (2%)
Query: 51 FDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSSYGFIHYFDRRSAAMA 110
F + +V+VG + + V+E L++ F G + K+ GF+ Y R+SA MA
Sbjct: 228 FTDANNTTVFVGGLSSSVSEDELRQYFQGFGDITYVKI--PPGKGCGFVQYVQRQSAEMA 285
Query: 111 ILSLNGRHLFGQPIKVNW 128
I + G + ++++W
Sbjct: 286 ITQMQGYPIGNGRVRLSW 303
>gi|355724189|gb|AES08142.1| TIA1 cytotoxic granule-associated RNA binding protein [Mustela
putorius furo]
Length = 261
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/171 (39%), Positives = 95/171 (55%), Gaps = 18/171 (10%)
Query: 170 DARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQ 229
DARV+ D TG+S+G+GFVSF N+ DA++AI + G+WLG RQIR NWAT+ +
Sbjct: 10 DARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAPKSTY 69
Query: 230 SSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAG 289
S+ K + S D E N +P N TVY G + +T+ + + F G
Sbjct: 70 ESNTKQL-------SYD--EVVNQSSPSN----CTVYCGGVTSGLTEQLMRQTFSPFGQ- 115
Query: 290 VIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSK 340
I E+RV DKG+ FVR+++H AA AI N T + G +KC WG +
Sbjct: 116 -IMEIRVFPDKGYSFVRFNSHESAAHAIVSVNGTT---IEGHVVKCYWGKE 162
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 33/144 (22%), Positives = 63/144 (43%), Gaps = 25/144 (17%)
Query: 96 YGFIHYFDRRSAAMAILSLNGRHLFGQPIKVNWA----------YASGQR---------E 136
YGF+ +F++ A AI + G+ L G+ I+ NWA Y S + +
Sbjct: 25 YGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAPKSTYESNTKQLSYDEVVNQ 84
Query: 137 DTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDA 196
+ + ++ G ++ +T+ + FS + + RV D +G+ FV F + + A
Sbjct: 85 SSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPD------KGYSFVRFNSHESA 138
Query: 197 QSAINDLTGKWLGSRQIRCNWATK 220
AI + G + ++C W +
Sbjct: 139 AHAIVSVNGTTIEGHVVKCYWGKE 162
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 3/77 (3%)
Query: 53 PSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSSYGFIHYFDRRSAAMAIL 112
PS C +VY G + + +TE L+++ FS G + ++ DK Y F+ + SAA AI+
Sbjct: 87 PSNC-TVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVF-PDK-GYSFVRFNSHESAAHAIV 143
Query: 113 SLNGRHLFGQPIKVNWA 129
S+NG + G +K W
Sbjct: 144 SVNGTTIEGHVVKCYWG 160
>gi|157125851|ref|XP_001654419.1| polyadenylate-binding protein [Aedes aegypti]
gi|157125853|ref|XP_001654420.1| polyadenylate-binding protein [Aedes aegypti]
gi|94468824|gb|ABF18261.1| polyadenylate-binding protein [Aedes aegypti]
gi|108873484|gb|EAT37709.1| AAEL010318-PB [Aedes aegypti]
gi|108873485|gb|EAT37710.1| AAEL010318-PA [Aedes aegypti]
Length = 628
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 82/280 (29%), Positives = 128/280 (45%), Gaps = 32/280 (11%)
Query: 52 DPSTCRS----VYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS---YGFIHYFDR 104
DPS +S V++ N+ + + + FS+ G + CK+ + +K + YGF+H+
Sbjct: 81 DPSLRKSGVGNVFIKNLDKNIDNKAMYDTFSAFGNILSCKVAQDEKGNSKGYGFVHFETE 140
Query: 105 RSAAMAILSLNGRHLFGQPIKVNWAYASGQREDTSGH-----FNIFVGDLSPEVTDATLF 159
SA +I +NG L G+ + V +RE G N++V + E+ D TL
Sbjct: 141 ESANTSIEKVNGMLLNGKKVYVGRFIPRKEREKELGEKAKLFTNVYVKNFGDELNDETLK 200
Query: 160 ACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT 219
F Y + + RVM K G+SRGFGFV+F N + A+ A+ +L GK LG +I +
Sbjct: 201 EMFEKYGTITSHRVMI--KDGKSRGFGFVAFENPESAEHAVQELNGKELGEGKIL--YVG 256
Query: 220 KGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDL 279
+ NE + +EL + E Q +YV NL + L
Sbjct: 257 RAQKKNERQ--------MELKRRFEQLKMERL------TRYQGVNLYVKNLDDSIDDERL 302
Query: 280 HRHFHSLGAGVIEEVRVQ--RDKGFGFVRYSTHAEAALAI 317
+ F G +V ++ R KGFGFV +S EA A+
Sbjct: 303 RKEFSPFGTITSAKVMLEEGRSKGFGFVCFSAAEEATKAV 342
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/273 (24%), Positives = 121/273 (44%), Gaps = 41/273 (15%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIR----KDKSSYGFIHYFDRRSAAMAILS 113
S+YVG++H +TE +L E FSS GPV ++ R + Y ++++ A A+ +
Sbjct: 3 SLYVGDLHADITEAILFEKFSSAGPVLSIRVCRDVVTRRSLGYAYVNFQQPADAERALDT 62
Query: 114 LNGRHLFGQPIKVNWAYASGQREDT---SGHFNIFVGDLSPEVTDATLFACFSVYPSCSD 170
+N + G+PI++ W+ QR+ + SG N+F+ +L + + ++ FS + +
Sbjct: 63 MNFDLIKGRPIRIMWS----QRDPSLRKSGVGNVFIKNLDKNIDNKAMYDTFSAFGNILS 118
Query: 171 ARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQS 230
+V D+K G S+G+GFV F ++ A ++I + G L +++
Sbjct: 119 CKVAQDEK-GNSKGYGFVHFETEESANTSIEKVNGMLLNGKKVYVGRFIP---------- 167
Query: 231 SDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGV 290
++ E E +T VYV N E+ L F G
Sbjct: 168 -----------------RKEREKELGEKAKLFTNVYVKNFGDELNDETLKEMFEKYGTIT 210
Query: 291 IEEVRVQ--RDKGFGFVRYSTHAEAALAIQMGN 321
V ++ + +GFGFV + A A+Q N
Sbjct: 211 SHRVMIKDGKSRGFGFVAFENPESAEHAVQELN 243
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 97/191 (50%), Gaps = 24/191 (12%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRRSAAMAILSLN 115
+VYV N ++ + L+E+F G + +++ KD S +GF+ + + SA A+ LN
Sbjct: 184 NVYVKNFGDELNDETLKEMFEKYGTITSHRVMIKDGKSRGFGFVAFENPESAEHAVQELN 243
Query: 116 GRHL-FGQPIKVNWAYASGQRE-DTSGHF--------------NIFVGDLSPEVTDATLF 159
G+ L G+ + V A +R+ + F N++V +L + D L
Sbjct: 244 GKELGEGKILYVGRAQKKNERQMELKRRFEQLKMERLTRYQGVNLYVKNLDDSIDDERLR 303
Query: 160 ACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT 219
FS + + + A+VM ++ GRS+GFGFV F ++A A+ ++ G+ +GS+ + A
Sbjct: 304 KEFSPFGTITSAKVMLEE--GRSKGFGFVCFSAAEEATKAVTEMNGRIVGSKPLYVALAQ 361
Query: 220 KGAGNNEDKQS 230
+ ED+++
Sbjct: 362 R----KEDRKA 368
>gi|332208761|ref|XP_003253477.1| PREDICTED: polyadenylate-binding protein 1-like [Nomascus
leucogenys]
Length = 590
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 83/279 (29%), Positives = 130/279 (46%), Gaps = 43/279 (15%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIR----KDKSSYGFIHYFDRRSAAMAILS 113
S+YVG++H VTE +L E FS GP+ ++ R + Y +I++ A A+ +
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADAERALDT 71
Query: 114 LNGRHLFGQPIKVNWAYAS-GQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDAR 172
+N L GQPI++ W+ G R+ SG NIF+ +L + + L+ FS + + +
Sbjct: 72 MNFEMLKGQPIRIMWSQRDPGLRK--SGVGNIFIKNLEDSIDNKALYDTFSTFGNILSCK 129
Query: 173 VMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSSD 232
V D+ SRGFGFV F + AQ AIN + G L R++ G+ + ++ +
Sbjct: 130 VACDEHG--SRGFGFVHFETHEAAQQAINTMNGMLLNDRKV-------FVGHFKSRRERE 180
Query: 233 AKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIE 292
A EL + E +T +YV NL +V + L F G +
Sbjct: 181 A----ELGARALE----------------FTNIYVKNLPVDVDEQGLQDLFSQFGKML-- 218
Query: 293 EVRVQRD-----KGFGFVRYSTHAEAALAIQMGNTTQSS 326
V+V RD + FGFV + H EA A+ N + S
Sbjct: 219 SVKVMRDNSGHSRCFGFVNFEKHEEAQKAVVHMNGKEVS 257
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 86/179 (48%), Gaps = 8/179 (4%)
Query: 49 PGFDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRRS 106
PG S ++++ N+ + L + FS+ G + CK+ + S +GF+H+ +
Sbjct: 91 PGLRKSGVGNIFIKNLEDSIDNKALYDTFSTFGNILSCKVACDEHGSRGFGFVHFETHEA 150
Query: 107 AAMAILSLNGRHLFGQPIKVNWAYASGQREDTSG-----HFNIFVGDLSPEVTDATLFAC 161
A AI ++NG L + + V + +RE G NI+V +L +V + L
Sbjct: 151 AQQAINTMNGMLLNDRKVFVGHFKSRREREAELGARALEFTNIYVKNLPVDVDEQGLQDL 210
Query: 162 FSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATK 220
FS + +VM D +G SR FGFV+F ++AQ A+ + GK + R + A K
Sbjct: 211 FSQFGKMLSVKVMRD-NSGHSRCFGFVNFEKHEEAQKAVVHMNGKEVSGRLLYAGRAQK 268
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/83 (25%), Positives = 44/83 (53%), Gaps = 3/83 (3%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDK---SSYGFIHYFDRRSAAMAILSL 114
++YV N+ V E LQ++FS G + K++R + +GF+++ A A++ +
Sbjct: 192 NIYVKNLPVDVDEQGLQDLFSQFGKMLSVKVMRDNSGHSRCFGFVNFEKHEEAQKAVVHM 251
Query: 115 NGRHLFGQPIKVNWAYASGQRED 137
NG+ + G+ + A +R++
Sbjct: 252 NGKEVSGRLLYAGRAQKRMERQN 274
>gi|358346231|ref|XP_003637173.1| Polyadenylate-binding protein [Medicago truncatula]
gi|355503108|gb|AES84311.1| Polyadenylate-binding protein [Medicago truncatula]
Length = 622
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 79/277 (28%), Positives = 131/277 (47%), Gaps = 48/277 (17%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKS----SYGFIHYFDRRSAAMAILS 113
S+YVG++ V + L ++FS PV ++ R + YG+++Y + R AA A+ +
Sbjct: 26 SLYVGDLQGNVNDAQLYDLFSQIAPVISVRVCRDQMTQSSLGYGYVNYSNARDAANAMEN 85
Query: 114 LNGRHLFGQPIKVNWAYASGQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARV 173
LN L G+PI++ +++ T G N+F+ +L + + L FSV+ + +V
Sbjct: 86 LNYVPLNGKPIRIMFSHRDPLIRKT-GFANLFIKNLETSIDNKALHETFSVFGNVLSCKV 144
Query: 174 MWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSSDA 233
D G S+G GFV F N Q A++AI L G+ + +++ +
Sbjct: 145 AMDS-NGHSKGHGFVQFDNDQSAKNAIEKLDGRLMNDKKVYVGY---------------- 187
Query: 234 KSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEE 293
V SS P++T VYV NL+ T DL + F++ GVI
Sbjct: 188 --FVRCQERSS---------------PKFTNVYVKNLSESYTNEDLKQLFNTF--GVITS 228
Query: 294 VRVQRD-----KGFGFVRYSTHAEAALAIQM--GNTT 323
V++ +D K FGFV + + AA A++ G+TT
Sbjct: 229 VKIMKDENGNSKRFGFVNFQSSDSAATAVEKLNGSTT 265
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 91/182 (50%), Gaps = 20/182 (10%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS---YGFIHYFDRRSAAMAILSL 114
+VYV N+ T L+++F++ G + K+++ + + +GF+++ SAA A+ L
Sbjct: 201 NVYVKNLSESYTNEDLKQLFNTFGVITSVKIMKDENGNSKRFGFVNFQSSDSAATAVEKL 260
Query: 115 NGRHLF-GQPIKVNWAYASGQREDTSGHF---------------NIFVGDLSPEVTDATL 158
NG G+ + V A +RE F N+++ ++ + + L
Sbjct: 261 NGSTTNDGKVLFVGRAQKKSEREAELKAFFEQEKLKRYEKFQGANLYLKNIDKSLNEEKL 320
Query: 159 FACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWA 218
FS + + + +VM D + GRS+G GFV+F ++A AI+++ GK +G + + + A
Sbjct: 321 KELFSEFGTITSCKVMSDAR-GRSKGVGFVAFTTPEEASKAIDEMNGKIIGQKPVYVSVA 379
Query: 219 TK 220
+
Sbjct: 380 QR 381
Score = 42.7 bits (99), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 43/82 (52%), Gaps = 3/82 (3%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLI---RKDKSSYGFIHYFDRRSAAMAILSL 114
++Y+ NI + E L+E+FS G + CK++ R GF+ + A+ AI +
Sbjct: 305 NLYLKNIDKSLNEEKLKELFSEFGTITSCKVMSDARGRSKGVGFVAFTTPEEASKAIDEM 364
Query: 115 NGRHLFGQPIKVNWAYASGQRE 136
NG+ + +P+ V+ A +R+
Sbjct: 365 NGKIIGQKPVYVSVAQRKEERK 386
>gi|350637619|gb|EHA25976.1| hypothetical protein ASPNIDRAFT_212792 [Aspergillus niger ATCC
1015]
Length = 403
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 91/303 (30%), Positives = 148/303 (48%), Gaps = 33/303 (10%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIR-----KDKSSYGFIHYFDRRSAAMAIL 112
++++G + + E ++ ++ G K+IR + + Y F+ F +AA L
Sbjct: 67 TLWMGELEPWIDENFVRNLWFQMGEQVNVKMIRDKFSGRSNAGYCFVD-FASPAAAAKAL 125
Query: 113 SLNGRHL--FGQPIKVNWAYASG----QREDTSGHFNIFVGDLSPEVTDATLFACF-SVY 165
SLNG + + K+NWA G R+D ++IFVGDL PEV + L + F S +
Sbjct: 126 SLNGTPMPNTNRLFKLNWATGGGLADRSRDDRGPEYSIFVGDLGPEVNEYVLVSLFQSRF 185
Query: 166 PSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNN 225
PSC A++M D +G SRG+GFV F ++ D Q A++++ G + G+R +R + AT
Sbjct: 186 PSCKSAKIMTDPISGMSRGYGFVRFSDENDQQRALSEMQGVYCGNRPMRISTATP----- 240
Query: 226 EDKQSSDAKSVVELTNGSS-----EDGKETTNTEAPE-----NNPQYTTVYVGNLAPEVT 275
++K S + G + AP+ +P TTV+VG L+ VT
Sbjct: 241 KNKGPSLGAAGAMGMPGPAGMYPPMGAPPMGFYGAPQPMNQFTDPNNTTVFVGGLSGYVT 300
Query: 276 QLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKC 335
+ +L F G G I V++ KG GFV++ A +AI N Q + +++
Sbjct: 301 EDELRSFFQ--GFGEITYVKIPPGKGCGFVQFVQRHAAEMAI---NQMQGYPIGNSRVRL 355
Query: 336 SWG 338
SWG
Sbjct: 356 SWG 358
Score = 38.1 bits (87), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 87/204 (42%), Gaps = 38/204 (18%)
Query: 140 GHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSR-GFGFVSFRNQQDAQS 198
G +++G+L P + + + + + +++ D+ +GRS G+ FV F + A
Sbjct: 64 GKTTLWMGELEPWIDENFVRNLWFQMGEQVNVKMIRDKFSGRSNAGYCFVDFASPAAAAK 123
Query: 199 AIN-DLTGKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPE 257
A++ + T +R + NWAT G L + S +D
Sbjct: 124 ALSLNGTPMPNTNRLFKLNWATGGG----------------LADRSRDD----------- 156
Query: 258 NNPQYTTVYVGNLAPEVTQLDLHRHFHSL-----GAGVIEEVRVQRDKGFGFVRYSTHAE 312
P+Y+ ++VG+L PEV + L F S A ++ + +G+GFVR+S +
Sbjct: 157 RGPEYS-IFVGDLGPEVNEYVLVSLFQSRFPSCKSAKIMTDPISGMSRGYGFVRFSDEND 215
Query: 313 AALAIQMGNTTQSSYLFGKQMKCS 336
A+ + Q Y + M+ S
Sbjct: 216 QQRAL---SEMQGVYCGNRPMRIS 236
>gi|402882426|ref|XP_003904744.1| PREDICTED: polyadenylate-binding protein 1-like [Papio anubis]
Length = 614
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 83/279 (29%), Positives = 131/279 (46%), Gaps = 43/279 (15%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIR----KDKSSYGFIHYFDRRSAAMAILS 113
S+YVG++H VTE +L E FS GP+ ++ R + Y +I++ A A+ +
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADAERALDT 71
Query: 114 LNGRHLFGQPIKVNWAYAS-GQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDAR 172
+N L GQPI++ W+ G R+ SG NIF+ +L + + L+ FS + + +
Sbjct: 72 MNFEMLKGQPIRIMWSQRDPGLRK--SGVGNIFIKNLEDSIDNKALYDTFSTFGNILSCK 129
Query: 173 VMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSSD 232
V+ D+ SRGFGFV F + AQ AIN + G L R++ G+ + ++ +
Sbjct: 130 VVCDEHG--SRGFGFVHFETHEAAQQAINTMNGMLLNDRKV-------FVGHFKSRRERE 180
Query: 233 AKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIE 292
A EL + E +T +YV NL +V + L F G +
Sbjct: 181 A----ELGARALE----------------FTNIYVKNLPVDVDEQGLQDLFSQFGKML-- 218
Query: 293 EVRVQRD-----KGFGFVRYSTHAEAALAIQMGNTTQSS 326
V+V RD + FGFV + H EA A+ N + S
Sbjct: 219 SVKVMRDNSGHSRCFGFVNFEKHEEAQKAVVHMNGKEVS 257
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 77/285 (27%), Positives = 123/285 (43%), Gaps = 33/285 (11%)
Query: 49 PGFDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRRS 106
PG S ++++ N+ + L + FS+ G + CK++ + S +GF+H+ +
Sbjct: 91 PGLRKSGVGNIFIKNLEDSIDNKALYDTFSTFGNILSCKVVCDEHGSRGFGFVHFETHEA 150
Query: 107 AAMAILSLNGRHLFGQPIKVNWAYASGQREDTSG-----HFNIFVGDLSPEVTDATLFAC 161
A AI ++NG L + + V + +RE G NI+V +L +V + L
Sbjct: 151 AQQAINTMNGMLLNDRKVFVGHFKSRREREAELGARALEFTNIYVKNLPVDVDEQGLQDL 210
Query: 162 FSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKG 221
FS + +VM D +G SR FGFV+F ++AQ A+ + GK + R + A K
Sbjct: 211 FSQFGKMLSVKVMRD-NSGHSRCFGFVNFEKHEEAQKAVVHMNGKEVSGRLLYAGRAQKR 269
Query: 222 AGN-NEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLH 280
NE K+ + L Q +YV NL + L
Sbjct: 270 VERQNELKRRFEQMKQDRL------------------RRYQGVNLYVKNLDDSIDDDKLR 311
Query: 281 RHFHSLGAGVIEEVRVQRD----KGFGFVRYSTHAEAALAIQMGN 321
+ F GVI +V + KGFGFV +S+ EA A+ N
Sbjct: 312 KEFSPY--GVITSAKVMTEGGHSKGFGFVCFSSPEEATKAVTEMN 354
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 88/181 (48%), Gaps = 20/181 (11%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDK---SSYGFIHYFDRRSAAMAILSL 114
++YV N+ V E LQ++FS G + K++R + +GF+++ A A++ +
Sbjct: 192 NIYVKNLPVDVDEQGLQDLFSQFGKMLSVKVMRDNSGHSRCFGFVNFEKHEEAQKAVVHM 251
Query: 115 NGRHLFGQPIKVNWAYASGQREDTSGH---------------FNIFVGDLSPEVTDATLF 159
NG+ + G+ + A +R++ N++V +L + D L
Sbjct: 252 NGKEVSGRLLYAGRAQKRVERQNELKRRFEQMKQDRLRRYQGVNLYVKNLDDSIDDDKLR 311
Query: 160 ACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT 219
FS Y + A+VM + G S+GFGFV F + ++A A+ ++ G+ +G++ + A
Sbjct: 312 KEFSPYGVITSAKVMTE--GGHSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQ 369
Query: 220 K 220
+
Sbjct: 370 R 370
>gi|340521165|gb|EGR51400.1| RNA-binding protein [Trichoderma reesei QM6a]
Length = 441
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 94/312 (30%), Positives = 144/312 (46%), Gaps = 38/312 (12%)
Query: 58 SVYVGNIHTQVTEPLLQEVF-SSTGPVEGCKLIRKDKSS----YGFIHYFDRRSAAMAIL 112
++++G + + E ++ VF S+ G K+IR DK+S Y F+ F AA L
Sbjct: 69 TLWMGELEPWMDENFIKGVFLSAAGETVNVKVIR-DKNSGNAGYCFVE-FATPDAATKAL 126
Query: 113 SLNGRHL--FGQPIKVNWAYASG---QREDTSGHFNIFVGDLSPEVTDATLFACFSV-YP 166
LNG + + K+NWA G +R+D ++IFVGDL PEV + L + F +P
Sbjct: 127 GLNGTPVPNSSRQFKLNWASGGGLVDRRDDRGPEYSIFVGDLGPEVNEYVLVSLFQARFP 186
Query: 167 SCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT------- 219
SC A++M D +G+SRG+GFV F ++ D Q A+ ++ G + G+R +R + AT
Sbjct: 187 SCKSAKIMTDAMSGQSRGYGFVRFSDENDQQRALVEMQGVYCGNRPMRISTATPKNRGNH 246
Query: 220 --------KGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYT-----TVY 266
Q V G N Q+T TV+
Sbjct: 247 GFGHGHQGGPMMGGGMPQQQMWGGVQAFPYGGGGAAAAGGNFNPATQMNQFTDPNNTTVF 306
Query: 267 VGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSS 326
VG L+ VT+ +L F G G I V++ KG GFV++ A +AI N Q
Sbjct: 307 VGGLSGYVTEDELRSFFQ--GFGEITYVKIPPGKGCGFVQFVHRHAAEMAI---NQMQGY 361
Query: 327 YLFGKQMKCSWG 338
+ +++ SWG
Sbjct: 362 PIGNSRVRLSWG 373
>gi|393907830|gb|EFO21360.2| hypothetical protein LOAG_07126 [Loa loa]
Length = 317
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 112/208 (53%), Gaps = 21/208 (10%)
Query: 135 REDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQ 194
+ +T+ +F++FVGDL+ EV TL A F + S+A+V+ D +T +S+ +GFVSF ++
Sbjct: 124 KVNTNKNFHVFVGDLATEVDSCTLKAAFESFGEISEAKVIRDPQTLKSKSYGFVSFAVKE 183
Query: 195 DAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTE 254
+A+ AI + G+ +G R IR NWA + E+ ++ T + + TN
Sbjct: 184 NAEKAIEKMNGQMIGRRPIRTNWAVRRFDGGEE------YAMKPPTYDNIFNATHATN-- 235
Query: 255 APENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAA 314
T+VYVG ++P T +L + F ++ + EVR+ + +G+ FVRY T A
Sbjct: 236 --------TSVYVGGISPATTDEELMQPFSAIAT--VTEVRLFKQQGYAFVRYLTKDAAT 285
Query: 315 LAIQMGNTTQSSYLFGKQMKCSWGSKPT 342
AI + + + G+++KCSW T
Sbjct: 286 RAIMFMHGKE---INGQKIKCSWSRTVT 310
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 88/180 (48%), Gaps = 26/180 (14%)
Query: 59 VYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKS----SYGFIHYFDRRSAAMAILSL 114
V+VG++ T+V L+ F S G + K+IR ++ SYGF+ + + +A AI +
Sbjct: 133 VFVGDLATEVDSCTLKAAFESFGEISEAKVIRDPQTLKSKSYGFVSFAVKENAEKAIEKM 192
Query: 115 NGRHLFGQPIKVNWA----------------YASGQREDTSGHFNIFVGDLSPEVTDATL 158
NG+ + +PI+ NWA Y + + + +++VG +SP TD L
Sbjct: 193 NGQMIGRRPIRTNWAVRRFDGGEEYAMKPPTYDNIFNATHATNTSVYVGGISPATTDEEL 252
Query: 159 FACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWA 218
FS + ++ R+ Q G+ FV + + A AI + GK + ++I+C+W+
Sbjct: 253 MQPFSAIATVTEVRLFKQQ------GYAFVRYLTKDAATRAIMFMHGKEINGQKIKCSWS 306
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 46/88 (52%), Gaps = 8/88 (9%)
Query: 48 PPGFDP------STCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSSYGFIHY 101
PP +D +T SVYVG I T+ L + FS+ V +L ++ Y F+ Y
Sbjct: 221 PPTYDNIFNATHATNTSVYVGGISPATTDEELMQPFSAIATVTEVRLFKQQ--GYAFVRY 278
Query: 102 FDRRSAAMAILSLNGRHLFGQPIKVNWA 129
+ +A AI+ ++G+ + GQ IK +W+
Sbjct: 279 LTKDAATRAIMFMHGKEINGQKIKCSWS 306
>gi|222641726|gb|EEE69858.1| hypothetical protein OsJ_29658 [Oryza sativa Japonica Group]
Length = 310
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 85/271 (31%), Positives = 128/271 (47%), Gaps = 40/271 (14%)
Query: 83 VEGCKLIRKDKSS----YGFIHYFDRRSAAMAILSLNGRHLF---GQPIKVNWAYAS--G 133
V K+IR ++ YGF+ ++ +A + G H+ QP ++NWA S
Sbjct: 10 VVAIKVIRNKQTGQSEGYGFVEFYSHAAAEKVLEGFAG-HIMPNTDQPFRINWASFSMGD 68
Query: 134 QREDTSGHFNIFVGDLSPEVTDATLFACFSV-YPSCSDARVMWDQKTGRSRGFGFVSFRN 192
+R D + +IFVGDL+ +V D TL FS Y S A+V+ D TGRS+G+GFV F +
Sbjct: 69 RRSDIASDHSIFVGDLASDVNDTTLLETFSKRYSSVKGAKVVIDANTGRSKGYGFVRFGD 128
Query: 193 QQDAQSAINDLTGKWLGSRQIRCNWAT-KGAGNNEDKQSSDAKSVVELTNGSSEDGKETT 251
+ A+ ++ G + +R +R AT + S A+S +LTN
Sbjct: 129 DNEKTHAMTEMNGVYCSTRPMRIGPATPRKTSGTSGPTGSAARSDGDLTN---------- 178
Query: 252 NTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHA 311
TTV+VG L P V++ DL + F G I V++ K GFV++
Sbjct: 179 -----------TTVFVGGLDPNVSEDDLRQTFSQYGE--ISSVKIPVGKQCGFVQFVQRK 225
Query: 312 EAALAIQMGNTTQSSYLFGKQ-MKCSWGSKP 341
A A+Q N + GKQ ++ SWG P
Sbjct: 226 NAEDALQGLNGS----TIGKQTVRLSWGRNP 252
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 84/184 (45%), Gaps = 23/184 (12%)
Query: 52 DPSTCRSVYVGNIHTQVTEPLLQEVFSST-GPVEGCKLIRKDKSS----YGFIHYFDRRS 106
D ++ S++VG++ + V + L E FS V+G K++ + YGF+ + D
Sbjct: 72 DIASDHSIFVGDLASDVNDTTLLETFSKRYSSVKGAKVVIDANTGRSKGYGFVRFGDDNE 131
Query: 107 AAMAILSLNGRHLFGQPIKVNWAY-----------ASGQREDTS-GHFNIFVGDLSPEVT 154
A+ +NG + +P+++ A S R D + +FVG L P V+
Sbjct: 132 KTHAMTEMNGVYCSTRPMRIGPATPRKTSGTSGPTGSAARSDGDLTNTTVFVGGLDPNVS 191
Query: 155 DATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIR 214
+ L FS Y S ++ ++ G FV F +++A+ A+ L G +G + +R
Sbjct: 192 EDDLRQTFSQYGEISSVKIPVGKQCG------FVQFVQRKNAEDALQGLNGSTIGKQTVR 245
Query: 215 CNWA 218
+W
Sbjct: 246 LSWG 249
>gi|317033242|ref|XP_001395129.2| mRNA binding post-transcriptional regulator (Csx1) [Aspergillus
niger CBS 513.88]
gi|317033244|ref|XP_003188853.1| mRNA binding post-transcriptional regulator (Csx1) [Aspergillus
niger CBS 513.88]
Length = 399
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 91/303 (30%), Positives = 148/303 (48%), Gaps = 33/303 (10%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIR-----KDKSSYGFIHYFDRRSAAMAIL 112
++++G + + E ++ ++ G K+IR + + Y F+ F +AA L
Sbjct: 67 TLWMGELEPWIDENFVRNLWFQMGEQVNVKMIRDKFSGRSNAGYCFVD-FASPAAAAKAL 125
Query: 113 SLNGRHL--FGQPIKVNWAYASG----QREDTSGHFNIFVGDLSPEVTDATLFACF-SVY 165
SLNG + + K+NWA G R+D ++IFVGDL PEV + L + F S +
Sbjct: 126 SLNGTPMPNTNRLFKLNWATGGGLADRSRDDRGPEYSIFVGDLGPEVNEYVLVSLFQSRF 185
Query: 166 PSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNN 225
PSC A++M D +G SRG+GFV F ++ D Q A++++ G + G+R +R + AT
Sbjct: 186 PSCKSAKIMTDPISGMSRGYGFVRFSDENDQQRALSEMQGVYCGNRPMRISTATP----- 240
Query: 226 EDKQSSDAKSVVELTNGSS-----EDGKETTNTEAPE-----NNPQYTTVYVGNLAPEVT 275
++K S + G + AP+ +P TTV+VG L+ VT
Sbjct: 241 KNKGPSLGAAGAMGMPGPAGMYPPMGAPPMGFYGAPQPMNQFTDPNNTTVFVGGLSGYVT 300
Query: 276 QLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKC 335
+ +L F G G I V++ KG GFV++ A +AI N Q + +++
Sbjct: 301 EDELRSFFQ--GFGEITYVKIPPGKGCGFVQFVQRHAAEMAI---NQMQGYPIGNSRVRL 355
Query: 336 SWG 338
SWG
Sbjct: 356 SWG 358
Score = 38.1 bits (87), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 87/204 (42%), Gaps = 38/204 (18%)
Query: 140 GHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSR-GFGFVSFRNQQDAQS 198
G +++G+L P + + + + + +++ D+ +GRS G+ FV F + A
Sbjct: 64 GKTTLWMGELEPWIDENFVRNLWFQMGEQVNVKMIRDKFSGRSNAGYCFVDFASPAAAAK 123
Query: 199 AIN-DLTGKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPE 257
A++ + T +R + NWAT G L + S +D
Sbjct: 124 ALSLNGTPMPNTNRLFKLNWATGGG----------------LADRSRDD----------- 156
Query: 258 NNPQYTTVYVGNLAPEVTQLDLHRHFHSL-----GAGVIEEVRVQRDKGFGFVRYSTHAE 312
P+Y+ ++VG+L PEV + L F S A ++ + +G+GFVR+S +
Sbjct: 157 RGPEYS-IFVGDLGPEVNEYVLVSLFQSRFPSCKSAKIMTDPISGMSRGYGFVRFSDEND 215
Query: 313 AALAIQMGNTTQSSYLFGKQMKCS 336
A+ + Q Y + M+ S
Sbjct: 216 QQRAL---SEMQGVYCGNRPMRIS 236
>gi|114682135|ref|XP_514668.2| PREDICTED: poly(A) binding protein, cytoplasmic 1-like isoform 2
[Pan troglodytes]
gi|397511247|ref|XP_003825989.1| PREDICTED: polyadenylate-binding protein 1-like [Pan paniscus]
Length = 614
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 83/279 (29%), Positives = 130/279 (46%), Gaps = 43/279 (15%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIR----KDKSSYGFIHYFDRRSAAMAILS 113
S+YVG++H VTE +L E FS GP+ ++ R + Y +I++ A A+ +
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADAERALDT 71
Query: 114 LNGRHLFGQPIKVNWAYAS-GQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDAR 172
+N L GQPI++ W+ G R+ SG NIF+ +L + + L+ FS + + +
Sbjct: 72 MNFEMLKGQPIRIMWSQRDPGLRK--SGVGNIFIKNLEDSIDNKALYDTFSTFGNILSCK 129
Query: 173 VMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSSD 232
V D+ SRGFGFV F + AQ AIN + G L R++ G+ + ++ +
Sbjct: 130 VACDEHG--SRGFGFVHFETHEAAQQAINTMNGMLLNDRKV-------FVGHFKSRRERE 180
Query: 233 AKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIE 292
A EL + E +T +YV NL +V + L F G +
Sbjct: 181 A----ELGARALE----------------FTNIYVKNLPVDVDEQGLQELFSQFGKML-- 218
Query: 293 EVRVQRD-----KGFGFVRYSTHAEAALAIQMGNTTQSS 326
V+V RD + FGFV + H EA A+ N + S
Sbjct: 219 SVKVMRDNSGHSRCFGFVNFEKHEEAQKAVVHMNGKEVS 257
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 77/285 (27%), Positives = 122/285 (42%), Gaps = 33/285 (11%)
Query: 49 PGFDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRRS 106
PG S ++++ N+ + L + FS+ G + CK+ + S +GF+H+ +
Sbjct: 91 PGLRKSGVGNIFIKNLEDSIDNKALYDTFSTFGNILSCKVACDEHGSRGFGFVHFETHEA 150
Query: 107 AAMAILSLNGRHLFGQPIKVNWAYASGQREDTSG-----HFNIFVGDLSPEVTDATLFAC 161
A AI ++NG L + + V + +RE G NI+V +L +V + L
Sbjct: 151 AQQAINTMNGMLLNDRKVFVGHFKSRREREAELGARALEFTNIYVKNLPVDVDEQGLQEL 210
Query: 162 FSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKG 221
FS + +VM D +G SR FGFV+F ++AQ A+ + GK + R + A K
Sbjct: 211 FSQFGKMLSVKVMRD-NSGHSRCFGFVNFEKHEEAQKAVVHMNGKEVSGRLLYAGRAQKR 269
Query: 222 AGN-NEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLH 280
NE K+ + L Q +YV NL + L
Sbjct: 270 VERQNELKRRFEQMKQDRL------------------RRYQGVNLYVKNLDDSIDDDKLR 311
Query: 281 RHFHSLGAGVIEEVRVQRD----KGFGFVRYSTHAEAALAIQMGN 321
+ F GVI +V + KGFGFV +S+ EA A+ N
Sbjct: 312 KEFSPY--GVITSAKVMTEGGHSKGFGFVCFSSPEEATKAVTEMN 354
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 88/181 (48%), Gaps = 20/181 (11%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDK---SSYGFIHYFDRRSAAMAILSL 114
++YV N+ V E LQE+FS G + K++R + +GF+++ A A++ +
Sbjct: 192 NIYVKNLPVDVDEQGLQELFSQFGKMLSVKVMRDNSGHSRCFGFVNFEKHEEAQKAVVHM 251
Query: 115 NGRHLFGQPIKVNWAYASGQREDTSGH---------------FNIFVGDLSPEVTDATLF 159
NG+ + G+ + A +R++ N++V +L + D L
Sbjct: 252 NGKEVSGRLLYAGRAQKRVERQNELKRRFEQMKQDRLRRYQGVNLYVKNLDDSIDDDKLR 311
Query: 160 ACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT 219
FS Y + A+VM + G S+GFGFV F + ++A A+ ++ G+ +G++ + A
Sbjct: 312 KEFSPYGVITSAKVMTE--GGHSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQ 369
Query: 220 K 220
+
Sbjct: 370 R 370
>gi|149023879|gb|EDL80376.1| rCG31475, isoform CRA_b [Rattus norvegicus]
Length = 656
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 131/281 (46%), Gaps = 47/281 (16%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIR----KDKSSYGFIHYFDRRSAAMAILS 113
S+YVG++H+ VTE +L E FS GPV ++ R + Y ++++ A A+ +
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 114 LNGRHLFGQPIKVNWAYASGQREDT---SGHFNIFVGDLSPEVTDATLFACFSVYPSCSD 170
+N + G+PI++ W+ QR+ + SG N+F+ +L + + L+ FS + +
Sbjct: 72 MNFDVIKGKPIRIMWS----QRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 171 ARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQS 230
+V+ D+ S+G+ FV F Q+ A AI + G L R++ G + ++
Sbjct: 128 CKVVCDENG--SKGYAFVHFETQEAANKAIEKMNGMLLNDRKVFV-------GRFKSRKE 178
Query: 231 SDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGV 290
+A EL + E +T VY+ N EV +L F G +
Sbjct: 179 REA----ELGAKAKE----------------FTNVYIKNFGEEVDDENLRELFSQFGKTL 218
Query: 291 IEEVRVQRD-----KGFGFVRYSTHAEAALAIQMGNTTQSS 326
V+V RD KGFGFV Y H +A A++ N + S
Sbjct: 219 --SVKVMRDCSGKSKGFGFVSYEKHEDANKAVEEMNGKEMS 257
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 128/279 (45%), Gaps = 31/279 (11%)
Query: 52 DPSTCRS----VYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRR 105
DPS +S V++ N+ + L + FS+ G + CK++ + S Y F+H+ +
Sbjct: 90 DPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQE 149
Query: 106 SAAMAILSLNGRHLFGQPIKVNWAYASGQREDTSG-----HFNIFVGDLSPEVTDATLFA 160
+A AI +NG L + + V + +RE G N+++ + EV D L
Sbjct: 150 AANKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDENLRE 209
Query: 161 CFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATK 220
FS + +VM D +G+S+GFGFVS+ +DA A+ ++ GK + + I A K
Sbjct: 210 LFSQFGKTLSVKVMRDC-SGKSKGFGFVSYEKHEDANKAVEEMNGKEMSGKSIFVGRAQK 268
Query: 221 GAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLH 280
++Q+ EL + +E + Q +Y+ NL + L
Sbjct: 269 KV----ERQA-------ELKRKFEQLKQERISRY------QGVNLYIKNLDDTIDDEKLR 311
Query: 281 RHFHSLGAGVIEEVRVQ--RDKGFGFVRYSTHAEAALAI 317
+ F G+ +V ++ R KGFGFV +S+ EA A+
Sbjct: 312 KEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAV 350
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 88/181 (48%), Gaps = 20/181 (11%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRK---DKSSYGFIHYFDRRSAAMAILSL 114
+VY+ N +V + L+E+FS G K++R +GF+ Y A A+ +
Sbjct: 192 NVYIKNFGEEVDDENLRELFSQFGKTLSVKVMRDCSGKSKGFGFVSYEKHEDANKAVEEM 251
Query: 115 NGRHLFGQPIKVNWAYASGQR-------------EDTSGH--FNIFVGDLSPEVTDATLF 159
NG+ + G+ I V A +R E S + N+++ +L + D L
Sbjct: 252 NGKEMSGKSIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLR 311
Query: 160 ACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT 219
FS + S + A+VM + GRS+GFGFV F + ++A A+ ++ G+ +GS+ + A
Sbjct: 312 KEFSPFGSITSAKVMLED--GRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQ 369
Query: 220 K 220
+
Sbjct: 370 R 370
Score = 38.9 bits (89), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRRSAAMAILSLN 115
++Y+ N+ + + L++ FS G + K++ +D S +GF+ + A A+ +N
Sbjct: 295 NLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMN 354
Query: 116 GRHLFGQPIKVNWAYASGQRE 136
GR + +P+ V A +R+
Sbjct: 355 GRIVGSKPLYVALAQRKEERK 375
>gi|302565150|ref|NP_001181379.1| polyadenylate-binding protein 1-like [Macaca mulatta]
Length = 614
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 83/279 (29%), Positives = 131/279 (46%), Gaps = 43/279 (15%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIR----KDKSSYGFIHYFDRRSAAMAILS 113
S+YVG++H VTE +L E FS GP+ ++ R + Y +I++ A A+ +
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADAERALDT 71
Query: 114 LNGRHLFGQPIKVNWAYAS-GQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDAR 172
+N L GQPI++ W+ G R+ SG NIF+ +L + + L+ FS + + +
Sbjct: 72 MNFEMLKGQPIRIMWSQRDPGLRK--SGVGNIFIKNLEDSIDNKALYDTFSTFGNILSCK 129
Query: 173 VMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSSD 232
V+ D+ SRGFGFV F + AQ AIN + G L R++ G+ + ++ +
Sbjct: 130 VVCDEHG--SRGFGFVHFETHEAAQQAINTMNGMLLNDRKV-------FVGHFKSRRERE 180
Query: 233 AKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIE 292
A EL + E +T +YV NL +V + L F G +
Sbjct: 181 A----ELGARALE----------------FTNIYVKNLPVDVDEQGLQDLFSQFGKML-- 218
Query: 293 EVRVQRD-----KGFGFVRYSTHAEAALAIQMGNTTQSS 326
V+V RD + FGFV + H EA A+ N + S
Sbjct: 219 SVKVMRDNSGHSRCFGFVNFEKHEEAQKAVVHMNGKEVS 257
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 77/285 (27%), Positives = 123/285 (43%), Gaps = 33/285 (11%)
Query: 49 PGFDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRRS 106
PG S ++++ N+ + L + FS+ G + CK++ + S +GF+H+ +
Sbjct: 91 PGLRKSGVGNIFIKNLEDSIDNKALYDTFSTFGNILSCKVVCDEHGSRGFGFVHFETHEA 150
Query: 107 AAMAILSLNGRHLFGQPIKVNWAYASGQREDTSG-----HFNIFVGDLSPEVTDATLFAC 161
A AI ++NG L + + V + +RE G NI+V +L +V + L
Sbjct: 151 AQQAINTMNGMLLNDRKVFVGHFKSRREREAELGARALEFTNIYVKNLPVDVDEQGLQDL 210
Query: 162 FSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKG 221
FS + +VM D +G SR FGFV+F ++AQ A+ + GK + R + A K
Sbjct: 211 FSQFGKMLSVKVMRD-NSGHSRCFGFVNFEKHEEAQKAVVHMNGKEVSGRLLYAGRAQKR 269
Query: 222 AGN-NEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLH 280
NE K+ + L Q +YV NL + L
Sbjct: 270 VERQNELKRRFEQMKQDRL------------------RRYQGVNLYVKNLDDSIDDDKLR 311
Query: 281 RHFHSLGAGVIEEVRVQRD----KGFGFVRYSTHAEAALAIQMGN 321
+ F GVI +V + KGFGFV +S+ EA A+ N
Sbjct: 312 KEFSPY--GVITSAKVMTEGGHSKGFGFVCFSSPEEATKAVTEMN 354
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 88/181 (48%), Gaps = 20/181 (11%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDK---SSYGFIHYFDRRSAAMAILSL 114
++YV N+ V E LQ++FS G + K++R + +GF+++ A A++ +
Sbjct: 192 NIYVKNLPVDVDEQGLQDLFSQFGKMLSVKVMRDNSGHSRCFGFVNFEKHEEAQKAVVHM 251
Query: 115 NGRHLFGQPIKVNWAYASGQREDTSGH---------------FNIFVGDLSPEVTDATLF 159
NG+ + G+ + A +R++ N++V +L + D L
Sbjct: 252 NGKEVSGRLLYAGRAQKRVERQNELKRRFEQMKQDRLRRYQGVNLYVKNLDDSIDDDKLR 311
Query: 160 ACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT 219
FS Y + A+VM + G S+GFGFV F + ++A A+ ++ G+ +G++ + A
Sbjct: 312 KEFSPYGVITSAKVMTE--GGHSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQ 369
Query: 220 K 220
+
Sbjct: 370 R 370
>gi|198386356|ref|NP_001094008.1| polyadenylate-binding protein 4 [Rattus norvegicus]
gi|183985833|gb|AAI66452.1| Pabpc4 protein [Rattus norvegicus]
Length = 644
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 131/281 (46%), Gaps = 47/281 (16%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIR----KDKSSYGFIHYFDRRSAAMAILS 113
S+YVG++H+ VTE +L E FS GPV ++ R + Y ++++ A A+ +
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 114 LNGRHLFGQPIKVNWAYASGQREDT---SGHFNIFVGDLSPEVTDATLFACFSVYPSCSD 170
+N + G+PI++ W+ QR+ + SG N+F+ +L + + L+ FS + +
Sbjct: 72 MNFDVIKGKPIRIMWS----QRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 171 ARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQS 230
+V+ D+ S+G+ FV F Q+ A AI + G L R++ G + ++
Sbjct: 128 CKVVCDENG--SKGYAFVHFETQEAANKAIEKMNGMLLNDRKVFV-------GRFKSRKE 178
Query: 231 SDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGV 290
+A EL + E +T VY+ N EV +L F G +
Sbjct: 179 REA----ELGAKAKE----------------FTNVYIKNFGEEVDDENLRELFSQFGKTL 218
Query: 291 IEEVRVQRD-----KGFGFVRYSTHAEAALAIQMGNTTQSS 326
V+V RD KGFGFV Y H +A A++ N + S
Sbjct: 219 --SVKVMRDCSGKSKGFGFVSYEKHEDANKAVEEMNGKEMS 257
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 129/283 (45%), Gaps = 31/283 (10%)
Query: 52 DPSTCRS----VYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRR 105
DPS +S V++ N+ + L + FS+ G + CK++ + S Y F+H+ +
Sbjct: 90 DPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQE 149
Query: 106 SAAMAILSLNGRHLFGQPIKVNWAYASGQREDTSG-----HFNIFVGDLSPEVTDATLFA 160
+A AI +NG L + + V + +RE G N+++ + EV D L
Sbjct: 150 AANKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDENLRE 209
Query: 161 CFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATK 220
FS + +VM D +G+S+GFGFVS+ +DA A+ ++ GK + + I A K
Sbjct: 210 LFSQFGKTLSVKVMRDC-SGKSKGFGFVSYEKHEDANKAVEEMNGKEMSGKSIFVGRAQK 268
Query: 221 GAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLH 280
++Q+ EL + +E + Q +Y+ NL + L
Sbjct: 269 KV----ERQA-------ELKRKFEQLKQERISRY------QGVNLYIKNLDDTIDDEKLR 311
Query: 281 RHFHSLGAGVIEEVRVQ--RDKGFGFVRYSTHAEAALAIQMGN 321
+ F G+ +V ++ R KGFGFV +S+ EA A+ N
Sbjct: 312 KEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMN 354
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 88/181 (48%), Gaps = 20/181 (11%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRK---DKSSYGFIHYFDRRSAAMAILSL 114
+VY+ N +V + L+E+FS G K++R +GF+ Y A A+ +
Sbjct: 192 NVYIKNFGEEVDDENLRELFSQFGKTLSVKVMRDCSGKSKGFGFVSYEKHEDANKAVEEM 251
Query: 115 NGRHLFGQPIKVNWAYASGQR-------------EDTSGH--FNIFVGDLSPEVTDATLF 159
NG+ + G+ I V A +R E S + N+++ +L + D L
Sbjct: 252 NGKEMSGKSIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLR 311
Query: 160 ACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT 219
FS + S + A+VM + GRS+GFGFV F + ++A A+ ++ G+ +GS+ + A
Sbjct: 312 KEFSPFGSITSAKVMLED--GRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQ 369
Query: 220 K 220
+
Sbjct: 370 R 370
Score = 38.9 bits (89), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRRSAAMAILSLN 115
++Y+ N+ + + L++ FS G + K++ +D S +GF+ + A A+ +N
Sbjct: 295 NLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMN 354
Query: 116 GRHLFGQPIKVNWAYASGQRE 136
GR + +P+ V A +R+
Sbjct: 355 GRIVGSKPLYVALAQRKEERK 375
>gi|148666752|gb|EDK99168.1| cytotoxic granule-associated RNA binding protein 1, isoform CRA_b
[Mus musculus]
Length = 293
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/171 (39%), Positives = 95/171 (55%), Gaps = 18/171 (10%)
Query: 170 DARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQ 229
DARV+ D TG+S+G+GFVSF N+ DA++AI + G+WLG RQIR NWAT+ +
Sbjct: 41 DARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAPKSTY 100
Query: 230 SSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAG 289
S+ K + S D E + +P N TVY G + +T+ + + F G
Sbjct: 101 ESNTKQL-------SYD--EVVSQSSPNN----CTVYCGGVTSGLTEQLMRQTFSPFGQ- 146
Query: 290 VIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSK 340
I E+RV DKG+ FVR+S+H AA AI N T + G +KC WG +
Sbjct: 147 -IMEIRVFPDKGYSFVRFSSHESAAHAIVSVNGTT---IEGHVVKCYWGKE 193
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/144 (22%), Positives = 63/144 (43%), Gaps = 25/144 (17%)
Query: 96 YGFIHYFDRRSAAMAILSLNGRHLFGQPIKVNWA----------YASGQR---------E 136
YGF+ +F++ A AI + G+ L G+ I+ NWA Y S + +
Sbjct: 56 YGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAPKSTYESNTKQLSYDEVVSQ 115
Query: 137 DTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDA 196
+ + ++ G ++ +T+ + FS + + RV D +G+ FV F + + A
Sbjct: 116 SSPNNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPD------KGYSFVRFSSHESA 169
Query: 197 QSAINDLTGKWLGSRQIRCNWATK 220
AI + G + ++C W +
Sbjct: 170 AHAIVSVNGTTIEGHVVKCYWGKE 193
Score = 46.6 bits (109), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 43/78 (55%), Gaps = 3/78 (3%)
Query: 52 DPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSSYGFIHYFDRRSAAMAI 111
P+ C +VY G + + +TE L+++ FS G + ++ DK Y F+ + SAA AI
Sbjct: 117 SPNNC-TVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVF-PDK-GYSFVRFSSHESAAHAI 173
Query: 112 LSLNGRHLFGQPIKVNWA 129
+S+NG + G +K W
Sbjct: 174 VSVNGTTIEGHVVKCYWG 191
>gi|149023878|gb|EDL80375.1| rCG31475, isoform CRA_a [Rattus norvegicus]
Length = 660
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 131/281 (46%), Gaps = 47/281 (16%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIR----KDKSSYGFIHYFDRRSAAMAILS 113
S+YVG++H+ VTE +L E FS GPV ++ R + Y ++++ A A+ +
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 114 LNGRHLFGQPIKVNWAYASGQREDT---SGHFNIFVGDLSPEVTDATLFACFSVYPSCSD 170
+N + G+PI++ W+ QR+ + SG N+F+ +L + + L+ FS + +
Sbjct: 72 MNFDVIKGKPIRIMWS----QRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 171 ARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQS 230
+V+ D+ S+G+ FV F Q+ A AI + G L R++ G + ++
Sbjct: 128 CKVVCDENG--SKGYAFVHFETQEAANKAIEKMNGMLLNDRKVFV-------GRFKSRKE 178
Query: 231 SDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGV 290
+A EL + E +T VY+ N EV +L F G +
Sbjct: 179 REA----ELGAKAKE----------------FTNVYIKNFGEEVDDENLRELFSQFGKTL 218
Query: 291 IEEVRVQRD-----KGFGFVRYSTHAEAALAIQMGNTTQSS 326
V+V RD KGFGFV Y H +A A++ N + S
Sbjct: 219 --SVKVMRDCSGKSKGFGFVSYEKHEDANKAVEEMNGKEMS 257
Score = 101 bits (251), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 128/279 (45%), Gaps = 31/279 (11%)
Query: 52 DPSTCRS----VYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRR 105
DPS +S V++ N+ + L + FS+ G + CK++ + S Y F+H+ +
Sbjct: 90 DPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQE 149
Query: 106 SAAMAILSLNGRHLFGQPIKVNWAYASGQREDTSG-----HFNIFVGDLSPEVTDATLFA 160
+A AI +NG L + + V + +RE G N+++ + EV D L
Sbjct: 150 AANKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDENLRE 209
Query: 161 CFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATK 220
FS + +VM D +G+S+GFGFVS+ +DA A+ ++ GK + + I A K
Sbjct: 210 LFSQFGKTLSVKVMRDC-SGKSKGFGFVSYEKHEDANKAVEEMNGKEMSGKSIFVGRAQK 268
Query: 221 GAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLH 280
++Q+ EL + +E + Q +Y+ NL + L
Sbjct: 269 KV----ERQA-------ELKRKFEQLKQERISRY------QGVNLYIKNLDDTIDDEKLR 311
Query: 281 RHFHSLGAGVIEEVRVQ--RDKGFGFVRYSTHAEAALAI 317
+ F G+ +V ++ R KGFGFV +S+ EA A+
Sbjct: 312 KEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAV 350
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 88/181 (48%), Gaps = 20/181 (11%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRK---DKSSYGFIHYFDRRSAAMAILSL 114
+VY+ N +V + L+E+FS G K++R +GF+ Y A A+ +
Sbjct: 192 NVYIKNFGEEVDDENLRELFSQFGKTLSVKVMRDCSGKSKGFGFVSYEKHEDANKAVEEM 251
Query: 115 NGRHLFGQPIKVNWAYASGQR-------------EDTSGH--FNIFVGDLSPEVTDATLF 159
NG+ + G+ I V A +R E S + N+++ +L + D L
Sbjct: 252 NGKEMSGKSIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLR 311
Query: 160 ACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT 219
FS + S + A+VM + GRS+GFGFV F + ++A A+ ++ G+ +GS+ + A
Sbjct: 312 KEFSPFGSITSAKVMLED--GRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQ 369
Query: 220 K 220
+
Sbjct: 370 R 370
Score = 38.9 bits (89), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRRSAAMAILSLN 115
++Y+ N+ + + L++ FS G + K++ +D S +GF+ + A A+ +N
Sbjct: 295 NLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMN 354
Query: 116 GRHLFGQPIKVNWAYASGQRE 136
GR + +P+ V A +R+
Sbjct: 355 GRIVGSKPLYVALAQRKEERK 375
>gi|355563109|gb|EHH19671.1| Polyadenylate-binding protein 1-like protein [Macaca mulatta]
Length = 614
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 83/279 (29%), Positives = 131/279 (46%), Gaps = 43/279 (15%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIR----KDKSSYGFIHYFDRRSAAMAILS 113
S+YVG++H VTE +L E FS GP+ ++ R + Y +I++ A A+ +
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADAERALDT 71
Query: 114 LNGRHLFGQPIKVNWAYAS-GQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDAR 172
+N L GQPI++ W+ G R+ SG NIF+ +L + + L+ FS + + +
Sbjct: 72 MNFEMLKGQPIRIMWSQRDPGLRK--SGVGNIFIKNLEDSIDNKALYDTFSTFGNILSCK 129
Query: 173 VMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSSD 232
V+ D+ SRGFGFV F + AQ AIN + G L R++ G+ + ++ +
Sbjct: 130 VVCDEHG--SRGFGFVHFETHEAAQQAINTMNGMLLNDRKV-------FVGHFKSRRERE 180
Query: 233 AKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIE 292
A EL + E +T +YV NL +V + L F G +
Sbjct: 181 A----ELGARALE----------------FTNIYVKNLPVDVDEQGLQDLFSQFGKML-- 218
Query: 293 EVRVQRD-----KGFGFVRYSTHAEAALAIQMGNTTQSS 326
V+V RD + FGFV + H EA A+ N + S
Sbjct: 219 SVKVMRDNSGHSRCFGFVNFEKHEEAQKAVVHMNGKEVS 257
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 77/285 (27%), Positives = 123/285 (43%), Gaps = 33/285 (11%)
Query: 49 PGFDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRRS 106
PG S ++++ N+ + L + FS+ G + CK++ + S +GF+H+ +
Sbjct: 91 PGLRKSGVGNIFIKNLEDSIDNKALYDTFSTFGNILSCKVVCDEHGSRGFGFVHFETHEA 150
Query: 107 AAMAILSLNGRHLFGQPIKVNWAYASGQREDTSG-----HFNIFVGDLSPEVTDATLFAC 161
A AI ++NG L + + V + +RE G NI+V +L +V + L
Sbjct: 151 AQQAINTMNGMLLNDRKVFVGHFKSRREREAELGARALEFTNIYVKNLPVDVDEQGLQDL 210
Query: 162 FSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKG 221
FS + +VM D +G SR FGFV+F ++AQ A+ + GK + R + A K
Sbjct: 211 FSQFGKMLSVKVMRDN-SGHSRCFGFVNFEKHEEAQKAVVHMNGKEVSGRLLYAGRAQKR 269
Query: 222 AGN-NEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLH 280
NE K+ + L Q +YV NL + L
Sbjct: 270 VERQNELKRRFEQMKQDRL------------------RRYQGVNLYVKNLDDSIDDDKLR 311
Query: 281 RHFHSLGAGVIEEVRVQRD----KGFGFVRYSTHAEAALAIQMGN 321
+ F GVI +V + KGFGFV +S+ EA A+ N
Sbjct: 312 KEFSPY--GVITSAKVMTEGGHSKGFGFVCFSSPEEATKAVTEMN 354
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 88/181 (48%), Gaps = 20/181 (11%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDK---SSYGFIHYFDRRSAAMAILSL 114
++YV N+ V E LQ++FS G + K++R + +GF+++ A A++ +
Sbjct: 192 NIYVKNLPVDVDEQGLQDLFSQFGKMLSVKVMRDNSGHSRCFGFVNFEKHEEAQKAVVHM 251
Query: 115 NGRHLFGQPIKVNWAYASGQREDTSGH---------------FNIFVGDLSPEVTDATLF 159
NG+ + G+ + A +R++ N++V +L + D L
Sbjct: 252 NGKEVSGRLLYAGRAQKRVERQNELKRRFEQMKQDRLRRYQGVNLYVKNLDDSIDDDKLR 311
Query: 160 ACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT 219
FS Y + A+VM + G S+GFGFV F + ++A A+ ++ G+ +G++ + A
Sbjct: 312 KEFSPYGVITSAKVMTE--GGHSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQ 369
Query: 220 K 220
+
Sbjct: 370 R 370
>gi|148685701|gb|EDL17648.1| Tial1 cytotoxic granule-associated RNA binding protein-like 1,
isoform CRA_b [Mus musculus]
gi|149067623|gb|EDM17175.1| Tial1 cytotoxic granule-associated RNA binding protein-like 1
(mapped), isoform CRA_c [Rattus norvegicus]
Length = 252
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/171 (39%), Positives = 96/171 (56%), Gaps = 18/171 (10%)
Query: 170 DARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQ 229
DARV+ D TG+S+G+GFVSF N+ DA++AI + G+WLG RQIR NWAT+ + Q
Sbjct: 2 DARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQ 61
Query: 230 SSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAG 289
++ K + ++ N +P+N TVY G +A +T + + F G
Sbjct: 62 ETNTKQL---------RFEDVVNQSSPKN----CTVYCGGIASGLTDQLMRQTFSPFGQ- 107
Query: 290 VIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSK 340
I E+RV +KG+ FVR+STH AA AI N T + G +KC WG +
Sbjct: 108 -IMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTT---IEGHVVKCYWGKE 154
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/156 (22%), Positives = 65/156 (41%), Gaps = 25/156 (16%)
Query: 96 YGFIHYFDRRSAAMAILSLNGRHLFGQPIKVNWAY------ASGQREDTS---------- 139
YGF+ ++++ A AI+ + G+ L G+ I+ NWA S Q +T
Sbjct: 17 YGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQETNTKQLRFEDVVNQ 76
Query: 140 ---GHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDA 196
+ ++ G ++ +TD + FS + + RV +G+ FV F + A
Sbjct: 77 SSPKNCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVF------PEKGYSFVRFSTHESA 130
Query: 197 QSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSSD 232
AI + G + ++C W + ++ Q D
Sbjct: 131 AHAIVSVNGTTIEGHVVKCYWGKESPDMTKNFQQVD 166
Score = 45.8 bits (107), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 42/80 (52%), Gaps = 3/80 (3%)
Query: 53 PSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSSYGFIHYFDRRSAAMAIL 112
P C +VY G I + +T+ L+++ FS G + ++ + Y F+ + SAA AI+
Sbjct: 79 PKNC-TVYCGGIASGLTDQLMRQTFSPFGQIMEIRVF--PEKGYSFVRFSTHESAAHAIV 135
Query: 113 SLNGRHLFGQPIKVNWAYAS 132
S+NG + G +K W S
Sbjct: 136 SVNGTTIEGHVVKCYWGKES 155
>gi|50306049|ref|XP_452986.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|74690315|sp|Q6CSV3.1|PABP_KLULA RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=Polyadenylate tail-binding protein
gi|49642119|emb|CAH01837.1| KLLA0C17600p [Kluyveromyces lactis]
Length = 592
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 78/272 (28%), Positives = 122/272 (44%), Gaps = 38/272 (13%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIR----KDKSSYGFIHYFDRRSAAMAILS 113
S+YVG + +TE LL +VFS GP+ ++ R K Y +++Y D + AI
Sbjct: 51 SLYVGELDPNITEALLYDVFSPLGPISSIRVCRDAVTKASLGYAYVNYTDYEAGKKAIQE 110
Query: 114 LNGRHLFGQPIKVNWAYAS-GQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDAR 172
LN + G+P ++ W+ R+ SG NIF+ +L P + + L FS + +
Sbjct: 111 LNYAEINGRPCRIMWSERDPAIRKKGSG--NIFIKNLHPAIDNKALHETFSTFGEVLSCK 168
Query: 173 VMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSSD 232
V D+ G SRGFGFV F+ + DA+ AI + G + ++ D
Sbjct: 169 VALDE-NGNSRGFGFVHFKEESDAKDAIEAVNGMLMNGLEVYVAMHVP---------KKD 218
Query: 233 AKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLG---AG 289
S +E EA N +T +YV N+ E T + + F G +
Sbjct: 219 RISKLE---------------EAKAN---FTNIYVKNIDVETTDEEFEQLFSQYGEIVSA 260
Query: 290 VIEEVRVQRDKGFGFVRYSTHAEAALAIQMGN 321
+E+ + KGFGFV + H AA A++ N
Sbjct: 261 ALEKDAEGKPKGFGFVNFVDHNAAAKAVEELN 292
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/278 (26%), Positives = 119/278 (42%), Gaps = 35/278 (12%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS---YGFIHYFDRRSAAMAILSL 114
++++ N+H + L E FS+ G V CK+ + + +GF+H+ + A AI ++
Sbjct: 139 NIFIKNLHPAIDNKALHETFSTFGEVLSCKVALDENGNSRGFGFVHFKEESDAKDAIEAV 198
Query: 115 NGRHLFGQPIKVNWAYASGQR----EDTSGHF-NIFVGDLSPEVTDATLFACFSVYPSCS 169
NG + G + V R E+ +F NI+V ++ E TD FS Y
Sbjct: 199 NGMLMNGLEVYVAMHVPKKDRISKLEEAKANFTNIYVKNIDVETTDEEFEQLFSQYGEIV 258
Query: 170 DARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNED-K 228
A + D + G+ +GFGFV+F + A A+ +L GK S+ + A K E+ K
Sbjct: 259 SAALEKDAE-GKPKGFGFVNFVDHNAAAKAVEELNGKEFKSQALYVGRAQKKYERAEELK 317
Query: 229 QSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGA 288
+ + + +L Q +++ NL + L F G
Sbjct: 318 KQYEQYRLEKLAKF------------------QGVNLFIKNLDDSIDDEKLKEEFAPYG- 358
Query: 289 GVIEEVRVQRD-----KGFGFVRYSTHAEAALAIQMGN 321
I RV RD KGFGFV +S+ EA A+ N
Sbjct: 359 -TITSARVMRDQEGNSKGFGFVCFSSPEEATKAMTEKN 395
>gi|312080690|ref|XP_003142708.1| hypothetical protein LOAG_07126 [Loa loa]
Length = 366
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 112/208 (53%), Gaps = 21/208 (10%)
Query: 135 REDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQ 194
+ +T+ +F++FVGDL+ EV TL A F + S+A+V+ D +T +S+ +GFVSF ++
Sbjct: 124 KVNTNKNFHVFVGDLATEVDSCTLKAAFESFGEISEAKVIRDPQTLKSKSYGFVSFAVKE 183
Query: 195 DAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTE 254
+A+ AI + G+ +G R IR NWA + E+ ++ T + + TN
Sbjct: 184 NAEKAIEKMNGQMIGRRPIRTNWAVRRFDGGEE------YAMKPPTYDNIFNATHATN-- 235
Query: 255 APENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAA 314
T+VYVG ++P T +L + F ++ + EVR+ + +G+ FVRY T A
Sbjct: 236 --------TSVYVGGISPATTDEELMQPFSAIAT--VTEVRLFKQQGYAFVRYLTKDAAT 285
Query: 315 LAIQMGNTTQSSYLFGKQMKCSWGSKPT 342
AI + + + G+++KCSW T
Sbjct: 286 RAIMFMHGKE---INGQKIKCSWSRTVT 310
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 97/204 (47%), Gaps = 26/204 (12%)
Query: 59 VYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKS----SYGFIHYFDRRSAAMAILSL 114
V+VG++ T+V L+ F S G + K+IR ++ SYGF+ + + +A AI +
Sbjct: 133 VFVGDLATEVDSCTLKAAFESFGEISEAKVIRDPQTLKSKSYGFVSFAVKENAEKAIEKM 192
Query: 115 NGRHLFGQPIKVNWA----------------YASGQREDTSGHFNIFVGDLSPEVTDATL 158
NG+ + +PI+ NWA Y + + + +++VG +SP TD L
Sbjct: 193 NGQMIGRRPIRTNWAVRRFDGGEEYAMKPPTYDNIFNATHATNTSVYVGGISPATTDEEL 252
Query: 159 FACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWA 218
FS + ++ R+ Q G+ FV + + A AI + GK + ++I+C+W+
Sbjct: 253 MQPFSAIATVTEVRLFKQQ------GYAFVRYLTKDAATRAIMFMHGKEINGQKIKCSWS 306
Query: 219 TKGAGNNEDKQSSDAKSVVELTNG 242
N + + A +V LTN
Sbjct: 307 RTVTENKINISNQTASNVNLLTNS 330
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 50/103 (48%), Gaps = 13/103 (12%)
Query: 48 PPGFDP------STCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSSYGFIHY 101
PP +D +T SVYVG I T+ L + FS+ V +L ++ Y F+ Y
Sbjct: 221 PPTYDNIFNATHATNTSVYVGGISPATTDEELMQPFSAIATVTEVRLFKQQ--GYAFVRY 278
Query: 102 FDRRSAAMAILSLNGRHLFGQPIKVNWAYASGQREDTSGHFNI 144
+ +A AI+ ++G+ + GQ IK +W+ R T NI
Sbjct: 279 LTKDAATRAIMFMHGKEINGQKIKCSWS-----RTVTENKINI 316
>gi|313237737|emb|CBY12875.1| unnamed protein product [Oikopleura dioica]
Length = 307
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 61/189 (32%), Positives = 102/189 (53%), Gaps = 8/189 (4%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKL----IRKDKSSYGFIHYFDRRSAAMAILS 113
+VYVG + +VTE LL E+F GPV C + + + YGF+ + A AI
Sbjct: 12 TVYVGGLDEKVTEHLLAELFIQVGPVVNCHMPKDRVTQTHQGYGFVEFLSEDDADYAIKI 71
Query: 114 LNGRHLFGQPIKVNWAYASGQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSC-SDAR 172
LN LFG+P++VN A + + D N+F+G+L PE+ + L+ FS + +
Sbjct: 72 LNMIKLFGKPVRVNKASSHQKNLDVGA--NLFIGNLDPEIDEKLLYDTFSAFGVILQTPK 129
Query: 173 VMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSSD 232
+M D TG S+GF F+++ + + A +A+ + G++L +R I ++A K G E + S
Sbjct: 130 IMRDPDTGNSKGFAFINYSSFEAADAALEAMNGQYLCNRPITISFAFKKDGKGE-RHGSA 188
Query: 233 AKSVVELTN 241
A+ ++ N
Sbjct: 189 AERLLAAQN 197
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 84/203 (41%), Gaps = 44/203 (21%)
Query: 144 IFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDL 203
++VG L +VT+ L F + + D+ T +G+GFV F ++ DA AI L
Sbjct: 13 VYVGGLDEKVTEHLLAELFIQVGPVVNCHMPKDRVTQTHQGYGFVEFLSEDDADYAIKIL 72
Query: 204 TGKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYT 263
L + +R N K SS K++ N
Sbjct: 73 NMIKLFGKPVRVN-----------KASSHQKNLDVGAN---------------------- 99
Query: 264 TVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRD------KGFGFVRYSTHAEAALAI 317
+++GNL PE+ + L+ F + G +++ ++ RD KGF F+ YS+ A A+
Sbjct: 100 -LFIGNLDPEIDEKLLYDTFSAFGV-ILQTPKIMRDPDTGNSKGFAFINYSSFEAADAAL 157
Query: 318 QMGNTTQSSYLFGKQMKCSWGSK 340
+ N YL + + S+ K
Sbjct: 158 EAMN---GQYLCNRPITISFAFK 177
>gi|67904206|ref|XP_682359.1| hypothetical protein AN9090.2 [Aspergillus nidulans FGSC A4]
gi|40742733|gb|EAA61923.1| hypothetical protein AN9090.2 [Aspergillus nidulans FGSC A4]
gi|67043519|gb|AAY63883.1| putative RNA binding protein [Emericella nidulans]
gi|259485498|tpe|CBF82571.1| TPA: Putative RNA binding proteinPutative uncharacterized protein ;
[Source:UniProtKB/TrEMBL;Acc:Q5ARJ0] [Aspergillus
nidulans FGSC A4]
Length = 393
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 93/299 (31%), Positives = 148/299 (49%), Gaps = 26/299 (8%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIR-----KDKSSYGFIHYFDRRSAAMAIL 112
++++G + + E ++ ++ G K+IR + + Y F+ F +AA L
Sbjct: 66 TLWMGELEPWIDENFVRNLWFQMGEQVNVKMIRDKFSGRSNAGYCFVD-FASPAAAAKAL 124
Query: 113 SLNGRHL--FGQPIKVNWAYASG----QREDTSGHFNIFVGDLSPEVTDATLFACF-SVY 165
SLNG + + K+NWA G R+D ++IFVGDL PEV + L + F S +
Sbjct: 125 SLNGTPMPNTNRLFKLNWATGGGLADRSRDDRGPEYSIFVGDLGPEVNEYVLVSLFQSRF 184
Query: 166 PSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT---KGA 222
PSC A++M D +G SRG+GFV F ++ D Q A++++ G + G+R +R + AT KG
Sbjct: 185 PSCKSAKIMTDPISGMSRGYGFVRFSDENDQQRALSEMQGVYCGNRPMRISTATPKNKGP 244
Query: 223 GNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPEN---NPQYTTVYVGNLAPEVTQLDL 279
G + + G+ G P N +P TTV+VG L+ VT+ +L
Sbjct: 245 GVVPGGMGMPGPAGMYPPMGAPPMG--FYGAPQPMNQFTDPNNTTVFVGGLSGYVTEDEL 302
Query: 280 HRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWG 338
F G G I V++ KG GFV++ A +AI N Q + +++ SWG
Sbjct: 303 RSFFQ--GFGEITYVKIPPGKGCGFVQFVQRHAAEMAI---NQMQGYPIGNSRVRLSWG 356
>gi|134079837|emb|CAK40970.1| unnamed protein product [Aspergillus niger]
Length = 402
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 91/302 (30%), Positives = 147/302 (48%), Gaps = 32/302 (10%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRK----DKSSYGFIHYFDRRSAAMAILS 113
++++G + + E ++ ++ G K+IR + Y F+ F +AA LS
Sbjct: 67 TLWMGELEPWIDENFVRNLWFQMGEQVNVKMIRDKFSGSNAGYCFVD-FASPAAAAKALS 125
Query: 114 LNGRHL--FGQPIKVNWAYASG----QREDTSGHFNIFVGDLSPEVTDATLFACF-SVYP 166
LNG + + K+NWA G R+D ++IFVGDL PEV + L + F S +P
Sbjct: 126 LNGTPMPNTNRLFKLNWATGGGLADRSRDDRGPEYSIFVGDLGPEVNEYVLVSLFQSRFP 185
Query: 167 SCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNE 226
SC A++M D +G SRG+GFV F ++ D Q A++++ G + G+R +R + AT +
Sbjct: 186 SCKSAKIMTDPISGMSRGYGFVRFSDENDQQRALSEMQGVYCGNRPMRISTATP-----K 240
Query: 227 DKQSSDAKSVVELTNGSS-----EDGKETTNTEAPE-----NNPQYTTVYVGNLAPEVTQ 276
+K S + G + AP+ +P TTV+VG L+ VT+
Sbjct: 241 NKGPSLGAAGAMGMPGPAGMYPPMGAPPMGFYGAPQPMNQFTDPNNTTVFVGGLSGYVTE 300
Query: 277 LDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCS 336
+L F G G I V++ KG GFV++ A +AI N Q + +++ S
Sbjct: 301 DELRSFFQ--GFGEITYVKIPPGKGCGFVQFVQRHAAEMAI---NQMQGYPIGNSRVRLS 355
Query: 337 WG 338
WG
Sbjct: 356 WG 357
Score = 38.5 bits (88), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 45/203 (22%), Positives = 86/203 (42%), Gaps = 37/203 (18%)
Query: 140 GHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSA 199
G +++G+L P + + + + + +++ D+ +G + G+ FV F + A A
Sbjct: 64 GKTTLWMGELEPWIDENFVRNLWFQMGEQVNVKMIRDKFSGSNAGYCFVDFASPAAAAKA 123
Query: 200 IN-DLTGKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPEN 258
++ + T +R + NWAT G L + S +D
Sbjct: 124 LSLNGTPMPNTNRLFKLNWATGGG----------------LADRSRDD-----------R 156
Query: 259 NPQYTTVYVGNLAPEVTQLDLHRHFHSL-----GAGVIEEVRVQRDKGFGFVRYSTHAEA 313
P+Y+ ++VG+L PEV + L F S A ++ + +G+GFVR+S +
Sbjct: 157 GPEYS-IFVGDLGPEVNEYVLVSLFQSRFPSCKSAKIMTDPISGMSRGYGFVRFSDENDQ 215
Query: 314 ALAIQMGNTTQSSYLFGKQMKCS 336
A+ + Q Y + M+ S
Sbjct: 216 QRAL---SEMQGVYCGNRPMRIS 235
>gi|350585908|ref|XP_003482078.1| PREDICTED: polyadenylate-binding protein 4 isoform 2 [Sus scrofa]
Length = 660
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 131/281 (46%), Gaps = 47/281 (16%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIR----KDKSSYGFIHYFDRRSAAMAILS 113
S+YVG++H+ VTE +L E FS GPV ++ R + Y ++++ A A+ +
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 114 LNGRHLFGQPIKVNWAYASGQREDT---SGHFNIFVGDLSPEVTDATLFACFSVYPSCSD 170
+N + G+PI++ W+ QR+ + SG N+F+ +L + + L+ FS + +
Sbjct: 72 MNFDVIKGKPIRIMWS----QRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 171 ARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQS 230
+V+ D+ S+G+ FV F Q+ A AI + G L R++ G + ++
Sbjct: 128 CKVVCDENG--SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFV-------GRFKSRKE 178
Query: 231 SDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGV 290
+A EL + E +T VY+ N EV +L F G +
Sbjct: 179 REA----ELGAKAKE----------------FTNVYIKNFGEEVDDENLKELFSQFGKTL 218
Query: 291 IEEVRVQRD-----KGFGFVRYSTHAEAALAIQMGNTTQSS 326
V+V RD KGFGFV Y H +A A++ N + S
Sbjct: 219 --SVKVMRDPSGKSKGFGFVSYEKHEDANKAVEEMNGKEIS 257
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 129/283 (45%), Gaps = 31/283 (10%)
Query: 52 DPSTCRS----VYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRR 105
DPS +S V++ N+ + L + FS+ G + CK++ + S Y F+H+ +
Sbjct: 90 DPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQE 149
Query: 106 SAAMAILSLNGRHLFGQPIKVNWAYASGQREDTSG-----HFNIFVGDLSPEVTDATLFA 160
+A AI +NG L + + V + +RE G N+++ + EV D L
Sbjct: 150 AADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDENLKE 209
Query: 161 CFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATK 220
FS + +VM D +G+S+GFGFVS+ +DA A+ ++ GK + + I A K
Sbjct: 210 LFSQFGKTLSVKVMRD-PSGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKVIFVGRAQK 268
Query: 221 GAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLH 280
++Q+ EL + +E + Q +Y+ NL + L
Sbjct: 269 KV----ERQA-------ELKRKFEQLKQERISRY------QGVNLYIKNLDDTIDDEKLR 311
Query: 281 RHFHSLGAGVIEEVRVQ--RDKGFGFVRYSTHAEAALAIQMGN 321
+ F G+ +V ++ R KGFGFV +S+ EA A+ N
Sbjct: 312 KEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMN 354
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 88/181 (48%), Gaps = 20/181 (11%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRK---DKSSYGFIHYFDRRSAAMAILSL 114
+VY+ N +V + L+E+FS G K++R +GF+ Y A A+ +
Sbjct: 192 NVYIKNFGEEVDDENLKELFSQFGKTLSVKVMRDPSGKSKGFGFVSYEKHEDANKAVEEM 251
Query: 115 NGRHLFGQPIKVNWAYASGQR-------------EDTSGH--FNIFVGDLSPEVTDATLF 159
NG+ + G+ I V A +R E S + N+++ +L + D L
Sbjct: 252 NGKEISGKVIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLR 311
Query: 160 ACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT 219
FS + S + A+VM + GRS+GFGFV F + ++A A+ ++ G+ +GS+ + A
Sbjct: 312 KEFSPFGSITSAKVMLED--GRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQ 369
Query: 220 K 220
+
Sbjct: 370 R 370
Score = 38.9 bits (89), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRRSAAMAILSLN 115
++Y+ N+ + + L++ FS G + K++ +D S +GF+ + A A+ +N
Sbjct: 295 NLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMN 354
Query: 116 GRHLFGQPIKVNWAYASGQRE 136
GR + +P+ V A +R+
Sbjct: 355 GRIVGSKPLYVALAQRKEERK 375
>gi|313240198|emb|CBY32547.1| unnamed protein product [Oikopleura dioica]
Length = 307
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 61/189 (32%), Positives = 102/189 (53%), Gaps = 8/189 (4%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKL----IRKDKSSYGFIHYFDRRSAAMAILS 113
+VYVG + +VTE LL E+F GPV C + + + YGF+ + A AI
Sbjct: 12 TVYVGGLDEKVTEHLLAELFIQVGPVVNCHMPKDRVTQTHQGYGFVEFLSEDDADYAIKI 71
Query: 114 LNGRHLFGQPIKVNWAYASGQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSC-SDAR 172
LN LFG+P++VN A + + D N+F+G+L PE+ + L+ FS + +
Sbjct: 72 LNMIKLFGKPVRVNKASSHQKNLDVGA--NLFIGNLDPEIDEKLLYDTFSAFGVILQTPK 129
Query: 173 VMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSSD 232
+M D TG S+GF F+++ + + A +A+ + G++L +R I ++A K G E + S
Sbjct: 130 IMRDPDTGNSKGFAFINYSSFEAADAALEAMNGQYLCNRPITISFAFKKDGKGE-RHGSA 188
Query: 233 AKSVVELTN 241
A+ ++ N
Sbjct: 189 AERLLAAQN 197
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 84/203 (41%), Gaps = 44/203 (21%)
Query: 144 IFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDL 203
++VG L +VT+ L F + + D+ T +G+GFV F ++ DA AI L
Sbjct: 13 VYVGGLDEKVTEHLLAELFIQVGPVVNCHMPKDRVTQTHQGYGFVEFLSEDDADYAIKIL 72
Query: 204 TGKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYT 263
L + +R N K SS K++ N
Sbjct: 73 NMIKLFGKPVRVN-----------KASSHQKNLDVGAN---------------------- 99
Query: 264 TVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRD------KGFGFVRYSTHAEAALAI 317
+++GNL PE+ + L+ F + G +++ ++ RD KGF F+ YS+ A A+
Sbjct: 100 -LFIGNLDPEIDEKLLYDTFSAFGV-ILQTPKIMRDPDTGNSKGFAFINYSSFEAADAAL 157
Query: 318 QMGNTTQSSYLFGKQMKCSWGSK 340
+ N YL + + S+ K
Sbjct: 158 EAMN---GQYLCNRPITISFAFK 177
>gi|194672643|ref|XP_882298.3| PREDICTED: poly(A) binding protein, cytoplasmic 1-like isoform 19
[Bos taurus]
gi|297482024|ref|XP_002692514.1| PREDICTED: poly(A) binding protein, cytoplasmic 1-like [Bos taurus]
gi|296480945|tpg|DAA23060.1| TPA: polyadenylate-binding protein 1-like [Bos taurus]
Length = 613
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 80/270 (29%), Positives = 130/270 (48%), Gaps = 43/270 (15%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIR----KDKSSYGFIHYFDRRSAAMAILS 113
S+YVG++H VTE +L E FS GP+ ++ R + Y +I++ A A+ +
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADAERALDT 71
Query: 114 LNGRHLFGQPIKVNWAYAS-GQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDAR 172
+N + GQPI++ W+ G R+ SG NIF+ +L + + L+ FS + + +
Sbjct: 72 MNFEVIKGQPIRIMWSQRDPGLRK--SGVGNIFIKNLEDSIDNKALYDTFSTFGNILSCK 129
Query: 173 VMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSSD 232
V+ D+ SRGFGFV F + AQ+AI+ + G L R++ G+ + ++ +
Sbjct: 130 VVCDEHG--SRGFGFVHFETHEAAQNAISTMNGMLLNDRKV-------FVGHFKSRRERE 180
Query: 233 AKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIE 292
VEL + E +T +YV NL +V + L F G +
Sbjct: 181 ----VELGARAME----------------FTNIYVKNLHVDVDEQRLQDLFSQFGKML-- 218
Query: 293 EVRVQRD-----KGFGFVRYSTHAEAALAI 317
V+V RD +GFGFV + H EA A+
Sbjct: 219 SVKVMRDDSGHSRGFGFVNFEKHEEAQKAV 248
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 78/285 (27%), Positives = 126/285 (44%), Gaps = 33/285 (11%)
Query: 49 PGFDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRRS 106
PG S ++++ N+ + L + FS+ G + CK++ + S +GF+H+ +
Sbjct: 91 PGLRKSGVGNIFIKNLEDSIDNKALYDTFSTFGNILSCKVVCDEHGSRGFGFVHFETHEA 150
Query: 107 AAMAILSLNGRHLFGQPIKVNWAYASGQREDTSG-----HFNIFVGDLSPEVTDATLFAC 161
A AI ++NG L + + V + +RE G NI+V +L +V + L
Sbjct: 151 AQNAISTMNGMLLNDRKVFVGHFKSRREREVELGARAMEFTNIYVKNLHVDVDEQRLQDL 210
Query: 162 FSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKG 221
FS + +VM D +G SRGFGFV+F ++AQ A+ ++ G+ + R + A K
Sbjct: 211 FSQFGKMLSVKVMRDD-SGHSRGFGFVNFEKHEEAQKAVVNMNGREVSGRLLYVGRAQKR 269
Query: 222 AGN-NEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLH 280
NE K+ + LT Q +YV NL + L
Sbjct: 270 VERQNELKRRFEQMKQDRLTRY------------------QGVNLYVKNLDDSIDDEKLR 311
Query: 281 RHFHSLGAGVIEEVRVQRD----KGFGFVRYSTHAEAALAIQMGN 321
+ F GVI +V + KGFGFV +S+ EA A+ N
Sbjct: 312 KEFSPY--GVITSAKVMTEGGHSKGFGFVCFSSPEEATKAVTEMN 354
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 91/181 (50%), Gaps = 20/181 (11%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDK---SSYGFIHYFDRRSAAMAILSL 114
++YV N+H V E LQ++FS G + K++R D +GF+++ A A++++
Sbjct: 192 NIYVKNLHVDVDEQRLQDLFSQFGKMLSVKVMRDDSGHSRGFGFVNFEKHEEAQKAVVNM 251
Query: 115 NGRHLFGQPIKVNWAYASGQREDTSGH---------------FNIFVGDLSPEVTDATLF 159
NGR + G+ + V A +R++ N++V +L + D L
Sbjct: 252 NGREVSGRLLYVGRAQKRVERQNELKRRFEQMKQDRLTRYQGVNLYVKNLDDSIDDEKLR 311
Query: 160 ACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT 219
FS Y + A+VM + G S+GFGFV F + ++A A+ ++ G+ +G++ + A
Sbjct: 312 KEFSPYGVITSAKVMTE--GGHSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQ 369
Query: 220 K 220
+
Sbjct: 370 R 370
>gi|148698435|gb|EDL30382.1| mCG5546, isoform CRA_a [Mus musculus]
Length = 632
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 131/281 (46%), Gaps = 47/281 (16%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIR----KDKSSYGFIHYFDRRSAAMAILS 113
S+YVG++H+ VTE +L E FS GPV ++ R + Y ++++ A A+ +
Sbjct: 29 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 88
Query: 114 LNGRHLFGQPIKVNWAYASGQREDT---SGHFNIFVGDLSPEVTDATLFACFSVYPSCSD 170
+N + G+PI++ W+ QR+ + SG N+F+ +L + + L+ FS + +
Sbjct: 89 MNFDVMKGKPIRIMWS----QRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILS 144
Query: 171 ARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQS 230
+V+ D+ S+G+ FV F Q+ A AI + G L R++ G + ++
Sbjct: 145 CKVVCDENG--SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFV-------GRFKSRKE 195
Query: 231 SDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGV 290
+A EL + E +T VY+ N EV +L F G +
Sbjct: 196 REA----ELGAKAKE----------------FTNVYIKNFGEEVDDGNLKELFSQFGKTL 235
Query: 291 IEEVRVQRD-----KGFGFVRYSTHAEAALAIQMGNTTQSS 326
V+V RD KGFGFV Y H +A A++ N + S
Sbjct: 236 --SVKVMRDSSGKSKGFGFVSYEKHEDANKAVEEMNGKEMS 274
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 129/283 (45%), Gaps = 31/283 (10%)
Query: 52 DPSTCRS----VYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRR 105
DPS +S V++ N+ + L + FS+ G + CK++ + S Y F+H+ +
Sbjct: 107 DPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQE 166
Query: 106 SAAMAILSLNGRHLFGQPIKVNWAYASGQREDTSG-----HFNIFVGDLSPEVTDATLFA 160
+A AI +NG L + + V + +RE G N+++ + EV D L
Sbjct: 167 AADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDGNLKE 226
Query: 161 CFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATK 220
FS + +VM D +G+S+GFGFVS+ +DA A+ ++ GK + + I A K
Sbjct: 227 LFSQFGKTLSVKVMRDS-SGKSKGFGFVSYEKHEDANKAVEEMNGKEMSGKAIFVGRAQK 285
Query: 221 GAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLH 280
++Q+ EL + +E + Q +Y+ NL + L
Sbjct: 286 KV----ERQA-------ELKRKFEQLKQERISRY------QGVNLYIKNLDDTIDDEKLR 328
Query: 281 RHFHSLGAGVIEEVRVQ--RDKGFGFVRYSTHAEAALAIQMGN 321
R F G+ +V ++ R KGFGFV +S+ EA A+ N
Sbjct: 329 REFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMN 371
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 88/181 (48%), Gaps = 20/181 (11%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRK---DKSSYGFIHYFDRRSAAMAILSL 114
+VY+ N +V + L+E+FS G K++R +GF+ Y A A+ +
Sbjct: 209 NVYIKNFGEEVDDGNLKELFSQFGKTLSVKVMRDSSGKSKGFGFVSYEKHEDANKAVEEM 268
Query: 115 NGRHLFGQPIKVNWAYASGQR-------------EDTSGH--FNIFVGDLSPEVTDATLF 159
NG+ + G+ I V A +R E S + N+++ +L + D L
Sbjct: 269 NGKEMSGKAIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLR 328
Query: 160 ACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT 219
FS + S + A+VM + GRS+GFGFV F + ++A A+ ++ G+ +GS+ + A
Sbjct: 329 REFSPFGSITSAKVMLED--GRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQ 386
Query: 220 K 220
+
Sbjct: 387 R 387
>gi|358374531|dbj|GAA91122.1| mRNA binding post-transcriptional regulator [Aspergillus kawachii
IFO 4308]
Length = 402
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 92/302 (30%), Positives = 147/302 (48%), Gaps = 32/302 (10%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS----YGFIHYFDRRSAAMAILS 113
++++G + + E ++ ++ G K+IR S Y F+ F +AA LS
Sbjct: 67 TLWMGELEPWIDENFVRNLWFQMGEQVNVKMIRDKFSGSNAGYCFVD-FASPAAAAKALS 125
Query: 114 LNGRHL--FGQPIKVNWAYASG----QREDTSGHFNIFVGDLSPEVTDATLFACF-SVYP 166
LNG + + K+NWA G R+D ++IFVGDL PEV + L + F S +P
Sbjct: 126 LNGTPMPNTNRLFKLNWATGGGLADRSRDDRGPEYSIFVGDLGPEVNEYVLVSLFQSRFP 185
Query: 167 SCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNE 226
SC A++M D +G SRG+GFV F ++ D Q A++++ G + G+R +R + AT +
Sbjct: 186 SCKSAKIMTDPISGMSRGYGFVRFSDENDQQRALSEMQGVYCGNRPMRISTATP-----K 240
Query: 227 DKQSSDAKSVVELTNGSS-----EDGKETTNTEAPE-----NNPQYTTVYVGNLAPEVTQ 276
+K S + G + AP+ +P TTV+VG L+ VT+
Sbjct: 241 NKGPSLGAAGAMGMPGPAGMYPPMGAPPMGFYGAPQPMNQFTDPNNTTVFVGGLSGYVTE 300
Query: 277 LDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCS 336
+L F G G I V++ KG GFV++ A +AI N Q + +++ S
Sbjct: 301 DELRSFFQ--GFGEITYVKIPPGKGCGFVQFVQRHAAEMAI---NQMQGYPIGNSRVRLS 355
Query: 337 WG 338
WG
Sbjct: 356 WG 357
Score = 38.5 bits (88), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 45/203 (22%), Positives = 86/203 (42%), Gaps = 37/203 (18%)
Query: 140 GHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSA 199
G +++G+L P + + + + + +++ D+ +G + G+ FV F + A A
Sbjct: 64 GKTTLWMGELEPWIDENFVRNLWFQMGEQVNVKMIRDKFSGSNAGYCFVDFASPAAAAKA 123
Query: 200 IN-DLTGKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPEN 258
++ + T +R + NWAT G L + S +D
Sbjct: 124 LSLNGTPMPNTNRLFKLNWATGGG----------------LADRSRDD-----------R 156
Query: 259 NPQYTTVYVGNLAPEVTQLDLHRHFHSL-----GAGVIEEVRVQRDKGFGFVRYSTHAEA 313
P+Y+ ++VG+L PEV + L F S A ++ + +G+GFVR+S +
Sbjct: 157 GPEYS-IFVGDLGPEVNEYVLVSLFQSRFPSCKSAKIMTDPISGMSRGYGFVRFSDENDQ 215
Query: 314 ALAIQMGNTTQSSYLFGKQMKCS 336
A+ + Q Y + M+ S
Sbjct: 216 QRAL---SEMQGVYCGNRPMRIS 235
>gi|73992493|ref|XP_534430.2| PREDICTED: poly(A) binding protein, cytoplasmic 1-like [Canis lupus
familiaris]
Length = 611
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 85/288 (29%), Positives = 133/288 (46%), Gaps = 46/288 (15%)
Query: 49 PGFDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIR----KDKSSYGFIHYFDR 104
PGF S+YVG++H VTE +L E FS GP+ ++ R + Y +I++
Sbjct: 6 PGF---PLASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQP 62
Query: 105 RSAAMAILSLNGRHLFGQPIKVNWAYAS-GQREDTSGHFNIFVGDLSPEVTDATLFACFS 163
A A+ ++N + GQPI++ W+ G R+ SG NIF+ +L + + L+ FS
Sbjct: 63 ADAERALDTMNFEVIKGQPIRIMWSQRDPGLRK--SGVGNIFIKNLEDSIDNKALYDTFS 120
Query: 164 VYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAG 223
+ + +V+ D SRGFGFV F + AQ AI + G L R++ G
Sbjct: 121 TFGNILSCKVVCDDHG--SRGFGFVHFETHEAAQQAITTMNGMLLNDRKVFV-------G 171
Query: 224 NNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHF 283
+ + ++ + VEL + E +T +YV NL +V + L F
Sbjct: 172 HFKSRRERE----VELGARAME----------------FTNIYVKNLHVDVDEQGLQDLF 211
Query: 284 HSLGAGVIEEVRVQRD-----KGFGFVRYSTHAEAALAIQMGNTTQSS 326
G + V+V RD +GFGFV + H EA A+ N + S
Sbjct: 212 SRFGK--MLSVKVMRDDSGHSRGFGFVNFQKHEEAQKAVMDMNGKEVS 257
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 81/284 (28%), Positives = 130/284 (45%), Gaps = 31/284 (10%)
Query: 49 PGFDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRRS 106
PG S ++++ N+ + L + FS+ G + CK++ D S +GF+H+ +
Sbjct: 91 PGLRKSGVGNIFIKNLEDSIDNKALYDTFSTFGNILSCKVVCDDHGSRGFGFVHFETHEA 150
Query: 107 AAMAILSLNGRHLFGQPIKVNWAYASGQREDTSG-----HFNIFVGDLSPEVTDATLFAC 161
A AI ++NG L + + V + +RE G NI+V +L +V + L
Sbjct: 151 AQQAITTMNGMLLNDRKVFVGHFKSRREREVELGARAMEFTNIYVKNLHVDVDEQGLQDL 210
Query: 162 FSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKG 221
FS + +VM D +G SRGFGFV+F+ ++AQ A+ D+ GK + R + A K
Sbjct: 211 FSRFGKMLSVKVMRDD-SGHSRGFGFVNFQKHEEAQKAVMDMNGKEVSGRLLYVGRAQKR 269
Query: 222 AGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHR 281
++QS + +L K+ T Q +YV NL + L +
Sbjct: 270 V----ERQSELKRRFEQL--------KQDRLTRY-----QGVNLYVKNLDDSIDDEKLRK 312
Query: 282 HFHSLGAGVIEEVRVQRD----KGFGFVRYSTHAEAALAIQMGN 321
F GVI +V + KGFGFV +S+ EA A+ N
Sbjct: 313 EFSPY--GVITSAKVMTEGGHSKGFGFVCFSSPEEATKAVTEMN 354
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 89/181 (49%), Gaps = 20/181 (11%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDK---SSYGFIHYFDRRSAAMAILSL 114
++YV N+H V E LQ++FS G + K++R D +GF+++ A A++ +
Sbjct: 192 NIYVKNLHVDVDEQGLQDLFSRFGKMLSVKVMRDDSGHSRGFGFVNFQKHEEAQKAVMDM 251
Query: 115 NGRHLFGQPIKVNWAYASGQREDTSGH---------------FNIFVGDLSPEVTDATLF 159
NG+ + G+ + V A +R+ N++V +L + D L
Sbjct: 252 NGKEVSGRLLYVGRAQKRVERQSELKRRFEQLKQDRLTRYQGVNLYVKNLDDSIDDEKLR 311
Query: 160 ACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT 219
FS Y + A+VM + G S+GFGFV F + ++A A+ ++ G+ LG++ + A
Sbjct: 312 KEFSPYGVITSAKVMTE--GGHSKGFGFVCFSSPEEATKAVTEMNGRILGTKPLYVALAQ 369
Query: 220 K 220
+
Sbjct: 370 R 370
>gi|348513241|ref|XP_003444151.1| PREDICTED: polyadenylate-binding protein 1-like isoform 2
[Oreochromis niloticus]
Length = 637
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 79/279 (28%), Positives = 130/279 (46%), Gaps = 31/279 (11%)
Query: 52 DPSTCRS----VYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRR 105
DPS +S +++ N+ + L + FS+ G + CK++ + S YGF+H+ +
Sbjct: 90 DPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQE 149
Query: 106 SAAMAILSLNGRHLFGQPIKVNWAYASGQREDTSG-----HFNIFVGDLSPEVTDATLFA 160
+A AI +NG L + + V + +RE G N+++ + E+ D L
Sbjct: 150 AAERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGDEMDDEKLRE 209
Query: 161 CFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATK 220
FS Y + RVM D+ G+SRGFGFVSF +DAQ A++++ GK + + + A K
Sbjct: 210 LFSKYGNAMSIRVMTDE-NGKSRGFGFVSFERHEDAQKAVDEMNGKEMNGKLMYVGRAQK 268
Query: 221 GAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLH 280
++Q+ + E K+ T Q +YV NL + L
Sbjct: 269 KV----ERQTELKRKF--------EQMKQDRMTRY-----QGVNLYVKNLDDGIDDERLR 311
Query: 281 RHFHSLGAGVIEEVRVQ--RDKGFGFVRYSTHAEAALAI 317
+ F G +V ++ R KGFGFV +S+ EA A+
Sbjct: 312 KEFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAV 350
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 73/276 (26%), Positives = 126/276 (45%), Gaps = 47/276 (17%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIR----KDKSSYGFIHYFDRRSAAMAILS 113
S+YVG++H VTE +L E FS G + ++ R + Y ++++ A A+ +
Sbjct: 12 SLYVGDLHQDVTEAMLYEKFSPAGAILSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 114 LNGRHLFGQPIKVNWAYASGQREDT---SGHFNIFVGDLSPEVTDATLFACFSVYPSCSD 170
+N + GQP+++ W+ QR+ + SG NIF+ +L + + L+ FS + +
Sbjct: 72 MNFDVIKGQPVRIMWS----QRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 171 ARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQS 230
+V+ D+ S+G+GFV F Q+ A+ AI + G L R++ G + ++
Sbjct: 128 CKVVCDENG--SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFV-------GRFKSRKE 178
Query: 231 SDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGV 290
+A EL + E +T VY+ N E+ L F G +
Sbjct: 179 REA----ELGARAKE----------------FTNVYIKNFGDEMDDEKLRELFSKYGNAM 218
Query: 291 IEEVRVQRD-----KGFGFVRYSTHAEAALAIQMGN 321
+RV D +GFGFV + H +A A+ N
Sbjct: 219 --SIRVMTDENGKSRGFGFVSFERHEDAQKAVDEMN 252
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 87/181 (48%), Gaps = 20/181 (11%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS---YGFIHYFDRRSAAMAILSL 114
+VY+ N ++ + L+E+FS G +++ + +GF+ + A A+ +
Sbjct: 192 NVYIKNFGDEMDDEKLRELFSKYGNAMSIRVMTDENGKSRGFGFVSFERHEDAQKAVDEM 251
Query: 115 NGRHLFGQPIKVNWAYASGQRE------------DTSGHF---NIFVGDLSPEVTDATLF 159
NG+ + G+ + V A +R+ D + N++V +L + D L
Sbjct: 252 NGKEMNGKLMYVGRAQKKVERQTELKRKFEQMKQDRMTRYQGVNLYVKNLDDGIDDERLR 311
Query: 160 ACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT 219
FS + + + A+VM + GRS+GFGFV F + ++A A+ ++ G+ + ++ + A
Sbjct: 312 KEFSPFGTITSAKVMME--GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQ 369
Query: 220 K 220
+
Sbjct: 370 R 370
>gi|13096978|gb|AAH03283.1| Poly(A) binding protein, cytoplasmic 4 [Mus musculus]
Length = 660
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 131/281 (46%), Gaps = 47/281 (16%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIR----KDKSSYGFIHYFDRRSAAMAILS 113
S+YVG++H+ VTE +L E FS GPV ++ R + Y ++++ A A+ +
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 114 LNGRHLFGQPIKVNWAYASGQREDT---SGHFNIFVGDLSPEVTDATLFACFSVYPSCSD 170
+N + G+PI++ W+ QR+ + SG N+F+ +L + + L+ FS + +
Sbjct: 72 MNFDVMKGKPIRIMWS----QRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 171 ARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQS 230
+V+ D+ S+G+ FV F Q+ A AI + G L R++ G + ++
Sbjct: 128 CKVVCDENG--SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFV-------GRFKSRKE 178
Query: 231 SDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGV 290
+A EL + E +T VY+ N EV +L F G +
Sbjct: 179 REA----ELGAKAKE----------------FTNVYIKNFGEEVDDGNLKELFSQFGKTL 218
Query: 291 IEEVRVQRD-----KGFGFVRYSTHAEAALAIQMGNTTQSS 326
V+V RD KGFGFV Y H +A A++ N + S
Sbjct: 219 --SVKVMRDSSGKSKGFGFVSYEKHEDANKAVEEMNGKEMS 257
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 129/283 (45%), Gaps = 31/283 (10%)
Query: 52 DPSTCRS----VYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRR 105
DPS +S V++ N+ + L + FS+ G + CK++ + S Y F+H+ +
Sbjct: 90 DPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQE 149
Query: 106 SAAMAILSLNGRHLFGQPIKVNWAYASGQREDTSG-----HFNIFVGDLSPEVTDATLFA 160
+A AI +NG L + + V + +RE G N+++ + EV D L
Sbjct: 150 AADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDGNLKE 209
Query: 161 CFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATK 220
FS + +VM D +G+S+GFGFVS+ +DA A+ ++ GK + + I A K
Sbjct: 210 LFSQFGKTLSVKVMRDS-SGKSKGFGFVSYEKHEDANKAVEEMNGKEMSGKAIFVGRAQK 268
Query: 221 GAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLH 280
++Q+ EL + +E + Q +Y+ NL + L
Sbjct: 269 KV----ERQA-------ELKRKFEQLKQERISRY------QGVNLYIKNLDDTIDDEKLR 311
Query: 281 RHFHSLGAGVIEEVRVQ--RDKGFGFVRYSTHAEAALAIQMGN 321
+ F G+ +V ++ R KGFGFV +S+ EA A+ N
Sbjct: 312 KEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMN 354
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 88/181 (48%), Gaps = 20/181 (11%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRK---DKSSYGFIHYFDRRSAAMAILSL 114
+VY+ N +V + L+E+FS G K++R +GF+ Y A A+ +
Sbjct: 192 NVYIKNFGEEVDDGNLKELFSQFGKTLSVKVMRDSSGKSKGFGFVSYEKHEDANKAVEEM 251
Query: 115 NGRHLFGQPIKVNWAYASGQR-------------EDTSGH--FNIFVGDLSPEVTDATLF 159
NG+ + G+ I V A +R E S + N+++ +L + D L
Sbjct: 252 NGKEMSGKAIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLR 311
Query: 160 ACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT 219
FS + S + A+VM + GRS+GFGFV F + ++A A+ ++ G+ +GS+ + A
Sbjct: 312 KEFSPFGSITSAKVMLED--GRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQ 369
Query: 220 K 220
+
Sbjct: 370 R 370
Score = 38.9 bits (89), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRRSAAMAILSLN 115
++Y+ N+ + + L++ FS G + K++ +D S +GF+ + A A+ +N
Sbjct: 295 NLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMN 354
Query: 116 GRHLFGQPIKVNWAYASGQRE 136
GR + +P+ V A +R+
Sbjct: 355 GRIVGSKPLYVALAQRKEERK 375
>gi|426391820|ref|XP_004062264.1| PREDICTED: polyadenylate-binding protein 1-like isoform 1 [Gorilla
gorilla gorilla]
Length = 614
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 83/279 (29%), Positives = 130/279 (46%), Gaps = 43/279 (15%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIR----KDKSSYGFIHYFDRRSAAMAILS 113
S+YVG++H VTE +L E FS GP+ ++ R + Y +I++ A A+ +
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADAERALDT 71
Query: 114 LNGRHLFGQPIKVNWAYAS-GQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDAR 172
+N L GQPI++ W+ G R+ SG NIF+ +L + + L+ FS + + +
Sbjct: 72 MNFEMLKGQPIRIMWSQRDPGLRK--SGVGNIFIKNLEDSIDNKALYDTFSTFGNILSCK 129
Query: 173 VMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSSD 232
V D+ SRGFGFV F + AQ AIN + G L R++ G+ + ++ +
Sbjct: 130 VACDEHG--SRGFGFVHFETHEAAQQAINTMNGMLLNDRKV-------FVGHFKSRRERE 180
Query: 233 AKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIE 292
A EL + E +T +YV NL +V + L F G +
Sbjct: 181 A----ELGARALE----------------FTNIYVKNLPVDVDEQGLQDLFSQFGKML-- 218
Query: 293 EVRVQRD-----KGFGFVRYSTHAEAALAIQMGNTTQSS 326
V+V RD + FGFV + H EA A+ N + S
Sbjct: 219 SVKVMRDNSGHSRCFGFVNFEKHEEAQKAVVHMNGKEVS 257
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 77/285 (27%), Positives = 122/285 (42%), Gaps = 33/285 (11%)
Query: 49 PGFDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRRS 106
PG S ++++ N+ + L + FS+ G + CK+ + S +GF+H+ +
Sbjct: 91 PGLRKSGVGNIFIKNLEDSIDNKALYDTFSTFGNILSCKVACDEHGSRGFGFVHFETHEA 150
Query: 107 AAMAILSLNGRHLFGQPIKVNWAYASGQREDTSG-----HFNIFVGDLSPEVTDATLFAC 161
A AI ++NG L + + V + +RE G NI+V +L +V + L
Sbjct: 151 AQQAINTMNGMLLNDRKVFVGHFKSRREREAELGARALEFTNIYVKNLPVDVDEQGLQDL 210
Query: 162 FSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKG 221
FS + +VM D +G SR FGFV+F ++AQ A+ + GK + R + A K
Sbjct: 211 FSQFGKMLSVKVMRD-NSGHSRCFGFVNFEKHEEAQKAVVHMNGKEVSGRLLYAGRAQKR 269
Query: 222 AGN-NEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLH 280
NE K+ + L Q +YV NL + L
Sbjct: 270 VERQNELKRRFEQMKQDRL------------------RRYQGVNLYVKNLDDSIDDDKLR 311
Query: 281 RHFHSLGAGVIEEVRVQRD----KGFGFVRYSTHAEAALAIQMGN 321
+ F GVI +V + KGFGFV +S+ EA A+ N
Sbjct: 312 KEFSPY--GVITSAKVMTEGGHSKGFGFVCFSSPEEATKAVTEMN 354
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 88/181 (48%), Gaps = 20/181 (11%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDK---SSYGFIHYFDRRSAAMAILSL 114
++YV N+ V E LQ++FS G + K++R + +GF+++ A A++ +
Sbjct: 192 NIYVKNLPVDVDEQGLQDLFSQFGKMLSVKVMRDNSGHSRCFGFVNFEKHEEAQKAVVHM 251
Query: 115 NGRHLFGQPIKVNWAYASGQREDTSGH---------------FNIFVGDLSPEVTDATLF 159
NG+ + G+ + A +R++ N++V +L + D L
Sbjct: 252 NGKEVSGRLLYAGRAQKRVERQNELKRRFEQMKQDRLRRYQGVNLYVKNLDDSIDDDKLR 311
Query: 160 ACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT 219
FS Y + A+VM + G S+GFGFV F + ++A A+ ++ G+ +G++ + A
Sbjct: 312 KEFSPYGVITSAKVMTE--GGHSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQ 369
Query: 220 K 220
+
Sbjct: 370 R 370
>gi|45201218|ref|NP_986788.1| AGR122Cp [Ashbya gossypii ATCC 10895]
gi|74691820|sp|Q74ZS6.1|PABP_ASHGO RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=Polyadenylate tail-binding protein
gi|44986072|gb|AAS54612.1| AGR122Cp [Ashbya gossypii ATCC 10895]
gi|374110037|gb|AEY98942.1| FAGR122Cp [Ashbya gossypii FDAG1]
Length = 585
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/277 (27%), Positives = 130/277 (46%), Gaps = 42/277 (15%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS----YGFIHYFDRRSAAMAILS 113
S+YVG + V+E LL ++FS G V ++ R ++ Y ++++ D + AI
Sbjct: 39 SLYVGELEPTVSEALLYDIFSPIGSVSSIRVCRDAITNTSLGYAYVNFHDHEAGPKAIEQ 98
Query: 114 LNGRHLFGQPIKVNWAYASGQREDT---SGHFNIFVGDLSPEVTDATLFACFSVYPSCSD 170
LN + G+P ++ W+ QR+ + G NI++ +L P + + +L FS + +
Sbjct: 99 LNYTLIKGKPCRIMWS----QRDPSLRKKGSGNIYIKNLHPAIDNKSLHETFSTFGNILS 154
Query: 171 ARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQS 230
+V D+ G SRGFGFV F N+ DA+ AI + G + +++ + +D+QS
Sbjct: 155 CKVATDE-NGVSRGFGFVHFENESDARDAIEAVDGMLMNDQEVYVALHV----SKKDRQS 209
Query: 231 SDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLG--- 287
+ E ++T VYV N+ E +Q + F G
Sbjct: 210 -----------------------KLEEVKAKFTNVYVKNIDQETSQEEFEELFGKYGKIT 246
Query: 288 AGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQ 324
+ V+E+ + +GFGFV + HA AA A+ N +
Sbjct: 247 SAVLEKDSEGKLRGFGFVNFEDHAAAAKAVDELNELE 283
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 80/164 (48%), Gaps = 21/164 (12%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS----YGFIHYFDRRSAAMAILS 113
+VYV NI + ++ +E+F G + ++ KD +GF+++ D +AA A+
Sbjct: 220 NVYVKNIDQETSQEEFEELFGKYGKITSA-VLEKDSEGKLRGFGFVNFEDHAAAAKAVDE 278
Query: 114 LNGRHLFGQPIKVNWA-------------YASGQREDTSGH--FNIFVGDLSPEVTDATL 158
LN GQ + V A Y + + E + + N+FV +L + D L
Sbjct: 279 LNELEFKGQKLYVGRAQKKYERLQELKKQYEAARLEKLAKYQGVNLFVKNLDDSIDDEKL 338
Query: 159 FACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAIND 202
F+ + + + A+VM D+ TG SRGFGFV F ++A AI +
Sbjct: 339 KEEFAPFGTITSAKVMRDE-TGNSRGFGFVCFSTPEEATKAITE 381
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 45/97 (46%), Gaps = 11/97 (11%)
Query: 250 TTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDK------GFG 303
TT +E P+ ++YVG L P V++ L+ F +G+ + +RV RD G+
Sbjct: 25 TTESETPKVETSGASLYVGELEPTVSEALLYDIFSPIGS--VSSIRVCRDAITNTSLGYA 82
Query: 304 FVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSK 340
+V + H AI+ N T + GK + W +
Sbjct: 83 YVNFHDHEAGPKAIEQLNYT---LIKGKPCRIMWSQR 116
>gi|354485887|ref|XP_003505113.1| PREDICTED: polyadenylate-binding protein 4-like [Cricetulus
griseus]
Length = 685
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 131/281 (46%), Gaps = 47/281 (16%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIR----KDKSSYGFIHYFDRRSAAMAILS 113
S+YVG++H+ VTE +L E FS GPV ++ R + Y ++++ A A+ +
Sbjct: 34 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 93
Query: 114 LNGRHLFGQPIKVNWAYASGQREDT---SGHFNIFVGDLSPEVTDATLFACFSVYPSCSD 170
+N + G+PI++ W+ QR+ + SG N+F+ +L + + L+ FS + +
Sbjct: 94 MNFDVIKGKPIRIMWS----QRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILS 149
Query: 171 ARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQS 230
+V+ D+ S+G+ FV F Q+ A AI + G L R++ G + ++
Sbjct: 150 CKVVCDENG--SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFV-------GRFKSRKE 200
Query: 231 SDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGV 290
+A EL + E +T VY+ N EV +L F G +
Sbjct: 201 REA----ELGAKAKE----------------FTNVYIKNFGEEVDDDNLKELFSQFGKTL 240
Query: 291 IEEVRVQRD-----KGFGFVRYSTHAEAALAIQMGNTTQSS 326
V+V RD KGFGFV Y H +A A++ N + S
Sbjct: 241 --SVKVMRDPSGKSKGFGFVSYEKHEDANKAVEEMNGKEMS 279
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 129/283 (45%), Gaps = 31/283 (10%)
Query: 52 DPSTCRS----VYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRR 105
DPS +S V++ N+ + L + FS+ G + CK++ + S Y F+H+ +
Sbjct: 112 DPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQE 171
Query: 106 SAAMAILSLNGRHLFGQPIKVNWAYASGQREDTSG-----HFNIFVGDLSPEVTDATLFA 160
+A AI +NG L + + V + +RE G N+++ + EV D L
Sbjct: 172 AADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDDNLKE 231
Query: 161 CFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATK 220
FS + +VM D +G+S+GFGFVS+ +DA A+ ++ GK + + I A K
Sbjct: 232 LFSQFGKTLSVKVMRD-PSGKSKGFGFVSYEKHEDANKAVEEMNGKEMSGKAIFVGRAQK 290
Query: 221 GAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLH 280
++Q+ EL + +E + Q +Y+ NL + L
Sbjct: 291 KV----ERQA-------ELKRKFEQLKQERISRY------QGVNLYIKNLDDTIDDEKLR 333
Query: 281 RHFHSLGAGVIEEVRVQ--RDKGFGFVRYSTHAEAALAIQMGN 321
+ F G+ +V ++ R KGFGFV +S+ EA A+ N
Sbjct: 334 KEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMN 376
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 88/181 (48%), Gaps = 20/181 (11%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRK---DKSSYGFIHYFDRRSAAMAILSL 114
+VY+ N +V + L+E+FS G K++R +GF+ Y A A+ +
Sbjct: 214 NVYIKNFGEEVDDDNLKELFSQFGKTLSVKVMRDPSGKSKGFGFVSYEKHEDANKAVEEM 273
Query: 115 NGRHLFGQPIKVNWAYASGQR-------------EDTSGH--FNIFVGDLSPEVTDATLF 159
NG+ + G+ I V A +R E S + N+++ +L + D L
Sbjct: 274 NGKEMSGKAIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLR 333
Query: 160 ACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT 219
FS + S + A+VM + GRS+GFGFV F + ++A A+ ++ G+ +GS+ + A
Sbjct: 334 KEFSPFGSITSAKVMLED--GRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQ 391
Query: 220 K 220
+
Sbjct: 392 R 392
Score = 38.9 bits (89), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRRSAAMAILSLN 115
++Y+ N+ + + L++ FS G + K++ +D S +GF+ + A A+ +N
Sbjct: 317 NLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMN 376
Query: 116 GRHLFGQPIKVNWAYASGQRE 136
GR + +P+ V A +R+
Sbjct: 377 GRIVGSKPLYVALAQRKEERK 397
>gi|440899695|gb|ELR50961.1| Polyadenylate-binding protein 1-like protein, partial [Bos
grunniens mutus]
Length = 618
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 82/279 (29%), Positives = 133/279 (47%), Gaps = 43/279 (15%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIR----KDKSSYGFIHYFDRRSAAMAILS 113
S+YVG++H VTE +L E FS GP+ ++ R + Y +I++ A A+ +
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADAERALDT 71
Query: 114 LNGRHLFGQPIKVNWAYAS-GQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDAR 172
+N + GQPI++ W+ G R+ SG NIF+ +L + + L+ FS + + +
Sbjct: 72 MNFEVIKGQPIRIMWSQRDPGLRK--SGVGNIFIKNLEDSIDNKALYDTFSTFGNILSCK 129
Query: 173 VMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSSD 232
V+ D+ SRGFGFV F + AQ+AI+ + G L R++ G+ + ++ +
Sbjct: 130 VVCDEHG--SRGFGFVHFETHEAAQNAISTMNGMLLNDRKVF-------VGHFKSRRERE 180
Query: 233 AKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIE 292
VEL + E +T +YV NL +V + L F G +
Sbjct: 181 ----VELGARAME----------------FTNIYVKNLHVDVDEQRLQDLFSQFGK--ML 218
Query: 293 EVRVQRD-----KGFGFVRYSTHAEAALAIQMGNTTQSS 326
V+V RD +GFGFV + H EA A+ N + S
Sbjct: 219 SVKVMRDVSGHSRGFGFVNFEKHEEAQKAVVNMNGREVS 257
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 78/285 (27%), Positives = 126/285 (44%), Gaps = 33/285 (11%)
Query: 49 PGFDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRRS 106
PG S ++++ N+ + L + FS+ G + CK++ + S +GF+H+ +
Sbjct: 91 PGLRKSGVGNIFIKNLEDSIDNKALYDTFSTFGNILSCKVVCDEHGSRGFGFVHFETHEA 150
Query: 107 AAMAILSLNGRHLFGQPIKVNWAYASGQREDTSG-----HFNIFVGDLSPEVTDATLFAC 161
A AI ++NG L + + V + +RE G NI+V +L +V + L
Sbjct: 151 AQNAISTMNGMLLNDRKVFVGHFKSRREREVELGARAMEFTNIYVKNLHVDVDEQRLQDL 210
Query: 162 FSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKG 221
FS + +VM D +G SRGFGFV+F ++AQ A+ ++ G+ + R + A K
Sbjct: 211 FSQFGKMLSVKVMRDV-SGHSRGFGFVNFEKHEEAQKAVVNMNGREVSGRLLYVGRAQKR 269
Query: 222 AGN-NEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLH 280
NE K+ + LT Q +YV NL + L
Sbjct: 270 VERQNELKRRFEQMKQDRLTRY------------------QGVNLYVKNLDDSIDDEKLR 311
Query: 281 RHFHSLGAGVIEEVRVQRD----KGFGFVRYSTHAEAALAIQMGN 321
+ F GVI +V + KGFGFV +S+ EA A+ N
Sbjct: 312 KEFSPY--GVITSAKVMTEGGHSKGFGFVCFSSPEEATKAVTEMN 354
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 89/179 (49%), Gaps = 20/179 (11%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRK---DKSSYGFIHYFDRRSAAMAILSL 114
++YV N+H V E LQ++FS G + K++R +GF+++ A A++++
Sbjct: 192 NIYVKNLHVDVDEQRLQDLFSQFGKMLSVKVMRDVSGHSRGFGFVNFEKHEEAQKAVVNM 251
Query: 115 NGRHLFGQPIKVNWAYASGQREDTSGH---------------FNIFVGDLSPEVTDATLF 159
NGR + G+ + V A +R++ N++V +L + D L
Sbjct: 252 NGREVSGRLLYVGRAQKRVERQNELKRRFEQMKQDRLTRYQGVNLYVKNLDDSIDDEKLR 311
Query: 160 ACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWA 218
FS Y + A+VM + G S+GFGFV F + ++A A+ ++ G+ +G++ + A
Sbjct: 312 KEFSPYGVITSAKVMTE--GGHSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALA 368
>gi|34419622|ref|NP_570951.2| polyadenylate-binding protein 4 isoform 1 [Mus musculus]
gi|33991671|gb|AAH56432.1| Poly(A) binding protein, cytoplasmic 4 [Mus musculus]
gi|148698437|gb|EDL30384.1| mCG5546, isoform CRA_c [Mus musculus]
Length = 660
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 131/281 (46%), Gaps = 47/281 (16%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIR----KDKSSYGFIHYFDRRSAAMAILS 113
S+YVG++H+ VTE +L E FS GPV ++ R + Y ++++ A A+ +
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 114 LNGRHLFGQPIKVNWAYASGQREDT---SGHFNIFVGDLSPEVTDATLFACFSVYPSCSD 170
+N + G+PI++ W+ QR+ + SG N+F+ +L + + L+ FS + +
Sbjct: 72 MNFDVMKGKPIRIMWS----QRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 171 ARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQS 230
+V+ D+ S+G+ FV F Q+ A AI + G L R++ G + ++
Sbjct: 128 CKVVCDENG--SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFV-------GRFKSRKE 178
Query: 231 SDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGV 290
+A EL + E +T VY+ N EV +L F G +
Sbjct: 179 REA----ELGAKAKE----------------FTNVYIKNFGEEVDDGNLKELFSQFGKTL 218
Query: 291 IEEVRVQRD-----KGFGFVRYSTHAEAALAIQMGNTTQSS 326
V+V RD KGFGFV Y H +A A++ N + S
Sbjct: 219 --SVKVMRDSSGKSKGFGFVSYEKHEDANKAVEEMNGKEMS 257
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 129/283 (45%), Gaps = 31/283 (10%)
Query: 52 DPSTCRS----VYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRR 105
DPS +S V++ N+ + L + FS+ G + CK++ + S Y F+H+ +
Sbjct: 90 DPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQE 149
Query: 106 SAAMAILSLNGRHLFGQPIKVNWAYASGQREDTSG-----HFNIFVGDLSPEVTDATLFA 160
+A AI +NG L + + V + +RE G N+++ + EV D L
Sbjct: 150 AADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDGNLKE 209
Query: 161 CFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATK 220
FS + +VM D +G+S+GFGFVS+ +DA A+ ++ GK + + I A K
Sbjct: 210 LFSQFGKTLSVKVMRDS-SGKSKGFGFVSYEKHEDANKAVEEMNGKEMSGKAIFVGRAQK 268
Query: 221 GAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLH 280
++Q+ EL + +E + Q +Y+ NL + L
Sbjct: 269 KV----ERQA-------ELKRKFEQLKQERISRY------QGVNLYIKNLDDTIDDEKLR 311
Query: 281 RHFHSLGAGVIEEVRVQ--RDKGFGFVRYSTHAEAALAIQMGN 321
R F G+ +V ++ R KGFGFV +S+ EA A+ N
Sbjct: 312 REFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMN 354
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 88/181 (48%), Gaps = 20/181 (11%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRK---DKSSYGFIHYFDRRSAAMAILSL 114
+VY+ N +V + L+E+FS G K++R +GF+ Y A A+ +
Sbjct: 192 NVYIKNFGEEVDDGNLKELFSQFGKTLSVKVMRDSSGKSKGFGFVSYEKHEDANKAVEEM 251
Query: 115 NGRHLFGQPIKVNWAYASGQR-------------EDTSGH--FNIFVGDLSPEVTDATLF 159
NG+ + G+ I V A +R E S + N+++ +L + D L
Sbjct: 252 NGKEMSGKAIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLR 311
Query: 160 ACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT 219
FS + S + A+VM + GRS+GFGFV F + ++A A+ ++ G+ +GS+ + A
Sbjct: 312 REFSPFGSITSAKVMLED--GRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQ 369
Query: 220 K 220
+
Sbjct: 370 R 370
>gi|185135971|ref|NP_001118228.1| polyadenylate-binding protein 1-like [Homo sapiens]
gi|74754038|sp|Q4VXU2.1|PAP1L_HUMAN RecName: Full=Polyadenylate-binding protein 1-like
gi|119596298|gb|EAW75892.1| hCG2019100, isoform CRA_f [Homo sapiens]
Length = 614
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 83/279 (29%), Positives = 130/279 (46%), Gaps = 43/279 (15%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIR----KDKSSYGFIHYFDRRSAAMAILS 113
S+YVG++H VTE +L E FS GP+ ++ R + Y +I++ A A+ +
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADAERALDT 71
Query: 114 LNGRHLFGQPIKVNWAYAS-GQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDAR 172
+N L GQPI++ W+ G R+ SG NIF+ +L + + L+ FS + + +
Sbjct: 72 MNFEMLKGQPIRIMWSQRDPGLRK--SGVGNIFIKNLEDSIDNKALYDTFSTFGNILSCK 129
Query: 173 VMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSSD 232
V D+ SRGFGFV F + AQ AIN + G L R++ G+ + ++ +
Sbjct: 130 VACDEHG--SRGFGFVHFETHEAAQQAINTMNGMLLNDRKV-------FVGHFKSRRERE 180
Query: 233 AKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIE 292
A EL + E +T +YV NL +V + L F G +
Sbjct: 181 A----ELGARALE----------------FTNIYVKNLPVDVDEQGLQDLFSQFGKML-- 218
Query: 293 EVRVQRD-----KGFGFVRYSTHAEAALAIQMGNTTQSS 326
V+V RD + FGFV + H EA A+ N + S
Sbjct: 219 SVKVMRDNSGHSRCFGFVNFEKHEEAQKAVVHMNGKEVS 257
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 77/285 (27%), Positives = 122/285 (42%), Gaps = 33/285 (11%)
Query: 49 PGFDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRRS 106
PG S ++++ N+ + L + FS+ G + CK+ + S +GF+H+ +
Sbjct: 91 PGLRKSGVGNIFIKNLEDSIDNKALYDTFSTFGNILSCKVACDEHGSRGFGFVHFETHEA 150
Query: 107 AAMAILSLNGRHLFGQPIKVNWAYASGQREDTSG-----HFNIFVGDLSPEVTDATLFAC 161
A AI ++NG L + + V + +RE G NI+V +L +V + L
Sbjct: 151 AQQAINTMNGMLLNDRKVFVGHFKSRREREAELGARALEFTNIYVKNLPVDVDEQGLQDL 210
Query: 162 FSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKG 221
FS + +VM D +G SR FGFV+F ++AQ A+ + GK + R + A K
Sbjct: 211 FSQFGKMLSVKVMRD-NSGHSRCFGFVNFEKHEEAQKAVVHMNGKEVSGRLLYAGRAQKR 269
Query: 222 AGN-NEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLH 280
NE K+ + L Q +YV NL + L
Sbjct: 270 VERQNELKRRFEQMKQDRL------------------RRYQGVNLYVKNLDDSIDDDKLR 311
Query: 281 RHFHSLGAGVIEEVRVQRD----KGFGFVRYSTHAEAALAIQMGN 321
+ F GVI +V + KGFGFV +S+ EA A+ N
Sbjct: 312 KEFSPY--GVITSAKVMTEGGHSKGFGFVCFSSPEEATKAVTEMN 354
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 88/181 (48%), Gaps = 20/181 (11%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDK---SSYGFIHYFDRRSAAMAILSL 114
++YV N+ V E LQ++FS G + K++R + +GF+++ A A++ +
Sbjct: 192 NIYVKNLPVDVDEQGLQDLFSQFGKMLSVKVMRDNSGHSRCFGFVNFEKHEEAQKAVVHM 251
Query: 115 NGRHLFGQPIKVNWAYASGQREDTSGH---------------FNIFVGDLSPEVTDATLF 159
NG+ + G+ + A +R++ N++V +L + D L
Sbjct: 252 NGKEVSGRLLYAGRAQKRVERQNELKRRFEQMKQDRLRRYQGVNLYVKNLDDSIDDDKLR 311
Query: 160 ACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT 219
FS Y + A+VM + G S+GFGFV F + ++A A+ ++ G+ +G++ + A
Sbjct: 312 KEFSPYGVITSAKVMTE--GGHSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQ 369
Query: 220 K 220
+
Sbjct: 370 R 370
>gi|335291035|ref|XP_003127861.2| PREDICTED: polyadenylate-binding protein 4 isoform 1 [Sus scrofa]
Length = 644
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 131/281 (46%), Gaps = 47/281 (16%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIR----KDKSSYGFIHYFDRRSAAMAILS 113
S+YVG++H+ VTE +L E FS GPV ++ R + Y ++++ A A+ +
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 114 LNGRHLFGQPIKVNWAYASGQREDT---SGHFNIFVGDLSPEVTDATLFACFSVYPSCSD 170
+N + G+PI++ W+ QR+ + SG N+F+ +L + + L+ FS + +
Sbjct: 72 MNFDVIKGKPIRIMWS----QRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 171 ARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQS 230
+V+ D+ S+G+ FV F Q+ A AI + G L R++ G + ++
Sbjct: 128 CKVVCDENG--SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFV-------GRFKSRKE 178
Query: 231 SDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGV 290
+A EL + E +T VY+ N EV +L F G +
Sbjct: 179 REA----ELGAKAKE----------------FTNVYIKNFGEEVDDENLKELFSQFGKTL 218
Query: 291 IEEVRVQRD-----KGFGFVRYSTHAEAALAIQMGNTTQSS 326
V+V RD KGFGFV Y H +A A++ N + S
Sbjct: 219 --SVKVMRDPSGKSKGFGFVSYEKHEDANKAVEEMNGKEIS 257
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 129/283 (45%), Gaps = 31/283 (10%)
Query: 52 DPSTCRS----VYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRR 105
DPS +S V++ N+ + L + FS+ G + CK++ + S Y F+H+ +
Sbjct: 90 DPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQE 149
Query: 106 SAAMAILSLNGRHLFGQPIKVNWAYASGQREDTSG-----HFNIFVGDLSPEVTDATLFA 160
+A AI +NG L + + V + +RE G N+++ + EV D L
Sbjct: 150 AADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDENLKE 209
Query: 161 CFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATK 220
FS + +VM D +G+S+GFGFVS+ +DA A+ ++ GK + + I A K
Sbjct: 210 LFSQFGKTLSVKVMRD-PSGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKVIFVGRAQK 268
Query: 221 GAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLH 280
++Q+ EL + +E + Q +Y+ NL + L
Sbjct: 269 KV----ERQA-------ELKRKFEQLKQERISRY------QGVNLYIKNLDDTIDDEKLR 311
Query: 281 RHFHSLGAGVIEEVRVQ--RDKGFGFVRYSTHAEAALAIQMGN 321
+ F G+ +V ++ R KGFGFV +S+ EA A+ N
Sbjct: 312 KEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMN 354
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 88/181 (48%), Gaps = 20/181 (11%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRK---DKSSYGFIHYFDRRSAAMAILSL 114
+VY+ N +V + L+E+FS G K++R +GF+ Y A A+ +
Sbjct: 192 NVYIKNFGEEVDDENLKELFSQFGKTLSVKVMRDPSGKSKGFGFVSYEKHEDANKAVEEM 251
Query: 115 NGRHLFGQPIKVNWAYASGQR-------------EDTSGH--FNIFVGDLSPEVTDATLF 159
NG+ + G+ I V A +R E S + N+++ +L + D L
Sbjct: 252 NGKEISGKVIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLR 311
Query: 160 ACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT 219
FS + S + A+VM + GRS+GFGFV F + ++A A+ ++ G+ +GS+ + A
Sbjct: 312 KEFSPFGSITSAKVMLED--GRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQ 369
Query: 220 K 220
+
Sbjct: 370 R 370
Score = 38.9 bits (89), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRRSAAMAILSLN 115
++Y+ N+ + + L++ FS G + K++ +D S +GF+ + A A+ +N
Sbjct: 295 NLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMN 354
Query: 116 GRHLFGQPIKVNWAYASGQRE 136
GR + +P+ V A +R+
Sbjct: 355 GRIVGSKPLYVALAQRKEERK 375
>gi|348513239|ref|XP_003444150.1| PREDICTED: polyadenylate-binding protein 1-like isoform 1
[Oreochromis niloticus]
Length = 634
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 79/279 (28%), Positives = 130/279 (46%), Gaps = 31/279 (11%)
Query: 52 DPSTCRS----VYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRR 105
DPS +S +++ N+ + L + FS+ G + CK++ + S YGF+H+ +
Sbjct: 90 DPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQE 149
Query: 106 SAAMAILSLNGRHLFGQPIKVNWAYASGQREDTSG-----HFNIFVGDLSPEVTDATLFA 160
+A AI +NG L + + V + +RE G N+++ + E+ D L
Sbjct: 150 AAERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGDEMDDEKLRE 209
Query: 161 CFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATK 220
FS Y + RVM D+ G+SRGFGFVSF +DAQ A++++ GK + + + A K
Sbjct: 210 LFSKYGNAMSIRVMTDE-NGKSRGFGFVSFERHEDAQKAVDEMNGKEMNGKLMYVGRAQK 268
Query: 221 GAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLH 280
++Q+ + E K+ T Q +YV NL + L
Sbjct: 269 KV----ERQTELKRKF--------EQMKQDRMTRY-----QGVNLYVKNLDDGIDDERLR 311
Query: 281 RHFHSLGAGVIEEVRVQ--RDKGFGFVRYSTHAEAALAI 317
+ F G +V ++ R KGFGFV +S+ EA A+
Sbjct: 312 KEFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAV 350
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 73/276 (26%), Positives = 126/276 (45%), Gaps = 47/276 (17%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIR----KDKSSYGFIHYFDRRSAAMAILS 113
S+YVG++H VTE +L E FS G + ++ R + Y ++++ A A+ +
Sbjct: 12 SLYVGDLHQDVTEAMLYEKFSPAGAILSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 114 LNGRHLFGQPIKVNWAYASGQREDT---SGHFNIFVGDLSPEVTDATLFACFSVYPSCSD 170
+N + GQP+++ W+ QR+ + SG NIF+ +L + + L+ FS + +
Sbjct: 72 MNFDVIKGQPVRIMWS----QRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 171 ARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQS 230
+V+ D+ S+G+GFV F Q+ A+ AI + G L R++ G + ++
Sbjct: 128 CKVVCDENG--SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFV-------GRFKSRKE 178
Query: 231 SDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGV 290
+A EL + E +T VY+ N E+ L F G +
Sbjct: 179 REA----ELGARAKE----------------FTNVYIKNFGDEMDDEKLRELFSKYGNAM 218
Query: 291 IEEVRVQRD-----KGFGFVRYSTHAEAALAIQMGN 321
+RV D +GFGFV + H +A A+ N
Sbjct: 219 --SIRVMTDENGKSRGFGFVSFERHEDAQKAVDEMN 252
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 87/181 (48%), Gaps = 20/181 (11%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS---YGFIHYFDRRSAAMAILSL 114
+VY+ N ++ + L+E+FS G +++ + +GF+ + A A+ +
Sbjct: 192 NVYIKNFGDEMDDEKLRELFSKYGNAMSIRVMTDENGKSRGFGFVSFERHEDAQKAVDEM 251
Query: 115 NGRHLFGQPIKVNWAYASGQRE------------DTSGHF---NIFVGDLSPEVTDATLF 159
NG+ + G+ + V A +R+ D + N++V +L + D L
Sbjct: 252 NGKEMNGKLMYVGRAQKKVERQTELKRKFEQMKQDRMTRYQGVNLYVKNLDDGIDDERLR 311
Query: 160 ACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT 219
FS + + + A+VM + GRS+GFGFV F + ++A A+ ++ G+ + ++ + A
Sbjct: 312 KEFSPFGTITSAKVMME--GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQ 369
Query: 220 K 220
+
Sbjct: 370 R 370
>gi|194224457|ref|XP_001500563.2| PREDICTED: poly(A) binding protein, cytoplasmic 1-like [Equus
caballus]
Length = 612
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 82/279 (29%), Positives = 129/279 (46%), Gaps = 43/279 (15%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIR----KDKSSYGFIHYFDRRSAAMAILS 113
S+YVG++H VTE +L E FS GP+ ++ R + Y +I++ A A+ +
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADAERALDT 71
Query: 114 LNGRHLFGQPIKVNWAYAS-GQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDAR 172
+N + GQPI++ W+ G R+ SG N+F+ +L + + L+ FS + + +
Sbjct: 72 MNFEVIKGQPIRIMWSQRDPGLRK--SGVGNVFIKNLEDSIDNKALYDTFSTFGNILSCK 129
Query: 173 VMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSSD 232
V+ D SRGFGFV F + AQ AI+ + G L R++ G+ + ++ +
Sbjct: 130 VVCDDHG--SRGFGFVHFETHEAAQQAISTMNGMLLNDRKV-------FVGHFKSRRERE 180
Query: 233 AKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIE 292
A E G T +T +YV NL V + L F G +
Sbjct: 181 A-----------ELGARAT---------AFTNIYVKNLPGHVDERGLQDLFSQFGK--ML 218
Query: 293 EVRVQRD-----KGFGFVRYSTHAEAALAIQMGNTTQSS 326
V+V RD +GFGFV + H EA A+ N Q S
Sbjct: 219 SVKVMRDDSGHSRGFGFVNFEKHEEAQKAVMDMNGMQVS 257
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 82/285 (28%), Positives = 125/285 (43%), Gaps = 33/285 (11%)
Query: 49 PGFDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRRS 106
PG S +V++ N+ + L + FS+ G + CK++ D S +GF+H+ +
Sbjct: 91 PGLRKSGVGNVFIKNLEDSIDNKALYDTFSTFGNILSCKVVCDDHGSRGFGFVHFETHEA 150
Query: 107 AAMAILSLNGRHLFGQPIKVNWAYASGQREDTSG-----HFNIFVGDLSPEVTDATLFAC 161
A AI ++NG L + + V + +RE G NI+V +L V + L
Sbjct: 151 AQQAISTMNGMLLNDRKVFVGHFKSRREREAELGARATAFTNIYVKNLPGHVDERGLQDL 210
Query: 162 FSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATK- 220
FS + +VM D +G SRGFGFV+F ++AQ A+ D+ G + R + A K
Sbjct: 211 FSQFGKMLSVKVMRDD-SGHSRGFGFVNFEKHEEAQKAVMDMNGMQVSGRLLYVGRAQKR 269
Query: 221 GAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLH 280
G NE K+ + L N Q +YV NL + L
Sbjct: 270 GERQNELKRRFEHTKQDRL------------------NRCQGVNLYVKNLDDSIDDEKLR 311
Query: 281 RHFHSLGAGVIEEVRVQRD----KGFGFVRYSTHAEAALAIQMGN 321
+ F GVI +V + KGFGFV +S+ EA A+ N
Sbjct: 312 KEFSPY--GVITSAKVMTEGGHSKGFGFVCFSSPEEATKAVTEMN 354
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 89/181 (49%), Gaps = 20/181 (11%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDK---SSYGFIHYFDRRSAAMAILSL 114
++YV N+ V E LQ++FS G + K++R D +GF+++ A A++ +
Sbjct: 192 NIYVKNLPGHVDERGLQDLFSQFGKMLSVKVMRDDSGHSRGFGFVNFEKHEEAQKAVMDM 251
Query: 115 NGRHLFGQPIKVNWAYASGQREDTSGH---------------FNIFVGDLSPEVTDATLF 159
NG + G+ + V A G+R++ N++V +L + D L
Sbjct: 252 NGMQVSGRLLYVGRAQKRGERQNELKRRFEHTKQDRLNRCQGVNLYVKNLDDSIDDEKLR 311
Query: 160 ACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT 219
FS Y + A+VM + G S+GFGFV F + ++A A+ ++ G+ +G++ + A
Sbjct: 312 KEFSPYGVITSAKVMTE--GGHSKGFGFVCFSSPEEATKAVTEMNGRIIGTKPLYVALAQ 369
Query: 220 K 220
+
Sbjct: 370 R 370
>gi|320167378|gb|EFW44277.1| poly A binding protein [Capsaspora owczarzaki ATCC 30864]
Length = 662
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 79/282 (28%), Positives = 127/282 (45%), Gaps = 36/282 (12%)
Query: 52 DPSTCRS----VYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRR 105
DP+ +S V++ N+ + L + FS+ G + CK++ + S YGF+HY +
Sbjct: 124 DPAVRKSGLGNVFIKNLDKTIDNKALLDTFSAFGNILSCKVVTDENGSKGYGFVHYETQE 183
Query: 106 SAAMAILSLNGRHLFGQPIKVNWAYASGQR----EDTSGHFNIFVGDLSPEVTDATLFAC 161
+A AI +NG + G+ + V +R E + N+FV +L + TDA L
Sbjct: 184 AAETAIAKVNGMVINGKQVFVGIFVPRKERVELGEGVTKFTNVFVKNLPEDTTDAALNDM 243
Query: 162 FSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKG 221
FS + + +M +S+GFGFV + +DAQ+A+N L G L + + A K
Sbjct: 244 FSKFGKITSVVIMKSSDDDKSKGFGFVCYEKVEDAQAAVNALNGTELAGKTLFVARAQKK 303
Query: 222 AGNN-EDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLH 280
A E KQ DA + + N Q +YV NL + + +
Sbjct: 304 AEREAELKQRYDALRLERI------------------NKYQGINLYVKNLDDAIDEDKIR 345
Query: 281 RHFHSLGAGVIEEVRVQRD-----KGFGFVRYSTHAEAALAI 317
F G I V++ RD +GFGF+ +S+ EA A+
Sbjct: 346 TEFAPF--GTITSVKIMRDEKGKSRGFGFICFSSAEEATKAV 385
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 132/294 (44%), Gaps = 48/294 (16%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIR----KDKSSYGFIHYFDRRSAAMAILS 113
S+YVG++H +VTE L E+F++ GPV ++ R + Y ++++ A A+ +
Sbjct: 46 SLYVGDLHPEVTEAQLFEIFNNIGPVVSIRVCRDAITRRSLGYAYVNFHAAVDAERALDT 105
Query: 114 LNGRHLFGQPIKVNWAYASGQRE---DTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSD 170
LN + G+P ++ W+ QR+ SG N+F+ +L + + L FS + +
Sbjct: 106 LNYSLIRGKPCRIMWS----QRDPAVRKSGLGNVFIKNLDKTIDNKALLDTFSAFGNILS 161
Query: 171 ARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQS 230
+V+ D+ S+G+GFV + Q+ A++AI + G + +Q+
Sbjct: 162 CKVVTDENG--SKGYGFVHYETQEAAETAIAKVNGMVINGKQVFVGIFVP---------- 209
Query: 231 SDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLG--- 287
K VEL G + ++T V+V NL + T L+ F G
Sbjct: 210 --RKERVELGEGVT----------------KFTNVFVKNLPEDTTDAALNDMFSKFGKIT 251
Query: 288 -AGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSK 340
+++ + KGFGFV Y +A A+ N T+ L GK + + K
Sbjct: 252 SVVIMKSSDDDKSKGFGFVCYEKVEDAQAAVNALNGTE---LAGKTLFVARAQK 302
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 84/170 (49%), Gaps = 20/170 (11%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRK---DKSS-YGFIHYFDRRSAAMAILS 113
+V+V N+ T+ L ++FS G + +++ DKS +GF+ Y A A+ +
Sbjct: 225 NVFVKNLPEDTTDAALNDMFSKFGKITSVVIMKSSDDDKSKGFGFVCYEKVEDAQAAVNA 284
Query: 114 LNGRHLFGQPIKVNWAYASGQRE---------------DTSGHFNIFVGDLSPEVTDATL 158
LNG L G+ + V A +RE + N++V +L + + +
Sbjct: 285 LNGTELAGKTLFVARAQKKAEREAELKQRYDALRLERINKYQGINLYVKNLDDAIDEDKI 344
Query: 159 FACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWL 208
F+ + + + ++M D+K G+SRGFGF+ F + ++A A+ ++ G+ +
Sbjct: 345 RTEFAPFGTITSVKIMRDEK-GKSRGFGFICFSSAEEATKAVTEMNGQTI 393
Score = 39.7 bits (91), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 45/91 (49%), Gaps = 6/91 (6%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS---YGFIHYFDRRSAAMAILSL 114
++YV N+ + E ++ F+ G + K++R +K +GFI + A A+ +
Sbjct: 329 NLYVKNLDDAIDEDKIRTEFAPFGTITSVKIMRDEKGKSRGFGFICFSSAEEATKAVTEM 388
Query: 115 NGRHL--FGQPIKVNWA-YASGQREDTSGHF 142
NG+ + F +P+ V A A +R + HF
Sbjct: 389 NGQTIQGFPKPLYVALAQRAEDRRAQLAAHF 419
>gi|149023880|gb|EDL80377.1| rCG31475, isoform CRA_c [Rattus norvegicus]
Length = 630
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 131/281 (46%), Gaps = 47/281 (16%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIR----KDKSSYGFIHYFDRRSAAMAILS 113
S+YVG++H+ VTE +L E FS GPV ++ R + Y ++++ A A+ +
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 114 LNGRHLFGQPIKVNWAYASGQREDT---SGHFNIFVGDLSPEVTDATLFACFSVYPSCSD 170
+N + G+PI++ W+ QR+ + SG N+F+ +L + + L+ FS + +
Sbjct: 72 MNFDVIKGKPIRIMWS----QRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 171 ARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQS 230
+V+ D+ S+G+ FV F Q+ A AI + G L R++ G + ++
Sbjct: 128 CKVVCDENG--SKGYAFVHFETQEAANKAIEKMNGMLLNDRKVFV-------GRFKSRKE 178
Query: 231 SDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGV 290
+A EL + E +T VY+ N EV +L F G +
Sbjct: 179 REA----ELGAKAKE----------------FTNVYIKNFGEEVDDENLRELFSQFGKTL 218
Query: 291 IEEVRVQRD-----KGFGFVRYSTHAEAALAIQMGNTTQSS 326
V+V RD KGFGFV Y H +A A++ N + S
Sbjct: 219 --SVKVMRDCSGKSKGFGFVSYEKHEDANKAVEEMNGKEMS 257
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 128/279 (45%), Gaps = 31/279 (11%)
Query: 52 DPSTCRS----VYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRR 105
DPS +S V++ N+ + L + FS+ G + CK++ + S Y F+H+ +
Sbjct: 90 DPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQE 149
Query: 106 SAAMAILSLNGRHLFGQPIKVNWAYASGQREDTSG-----HFNIFVGDLSPEVTDATLFA 160
+A AI +NG L + + V + +RE G N+++ + EV D L
Sbjct: 150 AANKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDENLRE 209
Query: 161 CFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATK 220
FS + +VM D +G+S+GFGFVS+ +DA A+ ++ GK + + I A K
Sbjct: 210 LFSQFGKTLSVKVMRDC-SGKSKGFGFVSYEKHEDANKAVEEMNGKEMSGKSIFVGRAQK 268
Query: 221 GAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLH 280
++Q+ EL + +E + Q +Y+ NL + L
Sbjct: 269 KV----ERQA-------ELKRKFEQLKQERISRY------QGVNLYIKNLDDTIDDEKLR 311
Query: 281 RHFHSLGAGVIEEVRVQ--RDKGFGFVRYSTHAEAALAI 317
+ F G+ +V ++ R KGFGFV +S+ EA A+
Sbjct: 312 KEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAV 350
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 88/181 (48%), Gaps = 20/181 (11%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRK---DKSSYGFIHYFDRRSAAMAILSL 114
+VY+ N +V + L+E+FS G K++R +GF+ Y A A+ +
Sbjct: 192 NVYIKNFGEEVDDENLRELFSQFGKTLSVKVMRDCSGKSKGFGFVSYEKHEDANKAVEEM 251
Query: 115 NGRHLFGQPIKVNWAYASGQR-------------EDTSGH--FNIFVGDLSPEVTDATLF 159
NG+ + G+ I V A +R E S + N+++ +L + D L
Sbjct: 252 NGKEMSGKSIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLR 311
Query: 160 ACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT 219
FS + S + A+VM + GRS+GFGFV F + ++A A+ ++ G+ +GS+ + A
Sbjct: 312 KEFSPFGSITSAKVMLED--GRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQ 369
Query: 220 K 220
+
Sbjct: 370 R 370
Score = 38.9 bits (89), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRRSAAMAILSLN 115
++Y+ N+ + + L++ FS G + K++ +D S +GF+ + A A+ +N
Sbjct: 295 NLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMN 354
Query: 116 GRHLFGQPIKVNWAYASGQRE 136
GR + +P+ V A +R+
Sbjct: 355 GRIVGSKPLYVALAQRKEERK 375
>gi|22507391|ref|NP_683717.1| polyadenylate-binding protein 4 isoform 2 [Mus musculus]
gi|16307591|gb|AAH10345.1| Poly(A) binding protein, cytoplasmic 4 [Mus musculus]
Length = 615
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 131/281 (46%), Gaps = 47/281 (16%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIR----KDKSSYGFIHYFDRRSAAMAILS 113
S+YVG++H+ VTE +L E FS GPV ++ R + Y ++++ A A+ +
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 114 LNGRHLFGQPIKVNWAYASGQREDT---SGHFNIFVGDLSPEVTDATLFACFSVYPSCSD 170
+N + G+PI++ W+ QR+ + SG N+F+ +L + + L+ FS + +
Sbjct: 72 MNFDVMKGKPIRIMWS----QRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 171 ARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQS 230
+V+ D+ S+G+ FV F Q+ A AI + G L R++ G + ++
Sbjct: 128 CKVVCDENG--SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFV-------GRFKSRKE 178
Query: 231 SDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGV 290
+A EL + E +T VY+ N EV +L F G +
Sbjct: 179 REA----ELGAKAKE----------------FTNVYIKNFGEEVDDGNLKELFSQFGKTL 218
Query: 291 IEEVRVQRD-----KGFGFVRYSTHAEAALAIQMGNTTQSS 326
V+V RD KGFGFV Y H +A A++ N + S
Sbjct: 219 --SVKVMRDSSGKSKGFGFVSYEKHEDANKAVEEMNGKEMS 257
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 129/283 (45%), Gaps = 31/283 (10%)
Query: 52 DPSTCRS----VYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRR 105
DPS +S V++ N+ + L + FS+ G + CK++ + S Y F+H+ +
Sbjct: 90 DPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQE 149
Query: 106 SAAMAILSLNGRHLFGQPIKVNWAYASGQREDTSG-----HFNIFVGDLSPEVTDATLFA 160
+A AI +NG L + + V + +RE G N+++ + EV D L
Sbjct: 150 AADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDGNLKE 209
Query: 161 CFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATK 220
FS + +VM D +G+S+GFGFVS+ +DA A+ ++ GK + + I A K
Sbjct: 210 LFSQFGKTLSVKVMRDS-SGKSKGFGFVSYEKHEDANKAVEEMNGKEMSGKAIFVGRAQK 268
Query: 221 GAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLH 280
++Q+ EL + +E + Q +Y+ NL + L
Sbjct: 269 KV----ERQA-------ELKRKFEQLKQERISRY------QGVNLYIKNLDDTIDDEKLR 311
Query: 281 RHFHSLGAGVIEEVRVQ--RDKGFGFVRYSTHAEAALAIQMGN 321
R F G+ +V ++ R KGFGFV +S+ EA A+ N
Sbjct: 312 REFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMN 354
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 88/181 (48%), Gaps = 20/181 (11%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRK---DKSSYGFIHYFDRRSAAMAILSL 114
+VY+ N +V + L+E+FS G K++R +GF+ Y A A+ +
Sbjct: 192 NVYIKNFGEEVDDGNLKELFSQFGKTLSVKVMRDSSGKSKGFGFVSYEKHEDANKAVEEM 251
Query: 115 NGRHLFGQPIKVNWAYASGQR-------------EDTSGH--FNIFVGDLSPEVTDATLF 159
NG+ + G+ I V A +R E S + N+++ +L + D L
Sbjct: 252 NGKEMSGKAIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLR 311
Query: 160 ACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT 219
FS + S + A+VM + GRS+GFGFV F + ++A A+ ++ G+ +GS+ + A
Sbjct: 312 REFSPFGSITSAKVMLED--GRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQ 369
Query: 220 K 220
+
Sbjct: 370 R 370
>gi|168024568|ref|XP_001764808.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684102|gb|EDQ70507.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 414
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 62/169 (36%), Positives = 97/169 (57%), Gaps = 9/169 (5%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS-----YGFIHYFDRRSAAMAIL 112
+ YVGN+ +QV+E LL E+F GPV + KD+ + YGFI + A AI
Sbjct: 26 TAYVGNLDSQVSEELLWELFVQAGPVVNV-YVPKDRVTNLHQGYGFIEFRSEDDADYAIK 84
Query: 113 SLNGRHLFGQPIKVNWAYASGQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPS-CSDA 171
LN L+G+PI+VN A + D N+FVG+L P+V + L+ FS + ++
Sbjct: 85 ILNMIKLYGKPIRVNKASQDKKSLDVGA--NLFVGNLDPDVDEKLLYDTFSAFGVIVTNP 142
Query: 172 RVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATK 220
++M D +G SRGFGF+S+ + + + SAI + G++L +R I ++A K
Sbjct: 143 KIMRDPDSGNSRGFGFISYDSFEASDSAIEAMNGQYLCNRAITVSYAYK 191
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 99/231 (42%), Gaps = 55/231 (23%)
Query: 116 GRHLFGQPIKVNWAYASGQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMW 175
G +L GQ +A+ + +D + +VG+L +V++ L+ F + V
Sbjct: 10 GANLLGQ-------HAAERNQDATA----YVGNLDSQVSEELLWELFVQAGPVVNVYVPK 58
Query: 176 DQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSSDAKS 235
D+ T +G+GF+ FR++ DA AI L L + IR N A+ +DK+S D +
Sbjct: 59 DRVTNLHQGYGFIEFRSEDDADYAIKILNMIKLYGKPIRVNKAS------QDKKSLDVGA 112
Query: 236 VVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVR 295
++VGNL P+V + L+ F + G ++ +
Sbjct: 113 ----------------------------NLFVGNLDPDVDEKLLYDTFSAFGV-IVTNPK 143
Query: 296 VQRD------KGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSK 340
+ RD +GFGF+ Y + + AI+ N YL + + S+ K
Sbjct: 144 IMRDPDSGNSRGFGFISYDSFEASDSAIEAMN---GQYLCNRAITVSYAYK 191
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 49/88 (55%), Gaps = 9/88 (10%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS-----YGFIHYFDRRSAAMAIL 112
+++VGN+ V E LL + FS+ G + I +D S +GFI Y ++ AI
Sbjct: 113 NLFVGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDSGNSRGFGFISYDSFEASDSAIE 172
Query: 113 SLNGRHLFGQPIKVNWAYASGQREDTSG 140
++NG++L + I V++AY ++DT G
Sbjct: 173 AMNGQYLCNRAITVSYAY----KKDTKG 196
>gi|348552996|ref|XP_003462313.1| PREDICTED: polyadenylate-binding protein 4-like isoform 2 [Cavia
porcellus]
Length = 644
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 129/276 (46%), Gaps = 47/276 (17%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIR----KDKSSYGFIHYFDRRSAAMAILS 113
S+YVG++H+ VTE +L E FS GPV ++ R + Y ++++ A A+ +
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 114 LNGRHLFGQPIKVNWAYASGQREDT---SGHFNIFVGDLSPEVTDATLFACFSVYPSCSD 170
+N + G+PI++ W+ QR+ + SG N+F+ +L + + L+ FS + +
Sbjct: 72 MNFDVIKGKPIRIMWS----QRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 171 ARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQS 230
+V+ D+ S+G+ FV F Q+ A AI + G L R++ G + ++
Sbjct: 128 CKVVCDENG--SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFV-------GRFKSRKE 178
Query: 231 SDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGV 290
+A EL + E +T VY+ N EV +L F G +
Sbjct: 179 REA----ELGAKAKE----------------FTNVYIKNFGEEVDDENLKELFSQFGKTL 218
Query: 291 IEEVRVQRD-----KGFGFVRYSTHAEAALAIQMGN 321
V+V RD KGFGFV Y H +A A++ N
Sbjct: 219 --SVKVMRDPSGKSKGFGFVSYEKHEDANKAVEEMN 252
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 129/283 (45%), Gaps = 31/283 (10%)
Query: 52 DPSTCRS----VYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRR 105
DPS +S V++ N+ + L + FS+ G + CK++ + S Y F+H+ +
Sbjct: 90 DPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQE 149
Query: 106 SAAMAILSLNGRHLFGQPIKVNWAYASGQREDTSG-----HFNIFVGDLSPEVTDATLFA 160
+A AI +NG L + + V + +RE G N+++ + EV D L
Sbjct: 150 AADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDENLKE 209
Query: 161 CFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATK 220
FS + +VM D +G+S+GFGFVS+ +DA A+ ++ GK + + I A K
Sbjct: 210 LFSQFGKTLSVKVMRD-PSGKSKGFGFVSYEKHEDANKAVEEMNGKEINGKIIFVGRAQK 268
Query: 221 GAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLH 280
++Q+ EL + +E + Q +Y+ NL + L
Sbjct: 269 KV----ERQA-------ELKRKFEQLKQERISRY------QGVNLYIKNLDDTIDDEKLR 311
Query: 281 RHFHSLGAGVIEEVRVQ--RDKGFGFVRYSTHAEAALAIQMGN 321
+ F G+ +V ++ R KGFGFV +S+ EA A+ N
Sbjct: 312 KEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMN 354
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 88/181 (48%), Gaps = 20/181 (11%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRK---DKSSYGFIHYFDRRSAAMAILSL 114
+VY+ N +V + L+E+FS G K++R +GF+ Y A A+ +
Sbjct: 192 NVYIKNFGEEVDDENLKELFSQFGKTLSVKVMRDPSGKSKGFGFVSYEKHEDANKAVEEM 251
Query: 115 NGRHLFGQPIKVNWAYASGQR-------------EDTSGH--FNIFVGDLSPEVTDATLF 159
NG+ + G+ I V A +R E S + N+++ +L + D L
Sbjct: 252 NGKEINGKIIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLR 311
Query: 160 ACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT 219
FS + S + A+VM + GRS+GFGFV F + ++A A+ ++ G+ +GS+ + A
Sbjct: 312 KEFSPFGSITSAKVMLED--GRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQ 369
Query: 220 K 220
+
Sbjct: 370 R 370
Score = 38.9 bits (89), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRRSAAMAILSLN 115
++Y+ N+ + + L++ FS G + K++ +D S +GF+ + A A+ +N
Sbjct: 295 NLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMN 354
Query: 116 GRHLFGQPIKVNWAYASGQRE 136
GR + +P+ V A +R+
Sbjct: 355 GRIVGSKPLYVALAQRKEERK 375
>gi|148698436|gb|EDL30383.1| mCG5546, isoform CRA_b [Mus musculus]
Length = 580
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 131/281 (46%), Gaps = 47/281 (16%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIR----KDKSSYGFIHYFDRRSAAMAILS 113
S+YVG++H+ VTE +L E FS GPV ++ R + Y ++++ A A+ +
Sbjct: 29 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 88
Query: 114 LNGRHLFGQPIKVNWAYASGQREDT---SGHFNIFVGDLSPEVTDATLFACFSVYPSCSD 170
+N + G+PI++ W+ QR+ + SG N+F+ +L + + L+ FS + +
Sbjct: 89 MNFDVMKGKPIRIMWS----QRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILS 144
Query: 171 ARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQS 230
+V+ D+ S+G+ FV F Q+ A AI + G L R++ G + ++
Sbjct: 145 CKVVCDENG--SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFV-------GRFKSRKE 195
Query: 231 SDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGV 290
+A EL + E +T VY+ N EV +L F G +
Sbjct: 196 REA----ELGAKAKE----------------FTNVYIKNFGEEVDDGNLKELFSQFGKTL 235
Query: 291 IEEVRVQRD-----KGFGFVRYSTHAEAALAIQMGNTTQSS 326
V+V RD KGFGFV Y H +A A++ N + S
Sbjct: 236 --SVKVMRDSSGKSKGFGFVSYEKHEDANKAVEEMNGKEMS 274
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/279 (27%), Positives = 128/279 (45%), Gaps = 31/279 (11%)
Query: 52 DPSTCRS----VYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRR 105
DPS +S V++ N+ + L + FS+ G + CK++ + S Y F+H+ +
Sbjct: 107 DPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQE 166
Query: 106 SAAMAILSLNGRHLFGQPIKVNWAYASGQREDTSG-----HFNIFVGDLSPEVTDATLFA 160
+A AI +NG L + + V + +RE G N+++ + EV D L
Sbjct: 167 AADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDGNLKE 226
Query: 161 CFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATK 220
FS + +VM D +G+S+GFGFVS+ +DA A+ ++ GK + + I A K
Sbjct: 227 LFSQFGKTLSVKVMRDS-SGKSKGFGFVSYEKHEDANKAVEEMNGKEMSGKAIFVGRAQK 285
Query: 221 GAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLH 280
++Q+ EL + +E + Q +Y+ NL + L
Sbjct: 286 KV----ERQA-------ELKRKFEQLKQERISRY------QGVNLYIKNLDDTIDDEKLR 328
Query: 281 RHFHSLGAGVIEEVRVQ--RDKGFGFVRYSTHAEAALAI 317
R F G+ +V ++ R KGFGFV +S+ EA A+
Sbjct: 329 REFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAV 367
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 88/181 (48%), Gaps = 20/181 (11%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRK---DKSSYGFIHYFDRRSAAMAILSL 114
+VY+ N +V + L+E+FS G K++R +GF+ Y A A+ +
Sbjct: 209 NVYIKNFGEEVDDGNLKELFSQFGKTLSVKVMRDSSGKSKGFGFVSYEKHEDANKAVEEM 268
Query: 115 NGRHLFGQPIKVNWAYASGQR-------------EDTSGH--FNIFVGDLSPEVTDATLF 159
NG+ + G+ I V A +R E S + N+++ +L + D L
Sbjct: 269 NGKEMSGKAIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLR 328
Query: 160 ACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT 219
FS + S + A+VM + GRS+GFGFV F + ++A A+ ++ G+ +GS+ + A
Sbjct: 329 REFSPFGSITSAKVMLED--GRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQ 386
Query: 220 K 220
+
Sbjct: 387 R 387
>gi|297707183|ref|XP_002830392.1| PREDICTED: poly(A) binding protein, cytoplasmic 1-like [Pongo
abelii]
Length = 614
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 83/279 (29%), Positives = 130/279 (46%), Gaps = 43/279 (15%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIR----KDKSSYGFIHYFDRRSAAMAILS 113
S+YVG++H VTE +L E FS GP+ ++ R + Y +I++ A A+ +
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADAERALDT 71
Query: 114 LNGRHLFGQPIKVNWAYAS-GQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDAR 172
+N L GQPI++ W+ G R+ SG NIF+ +L + + L+ FS + + +
Sbjct: 72 MNFEMLKGQPIRIMWSQRDPGLRK--SGVGNIFIKNLEDSIDNKALYDTFSTFGNILSCK 129
Query: 173 VMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSSD 232
V D+ SRGFGFV F + AQ AIN + G L R++ G+ + ++ +
Sbjct: 130 VACDEHG--SRGFGFVHFETHEAAQQAINTMNGMLLNDRKV-------FVGHFKSRRERE 180
Query: 233 AKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIE 292
A EL + E +T +YV NL +V + L F G +
Sbjct: 181 A----ELGARALE----------------FTNIYVKNLPVDVDEQGLQDLFSQFGKML-- 218
Query: 293 EVRVQRD-----KGFGFVRYSTHAEAALAIQMGNTTQSS 326
V+V RD + FGFV + H EA A+ N + S
Sbjct: 219 SVKVMRDNSGHSRCFGFVNFEKHEEAQKAVVHMNGKEVS 257
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 77/285 (27%), Positives = 122/285 (42%), Gaps = 33/285 (11%)
Query: 49 PGFDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRRS 106
PG S ++++ N+ + L + FS+ G + CK+ + S +GF+H+ +
Sbjct: 91 PGLRKSGVGNIFIKNLEDSIDNKALYDTFSTFGNILSCKVACDEHGSRGFGFVHFETHEA 150
Query: 107 AAMAILSLNGRHLFGQPIKVNWAYASGQREDTSG-----HFNIFVGDLSPEVTDATLFAC 161
A AI ++NG L + + V + +RE G NI+V +L +V + L
Sbjct: 151 AQQAINTMNGMLLNDRKVFVGHFKSRREREAELGARALEFTNIYVKNLPVDVDEQGLQDL 210
Query: 162 FSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKG 221
FS + +VM D +G SR FGFV+F ++AQ A+ + GK + R + A K
Sbjct: 211 FSQFGKMLSVKVMRD-NSGHSRCFGFVNFEKHEEAQKAVVHMNGKEVSGRLLYAGRAQKR 269
Query: 222 AGN-NEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLH 280
NE K+ + L Q +YV NL + L
Sbjct: 270 VERQNELKRRFEQMKQDRL------------------RRYQGVNLYVKNLDDSIDDDKLR 311
Query: 281 RHFHSLGAGVIEEVRVQRD----KGFGFVRYSTHAEAALAIQMGN 321
+ F GVI +V + KGFGFV +S+ EA A+ N
Sbjct: 312 KEFSPY--GVITSAKVMTEGGHSKGFGFVCFSSPEEATKAVTEMN 354
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 88/181 (48%), Gaps = 20/181 (11%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDK---SSYGFIHYFDRRSAAMAILSL 114
++YV N+ V E LQ++FS G + K++R + +GF+++ A A++ +
Sbjct: 192 NIYVKNLPVDVDEQGLQDLFSQFGKMLSVKVMRDNSGHSRCFGFVNFEKHEEAQKAVVHM 251
Query: 115 NGRHLFGQPIKVNWAYASGQREDTSGH---------------FNIFVGDLSPEVTDATLF 159
NG+ + G+ + A +R++ N++V +L + D L
Sbjct: 252 NGKEVSGRLLYAGRAQKRVERQNELKRRFEQMKQDRLRRYQGVNLYVKNLDDSIDDDKLR 311
Query: 160 ACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT 219
FS Y + A+VM + G S+GFGFV F + ++A A+ ++ G+ +G++ + A
Sbjct: 312 KEFSPYGVITSAKVMTE--GGHSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQ 369
Query: 220 K 220
+
Sbjct: 370 R 370
>gi|348552998|ref|XP_003462314.1| PREDICTED: polyadenylate-binding protein 4-like isoform 3 [Cavia
porcellus]
Length = 615
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 129/276 (46%), Gaps = 47/276 (17%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIR----KDKSSYGFIHYFDRRSAAMAILS 113
S+YVG++H+ VTE +L E FS GPV ++ R + Y ++++ A A+ +
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 114 LNGRHLFGQPIKVNWAYASGQREDT---SGHFNIFVGDLSPEVTDATLFACFSVYPSCSD 170
+N + G+PI++ W+ QR+ + SG N+F+ +L + + L+ FS + +
Sbjct: 72 MNFDVIKGKPIRIMWS----QRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 171 ARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQS 230
+V+ D+ S+G+ FV F Q+ A AI + G L R++ G + ++
Sbjct: 128 CKVVCDENG--SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFV-------GRFKSRKE 178
Query: 231 SDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGV 290
+A EL + E +T VY+ N EV +L F G +
Sbjct: 179 REA----ELGAKAKE----------------FTNVYIKNFGEEVDDENLKELFSQFGKTL 218
Query: 291 IEEVRVQRD-----KGFGFVRYSTHAEAALAIQMGN 321
V+V RD KGFGFV Y H +A A++ N
Sbjct: 219 --SVKVMRDPSGKSKGFGFVSYEKHEDANKAVEEMN 252
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 129/283 (45%), Gaps = 31/283 (10%)
Query: 52 DPSTCRS----VYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRR 105
DPS +S V++ N+ + L + FS+ G + CK++ + S Y F+H+ +
Sbjct: 90 DPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQE 149
Query: 106 SAAMAILSLNGRHLFGQPIKVNWAYASGQREDTSG-----HFNIFVGDLSPEVTDATLFA 160
+A AI +NG L + + V + +RE G N+++ + EV D L
Sbjct: 150 AADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDENLKE 209
Query: 161 CFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATK 220
FS + +VM D +G+S+GFGFVS+ +DA A+ ++ GK + + I A K
Sbjct: 210 LFSQFGKTLSVKVMRD-PSGKSKGFGFVSYEKHEDANKAVEEMNGKEINGKIIFVGRAQK 268
Query: 221 GAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLH 280
++Q+ EL + +E + Q +Y+ NL + L
Sbjct: 269 KV----ERQA-------ELKRKFEQLKQERISRY------QGVNLYIKNLDDTIDDEKLR 311
Query: 281 RHFHSLGAGVIEEVRVQ--RDKGFGFVRYSTHAEAALAIQMGN 321
+ F G+ +V ++ R KGFGFV +S+ EA A+ N
Sbjct: 312 KEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMN 354
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 88/181 (48%), Gaps = 20/181 (11%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRK---DKSSYGFIHYFDRRSAAMAILSL 114
+VY+ N +V + L+E+FS G K++R +GF+ Y A A+ +
Sbjct: 192 NVYIKNFGEEVDDENLKELFSQFGKTLSVKVMRDPSGKSKGFGFVSYEKHEDANKAVEEM 251
Query: 115 NGRHLFGQPIKVNWAYASGQR-------------EDTSGH--FNIFVGDLSPEVTDATLF 159
NG+ + G+ I V A +R E S + N+++ +L + D L
Sbjct: 252 NGKEINGKIIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLR 311
Query: 160 ACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT 219
FS + S + A+VM + GRS+GFGFV F + ++A A+ ++ G+ +GS+ + A
Sbjct: 312 KEFSPFGSITSAKVMLED--GRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQ 369
Query: 220 K 220
+
Sbjct: 370 R 370
Score = 38.5 bits (88), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRRSAAMAILSLN 115
++Y+ N+ + + L++ FS G + K++ +D S +GF+ + A A+ +N
Sbjct: 295 NLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMN 354
Query: 116 GRHLFGQPIKVNWAYASGQRE 136
GR + +P+ V A +R+
Sbjct: 355 GRIVGSKPLYVALAQRKEERK 375
>gi|139948570|ref|NP_001077193.1| polyadenylate-binding protein 4 [Bos taurus]
gi|134024563|gb|AAI34510.1| PABPC4 protein [Bos taurus]
gi|296488909|tpg|DAA31022.1| TPA: poly A binding protein, cytoplasmic 4 [Bos taurus]
Length = 645
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 129/276 (46%), Gaps = 47/276 (17%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIR----KDKSSYGFIHYFDRRSAAMAILS 113
S+YVG++H+ VTE +L E FS GPV ++ R + Y ++++ A A+ +
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 114 LNGRHLFGQPIKVNWAYASGQREDT---SGHFNIFVGDLSPEVTDATLFACFSVYPSCSD 170
+N + G+PI++ W+ QR+ + SG N+F+ +L + + L+ FS + +
Sbjct: 72 MNFDVIKGKPIRIMWS----QRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 171 ARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQS 230
+V+ D+ S+G+ FV F Q+ A AI + G L R++ G + ++
Sbjct: 128 CKVVCDENG--SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFV-------GRFKSRKE 178
Query: 231 SDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGV 290
+A EL + E +T VY+ N EV +L F G +
Sbjct: 179 REA----ELGAKAKE----------------FTNVYIKNFGEEVDDENLKELFSQFGKTL 218
Query: 291 IEEVRVQRD-----KGFGFVRYSTHAEAALAIQMGN 321
V+V RD KGFGFV Y H +A A++ N
Sbjct: 219 --SVKVMRDPSGKSKGFGFVSYEKHEDANKAVEEMN 252
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 129/283 (45%), Gaps = 31/283 (10%)
Query: 52 DPSTCRS----VYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRR 105
DPS +S V++ N+ + L + FS+ G + CK++ + S Y F+H+ +
Sbjct: 90 DPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQE 149
Query: 106 SAAMAILSLNGRHLFGQPIKVNWAYASGQREDTSG-----HFNIFVGDLSPEVTDATLFA 160
+A AI +NG L + + V + +RE G N+++ + EV D L
Sbjct: 150 AADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDENLKE 209
Query: 161 CFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATK 220
FS + +VM D +G+S+GFGFVS+ +DA A+ ++ GK + + I A K
Sbjct: 210 LFSQFGKTLSVKVMRD-PSGKSKGFGFVSYEKHEDANKAVEEMNGKEITGKVIFVGRAQK 268
Query: 221 GAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLH 280
++Q+ EL + +E + Q +Y+ NL + L
Sbjct: 269 KV----ERQA-------ELKRKFEQLKQERISRY------QGVNLYIKNLDDTIDDEKLR 311
Query: 281 RHFHSLGAGVIEEVRVQ--RDKGFGFVRYSTHAEAALAIQMGN 321
+ F G+ +V ++ R KGFGFV +S+ EA A+ N
Sbjct: 312 KEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMN 354
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 88/181 (48%), Gaps = 20/181 (11%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRK---DKSSYGFIHYFDRRSAAMAILSL 114
+VY+ N +V + L+E+FS G K++R +GF+ Y A A+ +
Sbjct: 192 NVYIKNFGEEVDDENLKELFSQFGKTLSVKVMRDPSGKSKGFGFVSYEKHEDANKAVEEM 251
Query: 115 NGRHLFGQPIKVNWAYASGQR-------------EDTSGH--FNIFVGDLSPEVTDATLF 159
NG+ + G+ I V A +R E S + N+++ +L + D L
Sbjct: 252 NGKEITGKVIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLR 311
Query: 160 ACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT 219
FS + S + A+VM + GRS+GFGFV F + ++A A+ ++ G+ +GS+ + A
Sbjct: 312 KEFSPFGSITSAKVMLED--GRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQ 369
Query: 220 K 220
+
Sbjct: 370 R 370
Score = 38.9 bits (89), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRRSAAMAILSLN 115
++Y+ N+ + + L++ FS G + K++ +D S +GF+ + A A+ +N
Sbjct: 295 NLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMN 354
Query: 116 GRHLFGQPIKVNWAYASGQRE 136
GR + +P+ V A +R+
Sbjct: 355 GRIVGSKPLYVALAQRKEERK 375
>gi|417397890|gb|JAA45978.1| Putative apoptosis-promoting rna-binding protein tia-1/tiar rrm
superfamily [Desmodus rotundus]
Length = 253
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/171 (39%), Positives = 96/171 (56%), Gaps = 18/171 (10%)
Query: 170 DARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQ 229
DARV+ D TG+S+G+GFVSF N+ DA++AI + G+WLG RQIR NWAT+ + Q
Sbjct: 2 DARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQ 61
Query: 230 SSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAG 289
++ K + ++ N +P+N TVY G +A +T + + F G
Sbjct: 62 ENNTKQL---------RFEDVVNQSSPKN----CTVYCGGIASGLTDQLMRQTFSPFGQ- 107
Query: 290 VIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSK 340
I E+RV +KG+ FVR+STH AA AI N T + G +KC WG +
Sbjct: 108 -IMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTT---IEGHVVKCYWGKE 154
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/156 (22%), Positives = 65/156 (41%), Gaps = 25/156 (16%)
Query: 96 YGFIHYFDRRSAAMAILSLNGRHLFGQPIKVNWAY------ASGQREDTS---------- 139
YGF+ ++++ A AI+ + G+ L G+ I+ NWA S Q +T
Sbjct: 17 YGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQ 76
Query: 140 ---GHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDA 196
+ ++ G ++ +TD + FS + + RV +G+ FV F + A
Sbjct: 77 SSPKNCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVF------PEKGYSFVRFSTHESA 130
Query: 197 QSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSSD 232
AI + G + ++C W + ++ Q D
Sbjct: 131 AHAIVSVNGTTIEGHVVKCYWGKESPDMTKNFQQVD 166
Score = 45.8 bits (107), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 42/80 (52%), Gaps = 3/80 (3%)
Query: 53 PSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSSYGFIHYFDRRSAAMAIL 112
P C +VY G I + +T+ L+++ FS G + ++ + Y F+ + SAA AI+
Sbjct: 79 PKNC-TVYCGGIASGLTDQLMRQTFSPFGQIMEIRVF--PEKGYSFVRFSTHESAAHAIV 135
Query: 113 SLNGRHLFGQPIKVNWAYAS 132
S+NG + G +K W S
Sbjct: 136 SVNGTTIEGHVVKCYWGKES 155
>gi|71297004|gb|AAH30025.1| TIAL1 protein [Homo sapiens]
Length = 252
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/171 (39%), Positives = 96/171 (56%), Gaps = 18/171 (10%)
Query: 170 DARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQ 229
DARV+ D TG+S+G+GFVSF N+ DA++AI + G+WLG RQIR NWAT+ + Q
Sbjct: 2 DARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQ 61
Query: 230 SSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAG 289
++ K + ++ N +P+N TVY G +A +T + + F G
Sbjct: 62 ENNTKQL---------RFEDVVNQSSPKN----CTVYCGGIASGLTDQLMRQTFSPFGQ- 107
Query: 290 VIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSK 340
I E+RV +KG+ FVR+STH AA AI N T + G +KC WG +
Sbjct: 108 -IMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTT---IEGHVVKCYWGKE 154
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/156 (22%), Positives = 65/156 (41%), Gaps = 25/156 (16%)
Query: 96 YGFIHYFDRRSAAMAILSLNGRHLFGQPIKVNWAY------ASGQREDTS---------- 139
YGF+ ++++ A AI+ + G+ L G+ I+ NWA S Q +T
Sbjct: 17 YGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQ 76
Query: 140 ---GHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDA 196
+ ++ G ++ +TD + FS + + RV +G+ FV F + A
Sbjct: 77 SSPKNCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVF------PEKGYSFVRFSTHESA 130
Query: 197 QSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSSD 232
AI + G + ++C W + ++ Q D
Sbjct: 131 AHAIVSVNGTTIEGHVVKCYWGKESPDMTKNFQQVD 166
Score = 45.8 bits (107), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 42/80 (52%), Gaps = 3/80 (3%)
Query: 53 PSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSSYGFIHYFDRRSAAMAIL 112
P C +VY G I + +T+ L+++ FS G + ++ + Y F+ + SAA AI+
Sbjct: 79 PKNC-TVYCGGIASGLTDQLMRQTFSPFGQIMEIRVF--PEKGYSFVRFSTHESAAHAIV 135
Query: 113 SLNGRHLFGQPIKVNWAYAS 132
S+NG + G +K W S
Sbjct: 136 SVNGTTIEGHVVKCYWGKES 155
>gi|426215230|ref|XP_004001877.1| PREDICTED: polyadenylate-binding protein 4 isoform 3 [Ovis aries]
Length = 631
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 129/276 (46%), Gaps = 47/276 (17%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIR----KDKSSYGFIHYFDRRSAAMAILS 113
S+YVG++H+ VTE +L E FS GPV ++ R + Y ++++ A A+ +
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 114 LNGRHLFGQPIKVNWAYASGQREDT---SGHFNIFVGDLSPEVTDATLFACFSVYPSCSD 170
+N + G+PI++ W+ QR+ + SG N+F+ +L + + L+ FS + +
Sbjct: 72 MNFDVIKGKPIRIMWS----QRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 171 ARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQS 230
+V+ D+ S+G+ FV F Q+ A AI + G L R++ G + ++
Sbjct: 128 CKVVCDENG--SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFV-------GRFKSRKE 178
Query: 231 SDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGV 290
+A EL + E +T VY+ N EV +L F G +
Sbjct: 179 REA----ELGAKAKE----------------FTNVYIKNFGEEVDDENLKELFSQFGKTL 218
Query: 291 IEEVRVQRD-----KGFGFVRYSTHAEAALAIQMGN 321
V+V RD KGFGFV Y H +A A++ N
Sbjct: 219 --SVKVMRDPSGKSKGFGFVSYEKHEDANKAVEEMN 252
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 129/283 (45%), Gaps = 31/283 (10%)
Query: 52 DPSTCRS----VYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRR 105
DPS +S V++ N+ + L + FS+ G + CK++ + S Y F+H+ +
Sbjct: 90 DPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQE 149
Query: 106 SAAMAILSLNGRHLFGQPIKVNWAYASGQREDTSG-----HFNIFVGDLSPEVTDATLFA 160
+A AI +NG L + + V + +RE G N+++ + EV D L
Sbjct: 150 AADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDENLKE 209
Query: 161 CFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATK 220
FS + +VM D +G+S+GFGFVS+ +DA A+ ++ GK + + I A K
Sbjct: 210 LFSQFGKTLSVKVMRD-PSGKSKGFGFVSYEKHEDANKAVEEMNGKEITGKVIFVGRAQK 268
Query: 221 GAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLH 280
++Q+ EL + +E + Q +Y+ NL + L
Sbjct: 269 KV----ERQA-------ELKRKFEQLKQERISRY------QGVNLYIKNLDDTIDDEKLR 311
Query: 281 RHFHSLGAGVIEEVRVQ--RDKGFGFVRYSTHAEAALAIQMGN 321
+ F G+ +V ++ R KGFGFV +S+ EA A+ N
Sbjct: 312 KEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMN 354
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 88/181 (48%), Gaps = 20/181 (11%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRK---DKSSYGFIHYFDRRSAAMAILSL 114
+VY+ N +V + L+E+FS G K++R +GF+ Y A A+ +
Sbjct: 192 NVYIKNFGEEVDDENLKELFSQFGKTLSVKVMRDPSGKSKGFGFVSYEKHEDANKAVEEM 251
Query: 115 NGRHLFGQPIKVNWAYASGQR-------------EDTSGH--FNIFVGDLSPEVTDATLF 159
NG+ + G+ I V A +R E S + N+++ +L + D L
Sbjct: 252 NGKEITGKVIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLR 311
Query: 160 ACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT 219
FS + S + A+VM + GRS+GFGFV F + ++A A+ ++ G+ +GS+ + A
Sbjct: 312 KEFSPFGSITSAKVMLED--GRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQ 369
Query: 220 K 220
+
Sbjct: 370 R 370
Score = 38.9 bits (89), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRRSAAMAILSLN 115
++Y+ N+ + + L++ FS G + K++ +D S +GF+ + A A+ +N
Sbjct: 295 NLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMN 354
Query: 116 GRHLFGQPIKVNWAYASGQRE 136
GR + +P+ V A +R+
Sbjct: 355 GRIVGSKPLYVALAQRKEERK 375
>gi|426215228|ref|XP_004001876.1| PREDICTED: polyadenylate-binding protein 4 isoform 2 [Ovis aries]
Length = 644
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 129/276 (46%), Gaps = 47/276 (17%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIR----KDKSSYGFIHYFDRRSAAMAILS 113
S+YVG++H+ VTE +L E FS GPV ++ R + Y ++++ A A+ +
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 114 LNGRHLFGQPIKVNWAYASGQREDT---SGHFNIFVGDLSPEVTDATLFACFSVYPSCSD 170
+N + G+PI++ W+ QR+ + SG N+F+ +L + + L+ FS + +
Sbjct: 72 MNFDVIKGKPIRIMWS----QRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 171 ARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQS 230
+V+ D+ S+G+ FV F Q+ A AI + G L R++ G + ++
Sbjct: 128 CKVVCDENG--SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFV-------GRFKSRKE 178
Query: 231 SDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGV 290
+A EL + E +T VY+ N EV +L F G +
Sbjct: 179 REA----ELGAKAKE----------------FTNVYIKNFGEEVDDENLKELFSQFGKTL 218
Query: 291 IEEVRVQRD-----KGFGFVRYSTHAEAALAIQMGN 321
V+V RD KGFGFV Y H +A A++ N
Sbjct: 219 --SVKVMRDPSGKSKGFGFVSYEKHEDANKAVEEMN 252
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 129/283 (45%), Gaps = 31/283 (10%)
Query: 52 DPSTCRS----VYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRR 105
DPS +S V++ N+ + L + FS+ G + CK++ + S Y F+H+ +
Sbjct: 90 DPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQE 149
Query: 106 SAAMAILSLNGRHLFGQPIKVNWAYASGQREDTSG-----HFNIFVGDLSPEVTDATLFA 160
+A AI +NG L + + V + +RE G N+++ + EV D L
Sbjct: 150 AADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDENLKE 209
Query: 161 CFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATK 220
FS + +VM D +G+S+GFGFVS+ +DA A+ ++ GK + + I A K
Sbjct: 210 LFSQFGKTLSVKVMRD-PSGKSKGFGFVSYEKHEDANKAVEEMNGKEITGKVIFVGRAQK 268
Query: 221 GAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLH 280
++Q+ EL + +E + Q +Y+ NL + L
Sbjct: 269 KV----ERQA-------ELKRKFEQLKQERISRY------QGVNLYIKNLDDTIDDEKLR 311
Query: 281 RHFHSLGAGVIEEVRVQ--RDKGFGFVRYSTHAEAALAIQMGN 321
+ F G+ +V ++ R KGFGFV +S+ EA A+ N
Sbjct: 312 KEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMN 354
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 88/181 (48%), Gaps = 20/181 (11%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRK---DKSSYGFIHYFDRRSAAMAILSL 114
+VY+ N +V + L+E+FS G K++R +GF+ Y A A+ +
Sbjct: 192 NVYIKNFGEEVDDENLKELFSQFGKTLSVKVMRDPSGKSKGFGFVSYEKHEDANKAVEEM 251
Query: 115 NGRHLFGQPIKVNWAYASGQR-------------EDTSGH--FNIFVGDLSPEVTDATLF 159
NG+ + G+ I V A +R E S + N+++ +L + D L
Sbjct: 252 NGKEITGKVIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLR 311
Query: 160 ACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT 219
FS + S + A+VM + GRS+GFGFV F + ++A A+ ++ G+ +GS+ + A
Sbjct: 312 KEFSPFGSITSAKVMLED--GRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQ 369
Query: 220 K 220
+
Sbjct: 370 R 370
Score = 38.9 bits (89), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRRSAAMAILSLN 115
++Y+ N+ + + L++ FS G + K++ +D S +GF+ + A A+ +N
Sbjct: 295 NLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMN 354
Query: 116 GRHLFGQPIKVNWAYASGQRE 136
GR + +P+ V A +R+
Sbjct: 355 GRIVGSKPLYVALAQRKEERK 375
>gi|348553000|ref|XP_003462315.1| PREDICTED: polyadenylate-binding protein 4-like isoform 4 [Cavia
porcellus]
Length = 631
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 129/276 (46%), Gaps = 47/276 (17%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIR----KDKSSYGFIHYFDRRSAAMAILS 113
S+YVG++H+ VTE +L E FS GPV ++ R + Y ++++ A A+ +
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 114 LNGRHLFGQPIKVNWAYASGQREDT---SGHFNIFVGDLSPEVTDATLFACFSVYPSCSD 170
+N + G+PI++ W+ QR+ + SG N+F+ +L + + L+ FS + +
Sbjct: 72 MNFDVIKGKPIRIMWS----QRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 171 ARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQS 230
+V+ D+ S+G+ FV F Q+ A AI + G L R++ G + ++
Sbjct: 128 CKVVCDENG--SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFV-------GRFKSRKE 178
Query: 231 SDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGV 290
+A EL + E +T VY+ N EV +L F G +
Sbjct: 179 REA----ELGAKAKE----------------FTNVYIKNFGEEVDDENLKELFSQFGKTL 218
Query: 291 IEEVRVQRD-----KGFGFVRYSTHAEAALAIQMGN 321
V+V RD KGFGFV Y H +A A++ N
Sbjct: 219 --SVKVMRDPSGKSKGFGFVSYEKHEDANKAVEEMN 252
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 129/283 (45%), Gaps = 31/283 (10%)
Query: 52 DPSTCRS----VYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRR 105
DPS +S V++ N+ + L + FS+ G + CK++ + S Y F+H+ +
Sbjct: 90 DPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQE 149
Query: 106 SAAMAILSLNGRHLFGQPIKVNWAYASGQREDTSG-----HFNIFVGDLSPEVTDATLFA 160
+A AI +NG L + + V + +RE G N+++ + EV D L
Sbjct: 150 AADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDENLKE 209
Query: 161 CFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATK 220
FS + +VM D +G+S+GFGFVS+ +DA A+ ++ GK + + I A K
Sbjct: 210 LFSQFGKTLSVKVMRD-PSGKSKGFGFVSYEKHEDANKAVEEMNGKEINGKIIFVGRAQK 268
Query: 221 GAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLH 280
++Q+ EL + +E + Q +Y+ NL + L
Sbjct: 269 KV----ERQA-------ELKRKFEQLKQERISRY------QGVNLYIKNLDDTIDDEKLR 311
Query: 281 RHFHSLGAGVIEEVRVQ--RDKGFGFVRYSTHAEAALAIQMGN 321
+ F G+ +V ++ R KGFGFV +S+ EA A+ N
Sbjct: 312 KEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMN 354
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 88/181 (48%), Gaps = 20/181 (11%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRK---DKSSYGFIHYFDRRSAAMAILSL 114
+VY+ N +V + L+E+FS G K++R +GF+ Y A A+ +
Sbjct: 192 NVYIKNFGEEVDDENLKELFSQFGKTLSVKVMRDPSGKSKGFGFVSYEKHEDANKAVEEM 251
Query: 115 NGRHLFGQPIKVNWAYASGQR-------------EDTSGH--FNIFVGDLSPEVTDATLF 159
NG+ + G+ I V A +R E S + N+++ +L + D L
Sbjct: 252 NGKEINGKIIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLR 311
Query: 160 ACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT 219
FS + S + A+VM + GRS+GFGFV F + ++A A+ ++ G+ +GS+ + A
Sbjct: 312 KEFSPFGSITSAKVMLED--GRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQ 369
Query: 220 K 220
+
Sbjct: 370 R 370
Score = 38.9 bits (89), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRRSAAMAILSLN 115
++Y+ N+ + + L++ FS G + K++ +D S +GF+ + A A+ +N
Sbjct: 295 NLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMN 354
Query: 116 GRHLFGQPIKVNWAYASGQRE 136
GR + +P+ V A +R+
Sbjct: 355 GRIVGSKPLYVALAQRKEERK 375
>gi|255077948|ref|XP_002502554.1| predicted protein [Micromonas sp. RCC299]
gi|226517819|gb|ACO63812.1| predicted protein [Micromonas sp. RCC299]
Length = 325
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 65/175 (37%), Positives = 95/175 (54%), Gaps = 9/175 (5%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS-----YGFIHYFDRRSAAMAIL 112
+VYVGN+ QVTE ++ EVF GPV + KD+ S Y F+ Y A AI
Sbjct: 32 TVYVGNLDPQVTEEIVWEVFVQAGPVVNVYM-PKDRVSNAHQGYAFVEYRGEEDADYAIK 90
Query: 113 SLNGRHLFGQPIKVNWAYASGQREDTSGHFNIFVGDLSPEVTDATLFACFSVY-PSCSDA 171
LN LFG+PI+ N A + D N+FVG+L P++ + L+ FS + +
Sbjct: 91 VLNMIKLFGKPIRANKASVDKKSTDVGA--NLFVGNLDPDMDEKLLYDTFSAFGVVITTP 148
Query: 172 RVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNE 226
++M D TG SRGFGFVS+ + + + +AI + G++L +R I +A K N E
Sbjct: 149 KIMRDPDTGNSRGFGFVSYDSFEASDAAIEAMNGQFLCNRPISVTYAYKKDTNGE 203
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 89/208 (42%), Gaps = 44/208 (21%)
Query: 144 IFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDL 203
++VG+L P+VT+ ++ F + + D+ + +G+ FV +R ++DA AI L
Sbjct: 33 VYVGNLDPQVTEEIVWEVFVQAGPVVNVYMPKDRVSNAHQGYAFVEYRGEEDADYAIKVL 92
Query: 204 TGKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYT 263
L + IR N A+ DK+S+D +
Sbjct: 93 NMIKLFGKPIRANKASV------DKKSTDVGA---------------------------- 118
Query: 264 TVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRD------KGFGFVRYSTHAEAALAI 317
++VGNL P++ + L+ F + G VI ++ RD +GFGFV Y + + AI
Sbjct: 119 NLFVGNLDPDMDEKLLYDTFSAFGV-VITTPKIMRDPDTGNSRGFGFVSYDSFEASDAAI 177
Query: 318 QMGNTTQSSYLFGKQMKCSWGSKPTPPG 345
+ N +L + + ++ K G
Sbjct: 178 EAMN---GQFLCNRPISVTYAYKKDTNG 202
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 45/85 (52%), Gaps = 11/85 (12%)
Query: 261 QYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDK------GFGFVRYSTHAEAA 314
Q TVYVGNL P+VT+ + F + AG + V + +D+ G+ FV Y +A
Sbjct: 29 QEATVYVGNLDPQVTEEIVWEVF--VQAGPVVNVYMPKDRVSNAHQGYAFVEYRGEEDAD 86
Query: 315 LAIQMGNTTQSSYLFGKQMKCSWGS 339
AI++ N + LFGK ++ + S
Sbjct: 87 YAIKVLNMIK---LFGKPIRANKAS 108
>gi|119596297|gb|EAW75891.1| hCG2019100, isoform CRA_e [Homo sapiens]
Length = 617
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 83/279 (29%), Positives = 130/279 (46%), Gaps = 43/279 (15%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIR----KDKSSYGFIHYFDRRSAAMAILS 113
S+YVG++H VTE +L E FS GP+ ++ R + Y +I++ A A+ +
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADAERALDT 71
Query: 114 LNGRHLFGQPIKVNWAYAS-GQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDAR 172
+N L GQPI++ W+ G R+ SG NIF+ +L + + L+ FS + + +
Sbjct: 72 MNFEMLKGQPIRIMWSQRDPGLRK--SGVGNIFIKNLEDSIDNKALYDTFSTFGNILSCK 129
Query: 173 VMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSSD 232
V D+ SRGFGFV F + AQ AIN + G L R++ G+ + ++ +
Sbjct: 130 VACDEHG--SRGFGFVHFETHEAAQQAINTMNGMLLNDRKV-------FVGHFKSRRERE 180
Query: 233 AKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIE 292
A EL + E +T +YV NL +V + L F G +
Sbjct: 181 A----ELGARALE----------------FTNIYVKNLPVDVDEQGLQDLFSQFGKML-- 218
Query: 293 EVRVQRD-----KGFGFVRYSTHAEAALAIQMGNTTQSS 326
V+V RD + FGFV + H EA A+ N + S
Sbjct: 219 SVKVMRDNSGHSRCFGFVNFEKHEEAQKAVVHMNGKEVS 257
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 77/285 (27%), Positives = 122/285 (42%), Gaps = 33/285 (11%)
Query: 49 PGFDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRRS 106
PG S ++++ N+ + L + FS+ G + CK+ + S +GF+H+ +
Sbjct: 91 PGLRKSGVGNIFIKNLEDSIDNKALYDTFSTFGNILSCKVACDEHGSRGFGFVHFETHEA 150
Query: 107 AAMAILSLNGRHLFGQPIKVNWAYASGQREDTSG-----HFNIFVGDLSPEVTDATLFAC 161
A AI ++NG L + + V + +RE G NI+V +L +V + L
Sbjct: 151 AQQAINTMNGMLLNDRKVFVGHFKSRREREAELGARALEFTNIYVKNLPVDVDEQGLQDL 210
Query: 162 FSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKG 221
FS + +VM D +G SR FGFV+F ++AQ A+ + GK + R + A K
Sbjct: 211 FSQFGKMLSVKVMRDN-SGHSRCFGFVNFEKHEEAQKAVVHMNGKEVSGRLLYAGRAQKR 269
Query: 222 AGN-NEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLH 280
NE K+ + L Q +YV NL + L
Sbjct: 270 VERQNELKRRFEQMKQDRL------------------RRYQGVNLYVKNLDDSIDDDKLR 311
Query: 281 RHFHSLGAGVIEEVRVQRD----KGFGFVRYSTHAEAALAIQMGN 321
+ F GVI +V + KGFGFV +S+ EA A+ N
Sbjct: 312 KEFSPY--GVITSAKVMTEGGHSKGFGFVCFSSPEEATKAVTEMN 354
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 88/181 (48%), Gaps = 20/181 (11%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDK---SSYGFIHYFDRRSAAMAILSL 114
++YV N+ V E LQ++FS G + K++R + +GF+++ A A++ +
Sbjct: 192 NIYVKNLPVDVDEQGLQDLFSQFGKMLSVKVMRDNSGHSRCFGFVNFEKHEEAQKAVVHM 251
Query: 115 NGRHLFGQPIKVNWAYASGQREDTSGH---------------FNIFVGDLSPEVTDATLF 159
NG+ + G+ + A +R++ N++V +L + D L
Sbjct: 252 NGKEVSGRLLYAGRAQKRVERQNELKRRFEQMKQDRLRRYQGVNLYVKNLDDSIDDDKLR 311
Query: 160 ACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT 219
FS Y + A+VM + G S+GFGFV F + ++A A+ ++ G+ +G++ + A
Sbjct: 312 KEFSPYGVITSAKVMTE--GGHSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQ 369
Query: 220 K 220
+
Sbjct: 370 R 370
>gi|426215226|ref|XP_004001875.1| PREDICTED: polyadenylate-binding protein 4 isoform 1 [Ovis aries]
Length = 660
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 129/276 (46%), Gaps = 47/276 (17%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIR----KDKSSYGFIHYFDRRSAAMAILS 113
S+YVG++H+ VTE +L E FS GPV ++ R + Y ++++ A A+ +
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 114 LNGRHLFGQPIKVNWAYASGQREDT---SGHFNIFVGDLSPEVTDATLFACFSVYPSCSD 170
+N + G+PI++ W+ QR+ + SG N+F+ +L + + L+ FS + +
Sbjct: 72 MNFDVIKGKPIRIMWS----QRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 171 ARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQS 230
+V+ D+ S+G+ FV F Q+ A AI + G L R++ G + ++
Sbjct: 128 CKVVCDENG--SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFV-------GRFKSRKE 178
Query: 231 SDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGV 290
+A EL + E +T VY+ N EV +L F G +
Sbjct: 179 REA----ELGAKAKE----------------FTNVYIKNFGEEVDDENLKELFSQFGKTL 218
Query: 291 IEEVRVQRD-----KGFGFVRYSTHAEAALAIQMGN 321
V+V RD KGFGFV Y H +A A++ N
Sbjct: 219 --SVKVMRDPSGKSKGFGFVSYEKHEDANKAVEEMN 252
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 129/283 (45%), Gaps = 31/283 (10%)
Query: 52 DPSTCRS----VYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRR 105
DPS +S V++ N+ + L + FS+ G + CK++ + S Y F+H+ +
Sbjct: 90 DPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQE 149
Query: 106 SAAMAILSLNGRHLFGQPIKVNWAYASGQREDTSG-----HFNIFVGDLSPEVTDATLFA 160
+A AI +NG L + + V + +RE G N+++ + EV D L
Sbjct: 150 AADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDENLKE 209
Query: 161 CFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATK 220
FS + +VM D +G+S+GFGFVS+ +DA A+ ++ GK + + I A K
Sbjct: 210 LFSQFGKTLSVKVMRD-PSGKSKGFGFVSYEKHEDANKAVEEMNGKEITGKVIFVGRAQK 268
Query: 221 GAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLH 280
++Q+ EL + +E + Q +Y+ NL + L
Sbjct: 269 KV----ERQA-------ELKRKFEQLKQERISRY------QGVNLYIKNLDDTIDDEKLR 311
Query: 281 RHFHSLGAGVIEEVRVQ--RDKGFGFVRYSTHAEAALAIQMGN 321
+ F G+ +V ++ R KGFGFV +S+ EA A+ N
Sbjct: 312 KEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMN 354
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 88/181 (48%), Gaps = 20/181 (11%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRK---DKSSYGFIHYFDRRSAAMAILSL 114
+VY+ N +V + L+E+FS G K++R +GF+ Y A A+ +
Sbjct: 192 NVYIKNFGEEVDDENLKELFSQFGKTLSVKVMRDPSGKSKGFGFVSYEKHEDANKAVEEM 251
Query: 115 NGRHLFGQPIKVNWAYASGQR-------------EDTSGH--FNIFVGDLSPEVTDATLF 159
NG+ + G+ I V A +R E S + N+++ +L + D L
Sbjct: 252 NGKEITGKVIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLR 311
Query: 160 ACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT 219
FS + S + A+VM + GRS+GFGFV F + ++A A+ ++ G+ +GS+ + A
Sbjct: 312 KEFSPFGSITSAKVMLED--GRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQ 369
Query: 220 K 220
+
Sbjct: 370 R 370
Score = 38.9 bits (89), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRRSAAMAILSLN 115
++Y+ N+ + + L++ FS G + K++ +D S +GF+ + A A+ +N
Sbjct: 295 NLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMN 354
Query: 116 GRHLFGQPIKVNWAYASGQRE 136
GR + +P+ V A +R+
Sbjct: 355 GRIVGSKPLYVALAQRKEERK 375
>gi|392558545|gb|EIW51732.1| polyadenylate binding protein [Trametes versicolor FP-101664 SS1]
Length = 631
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 131/271 (48%), Gaps = 42/271 (15%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIR----KDKSSYGFIHYFDRRSAAMAILS 113
S+YVG + VTE +L E+F+ GPV ++ R + Y +++Y + A+
Sbjct: 8 SLYVGELDPTVTEAMLFEIFNMIGPVASIRVCRDAVTRRSLGYAYVNYLNAADGERALEQ 67
Query: 114 LNGRHLFGQPIKVNWAYASGQRE---DTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSD 170
LN + G+ ++ W+ QR+ +G NIF+ +L ++ + L F+ + +
Sbjct: 68 LNYSLIKGRACRIMWS----QRDPALRKTGQGNIFIKNLDEQIDNKALHDTFAAFGNVLS 123
Query: 171 ARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQS 230
+V D+ GRS+G+GFV + + A++AI + G L +++ G++ ++
Sbjct: 124 CKVATDEH-GRSKGYGFVHYETAEAAETAIKAVNGMLLNDKKVYV-------GHHISRKE 175
Query: 231 SDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLG--- 287
+K + E+ N Q+T +YV N+ PEVTQ + + F G
Sbjct: 176 RQSK-IEEMKN-------------------QFTNIYVKNVDPEVTQEEFVQLFEPFGRIT 215
Query: 288 AGVIEEVRVQRDKGFGFVRYSTHAEAALAIQ 318
+ V++ + +GFGFV + TH EA A++
Sbjct: 216 SAVLQVDDEGKSRGFGFVNFDTHEEAHAAVE 246
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 75/278 (26%), Positives = 126/278 (45%), Gaps = 34/278 (12%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKD---KSSYGFIHYFDRRSAAMAILSL 114
++++ N+ Q+ L + F++ G V CK+ + YGF+HY +A AI ++
Sbjct: 96 NIFIKNLDEQIDNKALHDTFAAFGNVLSCKVATDEHGRSKGYGFVHYETAEAAETAIKAV 155
Query: 115 NGRHLFGQPIKVNWAYASGQR----EDTSGHF-NIFVGDLSPEVTDATLFACFSVYPSCS 169
NG L + + V + +R E+ F NI+V ++ PEVT F + +
Sbjct: 156 NGMLLNDKKVYVGHHISRKERQSKIEEMKNQFTNIYVKNVDPEVTQEEFVQLFEPFGRIT 215
Query: 170 DARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQ 229
A + D + G+SRGFGFV+F ++A +A+ L + R++ A K A E+ +
Sbjct: 216 SAVLQVDDE-GKSRGFGFVNFDTHEEAHAAVEALHDSDVKGRKLFVARAQKKAEREEELR 274
Query: 230 SSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAG 289
S ++ +E + Q +Y+ NL ++ L F G
Sbjct: 275 RSYEQAKMEKMSKY-----------------QGVNLYIKNLEDDIDDERLRGEFEPFGN- 316
Query: 290 VIEEVRVQRD-----KGFGFVRYSTHAEAALAI-QMGN 321
I +V RD KGFGFV +S+ EA A+ +M N
Sbjct: 317 -ITSAKVMRDEKGISKGFGFVCFSSPDEATKAVAEMNN 353
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 86/181 (47%), Gaps = 19/181 (10%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS---YGFIHYFDRRSAAMAILSL 114
++YV N+ +VT+ ++F G + L D+ +GF+++ A A+ +L
Sbjct: 189 NIYVKNVDPEVTQEEFVQLFEPFGRITSAVLQVDDEGKSRGFGFVNFDTHEEAHAAVEAL 248
Query: 115 NGRHLFGQPIKVNWAYASGQREDTSGH---------------FNIFVGDLSPEVTDATLF 159
+ + G+ + V A +RE+ N+++ +L ++ D L
Sbjct: 249 HDSDVKGRKLFVARAQKKAEREEELRRSYEQAKMEKMSKYQGVNLYIKNLEDDIDDERLR 308
Query: 160 ACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT 219
F + + + A+VM D+K G S+GFGFV F + +A A+ ++ K +G++ + + A
Sbjct: 309 GEFEPFGNITSAKVMRDEK-GISKGFGFVCFSSPDEATKAVAEMNNKMIGTKPLYVSLAQ 367
Query: 220 K 220
+
Sbjct: 368 R 368
>gi|348552994|ref|XP_003462312.1| PREDICTED: polyadenylate-binding protein 4-like isoform 1 [Cavia
porcellus]
Length = 660
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 129/276 (46%), Gaps = 47/276 (17%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIR----KDKSSYGFIHYFDRRSAAMAILS 113
S+YVG++H+ VTE +L E FS GPV ++ R + Y ++++ A A+ +
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 114 LNGRHLFGQPIKVNWAYASGQREDT---SGHFNIFVGDLSPEVTDATLFACFSVYPSCSD 170
+N + G+PI++ W+ QR+ + SG N+F+ +L + + L+ FS + +
Sbjct: 72 MNFDVIKGKPIRIMWS----QRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 171 ARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQS 230
+V+ D+ S+G+ FV F Q+ A AI + G L R++ G + ++
Sbjct: 128 CKVVCDENG--SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFV-------GRFKSRKE 178
Query: 231 SDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGV 290
+A EL + E +T VY+ N EV +L F G +
Sbjct: 179 REA----ELGAKAKE----------------FTNVYIKNFGEEVDDENLKELFSQFGKTL 218
Query: 291 IEEVRVQRD-----KGFGFVRYSTHAEAALAIQMGN 321
V+V RD KGFGFV Y H +A A++ N
Sbjct: 219 --SVKVMRDPSGKSKGFGFVSYEKHEDANKAVEEMN 252
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 129/283 (45%), Gaps = 31/283 (10%)
Query: 52 DPSTCRS----VYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRR 105
DPS +S V++ N+ + L + FS+ G + CK++ + S Y F+H+ +
Sbjct: 90 DPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQE 149
Query: 106 SAAMAILSLNGRHLFGQPIKVNWAYASGQREDTSG-----HFNIFVGDLSPEVTDATLFA 160
+A AI +NG L + + V + +RE G N+++ + EV D L
Sbjct: 150 AADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDENLKE 209
Query: 161 CFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATK 220
FS + +VM D +G+S+GFGFVS+ +DA A+ ++ GK + + I A K
Sbjct: 210 LFSQFGKTLSVKVMRD-PSGKSKGFGFVSYEKHEDANKAVEEMNGKEINGKIIFVGRAQK 268
Query: 221 GAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLH 280
++Q+ EL + +E + Q +Y+ NL + L
Sbjct: 269 KV----ERQA-------ELKRKFEQLKQERISRY------QGVNLYIKNLDDTIDDEKLR 311
Query: 281 RHFHSLGAGVIEEVRVQ--RDKGFGFVRYSTHAEAALAIQMGN 321
+ F G+ +V ++ R KGFGFV +S+ EA A+ N
Sbjct: 312 KEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMN 354
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 88/181 (48%), Gaps = 20/181 (11%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRK---DKSSYGFIHYFDRRSAAMAILSL 114
+VY+ N +V + L+E+FS G K++R +GF+ Y A A+ +
Sbjct: 192 NVYIKNFGEEVDDENLKELFSQFGKTLSVKVMRDPSGKSKGFGFVSYEKHEDANKAVEEM 251
Query: 115 NGRHLFGQPIKVNWAYASGQR-------------EDTSGH--FNIFVGDLSPEVTDATLF 159
NG+ + G+ I V A +R E S + N+++ +L + D L
Sbjct: 252 NGKEINGKIIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLR 311
Query: 160 ACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT 219
FS + S + A+VM + GRS+GFGFV F + ++A A+ ++ G+ +GS+ + A
Sbjct: 312 KEFSPFGSITSAKVMLED--GRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQ 369
Query: 220 K 220
+
Sbjct: 370 R 370
Score = 38.9 bits (89), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRRSAAMAILSLN 115
++Y+ N+ + + L++ FS G + K++ +D S +GF+ + A A+ +N
Sbjct: 295 NLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMN 354
Query: 116 GRHLFGQPIKVNWAYASGQRE 136
GR + +P+ V A +R+
Sbjct: 355 GRIVGSKPLYVALAQRKEERK 375
>gi|194379766|dbj|BAG58235.1| unnamed protein product [Homo sapiens]
Length = 181
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 69/179 (38%), Positives = 99/179 (55%), Gaps = 19/179 (10%)
Query: 170 DARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQ 229
DARV+ D TG+S+G+GFVSF N+ DA++AI + G+WLG RQIR NWAT+ + Q
Sbjct: 2 DARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQ 61
Query: 230 SSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAG 289
++ K + ++ N +P+N TVY G +A +T + + F G
Sbjct: 62 ENNTKQL---------RFEDVVNQSSPKN----CTVYCGGIASGLTDQLMRQTFSPFGQ- 107
Query: 290 VIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSKPTPPGTSS 348
I E+RV +KG+ FVR+STH AA I N T + G +KC WG K +P T +
Sbjct: 108 -IMEIRVFPEKGYSFVRFSTHESAAHVIVSVNGTT---IEGHVVKCYWG-KESPDMTKN 161
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 32/141 (22%), Positives = 59/141 (41%), Gaps = 25/141 (17%)
Query: 96 YGFIHYFDRRSAAMAILSLNGRHLFGQPIKVNWAY------ASGQREDTS---------- 139
YGF+ ++++ A AI+ + G+ L G+ I+ NWA S Q +T
Sbjct: 17 YGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQ 76
Query: 140 ---GHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDA 196
+ ++ G ++ +TD + FS + + RV +G+ FV F + A
Sbjct: 77 SSPKNCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVF------PEKGYSFVRFSTHESA 130
Query: 197 QSAINDLTGKWLGSRQIRCNW 217
I + G + ++C W
Sbjct: 131 AHVIVSVNGTTIEGHVVKCYW 151
Score = 43.5 bits (101), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 41/80 (51%), Gaps = 3/80 (3%)
Query: 53 PSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSSYGFIHYFDRRSAAMAIL 112
P C +VY G I + +T+ L+++ FS G + ++ + Y F+ + SAA I+
Sbjct: 79 PKNC-TVYCGGIASGLTDQLMRQTFSPFGQIMEIRVF--PEKGYSFVRFSTHESAAHVIV 135
Query: 113 SLNGRHLFGQPIKVNWAYAS 132
S+NG + G +K W S
Sbjct: 136 SVNGTTIEGHVVKCYWGKES 155
>gi|344287653|ref|XP_003415567.1| PREDICTED: polyadenylate-binding protein 4 isoform 2 [Loxodonta
africana]
Length = 660
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 130/281 (46%), Gaps = 47/281 (16%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIR----KDKSSYGFIHYFDRRSAAMAILS 113
S+YVG++H+ VTE +L E FS GPV ++ R + Y ++++ A A+ +
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 114 LNGRHLFGQPIKVNWAYASGQREDT---SGHFNIFVGDLSPEVTDATLFACFSVYPSCSD 170
+N + G+PI++ W+ QR+ + SG N+F+ +L + + L+ FS + +
Sbjct: 72 MNFDVIKGKPIRIMWS----QRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 171 ARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQS 230
+V+ D+ S+G+ FV F Q+ A AI + G L R++ G + ++
Sbjct: 128 CKVVCDENG--SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFV-------GRFKSRKE 178
Query: 231 SDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGV 290
+A EL + E +T VY+ N EV L F G +
Sbjct: 179 REA----ELGAKAKE----------------FTNVYIKNFGEEVDDESLKELFSQFGKTL 218
Query: 291 IEEVRVQRD-----KGFGFVRYSTHAEAALAIQMGNTTQSS 326
V+V RD KGFGFV Y H +A A++ N + S
Sbjct: 219 --SVKVMRDPSGKSKGFGFVSYEKHEDANKAVEEMNGKEIS 257
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 130/283 (45%), Gaps = 31/283 (10%)
Query: 52 DPSTCRS----VYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRR 105
DPS +S V++ N+ + L + FS+ G + CK++ + S Y F+H+ +
Sbjct: 90 DPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQE 149
Query: 106 SAAMAILSLNGRHLFGQPIKVNWAYASGQREDTSG-----HFNIFVGDLSPEVTDATLFA 160
+A AI +NG L + + V + +RE G N+++ + EV D +L
Sbjct: 150 AADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKE 209
Query: 161 CFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATK 220
FS + +VM D +G+S+GFGFVS+ +DA A+ ++ GK + + I A K
Sbjct: 210 LFSQFGKTLSVKVMRD-PSGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKVIFVGRAQK 268
Query: 221 GAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLH 280
++Q+ EL + +E + Q +Y+ NL + L
Sbjct: 269 KV----ERQA-------ELKRKFEQLKQERISRY------QGVNLYIKNLDDTIDDEKLR 311
Query: 281 RHFHSLGAGVIEEVRVQ--RDKGFGFVRYSTHAEAALAIQMGN 321
+ F G+ +V ++ R KGFGFV +S+ EA A+ N
Sbjct: 312 KEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMN 354
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 88/181 (48%), Gaps = 20/181 (11%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRK---DKSSYGFIHYFDRRSAAMAILSL 114
+VY+ N +V + L+E+FS G K++R +GF+ Y A A+ +
Sbjct: 192 NVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGKSKGFGFVSYEKHEDANKAVEEM 251
Query: 115 NGRHLFGQPIKVNWAYASGQR-------------EDTSGH--FNIFVGDLSPEVTDATLF 159
NG+ + G+ I V A +R E S + N+++ +L + D L
Sbjct: 252 NGKEISGKVIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLR 311
Query: 160 ACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT 219
FS + S + A+VM + GRS+GFGFV F + ++A A+ ++ G+ +GS+ + A
Sbjct: 312 KEFSPFGSITSAKVMLED--GRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQ 369
Query: 220 K 220
+
Sbjct: 370 R 370
Score = 38.9 bits (89), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRRSAAMAILSLN 115
++Y+ N+ + + L++ FS G + K++ +D S +GF+ + A A+ +N
Sbjct: 295 NLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMN 354
Query: 116 GRHLFGQPIKVNWAYASGQRE 136
GR + +P+ V A +R+
Sbjct: 355 GRIVGSKPLYVALAQRKEERK 375
>gi|406698471|gb|EKD01707.1| polyadenylate-binding protein [Trichosporon asahii var. asahii CBS
8904]
Length = 686
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 79/298 (26%), Positives = 132/298 (44%), Gaps = 45/298 (15%)
Query: 53 PSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIR----KDKSSYGFIHYFDRRSAA 108
P S+YVG + VTE +L E+F+ GPV ++ R + Y +++Y +
Sbjct: 53 PGNSASLYVGELDPSVTEAMLFEIFNMVGPVASIRVCRDAVTRRSLGYAYVNYLNAADGE 112
Query: 109 MAILSLNGRHLFGQPIKVNWAYASGQRE---DTSGHFNIFVGDLSPEVTDATLFACFSVY 165
A+ LN + +P ++ W+ QR+ +G NIF+ +L ++ + L F+ +
Sbjct: 113 RALEHLNYSLIKNRPCRIMWS----QRDPALRKTGQGNIFIKNLDDKIDNKALHDTFAAF 168
Query: 166 PSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNN 225
+ +V D+ G SRGF FV + + A +AI + G L +++ G++
Sbjct: 169 GNILSCKVATDE-NGNSRGFAFVHYETGEAADAAIKSVNGMLLNDKKVYV-------GHH 220
Query: 226 EDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHS 285
K+ +K VE E ++T +++ NL PE TQ DL F
Sbjct: 221 ISKKERQSK--VE------------------EQRAKFTNIFIKNLEPEFTQKDLEDMFKP 260
Query: 286 LGAGVIEEVRVQRD---KGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSK 340
G V + V D KGF FV Y+TH A A+ N + + GK++ K
Sbjct: 261 FGEIVSAALSVGEDGLSKGFAFVNYTTHDAAKKAVDELNDKE---INGKKLYVGRAQK 315
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 121/277 (43%), Gaps = 33/277 (11%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS---YGFIHYFDRRSAAMAILSL 114
++++ N+ ++ L + F++ G + CK+ + + + F+HY +A AI S+
Sbjct: 146 NIFIKNLDDKIDNKALHDTFAAFGNILSCKVATDENGNSRGFAFVHYETGEAADAAIKSV 205
Query: 115 NGRHLFGQPIKVNWAYASGQR----EDTSGHF-NIFVGDLSPEVTDATLFACFSVYPSCS 169
NG L + + V + +R E+ F NIF+ +L PE T L F +
Sbjct: 206 NGMLLNDKKVYVGHHISKKERQSKVEEQRAKFTNIFIKNLEPEFTQKDLEDMFKPFGEIV 265
Query: 170 DARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQ 229
A + + G S+GF FV++ A+ A+++L K + +++ A K A +E+ +
Sbjct: 266 SAALSVGE-DGLSKGFAFVNYTTHDAAKKAVDELNDKEINGKKLYVGRAQKRAERDEELR 324
Query: 230 SSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAG 289
+ +E N S G +YV N+ E L F AG
Sbjct: 325 RMHEERRLE--NESKTAG---------------VNLYVKNIDDEWDDDRLRSEFDF--AG 365
Query: 290 VIEEVRVQRD-----KGFGFVRYSTHAEAALAIQMGN 321
I +V RD +GFGFV +S EA A+Q N
Sbjct: 366 TITSAKVMRDDKGASRGFGFVCFSQPDEATRAVQEMN 402
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 87/181 (48%), Gaps = 19/181 (10%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKL-IRKDKSSYGF--IHYFDRRSAAMAILSL 114
++++ N+ + T+ L+++F G + L + +D S GF ++Y +A A+ L
Sbjct: 239 NIFIKNLEPEFTQKDLEDMFKPFGEIVSAALSVGEDGLSKGFAFVNYTTHDAAKKAVDEL 298
Query: 115 NGRHLFGQPIKVNWAYASGQR---------------EDTSGHFNIFVGDLSPEVTDATLF 159
N + + G+ + V A +R E + N++V ++ E D L
Sbjct: 299 NDKEINGKKLYVGRAQKRAERDEELRRMHEERRLENESKTAGVNLYVKNIDDEWDDDRLR 358
Query: 160 ACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT 219
+ F + + A+VM D K G SRGFGFV F +A A+ ++ GK +G++ + + A
Sbjct: 359 SEFDFAGTITSAKVMRDDK-GASRGFGFVCFSQPDEATRAVQEMNGKMIGTKPLYVSLAQ 417
Query: 220 K 220
K
Sbjct: 418 K 418
>gi|62088100|dbj|BAD92497.1| TIA1 cytotoxic granule-associated RNA-binding protein-like 1
isoform 2 variant [Homo sapiens]
Length = 183
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 69/179 (38%), Positives = 100/179 (55%), Gaps = 19/179 (10%)
Query: 170 DARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQ 229
DARV+ D TG+S+G+GFVSF N+ DA++AI + G+WLG R+IR NWAT+ + Q
Sbjct: 4 DARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRKIRTNWATRKPPAPKSTQ 63
Query: 230 SSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAG 289
++ K + ++ N +P+N TVY G +A +T + + F G
Sbjct: 64 ENNTKQL---------RFEDVVNQSSPKN----CTVYCGGIASGLTDQLMRQTFSPFGQ- 109
Query: 290 VIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSKPTPPGTSS 348
I E+RV +KG+ FVR+STH AA AI N T + G +KC WG K +P T +
Sbjct: 110 -IMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTT---IEGHVVKCYWG-KESPDMTKN 163
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 61/141 (43%), Gaps = 25/141 (17%)
Query: 96 YGFIHYFDRRSAAMAILSLNGRHLFGQPIKVNWAY------ASGQREDTS---------- 139
YGF+ ++++ A AI+ + G+ L G+ I+ NWA S Q +T
Sbjct: 19 YGFVSFYNKLDAENAIVHMGGQWLGGRKIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQ 78
Query: 140 ---GHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDA 196
+ ++ G ++ +TD + FS + + RV + +G+ FV F + A
Sbjct: 79 SSPKNCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPE------KGYSFVRFSTHESA 132
Query: 197 QSAINDLTGKWLGSRQIRCNW 217
AI + G + ++C W
Sbjct: 133 AHAIVSVNGTTIEGHVVKCYW 153
Score = 45.1 bits (105), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 42/80 (52%), Gaps = 3/80 (3%)
Query: 53 PSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSSYGFIHYFDRRSAAMAIL 112
P C +VY G I + +T+ L+++ FS G + ++ + Y F+ + SAA AI+
Sbjct: 81 PKNC-TVYCGGIASGLTDQLMRQTFSPFGQIMEIRVF--PEKGYSFVRFSTHESAAHAIV 137
Query: 113 SLNGRHLFGQPIKVNWAYAS 132
S+NG + G +K W S
Sbjct: 138 SVNGTTIEGHVVKCYWGKES 157
>gi|41388837|gb|AAH65540.1| PABPC4 protein [Homo sapiens]
Length = 631
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 130/281 (46%), Gaps = 47/281 (16%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIR----KDKSSYGFIHYFDRRSAAMAILS 113
S+YVG++H+ VTE +L E FS GPV ++ R + Y ++++ A A+ +
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 114 LNGRHLFGQPIKVNWAYASGQREDT---SGHFNIFVGDLSPEVTDATLFACFSVYPSCSD 170
+N + G+PI++ W+ QR+ + SG N+F+ +L + + L+ FS + +
Sbjct: 72 MNFDVIKGKPIRIMWS----QRDPSLRKSGVGNVFIKNLDKSIDNKVLYDTFSAFGNILS 127
Query: 171 ARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQS 230
+V+ D+ S+G+ FV F Q+ A AI + G L R++ G + ++
Sbjct: 128 CKVVCDENG--SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFV-------GRFKSRKE 178
Query: 231 SDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGV 290
+A EL + E +T VY+ N EV L F G +
Sbjct: 179 REA----ELGAKAKE----------------FTNVYIKNFGEEVDDESLKELFSQFGKTL 218
Query: 291 IEEVRVQRD-----KGFGFVRYSTHAEAALAIQMGNTTQSS 326
V+V RD KGFGFV Y H +A A++ N + S
Sbjct: 219 --SVKVMRDPNGKSKGFGFVSYEKHEDANKAVEEMNGKEIS 257
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 130/283 (45%), Gaps = 31/283 (10%)
Query: 52 DPSTCRS----VYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRR 105
DPS +S V++ N+ + +L + FS+ G + CK++ + S Y F+H+ +
Sbjct: 90 DPSLRKSGVGNVFIKNLDKSIDNKVLYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQE 149
Query: 106 SAAMAILSLNGRHLFGQPIKVNWAYASGQREDTSG-----HFNIFVGDLSPEVTDATLFA 160
+A AI +NG L + + V + +RE G N+++ + EV D +L
Sbjct: 150 AADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKE 209
Query: 161 CFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATK 220
FS + +VM D G+S+GFGFVS+ +DA A+ ++ GK + + I A K
Sbjct: 210 LFSQFGKTLSVKVMRD-PNGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRAQK 268
Query: 221 GAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLH 280
++Q+ EL + +E + Q +Y+ NL + L
Sbjct: 269 KV----ERQA-------ELKRKFEQLKQERISRY------QGVNLYIKNLDDTIDDEKLR 311
Query: 281 RHFHSLGAGVIEEVRVQ--RDKGFGFVRYSTHAEAALAIQMGN 321
+ F G+ +V ++ R KGFGFV +S+ EA A+ N
Sbjct: 312 KEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMN 354
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 88/181 (48%), Gaps = 20/181 (11%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRK---DKSSYGFIHYFDRRSAAMAILSL 114
+VY+ N +V + L+E+FS G K++R +GF+ Y A A+ +
Sbjct: 192 NVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKHEDANKAVEEM 251
Query: 115 NGRHLFGQPIKVNWAYASGQR-------------EDTSGH--FNIFVGDLSPEVTDATLF 159
NG+ + G+ I V A +R E S + N+++ +L + D L
Sbjct: 252 NGKEISGKIIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLR 311
Query: 160 ACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT 219
FS + S + A+VM + GRS+GFGFV F + ++A A+ ++ G+ +GS+ + A
Sbjct: 312 KEFSPFGSITSAKVMLED--GRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQ 369
Query: 220 K 220
+
Sbjct: 370 R 370
Score = 38.5 bits (88), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRRSAAMAILSLN 115
++Y+ N+ + + L++ FS G + K++ +D S +GF+ + A A+ +N
Sbjct: 295 NLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMN 354
Query: 116 GRHLFGQPIKVNWAYASGQRE 136
GR + +P+ V A +R+
Sbjct: 355 GRIVGSKPLYVALAQRKEERK 375
>gi|401886540|gb|EJT50568.1| polyadenylate-binding protein [Trichosporon asahii var. asahii CBS
2479]
Length = 686
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 79/298 (26%), Positives = 132/298 (44%), Gaps = 45/298 (15%)
Query: 53 PSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIR----KDKSSYGFIHYFDRRSAA 108
P S+YVG + VTE +L E+F+ GPV ++ R + Y +++Y +
Sbjct: 53 PGNSASLYVGELDPSVTEAMLFEIFNMVGPVASIRVCRDAVTRRSLGYAYVNYLNAADGE 112
Query: 109 MAILSLNGRHLFGQPIKVNWAYASGQRE---DTSGHFNIFVGDLSPEVTDATLFACFSVY 165
A+ LN + +P ++ W+ QR+ +G NIF+ +L ++ + L F+ +
Sbjct: 113 RALEHLNYSLIKNRPCRIMWS----QRDPALRKTGQGNIFIKNLDDKIDNKALHDTFAAF 168
Query: 166 PSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNN 225
+ +V D+ G SRGF FV + + A +AI + G L +++ G++
Sbjct: 169 GNILSCKVATDE-NGNSRGFAFVHYETGEAADAAIKSVNGMLLNDKKVYV-------GHH 220
Query: 226 EDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHS 285
K+ +K VE E ++T +++ NL PE TQ DL F
Sbjct: 221 ISKKERQSK--VE------------------EQRAKFTNIFIKNLEPEFTQKDLEDMFKP 260
Query: 286 LGAGVIEEVRVQRD---KGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSK 340
G V + V D KGF FV Y+TH A A+ N + + GK++ K
Sbjct: 261 FGEIVSAALSVGEDGLSKGFAFVNYTTHDAAKKAVDELNDKE---INGKKLYVGRAQK 315
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 121/277 (43%), Gaps = 33/277 (11%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS---YGFIHYFDRRSAAMAILSL 114
++++ N+ ++ L + F++ G + CK+ + + + F+HY +A AI S+
Sbjct: 146 NIFIKNLDDKIDNKALHDTFAAFGNILSCKVATDENGNSRGFAFVHYETGEAADAAIKSV 205
Query: 115 NGRHLFGQPIKVNWAYASGQR----EDTSGHF-NIFVGDLSPEVTDATLFACFSVYPSCS 169
NG L + + V + +R E+ F NIF+ +L PE T L F +
Sbjct: 206 NGMLLNDKKVYVGHHISKKERQSKVEEQRAKFTNIFIKNLEPEFTQKDLEDMFKPFGEIV 265
Query: 170 DARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQ 229
A + + G S+GF FV++ A+ A+++L K + +++ A K A +E+ +
Sbjct: 266 SAALSVGE-DGLSKGFAFVNYTTHDAAKKAVDELNDKEINGKKLYVGRAQKRAERDEELR 324
Query: 230 SSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAG 289
+ +E N S G +YV N+ E L F AG
Sbjct: 325 RMHEERRLE--NESKTAG---------------VNLYVKNIDDEWDDDRLRSEFDF--AG 365
Query: 290 VIEEVRVQRD-----KGFGFVRYSTHAEAALAIQMGN 321
I +V RD +GFGFV +S EA A+Q N
Sbjct: 366 TITSAKVMRDDKGASRGFGFVCFSQPDEATRAVQEMN 402
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 87/181 (48%), Gaps = 19/181 (10%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKL-IRKDKSSYGF--IHYFDRRSAAMAILSL 114
++++ N+ + T+ L+++F G + L + +D S GF ++Y +A A+ L
Sbjct: 239 NIFIKNLEPEFTQKDLEDMFKPFGEIVSAALSVGEDGLSKGFAFVNYTTHDAAKKAVDEL 298
Query: 115 NGRHLFGQPIKVNWAYASGQR---------------EDTSGHFNIFVGDLSPEVTDATLF 159
N + + G+ + V A +R E + N++V ++ E D L
Sbjct: 299 NDKEINGKKLYVGRAQKRAERDEELRRMHEERRLENESKTAGVNLYVKNIDDEWDDDRLR 358
Query: 160 ACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT 219
+ F + + A+VM D K G SRGFGFV F +A A+ ++ GK +G++ + + A
Sbjct: 359 SEFDFAGTITSAKVMRDDK-GASRGFGFVCFSQPDEATRAVQEMNGKMIGTKPLYVSLAQ 417
Query: 220 K 220
K
Sbjct: 418 K 418
>gi|212274429|ref|NP_001130902.1| uncharacterized protein LOC100192006 [Zea mays]
gi|194690404|gb|ACF79286.1| unknown [Zea mays]
gi|413934109|gb|AFW68660.1| hypothetical protein ZEAMMB73_687460 [Zea mays]
Length = 357
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 65/200 (32%), Positives = 107/200 (53%), Gaps = 10/200 (5%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS-----YGFIHYFDRRSAAMAIL 112
+ YVGN+ QV+E LL E+F GPV + KD+ + YGF+ + A AI
Sbjct: 26 TTYVGNLDPQVSEELLWELFVQAGPVVNV-YVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
Query: 113 SLNGRHLFGQPIKVNWAYASGQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPS-CSDA 171
+LN L+G+PI+VN A + D N+F+G+L P+V + L+ FS + ++
Sbjct: 85 TLNMIKLYGKPIRVNKASQDKKSLDVGA--NLFIGNLDPDVDEKLLYDTFSAFGVIVTNP 142
Query: 172 RVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSS 231
++M D +TG SRGFGFVS+ + + + AI + + L +R I ++A K E + +
Sbjct: 143 KIMRDPETGNSRGFGFVSYESFESSDQAIEAMNNQHLCNRPITVSYAYKKDTKGE-RHGT 201
Query: 232 DAKSVVELTNGSSEDGKETT 251
A+ ++ N S+ + T
Sbjct: 202 PAERLLAANNPGSQKNRPHT 221
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 90/202 (44%), Gaps = 44/202 (21%)
Query: 145 FVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLT 204
+VG+L P+V++ L+ F + V D+ T +G+GFV FR+++DA AI L
Sbjct: 28 YVGNLDPQVSEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKTLN 87
Query: 205 GKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTT 264
L + IR N A+ +DK+S D +
Sbjct: 88 MIKLYGKPIRVNKAS------QDKKSLDVGA----------------------------N 113
Query: 265 VYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRD------KGFGFVRYSTHAEAALAIQ 318
+++GNL P+V + L+ F + G ++ ++ RD +GFGFV Y + + AI+
Sbjct: 114 LFIGNLDPDVDEKLLYDTFSAFGV-IVTNPKIMRDPETGNSRGFGFVSYESFESSDQAIE 172
Query: 319 MGNTTQSSYLFGKQMKCSWGSK 340
N + +L + + S+ K
Sbjct: 173 AMN---NQHLCNRPITVSYAYK 191
Score = 42.4 bits (98), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 46/86 (53%), Gaps = 11/86 (12%)
Query: 261 QYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDK------GFGFVRYSTHAEAA 314
Q T YVGNL P+V++ L F + AG + V V +D+ G+GFV + + +A
Sbjct: 23 QDATTYVGNLDPQVSEELLWELF--VQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDAD 80
Query: 315 LAIQMGNTTQSSYLFGKQMKCSWGSK 340
AI+ N + L+GK ++ + S+
Sbjct: 81 YAIKTLNMIK---LYGKPIRVNKASQ 103
>gi|366999420|ref|XP_003684446.1| hypothetical protein TPHA_0B03420 [Tetrapisispora phaffii CBS 4417]
gi|357522742|emb|CCE62012.1| hypothetical protein TPHA_0B03420 [Tetrapisispora phaffii CBS 4417]
Length = 579
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 132/283 (46%), Gaps = 46/283 (16%)
Query: 54 STCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIR----KDKSSYGFIHYFDRRSAAM 109
+T S+YVG + V+E LL ++FS GPV ++ R K Y ++++ D S
Sbjct: 47 TTSASLYVGELDPSVSEALLYDIFSPIGPVTSIRVCRDAITKTSLGYAYVNFNDHESGRT 106
Query: 110 AILSLNGRHLFGQPIKVNWAYASGQRE---DTSGHFNIFVGDLSPEVTDATLFACFSVYP 166
AI LN + G+P ++ W+ QR+ G NIF+ +L P++ + L FSV+
Sbjct: 107 AIEKLNYSPIKGKPCRIMWS----QRDPALRKKGAGNIFIKNLHPDIDNKALHDTFSVFG 162
Query: 167 SCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNE 226
+ ++ D+ TG+S+GFGFV F A A++ + G L R++
Sbjct: 163 NILSCKIATDE-TGKSKGFGFVHFEEDNAAVEAVDAINGMMLNGREVYV----------- 210
Query: 227 DKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSL 286
A+ V S+ +E+ E N +T VYV N+ + + + F
Sbjct: 211 ------AQHV-------SKKDRESKLEEVKAN---FTNVYVKNVDVDTPEDEFTALFSKY 254
Query: 287 GAGVIEEVRVQRD-----KGFGFVRYSTHAEAALAIQMGNTTQ 324
G I + +++D +GFGF+ + H +AA A++ N +
Sbjct: 255 GP--ITSIAMEKDSEGKFRGFGFINFENHDDAAKAVEELNDLE 295
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 120/288 (41%), Gaps = 37/288 (12%)
Query: 49 PGFDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKD---KSSYGFIHYFDRR 105
P ++++ N+H + L + FS G + CK+ + +GF+H+ +
Sbjct: 130 PALRKKGAGNIFIKNLHPDIDNKALHDTFSVFGNILSCKIATDETGKSKGFGFVHFEEDN 189
Query: 106 SAAMAILSLNGRHLFGQPIKVNWAYASGQRE----DTSGHF-NIFVGDLSPEVTDATLFA 160
+A A+ ++NG L G+ + V + RE + +F N++V ++ + + A
Sbjct: 190 AAVEAVDAINGMMLNGREVYVAQHVSKKDRESKLEEVKANFTNVYVKNVDVDTPEDEFTA 249
Query: 161 CFSVY-PSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT 219
FS Y P S A M G+ RGFGF++F N DA A+ +L +++ A
Sbjct: 250 LFSKYGPITSIA--MEKDSEGKFRGFGFINFENHDDAAKAVEELNDLEFKGQKLYVGRAQ 307
Query: 220 KGAGN-NEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLD 278
K E K+ +A + +L Q ++V NL +
Sbjct: 308 KKYERLQELKKQYEASRLEKLAKY------------------QGVNLFVKNLDDSIDDEK 349
Query: 279 LHRHFHSLGAGVIEEVRVQRD-----KGFGFVRYSTHAEAALAIQMGN 321
L F G+ I +V R+ K FGFV +ST EA AI N
Sbjct: 350 LEAEFAPFGS--ITSAKVMRNEEGKSKNFGFVCFSTPEEATKAITEKN 395
>gi|119627667|gb|EAX07262.1| poly(A) binding protein, cytoplasmic 4 (inducible form), isoform
CRA_b [Homo sapiens]
Length = 645
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 130/281 (46%), Gaps = 47/281 (16%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIR----KDKSSYGFIHYFDRRSAAMAILS 113
S+YVG++H+ VTE +L E FS GPV ++ R + Y ++++ A A+ +
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 114 LNGRHLFGQPIKVNWAYASGQREDT---SGHFNIFVGDLSPEVTDATLFACFSVYPSCSD 170
+N + G+PI++ W+ QR+ + SG N+F+ +L + + L+ FS + +
Sbjct: 72 MNFDVIKGKPIRIMWS----QRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 171 ARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQS 230
+V+ D+ S+G+ FV F Q+ A AI + G L R++ G + ++
Sbjct: 128 CKVVCDENG--SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFV-------GRFKSRKE 178
Query: 231 SDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGV 290
+A EL + E +T VY+ N EV L F G +
Sbjct: 179 REA----ELGAKAKE----------------FTNVYIKNFGEEVDDESLKELFSQFGKTL 218
Query: 291 IEEVRVQRD-----KGFGFVRYSTHAEAALAIQMGNTTQSS 326
V+V RD KGFGFV Y H +A A++ N + S
Sbjct: 219 --SVKVMRDPNGKSKGFGFVSYEKHEDANKAVEEMNGKEIS 257
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 129/283 (45%), Gaps = 31/283 (10%)
Query: 52 DPSTCRS----VYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRR 105
DPS +S V++ N+ + L + FS+ G + CK++ + S Y F+H+ +
Sbjct: 90 DPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQE 149
Query: 106 SAAMAILSLNGRHLFGQPIKVNWAYASGQREDTSG-----HFNIFVGDLSPEVTDATLFA 160
+A AI +NG L + + V + +RE G N+++ + EV D +L
Sbjct: 150 AADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKE 209
Query: 161 CFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATK 220
FS + +VM D G+S+GFGFVS+ +DA A+ ++ GK + + I A K
Sbjct: 210 LFSQFGKTLSVKVMRD-PNGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRAQK 268
Query: 221 GAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLH 280
++Q+ EL + +E + Q +Y+ NL + L
Sbjct: 269 KV----ERQA-------ELKRKFEQLKQERISRY------QGVNLYIKNLDDTIDDEKLR 311
Query: 281 RHFHSLGAGVIEEVRVQ--RDKGFGFVRYSTHAEAALAIQMGN 321
+ F G+ +V ++ R KGFGFV +S+ EA A+ N
Sbjct: 312 KEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMN 354
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 88/181 (48%), Gaps = 20/181 (11%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRK---DKSSYGFIHYFDRRSAAMAILSL 114
+VY+ N +V + L+E+FS G K++R +GF+ Y A A+ +
Sbjct: 192 NVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKHEDANKAVEEM 251
Query: 115 NGRHLFGQPIKVNWAYASGQR-------------EDTSGH--FNIFVGDLSPEVTDATLF 159
NG+ + G+ I V A +R E S + N+++ +L + D L
Sbjct: 252 NGKEISGKIIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLR 311
Query: 160 ACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT 219
FS + S + A+VM + GRS+GFGFV F + ++A A+ ++ G+ +GS+ + A
Sbjct: 312 KEFSPFGSITSAKVMLED--GRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQ 369
Query: 220 K 220
+
Sbjct: 370 R 370
Score = 38.9 bits (89), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRRSAAMAILSLN 115
++Y+ N+ + + L++ FS G + K++ +D S +GF+ + A A+ +N
Sbjct: 295 NLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMN 354
Query: 116 GRHLFGQPIKVNWAYASGQRE 136
GR + +P+ V A +R+
Sbjct: 355 GRIVGSKPLYVALAQRKEERK 375
>gi|410263252|gb|JAA19592.1| poly(A) binding protein, cytoplasmic 4 (inducible form) [Pan
troglodytes]
Length = 631
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 130/281 (46%), Gaps = 47/281 (16%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIR----KDKSSYGFIHYFDRRSAAMAILS 113
S+YVG++H+ VTE +L E FS GPV ++ R + Y ++++ A A+ +
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 114 LNGRHLFGQPIKVNWAYASGQREDT---SGHFNIFVGDLSPEVTDATLFACFSVYPSCSD 170
+N + G+PI++ W+ QR+ + SG N+F+ +L + + L+ FS + +
Sbjct: 72 MNFDVIKGKPIRIMWS----QRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 171 ARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQS 230
+V+ D+ S+G+ FV F Q+ A AI + G L R++ G + ++
Sbjct: 128 CKVVCDENG--SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFV-------GRFKSRKE 178
Query: 231 SDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGV 290
+A EL + E +T VY+ N EV L F G +
Sbjct: 179 REA----ELGAKAKE----------------FTNVYIKNFGEEVDDESLKELFSQFGKTL 218
Query: 291 IEEVRVQRD-----KGFGFVRYSTHAEAALAIQMGNTTQSS 326
V+V RD KGFGFV Y H +A A++ N + S
Sbjct: 219 --SVKVMRDPNGKSKGFGFVSYEKHEDANKAVEEMNGKEIS 257
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 129/283 (45%), Gaps = 31/283 (10%)
Query: 52 DPSTCRS----VYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRR 105
DPS +S V++ N+ + L + FS+ G + CK++ + S Y F+H+ +
Sbjct: 90 DPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQE 149
Query: 106 SAAMAILSLNGRHLFGQPIKVNWAYASGQREDTSG-----HFNIFVGDLSPEVTDATLFA 160
+A AI +NG L + + V + +RE G N+++ + EV D +L
Sbjct: 150 AADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKE 209
Query: 161 CFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATK 220
FS + +VM D G+S+GFGFVS+ +DA A+ ++ GK + + I A K
Sbjct: 210 LFSQFGKTLSVKVMRD-PNGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRAQK 268
Query: 221 GAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLH 280
++Q+ EL + +E + Q +Y+ NL + L
Sbjct: 269 KV----ERQA-------ELKRKFEQLKQERISRY------QGVNLYIKNLDDTIDDEKLR 311
Query: 281 RHFHSLGAGVIEEVRVQ--RDKGFGFVRYSTHAEAALAIQMGN 321
+ F G+ +V ++ R KGFGFV +S+ EA A+ N
Sbjct: 312 KEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMN 354
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 88/181 (48%), Gaps = 20/181 (11%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRK---DKSSYGFIHYFDRRSAAMAILSL 114
+VY+ N +V + L+E+FS G K++R +GF+ Y A A+ +
Sbjct: 192 NVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKHEDANKAVEEM 251
Query: 115 NGRHLFGQPIKVNWAYASGQR-------------EDTSGH--FNIFVGDLSPEVTDATLF 159
NG+ + G+ I V A +R E S + N+++ +L + D L
Sbjct: 252 NGKEISGKIIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLR 311
Query: 160 ACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT 219
FS + S + A+VM + GRS+GFGFV F + ++A A+ ++ G+ +GS+ + A
Sbjct: 312 KEFSPFGSITSAKVMLED--GRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQ 369
Query: 220 K 220
+
Sbjct: 370 R 370
Score = 38.9 bits (89), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRRSAAMAILSLN 115
++Y+ N+ + + L++ FS G + K++ +D S +GF+ + A A+ +N
Sbjct: 295 NLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMN 354
Query: 116 GRHLFGQPIKVNWAYASGQRE 136
GR + +P+ V A +R+
Sbjct: 355 GRIVGSKPLYVALAQRKEERK 375
>gi|410966844|ref|XP_003989937.1| PREDICTED: polyadenylate-binding protein 4 isoform 3 [Felis catus]
Length = 631
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 130/281 (46%), Gaps = 47/281 (16%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIR----KDKSSYGFIHYFDRRSAAMAILS 113
S+YVG++H+ VTE +L E FS GPV ++ R + Y ++++ A A+ +
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 114 LNGRHLFGQPIKVNWAYASGQREDT---SGHFNIFVGDLSPEVTDATLFACFSVYPSCSD 170
+N + G+PI++ W+ QR+ + SG N+F+ +L + + L+ FS + +
Sbjct: 72 MNFDVIKGKPIRIMWS----QRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 171 ARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQS 230
+V+ D+ S+G+ FV F Q+ A AI + G L R++ G + ++
Sbjct: 128 CKVVCDENG--SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFV-------GRFKSRKE 178
Query: 231 SDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGV 290
+A EL + E +T VY+ N EV L F G +
Sbjct: 179 REA----ELGAKAKE----------------FTNVYIKNFGEEVDDESLKELFSQFGKTL 218
Query: 291 IEEVRVQRD-----KGFGFVRYSTHAEAALAIQMGNTTQSS 326
V+V RD KGFGFV Y H +A A++ N + S
Sbjct: 219 --SVKVMRDPSGKSKGFGFVSYEKHEDANKAVEEMNGKEIS 257
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 130/283 (45%), Gaps = 31/283 (10%)
Query: 52 DPSTCRS----VYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRR 105
DPS +S V++ N+ + L + FS+ G + CK++ + S Y F+H+ +
Sbjct: 90 DPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQE 149
Query: 106 SAAMAILSLNGRHLFGQPIKVNWAYASGQREDTSG-----HFNIFVGDLSPEVTDATLFA 160
+A AI +NG L + + V + +RE G N+++ + EV D +L
Sbjct: 150 AADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKE 209
Query: 161 CFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATK 220
FS + +VM D +G+S+GFGFVS+ +DA A+ ++ GK + + I A K
Sbjct: 210 LFSQFGKTLSVKVMRD-PSGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKVIFVGRAQK 268
Query: 221 GAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLH 280
++Q+ EL + +E + Q +Y+ NL + L
Sbjct: 269 KV----ERQA-------ELKRKFEQLKQERISRY------QGVNLYIKNLDDTIDDEKLR 311
Query: 281 RHFHSLGAGVIEEVRVQ--RDKGFGFVRYSTHAEAALAIQMGN 321
+ F G+ +V ++ R KGFGFV +S+ EA A+ N
Sbjct: 312 KEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMN 354
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 88/181 (48%), Gaps = 20/181 (11%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRK---DKSSYGFIHYFDRRSAAMAILSL 114
+VY+ N +V + L+E+FS G K++R +GF+ Y A A+ +
Sbjct: 192 NVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGKSKGFGFVSYEKHEDANKAVEEM 251
Query: 115 NGRHLFGQPIKVNWAYASGQR-------------EDTSGH--FNIFVGDLSPEVTDATLF 159
NG+ + G+ I V A +R E S + N+++ +L + D L
Sbjct: 252 NGKEISGKVIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLR 311
Query: 160 ACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT 219
FS + S + A+VM + GRS+GFGFV F + ++A A+ ++ G+ +GS+ + A
Sbjct: 312 KEFSPFGSITSAKVMLED--GRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQ 369
Query: 220 K 220
+
Sbjct: 370 R 370
Score = 38.9 bits (89), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRRSAAMAILSLN 115
++Y+ N+ + + L++ FS G + K++ +D S +GF+ + A A+ +N
Sbjct: 295 NLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMN 354
Query: 116 GRHLFGQPIKVNWAYASGQRE 136
GR + +P+ V A +R+
Sbjct: 355 GRIVGSKPLYVALAQRKEERK 375
>gi|344287655|ref|XP_003415568.1| PREDICTED: polyadenylate-binding protein 4 isoform 3 [Loxodonta
africana]
Length = 631
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 130/281 (46%), Gaps = 47/281 (16%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIR----KDKSSYGFIHYFDRRSAAMAILS 113
S+YVG++H+ VTE +L E FS GPV ++ R + Y ++++ A A+ +
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 114 LNGRHLFGQPIKVNWAYASGQREDT---SGHFNIFVGDLSPEVTDATLFACFSVYPSCSD 170
+N + G+PI++ W+ QR+ + SG N+F+ +L + + L+ FS + +
Sbjct: 72 MNFDVIKGKPIRIMWS----QRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 171 ARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQS 230
+V+ D+ S+G+ FV F Q+ A AI + G L R++ G + ++
Sbjct: 128 CKVVCDENG--SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFV-------GRFKSRKE 178
Query: 231 SDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGV 290
+A EL + E +T VY+ N EV L F G +
Sbjct: 179 REA----ELGAKAKE----------------FTNVYIKNFGEEVDDESLKELFSQFGKTL 218
Query: 291 IEEVRVQRD-----KGFGFVRYSTHAEAALAIQMGNTTQSS 326
V+V RD KGFGFV Y H +A A++ N + S
Sbjct: 219 --SVKVMRDPSGKSKGFGFVSYEKHEDANKAVEEMNGKEIS 257
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 130/283 (45%), Gaps = 31/283 (10%)
Query: 52 DPSTCRS----VYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRR 105
DPS +S V++ N+ + L + FS+ G + CK++ + S Y F+H+ +
Sbjct: 90 DPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQE 149
Query: 106 SAAMAILSLNGRHLFGQPIKVNWAYASGQREDTSG-----HFNIFVGDLSPEVTDATLFA 160
+A AI +NG L + + V + +RE G N+++ + EV D +L
Sbjct: 150 AADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKE 209
Query: 161 CFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATK 220
FS + +VM D +G+S+GFGFVS+ +DA A+ ++ GK + + I A K
Sbjct: 210 LFSQFGKTLSVKVMRD-PSGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKVIFVGRAQK 268
Query: 221 GAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLH 280
++Q+ EL + +E + Q +Y+ NL + L
Sbjct: 269 KV----ERQA-------ELKRKFEQLKQERISRY------QGVNLYIKNLDDTIDDEKLR 311
Query: 281 RHFHSLGAGVIEEVRVQ--RDKGFGFVRYSTHAEAALAIQMGN 321
+ F G+ +V ++ R KGFGFV +S+ EA A+ N
Sbjct: 312 KEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMN 354
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 88/181 (48%), Gaps = 20/181 (11%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRK---DKSSYGFIHYFDRRSAAMAILSL 114
+VY+ N +V + L+E+FS G K++R +GF+ Y A A+ +
Sbjct: 192 NVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGKSKGFGFVSYEKHEDANKAVEEM 251
Query: 115 NGRHLFGQPIKVNWAYASGQR-------------EDTSGH--FNIFVGDLSPEVTDATLF 159
NG+ + G+ I V A +R E S + N+++ +L + D L
Sbjct: 252 NGKEISGKVIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLR 311
Query: 160 ACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT 219
FS + S + A+VM + GRS+GFGFV F + ++A A+ ++ G+ +GS+ + A
Sbjct: 312 KEFSPFGSITSAKVMLED--GRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQ 369
Query: 220 K 220
+
Sbjct: 370 R 370
Score = 38.9 bits (89), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRRSAAMAILSLN 115
++Y+ N+ + + L++ FS G + K++ +D S +GF+ + A A+ +N
Sbjct: 295 NLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMN 354
Query: 116 GRHLFGQPIKVNWAYASGQRE 136
GR + +P+ V A +R+
Sbjct: 355 GRIVGSKPLYVALAQRKEERK 375
>gi|110681486|emb|CAL25353.1| ACBF-like dna binding protein [Platanus x acerifolia]
Length = 216
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 62/172 (36%), Positives = 99/172 (57%), Gaps = 9/172 (5%)
Query: 57 RSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS----YGFIHYFDRRSAAMAIL 112
++++VG++H + L F+ TG V K+IR ++ YGF+ +F R +A +
Sbjct: 29 KTIWVGDLHYWMDGNYLNNCFAHTGEVISIKVIRNKQTGQSEGYGFVEFFSREAAEKVLQ 88
Query: 113 SLNGRHL--FGQPIKVNWA-YASGQREDTSG-HFNIFVGDLSPEVTDATLFACF-SVYPS 167
+ NG + QP ++NWA ++ G+R +G +IFVGDLS +VTD L F S YPS
Sbjct: 89 NYNGTAMPNTEQPFRLNWASFSMGERRSEAGSDHSIFVGDLSSDVTDTLLQETFASRYPS 148
Query: 168 CSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT 219
A+V+ D TGRS+G+GFV F + + AI+++ G + +R +R AT
Sbjct: 149 VKGAKVVIDANTGRSKGYGFVRFGDDNERSRAISEMNGAYCSNRPMRVGVAT 200
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 79/181 (43%), Gaps = 37/181 (20%)
Query: 144 IFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDL 203
I+VGDL + L CF+ +V+ +++TG+S G+GFV F +++ A+ + +
Sbjct: 31 IWVGDLHYWMDGNYLNNCFAHTGEVISIKVIRNKQTGQSEGYGFVEFFSREAAEKVLQNY 90
Query: 204 TGKWLGSRQ--IRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQ 261
G + + + R NWA+ G + SD
Sbjct: 91 NGTAMPNTEQPFRLNWASFSMGERRSEAGSDH---------------------------- 122
Query: 262 YTTVYVGNLAPEVTQLDLHRHFHSL-----GAGVIEEVRVQRDKGFGFVRYSTHAEAALA 316
+++VG+L+ +VT L F S GA V+ + R KG+GFVR+ E + A
Sbjct: 123 --SIFVGDLSSDVTDTLLQETFASRYPSVKGAKVVIDANTGRSKGYGFVRFGDDNERSRA 180
Query: 317 I 317
I
Sbjct: 181 I 181
>gi|402854031|ref|XP_003891684.1| PREDICTED: polyadenylate-binding protein 4 isoform 3 [Papio anubis]
Length = 631
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 130/281 (46%), Gaps = 47/281 (16%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIR----KDKSSYGFIHYFDRRSAAMAILS 113
S+YVG++H+ VTE +L E FS GPV ++ R + Y ++++ A A+ +
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 114 LNGRHLFGQPIKVNWAYASGQREDT---SGHFNIFVGDLSPEVTDATLFACFSVYPSCSD 170
+N + G+PI++ W+ QR+ + SG N+F+ +L + + L+ FS + +
Sbjct: 72 MNFDVIKGKPIRIMWS----QRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 171 ARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQS 230
+V+ D+ S+G+ FV F Q+ A AI + G L R++ G + ++
Sbjct: 128 CKVVCDENG--SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFV-------GRFKSRKE 178
Query: 231 SDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGV 290
+A EL + E +T VY+ N EV L F G +
Sbjct: 179 REA----ELGAKAKE----------------FTNVYIKNFGEEVDDESLKELFSQFGKTL 218
Query: 291 IEEVRVQRD-----KGFGFVRYSTHAEAALAIQMGNTTQSS 326
V+V RD KGFGFV Y H +A A++ N + S
Sbjct: 219 --SVKVMRDPSGKSKGFGFVSYEKHEDANKAVEEMNGKEIS 257
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 130/283 (45%), Gaps = 31/283 (10%)
Query: 52 DPSTCRS----VYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRR 105
DPS +S V++ N+ + L + FS+ G + CK++ + S Y F+H+ +
Sbjct: 90 DPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQE 149
Query: 106 SAAMAILSLNGRHLFGQPIKVNWAYASGQREDTSG-----HFNIFVGDLSPEVTDATLFA 160
+A AI +NG L + + V + +RE G N+++ + EV D +L
Sbjct: 150 AADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKE 209
Query: 161 CFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATK 220
FS + +VM D +G+S+GFGFVS+ +DA A+ ++ GK + + I A K
Sbjct: 210 LFSQFGKTLSVKVMRD-PSGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRAQK 268
Query: 221 GAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLH 280
++Q+ EL + +E + Q +Y+ NL + L
Sbjct: 269 KV----ERQA-------ELKRKFEQLKQERISRY------QGVNLYIKNLDDTIDDEKLR 311
Query: 281 RHFHSLGAGVIEEVRVQ--RDKGFGFVRYSTHAEAALAIQMGN 321
+ F G+ +V ++ R KGFGFV +S+ EA A+ N
Sbjct: 312 KEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMN 354
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 88/181 (48%), Gaps = 20/181 (11%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRK---DKSSYGFIHYFDRRSAAMAILSL 114
+VY+ N +V + L+E+FS G K++R +GF+ Y A A+ +
Sbjct: 192 NVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGKSKGFGFVSYEKHEDANKAVEEM 251
Query: 115 NGRHLFGQPIKVNWAYASGQR-------------EDTSGH--FNIFVGDLSPEVTDATLF 159
NG+ + G+ I V A +R E S + N+++ +L + D L
Sbjct: 252 NGKEISGKIIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLR 311
Query: 160 ACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT 219
FS + S + A+VM + GRS+GFGFV F + ++A A+ ++ G+ +GS+ + A
Sbjct: 312 KEFSPFGSITSAKVMLED--GRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQ 369
Query: 220 K 220
+
Sbjct: 370 R 370
Score = 38.9 bits (89), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRRSAAMAILSLN 115
++Y+ N+ + + L++ FS G + K++ +D S +GF+ + A A+ +N
Sbjct: 295 NLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMN 354
Query: 116 GRHLFGQPIKVNWAYASGQRE 136
GR + +P+ V A +R+
Sbjct: 355 GRIVGSKPLYVALAQRKEERK 375
>gi|4504715|ref|NP_003810.1| polyadenylate-binding protein 4 isoform 2 [Homo sapiens]
gi|332808510|ref|XP_003308042.1| PREDICTED: polyadenylate-binding protein 4 [Pan troglodytes]
gi|395730716|ref|XP_003775777.1| PREDICTED: polyadenylate-binding protein 4 isoform 2 [Pongo abelii]
gi|397488844|ref|XP_003815453.1| PREDICTED: polyadenylate-binding protein 4 isoform 2 [Pan paniscus]
gi|426329066|ref|XP_004025565.1| PREDICTED: polyadenylate-binding protein 4 isoform 3 [Gorilla
gorilla gorilla]
gi|12229875|sp|Q13310.1|PABP4_HUMAN RecName: Full=Polyadenylate-binding protein 4; Short=PABP-4;
Short=Poly(A)-binding protein 4; AltName:
Full=Activated-platelet protein 1; Short=APP-1; AltName:
Full=Inducible poly(A)-binding protein; Short=iPABP
gi|1163177|gb|AAC50350.1| inducible poly(A)-binding protein [Homo sapiens]
gi|2801403|gb|AAB97309.1| polyadenylate binding protein [Homo sapiens]
gi|119627669|gb|EAX07264.1| poly(A) binding protein, cytoplasmic 4 (inducible form), isoform
CRA_d [Homo sapiens]
gi|410227600|gb|JAA11019.1| poly(A) binding protein, cytoplasmic 4 (inducible form) [Pan
troglodytes]
gi|1585757|prf||2201474A inducible poly(A)-binding protein
Length = 644
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 130/281 (46%), Gaps = 47/281 (16%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIR----KDKSSYGFIHYFDRRSAAMAILS 113
S+YVG++H+ VTE +L E FS GPV ++ R + Y ++++ A A+ +
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 114 LNGRHLFGQPIKVNWAYASGQREDT---SGHFNIFVGDLSPEVTDATLFACFSVYPSCSD 170
+N + G+PI++ W+ QR+ + SG N+F+ +L + + L+ FS + +
Sbjct: 72 MNFDVIKGKPIRIMWS----QRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 171 ARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQS 230
+V+ D+ S+G+ FV F Q+ A AI + G L R++ G + ++
Sbjct: 128 CKVVCDENG--SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFV-------GRFKSRKE 178
Query: 231 SDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGV 290
+A EL + E +T VY+ N EV L F G +
Sbjct: 179 REA----ELGAKAKE----------------FTNVYIKNFGEEVDDESLKELFSQFGKTL 218
Query: 291 IEEVRVQRD-----KGFGFVRYSTHAEAALAIQMGNTTQSS 326
V+V RD KGFGFV Y H +A A++ N + S
Sbjct: 219 --SVKVMRDPNGKSKGFGFVSYEKHEDANKAVEEMNGKEIS 257
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 129/283 (45%), Gaps = 31/283 (10%)
Query: 52 DPSTCRS----VYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRR 105
DPS +S V++ N+ + L + FS+ G + CK++ + S Y F+H+ +
Sbjct: 90 DPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQE 149
Query: 106 SAAMAILSLNGRHLFGQPIKVNWAYASGQREDTSG-----HFNIFVGDLSPEVTDATLFA 160
+A AI +NG L + + V + +RE G N+++ + EV D +L
Sbjct: 150 AADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKE 209
Query: 161 CFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATK 220
FS + +VM D G+S+GFGFVS+ +DA A+ ++ GK + + I A K
Sbjct: 210 LFSQFGKTLSVKVMRD-PNGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRAQK 268
Query: 221 GAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLH 280
++Q+ EL + +E + Q +Y+ NL + L
Sbjct: 269 KV----ERQA-------ELKRKFEQLKQERISRY------QGVNLYIKNLDDTIDDEKLR 311
Query: 281 RHFHSLGAGVIEEVRVQ--RDKGFGFVRYSTHAEAALAIQMGN 321
+ F G+ +V ++ R KGFGFV +S+ EA A+ N
Sbjct: 312 KEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMN 354
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 88/181 (48%), Gaps = 20/181 (11%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRK---DKSSYGFIHYFDRRSAAMAILSL 114
+VY+ N +V + L+E+FS G K++R +GF+ Y A A+ +
Sbjct: 192 NVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKHEDANKAVEEM 251
Query: 115 NGRHLFGQPIKVNWAYASGQR-------------EDTSGH--FNIFVGDLSPEVTDATLF 159
NG+ + G+ I V A +R E S + N+++ +L + D L
Sbjct: 252 NGKEISGKIIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLR 311
Query: 160 ACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT 219
FS + S + A+VM + GRS+GFGFV F + ++A A+ ++ G+ +GS+ + A
Sbjct: 312 KEFSPFGSITSAKVMLED--GRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQ 369
Query: 220 K 220
+
Sbjct: 370 R 370
Score = 38.9 bits (89), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRRSAAMAILSLN 115
++Y+ N+ + + L++ FS G + K++ +D S +GF+ + A A+ +N
Sbjct: 295 NLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMN 354
Query: 116 GRHLFGQPIKVNWAYASGQRE 136
GR + +P+ V A +R+
Sbjct: 355 GRIVGSKPLYVALAQRKEERK 375
>gi|73976763|ref|XP_857000.1| PREDICTED: polyadenylate-binding protein 4 isoform 2 [Canis lupus
familiaris]
Length = 644
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 130/281 (46%), Gaps = 47/281 (16%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIR----KDKSSYGFIHYFDRRSAAMAILS 113
S+YVG++H+ VTE +L E FS GPV ++ R + Y ++++ A A+ +
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 114 LNGRHLFGQPIKVNWAYASGQREDT---SGHFNIFVGDLSPEVTDATLFACFSVYPSCSD 170
+N + G+PI++ W+ QR+ + SG N+F+ +L + + L+ FS + +
Sbjct: 72 MNFDVIKGKPIRIMWS----QRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 171 ARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQS 230
+V+ D+ S+G+ FV F Q+ A AI + G L R++ G + ++
Sbjct: 128 CKVVCDENG--SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFV-------GRFKSRKE 178
Query: 231 SDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGV 290
+A EL + E +T VY+ N EV L F G +
Sbjct: 179 REA----ELGAKAKE----------------FTNVYIKNFGEEVDDESLKELFSQFGKTL 218
Query: 291 IEEVRVQRD-----KGFGFVRYSTHAEAALAIQMGNTTQSS 326
V+V RD KGFGFV Y H +A A++ N + S
Sbjct: 219 --SVKVMRDPSGKSKGFGFVSYEKHEDANKAVEEMNGKEIS 257
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 130/283 (45%), Gaps = 31/283 (10%)
Query: 52 DPSTCRS----VYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRR 105
DPS +S V++ N+ + L + FS+ G + CK++ + S Y F+H+ +
Sbjct: 90 DPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQE 149
Query: 106 SAAMAILSLNGRHLFGQPIKVNWAYASGQREDTSG-----HFNIFVGDLSPEVTDATLFA 160
+A AI +NG L + + V + +RE G N+++ + EV D +L
Sbjct: 150 AADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKE 209
Query: 161 CFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATK 220
FS + +VM D +G+S+GFGFVS+ +DA A+ ++ GK + + I A K
Sbjct: 210 LFSQFGKTLSVKVMRD-PSGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKVIFVGRAQK 268
Query: 221 GAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLH 280
++Q+ EL + +E + Q +Y+ NL + L
Sbjct: 269 KV----ERQA-------ELKRKFEQLKQERISRY------QGVNLYIKNLDDTIDDEKLR 311
Query: 281 RHFHSLGAGVIEEVRVQ--RDKGFGFVRYSTHAEAALAIQMGN 321
+ F G+ +V ++ R KGFGFV +S+ EA A+ N
Sbjct: 312 KEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMN 354
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 88/181 (48%), Gaps = 20/181 (11%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRK---DKSSYGFIHYFDRRSAAMAILSL 114
+VY+ N +V + L+E+FS G K++R +GF+ Y A A+ +
Sbjct: 192 NVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGKSKGFGFVSYEKHEDANKAVEEM 251
Query: 115 NGRHLFGQPIKVNWAYASGQR-------------EDTSGH--FNIFVGDLSPEVTDATLF 159
NG+ + G+ I V A +R E S + N+++ +L + D L
Sbjct: 252 NGKEISGKVIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLR 311
Query: 160 ACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT 219
FS + S + A+VM + GRS+GFGFV F + ++A A+ ++ G+ +GS+ + A
Sbjct: 312 KEFSPFGSITSAKVMLED--GRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQ 369
Query: 220 K 220
+
Sbjct: 370 R 370
Score = 38.9 bits (89), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRRSAAMAILSLN 115
++Y+ N+ + + L++ FS G + K++ +D S +GF+ + A A+ +N
Sbjct: 295 NLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMN 354
Query: 116 GRHLFGQPIKVNWAYASGQRE 136
GR + +P+ V A +R+
Sbjct: 355 GRIVGSKPLYVALAQRKEERK 375
>gi|395853068|ref|XP_003799042.1| PREDICTED: polyadenylate-binding protein 4 isoform 1 [Otolemur
garnettii]
Length = 662
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 130/281 (46%), Gaps = 47/281 (16%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIR----KDKSSYGFIHYFDRRSAAMAILS 113
S+YVG++H+ VTE +L E FS GPV ++ R + Y ++++ A A+ +
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 114 LNGRHLFGQPIKVNWAYASGQREDT---SGHFNIFVGDLSPEVTDATLFACFSVYPSCSD 170
+N + G+PI++ W+ QR+ + SG N+F+ +L + + L+ FS + +
Sbjct: 72 MNFDVIKGKPIRIMWS----QRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 171 ARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQS 230
+V+ D+ S+G+ FV F Q+ A AI + G L R++ G + ++
Sbjct: 128 CKVVCDENG--SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFV-------GRFKSRKE 178
Query: 231 SDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGV 290
+A EL + E +T VY+ N EV L F G +
Sbjct: 179 REA----ELGAKAKE----------------FTNVYIKNFGEEVDDESLKELFSQFGKTL 218
Query: 291 IEEVRVQRD-----KGFGFVRYSTHAEAALAIQMGNTTQSS 326
V+V RD KGFGFV Y H +A A++ N + S
Sbjct: 219 --SVKVMRDPSGKSKGFGFVSYEKHEDANKAVEEMNGKEIS 257
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 130/283 (45%), Gaps = 31/283 (10%)
Query: 52 DPSTCRS----VYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRR 105
DPS +S V++ N+ + L + FS+ G + CK++ + S Y F+H+ +
Sbjct: 90 DPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQE 149
Query: 106 SAAMAILSLNGRHLFGQPIKVNWAYASGQREDTSG-----HFNIFVGDLSPEVTDATLFA 160
+A AI +NG L + + V + +RE G N+++ + EV D +L
Sbjct: 150 AADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKE 209
Query: 161 CFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATK 220
FS + +VM D +G+S+GFGFVS+ +DA A+ ++ GK + + I A K
Sbjct: 210 LFSQFGKTLSVKVMRD-PSGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKVIFVGRAQK 268
Query: 221 GAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLH 280
++Q+ EL + +E + Q +Y+ NL + L
Sbjct: 269 KV----ERQA-------ELKRKFEQLKQERISRY------QGVNLYIKNLDDTIDDEKLR 311
Query: 281 RHFHSLGAGVIEEVRVQ--RDKGFGFVRYSTHAEAALAIQMGN 321
+ F G+ +V ++ R KGFGFV +S+ EA A+ N
Sbjct: 312 KEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMN 354
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 88/181 (48%), Gaps = 20/181 (11%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRK---DKSSYGFIHYFDRRSAAMAILSL 114
+VY+ N +V + L+E+FS G K++R +GF+ Y A A+ +
Sbjct: 192 NVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGKSKGFGFVSYEKHEDANKAVEEM 251
Query: 115 NGRHLFGQPIKVNWAYASGQR-------------EDTSGH--FNIFVGDLSPEVTDATLF 159
NG+ + G+ I V A +R E S + N+++ +L + D L
Sbjct: 252 NGKEISGKVIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLR 311
Query: 160 ACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT 219
FS + S + A+VM + GRS+GFGFV F + ++A A+ ++ G+ +GS+ + A
Sbjct: 312 KEFSPFGSITSAKVMLED--GRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQ 369
Query: 220 K 220
+
Sbjct: 370 R 370
Score = 38.9 bits (89), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRRSAAMAILSLN 115
++Y+ N+ + + L++ FS G + K++ +D S +GF+ + A A+ +N
Sbjct: 295 NLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMN 354
Query: 116 GRHLFGQPIKVNWAYASGQRE 136
GR + +P+ V A +R+
Sbjct: 355 GRIVGSKPLYVALAQRKEERK 375
>gi|338721949|ref|XP_003364451.1| PREDICTED: polyadenylate-binding protein 4 isoform 2 [Equus
caballus]
Length = 660
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 130/281 (46%), Gaps = 47/281 (16%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIR----KDKSSYGFIHYFDRRSAAMAILS 113
S+YVG++H+ VTE +L E FS GPV ++ R + Y ++++ A A+ +
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 114 LNGRHLFGQPIKVNWAYASGQREDT---SGHFNIFVGDLSPEVTDATLFACFSVYPSCSD 170
+N + G+PI++ W+ QR+ + SG N+F+ +L + + L+ FS + +
Sbjct: 72 MNFDVIKGKPIRIMWS----QRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 171 ARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQS 230
+V+ D+ S+G+ FV F Q+ A AI + G L R++ G + ++
Sbjct: 128 CKVVCDENG--SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFV-------GRFKSRKE 178
Query: 231 SDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGV 290
+A EL + E +T VY+ N EV L F G +
Sbjct: 179 REA----ELGAKAKE----------------FTNVYIKNFGEEVDDESLKELFSQFGKTL 218
Query: 291 IEEVRVQRD-----KGFGFVRYSTHAEAALAIQMGNTTQSS 326
V+V RD KGFGFV Y H +A A++ N + S
Sbjct: 219 --SVKVMRDPSGKSKGFGFVSYEKHEDANKAVEEMNGKEIS 257
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 130/283 (45%), Gaps = 31/283 (10%)
Query: 52 DPSTCRS----VYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRR 105
DPS +S V++ N+ + L + FS+ G + CK++ + S Y F+H+ +
Sbjct: 90 DPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQE 149
Query: 106 SAAMAILSLNGRHLFGQPIKVNWAYASGQREDTSG-----HFNIFVGDLSPEVTDATLFA 160
+A AI +NG L + + V + +RE G N+++ + EV D +L
Sbjct: 150 AADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKE 209
Query: 161 CFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATK 220
FS + +VM D +G+S+GFGFVS+ +DA A+ ++ GK + + I A K
Sbjct: 210 LFSQFGKTLSVKVMRD-PSGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKVIFVGRAQK 268
Query: 221 GAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLH 280
++Q+ EL + +E + Q +Y+ NL + L
Sbjct: 269 KV----ERQA-------ELKRKFEQLKQERISRY------QGVNLYIKNLDDTIDDEKLR 311
Query: 281 RHFHSLGAGVIEEVRVQ--RDKGFGFVRYSTHAEAALAIQMGN 321
+ F G+ +V ++ R KGFGFV +S+ EA A+ N
Sbjct: 312 KEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMN 354
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 88/181 (48%), Gaps = 20/181 (11%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRK---DKSSYGFIHYFDRRSAAMAILSL 114
+VY+ N +V + L+E+FS G K++R +GF+ Y A A+ +
Sbjct: 192 NVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGKSKGFGFVSYEKHEDANKAVEEM 251
Query: 115 NGRHLFGQPIKVNWAYASGQR-------------EDTSGH--FNIFVGDLSPEVTDATLF 159
NG+ + G+ I V A +R E S + N+++ +L + D L
Sbjct: 252 NGKEISGKVIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLR 311
Query: 160 ACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT 219
FS + S + A+VM + GRS+GFGFV F + ++A A+ ++ G+ +GS+ + A
Sbjct: 312 KEFSPFGSITSAKVMLED--GRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQ 369
Query: 220 K 220
+
Sbjct: 370 R 370
Score = 38.9 bits (89), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRRSAAMAILSLN 115
++Y+ N+ + + L++ FS G + K++ +D S +GF+ + A A+ +N
Sbjct: 295 NLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMN 354
Query: 116 GRHLFGQPIKVNWAYASGQRE 136
GR + +P+ V A +R+
Sbjct: 355 GRIVGSKPLYVALAQRKEERK 375
>gi|344287651|ref|XP_003415566.1| PREDICTED: polyadenylate-binding protein 4 isoform 1 [Loxodonta
africana]
Length = 644
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 130/281 (46%), Gaps = 47/281 (16%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIR----KDKSSYGFIHYFDRRSAAMAILS 113
S+YVG++H+ VTE +L E FS GPV ++ R + Y ++++ A A+ +
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 114 LNGRHLFGQPIKVNWAYASGQREDT---SGHFNIFVGDLSPEVTDATLFACFSVYPSCSD 170
+N + G+PI++ W+ QR+ + SG N+F+ +L + + L+ FS + +
Sbjct: 72 MNFDVIKGKPIRIMWS----QRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 171 ARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQS 230
+V+ D+ S+G+ FV F Q+ A AI + G L R++ G + ++
Sbjct: 128 CKVVCDENG--SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFV-------GRFKSRKE 178
Query: 231 SDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGV 290
+A EL + E +T VY+ N EV L F G +
Sbjct: 179 REA----ELGAKAKE----------------FTNVYIKNFGEEVDDESLKELFSQFGKTL 218
Query: 291 IEEVRVQRD-----KGFGFVRYSTHAEAALAIQMGNTTQSS 326
V+V RD KGFGFV Y H +A A++ N + S
Sbjct: 219 --SVKVMRDPSGKSKGFGFVSYEKHEDANKAVEEMNGKEIS 257
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 130/283 (45%), Gaps = 31/283 (10%)
Query: 52 DPSTCRS----VYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRR 105
DPS +S V++ N+ + L + FS+ G + CK++ + S Y F+H+ +
Sbjct: 90 DPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQE 149
Query: 106 SAAMAILSLNGRHLFGQPIKVNWAYASGQREDTSG-----HFNIFVGDLSPEVTDATLFA 160
+A AI +NG L + + V + +RE G N+++ + EV D +L
Sbjct: 150 AADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKE 209
Query: 161 CFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATK 220
FS + +VM D +G+S+GFGFVS+ +DA A+ ++ GK + + I A K
Sbjct: 210 LFSQFGKTLSVKVMRD-PSGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKVIFVGRAQK 268
Query: 221 GAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLH 280
++Q+ EL + +E + Q +Y+ NL + L
Sbjct: 269 KV----ERQA-------ELKRKFEQLKQERISRY------QGVNLYIKNLDDTIDDEKLR 311
Query: 281 RHFHSLGAGVIEEVRVQ--RDKGFGFVRYSTHAEAALAIQMGN 321
+ F G+ +V ++ R KGFGFV +S+ EA A+ N
Sbjct: 312 KEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMN 354
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 88/181 (48%), Gaps = 20/181 (11%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRK---DKSSYGFIHYFDRRSAAMAILSL 114
+VY+ N +V + L+E+FS G K++R +GF+ Y A A+ +
Sbjct: 192 NVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGKSKGFGFVSYEKHEDANKAVEEM 251
Query: 115 NGRHLFGQPIKVNWAYASGQR-------------EDTSGH--FNIFVGDLSPEVTDATLF 159
NG+ + G+ I V A +R E S + N+++ +L + D L
Sbjct: 252 NGKEISGKVIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLR 311
Query: 160 ACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT 219
FS + S + A+VM + GRS+GFGFV F + ++A A+ ++ G+ +GS+ + A
Sbjct: 312 KEFSPFGSITSAKVMLED--GRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQ 369
Query: 220 K 220
+
Sbjct: 370 R 370
Score = 38.9 bits (89), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRRSAAMAILSLN 115
++Y+ N+ + + L++ FS G + K++ +D S +GF+ + A A+ +N
Sbjct: 295 NLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMN 354
Query: 116 GRHLFGQPIKVNWAYASGQRE 136
GR + +P+ V A +R+
Sbjct: 355 GRIVGSKPLYVALAQRKEERK 375
>gi|119627670|gb|EAX07265.1| poly(A) binding protein, cytoplasmic 4 (inducible form), isoform
CRA_e [Homo sapiens]
Length = 615
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 130/281 (46%), Gaps = 47/281 (16%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIR----KDKSSYGFIHYFDRRSAAMAILS 113
S+YVG++H+ VTE +L E FS GPV ++ R + Y ++++ A A+ +
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 114 LNGRHLFGQPIKVNWAYASGQREDT---SGHFNIFVGDLSPEVTDATLFACFSVYPSCSD 170
+N + G+PI++ W+ QR+ + SG N+F+ +L + + L+ FS + +
Sbjct: 72 MNFDVIKGKPIRIMWS----QRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 171 ARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQS 230
+V+ D+ S+G+ FV F Q+ A AI + G L R++ G + ++
Sbjct: 128 CKVVCDENG--SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFV-------GRFKSRKE 178
Query: 231 SDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGV 290
+A EL + E +T VY+ N EV L F G +
Sbjct: 179 REA----ELGAKAKE----------------FTNVYIKNFGEEVDDESLKELFSQFGKTL 218
Query: 291 IEEVRVQRD-----KGFGFVRYSTHAEAALAIQMGNTTQSS 326
V+V RD KGFGFV Y H +A A++ N + S
Sbjct: 219 --SVKVMRDPNGKSKGFGFVSYEKHEDANKAVEEMNGKEIS 257
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 129/283 (45%), Gaps = 31/283 (10%)
Query: 52 DPSTCRS----VYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRR 105
DPS +S V++ N+ + L + FS+ G + CK++ + S Y F+H+ +
Sbjct: 90 DPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQE 149
Query: 106 SAAMAILSLNGRHLFGQPIKVNWAYASGQREDTSG-----HFNIFVGDLSPEVTDATLFA 160
+A AI +NG L + + V + +RE G N+++ + EV D +L
Sbjct: 150 AADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKE 209
Query: 161 CFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATK 220
FS + +VM D G+S+GFGFVS+ +DA A+ ++ GK + + I A K
Sbjct: 210 LFSQFGKTLSVKVMRD-PNGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRAQK 268
Query: 221 GAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLH 280
++Q+ EL + +E + Q +Y+ NL + L
Sbjct: 269 KV----ERQA-------ELKRKFEQLKQERISRY------QGVNLYIKNLDDTIDDEKLR 311
Query: 281 RHFHSLGAGVIEEVRVQ--RDKGFGFVRYSTHAEAALAIQMGN 321
+ F G+ +V ++ R KGFGFV +S+ EA A+ N
Sbjct: 312 KEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMN 354
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 88/181 (48%), Gaps = 20/181 (11%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRK---DKSSYGFIHYFDRRSAAMAILSL 114
+VY+ N +V + L+E+FS G K++R +GF+ Y A A+ +
Sbjct: 192 NVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKHEDANKAVEEM 251
Query: 115 NGRHLFGQPIKVNWAYASGQR-------------EDTSGH--FNIFVGDLSPEVTDATLF 159
NG+ + G+ I V A +R E S + N+++ +L + D L
Sbjct: 252 NGKEISGKIIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLR 311
Query: 160 ACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT 219
FS + S + A+VM + GRS+GFGFV F + ++A A+ ++ G+ +GS+ + A
Sbjct: 312 KEFSPFGSITSAKVMLED--GRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQ 369
Query: 220 K 220
+
Sbjct: 370 R 370
Score = 38.5 bits (88), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRRSAAMAILSLN 115
++Y+ N+ + + L++ FS G + K++ +D S +GF+ + A A+ +N
Sbjct: 295 NLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMN 354
Query: 116 GRHLFGQPIKVNWAYASGQRE 136
GR + +P+ V A +R+
Sbjct: 355 GRIVGSKPLYVALAQRKEERK 375
>gi|402854027|ref|XP_003891682.1| PREDICTED: polyadenylate-binding protein 4 isoform 1 [Papio anubis]
Length = 660
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 130/281 (46%), Gaps = 47/281 (16%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIR----KDKSSYGFIHYFDRRSAAMAILS 113
S+YVG++H+ VTE +L E FS GPV ++ R + Y ++++ A A+ +
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 114 LNGRHLFGQPIKVNWAYASGQREDT---SGHFNIFVGDLSPEVTDATLFACFSVYPSCSD 170
+N + G+PI++ W+ QR+ + SG N+F+ +L + + L+ FS + +
Sbjct: 72 MNFDVIKGKPIRIMWS----QRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 171 ARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQS 230
+V+ D+ S+G+ FV F Q+ A AI + G L R++ G + ++
Sbjct: 128 CKVVCDENG--SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFV-------GRFKSRKE 178
Query: 231 SDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGV 290
+A EL + E +T VY+ N EV L F G +
Sbjct: 179 REA----ELGAKAKE----------------FTNVYIKNFGEEVDDESLKELFSQFGKTL 218
Query: 291 IEEVRVQRD-----KGFGFVRYSTHAEAALAIQMGNTTQSS 326
V+V RD KGFGFV Y H +A A++ N + S
Sbjct: 219 --SVKVMRDPSGKSKGFGFVSYEKHEDANKAVEEMNGKEIS 257
Score = 101 bits (251), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 130/283 (45%), Gaps = 31/283 (10%)
Query: 52 DPSTCRS----VYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRR 105
DPS +S V++ N+ + L + FS+ G + CK++ + S Y F+H+ +
Sbjct: 90 DPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQE 149
Query: 106 SAAMAILSLNGRHLFGQPIKVNWAYASGQREDTSG-----HFNIFVGDLSPEVTDATLFA 160
+A AI +NG L + + V + +RE G N+++ + EV D +L
Sbjct: 150 AADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKE 209
Query: 161 CFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATK 220
FS + +VM D +G+S+GFGFVS+ +DA A+ ++ GK + + I A K
Sbjct: 210 LFSQFGKTLSVKVMRD-PSGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRAQK 268
Query: 221 GAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLH 280
++Q+ EL + +E + Q +Y+ NL + L
Sbjct: 269 KV----ERQA-------ELKRKFEQLKQERISRY------QGVNLYIKNLDDTIDDEKLR 311
Query: 281 RHFHSLGAGVIEEVRVQ--RDKGFGFVRYSTHAEAALAIQMGN 321
+ F G+ +V ++ R KGFGFV +S+ EA A+ N
Sbjct: 312 KEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMN 354
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 88/181 (48%), Gaps = 20/181 (11%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRK---DKSSYGFIHYFDRRSAAMAILSL 114
+VY+ N +V + L+E+FS G K++R +GF+ Y A A+ +
Sbjct: 192 NVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGKSKGFGFVSYEKHEDANKAVEEM 251
Query: 115 NGRHLFGQPIKVNWAYASGQR-------------EDTSGH--FNIFVGDLSPEVTDATLF 159
NG+ + G+ I V A +R E S + N+++ +L + D L
Sbjct: 252 NGKEISGKIIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLR 311
Query: 160 ACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT 219
FS + S + A+VM + GRS+GFGFV F + ++A A+ ++ G+ +GS+ + A
Sbjct: 312 KEFSPFGSITSAKVMLED--GRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQ 369
Query: 220 K 220
+
Sbjct: 370 R 370
Score = 38.9 bits (89), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRRSAAMAILSLN 115
++Y+ N+ + + L++ FS G + K++ +D S +GF+ + A A+ +N
Sbjct: 295 NLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMN 354
Query: 116 GRHLFGQPIKVNWAYASGQRE 136
GR + +P+ V A +R+
Sbjct: 355 GRIVGSKPLYVALAQRKEERK 375
>gi|118102061|ref|XP_423721.2| PREDICTED: splicing factor 3B subunit 4 [Gallus gallus]
Length = 418
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 63/194 (32%), Positives = 104/194 (53%), Gaps = 10/194 (5%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS-----YGFIHYFDRRSAAMAIL 112
+VYVG + +V+EPLL E+F GPV + KD+ + YGF+ + A AI
Sbjct: 14 TVYVGGLDEKVSEPLLWELFLQAGPVVNTHM-PKDRVTGQHQGYGFVEFLSEEDADYAIK 72
Query: 113 SLNGRHLFGQPIKVNWAYASGQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSC-SDA 171
+N L+G+PI+VN A A + D NIF+G+L PE+ + L+ FS +
Sbjct: 73 IMNMIKLYGKPIRVNKASAHNKNLDVGA--NIFIGNLDPEIDEKLLYDTFSAFGVILQTP 130
Query: 172 RVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSS 231
++M D TG S+G+ F++F + + +AI + G++L +R I ++A K E + S
Sbjct: 131 KIMRDPDTGNSKGYAFINFASFDASDAAIEAMNGQYLCNRPITVSYAFKKDSKGE-RHGS 189
Query: 232 DAKSVVELTNGSSE 245
A+ ++ N S+
Sbjct: 190 AAERLLAAQNPLSQ 203
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/216 (22%), Positives = 93/216 (43%), Gaps = 44/216 (20%)
Query: 131 ASGQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSF 190
A+G + + ++VG L +V++ L+ F + + D+ TG+ +G+GFV F
Sbjct: 2 AAGPISERNQDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEF 61
Query: 191 RNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKET 250
+++DA AI + L + IR N A+ N L G++
Sbjct: 62 LSEEDADYAIKIMNMIKLYGKPIRVNKASAHNKN--------------LDVGAN------ 101
Query: 251 TNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRD------KGFGF 304
+++GNL PE+ + L+ F + G +++ ++ RD KG+ F
Sbjct: 102 --------------IFIGNLDPEIDEKLLYDTFSAFGV-ILQTPKIMRDPDTGNSKGYAF 146
Query: 305 VRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSK 340
+ +++ + AI+ N YL + + S+ K
Sbjct: 147 INFASFDASDAAIEAMN---GQYLCNRPITVSYAFK 179
>gi|410263250|gb|JAA19591.1| poly(A) binding protein, cytoplasmic 4 (inducible form) [Pan
troglodytes]
Length = 644
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 130/281 (46%), Gaps = 47/281 (16%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIR----KDKSSYGFIHYFDRRSAAMAILS 113
S+YVG++H+ VTE +L E FS GPV ++ R + Y ++++ A A+ +
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 114 LNGRHLFGQPIKVNWAYASGQREDT---SGHFNIFVGDLSPEVTDATLFACFSVYPSCSD 170
+N + G+PI++ W+ QR+ + SG N+F+ +L + + L+ FS + +
Sbjct: 72 MNFDVIKGKPIRIMWS----QRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 171 ARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQS 230
+V+ D+ S+G+ FV F Q+ A AI + G L R++ G + ++
Sbjct: 128 CKVVCDENG--SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFV-------GRFKSRKE 178
Query: 231 SDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGV 290
+A EL + E +T VY+ N EV L F G +
Sbjct: 179 REA----ELGAKAKE----------------FTNVYIKNFGEEVDDESLKELFSQFGKTL 218
Query: 291 IEEVRVQRD-----KGFGFVRYSTHAEAALAIQMGNTTQSS 326
V+V RD KGFGFV Y H +A A++ N + S
Sbjct: 219 --SVKVMRDPNGKSKGFGFVSYEKHEDANKAVEEMNGKEIS 257
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 129/283 (45%), Gaps = 31/283 (10%)
Query: 52 DPSTCRS----VYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRR 105
DPS +S V++ N+ + L + FS+ G + CK++ + S Y F+H+ +
Sbjct: 90 DPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQE 149
Query: 106 SAAMAILSLNGRHLFGQPIKVNWAYASGQREDTSG-----HFNIFVGDLSPEVTDATLFA 160
+A AI +NG L + + V + +RE G N+++ + EV D +L
Sbjct: 150 AADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKE 209
Query: 161 CFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATK 220
FS + +VM D G+S+GFGFVS+ +DA A+ ++ GK + + I A K
Sbjct: 210 LFSQFGKTLSVKVMRD-PNGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRAQK 268
Query: 221 GAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLH 280
++Q+ EL + +E + Q +Y+ NL + L
Sbjct: 269 KV----ERQA-------ELKRKFEQLKQERISRY------QGVNLYIKNLDDTIDDEKLR 311
Query: 281 RHFHSLGAGVIEEVRVQ--RDKGFGFVRYSTHAEAALAIQMGN 321
+ F G+ +V ++ R KGFGFV +S+ EA A+ N
Sbjct: 312 KEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMN 354
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 88/181 (48%), Gaps = 20/181 (11%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRK---DKSSYGFIHYFDRRSAAMAILSL 114
+VY+ N +V + L+E+FS G K++R +GF+ Y A A+ +
Sbjct: 192 NVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKHEDANKAVEEM 251
Query: 115 NGRHLFGQPIKVNWAYASGQR-------------EDTSGH--FNIFVGDLSPEVTDATLF 159
NG+ + G+ I V A +R E S + N+++ +L + D L
Sbjct: 252 NGKEISGKIIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLR 311
Query: 160 ACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT 219
FS + S + A+VM + GRS+GFGFV F + ++A A+ ++ G+ +GS+ + A
Sbjct: 312 KEFSPFGSITSAKVMLED--GRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQ 369
Query: 220 K 220
+
Sbjct: 370 R 370
Score = 38.9 bits (89), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRRSAAMAILSLN 115
++Y+ N+ + + L++ FS G + K++ +D S +GF+ + A A+ +N
Sbjct: 295 NLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMN 354
Query: 116 GRHLFGQPIKVNWAYASGQRE 136
GR + +P+ V A +R+
Sbjct: 355 GRIVGSKPLYVALAQRKEERK 375
>gi|410966840|ref|XP_003989935.1| PREDICTED: polyadenylate-binding protein 4 isoform 1 [Felis catus]
Length = 660
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 130/281 (46%), Gaps = 47/281 (16%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIR----KDKSSYGFIHYFDRRSAAMAILS 113
S+YVG++H+ VTE +L E FS GPV ++ R + Y ++++ A A+ +
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 114 LNGRHLFGQPIKVNWAYASGQREDT---SGHFNIFVGDLSPEVTDATLFACFSVYPSCSD 170
+N + G+PI++ W+ QR+ + SG N+F+ +L + + L+ FS + +
Sbjct: 72 MNFDVIKGKPIRIMWS----QRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 171 ARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQS 230
+V+ D+ S+G+ FV F Q+ A AI + G L R++ G + ++
Sbjct: 128 CKVVCDENG--SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFV-------GRFKSRKE 178
Query: 231 SDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGV 290
+A EL + E +T VY+ N EV L F G +
Sbjct: 179 REA----ELGAKAKE----------------FTNVYIKNFGEEVDDESLKELFSQFGKTL 218
Query: 291 IEEVRVQRD-----KGFGFVRYSTHAEAALAIQMGNTTQSS 326
V+V RD KGFGFV Y H +A A++ N + S
Sbjct: 219 --SVKVMRDPSGKSKGFGFVSYEKHEDANKAVEEMNGKEIS 257
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 130/283 (45%), Gaps = 31/283 (10%)
Query: 52 DPSTCRS----VYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRR 105
DPS +S V++ N+ + L + FS+ G + CK++ + S Y F+H+ +
Sbjct: 90 DPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQE 149
Query: 106 SAAMAILSLNGRHLFGQPIKVNWAYASGQREDTSG-----HFNIFVGDLSPEVTDATLFA 160
+A AI +NG L + + V + +RE G N+++ + EV D +L
Sbjct: 150 AADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKE 209
Query: 161 CFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATK 220
FS + +VM D +G+S+GFGFVS+ +DA A+ ++ GK + + I A K
Sbjct: 210 LFSQFGKTLSVKVMRD-PSGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKVIFVGRAQK 268
Query: 221 GAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLH 280
++Q+ EL + +E + Q +Y+ NL + L
Sbjct: 269 KV----ERQA-------ELKRKFEQLKQERISRY------QGVNLYIKNLDDTIDDEKLR 311
Query: 281 RHFHSLGAGVIEEVRVQ--RDKGFGFVRYSTHAEAALAIQMGN 321
+ F G+ +V ++ R KGFGFV +S+ EA A+ N
Sbjct: 312 KEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMN 354
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 88/181 (48%), Gaps = 20/181 (11%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRK---DKSSYGFIHYFDRRSAAMAILSL 114
+VY+ N +V + L+E+FS G K++R +GF+ Y A A+ +
Sbjct: 192 NVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGKSKGFGFVSYEKHEDANKAVEEM 251
Query: 115 NGRHLFGQPIKVNWAYASGQR-------------EDTSGH--FNIFVGDLSPEVTDATLF 159
NG+ + G+ I V A +R E S + N+++ +L + D L
Sbjct: 252 NGKEISGKVIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLR 311
Query: 160 ACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT 219
FS + S + A+VM + GRS+GFGFV F + ++A A+ ++ G+ +GS+ + A
Sbjct: 312 KEFSPFGSITSAKVMLED--GRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQ 369
Query: 220 K 220
+
Sbjct: 370 R 370
Score = 38.9 bits (89), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRRSAAMAILSLN 115
++Y+ N+ + + L++ FS G + K++ +D S +GF+ + A A+ +N
Sbjct: 295 NLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMN 354
Query: 116 GRHLFGQPIKVNWAYASGQRE 136
GR + +P+ V A +R+
Sbjct: 355 GRIVGSKPLYVALAQRKEERK 375
>gi|403292058|ref|XP_003937074.1| PREDICTED: polyadenylate-binding protein 4 isoform 1 [Saimiri
boliviensis boliviensis]
Length = 659
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 130/281 (46%), Gaps = 47/281 (16%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIR----KDKSSYGFIHYFDRRSAAMAILS 113
S+YVG++H+ VTE +L E FS GPV ++ R + Y ++++ A A+ +
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 114 LNGRHLFGQPIKVNWAYASGQREDT---SGHFNIFVGDLSPEVTDATLFACFSVYPSCSD 170
+N + G+PI++ W+ QR+ + SG N+F+ +L + + L+ FS + +
Sbjct: 72 MNFDVIKGKPIRIMWS----QRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 171 ARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQS 230
+V+ D+ S+G+ FV F Q+ A AI + G L R++ G + ++
Sbjct: 128 CKVVCDENG--SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFV-------GRFKSRKE 178
Query: 231 SDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGV 290
+A EL + E +T VY+ N EV L F G +
Sbjct: 179 REA----ELGAKAKE----------------FTNVYIKNFGEEVDDESLKELFSQFGKTL 218
Query: 291 IEEVRVQRD-----KGFGFVRYSTHAEAALAIQMGNTTQSS 326
V+V RD KGFGFV Y H +A A++ N + S
Sbjct: 219 --SVKVMRDPNGKSKGFGFVSYEKHEDANKAVEEMNGKEIS 257
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 129/283 (45%), Gaps = 31/283 (10%)
Query: 52 DPSTCRS----VYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRR 105
DPS +S V++ N+ + L + FS+ G + CK++ + S Y F+H+ +
Sbjct: 90 DPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQE 149
Query: 106 SAAMAILSLNGRHLFGQPIKVNWAYASGQREDTSG-----HFNIFVGDLSPEVTDATLFA 160
+A AI +NG L + + V + +RE G N+++ + EV D +L
Sbjct: 150 AADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKE 209
Query: 161 CFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATK 220
FS + +VM D G+S+GFGFVS+ +DA A+ ++ GK + + I A K
Sbjct: 210 LFSQFGKTLSVKVMRD-PNGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRAQK 268
Query: 221 GAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLH 280
++Q+ EL + +E + Q +Y+ NL + L
Sbjct: 269 KV----ERQA-------ELKRKFEQLKQERISRY------QGVNLYIKNLDDTIDDEKLR 311
Query: 281 RHFHSLGAGVIEEVRVQ--RDKGFGFVRYSTHAEAALAIQMGN 321
+ F G+ +V ++ R KGFGFV +S+ EA A+ N
Sbjct: 312 KEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMN 354
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 88/181 (48%), Gaps = 20/181 (11%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRK---DKSSYGFIHYFDRRSAAMAILSL 114
+VY+ N +V + L+E+FS G K++R +GF+ Y A A+ +
Sbjct: 192 NVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKHEDANKAVEEM 251
Query: 115 NGRHLFGQPIKVNWAYASGQR-------------EDTSGH--FNIFVGDLSPEVTDATLF 159
NG+ + G+ I V A +R E S + N+++ +L + D L
Sbjct: 252 NGKEISGKIIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLR 311
Query: 160 ACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT 219
FS + S + A+VM + GRS+GFGFV F + ++A A+ ++ G+ +GS+ + A
Sbjct: 312 KEFSPFGSITSAKVMLED--GRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQ 369
Query: 220 K 220
+
Sbjct: 370 R 370
Score = 38.9 bits (89), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRRSAAMAILSLN 115
++Y+ N+ + + L++ FS G + K++ +D S +GF+ + A A+ +N
Sbjct: 295 NLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMN 354
Query: 116 GRHLFGQPIKVNWAYASGQRE 136
GR + +P+ V A +R+
Sbjct: 355 GRIVGSKPLYVALAQRKEERK 375
>gi|332248417|ref|XP_003273360.1| PREDICTED: polyadenylate-binding protein 4 isoform 3 [Nomascus
leucogenys]
gi|383411099|gb|AFH28763.1| polyadenylate-binding protein 4 isoform 3 [Macaca mulatta]
gi|384941234|gb|AFI34222.1| polyadenylate-binding protein 4 isoform 3 [Macaca mulatta]
Length = 631
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 130/281 (46%), Gaps = 47/281 (16%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIR----KDKSSYGFIHYFDRRSAAMAILS 113
S+YVG++H+ VTE +L E FS GPV ++ R + Y ++++ A A+ +
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 114 LNGRHLFGQPIKVNWAYASGQREDT---SGHFNIFVGDLSPEVTDATLFACFSVYPSCSD 170
+N + G+PI++ W+ QR+ + SG N+F+ +L + + L+ FS + +
Sbjct: 72 MNFDVIKGKPIRIMWS----QRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 171 ARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQS 230
+V+ D+ S+G+ FV F Q+ A AI + G L R++ G + ++
Sbjct: 128 CKVVCDENG--SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFV-------GRFKSRKE 178
Query: 231 SDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGV 290
+A EL + E +T VY+ N EV L F G +
Sbjct: 179 REA----ELGAKAKE----------------FTNVYIKNFGEEVDDESLKELFSQFGKTL 218
Query: 291 IEEVRVQRD-----KGFGFVRYSTHAEAALAIQMGNTTQSS 326
V+V RD KGFGFV Y H +A A++ N + S
Sbjct: 219 --SVKVMRDPSGKSKGFGFVSYEKHEDANKAVEEMNGKEIS 257
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 130/283 (45%), Gaps = 31/283 (10%)
Query: 52 DPSTCRS----VYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRR 105
DPS +S V++ N+ + L + FS+ G + CK++ + S Y F+H+ +
Sbjct: 90 DPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQE 149
Query: 106 SAAMAILSLNGRHLFGQPIKVNWAYASGQREDTSG-----HFNIFVGDLSPEVTDATLFA 160
+A AI +NG L + + V + +RE G N+++ + EV D +L
Sbjct: 150 AADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKE 209
Query: 161 CFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATK 220
FS + +VM D +G+S+GFGFVS+ +DA A+ ++ GK + + I A K
Sbjct: 210 LFSQFGKTLSVKVMRD-PSGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRAQK 268
Query: 221 GAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLH 280
++Q+ EL + +E + Q +Y+ NL + L
Sbjct: 269 KV----ERQA-------ELKRKFEQLKQERISRY------QGVNLYIKNLDDTIDDEKLR 311
Query: 281 RHFHSLGAGVIEEVRVQ--RDKGFGFVRYSTHAEAALAIQMGN 321
+ F G+ +V ++ R KGFGFV +S+ EA A+ N
Sbjct: 312 KEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMN 354
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 88/181 (48%), Gaps = 20/181 (11%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRK---DKSSYGFIHYFDRRSAAMAILSL 114
+VY+ N +V + L+E+FS G K++R +GF+ Y A A+ +
Sbjct: 192 NVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGKSKGFGFVSYEKHEDANKAVEEM 251
Query: 115 NGRHLFGQPIKVNWAYASGQR-------------EDTSGH--FNIFVGDLSPEVTDATLF 159
NG+ + G+ I V A +R E S + N+++ +L + D L
Sbjct: 252 NGKEISGKIIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLR 311
Query: 160 ACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT 219
FS + S + A+VM + GRS+GFGFV F + ++A A+ ++ G+ +GS+ + A
Sbjct: 312 KEFSPFGSITSAKVMLED--GRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQ 369
Query: 220 K 220
+
Sbjct: 370 R 370
Score = 38.9 bits (89), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRRSAAMAILSLN 115
++Y+ N+ + + L++ FS G + K++ +D S +GF+ + A A+ +N
Sbjct: 295 NLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMN 354
Query: 116 GRHLFGQPIKVNWAYASGQRE 136
GR + +P+ V A +R+
Sbjct: 355 GRIVGSKPLYVALAQRKEERK 375
>gi|208431833|ref|NP_001129125.1| polyadenylate-binding protein 4 isoform 1 [Homo sapiens]
gi|332808508|ref|XP_513344.3| PREDICTED: polyadenylate-binding protein 4 isoform 3 [Pan
troglodytes]
gi|395730714|ref|XP_002811047.2| PREDICTED: polyadenylate-binding protein 4 isoform 1 [Pongo abelii]
gi|397488842|ref|XP_003815452.1| PREDICTED: polyadenylate-binding protein 4 isoform 1 [Pan paniscus]
gi|426329062|ref|XP_004025563.1| PREDICTED: polyadenylate-binding protein 4 isoform 1 [Gorilla
gorilla gorilla]
gi|66267552|gb|AAH94755.1| PABPC4 protein [Homo sapiens]
gi|119627668|gb|EAX07263.1| poly(A) binding protein, cytoplasmic 4 (inducible form), isoform
CRA_c [Homo sapiens]
gi|410227598|gb|JAA11018.1| poly(A) binding protein, cytoplasmic 4 (inducible form) [Pan
troglodytes]
gi|410227604|gb|JAA11021.1| poly(A) binding protein, cytoplasmic 4 (inducible form) [Pan
troglodytes]
Length = 660
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 130/281 (46%), Gaps = 47/281 (16%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIR----KDKSSYGFIHYFDRRSAAMAILS 113
S+YVG++H+ VTE +L E FS GPV ++ R + Y ++++ A A+ +
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 114 LNGRHLFGQPIKVNWAYASGQREDT---SGHFNIFVGDLSPEVTDATLFACFSVYPSCSD 170
+N + G+PI++ W+ QR+ + SG N+F+ +L + + L+ FS + +
Sbjct: 72 MNFDVIKGKPIRIMWS----QRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 171 ARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQS 230
+V+ D+ S+G+ FV F Q+ A AI + G L R++ G + ++
Sbjct: 128 CKVVCDENG--SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFV-------GRFKSRKE 178
Query: 231 SDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGV 290
+A EL + E +T VY+ N EV L F G +
Sbjct: 179 REA----ELGAKAKE----------------FTNVYIKNFGEEVDDESLKELFSQFGKTL 218
Query: 291 IEEVRVQRD-----KGFGFVRYSTHAEAALAIQMGNTTQSS 326
V+V RD KGFGFV Y H +A A++ N + S
Sbjct: 219 --SVKVMRDPNGKSKGFGFVSYEKHEDANKAVEEMNGKEIS 257
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 129/283 (45%), Gaps = 31/283 (10%)
Query: 52 DPSTCRS----VYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRR 105
DPS +S V++ N+ + L + FS+ G + CK++ + S Y F+H+ +
Sbjct: 90 DPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQE 149
Query: 106 SAAMAILSLNGRHLFGQPIKVNWAYASGQREDTSG-----HFNIFVGDLSPEVTDATLFA 160
+A AI +NG L + + V + +RE G N+++ + EV D +L
Sbjct: 150 AADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKE 209
Query: 161 CFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATK 220
FS + +VM D G+S+GFGFVS+ +DA A+ ++ GK + + I A K
Sbjct: 210 LFSQFGKTLSVKVMRD-PNGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRAQK 268
Query: 221 GAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLH 280
++Q+ EL + +E + Q +Y+ NL + L
Sbjct: 269 KV----ERQA-------ELKRKFEQLKQERISRY------QGVNLYIKNLDDTIDDEKLR 311
Query: 281 RHFHSLGAGVIEEVRVQ--RDKGFGFVRYSTHAEAALAIQMGN 321
+ F G+ +V ++ R KGFGFV +S+ EA A+ N
Sbjct: 312 KEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMN 354
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 88/181 (48%), Gaps = 20/181 (11%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRK---DKSSYGFIHYFDRRSAAMAILSL 114
+VY+ N +V + L+E+FS G K++R +GF+ Y A A+ +
Sbjct: 192 NVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKHEDANKAVEEM 251
Query: 115 NGRHLFGQPIKVNWAYASGQR-------------EDTSGH--FNIFVGDLSPEVTDATLF 159
NG+ + G+ I V A +R E S + N+++ +L + D L
Sbjct: 252 NGKEISGKIIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLR 311
Query: 160 ACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT 219
FS + S + A+VM + GRS+GFGFV F + ++A A+ ++ G+ +GS+ + A
Sbjct: 312 KEFSPFGSITSAKVMLED--GRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQ 369
Query: 220 K 220
+
Sbjct: 370 R 370
Score = 38.9 bits (89), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRRSAAMAILSLN 115
++Y+ N+ + + L++ FS G + K++ +D S +GF+ + A A+ +N
Sbjct: 295 NLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMN 354
Query: 116 GRHLFGQPIKVNWAYASGQRE 136
GR + +P+ V A +R+
Sbjct: 355 GRIVGSKPLYVALAQRKEERK 375
>gi|402854029|ref|XP_003891683.1| PREDICTED: polyadenylate-binding protein 4 isoform 2 [Papio anubis]
Length = 644
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 130/281 (46%), Gaps = 47/281 (16%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIR----KDKSSYGFIHYFDRRSAAMAILS 113
S+YVG++H+ VTE +L E FS GPV ++ R + Y ++++ A A+ +
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 114 LNGRHLFGQPIKVNWAYASGQREDT---SGHFNIFVGDLSPEVTDATLFACFSVYPSCSD 170
+N + G+PI++ W+ QR+ + SG N+F+ +L + + L+ FS + +
Sbjct: 72 MNFDVIKGKPIRIMWS----QRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 171 ARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQS 230
+V+ D+ S+G+ FV F Q+ A AI + G L R++ G + ++
Sbjct: 128 CKVVCDENG--SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFV-------GRFKSRKE 178
Query: 231 SDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGV 290
+A EL + E +T VY+ N EV L F G +
Sbjct: 179 REA----ELGAKAKE----------------FTNVYIKNFGEEVDDESLKELFSQFGKTL 218
Query: 291 IEEVRVQRD-----KGFGFVRYSTHAEAALAIQMGNTTQSS 326
V+V RD KGFGFV Y H +A A++ N + S
Sbjct: 219 --SVKVMRDPSGKSKGFGFVSYEKHEDANKAVEEMNGKEIS 257
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 130/283 (45%), Gaps = 31/283 (10%)
Query: 52 DPSTCRS----VYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRR 105
DPS +S V++ N+ + L + FS+ G + CK++ + S Y F+H+ +
Sbjct: 90 DPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQE 149
Query: 106 SAAMAILSLNGRHLFGQPIKVNWAYASGQREDTSG-----HFNIFVGDLSPEVTDATLFA 160
+A AI +NG L + + V + +RE G N+++ + EV D +L
Sbjct: 150 AADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKE 209
Query: 161 CFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATK 220
FS + +VM D +G+S+GFGFVS+ +DA A+ ++ GK + + I A K
Sbjct: 210 LFSQFGKTLSVKVMRD-PSGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRAQK 268
Query: 221 GAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLH 280
++Q+ EL + +E + Q +Y+ NL + L
Sbjct: 269 KV----ERQA-------ELKRKFEQLKQERISRY------QGVNLYIKNLDDTIDDEKLR 311
Query: 281 RHFHSLGAGVIEEVRVQ--RDKGFGFVRYSTHAEAALAIQMGN 321
+ F G+ +V ++ R KGFGFV +S+ EA A+ N
Sbjct: 312 KEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMN 354
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 88/181 (48%), Gaps = 20/181 (11%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRK---DKSSYGFIHYFDRRSAAMAILSL 114
+VY+ N +V + L+E+FS G K++R +GF+ Y A A+ +
Sbjct: 192 NVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGKSKGFGFVSYEKHEDANKAVEEM 251
Query: 115 NGRHLFGQPIKVNWAYASGQR-------------EDTSGH--FNIFVGDLSPEVTDATLF 159
NG+ + G+ I V A +R E S + N+++ +L + D L
Sbjct: 252 NGKEISGKIIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLR 311
Query: 160 ACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT 219
FS + S + A+VM + GRS+GFGFV F + ++A A+ ++ G+ +GS+ + A
Sbjct: 312 KEFSPFGSITSAKVMLED--GRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQ 369
Query: 220 K 220
+
Sbjct: 370 R 370
Score = 38.9 bits (89), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRRSAAMAILSLN 115
++Y+ N+ + + L++ FS G + K++ +D S +GF+ + A A+ +N
Sbjct: 295 NLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMN 354
Query: 116 GRHLFGQPIKVNWAYASGQRE 136
GR + +P+ V A +R+
Sbjct: 355 GRIVGSKPLYVALAQRKEERK 375
>gi|395853072|ref|XP_003799044.1| PREDICTED: polyadenylate-binding protein 4 isoform 3 [Otolemur
garnettii]
Length = 633
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 130/281 (46%), Gaps = 47/281 (16%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIR----KDKSSYGFIHYFDRRSAAMAILS 113
S+YVG++H+ VTE +L E FS GPV ++ R + Y ++++ A A+ +
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 114 LNGRHLFGQPIKVNWAYASGQREDT---SGHFNIFVGDLSPEVTDATLFACFSVYPSCSD 170
+N + G+PI++ W+ QR+ + SG N+F+ +L + + L+ FS + +
Sbjct: 72 MNFDVIKGKPIRIMWS----QRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 171 ARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQS 230
+V+ D+ S+G+ FV F Q+ A AI + G L R++ G + ++
Sbjct: 128 CKVVCDENG--SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFV-------GRFKSRKE 178
Query: 231 SDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGV 290
+A EL + E +T VY+ N EV L F G +
Sbjct: 179 REA----ELGAKAKE----------------FTNVYIKNFGEEVDDESLKELFSQFGKTL 218
Query: 291 IEEVRVQRD-----KGFGFVRYSTHAEAALAIQMGNTTQSS 326
V+V RD KGFGFV Y H +A A++ N + S
Sbjct: 219 --SVKVMRDPSGKSKGFGFVSYEKHEDANKAVEEMNGKEIS 257
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 130/283 (45%), Gaps = 31/283 (10%)
Query: 52 DPSTCRS----VYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRR 105
DPS +S V++ N+ + L + FS+ G + CK++ + S Y F+H+ +
Sbjct: 90 DPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQE 149
Query: 106 SAAMAILSLNGRHLFGQPIKVNWAYASGQREDTSG-----HFNIFVGDLSPEVTDATLFA 160
+A AI +NG L + + V + +RE G N+++ + EV D +L
Sbjct: 150 AADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKE 209
Query: 161 CFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATK 220
FS + +VM D +G+S+GFGFVS+ +DA A+ ++ GK + + I A K
Sbjct: 210 LFSQFGKTLSVKVMRD-PSGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKVIFVGRAQK 268
Query: 221 GAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLH 280
++Q+ EL + +E + Q +Y+ NL + L
Sbjct: 269 KV----ERQA-------ELKRKFEQLKQERISRY------QGVNLYIKNLDDTIDDEKLR 311
Query: 281 RHFHSLGAGVIEEVRVQ--RDKGFGFVRYSTHAEAALAIQMGN 321
+ F G+ +V ++ R KGFGFV +S+ EA A+ N
Sbjct: 312 KEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMN 354
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 88/181 (48%), Gaps = 20/181 (11%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRK---DKSSYGFIHYFDRRSAAMAILSL 114
+VY+ N +V + L+E+FS G K++R +GF+ Y A A+ +
Sbjct: 192 NVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGKSKGFGFVSYEKHEDANKAVEEM 251
Query: 115 NGRHLFGQPIKVNWAYASGQR-------------EDTSGH--FNIFVGDLSPEVTDATLF 159
NG+ + G+ I V A +R E S + N+++ +L + D L
Sbjct: 252 NGKEISGKVIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLR 311
Query: 160 ACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT 219
FS + S + A+VM + GRS+GFGFV F + ++A A+ ++ G+ +GS+ + A
Sbjct: 312 KEFSPFGSITSAKVMLED--GRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQ 369
Query: 220 K 220
+
Sbjct: 370 R 370
Score = 38.9 bits (89), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRRSAAMAILSLN 115
++Y+ N+ + + L++ FS G + K++ +D S +GF+ + A A+ +N
Sbjct: 295 NLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMN 354
Query: 116 GRHLFGQPIKVNWAYASGQRE 136
GR + +P+ V A +R+
Sbjct: 355 GRIVGSKPLYVALAQRKEERK 375
>gi|338721952|ref|XP_003364452.1| PREDICTED: polyadenylate-binding protein 4 isoform 3 [Equus
caballus]
Length = 631
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 130/281 (46%), Gaps = 47/281 (16%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIR----KDKSSYGFIHYFDRRSAAMAILS 113
S+YVG++H+ VTE +L E FS GPV ++ R + Y ++++ A A+ +
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 114 LNGRHLFGQPIKVNWAYASGQREDT---SGHFNIFVGDLSPEVTDATLFACFSVYPSCSD 170
+N + G+PI++ W+ QR+ + SG N+F+ +L + + L+ FS + +
Sbjct: 72 MNFDVIKGKPIRIMWS----QRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 171 ARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQS 230
+V+ D+ S+G+ FV F Q+ A AI + G L R++ G + ++
Sbjct: 128 CKVVCDENG--SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFV-------GRFKSRKE 178
Query: 231 SDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGV 290
+A EL + E +T VY+ N EV L F G +
Sbjct: 179 REA----ELGAKAKE----------------FTNVYIKNFGEEVDDESLKELFSQFGKTL 218
Query: 291 IEEVRVQRD-----KGFGFVRYSTHAEAALAIQMGNTTQSS 326
V+V RD KGFGFV Y H +A A++ N + S
Sbjct: 219 --SVKVMRDPSGKSKGFGFVSYEKHEDANKAVEEMNGKEIS 257
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 130/283 (45%), Gaps = 31/283 (10%)
Query: 52 DPSTCRS----VYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRR 105
DPS +S V++ N+ + L + FS+ G + CK++ + S Y F+H+ +
Sbjct: 90 DPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQE 149
Query: 106 SAAMAILSLNGRHLFGQPIKVNWAYASGQREDTSG-----HFNIFVGDLSPEVTDATLFA 160
+A AI +NG L + + V + +RE G N+++ + EV D +L
Sbjct: 150 AADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKE 209
Query: 161 CFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATK 220
FS + +VM D +G+S+GFGFVS+ +DA A+ ++ GK + + I A K
Sbjct: 210 LFSQFGKTLSVKVMRD-PSGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKVIFVGRAQK 268
Query: 221 GAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLH 280
++Q+ EL + +E + Q +Y+ NL + L
Sbjct: 269 KV----ERQA-------ELKRKFEQLKQERISRY------QGVNLYIKNLDDTIDDEKLR 311
Query: 281 RHFHSLGAGVIEEVRVQ--RDKGFGFVRYSTHAEAALAIQMGN 321
+ F G+ +V ++ R KGFGFV +S+ EA A+ N
Sbjct: 312 KEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMN 354
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 88/181 (48%), Gaps = 20/181 (11%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRK---DKSSYGFIHYFDRRSAAMAILSL 114
+VY+ N +V + L+E+FS G K++R +GF+ Y A A+ +
Sbjct: 192 NVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGKSKGFGFVSYEKHEDANKAVEEM 251
Query: 115 NGRHLFGQPIKVNWAYASGQR-------------EDTSGH--FNIFVGDLSPEVTDATLF 159
NG+ + G+ I V A +R E S + N+++ +L + D L
Sbjct: 252 NGKEISGKVIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLR 311
Query: 160 ACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT 219
FS + S + A+VM + GRS+GFGFV F + ++A A+ ++ G+ +GS+ + A
Sbjct: 312 KEFSPFGSITSAKVMLED--GRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQ 369
Query: 220 K 220
+
Sbjct: 370 R 370
Score = 38.9 bits (89), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRRSAAMAILSLN 115
++Y+ N+ + + L++ FS G + K++ +D S +GF+ + A A+ +N
Sbjct: 295 NLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMN 354
Query: 116 GRHLFGQPIKVNWAYASGQRE 136
GR + +P+ V A +R+
Sbjct: 355 GRIVGSKPLYVALAQRKEERK 375
>gi|48734702|gb|AAH71591.1| PABPC4 protein [Homo sapiens]
Length = 660
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 130/281 (46%), Gaps = 47/281 (16%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIR----KDKSSYGFIHYFDRRSAAMAILS 113
S+YVG++H+ VTE +L E FS GPV ++ R + Y ++++ A A+ +
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 114 LNGRHLFGQPIKVNWAYASGQREDT---SGHFNIFVGDLSPEVTDATLFACFSVYPSCSD 170
+N + G+PI++ W+ QR+ + SG N+F+ +L + + L+ FS + +
Sbjct: 72 MNFDVIKGKPIRIMWS----QRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 171 ARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQS 230
+V+ D+ S+G+ FV F Q+ A AI + G L R++ G + ++
Sbjct: 128 CKVVCDENG--SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFV-------GRFKSRKE 178
Query: 231 SDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGV 290
+A EL + E +T VY+ N EV L F G +
Sbjct: 179 REA----ELGAKAKE----------------FTNVYIKNFGEEVDDESLKELFSQFGKTL 218
Query: 291 IEEVRVQRD-----KGFGFVRYSTHAEAALAIQMGNTTQSS 326
V+V RD KGFGFV Y H +A A++ N + S
Sbjct: 219 --SVKVMRDPNGKSKGFGFVSYEKHEDANKAVEEMNGKEIS 257
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 129/283 (45%), Gaps = 31/283 (10%)
Query: 52 DPSTCRS----VYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRR 105
DPS +S V++ N+ + L + FS+ G + CK++ + S Y F+H+ +
Sbjct: 90 DPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQE 149
Query: 106 SAAMAILSLNGRHLFGQPIKVNWAYASGQREDTSG-----HFNIFVGDLSPEVTDATLFA 160
+A AI +NG L + + V + +RE G N+++ + EV D +L
Sbjct: 150 AADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKE 209
Query: 161 CFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATK 220
FS + +VM D G+S+GFGFVS+ +DA A+ ++ GK + + I A K
Sbjct: 210 LFSQFGKTLSVKVMRD-PNGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRAQK 268
Query: 221 GAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLH 280
++Q+ EL + +E + Q +Y+ NL + L
Sbjct: 269 KV----ERQA-------ELKRKFEQLKQERISRY------QGVNLYIKNLDDTIDDEKLR 311
Query: 281 RHFHSLGAGVIEEVRVQ--RDKGFGFVRYSTHAEAALAIQMGN 321
+ F G+ +V ++ R KGFGFV +S+ EA A+ N
Sbjct: 312 KEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMN 354
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 88/181 (48%), Gaps = 20/181 (11%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRK---DKSSYGFIHYFDRRSAAMAILSL 114
+VY+ N +V + L+E+FS G K++R +GF+ Y A A+ +
Sbjct: 192 NVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKHEDANKAVEEM 251
Query: 115 NGRHLFGQPIKVNWAYASGQR-------------EDTSGH--FNIFVGDLSPEVTDATLF 159
NG+ + G+ I V A +R E S + N+++ +L + D L
Sbjct: 252 NGKEISGKIIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLR 311
Query: 160 ACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT 219
FS + S + A+VM + GRS+GFGFV F + ++A A+ ++ G+ +GS+ + A
Sbjct: 312 KEFSPFGSITSAKVMLED--GRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQ 369
Query: 220 K 220
+
Sbjct: 370 R 370
Score = 38.9 bits (89), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRRSAAMAILSLN 115
++Y+ N+ + + L++ FS G + K++ +D S +GF+ + A A+ +N
Sbjct: 295 NLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMN 354
Query: 116 GRHLFGQPIKVNWAYASGQRE 136
GR + +P+ V A +R+
Sbjct: 355 GRIVGSKPLYVALAQRKEERK 375
>gi|410263248|gb|JAA19590.1| poly(A) binding protein, cytoplasmic 4 (inducible form) [Pan
troglodytes]
gi|410263254|gb|JAA19593.1| poly(A) binding protein, cytoplasmic 4 (inducible form) [Pan
troglodytes]
Length = 660
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 130/281 (46%), Gaps = 47/281 (16%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIR----KDKSSYGFIHYFDRRSAAMAILS 113
S+YVG++H+ VTE +L E FS GPV ++ R + Y ++++ A A+ +
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 114 LNGRHLFGQPIKVNWAYASGQREDT---SGHFNIFVGDLSPEVTDATLFACFSVYPSCSD 170
+N + G+PI++ W+ QR+ + SG N+F+ +L + + L+ FS + +
Sbjct: 72 MNFDVIKGKPIRIMWS----QRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 171 ARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQS 230
+V+ D+ S+G+ FV F Q+ A AI + G L R++ G + ++
Sbjct: 128 CKVVCDENG--SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFV-------GRFKSRKE 178
Query: 231 SDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGV 290
+A EL + E +T VY+ N EV L F G +
Sbjct: 179 REA----ELGAKAKE----------------FTNVYIKNFGEEVDDESLKELFSQFGKTL 218
Query: 291 IEEVRVQRD-----KGFGFVRYSTHAEAALAIQMGNTTQSS 326
V+V RD KGFGFV Y H +A A++ N + S
Sbjct: 219 --SVKVMRDPNGKSKGFGFVSYEKHEDANKAVEEMNGKEIS 257
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 129/283 (45%), Gaps = 31/283 (10%)
Query: 52 DPSTCRS----VYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRR 105
DPS +S V++ N+ + L + FS+ G + CK++ + S Y F+H+ +
Sbjct: 90 DPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQE 149
Query: 106 SAAMAILSLNGRHLFGQPIKVNWAYASGQREDTSG-----HFNIFVGDLSPEVTDATLFA 160
+A AI +NG L + + V + +RE G N+++ + EV D +L
Sbjct: 150 AADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKE 209
Query: 161 CFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATK 220
FS + +VM D G+S+GFGFVS+ +DA A+ ++ GK + + I A K
Sbjct: 210 LFSQFGKTLSVKVMRD-PNGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRAQK 268
Query: 221 GAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLH 280
++Q+ EL + +E + Q +Y+ NL + L
Sbjct: 269 KV----ERQA-------ELKRKFEQLKQERISRY------QGVNLYIKNLDDTIDDEKLR 311
Query: 281 RHFHSLGAGVIEEVRVQ--RDKGFGFVRYSTHAEAALAIQMGN 321
+ F G+ +V ++ R KGFGFV +S+ EA A+ N
Sbjct: 312 KEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMN 354
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 88/181 (48%), Gaps = 20/181 (11%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRK---DKSSYGFIHYFDRRSAAMAILSL 114
+VY+ N +V + L+E+FS G K++R +GF+ Y A A+ +
Sbjct: 192 NVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKHEDANKAVEEM 251
Query: 115 NGRHLFGQPIKVNWAYASGQR-------------EDTSGH--FNIFVGDLSPEVTDATLF 159
NG+ + G+ I V A +R E S + N+++ +L + D L
Sbjct: 252 NGKEISGKIIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLR 311
Query: 160 ACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT 219
FS + S + A+VM + GRS+GFGFV F + ++A A+ ++ G+ +GS+ + A
Sbjct: 312 KEFSPFGSITSAKVMLED--GRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQ 369
Query: 220 K 220
+
Sbjct: 370 R 370
Score = 38.9 bits (89), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRRSAAMAILSLN 115
++Y+ N+ + + L++ FS G + K++ +D S +GF+ + A A+ +N
Sbjct: 295 NLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMN 354
Query: 116 GRHLFGQPIKVNWAYASGQRE 136
GR + +P+ V A +R+
Sbjct: 355 GRIVGSKPLYVALAQRKEERK 375
>gi|208431836|ref|NP_001129126.1| polyadenylate-binding protein 4 isoform 3 [Homo sapiens]
gi|332808512|ref|XP_003308043.1| PREDICTED: polyadenylate-binding protein 4 [Pan troglodytes]
gi|395730718|ref|XP_003775778.1| PREDICTED: polyadenylate-binding protein 4 isoform 3 [Pongo abelii]
gi|426329064|ref|XP_004025564.1| PREDICTED: polyadenylate-binding protein 4 isoform 2 [Gorilla
gorilla gorilla]
gi|119627671|gb|EAX07266.1| poly(A) binding protein, cytoplasmic 4 (inducible form), isoform
CRA_f [Homo sapiens]
gi|410227602|gb|JAA11020.1| poly(A) binding protein, cytoplasmic 4 (inducible form) [Pan
troglodytes]
Length = 631
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 130/281 (46%), Gaps = 47/281 (16%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIR----KDKSSYGFIHYFDRRSAAMAILS 113
S+YVG++H+ VTE +L E FS GPV ++ R + Y ++++ A A+ +
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 114 LNGRHLFGQPIKVNWAYASGQREDT---SGHFNIFVGDLSPEVTDATLFACFSVYPSCSD 170
+N + G+PI++ W+ QR+ + SG N+F+ +L + + L+ FS + +
Sbjct: 72 MNFDVIKGKPIRIMWS----QRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 171 ARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQS 230
+V+ D+ S+G+ FV F Q+ A AI + G L R++ G + ++
Sbjct: 128 CKVVCDENG--SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFV-------GRFKSRKE 178
Query: 231 SDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGV 290
+A EL + E +T VY+ N EV L F G +
Sbjct: 179 REA----ELGAKAKE----------------FTNVYIKNFGEEVDDESLKELFSQFGKTL 218
Query: 291 IEEVRVQRD-----KGFGFVRYSTHAEAALAIQMGNTTQSS 326
V+V RD KGFGFV Y H +A A++ N + S
Sbjct: 219 --SVKVMRDPNGKSKGFGFVSYEKHEDANKAVEEMNGKEIS 257
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 129/283 (45%), Gaps = 31/283 (10%)
Query: 52 DPSTCRS----VYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRR 105
DPS +S V++ N+ + L + FS+ G + CK++ + S Y F+H+ +
Sbjct: 90 DPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQE 149
Query: 106 SAAMAILSLNGRHLFGQPIKVNWAYASGQREDTSG-----HFNIFVGDLSPEVTDATLFA 160
+A AI +NG L + + V + +RE G N+++ + EV D +L
Sbjct: 150 AADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKE 209
Query: 161 CFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATK 220
FS + +VM D G+S+GFGFVS+ +DA A+ ++ GK + + I A K
Sbjct: 210 LFSQFGKTLSVKVMRD-PNGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRAQK 268
Query: 221 GAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLH 280
++Q+ EL + +E + Q +Y+ NL + L
Sbjct: 269 KV----ERQA-------ELKRKFEQLKQERISRY------QGVNLYIKNLDDTIDDEKLR 311
Query: 281 RHFHSLGAGVIEEVRVQ--RDKGFGFVRYSTHAEAALAIQMGN 321
+ F G+ +V ++ R KGFGFV +S+ EA A+ N
Sbjct: 312 KEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMN 354
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 88/181 (48%), Gaps = 20/181 (11%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRK---DKSSYGFIHYFDRRSAAMAILSL 114
+VY+ N +V + L+E+FS G K++R +GF+ Y A A+ +
Sbjct: 192 NVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKHEDANKAVEEM 251
Query: 115 NGRHLFGQPIKVNWAYASGQR-------------EDTSGH--FNIFVGDLSPEVTDATLF 159
NG+ + G+ I V A +R E S + N+++ +L + D L
Sbjct: 252 NGKEISGKIIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLR 311
Query: 160 ACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT 219
FS + S + A+VM + GRS+GFGFV F + ++A A+ ++ G+ +GS+ + A
Sbjct: 312 KEFSPFGSITSAKVMLED--GRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQ 369
Query: 220 K 220
+
Sbjct: 370 R 370
Score = 38.9 bits (89), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRRSAAMAILSLN 115
++Y+ N+ + + L++ FS G + K++ +D S +GF+ + A A+ +N
Sbjct: 295 NLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMN 354
Query: 116 GRHLFGQPIKVNWAYASGQRE 136
GR + +P+ V A +R+
Sbjct: 355 GRIVGSKPLYVALAQRKEERK 375
>gi|410910988|ref|XP_003968972.1| PREDICTED: splicing factor 3B subunit 4-like [Takifugu rubripes]
Length = 397
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 63/194 (32%), Positives = 104/194 (53%), Gaps = 10/194 (5%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS-----YGFIHYFDRRSAAMAIL 112
+VYVG + +V+EPLL E+F GPV + KD+ + YGF+ + A AI
Sbjct: 14 TVYVGGLDEKVSEPLLWELFLQAGPVVNTHM-PKDRVTGQHQGYGFVEFLSEEDADYAIK 72
Query: 113 SLNGRHLFGQPIKVNWAYASGQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSC-SDA 171
+N L+G+PI+VN A A + D NIF+G+L PE+ + L+ FS +
Sbjct: 73 IMNMIKLYGKPIRVNKASAHNKNLDVGA--NIFIGNLDPEIDEKLLYDTFSAFGVILQTP 130
Query: 172 RVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSS 231
++M D TG S+G+ F++F + + +AI + G++L +R I ++A K E + S
Sbjct: 131 KIMRDPDTGNSKGYAFINFASFDASDAAIEAMNGQYLCNRPITVSYAFKKDSKGE-RHGS 189
Query: 232 DAKSVVELTNGSSE 245
A+ ++ N S+
Sbjct: 190 AAERLLAAQNPLSQ 203
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/216 (22%), Positives = 96/216 (44%), Gaps = 44/216 (20%)
Query: 131 ASGQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSF 190
A+G + + ++VG L +V++ L+ F + + D+ TG+ +G+GFV F
Sbjct: 2 AAGPISERNQDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEF 61
Query: 191 RNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKET 250
+++DA AI + L + IR N K + +N++ L G++
Sbjct: 62 LSEEDADYAIKIMNMIKLYGKPIRVN---KASAHNKN-----------LDVGAN------ 101
Query: 251 TNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRD------KGFGF 304
+++GNL PE+ + L+ F + G +++ ++ RD KG+ F
Sbjct: 102 --------------IFIGNLDPEIDEKLLYDTFSAFGV-ILQTPKIMRDPDTGNSKGYAF 146
Query: 305 VRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSK 340
+ +++ + AI+ N YL + + S+ K
Sbjct: 147 INFASFDASDAAIEAMN---GQYLCNRPITVSYAFK 179
>gi|403292062|ref|XP_003937076.1| PREDICTED: polyadenylate-binding protein 4 isoform 3 [Saimiri
boliviensis boliviensis]
Length = 630
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 130/281 (46%), Gaps = 47/281 (16%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIR----KDKSSYGFIHYFDRRSAAMAILS 113
S+YVG++H+ VTE +L E FS GPV ++ R + Y ++++ A A+ +
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 114 LNGRHLFGQPIKVNWAYASGQREDT---SGHFNIFVGDLSPEVTDATLFACFSVYPSCSD 170
+N + G+PI++ W+ QR+ + SG N+F+ +L + + L+ FS + +
Sbjct: 72 MNFDVIKGKPIRIMWS----QRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 171 ARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQS 230
+V+ D+ S+G+ FV F Q+ A AI + G L R++ G + ++
Sbjct: 128 CKVVCDENG--SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFV-------GRFKSRKE 178
Query: 231 SDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGV 290
+A EL + E +T VY+ N EV L F G +
Sbjct: 179 REA----ELGAKAKE----------------FTNVYIKNFGEEVDDESLKELFSQFGKTL 218
Query: 291 IEEVRVQRD-----KGFGFVRYSTHAEAALAIQMGNTTQSS 326
V+V RD KGFGFV Y H +A A++ N + S
Sbjct: 219 --SVKVMRDPNGKSKGFGFVSYEKHEDANKAVEEMNGKEIS 257
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 129/283 (45%), Gaps = 31/283 (10%)
Query: 52 DPSTCRS----VYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRR 105
DPS +S V++ N+ + L + FS+ G + CK++ + S Y F+H+ +
Sbjct: 90 DPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQE 149
Query: 106 SAAMAILSLNGRHLFGQPIKVNWAYASGQREDTSG-----HFNIFVGDLSPEVTDATLFA 160
+A AI +NG L + + V + +RE G N+++ + EV D +L
Sbjct: 150 AADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKE 209
Query: 161 CFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATK 220
FS + +VM D G+S+GFGFVS+ +DA A+ ++ GK + + I A K
Sbjct: 210 LFSQFGKTLSVKVMRD-PNGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRAQK 268
Query: 221 GAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLH 280
++Q+ EL + +E + Q +Y+ NL + L
Sbjct: 269 KV----ERQA-------ELKRKFEQLKQERISRY------QGVNLYIKNLDDTIDDEKLR 311
Query: 281 RHFHSLGAGVIEEVRVQ--RDKGFGFVRYSTHAEAALAIQMGN 321
+ F G+ +V ++ R KGFGFV +S+ EA A+ N
Sbjct: 312 KEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMN 354
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 88/181 (48%), Gaps = 20/181 (11%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRK---DKSSYGFIHYFDRRSAAMAILSL 114
+VY+ N +V + L+E+FS G K++R +GF+ Y A A+ +
Sbjct: 192 NVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKHEDANKAVEEM 251
Query: 115 NGRHLFGQPIKVNWAYASGQR-------------EDTSGH--FNIFVGDLSPEVTDATLF 159
NG+ + G+ I V A +R E S + N+++ +L + D L
Sbjct: 252 NGKEISGKIIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLR 311
Query: 160 ACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT 219
FS + S + A+VM + GRS+GFGFV F + ++A A+ ++ G+ +GS+ + A
Sbjct: 312 KEFSPFGSITSAKVMLED--GRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQ 369
Query: 220 K 220
+
Sbjct: 370 R 370
Score = 38.5 bits (88), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRRSAAMAILSLN 115
++Y+ N+ + + L++ FS G + K++ +D S +GF+ + A A+ +N
Sbjct: 295 NLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMN 354
Query: 116 GRHLFGQPIKVNWAYASGQRE 136
GR + +P+ V A +R+
Sbjct: 355 GRIVGSKPLYVALAQRKEERK 375
>gi|332248413|ref|XP_003273358.1| PREDICTED: polyadenylate-binding protein 4 isoform 1 [Nomascus
leucogenys]
gi|355557859|gb|EHH14639.1| hypothetical protein EGK_00600 [Macaca mulatta]
gi|383411103|gb|AFH28765.1| polyadenylate-binding protein 4 isoform 1 [Macaca mulatta]
gi|384941238|gb|AFI34224.1| polyadenylate-binding protein 4 isoform 1 [Macaca mulatta]
Length = 660
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 130/281 (46%), Gaps = 47/281 (16%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIR----KDKSSYGFIHYFDRRSAAMAILS 113
S+YVG++H+ VTE +L E FS GPV ++ R + Y ++++ A A+ +
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 114 LNGRHLFGQPIKVNWAYASGQREDT---SGHFNIFVGDLSPEVTDATLFACFSVYPSCSD 170
+N + G+PI++ W+ QR+ + SG N+F+ +L + + L+ FS + +
Sbjct: 72 MNFDVIKGKPIRIMWS----QRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 171 ARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQS 230
+V+ D+ S+G+ FV F Q+ A AI + G L R++ G + ++
Sbjct: 128 CKVVCDENG--SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFV-------GRFKSRKE 178
Query: 231 SDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGV 290
+A EL + E +T VY+ N EV L F G +
Sbjct: 179 REA----ELGAKAKE----------------FTNVYIKNFGEEVDDESLKELFSQFGKTL 218
Query: 291 IEEVRVQRD-----KGFGFVRYSTHAEAALAIQMGNTTQSS 326
V+V RD KGFGFV Y H +A A++ N + S
Sbjct: 219 --SVKVMRDPSGKSKGFGFVSYEKHEDANKAVEEMNGKEIS 257
Score = 101 bits (251), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 130/283 (45%), Gaps = 31/283 (10%)
Query: 52 DPSTCRS----VYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRR 105
DPS +S V++ N+ + L + FS+ G + CK++ + S Y F+H+ +
Sbjct: 90 DPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQE 149
Query: 106 SAAMAILSLNGRHLFGQPIKVNWAYASGQREDTSG-----HFNIFVGDLSPEVTDATLFA 160
+A AI +NG L + + V + +RE G N+++ + EV D +L
Sbjct: 150 AADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKE 209
Query: 161 CFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATK 220
FS + +VM D +G+S+GFGFVS+ +DA A+ ++ GK + + I A K
Sbjct: 210 LFSQFGKTLSVKVMRD-PSGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRAQK 268
Query: 221 GAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLH 280
++Q+ EL + +E + Q +Y+ NL + L
Sbjct: 269 KV----ERQA-------ELKRKFEQLKQERISRY------QGVNLYIKNLDDTIDDEKLR 311
Query: 281 RHFHSLGAGVIEEVRVQ--RDKGFGFVRYSTHAEAALAIQMGN 321
+ F G+ +V ++ R KGFGFV +S+ EA A+ N
Sbjct: 312 KEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMN 354
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 88/181 (48%), Gaps = 20/181 (11%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRK---DKSSYGFIHYFDRRSAAMAILSL 114
+VY+ N +V + L+E+FS G K++R +GF+ Y A A+ +
Sbjct: 192 NVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGKSKGFGFVSYEKHEDANKAVEEM 251
Query: 115 NGRHLFGQPIKVNWAYASGQR-------------EDTSGH--FNIFVGDLSPEVTDATLF 159
NG+ + G+ I V A +R E S + N+++ +L + D L
Sbjct: 252 NGKEISGKIIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLR 311
Query: 160 ACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT 219
FS + S + A+VM + GRS+GFGFV F + ++A A+ ++ G+ +GS+ + A
Sbjct: 312 KEFSPFGSITSAKVMLED--GRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQ 369
Query: 220 K 220
+
Sbjct: 370 R 370
Score = 38.9 bits (89), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRRSAAMAILSLN 115
++Y+ N+ + + L++ FS G + K++ +D S +GF+ + A A+ +N
Sbjct: 295 NLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMN 354
Query: 116 GRHLFGQPIKVNWAYASGQRE 136
GR + +P+ V A +R+
Sbjct: 355 GRIVGSKPLYVALAQRKEERK 375
>gi|332248415|ref|XP_003273359.1| PREDICTED: polyadenylate-binding protein 4 isoform 2 [Nomascus
leucogenys]
gi|383411101|gb|AFH28764.1| polyadenylate-binding protein 4 isoform 2 [Macaca mulatta]
gi|384941236|gb|AFI34223.1| polyadenylate-binding protein 4 isoform 2 [Macaca mulatta]
Length = 644
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 130/281 (46%), Gaps = 47/281 (16%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIR----KDKSSYGFIHYFDRRSAAMAILS 113
S+YVG++H+ VTE +L E FS GPV ++ R + Y ++++ A A+ +
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 114 LNGRHLFGQPIKVNWAYASGQREDT---SGHFNIFVGDLSPEVTDATLFACFSVYPSCSD 170
+N + G+PI++ W+ QR+ + SG N+F+ +L + + L+ FS + +
Sbjct: 72 MNFDVIKGKPIRIMWS----QRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 171 ARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQS 230
+V+ D+ S+G+ FV F Q+ A AI + G L R++ G + ++
Sbjct: 128 CKVVCDENG--SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFV-------GRFKSRKE 178
Query: 231 SDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGV 290
+A EL + E +T VY+ N EV L F G +
Sbjct: 179 REA----ELGAKAKE----------------FTNVYIKNFGEEVDDESLKELFSQFGKTL 218
Query: 291 IEEVRVQRD-----KGFGFVRYSTHAEAALAIQMGNTTQSS 326
V+V RD KGFGFV Y H +A A++ N + S
Sbjct: 219 --SVKVMRDPSGKSKGFGFVSYEKHEDANKAVEEMNGKEIS 257
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 130/283 (45%), Gaps = 31/283 (10%)
Query: 52 DPSTCRS----VYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRR 105
DPS +S V++ N+ + L + FS+ G + CK++ + S Y F+H+ +
Sbjct: 90 DPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQE 149
Query: 106 SAAMAILSLNGRHLFGQPIKVNWAYASGQREDTSG-----HFNIFVGDLSPEVTDATLFA 160
+A AI +NG L + + V + +RE G N+++ + EV D +L
Sbjct: 150 AADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKE 209
Query: 161 CFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATK 220
FS + +VM D +G+S+GFGFVS+ +DA A+ ++ GK + + I A K
Sbjct: 210 LFSQFGKTLSVKVMRD-PSGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRAQK 268
Query: 221 GAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLH 280
++Q+ EL + +E + Q +Y+ NL + L
Sbjct: 269 KV----ERQA-------ELKRKFEQLKQERISRY------QGVNLYIKNLDDTIDDEKLR 311
Query: 281 RHFHSLGAGVIEEVRVQ--RDKGFGFVRYSTHAEAALAIQMGN 321
+ F G+ +V ++ R KGFGFV +S+ EA A+ N
Sbjct: 312 KEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMN 354
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 88/181 (48%), Gaps = 20/181 (11%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRK---DKSSYGFIHYFDRRSAAMAILSL 114
+VY+ N +V + L+E+FS G K++R +GF+ Y A A+ +
Sbjct: 192 NVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGKSKGFGFVSYEKHEDANKAVEEM 251
Query: 115 NGRHLFGQPIKVNWAYASGQR-------------EDTSGH--FNIFVGDLSPEVTDATLF 159
NG+ + G+ I V A +R E S + N+++ +L + D L
Sbjct: 252 NGKEISGKIIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLR 311
Query: 160 ACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT 219
FS + S + A+VM + GRS+GFGFV F + ++A A+ ++ G+ +GS+ + A
Sbjct: 312 KEFSPFGSITSAKVMLED--GRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQ 369
Query: 220 K 220
+
Sbjct: 370 R 370
Score = 38.9 bits (89), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRRSAAMAILSLN 115
++Y+ N+ + + L++ FS G + K++ +D S +GF+ + A A+ +N
Sbjct: 295 NLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMN 354
Query: 116 GRHLFGQPIKVNWAYASGQRE 136
GR + +P+ V A +R+
Sbjct: 355 GRIVGSKPLYVALAQRKEERK 375
>gi|403292060|ref|XP_003937075.1| PREDICTED: polyadenylate-binding protein 4 isoform 2 [Saimiri
boliviensis boliviensis]
Length = 643
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 130/281 (46%), Gaps = 47/281 (16%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIR----KDKSSYGFIHYFDRRSAAMAILS 113
S+YVG++H+ VTE +L E FS GPV ++ R + Y ++++ A A+ +
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 114 LNGRHLFGQPIKVNWAYASGQREDT---SGHFNIFVGDLSPEVTDATLFACFSVYPSCSD 170
+N + G+PI++ W+ QR+ + SG N+F+ +L + + L+ FS + +
Sbjct: 72 MNFDVIKGKPIRIMWS----QRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 171 ARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQS 230
+V+ D+ S+G+ FV F Q+ A AI + G L R++ G + ++
Sbjct: 128 CKVVCDENG--SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFV-------GRFKSRKE 178
Query: 231 SDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGV 290
+A EL + E +T VY+ N EV L F G +
Sbjct: 179 REA----ELGAKAKE----------------FTNVYIKNFGEEVDDESLKELFSQFGKTL 218
Query: 291 IEEVRVQRD-----KGFGFVRYSTHAEAALAIQMGNTTQSS 326
V+V RD KGFGFV Y H +A A++ N + S
Sbjct: 219 --SVKVMRDPNGKSKGFGFVSYEKHEDANKAVEEMNGKEIS 257
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 129/283 (45%), Gaps = 31/283 (10%)
Query: 52 DPSTCRS----VYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRR 105
DPS +S V++ N+ + L + FS+ G + CK++ + S Y F+H+ +
Sbjct: 90 DPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQE 149
Query: 106 SAAMAILSLNGRHLFGQPIKVNWAYASGQREDTSG-----HFNIFVGDLSPEVTDATLFA 160
+A AI +NG L + + V + +RE G N+++ + EV D +L
Sbjct: 150 AADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKE 209
Query: 161 CFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATK 220
FS + +VM D G+S+GFGFVS+ +DA A+ ++ GK + + I A K
Sbjct: 210 LFSQFGKTLSVKVMRD-PNGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRAQK 268
Query: 221 GAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLH 280
++Q+ EL + +E + Q +Y+ NL + L
Sbjct: 269 KV----ERQA-------ELKRKFEQLKQERISRY------QGVNLYIKNLDDTIDDEKLR 311
Query: 281 RHFHSLGAGVIEEVRVQ--RDKGFGFVRYSTHAEAALAIQMGN 321
+ F G+ +V ++ R KGFGFV +S+ EA A+ N
Sbjct: 312 KEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMN 354
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 88/181 (48%), Gaps = 20/181 (11%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRK---DKSSYGFIHYFDRRSAAMAILSL 114
+VY+ N +V + L+E+FS G K++R +GF+ Y A A+ +
Sbjct: 192 NVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKHEDANKAVEEM 251
Query: 115 NGRHLFGQPIKVNWAYASGQR-------------EDTSGH--FNIFVGDLSPEVTDATLF 159
NG+ + G+ I V A +R E S + N+++ +L + D L
Sbjct: 252 NGKEISGKIIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLR 311
Query: 160 ACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT 219
FS + S + A+VM + GRS+GFGFV F + ++A A+ ++ G+ +GS+ + A
Sbjct: 312 KEFSPFGSITSAKVMLED--GRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQ 369
Query: 220 K 220
+
Sbjct: 370 R 370
Score = 38.9 bits (89), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRRSAAMAILSLN 115
++Y+ N+ + + L++ FS G + K++ +D S +GF+ + A A+ +N
Sbjct: 295 NLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMN 354
Query: 116 GRHLFGQPIKVNWAYASGQRE 136
GR + +P+ V A +R+
Sbjct: 355 GRIVGSKPLYVALAQRKEERK 375
>gi|302693014|ref|XP_003036186.1| hypothetical protein SCHCODRAFT_66185 [Schizophyllum commune H4-8]
gi|300109882|gb|EFJ01284.1| hypothetical protein SCHCODRAFT_66185 [Schizophyllum commune H4-8]
Length = 632
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 134/278 (48%), Gaps = 34/278 (12%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS---YGFIHYFDRRSAAMAILSL 114
++++ N+ Q+ L + F++ G V CK+ + + YGF+HY +A AI ++
Sbjct: 135 NIFIKNLDEQIDNKALHDTFAAFGNVLSCKVATDEHGNSKGYGFVHYETAEAAENAIKNV 194
Query: 115 NGRHLFGQPIKVNWAYASGQR----EDTSGHF-NIFVGDLSPEVTDATLFACFSVYPSCS 169
NG L + + V + +R ++ F N+++ ++ PEVTD A F + +
Sbjct: 195 NGMLLNDKKVYVGHHISRKERQSKIDEMKAQFTNLYIKNIDPEVTDEEFEALFREQGNVT 254
Query: 170 DARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQ 229
+ + D++ GRSRGFGFV++ ++AQ A+++L K R++ + A K A E+ +
Sbjct: 255 SSVIQRDEE-GRSRGFGFVNYETHEEAQKAVDNLNDKDFHGRKLFVSRAQKKAEREEELR 313
Query: 230 SSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAG 289
+ ++ +E + Q +YV NL +V L F G
Sbjct: 314 KAHEQARLEKLSKY-----------------QGLNLYVKNLDDDVDDEKLRAEFEPF--G 354
Query: 290 VIEEVRVQRD-----KGFGFVRYSTHAEAALAI-QMGN 321
I +V RD KGFGFV YS+ EA+ A+ +M N
Sbjct: 355 TITSAKVMRDDKGVSKGFGFVCYSSPEEASKAVAEMNN 392
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 132/287 (45%), Gaps = 47/287 (16%)
Query: 41 PIPSGNLPPGFDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIR----KDKSSY 96
P+ +G P PS S+YVG + VTE +L E+F+ GPV ++ R + Y
Sbjct: 35 PVSTGAGSP---PSA--SLYVGELDPTVTEAMLFEIFNMIGPVASIRVCRDAVTRRSLGY 89
Query: 97 GFIHYFDRRSAAMAILSLNGRHLFGQPIKVNWAYASGQRE---DTSGHFNIFVGDLSPEV 153
+++Y + A+ LN + +P ++ W+ QR+ +G NIF+ +L ++
Sbjct: 90 AYVNYLNAADGERALEQLNYSLIKNRPCRIMWS----QRDPALRKTGQGNIFIKNLDEQI 145
Query: 154 TDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQI 213
+ L F+ + + +V D+ G S+G+GFV + + A++AI ++ G L +++
Sbjct: 146 DNKALHDTFAAFGNVLSCKVATDEH-GNSKGYGFVHYETAEAAENAIKNVNGMLLNDKKV 204
Query: 214 RCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPE 273
G++ ++ +K E Q+T +Y+ N+ PE
Sbjct: 205 YV-------GHHISRKERQSK--------------------IDEMKAQFTNLYIKNIDPE 237
Query: 274 VTQLDLHRHFHSLG---AGVIEEVRVQRDKGFGFVRYSTHAEAALAI 317
VT + F G + VI+ R +GFGFV Y TH EA A+
Sbjct: 238 VTDEEFEALFREQGNVTSSVIQRDEEGRSRGFGFVNYETHEEAQKAV 284
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 90/181 (49%), Gaps = 19/181 (10%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS---YGFIHYFDRRSAAMAILSL 114
++Y+ NI +VT+ + +F G V + R ++ +GF++Y A A+ +L
Sbjct: 228 NLYIKNIDPEVTDEEFEALFREQGNVTSSVIQRDEEGRSRGFGFVNYETHEEAQKAVDNL 287
Query: 115 NGRHLFGQPIKVNWAYASGQREDT--SGH-------------FNIFVGDLSPEVTDATLF 159
N + G+ + V+ A +RE+ H N++V +L +V D L
Sbjct: 288 NDKDFHGRKLFVSRAQKKAEREEELRKAHEQARLEKLSKYQGLNLYVKNLDDDVDDEKLR 347
Query: 160 ACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT 219
A F + + + A+VM D K G S+GFGFV + + ++A A+ ++ K +GS+ + + A
Sbjct: 348 AEFEPFGTITSAKVMRDDK-GVSKGFGFVCYSSPEEASKAVAEMNNKMIGSKPLYVSHAQ 406
Query: 220 K 220
+
Sbjct: 407 R 407
>gi|149693775|ref|XP_001503500.1| PREDICTED: polyadenylate-binding protein 4 isoform 1 [Equus
caballus]
Length = 644
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 130/281 (46%), Gaps = 47/281 (16%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIR----KDKSSYGFIHYFDRRSAAMAILS 113
S+YVG++H+ VTE +L E FS GPV ++ R + Y ++++ A A+ +
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 114 LNGRHLFGQPIKVNWAYASGQREDT---SGHFNIFVGDLSPEVTDATLFACFSVYPSCSD 170
+N + G+PI++ W+ QR+ + SG N+F+ +L + + L+ FS + +
Sbjct: 72 MNFDVIKGKPIRIMWS----QRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 171 ARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQS 230
+V+ D+ S+G+ FV F Q+ A AI + G L R++ G + ++
Sbjct: 128 CKVVCDENG--SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFV-------GRFKSRKE 178
Query: 231 SDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGV 290
+A EL + E +T VY+ N EV L F G +
Sbjct: 179 REA----ELGAKAKE----------------FTNVYIKNFGEEVDDESLKELFSQFGKTL 218
Query: 291 IEEVRVQRD-----KGFGFVRYSTHAEAALAIQMGNTTQSS 326
V+V RD KGFGFV Y H +A A++ N + S
Sbjct: 219 --SVKVMRDPSGKSKGFGFVSYEKHEDANKAVEEMNGKEIS 257
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 130/283 (45%), Gaps = 31/283 (10%)
Query: 52 DPSTCRS----VYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRR 105
DPS +S V++ N+ + L + FS+ G + CK++ + S Y F+H+ +
Sbjct: 90 DPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQE 149
Query: 106 SAAMAILSLNGRHLFGQPIKVNWAYASGQREDTSG-----HFNIFVGDLSPEVTDATLFA 160
+A AI +NG L + + V + +RE G N+++ + EV D +L
Sbjct: 150 AADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKE 209
Query: 161 CFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATK 220
FS + +VM D +G+S+GFGFVS+ +DA A+ ++ GK + + I A K
Sbjct: 210 LFSQFGKTLSVKVMRD-PSGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKVIFVGRAQK 268
Query: 221 GAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLH 280
++Q+ EL + +E + Q +Y+ NL + L
Sbjct: 269 KV----ERQA-------ELKRKFEQLKQERISRY------QGVNLYIKNLDDTIDDEKLR 311
Query: 281 RHFHSLGAGVIEEVRVQ--RDKGFGFVRYSTHAEAALAIQMGN 321
+ F G+ +V ++ R KGFGFV +S+ EA A+ N
Sbjct: 312 KEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMN 354
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 88/181 (48%), Gaps = 20/181 (11%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRK---DKSSYGFIHYFDRRSAAMAILSL 114
+VY+ N +V + L+E+FS G K++R +GF+ Y A A+ +
Sbjct: 192 NVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGKSKGFGFVSYEKHEDANKAVEEM 251
Query: 115 NGRHLFGQPIKVNWAYASGQR-------------EDTSGH--FNIFVGDLSPEVTDATLF 159
NG+ + G+ I V A +R E S + N+++ +L + D L
Sbjct: 252 NGKEISGKVIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLR 311
Query: 160 ACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT 219
FS + S + A+VM + GRS+GFGFV F + ++A A+ ++ G+ +GS+ + A
Sbjct: 312 KEFSPFGSITSAKVMLED--GRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQ 369
Query: 220 K 220
+
Sbjct: 370 R 370
Score = 38.9 bits (89), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRRSAAMAILSLN 115
++Y+ N+ + + L++ FS G + K++ +D S +GF+ + A A+ +N
Sbjct: 295 NLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMN 354
Query: 116 GRHLFGQPIKVNWAYASGQRE 136
GR + +P+ V A +R+
Sbjct: 355 GRIVGSKPLYVALAQRKEERK 375
>gi|410966842|ref|XP_003989936.1| PREDICTED: polyadenylate-binding protein 4 isoform 2 [Felis catus]
Length = 644
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 130/281 (46%), Gaps = 47/281 (16%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIR----KDKSSYGFIHYFDRRSAAMAILS 113
S+YVG++H+ VTE +L E FS GPV ++ R + Y ++++ A A+ +
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 114 LNGRHLFGQPIKVNWAYASGQREDT---SGHFNIFVGDLSPEVTDATLFACFSVYPSCSD 170
+N + G+PI++ W+ QR+ + SG N+F+ +L + + L+ FS + +
Sbjct: 72 MNFDVIKGKPIRIMWS----QRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 171 ARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQS 230
+V+ D+ S+G+ FV F Q+ A AI + G L R++ G + ++
Sbjct: 128 CKVVCDENG--SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFV-------GRFKSRKE 178
Query: 231 SDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGV 290
+A EL + E +T VY+ N EV L F G +
Sbjct: 179 REA----ELGAKAKE----------------FTNVYIKNFGEEVDDESLKELFSQFGKTL 218
Query: 291 IEEVRVQRD-----KGFGFVRYSTHAEAALAIQMGNTTQSS 326
V+V RD KGFGFV Y H +A A++ N + S
Sbjct: 219 --SVKVMRDPSGKSKGFGFVSYEKHEDANKAVEEMNGKEIS 257
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 130/283 (45%), Gaps = 31/283 (10%)
Query: 52 DPSTCRS----VYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRR 105
DPS +S V++ N+ + L + FS+ G + CK++ + S Y F+H+ +
Sbjct: 90 DPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQE 149
Query: 106 SAAMAILSLNGRHLFGQPIKVNWAYASGQREDTSG-----HFNIFVGDLSPEVTDATLFA 160
+A AI +NG L + + V + +RE G N+++ + EV D +L
Sbjct: 150 AADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKE 209
Query: 161 CFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATK 220
FS + +VM D +G+S+GFGFVS+ +DA A+ ++ GK + + I A K
Sbjct: 210 LFSQFGKTLSVKVMRD-PSGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKVIFVGRAQK 268
Query: 221 GAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLH 280
++Q+ EL + +E + Q +Y+ NL + L
Sbjct: 269 KV----ERQA-------ELKRKFEQLKQERISRY------QGVNLYIKNLDDTIDDEKLR 311
Query: 281 RHFHSLGAGVIEEVRVQ--RDKGFGFVRYSTHAEAALAIQMGN 321
+ F G+ +V ++ R KGFGFV +S+ EA A+ N
Sbjct: 312 KEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMN 354
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 88/181 (48%), Gaps = 20/181 (11%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRK---DKSSYGFIHYFDRRSAAMAILSL 114
+VY+ N +V + L+E+FS G K++R +GF+ Y A A+ +
Sbjct: 192 NVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGKSKGFGFVSYEKHEDANKAVEEM 251
Query: 115 NGRHLFGQPIKVNWAYASGQR-------------EDTSGH--FNIFVGDLSPEVTDATLF 159
NG+ + G+ I V A +R E S + N+++ +L + D L
Sbjct: 252 NGKEISGKVIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLR 311
Query: 160 ACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT 219
FS + S + A+VM + GRS+GFGFV F + ++A A+ ++ G+ +GS+ + A
Sbjct: 312 KEFSPFGSITSAKVMLED--GRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQ 369
Query: 220 K 220
+
Sbjct: 370 R 370
Score = 38.9 bits (89), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRRSAAMAILSLN 115
++Y+ N+ + + L++ FS G + K++ +D S +GF+ + A A+ +N
Sbjct: 295 NLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMN 354
Query: 116 GRHLFGQPIKVNWAYASGQRE 136
GR + +P+ V A +R+
Sbjct: 355 GRIVGSKPLYVALAQRKEERK 375
>gi|351713677|gb|EHB16596.1| Polyadenylate-binding protein 4 [Heterocephalus glaber]
Length = 661
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 130/281 (46%), Gaps = 47/281 (16%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIR----KDKSSYGFIHYFDRRSAAMAILS 113
S+YVG++H+ VTE +L E FS GPV ++ R + Y ++++ A A+ +
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 114 LNGRHLFGQPIKVNWAYASGQREDT---SGHFNIFVGDLSPEVTDATLFACFSVYPSCSD 170
+N + G+PI++ W+ QR+ + SG N+F+ +L + + L+ FS + +
Sbjct: 72 MNFDVIKGKPIRIMWS----QRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 171 ARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQS 230
+V+ D+ S+G+ FV F Q+ A AI + G L R++ G + ++
Sbjct: 128 CKVVCDENG--SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFV-------GRFKSRKE 178
Query: 231 SDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGV 290
+A EL + E +T VY+ N EV L F G +
Sbjct: 179 REA----ELGAKAKE----------------FTNVYIKNFGEEVDDESLKELFSQFGKTL 218
Query: 291 IEEVRVQRD-----KGFGFVRYSTHAEAALAIQMGNTTQSS 326
V+V RD KGFGFV Y H +A A++ N + S
Sbjct: 219 --SVKVMRDPSGKSKGFGFVSYEKHEDANKAVEEMNGKEIS 257
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 130/283 (45%), Gaps = 31/283 (10%)
Query: 52 DPSTCRS----VYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRR 105
DPS +S V++ N+ + L + FS+ G + CK++ + S Y F+H+ +
Sbjct: 90 DPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQE 149
Query: 106 SAAMAILSLNGRHLFGQPIKVNWAYASGQREDTSG-----HFNIFVGDLSPEVTDATLFA 160
+A AI +NG L + + V + +RE G N+++ + EV D +L
Sbjct: 150 AADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKE 209
Query: 161 CFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATK 220
FS + +VM D +G+S+GFGFVS+ +DA A+ ++ GK + + I A K
Sbjct: 210 LFSQFGKTLSVKVMRD-PSGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKVIFVGRAQK 268
Query: 221 GAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLH 280
++Q+ EL + +E + Q +Y+ NL + L
Sbjct: 269 KV----ERQA-------ELKRKFEQLKQERISRY------QGVNLYIKNLDDTIDDEKLR 311
Query: 281 RHFHSLGAGVIEEVRVQ--RDKGFGFVRYSTHAEAALAIQMGN 321
+ F G+ +V ++ R KGFGFV +S+ EA A+ N
Sbjct: 312 KEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMN 354
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 88/181 (48%), Gaps = 20/181 (11%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRK---DKSSYGFIHYFDRRSAAMAILSL 114
+VY+ N +V + L+E+FS G K++R +GF+ Y A A+ +
Sbjct: 192 NVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGKSKGFGFVSYEKHEDANKAVEEM 251
Query: 115 NGRHLFGQPIKVNWAYASGQR-------------EDTSGH--FNIFVGDLSPEVTDATLF 159
NG+ + G+ I V A +R E S + N+++ +L + D L
Sbjct: 252 NGKEISGKVIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLR 311
Query: 160 ACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT 219
FS + S + A+VM + GRS+GFGFV F + ++A A+ ++ G+ +GS+ + A
Sbjct: 312 KEFSPFGSITSAKVMLED--GRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQ 369
Query: 220 K 220
+
Sbjct: 370 R 370
Score = 38.9 bits (89), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRRSAAMAILSLN 115
++Y+ N+ + + L++ FS G + K++ +D S +GF+ + A A+ +N
Sbjct: 295 NLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMN 354
Query: 116 GRHLFGQPIKVNWAYASGQRE 136
GR + +P+ V A +R+
Sbjct: 355 GRIVGSKPLYVALAQRKEERK 375
>gi|119627673|gb|EAX07268.1| poly(A) binding protein, cytoplasmic 4 (inducible form), isoform
CRA_h [Homo sapiens]
Length = 661
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 130/281 (46%), Gaps = 47/281 (16%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIR----KDKSSYGFIHYFDRRSAAMAILS 113
S+YVG++H+ VTE +L E FS GPV ++ R + Y ++++ A A+ +
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 114 LNGRHLFGQPIKVNWAYASGQREDT---SGHFNIFVGDLSPEVTDATLFACFSVYPSCSD 170
+N + G+PI++ W+ QR+ + SG N+F+ +L + + L+ FS + +
Sbjct: 72 MNFDVIKGKPIRIMWS----QRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 171 ARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQS 230
+V+ D+ S+G+ FV F Q+ A AI + G L R++ G + ++
Sbjct: 128 CKVVCDENG--SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFV-------GRFKSRKE 178
Query: 231 SDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGV 290
+A EL + E +T VY+ N EV L F G +
Sbjct: 179 REA----ELGAKAKE----------------FTNVYIKNFGEEVDDESLKELFSQFGKTL 218
Query: 291 IEEVRVQRD-----KGFGFVRYSTHAEAALAIQMGNTTQSS 326
V+V RD KGFGFV Y H +A A++ N + S
Sbjct: 219 --SVKVMRDPNGKSKGFGFVSYEKHEDANKAVEEMNGKEIS 257
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 129/283 (45%), Gaps = 31/283 (10%)
Query: 52 DPSTCRS----VYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRR 105
DPS +S V++ N+ + L + FS+ G + CK++ + S Y F+H+ +
Sbjct: 90 DPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQE 149
Query: 106 SAAMAILSLNGRHLFGQPIKVNWAYASGQREDTSG-----HFNIFVGDLSPEVTDATLFA 160
+A AI +NG L + + V + +RE G N+++ + EV D +L
Sbjct: 150 AADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKE 209
Query: 161 CFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATK 220
FS + +VM D G+S+GFGFVS+ +DA A+ ++ GK + + I A K
Sbjct: 210 LFSQFGKTLSVKVMRD-PNGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRAQK 268
Query: 221 GAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLH 280
++Q+ EL + +E + Q +Y+ NL + L
Sbjct: 269 KV----ERQA-------ELKRKFEQLKQERISRY------QGVNLYIKNLDDTIDDEKLR 311
Query: 281 RHFHSLGAGVIEEVRVQ--RDKGFGFVRYSTHAEAALAIQMGN 321
+ F G+ +V ++ R KGFGFV +S+ EA A+ N
Sbjct: 312 KEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMN 354
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 88/181 (48%), Gaps = 20/181 (11%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRK---DKSSYGFIHYFDRRSAAMAILSL 114
+VY+ N +V + L+E+FS G K++R +GF+ Y A A+ +
Sbjct: 192 NVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKHEDANKAVEEM 251
Query: 115 NGRHLFGQPIKVNWAYASGQR-------------EDTSGH--FNIFVGDLSPEVTDATLF 159
NG+ + G+ I V A +R E S + N+++ +L + D L
Sbjct: 252 NGKEISGKIIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLR 311
Query: 160 ACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT 219
FS + S + A+VM + GRS+GFGFV F + ++A A+ ++ G+ +GS+ + A
Sbjct: 312 KEFSPFGSITSAKVMLED--GRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQ 369
Query: 220 K 220
+
Sbjct: 370 R 370
Score = 38.9 bits (89), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRRSAAMAILSLN 115
++Y+ N+ + + L++ FS G + K++ +D S +GF+ + A A+ +N
Sbjct: 295 NLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMN 354
Query: 116 GRHLFGQPIKVNWAYASGQRE 136
GR + +P+ V A +R+
Sbjct: 355 GRIVGSKPLYVALAQRKEERK 375
>gi|395853070|ref|XP_003799043.1| PREDICTED: polyadenylate-binding protein 4 isoform 2 [Otolemur
garnettii]
Length = 646
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 130/281 (46%), Gaps = 47/281 (16%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIR----KDKSSYGFIHYFDRRSAAMAILS 113
S+YVG++H+ VTE +L E FS GPV ++ R + Y ++++ A A+ +
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 114 LNGRHLFGQPIKVNWAYASGQREDT---SGHFNIFVGDLSPEVTDATLFACFSVYPSCSD 170
+N + G+PI++ W+ QR+ + SG N+F+ +L + + L+ FS + +
Sbjct: 72 MNFDVIKGKPIRIMWS----QRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 171 ARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQS 230
+V+ D+ S+G+ FV F Q+ A AI + G L R++ G + ++
Sbjct: 128 CKVVCDENG--SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFV-------GRFKSRKE 178
Query: 231 SDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGV 290
+A EL + E +T VY+ N EV L F G +
Sbjct: 179 REA----ELGAKAKE----------------FTNVYIKNFGEEVDDESLKELFSQFGKTL 218
Query: 291 IEEVRVQRD-----KGFGFVRYSTHAEAALAIQMGNTTQSS 326
V+V RD KGFGFV Y H +A A++ N + S
Sbjct: 219 --SVKVMRDPSGKSKGFGFVSYEKHEDANKAVEEMNGKEIS 257
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 130/283 (45%), Gaps = 31/283 (10%)
Query: 52 DPSTCRS----VYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRR 105
DPS +S V++ N+ + L + FS+ G + CK++ + S Y F+H+ +
Sbjct: 90 DPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQE 149
Query: 106 SAAMAILSLNGRHLFGQPIKVNWAYASGQREDTSG-----HFNIFVGDLSPEVTDATLFA 160
+A AI +NG L + + V + +RE G N+++ + EV D +L
Sbjct: 150 AADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKE 209
Query: 161 CFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATK 220
FS + +VM D +G+S+GFGFVS+ +DA A+ ++ GK + + I A K
Sbjct: 210 LFSQFGKTLSVKVMRD-PSGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKVIFVGRAQK 268
Query: 221 GAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLH 280
++Q+ EL + +E + Q +Y+ NL + L
Sbjct: 269 KV----ERQA-------ELKRKFEQLKQERISRY------QGVNLYIKNLDDTIDDEKLR 311
Query: 281 RHFHSLGAGVIEEVRVQ--RDKGFGFVRYSTHAEAALAIQMGN 321
+ F G+ +V ++ R KGFGFV +S+ EA A+ N
Sbjct: 312 KEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMN 354
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 88/181 (48%), Gaps = 20/181 (11%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRK---DKSSYGFIHYFDRRSAAMAILSL 114
+VY+ N +V + L+E+FS G K++R +GF+ Y A A+ +
Sbjct: 192 NVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGKSKGFGFVSYEKHEDANKAVEEM 251
Query: 115 NGRHLFGQPIKVNWAYASGQR-------------EDTSGH--FNIFVGDLSPEVTDATLF 159
NG+ + G+ I V A +R E S + N+++ +L + D L
Sbjct: 252 NGKEISGKVIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLR 311
Query: 160 ACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT 219
FS + S + A+VM + GRS+GFGFV F + ++A A+ ++ G+ +GS+ + A
Sbjct: 312 KEFSPFGSITSAKVMLED--GRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQ 369
Query: 220 K 220
+
Sbjct: 370 R 370
Score = 38.9 bits (89), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRRSAAMAILSLN 115
++Y+ N+ + + L++ FS G + K++ +D S +GF+ + A A+ +N
Sbjct: 295 NLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMN 354
Query: 116 GRHLFGQPIKVNWAYASGQRE 136
GR + +P+ V A +R+
Sbjct: 355 GRIVGSKPLYVALAQRKEERK 375
>gi|324512478|gb|ADY45169.1| Splicing factor 3B subunit 4 [Ascaris suum]
Length = 399
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 59/168 (35%), Positives = 94/168 (55%), Gaps = 7/168 (4%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKL----IRKDKSSYGFIHYFDRRSAAMAILS 113
++YVG + +VT+ +L E+F +GPV + + +GF+ + A AI
Sbjct: 14 TIYVGGLDEKVTDAILWELFVQSGPVVSVNMPKDRVTNSHQGFGFVEFMGEEDADYAIKI 73
Query: 114 LNGRHLFGQPIKVNWAYASGQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDA-R 172
+N L+G+PIKVN A A + D NIFVG+L PEV + LF FS + +
Sbjct: 74 MNMIKLYGKPIKVNKASAHEKNMDVGA--NIFVGNLDPEVDEKLLFDTFSAFGVILQVPK 131
Query: 173 VMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATK 220
+M D +TG S+GF FV+F + + + SAI ++G++L +R I ++A K
Sbjct: 132 IMRDAETGNSKGFAFVNFASFEASDSAIEAMSGQFLCNRAITVSYAFK 179
>gi|444706907|gb|ELW48224.1| Polyadenylate-binding protein 4 [Tupaia chinensis]
Length = 692
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 130/281 (46%), Gaps = 47/281 (16%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIR----KDKSSYGFIHYFDRRSAAMAILS 113
S+YVG++H+ VTE +L E FS GPV ++ R + Y ++++ A A+ +
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 114 LNGRHLFGQPIKVNWAYASGQREDT---SGHFNIFVGDLSPEVTDATLFACFSVYPSCSD 170
+N + G+PI++ W+ QR+ + SG N+F+ +L + + L+ FS + +
Sbjct: 72 MNFDVIKGKPIRIMWS----QRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 171 ARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQS 230
+V+ D+ S+G+ FV F Q+ A AI + G L R++ G + ++
Sbjct: 128 CKVVCDENG--SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFV-------GRFKSRKE 178
Query: 231 SDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGV 290
+A EL + E +T VY+ N EV L F G +
Sbjct: 179 REA----ELGAKAKE----------------FTNVYIKNFGEEVDDESLKELFSQFGKTL 218
Query: 291 IEEVRVQRD-----KGFGFVRYSTHAEAALAIQMGNTTQSS 326
V+V RD KGFGFV Y H +A A++ N + S
Sbjct: 219 --SVKVMRDPTGKSKGFGFVSYEKHEDANKAVEEMNGKEIS 257
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 97/395 (24%), Positives = 169/395 (42%), Gaps = 54/395 (13%)
Query: 52 DPSTCRS----VYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRR 105
DPS +S V++ N+ + L + FS+ G + CK++ + S Y F+H+ +
Sbjct: 90 DPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQE 149
Query: 106 SAAMAILSLNGRHLFGQPIKVNWAYASGQREDTSG-----HFNIFVGDLSPEVTDATLFA 160
+A AI +NG L + + V + +RE G N+++ + EV D +L
Sbjct: 150 AADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKE 209
Query: 161 CFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATK 220
FS + +VM D TG+S+GFGFVS+ +DA A+ ++ GK + + I A K
Sbjct: 210 LFSQFGKTLSVKVMRD-PTGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKVIFVGRAQK 268
Query: 221 GAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLH 280
++Q+ EL + +E + Q +Y+ NL + L
Sbjct: 269 KV----ERQA-------ELKRKFEQLKQERISRY------QGVNLYIKNLDDTIDDEKLR 311
Query: 281 RHFHSLGAGVIEEVRVQ--RDKGFGFVRYSTHAEAALAIQMGN----------------- 321
+ F G+ +V ++ R KGFGFV +S+ EA A+ N
Sbjct: 312 KEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRK 371
Query: 322 TTQSSYLFGKQMKCSWGSKPTPPGTSSNPLPPPA------AAPIPGLSAADLLAYERQIA 375
+ ++L + M+ G + P N P A A P PG +A L++ E+ ++
Sbjct: 372 EERKAHLTNQYMQRVAGMRALPANAILNQFQPAAGGYFVPAVPQPGPWSASLVSDEQCLS 431
Query: 376 MSKMGGVHALMHPQAQHPLKQAAMGVGSAGASQAI 410
G+ + + P + G+A AS+ +
Sbjct: 432 PPGFQGMPSAIRQSGPRPTLRHLAPTGNAPASRGL 466
>gi|387018636|gb|AFJ51436.1| Splicing factor 3B subunit 4-like [Crotalus adamanteus]
Length = 417
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 63/194 (32%), Positives = 104/194 (53%), Gaps = 10/194 (5%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS-----YGFIHYFDRRSAAMAIL 112
+VYVG + +V+EPLL E+F GPV + KD+ + YGF+ + A AI
Sbjct: 14 TVYVGGLDEKVSEPLLWELFLQAGPVVNTHM-PKDRVTGQHQGYGFVEFLSEEDADYAIK 72
Query: 113 SLNGRHLFGQPIKVNWAYASGQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSC-SDA 171
+N L+G+PI+VN A A + D NIF+G+L PE+ + L+ FS +
Sbjct: 73 IMNMIKLYGKPIRVNKASAHNKNLDVGA--NIFIGNLDPEIDEKLLYDTFSAFGVILQTP 130
Query: 172 RVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSS 231
++M D TG S+G+ F++F + + +AI + G++L +R I ++A K E + S
Sbjct: 131 KIMRDPDTGNSKGYAFINFASFDASDAAIEAMNGQYLCNRPITVSYAFKKDSKGE-RHGS 189
Query: 232 DAKSVVELTNGSSE 245
A+ ++ N S+
Sbjct: 190 AAERLLAAQNPLSQ 203
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/216 (22%), Positives = 96/216 (44%), Gaps = 44/216 (20%)
Query: 131 ASGQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSF 190
A+G + + ++VG L +V++ L+ F + + D+ TG+ +G+GFV F
Sbjct: 2 AAGPISERNQDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEF 61
Query: 191 RNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKET 250
+++DA AI + L + IR N K + +N++ L G++
Sbjct: 62 LSEEDADYAIKIMNMIKLYGKPIRVN---KASAHNKN-----------LDVGAN------ 101
Query: 251 TNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRD------KGFGF 304
+++GNL PE+ + L+ F + G +++ ++ RD KG+ F
Sbjct: 102 --------------IFIGNLDPEIDEKLLYDTFSAFGV-ILQTPKIMRDPDTGNSKGYAF 146
Query: 305 VRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSK 340
+ +++ + AI+ N YL + + S+ K
Sbjct: 147 INFASFDASDAAIEAMN---GQYLCNRPITVSYAFK 179
>gi|402593376|gb|EJW87303.1| hypothetical protein WUBG_01785 [Wuchereria bancrofti]
Length = 375
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 60/168 (35%), Positives = 94/168 (55%), Gaps = 7/168 (4%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS----YGFIHYFDRRSAAMAILS 113
++YVG + +VT+ +L E+F GPV + + +S +GFI + A AI
Sbjct: 14 TIYVGGLDEKVTDAILWELFVQAGPVVSVNMPKDRVTSSHQGFGFIEFMGEEDADYAIKI 73
Query: 114 LNGRHLFGQPIKVNWAYASGQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDA-R 172
+N L+G+PIKVN A A + D N+FVG+L PEV + LF FS + +
Sbjct: 74 MNMIKLYGKPIKVNKASAHEKNMDVGA--NVFVGNLDPEVDEKLLFDTFSAFGVILQVPK 131
Query: 173 VMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATK 220
+M D +TG S+GF FV+F + + + SAI + G++L +R I ++A K
Sbjct: 132 IMRDAETGNSKGFAFVNFASFEASDSAIEAMNGQFLCNRAITVSYAFK 179
>gi|312067511|ref|XP_003136777.1| spliceosomal protein on the X [Loa loa]
gi|307768054|gb|EFO27288.1| spliceosomal protein on the X [Loa loa]
Length = 375
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 60/168 (35%), Positives = 94/168 (55%), Gaps = 7/168 (4%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS----YGFIHYFDRRSAAMAILS 113
++YVG + +VT+ +L E+F GPV + + +S +GFI + A AI
Sbjct: 14 TIYVGGLDEKVTDAILWELFVQAGPVVSVNMPKDRVTSSHQGFGFIEFMGEEDADYAIKI 73
Query: 114 LNGRHLFGQPIKVNWAYASGQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDA-R 172
+N L+G+PIKVN A A + D N+FVG+L PEV + LF FS + +
Sbjct: 74 MNMIKLYGKPIKVNKASAHEKNMDVGA--NVFVGNLDPEVDEKLLFDTFSAFGVILQVPK 131
Query: 173 VMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATK 220
+M D +TG S+GF FV+F + + + SAI + G++L +R I ++A K
Sbjct: 132 IMRDAETGNSKGFAFVNFASFEASDSAIEAMNGQFLCNRAITVSYAFK 179
>gi|119596296|gb|EAW75890.1| hCG2019100, isoform CRA_d [Homo sapiens]
Length = 639
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 83/279 (29%), Positives = 130/279 (46%), Gaps = 43/279 (15%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIR----KDKSSYGFIHYFDRRSAAMAILS 113
S+YVG++H VTE +L E FS GP+ ++ R + Y +I++ A A+ +
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADAERALDT 71
Query: 114 LNGRHLFGQPIKVNWAYAS-GQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDAR 172
+N L GQPI++ W+ G R+ SG NIF+ +L + + L+ FS + + +
Sbjct: 72 MNFEMLKGQPIRIMWSQRDPGLRK--SGVGNIFIKNLEDSIDNKALYDTFSTFGNILSCK 129
Query: 173 VMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSSD 232
V D+ SRGFGFV F + AQ AIN + G L R++ G+ + ++ +
Sbjct: 130 VACDEHG--SRGFGFVHFETHEAAQQAINTMNGMLLNDRKV-------FVGHFKSRRERE 180
Query: 233 AKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIE 292
A EL + E +T +YV NL +V + L F G +
Sbjct: 181 A----ELGARALE----------------FTNIYVKNLPVDVDEQGLQDLFSQFGK--ML 218
Query: 293 EVRVQRD-----KGFGFVRYSTHAEAALAIQMGNTTQSS 326
V+V RD + FGFV + H EA A+ N + S
Sbjct: 219 SVKVMRDNSGHSRCFGFVNFEKHEEAQKAVVHMNGKEVS 257
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 77/285 (27%), Positives = 122/285 (42%), Gaps = 33/285 (11%)
Query: 49 PGFDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRRS 106
PG S ++++ N+ + L + FS+ G + CK+ + S +GF+H+ +
Sbjct: 91 PGLRKSGVGNIFIKNLEDSIDNKALYDTFSTFGNILSCKVACDEHGSRGFGFVHFETHEA 150
Query: 107 AAMAILSLNGRHLFGQPIKVNWAYASGQREDTSG-----HFNIFVGDLSPEVTDATLFAC 161
A AI ++NG L + + V + +RE G NI+V +L +V + L
Sbjct: 151 AQQAINTMNGMLLNDRKVFVGHFKSRREREAELGARALEFTNIYVKNLPVDVDEQGLQDL 210
Query: 162 FSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKG 221
FS + +VM D +G SR FGFV+F ++AQ A+ + GK + R + A K
Sbjct: 211 FSQFGKMLSVKVMRDN-SGHSRCFGFVNFEKHEEAQKAVVHMNGKEVSGRLLYAGRAQKR 269
Query: 222 AGN-NEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLH 280
NE K+ + L Q +YV NL + L
Sbjct: 270 VERQNELKRRFEQMKQDRL------------------RRYQGVNLYVKNLDDSIDDDKLR 311
Query: 281 RHFHSLGAGVIEEVRVQRD----KGFGFVRYSTHAEAALAIQMGN 321
+ F GVI +V + KGFGFV +S+ EA A+ N
Sbjct: 312 KEFSPY--GVITSAKVMTEGGHSKGFGFVCFSSPEEATKAVTEMN 354
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 86/174 (49%), Gaps = 20/174 (11%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDK---SSYGFIHYFDRRSAAMAILSL 114
++YV N+ V E LQ++FS G + K++R + +GF+++ A A++ +
Sbjct: 192 NIYVKNLPVDVDEQGLQDLFSQFGKMLSVKVMRDNSGHSRCFGFVNFEKHEEAQKAVVHM 251
Query: 115 NGRHLFGQPIKVNWAYASGQREDTSGH---------------FNIFVGDLSPEVTDATLF 159
NG+ + G+ + A +R++ N++V +L + D L
Sbjct: 252 NGKEVSGRLLYAGRAQKRVERQNELKRRFEQMKQDRLRRYQGVNLYVKNLDDSIDDDKLR 311
Query: 160 ACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQI 213
FS Y + A+VM + G S+GFGFV F + ++A A+ ++ G+ +G++ +
Sbjct: 312 KEFSPYGVITSAKVM--TEGGHSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPL 363
>gi|301790633|ref|XP_002930398.1| PREDICTED: polyadenylate-binding protein 4-like [Ailuropoda
melanoleuca]
Length = 644
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 79/281 (28%), Positives = 131/281 (46%), Gaps = 47/281 (16%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEG---CK-LIRKDKSSYGFIHYFDRRSAAMAILS 113
S+YVG++H+ VTE +L E FS GPV C+ +I + Y ++++ A A+ +
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIWVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 114 LNGRHLFGQPIKVNWAYASGQREDT---SGHFNIFVGDLSPEVTDATLFACFSVYPSCSD 170
+N + G+PI++ W+ QR+ + SG N+F+ +L + + L+ FS + +
Sbjct: 72 MNFDVIKGKPIRIMWS----QRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 171 ARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQS 230
+V+ D+ S+G+ FV F Q+ A AI + G L R++ G + ++
Sbjct: 128 CKVVCDENG--SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFV-------GRFKSRKE 178
Query: 231 SDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGV 290
+A EL + E +T VY+ N EV L F G +
Sbjct: 179 REA----ELGAKAKE----------------FTNVYIKNFGEEVDDESLKELFSQFGKTL 218
Query: 291 IEEVRVQRD-----KGFGFVRYSTHAEAALAIQMGNTTQSS 326
V+V RD KGFGFV Y H +A A++ N + S
Sbjct: 219 --SVKVMRDPSGKSKGFGFVSYEKHEDANKAVEEMNGKEIS 257
Score = 101 bits (251), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 130/283 (45%), Gaps = 31/283 (10%)
Query: 52 DPSTCRS----VYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRR 105
DPS +S V++ N+ + L + FS+ G + CK++ + S Y F+H+ +
Sbjct: 90 DPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQE 149
Query: 106 SAAMAILSLNGRHLFGQPIKVNWAYASGQREDTSG-----HFNIFVGDLSPEVTDATLFA 160
+A AI +NG L + + V + +RE G N+++ + EV D +L
Sbjct: 150 AADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKE 209
Query: 161 CFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATK 220
FS + +VM D +G+S+GFGFVS+ +DA A+ ++ GK + + I A K
Sbjct: 210 LFSQFGKTLSVKVMRD-PSGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKVIFVGRAQK 268
Query: 221 GAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLH 280
++Q+ EL + +E + Q +Y+ NL + L
Sbjct: 269 KV----ERQA-------ELKRKFEQLKQERISRY------QGVNLYIKNLDDTIDDEKLR 311
Query: 281 RHFHSLGAGVIEEVRVQ--RDKGFGFVRYSTHAEAALAIQMGN 321
+ F G+ +V ++ R KGFGFV +S+ EA A+ N
Sbjct: 312 KEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMN 354
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 88/181 (48%), Gaps = 20/181 (11%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRK---DKSSYGFIHYFDRRSAAMAILSL 114
+VY+ N +V + L+E+FS G K++R +GF+ Y A A+ +
Sbjct: 192 NVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGKSKGFGFVSYEKHEDANKAVEEM 251
Query: 115 NGRHLFGQPIKVNWAYASGQR-------------EDTSGH--FNIFVGDLSPEVTDATLF 159
NG+ + G+ I V A +R E S + N+++ +L + D L
Sbjct: 252 NGKEISGKVIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLR 311
Query: 160 ACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT 219
FS + S + A+VM + GRS+GFGFV F + ++A A+ ++ G+ +GS+ + A
Sbjct: 312 KEFSPFGSITSAKVMLED--GRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQ 369
Query: 220 K 220
+
Sbjct: 370 R 370
Score = 38.9 bits (89), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRRSAAMAILSLN 115
++Y+ N+ + + L++ FS G + K++ +D S +GF+ + A A+ +N
Sbjct: 295 NLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMN 354
Query: 116 GRHLFGQPIKVNWAYASGQRE 136
GR + +P+ V A +R+
Sbjct: 355 GRIVGSKPLYVALAQRKEERK 375
>gi|390465724|ref|XP_002750686.2| PREDICTED: polyadenylate-binding protein 4 [Callithrix jacchus]
Length = 656
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 130/281 (46%), Gaps = 47/281 (16%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIR----KDKSSYGFIHYFDRRSAAMAILS 113
S+YVG++H+ VTE +L E FS GPV ++ R + Y ++++ A A+ +
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 114 LNGRHLFGQPIKVNWAYASGQREDT---SGHFNIFVGDLSPEVTDATLFACFSVYPSCSD 170
+N + G+PI++ W+ QR+ + SG N+F+ +L + + L+ FS + +
Sbjct: 72 MNFDVIKGKPIRIMWS----QRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 171 ARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQS 230
+V+ D+ S+G+ FV F Q+ A AI + G L R++ G + ++
Sbjct: 128 CKVVCDENG--SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFV-------GRFKSRKE 178
Query: 231 SDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGV 290
+A EL + E +T VY+ N EV L F G +
Sbjct: 179 REA----ELGAKAKE----------------FTNVYIKNFGEEVDDESLKELFIQFGKTL 218
Query: 291 IEEVRVQRD-----KGFGFVRYSTHAEAALAIQMGNTTQSS 326
V+V RD KGFGFV Y H +A A++ N + S
Sbjct: 219 --SVKVMRDPNGKSKGFGFVSYEKHEDANKAVEEMNGKEIS 257
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 128/283 (45%), Gaps = 31/283 (10%)
Query: 52 DPSTCRS----VYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRR 105
DPS +S V++ N+ + L + FS+ G + CK++ + S Y F+H+ +
Sbjct: 90 DPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQE 149
Query: 106 SAAMAILSLNGRHLFGQPIKVNWAYASGQREDTSG-----HFNIFVGDLSPEVTDATLFA 160
+A AI +NG L + + V + +RE G N+++ + EV D +L
Sbjct: 150 AADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKE 209
Query: 161 CFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATK 220
F + +VM D G+S+GFGFVS+ +DA A+ ++ GK + + I A K
Sbjct: 210 LFIQFGKTLSVKVMRD-PNGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRAQK 268
Query: 221 GAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLH 280
++Q+ EL + +E + Q +Y+ NL + L
Sbjct: 269 KV----ERQA-------ELKRKFEQLKQERISRY------QGVNLYIKNLDDTIDDEKLR 311
Query: 281 RHFHSLGAGVIEEVRVQ--RDKGFGFVRYSTHAEAALAIQMGN 321
+ F G+ +V ++ R KGFGFV +S+ EA A+ N
Sbjct: 312 KEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMN 354
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 87/181 (48%), Gaps = 20/181 (11%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRK---DKSSYGFIHYFDRRSAAMAILSL 114
+VY+ N +V + L+E+F G K++R +GF+ Y A A+ +
Sbjct: 192 NVYIKNFGEEVDDESLKELFIQFGKTLSVKVMRDPNGKSKGFGFVSYEKHEDANKAVEEM 251
Query: 115 NGRHLFGQPIKVNWAYASGQR-------------EDTSGH--FNIFVGDLSPEVTDATLF 159
NG+ + G+ I V A +R E S + N+++ +L + D L
Sbjct: 252 NGKEISGKIIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLR 311
Query: 160 ACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT 219
FS + S + A+VM + GRS+GFGFV F + ++A A+ ++ G+ +GS+ + A
Sbjct: 312 KEFSPFGSITSAKVMLED--GRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQ 369
Query: 220 K 220
+
Sbjct: 370 R 370
Score = 38.9 bits (89), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRRSAAMAILSLN 115
++Y+ N+ + + L++ FS G + K++ +D S +GF+ + A A+ +N
Sbjct: 295 NLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMN 354
Query: 116 GRHLFGQPIKVNWAYASGQRE 136
GR + +P+ V A +R+
Sbjct: 355 GRIVGSKPLYVALAQRKEERK 375
>gi|358380439|gb|EHK18117.1| hypothetical protein TRIVIDRAFT_117191, partial [Trichoderma virens
Gv29-8]
Length = 417
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 94/311 (30%), Positives = 147/311 (47%), Gaps = 37/311 (11%)
Query: 58 SVYVGNIHTQVTEPLLQEVF-SSTGPVEGCKLIRKDKSS----YGFIHYFDRRSAAMAIL 112
++++G + + E ++ VF S+ G K+IR DK+S Y F+ F AA L
Sbjct: 50 TLWMGELEPWMDENFIKGVFLSAAGETVNVKVIR-DKNSGNAGYCFVE-FATPDAATKAL 107
Query: 113 SLNGRHL--FGQPIKVNWAYASG---QREDTSGHFNIFVGDLSPEVTDATLFACFSV-YP 166
LNG + + K+NWA G +R+D ++IFVGDL PEV + L + F +P
Sbjct: 108 GLNGTPVPNSSRQFKLNWASGGGLVDRRDDRGPEYSIFVGDLGPEVNEYVLVSLFQARFP 167
Query: 167 SCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT---KGAG 223
SC A++M D +G+SRG+GFV F ++ D Q A+ ++ G + G+R +R + AT +G
Sbjct: 168 SCKSAKIMTDAMSGQSRGYGFVRFSDENDQQRALVEMQGVYCGNRPMRISTATPKNRGNH 227
Query: 224 NNEDKQSSDAKSVVELTNGSSEDGKE------TTNTEAPENNP-----QYT-----TVYV 267
+ G + NP Q+T TV+V
Sbjct: 228 GFGHGHQGGPMMGGGMPQQQMWGGVQGFPYGGGAGAGGGGFNPATQMNQFTDPNNTTVFV 287
Query: 268 GNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSY 327
G L+ VT+ +L F G G I V++ KG GFV++ A +AI N Q
Sbjct: 288 GGLSGYVTEDELRSFFQ--GFGEITYVKIPPGKGCGFVQFVHRHAAEMAI---NQMQGYP 342
Query: 328 LFGKQMKCSWG 338
+ +++ SWG
Sbjct: 343 IGNSRVRLSWG 353
>gi|327290521|ref|XP_003229971.1| PREDICTED: splicing factor 3B subunit 4-like [Anolis carolinensis]
Length = 417
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 63/194 (32%), Positives = 104/194 (53%), Gaps = 10/194 (5%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS-----YGFIHYFDRRSAAMAIL 112
+VYVG + +V+EPLL E+F GPV + KD+ + YGF+ + A AI
Sbjct: 14 TVYVGGLDEKVSEPLLWELFLQAGPVVNTHM-PKDRVTGQHQGYGFVEFLSEEDADYAIK 72
Query: 113 SLNGRHLFGQPIKVNWAYASGQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSC-SDA 171
+N L+G+PI+VN A A + D NIF+G+L PE+ + L+ FS +
Sbjct: 73 IMNMIKLYGKPIRVNKASAHNKNLDVGA--NIFIGNLDPEIDEKLLYDTFSAFGVILQTP 130
Query: 172 RVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSS 231
++M D TG S+G+ F++F + + +AI + G++L +R I ++A K E + S
Sbjct: 131 KIMRDPDTGNSKGYAFINFASFDASDAAIEAMNGQYLCNRPITVSYAFKKDSKGE-RHGS 189
Query: 232 DAKSVVELTNGSSE 245
A+ ++ N S+
Sbjct: 190 AAERLLAAQNPLSQ 203
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/216 (22%), Positives = 93/216 (43%), Gaps = 44/216 (20%)
Query: 131 ASGQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSF 190
A+G + + ++VG L +V++ L+ F + + D+ TG+ +G+GFV F
Sbjct: 2 AAGPISERNQDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEF 61
Query: 191 RNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKET 250
+++DA AI + L + IR N A+ N L G++
Sbjct: 62 LSEEDADYAIKIMNMIKLYGKPIRVNKASAHNKN--------------LDVGAN------ 101
Query: 251 TNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRD------KGFGF 304
+++GNL PE+ + L+ F + G +++ ++ RD KG+ F
Sbjct: 102 --------------IFIGNLDPEIDEKLLYDTFSAFGV-ILQTPKIMRDPDTGNSKGYAF 146
Query: 305 VRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSK 340
+ +++ + AI+ N YL + + S+ K
Sbjct: 147 INFASFDASDAAIEAMN---GQYLCNRPITVSYAFK 179
>gi|170590788|ref|XP_001900153.1| Hypothetical RNA-binding protein C08B11.5 in chromosome II,
putative [Brugia malayi]
gi|158592303|gb|EDP30903.1| Hypothetical RNA-binding protein C08B11.5 in chromosome II,
putative [Brugia malayi]
Length = 375
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 60/168 (35%), Positives = 94/168 (55%), Gaps = 7/168 (4%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS----YGFIHYFDRRSAAMAILS 113
++YVG + +VT+ +L E+F GPV + + +S +GFI + A AI
Sbjct: 14 TIYVGGLDEKVTDAILWELFVQAGPVVSVNMPKDRVTSSHQGFGFIEFMGEEDADYAIKI 73
Query: 114 LNGRHLFGQPIKVNWAYASGQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDA-R 172
+N L+G+PIKVN A A + D N+FVG+L PEV + LF FS + +
Sbjct: 74 MNMIKLYGKPIKVNKASAHEKNMDVGA--NVFVGNLDPEVDEKLLFDTFSAFGVILQVPK 131
Query: 173 VMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATK 220
+M D +TG S+GF FV+F + + + SAI + G++L +R I ++A K
Sbjct: 132 IMRDAETGXSKGFAFVNFASFEASDSAIEAMNGQFLCNRAITVSYAFK 179
>gi|432102707|gb|ELK30188.1| Polyadenylate-binding protein 1 [Myotis davidii]
Length = 650
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 79/285 (27%), Positives = 133/285 (46%), Gaps = 44/285 (15%)
Query: 49 PGFDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS----YGFIHYFDR 104
PGF PS S+YVG++H +VTE +L E FS+ GP+ ++ R SS YG++++
Sbjct: 14 PGF-PSA--SLYVGDLHPEVTEAMLYEKFSAAGPILSVRVCRDALSSRSLGYGYVNFHRP 70
Query: 105 RSAAMAILSLNGRHLFGQPIKVNWAYASGQREDTSGHFNIFVGDLSPEVTDATLFACFSV 164
A A+ ++N L G+P+++ W + SG N+FV L + + L+ F+
Sbjct: 71 EDAGHALNTMNFDVLHGKPVRIMWCHRDPSLR-RSGVGNVFVNHLDASIDNKELYDLFAG 129
Query: 165 YPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGN 224
+ + +V+ D+ +G GFV F ++ A AI ++ G + R++ G
Sbjct: 130 FGTILSCKVVSDENG--PKGHGFVHFETREAADKAIKEMNGSLVKERKVFV-----GQFK 182
Query: 225 NEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFH 284
+++ + ++ +E Q+T VYV N A T L F
Sbjct: 183 RPNQREEERRAKME----------------------QFTNVYVKNFADGTTDEYLLEIFS 220
Query: 285 SLGAGVIEEVRVQRD-----KGFGFVRYSTHAEAALAIQMGNTTQ 324
G + V++ D KGFGF+R+ HA+A AI+ N Q
Sbjct: 221 QYGP--LSSVKIMTDDSGKSKGFGFIRFECHADAKRAIEEVNGKQ 263
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/280 (26%), Positives = 126/280 (45%), Gaps = 31/280 (11%)
Query: 52 DPSTCRS----VYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDK--SSYGFIHYFDRR 105
DPS RS V+V ++ + L ++F+ G + CK++ + +GF+H+ R
Sbjct: 98 DPSLRRSGVGNVFVNHLDASIDNKELYDLFAGFGTILSCKVVSDENGPKGHGFVHFETRE 157
Query: 106 SAAMAILSLNGRHLFGQPIKVNWAYASGQRED-----TSGHFNIFVGDLSPEVTDATLFA 160
+A AI +NG + + + V QRE+ N++V + + TD L
Sbjct: 158 AADKAIKEMNGSLVKERKVFVGQFKRPNQREEERRAKMEQFTNVYVKNFADGTTDEYLLE 217
Query: 161 CFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATK 220
FS Y S ++M D +G+S+GFGF+ F DA+ AI ++ GK G R+I + A K
Sbjct: 218 IFSQYGPLSSVKIMTDD-SGKSKGFGFIRFECHADAKRAIEEVNGKQFGGRKIYVSRAQK 276
Query: 221 GAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLH 280
+++ ++ + G +++V NLA L
Sbjct: 277 --KKEREEELQQKLEEIKQNRIAKYHG---------------MSLFVKNLAESTDDEHLR 319
Query: 281 RHFHSLGAGVIEEVRVQ--RDKGFGFVRYSTHAEAALAIQ 318
+ F G +V V+ R KGFGFV +S+ EA A++
Sbjct: 320 KIFAPFGTVTSAKVIVKGGRRKGFGFVSFSSREEAKKAVE 359
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 89/179 (49%), Gaps = 20/179 (11%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS---YGFIHYFDRRSAAMAILSL 114
+VYV N T+ L E+FS GP+ K++ D +GFI + A AI +
Sbjct: 200 NVYVKNFADGTTDEYLLEIFSQYGPLSSVKIMTDDSGKSKGFGFIRFECHADAKRAIEEV 259
Query: 115 NGRHLFGQPIKVNWAYASGQREDTSGH---------------FNIFVGDLSPEVTDATLF 159
NG+ G+ I V+ A +RE+ ++FV +L+ D L
Sbjct: 260 NGKQFGGRKIYVSRAQKKKEREEELQQKLEEIKQNRIAKYHGMSLFVKNLAESTDDEHLR 319
Query: 160 ACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWA 218
F+ + + + A+V+ K GR +GFGFVSF ++++A+ A+ ++ GK L +R + ++A
Sbjct: 320 KIFAPFGTVTSAKVI--VKGGRRKGFGFVSFSSREEAKKAVEEMHGKMLSARPLYVSYA 376
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 42/80 (52%), Gaps = 11/80 (13%)
Query: 264 TVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDK------GFGFVRYSTHAEAALAI 317
++YVG+L PEVT+ L+ F + AG I VRV RD G+G+V + +A A+
Sbjct: 20 SLYVGDLHPEVTEAMLYEKFSA--AGPILSVRVCRDALSSRSLGYGYVNFHRPEDAGHAL 77
Query: 318 QMGNTTQSSYLFGKQMKCSW 337
NT L GK ++ W
Sbjct: 78 ---NTMNFDVLHGKPVRIMW 94
>gi|121709146|ref|XP_001272322.1| mRNA binding post-transcriptional regulator (Csx1), putative
[Aspergillus clavatus NRRL 1]
gi|119400471|gb|EAW10896.1| mRNA binding post-transcriptional regulator (Csx1), putative
[Aspergillus clavatus NRRL 1]
Length = 417
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 95/299 (31%), Positives = 148/299 (49%), Gaps = 27/299 (9%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS-----YGFIHYFDRRSAAMAIL 112
++++G + + E ++ ++ G K+IR DK S Y F+ F +AA L
Sbjct: 67 TLWMGELEPWIDENFIRNLWFQMGEQVNVKMIR-DKFSGSNAGYCFVD-FASPAAAAKAL 124
Query: 113 SLNGRHL--FGQPIKVNWAYASG----QREDTSGHFNIFVGDLSPEVTDATLFACF-SVY 165
SLNG + + K+NWA G R+D ++IFVGDL PEV + L + F + +
Sbjct: 125 SLNGTPMPNTNRVFKLNWATGGGLADRSRDDRGPEYSIFVGDLGPEVNEYVLVSLFQNRF 184
Query: 166 PSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT---KGA 222
PSC A++M D +G SRG+GFV F ++ D Q A+ ++ G + G+R +R + AT KG
Sbjct: 185 PSCKSAKIMTDPISGMSRGYGFVRFSDENDQQRALTEMQGVYCGNRPMRISTATPKNKGP 244
Query: 223 GNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPEN---NPQYTTVYVGNLAPEVTQLDL 279
G + + G+ G P N +P TTV+VG L+ VT+ +L
Sbjct: 245 GVVPGGMGMPGPAGMYPPMGAPPMG--FYGAPQPMNQFTDPNNTTVFVGGLSGYVTEDEL 302
Query: 280 HRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWG 338
F G G I V++ KG GFV++ A +AI N Q + +++ SWG
Sbjct: 303 RSFFQ--GFGEITYVKIPPGKGCGFVQFVQRHAAEMAI---NQMQGYPIGNSRVRLSWG 356
>gi|380023603|ref|XP_003695607.1| PREDICTED: nucleolin-like [Apis florea]
Length = 360
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 63/175 (36%), Positives = 96/175 (54%), Gaps = 20/175 (11%)
Query: 170 DARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQ 229
D RV+ D +T +S+G+GFVSF + +A+SAI + G+WLGSR IR NWAT+ + +
Sbjct: 61 DCRVVRDPQTLKSKGYGFVSFVKKAEAESAIGAMNGQWLGSRSIRTNWATRKPPAPKSEA 120
Query: 230 SSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAG 289
++ + E+ N SS P TVY G L +T+ + + F G+
Sbjct: 121 NAKPLTFDEVYNQSS---------------PTNCTVYCGGLTNGLTEELMQKTFSPFGS- 164
Query: 290 VIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSKPTPP 344
I+E+RV +DKG+ F+R+ST A AI + T + G+ +KCSWG + P
Sbjct: 165 -IQEIRVFKDKGYAFIRFSTKESATHAIVAVHNTD---INGQTVKCSWGKESGDP 215
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 36/171 (21%), Positives = 75/171 (43%), Gaps = 27/171 (15%)
Query: 86 CKLIRKDKS----SYGFIHYFDRRSAAMAILSLNGRHLFGQPIKVNWA------------ 129
C+++R ++ YGF+ + + A AI ++NG+ L + I+ NWA
Sbjct: 62 CRVVRDPQTLKSKGYGFVSFVKKAEAESAIGAMNGQWLGSRSIRTNWATRKPPAPKSEAN 121
Query: 130 -----YASGQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRG 184
+ + + + ++ G L+ +T+ + FS + S + RV D +G
Sbjct: 122 AKPLTFDEVYNQSSPTNCTVYCGGLTNGLTEELMQKTFSPFGSIQEIRVFKD------KG 175
Query: 185 FGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSSDAKS 235
+ F+ F ++ A AI + + + ++C+W + N +Q+ A S
Sbjct: 176 YAFIRFSTKESATHAIVAVHNTDINGQTVKCSWGKESGDPNNAQQTGQALS 226
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 47/82 (57%), Gaps = 3/82 (3%)
Query: 52 DPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSSYGFIHYFDRRSAAMAI 111
P+ C +VY G + +TE L+Q+ FS G ++ ++ KDK Y FI + + SA AI
Sbjct: 135 SPTNC-TVYCGGLTNGLTEELMQKTFSPFGSIQEIRVF-KDK-GYAFIRFSTKESATHAI 191
Query: 112 LSLNGRHLFGQPIKVNWAYASG 133
++++ + GQ +K +W SG
Sbjct: 192 VAVHNTDINGQTVKCSWGKESG 213
>gi|365985359|ref|XP_003669512.1| hypothetical protein NDAI_0C06100 [Naumovozyma dairenensis CBS 421]
gi|343768280|emb|CCD24269.1| hypothetical protein NDAI_0C06100 [Naumovozyma dairenensis CBS 421]
Length = 585
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 133/281 (47%), Gaps = 42/281 (14%)
Query: 54 STCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIR----KDKSSYGFIHYFDRRSAAM 109
++ S+YVG++ V+E LL ++FS G V ++ R K Y ++++ D +
Sbjct: 37 NSSASLYVGDLDPSVSEALLYDIFSPIGSVSSIRVCRDAITKTSLGYAYVNFNDHEAGKK 96
Query: 110 AILSLNGRHLFGQPIKVNWAYASGQRE---DTSGHFNIFVGDLSPEVTDATLFACFSVYP 166
AI LN + G+ ++ W+ QR+ G NIF+ +L ++ + L+ FSV+
Sbjct: 97 AIEKLNYTPIKGRLCRIMWS----QRDPALRKKGSANIFIKNLHSDIDNKALYDTFSVFG 152
Query: 167 SCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNE 226
+ +++ D+ TG+S+GFGFV F + A+ AI+ L G L ++I G +
Sbjct: 153 NILSSKIATDE-TGKSKGFGFVHFEDDTAAKEAIDALNGMLLNGQEIFV-------GPHL 204
Query: 227 DKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSL 286
++ D ++ E+ +T +YV N+ E T + F
Sbjct: 205 SRKERD--------------------SQLEESKANFTNIYVKNINLETTDEEFTELFSKY 244
Query: 287 G---AGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQ 324
G + +E+ + KGFGFV + H +AA A++ N +Q
Sbjct: 245 GKVLSAALEKTEDGKLKGFGFVDFENHEDAAKAVEELNGSQ 285
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 124/287 (43%), Gaps = 35/287 (12%)
Query: 49 PGFDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKD---KSSYGFIHYFDRR 105
P ++++ N+H+ + L + FS G + K+ + +GF+H+ D
Sbjct: 120 PALRKKGSANIFIKNLHSDIDNKALYDTFSVFGNILSSKIATDETGKSKGFGFVHFEDDT 179
Query: 106 SAAMAILSLNGRHLFGQPIKVNWAYASGQR----EDTSGHF-NIFVGDLSPEVTDATLFA 160
+A AI +LNG L GQ I V + +R E++ +F NI+V +++ E TD
Sbjct: 180 AAKEAIDALNGMLLNGQEIFVGPHLSRKERDSQLEESKANFTNIYVKNINLETTDEEFTE 239
Query: 161 CFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATK 220
FS Y A + + G+ +GFGFV F N +DA A+ +L G +++ + A K
Sbjct: 240 LFSKYGKVLSA-ALEKTEDGKLKGFGFVDFENHEDAAKAVEELNGSQFKDQELFVSRAQK 298
Query: 221 GAGN-NEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDL 279
E K+ +A + ++ Q +++ NL + L
Sbjct: 299 KYERMQELKKQYEASRLEKMA------------------KYQGVNLFIKNLDDSIDDEKL 340
Query: 280 HRHFHSLGAGVIEEVRVQR-----DKGFGFVRYSTHAEAALAIQMGN 321
F G I VRV R +GFGFV +ST EA AI N
Sbjct: 341 KEEFAPYGN--ITSVRVMRTENGKSRGFGFVCFSTPEEATKAITEKN 385
>gi|328769877|gb|EGF79920.1| hypothetical protein BATDEDRAFT_19794 [Batrachochytrium
dendrobatidis JAM81]
Length = 470
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 88/304 (28%), Positives = 144/304 (47%), Gaps = 30/304 (9%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS-----YGFIHYFDRRSAAMAIL 112
++++G++ + E +++ + G K+I KDKS+ Y F+ + AA +
Sbjct: 13 TLWMGDLLPWMDEHFIRQTWRLLGESVTVKMI-KDKSTGSLAGYCFVEFSSSDVAAKLLE 71
Query: 113 SLNGRHLFGQP--IKVNWAYASGQRE-DTSGHFNIFVGDLSPEVTDATLFACF-SVYPSC 168
+NG + G K+NWA+ G F+IFVGDL+ E+ D L F YPS
Sbjct: 72 LVNGTLIPGTHCFFKLNWAFGGGLSPLYVLPEFSIFVGDLAHEINDILLMQVFHERYPSV 131
Query: 169 SDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT---KGAGNN 225
ARV+ D TG +G+GFV F ++ D Q ++ DL G+ +GSR +R + AT K G+N
Sbjct: 132 KSARVVIDPTTGSPKGYGFVRFGSEADQQQSLVDLQGQMIGSRPVRVSIATPKHKALGSN 191
Query: 226 EDKQSS---------DAKSVVELTNGSSEDGKETT--NTEAPENNPQYTTVYVGNLAPEV 274
DA + + N + ++ + N+P +T+++G L +
Sbjct: 192 GHGMPGYYPIPPSYMDASGAM-IPNSAHMIYRQPVYMHQHLGGNDPTNSTIFIGALPATM 250
Query: 275 TQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMK 334
T DL +HF L G I ++ K GFV++ A +AIQ + G ++
Sbjct: 251 TNDDLRKHF--LPFGEIVYTKIPFGKRCGFVQFIHRQSAEMAIQ---EMDGKVIGGSALR 305
Query: 335 CSWG 338
SWG
Sbjct: 306 LSWG 309
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 44/218 (20%), Positives = 84/218 (38%), Gaps = 56/218 (25%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS-----YGFIHYFDRRSAAMAIL 112
S++VG++ ++ + LL +VF P + D ++ YGF+ + +++
Sbjct: 105 SIFVGDLAHEINDILLMQVFHERYPSVKSARVVIDPTTGSPKGYGFVRFGSEADQQQSLV 164
Query: 113 SLNGRHLFGQPIKVNWAY-------------------------ASGQREDTSGHF----- 142
L G+ + +P++V+ A ASG S H
Sbjct: 165 DLQGQMIGSRPVRVSIATPKHKALGSNGHGMPGYYPIPPSYMDASGAMIPNSAHMIYRQP 224
Query: 143 ---------------NIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGF 187
IF+G L +T+ L F + ++ + ++ G F
Sbjct: 225 VYMHQHLGGNDPTNSTIFIGALPATMTNDDLRKHFLPFGEIVYTKIPFGKRCG------F 278
Query: 188 VSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNN 225
V F ++Q A+ AI ++ GK +G +R +W GN+
Sbjct: 279 VQFIHRQSAEMAIQEMDGKVIGGSALRLSWGRSQRGNS 316
>gi|348586343|ref|XP_003478928.1| PREDICTED: splicing factor 3B subunit 4-like [Cavia porcellus]
Length = 424
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 63/194 (32%), Positives = 104/194 (53%), Gaps = 10/194 (5%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS-----YGFIHYFDRRSAAMAIL 112
+VYVG + +V+EPLL E+F GPV + KD+ + YGF+ + A AI
Sbjct: 14 TVYVGGLDEKVSEPLLWELFLQAGPVVNTHM-PKDRVTGQHQGYGFVEFLSEEDADYAIK 72
Query: 113 SLNGRHLFGQPIKVNWAYASGQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSC-SDA 171
+N L+G+PI+VN A A + D NIF+G+L PE+ + L+ FS +
Sbjct: 73 IMNMIKLYGKPIRVNKASAHNKNLDVGA--NIFIGNLDPEIDEKLLYDTFSAFGVILQTP 130
Query: 172 RVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSS 231
++M D TG S+G+ F++F + + +AI + G++L +R I ++A K E + S
Sbjct: 131 KIMRDPDTGNSKGYAFINFASFDASDAAIEAMNGQYLCNRPITVSYAFKKDSKGE-RHGS 189
Query: 232 DAKSVVELTNGSSE 245
A+ ++ N S+
Sbjct: 190 AAERLLAAQNPLSQ 203
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/216 (22%), Positives = 96/216 (44%), Gaps = 44/216 (20%)
Query: 131 ASGQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSF 190
A+G + + ++VG L +V++ L+ F + + D+ TG+ +G+GFV F
Sbjct: 2 AAGPISERNQDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEF 61
Query: 191 RNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKET 250
+++DA AI + L + IR N K + +N++ L G++
Sbjct: 62 LSEEDADYAIKIMNMIKLYGKPIRVN---KASAHNKN-----------LDVGAN------ 101
Query: 251 TNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRD------KGFGF 304
+++GNL PE+ + L+ F + G +++ ++ RD KG+ F
Sbjct: 102 --------------IFIGNLDPEIDEKLLYDTFSAFGV-ILQTPKIMRDPDTGNSKGYAF 146
Query: 305 VRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSK 340
+ +++ + AI+ N YL + + S+ K
Sbjct: 147 INFASFDASDAAIEAMN---GQYLCNRPITVSYAFK 179
>gi|410953832|ref|XP_003983574.1| PREDICTED: polyadenylate-binding protein 1-like [Felis catus]
Length = 616
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 80/270 (29%), Positives = 127/270 (47%), Gaps = 43/270 (15%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIR----KDKSSYGFIHYFDRRSAAMAILS 113
S+YVG++H VTE +L E FS GP+ ++ R + Y +I++ A A+ +
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADAERALDT 71
Query: 114 LNGRHLFGQPIKVNWAYAS-GQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDAR 172
+N + GQPI++ W+ G R+ SG NIF+ +L + + L+ FS + + +
Sbjct: 72 MNFEVIRGQPIRIMWSQRDPGLRK--SGVGNIFIKNLEDSIDNKALYDTFSTFGNILSCK 129
Query: 173 VMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSSD 232
V+ D SRGFGFV F + AQ AI + G L R++ G+ + ++ +
Sbjct: 130 VVCDNHG--SRGFGFVHFETHEAAQQAIVTMNGMLLNDRKVFV-------GHFKSRRERE 180
Query: 233 AKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIE 292
A EL + E +T +YV NL +V + L F G +
Sbjct: 181 A----ELGARAME----------------FTNIYVKNLHVDVDEQGLQDLFSQFGKML-- 218
Query: 293 EVRVQRD-----KGFGFVRYSTHAEAALAI 317
V+V RD +GFGFV + H EA A+
Sbjct: 219 SVKVMRDDSGHSRGFGFVNFEKHEEAQKAV 248
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/285 (28%), Positives = 127/285 (44%), Gaps = 33/285 (11%)
Query: 49 PGFDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRRS 106
PG S ++++ N+ + L + FS+ G + CK++ + S +GF+H+ +
Sbjct: 91 PGLRKSGVGNIFIKNLEDSIDNKALYDTFSTFGNILSCKVVCDNHGSRGFGFVHFETHEA 150
Query: 107 AAMAILSLNGRHLFGQPIKVNWAYASGQREDTSG-----HFNIFVGDLSPEVTDATLFAC 161
A AI+++NG L + + V + +RE G NI+V +L +V + L
Sbjct: 151 AQQAIVTMNGMLLNDRKVFVGHFKSRREREAELGARAMEFTNIYVKNLHVDVDEQGLQDL 210
Query: 162 FSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKG 221
FS + +VM D +G SRGFGFV+F ++AQ A+ D+ GK + R + A K
Sbjct: 211 FSQFGKMLSVKVMRDD-SGHSRGFGFVNFEKHEEAQKAVTDMNGKEVRGRLLYVGRAQKR 269
Query: 222 AGN-NEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLH 280
NE K+ + LT Q +YV NL + L
Sbjct: 270 VERQNELKRRFEQMKQDRLTRY------------------QGVNLYVKNLDDSIDDEKLR 311
Query: 281 RHFHSLGAGVIEEVRVQRD----KGFGFVRYSTHAEAALAIQMGN 321
R F GVI +V + KGFGFV +S+ EA A+ N
Sbjct: 312 REFSPY--GVITSAKVMTEGGHSKGFGFVCFSSPEEATKAVTEMN 354
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 89/181 (49%), Gaps = 20/181 (11%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDK---SSYGFIHYFDRRSAAMAILSL 114
++YV N+H V E LQ++FS G + K++R D +GF+++ A A+ +
Sbjct: 192 NIYVKNLHVDVDEQGLQDLFSQFGKMLSVKVMRDDSGHSRGFGFVNFEKHEEAQKAVTDM 251
Query: 115 NGRHLFGQPIKVNWAYASGQREDTSGH---------------FNIFVGDLSPEVTDATLF 159
NG+ + G+ + V A +R++ N++V +L + D L
Sbjct: 252 NGKEVRGRLLYVGRAQKRVERQNELKRRFEQMKQDRLTRYQGVNLYVKNLDDSIDDEKLR 311
Query: 160 ACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT 219
FS Y + A+VM + G S+GFGFV F + ++A A+ ++ G+ +G++ + A
Sbjct: 312 REFSPYGVITSAKVMTE--GGHSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQ 369
Query: 220 K 220
+
Sbjct: 370 R 370
>gi|403302777|ref|XP_003942029.1| PREDICTED: splicing factor 3B subunit 4 [Saimiri boliviensis
boliviensis]
Length = 424
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 63/194 (32%), Positives = 104/194 (53%), Gaps = 10/194 (5%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS-----YGFIHYFDRRSAAMAIL 112
+VYVG + +V+EPLL E+F GPV + KD+ + YGF+ + A AI
Sbjct: 14 TVYVGGLDEKVSEPLLWELFLQAGPVVNTHM-PKDRVTGQHQGYGFVEFLSEEDADYAIK 72
Query: 113 SLNGRHLFGQPIKVNWAYASGQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSC-SDA 171
+N L+G+PI+VN A A + D NIF+G+L PE+ + L+ FS +
Sbjct: 73 IMNMIKLYGKPIRVNKASAHNKNLDVGA--NIFIGNLDPEIDEKLLYDTFSAFGVILQTP 130
Query: 172 RVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSS 231
++M D TG S+G+ F++F + + +AI + G++L +R I ++A K E + S
Sbjct: 131 KIMQDPDTGNSKGYAFINFASFDASDAAIEAMNGQYLCNRPITVSYAFKKDSKGE-RHGS 189
Query: 232 DAKSVVELTNGSSE 245
A+ ++ N S+
Sbjct: 190 AAERLLAAQNPLSQ 203
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/216 (21%), Positives = 96/216 (44%), Gaps = 44/216 (20%)
Query: 131 ASGQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSF 190
A+G + + ++VG L +V++ L+ F + + D+ TG+ +G+GFV F
Sbjct: 2 AAGPISERNQDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEF 61
Query: 191 RNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKET 250
+++DA AI + L + IR N K + +N++ L G++
Sbjct: 62 LSEEDADYAIKIMNMIKLYGKPIRVN---KASAHNKN-----------LDVGAN------ 101
Query: 251 TNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRD------KGFGF 304
+++GNL PE+ + L+ F + G +++ ++ +D KG+ F
Sbjct: 102 --------------IFIGNLDPEIDEKLLYDTFSAFGV-ILQTPKIMQDPDTGNSKGYAF 146
Query: 305 VRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSK 340
+ +++ + AI+ N YL + + S+ K
Sbjct: 147 INFASFDASDAAIEAMN---GQYLCNRPITVSYAFK 179
>gi|345782582|ref|XP_540295.3| PREDICTED: splicing factor 3B subunit 4 [Canis lupus familiaris]
Length = 424
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 63/194 (32%), Positives = 104/194 (53%), Gaps = 10/194 (5%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS-----YGFIHYFDRRSAAMAIL 112
+VYVG + +V+EPLL E+F GPV + KD+ + YGF+ + A AI
Sbjct: 14 TVYVGGLDEKVSEPLLWELFLQAGPVVNTHM-PKDRVTGQHQGYGFVEFLSEEDADYAIK 72
Query: 113 SLNGRHLFGQPIKVNWAYASGQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSC-SDA 171
+N L+G+PI+VN A A + D NIF+G+L PE+ + L+ FS +
Sbjct: 73 IMNMIKLYGKPIRVNKASAHNKNLDVGA--NIFIGNLDPEIDEKLLYDTFSAFGVILQTP 130
Query: 172 RVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSS 231
++M D TG S+G+ F++F + + +AI + G++L +R I ++A K E + S
Sbjct: 131 KIMRDPDTGNSKGYAFINFASFDASDAAIEAMNGQYLCNRPITVSYAFKKDSKGE-RHGS 189
Query: 232 DAKSVVELTNGSSE 245
A+ ++ N S+
Sbjct: 190 AAERLLAAQNPLSQ 203
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/216 (22%), Positives = 96/216 (44%), Gaps = 44/216 (20%)
Query: 131 ASGQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSF 190
A+G + + ++VG L +V++ L+ F + + D+ TG+ +G+GFV F
Sbjct: 2 AAGPISERNQDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEF 61
Query: 191 RNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKET 250
+++DA AI + L + IR N K + +N++ L G++
Sbjct: 62 LSEEDADYAIKIMNMIKLYGKPIRVN---KASAHNKN-----------LDVGAN------ 101
Query: 251 TNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRD------KGFGF 304
+++GNL PE+ + L+ F + G +++ ++ RD KG+ F
Sbjct: 102 --------------IFIGNLDPEIDEKLLYDTFSAFGV-ILQTPKIMRDPDTGNSKGYAF 146
Query: 305 VRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSK 340
+ +++ + AI+ N YL + + S+ K
Sbjct: 147 INFASFDASDAAIEAMN---GQYLCNRPITVSYAFK 179
>gi|194036296|ref|XP_001926524.1| PREDICTED: splicing factor 3B subunit 4 [Sus scrofa]
gi|344275508|ref|XP_003409554.1| PREDICTED: splicing factor 3B subunit 4-like [Loxodonta africana]
gi|417400717|gb|JAA47284.1| Putative splicing factor 3b subunit 4 [Desmodus rotundus]
Length = 424
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 63/194 (32%), Positives = 104/194 (53%), Gaps = 10/194 (5%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS-----YGFIHYFDRRSAAMAIL 112
+VYVG + +V+EPLL E+F GPV + KD+ + YGF+ + A AI
Sbjct: 14 TVYVGGLDEKVSEPLLWELFLQAGPVVNTHM-PKDRVTGQHQGYGFVEFLSEEDADYAIK 72
Query: 113 SLNGRHLFGQPIKVNWAYASGQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSC-SDA 171
+N L+G+PI+VN A A + D NIF+G+L PE+ + L+ FS +
Sbjct: 73 IMNMIKLYGKPIRVNKASAHNKNLDVGA--NIFIGNLDPEIDEKLLYDTFSAFGVILQTP 130
Query: 172 RVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSS 231
++M D TG S+G+ F++F + + +AI + G++L +R I ++A K E + S
Sbjct: 131 KIMRDPDTGNSKGYAFINFASFDASDAAIEAMNGQYLCNRPITVSYAFKKDSKGE-RHGS 189
Query: 232 DAKSVVELTNGSSE 245
A+ ++ N S+
Sbjct: 190 AAERLLAAQNPLSQ 203
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/203 (22%), Positives = 86/203 (42%), Gaps = 44/203 (21%)
Query: 144 IFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDL 203
++VG L +V++ L+ F + + D+ TG+ +G+GFV F +++DA AI +
Sbjct: 15 VYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYAIKIM 74
Query: 204 TGKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYT 263
L + IR N A+ N + N
Sbjct: 75 NMIKLYGKPIRVNKASA----------------------------HNKNLDVGAN----- 101
Query: 264 TVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRD------KGFGFVRYSTHAEAALAI 317
+++GNL PE+ + L+ F + G +++ ++ RD KG+ F+ +++ + AI
Sbjct: 102 -IFIGNLDPEIDEKLLYDTFSAFGV-ILQTPKIMRDPDTGNSKGYAFINFASFDASDAAI 159
Query: 318 QMGNTTQSSYLFGKQMKCSWGSK 340
+ N YL + + S+ K
Sbjct: 160 EAMN---GQYLCNRPITVSYAFK 179
>gi|348563863|ref|XP_003467726.1| PREDICTED: polyadenylate-binding protein 1-like [Cavia porcellus]
Length = 613
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 79/279 (28%), Positives = 131/279 (46%), Gaps = 43/279 (15%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIR----KDKSSYGFIHYFDRRSAAMAILS 113
S+YVG++H VTE +L E FS GP+ ++ R + Y +I++ A A+ +
Sbjct: 12 SLYVGDLHPDVTEAMLYETFSPVGPILSIRVCRDVATRRSLGYAYINFQQPADAERALDT 71
Query: 114 LNGRHLFGQPIKVNWAYAS-GQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDAR 172
+N + GQPI++ W+ G R+ SG N+F+ +L + L+ FS + + +
Sbjct: 72 MNFEVIKGQPIRIMWSQRDPGLRK--SGVGNVFIKNLEDSIDSKALYDTFSTFGNILSCK 129
Query: 173 VMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSSD 232
V D+ SRGFGFV F + AQ AI + G L R++ G+ + ++ +
Sbjct: 130 VACDEHG--SRGFGFVHFETNEAAQQAIGTMNGMLLNDRKV-------FVGHFKSQRERE 180
Query: 233 AKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIE 292
A E G + ++T +YV NL+ ++ + L F + G +
Sbjct: 181 A-----------ELGAQAL---------EFTNIYVKNLSVDMDEQGLQDLFFAFGN--ML 218
Query: 293 EVRVQRD-----KGFGFVRYSTHAEAALAIQMGNTTQSS 326
V+V RD +GFGFV + H EA A+ N + S
Sbjct: 219 SVKVMRDNSGHSRGFGFVNFEKHEEAQKAVDHMNGKEVS 257
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 82/302 (27%), Positives = 135/302 (44%), Gaps = 39/302 (12%)
Query: 49 PGFDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRRS 106
PG S +V++ N+ + L + FS+ G + CK+ + S +GF+H+ +
Sbjct: 91 PGLRKSGVGNVFIKNLEDSIDSKALYDTFSTFGNILSCKVACDEHGSRGFGFVHFETNEA 150
Query: 107 AAMAILSLNGRHLFGQPIKVNWAYASGQREDTSG-----HFNIFVGDLSPEVTDATLFAC 161
A AI ++NG L + + V + +RE G NI+V +LS ++ + L
Sbjct: 151 AQQAIGTMNGMLLNDRKVFVGHFKSQREREAELGAQALEFTNIYVKNLSVDMDEQGLQDL 210
Query: 162 FSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKG 221
F + + +VM D +G SRGFGFV+F ++AQ A++ + GK + +Q+ A K
Sbjct: 211 FFAFGNMLSVKVMRD-NSGHSRGFGFVNFEKHEEAQKAVDHMNGKEVSGQQLYVGRAQKR 269
Query: 222 AGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHR 281
A ++Q+ + +L K+ T N +YV NL ++ L
Sbjct: 270 A----ERQNELKRRFEQL--------KQDRQTRYRGVN-----LYVKNLDDSISDEKLRT 312
Query: 282 HFHSLGAGVIEEVRVQRD--KGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGS 339
F G +V + D KGFGFV +S+ EA A+ N C G+
Sbjct: 313 VFSPYGVITSAKVMTEGDHSKGFGFVCFSSPEEATKAVTEMN------------GCIVGT 360
Query: 340 KP 341
KP
Sbjct: 361 KP 362
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 87/181 (48%), Gaps = 20/181 (11%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDK---SSYGFIHYFDRRSAAMAILSL 114
++YV N+ + E LQ++F + G + K++R + +GF+++ A A+ +
Sbjct: 192 NIYVKNLSVDMDEQGLQDLFFAFGNMLSVKVMRDNSGHSRGFGFVNFEKHEEAQKAVDHM 251
Query: 115 NGRHLFGQPIKVNWAYASGQREDTSGH---------------FNIFVGDLSPEVTDATLF 159
NG+ + GQ + V A +R++ N++V +L ++D L
Sbjct: 252 NGKEVSGQQLYVGRAQKRAERQNELKRRFEQLKQDRQTRYRGVNLYVKNLDDSISDEKLR 311
Query: 160 ACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT 219
FS Y + A+VM + S+GFGFV F + ++A A+ ++ G +G++ + A
Sbjct: 312 TVFSPYGVITSAKVMTE--GDHSKGFGFVCFSSPEEATKAVTEMNGCIVGTKPLYVALAQ 369
Query: 220 K 220
+
Sbjct: 370 R 370
>gi|291399204|ref|XP_002715240.1| PREDICTED: poly A binding protein, cytoplasmic 4-like [Oryctolagus
cuniculus]
Length = 644
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 128/276 (46%), Gaps = 47/276 (17%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIR----KDKSSYGFIHYFDRRSAAMAILS 113
S+YVG++H+ VTE +L E FS GPV ++ R + Y ++++ A A+ +
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 114 LNGRHLFGQPIKVNWAYASGQREDT---SGHFNIFVGDLSPEVTDATLFACFSVYPSCSD 170
+N + G+PI++ W+ QR+ + SG N+F+ +L + + L+ FS + +
Sbjct: 72 MNFDVIKGKPIRIMWS----QRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 171 ARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQS 230
+V+ D+ S+G+ FV F Q+ A AI + G L R++ G + ++
Sbjct: 128 CKVVCDENG--SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFV-------GRFKSRKE 178
Query: 231 SDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGV 290
+A EL + E +T VY+ N EV L F G +
Sbjct: 179 REA----ELGAKAKE----------------FTNVYIKNFGEEVDDESLKDLFSQFGKTL 218
Query: 291 IEEVRVQRD-----KGFGFVRYSTHAEAALAIQMGN 321
V+V RD KGFGFV Y H +A A++ N
Sbjct: 219 --SVKVMRDPSGKSKGFGFVSYEKHEDANKAVEEMN 252
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 131/283 (46%), Gaps = 31/283 (10%)
Query: 52 DPSTCRS----VYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRR 105
DPS +S V++ N+ + L + FS+ G + CK++ + S Y F+H+ +
Sbjct: 90 DPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQE 149
Query: 106 SAAMAILSLNGRHLFGQPIKVNWAYASGQREDTSG-----HFNIFVGDLSPEVTDATLFA 160
+A AI +NG L + + V + +RE G N+++ + EV D +L
Sbjct: 150 AADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKD 209
Query: 161 CFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATK 220
FS + +VM D +G+S+GFGFVS+ +DA A+ ++ GK +G + I A K
Sbjct: 210 LFSQFGKTLSVKVMRD-PSGKSKGFGFVSYEKHEDANKAVEEMNGKEIGGKVIFVGRAQK 268
Query: 221 GAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLH 280
++Q+ EL + +E + Q +Y+ NL + L
Sbjct: 269 KV----ERQA-------ELKRKFEQLKQERISRY------QGVNLYIKNLDDTIDDEKLR 311
Query: 281 RHFHSLGAGVIEEVRVQ--RDKGFGFVRYSTHAEAALAIQMGN 321
+ F G+ +V ++ R KGFGFV +S+ EA A+ N
Sbjct: 312 KEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMN 354
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 88/181 (48%), Gaps = 20/181 (11%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRK---DKSSYGFIHYFDRRSAAMAILSL 114
+VY+ N +V + L+++FS G K++R +GF+ Y A A+ +
Sbjct: 192 NVYIKNFGEEVDDESLKDLFSQFGKTLSVKVMRDPSGKSKGFGFVSYEKHEDANKAVEEM 251
Query: 115 NGRHLFGQPIKVNWAYASGQR-------------EDTSGH--FNIFVGDLSPEVTDATLF 159
NG+ + G+ I V A +R E S + N+++ +L + D L
Sbjct: 252 NGKEIGGKVIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLR 311
Query: 160 ACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT 219
FS + S + A+VM + GRS+GFGFV F + ++A A+ ++ G+ +GS+ + A
Sbjct: 312 KEFSPFGSITSAKVMLED--GRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQ 369
Query: 220 K 220
+
Sbjct: 370 R 370
Score = 38.9 bits (89), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRRSAAMAILSLN 115
++Y+ N+ + + L++ FS G + K++ +D S +GF+ + A A+ +N
Sbjct: 295 NLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMN 354
Query: 116 GRHLFGQPIKVNWAYASGQRE 136
GR + +P+ V A +R+
Sbjct: 355 GRIVGSKPLYVALAQRKEERK 375
>gi|344236474|gb|EGV92577.1| Polyadenylate-binding protein 4 [Cricetulus griseus]
Length = 524
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 131/281 (46%), Gaps = 47/281 (16%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIR----KDKSSYGFIHYFDRRSAAMAILS 113
S+YVG++H+ VTE +L E FS GPV ++ R + Y ++++ A A+ +
Sbjct: 3 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 62
Query: 114 LNGRHLFGQPIKVNWAYASGQREDT---SGHFNIFVGDLSPEVTDATLFACFSVYPSCSD 170
+N + G+PI++ W+ QR+ + SG N+F+ +L + + L+ FS + +
Sbjct: 63 MNFDVIKGKPIRIMWS----QRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILS 118
Query: 171 ARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQS 230
+V+ D+ S+G+ FV F Q+ A AI + G L R++ G + ++
Sbjct: 119 CKVVCDENG--SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVF-------VGRFKSRKE 169
Query: 231 SDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGV 290
+A EL + E +T VY+ N EV +L F G +
Sbjct: 170 REA----ELGAKAKE----------------FTNVYIKNFGEEVDDDNLKELFSQFGKTL 209
Query: 291 IEEVRVQRD-----KGFGFVRYSTHAEAALAIQMGNTTQSS 326
V+V RD KGFGFV Y H +A A++ N + S
Sbjct: 210 --SVKVMRDPSGKSKGFGFVSYEKHEDANKAVEEMNGKEMS 248
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 127/279 (45%), Gaps = 31/279 (11%)
Query: 52 DPSTCRS----VYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRR 105
DPS +S V++ N+ + L + FS+ G + CK++ + S Y F+H+ +
Sbjct: 81 DPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQE 140
Query: 106 SAAMAILSLNGRHLFGQPIKVNWAYASGQREDTSG-----HFNIFVGDLSPEVTDATLFA 160
+A AI +NG L + + V + +RE G N+++ + EV D L
Sbjct: 141 AADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDDNLKE 200
Query: 161 CFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATK 220
FS + +VM D +G+S+GFGFVS+ +DA A+ ++ GK + + I A K
Sbjct: 201 LFSQFGKTLSVKVMRD-PSGKSKGFGFVSYEKHEDANKAVEEMNGKEMSGKAIFVGRAQK 259
Query: 221 GAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLH 280
++Q+ + +L + + Q +Y+ NL + L
Sbjct: 260 KV----ERQAELKRKFEQL-------------KQERISRYQGVNLYIKNLDDTIDDEKLR 302
Query: 281 RHFHSLGAGVIEEVRVQ--RDKGFGFVRYSTHAEAALAI 317
+ F G+ +V ++ R KGFGFV +S+ EA A+
Sbjct: 303 KEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAV 341
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 88/181 (48%), Gaps = 20/181 (11%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRK---DKSSYGFIHYFDRRSAAMAILSL 114
+VY+ N +V + L+E+FS G K++R +GF+ Y A A+ +
Sbjct: 183 NVYIKNFGEEVDDDNLKELFSQFGKTLSVKVMRDPSGKSKGFGFVSYEKHEDANKAVEEM 242
Query: 115 NGRHLFGQPIKVNWAYASGQR-------------EDTSGH--FNIFVGDLSPEVTDATLF 159
NG+ + G+ I V A +R E S + N+++ +L + D L
Sbjct: 243 NGKEMSGKAIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLR 302
Query: 160 ACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT 219
FS + S + A+VM + GRS+GFGFV F + ++A A+ ++ G+ +GS+ + A
Sbjct: 303 KEFSPFGSITSAKVMLED--GRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQ 360
Query: 220 K 220
+
Sbjct: 361 R 361
Score = 38.9 bits (89), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRRSAAMAILSLN 115
++Y+ N+ + + L++ FS G + K++ +D S +GF+ + A A+ +N
Sbjct: 286 NLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMN 345
Query: 116 GRHLFGQPIKVNWAYASGQRE 136
GR + +P+ V A +R+
Sbjct: 346 GRIVGSKPLYVALAQRKEERK 366
>gi|296228655|ref|XP_002759903.1| PREDICTED: splicing factor 3B subunit 4 [Callithrix jacchus]
Length = 424
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 63/194 (32%), Positives = 104/194 (53%), Gaps = 10/194 (5%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS-----YGFIHYFDRRSAAMAIL 112
+VYVG + +V+EPLL E+F GPV + KD+ + YGF+ + A AI
Sbjct: 14 TVYVGGLDEKVSEPLLWELFLQAGPVVNTHM-PKDRVTGQHQGYGFVEFLSEEDADYAIK 72
Query: 113 SLNGRHLFGQPIKVNWAYASGQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSC-SDA 171
+N L+G+PI+VN A A + D NIF+G+L PE+ + L+ FS +
Sbjct: 73 IMNMIKLYGKPIRVNKASAHNKNLDVGA--NIFIGNLDPEIDEKLLYDTFSAFGVILQTP 130
Query: 172 RVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSS 231
++M D TG S+G+ F++F + + +AI + G++L +R I ++A K E + S
Sbjct: 131 KIMRDPDTGNSKGYAFINFASFDASDAAIEAMNGQYLCNRPITVSYAFKKDSKGE-RHGS 189
Query: 232 DAKSVVELTNGSSE 245
A+ ++ N S+
Sbjct: 190 AAERLLAAQNPLSQ 203
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/216 (22%), Positives = 96/216 (44%), Gaps = 44/216 (20%)
Query: 131 ASGQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSF 190
A+G + + ++VG L +V++ L+ F + + D+ TG+ +G+GFV F
Sbjct: 2 AAGPISERNQDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEF 61
Query: 191 RNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKET 250
+++DA AI + L + IR N K + +N++ L G++
Sbjct: 62 LSEEDADYAIKIMNMIKLYGKPIRVN---KASAHNKN-----------LDVGAN------ 101
Query: 251 TNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRD------KGFGF 304
+++GNL PE+ + L+ F + G +++ ++ RD KG+ F
Sbjct: 102 --------------IFIGNLDPEIDEKLLYDTFSAFGV-ILQTPKIMRDPDTGNSKGYAF 146
Query: 305 VRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSK 340
+ +++ + AI+ N YL + + S+ K
Sbjct: 147 INFASFDASDAAIEAMN---GQYLCNRPITVSYAFK 179
>gi|5032069|ref|NP_005841.1| splicing factor 3B subunit 4 [Homo sapiens]
gi|386781627|ref|NP_001248161.1| splicing factor 3B subunit 4 [Macaca mulatta]
gi|114559210|ref|XP_513768.2| PREDICTED: splicing factor 3B subunit 4 isoform 4 [Pan troglodytes]
gi|397492924|ref|XP_003817370.1| PREDICTED: splicing factor 3B subunit 4 [Pan paniscus]
gi|402856043|ref|XP_003892612.1| PREDICTED: splicing factor 3B subunit 4 [Papio anubis]
gi|426331272|ref|XP_004026606.1| PREDICTED: splicing factor 3B subunit 4 [Gorilla gorilla gorilla]
gi|2500587|sp|Q15427.1|SF3B4_HUMAN RecName: Full=Splicing factor 3B subunit 4; AltName:
Full=Pre-mRNA-splicing factor SF3b 49 kDa subunit;
AltName: Full=SF3b50; AltName:
Full=Spliceosome-associated protein 49; Short=SAP 49
gi|556217|gb|AAA60300.1| spliceosomal protein [Homo sapiens]
gi|13279089|gb|AAH04273.1| Splicing factor 3b, subunit 4, 49kDa [Homo sapiens]
gi|15530216|gb|AAH13886.1| Splicing factor 3b, subunit 4, 49kDa [Homo sapiens]
gi|55960588|emb|CAI12648.1| splicing factor 3b, subunit 4, 49kDa [Homo sapiens]
gi|55960980|emb|CAI12554.1| splicing factor 3b, subunit 4, 49kDa [Homo sapiens]
gi|60688325|gb|AAH90883.1| Splicing factor 3b, subunit 4, 49kDa [Homo sapiens]
gi|119573980|gb|EAW53595.1| splicing factor 3b, subunit 4, 49kDa [Homo sapiens]
gi|123989960|gb|ABM83897.1| splicing factor 3b, subunit 4, 49kDa [synthetic construct]
gi|123999284|gb|ABM87219.1| splicing factor 3b, subunit 4, 49kDa [synthetic construct]
gi|157928508|gb|ABW03550.1| splicing factor 3b, subunit 4, 49kDa [synthetic construct]
gi|261859948|dbj|BAI46496.1| splicing factor 3b, subunit 4, 49kDa [synthetic construct]
gi|355745635|gb|EHH50260.1| hypothetical protein EGM_01064 [Macaca fascicularis]
gi|380808686|gb|AFE76218.1| splicing factor 3B subunit 4 [Macaca mulatta]
gi|383415041|gb|AFH30734.1| splicing factor 3B subunit 4 [Macaca mulatta]
gi|410207952|gb|JAA01195.1| splicing factor 3b, subunit 4, 49kDa [Pan troglodytes]
gi|410251462|gb|JAA13698.1| splicing factor 3b, subunit 4, 49kDa [Pan troglodytes]
gi|410292418|gb|JAA24809.1| splicing factor 3b, subunit 4, 49kDa [Pan troglodytes]
gi|410337561|gb|JAA37727.1| splicing factor 3b, subunit 4, 49kDa [Pan troglodytes]
Length = 424
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 63/194 (32%), Positives = 104/194 (53%), Gaps = 10/194 (5%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS-----YGFIHYFDRRSAAMAIL 112
+VYVG + +V+EPLL E+F GPV + KD+ + YGF+ + A AI
Sbjct: 14 TVYVGGLDEKVSEPLLWELFLQAGPVVNTHM-PKDRVTGQHQGYGFVEFLSEEDADYAIK 72
Query: 113 SLNGRHLFGQPIKVNWAYASGQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSC-SDA 171
+N L+G+PI+VN A A + D NIF+G+L PE+ + L+ FS +
Sbjct: 73 IMNMIKLYGKPIRVNKASAHNKNLDVGA--NIFIGNLDPEIDEKLLYDTFSAFGVILQTP 130
Query: 172 RVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSS 231
++M D TG S+G+ F++F + + +AI + G++L +R I ++A K E + S
Sbjct: 131 KIMRDPDTGNSKGYAFINFASFDASDAAIEAMNGQYLCNRPITVSYAFKKDSKGE-RHGS 189
Query: 232 DAKSVVELTNGSSE 245
A+ ++ N S+
Sbjct: 190 AAERLLAAQNPLSQ 203
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/216 (22%), Positives = 96/216 (44%), Gaps = 44/216 (20%)
Query: 131 ASGQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSF 190
A+G + + ++VG L +V++ L+ F + + D+ TG+ +G+GFV F
Sbjct: 2 AAGPISERNQDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEF 61
Query: 191 RNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKET 250
+++DA AI + L + IR N K + +N++ L G++
Sbjct: 62 LSEEDADYAIKIMNMIKLYGKPIRVN---KASAHNKN-----------LDVGAN------ 101
Query: 251 TNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRD------KGFGF 304
+++GNL PE+ + L+ F + G +++ ++ RD KG+ F
Sbjct: 102 --------------IFIGNLDPEIDEKLLYDTFSAFGV-ILQTPKIMRDPDTGNSKGYAF 146
Query: 305 VRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSK 340
+ +++ + AI+ N YL + + S+ K
Sbjct: 147 INFASFDASDAAIEAMN---GQYLCNRPITVSYAFK 179
>gi|126313662|ref|XP_001365466.1| PREDICTED: splicing factor 3B subunit 4-like [Monodelphis
domestica]
Length = 424
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 63/194 (32%), Positives = 104/194 (53%), Gaps = 10/194 (5%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS-----YGFIHYFDRRSAAMAIL 112
+VYVG + +V+EPLL E+F GPV + KD+ + YGF+ + A AI
Sbjct: 14 TVYVGGLDEKVSEPLLWELFLQAGPVVNTHM-PKDRVTGQHQGYGFVEFLSEEDADYAIK 72
Query: 113 SLNGRHLFGQPIKVNWAYASGQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSC-SDA 171
+N L+G+PI+VN A A + D NIF+G+L PE+ + L+ FS +
Sbjct: 73 IMNMIKLYGKPIRVNKASAHNKNLDVGA--NIFIGNLDPEIDEKLLYDTFSAFGVILQTP 130
Query: 172 RVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSS 231
++M D TG S+G+ F++F + + +AI + G++L +R I ++A K E + S
Sbjct: 131 KIMRDPDTGNSKGYAFINFASFDASDAAIEAMNGQYLCNRPITVSYAFKKDSKGE-RHGS 189
Query: 232 DAKSVVELTNGSSE 245
A+ ++ N S+
Sbjct: 190 AAERLLAAQNPLSQ 203
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/216 (22%), Positives = 96/216 (44%), Gaps = 44/216 (20%)
Query: 131 ASGQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSF 190
A+G + + ++VG L +V++ L+ F + + D+ TG+ +G+GFV F
Sbjct: 2 AAGPISERNQDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEF 61
Query: 191 RNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKET 250
+++DA AI + L + IR N K + +N++ L G++
Sbjct: 62 LSEEDADYAIKIMNMIKLYGKPIRVN---KASAHNKN-----------LDVGAN------ 101
Query: 251 TNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRD------KGFGF 304
+++GNL PE+ + L+ F + G +++ ++ RD KG+ F
Sbjct: 102 --------------IFIGNLDPEIDEKLLYDTFSAFGV-ILQTPKIMRDPDTGNSKGYAF 146
Query: 305 VRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSK 340
+ +++ + AI+ N YL + + S+ K
Sbjct: 147 INFASFDASDAAIEAMN---GQYLCNRPITVSYAFK 179
>gi|410968226|ref|XP_004001545.1| PREDICTED: LOW QUALITY PROTEIN: splicing factor 3B subunit 4 [Felis
catus]
Length = 424
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 63/194 (32%), Positives = 104/194 (53%), Gaps = 10/194 (5%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS-----YGFIHYFDRRSAAMAIL 112
+VYVG + +V+EPLL E+F GPV + KD+ + YGF+ + A AI
Sbjct: 14 TVYVGGLDEKVSEPLLWELFLQAGPVVNTHM-PKDRVTGQHQGYGFVEFLSEEDADYAIK 72
Query: 113 SLNGRHLFGQPIKVNWAYASGQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSC-SDA 171
+N L+G+PI+VN A A + D NIF+G+L PE+ + L+ FS +
Sbjct: 73 IMNMIKLYGKPIRVNKASAHNKNLDVGA--NIFIGNLDPEIDEKLLYDTFSAFGVILQTP 130
Query: 172 RVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSS 231
++M D TG S+G+ F++F + + +AI + G++L +R I ++A K E + S
Sbjct: 131 KIMRDPDTGNSKGYAFINFASFDASDAAIEAMNGQYLCNRPITVSYAFKKDSKGE-RHGS 189
Query: 232 DAKSVVELTNGSSE 245
A+ ++ N S+
Sbjct: 190 AAERLLAAQNPLSQ 203
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/216 (21%), Positives = 91/216 (42%), Gaps = 44/216 (20%)
Query: 131 ASGQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSF 190
A+G + + ++VG L +V++ L+ F + + D+ TG+ +G+GFV F
Sbjct: 2 AAGPISERNQDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEF 61
Query: 191 RNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKET 250
+++DA AI + L + IR N A+
Sbjct: 62 LSEEDADYAIKIMNMIKLYGKPIRVNKASA----------------------------HN 93
Query: 251 TNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRD------KGFGF 304
N + N +++GNL PE+ + L+ F + G +++ ++ RD KG+ F
Sbjct: 94 KNLDVGAN------IFIGNLDPEIDEKLLYDTFSAFGV-ILQTPKIMRDPDTGNSKGYAF 146
Query: 305 VRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSK 340
+ +++ + AI+ N YL + + S+ K
Sbjct: 147 INFASFDASDAAIEAMN---GQYLCNRPITVSYAFK 179
>gi|329663420|ref|NP_001192513.1| splicing factor 3B subunit 4 [Bos taurus]
gi|395856067|ref|XP_003800464.1| PREDICTED: splicing factor 3B subunit 4 [Otolemur garnettii]
gi|426216470|ref|XP_004002485.1| PREDICTED: splicing factor 3B subunit 4 [Ovis aries]
gi|281346199|gb|EFB21783.1| hypothetical protein PANDA_020653 [Ailuropoda melanoleuca]
gi|296489611|tpg|DAA31724.1| TPA: splicing factor 3b, subunit 4, 49kDa [Bos taurus]
Length = 424
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 63/194 (32%), Positives = 104/194 (53%), Gaps = 10/194 (5%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS-----YGFIHYFDRRSAAMAIL 112
+VYVG + +V+EPLL E+F GPV + KD+ + YGF+ + A AI
Sbjct: 14 TVYVGGLDEKVSEPLLWELFLQAGPVVNTHM-PKDRVTGQHQGYGFVEFLSEEDADYAIK 72
Query: 113 SLNGRHLFGQPIKVNWAYASGQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSC-SDA 171
+N L+G+PI+VN A A + D NIF+G+L PE+ + L+ FS +
Sbjct: 73 IMNMIKLYGKPIRVNKASAHNKNLDVGA--NIFIGNLDPEIDEKLLYDTFSAFGVILQTP 130
Query: 172 RVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSS 231
++M D TG S+G+ F++F + + +AI + G++L +R I ++A K E + S
Sbjct: 131 KIMRDPDTGNSKGYAFINFASFDASDAAIEAMNGQYLCNRPITVSYAFKKDSKGE-RHGS 189
Query: 232 DAKSVVELTNGSSE 245
A+ ++ N S+
Sbjct: 190 AAERLLAAQNPLSQ 203
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/216 (21%), Positives = 91/216 (42%), Gaps = 44/216 (20%)
Query: 131 ASGQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSF 190
A+G + + ++VG L +V++ L+ F + + D+ TG+ +G+GFV F
Sbjct: 2 AAGPISERNQDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEF 61
Query: 191 RNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKET 250
+++DA AI + L + IR N A+
Sbjct: 62 LSEEDADYAIKIMNMIKLYGKPIRVNKASA----------------------------HN 93
Query: 251 TNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRD------KGFGF 304
N + N +++GNL PE+ + L+ F + G +++ ++ RD KG+ F
Sbjct: 94 KNLDVGAN------IFIGNLDPEIDEKLLYDTFSAFGV-ILQTPKIMRDPDTGNSKGYAF 146
Query: 305 VRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSK 340
+ +++ + AI+ N YL + + S+ K
Sbjct: 147 INFASFDASDAAIEAMN---GQYLCNRPITVSYAFK 179
>gi|440797982|gb|ELR19056.1| spliceosomal protein, putative [Acanthamoeba castellanii str. Neff]
Length = 316
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 63/190 (33%), Positives = 104/190 (54%), Gaps = 9/190 (4%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS-----YGFIHYFDRRSAAMAIL 112
+VYVG + ++V+E LL E+ +GPV I KDK + YGF+ + A AI
Sbjct: 12 TVYVGELDSRVSEALLWELMLQSGPVVNV-YIPKDKLTNLHQGYGFVEFATEEDAEYAIK 70
Query: 113 SLNGRHLFGQPIKVNWAYASGQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSC-SDA 171
+N L+G+P++VN A G+ D N+F+G+L EV + L+ FS + +
Sbjct: 71 IMNMIKLYGKPLRVNKAKRDGKTVDVGA--NLFIGNLDAEVDEKLLYDTFSAFGVIITTP 128
Query: 172 RVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSS 231
++M D +TG SRGFGFVSF + + + +AI + ++L +R I ++A K ++ S
Sbjct: 129 KIMRDPETGESRGFGFVSFDSFESSDAAIESMNNQYLCNRAITVSYAIKKDSKTGERHGS 188
Query: 232 DAKSVVELTN 241
A+ ++ N
Sbjct: 189 AAERLLAANN 198
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 90/212 (42%), Gaps = 44/212 (20%)
Query: 135 REDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQ 194
RE+ + ++VG+L V++A L+ + + D+ T +G+GFV F ++
Sbjct: 4 REERNQDATVYVGELDSRVSEALLWELMLQSGPVVNVYIPKDKLTNLHQGYGFVEFATEE 63
Query: 195 DAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTE 254
DA+ AI + L + +R N A + DGK T +
Sbjct: 64 DAEYAIKIMNMIKLYGKPLRVNKAKR-------------------------DGK-TVDVG 97
Query: 255 APENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRD------KGFGFVRYS 308
A +++GNL EV + L+ F + G +I ++ RD +GFGFV +
Sbjct: 98 A--------NLFIGNLDAEVDEKLLYDTFSAFGV-IITTPKIMRDPETGESRGFGFVSFD 148
Query: 309 THAEAALAIQMGNTTQSSYLFGKQMKCSWGSK 340
+ + AI+ N + YL + + S+ K
Sbjct: 149 SFESSDAAIESMN---NQYLCNRAITVSYAIK 177
>gi|361131740|gb|EHL03392.1| putative Uncharacterized RNA-binding protein C23E6.01c [Glarea
lozoyensis 74030]
Length = 391
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 88/303 (29%), Positives = 135/303 (44%), Gaps = 47/303 (15%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS---YGFIHYFDRRSAAMAILSL 114
++++G + + E ++ V+ G K+IR S Y FI F +AA LSL
Sbjct: 74 TLWMGELEPWIDENFIRSVWFGMGEQVNVKMIRDKFSGNAGYCFID-FSSPAAAAKALSL 132
Query: 115 NGRHLFGQPIKVNWAYASGQREDTSGHFNIFVGDLSPEVTDATLFACFSV-YPSCSDARV 173
NG +D F+IFVGDL PEV + L + F +PSC A++
Sbjct: 133 NG-------------------DDRGPEFSIFVGDLGPEVNEYVLVSLFQARFPSCKSAKI 173
Query: 174 MWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSSDA 233
M D +G SRG+GFV F ++QD Q A+ ++ G + G+R +R + AT + +
Sbjct: 174 MTDPISGMSRGYGFVRFADEQDQQRALTEMQGVYCGNRPMRISTATPKNKSGGAGGPAGM 233
Query: 234 KSVVELTNGSSEDGKETTNTE-------------APE-----NNPQYTTVYVGNLAPEVT 275
G + G AP+ +P TTV+VG L+ VT
Sbjct: 234 PMQGGGGMGGGQPGGMGAPGMYSMGAPPQLGYYGAPQPMNQFTDPNNTTVFVGGLSGYVT 293
Query: 276 QLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKC 335
+ +L F G G I V++ KG GFV++ A +AI N Q + +++
Sbjct: 294 EDELRSFFQ--GFGEITYVKIPPGKGCGFVQFVQRHAAEMAI---NQMQGYPIGNSRVRL 348
Query: 336 SWG 338
SWG
Sbjct: 349 SWG 351
>gi|218202287|gb|EEC84714.1| hypothetical protein OsI_31675 [Oryza sativa Indica Group]
Length = 377
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 85/271 (31%), Positives = 128/271 (47%), Gaps = 40/271 (14%)
Query: 83 VEGCKLIRKDKSS----YGFIHYFDRRSAAMAILSLNGRHLF---GQPIKVNWAYAS--G 133
V K+IR ++ YGF+ ++ +A + G H+ QP ++NWA S
Sbjct: 77 VVAIKVIRNKQTGQSEGYGFVEFYSHAAAEKVLEGFAG-HIMPNTDQPFRINWASFSMGD 135
Query: 134 QREDTSGHFNIFVGDLSPEVTDATLFACFSV-YPSCSDARVMWDQKTGRSRGFGFVSFRN 192
+R D + +IFVGDL+ +V D TL FS Y S A+V+ D TGRS+G+GFV F +
Sbjct: 136 RRSDIASDHSIFVGDLASDVNDTTLLETFSKRYSSVKGAKVVIDANTGRSKGYGFVRFGD 195
Query: 193 QQDAQSAINDLTGKWLGSRQIRCNWAT-KGAGNNEDKQSSDAKSVVELTNGSSEDGKETT 251
+ A+ ++ G + +R +R AT + S A+S +LTN
Sbjct: 196 DNEKTHAMTEMNGVYCSTRPMRIGPATPRKTSGTSGPTGSAARSDGDLTN---------- 245
Query: 252 NTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHA 311
TTV+VG L P V++ DL + F G I V++ K GFV++
Sbjct: 246 -----------TTVFVGGLDPNVSEDDLRQTFSQYGE--ISSVKIPVGKQCGFVQFVQRK 292
Query: 312 EAALAIQMGNTTQSSYLFGKQ-MKCSWGSKP 341
A A+Q N + GKQ ++ SWG P
Sbjct: 293 NAEDALQGLNGS----TIGKQTVRLSWGRNP 319
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 84/184 (45%), Gaps = 23/184 (12%)
Query: 52 DPSTCRSVYVGNIHTQVTEPLLQEVFSST-GPVEGCKLIRKDKSS----YGFIHYFDRRS 106
D ++ S++VG++ + V + L E FS V+G K++ + YGF+ + D
Sbjct: 139 DIASDHSIFVGDLASDVNDTTLLETFSKRYSSVKGAKVVIDANTGRSKGYGFVRFGDDNE 198
Query: 107 AAMAILSLNGRHLFGQPIKVNWAY-----------ASGQREDTS-GHFNIFVGDLSPEVT 154
A+ +NG + +P+++ A S R D + +FVG L P V+
Sbjct: 199 KTHAMTEMNGVYCSTRPMRIGPATPRKTSGTSGPTGSAARSDGDLTNTTVFVGGLDPNVS 258
Query: 155 DATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIR 214
+ L FS Y S ++ ++ G FV F +++A+ A+ L G +G + +R
Sbjct: 259 EDDLRQTFSQYGEISSVKIPVGKQCG------FVQFVQRKNAEDALQGLNGSTIGKQTVR 312
Query: 215 CNWA 218
+W
Sbjct: 313 LSWG 316
>gi|444515113|gb|ELV10775.1| Splicing factor 3B subunit 4 [Tupaia chinensis]
Length = 355
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 63/194 (32%), Positives = 104/194 (53%), Gaps = 10/194 (5%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS-----YGFIHYFDRRSAAMAIL 112
+VYVG + +V+EPLL E+F GPV + KD+ + YGF+ + A AI
Sbjct: 14 TVYVGGLDEKVSEPLLWELFLQAGPVVNTHM-PKDRVTGQHQGYGFVEFLSEEDADYAIK 72
Query: 113 SLNGRHLFGQPIKVNWAYASGQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSC-SDA 171
+N L+G+PI+VN A A + D NIF+G+L PE+ + L+ FS +
Sbjct: 73 IMNMIKLYGKPIRVNKASAHNKNLDVGA--NIFIGNLDPEIDEKLLYDTFSAFGVILQTP 130
Query: 172 RVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSS 231
++M D TG S+G+ F++F + + +AI + G++L +R I ++A K E + S
Sbjct: 131 KIMRDPDTGNSKGYAFINFASFDASDAAIEAMNGQYLCNRPITVSYAFKKDSKGE-RHGS 189
Query: 232 DAKSVVELTNGSSE 245
A+ ++ N S+
Sbjct: 190 AAERLLAAQNPLSQ 203
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/216 (21%), Positives = 91/216 (42%), Gaps = 44/216 (20%)
Query: 131 ASGQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSF 190
A+G + + ++VG L +V++ L+ F + + D+ TG+ +G+GFV F
Sbjct: 2 AAGPISERNQDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEF 61
Query: 191 RNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKET 250
+++DA AI + L + IR N A+
Sbjct: 62 LSEEDADYAIKIMNMIKLYGKPIRVNKAS----------------------------AHN 93
Query: 251 TNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRD------KGFGF 304
N + N +++GNL PE+ + L+ F + G +++ ++ RD KG+ F
Sbjct: 94 KNLDVGAN------IFIGNLDPEIDEKLLYDTFSAFGV-ILQTPKIMRDPDTGNSKGYAF 146
Query: 305 VRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSK 340
+ +++ + AI+ N YL + + S+ K
Sbjct: 147 INFASFDASDAAIEAMN---GQYLCNRPITVSYAFK 179
>gi|431896603|gb|ELK06015.1| Splicing factor 3B subunit 4 [Pteropus alecto]
Length = 424
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 63/194 (32%), Positives = 104/194 (53%), Gaps = 10/194 (5%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS-----YGFIHYFDRRSAAMAIL 112
+VYVG + +V+EPLL E+F GPV + KD+ + YGF+ + A AI
Sbjct: 14 TVYVGGLDEKVSEPLLWELFLQAGPVVNTHM-PKDRVTGQHQGYGFVEFLSEEDADYAIK 72
Query: 113 SLNGRHLFGQPIKVNWAYASGQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSC-SDA 171
+N L+G+PI+VN A A + D NIF+G+L PE+ + L+ FS +
Sbjct: 73 IMNMIKLYGKPIRVNKASAHNKNLDVGA--NIFIGNLDPEIDEKLLYDTFSAFGVILQTP 130
Query: 172 RVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSS 231
++M D TG S+G+ F++F + + +AI + G++L +R I ++A K E + S
Sbjct: 131 KIMRDPDTGNSKGYAFINFASFDASDAAIEAMNGQYLCNRPITVSYAFKKDSKGE-RHGS 189
Query: 232 DAKSVVELTNGSSE 245
A+ ++ N S+
Sbjct: 190 AAERLLAAQNPLSQ 203
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/216 (21%), Positives = 91/216 (42%), Gaps = 44/216 (20%)
Query: 131 ASGQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSF 190
A+G + + ++VG L +V++ L+ F + + D+ TG+ +G+GFV F
Sbjct: 2 AAGPISERNQDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEF 61
Query: 191 RNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKET 250
+++DA AI + L + IR N A+
Sbjct: 62 LSEEDADYAIKIMNMIKLYGKPIRVNKASA----------------------------HN 93
Query: 251 TNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRD------KGFGF 304
N + N +++GNL PE+ + L+ F + G +++ ++ RD KG+ F
Sbjct: 94 KNLDVGAN------IFIGNLDPEIDEKLLYDTFSAFGV-ILQTPKIMRDPDTGNSKGYAF 146
Query: 305 VRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSK 340
+ +++ + AI+ N YL + + S+ K
Sbjct: 147 INFASFDASDAAIEAMN---GQYLCNRPITVSYAFK 179
>gi|23346437|ref|NP_694693.1| splicing factor 3B subunit 4 [Mus musculus]
gi|58865472|ref|NP_001011951.1| splicing factor 3B subunit 4 [Rattus norvegicus]
gi|354472911|ref|XP_003498680.1| PREDICTED: splicing factor 3B subunit 4-like [Cricetulus griseus]
gi|81910895|sp|Q6AYL5.1|SF3B4_RAT RecName: Full=Splicing factor 3B subunit 4
gi|81914822|sp|Q8QZY9.1|SF3B4_MOUSE RecName: Full=Splicing factor 3B subunit 4
gi|20071686|gb|AAH26567.1| Splicing factor 3b, subunit 4 [Mus musculus]
gi|26338948|dbj|BAC33145.1| unnamed protein product [Mus musculus]
gi|37537250|gb|AAH24418.3| Splicing factor 3b, subunit 4 [Mus musculus]
gi|50925599|gb|AAH78997.1| Splicing factor 3b, subunit 4 [Rattus norvegicus]
gi|55391441|gb|AAH85273.1| Splicing factor 3b, subunit 4 [Mus musculus]
gi|74183317|dbj|BAE22576.1| unnamed protein product [Mus musculus]
gi|148706922|gb|EDL38869.1| splicing factor 3b, subunit 4 [Mus musculus]
gi|149030610|gb|EDL85647.1| rCG51900 [Rattus norvegicus]
gi|344238680|gb|EGV94783.1| Splicing factor 3B subunit 4 [Cricetulus griseus]
Length = 424
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 63/194 (32%), Positives = 104/194 (53%), Gaps = 10/194 (5%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS-----YGFIHYFDRRSAAMAIL 112
+VYVG + +V+EPLL E+F GPV + KD+ + YGF+ + A AI
Sbjct: 14 TVYVGGLDEKVSEPLLWELFLQAGPVVNTHM-PKDRVTGQHQGYGFVEFLSEEDADYAIK 72
Query: 113 SLNGRHLFGQPIKVNWAYASGQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSC-SDA 171
+N L+G+PI+VN A A + D NIF+G+L PE+ + L+ FS +
Sbjct: 73 IMNMIKLYGKPIRVNKASAHNKNLDVGA--NIFIGNLDPEIDEKLLYDTFSAFGVILQTP 130
Query: 172 RVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSS 231
++M D TG S+G+ F++F + + +AI + G++L +R I ++A K E + S
Sbjct: 131 KIMRDPDTGNSKGYAFINFASFDASDAAIEAMNGQYLCNRPITVSYAFKKDSKGE-RHGS 189
Query: 232 DAKSVVELTNGSSE 245
A+ ++ N S+
Sbjct: 190 AAERLLAAQNPLSQ 203
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/216 (22%), Positives = 96/216 (44%), Gaps = 44/216 (20%)
Query: 131 ASGQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSF 190
A+G + + ++VG L +V++ L+ F + + D+ TG+ +G+GFV F
Sbjct: 2 AAGPISERNQDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEF 61
Query: 191 RNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKET 250
+++DA AI + L + IR N K + +N++ L G++
Sbjct: 62 LSEEDADYAIKIMNMIKLYGKPIRVN---KASAHNKN-----------LDVGAN------ 101
Query: 251 TNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRD------KGFGF 304
+++GNL PE+ + L+ F + G +++ ++ RD KG+ F
Sbjct: 102 --------------IFIGNLDPEIDEKLLYDTFSAFGV-ILQTPKIMRDPDTGNSKGYAF 146
Query: 305 VRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSK 340
+ +++ + AI+ N YL + + S+ K
Sbjct: 147 INFASFDASDAAIEAMN---GQYLCNRPITVSYAFK 179
>gi|224094731|ref|XP_002310211.1| predicted protein [Populus trichocarpa]
gi|222853114|gb|EEE90661.1| predicted protein [Populus trichocarpa]
Length = 184
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 61/169 (36%), Positives = 97/169 (57%), Gaps = 9/169 (5%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS-----YGFIHYFDRRSAAMAIL 112
+ YVGN+ QV+E LL E+F GPV + KD+ + YGF+ + A AI
Sbjct: 7 TAYVGNLDPQVSEELLWELFVQAGPVVNV-YVPKDRVTNLHQGYGFVEFRSEEDADYAIK 65
Query: 113 SLNGRHLFGQPIKVNWAYASGQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPS-CSDA 171
LN L+G+PI+VN A + D N+F+G+L P+V + L FS + ++
Sbjct: 66 VLNMIKLYGKPIRVNKASQDKKSLDVGA--NLFIGNLDPDVDEKLLHDTFSAFGVIVTNP 123
Query: 172 RVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATK 220
++M D +TG SRGFGF+S+ + + + +AI + G++L +RQI ++A K
Sbjct: 124 KIMRDPETGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYK 172
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 91/207 (43%), Gaps = 44/207 (21%)
Query: 145 FVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLT 204
+VG+L P+V++ L+ F + V D+ T +G+GFV FR+++DA AI L
Sbjct: 9 YVGNLDPQVSEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 68
Query: 205 GKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTT 264
L + IR N A+ +DK+S D +
Sbjct: 69 MIKLYGKPIRVNKAS------QDKKSLDVGA----------------------------N 94
Query: 265 VYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRD------KGFGFVRYSTHAEAALAIQ 318
+++GNL P+V + LH F + G ++ ++ RD +GFGF+ Y + + AI+
Sbjct: 95 LFIGNLDPDVDEKLLHDTFSAFGV-IVTNPKIMRDPETGNSRGFGFISYDSFEASDAAIE 153
Query: 319 MGNTTQSSYLFGKQMKCSWGSKPTPPG 345
N YL +Q+ S+ K G
Sbjct: 154 AMN---GQYLCNRQITVSYAYKKDTKG 177
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 49/89 (55%), Gaps = 9/89 (10%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS-----YGFIHYFDRRSAAMAIL 112
++++GN+ V E LL + FS+ G + I +D + +GFI Y ++ AI
Sbjct: 94 NLFIGNLDPDVDEKLLHDTFSAFGVIVTNPKIMRDPETGNSRGFGFISYDSFEASDAAIE 153
Query: 113 SLNGRHLFGQPIKVNWAYASGQREDTSGH 141
++NG++L + I V++AY ++DT G
Sbjct: 154 AMNGQYLCNRQITVSYAY----KKDTKGE 178
Score = 41.2 bits (95), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 47/86 (54%), Gaps = 11/86 (12%)
Query: 261 QYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDK------GFGFVRYSTHAEAA 314
Q T YVGNL P+V++ L F + AG + V V +D+ G+GFV + + +A
Sbjct: 4 QDATAYVGNLDPQVSEELLWELF--VQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDAD 61
Query: 315 LAIQMGNTTQSSYLFGKQMKCSWGSK 340
AI++ N + L+GK ++ + S+
Sbjct: 62 YAIKVLNMIK---LYGKPIRVNKASQ 84
>gi|307207781|gb|EFN85399.1| Polyadenylate-binding protein 1 [Harpegnathos saltator]
Length = 552
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 134/279 (48%), Gaps = 16/279 (5%)
Query: 49 PGFDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIR----KDKSSYGFIHYFDR 104
PG S+YVG++HT +TE +L E FSS GPV ++ R + Y ++++
Sbjct: 3 PGAPNYPMASLYVGDLHTDITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQQP 62
Query: 105 RSAAMAILSLNGRHLFGQPIKVNWAYASGQREDT---SGHFNIFVGDLSPEVTDATLFAC 161
A A+ ++N + G+PI++ W+ QR+ + SG N+F+ +L + + ++
Sbjct: 63 ADAERALDTMNFDMIKGRPIRIMWS----QRDPSLRKSGVGNVFIKNLDKNIDNKAMYDT 118
Query: 162 FSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRC-NWATK 220
FS + + +V D+ +G S+G+GFV F ++ A +I+ + G L +++ + +
Sbjct: 119 FSAFGNILSCKVAQDE-SGASKGYGFVHFETEEAANKSIDKVNGMLLNGKKVYVGKFIPR 177
Query: 221 GAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLH 280
E + + + V + N + E E N Q +YV NL + L
Sbjct: 178 KEREKELGEKAKLFTNVYVKNFELKRKFEQLKIER-LNRYQGVNLYVKNLDDTIDDERLR 236
Query: 281 RHFHSLGAGVIEEVRVQ--RDKGFGFVRYSTHAEAALAI 317
+ F G +V ++ R KGFGFV +S EA A+
Sbjct: 237 KEFTPFGTITSAKVMMEEGRSKGFGFVCFSQPEEATKAV 275
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 97/218 (44%), Gaps = 45/218 (20%)
Query: 52 DPSTCRS----VYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS---YGFIHYFDR 104
DPS +S V++ N+ + + + FS+ G + CK+ + + + YGF+H+
Sbjct: 90 DPSLRKSGVGNVFIKNLDKNIDNKAMYDTFSAFGNILSCKVAQDESGASKGYGFVHFETE 149
Query: 105 RSAAMAILSLNGRHLFGQPIKVNWAYASGQREDTSGH----------------------- 141
+A +I +NG L G+ + V +RE G
Sbjct: 150 EAANKSIDKVNGMLLNGKKVYVGKFIPRKEREKELGEKAKLFTNVYVKNFELKRKFEQLK 209
Query: 142 ---------FNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRN 192
N++V +L + D L F+ + + + A+VM ++ GRS+GFGFV F
Sbjct: 210 IERLNRYQGVNLYVKNLDDTIDDERLRKEFTPFGTITSAKVMMEE--GRSKGFGFVCFSQ 267
Query: 193 QQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQS 230
++A A+ ++ G+ +GS+ + A + ED+++
Sbjct: 268 PEEATKAVTEMNGRIVGSKPLYVALAQR----KEDRKA 301
>gi|194044632|ref|XP_001927442.1| PREDICTED: poly(A) binding protein, cytoplasmic 1-like [Sus scrofa]
Length = 610
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 81/279 (29%), Positives = 131/279 (46%), Gaps = 43/279 (15%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIR----KDKSSYGFIHYFDRRSAAMAILS 113
S+YVG++H VTE +L E FS GP+ ++ R + Y +I++ A A+ +
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADAERALDT 71
Query: 114 LNGRHLFGQPIKVNWAYAS-GQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDAR 172
+N + GQPI++ W+ G R+ SG N+F+ +L + + L+ FS + + +
Sbjct: 72 MNFEVIKGQPIRIMWSQRDPGLRK--SGVGNVFIKNLEDSIDNKALYDTFSTFGNILSCK 129
Query: 173 VMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSSD 232
V+ D SRGFGFV F + AQ+AI + G L R++ G+ + ++ +
Sbjct: 130 VVCDDHG--SRGFGFVHFETHEAAQNAIRTMNGMLLNDRKV-------FVGHFKSRRERE 180
Query: 233 AKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIE 292
A EL + E +T +YV NL +V + L F G I
Sbjct: 181 A----ELGARALE----------------FTNIYVKNLHVDVDERCLQDLFSQFGK--IL 218
Query: 293 EVRVQRD-----KGFGFVRYSTHAEAALAIQMGNTTQSS 326
V+V RD +GFGFV + H +A A+ N + S
Sbjct: 219 SVKVMRDDSGHSRGFGFVNFEKHEDAQKAVTDMNGKEVS 257
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/283 (28%), Positives = 124/283 (43%), Gaps = 29/283 (10%)
Query: 49 PGFDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRRS 106
PG S +V++ N+ + L + FS+ G + CK++ D S +GF+H+ +
Sbjct: 91 PGLRKSGVGNVFIKNLEDSIDNKALYDTFSTFGNILSCKVVCDDHGSRGFGFVHFETHEA 150
Query: 107 AAMAILSLNGRHLFGQPIKVNWAYASGQREDTSG-----HFNIFVGDLSPEVTDATLFAC 161
A AI ++NG L + + V + +RE G NI+V +L +V + L
Sbjct: 151 AQNAIRTMNGMLLNDRKVFVGHFKSRREREAELGARALEFTNIYVKNLHVDVDERCLQDL 210
Query: 162 FSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKG 221
FS + +VM D +G SRGFGFV+F +DAQ A+ D+ GK + R + A K
Sbjct: 211 FSQFGKILSVKVMRDD-SGHSRGFGFVNFEKHEDAQKAVTDMNGKEVSGRLLYVGRAQKR 269
Query: 222 AGN-NEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLH 280
NE K+ + LT Q +YV NL + L
Sbjct: 270 VERQNELKRRFEQMKQDRLTRY------------------QGVNLYVKNLDDSIDDEKLR 311
Query: 281 RHFHSLGAGVIEEVRVQ--RDKGFGFVRYSTHAEAALAIQMGN 321
+ F G +V + KGFGFV +S+ EA A+ N
Sbjct: 312 KEFAPYGMITSAKVMTEGGHSKGFGFVCFSSPEEATKAVTEMN 354
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 89/181 (49%), Gaps = 20/181 (11%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDK---SSYGFIHYFDRRSAAMAILSL 114
++YV N+H V E LQ++FS G + K++R D +GF+++ A A+ +
Sbjct: 192 NIYVKNLHVDVDERCLQDLFSQFGKILSVKVMRDDSGHSRGFGFVNFEKHEDAQKAVTDM 251
Query: 115 NGRHLFGQPIKVNWAYASGQREDTSGH---------------FNIFVGDLSPEVTDATLF 159
NG+ + G+ + V A +R++ N++V +L + D L
Sbjct: 252 NGKEVSGRLLYVGRAQKRVERQNELKRRFEQMKQDRLTRYQGVNLYVKNLDDSIDDEKLR 311
Query: 160 ACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT 219
F+ Y + A+VM + G S+GFGFV F + ++A A+ ++ G+ +G++ + A
Sbjct: 312 KEFAPYGMITSAKVMTE--GGHSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQ 369
Query: 220 K 220
+
Sbjct: 370 R 370
>gi|417403696|gb|JAA48646.1| Putative polyadenylate-binding protein rrm superfamily [Desmodus
rotundus]
Length = 660
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 77/281 (27%), Positives = 130/281 (46%), Gaps = 47/281 (16%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIR----KDKSSYGFIHYFDRRSAAMAILS 113
S+YVG++H+ VTE +L E FS GPV ++ R + Y ++++ A A+ +
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 114 LNGRHLFGQPIKVNWAYASGQREDT---SGHFNIFVGDLSPEVTDATLFACFSVYPSCSD 170
+N + G+PI++ W+ QR+ + SG N+F+ +L + + L+ FS + +
Sbjct: 72 MNFDVIKGKPIRIMWS----QRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 171 ARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQS 230
+V+ D+ S+G+ FV F Q+ A AI + G L R++ G + ++
Sbjct: 128 CKVVCDENG--SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFV-------GRFKSRKE 178
Query: 231 SDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGV 290
+A EL + E +T VY+ N E+ L F G +
Sbjct: 179 REA----ELGAKAKE----------------FTNVYIKNFGEEMDDESLKELFSQFGKTL 218
Query: 291 IEEVRVQRD-----KGFGFVRYSTHAEAALAIQMGNTTQSS 326
V+V RD KGFGFV Y H +A A++ N + S
Sbjct: 219 --SVKVMRDPNGKSKGFGFVSYEKHEDANKAVEEMNGKEIS 257
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 129/283 (45%), Gaps = 31/283 (10%)
Query: 52 DPSTCRS----VYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRR 105
DPS +S V++ N+ + L + FS+ G + CK++ + S Y F+H+ +
Sbjct: 90 DPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQE 149
Query: 106 SAAMAILSLNGRHLFGQPIKVNWAYASGQREDTSG-----HFNIFVGDLSPEVTDATLFA 160
+A AI +NG L + + V + +RE G N+++ + E+ D +L
Sbjct: 150 AADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEMDDESLKE 209
Query: 161 CFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATK 220
FS + +VM D G+S+GFGFVS+ +DA A+ ++ GK + + I A K
Sbjct: 210 LFSQFGKTLSVKVMRD-PNGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKVIFVGRAQK 268
Query: 221 GAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLH 280
++Q+ EL + +E + Q +Y+ NL + L
Sbjct: 269 KV----ERQA-------ELKRKFEQLKQERISRY------QGVNLYIKNLDDTIDDEKLR 311
Query: 281 RHFHSLGAGVIEEVRVQ--RDKGFGFVRYSTHAEAALAIQMGN 321
+ F G+ +V ++ R KGFGFV +S+ EA A+ N
Sbjct: 312 KEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMN 354
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 88/181 (48%), Gaps = 20/181 (11%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRK---DKSSYGFIHYFDRRSAAMAILSL 114
+VY+ N ++ + L+E+FS G K++R +GF+ Y A A+ +
Sbjct: 192 NVYIKNFGEEMDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKHEDANKAVEEM 251
Query: 115 NGRHLFGQPIKVNWAYASGQR-------------EDTSGH--FNIFVGDLSPEVTDATLF 159
NG+ + G+ I V A +R E S + N+++ +L + D L
Sbjct: 252 NGKEISGKVIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLR 311
Query: 160 ACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT 219
FS + S + A+VM + GRS+GFGFV F + ++A A+ ++ G+ +GS+ + A
Sbjct: 312 KEFSPFGSITSAKVMLED--GRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQ 369
Query: 220 K 220
+
Sbjct: 370 R 370
Score = 38.9 bits (89), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRRSAAMAILSLN 115
++Y+ N+ + + L++ FS G + K++ +D S +GF+ + A A+ +N
Sbjct: 295 NLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMN 354
Query: 116 GRHLFGQPIKVNWAYASGQRE 136
GR + +P+ V A +R+
Sbjct: 355 GRIVGSKPLYVALAQRKEERK 375
>gi|417403591|gb|JAA48595.1| Putative polyadenylate-binding protein rrm superfamily [Desmodus
rotundus]
Length = 644
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 77/281 (27%), Positives = 130/281 (46%), Gaps = 47/281 (16%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIR----KDKSSYGFIHYFDRRSAAMAILS 113
S+YVG++H+ VTE +L E FS GPV ++ R + Y ++++ A A+ +
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 114 LNGRHLFGQPIKVNWAYASGQREDT---SGHFNIFVGDLSPEVTDATLFACFSVYPSCSD 170
+N + G+PI++ W+ QR+ + SG N+F+ +L + + L+ FS + +
Sbjct: 72 MNFDVIKGKPIRIMWS----QRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 171 ARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQS 230
+V+ D+ S+G+ FV F Q+ A AI + G L R++ G + ++
Sbjct: 128 CKVVCDENG--SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFV-------GRFKSRKE 178
Query: 231 SDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGV 290
+A EL + E +T VY+ N E+ L F G +
Sbjct: 179 REA----ELGAKAKE----------------FTNVYIKNFGEEMDDESLKELFSQFGKTL 218
Query: 291 IEEVRVQRD-----KGFGFVRYSTHAEAALAIQMGNTTQSS 326
V+V RD KGFGFV Y H +A A++ N + S
Sbjct: 219 --SVKVMRDPNGKSKGFGFVSYEKHEDANKAVEEMNGKEIS 257
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 129/283 (45%), Gaps = 31/283 (10%)
Query: 52 DPSTCRS----VYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRR 105
DPS +S V++ N+ + L + FS+ G + CK++ + S Y F+H+ +
Sbjct: 90 DPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQE 149
Query: 106 SAAMAILSLNGRHLFGQPIKVNWAYASGQREDTSG-----HFNIFVGDLSPEVTDATLFA 160
+A AI +NG L + + V + +RE G N+++ + E+ D +L
Sbjct: 150 AADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEMDDESLKE 209
Query: 161 CFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATK 220
FS + +VM D G+S+GFGFVS+ +DA A+ ++ GK + + I A K
Sbjct: 210 LFSQFGKTLSVKVMRD-PNGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKVIFVGRAQK 268
Query: 221 GAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLH 280
++Q+ EL + +E + Q +Y+ NL + L
Sbjct: 269 KV----ERQA-------ELKRKFEQLKQERISRY------QGVNLYIKNLDDTIDDEKLR 311
Query: 281 RHFHSLGAGVIEEVRVQ--RDKGFGFVRYSTHAEAALAIQMGN 321
+ F G+ +V ++ R KGFGFV +S+ EA A+ N
Sbjct: 312 KEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMN 354
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 88/181 (48%), Gaps = 20/181 (11%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRK---DKSSYGFIHYFDRRSAAMAILSL 114
+VY+ N ++ + L+E+FS G K++R +GF+ Y A A+ +
Sbjct: 192 NVYIKNFGEEMDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKHEDANKAVEEM 251
Query: 115 NGRHLFGQPIKVNWAYASGQR-------------EDTSGH--FNIFVGDLSPEVTDATLF 159
NG+ + G+ I V A +R E S + N+++ +L + D L
Sbjct: 252 NGKEISGKVIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLR 311
Query: 160 ACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT 219
FS + S + A+VM + GRS+GFGFV F + ++A A+ ++ G+ +GS+ + A
Sbjct: 312 KEFSPFGSITSAKVMLED--GRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQ 369
Query: 220 K 220
+
Sbjct: 370 R 370
Score = 38.9 bits (89), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRRSAAMAILSLN 115
++Y+ N+ + + L++ FS G + K++ +D S +GF+ + A A+ +N
Sbjct: 295 NLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMN 354
Query: 116 GRHLFGQPIKVNWAYASGQRE 136
GR + +P+ V A +R+
Sbjct: 355 GRIVGSKPLYVALAQRKEERK 375
>gi|410899897|ref|XP_003963433.1| PREDICTED: embryonic polyadenylate-binding protein-like [Takifugu
rubripes]
Length = 606
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 78/284 (27%), Positives = 129/284 (45%), Gaps = 31/284 (10%)
Query: 49 PGFDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRRS 106
PG S ++++ N+ + L + FS+ G + CK++ ++ S YGF+H+ +
Sbjct: 91 PGLRKSGVGNIFIKNMDESIDNKALYDTFSAFGNILSCKVVCDERGSKGYGFVHFETEEA 150
Query: 107 AAMAILSLNGRHLFGQPIKVNWAYASGQREDTSG-----HFNIFVGDLSPEVTDATLFAC 161
A AI ++NG L + + V + +RE+ G NI++ + + D L
Sbjct: 151 ANRAIETMNGMLLNDRKVFVGHFKSRKEREEELGSKALKFTNIYIKNFGEDYNDEKLKEV 210
Query: 162 FSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKG 221
F+ + RVM D++ GRSRGFGFV+F + +DAQ A++++ GK L + I A K
Sbjct: 211 FAAFGRTLSVRVMKDER-GRSRGFGFVNFAHHEDAQKAVDEMNGKELNGKVIYVGRAQKR 269
Query: 222 AGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHR 281
++ + K EL + N +YV NL + L +
Sbjct: 270 L-----ERQGELKRKFELIKQDRIQRYQGVN------------LYVKNLDDSIDDERLRK 312
Query: 282 HFHSLGAGVIEEVRVQRD----KGFGFVRYSTHAEAALAIQMGN 321
F G I +V D +GFGFV +S+ EA A+ N
Sbjct: 313 EFAPY--GTITSAKVMTDGPQSRGFGFVCFSSPEEATKAVTEMN 354
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 68/274 (24%), Positives = 127/274 (46%), Gaps = 43/274 (15%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIR----KDKSSYGFIHYFDRRSAAMAILS 113
S+YVG++H VTE +L + FS GP+ ++ R + Y +I++ A A+ +
Sbjct: 12 SLYVGDLHPDVTEAMLYQKFSPAGPIMSIRVCRDIITRRSLGYAYINFQQPADAECALDT 71
Query: 114 LNGRHLFGQPIKVNWAYAS-GQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDAR 172
+N + G+PI++ W+ G R+ SG NIF+ ++ + + L+ FS + + +
Sbjct: 72 MNYDVIKGRPIRIMWSQRDPGLRK--SGVGNIFIKNMDESIDNKALYDTFSAFGNILSCK 129
Query: 173 VMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSSD 232
V+ D++ S+G+GFV F ++ A AI + G L R++ + E ++
Sbjct: 130 VVCDERG--SKGYGFVHFETEEAANRAIETMNGMLLNDRKV---FVGHFKSRKEREEELG 184
Query: 233 AKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIE 292
+K++ ++T +Y+ N + L F + G +
Sbjct: 185 SKAL------------------------KFTNIYIKNFGEDYNDEKLKEVFAAFGRTL-- 218
Query: 293 EVRVQRD-----KGFGFVRYSTHAEAALAIQMGN 321
VRV +D +GFGFV ++ H +A A+ N
Sbjct: 219 SVRVMKDERGRSRGFGFVNFAHHEDAQKAVDEMN 252
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 88/181 (48%), Gaps = 20/181 (11%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS---YGFIHYFDRRSAAMAILSL 114
++Y+ N + L+EVF++ G ++++ ++ +GF+++ A A+ +
Sbjct: 192 NIYIKNFGEDYNDEKLKEVFAAFGRTLSVRVMKDERGRSRGFGFVNFAHHEDAQKAVDEM 251
Query: 115 NGRHLFGQPIKVNWAYASGQRE-DTSGHF--------------NIFVGDLSPEVTDATLF 159
NG+ L G+ I V A +R+ + F N++V +L + D L
Sbjct: 252 NGKELNGKVIYVGRAQKRLERQGELKRKFELIKQDRIQRYQGVNLYVKNLDDSIDDERLR 311
Query: 160 ACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT 219
F+ Y + + A+VM D +SRGFGFV F + ++A A+ ++ G+ + ++ + A
Sbjct: 312 KEFAPYGTITSAKVMTDGP--QSRGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQ 369
Query: 220 K 220
+
Sbjct: 370 R 370
>gi|380793569|gb|AFE68660.1| polyadenylate-binding protein 4 isoform 3, partial [Macaca mulatta]
Length = 485
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 130/281 (46%), Gaps = 47/281 (16%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIR----KDKSSYGFIHYFDRRSAAMAILS 113
S+YVG++H+ VTE +L E FS GPV ++ R + Y ++++ A A+ +
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 114 LNGRHLFGQPIKVNWAYASGQREDT---SGHFNIFVGDLSPEVTDATLFACFSVYPSCSD 170
+N + G+PI++ W+ QR+ + SG N+F+ +L + + L+ FS + +
Sbjct: 72 MNFDVIKGKPIRIMWS----QRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 171 ARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQS 230
+V+ D+ S+G+ FV F Q+ A AI + G L R++ G + ++
Sbjct: 128 CKVVCDENG--SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFV-------GRFKSRKE 178
Query: 231 SDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGV 290
+A EL + E +T VY+ N EV L F G +
Sbjct: 179 REA----ELGAKAKE----------------FTNVYIKNFGEEVDDESLKELFSQFGKTL 218
Query: 291 IEEVRVQRD-----KGFGFVRYSTHAEAALAIQMGNTTQSS 326
V+V RD KGFGFV Y H +A A++ N + S
Sbjct: 219 --SVKVMRDPSGKSKGFGFVSYEKHEDANKAVEEMNGKEIS 257
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 129/285 (45%), Gaps = 35/285 (12%)
Query: 52 DPSTCRS----VYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRR 105
DPS +S V++ N+ + L + FS+ G + CK++ + S Y F+H+ +
Sbjct: 90 DPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQE 149
Query: 106 SAAMAILSLNGRHLFGQPIKVNWAYASGQREDTSG-----HFNIFVGDLSPEVTDATLFA 160
+A AI +NG L + + V + +RE G N+++ + EV D +L
Sbjct: 150 AADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKE 209
Query: 161 CFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATK 220
FS + +VM D +G+S+GFGFVS+ +DA A+ ++ GK + + I A K
Sbjct: 210 LFSQFGKTLSVKVMRD-PSGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRAQK 268
Query: 221 GAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQY--TTVYVGNLAPEVTQLD 278
++Q+ + +L E +Y +Y+ NL +
Sbjct: 269 KV----ERQAELKRKFEQLKQ---------------ERISRYQGVNLYIKNLDDTIDDEK 309
Query: 279 LHRHFHSLGAGVIEEVRVQ--RDKGFGFVRYSTHAEAALAIQMGN 321
L + F G+ +V ++ R KGFGFV +S+ EA A+ N
Sbjct: 310 LRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMN 354
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 88/181 (48%), Gaps = 20/181 (11%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRK---DKSSYGFIHYFDRRSAAMAILSL 114
+VY+ N +V + L+E+FS G K++R +GF+ Y A A+ +
Sbjct: 192 NVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGKSKGFGFVSYEKHEDANKAVEEM 251
Query: 115 NGRHLFGQPIKVNWAYASGQR-------------EDTSGH--FNIFVGDLSPEVTDATLF 159
NG+ + G+ I V A +R E S + N+++ +L + D L
Sbjct: 252 NGKEISGKIIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLR 311
Query: 160 ACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT 219
FS + S + A+VM + GRS+GFGFV F + ++A A+ ++ G+ +GS+ + A
Sbjct: 312 KEFSPFGSITSAKVMLED--GRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQ 369
Query: 220 K 220
+
Sbjct: 370 R 370
Score = 38.5 bits (88), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRRSAAMAILSLN 115
++Y+ N+ + + L++ FS G + K++ +D S +GF+ + A A+ +N
Sbjct: 295 NLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMN 354
Query: 116 GRHLFGQPIKVNWAYASGQRE 136
GR + +P+ V A +R+
Sbjct: 355 GRIVGSKPLYVALAQRKEERK 375
>gi|41053728|ref|NP_957176.1| poly A binding protein, cytoplasmic 1 b [Danio rerio]
gi|37590406|gb|AAH59662.1| Poly A binding protein, cytoplasmic 1 b [Danio rerio]
gi|39645430|gb|AAH63948.1| Poly A binding protein, cytoplasmic 1 b [Danio rerio]
Length = 634
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 79/279 (28%), Positives = 129/279 (46%), Gaps = 31/279 (11%)
Query: 52 DPSTCRS----VYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRR 105
DPS +S +++ N+ + L + FS+ G + CK++ + S YGF+H+ +
Sbjct: 90 DPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQE 149
Query: 106 SAAMAILSLNGRHLFGQPIKVNWAYASGQREDTSG-----HFNIFVGDLSPEVTDATLFA 160
+A AI +NG L + + V + +RE G N+++ + ++ D L
Sbjct: 150 AAERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDDKLKD 209
Query: 161 CFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATK 220
FS Y + RVM D+ G+SRGFGFVSF +DAQ A++++ GK + + I A K
Sbjct: 210 IFSKYGNAMSIRVMTDE-NGKSRGFGFVSFERHEDAQRAVDEMNGKEMNGKLIYVGRAQK 268
Query: 221 GAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLH 280
++Q+ + E K+ T Q +YV NL + L
Sbjct: 269 KV----ERQTELKRKF--------EQMKQDRMTRY-----QGVNLYVKNLDDGIDDERLR 311
Query: 281 RHFHSLGAGVIEEVRVQ--RDKGFGFVRYSTHAEAALAI 317
+ F G +V + R KGFGFV +S+ EA A+
Sbjct: 312 KEFSPFGTITSAKVMMDGGRSKGFGFVCFSSPEEATKAV 350
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 126/276 (45%), Gaps = 47/276 (17%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIR----KDKSSYGFIHYFDRRSAAMAILS 113
S+YVG++H VTE +L E FS G + ++ R + Y ++++ A A+ +
Sbjct: 12 SLYVGDLHQDVTEAMLYEKFSPAGAILSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 114 LNGRHLFGQPIKVNWAYASGQREDT---SGHFNIFVGDLSPEVTDATLFACFSVYPSCSD 170
+N + G+P+++ W+ QR+ + SG NIF+ +L + + L+ FS + +
Sbjct: 72 MNFDVIKGRPVRIMWS----QRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 171 ARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQS 230
+V+ D+ S+G+GFV F Q+ A+ AI + G L R++ G + ++
Sbjct: 128 CKVVCDENG--SKGYGFVHFETQEAAERAIEKMNGMLLNDRKV-------FVGRFKSRKE 178
Query: 231 SDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGV 290
+A EL + E +T VY+ N ++ L F G +
Sbjct: 179 REA----ELGARAKE----------------FTNVYIKNFGEDMDDDKLKDIFSKYGNAM 218
Query: 291 IEEVRVQRD-----KGFGFVRYSTHAEAALAIQMGN 321
+RV D +GFGFV + H +A A+ N
Sbjct: 219 --SIRVMTDENGKSRGFGFVSFERHEDAQRAVDEMN 252
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 86/181 (47%), Gaps = 20/181 (11%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS---YGFIHYFDRRSAAMAILSL 114
+VY+ N + + L+++FS G +++ + +GF+ + A A+ +
Sbjct: 192 NVYIKNFGEDMDDDKLKDIFSKYGNAMSIRVMTDENGKSRGFGFVSFERHEDAQRAVDEM 251
Query: 115 NGRHLFGQPIKVNWAYASGQRE------------DTSGHF---NIFVGDLSPEVTDATLF 159
NG+ + G+ I V A +R+ D + N++V +L + D L
Sbjct: 252 NGKEMNGKLIYVGRAQKKVERQTELKRKFEQMKQDRMTRYQGVNLYVKNLDDGIDDERLR 311
Query: 160 ACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT 219
FS + + + A+VM D GRS+GFGFV F + ++A A+ ++ G+ + ++ + A
Sbjct: 312 KEFSPFGTITSAKVMMD--GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQ 369
Query: 220 K 220
+
Sbjct: 370 R 370
>gi|222623094|gb|EEE57226.1| hypothetical protein OsJ_07197 [Oryza sativa Japonica Group]
Length = 459
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 85/277 (30%), Positives = 132/277 (47%), Gaps = 27/277 (9%)
Query: 81 GPVEGCKLIRKDKSS----YGFIHYFDRRSAAMAILSLNGRHL--FGQPIKVNWA-YASG 133
G V K+IR S YGF+ +F SA A+ + +G + + K+NWA Y+ G
Sbjct: 139 GKVVTIKVIRNRHSGVSEGYGFVEFFSHASAEKALQNFSGHVMPNTDRAFKLNWASYSMG 198
Query: 134 Q-REDTSGHFNIFVGDLSPEVTDATLFACFSV-YPSCSDARVMWDQKTGRSRGFGFVSFR 191
+ R + + +IFVGDL+ +VTD L F+ Y S A+V+ D TGRSRG+GFV F
Sbjct: 199 EKRAELASDHSIFVGDLAVDVTDEMLMDLFAKKYRSVKGAKVIIDANTGRSRGYGFVRFG 258
Query: 192 NQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETT 251
+ D A+ ++ G + +R IR AT D Q + A + + + E
Sbjct: 259 DDNDKTHAMTEMNGAYCSTRPIRIGPATP-----RDLQPTSASAYGLVAKARANIWGEYV 313
Query: 252 NTEA------PENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFV 305
+++ T+YVG L P T+ +L + F G + V++ K GFV
Sbjct: 314 GDSGSSPPRQSDSDSTNRTIYVGGLDPNATEDELRKAFAKYGD--LASVKIPVGKQCGFV 371
Query: 306 RYSTHAEAALAIQMGNTTQSSYLFGKQ-MKCSWGSKP 341
++ +A A+Q N + GKQ ++ SWG P
Sbjct: 372 QFVNRPDAEEALQGLNGS----TIGKQAVRLSWGRSP 404
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 83/198 (41%), Gaps = 44/198 (22%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSST-GPVEGCKLIRKDKS----SYGFIHYFDRRSAAMAIL 112
S++VG++ VT+ +L ++F+ V+G K+I + YGF+ + D A+
Sbjct: 209 SIFVGDLAVDVTDEMLMDLFAKKYRSVKGAKVIIDANTGRSRGYGFVRFGDDNDKTHAMT 268
Query: 113 SLNGRHLFGQPIKVN-------------------------WAYASG--------QREDTS 139
+NG + +PI++ W G Q + S
Sbjct: 269 EMNGAYCSTRPIRIGPATPRDLQPTSASAYGLVAKARANIWGEYVGDSGSSPPRQSDSDS 328
Query: 140 GHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSA 199
+ I+VG L P T+ L F+ Y + ++ ++ GFV F N+ DA+ A
Sbjct: 329 TNRTIYVGGLDPNATEDELRKAFAKYGDLASVKIPVGKQC------GFVQFVNRPDAEEA 382
Query: 200 INDLTGKWLGSRQIRCNW 217
+ L G +G + +R +W
Sbjct: 383 LQGLNGSTIGKQAVRLSW 400
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 51/102 (50%), Gaps = 6/102 (5%)
Query: 44 SGNLPP--GFDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSSYGFIHY 101
SG+ PP ST R++YVG + TE L++ F+ G + K+ + GF+ +
Sbjct: 316 SGSSPPRQSDSDSTNRTIYVGGLDPNATEDELRKAFAKYGDLASVKIPVGKQC--GFVQF 373
Query: 102 FDRRSAAMAILSLNGRHLFGQPIKVNWAY--ASGQREDTSGH 141
+R A A+ LNG + Q ++++W AS Q SGH
Sbjct: 374 VNRPDAEEALQGLNGSTIGKQAVRLSWGRSPASKQSRGDSGH 415
>gi|344279674|ref|XP_003411612.1| PREDICTED: polyadenylate-binding protein 1 [Loxodonta africana]
Length = 612
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 82/293 (27%), Positives = 136/293 (46%), Gaps = 46/293 (15%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIR----KDKSSYGFIHYFDRRSAAMAILS 113
S+YVG++H VTE +L E F GP+ ++ R + Y +I++ A A+ +
Sbjct: 12 SLYVGDLHADVTEAMLYEKFLPAGPILSIRVCRDVATRRSLRYAYINFQQPADAERALDT 71
Query: 114 LNGRHLFGQPIKVNWAYAS-GQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDAR 172
+N + GQPI++ W+ G R+ SG NIF+ +L + + L+ FS + + +
Sbjct: 72 MNFEVIKGQPIRIMWSQRDPGLRK--SGVGNIFIKNLEDSIDNKALYDTFSTFGNILSCK 129
Query: 173 VMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSSD 232
V+ D+ SRGFGFV F + AQ AI+ + G L R++ G+ + ++ +
Sbjct: 130 VVCDEHG--SRGFGFVHFETHEAAQQAISTMNGMLLNDRKV-------FVGHFKSRRERE 180
Query: 233 AKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIE 292
A EL + E +T +YV NL ++ + L F G +
Sbjct: 181 A----ELRARAME----------------FTNIYVKNLQVDMDEQGLQDLFSQFGK--LL 218
Query: 293 EVRVQRD-----KGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSK 340
V+V +D +GFGFV + H EA A+ N + S G+Q+ K
Sbjct: 219 SVKVMKDNNGHSRGFGFVNFEKHEEAQKAVMDMNGKEVS---GRQLYVGRAQK 268
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/285 (27%), Positives = 125/285 (43%), Gaps = 33/285 (11%)
Query: 49 PGFDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRRS 106
PG S ++++ N+ + L + FS+ G + CK++ + S +GF+H+ +
Sbjct: 91 PGLRKSGVGNIFIKNLEDSIDNKALYDTFSTFGNILSCKVVCDEHGSRGFGFVHFETHEA 150
Query: 107 AAMAILSLNGRHLFGQPIKVNWAYASGQRE-----DTSGHFNIFVGDLSPEVTDATLFAC 161
A AI ++NG L + + V + +RE NI+V +L ++ + L
Sbjct: 151 AQQAISTMNGMLLNDRKVFVGHFKSRREREAELRARAMEFTNIYVKNLQVDMDEQGLQDL 210
Query: 162 FSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKG 221
FS + +VM D G SRGFGFV+F ++AQ A+ D+ GK + RQ+ A K
Sbjct: 211 FSQFGKLLSVKVMKD-NNGHSRGFGFVNFEKHEEAQKAVMDMNGKEVSGRQLYVGRAQKR 269
Query: 222 AGN-NEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLH 280
NE K+ + L N Q +YV NL + L
Sbjct: 270 VERQNELKRKFEQMKQDRL------------------NRYQGVNLYVKNLDDSIDDEKLR 311
Query: 281 RHFHSLGAGVIEEVRVQRD----KGFGFVRYSTHAEAALAIQMGN 321
+ F GVI +V + KGFGFV +S+ EA A+ N
Sbjct: 312 KEFSPY--GVITSAKVMTEGGHSKGFGFVCFSSPEEATKAVTEMN 354
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 89/181 (49%), Gaps = 20/181 (11%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDK---SSYGFIHYFDRRSAAMAILSL 114
++YV N+ + E LQ++FS G + K+++ + +GF+++ A A++ +
Sbjct: 192 NIYVKNLQVDMDEQGLQDLFSQFGKLLSVKVMKDNNGHSRGFGFVNFEKHEEAQKAVMDM 251
Query: 115 NGRHLFGQPIKVNWAYASGQREDTSGH---------------FNIFVGDLSPEVTDATLF 159
NG+ + G+ + V A +R++ N++V +L + D L
Sbjct: 252 NGKEVSGRQLYVGRAQKRVERQNELKRKFEQMKQDRLNRYQGVNLYVKNLDDSIDDEKLR 311
Query: 160 ACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT 219
FS Y + A+VM + G S+GFGFV F + ++A A+ ++ G+ +G++ + A
Sbjct: 312 KEFSPYGVITSAKVMTE--GGHSKGFGFVCFSSPEEATKAVTEMNGRIIGTKPLYVALAQ 369
Query: 220 K 220
+
Sbjct: 370 R 370
>gi|45360881|ref|NP_989116.1| splicing factor 3b, subunit 4, 49kDa [Xenopus (Silurana)
tropicalis]
gi|38512254|gb|AAH61357.1| splicing factor 3b, subunit 4, 49kDa [Xenopus (Silurana)
tropicalis]
gi|89268695|emb|CAJ83013.1| splicing factor 3b, subunit 4, 49kDa [Xenopus (Silurana)
tropicalis]
Length = 388
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 63/194 (32%), Positives = 104/194 (53%), Gaps = 10/194 (5%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS-----YGFIHYFDRRSAAMAIL 112
+VYVG + +V+EPLL E+F GPV + KD+ + YGF+ + A AI
Sbjct: 14 TVYVGGLDEKVSEPLLWELFLQAGPVVNTHM-PKDRVTGQHQGYGFVEFLSEEDADYAIK 72
Query: 113 SLNGRHLFGQPIKVNWAYASGQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSC-SDA 171
+N L+G+PI+VN A A + D NIF+G+L PE+ + L+ FS +
Sbjct: 73 IMNMIKLYGKPIRVNKASAHNKNLDVGA--NIFIGNLDPEIDEKLLYDTFSAFGVILQTP 130
Query: 172 RVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSS 231
++M D TG S+G+ F++F + + +AI + G++L +R I ++A K E + S
Sbjct: 131 KIMRDPDTGNSKGYAFINFASFDASDAAIEAMNGQYLCNRPITVSYAFKKDSKGE-RHGS 189
Query: 232 DAKSVVELTNGSSE 245
A+ ++ N S+
Sbjct: 190 AAERLLAAQNPLSQ 203
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/216 (22%), Positives = 96/216 (44%), Gaps = 44/216 (20%)
Query: 131 ASGQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSF 190
A+G + + ++VG L +V++ L+ F + + D+ TG+ +G+GFV F
Sbjct: 2 AAGPISERNQDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEF 61
Query: 191 RNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKET 250
+++DA AI + L + IR N K + +N++ L G++
Sbjct: 62 LSEEDADYAIKIMNMIKLYGKPIRVN---KASAHNKN-----------LDVGAN------ 101
Query: 251 TNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRD------KGFGF 304
+++GNL PE+ + L+ F + G +++ ++ RD KG+ F
Sbjct: 102 --------------IFIGNLDPEIDEKLLYDTFSAFGV-ILQTPKIMRDPDTGNSKGYAF 146
Query: 305 VRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSK 340
+ +++ + AI+ N YL + + S+ K
Sbjct: 147 INFASFDASDAAIEAMN---GQYLCNRPITVSYAFK 179
>gi|75948207|gb|AAI05267.1| SF3B4 protein [Bos taurus]
Length = 418
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 63/194 (32%), Positives = 104/194 (53%), Gaps = 10/194 (5%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS-----YGFIHYFDRRSAAMAIL 112
+VYVG + +V+EPLL E+F GPV + KD+ + YGF+ + A AI
Sbjct: 8 TVYVGGLDEKVSEPLLWELFLQAGPVVNTHM-PKDRVTGQHQGYGFVEFLSEEDADYAIK 66
Query: 113 SLNGRHLFGQPIKVNWAYASGQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSC-SDA 171
+N L+G+PI+VN A A + D NIF+G+L PE+ + L+ FS +
Sbjct: 67 IMNMIKLYGKPIRVNKASAHNKNLDVGA--NIFIGNLDPEIDEKLLYDTFSAFGVILQTP 124
Query: 172 RVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSS 231
++M D TG S+G+ F++F + + +AI + G++L +R I ++A K E + S
Sbjct: 125 KIMRDPDTGNSKGYAFINFASFDASDAAIEAMNGQYLCNRPITVSYAFKKDSKGE-RHGS 183
Query: 232 DAKSVVELTNGSSE 245
A+ ++ N S+
Sbjct: 184 AAERLLAAQNPLSQ 197
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 45/203 (22%), Positives = 86/203 (42%), Gaps = 44/203 (21%)
Query: 144 IFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDL 203
++VG L +V++ L+ F + + D+ TG+ +G+GFV F +++DA AI +
Sbjct: 9 VYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYAIKIM 68
Query: 204 TGKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYT 263
L + IR N A+ N + N
Sbjct: 69 NMIKLYGKPIRVNKASA----------------------------HNKNLDVGAN----- 95
Query: 264 TVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRD------KGFGFVRYSTHAEAALAI 317
+++GNL PE+ + L+ F + G +++ ++ RD KG+ F+ +++ + AI
Sbjct: 96 -IFIGNLDPEIDEKLLYDTFSAFGV-ILQTPKIMRDPDTGNSKGYAFINFASFDASDAAI 153
Query: 318 QMGNTTQSSYLFGKQMKCSWGSK 340
+ N YL + + S+ K
Sbjct: 154 EAMN---GQYLCNRPITVSYAFK 173
>gi|119596295|gb|EAW75889.1| hCG2019100, isoform CRA_c [Homo sapiens]
Length = 433
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 81/279 (29%), Positives = 128/279 (45%), Gaps = 43/279 (15%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIR----KDKSSYGFIHYFDRRSAAMAILS 113
S+YVG++H VTE +L E FS GP+ ++ R + Y +I++ A A+ +
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADAERALDT 71
Query: 114 LNGRHLFGQPIKVNWAYAS-GQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDAR 172
+N L GQPI++ W+ G R+ SG NIF+ +L + + L+ FS + + +
Sbjct: 72 MNFEMLKGQPIRIMWSQRDPGLRK--SGVGNIFIKNLEDSIDNKALYDTFSTFGNILSCK 129
Query: 173 VMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSSD 232
V D+ SRGFGFV F + AQ AIN + G L R++ G+ + ++ +
Sbjct: 130 VACDEHG--SRGFGFVHFETHEAAQQAINTMNGMLLNDRKV-------FVGHFKSRRERE 180
Query: 233 AKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIE 292
A E ++T +YV NL +V + L F G +
Sbjct: 181 A--------------------ELGARALEFTNIYVKNLPVDVDEQGLQDLFSQFGKML-- 218
Query: 293 EVRVQRD-----KGFGFVRYSTHAEAALAIQMGNTTQSS 326
V+V RD + FGFV + H EA A+ N + S
Sbjct: 219 SVKVMRDNSGHSRCFGFVNFEKHEEAQKAVVHMNGKEVS 257
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 121/281 (43%), Gaps = 33/281 (11%)
Query: 49 PGFDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRRS 106
PG S ++++ N+ + L + FS+ G + CK+ + S +GF+H+ +
Sbjct: 91 PGLRKSGVGNIFIKNLEDSIDNKALYDTFSTFGNILSCKVACDEHGSRGFGFVHFETHEA 150
Query: 107 AAMAILSLNGRHLFGQPIKVNWAYASGQREDTSG-----HFNIFVGDLSPEVTDATLFAC 161
A AI ++NG L + + V + +RE G NI+V +L +V + L
Sbjct: 151 AQQAINTMNGMLLNDRKVFVGHFKSRREREAELGARALEFTNIYVKNLPVDVDEQGLQDL 210
Query: 162 FSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKG 221
FS + +VM D +G SR FGFV+F ++AQ A+ + GK + R + A K
Sbjct: 211 FSQFGKMLSVKVMRDN-SGHSRCFGFVNFEKHEEAQKAVVHMNGKEVSGRLLYAGRAQKR 269
Query: 222 AGN-NEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLH 280
NE K+ + L Q +YV NL + L
Sbjct: 270 VERQNELKRRFEQMKQDRL------------------RRYQGVNLYVKNLDDSIDDDKLR 311
Query: 281 RHFHSLGAGVIEEVRVQRD----KGFGFVRYSTHAEAALAI 317
+ F GVI +V + KGFGFV +S+ EA A+
Sbjct: 312 KEFSPY--GVITSAKVMTEGGHSKGFGFVCFSSPEEATKAV 350
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 88/181 (48%), Gaps = 20/181 (11%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDK---SSYGFIHYFDRRSAAMAILSL 114
++YV N+ V E LQ++FS G + K++R + +GF+++ A A++ +
Sbjct: 192 NIYVKNLPVDVDEQGLQDLFSQFGKMLSVKVMRDNSGHSRCFGFVNFEKHEEAQKAVVHM 251
Query: 115 NGRHLFGQPIKVNWAYASGQREDTSGH---------------FNIFVGDLSPEVTDATLF 159
NG+ + G+ + A +R++ N++V +L + D L
Sbjct: 252 NGKEVSGRLLYAGRAQKRVERQNELKRRFEQMKQDRLRRYQGVNLYVKNLDDSIDDDKLR 311
Query: 160 ACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT 219
FS Y + A+VM + G S+GFGFV F + ++A A+ ++ G+ +G++ + A
Sbjct: 312 KEFSPYGVITSAKVMTE--GGHSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQ 369
Query: 220 K 220
+
Sbjct: 370 R 370
>gi|432881580|ref|XP_004073850.1| PREDICTED: polyadenylate-binding protein 1-like [Oryzias latipes]
Length = 631
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 78/279 (27%), Positives = 130/279 (46%), Gaps = 31/279 (11%)
Query: 52 DPSTCRS----VYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRR 105
DPS +S +++ N+ + L + FS+ G + CK++ + S YGF+H+
Sbjct: 90 DPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSRGYGFVHFETHD 149
Query: 106 SAAMAILSLNGRHLFGQPIKVNWAYASGQREDTSG-----HFNIFVGDLSPEVTDATLFA 160
+A AI +NG L + + V + +RE G N+++ + ++ D L
Sbjct: 150 AAERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAREFTNVYIKNFGEDMDDEKLKE 209
Query: 161 CFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATK 220
FS + + + RVM D+ +G RGFGFVSF N +DAQ A++++ GK L R + A K
Sbjct: 210 IFSKFGNATSVRVMTDE-SGGGRGFGFVSFENHEDAQKAVDEMNGKELNGRIMFVGRAQK 268
Query: 221 GAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLH 280
+ +EL + ++ T Q +YV NL + L
Sbjct: 269 -----------KMERQMELKRRFEQMKQDRTTRY------QGVNLYVKNLDDGIDDERLR 311
Query: 281 RHFHSLGAGVIEEVRVQ--RDKGFGFVRYSTHAEAALAI 317
+ F G+ +V ++ R KGFGFV +S+ EA A+
Sbjct: 312 KEFSPFGSITSAKVMMEGGRSKGFGFVCFSSPEEATKAV 350
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 125/285 (43%), Gaps = 47/285 (16%)
Query: 49 PGFDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIR----KDKSSYGFIHYFDR 104
PG S+YVG++H VTE +L E FS G + ++ R + Y ++++
Sbjct: 3 PGAPSYPIASLYVGDLHQDVTEAMLYEKFSPAGAIVSIRVCRDMITRRSLGYAYVNFQQP 62
Query: 105 RSAAMAILSLNGRHLFGQPIKVNWAYASGQREDT---SGHFNIFVGDLSPEVTDATLFAC 161
A A+ ++N + GQP+++ W+ QR+ + SG NIF+ +L + + L+
Sbjct: 63 ADAERALDTMNFDVIKGQPVRIMWS----QRDPSLRKSGVGNIFIKNLDKSIDNKALYDT 118
Query: 162 FSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKG 221
FS + + +V+ D+ SRG+GFV F A+ AI + G L R++
Sbjct: 119 FSAFGNILSCKVVCDENG--SRGYGFVHFETHDAAERAIEKMNGMLLNDRKVFV------ 170
Query: 222 AGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHR 281
G + ++ +A EL + E +T VY+ N ++ L
Sbjct: 171 -GRFKSRKEREA----ELGARARE----------------FTNVYIKNFGEDMDDEKLKE 209
Query: 282 HFHSLGAGVIEEVRVQRD-----KGFGFVRYSTHAEAALAIQMGN 321
F G VRV D +GFGFV + H +A A+ N
Sbjct: 210 IFSKFGNAT--SVRVMTDESGGGRGFGFVSFENHEDAQKAVDEMN 252
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 88/181 (48%), Gaps = 20/181 (11%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDK---SSYGFIHYFDRRSAAMAILSL 114
+VY+ N + + L+E+FS G +++ + +GF+ + + A A+ +
Sbjct: 192 NVYIKNFGEDMDDEKLKEIFSKFGNATSVRVMTDESGGGRGFGFVSFENHEDAQKAVDEM 251
Query: 115 NGRHLFGQPIKVNWAYASGQRE------------DTSGHF---NIFVGDLSPEVTDATLF 159
NG+ L G+ + V A +R+ D + + N++V +L + D L
Sbjct: 252 NGKELNGRIMFVGRAQKKMERQMELKRRFEQMKQDRTTRYQGVNLYVKNLDDGIDDERLR 311
Query: 160 ACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT 219
FS + S + A+VM + GRS+GFGFV F + ++A A+ ++ G+ + ++ + A
Sbjct: 312 KEFSPFGSITSAKVMME--GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQ 369
Query: 220 K 220
+
Sbjct: 370 R 370
>gi|357120111|ref|XP_003561773.1| PREDICTED: polyadenylate-binding protein-like [Brachypodium
distachyon]
Length = 714
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 81/280 (28%), Positives = 135/280 (48%), Gaps = 34/280 (12%)
Query: 52 DPSTCRS----VYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS---YGFIHYFDR 104
DP RS V+V N++ + +LQE+FS G + CK+ R D + YGF+ + +
Sbjct: 181 DPDARRSGVGNVFVKNLNDHIDNVILQELFSKFGDILSCKVARNDDGTSRGYGFVQFAAQ 240
Query: 105 RSAAMAILSLNGRHLFGQPIKVNWAYASGQR--EDTSGHFNIFVGDLSPEVTDATLFACF 162
SA +AI +LN H G+ + V +R + + N+++ +L ++T+ + F
Sbjct: 241 ESADIAIENLNNSHFEGRQLHVAHFIKKSERSANNDDKYTNLYMKNLDDDMTEELIKLKF 300
Query: 163 SVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGA 222
S + ++M + G S+GFGFVSF++ A+ A + G LGS+ + A K A
Sbjct: 301 SQFGPLISVKIM-KRDDGTSKGFGFVSFKSPDSAKKAKEAMNGIPLGSKSLYVARAQKKA 359
Query: 223 GNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRH 282
+ K ++L + E+ + T++ +N VY+ N++ V L
Sbjct: 360 ---------ERKQYLQLLH---EEKRNEILTKSNGSN-----VYIKNISDRVDDETLRER 402
Query: 283 FHSLGAGVIEEVRVQRD-----KGFGFVRYSTHAEAALAI 317
F G I V++ RD KGFGFV Y+T EA A+
Sbjct: 403 FDEFGN--ITSVKIMRDDKGISKGFGFVCYNTPDEAKCAV 440
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 121/283 (42%), Gaps = 55/283 (19%)
Query: 54 STCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS----YGFIHYFDRRSAAM 109
+T ++YVG++H E L + FS G V ++ R +S YG+++YF + A
Sbjct: 99 ATVPALYVGDLHEDAQEEHLFDAFSKVGAVTSVRVCRDTATSSSLRYGYVNYFSQADAMT 158
Query: 110 AILSLNGRHLFGQPIKVNWAYASGQREDT--SGHFNIFVGDLSPEVTDAT---LFACFSV 164
A+ +N + +PI+V W S + D SG N+FV +L+ + + LF+ F
Sbjct: 159 ALEKMNHSLILDKPIRVMW---SNRDPDARRSGVGNVFVKNLNDHIDNVILQELFSKFGD 215
Query: 165 YPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKG--- 221
SC AR G SRG+GFV F Q+ A AI +L RQ+ K
Sbjct: 216 ILSCKVAR----NDDGTSRGYGFVQFAAQESADIAIENLNNSHFEGRQLHVAHFIKKSER 271
Query: 222 AGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHR 281
+ NN+DK YT +Y+ NL ++T+ +
Sbjct: 272 SANNDDK---------------------------------YTNLYMKNLDDDMTEELIKL 298
Query: 282 HFHSLGAGVIEEVRVQRD---KGFGFVRYSTHAEAALAIQMGN 321
F G + ++ + D KGFGFV + + A A + N
Sbjct: 299 KFSQFGPLISVKIMKRDDGTSKGFGFVSFKSPDSAKKAKEAMN 341
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 94/200 (47%), Gaps = 23/200 (11%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS---YGFIHYFDRRSAAMAILSL 114
++Y+ N+ +TE L++ FS GP+ K++++D + +GF+ + SA A ++
Sbjct: 281 NLYMKNLDDDMTEELIKLKFSQFGPLISVKIMKRDDGTSKGFGFVSFKSPDSAKKAKEAM 340
Query: 115 NGRHLFGQPIKVNWAYASGQRED---------------TSGHFNIFVGDLSPEVTDATLF 159
NG L + + V A +R+ S N+++ ++S V D TL
Sbjct: 341 NGIPLGSKSLYVARAQKKAERKQYLQLLHEEKRNEILTKSNGSNVYIKNISDRVDDETLR 400
Query: 160 ACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT 219
F + + + ++M D K G S+GFGFV + +A+ A++ + G + + A
Sbjct: 401 ERFDEFGNITSVKIMRDDK-GISKGFGFVCYNTPDEAKCAVSSMRGVMFYDKPLYVAIAQ 459
Query: 220 KGAGNNEDKQSSDAKSVVEL 239
+ ED+++ + EL
Sbjct: 460 R----KEDRKARLEQRFAEL 475
>gi|291227649|ref|XP_002733794.1| PREDICTED: polyadenylate-binding protein 1-like [Saccoglossus
kowalevskii]
Length = 655
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 77/279 (27%), Positives = 126/279 (45%), Gaps = 30/279 (10%)
Query: 52 DPSTCRS----VYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRR 105
DPS +S V++ N+ + + + FS+ G + CK++ + S YGF+H+
Sbjct: 90 DPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGDILSCKVVCDENGSKGYGFVHFATEE 149
Query: 106 SAAMAILSLNGRHLFGQPIKVNWAYASGQREDTSG-----HFNIFVGDLSPEVTDATLFA 160
+A +I +NG L G+ + V + +R D G N+FV + E+ D L
Sbjct: 150 AANKSIEKVNGMLLNGKKVYVGKFMSRKERYDAMGGQQKKFTNVFVKNFGDELDDEGLRE 209
Query: 161 CFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATK 220
F Y +VM D +GR++GFGFV F + DA++A +DL K + R + A K
Sbjct: 210 MFERYGKIVSHKVMQDDHSGRNKGFGFVCFEDPIDAENACDDLNMKDINGRILYVGRAQK 269
Query: 221 GAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLH 280
+ ++ ++ ++ EL N Q +YV NL + L
Sbjct: 270 -----KIERQAELRNRFELMKAER------------ANRYQGVNLYVKNLDDSLDDERLR 312
Query: 281 RHFHSLGAGVIEEVRVQ--RDKGFGFVRYSTHAEAALAI 317
+ F G +V + R KGFGFV +S+ EA A+
Sbjct: 313 KEFMPFGTITSAKVMSEGGRSKGFGFVCFSSPEEATKAV 351
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 66/267 (24%), Positives = 119/267 (44%), Gaps = 44/267 (16%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIR----KDKSSYGFIHYFDRRSAAMAILS 113
S+YVG++H VTE +L E FSS GP+ ++ R + Y ++++ A A+ S
Sbjct: 12 SLYVGDLHNDVTEAMLFEKFSSAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDS 71
Query: 114 LNGRHLFGQPIKVNWAYASGQREDT---SGHFNIFVGDLSPEVTDATLFACFSVYPSCSD 170
+N + G+PI++ W+ QR+ + SG N+F+ +L + + ++ FS +
Sbjct: 72 MNFDVIKGRPIRIMWS----QRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGDILS 127
Query: 171 ARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQS 230
+V+ D+ S+G+GFV F ++ A +I + G L +++
Sbjct: 128 CKVVCDENG--SKGYGFVHFATEEAANKSIEKVNGMLLNGKKVYV--------------- 170
Query: 231 SDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGA-- 288
G KE + + ++T V+V N E+ L F G
Sbjct: 171 -----------GKFMSRKERYDAMGGQQK-KFTNVFVKNFGDELDDEGLREMFERYGKIV 218
Query: 289 --GVIEEVRVQRDKGFGFVRYSTHAEA 313
V+++ R+KGFGFV + +A
Sbjct: 219 SHKVMQDDHSGRNKGFGFVCFEDPIDA 245
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 97/204 (47%), Gaps = 25/204 (12%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS----YGFIHYFDRRSAAMAILS 113
+V+V N ++ + L+E+F G + K+++ D S +GF+ + D A A
Sbjct: 192 NVFVKNFGDELDDEGLREMFERYGKIVSHKVMQDDHSGRNKGFGFVCFEDPIDAENACDD 251
Query: 114 LNGRHLFGQPIKVNWAYASGQRE-DTSGHF--------------NIFVGDLSPEVTDATL 158
LN + + G+ + V A +R+ + F N++V +L + D L
Sbjct: 252 LNMKDINGRILYVGRAQKKIERQAELRNRFELMKAERANRYQGVNLYVKNLDDSLDDERL 311
Query: 159 FACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWA 218
F + + + A+VM + GRS+GFGFV F + ++A A+ ++ G+ + ++ + A
Sbjct: 312 RKEFMPFGTITSAKVMSE--GGRSKGFGFVCFSSPEEATKAVTEMNGRIVSTKPLYVALA 369
Query: 219 TKGAGNNEDKQSSDAKSVVELTNG 242
+ ED+++ A ++ +G
Sbjct: 370 QR----KEDRKAHLASQFMQRMSG 389
>gi|357111822|ref|XP_003557709.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
[Brachypodium distachyon]
Length = 361
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 83/291 (28%), Positives = 138/291 (47%), Gaps = 46/291 (15%)
Query: 57 RSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS-----YGFIHYFDRRSAAMAI 111
RS+ +G + + E L+ F+ + P +++++K + +G++++ D +A +
Sbjct: 51 RSLRIGGLLDWMNEEYLRSCFTRS-PELLSAVVKRNKETGKSECFGYLNFADHATADQIL 109
Query: 112 LSLNGRHL--FGQPIKVNWAYASG-QREDTSGHFNIFVGDLSPEVTDATLFACF-SVYPS 167
S NG+ + + +++W Q+ D GH NI+VGDL+ +VTD L F S YPS
Sbjct: 110 QSYNGQKMPNADRDFRLSWVTNYPVQKRDDDGH-NIYVGDLAFDVTDFMLHHVFKSRYPS 168
Query: 168 CSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNED 227
A++ WD GRS+G+GFV F + + + A+ ++ G + +R +R ATK AG D
Sbjct: 169 VKHAKIAWDHFNGRSKGYGFVVFGDVNERRQAMTEMNGAYCSTRPMRVGPATKMAGKYSD 228
Query: 228 KQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLG 287
S++ T ++VG L VT DL + F G
Sbjct: 229 SDSNN------------------------------TRLFVGGLDRIVTDEDLKKAFSPYG 258
Query: 288 AGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWG 338
+ EV+V K GFV Y A A A+++ N S L ++ SWG
Sbjct: 259 E--LTEVKVIAGKKCGFVTYLNRASAEEAMRILN---GSLLGDNTIRISWG 304
>gi|348502707|ref|XP_003438909.1| PREDICTED: embryonic polyadenylate-binding protein-like
[Oreochromis niloticus]
Length = 623
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/284 (27%), Positives = 130/284 (45%), Gaps = 31/284 (10%)
Query: 49 PGFDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRRS 106
PG S ++++ N+ + L + FS+ G + CK++ +K S YGF+H+ + +
Sbjct: 91 PGLRKSGVGNIFIKNMDESIDNKALYDTFSAFGNILSCKVVCDEKGSKGYGFVHFETQEA 150
Query: 107 AAMAILSLNGRHLFGQPIKVNWAYASGQREDTSG-----HFNIFVGDLSPEVTDATLFAC 161
A AI ++NG L + + V + +RE G N+++ + + TD L
Sbjct: 151 ANRAIETMNGMLLNDRKVFVGHFKSRKEREVEFGSKAMKFTNVYIKNFGEDFTDEKLKEV 210
Query: 162 FSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKG 221
FS + RVM D+K GRSRGFGFV++ + +DAQ A+N++ GK + + + A K
Sbjct: 211 FSAFGRTLSVRVMKDEK-GRSRGFGFVNYAHHEDAQKAVNEMNGKEINGKILYVGRAQK- 268
Query: 222 AGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHR 281
++Q + ++ + Q +YV NL + L +
Sbjct: 269 ---RLERQGELKRKFDQIKQDRIQ-------------RYQGVNLYVKNLDDSIDDERLRK 312
Query: 282 HFHSLGAGVIEEVRVQRD----KGFGFVRYSTHAEAALAIQMGN 321
F G I +V D KGFGFV +S+ EA A+ N
Sbjct: 313 EFAPYGT--ITSAKVMTDGSQSKGFGFVCFSSPEEATKAVTEMN 354
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 125/274 (45%), Gaps = 43/274 (15%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIR----KDKSSYGFIHYFDRRSAAMAILS 113
S+YVG++H VTE +L + FS GP+ ++ R + Y ++++ A A+ +
Sbjct: 12 SLYVGDLHPDVTEAMLYQKFSPAGPIMSIRVCRDIITRRSLGYAYVNFQQPADAECALDT 71
Query: 114 LNGRHLFGQPIKVNWAYAS-GQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDAR 172
+N + G+PI++ W+ G R+ SG NIF+ ++ + + L+ FS + + +
Sbjct: 72 MNYDVIKGRPIRIMWSQRDPGLRK--SGVGNIFIKNMDESIDNKALYDTFSAFGNILSCK 129
Query: 173 VMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSSD 232
V+ D+K S+G+GFV F Q+ A AI + G L R++
Sbjct: 130 VVCDEKG--SKGYGFVHFETQEAANRAIETMNGMLLNDRKVFV----------------- 170
Query: 233 AKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIE 292
G + KE E ++T VY+ N + T L F + G +
Sbjct: 171 ---------GHFKSRKE-REVEFGSKAMKFTNVYIKNFGEDFTDEKLKEVFSAFGRTL-- 218
Query: 293 EVRVQRD-----KGFGFVRYSTHAEAALAIQMGN 321
VRV +D +GFGFV Y+ H +A A+ N
Sbjct: 219 SVRVMKDEKGRSRGFGFVNYAHHEDAQKAVNEMN 252
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 89/181 (49%), Gaps = 20/181 (11%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS---YGFIHYFDRRSAAMAILSL 114
+VY+ N T+ L+EVFS+ G ++++ +K +GF++Y A A+ +
Sbjct: 192 NVYIKNFGEDFTDEKLKEVFSAFGRTLSVRVMKDEKGRSRGFGFVNYAHHEDAQKAVNEM 251
Query: 115 NGRHLFGQPIKVNWAYASGQRE-DTSGHF--------------NIFVGDLSPEVTDATLF 159
NG+ + G+ + V A +R+ + F N++V +L + D L
Sbjct: 252 NGKEINGKILYVGRAQKRLERQGELKRKFDQIKQDRIQRYQGVNLYVKNLDDSIDDERLR 311
Query: 160 ACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT 219
F+ Y + + A+VM D +S+GFGFV F + ++A A+ ++ G+ + ++ + A
Sbjct: 312 KEFAPYGTITSAKVMTD--GSQSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQ 369
Query: 220 K 220
+
Sbjct: 370 R 370
>gi|403214377|emb|CCK68878.1| hypothetical protein KNAG_0B04440 [Kazachstania naganishii CBS
8797]
Length = 397
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 90/319 (28%), Positives = 152/319 (47%), Gaps = 49/319 (15%)
Query: 59 VYVGNIHTQVTEPLLQEVFSSTGPVE-GCKLIRKDKS-----------SYGFIHYFDRRS 106
+Y+G++ E +++ ++SS G K++ ++ + Y FI + +
Sbjct: 56 LYMGDLEPSWDENVIKRIWSSIGEDNISVKMMWQNNNYMGNESGPRNQGYCFIDFPTHFN 115
Query: 107 AAMAILSLNGRHLFGQP---IKVNWAYAS-----GQREDTSGHFNIFVGDLSPEVTDATL 158
A+ A+L N + G P +K+NWA +S G +F+IFVGDL+P VT+A L
Sbjct: 116 ASNALLK-NKMSIPGHPHKKLKLNWASSSAPSTAGVSTTGGNNFSIFVGDLAPNVTEAQL 174
Query: 159 FACF-SVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNW 217
F F S YPS A+V+ D TG S+G+GF+ FR+ D Q+A+ ++ G +L R ++
Sbjct: 175 FDLFISRYPSTEHAKVVIDLSTGVSKGYGFIRFRDPADQQTALAEMQGVFLNGRALKVGM 234
Query: 218 ATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNT--------------EAPENN---- 259
++ + + ++ V G S+ +NT + P N
Sbjct: 235 SS----GQSNSGAGGSRQVGHDRYGGSKPAGGKSNTPNSALFSQFMYPIQQQPALNHFTD 290
Query: 260 PQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQM 319
P TTV++G L+P V + +L ++F G I V++ KG GFV+Y A AI
Sbjct: 291 PNNTTVFIGGLSPLVKEEELRQYFQPFGE--IVYVKIPVGKGCGFVQYIDRISAETAISQ 348
Query: 320 GNTTQSSYLFGKQMKCSWG 338
Q + +++ SWG
Sbjct: 349 ---MQGFPISNSRVRLSWG 364
>gi|366996152|ref|XP_003677839.1| hypothetical protein NCAS_0H01810 [Naumovozyma castellii CBS 4309]
gi|342303709|emb|CCC71491.1| hypothetical protein NCAS_0H01810 [Naumovozyma castellii CBS 4309]
Length = 443
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 97/323 (30%), Positives = 151/323 (46%), Gaps = 50/323 (15%)
Query: 45 GNLPPGFDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSSYGFIHYFDR 104
G+L P +D + R ++ + V ++ S+ G +G Y F+ +
Sbjct: 52 GDLDPNWDENVIRQIWRDLGESNVHVKMMWN--SNLGVNQG----------YCFVEFPSM 99
Query: 105 RSAAMAILSLNGRHLFGQP---IKVNWAYASGQREDTSGHFNIFVGDLSPEVTDATLFAC 161
A+L NG + G P +K+NWA A G + SG F++FVGDLSP VT+A LF
Sbjct: 100 EHGNNALLK-NGIVIPGFPQRRLKLNWASA-GANGNNSG-FSVFVGDLSPNVTEAQLFEL 156
Query: 162 F-SVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATK 220
F YPS A+V+ DQ TG S+ +GFV F + D Q + ++ G +L R I+ T
Sbjct: 157 FIGRYPSTCHAKVVHDQLTGVSKCYGFVKFNSATDQQRVLVEMQGVFLNGRSIKVG-LTG 215
Query: 221 GAGNNEDKQSSDA-----------KSVVELTNGSSEDGKETTNTEAPE------------ 257
GA N+ +S A S +++G+S + T + +
Sbjct: 216 GAHNDNSNTNSMAGGRSRFGGMPPNSASTVSSGNSNNRNMTPLLNSSQFMYPVQQQPTLN 275
Query: 258 --NNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAAL 315
+P TTV++G L+ V++ DL ++F G I V++ KG GFV+Y A L
Sbjct: 276 HLTDPNNTTVFIGGLSSLVSEDDLRQYFQPFGD--IIYVKIPTGKGCGFVQYVDRLSAEL 333
Query: 316 AIQMGNTTQSSYLFGKQMKCSWG 338
AI + Q L +++ SWG
Sbjct: 334 AI---SKMQGFPLANSRIRLSWG 353
Score = 41.2 bits (95), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 3/83 (3%)
Query: 52 DPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSSYGFIHYFDRRSAAMAI 111
DP+ +V++G + + V+E L++ F G + K+ GF+ Y DR SA +AI
Sbjct: 279 DPNNT-TVFIGGLSSLVSEDDLRQYFQPFGDIIYVKI--PTGKGCGFVQYVDRLSAELAI 335
Query: 112 LSLNGRHLFGQPIKVNWAYASGQ 134
+ G L I+++W +S Q
Sbjct: 336 SKMQGFPLANSRIRLSWGRSSKQ 358
>gi|339242463|ref|XP_003377157.1| putative RNA recognition motif protein [Trichinella spiralis]
gi|316974060|gb|EFV57598.1| putative RNA recognition motif protein [Trichinella spiralis]
Length = 352
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/223 (33%), Positives = 114/223 (51%), Gaps = 26/223 (11%)
Query: 122 QPIKVNWAYASGQ--REDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKT 179
Q ++VNWA + G + DTS + + + S+ SD +V+ D +T
Sbjct: 74 QEMRVNWATSPGTQAKVDTSKKHLLLMEKFRKRPPLHQIVRADSLLFISSDVKVIRDLQT 133
Query: 180 GRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVEL 239
+S+G+GFVS+ + DA+ AI + G+WLG R IR NWAT+ G A+++
Sbjct: 134 LKSKGYGFVSYVSHDDAERAIEQMNGQWLGRRTIRTNWATRKPG-------LPAQNL--- 183
Query: 240 TNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEV--TQLDLHRHFHSLGAGVIEEVRVQ 297
G+ T + +++PQ TTVYVG++A T DL R F G+ I EVRV
Sbjct: 184 -------GQLTFDDVMAQSSPQNTTVYVGSVAANTTGTHDDLRRIFARFGS--ILEVRVF 234
Query: 298 RDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSK 340
+ +G+ FVR+ AA AI T+ + G ++CSWG +
Sbjct: 235 KQQGYAFVRFDNKESAAHAILNITGTE---INGSSVRCSWGKE 274
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 72/164 (43%), Gaps = 30/164 (18%)
Query: 86 CKLIRKDKS----SYGFIHYFDRRSAAMAILSLNGRHLFGQPIKVNWA------------ 129
K+IR ++ YGF+ Y A AI +NG+ L + I+ NWA
Sbjct: 125 VKVIRDLQTLKSKGYGFVSYVSHDDAERAIEQMNGQWLGRRTIRTNWATRKPGLPAQNLG 184
Query: 130 ---YASGQREDTSGHFNIFVGDLSPEVTDA--TLFACFSVYPSCSDARVMWDQKTGRSRG 184
+ + + + ++VG ++ T L F+ + S + RV + +G
Sbjct: 185 QLTFDDVMAQSSPQNTTVYVGSVAANTTGTHDDLRRIFARFGSILEVRVF------KQQG 238
Query: 185 FGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKG---AGNN 225
+ FV F N++ A AI ++TG + +RC+W +G A NN
Sbjct: 239 YAFVRFDNKESAAHAILNITGTEINGSSVRCSWGKEGGLAASNN 282
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 43/78 (55%), Gaps = 4/78 (5%)
Query: 58 SVYVGNI--HTQVTEPLLQEVFSSTGPVEGCKLIRKDKSSYGFIHYFDRRSAAMAILSLN 115
+VYVG++ +T T L+ +F+ G + ++ ++ Y F+ + ++ SAA AIL++
Sbjct: 201 TVYVGSVAANTTGTHDDLRRIFARFGSILEVRVFKQQ--GYAFVRFDNKESAAHAILNIT 258
Query: 116 GRHLFGQPIKVNWAYASG 133
G + G ++ +W G
Sbjct: 259 GTEINGSSVRCSWGKEGG 276
>gi|326503608|dbj|BAJ86310.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 746
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 128/281 (45%), Gaps = 35/281 (12%)
Query: 52 DPSTCRS----VYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKD---KSSYGFIHYFDR 104
DPS+ RS +++ N+ + L + FS+ G + CK+ D +GF+ Y
Sbjct: 201 DPSSRRSGSANIFIKNLDKTIDNKTLHDTFSAFGAILSCKVAMDDIGQSKGFGFVQYEKE 260
Query: 105 RSAAMAILSLNGRHLFGQPIKVNWAYASGQREDTSGHF---NIFVGDLSPEVTDATLFAC 161
SA A+ SLNG + +P+ V +R+++S N+FV +LS T L
Sbjct: 261 ESAQSAMKSLNGMLINDKPVYVGPFLRKQERDNSSDKAKFNNVFVKNLSESTTKEDLIKV 320
Query: 162 FSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKG 221
FS Y + + A VM G+SR FGFV+F + DA A+ +L GK + ++ W G
Sbjct: 321 FSEYGTITSAVVMIGMD-GKSRCFGFVNFESPDDAARAVEELNGKKINDKE----WYV-G 374
Query: 222 AGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHR 281
+ ++ D K E + + D + N +Y+ NL +T L
Sbjct: 375 RAQKKSEREMDLKRRFEQSMKDAADKYQGQN------------LYLKNLDDGITDDQLRE 422
Query: 282 HFHSLGAGVIEEVRVQRD-----KGFGFVRYSTHAEAALAI 317
F + G I ++ RD KG GFV +ST EA+ A+
Sbjct: 423 LFSNFGK--ITSCKIMRDQNGVSKGSGFVSFSTREEASQAL 461
Score = 97.8 bits (242), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 75/275 (27%), Positives = 124/275 (45%), Gaps = 42/275 (15%)
Query: 53 PSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKS----SYGFIHYFDRRSAA 108
P S+YVG++ VT+ L E+FS G V ++ R S Y +++Y + AA
Sbjct: 118 PLPTTSLYVGDLEANVTDSQLYELFSQAGQVVSVRVCRDVNSRRSLGYAYVNYSNPMDAA 177
Query: 109 MAILSLNGRHLFGQPIKVNWAY--ASGQREDTSGHFNIFVGDLSPEVTDATLFACFSVYP 166
A+ +LN L +PI+V ++ S +R SG NIF+ +L + + TL FS +
Sbjct: 178 RAMEALNFAPLNNKPIRVMYSNRDPSSRR---SGSANIFIKNLDKTIDNKTLHDTFSAFG 234
Query: 167 SCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNE 226
+ +V D G+S+GFGFV + ++ AQSA+ L G + + + +
Sbjct: 235 AILSCKVAMDD-IGQSKGFGFVQYEKEESAQSAMKSLNGMLINDKPVYVGPFLR------ 287
Query: 227 DKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSL 286
KQ D S + ++ V+V NL+ T+ DL + F
Sbjct: 288 -KQERDNSS----------------------DKAKFNNVFVKNLSESTTKEDLIKVFSEY 324
Query: 287 GAGVIEEVRVQRD---KGFGFVRYSTHAEAALAIQ 318
G V + D + FGFV + + +AA A++
Sbjct: 325 GTITSAVVMIGMDGKSRCFGFVNFESPDDAARAVE 359
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 88/187 (47%), Gaps = 19/187 (10%)
Query: 52 DPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPV-EGCKLIRKDKSS--YGFIHYFDRRSAA 108
D + +V+V N+ T+ L +VFS G + +I D S +GF+++ AA
Sbjct: 296 DKAKFNNVFVKNLSESTTKEDLIKVFSEYGTITSAVVMIGMDGKSRCFGFVNFESPDDAA 355
Query: 109 MAILSLNGRHLFGQPIKVNWAYASGQRE-DTSGHF--------------NIFVGDLSPEV 153
A+ LNG+ + + V A +RE D F N+++ +L +
Sbjct: 356 RAVEELNGKKINDKEWYVGRAQKKSEREMDLKRRFEQSMKDAADKYQGQNLYLKNLDDGI 415
Query: 154 TDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQI 213
TD L FS + + ++M DQ G S+G GFVSF +++A A+ ++ GK + + +
Sbjct: 416 TDDQLRELFSNFGKITSCKIMRDQ-NGVSKGSGFVSFSTREEASQALTEMNGKMISGKPL 474
Query: 214 RCNWATK 220
+A +
Sbjct: 475 YVAFAQR 481
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 74/184 (40%), Gaps = 40/184 (21%)
Query: 143 NIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAIND 202
+++VGDL VTD+ L+ FS RV D + RS G+ +V++ N DA A+
Sbjct: 123 SLYVGDLEANVTDSQLYELFSQAGQVVSVRVCRDVNSRRSLGYAYVNYSNPMDAARAMEA 182
Query: 203 LTGKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQY 262
L L ++ IR ++ N D S + S
Sbjct: 183 LNFAPLNNKPIRVMYS------NRDPSSRRSGS--------------------------- 209
Query: 263 TTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRD-----KGFGFVRYSTHAEAALAI 317
+++ NL + LH F + GA I +V D KGFGFV+Y A A+
Sbjct: 210 ANIFIKNLDKTIDNKTLHDTFSAFGA--ILSCKVAMDDIGQSKGFGFVQYEKEESAQSAM 267
Query: 318 QMGN 321
+ N
Sbjct: 268 KSLN 271
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 48/83 (57%), Gaps = 3/83 (3%)
Query: 57 RSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDK---SSYGFIHYFDRRSAAMAILS 113
+++Y+ N+ +T+ L+E+FS+ G + CK++R GF+ + R A+ A+
Sbjct: 404 QNLYLKNLDDGITDDQLRELFSNFGKITSCKIMRDQNGVSKGSGFVSFSTREEASQALTE 463
Query: 114 LNGRHLFGQPIKVNWAYASGQRE 136
+NG+ + G+P+ V +A +R+
Sbjct: 464 MNGKMISGKPLYVAFAQRKEERK 486
>gi|351705667|gb|EHB08586.1| Splicing factor 3B subunit 4 [Heterocephalus glaber]
Length = 486
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 63/194 (32%), Positives = 104/194 (53%), Gaps = 10/194 (5%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS-----YGFIHYFDRRSAAMAIL 112
+VYVG + +V+EPLL E+F GPV + KD+ + YGF+ + A AI
Sbjct: 14 TVYVGGLDEKVSEPLLWELFLQAGPVVNTHM-PKDRVTGQHQGYGFVEFLSEEDADYAIK 72
Query: 113 SLNGRHLFGQPIKVNWAYASGQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSC-SDA 171
+N L+G+PI+VN A A + D NIF+G+L PE+ + L+ FS +
Sbjct: 73 IMNMIKLYGKPIRVNKASAHNKNLDVGA--NIFIGNLDPEIDEKLLYDTFSAFGVILQTP 130
Query: 172 RVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSS 231
++M D TG S+G+ F++F + + +AI + G++L +R I ++A K E + S
Sbjct: 131 KIMRDPDTGNSKGYAFINFASFDASDAAIEAMNGQYLCNRPITVSYAFKKDSKGE-RHGS 189
Query: 232 DAKSVVELTNGSSE 245
A+ ++ N S+
Sbjct: 190 AAERLLAAQNPLSQ 203
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/216 (22%), Positives = 96/216 (44%), Gaps = 44/216 (20%)
Query: 131 ASGQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSF 190
A+G + + ++VG L +V++ L+ F + + D+ TG+ +G+GFV F
Sbjct: 2 AAGPISERNQDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEF 61
Query: 191 RNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKET 250
+++DA AI + L + IR N K + +N++ L G++
Sbjct: 62 LSEEDADYAIKIMNMIKLYGKPIRVN---KASAHNKN-----------LDVGAN------ 101
Query: 251 TNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRD------KGFGF 304
+++GNL PE+ + L+ F + G +++ ++ RD KG+ F
Sbjct: 102 --------------IFIGNLDPEIDEKLLYDTFSAFGV-ILQTPKIMRDPDTGNSKGYAF 146
Query: 305 VRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSK 340
+ +++ + AI+ N YL + + S+ K
Sbjct: 147 INFASFDASDAAIEAMN---GQYLCNRPITVSYAFK 179
>gi|432114293|gb|ELK36221.1| Splicing factor 3B subunit 4 [Myotis davidii]
Length = 379
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 63/194 (32%), Positives = 104/194 (53%), Gaps = 10/194 (5%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS-----YGFIHYFDRRSAAMAIL 112
+VYVG + +V+EPLL E+F GPV + KD+ + YGF+ + A AI
Sbjct: 14 TVYVGGLDEKVSEPLLWELFLQAGPVVNTHM-PKDRVTGQHQGYGFVEFLSEEDADYAIK 72
Query: 113 SLNGRHLFGQPIKVNWAYASGQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSC-SDA 171
+N L+G+PI+VN A A + D NIF+G+L PE+ + L+ FS +
Sbjct: 73 IMNMIKLYGKPIRVNKASAHNKNLDVGA--NIFIGNLDPEIDEKLLYDTFSAFGVILQTP 130
Query: 172 RVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSS 231
++M D TG S+G+ F++F + + +AI + G++L +R I ++A K E + S
Sbjct: 131 KIMRDPDTGNSKGYAFINFASFDASDAAIEAMNGQYLCNRPITVSYAFKKDSKGE-RHGS 189
Query: 232 DAKSVVELTNGSSE 245
A+ ++ N S+
Sbjct: 190 AAERLLAAQNPLSQ 203
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 48/216 (22%), Positives = 93/216 (43%), Gaps = 44/216 (20%)
Query: 131 ASGQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSF 190
A+G + + ++VG L +V++ L+ F + + D+ TG+ +G+GFV F
Sbjct: 2 AAGPISERNQDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEF 61
Query: 191 RNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKET 250
+++DA AI + L + IR N A+ N L G++
Sbjct: 62 LSEEDADYAIKIMNMIKLYGKPIRVNKASAHNKN--------------LDVGAN------ 101
Query: 251 TNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRD------KGFGF 304
+++GNL PE+ + L+ F + G +++ ++ RD KG+ F
Sbjct: 102 --------------IFIGNLDPEIDEKLLYDTFSAFGV-ILQTPKIMRDPDTGNSKGYAF 146
Query: 305 VRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSK 340
+ +++ + AI+ N YL + + S+ K
Sbjct: 147 INFASFDASDAAIEAMN---GQYLCNRPITVSYAFK 179
>gi|431922543|gb|ELK19486.1| Polyadenylate-binding protein 4 [Pteropus alecto]
Length = 720
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 128/276 (46%), Gaps = 47/276 (17%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIR----KDKSSYGFIHYFDRRSAAMAILS 113
S+YVG++H+ VTE +L E FS GPV ++ R + Y ++++ A A+ +
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 114 LNGRHLFGQPIKVNWAYASGQREDT---SGHFNIFVGDLSPEVTDATLFACFSVYPSCSD 170
+N + G+PI++ W+ QR+ + SG N+F+ +L + + L+ FS + +
Sbjct: 72 MNFDVIKGKPIRIMWS----QRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 171 ARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQS 230
+V+ D+ S+G+ FV F Q+ A AI + G L R++ G + ++
Sbjct: 128 CKVVCDENG--SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFV-------GRFKSRKE 178
Query: 231 SDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGV 290
+A EL + E +T VY+ N EV L F G +
Sbjct: 179 REA----ELGAKAKE----------------FTNVYIKNFGEEVDDESLKELFSQFGKTL 218
Query: 291 IEEVRVQRD-----KGFGFVRYSTHAEAALAIQMGN 321
V+V RD KGFGFV Y H +A A++ N
Sbjct: 219 --SVKVMRDPSGKSKGFGFVSYEKHEDANKAVEEMN 252
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 130/283 (45%), Gaps = 31/283 (10%)
Query: 52 DPSTCRS----VYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRR 105
DPS +S V++ N+ + L + FS+ G + CK++ + S Y F+H+ +
Sbjct: 90 DPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQE 149
Query: 106 SAAMAILSLNGRHLFGQPIKVNWAYASGQREDTSG-----HFNIFVGDLSPEVTDATLFA 160
+A AI +NG L + + V + +RE G N+++ + EV D +L
Sbjct: 150 AADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKE 209
Query: 161 CFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATK 220
FS + +VM D +G+S+GFGFVS+ +DA A+ ++ GK + + I A K
Sbjct: 210 LFSQFGKTLSVKVMRD-PSGKSKGFGFVSYEKHEDANKAVEEMNGKEINGKVIFVGRAQK 268
Query: 221 GAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLH 280
++Q+ EL + +E + Q +Y+ NL + L
Sbjct: 269 KV----ERQA-------ELKRKFEQLKQERI------SRYQGVNLYIKNLDDTIDDEKLR 311
Query: 281 RHFHSLGAGVIEEVRVQ--RDKGFGFVRYSTHAEAALAIQMGN 321
+ F G+ +V ++ R KGFGFV +S+ EA A+ N
Sbjct: 312 KEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMN 354
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 88/181 (48%), Gaps = 20/181 (11%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRK---DKSSYGFIHYFDRRSAAMAILSL 114
+VY+ N +V + L+E+FS G K++R +GF+ Y A A+ +
Sbjct: 192 NVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGKSKGFGFVSYEKHEDANKAVEEM 251
Query: 115 NGRHLFGQPIKVNWAYASGQR-------------EDTSGH--FNIFVGDLSPEVTDATLF 159
NG+ + G+ I V A +R E S + N+++ +L + D L
Sbjct: 252 NGKEINGKVIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLR 311
Query: 160 ACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT 219
FS + S + A+VM + GRS+GFGFV F + ++A A+ ++ G+ +GS+ + A
Sbjct: 312 KEFSPFGSITSAKVMLED--GRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQ 369
Query: 220 K 220
+
Sbjct: 370 R 370
Score = 38.5 bits (88), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRRSAAMAILSLN 115
++Y+ N+ + + L++ FS G + K++ +D S +GF+ + A A+ +N
Sbjct: 295 NLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMN 354
Query: 116 GRHLFGQPIKVNWAYASGQRE 136
GR + +P+ V A +R+
Sbjct: 355 GRIVGSKPLYVALAQRKEERK 375
>gi|194210863|ref|XP_001488649.2| PREDICTED: splicing factor 3B subunit 4-like [Equus caballus]
Length = 450
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 63/194 (32%), Positives = 104/194 (53%), Gaps = 10/194 (5%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS-----YGFIHYFDRRSAAMAIL 112
+VYVG + +V+EPLL E+F GPV + KD+ + YGF+ + A AI
Sbjct: 14 TVYVGGLDEKVSEPLLWELFLQAGPVVNTHM-PKDRVTGQHQGYGFVEFLSEEDADYAIK 72
Query: 113 SLNGRHLFGQPIKVNWAYASGQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSC-SDA 171
+N L+G+PI+VN A A + D NIF+G+L PE+ + L+ FS +
Sbjct: 73 IMNMIKLYGKPIRVNKASAHNKNLDVGA--NIFIGNLDPEIDEKLLYDTFSAFGVILQTP 130
Query: 172 RVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSS 231
++M D TG S+G+ F++F + + +AI + G++L +R I ++A K E + S
Sbjct: 131 KIMRDPDTGNSKGYAFINFASFDASDAAIEAMNGQYLCNRPITVSYAFKKDSKGE-RHGS 189
Query: 232 DAKSVVELTNGSSE 245
A+ ++ N S+
Sbjct: 190 AAERLLAAQNPLSQ 203
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 91/203 (44%), Gaps = 44/203 (21%)
Query: 144 IFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDL 203
++VG L +V++ L+ F + + D+ TG+ +G+GFV F +++DA AI +
Sbjct: 15 VYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYAIKIM 74
Query: 204 TGKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYT 263
L + IR N K + +N++ L G++
Sbjct: 75 NMIKLYGKPIRVN---KASAHNKN-----------LDVGAN------------------- 101
Query: 264 TVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRD------KGFGFVRYSTHAEAALAI 317
+++GNL PE+ + L+ F + G +++ ++ RD KG+ F+ +++ + AI
Sbjct: 102 -IFIGNLDPEIDEKLLYDTFSAFGV-ILQTPKIMRDPDTGNSKGYAFINFASFDASDAAI 159
Query: 318 QMGNTTQSSYLFGKQMKCSWGSK 340
+ N YL + + S+ K
Sbjct: 160 EAMN---GQYLCNRPITVSYAFK 179
>gi|355718837|gb|AES06403.1| splicing factor 3b, subunit 4, 49kDa [Mustela putorius furo]
Length = 406
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 63/194 (32%), Positives = 104/194 (53%), Gaps = 10/194 (5%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS-----YGFIHYFDRRSAAMAIL 112
+VYVG + +V+EPLL E+F GPV + KD+ + YGF+ + A AI
Sbjct: 12 TVYVGGLDEKVSEPLLWELFLQAGPVVNTHM-PKDRVTGQHQGYGFVEFLSEEDADYAIK 70
Query: 113 SLNGRHLFGQPIKVNWAYASGQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSC-SDA 171
+N L+G+PI+VN A A + D NIF+G+L PE+ + L+ FS +
Sbjct: 71 IMNMIKLYGKPIRVNKASAHNKNLDVGA--NIFIGNLDPEIDEKLLYDTFSAFGVILQTP 128
Query: 172 RVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSS 231
++M D TG S+G+ F++F + + +AI + G++L +R I ++A K E + S
Sbjct: 129 KIMRDPDTGNSKGYAFINFASFDASDAAIEAMNGQYLCNRPITVSYAFKKDSKGE-RHGS 187
Query: 232 DAKSVVELTNGSSE 245
A+ ++ N S+
Sbjct: 188 AAERLLAAQNPLSQ 201
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 88/203 (43%), Gaps = 44/203 (21%)
Query: 144 IFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDL 203
++VG L +V++ L+ F + + D+ TG+ +G+GFV F +++DA AI +
Sbjct: 13 VYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYAIKIM 72
Query: 204 TGKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYT 263
L + IR N A+ N L G++
Sbjct: 73 NMIKLYGKPIRVNKASAHNKN--------------LDVGAN------------------- 99
Query: 264 TVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRD------KGFGFVRYSTHAEAALAI 317
+++GNL PE+ + L+ F + G +++ ++ RD KG+ F+ +++ + AI
Sbjct: 100 -IFIGNLDPEIDEKLLYDTFSAFGV-ILQTPKIMRDPDTGNSKGYAFINFASFDASDAAI 157
Query: 318 QMGNTTQSSYLFGKQMKCSWGSK 340
+ N YL + + S+ K
Sbjct: 158 EAMN---GQYLCNRPITVSYAFK 177
>gi|50288915|ref|XP_446887.1| hypothetical protein [Candida glabrata CBS 138]
gi|49526196|emb|CAG59820.1| unnamed protein product [Candida glabrata]
Length = 555
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 89/322 (27%), Positives = 155/322 (48%), Gaps = 52/322 (16%)
Query: 59 VYVGNIHTQVTEPLLQEVFSSTGPVE-GCKLI-------RKDKSSYGFIHYFDRRSAAMA 110
+Y+G++ E +++ ++++ G G +++ + Y F+ + A+ A
Sbjct: 86 LYMGDLDPSWDEAVVKGIWAALGEENIGVRMMWGGDADFHRKNLGYCFVEFPSPAHASNA 145
Query: 111 ILSLNGRHLFG---QPIKVNWA-----------YASGQREDTSGHFNIFVGDLSPEVTDA 156
++ NG + G + +K+NW+ A+G + + +IFVGDL+P VT+A
Sbjct: 146 LMK-NGMEIPGFVHKKLKLNWSAQSVNNGSGASVANGAVANQQTNNSIFVGDLAPSVTEA 204
Query: 157 TLFACF-SVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRC 215
LF F + YPS A+VM+DQ TG S+G+GFV F++ D Q A+ ++ G +L R I+
Sbjct: 205 QLFDLFINKYPSTVHAKVMYDQLTGISKGYGFVKFKSSMDQQRALVEMQGCFLNGRAIKI 264
Query: 216 NWATKGAGNNEDKQSSDAKSVVELTNGSSEDG----KETTNTEAPE-------------- 257
AG N + S+ + + N + +G + N + P+
Sbjct: 265 GI----AGGNNNNNSNSNYNNQRMANDNISNGLGQQSRSLNGQLPQQFVNATPQQPVLNH 320
Query: 258 -NNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALA 316
+P TTV+VG L+P VT+ +L +F G I V++ KG GFV+Y + A A
Sbjct: 321 FTDPNNTTVFVGGLSPLVTEDELRSYFEPF--GTIIYVKIPAGKGCGFVQYVERSSAETA 378
Query: 317 IQMGNTTQSSYLFGKQMKCSWG 338
I Q + +++ SWG
Sbjct: 379 IT---KMQGFPIANSRVRLSWG 397
>gi|332858528|ref|XP_003317002.1| PREDICTED: poly(A) binding protein, cytoplasmic 1-like isoform 1
[Pan troglodytes]
Length = 330
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 81/279 (29%), Positives = 128/279 (45%), Gaps = 43/279 (15%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIR----KDKSSYGFIHYFDRRSAAMAILS 113
S+YVG++H VTE +L E FS GP+ ++ R + Y +I++ A A+ +
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADAERALDT 71
Query: 114 LNGRHLFGQPIKVNWAYAS-GQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDAR 172
+N L GQPI++ W+ G R+ SG NIF+ +L + + L+ FS + + +
Sbjct: 72 MNFEMLKGQPIRIMWSQRDPGLRK--SGVGNIFIKNLEDSIDNKALYDTFSTFGNILSCK 129
Query: 173 VMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSSD 232
V D+ SRGFGFV F + AQ AIN + G L R++ G+ + ++ +
Sbjct: 130 VACDEHG--SRGFGFVHFETHEAAQQAINTMNGMLLNDRKV-------FVGHFKSRRERE 180
Query: 233 AKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIE 292
A E ++T +YV NL +V + L F G +
Sbjct: 181 A--------------------ELGARALEFTNIYVKNLPVDVDEQGLQELFSQFGKML-- 218
Query: 293 EVRVQRD-----KGFGFVRYSTHAEAALAIQMGNTTQSS 326
V+V RD + FGFV + H EA A+ N + S
Sbjct: 219 SVKVMRDNSGHSRCFGFVNFEKHEEAQKAVVHMNGKEVS 257
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 86/179 (48%), Gaps = 8/179 (4%)
Query: 49 PGFDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRRS 106
PG S ++++ N+ + L + FS+ G + CK+ + S +GF+H+ +
Sbjct: 91 PGLRKSGVGNIFIKNLEDSIDNKALYDTFSTFGNILSCKVACDEHGSRGFGFVHFETHEA 150
Query: 107 AAMAILSLNGRHLFGQPIKVNWAYASGQREDTSG-----HFNIFVGDLSPEVTDATLFAC 161
A AI ++NG L + + V + +RE G NI+V +L +V + L
Sbjct: 151 AQQAINTMNGMLLNDRKVFVGHFKSRREREAELGARALEFTNIYVKNLPVDVDEQGLQEL 210
Query: 162 FSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATK 220
FS + +VM D +G SR FGFV+F ++AQ A+ + GK + R + A K
Sbjct: 211 FSQFGKMLSVKVMRDN-SGHSRCFGFVNFEKHEEAQKAVVHMNGKEVSGRLLYAGRAQK 268
Score = 45.1 bits (105), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 59/133 (44%), Gaps = 18/133 (13%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDK---SSYGFIHYFDRRSAAMAILSL 114
++YV N+ V E LQE+FS G + K++R + +GF+++ A A++ +
Sbjct: 192 NIYVKNLPVDVDEQGLQELFSQFGKMLSVKVMRDNSGHSRCFGFVNFEKHEEAQKAVVHM 251
Query: 115 NGRHLFGQPIKVNWAYASGQREDTSGH---------------FNIFVGDLSPEVTDATLF 159
NG+ + G+ + A +R++ N++V +L + D L
Sbjct: 252 NGKEVSGRLLYAGRAQKRVERQNELKRRFEQMKQDRLRRYQGVNLYVKNLDDSIDDDKLR 311
Query: 160 ACFSVYPSCSDAR 172
FS Y + A+
Sbjct: 312 KEFSPYGVITSAK 324
>gi|365760349|gb|EHN02076.1| Nam8p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 513
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 100/343 (29%), Positives = 153/343 (44%), Gaps = 65/343 (18%)
Query: 45 GNLPPGFDPSTCRSVYVG------NIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSSYGF 98
G+L P +D +T R ++ N+ P S GP K+ Y F
Sbjct: 49 GDLDPTWDKNTIRQIWTSLGEANVNVRMMWNNPSNNGSRPSVGP--------KNNQGYCF 100
Query: 99 IHYFDRRSAAMAILSLNGRHLFGQP---IKVNWAYAS------GQREDTSGHFNIFVGDL 149
I + AA A+L NG + P +K+NWA +S G + ++IFVGDL
Sbjct: 101 IDFPSSTHAANALLK-NGMLIPNFPNRKLKLNWATSSYSNNINGANMKSGNSYSIFVGDL 159
Query: 150 SPEVTDATLFACF-SVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWL 208
+P VT++ LF F + Y S S A+++ DQ TG S+G+GFV F N + Q A++++ G +L
Sbjct: 160 APNVTESQLFGLFINRYASASHAKIVHDQVTGMSKGYGFVKFTNAGEEQLALSEMQGVFL 219
Query: 209 GSRQIRC---------NWATKG---------AGNNED----KQSSDAKSVVELTNGSSED 246
R I+ N G + NNE+ S + + + N S
Sbjct: 220 NGRAIKVGPTSGQQQQNVHVNGNIDQGRSSSSLNNENFDPRFHSKNQSLLGNVANNMSSK 279
Query: 247 GKETTNTEAPE---------NNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQ 297
G + P +P TTV++G L+ VT+ +L +F G I V++
Sbjct: 280 GNNVSQFIYPVQQQPSLNHFTDPNNTTVFIGGLSSLVTEDELRAYFQPF--GTIVYVKIP 337
Query: 298 RDKGFGFVRYSTH--AEAALAIQMGNTTQSSYLFGKQMKCSWG 338
KG GFV+Y AEAA+A G +S +++ SWG
Sbjct: 338 VGKGCGFVQYVDRLSAEAAIAGMQGFPIANS-----RVRLSWG 375
Score = 37.7 bits (86), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 43/84 (51%), Gaps = 5/84 (5%)
Query: 52 DPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKL-IRKDKSSYGFIHYFDRRSAAMA 110
DP+ +V++G + + VTE L+ F G + K+ + K GF+ Y DR SA A
Sbjct: 301 DPNNT-TVFIGGLSSLVTEDELRAYFQPFGTIVYVKIPVGK---GCGFVQYVDRLSAEAA 356
Query: 111 ILSLNGRHLFGQPIKVNWAYASGQ 134
I + G + ++++W ++ Q
Sbjct: 357 IAGMQGFPIANSRVRLSWGRSAKQ 380
>gi|354476610|ref|XP_003500517.1| PREDICTED: polyadenylate-binding protein 1-like [Cricetulus
griseus]
Length = 637
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/301 (27%), Positives = 137/301 (45%), Gaps = 49/301 (16%)
Query: 52 DPS-TCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS-----YGFIHYFDRR 105
DPS + S+YVG++H VTE +L E FSS GP+ ++ R D+++ Y +++
Sbjct: 5 DPSYSLASLYVGDLHPDVTEAMLYEKFSSAGPILSIRVYR-DRTTRRSLGYASVNFQQLE 63
Query: 106 SAAMAILSLNGRHLFGQPIKVNWAYASGQREDT---SGHFNIFVGDLSPEVTDATLFACF 162
A A+ ++N + G+P+++ W+ QR+ + SG NIFV +L + L+ F
Sbjct: 64 DAERALDTMNFDVIKGKPVRIMWS----QRDPSLRKSGVGNIFVKNLDRSIDSKALYDTF 119
Query: 163 SVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGA 222
S + + +V+ D+ S+G+GFV F Q++A+ AI + G +L R++
Sbjct: 120 SAFGNILSCKVVCDENG--SKGYGFVHFETQEEAERAIEKMNGMFLNDRKVFVGRFK--- 174
Query: 223 GNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRH 282
+ D+Q+ E TN VY+ NL ++ L
Sbjct: 175 -SRRDRQAELGARAKEFTN-----------------------VYIKNLGEDMDDERLQGL 210
Query: 283 FHSLGAGVIEEVRVQ---RDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGS 339
F G + +V + KGFGFV + H +A A+ N L GKQ+
Sbjct: 211 FSKFGPALSVKVMTDESGKSKGFGFVSFERHEDARKAVDEMNGKD---LNGKQIYVGRAQ 267
Query: 340 K 340
K
Sbjct: 268 K 268
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/290 (27%), Positives = 131/290 (45%), Gaps = 35/290 (12%)
Query: 52 DPSTCRS----VYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRR 105
DPS +S ++V N+ + L + FS+ G + CK++ + S YGF+H+ +
Sbjct: 90 DPSLRKSGVGNIFVKNLDRSIDSKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQE 149
Query: 106 SAAMAILSLNGRHLFGQPIKVNWAYASGQREDTSG-----HFNIFVGDLSPEVTDATLFA 160
A AI +NG L + + V + R+ G N+++ +L ++ D L
Sbjct: 150 EAERAIEKMNGMFLNDRKVFVGRFKSRRDRQAELGARAKEFTNVYIKNLGEDMDDERLQG 209
Query: 161 CFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATK 220
FS + +VM D+ +G+S+GFGFVSF +DA+ A++++ GK L +QI A
Sbjct: 210 LFSKFGPALSVKVMTDE-SGKSKGFGFVSFERHEDARKAVDEMNGKDLNGKQIYVGRAQ- 267
Query: 221 GAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTV-------YVGNLAPE 273
K V T + G+ + E PQ +V YV NL
Sbjct: 268 -------------KKVERQTELKHKFGQMKQDKHKVEQVPQDISVRCQGVNLYVKNLDDG 314
Query: 274 VTQLDLHRHFHSLGAGVIEEVRVQ--RDKGFGFVRYSTHAEAALAIQMGN 321
+ L + F G +V ++ R KGFGFV +S+ EA A+ N
Sbjct: 315 IDDERLRKEFSPFGTITSAKVTMEGGRSKGFGFVCFSSPEEATKAVTEMN 364
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 100/231 (43%), Gaps = 41/231 (17%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS---YGFIHYFDRRSAAMAILSL 114
+VY+ N+ + + LQ +FS GP K++ + +GF+ + A A+ +
Sbjct: 192 NVYIKNLGEDMDDERLQGLFSKFGPALSVKVMTDESGKSKGFGFVSFERHEDARKAVDEM 251
Query: 115 NGRHLFGQPIKVNWAYASGQREDTSGH-------------------------FNIFVGDL 149
NG+ L G+ I V A +R+ H N++V +L
Sbjct: 252 NGKDLNGKQIYVGRAQKKVERQTELKHKFGQMKQDKHKVEQVPQDISVRCQGVNLYVKNL 311
Query: 150 SPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLG 209
+ D L FS + + + A+V + GRS+GFGFV F + ++A A+ ++ G+ +
Sbjct: 312 DDGIDDERLRKEFSPFGTITSAKVTME--GGRSKGFGFVCFSSPEEATKAVTEMNGRIVA 369
Query: 210 SRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNP 260
++ + A + E++Q+ L+N + T+ +P NP
Sbjct: 370 TKPLYVALAQR----KEERQA-------HLSNQYMQRMASTSAVSSPVINP 409
>gi|301756358|ref|XP_002914026.1| PREDICTED: polyadenylate-binding protein 1-like [Ailuropoda
melanoleuca]
Length = 636
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 81/296 (27%), Positives = 137/296 (46%), Gaps = 52/296 (17%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS-----YGFIHYFDRRSAAMAIL 112
S+YVG++H VTE +L E FS GP+ ++ R DK + Y +++Y R + A+
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRICR-DKITRRSLGYAYVNYQQPRDSERALD 70
Query: 113 SLNGRHLFGQPIKVNWAYASGQREDT---SGHFNIFVGDLSPEVTDATLFACFSVYPSCS 169
++N + G+P+++ W+ QR+ + SG NIF+ +L + + L+ FS + +
Sbjct: 71 TMNFDVIKGKPVRIMWS----QRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNIL 126
Query: 170 DARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQ 229
+V+ D+ S+G+GFV F Q+ A+ AI + G L R++ G + ++
Sbjct: 127 SCKVVCDENG--SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFV-------GRFKSRK 177
Query: 230 SSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAG 289
+A EL + E +T VY+ N ++ L F G
Sbjct: 178 EREA----ELGARAKE----------------FTNVYIKNFGEDMDDERLKDLFGKFGPA 217
Query: 290 VIEEVRVQRD-----KGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSK 340
+ V+V D KGFGFV + H +A A+ N + L GKQ+ K
Sbjct: 218 L--SVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKE---LNGKQIYVGRAQK 268
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 78/283 (27%), Positives = 131/283 (46%), Gaps = 31/283 (10%)
Query: 52 DPSTCRS----VYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRR 105
DPS +S +++ N+ + L + FS+ G + CK++ + S YGF+H+ +
Sbjct: 90 DPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQE 149
Query: 106 SAAMAILSLNGRHLFGQPIKVNWAYASGQREDTSG-----HFNIFVGDLSPEVTDATLFA 160
+A AI +NG L + + V + +RE G N+++ + ++ D L
Sbjct: 150 AAERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKD 209
Query: 161 CFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATK 220
F + +VM D+ +G+S+GFGFVSF +DAQ A++++ GK L +QI A K
Sbjct: 210 LFGKFGPALSVKVMTDE-SGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQK 268
Query: 221 GAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLH 280
++Q+ + E K+ T Q +YV NL + L
Sbjct: 269 KV----ERQTELKRKF--------EQMKQDRITRY-----QGVNLYVKNLDDGIDDERLR 311
Query: 281 RHFHSLGAGVIEEVRVQ--RDKGFGFVRYSTHAEAALAIQMGN 321
+ F G +V ++ R KGFGFV +S+ EA A+ N
Sbjct: 312 KEFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMN 354
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 86/181 (47%), Gaps = 20/181 (11%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS---YGFIHYFDRRSAAMAILSL 114
+VY+ N + + L+++F GP K++ + +GF+ + A A+ +
Sbjct: 192 NVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEM 251
Query: 115 NGRHLFGQPIKVNWAYASGQRE------------DTSGHF---NIFVGDLSPEVTDATLF 159
NG+ L G+ I V A +R+ D + N++V +L + D L
Sbjct: 252 NGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLR 311
Query: 160 ACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT 219
FS + + + A+VM + GRS+GFGFV F + ++A A+ ++ G+ + ++ + A
Sbjct: 312 KEFSPFGTITSAKVMME--GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQ 369
Query: 220 K 220
+
Sbjct: 370 R 370
>gi|363755816|ref|XP_003648124.1| hypothetical protein Ecym_8010 [Eremothecium cymbalariae
DBVPG#7215]
gi|356891324|gb|AET41307.1| Hypothetical protein Ecym_8010 [Eremothecium cymbalariae
DBVPG#7215]
Length = 602
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 93/319 (29%), Positives = 154/319 (48%), Gaps = 46/319 (14%)
Query: 54 STCRSVYVGNIHTQVTEPLLQEVFSSTG-PVEGCKLIRK----DKSSYGFIHYFDRRSAA 108
+T +Y+G++ TE +++++++ G P KLI+ + S Y F+ + SA
Sbjct: 50 TTSTQLYMGDLDASWTENDIKQIWATLGEPNVQVKLIKNSGPMNNSGYCFVEFPSNLSAT 109
Query: 109 MAILSLNGRHLFGQP---IKVNWA-YASGQREDTSGHFNIFVGDLSPEVTDATLFACF-S 163
A+L G + P +K+NWA +A+ + F+IFVGDL+P V+++ LF F S
Sbjct: 110 NALLK-TGLPIPVDPSRSLKLNWASFATAPGTE----FSIFVGDLAPNVSESQLFELFIS 164
Query: 164 VYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAG 223
Y S +A++++DQ TG S+G+GFV F N+ + Q ++ ++ G +L R IR + +K
Sbjct: 165 RYSSTLNAKIVFDQVTGVSKGYGFVKFGNEAEQQRSLVEMQGVFLNGRAIRVSTTSKNKS 224
Query: 224 NNEDKQSSDAKSVVELTNGSSEDGKE-TTNTEAPENNPQ--------------------- 261
S S T G T +P+ PQ
Sbjct: 225 RFRGGLSGTVTSAAAATAGPPVGNLSGVIQTSSPQTLPQQSQFIYPVQQQPVLSQFTDPN 284
Query: 262 YTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRY--STHAEAALAIQM 319
TTV++G L+ VT+ +L +F G I V++ KG GFV+Y + AE A+A
Sbjct: 285 NTTVFIGGLSSLVTEEELRAYFQPFGQ--IVYVKIPVGKGCGFVQYVDRSSAENAIAKMQ 342
Query: 320 GNTTQSSYLFGKQMKCSWG 338
G +S +++ SWG
Sbjct: 343 GFPIGNS-----RIRLSWG 356
Score = 38.5 bits (88), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 41/83 (49%), Gaps = 3/83 (3%)
Query: 52 DPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSSYGFIHYFDRRSAAMAI 111
DP+ +V++G + + VTE L+ F G + K+ GF+ Y DR SA AI
Sbjct: 282 DPNNT-TVFIGGLSSLVTEEELRAYFQPFGQIVYVKI--PVGKGCGFVQYVDRSSAENAI 338
Query: 112 LSLNGRHLFGQPIKVNWAYASGQ 134
+ G + I+++W ++ Q
Sbjct: 339 AKMQGFPIGNSRIRLSWGRSAKQ 361
>gi|326519747|dbj|BAK00246.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 368
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 66/200 (33%), Positives = 106/200 (53%), Gaps = 10/200 (5%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS-----YGFIHYFDRRSAAMAIL 112
+ YVGN+ QV+E LL E+F GPV + KD+ + YGF+ + A AI
Sbjct: 26 TTYVGNLDPQVSEELLWELFVQAGPVVNV-YVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
Query: 113 SLNGRHLFGQPIKVNWAYASGQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPS-CSDA 171
LN L+G+PI+VN A + D N+F+G+L PEV + L+ FS + ++
Sbjct: 85 ILNMLKLYGKPIRVNKASQDKKSLDVGA--NLFIGNLDPEVDEKLLYDTFSAFGVIVTNP 142
Query: 172 RVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSS 231
++M D +TG SRGFGFVS+ + + + AI + + L +R I ++A K E + +
Sbjct: 143 KIMRDPETGNSRGFGFVSYDSFESSDQAIEAMNNQHLCNRPITVSYAYKKDTKGE-RHGT 201
Query: 232 DAKSVVELTNGSSEDGKETT 251
A+ ++ N S+ + T
Sbjct: 202 PAERLLAANNPGSQKHRPHT 221
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 90/202 (44%), Gaps = 44/202 (21%)
Query: 145 FVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLT 204
+VG+L P+V++ L+ F + V D+ T +G+GFV FR+++DA AI L
Sbjct: 28 YVGNLDPQVSEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKILN 87
Query: 205 GKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTT 264
L + IR N A+ +DK+S D +
Sbjct: 88 MLKLYGKPIRVNKAS------QDKKSLDVGA----------------------------N 113
Query: 265 VYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRD------KGFGFVRYSTHAEAALAIQ 318
+++GNL PEV + L+ F + G ++ ++ RD +GFGFV Y + + AI+
Sbjct: 114 LFIGNLDPEVDEKLLYDTFSAFGV-IVTNPKIMRDPETGNSRGFGFVSYDSFESSDQAIE 172
Query: 319 MGNTTQSSYLFGKQMKCSWGSK 340
N + +L + + S+ K
Sbjct: 173 AMN---NQHLCNRPITVSYAYK 191
Score = 42.4 bits (98), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 47/86 (54%), Gaps = 11/86 (12%)
Query: 261 QYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDK------GFGFVRYSTHAEAA 314
Q T YVGNL P+V++ L F + AG + V V +D+ G+GFV + + +A
Sbjct: 23 QDATTYVGNLDPQVSEELLWELF--VQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDAD 80
Query: 315 LAIQMGNTTQSSYLFGKQMKCSWGSK 340
AI++ N + L+GK ++ + S+
Sbjct: 81 YAIKILNMLK---LYGKPIRVNKASQ 103
>gi|193787802|dbj|BAG53005.1| unnamed protein product [Homo sapiens]
Length = 636
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/283 (27%), Positives = 132/283 (46%), Gaps = 31/283 (10%)
Query: 52 DPSTCRS----VYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRR 105
DPS +S +++ N+ + L + FS+ G + CK++ + S YGF+H+ +
Sbjct: 90 DPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQE 149
Query: 106 SAAMAILSLNGRHLFGQPIKVNWAYASGQREDTSG-----HFNIFVGDLSPEVTDATLFA 160
+A AI +NG L + + V + +RE G N+++ + ++ D L
Sbjct: 150 AAERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKD 209
Query: 161 CFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATK 220
F + + +VM D+ +G+S+GFGFVSF +DAQ A++++ GK L +QI A K
Sbjct: 210 LFGKFGAALSVKVMTDE-SGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQK 268
Query: 221 GAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLH 280
++Q+ + E K+ T Q +YV NL + L
Sbjct: 269 KV----ERQTELKRKF--------EQMKQDRITRY-----QGVNLYVKNLDDGINDERLR 311
Query: 281 RHFHSLGAGVIEEVRVQ--RDKGFGFVRYSTHAEAALAIQMGN 321
+ F G +V ++ R KGFGFV +S+ EA A+ N
Sbjct: 312 KEFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMN 354
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 79/295 (26%), Positives = 135/295 (45%), Gaps = 50/295 (16%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIR----KDKSSYGFIHYFDRRSAAMAILS 113
S+YVG++H VTE +L E FS GP+ ++ R + Y ++++ A A+ +
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 114 LNGRHLFGQPIKVNWAYASGQREDT---SGHFNIFVGDLSPEVTDATLFACFSVYPSCSD 170
+N + G+P+++ W+ QR+ + SG NIF+ +L + + L+ FS + +
Sbjct: 72 MNFDVIKGKPVRIMWS----QRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 171 ARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQS 230
+V+ D+ S+G+GFV F Q+ A+ AI + G L R++ G + ++
Sbjct: 128 CKVVCDENG--SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFV-------GRFKSRKE 178
Query: 231 SDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGV 290
+A EL + E +T VY+ N ++ L F GA +
Sbjct: 179 REA----ELGARAKE----------------FTNVYIKNFGEDMDDERLKDLFGKFGAAL 218
Query: 291 IEEVRVQRD-----KGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSK 340
V+V D KGFGFV + H +A A+ N + L GKQ+ K
Sbjct: 219 --SVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKE---LNGKQIYVGRAQK 268
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 85/181 (46%), Gaps = 20/181 (11%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS---YGFIHYFDRRSAAMAILSL 114
+VY+ N + + L+++F G K++ + +GF+ + A A+ +
Sbjct: 192 NVYIKNFGEDMDDERLKDLFGKFGAALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEM 251
Query: 115 NGRHLFGQPIKVNWAYASGQRE------------DTSGHF---NIFVGDLSPEVTDATLF 159
NG+ L G+ I V A +R+ D + N++V +L + D L
Sbjct: 252 NGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGINDERLR 311
Query: 160 ACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT 219
FS + + + A+VM + GRS+GFGFV F + ++A A+ ++ G+ + ++ + A
Sbjct: 312 KEFSPFGTITSAKVMME--GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQ 369
Query: 220 K 220
+
Sbjct: 370 R 370
>gi|126342235|ref|XP_001367420.1| PREDICTED: polyadenylate-binding protein 1-like [Monodelphis
domestica]
Length = 635
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/295 (26%), Positives = 138/295 (46%), Gaps = 50/295 (16%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIR----KDKSSYGFIHYFDRRSAAMAILS 113
S+YVG++H +V+E +L E FS GP+ ++ R + Y ++++ A A+ +
Sbjct: 12 SLYVGDLHPEVSEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALET 71
Query: 114 LNGRHLFGQPIKVNWAYASGQREDT---SGHFNIFVGDLSPEVTDATLFACFSVYPSCSD 170
+N + G+P+++ W+ QR+ + SG NIF+ +L + + LF FS + +
Sbjct: 72 MNFDVIKGKPVRIMWS----QRDPSLRKSGVGNIFIKNLDKSIDNKALFDTFSAFGNILS 127
Query: 171 ARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQS 230
+V+ D+ S+G+GFV F + A+ AI+ + G L R++ G + ++
Sbjct: 128 CKVVCDEHG--SKGYGFVHFETRDAAERAIDKMNGMLLNDRKVFV-------GRFKSRKE 178
Query: 231 SDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGV 290
+A EL + E +T VY+ N ++ L L R F G +
Sbjct: 179 REA----ELGARAKE----------------FTNVYIKNFGEDMDDLRLKRLFGKFGPSL 218
Query: 291 IEEVRVQRD-----KGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSK 340
V+V D KGFGFV + H +A A++ N + L GK++ K
Sbjct: 219 --SVKVMTDESGTSKGFGFVNFERHEDAQKAVEEMNGKE---LNGKKIYVGRAQK 268
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 131/283 (46%), Gaps = 31/283 (10%)
Query: 52 DPSTCRS----VYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRR 105
DPS +S +++ N+ + L + FS+ G + CK++ + S YGF+H+ R
Sbjct: 90 DPSLRKSGVGNIFIKNLDKSIDNKALFDTFSAFGNILSCKVVCDEHGSKGYGFVHFETRD 149
Query: 106 SAAMAILSLNGRHLFGQPIKVNWAYASGQREDTSG-----HFNIFVGDLSPEVTDATLFA 160
+A AI +NG L + + V + +RE G N+++ + ++ D L
Sbjct: 150 AAERAIDKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDLRLKR 209
Query: 161 CFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATK 220
F + +VM D+ +G S+GFGFV+F +DAQ A+ ++ GK L ++I A K
Sbjct: 210 LFGKFGPSLSVKVMTDE-SGTSKGFGFVNFERHEDAQKAVEEMNGKELNGKKIYVGRAQK 268
Query: 221 GAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLH 280
++Q+ + +L K+ T Q +YV NL + L
Sbjct: 269 KG----ERQTELKRKFEQL--------KQDRITRY-----QGVNLYVKNLDDGIDDERLR 311
Query: 281 RHFHSLGAGVIEEVRVQ--RDKGFGFVRYSTHAEAALAIQMGN 321
+ F G +V ++ R+KGFGFV +S+ EA A+ N
Sbjct: 312 KEFSPFGTITSAKVMMEGGRNKGFGFVCFSSPEEATKAVTEMN 354
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 88/181 (48%), Gaps = 20/181 (11%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS---YGFIHYFDRRSAAMAILSL 114
+VY+ N + + L+ +F GP K++ + + +GF+++ A A+ +
Sbjct: 192 NVYIKNFGEDMDDLRLKRLFGKFGPSLSVKVMTDESGTSKGFGFVNFERHEDAQKAVEEM 251
Query: 115 NGRHLFGQPIKVNWAYASGQRE------------DTSGHF---NIFVGDLSPEVTDATLF 159
NG+ L G+ I V A G+R+ D + N++V +L + D L
Sbjct: 252 NGKELNGKKIYVGRAQKKGERQTELKRKFEQLKQDRITRYQGVNLYVKNLDDGIDDERLR 311
Query: 160 ACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT 219
FS + + + A+VM + GR++GFGFV F + ++A A+ ++ G+ + ++ + A
Sbjct: 312 KEFSPFGTITSAKVMME--GGRNKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYIALAQ 369
Query: 220 K 220
+
Sbjct: 370 R 370
>gi|308081546|ref|NP_001183096.1| uncharacterized protein LOC100501457 [Zea mays]
gi|238009292|gb|ACR35681.1| unknown [Zea mays]
gi|414871228|tpg|DAA49785.1| TPA: hypothetical protein ZEAMMB73_160597 [Zea mays]
Length = 359
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 65/200 (32%), Positives = 106/200 (53%), Gaps = 10/200 (5%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS-----YGFIHYFDRRSAAMAIL 112
+ YVGN+ QV+E LL E+F GPV + KD+ + YGF+ + A AI
Sbjct: 26 TTYVGNLDPQVSEELLWELFVQAGPVVNV-YVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
Query: 113 SLNGRHLFGQPIKVNWAYASGQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPS-CSDA 171
LN L+G+PI+VN A + D N+F+G+L P+V + L+ FS + ++
Sbjct: 85 ILNMIKLYGKPIRVNKASQDKKSLDVGA--NLFIGNLDPDVDEKLLYDTFSAFGVIVTNP 142
Query: 172 RVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSS 231
++M D +TG SRGFGFVS+ + + + AI + + L +R I ++A K E + +
Sbjct: 143 KIMRDPETGNSRGFGFVSYESFESSDQAIEAMNNQHLCNRPITVSYAYKKDTKGE-RHGT 201
Query: 232 DAKSVVELTNGSSEDGKETT 251
A+ ++ N S+ + T
Sbjct: 202 PAERLLASNNPGSQKNRPHT 221
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 90/202 (44%), Gaps = 44/202 (21%)
Query: 145 FVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLT 204
+VG+L P+V++ L+ F + V D+ T +G+GFV FR+++DA AI L
Sbjct: 28 YVGNLDPQVSEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKILN 87
Query: 205 GKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTT 264
L + IR N A+ +DK+S D +
Sbjct: 88 MIKLYGKPIRVNKAS------QDKKSLDVGA----------------------------N 113
Query: 265 VYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRD------KGFGFVRYSTHAEAALAIQ 318
+++GNL P+V + L+ F + G ++ ++ RD +GFGFV Y + + AI+
Sbjct: 114 LFIGNLDPDVDEKLLYDTFSAFGV-IVTNPKIMRDPETGNSRGFGFVSYESFESSDQAIE 172
Query: 319 MGNTTQSSYLFGKQMKCSWGSK 340
N + +L + + S+ K
Sbjct: 173 AMN---NQHLCNRPITVSYAYK 191
Score = 43.1 bits (100), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 47/86 (54%), Gaps = 11/86 (12%)
Query: 261 QYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDK------GFGFVRYSTHAEAA 314
Q T YVGNL P+V++ L F + AG + V V +D+ G+GFV + + +A
Sbjct: 23 QDATTYVGNLDPQVSEELLWELF--VQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDAD 80
Query: 315 LAIQMGNTTQSSYLFGKQMKCSWGSK 340
AI++ N + L+GK ++ + S+
Sbjct: 81 YAIKILNMIK---LYGKPIRVNKASQ 103
>gi|13540314|gb|AAK29408.1|AF338225_1 embryonic poly(A) binding protein [Xenopus laevis]
Length = 629
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 81/284 (28%), Positives = 132/284 (46%), Gaps = 31/284 (10%)
Query: 49 PGFDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRRS 106
PG S +V++ N+ + L + FS+ G + CK++ + S YGF+H+ +
Sbjct: 91 PGLRKSGVGNVFIKNLDESIDNKALYDTFSAFGNILSCKVVCDEHGSRGYGFVHFETHEA 150
Query: 107 AAMAILSLNGRHLFGQPIKVNWAYASGQREDTSG-----HFNIFVGDLSPEVTDATLFAC 161
A AI ++NG L + + V + +RE G N+++ + ++ D L
Sbjct: 151 ANRAIQTMNGMLLNDRKVFVGHFKSRRERELEYGAKVMEFTNVYIKNFGEDMDDKRLREI 210
Query: 162 FSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKG 221
FS + + +VM D +GRSRGFGFV++ N ++AQ A++++ GK + R I A K
Sbjct: 211 FSAFGNTLSVKVMMDD-SGRSRGFGFVNYGNHEEAQKAVSEMNGKEVNGRMIYVGRAQKR 269
Query: 222 AGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHR 281
++QS EL + +E N Q +YV NL + L +
Sbjct: 270 I----ERQS-------ELKRKFEQIKQERINRY------QGVNLYVKNLDDGIDDDRLRK 312
Query: 282 HFHSLGAGVIEEVRVQRD----KGFGFVRYSTHAEAALAIQMGN 321
F L G I +V + KGFGFV +S+ EA A+ N
Sbjct: 313 EF--LPYGTITSAKVMTEGGHSKGFGFVCFSSPEEATKAVTEMN 354
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 124/272 (45%), Gaps = 39/272 (14%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIR----KDKSSYGFIHYFDRRSAAMAILS 113
S+Y+G++H VTE +L E FS GP+ ++ R + SY +I++ A A+ +
Sbjct: 12 SLYIGDLHPDVTEAMLYEKFSPAGPIMSIRVCRDIATRRSLSYAYINFQQPADAERALDT 71
Query: 114 LNGRHLFGQPIKVNWAYAS-GQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDAR 172
+N + G+PI++ W+ G R+ SG N+F+ +L + + L+ FS + + +
Sbjct: 72 MNFEVIKGRPIRIMWSQRDPGLRK--SGVGNVFIKNLDESIDNKALYDTFSAFGNILSCK 129
Query: 173 VMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSSD 232
V+ D+ SRG+GFV F + A AI + G L R++ + E +
Sbjct: 130 VVCDEHG--SRGYGFVHFETHEAANRAIQTMNGMLLNDRKV---FVGHFKSRRERELEYG 184
Query: 233 AKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIE 292
AK V+E TN VY+ N ++ L F + G +
Sbjct: 185 AK-VMEFTN-----------------------VYIKNFGEDMDDKRLREIFSAFGNTLSV 220
Query: 293 EVRVQ---RDKGFGFVRYSTHAEAALAIQMGN 321
+V + R +GFGFV Y H EA A+ N
Sbjct: 221 KVMMDDSGRSRGFGFVNYGNHEEAQKAVSEMN 252
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 85/181 (46%), Gaps = 20/181 (11%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS---YGFIHYFDRRSAAMAILSL 114
+VY+ N + + L+E+FS+ G K++ D +GF++Y + A A+ +
Sbjct: 192 NVYIKNFGEDMDDKRLREIFSAFGNTLSVKVMMDDSGRSRGFGFVNYGNHEEAQKAVSEM 251
Query: 115 NGRHLFGQPIKVNWAYASGQREDTSGH---------------FNIFVGDLSPEVTDATLF 159
NG+ + G+ I V A +R+ N++V +L + D L
Sbjct: 252 NGKEVNGRMIYVGRAQKRIERQSELKRKFEQIKQERINRYQGVNLYVKNLDDGIDDDRLR 311
Query: 160 ACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT 219
F Y + + A+VM + G S+GFGFV F + ++A A+ ++ G+ + ++ + A
Sbjct: 312 KEFLPYGTITSAKVMTE--GGHSKGFGFVCFSSPEEATKAVTEMNGRIVSTKPLYVALAQ 369
Query: 220 K 220
+
Sbjct: 370 R 370
>gi|145349140|ref|XP_001418998.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144579228|gb|ABO97291.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 572
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 86/274 (31%), Positives = 130/274 (47%), Gaps = 51/274 (18%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCK----LIRKDKSSYGFIHYFDRRSAAMAILS 113
S+YVG++ T VTE L E FSS GPV + LI + Y ++++ AA AI
Sbjct: 38 SLYVGDLETSVTEAQLYEKFSSIGPVVSIRVCRDLITRRSLGYAYVNFQSPNDAAHAIDV 97
Query: 114 LNGRHLFGQPIKVNWAYASGQREDT---SGHFNIFVGDLSPEVTDATLFACFSVYPSCSD 170
LN + + G+PI+V ++ QR+ SG NIF+ +L + + L F+ + + +
Sbjct: 98 LNFQVINGKPIRVLYS----QRDPAVRRSGVGNIFIKNLDKAIDNKALLDTFAQFGTITS 153
Query: 171 ARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQS 230
A+V D + G S+G+GFV F Q+ AQ+AI+++ G L +Q+
Sbjct: 154 AKVAMDGQ-GNSKGYGFVQFETQEAAQAAIDNVNGMELNDKQVYV--------------- 197
Query: 231 SDAKSVVELTNGSSEDGKETTNT-EAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAG 289
G + E +NT EA NN VYV NL+ ++ L F GA
Sbjct: 198 -----------GPFQRRAERSNTGEAKFNN-----VYVKNLSENLSDEKLREKFAEHGA- 240
Query: 290 VIEEVRVQRD-----KGFGFVRYSTHAEAALAIQ 318
+ + RD KGFGFV Y AA A++
Sbjct: 241 -VTSCVIMRDEEGKSKGFGFVCYEEPEGAAAAVE 273
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 67/280 (23%), Positives = 121/280 (43%), Gaps = 34/280 (12%)
Query: 52 DPSTCRS----VYVGNIHTQVTEPLLQEVFSSTGPVEGCKLI---RKDKSSYGFIHYFDR 104
DP+ RS +++ N+ + L + F+ G + K+ + + YGF+ + +
Sbjct: 116 DPAVRRSGVGNIFIKNLDKAIDNKALLDTFAQFGTITSAKVAMDGQGNSKGYGFVQFETQ 175
Query: 105 RSAAMAILSLNGRHLFGQPIKVNWAYASGQREDT-SGHF-NIFVGDLSPEVTDATLFACF 162
+A AI ++NG L + + V +R +T F N++V +LS ++D L F
Sbjct: 176 EAAQAAIDNVNGMELNDKQVYVGPFQRRAERSNTGEAKFNNVYVKNLSENLSDEKLREKF 235
Query: 163 SVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGA 222
+ + + + +M D++ G+S+GFGFV + + A +A+ L G + W A
Sbjct: 236 AEHGAVTSCVIMRDEE-GKSKGFGFVCYEEPEGAAAAVEKLDGYTEDEK----TWVVCRA 290
Query: 223 GNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRH 282
++++ EL ++ +E A N +Y+ NL L
Sbjct: 291 QKKAEREA-------ELKAKFDQERRERMEKMAGAN------LYIKNLEDGTDDEKLREL 337
Query: 283 FHSLGAGVIEEVRVQRD-----KGFGFVRYSTHAEAALAI 317
F G I RV RD +G FV +S+ EA A+
Sbjct: 338 FKEF--GTITSCRVMRDASGVSRGSAFVAFSSPDEATRAV 375
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 84/181 (46%), Gaps = 19/181 (10%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS---YGFIHYFDRRSAAMAILSL 114
+VYV N+ +++ L+E F+ G V C ++R ++ +GF+ Y + AA A+ L
Sbjct: 216 NVYVKNLSENLSDEKLREKFAEHGAVTSCVIMRDEEGKSKGFGFVCYEEPEGAAAAVEKL 275
Query: 115 NGRHLFGQPIKVNWAYASGQRE-DTSGHF--------------NIFVGDLSPEVTDATLF 159
+G + V A +RE + F N+++ +L D L
Sbjct: 276 DGYTEDEKTWVVCRAQKKAEREAELKAKFDQERRERMEKMAGANLYIKNLEDGTDDEKLR 335
Query: 160 ACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT 219
F + + + RVM D +G SRG FV+F + +A A+ ++ GK +G++ + A
Sbjct: 336 ELFKEFGTITSCRVMRD-ASGVSRGSAFVAFSSPDEATRAVTEMNGKMVGAKPLYVALAQ 394
Query: 220 K 220
+
Sbjct: 395 R 395
>gi|402901594|ref|XP_003913731.1| PREDICTED: polyadenylate-binding protein 1-like [Papio anubis]
Length = 636
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 80/283 (28%), Positives = 132/283 (46%), Gaps = 31/283 (10%)
Query: 52 DPSTCRS----VYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRR 105
DPS RS ++V N+ + +L + S+ G + CK++ + S YGF+H+
Sbjct: 90 DPSLRRSGVGNIFVKNLDKSINNKVLYDTVSAFGNILSCKVVCDENGSKGYGFVHFETHE 149
Query: 106 SAAMAILSLNGRHLFGQPIKVNWAYASGQREDTSG----HF-NIFVGDLSPEVTDATLFA 160
+A AI +NG L + + V + +RE G F N+++ + ++ D L
Sbjct: 150 AAERAIEKMNGTLLNDRKVFVGRFKSRKEREAELGAKVKEFPNVYIKNFGEDMDDERLKD 209
Query: 161 CFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATK 220
F + +VM D+ +G+S+GFGFVSF +DAQ A++++ GK L +QI A K
Sbjct: 210 LFGKFGPALSVKVMTDE-SGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQK 268
Query: 221 GAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLH 280
++Q+ + E K+ T Q +YV NL ++ L
Sbjct: 269 KV----ERQTELKRKF--------EQMKQDRITRY-----QVVNLYVKNLDDDIDDERLR 311
Query: 281 RHFHSLGAGVIEEVRVQ--RDKGFGFVRYSTHAEAALAIQMGN 321
+ F G +V ++ R KGFGFV +S+ EA A+ N
Sbjct: 312 KAFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMN 354
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 77/295 (26%), Positives = 134/295 (45%), Gaps = 50/295 (16%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIR----KDKSSYGFIHYFDRRSAAMAILS 113
S+YVG++H VTE +L E FS GP+ ++ R + SSY ++++ + A A+ +
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSRAGPILSIRVCRDVITRRSSSYAYVNFQHPKDAEHALDT 71
Query: 114 LNGRHLFGQPIKVNWAYASGQREDT---SGHFNIFVGDLSPEVTDATLFACFSVYPSCSD 170
+N + G+P+++ W+ QR+ + SG NIFV +L + + L+ S + +
Sbjct: 72 MNFDVIKGKPVRIMWS----QRDPSLRRSGVGNIFVKNLDKSINNKVLYDTVSAFGNILS 127
Query: 171 ARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQS 230
+V+ D+ S+G+GFV F + A+ AI + G L R++ G + ++
Sbjct: 128 CKVVCDENG--SKGYGFVHFETHEAAERAIEKMNGTLLNDRKV-------FVGRFKSRKE 178
Query: 231 SDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGV 290
+A E G + ++ VY+ N ++ L F G +
Sbjct: 179 REA-----------ELGAKVK---------EFPNVYIKNFGEDMDDERLKDLFGKFGPAL 218
Query: 291 IEEVRVQRD-----KGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSK 340
V+V D KGFGFV + H +A A+ N + L GKQ+ K
Sbjct: 219 --SVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKE---LNGKQIYVGRAQK 268
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 92/191 (48%), Gaps = 24/191 (12%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS---YGFIHYFDRRSAAMAILSL 114
+VY+ N + + L+++F GP K++ + +GF+ + A A+ +
Sbjct: 192 NVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEM 251
Query: 115 NGRHLFGQPIKVNWAYASGQRE------------DTSGHF---NIFVGDLSPEVTDATLF 159
NG+ L G+ I V A +R+ D + N++V +L ++ D L
Sbjct: 252 NGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQVVNLYVKNLDDDIDDERLR 311
Query: 160 ACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT 219
FS + + + A+VM + GRS+GFGFV F + ++A A+ ++ G+ + ++ + A
Sbjct: 312 KAFSPFGTITSAKVMME--GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQ 369
Query: 220 KGAGNNEDKQS 230
+ ED+Q+
Sbjct: 370 R----KEDRQA 376
>gi|335293857|ref|XP_003357073.1| PREDICTED: polyadenylate-binding protein 4-like [Sus scrofa]
Length = 370
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/276 (28%), Positives = 129/276 (46%), Gaps = 47/276 (17%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIR----KDKSSYGFIHYFDRRSAAMAILS 113
S+YVG++H VTE LL + FS+ GPV ++ R + Y ++++ A A+ +
Sbjct: 11 SLYVGDLHADVTEDLLFKKFSTVGPVLSIRICRDLVTRRSLGYAYVNFLQLADAQKALDT 70
Query: 114 LNGRHLFGQPIKVNWAYASGQRE---DTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSD 170
+N + G+ I++ W+ QR+ SG N+F+ +L + + TL+ FS +
Sbjct: 71 MNFDLIKGKSIRLMWS----QRDAYLRKSGIGNVFIKNLDKSIDNKTLYEHFSAFGKILS 126
Query: 171 ARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQS 230
++VM D + SRG+ FV F+NQ A AI ++ G L C N +D+++
Sbjct: 127 SKVMSDDQG--SRGYAFVHFQNQIAADRAIEEMNGALLKD----CRLFVGRFKNRKDREA 180
Query: 231 SDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGV 290
EL N ++E +T VY+ N ++ L F G +
Sbjct: 181 -------ELQNKANE----------------FTNVYIKNFGDDMDDERLKEVFSKYGKTL 217
Query: 291 IEEVRVQRD-----KGFGFVRYSTHAEAALAIQMGN 321
V+V RD KGFGFV + +H A A++ N
Sbjct: 218 --SVKVMRDSSGKSKGFGFVSFDSHEAAKKAVEEMN 251
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 125/271 (46%), Gaps = 31/271 (11%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRRSAAMAILSLN 115
+V++ N+ + L E FS+ G + K++ D+ S Y F+H+ ++ +A AI +N
Sbjct: 99 NVFIKNLDKSIDNKTLYEHFSAFGKILSSKVMSDDQGSRGYAFVHFQNQIAADRAIEEMN 158
Query: 116 GRHLFGQPIKVNWAYASGQRE----DTSGHF-NIFVGDLSPEVTDATLFACFSVYPSCSD 170
G L + V RE + + F N+++ + ++ D L FS Y
Sbjct: 159 GALLKDCRLFVGRFKNRKDREAELQNKANEFTNVYIKNFGDDMDDERLKEVFSKYGKTLS 218
Query: 171 ARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQS 230
+VM D +G+S+GFGFVSF + + A+ A+ ++ GK + + + A K A ++Q+
Sbjct: 219 VKVMRDS-SGKSKGFGFVSFDSHEAAKKAVEEMNGKDINGQLLFVGRAQKKA----ERQA 273
Query: 231 SDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGV 290
EL + +E Q +Y+ NL + L R F S G+
Sbjct: 274 -------ELKQMFEQLKRERF------RRCQGVKLYIKNLDETIDDEKLRREFSSFGS-- 318
Query: 291 IEEVRVQ----RDKGFGFVRYSTHAEAALAI 317
I V+V R KGFG + +S+ EA A+
Sbjct: 319 ISRVKVMQEEGRSKGFGLICFSSPEEATKAM 349
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 84/181 (46%), Gaps = 20/181 (11%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRK---DKSSYGFIHYFDRRSAAMAILSL 114
+VY+ N + + L+EVFS G K++R +GF+ + +A A+ +
Sbjct: 191 NVYIKNFGDDMDDERLKEVFSKYGKTLSVKVMRDSSGKSKGFGFVSFDSHEAAKKAVEEM 250
Query: 115 NGRHLFGQPIKVNWAYASGQREDTSGHF---------------NIFVGDLSPEVTDATLF 159
NG+ + GQ + V A +R+ +++ +L + D L
Sbjct: 251 NGKDINGQLLFVGRAQKKAERQAELKQMFEQLKRERFRRCQGVKLYIKNLDETIDDEKLR 310
Query: 160 ACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT 219
FS + S S +VM Q+ GRS+GFG + F + ++A A+ ++ G+ LGS+ + A
Sbjct: 311 REFSSFGSISRVKVM--QEEGRSKGFGLICFSSPEEATKAMTEMNGRILGSKPLNIALAQ 368
Query: 220 K 220
K
Sbjct: 369 K 369
>gi|327271804|ref|XP_003220677.1| PREDICTED: embryonic polyadenylate-binding protein-like [Anolis
carolinensis]
Length = 635
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 127/272 (46%), Gaps = 39/272 (14%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIR----KDKSSYGFIHYFDRRSAAMAILS 113
S+YVG++H VTE +L E FS GP+ ++ R + Y +I++ A A+ +
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPIMSIRVCRDVATRRSLGYAYINFQQPADAERALDT 71
Query: 114 LNGRHLFGQPIKVNWAYAS-GQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDAR 172
+N + G+PI++ W+ G R+ SG NIF+ +L + + L+ FS + + +
Sbjct: 72 MNFEVIKGRPIRIMWSQRDPGLRK--SGVGNIFIKNLDDSIDNKALYDTFSAFGNILSCK 129
Query: 173 VMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSSD 232
V+ D+ SRG+GFV F + A AI + G L R++ GN + ++ +
Sbjct: 130 VVCDENG--SRGYGFVHFETHEAANRAIATMNGMLLNDRKV-------FVGNFKSRRERE 180
Query: 233 AKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIE 292
A E G + ++T VY+ N E++ L F G +
Sbjct: 181 A-----------EYGAKAM---------EFTNVYIKNFGEEMSNERLQETFSIFGKTLSV 220
Query: 293 EV---RVQRDKGFGFVRYSTHAEAALAIQMGN 321
+V + R KGFGFV + H +A A++ N
Sbjct: 221 KVMTDNIGRSKGFGFVNFEKHQDAQKAVEDMN 252
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/282 (27%), Positives = 128/282 (45%), Gaps = 27/282 (9%)
Query: 49 PGFDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRRS 106
PG S ++++ N+ + L + FS+ G + CK++ + S YGF+H+ +
Sbjct: 91 PGLRKSGVGNIFIKNLDDSIDNKALYDTFSAFGNILSCKVVCDENGSRGYGFVHFETHEA 150
Query: 107 AAMAILSLNGRHLFGQPIKVNWAYASGQREDTSG-----HFNIFVGDLSPEVTDATLFAC 161
A AI ++NG L + + V + +RE G N+++ + E+++ L
Sbjct: 151 ANRAIATMNGMLLNDRKVFVGNFKSRREREAEYGAKAMEFTNVYIKNFGEEMSNERLQET 210
Query: 162 FSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKG 221
FS++ +VM D GRS+GFGFV+F QDAQ A+ D+ GK + R + A K
Sbjct: 211 FSIFGKTLSVKVMTDN-IGRSKGFGFVNFEKHQDAQKAVEDMNGKEINGRMLYVGRAQK- 268
Query: 222 AGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHR 281
++QS EL + +E + Q +YV NL + L +
Sbjct: 269 ---RMERQS-------ELKRKFEQIKQERVSRY------QGVNLYVKNLDDGIDDERLRK 312
Query: 282 HFHSLGAGVIEEVRVQ--RDKGFGFVRYSTHAEAALAIQMGN 321
F G +V + KGFGFV +S+ EA A+ N
Sbjct: 313 EFSPYGTITSAKVMTEGGHSKGFGFVCFSSPEEATKAVTEMN 354
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 87/181 (48%), Gaps = 20/181 (11%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKD---KSSYGFIHYFDRRSAAMAILSL 114
+VY+ N +++ LQE FS G K++ + +GF+++ + A A+ +
Sbjct: 192 NVYIKNFGEEMSNERLQETFSIFGKTLSVKVMTDNIGRSKGFGFVNFEKHQDAQKAVEDM 251
Query: 115 NGRHLFGQPIKVNWAYASGQR-------------EDTSGH--FNIFVGDLSPEVTDATLF 159
NG+ + G+ + V A +R E S + N++V +L + D L
Sbjct: 252 NGKEINGRMLYVGRAQKRMERQSELKRKFEQIKQERVSRYQGVNLYVKNLDDGIDDERLR 311
Query: 160 ACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT 219
FS Y + + A+VM + G S+GFGFV F + ++A A+ ++ G+ + ++ + A
Sbjct: 312 KEFSPYGTITSAKVMTE--GGHSKGFGFVCFSSPEEATKAVTEMNGRIVSTKPLYVALAQ 369
Query: 220 K 220
+
Sbjct: 370 R 370
>gi|148227542|ref|NP_001082094.1| embryonic polyadenylate-binding protein A [Xenopus laevis]
gi|94711253|sp|Q98SP8.2|EPABA_XENLA RecName: Full=Embryonic polyadenylate-binding protein A;
Short=Embryonic poly(A)-binding protein A; Short=ePAB-A;
Short=ePABP-A; AltName: Full=XePABP-A
gi|51258324|gb|AAH80020.1| EPAB protein [Xenopus laevis]
Length = 629
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 81/284 (28%), Positives = 132/284 (46%), Gaps = 31/284 (10%)
Query: 49 PGFDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRRS 106
PG S +V++ N+ + L + FS+ G + CK++ + S YGF+H+ +
Sbjct: 91 PGLRKSGVGNVFIKNLDESIDNKALYDTFSAFGNILSCKVVCDEHGSRGYGFVHFETHEA 150
Query: 107 AAMAILSLNGRHLFGQPIKVNWAYASGQREDTSG-----HFNIFVGDLSPEVTDATLFAC 161
A AI ++NG L + + V + +RE G N+++ + ++ D L
Sbjct: 151 ANRAIQTMNGMLLNDRKVFVGHFKSRRERELEYGAKVMEFTNVYIKNFGEDMDDKRLREI 210
Query: 162 FSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKG 221
FS + + +VM D +GRSRGFGFV++ N ++AQ A++++ GK + R I A K
Sbjct: 211 FSAFGNTLSVKVMMDD-SGRSRGFGFVNYGNHEEAQKAVSEMNGKEVNGRMIYVGRAQKR 269
Query: 222 AGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHR 281
++QS EL + +E N Q +YV NL + L +
Sbjct: 270 I----ERQS-------ELKRKFEQIKQERINRY------QGVNLYVKNLDDGIDDDRLRK 312
Query: 282 HFHSLGAGVIEEVRVQRD----KGFGFVRYSTHAEAALAIQMGN 321
F L G I +V + KGFGFV +S+ EA A+ N
Sbjct: 313 EF--LPYGTITSAKVMTEGGHSKGFGFVCFSSPEEATKAVTEMN 354
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 124/272 (45%), Gaps = 39/272 (14%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIR----KDKSSYGFIHYFDRRSAAMAILS 113
S+Y+G++H VTE +L E FS GP+ ++ R + SY +I++ A A+ +
Sbjct: 12 SLYIGDLHPDVTEAMLYEKFSPAGPIMSIRVCRDIATRRSLSYAYINFQQPADAERALDT 71
Query: 114 LNGRHLFGQPIKVNWAYAS-GQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDAR 172
+N + G+PI++ W+ G R+ SG N+F+ +L + + L+ FS + + +
Sbjct: 72 MNFEVIKGRPIRIMWSQRDPGLRK--SGVGNVFIKNLDESIDNKALYDTFSAFGNILSCK 129
Query: 173 VMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSSD 232
V+ D+ SRG+GFV F + A AI + G L R++ + E +
Sbjct: 130 VVCDEHG--SRGYGFVHFETHEAANRAIQTMNGMLLNDRKV---FVGHFKSRRERELEYG 184
Query: 233 AKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIE 292
AK V+E TN VY+ N ++ L F + G +
Sbjct: 185 AK-VMEFTN-----------------------VYIKNFGEDMDDKRLREIFSAFGNTLSV 220
Query: 293 EVRVQ---RDKGFGFVRYSTHAEAALAIQMGN 321
+V + R +GFGFV Y H EA A+ N
Sbjct: 221 KVMMDDSGRSRGFGFVNYGNHEEAQKAVSEMN 252
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 85/181 (46%), Gaps = 20/181 (11%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS---YGFIHYFDRRSAAMAILSL 114
+VY+ N + + L+E+FS+ G K++ D +GF++Y + A A+ +
Sbjct: 192 NVYIKNFGEDMDDKRLREIFSAFGNTLSVKVMMDDSGRSRGFGFVNYGNHEEAQKAVSEM 251
Query: 115 NGRHLFGQPIKVNWAYASGQREDTSGH---------------FNIFVGDLSPEVTDATLF 159
NG+ + G+ I V A +R+ N++V +L + D L
Sbjct: 252 NGKEVNGRMIYVGRAQKRIERQSELKRKFEQIKQERINRYQGVNLYVKNLDDGIDDDRLR 311
Query: 160 ACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT 219
F Y + + A+VM + G S+GFGFV F + ++A A+ ++ G+ + ++ + A
Sbjct: 312 KEFLPYGTITSAKVMTE--GGHSKGFGFVCFSSPEEATKAVTEMNGRIVSTKPLYVALAQ 369
Query: 220 K 220
+
Sbjct: 370 R 370
>gi|157818977|ref|NP_001099678.1| poly(A) binding protein, cytoplasmic 6 [Rattus norvegicus]
gi|149027506|gb|EDL83096.1| similar to RIKEN cDNA 4932702K14 (predicted) [Rattus norvegicus]
gi|197246058|gb|AAI68959.1| Poly(A) binding protein, cytoplasmic 3 [Rattus norvegicus]
Length = 643
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 84/303 (27%), Positives = 138/303 (45%), Gaps = 53/303 (17%)
Query: 52 DPS-TCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS-----YGFIHYFDRR 105
DPS + S+YVG++H VTE +L E FS GP+ ++ R D+++ Y +++
Sbjct: 5 DPSYSLASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVYR-DRTTRRSLGYASVNFQQLE 63
Query: 106 SAAMAILSLNGRHLFGQPIKVNWAYASGQREDT---SGHFNIFVGDLSPEVTDATLFACF 162
A A+ ++N + G+P+++ W+ QR+ + SG NIFV +L + TL+ F
Sbjct: 64 DAERALDTMNFDVIKGKPVRIMWS----QRDPSLRKSGVGNIFVKNLDRSIDSKTLYDTF 119
Query: 163 SVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGA 222
S + + +V+ D+ S+G+GFV F Q++A+ AI + G +L R++
Sbjct: 120 SAFGNILSCKVVCDENG--SKGYGFVHFETQEEAERAIEKMNGMFLNDRKVFVGRFK--- 174
Query: 223 GNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRH 282
+ D+Q+ E TN VY+ NL ++ L
Sbjct: 175 -SRRDRQAELGARAKEFTN-----------------------VYIKNLGEDMDDERLQDL 210
Query: 283 FHSLGAGVIEEVRVQRD-----KGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSW 337
F G + V+V D KGFGFV + H +A A+ N L GKQ+
Sbjct: 211 FSRFGPAL--SVKVMTDESGKSKGFGFVSFERHEDARKAVDEMNGKD---LNGKQIYVGR 265
Query: 338 GSK 340
K
Sbjct: 266 AQK 268
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 80/287 (27%), Positives = 136/287 (47%), Gaps = 29/287 (10%)
Query: 52 DPSTCRS----VYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRR 105
DPS +S ++V N+ + L + FS+ G + CK++ + S YGF+H+ +
Sbjct: 90 DPSLRKSGVGNIFVKNLDRSIDSKTLYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQE 149
Query: 106 SAAMAILSLNGRHLFGQPIKVNWAYASGQREDTSG-----HFNIFVGDLSPEVTDATLFA 160
A AI +NG L + + V + R+ G N+++ +L ++ D L
Sbjct: 150 EAERAIEKMNGMFLNDRKVFVGRFKSRRDRQAELGARAKEFTNVYIKNLGEDMDDERLQD 209
Query: 161 CFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATK 220
FS + +VM D+ +G+S+GFGFVSF +DA+ A++++ GK L +QI A K
Sbjct: 210 LFSRFGPALSVKVMTDE-SGKSKGFGFVSFERHEDARKAVDEMNGKDLNGKQIYVGRAQK 268
Query: 221 GAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTE-APENNP---QYTTVYVGNLAPEVTQ 276
++Q+ EL + + ++ E P++ Q +YV NL +
Sbjct: 269 KV----ERQT-------ELKHKFGQMKQDKPKIEQVPQDRSVRCQGVNLYVKNLDDGIDD 317
Query: 277 LDLHRHFHSLGAGVIEEVRVQ--RDKGFGFVRYSTHAEAALAIQMGN 321
L + F G +V ++ R KGFGFV +S+ EA A+ N
Sbjct: 318 ERLRKEFSPFGTITSAKVTMEGGRSKGFGFVCFSSPEEATKAVTEMN 364
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 86/191 (45%), Gaps = 30/191 (15%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS---YGFIHYFDRRSAAMAILSL 114
+VY+ N+ + + LQ++FS GP K++ + +GF+ + A A+ +
Sbjct: 192 NVYIKNLGEDMDDERLQDLFSRFGPALSVKVMTDESGKSKGFGFVSFERHEDARKAVDEM 251
Query: 115 NGRHLFGQPIKVNWAYASGQREDTSGH-------------------------FNIFVGDL 149
NG+ L G+ I V A +R+ H N++V +L
Sbjct: 252 NGKDLNGKQIYVGRAQKKVERQTELKHKFGQMKQDKPKIEQVPQDRSVRCQGVNLYVKNL 311
Query: 150 SPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLG 209
+ D L FS + + + A+V + GRS+GFGFV F + ++A A+ ++ G+ +
Sbjct: 312 DDGIDDERLRKEFSPFGTITSAKVTME--GGRSKGFGFVCFSSPEEATKAVTEMNGRIVA 369
Query: 210 SRQIRCNWATK 220
++ + A +
Sbjct: 370 TKPLYVALAQR 380
>gi|365765198|gb|EHN06710.1| Nam8p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 523
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 103/342 (30%), Positives = 163/342 (47%), Gaps = 65/342 (19%)
Query: 45 GNLPPGFDPSTCRSVYVG------NIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSSYGF 98
G+L P +D +T R ++ N+ L SS GP K+ Y F
Sbjct: 59 GDLDPTWDKNTVRQIWASLGEANINVRMMWNNTLNNXSRSSMGP--------KNNQGYCF 110
Query: 99 IHYFDRRSAAMAILSLNGRHLFGQP---IKVNWAYASGQRE-------DTSGHFNIFVGD 148
+ + AA A+L NG + P +K+NWA +S + + +IFVGD
Sbjct: 111 VDFPSSTHAANALLK-NGMLIPNFPNKKLKLNWATSSYSNSNNSLNNVKSGNNCSIFVGD 169
Query: 149 LSPEVTDATLFACF-SVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKW 207
L+P VT++ LF F + Y S S A+++ DQ TG S+G+GFV F N + Q A++++ G +
Sbjct: 170 LAPNVTESQLFELFINRYASTSHAKIVHDQVTGMSKGYGFVKFTNSDEQQLALSEMQGVF 229
Query: 208 LGSRQIRCNWATKG-----AGNNEDKQSS--------DAKSVVE----LTNGSSEDGKET 250
L R I+ T G +GNN+ +SS D++ + + L+NG++ G +
Sbjct: 230 LNGRAIKVG-PTSGQQQHVSGNNDYNRSSSSLNNENVDSRFLSKGQSFLSNGNNTMGFKR 288
Query: 251 TNT--------EAPENN----PQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQR 298
+ + P N P TTV++G L+ VT+ +L +F G I V++
Sbjct: 289 NHMSQFIYPVQQQPSLNHFTDPNNTTVFIGGLSSLVTEDELRAYFQPF--GTIVYVKIPV 346
Query: 299 DKGFGFVRYSTH--AEAALAIQMGNTTQSSYLFGKQMKCSWG 338
KG GFV+Y AEAA+A G +S +++ SWG
Sbjct: 347 GKGCGFVQYVDRLSAEAAIAGMQGFPIANS-----RVRLSWG 383
>gi|326511990|dbj|BAJ95976.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 530
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 128/281 (45%), Gaps = 35/281 (12%)
Query: 52 DPSTCRS----VYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKD---KSSYGFIHYFDR 104
DPS+ RS +++ N+ + L + FS+ G + CK+ D +GF+ Y
Sbjct: 201 DPSSRRSGSANIFIKNLDKTIDNKTLHDTFSAFGAILSCKVAMDDIGQSKGFGFVQYEKE 260
Query: 105 RSAAMAILSLNGRHLFGQPIKVNWAYASGQREDTSGHF---NIFVGDLSPEVTDATLFAC 161
SA A+ SLNG + +P+ V +R+++S N+FV +LS T L
Sbjct: 261 ESAQSAMKSLNGMLINDKPVYVGPFLRKQERDNSSDKAKFNNVFVKNLSESTTKEDLIKV 320
Query: 162 FSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKG 221
FS Y + + A VM G+SR FGFV+F + DA A+ +L GK + ++ W G
Sbjct: 321 FSEYGTITSAVVMIGM-DGKSRCFGFVNFESPDDAARAVEELNGKKINDKE----WYV-G 374
Query: 222 AGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHR 281
+ ++ D K E + + D + N +Y+ NL +T L
Sbjct: 375 RAQKKSEREMDLKRRFEQSMKDAADKYQGQN------------LYLKNLDDGITDDQLRE 422
Query: 282 HFHSLGAGVIEEVRVQRD-----KGFGFVRYSTHAEAALAI 317
F + G I ++ RD KG GFV +ST EA+ A+
Sbjct: 423 LFSNFGK--ITSCKIMRDQNGVSKGSGFVSFSTREEASQAL 461
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/278 (27%), Positives = 125/278 (44%), Gaps = 42/278 (15%)
Query: 53 PSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS----YGFIHYFDRRSAA 108
P S+YVG++ VT+ L E+FS G V ++ R S Y +++Y + AA
Sbjct: 118 PLPTTSLYVGDLEANVTDSQLYELFSQAGQVVSVRVCRDVNSRRSLGYAYVNYSNPMDAA 177
Query: 109 MAILSLNGRHLFGQPIKVNWAYA--SGQREDTSGHFNIFVGDLSPEVTDATLFACFSVYP 166
A+ +LN L +PI+V ++ S +R SG NIF+ +L + + TL FS +
Sbjct: 178 RAMEALNFAPLNNKPIRVMYSNRDPSSRR---SGSANIFIKNLDKTIDNKTLHDTFSAFG 234
Query: 167 SCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNE 226
+ +V D G+S+GFGFV + ++ AQSA+ L G + + + +
Sbjct: 235 AILSCKVAMDD-IGQSKGFGFVQYEKEESAQSAMKSLNGMLINDKPVYVGPFLR------ 287
Query: 227 DKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSL 286
KQ D S + ++ V+V NL+ T+ DL + F
Sbjct: 288 -KQERDNSS----------------------DKAKFNNVFVKNLSESTTKEDLIKVFSEY 324
Query: 287 GAGVIEEVRVQRD---KGFGFVRYSTHAEAALAIQMGN 321
G V + D + FGFV + + +AA A++ N
Sbjct: 325 GTITSAVVMIGMDGKSRCFGFVNFESPDDAARAVEELN 362
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 88/187 (47%), Gaps = 19/187 (10%)
Query: 52 DPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPV-EGCKLIRKDKSS--YGFIHYFDRRSAA 108
D + +V+V N+ T+ L +VFS G + +I D S +GF+++ AA
Sbjct: 296 DKAKFNNVFVKNLSESTTKEDLIKVFSEYGTITSAVVMIGMDGKSRCFGFVNFESPDDAA 355
Query: 109 MAILSLNGRHLFGQPIKVNWAYASGQRE-DTSGHF--------------NIFVGDLSPEV 153
A+ LNG+ + + V A +RE D F N+++ +L +
Sbjct: 356 RAVEELNGKKINDKEWYVGRAQKKSEREMDLKRRFEQSMKDAADKYQGQNLYLKNLDDGI 415
Query: 154 TDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQI 213
TD L FS + + ++M DQ G S+G GFVSF +++A A+ ++ GK + + +
Sbjct: 416 TDDQLRELFSNFGKITSCKIMRDQ-NGVSKGSGFVSFSTREEASQALTEMNGKMISGKPL 474
Query: 214 RCNWATK 220
+A +
Sbjct: 475 YVAFAQR 481
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 47/82 (57%), Gaps = 3/82 (3%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDK---SSYGFIHYFDRRSAAMAILSL 114
++Y+ N+ +T+ L+E+FS+ G + CK++R GF+ + R A+ A+ +
Sbjct: 405 NLYLKNLDDGITDDQLRELFSNFGKITSCKIMRDQNGVSKGSGFVSFSTREEASQALTEM 464
Query: 115 NGRHLFGQPIKVNWAYASGQRE 136
NG+ + G+P+ V +A +R+
Sbjct: 465 NGKMISGKPLYVAFAQRKEERK 486
>gi|115482332|ref|NP_001064759.1| Os10g0457000 [Oryza sativa Japonica Group]
gi|31432465|gb|AAP54095.1| Splicing factor 3B subunit 4, putative, expressed [Oryza sativa
Japonica Group]
gi|113639368|dbj|BAF26673.1| Os10g0457000 [Oryza sativa Japonica Group]
gi|215737182|dbj|BAG96111.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218184664|gb|EEC67091.1| hypothetical protein OsI_33883 [Oryza sativa Indica Group]
Length = 355
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/200 (32%), Positives = 106/200 (53%), Gaps = 10/200 (5%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS-----YGFIHYFDRRSAAMAIL 112
+ YVGN+ QV+E LL E+F GPV + KD+ + YGF+ + A AI
Sbjct: 26 TTYVGNLDPQVSEELLWELFVQAGPVVNV-YVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
Query: 113 SLNGRHLFGQPIKVNWAYASGQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPS-CSDA 171
LN L+G+PI+VN A + D N+F+G+L P+V + L+ FS + ++
Sbjct: 85 ILNMIKLYGKPIRVNKASQDKKSLDVGA--NLFIGNLDPDVDEKLLYDTFSAFGVIVTNP 142
Query: 172 RVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSS 231
++M D +TG SRGFGFVS+ + + + AI + + L +R I ++A K E + +
Sbjct: 143 KIMRDPETGNSRGFGFVSYDSFESSDQAIEAMNNQHLCNRPITVSYAYKKDTKGE-RHGT 201
Query: 232 DAKSVVELTNGSSEDGKETT 251
A+ ++ N S+ + T
Sbjct: 202 PAERLLAANNPGSQKNRPHT 221
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 90/202 (44%), Gaps = 44/202 (21%)
Query: 145 FVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLT 204
+VG+L P+V++ L+ F + V D+ T +G+GFV FR+++DA AI L
Sbjct: 28 YVGNLDPQVSEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKILN 87
Query: 205 GKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTT 264
L + IR N A+ +DK+S D +
Sbjct: 88 MIKLYGKPIRVNKAS------QDKKSLDVGA----------------------------N 113
Query: 265 VYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRD------KGFGFVRYSTHAEAALAIQ 318
+++GNL P+V + L+ F + G ++ ++ RD +GFGFV Y + + AI+
Sbjct: 114 LFIGNLDPDVDEKLLYDTFSAFGV-IVTNPKIMRDPETGNSRGFGFVSYDSFESSDQAIE 172
Query: 319 MGNTTQSSYLFGKQMKCSWGSK 340
N + +L + + S+ K
Sbjct: 173 AMN---NQHLCNRPITVSYAYK 191
Score = 43.1 bits (100), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 47/86 (54%), Gaps = 11/86 (12%)
Query: 261 QYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDK------GFGFVRYSTHAEAA 314
Q T YVGNL P+V++ L F + AG + V V +D+ G+GFV + + +A
Sbjct: 23 QDATTYVGNLDPQVSEELLWELF--VQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDAD 80
Query: 315 LAIQMGNTTQSSYLFGKQMKCSWGSK 340
AI++ N + L+GK ++ + S+
Sbjct: 81 YAIKILNMIK---LYGKPIRVNKASQ 103
>gi|312378306|gb|EFR24923.1| hypothetical protein AND_10202 [Anopheles darlingi]
Length = 645
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/289 (25%), Positives = 131/289 (45%), Gaps = 41/289 (14%)
Query: 47 LPPGFDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCK----LIRKDKSSYGFIHYF 102
+ PG S+YVG++H +TE L E FSS GPV + LI + Y ++++
Sbjct: 1 MNPGGPNYQMASLYVGDLHADITEATLFEKFSSAGPVLSIRVCRDLITRRSLGYAYVNFQ 60
Query: 103 DRRSAAMAILSLNGRHLFGQPIKVNWAYASGQREDT---SGHFNIFVGDLSPEVTDATLF 159
A A+ ++N + G+PI++ W+ QR+ + SG N+F+ +L ++ + ++
Sbjct: 61 QPADAERALDTMNFDTIKGRPIRIMWS----QRDPSLRKSGVGNVFIKNLDKKIDNKAMY 116
Query: 160 ACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT 219
FS + + +V D+K G+S+G+GFV F ++ A ++I + G L +++
Sbjct: 117 DTFSAFGNILSCKVAQDEK-GQSKGYGFVHFETEESANTSIEKVNGMLLNEKKVFVGRFI 175
Query: 220 KGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDL 279
++ E E +T VYV N ++T+ L
Sbjct: 176 ---------------------------SRKEREKELGEKAKLFTNVYVKNFGEDLTEEAL 208
Query: 280 HRHFHSLGAGVIEEVRVQ--RDKGFGFVRYSTHAEAALAIQMGNTTQSS 326
H F G+ V ++ + +GFGFV + A A+Q N + S
Sbjct: 209 HEMFEKYGSITSHRVMMKDGKSRGFGFVAFENPDAAERAVQELNAKELS 257
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 77/280 (27%), Positives = 124/280 (44%), Gaps = 32/280 (11%)
Query: 52 DPSTCRS----VYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDK---SSYGFIHYFDR 104
DPS +S V++ N+ ++ + + FS+ G + CK+ + +K YGF+H+
Sbjct: 90 DPSLRKSGVGNVFIKNLDKKIDNKAMYDTFSAFGNILSCKVAQDEKGQSKGYGFVHFETE 149
Query: 105 RSAAMAILSLNGRHLFGQPIKVNWAYASGQREDTSGH-----FNIFVGDLSPEVTDATLF 159
SA +I +NG L + + V + +RE G N++V + ++T+ L
Sbjct: 150 ESANTSIEKVNGMLLNEKKVFVGRFISRKEREKELGEKAKLFTNVYVKNFGEDLTEEALH 209
Query: 160 ACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT 219
F Y S + RVM K G+SRGFGFV+F N A+ A+ +L K L ++ +
Sbjct: 210 EMFEKYGSITSHRVMM--KDGKSRGFGFVAFENPDAAERAVQELNAKELSDGKVL--YVG 265
Query: 220 KGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDL 279
+ NE + +EL + E N +YV NL + L
Sbjct: 266 RAQKKNERQ--------MELKRRFEQLKMERLTRYHGVN------LYVKNLDDTIDDERL 311
Query: 280 HRHFHSLGAGVIEEVRVQ--RDKGFGFVRYSTHAEAALAI 317
+ F G +V + R KGFGFV +S EA A+
Sbjct: 312 RKEFAPYGTITSAKVMLDEGRSKGFGFVCFSAPDEATKAV 351
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 98/202 (48%), Gaps = 24/202 (11%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRRSAAMAILSLN 115
+VYV N +TE L E+F G + +++ KD S +GF+ + + +A A+ LN
Sbjct: 193 NVYVKNFGEDLTEEALHEMFEKYGSITSHRVMMKDGKSRGFGFVAFENPDAAERAVQELN 252
Query: 116 GRHLF-GQPIKVNWAYASGQRE-DTSGHF--------------NIFVGDLSPEVTDATLF 159
+ L G+ + V A +R+ + F N++V +L + D L
Sbjct: 253 AKELSDGKVLYVGRAQKKNERQMELKRRFEQLKMERLTRYHGVNLYVKNLDDTIDDERLR 312
Query: 160 ACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT 219
F+ Y + + A+VM D+ GRS+GFGFV F +A A+ ++ G+ +GS+ + A
Sbjct: 313 KEFAPYGTITSAKVMLDE--GRSKGFGFVCFSAPDEATKAVTEMNGRIVGSKPLYVALAQ 370
Query: 220 KGAGNNEDKQSSDAKSVVELTN 241
+ E+++S A ++ N
Sbjct: 371 R----KEERKSHLASQYIQRVN 388
>gi|291398067|ref|XP_002715414.1| PREDICTED: splicing factor 3b, subunit 4 [Oryctolagus cuniculus]
Length = 384
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 58/169 (34%), Positives = 94/169 (55%), Gaps = 9/169 (5%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS-----YGFIHYFDRRSAAMAIL 112
+VYVG + +V+EPLL E+F GPV + KD+ + YGF+ + A AI
Sbjct: 14 TVYVGGLDEKVSEPLLWELFLQAGPVVNTHM-PKDRVTGQHQGYGFVEFLSEEDADYAIK 72
Query: 113 SLNGRHLFGQPIKVNWAYASGQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSC-SDA 171
+N L+G+PI+VN A A + D NIF+G+L PE+ + L+ FS +
Sbjct: 73 IMNMIKLYGKPIRVNKASAHNKNLDVGA--NIFIGNLDPEIDEKLLYDTFSAFGVILQTP 130
Query: 172 RVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATK 220
++M D TG S+G+ F++F + + +AI + G++L +R I ++A K
Sbjct: 131 KIMRDPDTGNSKGYAFINFASFDASDAAIEAMNGQYLCNRPITVSYAFK 179
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 48/216 (22%), Positives = 96/216 (44%), Gaps = 44/216 (20%)
Query: 131 ASGQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSF 190
A+G + + ++VG L +V++ L+ F + + D+ TG+ +G+GFV F
Sbjct: 2 AAGPISERNQDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEF 61
Query: 191 RNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKET 250
+++DA AI + L + IR N K + +N++ L G++
Sbjct: 62 LSEEDADYAIKIMNMIKLYGKPIRVN---KASAHNKN-----------LDVGAN------ 101
Query: 251 TNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRD------KGFGF 304
+++GNL PE+ + L+ F + G +++ ++ RD KG+ F
Sbjct: 102 --------------IFIGNLDPEIDEKLLYDTFSAFGV-ILQTPKIMRDPDTGNSKGYAF 146
Query: 305 VRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSK 340
+ +++ + AI+ N YL + + S+ K
Sbjct: 147 INFASFDASDAAIEAMN---GQYLCNRPITVSYAFK 179
>gi|256271306|gb|EEU06376.1| Pab1p [Saccharomyces cerevisiae JAY291]
Length = 577
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/281 (25%), Positives = 126/281 (44%), Gaps = 42/281 (14%)
Query: 54 STCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIR----KDKSSYGFIHYFDRRSAAM 109
++ S+YVG++ V+E L ++FS G V ++ R K Y ++++ D +
Sbjct: 35 NSSASLYVGDLEPSVSEAHLYDIFSPIGSVSSIRVCRDAITKTSLGYAYVNFNDHEAGRK 94
Query: 110 AILSLNGRHLFGQPIKVNWAYASGQREDT---SGHFNIFVGDLSPEVTDATLFACFSVYP 166
AI LN + G+ ++ W+ QR+ + G NIF+ +L P++ + L+ FSV+
Sbjct: 95 AIEQLNYTPIKGRLCRIMWS----QRDPSLRKKGSGNIFIKNLHPDIDNKALYDTFSVFG 150
Query: 167 SCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNE 226
+++ D+ G+S+GFGFV F + A+ AI+ L G L ++I
Sbjct: 151 DILSSKIATDE-NGKSKGFGFVHFEEEGAAKEAIDALNGMLLNGQEIYV----------- 198
Query: 227 DKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSL 286
+ ++ +++ E YT +YV N+ E T F
Sbjct: 199 ----------------APHLSRKERDSQLEETKAHYTNLYVKNINSETTDEQFQELFAKF 242
Query: 287 GAGVIEEVRVQRD---KGFGFVRYSTHAEAALAIQMGNTTQ 324
G V + D KGFGFV Y H +A A++ N ++
Sbjct: 243 GPIVSASLEKDADGKLKGFGFVNYEKHEDAVKAVEALNDSE 283
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 123/291 (42%), Gaps = 45/291 (15%)
Query: 52 DPSTCR----SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS---YGFIHYFDR 104
DPS + ++++ N+H + L + FS G + K+ + +GF+H+ +
Sbjct: 117 DPSLRKKGSGNIFIKNLHPDIDNKALYDTFSVFGDILSSKIATDENGKSKGFGFVHFEEE 176
Query: 105 RSAAMAILSLNGRHLFGQPIKVNWAYASGQR----EDTSGHF-NIFVGDLSPEVTDATLF 159
+A AI +LNG L GQ I V + +R E+T H+ N++V +++ E TD
Sbjct: 177 GAAKEAIDALNGMLLNGQEIYVAPHLSRKERDSQLEETKAHYTNLYVKNINSETTDEQFQ 236
Query: 160 ACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT 219
F+ + A + D G+ +GFGFV++ +DA A+ L L ++ A
Sbjct: 237 ELFAKFGPIVSASLEKD-ADGKLKGFGFVNYEKHEDAVKAVEALNDSELNGEKLYVGRAQ 295
Query: 220 KGAGNNED----KQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVT 275
K NE K+ +A + ++ Q ++V NL V
Sbjct: 296 K---KNERMHVLKKQYEAYRLEKMAKY------------------QGVNLFVKNLDDSVD 334
Query: 276 QLDLHRHFHSLGAGVIEEVRVQR-----DKGFGFVRYSTHAEAALAIQMGN 321
L F G I +V R KGFGFV +ST EA AI N
Sbjct: 335 DEKLEEEFAPY--GTITSAKVMRTENGKSKGFGFVCFSTPEEATKAITEKN 383
>gi|449284083|gb|EMC90664.1| Polyadenylate-binding protein 1, partial [Columba livia]
Length = 573
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/283 (27%), Positives = 131/283 (46%), Gaps = 31/283 (10%)
Query: 52 DPSTCRS----VYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRR 105
DPS +S +++ N+ + L + FS+ G + CK++ + S YGF+H+ +
Sbjct: 26 DPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQE 85
Query: 106 SAAMAILSLNGRHLFGQPIKVNWAYASGQREDTSG-----HFNIFVGDLSPEVTDATLFA 160
+A AI +NG L + + V + +RE G N+++ + ++ D L
Sbjct: 86 AAERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKE 145
Query: 161 CFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATK 220
F + +VM D+ +G+S+GFGFVSF +DAQ A++++ GK L +QI A K
Sbjct: 146 LFGKFGPALSVKVMTDE-SGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQK 204
Query: 221 GAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLH 280
++Q+ + E K+ T Q +YV NL + L
Sbjct: 205 KV----ERQTELKRKF--------EQMKQDRITRY-----QGVNLYVKNLDDGIDDERLR 247
Query: 281 RHFHSLGAGVIEEVRVQ--RDKGFGFVRYSTHAEAALAIQMGN 321
+ F G +V ++ R KGFGFV +S+ EA A+ N
Sbjct: 248 KEFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMN 290
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 106/242 (43%), Gaps = 46/242 (19%)
Query: 107 AAMAILSLNGRHLFGQPIKVNWAYASGQREDT---SGHFNIFVGDLSPEVTDATLFACFS 163
A A+ ++N + G+P+++ W+ QR+ + SG NIF+ +L + + L+ FS
Sbjct: 1 AERALDTMNFDVIKGKPVRIMWS----QRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFS 56
Query: 164 VYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAG 223
+ + +V+ D+ S+G+GFV F Q+ A+ AI + G L R++ G
Sbjct: 57 AFGNILSCKVVCDENG--SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFV-------G 107
Query: 224 NNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHF 283
+ ++ +A EL + E +T VY+ N ++ L F
Sbjct: 108 RFKSRKEREA----ELGARAKE----------------FTNVYIKNFGEDMDDERLKELF 147
Query: 284 HSLGAGVIEEVRVQRD-----KGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWG 338
G + V+V D KGFGFV + H +A A+ N + L GKQ+
Sbjct: 148 GKFGPAL--SVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKE---LNGKQIYVGRA 202
Query: 339 SK 340
K
Sbjct: 203 QK 204
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 86/181 (47%), Gaps = 20/181 (11%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS---YGFIHYFDRRSAAMAILSL 114
+VY+ N + + L+E+F GP K++ + +GF+ + A A+ +
Sbjct: 128 NVYIKNFGEDMDDERLKELFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEM 187
Query: 115 NGRHLFGQPIKVNWAYASGQRE------------DTSGHF---NIFVGDLSPEVTDATLF 159
NG+ L G+ I V A +R+ D + N++V +L + D L
Sbjct: 188 NGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLR 247
Query: 160 ACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT 219
FS + + + A+VM + GRS+GFGFV F + ++A A+ ++ G+ + ++ + A
Sbjct: 248 KEFSPFGTITSAKVMME--GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQ 305
Query: 220 K 220
+
Sbjct: 306 R 306
>gi|323304584|gb|EGA58347.1| Nam8p [Saccharomyces cerevisiae FostersB]
Length = 523
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 103/342 (30%), Positives = 160/342 (46%), Gaps = 65/342 (19%)
Query: 45 GNLPPGFDPSTCRSVYVG------NIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSSYGF 98
G+L P +D +T R ++ N+ L SS GP K+ Y F
Sbjct: 59 GDLDPTWDKNTVRQIWASLGEANINVRMMWNNTLNNGSRSSMGP--------KNNQGYCF 110
Query: 99 IHYFDRRSAAMAILSLNGRHLFGQP---IKVNWAYASGQRE-------DTSGHFNIFVGD 148
+ + AA A+L NG + P +K+NWA +S + + +IFVGD
Sbjct: 111 VDFPSSTHAANALLK-NGMLIPNFPNKKLKLNWATSSYSNSNNSLNNVKSGNNCSIFVGD 169
Query: 149 LSPEVTDATLFACF-SVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKW 207
L+P VT++ LF F + Y S S A+++ DQ TG S+G+GFV F N + Q A++++ G +
Sbjct: 170 LAPNVTESQLFELFINRYASTSHAKIVHDQVTGMSKGYGFVKFTNSDEQQLALSEMQGVF 229
Query: 208 LGSRQIRCNWATKG-----AGNNEDKQSSD------------AKSVVELTNGSSEDGKET 250
L R I+ T G +GNN+ +SS +K L+NG++ G +
Sbjct: 230 LNGRAIKVG-PTSGQQQHVSGNNDYNRSSSSLNNENVDSRFLSKGQSFLSNGNNNMGFKR 288
Query: 251 TNT--------EAPENN----PQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQR 298
+ + P N P TTV++G L+ VT+ +L +F G I V++
Sbjct: 289 NHMSQFIYPVQQQPSLNHFTDPNNTTVFIGGLSSLVTEDELRAYFQPF--GTIVYVKIPV 346
Query: 299 DKGFGFVRYSTH--AEAALAIQMGNTTQSSYLFGKQMKCSWG 338
KG GFV+Y AEAA+A G +S +++ SWG
Sbjct: 347 GKGCGFVQYVDRLSAEAAIAGMQGFPIANS-----RVRLSWG 383
>gi|26354649|dbj|BAC40951.1| unnamed protein product [Mus musculus]
Length = 636
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/283 (27%), Positives = 131/283 (46%), Gaps = 31/283 (10%)
Query: 52 DPSTCRS----VYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRR 105
DPS +S +++ N+ + L + FS+ G + CK++ + S YGF+H+ +
Sbjct: 90 DPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQE 149
Query: 106 SAAMAILSLNGRHLFGQPIKVNWAYASGQREDTSG-----HFNIFVGDLSPEVTDATLFA 160
+A AI +NG L + + V + +RE G N+++ + ++ D L
Sbjct: 150 AAERAIKKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKE 209
Query: 161 CFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATK 220
F + +VM D+ +G+S+GFGFVSF +DAQ A++++ GK L +QI A K
Sbjct: 210 LFGKFGPALSVKVMTDE-SGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQK 268
Query: 221 GAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLH 280
++Q+ + E K+ T Q +YV NL + L
Sbjct: 269 KV----ERQTELKRKF--------EQMKQDRITRY-----QGVNLYVKNLDDGIDDERLR 311
Query: 281 RHFHSLGAGVIEEVRVQ--RDKGFGFVRYSTHAEAALAIQMGN 321
+ F G +V ++ R KGFGFV +S+ EA A+ N
Sbjct: 312 KEFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMN 354
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/295 (26%), Positives = 134/295 (45%), Gaps = 50/295 (16%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIR----KDKSSYGFIHYFDRRSAAMAILS 113
S+YVG++H VTE +L E FS GP+ ++ R + Y ++++ A A+ +
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 114 LNGRHLFGQPIKVNWAYASGQREDT---SGHFNIFVGDLSPEVTDATLFACFSVYPSCSD 170
+N + G+P+++ W+ QR+ + SG NIF+ +L + + L+ FS + +
Sbjct: 72 MNFDVIKGKPVRIMWS----QRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 171 ARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQS 230
+V+ D+ S+G+GFV F Q+ A+ AI + G L R++ G + ++
Sbjct: 128 CKVVCDENG--SKGYGFVHFETQEAAERAIKKMNGMLLNDRKVFV-------GRFKSRKE 178
Query: 231 SDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGV 290
+A EL + E +T VY+ N ++ L F G +
Sbjct: 179 REA----ELGARAKE----------------FTNVYIKNFGEDMDDERLKELFGKFGPAL 218
Query: 291 IEEVRVQRD-----KGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSK 340
V+V D KGFGFV + H +A A+ N + L GKQ+ K
Sbjct: 219 --SVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKE---LNGKQIYVGRAQK 268
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 86/181 (47%), Gaps = 20/181 (11%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS---YGFIHYFDRRSAAMAILSL 114
+VY+ N + + L+E+F GP K++ + +GF+ + A A+ +
Sbjct: 192 NVYIKNFGEDMDDERLKELFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEM 251
Query: 115 NGRHLFGQPIKVNWAYASGQRE------------DTSGHF---NIFVGDLSPEVTDATLF 159
NG+ L G+ I V A +R+ D + N++V +L + D L
Sbjct: 252 NGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLR 311
Query: 160 ACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT 219
FS + + + A+VM + GRS+GFGFV F + ++A A+ ++ G+ + ++ + A
Sbjct: 312 KEFSPFGTITSAKVMME--GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQ 369
Query: 220 K 220
+
Sbjct: 370 R 370
>gi|242039481|ref|XP_002467135.1| hypothetical protein SORBIDRAFT_01g020190 [Sorghum bicolor]
gi|241920989|gb|EER94133.1| hypothetical protein SORBIDRAFT_01g020190 [Sorghum bicolor]
Length = 355
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/200 (32%), Positives = 106/200 (53%), Gaps = 10/200 (5%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS-----YGFIHYFDRRSAAMAIL 112
+ YVGN+ QV+E LL E+F GPV + KD+ + YGF+ + A AI
Sbjct: 26 TTYVGNLDPQVSEELLWELFVQAGPVVNV-YVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
Query: 113 SLNGRHLFGQPIKVNWAYASGQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPS-CSDA 171
LN L+G+PI+VN A + D N+F+G+L P+V + L+ FS + ++
Sbjct: 85 ILNMIKLYGKPIRVNKASQDKKSLDVGA--NLFIGNLDPDVDEKLLYDTFSAFGVIVTNP 142
Query: 172 RVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSS 231
++M D +TG SRGFGFVS+ + + + AI + + L +R I ++A K E + +
Sbjct: 143 KIMRDPETGNSRGFGFVSYDSFESSDQAIEAMNNQHLCNRPITVSYAYKKDTKGE-RHGT 201
Query: 232 DAKSVVELTNGSSEDGKETT 251
A+ ++ N S+ + T
Sbjct: 202 PAERLLAANNPGSQKNRPHT 221
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 90/202 (44%), Gaps = 44/202 (21%)
Query: 145 FVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLT 204
+VG+L P+V++ L+ F + V D+ T +G+GFV FR+++DA AI L
Sbjct: 28 YVGNLDPQVSEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKILN 87
Query: 205 GKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTT 264
L + IR N A+ +DK+S D +
Sbjct: 88 MIKLYGKPIRVNKAS------QDKKSLDVGA----------------------------N 113
Query: 265 VYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRD------KGFGFVRYSTHAEAALAIQ 318
+++GNL P+V + L+ F + G ++ ++ RD +GFGFV Y + + AI+
Sbjct: 114 LFIGNLDPDVDEKLLYDTFSAFGV-IVTNPKIMRDPETGNSRGFGFVSYDSFESSDQAIE 172
Query: 319 MGNTTQSSYLFGKQMKCSWGSK 340
N + +L + + S+ K
Sbjct: 173 AMN---NQHLCNRPITVSYAYK 191
Score = 43.1 bits (100), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 47/86 (54%), Gaps = 11/86 (12%)
Query: 261 QYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDK------GFGFVRYSTHAEAA 314
Q T YVGNL P+V++ L F + AG + V V +D+ G+GFV + + +A
Sbjct: 23 QDATTYVGNLDPQVSEELLWELF--VQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDAD 80
Query: 315 LAIQMGNTTQSSYLFGKQMKCSWGSK 340
AI++ N + L+GK ++ + S+
Sbjct: 81 YAIKILNMIK---LYGKPIRVNKASQ 103
>gi|172092|gb|AAA34838.1| polyadenylate-binding protein [Saccharomyces cerevisiae]
Length = 577
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/281 (25%), Positives = 126/281 (44%), Gaps = 42/281 (14%)
Query: 54 STCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIR----KDKSSYGFIHYFDRRSAAM 109
++ S+YVG++ V+E L ++FS G V ++ R K Y ++++ D +
Sbjct: 35 NSSASLYVGDLEPSVSEAHLYDIFSPIGSVSSIRVCRDAITKTSLGYAYVNFNDHEAGRK 94
Query: 110 AILSLNGRHLFGQPIKVNWAYASGQREDT---SGHFNIFVGDLSPEVTDATLFACFSVYP 166
AI LN + G+ ++ W+ QR+ + G NIF+ +L P++ + L+ FSV+
Sbjct: 95 AIEQLNYTPIKGRLCRIMWS----QRDPSLRKKGSGNIFIKNLHPDIDNKALYDTFSVFG 150
Query: 167 SCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNE 226
+++ D+ G+S+GFGFV F + A+ AI+ L G L ++I
Sbjct: 151 DILSSKIATDE-NGKSKGFGFVHFEEEGAAKEAIDALNGMLLNGQEIYV----------- 198
Query: 227 DKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSL 286
+ ++ +++ E YT +YV N+ E T F
Sbjct: 199 ----------------APHLSRKERDSQLEETKAHYTNLYVKNINSETTDEQFQELFAKF 242
Query: 287 GAGVIEEVRVQRD---KGFGFVRYSTHAEAALAIQMGNTTQ 324
G V + D KGFGFV Y H +A A++ N ++
Sbjct: 243 GPIVSASLEKDADGKLKGFGFVNYEKHEDAVKAVEALNDSE 283
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 123/291 (42%), Gaps = 45/291 (15%)
Query: 52 DPSTCR----SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS---YGFIHYFDR 104
DPS + ++++ N+H + L + FS G + K+ + +GF+H+ +
Sbjct: 117 DPSLRKKGSGNIFIKNLHPDIDNKALYDTFSVFGDILSSKIATDENGKSKGFGFVHFEEE 176
Query: 105 RSAAMAILSLNGRHLFGQPIKVNWAYASGQR----EDTSGHF-NIFVGDLSPEVTDATLF 159
+A AI +LNG L GQ I V + +R E+T H+ N++V +++ E TD
Sbjct: 177 GAAKEAIDALNGMLLNGQEIYVAPHLSRKERDSQLEETKAHYTNLYVKNINSETTDEQFQ 236
Query: 160 ACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT 219
F+ + A + D G+ +GFGFV++ +DA A+ L L ++ A
Sbjct: 237 ELFAKFGPIVSASLEKD-ADGKLKGFGFVNYEKHEDAVKAVEALNDSELNGEKLYVGRAQ 295
Query: 220 KGAGNNED----KQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVT 275
K NE K+ +A + ++ Q ++V NL V
Sbjct: 296 K---KNERMHVLKKQYEAYRLEKMAKY------------------QGVNLFVKNLDDSVD 334
Query: 276 QLDLHRHFHSLGAGVIEEVRVQR-----DKGFGFVRYSTHAEAALAIQMGN 321
L F G I +V R KGFGFV +ST EA AI N
Sbjct: 335 DEKLEEEFAPY--GTITSAKVMRTENGKSKGFGFVCFSTPEEATKAITEKN 383
>gi|6321013|ref|NP_011092.1| Pab1p [Saccharomyces cerevisiae S288c]
gi|417441|sp|P04147.4|PABP_YEAST RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=ARS consensus-binding protein ACBP-67;
AltName: Full=Polyadenylate tail-binding protein
gi|171967|gb|AAA34787.1| poly (A)-binding protein [Saccharomyces cerevisiae]
gi|218386|dbj|BAA00017.1| polyadenylate-binding protein [Saccharomyces cerevisiae]
gi|603406|gb|AAB64692.1| Pab1p: polyadenylate-binding protein [Saccharomyces cerevisiae]
gi|51013159|gb|AAT92873.1| YER165W [Saccharomyces cerevisiae]
gi|151944882|gb|EDN63141.1| poly(A) binding protein [Saccharomyces cerevisiae YJM789]
gi|207345803|gb|EDZ72507.1| YER165Wp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|259146093|emb|CAY79353.1| Pab1p [Saccharomyces cerevisiae EC1118]
gi|285811799|tpg|DAA07827.1| TPA: Pab1p [Saccharomyces cerevisiae S288c]
gi|365765943|gb|EHN07446.1| Pab1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
gi|392299869|gb|EIW10961.1| Pab1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 577
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/281 (25%), Positives = 126/281 (44%), Gaps = 42/281 (14%)
Query: 54 STCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIR----KDKSSYGFIHYFDRRSAAM 109
++ S+YVG++ V+E L ++FS G V ++ R K Y ++++ D +
Sbjct: 35 NSSASLYVGDLEPSVSEAHLYDIFSPIGSVSSIRVCRDAITKTSLGYAYVNFNDHEAGRK 94
Query: 110 AILSLNGRHLFGQPIKVNWAYASGQREDT---SGHFNIFVGDLSPEVTDATLFACFSVYP 166
AI LN + G+ ++ W+ QR+ + G NIF+ +L P++ + L+ FSV+
Sbjct: 95 AIEQLNYTPIKGRLCRIMWS----QRDPSLRKKGSGNIFIKNLHPDIDNKALYDTFSVFG 150
Query: 167 SCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNE 226
+++ D+ G+S+GFGFV F + A+ AI+ L G L ++I
Sbjct: 151 DILSSKIATDE-NGKSKGFGFVHFEEEGAAKEAIDALNGMLLNGQEIYV----------- 198
Query: 227 DKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSL 286
+ ++ +++ E YT +YV N+ E T F
Sbjct: 199 ----------------APHLSRKERDSQLEETKAHYTNLYVKNINSETTDEQFQELFAKF 242
Query: 287 GAGVIEEVRVQRD---KGFGFVRYSTHAEAALAIQMGNTTQ 324
G V + D KGFGFV Y H +A A++ N ++
Sbjct: 243 GPIVSASLEKDADGKLKGFGFVNYEKHEDAVKAVEALNDSE 283
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 123/291 (42%), Gaps = 45/291 (15%)
Query: 52 DPSTCR----SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS---YGFIHYFDR 104
DPS + ++++ N+H + L + FS G + K+ + +GF+H+ +
Sbjct: 117 DPSLRKKGSGNIFIKNLHPDIDNKALYDTFSVFGDILSSKIATDENGKSKGFGFVHFEEE 176
Query: 105 RSAAMAILSLNGRHLFGQPIKVNWAYASGQR----EDTSGHF-NIFVGDLSPEVTDATLF 159
+A AI +LNG L GQ I V + +R E+T H+ N++V +++ E TD
Sbjct: 177 GAAKEAIDALNGMLLNGQEIYVAPHLSRKERDSQLEETKAHYTNLYVKNINSETTDEQFQ 236
Query: 160 ACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT 219
F+ + A + D G+ +GFGFV++ +DA A+ L L ++ A
Sbjct: 237 ELFAKFGPIVSASLEKD-ADGKLKGFGFVNYEKHEDAVKAVEALNDSELNGEKLYVGRAQ 295
Query: 220 KGAGNNED----KQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVT 275
K NE K+ +A + ++ Q ++V NL V
Sbjct: 296 K---KNERMHVLKKQYEAYRLEKMAKY------------------QGVNLFVKNLDDSVD 334
Query: 276 QLDLHRHFHSLGAGVIEEVRVQR-----DKGFGFVRYSTHAEAALAIQMGN 321
L F G I +V R KGFGFV +ST EA AI N
Sbjct: 335 DEKLEEEFAPY--GTITSAKVMRTENGKSKGFGFVCFSTPEEATKAITEKN 383
>gi|72534835|ref|NP_001026846.1| poly A binding protein, cytoplasmic 1 a [Danio rerio]
gi|71534060|gb|AAH99992.1| Poly A binding protein, cytoplasmic 1 a [Danio rerio]
Length = 634
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/284 (27%), Positives = 127/284 (44%), Gaps = 33/284 (11%)
Query: 52 DPSTCRS----VYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRR 105
DPS +S +++ N+ + L + FS+ G + CK++ + S YGF+H+
Sbjct: 90 DPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETHE 149
Query: 106 SAAMAILSLNGRHLFGQPIKVNWAYASGQREDTSG-----HFNIFVGDLSPEVTDATLFA 160
+A AI +NG L + + V + +RE G N+++ + ++ D L
Sbjct: 150 AAERAIEKMNGMLLNDRKVFVGRFKSRKEREAEMGARAKEFTNVYIKNFGEDMDDEKLKE 209
Query: 161 CFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWA-T 219
F Y RVM D +G+S+GFGFVSF +DAQ A++++ GK + +Q+ A
Sbjct: 210 IFCKYGPALSIRVMTDD-SGKSKGFGFVSFERHEDAQRAVDEMNGKEMNGKQVYVGRAQK 268
Query: 220 KGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDL 279
KG E K+ + +T Q +YV NL + L
Sbjct: 269 KGERQTELKRKFEQMKQDRMTRY------------------QGVNLYVKNLDDGLDDERL 310
Query: 280 HRHFHSLGAGVIEEVRVQ--RDKGFGFVRYSTHAEAALAIQMGN 321
+ F G +V ++ R KGFGFV +S+ EA A+ N
Sbjct: 311 RKEFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMN 354
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 75/295 (25%), Positives = 130/295 (44%), Gaps = 50/295 (16%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIR----KDKSSYGFIHYFDRRSAAMAILS 113
S+YVG++H VTE +L E FS GP+ ++ R + Y ++++ A A+ +
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMMTRRSLGYAYVNFQQPADAERALDT 71
Query: 114 LNGRHLFGQPIKVNWAYASGQREDT---SGHFNIFVGDLSPEVTDATLFACFSVYPSCSD 170
+N + G+P+++ W+ QR+ + SG NIF+ +L + + L+ FS + +
Sbjct: 72 MNFDVIKGRPVRIMWS----QRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 171 ARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQS 230
+V+ D+ S+G+GFV F + A+ AI + G L R++ K E +
Sbjct: 128 CKVVCDENG--SKGYGFVHFETHEAAERAIEKMNGMLLNDRKVFVGR-FKSRKEREAEMG 184
Query: 231 SDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGV 290
+ AK ++T VY+ N ++ L F G +
Sbjct: 185 ARAK--------------------------EFTNVYIKNFGEDMDDEKLKEIFCKYGPAL 218
Query: 291 IEEVRVQRD-----KGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSK 340
+RV D KGFGFV + H +A A+ N + + GKQ+ K
Sbjct: 219 --SIRVMTDDSGKSKGFGFVSFERHEDAQRAVDEMNGKE---MNGKQVYVGRAQK 268
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 87/181 (48%), Gaps = 20/181 (11%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS---YGFIHYFDRRSAAMAILSL 114
+VY+ N + + L+E+F GP +++ D +GF+ + A A+ +
Sbjct: 192 NVYIKNFGEDMDDEKLKEIFCKYGPALSIRVMTDDSGKSKGFGFVSFERHEDAQRAVDEM 251
Query: 115 NGRHLFGQPIKVNWAYASGQRE------------DTSGHF---NIFVGDLSPEVTDATLF 159
NG+ + G+ + V A G+R+ D + N++V +L + D L
Sbjct: 252 NGKEMNGKQVYVGRAQKKGERQTELKRKFEQMKQDRMTRYQGVNLYVKNLDDGLDDERLR 311
Query: 160 ACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT 219
FS + + + A+VM + GRS+GFGFV F + ++A A+ ++ G+ + ++ + A
Sbjct: 312 KEFSPFGTITSAKVMME--GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQ 369
Query: 220 K 220
+
Sbjct: 370 R 370
>gi|348513245|ref|XP_003444153.1| PREDICTED: splicing factor 3B subunit 4-like [Oreochromis
niloticus]
Length = 401
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 58/169 (34%), Positives = 94/169 (55%), Gaps = 9/169 (5%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS-----YGFIHYFDRRSAAMAIL 112
+VYVG + +V+EPLL E+F GPV + KD+ + YGF+ + A AI
Sbjct: 14 TVYVGGLDEKVSEPLLWELFLQAGPVVNTHM-PKDRVTGQHQGYGFVEFLSEEDADYAIK 72
Query: 113 SLNGRHLFGQPIKVNWAYASGQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDA- 171
+N L+G+PI+VN A A + D NIF+G+L PE+ + L+ FS +
Sbjct: 73 IMNMIKLYGKPIRVNKASAHNKNLDVGA--NIFIGNLDPEIDEKLLYDTFSAFGVILQTP 130
Query: 172 RVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATK 220
++M D TG S+G+ F++F + + +AI + G++L +R I ++A K
Sbjct: 131 KIMRDPDTGNSKGYAFINFASFDASDAAIEAMNGQYLCNRPITVSYAFK 179
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 92/208 (44%), Gaps = 44/208 (21%)
Query: 144 IFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDL 203
++VG L +V++ L+ F + + D+ TG+ +G+GFV F +++DA AI +
Sbjct: 15 VYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYAIKIM 74
Query: 204 TGKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYT 263
L + IR N K + +N++ L G++
Sbjct: 75 NMIKLYGKPIRVN---KASAHNKN-----------LDVGAN------------------- 101
Query: 264 TVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRD------KGFGFVRYSTHAEAALAI 317
+++GNL PE+ + L+ F + G +++ ++ RD KG+ F+ +++ + AI
Sbjct: 102 -IFIGNLDPEIDEKLLYDTFSAFGV-ILQTPKIMRDPDTGNSKGYAFINFASFDASDAAI 159
Query: 318 QMGNTTQSSYLFGKQMKCSWGSKPTPPG 345
+ N YL + + S+ K G
Sbjct: 160 EAMN---GQYLCNRPITVSYAFKKDSKG 184
>gi|327283838|ref|XP_003226647.1| PREDICTED: polyadenylate-binding protein 1-like [Anolis
carolinensis]
Length = 636
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/283 (27%), Positives = 131/283 (46%), Gaps = 31/283 (10%)
Query: 52 DPSTCRS----VYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRR 105
DPS +S +++ N+ + L + FS+ G + CK++ + S YGF+H+ +
Sbjct: 90 DPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQE 149
Query: 106 SAAMAILSLNGRHLFGQPIKVNWAYASGQREDTSG-----HFNIFVGDLSPEVTDATLFA 160
+A AI +NG L + + V + +RE G N+++ + ++ D L
Sbjct: 150 AAERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKE 209
Query: 161 CFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATK 220
F + +VM D+ +G+S+GFGFVSF +DAQ A++++ GK L +QI A K
Sbjct: 210 LFGKFGPALSVKVMTDE-SGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQK 268
Query: 221 GAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLH 280
++Q+ + E K+ T Q +YV NL + L
Sbjct: 269 KV----ERQTELKRKF--------EQMKQDRITRY-----QGVNLYVKNLDDGIDDERLR 311
Query: 281 RHFHSLGAGVIEEVRVQ--RDKGFGFVRYSTHAEAALAIQMGN 321
+ F G +V ++ R KGFGFV +S+ EA A+ N
Sbjct: 312 KEFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMN 354
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/295 (26%), Positives = 134/295 (45%), Gaps = 50/295 (16%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIR----KDKSSYGFIHYFDRRSAAMAILS 113
S+YVG++H VTE +L E FS GP+ ++ R + Y ++++ A A+ +
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 114 LNGRHLFGQPIKVNWAYASGQREDT---SGHFNIFVGDLSPEVTDATLFACFSVYPSCSD 170
+N + G+P+++ W+ QR+ + SG NIF+ +L + + L+ FS + +
Sbjct: 72 MNFDVIKGKPVRIMWS----QRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 171 ARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQS 230
+V+ D+ S+G+GFV F Q+ A+ AI + G L R++ G + ++
Sbjct: 128 CKVVCDENG--SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFV-------GRFKSRKE 178
Query: 231 SDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGV 290
+A EL + E +T VY+ N ++ L F G +
Sbjct: 179 REA----ELGARAKE----------------FTNVYIKNFGEDMDDERLKELFGKFGPAL 218
Query: 291 IEEVRVQRD-----KGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSK 340
V+V D KGFGFV + H +A A+ N + L GKQ+ K
Sbjct: 219 --SVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKE---LNGKQIYVGRAQK 268
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 86/181 (47%), Gaps = 20/181 (11%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS---YGFIHYFDRRSAAMAILSL 114
+VY+ N + + L+E+F GP K++ + +GF+ + A A+ +
Sbjct: 192 NVYIKNFGEDMDDERLKELFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEM 251
Query: 115 NGRHLFGQPIKVNWAYASGQRE------------DTSGHF---NIFVGDLSPEVTDATLF 159
NG+ L G+ I V A +R+ D + N++V +L + D L
Sbjct: 252 NGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLR 311
Query: 160 ACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT 219
FS + + + A+VM + GRS+GFGFV F + ++A A+ ++ G+ + ++ + A
Sbjct: 312 KEFSPFGTITSAKVMME--GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQ 369
Query: 220 K 220
+
Sbjct: 370 R 370
>gi|321479244|gb|EFX90200.1| hypothetical protein DAPPUDRAFT_40110 [Daphnia pulex]
Length = 268
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/219 (31%), Positives = 109/219 (49%), Gaps = 9/219 (4%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS-----YGFIHYFDRRSAAMAIL 112
++YVG + +VTEPLL E+F GPV + KD+ + YGFI + A A
Sbjct: 14 TIYVGGLDEKVTEPLLWELFVQGGPVVNVHM-PKDRITLLHQGYGFIEFLSEDDADYACK 72
Query: 113 SLNGRHLFGQPIKVNWAYASGQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDA- 171
+N L+G+PI+VN A A + D NIF+G+L PEV + L+ FS +
Sbjct: 73 IMNMIKLYGKPIRVNKASAHQKNLDVGA--NIFIGNLDPEVDEKLLYDTFSAFGVILQTP 130
Query: 172 RVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSS 231
++M D TG S+GF F++F + + +AI + G++L +R I ++A K E S+
Sbjct: 131 KIMRDPTTGNSKGFAFINFASFDASDAAIEAMNGQYLCNRPITISYAFKKDSKGERHGSA 190
Query: 232 DAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNL 270
+ + + D +AP PQ + + + L
Sbjct: 191 AERLLAAQNPLAQTDRPHQLFADAPPIPPQMSNMGMSGL 229
>gi|349577826|dbj|GAA22994.1| K7_Pab1p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 577
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/281 (25%), Positives = 126/281 (44%), Gaps = 42/281 (14%)
Query: 54 STCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIR----KDKSSYGFIHYFDRRSAAM 109
++ S+YVG++ V+E L ++FS G V ++ R K Y ++++ D +
Sbjct: 35 NSSASLYVGDLEPSVSEAHLYDIFSPIGSVSSIRVCRDAITKTSLGYAYVNFNDHEAGRK 94
Query: 110 AILSLNGRHLFGQPIKVNWAYASGQREDT---SGHFNIFVGDLSPEVTDATLFACFSVYP 166
AI LN + G+ ++ W+ QR+ + G NIF+ +L P++ + L+ FSV+
Sbjct: 95 AIEQLNYTPIKGRLCRIMWS----QRDPSLRKKGSGNIFIKNLHPDIDNKALYDTFSVFG 150
Query: 167 SCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNE 226
+++ D+ G+S+GFGFV F + A+ AI+ L G L ++I
Sbjct: 151 DILSSKIATDE-NGKSKGFGFVHFEEEGAAKEAIDALNGMLLNGQEIYV----------- 198
Query: 227 DKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSL 286
+ ++ +++ E YT +YV N+ E T F
Sbjct: 199 ----------------APHLSRKERDSQLEETKAHYTNLYVKNINSETTDEQFQELFAKF 242
Query: 287 GAGVIEEVRVQRD---KGFGFVRYSTHAEAALAIQMGNTTQ 324
G V + D KGFGFV Y H +A A++ N ++
Sbjct: 243 GPIVSASLEKDADGKLKGFGFVNYEKHEDAVKAVEALNDSE 283
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 123/291 (42%), Gaps = 45/291 (15%)
Query: 52 DPSTCR----SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS---YGFIHYFDR 104
DPS + ++++ N+H + L + FS G + K+ + +GF+H+ +
Sbjct: 117 DPSLRKKGSGNIFIKNLHPDIDNKALYDTFSVFGDILSSKIATDENGKSKGFGFVHFEEE 176
Query: 105 RSAAMAILSLNGRHLFGQPIKVNWAYASGQR----EDTSGHF-NIFVGDLSPEVTDATLF 159
+A AI +LNG L GQ I V + +R E+T H+ N++V +++ E TD
Sbjct: 177 GAAKEAIDALNGMLLNGQEIYVAPHLSRKERDSQLEETKAHYTNLYVKNINSETTDEQFQ 236
Query: 160 ACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT 219
F+ + A + D G+ +GFGFV++ +DA A+ L L ++ A
Sbjct: 237 ELFAKFGPIVSASLEKD-ADGKLKGFGFVNYEKHEDAVKAVEALNDSELNGEKLYVGRAQ 295
Query: 220 KGAGNNED----KQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVT 275
K NE K+ +A + ++ Q ++V NL V
Sbjct: 296 K---KNERMHVLKKQYEAYRLEKMAKY------------------QGVNLFVKNLDDSVD 334
Query: 276 QLDLHRHFHSLGAGVIEEVRVQR-----DKGFGFVRYSTHAEAALAIQMGN 321
L F G I +V R KGFGFV +ST EA AI N
Sbjct: 335 DEKLEEEFAPY--GTITSAKVMRTENGKSKGFGFVCFSTPEEATKAITEKN 383
>gi|426391822|ref|XP_004062265.1| PREDICTED: polyadenylate-binding protein 1-like isoform 2 [Gorilla
gorilla gorilla]
gi|164651982|gb|ABY64766.1| ePAB [Homo sapiens]
Length = 330
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/279 (29%), Positives = 128/279 (45%), Gaps = 43/279 (15%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIR----KDKSSYGFIHYFDRRSAAMAILS 113
S+YVG++H VTE +L E FS GP+ ++ R + Y +I++ A A+ +
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADAERALDT 71
Query: 114 LNGRHLFGQPIKVNWAYAS-GQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDAR 172
+N L GQPI++ W+ G R+ SG NIF+ +L + + L+ FS + + +
Sbjct: 72 MNFEMLKGQPIRIMWSQRDPGLRK--SGVGNIFIKNLEDSIDNKALYDTFSTFGNILSCK 129
Query: 173 VMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSSD 232
V D+ SRGFGFV F + AQ AIN + G L R++ G+ + ++ +
Sbjct: 130 VACDEHG--SRGFGFVHFETHEAAQQAINTMNGMLLNDRKV-------FVGHFKSRRERE 180
Query: 233 AKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIE 292
A E ++T +YV NL +V + L F G +
Sbjct: 181 A--------------------ELGARALEFTNIYVKNLPVDVDEQGLQDLFSQFGKML-- 218
Query: 293 EVRVQRD-----KGFGFVRYSTHAEAALAIQMGNTTQSS 326
V+V RD + FGFV + H EA A+ N + S
Sbjct: 219 SVKVMRDNSGHSRCFGFVNFEKHEEAQKAVVHMNGKEVS 257
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 86/179 (48%), Gaps = 8/179 (4%)
Query: 49 PGFDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRRS 106
PG S ++++ N+ + L + FS+ G + CK+ + S +GF+H+ +
Sbjct: 91 PGLRKSGVGNIFIKNLEDSIDNKALYDTFSTFGNILSCKVACDEHGSRGFGFVHFETHEA 150
Query: 107 AAMAILSLNGRHLFGQPIKVNWAYASGQREDTSG-----HFNIFVGDLSPEVTDATLFAC 161
A AI ++NG L + + V + +RE G NI+V +L +V + L
Sbjct: 151 AQQAINTMNGMLLNDRKVFVGHFKSRREREAELGARALEFTNIYVKNLPVDVDEQGLQDL 210
Query: 162 FSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATK 220
FS + +VM D +G SR FGFV+F ++AQ A+ + GK + R + A K
Sbjct: 211 FSQFGKMLSVKVMRDN-SGHSRCFGFVNFEKHEEAQKAVVHMNGKEVSGRLLYAGRAQK 268
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 30/133 (22%), Positives = 59/133 (44%), Gaps = 18/133 (13%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDK---SSYGFIHYFDRRSAAMAILSL 114
++YV N+ V E LQ++FS G + K++R + +GF+++ A A++ +
Sbjct: 192 NIYVKNLPVDVDEQGLQDLFSQFGKMLSVKVMRDNSGHSRCFGFVNFEKHEEAQKAVVHM 251
Query: 115 NGRHLFGQPIKVNWAYASGQREDTSGH---------------FNIFVGDLSPEVTDATLF 159
NG+ + G+ + A +R++ N++V +L + D L
Sbjct: 252 NGKEVSGRLLYAGRAQKRVERQNELKRRFEQMKQDRLRRYQGVNLYVKNLDDSIDDDKLR 311
Query: 160 ACFSVYPSCSDAR 172
FS Y + A+
Sbjct: 312 KEFSPYGVITSAK 324
>gi|52346030|ref|NP_001005062.1| embryonic polyadenylate-binding protein [Xenopus (Silurana)
tropicalis]
gi|82235830|sp|Q6DEY7.1|EPAB_XENTR RecName: Full=Embryonic polyadenylate-binding protein;
Short=Embryonic poly(A)-binding protein; Short=ePABP
gi|49899948|gb|AAH76956.1| MGC89376 protein [Xenopus (Silurana) tropicalis]
Length = 629
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/278 (28%), Positives = 129/278 (46%), Gaps = 27/278 (9%)
Query: 49 PGFDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRRS 106
PG S +V++ N+ + L + FS+ G + CK++ + S YGF+H+ + +
Sbjct: 91 PGLRKSGVGNVFIKNLDESIDNKALYDTFSAFGNILSCKVVCDEHGSRGYGFVHFETQEA 150
Query: 107 AAMAILSLNGRHLFGQPIKVNWAYASGQREDTSG-----HFNIFVGDLSPEVTDATLFAC 161
A AI ++NG L + + V + +RE G N+++ + ++ D L
Sbjct: 151 ANRAIQTMNGMLLNDRKVFVGHFKSRRERELEYGAKVMEFTNVYIKNFGEDMDDKRLREI 210
Query: 162 FSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKG 221
FS + + +VM D TGRSRGFGFV++ N ++AQ A++++ GK + R I A K
Sbjct: 211 FSAFGNTLSVKVMMDD-TGRSRGFGFVNYGNHEEAQKAVSEMNGKEVNGRMIYVGRAQKR 269
Query: 222 AGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHR 281
++Q EL + +E N Q +YV NL + L +
Sbjct: 270 I----ERQG-------ELKRKFEQIKQERINRY------QGVNLYVKNLDDGIDDDRLRK 312
Query: 282 HFHSLGAGVIEEVRVQ--RDKGFGFVRYSTHAEAALAI 317
F G +V + KGFGFV +S+ EA A+
Sbjct: 313 EFSPYGTITSAKVMTEGGHSKGFGFVCFSSPEEATKAV 350
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 124/272 (45%), Gaps = 39/272 (14%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIR----KDKSSYGFIHYFDRRSAAMAILS 113
S+YVG++H VTE +L E FS GP+ ++ R + Y +I++ A A+ +
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPIMSIRVCRDIATRRSLGYAYINFQQPADAERALDT 71
Query: 114 LNGRHLFGQPIKVNWAYAS-GQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDAR 172
+N + G+PI++ W+ G R+ SG N+F+ +L + + L+ FS + + +
Sbjct: 72 MNFEVIKGRPIRIMWSQRDPGLRK--SGVGNVFIKNLDESIDNKALYDTFSAFGNILSCK 129
Query: 173 VMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSSD 232
V+ D+ SRG+GFV F Q+ A AI + G L R++ + E +
Sbjct: 130 VVCDEHG--SRGYGFVHFETQEAANRAIQTMNGMLLNDRKV---FVGHFKSRRERELEYG 184
Query: 233 AKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIE 292
AK V+E TN VY+ N ++ L F + G +
Sbjct: 185 AK-VMEFTN-----------------------VYIKNFGEDMDDKRLREIFSAFGNTLSV 220
Query: 293 EVRVQ---RDKGFGFVRYSTHAEAALAIQMGN 321
+V + R +GFGFV Y H EA A+ N
Sbjct: 221 KVMMDDTGRSRGFGFVNYGNHEEAQKAVSEMN 252
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 88/181 (48%), Gaps = 20/181 (11%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKD---KSSYGFIHYFDRRSAAMAILSL 114
+VY+ N + + L+E+FS+ G K++ D +GF++Y + A A+ +
Sbjct: 192 NVYIKNFGEDMDDKRLREIFSAFGNTLSVKVMMDDTGRSRGFGFVNYGNHEEAQKAVSEM 251
Query: 115 NGRHLFGQPIKVNWAYASGQRE-DTSGHF--------------NIFVGDLSPEVTDATLF 159
NG+ + G+ I V A +R+ + F N++V +L + D L
Sbjct: 252 NGKEVNGRMIYVGRAQKRIERQGELKRKFEQIKQERINRYQGVNLYVKNLDDGIDDDRLR 311
Query: 160 ACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT 219
FS Y + + A+VM + G S+GFGFV F + ++A A+ ++ G+ + ++ + A
Sbjct: 312 KEFSPYGTITSAKVMTE--GGHSKGFGFVCFSSPEEATKAVTEMNGRIVSTKPLYVALAQ 369
Query: 220 K 220
+
Sbjct: 370 R 370
>gi|224078006|ref|XP_002190593.1| PREDICTED: embryonic polyadenylate-binding protein-like
[Taeniopygia guttata]
Length = 629
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 79/282 (28%), Positives = 127/282 (45%), Gaps = 27/282 (9%)
Query: 49 PGFDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRRS 106
PG S +V++ N+ + L + FS+ G + CK++ + S YGF+H+ +
Sbjct: 91 PGLRKSGVGNVFIKNLDDSIDNKALYDTFSAFGNILSCKVVCDENGSRGYGFVHFETHEA 150
Query: 107 AAMAILSLNGRHLFGQPIKVNWAYASGQREDTSG-----HFNIFVGDLSPEVTDATLFAC 161
A AI ++NG L + + V + +RE G N+++ + ++ D L
Sbjct: 151 ATRAIETMNGMLLNDRKVFVGHFKSRKEREAEVGARAIEFTNVYIKNFGDDMDDDRLREI 210
Query: 162 FSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKG 221
FS + +VM D GRS+GFGFV+F ++AQ A+ D+ GK + R + A K
Sbjct: 211 FSRFGKTLSVKVMMDN-NGRSKGFGFVNFEKHEEAQKAVADMNGKEINGRLLYVGRAQK- 268
Query: 222 AGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHR 281
++QS EL + +E N Q +YV NL + L +
Sbjct: 269 ---RLERQS-------ELKRKFEQMKQERVNRY------QGVNLYVKNLDDGIDDERLRK 312
Query: 282 HFHSLGAGVIEEVRVQ--RDKGFGFVRYSTHAEAALAIQMGN 321
F G +V + R KGFGFV +S+ EA A+ N
Sbjct: 313 EFSPYGTITSAKVMTEGGRSKGFGFVCFSSPEEATKAVTEMN 354
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 121/268 (45%), Gaps = 39/268 (14%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIR----KDKSSYGFIHYFDRRSAAMAILS 113
S+YVG++H VTE +L E FS GP+ ++ R + Y +I++ A A+ +
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPIMSIRVCRDVATRRSLGYAYINFQQPADAERALDT 71
Query: 114 LNGRHLFGQPIKVNWAYAS-GQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDAR 172
+N + G+PI++ W+ G R+ SG N+F+ +L + + L+ FS + + +
Sbjct: 72 MNFEVIKGRPIRIMWSQRDPGLRK--SGVGNVFIKNLDDSIDNKALYDTFSAFGNILSCK 129
Query: 173 VMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSSD 232
V+ D+ SRG+GFV F + A AI + G L R++ + E +
Sbjct: 130 VVCDENG--SRGYGFVHFETHEAATRAIETMNGMLLNDRKV---FVGHFKSRKEREAEVG 184
Query: 233 AKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIE 292
A+++ ++T VY+ N ++ L F G +
Sbjct: 185 ARAI------------------------EFTNVYIKNFGDDMDDDRLREIFSRFGKTLSV 220
Query: 293 EVRVQ---RDKGFGFVRYSTHAEAALAI 317
+V + R KGFGFV + H EA A+
Sbjct: 221 KVMMDNNGRSKGFGFVNFEKHEEAQKAV 248
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 85/181 (46%), Gaps = 20/181 (11%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDK---SSYGFIHYFDRRSAAMAILSL 114
+VY+ N + + L+E+FS G K++ + +GF+++ A A+ +
Sbjct: 192 NVYIKNFGDDMDDDRLREIFSRFGKTLSVKVMMDNNGRSKGFGFVNFEKHEEAQKAVADM 251
Query: 115 NGRHLFGQPIKVNWAYASGQREDTSGH---------------FNIFVGDLSPEVTDATLF 159
NG+ + G+ + V A +R+ N++V +L + D L
Sbjct: 252 NGKEINGRLLYVGRAQKRLERQSELKRKFEQMKQERVNRYQGVNLYVKNLDDGIDDERLR 311
Query: 160 ACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT 219
FS Y + + A+VM + GRS+GFGFV F + ++A A+ ++ G+ + ++ + A
Sbjct: 312 KEFSPYGTITSAKVMTE--GGRSKGFGFVCFSSPEEATKAVTEMNGRIVSTKPLYVALAQ 369
Query: 220 K 220
+
Sbjct: 370 R 370
>gi|62898205|dbj|BAD97042.1| splicing factor 3b, subunit 4 variant [Homo sapiens]
Length = 424
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 104/194 (53%), Gaps = 10/194 (5%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS-----YGFIHYFDRRSAAMAIL 112
+VYVG + +V+EPLL E+F GPV + KD+ + YGF+ + A AI
Sbjct: 14 TVYVGGLDEKVSEPLLWELFLQAGPVVNTHM-PKDRVTGQHQGYGFVEFLSEEDADYAIK 72
Query: 113 SLNGRHLFGQPIKVNWAYASGQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSC-SDA 171
++ L+G+PI+VN A A + D NIF+G+L PE+ + L+ FS +
Sbjct: 73 IMDMIKLYGKPIRVNKASAHNKNLDVGA--NIFIGNLDPEIDEKLLYDTFSAFGVILQTP 130
Query: 172 RVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSS 231
++M D TG S+G+ F++F + + +AI + G++L +R I ++A K E + S
Sbjct: 131 KIMRDPDTGNSKGYAFINFASFDASDAAIEAMNGQYLCNRPITVSYAFKKDSKGE-RHGS 189
Query: 232 DAKSVVELTNGSSE 245
A+ ++ N S+
Sbjct: 190 AAERLLAAQNPLSQ 203
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 48/216 (22%), Positives = 96/216 (44%), Gaps = 44/216 (20%)
Query: 131 ASGQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSF 190
A+G + + ++VG L +V++ L+ F + + D+ TG+ +G+GFV F
Sbjct: 2 AAGPISERNQDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEF 61
Query: 191 RNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKET 250
+++DA AI + L + IR N K + +N++ L G++
Sbjct: 62 LSEEDADYAIKIMDMIKLYGKPIRVN---KASAHNKN-----------LDVGAN------ 101
Query: 251 TNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRD------KGFGF 304
+++GNL PE+ + L+ F + G +++ ++ RD KG+ F
Sbjct: 102 --------------IFIGNLDPEIDEKLLYDTFSAFGV-ILQTPKIMRDPDTGNSKGYAF 146
Query: 305 VRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSK 340
+ +++ + AI+ N YL + + S+ K
Sbjct: 147 INFASFDASDAAIEAMN---GQYLCNRPITVSYAFK 179
>gi|432865704|ref|XP_004070572.1| PREDICTED: embryonic polyadenylate-binding protein-like [Oryzias
latipes]
Length = 624
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/282 (27%), Positives = 129/282 (45%), Gaps = 27/282 (9%)
Query: 49 PGFDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRRS 106
P S ++++ NI + L + FS+ G + CK++ ++ S YGF+H+ + +
Sbjct: 91 PALRKSGVGNIFIKNIDDSIDNKALYDTFSAFGNILSCKVVCDERGSKGYGFVHFETQEA 150
Query: 107 AAMAILSLNGRHLFGQPIKVNWAYASGQREDTSG-----HFNIFVGDLSPEVTDATLFAC 161
A AI ++NG L + + V + +RE G NI++ + +TD L
Sbjct: 151 ANRAIETMNGMLLNDRKVFVGHFKSRKEREVEFGTKVMKFTNIYIKNFGDNLTDEKLKEA 210
Query: 162 FSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKG 221
FS + RVM D+K GRSRGFGFV++ + +DAQ A++++ GK + + I A K
Sbjct: 211 FSAFGKTLSVRVMRDEK-GRSRGFGFVNYAHHEDAQKAVDEMNGKEMNGKIIYVGRAQK- 268
Query: 222 AGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHR 281
++Q + +L + Q +YV NL + L +
Sbjct: 269 ---RLERQGELKRKFDQLKQDRIQ-------------RYQGVNLYVKNLDDSIDDERLRK 312
Query: 282 HFHSLGAGVIEEVRVQ--RDKGFGFVRYSTHAEAALAIQMGN 321
F G +V + + KGFGFV +S+ EA A+ N
Sbjct: 313 EFSPYGTITSAKVMTEAGQSKGFGFVCFSSPEEATKAVTEMN 354
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/276 (26%), Positives = 129/276 (46%), Gaps = 47/276 (17%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIR----KDKSSYGFIHYFDRRSAAMAILS 113
S+YVG++H VTE +L + FS GP+ ++ R + Y +I++ A A+ +
Sbjct: 12 SLYVGDLHPDVTEAMLYQKFSPAGPIVSIRVCRDIITRRSLGYAYINFQQPADAECALDT 71
Query: 114 LNGRHLFGQPIKVNWAYASGQRE---DTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSD 170
+N + G+PI++ W+ QR+ SG NIF+ ++ + + L+ FS + +
Sbjct: 72 MNYDVIKGRPIRIMWS----QRDPALRKSGVGNIFIKNIDDSIDNKALYDTFSAFGNILS 127
Query: 171 ARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQS 230
+V+ D++ S+G+GFV F Q+ A AI + G L R++ G+ + ++
Sbjct: 128 CKVVCDERG--SKGYGFVHFETQEAANRAIETMNGMLLNDRKV-------FVGHFKSRKE 178
Query: 231 SDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGV 290
+ E G + ++T +Y+ N +T L F + G +
Sbjct: 179 REV-----------EFGTKVM---------KFTNIYIKNFGDNLTDEKLKEAFSAFGKTL 218
Query: 291 IEEVRVQRD-----KGFGFVRYSTHAEAALAIQMGN 321
VRV RD +GFGFV Y+ H +A A+ N
Sbjct: 219 --SVRVMRDEKGRSRGFGFVNYAHHEDAQKAVDEMN 252
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 90/181 (49%), Gaps = 20/181 (11%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS---YGFIHYFDRRSAAMAILSL 114
++Y+ N +T+ L+E FS+ G +++R +K +GF++Y A A+ +
Sbjct: 192 NIYIKNFGDNLTDEKLKEAFSAFGKTLSVRVMRDEKGRSRGFGFVNYAHHEDAQKAVDEM 251
Query: 115 NGRHLFGQPIKVNWAYASGQRE-DTSGHF--------------NIFVGDLSPEVTDATLF 159
NG+ + G+ I V A +R+ + F N++V +L + D L
Sbjct: 252 NGKEMNGKIIYVGRAQKRLERQGELKRKFDQLKQDRIQRYQGVNLYVKNLDDSIDDERLR 311
Query: 160 ACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT 219
FS Y + + A+VM + G+S+GFGFV F + ++A A+ ++ G+ + ++ + A
Sbjct: 312 KEFSPYGTITSAKVMTE--AGQSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQ 369
Query: 220 K 220
+
Sbjct: 370 R 370
>gi|357146461|ref|XP_003574000.1| PREDICTED: splicing factor 3B subunit 4-like [Brachypodium
distachyon]
Length = 359
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 61/169 (36%), Positives = 94/169 (55%), Gaps = 9/169 (5%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS-----YGFIHYFDRRSAAMAIL 112
+ YVGN+ QV+E LL E+F GPV + KD+ + YGF+ + A AI
Sbjct: 26 TTYVGNLDPQVSEELLWELFVQAGPVVNV-YVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
Query: 113 SLNGRHLFGQPIKVNWAYASGQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPS-CSDA 171
LN L+G+PI+VN A + D N+F+G+L PEV + L+ FS + ++
Sbjct: 85 ILNMLKLYGKPIRVNKASQDKKSLDVGA--NLFIGNLDPEVDEKLLYDTFSAFGVIVTNP 142
Query: 172 RVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATK 220
++M D +TG SRGFGFVS+ + + + AI + + L +R I ++A K
Sbjct: 143 KIMRDPETGNSRGFGFVSYDSFESSDQAIEAMNNQHLCNRPITVSYAYK 191
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 90/202 (44%), Gaps = 44/202 (21%)
Query: 145 FVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLT 204
+VG+L P+V++ L+ F + V D+ T +G+GFV FR+++DA AI L
Sbjct: 28 YVGNLDPQVSEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKILN 87
Query: 205 GKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTT 264
L + IR N A+ +DK+S D +
Sbjct: 88 MLKLYGKPIRVNKAS------QDKKSLDVGA----------------------------N 113
Query: 265 VYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRD------KGFGFVRYSTHAEAALAIQ 318
+++GNL PEV + L+ F + G ++ ++ RD +GFGFV Y + + AI+
Sbjct: 114 LFIGNLDPEVDEKLLYDTFSAFGV-IVTNPKIMRDPETGNSRGFGFVSYDSFESSDQAIE 172
Query: 319 MGNTTQSSYLFGKQMKCSWGSK 340
N + +L + + S+ K
Sbjct: 173 AMN---NQHLCNRPITVSYAYK 191
Score = 41.6 bits (96), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 47/86 (54%), Gaps = 11/86 (12%)
Query: 261 QYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDK------GFGFVRYSTHAEAA 314
Q T YVGNL P+V++ L F + AG + V V +D+ G+GFV + + +A
Sbjct: 23 QDATTYVGNLDPQVSEELLWELF--VQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDAD 80
Query: 315 LAIQMGNTTQSSYLFGKQMKCSWGSK 340
AI++ N + L+GK ++ + S+
Sbjct: 81 YAIKILNMLK---LYGKPIRVNKASQ 103
>gi|53754|emb|CAA46522.1| poly(A) binding protein [Mus musculus]
Length = 636
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/283 (27%), Positives = 131/283 (46%), Gaps = 31/283 (10%)
Query: 52 DPSTCRS----VYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRR 105
DPS +S +++ N+ + L + FS+ G + CK++ + S YGF+H+ +
Sbjct: 90 DPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQE 149
Query: 106 SAAMAILSLNGRHLFGQPIKVNWAYASGQREDTSG-----HFNIFVGDLSPEVTDATLFA 160
+A AI +NG L + + V + +RE G N+++ + ++ D L
Sbjct: 150 AAERAIEKMNGMLLNDRKVFVGRFKSQKEREAELGARAKEFTNVYIKNFGEDMDDERLKE 209
Query: 161 CFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATK 220
F + +VM D+ +G+S+GFGFVSF +DAQ A++++ GK L +QI A K
Sbjct: 210 LFGKFGPALSVKVMTDE-SGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQK 268
Query: 221 GAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLH 280
++Q+ + E K+ T Q +YV NL + L
Sbjct: 269 KV----ERQTELKRKF--------EQMKQDRITRY-----QGVNLYVKNLDDGIDDERLR 311
Query: 281 RHFHSLGAGVIEEVRVQ--RDKGFGFVRYSTHAEAALAIQMGN 321
+ F G +V ++ R KGFGFV +S+ EA A+ N
Sbjct: 312 KEFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMN 354
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/295 (26%), Positives = 134/295 (45%), Gaps = 50/295 (16%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIR----KDKSSYGFIHYFDRRSAAMAILS 113
S+YVG++H VTE +L E FS GP+ ++ R + Y ++++ A A+ +
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 114 LNGRHLFGQPIKVNWAYASGQREDT---SGHFNIFVGDLSPEVTDATLFACFSVYPSCSD 170
+N + G+P+++ W+ QR+ + SG NIF+ +L + + L+ FS + +
Sbjct: 72 MNFDVIKGKPVRIMWS----QRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 171 ARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQS 230
+V+ D+ S+G+GFV F Q+ A+ AI + G L R++ G + ++
Sbjct: 128 CKVVCDENG--SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFV-------GRFKSQKE 178
Query: 231 SDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGV 290
+A EL + E +T VY+ N ++ L F G +
Sbjct: 179 REA----ELGARAKE----------------FTNVYIKNFGEDMDDERLKELFGKFGPAL 218
Query: 291 IEEVRVQRD-----KGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSK 340
V+V D KGFGFV + H +A A+ N + L GKQ+ K
Sbjct: 219 --SVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKE---LNGKQIYVGRAQK 268
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 86/181 (47%), Gaps = 20/181 (11%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS---YGFIHYFDRRSAAMAILSL 114
+VY+ N + + L+E+F GP K++ + +GF+ + A A+ +
Sbjct: 192 NVYIKNFGEDMDDERLKELFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEM 251
Query: 115 NGRHLFGQPIKVNWAYASGQRE------------DTSGHF---NIFVGDLSPEVTDATLF 159
NG+ L G+ I V A +R+ D + N++V +L + D L
Sbjct: 252 NGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLR 311
Query: 160 ACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT 219
FS + + + A+VM + GRS+GFGFV F + ++A A+ ++ G+ + ++ + A
Sbjct: 312 KEFSPFGTITSAKVMME--GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQ 369
Query: 220 K 220
+
Sbjct: 370 R 370
>gi|431894424|gb|ELK04224.1| Polyadenylate-binding protein 1-like protein [Pteropus alecto]
Length = 512
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/273 (28%), Positives = 126/273 (46%), Gaps = 44/273 (16%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIR----KDKSSYGFIHYFDRRSAAMAILS 113
S+YVG++H VTE +L E FS GP+ ++ R + Y +I++ A A+ +
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADAERALDT 71
Query: 114 LNGRHLFGQPIKVNWAYAS-GQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDAR 172
+N + GQPI++ W+ G R+ SG NIF+ +L + + L+ FS + + +
Sbjct: 72 MNFEVIKGQPIRIMWSQRDPGLRK--SGVGNIFIKNLEDSIDNKALYDTFSTFGNILSCK 129
Query: 173 VMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQSSD 232
V+ D SRGFGFV F + AQ AI+ + G L R++ G+ + +Q +
Sbjct: 130 VVCDDHG--SRGFGFVHFETHEAAQLAISTMNGMLLNDRKVFV-------GHFKSRQERE 180
Query: 233 AKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSL---GAG 289
A E ++T +YV NL ++ + L F G
Sbjct: 181 A--------------------ELGARAMEFTNIYVKNLQVDMDEWGLQELFSQFDWSSPG 220
Query: 290 VIEEVRVQRD-----KGFGFVRYSTHAEAALAI 317
+ V+V RD +GFGFV + H EA A+
Sbjct: 221 KMLSVKVMRDDSGHSRGFGFVNFEKHEEAQKAV 253
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 125/287 (43%), Gaps = 30/287 (10%)
Query: 49 PGFDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRRS 106
PG S ++++ N+ + L + FS+ G + CK++ D S +GF+H+ +
Sbjct: 91 PGLRKSGVGNIFIKNLEDSIDNKALYDTFSTFGNILSCKVVCDDHGSRGFGFVHFETHEA 150
Query: 107 AAMAILSLNGRHLFGQPIKVNWAYASGQREDTSG-----HFNIFVGDLSPEVTDATLFAC 161
A +AI ++NG L + + V + +RE G NI+V +L ++ + L
Sbjct: 151 AQLAISTMNGMLLNDRKVFVGHFKSRQEREAELGARAMEFTNIYVKNLQVDMDEWGLQEL 210
Query: 162 FSVYPSCS-----DARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCN 216
FS + S +VM D +G SRGFGFV+F ++AQ A+ D+ GK + R +
Sbjct: 211 FSQFDWSSPGKMLSVKVMRDD-SGHSRGFGFVNFEKHEEAQKAVMDMNGKEVRGRLLYVG 269
Query: 217 WATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQ 276
A K +E N ++ + + +YV NL +
Sbjct: 270 RAQKR---------------MERQNELKRKFEQMKQDRLNRYHVRGVNLYVKNLDDSIND 314
Query: 277 LDLHRHFHSLGAGVIEEVRVQ--RDKGFGFVRYSTHAEAALAIQMGN 321
L + F G +V + KGFGFV +S+ EA A+ N
Sbjct: 315 EKLRKEFSPYGMITSAKVMTEGGHSKGFGFVCFSSPEEATKAVTEMN 361
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 90/188 (47%), Gaps = 27/188 (14%)
Query: 58 SVYVGNIHTQVTEPLLQEVFS-----STGPVEGCKLIRKDK---SSYGFIHYFDRRSAAM 109
++YV N+ + E LQE+FS S G + K++R D +GF+++ A
Sbjct: 192 NIYVKNLQVDMDEWGLQELFSQFDWSSPGKMLSVKVMRDDSGHSRGFGFVNFEKHEEAQK 251
Query: 110 AILSLNGRHLFGQPIKVNWAYASGQREDTSGH-----------------FNIFVGDLSPE 152
A++ +NG+ + G+ + V A +R++ N++V +L
Sbjct: 252 AVMDMNGKEVRGRLLYVGRAQKRMERQNELKRKFEQMKQDRLNRYHVRGVNLYVKNLDDS 311
Query: 153 VTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQ 212
+ D L FS Y + A+VM + G S+GFGFV F + ++A A+ ++ G+ +G++
Sbjct: 312 INDEKLRKEFSPYGMITSAKVM--TEGGHSKGFGFVCFSSPEEATKAVTEMNGRIVGTKP 369
Query: 213 IRCNWATK 220
+ A +
Sbjct: 370 LYVALAQR 377
>gi|52694662|ref|NP_705947.3| splicing factor 3B subunit 4 [Danio rerio]
gi|34193906|gb|AAH56532.1| Splicing factor 3b, subunit 4 [Danio rerio]
gi|45768679|gb|AAH67655.1| Splicing factor 3b, subunit 4 [Danio rerio]
gi|94733748|emb|CAK11461.1| splicing factor 3b, subunit 4 [Danio rerio]
Length = 400
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 58/169 (34%), Positives = 94/169 (55%), Gaps = 9/169 (5%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS-----YGFIHYFDRRSAAMAIL 112
+VYVG + +V+EPLL E+F GPV + KD+ + YGF+ + A AI
Sbjct: 14 TVYVGGLDEKVSEPLLWELFLQAGPVVNTHM-PKDRVTGQHQGYGFVEFLSEEDADYAIK 72
Query: 113 SLNGRHLFGQPIKVNWAYASGQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDA- 171
+N L+G+PI+VN A A + D NIF+G+L PE+ + L+ FS +
Sbjct: 73 IMNMIKLYGKPIRVNKASAHNKNLDVGA--NIFIGNLDPEIDEKLLYDTFSAFGVILQTP 130
Query: 172 RVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATK 220
++M D TG S+G+ F++F + + +AI + G++L +R I ++A K
Sbjct: 131 KIMRDPDTGNSKGYAFINFASFDASDAAIEAMNGQYLCNRPITVSYAFK 179
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 92/208 (44%), Gaps = 44/208 (21%)
Query: 144 IFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDL 203
++VG L +V++ L+ F + + D+ TG+ +G+GFV F +++DA AI +
Sbjct: 15 VYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYAIKIM 74
Query: 204 TGKWLGSRQIRCNWATKGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYT 263
L + IR N K + +N++ L G++
Sbjct: 75 NMIKLYGKPIRVN---KASAHNKN-----------LDVGAN------------------- 101
Query: 264 TVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRD------KGFGFVRYSTHAEAALAI 317
+++GNL PE+ + L+ F + G +++ ++ RD KG+ F+ +++ + AI
Sbjct: 102 -IFIGNLDPEIDEKLLYDTFSAFGV-ILQTPKIMRDPDTGNSKGYAFINFASFDASDAAI 159
Query: 318 QMGNTTQSSYLFGKQMKCSWGSKPTPPG 345
+ N YL + + S+ K G
Sbjct: 160 EAMN---GQYLCNRPITVSYAFKKDSKG 184
>gi|19705459|ref|NP_599180.1| polyadenylate-binding protein 1 [Rattus norvegicus]
gi|47605941|sp|Q9EPH8.1|PABP1_RAT RecName: Full=Polyadenylate-binding protein 1; Short=PABP-1;
Short=Poly(A)-binding protein 1
gi|12188891|emb|CAC21554.1| poly(A) binding protein [Rattus norvegicus]
gi|52789215|gb|AAH83176.1| Poly(A) binding protein, cytoplasmic 1 [Rattus norvegicus]
gi|149066519|gb|EDM16392.1| rCG60104 [Rattus norvegicus]
Length = 636
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/283 (27%), Positives = 131/283 (46%), Gaps = 31/283 (10%)
Query: 52 DPSTCRS----VYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS--YGFIHYFDRR 105
DPS +S +++ N+ + L + FS+ G + CK++ + S YGF+H+ +
Sbjct: 90 DPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQE 149
Query: 106 SAAMAILSLNGRHLFGQPIKVNWAYASGQREDTSG-----HFNIFVGDLSPEVTDATLFA 160
+A AI +NG L + + V + +RE G N+++ + ++ D L
Sbjct: 150 AAERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKE 209
Query: 161 CFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATK 220
F + +VM D+ +G+S+GFGFVSF +DAQ A++++ GK L +QI A K
Sbjct: 210 LFGKFGPALSVKVMTDE-SGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQK 268
Query: 221 GAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLH 280
++Q+ + E K+ T Q +YV NL + L
Sbjct: 269 KV----ERQTELKRKF--------EQMKQDRITRY-----QGVNLYVKNLDDGIDDERLR 311
Query: 281 RHFHSLGAGVIEEVRVQ--RDKGFGFVRYSTHAEAALAIQMGN 321
+ F G +V ++ R KGFGFV +S+ EA A+ N
Sbjct: 312 KEFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMN 354
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/295 (26%), Positives = 134/295 (45%), Gaps = 50/295 (16%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIR----KDKSSYGFIHYFDRRSAAMAILS 113
S+YVG++H VTE +L E FS GP+ ++ R + Y ++++ A A+ +
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 114 LNGRHLFGQPIKVNWAYASGQREDT---SGHFNIFVGDLSPEVTDATLFACFSVYPSCSD 170
+N + G+P+++ W+ QR+ + SG NIF+ +L + + L+ FS + +
Sbjct: 72 MNFDVIKGKPVRIMWS----QRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 171 ARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGNNEDKQS 230
+V+ D+ S+G+GFV F Q+ A+ AI + G L R++ G + ++
Sbjct: 128 CKVVCDENG--SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFV-------GRFKSRKE 178
Query: 231 SDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGV 290
+A EL + E +T VY+ N ++ L F G +
Sbjct: 179 REA----ELGARAKE----------------FTNVYIKNFGEDMDDERLKELFGKFGPAL 218
Query: 291 IEEVRVQRD-----KGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSK 340
V+V D KGFGFV + H +A A+ N + L GKQ+ K
Sbjct: 219 --SVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKE---LNGKQIYVGRAQK 268
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 86/181 (47%), Gaps = 20/181 (11%)
Query: 58 SVYVGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKDKSS---YGFIHYFDRRSAAMAILSL 114
+VY+ N + + L+E+F GP K++ + +GF+ + A A+ +
Sbjct: 192 NVYIKNFGEDMDDERLKELFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEM 251
Query: 115 NGRHLFGQPIKVNWAYASGQRE------------DTSGHF---NIFVGDLSPEVTDATLF 159
NG+ L G+ I V A +R+ D + N++V +L + D L
Sbjct: 252 NGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLR 311
Query: 160 ACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT 219
FS + + + A+VM + GRS+GFGFV F + ++A A+ ++ G+ + ++ + A
Sbjct: 312 KEFSPFGTITSAKVMME--GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQ 369
Query: 220 K 220
+
Sbjct: 370 R 370
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.316 0.131 0.393
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,878,300,123
Number of Sequences: 23463169
Number of extensions: 306904026
Number of successful extensions: 2286428
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 13522
Number of HSP's successfully gapped in prelim test: 8316
Number of HSP's that attempted gapping in prelim test: 2160207
Number of HSP's gapped (non-prelim): 97450
length of query: 415
length of database: 8,064,228,071
effective HSP length: 145
effective length of query: 270
effective length of database: 8,957,035,862
effective search space: 2418399682740
effective search space used: 2418399682740
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 78 (34.7 bits)